LOCUS       DATIML010000001         1921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5486424, whole genome shotgun sequence.
ACCESSION   DATIML010000001 DATIML010000000
VERSION     DATIML010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5486424"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..621
                     /locus_tag="VLJ38_00005"
     CDS             16..621
                     /locus_tag="VLJ38_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HSU37903.1"
                     /translation="MRARASAVAPLAALSARRAAVELVSDRRHYEEIVVRAIGAARAS
                     VWIATANLKDVHIEAPIGTRARAQGRYYSIVERFVELGRQGVELRILHGALPSRRFRA
                     SLARAKELKAPRFELRHCPRVHLKMVAVDGAYLYLGSANFTGAGLGAKDDGRRNFELG
                     VSTDDDVLLDATQQRFDRIFSGKECGACKLRSLCPKPLDLR"
     gene            complement(637..1782)
                     /gene="add"
                     /locus_tag="VLJ38_00010"
     CDS             complement(637..1782)
                     /gene="add"
                     /locus_tag="VLJ38_00010"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HSU37904.1"
                     /translation="MALPESPVPFETFRALPKTDLHVHLDGSLRLETILDIAKADGIE
                     LPATDAAGLRAAIGCGAQFGSLVEYLRGFDITLRVMQTEAALERIAFELAEDAHRENV
                     RYMEVRYAPMLHTRRGLKLTRVIEAVLDGLRRARETFGIKANVIVCGIRNISPESSYQ
                     MAELAVAYKGGGVVGFDLAGAEADFPAKHHRQAFQLVRDNNINCTIHAGEAYGPESIA
                     QAIHVCGAHRIGHGCRLREHGDLLHYVIDHRVPLECCPSSNVQTGAVKTLASHPLKLY
                     FDLGLRVTVNTDNRLITDTSVSKELHLVHREMGVPFADIKAMILAGFKSSFQPFHEKQ
                     AMIRRVIAELERYDDDGVQQAPSAAPVHFSERPPRVRMSASLRPDAE"
BASE COUNT          298 a          610 c          665 g          348 t
ORIGIN      
        1 cggtacgctg ctttagtgcg tgcccgtgcg tccgccgttg ctccgctcgc ggctctgagc
       61 gcgcgccgcg cggcggtcga gctcgtgagt gaccggcggc actacgaaga gatcgtcgtg
      121 cgggcgatcg gggccgctcg agcgtcggtg tggatcgcga ctgcgaattt gaaagacgtg
      181 cacatcgagg cgccgattgg gacgcgcgcc cgcgcgcagg ggcgctacta ctcgatcgtg
      241 gagcgcttcg tcgagctcgg gcggcagggc gtcgagctcc ggattttgca cggcgcgctg
      301 ccgtcgcgtc gctttcgggc gtcgctcgcg cgcgcgaaag agctcaaagc cccgcgcttc
      361 gagctcaggc attgcccccg cgtgcacctc aaaatggtcg cggtcgacgg cgcctatctt
      421 tacctcggta gcgcgaactt cacgggcgcg ggactcggcg cgaaggacga cggtcgccgc
      481 aacttcgagc tcggcgtttc gacggacgac gacgtgctgc tcgatgcgac gcagcagcgc
      541 ttcgatcgca tcttttcggg caaggagtgc ggcgcctgca agctccgcag cttgtgcccg
      601 aagccgctcg acctgcgctg aggtgcgcgg gtcgtcttat tcggcgtccg gccgcaagct
      661 cgcgctcatg cgcacgcgcg gcggccgctc ggagaagtgt accggcgctg cgctcggagc
      721 ctgctgcacg ccgtcgtcgt cgtagcgttc gagctcggcg atcacgcgcc ggatcatggc
      781 ctgtttctcg tgaaacggct gaaagctcga cttgaacccc gcgaggatca tcgccttgat
      841 gtcggcgaac ggcacgccca tctcgcgatg cacgagatga agctccttcg acacgctggt
      901 gtcggtgatc aagcgattgt ccgtgttgac ggtcacgcga agcccgagat cgaaatagag
      961 cttgagcggg tgcgaggcga gcgtcttgac cgcgccggtc tgcacgttgc tcgacggaca
     1021 gcattcgagc gggacgcgat gatcgatcac gtagtgcaac agatcgccgt gctcgcgcag
     1081 ccggcaaccg tggccgatgc ggtgcgcgcc gcagacgtga atcgcctgcg cgatcgattc
     1141 ggggccgtac gcttcccccg cgtggatcgt gcaattgatg ttgttgtcgc gcacgagctg
     1201 gaaagcctgg cggtggtgct tggcgggaaa gtccgcctcc gcgccggcca gatcgaagcc
     1261 gaccacaccg ccgcccttgt aggcgaccgc gagctcggcc atttggtacg acgactcggg
     1321 cgagatgttg cgaatgccgc aaacgatgac gttcgccttg atgccgaagg tctcgcgcgc
     1381 gcggcgcagg ccgtcgagca ccgcctcgat cacgcgcgtg agcttcaaac cgcgtcgcgt
     1441 gtgcagcatc ggcgcgtagc gcacctccat gtagcgcacg ttctcgcggt gcgcgtcttc
     1501 ggcgagctcg aaggcgatgc gctcgagcgc cgcttcggtt tgcatgacgc gcagcgtgat
     1561 gtcgaagccg cgcaaatatt cgacgagcga gccgaattgg gcgccgcagc cgatcgcggc
     1621 gcgcaggccc gcggcgtcgg tcgcggggag ctcgatgccg tcggccttcg cgatgtcgag
     1681 aatcgtctcg agccggagcg agccgtcgag atggacgtga agatccgttt tgggtagcgc
     1741 ccgaaacgtc tcgaacggga cggggctttc ggggagtgcc atggtcgagt gtaccactcg
     1801 aagtgtcacc ttgccgctcg cgccttgcct gcgggggcgg ctctcgggta actatgaaag
     1861 attaggagga cccatgcgcc gtcccatatt ccaggctctc acctttgccg ctgctgcttc
     1921 a
//
LOCUS       DATIML010000002         3862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4042677, whole genome shotgun sequence.
ACCESSION   DATIML010000002 DATIML010000000
VERSION     DATIML010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3862
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4042677"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..2221)
                     /locus_tag="VLJ38_00015"
     CDS             complement(23..2221)
                     /locus_tag="VLJ38_00015"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HSU37905.1"
                     /translation="MNDERPFWRTPSVLLSLAALVVLVITDAVLRHLGGKPADFTLFV
                     GRFHPLVVHLPIGFILLVGAAEAATLSPRLRPRIDSTVALALPLVVAATATAFVLGHL
                     LARSGDFAPNALSVHRRFELFASVGICLCPLAWEYQAYTQSERARWLYRALLGVALGV
                     LSLGAHFGGTLTRGDTYLTRYAPEPLKRLLGATVAPRAPASAAATAAAREPRLFGDVI
                     QPILKERCVSCHGEEKSKGGLRLDSLASVMKGGEDGAVVTPGNPSDSPLLGRVLLPEN
                     DDDHMPPEGKPGLTPPEIAAVRFWIERGASDTLLVRDLLAPLDARSLLEHALAGSAPA
                     TTPTKVASQRNAAASSASSPPAPPPTPPANSRPTASTTAATATTTATPAKAPGSATPS
                     GLFSEHCVKCHGPEKQKGKLRVDSLAALLQGGKSGPAIVPGDARASTLVKRLNLSPDD
                     DKHMPPAKEPQLTAREIAMVSGWIAGLDAASRLEGTPRASAPPPASDASVPAKGTHEV
                     APPAKPASDAATPSTPAAPSTPATPNASLTHAAPAPSPELLANLPSRLALFPTEVQPL
                     LRARCASCHGGKTPAGGLEVADYAALLRGGDTGPAVTPGKPDQSLLVHRIRLPRDDDD
                     HMPPTKAPQLTANEIALINAWIEHGGSSTDETALEILPGPAVEAIAAHPPARAPSDVG
                     RASPPPRGGGCGACSVSDRDRAPDRFLVLGALLVAVLCARRRGRSSVISV"
     gene            2316..3236
                     /locus_tag="VLJ38_00020"
     CDS             2316..3236
                     /locus_tag="VLJ38_00020"
                     /inference="COORDINATES: protein motif:HMM:NF013328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HSU37906.1"
                     /translation="MPELPDVELYLSALEPRIVGRRLERVRLFSPFVLRSFDPPLASV
                     SGERVGGLRRLGKRIVMELGGDLFLVIHLMIAGRFQWFEPPPKPETKPGGKIALAAFD
                     FEHATLAFTEASKKKRASLYVVRGEAGLRDHDPGGLDPLRIDLDTFREALTRENHTVK
                     RTLTDPRVFSGIGNAYSDEILHRAQLSPLKWTTRLEPDELERLHAAVGSVLREWVERL
                     RAETGDAFPTKVTAFRPEMAVHGKYRQPCPVCGAPVQRIVYAENEANYCARCQTGGKV
                     LADRSLSQLLKDDWPRTLEDWEAMRKPRAD"
     gene            complement(3625..>3862)
                     /locus_tag="VLJ38_00025"
     CDS             complement(3625..>3862)
                     /locus_tag="VLJ38_00025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37907.1"
                     /translation="SKVHPATPPPPASPARPATPPRPSPETPALALRPAEPPGAPPPR
                     ALLLPAKPLVPAEPLEPAVVPMPNVPALPPAVPL"
BASE COUNT          571 a         1266 c         1442 g          583 t
ORIGIN      
        1 tcgcgcgtcg agggtcgtgc agctaaaccg aaatgaccga gctccggcca cggcgccgag
       61 cgcagaggac ggcaacgagt aacgcgccca gcactaggaa acggtccggt gcccggtcgc
      121 ggtcgctgac gctgcacgcg ccgcatccgc ccccgcgtgg tggcgggctc gctcgaccga
      181 cgtcgctcgg agcacgggcc ggcggatggg cggcgatcgc ttcgacggcg ggtcccggca
      241 ggatttcgag cgcggtttcg tccgtcgagc tcccgccgtg ctcgatccag gcgttgatga
      301 gcgcgatctc gttcgctgtg agctgggggg ccttggtcgg tggcatgtgg tcgtcgtcgt
      361 cccgaggcag acggatgcga tgaacgagca ggctctggtc gggcttgcca ggcgtgacgg
      421 ctggaccggt atcgccgccg cggaggagcg ccgcgtaatc ggcaacctcg aggccgccgg
      481 ccggcgtctt gccgccgtgg caagacgcac agcgggcacg caagagcggc tgaacttccg
      541 tggggaagag cgcgaggcgc gacggtaggt tggcgagcaa ctcgggtgag ggtgctggcg
      601 cagcgtgcgt gagtgacgcg ttcggggtgg ccggtgtgct cggcgcggcc ggcgtgctcg
      661 gggtggcggc atcgctcgct ggcttcgccg gaggcgcgac ttcgtgggtg cccttcgccg
      721 gcacggaagc gtcggacgct ggtggaggcg cgcttgcgcg gggcgtgcct tccagccgcg
      781 aggcagcgtc gagtcccgcg atccagccgc tcaccatcgc gatttcacgc gccgtgagct
      841 gcggttcctt ggcgggcggc atgtgcttgt cgtcgtcggg actcaggttg aggcgcttca
      901 ccagcgtgct cgctcgagca tcgcccggga caatggcggg accggacttg ccgccttgaa
      961 gcaacgcggc gagcgagtcg acgcgcagct tgcccttttg cttctcgggc ccgtgacact
     1021 tcacgcagtg ctccgaaaaa agcccgctcg gggtggcgct ccccggcgcc ttcgctggcg
     1081 tggctgtcgt cgttgccgtc gctgccgtcg tcgaagccgt cggacgcgaa ttggccggcg
     1141 gggtgggtgg cggcgccggg ggcgagctcg cgctcgacgc ggcggcatta cgctgcgaag
     1201 cgaccttggt gggggtggtc gctggcgccg atccagcaag cgcgtgctcg agcaggctcc
     1261 gagcgtcgag cggggccagc aggtcgcgaa cgagcagcgt gtcgctggca ccgcgctcaa
     1321 tccaaaagcg tacggctgcg atctcgggcg gcgtgagccc cggtttgcct tcgggcggca
     1381 tgtggtcgtc gtcgttctcc ggcaagagca cgcgtccgag caaggggctg tcgctcgggt
     1441 tgccgggcgt gaccacggcg ccgtcttcgc cgcccttcat cacactggcg agcgaatcga
     1501 ggcggaggcc gcccttcgac ttttcctcgc cgtggcacga aacgcagcgc tctttcagga
     1561 tcggctggat cacgtcgccg aaaagtcgcg gttcgcgcgc cgcggctgtt gcggccgcgg
     1621 aggccggcgc tcggggcgcc acggttgcgc caaggagtcg cttgagcggc tcgggcgcgt
     1681 agcgcgtgag ataagtatcg ccgcgtgtga gtgtgccgcc gaaatgcgcg cccagcgaga
     1741 gcacaccgag ggccacgccg aggagggcgc gatacagcca gcgcgcgcgt tcggactgcg
     1801 tgtacgcttg atattcccaa gccagcgggc agaggcagat cccgaccgaa gcaaagagct
     1861 cgaaacgccg gtgcacgctg agcgcgttcg gggcgaagtc gcccgagcgg gcgagcaggt
     1921 gcccgagcac gaacgccgtc gccgtcgccg ccacgacgag cggcagcgcg agcgcgacgg
     1981 tggagtcgat gcgaggccgc aaccgcggcg agagcgtcgc cgcctccgcc gcgccgacga
     2041 gcaggatgaa ccctatcggc aggtgcacga cgagcggatg aaaacgtccg acaaagagcg
     2101 tgaaatcggc gggcttaccg ccaagatgcc ggagcacggc gtcggtgatg acgagcacga
     2161 cgagcgcagc gagcgacagg agcacgctcg gcgtacgcca gaacggacgc tcgtcgttca
     2221 ttcggcgcct cgacggcgac gagctcgaaa cctttggccc aatccagata agtctagccc
     2281 gacggtgtcc gtacgcctgc taatctggcg aggtcatgcc cgagctgccc gacgtggagc
     2341 tctatctgtc ggcgctcgag ccgcgcatcg tcggccggag gctcgagcgt gtccggctgt
     2401 tttccccctt cgtgctgcgc tcgttcgacc cgccgctcgc gtccgtgagc ggcgaaaggg
     2461 tcggcggcct gcgccggctc ggcaagcgca tcgtgatgga gctcgggggg gacctgttcc
     2521 tcgtcatcca cctgatgatc gcggggcgct ttcagtggtt cgagcctccg cccaagcccg
     2581 aaacgaagcc gggcggaaag attgcgctcg ccgccttcga cttcgagcac gcgacgctcg
     2641 cgttcacgga ggcgagcaag aagaagcgcg cgtcgcttta cgtcgtgcgc ggtgaggcag
     2701 ggctccgcga tcacgatccg ggcggcctcg acccgctccg catcgatctc gacacctttc
     2761 gcgaggcgct cacgcgtgaa aaccacaccg tcaagcgcac cctgaccgac ccgcgcgtct
     2821 tcagcggcat cggcaacgcc tactcggacg agatcctgca ccgcgcgcag ctctcgccgc
     2881 tcaaatggac gacgcgcctc gagcccgacg agctcgaacg ccttcacgcc gcggtcggca
     2941 gcgtgctccg cgaatgggtc gaacgcctgc gcgccgaaac cggggacgcc tttcccacca
     3001 aagtcaccgc cttccgcccc gagatggcgg tgcacggcaa ataccgccag ccgtgccccg
     3061 tctgcggcgc gcccgtgcag cgcatcgtct acgccgaaaa cgaggccaac tactgcgccc
     3121 gctgtcagac gggcggcaaa gtcctcgccg accgctcgct ctcgcagctg ctcaaagacg
     3181 actggccacg cacgctcgaa gattgggaag cgatgcgcaa gccgcgcgcc gattgagggc
     3241 gcgcgagcag cgttttggct ccgcttgacg ctcatttcgt tcgcgtgaaa ggttcgagca
     3301 catgctggtg gaattctttc gctctttcgg ggggcgggca gcgtcggcgc gctccgccgg
     3361 ggcgtggctg acgctcggca ttctgggcgc gagctgcggg ggacgttcga cggaagtacg
     3421 cgagcgtgac ggcagcgacg gcacgaatgg cagctcaggg acgagcgcgg cagctgcgcc
     3481 gggttcctcg catgctggca cggacgcggt tgggccctcg cacgacagcg gcggcagcaa
     3541 cgtctcgggt tccgggccca gcgttggcgc gcgtcccgcc gcgggtggcg cgacggcgcg
     3601 cggcggcgcg agcggtcggg gaggtcatag cggcacggct ggcgggagcg cggggacgtt
     3661 cggcatcggc accacggcag gctcgagtgg ttcggccggc acgagcggtt tcgccggaag
     3721 cagcagtgcg cggggaggcg gcgcgccagg cggctcggct ggccgtaatg cgagcgcggg
     3781 cgtttcgggc gacggtcgcg gcggtgttgc tggccgcgcg gggctcgccg gcggcggcgg
     3841 ggttgctggg tggaccttcg ag
//
LOCUS       DATIML010000003         3778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4620366, whole genome shotgun sequence.
ACCESSION   DATIML010000003 DATIML010000000
VERSION     DATIML010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3778
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4620366"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VLJ38_00030"
     CDS             complement(<1..354)
                     /locus_tag="VLJ38_00030"
                     /inference="COORDINATES: protein motif:HMM:NF013396.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HSU37908.1"
                     /translation="MTKGPLTLPATAEVSLLHVALALAPFAPRLEGDGSVRVSGVRQD
                     SRRVEPGDLFVARAGEKTSGLDFVPEALRRGAAALLVEQGVDARVFGVPVLEVRDVRR
                     ALGTAAERVYGWPSRA"
     gene            complement(351..2426)
                     /locus_tag="VLJ38_00035"
     CDS             complement(351..2426)
                     /locus_tag="VLJ38_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HSU37909.1"
                     /translation="MIDEAARARWVRVRMGLLSGVLALGLGLVVQSAYSIMIEDGSGW
                     REIAETQRQRRLHVAPKRGAIYDRNGDALAVSVEVPSASLDAVELLRGVVPQKIPLVA
                     RDAANRIGAVLSLDPAPIERKILAKRRFAWLKRQLTAEESEGVRKLASGEDGQEALRG
                     LVVEGEGRRYYPRRELAGSLLGFVAPDGEGKDGLEYSLNDELAGRVEELRGLRDRSGR
                     LLFSEGAQDERALAGHSVTLSIDQGLQHVAEHELAAAVRTFEAAGGSVVAVDPATGEI
                     LALASFPNFNPNDYSESAPEARRMHATSDVFEPGSTTKIFTVSAALAAGTIKPTDKLY
                     CEKGSMPVDNVIIHDTHPSEWLTIAQVLAVSSNICAAKMGLGLGGDKLYETFRRFGFG
                     EETGLGVPGESGGTLRPKGRPWVPVETASAAFGHGIGVTNIQLAMAASAVANGGELMD
                     PILVKKVVTANGELVRETVPHVRRRVIPEHVARSVAELLVAVTEGEGTGVEAAINGYR
                     VAGKTATAQKAEPGTARYSLDRFIASFVGFVPAEKPVIAIAVTIDEPMVEHAGGAVAA
                     PVFRHVAQAALELRGLVPRGTDHADVAVLAHSPDPANAAMEAIRRSQGKRPAIQEGTV
                     ATGPVPAGKLRIPDMTGWPAREALKRSFELGVTPRLSGSGLLVSQTPAPGAVMDKGQE
                     LMLVFEPAS"
     gene            complement(2423..2773)
                     /locus_tag="VLJ38_00040"
     CDS             complement(2423..2773)
                     /locus_tag="VLJ38_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37910.1"
                     /translation="MRNERTFLVLWTLAVSAATAAFVLHLSLRVRAVELGYELGRTHA
                     HIARLREVKRVLELELSSHKTPERVEFVARTLLGMSEPPPDRILPAGPLPAEPDAPAV
                     TAASAAAPTEEQAP"
     gene            complement(2770..3705)
                     /gene="rsmH"
                     /locus_tag="VLJ38_00045"
     CDS             complement(2770..3705)
                     /gene="rsmH"
                     /locus_tag="VLJ38_00045"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HSU37911.1"
                     /translation="MMAAARIDSEPAFIHTPVMLAEVLAAFSELSDGVMVDVTAGGAG
                     HSAALLRALPCVRLLAFDRDPRAVAAATAVLAPFGERARVEHAAFSEVGEALVAAGIT
                     RIDALLADLGVSSEQLTDPERGMSFRTAGPIDMRMDPTRGETARELIERVSQEELADL
                     IFELGDERASRRIARCIKQALAAERLADTLDLRRAVVRAVGPRRVGGVDPATRTFQAL
                     RIAVNGEHTELRALLSLARGRVRSGGLAAFISFHSAEDRAVKREFVGRSEWEPLTKKP
                     QVPSELEIEHNLRSRSAKLRTARRVPPSGPGEEPA"
BASE COUNT          550 a         1362 c         1328 g          538 t
ORIGIN      
        1 cgctcgactg ggccagccgt acacccgctc ggccgccgtg ccgagcgcgc ggcgcacgtc
       61 acggacctcg agcacgggca ccccgaacac gcgcgcgtcc acgccctgtt cgacgagcaa
      121 ggccgccgcg ccgcgccgga gcgcttcggg tacgaaatcc aagccgctcg tcttttcacc
      181 cgcgcgcgcg acgaacaggt cgcccggctc gacgcgacgc gagtcttggc gcacgcccga
      241 gacgcgcacg ctgccgtcgc cctcgagccg cggcgcaaac ggcgcgagcg cgagcgccac
      301 gtgcagcagg ctcacctccg cggtggcggg cagggtcaag gggcccttgg tcatgaggcg
      361 ggctcgaaca cgagcatgag ctcctgcccc ttatccatga cggcgccggg cgccggcgtc
      421 tgactcacga gcaatccgct acccgagagg cgcggcgtga cgccgagctc gaacgaacgc
      481 ttgagcgcct cgcgcgcagg ccaaccggtc atgtccggga tgcgcagctt gcctgccgga
      541 acggggccgg tcgcgaccgt accttcctga atcgccgggc gtttgccctg agagcgccgg
      601 atggcttcca tagcggcgtt ggccggatcg gggctgtgtg ccagcacggc gacatcggcg
      661 tggtcggtac cgcgcggcac gagtccgcgg agctcgagcg ccgcctgcgc gacgtggcgg
      721 aacacgggcg cggcgacggc gcctcccgcg tgctcgacca tcggctcgtc gatcgtgacc
      781 gcgatagcaa tcaccggctt ttcggcgggc acgaaaccaa cgaacgaagc gatgaagcgg
      841 tcgagcgagt agcgcgccgt gccgggctct gccttctgtg ccgtcgcggt cttgcccgcg
      901 acgcgatagc cgttgatcgc ggcttcgacg cccgtgccct cgccttccgt gacggcgacg
      961 agcagctcgg caacgctgcg cgcgacgtgc tcggggatca cgcggcgcct gacgtgcggc
     1021 accgtctcgc gcacgagctc gccgttcgcc gtcacgacct tcttcacgag gatgggatcc
     1081 atcagctcgc cgccgttggc gacggccgag gccgccatgg caagctggat gttcgtgacg
     1141 ccgatgccgt gaccgaacgc ggccgaagcc gtttcgaccg gcacccaggg ccgccctttc
     1201 ggcctcagcg tcccgccgga ttcgcccggc acgccgaggc ccgtctcttc gccgaagcca
     1261 aaacggcgga aggtctcgta gagtttgtcg ccgccgaggc cgaggcccat cttcgcggcg
     1321 cagatgttcg aggaaacggc gagcacctgg gcgatcgtca gccactccga ggggtgagtg
     1381 tcgtggatga tgacgttgtc gaccggcatg ctgccttttt cgcagtagag cttgtccgtc
     1441 ggtttgatcg tgccggcggc gagcgcggcc gagacggtga agattttggt ggtggagccg
     1501 ggctcgaaca cgtcggaggt cgcgtgcatc cgccgggcct cgggcgcgct ctccgaataa
     1561 tcgttggggt tgaagttcgg aaagctcgcg agcgcgagga tttcgcccgt cgcggggtcg
     1621 accgcgacga ccgagccgcc cgccgcctcg aaggtgcgca cggccgcggc aagctcgtgc
     1681 tcggcgacgt gctgcagccc ctggtcgatg ctgagcgtca cgctgtggcc ggcgagcgcg
     1741 cgctcgtcct gcgcgccctc ggagaacaac agccggcccg agcgatcgcg tagaccacgg
     1801 agctcctcga cgcgcccggc gagctcgtcg ttcagcgagt actcgagccc gtctttgcct
     1861 tcaccgtccg gcgcgacgaa gccgagcaag gagccggcga gctcgcggcg cgggtaatag
     1921 cgccggccct cgccttcgac gacgagtccg cgcaaggctt cctgaccgtc ctcaccgctc
     1981 gcgagcttac gcaccccctc ggactcttcg gccgtgagct gccgcttgag ccaagcgaaa
     2041 cggcgcttgg cgaggatctt ccgctcgatc ggcgcggggt ccaagctcag cacggcgccg
     2101 atgcggttgg cagcgtcgcg cgcgacgagc gggatcttct gcggcacgac gccgcgcaag
     2161 agctcgacgg cgtcgaggct cgcgctcggc acctcgacgc tcaccgcgag cgcgtcgccg
     2221 ttgcggtcgt aaatggcgcc gcgcttcggc gcgacgtgca gccgccgctg ccgctgcgtc
     2281 tcggcgatct cgcgccagcc gctgccgtcc tcgatcatga tcgagtaggc cgactgcacg
     2341 acgagcccga ggccgagcgc gagcacgccc gagagcaggc ccattctcac ccgcacccag
     2401 cgcgcacgcg cggcctcgtc gatcatggcg cttgctcctc cgtgggcgcc gcggccgatg
     2461 cagccgtcac ggcgggcgcg tcgggttcgg caggcaacgg tcccgccggc aagatgcgat
     2521 cgggcggcgg ctcgctcatg ccgagcagcg tgcgcgcgac gaactcgacg cgctcgggcg
     2581 tcttgtgact cgacagctcg agctcgagca cgcgcttgac ctcgcgcagg cgcgcgatgt
     2641 gcgcgtgcgt gcgcccgagc tcgtaaccga gctcgaccgc gcgcacgcga agcgacaggt
     2701 gcagcacgaa cgccgccgtc gcagcgctca cggcgagcgt ccagagcacg aggaaggtgc
     2761 gctcgtttct cacgccggct cctccccggg tccgctcggc ggcacgcgcc gagccgtgcg
     2821 cagcttcgcg ctacgcgagc gcaaattgtg ctcgatttcg agctcgctcg gcacctgcgg
     2881 cttcttcgtg agcggctccc actcgctgcg gccgacgaac tcgcgcttga cggcgcgatc
     2941 ctcggccgag tgaaagctga tgaacgcagc gagaccgccc gagcgcacgc gaccccgcgc
     3001 gagggacagc aacgcgcgga gctcggtgtg ctcgccgttg accgcgatac gcagcgcctg
     3061 gaacgtgcgc gtcgccggat ccacgccgcc cacgcgccgg gggccgactg cgcggacgac
     3121 ggcgcgcctg aggtcgagcg tgtcggcgag ccgctcggcg gcgagcgcct gcttgatgca
     3181 gcgcgcgatg cggcgcgacg cgcgttcgtc gccgagctcg aagatgagat cggcgagctc
     3241 ctcttgcgag acgcgttcga tgagctcacg cgcggtctcg ccccgcgtcg ggtccatgcg
     3301 catgtcgatg gggcccgccg tgcggaagct catgccgcgc tcggggtcgg tgagctgctc
     3361 ggagctcacg cccagatcgg cgagcagcgc atcgatgcgc gtgatgccgg cggcgacgag
     3421 ggcctcgccg acctcgctga acgccgcgtg ctcgacgcgc gcgcgctcgc cgaacggcgc
     3481 gagcaccgcg gttgccgcag cgacggcgcg cgggtcgcga tcgaacgcga gcagccgcac
     3541 gcagggcagc gcgcgcaaaa gcgccgccga gtgcccggcg ccgcccgccg tgacgtcgac
     3601 catcacgccg tccgaaagct cgctgaacgc cgccagcacc tccgcgagca tcacgggggt
     3661 gtgaatgaac gcgggctcac tgtcgatacg tgcggccgcc atcatagctt gacctgctcg
     3721 agcgccgaac gaagctccac cgcctcgtcc ggagtcatcg cgagcgcgcg ttcccatt
//
LOCUS       DATIML010000004         3344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5487191, whole genome shotgun sequence.
ACCESSION   DATIML010000004 DATIML010000000
VERSION     DATIML010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3344
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5487191"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="VLJ38_00050"
     CDS             <1..703
                     /locus_tag="VLJ38_00050"
                     /inference="COORDINATES: protein motif:HMM:NF013695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HSU37912.1"
                     /translation="IFMLGGVFAIFEGVHKLRSAEAGAPPSVLWPLVVLGVSLVLEGG
                     SFTVAMREFNRDRRGRPFFEALFSGKDPTIPVVLLEDTAAVIGLLTAFSALVLSFLTG
                     SSLPDTIGSIVIGVLLCSVGFALAYDTHGLLIGEGARPELRAQAKAIAEATPGVEAVT
                     QLLSLHLGPDSILVALKVRFRPEVTLPELEATIDVMEERIRSAIPAMKRIFIEPDSDY
                     VEALDPERRPITTSR"
     gene            complement(687..1655)
                     /locus_tag="VLJ38_00055"
     CDS             complement(687..1655)
                     /locus_tag="VLJ38_00055"
                     /inference="COORDINATES: protein motif:HMM:NF019561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdaR family protein"
                     /protein_id="HSU37913.1"
                     /translation="MTVAERVTAAGTFVREAFTENLGLKALSLAFALGLFLFLYGQRD
                     EQQRTVAVGLTSRPPSEDSARELMTQLPASIHITLRGPAHVIDRLVQSGIPPVTVDLR
                     NGERESIVFNERMFSLPPDTHVTAADPPSIELEWEDVIARQIPIQAAITGQPAEGYVV
                     RGEPEVEPKQITARGPASLVEVLQFARVAAFDVSGLSEGSHRRRLALDPAPTRVRYLG
                     PPAATVAVTIARRVTEASFAARPVEVVGPAIIGVSPRAVDVTVVGPPEVVQALRAEQV
                     VPRANLMKAPGFDLKDLRHGSAELPVTVELAGAQARVQPPSVTVKW"
     gene            complement(1652..2728)
                     /gene="cdaA"
                     /locus_tag="VLJ38_00060"
     CDS             complement(1652..2728)
                     /gene="cdaA"
                     /locus_tag="VLJ38_00060"
                     /EC_number="2.7.7.85"
                     /inference="COORDINATES: protein motif:HMM:TIGR00159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004016 - adenylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase CdaA"
                     /protein_id="HSU37914.1"
                     /translation="MPELLRAYVASRSPVHYLRDALDIFIVYYCVYRALLVLRGTRAM
                     QVGVGLGVLFALYLVAQALELVTVLTIMGALISSMILIIVVVFQNDIRRGLQRVGSRA
                     WFGTFARTQEGKVIDEVVEAATELARHRIGALITFEQDANLDEFVGVHKGQLIDAQVS
                     SELLVSLFVPEGVNKLHDGSVVIRNLRIAKAGVFFPMPEGRVMDQSFGSRHRAALGIT
                     EETDAVVVIVSEERGTISFCFNGNIATNLDGPKLHAMLEAMFSPKVRKARKTKPGREA
                     AEAPLSVRREGDKPALAEEPRRITLVNEDPGSRRLRTPSEPPPPLRVAQSTPPPPVTP
                     SEPSDPSAADDLDDIDSDLPRGNG"
     gene            complement(2721..>3344)
                     /gene="folP"
                     /locus_tag="VLJ38_00065"
     CDS             complement(2721..>3344)
                     /gene="folP"
                     /locus_tag="VLJ38_00065"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HSU37915.1"
                     /translation="TALRYAVARGALVSIDTTSAEVAARALELGAHIVNDVSCLAEPE
                     LARVTAQAGATLVLMHARGPMSAQRGFSVYPDSGYGDIVHDVLAEWRGARDRAVSAGL
                     PNADIWLDPGLGFAKNARQSFELLARLGELTHEGVPLVVGASRKSFIASVDGAPPAER
                     LGGTIAACLAAVARGARVLRVHDVLAVRQALAVARLAEPSRAEARHA"
BASE COUNT          502 a         1170 c         1150 g          522 t
ORIGIN      
        1 catcttcatg ctcggcggcg tgttcgccat tttcgagggc gtgcacaagc ttcggagcgc
       61 cgaagcggga gcgccgccct ccgtcttgtg gccgctcgtc gtgctcggcg tctcgctcgt
      121 gctcgagggc ggcagcttca cggtcgccat gcgcgagttc aatcgcgatc gccgcggccg
      181 gccgtttttc gaagcgctct tctccggcaa ggatccgacc attcccgtcg tcttgctcga
      241 agacacggcc gcggtgatcg gccttttgac ggcgttcagc gcgctcgtgc tctcgtttct
      301 caccggcagt tcgctgcccg acacgatagg atccatcgtc atcggcgtgc tgctctgcag
      361 cgtcggtttc gcgctcgctt acgacactca cggcctcttg atcggcgagg gggcgaggcc
      421 cgagctccgc gcgcaggcca aggccatcgc cgaagccacg ccgggcgtcg aggcggtgac
      481 ccagctcttg agcctgcacc tcggtcccga ttccatcctc gtcgcgctca aggtccgctt
      541 tcgccccgag gtcacgctgc ccgagctcga agcgaccatc gacgtgatgg aggagcgcat
      601 tcgcagcgcc attcccgcga tgaagcgcat cttcatcgaa ccggacagcg actacgtcga
      661 ggcgctcgat ccggagagac gccccatcac cacttcacgg tgacgctcgg cggctgcacg
      721 cgcgcttgcg cgcccgcaag ctccaccgtc acgggcagct cggccgagcc gtgccgcaga
      781 tccttcaggt cgaagcctgg cgctttcatc aggttcgcgc gcggcacgac ttgctcggcg
      841 cggagggcct gcacgacttc gggcggaccg acgaccgtca cgtcgacggc tcgcggcgac
      901 acgccgatga tcgccgggcc cacgacttcc acgggccgcg cggcgaagct cgcctccgtg
      961 acgcggcggg cgatcgtgac cgcgaccgtc gcagcgggcg gcccgaggta gcgcacgcgc
     1021 gtcggcgccg gatcgagcgc gagccgccgc cggtgcgagc cttcgctcaa gcccgacacg
     1081 tcgaacgcgg cgacgcgcgc gaactgcagc acttccacga ggctcgcggg gccgcgcgcc
     1141 gtgatctgct tcggctcgac ctccggctcg ccccggacga cgtagccttc ggccggctgc
     1201 cccgtgatcg cggcttgaat cgggatttgc cgtgcgatca cgtcttccca ctcgagctcg
     1261 atgctcggcg ggtcggccgc cgtcacgtgc gtgtcgggcg gcagcgagaa catgcgctcg
     1321 ttgaagacga tgctttcgcg ctcgccgttg cgcagatcca cggtgacggg cgggatgccc
     1381 gactgcacga gccgatcgat cacgtgcgcc gggccgcgca gcgtgatgtg aatcgacgcg
     1441 gggagctggg tcatgagctc gcgcgccgag tcctccgacg gcgggcgcga ggtgagcccc
     1501 acggcgaccg tacgctgctg ttcgtcgcgc tggccgtaga gaaacaaaaa gagcccgagc
     1561 gcgaacgcga gcgaaagcgc cttgagcccg aggttctccg tgaaggcttc ccgcacgaag
     1621 gtgccggccg ccgtcacgcg ttcggcgacc gtcaaccgtt cccccgcggc agatcgctgt
     1681 ctatgtcgtc cagatcgtcc gcggcggacg ggtccgaggg ctccgacggc gtcacgggtg
     1741 gcggcggcgt gctttgcgcg acgcgcaagg ggggcggcgg ttcactcggc gtgcgcaggc
     1801 gtcgcgagcc ggggtcctcg ttcacgaggg tgatgcggcg cggctcctcc gcgagcgcgg
     1861 gtttgtcgcc ttcacgccgc acgctgagcg gcgcctccgc ggcttcgcgc ccgggcttgg
     1921 tcttgcgcgc cttcctcacc ttggggctga acatcgcttc gagcatggcg tggagcttcg
     1981 gcccgtcgag gttcgtcgcg atgttgccgt tgaagcagaa gctgatggtg ccgcgctctt
     2041 cgctcacgat cacgacgacg gcgtcggtct cttccgtgat gccgagcgcc gcgcggtggc
     2101 gcgagccgaa gctctggtcc atcacgcgcc cctcgggcat cgggaagaac acgccggcct
     2161 tggcgatgcg caggttgcgg atcacgacgg agccgtcgtg cagcttgttg acgccttcgg
     2221 gcacgaacag cgagaccaag agctcgctcg acacctgcgc gtcgatgagc tgccctttgt
     2281 gcacgcccac gaactcgtcg aggttcgcgt cctgctcgaa agtgatgagc gcaccgatgc
     2341 ggtgacgagc gagctcggtc gcggcctcga cgacctcgtc gatcaccttg ccctcttgtg
     2401 tgcgcgcgaa cgtgccgaac caggcgcggc tgccgacgcg ctgcaggccg cgccggatgt
     2461 cgttctggaa cacgacgacg atgatgagga tcatgctcga gatgagcgcc cccatgatcg
     2521 tgagcaccgt gacgagctcg agtgcttgcg ccacgagata aagcgcgaag agcacgccga
     2581 gccccacgcc gacctgcatg gcgcgcgtgc cacgcaagac gagcagcgcg cggtacacgc
     2641 agtaatacac gatgaaaatg tcgagcgcgt cgcgcaggta gtgcacgggc gaacggctcg
     2701 cgacgtaggc gcgcaggagc tcaggcatga cgcgcctccg cccggctggg ctcggcgaga
     2761 cgggccacgg cgagcgcctg ccgcacggcg aggacgtcgt gcacgcgcag cacgcgcgcg
     2821 ccacgtgcta cggccgcaag gcaagccgcg atggtgccac cgaggcgctc ggcgggcggc
     2881 gcgccgtcga ccgacgcgat gaacgactta cggctcgccc ccacgacgag cggcacgcct
     2941 tcatgcgtga gctcgccgag gcgcgccaag agctcgaagg attgtcgcgc atttttggcg
     3001 aaaccaagcc ccggatccag ccaaatatcc gcgttcggca gcccggcgct cacggcgcgg
     3061 tcgcgcgcgc cccgccactc ggcgagcaca tcgtgcacta tgtcgccgta acccgagtct
     3121 ggatacaccg agaagccgcg ctgcgcgctc atgggcccgc gcgcgtgcat gagcacgagc
     3181 gtggcgccgg cctgagccgt gacgcgcgcg agctccggct cggcgagaca cgacacgtcg
     3241 ttgacgatgt gcgcgccgag ctcgagcgct cgcgccgcga cttcggcgct cgtcgtgtcg
     3301 atcgacacga gcgcaccgcg cgcgaccgca tagcggagcg ccgt
//
LOCUS       DATIML010000005         4445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1444583, whole genome shotgun sequence.
ACCESSION   DATIML010000005 DATIML010000000
VERSION     DATIML010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4445
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1444583"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1376
                     /locus_tag="VLJ38_00070"
     CDS             <1..1376
                     /locus_tag="VLJ38_00070"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU37916.1"
                     /translation="VLKRLNGELARSDEAVQRFLAEARVAARLHHANVVGTHQIDWDE
                     VGPFIVLDYVEGGSLSDLVDATHDSGEKLPVPVVLRMALDVLAALSAVHEAKDGDGRP
                     LDILHRDVSLENILIGVSDGVARLSDFGVAKSALGRTITDPGCFVGKVLYFAPEYLLR
                     EPVGTPLDLYALGVTLWLALTGDELWPGRSDGHLARAIVEEGVPSLDGHRDVAPAVRD
                     FVARACARDPRARFQSAREMAAVLQELERHGAMATHAEVAACVERLLGERLRERRAAI
                     ARLAPELAGTRPSTPLELRQTVRDPHPSMPASEQRLRAAPAAEGAAPPAAKQAAAPAP
                     KSGAEPRRVRTFIVPAVVLALIALATGVLLRSPEPPPGAPELVANELPATPTSRVAAA
                     RPPEAHPPEPVVIPAEPAPPPRTSRAPAHRRAPQATRLPPAPAPAAVPAPLDTAPSGI
                     ARKNPYR"
     gene            complement(1417..1956)
                     /locus_tag="VLJ38_00075"
     CDS             complement(1417..1956)
                     /locus_tag="VLJ38_00075"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSU37917.1"
                     /translation="MNWQARNARSFRKISGVRLRPELVEALPPSARTTLVSEVMEPMV
                     LTIDSRTDLFAALRLFGESGVHAAAVAGDGGEAVGVVSKTDVLGELCEHPSQHHWPEP
                     AGAPAGLEARAALQVHDIMTPLTVAVTASTSLSRAIAVMARSGVHPVPVVADDESIVL
                     GILSSADVLRWLAGNGIYG"
     gene            complement(2122..3345)
                     /locus_tag="VLJ38_00080"
     CDS             complement(2122..3345)
                     /locus_tag="VLJ38_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSU37918.1"
                     /translation="MPPAPIDYPERMTSSPAGSSLDELSAIDAELDEEERLVRESVRR
                     FVRERYLPRAAELYAREEFPRDLVPELAELGVLGASITGYGCAGMSPVAYGLMLEELE
                     YGDSGLRSFTSVQGSLAMFALYAFGSEEQKQHYLPAMARGQVIGCFGLTEPDSGSDPG
                     SLQTRARRDGADFVLSGTKMWITNAPIADLAVVWAKTDDGGAESIRGFVVERGTPGFE
                     TSRIHGKMSLRASETGALHFDGCRVPARAALEHKPGLGAALQCLAEARFGISWGAVGA
                     AKACFDCVLAYTKERVQFGVPIAKKQLVQAALADMASAIVRAELLSLHYGRSKQRVRK
                     LSPAQVSLCKRNNVEMALETARTARSLLGANGILLEYPVIRHLMNLESVYTYEGTHEI
                     HTLVLGKALTGEDAF"
     gene            complement(3317..>4445)
                     /locus_tag="VLJ38_00085"
     CDS             complement(3317..>4445)
                     /locus_tag="VLJ38_00085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37919.1"
                     /translation="LPLFDLGPGDKLRAYVRTDSVADFLEANLPPALGSIEGAPFAKV
                     RRVLVAADSDAELWLAERRAERRLVSAPELGDGPGAAAILRHLDAFRLRPRPLDAPEQ
                     GFAAALELARAARSELGDALASEVFFEAERRFYERKNRAARVQKARQDALGLGWFNRD
                     HHTYRSSRASFRSLVAVLETLGVRCRERFYAGRDAGWGAQVLEHPETLSMVFADVDLS
                     PEEITGDFPHEGLAARPSLGTVGLWCELHGEAFLAAGMHHLECQFDIDAITQQLREHG
                     VGVMGRFSDFPHLKQAFTEGEIWPVAEGRLDRAERARLLAPAQVERLRREGAIGSHFE
                     VLERNAGYRGFNQDGINRIILATDPRRSEATLHAAGADRLS"
BASE COUNT          719 a         1564 c         1498 g          664 t
ORIGIN      
        1 tcgtgctcaa gcggctgaac ggcgagctcg cacgcagcga cgaggcggtg cagcgcttcc
       61 tcgccgaagc gcgcgtcgcg gcgcgcttgc accacgccaa tgtcgtcggt acgcaccaaa
      121 tcgactggga cgaggtgggg ccgttcatcg tgctcgatta cgtcgaaggc ggctcgctct
      181 ccgatttggt cgacgccacg catgacagcg gcgaaaagct gccggtgccg gtcgtgctcc
      241 gcatggcgct cgacgtgctc gccgcgctca gcgccgtgca cgaagcaaag gacggcgacg
      301 gacgtccgct cgacatcttg caccgcgacg tttcgctcga gaacattctg atcggtgtga
      361 gcgacggcgt cgcgcgcttg tccgacttcg gcgtcgcgaa gagcgcgctc gggcgcacga
      421 tcacggatcc aggctgcttc gtgggtaagg tgctctactt tgcgcccgag tacttgctgc
      481 gtgaaccggt gggaacgccg ctcgacctat acgcgctcgg cgtcaccctc tggctcgcac
      541 tgacaggcga cgagctctgg cccggccgct cggacgggca cctcgcgcgc gccatcgtcg
      601 aagagggcgt gccgtccctc gacggccacc gcgatgtcgc ccccgccgtg cgggacttcg
      661 ttgcccgggc gtgcgctcgc gacccgcgcg ctcgcttcca atcggcgcgc gagatggccg
      721 ccgtgctcca agagctcgag cggcacggcg cgatggcgac gcatgccgaa gtcgccgcct
      781 gcgtcgagcg tctgctcggc gagcgactgc gggaacgccg cgccgccatc gcacgtctcg
      841 cgcccgagct cgccggcacg cgtccgagca cgccgctcga gctccgtcag accgtacgcg
      901 acccgcatcc gagcatgccg gcaagcgagc aacgactgcg ggccgcgcca gcggcggagg
      961 gcgcggcgcc gccagcagcg aagcaagccg ccgcgccagc gccaaagagc ggcgccgaac
     1021 cacgacgcgt ccgcacgttc atcgtccccg ccgtggtgct cgcgctgatt gcacttgcga
     1081 ccggcgtctt gttgcgctcg ccggagccac cgccgggggc gccagagctc gtcgcgaacg
     1141 agctacccgc cacgccgaca agccgcgtag cggcagcgcg cccgccggag gctcacccac
     1201 ccgaaccagt cgtgatcccc gccgagccag cgcccccgcc ccgcacgtcc cgggctccgg
     1261 cgcatcgtcg ggcgccccaa gccacgcggc tgccgcccgc accggcccct gcagccgtcc
     1321 cagcgccgct cgacactgcg ccgagcggga tcgcccgaaa aaacccgtat cgctgagggt
     1381 ccgcgcggct tgggagcgca gggaagcgcc gtcgagctag ccgtaaatcc cgttgccggc
     1441 gagccagcga agcacgtccg ccgaggacaa tattcccaag acaatgctct cgtcgtcggc
     1501 cacgacgggc acggggtgca cgccgctacg cgccatgacg gcgatggccc gggaaagcga
     1561 ggtcgacgcc gttaccgcta cggtgagggg cgtcatgatg tcgtggactt ggagggcagc
     1621 ccgcgcctcg agcccggccg gtgcacctgc tggctctggc caatggtgct gcgaggggtg
     1681 ttcacagagc tcgccgagaa catcggtctt ggaaacgacg cccacggctt cgcctccgtc
     1741 gcccgccacc gctgccgcgt gaaccccact ttcgccaaaa agccgcagtg cggcaaacaa
     1801 atccgtccgc gaatcgatag tgagcaccat cggttccatg acctcgctca ccagagtcgt
     1861 acgcgccgag ggtggcaggg cctccaccaa ctccggacgg agtcgaactc cggagatctt
     1921 acggaagctc ctcgcatttc gggcctgcca attcatcttc ccggacgcgt agcattctcc
     1981 gtgccaacgc cgaactctgc cttgtcagct gtgagtgaaa gaggagtggg gcaatgcacg
     2041 gcgctgctgc aacgcacccg ggttgcgcgc gttcgggccg gctgccgagt gcggcgaatt
     2101 cgtacaaaac tcgacggtcg ctcagaaggc gtcttcacca gtgagcgcct tgccgagcac
     2161 gagcgtgtgg atctcgtgcg tgccctcgta cgtgtagacg ctttcgaggt tcatgagatg
     2221 ccggatgacc ggatactcga ggagaatgcc gttcgcaccg aggaggctcc gcgcggtccg
     2281 cgccgtttcg agcgccattt cgacgttgtt acgcttgcag agggacacct gcgcggggga
     2341 tagcttccga acgcgctgct tgctgcgccc gtaatggagg ctcaagagct cggcgcgtac
     2401 gatcgcgctc gccatgtcgg cgagcgcggc ttgaacgagc tgctttttgg cgatgggcac
     2461 gccgaattga acgcgttcct tcgtgtacgc gaggacgcaa tcgaaacagg ccttggcggc
     2521 gccgaccgcg ccccaggaga taccgaagcg cgcttcggcg aggcactgca gggcggcgcc
     2581 cagccccggc ttgtgctcga gcgcggcgcg cgccggcacg cgacagccgt cgaagtggag
     2641 cgcaccggtc tcgctcgctc tgaggctcat cttcccgtga atgcgcgacg tctcgaaccc
     2701 gggggtgccg cgctcgacca cgaaaccccg gatcgactcg gcgccgccgt catccgtttt
     2761 cgcccacaca accgcgagat cggcgatggg agcattggtg atccacatct tggtcccgct
     2821 gagcacgaaa tcggcgccgt cgcggcgcgc acgcgtctgc agcgagcccg gatcggagcc
     2881 gctgtccggc tcggtgagcc cgaagcagcc gatgacttgt ccgcgcgcca tggcgggcag
     2941 gtagtgctgc ttctgctcct cgctgccgaa ggcgtagagc gcgaacatgg cgagcgaacc
     3001 ctggacgctc gtgaagctcc gaaggccgct gtcgccgtac tcgagctctt cgagcatcaa
     3061 gccgtacgcg accgggctca tgccggcgca accgtaaccc gtgatgctcg cgccgagcac
     3121 gccgagctcg gcgagctcgg gcacgaggtc gcgcggaaac tcctcacgcg cgtagagctc
     3181 ggctgcgcgc ggcaggtaac gctcgcgcac gaaccttcgt acgctctcgc gcacgagccg
     3241 ctcttcctcg tcgagctcgg cgtcgatcgc cgaaagctcg tccagggacg aacccgctgg
     3301 gctcgaggtc atgcgctcag gatagtcgat cggcgccggc ggcatggagc gtcgcctcgg
     3361 aacggcgcgg atcggtcgcc agaatgatgc ggttgatgcc gtcttgattg aagccgcggt
     3421 aacccgcgtt ccgctcgagc acctcgaagt gcgagccgat ggcaccctcg cgccgcaggc
     3481 gttccacctg agccggcgcg agtagccgtg cccgttcggc gcggtcgagg cggccttcgg
     3541 ccaccggcca aatctcgccc tcggtgaacg cctgcttcag gtggggaaag tcgctgaaac
     3601 ggcccatcac gccgacgccg tgctcgcgca gttgctgcgt gatcgcgtcg atgtcgaact
     3661 ggcactcgag atggtgcatg ccggccgcga ggaacgcctc gccgtgcagc tcgcaccaaa
     3721 ggccgaccgt gccgaggctc ggccgcgccg cgagcccttc gtgcgggaag tcccccgtga
     3781 tctcttcggg gctcagatcg acgtcggcga agaccatcga taacgtctcc ggatgctcga
     3841 gcacctgcgc gccccaaccg gcgtcccgtc ccgcataaaa acgctcgcga caacgcaccc
     3901 cgagcgtctc gagtaccgcg accagcgaac gaaacgaagc gcggctcgag cggtacgtgt
     3961 ggtgatcgcg gttgaaccag ccgagcccga gcgcgtcctg acgcgccttc tgaacccgcg
     4021 ccgcccgatt cttgcgctcg taaaagcgtc gttccgcctc gaagaacacc tcgctcgcga
     4081 gcgcgtcgcc gagctcgctg cgggcggcgc gcgccagctc gagtgcggcc gcgaagcctt
     4141 gctcgggcgc gtcgagcggg cgcgggcgca gccgaaaagc gtcgaggtgc cgtagaatcg
     4201 ctgccgcgcc cgggccgtcg ccgagctcgg gggcgctcac gagccggcgc tcggcacggc
     4261 gttcggcgag ccagagctcg gcgtcggaat cggctgcgac gagcacgcgc cggaccttcg
     4321 caaagggagc tccctcgatg gagccgagcg ccggcggcag attcgcttcg aggaaatcgg
     4381 cgacgctatc cgtgcggacg taggcacgga gcttgtcgcc ggggccgaga tcgaagagcg
     4441 gcagg
//
LOCUS       DATIML010000006         1879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2888360, whole genome shotgun sequence.
ACCESSION   DATIML010000006 DATIML010000000
VERSION     DATIML010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2888360"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VLJ38_00090"
     CDS             <1..261
                     /locus_tag="VLJ38_00090"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSU37920.1"
                     /translation="KFEAGRSRFGPYDVAGNVWEWVADWYAPYTADAQTSPKGPDTGD
                     KKVIRGGAWNGSFASWLRPSFRYAQDPAALSYGIGFRCAADL"
     gene            453..>1879
                     /locus_tag="VLJ38_00095"
     CDS             453..>1879
                     /locus_tag="VLJ38_00095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37921.1"
                     /translation="MAGGPLDDPRLREVEACLNAGRFDEAQQKLVGLGGVRALGPGVA
                     YLTTRLLAQRGRLDAVAVAERIQDVLAEAPDFPEAHSYLVSVRPSAPARDIAHAVTLP
                     GNLDPHGARLPTVRAPAPLPRSIGGARPPLSISTRMVSGPPSARRVPLETPRVPPLVV
                     HAPARAKTADLGTLEPPRSELPTEPAPPPSEPSSTELPRFEPEPPSITARGIWDPVEL
                     DLASGRVEAALSALEKQAGLRLDQLVARRMPEFEAVAEQAADFLASSPIVCHFPAYDL
                     SLGSLARLDAALALFARRPQRAPRYALSVLLSAYVGECVRRASGGKWLGRLAEPDMAT
                     VERPRDDSFQPWRAVHLALTEGRAVRVSAGGTKPGVQSSQARRPIEPPSAWAPDPWPP
                     FPLFQRIGRVVPGSVLGTWAARIAQVPLDRSIPSLGAVDQYLALLATSDAVAEASGGW
                     ARRAAVLTGAYVGEVLCLNAGARWS"
BASE COUNT          246 a          706 c          645 g          282 t
ORIGIN      
        1 aagttcgagg ccggccgctc gcgcttcggc ccgtacgacg tggcgggcaa cgtctgggag
       61 tgggtggccg attggtacgc gccttacacg gcggacgcgc aaacgagccc caaaggccca
      121 gacactggcg acaagaaggt catccgcggc ggcgcttgga acggcagctt cgcgagctgg
      181 ctcaggccgt cgtttcgtta cgcacaggat ccggcggcgt tgagctacgg gatcggcttt
      241 cgctgcgcgg ccgatctctg acggccactc gcgagggctg ctcggtgcgc gcctccgctc
      301 ccgccgcacc gctgcctaca ccggtgccgc tcgacccacc ttacccgtga ccccgatctc
      361 ggagcacaat acgctcgagg tacaaacatg cgccagggtc gctccgtatc gacaccccga
      421 ccgacgctga gcggtggcgc tagattgcgt gcatggctgg cgggccgcta gacgatcctc
      481 gcctgcgcga ggtggaagcc tgcctcaacg cggggcgctt cgacgaggcc cagcaaaagc
      541 tcgtggggct cggcggcgtg cgcgcgctcg gacccggcgt cgcttacctc acgacgcgcc
      601 tcctcgcaca acgcggccgc ctcgacgctg tcgccgtcgc cgagcgcatc caggacgtgc
      661 tcgccgaagc gcccgatttc cccgaagcgc acagctacct cgtgtccgtt cgaccctcgg
      721 cgcccgcgcg cgacatcgcg cacgcggtga cgctcccggg caatctcgat ccgcacgggg
      781 cgcgactgcc gaccgtgcgg gcaccggctc cgctgccgcg ctcgattggc ggcgcgcgcc
      841 cgccactttc gatctcgacg cgcatggtgt caggtcctcc gtccgcacgc cgcgtgccgc
      901 tcgaaacgcc gcgcgtgccg ccgctcgtcg tccacgcgcc ggcccgggcg aagaccgccg
      961 atctcggtac gctcgagccg ccgcgctcgg agttgccgac ggagccggcg cccccgccga
     1021 gcgagccctc gtcgactgag ctgccccgct tcgaacccga accgccgagc atcacggcgc
     1081 gagggatctg ggatccggtc gagctcgatc tcgcgtcggg ccgcgtcgaa gccgcgctgt
     1141 cggcgctcga gaagcaggcc ggcttgcggc tcgatcaact cgtcgcgcgg cgcatgcccg
     1201 aattcgaagc cgtcgcggag caggccgcgg atttcctcgc gagctcgccg atcgtctgcc
     1261 atttccctgc gtacgatctc tcgctcggta gcctcgcgag actcgacgcg gcgctcgcgc
     1321 tcttcgccag gcgcccgcag cgcgcgccgc gctatgcgct ctcggtcctg ctcagcgcct
     1381 atgtcggcga gtgcgtgcgc cgcgcctcgg gtggcaagtg gctcggccgg ctcgccgagc
     1441 ccgacatggc gacggtcgaa aggccgcgtg acgacagctt tcagccttgg cgcgccgtgc
     1501 atctcgcgct cacggagggc cgcgccgtac gcgtgagcgc cggcgggacc aagcccggcg
     1561 tgcagagctc gcaagcgcga cgaccgatcg agcctccgtc ggcgtgggcc cccgacccgt
     1621 ggccgccgtt cccgctgttt caacgcatcg gccgcgtcgt gcccggctcc gtgctcggta
     1681 cgtgggcggc gcgcatcgca caagtcccgc tcgatcgctc gatcccgagt ttgggcgccg
     1741 tggatcagta cctcgcgctg ctcgcgacga gcgatgccgt cgccgaagcg agcggcggct
     1801 gggcgcgccg tgcggccgtg ctcaccggcg cgtacgtggg cgaggtcttg tgcctcaacg
     1861 cgggcgcgcg ctggagcga
//
LOCUS       DATIML010000007         1544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4332116, whole genome shotgun sequence.
ACCESSION   DATIML010000007 DATIML010000000
VERSION     DATIML010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4332116"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..>1544)
                     /locus_tag="VLJ38_00100"
     CDS             complement(33..>1544)
                     /locus_tag="VLJ38_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37922.1"
                     /translation="GFDTTSVRALGLLGTNELRTGDIEQGRAMLERAFAIDPFNVWHK
                     NTLDLLDSLKTFKTTETSHFRIVAPPEESALLTTYLVPLLDEAYDSLSKRYGYTPRGP
                     VRVELYRRHADFSVRTMGIPGLGALGVSFGNLLALDAPSSRPRGEFNWGSTAWHELTH
                     AFTLGLSGNRTPRWLSEGLSVLEERRARAGWGAGPTAEFIAAYGGGRLRPVSLLNDGF
                     VRPRFGGEVILSYYEASLVCEMIEKEFGPKALTSMLVAYRDGLTTPQVFERVLKLTPS
                     QMDAKFDGYVRARFASPLRSIVAGDSGKAVRGDFVMAMRSGADFLRKKQADSARAALE
                     RAEALFPDYAGPSSPAEYLAGLANDRGDYKEALAQVTRITTRNETAWDANLLEVQLRE
                     KLGDSAGVRAPLERLIWISPYDVDLHVKLAELASRAGDHKTALRERRAIVALNPPDPI
                     EARYQLAKELAAAGDAAAARKELLAVLEQAPSFEKGQTLLLELRARGAGSNSP"
BASE COUNT          223 a          574 c          508 g          239 t
ORIGIN      
        1 cgctccggcg atgaccgtct tcacgcgtcg cttcatggcg agttgctccc cgcgccgcgc
       61 gcccgcagct cgagcagcag cgtctgcccc ttctcgaatg acggcgcctg ctccagcacg
      121 gcgagcagct ccttccgcgc cgccgccgcg tcgcccgccg cggcgagctc cttcgcgagc
      181 tgataccgcg cctcgatcgg atcgggcggg ttcagcgcga cgatcgcgcg gcgctcccga
      241 agcgcggtct tgtgatcgcc cgcgcgcgac gcgagctcgg ccagcttcac gtggagatcg
      301 acgtcgtacg gcgagatcca gatcagccgt tcgaggggcg cacggacgcc ggcggagtcg
      361 ccgagcttct cgcgcagttg cacctcgagc aggttggcgt cccacgccgt ctcgttgcgc
      421 gtcgtgatcc gcgtgacctg cgccagcgct tccttgtagt cgccgcgatc gttcgccagg
      481 ccggcgaggt actccgccgg tgagctcggc cccgcatagt cgggaaagag cgcttcggcc
      541 cgctccaatg ccgcgcgcgc cgagtcggcc tgcttcttcc gcaggaagtc ggcgccgctc
      601 cgcatcgcca tgacgaagtc gccgcgcacc gccttcccgc tgtctcccgc cacgatcgac
      661 cggagcggcg acgcgaaccg cgcgcgcacg tacccgtcga acttcgcgtc catctgcgac
      721 ggcgtgagct tcagcacgcg ctcgaacacc tgcggcgtcg tcagcccgtc tcgataggcg
      781 acgagcatcg aggttagcgc cttggggccg aactccttct cgatcatctc gcagacgagc
      841 gacgcctcgt agtagctgag gatcacctcg ccgccgaacc gcgggcgcac gaagccgtcg
      901 ttgagcaggc tcaccggccg cagccggccg ccgccgtacg ccgcgatgaa ttccgccgtc
      961 ggtccggcgc cccagccggc gcgcgcccgc cgctcctcga gcacgctcaa cccctcggag
     1021 agccaacgtg gtgtacggtt cccgctgagg ccaagggtga acgcgtgcgt cagctcgtgc
     1081 cacgccgtcg agccccagtt gaactcacca cgcggccgcg acgacggcgc gtcgagcgcg
     1141 agcaggttgc cgaagctcac gccgagtgcg ccgagccccg ggatgcccat cgtccgcacc
     1201 gagaagtcgg cgtgccgccg atagagctcc acgcgcacgg gcccgcgcgg cgtgtagccg
     1261 tatcgcttcg acagcgagtc gtacgcctcg tcgagcagcg gcacgaggta cgtcgtgagc
     1321 agcgccgact cctcgggggg cgccacgatc cggaagtggc tcgtctccgt cgtcttgaac
     1381 gtcttgagcg aatcgagcag gtcgagcgta ttcttgtgcc atacattgaa cgggtcgatc
     1441 gcgaaggcgc gctcgagcat cgcgcgaccc tgctcgatgt caccggtgcg tagctcgttc
     1501 gtgccgagca ggccgagcgc gcgcaccgac gtcgtgtcga accc
//
LOCUS       DATIML010000008         1823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_289839, whole genome shotgun sequence.
ACCESSION   DATIML010000008 DATIML010000000
VERSION     DATIML010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289839"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1742)
                     /locus_tag="VLJ38_00105"
     CDS             complement(<1..1742)
                     /locus_tag="VLJ38_00105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37923.1"
                     /translation="MGAISRKLEPVRRHWTRLRPLFAPIARFEPTLYVLVCALGTLHV
                     AGRFYGSLRLQTLYADYWNDPSLWSPHRTREFGPWSAPLDDVFIHFDFARSTAHGHPF
                     EWVAGNGYSSGSTSLLYPFVLALGYVLGFQGLALMHFAAVVACVSVFALLLALRRAFD
                     ALPAWTSYLLPLALLGVGALSWAFFSGMEIAFFMALFGGAFVTWLGLVTPPEPSPESM
                     LGRSVALGLWGAALTATRPEAAITVALFAVSAAWSLRRRGLRRMVAALVLVGTPGALV
                     VIASAVANWIFTGEAAAAGAIAKLELYHPYLSGEEKLGLWLFYLGYQVLRLTQEHLES
                     IPAVGWLVWVAALAALAFKETRRPAAFLWCCLVGWAMTVALNGQVRWQNERYSMPALA
                     WLLTNAALGAGAAIVHGSRFPRHQGRVLMLGGTVLSLAALVWQAEPNFRFQAWYFGRG
                     ARNIYDQHVTLGRALRQAFPSEPTVLVGDAGAIPYLSEGPAIDLIGLGGYKGLPFARA
                     TRAHVGSAIELIEHLSPAERPKLLAIYPSWWDELPLWFGTRLFEVPARGNVVCGAPSA
                     VVYRANWEPLAGSSR"
BASE COUNT          360 a          586 c          653 g          224 t
ORIGIN      
        1 cggctgctgc ccgcgagcgg ttcccagtta gctcgataaa cgacggcgct cggcgcgccg
       61 cacacgacgt tgccccgggc gggcacctcg aacaagcgcg tgccgaacca gagcggtagc
      121 tcgtcccacc acgaaggata aatcgcgagc agctttggac gctcggcggg cgagaggtgt
      181 tcgatgagct cgatcgcgga gccgacgtgg gcacgcgtcg cgcgcgcgaa cggcaggcct
      241 ttgtagccgc ccaagccgat cagatcgata gcgggtcctt cgctcaggta aggaatggcg
      301 cccgcgtcac cgacgagcac cgtgggctcc gacggaaacg cctgccgcag cgcgcgaccg
      361 agcgtcacgt gctggtcgta aatgttgcgg gcgccgcgcc cgaaatacca agcttgaaaa
      421 cggaagttcg gttcggcttg ccagacgagg gcggcgagcg agagcaccgt gccgcccagc
      481 atcagcactc gaccttggtg gcgggggaag cgggagccgt gaacgatggc ggcgccggct
      541 ccgagcgccg cgttggtcag cagccaggcg agagccggca tcgagtagcg ctcgttctgc
      601 cagcgcacct gcccgttcag cgcgaccgtc atcgcccagc ccacgaggca acaccaaagg
      661 aaagccgcgg ggcgccgcgt ctccttgaaa gcgagcgccg cgagggccgc gacccagacg
      721 agccagccga cggcggggat gctctcgagg tgttcctgcg tcaggcggag cacctggtag
      781 ccgaggtaga acaaccagag accgagcttt tcttcacccg agaggtaggg gtgataaagc
      841 tcgagtttcg cgatggcgcc cgccgcagcg gcttcgcccg tgaagatcca attggcgacc
      901 gcgctcgcga tcacgacgag cgcgcccggc gtgccgacga gcacgagcgc cgcgaccatt
      961 cggcgaagcc cgcgccggcg aagggaccag gcggcgctga ccgcgaagag tgcgaccgtg
     1021 atggcggcct cggggcgcgt cgccgtgagc gcggcacccc agagcccgag cgcgaccgac
     1081 cggccgagca tgctctcggg cgacggttcg ggcggcgtga cgagcccgag ccaggtgacg
     1141 aaggcgccgc cgaacagcgc catgaaaaag gcgatttcca tgccgctgaa aaacgcccag
     1201 ctgagcgctc ccacgccgag cagcgcgagc ggcaacagat acgaggtcca ggcgggcaag
     1261 gcgtcgaacg cccgtcgcag cgcgaggagg agcgcaaaga ccgacacgca cgcgacgacg
     1321 gccgcaaaat gcatgagcgc gaggccctga aaaccgagca cgtagccgag ggcgagcacg
     1381 aagggataga gcaggctcgt gctgccgctc gagtagccgt tgccggcgac ccactcgaag
     1441 ggatggccgt gagcggtcga gcgagcgaag tcgaaatgaa tgaaaacatc gtcgagcggc
     1501 gcggaccacg ggccaaactc gcgggttcgg tgggggctcc agagcgacgg gtcgttccag
     1561 tagtcggcat agagcgtctg taggcgaagg gagccgtaga aacgcccggc gacgtggagc
     1621 gtgccgagtg cgcagacgag cacgtacaac gtcggctcga agcgcgcgat gggcgcgaac
     1681 agcggccgaa ggcgagtcca gtgccgccgc acaggctcga gtttccgtga gattgcgccc
     1741 atccgaagac tccccggtct atcacgcgct ccggccgcgt tgcgtggcgc ttggtctttc
     1801 actgggtcga gtcgtccgaa aac
//
LOCUS       DATIML010000009         1977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4332470, whole genome shotgun sequence.
ACCESSION   DATIML010000009 DATIML010000000
VERSION     DATIML010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4332470"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..971)
                     /locus_tag="VLJ38_00110"
     CDS             complement(<1..971)
                     /locus_tag="VLJ38_00110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37924.1"
                     /translation="MASCALFCAAILATPNGKAAERRLEPGARAWADRAEGAIRGITI
                     GPIESGLHPGKGYGGDAYWRTLAETRALGANWVSLTPFGRVADLSPTGVSLTFEQPFE
                     QNRVAVGRAIDLARAAGLRVLLVPHLWVESGGWRGELDPGSEEDWQRFAKSYGAFLRE
                     WALVARDHHADMLALGVELRSWVTTAHAPSFVALAREIRALYPGLLTYASNWDDVDDS
                     VITGELDLIGVNAFFPLADHPGATTSELMQGGERVAQKLAAVAEHWGKPIVLTEFGYT
                     TRVDPALRPWEWPDTMSHVVVDEDAQASAYAGLLAPLMQEPWLAGAFV"
     gene            1064..1285
                     /gene="infA"
                     /locus_tag="VLJ38_00115"
     CDS             1064..1285
                     /gene="infA"
                     /locus_tag="VLJ38_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HSU37925.1"
                     /translation="MSKGDLLEMEGVIQDALGGGQYNIKVDQGGAIVRAQLSGRMRRH
                     HIRVLPGDRVRVAVSPYDLSHGLIVYRGK"
     gene            1282..>1977
                     /locus_tag="VLJ38_00120"
     CDS             1282..>1977
                     /locus_tag="VLJ38_00120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37926.1"
                     /translation="MSARARALVFVFTLALAGACKREPAREHAPTPSASAAGPGVLAP
                     SAEQPPAVLYLPDGGDHALEGEPPPTLSGPSTLGRCGADMVDVGGRFCIDRYEASLVD
                     VRLARAISPYFAPRRHDVRSAFDAFLGAPRPGAPELPHPPVWELDETFEPKAVSVPGV
                     PPNGYVSGLLAKVACVNAGKRLCTAAEWVTACRGERNRQFPYGASYEAGACNVYREAH
                     PAAMIWGNASRNHL"
BASE COUNT          303 a          681 c          683 g          310 t
ORIGIN      
        1 acgaacgctc ccgcgagcca gggctcttgc atgagcggag cgaggaggcc cgcgtaggcg
       61 ctcgcctgcg cgtcttcgtc aacgacgacg tggctcatcg tgtcgggcca ctcccaggga
      121 cgcagcgcgg ggtcgacacg cgtcgtgtag ccgaattccg tgagcacgat gggtttgccc
      181 cagtgctccg cgacggccgc gagcttttgc gccacgcgct cgcccccttg catcagctcg
      241 ctcgtggtcg cgcccgggtg atcggcgagg ggaaagaaag cgttcacgcc gatgagatcg
      301 agctcccccg tgatgacgct gtcgtctacg tcgtcccagt tcgacgcgta cgtgagcagg
      361 ccggggtaga gcgcgcggat ttcgcgagcg agcgcgacga agctcggcgc gtgcgccgtc
      421 gtcacccagc tgcgaagctc gacgccgagg gcgagcatgt cggcgtgatg gtcgcgcgcg
      481 acgagcgccc actcgcgcaa gaaggcgccg tagctcttgg caaagcgctg ccagtcctcc
      541 tcgctgcccg gatcgagctc gccgcgccag ccgccgctct cgacccaaag gtgtggcacg
      601 agcaggacgc ggagcccggc tgcgcgcgcg aggtcgatgg cgcgacccac cgcgacacga
      661 ttctgctcga acggttgctc gaacgtgagg gacacacccg tgggtgaaag atcggcgacc
      721 cggccgaacg gcgtgaggct cacccaattg gcgccgagcg cccgcgtttc cgcgagcgtc
      781 cgccaatacg cgtcgccgcc gtaccctttg ccggggtgca acccgctttc gatcgggccg
      841 atcgtgatgc cgcggatggc gccttcggca cggtcggccc acgcccgagc gcccggctcg
      901 aggcgccgtt cagccgcttt gccgttcggc gtggcgagaa tggcggcgca gaacagcgcg
      961 caggaggcca ttcgagcgac gctcgcttgc tcgaagcgcg gggatatgta ttcttccgcc
     1021 ggcaaaacct gcgactagga atttttccca cgagtcttaa gacatgagca agggcgatct
     1081 gctcgaaatg gagggcgtca ttcaagacgc ccttggcggc ggccaataca acatcaaggt
     1141 cgaccagggc ggcgccatcg tgcgagcaca gctctctggt cgtatgcggc gacaccacat
     1201 ccgcgtgctg ccgggggatc gcgtgcgcgt cgcggtttcc ccgtatgact tgagccacgg
     1261 gctcatcgtt tatcgcggca agtgagcgcg cgcgctcgcg cgctggtctt cgttttcacg
     1321 ctcgcgctcg cgggggcttg caaacgcgag ccggcgcgcg agcatgcacc tacgccgagc
     1381 gcgagcgcag cggggcccgg cgtacttgcg ccgagcgccg agcagccgcc ggccgtgctt
     1441 tatttgcccg acggcggcga tcacgcgctc gaaggcgagc cgccgcccac gctgagcgga
     1501 ccctcgacgc tcggacgctg cggcgccgac atggtggacg tcgggggccg cttctgcatc
     1561 gatcgttacg aagcgtcgct cgtcgacgtg cggctcgcgc gcgcgatctc gccgtacttc
     1621 gcgccgcggc gtcacgacgt gcgctcggcg ttcgatgcgt tcctcggcgc gccgcgcccg
     1681 ggtgctcccg agctcccgca tccgccggtt tgggagctcg acgagacgtt cgaacccaaa
     1741 gccgtctccg tgcccggcgt gcccccgaac ggctacgtga gcggcctgct cgcgaaagtc
     1801 gcctgcgtga acgccggcaa gcggctctgt acggccgccg aatgggtcac ggcgtgccgc
     1861 ggcgagcgaa accgccagtt tccgtacggc gcgagctacg aagcgggcgc ctgcaacgtg
     1921 taccgggaag cgcaccctgc ggccatgatc tggggcaacg cctcgcgaaa tcacttg
//
LOCUS       DATIML010000010         2572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1445112, whole genome shotgun sequence.
ACCESSION   DATIML010000010 DATIML010000000
VERSION     DATIML010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445112"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..386
                     /locus_tag="VLJ38_00125"
     CDS             <1..386
                     /locus_tag="VLJ38_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase"
                     /protein_id="HSU37927.1"
                     /translation="VLNVAGHRIGTAEIESALVSHRAVAEAAAVGRPDELKGQALVAF
                     VTLKPGHEPGDAMKKALAEHVAQEIGKFARPDDIRFAEGLPKTRSGKIMRRLLKDVAA
                     GREAQGDISTLEDLNVLAKLRGQDE"
     gene            462..1187
                     /locus_tag="VLJ38_00130"
     CDS             462..1187
                     /locus_tag="VLJ38_00130"
                     /inference="COORDINATES: protein motif:HMM:NF033768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AgmX/PglI C-terminal domain-containing protein"
                     /protein_id="HSU37928.1"
                     /translation="MLSSSPARLVSSALFLTFVTACGGNEPPPKDASVADRAPKQESG
                     GPTISATSEIGGMNEDDVDAAFKASLKSFERCLNLGAKRVEFLGGSVAFLLKIDGTGH
                     VTSAYFEHSTLGSRPTEQCMLDAVRAKSWPKPVGGEHGLARKSFDFDAPNDVRPPTTW
                     DEHEAAPGLKKIASEIAECKRGRSGPFEATLYVGTDGKVLSASVTPPDEDGDGVIDCL
                     VGVLEAATFPSPGSWPAKVTLAI"
     gene            complement(1247..2188)
                     /locus_tag="VLJ38_00135"
     CDS             complement(1247..2188)
                     /locus_tag="VLJ38_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37929.1"
                     /translation="MKNTRLSSFSLTSRLALRAASVLMVAGSATGCVPAKNYEEVRSV
                     AESEAKAHEHTRQRLEASMDRIHALEQELTAREQSLNVDENAAAESKLATAVATKEKE
                     AAVQLVEELRSELARTGDHLMIFAREKQDLAQTLLVAERRMADIELAGKKLDELVATS
                     RDLSLALHDELAQGTVELGAHDGQVVVGMSPDVLFGAGGGELLAPAATPLLAAVGKVS
                     VEHPSLRVLVRESGGAPVSSRLLRLGDALRERGVTGSRLVLPNAGTAPAPSTGSVAPA
                     PGSTPSDAPRPDAAPAAEAKPVAAPTAPAKYEIAFAP"
     gene            complement(2198..>2572)
                     /locus_tag="VLJ38_00140"
     CDS             complement(2198..>2572)
                     /locus_tag="VLJ38_00140"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HSU37930.1"
                     /translation="GLVWEAGRGWDRRRAIDPSLLRPLAELDGVQLHLLQRGPTLAEC
                     AELGVVSGSDDVERAASVMMALDLVISVDSMPAHLAGALARPVWTLGSQQAFRFVRIS
                     DADRLSLAEHVDLAARRGVRLN"
BASE COUNT          422 a          901 c          871 g          378 t
ORIGIN      
        1 acgtgctcaa cgtggcgggc caccgcatcg gcacggctga aatcgagagc gcgctcgtct
       61 cgcatcgtgc cgtggccgag gcggcagccg tcggccgacc cgacgagctc aaaggacaag
      121 cgctcgtcgc gttcgtgacg ctcaaacccg gccacgagcc gggcgacgcg atgaagaagg
      181 cgctggccga gcacgtggct caggagatcg gaaaattcgc gcgccccgac gacatccgct
      241 tcgccgaagg cctaccgaag acgcgcagcg gcaagatcat gcgccgcttg ctcaaagacg
      301 tcgcggccgg gcgtgaagcc cagggcgaca tctcgacgct cgaagatttg aacgtgctcg
      361 cgaagctgcg cggccaggac gagtgagcgg cggcggccga tttttcgggt attttagcgc
      421 ggttgtgcct tcgaggcatc cgcgctaaat gcgcgccggc catgctttcg tcatcgccgg
      481 cgcgcctcgt ttcgtccgcg ttgtttctga cgttcgtcac tgcgtgcggt ggtaacgaac
      541 cgccgcccaa ggacgcgagc gtcgctgacc gggcgcccaa gcaagagagc ggcggcccca
      601 ccatcagcgc cacgagcgaa atcggcggca tgaacgaaga cgacgtcgac gccgccttca
      661 aggcttcgct gaagagcttc gagcgctgcc tgaacctggg tgccaagcgc gtcgagttcc
      721 tcggcggctc ggtagcgttc ctcttgaaga tcgacggcac aggccacgtc acgagcgcgt
      781 atttcgagca ctcgacgctc ggcagccgcc ccaccgagca gtgcatgctc gacgccgttc
      841 gcgcgaagag ctggccgaaa cccgtgggcg gcgaacacgg cctcgcgcga aaatcgttcg
      901 acttcgacgc gccgaacgac gtgcgcccgc cgacgacctg ggacgaacac gaggcggctc
      961 ccggcttgaa gaagattgcg agcgaaatcg ccgagtgcaa acgcgggcgc tcgggtccgt
     1021 tcgaggcgac gctctacgtc ggcaccgacg gtaaggtgct ctccgcgagt gtgaccccgc
     1081 cggacgagga cggcgacggc gtcatcgatt gcctcgtcgg cgtcctcgaa gccgcaacct
     1141 tcccctcgcc cggcagctgg cccgcgaagg tcacgctcgc gatctagcgc gcacgctcgt
     1201 tctggagctg ccgtgcgcgc cagagccgcg cgctacgggc ggcgtctcac ggcgcgaacg
     1261 caatctcgta cttggcgggc gcggtgggcg cggcgacggg ttttgcttca gctgcgggcg
     1321 cggcgtccgg cctcggcgcg tcgctcggcg tcgaacccgg cgcgggcgcc acactgcccg
     1381 tcgacggcgc gggagctgtt cccgcgttcg gcagcaccag gcgcgagccg gtgacaccac
     1441 gctcgcgcag agcgtcgccc aaacgcaaca ggcgcgagct caccggtgcg ccccccgact
     1501 cgcgcacgag cacgcgcagc gacggatgct cgacgctcac cttgcccacg gccgcgagca
     1561 gcggcgtcgc agccggcgcg agcagctcgc cgccgccagc gccgaagagc acgtcggggc
     1621 tcatcccgac gaccacctgc ccgtcgtgcg cgccgagctc gaccgtgccc tgcgcgagct
     1681 catcgtgcag cgcgagcgac agatcacggc tcgtcgccac gagctcgtcg agcttcttgc
     1741 cggcaagctc gatgtcggcc atgcgccgct cggcgacgag caacgtctgc gccaaatcct
     1801 gcttctcgcg cgcgaaaatc atcaagtgat cgccggtgcg cgcgagctcg gagcggagct
     1861 cttcgacgag ctggacagcc gcttccttct ctttcgtggc gaccgcggtc gcgagcttcg
     1921 actcggcggc ggcgttctcg tcgacgttga ggctctgctc gcgcgccgtg agctcctgct
     1981 cgagcgcatg aatgcgatcc atcgaggctt cgagccgctg gcgcgtgtgc tcgtgcgctt
     2041 tcgcctcgct ttcggcgacg ctgcgcacct cttcgtaatt tttggcgggc acgcacccgg
     2101 tagccgagcc cgcgaccatg agcacggagg cggcgcggag cgcgaggcgt gacgtgagcg
     2161 agaacgacga caaacgagta tttttcatgc tgagccttca gttcaagcga acaccgcggc
     2221 gcgcggcgag atcgacgtgc tcggccagcg aaagccggtc ggcgtcggag atgcggacga
     2281 agcgaaacgc ctgctgcgag ccgagcgtcc acacgggacg cgcgagcgcg ccggccagat
     2341 gggccggcat gctgtcgacg gagatcacga ggtccagcgc catcatcacg ctcgcggccc
     2401 gctcgacgtc gtccgagccc gagacgacgc ccagctccgc gcattcggcg agcgtcggtc
     2461 cacgttggag caggtgcagc tgcacgccgt ccagctccgc gagcggccgc aggagtgatg
     2521 gatcgatcgc gcggcgacgg tcccatcccc gccccgcttc ccacaccagt cc
//
LOCUS       DATIML010000011         1624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2311578, whole genome shotgun sequence.
ACCESSION   DATIML010000011 DATIML010000000
VERSION     DATIML010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2311578"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..357)
                     /locus_tag="VLJ38_00145"
     CDS             complement(91..357)
                     /locus_tag="VLJ38_00145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37931.1"
                     /translation="MQARDSMKCMQYTIRKIPPALDKALKARAKQLGKSVNELALEAL
                     AQSVGEPVRRRELRRMPGSWTPADAKAFDRFLDEHRQIDAELWK"
     gene            complement(395..>1624)
                     /locus_tag="VLJ38_00150"
     CDS             complement(395..>1624)
                     /locus_tag="VLJ38_00150"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU37932.1"
                     /translation="GAEGGVRPIARIGRYALFEQFAAGGMATVHFGRLDGAGGFQRVV
                     AIKRLLPQLVMNEEFTQMLLKEARLAARVRNPNVVPTVDVVASKGDVLLVLEYVHGES
                     LSALCRTQARERRSHIPLDVAIGVMHGVLQGLDAVHEATDEQGRPLGLVHRDVSPPNV
                     IVGADGHTRVLDFGIAKALEHIEDSNPTRVKGKAGYMSPEQIRGERLTQRSDVFSAGI
                     ILWELLATRRLFMAETETERMQKILDGNYPSPSRYRPELGPALDAVAMRALALDPEQR
                     FASCHEFVVALEQAAPGASSRRIAEWVNDLAAENLAIRARMVAEVEGWMSGAPDLPLN
                     STPFAAEAAVLMTPPPPGTTNPPPSVHPPALAPLPSVPPPPVAPSFKEASAARFAPLV
                     VGAVIVAGIVATYVALR"
BASE COUNT          235 a          545 c          586 g          258 t
ORIGIN      
        1 agcacgtcgc gcacgtcctc gagctcgcct agcgcatccg acagtcgatt cgtgtcgagg
       61 agtagcttca tggggtcgtg ctgggcgccc tcacttccag agctcggcgt cgatctggcg
      121 gtgctcgtcc aagaatcgat cgaaagcctt cgcgtccgct ggtgtccacg acccgggcat
      181 gcgccggagc tctcgacgac gcacgggctc accgacgctc tgcgcgagcg cctcgagcgc
      241 gagctcgttc acgctcttgc cgagttgctt cgctcgagcc ttcagcgcct tatccaaggc
      301 gggcgggatc ttgcgaatcg tgtactgcat gcacttcatg ctatcgcgcg cctgcatgtc
      361 gtgccagcac cctcgcccac cgactgcggc gggatcagcg taacgccacg tacgtcgcga
      421 cgatgccggc cacgatcacg gcgccgacga cgagcggcgc gaagcgcgcg gcgctggctt
      481 ctttgaagct cggtgcgacg ggcggcggcg gcacggacgg gagcggagcc agcgcgggcg
      541 ggtgcacgga cggcggcggg ttcgtcgtgc cgggcggcgg cggcgtcatg agcacggccg
      601 cctcggcggc gaagggcgtg gagttcagcg ggagatcggg cgctccgctc atccagcctt
      661 cgacctccgc gaccatgcgc gcgcggatcg cgaggttttc ggcggctagg tcgttgaccc
      721 actcggcgat gcgccgcgag gacgcgccgg gcgccgcctg ctcgagcgcg acgacgaact
      781 cgtgacagct cgcgaagcgc tgttcggggt cgagcgcaag cgcgcgcatg gctaccgcgt
      841 cgagcgcggg gccgagctcg ggacggtagc ggctcggcga cgggtaatta ccgtcgagga
      901 tcttctgcat gcgctcggtc tcggtctccg ccatgaacag gcggcgcgtg gcgaggagct
      961 cccacaggat gatgccggca gagaagacgt cggagcgctg cgtgagccgt tcgccgcgga
     1021 tctgctcggg cgacatgtag ccggctttgc ctttgacgcg cgtcgggttc gagtcctcga
     1081 tgtgctcgag cgctttggcg atgccgaaat cgagcacgcg cgtgtggccg tccgcgccga
     1141 cgatcacgtt gggcggcgaa acgtcgcggt gaacgaggcc gagcgggcgg ccctgctcgt
     1201 ccgtcgcctc gtgcacggcg tcgaggccct ggagcacgcc gtgcatcacg ccgatggcga
     1261 cgtcgagcgg gatgtgagag cgccgctcgc gcgcttgcgt gcggcagagc gcgctcaagg
     1321 actctccgtg cacgtactcg aggacgagca gtacgtcgcc cttggacgcc accacgtcga
     1381 cggtgggcac gacgttcgga ttgcggacgc gcgccgcgag tcgcgcttcc ttgagcagca
     1441 tctgcgtgaa ctcttcgttc atcacgagct gcggcaggag gcgcttgatc gccaccacgc
     1501 gctggaagcc gcccgcgccg tcgagacgtc cgaagtgcac cgtggccatg ccgcccgccg
     1561 cgaactgctc gaacagcgcg tagcggccga tgcgcgcgat gggccgcacg ccaccttcgg
     1621 cgcc
//
LOCUS       DATIML010000012         2807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2023133, whole genome shotgun sequence.
ACCESSION   DATIML010000012 DATIML010000000
VERSION     DATIML010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2023133"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..1198
                     /locus_tag="VLJ38_00155"
     CDS             119..1198
                     /locus_tag="VLJ38_00155"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HSU37933.1"
                     /translation="MLRSSRVWLIALRGTALCMAALLLWRVFAAANAGRVLKLIAGAG
                     AGGLLVLCPQLVALGFEALGWQRVFRRIGVSPRWTSLLRVRIATEALAQSLPVGVAFA
                     ESVKPFLLAKHCGLKVDQSVAGMAARKVLLLLSQCLYVGGLAALGYVGLEAASVALIG
                     TPHLGWFTLGAALALGVGGTASALVLRQSVVAQSLFSLLERVPLPRVQTWLTARRRSF
                     VATDGAVSTLFRVPPRRLASALACFTCAWLLEAVETWLILSVLGVHASFVTAGSLEVI
                     LSLARNVVFVVPAGLGVQDVGYASCFAALGLPEAASLGAAFVLLKRGKELFWIAVGYG
                     LLGSDLALLRARAARPVSKLSHARA"
     gene            complement(1212..1991)
                     /gene="tsaA"
                     /locus_tag="VLJ38_00160"
     CDS             complement(1212..1991)
                     /gene="tsaA"
                     /locus_tag="VLJ38_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HSU37934.1"
                     /translation="MNELVCRPIGFVRSPFRERAEAPRQASAARDARGTIELLPGRDF
                     EHALSDLELWPYLWVIFWFHLNEGWRPKVLPPRSAKRRGVFATRAPYRPNPLGLSVVK
                     LEKVEGLVLHVSALDMLDATPVLDLKPYVPYADALTDAQGGWLETGLDPQPGFEVEIA
                     ETAARELAYLRDSWHIELESSIRRVLALGPQQHAYRRIRRVGDEFVLAVKDFRARFTV
                     DGQRIVVHAITSGYRPRELATNSAPELDAHRAFVAIATRGG"
     gene            complement(1988..>2807)
                     /locus_tag="VLJ38_00165"
     CDS             complement(1988..>2807)
                     /locus_tag="VLJ38_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37935.1"
                     /translation="ESFEETLAFLNRAAPHQYIFSCLSVFPGTKDFHAAERAGWLQRE
                     AYFTEDFQELKVPFDASEDDARLLNEWFGRNHGLQDKYSPSVADCRAVLARLGDHAPA
                     VLDLAGAHFEAGELDAAVEQARRAVALGHPTPGLAYNYLACAAYRRGDIAGMQDHFMA
                     AAKTDPQHHVLIENVEAARAWFRERGPERGVPLLLTAGHDFQLFQRNSQPALPGPLGD
                     DFADWSATPEPLGAPLSSVAQDDAGWLPDPESVMRLDVGNEPIEFRHKRLRVLE"
BASE COUNT          389 a          963 c          964 g          491 t
ORIGIN      
        1 ttgctgacga ggacgccgca gtaattttgc ggcgggcacg cgttcgtcat cagcttgctg
       61 cgggattgtg gcccgttggg aacgcgtacg cttcatccgc gcagtaatgc tgttcggcgt
      121 gctgcgctca tcgcgcgttt ggctcatcgc cctgcggggc acggccctct gcatggcggc
      181 gctgctcttg tggcgcgtgt tcgccgccgc gaacgccggg cgcgtcctga aattgattgc
      241 cggcgcagga gctggaggct tgctcgtgct ctgtcctcag ctcgtcgcgc tcggcttcga
      301 ggcgctcggc tggcagcggg tatttcggcg gattggcgtc tcgccgcgct ggacttcgct
      361 cctgcgcgtg cgcatcgcca ccgaagcact ggcgcaaagc ctgccggtcg gcgtcgcgtt
      421 cgccgagtcg gtcaagccgt tcttgctcgc gaagcactgc gggttgaagg tcgatcagag
      481 cgtggcgggc atggccgctc gcaaggtgct cttgctcctg tcgcagtgcc tgtacgtggg
      541 cgggctcgca gcgctcggct acgtcggact cgaagcggcg tccgtcgcgt tgatcgggac
      601 gccccatctc ggctggttca cgctcggcgc ggcgctcgcg ctcggtgtgg gcggcacggc
      661 gtcggcgctc gtgctccggc aaagtgtcgt cgcgcagagt ctgttctcgc tgctcgagcg
      721 cgtgccgctg ccccgcgtcc aaacctggct cacggcacgg cggcgctcct ttgtcgcgac
      781 ggacggtgcc gtctccacgc tttttcgcgt gccaccgcgt cgcctcgcga gcgcgctcgc
      841 ctgcttcacg tgcgcttggt tgctcgaagc ggtcgagacc tggctcatcc tgagcgtgct
      901 cggggtgcac gcgagcttcg tcacggcggg cagcctcgag gtgattcttt cgctcgcgcg
      961 caacgtcgtg ttcgtcgtgc cggcggggct cggcgtgcag gacgtgggct acgcgagctg
     1021 ctttgccgcg ctcggcctgc cggaagcggc gagcctcggc gcggccttcg tgctgctcaa
     1081 gcgcggcaag gagctctttt ggatcgcggt cggctacgga ctgctcggct ccgatctggc
     1141 gctcctgcgt gcacgcgcgg cgaggcccgt ctcgaagctc tcgcacgccc gggcatgacc
     1201 gcgcggcgcg ttcacccgcc gcgcgtcgca atggccacga acgctcgatg cgcgtcgagc
     1261 tccggcgccg agttcgtcgc gagctcgcgc ggacgataac cgctcgtgat ggcatgcacg
     1321 acgatgcgct gtccgtccac cgtaaaacgt gcccgaaagt ctttgaccgc gagcacgaac
     1381 tcgtcgccga cccgccggat gcgccggtac gcatgctgct gcggaccgag cgcgagcaca
     1441 cgccggatcg agctttcgag ctcgatgtgc cagctgtcgc gcagatacgc gagctcgcgc
     1501 gccgccgttt ccgcgatttc gacctcgaag cccggctgcg gatccagccc ggtttcgagc
     1561 cagccgccct gagcgtccgt gagcgcgtcg gcgtacggca cgtacggctt gagatcgagc
     1621 accggtgtcg cgtcgagcat gtcgagcgcg ctcacgtgca gcacgagccc ctccaccttc
     1681 tcgagcttga cgacgctgag ccccagcgga ttcggccggt acggcgcgcg cgtcgcgaac
     1741 acgccgcgcc gcttcgcgct gcgcggcggt agcaccttcg gtcgccagcc ctcgttcagg
     1801 tgaaaccaga aaatcaccca caagtacggc cagagctcga ggtccgagag cgcgtgctcg
     1861 aagtcgcgac ccggcaaaag ctcgatggtg ccccgcgcgt cacgagcggc cgaggcttgg
     1921 cgcggcgctt cggcccgctc ccgaaacggc gagcgcacga agccaatcgg cctgcagacg
     1981 agctcgttca ctcgaggacc cgaagccgct tgtgccgaaa ctcgatgggt tcgttgccca
     2041 cgtcgagccg catcacgctc tcgggatccg gcaaccagcc cgcgtcgtct tgcgccaccg
     2101 agctcaaggg cgccccgagc ggctcgggcg tcgcgctcca gtcggcgaaa tcgtcgccga
     2161 gcggcccggg cagcgccggc tggctgttgc gctgaaacag ctgaaaatcg tggcctgccg
     2221 tgagcaggag cggcacgccg cgctcggggc cgcgctcgcg gaaccacgcg cgcgccgcct
     2281 ccacgttttc gatcaacacg tgatgctgcg gatccgtctt ggccgcggcc atgaagtgat
     2341 cctgcatgcc cgcgatgtcg ccgcgccggt acgcggcgca cgcgaggtaa ttgtaggcga
     2401 gcccgggcgt cggatgcccg agcgcgacgg cgcgccgagc ctgttcgacc gctgcgtcga
     2461 gctcacccgc ctcgaagtgc gcgccagcga gatcgagcac ggcgggcgcg tggtcaccga
     2521 gcctggcgag cacggcgcga cagtccgcga cgctcggcga gtatttgtct tgcaggccgt
     2581 ggtttcggcc aaaccactcg ttgagcaagc gcgcgtcgtc ttcgctcgcg tcgaagggca
     2641 ccttgagctc ctgaaaatcc tccgtgaaat acgcttcccg ctgcagccaa cccgcgcgct
     2701 cggccgcgtg gaaatccttg gtacccggaa agacggagag acaggagaag atgtattggt
     2761 ggggcgcggc gcggttcaaa aaagcgagcg tctcctcgaa gctttcg
//
LOCUS       DATIML010000013         4284 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3178419, whole genome shotgun sequence.
ACCESSION   DATIML010000013 DATIML010000000
VERSION     DATIML010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3178419"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1100
                     /locus_tag="VLJ38_00170"
     CDS             27..1100
                     /locus_tag="VLJ38_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37936.1"
                     /translation="MSRSFALVSSLPLALALFTGCPSRETLGTTSMSIVGAGVVNDPA
                     NKSLRFDMLKFGLDSFCHEMLKSGTPLKLADDNPVVGRFFATSCQSQVIDEEQRKSFI
                     VQYQGKGYAWGGPFGRVGFEAAGLVEYAPDFLLHGGTLYVYFRPRLVDTSRFTLLNVE
                     SKLAQTVVSAAGLNPEAFGKQIVDSELRRGFTVVRAGSSGETEFGTGIIPAGERPFHP
                     FQVQSSDKRVVVNERTEIHTGQQDYIGPFDVDGKGQALYLTLSVDGAPSVEARLLPQA
                     EGDTLVDSYIRTPGPKTGAGRPLFDERVTQGQVFRRFVPVPAGRYYLLLDHGDPQGHG
                     PAPDMTTDQAAKIDYLILLGDAP"
     gene            1115..2422
                     /gene="lepB"
                     /locus_tag="VLJ38_00175"
     CDS             1115..2422
                     /gene="lepB"
                     /locus_tag="VLJ38_00175"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:NF021981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HSU37937.1"
                     /translation="MNTTAMNPKVYRFVVWPIWFVLVPLVLAHFAVVLLSPGASFEPV
                     TLLDRVLWAIEDQPIPATIGFFTLFEMLIYHYRHLLPFAGAEARADVPADARRELERA
                     AQLLDEAERVMRRERHAFEKNVPASAREELLDELEALRRAIGKSPFDREAFESAHERA
                     ARLVHKHLGRWQKGELREYVESIAVAIGVALLLRAFVVEAFKIPSGSMLPTLQIQDHI
                     FVNKLAYGPLVPFTSYRLFNRLPPARGDVMVFIYPDTNPEAPSQDFIKRVIALPGDTL
                     AVENGHPIINGWRVPSCHVGEYTYQEGSDAPMKRGDLFVEYLGERAYLTQYEDNRADG
                     RQGPYHVKPGETWVLGDNRNNSMDSRAWAGGRGAGVPDANIKGRAMFVWWGVALDRLF
                     MNVLGTPRLPKGAPPQIVSGIDACIAKRPPLSETTPPAPNAAQ"
     gene            2632..3306
                     /locus_tag="VLJ38_00180"
     CDS             2632..3306
                     /locus_tag="VLJ38_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37938.1"
                     /translation="MGLVLGALLACKKKPEPAPAPSAAATVPAAPAASSAASAAGTAS
                     AAPVPTVEAKLGDVKRYGVEKEVRLDDAGVRVTADELKVYDQADTKTDDVAVLPKGAL
                     VFRQVKMDDFTLIEFPSGVGQFSQGWVETKGLSTTVEKVTRAAALSENKTATVKTKDG
                     GAPAPADAGAAKDAGAAKDAGAAKDAGAAKKETSPKPEPPPVPDKKKAAADKKAADAK
                     AAEKAK"
     gene            complement(3308..3682)
                     /locus_tag="VLJ38_00185"
     CDS             complement(3308..3682)
                     /locus_tag="VLJ38_00185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37939.1"
                     /translation="MPHPLDLIALVLGILFTLRQMDVTQRQAKNYPGVREADFTRWWQ
                     RARGAYRLGSSVCFGKILLDIGMAYTMRRVPMPSSMRIGIGLTLDLTWVALVVFSVLR
                     SQRAHALARELGIEMRVRSSGT"
     gene            complement(3950..4147)
                     /locus_tag="VLJ38_00190"
     CDS             complement(3950..4147)
                     /locus_tag="VLJ38_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37940.1"
                     /translation="MVSDGKLERVISDRYAGWKSPLGESIMGGKVSLKDLSDQVLTKG
                     INPRHRSGQQEFLENLVNRYL"
BASE COUNT          751 a         1415 c         1433 g          685 t
ORIGIN      
        1 cgcgatgatg ctacgctcgc cccgctttgt cgcggagctt cgcgctcgtt tcatccctgc
       61 cgctcgcgct cgcgctcttc accggctgcc cgtcgcgcga gaccctcggc acgacttcca
      121 tgtccatcgt cggcgcgggc gtcgtgaacg acccggccaa caaatcgctg cgcttcgaca
      181 tgctgaagtt cggcctcgac agcttctgcc acgagatgct gaagagcgga acgccgctca
      241 aactcgcgga cgacaacccc gtcgtcgggc gcttcttcgc gacgagctgc cagtcacagg
      301 tgatcgacga ggagcagcgt aaatcgttca tcgttcagta ccagggcaag gggtacgcct
      361 ggggcgggcc gttcgggcgt gtcggcttcg aagcggcggg gctcgtcgag tacgcgcccg
      421 attttctgct gcacgggggc acgctgtacg tctacttccg ccctcggctc gtcgacacga
      481 gccgcttcac gctcctgaac gtggagtcga agctcgcgca aacggtcgtg agcgccgccg
      541 gcttgaaccc ggaagctttc ggtaagcaga tcgtcgacag tgagctccgg cgcggcttca
      601 cggtcgtgcg ggcaggctcg agcggtgaga ccgagttcgg tacgggcatc atcccggcgg
      661 gggaacgccc ctttcatccg tttcaggtgc aaagctcgga caagcgcgtc gtcgtcaacg
      721 agcgcacgga aatccacacg ggccagcagg attatatcgg gccgttcgac gttgacggga
      781 aaggccaggc cctctacctc acgctttcgg tggacggggc gccgtccgtc gaggcccgct
      841 tactgccaca agccgagggc gacacgctcg tcgacagcta catccgcacg ccaggaccga
      901 aaaccggggc aggaaggccc ttgttcgacg agcgcgtcac gcagggacag gttttccgcc
      961 gtttcgtgcc ggttccggcc ggtcgctact atttgctgct ggaccacggc gatcctcagg
     1021 gtcatggtcc ggccccggac atgaccacgg atcaggcggc caagatcgac tacctcatcc
     1081 tgctcggcga cgcgccttga atcccccacc ccgcatgaac accaccgcca tgaatccgaa
     1141 ggtctatcgc ttcgtggtct ggccgatttg gttcgtgctc gtgccactcg tgctcgccca
     1201 cttcgccgtg gtgctcctga gccccggcgc gagcttcgag cccgtgacgc tgctcgatcg
     1261 cgtgctctgg gcgatcgagg atcagccgat cccggcgacg atcggctttt tcacgctgtt
     1321 cgagatgctc atctaccact accggcacct cttgcccttc gccggcgccg aggcgcgcgc
     1381 ggacgtgccc gccgacgcgc gacgcgagct cgagcgcgcg gcgcagctac tcgacgaggc
     1441 cgaacgcgtg atgcgccgcg aacggcacgc gttcgagaag aacgtccccg cgagcgcgcg
     1501 cgaagagctg ctcgacgagc tcgaggcgct gcggcgcgcg atcggcaaga gccccttcga
     1561 ccgcgaagcg ttcgagtccg ctcacgagcg cgccgcgcgg ctcgtccaca agcacctcgg
     1621 ccgctggcaa aaaggcgagc tccgcgagta cgtcgagtca atcgccgtgg cgatcggcgt
     1681 ggcgctgctc ttgcgcgcgt tcgtcgtcga agccttcaag atcccgagcg gctcgatgct
     1741 gccgacgctg cagatccaag atcacatttt cgtgaacaag ctcgcctacg gcccgctcgt
     1801 tccgttcacg agctaccggc tcttcaatcg cctaccgccc gcgcgcggcg acgtgatggt
     1861 cttcatctat ccggacacga acccggaagc gccgagccag gacttcatca aacgcgtgat
     1921 cgcgctcccg ggcgacacgc tggccgtcga aaacgggcat ccgatcatca acggctggcg
     1981 cgtgccgagc tgccacgtcg gcgagtacac gtaccaggag ggcagcgacg ccccgatgaa
     2041 gcgcggcgat ctgttcgtcg agtacctcgg cgagcgcgcg tacctgacgc agtacgagga
     2101 caatcgcgcc gacggccgac aggggccgta tcacgtgaag cccggcgaga cttgggtgct
     2161 cggcgataac cgcaacaaca gcatggactc gcgcgcgtgg gccggcggac ggggcgccgg
     2221 tgtgccggac gcgaacatca agggacgcgc catgttcgtg tggtggggcg tcgcgctcga
     2281 ccgcttgttc atgaacgtac tcgggacgcc gcggctgccg aaaggcgcac cgccccagat
     2341 cgtgtcgggc atcgacgcct gcatcgccaa gcgaccacca ctcagcgaaa ccacaccgcc
     2401 cgcgccgaac gccgcgcagt aacgctgcgt ctcgaagcgc gcctgcgcag gtcggcgggc
     2461 cgagctcacg cagcgacgtg agctcgtgaa ggaaatcttg cgtcgcgcgt cctgagcgac
     2521 ggagcgcccc agttgctatg ccccgcatgc cgggtggagt aagtaacgtc ggggtcaaca
     2581 tcaggaggaa tgcgaatggc gcttgctcag cgttcgacgg cagcaatctc aatgggactc
     2641 gtgctcgggg ccttgctcgc ctgtaaaaag aagccggaac ccgcccccgc accttccgcc
     2701 gccgcgaccg ttccggccgc gcccgccgct tcgtcggcgg cctccgctgc tggcactgcc
     2761 tccgcagcgc ccgttcccac cgtcgaggcg aagctcggtg acgtaaagcg atacggcgtc
     2821 gaaaaggaag tccgactcga cgacgccggc gtgcgcgtga cggcggacga gctcaaggtc
     2881 tacgaccaag ccgatactaa gaccgacgac gtcgccgtgc tgccgaaggg cgcgctcgtg
     2941 ttccggcaag tgaagatgga cgactttacg ctcatcgagt tcccctccgg cgtcggccag
     3001 ttctcgcagg gctgggtcga aaccaagggc ctgtcgacga cggtggaaaa ggtgacgcgc
     3061 gcggcagcgc tcagcgaaaa caagaccgcg accgtcaaga cgaaagacgg cggcgcaccc
     3121 gcacccgcgg acgccggcgc tgcgaaggac gccggcgctg cgaaggatgc cggggccgcg
     3181 aaggacgccg gggccgcgaa gaaggagacg agcccgaagc ccgaaccgcc gcccgtcccc
     3241 gacaagaaga aggcggccgc cgacaagaag gccgccgatg caaaggcagc cgaaaaggcg
     3301 aagtaaccta cgtcccgctg ctgcgcacgc gcatttcgat gccgagctcg cgagcgagcg
     3361 cgtgcgcgcg ttgtgagcgg agcacggaga atacgacgag cgcgacccag gtgagatcga
     3421 gcgtgagtcc gatgccgatg cgcatggacg aaggcatcgg cacgcggcgc atcgtgtagg
     3481 ccatgccaat atcgagcagg attttgccga agcaaaccga cgagccgagc cggtaggcgc
     3541 cgcgggctcg ctgccaccag cgagtgaagt cggcctcacg cacgcccggg tagtttttgg
     3601 cttggcgctg cgtcacgtcc atctgccgga gcgtgaagag gatgccgagg acgagcgcga
     3661 tcaggtcgag cgggtggggc aagtggctcc cgccgttagc agcgaatcgc gaccctgcca
     3721 acgaggtccg actgagcgtg aaattggctc aggttgtgcc agcgcgaact gtctgatttc
     3781 cggcgtttcc gcggcgctgc gccgcggcac gtgacttgca cattgggcgg tcacttggtc
     3841 gggagagggt gttcagctcg gctggcgacg gtgggtaggg ggggcttttt ttgcaagccc
     3901 ccggctctcg tcgagtcacg agagccggac gccgggcgag ctcgtcggct caaaggtagc
     3961 ggttgacgag gttctcgagg aactcttgct ggccggagcg gtggcgcggg ttgatgcctt
     4021 tcgtgagcac ctggtccgag agatccttga ggctcacctt gccgcccatg atgctttcgc
     4081 cgagcgggct cttccagccg gcgtagcggt cgctgatgac gcgctcgagc ttgccgtcgg
     4141 aaaccatgcg gtcggatgat gagaccgcgc gccagcgtgt cgaggccgcc gatgtgagcg
     4201 tgaaacaggt cggcggggtc gatgctctgg cgccggagct ttgcgtcgaa gttcataccg
     4261 cccgtcgtga agccgccgcc cttg
//
LOCUS       DATIML010000014         4355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4044845, whole genome shotgun sequence.
ACCESSION   DATIML010000014 DATIML010000000
VERSION     DATIML010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4355
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4044845"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..804)
                     /locus_tag="VLJ38_00195"
     CDS             complement(37..804)
                     /locus_tag="VLJ38_00195"
                     /EC_number="3.1.4.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004114 - 3',5'-cyclic-nucleotide
                     phosphodiesterase activity [Evidence IEA];
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-nucleotide phosphodiesterase"
                     /protein_id="HSU37941.1"
                     /translation="MELRVIGCHGGETPNHRTSAFVLDERLAIDAGSLTSGLDLAAQF
                     RLGACLVSHAHLDHVRDLATIADNRCQADCEPLVVAATASTLKVLKKHFFNNLLWPDF
                     TEIPNKTRPTLRFVELKPEKRAEIGGYQVRTVLVSHTIESSGFIIEGPDATIGYSGDT
                     GPTDRLWELLNKEKNLKALLLEVSFPDREQRLATVSGHHTPRTLLKDLKKYARPKDLP
                     ALLYHIKPVFQSEVEQECARLKGVNLTVTALGDQYVL"
     gene            1033..1106
                     /locus_tag="VLJ38_00200"
     tRNA            1033..1106
                     /locus_tag="VLJ38_00200"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1065..1067,aa:Gln,seq:ctg)
     gene            1123..1194
                     /locus_tag="VLJ38_00205"
     tRNA            1123..1194
                     /locus_tag="VLJ38_00205"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1156..1158,aa:Glu,seq:ctc)
     gene            complement(1258..2130)
                     /locus_tag="VLJ38_00210"
     CDS             complement(1258..2130)
                     /locus_tag="VLJ38_00210"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HSU37942.1"
                     /translation="MSSGAKLVALIEATLRGATPEARDFYQREYSAARELLAAGQSAS
                     AVADVQLRAADRLDPLVAELTRARPPACSEGCSRCCHGLKIEASAPEAVAIAEFLSGL
                     APDELAQTREQMREEADYARTLDADARWREQVPCAFLEDATGQCVIYDVRPFTCRAHT
                     SMSVERCDAAARDPERRTPIDKHLVPASVFGMAKAAITMACAEANLDPRSFELTNAVS
                     VALNEPRAAERWAAGEPVFDAAVTPSDDLDAELSLRNLAQAGLLPPERLLKRPSNRTE
                     RNAAKRERRGRRER"
     gene            2178..2468
                     /locus_tag="VLJ38_00215"
     CDS             2178..2468
                     /locus_tag="VLJ38_00215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37943.1"
                     /translation="MSVDTDDETRRRVLELLDDAHTFDELRRSFQAQMSLVTARPALL
                     EGALRFLEHGDATGLDAELQERFAQVLSRFVESSRALELAGKLEAGDAAQRC"
     gene            2507..3295
                     /locus_tag="VLJ38_00220"
     CDS             2507..3295
                     /locus_tag="VLJ38_00220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37944.1"
                     /translation="MAWKSTIPWLSSGAVIALGYLWARRTTGPRGALPQLSRDAAPGS
                     QESELRDINFDPDVNLDAIAHADAVHDMGRLDDNADFDAHTKGEAVDERDPLDLDLDF
                     DVDVDVDPSLEMNATVGPTEHAVPADEPYDALDAEDVGTAFLRRATQVEPTEDLDVTE
                     ALEGTHEIVEGDPALMDLARESDYGANQTGESLAPYAGTHDEDVATELPVGTLDSVGN
                     AEFHAPLNPPDALKAPPTSTLSPTEEEMARRDAAHVADQHGSRR"
     gene            complement(3350..3598)
                     /locus_tag="VLJ38_00225"
     CDS             complement(3350..3598)
                     /locus_tag="VLJ38_00225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37945.1"
                     /translation="MNENQSNATSANSGGGAEMSQDVLIVVSKLKAYIKSKSGMNTSD
                     GIVPVLSNLVREICDRAIESARSDGRKTVLDRDIKPAG"
     gene            complement(3862..>4355)
                     /locus_tag="VLJ38_00230"
     CDS             complement(3862..>4355)
                     /locus_tag="VLJ38_00230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HSU37946.1"
                     /translation="GALGVPLGRRFKAMGLRSVLEFRTSSYVPEWASGTDLTGYVARY
                     NPDLVIVTLGANEFDLQNPEQRAGAVKRLVRELGGRPCVWITPPRWKQDTGILAVIQQ
                     NVKPCRFLDSDTVVHDLERKRDGIHPSDAAREVWADAVLAWLERERRGEGERPWELKE
                     ERP"
BASE COUNT          707 a         1461 c         1426 g          761 t
ORIGIN      
        1 cgacgccgcg gcggcgtgca tcggaccgta acgcgcctag agcacgtact gatcgccgag
       61 cgccgtgacg gtgaggttca cgcccttgag ccgcgcgcac tcctgctcca cctcggactg
      121 gaacacgggc ttgatgtgat agagcagtgc cggaaggtct ttcggccgcg cgtacttctt
      181 cagatccttc aggagcgtgc gcggcgtgtg gtggccgctc accgtcgcca gccgctgctc
      241 gcgatcgggg aagcttactt ccagcaaaag cgccttgagg ttcttctcct tgttgaggag
      301 ctcccacagg cgatcggtcg ggcccgtgtc gccgctgtag ccgatcgtgg cgtcggggcc
      361 ttcgatgatg aagccggagg actcgatggt gtggctcacg agcacggtcc gcacctggta
      421 gccgccgatt tcagcgcgtt tctcgggttt gagctcgacg aagcgtagcg tgggccgcgt
      481 cttgttcggg atctcggtga agtcgggcca gagcaaattg ttgaagaagt gcttcttcag
      541 caccttgagg gtcgaggcgg tggcggcgac cacgagcggc tcgcagtccg cctggcagcg
      601 gttgtcggcg atggtcgcga ggtcacggac gtgatcgagg tgggcgtggc tcaccaagca
      661 ggcgccgagg cggaactgcg cggcgagatc gagcccgctc gtcagcgacc cggcgtcgat
      721 ggccagacgt tcgtccaaaa cgaacgcact ggtgcggtgg ttgggcgtct ccccgccgtg
      781 acagccaatg acccggagct ccatggatcg cggtttcctg ggccagaagc tcgctagccc
      841 aaggccgaca tgggacagag agcgtatcgt gtagcgtacc cctcggtcaa agacggagca
      901 caccccgagc ggccagacgg ccgtgatcac gcattcccct tgcccgatcc ccgcgttaga
      961 gctaaaagcc cgcccctgct tcgggtacga acccgaggcg gttcgtctag ccattcccgg
     1021 tacttttccc tttgggggat cgtctaacgg caggacgcaa gattctggct cttgctatct
     1081 aggttcgaat cctagtcccc cagccacgca gcatcgacac caggccccat cgtctagcgg
     1141 ttaggacatc ggcctctcac gccggtaacg cgagttcgat tctcgctggg gtcacaagac
     1201 tcgtgagaac gcggagccgc cccaatcggg cggctttcgt gttttgtaag gtccgcgtca
     1261 tcgttcgcgg cgtcctcgcc gttcgcgctt ggcggcgttg cgctcggttc ggttgctcgg
     1321 gcgcttgagc agccgctcgg gtgggagcaa gcccgcctgg gcgaggttcc ggagcgacaa
     1381 ctcggcgtcc aggtcgtcgc tcggcgtgac ggcggcgtcg aagacgggct cacccgccgc
     1441 ccagcgttcg gccgcgcgcg gctcgttcag cgcgacggag acggcattgg tgagctcgaa
     1501 gctgcgcggg tcgaggttcg cttcggcaca cgccatggtg atcgccgctt tggccatgcc
     1561 gaagacggac gcggggacca agtgtttgtc gatcggtgtg cggcgctcgg gatcgcgcgc
     1621 tgcggcgtcg caccgttcga cgctcatgga ggtgtgggcg cggcaggtga acgggcgcac
     1681 gtcgtagatg acgcactgtc ccgttgcgtc ttcgagaaaa gcacacggca cttgttcgcg
     1741 ccagcgcgcg tcggcgtcga gcgtgcgcgc gtagtccgct tcctcacgca tctgctcgcg
     1801 cgtttgggcg agctcgtcag gcgcgaggcc actcaagaat tcggcgatgg cgacagcttc
     1861 gggcgcgctc gcctcgatct tcaacccgtg gcagcagcgc gagcaaccct cgctacaggc
     1921 gggcggccgg gcgcgcgtca actcggccac gagcgggtcg agacgatccg cggcacgcaa
     1981 ctgcacatcg gcgacagccg acgcggattg ccccgccgcg agtagctcac gcgccgcgct
     2041 gtattcgcgc tggtagaagt cgcgcgcttc gggcgtggcg ccgcgcagcg ttgcctcgat
     2101 cagtgcgacg agcttcgcgc ccgaactcat ccgctgagta tcccacgaag ccgccgtcgc
     2161 gaagttcgac tacattcgtg agcgtggaca ctgacgacga gacgcgacgg cgagtcctcg
     2221 agttgctgga cgacgcccac accttcgacg agctccggcg cagttttcag gctcaaatgt
     2281 cgctggttac ggctcgtccc gccttgctcg agggcgcgct gcgcttcctc gaacacggtg
     2341 acgcgacggg tctcgacgcc gagctgcaag agcggtttgc gcaggtgctg agccgcttcg
     2401 tcgagagcag tcgagcgctc gagctcgccg gaaagctcga ggccggcgac gccgcccagc
     2461 gctgttgagc tccgcctccg gcccacgtct tgctttgtgt gtcggcatgg catggaaatc
     2521 aacgattccc tggctcagca gcggtgcggt gattgcgctc gggtacctgt gggcgcggcg
     2581 cacgactggg ccgcgcggag ctttgcctca gctgtcgcgg gacgccgcgc ccggcagcca
     2641 agagagcgag ctccgcgaca tcaacttcga tcccgacgtg aacctcgacg caatcgcgca
     2701 cgccgacgca gttcacgaca tgggccggct cgacgataac gccgacttcg acgcccacac
     2761 caagggtgaa gcggtcgacg agcgtgatcc cttggacctc gacttggatt tcgacgtcga
     2821 cgtggacgtg gacccgtcgc tcgaaatgaa cgcgaccgtt gggccaaccg agcacgccgt
     2881 gcccgccgac gaaccctacg atgcgctcga cgccgaggac gtcggcaccg cgttcctccg
     2941 gcgcgcaacg caggtcgagc ccaccgagga tctcgacgtg accgaggcgc tcgaaggcac
     3001 gcacgagatc gtcgaaggtg accccgcact catggatctc gcgcgcgaaa gcgactacgg
     3061 cgccaatcaa accggtgagt cactcgcgcc ctacgccggc acgcacgacg aggacgtcgc
     3121 gacggagctc ccggtcggca cgctggattc agtgggaaac gccgagtttc acgcacccct
     3181 caatccccca gacgccctca aggcgccgcc caccagcacg ctttctccca ccgaggagga
     3241 gatggcgcgc cgtgacgcgg cgcacgtcgc cgatcaacac ggctcacggc gctagccgcg
     3301 ggcgacccgc ccggcgagcg ggacgcccgt caagcgatgg gtgccccgct caaccggcgg
     3361 gcttgatgtc acgatcgagc accgtcttgc gcccgtccga gcgagcgctc tcgatggcgc
     3421 gatcgcagat ctcgcgcacg agattcgaca ggacgggcac gatgccgtcc gacgtgttca
     3481 tcccggattt cgatttgatg tacgccttga gcttggagac gacgatcaaa acgtcctggg
     3541 acatttccgc gccgcccccg ctgttcgcgc tggtcgcatt ggattggttc tcgttcacga
     3601 ttcgttcctc cgctgacttc gcggcacttg ccgcttcctc cgcctgttgc aactcccatt
     3661 ccgcccgcgt gggggccctg gccgtctcgg cccaggcttc gcggtgtcgc atcatgggca
     3721 ggtgtgcgtc ccaacattcg acagaacaga aatacaggcc cgtcttcccg cgttgacagg
     3781 tcgagacgct gcattggtag tagctcgccc cgaaggcgat cggcttccgg caggtgctgc
     3841 aaaccttgaa ctgctcggac actagggccg ttcctccttg agctcccagg ggcgctcacc
     3901 ttcgccccgc cgctcgcgtt cgagccaggc gagcaccgca tcggcccaga cttcccgagc
     3961 cgcgtcgctc gggtggatgc cgtcgcgctt gcgctcgaga tcgtgcacga ccgtgtccga
     4021 atcgaggaag cgacacggct tcacgttttg ctggatcacc gccaaaatcc cggtgtcctg
     4081 cttccagcgc ggcggtgtga tccacacaca gggccgcccg ccgagctcgc gcacgagcct
     4141 cttcacggca ccggcgcgct gctcgggatt ttgcagatcg aattcgttgg cgccgagcgt
     4201 cacgatcacg aggtccgggt tatagcgcgc cacgtagccc gtcaggtccg tacctgaagc
     4261 ccactccggc acatagctcg aggtgcgaaa ttcgagcacg ctccggagcc ccatcgcttt
     4321 gaagcgccgg ccgagcggca cgccgagcgc ccccg
//
LOCUS       DATIML010000015         3189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_868915, whole genome shotgun sequence.
ACCESSION   DATIML010000015 DATIML010000000
VERSION     DATIML010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_868915"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VLJ38_00235"
     CDS             complement(<1..228)
                     /locus_tag="VLJ38_00235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37947.1"
                     /translation="MMQPNNTVGLLAGHRAALAFSAVPADVAVYREGSAARSVACFIE
                     RRRDGRLWVVDVRGETPVELVRAFPWSAPSRY"
     gene            complement(215..2488)
                     /locus_tag="VLJ38_00240"
     CDS             complement(215..2488)
                     /locus_tag="VLJ38_00240"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSU37948.1"
                     /translation="MSPKSQLTDDELFARYLGQPSALPPAVRRLAEDALGGPVVLYAL
                     ADLDAELRFREYWLALGEERVAVVAAGFVSSFPRSAVTAVSCEAGLSSRVLRLHAETG
                     QAPLAELYFTQRQRRAIDAIAFVLEQALEGRRVTVQAADDAYRNGLLDPVREAQALVA
                     PNKLAVVWRLLAYLGRYRARVTFGTTAALAIAVLSMLPPFITGRLVDRVIGPVQRGEV
                     TVSAVAKSAWLGVLAIGLVYAARQVCLWVRLRSMAELGELVAGDLRDEVYAHLQRLSV
                     SFFSRKKTGSLITRVSSDTDRLWEFLAFGVVEVSLSFVMLVCLGVVLISLDVRLGLVL
                     TLPVPVLCYAIYRNGQNMERLFVRAWRKWSRVTDLLSDTIPGMRVVKAFNQENHENRR
                     FGDKNHDVVGEFNRIHAAWTSFWPRLTFGIQLTALCVWIFALPRLFGEHTWFGGPLSL
                     GTFVSFLLYAAMFVQPIETVGQVARILHRATTSAHRVFEVLDTKPEVVDRADPVRLGR
                     LRGDIEFRDVSFSYDGARQVVRGLSFHVRPGELIGLVGPSGGGKSTLANLLTRFYDVT
                     SGAVLIDGIDVRALDSGEYRRQVGIVLQDPYLFHGSVLENIRYGMPEATLDEVIVAAR
                     AANAHDFVCKLPLGYDTLVGERGHTLSGGERQRVSIARAILRDPRVLILDEATSAVDT
                     ETELKIQQAMDRLVAGRTVFAIAHRLSTLRKASRLFVIENGKLSEQGTHAELVQRPNG
                     TYRKLFTLQQELQHDAA"
     gene            3006..>3189
                     /locus_tag="VLJ38_00245"
     CDS             3006..>3189
                     /locus_tag="VLJ38_00245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37949.1"
                     /translation="MSARRNQATARGAKAKTLKIHWLFGFQLLVACTGSITEPVGSDA
                     NSGGSTSSSMGGTGAAG"
BASE COUNT          586 a         1067 c         1052 g          484 t
ORIGIN      
        1 ataacgactc ggcgcgctcc acggaaacgc acgcacgagc tcgaccggcg tctcgccccg
       61 cacgtcgacg acccaaagcc gcccgtcacg ccgccgctcg atgaagcaag cgacgctccg
      121 cgcagccgaa ccttcccggt agacggcgac atccgccggc acggcgctga aggcgagcgc
      181 cgcgcggtgg cccgccaaga gtccgaccgt attgttaggc tgcatcatgc tgaagctcct
      241 gttgcagggt aaaaagcttg cgatacgtgc cgttcggccg ctggacgagc tcggcgtgcg
      301 tgccctgctc gctgagcttg ccgttttcga tcacgaacag gcgggaggct ttgcgcaacg
      361 tggacagacg gtgcgcgatg gcgaacacgg tacgtcccgc gacgaggcga tccatcgctt
      421 gttggatctt tagctccgtc tcggtatcga cggcgctcgt cgcttcatcg aggatcagca
      481 cacgcgggtc gcgcaagatg gcccgcgcga tgctcacgcg ctgccgctca ccgcccgaga
      541 gcgtgtgacc gcgctcgccg accagcgtgt cgtagccgag cggcagctta cagacgaagt
      601 cgtgcgcgtt cgcggcacga gccgccacga tgacctcgtc gagcgtcgcc tcgggcatgc
      661 cgtagcgaat gttttcgagc acgctgccgt gaaataggta cggatcctga agtacgatgc
      721 cgacttggcg gcggtattcg ccactgtcga gcgcgcgcac gtcgatgccg tcgatgagca
      781 cggcgccgct cgtcacgtcg taaaagcgcg tcaaaaggtt cgcgagcgtg ctcttgccgc
      841 cacccgacgg cccgacgagc ccgatgagct cacccggacg cacgtggaac gagagcccgc
      901 gcaccacttg ccgcgcgccg tcgtagctga agctcacgtc gcgaaactcg atgtcgccgc
      961 gcagccgtcc gagccgtacg gggtccgcgc ggtcgacgac ctcgggcttg gtgtcgagca
     1021 cctcgaacac gcggtgcgcc gaggtcgtcg cgcgatgcaa aatgcgcgcg acttgaccga
     1081 cggtctcgat cggctgcacg aacatggccg cgtacagcaa gaacgagacg aacgtgccga
     1141 ggctcagggg cccgccgaac cacgtgtgct cgccgaagag gcgcggcagc gcgaagatcc
     1201 agacgcacag cgccgtgagt tggatgccga acgtcaggcg tggccagaag ctcgtccagg
     1261 cggcgtggat gcggttgaac tcgcccacca cgtcgtggtt cttgtcgccg aagcgtcggt
     1321 tttcgtgatt ttcctggttg aaggccttca cgacgcgcat gccggggatg gtgtcggaca
     1381 agagatcggt cacgcgcgac catttgcgcc aggcgcgcac gaacagccgc tccatgttct
     1441 gaccgttccg ataaatcgcg taacagagga cgggcacggg cagcgtcaag acgagcccga
     1501 gccgcacatc gagcgaaatc aagacgacgc cgaggcacac gagcatcacg aacgacagcg
     1561 agacctcgac cacaccgaac gcgagaaatt cccagagtcg atccgtgtcc gagctcacgc
     1621 gcgtgatgag gctgccggtc ttcttacgcg agaagaagct cacgctcagc cgctgcaggt
     1681 gcgcgtacac ctcgtcgcgc agatcgccgg cgacgagctc accgagctcg gccatcgagc
     1741 gcagccgcac ccacaggcac acctgccgcg cggcgtacac gagcccgatc gccaagactc
     1801 cgagccacgc gctcttggcc acggcgctga cggtgacctc gccgcgctgc acgggcccga
     1861 tcacgcggtc gacgagccgc cccgtgatga acggaggcag catggaaagc acggcaatcg
     1921 cgagcgcggc cgtcgtgccg aacgtcacgc gcgcccggta gcgacccaaa taggcgagca
     1981 gccgccacac cacggcgagc ttgttcggcg cgaccagggc ttgagcttcg cgcaccggat
     2041 cgagcagtcc gttacggtag gcgtcgtcgg ccgcctgcac cgtcacccgc cgcccctcga
     2101 gcgcctgctc gagcacgaag gcaatggcgt caatcgcgcg gcgctggcgt tgcgtgaagt
     2161 agagctcggc gagcggcgct tgacctgttt ctgcgtgcaa gcgcagcaca cgtgacgaga
     2221 gccccgcttc acagctcacc gccgtgacgg cagagcgcgg aaagctcgaa acgaaacccg
     2281 ccgcgacgac cgccacgcgc tcttcaccga gcgccagcca gtattcgcga aagcgcagct
     2341 cggcgtcgag atccgccagt gcgtagagga cgacgggccc gccgagtgcg tcctccgcca
     2401 gacgccggac ggcgggcggc agagcgctcg gttgcccgag ataccgggcg aagagctcgt
     2461 cgtcggtcag ttgagatttg ggggacatta aggcttgatt cctgctgctg catcagccca
     2521 ccgagtcatt cggacccggg gcttgcggcg ggaatcagag ccctaggtcg tggtgtgcgc
     2581 ggcgacgcac ggtcgaataa cgacggcccg ccgcgggacg actgcaaacg gcaggcaacg
     2641 tcgctcgacg tcgttgtgca tactgccgtt catcgtttca tcctcagcca ccacaaaaag
     2701 aagttctcgc gcccgagacg gtgtgtagcg cgcggctctg tctctgtcaa gacgcgagcg
     2761 agcgcgcgtg aagaagtact cggcgatttt ttcacgcgcg aacagtgtcg tacggagcgc
     2821 gaacgttacg accctgtacg acgcgatcgc cgtcgcgccg gtcgcacggc gcggtcccgc
     2881 ttgcgtgtcg ggcgtcgtcg catgaggtgc gttcggcggg tgcgctcagt ttcatgagct
     2941 ccgcaacgag cctcggggga cgttcaggtt gggtcatgcc gttgccctcg cccgctccgt
     3001 gccccgtgtc tgcccgacgg aaccaggcga cggcgcgcgg cgcgaaggca aaaacgctga
     3061 agatccattg gctattcggc ttccaactgc tcgtggcctg caccggcagc atcaccgaac
     3121 cggtcggctc ggacgcgaat agcggcggct cgaccagcag cagcatgggc ggcacgggcg
     3181 cagcgggtc
//
LOCUS       DATIML010000016         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1446500, whole genome shotgun sequence.
ACCESSION   DATIML010000016 DATIML010000000
VERSION     DATIML010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1446500"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VLJ38_00250"
     CDS             complement(<1..378)
                     /locus_tag="VLJ38_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37950.1"
                     /translation="MKAYKFLAAGAVGPFSGFVWPQPAAGAKAWVEVEGPLATCERGV
                     HVCRPEDLVHWIHEELWEVEFEGETQPGVDSLLARRARLVRRIDAWSEGGAKRFAVAC
                     GEHANALVGSDANDVVRGFLDDAE"
     gene            complement(386..643)
                     /locus_tag="VLJ38_00255"
     CDS             complement(386..643)
                     /locus_tag="VLJ38_00255"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSU37951.1"
                     /translation="MKLAPPPDLACRDVVELVSDYLEHALSADDQAHVEQHFLVCPPC
                     SAYLAQMKRSIELSSALRAGPGESSVVAPGLLQAFRDRNPR"
     gene            complement(640..1281)
                     /locus_tag="VLJ38_00260"
     CDS             complement(640..1281)
                     /locus_tag="VLJ38_00260"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU37952.1"
                     /translation="MARSEDDEVLAALRAGDERAFASLVATHQAAFRRLARVWVRDEA
                     AAEDVVQKTWLVVLDGLAGFEGRSALRTWLYGILLNVARSHARAERRNVSMSTLAADE
                     TATLEPAVDPARFQADGDRWAGHWLESPLPFPDPSAELEREELRRRLETAIFELPPAM
                     RQVLVLCDVEGLSGEEARNIAGISATHQRVLLHRARSKLRTLLERHFAEVRRS"
     gene            1451..>2408
                     /locus_tag="VLJ38_00265"
     CDS             1451..>2408
                     /locus_tag="VLJ38_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU37953.1"
                     /translation="MAEETEHARILQLLAAGTAAASGDEFFRSLAKNAALTLGARYAF
                     VAESVSALESRSLAYWEGSGFGEGFSYRFPGTPCQRVAQGHVCSTRTHLRELYPEDVW
                     LQQIGVDSYVGLPMMTADGRVLGHLAVLHTEPMEPSPEQLTVLQIFAARGCGELERVQ
                     TERALRAALRQVEELRDRLQAENRYLQEELAEQSEFEDMLGKSDSWRALLQQIASVAA
                     SDATVLIRGETGTGKELVARALHARSTRSARPLVKVNCGAISAGLVESELFGHTKGAF
                     TGALQKRVGRFELAHGGTIFLDEVGELPLDTQVKLLRVLQEGE"
BASE COUNT          429 a          819 c          788 g          372 t
ORIGIN      
        1 ctcggcgtcg tcgagaaacc cgcgcacgac gtcattcgcg tcggacccga cgagcgcatt
       61 ggcgtgttca ccgcaggcca cggcgaagcg cttggcccca ccctcgctcc acgcgtcgat
      121 gcggcgcacg agccgcgctc gccgcgcgag caggctgtca accccaggct gggtctcgcc
      181 ctcgaactcc acttcccaaa gttcctcgtg gatccagtgc acgagatctt ccggccggca
      241 cacgtgcacg ccgcgctcgc aggtcgcgag cggtccttcc acttcgaccc aagctttcgc
      301 gccggccgcc ggctgaggcc acacgaaccc cgaaaacgga ccgacggcac cggcagcaag
      361 gaatttgtac gccttcatgc gagcttcacc gcgggttgcg gtcgcgaaac gcctgcagca
      421 aaccgggcgc gaccacggaa gattcgcccg ggcccgctcg gagtgcggag ctgagctcga
      481 tgctccgctt catctgcgcg aggtaagcac tgcagggcgg gcagaccaag aaatgttgct
      541 cgacgtgcgc ctgatcgtcg gcgctgagcg cgtgttcgag gtagtcgctc acgagctcga
      601 cgacatctcg gcacgcgagg tcggggggcg gcgcaagctt catgatcggc gtacctcggc
      661 aaagtggcgc tcgagcagcg tccttagctt ggatcgagcg cgatggagca gcacgcgctg
      721 gtgagtggcg gagatgcctg caatgttacg cgcctcttcg ccggagagcc cttcgacgtc
      781 acagagcacg agcacttggc gcatggcggg aggcagctcg aaaatagcgg tttctaggcg
      841 ccgccgcagc tcttcccgtt cgagctccgc gctcggatcg ggaaacggca gcggtgattc
      901 gagccagtgc ccggcccagc gatcgccgtc tgcttgaaac cgtgcagggt cgaccgccgg
      961 ctcgagtgtg gcagtttcgt cagccgcgag cgttgacatc gaaacattcc ggcgttcggc
     1021 gcgcgcgtgc gaccgcgcga cgttgagcag gatgccgtac agccaggtgc gtagcgccga
     1081 acgcccctcg aacccggcaa gcccatcgag aaccacgagc caagtctttt gaacgacgtc
     1141 ttcggcggcg gcctcatctc gtacccaaac gcgcgcaagc cggcggaacg cggcctggtg
     1201 cgtcgcaacg aggctcgcga acgcgcgttc gtcgccggcg cggagcgcgg caagaacctc
     1261 gtcgtcttcg gaacgggcca tggccggcgc aggatacccg aatcatggcg gcttgcctgc
     1321 atatgcgcgc cgtcccatgt ccgcgacaaa gcgattcaca cgctcgcctc ggcgtcacag
     1381 tctggaaacg cgagcgcacg aacgggcttg acactgccgt tgcgaccgca ctcctatcgt
     1441 gactcgaggc atggcggagg agaccgaaca cgctcgcatt ctgcaattat tggccgcagg
     1501 gaccgccgcg gcgagcggcg atgaattttt tcgatccctc gccaagaacg cggcgctcac
     1561 gctgggcgcg cgctacgcgt tcgtcgcgga gtccgtgagc gcgctcgaat cgcgctcgct
     1621 cgcctactgg gaaggttcgg gcttcggtga aggcttcagc tatcgattcc ccggcacgcc
     1681 ctgccagcgc gtcgcccagg gccacgtctg ctcgacgcgc acgcacctga gagagctcta
     1741 ccccgaggac gtgtggctcc agcagatcgg agtcgacagc tacgtgggcc tgcccatgat
     1801 gacggccgat gggcgcgtgc tcggccatct cgcggtcctg cacaccgagc cgatggaacc
     1861 gtcgcccgag cagctcaccg tgctgcagat ttttgccgcg cgcggctgcg gcgagctcga
     1921 gcgcgtccaa accgaacgag cgctacgcgc ggccctccgc caagtggaag agctgcgtga
     1981 ccgactgcag gcggaaaatc gctacctgca ggaggagctc gccgagcaaa gcgagttcga
     2041 ggacatgctc ggcaagagcg acagctggcg cgcactcctg cagcagatcg catccgtcgc
     2101 cgcttccgac gcgacggtgc tcatccgggg cgagaccggc accggcaagg agctcgtcgc
     2161 ccgcgcactg catgcgcgga gcacgcgcag cgcgcgaccg ctcgtgaaag tcaattgcgg
     2221 cgcgatctcc gccgggctcg tcgagagcga gctcttcggg cacaccaagg gcgccttcac
     2281 gggcgcactc caaaagcgcg tcggccgctt cgagctcgct cacggcggca cgatcttcct
     2341 cgatgaagtc ggagagctac cactcgacac gcaagtgaag ctcctgcgcg tgctgcaaga
     2401 aggagaat
//
LOCUS       DATIML010000017         1793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3468225, whole genome shotgun sequence.
ACCESSION   DATIML010000017 DATIML010000000
VERSION     DATIML010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3468225"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="VLJ38_00270"
     CDS             <1..611
                     /locus_tag="VLJ38_00270"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HSU37954.1"
                     /translation="QVLLLTLLAMEAGLARGTLTHEASDELLAGLRALPAQVERVVAL
                     EPQIAEIAALWAASHDALYLGRGPLYPIALEGALKLKEISYIHAEGYPAGELKHGPIA
                     LIDARMPVVALMPKDEHRERTLSNLQETIAREGHVIAFVTKGDTALEGLADAVIELPQ
                     THPALAPILFAIPLQLLAYHMAVQRGCDVDRPRNLAKSVTVE"
     gene            complement(695..1249)
                     /gene="nikR"
                     /locus_tag="VLJ38_00275"
     CDS             complement(695..1249)
                     /gene="nikR"
                     /locus_tag="VLJ38_00275"
                     /inference="COORDINATES: protein motif:HMM:NF002815.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010045 - response to nickel cation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HSU37955.1"
                     /translation="MKDDLVRFGVAMEPSLLEGLDELAAARGCNRSEVLRDLARAELS
                     RSSVRERVPAFAAVTLVYNHHIRELSARLTELQHDLGEQVRSSMHVHLDHAHCLEVIV
                     MRGRADQLKDVADRMIGTRGVLQGGAEYVAESTLGSAGSHEHDRRGQAPSAGHEHLAR
                     HSHHAPPERARKAAKPPKRVRAGR"
     gene            complement(1304..>1793)
                     /locus_tag="VLJ38_00280"
     CDS             complement(1304..>1793)
                     /locus_tag="VLJ38_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU37956.1"
                     /translation="DVLLDDMFVPLSLVRSKKRSVLSERALAFDEACDDDREFGRKVR
                     TLAGNYQLVAKMPWLLVPGKNGVWFELVSHKLLRLVCPWALLFLFVGSAALGFDQTED
                     AHLALGWRTLWLAQVFCYALAVLGPRVGRAGVMARTFVVLNAAAVVGLWRFLRGSQAV
                     TW"
BASE COUNT          315 a          630 c          586 g          262 t
ORIGIN      
        1 cgcaagtgct cctgctcacg ctgctggcga tggaagcagg actcgcgcgt ggaacgctca
       61 cgcacgaggc gagcgacgag ctactcgcgg gcctgcgcgc cttgccggcg caagtggaac
      121 gcgtcgtcgc gctcgaaccg caaatcgccg aaattgcggc actctgggcc gcctcgcacg
      181 acgcgctgta tctcggccgc ggcccgcttt acccgattgc gctcgaaggc gcgctcaagc
      241 tcaaggaaat ctcgtacatc cacgccgagg gctatccggc cggggagctc aaacacggtc
      301 caatcgcgct catcgacgcg cgcatgcccg tcgtcgcgct gatgccgaag gacgaacacc
      361 gcgaacggac gctcagcaac ctgcaggaga cgatcgcgcg tgaaggtcac gtgattgcgt
      421 tcgtcaccaa gggcgacacc gcgctcgaag ggctggccga tgcagtgatc gagctgccgc
      481 agacgcatcc ggcgctcgcg cccattctct tcgcgattcc gctgcagctt ctcgcgtacc
      541 acatggccgt gcagcgcggc tgcgacgtcg accggccgcg caacctcgcg aagtcggtca
      601 ccgtcgagta acggcgcgac gcccacgtcg cggcgtcgct gtccggcgcg gcccgtcacg
      661 cctgctaccc agaacgaggc ggagctcgcg ccgctcagcg gccggcgcga acccgtttgg
      721 gcggcttggc tgctttgcgc gcgcgttccg gcggcgcatg gtggctatgg cgagccaggt
      781 gctcatggcc ggcggaaggc gcctggccgc gccggtcgtg ctcatgcgag ccggcgctac
      841 cgagcgtgct ttcggcgacg tactccgcgc cgccctgcag cacccctcgc gtcccgatca
      901 tgcggtcggc cacgtctttc agctgatcgg cccgcccccg catcacgatc acttccaagc
      961 aatgagcgtg gtcgaggtgc acgtgcatgc tcgaccgcac ctgttccccg agatcgtgtt
     1021 gtagctcggt gagccgcgct gacagctcgc gaatgtgatg attgtacacc aacgtcacgg
     1081 cggcgaacgc cgggacgcgc tcgcgcaccg acgagcggct gagttcggcg cgcgccaaat
     1141 cgcgcagcac ttccgaacga ttgcagccac gagccgccgc gagttcgtcg aggccttcga
     1201 gcaggctcgg ttccatggcg acgccgaagc ggacgaggtc gtccttcatg cggcgaatgt
     1261 agccccaaac gatgcagccg acgtagcccc caaacgcgcc gcgctaccaa gtcaccgctt
     1321 gcgagccgcg cagaaagcgc cagagaccca cgaccgcggc tgcattcaac accacgaagg
     1381 tgcgtgccat cacccctgct cggccgacgc gaggaccgag cacggcgagt gcgtagcaga
     1441 acacctgcgc gagccacagc gtgcgccagc cgagggccaa gtgcgcgtct tccgtctggt
     1501 cgaagccgag cgccgccgag ccgacgaaca ggaacaaaag cgcccacggg cagacgaggc
     1561 gcaggagctt gtgcgagacg agctcgaacc agacgccgtt cttgccgggt acgagtagcc
     1621 acggcatctt cgcgacgagt tggtagttgc cggcgagcgt gcgcaccttg cgaccgaact
     1681 cccggtcgtc gtcgcacgct tcatcgaacg cgagcgcgcg ctcggagagc acgctgcgct
     1741 tcttcgagcg cacgagcgag agcggcacga acatgtcgtc gagcaggacg tcc
//
LOCUS       DATIML010000018         2878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1736183, whole genome shotgun sequence.
ACCESSION   DATIML010000018 DATIML010000000
VERSION     DATIML010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736183"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VLJ38_00285"
     CDS             <1..427
                     /locus_tag="VLJ38_00285"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HSU37957.1"
                     /translation="HHAIRSDGDRLCYCGQRGCLELYASGPGVEGEYQRRSCKALSLA
                     EIAAARGADEHAEAAIQGMLEAYARGLANVIDILDPSAIVLGGGVSNLDLIYTEGRSR
                     VETYVCNGELQTPILRHELGDSAGVIGAALLDETGSSGA"
     gene            complement(448..933)
                     /locus_tag="VLJ38_00290"
     CDS             complement(448..933)
                     /locus_tag="VLJ38_00290"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSU37958.1"
                     /translation="MKIEDIMTRDVRACLADDSLATAAQIMWENDCGSVPVTDPDGRV
                     IGIITDRDLAMAAHLQGVALRASRVSSAMARDVKSCSPRDTPATVQALMQQHKIRRVP
                     VVDDQKRLLGIVSLGDLAYAMAAEQTLGGDGMTWTAIAHTLARVSEPRVPRWGRLGER
                     M"
     gene            1073..1891
                     /locus_tag="VLJ38_00295"
     CDS             1073..1891
                     /locus_tag="VLJ38_00295"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HSU37959.1"
                     /translation="MDFRAYAEQPDDELDLLEGALLIASDARPGLDPHAVASELDALA
                     EPLKRRKLAALPAPAQARVLADHLFVGVGFHGNDSDYYDPRNSFLDEVIARRTGIPIS
                     LSVLYVEVARRAGVMASPVGFPGHFLARIDDAERRLVVDPFHGGSALDEVALADLLRR
                     SGSKLRYSSELIAPTPVRQVVARMLMNLRGIYASRGDHRRLLLVIDRMIDLMPGSTDE
                     LRERGLLLARLGAPAAAAEDLARYVSAFPHADDATEVRRFIEQLGARVATLGQN"
     gene            complement(1914..2246)
                     /locus_tag="VLJ38_00300"
     CDS             complement(1914..2246)
                     /locus_tag="VLJ38_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37960.1"
                     /translation="MTERSGPARALVIAVCLGVTALGLANTYGDNAGVVALAERTACG
                     AGNCAYEKLREERSPLSQSFTFQVRLTEKGRERAATADVECRRAYLLAGEYACRLTSG
                     GVPVAPAP"
     gene            complement(2246..2839)
                     /locus_tag="VLJ38_00305"
     CDS             complement(2246..2839)
                     /locus_tag="VLJ38_00305"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU37961.1"
                     /translation="MDRFRRFDEAYYHRFYDSPQTRVISVEEHANLAEFVFAFARYNK
                     VEVKSVLDVGAGTGLWKYWIEKHQKGVQYTGTEVSQVMCKKHGYLHRDIARWRDRKKH
                     DLIVCQGVLQYLPDPDVAPAVANIAAMSRGLVYVEVTTRQDLRERCDTTRTDTDIFVR
                     NGSYYRGILTKHLVSVGAGLWWVKDRPPPFFELEMAG"
BASE COUNT          455 a          975 c          962 g          486 t
ORIGIN      
        1 ccaccacgcg atccgctcgg acggagatcg cctgtgctac tgcgggcagc gcggctgcct
       61 ggagctctac gcgagcggcc ccggcgtgga gggcgagtac cagcggcgga gctgcaaagc
      121 cctctccctc gcggagatcg ccgcggcgcg aggcgcggac gagcacgccg aggcggcgat
      181 ccaggggatg ctggaggcct acgcccgggg gctcgccaac gtgatcgaca tcctcgatcc
      241 gagcgcgatc gtcctcggcg gcggcgtctc gaacctcgac ttgatttaca cggaaggtcg
      301 ctcgcgcgtc gaaacctacg tctgtaacgg cgagctccaa acgccgatcc tccggcacga
      361 gctcggcgac tccgcgggcg tcatcggcgc cgccctgctc gacgagaccg gcagctccgg
      421 cgcctgacgt ttccgagcgc aggcgcgcta catccgctcg ccgagccggc cccagcgcgg
      481 gacgcgcggc tcactcacgc gcgcgagtgt gtgagcgatg gcggtccacg tcatgccgtc
      541 accgccgagc gtctgttcgg cagccatggc gtaggcgaga tcgccgagac tcacgatacc
      601 gagcagacgc ttctggtcgt cgaccacggg cacgcggcgg atcttgtgct gctgcatgag
      661 cgcttggacc gtcgccggcg tgtcgcgcgg cgagcagctc ttcacgtcac gggccatcgc
      721 gctcgacacg cgtgaagctc tgagcgcgac gccctggagg tgggcagcca tcgcaagatc
      781 acgatcggtg atgatgccga tcacgcggcc gtcggggtcc gtgacgggca ccgaaccgca
      841 gtcgttctcc cacatgatct gcgcggccgt cgccaagctg tcgtccgcga gacacgcacg
      901 aacgtcgcgc gtcatgatgt cctcgatctt cacgagtggt ctccttacct agagccggca
      961 gagcctagca tcccggtcac gcgaaaccct agggcattac cgcgctttcc gaaaggcggt
     1021 gccgcaattc cgagcggccg acgcggcgct cgagtccgct atactccgag gcgtggactt
     1081 tcgcgcgtac gccgaacaac cggacgacga gctagatttg ctcgagggcg cgctgctcat
     1141 cgcgagcgac gcgcgccccg ggctcgatcc gcacgcggtc gcgagcgagc tcgacgcgct
     1201 cgctgaaccg ttgaaacgca ggaaactagc ggcgttgccc gcgccggcgc aagcgcgcgt
     1261 gctcgcggat catctgttcg tgggcgttgg attccacgga aacgactccg actactatga
     1321 tccccgcaat tcgtttctgg acgaggtcat cgcgcgccgt acgggaattc cgatttcact
     1381 gtcggtgctg tacgtggagg tggcccgtcg tgcgggtgtc atggcgagcc cagtcggatt
     1441 cccggggcac tttctcgcgc gcatcgacga cgccgaacgg cgcttggtcg tcgatccgtt
     1501 ccacggcggg agcgcgctcg acgaggttgc gctcgccgat ctcttgcggc gctctgggtc
     1561 gaaacttcgc tatagctcgg agctgatcgc gcccacgccg gtgcggcagg tggtcgcgcg
     1621 catgctcatg aacctacgcg gcatctacgc gtcacgcggt gaccaccggc ggctcttgct
     1681 cgtcatcgat cgcatgatcg atctcatgcc gggctcgacc gacgagcttc gcgagcgggg
     1741 gctcctgctc gcccggctcg gggcgccggc tgccgccgcc gaggacctcg cgcggtacgt
     1801 ctcggcgttc ccacacgcgg acgacgcgac cgaggttcgg cgtttcatcg agcagctcgg
     1861 cgcccgcgtc gccacgctgg gacagaacta agcgaacccg ccggctcccg ccgtcagggt
     1921 gccggcgcca cggggacacc gccgctcgtg agccggcacg cgtattcgcc cgcgagcagg
     1981 taagcgcggc ggcattcgac gtccgccgtc gctgcgcgtt cgcgtccctt ttccgtgagc
     2041 cggacttgaa acgtgaagga ctgcgagagc ggcgagcgct cctcacgtaa tttctcgtag
     2101 gcgcagttgc cggcgccgca agccgtacgt tcggcgagcg caaccactcc ggcgttgtcg
     2161 ccgtacgtgt tcgcgaggcc gagcgccgtg acacccaagc aaacggcgat gaccagcgcg
     2221 cgcgcggggc cgctgcgctc ggtcatcagc cggccatctc gagctcgaag aagggcggcg
     2281 gacggtcctt cacccaccag agtccggcgc cgacgctgac caggtgcttg gtcaagatgc
     2341 cgcggtagta cgagccgtta cggacgaaga tgtccgtgtc cgtgcgcgtc gtgtcgcagc
     2401 gctcgcgcag atcttgccgc gtcgtcacct cgacgtagac gaggccgcgg gacatcgccg
     2461 cgatattcgc gacggctggg gccacgtccg gatccggcaa atattggagc acgccctgac
     2521 agacgatcag gtcgtgcttc ttgcggtcgc gccagcgcgc gatgtcgcga tgcaagtagc
     2581 cgtgcttctt gcacatgacc tggctcacct cggtcccggt gtactgcacg cctttttggt
     2641 gcttttcgat ccagtacttc cagagcccgg tgccggcgcc cacgtcgagg acgctcttga
     2701 cctcgacctt gttgtagcgg gcaaatgcaa agacgaactc cgcgagattc gcgtgctctt
     2761 ctacagagat gacgcgggtc tgcggcgaat cgtagaagcg gtgatagtag gcttcgtcga
     2821 accggcgaaa ccgatccatg gcgggggagt ctagtcgctc atgcctcgcg cgcgatag
//
LOCUS       DATIML010000019         1887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_292676, whole genome shotgun sequence.
ACCESSION   DATIML010000019 DATIML010000000
VERSION     DATIML010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292676"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..914
                     /locus_tag="VLJ38_00310"
     CDS             <1..914
                     /locus_tag="VLJ38_00310"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSU37962.1"
                     /translation="GALLARLAPNVADALAEGRVFVGGRRATDAALRLTPGVVVEVHA
                     GRAPSGRVTLLAEHSGLVFVNKPAGVATEPDHAGVAGSLVELVARELALPRGDLHAVS
                     RLDVGVSGVVTFARNAAGRELAAELRARGAFARRYVALAAGVPEPPEGTWDSALARRP
                     RASERSHDPRPAETRYATVARASRVVVTGPGRAQVELEPALLALSPVTGRTHQLRVHA
                     ARAKVPLFGDGAYGGAQRLVLPNGSVRALSRVFLHAAWVELELGSERLRVAAPAPDEL
                     LALWSDCGGAPDAWSRALEIALVSPRD"
     gene            924..1790
                     /locus_tag="VLJ38_00315"
     CDS             924..1790
                     /locus_tag="VLJ38_00315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37963.1"
                     /translation="MLLRFGLPLVLFSFACSKVPPILAPNQDTPHLTLPVPVAEGHGE
                     PVPAELPETAAGPSASAGARAVPPAPKQFSSDPPDPLPLRQAEQYEYTFHYEHGAIEL
                     VGVRPVRYPKPIVTARRMGRFAVELWIGHELIDRVRFDFPLLAADEPKTGPRPLGEKP
                     GMQGGSFTTTVLVPAATRARSARLVDRALRTQAELVWPPGPGGLGPTRPMAPPANVVN
                     DAPAVPVSAAAPNDDGSSPSAASPSAAAPSATSPSPASPSAQSRSSAAKSATPPSSAA
                     PPAASPARAHPR"
BASE COUNT          225 a          716 c          655 g          291 t
ORIGIN      
        1 tgggcgccct gctcgcgcgc ctcgctccga acgtggcgga cgctctcgcc gaaggtcgcg
       61 tgttcgtcgg cggacggcgc gcgacggacg cggcgctccg gctcacgccc ggcgtcgtcg
      121 tggaggtgca cgccggccgc gcgccgagcg gccgcgtgac gctgctcgcc gagcactcgg
      181 ggctcgtttt cgtcaacaag ccggccggcg ttgcgacgga gccggaccac gccggcgttg
      241 ccggcagtct cgtcgagctc gtcgcgcgag agctcgcgct gccgcgcggc gacctgcatg
      301 cggtgtcgag gctcgatgtc ggcgtgagcg gtgtcgtcac gttcgcacgc aacgcggcgg
      361 ggcgtgagct ggcggcggag ttgcgggccc gcggcgcgtt cgctcgccgc tacgtcgcgc
      421 tggcggcggg cgttccggag ccgccggagg gcacgtggga ctcggcgctt gctcggcgcc
      481 cgcgcgcgag cgagcgttct catgacccgc gtcccgcgga aacccgctat gcgacggtcg
      541 cccgcgcgag tcgcgtcgtc gtaacggggc ccgggcgagc acaggtcgag ctcgaacccg
      601 cgttgctcgc gctctcgccc gtgacgggcc gcacgcatca gctgcgcgtg cacgcggcac
      661 gcgccaaggt tccgttgttc ggcgacggcg cgtacggcgg cgctcagcgt ctggtgctcc
      721 cgaacggcag cgtgcgcgcg ctcagccgcg tcttcttgca cgccgcctgg gtcgagctcg
      781 agctcggcag cgagcggctc cgcgtcgcag cgcccgcgcc cgacgagcta ctcgcgcttt
      841 ggagcgactg cggcggcgca ccggacgcct ggtcgcgcgc cctcgaaatt gcgctcgtga
      901 gtccgcggga ctaacgagaa cgcgtgctct tgcgtttcgg cctacctcta gtcctcttct
      961 ccttcgcttg ctcgaaggtg ccgccgattt tggcgccgaa ccaggacacg ccgcacctca
     1021 ccttgccggt acccgtcgcc gaaggacacg gcgagcccgt gcccgccgag ctccccgaaa
     1081 cggccgccgg cccttcggcg tccgcgggcg cgcgcgccgt cccgcccgcg cccaaacagt
     1141 tctcgagcga tccgcccgat ccgctgccgc tccgccaagc cgaacaatac gaatacacgt
     1201 ttcactacga gcacggcgcg atcgagctcg tgggcgtgcg ccccgtgcgt tacccgaagc
     1261 cgatcgttac ggcgcgccgc atggggcgct tcgcggtcga gctctggatc ggccacgagc
     1321 tgatcgatcg cgtgcgcttc gacttcccgc tgctcgccgc cgatgaaccg aagacggggc
     1381 cacgcccgct cggcgagaag cccggcatgc aaggcggctc gttcacgacc acggtgctcg
     1441 tgcccgcggc gacccgcgcg cggagcgctc ggctcgtgga tcgcgcgctg cgcacgcaag
     1501 ccgagctcgt gtggccgccc gggcccggtg gtttgggccc cacgcggccc atggcgcctc
     1561 ctgccaacgt cgtgaatgac gcgcctgcgg tacccgtcag cgccgcggca ccgaacgacg
     1621 atggttcgtc gccgtccgcc gcctcgccgt ccgctgcggc gccgtccgct acgtcgccgt
     1681 cccctgcgtc accgtccgct cagtctcgat cgtcggcggc taaaagcgct actccgccgt
     1741 cgtccgccgc gccacccgcc gcttcccccg ctcgagcgca tcctcgatga gtcgagtgac
     1801 cagcgtgcgt gcgtcgacgc cgctcgcttg catcagcttc gggaacatcg agatcgacgt
     1861 gaagcccggc agcgtgttga tctcgtt
//
LOCUS       DATIML010000020         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_292968, whole genome shotgun sequence.
ACCESSION   DATIML010000020 DATIML010000000
VERSION     DATIML010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292968"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VLJ38_00320"
     CDS             <1..264
                     /locus_tag="VLJ38_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37964.1"
                     /translation="AEDKASGWSGVELGPFAAPTSAFEFIDVHDATSAAIQFAAAGAG
                     VRIRHAIFTDNALDIALPCGPAPTLADNRSSGPGKVKRRAPCP"
     gene            248..1972
                     /locus_tag="VLJ38_00325"
     CDS             248..1972
                     /locus_tag="VLJ38_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37965.1"
                     /translation="MRPAPERDSAADAGARRVVRATRRSPELWLLVGAYALLIARVYL
                     STLARGLWEDGYFAKRFAYNFWHHGSFSWNPADGPSYGMTSQVLELSAALLYRLAPEH
                     FVLTLKAALFAALPLTLGVLLHLTRPRDGAARARGIAGFPGALVCLAGLAEPLLPEIA
                     TSGLETPLALLGVALTLVLFRRFTGGHGGRALGIACLGLYLTRPDAILIPLVLLSGHA
                     LLSTLRPTPRVQPGFREALWVLAGVGLGLGVLLAGLRAYYGSALPLPFYVKVRGLSVQ
                     DADHLAIFAPEKLENLSRFAFCAAPLVFIALHARSREVGLWLSAAAVFTAYHALFTIE
                     TMGQLSRFYLPALVPLVAAAAQAYPAYLQRRRLPASALFAVACLVVFFGVLGRRGLEL
                     GLPREAYAPALVVLALLLVVPPRAVRAAFWPALLVLVAGAFRVYPVETLDFADDERIL
                     LDQIRRRMAFREIERVRERLHPRVLFHTDMGAPGVLFPEARVVDIDGLLNPAIALRHM
                     SVEELCRRERPDVFYVPNAAYPSLRAAILGGRCIQDYRRVVPLDRFTTLHVRSDLLPL
                     YGALDPEL"
BASE COUNT          239 a          746 c          694 g          386 t
ORIGIN      
        1 gcagaagaca aggccagcgg ctggtccggg gtcgagctcg gaccgttcgc cgcgcccacg
       61 agcgccttcg agttcatcga cgttcacgac gccacgtccg cggccatcca gttcgcggcg
      121 gcgggcgccg gcgtgcggat ccgtcacgcg atcttcacgg acaacgcgct cgacatcgca
      181 ctcccgtgcg gtcccgcgcc gaccctcgcc gacaatcgct cgagtggtcc cggcaaggtc
      241 aagcggcgtg cgccctgccc ctgagcgcga ctcggcggcg gacgccgggg ctcgtcgtgt
      301 cgtccgcgcg acgcgccgtt cacccgagct ttggctgctc gtgggagcgt acgcgctgct
      361 cattgcgcgg gtctacctct cgaccctcgc acgcggcctt tgggaagacg gctacttcgc
      421 caaacgcttc gcctacaact tctggcacca cggcagtttc agctggaatc ccgcggacgg
      481 gccgagctac ggcatgacct cgcaggtgct cgagctcagc gcggcgctgc tctaccgcct
      541 cgcgcccgag cacttcgtgc tcacgctgaa agcagcgttg ttcgccgcct tgccgctcac
      601 gctcggcgtg ctcttgcacc tcactcggcc gcgcgacggc gctgcgcgcg cgcgtgggat
      661 tgcaggcttt cccggcgcac tcgtgtgcct ggcgggtctc gcggagccgc tgctccccga
      721 aatcgctacg tccggcctcg aaacaccact cgcactgctc ggcgtcgcgc tgacactcgt
      781 tctcttccga cgtttcacgg gcggccacgg cgggcgcgcg ctcggcatcg cctgcctcgg
      841 gctgtacctc acgcgacccg acgcgatcct gatcccgctc gttctcttga gcgggcacgc
      901 gctgctctcg acgctgcgcc cgacgccacg agttcagccg ggctttcggg aggcgctctg
      961 ggtcttggcg ggcgtggggc tcgggctcgg cgttttgctc gccggcttgc gcgcttacta
     1021 cggcagtgcg ctgccgctgc ccttctacgt caaagtgcgg gggctgagtg tgcaggacgc
     1081 ggatcacctc gcgatcttcg cgcccgagaa gctcgagaat ttgagtcgct tcgcgttctg
     1141 cgccgcgccc ttggtgttca tcgcgctcca cgcccgctcg cgcgaggtcg gcctctggtt
     1201 gagcgccgcg gccgtgttca cggcctacca cgcgctcttc acgatcgaga cgatggggca
     1261 gctctcgcgc ttctacttgc cggcgctcgt gccgctcgtc gccgcggcag cgcaggcgta
     1321 tccggcgtac ttgcagcgcc gccgcctgcc cgcgagcgcg ctcttcgcgg tcgcgtgtct
     1381 cgtggtgttc tttggcgtgc tcgggcgacg cgggctcgag ctcggcctgc cgcgcgaggc
     1441 atacgcgccg gcgctcgtgg tgctcgcgct gttgctagtc gtaccgccgc gcgccgtgcg
     1501 cgccgcgttt tggccggcgc tgctcgtgct ggtcgcgggt gctttccgcg tctatcccgt
     1561 ggaaacgctc gatttcgcag acgacgagcg catcttgctc gatcagatcc gccggcgcat
     1621 ggcctttcgc gagatcgaac gcgtgcgcga gcggttgcac ccgcgcgtgc tgttccacac
     1681 cgacatgggt gcgccgggcg tcttgttccc ggaggcgcgc gtcgtggaca tcgatgggct
     1741 gttgaacccg gcgatcgcgc tccgccacat gagcgtggag gagctttgcc ggcgcgagcg
     1801 cccggacgtg ttctacgttc cgaacgcagc gtatccgagc ctgcgcgcgg cgatcctcgg
     1861 cggccgttgc atccaagact atcggcgcgt cgttccgctc gatcgtttca cgacgctgca
     1921 cgtgcggagc gatttactcc cgctttacgg cgccctcgac cccgagctct gagcagcggc
     1981 accgccgggc cagtcttcgg gtgcttcgtg gtcgcagacc gtgtgcgtcg ccgcgcgggc
     2041 gaaacggccg ggacgaggcc gaggc
//
LOCUS       DATIML010000021         3211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2314167, whole genome shotgun sequence.
ACCESSION   DATIML010000021 DATIML010000000
VERSION     DATIML010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3211
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2314167"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..1922
                     /locus_tag="VLJ38_00330"
     CDS             108..1922
                     /locus_tag="VLJ38_00330"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU37966.1"
                     /translation="MSGSFGATVSALSHLLKRLRLSTGPFIGSVALLLAAGALEGVPV
                     ALLVPLFDSLTNSEIKTPPLFPALSHALGGMTANQRVAALGAAIVFVVLLKNVLMVSG
                     YAWLGVQRSNLVVELRRQLLDRVLGAPPVILERNTSGAITDVFVAEAYRVVRIFEAGG
                     VVILRGTMALSYVLALLLLSWRFLALTLVLGFVLALTAMRLGRRILTFGRNLSRASTE
                     LARMVTEVVGGARVIRTTASAETHAKAFSEPNRAHAAADLGSNLALTIQGGVMETLGI
                     VGAITLTVIARVFWLGTGALDTAHFLAFCFGLVRLLPALNVVYATLGLLVATIGSLEH
                     VNEWLNLPRYPSRPFGTRVVPPLGDGIRFESVTLEYPDGHAPFRNLSFALPKGSTLAV
                     LGPSGSGKSTLASVLLRLREPTTGRVRFDGIDHWEFEARDFHRAVGFVEQDPFMFNAS
                     ILENVISGRPGITRSKVEEVIRIVQLGELIARLPQGLDTVLAERGSTLSGGQRQRLAI
                     ARAIAQDPDLLVLDEPTSALDADTEEEVVKAIYRASIGRTTVIITHRATTVRHATHCL
                     DLATGKLQPVVGEQEPPPRASVGGSGATLGEVDRAPRS"
     gene            2123..>3211
                     /locus_tag="VLJ38_00335"
     CDS             2123..>3211
                     /locus_tag="VLJ38_00335"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HSU37967.1"
                     /translation="MLGSALAFGAQHTPVLVVCALASAVSALLLAPARLPRAAWLLSG
                     LAAYTMLQVVPLPLALVERLSPAAGAVWRGALAPLHASVRWATLSVDPAATSLEALKW
                     SAYVSVLVAASGWRARRRAAMPAALVFGSAMIVCVITLVHGLLGLKRVYGLFNPSEDW
                     PWIRGPFVNGNNLAGYLNLGIFAGAGVWFSGRGGRLARPLAVGIPVLATGVLISGSRA
                     AAVSIVVAAALFATLILRQRPGGARALGVTLGGTALVALGLAAAGAGTRAWEVVNNTN
                     LGAKAQVWRWSLALVRDFPWFGVGRGAFETAFLPYRQSDQQNYTVVYAYAENFAVQWI
                     TDWGVPVGVAALAACAVLGTRTLGRARRN"
BASE COUNT          438 a         1129 c         1079 g          565 t
ORIGIN      
        1 gcctgcggcg agccgacacc gagcgcggac cataggcaac tagagctcct tccgcaagct
       61 gccgcgagtt gcctcggatc gcagccgagg ctaaaggtgc tcggcaaatg tcgggcagct
      121 tcggagccac ggtgagcgcg ctttcgcacc tgctcaagcg cctgcgactg tccacgggtc
      181 cgttcatcgg cagcgtggcg cttttactcg ccgcaggtgc gctcgaaggc gtgcccgtcg
      241 cgctactcgt gccgctgttc gattcgctca cgaactccga gatcaagacg cccccgctgt
      301 tcccggcgct gagccacgcg ctcggcggca tgacggccaa ccagcgcgtc gcggcgctcg
      361 gcgccgccat cgtcttcgtc gtcctgctca agaacgtctt gatggtgtcg gggtacgcct
      421 ggctcggcgt ccagcgctcg aacctcgtcg tcgaactccg gcggcagctg ctcgaccgcg
      481 tgctcggcgc gccgccggtc atcctggaac gcaatacgag cggcgccatc accgatgtct
      541 tcgttgctga agcctatcgc gtcgttcgaa ttttcgaggc gggcggcgtc gtcatcctgc
      601 gcggcacgat ggcgctcagc tacgtgctgg cgctgctgct gctgtcctgg cgctttctgg
      661 cgctgacgct cgtgctcggg ttcgtgctcg ccctcaccgc catgcgcctc ggccggcgca
      721 tcctgacttt cggtcgaaac ctctcgcgcg cgagcaccga gctcgcccgc atggtgacgg
      781 aggtcgtcgg cggcgctcgc gtcatccgca cgacggcgag cgcggagacg catgccaagg
      841 cattctccga accgaatcgt gcgcacgctg cggctgattt ggggtcgaat ctggcgctca
      901 cgatccaggg cggcgtgatg gagacgctcg gcatcgtcgg cgccatcaca ctcacggtga
      961 tcgcgcgcgt gttttggctc ggcaccggcg cgctcgacac ggcgcatttt ttggcgttct
     1021 gtttcgggct cgtgcggctg ctgccggcgc tcaacgtcgt ctacgcaacg ctcgggctct
     1081 tggtcgcgac catcggcagt ctcgagcacg tcaacgagtg gctcaacctg ccgcgctatc
     1141 cgagtcggcc attcggtacc cgcgtcgtgc cgccgctcgg cgacggcatt cgcttcgaaa
     1201 gcgtcacgct cgaatacccc gacgggcacg cgccatttcg caacctgtcg ttcgctctcc
     1261 ccaagggcag cacgctcgcc gtgctcgggc catcgggctc cggcaaatcg acgctcgcga
     1321 gcgtgctctt gcgactccgt gaacccacga ccggccgcgt ccgcttcgac ggcatcgatc
     1381 attgggagtt cgaagcgcgc gattttcacc gcgccgtcgg tttcgtcgaa caggatccgt
     1441 tcatgttcaa cgcgagcatt ctcgagaacg tgatctcggg ccgtcccggt atcacgcgca
     1501 gcaaggtcga ggaagtgatc cgcatcgtgc agctcggcga gctgatcgcg cgcttgccgc
     1561 agggactcga cacggtgctc gccgaacgcg gctccacgct ctccggcggg cagcggcagc
     1621 gcctcgccat cgcgcgcgcc atcgctcagg acccagacct cttggtgctc gacgagccga
     1681 cctccgcgct cgacgccgac acggaagaag aggtcgtcaa agccatctat cgggcgagca
     1741 tcggtcgaac cacggtgatc atcacgcacc gcgccacgac cgtacgtcac gcgacgcact
     1801 gcctcgattt ggccacgggc aagctccaac ccgtcgtcgg ggagcaagag ccgccaccgc
     1861 gtgcgtcggt gggcggctcg ggcgcgacgt tgggcgaagt cgatcgcgcg ccgaggtctt
     1921 gacgaaacgc agcgccttcg cggacactcc accgaaccac tggccaagaa cgcggcggcg
     1981 cgggggccac tccgaggaga tggaagcttc agtcgaggcc ggagcaacga acggaaccgt
     2041 cgcgcgccgg cggcgccggc gacgggctac ccggacattc gagccgcgtg aagtcatcgg
     2101 cgtcggactg ctaggcctga ccgtgctcgg ctcggccctc gcgttcgggg cgcagcacac
     2161 gcccgtcctc gtcgtttgcg cgctcgcgag cgcggtctcg gcgctcttgc tcgcgccggc
     2221 ccgcctgcct cgcgccgctt ggctgctttc cgggctcgct gcttacacga tgctccaggt
     2281 cgtgccgctc ccactcgctc tcgtcgagcg gctgtcgccc gccgcggggg ccgtgtggcg
     2341 cggtgcgctc gcgccgctgc acgcgtcggt gcgctgggcg acgctctccg tggatcccgc
     2401 cgcaacgtcg ctcgaagcgc tcaagtggtc ggcgtacgtg agcgtgctcg tcgccgcgag
     2461 cggctggcgc gcacgtcgtc gcgccgcgat gccggccgcg ctcgtgttcg gctcggcgat
     2521 gatcgtgtgc gtgatcacgc tcgttcacgg cctgctgggc ctgaaacggg tctacggcct
     2581 gttcaatccg agcgaggact ggccctggat tcgcgggccg ttcgtgaacg gaaacaacct
     2641 cgccggctac ctgaacctcg gcattttcgc cggcgcgggc gtgtggttct cgggacgcgg
     2701 cgggcggctc gcgcgccccc tcgccgtggg catccccgta ctcgcgacag gcgtgctcat
     2761 ctccggctcc cgcgcagcag ccgtgtcgat cgtcgtggcc gctgcgctgt tcgccacgtt
     2821 gattctgcgg cagcgcccgg gtggcgcacg cgcgctcggc gtcacgctcg gcgggacggc
     2881 gctcgtggcg ctcgggctcg ccgccgcagg agcgggcacg agggcgtggg aagtcgtgaa
     2941 caatacgaac ctcggggcca aggcgcaggt ttggcgctgg tcgctcgcgc tcgtgcgcga
     3001 tttcccgtgg ttcggcgtcg gacgcggtgc attcgaaact gcgtttctgc cgtaccggca
     3061 gtcggatcaa cagaactaca ccgtcgtcta cgcgtacgca gaaaacttcg ccgtgcagtg
     3121 gattaccgac tggggcgtgc cggtcggtgt cgcggccctg gccgcgtgcg cggtgctcgg
     3181 aacgcgcacc ctcggtcgcg cgcgacgcaa t
//
LOCUS       DATIML010000022         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3469219, whole genome shotgun sequence.
ACCESSION   DATIML010000022 DATIML010000000
VERSION     DATIML010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3469219"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1624)
                     /locus_tag="VLJ38_00340"
     CDS             complement(56..1624)
                     /locus_tag="VLJ38_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSU37968.1"
                     /translation="MSLRQDILSRGKKALFSPRLMRIVSDDRVMRAAEGLMDARSRVR
                     DAWKVLTNGYELPNIDPALDENVGERITARGTADEARAPRTNGHAVNGSNGNGAAAVE
                     GSSDMDESMKERNSLASIGGKDVFEKCRKFMAADNARKIGIYPFFRPLDLNDGPEAVI
                     DGRRVIMLGSNNYLGLTTHPKVRAAAKEAIDRFGTSMTGSRLVNGSMKMHEEFESKLA
                     AWMNKESALVFTTGYQVNLATCAALLSNKSSVAVIDRNVHASLYDGARLGQAAGARLV
                     RYKHNDAEALDTTLEKLGADDGAFVITDGVFSAEGEIAHLDQLVPIVKKHGARIFVDD
                     AHALGVIGPGGRGTPALFGLQDQVDLVGGTFSKSLASIGGWLVGERKVIDYIRHFAPS
                     FMFAAAAAPPSVAAAMAAFEVMQEESWRIDKLRENFTYMRDQLRGMGFELGHTQTAVI
                     PIFIRQDLRTIRMWRELLDEHGVYTNPFISPGVPPKSAMLRTSYMATHERHHLDRALE
                     AFRAVGKKYGVISG"
     gene            complement(1667..>1884)
                     /locus_tag="VLJ38_00345"
     CDS             complement(1667..>1884)
                     /locus_tag="VLJ38_00345"
                     /inference="COORDINATES: protein motif:HMM:NF013575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HSU37969.1"
                     /translation="EIFVEGSGFLHRMVRIIVGSLVDVGIGRLRGTALAAALDDKKRT
                     SLGRTAPPDGLCLDSMLLADEGVDAWP"
BASE COUNT          293 a          616 c          642 g          333 t
ORIGIN      
        1 gccgcgccgg aggtaacccc gctcggccgg tcgcgtcaac tcggacgccg gcacgtcagc
       61 cggaaatcac gccgtacttc ttgccgacgg cgcggaaggc ttcgagggcg cgatcgaggt
      121 ggtgccgctc gtgcgtcgcc atgtagctcg tgcgcagcat cgcgctcttc ggcggcacgc
      181 cgggcgagat gaaggggttc gtgtagacgc cgtgctcgtc gaggagctcg cgccacatgc
      241 ggatcgtgcg caggtcctgg cggatgaaga tcgggatgac ggccgtttgg gtgtgaccga
      301 gctcgaagcc catgccgcgc agctggtcac gcatgtaggt gaagttttcg cgcagcttgt
      361 cgatgcgcca gctctcctcc tgcatcacct cgaacgccgc catggccgcc gcgacgctcg
      421 gtggagccgc tgcggccgcg aacatgaagg agggtgcgaa gtgacggatg tagtcgatca
      481 ccttgcgctc gcccacgagc cagccaccga tgctggcgag cgacttcgag aacgtgccgc
      541 cgacgagatc gacttggtct tgcaagccga acagagcggg cgtgccgcgg ccacccgggc
      601 cgatcacgcc gagcgcgtga gcgtcgtcga cgaagatgcg cgcgccgtgc ttcttcacga
      661 tcggcacgag ctgatcgagg tgcgcgattt cgccctcggc gctgaacacg ccgtcggtga
      721 tgacgaaggc accgtcgtcg gcgccgagct tttcgagcgt cgtgtcgagc gcttcggcgt
      781 cgttgtgctt gtagcgcacg aggcgcgcgc ccgcggcctg gccgagccgc gcgccgtcgt
      841 agagcgaggc gtgcacgtta cggtcgatga ccgcgacgct cgacttgttg ctgaggaggg
      901 ccgcgcaggt ggcgaggttc acctggtagc ccgtcgtgaa gacgagcgcg ctctccttgt
      961 tcatccaggc ggcgagcttc gactcgaact cctcgtgcat cttcatcgag ccgttcacga
     1021 ggcgtgagcc ggtcatgctc gtgccgaagc gatcgatcgc ttccttggcg gcggcgcgca
     1081 ccttcggatg cgtcgtgagg ccgaggtagt tgttcgagcc gagcatgatc acgcgccggc
     1141 cgtcgatcac ggcctccggc ccgtcgttga ggtcgagcgg gcggaagaac gggtagatgc
     1201 cgatcttgcg cgcgttgtcg gccgccatga acttgcggca cttttcgaac acgtctttgc
     1261 cgccgatgct cgcgagcgag ttgcgctcct tcatcgactc gtccatgtcg gacgagccct
     1321 cgacggcggc ggcgccgttg ccgttcgagc cgttgacggc gtggccgttc gtgcgaggcg
     1381 cgcgcgcctc gtcggccgta ccgcgagcgg tgatgcgctc accgacattt tcgtcgagtg
     1441 ccggatcgat gttcggcagc tcgtacccgt tcgtgaggac cttccaggcg tcccgcacgc
     1501 gcgagcgcgc gtccatcaaa ccttccgccg cgcgcatcac gcgatcgtcg gagacgatgc
     1561 gcatgagccg aggactgaac aacgccttct taccgcgcga gagaatgtct tgtcgcaagc
     1621 tcacgattcg gccgggaact tacgcgagcg tctagagctc gtcaaatcac ggccaagcgt
     1681 ccacgccctc atcggcgagc agcatgctgt ccaaacacag gccgtcgggc ggcgccgtac
     1741 gcccgagcga ggtgcgcttc ttgtcgtcga gcgccgccgc gagcgccgtc ccgcggagcc
     1801 gtccgatgcc gacgtcgacc aacgatccta cgatgatgcg caccattcga tggaggaacc
     1861 cgctgccttc gacgaagatc tcgg
//
LOCUS       DATIML010000023         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1736896, whole genome shotgun sequence.
ACCESSION   DATIML010000023 DATIML010000000
VERSION     DATIML010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736896"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1089)
                     /gene="pqqE"
                     /locus_tag="VLJ38_00350"
     CDS             complement(<1..1089)
                     /gene="pqqE"
                     /locus_tag="VLJ38_00350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HSU37970.1"
                     /translation="MTTGTEPLVTPASRPYALVAELTYRCPLSCAYCSNPLELGDAST
                     ELDTATWGRVFREAAELGVLQVNLTGGEPLARSDLEALVAEARASELYVNLITSGIPA
                     DAARLERLKLSGLDSLQLSVQDTDAAGAAWIAGRDANDSKLRTAATARSLGLPLTLNV
                     VLHRGNIARVPAFVALAEELGATRLELANTQYLGWALENRDALLPSRAALEEARREAR
                     EAAARLRGRIEVLFVLPDYYTDLPRACMDGWARRYLVVTPSGLALPCHQASSITTLEW
                     QNVRDHALTAIWHESSAFRAFRGEDWLPDPCRSCERRSIDFGGCRCQAFALTGVAGAT
                     DPACVHAPRHDLVVAARARADVAAPPESE"
     gene            complement(1086..1370)
                     /gene="pqqD"
                     /locus_tag="VLJ38_00355"
     CDS             complement(1086..1370)
                     /gene="pqqD"
                     /locus_tag="VLJ38_00355"
                     /inference="COORDINATES: protein motif:HMM:TIGR03859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HSU37971.1"
                     /translation="MIDAQARVRLAARVRLRFDRHSGKHVLLYPERGLELNASGARIA
                     ELCVETRGVGELVELMAARASDTPRAVVERDVLGFLRALAARGLLEVTRS"
     gene            complement(1367..>2035)
                     /gene="pqqC"
                     /locus_tag="VLJ38_00360"
     CDS             complement(1367..>2035)
                     /gene="pqqC"
                     /locus_tag="VLJ38_00360"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HSU37972.1"
                     /translation="DQHPFHELMHTGGLSRAQLAAWTLNRFYYQTRIPIKDAIILSKT
                     EDAAFRRIWIERVRDHDGREENGKDGGLELWLRLAEAVGLERAEVASLRSVLPGVRFA
                     CDAYVTLCRESPLVVAVASSLTEMFAPDLMSKRIAAWEQYYPWVGAEALAYFRSRVPR
                     ARRDGEFGLAFVVAHATSRELQDACVAALVRKAEILWHLVDCVASATGGPTALSPVAP
                     SAPP"
BASE COUNT          320 a          714 c          725 g          276 t
ORIGIN      
        1 ttcggactcc ggcggagcgg cgacgtcggc gcgtgctcgc gccgcgacga cgaggtcgtg
       61 acgcggagcg tggacgcacg ccggatccgt cgcgcccgcc acgccggtca gcgcgaaggc
      121 ctggcagcgg caaccgccga aatcgatgct gcggcgctcg cagctgcggc acgggtcggg
      181 cagccagtct tcgccgcgga acgcgcgaaa agccgagctt tcatgccaaa tcgccgtcag
      241 cgcgtggtcc cgcacgtttt gccactcgag cgtcgtgatg ctgctcgctt ggtgacacgg
      301 cagcgccagg ccgctcggcg tgacgacgag gtagcgccgc gcccagccgt ccatgcacgc
      361 acgcggcaga tccgtgtagt agtcgggcag cacgaacaag acttcgatgc gcccgcgtag
      421 tcgcgccgcc gcctcgcgcg cctcgcggcg tgcctcttcg agcgcggcgc gggacggcaa
      481 cagcgcgtcg cggttctcga gcgcccagcc gaggtactgc gtgttcgcga gctcgagccg
      541 tgtcgcgccg agctcttcgg ccagcgcgac gaacgccggg acgcgcgcga tgttgccgcg
      601 atggagcacg acgttcagcg tgagcggcaa gccgagcgag cgcgcggtgg cggccgtgcg
      661 aagcttggag tcgttcgcgt cgcggcccgc gatccaagca gcgccggccg cgtccgtgtc
      721 ctgcaccgag agctgcaggc tgtcgagacc tgaaagcttc aagcgctcga gccgcgcggc
      781 gtcggcgggg ataccgctcg tgatgaggtt cacgtagagc tcgctcgcgc gagcttcggc
      841 cacgagcgct tcgagatccg agcgcgcgag cggttcgccc cccgtcaaat tcacttgcaa
      901 gacgccgagc tcggcggcct cgcggaagac gcggccccac gtcgccgtgt cgagctccgt
      961 gctcgcgtca ccgagctcga gcgggttcga gcagtaagcg cacgacagcg ggcagcgata
     1021 agtgagctcc gcgacgagcg cgtacgggcg cgacgcgggc gtgacgagcg gctccgtgcc
     1081 ggtcgtcacg agcgagtcac ctcgagcaac ccgcgcgcgg cgagggcgcg gaggaagccg
     1141 agcacgtcgc gttcgaccac ggcgcgcggc gtgtcgctcg cacgggccgc catgagctcg
     1201 acgagctcgc cgacgccgcg cgtttcgacg cacagctccg cgatgcgcgc gccgctcgcg
     1261 ttgagctcga gaccgcgctc gggatagagc aacacgtgct tgcccgagtg tcgatcgaag
     1321 cgaagccgaa cccgcgctgc gaggcgcacg cgagcttggg cgtcgatcat ggcggcgcgc
     1381 tcggcgcgac gggcgacaga gcggtcggac cgcccgtcgc gctcgcgacg caatcgacga
     1441 ggtgccacag gatctccgct tttcgcacga gcgcggcgac gcaggcgtcc tggagctcgc
     1501 gcgaggtcgc gtgcgcgacg acgaacgcga ggccgaactc tccgtcacgg cgcgcgcgcg
     1561 gcacgcggct ccgaaaatac gcgagcgcct cggcgccgac ccacgggtag tactgctccc
     1621 acgccgcgat gcgcttcgac atcaagtccg gcgcgaacat ctccgtgagc gacgaagcga
     1681 cggcgaccac gagcggactc tcgcggcaga gcgtcacgta agcatcgcac gcaaaacgca
     1741 cgcccgggag cacgctgcgc aggctcgcga cctccgcgcg ctcgaggccg acggcttcgg
     1801 cgagcctcag ccagagctcg agcccgccgt ccttgccgtt ttcctcgcgc ccgtcgtgat
     1861 cgcgcacgcg ctcgatccaa atccgccgaa acgcggcgtc ctccgtcttc gagaggatga
     1921 tcgcgtcttt gatcgggatc cgcgtctggt aataaaagcg attgagcgtc caagcggcga
     1981 gctgcgcgcg gctgagcccg cccgtgtgca tgagctcgtg aaacgggtgc tggtc
//
LOCUS       DATIML010000024         2513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4335805, whole genome shotgun sequence.
ACCESSION   DATIML010000024 DATIML010000000
VERSION     DATIML010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4335805"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1573
                     /locus_tag="VLJ38_00365"
     CDS             <1..1573
                     /locus_tag="VLJ38_00365"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU37973.1"
                     /translation="LTPGATHRYPLLHYLLLGLLSLPALLVAALAGPLTASGVRARVL
                     SVACMTAVSLVAKAVATLMGVLCVLLVARIVRRTLGVRAGRYAALFAATNMTFAFYAR
                     VSNLDVPYLTWTVLALDAVLDILESGDGRAYTRFGLFAAAAVATKDQAYASFLLVAPL
                     YFVVWPLARRSAFSRAHARLLARGAAFAISGYAVMSGALFNPTGFVRRLGELRGPSSQ
                     LWRGYSKDLAGLGANARDVVHAAAHDFWPSPVFSVAVLGVARARARRPGSSLLESRAA
                     RALPLAAGVGSLVFFTLAVARSEHRFLLPFGLFLSAYAGVAADTLVGATAALGAEAVG
                     RGVVTLGLVWCAVASSASHLTQLGDARNEVERYLERLPPGSLVETYGLLVYAPHFDVS
                     AQSPYRVARVGPDRPASRNPLVGATEIQAPIAEIEQRKPDVVVLSEGFAIPYLAVSDD
                     PTRPVAGALAARRADTPTTAFVHAALTDSLPHYRLALAARPHLPRWAYAFGLRAVPIQ
                     GTTGLSVWVLVREKP"
     gene            complement(1610..2005)
                     /locus_tag="VLJ38_00370"
     CDS             complement(1610..2005)
                     /locus_tag="VLJ38_00370"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSU37974.1"
                     /translation="MPKLSESSALAVLRIVTGVLVFPHGVRKLIQGPVAAIGHQMTAH
                     GFPASFAYVVTAGELAGIFLALGLYSRIAALAVAVTLWGVVIWVQLGLLPRVGTGAGV
                     SLEYPLLLAVVATLLAALPPTRWSLDRRR"
BASE COUNT          345 a          922 c          819 g          427 t
ORIGIN      
        1 tctgacgccc ggcgcgaccc accgctaccc gctccttcat tacctgctgc tcggcctgct
       61 ctcgctgccc gcgttgctcg tcgcggcgct cgcgggaccg ctcactgctt ccggggtgcg
      121 agcgcgcgtg ctctcggtcg cgtgcatgac ggccgtttcg ctcgtcgcca aggcggtcgc
      181 gacgctgatg ggcgtgctgt gcgtcctcct tgtcgcgcgc atcgtccgcc gcacgctcgg
      241 cgtgcgcgcc ggtcgctacg cggcgctgtt cgcggcgacg aacatgacgt tcgcgttcta
      301 cgcgcgcgtc tcgaacctcg acgtgcccta cctcacgtgg acggtgctcg cgctcgacgc
      361 cgtgctcgac atcctcgaga gcggcgacgg ccgcgcctac acccggttcg gcttgttcgc
      421 cgccgccgcg gtcgccacca aggaccaagc ctacgcgagc tttctcctcg tcgcgccgct
      481 ctatttcgtc gtctggccgc tcgcccgacg cagcgcattc tcgcgcgccc acgctcgcct
      541 gctcgcgcgc ggcgccgcct tcgccatcag cggctacgcc gtcatgagcg gcgcgctttt
      601 caatccgacc gggttcgtgc gccggctcgg cgagctccgc ggtccatcga gtcagctctg
      661 gcgcggctac tcgaaggacc tcgccggcct gggcgcgaat gcgcgcgacg tagtgcacgc
      721 tgcggcccac gatttttggc cttcgccggt gttttccgtc gccgtgctcg gcgtcgcgcg
      781 cgcgcgcgcg cgccgccccg ggtcgagtct gctcgagagc cgcgccgctc gcgccctgcc
      841 gctcgcggcc ggcgtcggca gtctcgtgtt cttcacactc gcggttgcgc gctccgagca
      901 ccgttttctc ctgccgttcg gcttgttcct gtcggcttac gccggcgtcg ctgcggacac
      961 gctcgtcggc gccacggcgg cgctcggcgc cgaagccgtt gggcgcggcg tggtgacgct
     1021 tggactcgtc tggtgcgccg ttgcgagctc ggcgagccac ttgacgcagc tcggcgacgc
     1081 gcgaaacgag gtggagcgct acctcgagcg cttgccgccg ggcagcttgg tcgagacgta
     1141 cgggctgctc gtgtacgcgc cgcatttcga cgtgtcggca cagtctcctt atcgcgtcgc
     1201 gcgcgtcggt cccgatcgcc ccgcgtcgcg caacccgctc gtcggcgcga cggaaatcca
     1261 ggcccccatc gccgagatcg agcaacgcaa acccgacgtc gtcgtgctgt cggaagggtt
     1321 tgcgattcct tacctcgccg tgagcgacga tccgacgcga ccggtcgcgg gcgcgctggc
     1381 cgcgcggcgc gcggatacgc cgacgaccgc gttcgtacac gccgcgctca ccgacagcct
     1441 gccccattac cgccttgcgc tcgccgcgcg gccacacttg ccacgctggg cttacgcttt
     1501 cggcctccgg gcggtgccga tccagggcac gaccggcctg tccgtctggg tgctcgtgcg
     1561 cgaaaaaccc taagccagcg ctttgaccgc cgatttggcg gcccgcagct cagcgccgcc
     1621 ggtcgagcga ccagcgcgtc ggcggaagcg cggcgagcag cgtcgctacg acggccagga
     1681 gcagcgggta ctcgagtgac acgcccgcgc cggtcccgac gcggggcaaa aggccgagtt
     1741 gcacccaaat caccaccccc cagagggtga cggccacggc gagcgctgcg atccgcgaat
     1801 acagcccgag cgcgaggaag atgcccgcga gctctcccgc cgtgacgacg tacgcgaagc
     1861 tcgccgggaa cccatgcgcc gtcatttgat gaccgatcgc ggcgaccggc ccctgaatca
     1921 gcttgcggac accgtgcgga aacaccaaaa cgccggtcac gatgcgcagg acggcgaggg
     1981 ccgacgattc agaaagcttg ggcatggccg agccggcacc accgtcccac tccctcacca
     2041 ccagtgcaac gttagtgtcg tgccagcgcc ggatccttca tcgccacgga cgatttttcg
     2101 tgcaatccat ggccggcgac acacgcgtgt cctcaccgtg acaccgcgat catgacgcgg
     2161 cgctcgcgcg cagcacctta gatcccggcg agagcacaaa aatccacatt ccgtgaagag
     2221 caagaaactg gcatgggctc tgcatacgta accagtgggt catgccaact tttctgaggc
     2281 tcttgctctg gaccgccgtg gtggttgcac ccggtggagt cctgcttgcg ccgatgctag
     2341 cggcggatga gatccgtcgc cggcgccgtg ctcaagaacc gtcctgaatt cgtacggggc
     2401 ttaggtcatt cacctgagcc cggccggccg agtaccggct tttcccgcgg ggggtccagc
     2461 cagccgtagg ccgctagaaa gcgccggaac tggcggtgct cgagcgtcag ggg
//
LOCUS       DATIML010000025         2171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5491251, whole genome shotgun sequence.
ACCESSION   DATIML010000025 DATIML010000000
VERSION     DATIML010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5491251"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..731
                     /locus_tag="VLJ38_00375"
     CDS             126..731
                     /locus_tag="VLJ38_00375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37975.1"
                     /translation="MAGSRLGLVTAALAFGCGHATPAASTSAAPTPQTGPLRYLPLED
                     GTVFSYDTQTSPSNDHGLLVLEVRRPRPDTAEFVVAGRVTRLSITPDAVAHAAGGFLL
                     RAPLVAGAEWHGDFGHVRLTRVAERVTVGAGTFADCLETVEELATREGDKRTTTTFCA
                     GVGIALRETEVEQGGEHQSERIALKSFGKRFDPSAASGPKD"
     gene            complement(769..1272)
                     /locus_tag="VLJ38_00380"
     CDS             complement(769..1272)
                     /locus_tag="VLJ38_00380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37976.1"
                     /translation="MPSRWVLLAISLLACGPDQGPLACPVGPDFVVLITAEYGPLPSD
                     LVLRLHYGGRAYDDPEELALAAPAPTRALFCYVADRNGTYPSEAVPLGGRTMGTAGAG
                     GEGGASFAPGASIDALSCQLWTDGSADLDVWSQMYGMTSVKLQTQKRLCKVKSSIELT
                     LDDAGMK"
     gene            1458..>2171
                     /locus_tag="VLJ38_00385"
     CDS             1458..>2171
                     /locus_tag="VLJ38_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37977.1"
                     /translation="MLLTLLSYLPALHGGFVWDDDSWTIRLGSLFHDSSGLGSIWLRP
                     TAMQQYYPLSGTTFWVDYQLWGFRPFPYHWENVLLHASSALLFWRVLRRLEVQGAWLA
                     SAVFALHPVMVESVAWIAERKNVLAMVLCLAAALAYLRYELAAEPAELRPVEVQTAGA
                     RSRPVRRQAAAFYVLAWLLFLAALLAKTFVCTFPAVILLLAWWRRGRLRWRHDVLPTL
                     PFFAVAIGMCALTAWLEKNH"
BASE COUNT          312 a          747 c          719 g          393 t
ORIGIN      
        1 tcggcgcgtg cgcgacgcgg cgcgcgagct ggcgcggcgc atcgagcccg atccgctgat
       61 caaagtcttg ttggcgctgt cggtcgcgct cttcgtcctg ctcgctttct gggcttacaa
      121 gacgcatggc gggtagccgg ctcgggctcg tcaccgcggc gctcgcgttc ggctgcggtc
      181 acgcgacgcc ggccgcctcg accagcgcgg cgcccacccc gcaaacgggt ccgctccgtt
      241 acctgccgct cgaggacggc accgtcttct cctacgacac gcagacctcg cccagcaacg
      301 accacggctt gctcgtgctc gaagtgcggc gcccgcgtcc cgatacggcc gagttcgtcg
      361 tcgccggccg cgtgacgcgc ttgtcgatca cgcccgacgc cgtggcgcac gcggcgggcg
      421 gctttctcct tcgcgcgccg ctcgtggccg gcgcggagtg gcacggcgac ttcggccacg
      481 tgcgcctgac gcgcgtggcc gagcgcgtga cggtcggcgc cggcacgttc gccgattgcc
      541 tcgaaaccgt cgaagagctc gcgacgcgcg aaggcgacaa gcgcacgacc acgacgtttt
      601 gcgccggcgt cggcatcgct ttacgcgaga cggaagtcga acagggcggc gagcaccaga
      661 gcgagcgcat cgcgctcaag agcttcggca agcgcttcga cccgagcgct gcgagcgggc
      721 cgaaagactg agcgaacact cgcgccgtag cgggtgcgac gcgaccgcct acttcatgcc
      781 ggcgtcgtcg agcgtgagct cgatgctcga cttcaccttg cacaggcgct tttgagtttg
      841 tagcttcacg ctggtcatcc cgtacatctg cgaccagacg tcgagatcgg ccgagccatc
      901 cgtccagagc tgacagctga gcgcgtcgat cgaagccccc ggcgcgaagc tcgcccctcc
      961 ctcgccaccc gcgccggccg tccccattgt gcggccgccg agcggcacgg cctcagacgg
     1021 gtacgtgccg ttgcgatcgg cgacgtaaca aaagagcgcg cgtgtcggcg ccggcgcggc
     1081 gagagcgagc tcttccggat cgtcgtaagc gcgtccgccg tagtgtaggc gcagcaccag
     1141 atcgcttggc agcggaccgt actcggcggt gatcagcacc acgaagtccg ggccgacggg
     1201 acacgcgagc ggcccctggt cggggccaca ggcgaggagg ctgatggcga ggagaaccca
     1261 gcggctcggc attgaggcgg cgattctagc gcgaggcgcg tcatttctcc ctggcgaagc
     1321 aacccttctg caaatccgaa ctcaccgaac gctcgctgca ctagaactag cgtcggattt
     1381 ctagaccgct gtcgatctgg ccgctgcgca agctcgttcg tgagcaatgg gtccccgtct
     1441 gtgcgggcgg ttcgctcgtg ctcctgaccc tcctgagcta cctgcccgct ctgcacgggg
     1501 gcttcgtgtg ggacgatgat tcctggacga tcaggcttgg cagcctgttc cacgacagct
     1561 ccggtctcgg gtcgatctgg cttcggccga ccgcgatgca gcagtactac ccgctctcgg
     1621 gcacgacgtt ttgggtcgat taccaactct ggggcttccg gccgttccct tatcattggg
     1681 aaaacgtcct gctccacgcc tcgagtgcgc tgctgttttg gcgggtattg agacggctcg
     1741 aggtccaagg cgcgtggctc gcgagtgcgg tctttgctct tcatccggtc atggtcgagt
     1801 cggtcgcctg gatcgccgaa cgcaagaacg tccttgccat ggtcctgtgc ctcgcggccg
     1861 ccctcgccta cttgcgctac gagctggcgg cggagcccgc agaactgcgc cccgtcgagg
     1921 tccagacggc gggcgctcgc tcgcgacccg tcaggcggca ggcggcggcc ttttatgtct
     1981 tggcgtggct cctgtttcta gcggcgcttc tggccaagac cttcgtttgc accttcccgg
     2041 cggtcatact gctgctcgcc tggtggcggc gcggacgact ccgctggcgg cacgacgtgt
     2101 tgccgacact gccgttcttc gccgttgcta tcggcatgtg tgccctgact gcatggctcg
     2161 agaagaacca t
//
LOCUS       DATIML010000026         2868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3759244, whole genome shotgun sequence.
ACCESSION   DATIML010000026 DATIML010000000
VERSION     DATIML010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3759244"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1961
                     /locus_tag="VLJ38_00390"
     CDS             <1..1961
                     /locus_tag="VLJ38_00390"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HSU37978.1"
                     /translation="IALAAMWSARRLHEIAVTISDEARAKHHEFLRQDDHGYYKGLTY
                     WSPNLNIFRDPRWGRGHETYGECPYLTARLGVAFVRGLQGDDPRYLKLVATPKHFAVH
                     SGPEALRHRFDAVVSPKDLRETYLPAFHACVTEAKAESIMGAYNRTNGEPCCASQALL
                     VEILRGEWGFCGYVVSDCWALRDLHEHHHVTKTWEESAAVAVKAGCDLNCGCTYEHLP
                     AAVAQNLVSEAELDRSLERLFSARFRLGMFDPPERVPYAQIPYEVNDCETHAELALVA
                     ARESLVLLKNERELLPLARDTKSIAVIGPNADDPKMLVGNYHGTPSRSVTPLAGIRAA
                     VARETKVWYAEGCNRSGVESDVPNRTALLSEAKSMAERADVVVLCLGLDAEIEGEEGD
                     ARSSDASGDKLSLALPGLQEQLFETVWATGKPIVVVLLSGSPLAVGFADERAGALLQA
                     FYPGQAGGTALADVLFGNYSPAGRLPVTFPRSLADVPAFESYAMRGRTYRYLEKEPLY
                     PFGFGLSYTRFAYSELALSRTRLTAESDDVEVSVHVTNTGSRASDEVVELYVKALDAS
                     ASQPNHELCGFERITLAAGESRRVSFTLSARDLSLIDDDGHRVLEPGRFRVTVGGSQP
                     DARSIALLGAEPLGAELELAGIRREIAY"
     gene            complement(2100..2642)
                     /locus_tag="VLJ38_00395"
     CDS             complement(2100..2642)
                     /locus_tag="VLJ38_00395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37979.1"
                     /translation="MNDAPCGNPAPSKSAQNDAPAGQPPLGAPALPPAPVVAPPFALP
                     APPPELAPAKLAPPKPGCPPFAVPALAPLPPDDGAVPPLPAFPAELGEPAAGPAPPGA
                     VPPFPAEETLPPVPATLTLPPLPPPGALAGVPPLGAPPLPGEEVPPVPEWSGSCAAVP
                     PPQASAAAAMKGERRSNSRG"
     gene            2641..>2868
                     /locus_tag="VLJ38_00400"
     CDS             2641..>2868
                     /locus_tag="VLJ38_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37980.1"
                     /translation="MPAYQASMWSDMLSIDASTSHGGAHSLLVKPTGSDGYSYRVLAV
                     TAPAPSFWVRLWVKSDVDLGQADHNAFFGAST"
BASE COUNT          447 a          965 c          986 g          470 t
ORIGIN      
        1 cgattgcgct cgcggcgatg tggagcgcgc ggaggctcca cgagatcgcc gtcacgatca
       61 gtgacgaagc gcgcgcgaag catcacgagt tcctgcgcca ggacgaccac ggctattaca
      121 agggactcac gtactggagt cccaatctca acatcttccg cgatccgcgc tgggggcgcg
      181 ggcacgagac ttacggtgag tgtccgtacc tgaccgcgcg actcggcgtc gccttcgtgc
      241 gcggcttaca aggcgacgat ccgcgctacc tgaagctcgt cgccacgccc aagcacttcg
      301 cggtgcacag cggaccggag gcgctgcgtc atcgcttcga cgccgtcgtg agcccgaagg
      361 acttgcgcga gacgtacctg cccgcgtttc acgcgtgcgt cacggaagcg aaagccgaga
      421 gcatcatggg cgcctacaac cgcacgaacg gcgagccctg ctgcgcgagc caggcgctgc
      481 tcgtcgaaat cttgcgcggc gaatgggggt tttgcggcta cgtcgtgagc gactgctggg
      541 cgctccgtga tttgcacgag catcatcacg tgaccaagac ctgggaggag tccgcggccg
      601 tcgccgtgaa ggcgggttgc gatctcaatt gcggctgcac ctacgagcac ctccccgcag
      661 ccgtcgcgca aaacctcgtc agcgaagccg agctcgatcg ctcgctcgag cggctcttca
      721 gcgcgcgttt tcggctcggc atgttcgacc cacccgagcg cgtgccgtac gcgcaaatcc
      781 cgtacgaggt gaacgactgc gagacccacg ccgagctcgc gctcgtggcg gcgcgcgagt
      841 cgctcgtgct gctcaagaac gagcgcgagc tcctgccgct cgcgcgtgac acgaagagca
      901 tcgccgtgat cggtccgaac gccgacgatc cgaaaatgct cgtcggcaat taccacggca
      961 cgccgtcgcg ttccgtcacg ccgctcgcgg gcattcgcgc cgccgtcgca cgcgaaacca
     1021 aggtttggta cgccgagggc tgcaatagga gcggcgtgga gagtgacgtg ccgaaccgca
     1081 cggcgctttt gtcggaagcc aagagcatgg cggaacgggc ggacgtcgtc gtgctctgcc
     1141 tcgggctcga cgccgaaatc gagggtgaag agggcgacgc ccgaagctcc gatgcttcgg
     1201 gcgacaagct gagcctcgcc ttgcccggct tacaggagca gctcttcgag accgtctggg
     1261 cgacgggcaa gccgatcgtc gtcgtgctct tgagcggcag cccgctcgcc gtcggcttcg
     1321 cggacgaacg cgcgggggcc ctgctccaag cgttctatcc gggccaagcc ggcggtaccg
     1381 cactcgccga cgtcctgttc ggcaactaca gcccggcggg gcgcttgccc gtcaccttcc
     1441 cgcgctcgct cgccgacgtg ccggcgttcg agagctacgc catgcgcggc cgcacctatc
     1501 gctacctcga aaaagagccg ctctatccct tcggtttcgg cttgtcctac acgcgcttcg
     1561 cgtactcgga gctcgctctc tcgcgcacgc ggctcacggc ggagagcgat gacgtggaag
     1621 tctccgttca cgtcaccaac acgggctcac gcgcgagcga cgaggtcgtc gagctctacg
     1681 tgaaggctct cgacgcgtcc gcgagccagc cgaaccacga gctctgcggc ttcgagcgca
     1741 tcacgctcgc ggcgggcgaa tcgcggcggg tgagcttcac gctctcggcg cgcgatctgt
     1801 cgctgatcga cgacgacggg caccgcgttc tcgaaccggg acgcttccgc gtgacggtgg
     1861 gcggttccca gcctgacgcg cggagcattg cactgctcgg cgcggagcca ctcggcgcgg
     1921 agctcgagct tgcgggaata cgccgcgaaa tcgcgtattg agcgcgccga ccggctcatc
     1981 cgctttcgtt cacactgttc gtttgcgaga agagccgatc gcgctgcgcg gaacgtcctc
     2041 atttttggcg tgcctgcctc gcgtgatccg aaagcttccg ctacgcttag cttcttggtt
     2101 cacccgcgag agttgcttcg tctttcccct ttcatcgcag cggccgcgct cgcctgtggc
     2161 ggcggtacgg ctgcgcatga ccctgaccac tccggaaccg gtggaacttc ttcccccggc
     2221 agcggtggag cgccgagcgg cggaacgccc gcgagcgcac cgggcggagg cagcggaggc
     2281 agcgtgagtg tggcgggtac gggcggcagc gtctcttcgg cggggaaggg tggaaccgct
     2341 cccggtggcg ctggtcccgc ggcaggctcg cccaattcgg cgggaaatgc ggggagcggc
     2401 ggtactgcgc cgtcatcagg cggcagcggc gccagcgccg gtacggcgaa cggcgggcaa
     2461 ccgggctttg gcggcgcgag cttcgccggc gcgagttccg gcggcggagc gggcagcgcg
     2521 aacggcggcg caacgacggg cgcaggcggg agcgctggag cgcccagcgg cggctgcccg
     2581 gcgggggcgt cgttctgcgc cgacttcgag ggcgcggggt tgccgcaggg cgcgtcgttc
     2641 atgcctgctt accaagcgag catgtggtcg gacatgctgt cgatcgacgc gtcgacctcg
     2701 cacggcggcg cgcactcgtt gctggtgaag ccgaccggca gcgacggtta cagttaccgc
     2761 gtgctcgccg tcaccgcgcc cgcgccgagc ttctgggtgc gactctgggt gaagagcgac
     2821 gtcgatctcg gtcaagccga tcacaatgcg tttttcggcg cttctacc
//
LOCUS       DATIML010000027         1806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3470775, whole genome shotgun sequence.
ACCESSION   DATIML010000027 DATIML010000000
VERSION     DATIML010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3470775"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1005)
                     /locus_tag="VLJ38_00405"
     CDS             complement(<1..1005)
                     /locus_tag="VLJ38_00405"
                     /inference="COORDINATES: protein motif:HMM:NF021597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2330 domain-containing protein"
                     /protein_id="HSU37981.1"
                     /translation="MRFRRHSLGFSLLLASLTLASGASAFPGFMAGKTKPPIVHETQV
                     VMMKKGPTTVLTVMPDYQGPLEPFVVVLAAPADVTADHVVTLKREFVDHANQMSAPRF
                     HEFWEQDPCDPGPPEQEWQRDLRVSGSGFLGAPSPGGGERKVAPELSLDTQPKVKEGE
                     YKVSVLAAGASPVAWLKEHGYAVPPGAEQAVAPYVSQGLVFVMAEVDTKRIELVGSDR
                     AQLSPLRFYTDQPYDTLPLRLGLVNKPASDMQELTLYALDPANRYEVANYENITAPTN
                     VEVDFEVKERMGEFYNSLYDSILKQHPKAFLREYAWPADGCGEPCATVPYELSELLSL
                     G"
     gene            1084..>1806
                     /locus_tag="VLJ38_00410"
     CDS             1084..>1806
                     /locus_tag="VLJ38_00410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37982.1"
                     /translation="MLPSRVLADEPTQGTGWAPTTLRSVAVQDWFVFTYALILNLAVA
                     AAPAGPIHDRCAARVGALLALCVFTLVTVRGRLLPGTVLPALIYRFGVYGVVQISYFF
                     FRELLPLVNPRSLDRELHSLGMGLFGAEPALRLDAVVTPTTTEWFAFFYFGYFFVLAT
                     HVLPILFLGKDRRLLGEFTFGLLFMFGVGHTLYMLVPGYGPYRAIAPEFRHALPSGLW
                     YNVVMETVAEGGALKDIFPSLHT"
BASE COUNT          269 a          589 c          598 g          350 t
ORIGIN      
        1 gccgaggctc aggagctccg agagctcgta gggcacggtc gcgcacggct cgccgcagcc
       61 gtccgccggc cacgcatatt cacgcaggaa cgccttgggg tgctgcttga ggatcgagtc
      121 gtagagcgag ttgtaaaact cgcccatgcg ctctttcacc tcgaaatcga cctcgacgtt
      181 ggtgggcgcg gtgatgtttt cgtagttggc gacttcgtac cggttcgcgg ggtcgagggc
      241 gtagagcgtg agctcctgca tgtcgctcgc gggcttgttc acgaggccga gccgcaacgg
      301 cagcgtgtcg tacggttgat cggtgtaaaa gcgcagcggg gagagctgcg cgcgatcgga
      361 gccgacgagc tcgatgcgct tggtatcgac ctcggccatc acgaacacga gaccctggct
      421 cacgtaaggc gctaccgcct gttcggcgcc gggcggcacg gcgtaaccgt gctccttgag
      481 ccacgccacc ggcgacgcgc cggccgcgag tacgctcacc ttgtactcgc cttccttcac
      541 cttcggctgc gtgtcgagcg aaagctcggg cgcgactttg cgctcgccgc cgcccggcga
      601 cggcgcgccg agaaagccgc tgcccgacac gcgcaaatcg cgctgccact cctgctcggg
      661 cggcccggga tcacagggat cttgctccca aaactcgtga aagcgcggcg cgctcatctg
      721 gttggcgtga tcgacgaact cgcgcttgag cgtcaccacg tgatcggccg tcacgtccgc
      781 gggcgccgcg agcaccacga cgaacggttc gagcggcccc tgataatcgg gcatgaccgt
      841 gagtacggtc gtgggcccct tcttcatcat cacgacctgc gtttcgtgga cgatgggggg
      901 cttggttttg cccgccatga agccgggaaa tgccgacgcg ccggaggcga gcgtcagtga
      961 agcgaggagc agcgagaacc cgagggaatg gcgacgaaaa cgcacgacgg cgtgtactta
     1021 gcatcgaatg tccggcgctt ggcaagctcg ggcttcggcg aacctgtggt agggacgggc
     1081 gtcatgctgc cctcccgagt gctggcggac gagcccacgc agggcacggg gtgggcaccg
     1141 accacgctcc ggtccgtcgc cgttcaggac tggttcgtgt tcacttacgc tctgattttg
     1201 aacctcgccg tcgcggcggc gccggcaggc cccatccacg atcgctgcgc cgcgcgggtg
     1261 ggcgcgctac tcgcgctctg cgttttcacg ctcgttaccg tgcgggggcg gctcttgccg
     1321 ggcaccgtgt tgcccgcgct gatctatcgc ttcggggtct acggcgtcgt tcagatctcg
     1381 tactttttct ttcgcgagct gttgccgctc gtcaatccta ggagcctcga cagagagctc
     1441 cattcgctcg ggatggggct cttcggcgcg gagcccgcgc tgcggctgga cgccgtcgtc
     1501 acgccgacca cgaccgagtg gttcgctttc ttctacttcg gatatttctt cgttctcgca
     1561 acgcacgtgc tgccgatcct gttcctcggc aaggaccggc ggttgctcgg cgagttcacg
     1621 tttggcttgc tcttcatgtt cggcgtcggg cacacgcttt acatgctcgt gccgggctac
     1681 ggcccctacc gcgccatcgc gcccgagttc cggcacgcgc tgccgagcgg gctctggtac
     1741 aacgtcgtga tggagacggt cgccgagggc ggcgcgctca aggacatttt cccctcactt
     1801 catacg
//
LOCUS       DATIML010000028         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_583360, whole genome shotgun sequence.
ACCESSION   DATIML010000028 DATIML010000000
VERSION     DATIML010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_583360"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VLJ38_00415"
     CDS             <1..681
                     /locus_tag="VLJ38_00415"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSU37983.1"
                     /translation="DIPADVVQKVSRTLIEHGKVTRAYIGIVMQSLTPDLRSALGSNA
                     PEKGALVSEVQKGSPAERAGIHVGDIVVRVAGKPAEDSRAVQHAVLSENVGDKVPMTV
                     WRDGKQIELNVQTAELPGGQASQDDQPASGEGKLGLTLQTLTPDLSNRLGIDQASKGA
                     VITAVRPGSSAAKAGLRTGDVIVEVDRQQVASADDAAKRLGSRRAGGHLARILRGDGS
                     LFVVVPAG"
     gene            complement(722..1498)
                     /locus_tag="VLJ38_00420"
     CDS             complement(722..1498)
                     /locus_tag="VLJ38_00420"
                     /inference="COORDINATES: protein motif:HMM:NF016705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSU37984.1"
                     /translation="MSNNRVLYNAFSEIGTYASPVAALSAVGLGIGGLLGAGPRTLRR
                     HPLVAAALACAGTVALAKSQFDRFLTQKPPYELVDCVNGVEIRRYAPRVVAETIIGTT
                     SFGEAREEGFRRLAGYIFGDNVVAEPGQNPLGNALADALERAPHSEQLAMTAPVTLTA
                     SERGYVMHFLMPKDREFATLPQPKDPRVVLRRLPLANFAVLRFRGSYAAERIEAKERE
                     LVERMEAAGLQPKGELTFAGYDPPSALPFLRRVEVWVGLA"
BASE COUNT          290 a          585 c          597 g          274 t
ORIGIN      
        1 gacatccccg ccgacgtcgt ccagaaggtg tcccgcaccc tgatcgagca cggcaaggtg
       61 acgcgcgcct atatcggcat cgtgatgcaa tcgctcacgc cggacttgcg ctcggccctc
      121 ggcagcaacg cgcccgaaaa aggcgcgctc gtctccgagg ttcaaaaggg ttcgccggcc
      181 gaacgcgccg gtatccacgt tggagacatc gtggttcgcg ttgccggcaa gccggccgag
      241 gattcacgcg ccgttcagca cgccgtgctc tccgagaacg tgggcgacaa ggtgcccatg
      301 accgtgtggc gtgacggcaa gcaaatcgag ctcaacgtgc agaccgcgga gcttcctggc
      361 ggccaagcgt ctcaggacga ccaacccgcg agcggggagg gaaagctcgg cctcacgctc
      421 caaaccctca cgcccgattt gtccaaccgg ctcggcatcg atcaagcgag caagggcgcc
      481 gtgatcacgg cagttcgtcc gggcagctct gccgcgaagg ctgggctgcg caccggcgac
      541 gtcatcgtcg aagtcgatcg gcagcaggtc gcgagcgccg acgatgcagc aaagcggctc
      601 ggcagtcgtc gtgccggcgg gcatctggct cgcatcctgc gcggcgacgg ttcgctcttc
      661 gtcgtcgtgc ccgcggggtg aacacgccgt gacgccgcga tggactccct gcgtgggccc
      721 gtcatgccag gccgacccac acttcgaccc gccgcaggaa ggggagggcg gaaggcggat
      781 cgtaaccggc gaacgtcagc tcacccttcg gttgtaggcc cgctgcctcc atgcgctcga
      841 cgagttcgcg ctccttggct tcgatgcgct cggcggcgta gctgccgcgg aagcgcagca
      901 ccgcgaaatt tgccagcggc aagcggcgca acaccacgcg cggatccttc ggctgcggca
      961 gcgtcgcgaa ctcccggtct ttcggcatga gaaagtgcat cacgtagccg cgctccgagg
     1021 cggtgagcgt gaccggcgcc gtcatcgcaa gctgctcgct gtgcggcgca cgctcgagcg
     1081 cgtcggcgag cgcgttgccg agcgggttct gcccgggctc cgccacgaca ttgtcgccga
     1141 agatataccc ggcaagtcga cgaaagccct cttccctcgc ttcgccgaag gacgtcgtgc
     1201 cgatgatcgt ctcggcgacc acccgcgggg catagcgcct gatctcgact ccgttcacgc
     1261 agtcgacgag ctcgtacggg ggcttctgcg tgaggaagcg atcgaactgc gacttggcga
     1321 gcgcgactgt ccccgcacac gcgagcgcgg cggccacgag cggatggcgg cgcaaggtcc
     1381 gcggtcccgc gcccagcaag cccccaatgc ccaaacccac ggcggaaagc gccgccacgg
     1441 gcgacgcgta cgtgccgatc tctgaaaacg cattgtaaag cactcggtta ttggacatgc
     1501 ttttgaacaa gcaatggtcg tgcctatgcg gcgtcgctgg ccggtgggca gggccgtacc
     1561 gaattcgtcg atctcgcccg tgctaccctc cgcgtatggg tcgtgaggtg cgtggtggtg
     1621 tcgtttgggg atgtctcgtg ctcggtctcg gtctcggcgc gtgctcggcc gacgaacccg
     1681 ccggctcggg cggtgcggcg gggagcgcag ccgcgagtgg cggaagaaca ggcggatcgg
     1741 cgggcg
//
LOCUS       DATIML010000029         3868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1160818, whole genome shotgun sequence.
ACCESSION   DATIML010000029 DATIML010000000
VERSION     DATIML010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1160818"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..1698
                     /locus_tag="VLJ38_00425"
     CDS             130..1698
                     /locus_tag="VLJ38_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene dehydrogenase"
                     /protein_id="HSU37985.1"
                     /translation="MSSRFYDAVVLGRSLGSLTVATLLARRDFRVLLVGQGQRPTTYR
                     FDRRVLARRAFTLLFASSPVWRRIVHELAQSPQFRRRAVPQDPMFTVLAGRQRLELPP
                     DVELFAREIEREFPEVRQVVDELYTTIAGVNAAADTAFDRDGVWPPGKLWERFETGQA
                     ASLLPFGNGERAGELFTKFPSGHLYRDIAGVPALFAGHLAGTAEQLPALAFSRLHGAW
                     ARGIAALAGGEQEFEAYLTERLVAHGGVCSLERRAERLVVRHGSAVGVVLDGDDEMTG
                     TTAVITDQWGEALAELSGGEGVTRAAERDWPRLAPETGRFVTSALVRRKLLPENLAPE
                     SFVLPPGAPRDPRKPVVHLQWFDGKALAEGAPVPDGEALLVAETLLPARGPLTLLEAR
                     AAVVDTLRTALPFFDEHLVLLDSVHDGLPLLDASDGGRREIDRIHVEGAAAGAEPMQR
                     QWTVDPPGYRHLAGEPLRGPIPGTFLVGPSVLPALGQEGELLAAVSVARLVTRRDRTR
                     QRMRQKLWSKIETT"
     gene            1695..2288
                     /gene="rsmD"
                     /locus_tag="VLJ38_00430"
     CDS             1695..2288
                     /gene="rsmD"
                     /locus_tag="VLJ38_00430"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HSU37986.1"
                     /translation="MSAPRVIAGAFRGRSLKVPRGAVTRPTGARVREALFNVLGNITG
                     VKVLDLYAGSGALAFEALSRGAAHAVLVEHDRAALTCIRENAAALGVEARCAIVPLPL
                     PRALAQATQHAPFDLVFCDPPWADLRAAADTLEDLVRRCALGSGARLVLEHSARDDVP
                     RVSGLEPADRRVWGDTAVALLVPGDRGLSGEEGRTEP"
     gene            2409..3035
                     /locus_tag="VLJ38_00435"
     CDS             2409..3035
                     /locus_tag="VLJ38_00435"
                     /inference="COORDINATES: protein motif:HMM:NF033768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AgmX/PglI C-terminal domain-containing protein"
                     /protein_id="HSU37987.1"
                     /translation="MPPTNSPPSSLPPPPPKHGGGQFIVAVIVMLLLMGGLVFWKLHG
                     SDEKSGPAPSGLSTVAQEPTATVDQVVPPPPPPPSASAEDGGTPSTTKKPVASTNLGT
                     NCGSCGHCTGEAAPGFSAVLRTRANQAQHCYEKALAQQESLQGRLTVNLCVGVGGAVC
                     GASVSNDSLGSPMVAQCVTNIYRATTFPSPKNGCVDAQVPLNFLPEKK"
     gene            3032..3271
                     /locus_tag="VLJ38_00440"
     CDS             3032..3271
                     /locus_tag="VLJ38_00440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37988.1"
                     /translation="MTGRRSLVGLTCALVLGALLGLAAPGCGDNGQTPSCPPLSLYDI
                     NAAGEANSPKVAAERAAAVDAGCMTDLGDAQPAAP"
     gene            3268..>3868
                     /locus_tag="VLJ38_00445"
     CDS             3268..>3868
                     /locus_tag="VLJ38_00445"
                     /inference="COORDINATES: protein motif:HMM:NF013575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine synthase A"
                     /protein_id="HSU37989.1"
                     /translation="MTPRAHGVLLTVAYDGSRFSGFARQPTARTIAGELDGAVRAVAP
                     DASLVRGASRTDAGVHARGQRVAFDVDRALPARAWVHSLNRELPAEIVVRRAAGVEPG
                     FEPRFSARQKTYRYVILESVVRSPFWDARAWRLGERLNHELMRQAAAPLVGEHDFRAF
                     RAAEDQRENTVRRLFRIEVRTRSSDDGELTEIFVEGSGFL"
BASE COUNT          562 a         1372 c         1328 g          606 t
ORIGIN      
        1 cggcgacgac gagcacacgc tggccgagcg caagcatgcc gccgagcacg cgctcctggt
       61 cggcgtgctg cgggacatcg cgggcggccg cgtgcgcccg agtatcggag ccgagcggcc
      121 gagggtcggg tgagctcgcg attttacgac gcggtcgtgc tcgggcgctc gctcggcagc
      181 ctcacggtgg cgacgctgct cgcgcggcgt gactttcgcg tgctgctcgt cgggcaaggt
      241 caacgcccca cgacgtatcg cttcgatcga cgcgtgctcg cgcgccgcgc cttcacgctg
      301 ctttttgcgt cttcgcccgt gtggcggcgc atcgtgcacg agctcgcgca aagtccgcag
      361 tttcggcgcc gggcggtgcc gcaagatccg atgttcaccg tcctcgcggg ccggcagcgg
      421 ctcgagctac cgccggacgt cgagctcttc gcgcgcgaga tcgaacgcga gtttcccgaa
      481 gtgcgccagg tggtggacga gctttacacg acgatcgcgg gcgtgaacgc cgcggcggac
      541 accgccttcg accgtgacgg cgtgtggccg ccgggcaagc tctgggagcg cttcgaaacc
      601 ggccaggcgg cgtccctctt gccgttcggc aacggggagc gtgcgggcga gctcttcacg
      661 aagtttccga gcgggcacct ttatcgcgac atcgcgggcg taccggcgct cttcgccggg
      721 cacctcgcag gcacggccga gcaactcccc gcgctcgcgt tttcgcgcct gcacggcgcg
      781 tgggcgcgtg gcatcgcggc gctcgcgggc ggcgagcagg aattcgaggc gtatctcacg
      841 gaacgcttgg tcgcccacgg cggcgtctgc tcgctcgagc gccgcgccga gcggctcgtc
      901 gtgcggcatg gttcggccgt gggcgtcgtg ctcgacggcg acgacgagat gaccggcacg
      961 accgccgtca tcaccgatca atggggcgaa gcgctcgccg agctttcggg cggcgagggc
     1021 gtgacgcgcg ccgccgagcg cgattggccg cgcctcgcgc cggagaccgg acgcttcgtg
     1081 acgagcgcgc tcgttaggcg caagcttttg cccgaaaatc tagcgcctga atcgttcgtg
     1141 ctgccgcccg gcgcgccccg cgatccacgc aagcccgtcg tgcacttgca gtggttcgac
     1201 ggcaaagcgc tcgccgaagg cgcgcccgtc ccggacggtg aggcgctgct cgtggccgaa
     1261 acgctgttgc cggcgcgcgg cccgctcacg ttgctcgaag cacgcgcggc cgtcgtcgac
     1321 acgctccgca cggcgctccc gttcttcgac gaacacctcg tgctgctcga ttccgttcac
     1381 gacggactgc cgctgctcga cgcaagtgac ggcgggcgcc gggaaatcga ccgcattcac
     1441 gtcgagggcg cagccgcggg cgccgagccg atgcaacggc agtggacggt ggatccgccg
     1501 ggctatcgcc acctcgccgg ggagccgctg cgcgggccga ttccggggac gtttctggtc
     1561 ggcccgagcg tgctccccgc gctcgggcaa gaaggcgagc tgctcgcggc cgtgagcgtt
     1621 gctcgcctgg tgacgcggcg cgatcgcacg cggcagcgca tgcgccagaa gctctggtcc
     1681 aagatcgaga ccacatgagc gcaccgcgcg tgatcgccgg agcgttccgc ggtcgctcgc
     1741 tcaaggttcc acgcggcgcc gtgacgcggc cgacgggggc acgcgtgcgc gaggcgctct
     1801 tcaacgtgct cggtaatatc acgggcgtga aggtgctcga tctctacgcc ggcagcggcg
     1861 cgctcgcgtt cgaagcgctc tcgcgcggcg cggcacacgc agtgctcgtc gaacacgacc
     1921 gcgcggcgct cacctgcatt cgtgaaaacg ccgccgcgct gggcgtcgaa gctcgctgtg
     1981 caatcgtccc gctccccctg cctcgcgcgc tcgcgcaagc gacgcagcac gctcccttcg
     2041 acctcgtgtt ctgcgatcca ccttgggcgg atctccgagc cgcggcggac acgctcgagg
     2101 acctcgtccg aaggtgcgcg ctcgggtccg gcgcccggct cgtcctcgaa cactcggccc
     2161 gtgacgatgt gccccgtgtt tccggactcg aaccggccga tcggcgcgtt tggggcgata
     2221 cggcggtcgc gctactcgta cccggcgatc gcgggctatc cggcgaagaa ggccgaaccg
     2281 agccgtgagc cgcgaatatt ttccgacccg ccagcaccgc tatatagttc gctcggttgg
     2341 gccgtacggg gcgggagctc ccagacgtta gctccgccgt cccccgagcc acacaccctt
     2401 cagccaatat gccgccgacg aattctccgc cgtcatccct tccccctccg ccgccgaagc
     2461 atggcggcgg gcaattcatc gtcgccgtca tcgtgatgct gctgctcatg ggcggactcg
     2521 tgttctggaa gctgcacggt tcggacgaaa agtccggacc ggcgccttca ggactgtcga
     2581 cggtcgcaca ggagccgacg gcgaccgtgg atcaagtggt ccctccaccg ccccctcctc
     2641 cgagcgcttc ggccgaagac ggcggtacgc cgagcaccac caaaaagccc gtggcctcga
     2701 cgaacctcgg caccaactgc ggcagctgcg ggcattgcac gggtgaggcg gcgcccggat
     2761 tttctgccgt gctccgcacc cgcgcgaatc aggctcagca ctgttacgag aaggcgctcg
     2821 cccaacaaga gtcgctgcag ggccggctca ccgtgaatct ctgcgtgggc gtcggcggcg
     2881 ccgtttgcgg cgcgagcgtc agcaacgact cactcggcag tccgatggtc gcccagtgcg
     2941 tgacgaacat ttaccgtgcg accacgtttc cctcgccgaa aaacggttgc gtggacgccc
     3001 aagttccgct gaacttcttg cccgagaaga aatgaccgga cgccgttcgc tcgtcggctt
     3061 gacctgcgcg ctcgtgcttg gcgcgctgct cggtctggcg gctcccggct gcggggacaa
     3121 cggccagacg cccagctgtc cgccgctctc gctttacgac atcaacgcgg cgggcgaagc
     3181 gaactcaccc aaggtcgcgg ccgaacgagc cgccgcggtc gacgccggtt gcatgaccga
     3241 tctcggcgac gcacagccag cggccccgtg acgccgcgcg cgcacggcgt gctcctcacg
     3301 gtcgcgtacg acggcagtcg cttttccggt ttcgcgcgcc agccgacggc gcgcaccatc
     3361 gcaggcgagc tcgacggcgc cgtgcgtgcc gtcgcgccgg acgcaagcct cgtccgcgga
     3421 gcgagtcgta cggacgcggg agtgcacgcg cgtggacaac gcgtcgcgtt cgacgtcgac
     3481 cgcgcgctgc cggcgcgcgc gtgggtgcat tcgctgaacc gcgagctgcc ggccgagatc
     3541 gtcgtccggc gcgctgccgg cgtggaaccc ggtttcgaac cgcgcttttc ggcgcgacag
     3601 aagacgtacc gctacgtcat cctcgagagt gtcgtgcgca gcccattctg ggacgctcgc
     3661 gcctggcgcc tcggcgagag gttgaaccac gagctcatgc gccaagcggc ggcgccccta
     3721 gtcggcgagc acgacttccg cgcgttccgc gcagccgagg accaacgtga aaacacggtg
     3781 cgacgactgt ttcgcatcga ggtgcgaacg cgaagtagcg acgacggtga gctcaccgag
     3841 atcttcgtcg aaggcagcgg gttcctcc
//
LOCUS       DATIML010000030         1882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5203741, whole genome shotgun sequence.
ACCESSION   DATIML010000030 DATIML010000000
VERSION     DATIML010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5203741"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1509)
                     /locus_tag="VLJ38_00450"
     CDS             complement(<1..1509)
                     /locus_tag="VLJ38_00450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU37990.1"
                     /translation="MAEGSTRRRFRRSVAARVLASYALVTLAFAAVAGWSIVAQRSAA
                     QETRLVRSGYFPLALAVRDLVAKQDTWNTQLNHITAAKNPADIRVWFDVTLRVGRPRT
                     FDEVRGAIERAFLVEGDPAMRGVGDGLLHDVRDVETFVASDGLRLDRLFQALDRGDAT
                     AAELLRDELVTHGSQASARLAKLEQSVKRNVDLLLEAARTRELLAIRLLVALTVVALL
                     VGLAMAMYARRVLAPVAAVTERARAVARGDLEPKNAVVSDDEIGELAATFERMVAAIA
                     EANEQIVAAERLATIGKMAAHVTHEIRNPLSSIALNLELLEEQLPAGDAEAHVLFRAI
                     GKEVERLSALSQQYLSFARRKAPSRELEDVGQIALEAAEFVRPELAQHGVKLKLEVAP
                     DLPAVPGDEAQLKQALYNLLRNAREAMPAGGTVTLGVARDETHVRVSVDDEGKGIDPD
                     ARARLFEPFFTTKSGGTGLGLAITQHIVLSHGGSISCEPGPGGHGTRFAIKLP"
     gene            complement(1502..>1882)
                     /locus_tag="VLJ38_00455"
     CDS             complement(1502..>1882)
                     /locus_tag="VLJ38_00455"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HSU37991.1"
                     /translation="AAARRASKLGRVKLAGPVRFHDPCRLARGLGVIEEPRVVLERAL
                     GAPPAEFEHRGRAVSCSGAGALLPFAMPRTARAIARERLAEHERLGGGTLVTACATSL
                     AWFRAQGAPVLDLATILARSVTGG"
BASE COUNT          291 a          658 c          661 g          272 t
ORIGIN      
        1 cggcaacttg atggcgaagc gcgtgccgtg accacccgga ccgggctcgc agctgatcga
       61 gccgccgtgg gagagcacga tgtgctgagt gatcgcgagc ccgagcccgg taccgcccga
      121 cttcgtcgta aaaaatggct cgaatagccg ggcgcgcgcg tccgggtcga tacctttgcc
      181 ttcgtcgtcc acgctgaccc gcacgtgtgt ttcgtcgcgg gcgacaccga gcgtgacggt
      241 gccgcccgcc ggcatggcct cgcgcgcgtt gcgcaagaga ttgtagagcg cttgcttgag
      301 ctgcgcctcg tcgccgggca cggcgggtaa gtcgggcgcg acctcgagct tgagcttcac
      361 gccgtgctgc gcgagctcgg gtcgcacgaa ctcggcggcc tcgagcgcga tttggcccac
      421 gtcctcgagc tcgcgcgacg gcgctttgcg acgcgcgaac gaaaggtatt gctggctcaa
      481 ggccgacagg cgctcgactt ccttgccgat cgcgcgaaat aggacgtgcg cttcggcgtc
      541 gcccgccggg agttgctcct cgagtaactc gaggttcaac gcgatcgacg agagtggatt
      601 gcggatttcg tgcgtgacgt gcgcggccat tttgccgatg gtcgcgagcc gctcggccgc
      661 gacgatttgc tcgttggcct cggcaatagc ggcgaccatg cgttcgaatg tcgccgcgag
      721 ctcgccgatt tcgtcgtcgg agaccacggc atttttcggc tcgagatcac cgcgcgccac
      781 cgcacgggcg cgctccgtca ccgcggcgac cggcgcgagc acgcgccgcg cgtacatcgc
      841 catggcgaga cccacgagca gcgcgacgac cgtgagcgcc acgagcaaac gaatcgccaa
      901 aagctcgcgc gtacgggccg cttcgagcag gagatcgacg tttcgcttga cgctctgctc
      961 gagcttggcg agccgcgccg acgcctgcga gccgtgcgtc acgagctcgt cgcgcaggag
     1021 ctcggcggcc gtggcgtcac cgcgatcgag cgcttgaaac agccgatcga ggcgcaagcc
     1081 gtcgctcgcg acgaaggtct cgacgtcgcg cacgtcgtgg agcaagccgt cgccgacgcc
     1141 gcgcatcgcc ggatcgccct cgacgagaaa cgcgcgctcg atcgcgccgc gcacttcgtc
     1201 gaacgtgcgc ggccggccca cgcgcagcgt cacgtcgaac caaacccgga tgtcggcggg
     1261 atttttggcg gccgtgatgt gattgagctg ggtgttccag gtgtcttgct tggcgacgag
     1321 atcccggacg gcgagcgcga gcgggaagta gccgctgcgc acgagccgcg tctcctgcgc
     1381 cgccgaccgc tgggcgacga tgctccagcc ggcgacggcg gcgaacgcga gcgtcacgag
     1441 tgcgtaggag gcgagcacgc gcgcggcgac gctgcggcga aagcgccgcc tggtgctgcc
     1501 ttcagccacc cgtgacgctc cgcgcgagga tcgtcgcgag atcgagcacg ggcgcgccct
     1561 gcgctcgaaa ccaggcgaga ctcgtcgcgc acgccgtgac gagcgtgccg ccgccaagcc
     1621 gctcgtgctc ggccaggcgc tcccgggcga tcgctcgcgc cgtcctcggc atcgcgaacg
     1681 gcaagagggc acccgccccc gaacagctca cggcgcggcc ccggtgctcg aactccgcgg
     1741 gcggagcgcc gagggcgcgt tcgagcacga cgcgcggctc ctcgatgacc ccgagcccgc
     1801 gcgcaaggcg gcacggatcg tgaaaacgca ccggcccggc gagcttcacg cgcccgagct
     1861 tcgaagcgcg ccgcgcagcc gc
//
LOCUS       DATIML010000031         1734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1161003, whole genome shotgun sequence.
ACCESSION   DATIML010000031 DATIML010000000
VERSION     DATIML010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1161003"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..509
                     /locus_tag="VLJ38_00460"
     CDS             102..509
                     /locus_tag="VLJ38_00460"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HSU37992.1"
                     /translation="MRRAPSKAETVNKTAPKTEPAKASPKTESVNAPSAKSAPAKSDS
                     AVVRTTPTEPHGSWTIQLAAYNTRPDAERLVAKLAGRGVKARISGATKPYRVRLDYYR
                     TRQDATAAVAELKARGIIGFVTEEARSNAGSTP"
     gene            506..>1734
                     /locus_tag="VLJ38_00465"
     CDS             506..>1734
                     /locus_tag="VLJ38_00465"
                     /inference="COORDINATES: protein motif:HMM:NF017039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HSU37993.1"
                     /translation="MSGAAATPLMQQYREIKARHQSAILFFRMGDFYEMFYEDAETAA
                     RVLGLTLTSRNNGGAAEVPLAGVPVRAGQEYLRRLVRHGYRVAICEQVEDPKQAKGIV
                     RREVVETVSPGAAFADDLLDGTRNNFIAALRSADVRDEHGRPVMGVAAADISTGELRL
                     CVVPGEELDATLARFAPRELLVPRGSEVLPRSGALDGVLVSEREGWEFDEAMARDDLA
                     RQFGVRGLDGLGLESVDGPAIGAAGALLRYLNELQPAGVPHLARPHVERRGGTMPLDE
                     MTRRNLELVESLRGGSTEGTLLSVLDRTTTPMGSRLLRQWLLAPLVQRTTIEARHEAV
                     EALLRDASARDALRTALDGVRDVERLGGKAAAGRATPRELSALGQSLARLPDVERAAR
                     RLGGAGVVAGLLEQWDG"
BASE COUNT          305 a          555 c          633 g          241 t
ORIGIN      
        1 cagctgcgtc acccgcgagc cgaaacgcga aggcggcgtc cgaagcaacc acggagcgca
       61 ggggagctgc acccccgcac gctcccgcga aggctgagag cgtgcgacgg gcgccgtcga
      121 aagcggagac cgtaaataag acggcgccca agacggagcc ggcgaaggcg tcaccgaaaa
      181 cggagtcggt gaatgcccct tcggcgaagt ccgcacccgc gaagtccgac agcgccgtcg
      241 tgcggacgac gccgaccgag ccacacggaa gctggacgat tcagctcgcc gcgtacaata
      301 cgcgtcccga cgcggagcga ctggttgcga agctcgccgg gcgcggggtg aaagcacgga
      361 tcagtggcgc gacgaaaccc tatcgagtgc ggctcgacta ctacagaacg cgccaggacg
      421 cgaccgctgc cgtcgccgaa ctgaaggcgc gtggcatcat cggcttcgtc accgaggaag
      481 ccagatcgaa cgcggggtcg actccgtgag cggtgcggcc gcaacgccgt tgatgcagca
      541 gtatcgggag atcaaggcgc gacatcagag cgcgatcctg ttcttccgaa tgggcgattt
      601 ctacgagatg ttctacgagg acgccgagac ggccgcgcgc gtgctcggac tgacgctcac
      661 gtcgcgcaac aatggtggtg cggcggaggt tccactggcc ggggttccgg tgcgcgccgg
      721 ccaggaatac ctgcgacgac tcgtgcgtca cggctatcgc gtggcgatct gtgaacaggt
      781 cgaagatccc aagcaggcga agggaatcgt gcggcgcgag gtcgtcgaaa cggtttcgcc
      841 gggcgcagcg ttcgccgacg acctgctgga cggcacgcgc aacaatttca tcgcggcact
      901 ccgcagcgcc gacgtgcgcg acgagcatgg ccgcccggtg atgggcgtcg ccgcagcgga
      961 catctcgact ggagagctcc ggctctgcgt cgtgccgggt gaagagctcg acgcgacgct
     1021 cgctcgattt gcgccgaggg agctgctcgt gcctcgcggc agcgaagtcc ttccgagaag
     1081 cggcgctctc gacggcgtgc tcgtgtcgga gcgtgaaggg tgggagttcg acgaagccat
     1141 ggcgcgcgac gatctcgctc gacagttcgg cgttcgcggg ctcgacggac tggggctcga
     1201 aagcgtcgac ggcccggcga tcggcgccgc cggtgcgctg cttcgctatc tcaacgagct
     1261 gcagcccgcg ggtgtgccgc atctcgcgcg gcctcacgtg gagcgtcgag gcgggacgat
     1321 gccgctcgac gagatgacgc gccgcaatct ggagctcgtc gagtcgctgc ggggcgggag
     1381 cacggaggga acgctgctct ccgtgctcga tcgcacgacg actccaatgg gatcccggct
     1441 gcttcggcaa tggctgctcg caccgctcgt gcagcgcacg acgatcgaag caagacacga
     1501 ggccgtcgag gcactgctcc gcgacgcgag cgcgcgtgac gcactgcgca cggcgctcga
     1561 cggtgtgcgc gacgtggaac ggctgggggg aaaggccgcc gccggacgtg caacgccgcg
     1621 agagctctcg gcgctcgggc aatcgctcgc gcgtcttccg gacgtcgaac gcgccgcgcg
     1681 tcggctcggt ggtgcgggcg tggtcgccgg actactcgag cagtgggacg gatg
//
LOCUS       DATIML010000032         2828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2316133, whole genome shotgun sequence.
ACCESSION   DATIML010000032 DATIML010000000
VERSION     DATIML010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2316133"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VLJ38_00470"
     CDS             complement(<1..271)
                     /locus_tag="VLJ38_00470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37994.1"
                     /translation="MSAFLSYVLHGLAIGCGFALLAGGIIIIYRVTLVVNLAQGTFAV
                     LAAFMTTTLLGAGLPHGVAELFATLVAALAGGVTGVVAVGKKGTTP"
     gene            complement(268..942)
                     /locus_tag="VLJ38_00475"
     CDS             complement(268..942)
                     /locus_tag="VLJ38_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017405995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU37995.1"
                     /translation="MSILAVDDLVVRYGSATALHGVSLTVAAGEMVALIGANGAGKST
                     LLKAVSGVLERADGDVRIHGRLAHVPEGRQLFPDLAVEDNLRLGGFRTRDRDTAWIYR
                     LLPELERTKKQLAGTLSGGQQQMVAIGRGLMSRPDVLAIDEMSLGLAPIIVQKLARIL
                     EQLNTEHGLAVLLVEQSARVAFSLCKRAYVLETGRIVASGTTAELARSHLVERAYLGS
                     AGVAAP"
     gene            complement(939..1700)
                     /locus_tag="VLJ38_00480"
     CDS             complement(939..1700)
                     /locus_tag="VLJ38_00480"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU37996.1"
                     /translation="MLRVEGLSRRFGGVYALDDVSLRVEPGELRGIIGPNGAGKSTLF
                     NLITGHLRQNSGHVFFRDEAIDALGSHERARRGIAVVYQGARIFRGMTVLENVMVGAH
                     RRTQHGFLEAALRSPRSRREEEAVRLLASALLTAVGLGGLGDRPAESLPLGQQRSLQL
                     ARALAAEPALLLLDEPASGLREAERRHFAELIQGLRSSGLTIVLVEHDVPLVTSLSDR
                     ITVLDLGRVIAEGTPAAVREDRAVISAYLGSPSVP"
     gene            complement(1706..>2828)
                     /locus_tag="VLJ38_00485"
     CDS             complement(1706..>2828)
                     /locus_tag="VLJ38_00485"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU37997.1"
                     /translation="ATTETNDTIQVGLIASLTGKFSALGSEDKKAVELAIEQANSKGG
                     VLGKKITLVTRDDRTLPDQSVLAYNELKSANVVAIIGSAFSNSALATLPLADHDGIPY
                     LSLTPAEEQVQPIRPYVFVIPALSTAYAERNLEYMQAQKIKKIAVAHDTKGAYAVAGY
                     NATKSLAPRYGVELVRDEEFEMTTSDFSPLFTHLKGSGAQAFVFWGTGPSGVTVTKQY
                     AAANLKIPLFMTPSQASKLWLEPVGAAGEGVTVLSAIGVVGEYLPDGPQKRVISEMAE
                     PFKQKYGYAPPQFAQDGYSACLLLFEAMKKASSVKRDQIRQALEQLTLLTPNGQYRYS
                     KTDHSGLTREFISVNVVQGGKFVPTPWAKEQLVRAVAAE"
BASE COUNT          471 a          940 c          945 g          472 t
ORIGIN      
        1 gcggcgtcgt gcccttcttg cccacggcga cgacgcccgt gacccctccg gcgagcgccg
       61 cgacgagcgt cgcgaagagc tcggcgacgc cgtgcggcag gccggcgccg agcaacgtcg
      121 tcgtcatgaa cgcggcgagc acggcgaacg tcccctgcgc gaggttcacg acgagcgtca
      181 cccgatagat gatgatgatg ccgcccgcga gcagcgcaaa cccacagccg atggcaaggc
      241 cgtgcaagac gtaggacagg aacgcgctca cggtgctgcg acgcctgcgc taccgaggta
      301 agcacgctcg accaaatgac tccgcgcgag ctcggccgtc gtgccgctcg cgacgatcct
      361 tccggtttcg agcacgtaag cgcgcttgca caacgaaaaa gccacccgcg cgctctgctc
      421 cacgagcagg acggccagcc cgtgctcggt gttcagctgc tcgaggatac gagcgagctt
      481 ctgcacgatg atcggcgcga gcccgagtga catctcgtcg atggccagca cgtccggccg
      541 ggacatcaag ccgcggccga tcgcgaccat ttgctgttgg ccgccggaca gggtgcccgc
      601 gagctgcttc ttcgtgcgct cgagctcggg caagaggcgg tagatccacg ccgtatctcg
      661 gtctcgcgtc cggaagccgc cgagccgcag gttgtcttcg accgcaaggt cgggaaatag
      721 ctgccgtccc tcgggcacgt gcgcgagtcg tccgtgaatg cgaacgtcgc cgtccgcccg
      781 ctcgagcacg ccggacacgg ccttgagcag cgtcgatttg ccggcgccgt tcgcgccgat
      841 tagcgcgacc atctcgcccg ccgccaccgt gagcgacacg ccgtggagcg ccgtcgcgga
      901 gccgtaacgc acgaccagat cgtcgacggc gaggatgctc atgggacgct cggcgagccg
      961 aggtaggcgc tgatgacggc gcgatcttcg cgcacggcgg cgggcgttcc ttccgcgatc
     1021 acgcgcccga gatcgaggac ggtgatacgg tccgagagac tcgtgacgag cggcacgtca
     1081 tgctcgacga gcacgatcgt gagcccgctc gagcgcagac cctgaatcag ttcggcgaaa
     1141 tgccgtcgct ccgcttcacg caaccccgac gccggctcgt ccaagagcag cagggcgggt
     1201 tcggcggcca atgctcgcgc gagctgcagc gaccgctgct ggccgagcgg cagcgactcg
     1261 gcgggccgat caccgagtcc tccgagcccc acggcggtga gcagtgccga agccaacagg
     1321 cgcacggcct cctcttcgcg ccggctgcgg ggtgagcgga gcgcggcctc gagaaacccg
     1381 tgctgcgtcc gccgatgcgc tccgaccatc acgttttcga gcacggtcat gccgcggaaa
     1441 atgcgcgcgc cctgatacac gacggcgatg ccgcggcgcg ctcgctcgtg cgacccgagt
     1501 gcgtcgatgg cttcgtcgcg aaaaaacaca tggccgctat tttgacgcag gtgtcccgtg
     1561 atcagattga agagcgtcga cttgcctgcg ccgttcggcc cgatgatgcc ccggagctct
     1621 ccgggttcga cccgcaagct cacgtcgtcg agggcgtaca cgccaccgaa acgacggctg
     1681 agcccttcga cgcggagcat cgcacttact cggcggcgac ggctcgcacg agctgttcct
     1741 tcgcccacgg cgtcgggacg aacttcccgc cctgtacgac gttcacggaa atgaactcgc
     1801 gcgtcaggcc ggagtgatcc gtctttgagt agcgatactg accattcggg gtcaagagcg
     1861 tcagctgctc gagcgcttgg cggatctgat cgcgtttcac gctgctggcc ttcttcatcg
     1921 cctcgaacag gagcaagcaa gcactgtagc cgtcctgcgc gaactgaggc ggcgcgtagc
     1981 cgtatttctg cttaaagggc tcggccatct cggagatcac gcgcttctgc gggccgtcgg
     2041 gcaggtactc gcccacgacg ccgatcgcgc tgagcacggt gacgccttcg ccggcagcgc
     2101 ccacgggctc gagccacaac ttgctcgctt gggacggcgt catgaagagc gggatcttca
     2161 ggttggccgc ggcatactgc ttcgtgaccg tgacgcccga cgggccggtg ccccagaaca
     2221 cgaaagcttg cgccccggag cccttgaggt gcgtgaacag cggactaaag tcgctggtcg
     2281 tcatctcgaa ctcctcgtcc cgcacgagct cgacgccata gcgcggggcg agtgacttcg
     2341 tcgcgttgta gcccgcgacg gcgtaagcgc ccttcgtatc gtgcgcgacg gcgatcttct
     2401 tgatcttctg cgcctgcatg tactcgaggt tgcgctcggc gtaagcggtc gagagcgccg
     2461 ggatcacgaa gacgtacggc ctgatcggct gaacctgttc ctccgcgggc gtgagcgaga
     2521 ggtaggggat gccgtcgtga tcggcgagcg gcagcgtcgc gagcgcggag ttcgagaacg
     2581 ccgagccgat gatggctacg acgttggcgg acttgagctc gttgtaggcc agcaccgatt
     2641 ggtccggcag ggtgcgatcg tcacgcgtga cgagtgtgat cttcttgccc aggacgccgc
     2701 ctttggagtt cgcttgctcg atcgcgagct ccacggcttt cttgtcctcg ctgccgagcg
     2761 cggagaattt gccggtgagc gacgcgatca gcccgacttg aatggtgtcg ttcgtctcgg
     2821 tcgtggcg
//
LOCUS       DATIML010000033         2188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4915499, whole genome shotgun sequence.
ACCESSION   DATIML010000033 DATIML010000000
VERSION     DATIML010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4915499"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VLJ38_00490"
     CDS             complement(<1..857)
                     /locus_tag="VLJ38_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSU37998.1"
                     /translation="MTNHAVVIAGGGPTGLMLAAELALAKIDVAIVERRASQELAGSR
                     AGGLHARTLEVLDQRGVADRFLTQGKIMQVAGFAMIRLDISDFPTRHNYGLALWQKRI
                     EELLADWVRELAVPIYRSRDVTGFTQDAAGVEVELSEGGSLRAQYLVGCDGGRSLVRK
                     QAGIDFPGADASVSYLIAEAEMTGEPEGAVRRGDKGINALGRIDDGKRVRAVLIEQHV
                     KQGDEPTLDDLREALIAVYGSDYGVRNVTWLSRFTDTTRQAASYRSGRVLVAGDAAHI
                     HAPTGGQGL"
     gene            1009..1230
                     /locus_tag="VLJ38_00495"
     CDS             1009..1230
                     /locus_tag="VLJ38_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU37999.1"
                     /translation="MNRLAADHLADVLAELRARQWHFVSLSEALSDPVYSLPDVYTGG
                     CGCSWLAHIAPALTPDDTYVFGDDEAQIR"
     gene            1418..>2188
                     /locus_tag="VLJ38_00500"
     CDS             1418..>2188
                     /locus_tag="VLJ38_00500"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38000.1"
                     /translation="MSASSIGRAKIKLPEYRAQLAVVVATAPSGPRWVHELKYDGYRV
                     GCVINDGVVTLQGARGEDCTARFPEIVEAAKRLKVRQAVLDGEVALVLADGRTSLPAL
                     EQASSAAARRAVSYFVFDLLRLDGDNVAALALEERKQCCEKLLAPLKGKVIRYSAHFE
                     ADGPTVFERACELGAPGIVSKRRDRPYRPGRNADWRTTNCVAAASRSGGTSVAGVAIT
                     TPERPVYPELGLTKLDLARYYAEIAERMLPYVENRPLTL"
BASE COUNT          345 a          715 c          738 g          390 t
ORIGIN      
        1 ttgagtccct ggccgcccgt gggcgcgtga atgtgcgccg cgtcgcccgc cacgagcact
       61 cgcccactgc gatagctcgc ggcctgccgc gtggtgtcgg tgaagcgcga gagccaggtg
      121 acgttccgga cgccgtaatc gctgccgtag accgcgatga gcgcctcgcg caggtcgtcc
      181 agcgtcggct cgtcaccttg cttcacgtgt tgctcgatca ggacggcccg cacgcgcttg
      241 ccgtcgtcga tgcgtccgag cgcgttgatg cccttgtcac cgcggcgcac ggccccctcg
      301 ggttcgcccg tcatttcggc ttcggcaatc aagtagctga cggacgcatc cgcgcccggg
      361 aagtcgatgc cggcttgctt gcggaccagg ctgcgcccgc cgtcgcagcc gacgaggtac
      421 tgcgcgcgta acgagccgcc ctccgagagc tcgacctcga cgcccgcagc gtcctgcgtg
      481 aagcccgtta cgtcacggct gcggtagatg ggcaccgcga gctcgcgcac ccaatcggct
      541 aggagctcct cgatgcgctt ttgccacagc gcgagcccgt agttgtggcg cgtcgggaag
      601 tcgctgatgt cgagccgaat catggcaaaa cccgcgacct gcatgatctt gccctgcgtg
      661 agaaaacgat cggcgacgcc acgctgatcg agcacctcga gcgtgcgtgc atgcagaccg
      721 cccgcgcgcg acccggcgag ctcttggctc gcgcgtcgct cgacgatcgc gacatcgatc
      781 ttcgcgagcg cgagctcggc cgccaacatg agccccgtcg gacctcctcc agcgatgacc
      841 acggcatggt tcgtcatggc cgggcactct gcggcacgat agggggcttg ccgcaaggcc
      901 ccgtttctgg catacgttca gggtgggaag ggacgggcag cgcgcacggc gtctggttcc
      961 gtaacggctt cgcgggaaag cgcggcgcgc taattttttt cccatgacgt gaatcgtctg
     1021 gccgccgacc acttggcgga cgtgctcgcg gagctacggg cgcggcagtg gcatttcgtg
     1081 tccttgagcg aagccctgtc cgatccggtg tactcgttgc ccgacgttta taccggcggc
     1141 tgtggctgtt cttggctcgc gcacatcgcg ccggcgctca cgcccgacga tacttacgtc
     1201 ttcggcgacg acgaggcaca gattcggtag cgcttcgaac agcgtgttca agccttgcaa
     1261 gcgcgctgac gccgctgcgt cctcgcctga tcggcatcac cgatatcggc gggtggattc
     1321 cagagagcat aaaatcgagg atttccatcg cttcttcacg ggacagcgtc tagcgcatcc
     1381 ccatcgctcg ggacccgaag cgtgctagcc cgccagggtg agcgcatcgt caatcggacg
     1441 cgccaagatc aagcttcccg agtatcgagc acagctcgcg gtggtcgtcg cgacggcgcc
     1501 gagcgggccg cgctgggtcc atgagctgaa gtacgatggt taccgagtcg gctgcgtcat
     1561 caacgacggt gtagtgacgc tccaaggtgc gcggggtgag gactgcacgg cgcgttttcc
     1621 ggaaatcgtc gaggcggcga agcgactgaa ggttcggcaa gcggtgctcg acggtgaggt
     1681 cgcgttggtg cttgctgacg gccggacgag tcttccggcg ctcgagcaag cgtcttcagc
     1741 tgcggctcgc cgtgcggtca gctacttcgt gttcgatctg ctgcgtctcg acggcgacaa
     1801 cgtggcggcg ctcgcgctgg aagagcgcaa gcagtgttgc gagaagctgc tcgctccgct
     1861 gaaggggaag gtcatccgct actcggcgca cttcgaggct gacggtccca cggtgttcga
     1921 gcgcgcgtgc gagcttggag cgccgggcat cgtgtcgaaa cggcgagatc gaccgtatcg
     1981 accagggcga aacgctgact ggcgaacgac gaactgcgtc gccgctgcgt cgcgctcggg
     2041 cgggacgagc gtcgcggggg tcgcgatcac gacgccggag cgtcccgtgt atccggagct
     2101 cggcctcacg aagctcgacc tcgcgcgcta ctacgccgag atcgcggagc gcatgctgcc
     2161 ctacgtcgag aatcggccgc tcacgctc
//
LOCUS       DATIML010000034         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3471996, whole genome shotgun sequence.
ACCESSION   DATIML010000034 DATIML010000000
VERSION     DATIML010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3471996"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VLJ38_00505"
     CDS             complement(<1..288)
                     /locus_tag="VLJ38_00505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38001.1"
                     /translation="MAFVGSRSLRCYSFASAARRGVFVAAALLVASPPAFAAGRMIHV
                     EPMAGEKIRIDGDLREWPAKLTELGETVQGSASGGDPKAGVVLGYDDSALYC"
     gene            complement(414..>1673)
                     /locus_tag="VLJ38_00510"
     CDS             complement(414..>1673)
                     /locus_tag="VLJ38_00510"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HSU38002.1"
                     /translation="AASGGKSGSGGGVARAGQGGAAAQGGSAPNANAVGGTSGHGRNG
                     EAGDDSEPSRDGEGGESDPPHPTGEGGKSGAPAAAGRSSGGAASAAGAGGRVDAMGGM
                     SGSSGKAGLAGTTAVSLGDTTAPQLTHMVPPNAATGVKSDTDIVLTFSEPMDTRSVEA
                     AYQSNDLPPALVDFSWKNDSTMLVIHPKSPLVYADVTDLSANAHRYSYALAQTATDLA
                     GNHLASLPGTTSVELEFTTLRHVTQALPVKSGGGLLATQTPTGAVTTVTRCDVAGSYL
                     TAGDDAQNDAYLALATFDLSSVPSGVEWQSATLTSSLSTSTLNPYIDGRLGDLHAFST
                     TIDPVMLTWSSSMTDLGAFGRYGSQTDAALDVQSAVVEDYAHRTERGNRSEYVFHFDV
                     ETDNNDAGSTARLNCANILLNLDYLAP"
BASE COUNT          253 a          563 c          562 g          295 t
ORIGIN      
        1 gcagtagagc gcgctgtcgt cgtaaccgag cacgacgccc gccttcggat cgccgccgct
       61 cgccgagcct tgcacggttt caccgagctc cgtcagcttc gccggccact cgcgcaaatc
      121 gccgtcgatg cggatctttt cgcccgccat cggctcgacg tgaatcatgc gtccagcggc
      181 gaacgcgggc ggcgaagcga cgaggagtgc ggcagcgacg aacacgccgc gtcgcgcggc
      241 cgaagcaaac gagtagcaac gaagtgagcg cgagccgacg aacgccatgg gcggcgcagc
      301 ctatcatgaa cgcgcgctcg gccgcgcagg gcgctcgcga ccgcggtgag cgccctgcgt
      361 ggcacattgc aactgggttt gagtcgagcg cagtcggagg cctcttcaac gagtcagggc
      421 gcgaggtagt ccagattgag gagaatgttc gcgcaattca ggcgtgccgt gctgcccgcg
      481 tcgttgttgt cggtctcgac gtcgaaatga aagacgtact cggagcggtt gccgcgttcg
      541 gtgcggtgcg cgtaatcctc gaccactgca ctttggacgt cgagcgccgc gtcggtttga
      601 ctcccgtagc gtccgaacgc gccgagatcc gtcatgctcg agctccacgt gagcatcact
      661 gggtcgatgg tcgtgctgaa cgcgtgcagg tcgccgagcc ttccgtcgat gtagggattc
      721 agggtcgacg tgctgagcga gctcgtgagc gtcgcgcttt gccattcgac gccgctcggc
      781 acggacgaaa ggtcgaaggt cgcgagcgcc aggtacgcgt cgttctgcgc gtcatcgccc
      841 gccgtgaggt agctgccggc gacatcgcag cgagtcacgg tcgtgactgc accggtgggc
      901 gtctgggtgg ctaacaggcc gccaccggac ttcacgggca gcgcttgggt gacatggcgt
      961 agcgtcgtga actcgagctc gacgctcgtc gtgccgggaa ggctcgccag gtgattgccg
     1021 gccaagtccg ttgcggtttg agcgagtgcg tacgagtagc ggtgcgcgtt cgcgctcaag
     1081 tccgtcacgt cagcatagac gagcggcgac ttcgggtgaa tcacgagcat cgtgctgtcg
     1141 ttcttccacg aaaaatcgac gagcgcgggc ggcaagtcgt tcgactggta cgcggcttcg
     1201 accgagcgcg tatccattgg ctcgctgaac gtgagcacga tgtccgtgtc actcttcacg
     1261 cccgtcgcgg cgttcggcgg caccatgtgc gtgagttgcg gtgccgtggt gtcaccgagt
     1321 gataccgcgg tggtcccggc gagaccggcc ttgcccgagc tgccggacat gccgcccatc
     1381 gcgtctacgc gaccgcccgc gcctgccgcg ctcgctgctc cgccgctcga gcgccctgcc
     1441 gctgcaggcg cgccgctctt gccgccctcg cccgtcggat gaggcggatc cgactcacca
     1501 ccctcgccgt cacggctcgg ctccgagtcg tcacccgctt cgccgttacg gccatggccg
     1561 ctcgtgccac cgaccgcatt cgcgttcgga gcgctaccgc cttgagcagc cgctccgccc
     1621 tggccggctc tcgcgactcc accgccgctg ccgctcttac cgccagaagc ggc
//
LOCUS       DATIML010000035         2372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_873746, whole genome shotgun sequence.
ACCESSION   DATIML010000035 DATIML010000000
VERSION     DATIML010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_873746"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1116
                     /locus_tag="VLJ38_00515"
     CDS             <1..1116
                     /locus_tag="VLJ38_00515"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSU38003.1"
                     /translation="HIDAPLARFDFAPGERAVVDVLRAKPQTLAELSGRDLLEPALLE
                     RLVYTLVLLRQFDLGTGAQPVGAERRSLSPTSSLVPPAPRPTSPSLSEIDLPPTAPSE
                     PPPDDPFRREAEELAALSDRSYYEVLGVPSGAPAPAIAAAYFQLAKRWHPDRLDAGHA
                     DLRDLAIRIFARIGEAHQTLSDAERRKQYDESLKHAGEADEELEQVQRLLRAATNFQK
                     AQVLLRRNNLPAAEEAARAALADAPDEADHIALVAWLDASKAGADLEGGLKALNRAVE
                     LEQANLRVRWYRGQLLKRLGRERQAIEDFRLIVERDPRHVDAQRELRLFDMQRGRKSS
                     SDAPNERRSETQAPGRLSTASPPGDKKPNFFGKLFKK"
     gene            complement(1102..>2372)
                     /locus_tag="VLJ38_00520"
     CDS             complement(1102..>2372)
                     /locus_tag="VLJ38_00520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38004.1"
                     /translation="GQLIRQFEAVSPNTKSSSISNLSSLDLGRVDPVALVLTNGRILV
                     GGGYMPSGDADAPGGAAVGQIEAFSADARSRVFRAELPARTNRTFAALPGGGALSVAS
                     CRNEPAPLRTDCSCVTSEGTTCTSANSNQAWLDAWWIDPSGTPTPVAFETNGVLAPCA
                     TVDTPLLAAGSDGAPWLAFPNADGTPACLWRFEAWPAVADANDPASRPRFVMTTRTLD
                     PSPDPRSSLLSLGPDAFEWVGTNGGLFGARFGQRGPLSRDFSLLLSLDTPFRPAHLVP
                     DRDATRPPSGSNSPPVAFERVGSRLTLTPVEPSVTIWATDTLYDGVALSLEVEPPSDG
                     SAPALPLLVFQSPTGATATCAWNPPPLGAASTPITVTASRNDTRATLSAPDVADTTCD
                     VPPGSLAVGTRAGSGTVTLGELELSRLLLE"
BASE COUNT          397 a          797 c          836 g          342 t
ORIGIN      
        1 cacatcgacg cgccgctcgc gcggttcgac ttcgcgccgg gtgagcgtgc agtcgtcgac
       61 gtattgcgcg cgaaacccca aacgctcgcc gagctcagcg gacgcgatct gctcgaaccg
      121 gcgctgctcg aacggctcgt gtacacgctc gtactcttgc gccagttcga ccttggcacg
      181 ggagcgcagc cggtaggcgc tgaacgtcgc agcctgtcgc cgacctcgag cctcgttccg
      241 cccgcgcctc gaccgacctc gccgagcctc agcgaaatcg atttaccccc gaccgcgccg
      301 agcgaaccgc cgcccgacga cccgtttcgg cgcgaggccg aggagctcgc cgccctcagc
      361 gaccgctcgt attacgaggt actcggggtg ccgagcggcg cgcccgcgcc ggccattgcc
      421 gcggcatact ttcagctcgc gaagcgctgg caccccgacc ggctcgacgc cggtcatgcc
      481 gacttgcgcg atctggccat tcgcatcttc gcgcgaatcg gcgaagcgca tcaaaccttg
      541 tcggacgcgg agcggcgcaa gcaatacgac gagtcgctga agcacgcggg cgaggcagac
      601 gaagaactgg aacaagtgca gcggctactg cgcgccgcaa cgaacttcca aaaggcgcag
      661 gtgctgctcc ggcgcaataa cctgcccgct gccgaagaag cagcgcgcgc cgcgctcgcg
      721 gacgcgccgg acgaagccga ccacatcgcg ctcgtcgctt ggctcgacgc cagcaaagcg
      781 ggggcggatc tcgaaggcgg actcaaggcg ctcaatcgcg cggtggagct cgagcaggcg
      841 aacctgcggg tgcgctggta tcgggggcag ttgctcaagc gcctcggtcg cgagcgccag
      901 gcgatcgagg actttcgact gatcgtcgag cgcgacccac ggcacgtgga cgcgcagcgc
      961 gagctccggc tgttcgacat gcagcggggc cgtaagtcgt cgagcgacgc gccgaacgag
     1021 cgccggagcg aaacgcaggc gccggggcgc ttgtcgactg cgtcgccgcc gggcgacaaa
     1081 aagccgaatt ttttcggcaa gttattcaag aagtagtctc gacagctcga gctcgcccag
     1141 cgtgaccgtg ccggagcccg cgcgggtgcc gactgcgagc gaacccggcg ggacgtcgca
     1201 cgtcgtgtcg gcgacgtccg gcgcggagag cgttgcccgc gtgtcgttgc gcgaggctgt
     1261 gacggtgatg ggcgtcgaag ccgcaccaag tggcggtggg ttccacgcgc aggtcgccgt
     1321 cgcgcctgtc gggctttgga agacgagcag ggggagcgcg ggcgctgagc cgtcgctcgg
     1381 gggttcgact tcgagcgaga gcgcgacgcc gtcgtacagc gtgtccgtcg cccagatcgt
     1441 gacgctcggc tcaacgggcg tgagcgtgag tcggctgccc acgcgctcga acgcgacggg
     1501 aggtgagttc gagccgcttg gcgggcgtgt agcgtcgcga tcgggcacga gatgcgccgg
     1561 gcgaaacggg gtgtcgaggc tcaaaagcag cgaaaaatcg cggctgagcg gcccacgttg
     1621 cccaaaacgc gcgccgaaaa gcccgccgtt cgtgccgacc cactcgaacg catccgggcc
     1681 caagctgagt agcgatgagc gtggatccgg gctcggatcg agcgtgcgtg tcgtcatgac
     1741 gaagcgcggt cgggacgcgg gatcgttcgc gtcggcgact gcgggccagg cttcgaatcg
     1801 ccagagacac gcaggcgttc cgtcggcgtt cgggaaggcg agccacggcg cgccgtcgct
     1861 gccggcggcg agcaacggcg tgtcgacggt ggcgcacggt gcgagcacgc cattggtctc
     1921 gaacgcgact ggcgtcggcg tgccgctcgg atcgatccac cacgcgtcga gccaggcttg
     1981 attcgagttg gcagacgtac acgtcgtgcc ctccgacgtg acgcagctgc agtccgtgcg
     2041 cagcggggcc ggttcgttgc gacaactcgc gacgctgagc gcgccgcctc ccggtagcgc
     2101 cgcgaacgtc cggttcgtgc gcgccggcag ctcggcgcgg aacacgcggc tcctcgcgtc
     2161 cgcagaaaac gcctcgattt ggcctaccgc ggcgccccct ggcgcgtccg cgtcgccgct
     2221 cggcatgtaa ccaccaccca ccaaaatcct accgttggtg agcacgagcg cgaccggatc
     2281 cacgcgaccg agatccagcg acgacaagtt gctgatgctc gagctcttcg tgttgggtga
     2341 gacggcctcg aattggcgaa tgagctggcc cg
//
LOCUS       DATIML010000036         4134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1740425, whole genome shotgun sequence.
ACCESSION   DATIML010000036 DATIML010000000
VERSION     DATIML010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4134
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1740425"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1790)
                     /locus_tag="VLJ38_00525"
     CDS             complement(<1..1790)
                     /locus_tag="VLJ38_00525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38005.1"
                     /translation="MLASVELGGGRVLWAGRRGERWLFDPETKRLATALPAPEDLVAV
                     TSDPGGGHWFVGRSGTSYHAASPLGPFIDVTVPLEPLAQVSAAGRTLLGVGRDERLSR
                     SVDDGRTWTPAGPADTSFVDVAIDAHGQALALASPEALFQSDNGGATFRRSELPPSGA
                     LSLVPEPNGDGIHVVSLLGSSHFGAGSAAAGSAVPLLEDVMHRGVPLPLGEDAGSLMG
                     DNAVLGGGEYLEIRSFGEGKREWAVVSGPFGGPLAWRPLAEAKGCGSVRLGSFERFAY
                     FACFRATPAATQRVELFASTDAGRSFARVAPDFWGRLARVRLAVGRGGALLVTGACPP
                     NVEGPGCAPAGILYRRAVVNQRAAKDAHGEQSAESGFEFALAAVPSLAESGNVELTFD
                     TDGRAAFALGGSTKSTSLSLFVSKDGGQTFEPHDLGDSTRDQDTETGVPFTPGRDGTL
                     SLVLGGRRGTSSLVVVDAEGRVLRTGTAPERGLLGAAGLSALAIGAESGAVVESLDGG
                     VSWQSRGKLPVPPCPGDASCDVPVVCSSDGCVIGDEFTRVGWGASDEAAPEAYAPVEA
                     EGEAGLERRLQTPLACALAPGGWHVLAGVR"
     gene            complement(1970..2293)
                     /gene="trxA"
                     /locus_tag="VLJ38_00530"
     CDS             complement(1970..2293)
                     /gene="trxA"
                     /locus_tag="VLJ38_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HSU38006.1"
                     /translation="MASEKIHVFNDLNFDTEVLASGVPVLVDFTATWCGPCKALSPIV
                     DQIATELDGKVKVGKVDVDDSPLTAGKYGVRGVPTIMVFKNGQRAAQHVGLTTKQKLL
                     ALVEG"
     gene            2377..3144
                     /locus_tag="VLJ38_00535"
     CDS             2377..3144
                     /locus_tag="VLJ38_00535"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HSU38007.1"
                     /translation="MSESHDFSSSSAAPALLTSALLTAERPALPQGYTPEQVIAALEP
                     LSEDRRKARILDVVRQRVGSVTVLLDMPRDPHNGAAVVRSADAFGVPEVHVVQRDPTF
                     FVGHRVAQGTERWVEVVQHQAAEDAVTALRARGFRLIATHPNGALVPEDLRNLERVCL
                     LLGNEHDGISEALARAADASVRIPMRGFVESLNLSVAAAVLLNAALAGRPGDLSSAEV
                     RRWYAAGLVRSVPRSAEILAALREEGCPRDKLGTPET"
     gene            3228..3587
                     /locus_tag="VLJ38_00540"
     CDS             3228..3587
                     /locus_tag="VLJ38_00540"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSU38008.1"
                     /translation="MLRHNSEGSVLGPATRITGRISGDGAIRVEGGVKGDVNVSGPAE
                     IAEGASVEGTVHAESLEISGSLLGDAVTRGPIAVRAGALVRGDLRGSEISIEPGSRVS
                     VRLDTQIELDLGAPRRR"
     gene            3618..3932
                     /locus_tag="VLJ38_00545"
     CDS             3618..3932
                     /locus_tag="VLJ38_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSU38009.1"
                     /translation="MAGTVIGEGLNIEGDLSSEEEVVVQGNLRGKLTTTDAVSVGSSA
                     VIEADVSAQSLTIAGQVTGDVTAAERVDLQAGGRLIGDVKASRLTIADGASFKGNVDM
                     DV"
     gene            3944..>4134
                     /locus_tag="VLJ38_00550"
     CDS             3944..>4134
                     /locus_tag="VLJ38_00550"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSU38010.1"
                     /translation="MNGSVIGRGTVVRGNVRGSGSLEILGRVEGDVSVTGEVVLGEES
                     AVRGSVTGSHITVSGAVQG"
BASE COUNT          679 a         1437 c         1440 g          578 t
ORIGIN      
        1 tcacgaaccc cagcgagtac gtgccatccg cccggagcga gggcgcaggc gagcggcgtc
       61 tgcagccgtc gttcgagacc cgcctcgccc tcggcctcga ccggcgcgta cgcttcgggc
      121 gcggcttcgt cgctcgcccc ccagccgacc cgcgtgaact cgtcgccgat gacgcagccg
      181 tcgctcgagc aaacgaccgg cacgtcacag ctcgcgtcgc cgggacacgg cggcacgggg
      241 agcttgccgc gcgactgcca gctcaccccg ccgtcgaggg attcgaccac ggctccgctc
      301 tcggcgccga tcgcgagcgc cgagagtccg gcggcgccga gcagaccgcg ttccggcgcc
      361 gttcccgtgc ggagcacgcg cccttcggca tcgacgacga cgagcgagga cgttccacgt
      421 ctgccgccga ggacgagtga gagcgtcccg tcgcggcccg gcgtgaacgg cacgcccgtc
      481 tccgtgtcct gatcgcgcgt gctgtcaccg aggtcgtgcg gctcgaacgt ttggccgccg
      541 tccttcgaca cgaacagcga gagcgacgtg gacttcgtgc tgccgccgag cgcgaaggcc
      601 gcgcgaccgt ccgtgtcgaa cgtgagctcg acgttgccgc tctcagcgag cgacggtacg
      661 gcggccaggg cgaattcgaa gccggactcg gcgctctgct ccccgtgggc gtccttggcg
      721 gcgcgctggt tcacgaccgc gcgccggtaa agaatgccgg cgggcgcgca gccaggcccc
      781 tcgacgttcg gcggacaagc accggtcacg agcagtgcgc ctccgcggcc gacggcaaga
      841 cggacacgcg cgagcctgcc ccaaaagtcc ggcgccacgc gcgcgaagga acgaccggcg
      901 tcggtgctcg cgaaaagctc gacccgctgc gttgcggcgg gggtcgcgcg gaagcacgca
      961 aagtaggcaa agcgttcgaa gcttccgagc ctgaccgagc cgcaaccctt ggcttcggcg
     1021 agtggtcgcc aagccagcgg ccccccgaac ggcccggaca cgaccgccca ctcgcgcttg
     1081 ccctcaccaa atgaacggat ctcgaggtac tcgccgccgc cgagcacggc attgtctccc
     1141 atgagcgagc ccgcgtcttc gccgagcggc agcggcacgc cacggtgcat cacgtcctcg
     1201 agcagcggca ctgccgaacc ggccgctgcg gaacccgccc cgaaatgact cgagccgagc
     1261 aagctgacga cgtggatacc gtcgccgttc ggctccggta cgagcgacag cgcgccgctc
     1321 ggcgggagct cgctgcgacg aaacgtcgcg ccgccgttgt cactctgaaa tagcgcttcc
     1381 ggcgacgcga gcgcgagcgc ttggccgtgc gcgtcgatgg cgacgtcgac gaacgaggtg
     1441 tccgcgggcc ccgccggcgt ccaggtccga ccgtcgtcga cgctgcgcga caagcgttcg
     1501 tcgcgtccga cgccgagcag agtgcgtccg gccgccgaga cttgagcgag gggctcgagc
     1561 gggaccgtca cgtcgatgaa cggcccgagc ggggaagccg cgtggtagct cgtccccgaa
     1621 cggccgacga accaatgccc gcccccggga tcgctcgtca ccgccacgag atcctcgggc
     1681 gcgggcaggg ccgtcgccag gcgcttggtc tcggggtcga acagccagcg ctcaccacgc
     1741 cggcccgccc aaagcacgcg gccgcctccg agctcgacgg aggcgagcat cggggcggcc
     1801 gaatgtgggt gataccgaaa gcctgccgca accccccgcg ccgagcgcgt ctcgctcgtc
     1861 gggcgcggca actcgggtgc ggggcgagac ccggcgcaac cagcgagcaa gctcgctagc
     1921 gcccaggcag tgatgcgacc ggccaaggac ctacccggtc gggcgaaact caaccctcga
     1981 cgagcgcgag gagcttctgc ttggtggtga ggccgacgtg ctgagccgcg cgctggccgt
     2041 ttttgaacac catgatggtc ggtacgccgc ggacgccgta cttgccggcg gtgagcggcg
     2101 agtcgtcgac gtcgaccttg ccgactttca cctttccgtc gagctccgtc gcgatttgat
     2161 cgacgatagg agacagcgcc ttgcaggggc cacaccaggt cgcggtgaaa tcgacgagaa
     2221 cgggcacgcc cgaggcgagc acctccgtgt cgaagttgag gtcgttgaac acgtggatct
     2281 tttccgatgc catggggccg tctccagaat tccttacaac ataatgccac ccccgcgcta
     2341 agcaaccccc gcgagttctg gcgtatccgc gaagccatgt ccgagagtca cgacttttct
     2401 tcgtcttccg ctgctcccgc gctcctcacc tcggcgctcc taacggccga gcgcccggcg
     2461 ctgccccaag gctacacccc tgagcaggtg atcgccgcgc tcgagccgct ctcggaggac
     2521 cggcgcaagg ccaggatttt ggatgtggtc cggcaacgcg tcggcagcgt cacggtgctg
     2581 ctggacatgc cgcgcgatcc gcacaacggc gcggcggtcg tgcgctccgc cgacgcgttc
     2641 ggcgtccccg aggtccatgt ggtgcaacgt gatccgacgt tcttcgtggg ccatcgggtg
     2701 gcgcagggga ccgagcgctg ggtggaggtc gtccagcacc aggccgccga ggacgcggtc
     2761 acggcgctgc gcgctcgcgg ctttcgcttg atcgcgacgc atccgaacgg cgcgctcgta
     2821 ccggaagatc tgcgcaacct agagcgggtg tgtctcttgc tcggcaacga gcacgacggc
     2881 atcagcgaag cgctcgcgcg agcagccgac gcgagcgtgc gcatccccat gcgtggcttc
     2941 gtcgaaagtt tgaacctcag cgtcgccgcg gccgtgctgc tgaacgccgc cctcgccggg
     3001 cgtccaggcg acctctcctc cgccgaagtg cgccgctggt acgcggccgg tctcgtgcgc
     3061 tccgtcccgc gctcggccga aatcctcgcc gcgctacgcg aagaggggtg tccacgagac
     3121 aagctcggaa cccccgaaac gtgagggttt gcgcgccgcg agacgcttcg ttttttagac
     3181 tggggcaaac tggcggctag tgctagcgtc gcccgccgaa tcgcaaaatg ctgaggcaca
     3241 attcggaagg cagcgtgctc gggcccgcca cccgcatcac cggtaggatc agcggcgacg
     3301 gcgcgatccg cgtggaaggc ggagtgaagg gcgacgtgaa cgtgagcggc cccgcggaaa
     3361 tcgccgaggg cgcgagcgtc gaaggcaccg tccacgccga aagcctcgag atctcgggct
     3421 cgctgctcgg cgacgccgtg acgcgcgggc ccatcgccgt gcgagcaggc gccttggtgc
     3481 gcggtgacct ccggggcagc gaaatttcca tcgagccggg ctcgcgcgtg tcggtgcgac
     3541 tcgacaccca gatcgagctc gatctcggcg cgccgcgacg gcgctaagcc acccacgcag
     3601 agcaaagagg atttcccatg gcaggcacgg tgatcggtga agggctcaac atcgaaggcg
     3661 atctgagcag cgaagaagag gtcgtggtgc agggcaacct gcgcggcaag ctcacgacga
     3721 cggacgccgt gtccgtcggt agctccgccg tcatcgaagc ggacgtgagc gcgcagagcc
     3781 tcacgatcgc cgggcaagtg acgggcgacg tgactgcggc cgaacgcgtc gatctgcagg
     3841 cgggcgggcg cctgatcggc gacgtgaaag cctcgcgcct gaccatcgcc gacggagcct
     3901 cgttcaaggg caacgtcgat atggacgtgt gagcggagcg gcgatgaacg gctccgtcat
     3961 cggtcgtgga acggtcgtgc gcggcaacgt gcgcggcagc ggcagtctcg aaatcctggg
     4021 ccgcgtcgaa ggcgacgtga gcgtcacggg cgaagtcgtg ctcggcgaag agagcgcggt
     4081 gcgcggaagt gtgacggggt cgcacatcac cgtctcgggc gccgtgcagg gcga
//
LOCUS       DATIML010000037         1960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3184096, whole genome shotgun sequence.
ACCESSION   DATIML010000037 DATIML010000000
VERSION     DATIML010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3184096"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VLJ38_00555"
     CDS             complement(<1..253)
                     /locus_tag="VLJ38_00555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38011.1"
                     /translation="MTSVAACSAGAGGKNPGLTDDGGTSATGGSGGGVTATGGSGATG
                     GSSALGGSSMIELGGSSGDSAGTAGGDKCNPLMATSTQLT"
     gene            complement(485..1801)
                     /locus_tag="VLJ38_00560"
     CDS             complement(485..1801)
                     /locus_tag="VLJ38_00560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HSU38012.1"
                     /translation="MKKTYVLDTNVLLHDPHAIRKFEDNDLILPIYVIEEIDQFKRES
                     NERGRNARTIVRLLDALRESGGSLAQGVPVGDGGTLRVFVPDKRPELAIALNPSSGDH
                     AIISTALLLRDAKPDQPTIFVTMDVNLRIQADALGLVTEAYENQAVDFERLETGIVEL
                     PVSSEDFDRFFQEGAIAAPSGERLYANLSVMLRDDGARPRTALGRYHADKSEIRALKT
                     SRDPISGIKARNREQAFALDLLLDENIKLVTLIGKAGTGKTLLALAAGVKRTIEEGAY
                     SRLLVSRPVMPLGRDIGFLPGDLDQKLNPWMQPIYDNLEFLLVAGGKRRGMRGFEDPF
                     ASGQLQVEPLTYIRGRSLPGQYVIVDEAQNLTPHEVKTVITRCGEGTKIVLTGDPFQI
                     DNPYVDAATNGLSFCSDRLRGESMVGHIVLSKGERSELANVAANKL"
BASE COUNT          311 a          592 c          700 g          357 t
ORIGIN      
        1 aggtgagctg cgtcgacgtt gccatcagag ggttgcactt gtccccgccc gccgtcccgg
       61 cgctgtcgcc gctcgagccg ccgagctcga tcatgctgct gccgcccaag gcgctcgagc
      121 cgccggtcgc gcccgagccg ccggtggccg tcacgccgcc cccgctgccg cccgtggcgg
      181 aagtgccgcc gtcgtccgtg agtccggggt tcttgcctcc ggcgcccgcg ctgcacgcgg
      241 cgacagatgt caaaagtagc ggagccaaac tgaagaaagt gcgaagtctc gtcatttctg
      301 ccaatcgaac gcgaaagaaa gttacgagac tgaagcgtag cccgagcggg cgatgcgaac
      361 aaatcgcgcg ctaccacccc ctgagcgcgc gaatgcgcgc gatttggggg tggtcgaccg
      421 cgcggagccc gaaagggcga gcacgggcgg gtcgggggca gccccttcag ctggaatcgg
      481 tgggctaaag cttgttggcc gcgacgttgg cgagctcgct gcgctcgcct ttgctgagaa
      541 cgatgtggcc gaccatggat tcgccgcgca agcggtcgga gcagaaactc aggccgttcg
      601 tggcggcatc gacgtaggga ttgtcgattt ggaaggggtc gcccgtgagc acgattttgg
      661 tgccctcgcc gcagcgcgtg atgacggttt tgacttcgtg cggcgtgagg ttctgcgctt
      721 cgtcgacgat gacgtactgg ccgggcaggc tgcggccgcg gatgtaggtg agcggctcga
      781 cctggagctg gccgctcgcg aagggatcct cgaagccgcg catgccgcgg cgtttgccgc
      841 ccgcgacgag caaaaactcg aggttatcgt agatgggctg catccaggga ttgagttttt
      901 ggtcgaggtc gcccggcaaa aagccgatgt cgcggccgag cggcatgacg gggcggctca
      961 cgagcaggcg tgagtaggcg ccctcttcga tggtgcgctt cacgccggcg gcgagcgcga
     1021 gcagggtctt gccggtgccc gccttgccga tcagcgtcac gagcttgatg ttctcgtcga
     1081 gcaagagatc gagcgcgaag gcttgctcgc gattgcgcgc tttgatgccg gagatgggat
     1141 cgcgcgaggt cttgagcgcg cggatttcgc tcttgtcggc gtggtagcgg ccgagcgccg
     1201 tgcgcggcct ggcgccgtcg tcgcggagca tgaccgacag gttcgcgtac agccgctcgc
     1261 cgctcggcgc cgcgatggcg ccttcctgaa agaagcggtc gaagtcttcg ctgctgacgg
     1321 gcagctcgac gatgcccgtc tcgaggcgct cgaaatcgac ggcttggttt tcgtacgcct
     1381 cggtgacgag accgagcgcg tccgcttgga tgcgcaggtt cacgtccatc gtgacgaaga
     1441 tggtcggctg atccggcttc gcgtcgcgca ggaggagcgc tgtcgagatg atggcgtgat
     1501 cgcccgagct cggattgagc gcgatggcga gctcgggtcg cttgtcgggc acgaagacgc
     1561 gcagggtgcc gccatcgccc acggggacgc cctgcgcgag cgagccgccg ctttcacgca
     1621 gcgcgtcgag caagcgcacg atcgtgcggg cgttgcggcc gcgttcgttc gactcgcgct
     1681 tgaattgatc gatctcctcg atcacgtaaa tcgggaggat gagatcgttg tcctcgaatt
     1741 tccggatggc gtgcgggtcg tggagtagga cgttggtgtc gaggacgtag gtcttcttca
     1801 tcggaacgag cccgagggcg agcttttccc gccaaccgga ggggtccgcg gataccgctt
     1861 cgctcctccc ccggcaattg aataaccgcg tgcctagctt agcttccgag aagcagaggg
     1921 attttcgccg cgcggcaggc cctcagagtc ttggaagaac
//
LOCUS       DATIML010000038         2231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4050120, whole genome shotgun sequence.
ACCESSION   DATIML010000038 DATIML010000000
VERSION     DATIML010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4050120"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1571
                     /locus_tag="VLJ38_00565"
     CDS             <1..1571
                     /locus_tag="VLJ38_00565"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38013.1"
                     /translation="GTSLYLAWMAVGRLCYEAEAYPEAAEAYSHVSRQSPEFPTMLHE
                     LAWVYVRVGDFQRAQRALEVLSIADPNNLDIADGSLLRADLLLRSGEFDKALTLYRSV
                     RGRFDPIRDQVDHFIQTTADPASYYDRLTADPDVQTDDKLPPLALAWAREQAEDQNVF
                     GVIDDVNRSRDLVKQSRRLASRLNGVLAVPTRAKAFPEIRAALEHTISLTNKLGKARL
                     SLAQGIDEKAGDVSGELASVRQERRSLQKKMLGLPVTSAEFAERDDAGVRQWNTVSQS
                     LQQLTVEADKLRAMVNALKRVLKQGDNLGVTSDAATRERFRLEIDANERDLEGYEQRI
                     AQYREAIENGRVQSGFGDQRYIDDDTARRRFRDLLNREAALCAAGQDADAAEFARSIQ
                     PILARADAIDLRLEGNRAELERQATAQAEVLRAKIGEELATVETRSAALDQVDQEARL
                     LVGQVAMKAFAAVRERLKGIVLRADVGIVQEAWEEREEQGLRVRQLQRERAHEEQMLN
                     DELREVLEDAEEEQ"
     gene            complement(1657..1941)
                     /locus_tag="VLJ38_00570"
     CDS             complement(1657..1941)
                     /locus_tag="VLJ38_00570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38014.1"
                     /translation="MSWAGVGAGRGVTCVRARAGSVEPDRVGEALGAAVAAAAEEAEA
                     LAAGALAAELAPVADALALALPAGAEDALVLPLLAGDPELAGAADAAPAG"
     gene            1955..>2231
                     /locus_tag="VLJ38_00575"
     CDS             1955..>2231
                     /locus_tag="VLJ38_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38015.1"
                     /translation="MSDEVRQYEKDSKDYRRLLTMIVRHHYESRRKQVLAGLDRDIQV
                     EKYGLVNARNEAISRLEDFVAHYSGANSDEKASPDAMFRLAALYEERA"
BASE COUNT          384 a          761 c          780 g          306 t
ORIGIN      
        1 caggcacgtc gttgtacctc gcgtggatgg cggtcgggcg gctctgctac gaagccgagg
       61 cgtaccccga agcggccgag gcctacagcc acgtgtcgcg ccagtcgccc gagtttccca
      121 cgatgctcca cgagctcgcg tgggtgtacg tgcgcgtcgg cgattttcag cgcgcccagc
      181 gcgcgctcga agtgctgagc atcgcggacc cgaacaatct cgacatcgcc gacgggtcgc
      241 ttttgcgcgc cgatctcttg ctgcgctcgg gggaattcga caaagcgctc acgctgtacc
      301 gctcggtacg cggacgcttc gatcccatcc gtgatcaggt cgatcacttc atccagacga
      361 cggctgaccc ggcttcgtac tacgaccgct tgacggccga tcccgacgtc cagaccgacg
      421 acaagctgcc gccgctcgcg ctcgcgtggg cgcgcgagca agcggaggat cagaacgtgt
      481 tcggcgtcat cgacgacgtg aaccgctcgc gcgacctcgt gaaacagagt cggcgcctcg
      541 cctcgcgcct gaacggcgtg ctggccgtac cgacgcgcgc caaggcgttc ccggagatcc
      601 gcgcggcgct cgagcacacc atcagcctga cgaacaagct cggcaaggcg cggctgagcc
      661 tcgcgcaagg catcgacgag aaggcgggcg acgtgagcgg ggagctcgcg tccgtgcgcc
      721 aagagcggcg ttcgctgcag aagaagatgc tcggcctgcc cgtcacgtcc gccgagttcg
      781 ccgagcgcga cgacgcgggc gtgcggcagt ggaacaccgt gtcgcagtcg ctgcagcagc
      841 tgacggtgga agcggacaag ctgcgcgcca tggtgaacgc gctcaaacgc gtgctcaagc
      901 agggcgacaa cctgggcgtc acgtccgacg ctgcgacgcg cgagcgcttt cggctggaga
      961 tcgacgcgaa cgagcgcgac ctcgagggct atgagcagcg catcgcgcag taccgcgagg
     1021 cgatcgagaa cgggcgcgtg cagtcgggct tcggcgatca gcgctacatc gacgacgaca
     1081 ccgcacggcg acgcttccgc gatctgttga accgcgaggc ggcgctctgc gctgccggac
     1141 aagacgccga cgccgcggaa ttcgcgcgct cgatccagcc catcctcgcg cgcgccgacg
     1201 ccatcgacct gcgactcgag ggcaatcgcg ccgagctcga gcggcaggcg acggcccagg
     1261 ccgaggtgct gcgcgcgaag atcggcgagg agctcgcgac cgtggagacg cgctccgccg
     1321 cgctcgatca agtggatcag gaagcgcggc tgctcgtcgg tcaggtggcg atgaaggcct
     1381 tcgccgccgt gcgcgaacgc ttgaaaggta tcgtgctgcg cgccgacgtg ggtatcgtcc
     1441 aggaagcgtg ggaggagcgc gaggagcagg ggctgcgcgt gcggcagctc cagcgcgaac
     1501 gcgcgcatga agagcagatg ttaaacgacg agctccgaga ggtgctcgag gacgcggagg
     1561 aggagcagtg aggcggctta cgtcgtcggt tgcctacagt gggctttttg cgttcggtct
     1621 tttgtgcgtc gtcgcaccgg ccgggtcgca gccgtctcag ccggcggggg cggcgtcggc
     1681 cgcgcctgcg agctcggggt cgcccgcgag cagcggcaaa acgagcgcgt cctcggcacc
     1741 cgcgggcagc gccaaggcga gcgcgtccgc cacgggcgcg agctccgcgg cgagtgcgcc
     1801 ggccgcgagc gcctccgctt cctcggccgc agcggcaacg gctgcgccga gcgcctcgcc
     1861 gactctatcg ggctcgacgc tccccgcccg cgcgcgcacg caggtgacgc cgcggcccgc
     1921 gccgacgccg gcccagctca agacctatca gatcatgagc gacgaggtcc ggcagtacga
     1981 gaaggactcg aaggactacc gccgcctgct caccatgatc gtgcggcacc actacgagag
     2041 ccgccgcaag caggtgctcg ccgggctcga ccgcgacatc caggtcgaaa aatacggtct
     2101 cgtgaacgcg cgcaacgagg ccatctcgcg cctcgaagat ttcgtcgcgc actacagcgg
     2161 cgcaaactcg gacgagaaag cgtcgccaga cgcgatgttc cgcctcgcag ccctctatga
     2221 agagcgcgcc c
//
LOCUS       DATIML010000039         4110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1740793, whole genome shotgun sequence.
ACCESSION   DATIML010000039 DATIML010000000
VERSION     DATIML010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1740793"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..1254)
                     /locus_tag="VLJ38_00580"
     CDS             complement(88..1254)
                     /locus_tag="VLJ38_00580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38016.1"
                     /translation="MPKVEFVTATCLVLGALALGPSAHAASEAPALPAARFDVTPRHE
                     DAQNLRAEAQAIALRWAPIFAQETSADHPERDRPLPIDFDGDWDATNDWSHLTPAAAR
                     SPAVVYSSAILSATHAFLTFTLFYPRDWVSYGCVPYVCHDNDLEVALLVIDRRRAEQP
                     DGLVLVETKTHNRYLATPGRDVARAGALRPIIHAESQGHGLESVQLGAERDGDSRVFA
                     PAGTTWRSEQRQRGASEDYALLSLHDTLWARRQPNATSGRLWQAGESGWLFYTGERAG
                     RRGRVLGASMAGKEYPGGVRPPWALKATAERGDWFLDPAFATLERHARWFAAPASLDY
                     ELNPYLDELSAECVRGECAPAPPVPATFGSSSVALGFFMSFGMTSRLRRRRRAR"
     gene            complement(1272..1628)
                     /locus_tag="VLJ38_00585"
     CDS             complement(1272..1628)
                     /locus_tag="VLJ38_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38017.1"
                     /translation="MPPPVVKKEPRLLGIRLPAFIALSVSGLGAGGAVVTRIASNWPS
                     ADLKGGCAGHCSDGAHTLQTTSTILTGIAVAAAGTGVVLALSNPGHARKNLASLPVLG
                     MSVSPSKAAASASWTF"
     gene            2754..>4110
                     /locus_tag="VLJ38_00590"
     CDS             2754..>4110
                     /locus_tag="VLJ38_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38018.1"
                     /translation="MTLVSRPCGAETLEAPVGGKAISLGRGRIACEKPGGGWTAVRTG
                     LAVRPPDNDQAVGQSVELRVSGERGGCANGSTVTLLAVGEAPTFDLPTSVLDVDAGTV
                     EIHGRGLRGVGLSWRARSASGADVCRDPKPAGASKRCVWSVAHDMPADPRAVELSWFP
                     PGGRQGPEVTVYDGDGRPLGPDAFTLTPALVVISHVLSADAAVDLSTGLGEVPLVHPE
                     AVSAVECTGATCTLANGKLVVRAATSLVNSVDVKVTLAPGVAFKQEDRLEPHPTLKLS
                     VLHCPLSFASGPPLRAVEGALTVVKFEGRCAAEAEALHFLEGTRPVETVRTETEGQTA
                     WVVLRLGRITANEVTITALRGGTADIPVATAKTLTRAAPDVRSVLEIPGLPPLSFIPS
                     NRGAVVHVGMPGWGATLVLLPLEGVYTTENVGRSTLIVGDEFAAGVATLRYGYRGLAL
                     PE"
BASE COUNT          660 a         1364 c         1444 g          642 t
ORIGIN      
        1 gcacgaacca gaagtacggg atgatcacga tgtgcgtcgg tacgggaatg ggcgcggccg
       61 ccatcctcga acgcgtgtga ccacgagcta acgtgcgcgc cggcgccggc gcaggcgcga
      121 ggtcatgccg aagctcatga aaaatccgag cgccaccgat gacgagccga acgtcgccgg
      181 gacgggcggc gcgggggcgc actcgccgcg cacgcactcg gcgctgagct cgtcgaggta
      241 agggttgagc tcgtaatcga gactcgcggg cgcggcgaac cagcgcgcgt gacgctcgag
      301 cgtcgcgaac gccggatcca agaaccaatc gccacgctcg gccgtcgctt tgagcgccca
      361 gggcggtcgc acgccacccg gatattcctt gccggccatg gaggcgccca gcacgcggcc
      421 gcgccgtcca gctcgctcgc ccgtgtaaaa tagccagccg ctttcgcctg cttgccagag
      481 ccggccgctc gttgcgttcg gctgccggcg cgcccagagc gtgtcgtgga gcgaaagcag
      541 cgcgtaatct tcgctggcgc cgcgctgacg ctgctcgctc cgccaagtgg tgcctgcggg
      601 tgcaaacacg cgggaatcgc cgtcgcgctc cgcgccaagt tggacgcttt cgaggccgtg
      661 tccctgcgac tcggcgtgga tgatcgggcg cagcgcgccg gcacgtgcca cgtcgcggcc
      721 gggcgtcgcc aggtaccgat tgtgcgtctt ggtttcgacc agcacgaggc cgtcgggttg
      781 ctccgcgcgc cggcgatcga tgacgagcaa cgcgacttcg aggtcgttgt cgtgacagac
      841 gtacggaacg caaccgtagg aaacccaatc gcgcgggtaa aacagcgtga aagtcagaaa
      901 cgcgtgggtc gcgctcagga tcgccgagct gtaaaccacc gccggggagc gcgccgcggc
      961 gggggtcagg tgggaccaat cgttggtcgc gtcccaatcg ccgtcgaaat cgatcggcag
     1021 cgggcgatcc cgctccgggt ggtcggcgga cgtctcttgc gcgaagatgg gagcccagcg
     1081 cagcgcgatg gcctgcgctt cggcgcgcag gttttgcgcg tcctcgtggc gaggcgtgac
     1141 gtcgaagcgg gccgcgggca gcgctggagc ctcggacgcg gcgtgtgcgg acgggccgag
     1201 cgccagcgcg ccgaggacca ggcacgtcgc ggtcacgaac tcgactttcg gcacggctcg
     1261 ctcgacgaac gtcagaaggt ccaggacgcg ctcgccgcgg ccttactcgg cgaaacgctc
     1321 atgcccaaga cgggcagcga ggcgagattt ttacgggcgt gtccgggatt ggagagcgcg
     1381 agcacgacgc ccgtgcccgc tgccgcgact gcgatgccgg tgagaatcgt gctggtcgtt
     1441 tggagcgtgt gcgccccgtc cgaacagtgc ccggcgcagc cacccttgag atcggccgac
     1501 ggccaattcg aggcgatgcg cgtgacgacg gcaccgcccg cgccgagacc actgacgctc
     1561 agagcgatga aggctggcaa gcggatgccg agcaagcgcg gctccttctt cacgacggga
     1621 ggcggcacgg gttttacgtc cgcttgcggc agcgcagcgg aggcgggctc tggcgccggc
     1681 tgttcagaat tcggagcgac gcccacttgc gctcgagaat cagccgcccc agatacatcg
     1741 acgcgaggcg cagactcggt cggcgcggcg acgggctcgg aggcctcggc ggatttcgca
     1801 gcggaatcgc agaccggtgg agtggcgggt tcttcggctg ccaccgacgg agcgatgcac
     1861 ttggcgagca ccacgagggc cgcggagtga gtcttacgca cgagcactcg acgcgctcga
     1921 atccagagtg agatagtgct caatcagttc gtcgtcagca gccctagcga ctgcctttcg
     1981 atgaatagag tagcatcggt cgacgcgaag caggcgtgac tttgcacccc gcgcgcgaat
     2041 ttcctgcgca cgatgtggga cacgtcgtgt actcgaacac aagcgtgctc acgcgctgcc
     2101 tcactttggt gcagcggtcg acgcgctgac ctcggtccgc gacgcgaaac gtttcgcgca
     2161 acatgtgtgc gacgcgtcac ggaacaccga gcgtgcaacc ttcaagctgc acgtgaaaaa
     2221 ctagaaccaa ctcgttcctg gggctcgtcg cgctcgcggc aacgaccccg cagcgggtac
     2281 cgggtcctcg agccgcgtct gaacgttgtc gtcgaaaaac ttcatggaag ccgctgcctc
     2341 cggcggcagg gtgcgtcagc gtcggcgcgc tgcgacgccg gccgtattgg accgcgaggc
     2401 gtcgagcccg gaacgaggac agcagtccag gctggtgatg ttcaacagca aggagcagtg
     2461 acgtgctccg cggacgcgag cttgttcgtt tgggttcaaa ccattttgaa cgagtcggac
     2521 acccggccac ttccgtggcc gctctggttt tgcaaactgt cgcacctctc tagcggggta
     2581 taccggcgaa ctcgcggcgc accgagctct cgaaatgcgg cgtggcgcgc acgaacacgc
     2641 gcggacttgc gttctcgtgc cattgcgcga cagtcgtacg agtgcccctc gcgtgtccct
     2701 cgagcaggcc gccgtgcgct ctcggcgtcg tcgcgctggc actgctggcc ctcttgacgc
     2761 tcgtcagtcg cccgtgcggg gccgagacgc tggaggcgcc cgtaggcggc aaggccatct
     2821 cgctcggacg tggccgcatc gcctgcgaga agccgggcgg cggctggaca gccgtcagga
     2881 cgggcctcgc cgtcaggcca ccggacaacg atcaagcagt cggtcagtcc gtcgagctac
     2941 gagtttcggg cgagcgaggc ggctgcgcga acggttcgac cgtcacgctc ctagccgtcg
     3001 gcgaggcacc gacgttcgac cttcccacga gcgtcctgga cgtggacgcg gggaccgtcg
     3061 agatccacgg ccgcggcttg cgcggcgtcg gcttgagctg gcgggcgcgc tcggcgtccg
     3121 gggcggacgt gtgccgcgat ccgaagcccg ccggtgcctc gaagcgctgc gtttggtcgg
     3181 tcgcgcacga catgcctgcc gatcctcgcg cggtcgagct ctcgtggttt ccgcccggcg
     3241 gacggcaggg accggaagtg acggtgtacg acggcgacgg tcgccccctc ggtcccgacg
     3301 cgttcaccct caccccagcg ctcgtggtca tctcacacgt gctgtcggct gatgccgccg
     3361 tcgatttatc aaccggactg ggcgaagtac cgctcgtgca tcccgaggcg gtgagcgccg
     3421 tcgaatgcac gggggcgacg tgcacgctcg cgaacggcaa gctcgtggtg cgggcggcga
     3481 cgagcctcgt caattcagtg gacgtgaagg tgacgctcgc gccgggcgtc gcgttcaagc
     3541 aggaggatcg gctcgagccg cacccgaccc tgaagctgtc ggtgcttcac tgcccgctgt
     3601 ccttcgcgtc cgggccgccg ctccgcgccg tcgaaggcgc gctcacggtc gtgaagttcg
     3661 aggggcgctg cgccgccgaa gccgaagccc tgcattttct cgaaggtacc cgtccggtcg
     3721 agaccgtgcg caccgagacc gaaggccaaa cggcgtgggt cgtgttgcgg ctcgggcgca
     3781 tcacggccaa tgaagtgacg atcacggcgc tgcgtggcgg gacggccgac atccccgtcg
     3841 cgaccgcgaa gaccctgacg cgcgccgcgc ccgacgtacg ttccgtgctc gagatccccg
     3901 gcctgccgcc gctctcgttc attccgagca atcgcggcgc cgtcgtgcac gtgggcatgc
     3961 ccggctgggg cgccacactc gtgctcctgc cgttagaggg cgtgtacacg accgaaaacg
     4021 tcggcaggag taccctcatc gtcggtgacg aattcgccgc cggcgtggcg acgctgcggt
     4081 acggctatcg cgggctcgcg ctgcccgagc
//
LOCUS       DATIML010000040         4003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3762023, whole genome shotgun sequence.
ACCESSION   DATIML010000040 DATIML010000000
VERSION     DATIML010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3762023"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            366..1031
                     /locus_tag="VLJ38_00595"
     CDS             366..1031
                     /locus_tag="VLJ38_00595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38019.1"
                     /translation="MSLPLSCGGDDDDTAPSAGKSGSAGKGGSAGKGGSSGAATAGKG
                     GSAGKGGTGGTAGGGATAGTGATGGTTAGRGGTGGTGGTGTSGGGAGGEPAGAGGVEQ
                     AGAGQGGADQGGAGQGGAPATDPDAATRLAAAQSICAKPASSSNTSCGNETACVAYYT
                     NTAGFDEACTTNLTSMLTCLEPQPASDFNCGPSYIAVDGAASAGSCYELWHTWQYCPG
                     VVK"
     gene            complement(1207..1620)
                     /locus_tag="VLJ38_00600"
     CDS             complement(1207..1620)
                     /locus_tag="VLJ38_00600"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HSU38020.1"
                     /translation="MSAEASDHLASIRDALAQLPGVELALLFGSRATGRAGPNSDLDL
                     AVEAPGVDLFALAGDLSAKLGIEVDVTALADASVPLLHQLVRDSTVVYERVHGRAASW
                     RVRALCELETDLPWFRRMRDAWLTRVSEHGFADGR"
     gene            complement(1672..2688)
                     /locus_tag="VLJ38_00605"
     CDS             complement(1672..2688)
                     /locus_tag="VLJ38_00605"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HSU38021.1"
                     /translation="MLRRTFEGPFASSCVLALAVTFSAGFARAGETPPADSAAPAAAA
                     PTEAAIREASEHYEAGLALYADGEFKRAAIEFDRAYELVPNYRALYNIGQVRIQLHDY
                     ARAFKALQAYLKEGGDKIDADRRKSVNDDIEMLSTRTATLAIDCNEAGADILVDGELA
                     GTTPLPEPLLLDTGDHRIIVRKEGFDPRETPLTLASRDTQSLRVDLQRTPPDRGPVVV
                     VAPQAQSDRTAWIWGTWSATAAFAAGAAVTGGLGIGAANDLDHLRSTYGSSRAELDSA
                     GSRATTLLRAADVLGAAAIVTGGIALYLTLSRPPTTKDEEKKAAPQASVRVGPSSVSF
                     STTF"
     gene            2902..3498
                     /locus_tag="VLJ38_00610"
     CDS             2902..3498
                     /locus_tag="VLJ38_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38022.1"
                     /translation="MRTFRFVVLTSLLLSACGGSSGDHSNDPAVQSTADAERAYVGLD
                     ASIDKAITLGFDGFNAATNANIAPQTATGDDKGTLTVSGQVDQGSSSNKTMHLTEALA
                     TYSDDGQLAYATDDAALPALEMKLTKVPTGTLDGTLNGSFKIDGKLKGSVTLALTFSG
                     ELQANADDPTQVERKPGTTHITGTATSGNDTYTVDVTR"
     gene            complement(3530..>4003)
                     /locus_tag="VLJ38_00615"
     CDS             complement(3530..>4003)
                     /locus_tag="VLJ38_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family substrate-binding domain-containing
                     protein"
                     /protein_id="HSU38023.1"
                     /translation="DVGFVRGPLSDKALTAECVRREPLVVGLPADHPLAGIGPLRLET
                     LASEPFVFFPRPRAPAFFDLLIALCQRAGFTPRILQEAPQVDVLSLIAAGFGISILPA
                     SVREIGRGNVVFRPLAGTPTTELLLVWRAGDASPSRQAFVEVVRRVGVRLEDAES"
BASE COUNT          668 a         1318 c         1414 g          603 t
ORIGIN      
        1 ccaacggcgc cccgcggctg gaacgtaagc gcgccgggcc agcttttcgc tcgatcaacg
       61 cgcgagcgtg cgtctcaatc ggcgggggcc tcgcgtcgag cgcgccgcag acgaaaaagg
      121 tcgcaggttg tgccgcctgc acctacaccg ccggtgctcg gtattccggc gtctcgcgcg
      181 tctcacgtgc ttctcttcac gggacagctg tccgcatcgg tttcagtggc aacgaacgct
      241 gtccttcgct cgtgagaact tcgcgcgtgg gacactgaga agaagttgca gaacgccgga
      301 cgggcttgta acgtgttcgc accatgcgtc ctcaatatat aactgttgct ttgattctgg
      361 gcttagtgtc tctcccgctc tcatgcggcg gcgatgacga cgacacggct ccctcggctg
      421 gcaagagcgg ctcggctggc aagggcggct cggctggcaa gggcggctct tccggcgccg
      481 ctaccgcagg caaaggcggc tcggctggta agggcggcac tggcggcacg gcaggcggcg
      541 gcgcgacggc gggtacgggc gccacgggcg gcacgaccgc gggcaggggc ggtaccggcg
      601 gcaccggtgg caccggcacg tccggcggcg gagcaggcgg cgaaccggca ggtgccggcg
      661 gcgtcgagca ggctggtgca ggccagggcg gcgccgacca aggcggcgcg ggccagggcg
      721 gtgcgcccgc cacggacccc gacgcggcga cccgtctggc ggcggctcag tccatctgcg
      781 ccaagccggc gagctcgtcg aatacgtcct gtggcaacga gacggcgtgc gtcgcttact
      841 acacgaatac ggccgggttc gacgaggcgt gcacgacgaa tctgacgagt atgctcacgt
      901 gtctcgagcc ccagccggcg agcgatttca actgcggacc gagctacatc gccgtcgatg
      961 gcgctgcttc cgctggcagc tgttacgagc tctggcacac ctggcaatac tgccccggtg
     1021 ttgtgaagtg atcagtccgg cggcctagcg ccgcaaatgt gaacgtgcgc gagccaaatc
     1081 gagaggtgcg cggctcgcac gcggcaaagg tgaatacggg tgagccacgc aatcgtgcgc
     1141 gtggctcgcg tcgttgtcca ctcactcgcg ggcgcttcgt gcccaggcgc tgctgctagg
     1201 aggtccttat cgaccatccg cgaagccgtg ctcgctgacg cgcgtgagcc atgcatcgcg
     1261 catgcgccgg aaccagggga gatcggtttc gagttcgcaa agggcgcgca cgcgccagga
     1321 ggccgcccgg ccgtgaactc tctcgtacac gaccgtggaa tcgcggacga gttggtgcag
     1381 caagggcacg ctcgcgtcgg cgagcgcggt cacgtctacc tcgataccga gcttggccga
     1441 caagtcaccg gcaagggcga aaaggtcgac accgggcgct tcgacggcca agtccaggtc
     1501 ggagttcggc cctgcacgcc ccgtggcgcg cgagccgaag agcagcgcaa gctcgacgcc
     1561 gggcagttgc gccagtgcgt cccggatact cgcgagatga tccgaagcct cagcgctcac
     1621 tgagcgagca taccacgagg tgtgcgcatg ctccgcgtac ccccgaacct gtcagaacgt
     1681 cgtcgaaaac gagacgctgc tcggccccac gcgcacgctg gcctgcggcg ccgccttctt
     1741 ttcttcgtcc ttggtcgtcg ggggcctgga cagcgtgagg tagagcgcga tgccgccggt
     1801 gacgatggcg gcggcgccga gcacgtcggc ggcgcgcaga agggtcgtgg cgcggctgcc
     1861 ggctgaatcg agttcggcgc gcgaggagcc gtaggtcgag cggaggtggt cgaggtcgtt
     1921 cgcggcgccg atgccgaggc cgcccgtgac ggcggcgccg gcggcgaacg cggctgtggc
     1981 ggaccaggtg ccccagatcc acgcggtgcg atcgctctgg gcctggggcg cgacgacgac
     2041 gacggggccg cgatccgggg gcgtcctttg gaggtcgacg cgcagactct gggtgtcgcg
     2101 gctcgcgagc gtgaggggcg tctcgcgcgg gtcgaagcct tctttacgca cgatgatgcg
     2161 gtggtcgccc gtgtcgagga ggagtggctc gggcaggggc gtggtgcccg cgagctcgcc
     2221 gtcgacgagg atgtcagcgc cggcttcgtt gcagtcgatc gctagcgtgg cggtgcgcgt
     2281 cgacagcatt tcgatgtcgt cgttcacgct cttgcgacgg tcggcgtcga tcttgtcgcc
     2341 gccctctttg aggtacgcct ggagggcctt gaaggcccgc gcgtagtcat gcagctgaat
     2401 gcggacttgc ccgatattgt agagggcgcg gtaattcggg acgagctcgt aggcgcgatc
     2461 gaattcgatg gccgcgcgct tgaattcgcc gtcggcgtag agcgcgaggc cggcttcgta
     2521 gtgctcgctc gcttcgcgaa tggcggcttc ggtcggggcg gcggcggcgg gagccgcact
     2581 gtcggcgggc ggcgtctccc cggcgcgcgc gaagccggcg ctgaacgtga cggccaacgc
     2641 gagcacacaa gacgaagcga acggaccctc gaacgtgcga cgaagcatcg ctcgaatcct
     2701 atcacgcttt gtcgagtcgg ttcgacacgc gtcaacgtgt cgtcggtgca cgctacgtcc
     2761 gacggccgcg ccgcaacagc cgcttaccga agtggacgcg agtacaccca tgtaggcctt
     2821 acggagcgag tcacccaccg attggccgtc ttgcgcgccg cgagctcaga atgtctcgcc
     2881 gcgcgcgcca ctcatcggtc gatgcgcacc tttcgtttcg tggttttgac gtcgctcttg
     2941 ctctcggctt gtggtgggag cagcggcgac cattcgaatg accccgccgt ccaatccacc
     3001 gcggacgccg agcgcgccta cgttggactc gacgcttcca tcgacaaagc catcacgctc
     3061 ggcttcgacg gcttcaacgc ggcgacgaac gcgaatatcg cgccgcaaac cgcgacgggc
     3121 gacgacaagg gcacgctcac ggtgagcggc caggtcgacc agggcagctc ttccaacaag
     3181 acgatgcacc tgacggaagc gctggccacg tacagcgacg acggtcagct cgcctacgcg
     3241 accgacgacg cggcgctgcc cgcgctcgag atgaagctca ccaaggtgcc gacgggtacg
     3301 ctcgacggca cgctgaacgg ctccttcaag atcgacggca agctcaaagg cagcgtcacg
     3361 cttgcgctca cgttttccgg cgagctccag gcgaacgccg acgatccgac gcaggtcgag
     3421 cgtaagccgg ggacgacgca catcacgggc acggcgactt cgggtaacga cacgtacacc
     3481 gtcgacgtca cacgctgaaa cgccgagccc gccgttcggg ccccgcccgc tacgactccg
     3541 cgtcctcgag ccgcacgccg acgcgccgca ccacctcgac gaacgcttgg cgtgacggcg
     3601 acgcatcgcc cgcgcgccac acgagcaaga gctcggtagt cggtgtcccc gcgagcggac
     3661 ggaagacgac gttaccgcgc ccaatctcgc gcacggacgc cggcaggatc gaaatcccga
     3721 agcccgcggc gatgaggctc agcacgtcca cttgcggcgc ctcttgcaag atgcgcggcg
     3781 tgaagcccgc gcgctggcag agcgcgatca agaggtcgaa aaacgccggg gcacgcgggc
     3841 gcgggaagaa gacgaacggc tcggacgcca gcgtttcgag gcggagcggc ccaatgcccg
     3901 cgagtggatg atccgccggg aggccgacga cgagcggctc gcgccgaacg cactcggccg
     3961 tgagcgcttt gtccgagagc gggccgcgca cgaagcccac gtc
//
LOCUS       DATIML010000041         1908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3473267, whole genome shotgun sequence.
ACCESSION   DATIML010000041 DATIML010000000
VERSION     DATIML010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3473267"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VLJ38_00620"
     CDS             complement(<1..511)
                     /locus_tag="VLJ38_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU38024.1"
                     /translation="METTYDVLVLGGGPGGYPCAIRAGQLGLSVACIEEEEVGGVCVN
                     WGCIPSKALIANAHFLEKSKHIADAGIAVANVNVDVDKMQDWKGGIVKKMTGGVRSLL
                     KTNKATLIEGRGRVVDKRTLEVKLKDGSTQRLTAKKAIVVATGSATIQVPGFEFDGER
                     VIGAREAVSL"
     gene            complement(623..1684)
                     /locus_tag="VLJ38_00625"
     CDS             complement(623..1684)
                     /locus_tag="VLJ38_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSU38025.1"
                     /translation="MTLELLRVLGEDGRASLDEALLPDPTRRREIFRQLWRARRVDER
                     LGALQRQGRIGFFGSCFGQEAVPVGAAFALAQNDWVFPALREGAVMLVRGFPLALYFA
                     QMFGSARDVQKGRQMPSHQASRRVHQVSWSSSIGSQLPHAVGMAFAAARAGDSAIALA
                     FLGEGATSTPDFHAALNLAGVLRARVVFVCLNNQYALSTSARRQTNSESFAVKARAYG
                     FHGRRVDGNDVLAVELALRQASESARSGLGPTLVECVTYRRGPHSSSDDPTRYRSAAE
                     EAAWAARDPVALFGRHLSEARLLAPGDESRLIAAIDLEIDAALAVAEADPPPARETLF
                     EDVYARMPWHLAEQARPVP"
     gene            complement(1696..>1908)
                     /locus_tag="VLJ38_00630"
     CDS             complement(1696..>1908)
                     /locus_tag="VLJ38_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38026.1"
                     /translation="YAVRSGVLQTEIETLDACLTGQSPLPPPNLGLLKPRRSEVLALV
                     HELLHADQRVHEDEEALLGEISSLLE"
BASE COUNT          302 a          672 c          640 g          294 t
ORIGIN      
        1 gcaagctcac ggcctcgcgc gcgccgatca cgcgctcgcc gtcgaactcg aagccgggca
       61 cctggatcgt cgccgaaccc gtggcgacga cgatcgcttt ctttgcggtc aggcgctggg
      121 tcgagccgtc tttgagcttc acttcgagcg tgcgcttgtc gacgacgcgg ccgcgcccct
      181 cgatcagggt cgccttgttc gtcttgagca gcgagcgcac gccgcccgtc atcttcttga
      241 cgatgccgcc cttccaatcc tgcatcttgt cgacgtcgac gttcacgttc gcgacggcga
      301 tgcccgcgtc ggcgatgtgc ttcgacttct cgaggaagtg cgcgttggcg atcagggcct
      361 tcgaaggaat gcagccccaa ttgacgcaca caccaccgac ctcctcttcc tcgatgcaag
      421 cgaccgagag cccgagctgc cccgcgcgga tcgcgcaggg gtagcctccc ggaccaccgc
      481 ctagaaccag gacatcgtag gtcgtctcca tggcgcgccc aagtacccca ccccccggcg
      541 tctcacaagg ccgcgcgcgg gggacaacac agtgtgccgt tttttttcac gcgtatttcg
      601 tccaacaccg cccacgtcgt ggctagggaa cggggcgggc ttgctcggcg agatgccagg
      661 gcatccgcgc gtagacgtct tcgaaaagcg tctcccgggc cggaggcggg tcggcctcgg
      721 caacggccag cgcggcgtcg atttcgaggt cgatcgccgc gatgagccgg ctctcgtcgc
      781 cgggcgcgag caaccgagcc tccgacaggt gccgtccgaa gagtgccacg ggatcgcgtg
      841 cggcccacgc cgcttcttcg gccgcgctgc gataacgcgt ggggtcgtcg ctcgaggagt
      901 gcgggccacg ccgataggtc acgcactcga cgagcgtcgg gccgaggccc gagcgtgcgc
      961 tctcgctcgc ttggcgcaag gcgagctcga cggcgagcac gtcgttgccg tcgacgcgcc
     1021 ggccgtggaa gccgtacgcg cgggccttca cggcgaaaga ctccgagttc gtctgccggc
     1081 gcgccgaggt gctgagcgcg tactgattgt tcaggcacac gaagacgacg cgcgcgcgaa
     1141 gcacgcccgc gaggttcagc gcggcgtgaa aatccggcgt gctcgtggcg ccctcgccga
     1201 ggaacgcgag cgcaatcgcc gagtcgccgg cgcgcgccgc ggcgaacgcc atgccgacgg
     1261 cgtgcgggag ctgtgagcca atcgagctcg accaggagac ctggtggacg cgccggctcg
     1321 cttggtggct cggcatttgc cgacccttct gcacgtcgcg cgcgctgccg aacatttggg
     1381 cgaagtagag ggcgagcggg aatccgcgca cgagcatgac cgcgccctcg cgcagcgccg
     1441 ggaagaccca gtcattctgc gcgagcgcga acgctgcacc gacgggcacc gcctcctgcc
     1501 cgaagcacga gccgaaaaag ccgatgcgcc cctggcgctg cagcgcgccc agccgctcgt
     1561 cgacgcggcg cgcgcgccag agctgccgga atatttcccg gcgtcgtgtc ggatccggaa
     1621 gtagcgcctc gtcgagcgaa gcacggccgt cctcgccgag cacgcgcaag agctcgagcg
     1681 tcacgccgct tcgacctact cgagcaacga cgaaatttcg ccgagcagcg cctcttcgtc
     1741 ttcgtggacg cgctggtcgg cgtgcaaaag ctcgtgcacc agcgcgagca cctcgcttcg
     1801 tcgcggcttc aacagcccga ggttcggcgg cggcagcggc gactgcccgg tgaggcacgc
     1861 atcgagcgtc tcgatttccg tctgcaagac gcccgagcgc acggcgta
//
LOCUS       DATIML010000042         5089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2607071, whole genome shotgun sequence.
ACCESSION   DATIML010000042 DATIML010000000
VERSION     DATIML010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5089
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2607071"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1151)
                     /locus_tag="VLJ38_00635"
     CDS             complement(<1..1151)
                     /locus_tag="VLJ38_00635"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HSU38027.1"
                     /translation="MTTDSISLIETGIPRFDCLLGGGIPARHLLIITGDPGTGKTVLC
                     SQIAFSLAARDTSVVLATLASEAQEKLISALSGFSFFDANRVGNELFFVSAYPWVQKG
                     PKDAKDLLLKTVRERRAKLLFIDGLRSLRDLWQDEAKLRGFLYELNVGLAQLNAVGLL
                     TTEYPLPKLMEYPEATTVDGIVSLSARSFSGRVVRRIQVAKLRGRAHVGGEHLMHIAQ
                     EGIVIVPRLEETTRADQGFQPSTARCGFGLPALDDMINGGLPAMSTTLMAGSTGAGKT
                     LLGMQFIAAGAAHGEPGLLINYSEPVGRLVARAKAVSIDVEPLSRAGSLHIRYRPATN
                     CEGDELTAEILQLTRDLNIKRLVLDGVGDLESSILEEERVRGLFMSLIV"
     gene            complement(1471..1917)
                     /locus_tag="VLJ38_00640"
     CDS             complement(1471..1917)
                     /locus_tag="VLJ38_00640"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSU38028.1"
                     /translation="MLTTWNAVSTLDRMLDDVMGSAFGTATNPRTFNPTIDIRTSEDE
                     VVFVCDVPGMKQEDLEITLENHVLTLKGARKFEGREKEQVLLGRAYGTFSRSFTLPDA
                     LDEEKLSAELADGVLTVRVPRHPKAKPRKIAINGGSMSGGSKQLNE"
     gene            complement(2144..2785)
                     /locus_tag="VLJ38_00645"
     CDS             complement(2144..2785)
                     /locus_tag="VLJ38_00645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38029.1"
                     /translation="MVASGLSALLFGGGCSREAPAAVSPAEHAELGVSASARTVGTSC
                     ELSRGTGMTDVAPRVLLELAGAQGELTAMLRDHPPAPGARVPIGAFEAFVGDPRLTAL
                     RVYHVLTPNDVAQSVPWELEGRAGTKEHLDITMTPHVSGATPGGVRIEVDVRGHAHTT
                     VVVRDQESVVFSGFSVPLAESTEALFVLTPYVVWSDADSRRLLECMRAVRGRN"
     gene            complement(2897..3688)
                     /locus_tag="VLJ38_00650"
     CDS             complement(2897..3688)
                     /locus_tag="VLJ38_00650"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSU38030.1"
                     /translation="MNLSTGELVKMLEPLLRTTPSGLFAFDADGTLWSGDVGEDVFKL
                     AVEQGLLRDEARAALAREASSHAIDPSGSANAIAARLSAAHFAGTYAERDAYAMMTWC
                     YAGFSLEELTRLAQRAFAETRLSERLHAELAPILALARKARIPVAVVSASPLPIVREA
                     VRLWGIDADAVAASRAAVASERLLDQLAAPVPYAEAKVTALEALFPKHVLLASFGDSA
                     FDLELLRAARVGVAVRPKPALAARLNELESIATLEWSDEEDTRST"
     gene            3711..>5089
                     /locus_tag="VLJ38_00655"
     CDS             3711..>5089
                     /locus_tag="VLJ38_00655"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSU38031.1"
                     /translation="MALFVHLSDLHLTTEAGPQALLFERLVHTLELERKASGVASLPL
                     VITGDVFDSASGPIEPKVSAFLRLLELMRGALGGDAPTIILPGNHDRRRLGIVGPHRT
                     KLFQALADAVDPARVFVAGCKAPFLAEQVPPALHGLPAHVVTLDSSYLPHGLFSAGGT
                     IRREDLLQVHAELPNDGKPLLLLVHHHLIPTPITDISHVDSQKTPKFLRWVIGKLLPA
                     LVSNADREELTMTALGAGTALSMLNSFGRAVLLLHGHKHVPTARILRGMTEGCGDILL
                     VSAGSAGLRERVGEARHPDAARLWPTFNRVELDLDRVRVQALSFSPKRSDKSPVRREL
                     AAAGLVERKWEPLSVSFHPRDAPARVALDRAEYRLVRSPVAPGRFDVSCERQVELEPG
                     ASLRRYVDFVGVLPLLVPRQRRGGQASRRIELTLGGATHFAIEHGLCRTLDEGKRSYG
                     AGVAFESVGL"
BASE COUNT          861 a         1681 c         1661 g          886 t
ORIGIN      
        1 tgtacgatca aggacatgaa tagtccccgc acgcgctctt cttctagaat gctcgactcc
       61 aggtcgccga caccgtcgag caccaagcgc ttgatgttca ggtcgcgcgt cagctgcaaa
      121 atttcggcgg tgagctcgtc cccttcgcaa ttcgtcgccg gtcgatagcg gatgtgtaag
      181 ctcccggctc ggctcagcgg ctcgacgtcg atagacaccg ctttagctcg tgccacgagg
      241 cgacccaccg gctccgagta gttgatcagc agcccgggct ctccgtgagc tgcgcccgcc
      301 gcgatgaact gcatgccgag cagggtcttt ccggctcccg tgctgccggc catcagcgtg
      361 gtgctcatcg ccggcaagcc gccgttgatc atgtcgtcga gcgcgggcaa tccgaaaccg
      421 caacgcgccg tgctcggctg gaagccctgg tcggcacgcg tggtttcttc gaggcgcggc
      481 acgatgacga taccctcttg cgcaatgtgc atcaggtgct cgccaccgac atgagcgcga
      541 cctcgaagct tcgctacctg gattctgcgc acgacccgtc cgctgaaact ccgggcgctc
      601 agcgagacga tgccatcgac ggtcgtggct tccggatact ccatcagctt cggtagcggg
      661 tactcggtcg tcagcaatcc gacggcgttc agttgcgcta gaccgacgtt caactcgtag
      721 aggaagccgc gtagcttggc ctcgtcttgc cagagatcgc gcaaggagcg gagcccatcg
      781 atgaaaagga gcttcgctct gcgctcccgc accgttttga gcaggaggtc cttcgcgtcc
      841 ttggggccct tctgcaccca gggataggcg ctgacgaaga atagctcgtt accgacgcgg
      901 ttcgcgtcga agaacgagaa gccactgagc gccgagatga gcttttcttg agcctccgat
      961 gccaaggtgg ccaggacgac gctcgtgtcg cgcgcagcga gggaaaaggc gatctggctg
     1021 caaagaacgg tcttgcccgt gccagggtca ccagtgatga tcagtaaatg tcgggcggga
     1081 atgccaccgc cgagcaggca gtcgaacctc ggtatgcctg tctcaatcag tgatatcgaa
     1141 tcggtggtca tcagaggaag ctccaggatc aagaaccggt cggcacggcc acgactaccc
     1201 gtacacgtgg tgatcccgac tcctcgaact gtcaactccg gcgcccgtcg aggcaaatca
     1261 gcacacgcag cattgccacg gtgtgatcaa ttcgacgggg cggcaccggc gaaaggtgcc
     1321 accccgttcc atgcgcggca tgcgcttagt gggatacgat ttttgggttg tggaccgacg
     1381 tagagaggac gagcgccgag gctctgacac gctttgcggc ccgactcgag cggcaccgca
     1441 tgagtgacgc tgcgccctcc gtcgcgagga tcattcgttc aactgcttcg agccgccgct
     1501 catcgagccg ccgttgatcg cgatcttgcg cggcttggcc ttcggatggc gcgggacccg
     1561 cacggtgagc acgccgtcgg cgagctcggc ggagagcttc tcctcgtcga gcgcgtcggg
     1621 aagcgtgaag gagcggctga aagtaccgta ggcgcggccg agcagcacct gctccttttc
     1681 gcggccctcg aacttgcggg cgcctttcag cgtgaggacg tgattttcga gcgtgatctc
     1741 cagatcttcc tgcttcatgc cggggacgtc gcagacgaac accacttcgt cctcgctcgt
     1801 gcggatgtcg atggtcggat tgaacgttcg cggattcgtt gccgtaccga acgccgatcc
     1861 catgacatcg tcgagcatgc gatcgagcgt cgagacggca ttccaggtcg tcaacatgga
     1921 aatacctcct gagggttctt cgcatccagc gcccggccgc cgaagctcgg tggccgagca
     1981 cacgactccg ataaacatgt cgtgcgcacg cgcaaggggc gccgagcaat ttttcgccgc
     2041 gcgccccggg cagctgctcc ggtatccgcg ggcttgcagc gccgcccgcg cgccgctcgc
     2101 cggccctcga gttgacgccg taggatcgag agcgaaagct acttcagttg cggccgcgga
     2161 cagcgcgcat gcattcgagc aaacgacgag aatcggcgtc gctccagacc acgtacggcg
     2221 tgagcacgaa cagcgcttcg gtgctctcgg ccaagggcac cgagaaccca ctaaaaacga
     2281 cgctctcctg gtcacgaacg acgaccgtcg tgtgggcgtg cccgcggaca tcgacctcga
     2341 tgcgcacacc cccgggcgtg gctccactca cgtgtggagt catggtgata tcgaggtgct
     2401 ccttcgtgcc agcgcgtccc tccagctccc aaggcaccga ttgcgccacg tcgttgggcg
     2461 tgagcacgtg atacaccctc aaggccgtga gccgggggtc accgacgaac gcctcgaagg
     2521 cgccgatcgg caccctcgcg cccggcgcgg gtggatgatc gcgaagcatg gccgtgagtt
     2581 caccctgcgc gcccgctagc tctagcaaca ctcggggggc cacgtccgtc atgccggtgc
     2641 ctcgggagag ttcgcacgac gtacccaccg tgcgtgcgct cgccgacacg ccgagctcgg
     2701 cgtgctcggc cggtgagacg gccgccgggg cctcacgact gcagccgccg ccgaacaaga
     2761 gggccgaaag acccgaggca accaaccaat ttcgtcgagc cgtcaccacg ccacccaatc
     2821 gccggagcgt agcttgcccg cgggaccttg tctcacgaat ctgggcggat tcgtcggcac
     2881 gggtcaagca tccgcgctaa gtcgagcgcg tatcctcttc gtccgaccac tcgagtgtgg
     2941 cgatgctctc gagctcgttg agccgagccg cgagcgccgg tttcgggcgc accgcgacgc
     3001 ccacgcgcgc ggcgcgcagg agctcgaggt cgaaggcgct gtcgccgaag ctggcgagga
     3061 gcacgtgctt cgggaagagc gcctcgaggg cagtcacttt ggcctcggcg tacggcaccg
     3121 gagcggcgag ctggtcgagg aggcgctcgg aggcgaccgc cgcgcgactg gcggcgaccg
     3181 cgtcggcgtc gatgccccac agccgaaccg cttcgcgcac gatgggtagc ggcgaagccg
     3241 atacgacggc gacggggatg cgcgctttgc gtgccaacgc gaggatcggt gcgagctcgg
     3301 cgtgcaagcg ttcgctgagg cgtgtctctg cgaacgctcg ttgcgccaga cgcgtgagct
     3361 cttcgaggga aaaccccgcg tagcaccagg tcatcatcgc gtaggcgtcg cgctccgcgt
     3421 aagtgccggc aaagtgcgcg gccgaaaggc gcgcggcaat cgcgttcgcg ctgccgctcg
     3481 ggtcgatggc atgggagctc gcttcgcgcg cgagcgcagc gcgggcttcg tcgcgcaaga
     3541 ggccctgctc caccgcgagc ttgaaaacgt cctctccgac gtcgcccgac cacaacgtgc
     3601 cgtccgcgtc gaaagcgaag agcccgctcg gcgtagtacg cagcagcggc tcgagcattt
     3661 tcaccagttc accggtgctg aggttcacgg gtataagggg agcgtacacg atggcgctct
     3721 tcgtgcatct ctctgatctt cacctgacga ccgaggccgg accgcaagcg ctgctcttcg
     3781 agcggctcgt tcacaccctc gagctcgagc gcaaggcgag cggcgtggcc tcgctgccgc
     3841 tcgtcatcac gggggacgtc ttcgattcag cgagcgggcc gatcgagccc aaagtctccg
     3901 catttctgcg gctgctcgag ctcatgcggg gcgcgctcgg cggcgacgcg ccgacgatca
     3961 tcctgccggg caaccacgat cggcggcgtc tcggaatcgt gggcccacat cggaccaagc
     4021 tgtttcaggc gctcgccgac gccgtcgacc ccgctcgtgt cttcgttgcg ggttgcaaag
     4081 caccgtttct ggcggagcag gtgccgcccg cgttgcatgg gctgcccgcg cacgtcgtga
     4141 cgctcgattc gtcgtacctg ccgcatggcc tcttcagcgc gggcgggacg attcggcgcg
     4201 aggatctgct gcaagttcac gccgagctgc cgaacgacgg caagcccctg ctgctcctcg
     4261 tccatcacca tctgattccg accccgatca cggacatcag ccacgtcgac tcgcagaaga
     4321 caccgaagtt tctgcgctgg gtcatcggca agctgcttcc ggcgctggtc tcgaacgccg
     4381 atcgcgagga gctcaccatg acggcgctcg gcgcgggcac ggcattgtcg atgctgaact
     4441 ctttcgggcg tgccgtgctc ttgctgcatg gtcacaagca cgtcccgacc gcacgcattt
     4501 tgcgaggcat gacggaggga tgtggagaca tcctgctcgt ctccgccggc agcgccgggc
     4561 tccgtgaacg cgtcggagaa gcacgacatc cggacgccgc gcggctttgg cccaccttca
     4621 accgcgtgga gctcgacctc gatcgcgtgc gcgtgcaggc gctctccttt tcgcccaaac
     4681 gcagcgacaa atccccggtg cgccgtgagc tcgccgcggc ggggctggtc gaacggaaat
     4741 gggagccgct atcggtgagc tttcatccac gcgacgcgcc tgcgcgggtt gcgctggatc
     4801 gggccgaata ccgcctggtc cgctcgcccg tggccccggg gcgcttcgac gtctcgtgcg
     4861 agcggcaagt cgagctcgag ccgggagcga gcctgcgtcg ctacgtggat ttcgtgggtg
     4921 tgctgccgtt actcgtgccg cgtcagcggc gcgggggcca agcaagccgc cggatcgagc
     4981 tcactctcgg cggcgcgact cattttgcga tcgagcatgg gctctgccgc actctggacg
     5041 agggcaaacg ctcttacggt gcgggggtag cattcgagtc ggtcggact
//
LOCUS       DATIML010000043         4475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1741112, whole genome shotgun sequence.
ACCESSION   DATIML010000043 DATIML010000000
VERSION     DATIML010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4475
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1741112"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..1453)
                     /locus_tag="VLJ38_00660"
     CDS             complement(191..1453)
                     /locus_tag="VLJ38_00660"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HSU38032.1"
                     /translation="MEPSRLSSIREQAERAKGAKAGLAALDRAQKDRALAAIARELRA
                     RVADIQRENELDLAAARAAGLAPALIDRLRMDPKGVEATARAVEHVMTLADPVASRGP
                     MQRLPSGIQVGRQRLPLGVIAIIYESRPNVTVDAATLCLKSGNAVLLRGGKEAAHTNR
                     VLGGIIASALASSGLNPEAVQIIPAGDRDGVRELVSLTGLIDLAIPRGGEGLIRFVVE
                     HARVPVVQHFLGVCHLFLDQGCDVDMARALALDGKVRRPGVCNALECLLVHADDAARL
                     LPPVARALIAEGVELRGDARACELVPEAKAATDADWGKEYLAKILAVRVVSDLDGALA
                     HVARYGSNHSEAICTDSFSHAERWLREVDASCVLVNASTRFNDGGELGLGAEIGISTT
                     KLHAYGPMGLESLTAEKWVVIGGGQIRG"
     gene            complement(1722..2063)
                     /locus_tag="VLJ38_00665"
     CDS             complement(1722..2063)
                     /locus_tag="VLJ38_00665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38033.1"
                     /translation="MARLADREARASRACSALERLVPAAIGLLASACPSAPKEGPPPA
                     ETFEVASAAPHALGALAGGTQAAPHAVVSPGGLARPAPDEPAPDPDEEDDGGPPPTPD
                     AGAGSPEDLPL"
     gene            complement(2051..3013)
                     /locus_tag="VLJ38_00670"
     CDS             complement(2051..3013)
                     /locus_tag="VLJ38_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU38034.1"
                     /translation="MSLAPPTPIAAEPGAVVITGICGRLGRRLARKLHRQRRVIGIDR
                     RSFPDRPADVEHHELDLRSPRVREVFSAGVSALVHLGVVHDPRGDTAEHHASNVTGLQ
                     KLLEYVEYFGLQKVVLLSSANVYGPRPDNPQFLSEEAPLLGAGPFSRIRDLVELDMCA
                     QSFFWRLQEVKTVILRPAHILGTVRNAPSNYLRLSVVPTLLGFDPMLQAVHQDDVVRA
                     ILLALAPSARGIYNIAGPPAVPLSRVLELLERPTVAVPHTVARLGVERLFRWRVTSFP
                     APELDFIRYVCMIDDARARQELGYAPAHGLVSTLCAVDEERWLG"
     gene            complement(3016..3939)
                     /locus_tag="VLJ38_00675"
     CDS             complement(3016..3939)
                     /locus_tag="VLJ38_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSU38035.1"
                     /translation="MAQKTALARLTEVATGRGLPLLRRAFDGVQRVAGEVTERLLGSD
                     FEDRFRVLADRYEQLGGDPFGFDPEAVRTAALASAFFHRAYFRTDVYDVDRVPAGRVI
                     LVANHSGQIPIDAAIIGCALFFDANPPRITRAMVDKWAATLPFVSTFFSRMGQVVGLP
                     ENARRLLNMGELLLVFPEGMRGVSKPFSERYQLKDFGRGFMRLALETKTPIVPVGVIG
                     AEEQYLSFGRASWAARAFGLPVFPLIPQMLLPGGQLPLPTKYRLFFGEPLYFEGNPDD
                     PQFVADKVYLVREAVAHILRRGLAQRRSIFL"
     gene            3976..>4475
                     /locus_tag="VLJ38_00680"
     CDS             3976..>4475
                     /locus_tag="VLJ38_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HSU38036.1"
                     /translation="MPQDFERIVPAPLGPGSRVAVIAPAGPCDRTLLFRGLGWLAERY
                     RVEFDPSIVERRGYLAGSDARRLAELDRALCDPGIGAVLAARGGYGLTRIVERGNFAA
                     LRRYPKWLVGFSDVTALHVEALRAGVASLHATNVGVLGQGDARTRDAFVRAVEAPAVP
                     RLIDGL"
BASE COUNT          715 a         1514 c         1574 g          672 t
ORIGIN      
        1 aggaagtcgg cgtagtcgac cttgccggtg acatcgagga tctcgatttc gctcgctttc
       61 ttgtctagcg ccgcttgcgc ggcgaggatc gccatccgct tggcttcctc ggaaggtgtc
      121 ccaccccgtt cgagaactcg cggcgcggcg ctcgtgcgcg ccggcctccg cgtcgattta
      181 gtgcgctttt tcaaccgcga atctggcctc cgccaatgac cacccatttt tcggccgtga
      241 ggctctcgag ccccatgggt ccgtaagcgt gcagcttggt ggtcgaaata ccaatctctg
      301 cgccgagccc gagctcgccg ccatcgttga agcgagtcga agcgttcacg agcacgcagc
      361 tcgcgtccac ttccctgagc cagcgctcgg cgtggctgaa gctgtcggtg cagatcgctt
      421 cgctatggtt cgagccgtag cgcgcgacgt gcgcgagcgc gccgtcgaga tcactcacga
      481 cgcgcacggc gaggatcttc gcgaggtact ccttgcccca atccgcgtcc gtggcggcct
      541 tggcctcggg cacgagctcg cacgcgcgcg cgtcgccgcg gagctcgacg ccttcggcga
      601 tgagcgcgcg ggcgacgggc ggcaagagcc gcgcggcatc gtccgcgtgc acgagcagac
      661 actcgagggc gttgcagacg ccaggccgtc gcaccttgcc gtcgagcgcc agggcacggg
      721 ccatgtcgac gtcgcacccc tggtcgagga acaagtgaca gacaccgagg aaatgctgca
      781 ccaccggcac gcgagcgtgc tcgacgacga agcgaatcag accttcgccc ccgcgcggga
      841 tggcgagatc gatgagcccc gtgagcgaca cgagctcccg cacgccgtcg cgatcgcccg
      901 ccgggataat ctgcacggct tccggattca gcccgctcga ggcgagcgcg ctcgcgatga
      961 tgccgccgag gacacgattg gtgtgcgccg cttctttgcc gccgcgaagc agcacggcgt
     1021 tacctgactt caagcacagc gtcgctgcgt ccacggtgac gttcggccgc gactcgtaaa
     1081 tgatggcaat caccccgagc ggcagccgct gtcgcccgac ctggatcccg ctcggtagcc
     1141 gttgcatcgg cccgcggctc gcgacgggat cggccagcgt catcacgtgc tcgacggccc
     1201 gcgccgtcgc ctcgacgccc ttcggatcca tgcgcagccg atcgatcagc gcgggcgcga
     1261 ggcccgccgc acgcgcggcc gcgagatcca gctcattttc acgctgaatg tccgctacgc
     1321 gtgcccggag ctcgcgcgcg atcgccgcga gcgcgcgatc cttctgggcg cgatcgagcg
     1381 cagcaagtcc cgctttcgca cccttggcgc gttcggcttg ctcgcgaata ctgctcaaac
     1441 ggctcggctc cacgccctag tctactcgtc ccgagcgccg ggggaagggg ccgcgggcac
     1501 gggcatgggg atcgcgctcg gggcgggagg gccttcggtc ggcgcggaac ctaggctggc
     1561 agccgcgctc gcgctgcccg gagcgctcgc ggaggcggcc ggccagggcg gaaaggagcg
     1621 cgtttcgtat tcgggagccg gcgtacccgg cgggaggcgc ttcgttgcac aggcgacgac
     1681 aacgagcgtc acggcgaaca atccgagcgt cagagcgcga ttcaaagcgg caggtcctcg
     1741 gggcttcctg cccctgcatc gggtgtcggc ggcggcccgc cgtcgtcttc ctcgtccggg
     1801 tccggcgccg gctcgtcggg cgcggggcgc gcgagaccgc cggggctcac gaccgcgtgc
     1861 ggcgcggctt gggtcccgcc ggcaagcgcg ccgagtgcgt ggggagctgc ggacgccact
     1921 tcgaaggtct cggcgggcgg cgggccctct ttgggcgcgc tcggacacgc gctcgcgagc
     1981 aagccgatgg ccgcggggac gagtcgctct agcgcggagc aagcgcgact cgcacgtgcc
     2041 tcgcggtccg ctaaccgagc catcgctcct cgtccacggc gcacaaggtg gacacgagtc
     2101 cgtgggctgg agcgtagccg agctcctgac gcgcgcgcgc gtcgtcaatc atgcagacgt
     2161 agcgaatgaa gtcgagctcg ggcgcgggaa acgaagtgac acgccagcga aagagccgct
     2221 ccacaccgag gcgcgccacc gtgtgtggca ccgcgaccgt cggccgctcg agcagctcga
     2281 gcacgcgcga aagcggcacg gccggcgggc ccgcgatgtt gtagataccg cgcgccgaag
     2341 gcgcgagcgc gagcaggatc gcgcgcacga cgtcgtcttg atgcacggcc tgcagcatcg
     2401 gatcgaagcc gagcaaggtc ggcacgaccg agaggcgcag gtagttgctc ggcgcgttgc
     2461 gcaccgtgcc gaggatgtgc gccggccgca aaatcaccgt ctttacctcc tgcagccgcc
     2521 agaagaacga ctgggcgcac atatcgagct ccaccaagtc gcggatgcga ctgaagggtc
     2581 cggcgccgag cagcggcgct tcctcgctca gaaattgcgg gttgtcgggg cgcggcccgt
     2641 agacgttcgc gctcgatagc aagacgacct tttggaggcc gaagtattcg acgtattcga
     2701 ggagcttttg caggcccgtg acgttcgagg cgtgatgctc tgcggtgtcg ccgcggggat
     2761 cgtgcacgac gcccaggtgt acgagcgcgc tcacgcccgc gctgaagacc tcgcgcacgc
     2821 gcggactcct gaggtcgagc tcgtgatgtt cgacatcggc gggacggtcg ggaaacgagc
     2881 gccggtcgat gccgatcacg cggcgctgcc gatggagctt gcgcgcgagg cggcggccaa
     2941 gccgtccgca gatgccggtg atcacgaccg cgccgggctc tgcggcgatc ggagtcggag
     3001 gcgcaaggct catactcaca gaaaaatgct ccggcgttgg gcgaggccgc gccgcaggat
     3061 gtgggcgacg gcttcacgca cgaggtacac cttatcggcg acgaactgcg gatcgtcggg
     3121 attgccctcg aaatagagcg gttcaccgaa gaacagccga tacttcgtcg gcagcggcaa
     3181 ctgcccgccc ggcaagagca tctgtgggat cagcggaaac acgggcaatc caaacgcgcg
     3241 cgccgcccac gaggcccgcc caaagctcaa gtactgctcc tcggcgccaa tcacgccgac
     3301 cgggacgatc ggcgtcttgg tctcgagcgc gagccgcatg aagccgcgac cgaagtcctt
     3361 cagttggtag cgttcggaga acggcttcga cacgccgcgc atgccctcgg gaaacaccaa
     3421 caagagctcg cccatgttga gcaagcggcg cgcgttttcg ggcagcccga ccacttgccc
     3481 catgcggctg aagaaagtcg agacgaaggg caaggtcgca gcccacttgt cgaccatcgc
     3541 gcgcgtgatg cgcggcgggt tggcgtcgaa gaagagcgcg caaccgatga tggcggcgtc
     3601 gattgggatc tgcccggaat ggttcgccac caaaatgacg cgccccgccg gcacgcggtc
     3661 cacgtcgtac acgtcggtgc gaaagtaggc gcggtggaag aaggcggacg cgagcgcggc
     3721 cgtgcggacg gcttccgggt cgaagccaaa cggatcgccg ccgagctgct cgtaacggtc
     3781 ggcgagcacc cggaagcgat cctcgaagtc cgagccgagc aggcgctcgg tgacctcacc
     3841 cgccacccgc tgcacgccgt cgaatgcacg ccggagcagc gggaggccac ggcccgtggc
     3901 cacttccgtg aggcgtgcga gcgcggtctt ctgggccatc cgaaggtccg gagttgtatt
     3961 actacccgga cgcccatgcc gcaggatttc gagcgcatcg ttccggcccc gctcgggccg
     4021 ggctcacggg tggccgtgat cgcgccggcg ggcccctgcg atcggacgct gcttttccgc
     4081 gggctcggct ggcttgcaga acgttaccgg gtcgagttcg accccagcat cgtggagcgg
     4141 cggggctacc tcgccggctc ggacgcgcgg cggctcgcgg agctcgatcg ggcattgtgc
     4201 gacccgggca tcggggcggt gctggcggcg cgaggcgggt acggcctgac gcgcatcgtc
     4261 gagcgcggaa atttcgccgc gctgcgccgg tacccgaagt ggctggtcgg gttttcggac
     4321 gtgacggcgc tgcacgtcga ggctcttcgc gccggcgtcg cctcgctcca tgcgacgaac
     4381 gtcggtgtgc tcggccaagg cgacgcccga acgcgcgatg cgttcgtgcg cgctgtggaa
     4441 gcgccggccg tgccccgcct catcgacggc ctcga
//
LOCUS       DATIML010000044         5579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5495330, whole genome shotgun sequence.
ACCESSION   DATIML010000044 DATIML010000000
VERSION     DATIML010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5579
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5495330"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..948)
                     /locus_tag="VLJ38_00685"
     CDS             complement(<1..948)
                     /locus_tag="VLJ38_00685"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSU38037.1"
                     /translation="MDPEPATRSISELLKLGLAAIPAVIAAFYGAANWSLAQLPGTRR
                     AALRDSLEGAPRAALDRYIEQRSVIEARWLVVRAIGVAVTAVLLARDLPLWLDGWAPL
                     VAALASVVVYSIPAEVLKAFATQAPERWAPWFLRLLRPVELLIAPLAATPIWLSMLVT
                     KRLEGSRTEPPPAVTGTEVELIVTEGEMAGAIDHEQSEIIRNVLEFGDVRARDVMVPR
                     TQTISFEISDPIEQILRQVADAAHSRYPVHRETVDNVVGVLHAKDLLHAVACGSASSL
                     QLEAILRPVVFVPESQSAASVLKDMRKGRHHLAIVIDEFG"
     gene            1053..1658
                     /locus_tag="VLJ38_00690"
     CDS             1053..1658
                     /locus_tag="VLJ38_00690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38038.1"
                     /translation="MVEPAASSVADARRTPGNPADKPKNQSTLQPKFAALLASARAPA
                     GASLGQWAYFGRGTTQRVEGGHGAIQVGLPVSVRHRRADDATVLDPLARSLAVPPVSL
                     LSAPVALAPAPATNVAVNELVAFEEAVRRVAWGGDRRRGVARIELGGDYAGTSIIIRG
                     EGRELSLRVEVAPGCDARDLPARLLERLEARGLCVTELEVR"
     gene            complement(1655..2554)
                     /gene="truB"
                     /locus_tag="VLJ38_00695"
     CDS             complement(1655..2554)
                     /gene="truB"
                     /locus_tag="VLJ38_00695"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HSU38039.1"
                     /translation="MIDGVFVVDKPGGATSHDLVARLRKHLGMRAVGHAGTLDPMATG
                     VLLLLAGEATKLSPYLTLEHKTYLAEVRFGVATDTDDVEGQVVRQAVLTAGSLQPDAV
                     LAALAAERERTLQTPPAVSAIQIGGERAYRLVRRGETPVLEPRAVRVMSLELRALGSD
                     RLELEVTASKGYYVRALARDLGERLGLPACLGALRRTESGGFSLAEAHAWPLAATAAP
                     LSLTEAARRCLPTAELTPDGARRAKLGQPVAPEHFESAPNPDVPSAWLEHGELVAIGS
                     VREDAYRVLRGFGPRGDAHARPR"
     gene            complement(2551..3906)
                     /locus_tag="VLJ38_00700"
     CDS             complement(2551..3906)
                     /locus_tag="VLJ38_00700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSU38040.1"
                     /translation="MKKEKPPKRARAVSKPAHPKARAAAPDSLQRSAGARANHTPAAR
                     KRRKRGAGAEESETAAGTSELESALSASDSAVSLALDDDDTLAEEAPELGLGSRMVPP
                     HIGWSDPLETAPPSARPHGDVAEQIRALEARLDGLIRSGAAVKAPEPAVPPTEALKLV
                     HQEREVVAAPADNLAESPYFEQQWGRQGLRNRSEEVDDFGLDPAFENRFRPVSEFLYR
                     RYFRIKTEGIAHVPSSGRCIIVANHSGTLPLDGLMLRTAFRLEHAAARELRWLAEDFL
                     FYLPFAGVFMNRVGAVRACQENAERLLGKDGLLAVFPEGVQGIRKLFSERYQLQRFGR
                     GGYIRLALRMQAPIVPCAIVGAEETNPLLYRLEYLAGLVGLPYIPVTPTFPLLGPLGL
                     VPAPSRWTIRFGEPVSLDGYGPQAAEDHVLVGRLSERVRGAIQAMLDNGVRERKSIWF
                     G"
     gene            complement(3903..4958)
                     /locus_tag="VLJ38_00705"
     CDS             complement(3903..4958)
                     /locus_tag="VLJ38_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU38041.1"
                     /translation="MSDERTLEHSATPGSSPLAARAPRKQIVAVTGAASFLGTNLIGV
                     LESEAQPQRILALDTKPPATAGAKTRVYELNLTSAAAEERLAEVFAAEEVDTVVHLAF
                     LPSPTHASGYSHELESVGTMHLLNACRRTRVKKLVMWSQTLLYGAHPTNPNFLSEKHP
                     LRARRTESFLADKIEAENEALRFGKPGQGRTVTILRTAPIVGPTVDNFVTRYLSHRLV
                     PTVLGFDPLWQFLHEADAIAAFRLAVVRDAPGVFNITPDGVLPLGTAIRLAGRQALPL
                     PRALAGSMAGALWVAQVAEAPPSFFDYLQYVCVADGSLAHKVMGFRPLYTSREALIDF
                     ANAQHLREVKLLSETPA"
     gene            5065..>5579
                     /locus_tag="VLJ38_00710"
     CDS             5065..>5579
                     /locus_tag="VLJ38_00710"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38042.1"
                     /translation="MVLPGQQRLGPYVLGDRLGLGGMAEVFVATKPGARGFNKKFAVK
                     RILPELARDARFVAMFCDEARICASLSHPNIVQVIDFGESDGEVFMALEYVDGLSLAR
                     LLRLVASARRRFPVPVALFIAHEVLRALDFAHSACDEQGRSLGIVHRDVSPGNVLIGR
                     TGEVKLGDFGIL"
BASE COUNT          867 a         1821 c         1980 g          911 t
ORIGIN      
        1 gccgaactcg tcgatcacga tggccagatg atggcggccc ttgcgcatgt ccttgaggac
       61 actggccgcg gattggcttt cggggacgaa gacgaccggc cgtaggatcg cctcgagctg
      121 cagggacgag gcgctaccgc aggcaacggc atgcaataag tcctttgcgt gcaggacgcc
      181 gaccacgttg tccaccgttt cgcggtgcac cgggtagcga gagtgcgccg cgtcggcgac
      241 ctgccgtaaa atttgttcga tcggatcact gatctcgaag gagatggtct gggtccgggg
      301 caccatcacg tcacgcgctc gcacgtcgcc gaattcgagc acgttgcgga tgatctccga
      361 ctgttcgtgg tcgatggcgc ccgccatttc gccctcggtg acgatgagct cgacctcggt
      421 gccggtcacg gcgggcggcg gctccgtgcg actgccttcg agccgcttcg tgacgagcat
      481 gctcagccaa atcggcgtgg cggcgagcgg ggcgatcaag agctcgaccg gacggaggag
      541 gcgtagaaac cagggagccc agcgctcggg tgcttgggtc gcgaaagcct tgagcacctc
      601 ggccgggatc gagtacacga cgacggacgc gagcgccgca acgaggggcg cccagccgtc
      661 gagccagagc ggcaggtcgc gtgcaagcag cacggccgtg acggcgacgc cgatcgcgcg
      721 caccacgagc cagcgggcct cgatgacgga gcgctgctcg atgtagcggt cgagcgcggc
      781 tcgtggcgcg ccctcgagtg aatcgcgcag cgcggcacga cgagttccag gcagctgtgc
      841 gagcgaccag ttggctgcgc cataaaaggc cgcgatgacg gccggtattg ccgcgaggcc
      901 gagcttgaga agttccgaaa tcgagcgcgt tgctggttct ggatccaatg gggctcggcc
      961 gcctgacctc tcaggcagcc tcctcagctg aaagcgtaac gaacgctctc ccccctacgc
     1021 aacccgctgc gggccggacc gatccaacga tcatggtaga accagccgct tcgtccgtcg
     1081 ccgacgcccg ccgtacgccg ggcaaccccg ctgacaaacc caagaatcaa agcaccttac
     1141 agccgaagtt tgcggccctt ctcgcgtcgg cgcgcgcacc ggcgggcgcc tcactcggcc
     1201 aatgggccta ctttggtcgg ggcacaacgc agcgcgtcga aggcggtcat ggcgcgatcc
     1261 aggtgggcct cccggtctcc gttcgtcatc gccgcgccga tgacgcgacg gtgctcgatc
     1321 cgctcgccag gagtctcgcg gtgccgcccg tctcgctgtt gagcgcgccc gtggcgctcg
     1381 cacccgctcc ggcgaccaac gttgcggtga acgaactcgt cgcgttcgag gaagccgtgc
     1441 gacgcgtggc gtggggcgga gatcgccgcc ggggcgtcgc gcggatcgag cttggcggcg
     1501 actacgcggg gacgtcgatc atcatccgcg gagaagggcg tgagctttcg ctgcgggtcg
     1561 aagtggcgcc ggggtgcgac gcgcgagatt tgccggcgcg gctcctcgag cgcctcgaag
     1621 cgcgcgggct ctgcgtgacg gaactcgaag tgcgttagcg ggggcgggca tgcgcgtctc
     1681 ctcgcggtcc aaagccacgc aggacgcggt aggcgtcttc gcgcacagac ccgatggcga
     1741 cgagctcgcc gtgttcgagc caggccgacg ggacgtccgg gttcggcgcg ctctcgaagt
     1801 gctccggtgc gacgggttgc ccgagtttcg cccggcgcgc gccgtccggg gtgagctcgg
     1861 ccgtcgggag acagcgccga gcagcctcgg tgagcgacag cggtgcggcg gtcgccgcga
     1921 ggggccacgc atgcgcttct gccagcgaaa atccgccgct ctcggtgcgg cggagcgcgc
     1981 cgaggcacgc cggcaggccg agccgttcgc cgaggtcacg ggctagtgcg cggacgtagt
     2041 agcccttgct cgccgtcacc tcgagctcga gccgatcgct gccgagggcg cgcagctcga
     2101 ggctcatcac gcggacggcg cgtggctcga gcactggcgt ctcgccgcgg cggacgagtc
     2161 ggtacgctcg ctctccgccg atctgaatgg cgctcacggc cgggggcgtt tgcagggtgc
     2221 gttcacgctc ggccgcgagc gcagcaagca cggcgtcagg ttggaggctg cccgccgtta
     2281 gcacagcctg acgcacgacc tgcccttcga cgtcgtcggt gtcggtcgcg accccgaagc
     2341 gcacctcggc gaggtacgtc ttgtgctcga gcgtgaggta gggcgaaagc ttcgtcgctt
     2401 cgcccgcgag caggagcaag acgcccgtcg ccatcggatc gagcgttccg gcgtgcccca
     2461 cggcccgcat gccgaggtgc tttcggagcc gtgcgacgag atcgtgactc gtcgcaccgc
     2521 cgggcttgtc gacgacgaac accccgtcga tcacccgaac cagatgctct tccgctctcg
     2581 tacgccgttg tcgagcatgg cctgaatggc gccgcgcacg cgttccgaga gccggccgac
     2641 gagcacgtga tcttcggcgg cttgcggccc gtagccgtcg agcgacaccg gttcgccgaa
     2701 gcgaatcgtc cagcggctcg gcgcagggac gagcccgagc ggtccgagca gcgggaacgt
     2761 cggtgtgacg gggatgtagg ggagcccgac gagcccagcg aggtactcga ggcgataaag
     2821 gagcgggttc gtttcctcgg ctccgacgat ggcgcagggc acgatcggcg cttgcatgcg
     2881 gagcgcgagg cgaatgtagc cgccgcgccc gaagcgctgc agctggtagc gctcactgaa
     2941 gagcttacgg atgccctgca cgccctcggg aaaaacggcg agcaagccgt ctttacccag
     3001 caagcgctcg gcgttttcct gacaggcacg cacggcgccg acgcggttca tgaagactcc
     3061 ggcgaacggc aggtagaaga ggaagtcttc cgcaagccag cgcagctcgc gcgccgcggc
     3121 gtgctcgagc cgaaacgccg tgcgcagcat gagtccgtcg aggggcagcg tgcccgagtg
     3181 gttcgcgacg atgatgcagc ggcccgacga cgggacgtgc gcgatgccct ccgttttgat
     3241 gcggaagtag cggcgataca gaaattcgga cacgggccga aagcgatttt cgaaggcggg
     3301 gtcgagtccg aagtcgtcga cctcttcgga acgattgcgc aggccctgcc ggccccactg
     3361 ctgttcgaaa tagggactct ccgcgaggtt gtccgctggc gcggcgacga cctcccgctc
     3421 ctgatgcacg agcttcagcg cttccgtggg cggtacggcc ggctctggcg ccttcacggc
     3481 ggcgcccgaa cggatgagtc cgtcgagccg cgcctcgagt gcgcggatct gttcggccac
     3541 gtcgccgtgc gggcgcgcgg agggcggagc cgtttcgagc ggatccgacc agccgatgtg
     3601 cggcggcacc atgcgcgagc cgagcccgag ctccggcgct tcttcggcga gcgtgtcgtc
     3661 gtcgtcgagc gcgaggctca cggccgagtc actcgccgag agcgcgctct cgagctcact
     3721 cgttcccgcg gctgtttccg actcttctgc tccagcgccc cgcttgcgcc gcttgcgcgc
     3781 cgctggtgtg tgattggcgc gcgccccggc cgagcgctgc aaggaatcgg gtgcggccgc
     3841 gcgtgctttc gggtgggcgg gcttgctcac ggcgcgcgct cgtttcggcg gcttctcttt
     3901 cttcacgcag gcgtctccga caagagcttg acttcacgca ggtgctgcgc gttcgcgaag
     3961 tctatcaacg cttcgcggct cgtgtagagc gggcgaaacc ccatgacctt gtgtgcgagg
     4021 ctgccgtccg ccacgcagac gtactgcaag tagtcgaaga acgagggcgg agcctcggcg
     4081 acttgagcga cccagagcgc gcccgccatc gagcccgcga gcgcgcgcgg cagcggcaag
     4141 gcttgcctgc ccgcgaggcg aatcgcagtg ccgagcggca acacgccgtc gggggtaatg
     4201 ttgaagacgc ccggcgcgtc gcgcacgacc gctagccgaa acgcggcgat ggcgtcggcc
     4261 tcgtgcagga actgccacag cggatcgaaa ccgagcaccg tcggcacgag acggtggctc
     4321 aagtagcgcg tgacgaagtt gtcgaccgtg ggcccgacga tcggcgcggt ccggaggatg
     4381 gtcacggtgc ggccttgccc gggcttgccg aaacgcagcg cttcgttctc tgcctcgatc
     4441 ttgtcggcga ggaacgattc ggtccggcgc gcgcgcagcg gatgcttctc ggacaagaaa
     4501 ttcggattcg tggggtgcgc gccgtagagc agcgtctggc tccacatcac gagcttcttc
     4561 acgcgcgtcc gccggcacgc gttgagcagg tgcatcgtcc cgacgctctc gagctcgtgg
     4621 gagtagccgc tcgcgtgggt gggtgaaggg agaaaggcga ggtgaaccac cgtgtccacc
     4681 tcctcggcgg cgaagacttc cgcgagccgt tcctccgcgg cggcactcgt cagattcagc
     4741 tcgtagacgc gggtttttgc gcctgccgtc gccggcggct tggtgtcgag tgcaaggatc
     4801 cgctggggtt gagcctccga ctcgagcacg ccgatgaggt tcgtgccgag gaaggatgcg
     4861 gctccagtga ccgcgacgat ctgcttgcgg ggtgcgcgtg ccgcgagagg cgatgatccc
     4921 ggggtcgccg agtgttccaa ggtgcgctcg tcactcactt tcagggctcc gaaaggccga
     4981 ccctaccaca gtgcctcacc atttcgcgtc gaggcgtgcg ttcgaggagg cggtcttcgg
     5041 acgagtcggc tagactgagc ttagatggtt ctgcccggtc aacaacgcct cggtccctac
     5101 gtactcgggg acaggcttgg gctcggcggg atggcggagg ttttcgttgc gacgaaaccg
     5161 ggcgcgcgcg gcttcaacaa gaagttcgct gtcaagcgga ttttgcccga gctggcgcgg
     5221 gatgcccgct tcgtcgcgat gttctgcgac gaggcccgca tttgcgcgag cctctcgcat
     5281 ccgaacatcg tgcaggtgat cgacttcggc gagagcgacg gcgaagtctt catggcgctc
     5341 gagtacgtcg acgggctctc gctcgcgcgg ctgctccgtc tcgtcgcgag cgcacgtcgc
     5401 aggtttccgg tgccagtcgc gctcttcatc gcgcacgagg tcctgcgcgc gctcgacttc
     5461 gcgcacagcg cgtgcgacga gcaagggcgc tcgctcggta tcgttcatcg cgacgtgtcg
     5521 cccggcaacg tcctcatcgg tcgcaccggt gaagtaaagc tcggcgactt cgggatcct
//
LOCUS       DATIML010000045         5326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4051115, whole genome shotgun sequence.
ACCESSION   DATIML010000045 DATIML010000000
VERSION     DATIML010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4051115"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1229
                     /locus_tag="VLJ38_00715"
     CDS             <1..1229
                     /locus_tag="VLJ38_00715"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSU38043.1"
                     /translation="RDFILRYKLAGSAIQSGLTLFDAGGERFFLLQVEPPARVTDADL
                     PPRDFVFIVDVSGSMIGYPLDTAKDLLQKLVGSLRPNDTFNVMLFSGGSTVLAPHSVP
                     ATKANVAKALTLLNGESGGGATELLPAMKRALELESSAGRSRSFVLVTDGYVDADKQA
                     MDLVRSHLGDANVFAFGIGSSVNRYLIEGIARAGFGEPFVVTTSTEGLAASQRFAEYV
                     RAPVLTDVRVAYDGFDAYDVEPQSVPDVLAARPVIVFGKYRGERRGSITLTGVGGQAP
                     YTQRFEVARSVPAPENRALPYLWARARIASLSDFGFGELDAAAKSQVTALGLRYSLLT
                     PFTSFVAVSHTVRNFGAPAENVDQPSPLPQGVSNSAVGEPLQTAAEPELWLVLALLGA
                     FAGFATLRARRRELSA"
     gene            1226..2089
                     /gene="xrtK"
                     /locus_tag="VLJ38_00720"
     CDS             1226..2089
                     /gene="xrtK"
                     /locus_tag="VLJ38_00720"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0043687 - post-translational protein
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exosortase K"
                     /protein_id="HSU38044.1"
                     /translation="MKTLAGFGTIAPSAFGVRPADALGALAVFGADYGLKSFASHAGA
                     RELAPLLAPTAALVTAVSGHVFNAESGAGYVSRELRVVIAPACSGMNFAIVAFTALAL
                     GFVTRFRTPRAKALWLCAAAPLAYIATVLVNALRICLALAVGHELAASGVLSAQDAHR
                     ALGVCVYLGCLLGLCALAERAFGRRAGNASRNSAARSSWMLLPLGSYVAVTVMTPLLH
                     GAARGAFWTHAAVVGGAAGFVMAVLWLTSHFVGSSERSPGRVVARTAGPAGVRFGLDV
                     PERRGERSLPG"
     gene            2064..3641
                     /locus_tag="VLJ38_00725"
     CDS             2064..3641
                     /locus_tag="VLJ38_00725"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSU38045.1"
                     /translation="MANVRYPGEESRLWFLPCIDTVVLLGAFTLLARRGRRVPPPVLA
                     ALAAFFLLVRFFRIADGISARAFERRFDLYVNLTLLPELPRLLRTTMSVWQLGLLGFG
                     VLAGMTLVGVVCYGALRVAAASLHDPDNQRLFLAAALGFVCFSLIPRELRDGFVRPPP
                     ASASGRLVAELRSIIHASGTYERERQAAASARAELSHLPNGLARLGHADVLLFIVESY
                     GETVLEDAAYVPAVRREFTAFERELGAAGYVLASNVLESPTFGGCSWFAHAALDTGIR
                     VENQHAFAALASDHPFTLADAFRAAGYRTVLAEPATERAAANYLHFDREYYASAFDYR
                     GPQLGWGKLPDQFAIDFIHRRELVDRQVPRFIQYALVTSHAPWLAEATVLDDWPRIGD
                     GSVFAALPIKRHATDWSSLDQASNAYLDAIVYDLEVLRRYLASELHNDTLVIIVGDHQ
                     PPGGVTRSSTGHGVPVHVLSRKSELIAPFLARGYASGMWPRESSRRPGMESFLFDFVR
                     DFSADLRQTSVVGGHQP"
     gene            3638..4591
                     /locus_tag="VLJ38_00730"
     CDS             3638..4591
                     /locus_tag="VLJ38_00730"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RibD family protein"
                     /protein_id="HSU38046.1"
                     /translation="MTTRPTPLKKQPNLLEHAPETVDEARAWSLLQALARRAAHGRPV
                     SRAIGLALDDGGELVELGVGRGVMTILPAQAPCFELHAPADAKVAELFDLYLPLCIGK
                     ASAKLVLGHLGQSLDGQIATSSGASRYVTGPENIRHLHRLRALFDAVIVGANTVECDD
                     PQLTTRLVAGPNPTRVVLDPHRRLAGAQVLFRDRAAPTLVLCALGSERTTSLSDIEVL
                     GIEASGELLPVSGVIAALRGRGLNRLFVEGGGVTVSRFLDARAFDRLHLTVSPVFLGA
                     GRPGVKLPGIDRLDAALRPRVRRFTLGGDVLFDCDFDDAKS"
     gene            4575..>5326
                     /locus_tag="VLJ38_00735"
     CDS             4575..>5326
                     /locus_tag="VLJ38_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38047.1"
                     /translation="MTRSPNASQAAAHRFVVPELAGPNTGGTVYNRELVGALRERGED
                     VAVLDLAEAEHAVRAGEPGSYWVDTLFLEAVPALAERCSGAQRLGLIAHYLPGLVRYG
                     ADVTRAELSREEIAALDAAPAFLAPSAFMLRTLAGLGVAERSVAVVEPGTFATGLAPL
                     PAPSATLRALVVAHLVVGKGVDRLLSALATRIEADDRLTLEIVGSVDIDSAYAAACHV
                     FSTAPSLRERVTLVGALTPTEVVARLATSDLLL"
BASE COUNT          736 a         1877 c         1762 g          951 t
ORIGIN      
        1 accgcgactt catcctgcgc tacaagctcg cgggcagcgc cattcagtcc ggcctcacgc
       61 tcttcgacgc gggcggcgag aggttcttct tgctgcaagt cgagccgccc gcgcgtgtga
      121 ccgacgccga tctcccgccg cgcgacttcg tcttcatcgt cgacgtgtcg ggcagcatga
      181 tcggctaccc gctcgacacg gccaaggacc tgctccaaaa actcgtgggt tcgctgcgcc
      241 cgaacgacac cttcaacgtg atgctgttct cgggcggctc gaccgtgctc gcgccgcact
      301 ccgtgcccgc caccaaggcg aacgtcgcga aggcgctcac gctcttgaac ggcgagagcg
      361 gcggcggcgc gaccgagctc ttgccggcca tgaagcgcgc gctcgagctc gagagcagcg
      421 cggggcgctc gcgtagcttc gtgctcgtca cggacggtta cgtggatgcc gacaagcagg
      481 cgatggatct cgtacggagc cacctcggtg acgccaacgt gttcgcgttc ggtatcggct
      541 cgagcgtcaa tcgttacctg atcgaaggca tcgcgcgcgc cgggttcggt gagccgttcg
      601 tcgtgacgac gtcgaccgaa gggctcgccg cgtcgcaacg tttcgccgaa tacgtgcgcg
      661 cgcccgtgct cacggacgtg cgcgtcgcct acgacggctt cgacgcgtac gacgtggagc
      721 cgcagagcgt gccggacgtg ctcgcggcgc gacccgtcat cgtgttcggg aagtaccgcg
      781 gggaacggcg cggctcgatc acgctcacgg gcgtcggcgg acaggcgccg tacacccagc
      841 gcttcgaggt cgcccgctcc gtccccgcgc ccgaaaatcg cgcgctgccg tacctgtggg
      901 cccgcgcgcg catcgcgagt ctctcggact tcggctttgg cgagctcgac gctgcggcca
      961 agagccaggt cacggcgctc ggcctgcgtt acagcctgct cacgccgttc acgtcgttcg
     1021 tcgccgtctc gcacaccgtg cgcaacttcg gcgcgccggc cgagaacgtc gatcagccgt
     1081 caccgttgcc gcaaggcgta tcgaacagcg ccgtcggcga gccgctgcaa accgccgctg
     1141 aaccggagct ctggctcgtg ctggcgctcc tcggggcatt cgccgggttc gcgacgctgc
     1201 gcgcgcgccg ccgggagctt tcggcgtgaa gacgctcgct ggcttcggaa cgattgcgcc
     1261 gagcgcgttc ggggttcgtc ccgcggacgc gctcggcgcg ctcgccgtgt tcggcgccga
     1321 ttacggcttg aagtcgttcg cgtcccacgc cggcgcccgc gagctcgcac cactgctcgc
     1381 gcccacggcg gcgctcgtca cggccgtcag cggccatgtt ttcaacgccg aaagcggcgc
     1441 cggttacgta tcgcgcgagc ttcgggtcgt gattgcgccg gcgtgctcgg gcatgaactt
     1501 cgcgatcgtc gcgttcacgg ccctcgcgct cggtttcgtc actcgcttca ggacgcctcg
     1561 cgccaaagca ctgtggctct gcgcggcagc gccgctcgcc tacatcgcga ccgtgctcgt
     1621 gaacgccttg cgcatctgtt tggccctcgc cgtggggcac gaactcgcgg cgtctggcgt
     1681 gctttcggcc caggacgcac atcgcgccct cggcgtctgc gtgtatctcg gctgtttgct
     1741 cggtctctgc gcgctcgccg agcgcgcgtt cggccgccgc gcaggcaacg catctcgaaa
     1801 cagcgcggct cgttcttctt ggatgctcct cccgctcgga agttacgtcg ccgtgacggt
     1861 aatgaccccg ctcctgcacg gcgcggctcg cggggcattc tggacgcacg ccgccgtcgt
     1921 gggtggggct gccggtttcg tgatggcggt gctatggctt acgtcgcact ttgttggctc
     1981 aagtgagaga tcgcctggcc gcgtggtcgc gaggacggcg gggccagctg gcgttcgttt
     2041 cggcctggac gtgcctgaac gtcgtggcga acgttcgtta cccgggtgaa gaaagccggc
     2101 tctggtttct gccgtgcatc gacacggtcg tcctgctcgg cgctttcaca ctcctcgcac
     2161 ggcgcgggcg cagggtgccc ccgccggtgc tcgcggcgct cgcggcattt ttcctgctcg
     2221 tgcgtttttt tcgaatcgcc gacgggattt cggcgcgcgc tttcgagcgc aggttcgatc
     2281 tttacgtcaa cctcacgctg ctgccggagc tgccgcgtct gctccggacg acaatgtccg
     2341 tttggcagct tggtttgttg ggcttcgggg tacttgcagg catgacgctc gtcggcgtcg
     2401 tgtgttacgg cgcgctgcgt gtcgccgcag caagcctgca cgaccccgac aatcagcggc
     2461 tttttctggc cgcagcgcta ggcttcgtct gcttctcgct gatcccgcgc gagctgcgtg
     2521 acggtttcgt gcgtccgccg cccgcgagcg cgagtggccg cctcgtggcc gagctccgct
     2581 ccatcatcca cgcgagcggc acttacgagc gcgagcggca agccgcggcg agcgctcggg
     2641 cagagctcag ccacctgccg aacggtcttg cccgcctcgg acacgccgac gtgctcctgt
     2701 tcatcgtcga atcctacgga gaaaccgtgc tcgaagacgc ggcatacgtg ccggccgtcc
     2761 gacgcgaatt cacggcgttc gagcgagagc tcggcgccgc cggctacgtc ctcgcatcga
     2821 acgttttgga atcgccgacc ttcggtggct gctcctggtt cgcccatgct gcgctcgaca
     2881 cgggcatccg cgtcgaaaac caacacgcgt tcgcagcgct cgcgagcgat caccccttca
     2941 cactcgcgga tgcgtttcgg gcggcgggct atcgcaccgt gctcgccgag cccgcgacgg
     3001 aacgagccgc cgccaactac ctgcacttcg atcgcgaata ttacgcctcg gcgttcgact
     3061 accgggggcc gcagctcggc tggggcaagc ttcccgacca attcgcgatc gacttcatcc
     3121 atcggcgcga gctcgtcgat cgtcaggtac cgcgcttcat ccagtacgcg ctcgtgacga
     3181 gtcacgcgcc gtggctcgcg gaagcgacgg tgctcgacga ctggccgcgc atcggtgatg
     3241 gctcggtgtt cgctgctctg cccatcaaac ggcacgcgac ggattggtcg agcctcgacc
     3301 aggcgagcaa cgcctacctc gacgccatcg tctacgacct cgaagtcctg cgccgctacc
     3361 tcgcatccga gctgcacaat gacactttgg tcatcatcgt cggcgaccat cagccgcccg
     3421 gcggggtcac gcgctcgagc acggggcacg gagtaccggt gcacgttttg agccgtaaat
     3481 ccgagctcat cgcgccgttt ttggcacgag gctacgcttc gggcatgtgg ccccgcgaga
     3541 gctccaggag gccggggatg gagagctttc tttttgactt cgtccgcgat ttctcggcgg
     3601 acttgcgaca aactagcgtc gtggggggcc atcaaccgtg acgacccgac cgacccctct
     3661 caagaagcag ccgaatctgc tcgagcacgc gcccgagacc gtagacgaag cgcgcgcgtg
     3721 gagtctgctt caagcgctcg cacggcgcgc ggcgcacggt cgcccggtga gtcgagccat
     3781 cgggctcgcg ctcgacgacg ggggtgagct cgtcgagctc ggcgtcggcc gcggcgtcat
     3841 gacgatcctg cccgctcagg cgccatgttt cgagctccac gcaccggctg acgccaaggt
     3901 cgcggagctc ttcgatttgt atttgccgct gtgtatcggc aaagcgagcg cgaagctcgt
     3961 cctcggacac ctgggacaaa gcctcgacgg ccaaatcgcc acctcgagcg gcgcgtcacg
     4021 ctacgtcacg ggacccgaga acatccggca cctgcaccga ctacgcgcgc tgttcgacgc
     4081 cgtcatcgtc ggcgccaaca ccgtcgaatg cgatgacccg cagctcacga cacggctcgt
     4141 cgccggtccg aatccgacac gcgtcgtact cgatccgcac cggcgcctcg ccggcgcgca
     4201 agtgctgttt cgggaccgcg ccgcgccgac gctcgtgctc tgcgcgctcg gctccgaacg
     4261 gacgacgagc ctgtccgaca tcgaggtgct cggcatcgag gcgagcgggg agcttttgcc
     4321 cgtgagcggc gtcatcgcgg cgctgcgtgg ccgcggtttg aatcggctct tcgtcgaggg
     4381 cggcggtgtc acggtgtcgc gctttctcga cgcgcgcgcc ttcgatcgcc tgcacctcac
     4441 cgtgagcccg gtttttttgg gagcgggacg gccaggcgtg aagctgccgg gcatcgatcg
     4501 gctcgacgcc gccctccggc cgcgcgtgcg gcgcttcacg ctcggcggcg acgtgctctt
     4561 cgactgcgac ttcgatgacg cgaagtccta acgcgagcca ggcggcagct catcgcttcg
     4621 tcgttcccga gctcgcgggg ccgaacacgg gaggcaccgt gtacaaccgc gagctcgtcg
     4681 gcgcgctgcg tgagcgcggc gaagatgtcg cggtgctcga cctggcggag gccgagcacg
     4741 ccgtccgcgc gggcgaaccg ggctcgtatt gggtcgacac gctgtttctc gaagccgtgc
     4801 ccgcgctcgc cgagcggtgc agcggcgcac agcgactcgg gctgatcgcg cactacctgc
     4861 cgggactcgt gcgttacggc gcggacgtca cgcgcgcgga gctttcgcgc gaggaaatcg
     4921 cggcgctcga cgccgccccc gcgttcctcg cgccgagcgc gttcatgcta cggacgctgg
     4981 ccggactcgg cgtcgcggag cgttcggtcg ccgtcgtgga accgggcacg ttcgcgacgg
     5041 gactcgcgcc gctgcctgcg ccgtccgcca cgctgcgagc gctcgtggtc gcgcacctgg
     5101 tcgtcggcaa gggcgtcgat cggctcctga gcgcgctcgc gacgcgcatc gaagccgacg
     5161 accgcctgac gctcgaaatc gtcggcagcg tcgacatcga ctcagcttac gccgccgcgt
     5221 gtcacgtctt ttcgaccgcg ccgtccctgc gcgaacgcgt gaccctggtc ggcgcgctca
     5281 caccgaccga ggtcgtcgca cgcctcgcga cgagcgacct cttact
//
LOCUS       DATIML010000046         5596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_875382, whole genome shotgun sequence.
ACCESSION   DATIML010000046 DATIML010000000
VERSION     DATIML010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5596
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_875382"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1260
                     /gene="gcvPB"
                     /locus_tag="VLJ38_00740"
     CDS             <1..1260
                     /gene="gcvPB"
                     /locus_tag="VLJ38_00740"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HSU38048.1"
                     /translation="YPLGSCTMKHNPKVNEWAARLPGFAQAHPLMPPHLIAGALELMV
                     ALQAQIAEITGMDGVSLQPAAGAQGELTGLMMIRAHHQASGRAPRKVFIPDSAHGTNP
                     ASSSLNGFESVAFASGPNGVVEPETLLRALDAAPGDVAALMMTNPNTLGLYEQAMPKL
                     TELVHARGGLVYGDGANMNAVLGRARPGDAGVDVIQLTLHKTFTTPHGGGGPGSGPVA
                     FKQVLAPYQPVPVVRQDGARVVVEHETPGSVGRVRSFFGNFGMMVRAYTYMRELGPEG
                     LANVSNLAVLNARYLAARLAEHYPLAYDTPSLHEAVFTDRELEAQTGVKTLDVAKRLI
                     DYGVHPPTVYFPLVVRGALMVEPTETETKQTLDAFVEAMVSIAREARETPEVVKTAPH
                     LTRLGRLDEARAARKPRLRWTREPSGG"
     gene            1325..2095
                     /locus_tag="VLJ38_00745"
     CDS             1325..2095
                     /locus_tag="VLJ38_00745"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HSU38049.1"
                     /translation="MNELPTLVSLHYSPWSERARWALDHHELAYRLVQHAPFLGERRL
                     RKLAGPRPGRVTVPLLLAGGEALMNSFEIARFADRHGRAEPLLPETLEPELCELNALV
                     EHAMMEGRSLTTAALLQDHAALEEALPRGVPAFLRPLLWPVSSFGTRWFARKYGLDLV
                     EREKPLAALAGALCHVRERYVGRSYFFDRFSYADILVCSLLQAISPVSDRYIRLGPAW
                     RRAWTIPELATEFGELLTLRDELYARHRKRRVASAPAR"
     gene            complement(2175..2618)
                     /locus_tag="VLJ38_00750"
     CDS             complement(2175..2618)
                     /locus_tag="VLJ38_00750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38050.1"
                     /translation="MASTPFRQSGRASGMLWAALVLAVDCFGCSADDSPPNQPASALT
                     TGSKCPDPASPSVTYRSWAQGFFESYCTRCHSSTLVTNSERSGATPHANWDDLPTIKA
                     YAGEIDADAAGGPNGINRVMPPSDPRPSDDDRSKLGEWLACGAPE"
     gene            2750..4168
                     /locus_tag="VLJ38_00755"
     CDS             2750..4168
                     /locus_tag="VLJ38_00755"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38051.1"
                     /translation="MSQSPVKVGDVVGGRYRIDRLLGAGSMGFVVGAWHLELDQPVAL
                     KLLNPDIFEQGEAAARFRRECRAAARVKSEHVCRVIDVGSLEQGAPYMVMELLDGNNL
                     EEELLRRGALPVAEAVGYILEAVEAIAEAHAAGIVHRDLKPANLFIARRADRSRLLKV
                     LDFGISKSMIDSHGPGDMSLTRTGVIIGSPLYMSPEQMRSTKDADTLSDIWALGAILF
                     QLVTGRPPYEGESIPELCAKLFSEDAPPPSAVRAGLPAGLDAVLHRTLARDPTKRFQN
                     VAELGAALLEFNPGCRVHVERARRVLAARDGRPTSVAPGPASSDSPTIQASVSAVALW
                     GQLSGRERRRRYGLVAAVLVACGVGGFALWQKRGVPSAASENVATAPTLEPVAPIAAP
                     AAAAGPAAVTVQPADGAVPSLSSIVAAASASEGASAAPPNAAAASVSATKRPALVVAR
                     PRGTATAAKADSVSITDFGGRR"
     gene            4304..5353
                     /locus_tag="VLJ38_00760"
     CDS             4304..5353
                     /locus_tag="VLJ38_00760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38052.1"
                     /translation="MARSCWLMGALAGCLLLAATPAAAADSAADKASAEALFDAALQL
                     MKQGNYAEACPKLENSQRIDPGVGTLLYLAECYERVGRTASAWATFREAASQAEASGQ
                     AKRAKAARERIAKLEPDLSYLTIEVAEGTRTLLGLHIRRDGAELGTGIIGAAVPVDPG
                     PVKVEVSAPEHESFTVTVRIQPRARQTVLIPTLAHVESPHGVDALPLAAVPLADQGPT
                     PASPSQVPPPAPSAAPAKSDGSVQRVIGISVAGLGLVGIGVGTYFGFSAMSSEKKADQ
                     ECTPTQCQEQTGLNDSTDAHHKATASNVAFAVGGGLVAVGAVVYFTAPHQASSVGVAP
                     VFAPGFAGVSLGGRL"
     gene            5350..>5596
                     /locus_tag="VLJ38_00765"
     CDS             5350..>5596
                     /locus_tag="VLJ38_00765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38053.1"
                     /translation="MSGFGLPSFQRVSALLIALAIPFAFGSCQSIAGIDDRELGPCGH
                     YCDVVMANCNGKNAQYGSRTKCLAMCQFYAVGDDVEWQ"
BASE COUNT          857 a         1939 c         1912 g          888 t
ORIGIN      
        1 tacccgctcg gctcgtgcac gatgaagcat aaccccaagg tgaacgagtg ggcggcgcgc
       61 ttgcccggct tcgcgcaagc gcacccgctc atgccgccgc acctgatcgc gggcgcgctc
      121 gagctcatgg tcgcgctgca agcgcagatc gccgagatca cgggcatgga cggcgtgagc
      181 ctccaacccg cggcgggcgc gcagggtgag ctcacgggac tcatgatgat ccgcgcgcac
      241 caccaagcct ccgggcgcgc gccgcgcaag gtgttcattc ccgacagcgc ccacggcacc
      301 aatcccgcga gctcgtcctt gaacggcttc gagtccgtcg cgttcgcttc cggcccgaac
      361 ggcgtcgtcg agcccgagac gctcttgcgc gcgctcgacg cggcgcccgg cgacgttgcc
      421 gcgctgatga tgacgaaccc gaacacgctc ggcctctacg agcaggcgat gcccaagctc
      481 accgagctcg tgcacgcgcg cggcggcctc gtttacggcg acggcgccaa catgaacgcc
      541 gtgctcggtc gcgctcgccc cggcgacgcg ggcgtcgacg tgatccagct gactctgcac
      601 aagacgttca cgacgccgca cggcggtggc ggccccgggt ccggcccggt ggcgttcaag
      661 caggtgctcg cgccgtacca gcccgtgccc gtcgtgcgcc aagacggcgc gcgggtcgtg
      721 gtcgaacacg agacgccggg gagcgtcggc cgcgtgcgct cgttcttcgg taacttcggc
      781 atgatggtgc gcgcgtacac gtacatgcgc gagctcgggc cggagggact cgccaacgtg
      841 agtaacctcg ccgtgctcaa cgcccgttac ctcgcggcgc ggctcgccga gcattacccg
      901 ctcgcctacg acacgccgtc gctccacgaa gccgtattca ccgatcgcga gctcgaggcg
      961 caaaccggcg tgaagacgct cgatgtcgcc aagcggctca tcgattacgg cgtgcacccg
     1021 cccacggtgt actttccgct cgtcgtgcgc ggcgcgctca tggtcgagcc gaccgagacg
     1081 gagacgaagc agacgctcga cgccttcgtc gaggccatgg tgtcgatcgc gcgtgaggcg
     1141 cgcgagacgc ccgaggtcgt gaagaccgcg ccgcacctca cgcggctcgg ccgcctcgac
     1201 gaggcgcgcg ccgcccgcaa gccgcgcctg cgctggaccc gcgagccgag cggaggctga
     1261 gcgcgccgcg cgcttcgtgc cgcgggagcc cgcgtccgag aaatggcgct atgacctgcg
     1321 gccgatgaac gagctcccga cgctggtttc gctccactat tcgccctggt ccgagcgcgc
     1381 gcgctgggcg ctcgatcacc acgagctcgc ctatcgcttg gtgcagcacg cgccgttcct
     1441 cggcgagcgg cgcctccgaa agctcgcggg gccgcgaccg ggtcgcgtca cggtgccgct
     1501 cttgctcgcc ggcggcgaag cgttgatgaa cagcttcgag atagcgcgtt tcgccgaccg
     1561 tcacggccgc gccgagccgc tcttgcccga gacgctcgag ccggagctct gcgagctcaa
     1621 cgcgctggtc gaacacgcga tgatggaggg gcggagcctc acgaccgcgg cgctacttca
     1681 ggatcacgct gcgctcgagg aagcgttgcc gcgcggcgtg cccgcgttct tgcgcccgct
     1741 gctgtggcca gtgtcgagct ttggcacgcg ctggttcgcg cgcaaatacg ggctcgacct
     1801 cgtagagcgc gaaaagccgc tcgcggcgct cgccggcgcg ctctgccacg tgcgcgagcg
     1861 ctacgtcggg cgctcgtact tcttcgatcg cttcagctac gccgacatcc tcgtctgctc
     1921 gctgctgcaa gcgataagtc ccgtgagtga tcgttacatt cggctcggcc ccgcgtggcg
     1981 acgcgcctgg acgatcccgg agcttgcgac cgaattcggt gaactcctca cgttgcgcga
     2041 cgagctctac gcgcgtcacc gcaagcggcg cgtggcgtcg gccccggcgc gctgaacccg
     2101 ccccgtgagc gcgaaagaac gtgcattttg tttggtgccc atgaggcaat gctctactga
     2161 cgcgccggca agagtcactc cggcgcgccg cacgcgagcc actcgccgag cttgctgcgg
     2221 tcgtcgtcgc tcggcctcgg atccgacggc ggcatgacgc ggttgatgcc gttcggcccg
     2281 cccgccgcgt cagcgtcgat ctcgcccgca taggctttaa ttgtaggaag atcgtcccag
     2341 tttgcgtgag gagtcgcgcc gctccgttcg gaattcgtga cgagcgtcga actgtgacag
     2401 cgcgtgcagt acgactcgaa aaagccctgc gcccaactcc gataagtgac ggacggcgac
     2461 gccggatcag gacacttcga gcccgtggtg agcgcgctcg cgggctgatt cggcggagaa
     2521 tcgtcagcgg aacagccgaa gcaatcgaca gcgagcacga gcgcagccca cagcatcccg
     2581 ctcgcgcgcc cgctctgccg aaacggagtt gaagccatcg acgagctaga ttcgcgagca
     2641 gcgtaagagg ttcccatgac ggccgcgggc tcctcgtgag gaggggccgg ggagtctcgg
     2701 gcgggcgcct tttgacatgc tcgacgcaag gcgtaacatg gcaaattgat tgtcacagtc
     2761 gcccgtcaaa gtcggagacg tcgtcggtgg gaggtaccgc atcgaccgct tgctcggtgc
     2821 ggggagcatg ggcttcgtcg tcggggcctg gcacctcgag ctcgatcagc cggtcgcgct
     2881 caagctcttg aaccccgaca tcttcgagca gggtgaggcg gcggcgcgct ttcggcgcga
     2941 atgtcgcgcg gcggcgcgcg tcaagagcga gcacgtctgc cgtgtcatcg acgtgggttc
     3001 gctcgagcag ggcgcgccgt acatggtgat ggagctgctc gacggcaaca acctcgagga
     3061 agagctgctc cggcgcggcg cgctgcccgt agcggaggcc gtcggctaca tcctcgaagc
     3121 cgtggaggcg atcgcggaag cgcatgccgc cggcatcgtg catcgcgatc tgaagccggc
     3181 gaatctgttc atcgcccgcc gcgccgaccg ctctcgcctg ctcaaggtcc tcgacttcgg
     3241 gatctcgaag tcgatgatcg acagtcacgg tccgggcgac atgtcgctca cgcgcacggg
     3301 cgtcatcatc gggtcgccgc tgtacatgtc gcccgagcag atgcgctcga ccaaggacgc
     3361 cgacacgttg agcgacatct gggcgctcgg cgcgatcctc tttcagctcg tcacggggcg
     3421 tccgccttac gaaggcgaga gtatccccga gctttgcgcc aagctgttca gcgaggacgc
     3481 gccgccgccg agcgccgtgc gcgccggctt gccggcaggg ctcgacgccg tgctgcatcg
     3541 cacgcttgcc cgcgacccta ccaaacgctt tcaaaacgtc gcggagctcg gcgcggcgct
     3601 gctcgagttc aaccccggct gtcgcgtgca tgtcgagcgt gcgcggcgcg tgcttgccgc
     3661 gcgcgacgga cgtccgacct ccgtggcacc cgggcccgct tcgagcgact cacccacgat
     3721 tcaggcgtcg gtgtccgccg tcgcgctttg gggtcagttg agtggccgcg agcgccgccg
     3781 ccggtacggc ctcgtcgccg ccgtgctggt tgcctgcggc gtgggtggct tcgcgctctg
     3841 gcaaaaacgc ggcgtcccga gcgccgccag cgaaaacgta gcgacggcac cgacgctcga
     3901 acccgtcgca ccaatcgcgg cgcccgcggc cgccgcgggt ccggctgccg tcaccgtgca
     3961 gcctgccgac ggcgctgtgc cgagcctgtc gagcatcgtc gctgcggcga gtgcatccga
     4021 aggagcgagc gcggctccgc cgaacgctgc tgcggcgagt gtcagcgcga cgaagcgacc
     4081 agccctggtc gtcgctcgcc cacgtggcac cgcgacggcc gcgaaggccg attcggtttc
     4141 catcaccgac ttcggcggtc gacgctgagc gtgcgtcgtc gtccggagct ggccggccgg
     4201 tgcagctgcg ctcgcgcgcg agtccgaccc cgtctcgaaa ccgagtgagc tttgcgcgag
     4261 gtgatcgcgt ctcgcgcagt atcgatgtag gctcggcccg acgatggcaa ggtcttgctg
     4321 gttgatggga gccctcgccg gttgtttgct gctcgcggca acgccggccg ctgctgcgga
     4381 ctccgcggcg gacaaagcat cggccgaagc gctgttcgat gccgcgcttc agctcatgaa
     4441 gcaggggaat tacgcggagg catgtcccaa actcgagaac agccaacgca tcgatccggg
     4501 cgtcggtacg ctgctctacc tcgctgagtg ttacgagcgc gtcggtcgta ccgcgagcgc
     4561 gtgggcgacg tttcgcgagg cggcgtcgca agccgaagcg tcgggacaag ccaaacgcgc
     4621 caaggccgcg cgcgagcgca tcgccaagct cgaacccgac ctgtcctatc tgaccatcga
     4681 agtcgccgag ggtacgcgca cgctcctcgg gttgcacatc cgtcgcgacg gcgccgaatt
     4741 gggcacgggg atcatcggcg ccgcggtgcc ggtggatccg ggcccggtga aggtggaggt
     4801 cagcgcgccc gagcacgagt cgttcaccgt gacggtgcgc attcagccgc gcgcgcgaca
     4861 gacggtcctg atcccgacgc tcgcgcacgt cgagtcgccg cacggcgtcg acgccctacc
     4921 gctcgccgcg gtgccgctcg ccgaccaagg accaacgccg gcctcaccgt cgcaggtccc
     4981 gccgccggcg ccttcagccg cgcccgcgaa gagcgacggc agcgttcagc gcgtcatcgg
     5041 cataagcgtc gccggtctcg gcctcgtggg catcggcgtg ggcacgtact tcggcttctc
     5101 ggccatgtcg tcggagaaaa aggcggacca agagtgcacg ccgactcagt gccaagagca
     5161 gacgggcctg aacgattcga ctgacgcgca ccacaaggct acggcgtcga acgtcgcgtt
     5221 cgccgtgggc ggcgggctcg tggctgtcgg cgcggtcgtc tacttcacgg cgccgcacca
     5281 agcatcgagc gtcggagtcg cgccggtctt tgcgcccggg ttcgcgggtg tgagcttggg
     5341 aggccggcta tgagcggttt cggattgccg tcgttccagc gcgtttcggc gttgctcatc
     5401 gcgctcgcga ttccgttcgc gttcggcagc tgccagagta tcgccggcat cgacgaccgc
     5461 gagctcggcc catgcggcca ctactgtgac gtggtgatgg cgaactgcaa tggcaagaac
     5521 gcccagtacg ggtcgcgcac gaaatgcctc gccatgtgcc aattctatgc ggtcggtgac
     5581 gacgtcgaat ggcagg
//
LOCUS       DATIML010000047         2423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4629700, whole genome shotgun sequence.
ACCESSION   DATIML010000047 DATIML010000000
VERSION     DATIML010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4629700"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1659)
                     /locus_tag="VLJ38_00770"
     CDS             complement(<1..1659)
                     /locus_tag="VLJ38_00770"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38054.1"
                     /translation="MPKWFPSFKRGSATAVAREPTISRAPLSSAAALAGDDDDLVGKN
                     LNGTYVIESVLGEGGMGRVYRARHTRIPSKQFAIKVLRPEFTRNPEVVTRFRREAEAA
                     ACISHPNVVGVYDVDMTAEGHSYLVCEYLIGHDVADEIATHGPLTIPEAVHVAVQVCK
                     ALEAAHARGVVHRDLKPHNVFLLADENGQMPPRPAVRVLDFGLSRFVDAPGTQLTQTG
                     VIMGTPAYMAPEQADGTGVDARTDIYGLGAVLFAALCGRPPFEAETLQAVVLAVLSQE
                     APRVRTLKPSIPENLELVIQRAMMRRREERYQSMAELRRALEPFLAADELEIVELDGP
                     ARAMQQSSRSMLEADQRAVSTARPRLLLYGALALALLVAGISSTLPALELVTGKLTFT
                     HSEVALFLVAVVGTLITPTLLLFARMRRSVWGTHSRVLALLHTLRGAVAAGVLSYGLS
                     AIAVRFLDDVVGRMFTLPALGHGAGQAWPGWNLLFLIIALVTSGVTGARIGIERTSSG
                     ILRRVTPVLSIAGACVCLFILYAGFVWRSQSPEPRVSPRPTPEQA"
     gene            complement(1725..>2423)
                     /gene="maiA"
                     /locus_tag="VLJ38_00775"
     CDS             complement(1725..>2423)
                     /gene="maiA"
                     /locus_tag="VLJ38_00775"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HSU38055.1"
                     /translation="AIRRRRPQPVRRDRAGGDVMRLYSYWRSSSAWRARLALAYKRLP
                     HELVTVHLTKGQQNEPEFRKINALGQVPVLETEEDGAPLRITQSVAIIEYLEERFPER
                     ALLPAVRRDRARARELAEIVNSGMQPMQNLSLQRAVEQSGGDVSALRKQALDKGLTAL
                     ERLASESAGRFLVRDGVTLADIYLVPQISSARRFDVDLEPFPTLRRVEAECAALAEFQ
                     SAHPNAQPDFEPAV"
BASE COUNT          415 a          838 c          796 g          374 t
ORIGIN      
        1 ggcctgctcg ggcgtcggac ggggcgacac tcgaggttcc ggcgactgac tccgccacac
       61 gaagccggcg tacaaaatga acaagcagac gcacgccccc gcgatcgaca aaacgggcgt
      121 tacgcgccgc aagatccccg agctcgtccg ctcgatgccg atgcgcgctc ccgtcacgcc
      181 gctcgtcacg agcgcgatga tcaaaaacag cagattccag ccgggccagg cttgccccgc
      241 gccgtgcccg agcgccggca gggtgaacat gcgcccgacc acgtcgtcca aaaaacgcac
      301 ggcaatggcg gagaggccgt agctcaagac gcctgccgcg acggcgccgc gcagggtatg
      361 caagagggcg agcacgcgcg aatgagtgcc ccacacgctg cgccgcatgc gcgcgaagag
      421 gagcagcgtc ggcgtgatca gcgtccccac gaccgcgacg aggaacagtg cgacttccga
      481 gtgcgtgaac gtgagcttgc ccgtgacgag ctcgagcgcg ggcagcgtgc tcgagatccc
      541 ggcgacgagc agcgcgagcg cgagagcgcc gtacaaaagc agccgcggtc gcgccgtgct
      601 caccgcgcgt tggtccgcct cgagcatcga gcgcgagctc tgctgcatcg cgcgcgccgg
      661 gccgtcgagc tcgacgatct cgagctcatc cgcggccaaa aatggctcga gcgcgcgccg
      721 gagctcggcc atcgactgat agcgctcctc gcgccggcgc atcatggcgc gctgaatcac
      781 gagctcgaga ttctccggga tcgaaggctt caacgtgcgg acgcgcggcg cctcttgcga
      841 gagcacggcg agcacgactg cttgcagcgt ttccgcttcg aacggcggcc ggccgcagag
      901 cgccgcgaac agcaccgcgc cgagcccgta gatgtccgtg cgcgcgtcga cgcccgtgcc
      961 gtcggcttgt tccggcgcca tgtacgctgg cgtccccatg atcacgccgg tctgcgtcag
     1021 ctgcgtcccc ggcgcatcca cgaagcgcga aagcccgaaa tcgagcacgc gcaccgcggg
     1081 ccggggcggc atttgcccat tttcatccgc gagcaagaac acgttgtgcg gcttgagatc
     1141 gcgatgcacg acgccacgcg cgtgcgcggc ttcgagcgct ttgcacacct gcacggcgac
     1201 gtggaccgcc tccgggatcg tgagcggacc gtgcgtcgcg atctcgtccg ccacgtcgtg
     1261 accgatcaag tactcgcaga ccaagtacga gtgcccttcg gctgtcatgt cgacgtcgta
     1321 gacgcccacg acgttcggat gcgagatgca cgccgccgct tccgcttcgc gccgaaaacg
     1381 cgttacgacc tcgggattgc gcgtgaattc ggggcgcagc accttgatcg cgaactgctt
     1441 gctcgggatg cgcgtgtgac gcgcgcggta cacgcgcccc atcccgcctt cgccgagcac
     1501 ggactcgatc acgtacgtgc cgttcaggtt cttgccgacg agatcgtcgt cgtcacccgc
     1561 gagcgctgcg gcggacgaca gcggcgctcg cgaaatggtg ggctccctgg ctacggccgt
     1621 cgcgctgccg cgcttgaacg atgggaacca cttcggcatc acggacacag cgatggggtt
     1681 agcagtctac cgagggtacc gaacgtcagc catcccgcag gacttcacac cgccggttcg
     1741 aaatccggct gtgcgttcgg gtgagcagac tggaattcgg cgagcgcggc gcactccgct
     1801 tccacgcgcc gcagcgtggg gaacggctcg aggtccacgt cgaagcgccg cgccgaagag
     1861 atctgcggca cgagatagat gtcggccaag gtcacaccat cgcgcaccaa aaagcgcccc
     1921 gcactctcgc tggcgagtcg ctcgagcgcg gtgagtccct tgtcgagcgc ctgcttgcgg
     1981 agcgcgctca cgtccccgcc cgactgctcg acggcgcgct gcagcgacaa gttctgcatc
     2041 ggctgcattc cggagttcac gatctcggcg agctcgcgcg cccgcgctcg gtcgcgccgc
     2101 acggccggca agagcgctcg ttcgggaaag cgttcttcca agtattcgat gatcgcgacg
     2161 gactgcgtga ttcgcagcgg agctccgtcc tcttcggttt cgagcacggg cacctgaccc
     2221 agcgcgttga ttttgcggaa ttccggctcg ttttgctggc ccttcgtgag gtgcaccgtc
     2281 acgagctcgt gcgggagccg tttgtaagcg agcgcgagcc gggcgcgcca ggccgagctg
     2341 cttcgccaat aactgtagag tcgcatcacg tcaccacctg ctcgatcgcg ccgcacgggc
     2401 tgcggccgcc ttcgtcgaat agc
//
LOCUS       DATIML010000048         3496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2030346, whole genome shotgun sequence.
ACCESSION   DATIML010000048 DATIML010000000
VERSION     DATIML010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3496
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2030346"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..538
                     /locus_tag="VLJ38_00780"
     CDS             <1..538
                     /locus_tag="VLJ38_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38056.1"
                     /translation="GFIARFTKDGDHVRSERFGGKIFDEGAVLTPLSSGDVLVAGMLS
                     GPATIGGKSVAASDKGSAFLARIGDDDQAAWVGLAGDGYVWTVAADPDEGMFHVAGDL
                     GSERWLTEFRADGSQVFAAGRPANDLFFTTSMAVDSGLGVWLSGGFMGMADFGGGTVL
                     TSSDAGVFLVRLERNGAP"
     gene            complement(560..1969)
                     /locus_tag="VLJ38_00785"
     CDS             complement(560..1969)
                     /locus_tag="VLJ38_00785"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HSU38057.1"
                     /translation="MTSARRETKPRVAQAARQAPFALGVLLVALGAAAFAIAFRSALT
                     TTLRTLAGAGDVVSAMRRAPVWVRLFAPALGGLLAGLVGMLVARAPGGRGVGDVMEAV
                     VLGRVRLSMRVTLLKSLASFCAIVSGGSLGREGPLIQFGGAIGKFVSDKLGLSTRDAR
                     RLIAAGTAAGFAAAYNTPFAAVLFVLEVVTGVVVLDAILPALVATVVATALTRAVVGQ
                     GPIYGQRSFQLQAPSELLALAGLGVVTAFGAQAFMRLLSFGESSFRKRRLALPWRPAL
                     GGLLAGAIIVALPDVAGNGYEPLNTLLDGRFAPNFVIWLLLGKCLATTASVSSGSPGG
                     VFTPTLLVGGALGLLYAHALDALGVHVGLPGGYALVGMAAATGATTHAPLMGAVMVFE
                     LSGDYAIALPLVLATALSTLVSRALRHDSVYTAELRERGLGWELTFEGRVLDPRSRAS
                     SVPPSSSGGQASAKLDTRP"
     gene            complement(2034..2840)
                     /locus_tag="VLJ38_00790"
     CDS             complement(2034..2840)
                     /locus_tag="VLJ38_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38058.1"
                     /translation="MKALVRALAQVLTGGALVLLARGARAQQDDQVYHWETPDTGWFE
                     LQMLNAFVLASDTPYRRFSGAETRQGLEQHFVEVEYGLTDRWSAGVYADFELPPSDTF
                     RYSGVRVESNYRLFDRYQRIVELALHAEVLVPRPSSGAGEELETRLILQRDFSDLRVI
                     ANPGFALPLSGDTSEGIEFSVAAGIYYRRFWRVQPALEYFAEFGSVAEPSPASEQRHV
                     LYPGARVYLAPGLSWLVSVGIGLNDASDRWLLRGLLSYEFPTVRPADQMR"
     gene            complement(2837..>3496)
                     /locus_tag="VLJ38_00795"
     CDS             complement(2837..>3496)
                     /locus_tag="VLJ38_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38059.1"
                     /translation="LAKAGPYRVQISVEPARMRRHDPTNGDRYEKPVFADIAWLTADR
                     APPRVDDASRLSFALAQGAAYRRSLATMSDGVAVDGASQRVGDYVVAYAVEFAEGYWY
                     LANGSLKYAQRVEESAELNAHVEVSVMDAETGRFLPGLAVTATLYKDGERVGSEREPF
                     MWHPWVYHYGMNWRVRGAGRYALEVAFERPPYAAAGAPRRFASGGRVRFDAVDLAVGQ
                     K"
BASE COUNT          578 a         1200 c         1232 g          486 t
ORIGIN      
        1 cggcttcatc gctcgcttca ccaaggacgg tgaccatgtc cggagcgagc gcttcggcgg
       61 caaaatcttc gacgaaggcg ccgtgctgac gccgctctcg agcggtgatg ttctggtcgc
      121 cggcatgctg agcggtccag caacgatcgg cggcaagagc gttgcggcgt cggacaaggg
      181 ttcggcattc ctcgcgcgca tcggcgacga cgaccaagcg gcctgggtcg gcctcgcggg
      241 cgacggctac gtctggacgg tcgccgcgga tcccgacgag ggcatgttcc acgtcgcggg
      301 cgatctcgga tcggagcgtt ggctcacgga gtttcgtgcc gacggctcgc aagtgtttgc
      361 ggcgggccga ccggcgaacg atctgttttt tacgacgtcg atggccgtcg acagcggact
      421 cggggtttgg ttgagcggcg ggttcatggg catggcggac ttcgggggcg gcacggtgct
      481 cacgagttcg gacgccggcg tgttcctcgt gcggctcgag cgcaacggcg cgccgtgagc
      541 gccctcgttg gcggcgggtc tacggccgcg tgtcgagctt cgcggacgct tggccgccac
      601 tcgagctcgg cggcacgctc gaggctcgcg agcgcgggtc gagcacgcgc ccctcgaacg
      661 tgagctccca gccgagaccg cgctcgcgga gttcggccgt gtacacggag tcgtggcgta
      721 aggcgcgcga gaccagcgtc gagagggccg tcgcgagcac gagcggcaac gcgatcgcgt
      781 agtcgccgga cagctcgaac accatgacgg cgcccatgag cggcgcgtgc gtggtcgcgc
      841 cggtcgctgc cgccatgccg acgagcgcgt agccgcccgg taggccgacg tgtacgccga
      901 gtgcgtcgag cgcgtgggcg tagagtagac cgagcgcgcc gccgaccagc aacgtcggcg
      961 tgaacacgcc gcccgggctg cccgaggaga cggacgccgt cgtggcgagg catttgccga
     1021 gcagcagcca aatcacgaaa ttcggcgcaa agcggccgtc gagcagggta ttgagcggtt
     1081 cgtaaccgtt gcccgccacg tcgggcaacg ccacgatgat cgcgcccgca agtagccctc
     1141 cgagcgccgg ccgccaaggc aacgcgaggc gtcgtttgcg gaacgagctt tccccgaacg
     1201 agagcaggcg catgaaggct tgcgcgccga acgccgtgac cacgccgagg ccggcgaggg
     1261 cgaggagctc gctcggagcc tggagctgaa acgagcgctg gccgtagatc ggtccctgtc
     1321 cgacgacggc gcgcgtgagc gccgtggcga cgacggtcgc gacgagcgcg ggcaaaatcg
     1381 cgtcgagcac cacgacaccc gtcacgacct cgagcacgaa gagcacggcc gcgaacggcg
     1441 tgttgtacgc cgccgcgaag cccgcggccg tgcccgccgc gatcagccgc cgcgcgtcgc
     1501 gcgtcgaaag cccgagtttg tcgctcacga acttgccgat ggcgccgccg aactggatca
     1561 gcgggccctc gcggccgagc gaaccacccg aaacgatcgc gcagaacgag gcgagtgatt
     1621 tcaagagcgt cacgcgcatg gagagccgca cgcgcccgag cacgaccgcc tccatcacgt
     1681 cccccacgcc gcgtccgccc ggcgcgcgcg cgacgagcat tccgacgagc cccgccaaga
     1741 gcccgccgag cgcgggcgcg aacaggcgta cccacacggg cgcacgccgc atggccgaaa
     1801 ccacgtcgcc cgcgcccgcc agcgtgcgga gcgtcgtcgt gagcgccgac cgaaacgcaa
     1861 tcgcgaacgc ggcggcgccg agcgcgacga gcagcacgcc gagcgcgaac ggcgcttggc
     1921 gcgccgcctg cgcgaccctc ggtttcgttt cgcgccgcgc gctcgtcatg gtctcgagag
     1981 aaagggcgcg agactctact actttcgtcc cgccgaagct ttggccccct ccctcaacgc
     2041 atctgatcgg ccggacgcac cgtcggaaat tcgtagctca aaagcccgcg caagagccag
     2101 cgatcgctcg cgtcgttcaa gccgatgccc acgctcacga gccagctcaa gcccggcgcg
     2161 agatacaccc gtgcgcccgg gtaaaggacg tgacgctgct cgctcgcggg cgaaggctcg
     2221 gcgacggaac cgaattcggc gaagtactcg agcgcgggct gcacgcgcca gaagcgccgg
     2281 tagtaaatgc cggccgccac cgagaactcg atgccctcgc tcgtgtcgcc gctgagcggc
     2341 agcgcgaagc cgggattcgc gatcacgcgc agatccgaga agtcgcgttg caggatcagc
     2401 cgcgtttcga gctcttcccc cgcgcccgag ctcggacgcg gcacgagcac ctcggcgtgg
     2461 agcgcgagct cgacgatgcg ctggtagcga tcgaaaaggc ggtagttcga ttcgacgcgc
     2521 acgccggagt agcgaaaggt gtcggacggc ggcagctcga aatccgcgta cacgcccgcg
     2581 ctccagcgat cggtgaggcc gtactcgact tcgacgaagt gttgctcgag gccctggcgt
     2641 gtctcggcgc ccgagaagcg gcggtatggc gtgtcgctcg cgagcacgaa ggcgttcagc
     2701 atctggagct cgaaccagcc cgtgtcgggc gtttcccagt gatagacttg gtcgtcctgt
     2761 tgagcgcgcg cgccccgcgc gagcaggacg agcgcgccgc ccgtgaggac ctgtgccaga
     2821 gcacgcacga gggccttcat ttctggccca ccgcgaggtc gacggcgtcg aagcgcacgc
     2881 gcccgccgct cgcgaagcgc ctgggcgcac ccgcggcggc gtacggcggg cgttcgaacg
     2941 cgacttcgag cgcgtaacga ccggcgccgc gcacgcgcca attcatcccg tagtgataga
     3001 cccacgggtg ccacatgaac ggctcccgtt cgctgccgac gcgctcgccg tctttgtaga
     3061 gcgtcgccgt gaccgcgagg cccggtaaga atcgccctgt ctccgcgtcc atgaccgaga
     3121 cttccacgtg cgcgttcagc tcggcgctct cctcgacgcg ctgggcgtac ttgagcgagc
     3181 cgttcgcgag gtaccaatag ccttcggcga attcgacggc gtatgcgacg acgtaatccc
     3241 ccacgcgctg acttgccccg tcgacggcga cgccgtcgga catcgtggcg agcgaacgcc
     3301 ggtaggccgc gccttgcgcc agcgcgaaag agagccgcga agcgtcgtcg acgcgcggcg
     3361 gcgcgcgatc ggcggtgagc cacgctatgt cggcgaacac gggcttttcg tagcgatcgc
     3421 cgttcgtggg atcgtggcgg cgcatgcgcg cgggctccac cgagatctgc acgcgatagg
     3481 ggcccgcttt ggcgag
//
LOCUS       DATIML010000049         5887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2319997, whole genome shotgun sequence.
ACCESSION   DATIML010000049 DATIML010000000
VERSION     DATIML010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5887
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2319997"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..966
                     /gene="panC"
                     /locus_tag="VLJ38_00800"
     CDS             76..966
                     /gene="panC"
                     /locus_tag="VLJ38_00800"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HSU38060.1"
                     /translation="MSAGLEVVTTVGAYREACERLRADGGRLAFVPTMGALHRGHLAL
                     VAEGRRRAANVAVSIFVNPTQFGPNEDFQKYPRPIERDLELCREAGVRLVFTPSPEDM
                     YPRGERTRVHVSGLTDALCGPFRPGHFDGVATVVTKLFAATGPAVAVFGRKDYQQLQV
                     VRRLTADLLLPVEVVGLATVREADGLALSSRNVYLSAEERQRALAIPSGLARALALHA
                     RGERRAGALRRAVLELLEPAASRIDYVTVADADDLRPYADDERVGERPLVALAAFVGT
                     TRLIDNVVVSEDNSPTRTPP"
     gene            963..1637
                     /gene="tmk"
                     /locus_tag="VLJ38_00805"
     CDS             963..1637
                     /gene="tmk"
                     /locus_tag="VLJ38_00805"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HSU38061.1"
                     /translation="MTETRSHPGVFIAVEGVDGCGSTTHSRLLAKTLKTRGAETVLTC
                     EPTNGPIGGLIRQILQRRLFVADASGPRGFVWSTMALLFAADRLDHLDSLVLPALRSG
                     SVVVSDRYDLSSLAYQSATAPEAHDVIPWIRELNSRAVRPDVTVVIDVPAEVAEERRR
                     GRGGVEEMFEHRALQERLVAIYAHAETLVPGDRLVHVSGLGKAEEVSARILEAVLEAV
                     PALRRH"
     gene            1798..2115
                     /locus_tag="VLJ38_00810"
     CDS             1798..2115
                     /locus_tag="VLJ38_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38062.1"
                     /translation="MPCFVGCIAVAFPRLALFLVWFFGDDYFSRAFGTWLWPLLGFFF
                     LPLTTLAFAFGVNTLGRGGEMGPLGWLLVLVALAGDLGLLRGGAHGAKAFRSRRGDWR
                     PPA"
     gene            2132..2641
                     /locus_tag="VLJ38_00815"
     CDS             2132..2641
                     /locus_tag="VLJ38_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38063.1"
                     /translation="MVGHRDRNLPVVPAAAHSPGVRATTVCCLLFLSACGASAPEPAR
                     TPAPVAAKPAVPVAARSAPSTTLARKDVVGFVDSGFANFLQRVQVEPSLADGRFRGWT
                     IVDLRPTNFWTAVDLKPGDVVTSVNGMPIERDTEAWDAFESLRTASELRVAYDRNGAS
                     RTLAYRIVD"
     gene            complement(2623..2967)
                     /locus_tag="VLJ38_00820"
     CDS             complement(2623..2967)
                     /locus_tag="VLJ38_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38064.1"
                     /translation="MSFRQDYIERLIQKLAEAIARALGLARAGRGEEGIELLEDAIAS
                     GLGMPLPMLLKLTPETLFSLFGKERSALLAEALRAHEGMLAAAGRADEAARSGKLAAS
                     LETRAAAQSTIR"
     gene            complement(3021..4154)
                     /locus_tag="VLJ38_00825"
     CDS             complement(3021..4154)
                     /locus_tag="VLJ38_00825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38065.1"
                     /translation="MTRVHRVYFVPGLFGFAKLAGYDYFTHVRRGVEQRFAAAGVPVV
                     CEDVPAPPTSSLRYRSRVLAGTVARTAGADGPIHLFGHSTGGLDSRLVLSPSANLGLD
                     EPLFAWRSRVVTAISVNTPHYGTPVASYFATVSGTRVLYALSLFTVLSLTLGEPSLAI
                     FSRVLAGLGGIDAILGGDLKLFSRITDNVLRFVDKDGREEISDFLGKVRVDQGAIVQI
                     MPEAMDLFNAATQNRPGVRYGSIASAAPPPRSLRMARRVRSPYTAFTAAMFSTLYQFA
                     GQRPRVYPYAKPRARELELLRAGIEHEIDDSISDGIVPTLSMLWGELLWAGEADHLDV
                     LGHFHDEREKSEHTDWITSGSRFTSQRFGALLDAIVDYQLRAT"
     gene            complement(4151..5014)
                     /locus_tag="VLJ38_00830"
     CDS             complement(4151..5014)
                     /locus_tag="VLJ38_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38066.1"
                     /translation="MELGLLTRWAALAMSSGALACSVEVDPEHEATNTATTRAVIAVT
                     RSAPAAAPDEARAEAFAGFLRTPAGADAKSALGLAGLRLDLPPNGECRKGAHADAVPA
                     GLTAVELLDAGEVTVAAGGSVTTLAPRAFPTITDSISGVVYTTRDRAAAPLPAATVYT
                     VAATGGSSLEPLSGFGQAPALLSDVTLGGEAFANVETAPSHGALVLAWAPGAHGDRVY
                     VELDASGDATTCSFADEAGRGTLPVSALPTSGPATVSVHRLRESAFSDAGLAQGALRF
                     DFELSASVTFE"
     gene            complement(5129..5434)
                     /locus_tag="VLJ38_00835"
     CDS             complement(5129..5434)
                     /locus_tag="VLJ38_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HSU38067.1"
                     /translation="MATFITDDCINCGACEPECPNDAIYRGDEIYVIEPALCTECVGF
                     NGREACQSVCPVACCLPDPKRVESEPVLLERALRLHPNDKELRERALTGTFPSRFKK"
     gene            5469..>5887
                     /locus_tag="VLJ38_00840"
     CDS             5469..>5887
                     /locus_tag="VLJ38_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38068.1"
                     /translation="MTYPAPVMGRAHLPFSPADHLRVLLLGALVALGCKPQIGDKCTT
                     STDCSQVGDRLCDISQPSGYCTVFNCEPKGSNAAASCPDGASCVAFGADPSPVASCEN
                     ALGSTPYTRTFCMKECKNGNDCRDGYVCEDPEADERFS"
BASE COUNT          890 a         1993 c         2088 g          916 t
ORIGIN      
        1 tccggctgaa caaacgggag cgaagcccgt cgtcccggga gcggcgccgg gctacgggcc
       61 cgcgggtgac gagccgtgag tgccggcctc gaagtggtga cgacggtggg cgcctatcgt
      121 gaggcgtgcg aacggctgcg cgccgacggc gggcggctcg cgttcgtgcc gaccatgggc
      181 gcgctgcacc gcggccatct ggcgctcgtc gccgaagggc gccgccgcgc tgcgaacgta
      241 gccgtcagca tcttcgtcaa tcccacgcaa ttcgggccga acgaggattt ccaaaaatac
      301 ccgcgcccca tcgagcgcga tctcgagctc tgtcgcgaag ccggcgtgcg cctcgtcttc
      361 acgccttccc ccgaggacat gtacccgcgc ggagagcgca cgcgcgtcca cgtgagcgga
      421 ctcacggacg ccctgtgcgg tcccttccgc ccggggcact tcgacggcgt ggcgaccgtc
      481 gtgacgaaat tgttcgctgc gaccgggccg gccgtcgccg tgttcggccg caaggattac
      541 cagcagctcc aggtcgtgcg acgcctgacg gcggatttgc tcttgcccgt cgaagtcgtc
      601 gggctagcga cggttcgcga agcggacggt ctcgcgctct cgtcgcgcaa cgtctacctg
      661 agcgccgagg agcggcagcg agcgctcgcc attccgagcg gcctcgcgcg ggccctcgcg
      721 ctccacgcgc gcggcgagcg gcgcgctggg gcgctccggc gcgccgtgct cgagctcctc
      781 gagccggcgg cgagtcggat tgactacgtg acggtcgctg acgcagacga tttgcgcccg
      841 tacgctgatg acgagcgggt gggggagcga cccctcgtgg cgctcgccgc gttcgtcggc
      901 acgactcgcc tcatcgacaa cgtcgtcgtg agcgaggaca attccccgac tagaaccccc
      961 ccatgaccga aacccgatca caccccggag tgttcatcgc cgtcgaaggc gtcgacggtt
     1021 gcggcagcac gacgcactcg cggctactcg cgaagacact gaagacgcga ggcgccgaga
     1081 ccgtgctcac ctgcgagccg acgaacggcc cgatcggcgg actcatccgc cagatcctgc
     1141 agcgccgtct gttcgtagcc gacgcgagcg gtccgcgcgg tttcgtgtgg tctacgatgg
     1201 cgctgctctt cgctgccgac cggctcgacc acctcgactc gctcgtcctg ccggcgctgc
     1261 gtagcggctc ggtcgtcgtg agcgatcgtt acgatctgtc gagcctcgcg tatcaatccg
     1321 ccacggcccc cgaggcccac gacgtgatcc cctggattcg cgagctgaac tcgcgcgccg
     1381 tgcgcccgga cgtgaccgtc gtcatcgatg ttccggcgga agtcgcggag gagcgacggc
     1441 gcggtcgcgg cggcgtcgaa gaaatgttcg agcaccgcgc gctgcaggaa cggctcgtgg
     1501 cgatctacgc gcacgccgaa acgctcgtgc ccggcgaccg gctcgtccac gtttccggcc
     1561 tcggaaaggc cgaagaagta tcggcgcgca tcctggaagc cgtgctcgag gccgtcccgg
     1621 cgctgcggcg gcattaatcg ggggagaggc agagccagag caagaggagc gatggggtcg
     1681 gagtgagggc gcacggagcg gtgctcgcgc actgcggagg tggggcgcgg cgggcggaga
     1741 cgagggagga gagagcgtag ccgcgcgcaa cgcgacgtgc gaacatcgca gctagtcatg
     1801 ccctgtttcg tcggctgcat cgccgttgcg tttccgcgct tggctctgtt tttggtctgg
     1861 ttcttcggcg acgattactt ctcgcgcgcg ttcggcacct ggctctggcc gctgctcggc
     1921 ttcttcttct tgccgctcac gacgctcgcg ttcgctttcg gagtgaacac gctcggtcgc
     1981 ggaggtgaga tgggtccgct cggctggctg ctcgtcctcg tggcgctggc gggcgatctc
     2041 ggactcttgc gcggcggcgc tcacggcgcg aaagcgtttc gcagccgccg cggcgactgg
     2101 cggccgccgg cttgagtcgt cgcgagcgat cttggtaggc catcgcgatc gaaatttgcc
     2161 cgtggtcccc gccgcggccc atagtccggg cgtgcgcgcg acgaccgtct gctgtctcct
     2221 tttcctgagc gcttgcggcg cctccgcgcc cgagcccgct cgaacgccgg cgcccgtggc
     2281 cgccaaaccg gccgtcccgg tagcggcccg ctcggcaccg agcacgacac tcgcgcgcaa
     2341 agacgtggtc ggtttcgtcg actcgggctt cgcgaatttc ttgcagcgcg ttcaggtcga
     2401 gccgagcctc gccgacgggc gcttccgtgg ctggaccatc gtcgatttgc ggccgacgaa
     2461 cttctggacg gcggtcgatc tcaagccggg cgacgtggtc acgtcggtga acggcatgcc
     2521 catcgagcgc gacacggagg cgtgggacgc gttcgaatcg ctccgcacgg cgagcgagct
     2581 gcgcgtcgcg tacgatcgca acggcgcgtc gcgcacgctc gcctaccgta tcgtcgactg
     2641 agcggccgcc cgcgtctcga gcgacgccgc gagcttgccc gagcgcgctg cctcgtccgc
     2701 gcgtccggcg gcggcgagca tgccctcgtg agcgcgcaga gcttcggcga gcagcgccga
     2761 acgctccttg ccgaacagcg agaacaaggt ctccggcgtg agcttcagca gcatgggcag
     2821 cggcatgccg aggccggacg cgatggcgtc ttcgagcagc tcgatgccct cttctccgcg
     2881 accggctcga gccaagccga gagcgcgcgc gatcgcctcc gcgagctttt ggatcagccg
     2941 ctcgatgtag tcctgccgaa acgacatgcg cgagtatgcg gcatccgacg cggcacggcg
     3001 agtcagcgcc gcgggaccgc tcaggtcgcg cgcagttggt agtcgacgat cgcgtcgagc
     3061 agcgcgccga agcgctggct cgtgaagcgc gagccgctcg tgatccagtc ggtgtgctcg
     3121 ctcttttcgc gttcgtcgtg gaaatggccg agcacgtcga ggtggtcggc ttcgcccgcc
     3181 cacaagagct cgccccacag catactgagc gtcggcacga tgccgtcgct gatgctgtcg
     3241 tcgatctcgt gctcgatccc cgcgcgtaag agctcgagct cgcgcgccct cggtttggcg
     3301 taggggtaga cgcgcgggcg ctgcccggcg aactggtaca gggtcgagaa catcgcggcc
     3361 gtgaaggccg tgtacggcga gcggacgcgc cgtgccatgc gcagcgagcg agggggcggc
     3421 gcggccgaag cgatggagcc gtaacggacg ccggggcggt tttgggtcgc cgcattgaag
     3481 aggtccatcg cctccggcat gatctggacg atcgcgcctt ggtcgacgcg caccttgccg
     3541 agaaaatccg agatctcctc gcggccgtcc ttgtcgacga agcgcaggac gttgtcggta
     3601 atgcggctga agagcttgag atcgccgccc aagatcgcgt cgatcccgcc gagcccggcg
     3661 agtacgcgcg agaagatggc gagcgacggc tcgcccagcg tgagcgacag gaccgtgaag
     3721 aggctcagcg cgtagagcac ccgcgtgccc gagaccgtcg caaagtagct ggcgacgggc
     3781 gtgccgtagt gcggtgtgtt gacgctgatc gccgtgacga cgcgcgagcg ccacgcgaag
     3841 agcggttcgt cgaggccgag gttcgccgag ggcgagagca cgagccgcga gtcgagcccg
     3901 cccgtcgagt gcccgaagag gtggatgggg ccgtcggcgc cggccgtacg cgccaccgtc
     3961 ccggcgagca cgcgcgaacg atacctgagc gacgaggtcg gcggcgcggg gacgtcctcg
     4021 cacacgaccg gcacgcctgc cgcggcgaag cgttgttcga cgccgcgccg gacgtgggtg
     4081 aaatagtcgt agcccgcgag cttcgcgaag ccgaagagtc ccggcacgaa atagacgcgg
     4141 tggactcgag tcactcgaag gtgacggacg ccgagagctc gaagtcgaaa cgcagcgcgc
     4201 cctgcgcgag gcccgcgtca ctgaacgcag attcccgcaa gcgatggacc gaaaccgtgg
     4261 ccggaccgga ggtcggaagc gcgctcacgg gtagcgtgcc gcgccccgcc tcgtcggcga
     4321 agctgcaggt cgtggcgtcg ccgctcgcgt cgagctcgac gtacacgcga tcgccgtgcg
     4381 ctccgggcgc ccaggcgagc acgagcgcgc cgtgactcgg cgccgtttcg acgttcgcga
     4441 acgcctcgcc cccgagggtc acgtcggaga gcaatgccgg cgcttgtccg aagcccgaga
     4501 gtggctcgag cgagctcccg cccgtggcgg cgaccgtgta aacggtagcg gccggcagcg
     4561 gagcggccgc gcgatcgcgc gtcgtgtaaa cgacacccga aatgctgtcg gtgatggtgg
     4621 ggaaggcgcg cggcgcaagc gtcgtgacgc tgccgcccgc agcgaccgtt acttcgcctg
     4681 cgtcgagcag ctccacggcc gtgagcccgg cgggcacggc gtcggcgtgg gcgcctttgc
     4741 ggcattcgcc gttaggggga aggtcgagcc tgagcccggc gagcccgagc gcgctcttgg
     4801 cgtcggcgcc ggccggcgtg cgcaggaagc cggcgaacgc ttcggctcgc gcttcgtccg
     4861 gcgcggcggc gggggcgctg cgcgtgacgg cgatgacggc gcgggtcgtc gccgtgttcg
     4921 tcgcctcgtg ctcgggatcg acctcgaccg aacaggcgag cgccccgctg ctcatggcga
     4981 gcgctgccca gcgggtgaga agcccgagct ccatgttccg cctgggatcg tagacgacct
     5041 cttcgcaccg agcaagacgg cccgcgcgaa cggcctccgc ctcgctagat tcctcgacgg
     5101 ggcttcatgc cgaggtccgc gcccccagct acttcttgaa acgcgaaggg aaagtgccgg
     5161 tgagggctcg ctcgcggagc tccttgtcgt tcgggtgcag ccggagggct cgctcgagca
     5221 gcacgggttc gctttcgacc cgcttcggat ccggcaggca gcacgcgacg gggcagacgg
     5281 actggcacgc ctcacggccg ttgaacccga cacactccgt gcagagcgcc ggctcgatca
     5341 cgtagatctc gtcaccgcgg taaatcgcgt cgttcgggca ttcgggctcg catgcgccgc
     5401 agttgatgca gtcgtccgtg atgaaggtgg ccaaacgaca gcttcgggat agcactcgag
     5461 ggctgctcgt gacataccct gcgcccgtca tgggccgcgc ccacctgccg ttttcgcctg
     5521 ccgaccacct ccgagtgcta ctcctggggg ccctcgtagc cctcggctgc aagccgcaga
     5581 tcggcgacaa atgcaccacc tccaccgact gctcgcaggt cggcgaccgg ctgtgcgaca
     5641 tttcgcagcc gagcggttac tgcaccgtct tcaattgcga gccgaagggt agcaacgcgg
     5701 cagcaagctg cccggacggg gcttcgtgcg tcgcgttcgg cgcggacccg tcgcccgtcg
     5761 caagttgcga aaacgcgctc ggctcgacgc cttacacccg cacgttctgc atgaaggagt
     5821 gcaagaacgg caacgactgc cgtgacggtt acgtgtgtga ggatccggaa gcggacgagc
     5881 gtttctc
//
LOCUS       DATIML010000050         3589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1453969, whole genome shotgun sequence.
ACCESSION   DATIML010000050 DATIML010000000
VERSION     DATIML010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1453969"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..912
                     /locus_tag="VLJ38_00845"
     CDS             <1..912
                     /locus_tag="VLJ38_00845"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSU38069.1"
                     /translation="NSALAVDLTGQVASDTLGGRFFSGIGGQVDFIRGAARSRGGKPI
                     IALPSTAKQGSVSRIQPALEAGAGVVTSRGDVHYVVTEYGVADLWGKTIRDRSMALVE
                     IAHPDYRRELLDSAKARHYVFADQIVPRRAPSLLPTSVTLRSGEPIRIRPLRMADQEI
                     LQDLFYRLSDDSVYQRFLNYKKSHPREEIMALADVDHEQSAALVAEVERGESSEIVAM
                     ARYDIDPATELADVAFVVLDAYQGKGLGTALFRQLIGLARAHGVKGFTADVLSTNGHM
                     LGIFNKSGLRVESKLDSGVYQVRMSLD"
     gene            complement(920..2320)
                     /locus_tag="VLJ38_00850"
     CDS             complement(920..2320)
                     /locus_tag="VLJ38_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU38070.1"
                     /translation="MTKGRILVVDDEAAARSALAELLCAEGYEVETAGDAFKALGRLA
                     DIEPELVLSDLNLPGMDGLELLRRLKEHSAELPVILMTAFGGVETAVTAMRGGAADYL
                     IKPLNADELVLVLARTLESAKLRREASELRRRLDQRYCFDDIVGSSPEMQRVFKIVTQ
                     IAPSRATVLVTGESGTGKELVAAAIHQHSPRAGGPFVKLHCAVLAENLLESELFGHER
                     GAYTGADRKREGRFELAHGGTLFLDEIGEISLGTQVKLLRVLQEREFERVGGNQTLRV
                     DVRVIAATNRDLKAMVVAGKFREDLFYRLNVISLTLPSLRQRPTDVPALAMHFLERYA
                     LENGKAVTRISDEALNQIASYSWPGNVRELENVIERAVVLADGDSVDVAHLPPELVVT
                     RRSGTPAVPGATMDQLERHAILKTMESVGGSTSRAAEILGISVRKIQYKLQEYSVAPK
                     GKAHSLASPNAGKAHH"
     gene            2608..2994
                     /locus_tag="VLJ38_00855"
     CDS             2608..2994
                     /locus_tag="VLJ38_00855"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSU38071.1"
                     /translation="MTSDVVTLGRNEKLVVADDVMRLGRIRHLPIVDDDGRLAGIVSQ
                     RDLFHSGLMKALGYGSHAQQNVLDMLAVKEAMRDDVVTTAPTTPLVEAAKLMMERKIG
                     CLVVVDGDKIAGILTEGDFVKLVAEG"
     gene            complement(2972..3160)
                     /gene="ccoS"
                     /locus_tag="VLJ38_00860"
     CDS             complement(2972..3160)
                     /gene="ccoS"
                     /locus_tag="VLJ38_00860"
                     /inference="COORDINATES: protein motif:HMM:NF015554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HSU38072.1"
                     /translation="MTVLFVVLPLAVLLSGLAALAFVWATRRGQFDDLETPALRLLTD
                     ELEERRATAPEVSPPPRV"
     gene            complement(3157..>3589)
                     /locus_tag="VLJ38_00865"
     CDS             complement(3157..>3589)
                     /locus_tag="VLJ38_00865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38073.1"
                     /translation="VAALGGKSPEQKLAWIERARGSGPVVMIGDGINDAAAMSAADVA
                     VAVHGGAEAALVAADAFTTVAGVGKVLEAVQGARRTLAVIRRGIAFSLAYNLLGVGLC
                     MAGLVSPLVAAVLMPLSSLTVVTSALKARTFQAPTRRKLNS"
BASE COUNT          637 a         1169 c         1172 g          611 t
ORIGIN      
        1 aactcggcgc tcgccgtcga tctgacgggc caagtggcct ccgatacgct cggtggacgt
       61 ttcttctcgg gcatcggcgg gcaagtcgat ttcatccgcg gagccgcgcg cagccgcggg
      121 ggcaagccca tcatcgcgct cccttcgacc gccaagcagg gcagcgtgag ccgcattcag
      181 ccggcgctcg aagcgggagc cggggtcgtc acgagccgcg gcgacgtgca ctacgtggtc
      241 accgaatacg gcgtggccga tctgtggggc aagactattc gcgaccgcag catggcactc
      301 gtcgagatcg cgcacccgga ctaccgccgc gagctcctcg actcggccaa ggcgcggcac
      361 tacgtcttcg ccgatcaaat cgtgccgcga cgcgcgccct cgctcttgcc gacgagcgtc
      421 acgttgcgct cgggcgagcc gattcggatc cgcccgttgc gcatggccga tcaagaaatt
      481 ttacaggatc tcttctatcg cctgtcggac gacagcgttt atcagcgctt cttgaactac
      541 aaaaagtccc acccgcggga ggaaatcatg gccctcgccg acgtcgatca cgagcagagc
      601 gcagcgctcg tggccgaagt cgagcgtggc gaatcgagcg aaatcgtcgc catggctcgt
      661 tacgacatcg atcccgcgac ggagctcgcc gacgtggcct tcgtcgtgct cgacgcttac
      721 caaggcaagg gcctcggcac ggcgctcttc cggcaattga tcgggctcgc gcgcgcccac
      781 ggcgtcaaag gtttcactgc cgacgtgcta agcacgaacg gtcacatgct cggcatcttc
      841 aacaagagcg gcctgcgcgt cgaaagcaag ctcgactcgg gggtctatca ggtgcggatg
      901 tcgctcgact gagcgaggct caatggtggg ctttgcctgc gttgggggac gcgagcgagt
      961 gcgccttgcc tttgggcgcg acgctgtatt cctggagctt gtattggatc tttcgcacgc
     1021 tgatgccgag gatctccgcg gcccggctcg tggaaccgcc gacggactcc atcgtcttga
     1081 ggatggcatg gcgttcgagc tggtccatcg tcgcgcccgg gacggccggc gtgccgctcc
     1141 ggcgtgtcac gacgagctcg ggcggcaggt gcgcgacgtc gacgctgtca ccgtcggcca
     1201 ggaccaccgc gcgctcgatc acgttttcga gctcccgcac gttgccgggc cagctgtaac
     1261 tcgcgatctg gttcagtgct tcatcgctga tacgggtgac cgctttgccg ttctccagcg
     1321 cgtagcgctc gagaaaatgc atggcgagcg cgggcacgtc ggtcgggcgc tggcgtaagg
     1381 acggtaacgt gagacttatc acgttcagcc gatagaacag gtcctcgcgg aatttgcccg
     1441 ccacgaccat tgccttgaga tcgcggttcg tcgccgcgat gacacgaaca tcgacgcgta
     1501 gcgtctgatt gccgcccacg cgctcgaact cgcgctcttg gagtacgcgc aagagcttca
     1561 cctgcgtgcc gagcgaaatt tcgccgatct cgtcgaggaa aagcgtgccc ccgtgcgcga
     1621 gctcgaagcg accttcgcgc ttgcgatcgg cgcccgtgta cgcgccgcgc tcgtgaccga
     1681 agagctcgct ttccagcaga ttttcggcga gcaccgcgca atggagcttc acgaaaggac
     1741 cgccggcacg cggtgaatgc tggtgaatcg cggcggcgac gagctccttg cccgtaccgg
     1801 attcacccgt cacgagcacc gtggctcggc tcggcgcgat ctgcgtgacg atcttgaaca
     1861 cccgctgcat ttccggcgac gagcccacga tgtcgtcgaa gcagtagcgc tggtcgaggc
     1921 gcctgcggag ctcggaggct tcgcgacgaa gcttggcgct ctcgagggtg cgagcgagca
     1981 cgagcacgag ctcgtcggca ttgagcggct tgatcaggta gtcggccgcg cccccgcgca
     2041 tggcggtcac cgccgtctcg acgccaccga aagcggtcat caggatgacg ggcagctcgg
     2101 ccgagtgctc cttcagcctg cgcaagagct cgagcccgtc cattcccggc aggttcaaat
     2161 ccgagagcac gagctcgggt tcgatatcgg caagacgacc gagcgccttg aacgcatcgc
     2221 ctgcggtttc gacctcgtac ccttcagcgc acagcagctc cgcgagcgcc gaacgcgctg
     2281 ccgcctcgtc gtcgacgacc aggattctgc ccttagtcat gcgtcgtctc cctactgctc
     2341 aaaaatgcca caggacggag agagctaaaa gcgtgccgcg gagcccaggc gccgcatgcc
     2401 tttgaaaagt atgcgtattt cgactctacc cgcggcacgt tcagttcgca ggacgcatca
     2461 gttgcgccca attccttcgc gggccgtgag ggggcgcata gactgcgccg acttgcctgc
     2521 gaagctccta ggaagcccgc ggacgcaagg gcatccttcc acgcaccggt gaccatgaaa
     2581 cctcgtccga ccctagtccg tgacgtcatg acttccgatg tggtgacgct cggccgaaat
     2641 gagaagctgg tcgtagccga tgatgtcatg cggctcggaa ggatccgtca cctgcccatc
     2701 gtcgatgacg acggcaggct ggcgggcatc gtcagtcagc gcgatttgtt tcacagcgga
     2761 ctcatgaagg ctctcggcta cggcagccac gcgcagcaaa acgtcctcga catgctcgct
     2821 gtcaaagagg ccatgcggga cgacgtagtc acgacggcac cgacgactcc cctcgtcgag
     2881 gcggccaagc tcatgatgga gcgcaaaatc ggctgcttgg tggtggtgga cggcgataag
     2941 atcgccggca tcctcaccga gggtgacttc gtcaaactcg tggcggaggg ctgacttcgg
     3001 gagcggtcgc gcgccgttcc tcgagctcgt ccgtgagcag ccgaagcgcc ggcgtttcga
     3061 gatcgtcgaa ctggccgcgt cgcgtggccc agacgaacgc cagggcggcg aggcccgaca
     3121 acaggaccgc gagaggcaac acgacgaaga gcacggtcat gagttgagct tcctgcgcgt
     3181 aggcgcctga aaggtacgcg ccttgagggc agaggtgacg acggtgagcg aggacaacgg
     3241 catcaacacg gccgcgacga gcggggaaac gagacccgcc atgcagagac cgacgccgag
     3301 caggttgtag gcgagcgaaa acgcgatgcc gcgccggatc acggcgagcg tgcggcgcgc
     3361 accctgcact gcctcgagta ccttgccgac gcccgcgacc gtcgtgaagg cgtcggcggc
     3421 gacgagcgcg gcttcggcgc cgccgtggac ggcgaccgcg acgtccgccg ccgacatcgc
     3481 tgcggcgtcg ttgatgccgt cgccgatcat cacgaccggt ccgctgccgc gcgcgcgctc
     3541 gatccaagcg agcttttgtt cggggctctt gccgcccagg gcggcgacg
//
LOCUS       DATIML010000051         4002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1165591, whole genome shotgun sequence.
ACCESSION   DATIML010000051 DATIML010000000
VERSION     DATIML010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4002
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165591"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1246)
                     /locus_tag="VLJ38_00870"
     CDS             complement(<1..1246)
                     /locus_tag="VLJ38_00870"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSU38074.1"
                     /translation="MTSRQVRDAFTTLAAALACVLLVLGLHDTPQRTLEIVATSLPAT
                     TAPRDAALLVKVTRAGAAVANASVRIYVEHDGNEYPAGAGATNGAGEATLDELPREAV
                     WVLVEAAGLTRVARAVALVHGRTSLDVALEPEHTLGVHVTDERGAAISGATVLVTASD
                     ALPFGALTDAKGDATVTHLPAEPWDLKASARGYESSERSAVTGRTTLALRRLGSISVL
                     VTHPDGSHAAQATVAIAGSSLWPARRTVTDGDGRCRIAGLLGGAYDLVATLEREVSEP
                     LVGYALERGSEADVTLVLAPGRFVTALVTDGDGANPTLVADADVVLAPGGVGSFPLLG
                     RTAPNGRVTLGPISRGPATLGARADGFVSSALVAVPKDVTEPVTVALLRGATLRGDVV
                     DDRGFPIAGATIDVVGTDAFGLP"
     gene            1318..2526
                     /locus_tag="VLJ38_00875"
     CDS             1318..2526
                     /locus_tag="VLJ38_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HSU38075.1"
                     /translation="MAGRESAFLVETLIFRLVMRRAGVLSLLAACGLGCSGADRPDPA
                     SLVHPDRTTTSDIIDGIPLPPVTCDDFCGETFLHQLQTPPNLYFLVDRSGSMSDLLQG
                     SPLNKYDAARRVLGKLLNVIGYRVRYGASIFPEFADTCGAGHEVFAPTVGGLPSCDGS
                     RDPVLTAFLKSFGEYAPGGATPTAAAIAGVRSELEQLEGSTYLVLLTDGAPNCNFDAS
                     CGADQCTLNIEGASIGRQQCTSRFNCCDPGNSGPLAPAECVDADATEQEIARLAAHGI
                     PTYVVGMPGAGAYAEVLDRLAVAGGTARDGDTAYYAADDEAALERALYAIGTGVAIRC
                     TIELETPPDDPDRVNVYFDGQVVPADSYNGWAWDGDARIVVNGDACASLESGDVVDAR
                     VVFGCDTVVR"
     gene            2555..2833
                     /locus_tag="VLJ38_00880"
     CDS             2555..2833
                     /locus_tag="VLJ38_00880"
                     /inference="COORDINATES: protein motif:HMM:NF013939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HSU38076.1"
                     /translation="MGDTELDKLRRAIDAVDTSLLELIHERVRLVLEVGAYKAKRGLA
                     VYDPERERRLLERLTSLAQPPVEPDTVRRIFERLIDESRRLEQRHTPR"
     gene            complement(2862..>4002)
                     /locus_tag="VLJ38_00885"
     CDS             complement(2862..>4002)
                     /locus_tag="VLJ38_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HSU38077.1"
                     /translation="GGLRDMSIIATPPVDRRTIRTITSQFDPTLVREAVEQELARGGQ
                     VFYVYNRVEGIYERAERLAALVPGARIAVAHGKLSEDVLERTMFGFVGGDYDVLVATA
                     IIESGLDIPRANTIIIDRADMLGLSQLYQLRGRVGRARERAYCYLLVPPPSQLSDEAR
                     QRLEALERFSELGSGFQLATLDMELRGTGDLLGGEQSGFAATVGFELFCRMLEEATRE
                     LRGESVVHEVEPELSFDVEALLAAEYVAEVGVRLSLYKRFASAADEAEVDDLAQELEN
                     RFGPPPLEAKRFVELMRLKCELRRLRVLGCEATAKSVSFLLRDDTPLDPAKVRELVGR
                     KRSPYRLSPDGRLTRRLLENEAAADGLVLAAKALEELATCVGGAN"
BASE COUNT          600 a         1369 c         1419 g          614 t
ORIGIN      
        1 cgggcaagcc gaacgcgtcc gtgcccacga cgtcgatcgt cgcgcccgcg atgggaaagc
       61 cgcgatcatc gaccacgtcg ccgcgcagcg tggcgccgcg caagagtgcg acggtgacgg
      121 gctccgtcac gtctttgggc acggcgacga gagcgctcga gacgaagccg tccgcgcgcg
      181 cgccgagcgt cgccggaccg cggctgatgg gtccgagcgt gacgcgcccg ttcggagcgg
      241 tgcgaccgag cagcgggaac gagccgacgc cgcccggcgc gagcacgacg tcggcgtcgg
      301 cgacgagcgt gggattcgcc ccgtcgccgt ccgtgacgag cgcggtgacg aaacggcccg
      361 gcgcgagcac gagcgtgacg tcggcctcgc tgccgcgttc gagcgcgtag ccgacgagcg
      421 gttccgaaac ttcgcgctcg agcgtcgcca cgagatcgta cgcgccgccg agcaggcccg
      481 cgatgcgaca gcgaccgtcg ccgtccgtga cggtgcggcg cgcgggccag agactcgagc
      541 ccgcgatcgc gaccgtcgcc tgcgcggcgt gcgagccgtc agggtgtgtg accagaacgc
      601 tgatcgagcc caaacgccgg agcgcgagcg tcgtgcggcc cgtgacggcc gagcgctcgc
      661 tcgactcgta accacgcgct gacgctttga ggtcccaggg ttcggccggc aagtgcgtca
      721 ccgtggcgtc gcctttggcg tccgtgagcg cgccgaaggg tagcgcatcg ctcgccgtga
      781 cgagcacggt cgcgccgctg atggccgcgc cgcgttcgtc ggtcacgtgc acgccgagcg
      841 tgtgctccgg ttcgagagcc acgtcgagcg acgtccgccc atgcacgagc gctacggcgc
      901 gtgccacgcg cgtgaggccg gcggcttcga cgagcaccca gacggcttcg cgcggtagct
      961 cgtcgagcgt cgcctcgccc gcgccgttcg tcgcgccggc gccggcgggg tactcgttac
     1021 cgtcgtgctc gacgtaaatc cgcaccgacg cgttcgcgac cgcggcgccg gcgcgcgtga
     1081 ctttgacgag cagcgcggcg tcgcgcggcg ccgtcgtcgc gggcaggctc gtcgcgacga
     1141 tttcgagcgt ccgctgcggc gtgtcgtgca gcccgaggac gaggagcacg caggcgagcg
     1201 cggcggcgag cgtcgtgaac gcgtctcgga cctggcggga cgtcatcggt gtacggcggt
     1261 gtaacccctt cttttcgtac tgcgatgacg acggccgagc aacgcgaact gccgcgaatg
     1321 gccggccgcg agagcgcgtt cctcgtggag acgctaatct ttcggctcgt gatgcgccgt
     1381 gccggggtct tgagcttgct cgccgcgtgc ggcctgggct gctcgggcgc cgatcgtccc
     1441 gatccggcga gtctcgtgca cccggatcgc acgacgacct ctgacatcat cgacggcatc
     1501 ccccttcctc cggtgacctg cgacgacttt tgcggcgaga cgttcctgca ccagctgcag
     1561 acgccgccca atctctattt cttggtcgat cgttccggca gcatgagcga tttgctccag
     1621 ggcagccctt tgaacaagta cgacgccgcc cgccgcgtgc tcggaaagtt gctcaatgtg
     1681 atcggctatc gcgtgcgcta tggcgcgagt attttcccgg agttcgccga cacgtgcggc
     1741 gccgggcacg aagttttcgc tccgaccgtc ggcggcttac cgagctgcga tggctcgcgg
     1801 gacccggtcc tcacggcctt tctgaaaagc ttcggcgagt atgcgcccgg tggcgcgacg
     1861 ccgaccgcgg cggcgatcgc gggcgtgcgc tccgagctcg agcagctcga gggcagcacg
     1921 tacttggtgc tgctcacgga cggcgcgccg aactgcaatt tcgacgccag ctgcggcgcc
     1981 gatcagtgca cgctgaacat cgaaggcgcg agcatcggcc gccagcaatg cacgtccagg
     2041 ttcaactgct gcgatcctgg gaacagcggg ccgctcgcgc ccgccgagtg tgtggacgcg
     2101 gacgcaacgg agcaggaaat tgctcgtctg gcggctcacg gcatcccgac gtacgtcgtc
     2161 ggcatgcccg gcgcgggcgc ctacgccgaa gtcctcgacc ggctcgccgt cgcggggggg
     2221 acggcgcgcg acggtgacac ggcgtactac gccgccgacg acgaagcggc cctggaacgg
     2281 gcgctctatg ccatcggcac cggcgtcgcc attcgctgca ccattgagct cgagaccccg
     2341 ccggacgatc cagaccgcgt caacgtctac ttcgacggcc aagtggtgcc ggccgactcg
     2401 tacaacggct gggcgtggga cggcgacgct cgcatcgtgg tgaacggcga cgcatgcgcg
     2461 agcctggagt ccggcgacgt ggtggacgcc cgggtcgttt tcggatgcga caccgtcgtg
     2521 cgctgacggc aaaaagtggc ctagactctg cggtgtgggc gacaccgagc tcgataaact
     2581 gcgccgtgcc atcgacgccg tcgataccag cctgctcgag ctcattcacg agcgagtgcg
     2641 gctcgtgctc gaggtcggcg cgtacaaggc gaagcggggg ctcgcggtgt acgatccgga
     2701 gcgcgagcgg cgtttactcg agcggctcac gtcgctcgcg cagccgcccg tagaaccgga
     2761 cacggtgcgc cggatcttcg agcggttgat cgacgagtca cggcggctcg agcaacgcca
     2821 cacgccgcgt taggctcgac tccgtctcgc tcgaggtgag gctagttggc gccgccgacg
     2881 cacgtcgcga gctcctcgag cgctttggcc gcgagcacga gcccgtccgc cgcggcttca
     2941 ttttcgagca gccggcgcgt gagcctgccg tctgggctca gccgataggg cgagcgcttg
     3001 cggccgacga gctcgcgtac tttggcgggg tcgagcggcg tatcgtcgcg caagaggaag
     3061 ctcacgctct tggccgttgc ctcgcagccg agcacgcgca ggcgacggag ctcgcacttg
     3121 agccgcatga gctcgacgaa gcgcttggcc tcgagcggcg gcgggccgaa gcgattttcg
     3181 agctcttgtg cgaggtcgtc cacctcggcc tcgtctgcgg cgctcgcgaa acgcttgtag
     3241 agcgagagcc gcacaccgac ctcggcgacg tactcggcgg cgagcaacgc ctcgacgtcg
     3301 aaggagagct ctggctcgac ctcgtgcacc acgctttcgc cgcggagctc gcgcgtcgct
     3361 tcctcgagca tgcggcaaaa gagctcgaag ccgaccgtag ccgcgaagcc gctctgctcg
     3421 ccgccgagca ggtcgcccgt gccgcgcagc tccatatcga gcgtcgccag ctgaaaaccc
     3481 gagccgagct cgctgaagcg ttctagtgct tcgagtcgct ggcgcgcttc gtcggagagt
     3541 tgactcggcg ggggtaccag caagtagcaa taggcgcgct cgcgcgcgcg tcccacgcga
     3601 ccccgcagct ggtaaagctg cgagagcccg agcatgtccg cgcggtcgat gatgatggtg
     3661 ttggcgcgcg ggatgtcgag cccgctctcg atgatcgccg tcgcgacgag gacgtcgtag
     3721 tcgccgccga cgaagccgaa catcgtgcgc tcgagcacgt cctcgctgag cttgccgtgg
     3781 gcgacggcga tgcgcgcgcc cggcacgagc gccgcgagcc gctcggcgcg ctcgtaaatg
     3841 ccctcgacgc ggttatacac gtaaaagacc tggccgccgc gcgcgagctc ctgctcgacg
     3901 gcctcgcgca cgagcgtggg atcgaactgg ctcgtgatcg tgcggatcgt gcggcgatcg
     3961 acgggcggcg tcgcgatgat cgacatgtcg cgcagaccgc cc
//
LOCUS       DATIML010000052         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_299562, whole genome shotgun sequence.
ACCESSION   DATIML010000052 DATIML010000000
VERSION     DATIML010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299562"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1222
                     /locus_tag="VLJ38_00890"
     CDS             <1..1222
                     /locus_tag="VLJ38_00890"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38078.1"
                     /translation="HQHHAASSDVRARFVREGQAASRIRHPHVVDVYDVAVERDMPYL
                     VMEFLEGEDVAKLVAREGALSVQRAVDLLLPAVSAVAMANELGVVHRDLKPENVFLCV
                     ERGVIRPRVVDFGISKLLDKETTSALTATDAFLGTPFYMSPEQAQGAKNVDAKSDQYS
                     LGVILYECVTGRRPFDDPTLYKLMHKIVTGDFPKPRSIDPELPPAFEAVILKAMAIDP
                     AARFESTRALGAALLPFAGDRTRAALWEDFAGSAQTLVDDVRAEPKSGVEPAVADTFG
                     QSAHQLDTRRRPPTRRTLALVVGGLAVGAAAWFLTSSPAPPRSSGAPAIPPPPSVAAA
                     PLTPAVVIPIPAPVNPSAAVSSSAAPVDTHVQSVSPGAGDLAPKASKGGGAKSATERG
                     GKALTPGIPKLAPR"
     gene            1274..>2235
                     /locus_tag="VLJ38_00895"
     CDS             1274..>2235
                     /locus_tag="VLJ38_00895"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HSU38079.1"
                     /translation="MISLPLRADPAAEARFHDELARRHYDARRFDAALREFFLEQRAA
                     PNPRIAFNIALCFQQLKRSEEAYHFFTEYAASNDRDSERRAYAEKVLAELDASVARVL
                     VTSDPPGADIFVDQREHGSYGTTPRLLALPAGQHRIAVDAQGYETGETTVTAAKGQLV
                     EAPITLARVVGELDVSSSVPATAAVLSSEGRTIAQGPTPLVAAIPPGSYQVVVVAPGH
                     LPWSGLASVQAKQATAVAAAPALIPAPTSDLTVTANVAGGLVELDGEPAGFAPTVLTA
                     VPVGEHRVRVRSPLRLAWTGTVPVTADERTWVTVSLEEPPTVHRS"
BASE COUNT          333 a          788 c          759 g          355 t
ORIGIN      
        1 gcaccaacac cacgccgcgt cgagtgatgt gcgcgctcgc ttcgtccgcg aaggtcaggc
       61 cgcgtcgcgg atccgtcatc cgcatgtcgt cgacgtttac gacgtggctg tcgagcgcga
      121 catgccgtac ctggtgatgg agtttctgga gggcgaagac gtcgcgaagc tcgtggcgcg
      181 cgagggagcg ttgtccgtgc aacgtgccgt cgatttgctg ttgcctgccg tgagcgcggt
      241 ggcgatggcg aacgagctcg gtgtcgtcca ccgcgatctc aagccggaga acgtgtttct
      301 gtgcgtcgaa cgcggggtga tccgcccgcg cgtcgtggat ttcggcatct ccaagctctt
      361 ggacaaggag accacgagtg cgctcacggc cacggacgcg tttctcggca cgccgttcta
      421 catgtcgccg gagcaggcac agggagccaa aaacgtcgac gcgaagagtg accaatattc
      481 gctgggcgtg attctgtacg aatgcgtgac cgggcgcagg cccttcgacg accccacgct
      541 ttacaagctg atgcacaaga tcgtcaccgg ggatttcccg aaacctcgga gcatcgaccc
      601 ggagcttccg ccggcattcg aggccgtcat cctgaaggcc atggcgatcg acccggccgc
      661 gcgtttcgag tccacgcgag ccctcggcgc ggctctgctc ccatttgccg gcgatcgcac
      721 gcgcgccgcg ctgtgggagg acttcgcggg cagcgcgcag acgctcgtgg acgacgtgcg
      781 cgcggagccg aaatccggcg tcgagcccgc cgtggcggac accttcgggc agtcggcgca
      841 ccagctcgac acgcgacggc gaccgccgac ccgacgcacc ttggcgctcg tcgtcggcgg
      901 cttggccgtc ggggccgctg cctggttctt gactagctca ccggcgccgc cgcgcagcag
      961 cggggcgccc gcaatcccgc cgcctcccag cgtggcggcg gcgcccctca cacccgcagt
     1021 cgtgatcccg attccagcac cggtcaaccc gagcgcagca gtgtcctcgt cggcggctcc
     1081 cgtggacacg cacgtgcaaa gcgtgtcgcc cggcgcaggc gacctcgcgc ccaaagcgag
     1141 caagggcgga ggcgcgaagt ccgcgacgga gcgcggcggc aaggccctga ctccgggcat
     1201 tccgaagctc gctccgcgct gaacgactat gcgcggcttc cgaggcttcc ccgcgtctct
     1261 tgcgctcgtg acgttgatct cgctgccact gcgggcggat ccggcggcgg aggcgcgttt
     1321 tcacgacgag ctcgcgcgcc ggcactacga cgctcgtcgc ttcgacgccg cgctccgcga
     1381 attctttctg gaacagcgtg cggcgccgaa tccgcgcatc gcattcaata tcgcgctctg
     1441 cttccaacag ctcaaacgct cggaggaggc ctaccatttc ttcactgagt acgcggcgtc
     1501 gaacgaccgc gactccgagc ggcgcgctta cgccgagaag gtgctcgccg agctcgatgc
     1561 ttcggtcgcc cgcgtgctcg tgacgagcga tccgcctggc gccgacatct tcgtcgatca
     1621 gcgcgagcac gggagctacg ggaccacgcc gcgcctgctc gcgctgcccg ccggccagca
     1681 ccgcattgcg gtcgacgccc aggggtacga gaccggggaa acgacggtca ccgcggccaa
     1741 gggccagctc gtggaggcgc cgatcacttt ggcgcgcgtg gtcggggagc tcgacgtgag
     1801 ctcgtccgtg ccggcgaccg ccgcggtgtt gtcctcggag gggcgtacca tcgcgcaagg
     1861 gccgacaccg ctcgttgcgg cgattccgcc cggcagctac caagtcgtcg tcgtggcgcc
     1921 cggccatctg ccgtggagcg ggctcgcgag cgtgcaggcg aagcaagcga ccgcggtagc
     1981 tgccgccccg gcgctcattc ccgcgccgac gagcgacctc accgtcaccg cgaacgtcgc
     2041 tggcggtctc gtcgagctcg acggtgagcc tgcgggcttt gcgcccaccg tgctcaccgc
     2101 tgtccccgtc ggagagcacc gcgtgcgggt caggagtccg ctccgcctcg cctggaccgg
     2161 gacggtaccg gtgaccgccg atgagcgcac ctgggtgacc gtttcgctcg aggagccgcc
     2221 gaccgtgcat cggtc
//
LOCUS       DATIML010000053         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_588584, whole genome shotgun sequence.
ACCESSION   DATIML010000053 DATIML010000000
VERSION     DATIML010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588584"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VLJ38_00900"
     CDS             complement(<1..521)
                     /locus_tag="VLJ38_00900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38080.1"
                     /translation="MHRSKKARLRPTALVSLSGLLLWAACSSSEDDFFNTPPIGGAAH
                     SGASGSAGTTSSAGTTSGAGTTSSAGTTSSAGTTSGSGGNSQGGDAGTSGTPTGGSSA
                     HGGTDSTGGTHSTGGTDSSGGSDNGGAGEANGGAGQANGGGGMTEGGAPSAGAGGTAV
                     VSGGTSGIGGTSG"
     gene            1053..>1591
                     /locus_tag="VLJ38_00905"
     CDS             1053..>1591
                     /locus_tag="VLJ38_00905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38081.1"
                     /translation="MPSNTESKTNGSDQNSAEPSQNGMFGPFRIGLLVGSGMPSTLSF
                     AGEIRLTRYFGAGVRVGLIPTVHFAYYGEATVSYQDYGAYAHLHPFGGGFLLGAELGY
                     ASVKAHYAGTYDTSRYAALGAPSSITTINDGRVQTLVVTPELGYIYTWRAGFTFGFDV
                     GAQIPAASSHVKFSQQVVAA"
BASE COUNT          221 a          603 c          503 g          264 t
ORIGIN      
        1 atgccgctcg ttccgccaat gccgctcgtt ccgccagaca cgacggcagt gccgccggcg
       61 cctgcgctcg gtgcgccgcc ctccgtcatc ccgccgccac cgttggcctg acccgcgccg
      121 ccattggctt cacccgcgcc gccgttatcc gagccaccgc tcgagtccgt gccgcccgtc
      181 gagtgggtgc cgcccgtcga gtcggtaccg ccgtgcgcgg agctgccgcc ggtgggcgtg
      241 ccgctcgtgc cggcgtcgcc gccttgcgag ttgccgccgg agccgctcgt cgtgcccgcg
      301 ctgctcgtcg tgcccgcgct gctcgtcgtg cccgcgccgc tcgtcgtgcc cgcgctgctc
      361 gtcgtgcccg cgctgccgct cgctccgctg tgagccgcgc cgccgatggg cggcgtgttg
      421 aaaaaatcgt cttcgctgct cgagcaagct gcccagagca acagtccgga gagggagacg
      481 agcgcagtcg ggcggagccg cgcttttttc gagcggtgca tcaggcaccg aacgttagca
      541 taaccctcct cggtcgcttg gaaccacgtg ggcgaatgct cctcaccatc gcgcaccacc
      601 tcgcacactt cgctaaacga aagcgcgggc gagcggctcg cgcccgagcg aacgagtgcg
      661 gcttgcgccg tcgatcaccc ccgacctaca ctttggagaa cgtcttgaac actcgagtgc
      721 gtcgggtcgt gtttgcggtc gggctcctcg tcacgcgtgc ctcgggcgcg caggactcgc
      781 cgacggacgc gccgcttcca ccgccacccg ttgctacggg ggagagccca cctgcagccc
      841 ctgccgcccc gagcgcggag ccgctgcccg aacccgcggc tccgccaacc ggcgacgcac
      901 ctacggccga gccgccggcg gccgcggagc ctccgccagt actcgcaccg ctcccgcgcg
      961 agtcatcctc agcaccccct gtgccgccgc cgcctcctgg atctggcgcg cccactacca
     1021 agcaagcgtc ggcgcaaccg ccgggtccaa aagtgccgtc caatacggaa tccaagacga
     1081 acggctcgga ccagaattcg gcagagccgt cacagaacgg tatgttcggt ccctttcgta
     1141 tcggcttgct cgtcggtagc ggtatgccga gcaccctttc gttcgccggt gagatccgac
     1201 tcacccgcta cttcggtgcg ggcgtacgag tgggtctgat cccgacggtg cacttcgcgt
     1261 actacggcga ggcgacggtc tcgtaccagg attacggagc gtacgcgcac ctccacccgt
     1321 tcggtggcgg cttcttgctc ggcgccgagc tcgggtacgc gagcgtcaag gcgcactacg
     1381 cgggcacgta cgacacctcg cgctacgcgg cgctcggagc gccttcgtcg attaccacga
     1441 tcaacgacgg ccgcgtgcag acgctcgtgg ttactcccga gctcggctac atctacacgt
     1501 ggcgtgcggg cttcacgttc gggttcgacg tcggcgcgca gatcccggcg gcctcgagcc
     1561 acgtcaaatt ctcacagcag gtcgttgccg c
//
LOCUS       DATIML010000054         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1166161, whole genome shotgun sequence.
ACCESSION   DATIML010000054 DATIML010000000
VERSION     DATIML010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1166161"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1026)
                     /locus_tag="VLJ38_00910"
     CDS             complement(<1..1026)
                     /locus_tag="VLJ38_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38082.1"
                     /translation="MLDACSVLRLLTCTLLLACGGGGGGSELDAYPNRRAHFASAGRT
                     LGYVANRESDSVSVLDLDSVQELGQVPVGRDPVDTDGPRHVVVDAEAQELYLVLSYPD
                     SIQSPHAAANSSGPRSGYLVALALDDLRPLGELRLAASPNDVALSNDRSELAIAHYDT
                     VLALENTPDIAARRATLAFVRPASALARGSADSTSLVTCVAPATVVYGPNDTRAFVAC
                     TGEDSLAVVDTLNQAVIARVPAGNGLANKPYALTRNRAGTRLALSNQVAQTVVVFQAT
                     DTPLQQASIPVPGVPFFAAFLDDERLLVPLQGPSGAALLDITTGSVLASAVYADSDCN
                     NPSDARVL"
     gene            complement(1039..1659)
                     /locus_tag="VLJ38_00915"
     CDS             complement(1039..1659)
                     /locus_tag="VLJ38_00915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38083.1"
                     /translation="MQFREPPSKGRRLLLVAAPAVLLGACSSDTPEPAGSGAPLVDRA
                     DIADVIYRTGATDEGLLTLLNARPVSEPSAEPVVTAPAEAANLTPLTSFEYRAGTTAL
                     RRVRRARAWSLDDFFALERTAFAHGAPMNGDAFLLAFSTSRAPKLLRVFTQDKSYAPT
                     DDEWQRLAAAGEIITLTLTRGVFEQGRLIADGGPFVGKPLHFSASA"
BASE COUNT          349 a          752 c          817 g          361 t
ORIGIN      
        1 gagcacgcgc gcgtcgctcg ggttgttgca gtcgctgtcg gcgtacacgg cgctcgcgag
       61 cacgctgccc gtcgtgatgt cgagcagcgc ggcgccgctc gggccttgga gcggaacgag
      121 cagccgctcg tcgtcgagaa acgcagcgaa gaagggcacg ccggggacgg gaatcgacgc
      181 ctgttgcagc ggggtgtccg tcgcctggaa cacgacgacc gtctgcgcga cttggttcga
      241 aagcgcgagg cgcgtccccg cccgattgcg cgtcagcgcg tacggcttat tggcgaggcc
      301 gtttcccgcc ggaacacgcg cgatcaccgc ctgattcagc gtatcgacga cggcgagcga
      361 gtcttccccc gtgcaggcga cgaaggctcg cgtgtcgttc ggcccgtaga cgaccgtcgc
      421 tggagcgacg cacgtgacga ggctcgtgct gtcggcggag ccgcgcgcga gagcgctcgc
      481 cggacgcacg aacgcgagcg tcgcgcgccg cgcagcgatg tccggcgtgt tctcgagcgc
      541 gagcacggtg tcgtagtgag cgatggcgag ctcgctacga tcattcgaga gcgccacgtc
      601 gttgggactc gccgcgagtc gcagctcgcc gagcggtcgc agatcgtcga gcgcgagcgc
      661 gacgaggtaa cccgagcgtg gcccgctgct gtttgccgcg gcgtgtgggc tctggatcga
      721 gtcagggtac gagagcacga ggtagagctc ttgcgcttcg gcatcgacca cgacatggcg
      781 cggaccgtcg gtatcgacgg ggtcgcgtcc gacggggact tgcccgagct cctggacaga
      841 gtcgaggtcg agcacgctga cgctgtccga ctcgcgattg gcgacgtagc cgagcgtgcg
      901 tcccgcgctc gcgaagtgcg cgcgccgatt cggatacgcg tcgagctcac tgccgccccc
      961 gcctccgccg caagcgagca acagcgtgca cgtgagcagc cgaaggaccg agcaagcgtc
     1021 gagcatggtg ccggctgcct aagcgctcgc gctgaaatgc agcggtttgc cgacgaacgg
     1081 gccgccgtcg gcaatgagcc gcccctgctc gaaaacgcct cgcgtgaggg tgagcgtgat
     1141 gatttcgccc gccgcggcga ggcgctgcca ttcgtcgtcc gtcggcgcgt aactcttgtc
     1201 ttgcgtgaac acgcgcagga gcttcggcgc tcggctcgtg gagaacgcca ggaggaacgc
     1261 gtcgccgttc atgggcgcgc cgtgcgcgaa cgcggtccgc tcgagcgcga agaagtcgtc
     1321 gagcgaccac gcacgcgcac gccgcacgcg gcggagcgcc gtcgtgccgg cgcggtattc
     1381 gaagctcgtg agcggcgtca ggttcgctgc ttcggccggc gccgtgacga ccggctccgc
     1441 gctaggctcg ctcaccggac gcgcgttgag caacgtgagg aggccctcgt ccgtcgcgcc
     1501 cgtccgatag atcacgtcgg cgatgtcggc gcggtccacc agcggcgcgc cggaccctgc
     1561 gggctcgggc gtgtcgctcg agcacgcgcc caaaagcacc gccggtgcag cgacgagcag
     1621 taagcggcgg cccttgctgg gtggttctcg gaattgcatt cgcgcctagt gtacctcccg
     1681 tccgcgggtt gccacgcgcc gtggctgaaa tggtcgtgac gtgatcacgc tcgctcgatg
     1741 cgcactaccc gcgtgtctgg tctagcgtcg aaacgtcctc gtccgtgcgg tgcgggatcg
     1801 gctggggtgc aagttgccgc tgcacccgtg cccccggagc aacgcgcgcc cggcccggat
     1861 tgcagcagcg ctgatgtcag tccgacggcc tccgttgggc aatgtcatga gtcatttagg
     1921 ctatttgggg ctgagggacg cctggcgcat cgccgcgggc cccgctgacg accgagcgtc
     1981 gtacgggagc ttcgccgccc aacgcccgcg agtgtcttgc gctagcgctg cggtccacta
     2041 taatagacca agttcattca gttcacccgc ggggcacgcg cccgagagca tcacgcggcc
     2101 accgccagac aggtaaccat gcacatcgga ctcatcggcg gcatcgaacg cggcgcacgt
     2161 cactacgagg tgttggccgc ggagcgcggg cacaccgtcg aaatccattc cgggcacttg
     2221 gcgggtcggg gcgtggatac gcttgcagcg atcgtcgagc gggcggacgt tatcgtggt
//
LOCUS       DATIML010000055         2598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_11056, whole genome shotgun sequence.
ACCESSION   DATIML010000055 DATIML010000000
VERSION     DATIML010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11056"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..976)
                     /locus_tag="VLJ38_00920"
     CDS             complement(<1..976)
                     /locus_tag="VLJ38_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSU38084.1"
                     /translation="MTLSADFLVLGSGIAGLSFALRAARYGQVLVVTKRAADEAATAY
                     AQGGVAAVFSAEDSFEKHAADTIGAGAGLCHDIVVELCVRDAPAAVRWLAEIGASFSR
                     AGDGELDLGREAAHSERRIVHAGDLTGREIERALVAAVKASPNIRLLEWHVGIDLITL
                     SKFGGPDQCVGAYVLDERRGVVETVVARATVLATGGAGKVYLYTSNPDVATGDGIAMA
                     YRAGAEVANMEFFQFHPTVLYEPKAKSFLISEALRGEGATLRLPTGEPFMKKHHPLGD
                     LAPRDVMARAIDFEMKRTGSESVLLDITHQPRDFLQRRFPGIYAECSRF"
     gene            1101..1928
                     /locus_tag="VLJ38_00925"
     CDS             1101..1928
                     /locus_tag="VLJ38_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HSU38085.1"
                     /translation="MKVLVSLKRVADPDNANKVKIAASNVAVDSTGLEWKTNPFDEYA
                     LEAALRLTENGKAPKQRLGEVVVVTLGPKECEQTLRSALATGADRAIRVEATDDALDG
                     RLVALALKSLVLTEKPDLVLLGKQAVDGDSNQVGQRLAELLDWPMATFAATIREEAGA
                     LLVSREVDGGVGTLRVRLPAVVTVDLRIVSPTSVYSAHTDAAHRYAEGVRFAPLPAIM
                     AAKKKPLDVKTLTELVPGAALSTKTLKFEKPPARSAGVRVKDVTELVDKLMNVSKVL"
     gene            1931..>2598
                     /locus_tag="VLJ38_00930"
     CDS             1931..>2598
                     /locus_tag="VLJ38_00930"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HSU38086.1"
                     /translation="MPHALVVAEITEDGKVKKATLAAITFAQKALPAVGGAFSILVLG
                     GAARAAAAELTGFGAQKVLVCEDPTLAKYTAEHYAPTVAEVGKSFALLVATATSQGKD
                     LMPRVAARLDAGFAGDCSDVFVEGTALRYKRPMYAGNVFGTVELTTQVHVATARQSEF
                     DAAAPSGGSSPIEPIAKVSPGAAAARVDYVSLEAVKSERPELTEARVVVSGGSDQGAI
                     LPSTR"
BASE COUNT          455 a          901 c          850 g          392 t
ORIGIN      
        1 cgaaccgcga gcactccgcg tagatgcccg gaaagcggcg ctgcaagaag tcgcgcggct
       61 gatgcgtgat gtcgagcagc accgactccg agcccgtgcg cttcatctcg aagtcgatcg
      121 cccgcgccat tacgtctcgc ggcgccagat cgccgagcgg gtgatgcttc ttcatgaacg
      181 gctcgcccgt cggcagccgc aacgtggccc cttccccgcg cagcgcctcg ctgatgagga
      241 agctcttggc tttcggctcg tagagcaccg tcgggtgaaa ctgaaaaaac tccatgttgg
      301 cgacttcggc acccgcgcgg taggccatcg cgatgccgtc gccggtcgcg acgtcggggt
      361 tcgacgtgta aaggtacact ttgccggcgc cgcccgtcgc gagcacggtc gcgcgcgcca
      421 ccacggtttc gacgacgccg cggcgttcgt cgagcacgta cgcgcccacg cactggtcgg
      481 ggccgccgaa tttgctcagc gtgatcagat cgatccccac gtgccactcg aggaggcgga
      541 tgttcggcga cgccttcacg gccgcgacga gcgcgcgctc gatttcacgc cccgtgaggt
      601 cgccggcgtg cacgatgcga cgctcgctgt gcgccgcctc gcgtccgaga tcgagctcgc
      661 cgtcgcccgc gcgcgaaaag ctcgccccga tttcggcgag ccagcgcacc gccgccggcg
      721 cgtcgcgcac gcaaagctcg acgacgatgt cgtggcagag cccggcgccc gcgccgatcg
      781 tgtcggccgc gtgcttctcg aacgagtctt ccgccgaaaa caccgccgcg acgccgcctt
      841 gcgcgtaagc cgttgcagcc tcgtccgcgg cgcgcttcgt gacgaccagc acttgaccgt
      901 agcgagcggc acgcaaagca aacgacagtc cggcgatgcc gctgccgagc acgagaaaat
      961 cggcggagag agtcacgacg ctgggggtta ctagcaagga atgcggacgt cgcatgcaaa
     1021 acgccgcgaa cgcccggggt tcggcctttt ggccggcgag agcggttgct cgagggccgc
     1081 ggggctggtg agataaggag gtgaaggtac tcgtttcgct caaacgcgtc gcggacccgg
     1141 acaacgcgaa caaagtcaaa atcgcggcct cgaacgtcgc cgtcgactcg acgggtctcg
     1201 aatggaagac caatccgttc gacgaatacg cgctcgaagc cgcgctccgc ctcaccgaaa
     1261 acggcaaggc accgaaacag cgcctcggcg aagtcgtcgt cgtgacgctc ggaccgaagg
     1321 agtgcgagca gacgctgcgc tctgcgctcg ccacgggcgc cgatcgcgcc atccgcgtgg
     1381 aggcgacgga cgacgccctc gacggacgtc tcgtcgctct cgcgctcaaa tcgctcgtgc
     1441 tcacggaaaa gccggacctc gtcttgctcg ggaaacaagc cgtggacggc gacagcaatc
     1501 aggtcggcca gcggctcgcg gagctgctcg attggccgat ggcgacgttc gcggcgacca
     1561 tccgcgagga agcgggcgcg ctcctcgtca gccgcgaagt ggacggcggc gtcggcacgc
     1621 tcagggtgcg gctgcccgcc gtcgtcaccg tcgatttgcg catcgtctcg ccgacgagcg
     1681 tgtactcggc gcacaccgac gccgcgcatc gctacgccga gggcgttcgt ttcgcgccgt
     1741 tgcccgccat catggcggcg aagaagaagc cgctcgacgt gaagacgctc accgagctcg
     1801 tgcccggcgc tgcgctctcc accaaaaccc tcaagttcga aaagccgccg gcacgttcgg
     1861 ccggcgtccg cgtcaaagac gtgaccgagc tcgtcgacaa gctgatgaac gtctcgaagg
     1921 tgctctgacc atgcctcacg ctctcgtcgt tgccgaaatc accgaagacg gcaaagtgaa
     1981 aaaggcgacg ctcgccgcca tcacgttcgc ccaaaaagcc ctgcccgccg tcggcggtgc
     2041 tttctcgatc ctcgtcctgg gcggcgccgc gcgcgcggcc gcggccgagc tcacgggctt
     2101 cggcgctcaa aaggtgctcg tgtgcgaaga tccgacgctc gccaagtata cggccgagca
     2161 ctacgccccc accgtcgccg aggtcggcaa gagcttcgct ttgctcgtcg ccaccgctac
     2221 gagccagggc aaggatctca tgccgcgcgt cgccgcgcgc ctcgacgcgg gcttcgcggg
     2281 cgactgttcg gacgtgttcg tcgaaggcac ggcgcttcgt tacaagcgcc cgatgtacgc
     2341 gggcaacgtg ttcggcaccg tcgagctcac gactcaagtc cacgtcgcga ccgcacgtca
     2401 gagcgagttc gacgcagccg caccctcggg tggcagctca cccatcgagc cgatcgccaa
     2461 ggttagcccc ggggcagcgg cggcacgggt ggactacgtg tccctcgagg ccgtcaagag
     2521 cgagcgcccc gagctcaccg aagcgagggt cgtggtctcg gggggcagcg atcaaggagc
     2581 aattcttcca agtactcg
//
LOCUS       DATIML010000056         2608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_300318, whole genome shotgun sequence.
ACCESSION   DATIML010000056 DATIML010000000
VERSION     DATIML010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300318"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VLJ38_00935"
     CDS             <1..191
                     /locus_tag="VLJ38_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009485198.1"
                     /note="catalyzes the transfer of an amino moiety;
                     preference for methionine followed by histidine and
                     phenylalanine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methionine aminotransferase"
                     /protein_id="HSU38087.1"
                     /translation="SALSRDDDLTFARKLTTEIGVAAIPLSPFYAEPPEQRLVRFCFC
                     KKSETLDAAAGRLARLAR"
     gene            complement(227..1120)
                     /locus_tag="VLJ38_00940"
     CDS             complement(227..1120)
                     /locus_tag="VLJ38_00940"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSU38088.1"
                     /translation="MDLNRALTFARVVEDGGFTAAARTLRVPKSSVSRSVALLEEELG
                     VRLLQRTTRKVELTEAGRVFYDRASRALAGLEDAEAAVSDLQASLRGTLRVTAPADAG
                     AGILAPLIARFVERHPGVHVECVLTARVVDLIAEGIDFAFRASKIADSSLVARRLLTR
                     DGALYAAPSYLARRGAPERVTDLAAHDCVMFRADQGRTRWALTGPLGEEVVEVHGPMS
                     ADDFAFVHQAALRGVGIALMPQFIAQPSTTRAELTRVLPEHLGLRGLWHLVYPSSRYL
                     PRRAAVFRDFVLAELAEPASG"
     gene            1241..1828
                     /locus_tag="VLJ38_00945"
     CDS             1241..1828
                     /locus_tag="VLJ38_00945"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HSU38089.1"
                     /translation="MTLSNTTTTPTSSTRNQAQKPAGTFAIDASHSHVGFAVRHMMVS
                     NVRGEFTKLSGTVSYDPTAPEATRVDVKIDVASLNTREEKRDAHLRSGDFFDAEHFPH
                     ITFVSKSARRRDDGLEVVGDLTIHGTAREVKLAVDDITAEHTDPWGGKRIGASARTKI
                     RRSDFGMRWNAALEAGGVLVGDEISIELEVELIRQ"
     gene            1892..>2608
                     /locus_tag="VLJ38_00950"
     CDS             1892..>2608
                     /locus_tag="VLJ38_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HSU38090.1"
                     /translation="MPGTIPATASADKERAASALARAVEYAERGVSAAPVVLCAPEDI
                     ASLDALAVRRELDRVMMGEHADLGLDALLVTGVLDCLLPEVKAMVGFGDGEWRHKDVW
                     KHTKQVVIQSVPRLEVRYAALFHDIGKVRTRSISPDGEVHFFGHAEVGARMFDKLERR
                     ERLFASDENLRSTVRFLVLHHLRASQYDGKWTPSAIRRFTREMGARLDDLLCLSRADI
                     TTKRPEKKRRGVALIDELGEK"
BASE COUNT          474 a          883 c          857 g          394 t
ORIGIN      
        1 attcggcgct ctcccgcgac gacgatctca ccttcgcgcg caagctcacg accgaaatcg
       61 gcgtcgccgc catcccgctc tcgccgtttt atgcagagcc cccagagcaa cgactcgtgc
      121 gcttctgctt ctgcaaaaag agcgagaccc tcgacgccgc cgctggacgc ctcgcacgac
      181 tcgcgcgctg acgcgggacc gcggacctcc cggacggcgc gccgactcac ccgctcgccg
      241 gctcggcgag ttcagcgagc acgaagtcac gaaacaccgc ggcgcgccgc ggcaagtagc
      301 gactcgacgg atacacgagg tgccagaggc cgcgcagccc gagatgctcg ggaagcacgc
      361 gcgtgagctc agcgcgtgtg gtgctcggtt gcgcgatgaa ttgcggcatt agcgcgatgc
      421 ccacgccgcg cagcgccgcc tgatgcacga acgcgaaatc gtcggcgctc atgggtccgt
      481 gcacttcgac gacctcctcg cccagagggc ccgtgagcgc ccagcgggtg cgaccttggt
      541 cggcgcggaa catcacgcag tcgtgtgcgg cgaggtctgt gacgcgctcg ggtgcgccgc
      601 gtcgcgcgag gtaactcggc gcggcgtaga gggcgccgtc acgcgtaagg agtcgccgag
      661 ctacgagcga cgaatcggct attttcgacg cgcggaacgc aaagtcgatg ccttcggcga
      721 tcagatcgac gacgcgcgcc gtgagcacgc actcgacgtg gacgccggga tgacgctcga
      781 cgaaacgcgc gatcagcggc gccaagatcc ccgcgccggc gtcggcgggg gccgtcacgc
      841 gcagcgtgcc gcgcagcgaa gcctgtaagt cggagacggc cgcctccgcg tcttcgagtc
      901 ctgcgagggc acgcgaagca cggtcgtaaa agacgcgacc cgcctcggtg agctcgacct
      961 ttcgcgtcgt gcgctggagt aggcgcacgc cgagctcctc ttcgagcagc gcaacggagc
     1021 ggctgaccga cgacttcggt acacgcaggg tgcgcgccgc cgccgtgaag cccccgtcct
     1081 cgaccacgcg ggcgaacgtc agggctcggt tcaaatccat tgttcgtatt ttgacaacag
     1141 ttagttccaa aaacaacggc tagttctaca ggcagcaacg gaccagattg tttggaccgg
     1201 acgccagaaa ttgcatgcgc cccccgaagg agcagtaacc atgaccctca gcaacaccac
     1261 gaccaccccg acttcctcca cccgcaacca ggcccaaaag cccgcgggca ccttcgcgat
     1321 cgacgcatcc cattcgcacg tcggcttcgc cgtgcggcac atgatggtga gcaacgtgcg
     1381 tggcgagttc acgaagctct cgggcacggt gagctacgac ccgacagccc ccgaggcgac
     1441 ccgagtcgac gtgaagatcg acgtggcttc tttgaacacg cgcgaggaga aacgcgacgc
     1501 ccacctgcgc agcggcgact tcttcgacgc ggaacacttc ccgcatatca cgttcgtttc
     1561 gaagagcgcg cgccggcgcg acgacggcct cgaagtcgtc ggtgacctca cgatccacgg
     1621 caccgcgcgc gaggtgaagc ttgccgtcga tgacatcacg gccgagcaca cggatccctg
     1681 gggcgggaag cgcatcggcg cctccgcgcg caccaagatc cgccgctcgg atttcggcat
     1741 gcgctggaac gccgcgctcg aagcgggcgg cgtgctggtc ggcgacgaaa tctccatcga
     1801 gctcgaggtc gagctgattc ggcagtaaaa ccgccatccg gcgtggagtt gtcgtaaaat
     1861 cgggggccgg tgctaaaagg ccggccccgc gatgcccgga acgatccctg ccaccgcttc
     1921 cgccgacaag gagcgcgccg cgagcgctct cgctcgcgcg gtggagtacg ccgagcgcgg
     1981 tgtttcggct gcgcccgtcg tgttgtgtgc gcccgaggac attgcgtcgc tcgacgccct
     2041 cgcggtgcgg cgcgagctcg accgcgtgat gatgggcgaa cacgccgacc tcggcctcga
     2101 cgccttgctc gtcacgggcg tcctcgactg cctgttgccc gaggtcaagg cgatggtcgg
     2161 cttcggcgac ggcgagtggc gccacaagga cgtgtggaag cacacgaagc aggtggtgat
     2221 tcaaagcgtc ccgcgcttgg aggtccgcta cgccgccttg ttccacgata tcggcaaggt
     2281 acgcacgcgc agcatttccc ccgacggcga agtgcacttc ttcggccacg cggaggtcgg
     2341 cgcgcgcatg ttcgacaagc tcgaacggcg cgaacgtttg ttcgcgagcg acgaaaattt
     2401 gcgcagcacc gtgcgctttc tcgtgctgca ccacctgcgc gcgagccagt acgacggcaa
     2461 gtggacgccg agcgcgatcc ggcgctttac ccgcgaaatg ggcgcgcgct tggacgacct
     2521 tttgtgtttg tcgcgcgcgg atatcacgac gaagcggccg gaaaaaaagc ggcgtggcgt
     2581 cgcgctgatc gacgagctcg gcgaaaag
//
LOCUS       DATIML010000057         2433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4920399, whole genome shotgun sequence.
ACCESSION   DATIML010000057 DATIML010000000
VERSION     DATIML010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4920399"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2246)
                     /locus_tag="VLJ38_00955"
     CDS             complement(<1..2246)
                     /locus_tag="VLJ38_00955"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU38091.1"
                     /translation="MKPSALRRSSPNPRAFRVLLVEDEPARRKFGRSRLEQAGYEVET
                     AADAAEAFERAATEPPDAILSDVAMAASDGFGLCRRVREQPRLDSVPLILLSAHEDAE
                     RSPPRSVDAAAARIVERSPDFTAELSALRESLANRGGSNLRPPEVDRYEQLLSHNAEQ
                     ITRLIDEAQSAEERYRTLFEHANDAITLLTPDGIVLEANERWRTLIGLNPQAMVGRHF
                     HEFAPSDQEFSSIHDFYDAISAGVNRSGAVPLRSADGGVVYLEFSLSFIDVGGEHTIL
                     SIGRDVTVELLARRALAAAEERYRTLVERLPDVLWTCSAAGDIVFATPNLVDVLGYAA
                     VDLAAETVDERLARVHPDDRRAVREGVRACLEQNQPLDVECRVRHKRGHFLWLRNRVT
                     ASYERAGVRYLDGLLSNINDRKVLEESFHQAQKMEAIGRLTGGIAHDFNNILAAILAN
                     SDFLMQALHVDDPRHADAREIRVAAERAAALTRQLLAFSRRQVLEPAVVDLNSTVSGV
                     EKMLCRLIGEDISLTVVPGEALGSVRVDVGQLEQVIMNLVVNARDAMPTGGALCIETA
                     NVELTDRYPAHDVPVSPGAYVMVAVSDTGSGMDASVKRRLFEPFFTTKELGKGTGLGL
                     STCYGIVKQSGGYIFAESEPGQGSVFRIYLPRVDTDAAQGASRTDPPALEGHETVLLV
                     EDDPRVRSAVKRMLELYGYRTLVAADGDEAHAVADRHAGPIDVILTDVVMPGSSGPQI
                     AEGVRRRFG"
BASE COUNT          406 a          808 c          816 g          403 t
ORIGIN      
        1 ccgaagcgac gccgcacacc ctctgcgatt tgcggcccgc tcgagcccgg catcacgaca
       61 tcggtcagta tcacgtcgat cggccccgcg tggcggtcgg cgacggcgtg cgcttcgtct
      121 ccgtccgcgg cgacgagcgt gcggtagccg tagagctcga gcatgcgctt gacggccgag
      181 cgaacgcgcg gatcgtcttc gacgagcagc acggtttcgt ggccctcgag cgccggagga
      241 tcggtgcggg atgcgccctg agcggcgtcc gtatcgacgc gcggcaagta aatcctgaac
      301 accgagccct gaccaggctc gctctcggcg aaaatgtagc cgccgctctg cttgacgata
      361 ccgtaacagg tcgacaagcc gagccccgtg cccttgccga gctccttggt cgtgaagaac
      421 ggctcgaaca agcgccgttt gacgctcgcg tccatgccgg accccgtgtc gctcacggcg
      481 accatcacgt aggcgccggg cgagacgggc acgtcgtgcg ccgggtagcg gtcggtgagc
      541 tcgacgttcg cggtttcgat gcacagcgca cccccggtcg gcatggcatc ccgggcgttg
      601 acgaccaggt tcatgatcac ttgttcgagc tgacccacgt cgacgcgcac ggagccgagc
      661 gcctcacccg gcacgaccgt gagcgaaatg tcctcgccga tcaggcgaca gagcatcttc
      721 tcgacgccgc tcacggtgga gttcagatcc acgacggccg gctcgagcac ctgccggcgg
      781 ctgaacgcga gcaactggcg cgtgagcgcg gcggcccgtt cggccgcgac ccgaatctcg
      841 cgtgcgtcgg cgtgtcgagg atcgtcgacg tgcagggctt gcatcaaaaa gtcgctgttc
      901 gcaagtatcg ccgccaaaat gttgttgaag tcatgggcga tgccgcccgt cagccgtccg
      961 atggcttcca tcttctgagc ctggtggaag ctctcctcga gcaccttgcg atcgttgatg
     1021 ttcgagagca gcccgtcgag atagcgcacg ccggcacgtt cgtaactcgc cgtgacgcga
     1081 tttctgagcc acagaaaatg gccgcgcttg tggcggacgc gacattccac gtcgagcggc
     1141 tggttctgct cgaggcaggc gcgcacgcct tcgcgtacgg cgcggcggtc atcgggatgc
     1201 acgcgcgcga ggcgctcgtc gaccgtctcg gcggcgagat cgacagcggc atagccgagc
     1261 acgtcgacca ggttcggcgt cgcgaagacg atgtctcccg cggcgctaca ggtccagagc
     1321 acgtcgggca gccgctcgac gagcgtgcgg taacgctcct ccgccgcggc gagggcgcgc
     1381 cgcgcgagga gctcgaccgt gacgtcgcga ccgatcgaca agatcgtgtg ctcgccgccc
     1441 acgtcgatga aggacaacga aaattcgagg tagacgacgc cgccatcggc gcttcggagc
     1501 ggcacggccc cggagcggtt cacgcccgcg ctgatggcgt cgtaaaaatc gtggatgctc
     1561 gaaaattcct ggtccgaagg cgcaaattcg tgaaaatgac ggccgaccat ggcttgcggg
     1621 ttcaagccga tgagcgtgcg ccagcgctca ttcgcttcga gcacgatgcc gtcgggcgta
     1681 agcagcgtga tggcgtcgtt cgcgtgctcg aacagcgtgc ggtaacgctc ttctgcgctc
     1741 tgtgcctcgt cgatcagacg cgtgatctgc tccgcgttgt gcgagagcag ctgttcgtaa
     1801 cggtcgactt cgggcggccg gaggttcgag ccgccgcggt tcgccagcga ctcgcgcaag
     1861 gcgctgagct ccgccgtgaa gtccgggctg cgctcgacga tgcgcgccgc cgcggcgtct
     1921 acagagcgag gcggactccg ctccgcgtcc tcgtgagccg acagcaggat cagcggaacg
     1981 gaatcgaggc gaggttgctc gcgcacgcgg cggcacaacc cgaagccgtc gctggcggcc
     2041 atggccacgt cgctcaagat cgcgtcggga ggctccgtag ccgctctttc gaacgcttcg
     2101 gcggcgtcgg cggcggtctc gacttcgtag ccagcctgct ctaggcgcga gcggccgaat
     2161 ttacgtcgtg ccggctcgtc ctcgacgagc agcacgcgga acgcacgagg attcgggctc
     2221 gagcgcctga gcgcggaggg cttcatagcc gagcctcggc ttcgatgcct cgcggcttgg
     2281 aagccggaac cgactgcgtt ttgcgaaaag cgcgaaccct catgccctcg ctgcctgcgc
     2341 ccggacacct ggtgcggcgc cggactcata cgtctagccc cggccggcgc gcagctctag
     2401 cccaggcaaa aatcgcgtta taaaacccgc ctt
//
LOCUS       DATIML010000058         2528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1455076, whole genome shotgun sequence.
ACCESSION   DATIML010000058 DATIML010000000
VERSION     DATIML010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455076"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1323
                     /locus_tag="VLJ38_00960"
     CDS             <1..1323
                     /locus_tag="VLJ38_00960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38092.1"
                     /translation="TGGTSTGGTSTGGSGGTTGGSATGGTSTGGSGGTTGGSVSAGGT
                     AGSTGGTGQARMSSGGTTGGSVSTAGASGTATGGAGGSGTSTGGSTSSGGHPSGGSPG
                     QGGMSGSSAGGMVGGAGTGNSVSICKFASGLNVAWVNFASDVPNPDLNTFKTIFKNTH
                     DAGGRVVRWWFHTNGTVTPGYDSSGLAQPLPQSHIDGIKAILSAAHDAGVVIDLSLWS
                     FDMLQSNAGDAHTNNQKLLENDANRQAYIDNYLTPLVNAIKGTPGLYSWEIFNEPEGM
                     APSGWATYKTTVAAIQKTVNWFAAAIHTADPKALVTNGAQTFDYCSAVSGKTNYYSDT
                     ALIQAGGKQNGTLDFYEVHYYSQNVASDSAFTHPASYWKLDKKLVIGEFAAADTDMVA
                     QNDLYTNLYTNGYDGAWAWSYNADWKWPAMQAPMQALFTAHADVGNCP"
     gene            1320..1889
                     /locus_tag="VLJ38_00965"
     CDS             1320..1889
                     /locus_tag="VLJ38_00965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38093.1"
                     /translation="MNDAARRRTFTFTAAAVVLGAVLAVTRQRASTPQPARTETPVAP
                     TPPSDTPPVAETASTPSASAAPLTASARPIPPARDASATFDEAELMRELRSARGNDPA
                     LAAELAREGNRRFPASPAAPERASILIHALSEQGLNSEARAEAEDMVNRYPDSHWVQE
                     IERFTGAHRHRNVRVDEQGRLRFYDPAPG"
     gene            complement(1972..>2528)
                     /locus_tag="VLJ38_00970"
     CDS             complement(1972..>2528)
                     /locus_tag="VLJ38_00970"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HSU38094.1"
                     /translation="SYVFGKADRQVKLILLDGRYHRELPGERADTLGETQWAWFEQEL
                     KSSTARVNIVTSGYQVLPLDHSNEKWGNFPAARARLLELIAEARTPGVVLMSGDRHFA
                     ELSCLTGGPLGYPLYELTSSGLTHAYDNADEPNRYRVGALYPHRNFGALRVDWAAGTL
                     TLEARAVGGAAVIRQSVALSALST"
BASE COUNT          469 a          896 c          813 g          350 t
ORIGIN      
        1 accggtggga cttcgacggg cggcacttcg acgggcggct ccggcggcac gacgggcggc
       61 tccgcgaccg gcggtacttc gacaggcggc tccggcggca cgacgggcgg ctccgtcagc
      121 gccggaggca cggccggcag caccggcggc actggccaag cgcgcatgag ctcgggcggc
      181 acgacgggcg gctccgtcag caccgccggg gcgagcggaa cagcgacggg cggcgcggga
      241 ggcagcggca cctcgaccgg cggctccacg agcagtggcg gtcacccgag cggcggctct
      301 ccgggccaag gcggaatgag cggctcgagc gccggcggca tggtcggcgg cgcgggcacg
      361 ggcaacagcg tcagtatttg caaattcgcg agcggcctca acgtcgcgtg ggtgaacttc
      421 gcaagcgacg tcccgaatcc cgatctcaat accttcaaaa ccatcttcaa gaacacgcac
      481 gacgcgggcg gacgcgtcgt gcgctggtgg ttccacacga acggcaccgt aacccccggg
      541 tacgactcct cgggcctcgc gcagccgctc ccgcagtccc acatcgacgg catcaaggcc
      601 attctcagcg ccgcgcacga cgcgggcgtc gtcatcgacc tgagcttgtg gtcgttcgac
      661 atgcttcagt cgaacgccgg tgacgctcac accaataacc aaaaactgct cgagaacgac
      721 gcgaaccgtc aagcgtacat cgacaactac ctgacgccgc tcgtcaacgc gatcaaaggc
      781 acccccggcc tctactcgtg ggaaatcttc aacgagcccg aaggcatggc accgagcggc
      841 tgggccacct acaaaaccac cgtcgccgcc atccaaaaaa ccgtcaactg gttcgccgcc
      901 gcaatccaca cggccgaccc gaaagcgctc gtcaccaacg gcgcccaaac cttcgactac
      961 tgctccgccg tctccggcaa aaccaactac tactccgaca ccgcgctgat tcaggcgggc
     1021 ggcaaacaaa acggcacgct cgatttctac gaggtgcact actactccca gaacgttgcg
     1081 tccgactccg ccttcacgca ccccgcttcg tattggaagc tcgacaaaaa gctcgtgatc
     1141 ggagagtttg cggcggcgga caccgacatg gtcgctcaaa acgacctgta cacgaacctg
     1201 tacacgaacg gctacgacgg ggcctgggcc tggtcataca acgccgattg gaaatggccc
     1261 gcgatgcaag cgcccatgca agcgctcttc acggcccacg ccgacgtcgg caactgccca
     1321 tgaacgacgc cgcacggcgg cgaacattca cgttcacggc cgcggccgtg gtgctcggcg
     1381 ccgtgctcgc cgtcacgcga cagcgcgctt ccacgccgca gcccgcgcgc accgaaacgc
     1441 ccgtcgcgcc gacgccaccg agcgacacgc cgcccgtcgc cgaaaccgcg agcacgcctt
     1501 cagcctccgc tgcgccactc acggcttccg cgcgcccaat tccgcccgct cgtgacgcct
     1561 cggcgacctt cgacgaagcc gagctcatgc gcgagctccg gagcgcgcgc ggcaacgacc
     1621 cggcgctcgc ggccgagctc gcccgcgaag gcaaccggcg cttcccggcg agccccgctg
     1681 cgccagaacg cgcgtcgatt ctgattcacg cgctgagcga gcaaggactc aactccgaag
     1741 cgcgcgctga agccgaagac atggtcaatc gctatcccga ctcgcactgg gtccaggaga
     1801 tcgagcgctt cacgggggcg caccggcata ggaacgtgcg ggtggacgag caggggcggt
     1861 tacggtttta cgatccggcg ccggggtgac gagctcgggt tacgcgccgc gtggagcagt
     1921 cgccgctcga atcagaccca aatcagcgag ggcgacgctt cagcgctccg gtcacgtcga
     1981 aagcgccgac aacgccacgc tttgccgaat cacggccgcg ccgcccaccg cgcgggcctc
     2041 gagcgtcagc gtgcccgcag cccaatcgac gcgcagcgcg ccgaagttgc ggtgcggata
     2101 gagcgcgccc acgcggtaac gattcggttc gtcggcgttg tcgtacgcat gcgtgaggcc
     2161 gctcgaggtg agctcgtaga gcggatagcc gagggggccg cccgtcaagc acgagagttc
     2221 ggcgaagtgg cggtcgccgc tcatgaggac cacgcccggc gtgcgcgcct cggcgatgag
     2281 ctcgagcagg cgcgcgcgcg ccgcggggaa gttgccccac ttttcgttcg aatggtcgag
     2341 cggtaggacc tggtagccgg acgtgacgat gttcacgcgc gcggtcgagc tcttgagttc
     2401 ttgctcgaac cacgcccatt gcgtctcccc gagtgtgtcg gcgcgttcgc ccgggagctc
     2461 gcggtgatag cggccgtcga gcaggatgag cttcacttgg cgatcggctt tgccgaagac
     2521 gtagcttg
//
LOCUS       DATIML010000059         3727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1166615, whole genome shotgun sequence.
ACCESSION   DATIML010000059 DATIML010000000
VERSION     DATIML010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3727
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1166615"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..863
                     /locus_tag="VLJ38_00975"
     CDS             78..863
                     /locus_tag="VLJ38_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002639611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSU38095.1"
                     /translation="MSDLIVTEDGPVAVLTLNRPDKLNALDAALLAEIARVALELSAR
                     PTSSRPRVAIITGAGERAFAAGADVAELSRLTPAEARAVSANGHRTGRALEEAPFPVI
                     AAVNGFALGGGCELALACDFIYGSDKARFGQPEVALGLVPGFGGTQRLARRVGIGHAR
                     ELVFTGAPIDATRAKAMGLVNEVVPHAELMTRVQAVARQIAERPPLAVAAAKRLLLHG
                     PEADLRVACELETEAFGALFATHDAREGTRAFLEKRSPAFDGT"
     gene            865..2637
                     /locus_tag="VLJ38_00980"
     CDS             865..2637
                     /locus_tag="VLJ38_00980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38096.1"
                     /translation="MKPSLSAFVTLVCASLLSGCRSCSDEKPYTPFGTTTALPAPEPG
                     PSGSSTPSAPSASASAAPAAEKSVLAPAGSQHWQLGEQSLDAPPGYDFEQGIQATFGA
                     RTPETVAWLAPDATDAGPRAAGELWLFPTSGAPRRLAAVPGFVPSGPGCKLVTALART
                     GPRTLTFDTQGECAGSLIARSPVRALVVVAPDADPPELLSLRAALPAPGETLDFSVDT
                     SDRDGDGRDDIAVEVSGGAAGTKASAPFVWFDRPAGPSRDSGEPGRTLARVTAALVSR
                     AKTKKLVEDVALSTSNVRRLLASICAEGATPRLLDLDANPLSCGALAPVLDSLATSEV
                     TAELTGGRVLEAFGALARDGWYFGKTSASVHQKLERLVLEAIEPATAVVKVLEPLPAG
                     LERAPRYSPLAFDAAGGVLVQTVAGVVRTEPDGSSPSAPDPAKARPLDVFPAPGQRWA
                     GVTYSCDRSEVMLSVEGAQPLVTALLSARPGVCGHAPFWSSATPPPVSAGGGKIRAIV
                     GGSVVGDAAEQPVPLGAARSADGKWTVVPTSFGLLVDGPVHRLVNVGASVPAPATLTD
                     CVVHTTGKAVACVHKRQALLFMIP"
     gene            complement(2643..3212)
                     /gene="efp"
                     /locus_tag="VLJ38_00985"
     CDS             complement(2643..3212)
                     /gene="efp"
                     /locus_tag="VLJ38_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HSU38097.1"
                     /translation="MDTSDIRKGLKVLMDGQPYIVTDFQFVKPGKGQAFTRTKLKNML
                     TGGTIERNIRSSEKLEAADVEDRTLQYIYPEGDTFVFMNSQTGDQVHVHKDAVGDEAG
                     FLIDGIDVTITIYNGNPVSISLPPHIVVQITETEPGVRGDTATNVTKPAKISTGATVN
                     VPLFVNEGDWIRVDTRTRSYLERAKPPAS"
     gene            3397..>3727
                     /locus_tag="VLJ38_00990"
     CDS             3397..>3727
                     /locus_tag="VLJ38_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38098.1"
                     /translation="MDEYELEEIKREIVESRSLSIKTNNLVNALASDVKSIAKRHQMQ
                     ERRLIVNTATAYVVTIAVVLGFVKLAWDLRLDAVRSETRAAEERATALDKQLKALQTR
                     DEGVVRAR"
BASE COUNT          558 a         1343 c         1259 g          567 t
ORIGIN      
        1 aagagcgggc gtgggtttta ccgctacgat ccgcagggca atcgcctgga accgtcgctg
       61 gcaggctgga gcagagcatg agcgacctca tcgtcaccga agacggcccc gtcgccgtcc
      121 tcacgctgaa ccgccccgac aaactgaacg ccctcgacgc cgcgctcctc gccgaaatcg
      181 cgcgcgtggc gctcgagctc agcgcccgtc cgacgagctc acgaccgcgc gtagccatca
      241 tcaccggtgc gggcgagcgc gcgttcgcgg ccggagccga cgtcgccgag ctctcccgcc
      301 tcacaccggc cgaagcacgc gccgtgagcg ccaacggcca tcggacggga cgcgcgctcg
      361 aagaagcgcc gttccccgtg atcgcggccg tcaacggctt cgcgctcggc ggcggttgcg
      421 agctcgcgct cgcgtgcgac ttcatttacg gctccgacaa ggcacgcttc gggcagccgg
      481 aagtcgcgct cggactcgtc cccgggttcg gcggcacgca gcgcctcgcg cggcgcgtcg
      541 gcatcggaca cgcgcgcgag ctcgtgttca cgggcgcgcc catcgacgcc acgcgggcca
      601 aagcgatggg gctcgtcaac gaagtcgtgc cgcacgccga gctcatgacg cgcgtccaag
      661 cggtcgcgcg tcaaatcgcc gaacggccgc cgctcgccgt cgcggccgct aaacggctgc
      721 tcttgcacgg ccccgaagcg gacttgcgcg tggcctgcga gctcgaaacc gaggccttcg
      781 gcgcactctt cgccacccac gacgcgcgcg aaggcacccg cgctttcttg gaaaagcgct
      841 cgccggcgtt cgacggcacc tgacgtgaag ccgagcctca gcgcgttcgt cacgctcgtt
      901 tgcgcctcgc tgctcagcgg ctgccggagc tgcagcgacg agaagccgta cacgccgttc
      961 ggcaccacca ccgccctgcc ggcgcccgaa ccgggtccgt ccggatcgag cacgccgagc
     1021 gcgccctccg cctcggcgag cgccgctcca gccgcggaga agtcggtgct cgcgcccgcc
     1081 ggcagccagc actggcagct cggcgagcaa agcctggacg cgccgccggg ttacgatttc
     1141 gaacagggca tccaagcgac ttttggtgcg cgcacaccag aaacggtggc gtggctcgcc
     1201 ccggacgcga cggacgccgg cccccgcgcc gcgggcgaac tctggctttt tcccacgagc
     1261 ggcgcgccgc gtcggctcgc cgcggtgccg ggattcgtgc cgagcggccc ggggtgcaag
     1321 ctcgtgacgg cgctcgcgcg caccgggccg cgcacgctga ccttcgacac gcagggcgag
     1381 tgcgccgggt cgctcatcgc gcgctcaccc gtacgcgccc tcgtcgtggt cgcgcccgac
     1441 gccgatccgc ccgagctctt gagcctgcgc gccgccctgc ccgcacccgg cgaaacgctc
     1501 gatttcagcg tcgatacgag cgatcgcgac ggcgacgggc gcgacgacat agccgtcgag
     1561 gtgagcgggg gcgccgcggg gacgaaagcg agcgcgcctt tcgtgtggtt cgatcgcccc
     1621 gccggtccct cgcgcgacag cggcgagccc ggtcgcacgc tcgcgcgcgt gacggccgcg
     1681 ctcgtctcgc gcgccaaaac gaagaagctc gtggaagacg tggcgctgag caccagcaac
     1741 gtgcggcgcc tactcgcgag catttgcgca gaaggcgcga ccccgcggct cctcgacctc
     1801 gacgcgaatc ccctcagctg cggcgcgctc gcgcccgtgc tcgactcgct cgccacgtcg
     1861 gaagtaacgg cggagctcac gggcggccgc gtgctcgagg cgttcggcgc gctcgcacgc
     1921 gacggctggt atttcggcaa aacgtcggcg agcgtgcatc aaaagctcga gcgactcgtg
     1981 ctcgaggcca tcgagcccgc gacggccgtc gtcaaggtgc tcgagccatt acccgccggc
     2041 ctcgagcgcg cgcctcgcta cagtccgctc gccttcgacg cggccggcgg cgttctcgtt
     2101 cagacggtcg cgggcgtcgt acgcaccgag ccggacggtt cctcgccgag cgcgcccgac
     2161 ccggcgaagg cgcggccact cgacgtgttc cccgcgccgg ggcaacgctg ggcgggcgtc
     2221 acttactcgt gcgaccgctc cgaggtgatg ctttcagtcg agggcgcgca gccgctcgtc
     2281 acggcactct tgtcggcgcg gccgggggtc tgcggtcacg cgccattctg gtcgagcgcc
     2341 acgccgccgc ccgtgagcgc cggtggcggc aaaatacgcg cgatcgtggg cggctcggtc
     2401 gtcggggacg ccgcggagca gccggtgccg ctcggtgccg cgcgctcggc cgacggcaag
     2461 tggacggtcg tgccgacgag cttcgggctc ctggtcgatg gcccggtgca tcggctcgtg
     2521 aacgtcgggg cgagcgtacc ggcgccggcc acgctcaccg attgcgtcgt ccacacgacg
     2581 ggaaaagccg tcgcttgcgt gcacaagcgc caagcgctct tgtttatgat cccgtaaacc
     2641 cgtcagctgg cgggcggctt ggcgcgctcg aggtagctgc gcgtgcgcgt atccacccgg
     2701 atccagtcgc cctcgttgac gaacagcggc acgttgacgg tcgcgcccgt ggagattttt
     2761 gcgggtttcg tcacgttggt cgccgtgtcg ccgcgcacgc ctggctcggt ttccgtgatc
     2821 tggaccacga tgtgcggcgg gagcgagatg ctcacgggat tgccgttgta aatcgtgatc
     2881 gtcacgtcga tgccgtcgat cagaaagccg gcctcgtcgc cgaccgcgtc cttgtgcacg
     2941 tgcacctggt cgccggtctg cgagttcatg aacacgaagg tgtcgccttc gggatagatg
     3001 tactggagcg tgcgatcttc gacgtcggcc gcctcgagct tctcgctcga gcggatgttg
     3061 cgctcgatcg tgccgcccgt gagcatgttc ttgagcttgg tgcgggtgaa ggcctgaccc
     3121 ttgccgggct tcacgaactg aaaatcggtc acgatgtacg gctggccgtc catcagcacc
     3181 ttcaagccct tgcgaatatc gctcgtgtcc atcgtctttt tcctaagttc ctcgggatcc
     3241 tggcccggcc gaaacgcccg ctctcgggcg ccggggctct gaacgcccgc aggcaaccgt
     3301 cacgcggacc gccatctaca tcaaagtcgc ccttttggcg agccttgccc tcccgcagcc
     3361 gaggcgatag gtcccggaac ccctgaaagc tgggccatgg acgagtacga gctcgaggag
     3421 atcaagcggg aaatcgtcga aagccgctcg ctttccatca agacgaacaa cctggtgaac
     3481 gcgctcgcct ccgacgtgaa gagcatcgcg aagcgccacc agatgcagga gcgtcgcctg
     3541 atcgtgaaca cggcgacggc ctacgtcgtc acgatcgcgg tcgtgctcgg cttcgtcaag
     3601 ctcgcctggg atctgcgcct cgacgccgtg cgctccgaga cgcgcgccgc cgaagagcgc
     3661 gcgacggcgc tcgacaagca gctcaaggcg ctgcagaccc gcgacgaagg cgtcgtgcgc
     3721 gcccgaa
//
LOCUS       DATIML010000060         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2610485, whole genome shotgun sequence.
ACCESSION   DATIML010000060 DATIML010000000
VERSION     DATIML010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2610485"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1565
                     /locus_tag="VLJ38_00995"
     CDS             <1..1565
                     /locus_tag="VLJ38_00995"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU38099.1"
                     /translation="RRVYCAVMRDPSEIEHAERAALESEQRFRTLADAAFEGIVITEA
                     GRIVDCNEQLAQILGAEARTLIGQRVTEMIAPEWRERIAERFRAGLGEPFEHVMLRSD
                     GTRFEAESQAKTLTLGARTLRVTALRDISKRKQLEDQLKRSQRLESIGRLAGGIAHDF
                     NNLLTVVLGVVELLLAEPRPPQDEEDLKQLRAAGQRAAELTQQLLAFARRRIVAPKVV
                     DLNALVTDLDKMLRRLLGEHITLVSVRAPELGAVRADPGQLEQVVVNLAINARDAMSR
                     GGTLTLETANVELDGDYAATHPEVSAGDYVMLAVSDTGSGIDQATLEHIFEPFFTTKF
                     ERGSGLGLSTCYGIAKQSGGSLWVYSELGAGTVFKLYLPRVYAPLDQRNAREAPPVRG
                     GTERLLLTEDDPMVRPVAVRALREHGYEVHDAASPREARALFARFEGRFDALITDVRL
                     PEMTGRELAELLCADNPRLRVLYTSGYTENTIVHHGVVDGGIDFLPKPYVSTELARRV
                     RELLDRDGPPDG"
BASE COUNT          275 a          577 c          525 g          237 t
ORIGIN      
        1 gcaggcgtgt ttactgcgcc gtcatgcgcg atccgagcga aatcgagcac gccgagcgcg
       61 ccgcgctcga aagtgagcag cgcttccgca cgctggccga cgccgcattc gagggcatcg
      121 tcatcaccga ggccggacgt atcgtcgatt gcaacgaaca gctcgctcaa atcctcggcg
      181 ccgaggcgcg gacgctgatc ggccagcgcg tgaccgagat gatcgccccc gagtggcgcg
      241 aacgcatcgc cgagcgcttc agggccgggc tcggcgagcc cttcgagcac gtgatgctcc
      301 gctccgacgg cacgcgcttc gaagccgaat cgcaggccaa gaccctgaca ctgggcgctc
      361 gtactctcag ggtgacggcg ctgcgcgaca tctcgaagcg caagcagctc gaggatcaac
      421 tcaagcgctc gcaacggctc gaaagcatcg ggcggctcgc gggcggcatc gcccacgatt
      481 tcaacaacct gctcacggtc gtgctcggcg tggtggagct actgctcgcc gagccccgcc
      541 cgccgcaaga cgaagaagat ttgaagcaat tgcgcgcggc gggacagcgg gcggccgagc
      601 tcacgcagca gctgctcgcg ttcgcgcggc ggcgcatcgt cgcccccaag gtcgtggacc
      661 tgaacgcgct cgtgacggac ctcgacaaga tgctgcggcg cctgttgggc gagcacatca
      721 cgctcgtcag tgtgcgcgcg cccgagctcg gcgccgtgcg cgccgatccc ggacagctcg
      781 aacaagtggt cgtcaatctc gcgatcaacg cgcgcgacgc catgagccgc ggcgggacgc
      841 tcacgctcga gaccgccaac gtcgagctcg acggcgatta tgcggcgacg catcccgaag
      901 tcagcgccgg cgactacgtg atgctcgccg tgagcgacac cggctccggc atcgaccaag
      961 ctacgctcga gcacatcttc gaacccttct tcaccaccaa gttcgaacgc ggcagcggcc
     1021 tcggactcag cacctgctac ggcatcgcca agcagagcgg cggttcgctc tgggtctaca
     1081 gcgagctcgg cgcgggcacc gtgttcaagc tttacctgcc gcgcgtctac gcgccgctcg
     1141 accagcgcaa cgcgcgcgag gcacccccgg tgcgcggcgg caccgaacgt ctgctgctca
     1201 ccgaggacga cccgatggtg cgtcccgtcg ccgtgcgagc cttgcgcgag cacggctacg
     1261 aggtgcacga cgcggcgagc ccgcgtgaag cccgcgcgct cttcgcgcgg ttcgaaggcc
     1321 ggttcgacgc gctcatcacc gacgtgcgct tgcccgagat gaccggccgt gagctcgccg
     1381 agctgctctg cgccgacaat ccgcggctgc gcgtgctcta cacgtccggc tacaccgaga
     1441 acacgatcgt gcaccacggc gtggtcgacg gcggcatcga ttttttgccc aagccttacg
     1501 tctcgacgga gctcgcccgg cgcgtgcgcg agcttctcga tcgcgacggc ccgcccgatg
     1561 gctgagcgcg ccgggctctg cgcccactag atcgaacacg aatgtttcga gccg
//
LOCUS       DATIML010000061         6736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1166869, whole genome shotgun sequence.
ACCESSION   DATIML010000061 DATIML010000000
VERSION     DATIML010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6736
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1166869"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VLJ38_01000"
     CDS             <1..435
                     /locus_tag="VLJ38_01000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38100.1"
                     /translation="KPLVLFWQTALLAKSNQLPGLVSQKAMDPNTYQAHFMREFPSTG
                     TLAALPDHVTVKLQLQAVGDDVLDSLIASGDLDPGVPSQIARYTLGGGAVLDWTPTAA
                     NVFQATDATSGAVMTCITSGAYESDTTPAISHARCAGLADAP"
     gene            complement(451..1473)
                     /locus_tag="VLJ38_01005"
     CDS             complement(451..1473)
                     /locus_tag="VLJ38_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HSU38101.1"
                     /translation="MTTGSLPTLEFVLKNYKNFNARATRDALLAYHRHMEAGGKMFWA
                     VAGAMSSAQLGITLAPAIRAGLIHGLSVTGANLEESLFRLVANQHYKDFPDYRYLTKS
                     DDTRILNDRMRRVTDTSIPEDEAFRAVEKFIVPMWKSATEKGDRRFWHEYFYELIQTI
                     PSSLYQGNPDECWLLAAAKARLPVVVPGHEDSTFGNIFASHVKLGDASASIVKSGIEY
                     MATFYDQYRELSTGAGVGFFQIGGGIAGDFPICVVPSIKYDLEQEAKPWAYFCQISDS
                     TTSYGSYSGATPNEKITWDKLTESTPMFVIESDATIVAPLVLSALLECKQDPAGAKAL
                     VQKYAK"
     gene            1599..4919
                     /locus_tag="VLJ38_01010"
     CDS             1599..4919
                     /locus_tag="VLJ38_01010"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38102.1"
                     /translation="MLSEALAGALTTLARALGSEPGLEAGLVSRWLPRSAARRSTPDL
                     GAGLDEAATRVATELPAVTQTDAGVTALSAFFADERAVPLLAWCAASTARRDVRLAPL
                     LPAALRHAALAERAVAVARDRVVAGPLLDALACAPLLGPGAELGSLANAPARARLEVL
                     IWEAGASALEVPALGAWLWRDEATFDALIRTPAHGSLRGRVLAARCLEISVSGLPPAA
                     DPELIGRTLQTLQPLLLHPEPLVWVHAARALGRLTGRLEYLEGTLLDWVLGESLVLRQ
                     RATTAFASLSAERLRFLASQLNALLDSPAEEAWVLAAVALATPYLYFERRALWDRLAK
                     RILKGDGGALAARALARGLATLFRRGHRTPEIQTALTELRELARSARPTSLDELRRWI
                     EVTAATDAVDGAERDPLDLELGLENLVRIAAQYDDEEADARAARFASTLAATFQEARR
                     IALGSGRLRQRAAAINAVEGCARAMALRLWAPLLATRPTGEPIDEPELAETWKMIANA
                     PATILDLVKERRQIEGADPNADLPLEVLALRLGGYALDACGEAADLGPGRGPTAHDTC
                     HWLRKLDGLADGSRELPPPLQAALSAIFWRLVDTTRGTALGEVDDVEWLGPFAAWWAL
                     VIDRPAMLLQLATALPMLAEGALARCCERAEVLRDSVASGGADGEWGPAAAEALESLH
                     AQSTELAHALSRLAAALARFAAAAGPKKDLEQLCIELVVAGERLQASLADPVKGLHGR
                     RGDAPGDSLSPPDAENAPRVAALVARAIRAREPAMLDVWFASLGPVASSLLEDAVRAA
                     IRRTPPPPPKARKSEPKLIEGYELIKPLGEGGVGSVWLVRRPGADRLFVLKIPKADAL
                     ANATDVERDGILASFVEEARVLAGLYHPNVANIIDRGISGGMPFLVLEYLIGADLKQY
                     ASAQLMSLFELRQIVIEACAGLAALHGAGLVHRDIKPANVWLRLPLASGEHFDPSKHR
                     DPARAQPLAAVVIDFGMVRAIRVPPDASGRFVAGTAGYIAPEQVLDPVELDPRSDVYA
                     LAATIYNVTTGRAFFDEIENQRDRIIAHMRRDPFEDVERLRPFPAAVAKLLRAATMRD
                     PAARPSPLEFGREFVTAI"
     gene            4963..5154
                     /locus_tag="VLJ38_01015"
     CDS             4963..5154
                     /locus_tag="VLJ38_01015"
                     /inference="COORDINATES: protein motif:HMM:NF040165.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38103.1"
                     /translation="MDALEADDREQALRLDPAEKLMQALEIMRAGIRLKRSTLRRQFP
                     EADEADVDRRLAEWLRSDG"
     gene            5147..5746
                     /locus_tag="VLJ38_01020"
     CDS             5147..5746
                     /locus_tag="VLJ38_01020"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HSU38104.1"
                     /translation="MAEPAPELALAAICRELVQLGRRFALVGGLAVSVRAEVRFTRDV
                     DIAVLVADDSDAESLTYQLRSAGYSAVASVEHETQHRHATVRLMSPSGVKVDLLFASS
                     GIEAEIVDKATTIDFGSAGPVPVANAEELLAMKVLSMTDTRLQDRIDAQRLLQFTPEL
                     DVGRVREHLARITARGYAREQDLEAKLELVLRDVGYVKR"
     gene            complement(5846..>6736)
                     /locus_tag="VLJ38_01025"
     CDS             complement(5846..>6736)
                     /locus_tag="VLJ38_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38105.1"
                     /translation="DPYALGFVHLARCYAFYMRSDFAAARAAGDEAEAVFESRPVMAF
                     WELTSARMLSIGSHFYDGDLRVIRRRIPVLIRDAERRGDVYAATCLRLGACNLAWVIG
                     DESGEARRQLRAANESWYYDGVHLQQCWSLAAWVHVDLYDGDADQAYARVHQAWHAIE
                     RSFIMRFERLRAELFWLRARAALASAERHPRHDSPALADAQHWGTRLLGEPAPWAPAA
                     GHLVLAGAHALRGSHVPARESLRRAVSLAATTGIGIIARTHAQWRGDEAHGLAAEVAR
                     PERWVRMIAPGLAQLRPGAV"
BASE COUNT         1065 a         2464 c         2173 g         1034 t
ORIGIN      
        1 aagccgctgg ttctcttctg gcaaaccgcc ctgctggcca agagcaacca gcttccgggt
       61 ttggtcagtc agaaggcgat ggacccgaac acgtatcagg cgcacttcat gcgcgagttt
      121 ccgagcacgg gcacgctggc ggccctcccg gaccacgtca cggtcaagct ccaactgcag
      181 gccgtcggcg acgacgtact ggacagcctg atcgccagcg gggacctgga ccccggcgtg
      241 ccgtcgcaga tcgcgcgcta cacgctgggc ggcggtgccg tcctcgactg gacgccgacc
      301 gccgccaacg tgttccaggc gacagacgcg accagcggcg cggtgatgac ctgcatcacg
      361 agcggcgcgt acgagagcga caccacgccc gcgatcagcc acgcccgctg cgccggtctc
      421 gcggacgcgc cgtagagcag cacttgcgac tcacttcgcg tacttctgaa ccagcgcctt
      481 cgcgcctgcc ggatcctgct tgcactcgag cagcgccgac aagacgagcg gcgcgacgat
      541 ggtcgcatcg gactcgatca cgaacatggg cgtcgattcc gtcagcttgt cccaggtgat
      601 cttctcgttc ggcgtcgcgc ccgagtacga gccgtacgac gtcgtcgaat ccgagatttg
      661 gcagaaatac gcccacggtt tcgcttcctg ctcgaggtcg tacttgatcg acggcacgac
      721 acagatcggg aaatcccccg cgatgccgcc gccgatctgg aagaagccga cgcccgcgcc
      781 cgtcgagagc tcgcggtact ggtcgtagaa ggtcgccatg tactcgatgc cgctcttgac
      841 gatgctcgcg ctcgcgtcgc cgagcttcac gtgcgaagcg aagatgttgc cgaacgtcga
      901 gtcctcgtgc cccggcacga ccacgggcag gcgtgccttg gccgcggcga gcagccagca
      961 ctcgtcggga ttaccctgat aaaggctcga cggaatcgtc tggatcaact cgtaaaagta
     1021 ctcgtgccaa aagcgccgat cgcccttttc ggtcgcgctc ttccacatcg gcacgatgaa
     1081 cttctcgacg gcgcggaagg cttcgtcctc ggggatgctc gtgtccgtca cgcggcgcat
     1141 gcgatcgttc aagatgcgcg tgtcgtccga tttcgtgagg taccgataat cggggaagtc
     1201 tttgtaatgc tgattcgcga ccaaccggaa cagcgactct tcgaggttcg cgcccgtgac
     1261 ggacaggccg tgaatcaacc ccgcgcgaat ggccggcgcg agcgtgatcc cgagctgcgc
     1321 cgacgacatc gcgcccgcga ccgcccaaaa catctttccc cccgcctcca tatggcggtg
     1381 ataggcaagg agcgcatcgc gcgtcgcgcg cgcgttgaaa ttcttgtagt tcttgagcac
     1441 gaactcgagc gtcggcagcg atccggtcgt catgccgccc cacgtaccct ggaccggccc
     1501 gcgaggccac tgtttcgagg gcgtcgccac tcgccgaatt cggctgtgtc cgcacgcgcc
     1561 gtttcgcgac gggcaaagcc gttctaaact agtcgatcat gctttccgaa gcgctggccg
     1621 gggctttgac gacgctggcg cgcgcgttgg gatccgagcc ggggttagag gcgggcttgg
     1681 tttcgcgctg gctgccgcgc agcgccgcgc gccgttccac cccggacctc ggcgcgggcc
     1741 tcgacgaagc ggcgacgcgc gtcgcgaccg agctacccgc cgtgacgcaa acggacgcgg
     1801 gcgtcacggc attgtcagca ttttttgccg acgagcgcgc cgtgccgctg ctcgcctggt
     1861 gcgcggcgag caccgcgcgc cgtgacgtac ggctcgcgcc gctgctcccc gccgcgctgc
     1921 gccacgccgc cctcgccgag cgcgccgtcg ccgtcgcgcg cgaccgggtc gtcgccggtc
     1981 ctttgctcga tgcgctcgcc tgcgcgccgc tgctcggccc gggcgcggag ctcggctcgc
     2041 tcgcgaacgc tccggcgcgc gcgcgcctcg aagtcctcat ctgggaagcc ggcgcgagcg
     2101 cgctcgaggt gccggcgctc ggcgcctggc tctggcgcga cgaagcgacc ttcgacgcat
     2161 tgatcaggac accggcgcac ggctcgctgc gcgggcgcgt gctcgcggcg cgctgtctcg
     2221 aaatttcggt ctcgggtttg ccgcccgcgg cggaccccga gctcatcggc cgcacgctgc
     2281 agacgctcca accgctgctc ctgcaccccg agccgctcgt gtgggtccac gcggcgcgcg
     2341 ccctcggccg cctcaccggc cgtctcgaat acctcgaggg cacactgctc gattgggtgc
     2401 tcggcgaatc gctcgttttg cggcagcggg ccaccacggc gttcgcctcg ctttcggccg
     2461 agcggctgcg cttcctcgcg agccaactca acgccctcct cgattcgccc gccgaagaag
     2521 cctgggtgct cgcggccgtc gcgctggcaa ccccgtacct ctatttcgag cggcgcgcgc
     2581 tctgggatcg cctcgccaaa cgcattctca aaggtgacgg cggcgccctc gccgctcgag
     2641 cgcttgcccg cggcctcgcg acgctctttc gacgcggcca ccgcacgccc gagatccaaa
     2701 ccgcgctcac cgaactccgc gagctcgcgc gctcggcgcg cccgacgtcc ctcgacgagc
     2761 tgcgccgctg gatcgaagtc acggccgcga ccgacgccgt ggacggcgcc gaacgcgacc
     2821 cgctcgacct cgagctcggc ctcgaaaacc tcgtgcgcat cgccgcgcag tacgacgacg
     2881 aagaagccga cgcacgcgcc gcgcgcttcg cgagcacgct cgccgccacg ttccaggaag
     2941 cgcgccgcat cgcgctcggc agcggccgcc tgcgccagcg cgccgccgcc atcaacgccg
     3001 tggaaggttg cgcgcgcgcc atggccctgc gcctgtgggc gccgctgctc gcgacgcgtc
     3061 ccacgggcga gcccatcgac gagcccgagc tcgccgaaac ctggaaaatg atcgccaacg
     3121 cgccggcgac gatcctcgat ctcgtcaaag agcggcgcca aatcgaaggt gcggatccga
     3181 acgccgactt gccgctcgaa gtgctcgcgc tgagactcgg cggctacgcg ctcgacgcct
     3241 gcggcgaagc ggcggatctc ggccccggtc gcggccccac ggcgcacgac acctgccact
     3301 ggctgcgtaa actcgacggc ctcgccgacg gctcgcgcga actcccgccg ccgctgcaag
     3361 ccgcgctgag cgccatcttc tggcgcttgg tcgacacgac gcgcggcacc gcgctcggcg
     3421 aagtggacga cgtcgaatgg ctcggcccct tcgcggcttg gtgggcgctc gtcatcgatc
     3481 gcccggcgat gctgctgcag ctcgcgaccg cgttacccat gctggcggaa ggcgcgctcg
     3541 cgcgctgttg cgaacgcgct gaagtgctcc gcgacagcgt cgcctcgggc ggcgccgacg
     3601 gcgaatgggg cccggccgcc gccgaagcac tcgagtcgct gcacgcccaa agcaccgagc
     3661 tcgcccacgc actgtcacgc ctcgccgcgg cgctcgctcg ctttgcggct gccgcgggcc
     3721 cgaagaaaga cctcgagcag ctctgcatcg agctcgtggt cgcgggcgag cggctgcaag
     3781 cgtcactcgc cgatccggtg aagggcctcc acggccgtcg cggagacgca ccgggcgact
     3841 cgctctcgcc gcccgacgcc gaaaacgcgc cgcgcgtcgc cgcgctcgtc gcccgcgcca
     3901 tccgtgcacg cgaaccggcg atgctcgacg tgtggttcgc gtcgctcggc cccgtcgcgt
     3961 cgagcctgct cgaagacgcc gtgcgcgccg cgatccgccg cacgcccccg ccgccgccca
     4021 aagcgcgcaa gagcgagccg aagctcatcg aaggctacga gctcatcaag ccgctcggcg
     4081 aaggcggcgt cggctccgtc tggctcgtgc gccgccccgg tgccgaccgt ctcttcgtcc
     4141 tcaagatccc caaagcggac gcgctcgcca acgcgacgga cgtcgaacgc gacggtattc
     4201 tcgcctcctt cgtcgaagaa gcgcgcgtgc tcgccggcct ttaccacccg aacgtcgcca
     4261 acatcatcga ccgcggcatc tcgggcggca tgcccttcct cgtcctcgaa tacctgatcg
     4321 gcgccgacct caagcaatac gcctcggcgc agttgatgtc cctcttcgag ctccgccaaa
     4381 tcgtgatcga agcctgcgcg ggacttgcgg ccctccacgg cgccggcctc gtccaccgcg
     4441 acatcaaacc cgccaacgtc tggctccggc tcccgctcgc gagcggcgaa cacttcgatc
     4501 cgagcaaaca ccgcgatccg gcgcgcgccc aaccgctcgc cgccgtcgtc atcgatttcg
     4561 gcatggtacg cgcaatccga gttcccccgg acgcgagcgg ccgcttcgtc gccggcaccg
     4621 cgggctacat cgcgcccgaa caagtgctcg accccgtgga gctcgacccg cgctcggacg
     4681 tgtacgcgct cgcggcgacg atttacaacg tgacgacggg gcgcgcgttc ttcgacgaga
     4741 tcgagaatca gcgcgaccgc atcattgcgc acatgcgtcg tgatcccttc gaagacgtcg
     4801 aacggctgcg gccgttcccg gcggccgtcg ccaagctgct acgcgccgca accatgcgcg
     4861 atccggcggc gcggccgtcg ccgctcgagt ttgggcggga gttcgtcacg gcgatttgag
     4921 aacgggatga cccgacctct cggctcgagt aaactgacag aaatggacgc actcgaggcc
     4981 gacgaccgtg agcaggctct ccgcctcgac cccgcagaga agctcatgca agcgctcgag
     5041 atcatgcgcg ccggcattcg gctcaagcga tcgacgctgc gtcggcagtt ccctgaagcg
     5101 gacgaagcgg acgtcgaccg ccgtctggcc gaatggttac gtagcgatgg ctgagcccgc
     5161 gcctgagctg gctctcgccg caatctgccg cgagctagtc cagctggggc gccgtttcgc
     5221 gctggtcggc gggcttgccg tttccgtgcg ggcagaagtg cgatttacgc gcgacgtgga
     5281 catcgccgtg ctcgtcgctg atgactccga cgcggagtcg ctgacgtacc aactgcgttc
     5341 ggcagggtac tctgcggtcg ctagcgtaga gcacgaaacg cagcaccggc atgcgaccgt
     5401 tcgccttatg tcgccgtcag gcgtgaaggt ggacctgctg ttcgccagct caggcatcga
     5461 ggccgagatc gtcgacaaag ccaccaccat cgactttggc agcgccggcc ccgtccccgt
     5521 tgccaacgcc gaagagctct tggccatgaa ggtcctcagc atgaccgaca ctcgactcca
     5581 ggatcgaatc gacgcccaac gcttgctgca gttcacgccc gagctcgacg ttgggcgcgt
     5641 gcgcgaacac ctcgcgcgaa ttacggcccg cggctatgcg cgcgagcaag atctcgaagc
     5701 aaagctcgag ctcgtcctcc gcgacgtcgg atatgtgaag cgttaggctg cgggcggtcg
     5761 ggggccgcac tgagcgccgc ggacgccttg agccgcatcc gacccgggtt gcgctcgccg
     5821 ggcggcctgc gacatcgaag cctcatcaaa ctgcaccggg tcggagctgt gccagcccgg
     5881 gcgcgatcat tcggacccag cgctcgggtc gggcgacctc cgccgcgaga ccgtgggcct
     5941 cgtcgccgcg ccattgcgca tgcgttcgag cgatgatccc gatcccggtc gtcgcggcca
     6001 ggctcacggc acgacgtaga ctctcacgcg cgggcacgtg cgagccgcgc agcgcgtgag
     6061 ctccggcgag cacgaggtga cccgcagctg gagcccacgg cgccggttcg cccagcagtc
     6121 gagtgcccca atgttgcgcg tcggcgagtg cagggctgtc gtgccgcggg tgccgttcgg
     6181 cggaggccag cgccgcgcgc gcgcgcagcc aaaagagctc cgcacgcagg cgttcgaagc
     6241 gcatgatgaa ggagcgctca atcgcgtgcc aagcttgatg cacgcgggcg taagcctgat
     6301 cggcgtcgcc gtcgtagagg tcgacgtgaa cccacgctgc gaggctccaa cattgttgga
     6361 gatggacgcc gtcgtagtac cagctctcgt tcgcagcacg gagctggcgc cgggcctccc
     6421 cgctctcgtc gccaatcacc cacgccagat tacaggcacc caagcgcaag caagtggctg
     6481 cgtacacgtc gccgcgtcgc tccgcgtcgc gaatcagcac gggtattctg cgccggatca
     6541 cgcgaaggtc gccgtcatag aagtgcgacc cgatcgacag catgcgagcg ctcgtcagct
     6601 cccaaaacgc catcacgggc cggctctcga acacggcctc ggcctcgtcc cccgccgcac
     6661 gcgccgccgc gaaatcggac cgcatgtaaa acgcgtagca gcgcgcgagg tgaacgaagc
     6721 cgagcgcgta cggatc
//
LOCUS       DATIML010000062         3535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4053898, whole genome shotgun sequence.
ACCESSION   DATIML010000062 DATIML010000000
VERSION     DATIML010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3535
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4053898"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VLJ38_01030"
     CDS             complement(<1..341)
                     /locus_tag="VLJ38_01030"
                     /inference="COORDINATES: protein motif:HMM:NF017046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HSU38106.1"
                     /translation="MLRETSSSLSSVFAARRRRLADKLGGPALIISGLARPRNYRANR
                     YPFRAESHFLYFVGKALEGAALVVRPDGSVLYAEPPDPEEALWTGPQPTLDELATELG
                     LEVRPIDELRV"
     gene            547..873
                     /locus_tag="VLJ38_01035"
     CDS             547..873
                     /locus_tag="VLJ38_01035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38107.1"
                     /translation="MAFNLSKTLSTAAATGLLLGSITACGGSKPPAESPAPAADSAAP
                     AAPADSAAPAGATSDSGAAAPEAKACCKAKNDCKGKGGCKTSDNGCSGKNSCKGKGGC
                     NANCPK"
     gene            984..1958
                     /locus_tag="VLJ38_01040"
     CDS             984..1958
                     /locus_tag="VLJ38_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HSU38108.1"
                     /translation="MNEARRGLPDLGIGIGLRVPHYKRLFAERPPIDFVEIISENFMG
                     VGGKPRHHLERALATYRVVQHGVSLGIGGPDEPDRAFLERLRELVRQTQTPWVSDHFC
                     WCGAGGAHLHDLLPLPFTRNLVQTIADRARKIEDFLGVPFALENASSYLAYRSSVLAE
                     WEFIAEIAERADIGILFDVNNVFVTAYNHGLDPIEFVESVPPERIVQIHLAGHTNLGT
                     HIIDTHDHHVSEPVWDLYRLTLERTGPVSTLVEWDDQIPELEVLFSEVERARVERDRA
                     LAARGSGTSTLDAGAREAVRQAARAWPEAVATRHGWTQGGPREPVTSP"
     gene            1955..2788
                     /locus_tag="VLJ38_01045"
     CDS             1955..2788
                     /locus_tag="VLJ38_01045"
                     /inference="COORDINATES: protein motif:HMM:NF021364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding domain-containing protein"
                     /protein_id="HSU38109.1"
                     /translation="MSDDAALQARMAAFLRRPRDLGTDEEARRFAETQLTGSARLSPV
                     EQLEIYREQFYLRHTASLVEDFPGVGGILGQADWDRLVWDFLATRAPTSFDLAELGAG
                     LADFAATRDWLPARDLVVDMARFEYAHLEVFAAPDSAPLDPAKLGAVPADAWERARLL
                     PDSGLRLLALGYPVAPLRAQLLETREDGSAGPPLPPPKPVFLAVHRRNLGVFHDELEP
                     DAFALLAHVARGEPLGVACDSAAREAGVSMESLGAKLERWFAEWSARGYVVDVVVTAA
                     S"
     gene            complement(2796..>3535)
                     /locus_tag="VLJ38_01050"
     CDS             complement(2796..>3535)
                     /locus_tag="VLJ38_01050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38110.1"
                     /translation="LMPVISDLAAFIRSQQRPDGEFMHFYDRVENHPVDVQVLYYTGE
                     AAFALGRAARLTRDPKDVEAAARALDHLVTYPAWYVGWHYFYGAEHWTCHALDELWER
                     APNRKALRFCLDWQAFVYDTAIRGREASPEYDGATSTGPFVPPAIVGTATRMEAAVAT
                     LRVAKIAGVAASELDGLQAAVDAGLGFLLRTELNPGPAQIMVDPDMMRGGVPNTPVDL
                     TVRIDYPQHAGTGLIGYLKQLERRGPG"
BASE COUNT          597 a         1191 c         1197 g          550 t
ORIGIN      
        1 tcgacgcgga gctcgtcgat gggccgcacc tcgaggccga gctccgtcgc gagctcgtcg
       61 agcgtcggct gcggccccgt ccacagtgct tcttcgggat ccggcggttc ggcatacagc
      121 accgagccgt ccggccgaac gacgagcgcc gcaccctcga gcgccttgcc gacgaagtag
      181 agaaagtgac tttcagcgcg gaaagggtag cgattggcgc gatagtttcg cggacgggcc
      241 agcccggaaa tgatcagcgc ggggccgccc aatttgtcgg ccaagcggcg acgtcgcgcc
      301 gcgaacacgg acgaaagtga cgagctcgtt tcccgcaaca tcaaaatcaa tctcccgagc
      361 gatccagcca gcgcgcggcg acgtaacgct cgaagctggc cgcggcgaca gcgtagcaga
      421 tagactccgc gccgagccgc cccgtaacca gcgggctcgg ccagcgtagg agcggtgcgg
      481 cggcggaaac gccttcgaac cgttcgacga actcagctcg caatagaaac aaaaggacac
      541 tgcatcatgg ctttcaacct ctcgaaaacg ctctcgaccg ctgcggcgac cggccttctg
      601 ctcggctcca tcacggcttg cggtggcagc aagcctcctg ccgaatcgcc tgctccggct
      661 gcggatagtg ccgctccggc ggctcccgcg gattcggctg cgcccgccgg cgccacgtcc
      721 gacagcggcg ccgcagcgcc cgaagccaag gcttgctgca aggccaagaa cgattgcaaa
      781 ggcaagggcg gctgcaagac gagcgacaac ggctgttccg gcaagaacag ctgcaaaggc
      841 aagggcggct gcaacgccaa ctgtccgaag tgagctgacg cgaacggcgg acctgcgcgg
      901 tcgccgttcg tgcgctcgtg cggccgcgac gccccgcagg gggacgccgc ggccgcagcc
      961 gtattggggt aaatgagccg tcgatgaacg aagcgcgccg tggcctgccg gatctcggga
     1021 ttggaatcgg actccgcgtc ccgcattaca agcggctctt cgccgaacgg ccgcccatcg
     1081 acttcgtcga gatcatcagt gaaaacttca tgggcgtcgg gggtaagccg cgccatcacc
     1141 tcgagcgtgc gctcgcaacg tatcgcgtgg tgcagcacgg ggtttcgctc ggcatcggcg
     1201 gaccggacga gccggaccgc gcgtttctcg agcgcttgcg cgagctcgta cggcaaacgc
     1261 agacgccgtg ggtgagcgat catttttgtt ggtgtggcgc ggggggcgcg cacttgcacg
     1321 atctgttgcc gctgccgttc acgcggaacc tcgtgcagac catcgcggac cgcgcgcgca
     1381 aaatcgaaga ttttttgggg gtgccgttcg cgctcgagaa cgcgtcgagc tatctcgcct
     1441 accgctcgag cgtgctcgcg gagtgggagt tcatcgcgga aatcgccgaa cgcgccgaca
     1501 tcggcatctt gttcgacgtg aacaacgtct tcgtcacggc ctacaatcac ggcctcgatc
     1561 ccatcgagtt cgtcgagagc gtgccgcccg agcgcatcgt ccagatccac ctcgccggcc
     1621 atacgaatct cggcacccac atcatcgata cacacgacca ccacgtgagc gaacccgtgt
     1681 gggatctcta ccgcctcacg ctcgagcgca cgggaccggt ctcgacgctc gtcgaatggg
     1741 acgaccagat ccccgagctc gaagtgctct tcagcgaggt cgagcgcgcg cgcgtcgaac
     1801 gtgaccgggc gctcgcagcg cgcgggagcg gcacctcgac gctcgatgcg ggcgcgcgcg
     1861 aggcggtgcg gcaagcggcg cgcgcgtggc ccgaagccgt cgcgactcgt cacggctgga
     1921 cccaaggtgg accgcgcgaa ccggtgacgt ccccgtgagc gacgacgccg cactccaagc
     1981 acgaatggcc gcgtttttgc ggcgcccccg cgacctcggc acggacgaag aggcgcgtcg
     2041 gttcgcggaa acgcagctga ccggcagcgc tcgactttcc cccgtcgagc agctcgagat
     2101 ttaccgcgag caattctatc tccgccacac ggcctcgctc gtcgaggact ttccgggtgt
     2161 gggcgggatc ctgggacaag cagactggga cagactcgtc tgggacttcc tcgcgacccg
     2221 cgcgcccacg agcttcgacc tcgccgagct cggcgcgggg ctcgccgatt tcgcggcgac
     2281 gcgcgactgg ctccccgcac gcgacctcgt agtcgacatg gcgcgcttcg aatacgcgca
     2341 cctcgaggtc ttcgccgcgc ccgactcggc accgctcgat ccggccaagc ttggcgccgt
     2401 cccggcagac gcgtgggagc gagcgcggct gctgccggac agcgggcttc gcttgctcgc
     2461 gctcggctat ccggtggccc cgctccgcgc ccagctgctc gaaacgcggg aagacggctc
     2521 ggctggccct ccgctgccgc cgccgaagcc cgtatttttg gccgtgcacc gcagaaatct
     2581 cggagttttt cacgacgagc tcgagccgga tgccttcgcg ctcttggccc acgtcgcacg
     2641 cggtgagccg ctcggcgtgg cgtgcgacag cgcggcccgc gaggcgggag tgagcatgga
     2701 gtcgctcggc gcaaagctcg agcgctggtt cgcggaatgg tcggcgcgcg gttacgtggt
     2761 ggacgtcgtg gtcactgcgg cgagttgagc aaccgtcagc cgggaccccg ccgctcgagc
     2821 tgcttcaggt aaccgatgag gccggtgccg gcgtgctgcg ggtagtcgat gcgcacggtt
     2881 agatcgacgg gcgtattggg aaccccgccg cgcatcatgt cgggatcgac catgatctgc
     2941 gcggggccgg ggttgagctc ggtgcggagc agaaatccga gccccgcgtc gacggcggct
     3001 tggaggccgt cgagctcgga cgctgctacc cctgcgattt ttgcaactcg cagcgttgcg
     3061 acagcagcct ccatgcgcgt ggccgtgccg acgatcgcag gcggcacgaa gggccccgtg
     3121 ctcgtggcac cgtcgtattc gggcgaggcc tcgcgtcccc gaatcgccgt gtcgtagacg
     3181 aaggcctgcc aatcgagaca gaaccggagc gccttgcgat tgggcgcgcg ttcccaaagc
     3241 tcgtcgaggg cgtggcacgt ccaatgttcg gcgccgtaaa agtagtgcca gccgacgtac
     3301 cacgcggggt acgtcacgag gtgatcgagc gcgcgcgccg ccgcctcgac gtccttcgga
     3361 tcgcgcgtga gccgcgcggc gcgcccgagc gcgaacgcgg cttcgcccgt gtaatagagc
     3421 acctgcacgt cgaccgggtg gttctcgacc cggtcgtaaa aatgcatgaa ttcgccgtcg
     3481 gggcgctgct ggctgcgaat gaacgccgcg aggtccgaaa tgacgggcat gagct
//
LOCUS       DATIML010000063         3822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_12351, whole genome shotgun sequence.
ACCESSION   DATIML010000063 DATIML010000000
VERSION     DATIML010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3822
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12351"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /locus_tag="VLJ38_01055"
     CDS             complement(<1..839)
                     /locus_tag="VLJ38_01055"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HSU38111.1"
                     /translation="MARDHITARGGPSIDMPLLLAIMAIITLGLVNLYSATSVYADDA
                     QRATLADIYVSQIYWIVVGTLLAILVASIDYRSLDRLAMVAYFGGLVALGLVFVVSRS
                     IRGASRWIAIGAFNFQPSEFMKIVLILVLARYLHNDSKVEPRTLVDLVRPALITAVPV
                     VFVMAQPDLGTALIYMLTAGSMIAMTRIRTRSVLTLVGMAGVSLPLAWNFVLLRYQKD
                     RITSFLNPENDTTGSGWHAFQSQTAIGNGQLFGEGFMQGTQNQFRLLPDQFSDFPFAV
                     FCE"
     gene            complement(839..2782)
                     /gene="mrdA"
                     /locus_tag="VLJ38_01060"
     CDS             complement(839..2782)
                     /gene="mrdA"
                     /locus_tag="VLJ38_01060"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HSU38112.1"
                     /translation="MRLFVQRSDVGEFRRRYRWMVLVVVGVFITLIGRLVLLQLLEGD
                     VHRAQARRNIVREGFLATTRGVIRDSLGRVLAANRPAYNVYVTPSRLEMEKGWPLLAR
                     LMHLDDAEKAALEQKIKERRGLDAKDRRRQQQILVKVDIDRDAVAYLETHERELDGVE
                     VAPSPVRYYPYGALGAHVIGSMREVNRDELAWLGDRGYRAGDRTGAIGIERRWESYLR
                     GQRGMRKTVRGAGRRLDPAQLEAKYLEEPRRVEPIPGRDISLTLDIELIESIERAMHG
                     QVAGAAVVVDVRTGRILALLSKPSFDPNVVSGGQGIKAVSEAYTRLYADPLKPTLDKT
                     ISAAYPPGSTYKPFTALAGLAEGLVDPKAEIDCHGGFEYGKRFFRCTGVHRRVNLHSA
                     IVQSCNTYFYELGSRISIDRLASIGLDFGFGVRTGIGVNPEARGRMPTRGWYTRRYKE
                     AFRGGFTVLSAIGQGATTVTVLQLALAYAALANGGTVYQPQVVRSIETSDGTVIQEFP
                     PRVRRMVQLDPAHLGMVKNAMQGVTSEKHGTGYGGRIPGVDLAGKTGTAQVSHVTPRS
                     VDPQREWYFNRDHAWFAGYSPAASPEIAIVVLIEHGGGGGKNAVPVAMRVVRDWEKMK
                     EDRLAARGTASATTPTGSGKGSL"
     gene            complement(2788..3324)
                     /gene="mreD"
                     /locus_tag="VLJ38_01065"
     CDS             complement(2788..3324)
                     /gene="mreD"
                     /locus_tag="VLJ38_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HSU38113.1"
                     /translation="MRSTAYFGVAVLLLLVQSNLFRLLGPLGALVGARWVHGVTPSLV
                     LPLVIFLGVHEPSTGRGALLAFGIGYAEDLMSGAPVGLFTFISVAIWWLARVAGVRLT
                     AQTALPRMSLALAFSLVEGAMVLILLAVFGGDNRRPVEVASIVLPRSLATALFSPPVF
                     RIAQRLRSGMTQARPAEG"
     gene            complement(3327..>3822)
                     /gene="mreC"
                     /locus_tag="VLJ38_01070"
     CDS             complement(3327..>3822)
                     /gene="mreC"
                     /locus_tag="VLJ38_01070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HSU38114.1"
                     /translation="EYFRVWHLTIDSPHAEIRPNMPVISLDGAVGTVLRVAGHDADVE
                     LTVESGFGVDVVVERTGARGFVRGSGDRSKYAVRVEYVPRTDLVEVGDLLVTSGVGCR
                     FPKGVPVARVSKVLRRDYGIYQTVEAEPSVDFSRLEEVLVVLTDTSECDQREPQGRRP
                     RAQR"
BASE COUNT          672 a         1245 c         1310 g          595 t
ORIGIN      
        1 tcttcgcaaa acacggcgaa cggaaagtcc gagaactggt cgggcaagag ccgaaactgg
       61 ttctgcgtgc cctgcatgaa cccttcgccg aagagctggc cgttgccgat ggccgtttgg
      121 gactggaagg cgtgccagcc ggagccggtc gtgtcgtttt cggggttcaa aaagctcgtg
      181 atgcggtcct tctggtaccg gagcagcacg aaattccagg cgagtgggag cgagacaccc
      241 gccatcccga ccaacgtgag gacgctgcgg gtgcggatgc gcgtcatcgc gatcatcgag
      301 ccggccgtga gcatgtagat gagcgccgtg ccgaggtccg gctgggccat cacgaagacg
      361 acgggcacgg ccgtgatgag cgctggacga acgagatcca cgagcgtgcg cggttcgacc
      421 ttggagtcgt tgtgcaggta gcgcgcgagc acgaggatca gcacgatctt catgaactcg
      481 ctcggctgga aattgaacgc accgatcgcg atccagcgcg acgcgccgcg gatgctgcgc
      541 gagacgacga acacgagacc tagcgcgacc aggcccccga agtacgcgac catcgcgagc
      601 cgatcgaggc tgcgataatc gatcgaggcg acgagaatgg cgagcagcgt accgacgaca
      661 atccagtaga tttgcgaaac gtagatgtcg gcgagcgtcg cgcgctgggc gtcgtcggcg
      721 tagacgctcg tcgcgctgta cagattgacg aggccgagcg tgatgatcgc catgatggcg
      781 agcaagagcg gcatgtcgat gctcggcccg ccgcgcgccg tgatgtgatc gcgtgccatc
      841 agaggctacc tttgcccgag ccggtgggcg tggtggccga cgccgtaccg cgcgccgcga
      901 gccgatcttc cttcatcttt tcccagtcgc gcaccacgcg catggcgacc ggcacggcgt
      961 tcttgccgcc gcctccgccg tgctcgatga ggacgacgat ggcgatttcg ggcgaggccg
     1021 ccggcgagta gccagcgaac cacgcgtggt cacggttgaa gtaccactcg cgttgcgggt
     1081 cgacgctgcg cggagtgacg tggctcacct gcgcggtacc ggtcttgccg gcgagatcga
     1141 cgcccgggat gcgcccgccg taacccgtac cgtgtttctc gctcgtcacc ccctgcatgg
     1201 cgttcttcac catgccgagg tgtgccggat cgagctgaac catgcgccgg acgcgcggcg
     1261 gaaattcttg aatcaccgtg ccgtcgctcg tctcgatgct gcgcacgact tgcggctggt
     1321 acacggtgcc gccgttggcg agcgcggcgt acgcgagcgc gagctgcagc accgtcactg
     1381 tggtcgcgcc ctgaccgatc gcggagagca cggtgaagcc gccacggaag gcctccttgt
     1441 aacggcgcgt gtaccagccg cgcgtcggca tgcggccgcg cgcctcgggg ttcacgccga
     1501 tgccggtgcg aacaccgaag ccgaaatcga ggccaatgga ggccaatcga tcgatgctga
     1561 tgcgcgagcc gagctcgtag aaatacgtgt tgcacgactg gacgatcgcg ctgtgcaggt
     1621 tcacgcgccg atgcacgccc gtacagcgga agaaacgttt gccgtattcg aagccgccat
     1681 ggcaatcgat ttcggccttg ggatcgacca ggccctcggc gagaccggcg agcgcggtga
     1741 acggcttgta ggtcgagccc ggcggatacg ccgcggagat ggtcttgtcg agcgtcggtt
     1801 tcagcgggtc ggcgtacagc cgcgtgtacg cctcgctcac ggccttgatg ccctgcccgc
     1861 ccgacacgac gttcgggtcg aagctcggct tcgacagcag cgcgaggatg cggcccgtgc
     1921 ggacgtcgac gacgacggcg gcccccgcga cctgcccgtg catggcgcgt tcgatcgatt
     1981 cgatgagctc gatgtcgagc gtgagcgaga tgtcccggcc tgggatcggc tcgacgcgcc
     2041 gcggctcttc gaggtacttg gcttcgagct gcgcggggtc gagccgccgt cccgcgccgc
     2101 gcacggtctt gcgcatgccg cgctggccgc gcaaatagct ttcccagcgc cgctcgatgc
     2161 cgatggcgcc cgtgcgatcg ccggcgcgat agccgcggtc gccgagccaa gcgagctcgt
     2221 cacggttcac ctcgcgcatg gaaccgatca cgtgcgcccc gagcgcgccg tacgggtagt
     2281 agcgcacggg agacggtgcg acctcgacgc cgtcgagctc tctttcgtgg gtctcgaggt
     2341 aggcgacggc gtcgcgatcg atgtctacct tgacgaggat ttgctgttgg cggcggcgat
     2401 ccttggcgtc gagcccgcgc cgttccttga ttttttgctc gagcgccgcc ttttcggcgt
     2461 cgtccaagtg catcaggcgc gcgaggagcg gccacccttt ttccatctcg aggcgcgagg
     2521 gcgtgacgta gacgttgtag gccgggcggt tcgcggcgag cacgcggccg agcgaatcgc
     2581 gaatcacccc acgcgtcgtc gcgagaaaac cctcgcgcac gatgttgcgg cgcgcctgtg
     2641 cgcgatgcac gtcaccctcg aggagctgga gcagcacgag ccggccgatc agcgtgatga
     2701 acacccccac gacgaccagc accatccagc gatagcgccg gcgaaactct ccgacatcgg
     2761 agcgctggac gaagagtctc acgacactta gccctccgct gggcgcgctt gggtcatgcc
     2821 cgaacgtaag cgttgcgcga ttcgaaacac gggcggcgag aacagcgccg tcgcgagcga
     2881 gcgcggcagc acgatgctcg cgacctcgac ggggcgtcga ttgtcgccgc cgaagacggc
     2941 cagcaaaatc agcaccatcg cgccttcgac cagcgagaag gcgagagcga gcgacatgcg
     3001 cggcagcgcg gtctgcgccg tgagtcgtac gcccgcgacg cgcgcgagcc accaaatggc
     3061 gacggagatg aaggtgaaca ggcccacggg cgctccgctc atgaggtcct cggcgtagcc
     3121 gatgccgaac gcgaggagcg cgccgcgccc cgtcgagggc tcgtgcacgc cgagaaaaat
     3181 gacgagcggc agcacgaggc tcggcgtcac gccatgaacc cagcgcgccc ccacgagcgc
     3241 gccgagcgga cctagcagcc gaaacagatt gctctgcacg agcaagagca gcaccgcgac
     3301 gccgaagtaa gccgtgctgc gcatgactag cgctgggcgc ggggcctgcg cccctgcggt
     3361 tcgcgttgat cgcactcgct cgtgtcggtc aagacgacga gcacttcctc gagacgcgaa
     3421 aaatcgaccg agggttcggc ctcgaccgtt tgatagatgc cgtagtcgcg gcgcagcacc
     3481 ttgctcacgc gcgcgacggg gacgcctttc gggaaacgac agcccacgcc gctcgtcacg
     3541 agcaagtcgc cgacttcgac gaggtcggtg cgcgggacgt actcgacccg tacggcgtac
     3601 ttcgagcgat cgcccgagcc gcgtacgaaa ccacgcgcgc ccgtgcgctc gacgacaacg
     3661 tcgacgccga agccgctttc cacggtgagc tcgacgtcgg cgtcgtgccc ggcgacgcga
     3721 agcacggtgc cgacggcgcc gtcgagcgag ataacgggca tgttcggccg gatttccgcg
     3781 tgcggcgagt cgatcgtcag gtgccagacc ctgaagtact cc
//
LOCUS       DATIML010000064         3820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_12418, whole genome shotgun sequence.
ACCESSION   DATIML010000064 DATIML010000000
VERSION     DATIML010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3820
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12418"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..366)
                     /locus_tag="VLJ38_01075"
     CDS             complement(31..366)
                     /locus_tag="VLJ38_01075"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HSU38115.1"
                     /translation="MPPRVQHLSELELAQVADIEHVGGERSFRRRLMELGLVPGTRVE
                     VKAVAPLGDPLELLVRGASLSIRRADAALVRVVPAAPSPAKATTPSSVKSAEPARGAL
                     KATPVRGAP"
     gene            complement(470..1435)
                     /locus_tag="VLJ38_01080"
     CDS             complement(470..1435)
                     /locus_tag="VLJ38_01080"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38116.1"
                     /translation="MNPPEDTPGRLLAGRYDLIEELGRGGMAVVWRAAQRGPGRFTRA
                     VAVKRVLPELRNAPDIAAMFAEEARIGAELNHPNVVGVLDYGLDEFQEPYLVSEFVNG
                     LDLGAWIRSHTNRGLETPWEIVAAIGIEMLRGLASAHGRVDARGRPSSVLHRDVTPGN
                     ILLDVSGVVKLGDFGLAKATDRERLTRPDVVKGKAAYLAPELVRGEAASPQSDLFGVG
                     IVLWEALTGARLFLGENEIASALLVRDARVPLLGMKRPGLPLQLAQAVHRALERDPAR
                     RFGSAEEMLDALRRVLRVLPTSVDAFALAPSFAAALANRASLGRT"
     gene            1567..2709
                     /locus_tag="VLJ38_01085"
     CDS             1567..2709
                     /locus_tag="VLJ38_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_function: GO:0120153 - calcium-dependent carbohydrate
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lectin domain-containing protein"
                     /protein_id="HSU38117.1"
                     /translation="MLPRLGTLAGHRSSWATVAVLGIVVACSGKDKSFFDAPPIAHTT
                     GGKAGATSGKAGRAGIGGGAGTALGKGGGATSGETGGAMDGMAGAGEGGMPATGGSGG
                     SGAHGGSMAGGSTATGGSGGAGLGGTTTIGGSGGAGAGGTAGNGGSGTAGLGASAGTG
                     GLGGSSGLGGTGATAGLGGAGASAGMGGASTCVPTVPSTEICDGIDNDCHGGIDGPGV
                     CPDGCFGAIYDDHRYLLCIGVGNYTYTRTEAHDACVSHGDHLDTTLDLVRVNSAEENA
                     FVLGFIADHDVSDPVWNGASDSSMSSVGSSEGTWVWGSSDNGATFYRDDSPVSDRYND
                     WAPGQPDNDGSGTGEDCAVFDPAKNWHWDDVSCSDETSTFVCEEPH"
     gene            2756..3232
                     /locus_tag="VLJ38_01090"
     CDS             2756..3232
                     /locus_tag="VLJ38_01090"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSU38118.1"
                     /translation="MVTRTHKQSAGILVYRRGARGLEFMLAHPGGPVFRRRDAGAWTI
                     PKGEIEAGEDALAAAQRELLEETGFSLAGPFLPLGSVKQKNGKTVHAWACEASVDTEA
                     LRSNQFSMQWPPRSGRFAEFPELDRAAYFDFETAREKLNAAQFELVVRLVALLEQG"
     gene            complement(3229..3654)
                     /locus_tag="VLJ38_01095"
     CDS             complement(3229..3654)
                     /locus_tag="VLJ38_01095"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HSU38119.1"
                     /translation="MQPHEPENVRLIRRYFAELWNEGRVELIPELLAENYVNHSPGTP
                     DMPRDRSGVAGIVRALRTAFPDLDYRIEGIVADDRAVAVRLSVSGTHAGDFFGVPPSG
                     KSFRVAQINVEHVEGGKIVAHYRTTDELSLLRQLGALPA"
     gene            3727..>3820
                     /locus_tag="VLJ38_01100"
     CDS             3727..>3820
                     /locus_tag="VLJ38_01100"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSU38120.1"
                     /translation="MEHRLLASFVVLAEELHFGRAARRLHISQPP"
BASE COUNT          619 a         1253 c         1362 g          586 t
ORIGIN      
        1 gctccacgag ggacgcgccc tcgccgacgg tcacggcgcg cctcggaccg gagtcgcctt
       61 gagcgcgcca cgcgccggct cggcgctctt cacggacgac ggcgtcgtgg ctttggcggg
      121 tgacggcgcc gcgggcacga cgcgtacgag cgcggcgtcg gcgcgccgga tggaaagact
      181 tgcgccgcgc acgaggagct cgagcggatc gccgagcggc gccaccgcct tgacctccac
      241 gcgcgtgccc ggcaccaagc cgagctccat caggcgccgg cggaaagagc gctcgccacc
      301 tacgtgttcg atgtccgcta cttgagcgag ctcgagctcg gagaggtgct ggacgcgcgg
      361 cggcatgacg acgacgacag actagcctac ctgaaaacga ctatcaaatt cagccggctc
      421 gggcgcaggc gcagcggtga tctggcccgc ccagaccccg acgttgatgc tacgtgcggc
      481 cgaggcttgc ccgattggcg agcgcggccg caaagctcgg cgcgagggcg aaggcgtcga
      541 ccgaggtcgg cagcacccgc aggacccgcc ggagcgcgtc gagcatctct tccgcgctcc
      601 cgaagcggcg cgcgggatcg cgttcgagcg cgcggtggac cgcttgcgcg agctggagcg
      661 gcaagccggg tcgcttcatg ccgagcagcg gcacgcgcgc gtcgcgcacg agcagcgccg
      721 aagcgatctc gttttcgccg aggaacagcc gggcgccggt cagcgcttcc cagagcacga
      781 tgcccacccc gaacagatcg ctctgcggac tcgccgcttc gccgcgcacg agctcgggcg
      841 caaggtaggc ggctttgccc ttgacgacgt cgggccgcgt gagccgctcg cgatcggtcg
      901 ccttggcgag cccgaaatcg ccgagcttca cgacgcccga cacgtcgagc aggatgttgc
      961 cgggcgtcac gtcgcgatgc aaaacggagg acggccgtcc gcgggcgtcg acgcgaccgt
     1021 gcgccgacgc gagcccgcgc agcatctcga ttccgatcgc cgccacgatt tcccacggcg
     1081 tttcgagacc gcggttcgtg tgcgagcgga tccacgcgcc gagatcgagc ccgttgacga
     1141 actcgctcac gaggtacggc tcctgaaact cgtcgagccc gtaatcgagc acgccgacca
     1201 cgttcggatg gttgagctcg gcgccgatcc gcgcctcctc cgcgaacatc gccgcgatgt
     1261 ccggcgcgtt cctgagctcc ggcagcacgc gcttgactgc gaccgcgcgc gtgaagcgtc
     1321 caggaccgcg ttgcgcggcg cgccagacga cggccatacc gccgcgcccg agttcttcaa
     1381 tgaggtcgta gcggcccgca aggaggcggc ccggcgtgtc ttcaggcgga ttcacgatgg
     1441 aaacgcttat ccgagcggta cttctggctg tcaaatcggt atggaggtcg gagccgctgc
     1501 tgtcgggcgc gccgcgagcg acgctgctca gttgaaagtc gtgtcacgag tcgtcatcat
     1561 cgaacgatgc ttcctcgttt gggcacgctc gccgggcacc gctcgtcgtg ggcaacggtg
     1621 gccgtgctcg gcatcgtggt cgcatgctcg ggcaaggaca aatccttttt cgacgcgcct
     1681 ccgatcgcgc acacgaccgg cggcaaagca ggcgccacga gcggcaaggc gggtcgcgcc
     1741 ggaatcggtg gcggcgcagg aaccgcgctg ggcaaagggg gcggtgcgac gagcggcgag
     1801 acgggcggcg ctatggacgg catggcgggt gctggcgaag ggggcatgcc ggcgacgggc
     1861 ggctcgggcg gcagcggtgc tcacggcggc tcgatggcag gcgggtcaac cgcaacgggt
     1921 ggtagcggcg gtgccggctt gggcggcacg accacgattg gcggcagcgg cggcgccgga
     1981 gccggcggta cggcgggcaa cggcgggagc ggcacggccg gcttgggcgc gtcggcggga
     2041 accggcggcc ttgggggaag cagcggactc ggcggcacgg gcgcaacagc agggctcggc
     2101 ggcgctggcg cgagtgccgg tatgggtggc gcgtcgacct gcgtaccgac ggtgccatcc
     2161 accgaaatct gtgacggtat cgacaacgac tgccacggcg gcatcgacgg ccccggcgtc
     2221 tgtcccgatg gctgcttcgg cgcgatctac gacgatcacc ggtatctttt gtgcatcggc
     2281 gtcggcaact acacgtacac gcggaccgaa gcgcacgacg cgtgcgtgag ccacggcgat
     2341 cacctggaca cgacgctcga cctcgtgcgc gtcaattcgg cggaggagaa cgcgttcgtg
     2401 ctcgggttca ttgccgacca cgacgtgagc gatccggtgt ggaacggtgc gagcgacagc
     2461 tcgatgtcta gtgtcggctc gagtgagggc acttgggtgt ggggctcgag cgacaacggc
     2521 gccacgtttt atcgcgacga ctcgcccgtc tcggaccgtt acaacgactg ggcgccgggc
     2581 cagcccgaca acgacgggtc gggcacgggc gaggactgtg ccgtcttcga tcctgcgaag
     2641 aattggcact gggacgacgt gtcgtgcagc gacgaaacct cgaccttcgt ctgcgaggag
     2701 ccgcactagg tttaccgctg ggcgcgcgcg gttcggggcg ctatttcctc ttccggtggt
     2761 cacccgcacg cacaagcaga gcgccggcat cctcgtttat cgccgcggcg cgcgcggcct
     2821 cgagttcatg ctcgcgcacc ccggcgggcc cgtgttccgg cggcgcgacg cgggcgcgtg
     2881 gacgattccc aaaggtgaaa tcgaagcggg tgaagatgcg ctcgccgcgg cgcagcgcga
     2941 gctactcgaa gaaacgggct tctcgctcgc gggcccgttc ttgccgctcg gctcggtcaa
     3001 acagaagaac ggcaagaccg tgcacgcatg ggcgtgtgaa gcgtccgtcg ataccgaggc
     3061 gctccgcagc aaccaattca gcatgcagtg gccgccccgc agcggccgct tcgccgagtt
     3121 ccccgagctc gatcgtgcgg cctacttcga tttcgaaacc gcgcgcgaga agctcaatgc
     3181 cgcgcaattc gagctcgtcg tgcggctcgt cgcgctgctc gaacaaggct aggccgggag
     3241 cgcgccgagc tgccgcagca gcgaaagctc gtcggtcgtc cggtagtgcg cgacgatctt
     3301 gccgccttcg acgtgctcga cgttgatttg cgcgacgcgg aatgacttgc cggagggtgg
     3361 gacaccgaag aagtcaccgg cgtgcgtccc gctgacgctc aggcgcaccg cgacggcacg
     3421 gtcgtcggcg acgattcctt cgatgcgata gtcgaggtct gggaaagccg tacgcagcgc
     3481 gcgcacgatg cccgcgacgc cgctgcgatc acgcggcatg tcgggagttc cgggcgagtg
     3541 gttcacgtag ttctcggcga ggagctccgg gatgagctcg acgcggccct cgttccagag
     3601 ctccgcgaag taacgacgaa tcaggcgaac gttttcgggt tcgtgcggtt gcatgtcgtg
     3661 ttcatgcagt ccgagcgaca gcgcgtccaa tatattattt ccaacaaatg atatgatacg
     3721 catatcatgg aacaccggtt gctcgcgtct ttcgtggtgc tggccgagga acttcacttc
     3781 ggtcgggccg cgcggcggct ccacatttcg cagccgcccc
//
LOCUS       DATIML010000065         3904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3189026, whole genome shotgun sequence.
ACCESSION   DATIML010000065 DATIML010000000
VERSION     DATIML010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3904
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3189026"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1266
                     /locus_tag="VLJ38_01105"
     CDS             <1..1266
                     /locus_tag="VLJ38_01105"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU38121.1"
                     /translation="GGTPGLGASDAGTGGSGNAPSGGAPATASGGNGTRSNAGTTTAS
                     DGGAGGTTGEASAGVAAAAAGHDSGVAGANVSRAGESGASSSAGQGGNGGAMTAVSAG
                     NAAGSNAGATHASGGAQGGPYPDLRFAGLVTALELAPLRLATNGPYPGKVTITSGGVD
                     ALCGSSPTADIATNAETQFLRASGGSGCDKLRIVFTLCEGLYRIVAKKSAGITSLADL
                     AGKRVMAPSGASSAYYLTRMLSAAGLSAGSGAGQVNVLSGNPNGSTFMGSSAPDAATI
                     WEPGIEQAAEALGTDAVVLQHDASDQEVYRELFNLHTTTDVLADPAKRRGVVELVRDL
                     IAASTALRADPTAANALLTGPAGVSASVLTASMKYERFAGTLAPDLLDVMAEEEPWRA
                     SIDNRSARSRDELSKYIDTSVLADALSGM"
     gene            complement(1316..3055)
                     /locus_tag="VLJ38_01110"
     CDS             complement(1316..3055)
                     /locus_tag="VLJ38_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38122.1"
                     /translation="MRESTAFRGKASALAGQVRPRARVCRLSVAACGVLLGACSPDDV
                     KSASPEHSSSGSSAVGSAGSSNGFAGSGGQSAGVSGAPAQSASGAGAPSGGQTSGSSG
                     GPSSLGAAGSPNAAGGVSYGSGGVASSPFAGAAGSSGASGAAGASAAHTVDHCIYGFD
                     PEPSDETMAHGPAEFLPPGVSDRNQVDLILQPEILDWFHAHNWEDVHVEWHAIRTCNT
                     SAKGTGTLINICQYKQLIPSDQNCQTGGDGYQFLLAHRHMITILKELWPKHADDFKGF
                     DHFPESADDVPEQWKSAWKPWSSTTLQNGLVGDNIDKPENLAKFPDEGSLGFWLQCLA
                     GQALPNRSDAIASGGIHFDLHGQWVRTSNTTHALNNGNANVDNYMFYKIHGWIDGVWA
                     KYRKAKGLSDDDPKFKADLLAQCREMDTEMQLSIQALGPQGGTGTDPDDTPLPVESGY
                     FHEQVRPIFENANNKCSGCHSETGPSAGMSLGGHISSAEIVKGLVNQPAIDGGQFLLV
                     VPGDPDHSWIYLKAAGLAPNAGCTATNGGLCITAVMPPNGSGATTVTSDQLAIIRQWI
                     LDGAQGPPTSAGL"
     gene            complement(3204..3788)
                     /gene="def"
                     /locus_tag="VLJ38_01115"
     CDS             complement(3204..3788)
                     /gene="def"
                     /locus_tag="VLJ38_01115"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HSU38123.1"
                     /translation="MTLRRIAQLGEPILRQRARELSLEELRSEPLQRLIDDMIETMHD
                     ADGAGIAAPQVYASLQLTVIEVRDNPRYPKVEPIPLTVLVNPVVTPDVPSLPGELADT
                     DAFSVYEGCLSVPGVRGRVRRPRRVHVRAWDRAGAPLEFVWEGFRAVVVQHETDHLWG
                     TLFVDRADPRTLTFLREYERYVPPDVRLVDGAPE"
BASE COUNT          620 a         1324 c         1335 g          625 t
ORIGIN      
        1 gggggcacgc cgggcctggg cgcgagcgac gccggaacgg gcggctccgg caacgcgccg
       61 agcggaggcg cgcccgctac ggccagcggc ggcaacggca cgcgctcgaa cgccggcacg
      121 acgacggcga gcgacggcgg agctggcggg acgaccggcg aagcttcagc gggtgttgcg
      181 gccgcggcgg ctggtcacga cagcggcgtc gccggcgcga acgtcagtcg tgctggcgaa
      241 agtggcgcct cctccagcgc gggccaaggc ggcaacggcg gcgcgatgac cgcggtctcg
      301 gccggcaacg cggccggaag caacgccggc gcgacccacg ccagcggagg cgcacagggc
      361 ggtccctacc ccgacctccg attcgcgggc ctcgtcaccg cactcgagct cgctccgctc
      421 aggctcgcga cgaacggccc gtatcccggc aaggtgacga tcacgagcgg tggcgtcgac
      481 gctttgtgcg gctcgagccc gacggcggac atcgccacca acgccgaaac tcagtttttg
      541 cgcgcgagcg gcggcagcgg ctgcgacaag cttcgcatcg tgttcacgct ctgcgagggg
      601 ctctaccgca tcgtggccaa gaagtcggcg ggcatcacgt cactggcgga tctcgcgggc
      661 aagcgcgtga tggcgccgtc gggcgcgtcc tcggcgtact atctcacgcg catgttgagc
      721 gcggcgggcc tcagcgccgg gagcggcgcc gggcaggtca acgtcctgag cggcaacccg
      781 aacggcagca cgttcatggg ttcgagcgca cccgacgctg ccacgatttg ggaacccggc
      841 atcgaacaag ccgcggaggc gctcggaacg gacgccgtgg tgctgcagca cgacgcgagc
      901 gatcaggaag tttaccgcga gctcttcaac ctgcacacga cgaccgacgt gctcgccgac
      961 ccggcgaaac gtcgcggcgt ggtcgagctc gtgcgcgacc tcatcgccgc atcgacggcg
     1021 ctccgagcgg atccgacagc cgccaatgcg ctgctcacgg gacccgccgg cgtgagcgcg
     1081 agcgtgctca ccgcgtccat gaagtacgag cgcttcgccg gcaccctcgc gcccgatttg
     1141 ctcgacgtga tggcggagga agagccttgg cgcgcgagca tcgacaaccg ctccgcgcgt
     1201 tcgcgcgacg agctttcgaa gtacatcgac acgagcgtgc tcgccgacgc cctgtccggc
     1261 atgtgagcga ggtcccgctc ccgggcagcc gagccgccgc acgcccgcgc cgcgactaca
     1321 ggcccgcgga agtgggcggc ccctgcgctc cgtccaagat ccattgacgg atgatcgcga
     1381 gttggtcgga cgtgacggtg gtcgcgcccg agccgttcgg cggcatcacg gccgtgatgc
     1441 acaatccgcc gttcgtggcc gtgcaaccgg cgttcggcgc gagaccagcc gccttcaggt
     1501 agatccagct gtgatcgggg tcgccgggca cgaccagcag gaactgcccg ccgtcgatgg
     1561 cgggttgatt cacgaggcct ttgacgatct cggccgagct gatgtgtccg ccgagcgaca
     1621 taccggcgct cgggcccgtc tcggaatgac agccgctgca cttgttgttc gcgttctcga
     1681 agatgggccg gacttgctcg tggaagtacc cgctctctac cggcaagggc gtgtcgtccg
     1741 gatccgtgcc tgtgccgcct tgcgggccca gcgcttggat actgagctgc atctcggtgt
     1801 ccatctcgcg gcattgcgcg agcagatccg ccttgaattt gggatcgtcg tcggagagac
     1861 ccttggcttt gcggtacttc gcccacacgc cgtcgatcca gccgtggatc ttgtagaaca
     1921 tgtagttatc gacgttcgcg ttgccgttgt tcagcgcgtg ggtcgtgttg ctcgtgcgca
     1981 cccactggcc gtggaggtcg aagtggatgc cacccgaggc gatcgcgtcg gatcgattcg
     2041 gcagcgcctg accggcgagg cactggagcc aaaagccgag tgagccttcg tccgggaact
     2101 tggcgaggtt ctcgggcttg tcgatgttat cgccgacaag accgttttga agcgtggtcg
     2161 agctccacgg cttccacgcc gatttccact gctccggcac gtcgtccgcg gactcgggga
     2221 aatggtcgaa gcctttgaag tcgtccgcat gtttcggcca gagctccttc aggatcgtga
     2281 tcatgtgccg gtgcgcgagc aggaactgat agccgtcgcc gcccgtttgg cagttttgat
     2341 ccgagggaat caactgcttg tactggcaaa tgttaatcag cgtgccggtg cctttggccg
     2401 acgtgttgca cgtgcggatg gcgtgccact cgacgtgcac gtcttcccag ttgtgggcgt
     2461 ggaaccagtc gaggatttcg ggctggagaa tgagatcgac ttggttccga tcgctgacgc
     2521 cggggggtag aaattcggcg ggcccgtgcg ccatcgtctc gtccgacggc tcggggtcga
     2581 agccgtaaat gcagtgatcg acggtgtggg ccgcgctcgc gccggcggca ccgctcgctc
     2641 cgctcgatcc ggcggcgccc gcgaaaggcg agctcgcgac gccgccgctg ccgtaactga
     2701 cgccgccggc agcgttcggc gagcccgctg cgccgaggga cgacgggccg ccgctgcttc
     2761 cgctcgtctg tccgccactc ggcgcgcccg cgccgctcgc ggactgcgcc ggcgcgccgc
     2821 tcacgcccgc actttgcccg ccgctgccgg cgaatccatt cgacgacccg gcgctgccaa
     2881 cggcgctgga gccactgctc gagtgctcgg gggacgccga cttcacgtcg tccggcgaac
     2941 aggcgccgag caacacgcca caagccgcta cgctcaggcg gcagacgcgc gcgcggggcc
     3001 gcacctgccc tgcaagcgcc gaggctttgc cgcgaaaagc cgtgctctct cgcatgtcct
     3061 cactctacac gttaaaagac caacgtcccg caaaatggat tgcaccgatt gcgatggcta
     3121 tggtgagaac gcgaatcgcg agcgccgggg tgagcttttt cgcattggca gctgcgcctc
     3181 gacggcgcgg cgcgcgagct cttctactcc ggagcgccgt cgacgagtcg cacgtcgggc
     3241 ggcacataac gctcgtactc gcgcaagaag gtcagcgtgc gcgggtcggc gcgatcgacg
     3301 aagagggtgc cccacagatg atcggtttcg tgctgcacga cgaccgcgcg aaagccctcc
     3361 cacacgaact cgagcggcgc gcccgcgcga tcccaggctc tcacgtgcac gcgccgcgga
     3421 cggcgcacgc ggccgcgaac acccggcacc gacaagcaac cttcgtaaac gctgaacgca
     3481 tcggtgtcag cgagctcccc cggcaaactc ggcacgtccg gcgtgaccac gggattgacg
     3541 aggaccgtga ggggaatggg ctcgaccttc ggataacggg gattgtcgcg cacctcgatc
     3601 accgtgagct gcagcgaggc gtagacttga ggtgccgcga tgcccgcgcc gtcggcgtcg
     3661 tgcatcgtct cgatcatgtc gtcgatcagc cgctgcaggg gctcgctccg gagctcctcg
     3721 agcgagagct cgcgcgcgcg ttgcctcaaa atcggctccc cgagttgcgc gattcgccgc
     3781 agcgtcatgg cccgaagcct agcgcgcgac gcaacgcccg cacgccgccc gagcgccttt
     3841 ttggccctca gcgagcgtag tgaatcacgt tgatacagcg cgtttcgcgc gtgctgcggt
     3901 tctc
//
LOCUS       DATIML010000066         2738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2033464, whole genome shotgun sequence.
ACCESSION   DATIML010000066 DATIML010000000
VERSION     DATIML010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2738
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2033464"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1465
                     /locus_tag="VLJ38_01120"
     CDS             <1..1465
                     /locus_tag="VLJ38_01120"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU38124.1"
                     /translation="EPPGAGTQPSTVTVSVAHAATRDERPAAAPRTAEPGSIEDNLPF
                     APTGERAASIAWRTWIYTDVGPKRSRYGYLRAGAVVDVRGPPIKNDGCEGGWYRVNPR
                     GFVCLGLGATLDLENPVAVASAKRAVRGDRFPYAYALSADPAPLLYFRLPSAREMRES
                     EQTDVAGRGAILKEKLKNVGVEALFAGGEPPPFLAHGEKLKKPFGVKQPLRFAYHAGN
                     ASVDSGFAISQSFDWEGRRFGLTTELDIIALDRTKPVVPSSFHGIALAEGEDLPVGFS
                     MPRYAQRYALHADGHLYPSATLAYREAVPLTGRKRPGGVLEARDGSFVPESALRVIEP
                     RTTFPSFATGDRKWVDVSIKQQALVAYVGRRPAYVTLVSTGRDGLMDPETTNSTVRGT
                     FMIYQKDVSSTMDGDEDRSDSFNLHDVPFVQYFHKGYALHGTYWHDEFGKVRSHGCVN
                     LAPADAAWLFEWTDPEVPPAWHSVINKDRGTVVYVRP"
     gene            1545..>2738
                     /locus_tag="VLJ38_01125"
     CDS             1545..>2738
                     /locus_tag="VLJ38_01125"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSU38125.1"
                     /translation="MPGPFDLTDLLKRALQVNAKEVRVAPGRRTIVSLPQGDSEVRGD
                     SWTGDGIEQLIAPILTPAVRRMLGLGIAEWDFELEGRGTVRARAEVKAGVPHVTFGLD
                     RAHASTGGAQAEPRMMPAHRAAMPEPRMPDPPLVERGGAMSSGSIPLAEEPRGASISS
                     PRPSFEDASSPTAAIDRLLGVMLERKASDLHVSTTSPPLLRVDGEMLQIAGESAFSNE
                     SMQRMLMPIVPERNREEFERTHDSDFAYELPGRARFRVNVFVDLRGMGAVFRVIPSKI
                     LTVDDLGLPKDLLTLCHLPKGLVLVTGPTGSGKSTTLAALIDYINRTRSAHVITIEDP
                     IEFVHPNKKCLINQRQVGEHTDSFKRALRAALREDPDIVLLGEMRDLETVSIAIETAE
                     TGHLVF"
BASE COUNT          481 a          952 c          886 g          419 t
ORIGIN      
        1 ggagccgccc ggcgccggaa cacagccgag cacggtaacc gtcagcgtcg cccacgcggc
       61 gacgcgggac gagcgccccg cagcggcgcc acgtaccgcc gagccggggt ccatcgagga
      121 taaccttccg tttgccccga cgggcgagcg cgcggcgagc atcgcgtggc gcacgtggat
      181 ttacacggac gtagggccca agcgctcgcg ctacggctac ctgcgcgccg gcgccgtcgt
      241 cgacgtgcgc gggccgccca tcaagaacga cggctgcgaa ggcggctggt accgcgtcaa
      301 tcctcgtggc ttcgtctgtc tcggcctcgg cgccacgctc gacctcgaaa atcccgtcgc
      361 ggtcgcttcg gccaagcgcg ccgtgcgcgg cgatcgcttc ccgtacgcct acgcgctctc
      421 ggcggatccg gcgccgctcc tctactttcg cttgccgtcc gcgcgcgaga tgcgcgaatc
      481 ggagcaaacc gacgtggcgg gccgcggcgc gatcttgaag gaaaagctca aaaacgtcgg
      541 cgtcgaggcg ctctttgccg gcggcgagcc gccgccgttt ctcgcgcacg gtgaaaagct
      601 caaaaagccg ttcggcgtga aacagccgct gcgcttcgcg tatcacgcgg gcaacgcgag
      661 cgtcgacagc ggctttgcca tctcgcagtc tttcgattgg gaggggcggc gcttcgggct
      721 cacgaccgag ctcgacatca tcgcgctcga tcgcaccaag cccgtcgtgc cgagcagctt
      781 ccacggcatc gcgctcgcgg agggcgagga cctaccggtc ggcttttcga tgccgcgcta
      841 cgcgcagcgg tacgccctgc acgcggacgg ccacctgtac ccgtcggcga cgctcgccta
      901 ccgcgaggcg gtgccgctca cgggacgaaa acggccgggc ggcgtgctcg aagcgcgtga
      961 cggctcgttc gtgccggaat cggccctgcg cgtcatcgaa ccgcgcacca cgttcccgag
     1021 cttcgcgacg ggcgaccgca agtgggtgga cgtgtcgatc aagcagcaag cgctcgtcgc
     1081 ctacgtcgga cggaggcccg cgtacgtgac gctcgtcagc acgggacgcg acggcttgat
     1141 ggaccccgag accacgaact cgacggtgcg cggcaccttc atgatctacc aaaaagacgt
     1201 gagctcgacg atggacggcg acgaggatcg ctccgactcg ttcaatctgc acgacgtgcc
     1261 cttcgtgcag tacttccaca agggctacgc cctgcacggc acgtactggc acgacgaatt
     1321 cggcaaggtg cgcagtcacg gctgcgtgaa cctcgcgccc gccgacgctg cgtggctgtt
     1381 cgagtggacc gatccggaag tgccgcccgc ctggcacagc gtcatcaaca aggaccgagg
     1441 tacggtggtg tacgtcaggc cctgacataa cctccaaagg tcttggcacg tcccgaattt
     1501 cagaacacaa cctcgaatca agctgatccc gctatgctca ccccatgccg ggaccgttcg
     1561 atcttaccga tctcctgaaa agagcgcttc aggtcaacgc caaagaagtc cgcgtcgcgc
     1621 ccgggcgccg caccatcgtc tcgctaccgc aaggtgacag cgaggtgcgt ggcgacagct
     1681 ggacaggcga cggtatcgag cagctgatcg cgcccatcct gacgcccgcc gtacggcgca
     1741 tgctggggct cggcatcgca gagtgggatt tcgagctcga gggacgcggc acggtgcgcg
     1801 cgcgcgccga ggtcaaagct ggcgtgccgc acgtcacgtt cgggctcgac cgcgcgcacg
     1861 cctccacggg tggcgctcag gcggagccgc gcatgatgcc ggcccaccgc gcggcgatgc
     1921 cggagccgcg catgccggac ccgccgctcg tcgaacgagg cggggccatg agctccggct
     1981 cgatcccgct cgccgaggag ccgcgcggcg cgagtatctc ctcgccacgg ccgagcttcg
     2041 aggacgcaag cagtccgacc gccgcgatcg accgcctgct cggcgtcatg ctcgaaagaa
     2101 aggcgtcgga cttgcacgtc tcgacgacgt cgccgccgct cttgcgcgtc gatggtgaga
     2161 tgctgcagat cgccggcgaa agcgcgtttt cgaacgagag catgcagcgc atgctgatgc
     2221 cgatcgtgcc ggagcgaaat cgcgaggaat tcgagcgtac gcacgacagc gatttcgctt
     2281 acgagctgcc gggacgcgcg cgctttcgcg tgaacgtctt cgtggatttg cgcggcatgg
     2341 gcgcggtttt tcgcgtgatc ccgagcaaaa tcctgacggt cgacgacctc ggcctgccga
     2401 aggatttgct cacgctctgt cacctaccga aggggctcgt gctcgtcacc ggtcccacgg
     2461 gttcgggcaa atcgacgacg ctcgccgcgc tcatcgacta catcaaccgc acgcgcagcg
     2521 cccacgtcat cacgatcgaa gatccgatcg agttcgtcca cccgaacaag aagtgcctca
     2581 tcaaccagcg ccaagtcggc gaacacaccg actccttcaa gcgggcgctg cgcgcggcgc
     2641 tacgcgaaga ccccgacatc gtactgctcg gcgaaatgcg cgacctcgag accgtctcga
     2701 tcgcgatcga aacggccgag accggccacc tcgtgttc
//
LOCUS       DATIML010000067         4335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2322159, whole genome shotgun sequence.
ACCESSION   DATIML010000067 DATIML010000000
VERSION     DATIML010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4335
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2322159"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1136
                     /locus_tag="VLJ38_01130"
     CDS             <1..1136
                     /locus_tag="VLJ38_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HSU38126.1"
                     /translation="RLCPAPCEAACVLGINDDPVSIKLIERAIADRAFDEGFVQPVLP
                     KTKTGKTVAVVGSGPAGLAAAQQLARAGHSVTVYERDDRIGGLLTYGIPDFKLEKTII
                     ARRVEQMRAEGVTFETSADVGGRITGDDLRARHDAVVLAIGSRKPRDLMVPGRELSGV
                     HYAMDFLTQQNRRVAGEPVPDEGAILATGKHVVVIGGGDTGSDCIGTSHRQGAKSVTS
                     FEIMPRPPEERASTTPWPQWPLMLRTSSSHEEGGSRDWSVSTERISGNGRVEELHCVR
                     VEFRAGKFERVAGSEFILPADLVLLAMGFVHPEREGVVEQLGVELDVRGNVRIDKSCM
                     ASVPGVFAAGDCQRGQSLVVWAIADGRRAARGVDLYLMGRTEL"
     gene            1260..2141
                     /locus_tag="VLJ38_01135"
     CDS             1260..2141
                     /locus_tag="VLJ38_01135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38127.1"
                     /translation="MRPAHNFRWIVPVAIAAVAACGGTNGEDFFDGPAQHGGMAGTAR
                     AGSSGSGGSGAHAGNAATGGSAAGMGASGRTGANGGTDTSGGAGGEPSANGGTGANGG
                     TGAGPATGGTGANDGGSANSSGGTAGAGAAGGSAGMLGAAGSGIAGAAVGSGGMTGGS
                     GMGGRASGMGGRAESMGGRGGATNGGRGGSGPSCDDLLAQAQSALDAAQACNLAMNAP
                     SCRDMVDDPCGCKQPVARADSSETKAYLKALDALKDCHIACAALVCRTPRMTMCAETR
                     GSTESRCTSSDGVISAF"
     gene            2287..2877
                     /locus_tag="VLJ38_01140"
     CDS             2287..2877
                     /locus_tag="VLJ38_01140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38128.1"
                     /translation="MKKPPHAPARPDGSQPDIIVAYKPAGRATLDAIADELVPLPIER
                     QSSSPEIIVHEGMAPRDAFGAILVEARSSSAPLAAPAAPPRAPAVAVTPAQVLPAAVV
                     SVGSGSSLASSNASGGARPAAQALEIFEMMTYVVRGGDVARLSSESARRAFVEEQLLA
                     RLPVRSMADVERVDVTPWTVQGTLVVRVWCRISSGG"
     gene            complement(2929..3627)
                     /locus_tag="VLJ38_01145"
     CDS             complement(2929..3627)
                     /locus_tag="VLJ38_01145"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSU38129.1"
                     /translation="MTVRHLANATYHTLRICIPTVVQSALGTLTTPVCDARLDSWSAA
                     LVRYAKIGIDVIGLEHVPAGEAFVVMSNHRSHYDIPVLFQALRPRRLRMVAKAELFRV
                     PIWAGAMRAAGFVEVNRSNRIAAMRSLERARDAIRAGTSIWIAPEGTRGSGAELGSFK
                     KGGFHLAVGAEARILPLSVLGTERILPARGTHVTDGERVTVRVGAPVDPRDYAERDLK
                     LLMAAVRERIVEGL"
     gene            complement(3650..>4335)
                     /locus_tag="VLJ38_01150"
     CDS             complement(3650..>4335)
                     /locus_tag="VLJ38_01150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38130.1"
                     /translation="LERAARHSADADAYFELEKLPGRAEAAPAEPSPARQFAARALGA
                     LREFAVFVLVLSCGSQVLIENRAVPKWLKPESRPEWMTSVVVYPRLFQGWSMFAPSPP
                     SDDGRVVVDGITKDGRHFDPLTQKEPSFDVQPKDGFRMNQIWGDFHRRIGESRFEAYL
                     DGVREMLKNYHQITGKKADELVSFELWFVSEHIPPPGHPREAPERRHLLSWNAEPNGH
                     PAPRIRQRR"
BASE COUNT          680 a         1457 c         1550 g          648 t
ORIGIN      
        1 gccggctctg cccggcgccg tgcgaggccg cctgcgtgct cggcatcaac gacgacccgg
       61 tgagcatcaa gctcatcgaa cgcgcgatcg ccgatcgcgc cttcgacgaa ggcttcgtgc
      121 agcccgtttt gccgaaaacg aagaccggca agaccgtggc ggtcgtcggc tccggccccg
      181 cgggcctcgc cgccgcgcag cagctcgcgc gcgccggtca cagcgtgacg gtctacgagc
      241 gtgacgaccg catcgggggc ctcctcacct acggcatccc ggatttcaag ctcgaaaaaa
      301 ccattatcgc ccggcgtgtc gagcagatgc gcgccgaggg cgtgacgttc gaaacgtccg
      361 ccgacgtcgg cggacgcatc acgggcgacg acctgcgcgc ccggcacgac gccgtggtgc
      421 tcgcgatcgg ttcgcgcaag ccgcgcgatc tgatggtgcc cgggcgcgag ctttcgggcg
      481 tgcactacgc gatggacttt ttgacgcagc agaaccggcg cgtggcgggc gagcccgtcc
      541 ccgatgaagg cgcgatcctc gcgaccggca agcacgtggt cgtcatcggt ggtggcgaca
      601 cgggcagcga ctgcatcggt acctcgcacc ggcaaggcgc caagagcgtc acgagcttcg
      661 agatcatgcc gcggcccccc gaggaacgcg cctccaccac gccctggccg cagtggccgc
      721 tcatgcttcg aacctcgagc tcgcacgaag agggcggctc gcgcgactgg agcgtctcga
      781 ccgagcgcat cagcggcaac ggccgcgtcg aagagcttca ctgcgtgcga gtcgagttcc
      841 gcgccggcaa gttcgagcgc gtcgccggta gcgagttcat cttgcccgcc gatctcgtgc
      901 tcttggccat gggcttcgtg caccccgagc gcgaaggcgt ggtcgagcag ctcggcgtcg
      961 agctcgacgt gcggggcaac gtgcgcatcg acaagagctg catggcgagc gtcccgggcg
     1021 tattcgccgc gggtgactgc cagcgcgggc agtcgctcgt cgtgtgggcc atcgccgacg
     1081 gccgccgcgc ggcccggggc gtcgacctgt atctgatggg gcgcaccgag ctctgagtac
     1141 tgcgcggatg tgccgcgtac ggtgattcgc ggccgcctca tttgtccggc gccgggtact
     1201 gtttcagtat gacggcaccg cgttgccagc aagcacgtgc cgtgcatagg cttttccgca
     1261 tgcgacccgc gcacaatttc cgctggattg ttccggtggc catcgccgct gtcgccgcgt
     1321 gcggtggaac caacggcgag gactttttcg acggtccagc gcagcacggc ggcatggccg
     1381 gcactgcgcg cgccggcagc tccgggtcgg gcggatcggg cgcgcatgca gggaacgccg
     1441 cgaccggagg ttccgcggcc ggcatgggcg cgagcggccg caccggggcc aatgggggca
     1501 cggatacgag cggcggcgcg ggcggcgagc cgagcgcgaa cggcggcacc ggcgcgaatg
     1561 gcggcacggg cgcaggtccc gcgaccggcg gcactggcgc gaatgacggt ggtagcgcga
     1621 acagcagcgg cggaacggca ggtgcaggcg ctgcaggtgg cagcgcaggc atgctcggcg
     1681 ctgctgggtc cgggatcgcg ggagcggctg tcggcagcgg cggcatgact ggcggctcgg
     1741 gcatgggtgg ccgtgcgtcg ggcatgggcg ggcgcgcaga gagtatgggg ggccgcggtg
     1801 gtgccaccaa tggcggtcga ggcggctcag gcccgagctg tgacgactta ctcgcgcagg
     1861 cacagagcgc gctcgacgcg gcgcaggcgt gcaacctcgc gatgaatgca ccgtcgtgtc
     1921 gtgacatggt cgatgatccg tgcggctgta agcagcccgt ggcgcgcgcg gactcgagcg
     1981 agacgaaagc gtatttgaaa gcgctcgacg cgctcaaaga ttgccacatc gcctgcgcag
     2041 cgctcgtgtg ccgcacaccc aggatgacca tgtgcgcaga gacgcgcggg agcacggaga
     2101 gccgttgtac gagcagtgac ggcgtcatat cggcattctg aaagtcgacg ctcggctcgt
     2161 gccataatcg ctagctaggg ccgcaggccc cagcgcgacc agaagcatga gtcaaggacg
     2221 acgcttgaaa agccagccga cacgcttgac ctgttcgtcc gcgaaacggc tcggcgagga
     2281 gtctacgtga agaagccgcc acacgcgccc gcgcgacccg acgggtcgca gcccgatatc
     2341 atcgtggcgt acaagccggc cgggcgcgcc acgctcgacg cgatcgccga cgagctcgtg
     2401 ccgctaccga tcgagcgcca gagctcgagt cccgaaatca tcgtgcacga aggtatggct
     2461 ccgcgcgacg cgttcggcgc gatcttggtc gaggcgcggt cgagctcggc gccgctcgct
     2521 gcccccgccg cgccgccgcg agcgccagcg gtcgccgtca cgcctgctca agtcctgccg
     2581 gccgccgtcg tttcggtggg atcgggctcg agccttgcgt cgagcaacgc gtccggcggc
     2641 gcgcgtccgg ccgcgcaggc gctcgaaatc ttcgagatga tgacgtacgt cgtgcgcggc
     2701 ggcgacgtgg cgcggctgtc gagtgaaagc gcgcggcgtg ccttcgtcga ggagcagttg
     2761 ctcgcgcgtt tgcccgtgcg ttcgatggcc gacgtcgagc gcgtcgatgt cacgccgtgg
     2821 acggtgcaag gcacgctcgt cgtgcgcgtg tggtgccgga tcagctcggg cggctgagtc
     2881 gaagcaaagt ctgtcacaca ccgagcggct gcgcgccgct ggctcggctc acagcccctc
     2941 gacgatacgc tcgcgcaccg cggccatgag cagcttcaaa tcgcgctccg cgtagtcgcg
     3001 cgggtcgacg ggcgccccga ccctgaccgt cacgcgctca ccgtcggtca cgtgcgtgcc
     3061 gcgcgcgggc aagatgcgct cggtgccgag cacgctcagc ggaaggatgc gcgcctcggc
     3121 gcccacggcc agatgaaagc cgcccttctt gaacgaaccg agctcggcgc cgctgccgcg
     3181 cgtgccctcg ggcgcgatcc agatgctggt tccggcacga atggcgtcgc gcgcgcgttc
     3241 gagactccgc atggcggcga tgcgattcga gcggttgacc tcgacgaaac ccgcggcgcg
     3301 catggcgccc gcccaaatcg gcacgcgaaa gagctcggcc ttcgccacca tgcgcaaccg
     3361 cctggggcga agcgcttgga agagtacggg gatatcgtag tgggaacgat gattcgacat
     3421 cacgacgaac gcctcgccgg ccggcacgtg ttcgaggccg atcacgtcga tcccgatctt
     3481 ggcgtagcgc acgagcgcgg ccgaccagct gtcgaggcgc gcgtcgcaca ccggcgtcgt
     3541 gagcgtcccg agcgcgctct gaaccacggt cgggatgcag atgcgcagcg tgtggtacgt
     3601 ggcgttcgcc aggtggcgga ccgtcatgct ctggcctcgg gagaacggct cagcgccgct
     3661 ggcgaatgcg gggcgcgggg tgcccgttcg gctcggcgtt ccacgacaac aggtgccgcc
     3721 gctcgggcgc ctcgcgcggg tgcccgggcg gcgggatgtg ctcgctcacg aaccacagct
     3781 cgaacgagac gagctcgtcc gcctttttgc ccgtgatttg gtggtagttt ttgagcatct
     3841 cgcgcacgcc gtcgaggtac gcctcgaaac gcgactcgcc gatgcggcga tggaagtcgc
     3901 cccagatctg gttcattcga aagccgtcct tcggttgaac gtcgaagctc ggctcctttt
     3961 gagtcaatgg atcgaaatga cggccgtcct tcgtgatgcc gtccacgacc acacggccgt
     4021 cgtcgctcgg cggtgagggc gcgaacatgc tccagccttg aaacagccgc gggtagacga
     4081 ccaccgaggt catccactcc ggccgcgact cgggcttgag ccacttcggc acggcgcggt
     4141 tctcgatcaa gacctgactg ccgcaactga ggacgagcac gaagacggca aattctcgca
     4201 gcgccccgag ggcacgcgcc gcgaactggc gggccgggct cggctcggcg ggcgccgctt
     4261 cggctcgacc cggcagcttc tcgagctcga aataagcgtc cgcgtccgcg ctgtgcctcg
     4321 ccgcgcgctc gagcc
//
LOCUS       DATIML010000068         1666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2322477, whole genome shotgun sequence.
ACCESSION   DATIML010000068 DATIML010000000
VERSION     DATIML010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2322477"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..941
                     /locus_tag="VLJ38_01155"
     CDS             <1..941
                     /locus_tag="VLJ38_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HSU38131.1"
                     /translation="LRRPPGREAYPGDVFYLHSRLLERAAKMGERWFVVRKGTQMKPG
                     DEKFRGVDGQAYIGEVGKHDAQKSLESRPEKAELELVMDPHSGGSLTALPIIETQAGD
                     VSAYIPTNVISITDGQIFLESDLFYSGVRPAINVGISVSRVGGNAQIKAMKKVAGTLR
                     LDLAQYRAMEAFAQFASDLDATSRAQLERGRRLVELLKQDQYVPLPVERQVLIVFAGV
                     NGYTDKLPVESLRDYETELYRFIGDKHPDIFETIKKTRDISDELKKKIEQTLVEFGKH
                     FVASQRGNGAAEPAPAAEPSEKPAKKTKAKPAEEHA"
     gene            978..>1666
                     /gene="atpG"
                     /locus_tag="VLJ38_01160"
     CDS             978..>1666
                     /gene="atpG"
                     /locus_tag="VLJ38_01160"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HSU38132.1"
                     /translation="MPSLKAIRKRISSVKGTQKITRAMKMVSGARLARAQQRILALRP
                     YAVRTSAMLAHVTAAVAESETSAFDHPLLTRREEKRALILVITSDRGQAGAFNTNIAR
                     AAERLWHEKQQAGVEVQLATIGRKGRDYFTRRKAPIFHAFTGVWEQLDIEMARQVART
                     ILAPFLRSEVDSIYLVYNEFKSAMSQKVVTEPLLPLVMPERQPEPEAADWEKHREYLF
                     LQDQGQLMARLV"
BASE COUNT          325 a          577 c          527 g          237 t
ORIGIN      
        1 tgctgcgccg cccgccgggc cgcgaggcct acccgggcga cgtcttctac ctgcactcgc
       61 gcctgctcga gcgcgccgcc aaaatgggcg agcgctggtt cgtcgtgcgc aagggcacgc
      121 agatgaagcc cggcgacgag aagttccgcg gcgtcgacgg ccaggcttat atcggcgagg
      181 tcggcaagca cgacgcgcag aaatcgctcg agtcgcgacc cgaaaaggcc gagctcgagc
      241 tcgtgatgga tccgcattca ggcggctcgc tcacggcgct gcccatcatc gagacgcagg
      301 cgggcgacgt ctccgcgtac atcccgacca acgtgatttc gatcacggat ggccaaatct
      361 tcctcgaaag cgatctcttc tattccggcg tgcgcccggc catcaacgtc ggcatctcgg
      421 tgagccgcgt cggcggcaac gcgcaaatca aggcgatgaa gaaggtcgcc ggcacgctgc
      481 gcctcgatct cgcgcagtac cgcgcgatgg aagccttcgc gcagttcgcg agcgatctcg
      541 acgccacctc acgcgcgcag ctcgagcgcg ggcgccggct cgtcgagctc ttgaagcagg
      601 accagtacgt gccgctgccg gtcgagcgcc aagtgctgat cgtgttcgcg ggcgtgaacg
      661 gctacaccga caagctgccc gtcgagtcgc tccgcgacta cgagaccgag ctctatcgct
      721 tcatcggcga caagcacccg gacatcttcg aaaccatcaa gaagacgcgc gacatcagcg
      781 acgagctcaa gaagaagatc gagcagacgc tcgtcgagtt cggcaagcac ttcgtcgcga
      841 gccagcgcgg caacggcgcc gctgaacccg cgcccgccgc cgaaccctcg gaaaagcccg
      901 ccaagaagac caaggccaag cctgccgagg agcacgcgta gccgccgggc ccaagcgcca
      961 gcgctggaac aagtcgcatg ccgagtctca aggcgatccg caaacgcatc agtagcgtca
     1021 agggcacgca gaaaatcacg cgcgccatga agatggtgtc gggcgctcgc ctcgcgcgcg
     1081 ctcagcagcg catcttggcg ctgcgcccct atgccgtccg cacgtcggcc atgctcgccc
     1141 acgtgacggc ggccgtggcc gaaagcgaga cctcggcctt cgatcatccg ctgctcacgc
     1201 ggcgcgagga gaagcgcgcg ctcatcctcg tcatcacgag cgatcgcggg caggccggcg
     1261 cgttcaacac gaacatcgca cgtgccgccg aacgcctctg gcacgaaaag cagcaggcgg
     1321 gcgtcgaagt acagctcgcg accatcggcc gcaagggtcg cgactacttc acgcgccgga
     1381 aggcgccgat cttccacgcc ttcacgggtg tctgggagca gctcgacatc gagatggcgc
     1441 gccaggtcgc gcgcacgatc ctggcgccgt tcctgcgctc ggaggtcgac tcgatttacc
     1501 tcgtctacaa cgagttcaag agcgcgatga gccagaaggt cgtcaccgag ccgctcttgc
     1561 cgctcgtcat gcccgagcgg caacccgagc ccgaggcggc cgactgggaa aagcaccgcg
     1621 agtacctgtt cttgcaagat caggggcagc tcatggcgcg actcgt
//
LOCUS       DATIML010000069         2819 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1168763, whole genome shotgun sequence.
ACCESSION   DATIML010000069 DATIML010000000
VERSION     DATIML010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2819
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1168763"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VLJ38_01165"
     CDS             <1..524
                     /locus_tag="VLJ38_01165"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="substrate binding domain-containing protein"
                     /protein_id="HSU38133.1"
                     /translation="FVRFEEENVDVAVRIGTLEDSAAFAQRLRNLSWITAAAPSYLER
                     HGIPGSPAALARHQCLKFSLPNGRLQEWSFATDGVVSKLDVRGPLTADLGEGLVEAAL
                     AGVGLIQAHDYMLAPEIASGRLLEVLRPYAALGPPISVLCAPGRRRSPKVRAFAAFAA
                     SVIGELSDTARAP"
     gene            580..2157
                     /locus_tag="VLJ38_01170"
     CDS             580..2157
                     /locus_tag="VLJ38_01170"
                     /inference="COORDINATES: protein motif:HMM:NF021524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 family protein"
                     /protein_id="HSU38134.1"
                     /translation="MTARSSSFRRRWLVPIAVLTVLAQVLFWGLYAFDHASHDSARGS
                     SFARYLDFDPNNITDATSSLAGMNAAVFGIVITVVSIIVQLSAERYTGVARMFLNDRV
                     NLGVAAYYVVSCVVGVWLSVTLKHDYVPYWTLFAMICVTTGSLVLMGPYFGYVFRFLE
                     PMNIVARIRKEAVSTAALGSSEERSEACSDAQVATIGAMEELTDITSNSISGKDKIIA
                     SGAVDALKDFTIEYVQHKRRAAAHWFRIGPGIRENPDFVAMDPESLSDLEERRTWVEW
                     KVLRQYLGIYNESLSEMRDINYLIAIDTRYIAEAAGEAGDTELLELCVRFMNSYLRAT
                     LNARDVRTAYNLLNQYRLLVESMLRHGNSKAALEGVKHMAYYGHVSFDMKLTFVTETI
                     AYDVSALCQYANELGSSEEDAMLRQFLDLDRPLRVSAQEGALLGVRKAQVKLAAYYLM
                     RGLEDKARLISQDMDHEPKERLASIRSALEHVTSKDFWEIIDRGRNFEYMPPAQRACL
                     ATFFGWLNIASDSSALS"
     gene            complement(2170..2478)
                     /locus_tag="VLJ38_01175"
     CDS             complement(2170..2478)
                     /locus_tag="VLJ38_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38135.1"
                     /translation="MTSPPARQRPPTPSTPDDQSSAVRERSSPPAPPVSPLSSGAPRE
                     RLEAKLRTARAVLDDLPASDERARLLHIAIMRRDEALLDGVLGALGVQRNSVPPPASK
                     "
BASE COUNT          479 a          918 c          908 g          514 t
ORIGIN      
        1 gcttcgtgcg tttcgaggaa gaaaacgtcg atgtcgccgt gcgcatcggc acgctcgagg
       61 actcggccgc cttcgcgcag cggcttcgca acctctcgtg gataacggcc gccgcgcctt
      121 cctacctcga gcgacacggg atcccggggt cacctgccgc cttggcgcga caccagtgcc
      181 tcaagttctc gctgccgaac gggcgcctcc aggagtggag cttcgcaacg gacggcgtcg
      241 tttccaaact cgacgtgcgc gggccgctga ccgccgatct gggtgagggg ctcgtcgaag
      301 cggcgctcgc aggggtcggc ttgattcagg cccacgacta catgctcgct cccgaaatcg
      361 cgagcggtcg cctgctcgaa gtgctccgcc cctacgcagc gctcgggccg cccatctccg
      421 tattgtgcgc gcccggccgt cgtaggtcac cgaaagtgcg tgcgttcgcg gccttcgccg
      481 cgagcgtgat tggcgagctc agtgacacgg cgcgagcacc gtgatccacc aggcgacggt
      541 cgttgagcct actccaccgg tagagtaaga ccgggggcaa tgacggcacg ttcttcgagc
      601 ttccggcgcc gatggctcgt gccgatcgcg gtgctcacgg tgctcgctca agtcctcttc
      661 tggggactct atgctttcga tcacgcgagc cacgacagtg cacgcggctc gagcttcgcg
      721 cgctacctcg acttcgaccc caacaacatc accgacgcga cgagctcgct cgcgggcatg
      781 aatgccgccg ttttcggcat cgtgatcacg gtcgtcagca tcatcgtgca gctttcggcc
      841 gagcgctaca cgggcgtggc gcgcatgttc ttgaacgatc gcgtgaacct cggcgtcgcc
      901 gcctactacg tcgtctcctg cgtcgtcggc gtgtggctga gcgtcacgct caagcacgac
      961 tacgtgccgt actggacgct gttcgcgatg atctgcgtga cgacgggcag cctcgtcttg
     1021 atgggtccct acttcggcta cgtgttccgc ttcctcgagc cgatgaacat cgtcgcgcgt
     1081 atccgcaagg aagcggtctc gacggcggcg ctcggctcga gcgaagaacg atccgaagcg
     1141 tgctccgacg cccaggtcgc gaccatcggc gccatggaag agctcaccga catcacgagc
     1201 aacagcatct ccggcaaaga caagatcatc gcgagcggcg cggtcgacgc gctcaaggat
     1261 ttcacgatcg aatacgtgca gcacaagcgg cgcgccgcgg cgcactggtt tcggatcggc
     1321 cccggcatcc gggaaaatcc agacttcgtc gcgatggatc ccgagtcgct ctccgatctc
     1381 gaggagcggc gcacctgggt cgagtggaaa gtgctccggc agtacctcgg catctacaac
     1441 gagtcgctct ccgagatgcg cgacatcaat tacctgatcg ccatcgacac gcgttacatc
     1501 gccgaggcgg ccggcgaggc gggcgacacc gagctactcg agctctgcgt gcgcttcatg
     1561 aactcgtatt tgcgcgccac gttgaacgcc cgcgacgtga ggaccgccta caacctcttg
     1621 aaccagtatc gtctcctcgt cgaaagcatg ctgcggcacg gcaattcgaa agcggcgctc
     1681 gaaggtgtca agcacatggc gtactacggc cacgtgagct tcgacatgaa gctcacgttc
     1741 gtgaccgaga ccatcgccta cgacgtgtcc gcgctgtgcc agtacgcgaa cgagctcggg
     1801 tccagcgagg aagacgccat gctgcgtcaa tttctcgacc tcgatcgccc gctgcgcgtg
     1861 agcgcgcaag agggcgcgct cctcggcgtg cgaaaagcgc aggtgaagct cgcggcctac
     1921 tacttgatgc gcggcctgga ggacaaggct cggctcatct cccaagacat ggaccacgag
     1981 cccaaggagc gcttggcgtc gatccgcagc gcgctcgagc acgtcacgag caaggacttt
     2041 tgggagatca tcgatcgcgg gcgaaacttc gagtacatgc cgcccgctca gcgcgcgtgc
     2101 ctcgcgacgt tcttcggttg gctcaatatc gcgagcgact cgagcgcgct ctcctgacgc
     2161 cgcgcgcgct cacttggacg cgggcggcgg cacactgttg cgctgcacgc cgagcgcgcc
     2221 gagcactccg tcgagcagcg cttcgtcccg acgcatgatc gcgatgtgga gcaaacgtgc
     2281 ccgctcgtcc gaggccggca ggtcgtcgag cacggcgcgc gcggtccgga gcttcgcttc
     2341 gagccgctcc cggggggcgc ccgacgaaag cggcgagacg gggggcgcgg gcggcgaaga
     2401 gcgctcgcgc acggcggacg actgatcgtc cggggtgctc ggcgtcggtg gtcgctggcg
     2461 ggcaggagga gaggtcatgc tttggcctgg ggaaacgctg ctgcttcttg aacacttacg
     2521 ttgcagaatt cgttcccttc tattcaactc cgtagggggg gctgggcttt gtggctcaag
     2581 cccctgaaaa aacgcaggtt ttggaggttc cagggtggct ccgagtaggc tcgtgtgggg
     2641 cagtcttccg cccgcattgg attgagcgga tgcgcatcac ggcctagcta tgacgagtcg
     2701 atcacgggcc cgcgcttttc ctgcgcttgc caagcgtcgt gtcggtttct atggtcccgc
     2761 tgtcgtgcgc gcctggctgt tcattccgga aagtcccgaa tcaccacgga tgttcgaga
//
LOCUS       DATIML010000070         2603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4344786, whole genome shotgun sequence.
ACCESSION   DATIML010000070 DATIML010000000
VERSION     DATIML010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4344786"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VLJ38_01180"
     CDS             <1..396
                     /locus_tag="VLJ38_01180"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSU38136.1"
                     /translation="RPFSVKEVPPMASSKVQFVNDVNFDETVLAASGKILVDFTATWC
                     GPCKAQAAILDKVADHSDAVVLKVDVDECPELAARFAVRGMPTLLVFENGKETGRRLG
                     LASEAAVLALVGQKPRAVPRDASVKPSAA"
     gene            complement(450..878)
                     /locus_tag="VLJ38_01185"
     CDS             complement(450..878)
                     /locus_tag="VLJ38_01185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38137.1"
                     /translation="MASSISFTLPARLLLIAACSSALFAACSSSNDAVQTVPSAGKGG
                     SGGHGATGASGGMGGSGGMGGSAGSTTGGKAGGGGSAGSATAGSGTGGTTGGAAGAGA
                     GAGGEETGGAGAGNATGGSAGEPTAGANEGGASAAAGAGG"
     gene            935..1282
                     /locus_tag="VLJ38_01190"
     CDS             935..1282
                     /locus_tag="VLJ38_01190"
                     /inference="COORDINATES: protein motif:HMM:NF016250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HSU38138.1"
                     /translation="MTPLGRYVVETLVMLTGVVALAVLLLSVGRRFGIGRPSGPLELV
                     GRLPLDARRAVYLVRVGEIVYVVGASENGLNKLGELPKDAAMLPQGTPVDPAFRGVLE
                     RVLRRSTPPAGDG"
     gene            1296..1967
                     /gene="sctR"
                     /locus_tag="VLJ38_01195"
     CDS             1296..1967
                     /gene="sctR"
                     /locus_tag="VLJ38_01195"
                     /inference="COORDINATES: protein motif:HMM:NF009438.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030257 - type III protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0030254 - protein secretion by the type III
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     subunit SctR"
                     /protein_id="HSU38139.1"
                     /translation="MTSDFFAHPLTLVFAIGFATLLPFAFMTLTAFVKISTVLQIVRG
                     AIGAQSVPTNTVIMAFAGALTLLAMAPVGSRIAERAGPLLEPAHVEDSAAWIGDMLVA
                     TREPIRAFLKANASARERERFFQIARAARPEPERAAVGRDDLVILVPAFVVSELIGAF
                     ALGFAIYLPFLVIDLVVSNVLLALGMQMMSPTQVSLPFKLLLFVAIDGWGLLAQTLVT
                     GYRAG"
     gene            complement(2082..>2603)
                     /locus_tag="VLJ38_01200"
     CDS             complement(2082..>2603)
                     /locus_tag="VLJ38_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSU38140.1"
                     /translation="GCNTPLVLSFDAAPVTFTNPGGTFDVAGRETLVQTAWVSSATPW
                     LVFDRNSNGTIDDGVELFGSMSRLADGQRAKNGFRALALLDADGDGWITARDPAFARL
                     ALWRDLDQDRVSSPGELTPLADSVIALSLTYEDVPRCFAGSCERERADLVFRDHGGNE
                     RHGSVVDVYLAEH"
BASE COUNT          384 a          896 c          884 g          439 t
ORIGIN      
        1 cgacctttct ccgtgaagga ggtgccgccg atggcatcca gcaaagtgca attcgtgaat
       61 gacgtgaact tcgacgagac ggtgctcgct gcgtcgggaa aaatcttggt cgatttcacc
      121 gcgacgtggt gcgggccgtg caaggcccaa gcggcaattt tggacaaggt cgccgatcat
      181 agcgacgccg tcgtcctgaa ggtggacgtc gacgagtgcc ccgagctcgc cgcgcgcttc
      241 gccgtacggg ggatgccgac gctgctcgtg ttcgagaatg ggaaggagac ggggcgacgt
      301 ctcggactcg cgagcgaagc cgcggtgttg gcgctcgtgg ggcagaagcc acgcgcggtg
      361 ccgcgcgacg cgagcgtgaa gccgagcgcc gcgtaacccg acttgaacgt gaagccgagc
      421 gcccgcgtga accgggctgg ccgttgacgt tagccgcccg cgcccgctgc ggcgctcgct
      481 ccgccttcat tcgcgccggc cgtgggttca ccggcgctgc cgccggttgc gttccccgca
      541 ccggcgccgc ccgtctcttc gccgccggca cctgcgcctg cgcctgcggc cccgcccgtg
      601 gttccacccg taccgctacc ggcggtcgcc gaacctgcgc tgccaccgcc gccggccttg
      661 ccgcccgtcg tcgaacccgc ggagccgccc atcccgccgc tgccgcccat cccgccgctg
      721 gcgcccgtcg caccgtggcc gcccgagccg cccttgcccg cgctcggcac cgtttgcacc
      781 gcgtcgttcg acgaggagca cgccgcgaag agcgcactcg aacaagcggc gataagcagc
      841 aaacgtgcgg gaagcgtaaa ggaaatggac gaggccatgc gccgcataca atcccgagcc
      901 cgaggctgcg tcaacgtgtt acggtccgcc gcgggtgacg ccgttaggcc ggtacgtcgt
      961 cgagacgctg gtcatgttga ccggggtggt ggcgctcgcc gtcttgctgc tttcggtggg
     1021 gcgacgcttc ggcatcggac gaccgtcggg accgctcgag ctcgtcgggc ggctgccgct
     1081 cgatgcgcgc cgtgcggtgt acctcgtgcg ggtgggcgag atcgtttacg tcgtgggcgc
     1141 gagcgaaaac gggctgaata agctcggtga gctgccgaaa gacgcggcca tgctgccgca
     1201 aggcacgccc gtggaccctg cgtttcgcgg cgtgctcgaa cgcgtgctgc gccgctccac
     1261 gccgcccgcc ggcgacggct gagccccggg gcggcatgac ctccgatttc ttcgcgcacc
     1321 cgctcacgct cgtcttcgcg atcggctttg cgacgctctt gccgttcgcg ttcatgacgc
     1381 tcactgcctt cgtcaagatc tcgacggtgc tccaaatcgt gcgcggcgcg atcggcgcgc
     1441 agagcgtccc gaccaatacc gtgatcatgg cgttcgcggg cgcgctcacg ttgctcgcga
     1501 tggcgccggt cggctcgcgc atcgccgaac gcgccgggcc gctgctcgaa cccgcgcacg
     1561 tcgaagacag cgccgcctgg atcggcgaca tgctcgtggc gacgcgcgaa ccgatccgcg
     1621 ccttcctcaa agcgaacgcg agcgcccgtg aacgcgagcg cttcttccaa attgcgcgcg
     1681 ccgcacgccc cgaaccggaa cgcgccgccg tggggcgcga cgatctcgtc atcttggtgc
     1741 cggcgttcgt cgtgagcgag ctcatcggcg cgttcgcgct cggcttcgcg atttacctgc
     1801 cgtttctcgt gatcgatctg gtcgtctcga acgtgctgct cgcgctcggc atgcagatga
     1861 tgagtcccac gcaggtgagt ctgccgttca agctgcttct gttcgtcgcc atcgacggct
     1921 gggggctgct cgcgcagacg ctcgtgaccg gctacagagc gggttagtgg tagctctact
     1981 gctggtcgtc actcaggagg ttgggatcta ggctcgcgtc ctcgtgccgg cgttcgtcgt
     2041 gaccgagctc attggcgcgc tcgcgcgacg gctcacctgc gtcagtgctc ggctaggtag
     2101 acgtcaacga cactgccgtg ccgctcgttg cctccgtgat cgcggaacac gaggtcggca
     2161 cgctcgcgct cgcagctgcc cgcgaagcag cgcggcacgt cctcgtaggt gagagacagc
     2221 gcgatcacgg agtccgccag aggggtgagc tcgcccggtg acgacacacg gtcttgatcg
     2281 agatcgcgcc acaaggcgag tcgggcaaag gcgggatcgc gcgcggtgat ccaaccgtcg
     2341 ccgtcggcgt cgagcagagc gagcgcgcga aagccatttt tggccctttg gccgtcggcg
     2401 aggcgcgaca tcgatccgaa gagctccacg ccgtcgtcga tcgtcccgtt cgaattgcga
     2461 tcgaacacga gccacggcgt cgcgctgctc acccacgcgg tctggaccag cgtttcacgg
     2521 ccggccacat cgaaggtgcc tccgggattc gtgaacgtga cgggtgcagc gtcgaaggaa
     2581 agcaccagcg gcgtgttgca acc
//
LOCUS       DATIML010000071         2712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1746559, whole genome shotgun sequence.
ACCESSION   DATIML010000071 DATIML010000000
VERSION     DATIML010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1746559"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VLJ38_01205"
     CDS             complement(<1..226)
                     /locus_tag="VLJ38_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38141.1"
                     /translation="MATCEVCSTLGRAQKGPGKRVLVGSRLVTLCATHARAVPALPKT
                     GMDELRRAFHERKGQRSLIDRRQELDRRVFP"
     gene            complement(288..1247)
                     /gene="gshB"
                     /locus_tag="VLJ38_01210"
     CDS             complement(288..1247)
                     /gene="gshB"
                     /locus_tag="VLJ38_01210"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HSU38142.1"
                     /translation="MRFLFVMDPAETMHPAKDTTFAFMRGALARRHETFHCLPRDIAN
                     EGRTVTARARAIRVADTAPHLELAAETTLDLATLGAVFIRKDPPFDPPYVHLTHQLDL
                     VKHRVLVLNDPRGLRDANEKLFAFHFAEYMPHSRVTADPREIIAFVETVGGRAVLKPL
                     DGAGGSGVVVLERGDKNLRSLADVWTSEGKKLALVQEYLPAIRTGDKRVLVLDGKPLG
                     AILRVPREDDVRANLHVGGRAESTTLTPKELAAVAAIGPKLVEHGLFFVGLDFIGERL
                     IEVNVTSPTGIQELSRFVGRPVEQDVIAWIEERVQKRLAIAPV"
     gene            1313..>2712
                     /locus_tag="VLJ38_01215"
     CDS             1313..>2712
                     /locus_tag="VLJ38_01215"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSU38143.1"
                     /translation="MLPLVVGTLVASVLAVGLPRTSGARAPARAGAATESRLASRTAL
                     AVLARGGNAVDAVIAAALVAGVVAPSSSGLGGGGFAVVYRAADRGVSVFDFRETAPAA
                     IDTAAFERRPLPAAERGKLVGVPGEARGLAELHRRFGKRPWAELVEPAERYARDGFGV
                     ETHLASVIASADAPRYRAAASLARVFWHAETPVVVGTRVKRPELARTLHVLATSGPEA
                     LYGGPIASDIIAAARRFGGALTPDDLRAYAVREREPLRFAWEGYEIVTMPPPSAGGLF
                     LAEVLQSFTRDELARAGLESGLGLHLLAEVMRGALADRARYSGDPDVLPVDTRALFAP
                     ARLAARKARILPERTRSVAALAGEDHGTHALVVADADGNVVSLTTTVNTAFGAEIDAE
                     TSGIVLNDELDDFTARSATDALGVRSPPNSARPALRPTSSMMPTLVLRGGKPVFALGG
                     SGGYSIPPSVTYTLLRL"
BASE COUNT          368 a          906 c         1007 g          431 t
ORIGIN      
        1 ccggaaagac acgccgatcg agctcctggc ggcggtcgat gagcgagcgc tggcctttgc
       61 gttcgtggaa ggcgcgccgg agctcgtcca tgccggtttt gggcagcgcg gggacggcgc
      121 gcgcgtgcgt cgcgcagagc gtgacgagcc gggacccgac cagcacgcgc ttgcccggcc
      181 ctttttgggc ccttccgagc gtcgagcaca cctcgcacgt cgccatgcgt cgaggctccg
      241 ccgaagacgc cgtgcgggcc aagttttcgg cgctgcgact gcgtacgtca gaccggcgcg
      301 atcgcgaggc gtttttgtac gcgctcttcg atccacgcga tcacgtcttg ttcgacggga
      361 cgaccgacga agcggctgag ctcctgaatg cccgtggggc tcgtgacgtt gacctcgatc
      421 aaacgctcgc cgatgaagtc gaggccgacg aagaagagtc cgtgttcgac gagcttcggt
      481 ccgatcgcgg cgacggcggc gagctctttg ggagtgagcg tcgtcgactc ggcgcggcca
      541 ccgacgtgca ggttcgctcg cacgtcgtct tcgcgcggga cgcgcaggat ggcgccgagc
      601 ggcttgccgt cgaggacgag gacacgtttg tcaccggtcc gaatggcggg cagatactcc
      661 tgcacgagcg cgagcttttt gccttcactc gtccagacgt cggcaaggga gcgcaggttc
      721 ttgtcgccac gctcgagcac gacgacgccg ctgccgcccg cgccgtcgag cggcttgagc
      781 acggctctgc cgccgacggt ctcgacgaac gcgatgattt cgcgcggatc ggccgtgacg
      841 cgcgagtgcg gcatgtactc ggcgaaatga aacgcgaaga gcttctcgtt cgcgtcgcgc
      901 aagccgcgcg ggtcgttcaa gacgagcacg cgatgtttga cgagatcgag ctggtgcgtg
      961 aggtggacgt acggcgggtc gaagggcgga tccttgcgga tgaagacggc gccgagcgtc
     1021 gcgaggtcga gcgtggtttc ggcggcgagc tcgaggtgcg gcgccgtgtc cgcgacgcga
     1081 atggcgcgcg cgcgagccgt gacggtgcgg ccttcgttgg cgatgtcgcg cggcaggcag
     1141 tgaaaggttt cgtgacgccg cgcgagcgcg ccgcgcatga aggcgaaggt cgtgtccttg
     1201 gccggatgca tggtctcggc ggggtccatc acgaacagga agcgcatggc gactcgcccg
     1261 gagtgtaaca ccctgataga ttcgggcgcg gatgcggcgc ctgctttcgc gaatgctgcc
     1321 gctcgttgtc gggacgctcg tcgcgagcgt gctcgccgtc ggattgccgc ggacgagcgg
     1381 cgcgcgcgct ccggctcggg ccggtgcggc cacggaaagc cggctcgcga gtcgaacggc
     1441 gctcgccgtg ctcgccaggg gcggaaacgc cgtcgatgcc gtgatagccg ccgcgctcgt
     1501 cgcaggcgtg gtcgcgccga gttcgagcgg tctcggtggc ggaggtttcg cagtcgtgta
     1561 tcgggcggcc gatcgcggcg tgagcgtgtt cgattttcgc gaaacggcgc cggccgcgat
     1621 cgacacggcg gcgttcgagc gacgcccgct gcccgccgcc gagcgcggca agctcgtcgg
     1681 cgtgccgggt gaagcgcgcg ggctcgccga gttgcaccgc cgcttcggca agcgtccgtg
     1741 ggccgagctc gtcgaaccgg ccgagcgcta cgcacgtgac ggcttcgggg tcgagacgca
     1801 cctcgcgtcg gtcatcgcca gcgcggacgc tccgcggtac cgggccgcgg cgtcactcgc
     1861 acgcgtgttt tggcacgctg aaacgcccgt tgtcgtgggg acgcgcgtga agcgcccgga
     1921 gctcgcgcgc acgctgcatg tgctcgccac ctcgggcccc gaagcgcttt acggcgggcc
     1981 gattgcgagc gacatcatcg cggccgcgcg gcgcttcggc ggcgcgctca ccccggacga
     2041 tttacgggcc tacgccgtgc gtgagcgcga gccgctccgc ttcgcgtggg agggctacga
     2101 gatcgtgacg atgccgccac cgtcggcggg cggcttgttc ctcgcggagg tgctccagag
     2161 cttcacgcgc gacgagctcg cgcgcgccgg tctcgagagc gggctcggct tgcacctttt
     2221 ggcggaggtg atgcgcggcg cgctcgccga tcgcgcgcgt tacagcggcg atccggacgt
     2281 gctgcccgtg gacacgcgcg cgctcttcgc gcctgcgcgg ctcgcggcgc gcaaggcgcg
     2341 catcctgccc gaacgcacgc gctcggtcgc cgcgctcgcg ggcgaggatc acggcacgca
     2401 cgcgctcgtg gtcgccgacg ccgacggcaa cgtcgtgtcg ctcacgacga ccgtgaacac
     2461 cgcgttcggc gccgagatcg acgctgagac gagcggcatc gtcttgaacg acgagctcga
     2521 cgacttcacg gcgcgctcgg cgacggacgc gctcggcgtg cgctcgccgc ccaattcggc
     2581 ccggcccgcg ttgcggccca cctcgagcat gatgccgacg ctggtgctgc gcggcggcaa
     2641 accggtgttc gcgctcgggg gctcgggcgg ctactcgatc ccgccgagcg tcacctacac
     2701 cttgctgcgc ct
//
LOCUS       DATIML010000072         2300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5212037, whole genome shotgun sequence.
ACCESSION   DATIML010000072 DATIML010000000
VERSION     DATIML010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5212037"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VLJ38_01220"
     CDS             <1..544
                     /locus_tag="VLJ38_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HSU38144.1"
                     /translation="VGATHRDLGRLQAEGKFREDLFARLNEYKLVLPPLYERKEDVFV
                     LLSSFLARLGRTDLKVSFPYMTALLHYDWPYNVRELEACIKRSVALADGPVLLPEHLP
                     EAVTLAMEGYGHAAPLPGQPSRLPPMAGQGTPSEQELRELLNAHGGNVAAVGRVLGKA
                     RMQIHRWMKRYAIEVEDYRS"
     gene            592..>2300
                     /locus_tag="VLJ38_01225"
     CDS             592..>2300
                     /locus_tag="VLJ38_01225"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing)"
                     /protein_id="HSU38145.1"
                     /translation="MAAKRKAGGSKDGDGARRKPPGNGAGGDQTGFPSEEPVPLHEIA
                     QTRYLNYALSVITSRALPDVRDGLKPVQRRILYTMWQQGVGPTDKHRKCAKIVGDVMG
                     NYHPHGDSAIYDALVRMAQSFSLRVPLVDGSGNFGSLDGDPAAAYRYTECRLAPLASR
                     LLDELDQNTAPFRPNYDGTKSEPVVLPAQLPHLLVNGATGIAVGMATNIPPHNPEEVC
                     SAAVRLLDALVEEKQLSSRELCRTIKGPDFPTGGEIISSSEELKQVYETGQGTIKVRG
                     TWRQGKDGKNSKTVEITSIPYAVNKSTLVERIAEVAVSRKLPMLLDVRDVSTDDVCIE
                     LELKKEADEKLVFAYLYKNTPLQSGFSVNMTCLVPTEQVDVGRPERLDLQSMLWHFLH
                     FRLEVVTKRLQNELDGLERRMHILEGFAKVFDALDEIIKLIRKSEGKADAAKTIMAKF
                     DLDAEQTDAILELKLYRLARLEILVIKKELDEKRKRAKEIKALLTAAATKGRWAIVRK
                     ELEALLGSFGKNGKRRTLLVETGGEVEFTDEDLIVAEDAYVLLTTDGWIKRQKEIKDT
                     QSTR"
BASE COUNT          459 a          787 c          725 g          329 t
ORIGIN      
        1 cgtgggcgcg acccaccgtg atcttggccg cctgcaagcg gaaggcaaat tccgcgagga
       61 tctgtttgcg cggctgaacg agtacaagct cgtcttgccg ccgctttacg agcgaaaaga
      121 agacgtcttc gtgctgctct cgagctttct cgcgcggctc ggccgcaccg acctcaaggt
      181 gtcgttccca tacatgacgg ccctcctcca ctacgattgg ccctacaacg tccgcgagct
      241 cgaagcgtgc atcaaacgtt cggtcgcgct cgccgacggc cccgtgctct tgcccgagca
      301 cctccccgaa gccgtgacgc tcgccatgga aggctacggt cacgccgcgc ccctccccgg
      361 ccagccgagt cggctaccgc ccatggccgg ccaaggcacc ccgagcgagc aggagctccg
      421 cgagcttttg aacgctcacg ggggcaacgt cgcggccgtg ggccgggttc tcggcaaggc
      481 gcgcatgcag atccaccgct ggatgaagcg ctacgccatc gaggtcgagg actatagaag
      541 ttgacggccg tcgccgaaac ccggtagcac cgggcccgag cgatcgagcg gatggcagcc
      601 aaacgtaagg caggcggtag caaggacggc gacggcgcgc ggcgtaagcc gcccgggaac
      661 ggcgcgggcg gggaccaaac cgggttcccg agcgaagaac ccgtgccgct ccacgagatc
      721 gcgcagacgc gctacctgaa ctacgcgctc agcgtcatca cgagccgcgc gctgccggac
      781 gtgcgtgacg gcctgaagcc cgtgcagcgg cgcatcctct acacgatgtg gcagcagggc
      841 gtgggcccga cggacaagca ccgaaagtgc gcaaagatcg tgggcgacgt gatgggcaac
      901 tatcacccgc acggcgactc cgcgatttac gacgcgctcg tgcgcatggc gcagtcgttc
      961 agcttgcgcg tgccgctcgt cgacggctcg ggcaatttcg gctcgctcga cggcgacccc
     1021 gcggccgcct accgctacac cgagtgccgg ctcgcgccgc tcgcgtcgcg gctgctcgac
     1081 gagctcgatc agaatacggc tccgttccgg ccgaactacg acgggacgaa gtcggagccg
     1141 gtcgtgctcc cggcgcagct gccgcacctg ctcgtcaacg gcgcgaccgg catcgccgtc
     1201 ggcatggcca ccaacatccc gccgcacaat ccggaagaag tgtgcagcgc cgccgtgcga
     1261 ctgctggatg ccctggtcga agagaagcag ctttcgtcgc gcgagctctg ccgcacgatc
     1321 aagggccccg atttccccac gggtggtgaa atcatctcga gcagcgagga gctcaagcag
     1381 gtctacgaaa ccggccaagg cacgattaag gtgcgcggca cctggcgcca aggcaaagac
     1441 ggcaaaaaca gcaagaccgt cgaaatcacg agcattccct acgccgtgaa caagtcgacg
     1501 ctcgtcgagc gcatcgccga ggtcgcggtc tcgcgcaagc tccccatgct gctcgacgtg
     1561 cgcgacgtct cgaccgacga cgtctgcatc gagctcgagc tcaagaagga agccgacgag
     1621 aagctcgtct tcgcctacct ctacaagaac acgccgctcc agtcgggctt ctcggtcaac
     1681 atgacgtgcc tcgtgccgac cgagcaggtc gacgtgggtc gccccgagcg cctcgatctg
     1741 cagtcgatgc tctggcattt cctgcatttc cggctcgagg tcgtcacgaa gcgcctgcag
     1801 aacgagctcg acgggctcga gcggcgcatg cacatcctcg aaggcttcgc gaaggtcttc
     1861 gacgcgctcg acgagatcat caagctcatc cgcaaatccg agggcaaagc cgacgccgcc
     1921 aaaaccatca tggcgaagtt cgacctcgac gcggagcaga cggacgcgat cctcgagctc
     1981 aagctctacc gcctcgcgcg gctcgaaatc ctcgtcatca agaaggagct cgacgagaag
     2041 cgcaagcgcg ccaaggaaat caaggcgctg ctcacggccg ccgcgaccaa ggggcgctgg
     2101 gccatcgtgc gcaaggagct cgaagcgctc ctcggcagct tcggcaagaa cggcaaacgc
     2161 cgcacgctgc tcgtcgagac gggcggcgag gtcgagttca cggacgagga cctcatcgtc
     2221 gccgaagacg cctacgtgct cctcacgacg gacggctgga tcaagcgcca aaaagagatc
     2281 aaggacacgc agagcacgcg
//
LOCUS       DATIML010000073         3717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3190650, whole genome shotgun sequence.
ACCESSION   DATIML010000073 DATIML010000000
VERSION     DATIML010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3717
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3190650"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(146..1585)
                     /locus_tag="VLJ38_01230"
     CDS             complement(146..1585)
                     /locus_tag="VLJ38_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSU38146.1"
                     /translation="MHERVNSTAISPARRPAGLFFRLFRARALRTLALTAAAFAGGAV
                     TSSLARARSERQSPYAMMDQLARVLVWIENEYVDPVDRAKLIEGGIKGMVAELDPHSS
                     YMAPEDYGVFQGDTEGHFGGIGVEVDFATDSVIVIAPIEGSPAELAGVRSGDRIVAID
                     GQMIRDRSPAELVRTMRGVPGSRVLITVRREGVDHLLYFTLVRRIVTVTSISSKLMEG
                     KIAYVRVKTFQSGTHAELLAHLANLRARAGGAFAGIVLDLRNNPGGLVNEASAVADEF
                     LDGGVIYTTRRRGQVVDEVRADAEGVLRRGPAVVLVNEFSASAAELVAGALHDQHRAS
                     LVGAPTFGKGSVQTIVDLPGGAGLRLTTLRYYTPSGQAIQARGVTPDVLVGGAPGDYG
                     IVREQNLDNHLPAVEGALTETPPPVLTPPTGAAAGKGPKTTEDVDHGVLRDVPADPRG
                     GPDQALATAYAMVLKAAATPNAPARPAPH"
     gene            1688..1915
                     /locus_tag="VLJ38_01235"
     CDS             1688..1915
                     /locus_tag="VLJ38_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04563 family protein"
                     /protein_id="HSU38147.1"
                     /translation="MADNENKSTGSDKRKQSLYFPESMLQEIKDEAARLDRSLSWVVQ
                     RAWKMARMEIKKIPSVNDIGEEEEEEGTTPA"
     gene            1980..2834
                     /locus_tag="VLJ38_01240"
     CDS             1980..2834
                     /locus_tag="VLJ38_01240"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU38148.1"
                     /translation="MRADDGTPIYVRRATGATPTTALFCDGIACDGFVWKYLWEDLRE
                     RVSVAHFHYRGHGRSGAPRNEDRIDVAAHAADADSVRRALGDPPVVLIGHSFGTQVAL
                     ETYRRRPEGVRALVLVCGSFGRVTYTFKGSDMLAGVLPDLLSFVTRHPQLGRALWSHV
                     PPKWALAAARLTGDVDPSRVNPDDVAPYFEHVIHLDFALFLRMLRAAGEHSAEDLLPN
                     VHVPVLVVAGELDSFTPPAVSRAMAEAIPGAELALCGGGSHLLPLERRDEIKRVVSEF
                     LVRRLPDV"
     gene            complement(2892..>3717)
                     /locus_tag="VLJ38_01245"
     CDS             complement(2892..>3717)
                     /locus_tag="VLJ38_01245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38149.1"
                     /translation="CAESGERLCTELEWERACKGPGGDRYPTGDAWDARCGAEPSRCE
                     SGFATLGMGAAAGEWTASDIAPGTPRSLASVRGAAADAPAEDHRCAARHGLLASAKDP
                     HVGFRCCAGPPNARMLPEPTLGDAYAKVHLGPERLVELLKSEPVTRELAKDVKFFREP
                     DSAETVVSRGPGDRKGFSFTVSPLHWNPVPGADLLVLTGRSGENTSFVVAYFTLADNS
                     YKLAASFVMKNEPGPVALAYSDDIRPRLHFSTCWGCPGETGKILFRKPERIAIVEP"
BASE COUNT          557 a         1244 c         1296 g          620 t
ORIGIN      
        1 cccgcgtttt cgacggacgt ctcggccgag ggcaacaacg acaagagcac gctcgacaag
       61 gacgtgctcg gcgtagtgac ggcttcgttc ggactcaagt gacggggaat gccggcggtg
      121 ccgcccggcg ccgtcgcgca gaggctcaat gcggagcggg ccgagcgggg gcgttcggcg
      181 tcgccgcggc tttgagcacc atcgcgtacg ccgtggcgag cgcttggtcg ggcccgccgc
      241 gcggatcggc gggaacgtcg cgcagaacgc cgtgatcgac gtcctcggtg gttttgggcc
      301 ctttgccggc tgcggcgccg gtcggaggag tgagcacggg cggcggcgtt tccgtgagcg
      361 cgccttcgac ggcgggcagg tgattgtcga ggttttgctc gcgcacgatg ccgtagtcgc
      421 cgggcgctcc gcccacgagc acgtcgggcg tgacgccgcg tgcctggatg gcttggccgc
      481 tcggcgtgta atagcggagc gtcgtcaggc gcaggcccgc gccgcccggc agatcgacga
      541 tcgtctgcac ggagcccttg ccgaaagtgg gagcgccgac gaggctcgcg cggtgctggt
      601 cgtgaagcgc accggcgacg agctccgccg cgctcgcgct aaattcgttg acgagcacca
      661 ccgcgggccc gcgtcgcaac acgccttccg cgtcggcgcg cacttcgtcg acgacctggc
      721 cgcgccggcg cgtcgtgtag atgaccccgc cgtcgagaaa ctcgtcggcg acggcgctcg
      781 cttcgttgac gagaccgccg gggttgttgc gcaggtcgag cacgatgccc gcgaatgcgc
      841 cgcctgcacg cgccctgagg ttcgcgaggt gcgcgaggag ctcggcgtga gtgccactct
      901 ggaaggtttt cacgcgcacg tacgcgattt tcccttccat cagcttgctc gaaatgctgg
      961 tgaccgtgac gatgcgccgc acgagcgtga agtagagcag gtggtccacg ccctcgcgtc
     1021 gaaccgtgat gagcacgcgg ctgcccggca cgccgcgcat cgtccgcacg agctcggccg
     1081 ggctcctgtc gcgaatcatc tgcccgtcaa tcgccacgat gcgatctccc gagcgcacgc
     1141 ccgcgagctc cgccggtgag ccctcgatcg gcgcgatcac gatcaccgag tccgtcgcga
     1201 agtcgacttc gacaccgatg ccgccgaagt gaccctccgt gtcgccctga aacacgccgt
     1261 agtcctcagg cgccatgtag gacgagtgcg gatcgagctc ggcgaccatc cctttgatgc
     1321 cgccttcgat gagcttcgcg cggtcgaccg ggtccacgta ttcgttctcg atccagacga
     1381 gcacccgggc gagctgatcc atcatcgcgt aagggctctg ccgctcgctc cgcgcgcgcg
     1441 cgaggctcga cgtgacggcg ccgccggcga aggccgcggc ggtcagcgcg agcgtgcgca
     1501 gcgcccgcgc gcggaaaagc cggaaaaaaa ggcccgcggg ccgtcgtgct ggcgaaatcg
     1561 ccgtggagtt tacgcgctcg tgcataggga ggccttcacg ttactctgtt gatctccgtc
     1621 aggtcggggt gctaactagg taagaaataa gagggctttc gcccaccctt gccccaagag
     1681 gtttcagttg gccgacaacg agaacaagtc aaccgggagc gacaagcgga agcaaagcct
     1741 gtacttcccc gagtcgatgc tgcaggagat caaggacgag gccgctcgtc tcgaccgttc
     1801 gctctcctgg gtcgtccagc gcgcctggaa gatggcccgc atggagatca agaaaatccc
     1861 cagtgttaac gacatcgggg aagaagagga agaggaaggc acgacgcctg cctgattcgt
     1921 ccggctctcc tgcgggggcg gattttgcac tggcagactg gcgcggcgac gaagctcatg
     1981 tgcgtgccga tgacggcacg cccatctacg ttcgccgcgc caccggtgcc acgccgacga
     2041 cggcgctctt ctgcgacggt atcgcgtgcg acgggttcgt ctggaagtac ctgtgggaag
     2101 atctgcgcga gcgggtgtcg gtcgcgcatt tccactatcg ggggcacggg cgcagcggcg
     2161 cgccccggaa tgaagatcgc atcgacgtgg cggcgcacgc ggccgatgcc gactctgtgc
     2221 ggcgggcact cggcgatcct ccggtcgtgc tcatcgggca ctcgttcggc acgcaggtag
     2281 cgctcgaaac gtatcgccgg cgtccggagg gcgtgcgcgc gctcgtgctc gtgtgcggca
     2341 gcttcggtcg tgtcacgtac accttcaagg gctcggacat gctcgccggg gtgttgcccg
     2401 acctgctctc gttcgtgacg cggcacccgc agctcggtcg cgcgctctgg tcgcacgtcc
     2461 cgcccaaatg ggcgctcgcc gcggcccggc tcacgggtga cgtcgacccc tcgcgcgtca
     2521 accccgacga cgtcgccccg tacttcgaac acgtcattca cctcgatttt gcgcttttct
     2581 tgcgcatgct gcgcgccgcc ggcgagcact cggccgagga tcttttgccg aacgtgcacg
     2641 tgccggtgct cgtcgtcgcg ggcgagctcg attcgttcac gccgcccgcc gtatcccgcg
     2701 ccatggcaga agcgatcccg ggcgcggagc tcgcgctctg tggcggcggc tcgcaccttt
     2761 tgccgctcga gcgccgcgac gagatcaagc gcgtcgtcag cgaatttctc gtgcgccgtt
     2821 tgccggacgt ctgaccgtac gctcgcgttg gcgatcgaga gctggccgag ccgcgactgg
     2881 tcgcgtcgag gctatggttc gacgatcgcg atgcgttccg gcttgcgaaa gaggatcttg
     2941 cctgtttcgc cagggcagcc ccagcacgtg ctgaagtgca ggcgcgggcg aatgtcgtcg
     3001 ctgtaggcga gggcgaccgg gccaggctcg ttcttcatca cgaagcttgc ggcaagtttg
     3061 tagctgttgt cggcgagcgt gaagtacgcg acgacgaacg acgtattttc gcccgagcgc
     3121 cccgtgagca cgagcagatc ggcgcccggc acggggttcc agtgcagggg cgacaccgtg
     3181 aacgagaacc ctttgcgatc gcccggcccg cgggagacga cggtttcggc cgaatccggc
     3241 tcacggaaga atttcacgtc cttcgcgagc tcgcgcgtga ccggctcgga tttgagcagt
     3301 tcgacgaggc gctcggggcc gaggtggacc ttcgcgtaag cgtcgccgag cgtgggctcg
     3361 gggagcatgc gcgcgttggg cggccccgcg cagcagcgga aaccgacgtg cggatccttg
     3421 gcgctcgcca gaagaccgtg gcgcgcggcg cagcgatgat cttcggcggg tgcgtcggct
     3481 gcggcgccgc gcacggacgc gagtgatcgc ggcgtgccgg gcgcgatgtc gctcgccgtc
     3541 cactccccgg cggccgcccc catcccgagc gtcgcaaagc cgctctcgca gcgcgacggt
     3601 tccgcgccgc agcgcgcgtc ccaggcatcg cccgtggggt accgatcgcc gccgggtccc
     3661 ttgcacgccc gttcccactc gagctcggtg cagaggcgct cgccgctttc ggcgcac
//
LOCUS       DATIML010000074         1500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4056363, whole genome shotgun sequence.
ACCESSION   DATIML010000074 DATIML010000000
VERSION     DATIML010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4056363"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1232
                     /locus_tag="VLJ38_01250"
     CDS             <1..1232
                     /locus_tag="VLJ38_01250"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSU38150.1"
                     /translation="YPSRAAHGEFRRDLGAVTSHVACGANGACKLTASTSLLSTDSRF
                     DDPESELGLGTTELDLRGRRVEQAFAAELRLGDKVTLVPTLHAAVEDLWIDTLEQAGL
                     RARRLFSRAALGAHVALARGVALHGLVSGECHGTSASGDVPWSFAAPHQADLGLCDEF
                     EPSGRVSLELGESGLKFLANLGRYARVPTLGELYGTSGAVRGNANLVPETGVTLDAGV
                     RALGSASGAALLDGSYLDLFGFARVASDLVNYQRTGRGYVAPYNVDRARILGLEVLAG
                     WRPLSFLLLELAGTLQDPRNTSPNRAANDYLQYRPRLVTTPRVEASFKKPMRGVERAK
                     LTALYYFEAERYADAAGLVVIPAQQSLDFEGELAVLDDHLALRVRVSNVLNQPRADLI
                     GYPLPGRAGYFTLEAKW"
     gene            1229..>1500
                     /locus_tag="VLJ38_01255"
     CDS             1229..>1500
                     /locus_tag="VLJ38_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38151.1"
                     /translation="MTGRLWLFLGATLACSACGVPAPPSSTGGVHVASNAGCPGAIAA
                     VSSGSDYASTNVSVLSTAGHLLSESIISSGSAPPGLTTALSGDVVLP"
BASE COUNT          203 a          521 c          519 g          257 t
ORIGIN      
        1 tctatccgag ccgcgcggcg cacggcgagt tccgtcgcga tctcggcgcc gtcacgtcgc
       61 acgtcgcgtg cggcgcgaac ggcgcgtgca agctcacggc gagcacgtcg ctgctctcga
      121 ccgactcgag gttcgacgac ccggagagcg agctcgggct cggcacgacc gagctcgatt
      181 tgcgcggcag gcgcgtcgag caggcgttcg cggcagagct gcggctcggg gacaaagtga
      241 cgctcgtccc gacgctccac gccgctgtcg aggacttgtg gatcgacacg ctcgagcagg
      301 cggggctcag ggcgcggcgg ctgttctcgc gcgcggcgct cggcgcccac gtcgccctgg
      361 cgcgcggtgt cgcgctgcac ggcctcgtga gcggtgagtg ccacgggact tcggcgagcg
      421 gtgacgtacc ctggtcgttc gccgctccgc accaagcgga cctggggctc tgcgacgagt
      481 tcgagccgag cggacgcgtt tcgctcgagc tcggggagag cgggctcaaa tttctcgcga
      541 acctcggccg ctacgcgcgc gtaccgacgc tcggtgagct ctacggcacc tcgggcgctg
      601 tgcgcggcaa cgcgaacctc gtgcccgaaa caggcgtcac actcgacgcc ggggtgcgcg
      661 ctctcggttc ggcgagcggg gccgcgctgc tcgacggcag ttacctcgat ctgttcgggt
      721 tcgcgcgcgt ggcgagcgat ctcgtcaact accagcgcac ggggcgcggc tacgtcgctc
      781 cctacaacgt cgaccgcgcc cgcatcttgg gactcgaagt cctcgctggc tggcgcccgc
      841 tttcgttcct cttgctcgag ctcgccggta cgctgcaaga cccgcgcaat acgtcgccga
      901 accgcgccgc gaacgactac ttgcaatatc gcccgcggct cgtcaccacg ccgcgcgtcg
      961 aggcgagctt caaaaagccc atgcgcggcg tcgagcgcgc caagctcacg gcgctctatt
     1021 atttcgaggc ggagcgctac gccgacgccg ccgggctcgt cgtcattccg gcgcagcagt
     1081 cgctcgactt cgaaggtgag ctcgccgtcc tggacgatca cctcgcgctc cgggtccgtg
     1141 tctcgaacgt gctcaatcaa ccgcgcgccg atctcatcgg ttatccgctg ccgggacgag
     1201 cgggctattt cacgctggag gccaagtggt gactggacga ttgtggctgt ttttgggtgc
     1261 gacgctcgcg tgctcggctt gcggcgttcc ggcgccgccg agctcgacgg gcggcgtgca
     1321 cgtggcatcg aacgccggct gccccggcgc tatcgcggcc gtgagcagcg gcagcgatta
     1381 tgcgagcacg aacgtttcgg tgctctcgac ggcaggtcac ctgctttcgg agtcgatcat
     1441 ctcgagtggc tcggcgccgc ccggtctcac gaccgcgctg tcgggtgatg tcgtgctgcc
//
LOCUS       DATIML010000075         4028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2613421, whole genome shotgun sequence.
ACCESSION   DATIML010000075 DATIML010000000
VERSION     DATIML010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2613421"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VLJ38_01260"
     CDS             complement(<1..339)
                     /locus_tag="VLJ38_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38152.1"
                     /translation="MSVRADKQRAALAPARVAEIKRKHGVATKLVVGSAHDELEHEAD
                     RVATAVVGHGEKRSVPASAGGDGPGAPAPAIQPKIELAKPRPILDDEREKKHDEPTVQ
                     RHGGAGAFEAG"
     gene            complement(336..2294)
                     /locus_tag="VLJ38_01265"
     CDS             complement(336..2294)
                     /locus_tag="VLJ38_01265"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU38153.1"
                     /translation="MDAWGDDSRRVLALELSSLKQLCHERSGATSGAEATTIETSASL
                     RAERDRTAARMDRQPPLDFLRDAFALDDFESRVLVLACAAQLDAGFLPLFSALGAEKS
                     RLPTPALALELFASTPAERATALAAFLPTSPLRRHRLVEFGEHPSQVLRPLSVDERLL
                     AFVQALPTEDARLEPLLEPLAPALLTDAERVLAVELTALFTTVRKTARPVVNLVGGPA
                     QRRIARAALEALNASIAELVVSRLLPDELDGTLRLLAREATLTRRAYYVDATGRDVRA
                     VCERLDTIVIVGSEEPLPLTRPVVVLSCPRLTAPERVDLWRRTLGEHASKLNGTVEGV
                     AQQFELEADAIAQLGATLVARAAAHGGEIGAAELWRSCRERAARAVDGRATRIEPARG
                     FDDLVLPSESLEQLRAIEGQVRARGRVLDEWGFGAKLVRGRGTAVLFAGPSGTGKTLA
                     AEVLAHELGLDLLRVELAGVVDKYIGETEKNLRRVFEAAQASGAVLFFDEADALFAAR
                     TDVKSSHDRYANAEVNYLLQLMEDYRGVAILATNRRAALDRAFLRRLRFVVDFPHPDA
                     TLRRGIWERVFPQNMPRDGLELDALARLDVTGGSIRTIALNAALAAAHAGEPVRMSHV
                     MTAARREYAKLDKLVTPAEFGVHRGSNR"
     gene            complement(2294..3472)
                     /locus_tag="VLJ38_01270"
     CDS             complement(2294..3472)
                     /locus_tag="VLJ38_01270"
                     /inference="COORDINATES: protein motif:HMM:NF025431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4255 domain-containing protein"
                     /protein_id="HSU38154.1"
                     /translation="MASSAAIQGATSSLLALLGDRMQPPPALSTGSPVAGDNKRVNLF
                     LYKIQENAALRNQDAPDPRSASAPPLSLDLHYLLTVLGTTPEEELSAQQLLGEAMLVF
                     HDFGIIDPELPLVRSTGTVLDPVLADDGARLTISPNPLSLEDLTKIWTALAVPYRVSA
                     AYVVTVVQIRSRKVRYSAPPVRDRRLFVVPLRRPSVSDLTRKPPFDGMPPWVAEPGDA
                     LRVRGLHFRSPSTRVILGSSAALTPAIVSDTTLEFTLPPDATAGVQELSVVRDGADGP
                     PPIAKGSLRSNAVPLQVLPKLTSITPANVAPNGVLTLTLAAPVARDDDVSLLLGDVQI
                     PAEPHPSPTTSPTFALEAFASALNAGSYLVRVRVNGAESRLSVDPTTQVYTGPVVQVT
                     "
     gene            3763..>4028
                     /locus_tag="VLJ38_01275"
     CDS             3763..>4028
                     /locus_tag="VLJ38_01275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38155.1"
                     /translation="MPVTPTYPGVYVEELPSGVHTIVGVSTSTTAFIGYAPSGPILHA
                     TNVENFTEYSSIFGGLSLDGDLGHAVQQFFLNGGAEAVIVRVTSG"
BASE COUNT          601 a         1357 c         1433 g          637 t
ORIGIN      
        1 gcccgcctcg aacgcgcccg cgccgccgtg ccgctggacg gtcggctcgt catgcttctt
       61 ttcgcgctcg tcgtcgagaa ttgggcgcgg ctttgccagc tcgattttcg gctgtatcgc
      121 cggcgccggc gctccgggtc cgtcgccgcc ggcgctcgcc ggaacgcttc gcttctcgcc
      181 gtggcccacg accgccgtgg cgacgcgatc ggcctcgtgc tcgagctcgt cgtgcgcgga
      241 gcccaccacg agcttggtgg cgacgccgtg cttgcgtttg atttcggcga ctcgcgcggg
      301 tgcgagcgct gcccgctgct tgtccgcgcg aacgctcatc ggttcgagcc ccgatggacg
      361 ccgaattcgg ccggggtgac gagcttgtcg agcttcgcgt attcgcggcg cgcggcggtc
      421 atgacgtgcg acatgcgcac gggctcgccc gcgtgtgctg ccgccagcgc cgcgttgagc
      481 gcaatcgtgc ggatactgcc gccggtcacg tccagtcgcg cgagtgcgtc gagctcgagc
      541 ccgtcgcgcg gcatattttg cgggaagacg cgctcccaaa tgccgcgcct cagggtcgcg
      601 tcgggatgag gaaaatcgac gacgaagcgc agtcgacgca aaaacgcgcg atcgagcgcg
      661 gcgcgccgat tggtcgccag gatcgccacg ccgcgataat cctccatcag ctgcaagagg
      721 taattcacct cggcgttggc gtagcggtcg tggctcgatt tcacgtccgt gcgcgcggcg
      781 aagagcgcgt cggcttcgtc gaagaagagc acggcgccgc tcgcctgggc tgcctcgaaa
      841 acgcgccgca gattcttctc ggtctcgccg atgtatttgt cgacgacgcc cgccaactcg
      901 acgcgcaaga ggtcgagccc gagctcgtga gcgagcacct ccgcggcgag cgtcttgccc
      961 gtgccgctcg ggcccgcgaa caggacggcc gtgccgcgtc cgcgcacgag cttcgccccg
     1021 aagccccatt cgtcgagcac gcgtccgcgc gcgcgcacct ggccttcgat ggcgcgcagc
     1081 tgctcgagcg actcgctcgg taagaccagg tcgtcgaagc cgcgggccgg ctcgatgcgc
     1141 gtcgcgcgtc cgtcgaccgc tcgcgccgct cgttcgcggc agctccgcca gagctccgcc
     1201 gctccgatct cgccgccgtg cgccgccgcg cgcgcgacga gcgtcgcgcc gagctgcgcg
     1261 atcgcgtccg cctcgagttc gaactgctgc gcgacgccct ccacggtgcc gttgagctta
     1321 ctcgcgtgtt cgccgagcgt gcggcgccag aggtccacgc gctcgggcgc cgtcaggcgc
     1381 gggcagctga gcacgacgac cggtcgcgtc agcgggagcg gttcctcgct accgacgatc
     1441 acgatcgtgt cgagccgttc gcacaccgcg cgcacgtctc gacccgtcgc gtcgacgtag
     1501 taggctcggc gtgtgagcgt ggcctcgcgg gcgagcaagc gcagcgtgcc gtcgagctcg
     1561 tccggcagca ggcgactcac gacgagctcc gcgatgctcg cgttcagcgc ctcgagcgcc
     1621 gcccgggcga tacggcgctg cgctgggccg ccgaccaggt tcacgacggg ccgcgccgtc
     1681 ttgcgcaccg tcgtgaacag ggcggtaagc tcgacggcga gcacccgctc cgcgtccgtc
     1741 aagagcgcgg gcgcgagcgg ttccagcagc ggctcgaggc gcgcgtcctc cgtcggcagc
     1801 gcttggacga acgcaagcaa ccgctcgtcg accgagagcg ggcgcaggac ctgcgagggg
     1861 tgctcgccga actcgaccag ccggtgccgg cgcagcgggc tcgtcggtag gaacgcggcg
     1921 agcgccgtgg cgcgctcggc cggagtcgag gcgaagagtt cgagcgcgag cgccggcgtc
     1981 ggcagtcgcg atttttcggc gccgagcgcg gaaaacagcg gcaaaaaccc cgcgtcgagc
     2041 tgcgcggcgc acgcgagcac gagcactcgg ctctcgaaat cgtcgagcgc aaaagcgtcg
     2101 cgcaggaagt cgagtggcgg ctggcgatcc atgcgtgcgg cggtgcggtc ccgctctgcg
     2161 cggagcgacg cgctcgtctc gatcgtggtg gcctcagcgc cggacgtggc gcccgaacgt
     2221 tcgtggcaga gctgcttcaa gctcgatagc tcgagcgcca agacccgacg gctgtcgtcg
     2281 ccccaggcgt ccatcacgtc acctgaacca cggggcccgt gtaaacttgc gtcgtggggt
     2341 cgacgctgag cctactttcg gcgccgttga cgcggacgcg tacgaggtag cttccggcat
     2401 tcaacgccga ggcgaacgct tcgagcgcga acgtcgggct cgtcgtcggg ctcgggtgcg
     2461 gctcggcggg gatttgcacg tcgccgagca ggaggctcac gtcgtcgtcg cgcgcgacgg
     2521 gcgcggcgag cgtcagcgtg agcacgccgt tcggcgccac gttcgcaggc gtgatgctcg
     2581 tgagcttcgg caatacctgg agcggaacgg cgttcgaacg caggctgccc ttggcgatcg
     2641 gcggcggtcc gtcggctccg tcgcgaacga cgctgagctc ctgaacgcct gcggtcgcgt
     2701 ccggcggcag cgtgaactcg agggtcgtgt ccgaaacgat cgcgggcgtg agcgccgccg
     2761 acgagcccag tatgacgcgc gtggacggcg aacggaaatg gaggccacgc acgcgcaacg
     2821 cgtcgcctgg ctccgcgacc cacggcggca tgccgtcgaa cggcggcttg cgcgtcaggt
     2881 cgctcacgct cggacgccgc aaaggcacga cgaagagcct gcgatcgcgc accggcggag
     2941 cgctgtagcg aaccttccgg ctccggatct gcaccaccgt gactacgtac gcggcagata
     3001 ctcggtacgg tacggcgagc gccgtccaga tcttggtgag atcttcgagg ctcagcgggt
     3061 tcggcgagat ggtgagtcgc gcgccgtcgt cggcgagtac gggatcgagc accgtgcccg
     3121 tgctgcgcac gagcggaagc tccggatcga tgatgccgaa gtcgtgaaag acgagcatcg
     3181 cttcgccgag gagctgctgt gcactgagct cttcctccgg cgtcgtgccg agcacggtca
     3241 gcaagtagtg cagatcgagg gaaagcggcg gcgcgctcgc gctgcgcgga tcgggggcgt
     3301 cctgattgcg gagtgccgcg ttttcctgga ttttgtagag gaacaggttg acgcgcttgt
     3361 tgtcgcccgc gacgggcgaa ccggtcgaaa gcgccggcgg cggctgcatg cgatccccga
     3421 gtagcgcgag caacgaagac gttgcccctt gaatggctgc tgagctcgcc atcgcctccg
     3481 cgcaagagta cccccgagcg cgcgctcgtt ccaacgcaaa tccgtgacgt gcccagggcg
     3541 cgccagttcg ccgcgcgccc tgcgatgacc gctacgactc gtcgtgtacg agtcggcgct
     3601 gaaggaacgt tgcgcgcgtg gtcctttgtt ccgtcgagcg cttcgcgctt gacgagttgc
     3661 tttcagacga aagaggatgt cgtcgagagc gcgcggacgt acgccgcggg gacatgtcga
     3721 gagcagcgag acgacgcgag agctcgcgtc catggaggag tcatgccggt cacgccgacc
     3781 tatccaggcg tctacgtcga agagttgccg agtggcgttc acacgatcgt gggggtgtcg
     3841 acgtcgacca cggcgttcat cggctacgcg ccgagcggcc ccatcctgca cgcgaccaac
     3901 gtcgaaaatt tcaccgaata tagctcgatt ttcgggggat tgagcctcga cggcgacctc
     3961 ggtcacgcgg tgcagcagtt cttcttgaac ggcggcgccg aggcggtgat cgtgcgcgtg
     4021 acgagcgg
//
LOCUS       DATIML010000076         4484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3768364, whole genome shotgun sequence.
ACCESSION   DATIML010000076 DATIML010000000
VERSION     DATIML010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4484
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3768364"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            487..1608
                     /locus_tag="VLJ38_01280"
     CDS             487..1608
                     /locus_tag="VLJ38_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38156.1"
                     /translation="MPRDSLFGERIVWAGRPAVIRPSAFQRSLAFVSFFAAVITLCFA
                     LVVAIVLKAEFGPLLVFAFWCATMGLGILQGPRIVLAHSRYVVTDQHVIAIYGPIRRT
                     IERKAISFARIYWDESQPDAGDVELVRAVPTGALRRRLMLRLIGVRAPDRVWAIVRGA
                     ERLAPRGGADRPLTQRLDTDERVIWSAQPRQALKRFVPRGQREWALLAIAAALFAGGS
                     RMAIGALPTLRRVHEGGLQVGSFTFAVLALGMGSTILLLIGIGCYLVYDAIIRSGYLA
                     AYTRYLVTNKRVLIQRRTEELHLDRQKIYDVIEAPKGDGLHDVFLVLDGPRARAVAAS
                     GAFGEISRGPHLRPVFEAVEDAEGVSRILRGPPELPHAA"
     gene            complement(1632..2603)
                     /locus_tag="VLJ38_01285"
     CDS             complement(1632..2603)
                     /locus_tag="VLJ38_01285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38157.1"
                     /translation="MRRAALALGVFVGLASAALRVEGAPSLWQRAKNPGEARLLVALE
                     RRLDEMALAAREPDTAERIARAGVALIELARVDNPADPRLAFMMARVLLAADVNREVY
                     AERLLEHAVAELPVSPLLAKAWLELGLLRALRGDPAAAVDAESRALELALDPDQRAVA
                     FCRRAAAEAELQALTRAESDYRTAAEAARDPALQALARFGLGLVLERQGDLPSAYAVF
                     QQGLTIALPISAYATDELLELPGAFFSPSYDRFYVGALLAMTRARVERDPRARRIELE
                     QAVADWDAYLLAARADEVWVPNAKRHRERCVRELSRLPRARRKSTNP"
     gene            complement(2699..3673)
                     /locus_tag="VLJ38_01290"
     CDS             complement(2699..3673)
                     /locus_tag="VLJ38_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38158.1"
                     /translation="MPFWPATLSFGLPPPAELAAAAAAGVRAAACRPHAGRTDPTLWT
                     RARPPEVALSCRLLARATARLDHSPAAALELSRSAASFEPNALTAKLIEGRALLRLGR
                     VPEAWALLAPFAEEKSAPLDDAPSLFDVARTALAAGALEQAASAYRLLVPRAALLGSR
                     QAERTAVIEAASLALARGPKSLDEALGYLETARSIPLAGDHDLILALTALALDRAGRS
                     EQARAAAREAEGPWDLESELSQAERARVAETALSPSGELTPSPAAIRPSRIMLLDGEL
                     HAAIAELAWGRDEALRRAHWRAFLASSAGRGAWAEHARRALGRGGKGP"
     gene            complement(3734..>4484)
                     /locus_tag="VLJ38_01295"
     CDS             complement(3734..>4484)
                     /locus_tag="VLJ38_01295"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HSU38159.1"
                     /translation="TALLASAPRLVPLLRDTSALVGDSIKAGKSVMLEGAQGTLLDLD
                     HGTYPFVTSSSAVAGGASVGAGIGPNRINTVIGITKAYTTRVGAGPFPTELGNAEGDH
                     LREVGAEFGSVTGRPRRTGWLDLPALRYAARVNGFDGLALTKLDVLTGLSTLKVCVAY
                     DTPDGRVNDLPLDLLDRPELMKPVYVELEGWQEKLEGARVLDELPSAARAYIRFLEKE
                     TGAPVYLVSVGPRRSETIVLHNPFVGRAAAP"
BASE COUNT          686 a         1576 c         1576 g          646 t
ORIGIN      
        1 cgccgactcc gagctcgcaa acgccatcgc tcgcgccgtg cgggacgaaa tcgagcgaca
       61 gaacagcgag tatcggagct acgtgccgga ggcgcgccgt acgcccgagg tcgctctgct
      121 gccgaacggc cacgccgagt actttccaaa aggcgtgaag caccgttaca cgcgctagct
      181 ggggcgcagc gcagcccgac acgccccatg agtcttgaaa aaaccgattg cgaccggcag
      241 gaccgcttcg cgcaatttaa gtgcgagccc gcgagccgga cccctgcgcg ggacgcctgc
      301 atgccaggaa ctggccgtag attcggcacc ggcaccgagg cgcgctgcgc cgcgttgcgc
      361 tcagtctgga aacacgagtg cccgtggctt gcgcgcgcaa gaccggccgg cgagttcgtc
      421 ctggactaac gcgagaagca ggcgaatgct tgatggaacc gggcgcgtgc tcggtcgaga
      481 ccccccgtgc cccgcgattc cctatttggt gaacgcattg tttgggctgg caggccagcg
      541 gtcattcgac cctcagcgtt ccagcgctcg ctggcgttcg tctcgttctt cgcggcggtc
      601 atcacgctct gcttcgcgct cgtggtcgcg atcgtgctca aggcggagtt cggtccgctg
      661 ctcgtgttcg cgttctggtg tgcgacgatg gggctcggga tcctgcaagg gccccgtatc
      721 gtgctcgcgc attcgcggta cgtcgtgacc gaccagcacg tgatcgcgat ctacggaccc
      781 atccgccgca ccatcgagcg caaggcgata agcttcgccc gcatctactg ggacgagagt
      841 cagccggacg cgggcgacgt cgagctcgtg cgggctgtcc cgaccggcgc gctcaggcgg
      901 cgcttgatgc tccggctgat tggcgtgcgc gcgccggatc gcgtgtgggc gatcgtgcgc
      961 ggcgccgagc ggctcgcccc gcggggcgga gcggatcgcc cgctcacgca gcggctcgac
     1021 acggacgagc gcgtgatctg gtcggcccag ccgcgccagg ccctcaaacg tttcgtgccg
     1081 cgcggccagc gcgagtgggc gctcctggcc atcgcggcag cgctctttgc gggtggctcg
     1141 cgcatggcaa tcggcgccct gccgacgctc cggcgcgtgc acgaaggcgg ccttcaggtc
     1201 ggctcgttca ccttcgcggt gctcgccctc ggcatgggct ccacgatctt gctgctcatc
     1261 ggcatcggct gctacctcgt ctacgatgcc atcatccgca gcggttacct cgccgcctac
     1321 acgcgctacc tcgtgacgaa caagcgcgtc ttgattcagc gccgcacgga agagctgcac
     1381 ctcgaccgcc agaaaatcta cgacgtgatt gaggcgccca agggcgacgg cctgcacgac
     1441 gtgttcctcg tgctcgacgg accgcgcgcg cgcgccgtcg ccgcgagcgg cgcgttcggc
     1501 gaaatttcgc gcgggccgca cctgcgcccc gtgttcgagg cggtcgaaga cgcagaaggc
     1561 gtatcgcgca tcctgcgggg cccgccggag ctaccgcacg cagcctagcc cgaggcactc
     1621 gcgcgtcggg ctcagggatt cgtcgatttt cgacgcgcac gcggcaggcg cgagagctcc
     1681 cgcacacaac gttcccggtg cctcttcgcg ttcggcaccc agacctcgtc ggcgcgcgca
     1741 gcgagcaggt acgcgtccca atccgccacg gcctgctcga gctcgatgcg ccgcgcccgc
     1801 gggtcccgct cgacgcgcgc gcgggtcatc gccagcaacg cgccgacata aaagcggtcg
     1861 tacgaggggg agaagaacgc ccccggcagc tcgagcagtt cgtcggtcgc atacgccgaa
     1921 atcgggagcg cgatggtgag cccctgctgg aagacggcat acgccgacgg cagatcgcct
     1981 tgacgttcga gcacgagccc gaggccgaaa cgcgcgagcg cctggagcgc cgggtcgcgg
     2041 gcggcctcgg ctgccgtgcg atagtccgac tcggcgcgag ttagtgcttg gagttccgct
     2101 tccgcagccg cacgacggca gaacgcgacc gcgcgctgat ccggatcgag ggcaagctcg
     2161 agcgcacggc tctcggcgtc cacggcagcc gccggatcgc cgcgcagcgc gcgcaagagg
     2221 ccgagctcga gccaggcctt ggcgagcagc gggctcacgg ggagctcggc gacggcgtgc
     2281 tcgagcagcc gctccgcgta gacttccctg tttacgtcgg cggcgagcag cacgcgcgcc
     2341 atcatgaacg cgagccgtgg atcggccgga ttgtcgacgc gtgcgagctc gatcagcgcg
     2401 acgccggcgc gcgcgatgcg ctccgccgtg tccggttcac gcgcggcgag cgccatttcg
     2461 tccaggcgtc gctccagagc gacgagcagc cgcgcttcgc ccgggttctt cgcacgctgc
     2521 cacagagacg gcgcgccctc gacgcgcagc gcagccgagg cgagccccac gaagactccg
     2581 agcgcgagcg ccgcgcgtcg caagctaggg ccgcgtcccg tcagtaacga tgcatttgcg
     2641 gcggcgctag ccacgcgcga agccgcgtga gtgcaatcgc aatttttggg acacagcact
     2701 acggcccttt gccgcccctg ccgagcgcgc gccgggcgtg ctcggcccaa gctccgcgtc
     2761 cggcactgct ggcgaggaac gctcgccaat gcgcgcgccg caacgcttcg tcccggcccc
     2821 acgccagctc ggcgatagcc gcgtgaagct cgccatcgag cagcatgatg cggctcggcc
     2881 ggatcgccgc cggcgagggc gtaagctcgc cgctcgggct cagcgccgtc tcggcgacac
     2941 gtgcccgttc cgcttggctg agctcgctct cgagatccca aggcccctcg gcctcgcgtg
     3001 cggcggcccg cgcttgctcg ctcctgccgg cgcgatcgag cgcgagcgcc gtgagcgcga
     3061 gaatgaggtc gtgatcacca gcgagcggga tggaacgcgc cgtttcgagg tagccgagcg
     3121 cctcgtcgag acttttgggc ccgcgagcga gcgcgagact tgcggcttca atcacggccg
     3181 tacgctctgc ttgacgcgag ccgagcaacg cggcgcgcgg cacgagcagg cgataggcgc
     3241 tcgccgcttg ctcgagcgca ccggcggcga gcgcggtccg cgcgacgtcg aagagcgacg
     3301 gagcgtcatc gagcggcgcg gatttttcct cggcgaaggg cgcgagcagc gcccaagcct
     3361 cgggcacgcg gccgagccgg agcagcgcgc gaccttcgat gagcttcgcc gtcagcgcgt
     3421 tcggctcgaa cgatgccgcc gaacgcgaaa gctcgagggc ggcggcagga ctgtggtcga
     3481 gccgggccgt cgcgcgcgcg agcaagcggc acgatagcgc gacctctggc ggccgcgctc
     3541 gggtccagag cgtcggatcc gtgcggccgg cgtggggacg acaggcggca gcgcgcacgc
     3601 ccgccgctgc ggcagcggcg agctctgcag gcggcggcag accgaaggac aacgtcgcgg
     3661 gccagaaggg catgcgcggc attcagctta cacccggcgc tggcgccggg ccggcctcac
     3721 gtgaatcgaa ggctcaaggc gcggcggcgc gaccgacgaa cggattgtgg agcacgattg
     3781 tctccgaacg gcgagggccg acgctcacga ggtagactgg cgctccggtc tccttttcga
     3841 ggaagcggat gtacgcgcgc gccgcgctcg gcagctcatc gagcacgcgg gcaccttcga
     3901 gcttttcctg ccagccttcg agctcgacgt acacgggctt catcagctcc ggccggtcca
     3961 gcagatcgag cggcaaatcg ttcacgcggc cgtcgggggt gtcgtacgcc acgcacacct
     4021 tgagcgtcga gagacccgtg aggacgtcga gcttggtgag cgcgagaccg tcgaaaccgt
     4081 tgacgcgcgc ggcgtaacgc agcgccggca agtcgagcca gccggtgcgc cgcggccggc
     4141 cggtgacgga gccgaactcg gcgccgacct cgcgcaaatg gtcgccctcg gcgttgccga
     4201 gctcggtcgg gaacgggccc gcgcccacac gcgtcgtgta cgccttggtg atgccgatca
     4261 ccgtattgat gcggttcgga ccgatgcctg cgccgaccga cgccccgccc gccacggccg
     4321 agctcgacgt gacgaacggg tacgtcccgt gatcgaggtc gagcagcgtg ccctgggcgc
     4381 cttcgagcat cacgctcttg cccgctttga tgctgtcgcc cacgagcgcc gacgtgtcgc
     4441 gcaggagcgg aacgaggcgc ggcgccgacg cgagcagcgc agtc
//
LOCUS       DATIML010000077         2183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2036050, whole genome shotgun sequence.
ACCESSION   DATIML010000077 DATIML010000000
VERSION     DATIML010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2036050"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1153)
                     /locus_tag="VLJ38_01300"
     CDS             complement(<1..1153)
                     /locus_tag="VLJ38_01300"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU38160.1"
                     /translation="MDFDIVVVGARCAGASFATFMARAGARVLLLDQARLPSDQPLST
                     HTVRPAGMDVLDELGVGARVRSAPPVRRLRLQSGSASVVAVYPGGRAEYCPRRLRLDG
                     LLLEVARAAGVELSDESRVCGLLEEHGRVCGVRFRNCGQERTARAGLVVGADGRHSLV
                     ARAVRAEEYLAYDAPRAMYWSYYPAPACWKDDPDYAFDMYFGHVGRSMRLIFQTDDDQ
                     LLIGSMPELPDLTAWKANPAAKLASDLAYDPLTAALVAGQLPTERVRAVTNARYFFRR
                     AVGAGWALLGDAGIHKEFVTGDGISEALLQARALAIALQHADEGALARWWHERDVLAL
                     PLYCFGRDQGRAGPVERLDEMVFDAVAGDAKLCERITLGLDHRISPYDAL"
     gene            complement(1203..1919)
                     /locus_tag="VLJ38_01305"
     CDS             complement(1203..1919)
                     /locus_tag="VLJ38_01305"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSU38161.1"
                     /translation="MNKLDFGTILEAAHAATSLDAFEQTTLPLLRQHIACDQLFFVVS
                     SGIRGRALGFDERVRQATAGRFSHYARELEPFRRAAASNGGVGVDLEFFGSAALQRTA
                     HYREIMRPHSGQSTLLGYLSFQGEALGGIVFGRSTPGFLEAEQRLLRETLPALSLARA
                     AFRPRSQGRAREILPAVAERLSPRERDVLSYLVLGYTNAEIALACGTSFRTVRNQLTS
                     LFRKVGATTRAEAVSLSLRQ"
     gene            complement(1965..>2183)
                     /locus_tag="VLJ38_01310"
     CDS             complement(1965..>2183)
                     /locus_tag="VLJ38_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38162.1"
                     /translation="TKAWQYRAEGVESPTLGDVERLANGNVFVTFSNAGVMQEVDRTG
                     TVVQAFVSSDASFGYADFRESLYGPPPR"
BASE COUNT          374 a          738 c          735 g          336 t
ORIGIN      
        1 gtagtgcatc gtacggcgag atgcggtggt cgagcccgag cgtgatgcgt tcacagagtt
       61 ttgcgtcgcc ggcgacggcg tcgaaaacca tctcgtccag acgttcgaca ggtccggcgc
      121 ggccttggtc gcgcccgaaa caatagagcg gcagcgccaa cacgtcgcgc tcgtgccacc
      181 agcgagccag ggcaccctcg tccgcgtgtt ggagggcgat cgccagcgct cgcgcttgca
      241 gcagggcctc gctgatccca tctcccgtca cgaactcctt gtggattccg gcgtcgccga
      301 gcagcgccca gcccgcgccg actgcgcgcc gaaagaaata gcgcgcgttg gtgacggcgc
      361 gtacgcgttc cgtaggcagc tgtcctgcga cgagcgctgc cgtcagcggg tcgtaagcca
      421 gatcggacgc gagctttgcg gccgggttcg ccttccaggc cgttagatcg ggcagctcgg
      481 gcatgctgcc gatgagcagc tgatcgtcgt cggtttgaaa gatgaggcgc atcgagcgac
      541 cgacgtgccc aaagtacatg tcgaacgcgt agtctggatc gtccttccag cacgcaggcg
      601 cggggtaata gctccagtac atcgcgcgcg gcgcgtcgta ggcgaggtac tcctcggcgc
      661 gcacggcacg cgctaccagc gagtgccgtc cgtcggcacc cacgaccaga ccggcgcgag
      721 cagtgcgctc ttgcccgcag ttccggaagc gcacgccgca cacgcgtccg tgctcctcga
      781 gcaggccgca tacccggctc tcgtccgaaa gctcgacgcc ggcagcccgc gcgacctcga
      841 gcagcaagcc gtcgaggcgc agacgtctgg ggcagtactc ggctcgacca ccgggataca
      901 ccgcgaccac gctggccgag ccgctctgca agcgcaggcg gcgcacgggc ggcgccgacc
      961 gaacgcgtgc gccgaccccg agctcgtcga gcacgtccat gcccgccggg cgaaccgtgt
     1021 gcgtcgagag cggctggtcg ctcggcaggc gcgcttggtc gaggagcaac acgcgcgcgc
     1081 cggcgcgcgc catgaaggtc gcgaagctcg cgccggcaca gcgcgcgccg acgacgacga
     1141 tgtcgaaatc catgccgcaa aacctgcgcc tcacgagcgg gtttcgcgat gggacactcg
     1201 tcctattgcc gcagactcag cgagaccgct tcggcacgcg tcgtcgcgcc tacttttcgg
     1261 aacaggctcg tgagctgatt gcgaaccgtg cgaaacgacg tgccgcaggc gagcgcgatc
     1321 tccgcgttgg tgtagccgag gacgaggtag ctcagcacgt cgcgctcgcg tggagacaac
     1381 cgttcggcga cggctggcag gatctccctc gcgcgcccct gtgagcgcgg ccggaacgcc
     1441 gctcgagcga gcgacagcgc gggcaacgtt tcgcggagca agcgctgttc tgcctcgagg
     1501 aaccccggcg tcgagcgccc gaacacgatg ccgccgagcg cctcgccttg aaacgacagg
     1561 tagccgagca acgtgctctg ccccgaatgc gggcgcatga tctcccgata gtgcgccgtg
     1621 cgctgcaagg ccgctgaacc gaagaactcg agatcgacgc cgacgccgcc gttcgacgct
     1681 gcggcgcgtc ggaacggctc gagctcgcgc gcgtagtgag aaaatcgacc tgcggtcgcc
     1741 tggcgtactc gttcatcgaa gccgagagcg cgtccgcgga tcccgctgct cacgacgaag
     1801 aagagctggt cgcacgcgat gtgctgccgg agcagcggta gcgtggtctg ctcgaacgcg
     1861 tcgaggctcg tcgcggcgtg agccgcctcg agaatagtcc cgaagtcgag cttgttcacg
     1921 ctctagagtc tacgcgcgcc tcacgtccgc gcctcggttt tttttcagcg tggcggcgga
     1981 ccatagaggg attcgcgaaa gtcggcgtaa ccgaaagacg cgtccgagct cacgaaggct
     2041 tggacgaccg tgcccgtccg gtcgacctct tgcatgactc cggcgttcga gaaggtcacg
     2101 aagacattgc cgttcgcgag gcgctcgacg tcgccgagcg taggactctc gacgccctcg
     2161 gctcgatatt gccaagcctt ggt
//
LOCUS       DATIML010000078         2890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2614458, whole genome shotgun sequence.
ACCESSION   DATIML010000078 DATIML010000000
VERSION     DATIML010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2614458"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..258
                     /locus_tag="VLJ38_01315"
     CDS             109..258
                     /locus_tag="VLJ38_01315"
                     /inference="COORDINATES: protein motif:HMM:NF023180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 domain-containing protein"
                     /protein_id="HSU38163.1"
                     /translation="MLTLLLILLLIAAVFSVPAWPYSRGWGYYPSGGLGIVALVLLLL
                     LFMHR"
     gene            complement(301..924)
                     /locus_tag="VLJ38_01320"
     CDS             complement(301..924)
                     /locus_tag="VLJ38_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSU38164.1"
                     /translation="MILIGQFDSPFVRRVGIALELYGVPYEHRPWSTWGDADKLAVYN
                     PLRRVPTLLLEDGECLIESSAILDALDEVAGERALLPRQGPLRRQALFVTALATGLAD
                     KAVSLVYERKLHPEISAAWIDRCRAQIGGVLARLEVLRTERKTRYWFADTLWHADIAV
                     ACALRFLLESSPGAFELASFPALASHAAACEALPVFQKISQPFFVRT"
     gene            complement(921..1673)
                     /locus_tag="VLJ38_01325"
     CDS             complement(921..1673)
                     /locus_tag="VLJ38_01325"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HSU38165.1"
                     /translation="MRRAIVLEHVVHEGPARVGSALRRAGFELDRRALYAGAAVPTTL
                     DGAELLVVMGGPMGVADVGDARYPFLAAELDLLRAAVARDFPTLGICLGAQLLAAAAG
                     ARVYPNVTGDPPRPTREVGWGAVHFVRSSSEEPALEGLDAAELVLHWHGDTFDLPPGA
                     TLLASTLSCPQQMFRLGRSQYGLQFHVELDESDVDAWLAADADYVRGALGADGVERIR
                     RDSARYLPRFRERGDRWLDRLISVMLPPRGNG"
     gene            complement(1724..2110)
                     /locus_tag="VLJ38_01330"
     CDS             complement(1724..2110)
                     /locus_tag="VLJ38_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38166.1"
                     /translation="MASFRSRSTEASQAAAERRQREDRAPRLIAEAPQLATLKLEIEE
                     MRQGASVPETVHVKHVAVAHAPALFDLPCLDSTCSGGGHDVTNQVLAALRSRSTKFQG
                     EHSCNGMTRTAACTRVLRYVAIATYK"
     gene            complement(2116..2481)
                     /locus_tag="VLJ38_01335"
     CDS             complement(2116..2481)
                     /locus_tag="VLJ38_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU38167.1"
                     /translation="MNAHDEHPTKPENDAAAERRQGPRLTINKQFPSFDDFVREYVTN
                     VSGSGAFVRTDSPLPIGTEVNLKFSVVLEGVETIEGVGVVVRVETQPAGMGVAFKELR
                     GYSKRLMENLLLVQSQAGK"
     gene            complement(2487..>2890)
                     /locus_tag="VLJ38_01340"
     CDS             complement(2487..>2890)
                     /locus_tag="VLJ38_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HSU38168.1"
                     /translation="REKVWRSLEALLAKDKAKTTINRISELGLLEMTRKRTRESLNRT
                     MHEMCFYCDGTGQIQSRTTIAYEILRQIRRERTTLSGYSVLVNAHPAVVDVMQGEERA
                     AVAEAERRYMRRIEFNPRTEYHIEQFDLHGK"
BASE COUNT          469 a          964 c          973 g          484 t
ORIGIN      
        1 gcgctcgtca aagagctgca cgtcgtgccg acgacggtgg gcggcgcgta cgggatggcc
       61 gcgatcggca aattctaaac gtcttccgca ctccgaagga gaactccaat gctcacccta
      121 cttctcatcc tgctcttgat cgccgccgtg ttctcggtcc ccgcgtggcc gtatagccgc
      181 ggctggggct actacccgag cggcgggctc ggcatcgtgg cgctcgtgct gctgctgctg
      241 ctcttcatgc accgatgacg gtgagcggcg cggttcggtg agcgccgtcc gcgccgctgc
      301 tcacgttcgc acgaagaacg gttgcgaaat cttttggaag accggcaacg cttcgcaagc
      361 ggcggcatgt gaagcgagcg ccggaaacga ggcgagctcg aacgcgccgg gactcgactc
      421 gagcagaaag cgaagtgcac acgcgacggc gatatcggcg tgccacagcg tgtcggcgaa
      481 ccagtagcgg gtcttccgct ccgttctgag cacttcgagc cgcgcgagca cgccgccgat
      541 ttgcgctcgg cagcggtcga tccaagcggc ggaaatctcc gggtgcagct tccgctcgta
      601 aacgaggctg accgctttgt cggcgagccc cgtcgcgagc gccgtaacga agagggcctg
      661 gcggcggagc ggcccctgcc gtggcaagag cgcccgctcg cccgcaactt cgtcgagcgc
      721 gtcgaggatg gccgagctct cgatcaggca ttcgccgtcc tcgagcagca gcgtcggcac
      781 gcggcggagc ggattgtaaa cggcgagttt gtcggcgtcg ccccacgtcg accagggtcg
      841 atgctcatag ggcacgccgt agagctcgag cgcgataccg acgcggcgca cgaacggcga
      901 gtcgaactgt ccgatcagga tcatccgttg cctcgaggcg ggagcatcac cgaaattagc
      961 cgatcgagcc agcgatcgcc gcgctcgcgg aagcgcggca agtagcgcgc gctgtcgcgg
     1021 cggatgcgtt cgacgccgtc cgcaccgagc gcgccgcgca cgtagtcggc gtcggcagcg
     1081 agccaggcgt cgacatccga ctcgtcgagc tcgacgtgga attgcaagcc gtactggctc
     1141 cggccgaggc ggaacatctg ctgcgggcag ctgagcgtcg atgcgagcaa ggtggcacca
     1201 ggcggcaagt cgaaggtgtc gccgtgccaa tgcaacacga gctcggccgc atcgaggccc
     1261 tcgagcgccg gctcttcact cgagctccgc acgaagtgaa cggcgcccca gccgacttcg
     1321 cgcgtgggcc gcggtggatc gcccgtgacg ttcgggtaca cgcgagcgcc cgccgccgcg
     1381 gccaggagct gcgcgccgag gcaaatcccg agcgtcggga aatcgcgcgc gacggcggcg
     1441 cgcagcaaat cgagctcagc ggccaagaac gggtagcgcg cgtcacccac gtcggcgacg
     1501 cccatcggtc cgcccatcac gacgagcagc tcggccccgt cgagcgtcgt gggcacggca
     1561 gcccccgcgt agagagcgcg ccggtcgagc tcgaaccccg cccggcggag cgccgaaccg
     1621 acgcgcgcgg gcccttcgtg aacgacgtgc tcgaggacga tcgcgcgacg catgcacgcg
     1681 gagtctgccc gagcggcgcg cccgcttcaa tcgcgagggg gcgtcacttg tacgtcgcga
     1741 tggcgacgta gcggagcacg cgcgtgcatg cggccgtgcg cgtcatcccg ttgcaggagt
     1801 gctcgccctg aaacttggtc gaccggctgc gtagggccgc gagcacctgg ttcgtcacgt
     1861 cgtgaccacc cccggagcac gtggagtcga gacacggcag atcgaacagc gccggggcgt
     1921 gcgcgacggc gacgtgcttc acgtgcactg tttccggcac cgaggcgccc tgccgcatct
     1981 cctcgatctc gagcttcagg gtcgcaagct gtggtgcctc cgcgatcaag cgcggcgcgc
     2041 gatcttcacg ctgcctgcgt tcggcggctg cttgagaggc ctcggtcgag cgtgatcgaa
     2101 aagacgccat cctcgttatt tccccgcctg gctttgcacg agtaacaggt tttccatcag
     2161 acgtttcgag tacccgcgga gctccttgaa cgcaaccccc atgcccgcgg gctgtgtctc
     2221 cacgcgcacg acgacaccca cgccctcgat cgtttccacg ccctcgagca cgacggagaa
     2281 cttgaggttc acttccgttc cgatcggcag cggtgaatcc gtgcggacga acgcgccgga
     2341 gcccgaaacg ttcgttacgt actcgcgtac gaagtcgtcg aacgaaggga actgcttgtt
     2401 gatcgtgagt cgcggcccct ggcggcgctc ggccgcggcg tcgttttctg gcttcgtcgg
     2461 gtgttcgtcg tgcgcgttca cggcgctcat ttcccgtgca gatcgaactg ctcgatgtgg
     2521 tactcggtgc gcgggttgaa ctcgatgcgg cgcatgtagc ggcgctcggc ttccgccacc
     2581 gcggcgcgct cttcgccttg catcacgtcg acgaccgcgg ggtgcgcgtt cacgagcacc
     2641 gagtagccgg agagcgtcgt ccgctcacgg cgaatctgcc gcagaatttc gtaggcaatc
     2701 gtggtgcgcg attgaatttg cccggttccg tcgcagtaaa agcacatctc gtgcatcgtg
     2761 cggttcaagc tctcgcgcgt gcgcttgcgc gtcatctcga gtagcccaag ctcgctgatg
     2821 cggttgatgg tggtcttggc cttgtctttc gcgagcagcg cctcgagcga gcgccaaacc
     2881 ttctcgcggt
//
LOCUS       DATIML010000079         2278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1171114, whole genome shotgun sequence.
ACCESSION   DATIML010000079 DATIML010000000
VERSION     DATIML010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1171114"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..2045)
                     /locus_tag="VLJ38_01345"
     CDS             complement(57..2045)
                     /locus_tag="VLJ38_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HSU38169.1"
                     /translation="MTEGPVPLRIARGARSALPSSAFLPTTREEMHARGWDELDVLIV
                     TGDAYVDHPAFGPVLVARFLEGRGYRVGVVAQPDWRSPDALLAMGRPRLFVGVSAGNL
                     DSMLNKLTAQKMVRSEDQYSPGGRPNQRPNRATIVYANLCRQAFPGVPLVLGGIEASL
                     RRIAHYDYWSDSVRRSILLDSKADLLVFGMGERAAWEIARRLAAGEPLSALRDVRGTA
                     LVLNNPAEWRDIAENPSRFVTDGRAVVLPSYEEVTRDLAAFARMTREFQVETNPHNAR
                     PLLQVHGDQAIYMNRPALPLEEADMDGLYDLPFTRLPHPRYGGERIPAYDTVKDSIVT
                     MRGCFGGCTFCSITEHEGRIIQSRSQASVLGEIRKLSRMAGFSGVLSDIGGPTANMYQ
                     LACKDERTEHACRRLSCVHPKVCDNLNTDHGPLIELLRAVRREKGVKRAFIASGVRYD
                     LAERSPEFIAELARHHTGGQVSVAPEHNDPQVLKRMKKPGIESYERFANAFCQASEAA
                     GKEQYLVPYFITGHPGSTLADTIQLARYLKQNDLRPRQVQDFIPTPMAVATAMYHTGI
                     DPLSGEPVAVVRDLREKRLLKALILWWDPAQWKLAREALKKAGRADLIGRRPDCLVPP
                     ESADGAARFSARAPRNATRPGPRKPGSTDAGRARRSRA"
BASE COUNT          339 a          743 c          818 g          378 t
ORIGIN      
        1 ggcgccgaag tgagcgcggc cgcgactcga gcggtcgtcg aagctagatc gcgagcttag
       61 gctcgagatc gacgcgcgcg cccggcgtcc gtggaacctg gtttccgcgg ccccgggcgc
      121 gtcgcatttc ggggcgcgcg cgcgctgaac cgagcagcgc cgtcggcgga ttcgggcggc
      181 acgaggcaat ccgggcgccg cccgatgaga tcggcgcgtc ccgccttctt cagcgcttcg
      241 cgcgcgagct tccactgcgc gggatcccac cagaggatca gcgctttgag cagccgcttt
      301 tcgcgtaagt cgcgcacgac ggcgacgggc tcgccgctca gcgggtcgat gcccgtgtga
      361 tacatcgccg tcgcgaccgc catgggcgtc gggatgaagt cctgcacttg gcgcggccgt
      421 aaatcgttct gcttgaggta gcgggcgagc tgaatcgtgt cggcgagagt cgaacccggg
      481 tgccccgtga tgaaataggg cacgaggtac tgctctttgc cggcggcttc gctcgcttgg
      541 caaaacgcgt tcgcgaagcg ctcgtagctc tcgatgccgg gcttcttcat gcgcttcaag
      601 acttgcgggt cgttgtgctc gggcgcgacg gagacttggc cgcccgtgtg gtggcgcgcg
      661 agctcggcga tgaactcggg gctcctctcg gcgagatcgt agcgaacgcc cgaggcgatg
      721 aaggcgcgct tgacgccttt ttcgcgccgc acggcgcgca agagctcgat cagcgggccg
      781 tgatcggtgt tcaggttgtc gcataccttg ggatgcacgc aggacaggcg ccggcaggcg
      841 tgctcggtgc gctcgtcctt gcaggcgagc tggtacatgt tcgccgtcgg gccgccgatg
      901 tcgctcaaga cgccgctgaa gcccgccatg cgcgacagct tgcggatttc tccgagcacg
      961 ctcgcctgcg agcggctctg gatgatgcgg ccctcgtgct cggtgatgct gcaaaacgtg
     1021 cagccgccga agcacccgcg catcgtgacg atcgagtcct tcaccgtgtc gtacgcggga
     1081 atgcgctcgc cgccgtagcg cgggtgcggc aagcgcgtga acggtaaatc gtagaggccg
     1141 tccatgtcgg cttcttcgag cggcagcgcg gggcgattca tgtaaatcgc ctggtcgccg
     1201 tgcacttgga gcaggggtcg cgcgttgtgc gggttcgtct cgacctgaaa ctcacgcgtc
     1261 atgcgggcga acgccgcgag atcgcgcgtc acctcctcgt acgagggcaa gacgacggcg
     1321 cgtccgtccg tcacgaagcg actcggattt tccgcgatgt cacgccattc cgcggggtta
     1381 ttcaacacga gcgccgtgcc gcgcacgtcc cggagcgcgc tgagcggctc gcccgccgcg
     1441 agccggcgcg cgatctccca cgccgcgcgc tcgcccatgc cgaacaccaa gaggtcggct
     1501 ttggagtcga gcaggatcga gcgccgcacc gagtccgacc agtagtcgta atgggcgata
     1561 cgccggagcg acgcctcgat accgccgagc acgagcggca cgccggggaa cgcttgccgg
     1621 cacaggttcg cgtacacgat ggtcgcgcgg ttcgggcgct ggttcggacg cccgcccggc
     1681 gagtactgat cctccgagcg caccatcttc tgcgccgtga gcttgttgag catcgaatcg
     1741 aggttaccgg cgctcacgcc gacgaagagc cgcgggcgtc ccatcgcgag cagcgcgtcg
     1801 ggcgaacgcc agtcgggctg cgcgacgacg cccacgcggt agccgcggcc ctcgagaaag
     1861 cgcgcgacga gcaccgggcc gaacgccggg tgatcgacgt aggcgtcgcc cgtgacgatc
     1921 agcacgtcga gctcgtccca gccgcgcgcg tgcatttctt cgcgcgtcgt cggtaggaac
     1981 gcggagcttg gcagcgcgga gcgagccccg cgcgcgatgc ggagcggcac cggaccttcg
     2041 gtcatggcgg cggagtgtag ctcggcggac gcgggggtgc cggcggtgag ctctcgtgcg
     2101 gcggtggctt gcggttttac ggcgtcgcgc ggagacgaat cgccgtgagc gcggccacca
     2161 gagcggcggt gacgttcgtg ccgtctccga gcgagaatgc tcgctgcgtg ccgcctccgg
     2221 cggcgatttt gtcgagcaca ttttggtcga cgccgccgaa gccgatgacg aaggtcct
//
LOCUS       DATIML010000080         1760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4057884, whole genome shotgun sequence.
ACCESSION   DATIML010000080 DATIML010000000
VERSION     DATIML010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4057884"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(316..492)
                     /locus_tag="VLJ38_01350"
     CDS             complement(316..492)
                     /locus_tag="VLJ38_01350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38170.1"
                     /translation="MKGAVPELAMGSRAEGPQQPAPFFEIEPRALHRESNELSVSAPP
                     RDGSVNVLQSNHRD"
     gene            670..1290
                     /locus_tag="VLJ38_01355"
     CDS             670..1290
                     /locus_tag="VLJ38_01355"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSU38171.1"
                     /translation="MALTVCERCRQGQQHGRGELVQVSQAAVDMAECDGQHVGHLETG
                     VEPRAHVGTAKKSTRATQTILPALRRQVLRRDGGRCQVPGCRHATFVDVHHLRPRSEG
                     GANTIENLVTLCSAHHRASHAGKLSSAGTPSEGLRFLHADGTPYGHAPSPALAELRAS
                     AYRALIHLGFRESEAKWALARAPLTANVTLEDVIRQTLCDLARERH"
BASE COUNT          289 a          587 c          582 g          302 t
ORIGIN      
        1 gaggttacag cccgccccgc cgcccgagcc tttgggctgt ggtgttgcag cgaactcgtg
       61 cgggctgaaa gagcaggtgg tccgtcgatt ggtatggaca gctttccgcc gacgaagagc
      121 gcacatccgt tcgacgagct ctgaatcgcg tcgtcgcgct cgtctgttcg atagagccgg
      181 cgtttcgcgg cgccggcgag tcgaccgccg tccgaggctc gcaagacgcg cagcgcggcg
      241 cacgcgaagc cgaaaaagtg cgtgatagag gagacgtcga ctcggaagca caaacaggga
      301 ggcttcgaca tggcatcagt cgcggtggtt ggattggagg acgttcacgc tgccgtctcg
      361 tggcggcgcg ctcacgctga gctcgttcga ctctcggtga agcgcgcggg gctcgatttc
      421 gaagaagggc gctggctgct gcgggccttc cgctcgggag cccatcgcga gctcgggtac
      481 ggctcctttc acgagtacac cgagcggctc ttcacgtgct ccgcttcgag atttcaggcg
      541 aagcgctcgc gagctttcgc gaagccatgg cgaagatccg gcgcgaagcg ggcgaagcac
      601 tcgatacgac gcggccatct tgctcctcag tcgcagcatc ctcgaaggcg cgcgggacga
      661 agttatcagg tggcgctcac cgtgtgcgag cgctgccggc agggccagca gcacggccgc
      721 ggtgagctcg tccaggtgtc gcaggcagcg gtcgacatgg ccgagtgcga tgggcagcac
      781 gtcgggcatc tcgaaaccgg ggtcgaaccg cgcgcccacg tgggtacagc gaagaaatcc
      841 acgcgcgcga cgcaaactat cctgcctgcg ctccggcgcc aggtgctgcg ccgcgacggc
      901 gggcgttgcc aggtgcccgg ctgccggcac gcaactttcg ttgacgtgca ccatctccgg
      961 cctcgctccg aaggcggcgc gaacacaatc gagaatctcg ttaccctctg cagcgcgcat
     1021 caccgtgcaa gtcacgccgg aaagctttcg agcgcaggga cgccgtccga aggtctccgt
     1081 tttctgcacg ccgacggcac gccttacgga cacgcaccct cacccgctct cgccgagcta
     1141 cgcgcgagcg cctatcgcgc cctcattcac ctgggcttcc gcgagtcgga ggcgaaatgg
     1201 gcgctcgctc gtgctcctct cactgccaac gtcacgctcg aagacgtcat ccgccaaacg
     1261 ctgtgcgacc tcgcccgaga acggcactga ccctacggct cgggcggcgg ggcagcacca
     1321 cccgcccggc cgtgcttcgg tgtggctcat cgtgtctgca cacggcgacg tcgtctcgtg
     1381 cgattctgcg ccccgtcgca cccgcccgat ggcacccgat gtctacggca ggagacttcg
     1441 ctgagcactt gagcatcgcg ccggcctgtc ttatgcgcct cacgcgcttc gcgcgtggct
     1501 agcgcccctc aaatgcatgg ttacttacgg taacgcggca ctagcgggtc agccgcggcg
     1561 cttggacgcg ccatttcgcc cgtcttcgtg cccaaaccac ccccaagacc gacgaacgaa
     1621 gcgggcagtg ccgttcgcgc cgcgtcggtc gtcggctggg tgattacggc tggttcgtcg
     1681 agaggcgatt gcgcagatcg ttgtagtcgc tcgggctcat gcaggtgaag cgatcgacgg
     1741 gcggtaggtc cgtcggatcg
//
LOCUS       DATIML010000081         1623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1749053, whole genome shotgun sequence.
ACCESSION   DATIML010000081 DATIML010000000
VERSION     DATIML010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749053"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VLJ38_01360"
     CDS             complement(<1..354)
                     /locus_tag="VLJ38_01360"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU38172.1"
                     /translation="MSDTARWVAHYRALEAERPDAIVRDPWARRLAGPRGRLIAEALP
                     ELSLRWMIPVRARIYDELLLETLAAGDFTTVLNLAAGFDTRPYRLALPPRLRFIEADL
                     PHLLAEKTELLAAERP"
     gene            complement(374..679)
                     /locus_tag="VLJ38_01365"
     CDS             complement(374..679)
                     /locus_tag="VLJ38_01365"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU38173.1"
                     /translation="MNTRTWKSVEQARLGAAQVARVKARAEREISALTLKELRQDLAV
                     TQAKLAEQARMTQSELSRLESRADHRVSSLRRYVEALGGVIEITAVIGGRRVKLTDV"
     gene            complement(698..1414)
                     /locus_tag="VLJ38_01370"
     CDS             complement(698..1414)
                     /locus_tag="VLJ38_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38174.1"
                     /translation="MLELLTSEQFATWFATLEDGAAEDVATALEVIGELGPERAPPAS
                     RESLLWYEHASVAEFGLNGALPWDLEAWGAFRDYAQRVLAQLEAPRFAARLERLGTEQ
                     AACVLKTIRRIRRAVDPRLRWALELGGHPAAASAPVRPENACAKVRQLYFEALEAAGF
                     AVKDVPAHSRALRELSRRSPAPAFRVLYGVDTERKTALVVLGEWLDRSYYGDSVRRAE
                     RLWSAFMNGERLALEPAALR"
BASE COUNT          246 a          563 c          568 g          246 t
ORIGIN      
        1 gggccgttcg gcggcgagaa gctccgtttt ttccgcgagc aagtgcggca gatcggcttc
       61 gatgaagcgg agccgtggcg gtagcgcgag ccgatacggt cgcgtgtcga aaccggcggc
      121 gaggttcaac acggtcgtga aatcgcccgc ggcgagcgtc tcgagcaaga gctcgtcgta
      181 aatccgcgct cgcaccggga tcatccagcg cagcgacagc tcgggtagcg cttcggcgat
      241 cagccgcccg cgtggtccgg cgagccggcg agcccaggga tcgcgaacaa tcgcgtccgg
      301 acgctccgct tcgagcgcgc gatagtgcgc gacccagcgc gccgtatcgc tcacgtcggc
      361 aaagagcgca gcctcagacg tccgtgagct tgacacggcg gcctccgatc acggccgtga
      421 tctcgatcac gccgccgagc gcctcgacgt aacggcgcaa gctcgagacg cggtgatcgg
      481 cgcggctctc gagccgtgac agctccgact gcgtcatgcg tgcctgctcg gcgagcttag
      541 cctgcgtcac ggcgagatcc tgacgcagct ccttcagtgt gagggcgctg atctcgcgct
      601 cggcgcgtgc cttgacgcgc gcgacttgcg ccgccccgag gcgcgcctgc tcgaccgatt
      661 tccacgtccg ggtgttcact cgagtgtttc ctttcgctca gcgcaatgcc gcgggctcga
      721 gcgccaggcg ctcgccgttc ataaaggcgc tccagagccg ctcggcgcgc cgaacggagt
      781 cgccgtaata gctgcggtcg agccactccc cgagcacgac cagcgccgtc ttgcgctccg
      841 tgtcgacgcc gtagagcacc cggaaggccg gcgcgggcga gcggcgcgag agctcgcgca
      901 atgcgcgcga gtgggcgggg acgtccttga cggcgaagcc cgccgcttcg agggcctcga
      961 agtagagctg gcgcactttg gcgcaggcgt tctccggacg aaccggcgcc gacgcggcag
     1021 ccggatggcc gccgagctcg agcgcccagc gcagccgtgg atcgacggcg cgccggatgc
     1081 gacggatcgt cttcaggacg caggccgctt gctccgtacc gagccgctcg aggcgcgccg
     1141 cgaagcgtgg cgcctcgagc tgtgcgagca ctcgctgcgc gtaatcgcgg aacgcgcccc
     1201 acgcttccag atcccagggc agcgcgccgt tcagcccgaa ctctgcgacg ctcgcgtgct
     1261 cgtaccagag gagcgactca cggctggcgg gcggcgcccg ttcgggaccg agctccccga
     1321 tcacttcgag tgcggtcgcg acgtcttcgg ctgcgccgtc ctcgagcgtc gcgaaccagg
     1381 tggcgaactg ctcgctcgtc agtagctcga gcatggcggg agcatgtctt ctccagcata
     1441 tgctgtcaag tgcatatctg accccgggcc gcgctgcggc tggccgctcg ctggcttgag
     1501 gccccttttc agccgccctg cagaaacgct gcggctcgag cgcgctcggc gggcgtgagc
     1561 acctcatcga gccaagccaa gagcggcgcg acggcgcgga aggagcggcg attgggactg
     1621 gcc
//
LOCUS       DATIML010000082         4316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_306022, whole genome shotgun sequence.
ACCESSION   DATIML010000082 DATIML010000000
VERSION     DATIML010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4316
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306022"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VLJ38_01375"
     CDS             <1..186
                     /locus_tag="VLJ38_01375"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF014499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HSU38175.1"
                     /translation="IVPLQDLLGRGSDARMNVPGVAAGNWSYRVQEPELTPALAERLG
                     RLCEIYERIPPSLRRSP"
     gene            191..1918
                     /locus_tag="VLJ38_01380"
     CDS             191..1918
                     /locus_tag="VLJ38_01380"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSU38176.1"
                     /translation="MMGADRRSSLVRLARLGAFLVVLPRLAHAQAVPPPASPPTNGGE
                     DQALPEAPPSPPAPEPSAEPSPAPSAPPPPTAFDAGSSAPAPSPTAPPAACDCDGEHA
                     ERASSRVRYELEGISVRGNTRTNRRVVMRYVPFKPGDIIDVNNPAFELLRYRLLGTGF
                     FREVELSLEKGSRRGQVLLVIEVSERNTIVVNDVWMGLSKDADVQGLEKGQPRPLTAY
                     AGLDVAETNLAGTGITLGGAAAFAQYQLGLRLHFLDPAFLGSKWMVAGTLLYNNAHDF
                     FGNAKVKQAGSPQGEGELTDYAIVAYRRLGGTLGFGRDLSVSTQVWAHYRLEAIDADY
                     PKAASHQRGFDREPIDFNIIRGKSWLSTVRATLQHDTRDQPFLPTHGWLVTLNGEFSL
                     LPTAISYSYQKVEAHATHFWQLPWHGDVVSLDLYGGAIAGNAPFFEQFYVGDLSDFLP
                     DRVLGMNFDRRPPPNFFGTQIVEERYGDYAFKILGEYRLQLYRGQRSIYGIDAFAGAG
                     IYGLANARTFSDPPTGYSGLARIPIDFTATLGIRADTAVGGFTFSLSNALGFAFTGKG
                     PAGQQGSQP"
     gene            1915..2616
                     /locus_tag="VLJ38_01385"
     CDS             1915..2616
                     /locus_tag="VLJ38_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38177.1"
                     /translation="MSRKPARRRRWAWLPLLIVLSVARGAAAQAEPPPVQRDIDLSWD
                     TDKNLLYLDIGFRDVIDDGIRNKLSRGLPTTIVLTATIQKAGSSEPLSSTTQTCRITW
                     HVWEEAYYVEIVRPGWTQARWTTTLEGVLRRCAEARRLLAGDLTQVSPALQLYARGTI
                     QINPVSAEVLQQLKRWVMRPSSTGTAAPGDALFSTFAGLFMQRIGDAEHELHFFTRAR
                     LPTRFSSKAEERRAQ"
     gene            2648..3190
                     /locus_tag="VLJ38_01390"
     CDS             2648..3190
                     /locus_tag="VLJ38_01390"
                     /inference="COORDINATES: protein motif:HMM:NF024638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU38178.1"
                     /translation="MALWFPVALRLEGRRCLVVGTNEDAAARARTLGEAGASVVHARE
                     FAPADLEGTWLAVLTEREPELAERMQRECEARRIFFCAVDEPKVGSFAHLALARAGSV
                     TAAIGTNGEAPALARRLRELLQELFDRAGLATFAARHAELRRATPSERRRDVLGDDVR
                     DVRLEGELVLPDAGTPPRRA"
     gene            complement(3193..3822)
                     /locus_tag="VLJ38_01395"
     CDS             complement(3193..3822)
                     /locus_tag="VLJ38_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38179.1"
                     /translation="MGASTTGGRPLRAQLVVAGVVCVILIAVPLYLLRRPSTPSTASA
                     AASAASASAQRAAPAPILLDAGAATPAKAAERVRLAPPQRVKCGASAAQARVEGGLCD
                     SLPPVEQALATAIRGAADCAPKRKEEGSINFVLNLDFNQRKFHVFPGASGSWRGRLAR
                     KAADCVTRSMSNPDWGALPHQYRYYWIAILATYPLPSAAAVPAGTPTFE"
     gene            complement(3915..>4316)
                     /locus_tag="VLJ38_01400"
     CDS             complement(3915..>4316)
                     /locus_tag="VLJ38_01400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU38180.1"
                     /translation="LTRDQLVRVMEDDRAFGEWSGVPLTIARYQIRGPNRHVSDRPAI
                     LEMLALRRAAQRVVELTEMLLLSLVPVTGGRTGPLKFAIAMTGPSLDEARNVVEQVVS
                     QVQGNMPDSLDLAATIVRAEPGQQVQALLDD"
BASE COUNT          684 a         1522 c         1453 g          657 t
ORIGIN      
        1 atcgtcccgc tccaggatct gctcggccgg ggcagcgacg cgcgcatgaa cgtccctgga
       61 gtcgccgccg gcaactggtc gtaccgcgta caggaacccg agctcacgcc ggcgctcgcc
      121 gagcgcctcg ggcggctgtg cgagatttac gagcgcattc cgcccagcct gcgtcgctcg
      181 ccgtgacgcg atgatgggag ccgatcgccg gagctcgctc gtgaggctcg cgcgcctggg
      241 cgcgttcctc gtggtgctgc cgcgactcgc gcacgcccag gccgtgccgc cgccggcaag
      301 cccaccgacg aatggcgggg aagaccaagc gcttcccgaa gcgcccccct cgccgcccgc
      361 acccgagccg tccgccgagc cgtcgccggc cccgagcgca ccaccgccac ctaccgcgtt
      421 cgatgccggc agctcggcgc cggcgccgtc gccgacggcc ccgcccgctg cgtgcgattg
      481 cgacggcgag cacgctgagc gggcgagctc gcgcgtgcgc tacgagctcg aagggatcag
      541 cgtgcgcggg aacacgcgca ccaatcgccg cgtggtgatg cgctacgtgc cattcaagcc
      601 cggcgacatc atcgacgtga acaatcccgc gttcgagctc ttgcgctatc ggctgctcgg
      661 cacgggattt tttcgcgagg tcgagctctc gctcgaaaaa ggctcgcggc gcggacaagt
      721 cctgctcgtg atcgaggtga gcgagcggaa cacgatcgtc gtcaacgacg tctggatggg
      781 cctctcgaaa gacgccgacg tgcaaggcct cgagaagggt cagccacgcc cgctcaccgc
      841 ctacgccggg ctcgacgtcg cggagacgaa cctcgccggc accggtatca cgctcggcgg
      901 cgccgccgct ttcgcgcaat accagctcgg cctgcggctg cacttcctcg atcccgcctt
      961 tttgggcagc aaatggatgg tcgcgggcac gctgctctac aacaacgcgc acgatttttt
     1021 cggcaatgcc aaggtgaagc aggcggggtc gccgcagggg gaaggcgagc tcaccgatta
     1081 cgcgatcgtc gcttaccgac ggctcggcgg cacgctcggc ttcggccgcg acttgtccgt
     1141 ctcgacgcag gtctgggcgc actaccggct cgaagccatc gacgccgact acccgaaggc
     1201 agcgtcgcac cagcgcggct tcgatcgcga gcccatcgat ttcaacatca tccgcggcaa
     1261 gagctggctc tcgaccgtgc gcgcgactct gcagcacgac acgcgtgacc aaccgtttct
     1321 accgacgcac ggctggctcg tcacgttgaa cggggagttc tcactcttac cgacggccat
     1381 cagttacagc taccaaaagg tcgaagcgca cgcgacgcac ttttggcagc tgccttggca
     1441 cggggacgtg gtctcgctcg atctgtacgg cggagcgatc gccggtaacg cgccgttctt
     1501 cgagcagttc tacgtcggcg atctgagcga ttttttgccg gatcgcgtgc tcggcatgaa
     1561 cttcgatcgg cgtccgccgc cgaatttttt cggcacccaa atcgtcgagg aacgctatgg
     1621 cgattacgcg ttcaagatcc tcggcgagta tcggcttcag ctctatcgcg gccagcgctc
     1681 gatttatggc atcgacgcct tcgcgggcgc tggcatttac gggctcgcca acgcgcgcac
     1741 gttcagcgat ccgccgaccg gctactcggg actcgcgcgc attccgatcg atttcacggc
     1801 gacgctcggg atccgtgccg acaccgccgt cggcggcttc acgttttcgc tctcgaacgc
     1861 gctcggcttc gcgttcacgg gcaaaggccc cgcgggccag caaggcagcc agccgtgagc
     1921 cggaagccag cgcgacggcg ccgctgggct tggctgccgc tcctgatcgt cctctcggta
     1981 gcgcgcggcg ccgcggcgca agccgagccg ccaccggtgc agcgcgacat cgatttgagc
     2041 tgggacacgg acaagaacct gctctacctg gatatcggct tccgcgacgt catcgacgac
     2101 ggcatccgca acaagctgag ccgcggactg ccgaccacga tcgtgctcac ggccacgatt
     2161 caaaaggccg gcagcagcga gccactctcg agcacgacgc aaacctgtcg catcacgtgg
     2221 cacgtctggg aagaggcata ctacgtggaa atcgtgcgtc ccggctggac ccaagcccgt
     2281 tggaccacga cgctcgaagg cgtactccga cgctgcgccg aagcgcgccg cctactcgcg
     2341 ggcgacctaa cgcaagtctc gcccgccctg cagctctacg cgcgcggcac gatccagatc
     2401 aaccccgtga gcgccgaggt cctgcagcaa ctcaagcgct gggtgatgcg cccgagcagc
     2461 accggcacgg cggctccggg cgacgcgctc ttcagtacct tcgccggcct gttcatgcag
     2521 cgcatcggcg acgcggagca cgagcttcat tttttcacgc gcgcgcgcct gccgacacgc
     2581 ttcagcagca aggcggaaga acggcgcgcg cagtgacggc gcctgctccg gatgctacgg
     2641 acgggccgtg gctctttggt tccccgtcgc gctccggctc gaaggtcgtc gctgtctcgt
     2701 cgtcggcacg aacgaagacg ccgcggcgcg agcacggacg ctcggcgaag cgggcgcgtc
     2761 cgtcgtgcac gcgcgcgagt ttgcccccgc cgatctcgaa ggaacctggc tcgccgtcct
     2821 gaccgagcgg gagcccgagc tcgccgagcg gatgcagcga gagtgtgagg cgcgccgtat
     2881 cttcttttgc gcggtcgacg agcccaaggt cggcagcttc gcgcacctcg ccctcgcccg
     2941 cgccggcagc gtcaccgcgg cgatcgggac gaacggcgag gcgcccgcgc tcgcacgacg
     3001 gctgcgcgag ctcttgcagg agctcttcga ccgcgctggg ctcgcgacgt tcgcggcgcg
     3061 gcacgccgag ctccggcgcg cgacaccgtc cgaacgccgg cgcgacgtgc tcggcgacga
     3121 cgtgcgcgac gtgcgtctcg agggcgagct cgtgttaccg gacgccggca cgccgccgcg
     3181 ccgcgcgtga gctcattcga acgtcggcgt ccccgccggc accgccgcgg cgctcggcaa
     3241 cggatacgtc gcgaggatcg cgatccagta atagcgatac tggtgcggca gggcgcccca
     3301 atccggattc gacatgctgc gcgtcacgca gtcggcggcc ttgcgcgcga gccgacctcg
     3361 ccagctgccg ctcgcgcccg gaaagacgtg gaactttcgc tgattgaaat cgaggttcag
     3421 gacgaaattg atcgaccctt cctctttgcg cttcggcgcg caatccgcgg ctccgcggat
     3481 cgccgtggcg agcgcctgct cgacgggcgg caagctgtcg cagagtccgc cttcgacgcg
     3541 agcctgcgct gccgaggcgc cgcacttgac gcgttggggc ggagcgagtc ggactcgttc
     3601 ggcggccttg gcaggtgtgg cggcgcccgc gtcgagcagg atcggcgctg gcgccgcgcg
     3661 ctgcgcgctc gcagaagcgg ccgacgcagc ggcgctcgcc gtcgagggcg tcgagggacg
     3721 gcgcagcagg tagagcggca ccgcgatcag gatgacgcac acgacgcccg cgacgacgag
     3781 ctgggcgcgc agcggacgac cgcccgtcgt gctcgcgccc acgccgagac gacgtgagcg
     3841 cggttcaccg gagagcgaag ggatcgaagt gcgcgggggg cgggccatcg ggccgcgaag
     3901 agtggaggtg tgggttagtc gtcgagcagg gcttggacct gctggcccgg ctcggcgcgc
     3961 acgatcgtgg cggcgagatc gagtgaatcg ggcatgttcc cctgcacctg cgacacgacc
     4021 tgctcgacga cgttgcgagc ctcgtcgagg ctcggccccg tcatcgcgat cgcgaatttg
     4081 agcggccccg tccgcccgcc cgtcacgggc accaagctca aaagcagcat ttccgtgagc
     4141 tcgacgacgc gctgagccgc gcgcctgagc gcgagcatct ccaaaatggc ggggcgatcg
     4201 ctcacgtggc ggttcggtcc gcggatctgg tagcgcgcga tggtgagcgg cacgcccgac
     4261 cactcgccga acgcgcgatc gtcctccatc acgcgcacga gctggtcgcg cgtgag
//
LOCUS       DATIML010000083         4228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_17362, whole genome shotgun sequence.
ACCESSION   DATIML010000083 DATIML010000000
VERSION     DATIML010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4228
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17362"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VLJ38_01405"
     CDS             <1..279
                     /locus_tag="VLJ38_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38181.1"
                     /translation="ALVRVDGGSAKARTLGILGLAIGIPVTIGGGALYSYGAFSERDG
                     MRTSGAVVLGVGALAVLASLPFLLAGATTVRDSRGSAIARSAAAVAAF"
     gene            complement(320..1399)
                     /gene="serC"
                     /locus_tag="VLJ38_01410"
     CDS             complement(320..1399)
                     /gene="serC"
                     /locus_tag="VLJ38_01410"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HSU38182.1"
                     /translation="MARVMNFNAGPAALPLAALERAQAELLDLGGTGMSVMEHSHRGK
                     AYEAVHNEAIALVRELLAVPESHLILLLQGGASQQFATVPMNLLPAGKSADYVLTGSW
                     SQKAYKEGKTVGTVRLAGTTEKDGKFGRIPAQSELSLDANAAYAHITSNNTIFGTQWD
                     KFPETGNVPLVADMSSDLMWRPIDVSKFGLIYAGAQKNLGPSGLVVVIVRKDLVEGGR
                     KDIPVIFQYRTHAENNSLYNTPPTFSVYLLRNVLDDVKKNGGLKAMEQRNRDKAKLLY
                     DVIDARSDFFSSPVDKAARSTMNVVFTLKTPELEAEFLAEAQKRKMVGLKGHRSVGGM
                     RASIYNAVETAWVKALADFMREFKA"
     gene            complement(1412..2041)
                     /locus_tag="VLJ38_01415"
     CDS             complement(1412..2041)
                     /locus_tag="VLJ38_01415"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:NF013468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HSU38183.1"
                     /translation="MKELVAALEAGLVVAAATESFFGLFVDATSSAALDNLLRVKPRG
                     ADKGIPLVMPDASSWPLLVPEVPPAARALAEALWPGALSIALPARAELDRRVTLDGSV
                     AVRVPAPSPAAELARLFGRPLTATSANLPGDAPATDETAVAEQLGQAIASGILLVLPG
                     TSPGGLPSTVVDVGRERSRIVREGRVPRARVAEVLARAGARLDEAGRPS"
     gene            complement(2038..3339)
                     /gene="purD"
                     /locus_tag="VLJ38_01420"
     CDS             complement(2038..3339)
                     /gene="purD"
                     /locus_tag="VLJ38_01420"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HSU38184.1"
                     /translation="MARRRKVLVVGSGGREHALALRLLASESVGEVVVTPGNAGMLAA
                     PARFAPKVLRSAAGSAVEIAVREAVDLVVIGPEVPLCAGLSDELAERGVTVFGPTRAA
                     AQLEGSKAFMKDFVVRHGIRTARHEVVRAQGELEQAVRRFADAPVVKADGLCAGKGVV
                     VAASEAEALAAARGMLSGEAFGDAGKTVVLEERVEGAELSLHALSDGERFVLLPAAQD
                     HKRLFDGDRGPNTGGMGTYAPAPLAAPELVERARHEIFEPALRGMAADGHPFRGVLFA
                     GLMVTPARELVLLEFNVRFGDPETQVMLATIDGDLGDALDAAARGALDPTALAPAGRH
                     AVCIVVAAHGYPEKPRTGDAITGLEAAEALEDVSVLHAGTAVSGDAVVTAGGRVLGVR
                     ASAPTLTDARERAYAAVGRIHFEGMQFRRDIAARAFGEVAS"
     gene            3481..4203
                     /locus_tag="VLJ38_01425"
     CDS             3481..4203
                     /locus_tag="VLJ38_01425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38185.1"
                     /translation="MKRSYHPWLVGAAVGVWLLSNPGNARADAKFEFGPRLGYALPFG
                     DATSASGDELKHTFKGQVPIWLDAGARIAERFFVGAYLDYNVAILSSQLSKVCDAIDA
                     SASAYGVSASCSGHDVRFGGEFLFHLLPKGPVDPWVGAGIGYEWLAFSVTQETPSAAT
                     TLSAGIHGFEFTNLQLGLDIPVGRDMAIGPFLAFTLAEFSRTTVDCSGDCTGVNLPGG
                     ADISQNALHEWLFLGARATFEL"
BASE COUNT          621 a         1468 c         1432 g          707 t
ORIGIN      
        1 gcgctcgtgc gcgtcgacgg cggctcggcc aaagcgcgca cgctcggcat cctcgggctc
       61 gcgatcggga tcccggtgac gatcggtggc ggggcgctct atagctacgg cgccttctcg
      121 gagcgggacg gcatgcgcac gagcggcgcc gtcgtgctcg gcgtcggtgc gctggcggtg
      181 ctcgcctccc tacccttctt gctggcgggc gcgacgaccg tgcgcgacag ccgcggcagc
      241 gcgatcgcga gatcggctgc cgcggtggcc gcgttttagc cctgggcgcc gcgtttggcg
      301 ctacgcccgg acgtcgcggc tacgccttga actcgcgcat gaaatcggcg agcgccttga
      361 cccacgccgt ctcgacggcg ttgtagatcg aggcgcgcat gccgccgacc gagcggtgcc
      421 ctttgaggcc caccatcttg cgcttctgcg cctcggccaa aaactccgcc tcgagctcgg
      481 gcgtcttcag cgtgaagacg acgttcatcg tcgagcgtgc cgccttgtcg acgggcgagc
      541 tgaagaaatc cgagcgcgcg tcgatcacgt cgtaaaggag cttcgccttg tcgcggttgc
      601 gctgctccat cgccttgagg ccgccgttct tcttcacgtc gtcgagcacg ttgcgcagca
      661 gatagaccga gaacgtcggc ggcgtgttgt agagcgagtt gttttcggcg tgcgtgcggt
      721 actggaagat gaccggaatg tccttcctac cgccttcgac taggtcttta cgcacgatca
      781 cgacgacgag accgctcggc ccgaggttct tctgcgcgcc ggcgtagatc aggccgaact
      841 tcgacacgtc tatcgggcgc cacatgaggt cgctcgacat gtcggcgacg agcggaacgt
      901 taccggtctc ggggaacttg tcccactgcg tgccgaagat ggtgttgttg ctcgtgatgt
      961 gagcgtaggc ggcgttcgcg tcgaggctga gctccgactg cgcggggatg cggccgaact
     1021 tgccgtcctt ctccgtggtg ccggcaaggc gcaccgtgcc gacggtcttg ccttccttgt
     1081 acgccttctg cgaccaggag ccggtgagca cgtagtcggc gctcttgccc gcgggcaaga
     1141 ggttcatcgg caccgtagcg aactgctggc tcgcgccgcc ttgaagcagc aaaatcaggt
     1201 gactctccgg cacggcgagc aactcgcgca ctagcgcgat cgcctcgttg tgcacggctt
     1261 cgtaggcttt accgcgatgg ctgtgttcca tcacgctcat gcccgtgccg ccgagatcca
     1321 agagctccgc ttgcgcgcgc tcgagagccg cgagcggcaa cgccgccggg cctgcattga
     1381 aattcatgac tcgtgccatt gggcggcttt gttagctagg ccgccccgcc tcgtcaaggc
     1441 gcgcccccgc ccgtgccaga acctcggcga ctctggcacg cggtacgcga ccttcccgca
     1501 cgatccgcga acgctcgcgg ccgacgtcga cgaccgtcga cggcaaaccg cccgggctcg
     1561 tccccggcag gacgagcagg attccgctcg cgatggcctg tcccagttgt tccgcgacgg
     1621 ctgtctcgtc cgtcgcgggc gcgtcaccgg gcaagttggc gctcgtcgcg gtcagcggtc
     1681 tgccgaacag acgcgcgagc tccgcggcgg ggctcggcgc cggaacgcgc acggcgacac
     1741 tgccgtcgag cgtgacccgc cgatcgagct cggcgcgcgc gggaagcgcg atgctgagcg
     1801 cccctggcca cagcgcctcg gcgagcgcgc gcgctgcggg cggcacctcg ggcacgagca
     1861 agggccagct cgacgcgtcg ggcatgacaa gcgggatgcc cttgtcggcg ccgcgcggct
     1921 tcacgcgcag caagttgtcc agcgccgccg agctcgtcgc gtcgacgaac aaaccgaaga
     1981 acgactccgt cgcggcggcg acgacaagtc cggcctcgag cgcggcgacg agctctttca
     2041 cgacgcgacc tcgccgaaag cgcgcgcggc gatgtcacgg cggaattgca tgccttcgaa
     2101 gtgaatgcga ccgaccgccg cgtacgctcg ctcgcgcgcg tccgtgagcg tcggcgcgct
     2161 cgcgcgtacg ccgagcacgc gaccgcccgc ggtgacgacg gcgtcacccg acacggcggt
     2221 gcccgcgtgc agcacgctca cgtcctcgag tgcttctgca gcctcgagac cggtgatggc
     2281 gtcgcccgtc cgcggttttt ccgggtaacc atgggccgcg acgacgatgc acaccgcgtg
     2341 acggccagcg ggcgcgagcg ccgtggggtc gagcgcgccg cgcgccgcgg cgtcgagcgc
     2401 gtcgccgaga tcgccgtcga tggtcgcgag catcacttgc gtttccggat cgccgaagcg
     2461 cacgttgaac tcgagcagca cgagctcgcg cgcgggcgtc accatcaaac cggcgaagag
     2521 cacgccgcga aacgggtggc cgtccgccgc catgccgcgc agcgcgggct cgaagatttc
     2581 gtgacgcgca cgttcgacga gctcgggggc ggcgagcggc gcgggggcgt acgtccccat
     2641 gccgcccgtg ttcggtccgc gatcgccgtc gaagagccgc ttgtggtctt gagccgccgg
     2701 taagagcacg aagcgctcgc cgtcggaaag cgcgtgcaga ctcaactccg cgccttcgac
     2761 gcgctcctcg agcacgacgg tcttgcccgc gtcgccgaag gcttcgccgc tgagcatgcc
     2821 gcgcgccgcg gcgagcgcct cggcctcgga cgcggccacg accacgccct tgccggcgca
     2881 aagcccgtcc gccttgacga ctggagcgtc agcgaagcgc cgcacggctt gctcgagctc
     2941 gccttgcgcg cgcaccactt cgtgccgcgc ggtcctgata ccgtggcgca cgacgaagtc
     3001 cttcatgaac gccttggagc cctcgagctg cgcggcggcc cgcgtcggcc cgaacaccgt
     3061 gactccgcgt tcggctagct cgtccgagag accggcgcag agcggcactt cgggaccgat
     3121 cacgaccaaa tcgaccgctt cacgaacggc gatctcgacg gcgctgcccg cggcggagcg
     3181 caacaccttg ggcgcgaaac gtgccggcgc cgcgagcatg ccggcgttgc ccggcgtgac
     3241 gacgacctca cccacactct cggaggcgag cagccggagc gcgagggcat gttcccgccc
     3301 gccggaaccg accacgagta ccttgcgtcg acgtgccaag ctcggccgtc tacaccgtgg
     3361 cgcggcgtgc cgccagcctc gagttccgcc gtcggcgagc ttcgtttacg gacccgctaa
     3421 cccgcgcaaa tttgccgagc tgcgcgcggg cgcggtagct tgtgacctgg agggctctcc
     3481 gtgaagcgca gctatcatcc ctggctcgtg ggtgcggcag tcggcgtgtg gctgctttcg
     3541 aatccaggca acgcgcgggc ggacgcgaag ttcgagttcg ggccacgtct cggctacgcc
     3601 ctaccgttcg gcgacgccac ctcggcgagc ggcgacgaac tcaagcacac cttcaagggc
     3661 caagtcccga tttggctcga cgcgggcgcg cgcatcgccg agcggttctt cgtgggcgcg
     3721 tatctcgact acaacgtcgc gatcctctcg tcccagcttt ccaaagtgtg cgatgccatc
     3781 gacgcctcgg cctcggctta cggcgtgagt gcctcttgca gcggacacga cgtgcgcttt
     3841 ggcggcgagt ttctgtttca cctgctgccg aaggggccag tcgatccgtg ggtcggcgcg
     3901 ggcatcggct acgaatggct cgcgttctcg gtcacccagg agacgccgag cgcggccacc
     3961 acgctttctg cgggtattca cggtttcgag tttacgaacc ttcagctcgg cctcgatatc
     4021 cccgttggac gcgacatggc gattggtcct ttcctcgcct tcacgctcgc cgagttcagc
     4081 cggaccacgg tcgactgttc tggggattgc accggcgtga atctccctgg cggcgccgac
     4141 atcagccaaa atgcgctgca cgaatggttg tttctgggtg cgcgtgcgac cttcgagctt
     4201 tgacttggcg gaagtgggac tgagggcg
//
LOCUS       DATIML010000084         6122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4348492, whole genome shotgun sequence.
ACCESSION   DATIML010000084 DATIML010000000
VERSION     DATIML010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6122
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4348492"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..661
                     /locus_tag="VLJ38_01430"
     CDS             158..661
                     /locus_tag="VLJ38_01430"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HSU38186.1"
                     /translation="MANTTVIVETPGRTAAKYAYDPESKAFVLKRLLPVGMILPYDFG
                     FVPGTCAEDGDPLDAMVLSEVQTFPGCHIDCRVIGAVTATQTEPQEAKPFRNDFLLVV
                     PQESVLWTEVNELSQLPQAFVDQLERFFQGYHAMQREVFVPLERLNAAAAAGLIERTR
                     RALKQSA"
     gene            868..1239
                     /locus_tag="VLJ38_01435"
     CDS             868..1239
                     /locus_tag="VLJ38_01435"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HSU38187.1"
                     /translation="MATRKTGSRSRSSTKSSSRSGTKSRSKSSTKSRGRASSGRRYGN
                     KASSKVEENMHEMKRGQLRSGRSGKKVTNRKQAIAIGLSEARRAGGKVPPRKSARKTG
                     RKTARKTSGGGRGRSSRSRAE"
     gene            complement(1272..3251)
                     /locus_tag="VLJ38_01440"
     CDS             complement(1272..3251)
                     /locus_tag="VLJ38_01440"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HSU38188.1"
                     /translation="MDTNERRKRMVDLQLRARAIRDERVLAAFASVPREEFLPAELRE
                     FAYTDAPLPIAEGQTISQPYVVALTAEAMQLTGGERVLEIGTGSGYAAAILSQLAQRV
                     YTVERLMPLGQAASETLSRLGYDNVEVSCRDGTLGWPEHAPYDAIAVAAGGPDVPSAL
                     LDELAVGGRLVMPVGPEADQVLVRVTREADGHFRRETLSQVRFVPLIGEQGWSEAAGA
                     HARSGAAPEAETVTRLVRAAAEPLDLAEPNLDGLLERIDGARLVLLGEATHGTSEFYR
                     LRARISQALIERLGFDFVAVEADWPDAAQLDRYALGRPLGRVDDFLPFSRFPTWLWRN
                     EETRAFIGWLREHNLEHGTEVGFHGLDLYSLFASIAAVLAYLTEVDPDAVPAARARYG
                     RLTPWQSDPAAYGRAVIAGRYDSSEQAVVAMLRDLLARRIQYTAADGERFFDAAQNAR
                     VVANAEAYYRVMYYGAAAAWNLRDSHMFETLEALLTFYGPNARGVVWEHNSHVGNALA
                     TEMSLRGEHNLGELCRRRYGDAVYALGFGTDHGTVAAAADWDEPLEIMTVLPSHPDSY
                     ERVFHDSGIPAFLLPLRTAKNSAVRAALEAARLERAIGVVYRPQTERASHYFRAALPH
                     QFDEYAWFDETRAVTPLAGSTSASGEASDLYPFGL"
     gene            complement(3292..>6122)
                     /locus_tag="VLJ38_01445"
     CDS             complement(3292..>6122)
                     /locus_tag="VLJ38_01445"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSU38189.1"
                     /translation="SNWSWDAVANAHYWHRFFSHQPDLNFEHPEVREAMLRVVDHWFE
                     LGVDGMRLDAVPYLYEREGTTCENLPETHSFLKELRAHIDAKFEGRMLLAEANQWPED
                     AAAYFGAGDECHMAFHFPIMPRLFMALRMEDSYPIADILEQTPVIPEACQWAIFLRNH
                     DELTLEMVTEEERDYMVQRYARDRQTRINLGIRRRLAPLLQNDRRSIELMNALLLSMP
                     GAPVIYYGDEIGMGDNAYLGDRNGVRTPMQWSPDRNGGFSRANPQRLILPAIIDPEYS
                     YETVNVEVQQSNSSSLLWWMKRAIALRKQHPTFARGSLRILAPENRKVLAFVREDPQE
                     TLLVVMNLARAPQWVELELAEFKGVRPLELFGNIDFPPISERPYLLTLAGHDVFWFSL
                     SRAVQTKNSEPPSLPFTAPVLERASTEPHVLLRPGSPLEGTLLHYMPLQRWFRNKARR
                     LVRARLFDAVPLLGSHEVFLLFVETSFDEGEPEVYVLPVAFEQSETQPNGGLLGLRSL
                     ANPGTTMWIVDAAGQGRVGQALHALAAGEHVLSGSVVELTGIRTAPIPSSEPAVNSSR
                     ALGAEQSNSSFRIGQDFAGKLMRKLDEGTSLEVRVLEHLSRAPVKPRVPELIARIDVD
                     LRRGSPSTLWLSETYVQNEGDAWGVTVDAVQRFYERVLSSHREEEPVLPATGSVNLLL
                     EPPPLVNDLLAEHLPLVKLLGTRTAELHVSLAHDQVHAAFAPRPHTALSQRSFYQSLR
                     NLNARTFDKLASAVLAPEARDLAERLRAKKRELSRRIDRLLTTRLGGRLMRVHGDYHL
                     GQVLYTGRDFYIVDFEGEPARSRSDRERLRSPLADIAGMLRSFHYAAFGALTGELSGS
                     QVRETDRAVLTRWASFHERWASATFLAAYLEGMAATDLLPAPGHELDLELEVHLLEKA
                     LYEVGYELDARPRWVELPLRGLLDVLGD"
BASE COUNT         1048 a         1961 c         2142 g          971 t
ORIGIN      
        1 tcgacctgct cggagcggcc gagccacatc gcgacgaatg aggcgatcgt gagcggggcg
       61 tctcgcttgg gggccggccg caacgctcgg gcgccgcttt aaaggcgcgc gcggctggcg
      121 tgagccatgc aattccgaac gcggaggcat ccgagccatg gctaacacga ccgtcatcgt
      181 cgaaacccca gggcgcacgg ccgccaaata cgcctatgat ccggagagca aggccttcgt
      241 gctgaagcgc cttttgccag tcggcatgat cctcccctac gacttcggct tcgtgccggg
      301 gacgtgcgcc gaggacggcg acccgctcga cgccatggtg ctgtcggagg tgcagacgtt
      361 tcccggctgc cacatcgact gtcgcgtgat cggcgccgtc acggcaacgc agaccgagcc
      421 gcaggaagcg aagccgtttc ggaacgattt tttgctcgtc gtaccgcaag agtccgtgct
      481 gtggaccgag gtgaacgagc tctcgcagct gccgcaggcc tttgtcgacc aactcgagcg
      541 gttctttcag ggctatcacg cgatgcagcg cgaggtgttc gtgccgctcg agcggctcaa
      601 cgccgcggcg gcggccgggc tcatcgaacg gacgcgacgt gcgttgaagc agtccgcgta
      661 attcagcgtt tcgacacgtt tctgacacgt cgtggcgcaa aggaacgcgt cggccctgca
      721 tgcgagagca cggcgagggc ccgcgaaggt gcgcgtgaat gcgcgtgaat gcgcgtgaat
      781 gcggctgcag ttgcggcgct gcgcagcgaa gtactttttc cgtcacgtag cggacggcag
      841 gcacgttcat tgctgacgaa cgcgcgcatg gctacacgca aaacagggtc acgttccaga
      901 agcagcacga agtcgagctc gcgaagcggc acgaagtcac gttcgaaaag cagcacgaag
      961 tcacgcggcc gagcgagctc tggacggcgc tacgggaaca aggcgtcctc gaaggtcgaa
     1021 gagaacatgc acgagatgaa gcgcggtcag ctccgctccg gacgctcggg caagaaggtg
     1081 acgaaccgca agcaggcgat cgccatcggc ctgtccgaag cgcgccgagc cggcggcaag
     1141 gtcccgcccc gcaagtccgc tcgcaagacc ggtcgcaaga ccgcacgcaa gacctcgggc
     1201 ggtgggcgcg gtcggagtag ccgcagccgc gccgagtgag cgacggcggc gctccgtgcg
     1261 cccggctccg ctcacagtcc gaaggggtac aagtccgatg cttcaccgct cgccgaggtg
     1321 gacccggcga gcggcgtgac ggcgcgtgtt tcgtcgaacc aggcgtactc gtcgaactgg
     1381 tgcggtaacg cggcacgaaa atagtgactc gcgcgctccg tctgcggccg gtagacgacg
     1441 ccgatcgcgc gttcgagccg cgcggcttcg agcgcggcgc gcacggcgct atttttcgcg
     1501 gtgcgcagcg gcaacaggaa ggccgggatg ccgctgtcgt ggaacacgcg ctcgtagctg
     1561 tccggatggc tcggcaaaac agtcatgatt tccagtggtt cgtcccagtc cgccgcggcg
     1621 gccaccgtgc cgtggtcggt gccgaagccg agcgcgtaga cggcgtcgcc gtaacggcga
     1681 cgacagagtt cgccgaggtt gtgctcgccg cgcagcgaca tctccgtcgc gagcgcattg
     1741 ccgacgtggg agttgtgctc ccagacgacg ccgcgcgcgt tcgggccgta gaaggtgagc
     1801 agcgcttcga gcgtctcgaa catgtgcgag tcgcggagat tccacgcggc tgccgcgccg
     1861 tagtacatca cgcggtaata cgcctccgcg ttcgcgacca cgcgcgcatt ctgagcggcg
     1921 tcgaagaagc gctcgccgtc cgccgccgtg tactggattc gccgcgcgag caaatcgcgt
     1981 agcatcgcga ccaccgcttg ctcggagctg tcgtagcgac cggcgatgac ggcgcggccg
     2041 taggctgccg ggtcgctttg ccacggcgtg agccggccgt aacgagcgcg cgcggcgggc
     2101 acggcatccg gatcgacctc ggtgaggtac gcgagcacgg cggcgatcga ggcaaagagg
     2161 ctgtagaggt cgaggccgtg aaagccgacc tcggtcccgt gttcgaggtt gtgctcgcgc
     2221 agccagccga tgaaggctcg ggtttcttcg ttgcgccaga gccaggtggg aaagcgcgaa
     2281 aacggcagga aatcgtccac gcgacccagc gggcggccga gggcgtagcg gtcgagctgc
     2341 gccgcgtcgg gccaatccgc ttcgaccgcg acgaaatcga agccgagcct ttcaatcaag
     2401 gcctggctga tgcgagcgcg cagtcgataa aattcgctcg tcccgtgcgt cgcttcgccc
     2461 agtaaaacga gccgcgcacc gtcgatgcgc tcgagtaagc cgtcgaggtt cggctccgcg
     2521 aggtcgagcg gctcggcggc ggcacgcacg aggcgcgtga ccgtttcggc ctcgggtgcc
     2581 gcgccgctgc gcgcgtgtgc tcccgccgct tccgaccagc cctgctcacc gatgagaggc
     2641 acgaagcgca cctggctcag cgtttcgcgc cgaaaatggc cgtccgcctc gcgcgtcacg
     2701 cgcacgagca cttggtccgc ctcgggaccg accggcatga cgaggcgccc cccgacggcg
     2761 agctcgtcga gcagcgcgct cggcacgtcg ggaccgcccg ccgcgacggc gatggcgtcg
     2821 tagggtgcgt gctcgggcca gccgagcgtc ccgtcgcgac aactcacttc cacgttatcg
     2881 tagccgagcc gcgaaagcgt ctcgctcgcc gcttgcccga gcggcatcag tcgctccacc
     2941 gtgtaaacgc gctgggcgag ctggctcaga atagccgccg cgtagcccga gcccgtgccg
     3001 atttcgagca ctcgctcgcc gcccgtgagc tgcatggcct cggccgtgag cgccacgacg
     3061 tacggctgcg aaatggtttg gccctccgcg atcggcagcg gcgcgtccgt gtaggcgaat
     3121 tcgcgcagct cggcgggcag gaactcctcg cgcggcacgc tcgcaaaagc cgcaagcacg
     3181 cgctcgtcgc gaatggcccg cgcgcggagt tgtaggtcga ccatccgctt gcgtcgttcg
     3241 ttcgtgtcca tcacggacct ccgtgctcgt gtttcgcgaa gtgcgcgacg cctagtcgcc
     3301 gagcacgtcc aagagcccgc gcagcggtaa ctcgacccag cgcggccgcg cgtcgagctc
     3361 gtagccgacc tcgtagagcg ccttttcgag caggtgcacc tcgagctcga ggtcgagctc
     3421 gtggccggga gcaggcaaca aatccgttgc cgccatgccc tcgagataag ccgcgaggaa
     3481 cgtggcgctc gcccaacgct cgtggaagga ggcccagcgc gtgagcacgg cgcggtccgt
     3541 ttcgcgcacc tggctgccgg agagctcacc cgtgagcgcg ccgaaggccg catagtgaaa
     3601 agagcgcaac atgccggcga tgtcggccag gggagaacgg agccgctctc gatccgagcg
     3661 gctgcgcgcg ggttcgccct cgaaatccac gatgtaaaaa tcgcggcccg tgtagagcac
     3721 ctggcctaaa tggtagtcgc cgtgcacgcg cattaggcgg ccgccgaggc gcgtcgtgag
     3781 cagccgatcg atgcgccggc tgagctcgcg cttcttggcg cggagccgct cggcgaggtc
     3841 acgcgcttcg ggggcaagca cggccgacgc gagcttatcg aaggtgcgtg cgttcaggtt
     3901 gcggagcgac tgataaaacg agcgctgcga gagcgcggtg tgcggcctcg gcgcgaacgc
     3961 cgcgtgcacc tggtcgtgtg ccagggagac gtgaagctcg gcagttcgcg tcccgagcag
     4021 cttgacgagc ggcagatgtt cggcgagcag gtcgttgacg agcggcggtg gctcgaggag
     4081 caggttcacg ctgccggtcg cgggcaacac gggctcctcc tcgcggtgtg agctgagcac
     4141 gcgctcgtaa aagcgctgca cggcgtcgac cgtgacgccc caagcgtcgc cctcgttctg
     4201 cacgtacgtt tccgaaagcc agagcgtcga ggggctgccg cgtcgcaaat cgacgtcgat
     4261 gcgcgcgatg agctcgggca cgcgcggctt cacgggagcg cgcgacaggt gctcgagcac
     4321 gcggacttcg agcgaggtgc cctcgtcgag cttgcgcatg agtttacccg caaaatcctg
     4381 cccgatccga aaggagctgt tgctctgctc ggcgccgagg gcgcgcgagg aattgacggc
     4441 cggctccgac gacggaatgg gcgccgtgcg gatgccggtg agctcgacga ccgagccgct
     4501 caagacgtgc tcgcccgcgg cgagggcatg cagtgcttgt ccgacgcgcc cctgaccggc
     4561 ggcgtcgacg atccacatcg tggtccccgg gttcgcgaga gagcgcaggc cgagcaggcc
     4621 gccgttcggt tgggtttcgc tctgctcgaa cgcaaccggc aagacgtaca cttccggttc
     4681 gccttcgtcg aaagacgtct cgacgaagag gaggaatacc tcgtggctgc cgagcagcgg
     4741 caccgcgtcg aacaggcgcg ctcgcacgag ccggcgcgcc ttgttgcgga accagcgctg
     4801 gagcggcatg tagtggagca gcgtgccctc gaggggcgaa ccaggcctga gcaagacgtg
     4861 cggctccgtg ctcgcgcgct cgagcaccgg cgccgtgaac ggcaggctcg gcggctccga
     4921 attcttcgtc tgcacggcgc gcgacagcga gaaccagaac acgtcgtgcc ccgcgagcgt
     4981 gagcaggtag ggacgctcgg aaatcggcgg aaagtcgatg ttgccgaaga gctcgagcgg
     5041 acggacgccc ttgaactcgg cgagctcgag ctcgacccac tgcggcgcgc gcgccaggtt
     5101 catcacgacg agcagcgtct cttggggatc ttcgcgcacg aacgcgagca ccttgcgatt
     5161 ctcgggcgcg aggatgcgga ggctgccgcg cgcgaaggtc ggatgttgtt tgcgcagcgc
     5221 aatggcgcgc ttcatccacc agaggagcga actcgagttg ctctgttgca cctcgacgtt
     5281 gacggtctcg tagctgtact cgggatcgat gatggcgggt aggatcagtc gttgcgggtt
     5341 ggcgcgcgaa aagccgccgt tgcggtcggg gctccactgc atgggcgtgc gcacgccgtt
     5401 gcgatcgccg aggtaggcgt tgtcgcccat cccgatctcg tcgccgtagt agatgacggg
     5461 cgcgcccggc atcgagagca agagcgcgtt catgagctcg atgctgcggc ggtcgttttg
     5521 caagagcggc gcgagccggc gccggatgcc gagattgatg cgggtttggc gatcgcgcgc
     5581 gtagcgctgc accatgtagt cgcgctcttc ttccgtgacc atttcgagcg tgagctcgtc
     5641 gtggttacgt agaaaaatcg cccactggca cgcttcgggg atcaccggcg tctgctcgag
     5701 gatgtcggcg atggggtagc tgtcctccat cctgagggcc atgaacagac gcggcatgat
     5761 gggaaagtgg aacgccatgt ggcattcgtc acccgcgccg aagtaagcgg ccgcgtcctc
     5821 gggccattga ttggcttccg cgagcagcat gcgaccttcg aatttcgcgt cgatgtgagc
     5881 gcggagctcc ttcaaaaacg agtgcgtctc gggcaagttt tcgcaggtcg tgccctcacg
     5941 ctcgtagagg tagggcacgg cgtcgaggcg catgccgtcc acaccgagct cgaaccaatg
     6001 gtctacgacg cgcagcatcg cctcgcgcac ctcggggtgc tcgaagttga gatcgggctg
     6061 atgcgagaag aagcgatgcc agtaatgcgc attcgccacg gcgtcccagc tccaattcga
     6121 gg
//
LOCUS       DATIML010000085         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_306832, whole genome shotgun sequence.
ACCESSION   DATIML010000085 DATIML010000000
VERSION     DATIML010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306832"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1397
                     /locus_tag="VLJ38_01450"
     CDS             <1..1397
                     /locus_tag="VLJ38_01450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38190.1"
                     /translation="HAPRRARFAEDPAPLALALGLAVREPGVEVKPGVGTPRSLLTKL
                     ATRFGKDPDRVAFVAALSRAIGLWDPSAIGIASPPGALAVADLAHALFQAWRRGGAWD
                     EARPDGEVLRAPPEARESSACGVVRELVLEALQELSDGRWVPWEAVAAYVRSDSRTPG
                     VRRLVERWAQRSALEALLPEEIARRIGLGSLHLLGVVDIGDPDDEESIGPTLRITPRG
                     RAYLREGSDSRPPGEPSRFLDHQALRIGSAAQTGSIIALAPLVEIGAVGSALDVLVTP
                     QALARALSAGFEAEVLQARLEVLAQLPDPIARSFAQASAVVGRAEFVATAGFMWVEDP
                     EVRELLRTRRQTADLFVDPSPPSGLLVQAGVELERLARRCRSLGVELIVGGTPYRTRS
                     VPPGKTSGSGARRLESSGTLPALRAARVPSSARQAATRASSSTREAARAAETVSGRTG
                     TVDDEPEKKRGAGE"
BASE COUNT          183 a          551 c          555 g          234 t
ORIGIN      
        1 atcacgcgcc gcgccgcgcc cgtttcgccg aagatccggc cccgctcgcg ctcgcgctcg
       61 gcctggccgt gcgcgaaccc ggcgtcgaag tgaagcccgg cgtcggcacg ccgcgctcgc
      121 tcctcacgaa gcttgcgacc cgcttcggca aagatcccga ccgcgtcgcc ttcgtcgcgg
      181 cgctcagtcg cgcgattggc ctctgggatc cgtcggcgat cggcatcgcc tcgcccccgg
      241 gcgcgctcgc cgtggccgat ctggcacacg cgctctttca agcttggcgc cgcggcggcg
      301 cttgggacga agcacggccc gacggtgagg tgctgcgcgc gccgcccgaa gcgcgtgagt
      361 cgagcgcctg cggcgtcgtg cgcgagctcg tgctcgaggc gctgcaagag ctctcggatg
      421 gccgctgggt cccgtgggaa gcggtcgccg cttacgtgcg ttccgattcg cgcacgcccg
      481 gcgtgcggcg gctggtcgaa cgttgggcgc aacgctcggc gctcgaggcg ctcttgcccg
      541 aagagatcgc ccgccgcatc ggactcggca gcttgcacct gctcggcgtc gtcgacatcg
      601 gcgatcccga cgacgaggag tccatcggcc cgacgttgcg catcacaccg cgcggtcgcg
      661 cctacttgcg tgagggctcg gattcgcgtc cgcccggcga gccgagccgt tttttggatc
      721 atcaagcgct gcgcatcggc tcggcggcgc agaccggctc gatcatcgcg ctcgcgccgc
      781 tcgtcgagat cggcgccgtg ggcagcgcgc tcgacgtgct cgtgaccccc caggcgctcg
      841 cgcgcgccct gagcgcgggc ttcgaagccg aagtgctcca ggcccggctc gaagtgctcg
      901 cgcagctgcc cgatccgatc gcgcgttcgt tcgcacaggc aagcgcggtc gtcgggcgcg
      961 ccgagttcgt cgcgacggcg gggttcatgt gggtcgagga tccggaagtg cgggagctct
     1021 tgcgcacgcg gcgtcaaacc gccgatctgt tcgtcgatcc gtcgcctccg tccggcttgc
     1081 tcgtgcaggc gggcgtcgag ctcgagcggc tcgcgcgccg ctgccgttcg ctcggggtcg
     1141 agctcatcgt gggtggcacg ccgtaccgca cccgctcggt gccgcccggc aagaccagcg
     1201 gcagtggggc gcgccggctc gaatcgagcg gcacgttacc ggcgctgcgc gccgcgcgtg
     1261 tgccctcgag cgctcgtcag gccgcgacgc gtgcttcgtc gagcacgcgt gaggcggcgc
     1321 gtgccgccga gaccgtgagc ggccgtacgg gcacggtcga cgacgaaccc gaaaagaagc
     1381 gcggcgccgg cgagtgaagg cctgcatccg cgcgctcgcc gcggtggtgg cggcgcccgt
     1441 attgctcgtc gcagcgcaag ccttggcgca ggcgaacgcg ttcgacgttc ctgccgaatg
     1501 cgggagcgag ctcgagttca gcg
//
LOCUS       DATIML010000086         4502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4059819, whole genome shotgun sequence.
ACCESSION   DATIML010000086 DATIML010000000
VERSION     DATIML010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4502
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4059819"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VLJ38_01455"
     CDS             complement(<1..261)
                     /locus_tag="VLJ38_01455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38191.1"
                     /translation="MGGSDGATNAGEAGEGGAPSAGASEGGAAGTSNVPKDGLSVGKV
                     AVYQAVEVTLRDGTDTALNAPIVAQREALVRVWLAPGTEWTAR"
     gene            704..1162
                     /locus_tag="VLJ38_01460"
     CDS             704..1162
                     /locus_tag="VLJ38_01460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSU38192.1"
                     /translation="MKLSNKGRYAVRALFDIAFYNDGGPTQVKDIAERQAIPPRFLEQ
                     IFQELKRASIVGSKRGPQGGYSLARRPGDIRLGDIVRALEGPITLGDREPGAKRTPPT
                     DSRRVTESMFRDLSTRVEACFDAVTIADLCGRAEELGLRRPGAQRHVYVI"
     gene            1146..2117
                     /gene="cysK"
                     /locus_tag="VLJ38_01465"
     CDS             1146..2117
                     /gene="cysK"
                     /locus_tag="VLJ38_01465"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HSU38193.1"
                     /translation="MSTSSESLPPLKEHPLVYAHVLDLITDTPLVEIRRLDTDVPRAR
                     VLGKLESLNPGGSVKDRICLAMIERAEREGRLRPGGVVIEPTSGNTGIGLALVCARRG
                     YHCILTMPESMSLERRQLLQSFGAELVLTPEAEQMDGAIKKAQELLASTPGAFTPQQF
                     ENPANPEVHYRVTAAEIIHAMGGEPVHAFVASVGTGGTVSGVGRALREHFTGCAVIAV
                     EPESCATISRGERGPTKIQGIAAGFVPKNYDPKVPDEVRLVSDERAYRTKRDLARKEG
                     VLVGISSGANVAIALDLARELGPGKVVVTVLCDTGERYFSLDEYFQS"
     gene            2098..2895
                     /locus_tag="VLJ38_01470"
     CDS             2098..2895
                     /locus_tag="VLJ38_01470"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HSU38194.1"
                     /translation="MSTSRAEVKRPAPQRSEFRAARVLVVGAGGLGCPAALALVDAGV
                     GHVALADDDRVELTNLHRQLLYSEADVGRDKLDVALEALGRRAAPGQTLAAVRTRLLP
                     DNARDLVKDYDLVLEGADNFATKFLAADACHLERRPLVHGAAVRFRATVWSVAADGTP
                     CYRCLFEDVPAADAALTCAEAGVLGPVVGLAGALMADLALDVLAGTPRFGMLYSYDGL
                     RDRFRSVAVAARPNCPLCGPSATISEIDELCYTAVHCRDDGPTIRGV"
     gene            2899..3177
                     /locus_tag="VLJ38_01475"
     CDS             2899..3177
                     /locus_tag="VLJ38_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HSU38195.1"
                     /translation="MITVRIPTPLRTLTGGNEQVEVEGATVREAIEALEKKAPGIRDR
                     LLDDKGVRRFVNVYVGDEDVRFLDGLDTKLSNGTEISIVPAIAGGAAA"
     gene            3178..3462
                     /locus_tag="VLJ38_01480"
     CDS             3178..3462
                     /locus_tag="VLJ38_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38196.1"
                     /translation="MDPYSRQRRLAEIGDAGQARLLAASHRIAGTDGALTELQYLARA
                     GFRAVAIDALAEPQPFAHAELFRHHVTRRQAAGTWRALRAITRILGSPHA"
     gene            3459..4406
                     /locus_tag="VLJ38_01485"
     CDS             3459..4406
                     /locus_tag="VLJ38_01485"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HSU38197.1"
                     /translation="MTRHARSRRLASILDAVGNTPLLRLDGIAPNAPGVEIYLKLEFA
                     NPGGSVKDRPALRMVEDAMKDGRLTPDKTLIDSTSGNTGVAYSLIGAAMGFRVALVMP
                     KNVTKARKDITQAFGTELIFSDPMEGSDGAIRLVKKIVDQDPEKYFYPDQYSNPSNPL
                     AHYYGTAGEILDALGDRITHFATGLGTSGTMMGTTRRLHEHTPRVFCVAIEPAEALHG
                     LEGLKHMASSIVPPIWDDKTPDEIMPITTEEGWDMADKLAATHGLHVGHSTGANVAGA
                     VKLAERAQRERGGGCVVTIAADRGDRYFAPLKWERRYVW"
BASE COUNT          722 a         1649 c         1453 g          678 t
ORIGIN      
        1 gcgcgcggtc cactccgtgc ccggtgcaag ccaaacgcgc acgagcgcct cgcgttgcgc
       61 gacgatcggc gcgttcaacg ccgtgtccgt gccgtcccgt agcgtcacct ccacggcctg
      121 gtaaacggcg actttgccga cactgagccc gtctttgggc acgtttgagg tacccgccgc
      181 tcccccctcg ctcgcgcccg cgctcggcgc tcccccctcg cccgcttcac cagcgttcgt
      241 cgcgccgtcg ctaccgccca cgccgctccg tccacctcgc tcagcgcgcg cgcccgcttc
      301 ggcagcgccg gcatccccgg cgcccgcgtc gctagcggcc gctcccgccg tcccaccccg
      361 agccgcgtcg ccccccgcag ccgctcgccc ggcctcgcac gccggacagc ccgccgtccc
      421 cgcacgcccg gcaaccccgc tcgcgttggc gtgtcccgcg gtcgcttccg gtccgcgcct
      481 gtcggcgacg tgggactcgc ccccgcaatt ggcgatgagc cccgccaccc cgaaccagcc
      541 cagccttcga agcataagcg ccatcagtat ggcgccgcgt cgcgaccgcc cgccagcgcc
      601 gaacctgcct acggtcgaag cgcgcggatt ttcagcgcct tccctcgtgc gatcggttct
      661 tgacaaatcc gatgtaggaa ttagcgtacc cagcgaggcc ccgttgaagc tctcgaacaa
      721 gggtcgctac gcggtccgcg cgctgttcga tatcgcgttt tacaacgacg gcgggccgac
      781 gcaggtcaaa gacatcgccg aacgtcaggc gattccgccg cgctttctcg agcaaatctt
      841 ccaggagctc aagcgcgcca gtatcgtcgg cagcaagcgc gggccgcaag gtggctatag
      901 cctcgcccgc cggccggggg acattcgctt gggcgacatc gtgcgggcac tcgagggtcc
      961 gatcacgctc ggagaccgcg agccgggcgc caagcgaact ccgccgaccg attcgcgacg
     1021 cgtcaccgaa tcgatgtttc gcgacctctc cacgcgggtc gaagcgtgct tcgatgccgt
     1081 caccattgcc gacctgtgcg ggcgagccga agagctcggc ctgcgccgcc cgggagccca
     1141 gcgtcatgtc tacgtcatct gagtccctgc cgccgctcaa ggagcatccg ctcgtttacg
     1201 cgcacgtgtt ggatttgatt accgacacgc cgctcgtcga gatccgccgc ctcgacaccg
     1261 acgtgccgcg cgcgcgcgtg ctcggcaagc tcgagtcgct gaacccgggc ggctcggtca
     1321 aggatcgcat ctgcctcgcg atgatcgagc gcgccgagcg cgagggacgc ctccggccgg
     1381 gcggcgtcgt gatcgagccg acgagcggca atacgggaat tgggctcgcg ctcgtctgcg
     1441 cccggcgcgg ctatcactgc atcctcacca tgccggagag catgagcctc gagcgccggc
     1501 agctgctcca gtcgttcggc gccgagctcg tgctcacgcc cgaagccgag cagatggacg
     1561 gcgcgatcaa gaaagcgcag gagcttcttg cctcgacccc cggcgcgttc acgccgcagc
     1621 aattcgaaaa tcccgcgaac cccgaggtgc actaccgcgt cacggcggct gaaatcattc
     1681 acgcgatggg cggcgagccc gtgcacgcgt tcgtggcgtc cgtcgggacg ggcggcaccg
     1741 tgagcggcgt gggccgcgcg ctccgcgagc atttcaccgg ctgcgccgtg atcgccgtcg
     1801 aacccgaaag ctgcgcgacc atctcgcgcg gcgaacgcgg cccgaccaag atccaaggca
     1861 tcgccgccgg cttcgtgccg aaaaattacg atccgaaagt ccccgacgaa gtgcggctcg
     1921 tgagcgacga gcgcgcctat cgcaccaaac gcgacctcgc gcgcaaagaa ggcgtgctcg
     1981 tcggcatcag ctcgggggcg aacgtcgcta tcgcgctcga cctcgcccgc gagctcgggc
     2041 cgggcaaagt ggtcgtgacg gtgctctgcg acacgggcga gcgctacttc agcctcgatg
     2101 agtacttcca gagctgaagt gaagcgccct gcgccgcaac gatctgagtt tcgtgccgcg
     2161 cgggtgctcg tcgtcggggc gggcggcctc ggctgccccg cggcgctcgc gctcgtggac
     2221 gcgggcgtgg gtcacgtcgc gctcgcggac gacgatcgcg tcgagctcac gaacctgcac
     2281 cgccagctgc tgtacagcga ggcggacgtc gggcgcgata agctcgacgt ggcgctcgaa
     2341 gcactcggac ggcgcgcggc gcccgggcag acgctcgccg cagtgcgcac gcgacttttg
     2401 cccgacaacg cgcgcgacct cgtcaaagat tacgatctgg tgctcgaagg tgccgacaac
     2461 ttcgcaacca agtttctcgc cgcggacgcc tgccacctcg agcggcgacc gctcgtccat
     2521 ggcgccgcgg tgcgctttcg cgcgaccgtg tggagcgtcg cggcggacgg cacgccctgt
     2581 taccgctgcc tgttcgagga cgttccggcg gcggacgccg cgctcacttg cgccgaagcg
     2641 ggcgttttgg gcccggtggt cggactcgcc ggggcgctca tggccgatct cgcgctcgac
     2701 gtgctcgcgg gcacgccgcg cttcggcatg ctctacagct acgacggcct gcgcgaccgt
     2761 tttcgctcgg tcgccgtcgc ggcgcggccg aattgtccgc tctgtggccc gagcgccacg
     2821 atttccgaga ttgacgagct ctgctacacc gccgtccact gtcgcgacga cggccccacc
     2881 atccgaggag tctgagccat gatcaccgtg cgtatcccca cccccctccg gactctcacc
     2941 ggcggtaacg agcaagtcga agtcgaaggc gcgaccgtgc gcgaagccat cgaggcgctc
     3001 gagaagaagg cccccggcat ccgcgaccgg ctgctcgacg acaagggcgt gcgtcgcttc
     3061 gtcaacgtgt acgtgggcga cgaagacgtg cgtttcctcg acggcctgga caccaagctc
     3121 tcgaacggca ccgaaatcag catcgtgccc gcgatcgccg gaggcgctgc cgcgtagatg
     3181 gatccctact cgcgacagcg gcggctcgcc gagatcggcg acgccgggca ggcgcgcctg
     3241 ctcgcggcga gccaccgtat tgcgggtacg gacggcgcgc tcaccgagct ccagtatctg
     3301 gcgcgcgcgg gtttccgcgc cgtggcgatc gacgcgctcg ccgaaccgca gccgtttgcg
     3361 catgccgagc ttttcaggca ccacgtgacc cgccggcaag cagcgggcac ctggcgcgcg
     3421 ttacgcgcca tcaccaggat tttgggaagt ccgcacgcat gactcgccac gctcgttcgc
     3481 gccggctcgc gtcgatcctc gacgccgtcg gcaacacgcc gctgcttcgc ctcgacggca
     3541 tcgcgccgaa cgcgccgggc gtcgaaatct acctgaagct cgagttcgcc aatccgggcg
     3601 gctccgtcaa ggaccggccc gccctacgca tggtagagga cgcgatgaag gatggccggc
     3661 tcacccccga caagaccctg atcgattcca ccagcggcaa cacgggcgtc gcctactcgc
     3721 tgatcggcgc cgccatgggc ttccgcgtgg cgctcgtgat gccgaagaac gtcacgaagg
     3781 cgcgcaaaga catcacgcaa gcgttcggca ccgagctcat cttcagcgat ccgatggaag
     3841 gctccgacgg cgccatccgg ctcgtgaaga agatcgtcga ccaagatccc gagaagtact
     3901 tttaccccga ccagtactcg aacccctcga acccgctcgc ccactactac ggcacggccg
     3961 gggaaatcct cgacgcgctc ggtgatcgca tcacgcactt cgcgacgggc ctcggcacga
     4021 gcggcacgat gatgggcacg acgcggcgcc tgcacgaaca cacgccgcgc gtcttctgcg
     4081 tcgccatcga gcccgccgaa gccctgcacg gcctcgaagg cctgaaacac atggcctcga
     4141 gtatcgtgcc gccgatctgg gacgacaaaa cacccgacga aatcatgccc atcacgaccg
     4201 aagagggctg ggacatggcc gacaagctgg cggcgacgca cggcttacac gtcggccatt
     4261 cgacgggcgc gaacgtcgcg ggcgccgtga agctcgccga gcgcgcccag cgcgagcggg
     4321 gcggcggctg cgtcgtcacg atcgcagccg atcggggcga ccgttatttc gcgccgctca
     4381 agtgggagcg gcgttacgtc tggtgaagcc atgacagagc ccgaatggat tcgcggtcag
     4441 gttcgaattc cggcggcggt gctcgccgag gtggaacgtg ccggcgtcgc tgcctacgca
     4501 cg
//
LOCUS       DATIML010000087         2472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_596489, whole genome shotgun sequence.
ACCESSION   DATIML010000087 DATIML010000000
VERSION     DATIML010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_596489"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1433)
                     /locus_tag="VLJ38_01490"
     CDS             complement(<1..1433)
                     /locus_tag="VLJ38_01490"
                     /inference="COORDINATES: protein motif:HMM:NF018471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipase maturation factor family protein"
                     /protein_id="HSU38198.1"
                     /translation="MADAQAFSPFRPALARNYVLTRSVLLRGLGFIYVVAFAILVRQV
                     EPLIGSRGLLPVAPFLEQVWRHFGGALAFLRLPTLFWLHSSDVTLKLAAWLGLALGAV
                     VLGGFANVPILVLLWALYLSFVHVGQIFYGYGWDILLCETGFLAVFLAPLWRPRLSRS
                     AEPPPVIVIVLFRWLTFRLMLGAGLIKLRGDSCWRDLTCLDFHYETQPNPGPLSYYFH
                     FMPEWTHRAGVLFNHFAEVIAPFGVFGPRRLRIFAGAVIVAFQTILILSGNLSFLNWL
                     TILVALACFDDGVFERVLPAGWRGRVETLRQALGEPSRARRATSFAIAALVGVLSFGP
                     VVNLLSAHQHMNDSFNPFEFVNTYGAFGSIERERHEVVISATLGDPRDEHAVWREYEF
                     PCKPGDVRRPPCLVTPYHYRLDWQMWFAGLSNFEQEPWIVHLAYQLLRGDPLPRTLLA
                     KDPFDGRAPRAVRALLYTYRFTRGRPNG"
     gene            complement(1426..2385)
                     /locus_tag="VLJ38_01495"
     CDS             complement(1426..2385)
                     /locus_tag="VLJ38_01495"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HSU38199.1"
                     /translation="MARIVVLDGHTLNPGDLSWEPLAKLGELEVYARTPDELVLERAR
                     GADVVVTNKTQLDAAFFERTRGLRGVAVLATGYDMVDAAAARAWNVPVSNVPAYSTAS
                     VAQHTLALLLELTSHVGSHALAVRQGEWVKSADFSFWHEPIIELEGLTFGIVGFGAIG
                     QRVALLARALGMRVVATASRRLPAPPAGVEYRPLDVVFAESDVVSLHCPLTPETRELV
                     GPTRLAAMRRSSFLLNTARGALIDEVALARALEQGVIAGAGLDVLTTEPPLEGHPLLS
                     APHCVITPHQAWTSRAARERLLAVTATNVAGFFAGQPQNVVNG"
BASE COUNT          493 a          802 c          864 g          313 t
ORIGIN      
        1 ccgttcggac ggccgcgagt gaagcgatac gtatagagga gcgcccggac agcgcgcggg
       61 gctcggccgt cgaagggatc tttggcgagt agcgtgcgcg ggagcgggtc accccgaagg
      121 agctggtagg ccaagtggac aatccacggc tcttgctcga aattggaaag cccggcgaac
      181 cacatctgcc agtcgagccg atagtggtag ggcgtcacga ggcagggcgg gcggcggacg
      241 tcacccggct tgcacggaaa ctcgtattcg cgccaaacgg cgtgctcgtc gcgcggatcg
      301 cccagggtgg cggagatcac gacctcgtgc cgctcgcgct cgatgctacc gaaagccccg
      361 taggtattca cgaactcgaa cgggttgaac gagtcgttca tgtgttggtg ggcggacagt
      421 agattgacca ccgggccgaa gctcagcacg ccgacgagcg ccgcgatcgc gaagctcgtg
      481 gcacggcgtg cgcgcgatgg ctccccgagc gcttgtcgga gcgtctcgac gcggccacgc
      541 caacccgcgg gcagcacgcg ctcgaacacg ccgtcgtcga agcaagcgag cgccacgaga
      601 atcgtgagcc aattcaaaaa cgagagattg ccgctcagaa tcagaatggt ctgaaacgcc
      661 acgatcacgg cgcccgcgaa gatccggagc ctgcgcgggc cgaacacgcc gaatggcgca
      721 atcacctcgg caaagtgatt gaagagcacg cccgcccggt gcgtccactc gggcatgaag
      781 tgaaagtagt aactgagcgg gccgggattg ggctgcgtct cgtagtggaa atcgaggcac
      841 gtgagatcgc gccagcagga gtcgccccgt agcttgatga gccccgctcc caacatcagc
      901 cggaaggtca gccagcgaaa gagcacgatc acgatgacgg gcggcggctc cgcagagcgg
      961 ctgagccgcg ggcgccacag cggcgccaaa aacacggcga gaaagcccgt ctcgcagagc
     1021 aagatgtccc agccgtagcc gtagaagatc tggccgacat gcacgaagga gaggtaaagc
     1081 gcccagagta ggaccaggat cggcacgttc gcaaagcccc cgagcacgac cgcgccgagc
     1141 gcgaggccga gccaagcggc aagcttgagc gtcacgtccg acgagtgcag ccaaaagagc
     1201 gtcggcagcc gcaggaacgc gagcgctccg ccgaagtggc gccacacctg ctcgaggaag
     1261 ggcgctacgg gcaagagacc acgcgagccg atcaggggct cgacctgacg cacgaggatc
     1321 gcgaacgcaa ccacgtagat gaagccgagc ccgcgcagga gcacgctgcg cgtgagcacg
     1381 taatttcgcg ccagcgcggg ccggaacggg gagaacgcct gcgcgtcagc cattgacgac
     1441 attttgcggc tgtccggcga agaagccggc gacgttcgtg gccgtaacgg cgagcaggcg
     1501 ctcgcgcgcc gcgcggctcg tccaggcttg atgcggcgtg atgacgcagt gtggcgccga
     1561 cagcagcggg tgcccctcga gcggaggctc ggtcgtgagc acgtcgagcc cggcgcccgc
     1621 gatgacgccc tgctcgaggg cgcgagcgag cgccacttcg tcgatcagag cgccgcgcgc
     1681 cgtgttgagc aagaacgacg agcggcgcat ggctgcaagg cgcgtcgggc cgacgagctc
     1741 acgcgtttcg ggcgtgagcg gacaatgcag ggagaccacg tcactctcgg caaagacaac
     1801 gtcgagagga cggtactcga cgcccgcggg cggcgcgggc aagcgccgcg acgccgtcgc
     1861 gaccacgcgc atcccgagcg cgcgcgcgag cagcgcgaca cgctgtccga tcgccccgaa
     1921 gccgacgatg ccgaaggtga gcccctcgag ctcgatgatg ggctcgtgcc agaacgaaaa
     1981 atcggcgctt ttgacccact ccccctgccg cacggcgaga gcgtgcgagc cgacgtgaga
     2041 ggttagctcc aaaaggaggg cgagcgtgtg ttgggcgacg ctcgccgtcg agtaggcggg
     2101 cacgttcgag accggaacgt tccacgcgcg cgccgccgcg gcgtcgacca tgtcgtaccc
     2161 cgtcgcgagc acggccacgc cgcgtaaacc ccgcgttcgc tcgaagaacg ccgcgtccag
     2221 ttgggtcttg ttggtgacta cgacgtcggc gccgcgcgcc cgctcgagca cgagctcgtc
     2281 cggcgtgcgc gcatacacct cgagctcacc gagcttcgcg agcggctccc acgacagatc
     2341 accgggattg agcgtgtgac cgtcgagcac cacgatgcga gccatacgcc tggagcgtac
     2401 cctcttgcac gcgcggagcc gcccgatcgt cggcgggatt taacgccgcg tgctcacgac
     2461 ggccgcgcgg ct
//
LOCUS       DATIML010000088         1568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4927561, whole genome shotgun sequence.
ACCESSION   DATIML010000088 DATIML010000000
VERSION     DATIML010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4927561"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VLJ38_01500"
     CDS             complement(<1..1275)
                     /locus_tag="VLJ38_01500"
                     /inference="COORDINATES: protein motif:HMM:NF023128.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU38200.1"
                     /translation="MLERLGLHRPELRAWASYDWAVSAMQTTIMAAVFPIYFVKVASA
                     GLAPGRGAQQLAFANTIALVLVTVLSPLLGALADHSAAKKRLLAAFAFIGAAACAGMF
                     WIGEGDVTLASVLYSIAMIGAQGSMAFYGALLPHIARDDEMDRVSTAGYAIGYIGGGI
                     LLALNLLWITRPALFGLPSGPGLTPTQATLPTRLALASVAVWWLVFTIPILRGVPEPP
                     ATREPGESGTGSLLAPFVRLGHTLHELRGFKQAALLLVAFMIYNDGIQTIIKMATAYG
                     TELGISQSALITAIMIVQFTGVPCAFAFGALAARIGAKRAVMGGLVAYMVIAVLAFYM
                     KTATHFLLLALLVGLVQGGTQALSRSLFANMVPPHRSGEFFGFYGVFEKFSGIFGPLL
                     FALVIAFGGTSRHGILSVILFFIIGIALLSRVD"
BASE COUNT          268 a          548 c          543 g          209 t
ORIGIN      
        1 gtccacgcgc gagagcagtg cgatcccgat gatgaagaag aggatcaccg agaggatgcc
       61 gtgccggctc gtgccgccga acgcgatgac gagcgcgaag agcagcgggc cgaagatccc
      121 cgagaatttc tcgaacacgc cgtagaagcc gaagaactcc cccgagcggt gcggggggac
      181 catgttcgcg aacagcgatc ggctcaacgc ctgcgtgccg ccctgcacga gcccgacgag
      241 cagggcgagg agcaggaagt gcgtcgccgt cttcatgtag aacgcgagca cggcgatgac
      301 catgtacgcc acgagcccgc ccatcacggc ccgcttcgcc ccgatgcgcg cggcgagcgc
      361 gccgaacgcg aaggcgcacg gcacgccggt gaactgcacg atcatgatcg ccgtgatcag
      421 cgcgctctga ctgatcccga gctccgtgcc gtacgccgtc gccatcttga tgatcgtctg
      481 gatgccgtcg ttgtagatca tgaacgcgac gagcagcagc gccgcctgct tgaagccgcg
      541 cagctcgtgc agcgtgtggc cgagccgcac gaacggtgcg agcagcgagc ccgtgccgct
      601 ctcgcccggc tcgcgcgtcg ccggcggctc cggcacgccg cgcaggatcg ggatcgtgaa
      661 gacgagccac cacaccgcga cgctcgccag cgcgagccgc gtcggcaacg ttgcctgcgt
      721 cggcgttagg cccggcccgc tcggcaggcc gaagagcgcg gggcgcgtga tccacagcag
      781 gttgagcgcg agcaggatgc cgccgccgat gtacccgatc gcgtagccgg ccgtcgacac
      841 gcggtccatc tcgtcgtcgc gcgcgatgtg cgggagcagc gcgccgtaga acgccatgct
      901 cccctgcgcg ccgatcatcg cgatcgagta gaggacgctg gcgagcgtca cgtcgccctc
      961 gccgatccag aacatccccg cgcaggcggc cgcgccgatg aaggcgaacg ccgcgagcag
     1021 ccgcttcttc gccgcggagt ggtcggcgag cgcgccgagc agcggggaga gcaccgtcac
     1081 gaggacgagc gcgatcgtgt tcgcgaacgc gagctgctgc gcgccgcggc ccggcgccag
     1141 cccggcgctc gccaccttca cgaagtagat cgggaagacg gcggccatga tcgtcgtctg
     1201 catcgccgac acggcccaat catacgatgc ccacgcccgg agctcgggac ggtggagacc
     1261 cagacgttcg agcatgtcct cgccctttct cggcgctgcg tgacgcgtcg cgcgcaggat
     1321 ccctgcgcgc cgcgcggcca acttaccacg tcgccggcgg ggcgcccatg cccgggctcg
     1381 tcgaggtgtc gcacggcatg ctctcctcag ggccattcgg gtctcacacg gaggcacgga
     1441 ggacacggag ccggtgcgct tcctcgggct gttcgtgaat cacacataga cgcagagcac
     1501 gcagagcggg tgcccttcga cgagccaggc gctgcgtgct ctgcgtctct gagtgagact
     1561 cgccgagg
//
LOCUS       DATIML010000089         4418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3483427, whole genome shotgun sequence.
ACCESSION   DATIML010000089 DATIML010000000
VERSION     DATIML010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3483427"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1215)
                     /locus_tag="VLJ38_01505"
     CDS             complement(<1..1215)
                     /locus_tag="VLJ38_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38201.1"
                     /translation="MSRVVYFRAGVRFDASPLDYFAQLLDRELLRDRLAESLFYLHSQ
                     PPLYNLLVGVALKLAPEHPAWVLWPVFMSAGLYAALCLYVVALHLRVPVPVAALATAA
                     VAASPLYVIYENWCFYPSLNVAWIAGAGAWLARSQGRPGPALAIAAAHLGGLCLTRSL
                     FHPLFFVLAAALVVAFARVGTRRRVLACFAGPALLLCALCAKNLVLFDFFGTSSWASR
                     NLWRAVTCVLGPERVQAQRANLSPAVDLSAFEPGDRNISAFHLKHRHTGVPALDRVAK
                     RNRVAKRNPSTLPDNYDHWSIPASAHFYAEDAMRLVRAYPREYLRGTLALSVPRFFDQ
                     MDQGFTDPNHNQLARAADAFDHFEQERRTHLVVAFGLLFAFGLLVARGVPRSTRLLLA
                     FSALVLSWVTLVG"
     gene            1520..2341
                     /locus_tag="VLJ38_01510"
     CDS             1520..2341
                     /locus_tag="VLJ38_01510"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSU38202.1"
                     /translation="MLLVKSDENIEAGGLPSQEELAQMARFNEEMLAAGVTLGGEGLH
                     PSSRGARVRLTPRGFDVIDGPFAEAKELIAGYWLLRTASREQALDWLRRVPARDGSVE
                     LRPLYDTEDFPVDASEQAGGWREQELAAREAAEAATPPRKPGTKRFILMLKADARTES
                     GALPSEEVLTKMGTLMEEGVRTGALLAGDGLKPSGAGARLRVAGGKASTVDGPFTESK
                     ELIAGYTLLQLPSLREAVAFAKRWLEVHRLVGVPEAEIEVRELMEPDEVPRVSPA"
     gene            complement(2349..4136)
                     /locus_tag="VLJ38_01515"
     CDS             complement(2349..4136)
                     /locus_tag="VLJ38_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38203.1"
                     /translation="MKGAPRSIDQRPLDFALVRRLYTYTRPHARLRNRLLCMVLLRSV
                     QLPLVTWATAAIISGPVAQHSALGTLRGVLGLLALAAFTELCFVYRARYALELGEVVV
                     HDLRNDIYAALLCMPIAFFKRTPIGRLLGRATSDVDIVRTGVQDVAFVTVVQLGNLLV
                     SAALMLFYDWQLFLVVLAMAPVLYAIVRHFRRALSRAYRAQQESFSRVTAQLAESVTG
                     IREIQGFVRQSLNGELFAELIRDHSRYNYDAAKQSAVFQPLLELNGQLFLAILLVIGG
                     YQALGAHVPLNALIQFLFLSNAFFGAIPNLGTQYNQALTAMAGAERVFALLDQKPDWQ
                     DEPSATDLPALAGRVEFRDVSFAYDPGRPVLSNVSFAAEPGQTVALVGPTGGGKTTIM
                     SLVAKLYLPTHGHVLVDAHDLAHATSNSLHRQIASVTQENFLFSGSVRDNLRLGKPEA
                     TDAEIREAARALDVLDVFLDLPHGFETQVGERGAGLSLGQRQIVCFVRAMLADPRILL
                     LDEATSSVDALTEARVQAALGRLLTGRTSFVVAHRLSTIRHADLVLVLDAGRIVERGS
                     HRELLRRGGRYAELYREFASMVELEALRS"
     gene            complement(4133..>4418)
                     /locus_tag="VLJ38_01520"
     CDS             complement(4133..>4418)
                     /locus_tag="VLJ38_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38204.1"
                     /translation="LLDDPTAAVDTKTESEVLEAIDAARTGRTTILVANRMATLRRAD
                     RVLVLADGRLVEQGTHDELMLRRGLYFRAAALQAPDAESIKLLAAHTESA"
BASE COUNT          823 a         1392 c         1596 g          607 t
ORIGIN      
        1 cccgacgagc gtgacccagc tcagcacgag cgcactaaaa gccagcaata ggcgcgtcga
       61 tcgcggcacg ccacgcgcga ccagcaagcc gaacgcgaat aggaggccga acgccacgac
      121 gagatgcgtg cgtcgctcct gctcgaaatg atcgaacgca tcggctgcgc gcgcgagctg
      181 gttgtggttg ggatccgtaa acccttggtc catctggtcg aagaagcgcg gcacgctgag
      241 cgcgagggtg ccgcggagat actcgcgcgg gtaggcgcgc acgagtctca tagcgtcctc
      301 cgcgtagaag tgcgccgacg cggggatcga ccagtggtcg tagttgtcgg gcagagtcga
      361 cggattgcgc ttggcgacgc gattgcgctt ggcgacgcga tcgagcgccg gcacgccggt
      421 gtggcggtgc ttgagatgga aggccgagat gtttcgatcc ccgggctcga acgcgctgag
      481 gtcgaccgcc ggcgagaggt tcgcgcgctg ggcttggacc cgttcgggac cgagcacgca
      541 tgtcacggcg cgccagagat tgcgcgaggc ccaggacgaa gtgccgaaga agtcgaaaag
      601 cacgaggttt ttcgcgcata gcgcgcacag caagagcgcc ggtccagcaa agcacgcgag
      661 cacgcggcgc cgcgttccga ctcgcgcgaa cgcgacgacg agcgctgcag cgagcacgaa
      721 gaagaggggg tggaacagac tacgcgtcag gcacaagccg ccgaggtgtg cggcggcgat
      781 ggccagcgcc ggccccgggc gtccctgact tcgcgcgagc cacgcgccgg ctcctgcgat
      841 ccaagccacg ttgagcgagg ggtaaaagca ccagttctcg tagatcacgt agagcggtga
      901 cgcggcgacg gcagcagtcg caagcgccgc caccgggacg ggcacccgca agtgcagcgc
      961 gacgacgtac aggcacaacg cggcatacag gcccgcgctc atgaacaccg gccacagtac
     1021 ccaggcgggg tgctccggcg cgagcttcag cgcgacgccg acgagcagat tgtagagagg
     1081 cggctgcgag tgaagataga agaggctctc tgccaaacga tcgcggagca actcgcgatc
     1141 gaggagctgc gcgaagtaat cgagaggcga ggcgtcgaac cgcacccccg cgcggaaata
     1201 gacaacgcgg ctcaccgcga acgcgacgcc gacaaaaaat gcacccagta cgcccgcact
     1261 cccacgacca accacggcct cgagatagca cgtgagaaca tggccggttg ccggcgctcg
     1321 ggcctgccgg cgccaggcac gggcaaaaac cccgtattcc gcgaggtttg cgcgggcacg
     1381 caaaaaatcc gtgcggcgtg tcgatcccgc ccggtcagat tcgtcgtctg gatgcgccgg
     1441 acgaacaccc ggctgtcaca ggactggcag agtcttggcg ggccagatca cgtaacaaag
     1501 gaacaaatcg atgcgctgca tgctgctggt gaaaagcgac gaaaacatcg aagccggagg
     1561 gctgccgagc caggaggagc tcgcgcagat ggcgcgcttc aacgaggaaa tgctggccgc
     1621 gggcgtgacg ctcggcggcg aagggctgca tccgagctcg cgaggggcgc gcgtacgcct
     1681 cacgccgcgc ggcttcgacg tgatcgatgg gcctttcgcg gaagccaaag agctcatcgc
     1741 cggctattgg ctgctccgca cggcgtcgcg tgagcaagca ctcgattggc tccggcgcgt
     1801 gcctgcgcgc gacggcagcg tcgagctccg gccgctctac gacaccgagg attttccggt
     1861 cgacgcgagc gaacaggcgg gcggctggcg cgagcaggag ctcgccgcgc gcgaggccgc
     1921 cgaggccgcc acgccaccac gcaagcctgg aacgaagcgc tttattttga tgctcaaggc
     1981 cgacgcgagg acggagtccg gcgcgctgcc gagcgaagag gtgctcacga agatgggcac
     2041 gctgatggag gaaggcgtgc gcacgggcgc gctcctcgcg ggtgacgggc tcaagccgag
     2101 cggggcggga gcgcggttgc gcgtcgcggg cggcaaggcg agcaccgtcg acggcccctt
     2161 caccgagagc aaggagctca tcgcgggata cacgctgctt cagctcccgt cgctccgcga
     2221 agccgtcgcg ttcgcgaagc gctggctcga agtgcatcgg ctcgtcggcg tgccggaggc
     2281 cgagatcgag gtgcgggagc tgatggagcc cgacgaagtg ccgcgcgtca gcccggcgtg
     2341 acgcgcgctc acgaccgcag cgcctcgagc tcgaccatgc tcgcgaattc gcggtagagc
     2401 tcggcgtagc ggccaccgcg ccgcaaaagc tcgcgatgtg agccgcgttc gacgatgcga
     2461 ccggcgtcga gcacgagcac caggtcggcg tggcgaatcg tactcaggcg gtgcgccacg
     2521 acgaaactcg tgcgcccggt aagcaaccgg ccgagcgccg cctgcacgcg cgcctccgtc
     2581 agggcgtcga ccgagctcgt cgcctcgtcg agcaagagga tgcgcggatc cgcgagcatg
     2641 gcgcgcacga aacacacgat ttggcgctgg ccgagcgaaa gacccgcgcc gcgctcgccg
     2701 acttgcgtct cgaagccatg cggcaggtcc aggaagacgt cgagcacgtc gagcgcgcgg
     2761 gccgcctcgc ggatctccgc gtccgtggcc tcgggtttac cgaggcgcag gttgtcgcgc
     2821 acgctgccgc tgaagaggaa gttttcctgc gtgacgctcg cgatttgacg atggagcgag
     2881 ttgctcgtgg cgtgcgcgag atcgtgcgcg tccacgagca cgtgcccgtg cgtgggcaga
     2941 tagagcttcg cgacgaggct catgatggtg gttttgccgc cgccggtcgg accgacgagc
     3001 gcgacggtct gacccggctc ggcggcgaag gagacgttcg agagcacggg ccggccgggg
     3061 tcgtaggcga agctcacgtc tcggaattcg acgcggccag cgagtgcggg caaatcggtg
     3121 gcggacggct cgtcttgcca gtcgggcttc tggtcgagca gcgcaaaaac gcgctcggcg
     3181 ccggccatgg cggtgagtgc ctggttgtat tgcgtgccga ggttcgggat ggcgccgaag
     3241 aacgcattcg acaggaacag gaattgaatc agcgcgttca gcggcacgtg cgcgccgagc
     3301 gcttggtagc cgccgatcac caagaggatc gccaggaaga gctggccgtt cagctcgagc
     3361 agcggctgga acacggcgga ttgcttggcc gcgtcgtagt tgtagcggga gtgatcgcgg
     3421 atcagctcgg cgaacagctc gccgttcagg ctttgccgca cgaagccctg gatctcacga
     3481 atgcccgtca cgctctcggc gagctgcgcc gtgacgcgac tgaagctctc ctgctgcgcg
     3541 cggtaggcgc ggctcagcgc acgtcgaaaa tggcgcacga tcgcgtagag gacgggcgcc
     3601 atcgcgagca cgacgaggaa cagctgccag tcgtaaaaga gcatgagcgc cgccgaaaca
     3661 agcaggtttc caagctgcac gaccgtgacg aacgccacgt cttgcacacc ggtgcgcacg
     3721 atgtcgacat cggaagtcgc gcgcccgagc aggcgaccga tcggcgtgcg cttgaagaac
     3781 gcgatcggca tgcagaggag cgcggcgtag atgtcgttgc gcaggtcgtg cacgaccacc
     3841 tcgccgagct cgagcgcgta gcgcgcgcgg tagacgaagc agagctccgt gaaggccgcg
     3901 agcgcgagca ggccgagcac gccgcgcagc gtaccgaggg cgctatgctg cgcgaccgga
     3961 ccgctgatga tcgccgccgt ggcccaggtg acgagcggca actggacgga gcgcaagagc
     4021 accatgcaga ggaggcgatt acggagacgc gcgtgaggcc gtgtgtacgt gtacagccgg
     4081 cgcacgagcg cgaaatcgag cggacgctgg tcgatgctgc gcggcgcgcc cttcatgcgc
     4141 tctccgtgtg tgccgcgagt aatttgatgc tctcggcgtc gggtgcctgc agcgcggcgg
     4201 cgcggaaata cagcccgcgg cgcagcatca gctcgtcgtg cgtgccttgc tcgacgagcc
     4261 ggccgtccgc tagcacgagc acgcgatccg cgcgccggag cgtcgccatg cgattcgcga
     4321 cgaggatggt cgtgcgtccg gtgcgcgcgg cgtcgatcgc ttcgagcact tcgctttcgg
     4381 tcttggtgtc gacggccgcc gtcgggtcgt cgagcagg
//
LOCUS       DATIML010000090         3933 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_596862, whole genome shotgun sequence.
ACCESSION   DATIML010000090 DATIML010000000
VERSION     DATIML010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3933
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_596862"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VLJ38_01525"
     CDS             complement(<1..508)
                     /locus_tag="VLJ38_01525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38205.1"
                     /translation="MLAFSACGGSDGPIAGTGGTSQHGSGGTTSHGSAGQDSTGAAGG
                     DTTGNPGTLGTPTQLTSGSASMTGMTSDDWVLYRLGDELYAQKLGSDADAELVADQPG
                     NTLVRGKVVFNFANVDWTANVGDLSIWTHAGGAQEIGSTTYSETLISASASGKFLVYT
                     ANTNTKKSK"
     gene            complement(614..2230)
                     /locus_tag="VLJ38_01530"
     CDS             complement(614..2230)
                     /locus_tag="VLJ38_01530"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S53 family peptidase"
                     /protein_id="HSU38206.1"
                     /translation="MMPGSHVVLKGSERVALQGAKALGRAPEDEWVEATVKLRRQAAL
                     PAPEPGKAALTREELAQYGASAADERLVAGALAQYGIEIVESNLAQRSLKIGGPVSAM
                     EQAFGTKLVRFAHERGDYRGRTGPLHVPAELDGVIVGVFGLDNRPVVKPRRVATRPRA
                     VSLAKAATRPWFFPAELASLYDFPSGDGAGQTLGILEFGGGYFADDLASFCQSAGVSP
                     VPSVSVVSVDHASTKARDGAEGEVMLDVEVVAGVCPKAKIVVYFSSFTTKGWVDAVDA
                     VVHDSQHNPSVLSISWGDSEDNAGWSAAAIRQVSESLQEAALLGITVCVAAGDDGSDD
                     QVGDGRAHVDYPASDPNVLGVGGTRLRRKGTKRSSEVVWKDGDGLRKDGGGSTGGGVS
                     TVFPRPDWQAVNIESVNFGALKGRVVPDVAANASANTGYFVVVDGQAEISGGTSASAP
                     LWASLVVLLNAELGRRLGWLTPLLYRAAPTSSGKSVGAAGCHDIQSGNNDTSAAGGYS
                     AKKSAYDAVTGWGAPVGTALLAELKKLPAS"
     gene            complement(2409..3203)
                     /locus_tag="VLJ38_01535"
     CDS             complement(2409..3203)
                     /locus_tag="VLJ38_01535"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU38207.1"
                     /translation="MDLGLDKKRALVTGSTAGIGFAAAECLAREGAHVIVNGRTPARV
                     EHAVAAIRGSVPDAVVEGIAADVSKAEGCAAIVARFPELDVLVNNMGIFEPKPFDAIT
                     DADWFRFFEANVMSGVRLSRYYVAGMRARDWGRIVFVSSESALQIPAEMIHYGMTKTA
                     QLAVARGLAETLAGTNVTVNSVLPGPTSSEGVSGFVAEIGRAQNKDVATVEREFFRDV
                     RPSSVIRRFTTPAEVAALITYVCSAPASATTGAALRVDGGVVRAIA"
     gene            complement(3276..3842)
                     /locus_tag="VLJ38_01540"
     CDS             complement(3276..3842)
                     /locus_tag="VLJ38_01540"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HSU38208.1"
                     /translation="MKRKLADVPAAPSERARAETERARAETELVFARAAAALGVQALL
                     PNRGRVGPARGQTPAVVPPAPEFVVREEDGWVEGYRRELGPRVIARLRGKPRATLDLH
                     GARVASARASVASFLARARAGTLVLIVVGKGRHSPAGEAVLAREIGAWLSTGSPARRV
                     VAFCTAPPELGGSGGVLVLLGASGAEEP"
BASE COUNT          623 a         1386 c         1287 g          637 t
ORIGIN      
        1 tcttggattt tttggtgttg gtgttcgccg tgtaaacgag gaactttccc gaggcgctcg
       61 cgctgatgag tgtctcggag tacgtcgtgc tgccgatttc ctgcgcgccg cccgcgtgcg
      121 tccagatcga caggtcgccg acgttcgccg tccaatcgac gttcgcgaag ttgaacacga
      181 ctttgccgcg gacgagcgtg ttgccaggtt gatccgcgac gagctcggcg tcggcgtcgc
      241 tgccgagctt ctgggcatag agctcgtcgc cgagccggta gagcacccaa tcgtcgctcg
      301 tcatgccggt catcgacgcc gagccgctcg tcagttgcgt cggcgtgccg agcgttccgg
      361 ggttgcccgt cgtgtctcct cctgccgcgc ccgtggaatc ttgacccgcg ctgccgtggc
      421 tcgtcgtgcc cccagagccg tgctggctcg taccgcccgt tccggcaatg gggccgtcgg
      481 agcccccaca cgcgctgaag gcgagcaaaa gagcgaagga taggagcgtt cgggtgcggc
      541 cgatggttct agctgacgtc gacatggcgc gttgaagacg tcgccaagca agatcgaggc
      601 cgaggcgccg cgctcagctc gccggcagct tcttgagctc ggcgagcagc gcggttccga
      661 ccggtgcccc ccagccggtc acggcatcgt acgcgctctt cttcgcgctg tacccgccgg
      721 ccgcgctcgt gtcgttgttg cccgactgga tgtcgtggca accggcggcg ccgacgctct
      781 tgcccgagct cgtcggcgcg gcgcggtaaa ggagtggcgt gagccaaccc agacggcggc
      841 cgagctcggc gttcagtaac acgacgagcg aagcccaaag cggggccgaa gcgctcgttc
      901 cgccggatat ctctgcctgg ccatccacga cgacgaagta gccggtgttg gcgctcgcgt
      961 tcgcggcgac gtccggcacg acgcgtcctt tcagcgcgcc gaaattgacg gactcgatgt
     1021 tcacggcttg ccagtcgggc cgcgggaata cggtgctcac cccaccgccc gtgctgccgc
     1081 cgccgtcctt gcgcagcccg tcaccgtcct tccacacgac ttccgaggaa cgcttcgtgc
     1141 ctttgcgccg caagcgagtc ccgccgacgc cgagcacgtt cggatccgac gcgggataat
     1201 ccacgtgcgc gcgcccgtcg cccacctggt cgtcgctccc gtcgtcgccg gccgccacgc
     1261 aaacggtgat gccgaggagc gcggcttcct gcagcgattc gctcacctgg cgaatggccg
     1321 cggccgacca gcccgcgttg tcttccgaat ctccccagct tatcgagagc acgctcggat
     1381 tgtgctgcga gtcgtgaacg acggcgtcta ccgcatcgac ccagcccttg gtcgtgaaag
     1441 agctgaagta cacgacgatt ttggccttgg ggcaaacgcc ggccacgact tcgacgtcga
     1501 gcatcacctc gccctcggcg ccgtcgcgcg ctttggtcga cgcgtgatcg acgctcacca
     1561 cgctgacgct cggcaccggg ctcacgccgg ccgattggca gaacgacgcg agatcgtcgg
     1621 cgaaatagcc gccgccgaat tcgagaatgc cgagcgtttg acccgcacca tcaccgctcg
     1681 gaaagtcgta gaggctcgcg agctccgcgg gaaaaaacca cgggcgcgtc gccgccttgg
     1741 cgagactcac ggcgcggggc cgtgtcgcga cacgacgcgg tttgacgacg gggcggttgt
     1801 cgagaccgaa cacaccgacg atgacgccgt cgagctccgc cgggacgtgg agcggccccg
     1861 tgcgtccacg ataatcgccg cgctcgtgtg cgaaacgcac gagcttcgtc ccgaatgcct
     1921 gctccatcgc cgagaccggt ccaccgattt tgagcgaccg ctgcgccagg ttgctctcga
     1981 cgatttcgat gccgtattga gcgagcgccc ctgcgacgag gcgctcgtcg gcggctgacg
     2041 cgccgtactg cgcgagctct tcgcgcgtca gcgcggcctt accgggctcg ggcgcgggca
     2101 aggccgcctg acgccggagc ttgacggtcg cttccaccca ctcgtcctcg ggcgctctac
     2161 cgagcgcttt ggcgccttgc aacgcgactc gctccgatcc cttcaagacg acgtgagacc
     2221 ctggcatcat cgaacctccg aatgttcctt tgccacccgc gcgatcgttc gcgcggcggc
     2281 atgatgcgcc gggaagtcag agcatgtcta gcaacggcgc agacgcgtgc tcggcgtcac
     2341 cgacgccggg tgcacgacgc tgtcctgcta aaaattttta gacgctgcgc ggcccgtcgc
     2401 gaaaggactc aggcaatggc acgcacgacg ccgccgtcga cgcgcagagc tgccccggtc
     2461 gtcgccgacg cgggcgcact gcaaacgtaa gtgatgagcg ccgcgacctc cgcgggcgtc
     2521 gtaaagcggc gaatcaccga cgaggggcgc acgtcgcgaa aaaactcgcg ctcgacggtg
     2581 gcgacatcct tattctgcgc cctcccgatc tccgcgacga agccggagac gccctcggag
     2641 gacgtgggtc cggggagcac gctattgacc gtgacgttcg tgccggcgag cgtttcggcg
     2701 aggccgcgcg ccacggcgag ctgagccgtc ttggtcatgc cgtagtggat catctcggcc
     2761 gggatttgga gcgcggattc actcgagacg aagacgatgc gcccccagtc gcgcgcccgc
     2821 atgcctgcga cgtagtagcg cgagagtcga acgccgctca tgacgttcgc ttcgaaaaac
     2881 cgaaaccaat cggcatcggt gatcgcgtcg aacggcttcg gctcgaagat gcccatgttg
     2941 ttgacgagca cgtccagctc gggaaagcgc gccacgatcg ccgcgcagcc ctcggccttg
     3001 ctcacgtcgg ccgcaatgcc ctcgaccacg gcgtccggca cgctgccgcg aatcgcggcg
     3061 acggcgtgct cgacccgcgc gggcgtgcga ccgttgacga tcacgtgcgc gccttcacgc
     3121 gcgaggcatt ccgccgcggc aaacccgatg cccgccgtgg aacccgtgac gagcgcgcgc
     3181 ttcttgtcga ggcctaaatc catgcgcgtg acgtagggac cgcgcgcgac gccgtcaact
     3241 cggacccaac gccggcaagg gcgagtgtgc gttttttacg gctcttcggc cccggaggcg
     3301 ccgaggagca cgagcactcc gccgctccca ccaagctcgg gcggcgccgt gcagaaggca
     3361 accacgcgac gcgccgggct tcccgtactg agccaggcgc cgatctcgcg agccaaaacc
     3421 gcctctccgg ccggtgaatg gcgccctttg ccgaccacga tcagcaccag cgtccccgcg
     3481 cgtgcccgcg cgaggaagct cgccacgctg gcgcgcgcac tcgcgacgcg cgcgccgtgc
     3541 agatcgagcg tcgcccgcgg tttaccgcgc aggcgagcga tgacgcgcgg cccgagctcg
     3601 cgtcgatacc cctccaccca gccgtcttct tcacgcacga cgaattccgg cgctggtggc
     3661 acgacggccg gcgtctgtcc tctggcgggg ccgacgcgtc cccgattagg gagcaatgct
     3721 tgcacgccga gcgccgccgc ggctcgcgca aagacgagct ccgtttcagc gcgcgcacgc
     3781 tccgtttcag cgcgcgcacg ctccgatggc gccgccggca cgtccgcgag cttgcgtttc
     3841 acaagcgcgc ggaacggacg gtgcggcggg aatttcggag cccgggccaa gcctgcttca
     3901 tgccgtgaaa ctgacggcaa tgccaggccc gag
//
LOCUS       DATIML010000091         5299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2328236, whole genome shotgun sequence.
ACCESSION   DATIML010000091 DATIML010000000
VERSION     DATIML010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5299
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2328236"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VLJ38_01545"
     CDS             complement(<1..520)
                     /locus_tag="VLJ38_01545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38209.1"
                     /translation="MDTARGTVRDALGSLGNLALLSGSAKVGSKAIAGVLPDVLASCG
                     PTREALVTLIEGLRGTLPASPVPDELEAFALPRIEELEAELSFRVNNKEPLRAPDRLG
                     LDRVLGRLSRELDAVQSLLELLDIAAYEAPFAFKVADLLRQRLPASPSGRRPARRFTA
                     RLSLTEPLPEVLL"
     gene            complement(616..1035)
                     /gene="ndk"
                     /locus_tag="VLJ38_01550"
     CDS             complement(616..1035)
                     /gene="ndk"
                     /locus_tag="VLJ38_01550"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: protein motif:HMM:NF001908.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HSU38210.1"
                     /translation="MTTQRTLCIIKPDAVERRQQGAILQRLLDEGFRVLAMRQAVISR
                     PQIEGFYAVHRERPFFNELCTFMTRGPVILLALERADAVQHLRNVIGATDPAKAAAGT
                     VRKLYGSNVGENAVHGSDSEENGRIECGYYFSGMDLV"
     gene            complement(1147..2040)
                     /gene="sucD"
                     /locus_tag="VLJ38_01555"
     CDS             complement(1147..2040)
                     /gene="sucD"
                     /locus_tag="VLJ38_01555"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HSU38211.1"
                     /translation="MAILVSKQTKVVVQGITGSAGSFHAKQCIAYGTQIVAGVTPHRG
                     GEKFEAAGPNGAKVELPVFDTVAEAVKRTGADTSCIFVPALGAADAILEAADAGCALV
                     VCITEGIPVTDMIRVRRALEGRSVRLVGPNCPGVITPGACKIGIMPGHIHRVGRIGVV
                     SRSGTLTYEAVGQLTALGLGQSTCVGIGGDPVGGLDFVDVLKLFNEDGDTEAVMMMGE
                     IGGNAEERAAAFIKAHMKKPVAGFIAGATAPPGKRMGHAGAIISGGQGTASDKIKALE
                     AAGVRVAPSPAEMAVTLRSLL"
     gene            complement(2063..3262)
                     /gene="sucC"
                     /locus_tag="VLJ38_01560"
     CDS             complement(2063..3262)
                     /gene="sucC"
                     /locus_tag="VLJ38_01560"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HSU38212.1"
                     /translation="MKIHEYQGKQIFARYGIPIPKGYPCLSAEEVGNAAARLIEETKT
                     PVVVVKAQIHAGGRGKGGGVKVVKGGAEEAKAVAAKLLGMQLVTHQTGPEGQKVRRLY
                     VEQGLDIARELYLGLVVDREKRRIAVMASTEGGVEIEKVAAETPEKILTEHVDPAVGL
                     AGYQARKLAFGLRLNEGSPDPKLTVSEFVSVVTKLATLFEKEDCSLCEVNPLIVTKQG
                     KVIALDAKLNFDDNASGRHKDWNELMDKDEEDPVELEAKDAGLSYVSLDGDIGCLVNG
                     AGLAMATMDIIKHYGGTPANFLDVGGGATKEQVTKAFKMILTSPKVKGIFVNIFGGIM
                     RCDIIAEGVVAATRELGLKVPLVVRLEGTNVEEGKRILATSGLRIEAADGMGDGAKRI
                     VAAVRAA"
     gene            complement(3385..4059)
                     /locus_tag="VLJ38_01565"
     CDS             complement(3385..4059)
                     /locus_tag="VLJ38_01565"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSU38213.1"
                     /translation="MTRGTTLLNDDGTASMATLLLMSHHAFRRDLTRFSALLAKLGTP
                     DPTKAEALRAEWRSYHEALHGHHMMEDGNIFPGLRNAHVELSSVIDKLTEEHHRIDPL
                     LEQGDHAFAEPFDATAAKGIVAELTALLDAHLEREEAAIAPHLRGAKAFPPPPDEKLL
                     DVYAQGFAWSMHGIAEEVTREVEKLLPAGLVARVPAARAAFNQRCVRVWGSAEAGRSL
                     TSIPES"
     gene            complement(4183..5121)
                     /gene="mdh"
                     /locus_tag="VLJ38_01570"
     CDS             complement(4183..5121)
                     /gene="mdh"
                     /locus_tag="VLJ38_01570"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HSU38214.1"
                     /translation="MARRKIGLIGAGNIGGELANLALSRELGDVVLFDIPAKENFAKG
                     KALDLEQASALSGADAKVTGTSNWADLAGTDVLIITAGIPRKPGQSRDDLVETNLPII
                     RNVADNAKKHCPDAFVIVISNPLDAMVYEYKRRTGAPRAKVVGMAGVLDSARFALFLA
                     REAGVSVKDVRPMVLGGHGDDMVPVLSHTTINGIPVQKLVAKDALDKMIDRTRKGGGE
                     IVTLMGTSAYYAPAISAIEMAEAYLGDQKRVLPCAALLEGEYGYSDLYMGVPVVIGAG
                     GVERIVALELTAEEKGMLAKSAESVQKVRDLVKSKA"
     gene            5120..>5299
                     /locus_tag="VLJ38_01575"
     CDS             5120..>5299
                     /locus_tag="VLJ38_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38215.1"
                     /translation="MGAKPYLCPAAAATQNDHCLERKPPGFAAPERMNRQVAKNQKDW
                     GPWRLGGSFPRDAFNP"
BASE COUNT          825 a         1786 c         1744 g          944 t
ORIGIN      
        1 tgagcagcac ttctgggagc ggttccgtga gcgacaggcg cgcagtgaag cgccgcgcgg
       61 gacggcgtcc gctcggggaa gccggcaggc gctggcgcag cagatcggca accttgaacg
      121 cgaacggcgc ctcgtaggct gcgatgtcga gcagctcgag caaggactgc acggcgtcga
      181 gctcgcgcga gagccggccg agcacgcgat cgagccccaa gcgatcgggc gcgcgcagcg
      241 gctctttgtt gttcacgcga aagctgagct ccgcttcgag ctcctcgatg cgcggcagcg
      301 cgaacgcctc gagctcgtcg ggaacgggcg aggccggcag ggtaccccgg agtccctcga
      361 tcaacgtgac cagcgcctcg cgcgtgggtc cgcacgaggc gagcacgtcg ggcagcacgc
      421 cggcaatcgc cttcgagccg actttggccg aaccggacag gagcgcgagg ttaccgagcg
      481 aaccgagggc gtcgcgcacc gtgcccctcg cggtgtccat cgcggtatca cgtgggggct
      541 gcgagggagg acgcgcggtc gccatttccg gttccaccac actcagccac gttttcgtcc
      601 aggatcaacc gtcgattaca ccaaatccat tccggaaaag tagtagccgc actcgatgcg
      661 accgttctct tcggagtcgg agccgtgcac ggcgttctcg ccgacgttcg agccgtagag
      721 cttgcgcacg gtgccggcgg ccgccttggc gggatcggtc gcaccgatca cgttgcgcag
      781 atgttgcacg gcgtcggcgc gctcgagcgc gagcagaatc accggaccgc gcgtcatgaa
      841 cgtgcagagc tcgttgaaaa acggccgctc gcggtgaacc gcgtaaaatc cttcaatttg
      901 cggccgggaa atcacggctt ggcgcatcgc gaggacgcga aacccttcgt cgagtaggcg
      961 ctgcaggatg gcgccctgct ggcgacgttc gacggcgtcc ggtttgatga tgcagagagt
     1021 gcgctgtgtc gtcatcgttt cgtcgatctg cgccgtttcg ggcgcgtaaa agcggccccc
     1081 tcataccaag cccagggggt tacgcaacat ttttggttcg ccgggttccg ccgacgtccc
     1141 gtccaactac aaaagactgc gcaacgtgac ggccatctcc gcgggggagg gcgcaactcg
     1201 tacacccgcc gcttcgagtg ccttgatctt gtcgctggcg gtaccttgcc cgcccgagat
     1261 gatcgcgccc gcgtgtccca tgcgcttgcc gggcggcgcc gtcgcacccg cgatgaagcc
     1321 cgcgactggt ttcttcatgt gcgccttgat gaaggccgcg gcacgctcct cggcgttgcc
     1381 gccgatctcg cccatcatca tgacggcttc ggtgtcgccg tcctcgttga agagcttgag
     1441 cacgtcgacg aagtccaagc caccgacggg gtcgccgccg atgccgacgc acgtcgactg
     1501 accgagtccg agcgccgtga gctgcccgac cgcttcgtaa gtgagggtgc ccgaacgcga
     1561 aaccacgccg atgcggccga ccctgtggat gtggcccggc atgatgccga tcttgcacgc
     1621 tccgggcgtg atcacgccgg ggcagttggg accgacgagg cgtacgctgc gcccctcgag
     1681 cgcacggcgc acgcggatca tgtccgtcac ggggatgccc tccgtgatgc agacgacgag
     1741 cgcgcaaccg gcgtccgcgg cctcgaggat cgcgtcggcc gcgccgagcg cgggcacgaa
     1801 gatgcacgac gtgtcggccc ccgtgcgctt cactgcttcg gcgacggtat cgaagacggg
     1861 gagctcgact ttcgcgccgt tcggccccgc cgcctcgaac ttctccccac cgcgatgggg
     1921 cgtgactccg gcgacgattt gcgtgccgta cgcgatgcac tgcttggcgt gaaacgagcc
     1981 cgccgagccc gtgatgcctt gaacgacgac cttggtctgc ttgctgacga gaatggccat
     2041 gatgctttgc ccttgattcg cttcaggcgg cgcgcacggc ggcgacgatc cgcttcgctc
     2101 cgtcgcccat gccgtccgcg gcttcgatgc gaagcccgct ggtcgcgagg atgcgcttgc
     2161 cttcctcgac gttggtccct tcgagccgca cgacgagcgg caccttgagc ccgagctcgc
     2221 gcgtcgccgc caccacgccc tcggcgatga tgtcgcaacg catgatgccg ccgaagatgt
     2281 tcacgaagat ccccttcacc ttggggctcg tgaggatcat cttgaacgct ttggtgacct
     2341 gctccttggt cgcgccgccg cccacgtcga ggaagttcgc gggcgtgccg ccgtaatgct
     2401 tgatgatgtc catcgtggcc atcgcgagcc cggcgccgtt gacgaggcag ccgatgtcgc
     2461 cgtcgagcga gacgtaggag agaccggcat ccttggcttc gagctcgacc ggatcttctt
     2521 cgtccttgtc catgagctcg ttccagtcct tgtgccggcc cgaagcgttg tcgtcgaagt
     2581 tgagcttggc gtcgagcgcg atgaccttgc cctgcttcgt cacgatcagc ggatttacct
     2641 cgcagagcga gcaatcttcc ttctcgaaca gggtcgcgag cttggtcacg acgctcacga
     2701 actccgagac ggtgagcttc gggtcgggcg agccctcgtt gagacgcagc ccgaacgcga
     2761 gcttgcgcgc ctggtagccg gcgaggccca ccgcgggatc gacgtgctcc gtcaggatct
     2821 tctccggtgt ttcggcggcg accttctcga tctcgacgcc gccttcggtg gaggccatca
     2881 cggcgatgcg gcgcttctcg cggtctacga cgagtccgag gtagagctcg cgcgcgatgt
     2941 cgagcccctg ctcgacgtag aggcggcgca ccttttggcc ctcggggccg gtctggtgcg
     3001 tgacgagctg catgccgagg agcttggccg cgacggcctt cgcctcttct gctccgccct
     3061 tgacgacctt gacgccgccg cccttaccgc ggccgccggc gtggatctgc gccttcacca
     3121 ccacgacggg cgtcttcgtc tcctcgatca ggcgcgcggc ggcgttacct acctcctcgg
     3181 cgctgagaca gggataaccc ttggggatgg gaatgccgta gcgtgcgaag atctgcttgc
     3241 cctgatattc gtgaatcttc atggctgact cggggaggag cggggaagca cctcatagtc
     3301 cagcttcggc tccgctgcac ggccggagcg agccggggtc agccaccgga aggagcgtgc
     3361 ccttccgcgg caaaaaccag cgcgtcaact ctcgggtatc gaggtgagcg agcgtcccgc
     3421 ctcggccgag ccccacaccc gcacgcagcg ctgattgaac gccgcgcgcg ctgcggggac
     3481 ccgcgcgacg aggcccgccg gcaggagctt ctcgacctcg cgcgtcacct cctcggcgat
     3541 gccatgcatg ctccaagcga aaccttgcgc gtaaacgtcg agcaatttct cgtcgggtgg
     3601 cgggggaaac gccttggcgc cgcgcaggtg cggcgcgatc gccgcctcct cacgctcgag
     3661 gtgcgcgtcg agcagcgccg tgagctcggc gacgatgccc ttcgcggccg tggcgtcgaa
     3721 cggctccgcg aatgcgtggt cgccctgctc gagcagcgga tcgatacggt ggtgctcttc
     3781 ggtgagcttg tcgatcaccg agctgagctc cacgtgggcg ttacggagcc ccgggaaaat
     3841 gttgccgtct tccatcatgt gatggccgtg cagggcttcg tgatagctcc gccattcggc
     3901 gcgcagcgcc tcggccttcg tcgggtcggg cgtgccgagc ttggcgagca gcgcggagaa
     3961 gcgcgtgaga tcgcgccgaa atgcgtgatg cgacatgagc agcaacgtcg ccatcgacgc
     4021 ggttccgtcg tcgttcaaga gcgtggtccc tcgagtcatg gcgtttctct aagaccacgc
     4081 tgacgactga ccagcccccg ctgtgctggc agacaatgcc ccgcagcggg ctcggcgccg
     4141 ctcgctcaga ggcggcgccg tttgcgcgac gtgccggcga acctacgcct tggacttcac
     4201 gagatcccgc accttctgca cgctctcggc gctcttggcg agcatcccct tctcttcggc
     4261 cgtcagctcg agcgccacga tgcgctccac gccgcccgcg ccgatgacga ccgggacgcc
     4321 catgtacaaa tccgagtacc cgtactcgcc ctcgagcagc gcggcgcacg gcagcacgcg
     4381 cttctgatca ccgaggtacg cctccgccat ctcgatcgcg ctgatggcgg gcgcgtaata
     4441 cgcgctcgtg cccatgagcg tcacgatttc gccgccgccc ttgcgcgtgc ggtcgatcat
     4501 cttgtcgagc gcgtccttgg cgacgagctt ctgcacgggg atgccgttga tggtcgtgtg
     4561 cgacagcacg ggcaccatgt cgtcgccgtg accgccgagc accatcgggc gcacgtcctt
     4621 gacgctcacg cccgcctcac gcgccaagaa cagcgcgaaa cgcgcgctgt cgagcacgcc
     4681 cgccataccg acgaccttcg cgcgcggcgc gcccgtgcgg cgcttgtact cgtagaccat
     4741 cgcgtcgagc gggttcgaga tcacgatcac gaacgcgtcg gggcagtgct tcttcgcgtt
     4801 gtcggcgacg ttgcggatga tggggaggtt cgtctccacg agatcgtcgc gcgattggcc
     4861 gggcttacgc ggaatgccgg ccgtgatgat gagcacgtcc gtgcccgcga ggtcggccca
     4921 gttcgaggtg ccggtcacct tcgcgtccgc gcccgagagc gcgctcgctt gttcgagatc
     4981 gagggccttg cccttcgcga agttttcctt cgcggggatg tcgaagagaa ccacgtcgcc
     5041 gagctcgcgg ctgagcgcga gattggcgag ctcgccgccg atgttgcctg cgccgatgag
     5101 accgattttt cgccgtgcca tgggtgcgaa gccctacctc tgcccggcgg cggcggccac
     5161 ccaaaacgac cactgcctcg agcgtaaacc accaggtttt gcagctccag agcggatgaa
     5221 ccgccaagtc gccaagaatc aaaaagattg gggtccttgg cgacttggcg gttcatttcc
     5281 cagggatgcg ttcaatcct
//
LOCUS       DATIML010000092         3160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1463338, whole genome shotgun sequence.
ACCESSION   DATIML010000092 DATIML010000000
VERSION     DATIML010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3160
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463338"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VLJ38_01580"
     CDS             <1..660
                     /locus_tag="VLJ38_01580"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HSU38216.1"
                     /translation="SGGEGRPNQQYGQSYGSGSGGSDYGNQTYGGPNYGGSGGQNYGN
                     QNRWSEQRGYDQGRWTETAGHTTLRGIGSANESQGGSTLQGWSRSSNEESRRGGFYGK
                     GPRGYTRSDERIREDICDRLSADDEVDASDITVTVAKTEVTLEGSVPDRHSKRRAEDI
                     AESVTGVTEVHNRLRSNKGVMQEVGDKIMGRGTEGGHAGSGTRNAPAGTSGTQNLQNN
                     H"
     gene            complement(719..2227)
                     /locus_tag="VLJ38_01585"
     CDS             complement(719..2227)
                     /locus_tag="VLJ38_01585"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HSU38217.1"
                     /translation="MHLQALLNAPPAVYGLALGAFGLFVLALLLPRGERRQMRGPLLA
                     LLIYAAARTAADLFPPSDVVPKLLRFTAAFAWGTGLVRSVFVVFASSRVLRVVPRWPK
                     ILRDIVQGVLYVGVALAALHAVGVEPGSLLTTSALLTAVVGLSLQETLGNLFAGLALQ
                     NQETLMLGDWVRFADGHDGVGEVIEINWRATHFLTFGRVQVVVPNGVLARSTVRNYSR
                     PTPIVRVETEVVLPYEISAEKARGVLLHALQGVDGIVREPAPFVVVGDFNDSGIAYSV
                     RFFISEFSRHDAIESAARQRILYALRRANIGIPFPLRHFDLVGTAATKLAGLPEPTVV
                     AASDLAARLARTEVFRGLSGDLLASLGESTHPRLYSPGEIIIRQGDPGTELYALERGQ
                     VELVISNEQGQPVRVSVLDTGAVFGEAAFLTGGRRAATIVALSECEVLAIPRSALHHL
                     LEKNRALSERLAKVLADRMDLLSQALNQAAETRLDEDRRSDLLFERIRQFFD"
     gene            complement(2249..2893)
                     /locus_tag="VLJ38_01590"
     CDS             complement(2249..2893)
                     /locus_tag="VLJ38_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38218.1"
                     /translation="MASPSSFLVPTLLTGLLGVACASKPAAPFDTLKNANATAYRLQN
                     YEPQQAAPVAAAPGAPPAIPGLPPEIQSWIQTGAQSLQQLIPPGLIPGLPGATAGLPA
                     AVPEAPRFHNYRILSQTQVMDPELREKLGDILGSSKSFDNQYARCAPGVIYPEMGLTF
                     TAGPTAQPSDLLISFSCSQVVSRSFAWPHPATGMKPETVESLTAVVQKLWPAGT"
BASE COUNT          567 a          985 c         1149 g          459 t
ORIGIN      
        1 tccggtggcg agggccgtcc caatcagcaa tacggccaga gctacggctc gggctctggc
       61 ggctccgatt acgggaacca gacctacggc ggcccgaact acggcggctc cggcggccag
      121 aactacggca accagaatcg ctggagcgag cagcgcggct acgatcaggg acgctggacc
      181 gaaaccgcgg gacacacgac gctgcgcggg atcggtagcg cgaacgaaag ccaaggcggt
      241 tcgacacttc agggctggag ccgctcctcg aacgaggaga gtcgtcgcgg cggcttctac
      301 ggcaagggtc cccgcggcta cacgcgctcc gacgagcgca tccgcgagga catctgcgat
      361 cgcttgagcg ccgacgacga agtggacgcg agcgacatca ccgtcaccgt ggccaagacc
      421 gaagtgacgc tcgaaggcag tgtgccagac cggcattcca agcgccgcgc cgaagacatc
      481 gccgagtccg tgacgggcgt gaccgaggtc cacaaccgct tgcgctcgaa caagggcgtc
      541 atgcaagagg tcggggacaa gatcatgggt cgcggcaccg agggcggaca cgcgggctcc
      601 ggcacgcgca atgcgcccgc cggcaccagc ggcacgcaaa acctccagaa caaccactga
      661 cgagatggac accgcgctcg gccggcgcaa cgctgcgccc ggccggcgcg ccgtgcgctc
      721 aatcgaagaa ctgccgaatg cgctcgaaca ggagatcgct ccggcgatcc tcgtcgaggc
      781 gtgtttcggc ggcttgattg agcgcctggc tcaagagatc catccggtcg gcgagtactt
      841 tggcgagccg ctcggagagg gcgcggttct tctcgagcaa gtggtgcaag gcgctgcgcg
      901 ggatggcgag gacctcgcac tcgctcagcg ccacgatggt ggcggcgcgg cggccgcccg
      961 tgagaaacgc cgcttcaccg aagacggcgc ccgtgtcgag gacggagacg cggacgggct
     1021 gtccctgctc gttgctgatc acgagctcga cttggccgcg ttcgagcgcg tagagctcgg
     1081 tcccgggatc gccttggcgg atgatgatct cgcccgggga gtagagccgc gggtgcgtgc
     1141 tttcgccgag ggaggcgagt aggtcgccgc tgaggccgcg gaagacttcg gtgcgggcga
     1201 gacgtgcggc gagatcgctc gcggcgacga ccgtaggttc gggcaggccg gcaagtttgg
     1261 tcgcggcggt gccgacgaga tcgaagtggc gaagggggaa cggaatgccg atgttggcgc
     1321 gacgcagcgc atacaggatg cgctggcgcg cagcgctttc gatcgcgtcg tgccggctga
     1381 attcgctgat gaagaagcgg acggagtagg cgatgccgct gtcgttgaag tcgccgacga
     1441 cgacgaacgg agccggctcg cgcacgatgc cgtcgacgcc ttgcagggcg tgcaggagca
     1501 cgccgcgcgc cttttccgcc gagatttcgt aggggaggac gacttcggtc tcgacgcgaa
     1561 cgatgggggt cgggcgcgag tagttgcgca ccgtcgagcg ggcgagcacg ccgttcggca
     1621 cgaccacttg gacgcgaccg aacgtgagaa agtgcgtggc gcgccaattg atttcgatga
     1681 cttcaccgac gccgtcgtga ccgtcggcaa agcgcaccca gtcgccgagc atcagcgtct
     1741 cttggttttg tagggcgagg ccggcgaaga ggttgccgag cgtctcctgc agcgacaggc
     1801 cgacgacggc cgtgagcaac gccgacgtcg tgagcagcga gcccggttcg acgccgaccg
     1861 cgtgcagcgc cgcgagcgcg acgccgacgt agagcacgcc ctgcacgatg tcgcgcagga
     1921 tcttcggcca gcgcggcacg acgcggagca cgcgcgagct cgcgaacacg acgaacacgc
     1981 tgcgcacgag gcccgtgccc cacgcgaacg ccgccgtgaa gcgcaagagc ttgggcacga
     2041 cgtccgacgg cgggaacagg tcggcggccg tgcgcgccgc ggcgtagatc aacagcgcca
     2101 agagcggccc gcgcatttgg cgccgctcgc cgcgtggcaa gagcagcgcg agcacgaaca
     2161 gcccgaacgc accgagcgcc aagccgtaga cggcgggcgg cgcgttcagc agggcctgca
     2221 gatgcacggc cccgatctta ccgaagatct aggtccccgc gggccagagc ttttgcacga
     2281 cggcggtgag gctctcgacg gtctcaggct tcatgcccgt ggccgggtgc ggccaggcaa
     2341 agctccgcga gacgacctgg ctgcacgaaa acgagatcag caggtcgctc ggctgcgccg
     2401 tgggccccgc cgtaaaggtg aggcccatct ccggatagat gacgcccggc gcgcagcgcg
     2461 cgtactggtt atcgaagctc ttcgagctgc cgagaatgtc gccgagcttt tcgcgtagct
     2521 cggggtccat gacctgcgtc tggctcagga tgcgatagtt gtgaaagcgc ggcgcctcgg
     2581 gtacggcggc gggcaacccg gcggtagcac ccgggagacc ggggatgagt cccggcggga
     2641 tcaactgctg caagctctgc gcgcccgttt ggatccacga ctggatctcg ggaggcaagc
     2701 ccgggatcgc cggcggagcg cctggagccg cggcgacggg agcggcttgc tgaggctcgt
     2761 agttctgcag gcggtaagcc gtggcgttcg cgttcttcaa cgtgtcgaac ggtgccgcgg
     2821 gcttgctcgc acaggcgacg ccgagcagac cggtgagcaa cgtgggtacc aagaaggacg
     2881 aggggcttgc catgggcggt ttctattacg atttccgggg ggcaccaagt tcgttctact
     2941 ggccaagtcg tgagttgtgg caactgacac aggggctttt cgccgctagc ccccgccccg
     3001 aaagtcactt atcgattcgg cagggacaat gagcgaattt ttctgcggct cgcggtccga
     3061 tcgagcgcac gaggcgaatt gccgtggctg agtgcatcgt cgtgacgggc gggaccggtt
     3121 atgtcggtcg agcgctcgtt cgacgtttgg cggcggccgg
//
LOCUS       DATIML010000093         2551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5218073, whole genome shotgun sequence.
ACCESSION   DATIML010000093 DATIML010000000
VERSION     DATIML010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5218073"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1125
                     /locus_tag="VLJ38_01595"
     CDS             <1..1125
                     /locus_tag="VLJ38_01595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38219.1"
                     /translation="FRRLSLGELGAPTLFLGNPPYVRHHTISPRDKAWFVRTARAAGL
                     RASALAGLHAHFFLATSRHARPGDFGAFVTAAEWLDVNYGALVRELFLERLGGSALFL
                     VEPRARPFADADTTAVVACFSVGERPQTLRFGMVAEGAELGRLTGGRAVPRARFEASS
                     RWTALTRRASVRPAGHVELGELFAVHRGQVTGDNATWVERELANLPERVRFPAVTRAK
                     ELFAAGPVLSELDGLRRVIDLPPDLDVLSASERRRVAAFLRAARGRGVHLGFIAQHRK
                     AWWSVGLHAPAPLLATYMARRPPAFVRNPHGARHLNIAHGLYPREPLDEAVLDAVARY
                     LNTNASLTGGRTYSGGLTKFEPREMERLLLPGLELLRDRH"
     gene            complement(1169..>2551)
                     /locus_tag="VLJ38_01600"
     CDS             complement(1169..>2551)
                     /locus_tag="VLJ38_01600"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSU38220.1"
                     /translation="GRYFEQRFNVYTDLGSIADGFRFLHSTRPIWEIVLGTVVALALL
                     VGLAFACYRALREVEVYLRDRRQVLVASGLLAITYVCVAASEHNLKFESLYSSGFAAS
                     AMSRMEEEVSFVWNVRSQRAGYGALIAQTEAMLDGLPSDLAKLHGADVYLILVESYGR
                     TMFELPEHIDASKATYEAFEKELSAEGFSLATGIVNSTTYGGQSWLAHATLDTGVPVH
                     GQLEYEIVSAKQPKSIATFFHRAGYRTVLAEPNTTGALTGGPLYDFDAQYVNKDFDYH
                     GPDYAWATMPDQYVLDFVRRRELEHADRPLLIQYVLVSSHAPWARIPRLLDDWSKLGN
                     GSIFLTQPLEEFPIEWPHFENATGPYAKSIIYDLDVLRRYLTDYVKDGSLVIILGDHQ
                     PVAEVNGNSEEMGVPVHVLSRNPELVRPFLARGYRKGVRPNRAGFAQGLETLLPNLLV
                     DYSTQRSVDQ"
BASE COUNT          398 a          839 c          868 g          446 t
ORIGIN      
        1 ttccggcgct tgagcctcgg cgagctcggc gcgccgacgc tctttctcgg taacccgccg
       61 tacgtgcgtc accacacgat ttcgccgcgc gacaaggcct ggttcgtcag gacggcgcgc
      121 gccgccgggc tacgcgcgag cgcgctggct ggactgcacg cgcacttctt cttggcgacg
      181 agtcgccacg cgcggccggg tgatttcggg gcgttcgtca cggccgccga gtggctcgac
      241 gtgaattacg gcgcgctcgt gcgcgagcta tttctcgagc ggctcggcgg tagcgcgctg
      301 tttctcgtcg aaccgcgcgc gcggccgttc gcggacgcgg acacgacggc cgtcgttgcg
      361 tgtttctccg tgggcgagcg gccccaaacg ttacggttcg gaatggtcgc cgagggcgcc
      421 gagctcggtc gcctgacggg cggacgcgcc gtgccgcgcg cgcgcttcga ggcctcgagc
      481 cgctggacgg cgctcacccg tcgcgcgtcc gtacgcccgg cggggcacgt cgagctcggc
      541 gagctcttcg ccgtgcatcg cgggcaagtc acgggcgaca acgccacgtg ggtcgagcgc
      601 gagctcgcga atctgcccga gcgcgttcgc ttccccgccg tcacgcgcgc gaaggagctt
      661 ttcgcggccg gcccggtgct ctcggagctc gacggtttgc ggcgcgtgat cgatttgccg
      721 cctgatctcg acgtgctcag cgcgagcgaa cgccgccgtg tcgcggcgtt cttgcgcgcg
      781 gcgcgcggcc gcggcgtgca tctcgggttc atcgcgcagc atcgcaaggc gtggtggtcg
      841 gtgggtttgc acgcacccgc gccgctgctc gcgacgtaca tggcgcgtcg cccgcccgcc
      901 ttcgtccgca atccgcacgg cgcacgtcac ctgaacatcg cgcacggtct ctacccgcgc
      961 gagccgctcg acgaggcggt actcgacgcc gtcgcccgct acctgaacac gaacgcgtcg
     1021 ctcaccggcg gacgcaccta ctcgggtggc ctcaccaagt tcgagccgcg cgaaatggag
     1081 cgtctactcc tgcccggact cgagcttttg cgcgaccgcc actagtccaa gaagcccgat
     1141 cttctgccga gggcgttggg cggtcttgct actggtcgac gctgcgctgg gtcgaatagt
     1201 cgacgagcaa gttcggcagt agcgtctcga gtccctgcgc gaagcctgcg cggttcgggc
     1261 gcacgccctt gcgatagccg cgcgcgagaa atggccgcac gagctcgggg ttgcggctga
     1321 gcacgtgcac gggcacgccc atctcctcgc tgtttccgtt cacttcggcc accggttggt
     1381 ggtcaccgag gatgatgacg agcgagccgt ccttcacgta gtccgtgagg tagcgccgga
     1441 gcacgtcgag atcgtagatg atcgacttgg cgtacggccc cgtcgcgttc tcgaaatgcg
     1501 gccattcgat gggaaattct tcgagcggct gcgtcaggaa aatcgagcca ttgccgagct
     1561 tactccagtc gtcgagcagc cgcggtatgc gcgcccacgg cgcgtggctc gagaccaaga
     1621 cgtactgaat caggagcgga cggtcggcgt gctcgagctc gcgccggcgc acgaaatcga
     1681 gcacgtattg atcgggcatg gtggcccagg cgtagtccgg gccgtgatag tcgaagtctt
     1741 tgttcacgta ttgggcgtcg aagtcgtaca aggggccgcc cgtgagtgct cccgtggtgt
     1801 tcggttcggc gagcaccgtg cggtagccgg cgcggtggaa gaaagtcgcg atcgacttgg
     1861 gttgcttggc ggacacgatt tcgtattcca gctggccgtg gacggggacg ccggtgtcga
     1921 gcgtcgcgtg cgcgagccac gattgaccgc cgtaggtcgt ggaattgacg atgccggtcg
     1981 ccagcgagaa gccctccgcg ctgagctcct tttcgaacgc ctcgtacgtc gccttcgacg
     2041 cgtcgatgtg ctcggggagc tcgaacatcg tccggccgta agattcgacg aggatcaaat
     2101 agacgtcggc gccgtgaagt ttggcgaggt cgctcggcaa gccgtcgagc attgcttcgg
     2161 tctgcgcgat gagcgcccca taaccggcgc gctgactgcg gacgttccag acgaacgaga
     2221 cctcctcctc cattcgcgac atcgcgctcg cggcaaagcc gctcgaatac aacgactcga
     2281 acttcaggtt gtgctccgac gcggcgacgc agacgtaagt gatcgccaat agaccgcttg
     2341 ccaccagcac ctgacggcgg tcgcgcaaat acacctcgac ttcacgcagc gcgcggtaac
     2401 aggcgaacgc aagacccacg agcagcgcca gggccaccac cgtaccgagc acgatttccc
     2461 agatcgggcg agtcgagtgc aggaagcgga agccgtcggc aatcgagccg aggtcggtgt
     2521 acacgttgaa gcgttgctcg aagtagcggc c
//
LOCUS       DATIML010000094         3136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_598729, whole genome shotgun sequence.
ACCESSION   DATIML010000094 DATIML010000000
VERSION     DATIML010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_598729"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VLJ38_01605"
     CDS             complement(<1..338)
                     /locus_tag="VLJ38_01605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38221.1"
                     /translation="MQKNTLHSLGILIGALGAAAYSCSPSVEQGPGTGLGATGSTSGG
                     SSSANGGTSGANSATGGSSNSSSGGSSTGGSSNSSSGGSLGSLDIDASMSDAATMVDE
                     DAACGKGEANG"
     gene            complement(656..1747)
                     /locus_tag="VLJ38_01610"
     CDS             complement(656..1747)
                     /locus_tag="VLJ38_01610"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HSU38222.1"
                     /translation="MISLRPTSVYAGELKPHLPARVFEPARSRLLWLPVHFGVILAGT
                     LALAEHWARGLAAPLVSLVIGCSFAGLAFVAHETLHGAIVRGKRWRLVVGWLAFLPFV
                     LSPRLWIAWHNRMHHGHANLPGVDPDAYPTLGEHRRSLLVRLSTDCFGVGRDRFRGLT
                     SLLIGFHVQSLHVLFTARRRRYLQPRELAFAFLETGAGVALWSFFALVLGMGTFFWAY
                     VVPALIANACVMGYIFTNHALSPHTDVNDPLANSLSVTVPPWVDFLTLRFGFHVEHHL
                     FPWMSSRHAPVVRDLVRARWPERYQSMPLWKALAAVHATPRVYADHDTLVDPQTGYRF
                     HTLVAKVRRTLRESVRPHTASRIAARPEG"
     gene            2086..>3136
                     /locus_tag="VLJ38_01615"
     CDS             2086..>3136
                     /locus_tag="VLJ38_01615"
                     /inference="COORDINATES: protein motif:HMM:NF025316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4215 domain-containing protein"
                     /protein_id="HSU38223.1"
                     /translation="MPRLSLLVVVGLVLAGTLGCGANATPSRDLPYSDPDGSGGTTSG
                     SGGSGGSGGSGNAPGAGGTVGVGGDLGLGGSGGSSGAECTPPTGPFCGDGMVNQPNET
                     CDDANLLPGDGCTGVCTIEPYFACPPAGGACSSTLRCGDGTRSPGEACDDGNNAANDG
                     CAADCSLVEPGYFCPTAGEPCMRSEGACGDSKVQPGETCDDGGTADGDGCSAQCRVEP
                     GFRCTQPGKPCIVVAACGNGTKEGGEECDDTNVTSGDGCSSTCHVELGWVCATPGMPC
                     RKTVCGDGKKEGTECCDDGNTVPMDGCTSDCHCEPTCPAIGACTPKCGNGIIEGTEVC
                     DDGNAADGDGCSSTCK"
BASE COUNT          532 a          993 c         1141 g          470 t
ORIGIN      
        1 ccgttcgctt cccccttgcc gcaggccgcg tcttcatcga ccatcgtggc cgcgtcgctc
       61 atggacgcgt cgatgtcgag gctgccgagt gagccgccag acgaggagtt cgagctgccg
      121 cccgtgctcg agccgcccga agaagagttc gagctgccgc cggttgccga gttcgctccg
      181 ctcgtcccgc cgttggccga cgagctgccg cccgaggtcg aaccagtcgc acccagacct
      241 gtgccagggc cctgttccac cgaggggctg caagagtaag cggcagcgcc gagggcgccg
      301 atcagaatgc ctaggctgtg aagcgtgttt ttttgcacgg ggccgcctcc gtgagcgggt
      361 ccagcgtgag gtgaattgag gtcgctcgaa gggagcgacc cggggcggtg aatctagcac
      421 accgtgtgct ggagacgctc atcaattgct acagtaaccg tcgcagtgag agtctgtccg
      481 ccaatcagct cacgcgcctc gatctttgct tcgacctttt cgcacggcgg cgttttcttg
      541 cagctcgagt gttagcttgc gctgccgttg gagggcgggg ccgtccgcca cgctcgaatg
      601 tccggagcct actacgcgcg cgcttcgtgc tcggcaacgt acggtgatgt tttcctcacc
      661 cctcgggtcg cgcagcgatg cgtgaggcag tgtgcggacg gacgctctcg cgtaatgtac
      721 gtcgaacttt cgcgaccagc gtgtggaacc gatacccggt ttgcggatcc acgagagtgt
      781 cgtgatcggc atacacgcgc ggcgtcgcgt gcacggcggc gagcgctttc cagagcggca
      841 tcgactggta gcgttcgggc cagcgcgcgc gcacgaggtc gcgcacgacg ggggcatggc
      901 gcgagctcat ccacgggaaa agatgatgct cgacgtggaa accgaagcgc agcgtcagga
      961 agtccaccca cggcggcacc gtcacgctga gcgagttcgc gagcgggtcg ttcacgtccg
     1021 tgtgcgggct cagcgcgtga ttcgtgaaga tgtagcccat gacgcacgcg ttggcgatca
     1081 gcgccggcac gacgtaggcc cagaaaaacg tgcccattcc gagcacgagc gcgaagaagc
     1141 tccacagcgc gacgcccgcg cccgtctcga ggaacgcgaa agcgagttcg cgcggctgca
     1201 agtagcgccg gcggcgcgcc gtgaacagga cgtgcaggct ctgcacgtgg aagccgatga
     1261 gcagactcgt gagtccccga aagcggtcgc gtcccacgcc gaagcaatcg gtgctcaggc
     1321 ggacgagcag actccgtcga tgctcgccga gcgtcgggta agcgtccgga tcgacgcccg
     1381 gcaggttggc gtggccgtga tgcatgcggt tgtgccaagc gatccagagc cgtggcgaga
     1441 gcacgaaggg caagaacgcg agccagccga cgacgaggcg ccaacgtttg ccgcgcacga
     1501 tcgcaccgtg cagcgtctcg tgcgcgacga acgctaggcc cgcgaacgag cagccgatga
     1561 cgagggagac gagcggcgcc gcgagtccgc gcgcccagtg ctcggcgagc gccagcgtgc
     1621 cggcgaggat gacgccgaaa tggaccggca gccagagcag acgcgagcgc gcgggctcga
     1681 acacacgcgc gggcaagtgt ggtttgagct ctccggcgta gaccgaagtc ggtcgcaggg
     1741 atatcaccct ataggtatgt gatggcgcga gtgttcgcgc cgtcatgctt gagtcacgaa
     1801 cacgcttgtt tcgtgtgggc aagccgacgc cttgccgtga cgcgggccgg cgaagccgcg
     1861 tcgcagcacg tcgctcgggg gcgaacgcgt cgcgtcgcgc acgtcgctcg gggaccgaag
     1921 actcgagtgt gcccgcaacg ttcgctcact cgggcgtaca gcgcccgaca tgcgcgaagc
     1981 gttttgagcc gtcgtgagct ccgactccca ccctggatca cgtggacagg gtcgcgccga
     2041 agtgtgcaag atgacggtga ccagtcgggt cggaggagct gctgaatgcc gcgcttgagc
     2101 ttgttggtgg tcgtgggcct cgtgctcgcg gggacgctgg gctgtggggc caacgccacg
     2161 ccgagccggg atttgccgta ctccgacccg gacggaagcg gtggcacgac gagcgggagc
     2221 ggagggagcg gagggagcgg agggagcggg aacgcgccgg gcgctggcgg aacggtcggc
     2281 gtgggcgggg atctggggct cggcggctcg ggaggcagtt cgggcgccga gtgcaccccg
     2341 ccgacgggtc cgttctgcgg tgacggcatg gtcaatcagc cgaacgagac ctgcgacgac
     2401 gctaacctcc tgcccggcga cggctgcacc ggcgtttgca cgatcgaacc ctacttcgcc
     2461 tgtccgcccg cggggggcgc gtgcagctcg acgctgcgct gcggcgacgg cacgcgctcg
     2521 cccggcgagg cctgtgacga cggcaacaac gccgccaacg acggttgcgc cgcggactgc
     2581 tcgctcgtcg agcccggcta cttttgcccg acggcaggcg agccttgcat gcgctccgag
     2641 ggcgcgtgcg gcgactcgaa ggtgcagccg ggcgaaacgt gcgacgacgg cggcacggcc
     2701 gacggcgacg gttgcagcgc tcaatgtcgc gtcgagccgg gatttcgctg cacgcagccc
     2761 ggcaagccgt gcatcgtcgt ggccgcgtgc ggcaacggca cgaaagaagg cggcgaggag
     2821 tgcgacgaca cgaacgtgac gtccggcgac ggctgctcga gcacctgcca cgtcgagctc
     2881 ggctgggtgt gtgccacgcc gggaatgcct tgcaggaaga cggtgtgcgg cgacggtaag
     2941 aaggagggca cggagtgctg cgatgacggc aacaccgttc ccatggacgg ctgcacgtcg
     3001 gattgtcact gcgagccgac ctgccccgcc atcggcgcgt gcacgcccaa gtgcggcaac
     3061 ggcatcatcg aaggcaccga ggtgtgcgac gacggcaacg cggcggacgg cgacggctgc
     3121 tcctccacgt gcaagc
//
LOCUS       DATIML010000095         1795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_598912, whole genome shotgun sequence.
ACCESSION   DATIML010000095 DATIML010000000
VERSION     DATIML010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_598912"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VLJ38_01620"
     CDS             <1..466
                     /locus_tag="VLJ38_01620"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU38224.1"
                     /translation="PIVRSLAEDVGELAKDERISVRVECDSPVAARADATYVRTILEN
                     LIDNSLCALRAEGGGSIVVRLTVEPNRAVVSVSDDGPAIEGEARAHLFEPLRSTKTHG
                     LGLGLPIARALARAMRGDLSLDAGGKKLFRLELPLEPGTAPRFADPAEERAA"
     gene            463..1056
                     /locus_tag="VLJ38_01625"
     CDS             463..1056
                     /locus_tag="VLJ38_01625"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU38225.1"
                     /translation="MTRTVLLVEDEPDTRDLLARALERAGFTCVTSDHPDGALKLAAQ
                     TPFVDVVVTDVVMGGDDRAGLRLLPALRSAGVHAPVVVITAFADVQKVKLALNDGAAY
                     FLEKPFRAPELIDAIERACEPRGASSHAVGELLARARLTEKERAIALLLLQGLSSAEI
                     AVLEDNSEKTIRQHLTKIYAKCGASNRAELFCKVYAR"
     gene            complement(1103..>1795)
                     /locus_tag="VLJ38_01630"
     CDS             complement(1103..>1795)
                     /locus_tag="VLJ38_01630"
                     /inference="COORDINATES: protein motif:HMM:NF024783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSU38226.1"
                     /translation="HRAGSRPGDVPDPSARRHVLRFEISGEALASFREAMAKIRREAG
                     EALVVDMAECDGQHIGHVETVAPGVHVDAHVGTAEKPTRATQSIPPALRRQVLRRDGG
                     RCQVPGCRHATFVDVHHLRPRSERGANTIENVVTLCGAHHRASHAGKLSSEGTPSAGL
                     RFLHPDGTPYGHAPSPALAELRARAYRALMHLGFRESEAKWALARASLTANVTLEDLI
                     RQTLRELAPDRH"
BASE COUNT          289 a          618 c          599 g          289 t
ORIGIN      
        1 gcccatcgtg cgctcgctcg ccgaggacgt gggcgagctc gccaaagacg agcgcatcag
       61 cgtgcgcgtc gagtgcgatt cgcccgtcgc ggcccgagcg gacgcgacct acgtccgcac
      121 gatcctcgaa aacctcatcg ataacagctt gtgcgcgctg cgtgcagagg gcggcggaag
      181 tatcgtggtg cgcctcacgg tcgagccgaa ccgcgccgtc gtctcggttt ccgacgacgg
      241 accggcgatc gaaggcgaag cgcgcgcgca cctgttcgag ccgctgcgtt ccaccaagac
      301 gcacggcctc ggcctcggcc tacccatcgc gcgcgccctc gctcgcgcca tgcgcggcga
      361 tctcagcctc gacgctggag gcaaaaagct cttccgcctc gagttaccgc tcgagccagg
      421 cacggctcca cgcttcgcgg accccgccga ggagcgcgcc gcatgacgcg caccgtgctt
      481 ctggtcgaag acgagccgga cacccgcgac ctcttggcgc gagcgctcga gcgcgcggga
      541 ttcacctgcg tcacgagcga tcaccccgac ggcgcattga agctcgccgc gcaaacaccg
      601 ttcgtcgacg tggtcgtcac cgacgtcgtc atgggcggcg acgatcgcgc cggtttgcgg
      661 ctcttgccgg cgctacggag cgcaggcgtg cacgcaccgg tcgtcgtcat cacggcgttc
      721 gccgacgtgc agaaggtgaa actcgcgcta aacgacggcg ccgcctactt cctcgaaaag
      781 ccctttcgcg cgcccgagct catcgacgcc atcgaacgcg cctgcgagcc gcgcggcgcc
      841 tcgagccacg ccgtcggcga gctcctcgcc cgcgcacgcc tgaccgagaa ggaacgcgcc
      901 atcgcgttac tcttgctgca aggcctctcg tccgccgaaa tcgccgtgct cgaagacaac
      961 agcgaaaaaa ccattcgtca gcatttgacg aagatttatg cgaagtgcgg ggcgagcaat
     1021 cgcgcggagc tgttttgtaa ggtttacgcg cggtgacgca gccggcgctg tgtggtgctg
     1081 ctcccccgcc cgcgccgtaa cgttagtgcc ggtctggagc cagctcgcgc agcgtttggc
     1141 ggattaggtc ttcgagcgtg acgttggcag taagagaagc acgagcgagc gcccatttcg
     1201 cctccgactc gcggaagccc aggtgcatga gggcgcgata ggccctcgcg cgtagctcgg
     1261 cgagagcggg tgagggtgcg tgtccgtaag gcgtgccgtc agggtgcaga aagcggagac
     1321 ccgcggacgg tgtcccttcg ctcgaaagct ttccggcgtg acttgcacgg tggtgcgcac
     1381 cgcacagcgt gacgacattc tcgattgtgt tcgcgccgcg ttcggagcga ggccgcagat
     1441 gatgcacatc gacgaaagtt gcgtgccggc agccgggcac ctggcagcgc ccaccgtcgc
     1501 ggcgcagcac ctggcgccgg agcgcaggcg ggatgctttg cgtcgcgcgc gtgggtttct
     1561 ccgctgtacc cacgtgggcg tccacgtgga cgcccggcgc gacggtttcg acatgcccga
     1621 tgtgctgccc atcgcactcg gccatgtcga ccacgagtgc ttcgcccgct tcgcgccgaa
     1681 tcttggccat cgcttcgcga aagctcgcga gcgcttcgcc ggaaatctcg aagcggagca
     1741 cgtgacgcct ggcgctcggg tccgggacat cgcccgggcg gcttccggca cggtg
//
LOCUS       DATIML010000096         3846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3196938, whole genome shotgun sequence.
ACCESSION   DATIML010000096 DATIML010000000
VERSION     DATIML010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3846
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3196938"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..1270
                     /locus_tag="VLJ38_01635"
     CDS             74..1270
                     /locus_tag="VLJ38_01635"
                     /inference="COORDINATES: protein motif:HMM:NF019429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfuA-like protein"
                     /protein_id="HSU38227.1"
                     /translation="MTAKVHVFVGPTLAAVARPGCEDFVFHGPVAKGDVYRLVSGRPL
                     AIGIIDGYFERVPAVWHKEILFALSEGVHVFGAASMGALRAAELAPFGMVGVGRIFED
                     FTSGRLTDDDEVTIAHADPSLGYRAVSEAMVNIRATLDAAERLGLLEPAERAELVASA
                     KSRFYADRSYAALLPLARTLLGTRGEPFTRWLRDPSQRVDQKKLDALELLGVLRAHRD
                     GRPEPLRVPWSFQHTDAWEQVRLSFVRPDAAPSDRAPLAPGEPLRTLTSDAALLTEQA
                     RLRALEVRSAKRDGYRPSERDLALARAEFQQARGLEDPARLREFLEQRAISATDFDRL
                     MAEEACVRHARLVPEYDLERELADLEVLVGPERPRATPPACEPGALARQLETKRPDAI
                     RLRVGP"
     gene            1332..2267
                     /locus_tag="VLJ38_01640"
     CDS             1332..2267
                     /locus_tag="VLJ38_01640"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU38228.1"
                     /translation="MGRLRASQSNESRTLEAYSLVGRGPTCGVVLKDERVSYEHACLK
                     YVTKGWALRDLGSTNGTWLNGHKVTAGTDVVLRVGDNIAFGESALIWQLEDAEPPEPM
                     AVAVLSGEPATLTDGVILLPSAENPAASIFRSADGGWTLEARDRVRALEPGEVFELDG
                     TSFRFSCPHEWQATAKIQRIRLVTESVLYFDVSDDEEHVSLSVECDGERMPLGRSNAY
                     YFLLTLARLRNADQRAHRDSEAGWTHRDELMDLLKCGEQQLNVWVFRVRAKFASKDFL
                     DYASIVERRDGSGQLRIGVPRNVIRDGSGRAAPLK"
     gene            2383..2724
                     /locus_tag="VLJ38_01645"
     CDS             2383..2724
                     /locus_tag="VLJ38_01645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38229.1"
                     /translation="MVAIVFDRTDSGSIATILLGDTVVVRVEDGAEAGRWTVEASGLL
                     TLDAMERVEADNTNPRERRLHFRATAVGESSLRLAFRGEDARVLDTFLLEVEVHEHLP
                     SSALELLRKRR"
     gene            2857..3585
                     /locus_tag="VLJ38_01650"
     CDS             2857..3585
                     /locus_tag="VLJ38_01650"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSU38230.1"
                     /translation="MDVSPALAPVLRLLPSGGDEGGEDLRSRARRAAVVPNGNEPLAE
                     LWEELVTGREHAVDAFIDDERCFLVTRPARPDERLPALVNPRNRAILTRVLLGEPQKH
                     VAYEFGVSASSITSIAKQYAQAMGFESSVSRLPIFLVVAAHAAARGLTEAMAASATFE
                     HDGVRHRVLCAARPDPARWANLSEKECEVVTLLVERYPNADIARLRQRSPRTVANQLS
                     SVMHKTGARGRCEIIYRMLEGRAS"
     gene            complement(3580..>3846)
                     /locus_tag="VLJ38_01655"
     CDS             complement(3580..>3846)
                     /locus_tag="VLJ38_01655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38231.1"
                     /translation="ESIPHARALFGAGFLVSTLFETLAPVALFSRAFRRLFVLFALAF
                     HTANLVLMNIEFTLNCVVVVLLLVDWQPVPARRANQPRAAPQAL"
BASE COUNT          636 a         1270 c         1323 g          617 t
ORIGIN      
        1 tcgagcctgc gcgcgacgtt ccggggtgtg tccctggacg tcgcgcccag gccgctctcg
       61 cccggagggc cgcgtgacgg ccaaggtcca cgttttcgtc ggcccgacgc tcgcggcggt
      121 ggcgcgtccc ggctgcgagg atttcgtgtt ccacggtccg gtcgccaagg gtgacgtgta
      181 ccgcttggtt tcgggtcgcc cgctcgcgat cggcatcatc gacggctact tcgagcgcgt
      241 ccccgcggtg tggcacaagg aaatcctgtt tgcgctgtcc gagggcgttc acgtcttcgg
      301 agcggccagc atgggagcac tacgcgcggc ggagctcgcg ccgttcggca tggtgggtgt
      361 cgggcgcatc ttcgaggact tcacgagcgg acggctgacg gacgacgatg aggtcacgat
      421 cgcccacgcc gatccgagcc tcggttaccg agcggtgtcc gaggcgatgg tcaacatccg
      481 cgcgacgctc gatgccgccg agcgactcgg actgctcgag cccgcggaga gggcagagct
      541 cgtggcctcg gcgaagagcc ggttttacgc cgatcgcagc tacgcggcgc tcttgccgct
      601 cgcccgcacg ctgctcggta cgcgcggcga gccgttcacg cgctggcttc gggacccaag
      661 ccagcgcgtc gatcagaaga agctcgatgc tctcgagctt ctcggcgtgc tgcgagcgca
      721 tcgcgacggc cggcccgagc ctctccgggt cccctggagt ttccagcaca cggacgcgtg
      781 ggagcaagtg cgcctgagct tcgtgcggcc cgatgccgct ccgagcgatc gggcgccgct
      841 cgcgccgggc gagccgctac gcacgctcac gtcggacgct gcgctcctca ccgaacaggc
      901 gcgcctgcgg gcgctggaag tccggtcggc gaagcgtgat gggtaccgtc cgagcgagcg
      961 cgacttagcg cttgcccgcg cggagttcca gcaggcgcgc gggctcgaag accctgcgcg
     1021 cttgcgggag tttctggaac aacgagccat ttccgcgact gacttcgacc ggctcatggc
     1081 ggaagaagcc tgcgttcgac acgcgcggct cgttccggaa tacgatctcg agcgcgagct
     1141 cgccgatctt gaggtcctgg tcggtcccga gcggccccgt gccacgcctc cggcgtgcga
     1201 gcccggagcg ctcgcccggc agctcgagac gaagcgcccc gacgcgattc gcctgcgagt
     1261 cgggccataa ctctcgacag gctgacccct tttgcgaagt tccgggctcg catggcaaca
     1321 tcggggcagc agtgggtcgc ctgcgagcca gccagtcgaa cgaaagccga acgctcgagg
     1381 catacagcct ggtcgggcgc gggccgacgt gcggtgtcgt actcaaagac gagcgcgttt
     1441 cctacgagca tgcgtgcctg aagtacgtga ccaagggttg ggcgctccgc gacctcggca
     1501 gtacgaacgg cacctggctg aacggtcaca aggtcaccgc cggcaccgac gtcgtcttgc
     1561 gcgtcggcga caacatcgcc ttcggagaaa gcgcgctcat ctggcagctc gaagacgcgg
     1621 agccgccgga gcccatggcc gtggcggtgt tgagcggcga gcccgcgact ttgaccgacg
     1681 gggtcatcct gctgccgtcg gccgagaacc cggcggcgag catctttcgc agcgccgacg
     1741 gcggctggac gctcgaagcg cgtgatcgcg tgcgcgcgct cgagcccggc gaggtcttcg
     1801 agctcgatgg cacctcgttc cgcttctcct gcccccacga atggcaggcc acggctaaga
     1861 tccagcgcat caggctggtc accgagagcg tcctctattt cgacgtgtcg gacgacgaag
     1921 agcacgtctc gctcagcgtc gaatgcgacg gcgagcgcat gccgctcggc cgttcgaacg
     1981 cgtactattt cctgctgacg ctcgcgcgcc tgcgcaacgc cgaccagcgg gcgcaccgcg
     2041 acagcgaagc tggttggacc caccgcgacg aattgatgga cctgctcaaa tgcggcgagc
     2101 aacagctcaa cgtgtgggtg ttccgcgtcc gcgccaagtt cgcgagtaag gatttcctcg
     2161 actacgcctc gatcgtcgaa cgacgcgatg gctcggggca actgcgcatc ggcgtgccgc
     2221 ggaacgtcat ccgcgacgga tcaggccgcg cggccccgct gaaataagct gaaatggccg
     2281 ggtctcgcgc cggcacctac gctcgccgca tgaccctgac ggcacccgcc gggcgagctg
     2341 acgaactaga accgctgcgc gtcgacgccc gggtctgagc gcatggtggc gatcgtcttc
     2401 gatcggaccg actcaggctc gatcgccact atcctgctgg gggacaccgt cgtcgttcgc
     2461 gtcgaagacg gcgccgaagc tgggcgttgg acggtcgaag ccagcggcct gttgacgctg
     2521 gatgcgatgg agcgcgtcga ggcggacaac acgaatccga gggaacgacg gctccacttc
     2581 cgcgctacgg cggtcggtga aagcagcttg cgactcgcgt tccgcgggga ggacgctcgc
     2641 gtgctcgaca cgtttttgct cgaggtagag gtgcacgagc acctgccgtc gagcgctcta
     2701 gaactactgc gcaagcggcg ttgagctccg ccgagacctg gtctttggcg cagggccgac
     2761 ttgcaacagg ctgtaatggt ttctgcgtga ggggttcggt acacgcatgg tatgcggtct
     2821 tcaacgaacc agggtcagtt tcgtgtcgca cgcttcatgg atgtttcgcc agcgctcgcg
     2881 cctgtactca ggctcctgcc gagcggcggg gacgaaggcg gcgaggatct tcgcagtcga
     2941 gcccggcgcg cggcggtggt gccgaacggg aacgagccct tggcagagct ttgggaagag
     3001 ctcgtcacgg gccgcgagca cgccgtcgac gctttcatcg acgacgagcg ctgctttctc
     3061 gtcacgcgcc ccgcgcgtcc cgacgagcgg ctgccggcgc tcgtcaatcc gcgaaaccgc
     3121 gccatcctca cgcgcgtgct gctcggcgaa cctcaaaagc acgtcgccta cgaattcggc
     3181 gtttcggcgt ccagcatcac gagcatcgcc aagcagtatg cgcaagcgat gggtttcgag
     3241 agctcggtca gccggctgcc gatcttcctg gtcgtggcgg cgcacgcggc agcgcgcggc
     3301 ctgaccgaag caatggccgc gagcgccacc ttcgagcacg acggcgtgcg gcatcgcgtc
     3361 ctctgtgcgg cacggcccga ccccgcgcgc tgggccaacc tctccgagaa agaatgcgag
     3421 gtcgtcaccc tgctcgtgga gcgttacccg aacgccgaca tcgcgcgctt gcgccagcgc
     3481 tcgccgcgta cggtcgccaa tcagctgagc agcgtgatgc acaagaccgg agcgcgcggc
     3541 cgctgcgaga tcatctaccg aatgctcgag ggaagagctt catagagcct gcggggcggc
     3601 gcgcggctga ttcgcgcgac gggccgggac cggctgccaa tcgaccaaga gcagcaccac
     3661 gacgacgcag ttcagcgtga actcgatgtt catgagcacg aggttcgccg tatggaaggc
     3721 gagggcgaag agcacgaaca gtcgccgaaa agcgcgggaa aatagtgcga cgggtgcgag
     3781 cgtttcgaac agcgtggaga cgagaaatcc ggcgccgaag agcgctcgag cgtgcgggat
     3841 gctttc
//
LOCUS       DATIML010000097         2951 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1464752, whole genome shotgun sequence.
ACCESSION   DATIML010000097 DATIML010000000
VERSION     DATIML010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2951
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1464752"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..1901)
                     /locus_tag="VLJ38_01660"
     CDS             complement(207..1901)
                     /locus_tag="VLJ38_01660"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HSU38232.1"
                     /translation="MTDPVRAAPSRRIVALVTPELLIELVSATVAVHARGPWGVVLAE
                     PTAVKGTSDEALRPNARLDAVSASARRCGVRAGQTLAEARALIAGFAVEKLQPIAVER
                     ALSAIAEVALGFGATVSVGLPDTVWVDVSASAHLFGGEAALTEELAERVRALGHTVRV
                     AVAEGPALARAVARWAPPNVNGKAFHCVPPEAAAEAVSSLPVVALPLSDECQEFLVRL
                     GVLTLGDLAALPRATIASRLAGEVGRALDLARGSDPTPLVPYQLPELIVEEVSFEYGL
                     EGSEPLLFALRGVAARLAARLAGRGVAAEKLVLELDHDRSIARLRAGKDRTKLVFALS
                     SPLTREDELRRVVSSRLERTRLPAPTVALRLVAPVVVSATARQLELGDTLAGKTDIEK
                     ELPLVIAEIAADIGETKVGVLKILDAHRLEARSTLVPALPPKPRAPGRGVPRRGPGPR
                     SATPLSVHVSGTPLEVVEGMSPFEARAPLTRLLPAPVRFEGALRIGATVAFERQLFTI
                     EALRFEHRLHAVEWWNGAPVTRDYIRVWLRSTESLIEAVVYVDRANGKRYLQAVAD"
     gene            complement(1948..2712)
                     /locus_tag="VLJ38_01665"
     CDS             complement(1948..2712)
                     /locus_tag="VLJ38_01665"
                     /inference="COORDINATES: protein motif:HMM:NF012381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase A"
                     /protein_id="HSU38233.1"
                     /translation="MFSVVALPAALAHLSPRLVQVGSLEPDATGGPAQAVPFGFEELD
                     QLLPDGGVLRGSVVELAIAGSGLGTTLGLAAVRAFQAREAASFGTRVKPWCAFVDASS
                     TLYAPGVAASGVALERLLVVRPPVEAVSRVALKLAESGVFELVVVDLLGTLGQALDFP
                     LARFGRVVRRLSMAVDGTNKSVLLLTDARVERALPLPVAQRIELTRSAIDRLSARIAK
                     DRRGRVSAQRPLVWTRGSAVLEPAASEGTADVRKLA"
BASE COUNT          541 a          999 c          982 g          429 t
ORIGIN      
        1 gccatgccag cggagccgct cgtcgtcccg ccggtgcctg ccgccatggt cggcgtgccg
       61 gcacccccac cggtgccagc cttgctatct gaatcgtcgt cgccgctcga gcagtggacg
      121 aggaagagcg acgaagtaac gagcagcgga atcaggaagc ttcggtgacg catagcgcgt
      181 cgaggatagc ttcaaaattg ctgaattcaa tccgcgactg cttggagata gcgcttaccg
      241 tttgcacggt cgacgtaaac tacggcttca atcaggctct cggtcgagcg gagccagacg
      301 cggatgtagt cgcgtgtcac gggcgcgccg ttccaccact cgacggcgtg taggcgatgc
      361 tcgaaacgga gcgcttcgat cgtgaagagt tgtcgctcga atgccacggt cgcgccaatt
      421 cgcaacgcgc cctcgaagcg tactggtgca ggcaaaagcc gcgtgagcgg cgcgcgggcc
      481 tcgaagggac tcatgccctc caccacctcg agaggtgtgc cggaaacatg cacggaaagc
      541 ggcgtcgccg aacgggggcc agggccgcgc cgtggcacgc cgcgaccggg tgcgcgtggt
      601 ttcgggggca gcgccgggac gagcgtgctg cgcgcctcga gccgatgcgc gtcgaggatc
      661 ttgagcacgc ccactttcgt ttctccgatg tcggccgcga tttcggcgat gacgagcggg
      721 agctcttttt cgatgtcggt tttgcccgcg agcgtgtcac cgagctcgag ttggcgcgcc
      781 gtggcggaaa cgacgacggg cgcgacgagc ctgagcgcga ccgtgggcgc gggcagtcgc
      841 gtccgttcga gccgggacga gacgacacgg cgtagctcgt cttcccgcgt gagcggcgac
      901 gagagcgcga aaacgagctt cgtgcggtct ttgccggcgc ggaggcgcgc gatcgaacgg
      961 tcgtgatcga gctcgagcac gagcttttca gccgcgacgc cgcgcccggc gagccgagca
     1021 gcgagccgcg ccgcaacgcc acgcaaagcg aacaagagcg gctcgctgcc ttccaagccg
     1081 tactcgaagc tcacctcctc gacgatgagc tccggcaatt gatacggcac gagcggcgtc
     1141 ggatcgctac cgcgcgcaag atcgagcgct cgccccactt cacccgccaa acgactcgcg
     1201 atcgtcgcac gaggcagcgc ggccaaatcg ccgagcgtca gcacgccgag ccgcaccaaa
     1261 aattcttggc actcgtcact gagcggcaga gcaacgacgg gcagcgagct cacggcctcg
     1321 gccgccgctt ccggcggcac acagtgaaac gctttgccgt tcacattcgg gggcgcccag
     1381 cgcgcgacgg cgcgtgcgag cgcgggccct tccgccacgg cgacgcgcac cgtatggccg
     1441 agcgcgcgca cgcgttcagc gagctcctcg gtgagcgcgg cttccccacc gaaaaggtgc
     1501 gcggaggcgc tcacgtcgac ccacaccgtg tcgggcaaac cgaccgaaac cgtcgcgccg
     1561 aagccgagcg ccacctccgc gatcgcggag agcgcgcgct ccacggcgat cggctgcagc
     1621 ttttcgacgg cgaagcccgc aatcaatgcg cgcgcctcgg cgagcgtctg ccctgctcgg
     1681 acgccgcaac gccgagccga ggcgctcact gcgtcgagcc gtgcgttcgg acgcagcgct
     1741 tcgtcgctcg tgcctttcac ggctgtcggc tcggcgagca cgacacccca gggaccacga
     1801 gcgtgcacgg cgacggtcgc actcacgagc tcgatcaaga gctccggcgt gacgagcgcg
     1861 acgatgcgcc ggctcggcgc ggctcgcacc gggtccgtca ccggtggctc gaatgagcgc
     1921 tgctcgcgtg ctgcgttcga aaaaaggtca ggcaagcttg cggacatcgg ccgttccctc
     1981 gctcgctgca ggctcgagca cggcagagcc ccgcgtccac acgagcggac gctgtgccga
     2041 gacgcgaccc cgtcgatctt tggcgatgcg agccgacaag cgatcgatcg ccgaacgcgt
     2101 gagctcgatg cgttgggcga cgggcagcgg caacgctcgt tcgacgcgag cgtccgtgag
     2161 caggagcacg cttttgttcg tgccgtcgac ggccatggag agcctccgca ccacgcgacc
     2221 gaaacgcgcg agcggaaaat cgagtgcttg accgagcgta cccaggagat ccacgacgac
     2281 gagctcgaag acgcccgact cggcgagctt gagcgcgacc cgactcaccg cttccacggg
     2341 tggacgcacg acgagcagtc tttcgagcgc gacgccggag gcagcaacgc ccggtgcata
     2401 cagcgtgctc gacgcatcga cgaaggcgca ccagggcttg acccgcgtgc cgaaactcgc
     2461 agcctctcgc gcttggaagg ctcgcacggc ggcaagcccg agcgtggtgc cgaggccgct
     2521 acctgctatc gccagctcca cgacgctgcc gcgcaaaacc ccgccgtccg gcagtagctg
     2581 atcgagctcc tcgaagccga agggtacggc ttgagccggc ccgccggtcg cgtctggctc
     2641 aaggctgccg acctgaacga gacggggaga tagatgggct aaagctgcag gaagcgccac
     2701 aacactgaac ataatgacag ctgccaaaaa ggcaagtgtt cgagtggtgc ttctggacag
     2761 gaaatgtccg agcgaggcgc ctcttcccac ccatttcaaa gagttgcgcg agcgcgcccc
     2821 caccacgcct cggtgctaga aatggcgaag ttgaccaccc tcacgcccct cgagcaaaaa
     2881 ctcgatcgtg cccgcgatct cttgcagcaa tggggctcgg tgctcgtctg cttctcgggc
     2941 ggcatcgaca g
//
LOCUS       DATIML010000098         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_599264, whole genome shotgun sequence.
ACCESSION   DATIML010000098 DATIML010000000
VERSION     DATIML010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599264"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            294..>2059
                     /locus_tag="VLJ38_01670"
     CDS             294..>2059
                     /locus_tag="VLJ38_01670"
                     /inference="COORDINATES: protein motif:HMM:TIGR03396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004629 - phospholipase C activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase C, phosphocholine-specific"
                     /protein_id="HSU38234.1"
                     /translation="MSSSRRDFLRFAAGSLGAAAAAAMLPSSIRRALALPANNRTGSI
                     QDIEHIVILMQENRSFDHYFGTLRGVRGFGDKRSIALPGGQPVWQQPDGTGYVMPFRP
                     HAGDLGLQYMQGTPHNWPDSHGAWNGGRMDAWIPNKGTTTMAYFTREDIPFHYALADA
                     FTICDAYHCSLLGATDPNRYHMWTGWVGNDGQGGGPVVDNSEAGYDWHTFPERLVQAG
                     ISWKIYQDAGAGLDAEHFWGWGDDAYIGNYGDNSLLYFHQYQNAAPGSPLYVGARMAT
                     NVAQGGTLFDIFRADIASGKLPQVSWIVAPEAYSEHGNWPTNYGSWYVSQILDALTDN
                     PEVWSKTAFFLMFDENDGFFDHMVPPTPPSSRAEGLSTVPTTNEHYAGNGGYAPGPYG
                     LGVRVPMLVISPWSKGGWVNSELFDHTSLIRFVEQRFGRQHPDVLETNITPWRRAVAG
                     DLTSAFDFKTPNAAPVSLPNTDGYEPPDDERHLDYVPSPPASPSMPKQEPGVRPARAV
                     PYVPSVLAAVDVERGTLSLRFENLGKSAAVFHVRPTNGGAPATYTVGAGAHLTENYAL
                     KASGETTYDLAVHGPNGFFRSF"
BASE COUNT          352 a          722 c          654 g          331 t
ORIGIN      
        1 aaccctgtgc gtgcgaagaa gaagacgccg ccgaagcgat cgcgcggcgc acgctgacgc
       61 cgcgcttcgc gcagcgcgag agcaatgcgt gacgcgcgtg cgctttcgcg cacgcgtcga
      121 aaaaccgcaa cgcaccgtcc atcaccgcgt catcggtcac gggcacgctt cgcgccggcc
      181 cgagcacggc tcgcaggtcg ccgggccgat ctactgacgc atggcttgcc atgcatccgc
      241 gcgcacgacg cgcggcgatc cgctgcgagc gtcttccggc caggatgccc gccatgtcga
      301 gctcacgtcg cgatttcctc cgttttgccg ccggttcgct cggcgccgcc gcagctgcgg
      361 cgatgttgcc ttcatcgatc cgccgagcgc tcgcgttgcc cgcgaacaat cgcaccggct
      421 cgatccagga catcgagcac atcgtgatcc tgatgcagga gaaccgctcg ttcgatcact
      481 acttcggcac gctgcgcggc gtgcgcggct tcggcgacaa gcgctcgatc gcgctgccgg
      541 gcgggcagcc ggtctggcag cagccggacg gcaccggcta cgtgatgccg ttccgtccgc
      601 acgcgggcga tctcggtctt cagtacatgc agggcacgcc gcacaactgg cccgattcgc
      661 acggcgcgtg gaacggcggg cgcatggacg cgtggatccc gaacaagggc accacgacga
      721 tggcgtactt cacgcgcgag gacattccgt tccattacgc gctcgccgac gcgttcacga
      781 tctgcgatgc gtaccactgc tcgctgctcg gcgcgaccga tccgaaccgc tatcacatgt
      841 ggaccggctg ggtcggcaac gacggccagg gcggcggccc cgtcgtcgac aactcggaag
      901 ccggttacga ctggcacacc ttccccgagc ggctcgttca ggccggcatc agctggaaga
      961 tctatcaaga cgcgggcgcg gggctcgacg ccgagcattt ttggggttgg ggcgacgacg
     1021 cgtacatcgg caattacggc gacaattcgc tgctctactt ccatcaatat cagaacgccg
     1081 cacccggtag cccgctctac gtcggggcgc gcatggcgac gaacgtcgcc cagggcggga
     1141 ccctgttcga catttttcgc gccgacatag cgagcggcaa gctgccgcaa gtctcgtgga
     1201 tcgtcgcgcc cgaagcgtac agcgagcacg gcaattggcc gacgaactac ggctcttggt
     1261 atgtctcgca aatcctcgac gcactcacgg acaaccccga agtctggagc aagacggcgt
     1321 tcttcctcat gttcgacgag aacgacggct tcttcgacca catggttccg ccgacgccgc
     1381 cgagcagccg cgccgaagga ctctcgaccg tgccgacgac caacgagcac tacgccggta
     1441 acggtggcta cgcgccaggc ccctacggcc tcggcgtgcg cgtgcccatg ctcgtgattt
     1501 cgccgtggag caagggcggc tgggtcaact ccgagctctt cgatcacacg tcgctcattc
     1561 gcttcgtcga gcaacgtttc ggacgccagc acccggatgt gctcgagacg aacatcacgc
     1621 cgtggcgccg cgccgtggcg ggtgatctca cctcggcctt cgatttcaaa acgccgaacg
     1681 ccgcgccggt gtcgctaccg aacacggatg gctacgagcc tcctgacgac gagcggcatc
     1741 tggactacgt gccgtcgccc ccggcctcgc cgtcgatgcc gaagcaggag ccgggcgtgc
     1801 gaccggcgcg cgcggtgccg tacgtgccga gcgtgctcgc ggctgtggac gtcgagcgcg
     1861 gcacgctgag cttacgcttc gagaacctcg ggaaatcggc cgcggtcttc cacgtgcgtc
     1921 ccacgaacgg cggggcaccc gcgacgtaca ccgtcggcgc gggcgcgcac ctcacggaaa
     1981 attacgcgct caaggcgagc ggcgagacga cctacgatct cgccgttcac ggtccgaacg
     2041 gcttcttccg ctcgttcaa
//
LOCUS       DATIML010000099         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_310438, whole genome shotgun sequence.
ACCESSION   DATIML010000099 DATIML010000000
VERSION     DATIML010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310438"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VLJ38_01675"
     CDS             complement(<1..210)
                     /locus_tag="VLJ38_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38235.1"
                     /translation="MSKSDGERGLRSTTLVLMRYGGVSVLTLSAEYEGPLAPFALLLP
                     VPPDVRARAVKTVKRTVLSRVEALSA"
     gene            419..>1578
                     /locus_tag="VLJ38_01680"
     CDS             419..>1578
                     /locus_tag="VLJ38_01680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU38236.1"
                     /translation="MEPLGPSSEALAAFFDAQPAPVLVVDGATLAIVFANSATMRLLG
                     FEPAELAGRHIDDLVPDQLRAGYQTLRAASNGHDSTPFLQGERVFCTKAGRELPISLS
                     VTRVRVGDADYRVASLLDLSGQHETEQETLEQYRRAEDALAVAKKSLSESEEKFEKAF
                     AASPHPICITEVATGVLLDVNDAFERVFGYTRAESLGKSTVALGVWDDPSERERVIAS
                     LRERPSFRDWDTTGRDRNGRELRLVLSGEVIDVRGRPTLVTYVNDVTEREAAKRALVE
                     SEALFARAFRASPDALVVFHFETGRIIEVNDGFERLFGRARADVVGHTELELELWTDE
                     LERQRAREILIDERTLRDFPIVARAASGTLKECLLSAEHIELSSGRSVIAIVR"
BASE COUNT          269 a          523 c          536 g          250 t
ORIGIN      
        1 cgcgctgagc gcttcgacgc gactgagcac ggtgcgcttc acggtcttga ccgcgcgagc
       61 gcgcacgtcc ggcggcaccg gcaagagcaa cgcaaaggga gcgagcggtc cctcgtattc
      121 ggccgacagc gtcagcaccg aaactccgcc gtaacgcatg agcacgagcg tggtcgagcg
      181 caggcccctc tcgccgtcgg acttcgacac gaggacaccc ggaaacgcgg tcgtaggctg
      241 cgaaatggag aaaacgacga gcgcgagcgc aagagcgagc acggttcgcc cgcgggctcg
      301 tggctcgcgt tcacgcaacc gggctcgact ggagctcacc ggacacgtat agtccggcgc
      361 agggttccgg ctcgcgcttt tcgaaagcgg ggcaccctca tgtcacatgt ccctgcgaat
      421 ggagcccttg ggtccgagct cggaggcgct ggccgctttt ttcgacgctc agccggcgcc
      481 cgtgctcgtg gtggacggcg ccacgctcgc gatcgtgttc gcgaactcgg ccacgatgcg
      541 gctgctcggc ttcgagccgg cggagcttgc cggccggcat atcgacgacc tcgtgcccga
      601 ccagctgcgc gcgggttacc aaacgctgcg tgcagcatcg aacggccacg attcgacgcc
      661 gttcttgcaa ggcgagcgtg tcttctgcac caaagcgggg cgcgagctgc cgatctcgct
      721 gtccgtaacg cgcgtccgtg tcggcgacgc ggattatcgc gtcgcgagct tgctcgatct
      781 ttcagggcag cacgagacgg agcaggagac gctcgagcag tatcgccgcg cggaagacgc
      841 gctcgccgtc gccaagaaga gtctctccga atccgaggag aaattcgaaa aagcgttcgc
      901 cgcgagtccc caccccatct gcatcaccga ggtcgcgacg ggcgtcctgc tcgacgtcaa
      961 cgatgccttc gagcgcgtgt tcggctacac gcgcgcggag tcgctcggca agagcacggt
     1021 cgcgctcggt gtctgggacg atccgagcga gcgcgagcgc gtcatcgcga gtctgcgcga
     1081 acggccgtcg ttccgtgatt gggatacgac gggccgggat cgcaacggac gcgagctccg
     1141 gctcgtcttg agcggcgagg tgatcgacgt ccggggacgc ccgacactcg tgacgtacgt
     1201 gaacgacgtg accgaacgcg aggcggccaa gcgcgccctg gtcgagtcgg aggcgctctt
     1261 cgccagagcc ttccgcgcga gccccgacgc gctcgtcgtc ttccacttcg aaaccggacg
     1321 catcatcgag gtcaacgacg gcttcgagcg tctgttcggc cgcgcgcgcg ccgatgtcgt
     1381 ggggcacacg gagctcgagc tcgagctctg gacggacgag ctcgaacgcc agcgcgcacg
     1441 tgagatcttg atcgacgagc gcacgttgcg tgactttccg atcgtcgcgc gggccgcgag
     1501 cggcacgctc aaagagtgtc tcttatcggc cgagcacatc gagctctcga gcggccgctc
     1561 ggtgatcgcc atcgtgcg
//
LOCUS       DATIML010000100         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2619841, whole genome shotgun sequence.
ACCESSION   DATIML010000100 DATIML010000000
VERSION     DATIML010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2619841"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1605)
                     /locus_tag="VLJ38_01685"
     CDS             complement(<1..1605)
                     /locus_tag="VLJ38_01685"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HSU38237.1"
                     /translation="MRPSEIARALDRLGYAPHPSLSAQRDGERRSDRALWVRLGLAGA
                     LAGNVMLMALALYSGAAADPAYASLFRWGSCLLTFPAVFFCGSVFLRGALASIRTRTP
                     HMDLPIGIGIVTGFARSAWNTALGSGEVYFDSLAVLIFLLLVGRWLQARHHRGATQTL
                     DLIAALAPATALRIDGEPREVPADALPVGALVEVARDDRIPVDGIVVTGESCVDTAWL
                     TGEALPEAVKPGDRVYAGTVNLAAPLQLRVEVAGRETRLGRLMRSVEEAQAHRAPIVR
                     LADRVAGYFVVAALGLALVTFALWQYLDPTRALDHAVALLVVTCPCALGMATPLAVSV
                     ALKRAAAAGIFFKGGEFLEALARPGTLVFDKTGTLTEGRLALASFTGDPQVLPLLRAA
                     EQRSGHPVARAVVAAVPAGTALAVEDVSEFPGAGVAARVDGHAVRVGSAAFLGDALSG
                     SDVEFELELGAQAALGRPAIAVAVDGKVKGVLAFTDPLRADARASLDALRAAGYRIGV
                     LSGDQPLVVGRVASELGPLVAVEGGKS"
BASE COUNT          284 a          616 c          603 g          201 t
ORIGIN      
        1 gctcttccct ccctcgacgg cgacgagtgg tccgagctcg ctggcgacac gcccgacgac
       61 gagcggctgg tcccccgaga gcacgccgat gcggtaaccg gcggcgcgca gcgcgtcgag
      121 gctcgcccgg gcgtccgcgc gcaatggatc ggtgaacgcg agcacgcctt tcaccttgcc
      181 gtcgacggcg accgcaatcg cgggccggcc gagcgccgcc tgcgcgccga gctcgagctc
      241 gaattccacg tcgctacccg acagcgcatc cccgaggaac gcggccgagc cgacgcgcac
      301 ggcgtgaccg tccacgcgcg cggcgacacc cgcgcccgga aattcgctca cgtcttcgac
      361 cgctagcgct gtgccggccg gcaccgcagc cacgacggcg cgcgcgacgg ggtgacccga
      421 gcgttgttcg gcggcgcgca gcaacggcag gacctgcggg tcgcccgtga aggacgcgag
      481 cgcgagccgg ccctcggtca gcgtgccggt cttgtcgaac acgagcgtgc caggacgcgc
      541 gagcgcttcg aggaattcac cccccttgaa gaagatgccc gcagcggccg cgcgcttgag
      601 ggcgacgctc accgcgagcg gggtcgccat gccgagcgca caagggcagg tcacgaccag
      661 gagcgcgacc gcatgatcga gcgcccgcgt ggggtcgagg tactgccaga gcgcaaacgt
      721 gacgagcgcg agaccgagcg ccgcgacgac gaagtagccc gcgacgcgat cggcgagacg
      781 gacgatgggc gcgcggtgcg cctgtgcctc ctcgacgctc cgcatcaagc gaccgaggcg
      841 ggtttcgcgc ccggctactt cgacacgcag ctggagcggc gccgcgaggt tcacggtgcc
      901 cgcgtacacc cgatcgccgg gtttaaccgc ctccggcagt gcttcgcccg tgagccacgc
      961 cgtgtcgacg cagctctcgc ccgtgacgac gatgccgtcc acggggatgc ggtcatcgcg
     1021 ggccacttcg acgagggcgc cgacggggag cgcgtcggcc ggtacctcgc gcggttcgcc
     1081 gtcgatgcgc agcgccgtcg ccggggcgag cgctgcaatc agatcgagcg tctgcgtcgc
     1141 gccgcgatga tggcgcgcct gcagccagcg cccgacgagc aagagaaaga tcaggacggc
     1201 gagggagtcg aagtacactt cgccgctgcc gagcgccgtg ttccacgcgc tccgcgcaaa
     1261 gcccgtgacg atgccgatgc cgatcggcag atccatgtgc ggcgtgcggg tgcggatcga
     1321 ggccagagcg ccacgcagaa agacgctgcc gcagaagaac accgcgggaa acgtgagcag
     1381 gcagctgccc cagcgaaaca agctcgcgta ggccggatca gccgccgccc cactgtagag
     1441 cgccagcgcc atgagcatga cgttgcccgc gagtgctccc gcgagaccga gccgcaccca
     1501 aagcgcgcgg tcgctccggc gctcgccgtc acgttgtgcc gagaggctcg ggtgcggcgc
     1561 gtaaccgagc cgatcgagcg cacgcgcgat ttcactgggg cgcacgctcg ccggctcgaa
     1621 aatgacttcc agcgcgctcc gaccaacgtc gaatcgcgcg gagcgcacgc cctcttgcac
     1681 gcgcggcagc cgctcgagga gcca
//
LOCUS       DATIML010000101         6723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4930935, whole genome shotgun sequence.
ACCESSION   DATIML010000101 DATIML010000000
VERSION     DATIML010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6723
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4930935"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..532
                     /locus_tag="VLJ38_01690"
     CDS             <1..532
                     /locus_tag="VLJ38_01690"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSU38238.1"
                     /translation="GSGSLEILGRVEGDVSVTGEVVLGEESAVRGSVTGSHITVSGAV
                     QGDVRGSEAVLLERGARVVGDLTAPRIGVMTGALVKGVVRTDGEPALGAPRRPATTIA
                     ARSPGFPARAAAAPPPPAPPKSEPREPEREPEEALESEPAPAPKDAKPAREAPPPPVV
                     PALAKGAKAKKKKRED"
     gene            603..1319
                     /locus_tag="VLJ38_01695"
     CDS             603..1319
                     /locus_tag="VLJ38_01695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38239.1"
                     /translation="MRASGLAMGGGLLGVLLLVSSARAATDNKERPLTTNEIEGWLEA
                     EPGGAPADQGTTPGAEEPLPAPRRHGFVVESGLGFVTQVGSLKHIAPTAPDFQLRLGY
                     EVLHWLMPFVEGDVAFASTAYASEPPPPRSYYHYGAGAGVRFTVPVSRLFALLAQGSV
                     GFARVSEQNVLSVYGFPHADNPNLYYGGELGLEWYQVSPHLALAVHAGVKSYGQGLTR
                     DRGGDAPLAIVGSAALRYAF"
     gene            1452..2099
                     /locus_tag="VLJ38_01700"
     CDS             1452..2099
                     /locus_tag="VLJ38_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HSU38240.1"
                     /translation="MPPAPDAPEGPGDVDSDLAESLQALKAAFERRVLPAQFGKAEQA
                     RVDLLRSRLRVPRRFREFLLAADPIDVETRTPAERVRLVPSAKLLEEQHGLCLADDGS
                     ARSGPSPSGWRPSWVVIAHSALLGDPYFLDVASPDAEGDCPVFTAMSGTDNWKPRLCA
                     SSFATFLRILAIGMEVAKNFPDRDVDMDDEQVFREQLGPRIREYDPAAAKAGHWT"
     gene            2096..3394
                     /gene="hisD"
                     /locus_tag="VLJ38_01705"
     CDS             2096..3394
                     /gene="hisD"
                     /locus_tag="VLJ38_01705"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HSU38241.1"
                     /translation="MSAPAELFAVVVEGTAEFDALLAKLGRRGESDLARVEPAVREIL
                     EAVRGGGDRALATLVERFEGRRPERFFVRDYGGAAALAGLPAAVRDALERASARIRRY
                     HERQREGLFGFEYEEEGVRLGSRVLPIERVGVYVPGGKARYPSSVLMSAIPAAVAGVA
                     DIIVASPDTSAEVRAACHLAGVHALLDAGGAQAIGALAYGTESVPRVSKIVGPGNIFV
                     AAAKRLVFGEVAIDSIAGPSEILVVADDSADAAIIAADLLSQAEHDEAAYPLLVTTSR
                     ALVDAVRSELSRQLATQPRRRIAEISLREHGAALVVRSPERLSAVAHELAVEHVAVQT
                     HEPRRTADAIRAAGALFVGSNTPEAAGDYLAGPSHVLPTGGAARYASPLGVYDFVARS
                     SIIEYTREALAAQSEAIAAFARAEGLEAHARAVEIRTSKS"
     gene            3532..>6723
                     /locus_tag="VLJ38_01710"
     CDS             3532..>6723
                     /locus_tag="VLJ38_01710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38242.1"
                     /translation="MKLSSRLARSAVASLFALVGATSCAQERAPINRVQPDALDKSFF
                     VGKLDDESDDPEFYKRGTVVSVDYGAAQDGLFTATYGQPLSRIRWEITETALNARLSY
                     ERISGTDATGQAMNGAGLPTRAGQIVASYAITSHFDIKRDYNPQTGEPLNVVVENSTD
                     KPWYAREFMRVDWSKNLITDAYDYDTLAQTGIYGGVDYEPTSYTVLDPSDPDAPMFAP
                     DEGYFDVTNKVYATPQSVDVSSLGIGLDTMPACWLGGEFHGGTAPSGNCNPVQLTIRE
                     SFRKITDHDYEPTDEDGYRFQTLGAFNVERQGYDRSYGQIDTNWHRFISRYNIWQRSH
                     FYANPERMTGPVACATKETTEDPTGDPNADPNRDLDGDGTADECQAAGPGSRCDIFSH
                     KCTLPFSQRKTVTVPWYLAGDASYFDPTDWGVEEWDLALKTAVQTARLTECRRAGGGN
                     CDADYPMWRGQQDDNEEAVAISREFDACQRARGWGEKSCTDDVRAAARALAAARGNAD
                     DPSTLAIGEIVSMPPVLTLCHDPVQTSDHPACGPRGLAPRLGDIRYHIVDAIENPQTP
                     SPWGIMVDADDPLTGEKVAGSMNIWTYVTDTAAQTLVDLVRYANGELSTAAITNGQYV
                     ENYAGAVKLAGAGGLPTLTSAQINERLAAATKLDAKSFAAMAKTPPSDDVQRLLNAAK
                     ARVLDVAASSQVASPALARAATTLGSARGTPLESALLNAPMLQLVGLGGNVPAGGSLM
                     NVVSPLALNNPMMRARLSEMRENALAERGACIVSEAPEPSSLSGLADIMARKFPRGDN
                     ETAAGTKDRNQRMLDYVKRRYHYGVLAHEMGHSIGLRHNFVSSAAPLFYRPQYWQLRT
                     KNGSVSTACKDAVTDGSTCVGPRYFDPVTDEEQSQLIWMFMQSTVMDYPGEVAQDMLG
                     LGVTDFAAARFFYGDTSSVYTDSHYLAGTAVGTGISAATDTFGGLIGIRYGVRAGGLG
                     ANGVNEFHYSALQKSYGLIHDCYDVSPEPPASWNEAVDGVWDPVLDGHTVSIDGQPTK
                     CREQQVDYVPYSNLRMPSTSELNGAYYRGGPSVD"
BASE COUNT         1117 a         2347 c         2257 g         1002 t
ORIGIN      
        1 cggcagcggc agtctcgaaa tcctgggccg cgtcgaaggc gacgtgagcg tcacgggcga
       61 agtcgtgctc ggcgaagaga gcgcggtgcg cggaagtgtg acggggtcgc acatcaccgt
      121 ctcgggcgcc gtgcagggcg atgtgcgcgg cagtgaagcc gtgctgctcg agcgcggcgc
      181 gcgcgtggtc ggtgacctca cggcgccgcg catcggcgtg atgaccggag cgctcgtgaa
      241 gggcgtcgtg cgcacggacg gcgaacctgc gctcggcgcg ccacggcggc ccgccacgac
      301 gattgctgcg cgatctccgg ggtttccggc tcgcgccgct gccgcaccgc caccgcccgc
      361 accgccaaag tccgagccac gagagccgga acgagagccg gaggaagcgc tcgagtccga
      421 gcctgcgccc gctccgaaag acgcgaaacc tgcgcgcgaa gctccgccgc cgccagtcgt
      481 gcccgccctc gccaagggcg ccaaagccaa aaagaagaag cgcgaagact gagtcttctt
      541 tctggaggcc ggcgcgccga atcaaggaca gcgcggctcg agccggtgta cgctggcggg
      601 tgatgcgcgc gtcagggctc gcgatgggcg gtggactcct cggggtgctt ctcctcgtgt
      661 catcggcgcg agcggcgacg gacaacaaag agcgcccgct caccacgaac gaaatcgagg
      721 gctggctcga ggcggaaccg ggcggagcgc ccgcggatca gggcaccacg cccggcgccg
      781 aggaaccgct acctgcccca cgccgccacg gcttcgtggt cgagagcggg ctcgggttcg
      841 tgacgcaagt cggctcgctc aagcacatcg cgccgactgc gcccgacttc caactgcgcc
      901 tcggctacga ggtgctccat tggctgatgc cgttcgtcga gggcgacgtg gcgttcgctt
      961 cgaccgcgta tgcgagcgag ccacccccgc cacggtcgta ctatcactac ggagccggcg
     1021 ccggcgttcg cttcaccgtc cccgtgagcc gcctcttcgc gctgctcgcc cagggtagcg
     1081 tcggtttcgc gcgtgtctcc gagcaaaacg tgctctcggt ctacggcttc ccgcacgccg
     1141 acaatccgaa cctctattac ggcggcgagc ttggcctcga gtggtaccaa gtgagcccgc
     1201 acctggcgct cgccgtgcac gcgggcgtaa aaagctatgg gcagggcctc acgcgtgacc
     1261 gcggcgggga tgcgccgctt gccatcgtcg gaagcgccgc gctccgctac gccttctgaa
     1321 gagacgcgcc gacgatcgcg agccgaaacc ggccgtccgt ctggtcgcgt ttcccataaa
     1381 aacgtcgcgg agctgcttgc ttcccgagcg gacggcagta agaaggtggc ttctttccga
     1441 atggttaccc ggtgccaccg gcgccggacg cccccgaagg tcccggcgac gtggacagcg
     1501 atctcgccga atcgttacaa gccctgaaag ccgccttcga gcggcgcgtg ttgccggcgc
     1561 agttcggtaa ggccgaacag gcgcgcgtcg acctcttgcg cagccggctg cgggtgccgc
     1621 gacgcttccg tgagttcttg ctcgccgcgg atcccatcga cgtggagacg cgcacgccgg
     1681 ccgagcgtgt ccggctcgtc ccgtccgcca agttgctcga ggagcagcac gggctttgcc
     1741 tagccgacga tggaagcgcg cgctcggggc cgagtccgtc ggggtggcgc ccctcgtggg
     1801 tcgtgatcgc ccacagcgcg ctgctcggtg atccctattt tttggacgtc gcgagcccgg
     1861 acgcggaggg cgactgcccg gtcttcacgg ccatgagcgg gacggacaac tggaagccac
     1921 ggctctgcgc gtcgagcttc gccacgttct tgcgcatcct cgccatcggc atggaggtcg
     1981 cgaagaactt ccccgaccgc gacgtcgaca tggatgacga gcaggtcttc cgcgagcaac
     2041 tcggaccgcg cattcgcgag tacgatccgg cagcggccaa ggcgggacac tggacgtgag
     2101 cgcccccgcg gagttgttcg ccgtggtcgt cgaaggcacg gccgagttcg acgcgttgct
     2161 cgccaagctc gggcgccgcg gcgagtccga cctcgcgcgc gtggagccgg ccgttcgcga
     2221 gatcctcgag gccgtgcggg gtggcggcga ccgcgcgctc gcgacgctcg tcgagcgttt
     2281 cgagggccgg cggcccgagc gcttcttcgt gcgggactac ggcggtgccg cggcgctcgc
     2341 tgggctaccc gcggccgtcc gcgacgcgct cgagcgtgcg agcgcgcgca ttcgccgcta
     2401 ccacgagcgc cagcgtgaag gcctgttcgg gttcgaatac gaggaggaag gcgtgcggct
     2461 cggcagccgc gtgctgccga tcgagcgtgt cggcgtgtac gttccgggcg gcaaggcgcg
     2521 ttacccgtcg agcgttctga tgtcggcgat tcccgccgcc gtcgctggtg tggcggacat
     2581 catcgtcgcc tcgcccgaca cgagcgccga ggtgcgcgcg gcctgtcacc tcgccggcgt
     2641 gcacgcgctg ctcgacgccg gcggcgcgca agcgatcgga gcgctcgcct acggcaccga
     2701 gagcgtcccc agggtttcga aaatcgtagg gcccggcaac atcttcgtcg ccgcggcgaa
     2761 gcgtctcgtc ttcggcgagg ttgcgatcga cagcatcgcg gggccgagcg aaatcctcgt
     2821 cgtcgccgac gacagcgccg acgcggcgat catcgcggcc gatctcttgt cgcaagccga
     2881 gcacgacgag gcggcctatc cgctgctcgt cacgaccagc cgcgcgctcg tcgacgccgt
     2941 ccggagcgag ctttcccgtc aacttgccac gcagccgcgg cgccgcatcg ctgaaatttc
     3001 gttgcgggag cacggcgccg ccctcgtcgt gcgctcaccc gagcggctct cggccgtcgc
     3061 gcacgagcta gccgtcgagc acgtggccgt gcagacccat gagccgcgtc gcaccgccga
     3121 cgcgattcgt gcggcaggag cgttattcgt cggctcgaac acgcccgaag cggcgggcga
     3181 ctacctggcc ggcccctcgc acgttttgcc tacaggcggc gccgcgcgtt acgcctcgcc
     3241 gctcggcgtc tacgacttcg tcgcgcgtag ctcgataatt gaatacacac gcgaggcgct
     3301 cgccgctcag agcgaagcga ttgccgcctt cgcccgcgcc gaaggtctcg aggcgcacgc
     3361 tcgcgccgtc gagatccgga cgtcgaagtc ataggcccgc gacatgagca gtctcgaggc
     3421 taggcctcct cgaggctagg tctctgagta gcctaaagtg gttctggagg cgtcgagtag
     3481 cgaggggggc cgtggccggc tatcgttccg atcccctttt ttggaggagc catgaagctt
     3541 tcctcgcgcc tcgcccggtc ggccgtcgca tccctgttcg cgttagttgg agcgacgagc
     3601 tgcgcccagg agcgcgcccc catcaaccgc gtgcagccgg acgcgctcga caagtccttc
     3661 ttcgtcggca agctcgacga cgagagcgac gatcccgaat tttacaagcg cggcacggtg
     3721 gtgagcgtcg attacggcgc ggcacaggac ggcctcttca cggcgacgta cggccagccg
     3781 ctctcgcgga tccgctggga aatcaccgag acggcgctca acgcgcggct gtcctacgag
     3841 cgcatttccg gcactgacgc gacgggacaa gcgatgaacg gcgccggact gccgacgcgc
     3901 gcggggcaga tcgtcgcgag ctacgccatc acgagccact tcgacatcaa gcgcgattac
     3961 aacccgcaga ccggcgagcc gctcaacgtc gtggtcgaaa actcgaccga caagccctgg
     4021 tacgcgcgag agttcatgcg cgtcgactgg tcgaagaatc tcatcacgga cgcgtacgac
     4081 tacgacacgc tcgcacagac cgggatctac ggcggtgtcg actacgaacc cacgagctac
     4141 accgtgctcg atccgtccga tcccgacgcg cccatgttcg cccccgacga aggttacttc
     4201 gacgtgacga acaaggtgta cgcgacgccg cagagcgtcg acgtgtcgag cctcggcatc
     4261 ggactcgaca cgatgcccgc ctgctggctc ggcggggagt ttcacggcgg caccgcgccc
     4321 tcgggcaact gcaacccggt gcagctcacg atccgcgagt cgttccgcaa gatcaccgat
     4381 cacgactacg agccgaccga cgaggacggt tatcgcttcc agacgctcgg cgcgttcaac
     4441 gtcgaacggc agggttacga ccggagctac ggacagatcg acaccaattg gcaccgtttc
     4501 atctcgcgct acaacatctg gcagcgcagc catttttacg ccaatcccga gcgcatgacc
     4561 gggcccgtcg cgtgcgcgac caaggagacg accgaggatc cgacgggcga tcccaacgcg
     4621 gatcccaacc gcgatctcga cggcgacggc acggccgacg agtgccaagc cgccggcccg
     4681 ggctcccgct gcgacatctt ctcgcacaag tgcacgctgc cgttcagcca acgcaagacg
     4741 gtcaccgtcc cctggtacct cgccggggac gcgagctact tcgatccgac ggactggggc
     4801 gtcgaggaat gggatctcgc gctcaagacg gccgtgcaaa cggcgcgcct caccgagtgc
     4861 cggcgcgcgg gcggagggaa ctgcgacgcc gattacccga tgtggcgcgg ccaacaagac
     4921 gacaacgaag aagccgtcgc gatttcacgt gagttcgacg cctgtcagcg cgctcgcggc
     4981 tggggcgaaa agagctgcac cgatgacgtg cgcgccgccg cgcgggcgct cgccgccgcg
     5041 cgcggcaacg ccgacgaccc gagcacgctc gccatcggcg agatcgtcag catgccgccc
     5101 gtcctcacgc tctgccacga tcccgtgcaa acgagtgatc acccggcctg cggcccgcgc
     5161 ggtctcgcgc cacgcctcgg cgacatccgc taccacatcg tcgacgccat cgagaacccg
     5221 cagaccccga gcccctgggg catcatggtc gacgccgacg acccgctcac gggcgaaaaa
     5281 gtcgcgggct cgatgaacat ctggacgtac gtgacggaca cggcggccca gacgctcgtc
     5341 gatctcgtgc gctacgcaaa cggcgagctt tcgacggcgg cgatcacgaa cggtcagtac
     5401 gtcgagaact acgccggggc cgtcaagctc gcgggcgccg gcggcttgcc gacgctcacg
     5461 agcgcgcaga tcaacgagcg actcgcggcg gcgaccaagc tcgacgcgaa gtcgttcgcc
     5521 gcgatggcga agacgccacc gagcgacgac gtgcagcggc tgctgaacgc cgccaaggcg
     5581 cgcgtgctcg acgtggccgc gagctcgcag gtggcttcac ccgccctggc gcgtgctgcc
     5641 acgacgctcg gctccgcacg cggaacgccg ctcgaatcgg cgctgttgaa cgcgccgatg
     5701 cttcagctgg tcggcctcgg cggcaacgtg ccggccggcg gcagtctcat gaacgtcgtc
     5761 tcaccgctcg cgctcaataa ccccatgatg cgcgcgcgcc tctcggagat gcgcgaaaat
     5821 gcgctcgccg agcgcggcgc gtgcatcgtg agcgaagcgc ccgagccctc gtcgctgtcg
     5881 ggcctggcgg acatcatggc ccgcaagttc ccgcgcgggg acaacgagac cgccgcaggc
     5941 acgaaggacc gtaaccagcg catgctcgac tacgtcaagc gccgctatca ctacggcgtg
     6001 ctggcccacg agatgggtca ctcgattggc ctccgccaca acttcgtgag cagcgcggcg
     6061 ccgctcttct accggccgca gtactggcag ctccggacga agaacggcag cgtctcgacc
     6121 gcgtgtaaag acgcggtcac ggacggctcg acgtgcgtcg gtccgcgcta cttcgacccg
     6181 gtgacggacg aagagcagtc gcagctcatc tggatgttca tgcagtccac ggtgatggac
     6241 tacccgggcg aggtcgctca ggacatgctc ggcctcggcg tgacggattt tgccgccgca
     6301 cgcttcttct acggcgacac gagctccgtc tacacggact cgcattacct cgccggcacg
     6361 gccgtcggca ccggcatttc ggctgcaacc gacacgttcg gcgggctcat cggcatccgc
     6421 tacggcgtgc gcgcgggggg cctcggggcg aacggcgtga acgagttcca ctactcggcg
     6481 ctacagaaga gctacgggct gattcacgac tgctacgacg tgtcgcccga gccgccggcg
     6541 agctggaacg aagccgtcga cggcgtgtgg gatccggtgc tcgacgggca cacggtctcg
     6601 atcgacgggc agccgaccaa gtgccgcgag caacaggtcg actacgtgcc ttactcgaat
     6661 ctgcgcatgc cgagcacgtc cgagctcaac ggcgcatatt atcgcggcgg accgagcgtc
     6721 gac
//
LOCUS       DATIML010000102         2146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2331504, whole genome shotgun sequence.
ACCESSION   DATIML010000102 DATIML010000000
VERSION     DATIML010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2331504"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..1402
                     /locus_tag="VLJ38_01715"
     CDS             179..1402
                     /locus_tag="VLJ38_01715"
                     /inference="COORDINATES: protein motif:HMM:NF014680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HSU38243.1"
                     /translation="MLTLLIGLAVGAAVAWAVMRSGARVAGAENDGLRRELEHERRSA
                     HEKLEIVERASAEWERRFEALSARALKSNNQSFLELAQAQFAPLAKTLEAFRGQAEEL
                     ERARQQAYGALLSQVQSLSVSQEKLRTETGNLVTALRTPNVRGRWGEIQLKRVVELAG
                     MVEHCDFVEQRSERDADGRLLRPDLIVKLPGRKNVVVDSKVPLEAYLDAMRTDIDEET
                     RKAHLARHARLVRDHMNALGAKKYWQQFAPAPDFVVMFMPDESFFRCALEADPSLIEA
                     GVDAGVLPASPTTLITLLRTVAHTWQQETIAESARKVCDLGRELYERVGTFAKHFAKV
                     GRNLDTAVGAYNEAVGSLEARVLVTARKLEEHGASSGDLPAVQPLDRTSRPLVTAELA
                     VENVLELPGAAADAA"
     gene            complement(1407..>2146)
                     /locus_tag="VLJ38_01720"
     CDS             complement(1407..>2146)
                     /locus_tag="VLJ38_01720"
                     /inference="COORDINATES: protein motif:HMM:NF037526.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Vms1/Ankzf1 family peptidyl-tRNA hydrolase"
                     /protein_id="HSU38244.1"
                     /translation="SGAVVAVVGREKGVLLRLRDGRLEELADLSEEQPGRHDQGGWSQ
                     ARFQRHIDELADKHLRTVADELDTHVRTGVARQIVVVCPEETRGEFEDMLSHEARKAV
                     VGWAQGEQYASPSDLLAIAEPWFERARMTHETQQLERWQEEAGRNGRAASGWQQTLEA
                     ASDGRVDLLLFQEGAARTAYQCPRCGRASVDDGACPLDGTAMEERADAADVAIHQTLA
                     HGGTALALDRERPELGRVEGVAAILRF"
BASE COUNT          345 a          738 c          758 g          305 t
ORIGIN      
        1 catcaagagc tcgaagggca ggccgcggac agcgcggcga aacacgagga gctcgcgtcc
       61 gaggagcgca cacgggctgc ggagcatcgg gcacagcgcg aaaccgaata gctcggcgcg
      121 tcgacggacc tgcgggctcc gtccgacgcc gcctttaccg tgagtcggct caatggtcgt
      181 gctcactctt ctcatcggcc tggccgtcgg cgcggcggtt gcgtgggcgg tcatgcgctc
      241 cggagcgcgt gtggccggag ccgagaacga cgggctccgc cgcgagctcg agcatgagcg
      301 gcgcagcgcg cacgagaagc tcgagatcgt ggagcgcgct agcgccgaat gggagcggcg
      361 cttcgaagcg ctcagcgcac gcgccctgaa gagcaacaat cagtcgttcc tggagctcgc
      421 gcaggcgcag ttcgcgccgc tggcgaagac gctggaggcg ttccgcggac aggcggaaga
      481 gctcgagcgg gcgcggcagc aggcctacgg cgcgctcctg agccaggttc agtcgctgtc
      541 ggtgagccag gagaagctgc gaaccgagac ggggaatctc gtaacggcgc tgcgcacgcc
      601 gaacgtgcgg ggccggtggg gggagatcca gctgaagcgc gtcgtcgaac ttgcagggat
      661 ggtcgagcac tgcgacttcg tcgagcagcg ctcggagcgc gacgcagacg gccggctcct
      721 ccggcccgac ctgatagtga agctgcccgg aaggaagaac gtcgtcgtcg actcgaaggt
      781 cccgctcgag gcgtacctcg acgcgatgcg cacggacatc gacgaagaga cgcggaaggc
      841 gcacctcgcg cgccacgcgc ggctcgtgcg cgaccacatg aatgcgctcg gggcgaagaa
      901 gtactggcag cagttcgcgc cggcacccga cttcgtcgtg atgttcatgc ccgacgagtc
      961 gttcttccgt tgcgcgctcg aagcagaccc gtcgctgatc gaagcgggtg tcgacgccgg
     1021 ggtgctgccg gcgtcgccga cgacgctgat tacgctgctg cgcacggtcg cgcacacatg
     1081 gcagcaggag acgatcgccg agagcgcgcg caaggtctgc gatctcggac gggagctcta
     1141 cgagcgcgtc ggcacgttcg cgaagcactt cgcgaaagtc ggccggaatc tcgatacggc
     1201 ggtcggcgcg tacaacgaag cggtcggctc gctcgaggcg cgcgtgctcg tgactgcgcg
     1261 caagctcgag gagcacggcg cgtcgagcgg cgaccttccc gccgtgcaac cgctcgacag
     1321 gacctctcgc ccgctcgtta ccgccgagct ggcggtggag aacgtcctcg agttgcccgg
     1381 cgccgcggcc gacgccgcgt agcgcgtcag aaacgaagaa ttgcggcgac gccctcgacg
     1441 cggcctagct cgggccgctc gcggtcgagc gcgagcgcgg tcccgccgtg cgcaagcgtt
     1501 tggtgaatcg caacgtctgc ggcgtcggcc cgctcctcca tcgccgtgcc gtcgagcggg
     1561 catgcaccgt cgtccacgga cgcacgcccg cagcgggggc actggtacgc agtgcgtgcg
     1621 gcgccctcct ggaagagcaa gaggtcgacg cgtccgtcgg acgcggcctc gagcgtctgc
     1681 tgccagcctg aagcggcacg cccgttccgg ccggcctctt cctgccagcg ttcgagctgc
     1741 tgcgtctcgt gcgtcatccg tgcgcgctcg aaccacggct ccgcgatcgc gagcagatcc
     1801 gagggtgacg cgtactgctc gccctgcgcc cacccgacga ccgccttccg cgcctcgtgc
     1861 gagagcatgt cctcgaactc gccgcgcgtc tcctcgggac aaacaacgac aatctgccgc
     1921 gcgacgccgg tgcgcacgtg cgtgtcgagc tcgtcggcaa ccgtccgcag atgcttgtcc
     1981 gcgagctcgt cgatgtgtcg ctggaagcgc gcctgagacc agccgccctg atcgtgccgc
     2041 cccggctgct cctcgctgag atcggcgagc tcctcgaggc ggccgtcgcg cagccgcagc
     2101 agcacacctt tttcgcgccc gacaaccgcg acgacagctc cgctgc
//
LOCUS       DATIML010000103         2983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3775755, whole genome shotgun sequence.
ACCESSION   DATIML010000103 DATIML010000000
VERSION     DATIML010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3775755"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /locus_tag="VLJ38_01725"
     CDS             complement(<1..538)
                     /locus_tag="VLJ38_01725"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU38245.1"
                     /translation="MSLYVTLRIALRALSRNRLRSFLTTLGVIIGVAAVITMTAIGEG
                     AKARIQAAFASMGTNMLVISPGSTTLGGVKGGSGTMPSLTWDDLKAIQRDVPSVRAAA
                     AVLRSSASIVSETNNWSTSIQGTAPEYFDVRNWPMSSGSAITQSDVDTGAKVIVLGQT
                     VVDQLFGPNADPVGQTVRI"
     gene            complement(535..1260)
                     /locus_tag="VLJ38_01730"
     CDS             complement(535..1260)
                     /locus_tag="VLJ38_01730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38246.1"
                     /translation="MALIELEEIYKIYNAGSDAEVRALAGVSLSIAPGEFVAVMGPSG
                     SGKSTLMNVLGCLDRPTSGRYLLDGKDVSRIGKNELAEVRNRTLGFVFQNFNLLPRMS
                     ALENVELPLVYAGVPARERKNRSTEALELVGLAKRQDHHPNQLSGGQQQRVAIARALV
                     GRPKIIFADEPTGNLDSHTSTEVMAMLQALAPTGITVALVTHEPDIAEYASRVIVVKD
                     GLIVKDEQREAKRAVVETSEEHA"
     gene            complement(1476..2912)
                     /locus_tag="VLJ38_01735"
     CDS             complement(1476..2912)
                     /locus_tag="VLJ38_01735"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU38247.1"
                     /translation="MKKWLFPLLVLLAVGGAVGYYFYARAHRPPEVLYKTAPVERRSI
                     SSRVTASGTLQARVTVQVGSQVSGRVLALYAYFNSKVKKGDIVAKLDPQLLQAALEQA
                     RANYASAQANAAKAEATRVDAERQYERAKTQKAEGLASQQDVDTAQTAAAVARAGVDA
                     AKANVEQARAALNQDQVNVSLTVIKSPIDGIVISRSVDVGQTVAASLQAPVLFTIAED
                     LTKMHIEASVPESDVGKLAVDMPVAFTVDAFPGQRFRGTIEQVRNAAVTVQNVVTYTA
                     IVAVDNPELKLRPGMTATVTIVTARRNDALAVPNAALRFKPPGATAASSGRGAGRPNG
                     SASASGSAWPGGSGHGRNGRSPGAASANASSAAPAGSNAPVASGGPKASGAPASSADA
                     SFTGAADDTSQKTAYLLKGNTAVPVKLTVGITDGSFTEIIDGPLKEGDGVIVEGPPSD
                     GSASSPPTGQGQGQRGASGGAPRMRGVF"
BASE COUNT          421 a          952 c         1067 g          543 t
ORIGIN      
        1 gaatgcgcac ggtttggccc acgggatcgg cattcgggcc gaacagctga tcgacgacgg
       61 tctggccgag cacgatgact ttggcgcccg tgtcgacgtc gctttgcgtg atggcggagc
      121 cgctcgacat gggccagttg cgcacgtcga agtactcggg cgccgtgccc tggatgctcg
      181 tggaccagtt gttggtttcg ctgacgatcg aggcgctcga acgcagcacg gccgcggcgg
      241 cgcgcacgga cggcacgtcg cgctggatgg ccttgagatc gtcccaggtg aggctcggca
      301 tcgtgcccga ccctcccttg acgccgccga gcgtggtcga gcccggcgag atcacgagca
      361 tgttcgtgcc catcgaggcg aacgccgcct ggatgcgcgc cttggcgcct tcgccgatgg
      421 cggtcatcgt gatgacggcg gcgacgccga tgatgacgcc gagcgtcgtg aggaagctcc
      481 gcagccgatt gcgcgagagc gcgcggagcg cgatgcgcag cgtaacgtag aggctcacgc
      541 gtgctcctcg ctcgtctcga cgacggcgcg ctttgcttcg cgctgctcgt ccttcacgat
      601 gagcccgtct ttgacgacga tgacgcgcga agcgtactcg gcgatgtccg gctcgtgcgt
      661 gacgagcgcg accgtgatgc cggtcggtgc gagcgcttgc agcatggcca tgacttcggt
      721 gctggtgtgg gaatcgaggt tgccggtggg ctcgtcggcg aagatgattt tgggacgccc
      781 gacgagcgcg cgcgcgatgg cgacgcgctg ctgctgaccg cccgagagct gattgggatg
      841 gtgatcctgg cgtttggcga ggccgacgag ctcgagggct tcggtcgagc ggttcttgcg
      901 ttcgcgcgcg ggcacgccgg cgtagaccag cggcagctcc acgttttcga gcgcgctcat
      961 gcgcggcaag aggttgaagt tttggaacac gaagccgagc gtgcggttgc ggacttcggc
     1021 gagctcgttt ttaccgatgc gcgagacgtc cttgccgtcg agcaggtagc gtccggaggt
     1081 cggtcgatcg aggcagccga gcacgttcat gagcgtcgat ttgcccgagc cgctcggccc
     1141 catgacggcg acgaactcac cgggtgcgat cgagagcgag acaccggcga gcgcgcgcac
     1201 ctcggcgtcg gagccggcgt tgtagatttt gtaaatctct tcgagctcga tcagcgccat
     1261 ttcaaactcg gctttcgccg tcttgcgagc ggcggcatcg cgccgcggcc gtggtcgcgc
     1321 aagtttccgc gcttctgtag cggaagcgct tcgacgagga cctcgcgacc aaggcgtgca
     1381 tcgaagcaac cggcgccggc ctcgccggta tttttcgtgg cttctcgcgt ctcatgccga
     1441 tcgtgatctt tccttccaag acgggcaaac tcgactcaaa atactccgcg catgcgcgga
     1501 gcgccgccgc ttgcgccgcg ctggccttgg ccttgacctg tgggcgggct cgaagcggag
     1561 ccgtcggagg gcggcccttc gacgatgacg ccgtcgccct ctttgagtgg accgtcgatg
     1621 atttcggtga agctgccgtc ggtgatgccg accgtgagct tcacgggcac cgcggtgttg
     1681 cccttgagca ggtacgccgt tttttgggag gtgtcgtcgg ctgcgcccgt aaaggaagcg
     1741 tccgctgagg acgcgggcgc gccgctcgct ttcgggccgc cgctcgcgac cggagcgttc
     1801 gagccggcgg gcgcggcgct cgacgcgttg gcgctcgccg cgcccgggga gcgtccgttc
     1861 cgtccatgcc cgctgccgcc cggccaggca ctgccgctcg ccgatgcgct gccgttcggc
     1921 cgccccgcgc cgcgtcccga gctcgccgcg gtcgcgccgg gcggcttgaa acggagcgcg
     1981 gcattcggca cggcgagcgc gtcgttgcgc cgcgccgtca cgatcgtcac ggtcgccgtc
     2041 atgccgggcc ggagcttcag ctcggggtta tcgacggcga cgatggccgt gtaggtgacg
     2101 acgttctgca cggtgacggc cgcgttccgc acctgctcga tcgtgccgcg aaagcgctgc
     2161 cccggaaacg cgtcgaccgt gaacgcgacg ggcatatcga ccgcgagctt gccgacgtcg
     2221 ctttcgggca cgctcgcctc gatatgcatc ttggtgagat cttcggcgat cgtgaagagc
     2281 accggcgcct ggagcgaggc cgcgaccgtc tgccccacgt ccacgctgcg cgaaatcacg
     2341 atgccgtcga tgggcgactt gatcacggtg agcgagacgt tcacctggtc ttggttgagc
     2401 gcggcgcggg cctgctcgac gttggccttg gcggcgtcga cgccggcgcg cgcaacggcg
     2461 gcggccgttt gggccgtgtc gacgtcttgc tgcgaggcga gcccctcggc tttctgcgtc
     2521 ttggcgcgct cgtattgacg ctcggcgtcg acgcgcgtcg cttcggcttt ggcggcgttc
     2581 gcttgcgcgg aagcgtagtt cgcgcgcgcc tgctccaggg ccgcttgaag gagctgcggg
     2641 tcgagcttgg cgacgatatc gccctttttc accttggaat tgaagtaggc gtagagcgcg
     2701 aggacacggc ccgagacttg gctgccgacc tgcaccgtga cgcgcgcctg cagcgtgccc
     2761 gacgcggtca cgcgcgagct gatgctacgc cgctcgacgg gggccgtctt gtacaggact
     2821 tcgggcgggc gatgcgcgcg cgcgtagaag tagtaaccga ccgcgccgcc gacggccagc
     2881 agcacgagta gcggaaagag ccactttttc atggagacac cgaacaattg gcgagcgtca
     2941 gcaagtcgtt gatgcgcgct tgcaccaggg cgagctcttg gag
//
LOCUS       DATIML010000104         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2621005, whole genome shotgun sequence.
ACCESSION   DATIML010000104 DATIML010000000
VERSION     DATIML010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2621005"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1626
                     /locus_tag="VLJ38_01740"
     CDS             <1..>1626
                     /locus_tag="VLJ38_01740"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38248.1"
                     /translation="DAHYLLGFVLGDMGRHDEAQKATKRAIQLNPALSRAHANLSLDR
                     STPQTYEAVVAQRAARALDREMAVAPEGQLAHYNLGLAFRQKGYYAEALREYQLAADR
                     GEDAELVLQAMAELHLLKKEPAIAAQLYDKLLASRPDSPKLWNERGIALHQDGRYADA
                     AESYRRSVACDPKYALGLNNLGVALYHIGNAEASVEAFRFALKAHPSFVKARLNLALL
                     LFKKKRLPLCLEAYRQVLQLEPEQPMAWNGVGLVLVELKKLEDARNAYGRAIQARPNY
                     AEAHYNLSFVLSNLGDFEGALKATKRALEIDPYYVQQKFELAIDLEFEDPEFAIVPDL
                     GGEKRTDGSVEEFAFDTGVLDSLFTELAPVAPTPVPPTPAGTPYSAAADYLSKGLLDR
                     ASAEASRVLARGGEAVEGLTLLGDVYVKQGAFGEALERYRGARAAATDTAGGSSSAAR
                     RATAGEVRVLIMLGRGAEARPLAEELLSAAPTDVEMLILAATARADGGDPAAALEALE
                     RARRGAPARADVLKQIGDVARSIGDFESAVEAY"
BASE COUNT          270 a          547 c          567 g          242 t
ORIGIN      
        1 ccgacgcgca ctacctgcta ggattcgtgc tcggcgacat gggccggcac gacgaggcgc
       61 agaaagcgac gaagcgcgcg atccagctga acccggcgct ctcgcgcgcg cacgcgaacc
      121 tatcgctcga tcgcagcacg ccgcagacgt acgaggccgt cgtggcgcag cgtgcggcgc
      181 gcgcgctcga ccgcgagatg gccgttgcgc ccgaggggca gctcgcgcac tacaacctcg
      241 ggctcgcgtt tcggcagaag ggctactacg cggaggcgct ccgtgagtat caactcgccg
      301 cggaccgcgg cgaggacgcc gagctcgttc tgcaggcgat ggcggaattg cacctgctca
      361 agaaagagcc ggccatcgcg gcgcagctct acgacaagct gctcgcatcc cgcccggata
      421 gcccgaagct gtggaacgag cgcgggatcg cgctccatca ggacggacgc tacgccgacg
      481 ccgcggagag ctatcgccgc agcgtcgcat gcgaccccaa gtacgcgtta ggtctcaaca
      541 acctcggcgt cgcgctctac cacatcggga acgccgaagc gtccgtcgag gcattccggt
      601 ttgcgctgaa ggcacacccg tcgttcgtca aagcgcgcct caacctcgcg ctgctgctct
      661 tcaagaagaa gcgattgccg ctctgcctcg aggcgtatcg ccaggtgctt caactggagc
      721 ccgagcagcc gatggcgtgg aacggcgttg gcctcgtgct ggtggagctc aagaagctcg
      781 aggacgcccg caacgcgtat ggccgcgcca tccaggcgcg ccccaactat gcggaggcgc
      841 actacaacct cagcttcgtg ctgtcgaacc ttggcgattt cgagggtgcg ctcaaggcga
      901 cgaagcgcgc gctggagatc gatccgtact acgtgcagca gaagttcgag ctcgcgatcg
      961 acctcgagtt cgaggatccc gagttcgcga tcgtccccga cctggggggt gagaagcgca
     1021 ccgacggatc ggtcgaggag ttcgcgttcg ataccggtgt gctcgactcg ctgttcaccg
     1081 agctggcgcc ggtcgccccg acgcccgtcc cgccgacgcc tgccggcacg ccctactcgg
     1141 ccgcggccga ctacctctcg aaaggcctgc tcgaccgggc gtccgccgaa gcgagccgag
     1201 tgctcgcgcg cggcggcgag gcggtggaag ggctgacgtt gttaggcgac gtgtacgtga
     1261 agcagggcgc gttcggcgaa gcgctcgagc ggtatcgcgg cgcgcgcgcg gcagcgacgg
     1321 acacggcggg tggctcgtcg tcggcggccc gccgcgcgac ggccggagaa gtgcgcgtat
     1381 tgatcatgct cggtcgtggc gccgaagcgc gcccactggc cgaggagctc ctgagtgccg
     1441 ccccgacgga tgtggagatg ttgatcctcg ccgcgactgc gcgggccgac ggtggtgatc
     1501 ctgccgcggc gctcgaggca ctcgaacgcg cccgtcgcgg tgctccggcg cgcgcagacg
     1561 tcctcaagca gatcggtgac gtcgcgcgct cgatcgggga cttcgagagt gcggtggaag
     1621 cctatc
//
LOCUS       DATIML010000105         3064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2621423, whole genome shotgun sequence.
ACCESSION   DATIML010000105 DATIML010000000
VERSION     DATIML010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2621423"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1883
                     /gene="mutL"
                     /locus_tag="VLJ38_01745"
     CDS             <1..1883
                     /gene="mutL"
                     /locus_tag="VLJ38_01745"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HSU38249.1"
                     /translation="VDAGATRCDVEIEGGGIMAISVADDGEGMSAEDAERALERHATS
                     KLTCFEDLERLTSYGFRGEALPSIASVSRLTLRTRARDAEIGVEVSCEPGAARVTRPT
                     GHAPGTRIEVHELFFNVPARRKFLRSSGTESGHVTEVVEAAALARPDLTFTLARDGRR
                     VREYLRAKDREERVRGVCAEDELAACRGERGPLRVEAFLSRPEAARAGASGLRLLVNG
                     RPVRDRAILVAVAQAYGSVLERGRYPRGVVYLDLPNELVDVNVHPQKQEVRFADSRAV
                     SDAVYATLSRALATAFSWPTPDRSAWGRRAPERNAPSGEQAARNGGYAPSGAGHAPSG
                     AGYSPSGSGNTPSGAGYAPSAAYGAGARRYAPHDASTPHEDAVSVAGAVAPIPFSDDD
                     SEASPPTLSIPLQPGPSFVEEARAVIAVRDSATSPIQPSPNVRWSMLRFVAQLRQTYL
                     LCEGDEGIYLLDQHAAAERVTFTRLRREYQSRAVPSQALLFPAVIDVTPAEAEIVEQC
                     GAEIAEVGLEVRVRSAESVSIHAVPRLLQRASAERLLRDLLSEVSRGGGRAFSAAVDL
                     ALATMACHGSVRAGDPLTASEAKALLVALDQADFAGHCPHGRPIVTVQSWAELERKVG
                     RR"
     gene            1886..2779
                     /gene="miaA"
                     /locus_tag="VLJ38_01750"
     CDS             1886..2779
                     /gene="miaA"
                     /locus_tag="VLJ38_01750"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HSU38250.1"
                     /translation="MTSDSEVLPLTVVVGPTASGKTALAVRLAEERGGEIVSADSVQI
                     YRRFDIGSGKPSAEERARVVHHLVDLLDPNEPIDAAGWATLAARAIDDIRARGREPIV
                     CGGTFLWVRALLFGLAGAPPADAVIRARHRARAESEGRPALHAELAQVDPESAARLAP
                     NDLVRVSRALEVHELTGVPLSRWQAEHGFRTPRYVARLVGVRRDRDELDRRIEARVQA
                     MLAAGWIDEVRALNAAGYGSSRAMGAVGYKQVSLALANGAPIDLSALALSIVRATRIF
                     ARRQRTWLRDEPVEWLEPHDA"
BASE COUNT          440 a         1050 c         1105 g          469 t
ORIGIN      
        1 ccgtcgatgc cggcgccacg cgttgcgacg tcgagatcga gggcggcggc atcatggcga
       61 tttcggtcgc cgacgacggc gaaggcatga gcgcggagga tgccgaacga gcgctcgagc
      121 ggcacgcgac gagcaagctc acgtgcttcg aggacctcga gcgactcacg agctacggct
      181 ttcgcggcga ggcattgccg agcatcgcgt cggtgagccg gctgacgttg cgcacgcgcg
      241 cgcgcgacgc ggaaattgga gtcgaggttt cgtgcgagcc gggcgcggcg cgtgtgacgc
      301 gaccgaccgg gcatgcgccg gggacgcgca tcgaggtgca cgagttgttc ttcaacgtgc
      361 cggcgcggcg caaattcttg cgctcgagcg ggaccgagtc ggggcacgtg acggaagtcg
      421 tcgaagcggc ggcgctcgcg cggccggatt tgacgttcac gcttgctcgt gacgggcggc
      481 gcgtgcgcga gtatttgcgc gcgaaagacc gcgaagagcg cgtgcgcggc gtgtgcgccg
      541 aggacgagct cgcggcgtgt cggggtgagc gcgggccgct gcgggtcgaa gcgtttcttt
      601 cacggccgga ggcggcgcgc gcgggcgcga gcggcctgcg gctgctcgtc aacgggcggc
      661 ccgtgcgcga tcgcgcgatt ttggtcgcgg tcgcgcaagc gtacggcagc gtgctcgagc
      721 gcgggcgcta tccgcgcggc gtcgtctacc tcgacttgcc gaatgagctc gtggacgtga
      781 acgtgcaccc gcagaagcaa gaggtgcgct tcgcggattc gcgcgcggtg agcgacgccg
      841 tttacgcgac cttgagccgc gcgctggcga cggcattttc gtggccgacg cccgaccgtt
      901 ccgcgtgggg acggcgcgcg ccggagcgga acgcgccgag cggggagcag gcggcgcgga
      961 acggtgggta cgcgccgagc ggtgcggggc acgcgccgag cggtgccggg tactcgccga
     1021 gcggcagcgg gaacacgccg agcggtgccg gatacgcgcc gagcgccgcg tacggcgcgg
     1081 gcgctcgtcg ctacgcgccg cacgacgcct cgaccccgca cgaagacgcg gtgtcggtag
     1141 caggcgccgt cgctccgatt ccgttcagcg acgacgactc cgaagcatcg ccccccacgc
     1201 tctcgatccc gctgcagccc ggcccttctt tcgtcgaaga agcgcgcgct gtcatcgccg
     1261 tccgcgactc ggccacctca cccatccaac caagcccgaa cgtccgctgg tcgatgttgc
     1321 gcttcgtagc gcaactccgg caaacgtacc tgctttgtga aggcgacgaa ggcatctacc
     1381 tgctcgacca gcacgccgcg gccgagcgcg tcaccttcac gcgcctgcgt cgcgaatatc
     1441 aatcgcgagc ggtgccgtca caggcgttgc tattcccggc agtcatcgac gtgacgcctg
     1501 cggaagccga aatcgtcgag cagtgcggcg ccgagatcgc ggaggtcggg ctcgaggtgc
     1561 gcgtgcgcag cgccgagagc gtcagcattc acgccgtccc gcggctcctg cagcgagcga
     1621 gcgccgaacg cctcctgcgc gatctcttga gtgaagtgtc gcgcggcggc ggtcgcgcgt
     1681 tttcggcggc ggtcgacctc gcgcttgcca cgatggcgtg ccacggatcg gtgcgagcgg
     1741 gtgatccgct cacggcgagc gaggccaagg cgttgctcgt cgcgctcgat caggctgatt
     1801 ttgccggtca ttgtccgcac ggtcgcccca tcgtcacggt tcagtcctgg gccgagctcg
     1861 agcgcaaagt cggacggcgt tagccgtgac gagcgacagc gaggtgttgc cgctcactgt
     1921 tgtcgtggga cccacggcct caggtaaaac cgcgctcgcc gtgcggctcg ctgaagagcg
     1981 cggtggggaa atcgtgagcg ccgatagcgt gcaaatctat cgccgtttcg atatcggcag
     2041 tggcaagccg agcgccgagg aacgcgcccg cgtcgtccac cacctggtcg acctgctcga
     2101 cccgaacgag cccatcgacg ccgccggctg ggccacgctc gccgcccgcg ccatcgacga
     2161 catccgcgcc cgcggccgcg agcccatcgt ctgcggcggc acattcctct gggtccgcgc
     2221 cttactcttc gggctcgcgg gcgctccccc cgcggacgct gtcatccgcg cgcgccaccg
     2281 cgctcgagcc gaaagcgaag gacgtcccgc gctccacgcc gagctcgcgc aggtcgaccc
     2341 cgaaagcgcc gcgcgtctcg cgccgaacga cctggtgcgc gtcagccgtg cgctcgaagt
     2401 ccacgagctc acgggcgttc cgctcagccg ctggcaagcc gagcacggct tccgtacgcc
     2461 ccgctacgtc gcgcgtctcg tcggcgtgcg gcgggaccgc gacgaactcg atcgccgcat
     2521 cgaagcgcgt gtccaagcca tgctcgccgc cggctggatc gacgaagtgc gtgccctgaa
     2581 tgcggccggc tacggctcga gtcgcgccat gggcgccgtc ggttacaagc aggtcagtct
     2641 cgcgctcgcg aacggtgcgc cgatcgactt gtccgcgctc gccctgtcca tcgtgcgggc
     2701 gacgcgcatt ttcgcgcgcc ggcagcgcac ttggctgcgc gacgagcccg tagaatggct
     2761 cgagccgcac gacgcgtgac ggcgccgtgc ggctcggact cgcaaacggt gtgtgcgggg
     2821 cgttcgtgcc gagttgcacg ataccgagcc gccttcggct cgagccgtac gacgcgtaac
     2881 ggctcgcacg gctcgagcgc gagctcgcgt cagacgttcg cgatgaccgc gaggttgccc
     2941 tgggcttcgg agttcagaat gttgtcgaca gccgagaggg ttcggtcgct cgcctgctcc
     3001 gtgcgttgcc gatggtgctc ggcttcttcg gcgcgggaac gcgcgtcggc gacgtgcgcc
     3061 tcag
//
LOCUS       DATIML010000106         1943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3199042, whole genome shotgun sequence.
ACCESSION   DATIML010000106 DATIML010000000
VERSION     DATIML010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3199042"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VLJ38_01755"
     CDS             <1..426
                     /locus_tag="VLJ38_01755"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU38251.1"
                     /translation="DKCPNEPETKNGFEDTDGCPDKIPDAVKKFSGVVQGIYFKKGSA
                     VVRADSKTTLNAAVKVLQQYPSIGFEISGHTSSEGDKAVNDKLSLDRADAVKQYLVDQ
                     GVEASRIKTRGAGAEEPIADNNTKAGREKNRRIEFKVLQ"
     gene            complement(487..1143)
                     /locus_tag="VLJ38_01760"
     CDS             complement(487..1143)
                     /locus_tag="VLJ38_01760"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU38252.1"
                     /translation="MTDSPKHPRIRVGIVDDHPSLRLGVRAMLETDPAIELAGEASDA
                     ASAFELVDKLPLDVLVLDIKLPGKNGIRVARELRTLRPDLKIVMFSAYDKPQYIQNAQ
                     RAGAHAYLVKTDPNLISTLHAVAAGFRRFPDQASLGPAPWDVLTESQLAVAILVASGM
                     SDKEIAERRNISRRTVEKHRQDVRERLRQQTPPVNADPIPLARWLSDWGELDDGAVGA
                     "
     gene            complement(1140..>1943)
                     /locus_tag="VLJ38_01765"
     CDS             complement(1140..>1943)
                     /locus_tag="VLJ38_01765"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HSU38253.1"
                     /translation="DDMERATRSARESSEASVSSTLRQFAVVALAALMAVFLGGLGLT
                     VTEQRLADRKLRALTDRIVHLQEDERARVARDLHDGIVQVLIAARFFIEAGRQKFARD
                     PTAADALLVKSVEQLDGAVADVRRIAHGLRPPTLDDLGLASALRELADEASARLGIPV
                     RFEDGLASAAPGGPQAVALLRVAQEALVNVERHARAGQVRMTLASAGRGRRVVLQVED
                     DGRGFDPRASHAGSGLGNMRHRVEELGGDFRIVSRPGRTELSAELEVTS"
BASE COUNT          330 a          639 c          684 g          290 t
ORIGIN      
        1 gacaagtgcc cgaacgagcc ggagaccaag aacggcttcg aggacaccga cggctgcccc
       61 gacaagatcc cggacgcggt caaaaagttc tccggcgtcg tccagggcat ctacttcaag
      121 aagggcagcg ccgtcgtccg cgcggattcg aagacgacgc tcaacgccgc cgtgaaggtg
      181 ctccagcagt atccgagcat cggcttcgaa atttcgggac acacctcgag cgagggcgat
      241 aaggccgtca acgacaagct gtcgctcgat cgagccgacg ccgtgaagca gtacctcgtc
      301 gaccagggcg tcgaggcgag ccgcatcaag acgcgcggcg ccggggccga agagcccatt
      361 gccgacaaca acacgaaggc cggtcgcgaa aagaaccggc gcatcgagtt caaggtcctg
      421 cagtaacggg aggcctaccc cacgcggcgg cgcgcgactt caagcgccgc cgcatgggta
      481 gcggcctcag gcgccgacgg ctccgtcgtc gagctccccc cagtccgaga gccagcgcgc
      541 gaggggaatg ggatcggcgt tgacgggcgg agtttgctgg cgcaggcgct cgcgcacgtc
      601 ttggcggtgc ttttccacgg tgcggcggct gatgttgcgt cgctccgcga tctctttgtc
      661 gctcatgccg ctcgccacga ggatggcgac ggcgagctga ctctcggtca agacgtccca
      721 gggcgcgggc ccgagcgagg cttgatcggg aaagcgccgg aacccggccg cgacggcatg
      781 cagggtggag atcaggttcg ggtccgtctt cacgaggtag gcgtgagcgc ccgcgcgctg
      841 tgcgttttgg atgtattggg gtttgtcgta cgcgctgaac atcacgattt tgaggtcggg
      901 gcgcagggtg cgaagctcgc gtgcgacgcg gatgccgttc ttgccgggaa gcttgatgtc
      961 gagcacgagc acgtcgagcg ggagcttgtc cacgagctcg aaggcgctcg ctgcgtcgga
     1021 ggcctcaccg gcgagctcga tggcagggtc ggtctcgagc atggcgcgta cgccgaggcg
     1081 gagcgagggg tggtcgtcga cgatgccgac gcgaatcctc ggatgtttag gcgagtcggt
     1141 catgaggtta cctcgagctc ggcgctgagc tcggtgcgac ccggacgcga gacgatccga
     1201 aaatcaccgc cgagctcctc gacgcggtga cgcatgttac caagccctga gcccgcgtga
     1261 ctcgcacgtg ggtcgaagcc acggccgtcg tcctcgacct ggagcacgac gcgccggccg
     1321 cgtccggcgc tggcgagcgt catgcgcacc tgccccgcgc gcgcgtggcg ctcgacgttg
     1381 acgagcgcct cctgagcgac acgcaagagc gctaccgcct gcggtccgcc cggtgcggcg
     1441 ctcgcgagcc cgtcctcgaa gcgcaccggt ataccgaggc gcgcgctcgc ttcgtccgcg
     1501 agctcacgca acgccgaagc aaggcccaaa tcgtcgagcg tcggcgggcg caagccgtgc
     1561 gcgatacggc gcacgtccgc gacggcgccg tcgagttgtt cgaccgattt gacgagcagc
     1621 gcgtcggccg cagtcggatc gcgcgcgaac ttctgccggc cggcttcgat gaaaaagcgg
     1681 gcggcgatca agacctgcac gatgccgtcg tggaggtcgc gcgccacccg ggcgcgctcg
     1741 tcttcctgca ggtgcacgat gcgatcggtg agcgctcgca gcttgcgatc ggcgagccgt
     1801 tgctccgtga ccgtgagtcc gagccccccg aggaaaacgg ccatgagcgc cgcgagcgcc
     1861 acgaccgcaa actggcgcaa ggtgctgctc acgctcgcct ccgaggactc gcgcgccgag
     1921 cgcgtcgccc gctccatgtc gtc
//
LOCUS       DATIML010000107         5688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2043416, whole genome shotgun sequence.
ACCESSION   DATIML010000107 DATIML010000000
VERSION     DATIML010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5688
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2043416"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1450)
                     /locus_tag="VLJ38_01770"
     CDS             complement(<1..1450)
                     /locus_tag="VLJ38_01770"
                     /inference="COORDINATES: protein motif:HMM:TIGR04551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04551 family protein"
                     /protein_id="HSU38254.1"
                     /translation="MIHRSRPSSPVGASRTAPPRTLAAALGLALTAFSANVFAQPPPP
                     AATPAPAPTTPAPPSSAAPAAPAAPAAPAPAPSTTGGGTLPPAPPPAATASAPPGSPT
                     LPLWPEPASDAAALQHQGETRPKPKTLEEVTEKDRVYAEDWWGHARPIFELHGYLRVR
                     AQLEHKFSLGRIDPRAAAMWPRPADDYYVDTSGVTTGPKQCTESESGTGASKSSSTAS
                     DPCHANMQAGANMRFRLNPELHISDNLRVYSQIDLLDNLVLGSTPSGYGNLPSANGGY
                     AVAPRNGYAPMGFFDESEAPPRAGVNSTKNSIEVKRAWAEYSMPVGEIRFGRMPFNWG
                     LGMMFNSGDGYDDDAQSTVDRVQIMSGIKPLDLYFTAAWDFPNEGITSDSLALPNPEP
                     YDLGQLDDVDQYVFSVVRKKTPQLERQSLTRGDFVFNGGFQLVYRHQTVANDRTSNVN
                     SSTTTATTNSALDTAFGSCVSSAQSTQALNCPV"
     gene            complement(1596..2807)
                     /locus_tag="VLJ38_01775"
     CDS             complement(1596..2807)
                     /locus_tag="VLJ38_01775"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38255.1"
                     /translation="MAVCASCRSVVEDVARFCPECGAPLLPAGKRLGAGSELSVEDFG
                     RVVLGHELGEGGMGIVYRGWLYYDPHGRFAGSDPHPVAVKVLHPLLRGRDRAQKMFRR
                     EAEALRRLAHPNVVHFFALTEDQGHLALVMELVYGEPLSSIIARAVAARPSPNAPCMP
                     FLLAWHYFAQLLGALAAVHELGILHRDVKPANVLVRPDGVVKLTDFGIARIPTADMSA
                     TGGLAPGTGAYMSPEAVRGEAQDARSDLYSAAIVLYEMLTGRTPFDRPERSELMVRAA
                     QLDEAAEPVTALVRSAPAVLDVLMARALAKTAALRPSNAIELGEAFRSALDLPETAGW
                     QAQQELAALARTVSGLDLPAVPPTQPDLAPVEPEAPPAPIAPADPAAERAEELRRDVV
                     NAFTTQPIRRQ"
     gene            3172..4659
                     /locus_tag="VLJ38_01780"
     CDS             3172..4659
                     /locus_tag="VLJ38_01780"
                     /inference="COORDINATES: protein motif:HMM:NF014466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thrombospondin type 3 repeat-containing protein"
                     /protein_id="HSU38256.1"
                     /translation="MAVLGYASSATAQDAIGKEFSAQRFDPAPGPRNFFSTRGARTDG
                     EMAWSAGLSVNYANTPLKVESCISETPGSCNQALQTRTLKVIENLVQADVLGSFTPIP
                     RLQIGLRIPVGFAKGNGIDEFAQPKPVSKVGMPDPELEVKARVYGELKDPVVLGVAVY
                     ATAPTGHATAPGAYMGDETPGVGGRAILDGSFGPLAFGVNLGGVFRGEGRMDQAKVGS
                     EMRYSAAVAYQPSPLLRVLVDGFGSTRFTSTAGENALEIDGGAQITPLGSHFTFQAGA
                     GFGALSGFGVPTVRALIGGSYTFEKRDRDNDGIDDAVDQCPTEPEDRDGYEDSDGCPD
                     PDNDLDTIPDAQDKCPSQAEDMDGFEDTDGCPDPDNDKDGIPDVSDRCPNEPETKNGF
                     DDTDGCPDQADRDRDGVPDDKDACPDDAEDTDGFEDTDGCPDPDNDKDGIPDDKDECV
                     DEPENFNKFEDEDGCPDDPKQRTQHPKKEKKAPEQQPEPGKVLEL"
     gene            4698..5210
                     /locus_tag="VLJ38_01785"
     CDS             4698..5210
                     /locus_tag="VLJ38_01785"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSU38257.1"
                     /translation="MVVRAAIVAMLALPLACGGSSGPVNSPENGERVGAQAPDFSLAP
                     VGGGAPVGPAAFVGKVVIVDFWATWCGPCRQSFPAYQRLLGKFDGKLAVIGVSVDDAP
                     DEIAKFKSETGVSFPLVWDQGQMVAASYKPGTMPTAFVIDRAGIVHSIHQGFHAHEET
                     SLEQEIRSLL"
     gene            5347..>5688
                     /locus_tag="VLJ38_01790"
     CDS             5347..>5688
                     /locus_tag="VLJ38_01790"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU38258.1"
                     /translation="MRRIFARVVLPLLLVASNALAVPPSVSELGDRLRSSDDFRVRLQ
                     AALELGKSADPDALAPLVRALDDQNASVRTAAAAALEELGDPSAVPALERHDADRSEQ
                     VRKQVKATLATF"
BASE COUNT          936 a         1855 c         2021 g          876 t
ORIGIN      
        1 ccaccgggca gttgagcgct tgcgtgctct gcgccgacga aacgcacgag ccgaacgcgg
       61 tgtcgagcgc gctgttcgtg gtggcggtgg tcgtagacga gttgacgttc gacgtgcgat
      121 cgttcgcgac cgtttgatgg cggtagacga gctggaagcc gccgttgaag acgaagtcgc
      181 cgcgcgtgag gctctgccgt tcgagctgcg gagtcttttt gcgcacgacg gagaagacgt
      241 actggtcgac gtcgtcgagc tggccgagat cgtagggctc ggggttcggc agcgcgagcg
      301 agtcgctcgt gatgccctcg ttcgggaaat cccaggccgc agtgaagtac aaatcgagcg
      361 gcttgatccc gctcatgatc tgcacgcggt cgaccgtcga ttgggcgtcg tcgtcgtagc
      421 cgtcgcccga gttgaacatc atgccgaggc cccagttgaa cggcatgcgg ccgaagcgga
      481 tctcgcccac cggcatcgag tactcggccc acgcgcgctt cacctcgatg ctgttcttcg
      541 tcgagttcac gccggcgcgc ggcggcgctt ccgactcgtc gaagaagccc atcggtgcgt
      601 agccgttacg cggagcgacc gcgtagccac cgttggcgga cggaaggttt ccgtacccgc
      661 tcggcgtcga gccgagcacg aggttatcga gcagatcgat ttggctgtag acgcgcaggt
      721 tgtcggagat gtgcagctcc gggttcaacc ggaagcgcat gttggcgccc gcctgcatgt
      781 tggcgtggca agggtcactc gcagtggacg agcttttcga tgcgcccgtg ccggactccg
      841 actcggtgca ttgctttggc cccgtggtga cgccggaagt gtcgacgtaa tagtcgtccg
      901 ccggtcgcgg ccacatcgcg gctgcgcgcg gatcgatacg cccgagcgaa aacttgtgct
      961 cgagctgcgc gcgcacgcgc aggtagccgt gaagctcgaa aatcggacgc gcgtgccccc
     1021 accagtcttc ggcgtaaacg cgatccttct ccgtcacctc ctcgagcgtc ttcggcttcg
     1081 ggcgggtttc accttggtgc tggagagccg cggcgtcgct cgccggttcg ggccagagcg
     1141 gcagcgtcgg tgaaccgggc ggcgcgctcg ccgtcgctgc aggcggagga gccgggggca
     1201 gggtgccgcc gcccgtggtg ctgggagcgg gagcaggtgc tgcaggtgct gcaggtgctg
     1261 caggtgctgc agatgaaggt ggagcaggtg tcgtcggcgc aggtgccggg gtcgctgcag
     1321 gcggaggcgg ctgcgcgaag acgttcgcgg agaacgcggt gagcgcgagg ccgagcgccg
     1381 cggcgagcgt gcgtggtgga gcagtcctcg acgctccgac ggggctcgag ggacgtgagc
     1441 ggtggatcat cgagggcgcc aggtgggttt cgtcgagcgt cgggccgggg tggcgcgagg
     1501 cagaggacct ttcgcacgcg gtgccgaaag ctgtcaacga cgctctgagg cggcggattc
     1561 ggccgtttta gcgcggcgcc gaccggccag ggccttcact gtcgccggat cggctgggta
     1621 gtgaaagcat tgaccacgtc gcggcggagc tcctcggctc tctcggctgc cgggtcggca
     1681 ggcgcgatcg gcgcaggagg tgcctctggt tcgactggag cgaggtccgg ctgggtcggc
     1741 ggcacggcgg gtagatcgag ccctgaaacc gtacgagcga gggcggccaa ctcctgctgt
     1801 gcctgccagc ctgccgtttc gggcaggtcg agcgcgctcc gaaatgcctc gccgagctcg
     1861 atggcgttgc tcggccggag cgccgccgtt ttggcgagcg cccgcgccat cagcacgtcg
     1921 agcacggccg gcgcgctccg gacgagcgcg gtcacgggct ccgccgcttc gtcgagctgc
     1981 gcggcccgca ccatgagctc gctccgctcc gggcgatcga acggggtgcg gccggtgagc
     2041 atctcgtaga gcacgatggc ggccgagtag agatcggagc gagcgtcttg cgcttcgccc
     2101 cgcacggctt cgggcgacat gtacgcgccc gtgcctgggg cgagcccgcc cgtcgcgctc
     2161 atgtccgccg tggggatgcg cgcgatgccg aagtcggtga gcttgaccac gccgtcggga
     2221 cgcacgagca cgttcgcggg cttcacgtca cggtgcagga taccgagctc gtgcaccgcc
     2281 gcgagcgcac cgagcagctg cgcaaagtaa tgccacgcga gcaggaacgg catgcacggc
     2341 gcgttcggcg acggtcgcgc cgccacggcg cgcgcgatga tgctcgagag cggctcgccg
     2401 taaacgagct ccatcacgag cgcgaggtgc ccctgatcct cggtgagcgc gaagaagtgc
     2461 acgacgttcg ggtgcgcgag gcgccggagc gcttcggcct cgcgccgaaa cattttctgc
     2521 gcgcggtcgc gcccgcggag cagcgggtgc agcaccttga ccgccacggg gtggggatcg
     2581 ctaccggcga agcgcccgtg cggatcgtaa tagagccagc cgcggtagac gatacccatg
     2641 ccgccttcgc cgagctcgtg gccgagcacg acgcgaccga agtcttcgac gctgagctcg
     2701 gagccggcgc cgaggcgctt gccagccggc agcagcggcg cgccgcattc aggacaaaat
     2761 cgcgcgacgt cttccacgac gctccggcag ctcgcgcaca ccgccataca cgccgagcct
     2821 agtatgaagt ctcggcgtgg ccggctccga gctcgaaaac ccgcaccaac gccgacgctt
     2881 ccttaagcag acgcgtaaga ggccgcgcgg cgccggccac cgggacggct agtgaacgga
     2941 gacacgaaca cgcgcgcctc ggcagcgcgg aggccgggta agtggccgtt gcgagggcct
     3001 ggcagtctat gaaactcttc tgccgatggc tcccgggccg cgcatgctgg tgcgcgacgc
     3061 cggccggcaa aatcaccaaa ggagaagtga gccttgcaga tctggcgaac actggcgcat
     3121 ggacgaacac gggggcggtc gtcctcgacc aacgtaggct tgttggtcgc cgtggcggtg
     3181 ctcggctacg cgtcgagcgc gacggcgcag gacgccatcg gcaaagaatt ctcggctcag
     3241 cgcttcgacc cggcgcccgg cccgcgcaac ttcttctcca cgcgcggcgc gcgcaccgac
     3301 ggcgaaatgg cctggagcgc ggggctcagc gtcaattacg cgaacacgcc gctcaaggtc
     3361 gagagctgca tctccgaaac accgggctcc tgcaaccaag cgttgcagac gcgcacgctc
     3421 aaggtgatcg agaacttggt gcaggccgac gtgctcggct ctttcacgcc gatcccgcgc
     3481 ttgcagattg gcttacggat cccagtcggt tttgccaagg gcaacggcat cgacgagttt
     3541 gcgcagccga aacccgtgag caaggtgggc atgcccgacc ccgagctcga ggtgaaggcg
     3601 cgcgtttacg gcgagctcaa ggatccggtc gtcctcggtg tcgccgtgta cgcgacggcg
     3661 ccgaccggtc atgcgacggc gcccggcgcg tacatgggcg acgagacgcc cggcgtcggc
     3721 ggtcgcgcga tcttggacgg aagcttcggc ccgctcgcgt tcggcgtgaa cctcggcggc
     3781 gtttttcgcg gcgagggccg catggatcag gccaaggtcg gttctgaaat gcgctacagc
     3841 gccgccgttg cgtaccagcc gagcccgctc ttgcgggtgc tcgtcgacgg cttcggcagc
     3901 acgcgcttta cgtcgaccgc cggcgagaac gcgctcgaga tcgacggcgg cgcgcaaatc
     3961 actccgctcg gctcgcactt cacgttccaa gccggcgcgg gcttcggtgc gctcagcggc
     4021 tttggcgtgc ccaccgtgcg cgctctcatc ggcggcagct acaccttcga aaagcgcgac
     4081 cgcgacaatg acggcatcga cgacgccgtc gaccaatgcc cgaccgagcc cgaggatcgt
     4141 gacggttacg aagactccga cggctgtccc gatcccgaca acgatctcga cacgatcccg
     4201 gacgcgcagg acaagtgccc gagccaagcc gaggacatgg acggcttcga ggacaccgac
     4261 ggctgccccg atcccgacaa cgacaaggac ggcatccccg acgtgagcga tcgttgtccg
     4321 aacgagcccg agacgaagaa cggcttcgac gacaccgacg gctgccccga ccaagccgac
     4381 cgcgatcgcg acggcgtgcc cgacgacaag gacgcgtgcc cggacgatgc cgaagacacc
     4441 gacggcttcg aagataccga cggctgcccc gatcccgaca acgacaagga cggcatcccc
     4501 gacgacaagg acgagtgcgt cgacgagccg gagaacttca acaagttcga ggacgaggac
     4561 ggctgccccg acgatccgaa gcagcgcacg cagcacccga agaaagagaa gaaggcgcct
     4621 gagcagcagc ccgagcccgg aaaggtgctc gagctgtgag aggtgcgcga gctccgagtc
     4681 gcacgctcgc ctggcgcatg gtcgtgcggg cggcgatcgt cgcgatgctc gctctgccgc
     4741 ttgcgtgcgg cgggtcctcg ggtccggtga actcgcccga aaacggcgag agggtcggtg
     4801 cgcaggcgcc ggacttctcg ctcgcaccgg tcggcggtgg cgcgccggtg ggtcccgccg
     4861 cgttcgtcgg caaggtcgtg atcgtcgatt tctgggcgac gtggtgcggt ccctgccggc
     4921 agtcgttccc cgcgtaccag cgtctgctcg gaaaattcga tggcaagctc gccgtgatcg
     4981 gagtgagcgt cgacgatgcg ccggacgaga tcgcgaagtt caagagtgag acgggcgtga
     5041 gcttcccgct cgtctgggat caggggcaaa tggtcgcggc gagttacaag ccgggcacca
     5101 tgccgaccgc gttcgtgatc gatcgagccg gcatcgtgca ctcgattcat cagggctttc
     5161 atgcgcatga ggagacgtcc ctcgagcaag agatccgctc gctcttgtaa cgtcgccgct
     5221 ctcgtgcgcc gctccgcata gcttcaccca ctcgcgctca caagcggtgg agccctgcca
     5281 ccgaaatgcg cgtgagaggg gggcggagcc ttgcgggggt gcccgcgcgc gcctcactat
     5341 catagggtga gacgaatctt tgcccgcgtc gtgttgccgc tgctcctcgt agcgagcaat
     5401 gcgctagcgg tgccgccgag cgtgagcgag ctcggcgatc gcttgaggag ctccgacgac
     5461 tttcgcgtgc ggctacaagc ggcgctagag ctcggcaagt ccgccgatcc cgacgcgctc
     5521 gcgccgctcg tgcgcgcgct cgacgatcag aacgcctcgg tgcgcacggc ggccgcggcg
     5581 gcgctcgagg agctcggcga tccgtccgcc gtgcccgcgc tcgagcgcca cgacgccgac
     5641 cgctccgagc aggtgcgcaa gcaagtgaag gcgacactcg cgacgttc
//
LOCUS       DATIML010000108         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4064494, whole genome shotgun sequence.
ACCESSION   DATIML010000108 DATIML010000000
VERSION     DATIML010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4064494"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..846
                     /locus_tag="VLJ38_01795"
     CDS             100..846
                     /locus_tag="VLJ38_01795"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU38259.1"
                     /translation="MDRRRKYKQYCGLARALDRVGERWTLLVVRNLMLGPRRYTDLLE
                     ELPGLTTNLLAERLRELEELELVVKRKAPPPVRASVYELTPAGRALEPALMELSRWGA
                     RFMDRPQRDDTVNVGWALLSLKRRYRGGLTLTAELNVDERSFDLAFTPTHLVVTEARA
                     ARPDVRVTGHWADVRAWLFVAGAAGSERAAAARAHELMRAGKLEVEGARAAFDALLSA
                     FSEREPSAEEVATRLASRELLTPLDGAASS"
     gene            complement(950..>1508)
                     /locus_tag="VLJ38_01800"
     CDS             complement(950..>1508)
                     /locus_tag="VLJ38_01800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38260.1"
                     /translation="DAEGTEVEIQGPALGSLGAEGESAAPSDRFAELLEAHHRPVRLH
                     AVMMLAYLGDPRAREALLKLREALREDEAPYLDRLLQATSELRVCRLAVKQELGGGSV
                     SGCLFNNAAESKKDLGVKLRGLDAPVLASDPVGNPPNLVAEDVLTVPGELPSQAGVVF
                     SARLPSLDAVPVAWEAIADRRDLLR"
BASE COUNT          221 a          491 c          556 g          240 t
ORIGIN      
        1 gctcggaatg ccgaagcgca cgaggttcga tgccatgcgc cgcacagtac tttagttttt
       61 attagtgctt agtattttaa tgcactaaga tgaccgagca tggatcgccg gcgcaaatac
      121 aagcaatatt gcgggcttgc gcgagcgctc gaccgcgtgg gcgagcgctg gacgctgctc
      181 gtcgtgcgca acctcatgct cggcccgcgc cgctacaccg acttgctcga agagctgccg
      241 gggctcacga ccaacttgct cgcggagcga ctgcgcgagc tcgaagagct ggagctcgtc
      301 gtgaagcgga aggcgccgcc gcccgtgcgc gcgagcgtgt acgagctcac gcccgccggt
      361 cgcgcgctcg agccggcgtt gatggagctt tcgcgctggg gcgcgcgatt catggatcgg
      421 ccgcagcgag acgacaccgt gaacgtcggc tgggcgctct tgtcgctcaa gcgacgctat
      481 cgaggcgggc tcacgttgac ggccgagctc aacgtcgacg agcgctcgtt cgacctcgcg
      541 ttcacaccga cgcacctggt cgtgaccgaa gcgcgcgccg cgcggcccga cgtgcgcgtg
      601 acgggccatt gggcggacgt gcgcgcgtgg cttttcgtcg ctggcgcggc tggatccgag
      661 cgcgccgccg cggctcgggc gcacgagctc atgcgggcgg gcaagctcga ggtcgaaggc
      721 gcccgagcgg cgttcgacgc acttttgtcg gccttttccg agcgcgagcc gagcgccgaa
      781 gaggtcgcga cacggctcgc ttcccgcgag ctcttgacgc cgctcgacgg agcggcctcc
      841 tcctgagcac gcgcaggccg aaggccgagc atgcgatttg gaggaggcaa gcccctcgca
      901 gcgccagccg cgcgagaagg gcgggtggag gcagcctccc ctgtttggtt cagcgcagga
      961 gatcgcgccg gtccgcgatg gcttcccacg cgacagggac cgcgtcgagc gagggcaagc
     1021 gagccgagaa cacgacgccc gcttggctcg ggagctcgcc gggcacggtg agcacgtctt
     1081 cggcgacgag gttcggcggg ttgccgacgg ggtcgctcgc gagcaccggt gcgtcgaggc
     1141 cacgcagctt gacgccgagg tccttcttgc tctcggcggc gttgttgaag aggcagccgc
     1201 tcacgctgcc gccgccgagc tcttgtttga cggcgagccg gcacacgcga agctccgagg
     1261 tcgcttggag caggcggtcg aggtagggcg cttcgtcttc gcgcagcgct tcgcgcagct
     1321 tgagcagcgc ttcgcgcgcg cgcggatcgc cgaggtaggc gagcatcatg acggcgtgga
     1381 gccgcacggg gcggtggtgc gcttcgagga gctcggcgaa gcggtcggac ggcgccgcgg
     1441 attcgccctc ggcgccgagg ctgccgagcg cggggccttg gatttcgacc tcggtgccct
     1501 cggcgtcg
//
LOCUS       DATIML010000109         2174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5509954, whole genome shotgun sequence.
ACCESSION   DATIML010000109 DATIML010000000
VERSION     DATIML010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5509954"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..620)
                     /locus_tag="VLJ38_01805"
     CDS             complement(<1..620)
                     /locus_tag="VLJ38_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HSU38261.1"
                     /translation="MATHLLAIDQGTTGTTALVMSQDGRTLGRATLEFPQHFPEPGWV
                     EHEPDEIWSSVLGALAEALKNAGVAGTDIAAIGITNQRETTLLWERATGRSVHRAIVW
                     QDRRTSERCAELKAAGASDTVRRTTGLVLDPYFSGTKLEWLLDHVPGARGRAEAGELC
                     FGTVDSYLVFRLGGGAAGGPHLTDVTNASRTLLMHLERRAWDPDMCR"
     gene            682..>2174
                     /locus_tag="VLJ38_01810"
     CDS             682..>2174
                     /locus_tag="VLJ38_01810"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU38262.1"
                     /translation="MARILLVSPDGQQVVELRDFNSLGRHPSNTIQLLDKIVSKEHCI
                     VERRGPAYVLRDLGSLNGTYVNGERVNGERELKHGDDIALGGTRARYDDGSGRPMPTA
                     QVHPQQYTQPVQQMAQQPAWAPQGAPQPPSQYGAHSAPATAPFMQVSAPGAMSPYSQG
                     QPAQGGIVPVATGTRVDVNDKARAIGTQIAAIQKGFLPVEQLMTNQQQLAADYERLRL
                     SHELSREIALERELPKLLTKILLTIFKFVRADRGVIFLMDERGELVPSASQRRDGTDS
                     PIQVSSTIMSHVIKERATVLTHDAAMDFAASKGKSMILNRIGSAIVAPLLHNNDILGV
                     LWLDSETLAQFQPKDMEIVTAIAAQAAMFIEITILGKKIEQEIVNRERFSRLLSPNVA
                     KRVLSGALEVKKGGQLVEECTVFNSDIRGFTRMSEGANPAAVVDMMNDYFEQMVEVVF
                     KYEGTLDKFMGDGIMALWGAPVVTKDDAVRAVECALEQMEVLRAFNAA"
BASE COUNT          388 a          746 c          694 g          346 t
ORIGIN      
        1 cggcacatgt ccgggtccca agcgcgccgc tcgagatgca tcaagagcgt gcggctcgcg
       61 ttggtcacgt ccgtcaagtg gggaccacca gccgccccgc cccccagccg aaaaacgagg
      121 tacgaatcga cggtgccgaa acagagctcc ccggcctcgg cgcggccgcg cgcgcccggc
      181 acgtgatcga gcaaccattc gagcttcgtg cctgaaaagt acggatcgag cacgagcccc
      241 gtcgtgcgcc gcacggtgtc gctcgccccc gcggctttga gctcggcgca gcgctcgctc
      301 gttctgcgat cctgccaaac gatcgctcgg tgcaccgagc ggcccgtggc gcgctcccac
      361 aagagcgtgg tttcgcgctg attggtgatg ccgatggcgg cgatgtcggt acccgccaca
      421 cccgcatttt tgagggcttc ggccagcgcg ccgagcacgc tcgaccaaat ttcatcgggc
      481 tcgtgctcca cccagcctgg ctcggggaag tgctggggaa actcgagcgt ggcgcgcccg
      541 agcgtccgtc cgtcctggga catcacgagg gccgtcgtgc ccgtcgtgcc ttgatcgatc
      601 gcaaggagat gcgtggccat gtcgcttggg gtctcctacc ccttgtaccc tcgcttgggc
      661 aaagctagcc tcaggccgcc catggcgcgc atcttgctcg tgtcacccga cggacagcag
      721 gtggtggagc tgcgcgactt caactccctc gggcggcatc cctccaacac gatccagctc
      781 ctcgacaaga ttgtgtcgaa ggaacactgc atcgtcgagc ggcgcggccc cgcgtacgtg
      841 ctgcgcgatc tcggcagttt gaacggcacg tacgtcaacg gcgagcgcgt caacggcgag
      901 cgcgagctca agcacggcga cgacatcgcg ctcggcggga cgcgcgcgcg ctacgacgac
      961 ggctccggcc gtccgatgcc gaccgcccag gtccacccgc agcagtacac gcaacccgtg
     1021 cagcaaatgg cccagcaacc cgcctgggca ccgcaaggcg caccacagcc ccctagccag
     1081 tatggcgccc attcggcgcc ggcgaccgcg ccgttcatgc aagtgagcgc gcccggggcg
     1141 atgtcgcctt attcgcaggg ccagccggcg cagggcggca tcgtgcccgt cgcgaccggt
     1201 acgcgcgtcg acgtgaacga caaggcgcgc gcgatcggca ctcagatcgc cgcgattcaa
     1261 aagggcttct tgcccgtcga gcagctgatg accaatcagc agcagctcgc cgccgactac
     1321 gagcgcttgc gcctttcgca cgagctttca cgcgaaatcg cgctcgagcg cgagctgccg
     1381 aagctcctca ccaagatcct actcacgatc ttcaagttcg tgcgcgccga tcgcggcgtg
     1441 atcttcttga tggatgagcg cggcgagctc gtcccgagcg cgagccagcg ccgcgacggc
     1501 accgattcgc cgattcaagt ctcgtccacg atcatgagcc acgtgatcaa ggagcgggcg
     1561 accgtgctca cgcacgacgc cgccatggac tttgcggcct ccaagggcaa gagcatgatc
     1621 ctcaaccgga tcggctcggc catcgtggcg ccgctcttgc acaacaacga catcctgggc
     1681 gtgctctggc tcgacagcga gacgctcgcc cagtttcagc cgaaggacat ggagatcgtg
     1741 acggccatcg ccgcgcaggc cgcgatgttc atcgagatca ccatcctcgg taagaagatc
     1801 gagcaggaga tcgtcaatcg cgagcgcttc agccgcttgc tctcgccgaa cgtcgccaag
     1861 cgcgtgctct cgggcgcgct cgaggtgaaa aagggcgggc agctcgtcga ggagtgcacc
     1921 gtgttcaact ccgacatccg cggcttcacg cgcatgagcg agggcgcgaa cccggccgcg
     1981 gtcgtcgaca tgatgaacga ctacttcgag cagatggtcg aagtcgtgtt caagtacgag
     2041 ggcacgctcg acaagttcat gggcgacggc atcatggcgc tgtggggtgc gccggtcgtc
     2101 accaaggacg acgctgtgcg cgccgtcgag tgtgcgctcg aacagatgga agtgctgcgg
     2161 gccttcaacg ctgc
//
LOCUS       DATIML010000110         3127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4354172, whole genome shotgun sequence.
ACCESSION   DATIML010000110 DATIML010000000
VERSION     DATIML010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3127
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4354172"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..486
                     /locus_tag="VLJ38_01815"
     CDS             <1..486
                     /locus_tag="VLJ38_01815"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSU38263.1"
                     /translation="NDVLTGTAAADCIVGLGGQDTINAGGGDDIVFAGEGNDVVTGGD
                     GNDQLFGGGGQDNLQGNAGNDQLNGEDGDDVLHGNDGDDVLSGGQGQDRLFGDAGSDT
                     LNGDVGDDQLQGGDGDDTLSDCTNHNVLNGGTGTNTCQASTTGINSSSLTSCQTTTKC
                     P"
     gene            complement(592..1185)
                     /locus_tag="VLJ38_01820"
     CDS             complement(592..1185)
                     /locus_tag="VLJ38_01820"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSU38264.1"
                     /translation="MIRSFALADVLTLLNGACGTGSVFALMQYLVSAERRWLLVAFVL
                     LPLALIFDVADGRVARWRRESSALGADLDSLADTLSFGLAPAALGFAVGLRGSVDVAI
                     LVYFVACGISRLARFNVTAADLADGSGKVKYFEGTPIPTSVVIVGLLAFLDHHGLLGE
                     HPWLGSLELAGLTLHPLALIYAVSGSAMISTVRIPKI"
     gene            1251..2507
                     /locus_tag="VLJ38_01825"
     CDS             1251..2507
                     /locus_tag="VLJ38_01825"
                     /inference="COORDINATES: protein motif:HMM:NF044863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38265.1"
                     /translation="MPRDRAYPPDLARFVEARWPREAPPLHLSSRGLAEALSVAFQAS
                     LTSEETRPTRFRLLLTPLDQLPELGVPNRGVLRLRFEQSRALHEDELRRLAPAAPFET
                     SLIGVQEEAEGKLAIWGVAHSGPAWLAPTWGGRSPVPNWTYDPIVHVTAPGKLAVRSA
                     GRLIGALERGLVVDATVDVFESTWLPALFEEERELIRAEHAATQRESVVPTFVDHSLV
                     GRVSQHMLRRAIQLIRGARHGGMLLVAGATGSAPRGLRLKYRVSQDEPSHRYRSLQLE
                     IFETLASSTTNPSVGWDDFVASSHPRLEELERQVFELSRAIANLAAIDGAVLLDKRFG
                     ILGFGAEVSAELPPPERVLRALDSEGDVRVPDDIEKVGTRHRAAYRFVNDHPGSLAMV
                     VSQDGGVSFVTRQSGDVVVWEQSVSP"
     gene            complement(2536..2925)
                     /locus_tag="VLJ38_01830"
     CDS             complement(2536..2925)
                     /locus_tag="VLJ38_01830"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSU38266.1"
                     /translation="MAAKPMTPEERSKVFKALSDPRRVEIVEQLAKGSQCGTTLAESL
                     GISVALLSHHWEVLVQAGILKKERQGQRRVCSLECERLREAMTMGGAWELSLAVPEQA
                     PPRANTPRPKKRAATKRAARPTTKKPA"
BASE COUNT          546 a         1053 c         1056 g          472 t
ORIGIN      
        1 aacgacgtgc tcaccgggac ggctgcggcc gactgcatcg tggggctcgg cggtcaggac
       61 accatcaacg cgggcggcgg ggacgacatc gtgttcgctg gcgaaggcaa cgacgtcgtg
      121 accggcggag acggcaacga ccagctcttc ggcggcggcg ggcaggacaa cctgcagggc
      181 aatgccggca atgaccagct gaacggcgag gacggcgacg acgtcctcca tggcaacgac
      241 ggcgacgacg tgctctcggg cggccagggc caggatcggc tgttcggtga cgccggcagc
      301 gacacgctga acggcgacgt cggcgacgac cagctccagg gcggcgacgg cgacgacacc
      361 ctgtccgact gcacgaatca caacgtgctc aacggcggca ccggcaccaa cacttgccaa
      421 gccagcacca cgggcatcaa ctcgagctct ctcacgagct gccagaccac gacgaaatgc
      481 ccgtgagcca ctgagacacg cctctcggcg aatccatgac gaccctcgtg ttgcgcgccg
      541 tacggcaagc gcccacgtgc gcgcagcgcg agtgtcgcac caacgtccgg cctaaatctt
      601 tggaatgcgc acggtgctga tcatcgcgct gccactcacc gcgtagatga gcgcgagcgg
      661 gtgcagcgtg aggcccgcga gctcgaggct accgagccac gggtgttccc cgagcagtcc
      721 gtgatggtcg aggaacgcca gcagtccgac gatcacgacg ctggtcggga tcggggtgcc
      781 ctcgaaatac ttgaccttgc cggagccgtc ggcgaggtcg gccgccgtga cgttgaaacg
      841 cgccaaacgg ctgatgccgc aggcgacgaa gtagacgagg atcgccacgt cgacgctgcc
      901 ccgtaggccg acggcgaagc cgagcgcggc tggcgctagt ccgaacgaga gggtgtccgc
      961 gagtgaatcg agatcggcac cgagcgcgga ggactcccgc cgccaacgcg cgacccggcc
     1021 gtcggcgacg tcgaaaatca aagccagggg gagcagcacg aatgcgacga gcagccagcg
     1081 gcgctccgcg gagacgaggt actgcatcag cgcgaagacg ctacccgtcc cgcaggcacc
     1141 gttcaggagc gtcagcacgt ccgccagcgc gaacgagcgg atcatcgaga atcggcccgt
     1201 cttcaaatgt ggcgcgggtg gctccatcgg cggcgactat actgcgccgc gtgcctcgcg
     1261 atcgcgccta tcctcccgac ctcgcccgct tcgtcgaggc gcgctggccg cgcgaagcgc
     1321 ctccgttgca cctatcgtcg cgcgggctcg cagaagcgct ttcggtcgcc tttcaggcgt
     1381 cactcacgag cgaagagacg cgcccgacgc gctttcggct gttgctcacc ccgctggacc
     1441 agctgcccga gctcggggtg ccgaatcgag gcgtgctccg gctccgtttc gagcagagcc
     1501 gcgcgctgca cgaggacgag ctgcggcggc tcgcaccggc cgcgccgttc gaaacgtcgc
     1561 tcatcggcgt tcaagaggag gcggagggaa aactcgcgat ctggggcgtc gctcattcgg
     1621 gaccggcatg gctcgcgccg acctggggtg gtcgcagccc cgtacccaac tggacgtacg
     1681 atcccatcgt gcacgtgacg gcgcccggca agctcgcggt gcgctccgcg ggcagattga
     1741 tcggtgcgct cgagcgcggg ctggtcgtgg acgcgacggt cgacgtgttc gaatccacgt
     1801 ggttgcccgc gctgttcgag gaagagcgcg agctgattcg cgccgaacac gctgcgacac
     1861 aacgcgagag cgtcgtgccg accttcgtcg atcattcgct ggtcggtcgc gtgagccagc
     1921 acatgctacg gcgcgccatc cagctcatcc gcggcgcgcg gcacggcggc atgttgctcg
     1981 tcgcgggcgc aacgggcagc gcgccacgcg gtttgcggct caagtaccgc gtcagccaag
     2041 acgagccgtc ccaccgctac cgcagcctgc agctcgaaat tttcgagacg ctcgcgagta
     2101 gcacgacgaa cccgtccgtc ggctgggacg acttcgtagc gagctcgcac ccgcgcctcg
     2161 aagagctcga gcgacaggtc ttcgagttgt cacgcgctat cgcgaacctt gccgccatcg
     2221 acggcgccgt gctcctcgac aagcgctttg gcatactcgg cttcggcgcc gaagtgtcgg
     2281 ccgagctgcc gccgcccgag cgggtcctgc gcgcgctcga cagtgaaggc gacgtgcgcg
     2341 ttcccgacga tatcgaaaag gtgggcacgc gccatcgcgc cgcctatcgc ttcgtcaacg
     2401 accaccccgg ctcacttgcc atggtggttt cgcaagacgg cggcgtgagc ttcgtgaccc
     2461 gccaatccgg cgacgtggtc gtgtgggagc agtccgtcag cccgtgaagg gccgcccaag
     2521 accgtgacgg gaatgtcacg cgggcttctt cgtagttggc cgagcggctc gcttggtcgc
     2581 ggcgcgcttc ttcggacgag gcgtgttggc acgaggcggt gcttgttccg gcaccgcgag
     2641 cgagagctcc cacgcgccgc ccatcgtcat cgcttcacgc aagcgttcgc actcgagcga
     2701 acagacgcgg cgctggcctt gacgctcctt cttgaggata ccggcctgaa ccagcacttc
     2761 ccagtggtgc gagagcaggg cgacgctgat gccgagcgat tctgcaagcg tcgtgccgca
     2821 ctgtgaaccc ttggcgagct gctcgacgat ctcgacccgt cgcggatcgg acagggcctt
     2881 gaacaccttc gagcgctctt ctggggtcat cggtttggcg gccatcgcac ggaaacaata
     2941 gcacgagccc gcgggccagc ttgcatactc aaatatctgt ttgactatgc gaatgtccgg
     3001 cgccagactc gtcggcatgc acgcaaaaat ccaaggcaga ggtaccgttc gagcggcagc
     3061 gcgcgcgctc ggcgccgtga gcttggtcgg gtcgctcacg gcgctcgcgg gctgcggaca
     3121 ggacctg
//
LOCUS       DATIML010000111         3913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4932087, whole genome shotgun sequence.
ACCESSION   DATIML010000111 DATIML010000000
VERSION     DATIML010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4932087"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1208)
                     /locus_tag="VLJ38_01835"
     CDS             complement(<1..1208)
                     /locus_tag="VLJ38_01835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38267.1"
                     /translation="MGPVARRRLLGATILLASTGCQLVLGDFTVEGTPSPPAKPLDTV
                     CAPNTYLCSGNQLQTCSDERSGWTGIADCASADQCDPTAGTCRTCVSGEFACNGATLQ
                     KCEATGHWLPIAPPCDSPELCHVAVDRKSGTCPPSPCPPGNGHSCTGNRLERCSDSRD
                     QLLLADRCGSAALCDVAKADAQIAPGVLGTCQPTTCHFGQFACDGATLERCNDDQNGW
                     TALTTCPDAASCNPLKGDCTPCAPNDTVCSGSDLLRCGTNGFAPVARCKAVELCNAAL
                     GRCDQPACSVPGALRCTADEPPRLEECGNDLRWNLRDACAGPTLCSVSAGRCLPPACE
                     LDDTRCVGQELQRCGDDRSRWVVKQTCSATEVCDPSGCLPAPCTEGNARCNSGTFERC
                     VSGAWVPLHR"
     gene            complement(1212..2132)
                     /locus_tag="VLJ38_01840"
     CDS             complement(1212..2132)
                     /locus_tag="VLJ38_01840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38268.1"
                     /translation="MAWAEPTEADRATARSLASEGYDALERKDYATAVDRFRHADALV
                     HAPTIGVDLARALIGLGRYVEAYERYELVIREGVPKNSPASWKQAVDDAQKEAADLEP
                     RLGWIVIHVMGPLDPQVTIDGDDVPEGSIGVRRAADPGKRTVRASAPDFEPAAQTVTI
                     KEGQEQVVTLVLKRSPTPHPATPAVNEPSEAPPPPHQTSRVPMWIAFGAGGAGIIVGS
                     VTGVLALNLHSELAPKCPKGVCPPELQSDVNRYRALGITSGIGFGVGVAGAATGLVLL
                     FTGAAVDRAAQRASLWPVIGPREIGMAGRF"
     gene            2643..>3913
                     /locus_tag="VLJ38_01845"
     CDS             2643..>3913
                     /locus_tag="VLJ38_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HSU38269.1"
                     /translation="MRRPNPGDALASLLQQSDGGERRASFRQAITALGQSGSAYGPPP
                     LDGVDPEVLSRSAQLALDTGLADDLAWIAPGPGAVALYEITAALPPGRARRELGRRVF
                     ARVYEGTAATFAIVAARMALGSGRTFEAAAVRARIGLVLDMPIGAAVNPDPLALTLTT
                     SRELRDTWLLSARTGTLHERRLAAKILEYAAREAAARAHQGDPHPMLHLLQGDIRDVY
                     EQLLADREPLVWRHAATARGLLSVVAPAFQSEIESGLDEALTPTEWRRAAVSLVASIP
                     ADPEQTIRACRRVVEGPLGKRDPGIAATLVLGLPRVIEAEPEAAEQLLDLVASTRRPD
                     VAEAVAALLGDLTSTTFGRVAAQKLRATLTSRAEGPGSVLRAIAERSLRLLDGEVDDD
                     DDDLVGALRRAMMAFENVGARAAHELAQKAAS"
BASE COUNT          590 a         1391 c         1316 g          616 t
ORIGIN      
        1 cagcgatgca gcgggaccca tgcgcccgac acacaacgct cgaatgtgcc gctattgcag
       61 cgcgcgttgc cctcggtgca aggagcggga agacaaccgc tcggatcgca cacctccgtc
      121 gccgaacaag tttgcttcac gacccagcgc gagcgatcgt cgccgcagcg ttgaagctcc
      181 tgtccgacac aacgggtgtc atcgagctcg cacgccggcg gcaggcaacg tccggcgctc
      241 acgctgcaga gcgtcgggcc cgcgcacgcg tcgcgtaggt tccagcgcag gtcgttgccg
      301 cattcttcca ggcgcggcgg ttcgtccgcc gtgcagcgca acgcgccggg cacggagcac
      361 gccggctggt cgcagcgtcc gagggcagcg ttgcagagct cgaccgcctt acagcgtgcg
      421 actggggcga agccgttcgt cccgcagcgg aggaggtccg agccgctgca cacggtgtcg
      481 ttcggcgcgc acggcgtgca gtcgcccttc agcgggttac agctcgcggc atcgggacag
      541 gtcgtgagcg cagtccagcc gttttggtcg tcgttgcaac gctcgagcgt agcgccgtcg
      601 caggcgaact gaccgaaatg gcaggtcgtt ggctggcagg ttccgagcac gccgggcgcg
      661 atttgcgcgt ccgctttggc cacgtcgcag agcgcggcgc tgccgcagcg atccgcgagc
      721 aagagctggt cgcggctgtc ggagcagcgc tcgaggcgat tgcccgtgca gctgtgcccg
      781 ttgccgggcg ggcacggcga cggggggcaa gtccccgact tgcgatcgac ggcgacgtgg
      841 cagagctcgg ggctgtcgca cgggggcgca atcggtagcc agtggcccgt cgcttcgcac
      901 ttttggagcg tcgcgccgtt gcacgcgaac tcaccggaca cgcacgttcg gcaagtcccc
      961 gccgtaggat cgcactgatc ggcgctggcg cagtccgcaa tgcctgtcca cccgctgcgc
     1021 tcgtcggagc aggtttggag ttggtttccg ctgcaaagat acgtgtttgg agcgcagacc
     1081 gtgtcgagcg gtttggcagg tgggctcggc gtgccttcga ccgtgaaatc gcccagcacc
     1141 aactgacagc cggtcgaagc gagcagtatc gtggcgccga gcagccggcg tcgcgcgacc
     1201 ggacccaagg ctcagaacct tcccgccatg ccgatctcgc gcggcccgat cacgggccag
     1261 agggacgctc gctgggccgc ccggtctacg gctgcccccg tgaaaagcag gacgaggccg
     1321 gttgcggcgc ccgcgacgcc cactccgaag ccgatgcccg acgtgatgcc gagcgcacga
     1381 tagcgattca cgtccgactg cagctcgggc gggcagacgc ccttcggaca ttttggggcc
     1441 agctccgagt gcagattcag cgccagcacg cccgtcacgc tgccgacgat gatgcccgca
     1501 ccgcccgccc cgaacgcgat ccacatggga acgcgggagg tttggtgcgg cgggggcggc
     1561 gcttcgctcg gctcgttcac ggccggggtc gccgggtgcg gggtcggcga acgcttgagc
     1621 acgagcgtca ctacctgctc ttgaccctct ttgatggtga cggtttgcgc cgcaggctcg
     1681 aagtccgggg cgctcgcgcg cacggtgcgc ttacccggat cagccgcgcg gcggacgccg
     1741 atcgagcctt cgggtacgtc gtcgccgtcg atcgtcacct gaggatcgag cggccccatg
     1801 acgtgaatca cgatccaacc gagtcgcggc tcgagatcgg cggcctcttt ctgcgcgtcg
     1861 tcgaccgcct gcttccacga agcgggcgag tttttcggga caccctcgcg aatcacgagc
     1921 tcgtaacgct cgtaggcttc gacgtagcgc ccgaggccga tgagcgcgcg agcgagatcg
     1981 acgccgatcg tcggcgcgtg cacgagcgcg tccgcatgcc ggaagcgatc gacggcggtc
     2041 gcataatctt tgcgctcgag cgcgtcgtag ccttcactcg cgagtgagcg cgccgtcgca
     2101 cgatccgctt cggtcggctc cgcccacgcc acccgagggg cgaggagcga tccgcaaagc
     2161 agggcgccga gcgcaccttt gactaagcca cgaccaagaa tcacacgttt tcgcgtactc
     2221 ctcacgcgga ggcggcgcaa gtcgtggagg cggcgcaagc gccggcagcg cggcagcgtg
     2281 attttattac ccaaggcttg cgcgcggctt cccgccggat ccgggcagtt cggctcaaag
     2341 agatgctcat ttcccggcga gcacccgaac cgacacgagc ttcggatcgg agacgatttc
     2401 ataccgtccc tcacatcacg cacgcgtcgt cggcgggcta gcggcaccct ccactttcgc
     2461 ttcagtaaga acgaaacctc gcgcggaggt ctatcgaacc ctgctcggcg tgtcgtagag
     2521 cccttcgccc cctccctgct cggcccgttc gaaggcagcg ttcggctccc cctcctcgtc
     2581 gggcgtccgg acctgctact ctgccggaca ggtgggaccc ggcccaccgg gaaatccgca
     2641 ccatgcgacg accgaatcct ggcgatgcgc tcgcctccct gctgcagcag tcggacggtg
     2701 gggagcgtcg tgcgagtttt cgtcaggcca tcacggcgct cggacagagc ggcagcgcct
     2761 atggtccgcc accactcgac ggtgtcgatc ccgaggtctt gagccgctca gcgcagctcg
     2821 cgctcgacac cggcctggcg gacgacctcg cctggatcgc gccgggtccg ggagccgtag
     2881 cgctctacga gatcacggcg gccttgccgc cgggccgcgc gcggcgcgag ctcggccggc
     2941 gcgttttcgc ccgcgtttac gagggcacgg cggctacgtt tgccatcgtc gccgcgcgta
     3001 tggcgctcgg ctccgggcgc actttcgaag cggctgccgt gcgcgctcgc atcggcctcg
     3061 tgctcgatat gcccatcggc gcagcggtca atcccgatcc cctcgcgctc acgctcacga
     3121 cgtcgcgcga gctccgggac acctggttat tgtcggcgcg cacgggcacg ctccacgagc
     3181 gccgtctcgc cgccaagatc ctcgagtatg ccgcgcgtga agccgccgcc cgcgcgcacc
     3241 agggtgatcc tcaccccatg ctgcacctac tccagggcga cattcgcgac gtttacgagc
     3301 agctgctcgc cgatcgcgaa ccgctcgtct ggcgtcacgc cgccacggct cgcgggctgc
     3361 tttcggtcgt cgcccctgct tttcaaagcg agatcgagag cggactcgac gaagcgctca
     3421 cgcccaccga atggcggcgc gccgccgttt cgctggtggc gtccattccc gccgatccgg
     3481 agcaaaccat tcgcgcttgc cgccgcgtgg tcgaagggcc gctcggcaaa cgcgaccccg
     3541 gcatcgccgc gacgctcgtg ctcggcctgc cgcgcgtgat cgaagccgaa cccgaggcgg
     3601 ccgagcagct gctcgacctc gtcgcttcga cgcgccggcc cgacgtcgcg gaagccgtcg
     3661 cggcgctgct cggcgatctc acgagcacga cgttcgggcg cgtcgccgcg caaaagctgc
     3721 gcgccacgct cacctcgcgc gccgaagggc ccggctccgt gctgcgcgcc atcgccgagc
     3781 gctcgctgcg cctgctcgac ggcgaagtcg acgacgacga cgacgatttg gtcggcgcgc
     3841 tccgccgcgc gatgatggcc ttcgagaacg tcggagcgcg cgccgcacac gagctcgctc
     3901 agaaagccgc ctc
//
LOCUS       DATIML010000112         8903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_312725, whole genome shotgun sequence.
ACCESSION   DATIML010000112 DATIML010000000
VERSION     DATIML010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8903
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312725"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..941)
                     /locus_tag="VLJ38_01850"
     CDS             complement(72..941)
                     /locus_tag="VLJ38_01850"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HSU38270.1"
                     /translation="MSRPFDAQRFGALSEKLTLGRPLVATLATGSTNDDALAAARDGA
                     PHGALFVTEEQSRGRGRRGSRWLAARGEGLLFSLVLRPTLSAERAPLLALLTGLAVRD
                     VVSALLVSASVNRAALVKWPNDVVIAGDELEKLAGILVESQVRGSALASAVVGVGLNV
                     GRLELPGDLRPTPTSLARLGISVEREELLAKILERIEARLRALENHAAPFDVLAAELS
                     AVDALRGRNLRVENLCGRGAGIDAGGYLCIMDEARVTHRVGSGHVELLERFGGQGHRE
                     RRTGPETEPPLRK"
     gene            complement(938..1792)
                     /gene="nadC"
                     /locus_tag="VLJ38_01855"
     CDS             complement(938..1792)
                     /gene="nadC"
                     /locus_tag="VLJ38_01855"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HSU38271.1"
                     /translation="MIAPLADAMIDRALAEDLAAGDVTSEAVVPSTLKATARALAKQP
                     LVLAGGDVFARVFYRVDAGVRVERLVDDGAHVESGTPLFSIEGPARSLLAAERTALNF
                     VQRAAGIATLTARFVAAVPPGTKLRIIDTRKTTPGLRALEREAVRAGGGKNHRDHLGS
                     AVLIKDNHVAIAGGVRNAVLRAKERAAHVTRVEVEVDTLDQFDEALGAEAEVVLLDNF
                     TLADVAEAVRRNRGRALLEVSGGVRLEHIAELAHLGIDVVSLGALTHSAPAADISLEI
                     VPLGASVA"
     gene            complement(1789..2526)
                     /gene="mrtC"
                     /locus_tag="VLJ38_01860"
     CDS             complement(1789..2526)
                     /gene="mrtC"
                     /locus_tag="VLJ38_01860"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_153820910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MrtC family glutamic-type intramembrane
                     protease"
                     /protein_id="HSU38272.1"
                     /translation="MLPQSDEPPPGAPPRARSASPPIAVTIVTTAVVTALSYGLPDAY
                     QATGVGLVFLGATYVLVLRRDSESVRRHGLSLGGLFESEPLSARRLLRAFAGALAWAV
                     AVACVVLPPFWLGWVVFWKPTGPFLPARLASVLDEVLGQWLVIALPEECFYRGYLQTE
                     LDRVWQPRVRVLGAPLGPSLVVTSALFAAGHLATELSVNRLAVFFPSLLFGWLRSRTR
                     GVGASIALHAACNLFAAYLARSYGLGR"
     gene            2769..5483
                     /locus_tag="VLJ38_01865"
     CDS             2769..5483
                     /locus_tag="VLJ38_01865"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU38273.1"
                     /translation="MLEPNLPNSPAPTHVPTALPHVDLAKWPPDDDMPGAPPSPGIPA
                     GGGFGGYGGGDGDFKKGRFNPAVIVVGILMVAGAAGFLLIGAKKDAERLTIEQGEQIK
                     KDIFVKPKAEQIPLWREWAAKESSDEVRAEALKQLAWARDPQGVPLAATALAYPSEAV
                     QGMAALALTEYGSPMADGAKDSLLAALKTAGPGAKPQIAWALVVLGDTRALDDVMNLY
                     RLGHLSKVQRLGGGIAFNPDKIVNLIGIDKLATMADDKSAAVRQLVATVLSAHAESKY
                     TDVLIKLVKDSDPEVQRQAAPGLGKIGDARAREPLVAALRGADKETRTKYFEALRDGV
                     GTEGLVVALDAAPTEEAPDEQNHPGKAAWYFRKQILNMIYVFDATDAMKAGQGLNDPS
                     GADALYKYIQTNPHIHLQTHAALALAAIGDLRAVPTLAKRLRMDPLKIYSDQNDWEMG
                     LKRSDDERVQSARMIADLAILHPDKLPLIQEQAEDAVIFWIHEMPSPHANGLRALAAM
                     GSTKDIEAFRKWADPDVPMPKEGQQPPMPEEWVVAQSALRYVGWLKDPKSWKSLEKAI
                     KANAKEYDVTMDGLYQGGLAILGMTYRALGVGAADGFSEWRDNKAFKMLMKYVENPKE
                     NEQSRMEACAALAWVAEKDDFLEVAKKIQQYSGNEKPDEVRRACFLETLIQRPIPGTA
                     NALISLFTPEAAIETRHQVARALAKSGFDAAVESKLVELLDNEVLMNDAALALMLGGS
                     PDAAARAVAYYGKKPWNVAKPALDELSDLWYKSFGYWSTDDLEAGLLFKYVDNAEAMS
                     HVTINQTPQEWARVLLISQFDNLLYDNGPHSFTRVVLRKRLYDMAKGSDEAKRAGAIR
                     TLKFMKEQGVLLTLKGEAGPAGELARQAYFELMNPKVVTGVTVPDDKK"
     gene            5486..6037
                     /locus_tag="VLJ38_01870"
     CDS             5486..6037
                     /locus_tag="VLJ38_01870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38274.1"
                     /translation="MRAGAAWACVLGLAPACAAPSARVPRSEAPVLERASVTTAPELC
                     GNALDDNGNGLADEGCGTTTSAVSFLIAWDEPNADVDLRVVDPNGELVEVGRPSESGL
                     VRERDCPGREGECRGKNLESVYQEQGEPAEGKYVARILLVSLGGAAAPVVVRFSARLG
                     ARAYGATVSLPRVDSDWQMPFML"
     gene            6134..6361
                     /gene="tatA"
                     /locus_tag="VLJ38_01875"
     CDS             6134..6361
                     /gene="tatA"
                     /locus_tag="VLJ38_01875"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSU38275.1"
                     /translation="MGSLSPIHWLLVIVVLLLVFGPTRLAGAGKGLGEGIKAFKKGLT
                     DDDEKPVEEAKKPEPEAKALEKAPEKPAGSA"
     gene            complement(6401..7159)
                     /locus_tag="VLJ38_01880"
     CDS             complement(6401..7159)
                     /locus_tag="VLJ38_01880"
                     /inference="COORDINATES: protein motif:HMM:NF008102.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HSU38276.1"
                     /translation="MIRIRAARALEIAGNDATEDFGHSFMLDGTPAGSQRLDIISLIT
                     HLDVHLAEWARALGPWLYAALFAIVFAETGLVVTPFLPGDSLLFAVGALCTIEGMPLN
                     VYLVIPLLIAAAVLGDAVNYAIGSKLGPAVFTSERSLLFNKKHLYRTQSFYDRYGGKT
                     IIIARFVPIVRTFAPFVAGIGKMRYPRFLAFNVVGACGWVVLLTAAGYALADQPVVKK
                     QFHLVIIAIILISILPAGVEITREWMRARKTPAA"
     gene            7163..7612
                     /locus_tag="VLJ38_01885"
     CDS             7163..7612
                     /locus_tag="VLJ38_01885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38277.1"
                     /translation="MRVPRTWLERGAVVELELPRNLVCATCDGGGCDSCERSGAVTLR
                     GRGEPADLLRVTLPGEQSEAFVIRLPERGGLPPLGSGLPRGHLLLRVEPSAQADASVA
                     LATSLPALGAIRRALSVRPVLVRRARGVFWAFAIGVLLLAVWLLFRR"
     gene            7609..>8903
                     /locus_tag="VLJ38_01890"
     CDS             7609..>8903
                     /locus_tag="VLJ38_01890"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSU38278.1"
                     /translation="MNPLLMGALLVGLWGVFAVSAVRRLRLLGAGAPTWEPRFDRLGQ
                     RLAAVVRFALLQVKMPNYPLAAAGHYLIFFGFVVLLLRTLVLWGRGFDPTWNLFVLGP
                     EPVLGLPLGEVYGFVKDVFALLVLAGSVIFVYLRAIRREKRMTLSGEGLVILGIIMAM
                     MLADLSYDGASLLLNQRFASECGSRPADFCDVARQLVAPLGPPRQGLGFFPEPGASLF
                     AFAFQGLGSSALTSVARGGFWLHSTLVLIFLNILPFTKHFHIITAVPNVFLGDLSTHG
                     RLRPLAPNTEALMSLVEKATEAEDVLAARVGYARLAHFPWKDYLDFYTCTECGRCSDN
                     CPAFITGKLLSPKQFTLDLRDQLYGRGTAPKDLVPDVIKPEVLWACTTCRACEEQCPV
                     NITYVDKIVQMRRNLVTIRGEFPTELQKPFTGMETNGNP"
BASE COUNT         1525 a         2922 c         3018 g         1438 t
ORIGIN      
        1 tctttatgcc tcgtctctca ccggatcgca agcggtccgt gggcggcttc ttcgctttcg
       61 gttcgcttcg gtcactttcg cagggggggc tcagtttcgg ggccagtccg tcgctctcgg
      121 tgaccctgcc cgccaaacct ctccaaaagc tcgacgtgac cgctccctac ccggtgtgtc
      181 acacgcgcct cgtccatgat gcacaagtag ccgcccgcgt cgatgccggc gccccgacca
      241 cacaggtttt ccacgcggag gttcctgccg cgaagcgcgt ctaccgcgga gagctcggcc
      301 gccaaaacgt cgaagggggc tgcgtgattt tcgagggctc gcagccgagc ttcgatgcgc
      361 tccaggattt tcgcgagtag ctcttcacgt tccacgctga tgccgagtct ggcgagcgag
      421 gtcggtgtcg gccgtagatc gcccggaagc tcgagccgtc ccacgttgag acctacgccg
      481 acgacagctg aggcgagcgc gctaccgcgc acctgacttt ccaccaagat cccagcgagc
      541 ttctcgagct cgtcgcccgc aatcacgacg tcgttcggcc acttgaccag tgcggcgcgg
      601 ttgacgcttg ccgacacgag cagtgcagaa acgacatcgc gtacggccaa gcccgtgagc
      661 aacgcaagca gaggagcgcg ttcggcgctc aaagtcggcc gcaacacgag tgagaacaac
      721 aatccttcac cgcgtgcggc gagccagcga ctgccccgac ggccgcgtcc tctgctctgc
      781 tcttcggtca cgaagagcgc gccgtgggga gcgccgtcgc gcgccgccgc gagcgcgtcg
      841 tcgttcgtcg agccggtcgc gagcgttgcg acgagcggcc ggccgagcgt cagtttctcg
      901 ctgagcgcgc cgaagcgctg tgcgtcgaac ggccggctca tgcgacgctc gcgccgagcg
      961 gcacgatttc gagcgaaata tcggccgccg gggccgagtg cgtcagcgcg ccgagcgaaa
     1021 ccacgtcgat gccgaggtgc gcgagctccg cgatgtgctc cagccggacg ccgccggaca
     1081 cttcgagcaa cgcgcgtccg cggttgcgcc gcacggcttc cgccacgtcg gcgagcgtga
     1141 aattgtcgag cagcacgacc tcggcttcgg cgccgagcgc ctcgtcgaac tggtcgagcg
     1201 tgtccacttc gacttcgacg cgcgtcacgt gcgcggctcg ctccttcgcg cgcaacacgg
     1261 cattgcgtac accgccggca atcgcgacat ggttgtcctt gatcaggacg gcggagccga
     1321 ggtggtcgcg atggttcttg ccgccgcccg cgcggacggc ttcgcgctcg agcgcccgca
     1381 ggcccggcgt cgtcttgcgg gtatcgatga tgcggagctt cgtgccgggg gggacggcgg
     1441 cgacgaagcg cgccgtgagc gtcgcgatgc cggcggcgcg ctggacgaag ttcaaggccg
     1501 tgcgctcggc cgcgagcagc gaacgcgccg gcccctcgat gctgaagagc ggggtgccgc
     1561 tttcgacgtg cgcgccgtcg tcaacgagac gctcgacgcg gacgcccgcg tcgacgcggt
     1621 aaaaaacgcg ggcgaaaacg tcgccgcccg cgagcacgag cggctgcttg gcgagcgcgc
     1681 gcgcggtcgc cttgagcgtg ctcggaacca cggcttcgct cgtcacgtcg ccggcggcga
     1741 gatcctcggc gagcgctcga tcgatcatgg cgtcagcgag cggggcgatc atcgcccgag
     1801 accgtagctc cgcgccaggt acgcggcaaa gaggttacag gccgcgtgca gcgcgatgct
     1861 cgcgccgact ccgcgtgtgc gcgaccgcag ccaaccgaag aggagcgacg ggaaaaacac
     1921 cgccaggcga ttcaccgaca actccgtcgc gaggtgcccc gcggcaaaga gcgcgctcgt
     1981 gacgacgagg gacggaccta gcggcgcccc gagcacgcgg acccgcggct gccacacgcg
     2041 gtctagctcc gtctgcaggt agccgcgata gaagcactct tcgggcaagg cgatcacgag
     2101 ccactgcccg agcacttcgt cgagcacgct tgcgaggcgc gccggcaaga acggcccggt
     2161 cggcttccag aacacgaccc agccgagcca gaacggcggc aacacgacgc acgcaaccgc
     2221 gactgcccac gcgagcgcgc ccgcgaaggc gcgcagcagg cgacgcgccg agagcggctc
     2281 cgattcgaag agccccccga gcgaaagtcc gtggcggcgc acggactcac tgtctcgtcg
     2341 caacacgagc acgtaggtcg cccccaaaaa cacgagaccc acgccggtcg cttggtacgc
     2401 gtcgggcaaa ccgtaagaga gcgccgtcac gaccgcggtc gtgacgatgg tcacggcgat
     2461 gggcgggctc gcgctacgag ctctcggggg tgcgccgggg ggcggctcgt cgctctgcgg
     2521 cagcacgttt tgcccactac tacgatccgc cgtttccatg ctgagtcgag gacttgctcg
     2581 gctcaacggc cgagcgctgc gcgcgctctc cgagactccg gcaggagtgt cggcgggcga
     2641 aacttccgcc gctgacggag cgtcgcacaa tccaagcgac gcgccgcagc actcaatcgt
     2701 ttgcactcac gcaaacggat ggtttcgcgc gtagccgtca ctgggctaag gtcgccgcac
     2761 gcgtagccat gctcgaaccc aacctgccaa attcgccggc tccgactcac gttccgactg
     2821 cattaccgca cgtcgatctg gccaagtggc cgcccgatga cgacatgccc ggtgctccgc
     2881 cgagtcccgg cattccggcc ggtggtggtt tcggtggtta cggcggcggc gacggcgact
     2941 tcaagaaagg tcgcttcaat cccgcggtga tcgtcgtcgg gatcttgatg gtggcgggtg
     3001 ctgccggctt cttgctgatc ggcgcgaaga aagacgccga gcggctcacc atcgagcaag
     3061 gtgagcaaat caagaaggac atcttcgtca aaccgaaggc cgagcagatt ccgctttggc
     3121 gcgagtgggc agcgaaggag agcagcgacg aagtgcgcgc cgaagcgctg aagcagctcg
     3181 cgtgggcgcg tgatccgcag ggcgtgccgc tcgcggcgac cgcgctcgcg tatccgtcgg
     3241 aggccgtgca gggcatggcg gcgctcgcgc tcaccgaata cggctcgccg atggcggacg
     3301 gcgcgaagga cagcttgctc gccgcgctga agacggcggg tccgggcgcc aagccgcaga
     3361 ttgcgtgggc gctcgtggtg ctcggcgaca cgcgcgcgct cgacgacgtg atgaaccttt
     3421 atcggctcgg gcacctctcg aaggtgcagc ggctcggcgg gggcatcgcg ttcaatcccg
     3481 acaagatcgt gaacctcatc ggcatcgaca agctcgcgac gatggccgac gacaagagcg
     3541 cggccgtgcg ccagctcgtg gccacggtgc tctcggccca cgcagaatcg aaatacacgg
     3601 acgtgctgat caagctcgtc aaagacagcg atcccgaggt gcagcgccaa gcggcgcccg
     3661 gtctcggcaa gatcggcgac gcgcgtgcgc gtgagccgct cgtcgctgcg ctccgaggtg
     3721 ccgataagga gacgcgcacc aagtacttcg aggcgctccg agacggcgtc ggcaccgagg
     3781 gtctcgtcgt ggcgctcgac gccgccccca ccgaagaagc acccgacgag cagaatcacc
     3841 ctggcaaggc tgcttggtat ttcaggaagc agatcctcaa catgatctac gtcttcgacg
     3901 cgacggacgc gatgaaggcg gggcagggcc tgaacgatcc gagcggcgcc gacgcgctct
     3961 acaagtacat ccagaccaat ccgcacattc acctgcagac gcacgcggcg ctcgcgctcg
     4021 cggccatcgg cgatctccgc gcagtgccga cgctcgcgaa gcgcctgcgc atggacccgc
     4081 tcaagatcta ctccgaccag aacgactggg aaatggggct caagcgcagc gacgacgagc
     4141 gcgtccagtc ggcgcgcatg atcgccgacc ttgcgatcct gcaccccgac aagctgccgc
     4201 tgattcagga gcaggcggag gacgccgtga tcttctggat ccacgagatg ccgtcgccgc
     4261 acgcgaacgg cctgcgcgca ctagcggcca tgggctcgac caaggacatc gaggcgttca
     4321 ggaagtgggc ggatcccgac gtgccgatgc cgaaggaagg ccagcagccg ccgatgcccg
     4381 aggagtgggt cgtcgcgcag agcgcgctcc gttacgtcgg ttggctcaag gatccgaagt
     4441 cgtggaagtc gctcgagaag gcgatcaagg ccaacgcgaa ggaatacgac gtcacgatgg
     4501 acggccttta ccagggcggc ctcgccatcc tcggtatgac gtaccgcgcg ctcggcgtgg
     4561 gcgccgccga cggcttctcg gagtggcgcg acaacaaagc cttcaagatg ctgatgaagt
     4621 acgtcgagaa cccgaaggag aacgagcaga gccgcatgga agcctgcgcc gcgctcgcct
     4681 gggtcgccga gaaggacgat ttcctcgagg tcgcgaagaa gatccagcag tactccggca
     4741 acgagaagcc cgacgaggtc cggcgcgcgt gcttcctcga gacgctgatt caacgcccga
     4801 tcccgggcac ggccaacgcg ctgatctcgt tgttcacgcc cgaggccgcg atcgagacgc
     4861 gccaccaggt ggcgcgcgcg ctcgccaaga gcggcttcga cgccgccgtg gagtccaagc
     4921 tcgtcgagct gctcgacaac gaggtcttga tgaacgacgc cgcgctcgcg ctcatgctgg
     4981 gcggttcgcc ggacgcagcg gcgcgcgccg ttgcgtacta cggcaaaaag ccgtggaacg
     5041 tcgccaagcc cgcgctcgat gagctcagcg acctctggta caagagcttc ggttactggt
     5101 ctacggacga cctcgaagcc ggcctgctct tcaagtacgt ggacaacgcc gaggcgatgt
     5161 cgcacgtcac catcaaccag acgccgcaag agtgggcgcg tgtcctcttg atcagccagt
     5221 tcgacaactt gctctacgac aacggcccgc actcgttcac gcgcgtcgtc ttgcgcaagc
     5281 gtctctacga catggccaag ggcagcgacg aagccaagcg cgccggtgcg atccgcacgc
     5341 tcaagttcat gaaggagcaa ggcgtgctgc tcacgctcaa gggcgaagcc ggcccggccg
     5401 gcgagcttgc gcggcaggcg tacttcgagc tcatgaaccc gaaggtcgtg accggcgtga
     5461 cggtgccgga cgacaagaag tgaacatgcg cgcgggagcg gcatgggcat gcgtgctcgg
     5521 gctggctccc gcctgcgcgg cgccgtccgc gcgcgtgccg cgctcggagg cgcccgtgct
     5581 cgagcgcgcg agcgtcacga cggcgcccga gctctgcggc aacgcgctcg acgataacgg
     5641 taacggactc gccgacgagg gctgtggcac caccacgagc gcggtctcgt tcctgatcgc
     5701 ttgggacgag ccgaatgcgg atgtggattt acgcgtggtc gacccgaacg gcgagctcgt
     5761 cgaggtggga cggccgagcg aaagcggcct cgtgcgcgaa cgggactgcc cgggacgcga
     5821 aggcgaatgt cgcggaaaga atctcgagag cgtctaccag gagcagggcg agcccgcgga
     5881 gggcaaatac gtagcgcgta ttttgctcgt ttcgctcggt ggcgccgcgg cgcccgtcgt
     5941 cgttcgcttc tccgcgcggc tcggggcgcg cgcgtacgga gccaccgtct ccctgccgcg
     6001 cgtcgattcg gactggcaga tgccgttcat gctctgacgc gcctcgccga gctcgcgcgc
     6061 attctttccg tcgtgggtgg acacaacggc gcccatgcta tgctaagagg gtccctcggc
     6121 caggaggccg cgcatgggta gtctcagccc gattcactgg ttactcgtca tcgtcgtcct
     6181 actcttggtg ttcggtccga cgcgcctagc aggcgccggc aaaggcctcg gtgaaggcat
     6241 taaagccttc aaaaaggggc tgaccgacga cgacgaaaaa cccgtcgaag aagcgaagaa
     6301 gcccgaaccg gaagcgaagg cgctcgaaaa ggcgccggag aagccggccg gcagcgcgta
     6361 gccctgccgc ggtctgcggt tcgtgtgacg gtcgtcgcgc ttacgcagcg ggcgtcttgc
     6421 gagcgcgcat ccactcgcgt gtgatctcga cgccggcggg caggatgctg atcagaatga
     6481 tcgcgatgat cacgaggtga aactgcttct tcaccacggg ttgatcggcg agggcgtagc
     6541 cggcagcggt gaggagcacg acccagccgc aggcgcccac gacgttgaac gcgagaaagc
     6601 gcgggtaacg catcttgccg atgcccgcga cgaacggcgc gaacgtccgc acgatgggca
     6661 cgaagcgcgc gatgatgatc gttttgccgc cgtagcggtc gtagaagctc tgcgtgcgat
     6721 aaagatgctt cttgttgaag agcagcgaac gttcgctcgt gaatacggcg ggcccgagct
     6781 tcgagccaat cgcgtaattg acggcgtcac cgagtacggc cgctgcgatg agtagcggaa
     6841 tcacgagata gacgttgagc ggcatgcctt cgatcgtgca gagcgcgccg acggcgaaga
     6901 gcagcgagtc cccgggcaaa aatggggtaa cgacgagccc tgtctcggcg aacacgatcg
     6961 cgaaaagcgc ggcatagagc caaggtccga gcgcgcgggc ccactcggca agatgtacgt
     7021 cgaggtgcgt aataagagaa atgatgtcca agcgctggct ccctgccggg gttccgtcta
     7081 gcatgaaact atggccgaag tcctcggtcg cgtcgttgcc ggcgatctcg agcgcccgcg
     7141 cggcccggat gcgaatcatc gcgtgcgggt gcctcggact tggctcgagc gcggggcggt
     7201 ggtcgagctc gagttgccgc gcaatttggt gtgcgcgacc tgtgacggcg gcggttgcga
     7261 tagctgcgag cgctcggggg ccgtgacgtt acgggggcgc ggggaacccg ctgatttgct
     7321 gcgggtgacg ctgcccggcg agcagtccga ggcgttcgtc attcggctgc cggaacgggg
     7381 aggcctgccg ccgctcgggt ccggcttgcc ccgcggccat ttgctcctac gcgtcgaacc
     7441 gagcgctcag gccgacgcca gtgtcgcctt ggccacgagc cttccggcgc tcggtgcgat
     7501 ccgccgcgcg ctctcggtgc ggcccgtgct cgtgcggcgc gcgcgtggcg tcttttgggc
     7561 cttcgcgatt ggtgtgcttc tgctcgcggt ctggctactc ttccggcgat gaatccgctg
     7621 ctgatgggtg cgctcctcgt cgggctatgg ggcgtcttcg cggtgagcgc cgtgcgtcgc
     7681 ttgcggttgc tcggcgcggg cgctccgacc tgggagccgc gcttcgatcg actcggccag
     7741 cggctcgccg ccgtggtgcg ctttgcgctg ctgcaagtga agatgccgaa ttacccgctc
     7801 gccgcagcgg ggcattacct gattttcttc gggttcgtcg tgctgttgct gcgcacgctc
     7861 gtgctctggg ggcgcggctt cgatccgacg tggaatctct tcgtgctcgg gccggagccg
     7921 gtgctcggcc tgccgctcgg cgaggtttat gggttcgtga aggacgtgtt cgcgctgctc
     7981 gtgctcgcgg gctcggtcat cttcgtctac ttgcgcgcga ttcggcgcga aaagcgcatg
     8041 acgctcagcg gcgagggcct ggtgattttg gggatcatca tggcgatgat gctcgccgac
     8101 ctttcttacg acggcgcgtc gctgctcttg aaccagcgtt tcgcgagcga gtgcggctcc
     8161 cggcccgccg acttctgcga cgtcgctcgt cagctcgtcg cgccgctcgg cccgccgcgc
     8221 cagggattgg gcttctttcc ggagccgggt gcgtcgctgt tcgcattcgc gtttcaaggt
     8281 ctcggcagca gcgcgctcac gtccgtcgcg cgtggcgggt tctggctgca ctcgacgttg
     8341 gtcctgatct ttctgaacat cctgccgttc acgaagcact ttcacatcat cacggcggtg
     8401 ccgaacgtct ttctgggtga tctgtcgacc cacgggcggc tccgtccgct cgcgccgaac
     8461 accgaagcac tcatgagcct ggtcgagaaa gcgacggagg ccgaagacgt gctggcagcg
     8521 cgcgtcggct acgcgcgcct cgcccatttc ccgtggaagg actatctcga cttttacacg
     8581 tgcacggagt gcgggcgctg ctccgacaat tgcccagcct tcatcacggg caagctgctc
     8641 tcgcccaagc agttcacgct cgatttgcgc gatcagctgt acggtcgtgg caccgcgccc
     8701 aaagacctcg ttcccgacgt gatcaaaccc gaagtgctgt gggcctgcac gacgtgccgg
     8761 gcctgcgaag agcagtgtcc cgtcaacatc acctacgtcg acaaaatcgt gcagatgcgg
     8821 cgcaatctcg tcacgattcg cggcgagttc ccgaccgagc tccaaaagcc gttcacgggc
     8881 atggagacga acggtaatcc ctg
//
LOCUS       DATIML010000113         5379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4932100, whole genome shotgun sequence.
ACCESSION   DATIML010000113 DATIML010000000
VERSION     DATIML010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5379
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4932100"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..846
                     /locus_tag="VLJ38_01895"
     CDS             <1..846
                     /locus_tag="VLJ38_01895"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU38279.1"
                     /translation="VLVINDGSTDRTVEVAKSLGVAHVVGFPRNQGLARTFMLGIRSC
                     LELGADIIVNTDADNQYNADDIPALITPILERRADIVIGARPIATIEHFSPIKKLLQK
                     LGSAVVKRVSGTSVADAPSGFRAFSREAAASLNVFSAYTYTLETIIQAGQKNMSVVSV
                     PIRVNGDLRPSRLVRSITSYVRRSIMTMLRIGIIYRPFQFFMALASTLFLAGIVLGLR
                     FLYYYVFEHGIGHVQSVILAAVFMIFGFQTGLLAFIADLQSVNRRLLEELLEAKRVVR
                     RRDDE"
     gene            839..1759
                     /locus_tag="VLJ38_01900"
     CDS             839..1759
                     /locus_tag="VLJ38_01900"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HSU38280.1"
                     /translation="MSESPRVRATAWALAFALALSAGTARAFSYVVAPGDTLASIAER
                     YYGRIQQERLLVAANFLDARRGTPIVPGMRLEVPALGHHRIVRGETWETLAAELLGSP
                     SRADALSAANGSSPWLAPEDGSEIAVPYNLRVVIGEKEDLTTIAYRHLGDMNKAWTLD
                     HYNGLGGKKPLEGDVLLVPISDLTLTEAGRKAAAAAAAIECTEAGGAARKTQQHIAQE
                     LPALVADVRAGRYAEAVTRGVRFVASGALTEPQRALVEQKLTEAYVALDAPGLAAAAC
                     SEWRKRDRAVHLDPTVVSPKIIAACERATP"
     gene            1756..2658
                     /locus_tag="VLJ38_01905"
     CDS             1756..2658
                     /locus_tag="VLJ38_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSU38281.1"
                     /translation="MTARFDQELDWGALAPLRLRARSAAEGLWAGPHRSLRRGAGVEF
                     AGYRAYTPGDDLRFLDRHALMRHGLRVVREFETDTDRSVRLVLDVTASMGFAGSRARG
                     AKLAFAAVVGAALAWIALRGGDRAALEFIGDHGLPLPWGTGMPTFERLVSALEHARAG
                     GGVSPERLTQLATRLGRNSPAGSITVVFSDFLDLPPNALDELGALSGRQRALVAVEVL
                     DPDELDLPFKGPVRLRALESDLVVDTDAPRARADYEAALAEHAAKWREGFVARGARFL
                     RASTGEDPGAVVRRVLEGISGAGA"
     gene            2655..4592
                     /locus_tag="VLJ38_01910"
     CDS             2655..4592
                     /locus_tag="VLJ38_01910"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA and WFA domain-containing protein"
                     /protein_id="HSU38282.1"
                     /translation="MNFLVGAALAVGMLVVLPLVAHFLRRGRAAELPFPPAALVKATQ
                     TSARRERHLEDRTLFSLRALAIVALAVLGATPLVRCSRLSLARGAGGSLAVAIVLDDS
                     LSMRAAPKGKPSRFEQARDAAARLLDSTREGDSVAILLAGAPARVALAATTDLAVARR
                     TLKELAPSDRATDLAGAVSLARSSFASGAQRERRLVVLSDFAAPAVPAGDPAPWLPLP
                     ALAERLPDCGIASAERRGTSVAATLACTDAEAARGRTLELVASGRSVGKLAVEARGGV
                     ASVSLAVPPSAASALTLRLDGEDALAEDDTAPVAPDTVGLGVAVLADQTEGGAVTGGA
                     PLVEQVIGALERDVTLHPLTVVPDQASELEHDALVLLDDPAGLGPEAREALTTFVERG
                     GLAAALVGPRAEARRIGATLEPFAFGTVRWQPIPAARGANVASLGWLGPEARSLGELK
                     PQGRTLLDAGHAPGARVTATWSDGAPFIVERELGRGLVTTITLPSSVEVSDFALRPGF
                     VALIDHLLDTARRRRGLTTSVAGTTWVFGSERPVIVGPDGPLRLVESPDRGRTATPSL
                     RGSYRLTTERGDELRTVTLDPQEITLEPSPPPRGTSNAGGAPSGQLLDVSAEVAYALL
                     ALLALELLLRAVRVDARPGFR"
     gene            4606..5184
                     /locus_tag="VLJ38_01915"
     CDS             4606..5184
                     /locus_tag="VLJ38_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38283.1"
                     /translation="MPAPWRKSPRALRSFARAILAACLALSGCHAAGPYGFSRTYSPL
                     SEEKSAARGAKEYDPVMIEREPASWKGQPVSIFGVVKQRGQAPGGMAYLTLSVRTLAT
                     RNLCDQMDEDTCRVTVTDHEFAVIHASVKLRAADDIGKESLAPGSLVRVIGKLTDDVD
                     KTDGMQVMQATYYRHWPRNYFVTMADRDHMRL"
BASE COUNT          773 a         1962 c         1856 g          788 t
ORIGIN      
        1 gtcctcgtca tcaacgacgg cagcaccgat cgcacggtcg aggtcgccaa atcgctcggc
       61 gtggcgcatg tggtcggctt tcctcgtaac cagggcctcg cgcgcacttt catgctcggc
      121 atccgctcgt gcctcgagct cggcgccgac atcatcgtca acacggatgc cgacaaccag
      181 tacaacgccg acgacatccc cgcgctcatc acgccgatcc tcgagcgccg cgcggacatc
      241 gtgatcggcg cgcgcccgat cgcgaccatc gagcacttct cccccatcaa gaagctcttg
      301 caaaagctcg gcagcgccgt cgtcaagcgc gtgagcggca cgagcgtggc ggacgcgccg
      361 agcggctttc gcgccttctc gcgcgaagct gccgcgagcc tgaacgtctt cagcgcctac
      421 acctacacgc tcgagacgat cattcaggcg gggcaaaaga acatgagcgt cgtgtccgta
      481 ccgatccgcg tgaacggcga tctgcggccg tcgcgcctcg tgcggagcat cacctcttac
      541 gtgcggcgct cgatcatgac gatgctgcgc atcggcatca tttaccggcc gtttcagttt
      601 ttcatggcgc tcgcgagcac gctgtttctc gcgggcatcg tgctcgggct gcgctttctc
      661 tattactacg tgttcgagca cggcatcggt cacgtccagt cggtgatcct cgcggccgtg
      721 ttcatgatct tcgggtttca aacgggcctg ctcgcgttca tcgccgacct gcagtcggtc
      781 aatcgccgtt tgctcgagga gctgctcgag gccaagcgtg tggtgcggag aagggacgat
      841 gagtgagtcg cctcgcgtgc gcgcgacagc gtgggcgctc gcgttcgcgc tcgcgctctc
      901 ggccgggacg gcgcgtgcgt tcagctacgt cgtggcgccg ggcgacacgc tcgcttcgat
      961 cgccgaacgc tactacggcc gcatccaaca agagcgcctg ctcgtcgcag cgaacttcct
     1021 cgacgcgcgc cgcggcacgc ccatcgtgcc cggcatgcgg ctcgaagtgc ccgcgctcgg
     1081 tcaccatcgc atcgtgcgcg gcgaaacgtg ggagacgctc gccgccgagc tcctgggctc
     1141 accctcccgg gcggacgctc tgagcgccgc caacggctcg agtccgtggc tcgcgcccga
     1201 ggacggctcc gaaatcgccg tcccctacaa tttgcgtgtc gtcatcggtg aaaaggaaga
     1261 cctcacgacc atcgcctacc gacacctcgg cgacatgaac aaggcctgga cgctcgacca
     1321 ctacaacggc ctcggaggca aaaagccgct cgaaggcgac gtgctgctcg tgccgatcag
     1381 cgatttgacg ctgacggagg cggggcgcaa agcggcggcg gcggccgccg cgatcgagtg
     1441 cacggaggca ggcggcgcag cacgcaaaac ccagcagcac atcgcgcaag agctgccggc
     1501 gctcgtcgcc gacgtgcgcg cgggacgcta cgccgaggcc gtgacgcgcg gcgtgcgctt
     1561 cgtggcgagc ggcgcgctca cggagccgca gcgcgcgctc gtggaacaga agctcacgga
     1621 agcgtacgtc gcgctcgacg cgcctggact cgccgccgcg gcgtgcagcg agtggcgcaa
     1681 gcgcgaccgc gcagtacacc tcgatcccac cgtggtcagc ccgaaaatca tcgcggcgtg
     1741 cgaacgcgcg acgccgtgac agcgcgtttc gaccaggagc tcgattgggg cgcgctcgcg
     1801 ccgctccggc tgcgcgcgcg cagcgccgcc gaggggctct gggcaggacc gcaccggagc
     1861 ctgcggcgtg gcgctggcgt cgagtttgcg ggctaccgcg cctacacgcc aggcgacgac
     1921 ttacgcttcc tcgatcgcca cgcgctcatg cgccacggct tgcgcgtcgt gcgcgagttc
     1981 gagaccgaca ccgatcgcag cgtgcgcctc gtgctcgacg tgacggcttc gatgggcttc
     2041 gccggctctc gcgcgcgcgg cgccaagctc gcgttcgccg ccgtcgtcgg cgcggcactc
     2101 gcttggatcg ccctgcgcgg cggcgatcgc gcggcgctcg agttcatcgg cgatcacggg
     2161 ctgccgctgc cctggggcac gggcatgccg acgttcgagc ggctggtgag cgcgctcgag
     2221 cacgcacgcg cgggcggggg cgtgagcccg gagcggctga cgcagctcgc gacgcggctc
     2281 ggccggaact cgccggctgg ctcgatcacc gtcgtgttca gcgatttttt ggacttgccg
     2341 cccaacgcgc tcgacgagct cggcgcgctc tcgggccggc agcgcgccct cgtcgccgtc
     2401 gaggtgctcg atccggacga gctcgatctg ccgttcaagg ggccggtgcg gctcagggcg
     2461 ctcgagtcgg acctcgtggt cgataccgac gcgccgcgcg cacgcgccga ttacgaagcc
     2521 gcgctcgccg agcacgccgc gaagtggcgt gaggggttcg tggcccgcgg cgcgcggttt
     2581 ctgcgcgcct cgaccggcga ggacccgggc gcggtcgtgc ggcgggtgct cgaaggcatc
     2641 agcggagccg gcgcttgaac ttcctcgtcg gggcggcgct cgccgtcggg atgctcgtgg
     2701 tgctgccgct cgtcgcgcat ttcctgcgcc gcggccgcgc cgccgagctg ccgtttccgc
     2761 ccgccgcgct cgtcaaagcc acgcagacgt cggcgcgccg cgaacgtcac ctcgaggatc
     2821 gcacgctctt ttcgctgcgc gcgctcgcga tcgtggcgct cgccgtgctc ggcgcgacgc
     2881 cgctcgtgcg ctgctcgcga ctttcgctcg cgcgcggcgc cggcgggtcg ctcgccgtgg
     2941 cgatcgtgct ggacgactcg ctcagcatgc gcgcggcacc gaagggcaag ccgtcccgct
     3001 tcgagcaagc tcgcgacgcg gcggcgcgct tgctcgactc cacgcgcgag ggcgactccg
     3061 tcgcgatcct gctcgccggc gcgcccgcgc gtgtcgcgct cgccgccacg accgatctcg
     3121 ccgtggcccg ccgcacgctg aaggagctcg cgccgagcga ccgcgcgacc gatctcgccg
     3181 gcgccgtttc gctcgcccgc tcgagcttcg cgagcggcgc ccagcgcgag cggcgcctgg
     3241 tcgtgctgag cgattttgcg gcgcccgccg tgcccgcggg cgatccggcg ccatggctgc
     3301 cgctgcctgc gctcgccgag cggctgcccg actgcgggat cgcgtccgcc gagcggcgtg
     3361 ggacgagcgt cgccgccacg ctcgcgtgca cggacgccga ggccgcgcgt ggccgcacgc
     3421 tcgagctcgt cgcgagcggc aggagcgtcg gcaagctcgc cgtcgaagcg cgcggcggcg
     3481 tcgcaagcgt ctcgctcgcc gtgccgccct cggccgcttc cgcgctcacg ctgcgcctcg
     3541 acggcgagga cgcgctcgcg gaagacgata cggcgcccgt cgcgccggac acggtcgggc
     3601 tcggcgtcgc cgtgctcgcc gaccaaacgg agggcggcgc cgtcacgggc ggcgcgccgc
     3661 tcgtcgaaca agtcatcggg gcgctcgagc gtgacgtgac gctgcatccg ctcacggtcg
     3721 tgcccgacca agcctccgaa ctcgaacacg acgcgctcgt cttgctcgac gatcccgccg
     3781 gcctcggccc cgaggcgcgc gaagcgctga cgacgttcgt cgagcgcggc ggcttggccg
     3841 cggcgctcgt gggaccgcgc gccgaggcgc ggcgcatcgg cgcgacgctc gaacccttcg
     3901 cgttcggcac ggtgcgctgg cagccgatac ccgcggcgcg cggagcgaac gtcgcctcgc
     3961 tcggctggct cggccccgaa gcgcgcagct tgggcgagct caagccgcag gggcgcacgc
     4021 tgctcgacgc ggggcacgcg ccgggcgctc gcgtcaccgc gacgtggagc gacggcgcgc
     4081 cgttcatcgt cgaacgcgag ctcggccgcg ggctcgtgac gaccatcacg ctcccgagct
     4141 cggtcgaggt gagcgacttc gcgctccggc cgggcttcgt cgcgctcatc gatcacttgc
     4201 tcgacacggc gcgccgcagg cgcggcctca cgacgagcgt cgccggcacg acctgggtgt
     4261 tcggcagcga gcgcccggtg atcgtcggac cggacggccc gctccggctc gtcgagtccc
     4321 cggaccgcgg ccgcacggcg acgccgtcgc tccgtggcag ctaccggctc accaccgagc
     4381 ggggtgacga gctccgaacc gtgacgctcg acccccaaga gatcacgctc gaaccttccc
     4441 cacccccgcg cggcacgagc aacgccggcg gcgcgccctc gggccagctc ctcgacgttt
     4501 cggccgaggt cgcctacgcc ctgctcgccc tgctcgccct cgagctcctg ctgcgagcgg
     4561 tccgagtcga cgcccggccc gggttccgct aacacccgga gccccatgcc ggcgccctgg
     4621 cgcaaaagtc cgcgagccct tcgctccttc gctcgagcca tcctggcggc gtgcctcgcg
     4681 ctcagcgggt gccacgccgc gggtccgtac ggcttcagcc ggacgtattc gccgctctcc
     4741 gaagagaaga gcgcggcgcg gggcgccaaa gagtacgacc cggtcatgat cgagcgcgag
     4801 ccggcgagct ggaaggggca gccggtgagt attttcgggg tggtgaagca gcgtggccag
     4861 gcgccgggcg gcatggctta cttgacgctc agcgtgcgca cgctcgccac gcgaaacctc
     4921 tgcgaccaaa tggacgaaga cacctgccgc gtgaccgtga ccgatcacga gttcgccgtg
     4981 attcacgcga gcgtgaagct ccgcgcggcc gacgacatcg gcaaagagag cctcgcgccg
     5041 ggttcgctcg tgcgcgtcat cggcaagctg accgatgacg tcgacaagac ggacggcatg
     5101 caggtgatgc aggcgactta ttaccggcac tggccgcgca actacttcgt cacgatggcc
     5161 gatcgcgacc acatgaggct ctaacaaggc atatgagtct tggaagaaca gatcacgatc
     5221 gtcgcgagcg gcgacgagcc aacgcgacta accggcgagg ccggcgccag ggccgtccct
     5281 cgaaggtgtt gacgacctta cgccgaagaa aaaccgtgaa aaagccagca acaagactcg
     5341 acctgtgcca gcgcgaaacg gctcgtcaag gattctaaa
//
LOCUS       DATIML010000114         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3488490, whole genome shotgun sequence.
ACCESSION   DATIML010000114 DATIML010000000
VERSION     DATIML010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3488490"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1252
                     /locus_tag="VLJ38_01920"
     CDS             <1..1252
                     /locus_tag="VLJ38_01920"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HSU38284.1"
                     /translation="KARLLGFAHFADFVTDDRMAKTGAEAQKFVDDLAARTEAAFARE
                     KQELLDFRRGLEGPAAPELAPWDVAYYSEKLKRERYSFDDEALRPYFALESVLGGAFR
                     LAEQLFGVQIVPAEGVSVWHESVRAFYLDDQKGDRLGLFYVDPYPRESKRPGAWMHGL
                     IAAVPPAPNLAVFCANVMPPVGGKPSLLTHRDVETIFHEFGHLLHHCLSTVSVRSLAG
                     TRVVQDFVELPSQIMENWCTEREGLNLFARHFETAAPIPDALLDRLRAARTFRAASQQ
                     MRQLGFAAVDLALHMSFDPETDGDPIAYGNRILQRYASAALPADYGMLASFGHLFAHP
                     VGYAAGYYSYKWAEVLDADAFDRFRREGMLNPAVGADFRDRLLSRGDSRDPMDLFVSF
                     VGHRPQVDALLTRQGLSTSAGGPG"
     gene            1252..>1694
                     /locus_tag="VLJ38_01925"
     CDS             1252..>1694
                     /locus_tag="VLJ38_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38285.1"
                     /translation="MRLGGVAILSGAAVGVVIALAFRGASPPEPSGSASRDSAALASA
                     SSPVTAPVASASSTPPLASDPEPAATHAAPPLPSMTAPVPAESASASAPPPATSAEPF
                     PVATPLPPVTSVKELQRAEIRCYEVDPEECGRAADAYDGGQLVPR"
BASE COUNT          243 a          615 c          562 g          274 t
ORIGIN      
        1 gaaggcgcgg ctgctcggat tcgcgcactt cgccgatttc gttaccgacg accgcatggc
       61 gaaaaccggc gccgaagccc aaaaattcgt cgacgatctg gccgcgcgca ccgaggcggc
      121 cttcgcgcgc gaaaagcagg agctactcga tttccggcgc gggctcgaag gaccggccgc
      181 gcccgagctc gcgccctggg acgtggctta ctactccgag aagctgaagc gcgagcgcta
      241 ctcgttcgat gacgaagcgc tccggcctta cttcgcgctc gagagcgtgc tcggcggagc
      301 gttccggctc gcggagcagc tcttcggcgt gcaaatcgtg ccggccgaag gtgtgagcgt
      361 gtggcacgag agcgtgcgcg ccttttacct cgatgaccaa aagggcgacc ggctcgggct
      421 cttctacgtc gatccgtatc cgcgcgagtc gaaacgtcca ggcgcgtgga tgcacgggct
      481 catcgcggcc gtaccacccg cgccgaactt ggcggtgttt tgcgccaacg tgatgccgcc
      541 cgtgggcggc aagccgtctc tgctcacgca ccgcgacgtc gagacgatct tccacgagtt
      601 cgggcatctg ctgcaccact gcctgagcac cgtgtcggtg cgcagtctcg ccggcacgcg
      661 cgtcgtgcag gatttcgtcg agctcccctc gcaaatcatg gagaattggt gcacggaacg
      721 cgaaggtttg aacctcttcg cgcgccattt cgagacggcc gcgccgatcc cggacgcgct
      781 gctcgaccgc ctgcgcgcgg cgcgcacctt ccgcgcagcg agccagcaga tgcgccagct
      841 cggcttcgcg gcggtcgacc tcgcgctgca catgagcttc gaccccgaaa cggacggcga
      901 tccgatcgct tacggcaacc gcatcctcca gcgctacgcc tccgcagcgc tgcccgccga
      961 ttacggcatg ctcgcaagct tcggtcactt gttcgcgcac ccggtcggct atgcggcggg
     1021 ctactactcg tacaagtggg ccgaggtgct cgacgccgac gccttcgacc gcttccggcg
     1081 tgagggcatg ctcaatcccg cggtcggcgc cgatttccgc gaccggctgc tgtcgcgcgg
     1141 cgatagccgc gatcccatgg acctcttcgt gagcttcgtc ggccatcgac ctcaggtgga
     1201 cgcgctgctc actcgccagg ggctcagcac gagcgccggg gggccgggct gatgcgcttg
     1261 ggcggcgtcg ccatcctgtc cggcgccgcg gtgggtgtgg tcatcgcact cgcgttccgc
     1321 ggcgcgtcgc cgcccgaacc gagcgggagc gcgtcacggg atagcgcggc gctggcttcg
     1381 gcgagctcgc cggtcaccgc gcccgtggcg tccgcgtcgt cgactccgcc gctcgcgtcc
     1441 gaccctgagc cggcggccac gcacgcggcg cccccattgc cgtccatgac cgcgccggtc
     1501 ccagccgagt cagcgtccgc gagcgcgccg ccgcccgcga cctcggccga gcccttcccc
     1561 gtcgctaccc cgttgccgcc cgtcacgagc gtgaaggagc tacagcgcgc cgaaatccgt
     1621 tgttatgagg tggatcccga ggagtgcggc cgcgccgccg acgcgtacga cggcggacag
     1681 ctcgttcccc gcga
//
LOCUS       DATIML010000115         6413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_889653, whole genome shotgun sequence.
ACCESSION   DATIML010000115 DATIML010000000
VERSION     DATIML010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6413
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889653"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VLJ38_01930"
     CDS             complement(<1..292)
                     /locus_tag="VLJ38_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38286.1"
                     /translation="MASLTTDVICVIDVETRHFLEVNAAFAQAFGCTVAEARQLRFED
                     VFRSGEVSVFALLAELERRRSLHAGVLPCRGRDDRALQFATRLSVAEIEGRRV"
     gene            complement(516..2081)
                     /gene="ahpF"
                     /locus_tag="VLJ38_01935"
     CDS             complement(516..2081)
                     /gene="ahpF"
                     /locus_tag="VLJ38_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016668 - oxidoreductase activity, acting
                     on a sulfur group of donors, NAD(P) as acceptor [Evidence
                     IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009398 - FMN biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HSU38287.1"
                     /translation="MLDDDLKVQLRSYLDLLKHPVVLTAALDESAASDELRSLLRDLE
                     EASPLVRVEQLAEDAGEVRRPSFAVHLPGEAPRVRFAGLPLGHEFTSLVLALLHVSGH
                     PPKVSDEALKQIEGLQGPLHFVTYFSQSCQNCPDVVQALNLIAARNPDVTHTAVDGAL
                     FRAEVEERQVLAVPTLYLNGERLGQGRMELEELLAKIDRGDEQRRVAKLNHKEPFDML
                     IVGGGPAGAAAAIYAARKGLRTGIVAERFGGQVMDTLAIENFISVSETDGPKLATALE
                     QHVRAYPVDLIKHERAKKLVPGALHRLELESGAELSAKTVIIATGARWRDMNVPGESE
                     YRTRGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGVVAHVTLLEFMPALKADD
                     ILQRKLRSLINVEIVTNARTTEVLGDGRQVTGLRYEDRVTGELKDLTVAGIFVQIGLL
                     PNTDFLKGTVELNRFGEIVVDHHGRTSVPGVFAAGDATTVPFKQIIIATGDGAKAALG
                     AFDYLIRATAPAA"
     gene            complement(2178..2750)
                     /gene="ahpC"
                     /locus_tag="VLJ38_01940"
     CDS             complement(2178..2750)
                     /gene="ahpC"
                     /locus_tag="VLJ38_01940"
                     /EC_number="1.11.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0102039 - NADH-dependent peroxiredoxin
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HSU38288.1"
                     /translation="MSLINTQIKPFKATAYQNGKFFDVSNENLRGKWSVFFFYPADFT
                     FVCPTELEDLADHYEEFKKIGVEVYGVSTDTHFAHKAWQDVSEAIKKVKYPLLGDPST
                     TLSRNFEVLITEGGDAGLALRGTFLVNPQGEIKLYEVHDNGIGRDAKELLRKVKAAQY
                     VASHPGEVCPAKWTEGQKTLKPGLDLVGKI"
     gene            2893..3855
                     /locus_tag="VLJ38_01945"
     CDS             2893..3855
                     /locus_tag="VLJ38_01945"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSU38289.1"
                     /translation="MDLSQVTLTQMRYAVEIEQSGSFRLAASAAHVSQSGLSMQIQKL
                     EDLLGTVLFDRSKKPVLLTPAGAAALAQMRTILRETERLGQIVVDGGEPGGRYRLGVI
                     PTLSPTVIPLFLGPFSRAYPRVELVVEELRTAEIITRLRADTLDAGLLSTPLGVPGIS
                     EKVLGLEGMVAYLPPGDPLASHHEIAQSELADRALWVMPEGHCFRSQVLSYCRPRKPE
                     GATGIRFESGSFQTLVKLVDDGLGATVLPDLVVRELAASRRKAQVRPLVSPAPVREIG
                     LVTARSDLRRSVTDVLEASIRAALAEVLTPTPKRARRLDPMSVE"
     gene            4036..5244
                     /locus_tag="VLJ38_01950"
     CDS             4036..5244
                     /locus_tag="VLJ38_01950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38290.1"
                     /translation="MRTSLTLLALSVILVAACDGNSQRADHSENGGSGATTGGSGVTP
                     GGAPSAAAGTSSSSGGVASGVGGATGGAPSTAGSATGGSPGGGAGAASNPGGAPASGG
                     YGAAGSSGAAPGASGGTNGGSSGALGTGGATSGTAGAAGTAGGTGGSSGEGACSRELL
                     KSTVSAYFTALAAHDASPLPLADNVKFTENAQVLTLGKGLWLTAGAVKGSFSAYDTDT
                     CNAATQAVVPDGSMDIPFSLRIKLEARKITEIETIAVRPGDYKVSGSSFASDTKALLM
                     SIDSVHWEDPVPAGMQNTRDEITAWVDKYFRDFPNGVCNTTSSCKRLENGGGSFSCSA
                     GASCMMGAPSGKPAITPRLILVDTETGLGVGYDLFEGADDDTHLFKMYGGQVYGVSAI
                     LGAATSTGWE"
     gene            complement(5251..5559)
                     /locus_tag="VLJ38_01955"
     CDS             complement(5251..5559)
                     /locus_tag="VLJ38_01955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38291.1"
                     /translation="MSIASIARSSFVVLGILSSSALAFARQPPAVVQAHERADDALCQ
                     GAPVVAGPGYRDMRVRFGGSNVESAVAVQTGRGYRDALVRFGAQHMTQVAVCEGRSKL
                     "
     gene            6075..>6413
                     /locus_tag="VLJ38_01960"
     CDS             6075..>6413
                     /locus_tag="VLJ38_01960"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSU38292.1"
                     /translation="MTIAETDIGRPRSRRRRGATSRAEVVAAALAVADSVGLDGFTIR
                     AVARFASVPTMSLYTHFTSKEELLDLMHAEVVLRLYADDEYSSWQLGVLALCNRIRST
                     LIAHPHWVPLL"
BASE COUNT         1045 a         2094 c         2167 g         1107 t
ORIGIN      
        1 aaacacgcct gccttcgatt tccgcgacgc tcaggcgcgt cgcgaactgc agcgctcggt
       61 cgtctctgcc gcggcacggc agcacccctg catgcaagct gcgacgccgc tcgagctcgg
      121 cgagcaaagc gaagacagag acctcgccgc ttcgaaagac gtcttcgaag cgcaattgcc
      181 gagcctccgc gaccgtgcaa ccgaaagcct gcgcgaaggc ggcgttcacc tcgaggaaat
      241 gcctcgtctc gacgtcgatc acgcagatga cgtccgtcgt caacgacgcc actgcggcgc
      301 ccaaccaccg gtgcgaccct gcgctcatcg ccgcacagcc tacgcgattg gcgcgctcgc
      361 tgctggctta cggcggcgag ggccgcgctc cctcacattt tcgcagtctg gttcagcgct
      421 gccgtcccgg aatgggacca cgcgagttcg agctgggagt ccgccgtgtg ccgcattgtc
      481 ggcaggtcac aaatttgaag cgttccacgg tcgtgtcagg cggcgggtgc ggtcgcgcgg
      541 atcaggtaat cgaatgcgcc gagcgcggct ttggctccgt cgccggttgc gatgatgatc
      601 tgcttgaacg ggacggtcgt cgcgtcgccg gccgcgaaga cgcccggaac gctcgtgcgg
      661 ccgtgatgat cgaccacgat ttcgccgaag cgattgagct cgaccgtgcc cttgaggaaa
      721 tccgtgttcg gcagcaggcc gatttgcacg aaaatgcccg cgacggtgag gtctttgagc
      781 tcgcccgtga cgcgatcttc gtagcgcagc cccgtgactt ggcgtccgtc gccgagcacc
      841 tcggtcgtgc gcgcgttcgt gacgatctcg acgttgatga ggctccggag cttgcgctgt
      901 aggatgtcgt cggctttgag cgcgggcatg aactcgagca acgtcacgtg ggcgacgacg
      961 cccgcgagat cgatcgccgc ctcgacgccg gagttgccgc ccccgatcac cgcgacgcgc
     1021 ttgcccttga agagcgggcc gtcgcagtgg ggacagtacg tcaccccgcg cgtccgatac
     1081 tcgctttcac ccggcacgtt catgtcgcgc cagcgagcgc ccgtcgcgat gatgacggtc
     1141 ttggcggaga gctcggcgcc gctctcgagc tcgaggcggt ggagcgcgcc gggcacgagt
     1201 ttcttcgcgc gctcgtgctt gatgaggtcg accggatacg cgcgcacgtg ctgctcgagc
     1261 gccgtcgcca acttcgggcc gtccgtctcc gagacggaga tgaaattctc gatcgcgagc
     1321 gtgtccatca cctgtccgcc gaagcgctcg gcgacgatgc ccgtgcgcag gcccttgcgc
     1381 gcggcataaa ttgccgctgc ggcgcccgcc ggcccgccgc ccacgatcag catgtcgaac
     1441 ggctccttgt ggttcagctt cgccacacgt cgctgctcgt cgccacggtc gatcttggcg
     1501 agcagctcct cgagctccat gcgtccttgt ccgagccgct cgccgttcag gtagagcgtc
     1561 ggcaccgcca gcacctgccg ctcttcgact tcggcgcgga agagcgcgcc gtcgacggcc
     1621 gtgtgcgtca cgtccgggtt acgcgccgcg atcaggttca gggcctgcac gacgtcgggg
     1681 cagttttggc acgactgcga aaaatacgtg acgaagtgca gcggaccctg gagcccttcg
     1741 atttgcttca gtgcctcgtc gctcaccttc ggcggatggc cgctcacgtg caagagcgcg
     1801 agcacgagcg aagtgaactc gtgcccgagc ggaagcccgg cgaagcgcac gcgcggcgcc
     1861 tctcccggca ggtgcacggc gaagctcggc cggcgcactt cgccggcgtc ctcggcgagc
     1921 tgctcgacgc gcacgagcgg cgaggcttcc tcgagatcgc ggagcagcga gcggagctcg
     1981 tccgatgccg cgctttcgtc gagcgcggcc gtcagcacca cggggtgctt cagcagatcg
     2041 agatacgagc ggagctgaac cttcaaatcg tcgtcgagca tgagatcctc gcgaaaacag
     2101 ccagtttgga cgagcgcgcg ggacaatcgg ctgaccgccg gccgcgcgct ccgtcccttt
     2161 cgattcgaag ctcgacttca gatcttgccg accagatcca agccgggctt gagcgtcttt
     2221 tgtccctcgg tccacttcgc ggggcacacc tcgcccggat gcgaagcgac gtattgcgcc
     2281 gccttcacct tgcgcaggag ctccttggcg tcgcggccga tgccgttgtc gtggacctcg
     2341 tagagtttga tttcgccctg cgggttgacc aggaacgtgc cgcgcagagc gaggccagca
     2401 tcgccgccct cggtgatgag cacctcgaag ttgcgcgaga gcgtcgtcga cggatcgccg
     2461 agcagcgggt acttcacctt cttgatcgct tcggatacgt cctgccacgc cttgtgcgcg
     2521 aagtgcgtat cggtcgagac gccgtagacc tcgacgccga tcttcttgaa ttcctcgtag
     2581 tggtcggcga gatcctcgag ctcggtcggg cacacgaacg tgaagtccgc ggggtagaag
     2641 aagaacacgc tccacttacc gcgcaggttc tcgttcgaaa cgtcgaagaa cttcccgttc
     2701 tggtaggccg tggctttgaa cggcttgatc tgagtattga tgagcgacat gaatcgagtc
     2761 tccttagggt ttcttcggct gagcggcgcg ctcggcgtcc gctcacgtcg gtgaatgtag
     2821 gcgcaagacc ccacccaatc caatcgaacg ttttgtagac gggttcagaa aaagtgatag
     2881 ttcagaggcg ccatggacct gtcacaagtc acgctgaccc agatgcgcta tgccgtagaa
     2941 atcgaacaat ctgggagctt taggctggcc gcgagcgccg cccacgtgtc gcaatccggc
     3001 ctcagcatgc aaatccaaaa gctcgaggac ctgctcggca cggtcctctt cgatcgcagc
     3061 aagaagcccg tcctgctcac gccggccggc gccgcggcgc tcgctcagat gcgcaccatc
     3121 ctgcgcgaga ccgaacgcct cggacaaatc gtcgtggacg gcggcgagcc cggcggtcgt
     3181 taccggctcg gcgtgatccc gacgctttct ccgacggtga tcccgctctt cctcggtccc
     3241 ttctcgcgcg cttatccgcg cgtcgagctc gtcgtcgaag agctccggac ggcggagatc
     3301 atcacgcgcc tgcgcgccga cacgctcgac gcggggctgc tctcgacgcc cctcggcgtg
     3361 cccggcatca gcgagaaggt gctcgggcta gaaggcatgg tcgcgtactt gccgcccggt
     3421 gatccgctcg cgagccatca cgaaatcgcc cagtccgagc tcgccgatcg cgcgctgtgg
     3481 gtcatgcccg agggccattg cttccgcagt caggtgctct cgtattgccg tccgcgcaag
     3541 cccgaaggcg cgaccgggat ccgcttcgag agcggaagct tccagacgct cgtcaagctc
     3601 gtggacgacg gactcggcgc gacggtgctg ccggatctgg tcgtgcgcga gctcgccgcc
     3661 agccggcgca aggctcaagt gcgtccgctc gtctcgcccg cgcccgtgcg cgagatcggt
     3721 ctcgtcacgg cgcgctccga cttgcggcgc agcgtgacgg acgtgctcga agcgagcatc
     3781 cgcgccgccc tcgcggaagt gctcactccg actccgaaac gagcgcgacg tctggatccg
     3841 atgagcgtcg agtagcgtaa ttttatggat gggagtgtga atccgtcgca ctcctctgcg
     3901 caaagtttcg gcttgtgcgc aatccgctcc ggttgcgtcg caaaccgcca cggacgggct
     3961 gaaatcagcg ttcctttcgc gccgggcgcg ctggacaggc aacgtgtttg ggggaaggct
     4021 tggccctgag ttgcgatgcg gacttcactg acgctgctgg cgctctccgt cattttggtt
     4081 gccgcgtgtg atggtaattc gcagcgggcg gaccactcgg agaatggcgg ctccggcgcg
     4141 acgacgggcg gctccggcgt gacaccaggc ggcgcgccga gcgctgctgc aggcacttca
     4201 tcgagtagcg gtggagtcgc gagcggcgtc ggtggagcga ccggcggggc tccgagcacg
     4261 gctgggtcgg cgacgggcgg ctcgccgggt ggtggcgcgg gcgcagcgag caatcctggg
     4321 ggtgcgccag ccagcggtgg gtacggcgcc gctggcagca gtggcgccgc ccccggcgca
     4381 agtggcggaa cgaacggcgg ctcgagcggt gcgctcggca ccggtggcgc gacgagcggg
     4441 actgctggcg cggcggggac ggctggcggt acgggcgggt cgagcggcga gggggcgtgt
     4501 tcgcgcgagc tcttgaagag caccgtgagc gcgtacttta cggcgctcgc cgcgcacgac
     4561 gcgtccccgt tgccgctggc cgacaacgtc aagttcaccg aaaacgccca ggtgctcacg
     4621 ctcggcaagg ggctgtggct gacggccggc gccgtcaaag gctcgttcag cgcctacgac
     4681 accgacactt gcaacgcagc gacgcaggcg gtcgtgccgg acggaagcat ggacattccg
     4741 ttctcgctcc gcatcaaact cgaagctcga aagatcacgg agatcgagac catcgccgtg
     4801 cggcccggcg actacaaggt gagcggctcg tctttcgcct ccgacacgaa ggcgctcctc
     4861 atgagcatcg acagcgtgca ctgggaggac ccggtccctg ccggcatgca gaacacgcgt
     4921 gacgagatca cggcctgggt cgacaaatac ttccgcgatt tcccgaacgg agtttgcaat
     4981 acgacgagca gctgcaagcg gctcgagaac ggcggcggct ctttctcgtg cagcgcgggc
     5041 gccagctgca tgatgggcgc gccgtcgggc aagcccgcga tcacgccgcg cctgatcctc
     5101 gtcgataccg agacggggct cggtgtcggc tacgacctct tcgaaggcgc cgacgacgac
     5161 acgcacctgt tcaagatgta cgggggtcag gtttacggcg tgagcgcgat cctcggcgcg
     5221 gcgaccagca ccggctggga gtgagcgggc tcagagcttg gagcgacctt cgcacacggc
     5281 gacttgtgtc atgtgctgcg cgccgaagcg cacgagcgcg tcgcggtaac cccggcccgt
     5341 ttgcacggcg acggcgctct cgacgttcga cccgccgaag cgaacgcgca tgtcgcgata
     5401 gccgggcccc gcgaccacgg gcgcgccttg gcagagcgcg tcgtcggcgc gctcgtgcgc
     5461 ctgcacgacg gccggcggct gtcgcgcgaa ggcgagcgct gaggacgaga ggatgccgag
     5521 gacgacgaat gaggagcgag cgatgcttgc aatggacatg ggatgcctcc ggctcgatga
     5581 gagcctctgc gtgcacactt gaccctgagc ggcgacgcag cgcgtcgcgt ggtcaagttc
     5641 gagccaacgt tctgtaggta ggtacgccgc gccatgacgg tggtttcacg gtcttttcgc
     5701 gatcaggccg attcggccgt taaacggcga agtggggcct ccgaacggct cgctgacgcg
     5761 gcgcagcctg cgagagcgga gcgcgttgcc gcgcgggacg ttgccgtcga acgccgctcg
     5821 cggcgcgacg gaaaagcttg gcagcaattc gaggcgcact cgtacagggc cccgggagcc
     5881 gtacggtacg caagcgtgac aggctcgtgt gctgacggag actgcctcgc atggacgacg
     5941 ggactttcgg ttgatgtgct ctgtctttag gtatacctgt ccgagtcatg ctgtcggccc
     6001 cgcgtcagcg cgggcaaccc ggcggtgtga gtctgtgcgt gcttcagggg ttcgggacga
     6061 cgagatgagg caaagtgaca atcgcggaaa ctgacatcgg tcgcccgcgc tctcggcggc
     6121 gtcgcggcgc cacgagccgc gcagaggtcg tcgcggcagc cctcgcggtc gccgacagcg
     6181 tgggtctcga cggcttcacg attcgcgccg tggcgcgctt cgccagcgtc ccgacgatgt
     6241 ccctttacac gcatttcacg agcaaagaag agctgctcga tctcatgcat gccgaggtag
     6301 tcctgcggct gtacgccgac gacgagtatt cgagctggca gctgggagtc ctcgccttgt
     6361 gcaataggat ccgcagcacg ttgatcgcgc acccgcactg ggtgccgctg ctc
//
LOCUS       DATIML010000116         1838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2333261, whole genome shotgun sequence.
ACCESSION   DATIML010000116 DATIML010000000
VERSION     DATIML010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2333261"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /locus_tag="VLJ38_01965"
     CDS             <1..886
                     /locus_tag="VLJ38_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38293.1"
                     /translation="GRAARAAASSAEDAARAGRELLAMRNHAYTFHTGGGFSFGEGWY
                     LAAAAVLAGVDIQIEPDTPGTAAAEAFLRDAGLVQRIQPYRSRPRAMKHATALVARAF
                     RADPVSAQRRLRAAFLGTAPVAREISDWIERRVFAATTKTTDKKVLLWIRDGVHHSGR
                     NTLPAELLALTTLVQRAGLVPIWTGDAMRGASMPDGVVDTVLFWKEPMFQRTDRRRAQ
                     LQFFEDLKARHALVGQLGVTTAGMDGPALMGLPTLYLTELPNVRMREWVGAVPGYAEV
                     VRESGYLERIARALSGWL"
     gene            complement(883..>1838)
                     /locus_tag="VLJ38_01970"
     CDS             complement(883..>1838)
                     /locus_tag="VLJ38_01970"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU38294.1"
                     /translation="QLLLFSRQQVTEPKVLDLNETLAGMARILRRVLGEDIELTPVSG
                     ANLGRIRADPSHAEQVIMNLVVNARDAMPRGGKLTIETDNVELDARFAREHLGSNAGP
                     HVMLAVTDTGTGMDAATQSRIFEPFFTTKGAGKGTGLGLSTVFGIAQQCGGSVWVYSE
                     LGQGTTFKVYFPRVDAVVDAPRTLQAPATLRGSETILLVEDQEQVRAVAAGILKRNGY
                     HVLSASSAAEALRLGAAHAGKIHLLLTDLVMPQMSGAELANQLTTTRPELKVLCMSGY
                     TDDSVVRHGVLDSRIAFLQKPFTPESLTRRIREVLEATDER"
BASE COUNT          284 a          614 c          626 g          314 t
ORIGIN      
        1 cggccgcgcg gcacgcgccg cggcgagcag cgccgaagac gcggcacgcg ccgggcgcga
       61 gctcctcgcg atgcgcaatc acgcttacac gtttcacacc ggcggcggct tctcgttcgg
      121 tgaaggctgg tacctcgcgg cggcggccgt gctcgcgggt gtggacatcc agattgagcc
      181 ggacacgccg gggacggcgg ccgccgaagc atttctgcgc gacgcggggc tcgtgcagcg
      241 cattcagccg tatcggtcgc ggccgcgggc catgaaacac gcgacggcgc tcgtcgctcg
      301 cgctttcagg gcggatccgg tgtcggccca gcgcaggctt cgcgccgcgt tcctcgggac
      361 tgccccggtt gcgagggaaa tcagcgactg gatcgagcgc cgagtcttcg ccgcgaccac
      421 caagaccacg gacaagaagg tgctgctctg gatccgcgac ggtgttcacc actccggccg
      481 caatacgctg ccggccgagt tgctcgcgct cactaccctc gtgcagcgcg cgggactcgt
      541 cccgatctgg acgggcgacg ccatgcgtgg ggcgtcgatg ccggacggcg tcgtcgacac
      601 cgtcctcttt tggaaagagc ccatgttcca gcgaaccgac aggcgccgcg ctcagctcca
      661 gttcttcgag gacttgaaag cacgccacgc tctcgtcggt cagctgggcg tcacgacggc
      721 cggcatggac ggccccgcgc tcatgggtct accgacgctc tacctcacgg agctaccgaa
      781 cgtccgcatg cgcgagtggg tgggcgccgt gcccggctat gcagaggtcg tgcgcgagag
      841 cggctatctc gagcgcatcg cgcgcgcgct ttccggttgg ctctagcgtt cgtcagtcgc
      901 ttcgagcacc tcgcgaattc tgcgagtgag cgattccggc gtgaagggct tctgcagaaa
      961 cgcgatgcgg ctgtcgagca cgccgtgacg aacgacgcta tcgtccgtgt agccggacat
     1021 gcagagcacc ttgagctcgg gccgtgtggt cgtgagctgg ttggcgagct ccgcgccgct
     1081 catttgcggc atgacgagat cggtcaagag gaggtggatc ttgcccgcgt gggctgcgcc
     1141 cagacgcagg gcctcggcgg cgctcgacgc cgagaggaca tggtagccgt tacgtttgag
     1201 aatgccggcg gccacggcgc gcacctgctc ctgatcctcg accagcaaaa tcgtctcgga
     1261 gccgcggagc gtcgccggcg cttgaagcgt cctcggcgcg tcgaccacgg cgtcgacgcg
     1321 tgggaagtag actttgaacg tcgtaccttg gccgagctca ctgtagaccc acacgctgcc
     1381 gccgcactgc tgcgcgatgc cgaacacggt agacaagccg agccccgtgc ctttgccggc
     1441 gcccttcgtg gtgaaaaagg gctcgaaaat ccgcgactgc gtcgccgcgt ccatgccggt
     1501 gcccgtgtcg gtgaccgcca gcatgacgtg tgggcccgcg ttcgagccca gatgttcgcg
     1561 cgcgaagcgt gcgtcgagct cgacgttatc cgtttcgatg gtcagctttc cgcctcgcgg
     1621 catggcgtca cgcgcgttga cgacgagatt catgatcacc tgctcggcgt ggctcgggtc
     1681 cgcccggatg cggccgagat tcgcgcctga aactggcgtg agctcgatgt cctcgcccag
     1741 gacacgtcgc aggatcctgg ccatgcccgc cagcgtctcg ttcaaatcga gcaccttcgg
     1801 ctcggtcacc tgctggcggc tgaaaaggag cagctggc
//
LOCUS       DATIML010000117         6543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4932905, whole genome shotgun sequence.
ACCESSION   DATIML010000117 DATIML010000000
VERSION     DATIML010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6543
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4932905"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VLJ38_01975"
     CDS             complement(<1..768)
                     /locus_tag="VLJ38_01975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38295.1"
                     /translation="MSFNRRAEAAIIALLLATGAWGVPSRAQAAAPASAPAQDGKARF
                     AEAVRLYKAGDFSHALPEFEALASETGSPNARLYVGYCYAGLERPADAYTAFELAARG
                     AGSDERYAETRTAALSELSNLTLRISKLVVSPVEQPPGLVVKVDGVVLEPGAFDTHRV
                     FPPGDHRVEATASGHDPIVRDVHVEGGETKTVTLFFPKNEAAPARPEGASAPRNDGSA
                     LRTAGFVAAGVGGAGLITFVVGGLEAKKAHDSLEQACG"
     gene            complement(758..2257)
                     /locus_tag="VLJ38_01980"
     CDS             complement(758..2257)
                     /locus_tag="VLJ38_01980"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38296.1"
                     /translation="MSYPAGDDKQAHQRVGRYEIFDPIAAGGMATVHLARLSGAEGFS
                     RVVAVKRMHPHFLVDPAFKAMFVAEARVAARVRHPNVVPILDVLAEHDEIVIIMDYVH
                     GESLMALTRAARKWGAGVPIEVASSVMVGMLQGLHAAHTAHDEQGRPLGLVHRDVSPQ
                     NVLVGTDGVARVLDFGIAKAIRAREAHGDTDPGVLKGKFSYIAPELIQGAAPSPQSDL
                     FSAAVVFWELLTATKLFHGVNEQDRLVRIVQGNYPSPRSVAPHVPEVLERIVMRGLEL
                     EPEQRHASALDMAIELENAVTLASQRIVGEWVSKLAGDVLAQRTELIHQVEASTISVV
                     RRSVAPDAVSTVPAVSATPPGFEAPPVAPKMRGLPGKQRRFGVALAALAGVVLTALGL
                     VHVLRAPVHDATTTARGGDTAAHATSPAPSATLPAPRAPVAPPLTAAAAPAVATAPTL
                     ALAPDAASNPSLRATPHHAPATHSLAAPITKTPAHAGPKRRAAYLPNEL"
     gene            complement(2396..3592)
                     /locus_tag="VLJ38_01985"
     CDS             complement(2396..3592)
                     /locus_tag="VLJ38_01985"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HSU38297.1"
                     /translation="MQRTSTLLFVTCLATLAWSPSVEAAKIACVGDSITFGYGLSDAN
                     SQSYPAVLQTLLGASHTVRNFGVSGTTLLKNGDRPYWDEANFGASGDFSPDIVIVMLG
                     TNDAKAQNWSHASEFTGDYDALVAHYRALGALVYVAAPPPVYAPGAYDIQPDVLNDDI
                     VPRERQIAADLGAPLVDVYQALSGKSADFPDTVHPNADGARIIAQTVNAALASYGFGG
                     NPSAGAAGGGPGGRAGNDGGRSNGDGGRTSTAGSSLGGGDTAGSSAGVNAAGGSGGRV
                     GALGGNAGIGGVATNAGASGTPAGGRPSAAGGASGMTANSAGNQSTGGRAGVTGAGGV
                     AGVSGAPGVAGAGAASTPRTRASDDANDGCGCRIERDREPRLGAALLACLAVMARRRR
                     KPRVRT"
     gene            3744..4208
                     /locus_tag="VLJ38_01990"
     CDS             3744..4208
                     /locus_tag="VLJ38_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSU38298.1"
                     /translation="MSSSTTADRIEKRITLRAPRTRVWRALSEASQFGAWFGMKFEGP
                     FEAGKTIRGNITTRGYEHLSVELRVERVEPEQLFSYRWHPYAIDAEHDYSAEPMTLVE
                     FRLSETTGGTELSIVESGFERIPVDRRAEAFRMNDGGWSAQLKNIERYVAGV"
     gene            4192..4539
                     /locus_tag="VLJ38_01995"
     CDS             4192..4539
                     /locus_tag="VLJ38_01995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSU38299.1"
                     /translation="MSRASNVAARKVASAALVFAALGDETRLALVSRLAADGPRSIAE
                     LSAGASVTRQAITKHLRALAVAGLARDTRRGRESIWELTPGRLESARSYLDEVSAHWD
                     LALGRLRAFVEEP"
     gene            complement(4571..5131)
                     /locus_tag="VLJ38_02000"
     CDS             complement(4571..5131)
                     /locus_tag="VLJ38_02000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HSU38300.1"
                     /translation="MAKLVSFMTLSVDGYYSRPDGDLGFAHRSDPEFDAFVADNARSG
                     GNLLFGRVTYEMMLAYWPTPAAHANMPVVADGMKRASKFVTSRTLKDASWANTTLLKG
                     PLVNEIEQLKRDAKQPIVILGSASLVTQLSDAGLIDEYQIVLAPVALGAGRSLFAGMQ
                     RELALELTETRKFSNGNVFLRYASAR"
     gene            complement(5172..5639)
                     /locus_tag="VLJ38_02005"
     CDS             complement(5172..5639)
                     /locus_tag="VLJ38_02005"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSU38301.1"
                     /translation="MTDIRISRDYPHPPPKVWRALTDPALIALWAMRPEGFSPVVGTR
                     CRFVGKPQPGWRGFVECEVLEVRAPETLLYSWVGNEGEEPSYVRYTLEARAAGTRLIF
                     QHTGFKGASGFLLAKFVMTPGWKKTFAGLFPRVLAELDERGELKSTSTLTSLY"
     gene            complement(5636..5971)
                     /locus_tag="VLJ38_02010"
     CDS             complement(5636..5971)
                     /locus_tag="VLJ38_02010"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSU38302.1"
                     /translation="MSRGASSESVFQAIACPTRRALIDALARGEKHVSSLVAAVSVSQ
                     SAVSQQLAVLKNAGLVDERAEGRFRYYRLRAQPLGEIDVWLNRYRAQIERRLDALGDV
                     LDALPDEEP"
     gene            6174..>6543
                     /locus_tag="VLJ38_02015"
     CDS             6174..>6543
                     /locus_tag="VLJ38_02015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38303.1"
                     /translation="MSEPNEGALVGRETTKRERRTLEAWSAFFRDRYLSLDVRWLGVF
                     RIGLGTLLCVEVLRRWYYAKPFYTNEGLLPNHYSLFAPMGRNVFSIYHAFSSYGEVSV
                     AFALTLLVFLAFTLGYRTRLF"
BASE COUNT         1031 a         2217 c         2238 g         1057 t
ORIGIN      
        1 gccgcaagct tgctcgagcg agtcgtgcgc ctttttggcc tcgagtccgc cgacgacgaa
       61 cgtgatgagc cccgcgccgc cgacgccggc tgcgacgaac ccggccgtgc gcagggccga
      121 gccgtcgttg cgcggcgcgc tcgcgccttc gggacgagcg ggggccgcct cgttcttcgg
      181 aaaaaacagc gtgaccgttt tcgtttcgcc gccctcgacg tgcacgtcgc gcacgatggg
      241 gtcgtgcccc gatgcggtcg cttcgacgcg atgatcaccc gggggaaaca cgcggtgcgt
      301 gtcgaacgct ccgggctcga gcacgacacc gtcgaccttc acgacgagcc caggcggctg
      361 ttcgacgggc gacacgacga gcttggaaat gcgcaacgtg aggttcgaga gctcgctcag
      421 cgccgcggtg cgcgtctcgg cgtaacgctc gtcggacccg gcgccgcgcg cggcgagctc
      481 gaacgccgtg taggcgtccg cgggtcgctc gagcccggcg tagcaatagc ccacgtacag
      541 ccgcgcattc ggactgccgg tttcgctcgc gagcgcttcg aactcgggca aagcgtggga
      601 aaaatcaccc gctttgtaca gccgcaccgc ctcggcaaac cgcgctttgc cgtcctgggc
      661 gggcgcgctc gccggcgccg ccgcttgggc gcgtgacggc acgccccacg cgcccgtggc
      721 gaggagcagc gcgatgatgg ccgcttcggc cctacggtta aagctcattg ggtaaatagg
      781 ccgcgcgccg cttagggccg gcgtgcgccg gggtcttcgt gatcggggca gccagcgagt
      841 gggtggccgg cgcgtggtgc ggcgtcgcac gcaacgaggg gttgctcgca gcgtccggag
      901 caagcgccag ggtcggagcc gtggcgacag caggtgcggc cgcagcggtc aggggcggag
      961 ccaccggcgc tcgtggtgcg ggtagcgtcg cggatggtgc aggtgacgtc gcgtgtgccg
     1021 cggtgtcgcc cccgcgcgcg gtcgtggtcg cgtcgtgcac gggggcgcgc agcacgtgga
     1081 cgagcccgag cgccgtcaag acgacacccg ccaaagcagc gagcgcgacg ccgaagcgcc
     1141 gctgtttgcc cggcaagccg cgcattttcg gcgcgaccgg cggcgcttcg aagccgggcg
     1201 gcgtcgccga caccgcgggc accgtcgaga cggcgtccgg cgcgaccgaa cgccgcacga
     1261 cgctgatggt cgacgcttcg acctgatgaa tcagctccgt gcgttgcgcg agcacgtcgc
     1321 ccgcgagctt cgacacccac tcgcccacga tgcgctgcga ggcgagcgtt accgcgttct
     1381 ctagctcgat cgccatgtcg agcgcgctcg cgtgtcgctg ttcgggctcg agctccagac
     1441 cgcgcatcac gatgcgctcc aagacctccg gcacgtgcgg cgcgacgctg cgtggggaag
     1501 gatagttccc ctgcacgatg cgcacgagcc ggtcctgctc gttgacgccg tgaaacagct
     1561 tggtcgcggt gagcaactcc cagaacacga ccgccgccga aaacaagtcc gattgcgggg
     1621 agggcgcggc gccttggatc agctccggcg caatgtacga aaacttaccc ttgagcacgc
     1681 cgggatcggt atcgccgtgc gcctcgcgtg cgcggatggc tttcgcgatg ccgaagtcga
     1741 gaacgcgcgc gacgccatcg gtcccgacga gcacgttctg cggcgacacg tcacgatgca
     1801 cgagcccgag cggacgcccc tgctcgtcgt gcgccgtgtg cgcggcgtgc aggccctgga
     1861 gcatgccgac catcaccgag cttgccacct cgatggggac cccggctccc catttgcgcg
     1921 ccgcacgggt gagcgccatc agcgactcgc catgcacgta atccatgatg atgacgatct
     1981 cgtcgtgttc ggcgagtacg tccaagatcg gcacgacgtt cggatgccga acgcgggccg
     2041 cgacgcgcgc ctcggcgacg aacatcgcct tgaacgccgg atcgacgaga aaatgcgggt
     2101 gcatgcgctt gacggcgacg acgcgcgaaa agccttcggc gccgctcaac cgcgcgaggt
     2161 gcaccgtcgc cataccgccc gcagcgatgg gatcgaaaat ctcgtagcgg cccacgcgct
     2221 ggtgagcttg cttatcgtcg cccgccggat agctcatggc tcgcgaccgt cccacaccga
     2281 agcgtaccac gcgtccgcgc tcagctacgc cgtaatggcg cgcgcgccgc acgaaggtgg
     2341 gtagagcgcg gcgcgtgtgg gcgcgccgcg cagcttcgca ggcaaggtgc gttcgttaag
     2401 ttcgaacgcg cggcttgcgt cggcgccgtg ccatcactgc aaggcacgcg agcagtgccg
     2461 cgcccagccg cggctctcga tcgcgttcga tgcgacagcc gcaaccgtcg ttcgcgtcat
     2521 cgctcgctcg ggtgcgcggc gtactcgcag caccggcgcc ggcaaccccc ggcgcgcccg
     2581 agactccggc gacgccaccc gcgcccgtca cccccgcgcg accgccggta ctctgatttc
     2641 cagccgaatt tgcggtcatg ccgctcgcgc cgccagccgc ggaaggcctg ccgcccgccg
     2701 gcgtgccgct cgctccggca ttcgttgcaa ctcctccgat tccagcgttg ccgccaagcg
     2761 ctcccactcg accgccggag ccgcctgccg cattcacgcc cgcgctcgac cccgcagtgt
     2821 cgccgccgcc gagactcgag cccgctgtac tcgtgcgtcc gccgtcgccg ttgctgcgcc
     2881 cgccgtcgtt gcccgcgcgt cctcccgggc cgccaccggc cgccccagcg ctcgggttgc
     2941 cgccgaagcc gtagctcgcg agcgcggcgt tgaccgtctg cgcgatgatg cgggcgccgt
     3001 cggcgttggg atgcaccgtg tctgggaaat cggcggactt gccgctgagt gcttgataga
     3061 catcgacgag cggagcgcca aggtctgcgg cgatttgcct ttcgcgcggg acgatgtcgt
     3121 cgttcaggac gtccggttgg atgtcgtacg cgcccggagc gtaaacgggc ggcggcgccg
     3181 cgacgtacac gagtgctccg agcgcgcggt aatgcgcgac gagggcgtcg tagtcgcccg
     3241 tgaactcgct cgcgtgcgac caattctgcg ccttcgcgtc gttggtgccg agcatcacga
     3301 tcacgatgtc gggcgaaaag tccccgctcg caccgaaatt cgcctcgtcc cagtagggtc
     3361 ggtcaccgtt cttgagcagc gtcgtgccgc tcacgccgaa gttgcgcacg gtgtggctcg
     3421 cgccgagcag cgtctgcagc accgccgggt agctctggct gttcgcgtcg ctgagcccgt
     3481 aaccgaaggt gatgctgtcg ccgacgcacg cgatcttggc ggcttctacc gacggcgacc
     3541 aggcgagcgt cgccagacaa gtgacgaaca ggagcgtcga ggtccgctgc atgcgtgagc
     3601 tcgagggcta ccacgttcgc gggcgcctcg agggtcgagg cgacgcccgg cgaccttttc
     3661 tgcaaccggg gggttgcgtt tacggagccg gcgcctagaa tgcaaccagc gggttgccaa
     3721 ttacccgcag gagagcagga aacatgagca gttcgacgac cgccgatcgc atcgaaaaac
     3781 gcatcacgct acgcgcaccg cggacgcgcg tctggcgcgc cttgtccgaa gcgagccaat
     3841 tcggcgcctg gttcggcatg aaattcgagg gacccttcga ggcaggcaag accatccgcg
     3901 gcaacatcac gacgcgcggg tacgagcacc tgtcagtcga gctccgcgtc gagcgagtcg
     3961 agcctgaaca gctattttcg taccgctggc acccttacgc catcgacgcc gagcacgatt
     4021 attcggcgga gcccatgacg ctcgtcgaat tccggctgag cgaaacgaca ggcggcaccg
     4081 agctcagcat cgtggagtcc ggcttcgagc gcattccggt ggaccgccgc gccgaagcgt
     4141 tccgcatgaa cgacggtggc tggagcgcgc agctcaagaa catcgagcgc tatgtcgcgg
     4201 gcgtctaacg ttgcggcgcg caaggtggcg agcgccgcgc tcgtgttcgc cgcgctcggc
     4261 gacgagacgc ggctcgccct cgtgtcgcgg ctcgcggcag acgggccgcg ctcaatcgcg
     4321 gagctttcgg cgggggcgag cgtcacgcgc caggcgatca cgaagcactt gcgggcgctc
     4381 gccgtggcgg gtcttgcacg cgacactcgc cgcggtcgcg agagcatctg ggagctgacg
     4441 ccgggacgac tggaatccgc gcggagctac ctcgacgagg tttcggcgca ttgggacctg
     4501 gcgctcggac gactgcgcgc gttcgtcgag gaaccctgag ccggcgactc aaccatgggc
     4561 ggcgcgcgcg tcagcgtgcc gacgcgtagc gcaggaagac gttgccattc gagaatttgc
     4621 gcgtttccgt caactccagc gcgagctcgc gctgcatgcc cgcaaagagc gaacggccgg
     4681 cgccgagcgc gaccggcgcg agcacgattt gatattcgtc gatcagaccg gcgtccgaga
     4741 gctgcgtcac gaggctcgcg ctgccgagaa tgacgatggg ctgcttcgcg tcgcgcttga
     4801 gctgctcgat ttcgttcacc agtggaccct tgagcagcgt cgtgttggcc cagctcgcgt
     4861 ctttgagcgt gcgcgacgtg acgaatttcg acgcgcgctt catgccgtcc gccacgacgg
     4921 gcatgttcgc gtgcgcggcg ggcgtcggcc agtaggcgag catcatttcg taggtgacgc
     4981 gaccgaagag taggttgccg cccgagcggg cgttgtcggc gacgaacgcg tcgaattcgg
     5041 ggtcgctgcg atgtgcaaag ccgaggtcgc cgtccgggcg cgagtagtaa ccgtcgaccg
     5101 acagggtcat gaacgacacc agtttcgcca tgtggatctc cgaggactcg tggattcgca
     5161 aatgaatgag ctcaatagag cgacgtgagc gtgctcgtcg acttgagctc gccgcgctca
     5221 tcgagctcgg cgagaacgcg cgggaagagc ccagcgaacg tcttcttcca gccgggcgtc
     5281 atcacgaatt tggcgagcaa gaagccgctc gcgcccttga agcccgtgtg ctggaagatg
     5341 agccgcgtgc ccgcggcgcg cgcttcgagc gtgtagcgga cgtaactcgg ctcctccccc
     5401 tcgttgccga cccaggagta gagcagcgtc tcgggggccc gcacctcgag cacttcgcac
     5461 tcgacgaagc cgcgccagcc gggctgcggc ttaccgacga agcggcagcg cgtcccgacc
     5521 accggtgaaa acccctcggg ccgcatcgcc cagagcgcaa tcagtgcggg atcggtgagg
     5581 gcgcgccaga ctttgggggg cggatgcggg tagtcgcggc tgatgcggat gtcggtcatg
     5641 gctcctcgtc gggtagcgcg tcgagcacgt cgccgagcgc gtccagtcgt cgctcgattt
     5701 gcgcgcgata gcggttgagc cacacgtcta tttcgccgag cggttgcgcg cgcaaccgat
     5761 aataacgaaa ccgtccttcg gctcgctcgt ccaccaagcc cgcgttcttg agcacggcga
     5821 gctgctggct cacggccgat tgagacacgc tcactgccgc gaccaagctc gagacgtgct
     5881 tctcaccgcg agcgagcgcg tcgattagcg cccggcgcgt ggggcacgca atggcctgaa
     5941 acacactctc ggagctcgcg ccgcgcgaca tcgaggacac gatatatgag ctttcactaa
     6001 tatgtcaatc ccgcccattt cccgcagaaa atgcgcggat cgcgttttcg gggcgcagtg
     6061 cctgcgcgca tgctggcagc gcgtcttgct ggcgcgccgc acgagcctcg gctttgcggg
     6121 ctttgcacgg ggcgcgccgc tgacggcatc gatcttgctc gcgcgtgcgt cgcatgagcg
     6181 aaccgaacga aggcgcgttg gtcgggcgcg agacgacgaa gcgcgagcgc cgcacactgg
     6241 aggcatggag cgcgttcttc cgcgaccgct acttgagcct cgacgtgcgc tggctcgggg
     6301 tctttcggat cggactcggc acgctgctct gcgtggaggt cctgcgccgc tggtactacg
     6361 cgaagccgtt ctacacgaac gagggactct taccgaacca ttactcgctc tttgcgccga
     6421 tggggcgcaa cgtcttttcg atttaccacg ccttctcgag ctacggcgaa gtcagcgtcg
     6481 cgttcgcgct gacgctgctc gtgttcctgg cgttcacgct cggctaccgc acgcggctgt
     6541 ttc
//
LOCUS       DATIML010000118         8049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3489078, whole genome shotgun sequence.
ACCESSION   DATIML010000118 DATIML010000000
VERSION     DATIML010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8049
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3489078"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VLJ38_02020"
     CDS             complement(<1..216)
                     /locus_tag="VLJ38_02020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38304.1"
                     /translation="MSSTSRSMVIVTGDFVKTGGMDRANYALAEYVSGQGSAVELVAH
                     RAAQELTDRPNVTLRRVPKPLGSYILGD"
     gene            346..1467
                     /locus_tag="VLJ38_02025"
     CDS             346..1467
                     /locus_tag="VLJ38_02025"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU38305.1"
                     /translation="MRVVLASNFPRDERLGSARTPLRLEPELRRLGVDLVTLFAEELP
                     AAPRGRAAELSAPFRMAWALEKYAKTADIVDVAGGDGFAYFRYARALRPRQVLVAHSN
                     GLWDLALAAEDPGRQTLVRRVASRLYQDQIICRWEQSSIRRSDVAVFLSRADADAVVR
                     RGWKTQDGVRGINPGVDEFFMHGAALETRRDVAFVGTFFHRKGKDVVSQVMSELMLER
                     PGLALTLFGVGVPAEAVRREFDERVRSRVHVELSLTPRELAARLERFAVLLFPTRYEG
                     FGIVVSEAMARGLAVVTTRTGAGADLIRDGQNGLIVPVGAPRETKSAVARLLDDDSFR
                     LDVARAAVTRASDLTWSRAAEELVSTYRQTMARRVGVSA"
     gene            1606..3123
                     /locus_tag="VLJ38_02030"
     CDS             1606..3123
                     /locus_tag="VLJ38_02030"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MraY family glycosyltransferase"
                     /protein_id="HSU38306.1"
                     /translation="MKSFLAAFVLALVGSSFLTPLGRRIAFARGIVARNGARHIHEGR
                     IPRLGGIALALGWCLALLAFLPLRGLGTETIERSTTQFVGILIGAVLLCGVGAVDDIR
                     GLRAHTKLAAQMIVSVFAYSCGVRIDAIYLPFAGTLSMGVFAVPVTVLWIVGITNAVN
                     LIDGLDGLAAGVSLFAALTGFIVAVHTGSLLIALSLSALMGVLVGFLFYNFSPARVFM
                     GDSGSYFLGYVLATTSLAGSVQQKTSTAVSLLVPMAALGLPIFDTLFSMLRRFLEKRP
                     LLSPDRGHIHHRLLELGLTHRRAVIVLYAVSVAFAACALLLSFGGSWVNGTAIVAAAL
                     VILGLMRVTGYFDYLNRRGRSEARIYDALTERLRRAIPDVLTGLHTADDEGDAFRLLR
                     RTLGDAGCSAIELRSEGRVIYRFPEAASDQTGAIRRSYPVGPDSVARAQVEFVWHVDD
                     GDPTLQACVLLQLVADGLARAFARCRSELAPAPLPDLVPSEPPAAVVAISGTSRP"
     gene            3120..5384
                     /locus_tag="VLJ38_02035"
     CDS             3120..5384
                     /locus_tag="VLJ38_02035"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HSU38307.1"
                     /translation="MSQPSLIPTPSRASVAPSTQALPEEGGFSLELLARALRKNWFLV
                     VLAVGAFALGASLYTSRLTRIYQAVATVQLDPQPLMPLGNQLGAQTGPETYWSNQEYF
                     ATQHQVLTSRKIAEAVVRKLGLNRDHSFVANTRGGPTTNAEVPVETAAEILRGRLDVK
                     PVADSRLTRVTYQDADPARAQRIAATLVDEYVEQNLDRTLDSASQRAEWLDTQLVKLK
                     TELESQEMDLHDFKRKNNLLSVSFDDQSNMLRAEIQQLNAALTELKARQERVAARLAV
                     LQAIDASNPSAIPQSELLGDVLLGALRTNYIDAQKELLRLSALGKGENHPDIQAAEVA
                     VESSRSALLGELENIRKGCAADLDAVRRELAGVTRLYETSKSQAMDLNLNEVRYARLR
                     RSKDNTEHVFGVVLERSTESGLSKLMPFNNVRVLDRPLQPSAPILPRPALNLALGAAL
                     GLLIGLCFAVGRELLDRTVRDPEDVERELGIPSIGSLPDVASRAGLAALYYGRYSQEG
                     DKKQSHRPDPAIDRIVPELLVHHYPKSAAAEAARAIRTNLLLTSPDRPYKTLLVTSPG
                     PAEGKTMVAASIAIAMSQTGQRVCLVDCDLRRPRVHNLFGSPIEPGVTVAMLDPSRLD
                     EALIKTEATNLWVLPAGPTPPNPADLMHSEAFGRLLLELQSRFDRVVIDSPPACVVTD
                     SVVISTRVDATLLVVRARRTRRDAARRALRALSDVGGALPGFIMNAVTSTSEGYPYTY
                     YGTYGEDRRHPSQT"
     gene            complement(5393..6742)
                     /locus_tag="VLJ38_02040"
     CDS             complement(5393..6742)
                     /locus_tag="VLJ38_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38308.1"
                     /translation="MVESALRTQRPSALGRAERTTSLRPASGGSAVWVYTYVVVQLLS
                     QLALLVESLAGARVFIRSAALGTSLLFLVLAPGRTRNWGIERALWLGALVIETLAMFN
                     PLGGSALSVIAHWSFNLAVMAPLLWVGRLDIPRGTVARVLLLLWGFHTLGSILGVLQV
                     YFPGQFEPSFTSLTERGHLMIQLSSGEWMLRPAGLTDTPGGAGMNGLYAALFGSGVVL
                     VRPFRFARAAGSISICLGLMCIYLSQVRSALVMLIVCFIVLTLLLSISGRATRATTFA
                     LLVGIAALGVFYLALRVGGQMMSTRVSSLVATDPGTVYYANRGRMLEYTFSELLPRYP
                     LGAGLGHWGMINAYFGAPEQEIGAEIQIAGWLLDGGLPLVFAYMAAVLAAILYTCRVS
                     LLPGHDEAIWASVIAAYSVGALALCFSYPLFMSSAGLEFWLVNALVMQEVPLRPRAS"
     gene            complement(6828..>8049)
                     /locus_tag="VLJ38_02045"
     CDS             complement(6828..>8049)
                     /locus_tag="VLJ38_02045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38309.1"
                     /translation="DDAVEQSSQRTLRPALPASLAVVFWSLIVVFAGSNPVQVDRRQA
                     AEAYVAWGKSPAAPGSFDGTLRALMLRHPGEAYFPLLGGAAAIRTGRDALPWLNRALE
                     RSPFDADTHLLLSDALAQRGARRQSLLHSRLAAVYDDTLRDRALTQIAARVLTIDDLH
                     AAFPADLPGSDLLEQVCTRLVPALVVECFRDALSRHAGSSTRLGLAMALVRSLSARSA
                     PCTEDARDRCNAEALALLASLENSEVPATKLAELRADLLSLKGEEGRAAKILAAECAG
                     RPEAATCYSQAFDLSLRSRDALTLGDIANRFASLVCSDPVACAALRERTGRAYLELAA
                     PGLALRQFKAAAEASPTADRWLLVAEAAAKAGATSAALLALQQVKREPEPAPHQDERI
                     LAVQRAISPEPADE"
BASE COUNT         1323 a         2693 c         2700 g         1333 t
ORIGIN      
        1 atcgcccagg atgtacgagc cgagcggctt cgggacgcgg cggagcgtga cgttcggccg
       61 gtccgtgagc tcctgcgccg cccgatgggc cacgagctcc acggcgctgc cctggccgct
      121 cacgtactcg gcgagggcgt agttcgcgcg atccatgccc cccgtcttca cgaagtcgcc
      181 cgtgacgatc accatgctgc gactcgtgct cgacaagggt cggagcgttt tctaccacca
      241 cttggccgcg ctgaggcacg tcgattggcg gcgtgcgagc tcggcagagc aaagcttttc
      301 ggtgacgagc cggcgcgctc gaggctacct tgccggcgtc agcgaatgag agtcgttctt
      361 gcctcgaact tcccgcgcga cgaaagactc ggttccgcgc gcacgccgct ccgcctcgaa
      421 cccgagcttc gccggctcgg cgtcgacctc gtcacgctct ttgccgaaga gctccccgcg
      481 gcgccgcgag gccgggcggc cgagctgtcc gccccgtttc gcatggcttg ggcgctcgaa
      541 aaatacgcca aaacggccga tatcgtcgac gtcgcggggg gtgatggctt cgcctatttc
      601 cgctacgcgc gggcgctccg tccgcgccaa gttctggtcg ctcactcgaa cggtctctgg
      661 gatctcgcgc tcgcagccga ggatccggga cggcaaacgc tcgtacggcg cgtggcgagc
      721 cgtctctatc aggaccagat catctgtcgc tgggagcaga gctcgatccg gcgctcggac
      781 gtggcggtct tcctttcgcg cgccgatgca gacgccgtag tgcgacgcgg ttggaagacg
      841 caggacggcg tcagggggat caaccccggc gtggacgagt tcttcatgca cggcgctgcg
      901 ctcgagacac gccgagatgt cgcgttcgtc ggcacgttct ttcatcgcaa ggggaaggat
      961 gtcgtttccc aagtgatgtc ggagctcatg ctcgagcgtc caggccttgc gctcactttg
     1021 ttcggggtgg gcgtgcccgc ggaggccgtg cgtcgtgaat tcgatgaacg tgtgcgctcg
     1081 cgcgttcacg tcgagctttc cctcacgccg cgcgagctcg ccgcgcggct cgagcgcttc
     1141 gcggtgctgc tgttccccac gcgttacgaa gggttcggca tcgtcgtgag cgaagcgatg
     1201 gcgcgtggcc ttgcggtcgt caccacgcgg accggcgcgg gcgccgacct gatccgcgac
     1261 ggccagaacg gactcatcgt gcccgttggt gcgccccgcg aaacgaaatc ggctgtggca
     1321 cgtttgctcg acgacgattc atttcggctg gatgtcgcga gggcggcggt cacccgggcg
     1381 agcgatttga cgtggtcgcg cgccgccgaa gagctggttt ccacctatcg ccagaccatg
     1441 gcgaggcgag ttggcgtgtc ggcctgatcg cgggccggcc ggtcgttcta cgcgtggcgt
     1501 attgccaatc tcgacggagt acggcgatag agcctaaagt tccgccggct cgcgaatgag
     1561 aggtcgctga gccgcaacca acgaccggga aaagggaaac gcggtttgaa gagtttctta
     1621 gcggcgttcg ttctcgctct ggtcggcagc tcgttcctga cgccgctcgg gcggcgcatc
     1681 gcgttcgctc gcgggatcgt cgcgcgcaac ggggcccgcc acattcacga agggcgcatc
     1741 ccgcggctcg ggggcatcgc gctggctctc ggctggtgtc ttgcgctgct cgcgttcttg
     1801 ccgctccgcg ggctcggcac cgagacgatc gagcgttcga cgacgcaatt cgtgggcatt
     1861 ctcatcggcg ccgtcctctt atgcggtgtc ggtgccgtcg acgacatccg cggcttgcgc
     1921 gcccacacga agctggccgc ccagatgatc gtcagcgtgt tcgcctattc gtgcggcgta
     1981 cggatcgacg cgatctattt gccgttcgcc ggtacgctgt cgatgggggt gttcgcagtc
     2041 cccgtgacgg tgctctggat cgtcggtatc accaacgccg tcaacctgat cgacggcctg
     2101 gacgggcttg ccgccggtgt cagcctgttt gccgcgctca cgggcttcat cgtggccgtg
     2161 cacacgggtt ccctgttaat cgcgctgagt ctgtcagcgc tgatgggcgt tctcgttgga
     2221 tttttgttct acaacttcag cccggcgcgg gtgttcatgg gcgattcggg gagttacttc
     2281 ctcgggtacg tgctcgcgac cacctcgctg gccggctcgg tgcaacagaa aacttcgacg
     2341 gcggtatcgc tactcgtacc gatggcggcg ctcggcctgc ccatcttcga caccctcttc
     2401 tcgatgctgc gtcgctttct cgagaagcgg ccgctgctct cgcccgaccg gggtcacatc
     2461 caccaccggc tgctcgagct cggcctcacg caccggcgcg ccgtgatcgt gctttatgcg
     2521 gtttccgtcg cgtttgccgc ctgcgcgttg ctcctttcct tcggcgggag ctgggtgaac
     2581 ggcacggcca tcgtcgccgc ggcgctcgtc atcttgggtc tcatgcgagt gacgggctac
     2641 ttcgactacc tgaatcgccg gggccgcagc gaggcgcgta tctacgacgc gctcaccgag
     2701 cggcttcgac gtgcgatacc cgacgtgttg acgggattgc acacggccga tgacgagggc
     2761 gacgccttcc ggctactgcg ccgaacgctg ggcgacgcgg ggtgttcggc gatcgagctc
     2821 cgctccgagg gtcgcgtgat ttatcggttt ccggaagccg cctccgacca gacgggcgcg
     2881 atccgcagat cttaccccgt gggaccggac agcgttgcgc gtgcccaggt cgagttcgtc
     2941 tggcatgttg acgacggcga tcccacgcta caagcgtgcg tcttgcttca gctcgttgcc
     3001 gatgggctcg cccgggcctt cgcccgctgt cgcagcgagc tcgccccggc gccgcttcca
     3061 gatctcgtcc ccagtgaacc gccggcggcc gtcgtcgcca tctccggaac cagccgtcca
     3121 tgagtcagcc ttctctgatc ccgacccctt cacgcgcgtc cgtagcccct tccacccagg
     3181 cgttgcccga ggagggcggc ttcagtctgg agctgctcgc gcgcgcgctg cgaaaaaact
     3241 ggttcttggt cgtactcgcc gtgggtgctt tcgcgctcgg cgcctcgctc tacacctcgc
     3301 gcctcacgcg gatctatcaa gccgtggcga ccgtccagct cgacccgcag ccgttgatgc
     3361 cgctcggcaa tcagctcgga gcgcagaccg gtccggagac ctactggagc aaccaggaat
     3421 acttcgcgac tcagcaccag gtcctcacgt cgcgcaagat cgccgaagcg gtcgtgcgca
     3481 agctcgggct caatcgtgac cacagcttcg tcgccaacac gcgcggcggc ccgacgacga
     3541 acgcagaggt cccggtcgag accgcggccg agatcttgcg cggccgactc gacgtgaagc
     3601 cggtggccga cagccgtctc actcgcgtga cgtatcagga cgccgacccg gcgcgcgcgc
     3661 aacgtatcgc ggctactctc gtcgacgagt acgtcgagca gaacctcgat cgcacgctcg
     3721 actcggcgag ccagcgcgcg gagtggctcg acacgcagct cgtcaaactc aagaccgagc
     3781 tcgagtcgca ggagatggat ctccacgact tcaagcgcaa aaacaacctg ctgagcgtct
     3841 cgttcgacga tcagtcgaac atgctgcggg ccgaaatcca acagctcaac gccgcgctca
     3901 cggagctcaa ggcacgccag gagcgcgtgg cggcaaggct cgcagtgctg caggcaatcg
     3961 acgcgagcaa cccgtctgcg atcccgcaga gcgagctcct cggcgacgtg ctcctcggcg
     4021 cgctgcgcac gaactacatc gatgcgcaaa aggagctgct ccgcctgtcg gcgctcggca
     4081 agggtgaaaa ccatcccgac attcaggcag cggaggtggc ggtggagtcg tcgcgcagtg
     4141 cgctgctcgg ggagctcgag aacatccgca agggctgcgc ggccgatctc gacgccgttc
     4201 ggcgcgagct cgcgggcgtc acgcggctgt acgagacttc gaagtcgcag gcgatggacc
     4261 tgaacctgaa cgaggtgcgc tacgcgcggc tccggcgttc caaggacaac accgagcacg
     4321 tcttcggcgt cgtgctcgag cggtccaccg agagcggcct gtcgaagttg atgccgttca
     4381 acaacgtgcg cgtgctcgat cgcccgctcc agccgagcgc gccgatcctg ccgcgtcccg
     4441 cgctgaacct agcgctcggc gcggcgctcg ggttgctcat cgggctctgc ttcgccgtag
     4501 gacgcgagtt gctcgatcgt accgtccgcg atcccgaaga cgtcgagcgc gagctcggta
     4561 ttccgtcgat cggctcgctg cccgatgtcg ccagtcgcgc gggcctggct gcgctctact
     4621 acggccgcta ctcgcaggag ggcgacaaga agcagagtca ccgccccgac cctgccatcg
     4681 accgcatcgt gcccgagctc ctcgtgcacc actatccgaa gagcgcggcg gccgaagccg
     4741 cgcgcgccat ccgtacgaac ctgcttctta cctcgccgga ccgtccgtac aagacgctgc
     4801 tcgtgacgag cccaggcccg gctgaaggca agaccatggt ggccgcctcg atcgcgatcg
     4861 cgatgagcca gactggccag cgcgtgtgtc tcgtcgattg cgatctgcgg cggccgcgcg
     4921 tgcacaacct attcggcagt ccgatcgagc cgggcgtcac ggtggcgatg ctcgacccga
     4981 gccgcctcga cgaggcgctg atcaagacgg aagcgacgaa cctgtgggtg ctgccagcag
     5041 gcccgacgcc gccgaacccc gcagatttga tgcacagcga agcgttcggt cggttgctgc
     5101 tcgagctcca aagccgcttc gatcgcgtcg tgatcgacag cccgcccgcg tgcgtcgtta
     5161 ccgactcggt cgtgatctcg acccgcgtcg acgcgacgct gctcgtcgtc cgcgcgcgcc
     5221 gtacccgccg cgacgctgca cgccgggctt tgcgcgcgct gagcgatgtc ggcggcgcgc
     5281 tgcccggctt catcatgaac gccgtcacgt cgacgagcga aggctatccg tacacctatt
     5341 acggcaccta cggcgaagac cgcagacatc cgtcccagac gtaacgagcg gttcagctcg
     5401 ctcgcggtcg gagcgggacc tcttgcatca ccagcgcgtt gacgagccag aactccagac
     5461 ccgccgaact catgaacagc ggatagctga agcagagggc gagggcgccg acgctgtacg
     5521 ccgcgatgac gctcgcccag atggcttcgt cgtggccggg caaaaggctc acgcggcagg
     5581 tgtagagaat cgccgcgagg accgcggcca tgtaggcaaa cacgagcggg aggcctccgt
     5641 ccaagagcca gccggcaatc tggatttccg cgccgatctc ctgctccgga gcgccgaagt
     5701 aagcgttgat catgccccag tgaccgagtc ccgcgccgag cggatagcgg ggtaagagct
     5761 cgctgaaagt gtattcgagc atgcggccgc ggttcgcgta gtagacggtg ccgggatcgg
     5821 tcgccacgag cgacgacacg cgggtactca tcatctgacc gccgacgcgg agcgcgaggt
     5881 agaagacgcc gagcgccgcg atgccgacga ggagcgcgaa cgtggtcgca cgcgtggcgc
     5941 ggccagaaat cgacaggagc agcgtcagca cgatgaagca cacgatcagc atcacgagcg
     6001 ccgagcgcac ctgcgacagg tagatgcaca tcaggccgag gcaaatgctg atcgagccgg
     6061 cggcgcgcgc gaagcgaaag ggccggacca gcacgacgcc gctgccgaac agcgcggcgt
     6121 aaagtccgtt catgccggcg cctccgggtg tgtcggtgag gccagccggg cgcagcatcc
     6181 attcgccgga gctcagctga atcatcaaat gcccccgttc cgtcagcgaa gtgaagctcg
     6241 gttcgaattg accagggaaa tagacctgga gcacccccaa gatcgagccg agcgtgtgaa
     6301 aaccccagag caagagcaac acgcgtgcga ccgtaccgcg cgggatgtcg aggcgaccga
     6361 cccacaggag cggcgccatc acggccaagt tgaacgacca atgcgcgatg acgctgagcg
     6421 cggaaccgcc gagcggattg aacatcgcca gcgtttcgat cacgagggcg ccgagccaga
     6481 gtgcgcgctc gatgccccag ttccgcgtcc gaccgggcgc gaggacgaga aacagcagac
     6541 tcgttccgag cgccgcggag cggatgaaga cgcgggcccc cgcgagcgat tcgaccaaga
     6601 gcgcgagctg gctcaagagc tgaacgacga cgtacgtgta cacccagacc gcactgccgc
     6661 cggacgctgg gcgcaggctc gtggtgcgtt ccgcgcgtcc gagtgccgac ggccgctggg
     6721 tgcgcagagc gctttcgacc atcgtggctc ggagcgtgcc acgctcgctc ggagctgcaa
     6781 gcgtttccaa ggggttaccg ccggcttagt gtccggtggg agcgtcctca ttcatcggca
     6841 ggttccggtg agatggcgcg ttgaacggca agaatgcgtt cgtcctggtg gggcgccggc
     6901 tccggctcac gcttgacctg ttgcaatgcc aataaagccg cgctcgtggc acccgccttg
     6961 gctgcggcct cggccacgag cagccagcga tcggccgtgg ggctggcttc ggcagccgcc
     7021 ttgaattggc gcagcgcgag tcccggcgct gcaagctcca ggtacgcgcg gcccgtccgc
     7081 tcgcgcagcg cggcgcacgc caccggatcg ctgcacacga gcgatgcaaa tcggttcgcg
     7141 atgtcgccga gcgtcagcgc gtcacgtgaa cgcaggctca agtcgaaggc ctgagaatag
     7201 caagttgccg cttcggggcg tcccgcgcac tcggcagcga ggatcttggc cgcgcggccc
     7261 tcctcgccct tgagcgagag caggtcggcc cggagctcgg cgagcttcgt ggcggggacc
     7321 tccgagtttt ccaagctggc caatagcgcg agcgcttcgg cgttgcaccg gtcgcgggcg
     7381 tcttccgtgc acggagcgct ccgggccgag agggagcgca cgagcgccat cgcgaggccg
     7441 aggcgagtcg agcttcccgc gtgtcgcgaa agcgcgtcgc gaaagcactc gacgacgagc
     7501 gcgggcacga gccgcgtgca gacttgctcg agcaagtccg agccgggcag atcggcggga
     7561 aacgccgcgt gcaagtcgtc gatcgtgagc acccgcgcgg cgatttgcgt gagcgcgcgg
     7621 tcacgcagcg tgtcgtcgta tacggccgcg agccggctat ggagcagcga ttgccgccgc
     7681 gcgccgcgct gcgcgagcgc gtcgctcaag agtagatgtg tgtcggcgtc gaacggcgaa
     7741 cgctcgagcg cgcggttcaa ccagggcagg gcgtcacgac ccgtgcggat cgcggcggcg
     7801 ccgcccaaga gagggaaata ggcttctcca gggtggcgca gcatgagcgc ccgcagggtc
     7861 ccgtcgaagc tgcccggcgc ggccggcgac ttcccccatg cgacataggc ctcggctgct
     7921 tgccgtcgat cgacttgaac gggattcgag ccggcgaaca cgacgatgag agaccagaac
     7981 acgacggcca gcgaggcagg cagggcaggg cgtagcgtcc gctgcgagct ctgctcgacg
     8041 gcatcatcg
//
LOCUS       DATIML010000119         3575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4933156, whole genome shotgun sequence.
ACCESSION   DATIML010000119 DATIML010000000
VERSION     DATIML010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4933156"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VLJ38_02050"
     CDS             <1..316
                     /locus_tag="VLJ38_02050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38310.1"
                     /translation="GLGYGADFVGQLLADTPLRRVELRTSTGTTADALSYSTYSAAVP
                     VSENVWVELAYKNMDTTGGAVEQRDAASAIVDWRFKRDWSLRTEAGTVGTGIDMLWQY
                     RY"
     gene            428..1981
                     /locus_tag="VLJ38_02055"
     CDS             428..1981
                     /locus_tag="VLJ38_02055"
                     /inference="COORDINATES: protein motif:HMM:NF013438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 8"
                     /protein_id="HSU38311.1"
                     /translation="MRLRSIGFLGAAVLSLLACGQQAEQPSPGSGGRGQGGGSGSATG
                     GANSTGGTGASSAGSGVGGEHAGSGSGGAPEAGHGGSGAAPASGGAGTSATGGSGGVL
                     ASSGSGGLGVAGVSSASGGFANGGMPGSAGMAGSPTGAHYPFPQNQRLSHCTYPTAAN
                     PADVQKAYAAWKTALLTSSGAGGHLRVQRPNSPSAETNSTVSEGIAYGMLIAVALDDE
                     HTFDELWKYSQLWLDSSGLMNWYINAAGTQALGTGGATDADEDMAWALVMADRQWGGK
                     GSLDKPYLDYAKTQIKAIWDHEIDHQNSEFLLAGDTWGGNIIFNASYFAPNEYRVFGA
                     VTNDAANWGHVIDTGYTILGKSLNQTNGNADNGLVPAWCDTSGAPKVPQNGGATNYQY
                     DSARIPFRIGLDYCVSGEARAQTYLAKVSQFFAGVGASKIVDGYDLNGTPHPDPDSAA
                     NGPQSAVFVGSAAVGAMHDVKFQSFVDDAYGLVATGTLLARSSYYNLSWTTLTLALLT
                     GNLVEYPAQ"
     gene            complement(2013..3248)
                     /locus_tag="VLJ38_02060"
     CDS             complement(2013..3248)
                     /locus_tag="VLJ38_02060"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSU38312.1"
                     /translation="MLAHDSGARFLAMLSPSVTTLRIFSLLSSLALAAACSRHTGAAG
                     GPSAATSTARAAPSTSASSNGPLAHGAELYTRYCALCHGKELTGYAADNAPSLVSRTF
                     LDSATDYFISDGIVNGRPGTAMGAYGKGRSGPLDDNDVRALVAFIRSHGGPAKSLPGS
                     SLHGDPVHGSLVYHDECEKCHGSESERKTALSLFNQALLATASPDFLRYAVVNGRPPT
                     PMPSFAKTLPPQDIEDVVAFVTSKRKAPGPPVPQEVPKDLPVVINPKGKPPKFTLRDE
                     RFVSAEQVKQALAEHRRLVIVDARSPADWIAFHIPGAISVPYYQAKELERIPNDGTWV
                     IAYCACPHHASGAIVDALRERKYPHTAVLDEGILFWKANAYPLAGADTATPTPAPPPL
                     PTPAPSAAPSAAPQLKKGP"
     gene            3288..3494
                     /locus_tag="VLJ38_02065"
     CDS             3288..3494
                     /locus_tag="VLJ38_02065"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSU38313.1"
                     /translation="MGTVSPIHWILVAVVLLALFGPKSLAKVGKTAGRGVRAVSDVKK
                     DLSNVPKQILADVTRPSSERQPPG"
BASE COUNT          596 a         1151 c         1266 g          562 t
ORIGIN      
        1 cggcctcggt tacggcgccg atttcgtggg gcagctcctc gccgacacac cgctccggcg
       61 cgtggagctt cgcacgagta cgggaacgac ggccgatgcg ctctcgtatt cgacgtacag
      121 cgcggccgtg cccgtgagcg agaacgtgtg ggtcgagctc gcctacaaga acatggacac
      181 gacgggcggc gccgtcgagc agcgcgacgc ggcgagcgcg atcgtggatt ggcgtttcaa
      241 gcgcgactgg tcgctgcgca ccgaagccgg caccgtgggc accggcatcg acatgctctg
      301 gcagtatcgc tactaaattc cgcgggtgcg gagcagcgcg cgaccgcggg agcgccgcct
      361 tgttcactgc gcgggaatag cgtgcggcgg gcgagcccta aaaaaatgac gtaggctttg
      421 aacacggatg cgcttgcgat cgattggatt tttgggcgcc gctgtcctct cgctcctcgc
      481 ctgtggtcag caggcggagc agccgagccc gggaagcggc ggccgcggtc agggcggcgg
      541 ctcgggctcg gccacgggcg gcgcgaattc aaccggtgga accggcgcaa gcagcgcggg
      601 ttcaggcgtt gggggcgagc acgccggtag cggcagtggc ggcgctcccg aggccggtca
      661 tggcgggagc ggtgcggcgc ccgcgtcggg cggcgccggc acttcggcga cgggcggcag
      721 cggcggcgtg ctggcgagct ccggctcggg cggcctcggt gtggcgggcg tctcgtccgc
      781 gagcggcggg ttcgctaacg gcggcatgcc ggggagcgcg gggatggcgg gctcgccgac
      841 gggcgcgcac tatcccttcc cgcaaaatca acggctctcg cactgcacgt acccgacggc
      901 cgccaatccc gccgacgtac agaaggctta tgccgcatgg aagacggcgc ttttgacgtc
      961 gagcggcgcg ggcggccact tgcgcgtgca gcgcccgaac tcgccgagcg ccgagaccaa
     1021 ctccaccgtc tccgaaggca tcgcctacgg catgctcatc gccgtcgcgc tcgacgatga
     1081 gcacaccttc gacgagctct ggaagtactc gcagctgtgg ctcgattcga gcgggctcat
     1141 gaactggtac atcaacgcgg ccgggacgca ggcgctcggc accgggggcg ccaccgacgc
     1201 cgacgaggac atggcctggg ccctcgtgat ggccgaccgc cagtggggcg gcaaaggctc
     1261 gctcgacaag ccgtatctcg attatgcgaa gacgcagatc aaggcgattt gggatcacga
     1321 aatcgatcac caaaatagcg aatttttgct ggcgggcgac acctggggcg gcaacatcat
     1381 tttcaacgct tcgtacttcg cccccaacga ataccgcgtg ttcggcgccg tcacgaacga
     1441 tgccgcgaac tggggtcacg tcatcgacac cggctacacg atcctcggca aatcgctgaa
     1501 ccagacgaac ggcaacgccg acaacggcct cgtgccggcc tggtgcgaca cgagcggtgc
     1561 gcccaaggtg ccgcagaacg gcggcgccac caattaccaa tacgactcgg cgcgcatccc
     1621 gttccgcatc ggcctcgact actgcgtgag cggcgaagcg cgggcccaaa cctacctcgc
     1681 gaaggtgagt caattcttcg cgggtgtcgg cgcgagcaag atcgtcgacg gctacgatct
     1741 gaacggcacg ccgcacccgg atccggactc cgctgcgaac gggccgcaat cggccgtgtt
     1801 cgtcggcagc gccgcggtcg gcgccatgca cgacgtcaaa ttccagagtt tcgtcgacga
     1861 cgcctacgga ctcgtcgcga cggggacgct gctcgcgcga agcagttatt acaacttgag
     1921 ctggacgacg ctcacgctcg cgctattgac ggggaatctc gtcgagtatc cggcgcagtg
     1981 aggaccagtc gcggctcgct gtgccgcggt ggctatgggc ctttcttcaa ctgaggagcg
     2041 gcgctcggag cggcgctcgg agccggggtt ggtaacggcg ggggcgccgg cgtcggcgtc
     2101 gccgtatcgg ctcccgcgag cggataagcg ttggccttcc agaagaggat gccttcgtcg
     2161 agcacggccg tgtgcgggta cttgcgttcg cgcagtgcgt ccacgatcgc ccctgacgcg
     2221 tggtggggac aggcgcagta cgcgatgacc cacgtgccgt cgttcggaat gcgctcgagc
     2281 tctttggcct gatagtacgg caccgagatc gcgcccggaa tatgaaaggc gatccaatcg
     2341 gcgggcgaac gcgcatcgac aatcacgagg cgccggtgct cggcgagcgc ctgcttcact
     2401 tgctcggcgg aaacgaagcg ctcgtcgcga agcgtgaatt tcggcggctt acccttgggg
     2461 ttgatgacga cgggcaaatc cttcggcacc tcttgcggca ctggcggccc tggcgccttc
     2521 cgcttgctcg tgacgaaggc gacgacgtct tcgatgtcct gcggcggcag cgtcttcgcg
     2581 aacgacggca tgggcgtcgg cgggcgaccg ttgacgacgg catagcggag aaaatccggg
     2641 ctggcggtcg cgaggagcgc ttgattgaag agcgacagcg ccgtcttgcg ctcgctctcg
     2701 ctgccgtgac acttctcgca ttcgtcgtga tagacgagcg agccgtgcac gggatcgccg
     2761 tgcaggctcg agcccggcag tgactttgcc ggtccaccgt gcgagcggat gaaggcgacg
     2821 agcgcgcgca cgtcgttgtc gtcgagtggg ccgctgcggc ccttgccgta ggcgcccatc
     2881 gccgtgccgg ggcgaccgtt gacgatgccg tccgagatga aatagtccgt ggcgctgtcg
     2941 aggaacgtgc ggctcacgag tgagggcgcg ttgtcggcgg cgtaccccgt gagctccttg
     3001 ccgtggcaga gcgcgcaata gcgcgtgtag agctctgctc cgtgagcgag cggtccgttg
     3061 ctgctcgcgg acgtgctcgg tgcggcgcgc gccgtggatg tcgccgctga tggcccgccc
     3121 gcggctcccg tgtgccgcga gcaggcggcg gcgagagcga gcgacgacag gagagagaag
     3181 attcgaaggg tagtgacgga gggcgacagc attgccaaaa accgcgcgcc cgagtcgtgg
     3241 gccagcatgg ccgagcgacg cgagcggagt ataatcagcc gccgcccatg ggaaccgtca
     3301 gccccatcca ttggatcctg gttgccgtcg tgctcctcgc gctcttcggg ccgaagtcgc
     3361 tcgctaaggt gggaaagacc gcgggccgcg gggtgcgcgc cgtctcggac gtcaaaaagg
     3421 atttgtcgaa cgtcccgaag caaatccttg ccgacgtcac gcggccgagc tccgagcgac
     3481 agccgcccgg ctagtctccg gcgcggccag tgagccgcgc tccccgtgtc cgccgcccca
     3541 caccaccggc agcgccgagc acgtaaactc cggat
//
LOCUS       DATIML010000120         6418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_890228, whole genome shotgun sequence.
ACCESSION   DATIML010000120 DATIML010000000
VERSION     DATIML010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6418
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890228"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /locus_tag="VLJ38_02070"
     CDS             <1..873
                     /locus_tag="VLJ38_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HSU38314.1"
                     /translation="LKGTYIDALPALVNPKTGRVHTSWEQTVAATGRLSSTDPNLQNI
                     PIRTVLGRKIRAAFVPPPGMALVSADYSQIELRLLAHLSQDPVLLDAFRTGQDIHQRT
                     AMEVFELKTEQVEREHRTRAKAVNFGIIYGQGESGLAKGLGIARAEAARYIAAYFQRY
                     EGVRRFMNETLEHARAGESVRSLLGRRRLVPAIRSGNRAERLAAERIAMNMPIQGSAA
                     DVLKLAMLALKKPPTPGARMILTVHDELVFEVPETEVEAAKAQIHTAMEHVLELAVPL
                     VVDVGSGKDWNAAH"
     gene            complement(918..2252)
                     /locus_tag="VLJ38_02075"
     CDS             complement(918..2252)
                     /locus_tag="VLJ38_02075"
                     /inference="COORDINATES: protein motif:HMM:NF025042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4147 domain-containing protein"
                     /protein_id="HSU38315.1"
                     /translation="MTAFDLRSVARRLREAALAAVEPALAVARAVHLENERLEVAGRV
                     YELAGFSHVWLLGMGKAGTAMSAALVERLGPRLAGGLVVTLDRQAGSPLGADVQVLEG
                     SHPLPDERSLAAGRAVAAFLQAVSPDDLVILALSGGASALVVLPAGELTLDELRTTTD
                     VLLRSGATIDEVNTVRKHLDVLKGGGLARLARGATLVTLALSDVVGDEPSAIGSGPSV
                     PDPTTFADALQVIERHAVQAALPRSVLERLEQGRAGARPETPKPGDAAFERSVYAVVA
                     SNRLAAEAAAYAARPLGFHSLVLTTRLAGEAREVAQVVAALAREIGEHGRPVRRPGCL
                     VLGGETTVHVRGNGLGGRNQEFALAAALALDGVPDVLVSAFGTDGRDGPTDAAGAVAA
                     GDSVRRGRALGFEAARHLADNDAHRFFAPLGDLIITGPTGTNVSDLVFVLVA"
     gene            2384..4303
                     /gene="htpG"
                     /locus_tag="VLJ38_02080"
     CDS             2384..4303
                     /gene="htpG"
                     /locus_tag="VLJ38_02080"
                     /inference="COORDINATES: protein motif:HMM:NF003555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HSU38316.1"
                     /translation="MSDTVERHEFQAEVKQLLDLMVHSLYSDKDVFLRELVSNASDAL
                     DKLRFERLTDPELGGSDELAIRLEPNPAAHSLSIVDNGIGMTRDEIVKNLGTIAKSGT
                     KEFLSAVRERGGKDMPPELIGQFGVGFYSAFMVAKKIVVVSRRAGSEQATRWESSGDG
                     SYTLGDTERSHSGTTVTLELKPRDEEQDGRDYTDEQVLRRIVKRYSDFVAYPIKLSVW
                     KTPEGAKAGEKVLEDVTLNSLKAIWDRPKSEVSEEEYKAFYRHLSHDWNDPLRTLPIR
                     LEGTLEAYALLYLPARAPFDLYSPEMKRGVQLYVKRVFVLDECKDLVPSYLRFVRGVV
                     DAHDLSLNVSREILQKDRQIQIIKKQLVKRVLATLEEMKREKPEEYAGFWSNFGPVLK
                     EGLLEPGGTDRDKLLELLRAETTHGAEPTTLEDYALRMKEGQSEIYFLLGPTKEAAAQ
                     SPLLESFRAKGYEVLLFSDPVDEIWLDHAPEFKGKALKSVGRGEVELGTVEERQREND
                     ELKQKQETYADLLQALRVHVQDEIKEVRLSSRLTSSPACLVGDEHDMTPRMQRMLEQL
                     GQKAPKVTRILELNPTHPLIEKLESVFKADRNDPRLELYAKLLLGQAHLAESGQVPDP
                     VAFSKVLADVLVRAS"
     gene            complement(4319..5086)
                     /locus_tag="VLJ38_02085"
     CDS             complement(4319..5086)
                     /locus_tag="VLJ38_02085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU38317.1"
                     /translation="MSGETNGSGVHVSIVIPIYNEEGILHSAVVDLRERLAPLGWRYE
                     ILLAENGSRDRTVLVAGELAAKYGEVRVLSTGTPNYGQALRAGLLAARGELVLCDEID
                     LCDVEFHRRAVELLDSGRAEMVIGSKLIAGASDERPFFRHAASLVYTTLLRGLLDFPG
                     TDTHGLKAFVRQRIAPIAESCLTDKDVFASELVIRAYREGLSSLEIPIRVKEKRPPSV
                     NLLNRVPNVLGNLAKLTWAIRGDEIPVSRRARARRSG"
     gene            complement(5083..>6418)
                     /locus_tag="VLJ38_02090"
     CDS             complement(5083..>6418)
                     /locus_tag="VLJ38_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU38318.1"
                     /translation="AQMAVSPTAKGLPVAVLGAGLAGLRAGLELARLGVEHRVFERLA
                     WPGGHATTTFDEGYRFDRTGHLLHLRDPALREQVSEWLAGDLREIARRSVIWSNGVYT
                     RYPFQANTFGLPPAVANECVLDFVKAHFAGPQPAPRDFEQFCLQHFGAGITRHFMLPY
                     NARLWGVAPHEITSAWCERFVPLPTLEDVIAGAVGLNQRELGYNQKFLYPRLGIGELP
                     RAMYRRSAHVELGREPRRIDLDARVLEFDDERVPFDVLISTAPLKALLGLIDPLPSAV
                     FAAAQRLRATHLYYLDLALERQPRTDFHWAYVPEAKYPFYRVGCYSHFSPDVVPPGAG
                     SLYVELADRNEPVLTELLPRVTAALAEMGIIEGPRHVRFARVRRIDCAYVIFDHAYYD
                     ALAVIRPFLAEARILSTGRYGGWQYGAMEDALREGAVAAAESVNLLAGGAAR"
BASE COUNT         1146 a         2204 c         2134 g          934 t
ORIGIN      
        1 ctcaagggca cgtacatcga cgccctgccg gcgctcgtca atccgaagac cggccgcgtg
       61 cacacgagct gggagcagac cgtcgcggcg acgggccgct tgtcgtccac tgacccgaac
      121 ctccaaaata ttccgatccg caccgtgctc gggcgcaaga tccgcgccgc gttcgtccca
      181 ccgcccggca tggcgctcgt gagcgctgat tactcccaga tcgagctcag gctgctcgcg
      241 catctctcgc aagatccggt gctgctcgac gcgtttcgca cgggccagga cattcaccag
      301 cgcaccgcga tggaagtctt cgagctcaag accgagcagg tggagcgcga gcaccggacg
      361 cgcgccaaag ccgtcaactt cggcatcatt tacggccaag gcgagagcgg gctcgccaaa
      421 ggcctaggca tcgcgcgcgc cgaggcggcc cgctacattg ccgcctactt ccagcgctac
      481 gaaggcgtgc gccgcttcat gaacgagacg ctcgagcacg cgcgcgcggg cgaatcggtg
      541 cggagcctac tcgggcggcg ccggctcgtg cccgcgatcc gcagcggcaa tcgcgccgag
      601 cgcctcgccg ccgaacgcat cgccatgaac atgccgattc agggcagcgc ggccgacgtc
      661 ttgaagctcg ccatgctcgc gctcaagaag ccgcccacgc ccggcgcgcg catgatcctc
      721 acggtccacg acgagctcgt gttcgaggtg ccggaaacgg aggtcgaagc ggccaaggcg
      781 cagatccaca cggcgatgga gcacgtgctc gagctcgccg tgccgctcgt cgtcgacgtg
      841 ggcagcggca aggattggaa cgcggcgcac tgacgctact tcgccggtct ttggcagggg
      901 cagatcacta ctaaggctca cgcgacgagc acgaagacga gatcgctcac gttcgtgccc
      961 gtggggcccg tgatgatcaa gtcgccgagc ggcgcgaaga aacgatgggc gtcgttgtcc
     1021 gcgagatggc gcgccgcctc gaagccgagc gcgcggccgc gcctgacgct gtcgcccgct
     1081 gcgacggcgc cggccgcgtc cgtgggcccg tccctgccgt ccgtgccgaa ggcgctcacg
     1141 agcacgtcgg gcacgccgtc caaggcgagc gcggcggcca gcgcgaactc ttgattgcgc
     1201 ccgccgagcc cgttgccgcg cacgtggacg gtcgtttcgc cgccgagcac gaggcagccc
     1261 ggcctgcgca cggggcggcc gtgctcgcca atctcgcgag cgagcgccgc gacgacctgc
     1321 gcgacttcac gtgcctcgcc cgcgagccgc gtcgtcaaga cgagcgaatg aaaaccgagc
     1381 gggcgcgcgg cgtacgctgc ggcctcggcg gcgaggcgat tgctagccac gacggcataa
     1441 acgctgcgct cgaatgccgc gtcgcccggt ttcggcgttt ccgggcgcgc gcccgcacgg
     1501 ccctgttcga gccgctcgag gacgcttcgc ggcaacgcag cttgcacagc gtgccgctcg
     1561 atcacctgga gcgcgtcggc gaacgtcgtc ggatcgggga cgctcggccc cgatccgatg
     1621 gcggaaggtt cgtcaccgac tacgtcgctc agcgccagcg tcacgagcgt tgctccgcgc
     1681 gcgaggcgcg ccagcccgcc gcccttgagc acgtcgaggt gcttgcgcac ggtattgacc
     1741 tcgtcgatcg tcgcgcccga gcgcaagagg acgtccgtcg tcgtgcggag ctcgtcgagc
     1801 gtgagctcgc ccgccggcag cacgacgagc gcggaggcac cgcccgaaag cgcgaggatc
     1861 acgagatcgt cggggctcac ggcttgcaag aaagcagcga cggcgcgtcc cgccgcaagc
     1921 gagcgctcgt cgggcagtgg atggctccct tcgagcacct gcacgtcggc tccgagtggc
     1981 gagccggctt gacggtcgag cgtcacgacg agaccgccgg ccaagcgcgg acccaagcgc
     2041 tcgaccaacg cagccgacat cgccgtaccg gccttcccca tcccgaggag ccaaacgtga
     2101 gaaaagccgg cgagctcgta aacgcgcccc gctacctcga gccgttcgtt ttcgagatgg
     2161 acggcgcgtg ccacggcgag cgcgggttcc acggcggcaa gcgccgcttc gcgaagccgc
     2221 cgagctacgg agcgcaggtc gaaagccgtc atcccgggcg gcgatggtac cgcgatggtc
     2281 ccgttttcgc cggcgaagca cgccttccga cggtttgctc cgtggggctc gaatgcgccc
     2341 gggagcgttg ctaatgtccc tgcccccgaa gaggtaaaaa gggatgagcg acacggtcga
     2401 acgtcacgaa tttcaagcag aagtgaagca gctcttggac ctgatggtcc actcgctgta
     2461 ctcggacaaa gacgtcttct tgcgcgagct ggtctcgaac gcatccgacg cgctcgacaa
     2521 gctccgcttc gagcgactga cggaccccga gctcggcggc agcgacgagc tcgccatccg
     2581 gctcgaaccg aacccggcgg cgcactcgct ctcgatcgtc gacaacggca tcggcatgac
     2641 gcgcgatgaa atcgtcaaga acctcggcac gatcgccaag agcggcacga aagaattctt
     2701 gtcggccgtg cgcgagcgcg gaggcaaaga catgccgccc gagctcatcg ggcaattcgg
     2761 cgtcggcttc tactccgcgt tcatggtggc gaagaaaatc gtcgtggtgt cgcgccgcgc
     2821 cggtagcgag caggccacgc gctgggagtc cagcggtgac ggctcctaca cgctcggcga
     2881 caccgagcgc tcccactccg gcacgaccgt cacgctcgag ctcaagccgc gcgacgaaga
     2941 gcaggacggc cgcgactaca cggacgagca ggtgctgcgc cgcatcgtga agcgctactc
     3001 cgatttcgtc gcctacccga tcaagctcag cgtctggaag acgcccgagg gcgcgaaagc
     3061 cggcgaaaag gtgctggaag acgtgacctt gaactcgctg aaggcgatct gggatcgccc
     3121 gaagagcgag gtcagcgagg aggagtacaa ggcgttttac cggcacctgt cgcacgactg
     3181 gaacgatccg ctgcgtacgc tccccatccg cctggagggc acgctcgaag cgtacgccct
     3241 cctctacttg cccgcgcgtg cgcccttcga tctttacagc cccgagatga agcgcggcgt
     3301 gcagctctac gtgaagcgcg tcttcgtgct cgacgagtgc aaggatctcg tgccgagcta
     3361 cctgcggttc gtgcgcggag tcgttgacgc ccacgatctg tcgctcaacg tttcgcgcga
     3421 gatcctgcag aaggatcgtc agatccaaat catcaagaag cagctcgtca aacgcgtgct
     3481 cgcgacgctc gaggagatga agcgcgagaa accggaggag tacgcgggct tttggagcaa
     3541 cttcggtccc gtgctcaagg aagggctact cgagcccggc ggcaccgatc gcgacaagct
     3601 gctcgagctc ttgcgcgccg agacgacgca cggtgccgag ccgacgacgc tcgaggacta
     3661 cgccctgcgc atgaaagaag ggcaaagcga gatctacttc ttgctcggcc cgaccaagga
     3721 agccgcggcc cagtcgccgc tgctcgagag cttccgcgcc aagggctacg aggtcctgct
     3781 cttctcggat cccgtcgacg agatctggct cgatcacgcg cccgagttca aaggcaaggc
     3841 gctcaagtcg gtcgggcgcg gcgaggtcga gctcgggacg gtggaggagc ggcagcggga
     3901 gaacgacgag ctcaagcaga agcaagagac gtacgccgat ctcttgcagg cgctgcgcgt
     3961 ccacgtgcag gacgaaatca aggaggtccg gctctcctcg cgcctcacct cgtcgcccgc
     4021 gtgcctcgtc ggcgacgagc acgacatgac gccgcgcatg cagcgcatgc tcgagcagct
     4081 cggccaaaag gcgcccaagg tcacgcgcat cctcgagctg aacccgaccc accccctgat
     4141 cgagaagctc gaaagcgtgt tcaaggccga tcggaacgac ccgcggctcg agctctacgc
     4201 caagctcttg ctcggccaag cgcacctcgc cgaatcgggg caagtccccg accccgtggc
     4261 gttcagcaag gtgctcgccg acgtgctggt gcgcgcgagc taggcgcgac tcgaactctc
     4321 agccgctgcg acgagcgcgc gcgcggcggc tgacggggat ctcgtcgccg cgaatggccc
     4381 aggtgagctt cgccaggttg ccgagcacgt tcggcacgcg gttcaacaga ttgacggagg
     4441 ggggccgttt ttccttcacg cgaatcggga tttctaggct cgaaagcccc tcgcggtagg
     4501 cgcggatcac gagctcgctc gcgaacacgt ccttgtccgt gaggcagctc tccgcgatcg
     4561 gcgcgatgcg ttggcggacg aacgccttga gcccgtgcgt gtcggtgccc gggaagtcga
     4621 gcagtccccg caagagcgtc gtgtagacga ggctcgcagc gtggcgaaag aacggccgtt
     4681 cgtcggaagc gccggcgatg agcttcgagc cgatcaccat ctccgcccgg ccgctgtcga
     4741 gcagctccac ggcgcggcga tgaaattcga cgtcgcacag gtcgatttca tcgcacaaaa
     4801 cgagctcacc gcgcgcggcg agcagcccgg cgcgcagcgc ttggccgtag ttcggtgtgc
     4861 cggtcgagag cacgcgcacc tcgccgtatt tggccgcgag ctcgccggcg acgagcacgg
     4921 tgcgatcgcg cgagccgttc tcggcgagca ggatctcgta gcgccagccg agcggagcga
     4981 gccgctcgcg caggtcgacc accgcggagt gcaaaatccc ctcctcgttg tagatgggga
     5041 tgacgatcga gacgtggacg cccgagccgt tcgtttcgcc gctcacctgg ctgcgcctcc
     5101 cgcaagtaga ttcacgctct ccgccgccgc gacggcgcct tcgcgcaggg cgtcttccat
     5161 cgccccgtat tgccagccgc cgtagcgccc cgtcgacagg atgcgcgcct cggcgagaaa
     5221 cggccgaatc accgcgagcg cgtcgtaata cgcgtggtcg aagatgacgt acgcgcagtc
     5281 gatccggcgc acccgcgcga aacgaacgtg acgcggacct tcgatgatgc ccatttccgc
     5341 gagcgccgcc gtcacgcgcg gcaagagctc cgtgagcacc ggctcgttgc ggtcggcgag
     5401 ctcgacgtac aggcttccgg cgcctggcgg cacgacgtcg ggtgaaaaat gggaataaca
     5461 gccgacgcga tagaacgggt atttcgcctc cggcacgtac gcccagtgaa agtccgtgcg
     5521 cggctgccgc tcgagcgcca ggtcgaggta atagaggtgg gtcgcgcgca gccgctgcgc
     5581 ggccgcgaac acggcgctcg gcaagggatc gatgagcccg agcaacgcct tgagcggcgc
     5641 cgtcgagatc agcacgtcga acggcacccg ctcgtcgtcg aactcgagca cgcgcgcgtc
     5701 gagatcgata cgccgcggct cgcgaccgag ctcgacgtgc gccgaacgcc ggtacatcgc
     5761 ccgcggcagc tcaccgatgc cgagccgcgg gtacagaaat ttttggttat agccgagctc
     5821 gcgctgattg agccccacgg cgcccgcgat cacgtcttcg agcgtcggca gcggcacgaa
     5881 acgctcgcac cacgcgctcg tgatctcgtg cggcgcgacg ccccagagcc gcgcgttgta
     5941 cggcagcatg aagtgccgcg tgatgccggc cccgaagtgc tgcagacaaa actgttcgaa
     6001 atcgcgtggc gctggctgcg gccccgcgaa gtgcgctttg acgaaatcga gcacgcactc
     6061 gttcgcgacg gcgggcggca gcccgaacgt gttcgcttga aatgggtacc gcgtgtaaac
     6121 gccgttcgac caaatcacgc tgcgacgcgc gatctcccgc agatctcccg cgagccactc
     6181 ggacacctgc tcgcgcagcg ccgggtcccg caagtgcaag aggtgccccg tgcgatcgaa
     6241 gcggtagcct tcgtcgaacg tcgtcgtggc gtgcccgccc ggccaggcca gacgctcgaa
     6301 cacccggtgt tcgacgccga gccgcgcgag ctcgagcccc gcgcgcaagc ccgcgagccc
     6361 cgccccgagc acggcgacgg gcagtccttt tgccgtcgga gacaccgcca tttgcgcg
//
LOCUS       DATIML010000121         3362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2333876, whole genome shotgun sequence.
ACCESSION   DATIML010000121 DATIML010000000
VERSION     DATIML010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2333876"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1031
                     /locus_tag="VLJ38_02095"
     CDS             <1..1031
                     /locus_tag="VLJ38_02095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38319.1"
                     /translation="YLRSERPGLLYGAAVTTGLAIGTKFPVVPLLVAVLAVGASTLSP
                     YRVRDQLARAFALGLTAVVTFLVTTPAALLEPFKFLELAQYISNRYQHGHYGYTVGLG
                     WDHVYHVLLYFAVNYFSPYLWVSVALSLCVPAGVIVWWRTDRRIALLLVGFALAFLFF
                     FCFHYAAVQVRNYLLLAPFFGLLAARALGALVDWLPHVALRVAVWVALGCAGSANGAF
                     LVRAAESIQHQSVEDDVRQALAYIAARPDSRFRLSSGVQDTASRAHLRVPPNAKGRRF
                     EHVVFFVPSEGPFAFDWPGNDPFAFEQIFGPKEVNIEWYPTWWGSPHLGVMTLDKARG
                     IGVPWLPR"
     gene            complement(1033..2577)
                     /locus_tag="VLJ38_02100"
     CDS             complement(1033..2577)
                     /locus_tag="VLJ38_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38320.1"
                     /translation="MVPVISRAFELVTPPRGTHLWARVSRALGRVWFLALLVAVCFVY
                     RFIGSAGLDEWPVYGSYHDLQADAFLGGHLSLPIEPAPELLHAKNPYDTVNANYWWLD
                     ATFYRGKYYMYWGPVPALCLAVAKWVLGIRHALGDQYVAVAFHCLAFWCGALVVERML
                     RRLFSSTSRWLLALGTLVVACANPTPHGVATASTYQTAIIAAQAWLCAGLIVAFDAVW
                     HAGTPQARWWRLPVAGALLGLAVGSRVSVALAAGCIALFAAVAEASVAPRHVRRFLVA
                     SAWIGAPLAAAGAGLLVYNKLRFDSYLEFGSKLQLTWFPMRFSASYLAANLYSYSLRP
                     GVWSCEFPYLQQVWSMGEAAFPRGFTRPSDYLVLEPIVGWLRALPITWLAPFAFLFAP
                     RPSSSPRARSFFFCLLSFVALASVSGVLPLFVYTGTMRYLADVTCGLVFLGLLGAFSL
                     GFHRFGAASPRAAWTLIGALAGATIVMGLLLGYQGYNQHFHRFNPALDKKIVHALSLC
                     HSPALP"
     gene            2698..>3362
                     /locus_tag="VLJ38_02105"
     CDS             2698..>3362
                     /locus_tag="VLJ38_02105"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU38321.1"
                     /translation="MIRELFERPKAPVWPKPRVTLLEHEKEALERWYQLWMPSFHKNF
                     GLVHRFNHHFVAKLPLPGGRNGRVNTLEIGGGSGDHMRVEDLSQQDYHSLELRKEFVA
                     MMNASLGEGRCLLGDIQAGAPWPDGHFDRVIAIHVLEHLHDLPAALKEVERLLRPGGV
                     FDVVLPCEGGALYRVAREFSSKRLFEKHFDVSYDKIIKSDHVNTYADVEYELERAFDA
                     QEK"
BASE COUNT          618 a         1097 c         1120 g          527 t
ORIGIN      
        1 cttacctacg cagcgaacgc ccgggcttgc tctacggtgc cgccgtgacg actggtttgg
       61 ccatcggcac caaattcccc gtcgtgccgc tgctcgtggc ggtcctcgcc gtgggcgcct
      121 cgaccctgtc gccgtatcgc gtgcgcgatc agctcgcgcg cgccttcgct ctcggtctca
      181 cggcggtcgt gaccttcctc gtgacgacgc cggcggcctt gctcgagccg ttcaagttcc
      241 tcgagctcgc tcagtacatc tcgaaccgtt accagcacgg tcactacggc tacacggtcg
      301 gtctcggctg ggatcacgtg tatcacgtgc tgctctattt cgcggtcaac tacttctcgc
      361 cgtatctgtg ggtctccgtc gcgctttcgt tgtgcgtgcc cgccggcgtc atcgtctggt
      421 ggcgaacgga tcgccgcatc gcgctcttgc tcgtcgggtt cgcgctcgcg tttctgttct
      481 tcttttgctt ccactacgcg gcggtgcagg tgcgaaatta cctgctgctc gccccgttct
      541 tcggcttgct cgccgcgcga gcgctcggcg cgctcgtcga ttggttgccg cacgtcgcac
      601 tgcgcgtcgc cgtttgggtc gcgctcggtt gcgccggcag cgcgaacggc gcgttcctcg
      661 tccgcgccgc ggagagcatc cagcaccaga gcgtcgagga cgacgtgcga caagcactcg
      721 cgtacatcgc cgctcgaccg gactcacggt ttcggctctc gagcggagtc caggacaccg
      781 cctcgcgggc gcacctgcgc gtcccgccga acgcgaaagg acggcgcttc gagcacgtgg
      841 tcttcttcgt cccgtcggaa gggccgttcg ccttcgattg gccgggcaat gatccgttcg
      901 cgttcgagca gatttttggc ccgaaagagg tcaacatcga gtggtacccg acgtggtggg
      961 gttccccgca cctgggcgtg atgacgctcg acaaggcgcg cggcatcggc gtgccgtggc
     1021 ttccgcgctg aatcacggca acgcaggcga gtggcacagc gagagcgcgt gcacgatctt
     1081 cttgtcgagg gccggattga agcggtgaaa gtgctggtta tagccctggt agccgagcag
     1141 cagtcccatc acgatcgtcg cgccagcgag tgcaccgatg agcgtccagg cggcgcgcgg
     1201 ggacgccgcg ccgaagcgat ggaacccgag ggagaacgca ccgagcaagc cgagaaagac
     1261 gaggccgcac gtcacgtcgg cgaggtagcg catcgtgccc gtgtaaacga agagcggcag
     1321 gacaccgctc acggacgcga gcgcgacgaa cgacagcaga cagaagaaga agcttctcgc
     1381 gcgcggtgag gacgacgggc gtggcgcgaa caagaacgcg aacggcgcga gccacgtgat
     1441 cggcagggcg cgcaaccagc cgacgatcgg ctcgagcacc aagtagtcgc tcggacgcgt
     1501 aaaaccgcgt gggaacgccg cttctcccat gctccagact tgctggaggt acgggaactc
     1561 gcacgaccag acgcccggcc gcaagctgta ggaatagagg ttcgccgcca ggtagctcgc
     1621 cgagaaccgc atgggaaacc aggtgagctg gagcttcgag ccgaactcca agtaactgtc
     1681 gaagcggagc ttgttgtaga cgaggagtcc tgcgccagcc gcggcgagcg gcgctccgat
     1741 ccacgccgac gcgacgagga accgacgaac gtgccgcggc gcgaccgacg cctccgcgac
     1801 ggcggcaaag agcgcgatac agcccgcggc gagcgcaacg ctcacgcgcg atcccaccgc
     1861 gagcccgagc agcgcaccgg cgacgggcaa gcgccaccag cgcgcctgcg gagtgccggc
     1921 gtgccagacg gcgtcgaacg ccacgatcaa gccggcacaa agccaagctt gagccgcgat
     1981 gatcgccgtc tggtaggtgc tcgccgtggc gacgccgtgc ggcgtcggat tggcgcaagc
     2041 gaccacgagc gtcccgagcg cgagcagcca gcgcgacgtg gacgaaaaca gccgccgcag
     2101 catgcgttcg acgacgagcg cgccgcacca gaacgccaaa caatggaacg ccacggcgac
     2161 gtactgatcg ccgagagcat gccggatccc gagcacccac ttggcgacgg ccaggcatag
     2221 cgcggggacg ggcccccaat acatgtagta cttgccgcga tagaacgtcg cgtcgagcca
     2281 ccagtagttg gcgttgacgg tgtcgtaagg atttttggcg tgcaggagct cgggcgcggg
     2341 ctcgatgggc aacgacagat ggccgcccaa aaacgcgtcg gcttgtaagt cgtgatagct
     2401 gccgtaaacg ggccattcat ccaggcctgc ggagccgatg aagcggtaga cgaagcagac
     2461 agccaccagg agcgcgagaa accacacgcg accgagcgcg cggctcacgc gtgcccaaag
     2521 gtgcgtaccg cgcgggggcg tgacgagctc gaacgctctc gaaataacgg ggaccaagga
     2581 ggatgacgcg cgggggcgat gggggctcgg gttgctcgac gcgagtctgc cacacggctt
     2641 gcccgatccc tacggcgcga ccgcgggatc ccgtgctaga ccaccgtcga gccagccgtg
     2701 atccgcgaac ttttcgaacg cccgaaggcg cccgtctggc caaagccgcg cgtcacgctg
     2761 ctcgagcacg aaaaagaggc actcgagcgc tggtaccagc tgtggatgcc gagctttcac
     2821 aagaacttcg gcctggtcca tcgcttcaac catcacttcg tggccaagct gccgctgccc
     2881 ggcggccgca acggtcgcgt gaacacgctc gagatcggcg gcggcagcgg cgaccacatg
     2941 cgcgtcgagg atctttcgca gcaggactat cactcgctcg agctccgcaa agagttcgtc
     3001 gcgatgatga acgcgagcct cggcgaggga cgctgcctgc tcggcgacat ccaggcaggc
     3061 gcgccctggc cggacgggca cttcgatcgc gtgatcgcga ttcacgtgct cgagcacctg
     3121 catgatttgc ccgcggcact gaaagaggta gagcggctgc tacgtccggg cggcgtcttc
     3181 gacgtcgtct tgccgtgcga aggcggcgcg ctctatcgcg tcgcccggga gttctcctcg
     3241 aagcggctgt tcgaaaagca cttcgacgtg tcttacgaca agatcatcaa gagcgatcac
     3301 gtgaacacgt acgcggacgt cgagtacgag ctcgagcggg cgttcgatgc tcaggaaaag
     3361 ca
//
LOCUS       DATIML010000122         1670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2912970, whole genome shotgun sequence.
ACCESSION   DATIML010000122 DATIML010000000
VERSION     DATIML010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2912970"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VLJ38_02110"
     CDS             complement(<1..390)
                     /locus_tag="VLJ38_02110"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSU38322.1"
                     /translation="MSKRQNGEKNGAARPKGFQLGPGVWTRLRYRVFDAEGELVEGSG
                     GEISFVFGYGTLLPALESALEGLAAGATRNVELSARDAYGERRPQLEMEIAREDFPPD
                     VAAGDRFELEREDGTEVVVRVLGVSDEG"
     gene            complement(387..>1670)
                     /locus_tag="VLJ38_02115"
     CDS             complement(387..>1670)
                     /locus_tag="VLJ38_02115"
                     /inference="COORDINATES: protein motif:HMM:NF012550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HSU38323.1"
                     /translation="RFSHEYVTPMADALLRRAFGDAARVAEPDSVLLFRDHLTFASEV
                     LSENAQRLPLLRQAELLPQVQAEFAARHAVRLFGEVEDPERRGSVAICHEAVLESFAE
                     PGSVIVGTDSHTSTAGAVGCLAFGVGSTDMAAAWLTRDARLRVPETVRVELAGRLGPA
                     VTAKDVMLTLFATPLVQSGGATGRVLEFGGAGLATLPLDERATLANMAVEAGALTGIV
                     ECDERALGELAALRGVDAERWRSRMLRADSGACYAALVRLELGAIEPMLALPGDPKHV
                     RALAEVVASGAPPRIDIAYAGSCTGGKRRDMDLYAAVLGPAAARGERVAPGVRLFVQT
                     GSEYVRRYAEERGYLAIFERVGATVLGSACGACIAAGPGTSSSADEVTISAGSRNFPG
                     RSGPGRVFLASPLVVAASALAGVVACPRPEIGGQV"
BASE COUNT          265 a          627 c          537 g          241 t
ORIGIN      
        1 accttcgtct gaaactccga gcacccgtac caccacctcg gttccgtctt cccgttcgag
       61 ctcgaagcgg tcgccggctg cgacgtccgg cgggaaatct tcccgggcaa tttccatttc
      121 gagctgtggc ctgcgctcac cgtaggcgtc gcgcgccgaa agttcgacgt tgcgcgttgc
      181 gcccgcggcg agaccttcga gtgccgactc gagtgcgggc aacagcgtgc cgtagccgaa
      241 aacgaagctt atctcgcccc cactcccctc caccagctcg ccttcggcgt cgaagacccg
      301 atagcgcagg cgggtccaca cgcctggccc gagctgaaaa cctttcggtc tcgcagcgcc
      361 gttcttctca ccgttttgcc gtttgctcat acctgaccgc cgatctcggg tcgggggcat
      421 gccacgactc cagcgagcgc gctcgctgcg acgacgagag gactcgcgag gaacacccgc
      481 cctgggccgc tccggcctgg gaaattgcgg ctgcccgcgc tgatcgtgac ctcgtccgcc
      541 gagctcgacg tgccgggacc ggcagcgatg cacgcgccgc acgcggagcc gagcacggtg
      601 gcaccgacac gctcgaagat ggcgagatag ccgcgctcct ccgcgtagcg ccgcacgtac
      661 tccgagcccg tctgtacgaa aagtcgcacg cccggcgcaa cgcgctcacc gcgcgcggcc
      721 gcaggcccga gcaccgccgc gtataggtcc atgtcgcggc gcttaccacc cgtgcacgag
      781 ccggcgtagg cgatgtcgat acgcggcggc gcgccgctcg cgacgacttc ggccagcgct
      841 cggacgtgct tcggatcacc gggcagcgcg agcatcggtt cgatggcgcc gagctcgagc
      901 cgcacgagcg ccgcgtagca cgcgccggag tcggctcgca gcatacgcga acgccatctt
      961 tcggcgtcga caccgcggag cgccgcgagc tcgccgagcg cgcgctcgtc gcactcgacg
     1021 atacccgtga gcgcgcccgc ctcgaccgcc atgttcgcga gcgtcgcgcg ctcgtcgagc
     1081 ggcagcgtgg cgaggcctgc gccgccgaat tcgagcactc ggcccgtagc tccgccgctc
     1141 tgcacgagcg gcgtcgcgaa caacgtgagc atcacgtcct tggccgtaac cgcaggcccg
     1201 aggcgtccag cgagctcgac gcggaccgtc tccggcacac gcaagcgagc gtcacgcgtc
     1261 agccaggccg ccgccatgtc cgtgctgccg acaccgaagg ccaagcagcc gacggcgccg
     1321 gccgtcgagg tgtgcgagtc cgtacccacg atcacactgc ccggctccgc gaacgactcg
     1381 agcaccgcct cgtgacagat cgcgacgctc ccgcgacgct ccgggtcttc gacttccccg
     1441 aacagccgaa ccgcgtggcg cgcggcgaac tccgcctgca cctgcggtag gagctcggcc
     1501 tggcgtaata acggcaagcg ttgcgcgttc tcgctcagga cctcgctcgc gaacgtcagg
     1561 tgatcgcgaa agagcagcac gctgtccggc tcggcgacac gcgcggcgtc gccgaatgcg
     1621 cgccgtaaga gcgcgtccgc catcggcgtc acgtactcgt ggctgaagcg
//
LOCUS       DATIML010000123         4367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1757411, whole genome shotgun sequence.
ACCESSION   DATIML010000123 DATIML010000000
VERSION     DATIML010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4367
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1757411"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VLJ38_02120"
     CDS             complement(<1..454)
                     /locus_tag="VLJ38_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38324.1"
                     /translation="MTESSRLAATLGGLSLATDLVAGLPSETALRTATLAGQIGRELG
                     LTASAVSDVFYAALLRFVGCSAFAHETAALGGGQDQALLRSLTPTDAARPRSVFLHAG
                     RGMGRRRARVLVNLVTHPSTPLALARAHCDLATQLAARLGASENVVTAL"
     gene            complement(560..1516)
                     /locus_tag="VLJ38_02125"
     CDS             complement(560..1516)
                     /locus_tag="VLJ38_02125"
                     /inference="COORDINATES: protein motif:HMM:NF007214.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-70 factor"
                     /protein_id="HSU38325.1"
                     /translation="MTAPDTFESLRPLLFSIAYRMLASVSDAEDIVQDAYLRYQHALE
                     RGVRVESTKSYLSALVTRLAIDSLRSARAKRESYVGQWLPEPVLGDGGDPLSDSERAE
                     TISMAFLLLLQRLRPVERAVVLLHDVFGYGFGEIAPMVGKSEDHCRQLALRARKHLET
                     ERPRFDPSTEVKNELAGRFFAAVHDGNLDALMQLIARDAVVYGDGGGKAPQWSKPIAG
                     RERVAELLVGVGTRLAQIGAAIELRCINGQPGALVFDRDSALINVFAVDIADGAVRTV
                     RSVINPDKLRHLGPLADIQALLQQLRTKPGAFAPPSADRERR"
     gene            complement(1531..2496)
                     /locus_tag="VLJ38_02130"
     CDS             complement(1531..2496)
                     /locus_tag="VLJ38_02130"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU38326.1"
                     /translation="MRIFVAGATGAIGRRLVPALIARGHQVIAATRHAAKGGPLRALG
                     AEVAVVDGLDAAAVGEAVARAAPDAIVHQMTALAGVPDFRHFDHWFSGTNALRTRGTR
                     HLLAAARATGVRQFVAQSYTGWTNIRSGGPRKTEDDQFDPSPAKAQTETMLAIQGLEK
                     AVLEAPLASVVLRYGSFYGPGASDGLVELVRRRRMPIIGDGAGVWSWIHLDDAASATI
                     AALEHGLTGIYNVTDDEPAAVAEWLPYLAEVVGAKRPLRVPVWAGRLLAGEVVTRMMT
                     EVRGSSNEKLRRAVDWQPRWRTWRDGFRFALGDRSVAAGAASRAA"
     gene            complement(2586..3026)
                     /locus_tag="VLJ38_02135"
     CDS             complement(2586..3026)
                     /locus_tag="VLJ38_02135"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSU38327.1"
                     /translation="MDNVIASVPTLPRLEHNPKALVWTGRVLSGFIVAFLLVDAAGKL
                     LALRPYVEGTQKAGYDVGLLPALGLVLLIPTLLHLIPRTRFFGALLLTAYFGGAVATH
                     VRMGTACWFPVVFCVILWVAYAMRSARLRAFLLSTCREPGTPAR"
     gene            complement(3241..3492)
                     /locus_tag="VLJ38_02140"
     CDS             complement(3241..3492)
                     /locus_tag="VLJ38_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38328.1"
                     /translation="MNYEPDSDQDLSIQQCDPVAKAAEGRVRCRVLRGDTSLGEFVLV
                     RSDDGWLPIPVPGALHEGLLHTTAIDFARELNEGRVTLD"
     gene            complement(3489..4073)
                     /locus_tag="VLJ38_02145"
     CDS             complement(3489..4073)
                     /locus_tag="VLJ38_02145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38329.1"
                     /translation="MTIYGGLLFLHVLAAMALAAALLGEHLALGFVRAASSGPELRRA
                     LGALRPPLRLGIGAMLTLVLSGGALMKMSWGAAPWLLVALGLLAALPVLGLLTARRLR
                     TLLRASADAHTAERVLAGLEPRKASVLELSLRLRVLTVVGIVFLMTVKPAPAAAFAAA
                     CVAAAIGLLAVAVGSREAAGRTRATAVGRGRSGA"
     gene            complement(4070..>4367)
                     /locus_tag="VLJ38_02150"
     CDS             complement(4070..>4367)
                     /locus_tag="VLJ38_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38330.1"
                     /translation="LYFGGASAELMRALFPPPRYELPNDFAFELSGVLQFVIALPAAR
                     DIVPLVAWLWSTKPPSAPSPGAPAAGNPRATGLVARPELVNELAGAPALARRAS"
BASE COUNT          754 a         1471 c         1485 g          657 t
ORIGIN      
        1 cgagcgccgt gaccacgttc tcgctcgcgc ccaggcgcgc ggcgagctgc gtcgcgagat
       61 cgcaatgcgc acgggcgagc gcgagcggcg tactcgggtg cgtcacgagg ttcacgagca
      121 cgcgcgcgcg cctgcgtccc atcccgcgcc cggcgtgcaa gaagacgctg cgcgggcgcg
      181 ccgcgtcggt gggcgtgagg ctgcggagca gcgcctggtc ttgaccgccc ccgagcgcgg
      241 ctgtttcgtg cgcgaacgca ctgcagccga cgaagcgtag gagagccgcg taaaacacgt
      301 ccgaaaccgc ggacgcagtg agcccgagct cacggccgat ctgcccagcg agcgtcgccg
      361 tacggagcgc cgtttccgaa ggcaggcccg cgacgagatc ggtcgccaat gaaagaccgc
      421 cgagcgtcgc cgcgagtcgt gagctctcgg tcacggcgag gttctcgcgt ccgaatcgcc
      481 cgagcctccg cgctctctcc cgctgggcgt actcgccgtt atcgccatgg ctcaccctcg
      541 caaggcgagc ccacggccgt caacgccgct ctcggtcggc ggaaggaggg gcaaacgcgc
      601 cgggcttcgt gcgtaactgc tggagcaagg cttggatatc ggcgaggggg ccgaggtggc
      661 gcagcttgtc ggggttaatg acggaacgca cggtacgcac ggcgccgtcg gcaatatcca
      721 cggcgaacac gttgatcaag gcgctgtcgc gatcgaacac cagggcaccc ggttgcccat
      781 tgatgcagcg aagctcgatg gctgcgccga tttgcgccag gcgagtgccg acgccgacga
      841 ggagctctgc gacgcgctcg cggccggcga tgggcttcga ccactgcggc gctttgccgc
      901 cgccgtcgcc gtagacgaca gcgtcgcgag cgatcagctg catgagcgcg tcgaggttac
      961 cgtcatgcac ggcggcgaag aaccgtccgg cgagctcgtt cttcacctca gtgctcgggt
     1021 cgaagcgcgg cctttcggtc tcgaggtgct ttcgcgcccg caacgcgagt tgccggcaat
     1081 ggtcctccga cttgcccacc atgggcgcga tctcgccaaa gccgtagccg aatacgtcgt
     1141 gtagcaagac cacggctcgt tccacggggc gcaggcgttg caacagcagc aggaaggcca
     1201 tcgaaatcgt ttccgctcgt tcggaatcgg acagcgggtc gccgccgtcg ccgaggacgg
     1261 gctcgggcag ccactgtccg acgtagctct cgcgcttggc gcgcgccgag cgcaaggaat
     1321 cgatcgccaa gcgcgtcacc agcgccgaaa ggtacgactt ggtcgattcg acacggacgc
     1381 cccgctcgag ggcgtgctgg tagcggaggt aggcatcttg gacgatgtcc tcggcgtcgc
     1441 tgacgctcgc gagcatgcga taggcaatcg agaagagcag gggtcgcaga ctctcgaagg
     1501 tgtctggcgc ggtcatggtc tcggcaagcc ttacgcggcg cgcgacgcag ctccagcagc
     1561 gaccgaccga tcgcccagag cgaagcgaaa tccgtcgcgc cacgtccgcc accgcggctg
     1621 ccaatcgacc gcgcggcgga gtttttcgtt cgacgagcct cgcacctccg tcatcatccg
     1681 tgtcaccact tcgccggcga gaagtctccc ggcccaaacg gggacgcgca gcggccgctt
     1741 tgccccgacg acttccgcga gatagggcag ccactccgcc acggcggcgg gctcgtcgtc
     1801 ggtcacgttg taaatacccg tcagtccgtg ctccagcgct gcaatcgtcg cgctggccgc
     1861 gtcgtccagg tggatccagg accacacgcc ggccccatcg ccgatgatcg gcattctgcg
     1921 ccggcgaacc aattccacca aaccatcgga cgcgcccggc ccgtagaaac tgccgtatcg
     1981 cagcacgacg cttgcgagcg gcgcttcgag cacggctttt tccaagcctt ggatcgcgag
     2041 catggtctcg gtctgcgctt ttgccgggct cggatcgaac tggtcgtctt ccgtcttccg
     2101 cggccctccg ctccggatgt tcgtccagcc tgtgtaactc tgagccacga actggcggac
     2161 gccagtcgcg cgcgcggcgg cgagcagatg ccgggtgcct cgggttcgaa gcgcgttggt
     2221 cccggagaac cagtggtcga aatgtcggaa atcgggcact cctgcgagcg ccgtcatctg
     2281 gtgcacgatc gcgtccggcg ccgcgcgggc gaccgcctca ccgacggcag cagcgtccaa
     2341 gccgtcgacc acggcgacct cggcgcccag agcgcgtagc gggccgcctt tcgccgcgtg
     2401 tcgtgtggct gcaatgacct gatgccctcg agcgatgagc gccggcacga ggcgccgtcc
     2461 gattgctccc gttgctcctg cgacgaagat ccgcatggtt cttctcctgg tttgggctcg
     2521 gctcgagccg aatttacccc gagacgaagc agcggccgct ggcgtgacag tcgtcgccca
     2581 tttttctatc gcgcaggcgt gccaggttca cgacaggtgg agaggaggaa tgcacgcagg
     2641 cgtgctgagc gcatggcgta ggcgacccaa aggatcacgc agaagacgac cgggaaccag
     2701 catgctgtgc ccatgcgcac gtgcgtggcg accgcgccgc cgaagtatgc ggtgagcagc
     2761 agggcgccga agaaccgcgt ccgcgggatg agatgaagca gggtggggat caggagcacc
     2821 aagccgagcg ccggcaggag cccgacgtcg tacccggctt tctgcgtgcc ctccacgtac
     2881 ggccgcagag caaggagctt gccggcggcg tcgacgagca aaaacgccac gatgaatccg
     2941 ctgagtacgc ggcctgtcca gaccagcgct ttcgggttgt gctcgagccg cggcagcgtg
     3001 ggaacggatg caataacgtt gtccatgaat catctccggt tcgtgagtgg attggccccg
     3061 gcgctttgcc ggggtcttca tgaacacgtc gacggccacg tcctcggatc gacacggctc
     3121 gatatctttt tgtaaatatc tgtcgggctc gcgcccgtct tttcgaaaac cgcactccga
     3181 cgtctgcaca gaaggatgga agactacggc ggctatggga cgtgcgcgta ctgggatcgg
     3241 ctagtcgagg gtgacgcggc cctcgttgag ctcacgcgca aagtcgatcg cggtcgtgtg
     3301 cagcaagccc tcgtggagcg cacccggcac cggaatcggc aaccagccat cgtcagaacg
     3361 tacgagcacg aactcaccga gtgaagtgtc gccgcgaagc acgcggcagc gcacgcgtcc
     3421 ttccgcagcc ttcgcgaccg gatcacactg ctgaatcgag aggtcctggt cgctgtccgg
     3481 ctcgtagttc atgccccgct cctaccacgg ccgacagccg tagcccgggt cctgcccgct
     3541 gcttcgcgag atccgaccgc taccgccagc agcccaattg cagcggcgac gcacgcggcc
     3601 gcgaacgcag cagccggcgc cggcttgacc gtcatcaaga acacgatgcc gacgacggtg
     3661 aggacgcgga ggcggagcga gagctccagg acggaagcct tccggggctc gagcccggcg
     3721 agcacccgct ccgccgtgtg cgcgtccgcg ctcgcgcgga ggagcgtgcg caggcggcgt
     3781 gccgtcaaaa ggccgagcac cggcagggcc gcgagcagcc cgagcgcgac gagcaaccat
     3841 ggcgccgcgc cccagctcat tttcatcagc gccccgcccg aaagcacgag ggtcagcatt
     3901 gctccgattc cgaggcgtag cggcggacgc aacgcgccga gagctcgtcg cagctcaggg
     3961 ccgctcgacg cggcgcgtac gaagccgagt gccaagtgct cgccgagcag cgccgccgcc
     4021 aaggccatgg ccgcgaggac gtgcaggaac aacaggccac cgtaaatggt catgacgccc
     4081 tccgagcgag tgctggcgct cccgcaagct cgttgacgag ctcggggcgc gcgacgagcc
     4141 ccgtggctct cgggtttcca gctgctggcg cgcccggcga gggcgccgag ggcggcttcg
     4201 tgctccacag ccaggcgacg agcggcacga tgtcgcgggc cgcgggcaag gcgatcacga
     4261 actgaagcac gccgctgagc tcgaacgcga agtcgttcgg gagctcgtag cgcgggggcg
     4321 ggaagagagc gcgcatcagc tctgcggatg cgccaccgaa gtacagc
//
LOCUS       DATIML010000124         3735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1180294, whole genome shotgun sequence.
ACCESSION   DATIML010000124 DATIML010000000
VERSION     DATIML010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3735
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1180294"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..588)
                     /locus_tag="VLJ38_02155"
     CDS             complement(<1..588)
                     /locus_tag="VLJ38_02155"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HemK/PrmC family methyltransferase"
                     /protein_id="HSU38331.1"
                     /translation="MAAAEPERPQGEERASEPWTIARVLKWAADDFRKRQNPSPRLDA
                     ELLLAHALESDRIRLVLDSERQLGNAELGRYRELIRRRRSGEPIAYILGRREFYGLSF
                     AVDRRGLVPRPDTEPLVEVALERTRARSMHGVALDLCTGTGCVAIAFAKARPTWRVTA
                     SEVALETAELAWENVRRLGVAFSVAVAVGDLFAPVA"
     gene            complement(591..1967)
                     /locus_tag="VLJ38_02160"
     CDS             complement(591..1967)
                     /locus_tag="VLJ38_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HSU38332.1"
                     /translation="MSAHVFREYDIRGHAERDLGDAFVERVGRSLAELLRADGAARPP
                     RIAVGRDCRLSGSRLFDALSAGLIAGGAQVLDVGVGPTPKLYFSVHHLNADGGVMLTG
                     SHNPAEDNGMKIMRGRGSFFGTALQELRELALGPALPRVTGGSVQTESVDDAYVARLI
                     EGMTPNAGTLKVVADAGNGAAGPLGLRALNALGYRPVALYCDMDGRFPNHHPDPTVPQ
                     NLTDLIARVRSEHAQVGVAWDGDGDRLGVVDATGEIVWGDRLLALFSRGILARTPGAT
                     VIADVKCSQALFDDVARHGGRPIMWKTGHSLIKTKMKEEHAAVAGEMSGHFFFADRYL
                     GYDDGIYAALRLLEILAQSGRTVLEELSDLPASFHTPEIRVDCPDALKFEVVERVRDR
                     LKDRGKINALDGVRVTYTDGAWSLVRASNTGPIIVLRFEAPSAERLESIKQEVEAVVH
                     EARAASGG"
     gene            complement(2103..2864)
                     /locus_tag="VLJ38_02165"
     CDS             complement(2103..2864)
                     /locus_tag="VLJ38_02165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_function: GO:0120153 - calcium-dependent carbohydrate
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lectin domain-containing protein"
                     /protein_id="HSU38333.1"
                     /translation="MTSALARMYRTQARRELALAALVALTLAGCPLSDHYYIDDTLGR
                     GGAAAAGGGTAGAFAATGGTGDTMHQGCVPSPEACDGVNNDCDAGACPPGCSAQQRNG
                     HVYLLCLAPSAAMGVNYATAGMRCGSAAGELGLTVHLKLAVVESADEDAFLKDWIANV
                     APPTSSVWLGANDSAKEGTWVWGDGPQAWPFFHVGPMGGGMPDPGKYADFAPGTPNGA
                     QSDEDCAAFDGSLDWQWNDERCSEPLAGYLCEQNP"
     gene            complement(2861..>3735)
                     /locus_tag="VLJ38_02170"
     CDS             complement(2861..>3735)
                     /locus_tag="VLJ38_02170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38334.1"
                     /translation="SGRLGVAGDLQPGQHVAHEQRDFEHALVLFERAGEIIPAPTITL
                     MEARTLVELGRLVEALERYAATEHMLALDPDNQAYRDAAEAAERETQPLLERIPTLRV
                     HVGGAVVGETLEISVDQKNVQPALAAIDRPSDPGPHRVDVRTSLGRSATREFTLGERA
                     HEDIELTLGPLAPPPPPPAQAPRARDSNPGKTAGWALVISGAAFTGVGALTGVMALNH
                     KSELDAVCAPGCPPSSSDTLEAYRRNRAISYTSFVVGGLAAAGGAYLVLTHPARKLAL
                     YVTPNLVALGGSFR"
BASE COUNT          570 a         1257 c         1344 g          564 t
ORIGIN      
        1 cgcgaccggc gcgaacaagt cgccgaccgc gacggccacc gaaaacgcga cgccgagccg
       61 ccgcacgttt tcccacgcga gctcggccgt ctcgagcgcg acttcgctcg cggtcacgcg
      121 ccaggtcggg cgagccttgg cgaacgcgat cgcgacgcag cccgtgccgg tacaaagatc
      181 gagcgcgact ccgtgcatcg aacgggcgcg cgtgcgctcg agcgcgactt cgacgagcgg
      241 ttcggtgtct gggcgcggca cgaggccccg gcgatcgacg gcgaaggaca acccgtaaaa
      301 ttcgcgacgc ccgaggatgt acgcgatagg ctccccgctc ctgcgccgcc ggatgagctc
      361 acgataacgc ccgagctcgg cgttgccgag ttgacgttcc gaatcgagca cgagccggat
      421 gcgatcgctc tcgagcgcgt gcgcgagcaa gagctcggcg tcgaggcgcg ggctcgggtt
      481 ctgacgcttg cgaaagtcgt ccgcggccca tttgagcacg cgcgcgatcg tccacggctc
      541 gctcgcgcgc tcttcgccct gcgggcgctc gggctcggcc gccgccatcg tcagccgccg
      601 ctcgcggccc gcgcttcgtg caccacggct tcgacttctt gcttgatgct ctcgagccgc
      661 tcggcgctcg gcgcctcgaa gcgcagcacg atgatggggc cggtgttgga agcgcgcacg
      721 agcgaccagg cgccgtcggt gtacgtcacg cgcacgccgt cgagcgcgtt gatcttgccg
      781 cggtccttca ggcgatcgcg cacgcgctcg acgacctcga atttgagcgc gtcggggcaa
      841 tccacgcgga tttccggggt gtggaacgaa gccggcaagt cactgagctc ctcgagcacg
      901 gtgcggccgc tctgcgcgag gatttcgagc aggcggagcg cggcgtagat gccgtcgtcg
      961 taacccaagt agcgatcggc gaagaagaag tgcccgctca tctcgcccgc gacggcggcg
     1021 tgctcttcct tcatcttggt cttgatcagc gagtggcccg tcttccacat gattgggcgg
     1081 ccgccgtggc gcgcgacgtc gtcgaacagc gcctgcgaac acttcacgtc ggcaatgacg
     1141 gtggcgcccg gcgtgcgcgc gaggataccg cgcgaaaaca aggccagcag ccgatcgccc
     1201 cacacgattt cacccgtggc gtcgacgaca ccgagccggt cgccgtcgcc gtcccacgcg
     1261 acgcccacct gcgcgtgctc cgaacgcacg cgcgcgatga ggtcggtcaa gttttgcggc
     1321 accgtcggat cggggtggtg attggggaag cgaccgtcca tgtcgcagta gagcgcgacg
     1381 gggcggtagc cgagggcgtt cagggcgcgc aggccgagtg gtcccgcggc gccgttgccg
     1441 gcgtcggcga cgaccttgag cgtgcccgcg ttgggtgtca tgccctcgat caggcgcgcg
     1501 acgtaggcgt cgtcgacgct ctcggtctgc acgctgccgc ccgtgacgcg cggcaaggcc
     1561 gggccgagcg cgagctcgcg tagctcctgc agcgcggtgc cgaagaagct gccgcggccg
     1621 cgcatgatct tcatgccgtt gtcttcggcc gggttgtggc tgccggtgag catgacgccg
     1681 ccgtcggcgt tcaggtgatg cacggagaaa tagagcttgg gcgtgggacc gacgcccacg
     1741 tcgagcacct gggctccgcc cgcgatgagt cccgccgaca gcgcgtcgaa caggcgcgag
     1801 ccggaaagcc ggcagtcgcg cccgacggcg atgcgcggcg gccgagcggc gccgtcggcg
     1861 cgcaagagct cggcgaggct gcgtccgacg cgctcgacga acgcgtcgcc aaggtcgcgc
     1921 tcggcgtggc cacggatgtc gtattcgcga aagacgtgag cgctcatggg caaacgaacg
     1981 aaacggtaag ggtcatggtg gcggagatta gtacaccggg acggcgcgtc gcacgggtcg
     2041 gcactactac accggcccgg cggtccggac aacgagagga agttcggctc ggagcagaac
     2101 cgttacggat tctgttcgca gaggtagccc gccaggggct ccgagcaacg ctcgtcgttc
     2161 cactgccaat cgaggctgcc gtcgaaggcc gcgcagtctt cgtcgctttg ggcgccgttg
     2221 ggcgttccgg gcgcgaaatc ggcatatttg ccgggatcgg gcatgccgcc acccatgggc
     2281 cccacgtgaa agaatggcca tgcttggggg ccatcacccc aaacccacgt gccttctttg
     2341 gcgctgtcgt tggccccgag ccagacggag ctcgtaggcg gcgcgacgtt cgcgatccag
     2401 tctttcaaga acgcgtcttc gtccgcggac tcgacgacgg cgagcttcaa gtgaaccgtg
     2461 agtccgagct cgcccgcggc gctgccacag cgcatgcccg ccgtcgcgta gttcacgccc
     2521 atggcggccg acggcgcgag gcacaagagg tacacgtggc cattgcgctg ctgggcgctg
     2581 cagcccggcg ggcacgctcc ggcgtcgcaa tcgttgttca cgccgtcgca ggcttcgggc
     2641 gaggggacgc agccttggtg catggtgtcg ccggtgccgc ccgtggccgc aaacgcacct
     2701 gccgtcccgc cgccggctgc cgccgcgcca ccgcgaccga gcgtgtcgtc gatgtagtag
     2761 tggtccgata gcgggcagcc cgcgagcgtc agcgcgacga gcgccgcaag ggcgagctcg
     2821 cgacgcgctt gggtgcggta catgcgggcg agcgcgctcg tcatcggaac gagcccccga
     2881 gcgccacgag attcggcgtg acgtagagcg cgagcttgcg cgcggggtgc gtcaagacga
     2941 ggtacgcgcc gcccgcagcg gcgagcccgc cgaccacgaa gctcgtatag gaaatggcgc
     3001 ggttgcgccg gtacgcttcg agagtgtcgg agctcgacgg cggacagccg ggcgcgcaca
     3061 cggcgtcgag ctccgacttg tggttgagcg ccatcacgcc cgtgagggcg ccgacgccag
     3121 tgaacgccgc gcccgaaatg acgagcgccc agccggccgt tttgcccggg ttcgagtcgc
     3181 gagcgcgtgg cgcttgcgcg ggtggcgggg gcgggggcgc gagcgggccg agcgtgagct
     3241 cgatgtcttc gtgggcgcgt tcgccgagcg tgaactcacg cgtggcgctg cgtccgagcg
     3301 acgtgcgcac gtcgacgcga tgcgggcccg gatcgctcgg gcgatcgatc gcggcgagcg
     3361 ccggctgaac gttcttttga tcgaccgaaa tctcgagagt ttcgccaacg acggcgccgc
     3421 cgacgtgaac acgcagcgtc gggatgcgct cgagcagtgg ctgcgtttcg cgctcggccg
     3481 cttcggcggc gtcgcgatac gcttggttgt ccggatcgag cgcgagcatg tgctccgtcg
     3541 cggcgtagcg ctcgagcgcc tcgaccaagc gtccgagctc gacgagcgtc cgagcctcca
     3601 tcagcgtgat cgtcggcgcc ggaatgatct cccccgcgcg ctcgaagagc acgagcgcgt
     3661 gctcgaagtc gcgctgctcg tgcgcgacgt gctggccggg ctgaagatcc ccagctacgc
     3721 caagacgacc ggatc
//
LOCUS       DATIML010000125         1728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_603308, whole genome shotgun sequence.
ACCESSION   DATIML010000125 DATIML010000000
VERSION     DATIML010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603308"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1728
                     /gene="feoB"
                     /locus_tag="VLJ38_02175"
     CDS             <1..>1728
                     /gene="feoB"
                     /locus_tag="VLJ38_02175"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HSU38335.1"
                     /translation="PEEKHEPPVVVLVGNPNVGKTSVYNQLTGERAHIGNYPGVTVEQ
                     RSGRLELATHGTVTVIDLPGAYSLSARSAEEQIALDALLGHAGLERPSLCVVVVDAGQ
                     LSRNLYLVLQLLELELPIVVALNMLDEVAHNPPSPTALSRFLGVPVVVTDGRRGTGMN
                     ELKRVMNERLGKPATACVVVSYPPALVTDAERVAEALPAAWRTTVGRDRALALWALAS
                     VEPGDELRDIAPELRERCEDVRRRAEPRDIDRELIAARYACIDAALESLYARLERHPP
                     KRASSERVDRVLLHPIAGFAIFLGLMLVVFQALFSWSDPAIRLIERSIGWLSGELVRL
                     LPAGVLRDLLVEGVIGGVGNVVVFLPQILLLFLMIGLLEDSGYMARVAFLMDRVLKTL
                     GLHGRAFVPMLSGFACAVPAILATRTMERQRDRLLTMLVIPLMTCSARLPVYTLIIAT
                     LFPPSHVFGLVPLQGLMMVGMYAFAVVTTLVVALVLGRTAVRGRRVPLVLELPPYRLP
                     SLRLTLRGMLERALVFLKEAGTVILACTVALWALLAFPRMPAHEPERTPSAEERAATD
                     RATTPKVHPT"
BASE COUNT          224 a          629 c          566 g          309 t
ORIGIN      
        1 cccgaagaga agcacgagcc gcccgtcgtc gtcctcgtcg gcaatccgaa cgtcggcaag
       61 acgagcgtct acaaccaact caccggcgag cgcgctcaca tcggcaacta tccgggcgtc
      121 accgtcgaac agcggagcgg ccgtctcgag ctggccaccc atggcacggt caccgtcatc
      181 gacctgcccg gcgcgtattc gctctccgcc cgctcggcgg aagagcaaat cgcgctcgac
      241 gcgttgctcg gccacgccgg actcgagcgg ccgtcgctct gcgtcgtcgt ggtcgacgcc
      301 ggtcaactga gccgcaatct ctacctcgtg ctgcagctgc tcgagctcga gctgccgatc
      361 gtcgtggcgc tcaacatgct cgacgaggtg gcgcacaatc cgccgagccc cacggcgctg
      421 tcgcgctttc tcggcgtgcc ggtcgtcgtc acggacggtc ggcgcggcac cggcatgaac
      481 gagctcaagc gcgtgatgaa cgaacgcctc ggcaagcccg cgactgcgtg cgtcgtcgtg
      541 agctacccgc ccgccttggt caccgacgcc gagcgtgtgg ccgaagcgct ccctgccgcg
      601 tggcgcacga ccgttggccg cgaccgcgcg ctcgccctct gggcgctcgc gagcgtcgag
      661 cccggcgacg agctacggga catcgccccg gagctccgcg agcgttgcga agacgtccgg
      721 cgccgagccg aaccgcgcga catcgatcgc gagctcatcg ccgcacgcta tgcctgcatc
      781 gacgctgccc tcgagtcgct ctatgcccgg ctcgaacgcc atcccccgaa gcgtgcgtcg
      841 tcggagcgcg tcgatcgcgt gctgctacac cccatcgccg gcttcgcgat ttttctgggt
      901 ctgatgctgg tcgtgttcca ggcgctcttt tcttggtcgg atccggcgat ccgcctgatc
      961 gagcgctcga tcggctggtt gtcgggcgag ctcgtgcggc tgttgcctgc gggtgtcttg
     1021 cgcgacctgc tcgtcgaggg tgtcatcggc ggcgtcggca acgtggtcgt gttcttgccc
     1081 caaatcctgc tgctcttctt gatgatcggg ctgctcgagg attccggcta catggcgcgc
     1141 gtcgcgttct tgatggaccg cgtgctgaag acgctcggct tgcacgggcg cgccttcgtg
     1201 ccgatgctct cggggtttgc gtgcgccgtg cccgcgattt tggcgacgcg caccatggag
     1261 cgacagcgcg accgcctgct cacgatgctc gtgatcccgc tgatgacctg ctcggcgcgc
     1321 ctgccggtct acacgctgat catcgcgacg ctgttcccgc cgtcgcacgt gttcggcttg
     1381 gtgccgctcc aggggctcat gatggtcggc atgtacgcgt tcgcggtcgt gacgacgctg
     1441 gtcgtcgcgc tcgtgctcgg tcgcacggcc gtgcgcggcc ggcgcgtgcc gctcgtgctc
     1501 gagctaccgc cgtatcgcct accgagcctc cggctcacgc tgcgcggcat gctcgagcgc
     1561 gcgctcgtgt tcctgaagga ggccggcacc gtgatcctcg cctgcacggt ggcgctctgg
     1621 gcgctgctcg cgttcccccg catgcccgcg cacgagcccg agcgcacgcc gagcgccgaa
     1681 gaacgcgccg ccacggatcg agcgaccacg cccaaggtcc acccgacc
//
LOCUS       DATIML010000126         3137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1468984, whole genome shotgun sequence.
ACCESSION   DATIML010000126 DATIML010000000
VERSION     DATIML010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3137
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468984"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..975
                     /locus_tag="VLJ38_02180"
     CDS             <1..975
                     /locus_tag="VLJ38_02180"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HSU38336.1"
                     /translation="GAGAWGTALALALAERGPVRLYTWEREHARALAEARENRSFLPG
                     FPLVAAVEPTADLAFALTGAELVVLALPSQALRSVLGAARGVLPDVPLVIASKGIESG
                     TWMLLTEVVADVLGPAAARRALVLSGPSFALEVARHLPTNLVVAAVDHALSVVVQNRM
                     ATERLRIYSSGDPVGVEVGGALKNVIAIAAGACDGLGFGYNTRAALITRGLAEMARLA
                     AAKGGNVLTLAGLAGLGDLVLTCTGELSRNRTVGVELGRGARLEDVLRNLGHDAEGVP
                     TAEAAHRLAEQFGVELPISSEVYRVLFEGKPVLDAVHDVLHRPLKPEW"
     gene            1083..2933
                     /locus_tag="VLJ38_02185"
     CDS             1083..2933
                     /locus_tag="VLJ38_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU38337.1"
                     /translation="MAIVRYFPAEGAPLIVALHKPVTTIGRALGNDIALPDASVAHHH
                     AQIVFNGRDFQLEEVDREAEIQINGKKKRRARLVHGDRVTLSRAQLGFSMFTELDMSP
                     ASAAGAQSQAESDMAGLRRLHAFSERLMTVSSVDQLLETLLDDVIQLTGAARGFVLLV
                     DMNEGKSVAPRVRVSRNVRNDAIEDPSGTISDSIVRQVIETKRPIIVSDALTDTTFGK
                     SESVIALKLSSVMCAPLLSQGETVGALYVANDEVKHLFERKQLDLLTIFAGQASLILQ
                     NAMLLSALRADKEKLQGELQDKRFGEIIGACPSMMEVFRKLAKVAATDISVMITGETG
                     TGKELIARELHRRSSRPNGPFVTVNCGAIPENLMESEMFGHVKGAFTGAIASRAGKFQ
                     QADGGTLFLDEVGELTPQLQVKLLRAIQERVVFRVGDNRPERCDIRIVAATNRTLEDM
                     IKTGEFREDLYYRLNVVNLWLPPLRDRGDDVFIIAKALLSKYADELGSPVRGFSPQAL
                     AAIRKASWPGNIRQLENRIKKALVLCDKTLLAPEDLDLGADAESPIVPLEKAKEDFQR
                     RYVLEVLERNNGNRTQTARDLGVDPRTIFRYLEKEQNPMPSGAGATASDD"
BASE COUNT          531 a         1092 c         1040 g          474 t
ORIGIN      
        1 ggtgccggcg cctggggcac ggcgctcgcg ctcgcgctcg ccgagcgcgg cccagttcgc
       61 ctctacacat gggagcgcga gcacgcgcgc gctctcgccg aggcgcgcga gaatcgaagt
      121 ttcttgcccg gcttcccgct cgttgccgcc gtcgagccca cggccgacct cgcctttgcg
      181 ctgacgggcg ccgagctcgt ggtcctggcg ctcccgagcc aggcgctgcg ctccgtgctc
      241 ggcgccgctc gcggcgtgtt acccgacgtg ccgctcgtca tcgcgagcaa gggcatcgag
      301 tcggggacgt ggatgctgct caccgaggtc gtcgccgacg tgctcggccc ggccgcggcg
      361 cgccgcgcgc tcgtgctctc ggggccgagc ttcgcgctcg aggtcgcgcg gcatctgccc
      421 acgaacctcg tggtcgcggc cgtcgatcac gcgctcagcg tcgtcgtgca aaaccggatg
      481 gcgaccgaac gcctgcgcat ctactcgagc ggcgaccccg tcggcgtcga agtcggcggc
      541 gcgctcaaga acgtgatcgc catcgccgcc ggcgcgtgcg acggcttggg tttcgggtac
      601 aacacgcgcg cggcgctcat cacgcgcgga ctcgccgaaa tggcgcggct cgccgcggcc
      661 aagggcggca acgtgctcac gctggcgggc ctcgccggac tcggcgacct cgtgctcact
      721 tgcacgggcg agctgtcgcg taaccgcacc gtgggcgtcg agctcggccg cggcgcgcgg
      781 ctcgaggacg tgctccgcaa tctggggcac gacgccgagg gtgtgccgac tgcagaagcc
      841 gcacatcggc tcgccgagca attcggcgtg gagttaccga tctcgagcga ggtttatcgc
      901 gtgctcttcg aaggtaagcc ggtgctcgac gccgttcacg acgtgctgca ccgcccgctc
      961 aagcccgagt ggtgagggca gagctcgtgc ttccgagcta tgctgcagct cggccgtaag
     1021 gccggcgctc tgccctcagt gggcgcgcgc cgcgtacgga taggctaggc tcgggacact
     1081 cgatggctat cgttcggtat tttccggcgg aaggagctcc cttgatcgtg gcgctccaca
     1141 agcccgtgac caccatcggc cgtgcactcg gcaacgacat cgccttgccg gacgcgagcg
     1201 tggcgcacca ccacgctcag atcgtcttca acgggcgcga cttccagctc gaggaagtcg
     1261 accgtgaggc cgaaatccaa atcaacggca agaagaagcg ccgcgcgcgg ctcgtccacg
     1321 gcgaccgcgt cacgctgagc cgcgcccagc tcggcttcag catgttcacc gagctcgata
     1381 tgagccccgc ctccgccgcg ggagcacagt cgcaggcgga aagcgacatg gcgggcctgc
     1441 gtcgcctgca cgccttcagc gagcggctca tgacggtgag ctcggtggac cagctgctcg
     1501 aaacgctgct cgacgacgtg atccaactca cgggcgccgc gcgcggcttc gtgctgctcg
     1561 tcgacatgaa cgagggcaag agcgtggcgc cgcgcgtgcg ggtatcgcgc aacgtgcgaa
     1621 acgacgcgat cgaggatccc tcgggcacga tcagcgacag catcgtgcgt caggtgatcg
     1681 agaccaagcg gcccatcatc gtgagcgacg ccttgacgga cacgacgttc ggcaagagcg
     1741 agagcgtcat cgcgctcaag ctctcgagcg tcatgtgcgc gccgctcttg agccagggcg
     1801 agaccgtggg cgcgctttac gtcgccaacg acgaggtcaa gcacctgttc gagcgcaagc
     1861 agctcgatct gctcacgatc ttcgcgggac aagcctcgct catcctgcag aacgccatgc
     1921 tcttgagcgc cctccgcgcc gacaaggaaa agctccaggg cgagctccaa gacaagcgtt
     1981 tcggcgaaat catcggcgcc tgcccgtcga tgatggaggt gttcagaaag ctcgccaagg
     2041 tcgcggccac cgacatcagc gtcatgatca cgggcgagac gggtacgggc aaggagctca
     2101 tcgcgcgcga gctacatcgc cgctcgagcc gcccgaacgg cccgttcgtc accgtcaact
     2161 gcggcgccat ccccgaaaac ttgatggaga gcgagatgtt cgggcacgtg aagggcgctt
     2221 tcacgggcgc catcgcgagc cgcgccggca agttccagca agcggacggc ggcacgctct
     2281 tcctcgacga ggtgggcgag ctcacgccgc agctccaggt caagctcttg cgcgcgatcc
     2341 aggagcgcgt cgtgtttcgc gtcggcgaca accgccccga gcgttgcgac atccgcatcg
     2401 tcgccgccac gaaccgcaca ctcgaggaca tgatcaagac cggcgagttc cgggaagatc
     2461 tctactaccg gctcaatgtc gtaaacctct ggctcccgcc gctgcgcgat cgcggcgacg
     2521 acgtgttcat catcgccaag gcgctgctca gcaaatacgc tgacgagctc ggcagccccg
     2581 tgcgcggctt ctccccgcag gcgctcgccg cgatccgcaa ggcgtcctgg cccggcaaca
     2641 ttcggcagct ggaaaatcgc atcaaaaaag cgctcgtgct ttgcgacaag acgctgctcg
     2701 cgcccgagga tctcgatctc ggcgccgacg cggagagtcc catcgttccg ctcgaaaaag
     2761 ccaaggaaga ctttcagcgc cgctacgtgc tcgaggtgct cgagcgcaac aacggcaacc
     2821 gcacgcaaac ggcgcgcgac ctcggtgtcg atccgcgcac gatcttccgt tacctcgaaa
     2881 aagagcagaa cccgatgccg agcggcgcgg gcgcgaccgc ctcggacgac tgagcgcctg
     2941 cgtgccgcgc gcgcggcgct tactgcacgc cgcccacgag ccaggcgaac gcaggcacga
     3001 gcacctcttc gggacgcgcg ccgccttgct cgagcgcgct cgtgccttcg ccgcgcggct
     3061 cgaggcggaa gccgtggtcg ccgaagacga agagcagcgt gcgcggtggc aatttttcgc
     3121 agagctcggc aatggcg
//
LOCUS       DATIML010000127         5805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2913518, whole genome shotgun sequence.
ACCESSION   DATIML010000127 DATIML010000000
VERSION     DATIML010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5805
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2913518"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1130
                     /locus_tag="VLJ38_02190"
     CDS             <1..1130
                     /locus_tag="VLJ38_02190"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HSU38338.1"
                     /translation="LTIFALMGLAPLFGWRKTSPEALKKAFIAPVAALVVTFVLHVAF
                     GRALGYPAFVERDVFYPGVVGVVLQKIGSVLPGLTVAIAGFNVTVVIQEFARGIAARQ
                     RSAEKRNETESIPVALLRLVDKNRRRYGGYIVHLGICAMFIGFTGGAWGLDRETAMTP
                     GQTYKLGHYDLRYEGSRMCPGNPRCSPEEQSDVTKRMIFADLTLLRNGQAIGQLSPAK
                     FIYHRQPDSPTTEVSMRRSLMEDVYTVLGTVDPQSKRATFQLHLNPLVSWIWMGVLVL
                     ISGAMISLWPELSFREVGAWSYLRASAGASAGVATSVMLAVWLAVSPTSAYAAAPRPR
                     APAVAGAAVASERPLPFGAFGAAGAGLVLGAAVAFGRRRSR"
     gene            1127..1753
                     /locus_tag="VLJ38_02195"
     CDS             1127..1753
                     /locus_tag="VLJ38_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38339.1"
                     /translation="MKAHQVRSRAVAAVLPAVTVVTAVVVGVTFGVELSLLVVAAGAL
                     AGVIALLWASVQSLTGESPLTLEEAMTLGAPSVEEEQKRAVLRALKDLEFERGVGKIS
                     EEDYVELSARYRAEAKRLMQLLDAGSEPERARAEKALRERIVKTAEAEAKAAEQAAVD
                     AADAAEAARAAELDAASDDEATASDDEAHDAVSEPVNLPPGAGEEKAS"
     gene            1750..3063
                     /locus_tag="VLJ38_02200"
     CDS             1750..3063
                     /locus_tag="VLJ38_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38340.1"
                     /translation="MTLRAFRAHLTLLLALLVLLLAPARVNAQDEEDELPPGHPGVTG
                     APGAMGHPELAGHQTAPDNVAPAPELKTGTIDVSVLDADDHPVAGQDVRLGIMFNKVA
                     EGESRSSRFGKTGPDGVARFEGLQNNSAYAYRVTVRTGVAEFAATPFNLKETGGMRVS
                     LHVFPVVQDLSGAPIGIRGFFYVETRDEVFQVEGLFRVSNIGHAAWVPRDVLVGLPDG
                     FKAFTGGESMFDSKFEAVEGRGARLVGTFPPGQRDLSFRFQVPKDAVSTAVFRFTPPP
                     RAYEMRVIAVASTSMGLEVDGWEAPQTGVDPSGNRVLVTRKLAQRGEAAVGPFVVTLT
                     GLPVPGPGRWIAIAIALAFVGAGAAAAAGKWRLVSTERVQSDRARACDLLLDELVALN
                     RAKDRGDVGPQTHERTQRALMDALARIGIPATTKPRKTARKPQRA"
     gene            3478..4614
                     /gene="dnaN"
                     /locus_tag="VLJ38_02205"
     CDS             3478..4614
                     /gene="dnaN"
                     /locus_tag="VLJ38_02205"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HSU38341.1"
                     /translation="MHVIVSKKDLVPVLERCQGVADRKSTMPVLGNVLLEVGGPNELK
                     LSATDLILAVRGRVNARVEQGGSVAVGARDLIERVRNMPDGEIGIATTANAATTLRAV
                     GSARRFTLQGIPGEEFPSLPQPDKDAKAQTLEASVLATLISGTHFSISNDETRPHLSS
                     ALFESEGDWVRMVTTDGHRLSKTEVRVEGRQTAGNMLIPLKGVNELRRLCDEAVGKAD
                     GAAELRIVQSGPNAYFELPGFQFSVKLVDAQFPPYQQVIPQEYAHRVKVPRLATAEAL
                     NAVSVAASDRTGGVKLSLSKGKLRFESESPESGEGFDELAVDYAGPDLTVGFNARYFL
                     DVLRAIGEDEVELGLGGELDPAVIRPAAPNTRQNYVAVIMPMRI"
     gene            4646..5758
                     /gene="recF"
                     /locus_tag="VLJ38_02210"
     CDS             4646..5758
                     /gene="recF"
                     /locus_tag="VLJ38_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240774.1"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HSU38342.1"
                     /translation="MTSSLLFERLSIRGVRNLTALELEPAPRLNVIVGDNGQGKTSVL
                     EALYLVATTKSFRAERLGTLIQAGTEQASVGAVVSEAGMRREQRTVLGPRSRVVRLDG
                     KAPKSLAGYATRTPVVVFSPADLELVSGAASGRRRLLDRVALYLDPPGTDARLRYEHA
                     LRSRQRVLEERGPGARELDAFEEVMAEDGARFALARERAADGVRERLAATFARLAAPE
                     LAVQCVYVPGGTTEPDLFRQKLAAARAADARRGAATFGPQRDELELDIDGRPARSHAS
                     QGQQRLLTLALKLTELDCIREARGAHPVLLLDDVSSELDPERTLAVHELLMNTQSQVF
                     VTTTRADLFPERPVLSTERADFRLTAGALSGAPRHL"
BASE COUNT          926 a         2073 c         1919 g          887 t
ORIGIN      
        1 gtctcaccat cttcgcgctg atgggacttg ccccgctctt cggctggcgc aaaacgagcc
       61 cggaagcgct caagaaggcc ttcatcgccc ccgtcgcggc gctcgtcgtc accttcgtgc
      121 tgcacgtcgc gttcgggcgc gcgctcggtt accccgcgtt cgtcgagcgc gacgtgtttt
      181 atcccggcgt ggtcggcgtc gtcctgcaga agatcggctc cgtcctgccg ggactcaccg
      241 tcgcgatcgc cggcttcaat gtcaccgtcg tgatccagga gttcgcgcgc ggcattgcgg
      301 ctcgccagcg ctccgccgag aagcgcaacg agacggagag catcccggtc gcactcctcc
      361 gcctcgtcga caaaaatcgc cgtcgctacg gcggctacat cgtgcatctc ggcatctgcg
      421 cgatgttcat cggtttcacg ggcggtgctt ggggtctcga ccgcgagacg gcgatgacgc
      481 ccggccaaac ctacaagctc ggccactacg acctccgcta cgaaggctcg cgcatgtgcc
      541 ccggcaaccc gcgctgcagc cccgaagagc agtccgacgt gaccaagcgc atgatcttcg
      601 ccgacctcac gctgctccga aacggccaag ccatcggcca gctttcgccg gcgaaattca
      661 tctatcaccg gcagcccgac agcccgacca cggaagtgag catgcgccgc tcactgatgg
      721 aggacgtgta caccgtgctc ggcaccgtgg acccgcagag caagcgcgcg accttccagc
      781 tccatctcaa tccgctcgtg tcttggattt ggatgggggt gctggtgctc atctcgggcg
      841 ccatgatttc cctctggccc gagctgagct tccgcgaagt cggcgcgtgg agttacctgc
      901 gggcttcggc cggtgcctcg gcgggcgtcg ccacgagcgt catgctggcc gtatggctcg
      961 ccgtgagccc gacgagcgcc tacgccgcgg caccgcggcc acgcgcacct gccgtggccg
     1021 gggcggccgt cgcgagcgaa cgaccgctgc ccttcggagc attcggtgcc gccggcgccg
     1081 ggctcgtcct cggagcggcc gtggccttcg ggcggcggcg tagccgatga aggcgcacca
     1141 ggttcgctcg cgcgccgtgg ccgcggtgct gcccgccgtc acggtcgtca cggccgtcgt
     1201 cgtgggcgtc accttcggcg tcgagctctc gctgctcgtg gtggccgcgg gcgcgctcgc
     1261 gggcgtcatc gcgctcttgt gggccagcgt gcagagcctc acgggcgagt cgccgctcac
     1321 gctggaggag gcgatgacgc tcggcgcgcc atcggtcgaa gaagaacaga agcgcgccgt
     1381 gctgcgcgcg ctcaaggatc tcgagttcga gcgcggcgtc ggcaagatca gcgaagagga
     1441 ctacgtcgag ctctcggcgc gttaccgcgc cgaggcgaag cgcctgatgc agctcctcga
     1501 cgccggcagc gaacccgagc gcgcgcgcgc cgaaaaggcc ctacgcgagc gcatcgtcaa
     1561 gaccgctgaa gccgaggcca aagcggcgga acaagccgcc gtcgacgccg ccgacgcggc
     1621 ggaagcggca cgagccgccg aactcgacgc tgcatccgac gacgaggcga ccgcgtccga
     1681 cgacgaggcc cacgacgccg tctccgagcc tgtgaacctt ccgccgggcg ccggcgagga
     1741 gaaagcctcg tgaccctccg cgcgttccga gcacacctca cgctcctcct cgcgctcctc
     1801 gttctgctgc tcgcgcctgc gcgcgtgaac gcgcaagacg aggaggacga gctgccgcct
     1861 ggacaccccg gcgttaccgg agctccgggc gccatgggac accccgagct cgccggccat
     1921 cagacggcgc cggacaacgt cgctcccgcg cccgagctca agaccggcac catcgacgtg
     1981 agcgtcctcg acgccgacga ccaccccgtc gccggccaag acgtgcggct cggcatcatg
     2041 ttcaacaagg tggccgaggg tgagtcgcgc agctcgcgct tcggtaaaac aggcccggac
     2101 ggcgtcgccc gcttcgaagg cctgcagaac aacagcgcct acgcctaccg cgtcaccgtg
     2161 cgcaccggcg tcgccgagtt cgccgcgacg ccgttcaatt tgaaggagac gggcggcatg
     2221 cgcgtctcgc tgcacgtctt cccggtcgtg caggacctga gcggcgctcc catcggcatc
     2281 cgcggcttct tctacgtcga gacccgtgac gaggtcttcc aagtggaggg cctgttccga
     2341 gtgagcaaca ttgggcatgc ggcatgggtg ccgcgtgacg tgttggtcgg gctgcccgac
     2401 ggcttcaaag cgttcactgg cggcgagtcg atgttcgatt ccaaattcga ggccgtcgag
     2461 ggacgcggcg cacgcctcgt cgggacgttc ccgccggggc agcgcgatct aagtttccgt
     2521 tttcaggtcc cgaaagacgc ggtttcaacc gccgtatttc ggttcacgcc gccgccgcgc
     2581 gcgtacgaga tgcgcgtgat cgccgtcgcg agcaccagca tgggactcga agtcgacggc
     2641 tgggaagcgc cgcagaccgg cgtcgatccg agcggcaatc gcgtgctcgt gacgcgcaag
     2701 ctcgctcagc ggggcgaggc cgccgtcggt cccttcgtcg tgacgttgac gggcttgccc
     2761 gtgcccggac cgggccgttg gatcgcgatc gccatcgcac tcgcgttcgt cggtgccggt
     2821 gcggctgccg cggccggcaa gtggcgcctc gtctccaccg agcgcgtgca gagcgatcgc
     2881 gcgcgcgcct gcgacctgct cctcgacgag ctcgtcgcac tcaatcgcgc caaggaccgc
     2941 ggcgacgtcg gcccccagac gcacgagcgc acccagcgcg cactgatgga cgccctcgcc
     3001 cgcatcggca tccccgcgac cacgaaaccg cgcaaaaccg cacgtaaacc gcagcgcgcc
     3061 tgaacggccg cgcaacgtgc gtatttcccg cagatcgggc ctttcggctg tcggccggtc
     3121 gcccgagctc agtcatccac aggctgagga taacctctgg aaatccctag ggaacgatcg
     3181 ggtgactctc cgtggacgaa tcggtggcaa cgcttatcca cagcccgcat ccctggtcca
     3241 tccgccatcg gccgcgcggc agcttgagcg ctattaatca gtaatatcca acggctatgg
     3301 agttatcccc actgtcccca acgcctacgg agacgtccct taatttaatt aacttaatct
     3361 cctgatcgtc agagaacttg gcccaagctc tccgctcgga tcccggcgct gggctctcga
     3421 ccggtggcac gctaacgcta gcgccgggcc gttcgcccgg ttacacgtcc gcccgagatg
     3481 cacgtcatcg tcagcaagaa ggacctcgtc cccgttctcg agcgctgcca gggcgtcgcc
     3541 gaccgcaaga gcacgatgcc cgtgctcggc aacgtgctgc tcgaggtggg cgggccgaac
     3601 gagctcaagc tctccgcgac ggatctgatc ctcgccgtgc gcggccgagt gaacgcgcgg
     3661 gtcgagcagg gcggtagcgt ggccgtggga gcccgcgatc tcatcgagcg cgtgcgcaac
     3721 atgcccgacg gcgagatcgg catcgccacg acggcgaacg ccgcgacgac gctccgcgcc
     3781 gtcggctccg cgcgtcgctt cacgctgcag ggcatcccgg gcgaggagtt tccgagcttg
     3841 ccgcagccgg acaaagacgc caaggctcag acgctcgagg cgagcgtgct cgcgacgctg
     3901 atcagcggca cgcatttttc gatttcgaac gacgagacgc gcccgcactt gagcagcgcg
     3961 ctgttcgagt cggaaggcga ctgggtgcgc atggtgacga ccgacgggca ccggctctcc
     4021 aagaccgagg tgcgcgtcga gggccgccag accgcgggaa acatgctgat cccgctcaag
     4081 ggcgtgaacg agctccggcg gctgtgcgat gaggccgtgg gcaaggcgga cggcgccgcc
     4141 gagctccgca tcgtgcaatc gggtccgaac gcgtacttcg agctgcccgg cttccaattc
     4201 agcgtgaagc tcgtcgatgc gcagttcccc ccctaccaac aggtcatccc gcaggagtac
     4261 gcgcatcgcg tgaaggtccc gcgcctcgcg acggccgaag cgctcaacgc cgtctccgtg
     4321 gcggcgagtg accgcaccgg cggcgtgaag ctctcgctct cgaagggcaa gctgcgtttc
     4381 gaaagcgaga gccccgagag cggcgaaggc ttcgacgagc tcgcggtcga ctacgcgggg
     4441 cccgatctga ccgtcggctt caacgcgcgc tacttcctcg acgtgctccg cgccatcggc
     4501 gaggacgagg tcgagctcgg tctcggcggc gagctcgatc ccgcggtcat tcgccccgcg
     4561 gcaccgaaca cgcggcaaaa ctacgtcgcg gtgatcatgc cgatgcggat ttgaggcggg
     4621 ttctgacggg acgtgaggac gcgacgtgac cagctcgctc ctcttcgagc ggctcagcat
     4681 tcgcggcgtg cgtaacctca cggcgctcga gctcgagccc gcgccgcgcc tgaacgtcat
     4741 cgtcggcgac aacgggcaag gcaagacgag cgtgctcgaa gcgctctacc tcgtcgcgac
     4801 gacgaagagc tttcgcgccg aacggctcgg cacgctgatt caggcaggca cggagcaagc
     4861 gagcgtgggc gctgtcgtga gcgaagctgg gatgcggcgc gagcagcgca ccgtgctcgg
     4921 gccgcgctcg cgcgtcgtgc gtctcgacgg caaggcgccg aagagcctcg ccggttacgc
     4981 gacgcgcacg ccggtcgtcg tgttcagccc agcggatctc gagctcgtga gcggcgccgc
     5041 ctcgggccgc cggcgtttgc tcgaccgcgt ggcgctttac ctcgatccgc cgggcacgga
     5101 cgcgcgtctc cgctacgaac acgcgctgcg ctcccgccag cgcgtgctcg aggagcgcgg
     5161 ccccggagcg cgcgagctcg acgcgttcga ggaagtaatg gccgaggacg gcgcgcgctt
     5221 cgccctggcg cgcgagcgcg ccgcggatgg cgtacgcgag cgcctcgccg cgacgttcgc
     5281 gcgtctggcc gctccggagc tcgcggtgca atgcgtctac gtgccggggg ggacgaccga
     5341 acccgacctc ttccgccaaa agctcgccgc cgctcgcgcc gccgacgcgc gccgcggcgc
     5401 cgcgacgttc ggccctcagc gcgacgagct cgagctcgac atcgacggtc gtcccgcgcg
     5461 cagccacgct tcccaaggtc agcaacgcct gctcacgctc gcgctcaagc tcaccgagct
     5521 cgactgcatc cgcgaagcac gcggcgccca ccccgtcctc ttgctcgatg acgtctcgag
     5581 tgagctcgat cccgagcgca cgctggccgt acacgagctc ttgatgaaca cccagagcca
     5641 ggtcttcgtc acgacgacgc gcgccgatct gttccccgag cgcccggtcc tgagcacgga
     5701 acgagccgat ttccgcctga cggccggtgc actttccggc gccccgcggc atctgtagga
     5761 atagccgcga aaatcgcgcc gaaacgcggc tataacgtgc cgtaa
//
LOCUS       DATIML010000128         3232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1758167, whole genome shotgun sequence.
ACCESSION   DATIML010000128 DATIML010000000
VERSION     DATIML010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1758167"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VLJ38_02215"
     CDS             <1..267
                     /locus_tag="VLJ38_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38343.1"
                     /translation="SQYDNGKWNQVERSAAEKQGLDNAATARERGQTQAERFNSRDAA
                     ARSGTARGEGRSGTPRPSTSPAGTPSGGGSRGGARPSGGGGRRR"
     gene            complement(264..1916)
                     /locus_tag="VLJ38_02220"
     CDS             complement(264..1916)
                     /locus_tag="VLJ38_02220"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSU38344.1"
                     /translation="MADGLEPELVELRRRVAELERQLERLGGEAEEQVRGARAQGQAL
                     LDNIPHMAWMKNTDGVFLAVNEAFARACGHDKARILGKTDRDIWPLDHAERYMADDRR
                     VIATREKVLVEEPIVEDGTLKWFETFKTPINDSRGAVIGTVGLARDITESKRHEEQRR
                     QLERRMQQTQKLESLGVLAGGIAHDFNNLLVGVLANAELGLTAARQTHASRVVFDRLN
                     DVRKAALHAAELTNQMLAYAGRAHFDVRPLSLSEVIREMGHLLDASISKKARVEYDLA
                     PELPAVQADIAQMRQVVMNLIINASEALGDRVGTIVVRTGVQDVTDELYDLYAPSSLA
                     LGRYVFLEVKDDGSGMSDETRTRLFEPFFTTKFTGRGLGLSAVQGIVRGHGGGIVLRT
                     ALGQGTSIRVLMPPSTAPATNVVRRAPVVASEWSASGLVLLVDDDAHVRTVTELLLRD
                     IGFDVLALATGRDAIREFTERAEQIRIVVLDVTMPDLGGDQVLRELRLRRADVPVLLC
                     SGYSQEEMGDRFAASDLATFLQKPYAFDTLRSRLRELLERTD"
     gene            complement(2292..>3232)
                     /locus_tag="VLJ38_02225"
     CDS             complement(2292..>3232)
                     /locus_tag="VLJ38_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSU38345.1"
                     /translation="DKTGTLTEGKPKLRSVTPETSFDQATLLRLAASVEQSSEHPLAA
                     SIVQGATARGLVLPRTESFESVTGQGVKGRVEGREVAVGNAELMTAVTGAASDLDERA
                     KPFRADGETVLFVAIDRRYAGRLAVADPIKESTPEALRALKGEGVRIVMLTGDSRTTA
                     GAVARKLGIEEVLADVQPDQKLACVKKLQAEGRVVAMAGDGINDAPALAQAEVGIAMG
                     TGTDIAMESAGVTLVKGDLRALSRARKLSHETLANIKQNLFFAFVYNALGVPIAAGVL
                     YPFFGILLSPMLAAAAMSGSSVSVISNALRLRRTKL"
BASE COUNT          484 a         1099 c         1105 g          544 t
ORIGIN      
        1 agccagtacg acaacggcaa atggaatcag gtcgaacgct ctgccgcgga aaagcagggg
       61 ctcgacaacg ccgcgacggc ccgcgagcgc gggcaaaccc aggccgaacg cttcaactct
      121 cgcgacgcgg ccgcccgcag cggcactgcg cgcggcgaag gccgcagcgg cacaccgcgg
      181 ccaagtacgt cgcccgccgg cacgccgagc ggcggcggct cgcgcggcgg cgcccggccg
      241 agcgggggcg gcggccggcg ccgttagtcc gtgcgctcca agagctcgcg caaacgtgag
      301 cgcaaggtgt cgaaggcgta cggcttttgc aggaaagtcg ccagatcgct cgctgcgaag
      361 cggtcgccca tttcctcttg gctgtagccg ctgcaaagga gcacggggac gtcagcccgg
      421 cgcaggcgga gctcgcgcaa gacctggtcc ccgccgagat ccggcatcgt cacgtcgagc
      481 acgacgatgc ggatctgctc ggcgcgctcg gtaaattcgc ggatcgcgtc acggcccgtc
      541 gcgagcgcga gcacgtcgaa gccgatgtcg cgcagcagta gctccgtcac ggtacggacg
      601 tgagcgtcgt cgtcgaccaa gagcacgagc ccgctcgccg accactccga cgcgacgacg
      661 ggcgctcggc gcacgacgtt ggtggcgggg gccgtgctcg gcggcatgag gacgcggatg
      721 ctcgtgccct ggccgagcgc ggtgcgcagc acgatgccgc cgccgtgacc ccggacgatg
      781 ccctgcaccg cggagagtcc gaggccgcgc ccggtgaatt tggtcgtgaa aaatggctcg
      841 aacaggcgcg tgcgcgtctc gtcgctcatg cccgagccgt cgtctttgac ctcgagaaag
      901 acgtagcggc cgagcgccaa cgacgaagga gcgtagagat cgtagagctc gtcggtgacg
      961 tcttggacgc ccgtgcgcac gacgatggtc ccgacgcgat cgccgagcgc ctcggaagcg
     1021 ttgatgatga gattcatcac cacttggcgc atttgcgcga tgtcggcctg cacggcgggc
     1081 agctcggggg cgaggtcgta ctcgacgcga gctttcttcg agatcgaagc gtcgagcagg
     1141 tggcccattt ctcggatcac ctcgctcagg gaaagcgggc gcacgtcgaa gtgcgcgcga
     1201 cctgcgtagg cgagcatttg gttcgtgagc tccgcggcgt ggagcgccgc tttgcgcacg
     1261 tcgttcaggc gatcgaagac gacgcggctc gcgtgggtct ggcgcgccgc cgtgagcccg
     1321 agttccgcgt tcgcgagcac gccgaccagg agattgttga agtcgtgcgc gatgccgccg
     1381 gcgagcacgc cgaggctttc cagtttctgc gtctgctgca tgcgccgctc gagctggcgg
     1441 cgctgctcct cgtgccgctt gctctcggtg atgtcgcgcg cgagcccgac cgtgccgatc
     1501 accgcacctc gcgagtcgtt gatgggcgtc ttgaacgtct cgaaccactt gagcgtcccg
     1561 tcctcgacga tcggctcctc cacgaggacc ttttcacgcg tcgcgatcac ccgccgatcg
     1621 tcggccatgt agcgctcggc gtggtcgagc ggccagatgt cgcgatcggt cttgccgagg
     1681 atgcgcgctt tgtcgtggcc gcaggcacgt gcgaacgcct cgttcacggc caagaacacg
     1741 ccgtcggtgt tcttcatcca cgccatgtgc gggatgttgt cgagcaaggc ttgcccctga
     1801 gcgcgcgctc cgcgcacctg ctcttcggct tcgccaccga gtcgctcgag ctgacgttcg
     1861 agctcggcca cgcgccgccg cagctcgacc aattcgggtt cgagcccgtc agccatcgtg
     1921 cactcggttc gcgtcgtcaa agcaggtcac gttccttcct catgacccgg tcacgccgac
     1981 gcatgctcgt cgccggcccc gaagtccgac ctctgcccta ggtccaggta gtggatctta
     2041 gatcactctg ccccgcccgc gctcgccgaa caagcgccgg cgggagccgc gcgatttacg
     2101 ctcgctcgag cgctgggatt gcgcgccgcc gccccgcgat gacgcgctag gccgagccag
     2161 cacgacgggt caggcaggcg ttctacccgt cgccccacaa ggagcggagt ctcgttgtgg
     2221 ggcgacttgc gtcagtgtat cgagcgcgag ctgctgcgtg tccgactggc gccagcgacc
     2281 cgcggccgcc ctcagagttt agtacgccgg aggcggagcg cgttcgagat gactgaaacc
     2341 gagcttccgc tcatggcggc tgccgcgagc atgggtgata gcaatatgcc gaaaaacggg
     2401 tacagcacgc ctgcagcgat cggcacgccg agcgcgttgt agacgaaagc gaagaacaga
     2461 ttctgcttga tgtttgcgag cgtctcgtgg ctgagcttcc gcgcgcgcga gagagcgcgt
     2521 agatcgcctt tgacgagcgt cacgcccgcg ctttccatcg cgatgtccgt gccggtgccc
     2581 atcgcgatgc cgacctcggc ctgtgcgagc gccggcgcgt cgttgatgcc gtcgcccgcc
     2641 atggcgacga cgcggccttc ggcctggagc ttcttcacgc atgcgagctt ttggtcgggc
     2701 tgtacgtcgg cgagcacctc ctcgatcccg agcttgcgcg cgacggcgcc ggccgtggtg
     2761 cggctgtctc ccgtgagcat gacgatgcgt acgccctcgc ccttgagcgc gcgtagggct
     2821 tcgggtgtgc tctccttgat cggatctgcc acggcgagac gcccggcgta gcggcggtcg
     2881 atcgcgacga acagcaccgt ctcgccgtcg gcgcggaatg gcttcgcacg ctcgtcgagg
     2941 tcgctcgccg cgcccgtcac ggcagtcatg agctccgcgt tgccgaccgc gacctcgcgg
     3001 ccctcgacgc gacccttgac cccctggccc gtgacggatt cgaagctttc ggtcctcggt
     3061 agcacgagcc cgcgcgccgt tgcgccctgc acgatggacg ccgcgagcgg gtgttcactg
     3121 ctctgttcga ccgacgccgc caggcggagc agcgtcgcct ggtcgaagct cgtttccggc
     3181 gtgacgctcc ggagcttcgg tttgccttcg gtgagggtgc cggtcttgtc ga
//
LOCUS       DATIML010000129         3124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5223657, whole genome shotgun sequence.
ACCESSION   DATIML010000129 DATIML010000000
VERSION     DATIML010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3124
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5223657"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /gene="nadA"
                     /locus_tag="VLJ38_02230"
     CDS             <1..200
                     /gene="nadA"
                     /locus_tag="VLJ38_02230"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HSU38346.1"
                     /translation="KRAPGKTLIAAPPEANCACNECPFMRLNTPEKVYLALRDLEPRL
                     EMSEELRVRAKLPIDRMLSLS"
     gene            complement(256..1302)
                     /locus_tag="VLJ38_02235"
     CDS             complement(256..1302)
                     /locus_tag="VLJ38_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38347.1"
                     /translation="MHRLSASVCICFAACTSLAACGSGSDDDAASPTSGSAGAAAGTG
                     GSHSHAAGGTHATSGTGGATAAGGTSGRGASGGTNSGGTSGRNASGGTSGSDASGGAS
                     GSDASGGASGSDASGGTSGTATQGGAQYFGDAHSGNFWLGPVDYTETEWHNACAPSVK
                     YPAGIRTLYGNYIMGLANEVVLQGLKASGGDLCDACVELSANGKTLLARAVTYGEETG
                     PNDIDVSPEIDQALGGDSGRSVSWRFTSCATTAPVQYTFDGRQWTNTWFFRVWVRNAK
                     IPLTKLEYKLGSGAWSAAERQTDGAFQASDQDFSQGFSVRVTGIDGQTLADDLPGLNT
                     FDPDVGVSSHGNFE"
     gene            1627..1983
                     /locus_tag="VLJ38_02240"
     CDS             1627..1983
                     /locus_tag="VLJ38_02240"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSU38348.1"
                     /translation="MQYILLIYGSESEAKKASKDDAMKMHQEYTVFTNELKAAGKMTG
                     GAPLESVTTATTVRVKEGRTLRTDGPFAETREQLGGFYAIEAKDLDEAVAIAAKIPGA
                     KTGSIEVRPVMKLPGM"
     gene            2085..>3124
                     /locus_tag="VLJ38_02245"
     CDS             2085..>3124
                     /locus_tag="VLJ38_02245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HSU38349.1"
                     /translation="MIRILGGDFSLAEEVVQEAFEAALAEWPASGAPRNERAWLYATA
                     RHKAIDKLRRRARFETPLDESAELAALVAAPDDESARSGDDDLLRLIFTCCHPALALE
                     AQVALTLRTLCGLTTDEIARAFLVEPKTMAQRLVRAQNKIHVAKIPYVVPERAELGER
                     LDAVLGVVYLVFNEGYAATAGDALIRHELCREAIRMGRLVERLMPDRAEPVALVALML
                     LHDARRDTRIDSAGELVLLEDQDRSRWDRAEIAEGLERVERALRLGGPTPYAIQAAIA
                     ALHARAPRAEDTDWRQIALLYAELVRVAPTPVVRLNRAVAVAMHEGAERGLELLRELA
                     DEPDLRAHHLFFA"
BASE COUNT          508 a         1082 c         1056 g          478 t
ORIGIN      
        1 agaagcgcgc gccgggcaag acgctcatcg cggcgccgcc ggaggccaat tgcgcctgca
       61 acgagtgccc gttcatgcgc ctgaacacgc cggaaaaggt atacctcgcg ctccgcgatc
      121 tcgagccacg cctcgagatg agcgaggagc tgcgcgtgcg cgccaagctg ccgatcgatc
      181 gcatgctgag cctgtcgtga agggcagcct cgtctgaagg cgcccgcgcc gggcgtcccg
      241 tgaacgcgtc gcgcgtcact cgaagttgcc gtgcgagctc acgccgacgt ccggatcgaa
      301 cgtgtttagc cccggcagat cgtctgcgag cgtctggcca tcaatgcccg tcacgcgcac
      361 ggagaagccc tgcgaaaaat cttggtccga agcctggaac gcgccgtcag tctggcgctc
      421 ggccgcgctc caagcgcctg agccgagttt gtactcgagc ttggtcaacg gaatcttcgc
      481 gttgcgcacc caaacccgga aaaaccacgt gttcgtccac tgccggccgt cgaacgtgta
      541 ctgaaccggc gccgtcgtcg cacaactcgt gaaccgccag ctcacgctac gaccgctgtc
      601 gccgccgagc gcttggtcga tttctggact cacgtcgatg tcgttcggac cggtctcttc
      661 gccgtacgtg acggcgcgcg cgaggagcgt cttgccgttg gcgctgagct cgacgcatgc
      721 gtcgcagagg tcaccgccgc tcgccttcaa accctgcagc acgacctcgt tggccaggcc
      781 catgatgtag ttgccgtaga gcgtgcggat accggcgggg tatttgacgc tcggagcgca
      841 ggcgttgtgc cattcggttt cggtgtagtc gaccggaccg agccagaagt tgccgctgtg
      901 tgcgtcgccg aagtattgag cgccgccctg tgttgcggtg ccgctcgtgc cgccggacgc
      961 gtcgctgccg ctcgcgccgc cggatgcgtc gctgccgctc gcgcccccgg acgcgtcgct
     1021 gccgctcgtg cccccggacg cgttcctgcc gctcgtgccc ccggagttcg tgccgccgga
     1081 cgcgcccctg ccgctcgtgc cgcccgctgc ggtcgcgccg ccggtgccgc tcgtcgcgtg
     1141 ggtgccgccc gccgcgtgcg agtgtgaccc gcccgtgcct gcggcagcgc cggcggagcc
     1201 gctcgtcggg ctcgcggcgt cgtcatctga gccggagccg cacgcggcga gactcgtgca
     1261 agcggcgaag cagatgcaaa cggaagctga aagtcggtgc atgcaggatc tccccaaaac
     1321 gcttgagtgt cgcagagaag ccgcgcgctc gaaagtgcgc ggcttgctca cacgcgcgta
     1381 catctcgaaa agtcacgaag ccgagcggcg ttcgaagctc tacggggcgc gccgcagggc
     1441 gcttaagcga acgcggcgta cggcctgccg cgagccgccg ccgcgaagcg gcgcttcgcc
     1501 aagtgccgga tacttctcga acaatgggtc gccgcccaaa aaagctccca gcctgtcgat
     1561 tcgcggcgcg cccgttcgac tactgactga accgtgccgc tggggcccgg tgcaggagca
     1621 aacgtcatgc aatacattct gttgatttac gggagcgaga gcgaagcgaa gaaggcgtcc
     1681 aaggacgacg cgatgaagat gcaccaggag tacacggtct tcacgaacga gctcaaagca
     1741 gccggcaaga tgaccggcgg cgcgccgctc gagtcggtga cgaccgcgac gacggtgcgc
     1801 gtgaaggaag gccgcacgct gcgcacggac ggcccgttcg ccgaaacgcg cgagcaactc
     1861 ggcggcttct acgccatcga agccaaggac ctcgacgaag ccgtggcgat cgccgccaag
     1921 atcccgggcg cgaagacggg ctcgatcgag gtgcgcccgg tcatgaaact ccccgggatg
     1981 tgaaggatgc gcgacccgag cgctcggtgc gctaggctcg ccgggtggat gcagcgtcca
     2041 tcggcgacct ttatcgtaga gactccggtg cgatcgtcgc gcggatgatt cgcatactcg
     2101 gcggcgattt ttcgctggcc gaggaggtcg tgcaggaagc gttcgaggcg gcgctcgctg
     2161 agtggcccgc ctcgggcgcg cctcgcaacg aacgggcgtg gctctacgcg acggcgcgtc
     2221 acaaggcgat cgacaagctc aggcgccgcg cgcgtttcga gacgccgctc gacgaaagcg
     2281 cggagctcgc agcgctcgtg gccgcgccgg acgacgagtc ggcgaggagc ggcgacgacg
     2341 acctcttgcg gctgatcttc acgtgctgcc accccgcgct cgcgctcgaa gcccaggtgg
     2401 cgctcacgct gcgcacgctg tgcggactca cgacggacga gatcgcgcgc gcgtttttgg
     2461 tcgagccgaa gacgatggcg cagcggctcg tgcgcgcgca aaacaagatc cacgtcgcga
     2521 agatcccgta cgtcgtaccc gagcgcgcag agctcggcga acggctcgac gcggtgctcg
     2581 gcgtcgttta cctcgtcttc aacgagggtt acgccgcgac ggccggcgac gccctgattc
     2641 ggcacgagct ctgtcgcgaa gcgatccgca tggggcggct cgtcgagcgg ctcatgccgg
     2701 accgcgccga accggtggcg ctcgtcgcgc tcatgctgct ccacgacgcg cgccgcgaca
     2761 cacgcatcga cagcgcgggc gagctcgtgc tgctcgagga tcaagaccgc tcgcgctggg
     2821 accgcgccga aatcgccgaa ggtctcgagc gcgtcgagcg cgccttgcgc ctcggtggtc
     2881 ccacgcccta cgcgatccaa gcggccatcg ccgccctcca cgcccgagcg ccacgggccg
     2941 aggacaccga ctggcgacaa atcgcgctgc tctacgccga gctcgtgcgg gtcgccccga
     3001 cgcccgtcgt gcgcctgaac cgcgccgtcg ccgtcgcgat gcacgagggc gccgagcgcg
     3061 gcctcgagct cttgcgcgag ctcgcagacg aacccgatct tcgagcgcac cacttgtttt
     3121 tcgc
//
LOCUS       DATIML010000130         3050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_604084, whole genome shotgun sequence.
ACCESSION   DATIML010000130 DATIML010000000
VERSION     DATIML010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3050
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604084"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VLJ38_02250"
     CDS             complement(<1..746)
                     /locus_tag="VLJ38_02250"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU38350.1"
                     /translation="MELKHTSTRVVTSKDGTRIAYEVLGQGPPLVFVAGALGSRSISF
                     ARKMRAELAKSFTVYDYDRRGRGESGDTQPYSVAREIEDLAAMVELAGGAPLVCGTSS
                     GAALALEAAAAGIPMQLLVAHEPPYAVGDAAASFDRDYTKNVTRLVAEGRREEAVKYF
                     MRTVGVPGFFVWMMRFMSFWKDAVAAAHTLPYDAAVINDFDLPEARLSTIRVPTVVLV
                     GGSTPPRLRTAADAVARVVPGAIEHVVPKQ"
     gene            complement(869..1243)
                     /locus_tag="VLJ38_02255"
     CDS             complement(869..1243)
                     /locus_tag="VLJ38_02255"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSU38351.1"
                     /translation="MKFLVLIYPNQERLDALPEHEFASTMRACLAHADELKRRGKLLD
                     TQMLEPAPTAKTLRKQSGKLVVSDGPFTETKEVLGGFNLIEADTMDDALEIAAGFPWS
                     EFGSVEVRPVLPLENMRSRVQA"
     gene            1332..1817
                     /locus_tag="VLJ38_02260"
     CDS             1332..1817
                     /locus_tag="VLJ38_02260"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HSU38352.1"
                     /translation="MESRAKLLGHPVHQMLIPLPIGAFGLAVVSDAVASHGKSREAAV
                     TAKRALEFGVVTALVAAPFGVIDWLGITPRTRATRVGFWHGLGNLGVLGLFAASRLLR
                     NGRHVPPSARWLAVAGLGLAGVTAWLGGELVDRHGIGVSDLVGENAPSSLLRDAQVYA
                     T"
     gene            2315..2911
                     /locus_tag="VLJ38_02265"
     CDS             2315..2911
                     /locus_tag="VLJ38_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38353.1"
                     /translation="MTGGSAPDGGRGGTSGAGSPSTGGMGGLGSVALCPGPNYLSMKG
                     ALPEFGTDLTFSAGCTSSRVAPYPTAASFTIGRGRMVHVEIDACSDDGTQELTLYVFF
                     MGDSGGQTTLTNATFSFANVSADGTLTVPPLTGTVEVTETSKPVMNWTDTIGYPSAGV
                     GAKYEGSFTVDGSSGSTPVHLTGSFSVCHVANLPDESV"
BASE COUNT          504 a          998 c         1041 g          507 t
ORIGIN      
        1 ttttgcttgg ggacgacgtg ctcgatcgcg ccgggcacca cgcgggcgac tgcatcggcc
       61 gccgtgcgca ggcgtggcgg cgtgcttcct cccaccagga ccacggtagg cacgcggatc
      121 gtggaaagcc gcgcctcggg caaatcgaag tcgttgatca ccgccgcgtc gtacggaagc
      181 gtgtgcgcgg cggcgacggc atccttccaa aacgacatga agcgcatcat ccacacgaaa
      241 aatcccggca ccccgaccgt acgcatgaag tactttacgg cctcctcgcg ccggccttcc
      301 gcgacgagtc gggtcacgtt cttcgtgtag tcgcgatcga acgaggccgc cgcatcgccc
      361 acggcgtagg gcggctcgtg cgccacgagc agctgcatcg ggatgccggc cgccgcagcc
      421 tcgagcgcca gcgcggcgcc ggacgaggtg ccacagacga gcggcgcgcc accagcgagc
      481 tcgaccatgg ccgcgagatc ctcgatttca cgagcgaccg aatacggctg cgtgtcgccg
      541 ctctcaccgc gcccgcgccg atcgtaatcg tacacggtga agctcttggc gagctcggcg
      601 cgcatcttgc gggcgaacga gatgctgcgc gagccgagcg cgcccgcgac gaagacgagg
      661 ggcggcccct gcccgagcac ctcataagcg atgcgagtgc cgtccttcga ggtgaccact
      721 cgggtgctcg tgtgtttcaa ttccatgaca tcgctccggt ttgccgcggc cggtccgtcc
      781 ggcctaccca gacgacgaac acgcgcggcc gagatcgaca agctcggaga cgagctcgtt
      841 tttttccggc gccctgcccg tcccgacgtt acgcctgcac gcgcgagcgc atgttctcga
      901 gcggcaggac gggtcggacc tccacgctgc cgaactcgga ccaggggaac ccggcggcga
      961 tctcgagcgc gtcgtccatg gtgtcggctt cgatgaggtt gaaaccgccg agcacctcct
     1021 tggtctccgt gaacggaccg tccgacacga ccagcttgcc gctctgcttg cgcaacgtct
     1081 ttgcggtcgg tgccggctcg agcatttgcg tgtcgagcag cttgccacgg cgcttgagct
     1141 cgtcagcgtg agcgagacac gcgcgcatgg tggacgcaaa ctcgtgctcg ggcagcgcgt
     1201 cgagccgctc ttgattcgga tagatgagga ccaggaactt cacgacggcg cctccggagg
     1261 ttcgacgagc gtagcgaaat tctgcgagcc gaaccaccca gcccggcacg ctcgttgctc
     1321 aagctcgccg catggaaagc cgagcgaagc ttttgggtca tccggtccat caaatgctga
     1381 tcccgctgcc gattggggcg ttcgggttgg ccgtcgtgag cgatgccgtc gcgagtcacg
     1441 ggaaaagccg cgaggctgcc gtcaccgcga agcgcgcgct cgagttcggg gtcgtgacgg
     1501 cgctcgtggc ggcgccgttc ggagtgatcg attggttggg gatcacgcca cgcacgcgtg
     1561 ccacgcgcgt gggcttttgg cacggtctcg gtaatctcgg cgtgctcggg ttgttcgcgg
     1621 cgtcgcggct actgcgcaac ggaaggcacg tgccaccgtc ggcgcgctgg ctcgcggtgg
     1681 ccggcctcgg cctcgccggc gtcactgcgt ggttgggcgg cgagctcgtc gaccgtcacg
     1741 gcatcggggt cagtgacttg gtaggtgaaa acgcgccgag ctcgctcttg cgcgacgcgc
     1801 aggtctacgc aacgtgacgg cgccgaacgc gccggtgatg agggaccggt gagcgacttc
     1861 gcaacatagc tcggtcgccg ctgacccttc gcacggtttt cgggagaagc gtgacccacg
     1921 gattacgcaa tccgcgcgcg atcgaacgtc cgtggcgctc ctctgcacgt ctcgtcatac
     1981 ttctaccgac gacaccgtgc cgtgggcttt cgtgatgatg aggttcgaac gctcagaagg
     2041 cgcggctccg tgcccgcccg cgctcgactc cggggcgcgc cccctgaggc tggcctctca
     2101 aaccggagct cgtcgtggag cttgcgcgga cgcccagagt ggccaagtga ttctcaggcg
     2161 tctacaagtc gggctagtgg tggtcgccgt gggggcctgc gggagaagcg tccaccaaga
     2221 gccatcgccc aacgagggcg acacgggatc gtcaggaacg ggcggcactg gtggcgacgc
     2281 ggcaatgggc ggaagctcgg gagcagcggc cggaatgacc ggcgggagcg cgccggacgg
     2341 cggaagggga ggcacgagcg gcgccggttc gccctcgacg ggcggtatgg gcggcctcgg
     2401 cagcgtggcg ctctgcccgg ggcccaatta cttgagcatg aagggtgcgc tgccggagtt
     2461 cgggaccgac ctcacattca gcgctggctg cacgagttcc cgagttgcgc cgtacccgac
     2521 ggctgcgagc ttcacgatcg gccgcggaag aatggttcac gtcgagatcg acgcctgcag
     2581 cgacgacggg acgcaggagc tcaccctcta cgttttcttc atgggagatt cgggcggtca
     2641 aaccacgctt accaacgcca cgttcagctt cgcgaacgtg agcgcggacg ggacgctgac
     2701 cgtgccgcca ctcaccggga ccgtggaagt aactgaaacc agcaagcccg tcatgaattg
     2761 gactgacacc atcggctacc cgagcgccgg cgtgggcgcg aagtacgaag gctccttcac
     2821 ggtcgacggc tcgagcggct cgacacccgt gcacctcacg ggctcgttct ccgtctgcca
     2881 cgtcgcgaat ctgcctgacg agtcggtgtg agggctctcg gttccgccta gtgaagttcg
     2941 cattgccgcc atcgaatcag cgcgagcccg ccgggagcta ggaccggtgt ttatgcgcgc
     3001 atcagcatgg cggccacgaa cgatcttgac gctcgcgttc ggtacaatgc
//
LOCUS       DATIML010000131         2321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4647146, whole genome shotgun sequence.
ACCESSION   DATIML010000131 DATIML010000000
VERSION     DATIML010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4647146"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..664
                     /locus_tag="VLJ38_02270"
     CDS             53..664
                     /locus_tag="VLJ38_02270"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HSU38354.1"
                     /translation="MTRQSLKLLPLCLVVLSGCGKEKQVPLTQQTPGDRSGAIGSADP
                     LNGNGQRLEPGTKFARASAKFDAANGSKVGGDAGLEEVTSGVRIRVSVHDAKPNTKLG
                     VHVLEKGDCANLSNDDPGAHLNPRHTRHGLPGGEQHLGDLGNVKVDDKGNGELLILTS
                     GGNLRAGDAHSFLNRAIVVDESEDQGKPEASGGKPALCGVIKE"
     gene            643..1257
                     /locus_tag="VLJ38_02275"
     CDS             643..1257
                     /locus_tag="VLJ38_02275"
                     /inference="COORDINATES: protein motif:HMM:NF024922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HSU38355.1"
                     /translation="MRGHQGVRQLGLFGGGAPAFDSAFKKLERTYLSADAWFDYAPGW
                     LTGHEALFVNLLETVHFRREKRQMYERIVDVPRLIATLPDDGPVPAIVEDARSVLSTR
                     YGETFARISLGYYRNGEESVAWHGDYVARKLPSALVATLSVGAPRRFLLRPKGGGASM
                     ALMLGWGDLLVMGGSSQRTFEHSIPKVRNAGPRIAIMFRPVWEE"
     gene            complement(1262..1402)
                     /locus_tag="VLJ38_02280"
     CDS             complement(1262..1402)
                     /locus_tag="VLJ38_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38356.1"
                     /translation="MRRPDSGDLVWNIMLGILDAALVLGMIGATLRDVPVVRRLVRPS
                     RA"
     gene            1576..1827
                     /locus_tag="VLJ38_02285"
     CDS             1576..1827
                     /locus_tag="VLJ38_02285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38357.1"
                     /translation="MKPLTLSALTLILTAPLACSHDRQDNRAPATGADAQAFDKRGDV
                     QQDVPGAAPLGAGGTTTTDANGTDVPNASATGGTGGTSK"
     gene            complement(1878..>2321)
                     /locus_tag="VLJ38_02290"
     CDS             complement(1878..>2321)
                     /locus_tag="VLJ38_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38358.1"
                     /translation="SGLCDVVMFPVGPFVDARYVDDALPLARQFGVGTVGFKAFGAGK
                     LLGDTSGYGRALEGRPRGKVSSGGTDRDEAPLLAHLSVSDCLDYTLSCDPDVSLLGLS
                     FPNEQDAAFAAAEGFRRRSAGELAEIRERAVVAMRDKGPAWWNPA"
BASE COUNT          421 a          767 c          775 g          358 t
ORIGIN      
        1 cacgatgcgc ggagtacgtc ctggtacggt gcgtgcatcg gttggctcgc aaatgacgcg
       61 ccaaagcctc aaactgttgc ctttgtgtct cgtggttttg agcgggtgcg gcaaagagaa
      121 gcaggtcccg ctcacccagc aaacgccggg tgatcgctcg ggtgccatcg gatcggccga
      181 tcctctgaac ggcaatggcc agcggctcga gccggggacg aagttcgcgc gcgcgagtgc
      241 caagttcgac gctgccaatg ggtcgaaggt cggcggcgac gccggcctcg aggaagtcac
      301 gagcggcgtg cgcattcgcg tctccgtcca tgacgccaag ccgaacacca agctcggggt
      361 ccatgtcctc gaaaagggcg actgcgccaa cctgagcaac gatgaccccg gcgcgcacct
      421 gaacccgcgc cacacacgcc acggtttacc cggtggcgaa caacatttgg gcgatctcgg
      481 caacgtcaag gtcgacgaca agggtaacgg cgagcttttg atcctcacga gcggaggcaa
      541 tctccgcgcg ggcgacgcac acagctttct caatcgcgcc atcgtggttg acgaaagcga
      601 ggatcagggt aagcccgaag cgagcggtgg aaagcctgcc ctatgcgggg tcatcaagga
      661 gtaagacaac tcggactgtt cggcggcggc gcgccggcgt tcgacagcgc gttcaagaag
      721 ctcgaacgca cgtacctctc cgccgacgct tggttcgact acgcgccggg atggctcacc
      781 gggcacgaag cgctgttcgt caacctgctc gagacggtgc attttcgccg agaaaagcgg
      841 cagatgtacg agcgcatcgt cgacgtgccg cgcctcatcg cgacgttgcc ggacgacggt
      901 cccgtgccgg cgatcgtcga agacgcacgc tccgtgctgt cgacgcgtta tggtgagacc
      961 ttcgcgcgca ttagcctcgg ctattaccgg aacggcgagg agagcgtcgc ctggcacggc
     1021 gactacgtgg cgcgcaagct gccgagcgcg ctcgtcgcga cgttgtccgt gggagcgccg
     1081 cgccgctttc ttttgcgtcc gaaaggcggc ggcgcgtcca tggcgctcat gctcggctgg
     1141 ggcgatctgc tcgtgatggg cggcagctct cagcgcactt tcgagcactc gattccgaaa
     1201 gtacggaatg ccggaccgcg catcgcgatc atgtttcgcc ccgtgtggga ggagtgagct
     1261 gctacgcgcg gcttggacgc acgagacggc gcacgacggg tacgtcacgc agcgtagcgc
     1321 cgatcatgcc gagcacgagc gccgcgtcca agatgccgag catgatgttc caaaccagat
     1381 caccgctgtc cggtcgcctc atgacacgct cctctcgtcg gacgataaca gaaggaagcc
     1441 ggtacgggtg acgagcttgc acgccgacgt gtttacgtct ggagcggaac ggccggcgtc
     1501 ggcgcgcatg ttgcacgact tcgctcgaag cgctggcgac gcttgctcgg ccagcgagct
     1561 cacgaggagc gatgcatgaa acctctcact ctttcggcac tgaccctgat tttgacggcc
     1621 ccgctagcct gctcccacga tcgtcaagac aaccgcgcgc ccgcgacggg cgccgatgcg
     1681 caggctttcg ataagcgtgg cgatgtgcaa caggacgtcc ccggcgccgc gccgctcgga
     1741 gccggcggca cgacgacgac cgacgccaac ggcacggacg tcccgaacgc gagcgcgacg
     1801 ggcggcacgg gcggcaccag caagtagccg cgcgtaaacg caagcggcga gttacccgac
     1861 gtgccggcgc gcgtcgctca cgccgggttc caccaagcag gtcccttgtc gcgcatcgcg
     1921 acgacggcgc gctcgcggat ctcggctagc tcgcccgccg aacgccgccg aaagccctcg
     1981 gctgctgcga acgcggcgtc ctgttcgttc gggaagctca gaccgagcag gctcacgtcg
     2041 ggatcgcagc tgagcgtgta gtcgaggcag tcggagacgc tcaggtgcgc aagcagcggc
     2101 gcctcgtcgc ggtcggtgcc acccgagctc accttgccgc gcgggcgccc ttcgagcgcg
     2161 cggccgtacc cgctggtgtc gccgagcaac ttgccggcgc cgaacgcctt gaagcccacc
     2221 gtgccgacgc cgaactgtcg cgcgagcggc agtgcatcat cgacgtagcg cgcgtcgacg
     2281 aagggcccga cggggaacat cacgacatcg cagagccccg a
//
LOCUS       DATIML010000132         2234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1181702, whole genome shotgun sequence.
ACCESSION   DATIML010000132 DATIML010000000
VERSION     DATIML010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1181702"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1236)
                     /locus_tag="VLJ38_02295"
     CDS             complement(<1..1236)
                     /locus_tag="VLJ38_02295"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38359.1"
                     /translation="MILRAPGVMVANRYRLCRQLGVGGMGTVWLADDLLLDSRCALKL
                     IDDDKAQSEEVRMRFAREAKVAAQLRGAHVVDVFEHGEWEGTPFIAMEYLEGEDLGTR
                     LEHRGVLDAASTYRVAAHVSRALARAHAYGIVHRDLKPENIFLVPGDDGEIAKVLDFG
                     IAKHDVYSLRDKATKTGSFLGTPYYVSPEQARGKATDHRSDLWSLAVIVFQCLTGRPP
                     FESEALGELMGLILYEDLPKPSEVRPDLPPSFDAWWEKAAKREREERFQSAKEFADSL
                     AEALSQPPTLAVPSLSPRASLLLEGAGDPLAEDPRETGAPLARTRHSSVPRMSLATAL
                     IRHPRHWRSAVRTLPRKYLAGGAVALGILGGGLLTLLVGQSTPPAAPLPVHVQQQATT
                     VVPPSTTPAPQVEVVGPAAT"
     gene            1663..>2234
                     /locus_tag="VLJ38_02300"
     CDS             1663..>2234
                     /locus_tag="VLJ38_02300"
                     /inference="COORDINATES: protein motif:HMM:NF012964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HSU38360.1"
                     /translation="MANLDELPSFLTRIRGGRPVPDALLAETRRRYELIGSSPLLRVT
                     EEQAALLERRAGAPVFVGMRLAEPSIDDALARAAERGIERIVVVPLAPFSVHVYAAAA
                     EAARERLAASGVAAPALVVVEPWGLESAFVRAHAAAIRPHLEPASTLVLTAHSLPLVA
                     LREGDPYERQVRETADAIGRELGVPFELAF"
BASE COUNT          353 a          762 c          750 g          369 t
ORIGIN      
        1 cgtcgcggcg ggcccaacca cttccacttg cggcgccggg gtcgtcgaag gcggcaccac
       61 cgtcgtcgcc tgttgttgca cgtgcacggg cagcggagcc gcgggcggcg tcgattgccc
      121 gacgaggagc gtgagcagcc cgccgcccag gatcccgagc gcgacggcgc cgccagcgag
      181 gtacttgcgg ggcaaagtgc gcaccgccga acgccagtgc cgcggatgac ggatcagggc
      241 cgtcgcgagg ctcatgcgcg ggaccgagga atggcgagtc cgagcgagcg gcgcgccagt
      301 ctcgcgcgga tcttcggcga gtggatcgcc cgcaccttcg agcagcaagc tcgcgcgcgg
      361 tgacaggctc ggcacggcga gcgtcggcgg ctggctgagc gcctcggcga gcgagtcggc
      421 aaactccttg gccgactgga agcgttcctc gcgctcgcgc ttggcggcct tttcccacca
      481 cgcgtcgaac gacgggggca gatcggggcg cacttcgctc ggtttcggca aatcctcgta
      541 caggatgagc cccatgagct cgccgagcgc ctcgctctcg aagggcggac ggcccgtgag
      601 gcactgaaac acgatgaccg ccagcgacca caggtcggag cgatgatcgg tcgccttacc
      661 gcgcgcttgc tcggggctca cgtagtaggg cgtgccgagg aacgagccgg tcttcgtggc
      721 tttgtcgcgg agtgagtaga cgtcgtgctt ggcgatgccg aagtccaaga ctttcgcgat
      781 ttccccgtcg tcgcccggaa cgaggaagat gttctcgggt ttgagatcgc gatgcacgat
      841 gccgtaggcg tgggcgcgag cgagcgcgcg cgagacgtgc gccgcgacgc gatacgtcga
      901 cgcggcgtcg agcacgccgc gatgctcgag ccgcgtcccg aggtcctcgc cctcgaggta
      961 ctccatggcg atgaacggcg taccttccca ctcgccgtgc tcgaacacgt ccaccacgtg
     1021 agcgccgcga agctgcgcgg cgaccttggc ctcccgcgcg aagcgcatgc gcacttcctc
     1081 gctctgtgct ttgtcgtcgt cgatgagctt cagcgcgcag cgcgaatcga gcaacagatc
     1141 gtcggcaagc cagaccgtgc ccatgccacc gacaccgagc tgacggcaca gacggtagcg
     1201 attggccacc atgacgcctg gcgcgcgcag gatcatccgt cgctccgaac cgcgaccatg
     1261 agagccagca cgcggtacga accgcgtaag ccagtcgtct gatgaacagg tgagctcatg
     1321 taggacgccc agcgtctcag acctacctca tctcgctccg catttccacg gttataaggc
     1381 aaagctagtg ccagagagta caacgttgtc acgtggcgtc gctgaacgtc atccttctct
     1441 agttatgggg tgggtgggca gtcacttcac cttcgatcag cggcggccag gccgattttt
     1501 tttgcggcca gcagggatga cgctgagagt ggaatcgcgt cgcggccgag ccctcatttt
     1561 tcacgcatga ttgacctcgc gcgtccgagc ggctgagagt tccagcaaga ccatatggga
     1621 atgcccccgc gcaccgccgt tcttctcacc gctcacggca cggtggccaa tctcgacgag
     1681 ctcccgagct ttctgacgcg catccgcggc gggcgaccgg tgccggatgc gctcctcgcc
     1741 gagactcgcc gccgctatga gctcatcggt agctcgccgc tcctccgcgt cacggaggag
     1801 caagccgcac tcctcgaacg gcgagcgggc gcgcccgttt tcgtcggcat gcgcctcgcg
     1861 gagccgagca tcgacgacgc gctcgcgcgg gcggccgagc gtggcatcga gcgcatcgtc
     1921 gtcgtgccgc tcgcgccctt cagcgttcac gtttacgcgg cggctgccga agcggctcgc
     1981 gagcgtctgg cggcgagcgg cgtggcagct ccggcgctcg tcgtcgtcga gccctggggg
     2041 ctcgagtcgg cgttcgttcg cgcgcacgca gccgccattc ggccacacct cgaacccgct
     2101 tcgacgctcg tgctcacggc gcacagcttg ccgctcgtcg cgctccgcga aggcgatcct
     2161 tacgagcgcc aggtgcgcga aaccgccgac gccatcggtc gcgagctcgg cgttccgttc
     2221 gagcttgcgt ttca
//
LOCUS       DATIML010000133         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2335660, whole genome shotgun sequence.
ACCESSION   DATIML010000133 DATIML010000000
VERSION     DATIML010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2335660"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..1933)
                     /gene="arsA"
                     /locus_tag="VLJ38_02305"
     CDS             complement(158..1933)
                     /gene="arsA"
                     /locus_tag="VLJ38_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015446 - ATPase-coupled arsenite
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0071722 - detoxification of
                     arsenic-containing substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenical pump-driving ATPase"
                     /protein_id="HSU38361.1"
                     /translation="MQLVDAPPRYLFFTGKGGVGKTSVASATALSLARQGKNVLIVST
                     DPASNLDEVLGTPLGTSPTPIAGASGLSALNLDPEAAAGDYRERVVGPYRGVLPDASV
                     RSIEEQLSGACTVEIAAFDEFAKLLGDAAHTARFEHVVFDTAPTGHTLRLLGLPAAWS
                     TYIEASPGGVSCLGPLAGLGAQRGLYAATRAALRDATQTAIVLVARPEHAALAEAERT
                     RCELCALGIERIHFVLNGVFSATDSADPVARALEARGREALRTLPEGLAHCPRTELPL
                     LSFAPVGREQLEGLLAGRAATPGQAPSAVPRASFPSLDDLVDELACADTGVVFTMGKG
                     GVGKTTLARAIARRLAATGKRVHLTTTDPASERELFGGATPDGVRVSRLDAEVETQAY
                     VAEVLRDTAATLDRAARELVEEELRSPCTQEVAVFRAFARLVGDGTNEFVVIDTAPTG
                     HTLLLLDAAEAFHREVARSAADVPVAVRDLLPRLRDPGFAKVVLVTLPEATPIHEARA
                     LQADLVRAGIRPFAWVVNQSLLPLDVTDPVLVARRAAEPRFVAEVQAAAARFVVEPFA
                     CGEPLAAPRRESDREPQRRLEAVAR"
BASE COUNT          332 a          735 c          742 g          303 t
ORIGIN      
        1 acgagtccgg cgccggtcgc aatcgtgttg gcgagcagcg cgagcgcgat gttcccccca
       61 gcgagccgct cggccatgat cccggagccg acgacggtcg agaggagcag cgccgtccca
      121 atggcctcgg ctacgactcg ctgtgcgagc ggcgacttca tcgcgccacg gcctccaggc
      181 gtcgctgcgg ctcgcgatcc gactcacggc gtggcgcggc gagcggctca ccgcaagcga
      241 agggctccac gacgaagcgc gctgccgccg cctgaacctc cgccacgaag cgcggctcgg
      301 cggcgcgccg ggcgacaagc accggatcgg tcacgtcgag cggcaagagc gactggttga
      361 cgacccaggc gaacggtcga atgccggcgc gaaccagatc ggcctgtagc gcgcgtgctt
      421 catggatggg cgtcgcttcg ggtagcgtga cgagcacgac cttcgcaaaa cccggatcac
      481 ggagccgcgg cagcaggtcg cggaccgcca cgggcacgtc agcggccgag cgagctacct
      541 cgcggtgaaa ggcctcggct gcgtcgagca gcagcagcgt gtgtcccgtg ggcgcggtgt
      601 cgatgaccac gaattcgttc gtcccgtccc caaccaaccg cgcaaaggca cgaaagacgg
      661 cgacctcctg cgtgcacggc gaacggagct cttcctcgac aagctcgcgt gccgcccggt
      721 cgagagtcgc ggcggtgtca cgcaatactt ccgccacgta agcttgcgtt tccacttcgg
      781 catcgagccg gctcaccctc acgccgtcgg gcgtggcgcc cccgaagagc tcgcgctcgg
      841 acgcggggtc cgtcgtggtc agatggacgc gcttacctgt tgccgcgagg cgtcgagcga
      901 tggcacgcgc cagcgtcgtt tttccgacgc cgcccttgcc catcgtgaaa acgactcctg
      961 tatccgcgca ggcgagctcg tccacgagat cgtccaggct gggaaacgac gcgcggggca
     1021 ccgctgaagg cgcttggccg ggcgtcgcag cgcggcccgc gagcaggcct tcgagctgct
     1081 cgcggccgac cggcgcaaag gacaaaagcg ggagctccgt gcgcgggcag tgcgccaagc
     1141 cttcgggcag ggtgcgcagc gcttcgcgcc cgcgcgcctc gagcgcgcgc gctacgggat
     1201 cggcgctgtc cgtagcgctg aaaacgccgt tcaggacgaa gtggatgcgc tcgatcccga
     1261 gtgcgcatag ctcgcaccgc gttcgctccg cctccgcgag cgctgcgtgt tcaggtcgcg
     1321 ccacgagtac gatggccgtc tgggtcgcgt ccctcaaggc ggcccgcgtt gcggcataga
     1381 gtccgcgctg ggcaccgagg ccggcgagcg gcccgaggca cgaaaccccg ccgggactcg
     1441 cttcgatgta cgtggaccac gcagcgggca aaccgagcag gcgcaacgtg tgacccgtcg
     1501 gggccgtgtc gaagacgacg tgctcgaagc gggcggtgtg tgcagcgtca ccgagcagct
     1561 tcgcgaattc gtcgaacgcc gcgatctcga cggtgcacgc gcccgatagt tgctcctcga
     1621 tgctgcgcac cgacgcgtcc ggcaacacgc cgcgatacgg cccgacgacg cgctcgcggt
     1681 agtcgcctgc cgcagcctcc gggtcgagat tgagcgcgga cagacccgaa gcgcccgcga
     1741 tcggcgtcgg ggacgtgccg aggggcgtac cgagcacctc gtcgaggttc gacgccggat
     1801 cggtgctcac gatgagcacg ttcttcccct gccgcgcgag cgagagcgcg gtcgcgctgg
     1861 cgacgctcgt ctttcccacg ccgcccttgc cggtgaagaa gaggtagcgc gggggtgcgt
     1921 cgacgagctg catcgagttt gctcagcagc agctggtttt cttagcggtc gatgcggtgc
     1981 ccgctgacgg tccgcagcag gagctgcccg tcgcgttgac cgccagctcg tgcgccacga
     2041 cgccggcaag cgccgccagc gtttctcgcg acgggtacgt gccgatcgtg gcgacgcgct
     2101 cgtcgaccat ca
//
LOCUS       DATIML010000134         3448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5224994, whole genome shotgun sequence.
ACCESSION   DATIML010000134 DATIML010000000
VERSION     DATIML010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5224994"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VLJ38_02310"
     CDS             complement(<1..189)
                     /locus_tag="VLJ38_02310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38362.1"
                     /translation="MGAVLERAISIRSKKTDDAAFIERLSAQAFGDFQHHAAAATLRL
                     TERPGSTTRLAVRGDERLG"
     gene            515..817
                     /locus_tag="VLJ38_02315"
     CDS             515..817
                     /locus_tag="VLJ38_02315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38363.1"
                     /translation="MVATCEAPSALGEPYRSCYATGVRGDGNACLSAHDDCIQACENP
                     SASAGAGGEGGRGDAGASSTAGGASGHPDGGGAPATGGSGAGAEAGGSPDTGGAAG"
     gene            complement(814..1698)
                     /locus_tag="VLJ38_02320"
     CDS             complement(814..1698)
                     /locus_tag="VLJ38_02320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38364.1"
                     /translation="MKTASALLIAAVVVSAAMASCGNGQDPAVARQASAECLSQAGEL
                     YQKKIAPLLATDQPQTCNQCHLSGVDLSLFVRADMCETRACLVDLGLVDLKDPDQSKV
                     LAWIQRAHPDSALITQDVIDQEYDAFKSFVEEIAHCGGEACPGVRCPAQSDEQGCDSP
                     EDEPSGAVIVADGAACDSVSIETAFRDNVYVWRDRCFPCHFTSQPSTAAGAPLFFDVR
                     SDCNSGALESFHDMVSLGVIDTNDPTQSLLLRKPLDVSKGGVAHGGGAKFDGTSDPSY
                     RSFLSFIEYWIGCGAPAP"
     gene            complement(1695..2768)
                     /gene="nagZ"
                     /locus_tag="VLJ38_02325"
     CDS             complement(1695..2768)
                     /gene="nagZ"
                     /locus_tag="VLJ38_02325"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HSU38365.1"
                     /translation="MSDLARRAASLLTVGFAGKTPDAETTRLLELGVGGVVLFARNVE
                     APAQVAELTRELKRRASAPLLVSIDQEGGSVARLRTGFTRLPAFRALGDTADPALARE
                     LGRVVGSELAAVGIDWNFAPVLDIDTNPANPVIGARALARDPERVAELGSAFALGLSD
                     AGVAPCGKHFPGHGDTRQDSHHELPRLPHTLERLERVELVPFARAIASGIPALMTAHI
                     VFDALDPERPASMSPAVVRGLLRESMGFSGLVVTDDLEMKAIADHFAIEDVALGALAA
                     GVDVLLVCHGAELAHRAIAAIVRGVQSGAISEATLNAAAERVATFAARFARPPLAELD
                     LAVLDSERHRAVVERVLGAGAAT"
     gene            complement(2907..>3448)
                     /locus_tag="VLJ38_02330"
     CDS             complement(2907..>3448)
                     /locus_tag="VLJ38_02330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38366.1"
                     /translation="GLEAIIVKALASDPAQRFQTADEMRAAIDHFLMSAGEIVMESDV
                     AAVVRARLSKERRMVIDAVMTSGRALPEALAKQLLTRRDRTQTPTANSRVFLTAPQPR
                     MRLSSPPPKAATDDDDDAQPTWRPPTKDGEEHSDSGEYGGEHRVPMDFHPEEGESTVR
                     NKQQVFASSRPPRAKRNGI"
BASE COUNT          499 a         1141 c         1256 g          552 t
ORIGIN      
        1 accgagccgc tcgtcgccgc gcacggcgag gcgcgtcgtg ctgccggggc gttccgtgag
       61 gcggagcgtg gcggccgcgg cgtggtgttg aaaatcgccg aacgcctgcg ccgacagccg
      121 ctcgatgaac gcagcgtcgt cagtcttctt cgaccgtatg ctgatggctc gttcgagcac
      181 ggcgcccacg agacaaacat tggtccaccg ctccgcgacg gcaaggtccc gcagcgtgac
      241 tcggacgtca gggtcgctcg cgtgtcgatc gcgacgcgga cgtcacactc ggctgcgcgt
      301 cgcgacgaag cgcgccacga cgaagcgcgc cacgcttttt gcggtcgagt gactcgagcg
      361 ctacgctctc ctcatgcttg gactatctcg ctcgaattct cgttccctcg gtcgaatctt
      421 cggcctcggt acgctggttt cactcgcgct catcgcttgc gccaatcccc ggcccctcgg
      481 gcagctgcgc gacggcgacg ccgcttgtga agacatggtc gcaacgtgtg aggcaccgtc
      541 cgcgctgggc gagccgtatc gcagctgtta cgcgacgggc gttcgcggcg acggcaacgc
      601 gtgcctcagc gctcacgacg actgcatcca agcgtgcgag aacccgtccg cgtcggctgg
      661 cgcgggtggc gagggcggtc gcggcgacgc gggcgcgtcg agcacggccg gcggcgcgag
      721 cggtcacccg gatggcggtg gtgcccccgc gacgggcggc agcggagccg gagcggaggc
      781 gggcggctcg ccggatacgg gcggcgcagc gggctaaggc gccggcgcgc cgcagccgat
      841 ccagtactcg atgaacgaga gaaacgagcg gtaagacgga tcgctcgtgc cgtcgaattt
      901 tgcgccgccg ccgtgcgcga cgccgccctt gctcacgtcg agcggtttgc gcaaaagcag
      961 gctctgcgtg gggtcgttcg tgtcgatgac gccgagcgac accatgtcgt ggaagctctc
     1021 gagtgcgccc gagttgcagt cgctgcggac gtcgaagaag agcggcgcac cggcggccgt
     1081 gctcggttga ctcgtgaaat ggcaggggaa acaacggtcg cgccacacgt agacgttgtc
     1141 gcgaaaggcg gtttcgatcg aaaccgaatc gcacgcggcg ccgtccgcca cgatgacggc
     1201 gccgctcggc tcgtcctcgg ggctgtcgca gccttgctcg tcgctttgcg ccgggcagcg
     1261 cacgccgggg cacgcttccc cgccgcagtg cgcgatctct tcgacgaacg atttgaacgc
     1321 gtcgtactcc tgatcgatca cgtcttgcgt gatgagcgcg ctgtccgggt gcgcgcgctg
     1381 gatccaagcg agcaccttgc tctggtcggg gtctttcagg tcgaccaagc cgaggtcgac
     1441 caagcacgcc cgcgtttcgc acatgtccgc gcgcacgaac aagctcaaat cgacgccgga
     1501 gaggtgacac tgattgcacg tctgcggctg atcggtcgcg agcagcggcg cgatcttctt
     1561 ttgatacagc tcgcccgctt gcgacaggca ttcggcggac gcttggcgcg cgacggcggg
     1621 atcttggccg ttcccgcagc tggccatggc agccgagacg accacggcgg cgatcagcag
     1681 cgccgacgcc gttttcaagt cgcggctccc gcgccgagca cgcgctcgac gacggcgcgg
     1741 tggcgttcgc tgtcgagcac ggcgaggtcg agctcggcga gcggtgggcg cgcaaagcgc
     1801 gcggcgaagg tggcgacgcg ctcggctgcg gcgttcaaag tagcttcgct gatcgcgccg
     1861 ctctgcacgc ctcgaacgat ggcagcgatg gcgcggtgcg caagctcggc gccgtgacac
     1921 acgagtagga catcgacgcc cgcggcgagc gcgccgagcg ccacgtcctc gatcgcgaag
     1981 tggtcggcga tcgctttcat ctccagatcg tcggtgacga cgaggcctga aaatcccatg
     2041 ctttcgcgca atagtccgcg caccacggcg gggctcatgc tcgcgggacg ttcgggatcg
     2101 agcgcgtcga acacgatgtg cgccgtcatg agcgcgggta tgccgctcgc gatggcgcgc
     2161 gcgaaaggta cgagctcgac gcgttcgagc cgctcgagcg tgtgcggcaa gcgcggcagc
     2221 tcgtgatgcg agtcttggcg cgtatcaccg tgacccggga aatgcttgcc gcacggtgcg
     2281 acgcccgcgt cgctgaggcc gagcgcgaac gcgctgccga gctctgcgac gcgctcgggg
     2341 tcgcgggcga gggcgcgagc cccgatcacg gggttcgctg ggttcgtgtc gatgtcgagc
     2401 acgggcgcga aattccagtc gatgcccacg gcggcaagct cgctgccgac gacgcgcccg
     2461 agctcgcggg ccagcgccgg atcagccgta tcgccgagcg cgcggaaggc gggcaggcgc
     2521 gtgaagccgg tgcgcaggcg cgcgacgctg ccgccttctt ggtcgatcga gacgaggagc
     2581 ggcgccgagg cgcggcgttt gagttcgcgc gtgagctcgg cgacttgggc gggcgcctcg
     2641 acgttgcgcg cgaacaggac gacgccgccg acgccgagct cgagcaggcg cgtggtttcg
     2701 gcgtcgggcg ttttgcccgc gaagccgacc gtcagtaggc tcgccgcgcg tcgcgcgaga
     2761 tcgctcacgc ggaggagtgt agatcagggc gccgcaccgg gccgtgcggc gtgaacgctg
     2821 gaacggcgcg cgcggagact tggcgccccg acgcacgccg gtcgcccctc aagctccagc
     2881 cgatcacgcc ttgggcgcgt tcaggctcag atgccgttcc gcttcgcgcg gggcgggcgg
     2941 ctgctcgcga acacttgctg cttgttgcgc acggtgctct cgccctcttc ggggtgaaag
     3001 tccatgggca cgcggtgctc gccgccgtac tcgccggagt cgctgtgctc ctcgccgtcc
     3061 ttcgtgggcg gacgccacgt gggctgcgcg tcgtcgtcgt cgtcggtcgc agctttgggc
     3121 ggcggcgagg acaggcgcat gcgcggctgc ggcgccgtga gaaagactcg gctatttgcg
     3181 gtcggcgtct gggtgcggtc gcggcgcgtg agcagctgct tggcgagcgc ttcgggcagc
     3241 gcgcgacccg aggtcatcac ggcgtcgatc accatgcgcc gctctttgct cagacgtgcg
     3301 cgcacgacgg ccgcaacatc gctctccatc acgatttcgc ccgcgctcat caggaagtga
     3361 tcgatggcgg cgcgcatctc gtccgcggtt tggaagcgct gtgcgggatc ggaggcgagc
     3421 gccttgacga tgatggcttc gagccccg
//
LOCUS       DATIML010000135         5163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3203825, whole genome shotgun sequence.
ACCESSION   DATIML010000135 DATIML010000000
VERSION     DATIML010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5163
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3203825"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..767
                     /locus_tag="VLJ38_02335"
     CDS             30..767
                     /locus_tag="VLJ38_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU38367.1"
                     /translation="MSPMLTIAKREFRSYFDAPLAYVVMCLSFLALGFMFFMLRGGFW
                     QVDRASVQKVFEYTPWGLSLLVIPVVTMRLIAEERRSGTLEMLITLPVKDSDVIAGKY
                     LGALGLVLVLVLGTLLYPLAMFKAPWHLGPLDLGPVWSGYLGLVLFSAASVAIGLLIS
                     SFVESQAVAFFLTFAVLGTLWFLDDLAEVSGQGVVANALRYVSFQTRLSGFWRGLIDT
                     RDVIYFLSVTAIALVVSFRALERRKWA"
     gene            800..2641
                     /locus_tag="VLJ38_02340"
     CDS             800..2641
                     /locus_tag="VLJ38_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gldg family protein"
                     /protein_id="HSU38368.1"
                     /translation="MATEDQKKKAAAQTGLYVLVIVAIVVIANMLSAKVYKRADVTQA
                     ERFTLSQGSGRLLSTLKQPIQVDAYVKTGLPQLDAFVADLTDLLKEYEHAGKGKFKFT
                     LIEANTDELRSQAKEAGLQEQPFVDPSQTSEDQAAVAQGYMGLVFKYESEKTVIPFLS
                     PQSQDGLEFWITNKIREIRDKADDIKHRIGVITDKDELKLDDQNLVPKQGKQGSPTMK
                     SIMEQNFPFYKMEEVKLSESAPIDKDLVGLIITQPRKDYTERELRRIDEFMLRGGKAL
                     VVYASAVTLKPQDATMSATLDTHNLDKLLSGYGIQMNKDAVLDFGAQFRLPVRTQSGV
                     GWIRDPGIIHVVNDSRLGDDERSIDNSFPPFFRLEELAFPFASSLKILRDKQPSDVKL
                     AAVARSTPQSSVDKGPTVDMRLRLDWSPKPPQESRVIAAYAQGKLKSAFAGGTAEPGI
                     TVPDRAPTDSRVLVVSSSLFLTNPFAYAGNGPDLGGQFAMFGNVGGDENLLRIAQPYV
                     EYLTNTIISFKNTLDWLSGDSDLVAASAKLIGDPHLVYADVAKPKFKSEDDPAEIKRK
                     DEDYRNSRKSLQRNVQWTLTLGIPLLFGAFGLFRWRRRESMRAELKV"
     gene            2656..3735
                     /locus_tag="VLJ38_02345"
     CDS             2656..3735
                     /locus_tag="VLJ38_02345"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HSU38369.1"
                     /translation="MTPEIKLYAAVGVLAVLGGALFLTNKKQKEEEASYTLSGQTANL
                     PKVAITDDDVKAIDKIVLTKGGDEDAGAPRDIELTKKDDKWRLTRPVDAEANESNVKS
                     LLDNLKTLKVSEVIDPGKSSYDQYKVSDKKGLHAVFTKGGTTVLDAWFGENGGRGQMA
                     RLAGHDGVYAVKGYSSYLYDRDAKGWRDSTIFKFEDTAVTGVTVDNEHANFVFTKTGD
                     TWSAKYREQKIGTPKDLEKFDDGKLKDMLRAYKGLNADGFADKSKTAADLGLDKPTAT
                     VVITLNDGAKREVKVGATAEGSSRWVQASGLNDFVSISSWAADWALAEPKKFQKADEA
                     KKDEKKDDKAKPASAPKPAGSAKPG"
     gene            3838..4125
                     /locus_tag="VLJ38_02350"
     CDS             3838..4125
                     /locus_tag="VLJ38_02350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38370.1"
                     /translation="MTGKPSFETVFKLTGYHLGAAAVGFMLAAALFAPKPRVVAPVPE
                     RTLKVLELRNQARAAASASSGAAVARAVELCKALAWPACDEASVRAMGTGP"
     gene            4122..4619
                     /locus_tag="VLJ38_02355"
     CDS             4122..4619
                     /locus_tag="VLJ38_02355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38371.1"
                     /translation="MTAPPVDVDLGAPFVRTRRPVWLTPALVGLATLVLTSLSIRSAA
                     ERQEPILDSMEIQPFEAAATLAYAWGSTADASALERQVLALAERQRGAEPSARARSSS
                     EPDFAALRRMDADMAKFRLAVLEGASRPTFERLCAAATIRCNVYTLDSLINMLEKQRL
                     VHAAR"
     gene            4662..>5163
                     /locus_tag="VLJ38_02360"
     CDS             4662..>5163
                     /locus_tag="VLJ38_02360"
                     /inference="COORDINATES: protein motif:HMM:NF013734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HSU38372.1"
                     /translation="MRVSYNWLRELLPELTLSPGEVADRLNGVGLAVDRVEPRGQALA
                     EVRLARVTALEAHPKRSGLRLVTIDHGRGTQRVVCGAANVPEPGGMVVLAPLGARLPS
                     LPEPLAAREIGGVLSEGMLVSESELGLTAAAEGIIVLPAGAAEPGRTLAELVPSAVDT
                     IFELDVT"
BASE COUNT          944 a         1733 c         1673 g          813 t
ORIGIN      
        1 ccaagcccgc ggcgcgaaag ggctgatcca tgtccccgat gttgacgatt gcgaaacgcg
       61 aatttcgttc ctacttcgat gcaccgctcg cctacgtggt gatgtgcctg agctttttgg
      121 cgctcggctt catgttcttc atgctgcgcg gcgggttctg gcaggtggac cgcgcgtccg
      181 tgcagaaggt gttcgagtac acgccgtggg ggctgagctt gctcgtgatc cccgtcgtga
      241 cgatgcggct catcgcggaa gagcggcgca gcggcacgct cgagatgctc atcacgctgc
      301 ccgtgaagga cagcgacgtg atcgccggga agtacctcgg cgcgctcggc ctcgtgctgg
      361 tgctcgtgct cggcacgctg ctctacccgc tcgcgatgtt caaggcgccg tggcacctag
      421 gcccgctcga tctcgggccc gtgtggagcg gctacctcgg cctcgtcttg ttctcggcgg
      481 cgtcggtggc catcggcctg ctcatcagct cgttcgtcga gagccaggcc gtcgcgttct
      541 ttctcacctt cgccgtgctc ggcacgctct ggttcttgga cgatctcgcc gaggtctccg
      601 gccaaggcgt ggtcgccaac gcgctccgtt acgtgagctt ccaaacgcgc ttgagtggtt
      661 tctggcgcgg gctcatcgat acgcgtgacg tgatttactt cctgtccgta acggcgatcg
      721 ctctcgtcgt ttctttccgg gcgctcgaac gccgcaagtg ggcgtgagcg gggaccccgc
      781 gcctttttag gatttttcga tggcaaccga agaccaaaag aagaaagccg cagcccagac
      841 gggcctgtac gtgctcgtga tcgtggcgat cgtcgtgatc gcgaacatgc tgtcggccaa
      901 ggtttacaag cgcgccgacg tgacgcaggc cgagcgcttc acgctgagcc aaggcagcgg
      961 acgcttgctc tcgacgctca agcagccgat tcaggtcgac gcctacgtca agaccggcct
     1021 gccgcagctc gacgccttcg tcgccgatct caccgacttg ctcaaggagt acgagcacgc
     1081 cggtaagggc aagttcaagt tcacgctgat cgaggcgaac acggacgagc tccgcagcca
     1141 ggcgaaagaa gccggcctgc aggagcagcc gttcgtcgat ccgagccaga cgagcgagga
     1201 tcaggccgcc gtcgcgcagg gctacatggg cctcgtcttc aagtacgaga gcgaaaagac
     1261 ggtgatcccg tttttgagcc cccagagcca ggacggcctc gaattctgga tcacgaacaa
     1321 gatccgcgag attcgcgaca aggccgacga catcaagcac cgcatcggcg tcatcacgga
     1381 caaggacgag ctgaagctcg acgatcagaa cctcgtgccg aagcagggca agcagggctc
     1441 gcccaccatg aagtcgatca tggagcaaaa cttcccgttt tataaaatgg aggaagtgaa
     1501 gctcagcgag tcggcgccga tcgacaagga tctcgtcggg ctcatcatca ctcagccgcg
     1561 taaggactac acggagcggg agctccgtcg catcgacgag ttcatgctgc gcggcggtaa
     1621 ggcgctcgtc gtgtacgcgt cggccgtcac gctcaagccg caagacgcga cgatgagcgc
     1681 gacgctcgac acgcataacc tcgacaagct gctctccggc tacggcatcc agatgaacaa
     1741 ggacgccgtg ctcgacttcg gcgcgcagtt ccggctgccc gtgcgcacgc agagcggcgt
     1801 cggctggatc cgcgatccgg gcatcatcca cgtcgtcaac gactcacgtc tcggcgacga
     1861 cgagcgctcg atcgacaact ccttcccgcc ctttttccgg ctcgaggagt tggcgttccc
     1921 gttcgcgtcg agcttgaaga tcctgcgcga caagcagcct tccgacgtga agctcgccgc
     1981 cgtggcccgt tcgacgccgc agtcgtcggt cgacaaggga cccacggtcg acatgcgctt
     2041 gcgcctcgac tggagcccga agccgccgca ggagtcgcgc gtcatcgcgg cttacgcgca
     2101 gggcaagctc aagagcgcct tcgccggtgg cacggcggag ccgggcatca cggtgccgga
     2161 ccgcgcgccc acggattcgc gcgtgctcgt ggtctcgtcg agcttgttcc tcacgaaccc
     2221 gttcgcttac gcgggtaacg gccccgacct cggcgggcag ttcgcgatgt tcggcaacgt
     2281 gggcggcgac gagaatctgc tgcgcatcgc gcagccgtac gtcgagtacc tcaccaacac
     2341 gatcatctcg ttcaagaaca cgctcgactg gctctcgggc gactccgacc tcgtcgccgc
     2401 gagcgcgaag ctcatcggcg acccgcactt ggtctacgcc gacgtcgcca agcccaaatt
     2461 caagagcgag gacgacccgg ccgaaatcaa gcgcaaggac gaggactacc ggaactcgag
     2521 gaagagcctg cagcgcaacg tccagtggac gctgacgctc gggatcccgc tcttgttcgg
     2581 cgccttcggc ctcttccgct ggcgccgccg cgagtccatg cgggccgagc tcaaggtctg
     2641 aagggtagaa tagacatgac cccggagatt aaactttacg cagcagtcgg cgtgctcgcc
     2701 gtgctcggcg gtgccctctt tctcaccaac aaaaaacaaa aagaagaaga ggcgtcgtac
     2761 acgctgtccg gccagaccgc gaacctgccg aaggtcgcga tcaccgacga cgacgtgaag
     2821 gcgatcgaca agatcgtgct caccaagggt ggagacgaag acgccggcgc cccgcgcgac
     2881 atcgagctca cgaagaagga cgacaagtgg cgcctcacgc ggccggtcga tgccgaagcg
     2941 aacgagtcga acgtgaagag cctgctcgat aacctgaaga cgctcaaggt gagcgaggtc
     3001 atcgacccag gtaagtcgag ctacgaccag tacaaggtat ccgacaagaa gggcctgcac
     3061 gccgtcttca ccaagggcgg cacgacggtg ctcgacgcct ggttcggcga gaacggcggc
     3121 cgcggacaga tggcgcggct cgcgggtcac gacggcgtct acgccgtgaa gggctactcg
     3181 agctacctgt acgaccgcga cgcgaagggc tggcgcgaca gcacgatctt caagttcgag
     3241 gacacggccg tcaccggcgt caccgtcgac aacgagcacg ccaatttcgt gttcacgaag
     3301 acgggcgaca cgtggagcgc gaagtaccgc gagcagaaga tcggtacgcc caaggacctc
     3361 gagaagttcg acgacggcaa gctcaaggac atgctgcgcg cgtacaaagg cctgaacgcc
     3421 gacggcttcg ccgacaagtc caagaccgcc gcggatctcg gcctcgacaa gccgacggcc
     3481 acggtcgtca tcacgctcaa cgacggcgcc aagcgcgaag tgaaggtcgg cgcgaccgcc
     3541 gagggctcga gccgctgggt ccaagcgtcc ggcctgaacg acttcgtcag catctcgtcc
     3601 tgggccgccg attgggcgct cgccgagccg aagaagttcc agaaggccga cgaggcgaag
     3661 aaggacgaaa agaaagacga caaggcgaag cccgcctcgg cgcccaagcc cgcgggcagc
     3721 gccaaacccg gctgagcgat tccgtccaag cgtctcgggg cagtgcgcca cgccccgaga
     3781 cgcgccacta tccacacgcg ccgagcgtca ccgccgcacc gcgtctaaac ttgcgcggtg
     3841 accgggaagc cgagcttcga gacggtcttc aagctgactg ggtatcacct cggcgcggcc
     3901 gcggtcggct tcatgttggc agcggcgctc ttcgcgccga agccgcgcgt cgtcgcgccg
     3961 gtgcccgagc gcacgctcaa agtgctcgag ctgcggaacc aagcgcgcgc cgctgcgagt
     4021 gcctcctccg gcgcggcggt ggctcgcgcc gtcgagcttt gcaaggcact cgcttggccg
     4081 gcgtgcgacg aggcttcggt gcgggccatg gggacagggc cgtgacggcg cctcccgtcg
     4141 acgtggacct cggggcgcca ttcgtgcgaa cgcgacgtcc ggtctggctc acgccggcgc
     4201 tcgtcggtct cgccacgctc gtgctcacgt cgctgtcgat ccgaagcgcc gccgaacgcc
     4261 aagagcccat cctcgactcg atggaaatcc aaccgttcga agccgcggcg acgctcgcct
     4321 atgcctgggg ctcgaccgcg gacgcgagcg cgctcgagcg gcaagtcctc gccctggccg
     4381 aacggcagcg tggcgccgaa ccgtccgcgc gcgcccgctc gagcagcgag cccgactttg
     4441 cagccctgcg ccggatggac gccgatatgg ccaaattccg gctcgccgtg ctcgaaggcg
     4501 cgtcccgccc cacgttcgag cgcctctgcg ccgccgccac gatccgttgc aacgtgtaca
     4561 cgctcgacag tctgatcaac atgctcgaaa agcagcgcct ggttcacgcg gcacgctgag
     4621 ttgcccgcac cggcccaccg gcgtactaca cgcggcccgt catgcgcgtt tcttacaact
     4681 ggctccgcga gctcttgccc gagctcactc tgtcccccgg cgaagtcgcc gaccggctga
     4741 acggggtcgg cctcgccgtc gaccgcgtcg agccgcgcgg ccaggcgctc gccgaagtgc
     4801 ggctcgcgcg cgtgacggcg ctcgaagcgc acccgaagcg ctccggactg cggctcgtga
     4861 cgatcgatca cgggcgcgga acgcagcggg tcgtctgcgg cgccgccaat gtgccggagc
     4921 cgggcggcat ggtcgtgctc gcgccactcg gtgcgcgctt gccgtcacta cccgaaccgc
     4981 tcgcagcccg ggagatcggg ggcgtgctga gcgaaggcat gctcgtgagt gagagtgagc
     5041 tcgggctcac ggccgcggcc gaaggcatca tcgtgctgcc ggccggagcg gcggaaccgg
     5101 gccgcacgct cgccgagctc gtgccgagcg cggtcgacac gattttcgag ctcgacgtga
     5161 cgc
//
LOCUS       DATIML010000136         3253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4358306, whole genome shotgun sequence.
ACCESSION   DATIML010000136 DATIML010000000
VERSION     DATIML010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4358306"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..954)
                     /locus_tag="VLJ38_02365"
     CDS             complement(154..954)
                     /locus_tag="VLJ38_02365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38373.1"
                     /translation="MLLGPDFDGSDQGYQTLARATGLLPYDLRTRVKPGSFGLIKAFG
                     QAAQAEELAARLVAAGFPVVCVDRQVVNDPDRRHVPVHQLELGPSSFHLKLRDREMDV
                     PYGALTCIVEGEVQPGRTGGTPAPGVASSGALRAVTPGSGEMQVFREAHLTAAIGYLA
                     ADLHFATVLWIARIDARIFDFGPHRSGNLAVDLANLTNELAGRAQVRVDRNVRVSSVA
                     SFAEQPPPMRAGSPQPQSLRGKVEAVDARFDSYSRMVGEAERVGRRRL"
     gene            1241..2500
                     /locus_tag="VLJ38_02370"
     CDS             1241..2500
                     /locus_tag="VLJ38_02370"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSU38374.1"
                     /translation="MTIQRRTLANGLRVVLVPEASSPTVAVAVTYGVGSRQETAGKSG
                     FAHLFEHMMFEGSEHVKKGQHFQLISERGGSLNGTTNSDRTNYYEVLPAGELELALWL
                     ESDRMRALDVSAENFENQRSVVKEEYRMRYQNVPYMLGALRLGELVFANYPPYANPTI
                     GKMEDLDRAEVGWARDFYAHHYAPNNAVLTIAGNFDADHALDLIDRYFGKIPTRSVEM
                     QALPTTLPEAKSAREKVEDANAKTPAVFYSWLIPASHTPEHYALELVAMLLGDGDSAR
                     LYQELVRNRAVAQEAHAFTRDFAGPDAFTLQAVLAERADLATVERALDAELDKVRKKP
                     PSEAELKRLKTRLRSGFVFGLESSLSRAMELGEYELLWGDARGIAHELAHYDAVTPKD
                     MQAAAARYLDDARRVVVEITPKPKAAP"
     gene            2497..>3253
                     /locus_tag="VLJ38_02375"
     CDS             2497..>3253
                     /locus_tag="VLJ38_02375"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSU38375.1"
                     /translation="MKHSAAFLLALAAACAAPAPSPPPRVPTAPAPPPSAPPVATADP
                     LAEAPSSPVRPTVPFPSIVHRHLTGGLDLAIVPRPGFPVVELRLIVLSGQATDGNLPG
                     LAALTGKLLKDGGAGPWSSRELAEKTEALGAHLSIGTDRDATRIGLGVTSDKLDPALD
                     ILAALAERPRFPAAEFAKLRQREIDRVKDRARTSPSWLASMVLYRELYELPVSIHPYA
                     RYDALPEEMAELKLEHVKRWYKDQFTPENAVLVV"
BASE COUNT          575 a         1186 c         1018 g          474 t
ORIGIN      
        1 ggggcgggcg tcgacgaaaa cgacaagcac gcccgcgccc tggtccagca cgcgcgcgag
       61 ctctgccgcc atggcgcgaa agcggagtgc gccggcggcg agccgaagta gctcgcgcgg
      121 ggcgatcgtg ggagggaaag ccgaggctgg cgctcagagc cgacgccgtc ccacgcgttc
      181 agcctccccg accatgcgcg agtaggagtc gaaacgcgcg tccaccgcct ccactttgcc
      241 gcgcaggctc tgcggctgcg gcgagcccgc gcgcatcggc ggcggctgct cggcgaacga
      301 ggcgacgctc gacacgcgca cgttccgatc cacccgcact tgcgcgcgcc ccgcgagctc
      361 gttcgtgaga ttcgcgaggt ctacggcgag attcccgctg cggtgcgggc cgaaatcgaa
      421 gatccgcgcg tcgatgcgcg caatccagag cacggtagca aagtgaagat ccgccgcgag
      481 gtaaccgata gcagccgtga gatgcgcttc ccgaaacacc tgcatctcgc cgctccccgg
      541 cgtgaccgcc cgcagcgccc cgctgcttgc cacaccggga gccggcgtgc cgcccgtgcg
      601 tcccggctgc acctcgcctt cgacgatgca ggtgagcgcg ccgtacggca cgtccatctc
      661 gcggtccctg agcttcaggt gaaaactcga cgggccgagc tcgagctgat gcacgggaac
      721 atgccgccgg tcaggatcgt ttacgacctg acgatcgacg cacacgacgg gaaacccggc
      781 agcgacgagc cgcgccgcga gctcttcggc ctgcgcggcc tggccgaatg ccttgatcaa
      841 cccaaagctc cccggcttca cgcgcgtgcg gaggtcgtac ggtaaaaggc ccgtcgcgcg
      901 cgccagggtc tgatacccct gatcgctgcc gtcgaaatcg ggaccgagca gcaccagcac
      961 taaaatccta gactacgacc atgctccgaa ttcgccaaat cggcgacagc actcgcgtga
     1021 gacttcgata agcatgacag aacctgtggt aaagcgcccc atgcgccact catcgcgttt
     1081 tgcggcagcg gtcccaaaac tccgtacggc agtcgcgttg cttgcggcgg ctgcaggcac
     1141 gcaagtcttc ccggcgggcg ccgaaaccgc tttcgcacga gcggctgcgc ctgccgccgt
     1201 atcctcgccc gatccatcag cggcgctcga acgtttcgtg gtgacgattc agcgtcgcac
     1261 gctcgcgaac ggcctgcgcg tggtgctcgt gcctgaagcg agctcgccga ccgtcgccgt
     1321 ggcggtgacc tacggcgtcg gctcacgtca ggaaaccgcc ggcaagagcg gctttgccca
     1381 tttgttcgag cacatgatgt tcgagggcag cgagcacgtg aagaaaggcc agcatttcca
     1441 gctcatcagc gagcgcggcg gctccttgaa cggcacgacc aactccgacc gcaccaacta
     1501 ctacgaggtg ctgcccgccg gtgagctcga gctcgccctc tggctcgagt cggatcgcat
     1561 gcgcgcgctc gacgtctcgg ccgaaaactt cgagaaccag cgctcggtcg tcaaagaaga
     1621 gtaccgcatg cgctaccaga acgtgccgta catgctgggc gcgctccgct tgggcgagct
     1681 cgtcttcgcc aactacccgc cgtacgccaa ccccaccatc ggcaagatgg aggacctcga
     1741 tcgcgccgag gtcggttggg cgcgcgactt ttacgcacac cactacgcgc cgaacaacgc
     1801 cgtgctcacc atcgcgggca acttcgacgc cgaccacgcg ctcgatttga tcgatcgcta
     1861 cttcggaaaa attccgacac gcagcgtcga aatgcaagcg ctgcccacga cgctgcccga
     1921 agcgaagtcc gcacgcgaga aggtcgagga cgcgaacgcc aagacgcccg ccgtcttcta
     1981 ctcctggctc atcccagcga gccacacgcc cgagcactac gcgctcgagc tcgtcgccat
     2041 gctgctcggt gacggcgaca gcgcgcgcct ctaccaagag ctcgtgcgaa accgcgcggt
     2101 cgcgcaggaa gcccacgcct tcacgcgcga tttcgcggga cccgacgctt tcacgctaca
     2161 ggccgtgctc gccgaacgcg ccgacctcgc caccgtcgaa cgcgccctcg acgccgagct
     2221 cgacaaggtg aggaaaaaac cgccgagcga ggccgagctc aaacgcttga aaacgcggct
     2281 gcgctcgggc ttcgtgttcg ggctcgaatc gtcgctcagt cgcgcgatgg agctcggcga
     2341 gtacgagctc ttgtggggcg acgcgcgcgg catcgcgcac gagctcgcgc attacgacgc
     2401 cgtgacgccg aaggacatgc aggccgccgc cgcgcgctac ctcgatgacg cacgccgcgt
     2461 cgtcgtcgaa atcacgccca aacccaaagc cgcaccatga agcactccgc cgccttcctt
     2521 ctcgcactcg ccgcagcctg cgcggcgccc gcaccctcgc cgccgccgcg cgtcccgacg
     2581 gcgcccgctc ctccgccgag cgcgccgccg gtcgcgaccg ccgatccgct ggcggaggcg
     2641 ccctcgtcgc cggtgcgtcc gaccgttccc ttcccgagca tcgttcatcg ccacctcacg
     2701 ggggggctcg atctcgcgat cgtgccgcgc cccgggtttc ccgtggtcga gctccggctg
     2761 atcgtgctgt cgggccaagc cacggacggc aacttgccgg ggctcgccgc gctcacgggc
     2821 aagctgctca aagacggcgg ggccggcccc tggtcgagcc gtgagctcgc cgaaaagacg
     2881 gaggcgctcg gcgcgcacct ctcgattggt acggatcgcg acgcgacgcg catcggcctc
     2941 ggcgtaacga gcgacaagct cgacccggcg ctcgacatcc tcgcggcgct ggccgaacgg
     3001 ccgcgttttc cagccgccga gttcgcgaag ctgcggcagc gtgagatcga ccgcgtcaaa
     3061 gaccgcgcgc gcacgagccc gagctggctc gcctcgatgg tgctctaccg cgagctctac
     3121 gagcttcccg tctcgatcca cccgtacgct cgttacgacg cgctgcccga agaaatggcc
     3181 gagctcaagc tcgaacacgt gaagcgttgg tacaaagacc agttcacgcc cgagaacgcc
     3241 gtgctcgtcg tca
//
LOCUS       DATIML010000137         2561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_893206, whole genome shotgun sequence.
ACCESSION   DATIML010000137 DATIML010000000
VERSION     DATIML010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_893206"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1313)
                     /locus_tag="VLJ38_02380"
     CDS             complement(<1..1313)
                     /locus_tag="VLJ38_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38376.1"
                     /translation="MTQAAVRGERRARRAKAKTGRLTRWLPRISAAFGVLLGLLWWAV
                     HRYDWMGPLVANGLRSVVGVGAVARLEDFVYAVEDRYNRLARGSEAPKSYWAVPASAP
                     LPAPRAAAVVPAPATSGERPVRAPFHPADPGPALKSWAAPGDGVWVPIVDPRRPEEAP
                     YLWKTLLHPDKERGWAEVFVVAIDVKHVTLHVVPGTQEPKSDNPAGEKIERPAVIPER
                     DHEELLAAFNGGFMTEHGGYGMKLDGVTIVAPKPKACTIAVYDDGELRIAPWTELQAD
                     AAKMLWFRQAPECMVHGNKLHPGILYLSGNRKWGATLDGETVIRRSAIGLNAARDVLY
                     VSITNHTNARVLAEGMRHAGAVDVAQLDVNWSYPKFVLFEPKEPGGPRKAVALASGFE
                     FSEDEYIRKRARRDFFYLVRKPDVTAETARKPDVTAETARKPDATA"
     gene            1446..>2561
                     /locus_tag="VLJ38_02385"
     CDS             1446..>2561
                     /locus_tag="VLJ38_02385"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HSU38377.1"
                     /translation="MRSAWLWRLAALIVVLAGPAFAEAPLGASAAPAPSAPPPASATP
                     APSATPAPSAAPAPSDPAEQAARSRAPVLPPSLGQELEGRPIVRVEVVVEGGRFGQPT
                     SVTRVRAGQAFSAEAARRALQELTDSGRFADVKLEVEEAGAGVILRLRALPRRVVARL
                     ELSGSPIPDDELLRAAGLHVGDDLTGPDLPRVAERMQEALARRGFPRAVVTALALDTD
                     DPLNVVVTLEVKAGAPERVVDRWFGVWPDPNAIGMRSVLAGYAVGRGDRADTEALATA
                     DKDLKGALRAHGWHRAEVTHRLESKPGGVFLRVEVQAGPLIELVFEGNRSFDASALED
                     ALGLEDSEERDPQVLVDRVHDFYEDHGFFDADVRVEER"
BASE COUNT          352 a          891 c          905 g          413 t
ORIGIN      
        1 gccgtcgcgt cgggtttgcg cgccgtctcg gcggtcacgt cgggcttgcg cgccgtctcg
       61 gcggtcacgt cgggtttgcg cacgaggtag aagaagtctc ggcgcgcgcg cttgcgaatg
      121 tactcgtctt cggaaaattc gaagccgctc gcgagcgcga cggccttgcg cgggccgccc
      181 ggctccttcg gctcgaacag cacgaatttc ggatacgacc agttcacgtc gagctgcgcc
      241 acgtcgacgg cgcccgcgtg gcgcatccct tcggcgagca cgcgagcgtt cgtgtggttg
      301 gtgatggaga cgtagagcac gtcgcgcgcc gcgttgagcc cgatcgccga gcgccggatc
      361 acggtttccc cgtcgagcgt cgcgccccat ttgcggttgc ccgaaagata cagaatcccg
      421 gggtgaagct tgttgccgtg caccatgcat tcaggcgcct gccggaacca cagcatcttc
      481 gcggcgtcgg cttgaagctc ggtccagggc gcgatgcgca gctcaccatc gtcgtacacg
      541 gcgatggtgc acgccttggg tttcggcgcg acgatggtga cgccgtcgag tttcatgccg
      601 tagccgccgt gctcggtcat gaagccgccg ttgaacgcgg cgagcagctc ctcgtgatcg
      661 cgctccggaa tcacggctgg ccgctcgatc ttctcccccg cagggttgtc cgacttcggc
      721 tcctgcgttc caggcacgac gtgaagcgtc acgtgcttca cgtcgatcgc gaccacgaac
      781 acttcggccc agccgcgctc tttgtcgggg tggagcaggg tcttccacag gtacggcgct
      841 tcctccgggc ggcggggatc gacgatcggc acccagacgc cgtcgccggg cgccgcccac
      901 gatttgagcg ccggccccgg atcggccgga tgaaacggcg ctcggacggg tcgttcaccg
      961 ctcgtcgccg gcgccgggac gaccgctgcc gcgcgtggcg ccggcagcgg cgcgctcgca
     1021 gggacggccc agtacgattt gggcgcctcg ctgccgcgcg cgagccggtt gtaacgatct
     1081 tcgacggcgt acacgaagtc ttccagacgg gctaccgcac ccaccccgac caccgagcgc
     1141 aacccgttcg ccacgagcgg gcccatccag tcgtagcgat ggacggccca ccagagcagg
     1201 ccgagcagga ccccgaatgc cgcggaaatg cgcggcaacc agcgcgtcag gcgtccggtc
     1261 ttggccttcg cccgacgagc tcggcgctcg ccacgaacgg cggcctgcgt catcccgctc
     1321 tgatagccca atccgcgtga tccggcgaat ctacgacccg tttggatccg cgagcggcct
     1381 cgctcggcgc gcctcgcgac gacggacgcg actttcgcgc gtgaacctgt actaaaacaa
     1441 gcgcgatgcg ctcggcatgg ctctggcggc tcgccgcgct catcgtggtg cttgccgggc
     1501 cagccttcgc cgaggctccg ctcggagcat ccgcggctcc agcgccctcc gcgccgcccc
     1561 cagcgtcggc gactcccgcg ccatcggcga ctcccgcgcc atcggctgcg cccgcgccct
     1621 ccgaccccgc cgagcaggcg gcgcgctcgc gtgcgccggt tttgccgcct tctctcgggc
     1681 aagagctcga ggggcgtccg atcgtacgcg tcgaagtcgt cgtcgagggc gggcgtttcg
     1741 ggcagccgac gagcgtcacg cgtgtccgcg ccgggcaggc gttttcggct gaagcggcgc
     1801 ggcgtgcgct ccaagagctg acggatagcg ggcgtttcgc cgacgtgaag ctcgaggtcg
     1861 aggaggccgg cgccggcgtg atcttgcgct tgcgggcgct gccgcgccgc gtcgtggcgc
     1921 gcctcgagct ttcaggctcg cccattccgg acgacgagct gctccgcgcc gccggcctac
     1981 acgtgggtga cgatttgacg gggccggatc tgccgcgcgt cgccgagcgc atgcaggagg
     2041 cgctcgcgcg tcgtggcttc ccgcgggcgg tcgtgacggc gctcgcgctc gatacggacg
     2101 atccgctgaa cgtcgtcgtg acgctcgagg tgaaagccgg agcgccggaa cgtgtggtcg
     2161 atcgctggtt cggcgtgtgg cccgatccga acgcgatcgg gatgcgttcc gtgctcgccg
     2221 ggtacgcggt cgggcgcggc gatcgcgcgg acacggaggc gctcgcgacg gccgacaagg
     2281 acctgaaagg ggcgctgcgc gcgcatggct ggcaccgcgc cgaggtcacg caccgcctcg
     2341 agtcgaagcc gggcggggtg ttcttgcgcg tcgaggtgca ggcaggtccg ctgatcgagc
     2401 tcgtgttcga gggcaatcgc agcttcgacg cgagcgcgct cgaggacgcg ctcgggctcg
     2461 aggacagcga agagcgcgac ccgcaggtgc tcgtcgaccg tgtgcacgac ttctacgaag
     2521 atcatggctt cttcgacgcc gacgtgcgcg tcgaggagcg c
//
LOCUS       DATIML010000138         7798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5515168, whole genome shotgun sequence.
ACCESSION   DATIML010000138 DATIML010000000
VERSION     DATIML010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7798
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5515168"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..891
                     /locus_tag="VLJ38_02390"
     CDS             <1..891
                     /locus_tag="VLJ38_02390"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HSU38378.1"
                     /translation="ETGTWVVASEPTSFDLIDAHYVRDVEPGEMVIIDKSGLRSSRPF
                     IDVPRHTCIFEYVYFARPDSNLDGVSVYEARKNLGRSLAKEHPIDADLVIPVPDSGVP
                     ATIGYAEASGLPFELGLVRSHYVGRTFIEPQASIRHFGVRLKLNPVSAALQDKRIVVV
                     DDSIVRGTTSRKIVKMLRDAGAREVHMRISSPPTQWPCYYGIDTPTRGELIASSHSVE
                     EINQYITSDTLAYLSLDGMKEAVVKAHTDSGGRGPRRSLPIAAQPLTTKSFCTACWTG
                     EYPIAFVPHPRQKQMRLLDC"
     gene            951..1871
                     /locus_tag="VLJ38_02395"
     CDS             951..1871
                     /locus_tag="VLJ38_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HSU38379.1"
                     /translation="MLDQLPSEVSVYEVSPRDGLQNEARPVPLEGKVRLIEALVRAGL
                     KRIELTSFVSPRWVPQLADAEELIRTILPRSEGVTYSALVPNATGLERALRVGLPEIA
                     VFLSASETHNRKNTNKSIARSLETFAEVVPPARQAGLRVRAYISTVWGCPYEGDVPVE
                     RSLELAQALLELDCYQVSLGDTIGVGTPLQTRRLLERFLAEIPAPRLAMHCHDTRGTA
                     LVNCLVGLELGIRDFDSSVAGLGGCPYAPGAAGNLATEDLVYMLEGMGIRTGVDLELV
                     VEAGRVAERVVGRTLPGKVHQAGPPRVRAS"
     gene            complement(1868..3478)
                     /locus_tag="VLJ38_02400"
     CDS             complement(1868..3478)
                     /locus_tag="VLJ38_02400"
                     /inference="COORDINATES: protein motif:HMM:NF023048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal-binding motif-containing protein"
                     /protein_id="HSU38380.1"
                     /translation="MKAARLAWLLVAIVPACGRTQLSLPQTSEGSGQAGAPDLSDECA
                     ADSDCSSPDACQRAVCAKDGARFTCQTLPIGCDDGDVCTLDSCDPAAGGCVHERAVDA
                     DHDGFIGKAPDGVPATCGGIDCDDTDPNVHPGAAEACDGKDNDCNGNVDDGAAYTPLG
                     SPVLVAPTTSRADVGGFAFDGSTYGLTYGFANTHSWSYFETLDASGQIATGPVLVSEI
                     NADTFPGALDFSGKSYLTAWNDARQGGSYEIYLTRFDTTAQKLSPDVRVTNAPGFSLH
                     PSVHFTGSEYVVIWEDQRFVSEGQGSAIFAHRVSEKGELVGAELQLTASDEDADSVAF
                     DVSRGRLGVSYVVAGRRAPDGSEPPTTVRFRTFDLTLGAGTGPFDIGANGQAPTVQGT
                     DSGFVVAWHTGDEHGNWGGEIQAASLDDHGNVVAAGPVTSGDTYARDRALVSFGDRLL
                     LVWSATPSDSAHYQLFYELLDAQKLTVVSPRAFLASGISDPTYDLVGPLAVRGANGDV
                     GIVFNENLSFRSYFMRLGCGRVGGVGPR"
     gene            complement(3475..4092)
                     /locus_tag="VLJ38_02405"
     CDS             complement(3475..4092)
                     /locus_tag="VLJ38_02405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38381.1"
                     /translation="MWSGYRSFLSRLGGPGFLLVWIALVASACAGRSTMVSADDDATA
                     GSGASGGKPGHAGAATGGSMQVAGRGGSAGARSGSGGTGDVPYDDPGCPDAAAPASVI
                     ECNVFDGGSSCADGFACKPDVEHPFGTGCDEQTVNMRCVVAGSGRQGDSCEGGMGDCA
                     AGFICVLGAAHGARCLQMCPLDGSTRCPSGYVCGATDADGIGVCA"
     gene            4205..4912
                     /locus_tag="VLJ38_02410"
     CDS             4205..4912
                     /locus_tag="VLJ38_02410"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HSU38382.1"
                     /translation="MRLLWFALSLAAATCRRVEEPPPTPAPDSTSASPSLSAADGTSS
                     ETPADGTARLGGSAANGSGTGSAPADAAATEVGAPDAGRCLEPLVEPPPPVAEPASIC
                     PHDPDDATPELRHGKIKVPEAKGSPAIDVEIADTPASEQRGLMYRTKLGAERGMIFVW
                     PKESIRTFWMHNTCLPLDMLFVAKDGTVVGILEQVPTLNDRPRQVRCPAAYVLEVNAG
                     WSRRHGVKPGMKLELKL"
     gene            4935..5765
                     /locus_tag="VLJ38_02415"
     CDS             4935..5765
                     /locus_tag="VLJ38_02415"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSU38383.1"
                     /translation="MSNTSRLRIFACFAFTLTPIACQKTPAEPAPEPADTSTAMPKNA
                     TPTAAPTPTPTPTPTPTPTPTPPPAQSAAKPVASVTPSADDPLHGVFTLADATKGVSG
                     KGSLVADIKTDLGTLTCTLFDDKAPITVANFVGLARGLRPFKNPSGEWVKKPAYDGTT
                     FHRVIKGFMIQGGDPAGTGAGEPGYVIPDEIWEGATHDHRGELCMANRGKNTNGMQFF
                     ITDGGPRHLDGGYTIFGQCGPDELIDKLASVEVRGDHSVKPTKIEKVTIRRDSAKPKK
                     "
     gene            5849..6283
                     /locus_tag="VLJ38_02420"
     CDS             5849..6283
                     /locus_tag="VLJ38_02420"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: protein motif:HMM:TIGR03562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HSU38384.1"
                     /translation="MAIRTSTAQWEGDLKAGKGTMTVGKGAYTGAFSFATRFEDSPGT
                     NPEELIAAAHAGCFSMALSNGLAKEGFAPKRVNTKADVHFGPDPAGGFRVSKIELTTD
                     AEVPGIDKAKFDKIVDETRVGCPISKLLKGGAEIMVKANLKT"
     gene            complement(6324..7610)
                     /locus_tag="VLJ38_02425"
     CDS             complement(6324..7610)
                     /locus_tag="VLJ38_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38385.1"
                     /translation="MAGGIYLFCSFVYFVFADGSLTREHTPWNHFALQASAWLHGRLD
                     LGGPPPAYAGGNDFAEFEGKWFVPFPPLPAVLLVPAVALAGSAEAVADGRFFLFVAGL
                     APAALFLALEKLRERGRAERRERESVLGALLFAFGSVYFFSAEQGTVWFAAHVVGTSL
                     AALYLWLALEAERPLLAGAALGLAFAARAPLLFAAPLFVCELVRRSLPGDFAGPWTPA
                     LLFARLDRRRLATGLAWFALPVAVVFALTCALNAARFGDPFEVGYRYLRVAWQARIEK
                     WGLFSYHYLARNLGVALTSLPWLGPPGARGFRIDGHGLALWLTTPLYLWLIWPKNTRA
                     PQLALALTAAAVALPSLLYQNSGWVQFGYRFSNDFAVFLFALLFVGGRRFGRLFYAAA
                     TWAVVINAFGALTFGRDAGAPFYVIEGSQRVLYEPD"
BASE COUNT         1391 a         2762 c         2530 g         1115 t
ORIGIN      
        1 gaaacgggca cctgggtcgt cgcgagcgaa ccgacgagct tcgatttgat cgacgcgcac
       61 tacgtccgcg acgtcgagcc gggcgagatg gtgatcatcg acaagagcgg cctcaggagc
      121 tcgcggccct tcatcgacgt gccgcggcat acctgcatct tcgagtacgt ctacttcgcg
      181 cgcccggact cgaacctcga cggcgtgagc gtgtacgagg cgcgcaagaa cctcggacgc
      241 tccctcgcga aagagcaccc gatcgacgcc gacctcgtga tcccggtgcc ggactcgggc
      301 gtgccggcga cgatcggcta cgccgaggcg tccggccttc ccttcgagct cggtctcgtg
      361 cgcagccact acgtcggccg caccttcatc gagccgcaag cgagcattcg ccacttcggc
      421 gtgcggctca agttgaaccc cgtgagcgcc gcgctgcagg acaagcgcat cgtcgtggtc
      481 gacgacagca tcgtgcgcgg cacgaccagc cgcaaaatcg tgaagatgct gcgcgacgcc
      541 ggcgcgcgcg aggtgcacat gcgcatctcg agcccgccga cgcagtggcc ctgctactac
      601 ggcatcgaca cgccgacgcg cggcgagctc atcgcctcga gccactcggt cgaggagatc
      661 aaccagtaca tcacgagcga cacgctcgcc tacctctcgc tcgatggcat gaaggaagcc
      721 gtggtcaaag cccacaccga ttcgggcggc cgcggcccgc gccgctcgct gcccatcgcc
      781 gcgcagccgc tcacgaccaa gtcgttttgt acggcgtgct ggacaggcga atatccgatc
      841 gcgttcgtgc cgcacccgcg ccagaaacaa atgcgcctgc tcgactgtta gcgccgttcc
      901 cggtgcggaa gctcggctgc gagcggcctt tcggcgcgct agactgaggt gtgctcgacc
      961 aattgccttc ggaggtctcg gtctacgagg tctcgccgcg tgacggcctg cagaacgagg
     1021 ctcgccccgt cccgctcgag ggcaaagtgc gactcatcga ggcgctcgtg cgcgccgggc
     1081 tcaagcgcat cgagctcacg agcttcgttt cgccgcgctg ggtgccgcag ctcgccgacg
     1141 ccgaggagct gattcggacg attctgccgc gctccgaggg cgtgacgtac agcgcgctcg
     1201 tgccgaacgc cacgggcctc gagcgcgccc tccgcgtcgg tctgccggag atcgccgttt
     1261 ttctttccgc ttcggagacg cacaaccgga agaacacgaa caagagcatc gcgcgctcgc
     1321 tcgagacgtt cgcggaggtc gtgccgccgg cgcgccaggc gggcctgcgc gtgcgcgcgt
     1381 acatttcgac cgtgtggggc tgcccgtacg agggcgacgt gccggtcgag cgctccctcg
     1441 agctcgcgca agcgctactc gagctcgact gctatcaagt gtcgctcggc gataccatcg
     1501 gcgtcggcac cccgctccag acgcgccgcc tgctcgagcg ctttctcgcc gagatcccgg
     1561 cgccgcgctt ggcgatgcac tgccacgaca cgcgcggcac ggcgctcgtc aattgcctgg
     1621 tcgggctcga gctcgggatc cgtgacttcg actcatcggt cgctggtttg ggcggttgcc
     1681 cgtacgcgcc gggcgccgcg ggcaatctcg ccaccgaaga tctcgtgtac atgctggaag
     1741 gcatggggat ccgcaccggc gtcgacctcg agctcgtggt cgaggcaggg cgtgtcgccg
     1801 agcgcgtggt cggccggacg ttgccgggca aagtgcatca agccggaccg ccgcgagtgc
     1861 gcgcgagtta gcgcggtccg acgcccccaa cgcggccgca gccgagccgc atgaagtagc
     1921 tccggaacga caggttctcg ttgaacacga tgccaacgtc gccgttcgcg ccgcgcacag
     1981 cgagcggtcc gaccagatcg taggtggggt cggagatgcc gctggcgaga aacgcgcgcg
     2041 gcgacacgac cgtgagtttc tgggcgtcga ggagctcgta aaagagctgg tagtgagcgc
     2101 tgtcgctcgg cgtcgccgac cacacgagca gcagccggtc gccgaacgag acgagcgctc
     2161 ggtccctggc gtacgtgtcc ccggaagtga cggggcccgc cgccacgacg ttgccgtggt
     2221 catcgagcga cgcggcttgg atctccccgc cccaattgcc gtgctcgtcg cccgtgtgcc
     2281 acgccacgac gaagcccgag tccgtcccct gcaccgtcgg cgcctgcccg ttcgcgccga
     2341 tgtcgaaggg tcccgtgccg gcgccgagcg tcaaatcgaa ggtgcggaag cgaactgtcg
     2401 tcggcggttc actgccgtcc ggtgcccgtc gtccggccac gacgtaggag acgccgagcc
     2461 gcccccggct cacgtcgaag gcgacggaat ccgcatcctc gtcggacgcc gtgagctgga
     2521 gttcggcgcc gacgagctcg cccttttcac tcacgcgatg cgcgaagatg gcgctgccct
     2581 ggccctcgct gacgaaacgc tggtcctccc agatcacaac gtactcgctg cccgtgaagt
     2641 gcacggacgg atggagcgaa aagccgggcg cattggtgac gcgaacgtcc ggggagagtt
     2701 tctgcgccgt cgtatcgaag cgcgtcagat agatttcgta gctgccgcct tggcgcgcgt
     2761 cgttccacgc ggtcagataa ctcttacccg aaaagtcgag cgcccccggg aaggtgtcgg
     2821 cgttgatctc gctcacgagc acgggacccg tcgcgatctg cccgctcgcg tcgagcgtct
     2881 cgaagtagct ccaggaatgg gtgttggcga agccgtacgt gagtccgtac gtgctcccgt
     2941 cgaacgcgaa gccgccgacg tcggcacggc tcgtggtcgg cgccacgagc acgggcgacc
     3001 cgagcggcgt gtacgcggcg ccgtcgtcga cgttgccgtt gcagtcgttg tccttaccgt
     3061 cgcacgcctc ggccgctccc gggtggacgt tcggatcggt gtcgtcgcaa tcgataccgc
     3121 cgcaggtcgc gggcacgccg tccggcgcct tgccgatgaa gccgtcgtga tcggcgtcga
     3181 cagcgcgctc gtgcacacag ccgcccgccg ccggatcgca gctatcgagc gtgcaaacgt
     3241 cgccgtcatc acaaccgatt ggcagcgtct ggcacgtgaa gcgcgcgccg tccttcgcgc
     3301 acacggcgcg ctggcaggcg tccgggctcg agcagtcgct gtcggccgcg cactcgtccg
     3361 atagatcggg cgcgccagct tggccgctgc cctcgctcgt ttgcggcaga ctcagttggg
     3421 tgcgcccgca cgcgggcacg atggcgacca gcagccacgc caaacgggca gctttcaagc
     3481 gcagactccg ataccgtcgg cgtccgtggc gccgcagacg taacccgacg gacagcgcgt
     3541 cgagccgtcg agcgggcaca tctgcaagca acgcgccccg tgcgcggcac cgaggacgca
     3601 gatgaacccg gcggcgcagt cacccatccc accctcgcac gagtcacctt gccgcccgct
     3661 gcccgcgacg acgcagcgca tgttcacggt ctgctcgtca cagcccgtgc cgaacggatg
     3721 ctcgacgtcc ggcttacacg cgaagccgtc cgcacagctg ctgcccccgt cgaacacatt
     3781 gcactcgatg acgctcgcag gcgcggccgc gtcgggacac cccgggtcgt cgtaaggcac
     3841 gtcccccgta ccgcccgagc cgctccgggc accggcactt cctccgcgac ccgcgacctg
     3901 catggacccg cccgtcgcgg cgccggcgtg accgggctta ccgccactcg cgccgctacc
     3961 cgcggtcgcg tcgtcgtccg ccgacaccat ggtcgaacgt cccgcgcacg cggacgccac
     4021 gagcgcgatc cacaccagca gaaacccggg gccaccgagc cgcgaaagaa aagagcggta
     4081 ccccgaccac atggccaaac gttttagcgc aggcgcggcg cacggcaaac gcgaggcgcg
     4141 cacggggccg agctcgttcc tttcgagcgc ccatcatcct acgtggtggt agaaggggct
     4201 cggcatgcgc ctgctttggt ttgcattgtc cctcgctgcg gctacgtgcc ggcgcgtcga
     4261 ggagccgccg cccacaccgg ctccggatag tacgagcgcg tcgccaagcc tctccgccgc
     4321 cgacggcacc agcagtgaga cgcccgccga cggaacggcg cggctcgggg gctccgcggc
     4381 gaacggctcc gggacgggct ccgcgcccgc ggacgcagcg gcgactgaag tcggagcgcc
     4441 ggacgccgga cgctgcctcg aacccctcgt cgagccaccg ccacccgttg ccgagcccgc
     4501 gagcatctgc ccgcacgatc ccgacgatgc cacgcccgag ctccgtcacg gcaagatcaa
     4561 agtcccggag gcgaagggct cgccggctat cgacgtcgaa atcgccgaca cgcccgccag
     4621 cgagcagcgc gggctcatgt accgaaccaa gctcggcgcc gagcgcggca tgatcttcgt
     4681 ctggcccaag gaaagcatcc gcacgttctg gatgcacaac acgtgtcttc cgctcgacat
     4741 gttgttcgtg gccaaggacg gcacggtcgt gggcatcctc gaacaggtgc cgacgctcaa
     4801 cgaccgccca cgccaggtcc gctgcccggc cgcttacgtg ctcgaggtca acgccggttg
     4861 gtcgcgccgg cacggcgtca aaccgggaat gaaactcgaa ctcaagttgt agggctcgcg
     4921 cccgaggaat gcctatgagc aacacttcgc gtctccgaat tttcgcctgc ttcgccttta
     4981 ccctcacacc catcgcttgc cagaagacac cggcggaacc tgcgcccgag cccgccgaca
     5041 cgtcgaccgc gatgccgaag aatgcgacgc ccactgccgc gccaacgcca acgccgacgc
     5101 caaccccgac accaactccc acgccgactc cgccaccggc gcaaagcgcc gcgaagcccg
     5161 tcgcctccgt cacgccaagc gccgacgatc cgctccacgg cgtcttcacg ctcgctgacg
     5221 caacgaaagg cgtctccggc aaaggttcgc tcgtcgcgga catcaagacg gacctcggca
     5281 cgctcacgtg caccctcttc gacgacaagg cgcccatcac ggtcgcaaac ttcgtcggcc
     5341 tcgcacgcgg cctgcgcccc ttcaagaatc cgagcggcga atgggtgaag aagccggcct
     5401 atgacggcac cacgtttcat cgcgtgatca agggcttcat gatccaaggc ggtgatccgg
     5461 cgggcacggg cgctggcgag ccgggttatg tcatccccga cgaaatctgg gagggcgcca
     5521 cgcacgacca tcgcggcgag ctctgcatgg ccaatcgcgg caagaacacg aacggcatgc
     5581 agtttttcat tacggacggc ggcccgcgcc acctcgacgg cggctacacc atcttcggac
     5641 aatgcggccc cgacgagctc atcgacaagc tcgccagcgt cgaagtgcgc ggcgatcact
     5701 cggtgaagcc gaccaagatc gaaaaagtca cgatccggcg cgatagcgca aaacccaaaa
     5761 agtgagcgct gccgaatcga cgcgccgagg cgcgttggct cttgctcccg gcaggctcga
     5821 tcgctaagca cttcggctgg aggaaacgat ggcaattcgc acttcgactg cacaatggga
     5881 aggcgacctg aaggccggca aaggcacgat gacggtcggc aagggcgcgt acaccggcgc
     5941 cttcagcttc gcgacacggt tcgaagacag ccccggcacc aaccccgaag agctcatcgc
     6001 ggcggcccac gcgggctgct tctcgatggc actctccaac ggcctcgcga aggagggctt
     6061 cgccccgaag cgcgtcaaca ccaaggccga cgttcacttc ggtcccgatc cggccggcgg
     6121 tttccgcgtc tcgaagatcg agctcacgac cgatgccgag gtccccggca tcgacaaggc
     6181 caagttcgac aagatcgtcg acgagacgcg cgtcggctgt cccatcagca aactcttgaa
     6241 gggcggcgcc gagatcatgg tcaaggcgaa cctgaagacg tgattggtct gctcgactgg
     6301 gctcgctcga agcgcgggcg ggctcagtcg ggttcgtaga gcacgcgctg gctgccctcg
     6361 atgacgtaga acggcgcgcc ggcgtcacgt ccgaacgtga gcgcgccgaa agcattgatg
     6421 acgactgccc acgtcgccgc cgcgtagaat agacgaccga agcggcgtcc gccgacgaac
     6481 aagagggcga acaggaagac ggcgaagtcg ttcgagaagc ggtaaccgaa ctgcacccag
     6541 ccgctgtttt ggtaaagcag actcgggaga gcgacggcag cagccgtcag agcgagcgcg
     6601 agctgcggcg cgcgcgtatt tttaggccaa atcagccaca gatagagcgg cgtcgtcagc
     6661 cacagcgcta ggccgtgccc gtcgatgcga aagccgcgcg ctccaggcgg accgagccac
     6721 ggcaagctcg tgagcgccac gccgagattt cgcgcgaggt agtgatacga aaagagtccc
     6781 cacttctcga tgcgcgcttg ccaggcgaca cgcaggtagc ggtagccgac ctcgaaggga
     6841 tcgccgaagc gcgccgcgtt gagcgcgcac gtcagcgcga acacgacggc gacgggcagc
     6901 gcgaaccacg cgagccccgt cgctaaccgg cgtcgatcga gccgcgcgaa gagcagcgcg
     6961 ggcgtccacg gtcccgcgaa gtcgcccggc aacgaacggc gcacgagctc gcacacgaag
     7021 agcggcgccg caaacaggag cggcgcgcgc gccgcgaacg caagcccgag cgccgcgccg
     7081 gccagcagcg gccgctccgc ttcgagcgcg agccataggt agagcgcggc gaggctcgtg
     7141 ccgaccacgt gcgccgcgaa ccacaccgtg ccctgttccg cgctgaagaa gtacacgctg
     7201 ccgaacgcga acaggagcgc gccgagcacg ctttcccgtt ccctgcgctc ggcgcgcccg
     7261 cgttcgcgca acttttcgag cgcgagaaat agcgccgccg gagcgagccc cgcgacgaac
     7321 agaaagaagc gcccgtcggc gaccgcctcg gccgagcccg cgagcgccac ggcaggcacg
     7381 agcagcacgg caggcagcgg cgggaacggc acgaaccatt tgccctcgaa ttcagcgaaa
     7441 tcgttgccgc ccgcgtacgc cggcggcggt cccccgaggt cgagacgtcc gtggagccaa
     7501 gccgacgcct gcagcgcgaa gtggttccac ggcgtgtgct ccctggtgag cgacccgtcg
     7561 gcaaacacga aatagacgaa cgagcagaag aggtagatcc cgcccgccat cagcagccga
     7621 cgttttttcg gatcagcgcc gcgcggcatc gcgctggacg ctaacccaat tggcgcgccc
     7681 cgctgtagcc cccaggggag agattcgacg atttgccggg ataatcgggc aatctttgcg
     7741 aaagctcgca ctcggcgcta ggttgcgcgc cccgtcgtga ccaaagcttc attcatcg
//
LOCUS       DATIML010000139         3216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4937209, whole genome shotgun sequence.
ACCESSION   DATIML010000139 DATIML010000000
VERSION     DATIML010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4937209"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1472
                     /locus_tag="VLJ38_02430"
     CDS             <1..1472
                     /locus_tag="VLJ38_02430"
                     /inference="COORDINATES: protein motif:HMM:NF039312.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DAHL domain-containing protein"
                     /protein_id="HSU38386.1"
                     /translation="EAVLKARSGLLTQYDPVVGAVSELRRLERSLRRIPRFLPAKGTA
                     ALAARLDASSGALANKEGLIESFKTENSVVQTSLHYFPLLATSLVDRVHNDPAAPELT
                     ARLQALVSAVMLFEVSPEAAPRVVSASADVREHQTVAVKLGRGRDLDVALAHARIIVE
                     RKPAVDSLVQQILGVPTTKRAALVQESYSALHRAAVDAELARKQWLFALALAVVVLGL
                     TEVILGVRRSAQALEKVTLELYRANDALAVEHEKERQLGELRTRFVAMTSHEFRTPLT
                     AIVSSAELLQSFGGHWDAERRVEHLARIRLAAGTMQRMLEDVLVIGRAEAGVLRASPS
                     PIRLDEFCKRLVETLEHSSKQSHAIHYTFLGDPDVTLDERLLQHVLGNLLGNAIKYSA
                     PGSDVRFDVRTSGEECQFAVKDAGIGIPAADLPRLFMSFSRASNTEHVAGTGLGLAVV
                     KKALDVQHGSIRVESELGRGTAFFVTIPRRLTNIDTTLT"
     gene            1469..2914
                     /locus_tag="VLJ38_02435"
     CDS             1469..2914
                     /locus_tag="VLJ38_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU38387.1"
                     /translation="MKASILVVEDDALIRNNLVELLAEVGFDIASADNGADGVALAKA
                     RVPDLVICDIMLPKLDGYAVLRALRDDPATSSVPLIFLTAKGERAEVRLGMNLGADDY
                     VTKPFSIAEVLEAVATRLRRHDEVVARAREAAEREAGTAREATPPAYTPADGVVVLAP
                     SMRALYDQAARAAASAINVLILGENGVGKEILARAIHNLSPRVHGPFVALNCAALTES
                     LVQAELFGHEKGAFTGALQARAGLLESAAGGTLFLDEVGELPLSMQSKLLRALEERKI
                     LRVGARAEREIDVRFVAATNRDPELEIERGTFRQDLYFRLNGISLTIPPLRERRDEIP
                     HLARMFLARARAEQALPPLAIADAAVALLTQHAWPGNVRELKNAIERGSVLCHGDVLL
                     PEHLPPKILAGATPSFESQGAPSSLPLPPGPATPRPEASAAERQQILDALERCAGNQT
                     RAAEVLGISRRTLVSRLSEFDIPRPRKRSLT"
     gene            2929..>3216
                     /locus_tag="VLJ38_02440"
     CDS             2929..>3216
                     /locus_tag="VLJ38_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38388.1"
                     /translation="MEAELDKIPKFLGFGFSRPVVGSPAAHSVPEKCVDPQIVAGVDL
                     GSNSFHMIVARVDDGQLRIVDRMRERVRLAAGLDAAHRLSDEAMERALACLT"
BASE COUNT          521 a         1178 c         1024 g          493 t
ORIGIN      
        1 acgaagcggt cctcaaggcg cgctcgggac tgctcacgca atacgacccc gtggtcggtg
       61 ccgtcagcga gctccgccgg ctcgaacgct cgctgcgccg cataccgcgt tttctacccg
      121 cgaaaggcac ggccgccctc gcggcgcgac tggacgcctc gagcggcgcg ctcgcgaaca
      181 aggaggggct gatcgagtcg ttcaagacgg aaaactccgt ggtgcagacc tcgctccact
      241 atttcccgtt gcttgcgacc tcgctcgtcg atcgcgtgca caacgacccc gcggcgcccg
      301 agctcacggc ccggctgcaa gcgctcgtga gcgccgtgat gctgttcgaa gtgtcgcccg
      361 aagcggcgcc gcgcgtcgtg agcgccagcg cggacgtacg cgagcaccaa accgtcgcgg
      421 tgaagctcgg ccgcggccgc gatctcgacg tggcgctcgc gcacgcgcgc atcatcgtcg
      481 aacgtaagcc cgcggtggac tccctcgtgc agcaaatcct cggcgtgccc acgaccaagc
      541 gcgccgcgct cgtacaggag agctattcgg cgctgcatcg ggcggcggtc gacgccgagc
      601 tcgcacgtaa gcagtggctg ttcgcgctgg cgctcgccgt cgtcgtgctc ggcttgacgg
      661 aagtgatcct cggcgtgcgg cgctcggcgc aggcgctcga gaaagtgacg ctcgagcttt
      721 accgcgccaa cgacgcgctc gccgtcgagc acgaaaagga gcgccagctc ggagagctcc
      781 gcacgcggtt cgtcgcgatg acgtcgcacg agtttcgcac cccgctcacg gcgatcgttt
      841 cgtcggccga gctcctgcag tcgttcggcg ggcactggga cgccgagcgg cgcgtcgagc
      901 acctcgcgcg cattcgtctg gccgcaggca ccatgcagcg catgctcgaa gacgtgctcg
      961 tgatcggccg cgcggaagcg ggcgtgctcc gggcctcccc ttccccgatc cgcctcgacg
     1021 agttctgcaa gcgcctcgtc gaaacgctcg agcactcgag taagcagagc cacgccattc
     1081 actacacctt cctcggcgat ccggacgtga ccctcgacga gcgcctctta cagcacgtgc
     1141 tcggcaacct gctcggcaac gccatcaagt attccgcgcc cggctcggac gtgcgtttcg
     1201 acgtgcgcac gagcggcgaa gagtgtcagt tcgcggtcaa agacgcaggc atcggcatcc
     1261 ccgccgccga tttgcctagg cttttcatga gcttttcgcg ggccagcaac acggaacacg
     1321 tggccggcac ggggctcggc ctcgcggtcg tgaaaaaagc actagatgtg cagcatggca
     1381 gtatcagggt agaaagcgag ttgggtcgcg gtaccgcatt cttcgtcacc attccgcgcc
     1441 ggctcaccaa tatcgatacg accctgacat gaaggcttcg attctggtcg tcgaagacga
     1501 cgcgctaatt cgcaataacc tcgtcgagct gctcgccgaa gtcgggttcg acatagcgtc
     1561 ggccgacaac ggcgccgacg gcgtcgcgct cgccaaggcg cgcgtgcccg acctggtgat
     1621 ttgcgacatc atgctgccca agctggacgg ctacgccgtg ctgcgcgcgc tgcgcgacga
     1681 cccggccacg agcagcgtgc cgctgatctt tctcacggcc aagggcgaac gcgccgaggt
     1741 tcggctcggc atgaacctcg gcgccgacga ctacgtcacc aagcccttca gcatcgccga
     1801 ggtgctcgag gcggtcgcga cgcgcctgcg ccgccacgac gaagtcgtcg cccgcgcgcg
     1861 tgaggccgcc gagcgcgaag ccggcacggc gcgcgaagca acgccccccg cctacacgcc
     1921 ggccgacggc gtcgtcgtgc tcgcgcccag catgcgcgcg ctctacgacc aggccgcgcg
     1981 cgccgccgcg agcgcgatca acgtgctcat cctcggcgaa aacggcgtcg gcaaggagat
     2041 cctcgcgcgc gcgatccaca acctttcacc gcgagttcac ggcccgttcg tcgccttgaa
     2101 ctgcgccgcg ctcaccgaat cactcgtgca agccgagctc ttcggccacg aaaagggcgc
     2161 gttcacgggg gcgctgcagg cccgcgcagg cctgctcgaa agcgccgcgg gcggcacgct
     2221 cttcctcgac gaggtcggcg agttaccgct ctcgatgcag agcaaactgc tgcgcgcgct
     2281 cgaggagcgc aagatcctgc gcgtcggcgc gcgcgccgag cgtgaaatcg acgtgcgctt
     2341 cgtcgccgcg accaaccgtg atcccgagct cgaaatcgag cgcggcacgt tccgtcagga
     2401 tctctacttc cgcctgaacg gcatcagcct cacgatcccg ccgctccgcg agcgcaggga
     2461 cgaaatcccc catctggcgc ggatgttcct cgcgcgcgcg cgggccgaac aagcgttgcc
     2521 cccgctcgcc atcgcggatg ccgccgtcgc gctcctcacg cagcacgcct ggcccggcaa
     2581 cgtgcgcgag ctcaagaacg cgattgagcg cggctcggtg ctctgccacg gcgacgtgct
     2641 cttgccggaa catttgccgc cgaagatcct cgccggcgcc acgccgagct tcgagtcaca
     2701 gggggcgccg tcctcgctgc ctctgccgcc cggccccgca acgccgcgcc ccgaagcctc
     2761 cgccgccgaa cgccaacaga tcctcgacgc cctcgagcgc tgcgccggca atcagacgcg
     2821 cgccgcggag gtcctcggca tctcgcgccg cacgctcgtg agtcgcctga gcgagttcga
     2881 tatcccgcgc ccacgcaaac gctcgctcac ctgacgctcg ctacggcctt ggaggccgag
     2941 ctcgacaaga tcccgaaatt cttgggattt gggttttccc gcccggtggt cggaagcccc
     3001 gcggcacact ccgtcccgga gaagtgcgtg gaccctcaaa tcgtcgccgg cgtcgatctc
     3061 ggctccaata gcttccacat gatcgtcgcg cgcgtcgacg acgggcagct ccgcatcgtc
     3121 gatcgcatgc gcgagcgcgt ccggctcgcc gcgggcctcg acgccgcgca tcgcttgagt
     3181 gacgaggcga tggagcgcgc gctcgcctgc ctcacc
//
LOCUS       DATIML010000140         4387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1472227, whole genome shotgun sequence.
ACCESSION   DATIML010000140 DATIML010000000
VERSION     DATIML010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4387
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472227"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VLJ38_02445"
     CDS             <1..245
                     /locus_tag="VLJ38_02445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38389.1"
                     /translation="APTTTSDSAPTEKASDSATNTHLSEDVKAQLKDSDKSRAEKKKA
                     SKSSHGHTAARSKSSSGSSGVFRNGGNADDPLNSKL"
     gene            complement(294..992)
                     /locus_tag="VLJ38_02450"
     CDS             complement(294..992)
                     /locus_tag="VLJ38_02450"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HSU38390.1"
                     /translation="MSPASDRNPTLLPGVIACTLRGRRASDAIEIVTERDGAVGLVML
                     DVRAAREQEALRARLASSALVSLAEREPMHVLANSLRSIVCQAVAASVGVVALRVHPM
                     HGRVELLNAGMPPVACALPDGRLLQMPALSQDIGPRSQRAHPYELIPLAPGSVWFVAS
                     DGATSGSLDETNPLWGALGLPSSALELASESHEGLQRRLREQLGELPLPEDASLVVVP
                     TALPRRTESGIRES"
     gene            1239..2711
                     /locus_tag="VLJ38_02455"
     CDS             1239..2711
                     /locus_tag="VLJ38_02455"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU38391.1"
                     /translation="MPFTLDVTLQSPTQDPSLGIVPTAGDVVALVEDDATTRLLTRTW
                     LEAAGYKVKEYDSERAVREDTGPAPTAACIDLGLGEQSGLDVIRYLHERDPELPTIVV
                     TAEREVETAVAAMRAGAYDYLTKPVDRDRLLHSVRRACERRRLVDRVKNLQSELGTNP
                     LSGIVGASSAMVELSRQVERVIESDVAVCLLGESGTGKELVARAIHRGGPRRSGPFIA
                     INCAAIPASLQESELFGHERGAFTGAIQNRLGCFERARGGTLLLDEVGEMSPATQAVL
                     LRTLQERTVRRVGGSQEIPVDVRIVCATHRDLRSEVDAGRFREDLYFRLVVYPIRLPP
                     LRERCEDIPMLVVHFLEKLRTRSPHGVRGLSAEALDALARHSWPGNVRELENVIHRCV
                     LACRGDEIGLADLPPDLRATTVAAPDATPREGGGDLLGDDDEVVPLRELEQRAIRKAL
                     RLTRGSVGRAAKLLGIGRATLYRRLAELDLAPDTVGRIVA"
     gene            2708..3103
                     /locus_tag="VLJ38_02460"
     CDS             2708..3103
                     /locus_tag="VLJ38_02460"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSU38392.1"
                     /translation="MTETWGGESVPPSVPTLNRDRLHDIERNVSREFLIEIVALFLTE
                     VALRLERLSDAVKARESKRTTSLAHQLQGSAASLGVLRLRAVAQRLEELAEQDDWGAS
                     DETLARLIHEFQHVRQALATIGSDPLVQE"
     gene            complement(3129..>4387)
                     /locus_tag="VLJ38_02465"
     CDS             complement(3129..>4387)
                     /locus_tag="VLJ38_02465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38393.1"
                     /translation="FEKMLYDNAELARVYLEAFQVTGDLEYRRVAAETLDYVAREMQS
                     PAGGYFSATDADSEGVEGKYFVWTLDQVQSLLPREAAEYFAFFYDVTPEGNWEEHSIL
                     HRTRTLQAASNALGVAQDELARSLAESRAVLLAARAERVPPLLDDKVITSWNGLMLGA
                     MAEGFRVLRDRRYLASAERAATHALAKLVRPDGGLYRTLRDGRAHLDAYLEDYAFLSD
                     ALVTLYEAGGGERYLEHALSLAERLLADFSAPDGSFFATAAAHETLVARPRDGHDGAI
                     PAANAVAARVLARLGRHFDRTDLSERARAAIEAYGELVRRSPRAFATSLGVMDFLATG
                     PVELALIGEPGGPERDALEAALAQHYLPARIIAHAPARQAEPSAPPLLRDKELVGGRA
                     ALYVCRNYACAAPVTDPERVADALRG"
BASE COUNT          705 a         1485 c         1525 g          672 t
ORIGIN      
        1 ccgcgcccac gacgacgagc gacagtgctc cgaccgagaa agcgtcggac agcgcgacca
       61 acacgcatct ctccgaggac gtgaaagctc agctgaagga ttccgacaag tcgcgggccg
      121 agaagaagaa ggcgagcaag agcagccacg gccataccgc cgcgcgctcc aagagctcgt
      181 cgggttcgtc gggcgtcttc cgcaacggcg gcaacgccga cgatccgctc aactccaagc
      241 tctaatcagc gccgggctcg accgccggtc tcaccggcgg tcgccgactg ttctcaactt
      301 tcgcggatgc cggattcggt gcgccgcggc agggcggtcg gaacgacgac gaggctagcg
      361 tcctcgggca gcggcagctc gcccagctgc tcgcgcaagc ggcgctgtag cccttcatgg
      421 ctctcggatg caagctcgag cgcgctgctc ggcaggccga gggcgcccca gagcgggttg
      481 gtttcgtcga gcgagccgct cgtcgcgccg tccgacgcga cgaaccacac gctaccgggc
      541 gcgagcggga tgagctcgta cggatgggcg cgctgcgagc ggggcccgat gtcttgcgac
      601 aaggcgggca tctggagcaa ccggccgtcc ggaagtgcgc aggcgaccgg tggcatgccg
      661 gcgttcaaca gttcgactcg accgtgcatc gggtgaaccc ggagcgcgac cacgcctacg
      721 ctcgcggcga cggcttggca gacgatgctg cgcaagctgt tggccaacac gtgcatcggt
      781 tctctttcgg cgagcgacac gagcgcgctc gaagcgagtc gtgcacgcag ggcttcctgt
      841 tcccgcgccg ctcgcacgtc gagcatcacc aagcccacgg ctccgtcacg ttccgtaacg
      901 atctcaattg cgtcggatgc gcggcggccg cgcaaagtgc aggcgatcac gcctggcagc
      961 agggtcgggt ttcgatcgga agcggggctc atgctggacc ccttccgcaa gagacgttcc
     1021 atctcgcgtt tgcacgagcg gcacccgcaa gcgcgcggaa gctttcgctg cgcacttgcg
     1081 cctacccgtc gctcggcgat gtttcggttt cagatcgaga cccacgctcg tctcgcttcg
     1141 agaagaacga aacgcgtcct gaatgtaggt ggctgtggat tcggctgatt tgctgcgtca
     1201 acgcgttgtc gcgctgcccc taatccctgg cttgcttcgt gccgttcacc ctggacgtga
     1261 cgctgcaatc gccaacccaa gacccgagcc tcgggatcgt tccgacggcc ggggacgtcg
     1321 tcgcgctcgt cgaagacgat gcgaccacgc gcttgctgac gcgcacgtgg ctcgaagctg
     1381 ccggctacaa agtgaaggag tacgactccg aacgcgccgt gcgtgaagac acgggccccg
     1441 cgccgaccgc cgcgtgcatc gacctcgggc tcggcgagca gagcgggctc gacgtgatcc
     1501 gttacctgca cgagcgcgat ccggagctac cgaccatcgt cgtgacggcc gagcgcgaag
     1561 tcgagacggc ggtcgcggcg atgcgcgcgg gcgcctacga ctacctcacg aagccggtcg
     1621 accgcgatcg tctgctgcac tcggtgcggc gcgcctgcga gcgcaggcgc ttggtcgacc
     1681 gcgtgaaaaa cctgcaaagc gagctcggca cgaacccgct ctccggcatc gtcggggcga
     1741 gctccgcgat ggtcgagctt tcgcgtcagg tcgagcgcgt gatcgaaagt gacgtcgccg
     1801 tgtgtctgct cggcgaaagc ggcacgggca aggagctcgt ggcccgcgcc attcaccgcg
     1861 ggggtccgcg gcgttcggga ccgttcatcg ccatcaactg cgcggccatc ccggcgtcgc
     1921 tgcaggagtc cgagctcttc ggccacgaac gcggcgcctt cacgggcgcg attcagaacc
     1981 ggctcggctg tttcgaacgg gcgcgcggcg gcacgctcct gctcgacgaa gtcggcgaga
     2041 tgagcccggc gacgcaggcc gtgctgctcc gtacgctgca ggagcgcacg gtgcgccgcg
     2101 tgggcggcag ccaggagatc cccgtcgacg tgcggatcgt ttgcgcgacg catcgcgacc
     2161 tcaggagcga agtggacgcc ggccgtttcc gcgaagattt gtacttccgg ctcgtcgtgt
     2221 acccgattcg gctgccgccg ctccgcgagc gctgcgaaga cattccgatg ctcgtcgtgc
     2281 atttcctcga gaagctccgg acgcgatcgc cgcacggcgt gcgcggcctg tcagcggaag
     2341 cgctcgacgc gctcgcacgg cacagctggc cgggcaacgt gcgcgagctc gagaacgtga
     2401 tccatcgctg cgtgctcgcg tgtcgcggcg acgagattgg cctcgccgat ttgccgcccg
     2461 atttgcgagc gacgaccgtc gccgcgccgg acgctacacc gcgcgaaggc ggcggagatc
     2521 tgctcgggga cgacgacgag gtcgtgccgc tgcgcgagct cgagcaacgc gcgatccgca
     2581 aggcgctgcg gctcactcgc ggcagcgtcg gacgcgccgc caagctcctc ggcatcggac
     2641 gtgccacgct ttaccggcgc ctcgccgagc tcgatctagc gccggatacc gtcgggagaa
     2701 tcgtcgcatg accgagacct ggggtgggga gagcgtccct ccgagcgtcc cgacgctcaa
     2761 tcgggatcgc ttgcacgaca tcgagcgcaa tgtctcgcgc gaattcttga tcgagatcgt
     2821 cgctctgttt ctcaccgagg tggccttgcg tctcgagcgg ctatcggacg ccgtgaaggc
     2881 gcgcgaatcc aagcgcacca cgagcctcgc ccatcagctt caaggctcgg ccgcgagcct
     2941 cggcgtgctg cgcctgcgtg cggttgctca gcggctcgag gagctcgccg agcaggacga
     3001 ttggggcgcc tcggacgaga cgctcgcgcg cctgattcac gagtttcagc acgtgcggca
     3061 ggcgctcgcg acgatcggtt ccgacccgct cgtgcaggaa tgaagcgcga ggcgcggcga
     3121 gccgcgcgct agcctcgcag ggcgtccgca acgcgttcgg ggtccgtcac cggagccgcg
     3181 cacgcgtagt tgcggcagac gtaaagggcc gcccgcccgc ccacgagctc cttgtcgcgg
     3241 aggagcggcg gcgcgctcgg ctccgcctga cgcgccggcg cgtgggcgat gatgcgcgcg
     3301 ggcaggtagt gctgcgcgag ggcggcctcg agcgcgtcgc gctccggtcc gccgggttca
     3361 ccgatgagcg cgagctcgac gggccccgtc gcgagaaagt ccatcacgcc gagtgacgtc
     3421 gcgaaggcgc gcggcgaacg gcgcacgagc tcgccgtacg cttcgattgc cgcgcgggcg
     3481 cgctcgctca aatcggtgcg gtcgaaatgg cggccgagtc gtgcgagcac gcgcgccgcg
     3541 acggcattgg cggcgggaat cgcgccgtcg tgcccgtcac gcgggcgggc gacgagcgtc
     3601 tcgtgcgcgg cggcggtcgc gaagaagctg ccgtccggcg ccgaaaaatc ggcgagcaag
     3661 cgctcggcga gcgaaagtgc gtgctcgagg tagcgctcgc cgccgccggc ctcgtacagc
     3721 gtgacgagcg cgtcgctcaa aaacgcgtag tcctcgaggt acgcgtcgag gtgcgcgcga
     3781 ccgtcacgca gcgtgcgata caagccgccg tccgggcgca cgagctttgc gagcgcgtgc
     3841 gtcgcagcgc gttccgccga cgcgaggtag cgccgatcgc gcaggacgcg gaagccttcc
     3901 gccatggcgc cgagcatcaa gccgttccac gacgtgatca ccttgtcgtc gagcaagggc
     3961 ggcacccgtt cggcccgcgc ggcgagcagc acggcgcgtg attcggcgag cgaacgggcg
     4021 agctcgtcct gggcgacacc gagcgcgttc gacgctgcct ggagcgtgcg cgttcggtgc
     4081 aagatcgagt gctcttccca gttgccctcg ggcgtcacgt cgtagaagaa cgcgaaatat
     4141 tcggcggctt cacgcggcaa gagcgactgg acttggtcga gggtccagac gaaatatttg
     4201 ccttcgacgc cctcgctgtc ggcgtcggtc gccgaaaaat agcccccggc agggctttgc
     4261 atctcacgcg ccacgtagtc gagcgtctcc gccgccacgc gccgatattc gaggtcgccc
     4321 gtcacctgga aggcttcgag ataaacgcgc gcgagctccg cgttgtcgta cagcatcttc
     4381 tcgaagt
//
LOCUS       DATIML010000141        11960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2627500, whole genome shotgun sequence.
ACCESSION   DATIML010000141 DATIML010000000
VERSION     DATIML010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 11960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11960
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2627500"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2003)
                     /locus_tag="VLJ38_02470"
     CDS             complement(<1..2003)
                     /locus_tag="VLJ38_02470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HSU38394.1"
                     /translation="MNQSGAYNAPWRRFGPYLGERQWGTVREDYSEHGNAWDYFPHEH
                     ARSRAYRWGEDGLLGFCDHHQRICLGLALWNEADPILKERLFGLTNDQGNHGEDVKEL
                     YYYLDATPTASYAKALYKYPQRAFPYTALVERNRCPRSEPEVELMDLGVFDDDRYFDV
                     FVEYAKAEPNDILWRVHVVNRGPEPAPIQLLPHVWFRNTWAWTHGAERPRLERSGATS
                     ALLTHPEMGNFVMHFDGASELLFCENETNFPRIFGVQGPPFPKDAIGDYIVKNALSAT
                     NPDGRGTKCAGQYRVVLPPGGEVTIRARLSQKASRAATAPFHDFDAVFAARQSEADEF
                     YTQLQAGIEDADARLVHRQALAGMIWSKQFYNYDVRAWLHGDEAQPAPPAGRFQRNAD
                     WEHLVNDDVLSLPDKWEYPWYAAWDLGFHCLPMALIDPEYAKHQLILLMREWYMHPSG
                     QFPAYEWAFEDVNPPVHAWAALRVFQIDKKTRNDAGDLDFLERVFHKLMLNFTWWVNR
                     KDHEGRNVFQGGFLGLDNIGVFDRSKPLPTGGFINQADGTAWMAMYSLNLMRIALELA
                     VHDPVYEDIASKFFEHFLHIADAMTKIGPEAVGLWDEQDKFYYDVLSVGGRSVPLRVR
                     SMVGLIPLFAVEVLDERTFQKLPGFTQRLRWLLEHRPDLAALVS"
     gene            complement(2250..3146)
                     /locus_tag="VLJ38_02475"
     CDS             complement(2250..3146)
                     /locus_tag="VLJ38_02475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38395.1"
                     /translation="MSEQGPGGYGGGGYGGGQPPGGQGGWGPPPGQPPGGQPPGGQPP
                     GGPPPGGQPPGGQPPGGYGQPPGGYGQPPGGYGQPPGGYGQPPGGYGQPPGGYGQPPG
                     APQGWPQQPGHVAPTQPGGAPAPGKKTNPLLWLGLGCGALLLIGSAGAAWFYFSVFKP
                     AQEVERAVAAASGFGATVSVSDAGVVVNLPGIGQVTAPTAPTGAATTPSGAITPGATA
                     SASAAPTPTLVLPTPSSGLGTGGPSCDAAAACCKAMASKAGGQAQTVASCDALKASPE
                     FACAQALVTYKKMAPLVGVTCP"
     gene            3303..4850
                     /locus_tag="VLJ38_02480"
     CDS             3303..4850
                     /locus_tag="VLJ38_02480"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSU38396.1"
                     /translation="MPIRRATPTKLCAERRRHRAARWASACVALSLASAAQAEEPKAH
                     TNAATSTPASKASARLTTSKGATAELAPARPALTLPFEKLTLENGLTLILHRDPSLPL
                     VAVNIWYHVGPAYEPPGRSGFAHLFEHLMFEGSRHVGHEFDKLLESIGATNVNGTTNW
                     DRTNYFETVPREYLELVLWLESDRMGYLLDAITQERLDVQRDVVKNERRQTFENAPYG
                     KSALALLDTMFPAGHPYHGAVIGSMQDLSAATLDDVKDFFRQYYAPSNATLCLAGDFD
                     PALVKAMVEKYFGTLTGRPPTRVVRHATPPLAQAARLVIDEPVELARVAYGWIAPPAF
                     GPDDAPLDIATTILAGGRSTRLYRRLVVEDKLASDVDASSDPNQLATMVEVSATAASG
                     KAPEDVERALDSVIEGLKTNPPSAEELARAKRRTFLAIASDLEQLNGHNGESGRAGFL
                     QRFNHYLGDPGYLPKLLAAIDAVTADDVSRVVRQYMTPQARVTVVTRPSAGAANTTGA
                     AAGKGAP"
     gene            4847..6376
                     /locus_tag="VLJ38_02485"
     CDS             4847..6376
                     /locus_tag="VLJ38_02485"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSU38397.1"
                     /translation="MNALGAFARVALRARARVATCLALGALACSGNVKTYQAKPPAQP
                     APSSSVAPDPEPWRSERPKAGQPGELHFPEPNVVKLANGLSVYLVHRPTAVVTFDFVV
                     RHGASSVPEGKSGLAALTARLLVESTKKHPSRELAEAAENLGAPLSSSAGRDESTVSL
                     SALKSDAERALALLAEVVREPAFDPKEFERVRAEWVDQLVGERQAPDRLASLAGLRLL
                     NGPVLGAPVDGGVSDVKRLRVGDLKDFHARRYVPSESALIVVGDVGFEALKPGLDQSF
                     GSWRAQAQTQKAPAPALPAPNPGLKLVAIDRPGAVQTAIFAGQRFPPRASPGFEAREV
                     LGEVVGGLFTSRINMNLREKHAYTYGASARPIATRQWGAFVVGTSVRTDATAPALSEA
                     LHELQLARDPTLGAPLRPDEIARAKAGLLHALGARLEHGSLIAGSMVQLFSLDLGNDY
                     FSRYPGLVNAVSTSELEASQRLLDPEDLIVVVVGDLAQIRPGFDKLGWKLEPAAEALT
                     D"
     gene            complement(6484..7020)
                     /locus_tag="VLJ38_02490"
     CDS             complement(6484..7020)
                     /locus_tag="VLJ38_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38398.1"
                     /translation="MSDRPRQPSDEELEELSDDVIVAQESLIHVPQPRANVATDHPSV
                     VIAESVASPARPTVRTRRTTEQTVVIRDRRQLERARRAVPERQQRSPKTRGVEAKTLY
                     LLALAAVGSLLVGTLIAAFVDSRKEDRLRLTPTTARDSGPPAASNAAKPIDTVELDSL
                     PVDRSRRRTGTSSTSATR"
     gene            7115..9142
                     /locus_tag="VLJ38_02495"
     CDS             7115..9142
                     /locus_tag="VLJ38_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU38399.1"
                     /translation="MSVAPRLLVVDDDGVSRHLLGQMLASAGLAADVVETGADAVRFL
                     ENNPAPSAILLDLVMPEPDGYAILRYVRAEPRLAQVPVVVLTAVDTDGEIERAFASGA
                     DDYVQKPFRPGELLARLRVQLRVREYLDRLARRDRDQKTLLELTQALASSLDIRDILY
                     TVVKRIADVVRVDRCSVVLLAESGKVGFVLASSDDDRVRDRPILLDQYPEIREVVATG
                     RALVIQNAADSPLLEVVRQREPARGFASLALLPIMHGEGRPLGVLFLRSKAKTSFGDA
                     ELSLSSTLANATAIALRNARLLQSLRDETEQSTSARVEAEQRVQLFQRYAGFFESAAD
                     GMVVMDRHGHILFANPRAREIVGASEAELATATFDSLLVQSQRELAARLMRGFAAGVY
                     PRGVDLHLRERNDRSVTANVSFSSVLHEDDAILFTFRDVTLERQTAVELRQTKDFMES
                     VIESSVDAIVSADLDGTLRIFNRAAARIFGYSPRDVVGKMNVEDLYPPGVAREVMRRI
                     RDPDGSGYGRLEDYRVDMRAADGSTIPVLLSASLVVENGKRVGSLGIFTDLREKMRIQ
                     GELERAQEELRTREKQVMLAELAGAAAHELNQPLTSVIGYAELLARVLANDPAASRKA
                     QIIVSEAQRMAEIVRKVGGITKYETKSYVGEARILDLERASGVETPGEPGA"
     gene            9139..10401
                     /locus_tag="VLJ38_02500"
     CDS             9139..10401
                     /locus_tag="VLJ38_02500"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU38400.1"
                     /translation="MKEPLGTRPPTPVPPAPDGDARDLPSTPPSRRASDRAPAEPWRD
                     VLLTLALDLPLEAGPAEVVERFLDGASALLPHLALGACVITEPGERPFVSVRLPPGAS
                     DAMQRDPTRLFPILREERVLPLDDASTFHVAAQAALPPLDLQIAERAALVLTRSLARS
                     RGFRRATGSARNLERLQAHMIQAEKLASLGQIVAGVVHELNNPLTSIIAYAEYLTRKA
                     QGRLPQADAEDDIERLRRIQEAAGRILRFSRDLVAYARPSNEIPGPVSLADVVEKALV
                     FCEHEFVGIAVERELPVVLPAIRGVTGSLTQVFVNLFTNAAHAMAGGGRLSLRARVDL
                     AARAVLCEVHDSGRGIEPEHLPLVFEPFFTTKSEGRGTGLGLSIVRGILDALGGTIDV
                     ESAPGEGTRFTLTLPIAATGSIIPAERT"
     gene            complement(10354..10599)
                     /locus_tag="VLJ38_02505"
     CDS             complement(10354..10599)
                     /locus_tag="VLJ38_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38401.1"
                     /translation="MKLSDTTLMLFHDGELDAERARRVRAGRLVDASVGARLDALAEL
                     GDAVRAWALGAGTRRLESRRFCSRPLGRDDAPGRGDR"
     gene            complement(10596..11174)
                     /locus_tag="VLJ38_02510"
     CDS             complement(10596..11174)
                     /locus_tag="VLJ38_02510"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU38402.1"
                     /translation="MRAQRGDKPAFAELVARHQRRAFAIAFSLLRSEEDASEIVQEAF
                     LRVYRGLDTFNGSASFFTWLYRIVKNLSIDLMRRPAWQRELSDELCGEQVDALLFSRL
                     SGADPEDSLRRRELASVVGDAIDALPPYHRAVIVMREVEGMSYEEMAAAAGVSKGTIM
                     SRLFHARKKLQRALFGRYVEHTERLPLEADER"
     gene            complement(11385..>11960)
                     /locus_tag="VLJ38_02515"
     CDS             complement(11385..>11960)
                     /locus_tag="VLJ38_02515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSU38403.1"
                     /translation="GIISAKGRTNQDVRGLDESGYYDFLQTDASINPGNSGGPLLDIG
                     GRVIGINTAIRAQANSIGFAVPINMVKELLPRLLKDGKIRRSAIGVVVSGVQESDVAR
                     LHLPSETGALLRVVVPGGPADRAGLQADDVIVGFGSDAILTPERLRWVASLAGVGKKV
                     PIRVLRDGRAFDITLELQELPEEPGRQEEPE"
BASE COUNT         1916 a         4126 c         4025 g         1893 t
ORIGIN      
        1 gagacgagcg ccgccagatc cggccgatgc tcgagcagcc agcgcagccg ctgcgtgaag
       61 cccggcagtt tctgaaaggt ccgctcgtcg agcacctcga cggcaaagag cgggatcaag
      121 cccaccatcg agcgcacgcg cagcggcacc gagcggccgc ccacgctcag cacgtcgtaa
      181 tagaacttgt cctgttcgtc ccacaggccc accgcctcgg gcccgatctt cgtcatcgcg
      241 tcggcgatat gcaaaaaatg ctcgaagaac ttgctggcga tgtcctcgta caccgggtca
      301 tgcacggcga gctcgagcgc gatgcgcatc aagttcaagc tgtacatcgc catccacgcc
      361 gtgccgtcgg cttggttgat gaagccgccc gtcggcaagg gtttgctgcg atcgaacacg
      421 ccgatgttgt cgagtccgag aaacccgccc tgaaagacgt tgcgtccctc gtggtccttg
      481 cggttcaccc accaggtgaa gttcagcatc agcttgtgaa agacgcgttc gaggaaatcg
      541 agatcgcccg cgtcattgcg cgtctttttg tcgatctgaa agacgcgcag cgccgcccac
      601 gcgtggaccg gaggattcac gtcctcgaac gcccattcgt aggcaggaaa ctgcccgctc
      661 gggtgcatgt accactcgcg catcaagagg atcagctggt gcttggcgta ttcgggatcg
      721 atgagcgcca tcggcaggca gtgaaagccg agatcccacg ccgcgtacca agggtattcc
      781 cacttgtcgg ggagcgagag cacgtcgtcg ttcacgaggt gctcccaatc ggcgttccgc
      841 tgaaagcgcc ccgcgggcgg cgcaggctgc gcttcgtcgc cgtggagcca cgcgcgcacg
      901 tcgtagttgt aaaattgctt ggaccaaatc atgcccgcga gcgcttggcg gtgcacgaga
      961 cgcgcgtctg cgtcctcgat gcccgcctgg agctgcgtgt aaaattcgtc ggcctcgctc
     1021 tggcgcgcgg cgaagacggc gtcgaaatcg tggaacggcg cggtggcggc gcggctcgcc
     1081 ttttgcgaga ggcgcgcgcg gatcgtcacc tcaccgcccg gcggcaacac gacgcgatac
     1141 tgcccggcgc acttggtgcc acggccgtcg ggattcgtcg ccgacagcgc atttttcacg
     1201 atgtagtcgc cgatcgcgtc tttgggaaac ggcggacctt ggacgccgaa tatgcgcggg
     1261 aagttcgtct cgttctcgca gaacaagagc tcgctcgcgc cgtcgaagtg catgacgaag
     1321 ttgcccatct cggggtgcgt caagagggcg ctcgtcgccc cggagcgctc gagccgtggc
     1381 cgttcggccc cgtgcgtcca agcccaggtg ttgcgaaacc agacgtgggg caggagctgg
     1441 atcggcgccg gctcggggcc gcgattgacg acgtggacgc gccacaaaat atcgttcggc
     1501 tccgctttcg cgtactcgac gaagacgtcg aagtagcggt catcgtcgaa cacgccgaga
     1561 tccatgagct cgacctcggg ctcgctgcgc gggcagcggt tacgctcgac gagcgccgtg
     1621 tacggaaagg cgcgctgcgg atacttgtac agcgccttcg cgtaggacgc ggtcggcgtg
     1681 gcgtcgaggt agtagtagag ctccttcacg tcctcgccgt ggttgccctg gtcgttcgtg
     1741 aggccgaaca ggcgttcttt caggatgggg tcggcctcgt tccacagcgc gagcccgagg
     1801 cagatgcgct ggtggtgatc acagaagccg agcaggccat cttcacccca gcggtaagcg
     1861 cggctgcgcg cgtgctcgtg cggaaagtaa tcccaggcgt tgccgtgctc gctgtagtcc
     1921 tcgcgcacgg tgccccactg ccgctcgccg aggtacggcc cgaacctgcg ccagggagcg
     1981 ttgtacgcgc cgctttggtt caagcgcgcc gtttcagccg agcgcgcgag tccgatcgac
     2041 ggagacgagg gttcagctgg gaatggcaag ggttccctgg cgggattcaa gcgggttcac
     2101 aggaaggtgg aagggcagga agattgagcg gcttgaggcg agcagacctt ccgccttcct
     2161 gtttcatcct cgtcatcggt cgcttgctat cgatcggctc gagactcgag cgcgcgcgcc
     2221 cggaccgacc ggacggttgc gagaaaaacc tacggacaag tcacacccac caagggcgcc
     2281 attttcttgt aagtgacgag cgcttgcgcg caggcgaact cgggtgaggc tttgagcgcg
     2341 tcgcagctcg cgacggtttg cgcttggccg ccggctttgg aggccatcgc tttgcagcac
     2401 gcagctgcgg cgtcgcaact cgggccgccc gtgccgaggc cactgctcgg agtcggaagc
     2461 acgagtgtcg gcgtcggcgc tgcactcgcg ctcgccgtgg cgccaggcgt gatcgcgccg
     2521 gacggcgtcg tcgcggcgcc ggtcggcgcc gtgggcgccg tcacttgacc aatgcccggc
     2581 aagttcacga ccacgcccgc gtcgctcacg ctcaccgtgg cgccgaagcc gctagcggcg
     2641 gcgacggcgc gctcgacctc ttgcgccggc ttgaagacgg agaagtaaaa ccacgcggct
     2701 cccgcgctgc cgatcagaag caatgcgcca cagcccaagc cgagccagag cagcggattc
     2761 gtcttcttcc cgggtgcggg cgcgcccccg ggttgtgtgg gagcaacatg accaggctgt
     2821 tgcggccatc cctgcggagc accgggcggc tgtccgtaac caccgggcgg ctgtccgtaa
     2881 ccgccgggcg gctgtccgta accaccgggc ggctgtccgt aaccaccggg cggctgcccg
     2941 tacccgccgg gcggctgccc gtacccgccg ggcggctgcc caccgggcgg ctgcccacct
     3001 gggggcggcc caccgggcgg ctgtccaccc ggcggctgtc caccgggcgg ctgcccgggc
     3061 ggcggacccc aaccaccttg gccgcctggc ggctgtccgc cgccgtaccc gccgccgccg
     3121 tagccgcctg gtccctgctc agacatcgca aagcttgtta ccacaacttc caagttgagc
     3181 gctcttcggc aggaccagcg ctcgatcccg cgtgagcggt caattggcac gagaaaaact
     3241 cgcgaggcag gtccaagatc gccaaaagtc gaggcaagtc gtggcatcgt ccggccgtga
     3301 caatgccgat ccgccgagcc acgccgacga aactctgcgc cgagcggcgc cgtcaccgcg
     3361 cggcgcgttg ggcgtctgct tgtgtcgcgc tctcgctcgc atccgccgcg caggccgagg
     3421 agcccaaagc gcacacgaac gctgcgacca gcacgcccgc atccaaagcg agcgcgcgcc
     3481 tcaccacgag caaaggtgca acggccgagc ttgcgcccgc aaggcccgcg ctgacgctac
     3541 cgttcgagaa gctcacgctc gaaaacggac tcacgctgat tctgcatcgc gatccgtcgc
     3601 tgccgctcgt cgcggtcaac atctggtacc acgtcggacc cgcttacgaa ccgccgggca
     3661 gaagcggttt tgcccactta ttcgagcatt tgatgttcga gggctcgcgt cacgtcgggc
     3721 acgaattcga caagctgctc gagtcgatcg gcgcgaccaa cgtgaacggc acgaccaatt
     3781 gggatcgcac gaactacttc gagacggtgc cgcgcgagta cctcgagctc gtgctctggc
     3841 tcgagagtga tcgcatgggt tacttgctcg acgccatcac ccaagagcgt ctcgacgtgc
     3901 agcgcgacgt cgtgaagaac gagcgacgcc agacgttcga gaacgcgcca tacggcaaga
     3961 gcgcgctcgc gctcctcgac acgatgttcc ccgcggggca cccgtatcac ggcgccgtga
     4021 tcggctcgat gcaggatctg tcggcggcga cgctcgacga cgtgaaggat tttttccggc
     4081 aatactacgc gccgagcaac gcgacactct gcctcgcggg cgatttcgat ccagcgctcg
     4141 tcaaagcgat ggtcgagaag tatttcggta cgctgacggg ccggccgcca acgcgcgtcg
     4201 tgcggcatgc gacgccaccg ctcgcgcaag cggcgcggct cgtgatcgac gaaccggtcg
     4261 agctcgcgcg cgtcgcttac ggctggatcg caccgcctgc gttcggtccc gacgacgcgc
     4321 cgctcgacat cgcgaccacg attttggcgg gcgggcgctc gacgcgcctc tatcggcgac
     4381 tggtggtcga ggacaagctc gcctccgacg tcgacgcctc gtccgatccg aatcagctcg
     4441 cgacgatggt ggaggtgagc gcgacagcgg cgtcgggcaa agcgcccgag gacgtggaac
     4501 gcgcgctcga cagcgtgatc gaagggctca agacgaatcc gccgtcggcc gaggagctcg
     4561 cgcgcgccaa gcgccgcacg ttcctcgcca tcgcgagcga tctcgagcag ctgaacggcc
     4621 acaacggcga atcggggcgc gccggcttct tgcagcgctt caatcattac ctcggtgacc
     4681 ccgggtactt acccaagtta ctcgccgcca tcgacgcggt gacggcagac gacgtgtcgc
     4741 gcgtcgtccg ccagtacatg acgccgcagg cgcgcgtcac cgtcgtcacg cgcccgagcg
     4801 cgggcgccgc gaacacgacc ggcgccgccg ccggcaaggg ggcaccgtga acgcgctcgg
     4861 agctttcgcc cgcgtggcgc tgcgtgcccg cgcgagggtc gccacgtgct tggcgctcgg
     4921 cgcgctggcg tgttccggca acgtgaagac gtatcaagcg aagccgccgg cgcagcccgc
     4981 cccctcgtcc tcggtcgcgc ccgatcccga gccgtggcgc tcggaacggc cgaaggcggg
     5041 acagccgggg gagctgcatt tccccgagcc gaacgtcgtg aagctcgcga acggactcag
     5101 cgtttacctc gtgcatcggc cgacggcggt cgtgaccttc gacttcgtcg tgcgccacgg
     5161 cgcctcttcg gtgcccgaag gcaagagcgg gctcgcggcg ctcacggcgc gcctgctcgt
     5221 cgagagcacg aagaagcatc cgagccgcga gctcgcggaa gccgcagaga acctgggcgc
     5281 gcccttgagc tcgagcgccg gccgggacga atcgaccgtg agtctgtcgg cgctcaagag
     5341 cgacgccgag cgcgcgctcg cgctgctcgc cgaggtcgtg cgcgagccgg cgttcgatcc
     5401 gaaagagttc gagcgcgtgc gggcggaatg ggtcgaccaa ctcgtcggtg agcgccaagc
     5461 acccgaccgc ttggcgtcac tggcgggctt gcgcctcttg aacgggcccg tgctcggcgc
     5521 gcccgtcgac ggcggcgtct cggacgtgaa gcgcctgcgc gtcggcgatc tcaaagactt
     5581 tcacgcgcgc cgctacgtcc cgagcgagtc ggcgctcatc gtcgtcggcg acgtgggctt
     5641 cgaagcgctc aagcccgggc tcgatcaatc cttcggcagc tggcgcgccc aagctcaaac
     5701 gcaaaaggcg ccggcgcccg cgctgccggc gccgaacccc gggctcaagc tcgtggccat
     5761 cgatcggccc ggcgccgtgc aaaccgcgat cttcgcgggg cagcgcttcc cgccgcgcgc
     5821 gtcacccggc ttcgaagcgc gcgaggtgct cggggaagtc gtgggcggcc tcttcacgtc
     5881 gcgcatcaac atgaacctgc gcgaaaagca cgcctacacg tacggcgctt cggcgcgtcc
     5941 catcgcgacg cgtcagtggg gcgcgttcgt cgtcggcacg agcgtgcgca ccgacgcgac
     6001 ggcgcccgcc ctctccgaag ccctgcacga gctccaactc gcgcgtgatc cgacgctggg
     6061 cgctccgctg cgtccggacg agatcgcgcg cgccaaggcc ggccttttgc acgccctcgg
     6121 cgctcgcctc gaacacggtt cgctcatcgc gggctcgatg gtgcagctct tctcgctcga
     6181 cctcggcaac gactactttt cacgctaccc ggggctagtg aacgccgtct ccacgtccga
     6241 gctcgaggcg agccagcgcc tgctcgaccc cgaggacctg atcgtggtgg tcgtcggcga
     6301 tctcgcccaa atccgtcctg gcttcgacaa actcggctgg aagctcgaac ccgccgcgga
     6361 ggcgctcacc gactagcgtg aagctcgagt cgtacggcgg atcgaggcgc ccctcgccac
     6421 ttcgtccgca cgagcgccac aagcccacac gctaagcttg acgtcttcga ccatgaaacg
     6481 acgctagcgg gtagcagacg tcgagctcgt gccggtgcgg cgccgggaac gatcgaccgg
     6541 cagcgaatcg agttcgacgg tgtcgatggg tttcgcggcg ttcgaggccg ccggcggtcc
     6601 ggagtcgcgg gcggtggtcg gcgtcaggcg gaggcgatct tccttgcggg agtcgacgaa
     6661 cgcggcaatc agcgttccga cgagcagcga gccgacggcc gcgagtgcca ggaggtagag
     6721 cgtcttcgct tcgacgccgc gcgtctttgg gctccgctgc tggcgctcgg ggacggcccg
     6781 ccgcgcgcgc tcgagctggc ggcggtcgcg gatgacgacg gtctgctcgg tcgttctacg
     6841 cgtgcgcacg gtcgggcgag ccggcgacgc aacggattcc gcgatcacga cggagggatg
     6901 atcggtggcg acgttcgcgc gcggctgcgg aacatgaatg agagattctt gcgcgacgat
     6961 gacatcatcg gaaagctcct cgagctcctc gtcactgggc tgccgcggcc gatcgctcac
     7021 gaaacacacg ctaatacccg agggaggaac ggtcaaaacc gaagaccagc tccggcggct
     7081 cacggctaag agcgcctcgt gatacgcttt ttccgtgtct gtcgcgcccc gcctgctcgt
     7141 ggtcgatgac gatggcgtca gccggcacct gctgggccag atgctggcaa gcgccgggct
     7201 tgcggccgac gtcgtggaaa cgggggccga cgcggttcgc tttctcgaga acaatccggc
     7261 gccgtccgcc atcttgctcg acctcgtgat gcccgaaccg gacggctacg cgattctgcg
     7321 ctacgtccgc gccgaaccgc gcctcgcgca ggtgccggtc gtcgtgctca cggcggtgga
     7381 cacggacggc gaaatcgagc gcgcgttcgc gagcggcgcc gacgattacg tgcagaagcc
     7441 gtttcgtccc ggcgagctct tggcgcggct cagagtccag ctccgcgtgc gcgagtacct
     7501 cgaccggctc gcgcgccggg accgcgacca gaagacgctg ctcgagctca cgcaagcgct
     7561 cgcgtcgagc ctcgacattc gggacattct gtacacggtc gtcaagcgca tcgccgacgt
     7621 cgtacgcgtc gaccgctgca gcgtggtgct actcgccgag tccggcaagg tcggcttcgt
     7681 gctcgcgtcg agcgacgacg atcgcgtgcg ggaccggccg atcctactcg accagtaccc
     7741 ggagatccgc gaggtagtcg ccacggggcg cgcgctcgtg atccagaacg ccgccgacag
     7801 cccgctgctc gaggtggtac ggcagcgcga gcccgcgcgc gggttcgctt cgctcgccct
     7861 cctgccgatc atgcacggcg agggacgacc gctcggcgtg ttgttcttac gttcgaaggc
     7921 gaagacgagc ttcggcgacg ccgagctctc gctgtcttcg acgctcgcga acgcgacggc
     7981 gatcgcgctg cgcaatgcgc gcctgttgca gtcgctgcgt gacgagaccg agcagagcac
     8041 ctcggcgcgc gtcgaggccg agcagcgcgt gcagctgttc cagcgctatg ccggtttctt
     8101 cgagagcgcg gccgacggca tggtggtcat ggaccgccac ggccacatcc tgttcgccaa
     8161 cccgcgcgcg cgtgaaatcg tcggcgcgag cgaggcggag ctcgcgacgg cgacattcga
     8221 ctcactgctc gtgcagagcc agcgcgagct cgccgcgcgc ctgatgcgcg gcttcgccgc
     8281 cggcgtgtac ccgcgcggcg tcgatctgca tttgcgcgag cgcaacgatc gttccgtcac
     8341 ggccaacgtg agcttcagct cggtgctgca cgaggacgac gcgatcctgt tcacgttccg
     8401 cgacgtgacg ctcgagcgcc agacggccgt cgagctgcgg caaaccaagg atttcatgga
     8461 gtcggtgatc gagagctcgg tggacgccat cgtctcggcc gatctcgacg gcacgctccg
     8521 tatcttcaac cgcgcggcgg cacgcatctt cggctactcg ccgcgcgacg tcgtcggcaa
     8581 gatgaacgtc gaggatctct acccgccggg cgtcgcgcgc gaggtgatgc gcaggatccg
     8641 tgatccggac ggctcgggct acggcagact ggaggactac cgcgtcgaca tgcgcgcggc
     8701 cgacgggagc accatccccg tcttgctctc cgcctcgctc gtcgtcgaaa acggcaagcg
     8761 cgtcggctcg ctcgggatct tcacggattt gcgcgaaaag atgcggatcc agggcgagct
     8821 cgagcgcgcg caggaagagc tccgcacgcg cgaaaagcag gtgatgctcg ccgagctcgc
     8881 cggcgcggcc gcgcacgagc tcaatcagcc gctcacgagc gtgatcggtt acgcggagct
     8941 gctcgcgcgc gtgctcgcga acgatccggc cgcttcccgc aaggcgcaga tcatcgtgtc
     9001 cgaggcgcag cgcatggccg aaatcgtgcg caaggtcggc ggcatcacga aatacgagac
     9061 gaagagctac gtcggtgaag cccggatttt ggatctcgaa cgcgcgagcg gcgtcgagac
     9121 gccgggggag ccgggcgcat gaaggagccg ctcgggacgc gcccgcccac gccggtgccg
     9181 cccgcgcccg acggcgacgc ccgcgacctg ccgagcactc cgccctcccg tcgcgcgtcc
     9241 gaccgcgcgc ccgccgagcc ctggcgcgac gtcctcctga cgctcgccct cgatttaccg
     9301 ctcgaagccg gcccggccga agtcgtcgag cgcttcctcg acggcgcgtc ggcgctcttg
     9361 ccacatctcg cgctcggcgc ctgcgtcatc accgaaccgg gcgagcggcc gttcgtcagc
     9421 gtgcggctgc cgcccggcgc gtccgacgcg atgcagcgcg atccgacgcg cctgttcccg
     9481 attttgcgtg aggagcgcgt gctgcccctc gacgacgcct cgaccttcca cgttgcggcg
     9541 caggcggcgc tgccgccgct cgatttgcaa atcgccgagc gggcggcgct cgtgctcacg
     9601 cgctcgctcg cccgctcgcg gggttttcgc cgcgcgacgg gctcggcgcg aaacctagaa
     9661 cgcctgcagg cgcacatgat ccaggccgag aagctcgctt cgctcggaca gatcgtcgcg
     9721 ggcgtcgtgc acgagctcaa taaccccctc acctcgatca tcgcgtacgc cgagtacctc
     9781 acgcgcaagg cgcagggccg cttgccgcag gcggacgcgg aggacgacat cgaacgcctg
     9841 cgccggatcc aggaagcggc cgggcgcatc ttgcgcttct cgcgcgatct cgtggcctac
     9901 gcgcggccgt cgaacgagat cccggggccg gtctcgctcg ccgacgtggt cgaaaaggcg
     9961 ctcgtcttct gcgagcatga attcgtgggc atcgccgtcg agcgggagct gcccgtcgtg
    10021 ttgcccgcga ttcgcggcgt cacgggctcg ctcacgcagg tcttcgtgaa tttgttcacg
    10081 aacgccgcgc acgccatggc gggcggcggc aggctttcgt tgcgcgctcg cgtcgatctc
    10141 gcggcgcggg ccgtgctctg cgaggttcat gacagcggcc gcggcatcga gcccgaacac
    10201 ctgccgctcg tgttcgagcc tttcttcacg accaagagcg aaggacgcgg caccggcctc
    10261 gggctttcga tcgtgcgcgg catcctcgac gcgctcggcg gcacgatcga cgtcgagagc
    10321 gccccgggcg agggcacgag gttcacgctc acgctaccga tcgccgcgac cgggagcatc
    10381 atcccggccg agcggacgtg agcagaaccg ccgcgactcg agcctgcgcg tgccggcgcc
    10441 gagcgcccat gcgcgcacgg cgtcaccgag ctcggccagc gcgtcgagcc gagcgcccac
    10501 gctcgcgtcg acgagccgac ccgcgcgcac ccgtcgcgcg cgctccgcgt cgagctcgcc
    10561 gtcgtgaaag agcatgagcg tcgtgtcgga gagcttcacc gctcgtcggc ttccaacggc
    10621 aagcgctcgg tgtgctcgac gtagcgccca aaaagcgcgc gctgcagctt ctttcgcgcg
    10681 tgaaatagcc ggctcatgat cgtgcctttc gacacgccgg ccgccgcggc catctcctcg
    10741 tagctcatgc cctcgacctc gcgcatgaca atgaccgccc gatggtaagg gggcagtgcg
    10801 tcgatggcgt cgccgacgac gctcgcgagc tcgcgccggc gcaagctgtc ttcggggtcc
    10861 gcccccgaca ggcgtgagaa cagcagtgcg tccacctgct ccccgcagag ctcgtccgag
    10921 agctcgcgct gccaagcggg ccgccgcatg agatcgatcg acagattttt gacgatgcga
    10981 tagagccagg tgaaaaagct ggcgctgccg ttgaacgtgt cgagcccacg atagacgcgc
    11041 aggaaggcct cctgcacgat ttcggacgcg tcctcttcgc tccgcaagag gctgaacgcg
    11101 atggcgaacg cgcgacgctg gtgacgcgcg acgagctcgg cgaacgccgg cttgtcgccg
    11161 cgttgcgcgc gcacgatgag ctctcgatcg cgttcggatt cggcggcacg gtccgtccgg
    11221 ttggacgccg ggggcggccg agtattcacc ggtagctgcg cgacgggcgc gcaccactcg
    11281 ggacctagcg cgcggcgtcg cgccggcgcg cgacgcagag agagagccga agaacgggcc
    11341 atccgtattg aattacggag gcccccgtcc gtatctcccc ttgcctactc cggctcctct
    11401 tgtcgccctg gctcttccgg tagttcctgg agctcgagcg tgatgtcgaa ggcccggccg
    11461 tcgcgcagca cgcgaatcgg cacctttttg ccgacaccgg cgaggctcgc cacccagcgc
    11521 agccgctcgg gcgtgaggat cgcgtcgctg ccgaagccga cgatgacgtc atcggcttgc
    11581 agccccgcgc gatcggccgg tcctcccggg acgaccacgc gcaggagcgc acccgtttcc
    11641 gacggcaggt gtaggcgcgc gacgtcggat tcttgaacgc cggaaacgac gacgccgatc
    11701 gcgctccggc ggatcttgcc gtccttgagc aggcgcggca aaagctcctt caccatgttg
    11761 atcggcacgg cgaagccgat gctgttcgcc tgcgcgcgaa tcgcagtgtt gataccgatc
    11821 acgcgcccgc cgatatcgag cagcggaccg ccggagttgc ccggattgat gctcgcgtcg
    11881 gtctgtagaa aatcgtagta gcccgactcg tcgaggccgc gcacgtcttg gttcgtgcgg
    11941 cccttggcgg agatgatgcc
//
LOCUS       DATIML010000142         4209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1472789, whole genome shotgun sequence.
ACCESSION   DATIML010000142 DATIML010000000
VERSION     DATIML010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472789"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..788
                     /locus_tag="VLJ38_02520"
     CDS             <1..788
                     /locus_tag="VLJ38_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine dehydrogenase"
                     /protein_id="HSU38404.1"
                     /translation="DTAALARALDDATAAVVVGYPSFYGGIQDLRPIADAAHQKGALL
                     VASVSEPYALAVAEPPGALGADIAVGEGQPLACPPQLGGPGVGLFACHNDRAYLQQLP
                     GRVCGETVDHRGERGYVLTLSTREQHIRRERATSNICTNQGLLALALTIRTTLLGKAG
                     FVAVAERCLAKAVYLRDRILALPGYAPGFDAAPHFNEICVRVRGGSAARLCAALEAER
                     IVAGLDLGRIDARYGDRLLIAVTEKHRREDMDRFVTALERFTA"
     gene            complement(792..1355)
                     /locus_tag="VLJ38_02525"
     CDS             complement(792..1355)
                     /locus_tag="VLJ38_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38405.1"
                     /translation="MSRLPRFLRPAVILPAALLGLSLAWATPARADVSSWASAGAGIS
                     YINDGKEKHSAPSLQLEAGMGTPPSGFLVVGGLFHLETHFNLGTDLGLLARFATRGFA
                     LGDWGGAIDLGGYERFWGRGSAGGLGKLVLGAPWGIELDVGGGYGSNDARHFSVTLGI
                     DFARFSIFRTVGEKWFPNPYPAYRKPE"
     gene            complement(1387..2094)
                     /locus_tag="VLJ38_02530"
     CDS             complement(1387..2094)
                     /locus_tag="VLJ38_02530"
                     /inference="COORDINATES: protein motif:HMM:NF016915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38406.1"
                     /translation="MSVSFRHTAARLDALRREALAMARQATLLRHDLTVVAPASGSDV
                     AVLVHGFLATAGVLRPLGEALATAAEVTLTSFTHVPGISVTALAERVGEHVRALEAER
                     IYLVGHSIGGLAVRWFTGELGGDARVVQTVSLASPFWGVRRARLLPGTLAREIKPGSP
                     VLARLRAEIGSGVPHFAVSGSHDAVVGPPSRLGAADELVAAGCGHNAVLYDAGVLRAV
                     AERIRERRASAAALGRL"
     gene            complement(2096..>4209)
                     /locus_tag="VLJ38_02535"
     CDS             complement(2096..>4209)
                     /locus_tag="VLJ38_02535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38407.1"
                     /translation="MLTRRLENWLGQLGWGLLAGALGAAACGTKDEGPPVTGTGLDGG
                     GNRMNIAGRGGKGSGGGAGEGAGEGGMGDVSATGGTSGSSGTGGTGGTGGVNLLGAPI
                     VHVTSPAAVTDPNDRAVIVGDEIDVLCTATKSTDKGAKSVDQATVLLELLDGDGLVVE
                     THPGTPTDNADEYTAHFITRKVSTNGGMSVECQASDTSSPAIMGTDRIDTFVDHGPSS
                     LPVAPPVGDADNPPFATAVGQALHVAFKVAQAPVAKGDDGAAIGDVSLTVGGKSFDLT
                     KTNGQYTATVHLDDPKIFRPTPDGDQKIVITAGDQRSPSAAVNQIAYDFIVDGTGPDI
                     TIVSPHAGDVRSGKVQFVIKITDGGSGVDPLSVVATINNTDYAYSDSDPSWSYDQASG
                     TFTFYFDTTQIENSVAQATLQVVASDKVANTAKASVLLQLDNVPPIVELDPLPVREYK
                     HTAGNCSLAFDPVGPAAASDLQVVYDFQVFRALVWEETNHARGQSSGLAAGADLGSVV
                     LYLQPNVEQGLLKDTNGDHYCDALETKDADTGKDLHSISLKAISPQGSSWFGPASAED
                     ATLNAEFGMPAGCNYENAMTPPTPLCPPTNSSDMSRVISWDIDHTVPAIFGVEPLSGL
                     SCTGYGWEINSVVSEGWLCAAATAMDNNGNVGISVPIRLCYDDGKGPAPDCANSNSNP
                     PSCVEDGCILPPRLGSGLLEP"
BASE COUNT          678 a         1464 c         1399 g          668 t
ORIGIN      
        1 ccgacacggc cgcgctcgcg cgcgcgctcg acgacgccac ggcggctgtc gtcgtcggtt
       61 acccgagctt ttacggcggg atccaggatc ttcgccccat cgccgacgcg gcgcaccaaa
      121 agggcgcgtt gctcgtcgcg agcgtcagcg agccctacgc actcgctgtc gcggagccgc
      181 ccggcgcgct cggcgccgac atcgccgtgg gcgagggcca gccgctcgcg tgtccgcccc
      241 agctcggcgg tcccggcgtc ggcctctttg cctgccacaa cgaccgggcc tacctgcaac
      301 aactcccggg gcgcgtctgc ggcgaaaccg tcgatcaccg cggcgagcgc gggtacgtgc
      361 tcacgctctc gacccgcgag cagcacatcc gccgcgagcg cgcgacgagc aacatttgca
      421 ccaatcaggg cttgctcgcg ctcgcgctca ccatccgcac gaccttgctc ggcaaggccg
      481 gcttcgtcgc cgtcgccgag cgctgcctgg ccaaggccgt ctacttgcgc gaccgcatcc
      541 tcgcgctgcc gggctacgcg ccgggcttcg atgcggcgcc gcacttcaac gaaatctgcg
      601 tgcgcgttcg tggcggtagc gccgcacgcc tctgcgccgc gctcgaagcc gagcgcatcg
      661 tggccggcct cgatctcggc cgcatcgacg cgcgctacgg cgaccgcctg ctcatcgccg
      721 tcacggaaaa gcaccggcgc gaggacatgg accgcttcgt cacggcgctc gagcggttta
      781 cggcgtaacg ctcactccgg cttgcggtac gccgggtacg gattcgggaa ccacttttcg
      841 ccgacggtgc gaaaaatcga gaagcgcgcg aaatcgatgc cgagcgtcac gctgaagtgg
      901 cgcgcgtcgt tcgagccgta gccgccgccc acgtcgagct cgatgcccca cggggcgccg
      961 agcacgagct tgccgagacc gccggccgag ccgcggcccc agaagcgctc gtagccgccg
     1021 aggtcgatgg cgccgcccca gtcaccgagg gcgaagccgc gcgtcgcgaa acgggcgagc
     1081 aagccgaggt cagtgccgag attgaagtgg gtttcgaggt ggaagaggcc gccgacgacg
     1141 aggaaccccg acgggggcgt gcccatgccc gcttcgagct ggagcgacgg cgcggagtgc
     1201 ttttccttgc cgtcgttgat gtagctgatg ccggcgcccg cgctcgccca ggacgagacg
     1261 tcggcgcgcg cgggcgtggc ccacgcgagc gacaagccca atagcgcagc cggcaggatg
     1321 acggcagggc gcaggaagcg aggcaagcgc gacacggcgc gcgaagtaac acgggaccgc
     1381 ggcttttcaa agccgcccga gggccgcagc gctcgcgcgc cgttcgcgga tccgctcggc
     1441 gaccgcccgg agcacgcccg cgtcgtacag cacggcattg tgcccgcagc cggccgcgac
     1501 gagctcgtca gccgcgccga gccgactggg cggccccacg accgcatcgt ggctcccgct
     1561 gacggcaaag tgcggcacgc cgctgccgat ctcggcgcgt agccgcgcga gcaccggact
     1621 gcccggcttg atctcgcgcg ctagcgtgcc cggcaagagc cgcgctctcc gcacccccca
     1681 aaacggactc gcgagcgaca ccgtctgcac gacgcgcgca tcgccgccga gctcaccggt
     1741 gaaccagcgc acggcgagtc cgccgatgct gtggcccacg agatagattc gttcggcttc
     1801 gagcgcccgc acgtgctcgc cgactcgctc ggcaagcgcc gtcacgctga tgcccggcac
     1861 gtgcgtgaac gacgtgagcg tcacttccgc cgccgttgcg agcgcctccc cgagcggccg
     1921 caagacgccc gccgtcgcga ggaagccgtg cacgagcacg gcgacgtcgg acccgctcgc
     1981 cggtgcgacc acggtgagat cgtgacggag gagcgtcgct tggcgcgcca tggcgagggc
     2041 ttcgcggcgg agcgcgtcga ggcgcgcggc ggtgtgacga aacgagacgc tcaagtcacg
     2101 gctcgagcag tccggaaccg agcctgggcg gcaggatgca gccgtcctcg acgcacgacg
     2161 gcggattcga gttgctgttg gcgcagtcgg gagcggggcc tttgccgtca tcgtaacaga
     2221 gacgaatggg caccgagatt ccgacgttcc cgttgttgtc catcgccgtc gccgcggcgc
     2281 agagccagcc ttccgagacg acagagttta tttcccagcc ataacccgtg cagctcaagc
     2341 cggacagcgg ctcgacgccg aagatggcgg gtaccgtgtg atcgatgtcc caagaaatga
     2401 cccgactcat gtcggaggaa ttggtcggcg ggcacagcgg cgtcggcggc gtcattgcgt
     2461 tctcgtaatt gcaaccggcg ggcatgccga actcggcatt cagcgtggcg tcctcggcgc
     2521 tggccggacc gaaccacgag gagccttgtg gagagatggc cttcagcgaa atcgagtgca
     2581 agtccttgcc cgtatcggcg tccttcgtct cgagcgcgtc gcagtaatga tcgccgttcg
     2641 tatccttcag caatccctgt tcgacgttgg gttgcagata aaggacgacc gaccccaaat
     2701 ccgcgccggc agcgagcccg ctcgactggc cccgcgcatg attggtttct tcccaaacca
     2761 gcgcgcgaaa gacctgaaaa tcgtagacca cctgcaagtc gctcgcggca gcggggccga
     2821 ccggatcgaa ggcgagtgag cagttgccgg cagtgtgctt gtattcgcgg actggcagcg
     2881 ggtcgagctc gacgattggc ggcacgttgt cgagctggag caacacggac gccttcgccg
     2941 tgttggcaac cttgtccgaa gcaacgactt gcagcgtcgc ttgcgccacg gagttctcga
     3001 tctgtgtcgt gtcgaaataa aaggtgaatg tcccgctggc ttgatcgtac gaccacgacg
     3061 gatccgagtc gctataggcg tagtccgtgt tgttgatggt cgcgacgact gacaacggat
     3121 cgactccgga cccgccgtcg gtgatcttga tcacgaactg cacctttccg gagcgaacgt
     3181 cccctgcgtg tggagacacg atcgtgatgt ccggccccgt gccgtcgacg atgaagtcgt
     3241 aagcaatctg gttcacagcg gcggacgggc tgcgttggtc gccggccgta atgacgatct
     3301 tctgatcacc atccggagtc ggcctgaaga tcttcggatc gtccagatgg accgtcgccg
     3361 tgtactgccc gttggtcttc gtcaaatcga acgacttgcc acctaccgtg aggctcacgt
     3421 caccgatggc cgcaccgtcg tcacccttcg cgaccggcgc ttgcgcgacc ttgaaggcga
     3481 cgtgcaacgc ctgacccacg gccgtcgcga acggcggatt gtcggcatcg cccacgggcg
     3541 gggcgaccgg caaactagac ggcccgtgat ccacgaaggt gtcgatgcga tcggtgccca
     3601 tgatcgccgg cgacgacgta tcgctcgctt ggcactcgac gctcatgccg ccgttggtgc
     3661 tgactttgcg cgtgatgaag tgcgcggtgt attcgtcggc gttgtcggtg ggggtgcccg
     3721 ggtgcgtttc gacgacgagg ccgtcgccgt cgagcagctc gagcagcacc gtcgcttggt
     3781 cgacgctctt cgcgcccttg tccgtcgatt tggtcgcggt gcagagcacg tcgatttcgt
     3841 cgccgacgat caccgcgcga tcgttcggat ccgtgacggc cgcgggactc gtgacgtgca
     3901 cgatgggagc gcccagcagg ttgacgccgc cagtcccgcc agtcccgcca gtcccgctcg
     3961 atccgctggt tccgccggtt gccgagacgt cacccatgcc gccctccccc gcgccttcgc
     4021 ccgcaccgcc gccggagcct ttgccgccgc ggcccgcgat gttcatgcgg ttgccgccgc
     4081 cgtcgaggcc cgtgcccgta acgggcggtc cctcgtcttt ggtgccgcac gccgccgcgc
     4141 cgagagcgcc cgcgaggaga ccccacccca attgccccaa ccaattctct aagcgtcgcg
     4201 tcaacataa
//
LOCUS       DATIML010000143         2176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_607653, whole genome shotgun sequence.
ACCESSION   DATIML010000143 DATIML010000000
VERSION     DATIML010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607653"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1107
                     /locus_tag="VLJ38_02540"
     CDS             <1..1107
                     /locus_tag="VLJ38_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38408.1"
                     /translation="ALERAFERVTVALDLPAPLGDEGRGGSDALDLYLAPSDRTTPDY
                     ARVHVYPDTPRAGGFDRASGFCTALADPPELLERAATLCVGEALALALDAGETPDVRR
                     AFATELWWITGLPTSFDFEAVDRVQRRPREAIAARDLSPASEGHALFLEYLESKLGEG
                     GPADLSTALVAASAQTTPAESPSWRNEPDWFDVLRHTLAPGEAAMADLLGDFAVTRVF
                     LGEREDGRHLPALAWSGFFGAPHFDWVMPFSSLPRRVQLSPVEPTGAAFVWVDLKGAP
                     AGLTLGFRAEWEPPAEFQWELVQVGADGEQTRLRVPFQERETLAEARLVNVHDARAII
                     VVGTHLERVDTDHPFDPDVAPFEPHGASVYLVEL"
     gene            complement(1089..>2176)
                     /locus_tag="VLJ38_02545"
     CDS             complement(1089..>2176)
                     /locus_tag="VLJ38_02545"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSU38409.1"
                     /translation="PEQSIGPLLPRAQKEGTINVPASAPDLIAVGATVNRTSWPDFAH
                     ETVSIAGLGPPEAAPPDTLAYFSSAGPNALGALKPDLVAPGAYVVGAMAGGADPRTDG
                     TGGLFDDGGLCNSLGYVDGCFVVDDAHAVSGGTSMSAPLVTGAVALLFERDPTLHQAE
                     LKALLQAGARRLNVTDAQAEQLGAGALDLGRTLQALDEGMLERVPGRGSELLLAGSYA
                     HPDPSWPLEGLVELRDDAGEIADGFDAARLALFADGARLSEPLTRLAPGLWRFAIVAP
                     GGSGGRSLALSLRFDGREVASKSMPIAVERSLANTLPSARGGCALAPPETDGARRGGV
                     ATFTGIALLWFRRRRYASRVQRQSSTK"
BASE COUNT          312 a          815 c          724 g          325 t
ORIGIN      
        1 gcactcgaac gagcgttcga gcgcgtgacc gtcgcgctcg acttacccgc gcccctcggc
       61 gacgaaggcc gcggcggctc ggacgcgctc gatctctacc tcgcgccgag cgatcgcacg
      121 acgcccgact acgcgcgcgt ccacgtttac cccgacaccc ctcgagcggg cgggttcgat
      181 cgcgcttccg gcttctgcac ggcgctcgcc gatcctcccg agctcctcga acgcgccgcc
      241 acgctctgcg tcggcgaagc actcgccctc gcgctcgatg ccggcgagac gcccgacgtc
      301 cgccgcgcgt tcgcgaccga gctctggtgg atcacggggc ttccgacgag cttcgacttc
      361 gaagcggtcg accgcgtcca gcgacgtcca cgtgaagcca tcgccgcgcg cgacctctcg
      421 ccggcgagcg aaggccacgc gctctttttg gagtacctcg agagcaagct cggcgagggc
      481 ggcccagccg atttgtcgac ggcgctcgtg gccgcttccg cgcaaacgac gcccgccgag
      541 agtccctcgt ggcggaacga gcccgactgg ttcgacgtgc tccggcacac gcttgcgccg
      601 ggtgaagcgg ccatggccga tttgctcggc gacttcgcgg tgacgcgcgt ttttttggga
      661 gagcgcgaag atgggcgaca cctgccggcg cttgcttggt ctgggttttt tggcgcaccg
      721 cacttcgact gggtcatgcc gttctcgtcg ctgccgcgcc gcgtccagct ctcgcccgtc
      781 gagccgacgg gcgccgcgtt cgtgtgggtg gatctgaaag gcgcgcccgc gggactcacg
      841 ctcgggtttc gcgccgagtg ggagccgccc gccgagtttc aatgggagct cgtccaagtc
      901 ggcgcggacg gcgagcaaac gcgcttgcgc gttccatttc aagagcgcga gacgctcgcg
      961 gaggcgcggc tcgtcaacgt ccacgacgcg cgcgcgatca tcgtcgtcgg cacgcacctc
     1021 gagcgcgtcg ataccgatca cccgttcgat cccgacgtcg cgcctttcga accgcacggc
     1081 gcgtccgtct acttggtcga gctctgacgc tggacgcgcg acgcgtaccg tctccgcctg
     1141 aaccagagca gcgcgatccc ggtgaatgtc gcgaccccgc cgcgccgcgc gccgtccgtc
     1201 tcgggcggcg ccagcgcgca cccgccgcgc gccgacggca acgtattcgc gagcgaacgc
     1261 tcgacggcga tcggcatgct cttcgaggcc acctcgcggc cgtcgaaccg cagcgacagc
     1321 gcgagcgagc ggccgccgct cccacccggc gcgacgatcg caaaccgcca gagccccggc
     1381 gccaggcgag tcagcggctc gctcagcctc gcgccgtccg cgaagagcgc gagccgagcc
     1441 gcgtcgaacc catcggcgat ttcacccgcg tcgtcgcgca actcgacgag cccttcgagc
     1501 ggccagctcg gatccgggtg cgcgtacgag cccgcgagca agagctcgct gccacgtccc
     1561 ggcacccgct cgagcatgcc ttcgtcgagc gcttgcagcg tgcgcccgag atcgagcgcg
     1621 cccgcgccga gctgctccgc ttgcgcgtcc gtgacattga gccgccgcgc gcctgcttgc
     1681 aagagcgcct tgagctcggc ctgatgcagc gtcgggtcgc gttcgaacag cagcgcgacg
     1741 gctcccgtca cgagcggcgc ggacatcgac gtgccgccgc tgacggcgtg cgcgtcatcg
     1801 acgacgaaac agccgtcgac gtaaccgagc gaattgcaaa gtccgccgtc gtcgaagagt
     1861 ccgcccgtgc cgtccgtgcg tggatcggcg ccgcccgcca tggcgccgac gacgtacgct
     1921 ccgggcgcga ctaaatccgg cttgagcgca ccgagcgcgt tcggccccgc cgacgagaag
     1981 tacgcgagcg tgtcgggcgg cgcagcttcg ggtggcccga gcccggcgat cgacaccgtt
     2041 tcatgcgcaa aatccggcca agacgtgcga ttcaccgtcg ccccgaccgc gatcagatcc
     2101 ggcgccgacg cgggcacgtt gatggtcccc tccttctgcg cgcgcggcaa gagcggcccg
     2161 atgctttgct ctggac
//
LOCUS       DATIML010000144         3881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_895006, whole genome shotgun sequence.
ACCESSION   DATIML010000144 DATIML010000000
VERSION     DATIML010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3881
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895006"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1836)
                     /locus_tag="VLJ38_02550"
     CDS             complement(<1..1836)
                     /locus_tag="VLJ38_02550"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gldg family protein"
                     /protein_id="HSU38410.1"
                     /translation="MTTTAKTPVGVRPAVATPSAPGWVLGMYLGGLALVYTGEHVLSG
                     LEKGPAAVTAVGVLLVVLATGLRLSPRFRAGGDRRSIESLLAVLSGIGLFGLLLYFLT
                     TPWGVDHFLGKVAAAGRVRATELLTVLWIILILIATLPMIFAETAMRPMRTAERPESR
                     RVRSAAAAGLTLALAAVYGALFVYAASGVKVDVDFSYFKTSRPSDSTKKLAQSLTDPV
                     RVVAFFPQVNEVRTQVERYLNELKPATPKLQIEVQDRLLAPKLAKELRATQDGVVILS
                     RGGTTQTIVIGTELEASKAKLKVLDRDFQEQLTKLAKSRHNAYLTVGHGELNESKTSG
                     MDDPSARSGTILRTLLQRQNYNVKELGLAQGLGREVPDDADLVFVIGPTEPFSSSEIA
                     SLRRYLARHGKLFMALDADAFSTKDLVRAEAEKTAPAASTKPAGSANVVDLNAVPTGP
                     LQDLAGLVGLTYGTDVLANERMHVRLRNDDSDRTLLVTQSFSSHASVSTLSRAASRAG
                     VAFFGAGNLEKARASTERMDFAVRAPAGTFSDKNRNYQFDKDSEKQVTFNLAVAVNEG
                     DKKDAPKDQKPDDKNKKKNAPDEMRAFVLADSDALGDFVMAQDPYN"
     gene            complement(1833..2555)
                     /locus_tag="VLJ38_02555"
     CDS             complement(1833..2555)
                     /locus_tag="VLJ38_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU38411.1"
                     /translation="MNATLLIARREFYAYLRSPLGSALIAAVLLIDGLWFHFEGMSRP
                     LLSAEVLQQFFYGASGTTMIAGIVLSMRLLAEERQTGTFTLLNTSPVRNSEIVAGKFL
                     SAFAVIAVMTALSIYMPLLILVNGKVSWGHVAVGYLGLLLLGAAATAIGLFASALARS
                     QVIAAVIGAALLGVLVLMWLVARAVEPPLNEFFSALAIHHENFRPFQQGILELRRVAY
                     YVAVTYFFLLAATKTLEARRWR"
     gene            complement(2552..3514)
                     /locus_tag="VLJ38_02560"
     CDS             complement(2552..3514)
                     /locus_tag="VLJ38_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38412.1"
                     /translation="MIEIEELYKYYGERRAVGPLSARIEKGEIVGLLGLNGAGKTTTL
                     RVLACDLLPTSGTVRVGGYDVVERPHEVRGKVGYLPDRPPLYDDMSVDEYLSYAARLK
                     RVQTKDLARRVDEVLGMTELGDVRRQLVGTLSHGYRQRLGIAQAIVHRPDFVVLDEPI
                     GGLDPLQIVEMRGLVRGLRGEHTVVVSSHILHEISETCDRIFVIQHGEILWSGKEADL
                     SSEVEHGMRIRLTVRVAGASPEAALERARALVTGIAGVRNIESREPSESGDGIASLEV
                     MADSDARDALCRALVSGDVGVLEVSRLRDLETTFRALLEEGAPS"
     gene            3592..>3881
                     /locus_tag="VLJ38_02565"
     CDS             3592..>3881
                     /locus_tag="VLJ38_02565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38413.1"
                     /translation="MTSELENSGPPTQKFVAEQIAAAALELGFARVGFAPVTPFDEAA
                     TRLRSWLASGYHGELSYLENGDARADPRALLPEAKTLVAVALSYAEPPKTVAL"
BASE COUNT          665 a         1262 c         1312 g          642 t
ORIGIN      
        1 gttgtacgga tcctgcgcca tcacgaaatc gccgagcgcg tccgagtcgg cgagcacgaa
       61 ggcgcgcatc tcgtcggggg cgttcttctt tttgttctta tcgtcgggct tttgatcctt
      121 gggggcgtcc ttcttgtccc cttcgttcac cgcgacggcc agattgaagg tgacttgctt
      181 ctcgctgtcc ttgtcgaact ggtagttgcg attcttgtcg gagaaggtgc ccgcgggcgc
      241 gcgcacggcg aaatccatgc gctccgtcga agcgcgcgcc ttttcgaggt tgcctgcccc
      301 gaagaacgcg acgcccgcgc gcgacgccgc gcggctcagg gtggagacgg acgcgtgcga
      361 cgagaagctc tgcgtcacga gcagcgtgcg atccgagtcg tcgttgcgca ggcgcacgtg
      421 catgcgttcg ttggcgagca cgtccgtgcc gtacgtgagt ccgacgagtc cggcgagatc
      481 ctgcagcggg ccggtgggca cggcgttcag gtcgaccacg ttcgcgctgc ccgccggctt
      541 ggtggacgct gcgggggcgg tcttttcggc ctccgcacgc acgaggtcct tggtcgaaaa
      601 cgcgtcggcg tcgagcgcca tgaagagctt gccgtggcgc gcgaggtagc gcctgaggct
      661 cgcgatttca ctggacgaaa acggctcggt cggcccgatg acgaagacga gatcggcgtc
      721 gtcgggtacc tcgcgcccga ggccctgcgc tagaccgagc tctttcacgt tgtaattctg
      781 acgctggagc aacgtgcgca ggatggtgcc gctcctcgcg ctcgggtcgt ccatgcccga
      841 ggtcttcgac tcgttgagct cgccgtggcc gacggtgagg taggcgttgt gccgcgattt
      901 ggcgagcttc gtgagctgct cctgaaagtc ccggtcgagg accttgagct tggccttcga
      961 ggcttcgagc tcggtgccga tcacgatggt ctgcgtcgtc ccgccgcgcg aaaggatcac
     1021 gacgccgtcc tgggtcgctc ggagctcctt ggcgagcttc ggcgcgagca ggcgatcctg
     1081 cacctcgatc tggagcttcg gcgtcgcggg cttgagctcg ttcaggtagc gctcgacctg
     1141 cgtccgcacc tcgttcacct gcgggaagaa ggcgacgacg cgcaccggat cggtcaagct
     1201 ctgcgcgagt ttcttggtcg agtcactcgg ccgcgaagtc ttgaagtaag agaaatcgac
     1261 gtcgaccttc acgcccgacg ccgcgtagac gaagagcgct ccgtacacgg ccgcgagcgc
     1321 gagcgtgagc cctgccgcgg ctgcagatcg gacgcgacga ctctcgggcc gctcggcggt
     1381 acgcatcggc cgcatcgccg tctcggcgaa gatcatcggc agggtcgcaa tcaggatcag
     1441 gatgatccaa aggacggtga gtagctccgt cgctcggacg cgtccggctg ccgccacttt
     1501 gccgaggaag tggtcgacac cccagggagt cgtcaaaaag tagagcagta ggccgaacag
     1561 gccgatgccg gagagcacgg cgagcagcga ctcgatcgag cgccgatccc cgccggcccg
     1621 gaagcgcggg gacagccgaa gccccgtcgc gagcacgacc aagagcacgc cgacagccgt
     1681 gaccgcagcg ggtccctttt cgagaccgga gaggacgtgc tcgcccgtgt aaacgagcgc
     1741 gagcccaccg aggtacatcc cgagcaccca gcccggtgcg ctcggagtcg cgaccgcggg
     1801 ccgcactccc accggagttt tcgccgtggt ggtcaccgcc aacgcctcgc ttccagggtc
     1861 ttcgtcgctg cgagcaagaa gaagtaggtg acggccacgt agtacgcgac acgccggagc
     1921 tcgagaatcc cctgctgaaa aggccggaaa ttctcgtgat ggatcgcaag cgccgagaag
     1981 aactcgttga gcggcggctc gaccgcgcgc gcgacgagcc acatcaagac gagcacgccg
     2041 agcagagcgg ctccgatcac ggccgcgatc acctgagagc gggcgagcgc ggacgcgaac
     2101 aagccgattg cggtcgcggc agcgccgagc agcaagagcc cgaggtagcc gactgcgacg
     2161 tgcccccagc tcacctttcc gtttacgagg atgagcagcg gcatgtagat cgatagggcg
     2221 gtcatgaccg cgatcacggc gaaagccgaa agaaacttac cggcgacgat ctcgctgttg
     2281 cgcacgggcg aagtattgag gagcgtgaag gtaccggtct gccgttcctc ggcgagcagg
     2341 cgcatcgaaa gcacgatgcc ggcgatcatg gtcgtgccgc tcgcgccata gaaaaattgt
     2401 tgcagcacct cggcggaaag cagggggcgc gacatgccct cgaagtgaaa ccagaggccg
     2461 tcgatgagca gcaccgccgc gatgagagcg gacccgagcg gtgagcgcag gtacgcgtaa
     2521 aactcccggc gcgcgatgag gagggtggcg ttcacgacgg tgctccttcc tcgagcagcg
     2581 cgcggaaggt ggtttcgaga tcgcgcaggc gcgacacctc gagcacgccg acgtcgccgc
     2641 tgacgagtgc acggcagagt gcgtcgcgcg cgtcggagtc ggccatcact tcgagactgg
     2701 cgatgccgtc gccggactcg ctcggctcgc gcgactcgat gttgcgcacc cccgcgatgc
     2761 ccgtcacgag cgcgcgggcc cgctcgagcg cggcctcggg acttgcgccc gcgacgcgca
     2821 cggtgagccg gatgcgcatg ccgtgctcga cctccgacga gaggtcggct tccttgccgg
     2881 accacaggat ttcgccgtgt tgaatcacga agatgcgatc gcacgtttcg ctgatttcgt
     2941 gcaggatgtg gctcgaaacg acgacggtgt gctcgccgcg caagccgcgc accagcccgc
     3001 gcatctcgac gatctgcagc gggtcgaggc cgccaatcgg ctcgtcgagc acgacgaagt
     3061 ccggccggtg cacgatggcc tgcgcgatgc cgagccgctg gcggtagccg tgggagagcg
     3121 tgccgacgag ctgccttctc acgtcgccga gctcggtcat gccgagcacc tcgtccacgc
     3181 gccgcgcgag atccttcgtc tgtacgcgct tgagacgggc cgcgtaactc aagtattcgt
     3241 caacgctcat gtcgtcgtag agcggcggac gatccggcaa atagccgact ttgccgcgca
     3301 cctcgtgcgg ccgctcgacg acgtcgtagc cgccgacccg aacggtgccg ctcgtcggca
     3361 agaggtcgca cgcgagcacg cgcagggtcg tggtcttgcc ggcgccgttc agcccgagca
     3421 gccccacgat ttctcccttc tcgatgcgcg cggagagcgg accgacggct cggcgctccc
     3481 cgtagtactt atagagctcc tcaatctcaa tcacggtggg ctccgcccgt taccacagtc
     3541 cttgggcgcc tggaccagtg aaggagatgg agtattccca cgctgcggct catgacgagc
     3601 gaactcgaga attccggccc gccgacccag aaattcgtcg ccgagcagat cgcagccgcc
     3661 gccctcgagc tcggctttgc gcgcgtcggt tttgcacccg tcacgccatt cgacgaggcg
     3721 gcgacacggc tccggagttg gctggcgagc ggctatcacg gcgagctttc gtacctggaa
     3781 aacggtgacg ctcgggccga tccgcgagcg ctcttgccgg aggcgaagac actcgtcgcc
     3841 gtcgcgctct cttatgccga gccgccgaaa accgtggccc t
//
LOCUS       DATIML010000145         2117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1184841, whole genome shotgun sequence.
ACCESSION   DATIML010000145 DATIML010000000
VERSION     DATIML010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1184841"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(267..1460)
                     /locus_tag="VLJ38_02570"
     CDS             complement(267..1460)
                     /locus_tag="VLJ38_02570"
                     /inference="COORDINATES: protein motif:HMM:NF021523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2252 family protein"
                     /protein_id="HSU38414.1"
                     /translation="MPPLSPEALAARQLELDRERTRRFPSLLSRKQGRMSASPFAFLR
                     GAAPLFYEILAQVPELADGPAGEGWLAGDLHLENFGAYSPARSAGVDKRAAAFNLNDF
                     DEAVRGPWRVDLLRLLTSLILAGRELGVSGPIALGLGARLLESYVATVFQGTPLPVPP
                     SSVATLVERVASRPRRALLDARTVVSGGKRRFVRGERYLDLPPDTLAALPGALETYVL
                     DVAPEERPRLDQMAIIDAAHRVAGTGSLGVLRVAVLTLGKGAPDGHWIFDLKEQSDPS
                     ATSLAGATELSPAERVVTAFRACVAPPPRLLGTSRLEASELLGRRLTPQEDKLDLRQL
                     KPETLGPLALYLGALVGTAHSRGASAKPTVAWSPAEQREVLRSAARMASLHEAIYLEW
                     CFLLQ"
     gene            1598..>2117
                     /locus_tag="VLJ38_02575"
     CDS             1598..>2117
                     /locus_tag="VLJ38_02575"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSU38415.1"
                     /translation="MALASCALGCSDSKGSAHGDREPVAKRPPNIVVILADDLGFGDF
                     AAYGARFGTTPPAPTPHLDALAAEGLMFTQAHSSNGVCTPSRYGLLTGKYNWRTFNDI
                     SWGYAAPDIPSNDTTLAEFLKTQGYDTAAFGKWHLGGFFYDRAGVPYTARSNEITDPT
                     LIDWEHPLVGHAT"
BASE COUNT          380 a          707 c          718 g          312 t
ORIGIN      
        1 gaaccgcgcg ccgctgcgtc ttctctgcag accggcccga atgggcccgt agcaaggagc
       61 tatcgatatg gaaaacacca agaagacggc gtgctcgtgc gaaaaggcca gctgcgaatg
      121 tgcccgcgcc aagaacgagc gctgcacgtg cggggagcag tgcaattgcc aggcggcatg
      181 ccgttgcagc acgggctgcg gctgcaaggc ggcgcgctga acccagctga gctcgggtgg
      241 gccctccctg gggctcaccc gagcactcac tgcaaaagga agcaccactc gaggtaaatg
      301 gcctcgtgca gcgacgccat gcgcgcagca gagcgcaaga cctcgcgctg ttcggccggc
      361 gaccacgcga ccgtcggctt tgcagaggcg ccgcgggagt gagcggtccc gacgagcgca
      421 ccgaggtaga gcgcgagcgg gcccagcgtc tcgggtttga gttgacgtag atcgagcttg
      481 tcctcctgcg gtgtgaggcg gcgccccaag agctcgctcg cctcgagacg gctcgtcccg
      541 agcaggcgcg gaggcggagc aacgcaggcg cggaacgccg tcacaacgcg ttcggcgggg
      601 gacagctcgg tggcgcccgc aaggctcgtg gcgctcggat cggattgctc cttgagatcg
      661 aaaatccaat gaccgtcagg cgcgcccttg ccgagcgtga ggaccgcgac gcggagcaca
      721 ccgagcgagc cggtgccggc cacgcggtgc gctgcgtcga tgatggccat ttggtcgagg
      781 cgcggacgtt cctcgggagc tacgtccagc acgtaggttt cgagcgcccc gggcaacgcg
      841 gccagcgtgt cgggcggcaa gtccaagtag cgctcaccgc gcacgaaacg gcgctttccg
      901 ccgctcacca cggtgcgcgc atcgagcagc gctcgccgcg ggcgcgaagc gacgcgctcg
      961 acgagtgtcg caaccgaact cggagggacg ggcagtggtg tgccttgaaa caccgtcgcc
     1021 acgtaacttt ccagcaagcg tgcgccgaga ccaagcgcga taggcccgct cacaccgagc
     1081 tcacgtcccg cgaggatcag actcgtgagc aagcgcagga gatcaacgcg ccacggcccg
     1141 cgcacggctt cgtcgaaatc gttcaggttg aaggccgccg cgcgtttgtc gacgcctgcc
     1201 gaccgcgccg ggctgtacgc cccaaaattt tcgagatgca ggtcgccggc gagccagccc
     1261 tcgcctgcgg gcccgtccgc gagctcgggc acctgcgcga gaatttcata gaagagcggc
     1321 gcggcaccac gcagaaaggc gaacggtgac gcgctcatgc ggccctgctt gcgcgaaagc
     1381 aggctcggaa agcggcgcgt gcgctcgcga tcgagctcga gttggcgcgc cgccagcgct
     1441 tcgggactca aaggtggcat gagggttcac gcaggttact cgcatacggg ccggactacc
     1501 cagtgacgag cattcgattg ggcacgccgg cacggcgatt gtctgctagg gttctggcgt
     1561 gcgcggtgtg ccgggagtgg tgtggagtgt cgccctcgtg gcgctagctt cgtgcgcgct
     1621 cggctgcagt gactcgaagg gcagcgccca cggcgacagg gagccggtcg caaagcgtcc
     1681 gcccaacatc gtggtcattc tcgccgacga tttgggcttc ggcgattttg ccgcttacgg
     1741 cgcgcgattc ggcacgacgc cgcccgcccc cacaccgcac ctcgacgcgc tcgcggccga
     1801 aggcttgatg ttcacgcagg cgcactcctc gaacggcgtc tgcacgccga gtcgctacgg
     1861 gctcctcacc ggcaaataca actggcgcac gttcaacgac atcagctggg gttacgcggc
     1921 tcccgacatt ccgagtaacg acacgacgct cgccgaattt ttgaagaccc agggctacga
     1981 caccgcggca ttcggcaaat ggcacctcgg cggcttcttc tacgaccgcg caggcgtgcc
     2041 ctacaccgcc cgctccaacg agatcaccga tcccacgctg atcgattggg agcacccgct
     2101 cgtcggtcac gccacgg
//
LOCUS       DATIML010000146         4966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5517229, whole genome shotgun sequence.
ACCESSION   DATIML010000146 DATIML010000000
VERSION     DATIML010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4966
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5517229"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VLJ38_02580"
     CDS             <1..364
                     /locus_tag="VLJ38_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR00268 family protein"
                     /protein_id="HSU38416.1"
                     /translation="VRDAARLLGIAAWDKPAAACLSSRIPYGTSVTPERLARIGGFEA
                     ELKALGFRQVRVRFHDEIARIEIALDELGRLLEPGVRDRALEAGKRHGFRYVTLDLGG
                     YRQGSHNEVLAGRSLRLV"
     gene            496..2202
                     /locus_tag="VLJ38_02585"
     CDS             496..2202
                     /locus_tag="VLJ38_02585"
                     /inference="COORDINATES: protein motif:HMM:NF021235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HSU38417.1"
                     /translation="MRRADYAGSASCAPCHAAEYDAWQHSPMRRMTRSLAQTEVHAPF
                     DGSSFAFKGDRARLERHDGERFLRLETSDGERLFRVSKVIGGRYREDFVGARVSADDP
                     LGRTLDEERVLPLSWLITREEPRYKGYSVMVPERAHLEAGVVWRQGCIFCHNTTSGLS
                     ILYDDLYGAKAPSYQGSASNELPPAKAFHYAITDAERLRGALVGELAAMGSPTPLPAE
                     AHDALGVAADVTLEHFTEAHLVELGIGCEACHGGAREHVENPRAVRPSFALKSNFLAV
                     TTPQGQTPTRAEDINRTCAKCHTVLFSRYPFTWEGHTRKHEPGGSSTNSGEARDFLLG
                     ACSHELTCTRCHDPHTEDAPTALARFAEPAANGVCTSCHTRYATSGAASAHSHHASDN
                     AGNACVACHMPKKNMGLDYELVRYHRIGSPTDRERFEGDRPLECALCHADRSVDQIVS
                     TMERWWNKRYDRAALNRLYGADWRKNPLILTLLAGKPHERAVAANVLAHAGRRDQVTA
                     IAGILDDEYPLVRYFAKAALERLTGAPLPVDMNASGAETRAAAERWLSERASGAVTRA
                     AP"
     gene            complement(2260..4005)
                     /locus_tag="VLJ38_02590"
     CDS             complement(2260..4005)
                     /locus_tag="VLJ38_02590"
                     /inference="COORDINATES: protein motif:HMM:NF014116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate binding domain-containing protein"
                     /protein_id="HSU38418.1"
                     /translation="MMIGRLGVFSSVVLAASLGAVLNGCGSDDDTTGTSGGHSGKGGG
                     AGRGGASGRGGSVATGGTGGSLAGGTGGTGTTTGGSGGVAIGGGAGTGATSGGSSLGG
                     MAGTVAIAGGGGTGGAPSYCYEALYAPIAMENDQVDFEVDYSDASPVNLSATTLSVRL
                     RAETLGNAGGIQVYVKNGTAQQFAAAYLGWNNLTDLSDFTTLTYDLSTATGGAGFDIS
                     AIRYVGINVNAGATFDGANFQPATIYVDSITFSDGASANLNFNDGVKVLAVNQYNTPV
                     AGSTVSAGVCQVENGTGGMGGMSATGGVGGLSATGGLSGTEGGAAGEGGALGGEGGVD
                     QGAGGTGTGGSITGGTSGASTGGSSGAGGSSGAGGSSGSSGTAGTSSGGMSGAGSGGT
                     AGNSSGGLSGTGGSSSGAGGGSGAAGRAGAGGNGGGSANLISNGNFELGVTTGWSSWS
                     AGTFQVSPTAHGGNYSMLVTGRSGSNPNILTNITSVVSAGHSYTVTGWVRTSAATTGH
                     FTVQFDCATANDEFVWVENAVNVGNNGWTQITGTFDYTTSRCTGDTVSAVNLYLEGMA
                     AGVDVYVDDVSMTQN"
     gene            complement(4241..>4966)
                     /locus_tag="VLJ38_02595"
     CDS             complement(4241..>4966)
                     /locus_tag="VLJ38_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HSU38419.1"
                     /translation="TAIQMDIKIAGLDRSTLERALEQAREARVHILGRMMATLSTVRT
                     EINRWAPRITTIKVKPDQIRIIIGPGGKTIKGIVDQTGCSVDVEDDGTVAIASSDSAA
                     VQRALQIIEGLVAEPEVGRIYRGKITRLVDFGAFVEILPNSEALLHVSEIAHTRVESP
                     GDVLKEGEEVEVKVISVERDGKVRLSRRELMPFPEGEEGEAAKERMARAREAGPGGGR
                     GPRPGGGGRDRDRGPRRDRGPRH"
BASE COUNT          780 a         1785 c         1571 g          830 t
ORIGIN      
        1 cgtgcgcgat gccgcgcgcc tgctcggcat cgccgcgtgg gacaagcccg cggcggcgtg
       61 tctttcgagt cgtattccct acggcacgag cgtcacgccc gagcggctcg cgcgcatcgg
      121 cggcttcgag gcggagctca aggcgctcgg cttccggcag gtgcgcgtgc gcttccacga
      181 cgagatcgca cgcatcgaaa tcgcgctcga cgagctcgga cgcttgctcg agccgggcgt
      241 ccgcgatcgc gcgctcgaag cgggcaagcg ccacggcttt cgctacgtga cgctcgatct
      301 cggcggctac cggcaaggct cgcacaacga agtgctcgcg gggcggtcgc tacgcttggt
      361 gtgagcgtgg gcgcgctcgt tcgcgctcgc tcgttttggt tcgcgtgtgc ggccgcgttg
      421 acggcgtgcg gcggccctgg cgcaccagtg agtcccggcg accccggttc gacgctccgg
      481 gagcctcaca gcaacgtgcg tcgcgccgac tacgcgggct cggcaagttg cgcgccctgt
      541 cacgccgcgg agtacgacgc ctggcaacac tcgccgatgc ggcgcatgac gcgctcgctc
      601 gcccagaccg aagtccatgc gcccttcgac ggcagcagct tcgcattcaa aggcgaccga
      661 gcccggctcg aacggcacga cggagagcgt tttttacgcc tggaaacgtc ggatggcgaa
      721 cgactcttcc gcgtgagcaa ggtcatcggc ggacgctatc gcgaagactt cgtgggagct
      781 cgcgtcagcg ccgacgatcc gttaggtcgc acgctcgacg aggaacgcgt gttgccgctc
      841 tcctggctca tcacgcgcga agaaccccgt tacaagggtt actcggtgat ggtgccagag
      901 cgtgctcacc tcgaagccgg cgtcgtctgg cgccaggggt gtatcttttg tcacaacacg
      961 acctcggggc tgtcgattct ctacgacgat ctctacggag cgaaagctcc gagctaccag
     1021 ggttcggcga gtaacgaact gccgccggca aaggcgtttc actacgcgat caccgacgcc
     1081 gagcggctcc gcggagcgct cgtcggcgag cttgcggcca tgggctcacc gacgccgctc
     1141 cccgccgagg cgcacgacgc cctcggcgtc gcagcagacg tgacgctcga acatttcaca
     1201 gaggcgcatc tcgtcgagct cggtatcggc tgcgaggcgt gtcacggcgg cgcgcgggaa
     1261 cacgtcgaga accctcgtgc cgtgcgcccg agcttcgcgc taaagagcaa ttttctcgcc
     1321 gttacgacgc cgcaaggcca aacaccgacg cgcgccgaag acatcaatcg cacctgcgcc
     1381 aagtgccaca ccgtgctctt ctcgcgctac ccgttcacct gggagggcca cactcggaag
     1441 cacgagcccg gcggcagcag caccaactcc ggcgaagcac gcgattttct gctcggcgct
     1501 tgtagtcacg agctcacttg cacgcgctgc cacgaccctc acaccgaaga cgcgcccacc
     1561 gcgctcgctc gcttcgccga acccgccgcc aacggggtct gcacgagctg ccacacgcgt
     1621 tacgcgacaa gcggcgccgc cagcgcgcac agccaccacg ccagtgataa cgcgggcaac
     1681 gcgtgcgtcg cgtgccacat gccaaaaaag aacatggggc tcgactacga gctcgtgcgc
     1741 taccaccgca tcggctcgcc caccgatcgc gagcgcttcg agggcgatcg tcccctcgaa
     1801 tgcgcgctct gtcacgccga ccgcagcgtc gaccagatcg tgtccacgat ggaacgctgg
     1861 tggaacaagc gctacgatcg cgcggcgctc aatcgcttgt atggcgcgga ttggcgcaaa
     1921 aatccgctga tcctgacgct gctcgccggt aagccgcacg aacgcgccgt cgcagcgaac
     1981 gtgctcgccc acgcgggccg gcgggaccaa gtgacggcca tcgccggcat tctggacgac
     2041 gagtatccgc tcgttcgtta cttcgccaag gcggcgctcg agcggctcac gggcgcgccg
     2101 ctgccggtcg atatgaacgc gagcggcgcc gaaacgcgcg cggctgccga acggtggctc
     2161 tccgaacgtg cgagcggcgc cgtgactcga gcggcgccgt gactcgacgg acggcgtcgt
     2221 gacggctccg cgcagagccg tcacgcgccg ccaggcgcgt cagttctgcg tcatcgagac
     2281 gtcatcgacg tacacgtcga cgcccgccgc catgccctcg agatacaggt tgacggcgct
     2341 gacggtgtca cccgtgcaac ggctagtggt gtagtcgaaa gtgcccgtaa tctgcgtcca
     2401 gccgttgttg ccgacgttca ctgcgttttc gacccaaacg aactcgtcgt tggcggtggc
     2461 gcagtcgaat tgcaccgtaa agtgcccggt cgtggccgcg ctcgtgcgca cccagcccgt
     2521 caccgtgtag ctgtggcctg ccgacacgac cgaagtgatg ttcgtcagga tgttcgggtt
     2581 gctaccgctc cgtcccgtca cgagcatgct gtagttgccg ccgtgagcgg tcggtgacac
     2641 ctgaaacgtg cccgcgctcc acgacgacca acccgtcgtg acgccgagct cgaagttgcc
     2701 gttcgagatc aggttcgcgg agccgccgcc gttgccgccc gcgccggcgc gacccgcagc
     2761 accgctccca ccgccggcac cgctactgct gccgccggtt ccgctcaggc cgccgctgct
     2821 attgccagcc gtgccgccgc taccggctcc gctcatgccg ccactgctgg ttccggctgt
     2881 gccactcgat ccgctcgagc cgccagcacc gctcgaaccg ccagcgccgc tcgacccgcc
     2941 tgtgctcgcg ccgctcgtgc caccggtgat gctgccgccc gttccagttc cgccggcgcc
     3001 ttggtcgact ccaccttcgc cgcccaacgc gccaccttcg ccggccgcac cgccctcggt
     3061 gccgctcagg cctcctgtcg cggagagccc gcccacgccg cccgtggccg acatgccgcc
     3121 catgcccccg gtgccgttct cgacttggca gacgccggcg ctcaccgtcg agcccgcgac
     3181 gggggtattg tattgattga cggcgagcac tttcactccg tcgttgaagt tcagattggc
     3241 gctcgcgccg tcggagaacg tgatcgagtc gacataaatg gtcgcgggct gaaagttcgc
     3301 cccatcgaac gtggcgcccg cgttcacgtt gatgccgacg taacgaatcg cactgatatc
     3361 gaagcccgcg ccgcccgtgg ccgtcgagag atcgtaagtg agcgtcgtga agtccgagag
     3421 atcggtcagg ttgttccagc cgagatacgc cgccgcgaat tgttgggcgg tgccgttctt
     3481 gacgtagact tggatgccgc cggcgttgcc gagcgtctcg gcgcgcaagc gcacggagag
     3541 cgtcgtcgcc gacaggttga ccggcgaggc gtcgctgtaa tcgacttcga agtctacctg
     3601 atcgttttcc atcgcgatcg gcgcgtacag cgcctcgtag cagtaggaag gcgcgccgcc
     3661 cgtgccgccg ccgcccgcga tcgcgaccgt gccggccatt ccgccgagtg aactgccgcc
     3721 gctcgttgcg cccgtaccgg cgccgccgcc aatcgccact ccgccgctgc ccccggtcgt
     3781 ggtccctgtc ccgcccgtcc cgcctgcgag cgagccgccc gtgccgccgg tcgcgacgga
     3841 gccgcctctg ccgctcgctc cgcccctgcc cgcgccgccg ccttttcccg aatgtccgcc
     3901 gctcgtgccg gtcgtgtcgt catcgctgcc gcagccgttc aggaccgcac cgagcgacgc
     3961 cgccagcacc acgctcgaga acacgcctag tcgtccgatc atcatcctcg ctacctcgtg
     4021 tttttgggtc cgggggcacc ggagccgaga cgagactagg agacgcctta tcgatagaca
     4081 acgcctgttc gatggcgccg aggtaggcaa atgagcgcgt agatgcgaaa gcgccgtgat
     4141 caacctcgcg ttttgacgcg agatcaacca cggcgctcac gctcgtgtgc gtgcacgtca
     4201 cacgtccacg cactcgcggc aagattgccg cgctagcgtg tcagtgacgc ggaccgcgat
     4261 cgcggcgcgg accacgatca cgatcacggc cgccaccacc cgggcgcgga ccacgaccac
     4321 cgcccggacc cgcttcacgc gcgcgcgcca tgcgctcctt ggcggcttcg ccttcttccc
     4381 cttcggggaa cggcatgagc tcgcggcgcg agagccgcac cttgccgtcg cgttcgacgc
     4441 tgatcacctt cacctcgacc tcttcgccct ctttgagcac gtcgccgggc gattccacac
     4501 gcgtgtgtgc gatctccgaa acgtgcaaga gagcctccga gttcggcagg atctcgacga
     4561 acgcgccgaa atcgacgagc cgcgtgatct tgccacggta aatgcgaccg acctcgggct
     4621 ccgcgacgag cccttcgatg atctgcaggg cgcgctgcac cgccgccgag tcggagctcg
     4681 cgatcgcgac cgtaccgtcg tcctcgacgt cgacgctgca gcccgtctga tcgacgatgc
     4741 ctttgatggt cttgccgccg ggtccaatga tgatgcggat ctgatcgggc ttgaccttga
     4801 tcgtcgtgat gcgcggcgcc caacggttga tctccgtgcg caccgtggac agggtcgcca
     4861 tcatgcgacc gaggatgtgc acgcgtgctt cgcgtgcttg ctcgagagcg cgctcgagcg
     4921 tcgagcgatc gaggccggcg atcttgatgt ccatctgaat ggccgt
//
LOCUS       DATIML010000147         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_608751, whole genome shotgun sequence.
ACCESSION   DATIML010000147 DATIML010000000
VERSION     DATIML010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_608751"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2152)
                     /locus_tag="VLJ38_02600"
     CDS             complement(<1..>2152)
                     /locus_tag="VLJ38_02600"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SNF2-related protein"
                     /protein_id="HSU38420.1"
                     /translation="LDGSSNPAEQPLAFVPCLHLHTERMWVSSGEGSFDEGREDLVPV
                     ISLWFDYGGTKVRAADRRTRFFVAEGGGLGVVGRDLAGEARAQCLLESFGAIELDCSE
                     HVSAGPDPDADYLVQFDGDVHTYCSFGACALPQLRALGWVVTVDPSYPYQVVESDTPW
                     YAAVEPDAERTDWFGLELGIEIEGKRVNLLPALLEMLETRGDSESLESLLDVTTRLRA
                     VPVGDNRYLTIPPARLRFLLKVLLELYRGDTLEDGTLRFPRTGAASVAKLDQALGDSA
                     RLLWSGMTQAIERARGFGEKTSSPSAAPAVPRGLCATLRPYQEEGVAWLAGLVENDAG
                     GVLADDMGLGKTLQTITHVLREKQSGRASGPVLIVMPTSLVGNWRREFQKFAPELQVM
                     PFHGPKRDSRGLARADVILTSYPLLVRDLETLKSHAYHLVILDEAQAIKNPRSLAARA
                     ARELTARHRLCLSGTPIENNLEELWSLFDFVMPGFLGDAESFRTQFRVPIERMGNQLR
                     LEALRSAVTPFVLRRMKESVARDLPPKTEIVRPVDLGGDQRELYESIRVAAHGDVRRA
                     IREKGVQGATIAILDALMKLRQVCCDPRLVSVPSARRVKESAKFELFFELLATQLGQG
                     RRVLVFSQFTRMLDLLARGLDERRIAFVELTGATQDRQRAVDRFEGREVDVFLISLKA
                     GGTGLNLTSADTVVHYDPWWNAASQAQATDRAYR"
BASE COUNT          344 a          743 c          734 g          331 t
ORIGIN      
        1 atgcgatagg cgcgatcggt cgcttgcgcc tgcgaggccg cgttccacca ggggtcgtag
       61 tggacgacgg tgtcggcgct cgtgaggttc agccccgtgc cccccgcctt gaggctgatg
      121 aggaaaacgt cgacctcgcg gccctcgaag cgatcgaccg cgcgctggcg atcctgagtc
      181 gcgcccgtca gctcgacgaa ggcgatccgg cgctcgtcca ggccacgagc cagcagatcg
      241 agcatgcgcg tgaactgaga aaagacgagc acgcggcgcc cctgcccgag ctgcgtcgcg
      301 agcagctcga aaaacagctc gaatttggcg gactctttga cgcgccgcgc cgaaggcacg
      361 ctcacgagcc gcgggtcgca gcagacctgc cggagcttca tcagcgcgtc gaggatcgcg
      421 atggtcgcgc cttgcacgcc cttctcgcga atcgcgcgcc gcacgtcgcc gtgcgcggcc
      481 acgcgaatgc tctcgtagag ctcgcgttgg tcgcccccga gatcgacggg ccgcacgatc
      541 tccgtcttcg gcggcaagtc gcgcgcgacc gactccttca tgcggcggag cacgaaggga
      601 gtgaccgcgc tccggagcgc ctcgagccgc agctgattgc ccatgcgttc gatgggcacg
      661 cgaaactgcg tgcggaagct ctccgcgtcg cccaggaagc cgggcatcac gaaatcgaac
      721 agcgaccaga gctcctcgag gttgttttcg atcggcgtgc cgctcagaca cagccggtga
      781 cgcgccgtga gctcgcgcgc ggcccgcgcc gcgaggctgc gcggattctt gatcgcctgc
      841 gcctcgtcga ggatgacgag gtgataggcg tggctcttca gcgtctcgag gtcgcgcacg
      901 agcagcgggt agctcgtgag gatcacgtcg gctcgcgcga ggccgcggct gtcgcgcttg
      961 gggccgtgaa acggcatgac ctggagctcg ggcgcgaact tctggaattc ccggcgccag
     1021 ttgccgacga ggctcgtcgg catgacgatc agcaccggcc cgctcgcgcg ccccgactgc
     1081 ttttcgcgca ggacgtgcgt gatggtctgc agcgtcttgc cgagacccat gtcgtcggcg
     1141 agcacgcctc ccgcgtcgtt ctcgacgagc cccgcgagcc aggcgacgcc ctcttcttgg
     1201 taggggcgca gcgtcgcgca gaggccgcgc ggtaccgcgg gagcggcgct cgggctgctc
     1261 gttttctcgc cgaaaccgcg cgcgcgctcg atggcctggg tcatgcccga ccagagcagc
     1321 cgtgcgctgt cgccgagcgc ttgatcgagc ttggcgacgc tcgcggctcc cgtgcgcggg
     1381 aagcgcaagg tgccgtcctc gagcgtgtcg ccgcggtaga gctccagcag caccttcagc
     1441 aagaaccgca gccgcgccgg cgggatcgtg aggtaacggt tgtcgccgac gggcacggcg
     1501 cgcaggcgcg tcgtcacgtc gagcagcgac tcgaggcttt cgctgtcgcc gcgcgtctcg
     1561 agcatctcga gcagcgcggg caagagattc acgcgcttgc cctcgatctc gatgccgagc
     1621 tcgaggccga accaatcggt gcgctccgcg tccggttcga cggcggcgta ccagggcgtg
     1681 tcgctctcga cgacctgata cggatagctc ggatcgaccg tgacgaccca gccgagcgca
     1741 cgcagctgtg gcagcgcgca cgcaccgaac gagcaatacg tgtgcacgtc cccgtcgaat
     1801 tggacgagat agtccgcgtc cggatccggc cccgcgctca cgtgttcgga gcagtcgagc
     1861 tcgatcgcgc cgaagctctc gagcaaacac tgagcgcggg cttctccagc cagatcgcgc
     1921 cccacgacgc cgagcccgcc gccctcggcc acgaagaagc gcgtgcgccg atccgcggcg
     1981 cgcaccttgg tgccaccgta gtcgaaccac aacgaaatga cggggacgag gtcctcacgt
     2041 ccttcgtcga agctcccctc gcccgagctc acccacatgc gctcggtatg caggtgcagg
     2101 cagggtacga aggcgagcgg ttgttccgcg gggttcgacg atccgtccaa ga
//
LOCUS       DATIML010000148         2617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_896524, whole genome shotgun sequence.
ACCESSION   DATIML010000148 DATIML010000000
VERSION     DATIML010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_896524"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..901
                     /locus_tag="VLJ38_02605"
     CDS             <1..901
                     /locus_tag="VLJ38_02605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38421.1"
                     /translation="GAAAEHARERDPVAALDVGETALLAPGAPVGGQPEDSAAPVATS
                     ARAIDLGLGADGWKRWLASDHPSEGGPHAPAPGAPIVKAPPASTTGGLQEGLLEADLK
                     RVVGPSGRVVNALEDAAHGDGATAFGVARFAVTVLRTGGVEVRLESASAGEAEWKRVA
                     ERAAESLRANLPTIRPPSQGARFLVDLSAEMLLVDGRRVRSLHGPRVEATLPRVHTWA
                     AGERDMLRDNPTAASGLSRTDQMRAIVEIPGVYVAQNGKVCSYRFGLSLLGPLAQGGC
                     ELSNLGTKPQRVVHAHVTREELF"
     gene            complement(942..>2617)
                     /locus_tag="VLJ38_02610"
     CDS             complement(942..>2617)
                     /locus_tag="VLJ38_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38422.1"
                     /translation="RGVVWFGFRSFWGHWRHFLAAAIATEDVDSRDWMTADVPAELLA
                     RVVERLGGDPTAPTLTEALGRELFIDFIADTGDDVAVSRAVARLLFAEYELPDPERPA
                     AFLRAPRGEILIFGGDTAYPVATAQEIATRIVSPFNQVLEALPPDPTPRVLFGIPGNH
                     DWYDGLDGFARMFRRRQGDDEEPPNSAKFTPFMLQQYAEWAREFVRGGKIEKPRALVL
                     RDYAPVQNASYFALPLTPFVDLLAVDRQLRTPDSRQRDFLIDAYEAHPDRATFALLPD
                     PVYPFGGPSSTGTAMLESLHFDLGARDHFVLTGDVHHYARLERDRLLHVIAGGGGAFL
                     HPTRIAAGGIRTERAWPDAAQCKRMLRFVPLKVALGRSGLLPHLLLFLLFLPAVSFGA
                     RFWQERGVILSAPFATTCVLTIILALIGGVRRRKSVLPLAFGAALAMALTPIGISLAI
                     HGALVEVHRVTSPLVAAELTLAAAVLASAWLFGAYLSLLTRAGFEHTQAFTALDHPGY
                     KHFVRLRVHADGRRIDGWCLGLVDPLGAGQKPVLVDTFTWRPAPGTSVP"
BASE COUNT          432 a          836 c          987 g          362 t
ORIGIN      
        1 cggcgctgca gccgagcatg ctcgtgagcg cgatccggtc gcggcgctcg acgtcgggga
       61 gacggcgttg ctggcgccgg gcgcgccggt cggcggccag ccagaggact ctgcggcacc
      121 ggttgcgacg tcggcccgcg cgatcgatct cgggcttggt gcagacggct ggaagcgctg
      181 gctcgcgagc gatcacccga gcgagggggg gccgcatgcg cctgcccctg gcgctcccat
      241 cgtgaaggcg ccgccggcga gcacgacggg cggactgcaa gaggggctgc tcgaagccga
      301 tctcaagcgg gtcgtcgggc cgagtgggcg ggtcgtgaat gcgctcgagg acgccgcgca
      361 tggggacggt gcgacggcct tcggcgtcgc gcgcttcgcg gtcacggtgc tccgtacggg
      421 cggcgtggag gtgcggctcg aaagcgcgag tgcgggcgaa gcggagtgga aacgtgtcgc
      481 cgagcgcgcg gctgaaagcc tgcgcgcgaa cctcccgacg attcgtccgc cgagccaggg
      541 cgctcgtttc ttggtcgatc tgtcggcgga gatgctgctc gtcgacgggc ggcgcgtgcg
      601 tagcctgcat ggtccccgcg tcgaagcgac gctgccgcgc gttcacacgt gggccgcggg
      661 tgagcgtgac atgctgcggg acaatccgac ggcggcgtcc ggcttgtcgc ggaccgacca
      721 gatgcgcgcc atcgtcgaaa tcccaggcgt gtacgtggcg caaaacggca aggtgtgcag
      781 ttaccgcttc ggcttgagcc tgctcggacc actcgcccag ggcggttgcg agctctccaa
      841 tctcggaacc aagccgcagc gcgtcgtgca cgcgcacgtg acgcgcgaag agctgttctg
      901 agcgcgcgga ggcgctgcgt cccgcgccgc cactcggcgc gtcaggggac gctcgttccc
      961 ggcgcggggc gccaggtgaa cgtgtctact agcactggtt tttggccggc gccgagcgga
     1021 tcgaccaagc cgaggcacca gccgtcgatg cggcgaccgt cggcgtgcac gcgcagccgc
     1081 acgaagtgtt tgtagccggg atgatcgagg gcggtgaagg cttgggtgtg ctcgaagccg
     1141 gcccgagtga gtagactcaa gtaagcgccg aacagccacg cgctcgcgag cacggcggcg
     1201 gcgagcgtga gctcggcggc gacgagcggt gacgtgacgc gatgaacctc gacgagcgca
     1261 ccgtggatcg cgagcgagat gccgatgggc gtgagggcca tggcgagcgc tgccccgaac
     1321 gcgagcggga gcacgctctt tcttcgccgc acgccgccga tgagcgcgag gatgatggtg
     1381 agcacgcacg tcgtcgcgaa gggcgccgac agaatgacgc cgcgctcttg ccagaaacgc
     1441 gcgccgaacg aaacggccgg caagaacagc aagaagagca acaggtgcgg caggaggccc
     1501 gagcgcccca aagcgacctt gagcggcacg aagcggagca tgcgcttgca ttgcgcggcg
     1561 tcgggccacg cgcgctccgt gcgaataccg cccgccgcga tgcgcgtcgg atgcagaaac
     1621 gcgccgccac cgcccgcgat cacgtgcagg agtcggtcgc gctcgaggcg cgcgtagtgg
     1681 tgaacgtcgc ccgtgagcac gaagtgatcg cgcgcgccga ggtcgaaatg gaggctctcg
     1741 agcatggccg tgccggtgga gctcgggccg ccgaagggat agacgggatc cggcaggagc
     1801 gcgaaggtcg cgcgatcggg gtgcgcctcg taggcgtcga tcagaaagtc gcgctgacgc
     1861 gagtccggcg tgcgcagttg acgatcgacg gcgagcagat cgacgaacgg cgtgagcggg
     1921 agcgcgaagt agctcgcgtt ttgcaccggc gcgtagtcgc ggagcacgag cgcgcgcggt
     1981 ttttcgatct tgccgccacg cacgaactcc cgcgcccact cggcgtactg ctgcagcatg
     2041 aacggcgtga acttggcgga gttcggcggc tcctcgtcgt cgccctgccg gcgccggaac
     2101 atgcgagcga aaccgtcgag tccgtcgtac cagtcatggt tgcccgggat gccgaacagg
     2161 acgcgcggtg tcgggtcggg cggcagcgct tcgagcactt gattgaaggg cgagacgatg
     2221 cgcgtcgcaa tttcctgcgc cgtcgcgacg ggatacgccg tatcgccacc gaaaatcagg
     2281 atttcaccgc gcggcgcgcg caagaatgca gcgggccgct ccggatcggg cagctcgtat
     2341 tcggcgaaga gtaagcgcgc cacggcccgg ctcaccgcga cgtcgtcgcc cgtgtctgcg
     2401 atgaaatcga tgaagagctc gcggccgagc gcttcggtca atgtcggcgc cgtcgggtcg
     2461 ccgccgagtc gctcgaccac gcgcgccaag agctcggcgg ggacgtcggc cgtcatccag
     2521 tcgcgcgagt cgacgtcttc ggtggcgatc gctgccgcga ggaagtgacg ccagtgcccc
     2581 cagaacgaac gaaagccgaa ccacacgacg ccgcgcg
//
LOCUS       DATIML010000149         2299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5518167, whole genome shotgun sequence.
ACCESSION   DATIML010000149 DATIML010000000
VERSION     DATIML010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5518167"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2100)
                     /locus_tag="VLJ38_02615"
     CDS             complement(<1..2100)
                     /locus_tag="VLJ38_02615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38423.1"
                     /translation="MGALDDLLKAWRKNPDADSTVALCTYVGASGQEALVREIGKTAE
                     QWHAQDATVMLSVGRMYLDASLLPEAQASLVVAGKADAMSPKPYRYLGEVLLRRGDAL
                     RAEKVLARAMQLGLKDAETAHWHDRATFYIALQKRVGAPAVAGEVARSLPKVLSIPAP
                     QIRPEPFVAEEPTNPRAGKLSRFGSVEEVSQVEELSDVTEEPTRRAVIPQEPSRHVRA
                     RTMIGVAPPAGGVAPGGRVLYQGQARAAVAMQDRNPIQLPARGAAQASRAPAQARPLP
                     SPPPPRTDPEDETKRYDADFQMEADAGVEDDEATQIARIAFDAPTRPAGARSSPVASA
                     PAKLPALVPPLSAARAPKAAAVAAAKSASAPAPKPGGAPQPSRTAVTQATRAARSPLV
                     VPAPTARTTQPEPFPAFVSEPPRDDETEEHERYDGPLPPSVLFEHLARVGMFEPSGGA
                     APAWEKAPAQKTRGNWLLLTACVLLAGAGVGGWQYARQIKAERAARAETLASEVERLL
                     DSGGTAELRSTDEKLSKAFDLDSRSRRAARLWLENRVLHALLLVEESRGMDSAIYRGR
                     TVGLPEKDLAFGRMAAFLVEGDLAGAASQLPKWDKEAGHDPMYQLAAGAVLERAGDLR
                     AIERYEAARSLDPKLVVADILLARLALLELGKDRALPVIQSLQAKVGDAPSVRALKGL
                     AWVVDPARADEPPAEAKL"
BASE COUNT          339 a          785 c          815 g          360 t
ORIGIN      
        1 gagcttggct tccgcgggcg gctcgtcggc gcgcgccggg tcaacgaccc aggcgagccc
       61 cttcagcgcc cgcacgctcg gcgcgtcgcc caccttggcc tgtagcgact ggatcacggg
      121 cagagcgcgg tccttgccga gctcgagcag ggcgagccgg gcgagtagaa tgtcggcaac
      181 gactagcttc ggatcgagcg agcgtgcggc ttcgtagcgt tcgatggcgc gcagatcgcc
      241 ggcgcgctcg agcacggcgc ctgccgcgag ttggtacatc gggtcatgcc cggcctcttt
      301 gtcccacttc ggcagctggg aggccgcgcc ggcgagatcg ccttcgacca ggaacgccgc
      361 catgcgaccg aaagcgaggt ccttctccgg gagacccacc gtccgccctc ggtaaattgc
      421 cgagtccatg ccgcgcgatt cctcgaccaa gagcagcgcg tgtaagacgc gattttcgag
      481 ccaaagacgc gcggcgcgac ggctgcgcga gtcgagatcg aacgctttgc tcaacttttc
      541 gtccgtggag cgaagctccg cggtcccgcc gctgtcgagc aaacgctcca cttcgctcgc
      601 gagcgtctcg gcacgcgcag cgcgctcggc tttgatttgg cgcgcatact gccagccgcc
      661 cacgccggcc cccgcgagca gcacgcaagc cgtcaagagg agccagttgc cgcgcgtctt
      721 ctgcgcgggc gccttttccc aagccggcgc ggcgcccccg gacggctcga acatgccgac
      781 ccgcgcgaga tgctcgaaca gcacactcgg cggcagcggg ccgtcgtagc gctcatgctc
      841 ctcggtctcg tcgtcgcgag gcggctccga gacgaaagcg gggaacggct cgggctgcgt
      901 cgtacgcgcc gtcggcgcgg gaacgacgag cggcgagcgc gccgcccgcg tcgcctgcgt
      961 gacggccgtt cgcgacggct gcggagcgcc tcccggtttc ggcgcgggag ctgacgcgga
     1021 tttcgctgcg gcaaccgcgg cagctttcgg cgcacgcgcg gcggagagag gcggaacgag
     1081 cgcggggagc ttcgccgggg ccgaggccac ggggctcgaa cgcgcgccag cgggacgcgt
     1141 gggcgcgtcg aaggcgatgc gcgcgatttg cgtcgcctcg tcgtcctcga cgccggcgtc
     1201 tgcctccatc tggaagtcgg cgtcgtagcg cttcgtctcg tcctcgggat cggtccgtgg
     1261 cggcggcggc gacggcagcg ggcgcgcttg cgccggcgct cgtgaggctt gcgctgcacc
     1321 gcgcgccggc agctggatcg ggtttcggtc ctgcatcgcg accgctgcgc gcgcttgccc
     1381 ttgataaaga acccgcccgc ccggcgcgac gccgcccgcg ggcggcgcga cgccgatcat
     1441 ggtgcgggcg cgcacgtggc gcgaaggttc ttggggaatg actgcccgcc gcgtgggctc
     1501 ctcggtcacg tccgagagtt cctcgacttg actcacctct tcgacggacc cgaagcggga
     1561 cagcttgccg gcacgcggat tggtcggctc ctcggcgacg aaaggctcgg ggcggatctg
     1621 cggcgcggga atcgagagta ctttgggcag cgagcgcgcc acctcgccgg cgacggcggg
     1681 tgcaccgacc cgtttttgca gcgcaatgta gaaggtcgcg cgatcgtgcc agtgcgcggt
     1741 ctccgcgtct ttcagcccga gctgcatcgc gcgcgcgagc actttctcgg cgcggagcgc
     1801 gtcaccgcgc cggagcaaca cctcgccgag gtagcggtac ggcttgggac tcatggcgtc
     1861 cgctttgccg gcgacgacga gcgacgcttg cgcttcgggc aaaagcgacg catcgaggta
     1921 catgcgtccc acggagagca tcacggtcgc gtcctgcgcg tgccactgct cggcggtctt
     1981 gccgatctcg cgcacgagcg cttcctgacc ggaggctccc acgtaggtac aaagcgcgac
     2041 ggtcgagtcc gcgtcgggat tcttgcgcca cgccttgagt agatcgtcga gagcacccaa
     2101 gctactggct ctccgagctt gtcatccgag ctcgaggata gcggagcttt tcgagcaaag
     2161 cgggcggaaa aacaaaacta tcgggccgag tggccgagtt ccaacgcagg cgtcatggtc
     2221 atgctccggc cgcgccgagg ctcgacttga gcgaggcgta ggagaccagc cggatttatc
     2281 tgctagagag agctcccct
//
LOCUS       DATIML010000150         3167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1186743, whole genome shotgun sequence.
ACCESSION   DATIML010000150 DATIML010000000
VERSION     DATIML010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1186743"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            280..966
                     /locus_tag="VLJ38_02620"
     CDS             280..966
                     /locus_tag="VLJ38_02620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38424.1"
                     /translation="MPIDARSVSRYLTLAITLAGCASTPAAPPQAPTSEPTATAKTPA
                     PEAKAAKPEAASKDAKSSASDEPDPRADGLRKASRPPADLITGPNLVYVFNFKESEVG
                     QAAKARCSEQSDDPGAVGACLQKARGKVPVELIRFIKEPSGQLWWVTYNRYKGNLLKW
                     HRVQFQAGNETADRITLNLVGEDKGIAPMARVPHHLEIELPNDYSIVVKDSEFGAMMY
                     DAKIGTMEVD"
     gene            complement(1008..1646)
                     /locus_tag="VLJ38_02625"
     CDS             complement(1008..1646)
                     /locus_tag="VLJ38_02625"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSU38425.1"
                     /translation="MVIAFGRGVSKIGSRAAAFAAALTLLGCASDAGADGDATVTTAM
                     QSEQVRGHDNESVSADLQQQISQVLWGCYAVGADLVGAGDVQNAKNVLRHCFADDMDS
                     QTVTPPAYASLAFNTSGGADNWVDVSNALYRGLGLTRVQHLITNIVVYPKGPNAATVT
                     SGALAVHVYADEHTFNATVKFSDDFRRIDGTWKIKHRVMTVISLTESPAWAP"
     gene            complement(1679..2854)
                     /locus_tag="VLJ38_02630"
     CDS             complement(1679..2854)
                     /locus_tag="VLJ38_02630"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSU38426.1"
                     /translation="MTNDTGRTRGDWLTQMRALAPQVEKWRDAAERERHLPRPLFEAL
                     REAGVFALSTPKAVGGAEVEEAIAVAVVEELSRLDGSVGWNAMVASNTATITSYLRMP
                     ALQELYRNGPSAVVAGALLPKGMAVPVGNGYRLSGRWTLASGCRQADWLVACSAIVVD
                     GAPRLRPDGRPDVRTLHLPMQDCKILDTWHTAGLRGTGSHDCEVQDVVVPEERTTSIL
                     FDGPRVAGALYVKDFAAFAVARVAAVALGIARDAIDSFTALAKTKTPTVATTTLANQH
                     TVHERVGRAEGLLRAGRALLYETIGALPYTPAWSESLGDEQRASIRLAGAVAAEHAAA
                     AVDLMFNAAGTSAIYDSSRLERCFRDVHVATQHINVASSNLEMVGQYLLGLGLHFRR"
     gene            complement(2920..>3167)
                     /locus_tag="VLJ38_02635"
     CDS             complement(2920..>3167)
                     /locus_tag="VLJ38_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38427.1"
                     /translation="RRVPSWLLKCVALFDKTVAVAVPELGKRQDVSCARAREVLDFTP
                     RSLERTVIDMGESMLKLGLVPTPKRKGRAPASATESA"
BASE COUNT          529 a         1047 c         1038 g          553 t
ORIGIN      
        1 tatccggtca tactcgatct ggttcgtcgg ctttcgcccg tcatcagggt gttgcgttcg
       61 cgtagctcgg cgctcgctgt ttcatcgcgt catcggcacg ctcgtgcggc tgacagagcc
      121 gcgccattga gcgaagcgct aggtggtcgg ggcgcggtgc gcagcggctc ccactcgttt
      181 ttttcgtgag ctcttcagtt gtcgttcggt tcgtcgttcg atcattcgaa ggagagctct
      241 gcgtccagcg ccaatgacgc ggagcctgaa ccgaagagca tgcccatcga cgcccgatcc
      301 gtctcccgtt acttgacctt ggccatcaca ctggcgggtt gtgcgagcac gcccgccgcg
      361 cccccccagg cacccacctc ggagccgacc gcgaccgcga aaactcccgc acccgaggca
      421 aaagcggcaa aacccgaggc ggcgagcaag gacgccaaat ccagcgcgtc cgacgagccc
      481 gacccgcgag ccgatggttt gcgcaaagcg agccgtccgc cggccgacct catcacgggt
      541 cccaatctcg tgtacgtgtt caacttcaag gaatcggaag tcggtcaggc cgccaaggcg
      601 cgctgctccg agcagagcga tgaccccggt gcggtcggcg catgcctgca aaaagcccgc
      661 ggcaaggtcc cggtcgagct cattcgcttc atcaaggaac cgtcgggtca gctctggtgg
      721 gtgacctaca accgctacaa gggcaacctg ctcaagtggc accgcgtgca attccaagcc
      781 ggtaacgaga cggccgatcg catcacgctg aacctcgtgg gcgaagacaa aggtatcgcc
      841 ccgatggcgc gcgtgccgca ccatctcgag atcgagctgc cgaacgacta ttcgatcgtc
      901 gtcaaggact cggagttcgg cgccatgatg tacgacgcga aaatcggcac gatggaagtg
      961 gattgaagcg gcggcgccag gggattgctc acggccgggg cgtcagacta cggcgcccac
     1021 gccggggact cggtgagcga gatgaccgtc atcacgcggt gcttgatttt ccaagtgccg
     1081 tcgatgcgac gaaagtcgtc actgaatttg acggtggcgt tgaaggtatg ctcgtcggcg
     1141 tagacgtgaa ccgcgagcgc gccgctcgtg acggtcgcgg cgttcgggcc cttcgggtaa
     1201 accacgatgt tcgtaattag gtgctggacg cgggtgagtc cgagccctcg gtaaagcgcg
     1261 ttcgaaacgt ccacccagtt gtcggcgccg ccgctggtgt tgaaggcgag actcgcgtac
     1321 gcgggcggcg tcaccgtttg gctatccatg tcgtcggcga agcagtgacg cagtacgttt
     1381 ttcgcgtttt gaacgtcgcc cgcaccgacg agatcggctc cgaccgcgta gcagccccag
     1441 agcacttggg aaatctgctg ctgcaagtcg gcgcttacgc tctcgttgtc gtggccccgc
     1501 acttgctcac tctgcatggc cgtcgtcacg gtcgcgtcgc cgtcggcgcc cgcgtcggac
     1561 gcgcagccga ggagcgttag cgcggccgcg aaggccgccg cccgtgaccc gattttcgat
     1621 acgccgcgac cgaatgctat gaccatctgc gattcctttt ctcgctcaac gcgttggctc
     1681 agcgccggaa atgaagcccg agcccgagca ggtactggcc caccatctcc aagttggagg
     1741 acgccacgtt gatgtgctga gtcgccacgt ggacatcgcg aaagcaacgt tcgagtcggc
     1801 tcgagtcgta gatggcgctc gttcctgcgg cgttgaacat gaggtccacg gcggccgccg
     1861 cgtgctccgc cgcgacggcg ccggcgaggc ggatgctcgc gcgttgctcg tcaccgagcg
     1921 actcggacca agcgggcgtg tagggcaggg cgcctatcgt ttcgtaaagg agcgcacggc
     1981 cggcacgcag caggccttcc gcgcggccga cccgttcgtg caccgtgtgc tggttcgcga
     2041 gcgtcgtcgt ggcgacggtc ggcgtcttcg tcttggcgag ggccgtgaac gaatcgattg
     2101 cgtcgcgtgc aatcccgagc gctacggcgg cgacgcgggc gaccgcgaag gcggcgaagt
     2161 ccttgacgta gagcgctcct gccacgcgcg ggccgtcgaa caggatcgac gtcgtgcgct
     2221 cttcgggcac gaccacgtcc tgaacttcgc agtcatggct gcccgtgccg cgcagccccg
     2281 cggtgtgcca ggtgtcgagg atcttgcagt cctgcatcgg caagtgcagt gtccgcacgt
     2341 cgggacggcc gtcgggacgc agccgcggcg cgccgtccac gacgatggcg ctacaagcga
     2401 cgagccaatc ggcctgtcgg cagccgctcg cgagcgtcca gcgcccgctc aagcggtagc
     2461 cgttgccgac gggcacggcc atgcccttcg gcagcagcgc gccggcaacg accgcgctcg
     2521 gaccattgcg gtagagctcc tgaagtgcgg gcatgcgcag gtaggaggta atggtcgccg
     2581 tgttcgacgc gaccatggcg ttccagccca ccgagccgtc gagccgcgaa agctcctcga
     2641 cgacggcgac ggcaattgcc tcttcgacct cggcgccgcc cacggctttg ggagtcgaga
     2701 gagcaaacac gcctgcttca cgcagcgctt cgaatagcgg ccgcggcaag tggcgttcgc
     2761 gctcggccgc gtctctccat ttttcgacct gcggcgcgag cgcgcgcatc tgcgtgagcc
     2821 aatctccgcg ggtccgaccc gtgtcattcg tcatcgacgc ttctcctctt catgcaggat
     2881 tgccgagcgg ccgccgcgcc ggcggccgtg ctcgcccaat caggcggatt cggtggccga
     2941 agcgggagca cggcctttgc gcttcggcgt cggcaccagg ccgagcttca gcatgctttc
     3001 ccccatgtcg atcaccgtcc gttccaggct acgcggcgtg aaatccagca cttcacgcgc
     3061 gcgcgcacag gaaacgtctt gccgcttgcc gagctcaggc accgcgacgg cgaccgtttt
     3121 gtcgaacagg gcgacgcatt tgagcaacca gctcggcacg cggcggg
//
LOCUS       DATIML010000151         3191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_320659, whole genome shotgun sequence.
ACCESSION   DATIML010000151 DATIML010000000
VERSION     DATIML010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3191
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320659"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="VLJ38_02640"
     CDS             <1..692
                     /locus_tag="VLJ38_02640"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU38428.1"
                     /translation="RYSAGRFSFNVASGRCETCKGEGFVMVELLFLPSVYAPCQTCKG
                     SRYDATTLEVRYRERNIAEVLGMTVDEASSFFEGEAGVLRALSTLKEVGLGYLRLGQP
                     ANELSGGEAQRIKLATELQRAQRDGAVYVLDEPTTGLHPSDVERLMLQLQRLVDAGAT
                     VIVVEHDMRVIAQSDHIIDLGPGAGDEGGRIVVSGTPAAVARSGRGKTAEYLRQAADS
                     SSRSAVRECRS"
     gene            complement(701..1681)
                     /locus_tag="VLJ38_02645"
     CDS             complement(701..1681)
                     /locus_tag="VLJ38_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU38429.1"
                     /translation="MLRLLRILVVTFFTTLAARLRRGPARPSWGFQFEWVVAFLRKDF
                     EESAAWPYEKLRRDLDSRRYPSKALPQVTRETTTLGGVPAVWFRPKRARRGVLLLLHG
                     GSYIFGSVRTSHADLAASLAVFSGVAVVGIDYRLAPEHPYPAALEDALAAFDALLRDG
                     LSAQEIIVAGDSAGGNLALALQLSLRDRKRAQARATLLLSPWLDLTASLPSCRAGDAL
                     DYGQTSFLLKHARDFAGGIALDDPRVSPLSASLGALAPLLVVIGGAERLADEGRALVT
                     KAQAAGVSAELLVADDMPHNPLVLAAFHPRAAEALRASAQFVKKTLERPA"
     gene            1769..2734
                     /locus_tag="VLJ38_02650"
     CDS             1769..2734
                     /locus_tag="VLJ38_02650"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator
                     ligand-binding domain-containing protein"
                     /protein_id="HSU38430.1"
                     /translation="MSDTISAAMVLRLVRLLERRGAELEPLLATAGIAEATLQTEGAR
                     IDYAAADRLLEAAAAKLGAAELGLELALTRIDESYGAPGLLLLTAPTFRTGLERAFAY
                     QRLWGDGQRFRLSAVAGDAVVSFRHAGSSRLAAAITAECALVEVVEGLRALVQRDATP
                     RAVAFAHEPLGDVSALVCHFGVAPGFGAAESHVVLPATLVDRPLHGLRDLLSDAFERQ
                     AARALALLPRRASITDRVRPLLAGEAGVARSLGDLAAAVRLSPRTLQRRLRREGVTFE
                     ALLDEARCALARDLSAQGLPATEIAFRLGFQDTSALARARRRWQR"
     gene            2758..>3191
                     /locus_tag="VLJ38_02655"
     CDS             2758..>3191
                     /locus_tag="VLJ38_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38431.1"
                     /translation="MSHATTTGRSFFALLALFALCCVGRSSPAAATPSLVLVAEVPLP
                     GKAVRFDYQAVDSANKRLFITHMNDASVVVVSTRDGSVLKVLPAIPTPRGVAVAPEAR
                     RVFVTSSPGKLVIIDSESLSELTRVTTGRAPDGVAWDPSHRIV"
BASE COUNT          510 a         1079 c         1080 g          522 t
ORIGIN      
        1 gccgttacag cgccggccgc ttttcgttca acgtcgcgag cggccgctgc gaaacctgca
       61 agggcgaagg cttcgtcatg gtcgagctcc tgttcttgcc gagcgtctac gcgccctgtc
      121 agacctgcaa aggctcgcgc tacgacgcca cgacactcga agtccgctat cgcgagcgga
      181 acatcgccga agtgctcggc atgaccgtcg acgaggcgtc cagcttcttc gagggtgagg
      241 ccggtgtgct tcgagcgcta tcgacactaa aagaggtcgg actcggttac ttgcgcctcg
      301 gtcaacccgc gaacgagctc tcgggcggcg aagcccagcg catcaagctt gccaccgagc
      361 tccagcgagc gcagcgcgac ggcgctgttt acgtcctcga cgaaccgacg acgggtctcc
      421 acccctccga cgtcgaacgg ctcatgttac aacttcaacg gctggtcgac gcgggcgcga
      481 ccgtcatcgt ggtcgagcac gacatgcgcg tcatcgccca aagcgaccac atcatcgatc
      541 tcggccccgg cgcaggcgac gaaggcggcc gcatcgtcgt gagcggcacg cccgcagccg
      601 tggcccgctc gggacgaggc aagacggcgg agtacctgcg gcaggctgcg gattcgagct
      661 cgcgttcggc agtccgtgag tgtcggtcgt gacgcagcgc ctacgcaggg cgctccaacg
      721 tcttcttcac gaactgcgcg gaggcgcgca gagcttctgc ggcacgcggg tgaaaagcag
      781 cgaggaccag ggggttgtgc ggcatgtcgt ccgcgaccag gagctcggcg gaaacgccgg
      841 cggcttgcgc cttcgtgacg agtgcccgac cttcgtcggc caggcgctcg gcgccgccta
      901 tcacgaccag caacggcgcg agtgcgccga ggctcgcgct tagcggagac acgcgcgggt
      961 cgtcgagcgc gatgccgccc gcgaagtcgc gcgcatgctt gagcagaaat gacgtctgcc
     1021 cgtagtcgag agcgtcccct gcacggcacg acggaaggct cgccgtgaga tccaaccagg
     1081 gcgacagcag caacgtggca cgcgcttgcg cgcgctttcg atcgcggagc gagagctgca
     1141 aggcgagcgc gaggtttcca cccgccgagt cgccggcgac gatgatctcc tgagcgctga
     1201 gtccatcgcg gaggagcgcg tcgaaagcag cgagcgcgtc ttctagcgct gcaggatacg
     1261 gatgttccgg tgcgagtcga tagtcgatgc ctaccaccgc gacgccgctg aaaaccgcga
     1321 ggcttgccgc caggtcggcg tggctcgtgc gaaccgagcc gaagatgtag gagccgccgt
     1381 ggagcagcag cagcacgccc cgcctcgccc gcttgggccg gaaccagacc gccggcacgc
     1441 cgccgagcgt cgtcgtttcg cgtgtgactt gcgggagcgc tttggaggga taccgtcgcg
     1501 agtcgaggtc gcgacgcagc ttctcgtagg gccaagcggc cgattcctcg aaatctttgc
     1561 gcaagaaggc gacgacccac tcgaattgaa agccccacga cgggcgcgcc ggaccccgtc
     1621 gaagccgagc cgcaagtgtc gtaaagaacg tgacgaccag gatgcgcagc aatcgcagca
     1681 cggtgaaaat gctagctgtt cttcggcgcc accagcgaag cctgacgcgc cagatcggcg
     1741 ggcttcgcgc gccacggagg ttgccgccat gagtgacacg atctcggccg ccatggtgct
     1801 gcgtctcgtg cgtctactcg agcgccgtgg cgctgaactc gagcctctgc tcgcgacggc
     1861 aggtatcgcg gaggcgacgc tccagaccga gggtgctcgc atcgactatg cagccgccga
     1921 tcgactgctc gaggcggctg cagcaaagct cggcgccgca gagctcggtc tcgagctcgc
     1981 actaacgcgc atcgacgaaa gctacggcgc gcccggcctg ctgctgctca ctgcgcccac
     2041 gtttcggacg gggctagagc gtgctttcgc gtatcagcgc ctttggggcg acgggcagcg
     2101 tttccggctg agcgcagtgg caggggacgc agtcgtcagt tttcgtcacg cggggtcctc
     2161 acgcttggcg gcggccatca cggcagaatg cgcgctcgtc gaggtcgtcg aaggcttgcg
     2221 cgcgctggtc cagcgcgacg ccacgccgcg cgccgttgcc ttcgctcacg agccgctcgg
     2281 cgacgtgagc gcgctggttt gccatttcgg ggtcgcgcca ggtttcggtg ccgccgaaag
     2341 tcatgtcgtg ctgccggcta ccttggtcga ccgccccctg cacggcctcc gcgatttgtt
     2401 gagcgacgcc ttcgagcggc aagctgcgcg ggcgctcgcg ctcttaccgc gccgcgcttc
     2461 gatcacggat cgcgtgaggc cgctcttggc gggcgaagcc ggggtcgcgc gctcgctcgg
     2521 cgacctcgcc gccgcggtgc gcctgagccc gcgcacactg cagcgtaggc tgcggcgcga
     2581 gggcgtgact ttcgaggctc tactcgatga agcgcgctgc gccctcgccc gcgatctcag
     2641 cgcgcagggg ctccccgcga cggagatcgc gtttcgcctc ggctttcaag atactagcgc
     2701 gctcgcgcgc gcgcgccggc gctggcaacg ctaatcgctt ttgagcaaac tacgacgatg
     2761 agccacgcga cgacgacggg acgctcgttt ttcgcgctgc tggcgctgtt cgcgctctgt
     2821 tgcgtcggtc ggtcctcgcc ggcggccgcg acgccatcgc tcgtgctcgt ggccgaggtc
     2881 ccgctacccg gcaaggccgt gcgcttcgat tatcaagctg tcgactccgc gaacaagcgg
     2941 ctgttcatca cccacatgaa cgacgcgtcc gtggtcgtcg tcagtacgag agacggctcc
     3001 gtgctcaaag tgctgcccgc tattcctact ccacgcggtg tcgccgttgc accagaggct
     3061 cggcgcgtgt tcgtcacgag ctcgccgggc aagctcgtca tcatcgacag cgagtcgttg
     3121 tccgagctca cgcgcgtcac gaccgggcgc gcgccggacg gtgtggcgtg ggatccctcg
     3181 caccggatcg t
//
LOCUS       DATIML010000152         4331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4653032, whole genome shotgun sequence.
ACCESSION   DATIML010000152 DATIML010000000
VERSION     DATIML010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4331
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4653032"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1049)
                     /locus_tag="VLJ38_02660"
     CDS             complement(<1..1049)
                     /locus_tag="VLJ38_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HSU38432.1"
                     /translation="MSSASVTLPIALQGVTPEELAAALSAVNIEDARRIVSTVHRDGD
                     VAEPNSCVRRVAREAVVTHGRVPALAIVSRTASGLDPFVKFALRTADDKLIETVRIPL
                     ERAGRFSVCVSSQVGCALACAFCATGRLGLRRNLETWEIIEQVRIVRRTLDAAQGERV
                     HGIVFQGMGEPLANQEQVFGALRVLTDPSACAIDARKITVCTAGLPSGIRRLAREAPR
                     VRLGWSLGTARVGARRALMPIDTAHPLEDVYAACVEHAQTTGLSPLWAVTLLAGVNDG
                     EDDAVALAALARRFVADTGRTPRISVIPYNRIADDASDPFRRSPDDAERLFRDALHRA
                     GTFTHKRYSGGSDIGA"
     gene            1206..1919
                     /locus_tag="VLJ38_02665"
     CDS             1206..1919
                     /locus_tag="VLJ38_02665"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HSU38433.1"
                     /translation="MHGSTVFLIAFFTSVLTAGGTVYAIDRFGILHHDPPPVADAIVP
                     DLRGFSEADARANAQASHITLLVGSHEPSGDAKPGAIVRQSVPAGQHVPREHPVSVVI
                     AEELPKVPSVTGLSVVDATKRLEEKGYKLQASAPVANATVPEGQIIAQAPPAETPTEK
                     GKTVTVQVSAGAGEVAMPKVMGLSLKNAQTALEKVGLDSDVRWVSLAETPTFIVLNQK
                     PKPAEKVKPGTKVELTANR"
     gene            2015..2851
                     /locus_tag="VLJ38_02670"
     CDS             2015..2851
                     /locus_tag="VLJ38_02670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38434.1"
                     /translation="MAARNPFASSDLFDDPYGLVQSSRPVRHSTGYYFIRNLLFVGAV
                     AGGIVAAYRNDVFRDLARQAGLEQRYLETEKFLVGTPGWGTPRSMEPVLNPGQATSDA
                     HPAATSDTSAPATTAALTATAAPTEPPAAVTAEPPAAPARVAAPASFHAAPALTQTAA
                     THSAAAEPPLHRTATPAPVAHAAPAPVAHASAPRPAPVDHTHVKAIKVSLEEDAPAEP
                     AARHTAPTHAAPPPEAPAPVATKPQKPEKPQPKATDAHDGDNPLLAAVRGAVRSRPPK
                     GE"
     gene            complement(2858..3841)
                     /locus_tag="VLJ38_02675"
     CDS             complement(2858..3841)
                     /locus_tag="VLJ38_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HSU38435.1"
                     /translation="MHALLFERPGAALRVTELPEPTPGPGELLLEVRACGVCRTDLHV
                     FDGELTQPKLPLVLGHEIVGTVVAQGAGAARFPLGARVGVPWLAWTCGECVQCRARRE
                     NLCERGRFTGYTRDGGYATRTVADERYCFAIPAAYDDAHAAPLLCAGLIGYRALRAAS
                     DARALGIYGFGAAAHIVAQVARFEGRRLFAFTRRGDDAAQSFARSLGAEWAGPSDGPA
                     PEPLDAALLFAPVGALVPHALRAVRPGGVVVCAGIHMSDIPAMPYELLWGERVLRSVA
                     NLTRDDGERFFEIAAKTPLQTHVETLPLDHANDALERLRRGAVQGALVLRP"
     gene            complement(3943..>4331)
                     /locus_tag="VLJ38_02680"
     CDS             complement(3943..>4331)
                     /locus_tag="VLJ38_02680"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HSU38436.1"
                     /translation="PARACGGLGSSKGGDRRNIMSLRIYPVVLELVRRLAPLVRVLRA
                     RSSVLADQMERALISVPLNVAEGAYSRGKNRQARFQSAAASARETLACLEIAEAMGFI
                     GPVEPELAALFHRVIGTLVRLVEPRR"
BASE COUNT          712 a         1519 c         1508 g          592 t
ORIGIN      
        1 gcgccgatgt cggagccgcc gctgtaacgt ttgtgcgtga aggtgccggc gcgatgcagc
       61 gcgtcgcgga agagacgttc ggcgtcgtca ggactgcggc ggaaaggatc gctcgcgtcg
      121 tcggcaatgc ggttataggg gatgacgctg atgcgcggtg tccggcccgt gtcggcgacg
      181 aagcggcggg cgagcgcggc gagggcgaca gcgtcgtctt caccgtcgtt cacgcccgcg
      241 agcagcgtga cggcccagag cggggagagc ccggtcgtct gcgcgtgttc gacgcaggcg
      301 gcgtaaacgt cctcgagcgg gtgcgcggta tcgatgggca tgagcgcacg acgagcgccg
      361 acgcgcgccg tgccgagcga ccagccgaga cgcacccgcg gcgcttcgcg cgccaggcgg
      421 cgaatgccgg agggtaggcc cgccgtgcac accgtgatct tgcgcgcgtc gatcgcgcac
      481 gcgctcgggt cggtgagcac gcgtagcgcg ccgaacactt gctcttggtt ggcgagcggc
      541 tcgcccatgc cctggaacac gatgccgtgc acgcgctccc cctgggcggc gtcgagcgtg
      601 cgccgcacga tgcgcacctg ctcgatgatt tcccaagtct cgaggttacg gcgcaggccc
      661 aggcggcccg tcgcgcagaa agcgcacgcg agcgcgcagc cgacctggga gctcacgcac
      721 acgctgaagc gccccgcgcg ctcgagcgga atacgcaccg tctcgatgag tttgtcatcg
      781 gcggtgcgga gcgcgaactt gacgaacgga tcgagcccgc tcgccgtacg gctcacgatc
      841 gcgagcgccg ggacgcgacc gtgcgtcacc accgcttcgc gcgccacgcg ccgcacgcac
      901 gaattcggct ccgccacgtc gccgtcacgg tgcaccgtcg agacgatgcg ccgcgcgtcc
      961 tcgatgttca cggctgaaag cgcggccgcg agctcctcgg gcgtgacgcc ctgaagcgcg
     1021 atcggcagcg tgacggaagc ggagctcacg gcgggcgcct taccactttc ggctccgagc
     1081 tgccggacgc tcgctattca gtgggtgtta tccctttaga attgcctgcg ggcgtgccgt
     1141 cgccgtagac tatgggcttg gcgtacgaag gctgggacga ccgctatcgg cgagggagtg
     1201 acggtatgca cggatccacg gtgttcctga ttgcgttctt tacttcggtg ctgacggcgg
     1261 ggggcaccgt ctacgccatc gaccgcttcg gtatcttgca ccacgacccg ccgcccgtcg
     1321 ccgacgcaat cgtgcccgat ttgcgcggtt tttcggaggc ggacgcgcgc gcgaacgctc
     1381 aggcctcgca catcacgctg ctcgtcggct cgcacgagcc gagcggcgac gcgaagccgg
     1441 gcgcgatcgt gcggcagtcg gtccccgcgg ggcagcacgt tccgcgcgag caccccgtga
     1501 gcgtcgtcat cgcggaggag ctgcccaagg tgccgagcgt gaccggactt tcagtggtcg
     1561 acgcgaccaa gcgcctcgaa gagaagggct acaagctcca agcgtcggcc ccggtcgcga
     1621 acgcgacggt gccggagggg cagatcatcg cgcaggcgcc gcccgccgaa acgcccacgg
     1681 aaaagggcaa aaccgtgacc gttcaggtct cggccggcgc gggggaagtc gcgatgccga
     1741 aggttatggg cctgtcgttg aagaatgcgc agaccgcgct cgagaaggtg gggctcgact
     1801 ccgacgtgcg ctgggtctcg ctcgccgaga cgccgacctt catcgtgctg aaccaaaaac
     1861 ccaagcctgc cgaaaaagtg aagcctggga cgaaggtcga gctcaccgcg aatcggtgag
     1921 cgatcgcggc ggtcgctgct cgaaaggcgt gctagagtct cgatcccgag tgctgcgcga
     1981 cgagcggtgt cgcgccaacc cgtgaacgag gatcatggcg gcacgaaatc cctttgcgag
     2041 ctccgatctc ttcgacgacc cctacgggct cgtgcagtcg agtcgcccgg tgcggcactc
     2101 gacgggctac tatttcatac ggaatttgct gttcgtcggc gcggtcgccg gcggcatcgt
     2161 cgcggcctac cgcaacgacg tgttccgcga tttggcgcgc caagccggcc tcgagcagcg
     2221 ctacctagag accgagaaat tcctcgtcgg taccccgggt tggggcacgc cgcgctcgat
     2281 ggagcctgtc ctgaaccccg gtcaggccac ctctgacgct catcccgctg cgacgagcga
     2341 cacctcggct ccggcgacga ccgcagccct cacggcgacc gccgcaccga ccgaacctcc
     2401 ggcggcggtg acagccgagc ctcccgccgc accggcacgc gtggcggcgc cggccagctt
     2461 ccacgccgcc ccggcgctca cgcagactgc cgcgacgcac tccgccgctg ctgagccccc
     2521 gctgcaccgg acggccacgc ctgcgccggt tgcgcacgca gcgcccgcgc cagtggccca
     2581 cgcgagcgcc cctcgcccgg ctccagtgga tcacacccac gtcaaagcca tcaaggtttc
     2641 tctcgaggag gacgcgccgg ccgagcccgc cgcgcgccat acggctccga cgcatgcggc
     2701 gccgcctccc gaggcgcccg cgcccgtcgc aaccaagcca cagaagccgg agaaaccgca
     2761 gcccaaggcg accgacgcgc acgacggaga caatccgttg ctcgcggccg ttcgcggggc
     2821 cgtgcgttcg cgcccgccca agggcgaata actcggacta cggacggagc acgagcgctc
     2881 cctgaacggc gccgcgacgg agtcgctcga gcgcgtcgtt ggcgtggtcg agcgggagcg
     2941 tctcgacgtg cgtttgaagc ggggtcttcg cggcgatttc gaagaagcgc tcgccgtcgt
     3001 cgcgcgtgag gttcgcgacg gagcgcagca cgcgttcgcc ccagagtagc tcgtagggca
     3061 tggcggggat gtcgctcatg tggatgccgg cgcagacgac gacgccgccc ggtcgtacgg
     3121 cgcggagcgc gtgcggcacg agcgcgccga cgggcgcgaa caagagcgcg gcgtcgagcg
     3181 gctcgggcgc agggccgtcg gaagggccgg cccattcggc accgagcgaa cgcgcgaacg
     3241 actgcgccgc gtcgtctccg cggcgcgtga aagcgaacag gcgccggcct tcgaagcgcg
     3301 cgacttgcgc gacgatgtgc gcggccgcac cgaagccgta aatcccgagc gcccgtgcgt
     3361 cgctcgcggc gcggagcgca cggtagccga tgagcccggc gcacagcagc ggggcggcgt
     3421 gcgcgtcgtc gtacgccgcc gggattgcga agcaatagcg ttcatcggcc accgtgcgcg
     3481 ttgcgtagcc gccgtcgcgc gtgtagcccg tgaaacgacc gcgttcacag agattctcgc
     3541 gtcgcgcgcg gcactggacg cactccccgc aggtccacgc gagccacggc acgcctacgc
     3601 gcgcgcccag cggaaagcgc gccgcacctg cgccctgcgc gacgacggtg cccacgatct
     3661 cgtggccgag cacgagcggc agcttcggct gtgtcagctc gccatcgaag acgtgcaagt
     3721 ccgtgcgaca aacgccgcag gcgcgcacct ccagcaagag ctcgccgggg ccaggcgtcg
     3781 gctcaggaag ctccgttacg cggagcgcgg cgccgggacg ttcgaagagc agggcgtgca
     3841 tggcatctcc tgggcacgag cagggccgtt gatagacgcg gacggaacgg atcatacaac
     3901 gcagtgtgag gatgagctgc ccaccccgtc cgccctgcag gctcagcgcc gcggctcgac
     3961 cagccgcacg agcgtgccga tgacgcggtg aaagagcgcc gcgagctcgg gctcgacggg
     4021 cccgatgaag cccatggcct cggcgatttc caaacacgcg agcgtttccc gcgctgaagc
     4081 ggccgctgac tgaaagcgcg cctgccgatt cttgccccga ctgtaggcgc cctcggcgac
     4141 gttcaacgga acgctaatca gagcccgttc catctgatcc gcgagcaccg agctccgcgc
     4201 ccgcagcacc cgaacgagcg gcgcgagccg acgaacgagc tcgagaacga cgggataaat
     4261 cctgagcgac atgatgttcc tcctgtcccc gcccttcgag gaccccaaac ccccgcaggc
     4321 gcgcgcaggc c
//
LOCUS       DATIML010000153         2000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_610511, whole genome shotgun sequence.
ACCESSION   DATIML010000153 DATIML010000000
VERSION     DATIML010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_610511"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..448)
                     /locus_tag="VLJ38_02685"
     CDS             complement(<1..448)
                     /locus_tag="VLJ38_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HSU38437.1"
                     /translation="MTAADPTRNIETIVRLETPKLIAGLSRMLRDVGRAEELAQDALV
                     AALEHWPAEGTPDNPGAWLMATAKRRAIDWLRRQQRIERDHAALGREQDELVEARVAE
                     IEAAVDDDIGDDLLRLVFTACHPVLSTEARVALTLRLLGGLTTEEIA"
     gene            complement(589..1221)
                     /locus_tag="VLJ38_02690"
     CDS             complement(589..1221)
                     /locus_tag="VLJ38_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38438.1"
                     /translation="MSAPAVAASAPVVAASAPPPSPTATVASAPPTESARAEPATTAP
                     VPPPPADEGPSRSQKPLDIMTARDAAFLIDYANSDVKARAQAACAKELDAERNRACEE
                     KARDAFQGDVIRFKRGPDDKKDWAKTVSLVIYKRNGSALREVSVGTVELSEEGADGVR
                     VKLGKQKGARPLWRGQSSALIKAPNDYSIEFDDPEYGHLRYDAKIGLVTD"
     gene            complement(1412..1861)
                     /locus_tag="VLJ38_02695"
     CDS             complement(1412..1861)
                     /locus_tag="VLJ38_02695"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HSU38439.1"
                     /translation="MDASTIELLAASFARVAARRDDAATIFYARLFTGAPALRSLFNH
                     DLESQKAKFMSALAQIVEYYRIGVDPESYLARLAEHHDSYGAQRAHFETMGDALMFTL
                     AQVLHEHFTPEVRAAWVTAYGEVAAAMLRHGDVSPRSVRPRAASLRF"
BASE COUNT          314 a          648 c          710 g          328 t
ORIGIN      
        1 gcgcaatttc ttccgtcgtg aggccgccga gcaggcgcaa ggtgagcgca acgcgcgctt
       61 cggtcgagag gacggggtgg cacgccgtga agacgagacg caggaggtcg tcaccgatgt
      121 cgtcgtccac ggcggcctcg atttcagcga cgcgcgcttc gacgagctcg tcctgttcgc
      181 ggccgagcgc cgcgtgatcg cgttcgatgc gctgctggcg gcggagccag tcgatggcgc
      241 ggcgtttggc cgtcgccatg agccaggcgc cggggttgtc gggcgtgcct tccgccggcc
      301 agtgctcgag ggcggccacg agcgcgtcct gcgcgagctc ttcggcgcgg cccacgtcgc
      361 ggagcatgcg cgaaagtcct gcgatgagct tcggcgtctc gaggcggacg atggtttcga
      421 tgttgcgcgt cgggtcggct gccgtcacag gcgtcgatca gtacgagctt tggctcgagg
      481 tgcaacgaca tggcgaaacc tgggcctcgc ctagatgacg aacgacgacg gatcgtctcg
      541 acacgccgct cgcattattt cggcgcgtgt gggcccaggg gccggtgctc agtcggtgac
      601 gagcccgatt ttcgcgtcgt aacgcaaatg gccgtattcg gggtcgtcga attcgatgct
      661 gtagtcgttc ggcgccttga tcagcgcgct cgattggccg cgccagaggg gtcgggcgcc
      721 cttttgtttg ccgagcttca cacgcacacc gtctgcgccc tcttcgctga gctcgaccgt
      781 gccgacggag acttcacgca atgcggagcc gttgcgcttg taaatgacga gcgacaccgt
      841 cttcgcccaa tccttcttgt cgtcggggcc gcgtttgaag cgaatcacgt caccctgaaa
      901 tgcgtcgcgc gctttttcct cgcaggcgcg gttgcgctcg gcgtcgagct ctttcgcgca
      961 tgccgcttgc gcgcgcgcct tcacgtcgga gttcgcgtag tcgatgagga acgccgcgtc
     1021 gcgcgccgtc atgatgtcga gcggtttttg cgagcgcgac gggccctcgt cggcgggagg
     1081 cggcggcacg ggcgcggtgg tcgcgggttc cgctcgagcg ctctcagtcg gcggagcact
     1141 cgccaccgtc gcggtcgggc tcggtggcgg agcgctggcc gcaacgacgg gcgcgctcgc
     1201 cgcaacggca ggcgcgctca tggtggagag cgacggtcgg ggagcgggcg gaggtcgcgt
     1261 gccgcacgcc gcgagaacgc agacgagcgg gaggctccga aacacggctg cacgggcacg
     1321 ccggtgggtc gtcgggaaca tgcgccgcga gcatacccca accgctcacg cgcggcccga
     1381 cggcgcgaaa gcgcgaaagc gcgaaagcgc gtcagaagcg cagtgacgct gcgcgcggcc
     1441 gcaccgaacg cggcgaaacg tcaccatggc gcagcatggc ggccgcgact tccccgtacg
     1501 ccgtcaccca cgccgcgcga acttccgggg tgaaatgctc atgcagcacc tgagcgagcg
     1561 tgaacatgag cgcgtcgccc atcgtctcga agtgcgcgcg ttgcgcgccg tagctatcgt
     1621 gatgttcggc gagccgggcg agataactct ccggatcgac gccaatccgg tagtactcga
     1681 cgatctgcgc gagcgcgctc atgaacttcg ccttctgcga ctcgagatcg tggttgaaca
     1741 acgaccggag ggcgggcgcc ccagtgaaca gtcgcgcgta aaagatggtc gcagcgtcgt
     1801 cgcggcgtgc ggccacgcgc gcgaagctcg ccgccaaaag ctcgatcgtg cttgcgtcca
     1861 tgctgatgct gcggcccggc ccagggctgc cacggctcat acggcacacc cgcccgcgac
     1921 ttaatcagcc gccgtgagcg caggcgacaa agccaagcat cagcgcgagt tacacggacg
     1981 caaggcggcg tcggagctag
//
LOCUS       DATIML010000154         1684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2630668, whole genome shotgun sequence.
ACCESSION   DATIML010000154 DATIML010000000
VERSION     DATIML010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2630668"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..447)
                     /locus_tag="VLJ38_02700"
     CDS             complement(148..447)
                     /locus_tag="VLJ38_02700"
                     /inference="COORDINATES: protein motif:HMM:NF014461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmoB/DmpM family protein"
                     /protein_id="HSU38440.1"
                     /translation="MSAAGGQRPSPVGPVLEANEIGRAVAAAIVTTNPGASIEDRGAY
                     LRVSVLGRCVVERRAIETELGRDFTLPRDLELVMPAFQGRLSMNDDRVEWRFEGA"
     gene            complement(444..773)
                     /locus_tag="VLJ38_02705"
     CDS             complement(444..773)
                     /locus_tag="VLJ38_02705"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSU38441.1"
                     /translation="MMSFEAVLPDDELWAGEMRGLLVQGRRVLLVRTDGPVCAYADRC
                     AHLGVPLSQGKLEGGVITCSAHHYQYDARTGCGVNPESVRLEAFPVRIEAGQIEVDVA
                     ATLEASA"
     gene            complement(770..1024)
                     /locus_tag="VLJ38_02710"
     CDS             complement(770..1024)
                     /locus_tag="VLJ38_02710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="toluene-4-monooxygenase system B family protein"
                     /protein_id="HSU38442.1"
                     /translation="MTSDAPIPVYGFVRGDTLGLLVLVRPSDSVATLTLTLTEAASVR
                     VAPSRGARLFAGERELDPHASVAAAGLTPLARVDLVPGAE"
     gene            complement(1021..>1684)
                     /locus_tag="VLJ38_02715"
     CDS             complement(1021..>1684)
                     /locus_tag="VLJ38_02715"
                     /inference="COORDINATES: protein motif:HMM:NF016811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HSU38443.1"
                     /translation="YLTPLAQRKNSFREFMQEWVLDQFERTLRDHGLERPWYWNEFER
                     SLGYYHHQVYASAYSYRATVWFDLPLPSPAERAWLAEKYPESWADFAPIWERVSDRWR
                     ASGPDIEWYSHGVTPVGFCSLCQLVLAAGTPRENSACVRDHGGRRYIFCSAPCAWIFE
                     REPERYAAHRTIVDRILDGEAPANLIALVRDYMGLNEATWGKDSARGHYPWLGPSVEG
                     AK"
BASE COUNT          274 a          573 c          575 g          262 t
ORIGIN      
        1 cggtttgata ttggcgatac caagcgctga cgggcgtttc gacctcgaag ccgcgctccg
       61 ggtagtagag gagacgcgag gtgccgattt catagggggt gggcacgcgt tgccgcccct
      121 cgagatgcca atacgtgcgg cgcgcgttca tgctccctcg aagcgccatt cgacgcgatc
      181 gtcgttcatc gacagacgac cctgaaacgc cggcatcacg agctcgaggt cgcgcggcag
      241 cgtgaagtcg cggccgagct ccgtctcgat ggcgcgccgc tcgacgacgc agcgtcccag
      301 tacggacacg cgcaggtacg cgccgcgatc ctcgatgctc gcgccggggt tcgtcgtcac
      361 gatcgcggcc gcgacggcac ggccgatttc gttggcttcg agcaccggtc ccaccgggct
      421 cggccgctgt cccccggccg cactcatgcc gaagcctcca gcgtcgctgc cacgtccact
      481 tcgatctggc cggcttcgat ccgcaccgga aacgcctcca ggcgcacgct ctcggggttg
      541 acgccgcagc cggtgcgcgc gtcgtattgg taatggtggg ccgagcaggt gatgacgccg
      601 ccttccagct tgccttggct gagcggaacg ccgaggtgcg cgcagcgatc ggcgtacgcg
      661 cagaccgggc cgtccgtgcg cacgagcagg acgcggcgcc cctgcaccaa gagcccgcgc
      721 atctcgccgg cccagagctc gtcgtccggc aataccgctt cgaacgacat cattcggctc
      781 ccgggacgag atcgacgcga gcgagcggcg tcaggcccgc cgccgccacg ctcgcgtgcg
      841 ggtcgagctc tcgctcgccg gcgaagaggc gcgcgccccg cgacggagcg acgcgcacgg
      901 aggcggcttc cgtcagcgtg agcgtcaggg tcgcgacgct gtcgctcggc cgcacgagga
      961 cgagtaaacc gagcgtgtcg ccgcgcacga agccgtaaac ggggatggga gcgtcgctcg
     1021 tcacttggcg ccttctacgg acgggccgag ccacgggtaa tggccccgcg cgctgtcttt
     1081 gccccacgtc gcttcgttca agcccatgta gtcgcggacc agggcgatca ggttcgcggg
     1141 ggcctccccg tcgagaatgc gatcgacgat ggtacggtgt gccgcgtaac gctccggctc
     1201 gcgctcgaag atccaagcgc agggcgcgct acagaagata tagcggcgac cgccgtggtc
     1261 gcgcacgcac gcggagtttt cgcgcggcgt gccggccgcg agcacgagct ggcacagcga
     1321 gcagaaccca acgggcgtga cgccgtgcga gtaccattcg atgtccggcc ccgacgcgcg
     1381 ccagcgatca ctcacgcgct cccaaattgg cgcgaaatcg gcccagcttt cggggtattt
     1441 ttccgcgagc caggcgcgct cggcggggct cggcagcggc agatcgaacc acaccgtcgc
     1501 gcgatacgag taggcgctcg cgtagacttg atggtgataa tagccgaggc tccgctcgaa
     1561 ttcgttccag taccagggac gctcgaggcc gtggtcgcgg agcgtgcgct cgaattggtc
     1621 gagcacccac tcttgcatga actcgcgaaa cgaatttttg cgctgcgcga gcggcgtcaa
     1681 gtag
//
LOCUS       DATIML010000155         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1476085, whole genome shotgun sequence.
ACCESSION   DATIML010000155 DATIML010000000
VERSION     DATIML010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1476085"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            308..1705
                     /locus_tag="VLJ38_02720"
     CDS             308..1705
                     /locus_tag="VLJ38_02720"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU38444.1"
                     /translation="MQSDGIHSTWGGRHRSKATVLVVEDDDDTRAALADTLTDLGHSI
                     EVRADGVAALERLGNADFDAVLTDVRMPRMDGIELCRRLSGDRPSLPVLVMTAFGDVD
                     SAMGALRAGAYDFITKPLTIERLADALDRALNQGPRSPIVVRPCPPHAFEEPLDGLVG
                     SSPAMRALGDRIRSAAPTESTVLITGESGTGKELVARALHRHSLRADGPFVPVSCAAV
                     PAEMLEAELFGHTRGAFTGAGQARVGLLQQAEGGTIFLDEIGDMPLELQPRLLRALQE
                     RRVRPVGSSVEFDFDARVIAATNRDLSVAMAAGTFREDLYFRVNVIRLEVPPLRERPG
                     DVLELARYFLARASAGTNESYQLTPEAEHQLLSHDWPGNVRELENSMRAAVAMATSGN
                     VGFEELPTGVRSGLGTRDSGADPRTLDEVERRHILHVLDALDWNKAEAARVLGINRAT
                     LYRKLQRYGLEGPGN"
BASE COUNT          287 a          619 c          607 g          261 t
ORIGIN      
        1 agagcgtgag cacgaagacg gcaaagaaaa gggctgcgcc ccaggccgta cgtttggtgc
       61 gcaggaaacc cgacatgccg cgtctcgatt cggtacggct cgcgtcgccc ggcgattaag
      121 ccagttctcg cgcccggaaa aggccgtccc cgggcgaatt ccgtctctgc ggtcgcgagc
      181 cacgaaacga gcggggtttc gcgccgaggt ggtccgccgt gacgcttcgc cccgggctcg
      241 cggttgcccg ttaccgcctg aacgctgttg ccctggagcc gtacaggatg cagagttcgt
      301 ggaagagatg cagagcgacg gcatccacag cacctggggc gggcggcatc gcagcaaagc
      361 caccgttctc gtcgtcgaag acgacgacga cacgcgcgcc gcgctcgcgg acacgctcac
      421 cgatctcggc cactccatcg aggtgcgggc ggacggcgtc gcggcgctcg agcgcctcgg
      481 caacgcggat ttcgatgcgg tgctcacgga cgtgcgcatg ccgcgcatgg atggcatcga
      541 gctctgccgg cggctgagcg gcgatcgtcc gagcctgccc gtgctcgtga tgaccgcctt
      601 cggcgacgtc gattcggcca tgggggccct tcgggcgggc gcctacgact tcatcaccaa
      661 accgctgacc atcgaacgcc tggcggacgc gctcgatcgc gccctcaacc aggggccgcg
      721 cagccccatc gtcgtgcgac cgtgcccgcc gcacgcgttc gaagagccgc tcgacggcct
      781 cgtcgggtcg agcccagcca tgcgcgcgct tggcgatcgg attcgctccg cggcgccgac
      841 cgaatccacc gtgctcatca cgggcgagag cggcacgggc aaggagctcg tcgcgcgcgc
      901 gcttcatcgc cacagcttgc gcgcggacgg gccgttcgta cccgtgagct gcgcagccgt
      961 cccggcggaa atgctcgaag ccgaactgtt cggccacacg cgcggagcgt tcacgggcgc
     1021 agggcaggcg cgcgtcgggc tgttacaaca ggcggagggc ggcacgatct tcctcgacga
     1081 aatcggggac atgccgctcg agctccagcc gcggctcttg cgcgcgctgc aggagcgacg
     1141 cgtgcgcccg gtgggttcgt ccgtggagtt cgacttcgac gcccgcgtca tcgccgcgac
     1201 caaccgtgat ctctccgtgg cgatggccgc cggcaccttc cgggaagacc tgtacttccg
     1261 cgtgaacgtg attcggctcg aggtgccccc gctgcgggaa cgacctggcg acgtgctcga
     1321 gctcgctcgc tatttcctcg cgcgcgcgag cgccggcacg aacgaaagct accagctcac
     1381 gcccgaagcc gagcaccagc tcctctcgca cgactggccc ggcaacgtgc gcgagctcga
     1441 aaattccatg cgcgcggccg tcgcgatggc aacgtccggg aacgtcggct tcgaagagct
     1501 gccgacgggc gtgcgctcgg ggctcggcac gcgtgattcg ggcgccgatc cgaggacact
     1561 cgacgaggtc gaacggcggc acatcctgca cgtgctcgac gccctcgatt ggaacaaggc
     1621 cgaagcagcc cgcgtgctcg ggatcaatcg cgcgacgctc taccgcaagc ttcagcgcta
     1681 cggcctcgaa ggccccggaa actgaagctc agccgggaac tgaagctcag ccgggaatgg
     1741 agtcttcgcg cgtgcgcggc gggggctcgc tgcc
//
LOCUS       DATIML010000156         1594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4074308, whole genome shotgun sequence.
ACCESSION   DATIML010000156 DATIML010000000
VERSION     DATIML010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4074308"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VLJ38_02725"
     CDS             complement(<1..681)
                     /locus_tag="VLJ38_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38445.1"
                     /translation="MQSPETEDRWYVDVGGTPKIMTLDQIVEAFEGGVINAKTLVTEV
                     GGSEWKPLKEVADLGDDEEAAAPSAQAPGAAYSVAPSPVTVPPLAAARSNQQPPAARA
                     TLSAWPPVVASAKPTAFAAPSPSIPPGNSPSIAPSGAFPSLAPVSTAPMVQDLGLSLD
                     ADFKPRKSKAGYVAAVVVVLFVGGLIGVGRLTGGGEITRPIPVPAAAPVALNTATSNA
                     LTTTTSSPA"
     gene            952..1494
                     /locus_tag="VLJ38_02730"
     CDS             952..1494
                     /locus_tag="VLJ38_02730"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HSU38446.1"
                     /translation="MKLKTRTIERLRDALLESGRRPSVVVSSAYETLTREGLLSPAEI
                     AALNRVDPLAETMFLMMAADGKLTSAERDAVRGGIRGLTDDVLRTGTINVMLDNYQRR
                     LESDGRDERLRQIAETIAEEPSEAESAFALAAAIALADDDVAEEENAFINQLASWFSI
                     EPDRAGIILDQIEHDADDAK"
BASE COUNT          292 a          512 c          543 g          247 t
ORIGIN      
        1 ggcgggggac gacgtcgtcg tcgtgagcgc attgctcgtt gcggtattga gcgcgacggg
       61 tgcggctgcg ggcacgggga tgggccgcgt gatttcgccg ccacccgtga gccggccgac
      121 gccgatgagc ccgccgacga acagcacgac gaccactgcc gccacgtagc cggccttgct
      181 cttacgcggc ttgaaatccg catcgagcga gagacccagg tcctgaacca tcggggcggt
      241 gctcacgggc gcgagcgacg ggaacgcgcc cgagggcgcg atggatggcg agtttccagg
      301 cggaatcgac gggctcggag ccgcgaacgc agtcggcttc gcactcgcga ccacgggcgg
      361 ccacgcgctc agcgttgcac gagccgccgg cggctgctgg ttcgaccgag cggcggccag
      421 gggcggcacc gtgacgggag acggcgcgac ggaatacgca gcacccggcg cctgcgcgct
      481 cggagccgcc gcttcctcgt cgtcacccag atctgcaact tccttgagcg gtttccactc
      541 cgaacccccg acctcggtga ccagagtctt tgcgttgatc acaccgcctt cgaacgcttc
      601 gacgatctgg tcgagcgtca tgatcttggg cgtgccaccc acatccacgt accagcggtc
      661 ctcggtctcg gggctttgca tgcgattggc ctccagggtg cgagcttgtg tgctcgctcg
      721 gtgtgacgtt cgagtttagc ttcggatggc gaatggcgcg agccctgacg ctgagaaaca
      781 ccatgaaatg cgcgggcttt cgctgcaaag tggtagcttc acggtagaaa tacgcgctcg
      841 tctaaatcca tccgcggccg attgccccta ggagcggtcg ggggcgaacg gataggctcg
      901 aggttcggcg acgatttttt tcatacgcca ccgagtcagg gagtcaggga cgtgaagctc
      961 aagacgcgaa ccatcgaacg cctgcgcgac gccctgctcg aaagtggcag gcgcccgagc
     1021 gtggtcgtct cttccgcgta cgagacgctc actcgtgaag ggctgctctc cccggcagag
     1081 atcgcggcgc taaaccgcgt ggatccgctc gccgaaacga tgttcttgat gatggcggcc
     1141 gacggcaagc tcacgagcgc ggagcgggac gccgtgcgcg gcggcattcg gggcctgacc
     1201 gacgacgtgc tccggacggg cacgatcaac gtgatgctcg acaactatca gcgaagactc
     1261 gagagcgacg gtcgcgacga gcggctccga caaatcgcag aaaccatcgc cgaagagccg
     1321 agcgaagccg aaagcgcgtt tgcgctcgcc gccgcgatcg cgctcgccga cgacgacgtc
     1381 gcggaagaag aaaacgcgtt catcaaccag ctcgcgagct ggttctcgat cgagccggat
     1441 cgcgcgggca tcatcctcga ccaaatcgag cacgacgcgg acgacgccaa gtagagcgag
     1501 gtccgccgaa agcctcgtac cgaacgcgac ggcgcgcgac gttcggcggg tcgtgtcagc
     1561 gcgtccgagg ttcgagcggg aaacagccgc gcgc
//
LOCUS       DATIML010000157         5361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2341672, whole genome shotgun sequence.
ACCESSION   DATIML010000157 DATIML010000000
VERSION     DATIML010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5361
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2341672"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..336
                     /locus_tag="VLJ38_02735"
     CDS             91..336
                     /locus_tag="VLJ38_02735"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU38447.1"
                     /translation="MGLGQAEQDEDPARGRGGGSGGRVLFVDDNDDVRKSFRRMLVAA
                     GYSVREAANGIEATALVGTEELDLVISDVHMPDMDGV"
     gene            349..1548
                     /locus_tag="VLJ38_02740"
     CDS             349..1548
                     /locus_tag="VLJ38_02740"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU38448.1"
                     /translation="MHETDPDLPVLLLSGDPDLQSAMRAVEYGAVEYLEKPVELEKFQ
                     ASVRRALGVRRQRLEAREAVALRSGKQAQRATLDTHALEGARLAGRYRVGSLIGSGGM
                     GSVYEGTREDLGGMPVALKVLHPGISQDVDVLRRFRREAHVVAAINHPNIVRVLDFHM
                     PTDEEPAFIVMERLEGASLGDAIRRARQFSVDDVAWIAVQVLAGLAAAHGANVIHRDL
                     KPDNVFLTELPRVSDVVKLLDFGVAKLTESPWDEHLTQTGVVMGTPAYMAPEQARGES
                     ADARSDLYAVGCLIFEALTGRPPFIANNYNAVMFQINQTTPPSLAELRPDLDPQFCAV
                     IKQSMEKDLDARLQTARIFAEALAPWVAHAPASGERRTESSPAVNSTIRPPVAARPTP
                     SRQTKAR"
     gene            complement(1556..3607)
                     /locus_tag="VLJ38_02745"
     CDS             complement(1556..3607)
                     /locus_tag="VLJ38_02745"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU38449.1"
                     /translation="MSDDHRLNAGKGLAERVFHQLVDSIPDYAIVILDPTGHIASWNL
                     GAQRIKGYEPNEIIGRHFSVFYTPEDIANGKPTRILETVRQNGHVEHESWRVRKDGTR
                     FWGNVVLTALKEPNGEIMGFAKVTRDLTLQKLADEELRRSEERFRLLVDSVTDYAIYM
                     LDPEGRVTTWNSGAERMTGYKAEEVIGQHFSRFFTAEDARLGRPLAELASAERTGRFD
                     DEAVRVKRDGTQFWANVTLTSIRGAHGELIGFAKVIRDLTARRAAEETERRLLAEQVA
                     RSASQESEARLKEAVARADAANRLKDEFLATVSHELRTPLNAIVGWSSLLRARTDEPA
                     LSKGLASIHQNALAQSHLIEDILDVSRVITGKLRLHLTAADPVNIVNEAMDVIRPSAD
                     AKHLHLQFSPPEEPIVLLADVDRVRQIVWNLLSNAVKFTEAGGEVAISVQRAGSNLEL
                     LVRDNGRGIEANFLPHVFDRFRQEDSTTTRRFGGLGLGLAIVRHITELHGGEVAVESA
                     GIGKGALFRVTLPIRPMAVEVHDRVTPSEPVRSSTSPRQAALAGLRVLIVDDDLDARE
                     VLEDALTSAGSSVKTADSAARGLELVRSFRPNVILSDVGMPDQDGYAFMRHVRELGAR
                     QGGDVPSIALTGYTRHGDRTQAIAAGFTAHVAKPVVPDELLKLVASLALDARRQEASS
                     E"
     gene            3755..>5361
                     /locus_tag="VLJ38_02750"
     CDS             3755..>5361
                     /locus_tag="VLJ38_02750"
                     /inference="COORDINATES: protein motif:HMM:NF024306.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSU38450.1"
                     /translation="MTIPALNERSAAPSREQLVHLLYEAAELEHNLMCTYLYAAFSLR
                     QGEAEGLSADEARAVASWRKVIVKVAVEEMAHLAAVWNITAALGAAPRFGRGNFPLDP
                     GALPAGIVVKLAPFGEGVLQHFIYLERPSTSKEAEGPGFESSLAFKRTDQRIRLVPMP
                     LDYDTVGGFYESLDERLRAFVEQVGERAAFCGDAALQLSPIETGLSAVQPVVCRKTAS
                     QAFAAIVAQGEGAPEHADDSHFWRFAAIREELRALRAKNPDFAPAFPAAVNPVLRPPL
                     RATGRVWLEDERAAATVDLANSAYALMLRLLAYSYAVPRPSPEKALAVELSLGLMRAV
                     TALGERAARLPAGPSNPGCHAGMSFTSLRDAAALPHGTSSARFFRERLREIAAAAVEL
                     DVQGDERTTTARRVLSELAERAERRFEAAERATAVVPKSLPIVPSDAPASPPPSGAPP
                     IPLRVNGVDEIEGNELTLLYEGKKCIHSRFCVTWGPRVFLANVEGPWIHPDAMDVEAL
                     TEIAHVCPSGAIRYRRKDGKAEEGPPPV"
BASE COUNT          844 a         1765 c         1836 g          916 t
ORIGIN      
        1 cgtccgtgtc tcctacactg tcctacaaaa cgccgggggc ccggcgtgct ggggatggat
       61 ccacggagtg ggcggcctag gctacttggc atggggctcg gccaagcgga acaggacgag
      121 gatcccgctc gtggtcgtgg cggcggttcg ggcgggcgtg ttttattcgt cgacgacaac
      181 gacgacgtga ggaagagctt ccggcgcatg ctcgtggccg ccggttacag cgtgcgcgag
      241 gccgcgaacg gtatcgaggc gacggcactc gtgggaacgg aggagctcga tctggtcatc
      301 agcgacgtgc acatgcccga catggacggc gtctagctct tgaagcgcgt gcacgagacc
      361 gaccccgacc tgcccgtcct gttgctctcc ggcgatccgg atttgcagtc cgcgatgcgg
      421 gccgtcgaat acggcgccgt cgagtatctg gagaagccgg tcgagctcga gaaattccag
      481 gcgagcgtcc ggcgagcgct cggcgttcgg cgccagcgct tggaggcgcg ggaagcggtg
      541 gcgctgcgct cgggcaagca ggcgcagcgg gcgacgctcg acacgcacgc gctcgagggt
      601 gcaaggcttg cgggccgcta ccgggtcggc tcgctgatcg ggtcgggcgg catgggttcg
      661 gtgtacgagg ggacgcgcga ggacctcggc gggatgcccg tggctctcaa ggtgctgcac
      721 cccggcatca gccaggatgt cgatgtcctc cgacgttttc gccgggaagc gcatgtggtc
      781 gccgccatca accacccgaa catcgtgcgc gttctcgatt ttcacatgcc gacggacgag
      841 gagcccgcgt tcatcgtgat ggagcgactc gagggcgcct ccctgggtga cgccatccgc
      901 agggctcgcc agttctccgt cgacgacgtg gcctggatcg ccgtgcaggt gctcgctggg
      961 ctggctgcgg cccacggcgc gaacgtcatc caccgcgact tgaagccgga caacgtcttc
     1021 ctcacggagc tcccgcgcgt ctccgacgtc gtgaagctgc tcgacttcgg cgtcgccaag
     1081 ctcaccgagt cgccctggga cgaacacctg acgcaaacgg gggtggtgat gggcacgccc
     1141 gcctacatgg cgcccgagca ggcgcgcggc gagagcgccg acgcgcggag cgatctgtac
     1201 gccgtgggct gcttgatctt cgaggcactg acgggcaggc cgccgttcat cgcgaacaac
     1261 tacaatgcgg tcatgtttca gatcaaccag accacaccgc cctcgctcgc tgagctccgg
     1321 cccgatctgg acccgcagtt ttgcgccgtc atcaagcagt cgatggagaa ggacctcgac
     1381 gcgcgcttgc agaccgcgag aattttcgcc gaagcgctgg cgccctgggt cgcacacgcg
     1441 cccgcctcgg gcgagcgccg caccgaaagc tcacccgcgg tcaattccac gattcgtccg
     1501 cccgtcgccg cgcgaccgac gccgagtcga cagactaaag cgcgctagtc ctgcttcatt
     1561 cggacgaagc ttcttgccga cgcgcgtcga gggcgaggct ggcgacgagc ttcaagagct
     1621 cgtcgggcac gacgggcttg gcgacgtgcg ccgtgaagcc ggcggcgatc gcttgcgtgc
     1681 ggtcgccgtg tcgcgtgtac cccgtgagtg cgatcgacgg tacgtcgccg ccctgccgcg
     1741 ctccgagctc gcgcacgtgg cgcatgaacg cgtagccgtc ttggtcgggc attccgacgt
     1801 cgctcaggat gacgttcggc cggaagctac ggacgagctc gaggcccctt gcggccgagt
     1861 cggcggtctt cacgctcgag cccgccgagg tcagcgcgtc ctcgagtact tcgcgcgcgt
     1921 ccaagtcgtc gtcgacgatg agtacgcgta agcccgcaag ggccgcttgg cgtggcgatg
     1981 tgctggagcg caccggctcg ctcggggtca cgcgatcgtg gacctcgacg gccatgggac
     2041 ggatcggcag cgtgacgcgg aacagcgcgc ccttgccgat gccggcgctt tcgaccgcga
     2101 cttcgccgcc gtggagctcg gtgatgtggc ggacgatcgc gagaccgagc ccgagtccgc
     2161 cgaagcggcg cgtggtcgtg ctgtcctcct ggcggaagcg gtcgaacacg tgcggcaaga
     2221 aattggcttc gatgccgcgc ccattgtcgc gtacgaggag ctccaagttc gagccggcgc
     2281 gctggacgga gatcgcgacc tcgccgcccg cttccgtgaa tttcacggcg ttcgacaaga
     2341 gattccacac gatctgacgc acgcggtcga catcggccaa aagcacgatg ggctcctccg
     2401 gcggcgaaaa ctgcaaatgc aggtgctttg cgtcggccga aggtcgaatc acgtccatgg
     2461 cttcattgac gatgttgacg gggtccgcag ccgtgagatg tagccggagc ttgccggtga
     2521 tgacgcggga cacgtcgagg atgtcctcga tcaggtgcga ttgcgcgagc gcgttctggt
     2581 gaatcgaagc gaggcccttc gagagcgcgg gttcgtccgt gcgcgcgcgc agtagcgagg
     2641 accagcccac gatcgcgttc agcggcgtgc gcagctcgtg cgacaccgtc gcgaggaatt
     2701 cgtctttgag acggttggca gcgtcggctc gtgccacggc ttccttgagc cgagcttcac
     2761 tttcctgcga cgcggagcga gcgacctgtt cggcgagcag ccggcgctcc gtctcctcgg
     2821 ccgcgcgccg cgccgtcaga tcacgaatga ccttggcgaa gccgatgagc tcgccgtgcg
     2881 ccccgcgaat ggacgtgagg gtcacgttgg cccaaaactg ggtgccgtcg cgcttgaccc
     2941 gtacggcttc gtcgtcgaaa cgtcccgtgc gctccgcgct ggcgagctcg gcgagcggcc
     3001 ggccgagacg cgcgtcctcg gctgtgaaga agcggctgaa atgctggccg atgacctcct
     3061 cggccttgta gccagtcatg cgctcagcgc ccgagttcca ggtcgtgacg cgaccttcag
     3121 gatcgagcat gtagatggcg tagtcggtga cgctgtccac gaggagccga aagcgttcct
     3181 ccgagcggcg gagctcctcg tcggcgagct tctgcagcgt cagatcgcgc gttaccttgg
     3241 cgaagcccat gatctcaccg ttcggctcct tgagcgcggt gagcacgaca ttgccccaga
     3301 aacgcgtgcc gtccttgcgg acgcgccagc tttcgtgttc gacgtgacca ttttgacgca
     3361 ccgtctcgag gatgcgcgtc ggctttccgt tcgcgatgtc ctcgggcgta tagaagacgg
     3421 agaagtgacg gccgatgatt tcgttgggct cgtagccctt gatgcgctgc gcgccgaggt
     3481 tccagctcgc aatgtggccc gtaggatcga ggataacgat ggcgtagtcc gggatcgaat
     3541 cgacgagctg gtggaagacg cgctccgcca gtcccttccc ggcattcaac ctatggtcat
     3601 ccgacatgtg cctacactat gcattctgca tgcctggaaa agggtccgac attcttgcct
     3661 cagccagtgc aaattcgcgg tgttgcgcgc gcgccattgg ggcggacggg ccctgcccgt
     3721 ccagcggggc tagtgagctg aactgaaggg caccatgacc attcccgctt tgaacgagcg
     3781 ctccgcagcg ccgagccgcg aacagctcgt gcacctcttg tacgaggctg ccgagctcga
     3841 acacaacctc atgtgtacgt acctgtacgc ggcgttcagc ctgcggcagg gagaagcgga
     3901 ggggctcagc gcggacgagg cccgcgccgt cgcgtcttgg cgcaaggtca tcgtgaaggt
     3961 cgccgtcgag gagatggcac acctcgctgc ggtttggaac attaccgcgg cgctcggcgc
     4021 agcgccgcgc ttcgggcgcg gcaactttcc gcttgaccct ggcgcgctgc cggcaggcat
     4081 cgtcgtcaag ctcgcgccct tcggtgaggg cgttctgcag cacttcatct acctcgagcg
     4141 tccctcgacc tcgaaggaag cggaggggcc gggttttgaa tcgtcactcg cgttcaagcg
     4201 tacggaccag cgcatccgac tcgtgccgat gccgctcgac tacgacacgg tgggcggctt
     4261 ttacgagtcg ctcgacgagc ggctgcgggc cttcgtcgag caggtcggcg aacgcgccgc
     4321 attttgcggc gacgcggcgc tccagctctc gccgatcgag acggggctca gcgccgtaca
     4381 gcccgtggtc tgcagaaaga ccgcgagcca ggcgttcgca gccatcgtcg ctcaggggga
     4441 aggcgcgccg gagcacgccg atgattcgca cttctggcgc ttcgcggcta tccgcgagga
     4501 gttgcgtgct ctgcgcgcga agaacccgga ttttgcgcct gccttccctg cggcggtcaa
     4561 tcccgtgctc cgcccgccgc tgcgggcgac ggggcgcgtc tggctcgaag acgaacgcgc
     4621 cgccgcgacg gtcgacctgg cgaacagcgc gtacgcgctc atgctgcggt tgctcgcgta
     4681 ctcgtacgcc gtgccgcggc cgtcgcccga gaaggcactc gcggtcgagc tctcgctcgg
     4741 cttgatgcga gccgtgacgg cgctcggtga acgagccgcg cgcctgcccg cggggccgtc
     4801 caatcccggc tgccacgcgg gcatgtcgtt cactagcctg cgcgacgccg cggcgctgcc
     4861 gcacgggacg agctccgcac gcttctttcg tgagcgcttg cgcgagatcg cggccgctgc
     4921 cgtcgagctc gacgtgcagg gtgacgagcg caccacgacg gcgcgccgcg tgctgagtga
     4981 gctcgccgaa cgcgccgagc ggcgcttcga agcggccgag cgtgcgaccg ccgtcgtacc
     5041 gaaatccttg ccgatcgtcc cgtccgatgc gccagcatcg ccgccgccgt ccggcgcgcc
     5101 gccgatacct ctccgcgtca acggcgtcga cgagatcgag ggcaacgagc tcaccctgct
     5161 ctacgagggc aaaaagtgca ttcactctcg cttctgcgtc acgtggggac cgcgcgtctt
     5221 cctcgccaac gtcgaaggtc cttggattca cccggacgcg atggacgtcg aagcgctgac
     5281 cgagatcgcg cacgtgtgtc cttcgggcgc gattcgctac cgccgcaaag acggcaaggc
     5341 cgaggagggg ccgccgcccg t
//
LOCUS       DATIML010000158         3374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_32831, whole genome shotgun sequence.
ACCESSION   DATIML010000158 DATIML010000000
VERSION     DATIML010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3374
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32831"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..944)
                     /locus_tag="VLJ38_02755"
     CDS             complement(<1..944)
                     /locus_tag="VLJ38_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HSU38451.1"
                     /translation="MRLDRLTSKSQEALRAAVDLATKRGNPELIPEHLLVAVLEQEGG
                     IGRALVERAGASPAELVRELTARVDTLPRVAGGAEPSFGRRTTPLLSNAENEAKRMKD
                     DYVSVEHFLLAAAHSDKDIQAIFDRHGLAYDKLVRTLAEIRGSHRVTDQEPEGKFQAL
                     EKYTRDLTALAQRGKIDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIAEGI
                     AHRIASGDVPESLKQKRILALDLASLVAGAKFRGEFEERLKAVLKEVEGSAGQVILFI
                     DELHTVVGAGAAAGSIDASNMLKPGLSRGDMQMVGATT"
     gene            complement(1016..1582)
                     /locus_tag="VLJ38_02760"
     CDS             complement(1016..1582)
                     /locus_tag="VLJ38_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38452.1"
                     /translation="MTPSRLFARSVVLALVLVAPLLAASCGGSSTEKPSPSSAGMSSG
                     GSAGAAVKPDPITCGTETCKPLSLSFDPKYVPPCCTPDGACGLDSTPLAQFGFVFDEV
                     CQATNQPGDADAACPPSPELMIPSGGVTIMAPGFPGCCRAETHTCGYLMNKFGGILPL
                     DPPLGCVDSAPFLDGGAPSPCGAGGASN"
     gene            complement(1673..2041)
                     /locus_tag="VLJ38_02765"
     CDS             complement(1673..2041)
                     /locus_tag="VLJ38_02765"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU38453.1"
                     /translation="MSSRRTTKKIGRLIRLARMNTGLTQKDLAAKLGVRSGSYVGMLE
                     SGLCKGVGIGRLREIASHLDVHGVDCYRWMAAAGHLPTPLLSALMRSPERWDEVTDLL
                     GQQPRSSQAPRSRRRMARSA"
     gene            complement(2347..>3374)
                     /locus_tag="VLJ38_02770"
     CDS             complement(2347..>3374)
                     /locus_tag="VLJ38_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HSU38454.1"
                     /translation="QEVATLISALGCGIDESGNFELSKLRYHKVVLMTDADVDGSHIR
                     TLLLTFFYRQMREVIERGYLFIAQPPLYGVRKGKRHFYQKDQAALDRFLIENGIEGLT
                     LQSSKGPTLSGMVLFNLATRLRALHDTLQKIDTRCDARVVAALFRVGGMSLADFRDRA
                     KVDAAAEKLKTELSNRYPDLTPLTVTVEWEKQHGAGRIVVKFRPGASSRPATVDWELA
                     ESAEYQELLSIDEDVRSIGPAPYTVRVGEEQGQILPDAESLQAFITERGRKGMQITRY
                     KGLGEMNADQLWDTTMSPDARTLLQVRVNDPVRADELFSVLMGDQVEPRRQFIEENAL
                     NVRNLDI"
BASE COUNT          578 a         1105 c         1087 g          604 t
ORIGIN      
        1 atcgtcgtgg cgccaaccat ctgcatatcg ccgcgcgata gccccggctt gagcatattc
       61 gaggcgtcga tcgagccggc cgctgcaccc gcgccaacca ctgtatgcag ctcgtcgatg
      121 aatagaatca cctgccccgc cgagccttcg acctctttca ggacggcctt caagcgctcc
      181 tcgaactcgc cgcggaattt ggccccggcg acgagactcg cgagatcgag cgcgagaatg
      241 cgcttttgct tgagcgactc cggcacgtcg ccgctcgcga tgcgatgcgc gatgccctcg
      301 gcgatggccg tcttgccgac gccgggctcg ccgatgagca cgggattgtt cttcgtgcgt
      361 cgcgagagca cttgcatcac gcgccggatc tcctcgtcgc ggccgatgac cggatcgatc
      421 ttcccgcgtt gcgccaacgc cgtgaggtcg cgcgtgtact tctcgagcgc ttgaaacttg
      481 ccttccggct cctggtcggt gacgcggtgg ctgccgcgga tctcggcgag cgtgcgcacg
      541 agcttgtcgt aggcaagccc atgccggtcg aaaatggcct ggatgtcctt gtcggagtgc
      601 gccgcggcga gcaggaaatg ctcgaccgag acgtagtcat ccttcatccg cttcgcttcg
      661 ttctcggcgt tcgagagtag cggcgtcgtg cgccgtccga agctcggctc ggcacccccc
      721 gccacgcgcg gcaacgtatc gacgcgcgcc gtgagctccc gcacgagctc ggcggggctc
      781 gcgccggcac gttcgacgag agcgcggccg atgccgccct cttgctcgag gacggcgacg
      841 agcaggtgct ccgggatcag ctctgggtta ccgcgcttgg tcgcgagatc gacggcggcg
      901 cgcagtgctt cttggctttt ggaggtgagt cgatcgagac gcatggctct tggggcgcgg
      961 cgaattgccg cgcgagagcc aacctaagtc ggcctagaag cggatcaagg gcgccttagt
     1021 tgctcgcgcc gcccgctccg cacgggctcg gcgcaccgcc gtcgagaaac ggcgcggagt
     1081 ccacgcagcc gagcggcgga tccagcggca ggatgccccc gaatttgttc atcagatagc
     1141 cgcaggtgtg cgtctcggct cgacagcagc cggggaagcc cggcgccatg atcgtgacgc
     1201 cgcccgacgg gatcatgagc tcggggctcg ggggacacgc cgcgtccgcg tcaccgggct
     1261 ggttcgtcgc ctggcagacc tcgtcgaaca cgaaaccgaa ctgcgcgagc ggcgtcgaat
     1321 cgagcccgca cgcgccatct ggcgtgcaac acggtgggac gtacttcgga tcgaagctca
     1381 gcgagagcgg cttacacgtc tcggtgccgc acgtgatggg atcgggcttc accgcggcgc
     1441 ccgccgaacc accgctcgac atgcccgcgg acgagggcga gggcttctcg gtgctcgagc
     1501 cgccgcaact tgccgcgagc agcggtgcga ccaacacgag cgcgagcacg accgagcgag
     1561 cgaagagccg agatggcgtc attcgccgca tgaaaacacg aacccctgag cgcggccacc
     1621 tcgtcggcag tcgcgcattt atcccgccct cttccgaccc tcgcctaacg agctaggccg
     1681 agcgagccat cctccggcgg gagcgcggag cctgcgacga tctcggctgc tggccgagta
     1741 aatccgtcac ctcgtcccag cgctccggtg agcgcatgag cgccgacaac aggggtgtcg
     1801 gcaaatgtcc cgcggccgcc atccagcgat agcaatcgac tccgtggaca tcgagatgtg
     1861 acgcgatttc ccgcagccgg ccgatgccga ctcccttgca caagcctgac tcgagcatgc
     1921 cgacgtagct ccccgagcga acgccgagct ttgccgccaa gtccttttga gtgagccccg
     1981 tattcatgcg ggccagtcga atcaatcgcc cgatcttctt cgtggttcgc ctgctactca
     2041 tggaatgcct gccaaacgta gcgagctgcg aaatgaccaa ggctcatccg cagcccctcc
     2101 ttccaacctc aactggctcg gtgagcgtcg ctccgccgag tgtttgcgag actagtctta
     2161 tgcgtgcttc atcgcaagaa gcacgattca caaaacgcgt ctgggacgcc tcgccgtcac
     2221 cccagccaga tgtacatgag gggtcaagac accccgtcga agtcggtcgg tctcgagcgc
     2281 tagttccagc agagttgcaa agtggcgaag cgcatcggcg cgtcgcggac gtcgaactct
     2341 cgctgtttag atgtcgagat tccgtacgtt gagcgcgttc tcttcgatga attggcggcg
     2401 tggctcgacc tgatcgccca tcaacacgct gaaaagttcg tccgcccgca cggggtcgtt
     2461 aacgcggacc tgcaggagcg tgcgcgcgtc cgggctcatc gtcgtgtccc aaagttgatc
     2521 ggcgttcatt tcgccgagac ctttgtagcg ggtgatttgc atgcccttgc gaccacgctc
     2581 ggtgatgaag gcctgcagac tctcggcatc gggcaggatt tggccctgtt cctcgccgac
     2641 gcgcaccgtg tagggcgcgg ggccgatcga gcgcacgtcc tcgtcgatcg agagcagttc
     2701 ttggtactcc gccgattcgg cgagctccca gtcgacggtg gcggggcgtg aagaagcacc
     2761 ggggcgaaat ttcacgacga tgcgcccggc gccgtgctgc ttctcccatt cgaccgtgac
     2821 ggtgagcggc gtcagatcgg ggtagcgatt cgagagctcg gtcttgagct tctccgcggc
     2881 agcatcgacc ttcgcgcgat cgcgaaagtc ggcgagcgac atgcctccga cacgaaatag
     2941 cgcagccacg acgcgcgcgt cgcagcgcgt gtcgattttc tgcagcgtgt cgtgcagagc
     3001 acgcaggcgc gtggcgagat tgaacagcac catgccggag agggtcggtc ccttgctcga
     3061 ctgcagcgtg agaccctcga tgccgttttc gatcaggaag cggtcgagag ccgcctgatc
     3121 cttctggtaa aaatgccgct tgcccttgcg cacgccgtag agcggcggct gggcgatgaa
     3181 cagatagccg cgctcgatca cctcgcgcat ttgccgatag aagaacgtga gcaggagcgt
     3241 gcggatgtgg ctcccgtcga cgtcggcgtc cgtcatcagc acgaccttgt gatagcggag
     3301 cttcgagagc tcgaaattgc cactctcgtc gatgccgcag ccgagcgcgg agatgagcgt
     3361 cgcgacctct tgcg
//
LOCUS       DATIML010000159         1985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1765309, whole genome shotgun sequence.
ACCESSION   DATIML010000159 DATIML010000000
VERSION     DATIML010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1765309"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..562)
                     /locus_tag="VLJ38_02775"
     CDS             complement(164..562)
                     /locus_tag="VLJ38_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38455.1"
                     /translation="MVGFTAWDAVRRVSARTGALVVLGVLLSGGCAGKSNDGSESDPC
                     PDVCARGSKCPGAPPLPASCDDTCLGQDALALDSGCHDLYVASIQCSAKLADICTALT
                     ACRTEINAVNACEYNYCMAHPAADVCVGVM"
     gene            819..>1985
                     /locus_tag="VLJ38_02780"
     CDS             819..>1985
                     /locus_tag="VLJ38_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU38456.1"
                     /translation="MFTWIAKKVFGTSNERAMRRLQPMVAAVNALEPALKELSDAELQ
                     AKTPYFKEKLDNGATLDDILVEAFAVCREAGRRVLRMRHYDVQLIGGAVLHKGAIAEM
                     RTGEGKTLVATLPVYLNALEGKGVHVITVNDYLAKRDAEWMGRIYKFLGMSVGTIVNG
                     QYDEEKKASYKADICYGQNNEFGFDYLRDNMKYSALDYCQRPLHYAIVDEVDSILIDE
                     ARTPLIISGPAEAASDSYRTLNEVVARLRKDEHFSVDEKGFSAALTDEGVEHVQKAIG
                     VRNLYDPVNVQTLHIVNQLLRAHALYKRDQHYMVSPDGKVLIIDEFTGRVLAGRRWSD
                     GLHQAVEAKENVRIQEESRTMATITFQNLFRIYKKLGGMTGTAETEAQEFSATYK"
BASE COUNT          389 a          684 c          633 g          279 t
ORIGIN      
        1 cgcgagcagc cacaccaatt cggcgttcgt ggtttacgtc gcgctcggcc ccgaccgccg
       61 ccccacgccc gcaccgccgc tcgagctcac gacggacgaa gagcgcgcga gcttcgcggc
      121 gggcgcggca cgacacgcgc gacgtctcgc ccagcgttga acgctacatc acgccgacgc
      181 acacgtcggc cgcggggtgc gccatgcagt agttgtactc gcacgcgttc acggcgttga
      241 tttcggtgcg gcacgccgtg agcgccgtgc agatgtccgc gagcttggcg gagcattgaa
      301 tcgacgcgac gtagagatcg tgacagccgc tgtcgagggc gagcgcgtcc tgtccgaggc
      361 acgtgtcgtc gcagcttgcc ggcaggggcg gcgcgccggg acacttcgag cccctcgcgc
      421 acacgtccgg gcacggatcg gactctgaac cgtcgttgct cttgccggca cagccgccgc
      481 tgagcaaaac ccccaaaacc acgagcgcgc ccgttctcgc actcacacgc cgcaccgcgt
      541 cccacgccgt gaacccgacc atgctccaaa actagcatgg acacgtgccc ccgcccgcgc
      601 ggccctcggc gccgctgcca gggaagagca gcgcgaactc gccggttcta gtcacgggcc
      661 cgcgcacgtt cgggaagact ccgcgcgggt cagcgccgga ccgacgctgc gggcgcgcag
      721 aaaagcgttc aaagcgcctc gttcgttcga gctcaggcgc taagatgaag ggctggcgta
      781 gccccccgct cgggactacg ttgccgcgga cgtccccaat gttcacctgg atagcgaaga
      841 aagtcttcgg aacctccaac gagcgcgcga tgcgccggct tcagcccatg gtggcggccg
      901 tcaacgccct cgagcccgcg ttgaaggagc tgagcgacgc cgagctccag gcgaagaccc
      961 cgtacttcaa ggagaagctc gacaacggcg cgacgctcga cgacatcttg gtcgaggcgt
     1021 tcgccgtgtg ccgcgaagcg gggcgtcgcg tgctgcgcat gcgccactac gacgtgcagc
     1081 tcatcggcgg cgcggtgctg cacaagggcg ccatcgccga gatgcgcacc ggtgaaggca
     1141 agacgctcgt cgcgacgctg cccgtgtacc tgaacgcgct cgagggcaaa ggcgtccacg
     1201 tcatcaccgt gaacgactac ctcgccaagc gcgacgccga gtggatgggc cgcatctaca
     1261 agttcctcgg catgagcgtc ggcacgatcg tcaacggcca gtacgacgag gagaagaagg
     1321 cctcgtacaa agcggacatc tgctacgggc agaacaacga gttcggcttc gactacttgc
     1381 gcgacaacat gaagtactcg gcgctcgact actgtcagcg ccccctccat tacgcgatcg
     1441 tcgacgaagt ggactcgatc ctcatcgacg aggctcgcac gccgctcatc atcagcggcc
     1501 cggccgaagc cgcgagcgac agctaccgca cgctgaacga ggtcgtggcg cgcctgcgca
     1561 aagacgagca tttcagcgtc gacgagaagg gcttcagcgc cgcgctcacc gacgagggcg
     1621 tcgagcacgt gcagaaggcg atcggcgttc gtaacctgta cgatccggtc aacgtccaga
     1681 cgctgcacat cgtcaatcag ctcttgcgcg cgcacgcgct ctacaagcgc gaccagcact
     1741 acatggtgag ccccgacggc aaggtgctca tcatcgacga gttcaccggt cgcgtgctgg
     1801 ccgggcgccg ctggagcgac ggcctgcacc aagccgtcga agccaaggag aacgtgcgga
     1861 tccaagagga gagccgcacg atggcgacga tcacgttcca aaacctcttc cgcatctaca
     1921 agaagctcgg cggcatgacg ggcacggcgg agacggaagc gcaggaattc agcgccacct
     1981 acaag
//
LOCUS       DATIML010000160         4233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4941992, whole genome shotgun sequence.
ACCESSION   DATIML010000160 DATIML010000000
VERSION     DATIML010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4233
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4941992"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VLJ38_02785"
     CDS             complement(<1..269)
                     /locus_tag="VLJ38_02785"
                     /inference="COORDINATES: protein motif:HMM:NF015450.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38457.1"
                     /translation="MDAQLIIAERVRDAIIRAFGADFREAEPAVHRSSFADYQADAAL
                     RLAKPLRKPPLEIAQTIAANLDTSGLCPPDGVTVSPPGFVNITLGR"
     gene            complement(275..1615)
                     /gene="argG"
                     /locus_tag="VLJ38_02790"
     CDS             complement(275..1615)
                     /gene="argG"
                     /locus_tag="VLJ38_02790"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HSU38458.1"
                     /translation="MSRIYKSLPPKGTRLGIAFSGGLDTRCAVAWLSRQGLQIHAYTA
                     DLAQPDEKDPATIPPVALEHGAVAARLVDCREALAREGITAIQCGAFHLATAGKKYFN
                     TTPLGRAVTATAIIRAMREDGVDVFGDGSTHKGNDIQRFYRYGLLTNPKLMIYKPWLD
                     QKFVDAFGGRREMSEYLVSLKLPYTMSTEKAYSTDSNVLGATHEAKDLEQLDHGLHIV
                     EPIMGVPHWRADARIDSERVTVAFERGRPVELNGERYDTAIELMLEANRIGGRHGFGT
                     SDQIENRVIEAKSRGIYEAPGMALLHAAYERLLSAIHNENTLDLYFTLGRRLGRVLYE
                     GKWFDPEAMLMKDALTRWIAPSVTGQVELELRRGDDYSILRTEADFMTYAPEKLSMER
                     VEDAAFQPGDRIGALEMQTLPVTDARAFLAHHLAAVAELGPGENPLPELLGKGS"
     gene            1791..2300
                     /locus_tag="VLJ38_02795"
     CDS             1791..2300
                     /locus_tag="VLJ38_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38459.1"
                     /translation="MEIQRMPDGSHDITCPGTPLVKCLDNVETVCKGASYEVLYARDE
                     QKTYGVEQTYVEKHTSRAQVHCLGLHEEPRSDGVALAAPSGSALAPGASAAPGASAAA
                     PSDGSVGVAGGAAATHGAGTSPHACVPGATQACVGVAACAGGQACLPDGSGYGPCDCG
                     APASGAPSR"
     gene            complement(2249..3283)
                     /locus_tag="VLJ38_02800"
     CDS             complement(2249..3283)
                     /locus_tag="VLJ38_02800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38460.1"
                     /translation="MPMASDASLLQRRAPLVIGAVFALLVALGAVLVAHRHAALPRPA
                     PALHPLAVVPAGPALLVSVDVARLRKTRAGAAFVAKSLAELAPKPCEASLLGQIDELA
                     FAMPSETGADTTSSDTFALIATGHFTGANVSACAEARIGTRGGNAIKTTLGSFTSVRD
                     RSRAGEIAVRDGLLVLSNGAYLRELIDAADGHRADGTPAEHQRDELHVELRRVTGRGA
                     PLIATLVLPPGWLSRTLVDRTAEQSPLAAIRTAALRADASDQLDVAGVVGCATGDACE
                     RLERFVENARADLTTFAPGFAELLARVHFVRTDARLAFEAHIAEAELEALWTQREGAP
                     DAGAPQSHGP"
     gene            complement(3315..>4233)
                     /locus_tag="VLJ38_02805"
     CDS             complement(3315..>4233)
                     /locus_tag="VLJ38_02805"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSU38461.1"
                     /translation="KRARRASTRGILAAMADSLRDEHERHAEDPSRRVLLAGAAGAGF
                     ALAVRPVAADTITTSAAGLSVADVRVPTSAGEIPAYRAMPADKSQKKHPLVLVVHEIF
                     GVHEHIRDVCRRLAKQGYFAVAPDLFVRQGDVTKLAGMDEIRKVVNAAPDAQVLHDLD
                     ATVRWAEHEPADIGKLAVTGFCWGGRIVWLYAAHREDLKAGVAWYGKLTGDKNDLRPR
                     QPLDLGAAINAPVLGLYGGKDQSIPPTDVEAMKKLLAGGNQAARASEILVYPQAGHAF
                     LADYRPSYEPHAAADGWQRMLGWFKRHGV"
BASE COUNT          597 a         1364 c         1566 g          706 t
ORIGIN      
        1 cggccgagcg tgatgttcac gaagccgggc ggggagacgg tcacgccgtc cggcgggcac
       61 aggcccgacg tatcgagatt tgccgcgatg gtctgcgcga tttcgagcgg cggcttgcgg
      121 agtggcttcg cgagccggag cgcggcgtcc gcctggtaat cggcgaagct cgagcggtgc
      181 acggcgggct cggcttcgcg aaaatcggcg ccgaatgccc ggatgatcgc gtcgcgcacg
      241 cgctcggcga tgatgagttg ggcgtccacg cgactcagga acccttgccg agcagctccg
      301 gcagcgggtt ttccccgggg ccgagctcgg cgacggccgc gagatgatgc gcgagaaagg
      361 cgcgcgcgtc ggtgacgggt agcgtctgca tctcgagcgc gccgatgcga tcgcccggct
      421 ggaaggcggc gtcctcgacg cgttccatcg agagcttttc gggcgcgtag gtcatgaagt
      481 ccgcttcggt gcggaggatc gagtagtcgt cgccgcggcg gagctcgagc tcgacttgac
      541 cggtgacgct cggcgcgatc cagcgcgtga gcgcgtcctt catgagcatc gcctcggggt
      601 cgaaccattt gccctcgtag aggacgcggc cgaggcggcg gccgagcgtg aagtagagat
      661 cgagcgtgtt ttcgttgtgg atggccgaga gcaggcgctc gtaggcggcg tgcaggagcg
      721 ccatgccggg tgcctcgtaa atcccgcggc ttttggcttc gatcacgcgg ttttcgattt
      781 gatcgctcgt gccgaagccg tggcggccgc cgatgcggtt ggcttcgagc atgagctcga
      841 tggccgtgtc gtagcgctcg ccgttgagct cgaccgggcg gccacgttcg aacgccacgg
      901 tgacacgctc cgagtcgatg cgagcgtccg ctcgccagtg gggaacaccc atgatcggtt
      961 ccacgatgtg caaaccgtgg tcgagctgct cgagatcttt cgcttcgtgc gtcgcgccga
     1021 gcacgttcga gtccgtgctg tacgctttct cggtgctcat cgtgtacggg agcttgagcg
     1081 acacgaggta ctcgctcatc tctctcctgc caccgaaggc gtcgacgaac ttttggtcga
     1141 gccagggctt gtagatcatg agcttcgggt tcgtgagcaa gccgtagcgg tagaagcgct
     1201 ggatgtcgtt gcccttgtgc gtgctgccgt cgccgaacac gtcgacgccg tcctcacgca
     1261 tggcgcggat gatggcggtc gcggtcacgg cgcggccgag cggcgtcgtg ttgaagtatt
     1321 ttttgccggc ggtcgcgagg tggaaggcgc cgcactgaat tgcagtgatg ccttcgcgcg
     1381 ccagggcttc gcggcagtcg accaggcgcg cggccacggc gccgtgctcg agcgcgacgg
     1441 gcggaatcgt cgccggatct ttttcgtccg gttgggcgag atcggccgta taggcgtgaa
     1501 tttgcaggcc ttggcgcgag agccaggcga cggcgcagcg cgtatcgagg ccgcccgaaa
     1561 aggcgatgcc aaggcgcgtg cccttcggcg gcaaagactt gtagatgcgg ctcatgctgc
     1621 gctcccggta gcattgacgg gccgtcgcgc ccaggtgctt tgccggccgt gcgtctgcta
     1681 gcctcgccgc ctcgcgaatg atgacgctcc gaagaacggc tcggcgtggt gtgagcggct
     1741 gggtccccgc tttggtcgtg ctttttgggg tggggtgcgc gcggtccggc gtggagatcc
     1801 agcggatgcc cgacggctcg cacgacatca cctgtccggg gacgccgctc gtcaagtgcc
     1861 tcgataacgt ggaaaccgtc tgtaaaggcg cgtcgtacga ggtactttac gcgcgcgacg
     1921 agcagaagac ttacggcgtc gagcagacgt acgtcgagaa acacacgagc cgcgcgcagg
     1981 tgcactgctt ggggctgcac gaagagccac gctcggacgg cgtcgcgctg gcggcgccga
     2041 gtgggtcggc gttggcgccc ggggcgtcgg ctgcgccagg ggcgtcggcg gcagctccga
     2101 gtgacggttc cgtgggggtg gctggcggcg cggcggcgac gcacggcgcg ggaacgtcgc
     2161 cgcacgcgtg cgttccgggt gcgacgcagg catgcgtcgg tgtggccgcg tgtgcgggcg
     2221 gccaggcgtg cttgcccgac ggcagcggct acggtccgtg cgactgcggc gcgccagcgt
     2281 ccggcgcgcc ttcacgctga gtccagagcg cttcgagctc ggcctcggca atgtgcgctt
     2341 cgaacgcgag tcgcgcgtcg gtgcgaacga agtgaactcg cgcgaggagc tcggcgaagc
     2401 ccggcgcgaa cgtggtcaga tcggcgcgtg cgttttcgac gaaacgctcg aggcgctcgc
     2461 aagcgtcgcc ggttgcgcag cccacgacgc ccgcgacatc gagctggtcc gaggcgtccg
     2521 cgcgcagcgc agcggtgcga atcgcagcga gcggcgactg ttccgccgtc cgatcgacga
     2581 gcgtccgact gagccagccc ggaggcagca cgagcgtcgc gatcaagggc gcgccacggc
     2641 ccgtgactcg gcgcagctcg acgtgaagct cgtcgcgctg gtgttcggcg ggtgtgccgt
     2701 cggcgcggtg cccgtcggcc gcgtcgatga gctcgcgcag gtacgcgccg ttgctcaaga
     2761 cgaggagccc gtcgcgcacg gcgatttcac cggcgcggct gcggtcccgc accgacgtga
     2821 aggagccgag cgtcgttttg atcgcgttgc ccccgcgcgt tccgatgcgc gcctcggcgc
     2881 aggcgctgac gttcgctccc gtgaagtgcc ccgtggcgat gagcgcgaac gtgtcgctgc
     2941 tcgtcgtgtc cgcgcccgtt tcgctcggca tcgcgaacgc gagctcgtcg atttggccga
     3001 gtaacgacgc ttcgcagggt ttgggcgcga gctcggcgag gctcttggcg acgaacgccg
     3061 cgcccgcgcg cgtcttacgc aggcgcgcca cgtcgacgct cacgagaagc gccggacccg
     3121 cgggcacgac cgcgagcggg tgcagcgccg gcgcgggtcg cggtagcgcc gcgtgccggt
     3181 gcgcgacgag cacggcgccg agcgcgacga gcagcgcgaa cacggcgccg atgactagcg
     3241 gcgctcgccg ttgcagcagg ctcgcgtcac ttgccatcgg cacggagtag cgcgttctcg
     3301 aagacgaggc agcttcagac gccatgccgc ttgaaccaac cgagcatgcg ctgccagccg
     3361 tccgccgccg cgtgcggctc gtaactcggc cggtaatcgg cgaggaaggc gtggcccgcc
     3421 tgcggataga ccaggatttc gctcgcgcgc gcggcttggt tgccgcccgc gaggagcttc
     3481 ttcatcgcct cgacgtccgt cggcgggatt gactgatctt tgccgccgta gaggccgagc
     3541 acgggcgcgt tgattgccgc gccgagatcg agcggctgcc gcgggcggag gtcgttcttg
     3601 tcgcccgtga gcttgccgta ccaggcgacg ccagccttca gatcttcgcg gtgcgccgca
     3661 tagagccaaa cgatacggcc accccaacag aagcccgtga cggcgagctt gccgatgtct
     3721 gctggctcgt gctcggccca gcgcacggtg gcgtcgaggt cgtgcagcac ctgcgcgtcg
     3781 ggcgccgcgt tcacgacctt gcggatctcg tccatgccgg cgagcttggt cacgtcgccc
     3841 tgccgcacga acagatccgg cgcgacggcg aagtagccct gtttcgcgag gcgccggcag
     3901 acgtcgcgga tgtgctcgtg cacgccgaaa atctcgtgca cgacgagcac gagcgggtgc
     3961 ttcttttggc tcttgtccgc gggcatcgcc cgatacgccg ggatttcgcc ggcgctcgtg
     4021 gggacgcgca cgtcggcgac gctcaggccc gcggcgctgg tcgtgatcgt gtcggcggcg
     4081 acaggcctca cggcgagcgc aaaaccggca cccgccgcgc cggccaggag cacgcgccga
     4141 gacggatcct cggcgtggcg ctcgtgctcg tctcgcagcg aatcggccat ggcggcgagt
     4201 atgccacgcg tgctcgcgcg ccgggctcgc ttc
//
LOCUS       DATIML010000161         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2053961, whole genome shotgun sequence.
ACCESSION   DATIML010000161 DATIML010000000
VERSION     DATIML010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2053961"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VLJ38_02810"
     CDS             <1..450
                     /locus_tag="VLJ38_02810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38462.1"
                     /translation="GAESDPFESGVSKKTDLRERGNAALSEARVLARYSGRDEELTKP
                     SVMLVDWCGDDEVTVRWDATRHQRLLPSPKTVDLDDMDDNPFAPRRFRGIGARAGSVL
                     LGLVLGVAVTIGVLAVFAPRTVTDEPSASTSTDTNERAVVDVVSLRP"
     gene            493..1728
                     /locus_tag="VLJ38_02815"
     CDS             493..1728
                     /locus_tag="VLJ38_02815"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HSU38463.1"
                     /translation="MFVAFIAAYAGVLLSTLAFAALNLRHQREHGREVPPELVGVVEP
                     ERLARIEAYTRDRARLGMVERATSGALTGVCLFAGPLVLYDRFIASVASTFVGRGVTF
                     VLGLVLLGALLGLPFSYYRSFVVEARHGFNRMSRGLFFADWIKGTVLSLVFVGGLSLL
                     GFWLVRALPGSWWLWVWLAFTAVSLGLTFIAPYVIEPLFFRMEPLKLDALAGEVRALA
                     ERAGVHVRRVLQVDASRRSAHSNAYFTGLGRVKRVVLFDTLLAQMSHAEILAVLSHEL
                     GHWKKHHVLVRTLASFALSLVVAYVAFRAVSAPFVPELVGVTALSFPARLVVLAAFAS
                     VLTFPLTPLGAAWSRHDEWQADHFAVELADCAPALASALAKLSRENLSNLHPHPLYAK
                     FYYSHPPVTERIRALATQA"
BASE COUNT          225 a          599 c          583 g          349 t
ORIGIN      
        1 ggagccgagt cggatccctt cgagagcggc gtttccaaaa agacggatct gcgggagcgc
       61 ggtaacgcgg cgctctcgga ggcacgggtg ctcgctcgct actcgggccg agacgaagag
      121 ctcaccaagc cgagcgtgat gctggtcgat tggtgcggtg acgacgaggt caccgtgcgc
      181 tgggacgcga cgcggcacca gcggctactg ccgagcccca agaccgtcga cctcgacgac
      241 atggacgaca acccgttcgc tccgaggcgc tttcgaggca tcggcgcgcg agccggcagc
      301 gtactgctcg gtctcgtgct cggcgtcgcg gtgaccatcg gcgtgctcgc ggtcttcgcg
      361 ccccgcacgg tgaccgacga gccgagcgcg agcacgagca cggatacgaa cgagcgggcg
      421 gtcgtcgacg tcgtgagtct gcgtccctga tcgaacatgc tcgggtccgc tcgggtgcta
      481 gaagacccga gcatgttcgt cgcattcatc gccgcctacg cgggcgtact gctctcgacg
      541 ctggcgttcg ccgcgctcaa tttgcgtcac cagcgcgagc acggtcgcga agtgccgccg
      601 gagctcgtgg gggtcgtcga gccggaacgt ctcgcgcgca tcgaagctta cacgcgcgac
      661 cgcgcgcgtc tcggtatggt cgagcgcgcc acgagcggtg ccctgaccgg cgtttgcctg
      721 ttcgcgggcc cgttggtgct ttacgatcgc ttcatcgcga gcgtcgcgag cacgttcgtc
      781 gggcgcggcg tcacgttcgt gctcgggctc gtgctcttgg gtgcgctctt gggtctgccg
      841 ttctcgtact accggagctt cgtcgtcgag gctcgccacg gcttcaatcg catgtcgcgc
      901 ggtctgttct tcgccgactg gatcaagggc accgtgctct cgctcgtgtt cgtcggcggc
      961 ttgagcctgc tcgggttttg gctcgtgcgc gcgctgcccg gctcgtggtg gctttgggtc
     1021 tggctcgcgt tcacggcagt gagcctcggt ctgacgttca ttgcgcctta tgtcatcgaa
     1081 ccgttgtttt ttcgcatgga gccgctcaag ctcgacgcgc ttgccggcga agtgcgtgcg
     1141 ctcgcggagc gagcgggcgt gcacgttcgg cgcgtgttgc aggtggacgc ctcgcgccgc
     1201 agcgcgcatt cgaatgcgta ttttaccgga cttggccgcg tgaagcgcgt cgtgctcttc
     1261 gacaccttgc tcgcgcagat gtcgcacgcc gagatcctcg ccgtcttgtc gcacgagctc
     1321 ggtcactgga agaagcacca cgtgctcgtg cggacgctcg cgagtttcgc gctgagcctc
     1381 gtcgtcgcgt acgtcgcgtt tcgagcggtc tcggcgccct tcgtcccgga gctcgtcggc
     1441 gtcacggcgc tctcctttcc cgcgcggctc gtcgtgctcg ctgcgttcgc ttccgtgctc
     1501 acgtttccgc tcacgccgct cggcgccgcg tggtcgcgtc acgacgagtg gcaggccgat
     1561 cacttcgccg tcgagctcgc cgattgcgcc ccggcgctcg cgagcgcgct cgccaagctc
     1621 tcgcgcgaaa acctctcgaa cctgcacccg cacccgcttt acgccaagtt ctactactcg
     1681 catccgcccg tgaccgagcg catccgagcg ctagcaacgc aagcctgacc ccttgcgcgg
     1741 cgcctcgatg cttacc
//
LOCUS       DATIML010000162         5234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5520919, whole genome shotgun sequence.
ACCESSION   DATIML010000162 DATIML010000000
VERSION     DATIML010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5234
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5520919"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            531..2165
                     /locus_tag="VLJ38_02820"
     CDS             531..2165
                     /locus_tag="VLJ38_02820"
                     /inference="COORDINATES: protein motif:HMM:NF017722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HSU38464.1"
                     /translation="MSAAPSAGGVGGAPSATAGGSGGAPSVAGTAGSFGGMGLATAGS
                     GAVAGSSNGGAGGLGAAGAGLASSSGRAGATAAGNGGGAGAAPLGALTLTGLKVDPNP
                     NMTISCFVSWTTAEPASSEVDFGETSYTSRIRDMTLTTDHRVLVIGMHAQKAYKLKAV
                     SATATASGSLEGTFTTGMLPASLPTPMLTASDAASTQPGWTLTNIMPATSGPALAVMY
                     DEKGLPVWYYVHGTHADSRGDVDTKLVGSSVLVGPTSGEPAREVDLSGKVLWEGPAQS
                     NQELATHFFGKTSTGDYFLNIELDKAVQNGSTKIDNQRIEELSASKTSVWSWTLFDHI
                     MPAGNREELCHGNLIIDDPAAGVVYYNCRFLGLLKLERSSGNILWRLGGSYDTTSIGP
                     GDFTFDPPASQFSDSHEPEFHDDGTLILYDNGGYSQSGGFGGNSQNYHSRVVEYQLDE
                     TKKTATRTWEFPGSFDVDAWYKTSWYSPYWGDADRLPNGNVLVTAPTKSSSASTRIFE
                     VTRAGKVVWELTMPVNVGSFKADRLTPPPLVEAITP"
     gene            complement(2155..3174)
                     /locus_tag="VLJ38_02825"
     CDS             complement(2155..3174)
                     /locus_tag="VLJ38_02825"
                     /inference="COORDINATES: protein motif:HMM:NF017864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HSU38465.1"
                     /translation="MSVSHAAATVRVFRGEHVDAIHTASVAVVDEAGRLVAAWGEPAA
                     NVVLRSTAKPFQALPLVSSGALEALGIDAAELAVACASHSGSDRHVAVVTRLLARSGA
                     SVDALKCGTHLPIEFRLHGAYPLHGEDRDPLRHNCSGKHAGFLALSRQLAQPPATYLE
                     PQGVVQTAVRRAIERAAELPPDSLVPAIDGCSAPTYALPLTHVALAFRNLALATAPDR
                     GTASALARVREAMQKEPFLISGDGRFDHELARSFPGNIVNKGGAEAIQGIGLRDPPLG
                     IAIKVHDGGERALAPLCVAVLQTLGVIDTLSRFPLLEPHARPTLRNHAGLTTGELRVE
                     LAARA"
     gene            complement(3225..4403)
                     /locus_tag="VLJ38_02830"
     CDS             complement(3225..4403)
                     /locus_tag="VLJ38_02830"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU38466.1"
                     /translation="MAVDVLALTIMLPLLPFYAEHFGASPAVVGLLVGTYAFCQLVAG
                     PVLGQISDRVGRKPVLAVSQVGTFAGLLLLAWAPNLAVVFVARVLDGLTAGNLSTAQA
                     YIADTTHPKERARAFALIGIAFGIGFLVGPGASGYLTHQFGFRVPILGAAALSLLSIL
                     GTLVLLPGGKPEHVGAHDPNAPAAPGGRRLRVLDWGTYAGYFRRPVLGALLFEFFLFT
                     LAFAMFTSGAALFAERRYSLHGVPFGPKEVGYVFMYSGFLGIIVQSSLRQGALVRAVR
                     EPRLVLLGFLTAAVGYALLGASHGISSLGVAVTIASFGTGVLRPVLTSLITQHVSRGE
                     QGVVLGLNQSLMSVSQIVGPIVAGALIDRRLLTEWALLAGTIMLAGVASSVRGLKARA
                     "
     gene            complement(4514..>5234)
                     /locus_tag="VLJ38_02835"
     CDS             complement(4514..>5234)
                     /locus_tag="VLJ38_02835"
                     /inference="COORDINATES: protein motif:HMM:NF018038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ThuA domain-containing protein"
                     /protein_id="HSU38467.1"
                     /translation="AAGEAGIGAAGAPSGALGVLVFSKTAAFRHDSIPDGQAALANVA
                     ASSAWTLTTTDDAAVFTDAGLEPLDVVVFLSTTGDVLDDDQQAAFERFIGAGKGFVGI
                     HSASDTEYDWPFYGELVGAYFREHPAIQAADLKLEDPNDPTTAGLPTTWTRTDEWYAF
                     SENPRPNVHVLLTLDESSYSPGTATMGADHPVTWLHEYAGGRAFYTALGHTKQSYDEP
                     LFIGMLTRAIEWAGGRVSDPR"
BASE COUNT          934 a         1630 c         1883 g          787 t
ORIGIN      
        1 tgaaggcaag ctccgcgtaa gctcggcctt ttggttctcc ggtgaacgta atgcccgcac
       61 cgagctgtcc gtttggcgcc gcgaagcgat ccgtgcggtc gagcgtggtt tctgcggcaa
      121 aagcctgggt agtgacggcg aacaaaatca gcgttgaagc tgcaaagggt cgcatcgagc
      181 tcctcctcag cctgagctgc gtcaggcaca tccgaaactt tctatcccag tgtcatcaca
      241 gcaccaagga atcggtgctc gcgaacgcag ggatatcgca ggctgtaggt cgacgtgcgt
      301 gcgagtcggc gagtcgcatc cttttgctga cttcgttcac gctctgtggg tacagacact
      361 cgcaaagcat gacgtgtcac tctgccgtga ggtgcgtagc gcgcgggtgg gtacggctcg
      421 gcgcgcgcct tgcgacgagc ggcacctggt tggtgctggt ggcgtgcgga ggcggaacga
      481 cgagcgccga tcacgcgcct gcaacacggg cttcggcggg acacgccggc atgagcgcgg
      541 cgccctcggc gggtggagta ggcggcgcgc cgagcgctac tgccggcggc tccggtggcg
      601 caccgagcgt tgccggtacc gccggatctt tcggcggcat ggggctcgca acggcgggaa
      661 gcggcgccgt ggctggctct tcgaacggcg gcgcgggtgg gctcggagca gcgggtgcgg
      721 gcctcgcgag tagctcggga agggccggag cgacggctgc gggcaacggt ggcggtgcgg
      781 gtgcggcacc gctcggcgcg ttgacgctta cgggtctcaa ggtcgatccg aatccgaaca
      841 tgacgatctc gtgcttcgtc tcctggacga cggccgagcc cgcgagctcc gaagtcgatt
      901 tcggcgagac gagctacacg tcgcgaattc gggacatgac gctcacgacc gaccatcgag
      961 tgctcgtcat cggcatgcac gcgcagaagg cgtacaagct caaagccgtc tccgcgacgg
     1021 cgacggcgtc gggcagcctc gaggggacgt tcacgacggg catgcttccg gcgagcttgc
     1081 cgacgcccat gttgacggcg agcgacgctg cgagcactca accgggctgg acgctcacga
     1141 acatcatgcc ggccacgagc gggcccgcgc tcgccgtgat gtacgacgaa aaggggctcc
     1201 ccgtttggta ctacgtgcac gggacgcacg cggacagccg cggcgacgtc gacacgaagc
     1261 tcgtgggaag cagcgtgctc gtgggaccga cgagcggcga gccggcacgg gaagtcgacc
     1321 tttcgggaaa ggtgctgtgg gaggggcccg cgcagagcaa tcaagagcta gcgacgcact
     1381 tcttcggcaa gacctcgacc ggcgactatt ttttgaacat cgagctcgac aaagccgtcc
     1441 aaaacggctc gaccaagatc gacaatcaac gcatcgagga gctcagcgcg agcaaaacca
     1501 gcgtctggtc gtggacgctg ttcgatcaca tcatgcccgc cggcaatcgc gaggagcttt
     1561 gccacggcaa tctgatcatc gatgacccag cggcgggggt cgtctactac aattgtcgtt
     1621 ttctcggcct gctcaagctc gagcgctcgt cgggcaacat cctgtggcgg ctcggcggca
     1681 gctacgacac gacgagcatc ggtcccggcg acttcacgtt cgatccgccg gcgtcgcagt
     1741 tcagcgactc gcacgagccg gaattccacg acgacggcac gctcatcctc tacgacaacg
     1801 gcggctattc gcagagcggc ggcttcggcg gcaactcaca gaattaccac tcgcgcgtgg
     1861 tcgagtatca gctcgatgaa acgaagaaga cggcgacgcg cacgtgggag ttccccggca
     1921 gcttcgacgt ggacgcttgg tacaaaacga gctggtattc gccgtattgg ggcgatgccg
     1981 atcggctgcc gaacggtaac gtgctcgtga cggcgccgac caagtcgtcg agcgcctcca
     2041 cgcgtatttt cgaagtcacg cgtgcgggca aggtcgtgtg ggagctcacg atgcccgtga
     2101 atgtcggctc gttcaaagcc gatcggctta cgccgccgcc gctggtcgag gcaatcacgc
     2161 cctagcggcg agctcgacgc ggagctcacc cgtcgtgagg cccgcgtggt tgcgcagcgt
     2221 gggacgagcg tgaggctcga gcagcggaaa gcgcgagagg gtgtcgatga cgccgagcgt
     2281 ctgcaagacc gcgacgcaga gcggcgcaag cgcacgttcg ccgccgtcgt gcactttgat
     2341 ggcgatgccg agcggcggat cgcgcaagcc gataccctgg attgcttcgg cgcccccctt
     2401 attcacgatg ttgcccggga acgaccgggc gagctcgtgg tcgaagcgac cgtcgcccga
     2461 gatcaagaag ggctccttct gcatggcctc gcgcacgcgg gcgagcgcgc tcgcggtgcc
     2521 cctatccggc gccgtcgcga gcgccaagtt cctgaaggcg agggcgacgt gcgtgagcgg
     2581 caacgcatag gtgggggcgc tgcagccgtc gatggcgggc acgagcgaat cgggcggcaa
     2641 ctcggccgcg cgctcgatcg cgcgccgcac ggcggtctga accacgccct gcggctcgag
     2701 gtacgtcgcc ggcggctgcg cgagctggcg cgagagcgcc aaaaaaccgg catgcttgcc
     2761 ggagcagttg tgccgcaacg ggtcgcgatc ctcgccgtgc agcgggtagg cgccgtgcag
     2821 gcgaaattcg atgggcaggt gcgtgccgca tttgagtgcg tcgacgctcg cgccggagcg
     2881 cgcgagtagg cgcgtcacga cggcgacgtg ccgatcgctg ccgctgtggg acgcacacgc
     2941 aacggcgagc tccgcagcgt cgatgccgag cgcttcgagg gcgccggagc tcacgagcgg
     3001 caaggcttga aacggctttg cggtcgacct gaggacgacg tttgccgcag gctcgcccca
     3061 ggccgcaacg agccgaccag cttcgtccac gacggcgacg gacgccgtgt gaatggcgtc
     3121 gacgtgctca cctcggaaga cgcggaccgt ggccgcagcg tgggaaaccg acatgcgcgt
     3181 agtttacgcc gggcgtcgcg acgtgcggga gggccacaaa cgcttcaagc gcgggctttg
     3241 agtccgcgca cgctcgaggc cacgccggca agcatgatgg tgccggcgag caatgcccat
     3301 tcggtcaaga gtcgccggtc gatgagcgcg cccgcgacga tcggccccac gatttgcgac
     3361 accgacatga gcgattgatt caagccgagc acgacgcctt gctcgccgcg gcttacgtgc
     3421 tgcgtgatga ggctcgtgag cacgggtcgg agcacgcccg tgccgaagga cgcgatggtc
     3481 acggccacgc cgagcgagga gatgccgtga cttgcgccga gcagtgcgta gcccacggcc
     3541 gcggtgagga agccgagcag cacgaggcgt ggctcacgca cggcgcgcac gagcgcgccc
     3601 tgacgcagcg agctctgcac gatgatgccg agaaagcccg agtacatgaa gacgtacccg
     3661 acttccttcg ggccgaacgg tacgccgtgc agcgagtagc ggcgttcggc gaacagcgcc
     3721 gcgcccgagg tgaacatggc gaaggcgagc gtgaagagga agaactcgaa gagcagcgcg
     3781 ccgagtacgg ggcggcggaa gtagccggca tacgtacccc aatcgaggac acgcagccgg
     3841 cgaccgcccg gagccgccgg tgcgttcgga tcgtgcgcgc cgacgtgttc cggcttgccg
     3901 ccgggcaaca gcacgagcgt gccgagaatg ctgagcaagg agagggcggc tgcgccgaga
     3961 atcggcaccc gaaagccgaa ttggtgggtg aggtagccgg acgccccggg gccgacgaga
     4021 aatccgatgc cgaacgcaat gccgatcaac gcgaaggcgc gagcgcgctc tttggggtgc
     4081 gtggtgtcag cgatgtaggc ttgcgccgtc gagaggtttc ctgccgtgag tccgtcgagc
     4141 acgcgcgcca cgaagaccac ggcgaggttc ggcgcccagg cgagcagcaa gagtcctgcg
     4201 aaggtgccga cctggctcac tgcgagcacg ggtttgcgcc cgacccggtc ggagatttgc
     4261 ccgagcacgg ggccggcgac gagctgacag aacgcgtagg tgccgacgag taagccgacg
     4321 actgcgggac tcgcgccgaa gtgctcggcg taaaacggca agagcggcag catgatcgtg
     4381 agggcgagga cgtcgaccgc cacgatcaga aaaatgggga ggagcgaaac gccgcccgac
     4441 gtacttttgc ctggagaggg agccaagaag ggtgccgggg taggcggccg cccgcgtctt
     4501 agcacgcgtg gacttagcgg gggtccgaaa cgcgcccgcc tgcccactcg atcgcgcgtg
     4561 tgagcatgcc gatgaacagt ggctcgtcgt agctctgttt ggtgtggccg agcgcggtgt
     4621 agaaggcgcg gccgccagcg tactcgtgga gccaggtgac ggggtgatcg gcacccatcg
     4681 tcgccgtgcc gggcgagtaa ctcgactcgt cgagcgtgag caggacgtgc acgttcggcc
     4741 gcggattctc gctgaacgcg taccactcgt cggtgcgcgt ccaggtcgtt ggcagtccgg
     4801 ccgtcgtcgg atcgttcggg tcttcgagct tcaggtcggc tgcttggatc gcggggtgct
     4861 cgcggaagta ggcgccgacg agctcgccgt aaaacggcca gtcgtactcg gtgtcactcg
     4921 cggagtggat gccgacgaag cccttgccgg cgccgatgaa gcgctcgaaa gccgcctgct
     4981 ggtcgtcgtc gagcacgtcg ccggtcgtcg agaggaagac gacgacgtcg agcggctcga
     5041 ggcccgcgtc cgtgaagacg gccgcgtcgt cggtcgtggt gagagtccag gccgagctcg
     5101 cggcgacgtt cgcgagtgcg gcttggccgt ccgggatcga atcgtggcga aaggccgccg
     5161 tcttcgagaa caccagcacg ccgagcgcgc cactcggcgc gccggcggcg ccgattcctg
     5221 cctcgcccgc cgcg
//
LOCUS       DATIML010000163         5127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1766378, whole genome shotgun sequence.
ACCESSION   DATIML010000163 DATIML010000000
VERSION     DATIML010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5127
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1766378"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..956)
                     /locus_tag="VLJ38_02840"
     CDS             complement(<1..956)
                     /locus_tag="VLJ38_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38468.1"
                     /translation="MSLRRANPTNWLAVYLAALLAGACGSDESGAGASSGSGGAGGSG
                     AIGHAGSDTAGRGANSSGGTGGASGGGAMSASGGASTGGTSAVAGRANGGATANGGAP
                     SMASGGADSSAGRSAGGTRGNAGGAAGTHGGNGAGGRDNAAGAGALGGRATSGGRGGA
                     SAGAASGGKAGGGTSGSGGMGSCDAPPDPSPLVGWASVSGNGVTTTTGGGTATPTVVT
                     TLADFTNAAKGTDAAVIYVKGKLAAGKVSVGSNKTIAGVCGAEIHGHLELSGSVNVIV
                     RNIKIVGYGVGDCSLDPDYDSGTGCSSGNDAVTVQKNAHHVW"
     gene            1211..2326
                     /locus_tag="VLJ38_02845"
     CDS             1211..2326
                     /locus_tag="VLJ38_02845"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSU38469.1"
                     /translation="MSISAISCVSESEEGVSIAPSVRMPLIDSVKGVAALLIVLHHLA
                     FYGPLSDVAYPLAPGALTWLSEYARMAVQAFLVIAGFGTARKLARLPQLGPREFGLEL
                     WSRYRRVGVPYLAALVLAIGCNELARRWMEHPSISAPPTWTQLLAHATFLTHILGFEP
                     LTAGVWYLAIDFQLLLVSLLLLALSQRIAGARNTPGVTPRLFIVLCSGLALWSLFWLN
                     RLSHLDNYAVYFFATYFLGMLVGWALQGTVSRPLVGVCLGIVAVALCYEFRPRLLVAL
                     ATTLLLLAGTHAKALQSWPNNRLLVGLGRISYSLFLVHFPICLLVNAWGSQHLTGSPH
                     AALFGMALAVVLSLVAAVIFYRYVEARCAPSRLRAES"
     gene            2327..2845
                     /locus_tag="VLJ38_02850"
     CDS             2327..2845
                     /locus_tag="VLJ38_02850"
                     /inference="COORDINATES: protein motif:HMM:NF024952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HSU38470.1"
                     /translation="MPPRALVAFPRVADAPAWARVLSARGRFDPLVHLVPPHLTLVFP
                     FEDTLSDAALDEHVLGVVARQRSFAVTLQGITAHEDEYLFLNVKRGNDELIQLHDALY
                     RGVLAAHRSRRRTFVPHVTIGRVARHELEGALAATAELASEIHATVESVSMLCVEADQ
                     VRQVFESALQSP"
     gene            complement(2886..3743)
                     /locus_tag="VLJ38_02855"
     CDS             complement(2886..3743)
                     /locus_tag="VLJ38_02855"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU38471.1"
                     /translation="MTHQLKAEPENTAARVALWRALHVQADPPPHVFVDEVGLKLVAP
                     PEGWQSRPDMSPFTRPFRASIVARARFIEDLVMEEAARGVGQYVILGAGLDTFAQRRA
                     ELAARLVVFEIDQPGPQAWKRQRLVELGLGVPPFLKLVPVDFEAGDAWWERLTAAGFD
                     AAKPAVVASTGVSMYLTKEAIAATLRQVAELAPGSTFAMSFMLPVEMADAEMRPMIER
                     AMAGAKANGTPFISFFTPAEMLAMGRTAGFKNVRHVSAAALAERYFAGRSDGLRPPDN
                     SEELLVART"
     gene            complement(4530..4796)
                     /locus_tag="VLJ38_02860"
     CDS             complement(4530..4796)
                     /locus_tag="VLJ38_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38472.1"
                     /translation="MHVAAAGQAVAAPQACVQYPPFQTTPPLVLAAGVQRPDAQSMFS
                     EQPAPMGSMLPTQLPLLASQTRLVPQLKPCRQSGRHDLAVLEQT"
BASE COUNT          719 a         1842 c         1650 g          916 t
ORIGIN      
        1 aaccagacgt ggtgcgcgtt cttctgcacg gtcacggcgt cgttgcctga cgagcaaccc
       61 gtgcccgagt cgtaatccgg atcgagcgaa cagtcgccca cgccgtagcc gacgattttg
      121 atgttcctca cgatgacgtt caccgagccg ctgagctcga ggtggccgtg aatttcggcg
      181 ccgcaaacgc ccgcgatcgt cttgttcgag ccgacgctca ccttgcccgc cgcgagcttg
      241 cccttgacgt agatcacggc tgcgtcggtg cccttcgccg cgttcgtgaa gtcggcgagc
      301 gtcgtcacca cggtgggcgt cgccgtcccg ccgccggtcg tcgtcgtcac gccgttgccc
      361 gacaccgaag cccacccgac gagcgggctc ggatccggag gcgcatcgca cgagcccatc
      421 ccgccgctcc cgctcgtgcc gccgcccgcc ttgcctccgc tcgcggcacc ggcgctcgcg
      481 ccgccgcggc cgccactcgt cgcgcgtccg cccagcgcgc cggcaccggc cgcattgtcg
      541 cgcccgcccg cgccgttgcc gccgtgagtt cccgccgcgc cgcccgcgtt gccacgcgtg
      601 ccgccggcgc tcctgcccgc gctcgaatcc gcaccgccgc tcgccatcga cggcgcgccg
      661 ccgttcgccg tcgcaccgcc gttcgcgcgt ccggcgacgg cactcgtgcc gcccgtgctc
      721 gcgccgccac ttgcactcat cgccccgccg ccgctcgcgc cgccggtgcc accgctactg
      781 ttcgcgccgc gacccgccgt gtcactcccg gcgtgtccaa tcgccccgct gccgcccgcg
      841 cctccgctcc ctgacgaggc tccggcgccg gactcgtcac tgccacaagc cccggcgagc
      901 agtgcggcca aatacaccgc gagccagttt gtcgggttcg cgcgtcgcaa agacaccaga
      961 tgctgcatga tcacttcgcc actcggcgcg cctgcgtggc ggccggaccc tgcatcagtt
     1021 gcgtggccgt ttccgagccg tcagaaaaaa cgcccgaagc ggcgaaaccc cttgaatcac
     1081 ccgggcctgc gcaacgtccc acggggcctc gaacgtggtg aactttgccc aaacccgcag
     1141 ggtacccagc gctgacgggc tcgcgaacct tgacaatacg cggagccctg ggcgactgag
     1201 gggcccgcac gtgtcgattt ccgccatttc ctgcgtgagc gagtccgaag agggcgtgag
     1261 catcgcgccc tcggtgcgca tgccgctcat cgattcggtc aagggcgtcg ccgcgctgct
     1321 gatcgtcctg catcacctcg cgttctacgg cccgctctcc gacgtggcgt acccgctcgc
     1381 cccgggcgcg ctcacctggc tgagcgagta cgcgcgcatg gcggtgcagg ccttcctcgt
     1441 catcgccggc ttcggcactg cgcgcaaact cgcgcgcctg ccgcagctcg gcccgcgcga
     1501 attcggactc gagctctggt cccgctaccg ccgcgtcggc gtgccgtacc tcgccgcgct
     1561 cgtcctcgcc attggctgca acgagctcgc gcgccgttgg atggagcacc cgtcgatttc
     1621 ggcgccgccc acctggacgc agctcctcgc gcacgcgacc ttcctcactc acattttagg
     1681 cttcgaaccg ctcaccgcgg gcgtctggta cctcgcgatc gatttccagc tcttgctcgt
     1741 gagcctgctc ctgctcgcgt tgagccaacg catcgccggc gcgcggaaca ccccgggcgt
     1801 cacgccgcgg ctcttcatcg tcctctgcag cgggctcgcg ctctggtcgc tcttctggct
     1861 caaccgcttg agccacctcg acaattacgc ggtctatttt ttcgcgacgt acttcctcgg
     1921 catgctcgtc ggctgggcgc tccagggcac ggtctcgcgc cccctcgtcg gcgtctgcct
     1981 gggcatcgtc gcagtcgccc tctgctacga attccggccg cggctgctcg tcgccctcgc
     2041 cacgacattg ctcctgcttg cgggcacgca cgccaaggcc ctgcagagct ggccgaacaa
     2101 cagactcctc gtcggcctcg gccgcatctc gtacagcctc ttcctcgtgc acttcccgat
     2161 ttgcctgctc gtcaatgcgt ggggctcgca gcacctcacg ggctcacccc atgcggcgct
     2221 cttcggtatg gcgctcgccg tggtgctgag cctcgtcgcg gcggtaatct tctatcgtta
     2281 cgtggaggcg cgttgcgccc cctcgcggct gcgcgccgag tcgtaggtgc cgccccgagc
     2341 cttggtcgcg ttccctagag tcgctgacgc gccggcgtgg gcacgtgtcc tgtccgctcg
     2401 cgggcgcttc gatcccctcg tgcacctcgt tccgccgcac ctgacgctcg tgtttccctt
     2461 cgaggacacg ctgtcggacg ccgcgctgga cgagcacgtt ctaggcgtcg tcgcgcggca
     2521 gcggagcttc gccgtcacgt tacagggaat taccgcgcac gaagacgaat acctgttttt
     2581 gaacgtcaag cgcggcaacg acgagctcat tcagttgcac gacgcgctgt acaggggcgt
     2641 gctcgccgcg catcggagtc ggcggcgaac gttcgtgccg catgtaacga ttggcagagt
     2701 ggcgagacat gagctcgagg gcgccctcgc cgcgacggcc gagcttgcga gcgaaattca
     2761 cgcgaccgtc gagtccgtct cgatgctgtg cgtcgaggcg gatcaggtgc ggcaggtgtt
     2821 cgagagcgcg ctgcagtcgc cctgagcgag ctcttgatcc atcacgtgaa agtagactcg
     2881 aaacgtcacg tcctcgcgac caagagctct tccgaattgt ccggcggtcg cagcccgtcg
     2941 ctccggcccg cgaaatagcg ctccgccagc gccgccgccg acacgtgtcg aacgtttttg
     3001 aagccggcgg tgcgtcccat cgccagcatt tccgcgggcg tgaagaagct gatgaagggc
     3061 gtgccgttcg ctttggcacc cgccatggct cgctcgatca tcggacgcat ttcggcgtcc
     3121 gccatctcga cgggcagcat gaacgacatg gcgaacgtcg agcccggcgc gagctccgcg
     3181 acttgccgta acgtcgccgc gatcgcttct ttcgtcaggt acatgctgac acccgtggac
     3241 gccacgaccg ccggtttcgc tgcatcgaac cctgctgccg tcagccgctc ccaccaggcg
     3301 tcgcccgctt cgaaatcgac gggcacgagc ttcagaaacg gcggaacccc gaggcctagc
     3361 tcgacgagcc gctgccgttt ccacgcctgg gggcccggct gatcgatttc gaacacgacc
     3421 aggcgcgcag caagctccgc ccgccgctgc gcgaacgtgt ccaggcccgc cccgagaatg
     3481 acgtactgcc cgacgccgcg ggcggcttcc tccatcacga gatcctcgat gaaacgagcg
     3541 cgcgcgacga tcgacgcgcg aaatggccgc gtgaacggac tcatgtcggg tcggctctgc
     3601 cagccctcgg gcggagcgac gagcttcaat ccaacctcgt cgacgaacac gtgcggcgga
     3661 ggatctgcct gcacgtgaag cgcgcgccag agagcgacgc gcgcggcggt gttttcgggt
     3721 tcggctttga gttgatgggt catgccgtcc ggctcgagcg taacatttgt accgattcgc
     3781 gggacggagt gatcgtttcg gtgtgacgca agacacagac gcgatgtgcg ccaggtcaaa
     3841 aaagaaatgt tcgttgcgtg cggacgcgcc ggcgcgcgga gcatgtgtcg catgcttgtc
     3901 gcgggtgtgc cgctttggct cgcgggctgc tcgtcgccgc cagcggccgg cacgacgaac
     3961 gccgcgcccg ccgcgctcgg acttgcctgc ggggcggacg gcgactgcgg gtccgggctt
     4021 tgtatcgagg aagagcgcgc gaacggcggc gtatcgtgga cggctggctc gtgcagtcag
     4081 agctgtagcg atagcgcgcc ttgtcctgca acgtccgcgt gcgtggcgtt cgaagacgca
     4141 agctcctggt gcttgacacg ctgcagcgcg gccgccgatt gtcgcgcggg gtacgtctgt
     4201 tcgacgggcg ccggagcttg tctgcccgac tgtcgcttgg gtttcagctg cggcacgagc
     4261 ctgagttgcg atgcggccag cggcagctgt gtgagaccgc ccggtatgcg cgcgatcggg
     4321 gcgagctgtc agttcaattc ggattgtgcg tcagcgctgt gtaccgtcga gcaaagctcg
     4381 agctccggga agatctgggc tgagggctac tgcaccgctg cctgcacggc ggcggcgccg
     4441 tgcgccaact cggccacttg catcacgtac gccgacggta gttctttctg cgccgccacg
     4501 tgcgccgcgg acaccgactg ccgcggcggc tatgtctgtt ccagaacggc caagtcgtgc
     4561 ctgcccgatt gccggcaagg ctttaattgt ggcacgagcc tggtctgtga cgcgagcagc
     4621 ggcaattgcg tcggcagcat gctgcccatc ggcgccggct gctcgctgaa catcgattgc
     4681 gcgtcgggcc tctgcacgcc ggcagcgagc acgagcggcg gcgtggtttg gaacggcggg
     4741 tactgcacgc aggcctgcgg ggccgcgacc gcttgccccg ctgcagcgac gtgcatcacc
     4801 tacgcggacg ggacttcgta ttgtgccgcc gcttgcacga gcagctccga atgccggacc
     4861 ggctacattt gttcgccggg cgtagcggcg tgtctgcccg attgccggca gggctttagc
     4921 tgcggcacgg ctttgagctg cgacgcctcg agcggtgcct gcggctgagt ttcgcccgcg
     4981 ccccgcagct gaacgtacga gcagccgcgc gaattctgcc tgcgtgagcg cgctgcggcg
     5041 actgtcttcg tgccccgtga tcgattccga gtgcgggtgg ccacagtcca agaaagcaat
     5101 ggtgagtctc gagcgcagcc acgagcc
//
LOCUS       DATIML010000164         3612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5232274, whole genome shotgun sequence.
ACCESSION   DATIML010000164 DATIML010000000
VERSION     DATIML010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3612
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5232274"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VLJ38_02865"
     CDS             <1..508
                     /locus_tag="VLJ38_02865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38473.1"
                     /translation="GLPHARHGNFAVLGNHDLWLDAEKIRALLAASGVTTLSGRCTTV
                     TLARGGVRLCGTEAPWGPALQRAAVAQNALEKLPLLVMTHTPDNIYALHELGAAAVFA
                     GHTHGGQMRLPVIGPLLVPSIYGRRFDLGHFNVDGTELYVSAGVGADEPPLRIYCPPE
                     LAEVDFHP"
     gene            644..2950
                     /locus_tag="VLJ38_02870"
     CDS             644..2950
                     /locus_tag="VLJ38_02870"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSU38474.1"
                     /translation="MLESFGALIYRRRLVTLALSALVLALAIVSLVRGGPLTGGSIEG
                     LEANHAQELVDRVVGRPADTTFLVVFEARPGETLAEPAFASAVSAALEPVRRDAHTLA
                     VVAPEASPPALAEQLLNRPARAALAFVTLRGDFATALASYDGVRRLLDGGKLAVACTG
                     KIPFTHDLNRTLEHDLLKAELVSLPIALLLLFCVFRTLTAAALPVGVGALSVVTGIGI
                     VLALAHEVAIAQYTINVCSLIGLGVAIDYSLFIVSRYREELANGHDYPRALALAVGTA
                     GKVVLFSGSAVGIGLSGLLFFRGSYLFAMGAGGAIVIVLAVVFALTFLPALLAVLGPK
                     IHAGRLRRKPRASHESMWHRTALFVMRRPLTTLIPTLALLLFMGYPFLRLQLVSADVR
                     VLDRSIEARHGFELLRRYFPEQAATRIEAVVEFPAGDALAPERAAALGVWVSDLAKQR
                     GVASVESVLDLVRPLATRAPGPPPSPGASSAGQADPAVLAGLLSAPPPSIAPLIAAGK
                     ALFARDRVTVVHVLCSGAPESREARDIVRFIRAHRQVADGSASVGGQSAADLDAVHFI
                     LARAPYAAAMIVGVTVVVLFFLLHSIVLPLKAVAMNFLSIAGSFGALVWIFQEGHLFV
                     REPRPLEPSLPVLLFCVVFGLSMDYEVLMLSRMKEAHERGADNALAVADGLERSAGLI
                     TSAAAIMVAVFAAFALARVVLIQAVGVGMALAVTLDATLVRVLLVPATMRLFGELNWW
                     APRWLRADDSPRSAPRPRLPHGSTAKAR"
     gene            complement(3001..3474)
                     /gene="dps"
                     /locus_tag="VLJ38_02875"
                     /gene_synonym="pexB"
     CDS             complement(3001..3474)
                     /gene="dps"
                     /locus_tag="VLJ38_02875"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: protein motif:HMM:NF006975.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HSU38475.1"
                     /translation="MYQSPSQLPPEARTQLAKTLNARLADGLDLHSQIKVAHWNIKGP
                     QFAALHPLFETFAVSLAQHNDTIAERAVTLGGKAYGTARHVATSSTLPEYPQDTTRDL
                     EHVKLLAERFEKYLAGARESRTLSEKLGDTDTVDLFTQVVTEFEKHAWFLRASLE"
BASE COUNT          499 a         1241 c         1205 g          667 t
ORIGIN      
        1 cgggttgccg cacgctcggc acggcaactt cgccgtactc ggcaatcacg acctctggct
       61 cgacgcggaa aaaatccgcg cgctgctcgc ggcgagcggc gtcaccacgc tctcgggtag
      121 gtgcacgacc gtgacgctcg cgcgcggcgg cgtgcgactc tgcggcacgg aagcgccctg
      181 gggtccggcg ctccagcgtg ctgccgtcgc gcaaaatgcc ctggaaaagc tgccgctcct
      241 cgtgatgacg cacacgcccg acaacatcta cgcgctgcat gagctcggcg ccgcggcggt
      301 gttcgcgggc catacgcacg gcggccagat gcgactgccc gtgataggcc cgctcctcgt
      361 gccttcgatc tacggccggc gcttcgatct ggggcacttc aacgtcgacg ggaccgagct
      421 gtacgtctcc gcaggcgtcg gcgccgacga gccgccgctc aggatctatt gcccgcccga
      481 actcgctgaa gtcgattttc atccgtaagc gtgcatgcga gttcgcgccg tggcgacttg
      541 gccgtagcaa gctgctgcgt gacaattgac gacaggacac gatgtgaaga acgatcgcta
      601 atccacgtag cgacgaactc gaggcacgga ctatacgtga agggtgctcg aatcattcgg
      661 cgcgctgatc tatcgccgtc gtcttgtcac cctggccctg agcgcgctcg tgctcgcctt
      721 ggcgatcgtg agtctcgttc gcggcggtcc gctcacgggc ggctccatcg agggactcga
      781 agcgaatcac gcgcaagagc tcgtggaccg cgtcgttggg cgacccgccg acacgacgtt
      841 cctcgtcgtg ttcgaagcgc gccccggtga aacgctcgcc gaaccggcgt tcgcatcggc
      901 cgtcagtgcc gcgctcgaac cggtgcgccg cgacgcgcac acactggccg tcgtcgctcc
      961 cgaagcctcg ccgcccgcgc tcgccgagca actcttgaat cgccccgcgc gcgccgcgct
     1021 cgctttcgtc acgctgcgcg gagatttcgc gacggcgctc gccagttacg acggcgtgcg
     1081 gcgcctgctc gacgggggca agctcgccgt ggcctgcacc ggcaagatcc ccttcactca
     1141 cgatctcaat cgcacgctcg agcacgatct gctcaaggcc gagctcgtca gcctacccat
     1201 cgcgctcttg ctcctgtttt gcgtgttccg cacgctgacc gctgctgcgt tgccggtcgg
     1261 cgtcggcgcc ttgtccgtcg tgaccggcat tggcatcgtc ctcgcgctcg cgcacgaggt
     1321 ggcgatcgcg cagtacacga tcaacgtctg ctcgctcatc gggctcggcg tcgcgatcga
     1381 ttattcgctc ttcatcgtga gccgctaccg cgaggagctc gcgaacggcc acgactatcc
     1441 gcgtgccctc gcgctcgccg tcggcacggc gggcaaggtc gtgctgttct ccggctctgc
     1501 ggtcggcatc ggtttgagcg gcttgctctt tttccgcggc tcgtacttgt tcgcgatggg
     1561 cgccggcggc gcgatcgtca tcgtgctcgc cgtcgtcttc gcgctcacgt tcttgccggc
     1621 gctgctcgcc gtgctcgggc ccaagatcca cgctggtcgc ttgcgacgca aaccgcgagc
     1681 gagccacgaa agcatgtggc atcgcacggc gctgttcgtg atgcggcggc cgctgacgac
     1741 cttgatcccg acgctggcgc tgctcttgtt catgggctac ccgttcctgc ggctacagct
     1801 ggtttcagcg gacgtgcgcg tgctcgaccg cagcatcgag gcgcggcacg gcttcgagct
     1861 cttgcggcgt tacttccccg aacaggccgc gacgcgtatc gaagcagtcg tcgagtttcc
     1921 cgctggcgat gcgctcgctc ccgaacgcgc cgccgcgctc ggcgtctggg tgagcgacct
     1981 cgcgaagcag cgcggcgtcg ccagcgtcga aagcgtcctc gacctcgtgc ggccgctcgc
     2041 gacgcgcgcc cctgggcccc caccgagccc tggggcgtcg agcgcgggcc aagcggatcc
     2101 ggcggtgctc gcggggctac tttccgcgcc gccgccgtcc atcgcgccgc tcatcgcagc
     2161 cggcaaagcg ctgttcgcgc gtgatcgagt cacggtggtg cacgtgctct gcagtggggc
     2221 gcccgagagc cgtgaagcgc gtgacatcgt gcgcttcatc cgagcgcacc ggcaggtcgc
     2281 ggacggcagc gccagcgtcg gaggccagtc cgccgccgat ctggacgcgg tgcatttcat
     2341 cctcgcccgc gcgccgtatg cggccgccat gatcgtggga gtcaccgtcg tcgtgctgtt
     2401 cttcttgctc cactcgatcg tgctgccgct caaagcggtg gcgatgaatt ttctgtccat
     2461 cgccgggtcc ttcggagcgc tggtctggat ctttcaggag gggcacctct tcgtgcgcga
     2521 gccgcggccg ctcgagccgt cgctgccggt gctgctcttc tgcgtcgtgt tcggcctctc
     2581 gatggactac gaggtgctca tgctctcgcg catgaaagag gcgcacgagc gcggcgccga
     2641 caatgcgctc gccgtcgccg acggcctcga acgcagcgcg ggtctcatca cgagcgcggc
     2701 ggccatcatg gtcgccgtgt tcgcagcttt cgcgcttgcg cgcgtggtct tgattcaagc
     2761 cgtgggcgtc gggatggcgc tcgcggtgac gctcgacgcg acgctcgtcc gcgtcctgct
     2821 cgtgcctgcg accatgcgcc tcttcggcga gctcaattgg tgggcgccgc gctggctccg
     2881 cgcggacgat tcaccgcgtt ccgcgccgcg cccgcgccta ccgcacggct cgacggccaa
     2941 agcgcggtag gacgcgaacg ctctcggtgc gcacgccgcg cggacgcacg cggggtgaac
     3001 tcactcgagc gaggcccgca agaaccaggc atgcttctcg aattcggtca cgacctgcgt
     3061 gaaaaggtcc acggtgtcgg tgtcaccgag cttctccgag agggtacgcg actcacgcgc
     3121 gcccgcgaga tacttctcga agcgctcggc gaggagcttc acgtgctcga ggtcgcgcgt
     3181 ggtgtcctgc ggatattcgg gcagagtgga cgaggtagcg acgtgacgcg cggtgccgta
     3241 cgccttgccg ccgagggtga cggcgcgttc ggcgatggtg tcgttgtgct gggcaaggct
     3301 gacggcgaag gtctcgaaca acgggtgcag agcagcgaac tgcgggccct tgatgttcca
     3361 atgggcgacc ttgatctgac tgtggagatc gaggccgtcg gcgagacggg cgttgagcgt
     3421 cttcgcgagc tgggtgcgtg cttcaggcgg cagctgactc gggctctgat acatggtgct
     3481 ctcctctgcg gttcaacatg ggaccggcgc ctggcgagca caagcggcaa ctttcgactg
     3541 ctgtgatggc cggtgcctat cgaagcggct aagctcgtgc ttacgatccc gcggtccgga
     3601 tcgctcccct gc
//
LOCUS       DATIML010000165         2420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2342975, whole genome shotgun sequence.
ACCESSION   DATIML010000165 DATIML010000000
VERSION     DATIML010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2342975"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VLJ38_02880"
     CDS             complement(<1..239)
                     /locus_tag="VLJ38_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38476.1"
                     /translation="MSESEPFPFQDPELPVEERVRDLVSRLSLEEKAGQMLHQAPAVP
                     RLGLPAYNWWNEGLHGVARAGIATVFPQAIALAAM"
     gene            complement(241..1185)
                     /locus_tag="VLJ38_02885"
     CDS             complement(241..1185)
                     /locus_tag="VLJ38_02885"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HSU38477.1"
                     /translation="MLTVRPAGALAERAIWIDLRDPTPAERAEIEAATKLRLPERGDI
                     EEIESSSRVYLEDGALYLSTPMLTGDDCLTNPLTAVGFVLSKSQLVTLRFSGIAAFEE
                     VFARSEAKTEQENASDVFLRLLEAVVDHSADALEHAGAELEGISRRAFRADSESAKRH
                     AHTSEHLRGALRSLGRLSDGISHLRDSLLGMGRIGAFVHETGRETHLDGATPRLNAIR
                     GDITSLNDYQAHLAGKVQFLLDATLGFINIQQNDIVKTLTVVSVVGVPPVLIAGIYGM
                     NFKFMPELAWRYGYVYALALIVLSALVPLGWLKWRGWM"
     gene            complement(1227..2264)
                     /locus_tag="VLJ38_02890"
     CDS             complement(1227..2264)
                     /locus_tag="VLJ38_02890"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSU38478.1"
                     /translation="MSRELHPSRLLTRSLALGGERADAKLAVDPSAWQDVLSLLAAVE
                     ELVASRDTDAMLLRSVELARDRLGLERVGLYLRDPREARLIFRGTWGTGAERETTDER
                     GLHYECSAEDYEALRHTQQNGALWLYYEHARHFAEAQDRSTVIGEGWIVATPLVSGGE
                     VVGVMFNDTALSQTPVDPGKQARAAVFCGLIANLFVNRRDGIGWHPLPPDGGELTLAE
                     RAMRSLEQDPVITGERIAEELGISPGHLARSFKAEMGLSLVEYRNRLRIERFLRSVQS
                     GSDNLLKAAREAGFGSYAQFFRVYRKLLGTTPREHLGARRTRAARARHIWHEETGGTG
                     VRLPSRPIRSR"
BASE COUNT          417 a          795 c          810 g          398 t
ORIGIN      
        1 cacatcgccg cgagcgcaat cgcttgcggg aagacggtag cgatgcccgc gcgcgccacg
       61 ccgtgcaagc cttcgttcca ccagttgtag gcgggaagcc cgagccgtgg cacggccggc
      121 gcctggtgca acatctggcc cgctttttcc tcgaggctca ggcgcgacac caggtcgcgc
      181 acgcgctcct ccacgggaag ctcgggatcc tggaacggga agggctcgga ctcggacacg
      241 ctacatccag cctcgccatt tgagccagcc gagcggcacg agcgcgctca gcacgatgag
      301 cgcgagcgcg tacacgtaac cgtagcgcca ggcgagctcg ggcatgaatt tgaaattcat
      361 gccgtaaatg ccggcgatca agacgggcgg cacaccgacc acggaaacga cggtcagcgt
      421 tttgacgatg tcgttttgtt ggatgttgat gaacccgagc gtcgcgtcga gcaggaactg
      481 caccttgccg gcgaggtgcg cctggtagtc gttcagcgac gtgatgtcgc cgcggatggc
      541 gttcaggcgc ggagtcgcgc cgtcgaggtg cgtttcgcgt ccggtttcgt gcacgaacgc
      601 gccgatgcgc cccatgccga gcagcgaatc gcgcaggtgc gagatgccgt cgctcaagcg
      661 cccgaggctg cgcagagcgc cacgcaagtg ctcgctcgtg tgcgcatggc gcttggcgga
      721 ttccgaatcg gcgcggaacg ctcggcgtga aatgccctcg agctccgcgc ccgcgtgctc
      781 gagcgcgtcg gccgagtgat cgactacggc ctcgagcaag cgcaggaaca cgtcgctcgc
      841 gttttcttgc tccgtcttgg cctccgagcg cgcgaacact tcctcgaacg cggcgatccc
      901 ggagaaacgt agtgtcacga gttggctctt cgagagcacg aagccgacgg ccgtgagcgg
      961 gttcgtcaag cagtcgtcgc ccgtgagcat gggtgtcgag agatagagcg cgccgtcttc
     1021 gaggtagacg cgactcgacg actcgatttc ctcgatgtcg ccgcgttcgg gcaaccgcaa
     1081 cttggtggcg gcctcgatct cggcgcgctc cgcgggcgtc ggatcgcgca gatcgatcca
     1141 gatcgctcgc tcggccagcg ccccggcggg tcgcaccgtc agcatcgctc gctcatcgag
     1201 gcgagcatgt tagcaagcag gtcgagctat cgcgaccgga ttggccgact cggcaggcgg
     1261 acaccggtgc cgcccgtctc ttcgtgccaa atgtggcgag cgcgggcggc gcgggtgcgg
     1321 cgcgcgccga ggtgctcgcg cggcgtcgtg ccgaggagct tcctgtacac gcggaagaac
     1381 tgcgcgtagc tgccgaagcc cgcctcacgc gcggccttca acaaattatc gcttccgctt
     1441 tgcacggagc gcaggaaacg ctcgatgcgg agccgatttc tgtactcgac gagcgagagg
     1501 cccatttcgg ccttgaacga gcgcgcgagg tggccggggc tgatgccgag ctcttccgcg
     1561 atgcgctcgc cggtgatcac gggatcttgt tcgagcgagc gcatcgcgcg ctccgcgagc
     1621 gtgagctcac cgccgtccgg cggcagcggg tgccagccga tcccatcgcg acgattgacg
     1681 aacaggttcg ctatgaggcc gcagaacacc gcggcgcgcg cctgcttgcc gggatcgacc
     1741 ggggtttgtg agagcgccgt atcgttgaac atcacgccga ccacttcgcc gccggaaact
     1801 agcggcgtcg cgacgatcca gccctcgccg atcacggtgc tgcgatcctg cgcttcggcg
     1861 aaatgacgcg cgtgctcgta gtaaagccag agcgcaccat tttgctgagt gtggcgcagg
     1921 gcctcgtaat cctccgcgct gcactcgtaa tgcagcccgc gctcgtccgt cgtttcgcgc
     1981 tccgcgcccg tgccccaggt gccccgaaaa atcagccgcg cctcgcgcgg gtcgcgcagg
     2041 tagagcccaa cgcgctcgag gcccaagcgg tcacgtgcga gctcgaccga acgcaggagc
     2101 atcgcgtccg tatcacgtga cgcgacgagc tcttcgactg ctgcgagcag cgagagcacg
     2161 tcctgccaag ccgacggatc aacggcgagc ttcgcgtcgg cgcgctcgcc cccgagagcg
     2221 agcgaacgag tcaggagacg actgggatga agctcgcggg acatgggtcc actggccgcc
     2281 ggtgtcatac cccaatgcgg gcctagcagc gaagcgcatt ttccgcgcct cgcgtagggt
     2341 aaagttgata aaacacgctg ccctcacacg ccttttatgc aaacgctgtg caaggccgtg
     2401 aaagctgagc gcctgcagcg
//
LOCUS       DATIML010000166         1848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5521222, whole genome shotgun sequence.
ACCESSION   DATIML010000166 DATIML010000000
VERSION     DATIML010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5521222"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1775)
                     /locus_tag="VLJ38_02895"
     CDS             complement(<1..1775)
                     /locus_tag="VLJ38_02895"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU38479.1"
                     /translation="MLKELFHACAEERRARLVSVVGMAGVGKTRLGWEFEKYTDGLVD
                     DVLWHRGRCLAYGDGVAYWALAEMVRMRAQISEDESVDSAVPKLRESLAAFVTDPDER
                     AFLEPRLAHLLGLAERNARDKEDLFSAWRLFIERMAAVDPVVLVFEDLQWADAGLLDF
                     IEYLLDWARNHPIYVVTLARPELAERRSGWGVGRHDFTSLFLEPLEPRVMETLLAGTV
                     PGLPGELGDRIVAHADGIPLYAVEIVRMLLDRNLLKRDGEEYRPAGPIETLAIPETLQ
                     SLAAARLDTLEPEERRLLEDASVLGRTFTRAGLAAVADRSDDELEPHLQSLLRKEILT
                     RQLDPLSPERNQLAFLQDILRRVAYETLSLHDRKQRHLAAAAHLARAADDDIAAVLAA
                     HYLDAYQLGPNDGDADELRGLARVALVRAGERASSLASAGEAARYFQRAADLADGPLE
                     RAELLERTGREWGKDLEIDAAERALVEAGRLLTEQGERHAAARVATRLAEVLRTVDRV
                     NEALELMRPAYDELIGGERSPEVALVAAQLARIAYFAGEREFALATTEVALDLGEVMR
                     LPEVLAEALNTKATLIYHRPHEAGAL"
BASE COUNT          306 a          635 c          631 g          276 t
ORIGIN      
        1 agtgcgcctg cctcgtgagg gcggtggtag atcaaagtcg ccttcgtgtt gagcgcttcc
       61 gcgaggactt cgggcaggcg catcacttct cccaagtcga gcgcgacctc ggtcgtggca
      121 agcgcgaact cgcgctctcc ggcgaagtac gcgattcgag cgagctgcgc ggcgacgagt
      181 gcgacctccg gcgatcgctc tccgccgatc agctcgtcat acgcggggcg catcaattcc
      241 agcgcctcgt tgacgcgatc aacggtccgt agtacctcgg cgagacgcgt ggcgacgcgc
      301 gcagcggcgt ggcgctcgcc ctgctcggtg agcaagcggc ccgcctcgac aagcgcgcgc
      361 tcggcggcgt cgatttcgag gtccttgccc cactcgcggc ccgtgcgctc gagcagctcc
      421 gctcgctcca acggaccatc ggcgagatcg gctgcccgct ggaagtaacg cgctgcctcg
      481 ccggcggagg ccaacgagct cgcgcgctcg cccgcgcgga caagcgcgac ccgtgcgagg
      541 ccgcgcaact cgtcggcgtc gccgtcgttc ggcccgagct ggtaggcgtc gaggtagtgg
      601 gcggcgagaa ccgcggcgat gtcatcgtcg gcggcacgcg ccagatgcgc tgcggcagcg
      661 agatggcgct gtttgcggtc gtgcagcgag agcgtctcat aggccacgcg gcgcaggatg
      721 tcctgcagaa aggcgagctg gttgcgctca ggggagagag gatcgagctg ccgcgtcaga
      781 atctctttgc gcaagagcga ttggaggtgc ggctcgagct cgtcgtcgct acggtcggca
      841 accgcggcga gcccggcacg cgtgaaggtg cggccgagca ccgatgcatc ttcgagcagt
      901 cgtcgctcct caggttcaag agtgtccaac ctcgctgcag caagagattg caaggtctcg
      961 gggatcgcga gcgtctcgat cggcccggcg ggccgatact cctcgccgtc gcgcttcaac
     1021 aggttgcggt cgagcagcat gcgcacgatc tcgacggcat aaagcgggat gccgtcggcg
     1081 tgcgcgacga ttcggtcccc cagctcgccc ggcaggccgg gcacggtgcc cgccagcagc
     1141 gtctccatca cccgcggctc gagtggctcc aagaacagcg acgtaaaatc gtggcggccg
     1201 acgccccatc ccgagcggcg ctcggcgagc tccggccgcg cgagcgtgac gacgtagatc
     1261 gggtggttgc gcgcccagtc gaggaggtac tcgatgaagt cgagcaggcc ggcatctgcc
     1321 cattgcagat cctcgaagac gagcacgacg gggtcgaccg cggccatgcg ctcgatgaag
     1381 agccgccacg ccgaaaacaa atcttccttg tcgcgcgcgt tacgctcggc gaggccgagc
     1441 aggtgtgcaa gccgtggctc gagaaacgcg cgttcatccg gatccgtgac gaacgccgca
     1501 agcgactcgc ggagcttcgg caccgcgctg tcgacgctct cgtcctcgga tatctgcgca
     1561 cgcatgcgga ccatctcggc gagcgcccag taggcgacac cgtcgccgta ggcgaggcaa
     1621 cggccacgat gccagagcac atcgtcgacg aggccgtcgg tgtatttctc gaactcccaa
     1681 ccgagacgcg tcttgcccac gccggccatg ccgacgaccg agaccagccg cgcgcgccgt
     1741 tcctccgcgc acgcatgaaa gagctccttc agcagccgga actcccgctc gcgaccgacg
     1801 aagggcggct cgagccccgc tgtcctgccg ccgccacgcc gcgcggca
//
LOCUS       DATIML010000167         3038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_899865, whole genome shotgun sequence.
ACCESSION   DATIML010000167 DATIML010000000
VERSION     DATIML010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3038
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_899865"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1568
                     /locus_tag="VLJ38_02900"
     CDS             <1..1568
                     /locus_tag="VLJ38_02900"
                     /inference="COORDINATES: protein motif:HMM:NF013050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38480.1"
                     /translation="DSKLRDGGFTLFYMGINLGAALSPLLCGYIGETYGWHYGFGLAT
                     IGMLSGLVTFVMPTRVAQTLILGCSLVTAVALVVLRPDNPLSFGVNLLVGAALLAAAV
                     IGAVALARGGLPASAGLPPDPARLRERVGPISREWLVYLGAVACLPIFALLVSGFSLF
                     TRDHAPVALLSREAVAALAHSKSAFSQILAVVAAEVSKPAGLVLSVTGCISLAYVARQ
                     MLKLDSLARERLLVVLVLTFFSMLFWAFFEQAGSSINNFTDRNVDRVTEHRHVGTADI
                     GRTIDLSPTQEQIGYRNGDALFTMKDLDELRARHEKEPDFRIPWRVTAEDVNMGIAER
                     ADEVPASVFQAANAGFILIFGLVLTALWGALARRKLEPSTPAKFALGLAQLSLGFGAL
                     WYGAQTSTQRGMVAAAWLILGYLFHTTGELCLSPVGLSMITRLTPKLLVSTMMGNWFL
                     ASAFAQYLAAIISQFTGVAEGDREPHIPIPVETVHVYGDVFGKIAIASMVGAAICFAL
                     TPWLRRSMHEENA"
     gene            complement(1874..2557)
                     /locus_tag="VLJ38_02905"
     CDS             complement(1874..2557)
                     /locus_tag="VLJ38_02905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38481.1"
                     /translation="MQLALHAKTNPVALWIVSNGEITIGPVRTELLLRGIRHGRVPLD
                     CQVRAAGSDEWRPLESLREVVALQGHSGATGEFQRAAADIAAARDEREVLLFLLQGAA
                     RATRATQGLVHRQRPPVEWPVTSYSYGGLEDSLGQVISYLDPAYLLAVGGQTLAGCPT
                     DGLAERVVAERLGDDGLAGIIMVPVTHGTELAAMLELGRPDRPFRLGDVDGLSRLATL
                     AVARLEELG"
     gene            complement(2581..2970)
                     /locus_tag="VLJ38_02910"
     CDS             complement(2581..2970)
                     /locus_tag="VLJ38_02910"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HSU38482.1"
                     /translation="MSLKIYPVVLELVRRLAPLVRVLRARSSVLADQMERALISVPLN
                     TAEGAYSRGRNRQARFQSAAASARETLACLETAEAMGFIGPIEPELVALFNRVIGTLV
                     RLVEPRRCARFVGPVTPHLDNGLTRVL"
BASE COUNT          491 a         1074 c          941 g          532 t
ORIGIN      
        1 cggacagcaa gctgcgcgac ggcggcttca cgctgtttta catgggcatc aacctgggtg
       61 ccgcgctgtc tccgctgctc tgcggctaca tcggcgagac gtacggctgg cactacggct
      121 tcggcctcgc gacgatcggt atgttgagcg gcctcgtcac gttcgtcatg ccgacgcgcg
      181 tcgcccaaac gctcatcctc ggctgctcgc tcgtcacggc cgtcgcgctc gtcgtgctcc
      241 gtcccgacaa tccgctctct ttcggcgtga acctcctcgt cggcgccgcg ctgctcgccg
      301 cggccgtgat cggtgccgtg gcgctcgcac gcggcggact gccggcgagc gccggactgc
      361 cgccggatcc cgcgcggctg cgtgaacgcg tcggtccgat ctcacgcgaa tggctcgtct
      421 acctcggcgc cgtcgcgtgc ttgccgatct ttgcgctgct cgtctcgggc ttttcactct
      481 tcacccgcga tcacgcgccc gtcgcgctgc tgtcgcggga ggccgttgcc gcgctggcgc
      541 acagcaagag cgcgttctcg cagatcctcg ccgtcgtggc ggcggaggtc agcaaaccgg
      601 ccggcctcgt gctcagcgtg accggctgca tttcgctcgc ttacgtcgcg cggcagatgc
      661 tcaagctcga cagcctcgcg cgcgagcggc tcctcgtcgt gctcgtgctc accttcttct
      721 cgatgctctt ctgggcgttc ttcgaacaag cggggagctc gatcaacaac tttaccgatc
      781 gcaacgtcga ccgcgtcacc gagcaccggc acgtcgggac tgcggacatc ggtcgcacga
      841 tcgacctttc cccgacgcag gaacagatcg gctaccgcaa cggcgacgcg ctcttcacga
      901 tgaaggacct cgacgaactc cgcgcccgtc acgaaaaaga gccggatttc cgcatcccgt
      961 ggcgcgtgac cgccgaagac gtgaacatgg gcatcgccga gcgcgccgac gaagtaccgg
     1021 cgagcgtctt tcaagccgcc aatgccggct tcattctgat cttcggcttg gtgttgaccg
     1081 cgctctgggg tgccctcgca cggcgtaagc tcgagccgag cacgcccgcg aagttcgcgc
     1141 tcggcctcgc ccagctctcg ctcggtttcg gcgcgctctg gtacggagct cagacctcaa
     1201 cgcagcgcgg catggtcgcc gcggcgtggc tcatcctcgg ttacctcttt catacgacag
     1261 gagagctctg cctgtcgccg gtcggcctga gcatgatcac gcgcctgact ccgaagctac
     1321 tcgtgagcac gatgatgggt aactggtttc tcgcgagtgc gttcgcgcaa taccttgccg
     1381 cgatcatttc tcagttcacc ggcgtcgccg aaggcgaccg tgaacctcac atcccgatcc
     1441 ctgtcgaaac ggtgcacgtg tacggggacg tgttcggcaa gatcgcgatc gcctccatgg
     1501 tgggcgccgc gatttgtttc gcactcacac cgtggctgcg tcgctccatg catgaagaga
     1561 acgcatgaag cgaactgaaa gctctcggcg atgtcacggc ctcgtttcgc aaccgcttct
     1621 gctatttcat ctttgaaagt agaagcggcg tggaacacgt gtaacccatc gaacctaggt
     1681 gacaaatgcc ctggcacggt gagtgcatta tctcgcgctc gaaggcggcg cccttggtgc
     1741 ccccccctcc gcctcggtcg ccgcctcctt aacaacccag cggcctggag cctcccctag
     1801 ctccgggccg ttgccttttt gtcagtgccg aatcgacggt gctcgaccga gcccgcgcgc
     1861 ttgcctggaa aaatcagccg agctcctcga gccgcgccac ggcaagcgtc gcaagccgac
     1921 tgagcccgtc gacgtcgcct aagcgaaacg gccggtccgg cctaccgagc tcgagcatcg
     1981 cagcgagctc ggtgccgtgc gtcacgggca ccatgatgat gccggcgagc ccgtcgtccc
     2041 cgagccgctc ggccacgaca cgttccgcca agccgtccgt cgggcagcct gcgagcgtct
     2101 ggccaccgac ggcgagcagg tacgccgggt cgaggtacga gatgacttgg ccgaggctat
     2161 cctcgagacc gccgtacgag tacgacgtga ccggccattc cacgggcggg cgctgccggt
     2221 ggacgagccc ctgcgtcgcg cgcgtcgccc gggcggctcc ctggagcaaa aagaggagca
     2281 cttcgcgttc gtcgcgggcc gccgcgatat cggccgcagc gcgctgaaac tcgcccgtcg
     2341 caccgctgtg accctgcagg gccacgactt cccgcagact ttcgagcgga cgccattcgt
     2401 cggaccccgc cgcgcgcacc tgacaatcga gcggtacgcg gccgtggcga attcctcgca
     2461 aaagcagctc ggttcgcacg ggtccgatcg tgatctcgcc gttcgacacg atccacaggg
     2521 ccacggggtt cgtcttggcg tgcagggcca actgcatgag tgtctcctag gctgcccgga
     2581 tcagaggacc cgggtcagcc cattgtcgag atggggcgtc actgggccaa caaagcgggc
     2641 gcaacgccgc ggctcgacca gccgcacgag cgtaccgatc acgcgattaa agagcgccac
     2701 gagctcgggc tcgatgggcc cgatgaagcc catcgcctcg gcggtttcca agcacgcgag
     2761 cgtctcccgc gccgaagccg cggctgactg aaaccgcgcc tgccgattcc tcccgcggct
     2821 gtaggcgccc tccgccgtgt tgagcggcac gctgatcaga gcccgctcca tctgatccgc
     2881 gagcaccgag ctgcgagcgc gcaggacccg aacgagcggc gcgagacgac gaacgagctc
     2941 gagaacgaca ggataaatct tgagcgacat gatgttcctc ctgtccccat ccttcgagga
     3001 ccccaaaccc ccgcaggcgc gcgcaggccg gctcaagg
//
LOCUS       DATIML010000168         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5521381, whole genome shotgun sequence.
ACCESSION   DATIML010000168 DATIML010000000
VERSION     DATIML010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5521381"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(355..1557)
                     /locus_tag="VLJ38_02915"
     CDS             complement(355..1557)
                     /locus_tag="VLJ38_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSU38483.1"
                     /translation="MGPAKSAGGIVYATAAGANVIDVDGNRYVDLAAGFGAELVGHRH
                     PRVLRALALQSERLLHALGDVHPSDAKIALVERLALLHPEPEAQALVGQSGSDAVSAA
                     LKTALLATGKPGVLAFAGAYHGLGYGPLAACGLRPSYRTPFAAQLNPAVIFVPYPDTL
                     ERAADAVAEAARALAAGEIGAVLIEPVLGRGGVVVPPAGFLAELGRLAHGAGALLVAD
                     EIWTGLGRSGAMLASVAAGARPDLICLGKGLGGGLPLSAVIGRRSVLAAWRQADEVVD
                     TSTFAGAPLACTTALATLEVLGREKLVGRSAELGASWREELARAFTSTPDVSVRGAGL
                     MLGIDLGARPGAALAALRSLLEQGFIASTGGGQREVIVLTPPLTIAEPQLRAATSAIV
                     RAVKESLA"
BASE COUNT          270 a          604 c          609 g          232 t
ORIGIN      
        1 cgcggccgcc gcggccgttt cggcttgcgc ggggctcacc gtgaagatcg cgaaaagagt
       61 agtgaaacca agccagcgtc tcagcatgaa catcggtcaa tagcgccgat cgagcggatc
      121 gtcttgaccc gaatgggcgc cgcaggcgac aacgcgaaca ccgcggagca cgatgaggag
      181 cagcgcgccc cgtgcccagt cctggaatat ccctcgtttg ccgctctgcc aggagcgccg
      241 actggtcttc gtgtgcaaat tccctccgcg cgttcgtcag gttgccggtg tcatacactc
      301 tcaccctatt tcagcgcgtg caagcggcgg agtgtgcgac cgctccagtc gagactacgc
      361 cagcgactct ttcacggccc ggacgatggc gctggtcgcc gctcgtagct ggggttctgc
      421 gatcgtgagc ggcggcgtga gcacgatgac ctcgcgctgt ccgccgcccg tcgacgcaat
      481 gaagccctgc tcgagcagcg accgcagcgc ggcgagcgcc gcgcccggac gcgccccgag
      541 atcgataccg agcatcaggc ccgcgccgcg cacgctcacg tccggcgtgc tcgtgaacgc
      601 acgagcgagc tcctcgcgcc agctggcacc gagctccgct gaacggccga cgagcttctc
      661 gcgcccgagc acctcgagcg tcgcgagcgc cgtggtgcac gcgagcggcg ccccggcgaa
      721 cgtcgacgtg tcgaccacct cgtccgcttg ccgccacgcc gccagcacgc tgcgccggcc
      781 gatgacggca ctcagcggca agccgccgcc gagccccttg ccgagacaaa tcaagtcggg
      841 tcgcgcgccg gccgcaacgc tcgcgagcat cgcgccggaa cgcccgagcc ccgtccaaat
      901 ctcgtcggcc accaagagcg cgcccgctcc gtgcgcgaga cggccgagct cggcgagaaa
      961 tcccgcgggc ggcaccacga cgccaccacg cccgagcacc ggctcgatca gtaccgcgcc
     1021 aatctcgccc gcggcgagcg cgcgcgcggc ttcggcaacc gcgtcggctg cccgttcgag
     1081 cgtgtcggga tacggcacga agatcacggc cgggttcagc tgcgcggcga agggcgtgcg
     1141 gtagctcggc cggagcccgc acgccgcgag cgggccgtag ccgaggccgt ggtacgcgcc
     1201 cgcgaacgcg agcacccccg gcttgccagt cgcgagcagc gccgtcttga gcgcggcgct
     1261 cacggcgtca gagccggatt gaccgacgag ggcttgcgct tcgggttcgg ggtggagcag
     1321 ggcgagacgc tcgacgagcg cgatcttcgc gtcggacggg tgcacgtcgc cgagcgcgtg
     1381 caggagtcgc tcgctctgga gcgcgagtgc gcggagcact ctgggatgac ggtgcccgac
     1441 gagctcggcg ccgaaaccag ccgccagatc gacgtagcgg ttaccatcga cgtcgatgac
     1501 gttggcgccc gcggcggtgg cgtagacgat tccgccggcg ctcttggcag ggcccatcgg
     1561 cgcggccgcg tggcgatgcc gcagaagaaa cgtgcgcgag tgctcgcccg gtggtcgtgt
     1621 gacgatgagc gggagctcgt ctccggaagg ggtcgagtcg gggtgcacgg ttcgagtcga
     1681 gggaggggcg tgctacgagc agacgcggtt tcggc
//
LOCUS       DATIML010000169         4825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1766807, whole genome shotgun sequence.
ACCESSION   DATIML010000169 DATIML010000000
VERSION     DATIML010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4825
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1766807"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VLJ38_02920"
     CDS             <1..395
                     /locus_tag="VLJ38_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38484.1"
                     /translation="VMSESAARYERLPASGGRVAVKLLPNPLAPSHDVFDAGRNSPEG
                     TRERFTLDGIHPNEPVTLVFRAAPVADLDVPVLIDGTPAGSVHLPRTDGWVEVELRLP
                     PLEHSRVRVELGGSGERVLYHVWAVQGR"
     gene            398..2371
                     /locus_tag="VLJ38_02925"
     CDS             398..2371
                     /locus_tag="VLJ38_02925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38485.1"
                     /translation="MGPLLELGPSRDPVGLCALALGLVLLLAGILRRDACRAWLTRGP
                     SVWWVGGCALVAALLSAGYVVYFLRGGPRIIDATSYFLEARTFAAGKLAFAVPEPTGA
                     FRGRFSVLGPHGLAVIFPPGYPLALALGFRFGAPLAVGPLLAALLVAATYRAAKELEL
                     GEMTARLAALLSLLCAALRYHTADTMSHGLSALLLVVSVTAALRPEPRRVVLAGLLSG
                     WLCATRPMTGIVAVTIVGALVTLRSAPRRRLHLLVTAVASLLPGLALIAYYQRAATGS
                     FFHSTQLAYYALADGPPGCFRWGFGAGIGCRFEHADFVKKHLEHGFGLTSALYVTAER
                     LLWHSFDVANLAPLALALPWFIGQAWENHAVRWAAATILLVILAYLPFYFPGSYPGGG
                     ARLLADALPLEHVLVAGAVTRLGLAAVTPGLVLLGFALSTVHAHVALRDREGGHPMFD
                     AGLLASRQVTHGLVWVESDHGFALGHDPSAQDPKSSIVVARLRGDAHDRALWENLGRP
                     ASFRYGYSVATGNSSLNKFEPPAERWRWEAEAEWPLLSATAGWAHPDFAACLSAGGGL
                     RVRPTPNAALEIELGAPRRDRYALTIGWLANAGARLSLRVREQTVTVVHETDGCEASP
                     IAAIALETVNRVALATSSALVLDYLELTGVAAK"
     gene            2452..2769
                     /locus_tag="VLJ38_02930"
     CDS             2452..2769
                     /locus_tag="VLJ38_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HSU38486.1"
                     /translation="MTKSELIEAIAARGELTKARAELVVNCVFEAMTEALQKGEGIEI
                     RGYGSFTVRPYKPYAGRNPRTGQPVPVPAKRLPFFKVGKELKELVNGSRHIPISGGSD
                     SDD"
     gene            2780..3787
                     /locus_tag="VLJ38_02935"
     CDS             2780..3787
                     /locus_tag="VLJ38_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38487.1"
                     /translation="MLRGASRCTLGIVALVTACRPAPPQPAAKLHDAAPPLAPLEYVP
                     AAGLRWLITAQPAKILVDPALAAAMGELLPPDRVDAFASATGVQPRALGETIVAGYDL
                     GTLYVTALAAGDGGRARARFEARLSNGAIVKHPHPQLYRIVGTRDGTPQALVSVNDQL
                     LAFAVGDLTLARVAEAYAERRLKSPTALHGAALSTLPAIDRPLAALYAPGPFTGAWSR
                     AASGLLSGALAVVVAIHANEPGGLAFEIIATGDWPESGTDSRMAAAWAELTTSATGRL
                     LGLDQAKNLKSVAHLHELTWSGELPIAPLVAGLRAATIANVPEIFGVHAADTAGPPDK
                     P"
     gene            4058..4591
                     /locus_tag="VLJ38_02940"
     CDS             4058..4591
                     /locus_tag="VLJ38_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HSU38488.1"
                     /translation="MQSSSLNASVTTTHAHYTFKVGDMAVHPAHGVGEVERMEERDFG
                     GRMTACYVIKIRDTGLKVMIPTEAVERVGLRPVMKKKEAQKILDILKAPEVAVDVQPW
                     NRRFRAYTEMLKSGLPSEIAKVLRDMYRLKFDKDLSFGERRLLDQARSLLVQELALAR
                     KVAPAAMEGEIQQIFSA"
     gene            4649..>4825
                     /locus_tag="VLJ38_02945"
     CDS             4649..>4825
                     /locus_tag="VLJ38_02945"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF014033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_process: GO:0009235 - cobalamin metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP:cob(I)alamin adenosyltransferase"
                     /protein_id="HSU38489.1"
                     /translation="MKIYTRTGDAGMTGLFGGGRVDKDAARVEAYGSVDELNACIGAV
                     RATLVASELDGALAA"
BASE COUNT          744 a         1678 c         1582 g          821 t
ORIGIN      
        1 acgtgatgag cgagtcagcc gcacgctacg aacggctgcc cgcgagcggc ggtcgcgtcg
       61 ccgtgaagct cctgccgaac ccgctggctc cgtcgcacga cgtgttcgac gcgggtcgca
      121 acagtcccga gggcacgcgc gagcgcttca ccctggacgg catccatccg aacgagccgg
      181 tcacgctcgt cttccgcgcc gcacccgtcg ccgacctcga cgtgcccgtg ctcatcgacg
      241 gcactccggc cggcagcgtc cacctaccgc gtaccgacgg ctgggtcgaa gtcgagcttc
      301 gcctcccccc cctcgagcat tcgcgcgtgc gcgtcgagct cggcggttcc ggcgagcgcg
      361 tgctctatca cgtgtgggcc gtgcaagggc gctgagcatg ggcccactcc tcgagctcgg
      421 accgagccga gatccggtgg gactctgcgc gctcgccttg ggactcgtgc tgctcctcgc
      481 gggcattctg cgccgcgacg cgtgtcgggc gtggctcacg cgcggcccta gcgtgtggtg
      541 ggtcggcggc tgcgcgctcg tggccgcgct cttgtcggcg ggctacgtcg tctatttttt
      601 gcgggggggt ccgcggatca tcgacgccac gagctatttt ctcgaggcgc gcacgttcgc
      661 tgccggcaag ctcgcctttg ccgttccgga gccgacaggc gcctttcgcg ggcgtttttc
      721 tgtcctcggc ccgcacggcc tcgccgtcat cttccctccg ggttacccgc tcgcgctcgc
      781 gctcggcttt cgtttcggcg cgccgctcgc cgtggggccg ctgctcgcgg cgctgctcgt
      841 cgccgcaacg taccgcgcgg ccaaggagct cgagctcggt gaaatgaccg ctcgacttgc
      901 agcgctgctc tccctgctct gcgccgcact tcgctatcac acggctgaca ccatgtcgca
      961 cggcctgagt gccttgctcc tcgtcgtgag cgtcacggcc gcactccgcc ccgagccgcg
     1021 ccgggtcgtg ctcgccgggc tactgagcgg atggctctgc gcgacgcgac ccatgaccgg
     1081 catcgtcgcc gtcaccatcg tcggcgcgct cgtgacgttg cgcagtgcgc cacgccgtcg
     1141 tctgcacctg ctcgtgacgg ccgtcgcgtc actgctccct ggcctcgcac tcatcgcgta
     1201 ctaccagcgg gccgcgacgg gttcgttctt tcactcgacg cagctcgcct actacgcgct
     1261 cgccgacgga ccgcccggct gctttcgctg gggcttcggc gctggcatcg gttgccgctt
     1321 cgagcacgcc gatttcgtaa agaagcacct cgagcacggc ttcggcctca cgtccgcgct
     1381 gtatgtcacg gctgagcggt tgctctggca ctccttcgac gtcgccaatc tcgcgcccct
     1441 cgccctcgcc ctgccctggt tcattgggca ggcgtgggaa aaccacgcgg tgcgctgggc
     1501 ggcagcgacg attctgctcg tcatcttggc gtatctgccc ttctactttc caggcagtta
     1561 cccgggcggc ggcgcgcggt tgctggccga cgcgctcccg ctcgagcacg tcctcgtcgc
     1621 tggcgccgtc actcgactcg ggctcgccgc cgtcaccccg gggctcgtcc tgctcggctt
     1681 cgcgctcagc accgtgcacg ctcacgtggc gcttcgcgac cgcgaaggcg gccacccgat
     1741 gttcgacgcc ggcctactcg ccagtcggca ggtgacgcac ggtctcgtct gggtcgagag
     1801 cgaccacggt ttcgcgctcg ggcacgatcc gtcggcgcaa gatcccaaga gttcaatcgt
     1861 cgtcgcgcgg ctccgcggtg acgctcatga tcgcgcgctt tgggaaaacc tcggccggcc
     1921 ggcgtccttc cgctacggct actccgtcgc cacgggcaac tcctccttaa ataagttcga
     1981 gccgcccgcc gaacgctggc gttgggaagc ggaagccgag tggccgctgc tgtcggctac
     2041 tgcggggtgg gcgcaccccg atttcgccgc atgcctctcc gcgggtggag gactgcgcgt
     2101 gcgaccgacg ccgaacgccg cgctcgaaat cgagctcggc gcgcctcgac gtgaccggta
     2161 cgcgctgacc atcggctggc tggccaatgc gggggcacgc ctgagcctgc gcgttcgcga
     2221 gcagacggtg accgtagtgc acgagaccga cgggtgcgag gcaagcccca tcgcggcgat
     2281 cgcgctcgag acggtaaacc gggtggcgct cgcgacgagc agcgcgctcg tactcgacta
     2341 cctggagctc acgggtgtcg ccgcgaaata gcgttgacag ttcagacgtt aggtttgacc
     2401 atacctactc ccaggggcga gagggccctc cttttcggga agctgagctg gatgacgaag
     2461 agcgaactca tcgaagccat tgctgcccgg ggcgagctca ccaaagcgcg cgctgaactc
     2521 gtggtcaact gcgtgttcga agcgatgacg gaagcactgc agaaggggga aggtattgaa
     2581 atccgcgggt atggcagctt caccgtgcgt ccctacaaac cgtacgctgg ccgtaatccg
     2641 cgcaccggcc aaccagttcc ggttcctgcc aagcgcttgc ccttcttcaa ggtcggcaag
     2701 gagctgaaag aactcgtgaa cggaagccgg catattccga tcagtggcgg cagcgacagc
     2761 gacgactgac gcgcgtcacg tgcttcgcgg cgcgtcacgc tgcacgctcg gtatcgtcgc
     2821 gctcgtcacg gcgtgtcgac cggcgcctcc ccaaccggcg gcgaagctgc atgatgctgc
     2881 accgccgctc gccccgctcg agtacgtgcc ggcggccggg ctccgctggc tcatcaccgc
     2941 gcagccagcc aaaattttgg tggatcccgc gctcgctgcc gcaatgggag agctcttacc
     3001 gcccgaccgc gtcgatgcct tcgcgagcgc gacgggagtg cagccacgag cgctcggcga
     3061 gaccatcgtc gcgggctatg atctcggaac gctttacgtt accgcgctcg ccgcgggcga
     3121 cggtgggcgc gcccgcgcgc gtttcgaagc gcggctctcg aacggggcca tcgtcaagca
     3181 cccgcaccct cagctctatc gcatcgtcgg cacgcgggat ggaacgccgc aagcgctagt
     3241 ctccgtcaac gaccagctgc tagcgttcgc ggtcggcgat ctcacgctcg cgcgcgtcgc
     3301 ggaggcatac gccgaacgtc gtctaaagtc gccgaccgcg ctgcacggcg ccgcgctctc
     3361 gacgctgccc gccatcgacc ggccgctcgc cgctctttat gcgccggggc cgtttacggg
     3421 cgcttggagt cgggccgcct ccggactcct tagcggcgcg ctcgccgtcg tggtggcgat
     3481 ccacgcgaac gagcccggcg ggctggcctt cgagatcatc gcaacgggcg attggccaga
     3541 gagcggtacc gattccagaa tggctgcggc ttgggcggaa ctaacgacca gtgccacggg
     3601 gcggctcctc ggcctggacc aagccaagaa tctcaagagt gtcgcgcacc tacacgagct
     3661 tacatggtcc ggtgaattgc caatcgcgcc gctcgtggcc ggcctgcgag cggcaacgat
     3721 agccaatgtc cccgaaatat ttggcgttca cgccgccgac acggccggcc caccagacaa
     3781 accctgaccc ggtcgccgag ccggtcaccc gaccagccgt gaaagtctag cgatttccgg
     3841 cgactgtgac gcgattcgat tgcgcagcac aattgacctt ttgggatgga gagtgatacg
     3901 aatcccgccg tgctgcaccg cataggtcgg aacggaggct aactcggccc aagcgtacga
     3961 cccggggcag cagcagacag accgagacgg atactccgtc acggcacagc ggaataacgc
     4021 cccgcgccag cgaacggctg gggctcgagg aggcggaatg caatcgtcgt cgttgaatgc
     4081 ttcggtgacc accacccacg cccattacac cttcaaggtt ggggacatgg ctgtccaccc
     4141 cgcgcacggc gtgggcgaag tggagcgcat ggaggagagg gatttcggcg ggcgcatgac
     4201 cgcctgttac gtcatcaaga tccgggatac cggcctcaag gtgatgatcc ccacggaagc
     4261 ggtcgagcgc gtcggcctcc ggcccgtgat gaagaagaag gaagcgcaga agatcctcga
     4321 catcttgaag gcgcccgagg tggccgtaga cgtgcagccc tggaaccgcc ggttccgcgc
     4381 ctacaccgag atgttgaaga gcggcctccc ctctgagatc gccaaggttc tccgggacat
     4441 gtaccgcctg aagttcgaca aggacctttc gttcggtgag cggcgcttgc tcgatcaggc
     4501 ccgcagcctg ctcgtgcagg agcttgccct cgcgcgcaaa gtggccccgg cggcgatgga
     4561 aggcgaaatt cagcaaatct tctcggcgta aaagtcgcgc cgagacggcg atcgcttgcc
     4621 cgacgtggca aggtcggcgg ggtcgcgcat gaagatctac acccgcacgg gcgatgccgg
     4681 catgaccggc ctattcggcg gcgggagggt cgacaaggac gcggcgaggg tcgaagccta
     4741 cggctccgtg gacgagctga acgcctgcat cggggccgtg cgggcgacgc tcgtcgcaag
     4801 cgagctcgac ggggcgctcg ccgcc
//
LOCUS       DATIML010000170         1786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_900087, whole genome shotgun sequence.
ACCESSION   DATIML010000170 DATIML010000000
VERSION     DATIML010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_900087"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VLJ38_02950"
     CDS             complement(<1..371)
                     /locus_tag="VLJ38_02950"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HSU38490.1"
                     /translation="MTTTAIDDVLSSSAAALAPPTPSSQATTPKKRSLAFRLLPLLTA
                     AALGVGTLGFIAGHGKETTDDAQIESHVASVSPRVSGQVTRVLVQDNQRVHAGDVLVE
                     LDARDFDVRLKSARADLAAATA"
     gene            530..>1786
                     /locus_tag="VLJ38_02955"
     CDS             530..>1786
                     /locus_tag="VLJ38_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38491.1"
                     /translation="MGYIHLMADAAPNSFAVTAAEIRNLRGALSRAAFARTLGVTPQT
                     VYRWELPPERAEARRPRGAELRRLVELMGGGDASPLVDGRANVPARAATASDEDFTSV
                     LPALGRLLEGDGKRGHAELVELLARRRDLSVNARAAACFGIALFEITFRSDARAAMLA
                     LAPALSDAEAGRLNDDTAAKVFSAASLVHAWPDAVLFDIGRVQAYGARVETLAPGTDR
                     EAACTACLAALSAALLVGDQELLDRAYARLEETRWHGLPPLLALHVDEFGMMKVAVTG
                     RPTASRQTQEAVIEQAERLGCPLVLGRSLGRLALAQLDGLGDPAQALALVQRARRVVS
                     APRIGPGWQEPVLVRVEIEALLRLGRSEEALAAAATLDAWSAECGLPPLPAVPALTRL
                     YQVSGRRDALTELAASLERLAVPSLRP"
BASE COUNT          257 a          622 c          614 g          293 t
ORIGIN      
        1 gccgtcgcgg ctgcgagatc ggcgcgcgcc gacttcagtc tcacgtcgaa atcgcgcgca
       61 tcgagctcca cgagcacgtc gcccgcgtgc acgcgctggt tgtcctgcac gagcacccgc
      121 gtcacttgcc cgctcacgcg cggcgacacg ctcgcgacgt gtgactcaat ctgcgcgtcg
      181 tcggtcgtct ccttaccgtg gccagcaatg aacccgagcg tgccgacacc gagcgcggcg
      241 gcagtgagca gcggcaacag gcgaaaggcg aggctgcgct tcttgggcgt cgtcgcttga
      301 ctcgaaggcg tgggaggagc gagcgccgcg gcgctcgagg acagaacatc gtcgatagca
      361 gttgtggtca tggcccgtgc agcccctaag cagcgaccgt gccacgtggc gtcaatgtcg
      421 attaaattag cgattttatg tatttataag tttggcgtgg tgagctagtc cacttagctg
      481 gattttttgg actagttatg gatgtcatcc aattggactc tcacgtggat tgggttacat
      541 ccatttgatg gcggacgctg cgccgaactc cttcgccgtg acggcggccg agatccggaa
      601 tctgcgcggc gcgctcagcc gtgcagcgtt cgctcgcacg ctcggcgtaa cgccccagac
      661 cgtctaccgc tgggagcttc cccccgaacg ggccgaggca cggcgcccgc gcggcgcgga
      721 gctccgccgg ctcgtcgagc tcatgggcgg aggagatgcg tcgccgctcg tcgacggacg
      781 cgcgaacgtt ccggcgcgtg ccgcgaccgc gagcgacgag gatttcacga gtgtgctccc
      841 cgcgctcggt cgtttgctcg agggcgacgg gaaacgcggt cacgccgagc tcgtcgagct
      901 cctcgcgcgc aggcgcgatc tttcggtgaa cgcgcgggcg gcggcgtgct tcggcatcgc
      961 cctgttcgag atcacgttcc gttcggatgc gcgggcggcc atgctcgccc tcgcgcccgc
     1021 gctgtccgat gccgaggccg ggcgcttgaa cgacgacacc gccgccaagg tgttctccgc
     1081 cgcgtctctc gtccacgctt ggcccgacgc cgtgctcttc gacatcggcc gcgtccaagc
     1141 gtacggcgcg cgcgtcgaga ctctcgcgcc cggcaccgac cgcgaagcgg cgtgcacggc
     1201 gtgcctcgcc gcactcagcg cggccctcct cgtcggcgac caggagctgc tcgatcgcgc
     1261 gtacgctcgc ctcgaagaga cgcgctggca cggcctgccg ccgctgctcg cgctgcacgt
     1321 cgacgaattc ggcatgatga aagtcgccgt gacggggcgg ccgacggcgt cgcgccagac
     1381 gcaagaagcc gtgatcgaac aggcggaacg gctcggttgt ccgctcgtcc tcgggcgtag
     1441 cctcggccgg ctcgcgctcg cgcagctcga cggactcggc gatcccgcgc aggcactcgc
     1501 gctcgtgcag cgggcacgtc gcgtcgtgag cgcgccacgc atcgggcccg gctggcaaga
     1561 gccggtgctc gtccgcgtcg aaatcgaagc gctgttgcga ctcgggcgca gcgaggaggc
     1621 gctcgcggcc gccgcgacgc tcgacgcctg gagcgcggag tgcgggctgc cgccactacc
     1681 cgcggtcccg gcgctcacgc gcctttatca agtgagcgga cggcgcgacg cgctcacgga
     1741 gctcgccgcg agcctggagc ggctcgccgt gccttcactc agacct
//
LOCUS       DATIML010000171         4366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3788288, whole genome shotgun sequence.
ACCESSION   DATIML010000171 DATIML010000000
VERSION     DATIML010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4366
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3788288"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VLJ38_02960"
     CDS             complement(<1..381)
                     /locus_tag="VLJ38_02960"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acyltransferase"
                     /protein_id="HSU38492.1"
                     /translation="MNGGDSLRLIVARCSEEIQAAERLQYRVYSEEERLVEPRARLEE
                     SEPEADSAAGRTAHLLVLAGQDPVGTVRLTVPRGDGVFGFELESSFELGGFARPGVVP
                     AEVTRFCVLRRYRGTRAAGILYRGL"
     gene            complement(378..1073)
                     /locus_tag="VLJ38_02965"
     CDS             complement(378..1073)
                     /locus_tag="VLJ38_02965"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSU38493.1"
                     /translation="MSKYDYVRRLKRDAAAFVAVLERDALVGQIIRGEADRSEYVRFL
                     IGTYHYVRWSGVLLARTAEGLRRHGGSPALLALFAAKADEEAPHDRWVLEDLRRCGVN
                     VELVKGEAPPPAVLGYVHSHLALADSGSVAFLGAAYLLEFASAARAHVAAENLRARRL
                     VPNIERALSFLEGHGDADRGHVALLEAHLAELEDVRGRVAIRGAAALLAALFPLFFAG
                     PREAVDAPAGVAA"
     gene            complement(1173..2261)
                     /locus_tag="VLJ38_02970"
     CDS             complement(1173..2261)
                     /locus_tag="VLJ38_02970"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSU38494.1"
                     /translation="MVAWLMLCSGGRRSEAAVLAGLAEALTSSLDVEVVLERAYPFIT
                     TLVPADCGAIGVSWTGAAEDYGWTVVDIPDAFFKSYPEMAPHDFVRRAVARRPNVVLR
                     DEEMMGRRELEANPMYQRAREVGAPIEQVMSVMLHVEQGWQGGLSLYRERRRPFSERE
                     RDALQLATPALANAVRNCQLFRRADDWNQALEAMLSQRGSAAVIVSAAGRELGRSGSA
                     TRLLERWLSPHECRGPWFRDVLRHALGPTQGSCGAIAFRTREDGRVLEVSRVDLPRYG
                     ATSAVLLLLRERPGRVAPPVAWRSLLTRRELDVVSGVLHGWDNQLIAEELACARGTVK
                     KHLQNAFDKLGVDSRASLIARAGALATE"
     gene            complement(2463..2747)
                     /locus_tag="VLJ38_02975"
     CDS             complement(2463..2747)
                     /locus_tag="VLJ38_02975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38495.1"
                     /translation="MKRPALFESTANLPADLASVVAALRRDRVPAEFRGISGKDVHRW
                     LARVGQRGKVPARLKSFRFTPADQRLLEELATSMGISETEVIRRGLRALS"
     gene            3189..>4366
                     /locus_tag="VLJ38_02980"
     CDS             3189..>4366
                     /locus_tag="VLJ38_02980"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSU38496.1"
                     /translation="MSIEGSAELERMTRLYFALSHINQAIVRNRTRLELFARVCKILV
                     EHGGFGLAWTAWRDPETGKLVPVASSGDQRAYLETTSVAGDDCQDGAGPSSLAFRQDR
                     PYICNDLFADPTTLPWRGELDRRGFRSSAALPIHLNGAVAGTLNVYADKPNVFRDQEV
                     ALLVGAAADVSFALDNLAREETHARAEATIEREQRLASGLIECMPGILYLYDEHGQFL
                     RWNANFERVSGYSGEEIRTMHPLDFFSEQEKPLVEQRIGAVFATGEATVEASFVARDG
                     SAVPYFFTGKRIMLDGAPRLVGVGVDIHERRRAEDALKKSEERYRTTLDAMLEACQLL
                     GFDWRYLYLNPAAAHHNRRPNAELIGRRMPEAWPGIEASDVFALLKRCMEERVPVQGE
                     T"
BASE COUNT          771 a         1528 c         1414 g          653 t
ORIGIN      
        1 cagtccccga tacagaatcc ctgccgcacg cgtgccgcgg tagcgcctga gcacgcagaa
       61 gcgcgtcacc tccgccggca ccacgccggg tctcgcaaag ccgccgagct cgaaactcga
      121 ctcgagctcg aagccgaaaa ccccgtcgcc gcgcggaacg gtgaggcgca cggtgccgac
      181 ggggtcctga ccggcgagca ccagaaggtg ggcggtgcgg ccggcggcgg agtccgcttc
      241 gggctcgctt tcctcgaggc gcgcgcgcgg ctcgaccagc cgctcctcct cgctgtacac
      301 gcgatactgc aagcgctccg cggcttggat ctcttccgaa cagcgagcca cgatcagccg
      361 cagcgagtcc cccccgttca tgctgcgact cccgccggcg cgtcgaccgc ctcgcgtggc
      421 ccggcgaaaa atagcggaaa cagcgcggcc agcagcgctg ctgcgcctcg aatcgccacg
      481 cgcccgcgca cgtcctcgag ttcggcgagg tgtgcctcga gcaaggccac gtgcccgcga
      541 tcggcgtcac cgtggccctc caggaacgag agcgcgcgtt cgatattcgg caccaacctg
      601 cgcgcacgca gattctcggc tgcaacgtga gcccgcgccg cggaagcgaa ctcgagcaaa
      661 tacgcggcgc ccaggaacgc caccgagccg ctgtcggcga gcgcgagatg gctgtgcacg
      721 tagccgagga cggccggggg cggagcctcg cccttcacga gctcgacgtt cactccgcag
      781 cgccgcagat cctcgagcac ccagcggtca tgcggcgcct cctcgtcggc tttcgctgca
      841 aagagcgcga ggagcgccgg acttcccccg tgccggcgca gcccttcggc ggtcctcgcc
      901 aagagcaccc ccgaccagcg cacgtaatgg taggtgccga tcaagaagcg cacgtactcg
      961 ctgcggtcgg cttcgccgcg aatgatctgg ccgacgagcg catcgcgctc gagcacggcg
     1021 acgaacgccg ccgcgtctcg cttcaatcgg cgaacgtagt catacttcga catgaatcct
     1081 cgcttccgcg agccaggcaa ggacgcctgg gccgctgatc tctcgtacag agccgggggc
     1141 gcattcgtga cgcgcgcagc gcccggcagc ggttattcgg tggcgagcgc gccggcgcgg
     1201 gcgatgagcg acgcgcggct gtcgacgccg agcttgtcga aggcgttttg aaggtgcttt
     1261 ttcaccgtgc cgcgcgcgca agcgagctct tccgcgatga gctggttgtc ccagccgtgc
     1321 agcacgccgc tcacgacgtc gagctcccgg cgagtgagga gcgaacgcca ggcgaccggc
     1381 ggcgccacgc gcccgggccg ctcgcgaagc aacaagagga cggcgctcgt tgcgccgtag
     1441 cgagggaggt caacgcgcga gacctcgagc acccgaccgt cctcacgggt ccggaacgca
     1501 atcgccccgc acgacccctg cgtcggtccc agcgcatggc gtagaacatc gcggaaccaa
     1561 ggaccacggc actcgtgagg cgagagccaa cgctcgagca gccgcgtcgc gcttccactg
     1621 cgcccgagct cgcggcccgc cgccgatacg atcacggctg cagaaccacg ctgcgagagc
     1681 atggcttcga gcgcctgatt ccagtcgtct gcgcgccgga acagctgaca attacgcact
     1741 gcgttcgcga gcgccggcgt cgccagctgc aatgcgtcgc gctcacgctc gctgaagggc
     1801 cggcgccgtt cgcggtagag cgacagccca ccttgccagc cctgctcgac atgaagcatc
     1861 accgacatca cctgctcgat gggcgcgccc acctcgcgcg ctctctggta catcggattt
     1921 gcctcgagct cgcgtcggcc catcatctct tcgtcgcgca gcaccacgtt cggccggcga
     1981 gccacggcac gccgcacgaa atcgtgcggc gccatctccg gataactctt gaagaaagcg
     2041 tccggaatat cgacgacggt ccagccataa tcctccgcgg cacccgtcca cgacacgcca
     2101 atcgcaccgc agtccgccgg aaccagcgtg gtgatgaacg gataggcgcg ctccagcacg
     2161 acctcgacgt cgagtgagct cgtgagtgct tccgcgagcc ccgcgagaac cgctgcttcc
     2221 gaacgacgac cgccgctaca gagcatcagc catgcaacca cgtttcgacc gaggcagcta
     2281 gaggtctaac cgagcgagcg gaagaacgtt cgcgcgtaga ccacgtttgc tttggtggcc
     2341 agcgtacgcg ccagccggcg taggctgaaa agcattatct ggacgccacg ccgagccgtc
     2401 gaggacttag gcgcaaacgc acgactgaac gacgcactct cgtgattggc gcggagcagc
     2461 ccttacgaga gcgcgcgcag gccgcggcga atcacttcgg tctccgagat gcccatggac
     2521 gtggcgagct cttccagtag ccgctgatcg gcgggcgtga agcggaacga cttgagacgt
     2581 gccggcacct tgccccgctg gcccacgcgg gcgagccacc ggtgcacgtc cttgccgctg
     2641 ataccgcgaa actcggcggg aacgcggtcg cgccgcagcg cggcgacgac gctcgcgaga
     2701 tcggcgggca aatttgccgt cgattcgaac agagcgggtc gcttcacgat caacgccggc
     2761 aagagctcga ggatgcgcgg ctctacctcg cccgcagcgc tcgcttccgt cgcgctcgct
     2821 gcgtgacttg ctcgacgttc acaggaacct ctccaaatcg accgagtact tttgggcgag
     2881 ttcgacgagc tagcaccctg tacatacaaa acaactaagt tttgtatgta catcccgagc
     2941 tgcgcaccgg cgccgcgcgg caatgctttt cagcctgtga cgagcgccgc gcctcgctgg
     3001 ccaccaccac acaaacgaag ctcgcttgcc atgggcgtca tcgcgctcgc cggcgccgac
     3061 gcggcgtccc cgcactgatt ctcgccggta ttgccgcagc cgcccgctgg ccccgcgctg
     3121 cgtcggctgg acccgaatgg tgatagctta tgccgggtga cgctcgcagc gcctagggcc
     3181 ggaagctgat gtcgatcgag ggcagcgcgg agctcgagcg gatgacgcgc ctctacttcg
     3241 cgctcagcca catcaaccag gccatcgtaa gaaatcggac gcgactcgag ctgttcgcga
     3301 gagtctgcaa gatcctcgtc gagcacggcg gattcggcct ggcgtggacc gcgtggcgtg
     3361 atcccgaaac gggaaagctc gtaccggtcg cgagctcggg cgatcagcgc gcgtacctgg
     3421 agaccacctc cgtcgctggc gacgattgcc aggacggcgc ggggccgtcg agcttggcgt
     3481 ttcggcaaga ccgaccgtac atctgcaacg acctgttcgc cgatccgaca acgctcccct
     3541 ggcgcggaga gctcgaccgg cgtggattcc gctcgtcggc ggccctgccc atccacctga
     3601 acggggccgt ggccggaacc ctgaacgtct acgccgacaa gccgaatgtc tttcgcgacc
     3661 aagaggtggc gctgctggtg ggagcagccg ccgacgtctc gttcgcgctc gacaacctgg
     3721 cgcgcgagga aacgcacgcc cgggcggagg cgaccatcga gcgcgagcag cgcttggcga
     3781 gcggtctcat cgagtgcatg cccggcattc tctatctcta cgacgagcac gggcaattcc
     3841 tgcgctggaa cgccaatttc gagcgagtgt cggggtactc cggggaggag attcgaacga
     3901 tgcacccgct cgacttcttc tccgagcagg agaagccgct cgtcgagcag cgaattggcg
     3961 cggtcttcgc gacgggcgaa gcgaccgtcg aggcctcctt cgtggcccgg gacggctcgg
     4021 cggttccgta cttcttcacc ggcaagcgga tcatgctcga cggtgcgcca cgtctggtgg
     4081 gagtgggggt cgacatacac gagcggcgcc gcgcggaaga cgcgctcaag aagagcgaag
     4141 agcgctaccg gacgacgctc gatgcgatgc tcgaagcctg tcagctcctc ggcttcgact
     4201 ggcggtacct ctatctcaat cccgcggcgg cccatcacaa tcgccggccg aacgccgagc
     4261 tcatcgggcg gcgcatgccg gaagcctggc ccggcatcga ggcgagcgac gtgtttgcgc
     4321 tcctcaagcg ctgcatggag gagcgcgttc ccgtccaggg cgagac
//
LOCUS       DATIML010000172         2793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_900431, whole genome shotgun sequence.
ACCESSION   DATIML010000172 DATIML010000000
VERSION     DATIML010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2793
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_900431"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..820)
                     /locus_tag="VLJ38_02985"
     CDS             complement(<1..820)
                     /locus_tag="VLJ38_02985"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSU38497.1"
                     /translation="MTIPVETLQSRTPAPAAGPAIVLERRDDGVAVIRIDVPGESVNT
                     LRGAFAPELEAALDALDADASVRAVVVASGKPDGFVAGADIKELVAAKSVYELSDLSR
                     RGQAAFSRLAASKKPVVAAIHGACLGGGLELALACHARVASSDEKTRLGLPEVQLGLL
                     PALGGTQRLPRLIGTEAALDLILTGKQLDARRAQRAGLVDEVVPPPILFDVAVKLALA
                     RAAGPRASRAGAKRKAFTEALLVKNPLGRAVFFEQAKKRTLVKTHGNYPAPERIL"
     gene            complement(817..2109)
                     /gene="fadI"
                     /locus_tag="VLJ38_02990"
     CDS             complement(817..2109)
                     /gene="fadI"
                     /locus_tag="VLJ38_02990"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HSU38498.1"
                     /translation="MGKSNGDRVAIVAGVRTPFAKQGTAFKQLSALDLGKLAVAELLS
                     RTALKPNEIDQLVYGQVIPSVSVPNIAREIVLGIDLPRRIEAYSVSRACTTSYQSTVN
                     VAESIMAGVIDVGIAGGADSASDIPMVASKHLSDALVTASRARGVGGKLGALRGLSAR
                     DLVPIPPALKEYSTGLTMGESAEKMAKENGISRQAQDEFAHRSHTLAAQAWADGRMAR
                     DVMTSYVPPKYEPFAEDNLVRKDSTLDAYAKLKPVFDRKFGTITAGNSSPLTDGASAL
                     LVMRESKAKSLGYEPLGYVKSYAFAAVDPSEQLLMAPAYAAPLALDRASLKLKNMDLV
                     DLHEAFAAQVLSNTQAFESDTFAREKLGRDKKLGTLDWERVNVLGGSIALGHPFAATG
                     ARQILHTLRELRRRGGEFALCTACAAGGLGAAMVLEAA"
     gene            complement(2228..2725)
                     /locus_tag="VLJ38_02995"
     CDS             complement(2228..2725)
                     /locus_tag="VLJ38_02995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38499.1"
                     /translation="MDQDSRSSIVIIEAGAGWPGWIAEYQRRAPNATVVAQTASEGSA
                     EFRQRVLHRLDEMGKGPNVLSVGVVLCAEGAHDDTRTAREGMCRALVAALDGGDLVLA
                     ATDDAAAFKQELFALAGRLCEGPHASRVNVRVRFSSSESGTMPSVMPTSRLTPVPRRA
                     ANSGD"
BASE COUNT          411 a          952 c          956 g          474 t
ORIGIN      
        1 cgaggatgcg ctccggcgcg gggtagttcc cgtgcgtctt cacgagcgtg cgcttcttcg
       61 cttgttcgaa aaatacggcg cgaccgagcg gatttttgac gagcagcgct tcggtgaacg
      121 ccttgcgctt cgcccccgcg cgcgacgccc tcggacccgc cgcgcgcgcg agtgcaagct
      181 tcacggccac gtcgaacagg atcggcggcg gcacgacctc gtcgaccagg cccgcccgtt
      241 gtgcgcgccg cgcgtcgagc tgcttgcccg tgaggatcag atcgagcgcc gcttccgtgc
      301 cgatcaggcg cggcaagcgc tgcgtgccgc cgagcgccgg caagagaccg agctgcactt
      361 ccggcaagcc gagccgcgtc ttttcgtcgc tgctcgcgac gcgggcgtga caggcgagcg
      421 cgagctcgag cccaccgccg agacacgcac cgtggatggc ggcgacgacc ggcttcttcg
      481 aagccgcgag gcgcgaaaac gccgcctgac cccggcgcga gaggtcgctg agctcgtaga
      541 cgctcttcgc ggcgacgagc tccttgatgt cggcgcccgc cacgaagccg tccggcttgc
      601 cggaggcgac gacgaccgcg cgcacgctcg cgtccgcgtc gagcgcgtcg agcgcggcct
      661 cgagctccgg cgcgaaggcg ccgcgcagcg tgttcacgct ttcgcccggc acgtcgatgc
      721 gaatgacggc gacgccatcg tcacgccgtt cgagcacgat cgcggggccg gcggcgggcg
      781 cgggcgtgcg gctctggagg gtttcgacgg ggatcgtcat gcggcctcga gcaccatggc
      841 ggctccgagc ccgcccgctg cgcacgccgt gcagagcgcg aattcgccgc cgcgtcggcg
      901 gagctcgcgc aaggtgtgca ggatttgacg cgcgcccgtg gcggcaaacg ggtgaccgag
      961 cgcgatcgag ccgcccagca cgttgacgcg ctcccagtcg agcgtgccga gcttcttgtc
     1021 gcgaccgagc ttctcgcgcg cgaaggtgtc gctctcgaac gcttgcgtgt tcgagagcac
     1081 ttgagccgca aacgcttcgt gcaaatcgac gagatccata tttttgagct tgaggctagc
     1141 gcgatcgagc gcgaggggcg cggcgtacgc gggcgccatc aagagctgct cgctcggatc
     1201 gacggcggcg aaggcgtagc tcttgacgta gccgagcggc tcgtagccga ggctcttggc
     1261 tttgctttcg cgcatgacga gcagcgcgct cgcgccgtcg gtgagcggcg agctgttgcc
     1321 ggcggtgatc gtgccgaatt tgcgatcgaa caccggtttt agcttggcgt acgcgtcgag
     1381 cgtcgagtct ttgcgcacga ggttgtcctc ggcgaagggc tcgtacttcg gcggcacgta
     1441 gctggtcatc acgtcgcgcg ccatgcgtcc gtcggcccaa gcttgcgcgg cgagcgtgtg
     1501 gctgcgatgc gcgaactcgt cctgggcttg gcgcgagatg ccgttttcct tcgccatctt
     1561 ctcggcgctt tcacccatcg tgagcccggt cgaatattct ttgagcgcgg gtgggatggg
     1621 cacgagatcg cgcgccgaga ggccgcgcag cgcgccgagc ttaccgccga cacctcgcgc
     1681 gcggctcgca gtgacgagcg cgtccgaaag gtgcttgctc gccaccatcg ggatgtcgct
     1741 cgcgctgtcg gcgccgcccg cgatacctac gtcgatgacg cccgccatga tcgactcggc
     1801 gacgttgacg gtcgattggt agctcgtcgt gcaggcgcgc gacacgctgt acgcttcgat
     1861 cctccgcggc agatcgatcc cgagcacgat ctcgcgcgcg atgttcggca cgctgaccga
     1921 agggatcact tggccgtaga cgagctggtc aatctcgttc ggcttgagcg cggtgcgcga
     1981 gaggagctcg gcgacggcga gcttgcccag gtcgagcgcg ctcagttgct tgaatgccgt
     2041 gccctgtttg gcgaacgggg tacgcacccc cgcgacgatc gcgacccggt ctccgttgct
     2101 cttgcccatc gaggtgcgcg gagcttacac cgcagcacaa ggcgcggtga tggaacgcga
     2161 aacaagcgcc ggtcctccga gcgccctata cggcagacga ttcccctaga ttttaggcag
     2221 agctcgttca gtcgccgcta ttggcggcgc ggcgtggcac gggggtcagt cgcgaggtcg
     2281 gcatgacgga gggcatcgtg ccgctttcgc tggacgagaa gcgcacgcgc acgttgacgc
     2341 gcgaggcatg cggtccctcg cagagtcgcc ccgcaagcgc gaagagctcc tgcttgaacg
     2401 ccgccgcgtc atccgtcgcc gccagcacga gatcgccgcc gtcgagcgcc gccacgagcg
     2461 cgcggcacat gccctcgcgc gcggtccgcg tgtcgtcgtg cgctccctcg gcgcaaagca
     2521 cgacccctac actgagtacg ttcggtccct tccccatttc gtcgagacga tgcagaacgc
     2581 gctgccggaa ctcagcggat ccctcgctcg ccgtttgcgc caccaccgtg gcattcggtg
     2641 cgcgccgctg atactccgcg atccatccag gccagcccgc gccggcttcg atgatcacga
     2701 tggagctgcg gctgtcttgg tccatgtcca tccattccct cagcccacgc acggtgcggg
     2761 ggctcgccta ccgagttgct gtccagaaga gct
//
LOCUS       DATIML010000173         2551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_900559, whole genome shotgun sequence.
ACCESSION   DATIML010000173 DATIML010000000
VERSION     DATIML010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_900559"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1679
                     /locus_tag="VLJ38_03000"
     CDS             <1..1679
                     /locus_tag="VLJ38_03000"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSU38500.1"
                     /translation="RGVTARALDSVIMGPSASAEETFDFVVVGSGFGGSVAAMRLAQK
                     GYRVAVLEAGKRWRHTDFPQTNWNAFKYFWAPKLRCFGIQNITLLKGVMVLHGAGVGG
                     GSLVYANTLMRPRDEVFADPSWGDAVAWRSELEPHFETARRMLGVTTNPALEEGEETL
                     RRVSTRMGAGATFHATEVGVYFGQAGVTVPDPYFSGAGPERTGCVLCGGCMVGCRFRA
                     KNTLDQNYLYFAERFGARVFPETKVVRIVPSPDGYEVETQRTTAWFGAGRQRFRAARV
                     VLAAGVLGTVELLLKNRDEYGTLPNVSAALGQFVRTNGESLLGATSFEAHRDLARGIA
                     IGAAFHPNSLTKIENVRYSPGSGAMRLLGVPLTPDGSAFTRPLKLFWRILRRLPQTLR
                     LWAVMDWARSTVILLVMQTLNQHLRLRLGRSLFGKRRLEGQPTDKPVPSYLPVAQAAA
                     EILAEELHGEAQNVISEVLLRTPATAHILGGCGIAASPASGVIDARHEVFGHPGLYVC
                     DGSVIPGNLGVNPSLTITALAERFAAGFAPAASVSATALAEREIHFGPAP"
     gene            complement(1999..>2551)
                     /locus_tag="VLJ38_03005"
     CDS             complement(1999..>2551)
                     /locus_tag="VLJ38_03005"
                     /inference="COORDINATES: protein motif:HMM:NF019140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSU38501.1"
                     /translation="VDMAECDGQHIGHLEIGAEPRAHVGTHVGEAKKPTRATQTIPPA
                     LRRQVLRRDGGRCQVPGCRHATFVDVHHLRPRSEGGANTIENLVTLCGAHHRASHAGK
                     LSSAGTPSAGLSFLHADGTPYGHAPSPAIAELRSSAYRALVQLGFRESEAKWALARAP
                     LNANVTLGDVIRQALRELAGDRH"
BASE COUNT          378 a          873 c          899 g          401 t
ORIGIN      
        1 ggcgcggcgt cacggcgcgg gcgctagact cggtgatcat gggcccgagc gcgtccgccg
       61 aggaaacgtt cgacttcgtc gtggtcggca gcggcttcgg cggcagcgtc gcggccatgc
      121 ggctcgcgca gaagggttac cgcgtcgccg tgctcgaagc cgggaaacgc tggcgccaca
      181 cggatttccc gcagacgaac tggaacgcgt tcaaatactt ttgggcgccc aagctccgct
      241 gcttcggcat ccaaaacatc accttgctca agggcgtgat ggtgctccac ggcgcgggcg
      301 tcggcggcgg gagcctcgtg tacgcgaaca cgctgatgcg cccgcgcgac gaagtcttcg
      361 ccgatccgtc gtggggcgac gccgtcgcct ggcggagcga gctcgagccg cacttcgaga
      421 ccgcgcgccg catgctcggc gtcacgacca accccgcgct cgaggagggc gaagagacgc
      481 tccggcgcgt gagcacacgc atgggcgcgg gcgcgacctt tcacgccacc gaggtcggcg
      541 tgtacttcgg tcaagcgggc gtcaccgtac ccgacccgta tttttcgggc gcgggccccg
      601 aacgcaccgg ctgcgtgctc tgcggcggtt gcatggtcgg ctgccgtttc cgcgccaaaa
      661 atacgctcga ccaaaactac ctctacttcg ccgaacgctt cggtgcgcgc gtcttccccg
      721 aaaccaaagt cgtgcgcatc gttccgagcc cggacggcta cgaggtcgaa acccagcgga
      781 cgacggcgtg gttcggcgcg gggcgtcagc gctttcgcgc cgcgcgcgtc gtgctcgcgg
      841 cgggcgtgct cggcaccgtc gagctcctgc tcaaaaaccg cgacgagtac ggcacgctgc
      901 cgaacgtctc cgcggcgctc ggtcaattcg tacgcacgaa cggcgagagc ctgctcggcg
      961 cgacgagctt cgaagcgcac cgtgatcttg cgcgcggcat cgccatcggc gccgcctttc
     1021 acccgaactc cctcacgaag atcgaaaacg tccgctattc gcccggctcg ggcgcgatgc
     1081 gtttgctcgg ggttcccctc acgccggacg gcagcgcgtt cacgcgaccg ctcaagctgt
     1141 tctggcgcat cctgcggcgc ctgccgcaga ccttgcggct ctgggcggtc atggattggg
     1201 cccgcagcac cgtcatcctg ctcgtgatgc aaacgctcaa tcagcacctg cggctcaggc
     1261 tcggacgctc actgttcggc aagcggcggc tcgaagggca gccgacggac aagccggtgc
     1321 cgagctacct gcccgttgcg caagctgccg ccgagatatt ggccgaggag ctgcacggcg
     1381 aagcgcagaa cgtcatctcc gaggtgctct tgcgcacgcc ggccacagcg cacattttgg
     1441 gcgggtgcgg catcgcggcc tcacccgcga gcggggtcat cgacgcgcgg cacgaagtgt
     1501 tcggtcaccc gggactctac gtgtgcgatg gcagcgtcat tccgggcaac ctcggcgtga
     1561 acccgagcct cacgatcacg gcgctcgccg agcgcttcgc cgcggggttc gcaccggccg
     1621 cgagcgtgag cgcgacggcg ctcgcggagc gcgaaattca cttcggcccc gcgccgtgag
     1681 tggatggggc ccgtccgcac gccaggcgca gctgccgctc ggagtggcgc gttcagttga
     1741 cgttttcatg ttcgggcaat gagctgcccc cgcgtggtcc ggcgccgcac gtgctgcgtg
     1801 ctcggccttc agcctgcgcg cgcaggcgcc cgccaagcgc ccgcttcgcg gtcgcggggg
     1861 cgcgacgaag tcgggcgaca tcggccgggt gcgacggggc gcggcatcgc gcgagacgca
     1921 cggcgcggtg agcagacacg ctgagccaca ccggagcgcg gccgggcggg cggtgctacc
     1981 gcggtccgag ccgcagggtc agtgccggtc tccggcgagc tcgcgcagcg cttggcggat
     2041 tacgtctccg agcgtgacgt tggcattgag gggagcacgc gcgagcgccc atttcgcctc
     2101 cgactcgcgg aagccgagct gaacgagggc gcgataggcg ctcgagcgta gttcggcgat
     2161 agcgggcgag ggcgcatgtc cgtaaggagt gccgtcagcg tgcaggaagc tgagacccgc
     2221 ggacggtgtc cctgcgctcg aaagctttcc ggcgtgactc gcgcgatgat gcgcgccgca
     2281 cagcgtgacg agattctcga ttgtgttcgc gccgccttcg gagcgaggcc ggagatggtg
     2341 cacatccacg aaagtcgcgt gccggcagcc gggcacctgg cagcgtccac cgtcgcggcg
     2401 cagcacctgg cgccggagag caggcgggat ggtttgcgtc gcgcgcgtgg gtttcttcgc
     2461 ttcgcccacg tgggttccca cgtgggcgcg cggttcggcg cctatttcga gatgcccgat
     2521 gtgctgccca tcgcactcgg ccatgtcgac c
//
LOCUS       DATIML010000174         3271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5522270, whole genome shotgun sequence.
ACCESSION   DATIML010000174 DATIML010000000
VERSION     DATIML010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5522270"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1174
                     /locus_tag="VLJ38_03010"
     CDS             <1..1174
                     /locus_tag="VLJ38_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU38502.1"
                     /translation="LMTAFGGVEPAVRAMREGAEDFLTKPLNTDELMLVLERTLEHSR
                     LRRETSSLRSRLEERYSFDNIVGSSPEMQRLFKSVAQIAPSRATVLVTGESGTGKELV
                     AAAIHHHSPRAAGPFVKLHCAALAESLLESELFGHERGAFTGADRRREGRFEQANGGT
                     LFLDEIGEISPSTQVKLLRVLQEREFERVGGTQTLHVDVRVIVATNRDLKEMVAAGKF
                     REDLYYRLNVINLTLPSLRHRLSDVPALATHFLKRYAAENDKTVTGFTDEALAQIASY
                     PWPGNVRELENVIERAVVLADSEVIELRHLPAELAVTSRRSGPPPIPGATLEELERFA
                     ILKTMESVGGSTSKAAEVLGISVRKIQYKLQEYSNSQKTQTPSVAPRDEHDTSTQN"
     gene            complement(1348..2577)
                     /locus_tag="VLJ38_03015"
     CDS             complement(1348..2577)
                     /locus_tag="VLJ38_03015"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU38503.1"
                     /translation="MKLWQTLPLALKALARNTTRSLLTTLGIVIGVASVISMVAVGEG
                     ARARVESVFATMGTNMLIVLSGSTSSGGVMGGFGSMPTLTWDDLAAIRSQARAVRSAA
                     PAISARVTILSDEANWTTGIVGTSPEYLSIRAWRIARGSAFGSDEIDAAAKAIVLGQT
                     ASDKLFGSGVDPIGRTVRLRSVPFVVIGLLERKGQSPMGNDYDDVALVPISTFQSKIQ
                     GGLHNYIPGVIVVSATTAADTSRAQREMAAILRDRHHVASAAEDDFSIRNLTELANAQ
                     QQGTKALTGLLAAIAVVSLFVGGIGIMNIMLVSVTERTREIGVRMAVGAKPWHVLAQF
                     LVEAVTLSMAGGLLGLALGAAAAKQVATRFAWPFALRLDMAIVAFSFSAFVGVAFGLY
                     PARKASRLDPIDALRYE"
     gene            complement(2574..>3271)
                     /locus_tag="VLJ38_03020"
     CDS             complement(2574..>3271)
                     /locus_tag="VLJ38_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38504.1"
                     /translation="MKTYVLGDDVLHALDGVNLTIEQAEFVAIMGASGSGKSTLMNIL
                     GCLDRPSSGRYLLAGQDVAHLSRGELAEIRNQLLGFVFQNFNLLPRTSAVENVELPLI
                     YAGTPRAERRRRALEALARMGLAARVHHHPSQLSGGQQQRVAIARAIVNRPKLILADE
                     PTGNLDSKTSVGVMAVLQELARGGPTVVYVTHDAEVARYASRVLVMRDGQLVSDDRQT
                     GKQAAEAALPEVA"
BASE COUNT          583 a         1096 c         1075 g          517 t
ORIGIN      
        1 gctcatgacg gcgttcgggg gcgtcgagcc cgccgtgcgc gccatgcgcg agggcgcgga
       61 agacttcctc acgaagccgc tcaacaccga cgagctcatg ctcgtgctcg agcgcacgct
      121 cgaacactcg cggctgcgcc gcgagacctc ctcgctccgc agccgactcg aggagcggta
      181 ctcgttcgac aacatcgtcg gctcgtcccc ggaaatgcag cgcctgttca agtcggtcgc
      241 tcagattgct ccgagccgcg ccaccgtgct cgtgacgggg gaatccggca ccggcaagga
      301 gcttgtcgcc gccgcgattc atcatcattc gccacgcgca gccggcccgt tcgtgaagct
      361 ccattgtgcg gctctcgcgg agagcctgct cgaaagcgag ctcttcggcc acgaacgtgg
      421 cgcgtttacg ggcgctgatc ggcggcgcga aggccgcttc gagcaggcga acggcggcac
      481 gctgtttctg gacgagatcg gcgaaatctc gccgagcacg caggtcaaac tgctgcgcgt
      541 cctgcaggag cgggaattcg agcgcgtggg cggcactcag acgttacacg tggatgtccg
      601 cgtgatcgtg gccaccaatc gtgacctgaa ggagatggtc gccgccggaa agtttcgcga
      661 agacctctac tatcgactga acgtgatcaa cctgacgctg ccttcgctcc ggcaccgcct
      721 gtccgacgtt cccgcgctcg cgacgcactt tctcaaacgc tacgccgccg aaaatgacaa
      781 gaccgtcacc ggctttacgg acgaagcgct ggcgcaaatc gctagctatc cgtggccggg
      841 caacgtgcgc gagctcgaga acgtcatcga acgcgccgtc gtcctcgccg acagcgaagt
      901 gatcgagctg cggcatttac ccgcggagct cgccgtgacc tcgcgccgta gcggccctcc
      961 gccgattccg ggcgcgacct tggaggagct cgagcgcttc gcgatcctga agaccatgga
     1021 atccgtgggc ggctcgacca gcaaagcggc agaagtgctc ggcatcagcg tgcgcaagat
     1081 ccagtacaaa ctgcaggagt acagcaactc ccagaagacc cagactccct ccgtcgcccc
     1141 acgcgacgag cacgatacgt cgacgcaaaa ttgacgtact cagaaccaac cgccaagagc
     1201 gccaagattt tcttaggatt tgaatccgcc ggtctggacg cctgcgcgct ccgctccgaa
     1261 cccaatccct ctgctgcttg gcgacttggc ggttcatccc gttcgggccc atcgccgtga
     1321 cgggcccatc gccgtgagcc aggcgcttca ctcgtaacgg agcgcgtcga tcgggtcgag
     1381 ccgtgaggcc ttgcgcgcgg ggtagagccc gaaagcgacg cccacgaacg cgctgaagga
     1441 gaaggcgacg atcgccatgt cgagccgcag cgcgaacggc cacgcgaagc gcgtcgccac
     1501 ttgtttggcc gccgcggcgc cgagcgcgag gccgagcagc ccgccggcca tcgagagcgt
     1561 caccgcctcg acgaggaatt gcgcgaggac gtgccacggc ttggcaccga cggccatgcg
     1621 cacgccgatt tcgcgcgtcc gctccgtcac gctcacgagc atgatgttca tgatgccgat
     1681 gccgccgacg aagagcgaga caacggcaat cgcggcgagc aagccggtga gcgccttggt
     1741 gccttgttgc tgcgcgttcg cgagctcggt caaattgcgg atcgagaagt cgtcctcggc
     1801 cgccgaggcg acgtgatgtc ggtcgcgcag gatggccgcc atctcgcgct gcgcgcgcga
     1861 cgtgtccgcg gccgtcgtcg cgctcacgac gatcacaccg ggaatgtagt tgtgaaggcc
     1921 gccctggatc ttgctttgga aggtcgaaat cggaacgagg gccacgtcgt cgtagtcgtt
     1981 gcccatggga gattgcccct tgcgctcgag cagcccaatc acgacgaaag gcacggagcg
     2041 caggcgcacg gtgcggccga tcggatcgac acccgagccg aacagcttgt cggacgcggt
     2101 ctggccgagc acgatcgctt tggctgccgc gtcgatctcg tcggagccga acgccgagcc
     2161 gcgagcgatg cgccaggctc gaatcgacag atattcgggg ctggtgccca cgatgcccgt
     2221 cgtccagttg gcttcgtccg aaaggatcgt gacgcgcgcg ctgatggccg gagccgccga
     2281 gcgcacggcc cgtgcttggc tgcgaatcgc cgcgaggtcg tcccacgtga gcgtgggcat
     2341 ggacccgaag ccgcccatga cgccgcccga cgaggtcgag cccgaaagca cgatcagcat
     2401 gttggtgccc atggtcgcga acacgctctc gacgcgagct cgggctcctt cgcccacggc
     2461 gaccatcgaa atcacggacg cgacgccgat cacgatcccg agcgtcgtga gcaaggaacg
     2521 ggtcgtgttg cgggcgaggg ccttgagcgc gagcggcagt gtttgccaga gcttcatgca
     2581 acctccggca gcgcggcctc ggcggcttgc ttgcccgtct gacggtcgtc cgacacgagc
     2641 tggccgtcgc gcatcacgag cacgcgcgag gcgtagcgcg caacctccgc gtcatgcgtg
     2701 acgtagacga cggtcggccc cccgcgcgcg agctcctgca acaccgccat gacgccgacg
     2761 ctcgtcttgg agtcgaggtt accggtcggc tcgtccgcga gaatgagctt cggccgattg
     2821 acgatcgcgc gcgcaatggc gacgcgctgt tgctgccctc cggagagctg cgacggatgg
     2881 tgatggacgc gggcggcgag ccccatgcgc gcgagggctt cgagcgcacg ccgccggcgt
     2941 tcggcacgcg gcgtgcccgc gtaaatcagg ggcagctcga cgttctcgac cgccgacgtg
     3001 cgcgggagca ggttgaagtt ctggaacacg aagccgagca gctggttcct gatctcggcg
     3061 agctcgcccc gcgaaaggtg cgcgacgtcc tgtccggcca aaaggtaacg gcccgagctc
     3121 ggccgatcca aacaaccgag aatgttcatc agcgtggact tgcccgagcc ggacgcgccc
     3181 atgatcgcga cgaactctgc ctgttcgatg gtcaggttca cgccgtccag ggcatgcagc
     3241 acgtcgtcgc cgaggacgta cgtcttcatc a
//
LOCUS       DATIML010000175         4972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3788696, whole genome shotgun sequence.
ACCESSION   DATIML010000175 DATIML010000000
VERSION     DATIML010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4972
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3788696"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..659)
                     /locus_tag="VLJ38_03025"
     CDS             complement(111..659)
                     /locus_tag="VLJ38_03025"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HSU38505.1"
                     /translation="MSKQRYVALLRGINVGGNNLIKMAELKQSFVAMGFTDVETYIAS
                     GNVIFTAKPGERGKLVKSIEVGLERAFGYASRVVVVSGDELALVVAEAPAGFGKQPKK
                     YRYDVLFVKPPLVAREALPLVPVKEGVDVAAAGKHALYFRRLISKATQSRLSRIVGLS
                     IYRDITIRNFNTTTKLLEKVNG"
     gene            complement(687..1916)
                     /locus_tag="VLJ38_03030"
     CDS             complement(687..1916)
                     /locus_tag="VLJ38_03030"
                     /inference="COORDINATES: protein motif:HMM:NF042530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HSU38506.1"
                     /translation="MATPDARSAAIGRTFRAAHGRLMAALVRRFGVERLALAESALQE
                     ASLRALERYPDEPQSSRLEGWLLRVAHNVVVDELRAERRHVELAQEDAGTSEPSRVEL
                     DDELRLMFLCCHPELPRAAQIALTLRIAFGFETPQIARAFLADERTIAQRIVRAKQRL
                     REQHTPFELPERSELPERMPPILDVLYQLFNEGYATTDSESGIDDALCGDSLRLVRLL
                     TDDARSTTPAAEALRALFCFHVARAPARHAEDGGLLLLHEQDRERWDRVLFAEAFTYL
                     GRSARGSELTHFHLEAAIAACHAQAPSYTATDWAEILRLYELLRRAAPSPVVDVNRAL
                     AVAMCRGATAGLDELDAIPERELIARYPYALATYAELHASLGHLDQARHFFERALEQQ
                     TSRAERALLERKRAALE"
     gene            complement(1903..2268)
                     /locus_tag="VLJ38_03035"
     CDS             complement(1903..2268)
                     /locus_tag="VLJ38_03035"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSU38507.1"
                     /translation="MAQYMLLLGGADLDKRSQDPAFGPQIFQHFKRWLDTLQAGGHYV
                     SSHKLRDQTGARLSVRGGEVVEGPFMETKEAVGGVFLIEAASLEQAISLARSSPTLAL
                     QNGFVEVRVIEEVKLPGNP"
     gene            2475..4589
                     /locus_tag="VLJ38_03040"
     CDS             2475..4589
                     /locus_tag="VLJ38_03040"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU38508.1"
                     /translation="MGQSEAPIERELAVARGREAEYRTRLTRQRDLARRLRSHAAQLR
                     EAIKEPQGRGSLDALLASVARLTSQALDIPRTSIWLFDSSGKYLVCRFQMPVPASGLS
                     EAHLDVASCPGYIRAITQTEVGAIAVEDALTDPRTSELEDYLVQHRIGALLDVPLIGP
                     GELRGVLCHEYQGSSRKWQEEEIDFAADVGALVSLTLEVERRVWTEQTLRGTEAKYKH
                     LVETLPVVVYSFDARTGELDYLSPRVKDLGGRSAEEYLVSGGVERWVDAVFPEERDGV
                     RRRLSWQIDDGLEPELVYRIRLPDGTRRYVRDTCAVVRDAHGRPVAIQGTLADITTQR
                     EAELERAEVERRFNSLLDGVDVLAVVLDAAGRVELINETFLRLTGYAREEVIGADGFG
                     LLLPERERERVRDDFLKGMREGKVVRHFETTIRRRDGASRKVLWTNTPAHSADGAVIG
                     SSSLGVDITDRLEAEALALQGEKLESLGRLAAGIAHDFNNLLTVIGGAADRLTLPQTD
                     TAEAARDIQRAVRQSAELTRALLAYARREPIRPVSLALDGLIDETWPVLAKLVPPGLT
                     LTHHLDARDTHVTADPTQLRQVIMNLVGNAVDATVGHGTTIWLSTSVLALDLDQARAH
                     GFATEASFVVLSVSDDGPGVPPAIRERIFEPFFTTKPQGEGTGLGLALCASIARGAGG
                     FITAESTPGGGASFRVFLPVTG"
BASE COUNT          782 a         1694 c         1665 g          831 t
ORIGIN      
        1 tagcgggggc aactctcgag ttcgcccaat gctggctcca ttctgagcgc gggtcgctcg
       61 acgcggagat ccgatgaatg tgagtggggg aacgcccccg cgtagcgccg tcagccgttc
      121 accttttcga gcagcttcgt cgtcgtgttg aagttgcgga tcgtgatgtc tcgataaatc
      181 gagagcccga cgatacgcga gagccgactc tgcgtggcct tgctgatgag ccgccggaag
      241 tagagcgcgt gcttgcccgc cgccgctacg tcgacgccct ctttcacggg cacgagcggg
      301 agcgcctcgc gcgcgacgag cggcggtttc acgaacagca cgtcgtagcg gtactttttc
      361 ggctgcttgc cgaatcccgc gggcgcctct gcgacgacga gcgcgagctc gtcgccggaa
      421 acgaccacca cacgcgacgc gtagccgaat gcgcgctcga ggccgacctc gatcgatttc
      481 acgagcttgc cgcgctcgcc cggcttggcc gtgaagatga cgttgccgct cgcgatgtac
      541 gtctcgacgt ccgtgaagcc catggccaca aagctctgct tgagctcggc cattttgatc
      601 aggttgttgc cgccgacgtt gatgccgcgg aggagcgcga cgtaacgctg cttgctcatg
      661 gcgagggtcc tcgttcgtag tcgagcctac tcgagggcgg cgcgcttgcg ttcgagaaga
      721 gctcgttcgg cgcgtgaggt ctgttgctcg agcgcgcgct cgaagaaatg cctggcttgg
      781 tcgaggtgcc cgagcgaggc gtggagctcg gcgtacgtgg cgagcgcgta gggatagcgc
      841 gcgatgagct cgcgctcggg gatggcgtcg agctcgtcga ggccggccgt ggccccgcgg
      901 cacatcgcga ccgcgagcgc tcgattcacg tcgacgacgg gcgagggcgc ggcgcgccgc
      961 aagagctcgt acagccgcaa gatttccgcc caatcggtcg ccgtgtaact cggcgcctgc
     1021 gcgtgacacg ccgcgatcgc cgcctcgagg tgaaagtgcg tgagctcgct gccgcgcgcc
     1081 gagcggccga ggtacgtgaa cgcttcggcg aagaggacgc ggtcccaccg ttcgcggtcc
     1141 tgctcgtgga gcaagagcaa gccgccgtct tcggcgtgcc gggcgggggc gcgagccacg
     1201 tggaagcaga agagcgcgcg gagcgcctcg gccgcgggcg tcgtggagcg cgcgtcgtcg
     1261 gtgagcaggc ggacgaggcg cagcgagtcg ccacacagcg cgtcgtcgat gccggactcg
     1321 ctgtccgtcg tggcgtagcc ttcgttgaag agctggtaga gcacgtcgag gatcggtggc
     1381 atgcgctcgg gcagctcgga gcgttccggc agctcgaagg gcgtgtgttg ctcgcgcaag
     1441 cgctgcttgg cacgcacgat ccgttgcgcg atcgtgcgct cgtccgccag gaacgcgcgc
     1501 gcaatttgcg gcgtctcgaa gccgaacgcg atacgcagcg tgagcgcgat ttgggccgcg
     1561 cgtggcagct ccgggtgaca gcacaggaac atcaggcgga gctcgtcgtc gagctcgacg
     1621 cgagacggtt cgctcgtccc cgcgtcctct tgtgcgagct cgacgtgacg gcgctctgcg
     1681 cggagctcgt ccaccacgac gttgtgagcg acccgcaaga gccacccttc gagacgagag
     1741 ctttgtggct cgtcggggta gcgctcgagc gcgcgcagtg aagcctcctg cagcgcgctc
     1801 tcggcgagcg cgagccgctc gacaccgaaa cggcgcacga gcgccgccat cagacggccg
     1861 tgcgcggcgc gaaacgtgcg tccgatcgcc gcgctgcgcg cgtcaggggt tgccaggcag
     1921 cttgacctct tcgatgacgc gcacctcgac gaagccgttc tggagcgcta gcgtcggcga
     1981 gctccgcgcg agcgaaatcg cttgctcgag cgacgcggct tcgatgagga agactccgcc
     2041 gaccgcttcc ttcgtttcca tgaacggccc ctcgacgact tcaccgcccc gaacgctgag
     2101 acgagcgccc gtctggtcgc gcagcttgtg cgacgacacg tagtgtccgc cggcctgcag
     2161 cgtatcgagc caacgcttga agtgttggaa gatctgcggt ccgaacgcgg gatcctggct
     2221 gcgcttgtcg agatcggcgc cgccgagtag cagcatgtat tgggccatga tttcctttcc
     2281 gccggtctag aacggccggc aggcgccgag atcgacgagc tcgtgtcgat tttcgggagc
     2341 gccataccgt acggatttgg gccggctgcc tcgtgacaag gtcgtatttt tagcgtcaac
     2401 ggtcgcgcac gccacggcgg ccgcgaccgt ggtccgcgcc gtctcggatc tgctaacctc
     2461 gggcaacgac agcgatgggg cagtccgagg cgccgattga acgagagctc gccgtcgccc
     2521 gcgggcgcga agccgaatac cgcacacgcc tgacccgtca gcgcgatctc gcgcgccgcc
     2581 tgcgttccca tgcggcccag ttgcgggaag ccatcaagga gccgcagggc agaggcagcc
     2641 tcgacgcgct gctcgccagc gtggcgcggc tcacgagcca agcgctggac atcccgcgca
     2701 cgagcatctg gctcttcgat tcgtccggca agtacctggt ttgtcgcttt caaatgcccg
     2761 taccggcgtc cgggctgagc gaggcgcacc tcgacgtcgc aagttgcccc ggctacatcc
     2821 gtgcgatcac gcaaaccgag gtcggcgcca tcgccgtcga ggacgcgctc accgatccgc
     2881 gcacctccga gctcgaggat tacctcgtgc agcatcggat cggcgcgctg ctcgacgtgc
     2941 ccctgattgg tcccggggag ctccgcggcg tgctctgcca cgaatatcag ggctcctcac
     3001 gaaagtggca agaagaggaa atcgacttcg ccgcggacgt gggcgcgctc gtttcgctca
     3061 cgctcgaggt ggagcgccgc gtgtggacgg agcagacgct ccgcggcacc gaggcgaaat
     3121 acaagcattt ggtcgagacc ctgccggtcg tcgtttactc gttcgacgcg cgaaccggcg
     3181 agctcgacta cctgagcccg cgggtcaagg atctcggcgg ccgcagcgcc gaggagtacc
     3241 tcgtctcggg cggcgtcgag cgttgggtgg acgccgtctt tcccgaagag cgcgacggcg
     3301 tgcggcgccg cctctcgtgg caaatcgacg acggcctcga gcccgagctc gtctatcgca
     3361 ttcgcttgcc cgacggcacg cgccgttacg tgcgcgacac ctgcgccgtg gtccgcgacg
     3421 cccatggccg gcccgtcgcc attcaaggca ccctcgccga catcacgacc cagcgcgagg
     3481 ccgagctcga gcgcgccgag gtcgagcgcc gcttcaattc gctgctcgac ggcgtcgacg
     3541 tgctcgccgt cgtgctggac gcggctggac gtgtcgaatt gatcaacgag accttcctcc
     3601 ggctcaccgg ctacgcgcgc gaagaggtca tcggcgccga cggcttcggg ctgctcttgc
     3661 cggagcgcga gcgcgagcgt gtccgcgacg attttctgaa gggcatgcgc gagggcaaag
     3721 tcgtgcgtca cttcgagacc acgatccgcc gccgcgacgg cgcgagccgc aaagtactgt
     3781 ggacgaacac gccggcgcac tccgccgacg gcgccgtcat cggcagctcg agcctcggcg
     3841 tcgacatcac cgatcgactc gaggccgaag cgctcgcgct ccagggcgaa aagctcgaaa
     3901 gcctgggccg cctcgccgcg ggcatcgctc acgacttcaa taacctgctc acggtcatcg
     3961 gcggcgcggc ggaccggctc acgctaccgc agaccgatac ggcggaagcg gcgcgcgaca
     4021 ttcagagggc cgtgcgacag tctgccgagc tcacgcgcgc gctcctcgcg tacgctcggc
     4081 gcgagccgat tcgtcccgtg tcgctcgcgc tcgacggcct gattgacgag acgtggcccg
     4141 tgctcgcgaa gctcgtgcca ccgggcctca ccctcacgca ccacctcgac gcgcgcgaca
     4201 cccacgtcac cgccgacccg acacagctcc gccaagtcat catgaacctc gtcggcaacg
     4261 ccgtagacgc gacggtcggg cacggcacga ccatttggct ctccacgagc gtgctcgcgc
     4321 tcgatctgga ccaagcccgc gcccacggct tcgcgacgga agcgagcttc gtcgtcctga
     4381 gcgtcagcga cgacggcccc ggcgttcccc ccgcaatccg cgagcgcatc ttcgaaccgt
     4441 tcttcacgac caagccccag ggcgaaggca ccggcctcgg cctcgccctc tgcgcctcca
     4501 tcgcacgcgg cgccggcggc ttcattactg ccgagagcac accgggcggc ggcgcgtctt
     4561 ttcgggtgtt tttgcccgtt accggctaaa aggcagcgcg agctcgcccg cccgccgcaa
     4621 tcttcacccg cgctgcttac actttgctgt cacgccgcca caattttcgt aggttgagcg
     4681 cgtgagccac ggcgaatcgc gcgagctgcg ccagcaaaaa cgactgaatc ggttcgaccg
     4741 gcgcctcctg cggcggttcg tggccacggc gcggccgtat tggttctcga acgaaaagtg
     4801 gttcgctcgc ggcctcgtgg ccctgctcgt gctgctgctg atcggcgaca ccgagttcaa
     4861 cgtctttttc aacaggcaat ccggcgagtt cacgtcggct ctcgccgccc aggactctgc
     4921 gcgtttttgg cactcgattc gtctgttcgt cgcctgcttg ctgttcgcag tg
//
LOCUS       DATIML010000176         3247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2923376, whole genome shotgun sequence.
ACCESSION   DATIML010000176 DATIML010000000
VERSION     DATIML010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2923376"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1455)
                     /locus_tag="VLJ38_03045"
     CDS             complement(139..1455)
                     /locus_tag="VLJ38_03045"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38509.1"
                     /translation="MADALRSPFAPAPWQPGTVVKERYRLEVLLRRGGMGSVWKAHDL
                     VTDAAVALKGLEPEIARDRVMVRRFLREAQAAQLLESPNVVRIHDYGIDDDQAFIAME
                     LLEGEVLSERITRVGRLAPEEVLRFVSDIVRAMEPAHSAGIIHRDLKPDNVFICRGEP
                     EVAKVLDFGVAKVKKGALWTGTGTGTQTGLMLGTPYYMSPEQTQARPIDQRTDLWSIA
                     VVTFEALLGQRPFVAETFGDLVIAICTAKAPIPSRVGAVPPGFDEWFVRATQRDRARR
                     FQTAREMIEELTSVLAPSPGKRAVSGRMPTLGASSALATAQSAPPRPSARGLTNPERN
                     DLQLTTGQRSAVARSASSDAERGGNTGLFLLLGVAALIVVGVAAFAFGGGARALRRAE
                     VASAAAAVMPSASFTAPPRPGPSARPEQAPELPASALAREPKFVPR"
     gene            complement(1514..>3247)
                     /locus_tag="VLJ38_03050"
     CDS             complement(1514..>3247)
                     /locus_tag="VLJ38_03050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38510.1"
                     /translation="RVAALGHALADQELVRAQDARLVAERAELTRARESLDADYADAF
                     RASGLTPLPPLEMRAWVQRRARALELVEQARVVESELAKAEAARALVEKAVVVALGAD
                     ALEGTLALAVERASALQAEAARLENERRETERALDALTARLAHETRELEAAERTLAAW
                     RAAWTLAVEPLGAGAEILPVAALELLDELSALAALVERREGLERRVNGIRRDEAELAS
                     EVSELARDHGVPFERAAPDAAAEEIVRRFRRGEAARDERARLASENVERSALLEAERA
                     SLAEAERELWALARAVGAADPAELPAFEAKSRRARELEAQLALLETTLVDDSGGRSVA
                     ALVTEAAGEDAPRLAARIDALTRELEELEEERNRAHDRAASLQAGQRQQADALGAEAA
                     QEEQTLGAALAERVGRYATLRVATALLERAIERYRIENQAPILKRAGELFPRLTDEGY
                     STLRVGREERGIVAVRADGSELAPHELSTGTRYQLYLALRLASVERVIAGSEPLPLVL
                     DDVTVHVDDARKRRTFAVLADIATRVQILFFTHHALDAELACAAAGARARVHELSRKS
                     PNVEAWETLAR"
BASE COUNT          442 a         1176 c         1163 g          466 t
ORIGIN      
        1 tgcgcacgat gatgggcggc agctcgcttt cggggacgcg cagcgctccg gcaacgcggc
       61 gccggaccgc ggcgtcgtct tcggcgtcgt cgagcgcaag ctcgagcgtg agctcgccgg
      121 gcaaggctcg cgacggcatc agcgcgggac gaacttgggc tcgcgcgcca gcgccgaagc
      181 cggcagctcg ggtgcctgct cgggtctcgc cgatggcccg ggtcgaggtg gagccgtgaa
      241 cgaggccgag ggcatgacgg cggcagccgc ggacgcgacc tctgcccggc gtaaggcccg
      301 cgcgccgccg ccgaacgcga acgctgccac gcccacgacg atcagcgcgg caacaccaag
      361 caataggaag agcccggtgt tgccgccgcg ctcggcgtcg gacgaggccg agcgcgcaac
      421 ggccgagcgc tgccccgtcg tgagctgcaa gtcgttgcgt tcggggttcg tgagcccgcg
      481 cgcactcggg cgcggcggcg cgctttgcgc cgtagcgagc gcgctgctcg cgccgagcgt
      541 gggcatccgg ccgctgacgg cgcgcttgcc ggggctgggg gcgagcacgc tcgtgagctc
      601 ctcgatcatc tcgcgagcgg tctgaaaacg gcgggcgcgg tcccgttgcg tcgcccgcac
      661 gaaccactcg tcgaaacccg gcggcacggc gccgacgcgt gacgggatcg gggcctttgc
      721 cgtgcaaatc gcaatcacga gatcgccgaa cgtctcggcg acgaacggac gttgcccgag
      781 cagcgcctcg aacgtgacca ccgcgatcga ccaaagatcc gtgcgttgat cgatgggccg
      841 cgcctgagtc tgttcggggc tcatgtagta aggcgtgccg agcatcaggc ccgtctgcgt
      901 gcccgtgccc gtgccggtcc agagcgcgcc ctttttcacc ttcgcgacgc cgaaatcgag
      961 caccttggcg acttccggct caccacgaca gatgaacacg ttgtcgggct tgagatcgcg
     1021 gtgaatgatg ccggcggagt gtgccggctc catcgcgcgc acgatatccg agacgaagcg
     1081 caggacttct tcgggcgcga gacggccgac cctcgtgatg cgctcactca gaacctcgcc
     1141 ctcgagcagc tccatggcga tgaaggcctg atcgtcatcg atgccatagt cgtgaatgcg
     1201 cacgacgttc gggctttcta gcagctgcgc ggcctgcgct tcgcgcagga aacgccgcac
     1261 catcacgcgg tcgcgcgcga tctccggctc gagccccttg agcgccaccg ctgcgtcggt
     1321 gacgagatcg tgagctttcc acaccgagcc catgccgccg cggcggagca gcacttcgag
     1381 ccggtaacgc tccttgacga cggtccccgg ttgccagggc gccggcgcga aaggtgatcg
     1441 aagcgcgtca gccacgatcc acgcagcgta ccgagccggg cgggtcgccg caagcccgtg
     1501 ggcctacacc gccctacctc gcaagggtct cccaagcctc cacgttcggg gacttccggg
     1561 agagctcgtg cacgcgcgca cgggcgcctg cggcggcgca cgcgagctcg gcgtcgagcg
     1621 cgtggtgcgt gaagaacaaa atctggacgc gtgtggcgat gtccgcgagg accgcgaacg
     1681 tgcggcgctt gcgtgcgtcg tccacgtgca cggtcacgtc gtcgagcacg agcggcagcg
     1741 gttcactgcc ggcgatcacg cgctcgacgc tcgcgagccg gagcgccagg taaagctggt
     1801 aacgggttcc cgtgctgagc tcgtgcggcg cgagctcgga gccgtcggcg cgaacggcca
     1861 cgataccgcg ctcctcacgg cccacgcgca acgtcgagta gccctcgtcg gtgagccgcg
     1921 gaaagagctc gccggcgcgc ttgaggatcg gcgcctggtt ttcgatgcga tagcgctcga
     1981 tcgcgcgctc gagcagcgcc gtggccacgc gcagcgtcgc gtagcggccg acgcgttcgg
     2041 cgagcgccgc gccgagcgtc tgctcctcct gcgccgcctc ggcgccgagc gcgtccgctt
     2101 gctggcgctg tccggcttgg agcgacgccg cgcgatcgtg cgctcggttc cgctcctcct
     2161 cgagctcctc gagctcgcgc gtgagggcgt cgatgcgcgc ggcgagccgc ggcgcgtcct
     2221 cgccggccgc ctcggtgacg agcgcggcga ccgagcgacc gccggaatca tcgaccagcg
     2281 tcgtctcgag cagcgcgagc tgcgcttcga gctcgcgcgc gcgccggctc ttggcctcga
     2341 aggccggcag ctcggccgga tccgcggcgc ctacggcgcg tgcgagcgcc cagagctctc
     2401 gctcggcctc ggcgagcgac gcccgttcgg cctcgagcag cgccgagcgc tcgacgtttt
     2461 cgctcgcgag ccgagctcgc tcgtcgcgcg ccgcttcgcc ccgccggaac cgccgcacga
     2521 tctcctcggc ggccgcgtcg ggcgccgcgc gctcgaacgg cacgccgtgg tcgcgcgcga
     2581 gctcgctcac ctcgctcgcg agctccgctt cgtcgcgccg gatgccgttc acgcgccgct
     2641 cgagtccttc acgccgctcg acgagcgcgg cgagtgccga gagctcgtcc aagagctcga
     2701 gcgcggcgac cggcaaaatc tcggcgccgg ctccgagcgg ctcgacggca agcgtccagg
     2761 cggcgcgcca cgcagcgagg gttcgctcgg cggcttcgag ctcgcgcgtt tcgtgagcga
     2821 ggcgcgccgt gagcgcgtcg agcgcgcgct ccgtttcgcg gcgctcgttc tcgagccgcg
     2881 ccgcttcggc ttgcagcgcc gacgctcgtt cgacggcgag cgccagcgtg ccctcgagcg
     2941 cgtccgcacc gagcgcgacg acgacggctt tttcgacgag cgcgcgcgcc gcctcggcct
     3001 ttgcgagctc ggactcgacg acacgggctt gctcgacgag ctcgagcgcc cgcgcgcgcc
     3061 gttgcaccca ggcgcgcatc tcgagcggag gcagcggcgt gaggcccgac gcccgaaatg
     3121 cgtcggcgta gtccgcgtcc aggctctcac gcgcccgcgt gagctcggct cgttcggcga
     3181 cgagacgtgc gtcttgggcg cgcacgagct cttggtcggc gagcgcgtgg ccgagcgccg
     3241 cgactcg
//
LOCUS       DATIML010000177         5649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3789253, whole genome shotgun sequence.
ACCESSION   DATIML010000177 DATIML010000000
VERSION     DATIML010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5649
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3789253"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..4287)
                     /locus_tag="VLJ38_03055"
     CDS             complement(<1..4287)
                     /locus_tag="VLJ38_03055"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38511.1"
                     /translation="MIETDLLRAELERSFELEELLHLSRNVLGFEPERVGGTTARASF
                     AGALAAHCAEEDAVEALCDAVLALRPDANPELLRIRTTGLAADDELPAGSSFGPFTLA
                     LKLGEGRSAVVYAATRQGKDYRLRILRHEATRDRRGLQRFLTVNRLIADIEHEYLPQR
                     LEAGTIDGRHYVAHELLAGETLASRVTRTGPMHGNDARPLLRAVLEGLDALHQRRIAH
                     GDLRLDNVVSLRTHEGALRVVLLDAGADRLRARPRLGTGRSDLYATMASPWTAAPEQI
                     RGLDADPRSDVYSFGAMAYALLTGRPPFGDGSALDSAFGHLTRAPATASSLAPKGFVS
                     PEMDELLARLLEKDPENRPPNAAAVLASLEQTARVLSIAPPMSSAEVDSLLERLRSEP
                     TNESVAMQLESAAEGAPERVATAFVAAAHELAGDALATKKDLLFRAARIHVARTPSLP
                     AAEALYKEIVELDPDDRVAFGALEDVRRRLGKFDELVETLLERIERTGTRGERSRLFA
                     EIGRIYARDIKDRDQALVAFTQALCEDPRQAPIATEIERLAGSRGDAWNDVLTAVTEA
                     AQAEGVPPEEKSALFLRAARWYADKAQRLDLALSGYQAVVDLDPANETALDGLTRIYR
                     KAQQWQELGTVLTRRADAAASPAEARDFRAEAAELLELYLNDPASARAMVEAVLAEDP
                     GHVAASNQLVRLCERAGDFAGLVKILERRAQAQRGEERLKTLYRVAELYEQKLSDDAE
                     AEQRYQAVLDLDAKNLDALRGLDRLYSKAGRFKDLLQNLDLQIEAAATPRQKIALWER
                     IASIYEEEFLDHDKAASALEQLLALDPSHDAALGSLTRHYRALERWDDVAALYERHER
                     SVSDAGRKLALLLQRARLLADQLNAPDRAIDAYEQVLTLSPEHPQALEALARLRESAG
                     DADAALAAIDALAAKATTPEAKGEQLVRAAKLLEARGDRDGAIERYKAALDANPADSG
                     AATALREAYVARGDVNAAIQLIERAIEHTEGDRAKAKLAGQIAVLYKHKLKDERRAEE
                     AGKRAVQLDPTNLDGLLVLGDLALDAGRYLEASKHYEVIAGRADSLPRPDAVRMLIRY
                     VDALSLSGSTEQALAPMDTLLRLAPDDRDALERVAQVTFEHGSPARAAELYGTLIDRF
                     DPILDDDSRYLAYLRRGESLRRVGELAAAVPLLETAAEVAPNKTEPLAALAQTYVALE
                     SWDEAIRTKTRHLDIAVGDDRVQLLLDIGEIASSKINDRTQAAKSFVAALEERPDDRR
                     ILAKLMQLYSEEKDWNKLVEVVLRLADFVEDPKQRVKYLNTAANITAKQIGDTGRALE
                     FYTQVLELDPSLEKAEKEALELYLDRKEFAGAERILKTKLERATAADDQAAMLAAFSD
                     LGEVYEQSGATDKSIDALEAAQTLDPENRERAEKLSALYATDPERYLDKAV"
     gene            4463..4756
                     /locus_tag="VLJ38_03060"
     CDS             4463..4756
                     /locus_tag="VLJ38_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HSU38512.1"
                     /translation="MKSIELFAQRVLPLFVTAGAAVAVPLLVFSPSGLTRLTALRQER
                     ARAEEEVTRLSREIERLRAEVQRVKEDPAYVERAARDELGLLRQTEVVFQFKR"
     gene            4911..>5649
                     /locus_tag="VLJ38_03065"
     CDS             4911..>5649
                     /locus_tag="VLJ38_03065"
                     /inference="COORDINATES: protein motif:HMM:NF017009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38513.1"
                     /translation="MSIEVVQLLLRAGASELEVEDALGRAVAAGQTLAKVLGDADPEL
                     ERRLERELERVEVPSIELVRPETEQLALLPAGLAERLGVVPVRKDTRSGRIDVAALDP
                     LDAHVVTELEFHLGAKVRVLRADPAAISAALGGTSPPRSPSGPPILLVRKVLPEDEPV
                     LQLARPKAPRASVPTGPLLPLELAQAAFEQTRTPDEVVTALIEGLAPARTIVLAVRST
                     SFVGRAGSAAFEREAVRRVEILNSSPSV"
BASE COUNT          798 a         1834 c         2036 g          981 t
ORIGIN      
        1 gactgccttg tcgaggtagc gctcggggtc ggtggcgtag agcgcgctca gcttttcggc
       61 gcgctcgcgg ttttccgggt cgagcgtctg ggccgcttcg agcgcgtcga tgctcttgtc
      121 ggtcgcgccg ctctgctcgt acacctcgcc gaggtccgag aacgccgcga gcatggccgc
      181 ttgatcgtcg gcggccgtgg cgcgttcgag cttcgtcttc aagatgcgct cggcgccggc
      241 gaattctttg cgatcgaggt agagctcgag cgcctctttt tccgctttct cgaggctcgg
      301 atcgagctcc aagacctgcg tgtagaattc gagcgcgcgg cccgtgtcgc cgatttgctt
      361 ggcggtgatg ttggcggcgg tgttcaggta tttgacgcgc tgcttaggat cttcgacgaa
      421 gtcggcgagg cggagcacga cttcgaccag cttgttccag tccttttcct cgctgtagag
      481 ctgcatcaac ttggcgagga tgcgacggtc gtcgggacgc tcttcgagcg cggcgacgaa
      541 gctcttggcc gcttgggtgc ggtcgttgat cttgctcgag gcgatctccc cgatgtcgag
      601 caggagctgc acacggtcgt caccgacggc gatgtcgagg tggcgcgtct tcgtgcgaat
      661 ggcctcgtcc cagctctcga gcgcgacgta ggtctgcgcc agcgctgcga gcggttccgt
      721 cttgttcggc gcgacttctg ccgcggtctc gaggagcggg acggccgcgg cgagctcgcc
      781 gacgcggcgc agtgattccc cgcgtcggag gtaggcgaga tagcggctat cgtcgtcgag
      841 gatggggtcg aagcggtcaa tcaaggtgcc gtagagctcg gcggcgcgcg cgggggagcc
      901 gtgctcgaag gtgacttgag cgacacgttc gagcgcgtcg cggtcgtcgg gcgcgaggcg
      961 taggagcgtg tccatcggcg cgagcgcttg ctcggtcgac cccgacagcg agagcgcgtc
     1021 gacgtagcgg atgagcatgc gcacggcatc ggggcgcggc agcgagtcgg cgcggccggc
     1081 gatgacctcg tagtgcttgg aggcttcgag gtagcggccg gcgtcgagcg cgaggtcgcc
     1141 gaggacgagc aggccgtcga ggttcgtggg atccagctga acggcgcgtt tgcccgcttc
     1201 ctcggcgcgg cgctcgtctt tcagcttgtg cttgtagagg acggcgatct gcccggcgag
     1261 cttcgccttg gcgcggtcgc cctcggtgtg ctcgatggcg cgttcgatca gctggatcgc
     1321 ggcgttcacg tcgccgcgcg cgacgtacgc ttcgcgcagg gcggtggcgg caccgctgtc
     1381 ggcgggattg gcgtcgagcg cagccttgta acgctcgatg gcgccgtcgc gatcgccgcg
     1441 cgcctcgagc agtttggccg cgcgcacgag ctgttcgcct ttggcctcgg gggtcgtcgc
     1501 cttggcagcg agcgcgtcga tggcagcgag cgccgcgtcc gcgtcacccg ccgactcgcg
     1561 cagccgcgcg agcgcttcga gcgcttgggg gtgttcgggc gagagcgtga gcacctgctc
     1621 gtacgcgtcg atcgcgcggt cgggcgcgtt cagctggtcg gcgagcaagc gcgcacgttg
     1681 caagaggagc gcgagcttcc tgccggcatc gctcacgctg cgctcgtgac gttcgtacag
     1741 ggcggccacg tcgtcccagc gctcgagcgc ccgatagtgg cgcgtgaggg acccgagcgc
     1801 tgcgtcgtgg gaaggatcga gcgcgagcag ctgctcgagg gcggacgcgg ccttgtcgtg
     1861 gtcgaggaat tcctcttcgt aaatcgaggc gatgcgctcc caaagcgcga tcttctggcg
     1921 cggcgtcgcg gcagcttcaa tctgcagatc gagattttgg agcagatcct tgaagcggcc
     1981 cgccttgctg tagagccggt cgagaccgcg cagggcgtct aggttcttgg cgtccaggtc
     2041 gagtacggct tggtagcgct gctcggcctc ggcgtcgtcc gatagctttt gctcgtagag
     2101 ctcggcgacg cggtacagcg tcttcaggcg ttcttcgccg cgctgcgcct gcgcgcgcct
     2161 ttcgagaatc ttcacgaggc ccgcgaagtc gcccgcgcgt tcgcacaggc gcacgagctg
     2221 attgctggcg gcgacgtgcc ccggatcctc ggccaggacc gcctcgacca tcgcgcgcgc
     2281 ggaggcaggg tcgttcaagt agagctcgag cagctccgcc gcctcggcac ggaaatcccg
     2341 ggcttcggcg ggactcgccg ccgcgtcggc gcggcgggtg agcacggtgc cgagctcctg
     2401 ccactgttgc gccttacggt agatgcgcgt gaggccgtcg agcgcggttt cgttcgccgg
     2461 atcgaggtcg acgaccgcct ggtagccgga cagggcgaga tcgaggcgtt gcgctttgtc
     2521 cgcgtaccag cgcgccgcgc gcagaaagag cgcgctcttt tcctcgggcg gcacgccttc
     2581 ggcctgggcg gcttcggtga cggcggtgag cacgtcgttc cacgcatcgc cgcggctacc
     2641 cgcgaggcgc tcgatttccg tggcgatcgg cgcttggcgt gggtcttcgc agagcgcttg
     2701 cgtgaaggcg acgagcgcct gatcgcgatc cttgatgtcg cgcgcgtaga tacgtccgat
     2761 ctccgcgaac agacgcgagc gctcgccgcg cgtgccggtg cgctcgatcc gttcgagcag
     2821 cgtctcgacg agctcgtcga acttaccgag cctgcgccgc acgtcctcga gcgcgccgaa
     2881 ggcgacgcga tcatcgggat cgagctcgac gatctctttg tagagcgcct cggctgcggg
     2941 caagctcggc gtacgcgcca cgtggatacg cgcggcccga aacaagagat ccttcttggt
     3001 cgcgagcgca tcaccggcga gctcgtgcgc tgccgcaacg aacgccgtcg ccacacgctc
     3061 aggcgcgccc tcggctgccg actcgagctg catcgcgacg ctctcgttcg tcggctcgct
     3121 ccgcagccgc tcgagcaagc tgtcgacttc cgcggacgac atgggcggcg caatgctcag
     3181 gacgcgcgcg gtctgctcca ggctcgcgag cacggcggcc gcgttcggcg gccgattttc
     3241 ggggtctttt tcgagcagcc gcgccaaaag ctcgtccatt tcgggcgaaa cgaagccctt
     3301 gggcgcgagc gagctcgccg tcgcgggggc gcgcgtgaga tgcccgaacg ccgagtcgag
     3361 cgccgaaccg tcgccgaacg gcgggcggcc cgtgagcagc gcgtacgcca tcgccccgaa
     3421 cgagtacacg tcgctgcgcg gatcggcgtc gagcccacgg atctgctcgg gcgcggcggt
     3481 ccacggtgag gccatggtcg cgtacagatc gctacgaccg gtcccgaggc gcggacgagc
     3541 gcgcaagcga tcggcacccg cgtcgagcaa gacgacgcgg agcgcgcctt cgtgcgtcct
     3601 gagcgagacg acgttgtcga gccgcaaatc gccgtgcgct atgcgacgct gatggagcgc
     3661 gtcgagtcct tcgagcacgg cgcgcaagag cgggcgcgcg tcgttgccgt gcatggggcc
     3721 cgtgcgcgtc acgcgcgagg cgagcgtctc accggcgagc agctcgtgcg ccacgtagtg
     3781 gcggccgtcg atcgtgcctg cttcgagccg ttgcggcagg tattcgtgct cgatgtcggc
     3841 gatcaggcga ttgacggtga gaaaacgctg gagcccgcgg cggtcgcgcg tcgcctcgtg
     3901 ccgcaggatg cgcagccgat agtccttgcc ttggcgcgtc gccgcgtaaa cgaccgccga
     3961 tcgaccctcg cccagcttga gcgccagcgt gaacgggccg aagctcgaac ctgcggggag
     4021 ctcgtcgtct gctgcgagcc ctgtggtacg gatgcgcaag agctccgggt tcgcgtcggg
     4081 gcgcagcgcg aggaccgcgt cgcagagcgc ctcgaccgcg tcttcctcgg cgcagtgggc
     4141 ggcgagcgca ccggcgaagg aagctcgtgc agtcgtgccc ccgacgcgct ccggctcgaa
     4201 gcccaataca ttgcgactga ggtgaagcag ttcttcgagc tcgaacgaac gctcgagctc
     4261 cgcgcgcaaa aggtcggtct cgatcatgag gagaggtcca tggagaatgc cgcccgccgc
     4321 tcgcccgaaa agttggccgt cggacgaagg ctcgaaacga tagctcgcct tcagggctgc
     4381 ctgccgcaaa tttctactgc tgcgaccgac ttggcccttg ggatcgccgt gtgggagagg
     4441 tgggagtgga agaccgcgac aaatgaagtc gatcgagctt ttcgcccagc gcgtcctgcc
     4501 cctgttcgtc acggccggtg ccgcggtggc agtgccgctc ctcgtctttt cgccctcggg
     4561 cctgactcgc ctcaccgctt tgcgacagga acgcgcgcgc gccgaagagg aggtgacgcg
     4621 gctctctcgc gagatcgagc gtctccgcgc cgaagttcag cgcgtcaaag aggatccggc
     4681 ctacgtcgaa cgcgccgctc gagacgagct tggcctcctg cgtcaaacgg aagtcgtgtt
     4741 tcaattcaag cgctgaagcg catttccgcg acgcgaacgc agctggttct gctcgactcg
     4801 cgtccggcaa tctcgcgcgc cgaacacgaa caccccaaaa ttcccgcggg gacggtggag
     4861 acgcgtttag tacgttcgct gcgcggcgcg cgtcggtata gggtctaatc gtgtcgatcg
     4921 aggtcgttca gctgttgctg cgcgcgggtg cctcggagct cgaggtggag gacgcactag
     4981 ggcgagcggt ggccgccgga cagacgttgg cgaaggtatt gggcgatgcc gacccggagc
     5041 tcgagcggcg cctcgagcgg gagctcgaac gggtggaagt gccctcgatc gagctggtgc
     5101 gtcccgaaac cgagcaactc gcactcctgc cggccgggct cgccgaacgc ttgggcgtcg
     5161 tacccgtgcg caaagacacg cgctcgggtc gcatcgacgt cgccgcgctc gatccgctcg
     5221 acgcgcacgt ggtcacggag ctcgagtttc acctcggcgc gaaggttcgc gtgctgcgcg
     5281 ccgacccggc agcgatcagc gcggcgctcg gtggcaccag tccgccacgc tcgccgagtg
     5341 gcccaccgat cctcttggtg cgcaaggtcc tgcccgagga cgaaccggtg ctccagctcg
     5401 cgcggccgaa agcgccgcgt gcctcggtgc ccacgggtcc gctcctgccg ctcgagctcg
     5461 cccaggccgc gttcgagcaa acgcgcacac ccgacgaggt cgtgacggcg ctcatcgagg
     5521 ggctcgcgcc ggcgcgcacc atcgtgctcg cggtgcgttc gacgtcgttc gtcgggcgcg
     5581 cggggagcgc ggcgttcgag cgtgaggcgg tgcggcgtgt cgagattctg aattcgtcgc
     5641 cgagcgtcg
//
LOCUS       DATIML010000178         7130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5522962, whole genome shotgun sequence.
ACCESSION   DATIML010000178 DATIML010000000
VERSION     DATIML010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7130
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5522962"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VLJ38_03070"
     CDS             <1..445
                     /locus_tag="VLJ38_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38514.1"
                     /translation="AETSSSVTLPPSVGLVIPGTKPVPAPPARFHDRFVPRFGVEPRF
                     TLKRALELRLRAGYAYERSPVPEQQVGTRFFDVDRHVVSAGAGVAWSSPVQPFSALRL
                     DLSLADAVGVPRTASTTAGPNADHASGHVLLLGTTLTLVFGGAED"
     gene            451..2964
                     /locus_tag="VLJ38_03075"
     CDS             451..2964
                     /locus_tag="VLJ38_03075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38515.1"
                     /translation="MPLLPAAEPQSNADRRGKWSAAAAFGFVALSIAAPIKKSGIWEP
                     FELRSIELARRIAIGLFGATGLELPGVNNALPTRGEVDRGELPFESVALGLRVFGLHA
                     WAGRLPLVLAALAGIAASYLAVQRLGSRSAATLSVLVLGTMPLSFLHARTMLGDGMTM
                     AALAVALAGLTLALFDRGSLRLRLGFLALGLLGLAAGLLSRGLLLGVLVPLLGPTLAW
                     AVLRLAGALARDRTTTLLGVCLSALCVVTAALGARLYLHALDAPERYFLWLGFGITEP
                     AVPPTFDSVIGALGHALFPWSALVPVACMRLTAFTGVGPPPADGEKGLRFACLATAAL
                     GLGAWGGIAPDAGVLPFGPVAALAIAVGLALAELDRGAAASRAAGMTGVALLVLLLSD
                     FLNEPEKAFVPFGLEGAHFPDSFRSAGHGLFLAGTGLAALTFFAAFMEPDAEAAEPFA
                     RRDYAVWIETVRELWNGNLLFGACVVEAALLGFVGFDLLGERFPPLARFAAASEATRA
                     LGRVAWLALPLLAVLPLATLALRDAVRWLLRARRRFRFGAWLPSRGALAALGSVAFGS
                     ALSLVYYPALAAQLSPEESFDAFVRLARPGEALGVVGAGSATAPYAAGRSVVGLEDTN
                     KATSWLFATQERRWLMLRSDELGGMNSRYRAHLQRGNLPILDARSSEILLASNQLRAG
                     EKNQNPLEEIVRDVAPHPSHPLDANLGDQLDVLGWDVTDLDRHPVSRVVPGRRYEFVI
                     YFHVVNRIIGAWETFVHIDGFQRRFNGDHPTLGGRYPFALWNVGDYLVDRHEIRLEPN
                     FTHGSYRVFFGLYLGARRLAVRRGPHDDDRIDAGELLVE"
     gene            3129..3527
                     /locus_tag="VLJ38_03080"
     CDS             3129..3527
                     /locus_tag="VLJ38_03080"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02266 family protein"
                     /protein_id="HSU38516.1"
                     /translation="MSGEKSERPLPSERPGADRRSADRIDVVWSVDCETEDTFLYANI
                     TNISEVGIFVRTNEPLEVGTRVTLKFAPPGSHDPLVLTGQVQWVNPIKMLASNPNPGM
                     GIRFIDLNRDSRERLVGVVRTIAYVRSSTN"
     gene            3630..4601
                     /locus_tag="VLJ38_03085"
     CDS             3630..4601
                     /locus_tag="VLJ38_03085"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HSU38517.1"
                     /translation="MRPRFSADYRTLLWVLITMLLVGVQYARPELVKWLWWLSCYFAL
                     SCGVIAHNHNHCPTFASKGMNQLFGYVISTWYGFPVFAWIPTHNLNHHKFVNRAGDAT
                     ITWRFTNKRVAWVAATYFFVSSYYQGFPIRAFLNKAREQNPSLYRRVQTQRLVFVVAH
                     ATLLVLAIALHGVKLGLYTYVVAVAVPAFFALWTIMLFNYEQHVHTDPWSAHNHSRSW
                     DRFWVNFLLFNNGYHAAHHENPGTHWSRLKAIHAELAPKIDARLIVKDNLWLYFAKQY
                     LFAPFFPSLGSQQIGRAPFDPPNGELEVVTSADVDLGEAGTNTAMVS"
     gene            complement(4615..5730)
                     /locus_tag="VLJ38_03090"
     CDS             complement(4615..5730)
                     /locus_tag="VLJ38_03090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38518.1"
                     /translation="MDCERFDRSVLDLLYDELDELTAAAARRHLEHCVRCRGILAGLR
                     ATREVGALPLVDPPDGLELRILDAERQLHGRLPLDKRLGRAVSVLAGYAMRPQLAMAA
                     TLLLVIGAGLVFFRGRPSDHDTVSVTERGVAENDPEPVTVLPKGAAQDPGNDAHGALA
                     AAPEARRAEPATTLAPQRPAPEAAPSPAVAPAAKDEVATDGVYLSALAAYHAGRYKEA
                     RQQFESVVARGGAQAPEAALYGAQATKSGEGCGAAAPLFDQVSLHYPGTHAGYEATWE
                     AAACYQTLGDTEKARRSYQALLDETGYAARARSALMELDRVEGTAELATRKAPAKAAE
                     KAPPQAQSPSGSASNAGSSSAKPAAPARPGVGTLPAE"
     gene            complement(5817..6434)
                     /locus_tag="VLJ38_03095"
     CDS             complement(5817..6434)
                     /locus_tag="VLJ38_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU38519.1"
                     /translation="MAAVPGDASDETLMVRYQRGDRGAFTVLVRRHHRGLYNFVLRQL
                     RLPTLAEEVTQDVFLRVVQNASEYKQEARFVTWTYAIARNLCVDHLRKLAHRRHPSLE
                     QPLGPADDARSLGDVVASKRVDGDAERATAALQIRATLIQAVETLPEDQREVYLLREL
                     GNLSFKEIAEVTGVAENTAKSRMRYALDRLRTSLADYEEYARALR"
     gene            6869..>7130
                     /locus_tag="VLJ38_03100"
     CDS             6869..>7130
                     /locus_tag="VLJ38_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38520.1"
                     /translation="MKRSIVALSLAAVAALSLAGTAQGQGVKATATAKTTTPKASGTA
                     SAAPTTSAPAVTTATPTPSAVAPPVTTAAPPTTTVQPTTTLAP"
BASE COUNT          998 a         2480 c         2372 g         1280 t
ORIGIN      
        1 cgccgaaact tcgagcagcg tgaccctgcc gccgtcggtg gggctcgtga tcccggggac
       61 gaagcccgtg cccgcgccgc cggcgcgatt ccacgaccgc ttcgtgccgc gcttcggcgt
      121 cgagccgcgc ttcacgctga agcgagcgct cgagctacgg ctgcgggcgg ggtatgccta
      181 cgaacgctct cccgtccccg aacagcaagt cggcacgcgg tttttcgacg tcgaccggca
      241 cgtcgtctcg gccggagccg gcgtggcttg gtcctcgccc gttcagccat tttccgcctt
      301 acgtttggat ctcagcttgg ctgacgccgt cggtgtccct cgcaccgctt ctacgacggc
      361 cgggccgaac gccgatcacg cgtccgggca cgtgctgctg ctcggcacga cactgacgct
      421 ggtcttcggc ggcgcagagg actagcttcc ttgccgctgt tgcccgccgc cgagcctcag
      481 tcgaacgcgg accgtcgcgg aaaatggagc gccgccgcgg ccttcggttt cgttgcgctc
      541 agcatcgccg ctcccatcaa gaaaagcggc atctgggagc cgttcgagct ccgttcgatc
      601 gagctggcac gccggatcgc gatcggcctg ttcggtgcga cggggctcga gctccccggc
      661 gtgaacaacg ccctgccgac gcgcggcgaa gtcgatcgcg gtgagctgcc cttcgaaagc
      721 gtagcgctcg ggctgcgcgt tttcggctta cacgcgtggg ccggccgact gccgctcgtg
      781 ctcgccgcgc tcgcgggcat cgcggcgagc tacctcgcgg tgcagaggct cggcagccgc
      841 agcgcggcga cgctcagcgt gctcgtgctc ggcacgatgc cgctctcttt cttgcatgcc
      901 cgcaccatgc tcggcgacgg catgaccatg gcagcgctcg ccgtcgcgct cgccggcctc
      961 acgctcgcgc tcttcgatcg cggcagtttg cgcctgcgtc tcgggtttct cgcgctcggc
     1021 ctgctcgggc tcgcggccgg gttgctctca cgcggactcc tgctcggcgt gctcgttccg
     1081 ctcctcggcc cgacgctcgc gtgggccgtg ctgcgcctcg ccggcgcgct cgctcgcgat
     1141 cgcacgacga cgctgctcgg agtatgtctc tccgcgctct gcgtcgtcac ggccgcgctc
     1201 ggcgcgcgcc tctacctgca cgcgctcgac gcgccggagc gctactttct ctggctcggg
     1261 ttcggcatca cggaacccgc cgtgccgccg accttcgata gcgtcatcgg tgccctcggc
     1321 cacgcgctct tcccctggag cgcgctcgtg cccgtcgcct gcatgcgcct cacggcgttc
     1381 acgggcgtcg gtccgccacc ggccgacggc gagaagggac tcagatttgc ctgcctcgcg
     1441 acggccgcgc tcggtctcgg cgcttggggc ggcattgcgc ccgacgcagg cgttctgccg
     1501 ttcggtcccg tcgctgcgct ggccattgcc gtcgggcttg cacttgccga actcgatcgt
     1561 ggcgccgctg cttcgcgggc cgcaggcatg accggcgtcg cgctgctcgt gctcttgctc
     1621 tccgattttc tgaacgagcc cgagaaggcg ttcgtgccgt tcgggctaga aggcgcccat
     1681 ttcccggaca gtttcaggtc ggcggggcac gggctatttc tcgctggaac cggcctggcg
     1741 gcgctcacgt tcttcgcggc attcatggag ccggacgcgg aagcagcgga gccgttcgcg
     1801 cggcgcgact acgccgtgtg gatcgaaacc gtgcgcgagc tctggaacgg caacttgctc
     1861 ttcggcgcgt gcgtcgtcga ggccgcgctg ctcggcttcg tcggtttcga cctgctcggt
     1921 gagcggtttc caccgctcgc gcgcttcgct gctgcgagtg aagcgacgcg cgcgctcggt
     1981 cgtgtcgctt ggctcgcctt gcctctactc gccgtgttgc cgctcgcgac gctcgccttg
     2041 cgcgacgccg tgcgctggct gcttcgcgcg cgccgccgct ttcgttttgg cgcctggctg
     2101 ccgtcgcgcg gagcgctcgc ggcgctcggc agcgtcgcgt tcggctccgc tttgagtctc
     2161 gtttactacc cggcgctcgc ggcgcagctt tcgcccgagg agtccttcga cgcgttcgtg
     2221 cgcttggcgc gtccgggcga agcactcggg gtcgtcggcg cggggagcgc cacggctccg
     2281 tacgctgcgg gccgcagcgt cgtcgggctc gaagacacga acaaggcgac gagctggctc
     2341 ttcgcgacgc aggagcgccg ttggctcatg ctgcgctccg acgagctcgg cggcatgaac
     2401 tctcgctatc gggcgcattt gcagcgcggc aatttgccga ttctcgacgc gcgctcgagc
     2461 gagatcctgc tcgcgtccaa ccagctccgc gcgggcgaaa agaatcagaa cccactcgaa
     2521 gagatcgtgc gcgacgtagc gccccatccc tcgcacccgc tcgacgcgaa cctcggcgat
     2581 cagctcgacg ttctcggctg ggacgtgacc gacctcgacc gtcacccggt gagccgcgtc
     2641 gtgcccggcc gccgttacga gttcgtgatc tactttcacg tggtgaaccg catcatcggc
     2701 gcgtgggaga ccttcgttca catcgacgga ttccaacggc gcttcaacgg tgatcacccg
     2761 acgctcggag gccgttatcc gttcgcgctc tggaacgtcg gcgactacct cgtcgaccgg
     2821 cacgagatcc gactcgagcc gaacttcacg cacggctcat accgcgtctt cttcgggttg
     2881 tacctcggcg ctcgacggct agcggttcgt cgcggaccgc atgacgacga ccgcatcgac
     2941 gcgggcgagc tgctcgtcga gtgaggcgcg gccggagggc cgtgctcgtg cgggcacggc
     3001 gagggtagta acctcgcggc ccatggacga ggcgtcgcgc ccacttcccg agggccggtt
     3061 cgcgcctttc gtcgaggcgg cgccttgtga gcgtgacacg cgcgctgatc gaggctaagg
     3121 ccgatgacgt gagcggcgag aagtcggagc gacccctgcc ttcggagcga cccggagcgg
     3181 atcggcgaag cgccgatcgc atcgacgtcg tgtggtcggt ggactgcgag accgaggaca
     3241 ctttcctgta cgcgaacatc acgaacatct cggaggtggg gatcttcgta cgcaccaacg
     3301 agccgctcga agtcggcacg cgtgtcacgt tgaagttcgc gccgcccggc agtcacgacc
     3361 cgctcgtctt gacggggcag gttcagtggg tgaacccgat caagatgctg gcgagcaacc
     3421 cgaatcccgg catgggcatc cgctttatcg atctcaaccg cgacagccgc gaacggctag
     3481 tcggcgtcgt tcgcacgatc gcctacgtgc gcagctcgac gaactgaacg ggcgcgagcg
     3541 tcactgcgca aggtcttgcg cagtacgccc gccttgccaa cgggccgaat gtttgtcaga
     3601 agagggccgg ccgtccgcgc ggccgtgtga tgcgaccccg tttttctgcc gactaccgca
     3661 cgctgctctg ggttctgatc acgatgctcc tggtcggcgt gcagtacgcc cgtcccgagc
     3721 tcgtgaagtg gctttggtgg ctgagctgct atttcgccct cagctgcggc gtcatcgcgc
     3781 acaaccacaa ccattgcccg acgtttgcct cgaagggcat gaaccagctc ttcggctacg
     3841 tgatttcgac ctggtacggc ttcccggtct tcgcctggat cccgacccac aacttgaacc
     3901 atcacaagtt cgtgaaccgc gccggcgacg ccaccatcac gtggcgcttc acgaacaagc
     3961 gcgtcgcgtg ggtcgctgcg acgtacttct tcgtctcgag ctactaccag ggtttcccga
     4021 tccgcgcgtt cttgaacaag gcgcgcgagc agaacccgtc cttatatcgc agggtgcaga
     4081 cgcagcgtct ggtcttcgtc gtggcgcacg cgacgctgct cgtgctcgcg atcgcgcttc
     4141 acggcgtcaa gctcggcctt tacacgtacg tcgtcgccgt cgccgtgccc gcgttcttcg
     4201 cgctctggac catcatgctg ttcaattacg agcagcacgt gcacaccgat ccctggtccg
     4261 cacacaatca ttcgcgcagc tgggaccgtt tttgggtgaa cttcctgctg ttcaacaacg
     4321 gctaccacgc ggcgcaccac gagaacccgg gcacgcattg gagccggctc aaggccatcc
     4381 acgccgagct cgcgccgaag atcgacgcgc gcttgatcgt gaaggacaac ctctggctct
     4441 acttcgcgaa gcagtacctg ttcgcgccgt tctttccgag cctcggctcg cagcagatcg
     4501 ggcgcgcgcc gttcgacccg cccaatggtg agctcgaggt cgtcacttcc gcggacgtcg
     4561 acctcggcga agccggcacc aacacggcga tggtgagcta agggacgtcg ggcgctactc
     4621 tgcgggtagc gtccctacgc ccggtctcgc gggggccgct ggcttcgcgg agctgctgcc
     4681 cgcgttcgac gcgctgccgc tcggactctg cgcttgcggc ggggctttct cggccgcctt
     4741 ggcgggggct ttgcgtgttg cgagctcggc cgtgccctcg acgcggtcga gctccatgag
     4801 cgctgagcgg gcacgcgcgg cgtagccggt ttcgtcgagc agcgcttgat agctccgccg
     4861 cgccttttcg gtatcgccga gggtctggta gcaggcggcg gcttcccacg tcgcttcgta
     4921 gccggcgtgc gtgcccggat agtgcagtga aacttggtcg aagagcggcg cggccgcgcc
     4981 gcaaccctcg ccgctcttcg tcgcctgggc gccgtagagt gcggcttccg gcgcttgggc
     5041 gccgccccgc gcgacgacac tctcgaattg ctggcgcgct tccttgtaac ggcccgcgtg
     5101 gtacgcggcg agcgccgaca agtacacgcc gtcggttgcg acctcgtcct tcgcggccgg
     5161 ggcgaccgcg ggcgacggtg cggcttcggg cgccggccgc tgcggcgcca gcgtggtcgc
     5221 gggttccgct cggcgtgctt ccggcgcggc ggcgagcgcg ccgtgcgcgt cgttgcccgg
     5281 atcttgagcc gcacccttgg gcaaaaccgt gacgggttcc ggatcgttct cggcgacacc
     5341 gcgctcggtg acggacaccg tgtcgtggtc gctcggacgg ccgcggaaga aaacgagtcc
     5401 cgcgccgatc acgaggagca gcgtcgcggc catcgcgagc tgtggccgca tggcgtagcc
     5461 cgcgagcacc gacacggcgc ggccgaggcg tttgtcgagc ggcaagcggc cgtgcagctg
     5521 ccgctcggcg tcgaggatcc tgagctcgag tccgtcgggt ggatcgacga gcggcagcgc
     5581 gccgacttcg cgcgtcgcgc gcaggcctgc gaggatgccg cggcagcgca cgcagtgctc
     5641 gaggtggcgc cgcgccgcag ccgcggtgag ttcgtcgagc tcgtcgtaca agagatcgag
     5701 cacgctgcga tcgaagcgct cacaatccac ggcaaatcct cgcggttact agcacgggcc
     5761 accggcggtc gcctcgcggc tcgcccgctt ttcttccccg ctttccgtgt gcgagctcag
     5821 cggagcgcac gagcgtactc ctcgtagtcg gcgaggctcg ttcggagcct gtcgagcgcg
     5881 taacgcatcc ggctcttggc cgtgttctcg gcgacgccgg tgacctcggc gatttccttg
     5941 aacgacaggt ttccgagctc acgtagcaaa tacacttcgc gctgatcctc gggcagcgtc
     6001 tccactgcct gaatcagcgt cgcgcgtatc tgcagcgcag ccgtcgctcg ttccgcgtcc
     6061 ccatcgacgc gcttgctcgc gaccacgtct cctagcgagc gagcgtcgtc agcaggaccg
     6121 agcggctgct cgagcgacgg atgacgacgg tgcgcgagct tgcgcaaatg atcgacgcag
     6181 aggtttcgcg cgatcgcgta cgtccacgtc acgaagcgtg cctcttgctt gtactcgctc
     6241 gcgttctgca cgacgcgcaa gaacacgtct tgcgtgacct cctcggcgag cgtgggcagt
     6301 cgcagctgcc gcagcacgaa attgtagagg ccgcggtgat ggcgtcgcac gagcacggtg
     6361 aacgctcccc ggtcgccgcg ttggtagcgg accatcaatg tttcgtcaga tgcatcgccc
     6421 gggacggccg ccatggagca cgcgctgccg gcgacggcca aaaggttcga acccgtcgga
     6481 cgagcgactc gcgttcgagc cacccgccag ctgcttggac gtccaagctc ggggttcgat
     6541 ctccgtccgt ggcgcctgct cggagaagta cgcccggtgc aggcagtcag caagacccaa
     6601 gtaaaatcaa agggtaaccg tggaaaccga ccggccggtt cgccgtcgac gctcggcgct
     6661 cccggtgggc gctcgatcgg ggtggtgcga cttgcaccgg ggccttgccg gcgcccacga
     6721 cggaaaaagc agcggttccg aggacgtgtg agaggattcc gctttgtctc tgccgcggga
     6781 gggataagga tggccccgcg aacgtcatca cggtggaaag agccggcggg gcttcaccga
     6841 acagctccac ggccacgaac gagggaacat gaaacgctcg attgtcgctc tgtcgctggc
     6901 tgctgtcgcg gccctttcgc ttgctggtac tgcacaggga cagggggtca aggctacggc
     6961 gacggccaaa accacgacgc ccaaagcctc cggtacggcg agcgccgcac cgactacgag
     7021 cgcgccggcg gtcacgaccg cgacgccgac accgagcgcc gtcgcgcccc cggtgacgac
     7081 ggccgcgcct cccacgacta cggttcaacc gacgacgacg ctcgcgccgt
//
LOCUS       DATIML010000179         4327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3500948, whole genome shotgun sequence.
ACCESSION   DATIML010000179 DATIML010000000
VERSION     DATIML010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4327
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3500948"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..620
                     /locus_tag="VLJ38_03105"
     CDS             111..620
                     /locus_tag="VLJ38_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38521.1"
                     /translation="MKNDHVVLVRGRAHVKITVPCVVTLDPVALDLCPEIFLELEREP
                     EPVRTRPGGKANPLAVAAKSPEQKRTAKRGAERRAKRAKDDPELSAEDAAHDTFKGEE
                     IVLDGFFREFILLEIPPYPRRSDLPSPEESISSRPLADPKVEAKPLDPRLAPLLGIAS
                     RLKGSGNKE"
     gene            624..812
                     /gene="rpmF"
                     /locus_tag="VLJ38_03110"
     CDS             624..812
                     /gene="rpmF"
                     /locus_tag="VLJ38_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HSU38522.1"
                     /translation="MAVPKRRLSSSKRNMRRANHDKVTAPSIVPCPNCSAPMVPHRVC
                     PSCGHYKGRAVLKAKSDT"
     gene            897..1892
                     /locus_tag="VLJ38_03115"
     CDS             897..1892
                     /locus_tag="VLJ38_03115"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HSU38523.1"
                     /translation="MASERPGSQIIGTGAYAPEKVLTNQDLARIVDTSDEWIRERTGI
                     TERRVARDDEAASDMAYAASVRALEAAGLTAKDLDMIIVGTVTGDLPMPACAAILQRK
                     LGVTTIPAFDISAACAGFIYGLSIADKFVRTAACKRVLVVGVELLSRVLNWQDRATCV
                     LFGDGAGAAVIGPAGDDDRGVLSTQLYTDATLVDSLCIRAGGSREPLTTEGLAEKRHK
                     VFMVGSDIFKIAVKNLTSASRSALDAAGFTPSDVTWVVPHQANLRIIAQVALRLDIPL
                     ERFVLNIERYGNTSSASIPIALDEGVRDGRIKPGDTVLMCALGAGISWGSALVRM"
     gene            1914..2843
                     /gene="fabD"
                     /locus_tag="VLJ38_03120"
     CDS             1914..2843
                     /gene="fabD"
                     /locus_tag="VLJ38_03120"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HSU38524.1"
                     /translation="MTQAWLFPGQGTQEVGMGKALCEASPAARACFELADRALGFSLS
                     KLCFEGPQGELTLTKNAQPAILTASIAALNAWRDASPSLAEPSFAAGHSLGEYSALVA
                     AGALRFEDAVRIVHLRGRAMQEAVPEGQGAMAAIMGGEPEQVSALCAEAANGDVLSAA
                     NFNSPGQIVISGAAAAVARAVELAPSKKLKAIPLKVSAPFHSALMAPAARAVEAALAR
                     VEIGPLAFPVVANVDARPNAERARVAELLVRQVDGPVRWQESIAFMAEAGVTRAFEIG
                     PGKVLAGLVKRIDKRISVESRFDPASLVPAANG"
     gene            2973..3719
                     /locus_tag="VLJ38_03125"
     CDS             2973..3719
                     /locus_tag="VLJ38_03125"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HSU38525.1"
                     /translation="MFDLSGKVAFVTGGSRGIGRATAEALAEQGAHVVLTYVGNEEQA
                     RATVDAIVGAGRKAEAVRVDVADGRAAEQAIADAAKRLGRLDVLVANAGVAVDGLLLR
                     IKDEDFDKILNVNLKGAVACARAAIKVMMRAKTGRVIFVSSVVGEMGNPGQTAYAASK
                     AALLGVAKSLAKEYASRCITVNAITPGYVDTDMTSVMTAEMRDKTVAGIPLGRTGTTR
                     EIATAIAYLASDEAAYITGQTLRVNGGMYM"
     gene            3807..4055
                     /gene="acpP"
                     /locus_tag="VLJ38_03130"
     CDS             3807..4055
                     /gene="acpP"
                     /locus_tag="VLJ38_03130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSU38526.1"
                     /translation="MAEGRNITAEVKRIIKEQLDVDEKDIKPESTFIDDLGADSLGLV
                     ELVLAFEEAFEIDIPDEDTEKIRSVQDAVDYIEKHLAS"
     gene            4126..>4327
                     /locus_tag="VLJ38_03135"
     CDS             4126..>4327
                     /locus_tag="VLJ38_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HSU38527.1"
                     /translation="MERVVVTGLGLVTPNGIGADASWQSLINGKSGVGPITLFDTANG
                     YATRIAAEVRGFEAADFMEKKKI"
BASE COUNT          806 a         1450 c         1400 g          671 t
ORIGIN      
        1 agcgaggcgc caaagaagtc accttcacgt taaatgaggc ctggctgcgc caggccctga
       61 gcgacgctca agccgagccg ctcgagccgg gcgaggcgac ggtcgagctc atgaagaacg
      121 accacgtcgt gctcgtgcgc gggcgcgccc acgtgaaaat cacggtgccc tgcgtcgtga
      181 ccctcgatcc ggtggccctc gacctctgcc ccgagatttt cctcgagctc gaacgcgagc
      241 cggagccggt ccggacccgc cccggcggga aggctaatcc cctagcggtt gcggccaaaa
      301 gccccgagca gaaaaggacc gccaaacgcg gagctgaacg ccgtgccaag cgggccaagg
      361 acgaccccga gctctcggcg gaggacgcgg cccacgacac gttcaaaggg gaggagatcg
      421 tgctcgacgg cttcttcagg gaattcatcc tgctcgagat cccgccgtac ccccgccgtt
      481 ctgacttgcc ttccccggaa gaaagcataa gctcccgccc cctcgccgac ccgaaagtgg
      541 aggcgaaacc cttggatccg cggctggccc cgcttctcgg aattgccagc cgcctcaagg
      601 ggtccggaaa taaggagtag accgtggccg taccgaagcg acgcctgagc agcagcaagc
      661 gcaacatgcg ccgcgccaac cacgacaagg tgaccgcccc gagcatcgtt ccctgcccca
      721 attgctcggc gcccatggtt ccgcaccgcg tctgcccctc gtgcggccac tacaagggcc
      781 gcgccgtgct caaggcgaag tccgacacct gaaatcatgc tgcacggcgg cgtgccgcgg
      841 ctggttgaac catttttggt gacgccggca cgaggacgat cgtaatggag cggtccatgg
      901 cgagcgagcg gcccggcagc cagatcatcg gaaccggcgc ctacgccccc gagaaggtgc
      961 tgacgaatca ggacctggcg cggatcgtcg acacgtccga cgagtggatc cgcgaacgga
     1021 cgggcatcac cgaacggcgt gtcgcccgtg acgacgaagc cgcgagcgat atggcctacg
     1081 cggcgtcggt tcgcgcgctc gaggcggcgg ggctcacggc gaaggacctc gacatgatca
     1141 tcgtcggcac ggtgacgggg gacctcccga tgccggcgtg cgccgcgatc ctccagcgca
     1201 agctcggcgt gaccacgatc ccggcgttcg acatttcggc ggcgtgcgcg ggtttcattt
     1261 acggactctc gatcgccgac aagttcgtgc gtacggcggc ctgcaagcgc gtgctcgtcg
     1321 taggcgtcga gctcctgagc cgcgtgctca attggcaaga tcgggcgacg tgcgtgctct
     1381 tcggcgacgg cgccggcgcg gccgtgatcg gtcccgcggg tgacgacgat cgaggcgtgc
     1441 tctcgaccca gctctatacg gacgcgacgc tcgtcgattc gctgtgcatc cgcgcgggcg
     1501 gaagccgcga gcccctcacg accgaaggcc tcgccgaaaa acggcacaag gtattcatgg
     1561 tcgggtcgga catcttcaag atcgccgtga aaaacctcac gtcggcttca cgctccgccc
     1621 tcgacgcggc gggctttaca ccgagcgacg tgacctgggt cgtgccgcat caggcaaacc
     1681 tacgcatcat cgcgcaggtg gcgctcaggc tcgacatccc gctcgagcgc ttcgtgctca
     1741 acatcgaacg ctacggcaac acctcgagcg cttcgatccc catcgcactc gacgaaggcg
     1801 tgcgcgacgg ccgcatcaag ccgggcgaca ccgtgctcat gtgcgcgctc ggcgcgggca
     1861 tctcgtgggg cagcgctctc gtgcgtatgt agcgttcgtc cgtcgatcac ctcatgacac
     1921 aagcttggct atttcccgga caaggcacgc aggaagtcgg tatgggcaag gcgctctgcg
     1981 aggcctcgcc cgccgctcgc gcctgcttcg aactggctga tcgggcgctc ggattttcgc
     2041 tttcgaagct ctgcttcgaa gggccgcagg gcgagctcac gctgaccaag aacgcccaac
     2101 ccgcgattct caccgccagc atcgcggcct tgaacgcctg gcgagacgcc tctccgtcgc
     2161 tagcggagcc gagctttgcc gccggacatt cgctcggcga gtacagcgcg ctcgtcgccg
     2221 ccggtgcgtt gcgtttcgaa gacgccgtgc gcatcgttca cttgcgcggg cgcgccatgc
     2281 aagaagccgt gcccgagggt cagggcgcca tggcggcgat catgggtggg gagcccgaac
     2341 aagtaagcgc gctctgcgcc gaggccgcga acggcgacgt gctctcggcc gccaacttca
     2401 attcgccggg ccaaatcgtg atctcgggcg cggcggcggc cgtggcacgc gccgtcgagc
     2461 tcgcgccgtc gaaaaagctc aaagcgattc cgctcaaggt aagcgcgccg tttcactccg
     2521 cgctcatggc gccggccgcc cgcgccgtcg aagcagcgct cgctcgcgtc gaaatcggcc
     2581 cgctcgcctt ccctgtcgtc gccaacgtcg atgcccggcc gaacgccgag cgcgctcgag
     2641 tcgccgagct cctcgtgcgg caggtggacg ggccggtccg ctggcaggag tccatcgcgt
     2701 tcatggccga ggccggggtc acgcgggcgt tcgaaatcgg ccccggcaag gtgctcgcgg
     2761 gcctcgtgaa gcgcatcgat aagcgcattt cggtcgaatc tcgcttcgac ccggcgtcgc
     2821 tcgttcccgc cgcaaacggc tgaaaagcgg ccccgtaggg cgcaccgagc ccgaccgatt
     2881 gccgcgtcgc ggcaaaattt gggtgactgc gggtgtcaca atccgctttc aagcaaggga
     2941 gaccgtgcta aagaggccgc cgctcgcaca ccatgttcga ccttagcggc aaagtagctt
     3001 tcgttaccgg cggttcgcgc ggcatcggcc gtgccaccgc cgaagcgctt gccgaacaag
     3061 gggcgcacgt cgtcctcact tacgtcggga acgaggagca ggcgcgcgcc acggtggacg
     3121 cgattgtcgg ggccggccgc aaggcggagg ccgtacgtgt cgacgtcgcc gacgggcgcg
     3181 ccgccgaaca agccatcgcc gacgccgcca aacgtctcgg ccgcctcgac gtgctcgtcg
     3241 ccaacgcggg cgtcgccgtc gacggactcc tcttgcgcat caaggacgag gatttcgaca
     3301 agatcctcaa cgtgaatctg aaaggcgccg tcgcctgtgc gcgcgccgcg atcaaggtca
     3361 tgatgcgcgc gaagacggga cgggtgattt tcgtttcgag cgtcgtcgga gaaatgggca
     3421 accccggcca aaccgcgtac gcggcatcga aagccgcgct gctcggcgtc gccaagtccc
     3481 tggccaaaga gtacgcgtca cgctgcatca ccgtgaacgc catcacgccc ggctacgtgg
     3541 acaccgacat gacgagcgtg atgaccgcag aaatgcgcga caagaccgtg gccggcattc
     3601 ccctcggacg caccgggacg acccgcgaga tcgcgaccgc cattgcttac ttggcctcgg
     3661 acgaggcggc ctacatcacc gggcaaacgc tgcgggtgaa tggcggcatg tatatgtaac
     3721 tgctcgattt taccgacacc cccctaaaaa cgcatgcaag cgggcaagtc actggtgtag
     3781 acgcccccga gaacgaaaga ggcatcatgg ctgaaggtcg caacatcacg gccgaagtga
     3841 agcggatcat caaagagcag ctcgacgtcg acgaaaagga tatcaagccc gaatccacgt
     3901 tcatcgacga cttgggcgcc gactcgctcg gtttggtcga gctggtattg gccttcgagg
     3961 aagccttcga gatcgatatc ccggacgagg acacggagaa gatccgtagc gttcaggatg
     4021 cggtcgatta catcgagaag catctcgcga gctagccgtc ggctcggctg agcgagctca
     4081 cggcgggctc gctccggccg ggcgatggct cgtgcgaata acggcatgga gcgcgtcgta
     4141 gtcacaggtc tcggcctcgt cacgcccaat ggcatcggcg ctgacgcgag ctggcagtcg
     4201 ctcatcaacg gcaagagcgg cgtcggcccg atcacgcttt tcgacacggc gaacgggtac
     4261 gcaacccgca tcgccgcgga agtcagaggc ttcgaggccg ctgacttcat ggaaaagaag
     4321 aagatca
//
LOCUS       DATIML010000180         2791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5523305, whole genome shotgun sequence.
ACCESSION   DATIML010000180 DATIML010000000
VERSION     DATIML010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5523305"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VLJ38_03140"
     CDS             complement(<1..607)
                     /locus_tag="VLJ38_03140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSU38528.1"
                     /translation="MRRRRWPSFLVLAPAVVVLVGLSAALAIGEIGLQELRQQGDSAA
                     IRDSELLVKTLAARLGATLPSDRSPLLERAALRSGAEFLLADQDGAPLVDVTRGVEER
                     SLIARLIARGSGETKTALGRARFHAARLPRPWQRLWLIAFVGAPDAPFATSSLIRSVT
                     ALTALLVGGAALVAFSLARDVHADVRFVRGRIVAMARAKHQP"
     gene            complement(656..1282)
                     /locus_tag="VLJ38_03145"
     CDS             complement(656..1282)
                     /locus_tag="VLJ38_03145"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HSU38529.1"
                     /translation="MKQPKAERASFGLEKPPQGLTFLARAQLRRSPPASGRTVLVPID
                     VGDGPELWEAVEGSRWHLERWLPWVPFNSSPEASMRYAEACALDWDAGRAARFAVRDR
                     VTNELLGVVGLDSCVHLHRACELGYWLRREVTGRGLMTEAAQTCLDFAFQRMGVHRVR
                     CAAATDNAPSLRVIARLNFHFEGIARQAEWVGSRWLDHALFARLSSDE"
     gene            complement(1279..>2791)
                     /locus_tag="VLJ38_03150"
     CDS             complement(1279..>2791)
                     /locus_tag="VLJ38_03150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38530.1"
                     /translation="NRGASRSNGVGALLAAAAVVLGGYAAWLHWLHPAGERGAATAST
                     PRQALTASPRPKAAAKLATDPDTEPFAELVREAQGLFEKDPKGAVEKLKAAYALGSAA
                     PVRSLLSHASVAVDDATPRGCRVAAIARPRPYELDQAASQPALARTSEGVLLGWVDNH
                     ADARRRQGHVVLLDDALRRKGDALAVTPEATTVQDFAMLTAGDKVVVAFHDDSSKQPG
                     VYVRQLGPDGRIASPLHRVSRSKPSDGSLSFVATGDGGYLAVWAEELVAGSTDLVIQR
                     LGSTLEPAGEAQRLTALPPMKGVQERVSMPDAAVAHGELDVAFALLSPGQHAQVLLLS
                     MPLAELERGKSIEVAPRAGKRGAQPTEVVLGTLRSVAKTVGRVPQPRVACEKDGCLVG
                     WDEEKGGANVAFLERGKPQPLWHRDFADKGARPAVVGDDSGLATAWYEDARLKLAPLG
                     RDGVGLPSVVNRVSGLQPHPALARGSKTGEWLLAWRDFEAGHFELFALKAECP"
BASE COUNT          416 a         1014 c          997 g          364 t
ORIGIN      
        1 tgggttggtg cttggcgcgc gccatggcga cgatacggcc gcgtacgaag cgcacgtcgg
       61 cgtgcacgtc gcgcgcgagc gagaaggcga cgagcgcggc gccaccgacg agcagcgccg
      121 tgagcgccgt cacggagcga atcaaggagc tcgtcgcgaa cggcgcgtcg ggcgcgccca
      181 cgaaggcgat gagccaaagc cgttgccagg gtcgcggcag ccgcgcggcg tgaaagcgcg
      241 cgcgaccgag cgccgtcttg gtttcaccgg agccgcgcgc gatgagccgc gcgatgaggc
      301 tccgctcctc cacgccgcgc gtcacgtcga cgagcggcgc gccgtcctgg tcggcgagca
      361 gaaactccgc ccccgagcgc aacgccgcgc gctcgagcag cggggagcga tcgctcggca
      421 gggtcgcgcc gagccgcgcg gccagcgtct tcacgagcag ctcgctgtcc cggatcgccg
      481 cggagtcccc ctgctggcgc agctcctgca gcccgatctc accgatcgcg agcgccgccg
      541 agagcccgac gagcacgacg accgcaggcg cgagtacgag aaacgaaggc cagcggcggc
      601 ggcgcatgct gcgggattcg gcttggtcta acgctaaatc gccgcccgcg cccgctcact
      661 cgtcgctcga aagccgcgcg aagagcgcat ggtcgagcca gcgcgagccg acccactcgg
      721 cttggcgcgc gatgccctcg aagtggaagt tgagccgcgc gatgacgcgc aggctcggcg
      781 cattgtcggt cgcggcggcg cagcgcacgc ggtgcacgcc catgcgctga aatgcaaaat
      841 ccaggcaagt ctgcgccgcc tccgtcatga gtccccggcc ggtgacttca cgccggagcc
      901 aataaccgag ctcacaggcc cgatgcaggt gcacgcacga gtcgagtccg acgacgccga
      961 ggagctcgtt cgtcacgcgg tcgcgcaccg cgaaacgcgc cgcgcggccc gcgtcccagt
     1021 cgagcgcgca cgcctcggcg tagcgcatgc tcgcttcggg cgacgagttg aagggtaccc
     1081 acggcagcca gcgctcgagg tgccagcgcg aaccctcgac ggcttcccag agctcggggc
     1141 cgtcccccac gtcgatcggg acgagcacgg tgcggccgct cgcgggcggc gagcggcgga
     1201 gctgcgcgcg cgccaaaaac gtgaggccct gcggtggctt ttccaggccg aacgacgcgc
     1261 gttccgcttt gggctgcttc atggacactc cgctttgagg gcgaacagct cgaaatgccc
     1321 ggcctcgaaa tcgcgccagg cgaggagcca ttcacccgtt ttcgagccgc gcgcgagggc
     1381 gggatgcggc tggagcccgc tcacgcggtt gacgacgctc ggcaagccga cgccgtcacg
     1441 cccgagcggc gcgagcttca ggcgcgcgtc ctcgtaccac gccgtcgcga gtccgctgtc
     1501 gtcgccgacg acggccgggc gcgcaccctt gtcggcaaag tcgcgatgcc agagcggctg
     1561 cggcttgccg cgttcgagaa aggcgacgtt cgcccctccc ttctcttcgt cccagccgac
     1621 gaggcagccg tctttttcgc acgcgacgcg cggctgcggc acgcgcccca ccgtcttcgc
     1681 caccgacctg agcgtgccga gcacgacctc ggtcggctgc gcgccccgct tgcccgcacg
     1741 cggcgcgacc tcgatcgatt tgccgcgctc gagctcggcg agcggcatgc tgaggagcag
     1801 cacctgagcg tgctgaccgg gcgagagcag cgcgaaggcc acgtcgagct caccgtgcgc
     1861 gaccgcggcg tcgggcatcg acacgcgctc ttgcacgccc ttcatgggtg gtaacgcggt
     1921 cagacgctgc gcctcgccgg ccggctcgag cgtcgagccg agacgctgaa tcacgagatc
     1981 ggtcgagccg gcgacgagct cctccgccca aacggcgagg tagccgccgt cgcccgtcgc
     2041 gacgaacgag agcgacccat cgctcggctt gctgcgcgaa acgcggtgca agggggacgc
     2101 aatgcggccg tcggggccga gctgccgcac atagacgccg ggctgcttgc tgctgtcgtc
     2161 gtggaacgcg accacgacct tgtcgccggc cgtgagcatg gcgaagtcct gcacggtggt
     2221 cgcttcgggc gtcacggcga gcgcgtcacc tttgcggcgc agcgcatcgt cgaggagcac
     2281 gacgtgaccc tggcggcgac gtgcgtccgc gtgattgtcg acccagccga gcagcacgcc
     2341 ttcgctcgtg cgcgcgagcg ccggctgcga cgccgcttga tccagctcgt acggtcgcgg
     2401 ccgcgcgatg gctgcgacac ggcagccgcg cggggtcgcg tcgtcgacgg cgacgctcgc
     2461 gtgggacagg agcgaacgca cgggcgcagc cgaaccgagc gcgtacgccg ccttgagctt
     2521 ctcgacggcg cccttcgggt ccttttcgaa taggccctgc gcctcacgca cgagctcggc
     2581 gaacggttcg gtgtcgggat cggtcgcgag cttcgccgcc gctttcggcc gcggagaagc
     2641 cgtcagcgcc tggcgcggcg tgctcgccgt cgcggcgccg cgctcccccg ccgggtgcag
     2701 ccagtggagc cacgccgcgt agccgccgag cacgacggcc gctgcggcca agagcgcgcc
     2761 cacgccgttc gaacgcgacg cgccgcggtt g
//
LOCUS       DATIML010000181         3451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1479992, whole genome shotgun sequence.
ACCESSION   DATIML010000181 DATIML010000000
VERSION     DATIML010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479992"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1833)
                     /locus_tag="VLJ38_03155"
     CDS             complement(<1..1833)
                     /locus_tag="VLJ38_03155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38531.1"
                     /translation="MSALGGDIGVNAFLTDKPRVALNEPGPLLAGRYSLERPLASSEN
                     AQRWMAIEAASGRLVVVALAEPGRLSSFGRGVSHRHLVSILEVVKEVEPRAFPADVKL
                     PLGAGFAVAEHLPGKSLRTLLEAGPLHPAKAVAWTLRLADAVQALHVTGAVHGAISPR
                     SVVAEPTARAISPVLSQLIAPPVGPYCPPERLRGAAESASDDVWGLCATLYTMLTGKP
                     PFAGATREALLRAMAIRPAPLVNSGVTEPVLQEILWRGLSGERRTRSSDLNELQSLLD
                     HWEREPTRMPPPRQPPRVPPPRGLGEIVAGTAFAPGRDDGVLIDDSTCPDDQGAPVRD
                     AAAEQAAPQSLPPGVPASVPLAALEAPRLAPAAVDGVARPPLQRRISFNPFERKVSVW
                     PWVVVAALAGGGGVYVALGLGSKPDTAPPVASVEAPHVTAPKPVVKRNADVVRNECVE
                     EHFQAGAFEGTPDFAFVCEDGDFRATTHQLFGMAHDPEPVEEASGVEGGLKVDARHTG
                     KTASGARLAGLNWYELPATAIIRRTCCPNASPVLLPELPGWCEQLQSGVRRFADDSAK
                     SVDLGPDARSFDRAVGCLFAGHVKHGYSYQVPPAPGDRAMFQQFL"
     gene            2598..3002
                     /locus_tag="VLJ38_03160"
     CDS             2598..3002
                     /locus_tag="VLJ38_03160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38532.1"
                     /translation="MAKTDIDDRIRGMLEAFAGDLANLIRESAMQSVRDALGGESTGR
                     GGRRSGGGGMAAAPASRRLAKGAKRPPDEIVNLTAQLLDYVKAHKGERIEQIAKGMGV
                     STRELNLPVKKLIAGKSIRTRGQKRATQYFPK"
     gene            complement(3048..>3451)
                     /locus_tag="VLJ38_03165"
     CDS             complement(3048..>3451)
                     /locus_tag="VLJ38_03165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38533.1"
                     /translation="RDARSSSAVRTSILIGEAALTLAGVGVGIGYAFARDDAFAAVSK
                     ANADVDAVALENSDYCLENRGAAACKQMSSATEHFDQVVRRERVGFITAGTAAGLMIA
                     TWVFWPASAQRATVALSPSPGGALLCASGAF"
BASE COUNT          625 a         1153 c         1144 g          529 t
ORIGIN      
        1 caaaaattgc tgaaacatgg cgcggtcgcc cggcgcgggg ggcacttggt agctgtaacc
       61 gtgcttcacg tgtccagcga acagacagcc gacggcacga tcgaagctgc gcgcgtcggg
      121 tccgaggtcc acggatttcg cgctgtcatc cgcaaaccgg cgcacgccgg attgtagctg
      181 ctcgcaccag cccggtagct ccggcaggag cacgggcgac gcgttggggc aacaagtcct
      241 gcgaatgatg gccgtcgccg gcagctcgta ccaattgagg cccgcgaggc gcgcgccgct
      301 cgccgtcttg cccgtatggc gcgcgtccac cttgaggccg ccctcgaccc cgctcgcctc
      361 ttcgaccggc tcagggtcgt gcgccatccc gaagagctga tgcgtggttg cacgaaagtc
      421 gccgtcttcg cacacgaacg cgaagtcggg cgtgccctcg aacgcgcccg cttggaaatg
      481 ctcctcgacg cactcgttgc gcaccacgtc ggcgttgcgt ttgacgacgg gtttgggcgc
      541 agtgacgtgc ggcgcctcga cggaggcaac gggcggcgcc gtatcgggct tcgagccgag
      601 gccgagcgcg acgtaaaccc caccgccgcc cgcgagcgcg gctacgacca cccacggcca
      661 gacggagacc ttacgctcga acggattgaa cgagatgcga cgctggagcg gcgggcgcgc
      721 cacgccgtcg acagccgccg gagcgaggcg cggcgcttcg agcgcggcga gcggcaccga
      781 ggcgggcacg ccgggcggca gactctgggg tgccgcctgc tcggccgctg cgtcgcgcac
      841 gggcgcgccc tgatcgtccg gacacgtgga gtcgtcgatg aggacgccgt cgtcgcgccc
      901 gggcgcgaac gccgtccccg cgacgatctc tccgaggccg cgcggtggag gaacgcgcgg
      961 tggctgccgc ggaggcggca tgcgcgtcgg ctcgcgctcc cagtgatcga gcagcgactg
     1021 cagctcgttc aaatccgagg agcgcgtgcg ccgttcgccg gacaggccgc gccagaggat
     1081 ctcttgcaac acgggctcgg tgacgcccga gttcacgagc ggcgcgggac gaatcgccat
     1141 cgcgcgcagc agcgcttccc gagtcgcgcc cgcgaacggc ggcttgccgg tgagcatcgt
     1201 gtagagcgtg gcgcaaagcc cccaaacgtc gtcggaagca ctttcggccg cgccacgcag
     1261 ccgctcgggc gggcaatacg gaccaacggg cggcgcaatc agctgcgaga gcaccggcga
     1321 gatggcgcgc gccgtcggct cggcgacgac gctgcgcggg gaaatcgcac cgtgtaccgc
     1381 ccccgtcacg tgcaatgcct gcacggcgtc agcgagccgc agtgtccacg cgacggcctt
     1441 ggcagggtgg agcgggcccg cttcgagcag cgtccgcaag ctcttgcccg gcagatgctc
     1501 ggccacggca aagccggcgc cgagcggcag ctttacgtcc gccggaaacg ctcgtggctc
     1561 gacctctttc actacctcga ggatcgacac gagatggcgg tggctcacgc cacgaccgaa
     1621 gctgctgagt cggccgggct ccgcgagcgc gaccacgacc aagcgaccgc tcgccgcctc
     1681 gatcgccatc cagcgctgcg cgttttcact cgaagcgagc ggccgctcca agctgtagcg
     1741 gccggccaat agcgggccgg gctcgttcaa agccactcga ggcttgtcgg tgaggaacgc
     1801 gttcacgcca atatcgcccc cgagggcgct caccacaaac atagcattct cttctcgtca
     1861 gcgagacttc gatcgtctcc cctcacgcaa atcccgcgcc tttcgtgcga gaagcggcga
     1921 ccaaacacct tttacgccta cagagggtga tgtcatccga tgtgcgaaga ggtgcaccgc
     1981 gcgacacgca gcggcttccg aacgatccgg atttgcagcg agagaagcca gcgtgccccg
     2041 cgccaggcga cgagcgaacg acgacacgcg ctgcgagtcg aaacggatac accctatcct
     2101 tcgagccgag ccggcaagac cgatacatct tttcgtcgtc atgtcgacgc cgagacaggg
     2161 agcatcggtg actctaggcc tttgcggtct ggcgcggaaa acggcgcacg tcgcgtggaa
     2221 cgcgtaacac attgaaccag aatcacgcgg ccggtgttgc agttcgcccc aatcgtaatc
     2281 agcccgtgta atgtacgact cggagacgag cgggaggtgg ggccctttag cgcccacgct
     2341 cacggggtca agtgtagaaa caactccacc cgagagcgct tgaatgaaca ccgaattttc
     2401 gtggcttgca cccgtggcgg ccgcgaaatt ggctctttcg acggaggctt ttctgcgcct
     2461 gcttcttttg ttccatcacc gtagctgcgc tacgccgcaa actgtgtcgc ggattgtggc
     2521 gcaatgtggc tcgaagtcac gagtatcatg tgtgatttga cgttgacaga aaagccttgt
     2581 caccgtattg agcgcccatg gcaaagacag atatcgacga tcggatccgc ggcatgctcg
     2641 aggcgtttgc tggcgacctc gcgaatctca ttcgcgagtc ggccatgcag agcgtccgtg
     2701 acgcgctcgg cggcgagtcg acgggacgcg gcggccgccg cagcggcgga ggcggaatgg
     2761 cagcggctcc cgctagccgg cgcttggcaa aaggcgccaa acgcccgccg gacgagatcg
     2821 tcaacctgac cgctcagctg ctcgactacg tcaaagccca caagggcgaa cgtatcgagc
     2881 agatcgccaa aggcatgggc gtctcgacgc gcgagctgaa ccttcccgtg aagaagctga
     2941 ttgccggcaa gtcaatccgg actcgcgggc agaaacgcgc gacgcagtac ttcccgaagt
     3001 gacgcgtgcg ggggacgggc ggccgcttcg acgcgagcta ttgtgagtca gaacgctcca
     3061 ctggcgcaga gcagtgcgcc gcccggactc ggactcagag cgacggttgc tcgctgagct
     3121 gacgccggcc agaacaccca agtggcgatc atgaggcccg ctgccgtccc agccgtgatg
     3181 aaaccgactc tctcgcgcct gacgacttgg tcgaagtgct cggtggcgga cgacatctgc
     3241 ttgcaagcgg cagcacctcg gttttccaag caatagtcgc tattttcgag agcgaccgcg
     3301 tccacgtccg cgttcgcctt gctgaccgcg gcgaaggcgt cgtcccgggc aaacgcgtag
     3361 ccgatcccga caccgacccc ggcgagcgtt agggccgcct cgccgatgag gatgctcgtg
     3421 cgcacagcag agctggaacg cgcatcgcgc t
//
LOCUS       DATIML010000182         4208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_901904, whole genome shotgun sequence.
ACCESSION   DATIML010000182 DATIML010000000
VERSION     DATIML010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4208
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901904"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1098)
                     /locus_tag="VLJ38_03170"
     CDS             complement(<1..1098)
                     /locus_tag="VLJ38_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thrombospondin type 3 repeat-containing protein"
                     /protein_id="HSU38534.1"
                     /translation="MSKRTVCLQVFSLAASTATWAMAQEAPATGASGSVSLSPSNGVN
                     TSADATNAPPPAAPPPTTAPPPQPPAQPYEPYEPGLPPEANVLELGVFGGVLIPSPDH
                     NIRANGYAQQQYELGGEGGGRLGYYPLSFLGIEAEAMASGTHVKNTNNQGVLYGYRAF
                     LVVQAPTAWISPFLVGGYGRLGGVSHAMGGDVDQGWMFGAGAKIPLTHILGLRFDFRD
                     NLTPNDHVGSGQGHSFEILGGLSATIERSRKEPPPPPADSDHDGYADAVDKCPQDAGV
                     APEGCPADTDGDGVLDRDDYCPREAGPAPKGCPIIDTDPDKDGVPVPCDACPEEPGVK
                     PDGCPVRDKDGDGIPDNVDKCPNEPETKNGFE"
     gene            1474..2577
                     /locus_tag="VLJ38_03175"
     CDS             1474..2577
                     /locus_tag="VLJ38_03175"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSU38535.1"
                     /translation="MRAPDAALPLAAAAPVVWRVGTTGDYAPFSSRDASGKLQGFDVD
                     LASALARDSNAALRWVDVRWPRLQTTLEGGEVDLVMSGVTWQPARSVVGYMTRALARG
                     GPCVLGDAQGTPVAVNRGGVLETWARARFPENALVTVEDNQSLPGLLASGRVRAIVTD
                     SFELHAFARREWPSVCEPRLARKVYWIAPGHEALARDIDGWLATHAERVQAAQARWFG
                     ERQSLRALDHLTDLLARRLAFMPLVAEVKAKAGLAIEDLPREKLVLEASEQQAQKLGL
                     PAASARAFFALQIELAKAVQRRRREPTELELAQQIRPALNALGDRILEALGAAARQGE
                     LVTATLADLEALSPWLDANELRQLLDALHAFGA"
     gene            2627..3025
                     /locus_tag="VLJ38_03180"
     CDS             2627..3025
                     /locus_tag="VLJ38_03180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38536.1"
                     /translation="MVAVRRVVLKKAWIWLFAAAWLTAFFGTAPRERWHAAALRADAA
                     SIAPVPPRDAGQALVRDAHSLRIATPAPEPLPPLIPPHAAFAVEAPAGWCNDAVRVGT
                     RGITARIVRWRHHVPRMDSGEPPRSDAFAS"
     gene            3084..3242
                     /locus_tag="VLJ38_03185"
     CDS             3084..3242
                     /locus_tag="VLJ38_03185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38537.1"
                     /translation="MSDQHMSDRKDEAAKAGDVAPDSTQTPLATSYLPLWFLLAFVAV
                     VACGVLTK"
     regulatory      3393..3607
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3648..>4208
                     /locus_tag="VLJ38_03190"
     CDS             3648..>4208
                     /locus_tag="VLJ38_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HSU38538.1"
                     /translation="MDARSLAIGSFVFATAAPALASDPPAPIEVEVRGVPASPPPKEP
                     VLAGSVIRAERLQGPGLTAADALRTQPGVTVTDTGSFGGPATASIRGATAAETPTYLG
                     GVRLNDDVGGTADLSLVPLWLLDRIEIYRSGAPLEADQLGIGGAIFFEPRFPRATEAA
                     AGVTTGSFGKRGVFGHVAVGDERGALL"
BASE COUNT          621 a         1409 c         1487 g          691 t
ORIGIN      
        1 ctcgaagccg ttcttggtct ccggctcgtt cgggcacttg tcgacgttgt ccggaatgcc
       61 gtcgccgtcc ttgtcgcgca ccgggcagcc gtcgggcttg acgccgggct cttcggggca
      121 ggcgtcgcac gggaccggca cgccgtcctt gtccggatcg gtatcgatga tcgggcaacc
      181 cttgggcgcc ggaccggctt cgcgcgggca gtagtcgtcg cgatcgagga cgccgtcgcc
      241 gtcggtgtct gcggggcagc cttccggtgc gacgcctgca tcttgcgggc acttgtcgac
      301 cgcgtccgcg tagccgtcgt ggtcggagtc cgcgggcgga ggcggcggct ctttgcgcga
      361 gcgctcaatc gtcgccgaga ggccgcctag aatctcgaag ctatgccctt ggccgctgcc
      421 gacgtgatcg ttcggcgtca ggttgtcgcg gaaatcgaag cgcagtccga gaatgtgcgt
      481 gagcggaatc tttgcgccag caccgaacat ccagccttgg tccacgtcgc cgcccatggc
      541 gtgactcact ccacccaaac ggccgtaacc gccgacgagg aacggagaga tccacgcagt
      601 gggcgcctga acgaccaaga acgcgcggta gccgtacaga acgccttggt tgttcgtgtt
      661 cttgacgtgc gtcccggagg ccatggcctc ggcctcgata ccgaggaagg agagggggta
      721 atagccgagg cgaccgccgc cctcgccgcc gagctcgtac tgctgctggg cgtagccgtt
      781 ggccctgatg ttgtgatcgg ggctcgggat cagcacgccg ccgaaaacgc ccagctcgag
      841 cacgttggcc tcgggcggca ggcccggctc gtacggctcg tacggctgcg cgggtggctg
      901 cggcggcggc gctgtcgtcg gaggaggagc cgccggcggt ggagcgttgg tcgcgtccgc
      961 cgacgtattg acgccgttcg acggcgagag cgacacgctg cccgaagcgc ccgttgccgg
     1021 agcctcttgt gccatcgccc acgttgccgt cgaagcggcc aagctgaaaa cctgcaaaca
     1081 gacggtccgc tttgacatcg tgattggccc tctttcagcg ataagccggg tttggcccca
     1141 accgtatcgt ttattccgaa acgaccgcta tcagactccg agggcgcttg tccagaaggt
     1201 gcattggcgc agacaatgcg cgtcgacgat ttgtcccgcc tgtgccgagc tgccacaggc
     1261 cggcccgacg gagcgagtcg ttcacgcggc gcgtgctcgc aaatcagccc actttggagg
     1321 ctgatttggt atgccgggtc gatgcttaat aactgtcttg cgagcgcttg gtcgcgacgc
     1381 ggttcggcgc tcttactaag cttcgccctc atcggctgcg ggcgctcggg tcctcccgtc
     1441 gctgcgccca gcctagcggc cgcttcggta agcgtgaggg cgccggacgc tgccctgccg
     1501 ttggccgccg ccgcaccggt cgtgtggcgc gtggggacga cgggcgacta cgcgccgttt
     1561 tcgagccgtg atgcgagcgg aaaactccag ggtttcgacg ttgacctcgc gagtgcgctc
     1621 gctcgcgact cgaacgcggc cctgcggtgg gtggatgtgc gctggccgcg ccttcagacc
     1681 acgctcgagg gcggtgaagt ggacctcgtg atgtcgggtg tgacgtggca gccggcgcgc
     1741 agtgtcgtcg gctacatgac gcgcgcgctg gcacgcggcg ggccctgcgt gctcggcgac
     1801 gcgcagggga cgcccgtcgc ggtcaaccgc ggcggcgtgc tcgagacctg ggcgcgcgcg
     1861 cgttttcccg agaacgcgct cgtgacggtc gaggacaatc agagcctgcc ggggttactc
     1921 gcgagcggcc gcgtgcgtgc catcgtcacc gatagcttcg agctccacgc gtttgcacga
     1981 cgcgaatggc cgagcgtctg tgagcctcgg ctcgcgcgca aagtgtattg gattgcgccc
     2041 ggacacgagg cgctcgctcg cgacatcgac ggctggctcg cgacgcacgc cgagcgggtg
     2101 caagcggcgc aagcgcgctg gttcggcgaa cgtcagtcgc tccgcgcgct cgatcacctg
     2161 accgatttgc tcgcgcgaag gctcgcgttc atgccgctcg tcgccgaggt caaagccaag
     2221 gccggacttg cgatcgagga cttgccgcgc gaaaagctcg tgctcgaggc gagcgagcag
     2281 caggcgcaaa aactcggact gcccgccgcg agcgcgcgtg cgttctttgc gctgcaaatc
     2341 gagctcgcca aagccgtgca gcgccgccgg cgcgagccga ccgagctcga gctcgcgcag
     2401 cagatccgac ccgcattgaa cgcgctcggc gatcgcatcc tcgaggcgct cggcgcggcg
     2461 gctcgccaag gcgagctcgt cacggcgacg ctcgcggatc tggaggctct gtcgccgtgg
     2521 ctcgacgcga acgagctcag gcagctgctc gacgcgctcc acgccttcgg cgcgtgaggg
     2581 tcgcaccgcg cgcttgcagc ggtcgggcgg gaagctatgc tggcaggtgg ttgccgtgcg
     2641 tcgcgtcgtg ctgaaaaaag cctggatttg gctgtttgcc gcggcgtggc tgacggcgtt
     2701 cttcgggacg gcgccgcggg agaggtggca cgctgcagcg ctgcgtgctg acgcggcgag
     2761 catcgcgccg gtgccgcctc gcgacgccgg tcaggcgctc gttcgcgacg cgcactcgct
     2821 gcggatcgct acgcccgccc ccgagccgct gccgccgctc atcccgccgc acgccgcgtt
     2881 cgccgtcgaa gcgcccgcgg gttggtgcaa cgacgccgtt cgcgtgggca cgcgcgggat
     2941 caccgcgcgc atcgtacgct ggcgtcatca cgtcccacgc atggattccg gggagcctcc
     3001 ccgaagcgac gcgttcgctt cctaaccgca cgaggctcga accccgaacg tctctcctca
     3061 gcgagagaca gaaggactga tccatgtccg atcagcatat gtccgatcgc aaggacgaag
     3121 cggcgaaggc cggcgacgtc gcaccggact cgacccaaac tccacttgcc acttcgtatt
     3181 tgccgttgtg gtttctgttg gcgttcgtcg ccgtggtggc ttgcggcgtg ctcacgaaat
     3241 gagggcgccc caggccaggc gttgaagtcg agttgaaact gcaccgcacg cgggagcgcc
     3301 agccggcgtt cccgcggcgg agctttgtcc ggccgaagcg ccgctcgcgc caaagcgagg
     3361 gcgtgccctt gtgcgggcgg cccgtcgcgt gtacatagcc gcccgcaagc ggtctccctc
     3421 cggaatgtct cggagggggt gaaaagggaa cccggtgcaa ttccgggact gtcccgcagc
     3481 ggtgagcagg aacgaccgcc gtcacacgca ctggtcgtaa gaccgggaag cgacggccag
     3541 taggagccct ggcttaggcc agaagtgccc gcgagtccga agacctgccg gttgccgcgt
     3601 gcacgagcac gcgacctcgt ctcgaccctc cgcaggaaag aggacagatg gacgcccgat
     3661 cgctcgcgat cggtagcttc gttttcgcca ccgcagcacc ggccctcgcg agcgacccgc
     3721 ccgcgcccat cgaggtcgag gtgcgcggtg tgcccgcgtc gccaccgccg aaagagccgg
     3781 tcctcgccgg cagcgtgatt cgcgccgaac ggctgcaggg gccgggcctc accgcggcgg
     3841 acgcgctgcg gacgcagccg ggcgtgacgg tgacggacac gggcagcttc gggggccccg
     3901 cgacggcgag cattcgggga gcgacggcgg cggagacgcc gacgtatctc ggcggcgtac
     3961 ggctgaacga cgacgtcggc ggcacggccg atctgtcgct cgtgccgctc tggctgctcg
     4021 atcgcatcga aatctaccgt tccggagcgc cgctcgaagc cgatcagctc ggcatcggcg
     4081 gggcgatttt tttcgaaccg cgctttccgc gcgcgaccga ggccgcggct ggcgtcacga
     4141 cgggcagctt cggcaagcgc ggcgtgttcg gtcacgtcgc cgtgggcgac gagcgaggcg
     4201 cgctgctc
//
LOCUS       DATIML010000183         4342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3212776, whole genome shotgun sequence.
ACCESSION   DATIML010000183 DATIML010000000
VERSION     DATIML010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4342
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3212776"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..967)
                     /locus_tag="VLJ38_03195"
     CDS             complement(<1..967)
                     /locus_tag="VLJ38_03195"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HSU38539.1"
                     /translation="MIHVRRLIEHRFSLEPPLRSAAGSWHERHSLLLVVEDDAGHVGL
                     GEAAPLPGFSADTLETARDALLPLLGEALPERETSLSASEALSAASSSLTSPAARAAI
                     EAALLDVWSRQSASPAWTLLRADVDGPARDLTLAEWLPDGVDVALGAARSAQGRGIGA
                     FKVKLDARRGLEDGVRTLEALRAALGPEVSLRADANQSATLRELEPYLERLRAVRLEW
                     LEEPTSEPLTEAIGVPVALDESLARAPGLADLGERPFVAALVLKPTALGGISRCLALG
                     RHARALGRVPCASHTLEGPLGFMAAAAVAVTFGPACAHGLAPHRAL"
     gene            complement(964..1890)
                     /locus_tag="VLJ38_03200"
     CDS             complement(964..1890)
                     /locus_tag="VLJ38_03200"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046428 - 1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HSU38540.1"
                     /translation="MTTLAFEGVRPGSLRAWVIAARPPTLSAALVPVAVGTACAAAEG
                     SLKAGPALAALAGALLLQVAANFANDVFDYEKGADTAERLGPVRAVQAGLLSPSTVRR
                     GLYFVIALALLVGVYLAATAGPVIIALGLASIAAAVAYTGGPYPLGYHGLGDVFVMLF
                     FGFVAVLGTTFVQVGHLTELAIWAAVPVGALATAILVVNNLRDIETDRVAGKRTLAVR
                     WGERGALAEYALLLALAYGVPVALFARGHETTTILLPLLTLPLGVGLVRAVARERGRA
                     LNPLLKRTALLLLAYGLLFALGLVLTPLGTTR"
     gene            complement(1887..2711)
                     /gene="menB"
                     /locus_tag="VLJ38_03205"
     CDS             complement(1887..2711)
                     /gene="menB"
                     /locus_tag="VLJ38_03205"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002627103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HSU38541.1"
                     /translation="MSDIVWKKVEGYEDVVYEKSDEGIAKITINRPEVRNAFRPLTVT
                     EMSRAFADARDDADVGVVILTGAGRDAFCAGGDQKVRGHGGYVGSDGVPRLNVLDLQR
                     QIRTLPKPVVAMVAGYAIGGGHVLHMMCDLTIAADNARFGQTGPKVGSFDGGYGAAYM
                     ARIVGQKKAREIWFLCRQYDAKQALDMGLVNRVVPYEELENETVTWCREMLQHSPMAL
                     RCLKAALNADCDGQAGLQELAGNATLLFYLTEEGREGRDAFVEKRKPNFRKFKRLP"
     gene            complement(2745..3470)
                     /gene="menH"
                     /locus_tag="VLJ38_03210"
     CDS             complement(2745..3470)
                     /gene="menH"
                     /locus_tag="VLJ38_03210"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070205 -
                     2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HSU38542.1"
                     /translation="MTLVLLHGFTGSPASWDAVAAALGGPPPLRLALLGHGATDTDRV
                     QTFEDEVARLASHLPPERVHLAGYSLGARLALGVALAYPERVERLTLVSGQAGLASEF
                     ERNERRRADGRWCSLLEQLGVAAFVDAWEAQPLFATQSRLSHELRASRRSERLSHDPQ
                     GLVRSLRVTGLAEMPHYAPRLGSLSMPVMVLAGELDPKFLALGRDLAAAVPRGRFVVV
                     PNAGHDLLLEAPDLVARELLRAI"
     gene            complement(3467..>4342)
                     /locus_tag="VLJ38_03215"
     CDS             complement(3467..>4342)
                     /locus_tag="VLJ38_03215"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSU38543.1"
                     /translation="GLELWLAEHPQISLHVLAEHGYPDALGRAHTLTVAPIEALLEAL
                     TRALASHEPRAEQRAFTERVERANELAWRSVLRVAERTASFGEPEAVRVALESIPAGG
                     LLVLGNSLPVRLVDSFVPAAGARVRVASQRGANGIDGLVAGAAGSALAARCPTLLLLG
                     DVSLAHDVGGLAAARLVRTPLALVVLDNGGGRIFEQLPVAKLWERAPERAELWLTPPA
                     LAFEHAAALFELPYAAPRDAGELRTALARAFEHRGATLVHVRVEPHGARETTRAVLAE
                     LERTLTEVLDPGARA"
BASE COUNT          696 a         1486 c         1561 g          599 t
ORIGIN      
        1 gcagcgctcg gtgcggtgcc aagccgtgcg cgcaagcggg accgaacgtc accgcgactg
       61 ccgccgccgc catgaagccg agcggacctt cgagcgtgtg cgacgcgcaa gggacgcgac
      121 cgagtgcgcg tgcgtggcgc ccgagtgcga ggcaacgtga aattccgccg agcgccgtcg
      181 gtttgagcac gagcgcagcc acgaacgggc gctcgccgag gtcggcaagg cccggtgccc
      241 gcgcgagtga ctcgtcgagc gcgacgggca cgccgatcgc ttcggtcagc ggctccgaag
      301 tcggttcttc gagccattcg agacgcaccg cgcgcaggcg ctcgaggtac ggctcgagct
      361 cacgcagggt cgcgctttgg ttggcgtcgg cgcggagcga aacctcgggt ccgagcgccg
      421 cgcgcagcgc ctcgagcgtc cgaacgccgt cttcgagccc acgccgcgcg tcgagcttca
      481 ccttgaacgc gccgatgccg cgcccttggg cgctccttgc ggccccgagc gccacgtcca
      541 cgccgtccgg tagccactca gccagcgtta ggtcgcgcgc cggtccgtcc acgtccgcgc
      601 gcaagagcgt ccacgcgggc gacgcgcttt gtcgcgacca aacatcgagc agtgccgcct
      661 cgatcgcggc gcgtgcagcg gggctcgtca ggctcgaact tgcggccgac agtgcttcgc
      721 tcgcgctgag cgaagtctcg cgttccggga gcgcttcacc gagcaacggt agaagggcgt
      781 cccgcgccgt ttcgagcgtg tccgcggaga agccgggcag gggcgcagct tcgccgaggc
      841 cgacgtgccc agcatcgtcc tcgacgacga ggagcagcga gtggcgttcg tgccagctgc
      901 cggcggcgct tcggagcggc ggctcgagcg agaagcggtg ctcgatgaga cgccggacgt
      961 ggatcaccgc gtggtcccga gcggggtcag gacgaggccg agcgcgaaga gcaacccgta
     1021 cgcgagcagc agcaacgccg ttcgcttcaa taagggattg agcgcacggc cgcgctcgcg
     1081 cgccacggct cgtacgagcc cgacgccgag cggcagggtc aaaagcggca gcaggatcgt
     1141 cgtcgtctcg tggccgcgcg cgaatagcgc gacggggacg ccgtacgcga gcgcgagcag
     1201 gagcgcgtat tcggcgagtg cgccgcgttc gccccagcgg acagcgagcg tgcgcttccc
     1261 ggcgacgcgg tcggtctcga tatcgcgcag gttgttgacg acgaggattg cggtcgcgag
     1321 cgctcccacg ggcactgccg cccaaatagc gagctcggtg aggtgcccaa cttgcacgaa
     1381 ggtcgtgccg agcaccgcga cgaacccgaa gaagagcatc acgaaaacgt cgccgagccc
     1441 gtgatagccg agcgggtacg gtccgcccgt gtacgccacg gccgcggcga tcgaggcgag
     1501 cccgagcgcg atgatgacgg ggcccgccgt cgcggcgagg tacacgccga cgagcagcgc
     1561 gagcgcgatc acgaagtaga gcccccggcg caccgtgctc ggcgagagca atcccgcttg
     1621 cacggcgcgc acggggccga gccgctcggc ggtgtcggcg cccttctcgt agtcgaagac
     1681 gtcgttcgcg aagttggcgg cgacctgaag cagcaatgcc cccgcgagcg cggcgagggc
     1741 cggcccagcc ttgagcgagc cctcggccgc ggcgcatgcc gtccccacgg cgacgggcac
     1801 gagcgccgcg ctcaaggtcg gcggacgcgc cgcgatgacc caggcgcgca gcgagccagg
     1861 gcgtacgcct tcaaaagcca gcgtcgtcac ggaagtcgtt tgaatttccg gaagttaggc
     1921 ttccgcttct caacgaaagc atcgcgtcct tcgcgacctt cttccgttag ataaaagagg
     1981 agcgtcgcgt tgcccgcaag ctcttgcaaa ccggcttgtc cgtcgcagtc ggcgttgagc
     2041 gcggccttca ggcagcgcag ggccatcggg ctgtgctgga gcatctcgcg gcaccaggtg
     2101 acggtctcgt tttcgagctc ctcgtagggc accacgcgat tgacgagccc catgtcgagc
     2161 gcctgcttgg cgtcgtactg gcgacacaga aaccaaatct cgcgtgcctt cttctgcccg
     2221 acgatgcgcg ccatgtaagc ggcgccgtaa ccgccgtcga agctcccgac cttgggcccc
     2281 gtctgaccga agcgcgcgtt gtcggccgcg atcgtgagat cgcacatcat gtgcagcacg
     2341 tgaccgccgc cgatggcgta gccggcgacc atggcgacca cgggcttggg caaggtgcgg
     2401 atttgccgct gcagatcgag cacgttcagg cgcggcacgc cgtcggaacc gacgtagccg
     2461 ccgtggccgc gcaccttctg atcgccgcct gcacagaagg cgtcgcgtcc ggcgcccgtc
     2521 agaatcacca ccccgacgtc ggcgtcatca cgcgcgtccg cgaacgcgcg gctcatctcc
     2581 gtcaccgtga gcggacgaaa agcgttccgc acctcgggcc gattgatcgt gatcttggcg
     2641 atgccctcgt ccgacttctc gtagacgacg tcttcatagc cttcgacctt tttccaaacg
     2701 atatcgctca tgacgaatga tcctcggtgt tggtccctga gagtttagat cgcccgcagc
     2761 agctcccgcg ctaccagatc gggagcttcg agcaagaggt cgtggccggc gttggggacg
     2821 acgacgaagc ggccgcgcgg gacggcagcg gcgaggtcgc ggccgagcgc cagaaatttc
     2881 ggatcgagct caccggcgag caccatgacc ggcatggaca gcgagccaag acgaggcgcg
     2941 tagtgcggca tctcggccag gcccgtcacc cgcagcgaac ggacgagccc ctgcgggtcg
     3001 tggctcagtc gttcgctccg gcgcgacgcg cggagctcgt gcgagagccg cgactgtgtc
     3061 gcaaacaacg gctgggcttc ccaagcgtcg acgaacgccg cgacgccgag ctgctcgagc
     3121 aagctgcacc agcggccgtc cgcgcgtcgg cgctcgttgc gctcgaactc ggacgcgagg
     3181 ccggcttggc cgctcacgag cgtgaggcgc tcgacgcgct caggataggc gagggctacg
     3241 ccgagcgcga ggcgcgcgcc gagtgaatag ccggcgaggt ggacgcgttc cggcggtaag
     3301 tgcgaggcaa gtcgcgccac ctcgtcttcg aaggtctgaa cccggtcggt gtcggtggct
     3361 ccatggccga gcagcgccag gcgcagcgga ggtgggccgc cgagcgccgc tgcgacggcg
     3421 tcccaactcg ctgggctgcc cgtgaagccg tggaggagca cgagcgtcac gcgcgcgctc
     3481 cggggtcgag aacttcagta agcgtgcgct cgagctcggc caggacggcg cgggtcgtct
     3541 cgcgcgcgcc gtgcggttcg acgcggacgt gaacgagtgt cgcgccccgg tgctcgaagg
     3601 cgcgggcgag ggcggtgcga agctcgccgg catcgcgcgg cgcggcgtac ggcagctcga
     3661 agagagccgc ggcgtgctcg aacgcgagcg cgggcggcgt gagccacagc tcggcgcgct
     3721 ccggcgcccg ttcccatagc ttggcgacgg gcagttgctc gaagatgcgg ccgccgccgt
     3781 tgtcgagcac gaccaacgcg agcggcgtgc ggacgagacg cgccgccgcc agcccaccga
     3841 cgtcgtgcgc gaggctcacg tccccgagca agagcaacgt cgggcagcgc gcagccagcg
     3901 ccgagccggc ggcaccggcg accagcccgt cgatgccgtt cgcgccgcgc tgggaggcga
     3961 cgcgcacccg agcgcctgcc gcgggcacga aggagtcgac cagacgcacc ggtaggctat
     4021 tgccgagcac gagtaggccg cccgccggga tactctcgag cgcgacccgt acggcttccg
     4081 gttcgccgaa tgacgccgtt cgctccgcaa cgcggagcac gctgcgccag gcgagctcgt
     4141 tcgcgcgttc gacgcgctcc gtgaaggcac gttgctcggc gcgcggctcg tgcgaagcga
     4201 gcgctcgcgt cagcgcttcg agcagtgctt cgatgggcgc gaccgtcagc gtatgcgcgc
     4261 ggccgagtgc gtcggggtag ccgtgctcgg cgagcacgtg tagcgagatc tgcgggtgct
     4321 cggcgagcca cagctcgagt cc
//
LOCUS       DATIML010000184         4691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_36839, whole genome shotgun sequence.
ACCESSION   DATIML010000184 DATIML010000000
VERSION     DATIML010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4691
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36839"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VLJ38_03220"
     CDS             <1..490
                     /locus_tag="VLJ38_03220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38544.1"
                     /translation="FGGAPAFAAGAAEGFDPIVAEMLGPLVTPAGSVPRSEGGGFLVL
                     EAESAARARSAVRLAHIEGPWPLSPTFPAPPPRDRERALVIVTAPSERALAALDACAW
                     ATCPRRSVLRATGYHEAVSGLSLAAAAALVGVGAASEVLVVSSSERSDWVTLFRDPGT
                     AR"
     gene            487..2304
                     /locus_tag="VLJ38_03225"
     CDS             487..2304
                     /locus_tag="VLJ38_03225"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HSU38545.1"
                     /translation="MTPVAVVARGAVSALGAGSAATHVGDVGKAPGALARDDLELARA
                     GLRKPRAARAAVTLSLDGADRARTLLELVSRELAARLDVAVPRWQRLRLALAVGTSAG
                     GLGSLERALALRAEGAPLSQRVARDALYDGPLDALDASFGHGAPRVQLLGACIASTFA
                     LGLAARWLDAGHADLVIAGGYDALCPFLAAGFEALGATTGDDPAPFRAARDGMVLGEG
                     AALVALMRAADAPSAEGFVLGFGAASDARHVTAPDPEGRGLARAARRALADAGVDAGT
                     IELVSAHATATPHNDAAEAAALRSVFGAHLARVPVHPFKGVIGHTLGAAGALESLAAL
                     DAMRHGILPGAVGNGAVDAVFGARLLDTNVAGHAARCLKLSAAFGGANAALVLSTEPA
                     DVSGARSTRDVTLLATGPLVTAPDLELLAARTRLDELRRSRLDRASALAVTAAASVLA
                     ELPELDPETTAVIVGTSAASLEADEGFDQRRRERGAAFVEPRRFPATSPNLPAGWCAI
                     AFGWQGPSVAVGGGPGAAEQALLVAYDLVAAGDAEHAVVITCDDVGPVTCDLYGAARL
                     EPPRDGARALVLGVRGGPPLRRPVLTRADPVQEPLPDAR"
     gene            2429..2908
                     /locus_tag="VLJ38_03230"
     CDS             2429..2908
                     /locus_tag="VLJ38_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38546.1"
                     /translation="MLRASALLLAIGLSLPAVACTHEYLPNTDVEDNDFNRRVIEFCE
                     DYRHAVEHKNVGILLRLADERYYEDGATIDTSDDLDLAGLKAYLETKFKDVKSIRYEI
                     HYRNVSFGRNKEIYVDYTYSASYQIPTSKGDMWRRTVADNRLALSTKGESFKILSGM"
     gene            complement(2931..3428)
                     /locus_tag="VLJ38_03235"
     CDS             complement(2931..3428)
                     /locus_tag="VLJ38_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38547.1"
                     /translation="MTALPKPASHPAGTDVEPPTAWPASGRAGTTRDGLVVLETPPDP
                     DAAHGVVAAFFRAVVEESPRALGLLLAPNAMMQNGTRREGATSAWSSRFARYDYRSLA
                     GETIYRDADIRVSKDQDDWMLEVPIDVAWGGRPRMLGDTLTFRLAPSGPSFVIEEILE
                     DFRSP"
     gene            complement(3523..4353)
                     /locus_tag="VLJ38_03240"
     CDS             complement(3523..4353)
                     /locus_tag="VLJ38_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HSU38548.1"
                     /translation="MARMFGFIGNRADLGALVLASSADVLKERRAPDQPLGWGIGFYQ
                     AGEVLLRRRPLDDREVIDLAEAADDVRADVLLGHVRLASVGALRTENTHPFRYRSWLW
                     AQTGTILGFERLRPRLLEAQPEFLRRNVRGETDSELFFYLFLSFLHDAGHLESGHASY
                     EAISAALRASIALVDRLSAEEGHGPNSGDILVTNGERMVGVHRNGNMAYRVLHGRYEI
                     EGLLGEDTMRRARIPSLDSTHFSLIVSEAANVPQSFRQIDGRSLVSLSRTDDPVLEPL
                     "
     gene            4453..>4691
                     /locus_tag="VLJ38_03245"
     CDS             4453..>4691
                     /locus_tag="VLJ38_03245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38549.1"
                     /translation="MQTRVLSLSLLIGTFACSAVYPELSSPLRTPPPDFHLEPPPPSD
                     LFFFRFAGADIPTKTRDGRHWDSVGGEAPDPYAKLL"
BASE COUNT          684 a         1661 c         1597 g          749 t
ORIGIN      
        1 attcggtggc gcgccggcct tcgccgcagg cgccgccgag ggcttcgatc cgatcgtcgc
       61 cgagatgctc ggcccgctcg tcacacccgc aggttcggtg ccgcgctcgg agggaggcgg
      121 ttttctcgtg ctcgaagccg agagcgcggc gcgtgctcgc agcgccgtgc ggctcgcgca
      181 catcgaaggt ccctggccac tctctccgac atttccggcg ccgccgcctc gcgatcgcga
      241 acgcgcgctc gtcatcgtga cggcgccgag cgaacgcgcg ctcgcggcgc tcgacgcttg
      301 cgcctgggcc acgtgtccgc gacgttccgt gctgcgcgcg accgggtatc acgaagcggt
      361 cagcgggctt tcgctcgccg ccgcagcggc gctcgtcggt gtcggcgctg ctagtgaggt
      421 gctcgtcgtg agtagctccg agcggagcga ctgggtcacg ctcttcagag accctgggac
      481 ggcgcggtga ctccggtcgc ggtcgtcgcg cgcggcgccg tttcggcgct cggtgccggc
      541 agcgcggcca cgcacgtcgg cgacgtgggg aaggcgcccg gcgctctcgc gcgcgatgac
      601 ctcgagctcg cccgcgctgg gttgcgcaag ccgcgcgctg ctcgcgcagc cgtcacgctc
      661 agcctcgacg gcgcggatcg cgcgcgcacg ctgctcgagc tcgtttcacg cgagcttgcc
      721 gcacgactcg acgtagccgt cccgcgctgg cagaggctcc ggctcgcgct cgccgtgggc
      781 acctcggcgg gcggcctcgg cagtctcgaa cgtgcgctcg cgctccgtgc cgagggtgcg
      841 ccgctctcgc agcgagtcgc tcgggatgcg ctctacgacg gtccgcttga cgcgctcgac
      901 gcgtcgttcg gccacggcgc cccgcgcgtc cagctgctcg gcgcgtgcat cgcgtcgacg
      961 ttcgcgctcg gcctcgcggc gcgctggctc gacgcgggcc acgccgactt ggtgatcgcg
     1021 ggcggctacg acgcgctctg tcccttcctc gctgcgggct tcgaggcgct tggcgcgacg
     1081 accggcgacg atcctgcgcc ttttcgtgct gctcgcgacg gcatggtgct cggcgaaggc
     1141 gcggcgctcg tcgcgctgat gcgcgccgcg gacgctccga gcgccgaagg tttcgtgctc
     1201 ggcttcggcg cagccagtga cgcgcgccac gtgacggcac ccgatccgga gggcagggga
     1261 ctcgcgcgcg cggcccgtcg cgctctcgcc gacgcgggcg tagacgcggg cacgatcgag
     1321 ctcgtgagcg ctcacgcgac ggccacgcct cacaatgacg cggcagaagc cgccgcgctc
     1381 cgcagcgtct tcggggccca cctcgcgcgc gtgcccgtgc atccgttcaa gggcgtcatc
     1441 ggtcacacct tgggggcagc cggcgccctc gagagcctcg ccgcgttaga cgcgatgcgg
     1501 cacggcatct tgccgggcgc cgtgggcaac ggagccgtgg acgccgtttt tggggcgcga
     1561 ctgctcgaca cgaacgtcgc cggacacgcc gcgcgctgtc tgaaactgag cgcagcgttc
     1621 ggcggtgcca acgccgcgct cgtcctgagc accgagcccg ccgatgtgag cggcgcgcgg
     1681 agcacgcgcg acgtgacgtt gctcgccacg gggccgctcg tgaccgcacc ggacctggag
     1741 ctactcgccg cgcgcacgcg cctcgacgag ctccggcgct cgcgtctcga ccgcgcgagc
     1801 gcgctcgccg tgacggctgc ggccagcgtt ctcgccgagc tccccgagct cgacccggaa
     1861 acgacggctg tcatcgtcgg caccagcgcg gcctcactcg aagcggacga gggcttcgac
     1921 cagcgccgcc gcgagcgcgg cgcggccttc gtggaaccgc gtcgcttccc cgcgacgtca
     1981 ccgaatttgc cagccggttg gtgcgcgatt gcgttcggct ggcaaggacc gagcgttgcc
     2041 gtaggcggcg gtccgggcgc cgccgagcag gcgctgctcg tggcttacga cttggtggct
     2101 gccggtgacg ccgagcacgc cgtcgtgatc acctgcgatg acgtcggacc cgttacctgc
     2161 gacctttacg gcgccgcgcg actcgagccc ccgcgcgatg gtgcgcgtgc tctcgtcctc
     2221 ggcgtcaggg gtggtccccc tctgagacgg cccgtactca cgcgagccga cccagttcaa
     2281 gaaccacttc ctgatgcccg gtaggatcgt ccggcggccc tagggccggg agccgccgca
     2341 aagcgagtag cggcggcggc ttgcgggatg gtagcgtccg ccgccggaat gcgccgccga
     2401 gtagcggcgt tcttgctccc gtccccgcat gttgcgcgct tcagccctcc ttctcgccat
     2461 cggtttgagt cttccggcgg tcgcctgtac ccacgagtac ctgccgaaca ccgacgtcga
     2521 agacaacgac ttcaatcgtc gcgtcatcga gttctgcgag gactaccgcc acgcggtcga
     2581 gcataagaac gtcgggatct tactgaggct cgccgacgag cggtactacg aggacggcgc
     2641 gacgatcgac acgagcgacg acctcgatct cgccgggctc aaggcgtacc tcgagacgaa
     2701 gttcaaggac gtaaagtcga tccgctacga gatccactac cggaacgtct cgttcggccg
     2761 caacaaagag atttacgtcg attacaccta cagcgcgagc taccaaatcc ccacgagcaa
     2821 aggcgacatg tggcggcgaa ccgtcgcaga caatcgtctc gcgctcagca cgaagggcga
     2881 gtcgttcaag atcctatcgg ggatgtgacg agcggctagg ccgcacctgc tcagggactg
     2941 cggaagtctt ctaagatttc ctcgatgacg aagctcggac cgctcggcgc gagccgaaag
     3001 gtgagcgtgt cgccgagcat gcgcgggcgg ccgccccagg ccacgtcgat ggggacctcc
     3061 agcatccaat cgtcctggtc tttcgaaaca cgaatgtccg cgtcccggta aatggtttcg
     3121 cccgcaagac tccggtagtc gtagcgagcg aaccggctcg accacgccga ggtcgcgccc
     3181 tcgcgccgcg tgccgttctg catcatggcg ttcggcgcga gcagcaggcc gagcgcgcgc
     3241 ggcgactcct cgacgacggc acggaagaac gcggcgacca caccatgcgc ggcgtccgga
     3301 tccggtggag tttcgagcac tacgagcccg tcgcgcgtcg tgcctgctcg tccgctggcc
     3361 ggccaagccg tcgggggctc gacgtcggtg cccgcggggt gggaagccgg cttcggcaat
     3421 gcggtcaccg attcgaaggg cggccccgcc ggggcgcagg cgccgaggag aaaccccaaa
     3481 atgagcctcg cggcgggcga gccgcgctcc gatggccggc cctcagagcg gctcgagcac
     3541 gggatcatcg gtgcggctca gagaaaccag cgagcgaccg tcgatctggc ggaagctttg
     3601 cgggacgttc gccgcctccg acacgatcag cgaaaagtgc gtgctatcga ggctcgggat
     3661 gcgggctctg cgcatcgtat cctcaccgag cagtccctcg atttcgtacc gcccgtgaag
     3721 cacgcggtac gccatgttcc cgttacggtg cacgccgacc atgcgctcgc cgttcgtgac
     3781 gaggatgtcg ccgctgttcg gtccgtgccc ttcttccgcc gacaagcgat cgacgagtgc
     3841 gatcgacgcg cgcagggcgg ccgaaatcgc ctcgtagctc gcgtggccgg actcgaggtg
     3901 ccctgcgtcg tgcaagaacg acaggaacaa atagaaaaaa agctcgctgt cggtctcccc
     3961 gcggacgttg cggcgcaaaa actcgggctg tgcctcgagc aggcgggggc gcaggcgctc
     4021 gaaacccaag atcgtcccgg tctgcgccca gagccacgag cgatagcgga acgggtgggt
     4081 gttctccgtc cggagcgcgc cgacgctcgc caggcgcacg tgcccgagca gcacgtcggc
     4141 ccgcacgtcg tcggcagctt ccgccaggtc gatgacctca cggtcgtcga gcggccggcg
     4201 acgcaggagc acctcgcccg cctggtagaa gccgatgccc cagccgagcg gttgatccgg
     4261 agcgcggcgt tccttcagga cgtctgcgct cgaagcgagc acgagcgcgc cgaggtctgc
     4321 ccgattaccg atgaagccga acatgcgcgc catggctact cttcacctcg cctgaatttc
     4381 tatcttagct gcttcgaccc gagcatgcac ttcttgccac aacgttcggg tagaggagta
     4441 tgtttcgcgt cgatgcagac gcgggtcctc tcgctttcgc tcctgattgg cacgtttgcg
     4501 tgcagcgccg tgtacccgga gctttcctcg ccgttgcgta cgccgccgcc cgattttcat
     4561 ctcgagccac cgccgccctc cgacctgttc ttttttcgct tcgcgggcgc cgacatcccg
     4621 acgaaaaccc gggacggccg ccattgggac tccgttgggg gggaagcccc ggacccctac
     4681 gcaaagctcc t
//
LOCUS       DATIML010000185         1775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3790440, whole genome shotgun sequence.
ACCESSION   DATIML010000185 DATIML010000000
VERSION     DATIML010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3790440"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..934
                     /locus_tag="VLJ38_03250"
     CDS             <1..934
                     /locus_tag="VLJ38_03250"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSU38550.1"
                     /translation="DGWLQAGQNDDYAIGYYRAADLPFFAQAAPRWTALDRYFAAIMA
                     ETYPNRIYQHAAQVDRLTNTLDISTLPTIWDRLADVGRSGRYYYSDVPFLALWGAKYL
                     PISRPVAAFVTDALTGRLPDVAFVDPPFLEESSGTSSDDHPHADIRRGEAFLDLIYSA
                     VTLGPAFRSTLLVINFDEWGGFFDHVPPPTAPIPDSDRLAGNEDGRLGFRTPAVLVAP
                     WARSNYVSHLQFDHTSVLKLIEWRWGLSPLSVRDQSARNLAEALDFTRHTRPPLFVVP
                     PSPATACALPQAIEDVSLGSLANLAPAFGFPVYR"
     gene            1021..1512
                     /locus_tag="VLJ38_03255"
     CDS             1021..1512
                     /locus_tag="VLJ38_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38551.1"
                     /translation="MPRSISNAGPYRGKGRAWWSALIVVGFVLVVALGFRYARSSGLT
                     LGSRNGSFDSSMKLVLVVLATLQSSKIVRSGRRKGLWYASFGMLPVVLFTYSRDLPSH
                     GPMALILAVVVTALWLASWLAIAWRRQRTALWCIGLCGGLAASVVVSRWTEFRAAAYG
                     LYR"
     gene            complement(1618..>1775)
                     /locus_tag="VLJ38_03260"
     CDS             complement(1618..>1775)
                     /locus_tag="VLJ38_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013349684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribosomal protein S19 family protein"
                     /protein_id="HSU38552.1"
                     /translation="NMVGHKLGEFAPTRTFHGHVGDRKGGGTPSGAPAAGGAGGAKKS
                     AAPPAKK"
BASE COUNT          266 a          632 c          549 g          328 t
ORIGIN      
        1 cgacggatgg ctccaagccg ggcagaacga tgactatgcg attggttatt accgcgccgc
       61 ggacttgccc ttttttgcac aggcggcgcc gcgttggacc gcgctcgatc gctatttcgc
      121 cgcgatcatg gcggaaacgt acccgaaccg gatttaccag cacgcggcgc aggtcgatcg
      181 gctgacgaac acactcgaca tcagcacgct gcctacgatt tgggaccgtc tcgccgacgt
      241 cggtcgcagc ggccgctact actacagcga cgtgccgttc ctcgcgctct ggggcgcgaa
      301 gtacctgccc atcagccgtc ccgtcgccgc attcgtcacc gacgcactga cgggcagact
      361 tcccgacgtc gcgttcgtcg acccgccgtt tctcgaggag tcgagcggca cctcgagcga
      421 cgatcatccg cacgccgaca ttcgtcgggg cgaagccttc ctcgatttga tttacagcgc
      481 cgtgaccctg ggccccgcgt tccggagcac gttgctcgtc atcaacttcg acgaatgggg
      541 cggctttttc gatcacgtgc cgccgcccac ggcgccgatc ccagacagcg atcgactcgc
      601 cgggaacgaa gacggtcgcc tcggcttccg cacgcccgcc gtgctcgtcg cgccctgggc
      661 tcgctcgaac tacgtctcgc acctacagtt cgatcacacc tcggtgctca agctcatcga
      721 atggcgctgg ggcctctcgc cgctcagcgt ccgcgaccag agcgcgcgca acctcgctga
      781 agcgctcgac ttcacgcgcc acactcgccc gcccctcttc gtggtgcctc cgagcccggc
      841 cacggcctgc gcgctgccgc aagccatcga ggacgtgtca ctcggctcac tcgcgaacct
      901 cgcgccggcg ttcggattcc cggtttatcg ctaaaacgcc gccccgcgaa ttcacgcaac
      961 ccagagtagc ggccgaccga acacgagggg attggaccct tttggtcctg gaggtccgcc
     1021 atgccccgat ccatttccaa tgcaggccct tatcgcggga agggccgggc gtggtggagc
     1081 gccctcatcg tcgtgggctt cgttctcgtg gtggcgctcg gcttccgtta cgcgcgctcg
     1141 tcaggcctga cgctaggttc gcgtaacggg tcgttcgact cgagcatgaa gctcgtgctc
     1201 gtcgtcttgg cgaccctgca gagcagcaaa atcgtgcgct cgggccgtcg aaagggactt
     1261 tggtacgcga gcttcggcat gcttcccgtc gtgctcttca cgtactcgcg agacctccca
     1321 tcccacggac ccatggcgct catcctcgcg gtcgtcgtga ccgcgctgtg gctcgcgagt
     1381 tggttggcaa ttgcgtggcg gcggcaacgg actgctctct ggtgcatcgg gctctgcggc
     1441 ggactcgccg cgagcgtggt cgtctcgagg tggacggagt tccgcgcggc cgcatacggc
     1501 ttgtatcgtt agcagcgtcg acgccgggag gcggcgcaca gcatgcgccg cacaaaagac
     1561 gcaaaggcag gccgcccgaa ggacgacctg ccgtgatgcg ccgttccgaa cgcggagcta
     1621 cttcttcgcc ggcggtgccg ccgacttctt cgcgccgccg gcgccgcccg ctgcgggggc
     1681 gccgctcggc gtgccgccgc ccttgcgatc gcccacatgt ccgtggaacg tccgcgtcgg
     1741 cgcgaactcc ccgagcttgt gaccgaccat gttct
//
LOCUS       DATIML010000186         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2057541, whole genome shotgun sequence.
ACCESSION   DATIML010000186 DATIML010000000
VERSION     DATIML010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2057541"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1061
                     /locus_tag="VLJ38_03265"
     CDS             <1..1061
                     /locus_tag="VLJ38_03265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38553.1"
                     /translation="VSPGEVHALNAERARSWPLGMTTTSTHDTKRGEDAAARIAVLAE
                     LPRIWASTVRRWHELTLPAATTDTAAPELTHIYGLFQAIAGGWPFGWDGHAGREEFRD
                     RVKEYALKAARETKTRTSWLNQDTDYEAAVTGFVERAFADEAFVEHAHGFCALIAPYG
                     AGNALAQCLLRLCSPGVPDTYQGSELWQQSFVDPDNRRPVDFERRQSALAALRARLND
                     RGPLARELLGRYEDGDIKLYVTHLALQARKAQPELFLRGDYTALPGGQHVVAFTRGFE
                     DARLICVVPRLVYTLTRGERPWALADAWGDASLELRHSGNYVNVFTGARLALSGTAAL
                     RDIFAEFPLALLLREDTT"
     gene            1058..>2344
                     /locus_tag="VLJ38_03270"
     CDS             1058..>2344
                     /locus_tag="VLJ38_03270"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSU38554.1"
                     /translation="MTAEIPELGARVCGNATRFGVFTDAGRALLRLYDENERPERDVP
                     FVAMGGGYFTAEVPGVGHGALYRFVLDDERALPDPYARALPRGVHGPAMVVESRHAWR
                     SPRMPRPRHAHVIYELHVGTFTPEGTYAAAATRLEHLAALGVTTLELLPLSSFAGRHG
                     WGYDGVAHFAPHAAYGTPEDLREFVDRAHEHGFSMLLDVVYNHFGPAGNYLAAYSKRY
                     FTSETPTAWGDAPDFGEPELRRYVLDNARYWLDEFRFDGLRLDATHSIYDRSPEHVLR
                     ELTHELGALTPKPWLAAEDERNAPELVREHGLDAIWADDFHHQMHVTLTGERDGYYGA
                     YTPGAADVARAIAEGWLYSGQVFPPSGKPRGASARGLPSESLVYCLQNHDQIGNRALG
                     ERLSALTSPSAYRAAYVLLLTLPMTPLLFMGDEWAAS"
BASE COUNT          348 a          846 c          792 g          358 t
ORIGIN      
        1 ccgtctcgcc cggcgaggtc cacgcgctca acgccgagcg cgcgcggagc tggccgctcg
       61 gcatgacgac gacctccacg cacgacacca agcgcggcga ggacgcggcg gcgcgcatcg
      121 ccgtgctcgc cgagctgccg cggatctggg cgagcacggt gcggcgctgg cacgagctca
      181 cgctccccgc ggccactacc gacacggccg cgcccgagct cacgcatatt tacggcctgt
      241 ttcaggcgat cgcgggtggc tggccgttcg gctgggacgg tcacgcggga cgcgaggagt
      301 tccgcgatcg cgtgaaggag tacgcgctca aggccgcgcg cgaaaccaag acgcgcacgt
      361 cgtggttgaa tcaggacacc gactacgagg ccgccgtcac ggggttcgtc gagcgcgcct
      421 ttgcggacga ggcgttcgtc gagcatgcgc acggcttttg cgcgctgatc gcgccgtacg
      481 gcgccggcaa cgcgctcgcg cagtgcttgc tcaggctttg ctcgccgggc gtgcccgaca
      541 cgtaccaggg ctccgagctc tggcagcaga gcttcgtcga tcccgacaac aggcggcccg
      601 tcgacttcga acgacggcaa agcgcgctcg ccgcgctccg cgcgcgcctg aacgatcgcg
      661 ggccgctcgc gcgcgagctc ctcggacgct acgaggacgg cgacatcaag ctatacgtca
      721 cgcacctcgc gttgcaggcg cgcaaggcgc agcctgagct cttcctgcgc ggcgactaca
      781 cggcgctgcc gggcggccag cacgtcgtcg cgttcacgcg tggcttcgaa gacgcgcggc
      841 tcatctgcgt ggtcccgagg ctcgtgtaca cactcacgcg cggcgaacgt ccgtgggcgc
      901 tcgctgacgc ttggggcgac gcctcgctcg agctccgtca cagcggcaat tacgtgaacg
      961 tcttcacggg cgcgcggctc gcgctgtccg gcacggccgc tctgcgcgac atttttgcgg
     1021 aatttccgct ggcgctgctg ctgcgggagg acacgacgtg accgccgaga tcccagagct
     1081 tggcgcgcgc gtttgcggca acgccacgcg gttcggagta ttcacggacg cggggcgcgc
     1141 gctcctgcgg ctctacgacg agaacgaacg accggaacgc gacgtgccat tcgtcgcgat
     1201 gggcggcggc tatttcacgg ccgaggtgcc cggggtcgga cacggggcgc tctatcgctt
     1261 cgtgctcgac gacgaacgcg cgctgcccga tccgtacgcc cgcgcgctgc cgcgcggcgt
     1321 gcacgggccg gccatggtcg tcgagagtcg gcacgcctgg cgctctccac gcatgccgcg
     1381 gccgcgccac gcgcacgtga tttacgagct gcacgtcggc accttcacgc ccgagggcac
     1441 ctacgccgcg gccgcgacgc gactcgaaca cctcgccgcg ctcggcgtga cgacgctcga
     1501 gctcttgccg ctctcgtcgt tcgcgggccg gcacggctgg ggctacgacg gcgtcgctca
     1561 tttcgcgccc cacgccgcct acggcacgcc cgaggacctg cgcgagttcg tcgatcgcgc
     1621 tcacgagcac ggcttttcga tgctgctcga cgtcgtctat aaccacttcg gccccgcagg
     1681 gaactacctc gccgcctaca gcaagcgcta cttcacgtcc gagacgccga ccgcgtgggg
     1741 cgacgcgccc gatttcggcg agccagagct gcgccgctac gtgctcgaca acgcgcgcta
     1801 ctggctcgac gagtttcgct tcgacggcct caggctcgac gcgacgcaca gcatctacga
     1861 tcgctccccg gagcacgtgc tgcgggagct cacgcacgag ctcggcgcgc tcacgcccaa
     1921 accctggctc gccgcggaag acgagcgcaa cgccccggag ctcgtgcgcg agcacggact
     1981 cgacgcgatt tgggccgacg actttcatca tcaaatgcac gtgacgctga cgggggagcg
     2041 cgacggctat tacggcgcct acaccccggg cgccgccgac gtagcccgcg cgatcgcgga
     2101 agggtggctc tattccggac aagtgttccc gccctcgggc aagccgcgcg gggcgtccgc
     2161 gcggggactg ccgtcggaaa gtctcgttta ctgtctgcaa aatcacgatc agatcggcaa
     2221 tcgcgcgctc ggtgagcggc tgtcggcgct cacgagcccc tccgcctatc gcgccgctta
     2281 cgtgttgctc ttgacgctgc cgatgacgcc gctcttgttc atgggcgacg agtgggcggc
     2341 gagc
//
LOCUS       DATIML010000187         1981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2346435, whole genome shotgun sequence.
ACCESSION   DATIML010000187 DATIML010000000
VERSION     DATIML010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2346435"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..>1981)
                     /locus_tag="VLJ38_03275"
     CDS             complement(156..>1981)
                     /locus_tag="VLJ38_03275"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HSU38555.1"
                     /translation="VGALSLLLVALGVAVEGVGHLSAVVMFGVAFAVAVVPESMPAMM
                     TLSLAFGVERMAKKNAVIRRLAAVEALGAVTVIASDKTGTLTCNRLVVDELDSVHDDE
                     ALLALALANDADPTQDAGDPLERALVEHATSRGADVSALRAAHPRVSSRPFDGRVRYM
                     RVTVESPAGALRSYVKGAAEVVLERSSLSEGERARWLLRAEAHAKNGFKVLGLATGAA
                     DAESGLDFLGLVTLWDAPRPEARAAVRTAQTAGIVVFMLTGDHPDTARAIGERVGIGS
                     ERTLTGVELDALDAAGLAEALASVRIFSRLLPEHKLRIVEALQARGEIVAMTGDGLND
                     APALKQADVGVAMGERGSEVAREVADVVLLDDQFSTIVAAIEEGRIIYENILNFIRFT
                     FSSNVALMLLVLGGTFGSLFLDLRNASGGLILPLTALQVLWINFLGDGPPALALAADR
                     SRGVMQRGPRRPDERLLDARTLRFILTDGGFKGVVGLGMLALLPRLGVSLAGTATAVF
                     LYESVAKLVSAYPARRVGGAAAPNRWLHYSVGAGIGLGVLGATIEPLRLTLGLAPLEA
                     RSLAPLFVAAVLTLVSGELVARALRSDARAASERWRDAPAE"
BASE COUNT          339 a          697 c          680 g          265 t
ORIGIN      
        1 tgcggaagga agtgcatggc gcatgccagt cgcctgtagg cgtggtccgc gcagcgattt
       61 cacgctagcg agtgagcgcg ctggccgctt tacgaggtag ggcgcgaaat tggtgcgcgc
      121 atcggcgtcg cgcgcgcaag ctttgcgcgt gcgagctact cggcgggagc gtcgcgccag
      181 cgctccgacg ccgcgcgcgc gtccgaacgc agggctcgcg ccacgagctc gccgctgacg
      241 agcgtcaaca cagccgcgac gaacagcgga gcgagggagc gcgcttcgag cggggcgagc
      301 ccgagcgtca gccgcagtgg ctcgatcgtc gcgccgagaa cgccgagacc gatgcccgcg
      361 ccgacggagt agtgcagcca gcgattgggc gccgcagcac cgcccacgcg ccgagcgggg
      421 taggcgctca cgagcttcgc gaccgactcg tacagaaata ccgccgtggc cgtgccggcg
      481 aggctcaccc cgagccgcgg caaaagggcg agcatgccga gcccgacgac gcccttgaag
      541 ccgccgtccg tcaagatgaa gcgcagggta cgtgcgtcga gcaaacgctc gtccggccgc
      601 cgcggtccgc gctgcatgac gccgcgactg cgatcggcgg cgagggcaag cgccggcgga
      661 ccgtcgccga ggaagttgat ccacaagact tgcagggccg tcagcggcaa aatcaggccg
      721 ccgctcgcgt tacgcaaatc gaggaagagc gaaccgaagg tgccgccgag cacgagtagc
      781 atgagcgcga cgttgctcga gaacgtgaag cggatgaagt tcagaatgtt ctcgtaaatg
      841 atgcgcccct cctcgatggc cgcgacgatc gtcgaaaact gatcgtcgag cagcacgacg
      901 tcggccactt cgcgcgcgac ttcactgccg cgctcgccca tggcgacccc cacgtcggct
      961 tgcttgagcg cgggagcgtc gttcaagccg tcgcccgtca tcgcgacgat ctcgccgcgc
     1021 gcttgcagcg cctcgacgat gcgaagcttg tgctcgggca agagccgcga aaagatgcgg
     1081 acgctcgcca gtgcctcggc aaggcccgcc gcgtcgagcg cgtcgagctc gacgcccgtg
     1141 agggtgcgct ccgagccaat gccaacgcgc tcgccgatgg cgcgcgccgt gtccgggtga
     1201 tcgcccgtca gcatgaaaac gacgatgccg gccgtttgcg cggtgcgcac cgccgcgcga
     1261 gcctcggggc gcggcgcgtc ccacagcgtc acgaggccga gaaaatcgag accggactct
     1321 gcgtccgccg cccccgttgc gagtcccagc actttgaagc cgttcttcgc gtgggcttcc
     1381 gcccgcagca gccaacgagc ccgctcgcct tcgctcaagc tcgagcgctc cagcacgacc
     1441 tcggccgcgc ctttaacgta gctacggagc gctcctgcgg gcgactcgac cgtcacgcgc
     1501 atgtagcgca cccggccgtc gaacggccga ctcgaaacgc gagggtgcgc cgctctgagc
     1561 gcgctcacgt ccgcgccacg cgacgtcgcg tgttcgacga gcgcgcgctc gagcgggtcg
     1621 ccggcgtcct gcgtggggtc ggcgtcgttg gcgagcgcga gcgcgagcag cgcctcgtcg
     1681 tcgtgcacgc tgtcgagctc gtccacgacg agacgattgc acgtgagcgt gcccgtcttg
     1741 tccgacgcga tgaccgtgac ggcgccgagc gcctccacgg ctgcaagtcg ccgaatgacc
     1801 gcgttcttct tggccatgcg ctcgactccg aacgcgagcg acaacgtcat catcgccggc
     1861 atgctctcgg gcacgacggc cacggcgaac gcgacgccga acatgaccac ggccgaaaga
     1921 tggcccacgc cctccacggc aacgccgagc gcaacgagca ggaggctcag cgcgccgacg
     1981 t
//
LOCUS       DATIML010000188         6852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_38693, whole genome shotgun sequence.
ACCESSION   DATIML010000188 DATIML010000000
VERSION     DATIML010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6852
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38693"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /locus_tag="VLJ38_03280"
     CDS             <1..728
                     /locus_tag="VLJ38_03280"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSU38556.1"
                     /translation="AARAKDRLPELARALGVSTPETQAVVDPNALPRIAEELGYPFVL
                     KGPFCDAEIVHGLEQARNAFDRFARTWGLPLLAQRFVSGEEYNVAVLGDGRGGTHGAV
                     AMRKTIVTRLGKAWGAVTVHDDAVLETAERVVRGLRWRGGCEVELLRARDGKVELIEV
                     NPRFPAWIYLTTAAGANLPLGLLRLALGREPPSFDGYRAGTFYVRHAAEAIGCMGDLE
                     SIAQRGRKRSSVLDAEAGPPNAA"
     gene            752..2113
                     /locus_tag="VLJ38_03285"
     CDS             752..2113
                     /locus_tag="VLJ38_03285"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HSU38557.1"
                     /translation="MTRSTYERPTIVKTPVGLMNKLGRRADLRAVGEIDGVPIERLCK
                     RFGSPLFVFSERRMRARMKEAKLAFGRNYPNTRFGWSYKTNYLNAICAVFHAEGSLAE
                     VVSGMEYEKARRLGIPGRDIIFNGPAKTEAELERAAREGAIIHADHSEEILLLERIAE
                     RSETPPVVGLRVSVDAGIQPRWDRFGFDLESGQALDAARRIVQGGRLKLGGLHTHIGT
                     FILEPAAYGRATAKLREFATTLRETLGVDVTHLDLGGGFASNNTLAAQYHSGALAPPI
                     AEYADAITRELRDARWPLLIETGRALIDDAGTLLTSVIATKRLSTGRRAIVIDAGVNL
                     LFTAWWYRLGVSPARAADAFVEDTTIYGPLCMNIDCVRESVPLPDLRPGEHLAIHPAG
                     AYTLTQSMQFIKLRPACVLVSETGEPELIRRAEVLDDLSGPELLPERLRVPERLRVPE
                     RMD"
     gene            2120..4297
                     /locus_tag="VLJ38_03290"
     CDS             2120..4297
                     /locus_tag="VLJ38_03290"
                     /inference="COORDINATES: protein motif:HMM:NF015226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015204 - urea transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071918 - urea transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea transporter"
                     /protein_id="HSU38558.1"
                     /translation="MASSALKTLGRATAERSRALLSAYARLVFGSGARVGFVLLLATF
                     ERPATAVLGLLAVLVSYAVATAASYAREAVTSGYYGYNALLVALALAESQQLSFKIAV
                     LVSGGAALATLLAAVLGDVLYRFGLPLLALPFVVVTSLLWHTTLSPGALPFWLEPHAP
                     ALSHASFAESVLSALGAIVFRPTLLGGMLVLVAVALHSRITAASLLAGALVAAELVRE
                     LAPHEPALVLPAAYNGALTFAALSTAFYVPSRAALWVAVASSALTAWLTAAFMLPFAP
                     LALPVLAWPFVLVTLSVMRALGLRAPGHAPFLAFLADAAPEANLEYARTFAKRLAVPG
                     PPRFVLPVRGEWRVTQGVNGAHTHRGPWRHALDFELVDPDGFPFRGNGTALEDYYCFG
                     QPVLAPGNGLVVAVHDGAGDNTPGEQDLARPWGNAIVLQHGPALFSVLAHLRRGSIAV
                     TLGQQVMAGAAIAECGASGRSPRPHLHFQAQASALLGAPTLEFRSLNYVVAGEPARFE
                     RLGVPAEGESVRAPEVEPCAFPPAEFSVIDGEQRRITLRREVTLYGEHALVNAEDDER
                     LFFVPHAGGVIFTALRGKPDGVLGALLQIAPHLPAANLPRLEFEEELAPEKLLPLPLR
                     LVYQLLAIFFEPASARVRGEVIRRGDELVVESECEVRLLGHVIRRRHGRLELDGRGLA
                     NIELSAATFGAAPCVQASRPSVPSDDARTLRADYGAPACVVFR"
     gene            4279..4932
                     /locus_tag="VLJ38_03295"
     CDS             4279..4932
                     /locus_tag="VLJ38_03295"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38559.1"
                     /translation="MRRISLTKHALALGAFLACSTLGVRCDVVPAAAADDDGNALGQS
                     FALEARGDLTGALAASERAVRAQPELYFAALRVAYLELQLKNYAAAARDYAHAGQLAP
                     RSIEALLGRQQALLALERYTEAEPVGRAVLASDADNYLGTSRLAFTLFNLKHYDTAAA
                     LYARLLVLYPSDLEMMTGLGYAELRAGRKREARDTFRALLAISPDHPRARAGLAACR"
     gene            complement(4991..6424)
                     /locus_tag="VLJ38_03300"
     CDS             complement(4991..6424)
                     /locus_tag="VLJ38_03300"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HSU38560.1"
                     /translation="MSEEQSPSPPPNHDFTTTHAGVEAVSFTRREVLQGSLVGAVAAS
                     TLATKAAAATPEPVAKSSLSHYHVAATNKTVHWGYFSKKLAPVVTVNSGDFVTIETVT
                     HHSYDDFERMIQGDPGVESIFYWDAKRKGVDRRGAGPMDASLFGRGAGEGMGVHVCTG
                     PVAVKGAEPGDILEVRILDVKPRPCANPTYKGKSFGSNAAAWWGFHYKDLLEEPKPRE
                     VITIYEVDATGERDFAKAVYNFRWIPQTDPYGKVHKIIDYPGVPVNHAFTKRNFGILK
                     HVRVPIRPHFGTMGLAPAEADMVDSIPPNYVGGNIDDYRIGKGATMYYPVSVPGGLFS
                     VGDPHASQGDSELCGTAIECSLTGTFQLVLHKKNTLTSTPLEALNFPLLETPTEFVVH
                     GFSFANYLAELGPKAQSEIYSKSSTDLALRDAFRKMRHFLMTTQKLTEDEAISLMSVA
                     VDFGVTQVVDGNWGIHAIVKKSIFSGA"
BASE COUNT          999 a         2462 c         2213 g         1178 t
ORIGIN      
        1 tcgcagcgcg cgcgaaagat cgcctgcccg agcttgcgcg tgcgctcggc gtgagcacgc
       61 ccgagacgca ggccgtcgtc gacccgaacg cgctcccgcg catcgccgaa gagctcggct
      121 atcccttcgt gctcaagggg ccgttctgcg acgcagaaat cgtgcacggt ctcgaacaag
      181 cacggaatgc cttcgaccgc ttcgcgagga cgtggggttt gccgctgctc gcccagcgct
      241 tcgtgagcgg tgaagagtac aatgtcgccg tgctgggcga cgggcgcggc ggcacccacg
      301 gcgccgtcgc gatgcgcaag acaatcgtga ctcggctcgg caaagcctgg ggcgcggtga
      361 ccgtgcacga cgacgcggtg ctcgagaccg ccgagcgcgt cgtgcgcgga cttcgctggc
      421 gcggcggttg cgaagtcgag ctcctccgcg cgcgcgacgg caaggtcgag ctcatcgagg
      481 tgaacccgcg ctttcctgcc tggatttacc tgacgacggc cgcgggtgcg aacctgccgc
      541 tcggtctttt gcgcctggcg ctcggacgcg agccgccgag tttcgatggc tatcgcgcgg
      601 gcacgttcta cgtgcgacat gccgccgaag ccatcggttg catgggtgat ctcgagagca
      661 tcgcgcagcg cggccgcaag cgcagctcgg tgctcgacgc cgaagccggt cctccgaacg
      721 cagcttgagt acgggtcgaa gagacacgaa cgtgacgaga tccacctacg agcgcccgac
      781 catcgtgaag acgccggtcg ggctcatgaa caagctcggc cgccgcgccg atctgcgagc
      841 ggtcggtgaa atcgacggcg tacccatcga acgcctatgc aagcgcttcg gctcgccgct
      901 gttcgtgttt tccgagcgcc gcatgcgcgc ccgcatgaag gaagccaagc tcgccttcgg
      961 ccgcaattat ccgaacacgc gcttcggctg gtcgtacaag acgaactatc tgaacgcgat
     1021 ttgcgccgtg ttccacgccg aaggcagcct cgcggaagtc gtctccggca tggagtacga
     1081 gaaagcgcgc cggctcggga tccccggccg cgacatcatc ttcaacggcc cggcaaagac
     1141 cgaagccgag ctcgagcgcg ccgctcgcga aggcgccatc atccacgccg accattcgga
     1201 ggagatcctc ctgctcgagc gcatcgccga gcgcagcgag acgccgcccg tggtcggtct
     1261 gcgcgtcagc gtcgatgccg gcattcaacc gcgctgggac cgcttcggct tcgatctcga
     1321 gagcggccag gcgctcgacg ccgcgcgacg catcgtccaa ggcggccggc tgaagctcgg
     1381 cggtttgcac acgcacatcg gtacgttcat tctcgagccc gcggcttacg ggcgcgcgac
     1441 ggccaagctc cgggagtttg cgaccacgct gcgcgagacg ctcggcgtcg acgtgacgca
     1501 cctcgacctc ggcggcggct tcgcgtcgaa caacacgctc gccgcgcaat atcactccgg
     1561 cgcgctcgcg ccccccatcg cggagtacgc cgacgccatc acccgtgagc tccgcgacgc
     1621 gcgctggccg ctcctgatcg agacggggcg cgcgctcatc gacgacgccg gcaccctcct
     1681 cacctccgtc atcgccacca aacgcctgtc gaccgggcgc cgcgccatcg tcatcgatgc
     1741 gggcgtcaac ctcttgttta cggcttggtg gtatcggctc ggtgtatctc ctgcgcgcgc
     1801 ggccgatgcc ttcgtcgagg acaccacgat ttacggaccg ctgtgcatga acatcgactg
     1861 cgtgcgcgag agcgtgccgc tccccgattt gcggcccggc gagcacctcg cgatccaccc
     1921 ggcgggcgcc tacacgctca cccaatccat gcagttcatc aagctgcgcc ccgcgtgcgt
     1981 gctcgtgagc gagacgggtg agcccgagct gattcggcgc gccgaagtcc tcgacgatct
     2041 cagcggcccc gagctcttgc ccgaacgcct gcgcgtgccc gagcggctgc gcgtgcccga
     2101 gcggatggac tagctcccca tggcaagctc ggcgctgaag accctcggca gggccacagc
     2161 cgagcggagc cgcgcgctgc tctcggcgta cgcacggctc gtgttcggca gcggcgcgcg
     2221 cgtggggttc gtgctgctgc tcgcgacgtt cgagcgcccg gcgacggcgg tgctcgggct
     2281 gctcgccgtg ctggtgtcgt acgccgtcgc cacggccgcg agctacgcgc gtgaagccgt
     2341 gacgagcgga tactacggct acaacgccct cttggtcgcg ttggcactcg cggagtcaca
     2401 gcagttgagc ttcaaaatag ccgtgctcgt gagcggtggt gcggctctcg cgacgctcct
     2461 cgccgccgtg ctcggagacg tactctaccg cttcggactg cccctcctcg cgctgccttt
     2521 cgtcgtcgtg acgagtctgc tctggcacac gacgctctcg ccgggtgcgt tgccgttttg
     2581 gctcgagccg cacgcacccg ccctgtcgca cgcgtccttc gccgagagcg tgctctccgc
     2641 gctcggcgcc atcgttttcc ggccgacctt gctcggaggc atgctcgtgc tcgtcgccgt
     2701 ggcgctccat tcgcgcatca cggcggcttc gctcctggcc ggtgcgctcg tcgccgccga
     2761 gctcgtgcgg gagctcgcgc cgcacgagcc tgcgctcgtc ttacccgcag cgtacaacgg
     2821 tgcgctcacg ttcgcggcgc tcagcacggc cttctatgtc ccgagccgcg cggcgctgtg
     2881 ggtggccgtc gcgtcgtcgg cgctgacggc gtggctgacg gcggcgttca tgctgccctt
     2941 cgcgccgctc gccctgcccg tcttggcgtg gcccttcgtg ctcgtcacgc tttcggtgat
     3001 gcgcgcgctc ggactgcgcg cgccggggca cgcgccgttt ctcgcgtttt tggccgacgc
     3061 cgcgccggag gcaaacctcg agtacgcgcg cacgttcgcc aaacgcctcg ccgtccccgg
     3121 tccgccgcgc ttcgtgctgc ccgttcgcgg cgagtggcgc gtgacgcagg gcgtgaacgg
     3181 agcgcacacg catcggggcc cctggcgaca cgcactcgat ttcgaactcg tcgaccctga
     3241 cggcttccca tttcgcggca acggcaccgc gctcgaggat tactactgct tcgggcagcc
     3301 ggtgctcgcg ccgggtaacg ggctcgtcgt ggcggtgcat gacggagcgg gtgacaacac
     3361 gcccggcgag caggatctcg cgcgcccgtg gggcaacgcg atcgtgctcc agcacggccc
     3421 agcgctgttt tcggtgctgg cccacctgcg ccgcggttcc atcgctgtca cgctcgggca
     3481 gcaggtcatg gcgggcgcgg cgatcgcgga gtgcggcgcc tcggggcggt ccccgcggcc
     3541 acacttgcat ttccaggcgc aggcgagcgc gctgctcggt gcaccgacgc tcgagtttcg
     3601 cagcttgaac tacgtcgtcg cgggcgagcc ggcgcgcttc gaacgactcg gcgtgcccgc
     3661 cgaaggcgag agcgtgcgcg cgcccgaggt cgagccttgc gcgtttccgc ccgccgagtt
     3721 cagcgtcatc gacggcgagc aacggcgcat cacgctgcgt cgcgaggtca cgctgtacgg
     3781 cgagcacgcg ctcgtgaacg ccgaggacga cgagcgtctc ttcttcgtgc cccacgcggg
     3841 cggcgtgatc ttcaccgccc tccgcggcaa gcccgacggc gtgctcgggg cgctcttgca
     3901 aatcgcgccc cacttaccgg ccgcgaacct gccgcggctc gagttcgagg aagagcttgc
     3961 gcccgagaag ctcctgccgt tgccgctcag gctcgtctac cagctgctcg ccatcttttt
     4021 cgagccggct tcggctcgtg tgcgcggtga ggtcatccgc cgcggcgacg agctcgtcgt
     4081 cgagagcgaa tgcgaggtgc gtcttctggg acacgtgatc cgacgccgcc atggccggct
     4141 cgagctcgac gggcgcggcc tcgcgaacat cgagctctcg gcggcgacct tcggagcagc
     4201 gccctgcgtc caggcgtctc gcccctccgt gccgagcgac gacgctcgaa ccctccgggc
     4261 cgactacgga gcacctgcat gcgtcgtatt tcgttgacca agcacgccct ggcgcttggg
     4321 gccttcctcg cctgttcgac gctcggcgtc cgctgcgacg tggtgccggc cgccgcagcc
     4381 gacgacgacg gcaatgcgct cggccagagc ttcgcgctcg aagcacgcgg ggacctcacg
     4441 ggcgctctag ccgccagcga gcgcgccgtt cgcgcgcagc ccgagctcta ctttgctgct
     4501 ttgcgcgtcg cctacctcga gcttcaactc aaaaactacg cggctgcggc ccgagactac
     4561 gcgcacgccg gccaactcgc accgcgctcc atcgaagcgc tgctcggccg ccaacaagcg
     4621 ctgctggcgc tcgagcgcta cacggaggcc gagcccgtcg ggcgcgccgt cctcgcgagc
     4681 gacgccgaca attacctcgg cacctcgcgc ctcgccttca cgcttttcaa cctgaagcac
     4741 tacgacacgg cagccgcact gtatgcgcgc ctgctcgtgc tctacccgag cgacctcgaa
     4801 atgatgaccg gactcggcta cgccgagctc cgcgctggcc gcaagcgtga agcccgcgac
     4861 acctttcgcg cgctcctcgc catctcaccc gatcatccgc gtgctcgcgc cggcctcgcc
     4921 gcttgtcgtt gagcggcgcg cagcgctcac tcacacgccg ttccggagcg ctctcgttcg
     4981 ctgcgggcgt ctaagcgccg ctgaaaatac tcttcttcac gatcgcgtgg atgccccagt
     5041 tgccgtccac gacttgagtc acgccgaagt cgacggcgac cgacataagc gagatggctt
     5101 cgtcttccgt gagtttctgc gtcgtcatga gaaagtgccg catcttgcgg aaggcgtcgc
     5161 ggagcgccag atcggtggag gacttcgagt agatctccga ctgtgctttc ggtccgagct
     5221 cggcgaggta gttcgcgaag ctgaagccgt gcacgacgaa ctccgtcggc gtctcgagca
     5281 gcggaaagtt gagcgcctcg agcggcgtgc tcgtcagcgt attctttttg tgcagcacga
     5341 gctggaacgt ccccgtgagt gagcactcga tcgcggtgcc gcagagctcc gaatcaccct
     5401 gggacgcgtg cggatcgccg accgagaaga ggccgcccgg caccgacacc gggtaataca
     5461 tggtcgcgcc cttgccgatg cgataatcgt cgatgttgcc gcccacgtag ttcggcggaa
     5521 tcgaatcgac catgtcggct tcggccggcg caagtcccat cgtgccaaag tgagggcgaa
     5581 tcggcacccg cacgtgcttg agaatcccga agttacgctt cgtgaaggcg tgattcacgg
     5641 ggacgcccgg ataatcgatg atcttgtgaa ccttgccgta cggatccgtc tgcgggatcc
     5701 agcgaaagtt atagaccgcc ttggcaaagt cgcgctcgcc cgtcgcatcg acttcgtaaa
     5761 tcgtgatgac ctcgcgtggc ttcggctctt cgagcaagtc tttgtagtgg aagccccacc
     5821 acgctgcggc gttgctcccg aacgacttgc ctttgtacgt gggattcgcg cagggacgcg
     5881 gcttcacgtc gagaatgcgc acctccaaaa tatcgcccgg ctcggcacct ttcacggcca
     5941 cgggtcccgt gcacacgtgc acgcccatgc cttcgccggc gccgcgaccg aacagcgacg
     6001 cgtccatcgg ccccgcgccg cggcgatcga cgccctttcg cttggcgtcc caataaaaaa
     6061 tgctctcgac gcccggatcc ccctggatca tccgctcgaa gtcatcgtac gagtggtgcg
     6121 tgacggtctc gatcgtcacg aagtcgcccg agttgacggt gacgaccggc gcgagtttct
     6181 tgctgaaata gccccagtgt accgtcttgt tcgtcgccgc cacgtgatag tggctcaggc
     6241 tgctcttcgc tacgggctcg ggcgtggccg cggccgcttt cgtggccagc gtgctcgccg
     6301 cgacggcacc gacgagtgaa ccctgcaaaa cctctcggcg cgtgaagctc accgcctcga
     6361 cgcctgcatg cgtcgtcgta aagtcgtggt tcggcggggg tgacggcgac tgttcttctg
     6421 acatccacga gcgtatgcag cgcgtcgagt ttcggcgtta cttcccgcgc gttccgttac
     6481 ctgctcgctc tacgctgcgt cccgtcgtcg cgagcgtcga cgcaacccga gcccgagtag
     6541 caacaggagc gccatcggtg gcgcggggct agcaccggag ctcgcacggc acccgcagcc
     6601 cgtcgggcta tccgtcccgc cgggcccgtc gctggggccc gcgcccgaag cgccatttcc
     6661 cgcgtttgag ccaccgcggc cggcagttgc cccgccgctg cctccgactg ccccgccggt
     6721 cccggccgcc actgctccgc cctggccggg ggccgtgccg cccgtgccgc cacgcagatc
     6781 ccctccagca cctatgccac tgctattggc accggcgtcg ccaccgttcg cacccgacct
     6841 acccgcggag cc
//
LOCUS       DATIML010000189         3953 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1193903, whole genome shotgun sequence.
ACCESSION   DATIML010000189 DATIML010000000
VERSION     DATIML010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3953
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1193903"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VLJ38_03305"
     CDS             complement(<1..425)
                     /locus_tag="VLJ38_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HSU38561.1"
                     /translation="MSTAKSPNSTRAVHAGGPAVRTNHTLAASIAQTATYTFDNTADL
                     EQYMRGEDPDPEREEYGRYGNPTVRELEQRVTALESAEDGVAFSSGMAAISTAVLSLV
                     KAGEHVVLFNDCYRRTRQLVRSVLSRFGIEHDVVPAGDL"
     gene            complement(422..2146)
                     /locus_tag="VLJ38_03310"
     CDS             complement(422..2146)
                     /locus_tag="VLJ38_03310"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF006625.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HSU38562.1"
                     /translation="MRYRNSLLPTLKEAPADATSVSHVLLLRGGFIRRMGAGIYSFLP
                     LGVRVLRNVERIIREEMNRSGAEEVLLPALLPAEYFQESGRWDVFGDTLFRLKDRKRG
                     DYHLGPTHEEIITDLIRREVKSYRDLPKTLYQIQTKFRDEPRPRGGLLRCREFIMKDA
                     YSFHVSEEDARKGYEAMRLAYRRSFDRMGLDYRMVQADSGAMGGSGSAEFQVLVQSGE
                     DQLVACTSCDYAANLEVAKSRTLPPVGADGDVPSLERVHTPGVGSIDAVAKFLKLPAE
                     RFLKSLIYLAGGELVLAVVRGDHEVHEVKLARALRVDEVHLASPADVAKATGAAVGFA
                     GPVGFKGKVIVDRDAAQVRDAVTGANETDYHLVHVHVGRDFQPDVAEIRSVLAGDQCP
                     VCGAALESYRGIEAGHIFLLGTRYTAQMGGKYLDEAGKEQTIVAGSYGIGVSRLVATV
                     IEQHHDQNGIRWPLSIAPYQVQIVQLGDSAEVRAAVNEIESGLERAGIEVLVDDREER
                     PGVKFKDADLVGVPLRVTVGEKALKTGQVELKPRSEPDPKKAELVALGAIVPTLVQRV
                     REGLGGAA"
     gene            2428..>3953
                     /locus_tag="VLJ38_03315"
     CDS             2428..>3953
                     /locus_tag="VLJ38_03315"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HSU38563.1"
                     /translation="MTAQATWKERLNGKIREDWAREIDIFETQIELRKKKKIEEKLFA
                     ETRLRRGCYGQRYDNGQRHDGEKTQALVYPAGDLTKGPNTYWDAPGMMRIKIPFGRMS
                     PEQMDVLCELAEETSDQILHVTTRQDIQLHFIHIEDTPDLMRRLAAVGITTREACGNA
                     VRNVTACPISGVCNTEAFDVTPYANAIMFFLLGHDDTLDFGRKFKIAFSGCGDNPCGL
                     TNFHDMGAIAKTRVVNGETKRGFAYYVGGGLGAVPYPAALFDEFVSEEELFPLTQAVC
                     RVFGRLGEKENRSRARIKFLVKKLGIDEFRRIVLEEREKLRPDPRWTAFLATLRETDG
                     VPLKPGAPLADGPRPAGFDAWYKTNVQQQRQPGYAVATVTLPLGDFTPDQGRALGDIA
                     RRYSTDALRTTVAQNLLYRWIPEAELPKLYEELKALGLAEAGAETITDITSCPGTDTC
                     KLGISSSRGLAGELRKRLSLVEDKLDPAAKNLHIKCSGCFNSCGQHHVADLGFLGVSR
                     "
BASE COUNT          661 a         1302 c         1321 g          669 t
ORIGIN      
        1 ctcaaatccc cggcgggcac gacgtcgtgc tcgatgccga agcgcgagag cacgctgcgc
       61 acgagttgtc gcgtgcgccg gtagcagtcg ttgaagagca cgacgtgctc gcccgccttc
      121 acgagcgaga gcaccgccgt cgaaatcgcg gccatgccgc tcgagaacgc gacgccgtcc
      181 tcggcgctct cgagcgccgt gacgcgttgc tcgagctcgc gcacggtggg attgccgtaa
      241 cggccgtact cttcgcgttc gggatccgga tcctcgccgc gcatgtattg ctcgaggtcc
      301 gccgtgttgt cgaacgtgta cgtcgccgtc tgcgcgatgc tcgccgcgag cgtgtggttc
      361 gtgcgcacgg cggggccgcc cgcgtgcacg gcgcgcgtcg agttggggga cttcgcggtg
      421 ctcacgcggc acctccgagc ccttcgcgca cgcgctgcac gagcgtcggg acgatcgcgc
      481 cgagcgccac gagctccgcc ttcttcggat cgggctcgct gcgcggcttg agctcgacct
      541 gtcccgtttt cagcgccttc tcgcccaccg tcacgcgcag cggcacgccc accaaatccg
      601 cgtccttgaa tttcacgccc ggtcgctctt cgcgatcgtc cacgagcact tcgatgccgg
      661 cgcgctcgag gccgctctcg atctcgttca cggcggcgcg cacctcggcc gagtcgccga
      721 gctgcacgat ttgcacttga tagggcgcga tcgacagcgg ccagcggata ccgttctggt
      781 cgtgatgttg ctcgatcacc gtagcgacca agcgtgacac cccgatgccg taagagccgg
      841 cgacgatggt ctgctccttg cccgcttcgt cgaggtactt gccgcccatt tgcgccgtgt
      901 agcgcgtgcc gagcaggaag atgtgcccgg cttcgatgcc gcggtacgac tcgagcgccg
      961 cgccgcagac ggggcactga tcgcccgcga gcacgctgcg gatctcggcc acgtcgggct
     1021 ggaagtcgcg cccgacgtgc acgtgcacga gatggtagtc ggtctcgttc gcgcccgtca
     1081 cggcgtcgcg cacctgcgcg gcgtcgcgat cgacgatgac tttgcccttg aagccgaccg
     1141 gtcccgcgaa gccgacggcg gcgcccgtcg cctttgcgac gtccgccggg gaggcgaggt
     1201 gcacctcgtc gacgcgcagg gcgcgcgcga gcttcacctc gtgcacttcg tgatcgccgc
     1261 gcacgaccgc gagcacgagc tcgccgcccg cgaggtagat caggctcttc agaaagcgct
     1321 cggccggaag cttcaagaac ttcgccacgg cgtcgatgct gccgacgccg ggcgtgtgca
     1381 cgcgctcgag gctcggcacg tcgccgtcgg cgccgaccgg cgggagcgtg cgcgatttgg
     1441 cgacttccag gtttgcggcg tagtcgcagc tcgtgcacgc gacgagctga tcctcgccgc
     1501 tctgcacgag cacctggaac tcggcgctgc ccgagccgcc catggcgccc gaatcggcct
     1561 gcaccatgcg gtaatcgagg cccatgcgat cgaagctccg ccggtaggcg aggcgcatcg
     1621 cttcgtagcc cttgcgcgcg tcctcttccg agacgtggaa ggagtacgcg tccttcatga
     1681 tgaactcacg gcagcgcaag aggccgccgc gcggacgcgg ctcgtcacgg aatttggttt
     1741 ggatttggta gagcgtcttc ggcaggtcgc ggtagctctt cacttcgcgc cggatgagat
     1801 cggtgatgat ctcttcgtgc gtggggccga ggtgatagtc gccgcgcttg cgatctttca
     1861 gtcggaacag cgtgtcgccg aagacgtccc agcgtccgct ctcctggaag tactcggcgg
     1921 gcaagagcgc gggcaagagc acctcttcgg cgccggaacg attcatctct tcacggatga
     1981 tccgttcgac gttgcgcagc acgcgcacgc cgagcggcaa gaagctgtag atgcccgccc
     2041 ccatgcgacg aatgaagccg ccgcgcaaaa gcaggacgtg gctcacgctc gtggcgtcgg
     2101 cgggagcttc tttcaacgtg gggaggagcg aatttcggta gcgcatgacg gcaaaggggg
     2161 tcgcaacgta gcgcagcgcg gggcctcgaa acgtgactca tcttgcggcg gcggcgggcg
     2221 gcgaggcccg gcgcggtcac cgaatgggtc agtttcgcct gcggaactag gtccgggccg
     2281 cgcgcttccg tgcccaaatc catcaaaaat ggtcaatagt tttgtttatt tgggtgattc
     2341 gcggccattc ccgactagtc acaccggaaa agtcaggtac atctcctgcc acgggtcggg
     2401 ctagtttgcc cgccggaaac gaccttcatg acggctcaag cgacttggaa agaacggctg
     2461 aacggcaaga tccgcgaaga ctgggcgcgc gagatcgaca tcttcgagac ccagatcgag
     2521 cttcgcaaga agaagaagat cgaagagaag ctctttgccg agacgcgcct gcgtcgcggt
     2581 tgctacgggc agcgttacga caacggccag cgccacgacg gtgaaaagac gcaagcgctc
     2641 gtctatcccg cgggcgatct gacgaagggg ccgaacacgt actgggacgc gcccggcatg
     2701 atgcgcatca agatcccgtt cgggcgcatg tcgcccgagc agatggatgt gctctgcgag
     2761 ctcgcggaag agacgtccga tcagatcctg cacgtgacga cgcgccagga cattcagctt
     2821 cacttcatcc acatcgagga cacgccggac ttgatgcggc gcctcgcggc agtgggcatc
     2881 acgacgcgcg aagcgtgcgg caacgccgtg cgcaacgtca cggcctgccc gatctcgggc
     2941 gtgtgcaaca ccgaagcgtt cgacgtgacg ccgtacgcga acgcgattat gttcttcttg
     3001 ctcggccacg acgacacgct cgatttcggc cgcaaattca agattgcgtt ctcgggctgc
     3061 ggcgacaatc cgtgcggcct cacgaacttt cacgacatgg gcgcgatcgc caagacgcga
     3121 gtcgtgaacg gcgagacgaa gcgcggcttc gcgtattacg tgggcggcgg cctgggcgcc
     3181 gtgccgtacc cggcggcgct cttcgacgag ttcgtctcgg aagaggagct ctttccgctc
     3241 acgcaggccg tctgccgcgt gttcggccgg ctcggcgaga aagagaaccg gagccgtgcg
     3301 cgcatcaaat tcttggtgaa gaagctcggt atcgacgagt ttcggcgcat cgtgctcgag
     3361 gagcgcgaga agctgcggcc cgatccgcgc tggacggcgt tcctcgccac gctgcgagag
     3421 acggacggcg tgccgctcaa gccgggcgcg ccgctcgccg acggtccgcg gcccgcgggc
     3481 ttcgacgctt ggtacaagac gaacgtgcag cagcagcggc agccgggcta cgccgtggcg
     3541 accgtgacgc tgccgctcgg cgatttcacg ccggaccagg gccgcgcgct cggcgacatc
     3601 gcgcgccgct actcgacgga cgcgctgcgc acgacggtgg cgcaaaacct gctctatcgc
     3661 tggatccccg aagccgagct gccgaagctc tacgaggagc tcaaggcgct cgggctcgcc
     3721 gaggcgggcg ccgagacgat caccgacatc acgtcttgcc ccggcaccga cacgtgcaag
     3781 ctcggtattt cgagctcgcg cggtctcgcg ggcgagctca ggaagcggct ttcgctcgtc
     3841 gaggacaagc tcgatccggc cgcgaagaac ctgcacatca agtgcagcgg gtgcttcaac
     3901 tcttgcgggc agcatcacgt ggcagacctc gggtttttgg gtgtgagccg caa
//
LOCUS       DATIML010000190         2256 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4369104, whole genome shotgun sequence.
ACCESSION   DATIML010000190 DATIML010000000
VERSION     DATIML010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4369104"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /gene="mltG"
                     /locus_tag="VLJ38_03320"
     CDS             <1..500
                     /gene="mltG"
                     /locus_tag="VLJ38_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HSU38564.1"
                     /translation="RKRLARLEARLPGAFDALAKSDGFDEHDVVTLASIVEREAADPA
                     EHPLIASVFYNRLHDPSFRPLRTLESDPTAAYGCLVEPAVAPSCAGFAGQVTPALLRD
                     ARNRYNTYRHPALPPGPISNPGESALSATLTPATSDYLYFVASGHGHHTFSRTFEEHK
                     RLMGH"
     gene            668..>2256
                     /locus_tag="VLJ38_03325"
     CDS             668..>2256
                     /locus_tag="VLJ38_03325"
                     /EC_number="2.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016744 - transketolase or transaldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HSU38565.1"
                     /translation="MNEFEKAVHTIQFLAADAVEKANSGHPGTPMALAGITVDIYTRY
                     LRYDPRAPEWPNRDRFVLSCGHASMLLYSVLHLAGYDLPLSELEAFRQWGSKTPGHPE
                     HGLTPGVETTTGPLGQGVGNAVGMAIASKLAAARVNQPGSEIFNYRVFCLASDGDMME
                     GVSGEASSIAGHLQLDNLVLIYDDNKITIDGKTELSFSEDVGKRYEAYGWFVQRVNGH
                     NPEEVRRALDAAVAHQGQPSLIVAHTIIGIGAPNKAGTSKAHGAPLGQAEIDAAKKAA
                     GWPLERFYVAPEAKALFARRAEENRGVRETWERSVAGLTGERAAMYKSLTTRAVPSDL
                     LEQLVAVAGTLKADATRSTGAAIEQKAAALVPALVGGAADLAESTKTTIKGAADIKHG
                     EFGGRNFNFGIREHGMAAVMNGLAVSGLFIPFGSSFLQFTDYCRPSIRLAALMEQQVV
                     YVFTHDSIFLGEDGPTHQPIEHLWSLRMIPHLDVVRPADPLECAAAWAHALERRHGPS
                     LLVLSRQKTPILERPAGFEPRR"
BASE COUNT          386 a          823 c          708 g          339 t
ORIGIN      
        1 cgcgaaaacg cctcgcgcgg ctcgaagcgc gactccccgg cgctttcgac gccctggcga
       61 agagcgacgg cttcgacgag cacgacgtgg tcacgctcgc ctccatcgtc gaacgcgaag
      121 ctgccgaccc ggccgaacac ccgctcatcg cgagcgtttt ctataaccgc ctgcacgacc
      181 ctagttttcg gccgctccgg acgctcgagt ccgatccgac agccgcgtac ggctgcctcg
      241 tcgagccggc ggtcgcgccg agttgcgccg gcttcgccgg acaagtgacg ccggcgctcc
      301 tgcgcgacgc gaggaaccgc tacaacacct accgtcaccc cgcgctgccg cccggcccca
      361 tctcgaaccc cggcgaaagc gcactcagcg ccacgctgac gcccgccacg agcgactacc
      421 tgtacttcgt cgcgagcggc cacggtcatc acacgttcag caggacgttc gaggaacaca
      481 agcgcctgat gggccactag cgcccggctc gagttgagcg gtcttgcgaa ctcagccacg
      541 gggcgcggag ttcgcgttag tcggcgttcg tggcgacaaa aaacggaacg ttcctcgacg
      601 tgagccgctc gccctagcgt ccacgctcgc tcgcgagtag gttcgcgcca ggaagtcgga
      661 gacgggcatg aacgagttcg agaaagcggt ccacaccatc cagtttttgg cggcagatgc
      721 cgtcgagaag gccaactcgg gtcaccccgg cacgcccatg gcgctcgccg ggatcacggt
      781 cgatatctac acgcgctacc tgcgctacga ccctcgcgcc cccgagtggc cgaaccgcga
      841 tcgcttcgtg ctgtcgtgcg gccacgcctc gatgctgctc tattcggtgc tgcacctcgc
      901 cggctacgat ctgccgctct cggagctcga ggcgttccgt caatggggct cgaagacgcc
      961 gggccatccc gagcatggac tcacgccggg cgtcgagacc acgacgggcc cgctcggcca
     1021 aggcgtcggc aacgcggtcg gtatggccat cgcgtccaag ctcgccgccg cgcgcgtcaa
     1081 tcagccgggc tcggaaatct tcaattaccg cgtgttctgt ctcgcctccg acggcgacat
     1141 gatggaaggc gtgtccggcg aagcgtcgag catcgcgggc cacctccagc tcgacaacct
     1201 cgtcctcatc tacgacgaca acaagatcac gatcgacggc aagaccgagc tctcgttcag
     1261 cgaagacgtc ggcaagcgct acgaggcgta cggctggttc gtgcagcgcg tgaacggcca
     1321 caaccccgaa gaagtgcggc gcgcgctcga tgccgccgtc gcgcaccaag ggcagccctc
     1381 gctcatcgtc gcgcacacga tcatcggcat cggcgcgccc aacaaggccg gcacctcgaa
     1441 ggcgcatggc gccccgctcg gccaagccga aatcgacgct gccaagaaag ccgcaggctg
     1501 gccgctcgag cgcttctacg tcgcccccga ggccaaagcc ctgtttgcgc gccgcgcgga
     1561 ggagaaccgc ggcgtgcggg aaacgtggga gcgcagcgtg gcgggcctca cgggtgaacg
     1621 cgccgcgatg tacaagagcc tgacgacgcg cgcggtgccg agcgatctgc tcgagcagct
     1681 cgtcgccgtc gccggcactc tcaaagccga tgcgacccgc agcaccggag ccgccatcga
     1741 acagaaggcg gcggcgctcg ttcccgcgct ggtcggcggc gcggccgatc tcgccgagtc
     1801 gacgaagacg accattaaag gtgcggccga catcaagcac ggtgagttcg gcgggcgcaa
     1861 cttcaacttc ggcatccgcg agcacggcat ggccgccgtc atgaacggcc tggcggtctc
     1921 cggcctcttc attccgttcg gatcgagctt cctccagttc accgattact gccgcccttc
     1981 gattcgcctc gccgccttga tggagcagca ggtcgtctac gtcttcacgc acgactcgat
     2041 tttcctcggc gaggacgggc cgacgcacca gccgatcgaa cacctctggt ccctgcgcat
     2101 gatcccgcac ctcgacgtcg tgcgccccgc cgatccgctc gagtgtgcgg cggcgtgggc
     2161 acacgcgctc gagcgccgcc acggtccgtc gctgctcgtg ctctcgcgcc agaagacgcc
     2221 gatcctcgag cgccccgcgg ggttcgagcc gcggcg
//
LOCUS       DATIML010000191         5778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3792870, whole genome shotgun sequence.
ACCESSION   DATIML010000191 DATIML010000000
VERSION     DATIML010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5778
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3792870"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VLJ38_03330"
     CDS             <1..277
                     /locus_tag="VLJ38_03330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38566.1"
                     /translation="LGTLMSSLSKSQLIALLLAIFAEFGLFVLGVGEYVFEPGLMRDL
                     CAHVSMASQMEEMSRGIVDLRRVVFDGSLAAASLFVTGRVVDSWRWG"
     gene            274..1836
                     /locus_tag="VLJ38_03335"
     CDS             274..1836
                     /locus_tag="VLJ38_03335"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GldG family protein"
                     /protein_id="HSU38567.1"
                     /translation="MSSAAPSPPAAGVRPQHTRSSKLFSALGVLAAVVIAVNANVLTA
                     RFYKRWDVSSGGLYTLSPATVTILRELRDPVTLTILLARTDPLLPPLRQLLVSYGAES
                     SKLEVKYLDPEQNPAQFAAVQQKYGISAGKAEDGRIVTDAVILVARGDRSWFVTSDQL
                     GQTDDDGRAKPRLEQALTEGIAGVLGNEKAKLCFATGRGEASLDDVAPDGLAELRRRL
                     EKNNFETEPLDLTRPDAQKLLESCRLLAIVAPEQPYGADATERVKRYVTSGGSLVAFV
                     GPTFGDDARVASSGLEPLFELGGARLERNVVLETEPSRRLPRGAGEVFFATPVEHAAT
                     RGLVLEGGKAELSPLVSESRSLTLQSGGPARPLLKSSPEALAIDDVKAVLDGKGPPPD
                     APHAERIVAAAAELPKPKDSPAKHGPRLVLAGFTNLARSRSFQDSALVGDRLLVENSI
                     AWAAARPPIVSVPEKPARALGLALTEESLGEVLRYVLMYMPGSALVIGAFVLLRRRAQ
                     ERASRKAAPRTS"
     gene            1833..3974
                     /locus_tag="VLJ38_03340"
     CDS             1833..3974
                     /locus_tag="VLJ38_03340"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HSU38568.1"
                     /translation="MKLGRTELSSLLLALAAIASVLVVLATRNAPTTTERDARAKNLV
                     PVWHEDEISRIELRRGDSVLDLERTSDGFVVKTPAPEPADDAAAQKLVSGIGFLTPVR
                     RLEGADVHAHGLDQPRATLAFDMGARKYVLGLGDDAPAPAGAVYVALDGAGASRAAAV
                     IPAEGAKLFATRTDDLRRTALVTLGERDVKELALERPDGKLTLTRAGALGFRLDGGER
                     ASRDATQPLFTALTRLAATRFLGVQAAEAARGSAPLTRVTLTPRDGKLAKEVLELGGA
                     CPGAPDELIASVRSPRARAACVAADVLGQLSFEKAALEDRYPLAARKDEIEALTLERD
                     GKKLTLERQGTSFLLRAPREANVTLDAGNRRLEALARALAEPVPHPDANALGFEPPHG
                     TVLARVIGDDDQAHEERLELGKTAPDGTLYLRRDDGRVLALGREAARAFAVDTTLLRS
                     LKLLDFALSSVVELELSAPEHQLVRRVPNGFELAEPRGFGDDGELTTDAVLALGSLTA
                     VRFVADDDDGTFGLATPLCTARVRLEGNDAGAPEHTLRVGRATPGGYFAALAGAPGVF
                     IVERGVVERLSTLLVSRAAFMVEPSTLARITLRTPKHEIVLERRGGELVTKSGDVPAS
                     TVADALETLASLRAEAALHTGPARATEGFATPALTVELEPSPGLGKRRVYRFGSTESY
                     RDEVVRDARADGIDATFAVADGKLRPLFELF"
     gene            complement(4114..5448)
                     /locus_tag="VLJ38_03345"
     CDS             complement(4114..5448)
                     /locus_tag="VLJ38_03345"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSU38569.1"
                     /translation="MMKKTLSTLGLLALASCSQQPAAAPPPPPPPPPPVAPAPMATMP
                     APAAEAPKPPPATGAERAKGFSECWAAWSAKDWAKFGACYAENATSEQVDSGMAPLVG
                     RKEIVDRTAKMGSEAPDQTGELELVLVNGNNVAAVALVKGTNAGPLLSPTGELPATKK
                     KFGLLMGHAAELTEDGRAVAHDRQYFDAGTFLGQLGLVKMPHRKVLEKGAAEKPVVVA
                     TGSDAEKANLAAAAKTLEAFNKHDVPGLVGMLADDVVFSDVSAPADRVGKKAVEKSYK
                     DMFKAFSDLKLEVARAWPAGDYLVWEGSFVGTNDGAMPSMGINKPTGKKVSARYLEID
                     KLVNGKVKDMWIFDNGMAFAMQLGLVPPPGAKPAGGAPAPAAQAGAPGAKPGAGPAAS
                     AKAAAPAPTAAQAPMRKPVAAAPAEPQVPMMKPGAAAPTAPAAGTAAPAPKK"
     gene            complement(5663..>5778)
                     /locus_tag="VLJ38_03350"
     CDS             complement(5663..>5778)
                     /locus_tag="VLJ38_03350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4215 domain-containing protein"
                     /protein_id="HSU38570.1"
                     /translation="YCGDGKVQKPYEECDDHNNKNGDGCSAACKKETQVPR"
BASE COUNT          849 a         2107 c         1922 g          900 t
ORIGIN      
        1 gctcggcacg ctcatgagct cgctgtccaa gagccagctg attgcgctct tgctcgcgat
       61 cttcgcggaa ttcggcctgt tcgtgctcgg ggtcggcgag tacgtgttcg agccggggct
      121 catgcgcgat ctatgcgcgc acgtctcgat ggcgtcgcaa atggaggaga tgtcgcgcgg
      181 catcgtcgat ttgcggcgcg tcgtgttcga cggctcgctc gccgcggcga gcctcttcgt
      241 cacgggccgt gtcgtcgatt cgtggaggtg gggttgagct cggccgctcc ctcgccgccc
      301 gccgcgggcg ttcgcccgca acacacgcgc tcgtcgaagt tgttctcggc gctcggcgtg
      361 ctggcggccg tggtgatcgc ggtcaacgcc aacgtgctca cggcccgctt ttacaaacgc
      421 tgggacgtct cgagcggcgg tctttacacg ctctcccccg cgacggtgac gatcctccgc
      481 gagctccgcg atccggtcac gctcaccatc ctgctcgcgc gcaccgatcc gctcttgccc
      541 ccgctccgac aattgctcgt gagctacggc gccgagagct cgaagctcga ggtgaagtac
      601 ctcgatccgg aacagaatcc ggcacaattt gcggcggttc agcaaaaata cggcatcagc
      661 gccggcaagg cggaggacgg acgcatcgtt accgacgccg tgatcctggt cgcgcgcggc
      721 gatcgcagct ggttcgtcac gagcgatcag ctcggccaga ccgacgacga cggtcgcgcc
      781 aagccgcggc tcgagcaagc gctcaccgag ggcattgccg gcgtgctcgg caacgagaag
      841 gcgaagctct gctttgcgac gggccgcggg gaagcgtcac tcgacgacgt ggcacccgac
      901 gggctcgccg agctccggcg ccggctcgaa aagaacaatt tcgagacgga gccgctcgat
      961 ctgacgcgcc ccgacgcaca aaagctgctc gaaagctgcc gcttgctcgc catcgtcgcg
     1021 cccgagcagc cgtacggcgc cgacgctacc gaacgcgtga agcgctacgt cacgtcgggc
     1081 ggtagcctcg tcgctttcgt gggcccgacg ttcggcgacg atgctcgcgt cgcgagctcg
     1141 ggactcgagc cgctcttcga gctcgggggc gcgcggctcg aacggaacgt cgtgctcgaa
     1201 accgaaccga gccggcgcct gccgcgcggc gccggtgaag tgttcttcgc gacgccggtc
     1261 gaacacgccg ccacacgcgg cctcgtgctg gaaggcggca aggccgagct cagtccgctc
     1321 gtgagcgaga gccgcagctt gacgctccaa agcggcggcc ccgcgcgtcc gctgctcaaa
     1381 tccagccccg aagcgctcgc gatcgacgac gtgaaggccg tgctcgacgg caagggcccg
     1441 ccgcccgacg cgccgcacgc cgagcggatc gtcgccgcgg ccgccgagct gcccaagccc
     1501 aaggactcgc ccgcgaagca cggtccgcgc ttggtcttgg ccggcttcac gaacctggca
     1561 cggtcgcgca gctttcagga ctcggcgctc gtcggcgatc gcctgctcgt cgaaaactcg
     1621 atcgcgtggg ccgccgctcg cccgccgatc gtcagcgttc cggagaagcc ggcgcgcgcg
     1681 ctcgggctcg cgctcacgga ggaatcactc ggcgaggtgc tgcgttacgt gctgatgtac
     1741 atgccggggt cggcgctcgt gatcggcgcg ttcgtgctcc tgcgccggcg tgcccaggaa
     1801 cgcgcctcgc gcaaggcggc gccccggacg tcatgaagct cggacgcacg gagctctcga
     1861 gcctgctgct cgcgctcgct gcgatcgcga gcgtgctcgt cgtgctcgca acgcgcaatg
     1921 cacccaccac gaccgaacgc gacgcacgcg cgaaaaacct cgtacccgtc tggcacgaag
     1981 acgagatcag ccgcatcgag ctccggcgtg gcgactcagt gctcgacctc gaacgcacga
     2041 gcgacggctt cgtcgtcaaa acgcccgcgc ccgaacccgc cgacgacgcc gccgcgcaaa
     2101 agctcgtgag cgggatcggc tttttgacgc ccgtccggcg actcgagggc gcggacgtcc
     2161 acgcccacgg cctcgatcag ccgcgcgcga cgctcgcgtt cgacatgggc gctcgaaagt
     2221 acgtgctggg cctgggcgac gacgcacccg caccggccgg tgccgtctac gtcgcgctcg
     2281 acggcgcagg cgcgagccgt gccgcggccg tcatcccggc cgagggcgca aagctcttcg
     2341 cgacacgcac cgacgatctg cgccggacgg cgctcgtgac gctcggcgag cgcgacgtga
     2401 aggagctcgc gctcgagcgt cctgacggta aattgacgct cacccgcgcc ggtgcgctcg
     2461 gttttcgtct cgacggcggc gagcgcgcga gccgcgacgc cacgcagccg ctcttcaccg
     2521 ctctcacgcg cctcgccgcc acgcgctttc tcggcgtcca ggcagccgaa gcggctcgcg
     2581 gcagcgcgcc gctcacgcgc gtcacgctca cgccccggga cggcaagctg gccaaggaag
     2641 tgctcgagct cggcggcgcc tgtccgggag ctcccgacga gctcatcgcc agcgtgcgtt
     2701 caccgcgcgc acgtgccgct tgcgtcgccg ccgacgtgct cggacagctc tcgttcgaaa
     2761 aagcggcgct cgaggaccgt tacccgctcg ctgcgcgcaa ggacgaaatc gaggcgctca
     2821 cgctcgaacg cgacggtaag aagctgacgc tcgaacggca gggcacgagc tttctcttgc
     2881 gcgcgccgag agaagcgaac gtcacgctcg atgcgggcaa ccgccgcctc gaagccttgg
     2941 cgcgcgctct cgccgagccc gtgccgcacc ccgatgcgaa cgcgctcggc ttcgagccgc
     3001 cgcacggcac ggtcctcgcg cgcgtcatcg gcgacgacga ccaagcgcac gaagaacggc
     3061 tcgagctcgg gaaaacggcg ccggacggca cgctctacct ccgccgcgac gacggccgcg
     3121 tgctcgcgct cgggcgcgaa gccgcgcgcg cctttgccgt cgacacgacg ctgctccgga
     3181 gcctcaagct gctcgacttc gcgctatcgt cagtagtcga gctcgagctc tcggcgccgg
     3241 agcatcagct cgtccgtcgc gtgccgaacg gcttcgagct cgccgaaccg cgcggcttcg
     3301 gcgacgacgg cgagcttacg acggacgccg tgctcgcgct cggctcgctc acggccgtgc
     3361 gcttcgtggc tgacgacgac gacggcacat tcgggctcgc cacgccgctc tgcacggcgc
     3421 gcgtgcggct cgaagggaac gacgcgggcg cgcccgagca cacgctgcgc gtcggccggg
     3481 caacgccggg cggctatttc gccgcgctcg cgggcgcgcc gggcgtcttc atcgtcgagc
     3541 gcggcgtcgt cgaacggctc tcgaccctgc tcgtgagccg cgccgcgttc atggtcgagc
     3601 cgagtaccct cgcgcggatc acgctccgca cgcccaagca cgaaatcgtg ctcgaacgcc
     3661 gcggcggcga gctcgtcacg aagtccggag acgtgccggc ctccaccgtc gccgacgccc
     3721 tcgagacgct cgcgagcctg cgcgccgaag cggcgctcca caccggtccc gcgcgcgcga
     3781 ccgagggctt cgccacgcct gcgctcaccg tcgagctcga gccgagccca ggactcggca
     3841 agcgccgcgt ctaccgtttc ggcagcacgg agtcgtaccg cgacgaggtc gtgcgcgacg
     3901 cgcgcgccga cggcatcgac gcgaccttcg ccgtcgcgga cgggaagctc cggccgctgt
     3961 tcgagctgtt ttgacggcgc gcgacccgcc ccgtgaacgt gagcgtgacc gcgcccgacg
     4021 agcgaacacg aacacaaaaa gcagcggccc cgcgaaagcc tggtgccttc gtggggccgt
     4081 tgttcgtaga gacggcggtc gagccgccga acttcacttc ttcggcgcgg gggcggcggt
     4141 gcccgcggca ggtgccgtgg gtgcagccgc accgggtttc atcatcggga cttgcggctc
     4201 cgcgggcgcg gccgcgacgg gcttcctcat cggagcttgc gcggccgtgg gcgcaggagc
     4261 cgcagctttg gcgctggcag ccgggcctgc gccgggcttc gcgccaggcg cgccggcctg
     4321 tgccgcgggg gcgggagcgc caccggcagg cttcgcgccg ggcggcggca cgaggcctag
     4381 ctgcatcgcg aaggccatgc cgttgtcgaa gatccacatg tccttcactt tgccgttcac
     4441 gagtttgtcg atctcgaggt agcgcgcgct caccttctta ccggtcggct tgttgatgcc
     4501 catcgacggc atggcgccgt cgttcgtgcc gacgaacgag ccttcccaca cgagatagtc
     4561 acctgccggc caagcgcgcg cgacctcgag cttgagatcg ctgaacgcct tgaacatgtc
     4621 cttgtacgat ttctcgacgg ccttcttgcc gacgcgatcg gccggcgccg atacgtcgct
     4681 gaacacgacg tcatcggcca gcatgccgac taggcccggc acgtcatgct tgttgaacgc
     4741 ctcgagcgtc ttggccgccg cggcgaggtt cgccttctcg gcgtcactcc cggtcgccac
     4801 gaccacaggc ttttccgccg cgcccttctc gagcaccttg cggtgcggca tcttgaccaa
     4861 gccgagctgg ccgaggaacg ttccggcgtc gaaatactgg cgatcgtgcg ccacggcgcg
     4921 cccgtcttcc gtcaactcgg cggcgtgccc catgagcaac ccgaacttct tcttcgtcgc
     4981 ggggagctca ccggtcggcg acagcagcgg ccctgcgttg gtgcctttga cgagcgcaac
     5041 cgccgcgacg ttgttgccgt tcacgagcac gagctcgagc tcgccggtct ggtcgggcgc
     5101 ttcgctgccc atcttcgcgg tccggtcgac gatctccttg cgaccgacca gcggcgccat
     5161 gccgctgtcg acctgctcgg aggtcgcgtt ctcggcgtag caggcgccga acttcgccca
     5221 gtccttcgcg ctccaggcgg cccaacactc cgaaaatcct ttcgcccgtt ccgcgcccgt
     5281 cgcgggcggc ggcttgggag cctcggcggc cggagcgggc atcgtcgcca tgggggccgg
     5341 agccacgggt ggcggaggag ggggcggcgg cggcggggcc gcggctggct gctgactaca
     5401 gctcgcgagc gcgagcaatc ccaacgtgct gagcgtcttc ttcatcattc tcgtgtgcct
     5461 ttcctgcctc ggtgtcggaa gtaccctgcc ctccgtgcga gaagctttgc cttctacacc
     5521 gatcctcacc cgcgcgaacc atcaaaaaac gacaccgaag ttgcgcagac acacaacgca
     5581 cctcggcact caccccctcg cgaatacctc cctcacgtga cgcgcggagg gcccgtcaac
     5641 aggccctcca tgcgcgaccc gctcagcgcg ggacctgggt ctctttctta caagccgcgc
     5701 tgcagccgtc gccgttcttg ttgttgtggt cgtcgcactc ttcgtacggc ttctgcactt
     5761 tgccgtcccc gcagtacg
//
LOCUS       DATIML010000192         2542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_905349, whole genome shotgun sequence.
ACCESSION   DATIML010000192 DATIML010000000
VERSION     DATIML010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_905349"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VLJ38_03355"
     CDS             complement(<1..495)
                     /locus_tag="VLJ38_03355"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSU38571.1"
                     /translation="MSAPAKRLATYADLVALPEEARAEIIAGELVLEPSPTPIHQSAV
                     GELYAELRNPFQRGRGGPGGWWLIQDVDVEFGAHDICRPDITGWRKTNVPSFPAERPV
                     RHRPDWICEALSPGTALRDQSDKRAIYQRAKVPWYWLLDPSNRTLTVLRLVEDGYIVE
                     RVAGD"
     gene            658..1617
                     /locus_tag="VLJ38_03360"
     CDS             658..1617
                     /locus_tag="VLJ38_03360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSU38572.1"
                     /translation="MRAPYAFTLLSAALALTSAARAQTATPPAAAPSTPVAQQAPEPS
                     PTPDVPTPPPASQPEPPPPPEAPPVTDTVQTPGATTSSSGAPAAASVNAPQPTVDSPE
                     PKGAPDAWLDGHALAVEGLFRGGSRVGSASVASDTDEKAGIGFDLGAWFRIARAFSLG
                     LELRRTDLGNLSFTSGQSTVNAGYASTALELGARVYPFRWNSAELYLGIHTGLAWQDV
                     DANGLRPSVNLEPATVFECSDSTGPGFALGAELGAEVRLARAFWLVGNVAGDGYQLTS
                     EKIGDCVNGIGSVTSISVGVGLLYAFDLGREARVASARSPARF"
     gene            1692..>2542
                     /locus_tag="VLJ38_03365"
     CDS             1692..>2542
                     /locus_tag="VLJ38_03365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38573.1"
                     /translation="MTSWSGANAPELVQRERGEALALSFAFTILTSAFLLFQVEPLIS
                     KVILPWFGGSPAVWTTCLLFFQTLLFLGYTYAHLTTRYCSAARQAWLHLGLVLLAVLT
                     LPIVPAASAKPTGHDDPTFGVLALLARSVGLPYFVLSATGPLVQGWFAAAYPGRSPYR
                     LYALSNIGSLLALVSYPVIFEPAFATGTQARLWSAAFVVFALLLGGGALSRLRASREG
                     VTAINAVSAINAINAVSLDAEQVNEAAPSVFRRACWVALPALASALLLATTNHVCENV
                     AVIPFLWV"
BASE COUNT          381 a          892 c          825 g          444 t
ORIGIN      
        1 gtcccccgcg acgcgctcga cgatgtaccc gtcctcgacg agccgcaaga cggtcagcgt
       61 ccggttcgac ggatcgagga gccagtacca ggggaccttg gcccgctgat agatcgcacg
      121 cttgtcgctt tggtcacgca gggccgtgcc tggtgaaagg gcctcgcaga tccaatccgg
      181 gcggtgacgg acgggacgct ctgccgggaa ggaggggacg ttcgttttcc gccagcccgt
      241 gatgtcaggg cgacaaatgt cgtgggcgcc gaattccacg tcgacgtctt ggatgagcca
      301 ccacccgccc gggccaccgc gaccgcgctg aaacggattg cggagctcgg cgtagagctc
      361 gccaacggcg ctctggtgga tcggcgtggg cgaaggctcg aggacgagct cgccggcgat
      421 gatttcagcg cgtgcctctt ccggcagcgc gaccaagtcg gcatacgttg cgagcctttt
      481 cgccggagcc gacacgcctg aatgatgtca cgacgtgcga cgggacgcga cttcccgaaa
      541 agcgagcgca ggcccgcgcg cgcccgcgag gcccgccatc gggcgacgtg ttttcggatg
      601 tggctccaaa aagccggcgt ttgcaggcta gggccgttcc gcgcgatagt tcgacgcgtg
      661 agagcgccct acgcgtttac gttgctcagc gccgccctcg cgttgaccag cgccgcacgc
      721 gcgcaaacgg cgacgccacc cgcggccgct ccgtcgacgc ccgtcgcgca acaagcgccc
      781 gagccgtcgc cgacgcccga tgtgccgacg ccgccgcccg cgtcgcaacc cgaaccgccg
      841 ccgccgcccg aagcgccgcc cgtcaccgac acggtgcaga cgcccggtgc gaccacatcc
      901 tcgtcaggcg ctcccgccgc agccagcgtg aacgcgccgc aaccaaccgt tgatagtccg
      961 gaaccgaagg gcgcccccga cgcgtggctc gacggccatg ccctcgccgt cgaaggactc
     1021 ttccgcggcg gcagtcgcgt cggttcggcg agcgtcgcgt ccgataccga cgaaaaagcg
     1081 ggcatcggct tcgatctcgg cgcctggttc cgcatcgcgc gcgcgttcag tctcggtctc
     1141 gagctccgcc gcaccgatct cggtaacctc tcgttcacga gcggccaaag cacggtgaac
     1201 gccggctacg cgtcgacggc gctcgagctc ggcgcgcgcg tctatccatt ccgctggaac
     1261 agcgccgagc tctacctcgg catccacacg gggctcgcct ggcaggacgt cgacgccaac
     1321 ggtctccgcc cgtccgtgaa cctcgagccc gctacggtct tcgaatgctc ggattcgaca
     1381 gggcccggct ttgcgctcgg cgccgagctc ggcgctgagg tccgactcgc gcgcgctttc
     1441 tggctcgtcg gcaacgtggc gggcgatggc taccagctca cgagcgaaaa gatcggcgat
     1501 tgcgtgaatg ggatcggctc cgttacgtcg atctccgttg gcgtcggcct cctctacgcc
     1561 ttcgatctcg gtcgcgaagc gcgcgtcgcg tcggcgcgct cacccgcgcg tttttgacac
     1621 agctgacggc actcgacatc cgacggcaac cagcgcaaaa cgcgcggctg cgtggataaa
     1681 gggagccacc catgacgagt tggtccggcg cgaacgcccc tgaattggtt cagcgtgagc
     1741 ggggcgaagc cctcgcgctg agcttcgctt tcacgattct cacgagcgct ttcttgctct
     1801 tccaagtgga gccgctcatc agcaaggtga tcctgccgtg gttcggaggc agcccggcgg
     1861 tttggaccac gtgcctgctg ttctttcaga cgctgctgtt tctcggctac acgtacgcgc
     1921 acctgacgac gcgctactgc tcggcagcgc ggcaggcgtg gttgcacctc gggctcgtgc
     1981 tgctcgccgt gctcacgctg cccatcgtcc ccgctgctag cgcgaaaccg accggtcacg
     2041 acgatccgac gttcggcgtg ctcgcgctcc tcgcgcggag tgtcgggctg ccgtatttcg
     2101 tcctctccgc aacgggaccg ctcgttcaag gctggttcgc agcggcttat ccgggacgct
     2161 cgccctatcg gctctacgcg ctctcgaaca tcggttcgct gctcgcgctc gtgagttacc
     2221 cggtgatctt cgagccggcg ttcgcgacgg gaacgcaggc gcggctctgg tcggcggcgt
     2281 tcgtcgtgtt cgcgctactg ctcggcggcg gagcgctttc gcgtctgcga gcgtcacgcg
     2341 aaggcgtgac tgctatcaat gctgtcagtg ctatcaatgc tatcaacgcc gtgtcgctcg
     2401 acgcggagca ggtaaacgaa gccgcgccga gcgtcttcag acgcgcgtgc tgggtggcgc
     2461 tgccggcgct cgcgtccgcg ctgcttctcg cgacgaccaa tcacgtctgc gaaaacgtcg
     2521 ccgtcatccc gtttctctgg gt
//
LOCUS       DATIML010000193         4009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5526837, whole genome shotgun sequence.
ACCESSION   DATIML010000193 DATIML010000000
VERSION     DATIML010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4009
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5526837"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="VLJ38_03370"
     CDS             <1..705
                     /locus_tag="VLJ38_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38574.1"
                     /translation="MYRSAQFRGAFWVGLFVLACFVRLILVDAGDLTSALADPARRGL
                     EVIDVLYTKSYSRFGALVLGVLAAYVFRYRSDLLQRLERSPGLSWSCAGASLSCMLLL
                     SLPSTPLDIPFFQIGDTWPEWLRPAALALGRYLFSLAFACLILLTLSRSSAGRAFARV
                     LSVRWFYPVAQLSYGVYLFHPLVIESFPQPEATYASVGALFVKASLLTYALALIVHLA
                     VERPFMNLRRVWQRAT"
     gene            complement(727..1998)
                     /locus_tag="VLJ38_03375"
     CDS             complement(727..1998)
                     /locus_tag="VLJ38_03375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38575.1"
                     /translation="MQSLLIPLSDWLWRGLALLWLALAPYAAKVEVSSAHSVLEAAVR
                     VAVAGAVLGVLGYGVVRLAGRSRLGAALVAVAVVEALALGAVFAGPRAPLGRGLIWLF
                     PVVWGVVAFHAAGSLAELFARSQSRESPSSRERAGWAAAAVVFGLLGVAASYRRIGSA
                     DALLVAALRSEPGNETLALRFRDAEQRRGDARGAAQTLRACVSANADACGCALPLLDA
                     ALERGAYAEAGGILVRAAPRCREAPRASGMLAEALAGGGELAAARQAADIALAKDRSD
                     PHALYAKALLAERDADLTLARHLLERAITAGRGGRARVDLGALLFKSGELAGARRLFE
                     ATLHDDPNDVPALYDLALVDQTENHYHPAREGYLKVLRLDPKNLDARYNLAVLTQAIG
                     ARSEAEHHVAEFEKAAAPGDTRLAALKRLVQ"
     gene            complement(2041..3093)
                     /locus_tag="VLJ38_03380"
     CDS             complement(2041..3093)
                     /locus_tag="VLJ38_03380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38576.1"
                     /translation="MAWVLVAAMLSAPLSAFAQSDEQRAAARELATSGLDAFKAGKYD
                     QALDNFTKAESLFHALPHLLFIARSQAKLGHYVQAREAYLKITREVLPANAPQAARDA
                     QSNASLEVGNVEPKIGHVTINVAGKEQLQNLTVTLDGTVVPAVLIGASMPIDPGEHLI
                     EAVATGKRGKSNIAVSSGQRQEVALRLETDASAVPPIVAVVPVAAAAQPGPTPPPQTP
                     PAAQPAPAPADTSANHGTNGLRIGSYVAFGVGAVGIAGGIAFTLKSSSKRSDADKLCT
                     LPNGGCDLALKPQIDSLDSDADSARTLGIVGFALGAVGIGTGVTLLVLSMGHAEKTAS
                     IAPWIGVNSAGVRGKF"
     gene            complement(3252..3746)
                     /locus_tag="VLJ38_03385"
     CDS             complement(3252..3746)
                     /locus_tag="VLJ38_03385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38577.1"
                     /translation="MAQRSLHRTLLVVVELGASWPAALMSAEAGVCRVLAEVEGEGPL
                     AFAARVEDFSATAFPRGTQVNVALVACNQRADETAEAARRAMAECLVASLAPTGSLSF
                     TACDDATDRFRRRLYDLVADLGKAAAAEGRVRAIFGEDSRRASGPVTSAGVTLVGGSV
                     PRVA"
BASE COUNT          637 a         1429 c         1315 g          628 t
ORIGIN      
        1 atgtaccgga gcgcgcagtt tcgcggggct ttttgggtcg ggctcttcgt gctcgcgtgc
       61 ttcgtgcgct tgatcctcgt cgatgccggc gacctcacga gcgcgctcgc cgatcccgcg
      121 cgccgcggcc tcgaggtcat cgacgtgctc tacaccaaga gctacagccg tttcggcgcc
      181 ttggtgctcg gcgtgctcgc tgcctacgtc ttccgctacc gctccgatct cctgcagcgc
      241 ctcgagcgtt caccgggact cagctggagc tgcgcgggcg cgtcgctgtc gtgcatgctc
      301 cttctctccc tgccgtcgac gccgctcgac attccatttt tccagatcgg cgacacctgg
      361 ccggaatggc tccggcccgc cgcgctcgcc ctcggtcgct atctcttctc actcgctttc
      421 gcgtgcttga tcctgctgac gctgagcagg tcgagcgcag gccgcgcgtt cgcgagggtc
      481 ctgtcggtgc gctggtttta cccggtcgct cagctctcgt acggcgtgta cttgtttcac
      541 ccgctcgtca tcgagagctt cccgcagcct gaggcgacct acgcgtccgt cggcgcgttg
      601 ttcgtaaaag cctcgctcct cacgtacgcg ctggccctga tcgtgcacct cgccgtcgaa
      661 cgaccgttca tgaacctgcg ccgcgtctgg cagcgagcca cttagcgctg ccgtacaccg
      721 tgcgcgtcac tgcacgaggc gcttcaatgc cgcgaggcgc gtgtctccgg gcgcggccgc
      781 tttttcgaat tcggcgacgt gatgctctgc ctcggagcgc gcgccgatgg cctgggtgag
      841 cacggccagg ttgtacctcg cgtcgaggtt cttcggatcg agccgcagca ccttcaggta
      901 cccctcgcgc gccgggtggt agtggttctc cgtctgatcg acgagcgcca gatcgtagag
      961 cgcgggcacg tcgttcggat cgtcgtgcag cgtcgcctcg aacagccgcc gcgcaccggc
     1021 aagctcaccg gatttgaaga gcagcgcgcc gaggtcaacg cgagcgcgcc caccgcgacc
     1081 agccgtgatg gctcgttcga gcaggtgccg agcgagcgtc aggtcggcgt cccgctcggc
     1141 gagcagcgcc ttcgcgtaga gcgcgtgcgg atcgctgcga tccttggcga gcgcgatatc
     1201 ggcggcttgg cgcgcggcag cgagttcgcc gccgcctgcg agcgcttccg cgagcatccc
     1261 ggacgcgcgc ggcgcctcac gacaacgggg cgccgctcgc acgagaatgc caccggcctc
     1321 ggcgtaagcg ccgcgctcga gcgccgcgtc gagcaaaggc aacgcacaac cgcacgcatc
     1381 cgcgttcgcc gacacgcacg cgcgcagcgt ctgcgcggcg ccgcgcgcgt cgccgcgccg
     1441 ctgctctgcg tcgcgaaagc ggagcgcgag cgtctcgttg ccgggctcgc tccgtagcgc
     1501 ggcgacgagc aaggcgtccg ccgacccgat gcgccggtaa ctcgcggcaa ctccgagcag
     1561 accgaagacg acggccgccg ccgcccagcc tgcgcgctca cgagagctcg gcgactcgcg
     1621 ggactggctg cgcgcgaaga gctcggccag cgagcccgcg gcatggaacg ccacgacgcc
     1681 ccaaaccacg gggaacagcc aaatcaagcc gcgcccgagc ggcgcgcgcg gtcccgcgaa
     1741 aacggccccg agcgcgagcg cttccacgac ggccaccgcg acgagcgccg ctcctagccg
     1801 actccgccca gcgagccgca cgacgccgta acccaagacg ccaagcaccg cgcccgcaac
     1861 cgcgacgcgc acggcggctt cgagcaccga gtgcgcggac gatacctcga ccttcgccgc
     1921 gtacggcgcg agcgcgagcc acaagagcgc gagtccgcgc cagagccaat cggagagcgg
     1981 aatgagcagc gactgcatgc taacgagcgc gtcgacgcga gcgagcgcgc accgcgcgca
     2041 ctagaacttg ccgcgcacgc ccgcgctgtt cacgccaatc cagggcgcga tcgaagccgt
     2101 cttctcggcg tgtcccatgg agagcacgag cagcgtcacg cccgtgccga tacccacggc
     2161 gccgagcgcg aagcccacga tgccgagcgt gcgcgcagag tccgcgtccg aatcgaggct
     2221 gtcgatctgc ggcttcagcg cgaggtcgca cccgccgttc ggtaacgtgc agagcttgtc
     2281 cgcatcggag cgtttgctcg acgacttgag cgtgaacgcg ataccccccg cgataccgac
     2341 ggcgccgacg ccgaacgcga cgtacgagcc gatgcggagg ccgttcgtgc cgtggttggc
     2401 gctcgtgtcc gcgggcgccg gcgcaggctg cgcggcggga ggcgtctgcg gcggcggagt
     2461 cgggccgggc tgcgcagcag cggccaccgg caccacggcg acgatcggcg gcaccgcgct
     2521 cgcgtccgtt tcgagcctga gcgcgacctc ctgccgctgc ccggacgaaa cggcgatgtt
     2581 cgacttgccg cgcttgcccg tcgcgacagc ctcgatcaag tgctcgcccg ggtcgatcgg
     2641 catggacgcg ccgatgagca cggcgggaac caccgtcccg tcgagcgtca ccgtcaggtt
     2701 ctgcagctgc tctttgccgg cgacgttgat cgtgacgtgt ccgatcttcg gttcgacgtt
     2761 gccgacttcc aaggaggcgt tgctctgagc gtcacgcgcg gcttgcggcg cgttcgcggg
     2821 caacacctcc ctcgtgatct tcaagtacgc ttcgcgcgcc tgcacgtagt ggccgagctt
     2881 cgcctgcgag cgcgcgatga agagcaggtg cggcagcgcg tgaaagagcg actccgcctt
     2941 cgtgaagtta tcgagcgctt ggtcgtattt gcccgccttg aaggcgtcga ggcccgacgt
     3001 ggcaagctcg cgcgccgcgg cccgctgctc gtccgactgc gcgaacgccg agagcggcgc
     3061 tgacaacatc gccgccacca aaacccacgc caacctctgc tgcgcttttc gcatcgccat
     3121 ggacagcccg acggatgcta cacgaggtcg cccgcacgac gcgattcagc ggacaactcc
     3181 ccccgggttc cagtgttact ggagcacagc agcatccacg cgcgcgaatc tcgtcgctgg
     3241 gcgacgcccg ctcaggcgac gcggggcacg gaacccccga cgagcgtcac tccggccgaa
     3301 gtcaccgggc cggacgcacg gcgggaatcc tcgccgaaaa tcgcgcggac gcgcccttcc
     3361 gccgcggcag ctttaccgag atccgccacg agatcgtaca aacggcgccg gaagcgatcc
     3421 gtcgcgtcgt cgcaggcggt gaaggaaagc gagcccgtcg gcgcaaggct cgcgaccagg
     3481 cattcggcca tcgcgcgacg ggcggcttcc gccgtctcgt ccgcgcgctg gttacaggcg
     3541 acgagtgcga cgttcacctg cgttccccgc ggaaaagccg tcgcggagaa gtcttccacg
     3601 cgggcggcga acgcgagggg gccctctccc tctacttccg cgagcacgcg gcaaacaccg
     3661 gcttcagcgc tcatcagtgc agctggccaa gatgctccga gctcgacgac gacgagcagc
     3721 gtcctatgca aacttctttg ggccatcgat ttcggaataa gactacgggc gagttacgga
     3781 caagatcccc gtttctttag cgcttctcga acgtacgtgc acgcggggaa acgggttaca
     3841 cctcgagcaa gatacgagcg gggtcctcga tacattgctt gatgcgcttc aaaaaagtta
     3901 cagcctcacg cccatcgatc aagcggtgat cgtaggtgag ggccacgtac atcatggggc
     3961 gaatgaccac agcgccgttc agcgcgatgg gacgctcctg aatggcgtg
//
LOCUS       DATIML010000194         1768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3505128, whole genome shotgun sequence.
ACCESSION   DATIML010000194 DATIML010000000
VERSION     DATIML010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3505128"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..777
                     /locus_tag="VLJ38_03390"
     CDS             <1..777
                     /locus_tag="VLJ38_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38578.1"
                     /translation="PGASVAPRNTRRPPSIVPGPAGATLKDLFTRLEQRMSEYKQAPL
                     LRFLRDPNVDARQKLGFAPHVAHFVLTFGDLCSLVLPEHPARDFYQELVNANAKEDKE
                     HWRWFLSDLAELEQDPTLHYSDAIRAIWGERTRRTRKLSYHLCHLGLASDSLGRLMLV
                     HCIEGAFKATVFDLDAASRQFTEMTGKSLNYLGRSHSESEASHTLENPEIRRRLESVE
                     LPLDAYRKLCDMVDRSFQLFADFADEMLDLALAPPVLKTA"
     gene            832..>1768
                     /locus_tag="VLJ38_03395"
     CDS             832..>1768
                     /locus_tag="VLJ38_03395"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSU38579.1"
                     /translation="MSSTQRGADWTRSELSLLAGEGLSVSVEAAGRALASTDFGNLVR
                     GEAVAIVTPRDEDELARALRFANTRGLSFTARGTGRSSGGQSVAKKSVTLDLSRLDRV
                     GAVDVERREIRCEPGARWRSVVDATLPRGLVPRVLPLNLDLTVGGTISVGGVGSTSHR
                     FGTAAANVTAVEAVTGDGRLLRSADEQELLGATLAGLGRAAVITSATLALRPAPAKVH
                     TYYLLYDELGPWLADLERARSEQRFEHVDGFCSASVQGLRNVPGGRRPFARWFYGLHL
                     SIEHESGALPDRAALLGGFQPRWCVHEEENDAPAYV"
BASE COUNT          283 a          616 c          576 g          293 t
ORIGIN      
        1 ccgggcgcca gtgtggcgcc gcgcaacacc aggcgcccgc cgagcatcgt gcccgggccc
       61 gcgggcgcga cgctcaaaga cctgttcacg cggctcgagc agcggatgtc cgagtacaag
      121 caggctccat tgctacgttt cttgcgcgac ccgaacgtcg acgcgcggca gaagctcggc
      181 ttcgcgccgc acgtcgcgca cttcgtcctc acgttcggcg atctctgttc gctcgtgctg
      241 ccggaacatc cggcgcgcga tttttatcaa gagctcgtga acgccaacgc gaaggaggac
      301 aaggagcact ggcgctggtt tctatcggac ctcgcggagc tcgagcaaga tccgacgctt
      361 cactacagcg acgccatccg cgcgatctgg ggtgagcgca cgcgccgcac acgcaagctt
      421 tcgtaccacc tctgtcatct cggactcgcg tcggactccc tcggccgact catgctggtg
      481 cattgtatcg agggcgcgtt caaagcgacg gtgttcgatc tcgacgccgc ctccaggcag
      541 ttcaccgaga tgacgggcaa gtcactcaat tatctcggcc gcagccactc cgaatccgag
      601 gcgagccaca cgctcgaaaa tcccgagatc cgccgccggc tcgagagcgt ggagctcccg
      661 ctggacgcct atcgcaaact ctgtgacatg gtggatcgct cgttccagct ctttgccgac
      721 tttgcggacg agatgctgga tcttgcgctc gcgccgcccg tcttgaaaac cgcctagccg
      781 cggctcgagc agtcttggag cacgcgagac tagtcaaagg agcaggagca catgtcgagc
      841 acgcagcgcg gcgcagactg gactcgaagc gagctttcgt tgctcgcggg cgaaggtctc
      901 tcggtttcgg tcgaagcggc gggccgcgcc ctcgcgtcca ctgacttcgg caacctcgtg
      961 cggggcgaag ccgtcgcgat cgtgacaccc cgtgacgagg acgagctggc ccgagcgctc
     1021 cgcttcgcga acacgcgcgg cctgtcgttc acggcgcgcg gcaccggacg gagctcggga
     1081 ggtcaatcgg tcgcaaaaaa gagcgtgacg ctcgatctgt cacgtctcga tcgcgtcggc
     1141 gcggttgacg tcgagcggcg tgagatccgc tgcgagcccg gtgcccgctg gcgctcggtc
     1201 gtcgacgcga cgctccctcg cgggctcgtg ccgcgcgtcc tgcccttgaa cctcgatctg
     1261 acggtgggag ggacgatctc ggtcggcggc gtcggctcga cgagtcatcg cttcggaacg
     1321 gccgccgcga acgtgaccgc cgtcgaagcc gtgaccggtg acggccggct cttgcgctcc
     1381 gccgacgagc aagagctcct cggcgccaca cttgccggac tcggccgggc cgccgtgatc
     1441 acgtcggcca cgctcgcctt acgtcccgcg ccggccaaag tgcacaccta ctatctcctc
     1501 tacgacgagc tcggcccgtg gctcgccgac ttggagcgcg cgcggagcga gcagcgcttc
     1561 gagcacgtgg acggcttctg ctcggcgagc gtccagggcc tacgcaacgt gcccggcggg
     1621 cgccgcccct tcgcacgttg gttttacgga ctgcacctct cgatcgagca cgagtcgggg
     1681 gccctgcccg accgcgcggc gctcctgggc ggcttccagc cgcgctggtg cgtgcacgaa
     1741 gaagaaaacg acgcgccggc ctacgtcg
//
LOCUS       DATIML010000195         3987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2639142, whole genome shotgun sequence.
ACCESSION   DATIML010000195 DATIML010000000
VERSION     DATIML010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3987
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2639142"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..951)
                     /locus_tag="VLJ38_03400"
     CDS             complement(103..951)
                     /locus_tag="VLJ38_03400"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HSU38580.1"
                     /translation="MDHPHLLRQIPLFESMEDADLAALGVKLSSRSFQEGDVVFAQGD
                     EGDAMYIIEEGAVDIVAGTGAQRVTVASLFNGQYFGELSLLDGAPRSAAAIAARATLV
                     LSLEREDFVEFVKRRPEAALSIMHELGERMRATNELMTRTVSRNVVEEVEENLSLGDF
                     VADRVAAFGGSWPFIFIFGGFMAFWMTWNSVAGKLAFDPLPFMFLNLFLSTVAALQAP
                     VIMMSQNRQSSKDKAMAVNDYQVNLKNEVSIDKLLRGQGELVQRLAHLERMVGPLRSV
                     APEPRN"
     gene            complement(1188..1790)
                     /locus_tag="VLJ38_03405"
     CDS             complement(1188..1790)
                     /locus_tag="VLJ38_03405"
                     /inference="COORDINATES: protein motif:HMM:NF020771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CerR family C-terminal domain-containing
                     protein"
                     /protein_id="HSU38581.1"
                     /translation="MTAHRAARAPNGDVPHDVATRRRLLEAATELFAERGFRRVTVRA
                     ICERARANVASVNYHFGDKQRLYREVVEAALDTVRDFADHAMRAPDGATAEQKLAHYI
                     DAHLARAQDARTPERSSLLRELFRHELSESTELGAYIVDQAIKPRLRYVGAVVAELLG
                     PAADAQNVERCVLSIQAQCLFPVAAPVALTPMFRRTRADY"
     gene            complement(1787..2902)
                     /locus_tag="VLJ38_03410"
     CDS             complement(1787..2902)
                     /locus_tag="VLJ38_03410"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU38582.1"
                     /translation="MQRTWAIIERELRRFRRSPMLIVMSLMLPIVQLVVLGYAFGGSV
                     KHLNLGVVDQDRGLYAVKVEELTLAIAANARTFDTVRYADLGAAVSDLREGRLNGVLA
                     IPPGFSRRVLAKEDPRISLIEDNTDNFVAVTLAATLNALVSALPGVHATTERISRAPV
                     LDIVEVYPYVPYIQYLLPGSITMSIFMMVMIGGGIIFMDDKARGLHEGYLVTPITRLE
                     LILGFNLSGAIKAVISGSVLMTLGSLIAGVPDPFDPLRLVRLFLVIVVTSTALVSMMF
                     LLMVRMTDPLLPRALFGVLNTVLYFPSGAVYPQQAFPGWMRAIAKVDPFTYAVHALKC
                     LLLKNTGFSAISFDLAYLTLFALLTLGGATLLFKRTL"
     gene            complement(2916..3902)
                     /locus_tag="VLJ38_03415"
     CDS             complement(2916..3902)
                     /locus_tag="VLJ38_03415"
                     /inference="COORDINATES: protein motif:HMM:TIGR01188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU38583.1"
                     /translation="MNAIEVRSLTKRFGTFTAVDHVSFEVKQGEIFGMLGPNGAGKST
                     LIRMLTTLVPPTEGTAIVGGADITGDPDTVRRAIGVIPQAMTSDLELSAEENLLIFSK
                     LYGVPRKRRKELIRELLAAVELTSWADKPVKKLSGGMRRRVEIARGLVHEPRIFFLDE
                     PTTGLDPVSRTAVWEMLKKIKAERDLTVLLTTHYMDEADKLCDRIAIVDHGTLKALDS
                     PIRLKAELAGKVTLDVGFASPPSGWLERLRTLPGVDAVSGDDRFARVTSSSGPGTTMA
                     LLELTHAAGVTVQTLSVNSTTLDDVFVHFTGRQLRDALQEPSLADRHPMLRR"
BASE COUNT          716 a         1272 c         1345 g          654 t
ORIGIN      
        1 ttacacacgc gcaatcggaa cgaaacactg cgtgaaacac tctcgaagcg agctcgctac
       61 tcgcagtgct agctcacgtc gtcgcgtgct cgcctggcgc gctcagttac gcggctcggg
      121 cgcgaccgac cgcaacggtc cgaccatgcg ctcgagatgc gcgagccgct gcacgagctc
      181 accctgtccg cgcaagagct tgtcgatgct cacctcgttc ttgaggttca cttggtagtc
      241 gttgacggcc atcgccttgt ccttcgacga ctggcggttc tgactcatca tgatcacggg
      301 agcctggagc gccgcgacgg tcgagaggaa aagattcaag aacatgaagg gcagcgggtc
      361 gaaggcgagc tttccggcga cggagttcca ggtcatccag aacgccatga accccccgaa
      421 gatgaagatg aagggccatg agccgccgaa cgccgcgacc ctgtcggcga cgaaatcacc
      481 gagcgacaga ttctcctcca cctcctcgac gacgttgcgc gaaacggtgc gcgtcatcag
      541 ctcgttcgtg gcgcgcatgc gttctccgag ctcgtgcatg atggagagcg cggcttcggg
      601 gcgacgtttg acgaactcca cgaagtcctc gcgttcgagc gagagcacga gcgttgcccg
      661 cgccgcgatc gccgcggcgg agcgcggcgc gccgtcgagc aacgagagct cgccgaagta
      721 ctgaccgttg aagagcgagg ccaccgtgac gcgctgcgcg cccgtgcccg cgacgatgtc
      781 gaccgcgccc tcctcgatga tgtacatcgc gtcaccctcg tcgccttgcg cgaagacgac
      841 gtcgccctct tggaaagagc gggagctcag ctttaccccg agcgcggcga ggtcggcgtc
      901 ctccatcgat tcgaagagcg ggatttgacg cagtaaatgg ggatgatcca tgttggtatc
      961 ctcggacctt atcccctcag gttatcaccc tcgagcggag ccaacgctcg aagcccgcgc
     1021 ggagctcagc tggagcgggc ggtccggact cgcgcggtgc tggcacgttt ccgtcgtcct
     1081 gattttactg ccccgccccg cgcgacggca tcgaggccgc cgcgcctggc agctcgacac
     1141 gccaaaatgc ctgcgcgcga gaactcgaag acgtgtcggg ccagggccta gtagtccgcg
     1201 cgcgtccggc gaaacatcgg cgtgagcgcg acgggagccg ccacgggaaa caggcattgc
     1261 gcctggatcg acagcacgca gcgctcgacg ttttgggcgt cggcggccgg accgagcagc
     1321 tccgccacga ccgcgccgac gtaccggagc cgcggcttga tcgcctgatc gacgatgtaa
     1381 gcgccgagtt ccgtcgactc gctgagctcg tgccgaaaga gctcgcgtaa gagcgacgag
     1441 cgctcgggcg tgcgcgcgtc ttgcgcgcga gcgaggtggg cgtcgatgta gtgcgcgagc
     1501 ttttgctcgg ctgtcgcccc gtccggcgcg cgcatcgcgt gatcggcgaa atcgcgcacc
     1561 gtgtcgaggg ccgcctcgac gacttcacga tagagccgct gcttgtcccc gaagtggtag
     1621 ttgacggacg cgacgttggc gcgcgcgcgt tcgcagatcg cgcgcacggt gacgcgacgg
     1681 aagccgcgct ccgcgaagag ctccgtcgcg gcctcgagca gccggcgccg cgtcgccacg
     1741 tcgtgcggaa cgtcgccgtt cggggctcgc gcagcgcgat gggccgtcac agcgtcctct
     1801 tgaagagcaa cgtggcgccg ccgagcgtga ggagcgcgaa gagcgtcagg tatgcgagat
     1861 cgaagcttat cgccgaaaac ccggtatttt tcagcagcag gcatttgagc gcgtgcacgg
     1921 cgtacgtgaa ggggtcgacc ttggcgatgg cgcgcatcca gcccggaaac gcttgctgcg
     1981 ggtaaaccgc gccgctcgga aaatacaaga cggtgttcaa gacgccgaag agcgcgcgcg
     2041 gcaagagcgg gtcggtcatg cgcaccatca gcaagaacat catgctcacg agcgcggtcg
     2101 acgtgacgac gatgacgagg aacaagcgta cgagtcgcag cggatcgaac ggatccggca
     2161 cgcccgcgat cagcgagccg agcgtcatga gcacgctgcc cgagatcacg gctttgatgg
     2221 cgcccgaaag attgaagccc aagatcagct cgagccgggt gataggcgtc acgaggtagc
     2281 cctcgtgcag accacgcgct ttgtcatcca tgaagatgat gccgccgccg atcatcacca
     2341 tcatgaagat ggacatcgtg atcgagcccg gcaagagata ctggatgtac ggcacgtacg
     2401 ggtacacctc gacgatgtcg agcaccggcg cgcggctgat gcgctcggtc gtcgcgtgca
     2461 cgccaggcaa tgccgagacg agagcgttca gcgtcgccgc gagcgtcacc gcgacgaagt
     2521 tgtccgtgtt gtcctcgatg agcgagatgc gcgggtcctc cttggcgagc acgcgccgcg
     2581 aaaatcccgg cggaatcgcg agcacgccgt tcagacggcc ctcgcgcaga tcgctgacgg
     2641 cggcgccgag gtcggcatag cgcaccgtgt cgaacgtacg agcgttcgcc gcgatcgcta
     2701 aggtgagctc ctccaccttg acggcataga gaccgcggtc ttgatcgacc acgcccaggt
     2761 tcaggtgctt gacgctgccg ccgaacgcgt agccgagcac gacgagctgc acgatcggca
     2821 gcatgagcga catcacgatc agcatgggac tgcgacggaa gcgccggagc tcgcgttcga
     2881 tgatggccca agtgcgttgc atgagcatcc ctccttcagc gccggagcat ggggtggcga
     2941 tccgcgagcg acggctcctg cagagcgtcg cgcagctgcc gtccggtgaa gtgcacgaat
     3001 acgtcgtcga gggtcgtgga gttcacggag agggtctgca cggtgacgcc ggccgcgtgg
     3061 gtgagctcga gcagcgccat ggtcgtgccc ggcccgctcg aggacgtgac gcgcgcgaac
     3121 cggtcgtcgc cggagacggc atcgacgccc ggcagcgttc gcaggcgttc gagccagccg
     3181 gacggcgggc tcgcgaagcc cacatcgagc gtcactttgc cggcgagctc ggctttgagc
     3241 cggatcggtg aatcgagcgc tttcagcgtg ccgtggtcga cgatcgcgat gcgatcgcag
     3301 agcttgtcgg cttcatccat gtagtgcgtc gtgagcaaga ccgtgaggtc gcgctcggct
     3361 ttgatcttct tcagcatctc ccagacggcc gtgcgcgaca ccggatcgag ccccgtcgtc
     3421 ggctcgtcca agaagaagat gcgcggctcg tgcacgaggc cgcgcgcgat ttcgacgcgg
     3481 cgccgcatgc cgcccgacaa cttcttcacg ggtttgtcgg cccagctcgt gagctcgacc
     3541 gcggcgagca gctctcggat gagctccttt ctgcgcttgc gcggcacgcc gtagagcttc
     3601 gagaagatga gcaggttttc ctcggcgctg agctcgagat cgctcgtcat cgcttgcggg
     3661 atgacgccga tcgcgcgccg caccgtatcg ggatccccgg tgatgtcggc gccgccgacg
     3721 atcgccgtgc cctcggtcgg cggtacgagc gtcgtcagca tgcgaatcaa ggtcgatttg
     3781 ccggcaccgt tcgggccgag catgccgaaa atctcgcctt gtttcacctc gaacgagacg
     3841 tgatcgacgg ccgtgaacgt gccgaagcgc ttcgtgagcg agcggacctc gatggcgttc
     3901 atggggtgct cacgttccgg tcggcaagac gacgtaggcc gtcatgccga cggccaagcg
     3961 acggtcgtgg ttgtcgaggc ggagccg
//
LOCUS       DATIML010000196         6088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_619857, whole genome shotgun sequence.
ACCESSION   DATIML010000196 DATIML010000000
VERSION     DATIML010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6088
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_619857"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VLJ38_03420"
     CDS             <1..356
                     /locus_tag="VLJ38_03420"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSU38584.1"
                     /translation="GAEVFVDLDHAPLPEVDLIFDLIGGETLRRTCGMVRPGGTVVSA
                     VENPPVDVNRRGRFFVVEPSRPQLQELGKRVVAGELRPVVGATWPLRQGREAFEAKHR
                     GAQPGKAVLLVTEES"
     gene            complement(381..992)
                     /locus_tag="VLJ38_03425"
     CDS             complement(381..992)
                     /locus_tag="VLJ38_03425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38585.1"
                     /translation="MITHRASGGAGDSIVIALGGFGGTAAGGTGGANGHSPGNEAGAG
                     GEAADCGAVWGTPPSDPGYRGIRGTLNGQPLDIDGKDTSARIAFCLENGPGPVPDLNI
                     YFPLPGSSVNVDHGCEARVTSPNETTWHELETEISADVTEPTPNASDAWSDPSVLAWS
                     EQSGVASGTLRLHGQAGDGPFELIADFYLDVLEGAACTVPKVE"
     gene            complement(1322..1615)
                     /locus_tag="VLJ38_03430"
     CDS             complement(1322..1615)
                     /locus_tag="VLJ38_03430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38586.1"
                     /translation="MLGDDTEKVAAFMAFPLRVNGKTTRVVSSREQFVRERARILTPD
                     VVARVRDSDPGQVFCNSQGEMLGDGVLWAEVQANDRLAVWVINRGLAPTKRSP"
     gene            2234..2629
                     /locus_tag="VLJ38_03435"
     CDS             2234..2629
                     /locus_tag="VLJ38_03435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38587.1"
                     /translation="MSDDGAQSGGASSDGQRRLSLTWHRVRLLTATVLVFGPCAYLYA
                     NSRQRLGPGATAELLAVCWPFEIAAAFVAVLCMWRLKQAREAGALARAAARRYLVGSW
                     VVFLVALVVVIMTPFAFFFLFALSIGVAG"
     gene            2760..3212
                     /locus_tag="VLJ38_03440"
     CDS             2760..3212
                     /locus_tag="VLJ38_03440"
                     /inference="COORDINATES: protein motif:HMM:NF014144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HSU38588.1"
                     /translation="MTNKQKRIQRVVVHREKELDKRVSELGEARAAAERSEDAVAAER
                     ERVERAAAEREAMSERAMTAAEWRDANEWLESRKKSEALAAQELERANRQVVSKQGHV
                     LDARRALKGVELYETRLKQEELKVEDRADQRLQDELARSRAGHKRGKA"
     gene            3209..3769
                     /locus_tag="VLJ38_03445"
     CDS             3209..3769
                     /locus_tag="VLJ38_03445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38589.1"
                     /translation="MNGFDPVSRLTAAEIERETVERTEETERLAALFAQALPSALPDR
                     FGIVDESSDSWQRSVGNLTPPAAPTAAAVSTEASGTPSDTLVFTLRAGDLGVLKCMVD
                     RTESGVRVLIGADGQNALLAAGAERGALEAALRSAGLQVNSVAVVPLARFGTALARGA
                     GAQDGRDVRRAFTGSRERARRVKLIG"
     gene            3776..4474
                     /locus_tag="VLJ38_03450"
     CDS             3776..4474
                     /locus_tag="VLJ38_03450"
                     /inference="COORDINATES: protein motif:HMM:NF025230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
                     /protein_id="HSU38590.1"
                     /translation="MATNAVTGPGSTTALDALTNTGGTKPLDRTAFLKLLVEQLKHQD
                     PLKPQDDSAFVAQLAQFSSLEQSMSMNDKLDTLAAQNAGLANSQAVGLVGKLATVRGN
                     LVTVDGTGTGVPMAFSLGGNAASTTITIRNQSGAAVRTIDAGAHPDGITQLRWDGRDD
                     AGNVQPAGTYQVVVTAKDGGGNPVTVNQQTSGTVTDVSFDKGYPVLELDTGVSVPVSD
                     LLKVAVPQTPTTTK"
     gene            4515..5807
                     /locus_tag="VLJ38_03455"
     CDS             4515..5807
                     /locus_tag="VLJ38_03455"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HSU38591.1"
                     /translation="MVLNAMNSGVSGLMAEDQAIGVVGDNIANVNTTGFKSQRAIFQD
                     VLGHSILAGTSSALPGSGVRVGSVQQMFTQGALSNTGVSTDLALSGDGFFTVKGAVNG
                     LQGDFYTRAGNFNINKDGFVVNPQGLELQGYTANADGTYQASVSSLKVPTSALPAHAT
                     QNATITANLDASSAVPTVAFDVTDPANTSNYSTAMTVYDSLGQAHDVDVYFAKTSAGN
                     FDWHAVAKGDDLNPPQPGVNVELGTGSLGFTTDGALNTVTGNTFTADFGGATAGQVVT
                     IDFGTPISAGGTGLDGTTQYASPSNVSSQSQDGYSSGDFSGIAVDGQGVVTGMYTNGQ
                     QLAIGQLAIAKFRSNDGLGRAGQNLWIETRESGAVAFGTASSGGRGAVSAGALEGSNV
                     DLATEFVGLIQHQRSFSANSKTITTADEMLQELISIKR"
     gene            5891..>6088
                     /locus_tag="VLJ38_03460"
     CDS             5891..>6088
                     /locus_tag="VLJ38_03460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38592.1"
                     /translation="MGLVLATVVVVVLVTGAAVAGTMFGPVLLGHKQAKEDVADQADE
                     AGDDEPSPPDKTDKKKKSKSEK"
BASE COUNT         1038 a         2101 c         1999 g          950 t
ORIGIN      
        1 tgggggccga ggtcttcgtc gaccttgacc acgcgccgct ccccgaggtc gacctgatct
       61 tcgacctgat cggcggcgag acgctgcgcc ggacgtgcgg catggtcagg ccgggcggca
      121 ccgtcgtctc ggccgtcgag aacccacccg tggacgtgaa ccggcgcggc cggttcttcg
      181 tggtcgagcc gagccgcccg cagctccagg agctgggcaa gcgcgtcgtc gcgggcgagc
      241 tccgtcccgt ggtcggcgcg acgtggccac tcaggcaagg tcgcgaggcg ttcgaggcga
      301 agcatcgcgg tgcccagcca ggcaaggccg tcctcctcgt gaccgaggag agctgagctc
      361 ttgcagggca ccgtgagcgg tcactcgacc ttgggcacgg tgcatgccgc tccttcgagc
      421 acatccaaat aaaaatcggc aatgagctcg aacggcccgt cgccggcctg tccatggagc
      481 cgaagggtgc cgctcgcgac gccggactgt tcactccagg cgaggacgct cggatcactc
      541 cacgcgtcgc tcgcgttggg tgtcggctcc gtgacgtcgg ccgatatctc ggtctcgagc
      601 tcgtgccacg tcgtttcatt cggtgaagtg acgcgcgcct cacagccgtg atcgacgttg
      661 acgctcgacc cggggagcgg aaagtaaatg ttcagatcgg gtacggggcc agggccgttc
      721 tcgaggcaga acgcaatgcg agcactcgtg tccttaccgt cgatgtcgag cggttgcccg
      781 ttcaacgtgc cgcggatccc gcgatagccc ggatcgctcg ggggcgtccc ccaaaccgcg
      841 ccgcagtcag cggcttcgcc gcccgccccc gcttcatttc cgggcgagtg tccgttcgcg
      901 ccgccggtgc cccccgccgc cgtaccaccg aagccgccaa gcgcgatcac gatcgaatcg
      961 cccgctccgc cagaggcgcg atgggtaatc atcgattccg aaccgctcgt gccgccggac
     1021 tcgacggcgc tcgaaccacc ggtgcccggc gacgcgccag ccgcgctccc cgacgagcct
     1081 gcgctcgttc cagcgcgcgc cgttgtcgcc gagtcatcac gcgcccgacc gccgcacgcg
     1141 cccaggcaga tggcgcaggc caacgtcgtc accgttggga agcgctgacg cgtcacgtcc
     1201 attagcgtag ctcgtcagac ctccgacgcc taggcaacgc cgccgcaaac tcagttgccg
     1261 aagcgatggc cgccactctc cgccatgaaa tctggcgctc acgtcctcat gaggtcggga
     1321 gtcacgggct tcgctttgtg ggtgctaggc cgcgattgat cacccacacc gcgagacggt
     1381 cgttcgcctg cacctcggcc cagagcactc cgtcgccgag catctcgcct tgcgagttgc
     1441 agaagacctg ccccgggtcc gaatcccgca cgcgcgccac gacatccggc gtcaaaatcc
     1501 gagctcgctc gcgcacgaat tgctcgcgcg acgacacgac gcgagtcgtt ttgccgttca
     1561 cacgcagcgg gaacgccatg aacgcggcga ccttctccgt gtcgtcgccg agcattgcag
     1621 tgcggacctc cgcatagaac gaccggacgg cgtcgtagcc agcgtggggc ggaacacagg
     1681 ttgactctgc gagatgcctt ccgttcgcag cgaccaacag cacgcgctcg gagcctcgag
     1741 cgtccgtctc gacctgcgcg actccgccgt cgaacggcac ttctcgaacc gccggcgcag
     1801 gcgtcgcccg agtagtcgag ggctttgcta cggatgttgt agcggacaca acgggtttcg
     1861 cttggctcgc tcgggcgtca gagtcgttcc gaatgggctc tttcgcacag gcaaagcccg
     1921 tgattagcag cgccgtccaa cgcatgcgct agtttcgcac aaagcgctcg cgctctgcgc
     1981 cttgccgcgg ttccggaggc tgcgggctga gttgccccca cgcggtctcg cgccacacgg
     2041 cccgcgtcct cggctgcgcc tgcgggcggc gggcgccccc aagcgtcggc tccgccgccg
     2101 cgagggcgcc gcgaccacgt gcccttggtt gcgtttcgcg tccggcgccg gatcgcgtag
     2161 gtttggtgga gatgcggctg ctcgcagagc acgggctggc agaacgagtg gcggcctcac
     2221 gagggccgcg aacgtgagtg acgacggcgc gcagagcggc ggcgcgagca gcgatggcca
     2281 gcgtcgtctg tcgctcacct ggcaccgcgt tcggctcttg acggccacgg tgctcgtttt
     2341 cggtccctgc gcctaccttt acgccaattc gcgtcagcgc ctgggtcctg gtgccacggc
     2401 cgagctcttg gccgtgtgct ggcccttcga gatcgcggcg gcgttcgtcg cggtgctctg
     2461 catgtggcgg ctgaaacaag cgcgtgaagc cggcgcgctc gcgagagcgg ccgcgcgccg
     2521 ttacctcgtg gggtcgtggg tggtgttcct ggttgcgctc gtggtcgtca tcatgacgcc
     2581 gttcgcgttc ttctttctgt tcgcgctctc gatcggcgtc gcaggataga gcttcgccgt
     2641 acggctcgtc gcgacccggc gacgggcgct atgcgtcgag gtgcgcccct tgcgcaccgt
     2701 ggacccgtcc gtgctgagca tcgcgcttgc attggccaag cgcgaggcgc gggaagccca
     2761 tgaccaacaa gcagaagcgc attcagcgtg tggtcgtcca tcgcgaaaaa gagctcgata
     2821 agcgggtgag cgagctcggg gaggcgcgcg ccgccgccga gcgcagcgaa gacgccgtcg
     2881 cggccgaacg cgagcgagtc gagcgcgcgg ctgccgagcg cgaagcgatg tccgagcgcg
     2941 ccatgacggc ggcggagtgg cgcgacgcga acgagtggct cgaaagccgc aagaaatccg
     3001 aggccctcgc cgcgcaggag ctcgagcgcg cgaatcgcca ggtcgtctcg aaacaaggcc
     3061 acgtgctcga cgcacggcgc gcgctcaagg gcgtggagct ctacgaaacg cggctcaagc
     3121 aagaggagct gaaggtggag gaccgcgccg accaacggct gcaggacgag ctcgcacgca
     3181 gccgcgccgg ccacaaacga ggcaaagcgt gaacggcttc gatcccgtct cgcgcctcac
     3241 ggccgccgaa atcgagcgcg aaaccgtcga gcgcaccgag gaaacggagc ggctcgccgc
     3301 gctcttcgcg caggcgctac cgagcgcgct gcccgatcgc ttcgggatcg tcgacgagtc
     3361 gtcggattcc tggcagcgga gtgtcggcaa cttgacgccc ccggcggcgc cgacggccgc
     3421 ggccgtctcg accgaggcga gcggcacacc ttcggatacc ttggtcttta cgctgcgcgc
     3481 cggggatttg ggggtgctca agtgcatggt ggatcgcacg gaaagcggcg tacgcgttct
     3541 gattggcgct gacgggcaga acgcgctcct cgcggccggc gccgagcgcg gcgccctcga
     3601 agcggcgctg cgttcagcgg gcttgcaggt caattcggtg gcggtggtgc cgctcgcgcg
     3661 cttcggcacg gcacttgctc gaggggctgg tgcgcaagac ggacgtgacg ttcgtcgcgc
     3721 cttcacgggc tctcgcgaac gggcacgccg cgtgaagttg attggatgaa cccacatggc
     3781 gactaacgca gtcacgggtc cgggatcgac cacagcactc gacgcgctca cgaacacggg
     3841 cggcaccaag ccgctcgaca gaaccgcgtt cttgaagctg ctcgtcgagc agctcaaaca
     3901 ccaggatccg ctcaagcccc aggacgactc ggcgttcgtc gcgcagctcg cgcagttctc
     3961 gtcactcgaa caatcgatgt cgatgaacga caagctcgac acgctcgccg ctcagaacgc
     4021 gggcctcgcg aactcccagg cggtcggtct cgtgggcaag ctcgcgaccg tgcgcggtaa
     4081 cctcgtgacg gtcgacggca cgggcacggg cgtgccgatg gcgttctcgc tcggcggcaa
     4141 cgccgccagc acgacgatca cgatccgcaa ccaaagcggc gccgccgtgc gcaccatcga
     4201 cgcgggcgcg caccccgacg gcatcacgca gctccgctgg gacggccgcg acgacgcggg
     4261 caacgtgcag cccgccggca cgtatcaggt cgtcgtcacg gccaaggacg ggggcggcaa
     4321 tcccgtcacc gtcaaccagc aaacctccgg caccgtcacc gacgtgtcgt tcgacaaggg
     4381 ttatcccgtg ctcgagctcg acaccggcgt gtccgtacca gtctccgacc tgctcaaggt
     4441 cgcagttccg caaaccccaa ccacaaccaa gtaaccaacc caactctctc gtagagccct
     4501 aaaggagggc ccccatggtt ctcaatgcaa tgaactcagg tgtttcaggt ctcatggctg
     4561 aagaccaagc gatcggcgtc gtcggcgaca acatcgccaa cgtcaacacg accggcttca
     4621 agagccagcg cgccattttc caagacgtgc tcggtcactc gatcctcgcg ggcacttcct
     4681 cggctctgcc cggctccggc gtgcgcgtcg gcagcgtcca gcagatgttc acgcaaggcg
     4741 cgctttcgaa cacgggggtc tcgacggacc tcgcgctctc gggcgatggc tttttcaccg
     4801 tcaagggcgc cgtcaacggt ctgcaaggcg acttctacac ccgcgccggt aacttcaaca
     4861 tcaacaagga cggcttcgtc gtcaatcccc agggcctaga gctccagggt tacacggcga
     4921 acgccgacgg cacctaccag gcgtccgtct cgtcactcaa ggtcccgacc tccgcgctgc
     4981 ccgcgcatgc gacgcagaac gcgacgatca cggcgaacct cgacgcgtcg agcgccgtcc
     5041 ccacggttgc gttcgacgtg accgacccgg cgaacacctc gaactactcg acggccatga
     5101 ccgtctacga ttcgctcggt caagcccacg acgtcgacgt gtacttcgcg aagacctcgg
     5161 ccggtaactt cgactggcac gccgtggcca agggcgacga cctgaacccg ccgcaaccgg
     5221 gcgtcaacgt cgagctcggc accggctcgc tcggcttcac gaccgacggc gcgctcaaca
     5281 ccgtcacggg caacaccttc accgccgatt tcggtggtgc caccgcgggc caggtcgtga
     5341 cgatcgactt cggcacgccg atctcggcgg gcggcaccgg cctcgacggc acgacgcagt
     5401 acgcgtcgcc gtcgaacgtc tcgagccaat cccaagacgg ctattcctcg ggcgacttct
     5461 cgggcatcgc ggtcgacggt cagggcgtcg tgacgggcat gtacacgaac ggccagcagc
     5521 tcgcgatcgg tcagctcgcg atcgcgaagt tccgctcgaa cgacggcctc ggccgcgccg
     5581 ggcagaacct ctggatcgag acgcgcgaga gcggcgcggt cgcgttcggc accgcgtcga
     5641 gcggcggccg tggcgcggtc tcggccggcg cgctcgaagg ctcgaacgtc gatctcgcga
     5701 ccgagttcgt cggtctgatc caacaccagc gctcgttctc cgccaactcg aagaccatca
     5761 ccacggccga cgagatgttg caggagctca tcagcatcaa gcgctgagcg taggaccggc
     5821 tcggagggtg tgattgatgt ccgaggataa cgagaacgct tccgagccga aagctccgaa
     5881 aaagagcagg ttgggactgg ttttagccac cgtcgtcgtc gtggtgttgg ttaccggcgc
     5941 ggcggtggct ggaacgatgt tcggtcccgt gctcttgggg cacaagcaag cgaaggagga
     6001 cgtcgccgat caagccgatg aggcaggcga cgacgagcct tccccgcccg acaaaaccga
     6061 caagaagaaa aagagcaagt ccgagaag
//
LOCUS       DATIML010000197         2558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4662904, whole genome shotgun sequence.
ACCESSION   DATIML010000197 DATIML010000000
VERSION     DATIML010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4662904"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..885)
                     /locus_tag="VLJ38_03465"
     CDS             complement(7..885)
                     /locus_tag="VLJ38_03465"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU38593.1"
                     /translation="MSIVETLRARASVLVFVGVALGVASYEWHQAKSATLPVAPKPKT
                     AASVAVLAEGRLVAYPDAEVTLGAETGGKLVKLLVHERDRVERGDVIAEIDVAEERAA
                     LNEAWARVKESEPDITYLEQERSRSEHLFGQNAVARAAYDKSIHDVESASRHRASLLA
                     TSTRLKAQVDKATVRAPIAGTVTTRFVEMGAYVAPGAPIVTLVDLARLRVQAEIGEFD
                     AARVALGAKVTLRAEGYAPTWRGSVEEIQDEVVARQMKPLDPSRPVDTRVLLVKIRLD
                     EPVPLRLGQRVEVEIR"
     gene            complement(916..1587)
                     /locus_tag="VLJ38_03470"
     CDS             complement(916..1587)
                     /locus_tag="VLJ38_03470"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38594.1"
                     /translation="MFTVVAEDVTKTFREGRETVAVLKGASLHVEAGEVVALEGPSGS
                     GKTTFLSILGCLLSATSGHVAIAGEKVDQARPSACQAVRRRHIGFVFQQFNLFPALTA
                     AENVEYALNLKGVDGAAAKTQARLLLERVGMADRMGFLPRDLSGGQKQRVAIARALVA
                     SPSVILADEPTANLDASVATQVLELFTELARREQRSLLIVTHDPRVRHVADRVVGIAD
                     GRIAA"
     gene            complement(1611..>2558)
                     /locus_tag="VLJ38_03475"
     CDS             complement(1611..>2558)
                     /locus_tag="VLJ38_03475"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSU38595.1"
                     /translation="NSPNLDFVHQFPESNLYRARSVPGVARADNLILSFMQVALPTGA
                     EETTIVYAMQDFSRWGVPWELATGSLEGLESGSFVAFDESASKRFGPFEVGDYREVNG
                     QRFRVVGKTRGAKSFTTTPLAFMDFHRAQELQPGILSGKTSYIVVKLAPGADVSIVKA
                     ELERRLPYNDVYTAKAWAERSRDYWVANTGIGFNAFLTVFLGCLVGVVVVAQTLYTST
                     MEHLKEFGTVKAIGGSNLDIYRMLGQQASVAAVVGFALGYVPAQLLKPVIASAGLKLI
                     IRPELTAVVFAGTVVLCLLSAIVSFRKVKNIDPALVFRT"
BASE COUNT          419 a          865 c          850 g          424 t
ORIGIN      
        1 acgccctcag cgaatctcga cctcgacacg ctggccgagc cggagcggca cgggttcgtc
       61 gagtcggatc ttcacgagta agacgcgcgt atcgacggga cgcgaggggt cgagcggctt
      121 catttggcgc gcgacgacct cgtcctggat ttcctcgacg ctgccgcgcc aggtcggggc
      181 gtagccttcg gcgcgcagcg tcaccttggc gccgagcgcg acgcgcgcgg cgtcgaactc
      241 gccgatctcg gcttgcacgc gcaggcgcgc gagatccacg agcgtgacga tgggcgcccc
      301 cggcgccacg taagcgccca tttcgacgaa gcgcgtcgtc accgtgccgg cgatcggggc
      361 gcgcacggtc gctttgtcga cctgcgcttt gaggcgggtc gaggtggcga gcagcgatgc
      421 gcggtgccgc gaggcgctct ccacgtcgtg gatgctcttg tcgtaggcgg cgcgcgcgac
      481 ggcattttgc ccgaagaggt gctcgctgcg gctccgctcc tgctcgaggt acgtgatgtc
      541 cggctccgat tccttcacgc gcgcccaggc ttcgttcagc gccgcgcgct cttcggccac
      601 gtcgatttcg gcgatcacgt cgccgcgttc gacgcggtcg cgctcgtgca cgaggagctt
      661 cacgagcttg ccgccagttt cggctcccag cgtgacctcg gcgtccgggt aagcgacgag
      721 ccgcccttcg gcgagcacgg cgaccgaggc ggccgttttc ggcttgggcg cgacgggcag
      781 cgtcgcgctt ttggcctggt gccactcgta gctggcgacg cccagggcga cgccgacgaa
      841 aaccaaaaca ctcgcgcgcg ctctcagggt ttcgacgatg ctcatgttgc ctccgtgaat
      901 gccgttcgcc gccgctcagg cggcgatgcg tccgtccgcg ataccgacca cgcgatcagc
      961 cacgtgccgc acgcgcggat cgtgcgtcac gatcaaaagt gaacgctgct ctcggcgcgc
     1021 gagctccgtg aacagctcga gcacctgcgt cgcgacgctc gcgtcgaggt tcgccgtcgg
     1081 ctcgtccgcc aagatcaccg agggtgacgc gacgagcgct cgcgcgatcg cgacgcgctg
     1141 cttttgcccg cccgaaagat cgcgcggtaa aaaccccatc cggtcggcca tgcccactcg
     1201 ctcgagtagg agtcgggcct gcgttttggc cgcggcgccg tccacgccct tcaggttgag
     1261 cgcgtactcg acgttttccg cggccgtcaa tgcggggaac agattgaact gctgaaagac
     1321 gaagccgatg tgccgcctcc gcacggcctg gcacgccgac ggtcgcgctt gatccacctt
     1381 ttcgcccgcg atggcgacgt ggccgctcgt cgcggacagc agacagccga ggatcgacaa
     1441 gaacgtcgtc ttgcccgaac ccgacggacc ctcgagcgcg acgacctcgc ccgcttccac
     1501 gtgcaggctc gcgcccttga gcaccgccac ggtctcgcga ccctcgcgga aagtcttggt
     1561 cacgtcttcg gcgacgacgg taaacatggt cagtcctcga gttcagagcg tcaggtgcga
     1621 aacacgagcg ccgggtcgat gtttttgact ttccggaacg acacgatcgc cgagagcagg
     1681 cagagcacga cggtgcccgc gaagacgacg gccgtgagct ccggccggat gatgagcttg
     1741 agccccgcgc tggcgatgac cggcttcagg agctgtgccg gcacgtaacc gagcgcgaag
     1801 ccgacgacgg cggcgacgga cgcctgctgc ccgagcatgc gataaatgtc gaggttcgag
     1861 ccgccgatgg ccttcacggt gccgaactcc ttcaagtgct ccatcgtcga ggtgtagagc
     1921 gtttgcgcca cgaccacgac gccgacgagg cagcccagaa acaccgttaa aaacgcattg
     1981 aagccgatgc ccgtgttggc gacccagtag tcccgcgagc gctcggccca tgccttggcg
     2041 gtgtagacgt cgttgtacgg caagcggcgc tcgagctcgg ctttgacgat cgaaacgtcg
     2101 gcccccggcg cgagcttgac gacgatgtac gacgtcttgc ccgaaagtat gccgggctgg
     2161 agctcctggg cgcggtggaa gtccatgaac gcgaggggcg tcgtggtgaa gctcttcgcg
     2221 ccgcgcgtct tgccgacgac gcgaaagcgc tggccgttca cttcgcggta gtcaccgacc
     2281 tcgaacggtc cgaagcgctt gctcgccgac tcgtcgaacg cgacgaacga accgctctcg
     2341 aggccctcga gcgagcccgt cgcgagctcc cacggcacgc cccagcggct gaaatcctgc
     2401 atggcgtaca cgatcgtcgt ctcttcggcg cccgtcggca gcgcgacctg catgaacgac
     2461 agaatcagat tgtcggcgcg agccacgccc ggcaccgagc gtgcacggta gaggttcgac
     2521 tcgggaaact gatgcacgaa gtcgaggttc ggcgaatt
//
LOCUS       DATIML010000198         7761 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5239752, whole genome shotgun sequence.
ACCESSION   DATIML010000198 DATIML010000000
VERSION     DATIML010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7761
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5239752"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(285..764)
                     /locus_tag="VLJ38_03480"
     CDS             complement(285..764)
                     /locus_tag="VLJ38_03480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38596.1"
                     /translation="MTGRPSVNKRQRELLRKERQADKHVKRDERRAKRNEEPGESPPE
                     GELIEGLEGLEPAAPGAEPAAPGAEPAAPGAEPAAPGTEPAAPGVAARPVVAAPLAAP
                     PVVAAPVAAPPVVAAPVAAPPVVAAPVAAPPVVPAPVAAPPVVAAPPVVPARARATK"
     gene            1241..2209
                     /locus_tag="VLJ38_03485"
     CDS             1241..2209
                     /locus_tag="VLJ38_03485"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSU38597.1"
                     /translation="MLNVQRILCAVQLRLDEIEVLSHACAIASPFHARVDALLVRPDE
                     VRPSRSDGARAQLTPELDASHEAELLFATLLSGKDTIRVKGRVVSSDPHAILAQSAEC
                     NSDLIVVAARRTLASQEQRPALSDELGRSTGCPILTVPLASGASSVTRILLPVDFSPA
                     TARAVEWATLLAHRFSATVRVLHAVGSAALRSEPPRHGETVQTSFTRAHAMIEEVEQR
                     LRQNGVTCETTIAEQGTTHAILACREREESDLIVMGMHPHENERTASSGMVSSIRRRA
                     TVPVLSIMTPEAEDRMTLSDPVRDNVTWMHRPAPSAGMRHAVASAS"
     gene            2206..2529
                     /locus_tag="VLJ38_03490"
     CDS             2206..2529
                     /locus_tag="VLJ38_03490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38598.1"
                     /translation="MTTQSEESLRARITVQFRESSNMTYELDCAGTALVLRIFFPTDA
                     GEWRIVAQATTAPDAPSTGSKASSRVEALRALARSCRELDGSPALARIDWSAVEQAMV
                     KVRAV"
     gene            complement(2567..3157)
                     /locus_tag="VLJ38_03495"
     CDS             complement(2567..3157)
                     /locus_tag="VLJ38_03495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38599.1"
                     /translation="MAAGAEAEPRFTVGAYGGYLFGTSLEGTSSTLTSRASIESAVDY
                     GAVVDVAIRPFAFVELSYTHAPTELSLQQSDGAAYRYDLLVQYVQLGGLLVYPAPGAK
                     WLRPIFGGTLGASVYSADSEGFRYTEWRFSMMFEGGVEIQPIDYFGIRLQARLGATFL
                     TDNSALFCASGAGCALAYSGTAVLQPELAAGAYVAF"
     gene            complement(3317..4675)
                     /locus_tag="VLJ38_03500"
     CDS             complement(3317..4675)
                     /locus_tag="VLJ38_03500"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU38600.1"
                     /translation="MVPELSGPERGQSARRLRLAVYGVLAENAGSGAGAFPVLLSALL
                     ERGHRVEFFGNPVYVRPRSLERFAGYRFHPLHVEAIDRLWYRTERFELARTIVSQLGH
                     AAYAREAIRQIEREHEREPYDLIFATDVQPLWPSRLPVLSWPQSPPQTEAAALRTPAL
                     ARELLKINGPGNYAVIQAFYVYRLLTAQLALRCSDVYLCGSHWARDEWERFGAAPEQL
                     EPFPYPIDIRPFASVPLLVPRSAPTFLWLGRSTPRKRLDLFIEGFLELRQRYPEVRAR
                     IVGNVAAHPFGRAVLERHGHVPGLSVEPAIARESVPELFADIDVLVQPSQNENFGFSV
                     AEALAAGRAVVAGPTNGTLEYAGRAGFGFSEYSASSVADAMERALQAIRLDGAGVSRS
                     ARQAAQQFEVDGVTERFAAQCEKLIDRRARTGAPRCHERLTNVLLQRRKSHERAVIFA
                     DS"
     gene            4886..5650
                     /locus_tag="VLJ38_03505"
     CDS             4886..5650
                     /locus_tag="VLJ38_03505"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HSU38601.1"
                     /translation="MNAKPGAYQSQHGEDAWLEGYFGHKTSGFYVEVGAYDGKVISNT
                     YYFEQLGWTGALVEPHPEKAAACRANRPRSRVFECAAVSSPELESIELMDVPGGEVYS
                     TVVANDFNLERLRKFGLESRSIRVPCRTLDSILDEMRPQSIDFVSIDVEGAEIEVLRG
                     FDIARWRPQLVLVESPPERLDNVRDYFVARGYAYRRSIDVNDIYEALPASLPWRDRPI
                     LAATLDHVRYRTCKALTRVRASTRVRTRLRARGLWP"
     gene            5656..6720
                     /locus_tag="VLJ38_03510"
     CDS             5656..6720
                     /locus_tag="VLJ38_03510"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSU38602.1"
                     /translation="MGAPSAGPENKHVAGLDTVRFICATWVLFGHFGFLPLPDGIDRL
                     PHVGRIARVFVGNLFSGPAAVIVFFLVSGFCIHYPYRHGRLPAMKPFYARRYVRILIP
                     MAVAIALGVPLELGLTNLNESILWSLLCEEIYYLLYPLVLVRLRRHMSFRPMIAVAFV
                     LALGVALTNPRAGNYASYGAGLNWLLGLPCWLLGCELADSVSTLRAPSIGRLWTYRLG
                     IWGLSAICSLLRFHSPLRYPWTLNWFALAAFFWLGAEIAYQERHGSIVALERAGKWSY
                     ALYLTHLHGHYLFLALAARFLAFGLPHLTPMLHWLFAMTFTYLLAYAFYRAVEKPAHE
                     LARRVAQRMRERTPIAVSAE"
     gene            6722..7339
                     /locus_tag="VLJ38_03515"
     CDS             6722..7339
                     /locus_tag="VLJ38_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38603.1"
                     /translation="MSAPAPSTIMLLSPAKLSGQRGRSLLRSEAAFPLAKRLRSREGA
                     PLAEVFSFVSALYFRGKVSYARAFAASADGSPAAFVMTAGGGLCGLDEPVGLERLRGW
                     ASVSIDASNPHFTVPLLRQTSALLDAHAPTTRFVLLGSIASDKYVTPLLEIFGARLLF
                     PSEFLGRGDMSRGALLLKAVREGRELEYAEVRAARHSSDPPPDRL"
     gene            7354..>7761
                     /locus_tag="VLJ38_03520"
     CDS             7354..>7761
                     /locus_tag="VLJ38_03520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38604.1"
                     /translation="MLFLRRPTRLYWALFLSSALGALVVFYLRVSSVVRCWHWEITDG
                     REGPGIYAIWRLLHGYPLYEWPNRPPYSLTLYNFGFYYFYAAVMRLFGVKDEGLLGAP
                     RALTLLAAVLGAALFARLAWRYAPVRGTPGKLAF"
BASE COUNT         1246 a         2657 c         2507 g         1351 t
ORIGIN      
        1 cgtggcttcc gccgctcgcg cgagttccgt gctcgacgca gtgcggagtc cgcgcccgtc
       61 gagttcgacg cgcagatggc tgccgatcag cgcgcgcgct tctaccatcg tgccgggcca
      121 accgcccgca acgggtcgac cttgttcggc aagcgccgcg cacagcgagc gtacccaagc
      181 tgcaccgact gcagacgggc cgtgccggag aatcgcgccc cgtccctgcc gggcatcgct
      241 tcccggcggt tcccccgtaa attcggagct tgccatcggc tccgttactt cgtcgcccgc
      301 gcgcgcgcgg ggacgaccgg cggcgcggcg acgacgggcg gcgcagcaac cggcgcgggg
      361 acgaccggcg gcgcagcgac cggcgcggcg acgacgggcg gcgcagcaac cggcgcggcg
      421 acgacgggcg gcgcagcaac tggcgcggcg acgaccggcg gtgcagcaag tggcgcagcg
      481 acgactggac gtgcggcaac acccggcgct gcgggctcgg tgcccggcgc tgcaggctcg
      541 gcgcccggcg ctgcaggctc ggcgcccggc gctgcgggct cggcgcccgg cgctgcaggc
      601 tcgaggcctt cgaggccttc gatcagttcg ccttcggggg gcgactcgcc cggttcttca
      661 ttgcgcttgg cccgacgctc gtcgcgcttg acgtgcttgt ccgcttgtcg ttctttgcgt
      721 aggagctcac gctgtcgttt gttgacgctc ggtcgtccag tcatgccgcc tccagcgggg
      781 gatttcagtt ccgtcgccgg aacgggcgca ccggtcgctc ggacgcgaaa accgcggtca
      841 cgaataccgg ccggcagcgt tgacgccgcc tcacaggatc gtcggaaacg actttccgcg
      901 atcgctgggt gggcgacgga cagccaggcg gttaccgaaa acgctgtgtt gaagcaaagc
      961 tagcgccttc cacttagaag ggcaaacccg aaatcgaact tgaccgagtt ccgcccgagc
     1021 cgtatgttcc tcccggtcga tgtgcgccgg cgcaagggtt gcggcgcgca cgcaaagttg
     1081 actcgccgcg ccgctgagtt ccgcgctgcg ctttttgccg cgttgggcat tcgccgtcga
     1141 gtgttcgtcg aggcctggag gtttcgatga tcccagcgag ccgacatggc gtacccgccg
     1201 tcgaccgttt tcaaacggat ttcacgccgg gtggcgtagc gtgttgaacg tccaacgcat
     1261 cctatgcgcg gttcagttgc ggctcgacga aatcgaggtt ttgtcgcacg cctgcgcgat
     1321 cgcgagcccc tttcacgctc gcgtcgacgc gctcctcgtg cgccccgatg aagtacggcc
     1381 ttcgcgctcg gacggtgccc gagctcaatt gactccggag ctcgacgcga gccatgaggc
     1441 ggagttgctc tttgcaacgc tgctttccgg aaaggacacg atccgggtca aaggcagggt
     1501 cgtcagcagt gatccgcatg cgatcctcgc gcaatcggcg gaatgtaatt ccgacttgat
     1561 cgttgtcgcg gcgagacgca cgctggcaag tcaagagcag cgccccgcgc tcagtgacga
     1621 gctcggtcgt tccaccggat gccccatcct gacggttccg ctcgcgagcg gtgcctcttc
     1681 ggtcactcgc atcttgctgc ccgtggattt ttcgccggcg actgcgcgcg ccgtcgaatg
     1741 ggcgacactg ctcgcccatc ggttctcggc cacggttcgg gtgctgcatg ccgtcggctc
     1801 ggccgcgttg cgcagcgaac cgccgcgcca cggcgaaacc gtgcagacga gcttcacgcg
     1861 cgcgcacgcc atgatcgaag aggtcgagca gcgcttgcgc cagaacggcg tgacttgcga
     1921 gaccacgatc gccgagcaag ggacgacgca cgcgattctt gcctgccgtg aacgcgagga
     1981 gagcgacctc atcgtcatgg ggatgcaccc ccacgaaaac gaacgcacgg cctcgtccgg
     2041 catggtttcg tcgatcaggc gccgggcgac cgtgccggta ctctcgatca tgacgccaga
     2101 ggcggaggac cgcatgacac tcagcgaccc ggtccgcgac aacgtcactt ggatgcaccg
     2161 tccggcgccc agcgccggga tgcgtcacgc cgtcgcgagc gcatcatgac gacccaaagc
     2221 gaagagtcgc tacgagcgcg catcacggtc cagtttcgag agtcctcgaa catgacttac
     2281 gagctcgact gcgcgggtac cgctctcgtc ttacgcatct tcttcccgac cgatgcgggc
     2341 gagtggcgga tcgtcgccca agccaccacc gctcccgatg cgccgagcac cggttccaag
     2401 gcgtcctcgc gcgtcgaggc gctccgcgca ctcgcacgtt cttgtcgaga gctcgacggc
     2461 tcgccagctc tcgccagaat cgactggagc gccgtggaac aagccatggt gaaggttcga
     2521 gccgtctgac tgcccgacgg acccggcgac cccgcgacgg atctcgctag aaggcgacgt
     2581 acgcgccggc agcgagctcg ggctggagca ctgcggtccc cgaataagca agggcgcaac
     2641 cggcgccgga cgcgcagaag agcgcgctgt tgtcggtgag gaacgtcgcg ccgagccgtg
     2701 cctgcaggcg aatgccgaaa tagtcgatgg gttggatttc gacgccgccc tcgaacatca
     2761 tcgagaaacg ccactcggtg tagcgaaagc cttcgctgtc ggccgagtag acgctcgcgc
     2821 cgagcgtgcc gccgaagatg ggacgcagcc attttgcgcc cggagccgga taaacgagta
     2881 gtccgccgag ctgcacgtac tggacgagta gatcgtaacg gtaggcagcg ccgtcggatt
     2941 gctgcagcga gagctccgtg ggcgcgtgcg tataagaaag ctcgacgaat gcaaacgggc
     3001 gtatggctac gtcaaccacc gcgccgtaat cgacggcgct ctcgatggac gcgcggctcg
     3061 tcaacgtgct cgacgtaccc tcgaggctcg tcccgaacag gtaaccgccg taggcgccca
     3121 ccgtgaaccg cggctcggcc tcggccccag ccgccacggc gagcattccg caaagcaccg
     3181 acaagccgca aaaaaagctc ttcctcgtca cacttgctcc cgggtcgcgc ggcacactag
     3241 ctccgacctc gggcctcgtg gcaactaaag atcgcgcagc gtcgcgacca cgacggttcg
     3301 gcgccgacgc tccgactcaa gaatccgcga aaatcacggc gcgttcgtgc gattttcggc
     3361 gctgaagcaa gacgttcgtc aatcgttcgt ggcagcgcgg tgcgcccgtt cgcgctcgcc
     3421 gatcgatgag cttttcgcat tgcgcggcga aacgctccgt tacgccgtcg acctcgaatt
     3481 gttgagcggc ctggcgcgcg ctccgtgaaa cgccggcccc gtccaagcga atcgcctgca
     3541 gcgcgcgctc catggcgtcg gccaccgacg acgcggaata ctcggaaaag ccgaaacccg
     3601 cgcgaccggc gtattccagc gtgccgttcg tcggcccagc gacgacggca cggccggcgg
     3661 ccagcgcttc ggcgacggag aagccgaagt tttcattctg gctcggctgg acgagcacgt
     3721 cgatgtcggc aaagagctcg ggcaccgact cgcgcgcaat cgcgggctcg accgacaacc
     3781 cgggcacgtg cccgtgccgt tcgagtaccg cgcgcccgaa cggatgcgcg gcgacgttgc
     3841 cgacgatgcg cgcccgaact tcggggtacc gctgcctgag ctcgagaaat ccctcgatga
     3901 acagatcgag gcgcttgcgc ggcgtcgaac gcccgagcca caagaaggtc ggcgcggacc
     3961 ttggaacgag cagcggcacc gaagcgaaag gccggatgtc gatcgggtac gggaacggct
     4021 cgagttgctc cggcgcggcg ccgaagcgct cccactcgtc ccgtgcccag tggctgccac
     4081 aaagataaac gtccgagcag cgaagcgcga gctgcgcggt gagcagccgg taaacgtaga
     4141 acgcttggat cacggcgtag ttgcccggcc cgttgatctt caggagttcg cgcgcgagcg
     4201 cgggcgtccg taacgcggcc gcttcggtct gcggcggtga ctgtggccag gagaggacgg
     4261 gcagcctcga aggccagagc ggctgcacgt ccgtcgcgaa gatcaaatcg tagggctccc
     4321 gctcgtgctc acgctctatc tggcgaatcg cttcgcgcgc gtacgccgca tgccccagct
     4381 gcgacacgat cgtgcgcgct agctcgaagc gttcggttcg ataccagagg cgatcgatgg
     4441 cctcgacgtg gagggggtga aaccgatagc cggcaaagcg ctcgagcgaa cgcgggcgaa
     4501 cgtagaccgg attgccgaag aactcgacgc ggtgtccgcg ttcgagcagc gccgagagca
     4561 acacggggaa cgcgcctgcc ccactgccgg cattctcggc gagtacgccg tagacggcga
     4621 gtcgcaggcg gcgcgcgctc tgtccccgct cggggcctga aagctctggt accatcgaga
     4681 ccatttgagc gtggcgccag tgccgcgcaa gtcccatggc agccgagcgc gagcagcgct
     4741 ctccctgggt ggcaagaacc cccggtggac gcccttcgtc gaagatgtta gcgctccttc
     4801 taaccggcgc catacgtagc gctcaccgcg agcgcgcccg agcaacgccg ccaacgggcc
     4861 acgtgagatg tcagatcacc gttacgtgaa cgcgaagcct ggggcgtacc agtctcagca
     4921 cggcgaagat gcttggctcg aaggctactt cgggcacaag acgagcggct tttacgtcga
     4981 agtcggagcg tacgacggca aggtgatcag caacacctac tacttcgagc agctcggatg
     5041 gacgggcgcg ctcgtcgagc ctcaccccga aaaggccgcg gcttgccgcg cgaatcgccc
     5101 gcgcagccgc gttttcgaat gcgctgccgt gtcgtccccc gagctcgaga gcatcgagct
     5161 catggacgtg ccaggcggtg aagtctactc cacggtcgtc gcgaacgact tcaacctcga
     5221 gcgcttgcgc aagttcgggc tcgagagccg cagcattcgc gtgccctgtc gcacgctcga
     5281 ctcgattctc gacgagatgc gcccgcagtc gatcgacttc gtttcgatcg acgtcgaggg
     5341 tgccgagatc gaggtcctgc gcggcttcga catcgcgcgc tggcggccgc agctcgtgct
     5401 cgtcgaaagt cccccggaac ggctcgacaa cgtccgcgac tacttcgtcg cgcgcggcta
     5461 cgcgtatcgg cggagcatcg acgtgaacga catttacgaa gcgctgccgg cgagcctgcc
     5521 ttggcgcgac cggccgatcc tcgccgcgac cctcgatcac gtccgttatc ggacatgtaa
     5581 ggcgctcacg cgcgtccgcg cgagcacgcg agtgcgcacg cggctgcgtg cccgaggcct
     5641 ctggccgtga ccgccatggg ggcgccgtcc gccggccccg agaacaagca cgtcgctggg
     5701 ctcgacacgg tccgcttcat ttgtgccacg tgggtgctgt tcgggcattt cggcttcttg
     5761 cccttaccgg acggcatcga ccgcctcccc cacgtaggcc gcatcgcgcg cgtgttcgtc
     5821 ggcaatctgt tctcgggccc cgcggcagtc atcgtttttt tcttggtttc tggtttctgt
     5881 attcactacc cctaccggca cgggcgactg cccgccatga agccgttcta tgcgcgccgc
     5941 tacgtccgca tcctgatccc gatggccgtc gccatcgcgc tcggcgttcc actcgagctc
     6001 ggactcacga atctgaacga gtcgatcctg tggagtctgt tgtgcgagga gatctactac
     6061 ctcctctacc cgctcgtgct cgtgcgcctg cgacgtcaca tgagctttcg accgatgata
     6121 gccgtcgcgt tcgtgctcgc cctcggcgtc gccctgacca acccgcgcgc gggcaattac
     6181 gcgtcctacg gggcggggct caattggcta ctcggcctgc cttgttggct gctcgggtgt
     6241 gagctcgccg actcggtttc gacgctgcgt gccccgagca tcgggcggct ctggacgtac
     6301 cgtctcggaa tctggggcct cagcgcgatc tgcagcttgc tccgcttcca ctcgccgctt
     6361 cgctacccgt ggacgctcaa ttggttcgcg ctcgccgcgt ttttctggct cggcgccgag
     6421 atcgcctatc aagaacggca cggcagcatc gtcgccctcg agcgcgccgg taagtggagt
     6481 tacgcgctct acctgaccca cttacacggt cattatctgt tcttggcgct cgccgcgcgc
     6541 tttctcgcgt tcggcttgcc ccacctcacc ccgatgcttc actggctctt cgccatgacg
     6601 ttcacgtacc tgctcgcgta cgcgttctat cgcgccgtcg agaagccggc gcacgagctg
     6661 gcccgcaggg tcgcgcaacg tatgcgcgag cggaccccga ttgcggtctc ggccgagtag
     6721 gttgtccgcc cccgcccctt cgaccatcat gctgctctcg cccgcaaaat tgagcgggca
     6781 gcgcggacgc tcactcctcc gcagcgaagc cgcatttccg ctcgccaagc gcctgcgttc
     6841 gcgcgagggc gcgccgctcg ccgaagtgtt cagcttcgtg agcgcgctct actttcgcgg
     6901 caaggtgagt tacgcgcgcg ccttcgccgc gagcgccgac ggttctccgg cggcgttcgt
     6961 catgaccgcg ggcggcggct tgtgtgggct cgacgagccc gtggggctcg agcggctgcg
     7021 cggctgggcg tcggtgtcca tcgacgcctc aaatccccac tttaccgtac cgcttctgcg
     7081 ccagaccagc gcgctcttgg acgcgcacgc cccaacgacg cgcttcgtgc ttctcggcag
     7141 catcgcgagc gacaaatacg tcacgccctt gctcgagatc ttcggcgctc gcctgttgtt
     7201 tcccagcgag tttttgggcc gcggcgacat gagccgcggt gccctcttgc tcaaggccgt
     7261 acgcgaaggc agggagctcg agtacgccga agtacgggcc gcgcgccact cttccgatcc
     7321 acccccggac cggctctgat acgagggcat cgcatgctct tcttgcggcg cccgacccgt
     7381 ctctattggg ccctcttcct gagttcggcg ctcggagcac tcgtcgtatt ttatcttcgc
     7441 gtctcgtcgg tcgtgcgctg ctggcactgg gagatcaccg acggccgcga aggacctggc
     7501 atctacgcga tctggcgcct gcttcacggc tacccgctct acgagtggcc gaatcggccg
     7561 ccttacagcc tgactctgta taacttcggg ttctactact tttacgctgc ggtcatgcgg
     7621 ctcttcggcg tgaaggacga gggactgctc ggggcgccac gcgcactcac gctgctcgcg
     7681 gccgtgctcg gagcggctct cttcgcgcgt ctcgcctgga ggtacgcacc ggtgcgtgga
     7741 acgcccggga agctcgcgtt c
//
LOCUS       DATIML010000199         2266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_41898, whole genome shotgun sequence.
ACCESSION   DATIML010000199 DATIML010000000
VERSION     DATIML010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41898"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..966)
                     /locus_tag="VLJ38_03525"
     CDS             complement(43..966)
                     /locus_tag="VLJ38_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HSU38605.1"
                     /translation="MPASSLLIIGSMAFDDLDLPSGEFRDVVGGSATYSAFAASHFTE
                     PRVVAVVGDDFPEPMLGDLARCGVDVSGIERARGKTFRWWGRYAKDLVSRTTLDTQLN
                     VFADFKPKLPEAWRDGEFLFLGNIHPTLQLDVLTQVKKPRLVAMDTMNFWIEGEPAAL
                     AKVLERVDLLVINDEEARLLSKEHNLPRAARAIRAMGPKTVIVKRGESGALLFHEHGV
                     FAAPAYPLERVVDPTGAGDTFAGGFMGYLARVRDVGPQAVRRAMFYGSVMASFCVEDY
                     SLDRLRTLSDGEIEGRYRAFRDLTHFEDVRL"
     gene            complement(974..1624)
                     /gene="gmk"
                     /locus_tag="VLJ38_03530"
     CDS             complement(974..1624)
                     /gene="gmk"
                     /locus_tag="VLJ38_03530"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HSU38606.1"
                     /translation="MSNDDPLLLIVSSPSGAGKTTLASRLLAKVTGLVFSVSHTTRRP
                     RATELDGREYHFVDRPSFEQLIVHDAFLEWAEVHDNLYGTSRAEVERARGARGILFDV
                     DHQGARQIKSVRPDAVAIFILPPSMSVLKQRLQGRASEDQATVERRFRVARSEIAHYG
                     LFDYVLMNDDLDRATERLISIVLAEECRRGRAARVAEQLLAETHGFGGTVPPHAKE"
     gene            complement(1614..>2266)
                     /locus_tag="VLJ38_03535"
     CDS             complement(1614..>2266)
                     /locus_tag="VLJ38_03535"
                     /inference="COORDINATES: protein motif:HMM:NF019940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1732 domain-containing protein"
                     /protein_id="HSU38607.1"
                     /translation="PARFSMERARSLHRALGALRDELAPGTELPLATLASFSSLLLEP
                     VVADIDSVRQALARALAKALDSLNAMREAEGAALGREIGERLATAKGLTQAIRERSGG
                     LVALQRTRLKERLERLLAGSAPLDATRLENEVALMADRSDISEEMLRLESHFEQFGGL
                     LQAAEPVGRQLDFLLQEIARELNTTGAKSQDATLAQLVVQTKVEVERMREQVQNVE"
BASE COUNT          358 a          773 c          777 g          358 t
ORIGIN      
        1 cctaactccc ccctcccgcc gcttttaggc gcagtagttc aatcagaggc ggacgtcttc
       61 gaagtgggtc aggtcgcgga aggcgcggta gcggccttcg atctcgccgt cggagagggt
      121 gcgcaggcga tcgagcgagt agtcctcgac gcagaagctg gccatgacgc tgccgtagaa
      181 catcgcgcgc cgcaccgcct gcggcccgac gtcgcgcacg cgcgccaggt agcccatgaa
      241 gccgccggca aaggtgtcgc ccgcgcccgt cggatcgacg acgcgctcga gcggataggc
      301 cggcgccgcg aacacgccgt gctcgtggaa cagaagcgcg cccgactcgc cgcgcttgac
      361 gatcaccgtc ttcggcccca tcgcgcggat ggcgcgggcc gcgcgcggca ggttgtgctc
      421 cttcgacagg aggcgcgcct cttcgtcgtt gatgacgagg aggtcgacgc gctcgaggac
      481 cttggccagc gccgccggct cgccctcgat ccagaagttc atcgtgtcca tcgcgaccag
      541 gcgcggcttt ttgacctgcg tcagcacgtc gagctgcagc gtcggatgga tgttgccgag
      601 gaagaggaac tcgccgtcgc gccacgcctc gggcagcttc ggcttgaagt cggcgaacac
      661 gttgagctga gtgtcgagtg tcgtgcggct cacgaggtct ttcgcgtagc gtccccacca
      721 gcggaacgtc ttgccgcgcg cgcgctcgat gccgctcacg tcgacgccgc agcgcgccag
      781 atcgccgagc atcggctccg ggaagtcgtc gcccacgacc gcgacgacgc gcggctcggt
      841 gaagtggctc gccgcgaacg cagagtacgt cgccgagcca ccgactacgt ctcgaaactc
      901 gccgctcggc aggtcgagat cgtcgaacgc catcgaaccg atgattagaa gggaggaagc
      961 gggcatggcc ggatcattct ttcgcgtggg gcggcaccgt gccaccgaaa ccgtgagttt
     1021 cagccagaag ttgctcggcg acgcgcgcgg cgcggccgcg ccggcactct tcggcgagga
     1081 cgatcgagat gagccgctcc gtggctcgat cgaggtcgtc gttcatgagc acgtaatcga
     1141 agaggccata atgcgcgatc tcgctgcgcg ccacgcggaa acggcgctcg acggtcgcct
     1201 gatcctcgct cgcgcggccc tgcagccgtt gcttcagcac gctcatgctg ggcggcagga
     1261 tgaagatcgc gacggcgtcg gggcgtacgc tcttgatctg gcgagcgccc tgatgatcga
     1321 cgtcgaacag gatgccgcgg gcgccgcgcg cgcgttcgac ctcggcgcgg ctcgtgccgt
     1381 aaaggttgtc gtgcacctcg gcccactcga ggaacgcgtc gtggacgatg agctgttcga
     1441 agctcggccg atcgacgaag tgatactcac ggccgtcgag ctcggtcgcg cgcgggcgcc
     1501 gcgtggtgtg cgaaacactg aagacgagac cggtcacctt ggcgagcagc cggctcgcga
     1561 gcgtcgtttt accggcgccc gacggcgacg acacgatcaa gagcagcggg tcgtcattcg
     1621 acattttgca cctgctcgcg catgcgctcg acctcgacct tcgtttgcac gacgagctgc
     1681 gcgagcgtcg cgtcctgact cttggcgccg gtcgtgttga gctcgcgcgc gatttcctgc
     1741 agcaagaagt cgagctggcg gcccacgggc tcggcggcct gcaagagccc gccgaactgc
     1801 tcgaagtgac tctcgagccg cagcatctcc tcgctgatgt ccgagcgatc cgccatcagg
     1861 gcgacctcgt tttcgagacg cgtcgcgtcg agcggcgcgc tgccggcgag cagccgctcg
     1921 agccgctcct tcaagcgcgt ccgctgcaga gcgaccaggc cccccgaacg ctcgcggatg
     1981 gcttgcgtga gacccttggc cgtcgcgagc cgctcgccga tttcgcgccc gagcgcggcg
     2041 ccctctgcct cgcgcatcgc attgagcgag tcgagcgcct tggcgagcgc tcgcgcgagc
     2101 gcctgccgca cgctgtcgat gtcggcgacg acgggctcga gcagcagcga cgaaaagctc
     2161 gcgagcgtcg cgagcgggag ctccgtcccc ggtgcgagct cgtccctcag cgcgccgagc
     2221 gcccggtgca gcgaacgcgc ccgttccatc gaaaaacggg cgggag
//
LOCUS       DATIML010000200         4096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_42087, whole genome shotgun sequence.
ACCESSION   DATIML010000200 DATIML010000000
VERSION     DATIML010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42087"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..949
                     /locus_tag="VLJ38_03540"
     CDS             <1..949
                     /locus_tag="VLJ38_03540"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSU38608.1"
                     /translation="TAYAIAVEECAKVDGSLALTIASHNGLGTGHLLTFGNEEQKRRY
                     LPRAVSGEALAAWALTEPGSGSDAAALRTTARREGGDWILDGTKMFITQGSIGGFCVV
                     LARSSADAPPQRGITAFIVDTSTPGYLASKKIKKYGCRWSDTVEVTLDAVRVSDAERL
                     GEVDQGFLDTMRILDTGRISIAAMALGLGRGALDMAVAYAKERAAFGRPIAEFQAMQW
                     MLADAKTQLDAAELLVYRAAWLADRGERYTQEASIAKLFASEAATRVCNDAMQIHGGY
                     GFTREFEIEKHLRDVKLCEIGEGTSQVQRMVIAKHILRA"
     gene            complement(994..1524)
                     /locus_tag="VLJ38_03545"
     CDS             complement(994..1524)
                     /locus_tag="VLJ38_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSU38609.1"
                     /translation="MHAGPVVGTLLTAFALTLGGCVVTTYEGAGEPPRVPAPPERPKD
                     ANAAAAGKIGSDDDESFAEAPAKNEDKVAARHLLVQYKGSMRAGPQIVRTREEARQRA
                     EEALARAKAGEDFAALVKEYSDEPGAGERGGDLGRFGRKQMVKAFADAAFGLEVGQIS
                     DVVETPFGFHVIQRTE"
     gene            complement(1533..2414)
                     /locus_tag="VLJ38_03550"
     CDS             complement(1533..2414)
                     /locus_tag="VLJ38_03550"
                     /inference="COORDINATES: protein motif:HMM:NF025002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSU38610.1"
                     /translation="MTDDEKNKVTSLPPPPTDEIDDEWGSSGTAASKPRNERASAKAK
                     TKAVSAQPAPSGERRHATDQDDEEEDDDEDEDELDEEEDDEEEDDDEDEEEEESHSNS
                     RRAVTKSAAPAARDWLPDWAPWATLGLLLAVGFLGGVGVLPVNFNLTKAAAEPASSGV
                     AAAVTATAKPNASGARMPAPVGSAAMERVSASHLLVQYKGALRAAPTITRTKEEAKQR
                     AEEALAKARKGVPFDKLVAEYSDEPGAAARGGKLGSFPRTAMVKPFADAAFALKPGQI
                     SGLVETQFGYHVILRTE"
     gene            complement(2411..3268)
                     /locus_tag="VLJ38_03555"
     CDS             complement(2411..3268)
                     /locus_tag="VLJ38_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HSU38611.1"
                     /translation="MSLDLSTIGQRTAPFVFEYDWKTVVLYALGVGMTRDDLDFLYEG
                     RGPRVLPTFAVVPSYPAIAALFEQTRCDMTRLVHGNQLIRLHAPIPPAGRLETVGAVK
                     GIYDMKKLAQVVLTTSTTFEGKPCFDTEWSLLVRDAGGFGGQRPPKSEAPKIPDRPAD
                     FQVELPTSPEQALLYRLSGDLNPLHADPAFAAAAGFPQGPILHGLCTFGLVGRAVLKA
                     LCAGDERRLVTLGAQFRRPFWPGETLRTTGYVLESGRVALEAFAGDKAEPVITSAWAD
                     ISPPRGLKA"
     gene            3425..>4096
                     /locus_tag="VLJ38_03560"
     CDS             3425..>4096
                     /locus_tag="VLJ38_03560"
                     /inference="COORDINATES: protein motif:HMM:NF013478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HSU38612.1"
                     /translation="MGIPADWLALLRQALGDDPLVWALAWARALPVLVLVPAFGLGGL
                     ALPIRVALALGMAGCVAPALRVLPVAGMPWWLALAREGLASLPLALGTAAILWAAVMA
                     GGLADNLRGGRESAELPVLDEAASPFGVLFGLLVALGFLESGGAGRVAAALAEPRLHG
                     SFAVAVERLSESVGIAVSVAAPLVVGSVLIELAAAFIARAAAPVQVTSLVAPLRSLGL
                     LFVVWV"
BASE COUNT          563 a         1385 c         1400 g          748 t
ORIGIN      
        1 gaccgcctac gccatcgccg tcgaagaatg cgccaaggtg gacggctcgc tcgcgctcac
       61 gatcgcgagt cacaacgggc tcggcacggg ccatttgctt acgttcggaa acgaagagca
      121 gaagcgccgc tacctgccac gcgcggtcag tggcgaagcg ctcgcggcgt gggcgctgac
      181 cgagcccggc tccggctccg acgcggccgc cctgcgcacg accgcgcggc gcgagggggg
      241 cgattggatc ctcgacggga ccaagatgtt catcacgcaa ggctcgatcg gcggattttg
      301 cgtcgtgctc gcgcgcagct cggcggacgc gccgccgcag cgtgggatca ccgcgttcat
      361 cgtcgatacg agcacgcccg gctacctcgc gagcaagaag atcaagaagt acggctgccg
      421 ctggagcgac accgtcgaag tcacgctcga cgccgtgcgc gtcagcgacg ccgagcgcct
      481 cggggaggtc gatcaaggct ttctcgacac gatgcgcatc ctcgacacgg ggcgcatctc
      541 gatcgcggcc atggcgctcg gcctcggccg cggcgcgctc gacatggcgg tcgcgtacgc
      601 caaggagcgc gcggcgttcg ggcgccccat cgcggaattt caagcgatgc agtggatgct
      661 cgccgacgcg aagacgcagc tcgacgcggc cgagctcctc gtttaccgcg ccgcctggct
      721 cgcggaccgc ggcgagcgct acacgcaaga agcatccatc gcgaaactct tcgcgagcga
      781 ggcggccacg cgcgtctgca acgacgccat gcagatccac ggcggctacg gcttcacgcg
      841 cgagttcgag atcgaaaagc acctgcgcga cgtgaagctc tgcgaaatcg gcgaaggcac
      901 gagccaagtg caacgcatgg tgatcgctaa acatattctg cgcgcctgac gcgttcccca
      961 tcaggcctcg gcggggcagg ccgtaacgcg cgcttactcg gtccgttgga tcacgtgaaa
     1021 tccaaacgga gtctcgacca cgtccgagat ctgtcccacc tcgagcccga acgccgcgtc
     1081 ggcgaaggcc ttcaccattt gctttcgccc gaagcgacct agatccccgc cacgctcccc
     1141 cgcgccgggc tcatcggagt actccttcac gagcgcggcg aaatcttcgc ccgccttcgc
     1201 tcgggcgagc gcttcctcgg cgcgctggcg cgcttcttca cgcgtccgca cgatctgcgg
     1261 cccggcgcgc atcgacccct tgtactgcac gagcaggtga cgcgcggcga ccttgtcctc
     1321 gtttttggcc ggtgcttcgg cgaagctttc gtcgtcgtcg ctcccgatct ttccggctgc
     1381 ggcggcgttc gcgtccttgg ggcgttcggg tggagccggc acgcgcggcg gctcgccggc
     1441 gccttcataa gtcgtgacga cgcagccgcc gagcgtgagc gcgaacgccg tcaatagcgt
     1501 cccaacgacg gggcccgcgt gcatgcgtct gctcactccg tgcgcaagat cacgtggtag
     1561 ccgaactgcg tctcgaccaa gcccgagatt tgacccggct tgagcgcgaa cgccgcgtcg
     1621 gcgaagggct tgaccatcgc cgtgcgcgga aagctgccga gcttgccgcc gcgagccgct
     1681 gcaccgggct cgtccgagta ttcggcgacg agcttgtcga agggcacgcc tttgcgcgcc
     1741 ttggcgagtg cttcttcggc gcgctgtttc gcttcttctt tggttcgcgt gatggtcggc
     1801 gccgcgcgca gtgcgccctt atactggacg agcaagtggg acgcagagac gcgctccatc
     1861 gcggccgagc ccaccggcgc cggcatgcgc gcgccggaag cgttcggttt cgcggtggcc
     1921 gtcactgcgg ccgctactcc gctcgacgcg ggctcggccg cggccttggt caaattgaaa
     1981 ttgacgggta gaacgccgac gccgcccaaa aagcccacgg cgaggagcag gccgagcgtc
     2041 gcccagggcg cccagtcggg cagccaatcc cgcgcggcgg gcgccgcact cttcgttacg
     2101 gcgcggcgcg agttcgagtg agattcctcc tcttcttcgt cctcgtcgtc gtcttcttct
     2161 tcgtcgtctt cttcttcgtc gagctcgtcc tcgtcctcgt cgtcgtcttc ttcttcgtcg
     2221 tcctggtcgg tggcatgacg gcgctcgccg ctcggcgcag gttgtgcgct cacggccttc
     2281 gtctttgctt tcgccgaggc ccgttcgttg cgtggcttgg aagcggcggt cccgctgctg
     2341 ccccactcgt cgtcgatctc gtcggtgggc ggcggaggca gcgaggtgac cttgttcttt
     2401 tcgtcgtcgg tcatgctttg agtcctcgag gcggggagat atcggcccag gcgctcgtga
     2461 tcacgggttc ggccttgtcg cccgcgaacg cttccagggc gacgcgcccg ctctctagca
     2521 cgtagccggt cgtgcgtagg gtctcgcccg gccaaaacgg ccggcgaaat tgtgcgccga
     2581 gcgttacgag ccgccgctcg tcgccggcgc acagcgcctt gagtacggcg cggcccacga
     2641 gcccgaacgt gcaaagcccg tgcaaaatcg gtccttgcgg gaagcctgcc gcggccgcaa
     2701 acgccggatc ggcgtggagc gggttcagat cgccggagag acgatagagg agcgcttgct
     2761 ccggcgaggt cggcagctcg acctgaaaat cagccggtcg gtcggggatt ttgggcgcct
     2821 ctgatttcgg ggggcgttgc cctccaaatc cgcccgcgtc gcgcacgagc agtgaccact
     2881 cggtgtcgaa gcagggcttg ccctcgaagg tcgtgctcgt cgtgagcacc acctgcgcga
     2941 gcttcttcat gtcgtagatg cctttgactg cccccaccgt ttcgagccgt ccggcgggtg
     3001 ggatcggcgc gtgcagtcgg atcagctgat tgccgtggac gagccgcgtc atatcgcaac
     3061 gcgtctgttc gaacagcgcc gcaatcgcgg ggtagctcgg aacgacggcg aacgtcggca
     3121 ggacgcgggg gccgcgtccc tcgtaaagaa aatccaagtc gtcgcgcgtc atgcccacgc
     3181 cgagcgcgta gagcacgacc gttttccaat cgtattcgaa tacgaacggg gccgttcgct
     3241 ggccgatcgt ggataggtcg agactcatcc tcacctagcg cttcgcgggg gcccctcgtt
     3301 agcgcgccga cgccggaggc gtcaatggag cgcctcggct aaggcgagct tggagttcca
     3361 agactgctcg agtcgagggc cgcgacgccg cgcggctttg cggctatctt ggcgccttcg
     3421 gacgatgggg atacccgccg attggcttgc tctcctgcgt caggctctcg gcgacgatcc
     3481 gctcgtgtgg gcgctcgcct gggcacgcgc gctgccggtg ctcgtgctcg ttccggcttt
     3541 cgggctcggg ggcttggctc ttccgatccg cgtggcgctg gcgctcggga tggcgggctg
     3601 cgtggcgccc gctttgcgtg tgctcccggt ggcggggatg ccgtggtggc tcgcgctcgc
     3661 gcgggaaggc ctcgcgagcc tgccgctcgc gctcggtacg gcggcaatct tgtgggctgc
     3721 ggtcatggcg ggcgggctcg cggacaattt gcgcggcggg cgcgagtctg cagagctccc
     3781 ggtgctcgat gaagcggcgt cgccgttcgg tgtgctcttc gggttgctcg tggcgctcgg
     3841 ttttctcgaa tccggcgggg cgggccgcgt tgccgcggcg ctcgccgaac cacgccttca
     3901 cggtagcttc gccgtggccg tcgaacggtt gtccgaatcg gtgggcattg ccgtcagcgt
     3961 ggcggcgccg ctggtcgtcg gctccgtgct gatcgagctc gcggcggcgt tcatcgcccg
     4021 cgcggccgcg cccgttcagg tgacgtcgct cgtcgcgccc ctgcgctcgc tcggactatt
     4081 gttcgtcgtc tgggtc
//
LOCUS       DATIML010000201         3067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1197284, whole genome shotgun sequence.
ACCESSION   DATIML010000201 DATIML010000000
VERSION     DATIML010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1197284"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VLJ38_03565"
     CDS             complement(<1..446)
                     /locus_tag="VLJ38_03565"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HSU38613.1"
                     /translation="MTASRLVVRTQKKPLHGSVPVPSDRSITHRALILAALSNGPCEL
                     RGFGYGSDNLRMLGALAALGVRYEDDGRGTLKLRGVGLGGLVAPSAPIDCGRSPTCLR
                     LLTGVLAAQPFASRLEGHGALEHLRMHGVLDPLRARGARLSGRPVPA"
     gene            complement(463..1443)
                     /locus_tag="VLJ38_03570"
     CDS             complement(463..1443)
                     /locus_tag="VLJ38_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38614.1"
                     /translation="MRGWSRRRLLGAALGTLGALACAHKPDVVVKTGEDKKLTEAQID
                     ADPVPLLPGDAIGVLSIDAQALYNSQFGDRVRAVVEKRLPLPPSAGFDPKRDLDHAWI
                     GFYSMQGADIAGVAVGHFDRQKIEAAADGTQPTALGVPVVKTSYAGRTLYTAGTVGFS
                     VLTAKTALVGNDTGMRRALDRIQEGRARRQLPEYMEKLLASTKAPIVGGFDFTSSPLP
                     DATRQELAFLKGVKTLALVGNFDEPGLNVAGTLTYEDADAAQRGAQNLIALRQLVERY
                     APFLALLGIAQPVRRLEAEPKDKDVAFVLAVDGAAVAALLDRAQAMFLSH"
     gene            complement(1443..2522)
                     /gene="hisC"
                     /locus_tag="VLJ38_03575"
     CDS             complement(1443..2522)
                     /gene="hisC"
                     /locus_tag="VLJ38_03575"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HSU38615.1"
                     /translation="MSLVIPSIEALVPYEGGKPVEELERELGIAGAVKLASNENPLGP
                     SPRALEAARATLAQVHRYPDGVAFALRDAIARFHGVRREEVLQGAGSNELLDLVVRTF
                     ATREHHVVFGEPAFIVYRLASLAYGVPFTAVPLKNLVHDLPAMAAAVTPKTRVVFVAN
                     PNNPTGTYVGRAAVEQFLRAVPPEVIVVMDEAYFEYADAADYPSSLALRHLRERLLVM
                     RTFSKAYGLAGLRVGYAIGPASLIDYMNRVRAPFNTSVPGQAAAVAALDDQAHVEESR
                     RMNQAERARLTQALEGMGLSVAPSQANFILVDLARPARLVYDRLLERGVIVRPFGNLP
                     TSLRVTCGLPRENDRFLAALAEVLV"
     gene            complement(2641..>3067)
                     /locus_tag="VLJ38_03580"
     CDS             complement(2641..>3067)
                     /locus_tag="VLJ38_03580"
                     /inference="COORDINATES: protein motif:HMM:NF013962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSU38616.1"
                     /translation="VAAELARDEPNAAALVTERVGRAATLETVRANVGDEPDLKLRYG
                     FASARPAMRSGNDVTCLLFSVDDQPGSLFGVLRHFAERGVNLRKLQSRPVPHGSWDYV
                     FYVELGAHVTERPVTTALEALKRTTKYLKVLGSFPVASA"
BASE COUNT          519 a         1035 c         1057 g          456 t
ORIGIN      
        1 gcgggcacgg gacggcccga cagccgtgcg ccgcgtgcgc gcagcgggtc gagcacgccg
       61 tgcatgcgca agtgctcgag cgcgccgtgc ccttcgagcc gcgaagcaaa aggctgcgcg
      121 gcgagcacac ccgtgaggag ccgcaagcac gtcggcgagc gaccacaatc gatcggcgcg
      181 ctcggtgcga ccaggccgcc aagcccgacg ccccggagct tcagcgtgcc gcgcccgtcg
      241 tcctcgtagc gcaccccgag cgccgcgagc gcgccgagca tgcgcaaatt gtcgctgccg
      301 tagccgaagc cacgtagctc acacgggccg ttcgagagcg ccgccagaat gagcgcgcgg
      361 tgcgtgatgc tgcgatcgct cggcaccggc acgctgccgt gcaacggctt cttttgggtg
      421 cgaacgacga ggcgcgacgc ggtcatcgga gaggagacgg gttcaatggg agagaaacat
      481 agcttgggcc cggtcgagca acgcagccac tgcggcgccg tcgaccgcca acacgaacgc
      541 cacgtctttg tctttcggct cggcttcgag ccggcgcacg ggctgcgcga tgccgaggag
      601 cgcgagaaag ggcgcgtagc gttcgacgag ctgacgcagc gcgatcaggt tctgtgcgcc
      661 ccgctgcgcg gcgtcggcat cctcgtacgt cagcgtcccg gccacgttca agcccggctc
      721 gtcgaagtta ccgaccagcg cgagcgtttt gacccccttc aagaaggcga gctcttgacg
      781 cgtcgcatcc ggcaaggggc tcgacgtgaa atcgaaaccg ccgacgatgg gcgccttcgt
      841 cgacgccaag agcttctcca tgtactcggg cagctgccgg cgtgccctgc cctcttggat
      901 gcggtcgagt gcgcggcgca tgccggtgtc gttgccgacg agcgccgtct tggccgtgag
      961 cacgctgaag ccgaccgtac cggccgtgta cagcgtgcgt ccggcgtagc tcgtcttcac
     1021 gacgggaaca ccgagcgccg tcggctgcgt gccgtccgcc gcggcctcga tcttctgccg
     1081 atcgaagtga ccgacggcca cgccggctat gtccgcgccc tgcatcgaat aaaatccgat
     1141 ccacgcgtgg tcgagatcgc gcttcgggtc gaaacccgct gaaggcggta gggggagacg
     1201 tttttcgacg accgcgcgca cgcgatcgcc gaactgtgaa ttgtagagcg cttgcgcgtc
     1261 gatcgagagc acgccgatgg catcgccggg caagagcggc accggatcgg catcgatctg
     1321 tgcctccgtg agcttcttgt cctcaccggt tttgacgacg acgtctggtt tgtgcgcgca
     1381 cgcgagcgcg ccgagcgttc cgagagccgc gccgagcagg cggcgccgtg accagccccg
     1441 catcagacga gtacctcggc gagcgcggcg aggaagcggt cgttttcacg tggcagcccg
     1501 caggtgacgc gcagactggt cggcaaattc ccgaagggtc gcacgatgac gccacgctcg
     1561 agcaagcggt cgtaaacgag gcgcgccggg cgcgcgagat ccacgaggat gaaatttgcc
     1621 tgactgggcg ccacggagag ccccataccc tcgagcgcct gcgtgagccg cgcgcgctcg
     1681 gcctggttca tgcgccggct ctcctccacg tgggcctgat cgtcgagcgc cgccacggcc
     1741 gccgcctgcc caggaacgct cgtgttgaac ggcgcccgca cgcgattcat gtagtcgatg
     1801 agggacgctg gaccgatggc atagcccacg cgcaagcctg cgagcccgta agccttcgaa
     1861 aacgtgcgca tcacgagcag ccgctcgcgc aaatgtcgca gcgcgagcga gctcggatag
     1921 tcggccgcgt cggcgtactc gaaatacgcc tcgtccatca cgacgatcac ctcgggcggc
     1981 accgcgcgca aaaactgctc cacggcggcg cgcccgacgt acgtccccgt cgggttattc
     2041 gggttcgcca cgaacacgac gcgcgtcttc ggcgtcacgg ccgcggccat ggcgggcaaa
     2101 tcgtgcacca ggttcttgag cggcacggcc gtgaacggca cgccgtaagc gagcgacgcg
     2161 aggcgataca cgatgaacgc aggctcaccg aatacgacgt ggtgctcgcg cgtcgcgaac
     2221 gtgcgcacga cgagatccaa gagctcgttc gagccggcgc cctgcagcac ttcttcgcgg
     2281 cgcacgccgt ggaaacgcgc aatcgcgtcg cgcaacgcga aggcgacgcc gtccggataa
     2341 cgatggactt gagcgagcgt cgcgcgagcg gcttcgagcg cgcgcggact cggaccgagc
     2401 ggattctcgt tcgaggcgag cttgaccgcg ccagcgatcc cgagctcgcg ctcgagctct
     2461 tcgacgggct tgccgccttc gtacggcacc agcgcttcga tggatggaat gacgagagac
     2521 atggctagtg atggcggcgt cggcgcaccc gacctccgcg gccggctagc cttgcccgct
     2581 gcccgggtcg cggtcaaccc gcacgcgcgc gtgcgtgggc acgtcgctcg cgggctcgat
     2641 tcaggccgaa gcgaccggga acgagcccaa gactttcagg tacttcgtgg tgcgcttcag
     2701 ggcttcgagc gcggtcgtga ctggacgttc ggtgacgtgc gcgccgagct cgacgtaaaa
     2761 aacgtagtcc caactaccgt ggggcacggg ccgggattgg agcttgcgca gattcacgcc
     2821 gcgttcggca aagtgccgga gcacgccgaa gagcgagccc ggctgatcgt cgacgctgaa
     2881 gagcaggcac gtcacgtcgt tgcccgaacg catggcaggg cgcgcactcg cgaagccgta
     2941 acggagcttc aagtccggtt catcgccgac gttggcgcgc accgtctcga gcgtggcggc
     3001 gcgcccgacg cgttcggtca cgagcgcggc ggcgttcggc tcgtcgcgcg cgagctcggc
     3061 cgcgacg
//
LOCUS       DATIML010000202         2714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2350643, whole genome shotgun sequence.
ACCESSION   DATIML010000202 DATIML010000000
VERSION     DATIML010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2350643"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1317..>2714
                     /locus_tag="VLJ38_03585"
     CDS             1317..>2714
                     /locus_tag="VLJ38_03585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38617.1"
                     /translation="MVIGATLALLCGPVLVDLAVSGRSRPFGYAAPDAFYYLTIARNL
                     ARHGLPAFDGEHATNGFHPLWQFSLGLVAFATEHLGVERYTLLVAVLLGLALTASGVA
                     LLGAALTERKTLTPAFALLPVGVYGFLLAPFYLPRLKQLTAESAEGTLPVYGTLWSYV
                     NGMESGAVLASFGLVAWTWRTFMRARTQRNALAFGLSLAALTLSRLDHVLIALPIGLA
                     FYLSARALGGRREGLVAATAFAVPVGAYALTNQLVFGSFMPVSGAMKTSFPLPTSIHV
                     QYVLDVLHAGAAYDLSKLLCESFVFVPALFALGYLACTLELALLGPTLVVRYRASARE
                     YERFLVPAALGILLLAFYNGCFVIDGPSHWYLPVSTTFVSLAVIALLARRPRWLSRLA
                     NAAALLAIGVASLVFFVKLHRHLDYHARYADFFWRDAPKLKARFGKHPPRLVEFDDGI
                     VNYALDVRAMSSGLAL"
BASE COUNT          376 a          971 c          850 g          517 t
ORIGIN      
        1 aaggtagccg tctggctcga cggcaagctc atcttacttc acgcggccgc cgctcccggc
       61 gagcgcgcga gcttcgccgt cgatgcggga ggcatcgagc ttcgcggcat gcagctgggt
      121 tgcgcggacc cggcgaacca ttaagggaat ttgccgctta attcggctgc tctgcggtcg
      181 ggctcagtcg cagcagtacc cgtcgataca acgctgcgct ccggggcact ggcagtcaca
      241 ggtgcacgcg atgccaggtt cagtttgagg cgcgccggcc tgcccggcct cgctcggcgc
      301 ttcgccggcg gtactggccg aaggctcaca ggaggccccc gccgcagccg gcgttccccc
      361 cgatcccgag tgcgtgccgc cagcgccgct cgcgctcgtc atgccagccg agcctgacac
      421 tggagcactg ccgccagtac catgcgacgc gcctcccctg ccgtagccgc catgcatgga
      481 cgacgatcca gcttgccccg ccgacgcgct cgacgccgac gaaccaccgg tgcccgccgt
      541 cacgccgttc cccgacgcgg ctccgctgga agtctgacct ggagcaccag gcgcaccgcc
      601 gccgcccgct gtcgcgctcc cgcccgtccc cgacgtgtcc ggcgagcagc gtccttcgac
      661 ggcatcttcg cagcggctct gcgggatgca cgcgcagagc tcggccgttt gctgtggcag
      721 ccgcgcgaat cgatccttac acgcggcgac gcagctcgac aggtcccgtg cctgcgaggc
      781 cccgcagacg ctcagtcgat cgcaatattc gacgcacagg gtgtcttcgt tgtacgtgcg
      841 gctgccgttg ccgtacgtgg taccggaatt cgtggtgccg cccgtgtagt ccacgtactc
      901 gtaacgcggt tggtcgtggc acgtctccca actgggatcg cagtcttcga ccatgcatcc
      961 cgttgcagcc gccccgatcg acaacgccaa cattactcca gccacgattc gcgacattcg
     1021 agcctcctct ggcacccgac ggtgcccact cgccgtttag cgcttcaatt cgcgcgcgcc
     1081 agcgagaatt cgttcggctg cgcgcactga attccttcag tcgtacggaa aggacggcgc
     1141 cgacgcccgc ttccaggagc cgtcacggga acgaggagct tccgcaacgg aaccgtcttg
     1201 caaccgtctc gaatcgcttg cgtattcgag ctcgcgcgac atagttgcct cgcatggtgg
     1261 tggcagtgga ttcagctgaa ggcgcgcctg cgcgtacgcg tacgctttcc tcgaatgtgg
     1321 tcatcggcgc gacgctcgcc ctgctctgcg ggccggtgct ggtagacctc gcggtttcgg
     1381 gtcgctcgcg cccattcggg tacgccgcgc cggacgcctt ctactacctg acgatcgcgc
     1441 gcaaccttgc gcggcacggc ctcccagcgt tcgacggcga gcatgccacc aacggctttc
     1501 acccgctctg gcagttctcg ctcgggctgg tcgcgttcgc gaccgagcac ctgggcgtcg
     1561 agcgctacac gctactcgtt gccgtcctcc tcggcctggc gctcaccgcg agcggcgtgg
     1621 cgctgctggg ggcggcgctc accgaacgaa agacgctgac gcccgcgttc gcgctcctgc
     1681 cggtcggggt ttacggcttt ttgctggcgc ccttttacct gcctcgcttg aagcaactca
     1741 ctgccgagag cgcggagggc acgctccccg tctacggaac gctctggagc tacgtgaacg
     1801 ggatggagag cggggccgtg ctcgcgagct tcggactcgt cgcctggacg tggcgcacgt
     1861 tcatgcgcgc gaggacacag cggaacgcgc tcgcgttcgg gctgtcgctc gccgcgctca
     1921 cgctgtcgcg actggatcac gtgctcatcg cactgccgat cggcttggct ttctatctgt
     1981 ccgctcgggc gctcggcgga cgccgtgagg ggctcgtggc agcgacggca ttcgcggtgc
     2041 cggtcggcgc gtacgcgttg acgaatcagc tcgtgttcgg gagtttcatg cccgtgagcg
     2101 gcgccatgaa gacgtcgttc ccgctgccga ccagcatcca cgttcagtac gtcctcgacg
     2161 ttttgcacgc cggagctgct tacgacctgt cgaagctcct gtgcgaatcg ttcgtgttcg
     2221 tgccagcgct atttgcgctc ggctacctcg cctgcacgct ggagctcgcg ctgctcgggc
     2281 cgacactcgt cgtgcgctat cgcgcgtcgg ctcgcgagta cgagcgcttc ctcgtgccgg
     2341 ccgcgctcgg aatactactg ctcgccttct acaacggctg cttcgtcatc gacggcccgt
     2401 cgcactggta cctgcccgtg tccacgacgt tcgtgtccct cgccgtcatc gcgctcctcg
     2461 cgcgccgccc gcgttggctc agccgattgg caaacgcggc ggcgctcctg gcgatcggcg
     2521 tcgcgtcgct cgtgttcttc gtcaagctgc accgacacct ggactatcac gccagatacg
     2581 ccgatttttt ttggcgcgac gcaccgaagc tcaaggctcg cttcggcaag cacccgccgc
     2641 gcctcgtcga gttcgacgac ggcatcgtca actatgccct cgacgtgcgg gcgatgtcgt
     2701 caggattggc tctc
//
LOCUS       DATIML010000203         1825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_907918, whole genome shotgun sequence.
ACCESSION   DATIML010000203 DATIML010000000
VERSION     DATIML010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_907918"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1385)
                     /locus_tag="VLJ38_03590"
     CDS             complement(<1..1385)
                     /locus_tag="VLJ38_03590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HSU38618.1"
                     /translation="MTQIRRPSDQEDELTRRRFLELVSASAALATGCSPYRPEKILPY
                     TESPRDVTPGVSAYYATSLLIDGFATGLVATTREGRPLKIEGNPAHPSSLGATGVWHQ
                     ASVLELYDPDRGRAVTKGGLPASWDALERFLQSPVADDGHKLRLLLEPTSSPLVHALL
                     AQVKQRFPASKVTFYAPTPGQVTGAAARALFGAPLAPHPDLSRADVIVALDADFLASQ
                     DLRLARGFAERRRVHGSDGVMNRVYAVEPGVSVTGSLADARLARPARRVSLIAAALLD
                     ALKRRQDLPTDALVRLTGALDDEERRFVRALARDLTSRAPGATVVLAGERQPAEVHVL
                     AYALNLALGNLGSTLSFTEQAVPETAGDQELPALAGEMRAGAVDALLVLAGNPAYDAP
                     ADLEWTQAMRAVPVTLFAGLYANETARAATWYAPLAHPFETWGDGRAYDGTWSLVQPL
                     IMPLHDARSAT"
     gene            complement(1407..>1825)
                     /locus_tag="VLJ38_03595"
     CDS             complement(1407..>1825)
                     /locus_tag="VLJ38_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HSU38619.1"
                     /translation="SSTAGIPATELCMGCHAQIWNQSEKLAPVRASFFDDVPIRWNRV
                     HDLPDFVYFNHSVHVHAGVECAQCHGDVASMPLVAKKESFTMGFCLDCHRNPEARVRN
                     YHLRTRHAVSTTDNLLAHAGARVVDNPLITCTTCHR"
BASE COUNT          293 a          620 c          630 g          282 t
ORIGIN      
        1 tccgtcgcgc tccgagcgtc atgcaggggc atgatgagcg gctgcacgag cgaccaggtg
       61 ccgtcgtaag cgcgaccatc gccccacgtt tcgaagggat gcgcgagcgg cgcgtaccaa
      121 gtcgcggcac gcgcggtctc gttggcgtag agccccgcga acagcgtgac cggcaccgct
      181 cgcatcgctt gcgtccactc gagatcggcg ggcgcgtcgt aagcggggtt gccggctagg
      241 acgagcagcg cgtccaccgc acccgcgcgc atttctcccg cgagcgccgg cagctcctgg
      301 tcgccggccg tctcgggcac ggcttgctca gtgaagctca gggtggagcc gagattgccg
      361 agcgccaggt tcagcgcgta cgcgagcacg tgcacttccg ccggctgtcg ctcacccgcg
      421 agcacgacgg tcgcgcctgg ggcgcgtgac gtgaggtctc tcgcgagcgc ccgaacgaaa
      481 cgccgctcct cgtcatcgag cgctcccgtg agccgaacga gcgcgtcggt gggcagatcc
      541 tggcgccttt tgagcgcatc gagcaacgcc gccgcgatca acgagacgcg acgagcagga
      601 cgcgcgagcc gtgcgtccgc gagcgagccc gtgacgctca cgcccggttc gacggcgtaa
      661 acacggttca tcacgccgtc gctcccgtgc acgcgccgtc gctcggcaaa cccgcgcgcg
      721 agccgcaagt cttgggacgc caggaaatcc gcgtcgagcg cgacgatcac gtccgcgcgc
      781 gacaagtccg ggtgcggcgc gagcggcgca ccgaacagcg cgcgcgccgc ggcgcccgtg
      841 acttgtcccg gcgtgggcgc gtaaaacgtg accttgctcg ccggaaagcg ctgcttcacc
      901 tgggccaaga gcgcgtgcac gagcggtgag ctcgtcggct cgagcagcag gcgcagcttg
      961 tgtccgtcat ctgcaacggg gctctgcaag aaccgttcga gcgcgtccca gctcgcgggc
     1021 aatccgccct tcgtcaccgc gcggccgcga tccgggtcgt agagctcgag cacgctcgcc
     1081 tggtgccaga cgcccgtcgc gccgaggctc gagggatgcg ccggattgcc ttcgattttc
     1141 agcggccgcc cctcgcgcgt cgtcgcgacg agacccgtcg cgaaaccgtc gatgaggagc
     1201 gaggtcgcgt agtacgcgga aacgcccggc gtcacgtcgc gcggactctc cgtgtacggc
     1261 aggatctttt cgggccggta gggggaacag ccagtcgcga gggccgcgct cgcgctgacg
     1321 agctcgagaa agcgccggcg cgtaagctcg tcctcttggt cgctcgggcg cctgatctgg
     1381 gtcaactgct ctggcatctc gacccctcag cggtggcacg tggtgcaggt gatgagtgga
     1441 ttgtcgacga cccgagcgcc ggcgtgcgcg agcaggttgt ctgtcgtcga aactgcgtgc
     1501 cgagtgcgca ggtgatagtt ccgcacgcgc gcctcgggat tgcggtggca atccaggcaa
     1561 aatcccatgg tgaaagattc cttcttcgcc acgagcggca tgctcgcaac gtcgccgtgg
     1621 cactgcgcgc actcgacccc cgcgtgcaca tgcactgaat ggttgaagta aacgaagtcg
     1681 ggcaagtcgt ggacccggtt ccagcgaatc ggcacgtcgt cgaagaaact cgcgcgcacg
     1741 ggagcgagct tctcgctctg gttccaaatc tgcgcgtggc agcccatgca cagctcggtg
     1801 gccggaattc ccgcagtcga cgagc
//
LOCUS       DATIML010000204         2339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1774774, whole genome shotgun sequence.
ACCESSION   DATIML010000204 DATIML010000000
VERSION     DATIML010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774774"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2328)
                     /locus_tag="VLJ38_03600"
     CDS             complement(<1..2328)
                     /locus_tag="VLJ38_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38620.1"
                     /translation="MQLDGVRHPAARTGAVRAKLDAHGTVAAPVLKANVFARSLEVQG
                     RKFETADIAFNGTPAKADVGLVLTNARGQGLKSHALLKTAPGKTEIIGPSLAFRDRDG
                     TLQLSAERVALTGPALDVEHFVLDGAGHAAGTLHLRGKNIDVEAQTQELDLGRLSKVA
                     GVESPVHSARATLDLRYSGPLNGEGKGKVHGEISQIGYDRVTGGWTSLNLELGDHGVS
                     GMVETELVRGAKVVIGVDDIVPAALANGKSWAPDGRVRVRGKLDLESMAPLAGRVDAI
                     PIEHAKGTVELDLAYARDSDDALPEIKAHVQTHDLTLIGRREPRNEIGTPNEAMQAAP
                     AVYRGIDVGLDLALDERNPQIAVRTTLYDKHGTLLELDATAGPWLNENIQQIIAGLRQ
                     APLEVKASMPARSFWSLPQPIRPLSVRGQIAGDAKFTGTIADPHLVLDVRASRLASAG
                     ERIVGEKQPSVAVVGHVEYAPDGGKLELIAQRDKAKAVDVDASWSGNAMLAASDPKER
                     DRLKVKLDAVLDRLELETIPALKNRQIEGVLSGIVHADYAADKRMLAVDLALHPLKIG
                     EASIDHVNVELAVTPRDVKGLVLVRGKSGSLDAELNSGLNWPAGGVPTLSGAIEAKLA
                     AKDFRLVTLAPLLGSAVNELDGRFDADMAANVNGDLVTLRGTGQLTDGVVQLPSIGQR
                     FDGMSAKIDVQPSMIVLSDLKARGVTGAISGSARVEVDEHLGLRELNADIAIPKHQKL
                     PVTVQGVAMGDAWGHLTARVKNGKDKVEVAIVVPEL"
BASE COUNT          328 a          805 c          778 g          428 t
ORIGIN      
        1 cagctccggg acgacgatcg ccacttcgac cttgtccttg ccgttcttca cgcgcgccgt
       61 gaggtgcccc caagcgtcgc ccatcgcgac gccctgcacg gtgaccggga gcttctgatg
      121 cttcgggatc gcaatgtcgg cgttcaattc acgtaagccg aggtgctcgt cgacctcgac
      181 gcgcgcgctg ccgctgatcg cgccggtgac gccgcgcgcc ttgaggtcgc tgaggacaat
      241 catcgagggc tgtacgtcga tcttggccga cattccgtcg aagcgctgac cgatgctcgg
      301 cagttgcacg acgccgtcgg tgagttgacc cgtgccgcgc agagtgacaa ggtcgccgtt
      361 cacgttcgcc gccatgtccg cgtcgaagcg tccgtcgagc tcgttcacgg cgctgccgag
      421 caacggcgcc agcgtgacga gacggaaatc cttcgccgcg agcttggctt cgatcgcgcc
      481 gctcagcgtc ggaacgccgc ccgcaggcca gttgagccct gaattgagct cggcgtcgag
      541 cgaaccgctc ttgccacgca cgagtacgag acctttcacg tcgcgcggcg tcacggcaag
      601 ctcgacgttg acgtgatcga tcgacgcttc tccgatcttc agtgggtgca gagccagatc
      661 gacggccagc atgcgcttgt ccgccgcgta gtcggcgtga acgatacccg acagcacgcc
      721 ctcgatttgt cgattcttga gcgccgggat cgtctcgagc tccagcctgt cgagtacggc
      781 gtcgagcttg accttcagcc gatcgcgttc cttcgggtcg ctcgcggcga gcatggcgtt
      841 gcccgaccac gaggcgtcca cgtcgacggc tttggcctta tcccgctggg cgatgagctc
      901 cagtttgccc ccgtcgggcg cgtactcgac gtgaccgacg acggcgacgc tcggctgctt
      961 ttcgcccacg atacgctcac cggcgctcgc caggcgcgag gcgcgcacgt cgagcacgag
     1021 atgcgggtcc gcaatcgtac cggtgaactt ggcgtccccg gcgatctggc cacgcaccga
     1081 gagcggccga atcggctgcg gcaagctcca aaagctacgc gccggcatgg acgccttcac
     1141 ttcgagcggc gcctgcctga gaccggcgat gatttgctgg atgttctcgt tgagccaagg
     1201 ccccgcggtc gcgtcgagct cgagcagcgt gccgtgcttg tcgtagagcg tcgtgcgcac
     1261 ggcgatttgc gggttacgtt cgtcgagcgc taggtcgagt cccacgtcga tgccgcgata
     1321 gaccgcaggc gcagcctgca tggcctcgtt cggcgtgccg atctcgttcc gcggctcacg
     1381 gcgcccgatc aaggtcaggt cgtgtgtttg gacgtgcgcc ttgatctccg gtaaagcgtc
     1441 gtcgctgtcg cgcgcgtacg cgaggtcgag ctcgacggtt cccttcgcgt gctcgatcgg
     1501 tatggcgtcg acccggccgg cgagtggcgc catgctctcg agatcgagct tgccgcgcac
     1561 gcgtacgcgg ccgtccggcg cccacgactt gccgttcgcg agcgccgccg ggacgatgtc
     1621 gtccacgccg atcacgacct tcgcgccccg cacgagctcc gtctcgacca tgcccgacac
     1681 gccgtgatcg ccgagctcca ggttcaacga cgtccacccg ccggtcaccc ggtcgtagcc
     1741 gatttggctg atctcgccgt ggaccttgcc cttgccctcg ccgttcagcg ggccggagta
     1801 gcgcaggtcg agcgttgcgc gcgcgctgtg cacggggctc tcgacgcccg cgaccttcga
     1861 caggcggccg aggtcgagct cctgtgtctg cgcctcgacg tcgatgttct tgccccggag
     1921 gtgcaacgtt cccgcggcgt ggccggcgcc gtccaacacg aaatgctcga cgtcgagcgc
     1981 cggccccgtg agcgcgacgc gttcggcgga gagctggagt gtcccgtccc gatcgcgaaa
     2041 cgcgagggat ggcccgatga tctccgtctt accgggcgcg gtcttgagca gcgcgtggga
     2101 tttgagtccc tggccgcgcg cattcgtgag cacgaggccc acgtccgcct tcgcgggcgt
     2161 gccgttgaaa gctatgtcgg cggtctcgaa cttccggccc tgcacttcga gcgaacgcgc
     2221 gaagacgttg gctttgagca cgggcgcggc gaccgttccg tgcgcgtcga gcttcgcgcg
     2281 cacggcgccg gttcgggcgg cggggtgtcg cacaccgtcg agctgcacgt cggcgctcg
//
LOCUS       DATIML010000205         7665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2929897, whole genome shotgun sequence.
ACCESSION   DATIML010000205 DATIML010000000
VERSION     DATIML010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7665
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2929897"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            374..1009
                     /locus_tag="VLJ38_03605"
     CDS             374..1009
                     /locus_tag="VLJ38_03605"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSU38621.1"
                     /translation="MGLHIGSIAPDFEQESTAGRIRFYDWLGANWGLLFSHPKDFTPV
                     CTTELGRAAKLKGEFDRRGVRILAVSVDPLESHERWIKDIEDTQHVKFNFPILADADR
                     KVSTLYDMIHPEANDTFTVRSVFLIDDKRKIRAIITYPASTGRNFDEILRVIDSLQLT
                     DDHKVATPADWQLGDDVVILPSLQDPAEIARLFPAGYKSIRPYLRVTPPPR"
     gene            1049..3220
                     /locus_tag="VLJ38_03610"
     CDS             1049..3220
                     /locus_tag="VLJ38_03610"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU38622.1"
                     /translation="MAVGSVPSLKGERVSVDPSVVSSTDGTAQGLAARFLVQNLLGEG
                     GMGSVFVAQDRGLGRVVALKRLREGLEADADAMRRFILEAQIGAQLEHPNIVPLYSFE
                     RSQNGAPAIAMQLLEGRTMAQYINDAAAAPREARGMRGEYSLKERLGTLLGVCEAIHF
                     AHERGVIHRDLKPDNVMLGRFREVYVMDWGLARVTSVDGTVADPSGEPAPATPLVAAE
                     AKVHSELSNSATIAISSSNGAESATATRQGDVMGTPQYMPPEQALGMLHRVGPATDQF
                     ALGVMLQELATLLPARSHSSITVALSEAVLGKLAPPVDAEGVPVHAALQAIVARATRR
                     EPNERYASVNELANDIRRFVRDEPVSVYPEGLARRTVRAAARRPVLSMAVLSLCGLLA
                     SVAIIAGVVRDARQTKRQAAVLENTRRVLVAVTDRAHVVDVELSDRAADVQAVGAATA
                     ELLDRDVARASAKTPTVPTLAPSAAYAGVATSFDDIAVFWPGREKRVPAPDSAQKVER
                     LAPWLRRTLVDALPAEDRDGGIPTQERGLRAGHSDLMRAFVGLEDGTFAQFPAIDIAA
                     HDPRERPWYKNGSADQTLHWTRPIADVEKRTVRITAVLGMRSHGDFIGVAGADMRVSA
                     LAQKLALELPGFQRAYLVTEDGKIAVSESLEREMLAVAGDVYRDLPLPQVNVPELQAR
                     ITRGERGGYVTSGARLVVFARLISPPWTYVAEFDRTTYLGP"
     gene            3692..4174
                     /locus_tag="VLJ38_03615"
     CDS             3692..4174
                     /locus_tag="VLJ38_03615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSU38623.1"
                     /translation="MLTRKTTYGIRALVNIARAGERSLSVAEIAEREGIPQKFLAGIL
                     ADLRQRGIVHGHRGPIGGYKLAVAPEELTIAAVVELLGGPLFPFVCLAREPHGERCRE
                     CPGAGNCPARQALSEACAAAYRVLGTLALSDIMQNPRLANEQLPAPLPEGDEADPELP
                     "
     gene            4289..4750
                     /locus_tag="VLJ38_03620"
     CDS             4289..4750
                     /locus_tag="VLJ38_03620"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSU38624.1"
                     /translation="MITMKAKYAIKALARLALAPPGEPVLIADIAEAEAIPKKFLEAI
                     LAELKQHGVVHSRKGRGGGYLLSKKPETITLAAILRVLDGPIAPVPCLSRTAYRRCDG
                     CTDEATCSVRLVLREAYAASVEVLERTTLADVATNASLLAGHERLPLRYSI"
     gene            4825..5343
                     /locus_tag="VLJ38_03625"
     CDS             4825..5343
                     /locus_tag="VLJ38_03625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38625.1"
                     /translation="MMRSSFGVMTALLLLSGCGVGEPDHVKSPDQFIAEQDQEGAQQV
                     AAQKQHEGSREAPTETEDEKLREWDDKQATLELKRAARSAETCPESVTEKSPKGMATV
                     TLVFAKDGKVKDSKIDDVYAEKAVGTCVLRAMGSVIVPAYKGDEHTVVWEIDLKGGKQ
                     KHSGPQGGDKSE"
     gene            complement(5405..5626)
                     /locus_tag="VLJ38_03630"
     CDS             complement(5405..5626)
                     /locus_tag="VLJ38_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38626.1"
                     /translation="MAKAPSVTTTELDGENAALKAANLAFGRKQRSVTRLASIELKSS
                     DPRSSVWEAVAMASVGLLAVLVVLGVWLL"
     gene            complement(5693..>7665)
                     /locus_tag="VLJ38_03635"
     CDS             complement(5693..>7665)
                     /locus_tag="VLJ38_03635"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU38627.1"
                     /translation="HLLTRLGGGGLDAQLIKDLERRPGPLALLLPIRVRGRTILVLYG
                     DHGDADVDLTTIGDVISFAPLVATTLERLIVQRKRGRAEALVLGSLVPKPPKRAVMPG
                     PEERAQALAAVLTPQRRPPPFSSAPPAGPLNALGPASAPPASAPPAPAPSAPPPSLPP
                     VTEPLVSIPAPAAPVENTALLFSEPPPREISTPPSQARARPLAPMLGLSTTSSSSNPP
                     RSIAEALARPVIPIGRISERPTDPASSKPNGPRSSGSLPPQAVDAGWGEISGASSPFA
                     RDERGTRPGVGSVRPHASSAETASVETAESPDVSITAAPSDEELPELAAESWTEESLS
                     GVPLAPASRAAAHSARPLPAPHAENNRDLPTVIVDMAEDCKALLEQLLQGDASAGDRL
                     VAAGAPAIAVLVAAFPGPIEVPSSRRATAGLARASDCGPVMRTLARIGQKAVPFLVVR
                     TNDGDAEVRGYATRLLGEISGPESAHAIARRFFDGDPEVRRAAVAAARLLASSPDAIA
                     TLVAELGGTAEDRMRPTTVRLMACDTLAELRQAQAVPYLVRTLEDNPVDIVQSARRAL
                     VVLARQDFGTDAAAWQGWWRTASPRHRIEWLIDALTHQTAEIRRAAGDELKALTREYF
                     GYYDDLPPAERAAAQRQYRHWWETRGKARFRG"
BASE COUNT         1278 a         2523 c         2608 g         1256 t
ORIGIN      
        1 tcctttttcg gtatctagcg actcgcttgc agacgccgct gccgacccct cactgacagg
       61 agataactcc agagtgttac tcgggcggca caaactgctt gacacccgca ggccctaagc
      121 ctacatgttc gatagagttt atcatgacaa agaattcctg agtaatttag gaaggtagcg
      181 cagcagctgc tgcatcgcgc gtgtgacgag ctccttggtc ccggcggcga gcgaggtccg
      241 agtaccgagc tccgggttcg actcccggca ggagcactac ttcgagccga atactcggct
      301 cagctacacc ggcacgctat cgccgctctg acggcgcgcg ccctcctatt cacttccaac
      361 gacgaggaac gacatgggac tccacatcgg cagcatcgcc cccgacttcg agcaggagtc
      421 gaccgccggc cgcattcggt tttacgattg gcttggcgcg aactggggtc ttctgttttc
      481 gcaccccaag gacttcacgc ccgtttgcac gacggagctc ggtcgcgccg ccaagctcaa
      541 gggtgagttc gaccgccgcg gcgtgcgtat cctggcagtc agcgtcgatc cgctcgagag
      601 ccacgagcgc tggatcaagg acatcgagga cacccagcac gtgaagttca acttcccgat
      661 tctggccgac gccgaccgca aggtatcgac gctctacgac atgattcatc cggaggcgaa
      721 cgacactttc acggtgcgat ccgtcttttt gatcgatgac aagcgcaaga ttcgcgcgat
      781 catcacgtat ccggccagca cgggtcgtaa cttcgacgag atcctgcgcg tcatcgactc
      841 gctgcagctc accgacgatc acaaagtcgc gactccggcc gattggcagc tcggcgacga
      901 cgtcgtgatt ttaccgtcgc tgcaggatcc ggcagagatc gcccggctgt tccccgccgg
      961 ttacaagtcg attcggccct atttgcgcgt gacgccgccg ccacgctgaa actcgctcgc
     1021 tacaattcga acgctgtatc ctgccgccat ggcggtaggt agcgttccgt cgctcaaagg
     1081 cgagcgtgtt tcggtcgatc ctagtgtcgt ctcgtcgacg gacggcacgg cccagggcct
     1141 ggcggcccgc tttttggtcc agaacctgct cggcgagggc ggcatgggca gcgtgttcgt
     1201 ggcgcaggac cgggggctcg gccgtgtcgt ggcgctcaag cgcttgcgcg agggcctgga
     1261 agccgacgcg gatgccatgc ggcgcttcat cctggaagcg cagatcggtg cccagctcga
     1321 gcacccgaac atcgtcccgc tctacagttt cgagcgttcg cagaacggcg cgcccgccat
     1381 cgcgatgcaa ctgctcgagg ggcgcacgat ggcacagtac attaacgacg ccgcggcggc
     1441 gccgcgggag gcgcgcggca tgcgcggcga gtattcgctc aaggaacgac tcggcacctt
     1501 gctcggcgtg tgcgaggcga ttcacttcgc gcacgagcgt ggagtcatcc atcgcgatct
     1561 gaagccagac aacgtgatgc tcggtcgctt tcgcgaagtc tacgtgatgg attggggact
     1621 cgcgcgggtg acgagcgtgg acggcaccgt ggcggacccg agcggcgagc ctgcgccggc
     1681 gacgccgctc gtggcggctg aagcgaaggt gcacagcgag ctctcgaact cggccaccat
     1741 cgcgatctcc agcagcaacg gtgcggaatc ggcgacggcg acgcgtcagg gcgacgtgat
     1801 ggggacgccc cagtacatgc cgcccgagca ggcgctcggc atgttgcacc gcgtcggccc
     1861 cgccacggat caattcgcgc tcggcgtgat gctgcaagag ctcgcgacgc tgctgccggc
     1921 gcgttcgcac agctcgatca ccgtggcgtt gagcgaagcg gtgctcggca agctcgcgcc
     1981 gcccgtcgat gccgaaggtg tcccggttca cgccgcgctt caggccatcg tggcgcgcgc
     2041 gacccgcagg gaaccgaacg aacgctacgc gtccgtcaac gagctcgcca atgacattcg
     2101 ccgcttcgtt cgcgacgaac ccgtctcggt ctatcccgag gggctggcgc gccgaacggt
     2161 acgcgccgcc gcgcgccggc ccgtgctcag catggccgtg ctgtcgctgt gcgggcttct
     2221 ggcgagcgtg gccatcatcg cgggcgtcgt gcgagacgcg cgtcagacca agcgccaggc
     2281 cgccgtgctc gaaaacacgc ggcgcgtgct ggtcgccgtg accgaccggg cgcacgtggt
     2341 ggacgtcgag ctcagcgatc gcgcagcgga cgtccaagcc gtcggggccg ctacggccga
     2401 gctactcgac cgcgacgtcg cgcgcgcttc ggcgaagacc ccgacggtgc ccacgctcgc
     2461 gccgtcggcg gcctatgcag gcgtggccac gagcttcgac gacatcgccg tattctggcc
     2521 cggtagggaa aagcgggtgc ctgcgccgga cagtgcgcaa aaggtcgagc ggctcgcacc
     2581 ctggctgcgc cgaaccctgg tggacgcgct gccggccgaa gatcgcgatg gcggcattcc
     2641 cacgcaagag cgcggcctcc gcgccgggca cagcgacctc atgcgcgcgt tcgtcggcct
     2701 cgaggacggc acgttcgcgc aatttcccgc gatcgacatc gcggcgcacg acccacgcga
     2761 gcggccttgg tacaaaaacg gcagcgccga tcagacgctc cactggacgc gtccgatcgc
     2821 cgacgtcgaa aagcgcaccg ttcgcatcac ggccgtcttg ggcatgcgct cgcacggtga
     2881 cttcatcggc gtcgcgggcg ccgacatgcg cgtctccgcg ctcgcgcaaa aactcgcgct
     2941 cgagttgccg ggctttcagc gggcctacct cgtcaccgaa gacggcaaga tcgccgtctc
     3001 ggagagtctc gagcgcgaga tgctcgcggt cgcaggcgac gtttatcggg acttacccct
     3061 gccgcaggtg aacgtgcccg agctccaggc gcgcatcacg cgcggcgaac gtggcgggta
     3121 tgtcacgtcc ggcgcgcgtc tcgtcgtgtt cgcgcgcctc atctcgcccc cttggactta
     3181 cgttgccgag ttcgatcgca cgacctacct cgggccctga tcgaacggcc tgaccggttc
     3241 acgcggcgtg ccgagtcggc gagtcgcggt cctctcttag ggttcttagg gtcggcggga
     3301 gtgaggcgga atggccgtgg ggtcgcacgt ccgctgcgcg atggggtcgc cctcttcgac
     3361 catccctcga gtggcgggtg gttcggtttg actacaactc gtttagaacc tataaagtct
     3421 atgggttaga tagagaaatt ggtaaaacct cgataatgct acggtttact gccagagccc
     3481 ctcgtcttgc ccgagcttcg ggctgcgccc gtcgaacgat cgagctcgac gccaacgcga
     3541 tccgcggagt gagcgtcggt tctcgtcgtg ccgaggcgtc cctgctcagc tcgtctggcg
     3601 gggcaggacg cgctcgtcat cgcctggtac ccgacccatg gcgctctccg gaattctgaa
     3661 agtcacaccc taacccaaac gggggtcatt catgttgact cgaaaaacga cctacggaat
     3721 ccgcgcgctc gtcaacatcg ctcgcgcggg cgagcgctct ctatccgtcg cggagatagc
     3781 cgagcgcgag ggcatcccgc agaaattcct tgccggcatt ctcgcggact tgaggcagcg
     3841 cggcatcgtg catgggcacc ggggcccgat cggcgggtac aagctcgccg tggccccgga
     3901 agagctgacg atcgccgccg tggtcgagct cctcggcggg ccgctgtttc cgttcgtgtg
     3961 tctcgcgcgc gaaccgcacg gtgagcgctg ccgggaatgt ccaggcgcgg ggaattgccc
     4021 ggcgcgacag gcgctgtccg aggcctgtgc ggcggcctac cgggtactcg gcacgctcgc
     4081 gctgtcggac atcatgcaga accccaggct tgcgaacgag cagctgcccg cgccgctacc
     4141 tgagggtgac gaggcggacc ccgagctacc ttgagcctcg aagggccggg tttttggccc
     4201 cgtccggctg gggctcgccg cgcgcccaac atcaagtagg ctagccggga atgactcttg
     4261 aaaaacccgg aggaaacctg agctcccgat gatcacgatg aaggcaaagt acgcgattaa
     4321 ggcgcttgcg cgtctggccc tggcgccgcc cggcgagccc gtgctcatcg cggacatcgc
     4381 agaagcggaa gcgattccga agaagttttt ggaggccatc ctggccgagc tcaagcagca
     4441 cggcgtcgta cacagtcgta aaggccgtgg cgggggctac ctcttgtcaa agaaaccgga
     4501 aacgatcact ctcgccgcaa ttctgcgggt gctcgacggt cccatcgcgc ccgttccgtg
     4561 cctgagccgg accgcctacc ggcgctgcga cggctgcacg gatgaagcga cgtgctcggt
     4621 tcgactcgtc ttgcgcgaag cctatgccgc aagcgtcgaa gtgctcgagc ggacgacgct
     4681 cgccgacgtg gccacgaacg cgagcctgct cgccggacac gagcggttgc cactgcgcta
     4741 ttcgatctga ttcgggcgac tggcttggtt tccgcgccgg acgagcgttt gcaaagccgg
     4801 aacgtacgca ctaacctcgc gcgcatgatg cgttcgtcgt tcggtgtcat gacggccctg
     4861 ctcctgctct ccggctgcgg agtcggcgaa cccgatcacg tcaaatcgcc ggaccagttc
     4921 atcgccgagc aagaccaaga aggcgcgcag caggttgccg cccagaagca gcacgagggc
     4981 tcccgcgagg cgcccactga aaccgaggac gagaagctcc gcgagtggga cgacaagcag
     5041 gcgacgctcg agctgaagcg cgccgctcgc tccgcggaga cctgccccga gtccgtgacg
     5101 gagaagtcgc cgaagggcat ggccacggtg acgctcgtct tcgccaagga cggcaaggtc
     5161 aaagactcga agatcgacga cgtgtacgcc gagaaggcgg tcggcacctg cgtgctccgc
     5221 gcgatgggct ccgtgatcgt gcccgcttac aagggtgacg agcacaccgt cgtctgggaa
     5281 atcgacctca agggcggcaa gcaaaaacac tccgggcccc agggcggcga caagagcgag
     5341 tgaacggcgc ttgcgtagcg gccacgacgc gcttgcgtcg cggcaaggcg acgaagcggg
     5401 cgtttcagag cagccaaacg ccgagcacga cgagcacggc gagcagcccg acggacgcca
     5461 tcgcgaccgc ttcccacacg gaagagcgag ggtcgctgga tttgagctcg attgaagcca
     5521 aacgcgtcac gctgcgctgc ttcctgccga atgccaggtt ggcggctttc agcgccgcgt
     5581 tttcgccgtc gagctccgtc gtcgtcacgg acggcgcttt tgccatgggt cagcgggggc
     5641 tgtaaagcgg cgcgtccgag caggtcctcg tgttcagtgt gtcaaagtaa gtctaacccc
     5701 ggaaacgcgc cttaccgcgc gtctcccacc agtgacgata ttggcgctgc gctgcggcgc
     5761 gctccgctgg cgggaggtcg tcgtagtagc cgaagtactc gcgcgtgagg gctttgagct
     5821 cgtcgccggc ggcgcggcga atctctgcgg tttgatgtgt gagcgcgtcg atgagccatt
     5881 cgatgcgatg acggggagac gccgtgcgcc accaaccttg ccacgcggcg gcgtcggtcc
     5941 cgaaatcttg gcgtgcaagc acgacgagcg cgcggcgcgc gctctggacg atatcgaccg
     6001 gattgtcctc gagcgtgcgc acgaggtacg ggactgcttg cgcttggcgc agctcggcga
     6061 gcgtgtcgca ggccatgagc cgcaccgtgg tcggccgcat gcgatcttcc gccgttccgc
     6121 ccagctcggc gacgagcgtc gcgatcgcgt cgggcgagct cgcgagcaaa cgcgctgcgg
     6181 cgacggcggc gcgccgcacc tcgggatcac cgtcgaagaa gcgccgcgcg atcgcgtggg
     6241 cgctctcggg tcccgaaatt tctccgagta agcgtgtggc gtagccgcgc acttcggcgt
     6301 cgccgtcgtt cgtgcgcacg accaagaacg gcacggcttt ctgtccgatg cgcgcgagcg
     6361 tgcgcatcac ggggccgcaa tcggaggcac gcgcgagccc cgccgtcgcg cggcgtgaag
     6421 acggtacctc gatgggtccg gggaacgccg cgaccagcac cgcgatggcc ggcgctcccg
     6481 ccgccaccaa acgatccccc gcgctcgcgt cgccttgcaa cagctgttcg agcagcgcct
     6541 tgcagtcttc cgccatgtcg acgatgaccg tcggcaagtc acgattgttt tccgcatgcg
     6601 gcgcgggcaa cggccgcgcg ctatgcgccg ctgctcgact cgcgggagcg agcggcacgc
     6661 cggacagcga ctcttccgtc caactctccg cggcgagctc gggcagctct tcgtcgcttg
     6721 gggcagcggt gatcgaaacg tcaggcgatt cggctgtctc gacgcttgcg gtttcggcgg
     6781 acgacgcgtg cggtcgcacg ctgcccacgc cggggcgcgt gccgcgctcg tcgcgcgcga
     6841 atggcgagct cgctccggaa atctcgcccc agccggcgtc gacggcttgt ggcggcaagg
     6901 aacccgagct gcgcgggcca ttcggcttcg agctcgcggg atcggtggga cgctcggaga
     6961 ttcgcccaat cgggatgacc ggtcgcgcca gggcttccgc gatcgatcgc ggaggattgc
     7021 tcgacgaaga ggtcgtcgag agacccagca tcggcgcgag cggccgcgcc cgcgcttgcg
     7081 aaggcggcgt ggagatttca cggggcggcg gctcgctgaa caggagcgcg gtgttttcga
     7141 ccggcgcggc tggtgcaggg atcgagacga gtggttcggt gacgggcggc agtgagggcg
     7201 gcggcgcgga aggcgccggt gctggcggcg ccgacgccgg cggcgccgac gccggaccga
     7261 gggcgttcag cggaccggcg ggaggtgcgg acgaaaatgg cggtgggcgc ctttgcggcg
     7321 tgagcacggc cgcgagcgct tgcgctcgtt cctcgggtcc aggcatgacc gcgcgcttcg
     7381 gcggcttcgg gaccagcgag ccgagaacga gcgcttccgc gcggcctcgt ttgcgctgga
     7441 cgatgaggcg ctcgagcgtc gtcgcgacga gcggcgcgaa ggatatcacg tcgccgatcg
     7501 tcgtgaggtc gacgtcggcg tcgccatggt cgccgtagag cacgagaatg gtgcgcccgc
     7561 gcacgcggat cggcaggagc aaggcgagcg gtccggggcg gcgctcgaga tctttgatca
     7621 gctgggcgtc gagtccgccc ccgccgagac gcgtcagaag atgcc
//
LOCUS       DATIML010000206         1901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4951399, whole genome shotgun sequence.
ACCESSION   DATIML010000206 DATIML010000000
VERSION     DATIML010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4951399"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VLJ38_03640"
     CDS             <1..277
                     /locus_tag="VLJ38_03640"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU38628.1"
                     /translation="RIAQEAMTNVERHAGARKVELELARDECRVRLRVTDDGRGFDPR
                     IIDRPELDGLGLRSIRQRVEEQTGTFRLRSRPGFTELAIDFGHGRPA"
     gene            274..975
                     /locus_tag="VLJ38_03645"
     CDS             274..975
                     /locus_tag="VLJ38_03645"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU38629.1"
                     /translation="MTASARVRVAFVEDHPVYCEGLRSVLQSDTRLEFVGEASDAREG
                     LALARRAQPDVLLTDIALKGGATGITLTRTLTQQPPAPRILVLSVQTGESYVRSAYDA
                     GARGYVNKADPPAALVAAVHAVANGGSFWPTGVDFGAGLNVLTKKELEVARLLARGFR
                     NGQIATILQCSPRTVEAHRAKIYEKLGVGTVIGVREKLEERGLLETESVLIEIEDEPG
                     NPERGPSRNGRDKGE"
     gene            complement(946..>1901)
                     /locus_tag="VLJ38_03650"
     CDS             complement(946..>1901)
                     /locus_tag="VLJ38_03650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38630.1"
                     /translation="VTEHTINERTKLTLNATSLATDPIRPYAYVAVGSDVAVYNVYSG
                     AHLTTFSNVAPNIGDMVVSSDGARLFVIDTTNFAVVPVDLEHGNLGVSWPLGDAAPAS
                     VAYTRRRGQGLVITGNGSFFDATTGERFAARFSGGYYGNVVVSASRDGSRFCALDMGL
                     SPYSMGCTALDFDAGASGIVLGSYVSAQSSGNWGVGSNGQDVALTSDGSRAFVASGAP
                     YDFRGYDTSTGSVLQALPGDAYPNNVEVTDQGLLVAGASVWYDDNDVWVYDAAGFLLA
                     SHKLSGYAQALRPRQLKASGDGLRLVALTDDPLLAFVTAVP"
BASE COUNT          329 a          619 c          659 g          294 t
ORIGIN      
        1 ccgcatcgcg caggaggcga tgacgaacgt cgaacggcac gccggcgcgc gcaaggtcga
       61 gctggagctc gcgcgcgacg agtgccgggt gcgcctacgc gtcaccgacg acgggcgcgg
      121 cttcgatccc cggatcatcg atcgacccga gctcgatggc ctcggacttc gcagcattcg
      181 ccagcgcgtc gaagagcaga cggggacatt ccggctgcgc tcgcgccccg gctttaccga
      241 gctcgccatc gacttcggcc acgggaggcc agcatgaccg cgagcgcccg agttcgggtg
      301 gcgttcgtcg aagaccatcc ggtctattgc gaagggctcc gttcggtcct ccaaagcgac
      361 acgcgcctcg agttcgtcgg cgaagcgagc gacgcgcgtg aagggcttgc cctggcgcgg
      421 cgcgcccagc cggacgtgtt gctcaccgat atagcgctca aaggcggtgc gacggggatc
      481 acgctcacgc gcaccctgac gcaacagccg cccgcgccac gcattctcgt gctgagcgta
      541 cagacaggcg aaagttacgt ccggagcgcg tacgacgctg gagcgcgcgg ctacgtgaac
      601 aaagcggatc cgccggcagc gttggtcgct gcggtgcatg ccgtggcgaa tggtggcagc
      661 ttctggccaa cgggcgtcga ctttggcgcg ggcctgaacg tgctcacgaa gaaggagctc
      721 gaagttgcgc gcctcctcgc gcgtggcttc cgcaacggtc agattgccac gatcttgcag
      781 tgctccccgc gcacggtcga ggcgcatcgc gcgaagatct acgagaagct cggtgtcggg
      841 acggtaatcg gcgtgcgcga gaagctcgaa gagcggggct tgctcgagac cgagtccgtc
      901 ctcatcgaga tcgaggacga acccgggaac cccgagcgcg gcccatcacg gaacggccgt
      961 gacaaaggcg agtagcggat cgtcggtgag cgcgacgagg cgcagtccgt cgcccgacgc
     1021 tttgagctgc cgcggccgaa gcgcctgcgc atagcccgac agcttgtggc tcgcgagtaa
     1081 gaagccggct gcgtcgtaca cccaaacgtc gttgtcgtcg taccagacgc tcgcacccgc
     1141 gacgagcagg ccctgatcgg tgacctcgac gttgttcggg tacgcatccc ccggaagagc
     1201 ctggaggacg ctgcccgtcg aggtgtcgta accgcggaag tcgtagggcg cgcccgaggc
     1261 gacgaaggcg cgggacccgt cgctcgtgag ggccacgtct tggccgttgc tgccgacgcc
     1321 ccaattgccg ctcgattgcg cggacacgta actgccgagc acgatgccgc tggctccagc
     1381 atcgaagtcg agcgccgtgc aacccatgct gtacgggctg agccccatat cgagcgcgca
     1441 gaagcgggag ccgtcgcggc tcgcggagac gacgacgttg ccgtaatagc cgccgctgaa
     1501 tcgcgccgcg aagcgttcac ccgtcgtggc gtcgaagaat gagccgttgc ccgtgatgac
     1561 gagtccctgc cctcgccggc gtgtgtaagc gacggacgcc ggcgccgcgt caccgagcgg
     1621 ccagctcacg cccaggttgc cgtgctcgag gtccaccggt acgacggcaa agttcgtcgt
     1681 gtcgatcacg aagaggcgcg cgccgtcgga gctcacgacc atgtcgccga tgttgggcgc
     1741 gacgttggag aatgtcgtga ggtgcgcgcc gctatacacg ttgtaaacgg cgacgtcgct
     1801 gccgaccgca acataggcgt agggccgaat cggatccgtc gcgagcgacg tggcgtttag
     1861 ggtcagcttc gtgcgttcgt tgatggtgtg ctccgtcacc c
//
LOCUS       DATIML010000207         3385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4084188, whole genome shotgun sequence.
ACCESSION   DATIML010000207 DATIML010000000
VERSION     DATIML010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3385
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4084188"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VLJ38_03655"
     CDS             <1..283
                     /locus_tag="VLJ38_03655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38631.1"
                     /translation="RREGLVADPDQPSFPCPPKPPDPLPDPQCSLATIWQRALERGIR
                     GDRLARIEYYRARGGPAWRFEQAETGQNFVLYGDCRRELKGAATAGHVP"
     gene            complement(286..927)
                     /gene="yihA"
                     /locus_tag="VLJ38_03660"
     CDS             complement(286..927)
                     /gene="yihA"
                     /locus_tag="VLJ38_03660"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HSU38632.1"
                     /translation="MTKKDHIYAPVAVGSEFLGSASHAPEFPPSPSVEVAFAGRSNVG
                     KSTLLNLMLGQKLAHTSSTPGRTRTLNFFGVKTRGGSALTFVDLPGYGYAKRAKEERF
                     AWGEFVERYLLERLPLALVIVLVDARRGPEHDDLELLKMIKDARPGGRDAPRVLMVAT
                     KLDKLPLAQRKPALAALARSGFSVIGVSASDPASIDALWRRVLLAVGLEQKAT"
     gene            complement(924..2555)
                     /gene="murJ"
                     /locus_tag="VLJ38_03665"
     CDS             complement(924..2555)
                     /gene="murJ"
                     /locus_tag="VLJ38_03665"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HSU38633.1"
                     /translation="MNERVSPGGAEAGERRNIAKRAGIVATGTLASRLLGLGRDQTIA
                     ALFPRGVTDAFFVAFTIPNVLRQLLGEGAVQNAVLPVLVKIREQRGEAEARRFFGAVR
                     GVSLVALVATTALGIGFAPALVSLFAGGYASVPGELERTVLLTRWVFPYILCMGTAAL
                     GAAALNTHQRFVATSFAPGLLNVSFIALALVLPPVLGAHGYEPGLALAAGALLGGVLQ
                     VVAQWPSLKAIGYFGAPSFALRDPGVREVGRRMAPLLVGMGVYYIDVVLARRFLSELG
                     LGAQSYFSWAMRLCDFPQGIFVMALQAAALPSLARLAARGDRDELGRTFAFGMRLALF
                     VALPATALFVGLAEPLVVLLFQRGEFDHEAARQTAAALVAQGSGVWLVAAVRQLLAVY
                     YAVGDTRTPVYVAATDLVAFIVLALVLRGPLGHVGVGWAVSGSSAVQAGLLWLLLLKK
                     VPSVAGQGIAGSVLRVAGASSAAVIAGRCVAFALDRGPQAGVVARALPGLFGAAAFGV
                     TFLAVAFLLKSPELLTLREEIRRKLMRRRGGGTPS"
     gene            complement(2603..3337)
                     /gene="recO"
                     /locus_tag="VLJ38_03670"
     CDS             complement(2603..3337)
                     /gene="recO"
                     /locus_tag="VLJ38_03670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HSU38634.1"
                     /translation="MAVARARPHESVRTTRALLLKRIEYGEADLVLSLFTERYGRVSA
                     LARAARKSTRRYGGALEPMHTLEVGLEERPKSELFMLREARIAVPRLGLIESLARLEA
                     AGKALSWARRAAPPRTPEPDLWDAVVALLDELTRRDQPIEPKRLLAAAGLRILATLGW
                     GLDFERCVRCGKECPPEQVALVDPQHGGLVCRACGGARVRLDGPTRERLARAAATGDA
                     EALTTSDAELASDLVDAVLKAHAGLE"
BASE COUNT          565 a         1220 c         1158 g          442 t
ORIGIN      
        1 ccgacgcgaa gggctcgtgg ccgatcccga tcaaccgagc tttccctgcc ctccgaagcc
       61 gcccgatccg ttgcccgatc cgcagtgctc actcgcgacg atttggcagc gcgcgctcga
      121 acgcgggatc cgcggcgacc gcctcgcgcg catcgaatat taccgggcgc gcggcgggcc
      181 ggcgtggcgc ttcgagcaag ccgaaacagg ccagaatttc gtgctctatg gcgactgccg
      241 gcgcgagctc aaaggcgccg ccacggctgg ccacgtgccg taaggctacg tcgccttctg
      301 ctcgagaccc acggccagaa gcacgcggcg ccagagcgcg tcgatgctcg ccggatccga
      361 cgcgctcacc ccgatcacac tgaagccgct ccgcgcgagc gcggcgagcg cgggcttgcg
      421 ctgcgcgagc ggcagcttat cgagcttggt cgcgaccatg agcacccgcg gggcgtcgcg
      481 tccgccgggt cgagcatctt tgatcatttt caagagctcg agatcgtcgt gttcggggcc
      541 gcggcgcgca tcgaccagca cgatcacgag cgcgagcggc agccgctcga gcaagtagcg
      601 ctcgacgaac tcgccccaag cgaagcgctc ttctttggcg cgcttcgcat acccgtagcc
      661 gggcaaatcg acgaaggtga gagcgctgcc gccgcgtgtt ttgacaccga agaaattcaa
      721 cgtgcgcgtg cggcccggtg tcgagctcgt gtgcgcgagc ttttgcccga gcatcaggtt
      781 caagagcgtg ctcttgccga cgttcgagcg gccggcgaac gccacttcca cggagggtga
      841 gggcgggaac tcgggcgcgt ggctcgcgct accgagaaat tcggagccga ccgccaccgg
      901 cgcgtagatg tgatcttttt tggtcatgaa ggtgttccgc cgccacgtcg gcgcatcagc
      961 ttgcgccgaa tttcctcgcg cagggtcagg agctccggac tcttgagcag gaaggccacg
     1021 gcgagaaacg taaccccgaa tgcggccgcg ccgaagaggc ccggcagcgc gcgcgcgacg
     1081 acgccggcct gcggcccgcg atcgagtgcg aaggcgacgc agcgcccggc gataacggcc
     1141 gccgacgagg cgcccgccac gcgcagcacc gatcccgcga tgccctgtcc cgcgacggac
     1201 ggcaccttct tcaacagcag gagccagagc aagcctgcct gcacggcgct cgacccgctc
     1261 acggcccagc cgacgcccac gtgcccgagc ggcccgcgca gcacgagcgc gagcacgatg
     1321 aaggccacga gatccgtcgc cgccacgtaa acgggcgtgc gcgtgtcgcc caccgcgtaa
     1381 tagaccgcga gcagctgccg caccgccgcg acgagccaca cccccgaacc ttgcgccacg
     1441 agcgcggccg cggtctggcg cgccgcttcg tgatcgaact cgccgcgctg aaacaagagc
     1501 acgacgagcg gctccgcgag ccccacgaac agcgccgtcg cgggcaacgc cacgaacaac
     1561 gccaggcgca tcccgaacgc aaacgtccgc ccgagctcgt cgcgatcacc ccgtgccgcg
     1621 agccgcgcga ggctcggcaa cgccgccgct tgcagcgcca tcacgaagat gccctgcggg
     1681 aaatcgcaga gccgcatcgc ccacgagaag taactctgcg cgcccaggcc gagctcggac
     1741 aagaagcgcc gcgcgagcac gacgtcgatg taataaacgc ccataccgac gagcagcggc
     1801 gccatgcggc gcccgacctc acgcacaccc ggatcgcgta gggcgaacga aggcgcgccg
     1861 aagtagccga tcgctttgag actcggccac tgcgcgacga cttgcagcac gccgccgagc
     1921 agggcgcccg cggcgagcgc cagtccaggt tcgtagccgt gcgcgccgag cacgggcggg
     1981 agcacgaggg cgagcgcgat gaacgacacg ttcaggagcc ccggcgcgaa cgaggtcgcg
     2041 acgaagcgct ggtgcgtgtt gagcgcggcc gcgccgagcg ccgccgtccc catgcacagg
     2101 atgtacggaa agacccagcg cgtgagcagc acggtgcgct cgagctcgcc cgggacgctc
     2161 gcgtagccgc ccgcgaagag cgaaacgagc gcgggcgcga agccgatgcc gagcgccgtc
     2221 gtcgcgacga gcgccacgag cgaaacgccg cgcacggcgc cgaaaaatcg gcgcgcttcc
     2281 gcttcgccgc gctgctcgcg aattttcacg agcacgggca agacggcgtt ttgcacggcg
     2341 ccctcgccga gcagttgccg gagcacgttc gggatcgtga aggcgacgaa gaacgcgtcc
     2401 gtgacgccgc gcggaaacag cgccgcgatg gtctgatcgc gaccgagccc gagcaagcga
     2461 ctcgcgagcg tgcccgtcgc gacgatgccg gcgcgcttgg cgatgtttct gcgctcgccc
     2521 gcttcggcgc cgccggggct cacgcgctcg ttcacggccg cccttgtatc actctcggcg
     2581 tgatgagccg tcttctccgg cgtcactcga gccctgcgtg cgctttgagg acggcgtcga
     2641 ccaggtccga ggcgagctcc gcgtcgctcg tcgtgagcgc ttcggcgtcg cccgtcgccg
     2701 cggcccgcgc caaacgctcg cgcgtcggtc cgtcgaggcg cacgcgggcg cccccacacg
     2761 cacggcagac gagcccgccg tgctgcggat ccacgagcgc gacctgttca ggcggacact
     2821 ccttgccgca gcgcacgcag cgttcgaaat ccaggcccca gccgagcgtc gcgaggatgc
     2881 gcaagcctgc ggcggccagc agccgtttcg gctcgatcgg ctgatcccgg cgcgtgagct
     2941 cgtcgagtag cgccacgacg gcgtcccaga gatcgggctc gggcgtgcgc ggcggcgcgg
     3001 cgcgtcgcgc ccacgagagc gctttgcccg cggcctcgag gcgcgcgaga ctctcgatga
     3061 gtccgaggcg cggcacggcg atgcgcgctt cgcgcagcat gaagagctcg ctcttcggtc
     3121 gttcctcgag tccgacttcg agcgtgtgca tcggctcgag cgcgccgccg tagcggcgag
     3181 tgctcttgcg cgccgcgcgt gccagcgccg aaacgcgccc gtagcgttcc gtgaacaagc
     3241 tcaacacgag atcggcctcg ccgtactcga tgcgcttgag caagagcgcg cgcgtcgtgc
     3301 gcacgctttc gtgtggtcgc gcgcgcgcga cagccacggg tcagccgacg ccgtgcgtcg
     3361 tgtgagagcg cgcggagagc tcttg
//
LOCUS       DATIML010000208         4090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2930295, whole genome shotgun sequence.
ACCESSION   DATIML010000208 DATIML010000000
VERSION     DATIML010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4090
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2930295"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1145
                     /locus_tag="VLJ38_03675"
     CDS             <1..1145
                     /locus_tag="VLJ38_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU38635.1"
                     /translation="HLCVILFTAFGSMELAVEALRAGAYDFVTKPVALDVLTLTLKRA
                     ALRQGVGRDLREATTAETPVMFGMVGSSAALQRVFDVIGRIARTDTAVLIQGETGTGK
                     ELVARAIHEQSERKGRFVAINCSAMPEGLLESELFGHMAGAFTDAREARAGLFVEARG
                     GTVFLDEIGEMPVGMQAKLLRALQEKKVRPLGGAREIAFDARIVTATNRNLAEEVEAK
                     RFRADLYYRVNVVTVDVPSLRDRPDDILPLARYFLGRFKRPGHEPLRLGRAVAERLVA
                     YAWPGNVRELENCIERAVAFAQFDEITVDDLPPEVKLVWDDAASDNSTLDFVERNYIQ
                     KVLEAVSGDTRAAAGILGFDNRTLRRKLGLADVERDGDAGSGDSSA"
     gene            1554..2774
                     /locus_tag="VLJ38_03680"
     CDS             1554..2774
                     /locus_tag="VLJ38_03680"
                     /inference="COORDINATES: protein motif:HMM:NF020084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HSU38636.1"
                     /translation="MSVHATTCFSEESDSEDAGRAVGGSLRREFGAEPLRAALVYATI
                     NHDMEELVASIRQELGPDVPLIGCSVQGVVSNDKLTEEGYAVGVMGFGGSALATATTT
                     AHDIELDSFEKGKGIARDLKSRLGREPKLVVLSYDPLCGTDVEALLRGAQTELACPIV
                     GGAAGQPWGPPVRTYQFDGKQVFSKGAVALALAGPFEAELGLCHGTVPTGLTITVTKT
                     DGNRILEIDGRRAHDVWCEQTGLDPKAGAVIHQDWVASWAIGVERRYQAPGPNGPTEQ
                     VVRMIRGAFGVDNEQGSIILQAAVPEGSKVMFHHREVSQLLAGTKAMGLELAGRLQGK
                     TPWAVLGFECAARTFPFLGPANTRDEHAGLRNAVAPNTPWLGMMAWGEVAPLGGEPAF
                     HNYTYPLAVLTRQA"
     gene            2793..>4090
                     /locus_tag="VLJ38_03685"
     CDS             2793..>4090
                     /locus_tag="VLJ38_03685"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSU38637.1"
                     /translation="MPVDDEQLVLKEKALQLLRNERELFALRARHEQTVSWLRILQSI
                     PELIDYKLARSELCKRIGKSLITGLRVQRANFFGYRDGELRLVSGKAAPERASLSAEA
                     RALVEQPSAGLCNEPTDAGSAELATATGLHRFLFTRIELEAGESLFLVTGYDSERAHF
                     QAPFDEAHATQLGSLGQHIEILLRNARLVSELERDKERLQIFNETLEHKVLARTAELA
                     RKNRDMRLVLDNVDHGFITLSPDGRMATERSLIVDTWFGPGGDSLLLSEYLEPLSESF
                     ATQFRLGWEQLVDGFMPLDASLAQLPARLVAAKETFTFRYSPFFRDAQLEGVLVIVSS
                     VTGQLAREREEAEQRELMQSFKQLMLDRAGFLDFMRETTTMMETIAAAAARGDRRALL
                     RTLHTLKGSSATVGLSRIARLCHAIEEGLKDEDELPTRELV"
BASE COUNT          710 a         1350 c         1345 g          685 t
ORIGIN      
        1 cacacctctg cgtcatcctc tttacggcct ttggcagcat ggagctcgcc gtcgaggcgc
       61 tccgcgccgg ggcgtacgac ttcgtcacga aaccggtagc gctcgacgtg ctgacactga
      121 ccttgaaacg cgcggcgctg cgacaggggg tcgggcggga cctacgcgaa gcgacgaccg
      181 ccgagacgcc cgtgatgttc ggcatggtcg gcagcagtgc ggccctgcag cgtgtattcg
      241 acgtgatcgg gcgcatcgcc cgcaccgaca ccgccgtgct gatccagggc gagaccggta
      301 cgggcaagga gctcgtcgcc cgggccattc acgagcaaag cgaacgcaaa ggtcgtttcg
      361 tcgccatcaa ctgttccgcc atgcccgagg gcttactcga gagcgagctc ttcggtcaca
      421 tggcgggcgc cttcaccgat gcgcgtgaag cgcgggccgg actcttcgtc gaggcgcgcg
      481 ggggcacggt cttcctcgac gaaatcggcg agatgcccgt cggcatgcag gcgaagctcc
      541 tgcgcgcact gcaggaaaag aaggtgcggc cgctcggagg cgcacgcgag attgccttcg
      601 atgcgcgcat cgtcacggcg acgaacagaa atttggcgga ggaggtcgaa gcgaagcgct
      661 ttcgcgccga tctctactat cgcgtcaacg tggtcaccgt cgacgtcccc tcgttgcggg
      721 atcgccccga cgacattctc ccgctcgcgc gttactttct cgggcgcttc aagcgtccag
      781 gtcacgagcc gcttcgactc ggccgcgccg tggccgagcg gctcgtcgcg tatgcgtggc
      841 cgggcaatgt ccgggagctc gagaactgca tcgagcgcgc cgtcgccttc gcgcagttcg
      901 acgaaatcac ggtggacgat ctgccgcccg aggtgaagct cgtgtgggac gacgcagcgt
      961 ccgacaactc gacgctcgac ttcgtcgaac gaaactacat tcagaaggta ctggaggcgg
     1021 tcagcggcga tacccgagct gccgccggca tcctcggctt cgataaccgc acgctacgcc
     1081 gcaagctggg ccttgcggac gtggagcgcg acggcgatgc gggctccggc gactccagcg
     1141 cttgagtacg tgcaacgcgc acgtgagtag tcacgcgcct ctgctgctcg tcatgcacac
     1201 gtcgagcgtc tcggtcagcg tggggggcgt ccgtgctaag tccgggcatg cgcaacgact
     1261 cgcggccacg tcagcaccgg cacgatcttc gcgtgatcgc tcgacgagcc atgctcgagc
     1321 gcggactcct gccggcattc tccgccgcag tcttgaagga gaccgtttcc ttcgccgacg
     1381 cggccggccc cgctgacccg tcgtgccgtg acgctcacac acgttcgctt acatcgcagg
     1441 tgatcaccgc caaaatcgtc gtcctccgcc gcagccgccc ctcaagccgt cagcagcgtg
     1501 gccgtagata gacgaaccct cgcttttttt gcgcgtggcg ttccgaggac aagatgagcg
     1561 tacatgcgac gacgtgcttt tcagaggagt cggattcgga agacgcgggt cgagcggtcg
     1621 gcggcagctt gcgccgagag ttcggagcgg agccgttaag agcggcgctc gtctacgcca
     1681 ccatcaacca cgacatggaa gagctcgtgg cgtcgattcg gcaggagctc ggccccgacg
     1741 tcccgttgat cgggtgttcg gtccaggggg tggtttcgaa cgacaagctc accgaagaag
     1801 ggtacgccgt cggcgtgatg ggtttcggcg ggagcgcgct cgcgacggcg acgacgaccg
     1861 ctcacgacat cgagctcgac tcgttcgaaa agggcaaagg catcgcccgc gacttgaaga
     1921 gccgtctcgg tcgcgagccg aagctcgtcg tgctctcgta cgatccgctt tgcggcaccg
     1981 acgtcgaggc gctgctacgc ggagcacaaa cggagctcgc ctgtcccatc gtgggcggcg
     2041 cagccgggca gccctggggc ccgccggttc gtacgtatca attcgacggc aaacaagtct
     2101 tctcgaaggg cgcagtggcg ctcgcgctcg cggggccgtt cgaggcggag ctcggcctct
     2161 gtcacggcac cgtgccgacc ggtctcacca tcaccgtcac caagaccgac ggcaaccgga
     2221 tcctcgaaat cgacggccgc cgggcgcacg acgtatggtg cgaacagacg ggcctcgacc
     2281 ccaaagccgg cgccgtgatt caccaggact gggtcgccag ctgggcgatc ggtgtcgaac
     2341 gacgctacca agctcccgga ccgaacggcc cgacggagca ggtcgttcgc atgatccgcg
     2401 gcgcgttcgg cgtcgacaac gagcagggtt ccatcatcct acaagccgcc gtgcccgaag
     2461 ggtcgaaggt gatgttccac caccgcgaag tctcgcagtt gctcgccggg acgaaagcga
     2521 tggggctcga gctcgcgggg cgtttgcagg gtaaaactcc ctgggcagtc ttgggcttcg
     2581 agtgcgccgc gcgcaccttt ccgttcctcg ggccggccaa cacgcgtgac gagcacgcgg
     2641 ggctgcgcaa cgccgtcgcc ccgaacactc cttggctcgg catgatggcc tggggtgagg
     2701 tcgcgccgct cggcggcgag ccggcgtttc acaactacac ctacccgctc gctgttttga
     2761 cgcgtcaggc gtaaagcacc agactgcgtc gagtgcccgt cgacgacgaa caattagttc
     2821 tgaaggagaa ggcgctgcag cttctccgca acgagcgcga gctctttgcg ctgcgcgcca
     2881 ggcacgagca aaccgtgtcc tggctgcgca tcctgcagtc gattccggag ctcatcgact
     2941 acaagcttgc gcggtccgag ctctgcaagc gcatcggcaa gagtctcatc acgggcttgc
     3001 gtgtccagcg cgctaatttc tttggctatc gcgacggcga gctcaggctg gtcagcggga
     3061 aagctgcgcc agagagggct tcgctcagcg cggaggctcg cgccttggtc gagcagccgt
     3121 cggcaggttt gtgcaacgag ccgaccgacg cgggcagcgc ggagctcgcc acggcgaccg
     3181 gactgcaccg cttcttgttc acgcgcatcg agctcgaggc cggcgagagt ttgttcctgg
     3241 tcactggcta cgacagcgag cgcgcacact tccaggcccc gttcgacgag gctcacgcga
     3301 cccagctcgg aagcctcggc cagcacatcg agatcttgct gcgcaacgcg agactcgtga
     3361 gcgagctcga gcgcgacaag gagcggctgc aaatcttcaa cgagacgctc gaacacaagg
     3421 tgctcgcgcg caccgccgag ctcgcccgca agaaccgtga catgcggctc gtgctcgaca
     3481 acgtggatca cggcttcatc acgctctcgc ccgacggacg catggcgacg gaacgctcgc
     3541 tcatcgtcga cacctggttc ggtccgggcg gagactcgct gctgctctcc gagtacctcg
     3601 agccattgtc cgagtcgttc gcgacgcaat tcaggctcgg ctgggagcag ctcgtcgacg
     3661 gcttcatgcc gctcgacgcg agcctcgccc agctcccggc gcggctcgtg gcggcgaagg
     3721 aaacgtttac gttccggtac tcgccgttct ttcgggacgc ccagctcgaa ggcgtgctcg
     3781 tgatcgtgag ctctgtcacg ggccaactcg cccgtgagcg cgaggaggcc gagcagcgcg
     3841 agctcatgca gagcttcaag cagctgatgc tcgatcgcgc cggctttttg gacttcatgc
     3901 gcgagacgac cacgatgatg gagacgatcg ccgccgcagc cgcacgcggc gatcgccgtg
     3961 cgctgctgcg tacgcttcac acgttgaagg gcagctcggc caccgtgggt ctgtctcgca
     4021 tcgcgcgcct gtgccatgcc atcgaagagg ggctgaagga cgaggacgag ctacccacgc
     4081 gagagctcgt
//
LOCUS       DATIML010000209         2188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_908637, whole genome shotgun sequence.
ACCESSION   DATIML010000209 DATIML010000000
VERSION     DATIML010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_908637"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="VLJ38_03690"
     CDS             complement(<1..683)
                     /locus_tag="VLJ38_03690"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HSU38638.1"
                     /translation="MIARQGMGTTVRKNDDFRVLARQRVPTGSERGYQAVLETVVNIV
                     RSTAKEAGVEPKSIPIGVGMPGSVTRIGGLIKNSNTECLNGKPFRQDLARTLGGRVLF
                     DNDANCFALAEARCGAARAYIDGVVFGVIMGTGVGGGIVARGRIWGGLQGLGGEWGHH
                     AVGPWRRLDAPEEEPISGTGLGERPICSCGKMGCVELYASGGGIEKEYRRRTGQSRRL
                     AELVERRAT"
     gene            complement(900..>2188)
                     /locus_tag="VLJ38_03695"
     CDS             complement(900..>2188)
                     /locus_tag="VLJ38_03695"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HSU38639.1"
                     /translation="VGAAIVDSMFAPGDDARIPVVAVTGTNGKTTTTRCIAHLLRQRG
                     LRVGMTCTDGIYVEGKRIDTGDCSGPKSARMVLGHPRVDIAVLETARGGMLREGLGFD
                     WCDVAVVTNVGEGDHLGMNGIHTPEELAAIKAIPVRRVSQRGVAVLNADDPLVASMAS
                     LCPGTVIFFSRDPNSAVIGRHRSAGGKAILAKEGHVVLADGRLERRVGSLSELPLTQG
                     GLVGFQIENLLAALGAGWGLGLPIEALRFGAETFESSLGTAPGRFNVVTHRDSTVILD
                     YGHNSSALLALTEAIRGMRHRRRKVVYTAAGDRRDEDIVRQAQILGSFFHEIYVYEDK
                     CTRGRPDGEVIRLMREGFAQADGAPRIVQLSGELRSIGAAIGSLEPGDLLLCQVDQVE
                     LALEFVTGLFRQAESRSLSSLAQLAAAALAALGMMG"
BASE COUNT          341 a          784 c          721 g          342 t
ORIGIN      
        1 tccgtcgcgc gtcgctcgac gagctcggcg agcctgcgtg actgccccgt gcggcgccgg
       61 tactccttct cgatgccgcc gccgctcgca tagagctcga cgcagcccat cttgccgcaa
      121 ctgcagatcg gacgctcgcc gaggccggtc ccggaaatcg gctcctcttc cggcgcgtcg
      181 agcctgcgcc atgggccgac ggcgtggtgg ccccactcac cgccgagccc ctgcaagccg
      241 ccccagatgc gtccgcgcgc gacgatgccg ccgccgacgc ccgtacccat gatgacgccg
      301 aacacgacgc cgtcgatgta cgcgcgcgcc gcgccgcagc gcgcctccgc gagcgcgaag
      361 cagttggcat cgttgtcgaa gagcacgcgg ccgccgagcg tgcgcgcgag atcctgacgg
      421 aatggcttac cgttcaaaca ctcggtattc gaattcttga tcagaccgcc gatgcgcgtg
      481 accgagcccg gcatgccgac gccgatggga atgctcttcg gctcgacgcc cgcttccttc
      541 gccgtcgagc gcacgatgtt caccaccgtc tcgaggacgg cttgatatcc gcgctcgctg
      601 ccggtcggca cgcgctggcg cgcgagcaca cggaaatcgt cgttcttgcg caccgtcgtg
      661 cccatcccct gccgcgcgat caccgctgct tctgttttcg tccccccgag gtcaaccccc
      721 aaagatataa gatcattcat cgatccgaga gactagcgtt cgcatcggcg ttcgcaaggc
      781 ccgactcggg cgcgcacgtg tctacgcagc gcactcgatg ccgtacgccc tcgtcattcc
      841 ggagggtgac gacggcgacc tctacccgtt tcgaaggcgc ccccggcgta cggcgacgct
      901 cagcccatca taccgagcgc ggcgagcgcg gcggcggcta gttgggcgag cgaggacagc
      961 gagcgcgact ccgcctgacg gaagagcccg gtcacgaact ccagcgcgag ctccacctga
     1021 tcgacctggc agagcagcaa atcgccgggc tcgaggctac cgatggcagc accgatcgag
     1081 cggagctctc cgctcagctg gacgatgcgc ggcgcgccgt ctgcctgcgc aaaaccctcg
     1141 cgcatcaagc gaatcacttc gccgtcgggg cggccgcgcg tgcacttgtc ttcgtaaacg
     1201 tagatctcgt ggaagaaact gccgaggatt tgcgcttggc ggacgatgtc ctcgtcgcgc
     1261 cggtcgcccg cggccgtgta gacgacctta cggcggcggt ggcgcatgcc gcggatggcc
     1321 tccgtgagcg caagcaacgc cgaagagtta tggccgtagt cgaggatgac ggtgctgtcg
     1381 cggtgcgtca cgacgttgaa gcgacccggc gccgtgccga ggctgctctc gaacgtctcg
     1441 gcgccgaacc gcagcgcctc gatcggcagg ccgaggcccc accccgcgcc cagcgcggcg
     1501 agcaggttct cgatttggaa accgacgagc ccgccttgcg tgagcggcag ctccgagaga
     1561 ctccccacgc ggcgctcgag gcggccgtcg gcgagcacga cgtgaccctc cttcgcgagg
     1621 atcgccttgc cgcccgccga ccggtgtcgc ccgatcacgg ccgagttcgg gtcgcggctg
     1681 aagaagatca cggtgccggg gcagagcgag gccatgctcg cgacgagcgg atcgtcggca
     1741 ttgagcacgg cgactccccg ctgcgacacg cgccgtacgg ggatcgcctt gatggcggcg
     1801 agctcttcgg gcgtgtggat cccgttcatg cccaggtgat cgccctcgcc gacgttcgtc
     1861 acgaccgcta cgtcgcacca atcgaagccg agtccttcgc gcagcatgcc gccgcgcgcc
     1921 gtctcgagca cggctatgtc cacacgcggg tggccgagca ccatgcgcgc gctcttcggg
     1981 ccgctgcagt cgccggtgtc gatgcgcttg ccctcgacgt agatgccgtc ggtgcacgtc
     2041 atgccgacgc gcaggccgcg ctggcgcaac aagtgcgcga tgcagcgcgt ggtcgtggtc
     2101 ttgccgttcg tgccggtaac ggcgacgacg gggatgcgcg cgtcgtcgcc cggcgcaaac
     2161 atcgaatcga cgattgcggc gccgacgg
//
LOCUS       DATIML010000210         3512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3796041, whole genome shotgun sequence.
ACCESSION   DATIML010000210 DATIML010000000
VERSION     DATIML010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3512
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3796041"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VLJ38_03700"
     CDS             <1..681
                     /locus_tag="VLJ38_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU38640.1"
                     /translation="KLLRVLEDRRFRPLGSEEELPLRARVIAATHVDLELAIAEGRFR
                     EDLYYRLNVVSIQVPPLAERGEDIVELLHAFGTQFQRKLRFSDPAVEWLRRRRWPGNV
                     RELRNAVERLALLSDAESIDVPELEELVGAQLGDGAREVDRMARAILALPARIGSKLD
                     LIERAVLHHAVEMCSGNKSAAARLLGVNRKSLERKLDRLSEPPELEERNPDEKAVLER
                     VQGEKPIQ"
     gene            complement(684..1907)
                     /locus_tag="VLJ38_03705"
     CDS             complement(684..1907)
                     /locus_tag="VLJ38_03705"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU38641.1"
                     /translation="MATAADASSSARRTALVTSWVAYATYYLGRKAFSAIKKPLEHEL
                     GLAPSALGAIDTAFLAAYALGQFASGILGDHIGARRLVGWGMLVSAVACAGFGLSRAA
                     FILAAWFVLNGLAQSTGWPGTTRVVAEWTTPENRGTVMGLWSTCYQVGGLVATPLAGA
                     LAVHFGWRSALFVPALALALVGTVVLVTLPAPTASPETASTGSSVARAQLGVLASRTL
                     WLFGSSYFFVKLVRYALLFWLPYYLATAEGYTTEKAANVSIAFDAGGIIGVVLIGRIA
                     DRSRKLSRQALSALWILLLVPVLWIYARIGSGSVWLDVLVLALLGALLFGPDSLLAGA
                     AAQDAADPAAAATATGFVNGLGSFGALVQGIVVPPIAAAYGWRALFPSLALFAFGAAV
                     ALVPTLRATKPPSAP"
     gene            complement(1891..2523)
                     /locus_tag="VLJ38_03710"
     CDS             complement(1891..2523)
                     /locus_tag="VLJ38_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38642.1"
                     /translation="MLARRLCFVVALAACGSPPLPREPAEAAPARAEQQPARDPCEPV
                     DGQPPAPVTGSYTGVLKSARCQAEVLAIMNSVAKALGTGCEHCHDVMDYAAPSENKRV
                     ANWMASELVPRLAKRSGGAITCGDCHADDGKGKTKILGAPRSRTRAVEWMTARLVERF
                     DAAAGGPLYCKACHVGQLGTPAFQGRVILTEHLPPLPPALPGTVPHGDGS"
     gene            2701..>3512
                     /locus_tag="VLJ38_03715"
     CDS             2701..>3512
                     /locus_tag="VLJ38_03715"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSU38643.1"
                     /translation="MTRAGVLAAVCAAFACAAPPPGPPAATPVSAPASVAPSVTAAPE
                     QPPLHVKILGFNDFHGQLSPKRELGRPIGGAAVLAAYLRAALAGREDHTFIVHAGDFV
                     GASPPNSGLLQDEPSLDFLNTLAAASSCDGAPARGCHVIGGLGNHEFDEGKDELLRLL
                     RGGNYRTGPFLDDPWRGARYEVVCANVVERATGKPLLPPYAIRAVEGVPIAFIGAVLK
                     AAPSIVNPSGVADLTFLDEADAVNAYVPELARQGVRAIVLQIHQGDTQAPYAG"
BASE COUNT          566 a         1217 c         1250 g          479 t
ORIGIN      
        1 aagctgctcc gtgtgctcga ggatcggcgc ttccgcccgc tcggcagcga agaagagctg
       61 ccgctccgag cgcgcgtcat cgccgcgacg cacgtcgatc tggagctcgc gatcgcggaa
      121 gggcgctttc gtgaggacct ctactaccgc ctcaacgtcg tctccattca ggtgccgccg
      181 ttggcggagc gaggcgagga catcgtcgag ctcttgcacg cgttcggcac gcaatttcaa
      241 cgcaagctgc gcttctccga ccccgcggtc gagtggctgc gccgccggcg ctggccgggc
      301 aacgtgcgcg agctcagaaa cgcggtcgag cgtctcgcgc tcttgtcgga cgccgagtcc
      361 atcgacgtgc ccgagctcga agagctcgtc ggggcgcaac tcggcgacgg cgcgcgcgag
      421 gtcgatcgca tggcgcgcgc catcctggcg ctgccggctc gcatcggctc gaagctcgac
      481 ctcatcgaac gcgccgtgct gcaccacgcg gtcgagatgt gcagcggcaa caagagcgcc
      541 gccgcgcgct tgctcggcgt gaaccgcaag tccctcgagc gaaaactgga ccgcctctcc
      601 gagccgcccg agctcgaaga gcgcaacccg gacgaaaaag cggtgctcga gcgcgtgcag
      661 ggcgaaaagc ccatccagta gcgtcagggc gcgctcgggg gcttggtcgc gcgcagcgtg
      721 ggaacgagcg cgacggcagc gccgaacgca aagagcgcca gcgagggaaa cagcgcgcgc
      781 cagccgtagg cggcggcgat cggcggcacg acgatacctt gcacgagcgc cccgaaggag
      841 ccgaggccgt tgacgaagcc ggtcgccgtc gcggccgcgg ccgggtccgc ggcgtcttga
      901 gcggccgcgc ccgcgagtag ggaatccggc ccgaacaaga gcgcgccgag cagcgcgagc
      961 acgagcacgt cgagccagac gctgccggag ccgatgcgcg cgtagatcca gagcacgggg
     1021 acgagcagga ggatccagag cgcggagagc gcctgacgac tcagcttccg gctgcgatcg
     1081 gcgatgcgac cgatcagcac gacgccgatg atcccgcccg cgtcgaaggc gatcgagacg
     1141 ttcgccgcct tttcggtggt gtagccctcc gccgtcgcga gatagtacgg cagccaaaac
     1201 aagagcgcgt agcgcacgag cttgacgaag aagtagctcg agccgaagag ccagagcgtt
     1261 cggctcgcga gcacgccgag ctgggcgcgc gcgacggagg acccggtcga ggctgtctcc
     1321 gggctcgctg tcggcgcggg cagggtcacg agcaccaccg tgcccacgag cgcgagcgcc
     1381 agcgccggaa cgaagagggc ggagcgccaa ccgaagtgca cggcgagcgc gccggcgagc
     1441 ggcgtcgcga cgaggccgcc gacctggtaa caggtggacc agagtcccat cacggtgccg
     1501 cggttttccg gcgtggtcca ttcggcgacg acgcgcgtcg tgccgggcca gcccgtcgac
     1561 tgcgcgaggc cgttcagcac gaaccaggcc gccaaaatga acgcggcgcg cgacaagccg
     1621 aaccccgcgc aagcgacggc cgagacgagc atgccccagc cgacgagacg ccgcgcgcca
     1681 atgtggtcgc cgaggatgcc gctcgcgaac tgcccgagcg cgtaggcggc gaggaacgcc
     1741 gtgtcgatgg cgccgagcgc cgacggagct agcccaagct cgtgctcgag cggctttttt
     1801 atcgcgctga acgctttgcg gccgagatag tacgtggcgt aggcgaccca gctcgtgacg
     1861 agcgcggtgc ggcgagcgct cgaagacgcg tcagctgccg tcgccatgcg gaaccgttcc
     1921 gggcagagcg ggcggcagcg gcggcagatg ctccgtgagg atcacgcggc cctggaaggc
     1981 cggcgtgccg agctggccca cgtggcacgc tttgcaatag agcggcccgc cggcggccgc
     2041 gtcgaagcgc tcgacgagac gcgccgtcat ccattcgaca gcgcgggtgc gactgcgcgg
     2101 cgcgccgagg atcttggttt tgcccttgcc gtcgtcggcg tgacaatccc cgcacgtgat
     2161 cgccccgccc gagcgcttcg cgagtcgcgg cacgagctcg ctcgccatcc aattcgccac
     2221 gcgtttgttc tcgctcggcg ccgcgtagtc catcacgtcg tggcagtgct cgcagccggt
     2281 accgagtgcc ttggcgacgc tgttcatgat ggcgagcact tccgcctgac agcgcgcgct
     2341 cttgagcacg cccgtgtaac tgcccgtgac gggcgcgggc ggctggccgt cgaccggttc
     2401 gcacggatca cgcgccggtt gctgctcggc gcgcgcgggc gcagcttcgg ccggttcgcg
     2461 cggcaacggc ggactaccgc acgccgcgag cgcgacgacg aagcacaggc ggcgtgcgag
     2521 cacggccgca cgatagccga gaaagctcgg aaaacgtcgg ctcagttgcc gtgcgcggcg
     2581 gcttgatcta acgcggaacg ccgacgcttt tgacgatgat ggctgctttc gaagcccccc
     2641 actccggtga ccccgtcgca tgctgagcgg cacgctcgga cgcgccgtca gcgagcaccg
     2701 gtgacgcgcg cgggggtgct cgccgccgtg tgcgcggcgt tcgcgtgtgc ggcgcccccg
     2761 cccggtccac ccgcagccac gcccgtaagc gcgccggcga gcgtcgctcc aagcgtaacg
     2821 gccgcgcccg agcagccgcc gcttcacgtc aaaatcctcg gcttcaacga ttttcacggc
     2881 cagctttcgc cgaaacgaga gctcgggcgt ccgatcggcg gcgcggcggt gctcgcggcg
     2941 tacttgcgcg ccgcgctggc cgggcgcgag gaccacacgt tcatcgtgca cgcgggtgac
     3001 ttcgtcggcg cgtcgccgcc caattcgggc ctactccagg atgagccgtc gctcgacttt
     3061 ttgaacactc tcgccgcggc gagctcgtgt gacggcgcgc cggcccgcgg ctgtcacgtc
     3121 atcggcgggc tcggcaatca cgagttcgac gaggggaagg acgagctctt gcgcctgctg
     3181 cgcgggggga attaccgcac ggggccattt ctcgacgacc cctggcgcgg cgcgcgctac
     3241 gaggtcgttt gcgcgaacgt cgtcgaacgc gcgactggta agccgctgct gccgccgtac
     3301 gcgatccgcg ccgtggaggg cgtgccgatc gcgttcatcg gcgccgtgct caaggccgca
     3361 ccgagtatcg tcaacccgag cggcgtcgcc gacctcacct ttctcgacga agcggacgcg
     3421 gtcaacgcgt acgtgcccga gctggctcga caaggcgttc gggccatcgt gcttcagatc
     3481 caccagggtg acacgcaggc gccgtacgcg gg
//
LOCUS       DATIML010000211         2351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2930663, whole genome shotgun sequence.
ACCESSION   DATIML010000211 DATIML010000000
VERSION     DATIML010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2930663"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1172
                     /locus_tag="VLJ38_03720"
     CDS             <1..1172
                     /locus_tag="VLJ38_03720"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: protein motif:HMM:NF004679.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HSU38644.1"
                     /translation="GSSATARSANNVSSTNPAPEAERRLRRVGVLGAGQLGLMLGLAG
                     RPLGLEFLFVDPAADPPAKSVGEHLALDYGSPAALEQLATCEVVTYEFENVAVEAVQA
                     VSSLTRVYPPASALAVAQDRLHEKTCFAELGIPTAPFFNVESRDDLVRALAGIGYPAV
                     LKTRRFGYDGRGQAVLQTLVDAERAYAELGRVPLLLEGFVPFERELSLIGARSASGDI
                     RFYPLVENHHRGGILRLTLAPAPNVTAERQAMAEGYMRAIFERLGYVGVLALELFQAG
                     GRLVANEMAPRVHNSGHLTLEGARTSQFEQHLRAVLDLPLGSTELIEPSAMLNCIGSL
                     PAPAAVLAVTDAHLHDYGKAARAGRKVGHVTVRAPTIELLAERLALLRPMIESAP"
     gene            1169..2011
                     /locus_tag="VLJ38_03725"
     CDS             1169..2011
                     /locus_tag="VLJ38_03725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38645.1"
                     /translation="MKNGLGFAAALLALVFTPSAFGQTVQGQATGTATYPANPAYNPA
                     YQPAPAYYPPPKPIENIGRTGQFIFGIDRISGLFIDHETLSYKDPVTRVETKSTYQST
                     TFGALGVASHSPSALPRFAFDYVLFQGLTVGGSFMLSTRGMSVSGNGPKSLAPTTAND
                     DGLTVFGTARVGYAYAFDSTFALWPRLGLAYASSTSRGEIIDPATAKSLGSYETKSHV
                     GTLNFEALFAVSPIQHIVVTGGPYLDLGLGGGYTLLRESTEIDSRDAKLTSYGLIFNA
                     SGYY"
BASE COUNT          391 a          839 c          719 g          402 t
ORIGIN      
        1 aaggctcgag cgctaccgcg cggagcgcaa acaacgtgtc ctcgacgaac ccagcccccg
       61 aagctgagcg ccggctccgg cgcgtcggcg tgctcggtgc ggggcaactc ggcctcatgc
      121 tcggcctcgc ggggcgcccg ctcgggctcg agtttctgtt cgtggatccg gctgccgatc
      181 cgcctgcgaa atcggtcggt gagcacctgg ccctcgacta cggctcgccc gcggcgctcg
      241 agcagctcgc gacgtgcgag gtcgtcacct acgagttcga gaacgtggcg gtcgaagccg
      301 tgcaggcggt ttcgagcctc acgcgcgtct acccgccggc ctccgcgctc gcggtcgcgc
      361 aggatcgact ccacgaaaag acgtgtttcg ccgagctcgg catcccgacg gcgccgttct
      421 tcaacgtcga gagtcgcgat gacttggtgc gcgccctcgc cggaatcggc taccccgcgg
      481 tgctcaagac gcgccgcttc ggttacgacg gccgcgggca agccgtgctg cagacgttgg
      541 tcgacgccga acgcgcgtac gcggagctcg gacgagtgcc gctcttgctc gagggcttcg
      601 tgccgttcga gcgtgagctg agcctcatcg gcgcgcggag cgcgagcgga gacatccgct
      661 tctacccgct cgtcgaaaat catcatcgcg gcggtatttt gcgcctgacg ctcgcgcccg
      721 cgccgaacgt gacggccgag cgccaagcga tggccgaagg ctacatgcgc gccatcttcg
      781 agcggctcgg ctacgtcggc gtgctcgcgc tcgagctctt tcaagcgggg ggccggctcg
      841 tcgcgaacga aatggccccc cgcgtccaca actcgggcca cctcacgctc gaaggcgcgc
      901 gcacgagcca attcgagcag cacctgcgcg ccgtgctcga tctgccgctc ggctcgaccg
      961 agctcatcga accgagcgcg atgttgaatt gcatcggctc gctgcccgcg cccgccgccg
     1021 tgctcgccgt cacggacgcg catcttcacg actacggcaa ggccgcgcga gccggtcgca
     1081 aagtcggcca cgtcaccgtg cgcgcgccga cgatcgagct actcgcggaa cggctggcgc
     1141 tcctcaggcc catgatagag tccgcgccat gaaaaacggc ctcggcttcg ccgctgcact
     1201 cctcgctctc gtgttcactc cgagtgcctt tggacagacc gtgcaaggcc aagcgaccgg
     1261 gacggcgacc tatccggcca atcccgccta caatccggcg tatcagcccg cgcccgctta
     1321 ttatccgccg ccgaagccga ttgaaaacat cggccgcacg ggccaattca tcttcggcat
     1381 cgaccgcatc agcggtctct tcatcgatca cgagacgctc tcttacaaag accccgtcac
     1441 gcgcgtggag accaagtcca cctaccagtc gacgacgttc ggagcgctcg gcgtggcgag
     1501 ccatagtccg tcggcactcc cgcgcttcgc gttcgactac gtcctctttc agggtctcac
     1561 cgtcggcggc agcttcatgc tctcgacgcg cggcatgtcg gtgagcggca acgggccgaa
     1621 gtcgctcgcg cccacgacgg caaacgacga cggcctcacc gtgttcggca cggcgcgcgt
     1681 cggctacgct tacgccttcg actccacgtt cgcgctctgg ccgcgcctcg gactcgcgta
     1741 cgcctcgagc acctcccgcg gtgaaatcat cgatcctgcg accgccaaat cgctcggtag
     1801 ctacgagacc aagtcgcacg tcggcacgtt gaacttcgag gccctcttcg ccgtttcgcc
     1861 gatccagcac atcgtcgtga ccggcggccc gtacctcgac ctcggcctcg gcggcggcta
     1921 cacgctgctc cgagagagca ccgagatcga cagccgcgac gcgaagctca cttcgtacgg
     1981 gctgattttt aacgcatctg gctattactg agcggtcact ccgcctgcgc tggaatggaa
     2041 tctcgatgtc attccgccag ttagcgaagc actgcgaata ctcgagcgaa tctttgacac
     2101 cctgagtcgc gcgggtgtag gtaagcgcca cacacgctct cacttcgatc aggaggagat
     2161 aaccatgcga accctgcgaa agctgctcga gcgactccgt ctcccgtttc cggtcctggc
     2221 ctgagccaga gagtagccgg ccccgtgaac ggtggccgcg aacactccga tccgaagacc
     2281 gggctgtgcg cgacctgtcg ccacagaaga acggtgcgtt cggcgaaggg ctccgttttc
     2341 accctgtgtg a
//
LOCUS       DATIML010000212         2838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1486764, whole genome shotgun sequence.
ACCESSION   DATIML010000212 DATIML010000000
VERSION     DATIML010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1486764"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VLJ38_03730"
     CDS             <1..475
                     /locus_tag="VLJ38_03730"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HSU38646.1"
                     /translation="PVLAVGSTVRVKKTGTLATVEAPPERGSVRLRAGAIRLTLSLEE
                     VEPAKGSPRPKTPKAAPRARARPTTLPAAVRTPTNTLDLRGTRVDEALGRLDAFLDVM
                     LGEGEPVGFVLHGHGTGAIKAAVREHLAASSYIEQSRAAEPDEGGDAFTVFWLRE"
     gene            770..2629
                     /locus_tag="VLJ38_03735"
     CDS             770..2629
                     /locus_tag="VLJ38_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002638101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HSU38647.1"
                     /translation="MGPQSAGYLAKLAVAALGVVFGDIGTSPLYSMRVCVQGAHLPIN
                     HANVLGVLSLIFWSLTLIVAVKYVFYVLRADNKGEGGILSLSALATSVARGSRLRPFV
                     VACGVFGAALLYGDGAITPAISVLSAVEGLEVAAPRLAPFVIPITLVILVGLFWLQKR
                     GTASIGAVFGPIMLLWFFTLSLLGVYRLGSNLSVLAAVSPTYAVSFMVAQGRESIVVL
                     GAVFLVVTGGEALYADLGHFGRKPIQLGWFAVAFPALLLNYFGQGALLLADPTTAENP
                     FFRMAPSWALYPLVALSTAATVIASQALITGVFSLTQQATMLGFLPRIEVRHTSAHER
                     GQIYVPTMNWLLMLATVSLVLSFKSSDALAAAYGIAVTLTMVITTILAGMYARRGWHW
                     RLERVVLLTVVLLVPETVFLISNLAKFLDGGFVPIAIGVGLFVVMMTWRRGREILFRR
                     FQEDLLPLTDFFDLLRVEIPARVPGTAVFMTASGDGTPPALLRNFMHNRVLHQHIVLL
                     TIKTTESARVAEEDRFVVEHLEHGFSRVTGRYGFMEQPDAPTLLERAGLVSSVEHTTF
                     FLGRENLISSQHPGMARWRIRVFATLTRNAQPANKFFNIPSDRVMEIGAQIEL"
BASE COUNT          430 a          992 c          893 g          523 t
ORIGIN      
        1 cccggtgctc gcggtcggct cgaccgtgcg tgtgaagaag acgggcacgc tcgccaccgt
       61 cgaagcgccg cccgagcgcg gctccgtccg tctgcgcgcc ggcgcgatac gcttgactct
      121 ctcgctcgag gaagtcgagc cggccaaagg ctccccgcgc ccaaagacgc ccaaagccgc
      181 accgcgcgca cgcgcgcggc ccacgacgtt gccggccgcg gtccgcaccc ccacgaacac
      241 cctcgatctg cgaggcacgc gggtggacga agcgctcggc cgcctcgacg cgtttctcga
      301 cgtcatgctg ggcgagggcg agcccgtcgg gttcgttttg catggacacg gtactggcgc
      361 gatcaaggcc gccgtgcgtg agcatctcgc cgcatcgagc tacatcgagc agagccgcgc
      421 cgccgagccc gacgagggcg gcgacgcctt caccgtcttt tggctccgcg agtgacgacg
      481 gctgcgggct gcgccagcgc gtagacgacc accgcgttaa agaaccctta tgtttccacc
      541 gtgaccatcc gcgccgcggc tggaaccagt gacagcgccg ttgcctcgcg gtacgaatcc
      601 cggcatgtcg gacccagcgg ccgcgaacac ggccggtgcg acgcgtacga acaccgcttc
      661 cctcgcggcg gaatcaaaca agcccacggc gtcgctcgag cccaaagccc cagcgcgtgc
      721 cgcagcgccg ccgatcgctc cgtcgagcgc gacgggacac gagaggcctg tggggccgca
      781 aagcgcaggc taccttgcga aactcgcggt cgccgcgctc ggcgtcgttt tcggcgatat
      841 cggcacgagc cccctgtact cgatgcgcgt gtgcgtccag ggcgcccact tgccgatcaa
      901 ccacgcgaac gtacttggcg ttctatcgct gattttttgg tcgctcacgc tgatcgtcgc
      961 ggtgaaatac gtgttctacg tgctgcgcgc cgacaacaag ggcgaggggg gtattctgtc
     1021 gctctccgcg ctcgcgacgt ccgtcgcgcg cggctcgcgc ctgcggccgt tcgtcgtcgc
     1081 gtgcggcgtg ttcggcgcag cgctcctcta cggtgacggc gcgatcacgc ccgccatctc
     1141 cgtgctcagc gccgtcgaag gtctcgaggt cgccgctccg aggctcgcgc cgttcgtgat
     1201 tccgataacg ctcgtgatcc tcgtcggact cttctggctg caaaagcgcg gcacggcgag
     1261 catcggtgcc gtgttcgggc cgatcatgct gctctggttc ttcacgctct cgctgctcgg
     1321 cgtgtatcgc ctcggctcga acctgagcgt gctcgccgcc gtgagcccga cctacgccgt
     1381 gagcttcatg gtcgcgcagg gacgcgagag catcgtcgtg ctgggcgccg tcttcctcgt
     1441 cgtcacgggc ggggaggcgc tctacgccga cctcggccat ttcgggcgca agccgattca
     1501 gctcggttgg ttcgcggtcg cgtttcccgc gctgctgctc aactatttcg gccagggcgc
     1561 gctcctgctc gcggacccca cgaccgccga aaacccgttc tttcgcatgg caccgagctg
     1621 ggcgctctac ccgctcgtag cgctctcgac ggcggcgacg gtgatcgctt cgcaggcgct
     1681 catcaccggc gttttctcgc tcacgcagca ggcgacgatg ctcggctttt tgccgcgcat
     1741 cgaggtccgg cacacgagcg cccacgagcg cggacaaatc tacgtcccca ccatgaactg
     1801 gctcttgatg ctggcgacgg tgagcctcgt cttgagcttc aagagctccg acgccctcgc
     1861 cgcggcctac ggcatcgccg tcacgctcac gatggtgatc acgaccatcc tcgccggcat
     1921 gtacgcgcgc cgtggctggc actggcggct cgaacgcgtc gtgctcttga ccgtggtcct
     1981 gctcgtaccg gaaacggtgt ttttgatctc gaacctcgcc aagttcctgg acggcggctt
     2041 cgtcccgatc gcgatcggcg tcggcttgtt cgtggtgatg atgacctggc ggcgcgggcg
     2101 ggaaattctt ttccggcgct tccaagaaga cctcctgccg ctcaccgatt ttttcgatct
     2161 cctgcgcgtc gagatcccgg cgcgcgtccc ggggacggcg gtgttcatga cggcgagcgg
     2221 cgacggcact ccacccgcgc tcttgcgcaa cttcatgcac aaccgcgtgc tccaccaaca
     2281 catcgtgctg ctcacgatca agacgacgga gagcgcgcgt gtcgcggagg aagatcgttt
     2341 cgtcgtcgaa cacctcgagc acggtttcag tcgcgtgacc ggtcgctacg gtttcatgga
     2401 gcagcccgac gcgccgacgt tgctcgaacg ggccggcctg gtttcgagcg tcgagcacac
     2461 gacgttcttc ctaggccgcg aaaatctgat ttcgagccag cacccaggca tggcgcgctg
     2521 gcgcatccgg gtgttcgcga cactcacccg aaacgcgcag cccgcgaaca agttcttcaa
     2581 catcccctcg gaccgcgtca tggaaattgg cgcgcaaatc gagctctgac cgaatccgtc
     2641 tgccgaatcc tcctacagcg gcgacttgcg tggggcggct tcacgtctta ggttcgcgcc
     2701 accgtgcaca gcgctgaatg gatcggtctg cttatcgtcg tcgtcaccct ggcgttccag
     2761 gcgcgcacga ccctgaaggt ttggcggtcg aaactcttcg atcgctcgca gaagatcgcg
     2821 cagagccagt tgatttgg
//
LOCUS       DATIML010000213         2737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_332430, whole genome shotgun sequence.
ACCESSION   DATIML010000213 DATIML010000000
VERSION     DATIML010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332430"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VLJ38_03740"
     CDS             complement(<1..941)
                     /locus_tag="VLJ38_03740"
                     /inference="COORDINATES: protein motif:HMM:NF015043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016702 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of two atoms of oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HSU38648.1"
                     /translation="MSLADATTLPFHLRGAFAPVLEERTDFELEVTGEIPGELAGTYV
                     RNGPNPRRASPAWFAGEGMLHAVHLEGGRAAWHKNRWIQGPYAPNTHVVAYGERLLAL
                     VESRRAVEVTRELETVGVFDFHGAVARSMTAHPKLCPHTGELLFFSYGATPPLLTYYR
                     ADAGGHVVHTAELDVGVATFMHDFAVTQNYVVFYVLPVLLGDFRSPVPIRWSDAVPAR
                     IAVLPRDGGNSDLRWFDVAPCTISHTVNAFEDGGTIVLDAVRAPRIMRPHALHRFRLD
                     LRTGLAAESELCPRFLDFPRVAPAVVGARQRYAYVTEL"
     gene            1014..1676
                     /locus_tag="VLJ38_03745"
     CDS             1014..1676
                     /locus_tag="VLJ38_03745"
                     /inference="COORDINATES: protein motif:HMM:NF024701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSU38649.1"
                     /translation="MRQALVEAALRALERQGLAELSLRALGRELGVSPRAPYRHFQTK
                     ETLLAAVAVEGLRRFEAFVTPRVAAVGPDPIAKLCAVAEAYVLFAVEHPAAFRVMYAP
                     YATVEEDAPELVRARAEGHRANLELIVAAQAAGLLRPGDPMHHALAFWTSTHGLAVLL
                     VEGQLGRYDRPIDALKLSALVSRLLLEGLLAAPGSGSTGPNRPSAARERSQRRVKARS
                     PR"
     gene            complement(1686..2348)
                     /locus_tag="VLJ38_03750"
     CDS             complement(1686..2348)
                     /locus_tag="VLJ38_03750"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HSU38650.1"
                     /translation="MGNVLYVGNQNYSSWSLRPWLVLTWGGISFETRLIQLGGPGYAK
                     RQMPSVLAVSPTGTVPVLHTDGEVIPDSLAIAEWAAERVRALWPADPVARMHARAAAC
                     EMHSGFGALRSKTPCNIRRRAEPRTFGADVLHDVARLETLWGTLRGRFGAGGPYLFGA
                     TPTITDAFFTPVATRFRTYRIPASSETQRYLDALLAEPAFKRWEEGAAREPFGMPEWD
                     DA"
     gene            2409..>2737
                     /locus_tag="VLJ38_03755"
     CDS             2409..>2737
                     /locus_tag="VLJ38_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38651.1"
                     /translation="MKLLLQAFLCALACTSTALRAGAVPGPGVEPAPVPAKAKVDAPA
                     ALPADSAPAPKANAWTEHFTLGGGIALYFYQPTNGWDSQFLVYSNLRFDAQFQPFGLH
                     FEPRLSN"
BASE COUNT          447 a          935 c          926 g          429 t
ORIGIN      
        1 agctccgtca cgtaggcgta acgctggcga gccccgacga cggccggcgc tacgcgtgga
       61 aagtcgagaa aacgcggaca gagctcgctc tcggccgcga gccccgtgcg caaatcgaga
      121 cggaagcgat gcagcgcgtg aggccgcatg atgcgcggag cccgcacggc gtcgagcacg
      181 atcgtgccgc catcctcgaa cgcgttcacg gtgtgcgaaa tcgtgcaggg tgcaacatcg
      241 aaccagcgaa ggtccgagtt tccgccgtcg cgcggcagca cggcgatgcg cgcggggaca
      301 gcgtccgacc aacgaatcgg cacgggtgag cgaaaatcgc cgagcagcac gggcagcacg
      361 tagaagacga cgtagttttg cgtcacggca aagtcgtgca tgaacgtcgc cacgcccacg
      421 tcgagctccg ccgtgtgcac gacgtgcccg cccgcgtcgg cgcgatagta cgtgagcagc
      481 ggcggcgtcg cgccgtacga aaagaacagt agctcacccg tgtgcgggca gagcttcgga
      541 tgagccgtca tcgaacgcgc taccgcgccg tggaagtcga agacgcccac cgtttcgagc
      601 tcgcgcgtga cttcgacggc gcgccggctc tcgaccagag cgagcagccg ctcgccgtac
      661 gcgacgacgt gcgtgttcgg cgcgtacggt ccctggatcc aacgattctt gtgccaagcg
      721 gcgcgacctc cctccaggtg cacggcgtgc agcatgccct cgcccgcgaa ccaagccggc
      781 gaggcgcgcc tcgggttcgg gccgttacgc acgtaggtgc cggcgagctc gcccgggatc
      841 tcgcccgtga cctcgagctc gaaatccgtg cgttcctcga gcaccggagc gaaggcgccc
      901 cgcaggtgaa agggtagggt agtcgcgtca gccagagaca tgtattcatc gtatacttaa
      961 aggccatcct gtccagctca cgtaaaaagc ccggcaatta tcatcacggc gacctgcgcc
     1021 aggcgctcgt cgaggcggcg ctgcgcgcgc tcgagcggca gggcctcgcg gagctttcgc
     1081 tgcgcgcgct cggtcgcgag ctcggcgtga gcccgcgcgc cccctatcgc cactttcaaa
     1141 ccaaagaaac cctactcgcg gccgtggcgg tcgaaggcct gcggcgattc gaggctttcg
     1201 tcacgccccg cgtggccgcc gtgggtccgg atccgatcgc gaagctttgc gccgtcgccg
     1261 aggcgtacgt gctttttgcg gtcgagcatc cggcggcgtt tcgcgtgatg tacgcgccct
     1321 acgccacggt cgaggaagac gcgcccgagc tcgtgcgagc gcgcgccgaa ggtcaccgcg
     1381 cgaacctcga gctcatcgtc gccgcccaag cagcgggcct gctgcgcccc ggcgatccca
     1441 tgcaccacgc gctcgcgttc tggacgagca cgcacggcct tgccgtcttg ctcgtcgaag
     1501 gtcagctcgg tcgctacgat cgaccgatcg acgccctcaa actctcggcg ctcgtgagcc
     1561 ggctcctgct cgaggggttg cttgcggccc cggggtccgg ctcgaccggg ccgaaccgtc
     1621 cgagcgccgc acgggagcgc tcgcagcggc gcgtgaaggc gcgttccccg cgctgagcgc
     1681 cgtgctcagg cgtcgtccca ctccggcatg ccgaagggct cgcgcgcggc gccttcttcc
     1741 cagcgtttga aggcgggttc ggcgagcagg gcgtcgaggt agcgctgcgt ttcggagctg
     1801 gcggggatgc ggtaggttcg aaagcgggtc gcgacgggcg tgaaaaatgc gtcggtgatc
     1861 gtgggcgtgg ctccgaacag gtacggaccg cccgcgccga aacggccgcg gagcgtgccc
     1921 cagagtgtct cgagtcgtgc cacgtcgtga agcacgtccg cgccgaaggt gcgcggctcg
     1981 gcgcggcgac ggatattgca tggcgttttg gagcgcaagg ctccgaagcc cgagtgcatt
     2041 tcacaagccg ccgcgcgagc atgcatgcgc gcgacgggat cggccggcca gagcgcacgc
     2101 acgcgttcgg ccgcccattc cgcgatcgcg agcgaatcgg ggatgacctc gccgtcggtg
     2161 tgcagcacgg gcaccgttcc cgtcggcgag acggcgagta cgctcggcat ttggcgcttg
     2221 gcatagcctg gcccaccgag ttgaatcagc cgtgtttcga aggaaatgcc gccccaggtg
     2281 agcacgagcc agggcctgag cgaccacgag gaatagttct ggttgccgac gtagagtacg
     2341 tttcccacgg ggcttcgtag cgtcctttcc gcgccgccgc aatccgcctg cacgctcact
     2401 cttgcatcat gaaactcttg ctgcaggcct ttctttgcgc gctcgcctgc acctcgacgg
     2461 cgcttcgcgc aggcgcggtg ccggggcctg gcgtagagcc ggcgcccgtg cctgccaagg
     2521 cgaaggtcga cgcgccggct gcgctccccg ccgacagcgc gcccgcgccc aaagccaacg
     2581 cgtggaccga gcacttcacg ctcggcggcg gcatcgccct ttacttctac caaccgacga
     2641 acggctggga cagtcagttc ctcgtctatt cgaacttgcg cttcgatgcc cagtttcagc
     2701 cgttcggcct gcacttcgag ccgcgactga gcaacga
//
LOCUS       DATIML010000214         2306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2641811, whole genome shotgun sequence.
ACCESSION   DATIML010000214 DATIML010000000
VERSION     DATIML010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2641811"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VLJ38_03760"
     CDS             complement(<1..987)
                     /locus_tag="VLJ38_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38652.1"
                     /translation="MSIRFVAAVACGGMLLGVAAGAHAQLAVSASNVSVDFAGFTGAG
                     IVAAPSAGQLSSLAWSVTGLSDGNLDFGANGTSSDFGRGTSTGGVTNGGIYAFDTGAG
                     HVVLGIQPTDADFTPGSLSARFKNSLTRPLLSVGVSYKIWVFADEAHSSSFDFSWSTD
                     NVTFTSVPALDFTSDGPIPTTPAWRSYDQATTLALNVPPGGYLFLRWTSDDAGGTGAR
                     DEIGLDAVTLNVNAVCGDGHLDGSEACDDGNQDNTDGCLTACVLPRCGDGYVEQGVEQ
                     CDPTLGSSIDPACCSLTCLFTAGNSCAGGLCQSGQCVPSAAGGAGGGTAGGAG"
     gene            complement(1054..>2306)
                     /locus_tag="VLJ38_03765"
     CDS             complement(1054..>2306)
                     /locus_tag="VLJ38_03765"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSU38653.1"
                     /translation="AKALIVVDDPERPASAPADWKAPAEAALPSLTPEGYGDAGLAVA
                     VLARDVGHPLLERLARKERIDAKLDLELKSVTAEAFNVVGRIRAGVPANRRRPGALVI
                     GAHYDHLGYGGRYSLAPGNTAPHVGADDNASGVAGLLEIARLLAAQREKLERDVIVVA
                     FSGEEAGLLGSSHFVRTSEAGKNPALPKHGAFAMLNLDMVGRLRENRVQVLGGETATE
                     WEELVPKACSTARIECALAADGGYGPSDQMSFFVGGVPVLHFFTGAHADYHKPSDTPD
                     KINAAGLGQIALAVSELVKTLGAQQTPMHVNPGLKAAPPRGDLRSFNASLGTIPDYAG
                     PGPGKSGVLLGGVRPGGAAEKAGMRHGDLMVRLGAHDISSIEDFMYVLNASKPGETTK
                     VVVIRDGRRLELDVTFQEGPSHSR"
BASE COUNT          343 a          792 c          791 g          380 t
ORIGIN      
        1 gccggcgccg cccgccgttc ctccgccggc gccgcccgcc gcgctcggga cgcactggcc
       61 gctctgacag agcccgcccg cacagctgtt acccgccgtg aacaagcacg tgagcgagca
      121 gcacgccgga tcgatggacg agccgagcgt cggatcgcac tgttccacgc cctgttcgac
      181 gtagccgtcg ccgcagcgcg ggagcacgca ggcggtgaga cagccgtcgg tgttgtcttg
      241 gttgccgtcg tcgcacgctt cactgccgtc gaggtgaccg tcgccgcaga cggcgttgac
      301 gttcagtgtc acggcgtcga gcccgatttc gtcgcgggcg cccgtgccgc cggcgtcgtc
      361 gctcgtccag cgcaagaaca gataaccacc gggcggtacg ttcagcgcga gggtggtcgc
      421 ttgatcgtac gagcgccagg cgggcgtcgt cgggatcggt ccgtcgctcg tgaagtcgag
      481 cgcgggcacg ctcgtgaacg tgacgttgtc ggtggaccac gaaaaatcga agctcgacga
      541 gtgtgcctcg tcggcgaaaa cccagatttt gtagctcacg ccgacgctga ggagcgggcg
      601 cgtgagtgag ttcttgaagc gcgcgctgag cgagccgggc gtgaaatcgg cgtccgtcgg
      661 ttgaatgccg agcacgacgt ggccggcgcc cgtgtcgaag gcgtaaatcc cgccgttcgt
      721 gacgccgccc gtcgaggtgc cgcggccgaa gtcgctggac gtgccgttcg cgccgaagtc
      781 caaattgccg tccgagagcc ccgtcaccga ccacgcgagg gacgagagct gtcccgcgct
      841 cggcgccgcc acgatacccg cacccgtgaa gcccgcgaaa tcgacgctga cattcgaggc
      901 gctgacggcg agctgcgcgt gcgcgccggc tgcgacgccg agtagcatgc cgccgcacgc
      961 gactgccgcc acgaatcgaa tgctcatgtc cgggggctca cggcgcgatc gtcaacacgc
     1021 tcgcccgcgt ttggcaatgc gctcaacgtg agttcagcgt gagtgcgacg ggccttcctg
     1081 aaacgtgacg tcgagctcga gtcgcctacc gtcgcggatc accacgactt tcgtcgtctc
     1141 accgggcttg gatgcgttga gtacgtacat gaagtcttcg atgctgctga tgtcgtgcgc
     1201 gccgagccgc accatcaagt caccgtggcg catgccggcc ttttccgccg cgccgcctgg
     1261 acgcacgccg cccagcaaaa cgccgctctt tccgggtccc ggccccgcgt agtcggggat
     1321 cgtaccgagc gaggcgttga agctcctgag atcgccgcgc ggcggggccg ccttcaggcc
     1381 ggggttcacg tgcataggtg tttgttgcgc gccgagcgtc ttcacgagct cgctcacggc
     1441 gagcgcgatt tggccgaggc ccgcggcgtt gatcttgtcg ggcgtgtcgc tcggcttgtg
     1501 ataatcggcg tgcgcgcccg tgaagaagtg cagcacgggc acgccgccca cgaagaacga
     1561 catctgatcg ctcggtccgt agccgccgtc cgccgcgagc gcacactcga tgcgcgccgt
     1621 cgagcacgct ttgggcacga gctcttccca ctcggtcgcc gtctccccgc ccaacacttg
     1681 cacgcgattt tcgcgcaggc ggcccaccat gtcgaggttc aacatggcga acgcgccgtg
     1741 cttcgggagc gcggggtttt tccccgcttc gctcgtgcgc acgaagtgtg acgagccgag
     1801 caggcccgct tcctcgcccg aaaaggcgac cacgatcacg tcacgttcga gcttttcgcg
     1861 ctgggcggcg agtagccgcg cgatttcgag taagcccgcg acgcccgagg cgttgtcgtc
     1921 ggcgccgacg tgcggcgccg tgttgcccgg cgcgagcgag tagcgaccgc cgtaacccag
     1981 gtggtcgtag tgcgcgccga tgacgagcgc acccggcctg cgccgattcg ccggtacgcc
     2041 cgcgcggatg cggccgacca cgttgaaggc ctccgccgtc actgacttga gctcgaggtc
     2101 gagcttggcg tcgatgcgct ccttgcgcgc gagccgctcg agcagtgggt ggccgacatc
     2161 ccgcgcgagc acggcgacgg cgagcccggc atcgccataa ccctcgggag ttagtgacgg
     2221 cagcgccgct tcggcgggcg ctttccagtc ggcgggcgcg ctcgcggggc gctccgggtc
     2281 atcgacgacg atcagcgctt tggcgc
//
LOCUS       DATIML010000215         1700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1198982, whole genome shotgun sequence.
ACCESSION   DATIML010000215 DATIML010000000
VERSION     DATIML010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1198982"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1700)
                     /locus_tag="VLJ38_03770"
     CDS             complement(<1..>1700)
                     /locus_tag="VLJ38_03770"
                     /inference="COORDINATES: protein motif:HMM:NF037683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38654.1"
                     /translation="AVTAPLDAGASVSVHSCHGPAREVEVLSDQLLALLTRANDPVAP
                     EDVLVLVSDIEAYAPLIEATFRRDADDPRFIPFHVSDRGSRRDSALCDAFLRVLGLVR
                     GRVTGAEVLDLLLLEAVRHKLGIDAAGADTIKTWVVEAGVRWGMDAAQREASGLPGAN
                     GANTWRFGIQRLLLGYALPGDGQRAFEGLVGYDEVEGNDAVLLGALAGFVRTLFAWLR
                     DFERPRPLHEWSVAMSALLALLFDDGPDTLRKTAPIRRALDDMVRAATLAGFEDPLDV
                     AVVRDLIERRVDGLAPERGFLAGGVTFSAMVPMRSIPFRVIAVLGMNDGAFPRAPRPI
                     EFDLVRNGKNPRAPGDRAPREDDRYLFLETLCAARDKLIVTYSGKSVRDDRELAPSVC
                     LSELLEALTGPAGAEGARTRRAALVVEHRLQSFSPRYFDGKDPRLFSFAEEQAVGARG
                     LVRLETKEPSFIGELTPAEPPPEVALEDLVRYFKSPPAYLLNRRLGIFLNTDQTDVRA
                     REPLDLDALERWKIGAPLLEHCLTGVDADHSERLLRGTGELPLGAWGRKVLDDRRAEA
                     "
BASE COUNT          275 a          605 c          590 g          230 t
ORIGIN      
        1 tccgcttcgg cgcgccgatc gtcgagcacc ttgcgccccc acgcgccgag cggcagctcg
       61 cccgtgccgc gcaagagccg ctcggagtgg tccgcatcga cgccggtcaa gcagtgctcg
      121 agcaacggcg cgccgatttt ccagcgctcg agcgcgtcca agtcgagcgg ctcgcgcgcg
      181 cgcacgtcgg tttggtcggt attgaggaag atccccagtc ggcggttcag gaggtacgcg
      241 ggcggcgatt tgaagtagcg caccagatcc tcgagcgcca cttcgggcgg cggctccgcg
      301 ggcgtgagct cgccgatgaa cgaaggctct ttcgtttcga gcctcacgag cccgcgcgcc
      361 ccgaccgcct gctcctcggc aaagctaaag agccgcggat ctttgccgtc gaagtagcgc
      421 gggctgaagc tctgcaggcg atgctcgacg acgagcgcgg cgcggcgcgt gcgcgcgcct
      481 tcggcccctg ccgggcccgt gagcgcctcg agcagctcac tcaggcacac cgacggcgcg
      541 agctcgcgat cgtcgcgcac gctcttgccc gagtacgtca cgatgagctt gtcgcgcgcc
      601 gcgcagagcg tctccaagaa caaataacgg tcgtcttcgc gcggcgcgcg atcgcccggc
      661 gcgcgcggat ttttcccgtt gcgcacgagg tcgaactcga tcggccgcgg cgcgcgcggg
      721 aaggcgccgt cgttcatgcc gagcacggcg atcacgcgaa acggaatgct gcgcatcggc
      781 accatggccg aaaacgtcac gccgcccgcc aaaaagccgc gctccggcgc gagaccgtcc
      841 acgcgccgtt cgatgaggtc gcggaccacg gccacgtcga gcgggtcctc gaacccggcg
      901 agcgtcgcgg cgcgcaccat gtcgtccagc gcgcgccgaa tcggcgccgt cttgcgcaag
      961 gtgtcgggtc cgtcgtcgaa gagcagcgcg agcagcgccg acatggcgac cgaccactcg
     1021 tggagcggcc gcggccgctc gaaatcgcgg agccaggcaa agagcgtgcg cacgaacccc
     1081 gcgagcgcgc cgagtaagac ggcgtcgttg ccctcgactt cgtcgtaccc gacgagcccc
     1141 tcgaacgcgc gctgtccgtc acccggcagc gcgtaaccga gcagcaagcg ctggatcccg
     1201 aagcgccagg tgttcgcgcc gttcgctccg ggcaagccgc tcgcctcgcg ctgcgcggcg
     1261 tccatgcccc agcgcacgcc cgcctcgacg acccaggtct tgatcgtgtc ggcgcccgcc
     1321 gcgtcgatgc cgagcttgtg gcgcaccgct tcgagcagca acaaatcgag cacttcggcg
     1381 ccggtcacgc gcccgcgcac gaggccgagc acgcgcaaga acgcgtcgca cagcgccgaa
     1441 tcgcggcgac tgccgcggtc ggagacgtga aacgggatga agcgcggatc gtcggcgtcg
     1501 cgacgaaacg tcgcttcgat gagcggcgcg tacgcttcga tatccgagac gagcacgagc
     1561 acgtcttcgg gggcgacggg gtcgttcgcg cgcgtgagga gcgcgagcag ttgatcggag
     1621 agcacttcga cttcacgcgc ggggccgtga cacgagtgca cgctgacgga agcgcccgcg
     1681 tcgagcggcg ccgtgacggc
//
LOCUS       DATIML010000216         2724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1199241, whole genome shotgun sequence.
ACCESSION   DATIML010000216 DATIML010000000
VERSION     DATIML010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1199241"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..927
                     /locus_tag="VLJ38_03775"
     CDS             <1..927
                     /locus_tag="VLJ38_03775"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel"
                     /protein_id="HSU38655.1"
                     /translation="RARFVSFCGPVTLLAVLGLWIGLLTFGSALVLHPELGHAVRPSN
                     VVPRTDFLTALYVGGASISVVGSSGYSPETPIYRMFFLFNSAVGMAFISLVVTYLGQL
                     YNALLRRNALALKLHGLTDAKGDGAELVCRLWPRGELGSGTSALSELAAEMSAVKEAH
                     HFYPLLMQFRFEEPLYAVSRIVSVSLDAMSLVMSSLDEQRFGAVKESSGVTLLWRSSL
                     WLASSLTRNPPPSDARPAASDVALWKRRYGAALARLQSAGIATVADEEHGFERYADLR
                     SRWDGLVHALAPVLAFSIDEVDVPLAHAKHGA"
     gene            1001..1741
                     /locus_tag="VLJ38_03780"
     CDS             1001..1741
                     /locus_tag="VLJ38_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HSU38656.1"
                     /translation="MNLDKEKLSGKKIGILAGDGFEYAELAVPKAALKAAGADVEVIS
                     LHEGRIRGMNLTEPTRTVHVDRPINRAAVDDYDGLLIVGGFVGPDFVRQNERARSFVR
                     AFDEAFKPIATLCHGPWVLISAGCANGRRLASWPGVRDDIVNAGGIWRDEPLVRDRNW
                     VSSRSPADLPVFVPAIVELFARGADAPATGALASASTADESSPPPREPIRLALKAARH
                     LPSPTVAALAGAAIALTVGALAANRMLT"
     gene            complement(1782..>2724)
                     /locus_tag="VLJ38_03785"
     CDS             complement(1782..>2724)
                     /locus_tag="VLJ38_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38657.1"
                     /translation="WCTDAPRVPRRSTRFLAARYPPRVTTNYDAAVAELYRAPHDDFV
                     TERKRLAKELAAAGDKSAAAVLAKLSRPSVSAWATNQLYAHARELFDELFESAARLRE
                     GDLEAGAEHRRLTAKLVARAAEILKAAGHGASEGTLRRVSANLAALAAAGGFDPDPPG
                     ALKHDRDPPGFDVLAFGASLGETDAPTHAAPAKHAGGKAHAGGAASKHQSAASAHDHD
                     HAERERAARAKAEAARAKADAEAERRRAAEEQARARAERRKLESALRAVKADVERLTS
                     ERERLRSELEQTETELERASASERDLDDRLGKLPDSL"
BASE COUNT          359 a          893 c          976 g          496 t
ORIGIN      
        1 cgcgcgcgct tcgtctcgtt ctgcggaccc gtgaccctgc tcgcggtgct cggtctctgg
       61 atcgggctgc tcacattcgg gagcgcgctc gtgctgcatc ccgagctggg gcacgcagta
      121 cgtccgtcga acgtggtccc gaggaccgat ttcctgaccg ccctctacgt gggcggcgcg
      181 agcatctcgg tggtcggctc gagcggttat tcgccagaga cccccattta ccgcatgttc
      241 ttcctgttca actctgctgt cgggatggcg ttcatctcgc tcgtcgtgac ctacctaggg
      301 cagctctata acgcgctgct tcggcgcaac gcactcgctt tgaagctcca cggcctgacg
      361 gacgcgaaag gtgacggcgc agagctcgtg tgccgcctct ggccgcgcgg agagctcgga
      421 tcgggcacgt cggcgctctc cgagctcgcc gcggagatgt cggccgtcaa ggaggcgcat
      481 cacttctatc cattgctcat gcagttccgt ttcgaggagc cgctctacgc cgtctcgcgc
      541 atcgtgagcg tgtccctcga cgcgatgtcg ctcgtcatga gctcactcga tgaacagcgc
      601 ttcggcgccg tcaaagagtc ctccggcgtc acgctgctct ggcgctcgtc gttgtggctg
      661 gcgtcctcgc tgacgaggaa tccgccccct agcgacgcac ggcccgcggc gtccgatgtg
      721 gcactctgga agaggcggta tggtgctgcg ctcgcccgtc tccagtcggc gggcatcgcc
      781 accgtggcgg acgaggagca cggtttcgag cgttatgccg acctccgatc gcgctgggat
      841 ggcctcgtgc acgcgctggc gccggtgctc gccttctcga tcgatgaggt cgacgtgccg
      901 ctcgcgcacg ccaaacacgg cgcctgacag cccgaccacg cgctctccgc gccttgcgtg
      961 gcacgtcgct tgctcgccgc agagggagga ggcgtacgtc atgaacctgg ataaagaaaa
     1021 gctaagcggt aagaagatcg ggatcctcgc tggcgacgga ttcgaatacg cagagctggc
     1081 cgttccgaag gccgcgctca aagcagccgg agcagacgtg gaggtcatct cgctccatga
     1141 aggccgcatt cgcgggatga acctcaccga gcccacacgc acggtgcacg tggatcgccc
     1201 catcaatcgt gccgcggtgg acgactacga cggacttttg atcgtgggcg gattcgtcgg
     1261 tcctgatttc gtgcgacaga acgaacgcgc gcgcagcttc gtgcgcgcgt tcgatgaggc
     1321 gttcaagccg atcgcgaccc tctgccacgg gccgtgggtg ctcatctcgg ccggatgtgc
     1381 gaacggacgg cggctcgcct cgtggccggg cgttcgcgac gacatcgtca atgccggagg
     1441 tatctggcgg gacgagccgc tcgtgcgcga ccgcaactgg gtatcgagcc ggagcccggc
     1501 ggatctgcct gtgttcgtcc cggcgatcgt cgagctcttc gcgcggggcg cagacgcacc
     1561 cgcgaccgga gcgctggcga gcgcgtcgac cgcggacgag tcgtcgccgc cgccacgcga
     1621 gccgattcgg ctagccctga aggcggctcg gcacctgccg agtcccacgg tggcggcgct
     1681 tgcgggcgcg gcaatcgcgt tgaccgtcgg ggcgctcgcg gcaaatcgca tgctgacgtg
     1741 agctccgttc gcgatccgcg cacgcgcacg cgccgctcgg ttcacagact gtcgggtagc
     1801 ttgccgagtc ggtcgtcgag gtcgcgctcg gacgcgctgg cgcgctcgag ctcggtttcc
     1861 gtctgctcga gttcgctgcg tagacgttcg cgttcgctgg tgagccgttc aacgtcggct
     1921 ttgaccgcgc gcagggcgct ctcgagcttg cgccgctcgg cgcgagcgcg tgcttgctct
     1981 tcggctgcgc ggcggcgttc ggcttccgcg tcggccttgg cgcgtgcggc ttcggctttg
     2041 gcgcgagccg cacgttcgcg ttcggcgtga tcgtggtcat gggcggacgc cgcgctctga
     2101 tgcttggaag cggcgccgcc cgcgtgcgcc ttgccgccgg cgtgcttggc aggcgcggcg
     2161 tgcgtcggtg cgtctgtctc gcccaggctc gcgccgaatg cgagcacgtc gaagcccggc
     2221 gggtcgcggt cgtgtttgag cgcgccgggc ggatccggat cgaagccgcc tgcggccgcg
     2281 agcgcggcta ggttcgccga gacgcgccgg agcgtgcctt cgctcgcgcc gtggccggct
     2341 gctttgagga tctctgcggc gcgtgcgacg agcttggcgg tgagccggcg atgttcggcg
     2401 ccggcttcga ggtcgccttc gcgtaggcgc gcggcgcttt cgaagagttc gtcgaagagc
     2461 tcacgcgcgt gtgcgtagag ttggttggtc gcccaggcag agacgctcgg gcgcgagagc
     2521 ttggcgagga cggcggcagc cgatttgtcg ccggcggcgg cgagctcctt cgcgagacgc
     2581 ttgcgctcgg tgacgaagtc gtcgtgcggg gcgcgataga gttcggcgac ggcggcgtcg
     2641 tagttcgtcg tcacgcgcgg aggatagcgc gcggcgagga aacgggtgga acggcgcggg
     2701 acccgcggag catccgtgca ccag
//
LOCUS       DATIML010000217         2181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4085678, whole genome shotgun sequence.
ACCESSION   DATIML010000217 DATIML010000000
VERSION     DATIML010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4085678"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1511
                     /locus_tag="VLJ38_03790"
     CDS             <1..1511
                     /locus_tag="VLJ38_03790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38658.1"
                     /translation="SDAVTNRDAKVLARELLAYPEPPGEEEASFVERHNHKSAGAESC
                     PRLVARSDVSRTEDACPPLSLSFAGATERLFADVSFTPSGNVQEDRSPHLAQLAKLLA
                     LRTELELLGVRTATRAHAEAVIRQLESRGVEKGRLVVDRLLDASLPTRKPVPKCPSVG
                     EQVVFEVQKMGLSTLYRNIRQHPPAPVASPPFNRFETIQALLRFDPFGRRGPGALEDA
                     LSASRRWVAEERDNPLAYVSLGDALAAAGHQHLAAARAYGSLFDFELPGAGLVMAAAV
                     RLELNAGTTPDARRHDGTAAQQERVHDVGVQTFQRAWQDHPEQAEGARAYAYAKYREG
                     DENHAWCDLYEAAKYSAVAERVELPVFAHLYLKHARQEGILESLLAGDCSFPMQAPVH
                     GAVMSWEDTQSELEVSVTSEPKHFEYASVLSDQGGVSRAKWLPLPADDAAYPIHVTVR
                     ATKLGARGYAFGVLRVINYNGRGRMSFDEKPFVATDTAPVEVYSEHILQVPQ"
BASE COUNT          383 a          688 c          794 g          316 t
ORIGIN      
        1 cgagtgacgc cgtgacgaac cgagacgcga aggtcctggc acgcgagctc ctggcgtatc
       61 cggagcctcc aggcgaagaa gaggcgagct tcgtcgagcg gcacaatcac aagtccgcag
      121 gcgccgagtc gtgtccgagg ctggtcgctc gctcggacgt gtctcggacc gaggacgctt
      181 gcccgcctct cagcctgagc ttcgccggcg cgacggagcg cctgttcgcg gacgtgagct
      241 tcacgccctc aggcaacgtt caggaagacc gatcgccgca ccttgcacag ctcgcgaagc
      301 tgctcgcctt gcgcaccgag ctcgagctgc tcggtgtgcg gacggcgacg cgggcgcacg
      361 ccgaagccgt gatccggcag ctcgagagtc ggggcgtcga gaaggggagg ctcgtggtgg
      421 accggctgct cgacgcgtcg ctgcccacgc gcaaaccggt acccaagtgc ccgagcgtgg
      481 gcgaacaggt ggtgttcgag gtgcagaaga tggggctttc gacgctctat cgaaacattc
      541 ggcagcaccc gccggcaccc gtcgcgtcgc caccgttcaa ccgcttcgag acgattcagg
      601 cgctacttcg cttcgacccg ttcggaagac gtgggcccgg tgcactcgag gacgccctgt
      661 cggcgagccg tcgctgggtc gcagaggagc gagacaatcc actcgcctac gtttcgctcg
      721 gcgacgcgct ggcggccgca gggcaccagc atcttgcggc agcgcgtgcc tacgggtcgt
      781 tgttcgattt cgagcttccc ggcgccggcc tcgtgatggc ggccgcggtg cgactcgagc
      841 tcaacgccgg gacgactccc gacgcaaggc gccacgacgg caccgcggcg cagcaagaac
      901 gcgtccatga cgtcggcgtt cagaccttcc agcgagcatg gcaggaccac ccggagcaag
      961 cggagggcgc ccgcgcctac gcgtatgcga aatatcgcga gggcgacgag aaccacgcct
     1021 ggtgcgacct atacgaggcg gcgaagtaca gcgcggttgc cgagcgggtc gagctgccgg
     1081 tgttcgcgca cctgtacctg aagcacgctc ggcaagaagg catcctcgag agtctcctgg
     1141 cgggggattg cagcttcccg atgcaggcgc cggtgcacgg cgccgtcatg agctgggaag
     1201 acacgcagag cgagctcgag gtcagcgtga cctcggagcc gaagcatttc gagtacgcga
     1261 gcgtgctctc ggaccagggc ggcgtgtcac gtgcgaagtg gctgccgtta cccgccgacg
     1321 acgccgcgta cccgatccac gtgaccgtgc gtgcaacgaa gctcggcgcg cgtggctacg
     1381 cgttcggcgt gttgcgtgtc atcaactaca acgggcgcgg gcgtatgagc ttcgacgaga
     1441 agccgttcgt cgcgacggac acggcgccgg tcgaggtgta ttcggagcat atcctgcagg
     1501 tgcctcagta acgagtcacc ggcgcaagca actcgataag tctcgatgac ggcagcgctt
     1561 cgcggcgcag ctcgaccacc tcggcatcct cctcacgtcg cccgaggccg ctcacccgga
     1621 accgagcggg acgtcacagc ccggaggaat cgagcttcag tgtagaaacg tatgggccgg
     1681 tcagtgcagg taggtgtgac gcgcatctaa attagcgatc ggcttgaacg ttcggggcta
     1741 gcagcccaac caagctttgc gggcggagag acaacggatg cgacgactaa tcttgggcgg
     1801 gctcttcgtg gcgacgattg gcttcgtcgg atgcagttct gatgaaggct ctcagggcgg
     1861 aagcggcgca gccggaggca gccacggcgg cgcgtccgga agcgccgggg tgggtcaccc
     1921 aaccgctgga cgcgcgggca acggccagaa tggcggcggc acggctgccg ctgggcgcgg
     1981 aggctcgagc ggtgcgagcg ccgggacgaa cggtcaagca gcgagcagcg gcgaagccgg
     2041 acgcccaccg agcgagacgg gcggcagcgg cggctcgtca ggtagcggcg ggtcgctcgg
     2101 tagcggcggc tcgtcgggta gcggcggggg atcgccgagc acgggtggag aagcgggtgc
     2161 agcggacgtg ggaggcgcgg c
//
LOCUS       DATIML010000218         1562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4665879, whole genome shotgun sequence.
ACCESSION   DATIML010000218 DATIML010000000
VERSION     DATIML010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4665879"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /locus_tag="VLJ38_03795"
     CDS             <1..779
                     /locus_tag="VLJ38_03795"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38659.1"
                     /translation="FANPCTLQGVSGFHTGRMDDHVKQLLLLGREHYQKRELDKAEYL
                     LRQVVAETDRFADVFDMLGVISHSKGDFSQAERYFEKAVSLNPNYTEAQLNLMVTYND
                     LGKYDAAREIYGRIRSRGAAGGLGDPFAKGKIANMHAELSQAYQDVGMTPDAIAELEK
                     AVRLCPQFADLRTRLAVLYRDNGDPRRAREELELARAANPNYPQARLLLGVMMLSSGE
                     LDAAATEFETVLAKDPENKGAQMYLRVVKGRLANSERPAS"
     gene            880..1056
                     /locus_tag="VLJ38_03800"
     CDS             880..1056
                     /locus_tag="VLJ38_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38660.1"
                     /translation="MAVCKSCGEEADELVSVKVGGKTKKVCADCAERLEAEDAVGQES
                     EAAVQRMMDFKGRR"
     gene            1056..>1562
                     /locus_tag="VLJ38_03805"
     CDS             1056..>1562
                     /locus_tag="VLJ38_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38661.1"
                     /translation="MRGFSDGRLLAALTLVAWSCAKASDSDLAGRSYDPRTSGGKSGS
                     GARAGNGGGFSTGGTTTGGKAGTSAAGGTTTTGGSSSGFGGSSNATGGSNATGGGSNA
                     TGGGSNATGGTGASTGGSNATGGTATTSTGGSTSSGGTGGAVSTADAQVVLYYQAKST
                     AATADRVDM"
BASE COUNT          288 a          475 c          561 g          238 t
ORIGIN      
        1 tattcgccaa cccctgtact ttgcagggag tttcggggtt ccataccggg cgcatggacg
       61 atcacgtcaa gcagcttctc ctcttgggca gggagcatta ccaaaagcgc gagctcgaca
      121 aagccgagta cttgctgcgg caggtcgtgg ctgaaaccga tcgtttcgcg gatgttttcg
      181 acatgctcgg ggtgatctca cactccaagg gtgatttcag tcaggccgaa cgctacttcg
      241 agaaggcggt gagcctgaac ccgaactaca ccgaggcgca gctcaacctg atggtcacct
      301 acaacgacct cgggaagtac gacgccgcac gcgagattta cggacgcatc cgcagccgtg
      361 gtgcagccgg tggcctcggc gatccgtttg cgaagggcaa gatcgccaac atgcacgccg
      421 agctcagcca ggcctatcaa gacgtcggca tgacgccgga cgcgatcgcc gagctcgaga
      481 aggcggtgcg cctgtgcccg cagttcgctg atctgcgtac gcggctcgcg gtgctctatc
      541 gcgacaacgg cgatcctcgg cgtgcgcgcg aagagctcga gctcgctcgc gcggcgaatc
      601 ccaactaccc gcaggcgcgg ctgctgctcg gcgtcatgat gttgtcgtcg ggagagctcg
      661 acgcggcggc gacggaattc gagaccgtgc tcgcgaaaga tccagaaaac aaaggcgcgc
      721 agatgtactt gcgcgtggtg aagggccggc tcgccaattc ggagcggccg gcttcttagc
      781 ggcgggacgc gacgagtcgt cggttacagt tagagcggag tcgcgagtga cgcgctgacg
      841 ctgccagagc cgtacagggc cgtgctagag gttcggccga tggcggtgtg caaatcctgc
      901 ggtgaggaag cggacgagct cgtgagcgtg aaggttggcg gcaagaccaa gaaggtgtgc
      961 gccgattgtg ctgagcgcct cgaagccgaa gacgcggtcg gccaggagag tgaagccgcc
     1021 gtgcagcgca tgatggattt caaggggcgg cgctgatgcg cggcttctcc gacggccgct
     1081 tgctcgcggc tctgacgctc gtcgcttggt cgtgtgccaa ggcgagcgac tcggacctgg
     1141 cgggccgctc gtacgatccg cgtacctcgg ggggtaagtc aggcagcggc gcgcgcgctg
     1201 ggaacggtgg ggggttctcg acgggcggca cgacgacggg cggcaaagct ggaaccagtg
     1261 ccgcaggcgg cacgacgact acgggcggca gctcgagcgg cttcggcggc agctcgaacg
     1321 cgacgggcgg ctcgaacgcg acgggcggcg gctcgaacgc aaccggcggc ggctcgaacg
     1381 caaccggcgg cacaggcgcg tcgaccggcg gctcgaacgc aaccggcggc acggcgacga
     1441 cctcgacggg cggttcgaca tcgagcggcg gcaccggcgg cgcggtctcg accgcggacg
     1501 ctcaagtcgt cctctactat caggcgaaga gcaccgccgc gacggccgat cgcgtcgaca
     1561 tg
//
LOCUS       DATIML010000219         1979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1776846, whole genome shotgun sequence.
ACCESSION   DATIML010000219 DATIML010000000
VERSION     DATIML010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1776846"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VLJ38_03810"
     CDS             <1..185
                     /locus_tag="VLJ38_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38662.1"
                     /translation="HDAVTRSGIQIIERVAIPDDLIPADARVEMDAKTAAGYYTEGQV
                     PDGNELAKPKGRSLDG"
     gene            178..1404
                     /locus_tag="VLJ38_03815"
     CDS             178..1404
                     /locus_tag="VLJ38_03815"
                     /inference="COORDINATES: protein motif:HMM:NF019570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1688 family protein"
                     /protein_id="HSU38663.1"
                     /translation="MAERAPAAGSAAELEYLRTPRAIRERCSAIFALARDGRLEHFAL
                     DESKLEAVVERVLAVTRELYPDLRTIPYHGRFRHFGTGGVDRLARLDAAMAQLSREEQ
                     LMTRFELVITSVLIDAGAGADWVYRDANGKTFSRSEGLAVASFDWFFSGGLSLEAKAP
                     YRADAAKLERLSPAELARAFQVGPDNPLVGLEGRARLLRVLGRVVNEHPAYFGSPPRL
                     GALGLHLLAEAERGELDATRVLSAVLLGLGKIWPGRETLLGQNLGDVFPHPAVGRVPF
                     HKLSQWLTYSLCEPLEAAGLTLRGLSELTGLAEYRNGGLFIDAGVLVPKHARVLGDVH
                     AVGSEVVVEWRALTVALLDRTAERLRERVGLSPEELPLARVLEGGTWRAGRVLANEKR
                     PGGVPPLRVESDGTVF"
     gene            1420..>1979
                     /gene="upp"
                     /locus_tag="VLJ38_03820"
     CDS             1420..>1979
                     /gene="upp"
                     /locus_tag="VLJ38_03820"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF001097.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HSU38664.1"
                     /translation="MTFPNVTVIDHPLVQHKLTLLRQKERSTNSFRALMAEISMLLAY
                     EVTRDLTLIYEEIETPLAKMRAPLLEGKKVVLINILRAGSGMVEGMLRILPSARVGHI
                     GLYRDPETLGAIEYYFKLPGEMTGRDVILVDPMLATGNSAIAAVERVKTAAPRSLKFV
                     CIVAAPEGLLNFRESHPDVPVFAAAI"
BASE COUNT          320 a          683 c          641 g          335 t
ORIGIN      
        1 aacacgatgc cgtcacgcgc tccggcatcc agatcatcga acgcgtggcg atccccgacg
       61 acctcattcc cgcggacgcg cgcgtcgaaa tggacgccaa aacggcggct ggctactaca
      121 ccgaaggtca ggtccccgac ggcaacgagc tcgcgaaacc caaaggccgc tcgctcgatg
      181 gctgagcggg ccccagcagc gggttcggcg gcggagctcg agtacctccg gacgccacgc
      241 gcgatccggg agcgctgcag tgcgatcttt gctctggctc gggacggaag gctcgagcac
      301 ttcgcgctcg acgagtcaaa gctcgaggcg gtggtcgagc gggtgctggc ggtgacacgg
      361 gagctctacc cggatctccg caccatcccg tatcacgggc gatttcgtca cttcgggacg
      421 ggcggcgtcg atcggctcgc ccggctcgat gctgcaatgg cgcagctctc gcgcgaagag
      481 cagctcatga cgcgtttcga gctcgtgatc acgagcgtgc tcatcgacgc gggagccggc
      541 gcagattggg tgtaccgtga cgcgaacggc aaaacgttca gtcggtccga aggactcgcc
      601 gtggcaagct tcgattggtt cttctcgggc gggttgtcgc tcgaggccaa ggctccgtat
      661 cgcgcggacg cggcgaagct cgaacgcctc tcgccggccg agctcgcacg cgcctttcag
      721 gtcggccccg acaatccgct cgtcgggctg gagggccgag cccggctttt gcgagtgctt
      781 ggccgagtcg tgaacgagca tcccgcttac ttcggctctc ccccgcggct cggcgcgctc
      841 ggcctgcatt tgctcgctga ggccgaacgc ggcgagctcg acgccacgcg cgtcttgtcc
      901 gccgtgctgc tcgggctcgg caagatctgg cccggccgcg agaccctgct cggccagaac
      961 ctcggcgacg tcttccctca ccccgctgtc ggtcgcgttc cgtttcacaa gctctcgcag
     1021 tggctcactt actcgctctg cgagccgctc gaagccgcgg gactcacgct gcgtggcctc
     1081 tccgagctca cgggcctcgc cgagtacagg aacggcggct tgttcatcga cgccggggtg
     1141 ctcgtcccga agcacgcgcg tgtgctcggc gacgtgcacg cggtcggttc cgaagtcgtc
     1201 gtcgagtggc gtgccctcac cgtcgcgctg ctcgatcgca ccgccgaacg gctgcgtgag
     1261 cgcgtgggcc tctcgcctga agagctcccg ctcgcgcgtg tgctcgaagg cggcacctgg
     1321 cgcgccgggc gcgttctggc caacgaaaag cgccccggcg gcgttccccc actgcgcgtc
     1381 gagagcgacg gaaccgtatt ctgagcgggt cttagaagca tgactttccc caacgtgacg
     1441 gtgatcgacc accccctcgt gcagcacaag ctcaccctcc tccgccagaa agagcgcagc
     1501 accaactcct tccgcgcgct catggccgag atcagcatgc tgctcgccta cgaggtcacg
     1561 cgcgatctca cgctgattta cgaagaaatc gaaacgccgc tcgccaagat gcgggcgcca
     1621 ctgctcgagg gcaagaaggt ggtgctcatc aacatcttac gagcgggaag cggcatggtc
     1681 gaaggcatgc tgcggatcct gccgtcggcc cgtgtcggtc acatcgggct ctaccgcgat
     1741 cccgaaacgc tcggcgccat cgaatactac ttcaagcttc cgggcgagat gaccggccgc
     1801 gacgtcatcc tggtggatcc aatgctcgcg accggcaaca gtgccatcgc cgcggtcgag
     1861 cgagtcaaga cggccgcacc gcgctcactc aagttcgtgt gcatcgtggc cgcgcccgag
     1921 gggctactga acttccgtga gtcgcacccg gacgtgccgg tgtttgcggc ggcgatcga
//
LOCUS       DATIML010000220         4682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_910356, whole genome shotgun sequence.
ACCESSION   DATIML010000220 DATIML010000000
VERSION     DATIML010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4682
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910356"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..639
                     /locus_tag="VLJ38_03825"
     CDS             61..639
                     /locus_tag="VLJ38_03825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38665.1"
                     /translation="MARPSRPPGFDMTYRPAETAFGPPLSAHLPSAFYLLCAVAAAVT
                     VFVAYQAPVGSFLYQNIVERSARGVIGARTVSLLLVAGAISSLIKSSMRGVRIRPDGL
                     EFREVVSLGIPRVRRYKWAQIDRILLDSPSTIMIELWDGTHAYLPDVSDREQLGAALE
                     KIALARAIPVRGGSGVDELPDETEREDREDAG"
     gene            720..1826
                     /locus_tag="VLJ38_03830"
     CDS             720..1826
                     /locus_tag="VLJ38_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSU38666.1"
                     /translation="MNQSALDHVFAVILAGGSGTRFWPASRRALPKQLLPLGPSAELP
                     LIGATVKRIEPLVPHERILIATGAELLPATRRALPFLPESSFLGEPFARNTAPCIGWA
                     AAVARRRDPNAIVMVLPSDHHITDEPRFREVLGLALDAAARGAIATVGIEPTRPDTGY
                     GYIELGAELRPGVRQGVRFVEKPDRARAEEYVASGRYVWNGGMFFFRAERLLTEVGRH
                     LPELAAGLSRIEEAARGGADHERAETARVFEALKGVSIDVGIMEKVGAFEVVPASVGW
                     SDLGSWESAWELADKDGDGNATNADGLVLEGERNLLLDLRSPGKKRVMVALGVDDLCV
                     VETDDALLVMKRERAQHVRSIVEALAQAGHHDKL"
     gene            complement(1855..2616)
                     /locus_tag="VLJ38_03835"
     CDS             complement(1855..2616)
                     /locus_tag="VLJ38_03835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38667.1"
                     /translation="MANWQDDPDLAAFKPRRGSTPWGRIFVGVLFVGCGTFALAYYLP
                     LYRAHHALSDDHARLREKLEGVEQALQKSEAELKTVTAKRDELQASVDQAQAKVSAGT
                     SDLGSVKDALANAADKAIKKKAAAVGADASGARLAVAPSQLFAAGKLELSGAGGALLC
                     AIAKAAGSRTLHVTGVATDADVPAPLKSKFENGWAYAAAASAAVVAALHDKCSVADTK
                     LYAEASDGAHAAPVAFGGSAPAPRIEILVANETKP"
     gene            2800..4062
                     /locus_tag="VLJ38_03840"
     CDS             2800..4062
                     /locus_tag="VLJ38_03840"
                     /inference="COORDINATES: protein motif:HMM:NF025597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYF domain-containing protein"
                     /protein_id="HSU38668.1"
                     /translation="MDEDLWHVRIAPDEVKQLTLEQLDDLFRLEVIEADALVWQPGMT
                     EWLPLSVVAGLDEEGSPTDKVSIPVSAPPPAPRQMAATATAWPPRVAAPASARPAPPS
                     ARLPPPSLPPPPSARAVATASSWPPAAAWSNPPPKPAAPPPARSNAPRAPANPYAAPV
                     NPYAATAELPARSNPPPSARHVSPFASPSMPAPLPSAPLSTAPFARTQRLHRPSGGGG
                     GGWVVFLAFAAGAAVTLYRNDLVHAAARSVGHETSYFELERALGGPSFGTPRAVQQMA
                     AATAALSATSEAASSAPANPTSTATLGAATSSGVSTSTTSATTAAPTTGTTTTASDSD
                     HGSNATTHADTTSSEHAAAHTEFAAAKSSPMKAAPAHSPSSTHSAATHASSSRSSASE
                     DVDPVFQTPKKGKKAGKASEYDPLNPSL"
     gene            complement(4073..>4682)
                     /locus_tag="VLJ38_03845"
     CDS             complement(4073..>4682)
                     /locus_tag="VLJ38_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HSU38669.1"
                     /translation="IDKARRLIDYRKVELDPARRAVRIGKEQKLGLGGVAKGFIVDRA
                     ARVLREVGLSAFLVQAGGDLYGAGRKPDGSAWVSGIQDPRGPQGEYFATIELEDHAFS
                     TAGDYARSYVLGGKRYHHIIDPRSGYPATACRSVTVWAPDAFLADAIDDAVFILGPEQ
                     GLALVESLDGVGVVIVDRNNKVTVSPRLAGKVRLLAQPTNGL"
BASE COUNT          712 a         1691 c         1554 g          725 t
ORIGIN      
        1 ggtcctacca tccttcgctt actacccaaa gggatggggc acggttacgg tccatgacgc
       61 atggctcgcc cgtcccgccc gccgggcttc gacatgacct atcgaccggc ggagaccgcg
      121 ttcggtccac cgctcagcgc gcacctgccg tccgcgttct acctgctctg cgcggtcgcc
      181 gccgcggtca cggtgttcgt cgcgtatcaa gcgcccgtgg ggagcttcct ctaccagaac
      241 atcgtcgagc ggagtgcgcg cggcgtgatc ggcgcgcgca ccgtctccct cctgctcgtg
      301 gcgggcgcaa tctcgtcctt gatcaagtcg agcatgcgcg gcgtacgcat tcgccccgac
      361 ggtctcgagt ttcgcgaagt cgtctccctc ggcatcccgc gcgtgcgtcg ctacaagtgg
      421 gcccagatcg atcgcatcct gctcgactcg ccgagcacga tcatgatcga gctctgggac
      481 ggcacgcacg cctatttgcc cgacgtgagc gaccgcgagc agctcggcgc cgcgctcgaa
      541 aagatcgcgc tcgcccgtgc cattcccgtg cgcggcggca gcggcgtcga cgagctcccc
      601 gacgaaaccg agcgcgaaga ccgcgaagac gcgggttagc ggccgccccg tgggagctcg
      661 agcgctcgct gcgtaaggcc ctggacgccc cggcgacctc tgacggagaa tgagcgcgca
      721 tgaaccagag cgcgctcgat cacgtctttg ccgtcatcct cgcaggcgga agcgggaccc
      781 ggttttggcc ggcctcccgg cgcgcgctgc cgaagcagct cttgccgctc ggacccagcg
      841 ccgagcttcc gctgatcggc gcgacggtga agcgcatcga accgctcgtc ccgcacgagc
      901 gcatcttgat cgcgacgggc gccgagctct tgcccgcgac gcggcgcgcg ctgccgttct
      961 tgcccgagag ctcgtttttg ggtgagccgt tcgcgcggaa cacggcgccc tgcatcggct
     1021 gggcggctgc cgtcgcgcga cgccgcgatc cgaacgcgat cgtcatggtg ctaccgagcg
     1081 accaccacat caccgacgag ccgcgctttc gcgaagtgct cgggctcgcg ctcgacgcgg
     1141 ccgcgcgcgg cgccatcgcg acggtcggca tcgagcccac acggcccgac accggctacg
     1201 gctacatcga gctcggcgcc gagctccggc cgggtgtcag gcagggggtg cgcttcgtcg
     1261 agaagccgga ccgcgcgcgc gccgaggagt acgttgcgag cggccgttac gtctggaacg
     1321 gcggcatgtt cttcttccgc gccgagcggc tgctcaccga ggttggccgt cacttacccg
     1381 agctcgcggc gggactctcg cgcatcgagg aggcggcgcg cggcggcgcc gatcacgagc
     1441 gagcggagac ggcgcgcgtg ttcgaggcgc tcaagggcgt gagcatcgac gtcgggatca
     1501 tggaaaaggt cggcgcgttc gaagtcgtgc ccgcgagcgt cggctggagc gatctcggca
     1561 gctgggaaag cgcgtgggag ctcgccgaca aggacggcga cggcaacgcg acgaacgccg
     1621 acggcctcgt gctcgaggga gaacgcaatc tcctgctcga cctacgcagc cccggcaaaa
     1681 agcgcgtgat ggtcgcgctc ggcgtcgacg atctctgcgt ggtcgaaacg gacgacgcct
     1741 tgctcgtcat gaaacgcgag cgcgcgcagc acgtgcgctc catcgtcgaa gcgctcgcgc
     1801 aagccggaca tcacgataag ttgtgaaggc gccgtacggc gccctggcga cggtctacgg
     1861 cttcgtttcg ttcgcgacca ggatctcgat gcgcggtgcc ggcgcgctac ctccgaacgc
     1921 gacgggtgcg gcgtgcgcac cgtcggaggc ctcggcgtaa agtttcgtgt cggctaccga
     1981 gcacttgtcg tgcaacgccg cgacgacggc ggccgaggct gcggccgcgt aggcccagcc
     2041 gttctcgaat ttggacttga gcggcgccgg cacgtcggcg tcggtcgcga cgccggtcac
     2101 gtgcagcgtg cgcgaccccg cggccttcgc gatcgcgcag aggagcgcgc cgccagcccc
     2161 gctcagctcg agtttgcccg cggcaaagag ctgcgagggc gctacggcga gccgtgctcc
     2221 gctcgcgtcc gctccgacgg ctgctgcctt cttcttgatg gccttgtccg cggcgttcgc
     2281 gagcgcgtcc ttgacgctcc cgagatcgct cgtacccgcg ctgaccttgg cttgcgcctg
     2341 gtcgacgctc gcttggagct cgtcgcgctt ggccgtcacg gttttgagct cggcctcgct
     2401 cttttggagc gcctgctcga cgccctcgag cttttcgcgc aggcgggcgt gatcgtcgct
     2461 gagggcgtgg tgcgcccgat agagcggcag gtagtaggcg agggcgaagg taccgcagcc
     2521 cacgaacagc acgcccacga aaatacgtcc ccacggcgtg ctgccgcgac gcggcttgaa
     2581 cgcggcgagg tcgggatcgt cttgccaatt cgccatgagc gcagaagtcc gacggctgga
     2641 gcctgccgct cgtcaatcaa tgcacaggtt caacgcatta ggggagaaat ccgtctcatc
     2701 gataaaaatc cgctcacctc gaatcgaaat gaacactcgg cggcggatga cgacagttcg
     2761 taggcggcgg cccgccgacc aactgttatt gttcccttca tggatgagga tctgtggcac
     2821 gtccgcatcg cgcccgatga agtgaagcag ctcactctcg agcagctcga cgatctcttt
     2881 cgcctcgagg tgatcgaggc ggacgcgctc gtctggcaac ctggtatgac ggagtggctg
     2941 cccctcagcg tcgtcgcggg actcgacgaa gaaggctcgc caaccgacaa ggtcagcatc
     3001 ccggtttcgg cgccgccgcc cgccccgcga cagatggccg ccaccgcgac cgcgtggccg
     3061 cctcgtgtcg cggcgcccgc ttcggcgcgg cctgccccgc cctcagcgcg cctgccgccc
     3121 ccgagtctgc cgccgcctcc ttcagctcga gctgtcgcca ccgcatcttc gtggccaccc
     3181 gcggcggcat ggtcgaatcc tccgccgaaa ccggccgcgc ctccgcccgc ccgctcgaac
     3241 gccccgcgtg cgccggccaa tccctacgcc gccccggtga acccctacgc cgccacggcc
     3301 gagttgcccg ctcgatcgaa cccgccgccg agcgcgcggc acgtttcgcc gttcgcttca
     3361 ccgtccatgc ccgcgccgct cccgagcgcg ccgctttcga cggcaccgtt cgcgcgcacg
     3421 caacggctgc atcgcccgag tggcggcggg ggcggcggtt gggtcgtgtt cctcgccttc
     3481 gcggcgggcg cagccgtcac gctctaccgc aatgatttgg tgcacgcggc cgcgcgctcg
     3541 gtcggccacg aaacgagcta cttcgagctc gagcgcgcac tcggcggccc gagcttcggc
     3601 acgccgcgcg cagtccagca gatggccgcg gcgaccgcag cgctcagcgc gacgagcgaa
     3661 gccgcgagca gtgcgccggc gaatcccacc tcgacggcga cgctcggcgc agctacgtcg
     3721 agcggtgttt cgacgtcgac gacttcggcg acgacagcgg ccccgacgac cgggaccacc
     3781 acgaccgcga gcgacagcga tcatggcagc aatgcgacga cgcacgccga cacgacgagc
     3841 agcgagcacg ctgccgcgca caccgagttc gccgccgcga aatcctctcc gatgaaagcg
     3901 gcgcccgcgc actcgccctc cagcacccac agcgccgcca cgcacgcgtc gtcgtcgcgc
     3961 tcttccgcct cggaggacgt ggaccccgtc tttcagaccc cgaagaaggg caagaaggcc
     4021 ggcaaagcga gcgagtacga cccgctgaac ccctcgctct gagtcacgcg gctcagagcc
     4081 cgttcgtcgg ttgcgccaag agccgcacct tgcctgcgag ccgcgggctc accgtgactt
     4141 tgttgttgcg atcgacgatc acgaccccga cgccgtcgag cgactcgacc agcgcgagtc
     4201 cctgctccgg tccgaggatg aagacggcat cgtcgatggc gtcggcgagg aacgcgtcgg
     4261 gcgcccacac cgtgacgctg cgacaggcgg tcgccggata gccgctgcgc ggatcgatga
     4321 tgtggtggta gcgcttgccg ccgagcacgt aggagcgcgc gtagtcaccc gccgtggaga
     4381 aggcatgatc ctcgagctcg atggtcgcga aatactcgcc ttgcggtccg cgcggatcct
     4441 gaatgccgct cacccacgcg ctgccgtcgg gcttgcgccc ggcgccgtac aagtcaccgc
     4501 ccgcttgcac caaaaacgcg ctgagcccga cttcccgtag cacgcgtgcg gcgcggtcga
     4561 cgatgaagcc cttggcgaca cccccgagcc cgagcttttg ctccttgccg atgcgcacgg
     4621 cgcggcgcgc cgggtcgagc tcgaccttcc ggtagtcgat cagccgtcgt gccttgtcga
     4681 ta
//
LOCUS       DATIML010000221         2698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_910397, whole genome shotgun sequence.
ACCESSION   DATIML010000221 DATIML010000000
VERSION     DATIML010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910397"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1513)
                     /locus_tag="VLJ38_03850"
     CDS             complement(<1..1513)
                     /locus_tag="VLJ38_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU38670.1"
                     /translation="MVPGFGKQTIIVGSAPHADIRLGGPGVAPEHARIVHQGSGTLVL
                     VDLGVGPTFADGAPIAAGSTVPFDLRKQFVVGQASIPNAHPALTLMLLEVGKAPPVQG
                     QLVFGREPAQSHVTVHHPNVSARHATFQLQPLAVVDHSSTSGTYVDRQRAAAGQPHPL
                     TQHSFVALGPVTVPVALVLQLAQALGVGGASAGPAQATGAAEQFAPVPAAAALHAAAA
                     PGAHSGPLAASAVPPEAGGGRPKHKTVIGQLQLGGGAAGGGQKTIGRTPDNDIQIPNP
                     QVSSRHAILHSAGGQLFLEDRGSANGTYVRGQRIPPGNRVPVQNGEKVFIGPMPLVLQ
                     VAGQEVAVVVEDTAHWEGRPLYEIEAWDLVSQVPDRDNPSELKTLLDHVSFKALPGDF
                     IALMGPSGAGKTTLLLTLNGYLPPTAGQVRINGEDLYAIYDALRGSIGYVPQDDIVHP
                     ELTVFEAVRYSAKFRLPPDYSDDEINRRVDTTLAQLGLEQVAHLQIGKPERKIL"
     gene            complement(1586..2011)
                     /locus_tag="VLJ38_03855"
     CDS             complement(1586..2011)
                     /locus_tag="VLJ38_03855"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HepT-like ribonuclease domain-containing
                     protein"
                     /protein_id="HSU38671.1"
                     /translation="MSLDLEVLAERVSAVERHLARVHEKLPLEREALSAATDASDAVV
                     LHLWQAVQIVIDLAVSWCVKSNLGAPASYGDAFDRLANAGALNRDLAERLKKAAGFRN
                     VVAHAYDALDLGRVHDAALHGPADLRAFLARARDGARSA"
     gene            complement(2008..2397)
                     /locus_tag="VLJ38_03860"
     CDS             complement(2008..2397)
                     /locus_tag="VLJ38_03860"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HSU38672.1"
                     /translation="MFELAPADVDEIRRQFPELRLLVLHGSRARGDAHSGSDWDFAYQ
                     AESSLDELALRAVLADRLRTDKLDVLDLDRAGGLVRYRAARDGKAVFERGTGEFERFR
                     LEAVRFWLDAAPVIRAGYADVLESVDR"
     gene            complement(2450..>2698)
                     /locus_tag="VLJ38_03865"
     CDS             complement(2450..>2698)
                     /locus_tag="VLJ38_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU38673.1"
                     /translation="LAGQELRAGRDAAQCGIVLNEPRISGVHATLKLDGGQLWVRDEN
                     SNNGTLVNGNRIAPGVWSPVPQGSILRLGPVEFSARIG"
BASE COUNT          409 a          913 c          957 g          419 t
ORIGIN      
        1 agaggatctt gcgctcgggc ttgccgattt gcaggtgcgc gacctgctcc aagccgagct
       61 gagcgagggt cgtatctacc cggcggttga tctcgtcgtc cgagtaatcc ggcgggaggc
      121 ggaacttcgc gctgtagcgc acggcctcga acaccgtgag ctcggggtgg acgatgtcgt
      181 cctgcggtac gtagccgatc gagccgcgca gggcgtcgta gatggcgtag agatcctcgc
      241 cgttgatgcg cacttggccg gcagtcggtg gcaaatagcc gttcagcgtg aggagcagcg
      301 tcgtcttgcc ggcgccgctc ggacccatga gcgcgatgaa atcgccgggt agcgccttga
      361 agctcacgtg atcgagcagc gtcttgagct cgctcgggtt gtcgcgatcg ggcacttgcg
      421 agacgagatc ccacgcctcg atctcgtaga gcggacgtcc ttcccagtgc gccgtgtcct
      481 cgacgacgac ggcgacctct tgcccagcga cctggagcac gaggggcatc gggccgatga
      541 acaccttctc gccgttctgg accggcacgc ggttgccggg cgggatgcgc tggccacgca
      601 cgtaggtgcc gttggcgctg ccgcgatcct cgaggaagag ctggccgccg gcgctgtgca
      661 ggatggcgtg acggctcgag acctgcggat tggggatttg gatgtcgttg tcgggggtgc
      721 ggccgatggt tttttggccg ccgcctgccg cgccgccccc gagctgcagc tgcccgatga
      781 ccgtcttgtg cttgggccgc ccgccgccgg cttcgggtgg gacggccgag gcggcaagtg
      841 gacccgagtg cgcgccgggc gccgcggcgg cgtgcagggc tgccgctgcg ggcacgggcg
      901 cgaattgctc ggcggcgccc gttgcctgcg cgggtccggc actcgcgccg ccgactccga
      961 gcgcctgcgc gagctgcaag acgagcgcga cggggacggt cacgggaccg agcgcgacga
     1021 acgagtgctg cgtcagcggg tgcggctggc ccgccgctgc gcgttgccga tcgacgtacg
     1081 tgcccgaggt cgacgagtga tccacgacgg cgagcggctg cagctgaaac gtcgcgtgcc
     1141 gcgccgagac gttcggatgg tgcaccgtga cgtggctctg cgcgggctcg cgcccgaaca
     1201 cgagttgtcc ctgcacgggc ggcgccttgc cgacctcgag cagcatcagc gtgagcgcgg
     1261 gatgcgcatt cgggatcgac gcttggccca ccacgaactg cttgcgcaaa tcgaagggca
     1321 cggtgctgcc cgccgcgatc ggcgctccgt ccgcgaacgt cggccccacg ccgagatcga
     1381 ccagcacgag cgtgcccgac ccctgatgga cgatgcgggc gtgctcgggc gccacacccg
     1441 gaccccccaa acgaatgtcg gcgtgcggcg cgctaccgac gatgatggtt tgcttgccga
     1501 atccgggcac catgggtccg gcagcttagg agacgcggcg gctgctggga acgggccgat
     1561 tctcgccgct ttgcggggcc atttctcacg cgctgcgcgc gccgtcacgc gctcgcgcga
     1621 ggaacgcgcg taggtccgcc ggaccatgga gcgcggcgtc gtggacccga ccgaggtcga
     1681 gcgcgtcgta cgcgtgcgcg acgacgttgc ggaaaccggc ggcctttttc aagcgctcag
     1741 ccaggtctcg gttgagcgcg cctgcgttcg ccaagcgatc gaacgcgtcg ccgtagctgg
     1801 cgggtgcccc caaattcgac ttgacgcacc acgaaacggc aaggtcgatc acgatctgta
     1861 ccgcctgcca cagatgaagc acgaccgcgt ccgaggcgtc ggtggcggcg ctgagcgcct
     1921 cgcgctcgag cggaagcttt tcatgcacgc gcgccaggtg ccgttccacg gccgagacac
     1981 gctcggcgag cacctcgagg tcgagactca ccggtcgacg ctctccaaca cgtccgcgta
     2041 gccggcacga atgacgggag ccgcgtcgag ccagaagcga acggcctcca gcctgaagcg
     2101 ctcgaactca ccggttccgc gttcgaacac cgctttgccg tcccgagcag cgcgatagcg
     2161 cacgagccct cccgcgcggt cgaggtccaa aacatcgagc ttgtccgtcc gcaaccggtc
     2221 cgcaagcacg gcgcgcaggg caagctcgtc gagcgagctt tcagcctggt aggcgaaatc
     2281 ccagtccgaa cccgagtgcg cgtcgcctcg tgctcgcgag ccatgcagga cgagcagccg
     2341 aagctccgga aactgccgcc ggatctcgtc gacatcggcg ggcgcgagct cgaacatgcc
     2401 cggttaggct accgcgccgt ctcctcgacg gcgagcttcc gtcgcgcgct cagccgatgc
     2461 gcgcgctgaa ctcgacaggc ccgagccgca aaatcgagcc ctgcggcacc gggctccaga
     2521 cgccgggcgc gatgcggttg ccgttgacga gcgtgccgtt gttgctgttt tcgtcgcgga
     2581 cccagagctg gccgccatcg agcttcagcg tggcgtggac gccggagatg cgcggctcgt
     2641 tcaagacgat gccgcactga gccgcgtcgc gcccggcgcg cagctcctgc ccggcgag
//
LOCUS       DATIML010000222         4101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5531646, whole genome shotgun sequence.
ACCESSION   DATIML010000222 DATIML010000000
VERSION     DATIML010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4101
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5531646"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(249..836)
                     /locus_tag="VLJ38_03870"
     CDS             complement(249..836)
                     /locus_tag="VLJ38_03870"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HSU38674.1"
                     /translation="MDFEVPPLPYAKDALEPVMSRETFDYHYEKHHKTYMTNLKGLIE
                     GKPEASKSLVEIVKTSSAGVFNNAAQVWNHTFFWESMKPKGGGAPPAGEVGDLIGGMG
                     GWDKVRADLIAAGLGRFGSGWAWLVLDGGKGSILSTPNAETPLTTSAVPLLTVDVWEH
                     AYYIDQRNNRKAFLEAFCDKLINWDFVAKNLKSAK"
     gene            1074..2006
                     /locus_tag="VLJ38_03875"
     CDS             1074..2006
                     /locus_tag="VLJ38_03875"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU38675.1"
                     /translation="MSKIVLLATEKPFSAAARDEVVAIIKSAGYTARVLESYKGKGPL
                     LEAIADADAAIVRSDIIDAEVLGAAKKLALVVRAGAGYDNIDTAAAKGKSVAVMNTPG
                     QNANAVAELAFGMMVYLARGKFDGKTGSELRGKTLGLHAFGAVGRAVATIANGFGMTV
                     FAYDPFVKPEAFKAAGVEAVGSAEELYKRSQYVSLHVPATAETKNSIGKKLLSLMPKG
                     GTLVNTARKEIINEAELLEAFGERADLRYISDIPPSDATLATLKEKFGARVYVTPSKM
                     GAQTEEANVNAGLAAARQIVGFFERGERQFIVNP"
     gene            complement(2481..3329)
                     /locus_tag="VLJ38_03880"
     CDS             complement(2481..3329)
                     /locus_tag="VLJ38_03880"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU38676.1"
                     /translation="MANERDTRSLPAGRSKRFWLEHEGQNVELRRGTLVVGRSSSCHL
                     VLEDSMVSRRHAELIVAEESVTVRDLGSVNGLYVNAHRVEGSQRMKEGDTLQIGQREF
                     VLRSLAREVGPTGHERQMAETLHGDALASENPPSEDQTHVGDVFDVLGSVADKVLAMD
                     RGEEAERILSGVLQSILREAKEGRDVPQPVAERAASYAVRIAGATSRANWLDYVVELY
                     TVLRRILPGALVDQLYDVVRKARGMHVTALRAYVAVLEEQQSAFGPAERFVLQRIAGL
                     ERVVLS"
     gene            complement(3384..>4101)
                     /locus_tag="VLJ38_03885"
     CDS             complement(3384..>4101)
                     /locus_tag="VLJ38_03885"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU38677.1"
                     /translation="SREFDLPNGRFIIGRADDAALALDDPLVSRHHAAIDVAGSIATL
                     VDLDSRNGVRVNGKKITREHVLAPGDRIAVGSSELSVALPRDPAAQAPVHAPTLRMST
                     FGLLGALADKAFALGRGDEAERLLGPQLEHLLADVERGKKHDPALVDRACGYALKIAN
                     MAGSAAWVDRVYRFYRAAGRLCPSAIVDELYVVVRKVKQPNVAELRAYLAAIREREGE
                     LSPADRFLVSRLEGLERSLA"
BASE COUNT          657 a         1368 c         1400 g          676 t
ORIGIN      
        1 atcagctttc tccgagggag ccctttgctc cggtgtgttg cgctccgggg acttggaacg
       61 gccacaggcg ctcgcgctgg cgagcgtcag cgcggcggct agcactcgtg ccaaatgggg
      121 aacgtgcgtc ggttcaggca ccggctagtt gcacgtggct acgtttcccg gcaaggagag
      181 tgccggcgcc gagccaatgc cggcgccgtg cagacaacgt tcgtgttcgc ggcgtccgcc
      241 gcgacgagtt acttcgcgct cttcaggttc ttggcgacga agtcccagtt gatgagcttg
      301 tcgcagaagg cttcgaggaa ggccttccgg ttgttgcgct ggtcgatgta gtaggcgtgc
      361 tcccaaacgt cgacggtcag cagggggacc gcggaggtgg tgagcggggt ttcggcgttg
      421 ggggtgctga ggatcgagcc cttgccgccg tcgaggacga gccatgccca gccggagccg
      481 aaacggccga ggcccgcggc gatgaggtct gcgcgtacct tgtcccagcc gcccatgccg
      541 ccgatgagat cgccgacctc acctgccggc ggcgcgccgc cgcctttggg cttcatgctc
      601 tcccagaaga acgtgtggtt ccagacttgc gcagcgttgt tgaagacgcc ggcggagctc
      661 gtcttgacga tttcgacgag cgatttcgac gcctcgggct tgccttcgat caagcctttg
      721 aggttcgtca tgtaagtctt gtggtgcttc tcgtagtgat agtcgaacgt ctcgcgactc
      781 atcaccggct cgagcgcatc cttcgcgtac ggtagcgggg ggacctcgaa atccatgggt
      841 gctccttgtt ggcggcgcct ggcgcgaccg ctcagtccct cgcgcacgag ggttttgcgg
      901 gagcgaattt cgaggcgcgc gccgccgatg tcaacggctc aaaaagcctc gcaagcacgc
      961 ggtgctgtgc ttcggctggg tcggctggcc gcttgctccg aagcccgagg cccggtagga
     1021 ctcacgcccc gaagtcatag cccgtccacg ggcccccaaa cgacgaggtc aacgtgtcca
     1081 agattgtcct gctcgccacc gaaaaaccgt tctccgcggc cgcgcgcgac gaggtcgtcg
     1141 ccatcatcaa gagcgccggt tacaccgcgc gcgttctcga gagctacaag ggcaagggac
     1201 cgctgctcga agcgatcgcc gacgcggacg ccgcgatcgt gcggagcgac atcatcgacg
     1261 ccgaggtgct aggcgccgcg aagaagctcg cgctcgtggt gcgcgcgggc gccggctacg
     1321 acaacatcga tacggccgcc gcgaagggca agagcgtcgc cgtgatgaac acgccgggcc
     1381 agaacgccaa cgccgtcgcc gagctcgcgt tcggcatgat ggtctacctc gcgcgcggca
     1441 agttcgacgg caagacgggc agcgagctcc gcggcaagac gctcggcctg cacgccttcg
     1501 gcgccgtcgg ccgcgccgtc gcgacgatcg cgaacggctt cggcatgacg gtgttcgcct
     1561 acgacccgtt cgtgaagccc gaggcgttca aggccgctgg cgtcgaagcc gtgggctcgg
     1621 ccgaggagct ctacaagcgc tcgcagtacg tgtcgctgca cgtgccggcg accgccgaga
     1681 ccaagaactc gatcggcaag aagctgctct cgctcatgcc gaagggcggc acgctcgtga
     1741 acacggcgcg caaggaaatc atcaacgagg ccgagctact cgaggctttc ggcgagcgcg
     1801 cggatcttcg ctacatctcc gacatcccgc cgagcgacgc gacgctggcc acgctgaagg
     1861 agaagttcgg cgcgcgcgtg tacgtgacgc cgagcaagat gggcgcgcag accgaggaag
     1921 cgaacgtgaa cgccggcctc gcggcggcgc gccagatcgt gggcttcttc gagcgcggcg
     1981 agcgccagtt catcgtcaat ccttgacgta ccctccccgt cggcctgacg cgcggggaac
     2041 gaccacctcc cgctcgccgt cgtcgctcgg cgcgttgctc gaacaagcac gcgacgtgag
     2101 cgcgcgagcg ggaggagtcg tgatcgatcg cgagacatgg cggcgtgccg tcggcgaacg
     2161 catcgccgcg cgcaccgagc ctggacggct ccgcaacggc gtgctgacgt tgcacgtcgc
     2221 gtcggcggct tgggcgcagg agctttcgtt ttttacgacc gacctgctag cgcgcgtgaa
     2281 ggagctcggc gtcgcggtga ccggtctccg cttccaagtg cggcccatcg cgggacgcgc
     2341 cgtcacggcc gccgccgctt cggcgccgcg cccgcgtgcc gccctgccgc ccgacatcga
     2401 agagcggctc cgcgccgtca gcgatcccgc gctccgtgcc gcgatcgccg aggctgccgc
     2461 gctcgggctc gcagcgcggg ctagctcagc accacgcgct cgaggcccgc gatccgttgc
     2521 agaacgaagc gctccgccgg gccgaacgcc gactgctgct cctcgagcac cgcgacgtaa
     2581 gccctgagcg ccgtgacgtg catgccgcgc gctttgcgca cgacgtcgta gagctgatcc
     2641 acgagcgcgc cgggcaggat ccgccgcaga acggtgtaga gctcgacgac gtagtcgagc
     2701 cagttcgcgc gcgaagtcgc gcccgcgatg cgcacggcgt aagaagccgc gcgctcggcg
     2761 acgggctgcg ggacgtcgcg gccttccttc gcctcacgca agatactctg caagacgccc
     2821 gagaggatgc gttcggcttc ctcgccgcga tccatcgcga gtactttgtc ggcgaccgag
     2881 ccgagcacgt cgaagacgtc gcccacgtgc gtctgatctt cgctcggggg gttctcgctc
     2941 gctagagcgt cgccgtgcag cgtctccgcc atttgccgtt cgtgaccggt cggcccgact
     3001 tcgcgcgcca agctgcggag cacgaattcg cgctggccta tttgcagcgt gtcgccctcc
     3061 ttcatgcgct ggctgccctc gacgcgatgc gcgttcacgt acaggccatt gacgctgccg
     3121 agatcgcgca cggtcacgga ctcttcagcg acgatgagct cggcgtggcg ccgcgagacc
     3181 atgctgtctt cgagcacgag atggcagctc gaactcctgc cgacgacgag cgtgccgcgc
     3241 cggagctcga cgttctgtcc ctcgtgctcg agccaaaagc gcttcgagcg accggcgggc
     3301 aggcttctcg tgtctcgctc gttcgccact agcctcgagt ttggcagtct tggaagaaaa
     3361 gatcacgagg gacttttccc gtttcaagcg agcgatcgct cgaggccctc caagcgactc
     3421 acgaggaaac gatcggcggg gctgagctcg ccctcacgct cacgaatggc cgccaaatag
     3481 gcgcgaagct cggcgacgtt cggttgcttg accttgcgta cgacgacgta gagctcgtcc
     3541 acgatggcgc tcgggcagag gcggccggcg gcgcggtaaa agcgataaac gcggtcgacc
     3601 cacgccgcgc tacccgccat attcgcgatt ttgagcgcgt agccgcacgc gcggtcgacc
     3661 agcgcggggt cgtgcttttt gccccgctcg acgtccgcga gcaggtgctc gagttggggg
     3721 ccgagtagcc gttccgcctc gtcgccacgc ccgagcgcga acgccttgtc ggcgagcgcg
     3781 cccaatagac cgaaggtgga catgcggaga gtaggagcgt gtactggcgc ctgcgccgcc
     3841 ggatcgcgcg gcagcgcgac ggacagctcg ctcgagccga cggcgatgcg atcgcccggc
     3901 gcgagcacgt gctcgcgtgt gatttttttt ccgttcacgc ggacgccgtt gcggctatcg
     3961 aggtcgacga gcgtcgcgat gctgcccgcg acgtcgatgg cggcgtgatg gcgcgacacg
     4021 agcggatcgt cgagcgcgag cgcggcgtcg tcggcacgcc cgatgatgaa acgcccatta
     4081 gggaggtcga actcgcggga a
//
LOCUS       DATIML010000223         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5243084, whole genome shotgun sequence.
ACCESSION   DATIML010000223 DATIML010000000
VERSION     DATIML010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5243084"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VLJ38_03890"
     CDS             complement(<1..560)
                     /locus_tag="VLJ38_03890"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSU38678.1"
                     /translation="MSPTLLTEWSRLLLGTLARAGVEHVVLSPGSRSTPFAWAALNEP
                     GLRCHSIWDERVAAFFALGQARVTGRPSLLLCTSGTAAANYYPALIEASLSHLPVLVL
                     TADRPFELQHASAPQAIDQIKLFGDSARAFFELGAPDAAPSALQGLVRSVSHAVHRSR
                     NENPGPVHLNARARKPLEPVTPEDASS"
     gene            complement(557..>1547)
                     /locus_tag="VLJ38_03895"
     CDS             complement(557..>1547)
                     /locus_tag="VLJ38_03895"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008909 - isochorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HSU38679.1"
                     /translation="DARFVLPELSYLKNKAGAWLCLVVRGGGWNRETFRTELEPRLTR
                     ALHALFSSAPVRESARELAREERTESSFAELVSAIQGEIKGGRAQKIVAARRVSLTLD
                     RELLPEVVQSRLRDDAPESTRFAFRVGHATFLGATPEQLVQKRGLELRTEAVAGSVSA
                     DDAASAKRLLESGKDIREHEFVVSEILRLLAPLTSELSPAPEREVHRLRTVLHLRTPI
                     HGKLREPSHVLQLVGRLHPTPAVGGVPTGAAIDFILEHEPDPRGWYSGPFGWFDESGD
                     GRFVVALRCGVVAGKHAELYAGAGVVSESNAPNEFAETRWKLAALLGALGVSA"
BASE COUNT          276 a          527 c          497 g          247 t
ORIGIN      
        1 gaagaagcat cttccggcgt taccggctcg agcggtttcc gcgcgcgagc attcaagtgc
       61 acgggccctg gattttcgtt tctcgacctg tggaccgcgt gcgagacgct gcgcaccaac
      121 ccctgtagcg cgctcggcgc agcgtcgggc gcgcccaatt cgaagaaagc gcgcgcagag
      181 tcgccgaaga gtttgatctg atcgatggcc tgcggcgcgc tcgcgtgttg cagctcgaaa
      241 ggccgatccg cggtcagcac caagaccggc aggtgcgaaa gcgatgcctc gatcagggcg
      301 gggtagtaat tggccgcggc cgtacccgag gtgcataata gcaagctcgg acgcccagtg
      361 acccgcgctt gaccgagcgc gaagaacgcc gccacccgct cgtcccagat cgaatggcag
      421 cgcagcccgg gctcgttcag cgcggcccaa gcaaacggcg tggagcgtga gcccgggctc
      481 aacaccacgt gctctacgcc cgctcgcgcc agagttccga gcagcagccg cgaccactcg
      541 gtcagcagcg tcgggctcat gcggaaaccc cgagcgctcc gagtaacgct gccagcttcc
      601 agcgtgtttc cgcaaactcg ttgggggcat tcgattccga gaccaccccg gctccagcgt
      661 agagttcggc gtgcttgccc gccaccacgc cgcagcgcag ggccaccacg aaacgtccgt
      721 cgccgctctc gtcgaaccag ccgaaggggc cactgtacca gccgcgcgga tccggctcgt
      781 gctcgaggat gaaatcgatt gctgcgcccg tgggcacgcc gcctacggcc ggcgtcgggt
      841 gtaggcgacc gacgagctgc agcacgtggc tcggctcgcg cagcttgccg tggatcggcg
      901 tacgcaagtg aagcaccgtg cgcaggcgat gcacctcgcg ttccggcgcc ggagagagct
      961 cgctcgtgag cggcgcgagt aagcgcaaaa tctcgctgac gacgaactcg tgctcgcgaa
     1021 tgtccttgcc gctttctagc agacgcttgg cagaggcggc atcgtctgcg ctaaccgacc
     1081 ccgcgacggc ttccgtgcgc agctcgagcc cgcgcttttg cacgagctgc tctggagttg
     1141 cgcccaagaa ggtggcgtgg ccgacgcgga acgcaaaacg cgtcgactcg ggcgcgtcat
     1201 cgcgcagccg actctggacg acttcgggca acagttcgcg atccagggtc agactcacgc
     1261 gccgtgcggc cacgatcttt tgtgctcgtc cgcccttgat ttctccttga atggcgctca
     1321 cgagctcggc aaacgaagac tccgtccgct cttcacgcgc aagctctcga gccgattctc
     1381 gaaccggtgc cgagctgaac agcgcgtgca acgcgcgggt caagcgcggc tcgagctcgg
     1441 tgcgaaacgt ctcgcggttc cagccgccgc cgcgcacgac caaacacagc caggccccgg
     1501 ccttgttctt caagtagctg agctcaggta gaacgaagcg ggcatcg
//
LOCUS       DATIML010000224         6027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3221999, whole genome shotgun sequence.
ACCESSION   DATIML010000224 DATIML010000000
VERSION     DATIML010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6027
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3221999"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VLJ38_03900"
     CDS             complement(<1..370)
                     /locus_tag="VLJ38_03900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38680.1"
                     /translation="MSPDRLVKAEASLRLFWSVRRVSAAAALLAAFGLSSKALAQPTE
                     AAPPPDVAPAPIPPVAPAPAVQPPAPVVIVAPAVMTVPVPATDVNAEPLAGVSDQSMF
                     LRSPDNMFQFFPSGRLQVDTY"
     gene            618..1232
                     /locus_tag="VLJ38_03905"
     CDS             618..1232
                     /locus_tag="VLJ38_03905"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU38681.1"
                     /translation="MAKPARSPPAKRGSLRSRLHDATRGVILDAMVEQLADTGAFDFS
                     MFELARRANVSARTIYRHFPTRDALFDALAARVDEELGPLEPPRTLDAAMALAKAQFE
                     RFDAHAELVTAELVTRQSFRPGARHARLVALQKAIGDTAPNLSELTRRHVAGVVTCLL
                     SADTWARLRHDLHLDGRGAGDAVAFAIDAIKRKLEAEQKKSKPR"
     gene            complement(1286..1933)
                     /locus_tag="VLJ38_03910"
     CDS             complement(1286..1933)
                     /locus_tag="VLJ38_03910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38682.1"
                     /translation="MKLSHIGISMVVAGCCTVVACGSDDDSTNGTGASAGKGGKGGSG
                     GSTSAGKGGSPAAGTGGSSTAGIGTGGTHTAGTGGTGTAGRGGTGNPGTGGTSSGNGG
                     ETNGGAAGASGEGGAGGDNGGTTAGGRTGFGGRNSGGRAGGGRNSGGRAGGGSSAGGS
                     SAGGASGGGRAAGGTSSGGRGGLGGRTGFGGRAGSGGLGGLGGLGGIESGGRAGG"
     gene            complement(2119..2940)
                     /locus_tag="VLJ38_03915"
     CDS             complement(2119..2940)
                     /locus_tag="VLJ38_03915"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: protein motif:HMM:NF001389.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HSU38683.1"
                     /translation="MVLPDLLKALVLGIVEGVTEFLPISSTGHLILAGSLLDFESEKA
                     KVFEIVIQTGAVLAVVWEYRARFARVIGGLGHDPMARRFATNIFIAFLPAAVLGLLLA
                     KHIKALLFRPIPVALAFIVGAFVILWAERREHATRIEHVDDITSWDALKIGAAQTLAL
                     IPGTSRSGATIIGGLLLGLSRKAAAEFSFFLAIPTLTAAAAYDAFKHRALFTSSDIGL
                     FGVGLVAAFVSAFLCVRWLLRYVSRHDFTAFAWYRIAFGFVVLGTAYAGLVHWSS"
     gene            2970..4133
                     /locus_tag="VLJ38_03920"
     CDS             2970..4133
                     /locus_tag="VLJ38_03920"
                     /inference="COORDINATES: protein motif:HMM:NF043005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCE4755 family polysaccharide monooxygenase-like
                     protein"
                     /protein_id="HSU38684.1"
                     /translation="MQRFIYCRLPAPPLNLEVIAMSRFVLNASTRRRTAGLAVATSVA
                     LLSSLAEAHFNLQAPPNWTTETSQGTPQKDWPCGNEGDPAATGPTTPYKPGDKVTIKL
                     AETVTHAGHYRVALATSGDMMDLPADMSRTDSGSMCEHDDMQATPTFPILADGLLEHT
                     QNQPLSGAQTFDVTLPSNVTCDKCVLQVREYMQGHSSAPETATQTNGCYYHHCAFISI
                     TAATGGGGMSGGGMSGGGPNGGAPSGGSGGTGGTLGMGGVSMGGAMGEAGRLMSAGGA
                     PGTAGAQSGGHPGTGSAGMPGTGGVVSGTGGSVGASGTSTNTGAAGASTGDSGGSLGS
                     SSGGTTSAPATQPSGGNDDGGCAVSPHGRSTPFGLAGALGVCIFGISFARRRR"
     gene            4362..4544
                     /locus_tag="VLJ38_03925"
     CDS             4362..4544
                     /locus_tag="VLJ38_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38685.1"
                     /translation="MTAHSLVVLRPRVRPPASGFRATLREVMAEVATFERAHARVAWG
                     ATIVGFVIGLGLRALG"
     gene            4609..5511
                     /locus_tag="VLJ38_03930"
     CDS             4609..5511
                     /locus_tag="VLJ38_03930"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSU38686.1"
                     /translation="MTSSRAHALVAGFGAVGVALLFALKPTSSPVYADAKAEAKAEAS
                     PARAKTAPAPANAAKPAPSTGCPSEMARVGATCMDRYEASLLRRNDDGSLVPHPNSAR
                     PTGGVFVAVSKAGVKPQGYISQLEAASACQNAGKRLCSLTEWYRSCRGDKNTLFPYGP
                     TYVHGRCNVNKPHLLSLLHGSDPNAWKYDTGFNDPELDQRDGFLAETGAYKDCVSSGG
                     VYDLVGNLHEWVADRVDASMRDKLPLTSGIRAKLSVNQGKGVFMGGFFSTLNQHGEGC
                     EFVTMAHEPGYHDYSTGFRCCKDP"
     gene            5666..>6027
                     /locus_tag="VLJ38_03935"
     CDS             5666..>6027
                     /locus_tag="VLJ38_03935"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU38687.1"
                     /translation="MTEEQLLEVLVVDDEPDMRALAARALTRSGCKVEAVSNAMDALA
                     LFKQGRSFSAVVTDLSMPGITGTEFLKLIREFDLDVPVIVVTGNPSLESAVAIIEYGG
                     FRYFQKPIDVEVLRHAVFS"
BASE COUNT         1066 a         2048 c         2020 g          893 t
ORIGIN      
        1 agtaggtatc gacctgcaag cgcccactcg ggaagaactg gaacatgttg tccggcgagc
       61 ggaggaacat gctttggtca ctcacgcccg cgagcggctc ggcgttcacg tccgttgcag
      121 gcacgggcac ggtcatcacc gcaggcgcga cgatgaccac gggcgccgga ggttgcacgg
      181 ccggtgctgg cgcgaccggc ggaatcggcg cgggcgcgac gtcgggcggc ggcgcggcct
      241 cggtcggctg ggccagcgcc ttcgaagaca gaccgaatgc cgcgaggagc gcagcagcag
      301 cgctcacgcg gcgaacggac cagaagagac gcaacgaagc ttcagctttc acgagacgat
      361 caggtgacat gcgcggccct tgtaacaaga ctcgtcatcg tcttgcgtga acaactggtg
      421 acaacgtttg gttcgagacg gaccgagctg gccagatggg ggacaccccg cgctcgcaaa
      481 tgcgagcttc gctgaaccgc ctgaccagtg gaacggcgtc ggaccgagcc gttgcccaac
      541 gcgccacctg gcccgcctac aaataccaaa tcgatacgac ttgacacgaa ccatgacgcg
      601 cttacatgcg ttgagtcatg gctaagcccg cgcggtcccc gccggcaaag cgcggctcgc
      661 tgcgcagccg cctgcatgac gcgactcgag gcgtgatcct cgacgcgatg gtggagcagc
      721 tcgcggacac gggcgccttc gacttctcga tgttcgagct cgcccggcgc gcgaacgttt
      781 cggcgcgcac gatctaccgg cacttcccga cgcgcgacgc gctgttcgac gcgctcgcgg
      841 cgcgcgtgga cgaggagctc ggcccgctcg agccgccgcg tacgctggac gcggcgatgg
      901 cgctcgcgaa ggcgcagttc gagcgcttcg acgcgcacgc ggagctcgtg acggcagagc
      961 tcgtgacgcg gcagagcttc cgcccagggg cacgccacgc gcgcctcgtg gcgctgcaga
     1021 aagcgatcgg agatacggcg ccgaacctga gcgaactcac gcggcgtcac gtagcgggtg
     1081 tcgtcacctg cctgctctca gccgacacct gggcgcgcct gcgccacgat ctgcacctgg
     1141 atggccgcgg cgctggcgac gccgtggcgt tcgccatcga cgccatcaag cgcaagctcg
     1201 aagccgagca aaagaaatcg aaaccgcgct gagcgctccc ccgtctcgtg cgtcgagaga
     1261 agagctcagc gcggcacaga cggcgtcaac cgcccgcgcg accgcccgat tcgatgccac
     1321 ccaaaccgcc gaggccgccg aggccgccgg accccgcgcg accgccgaac ccggtgcgac
     1381 cgcccaagcc accgcgacca ccgctgctgg ttccgccggc ggcacgacca ccgccgctgg
     1441 ctccgccggc gctgcttccg ccggcgctgc ttccgccgcc cgcacggcca ccggagttac
     1501 ggccgcctcc ggcgcgtcca ccggaattgc gcccgccgaa acctgtgcga ccgccagccg
     1561 tggtgccgcc gttgtctcca ccagcgccac cttcacccga cgcgccggca gcgccgccgt
     1621 tcgtttcacc gccattgccc gagctcgttc ctccggtgcc gggattaccg gtaccacccc
     1681 tgccggccgt gcccgtaccg ccggtgccgg cggtgtgagt gccaccggtg ccgattccag
     1741 ccgtcgagga gccgcctgtt cccgcggcgg gcgatccccc cttacctgcg ctcgtgctgc
     1801 cgcccgagcc gcctttgccg cctttaccgg cggacgcgcc ggtgccgttg gtggagtcgt
     1861 cgtcgctacc gcaggccacg accgtgcaac agcctgctac gaccatgctg atgccaatat
     1921 gagaaagctt catgggggat cctcggatct agttcggact tccgctgctg agtactcgta
     1981 cccacatgcg cgcacaagca ggcacgtgaa aaagacgcag gagtgacggt caacccggga
     2041 tacgccgctc gctaagctgg ggcaattttg ccatcgccgc gacgtacggc cgcccaagac
     2101 cttcacgcca gtcgaggcct aggacgacca gtgcacgagc cccgcgtacg ccgtgccgag
     2161 cacgacgaat ccgaaggcga tgcgatacca agcaaacgcc gtgaagtcgt ggcggctcac
     2221 gtagcgcaag agccagcgta cgcagaggaa cgccgagacg aaggccgcga cgagcccgac
     2281 accgaagagg ccgatgtcgc tcgacgtgaa gagcgcgcgg tgcttgaagg cgtcgtacgc
     2341 ggcggcggcc gtgagcgtcg gaatggctag aaaaaaggaa aattccgctg ccgctttgcg
     2401 cgagagcccg agcaagagcc cgccgatgat ggtcgcgccc gagcgcgagg tgccggggat
     2461 gagcgccaag gtttgcgccg caccgatttt gagcgcgtcc caagacgtaa tgtcgtccac
     2521 gtgctcgatg cgcgtcgcgt gctcgcgccg ctccgcccac aggatgacga acgcgccgac
     2581 gatgaacgcg agcgccacgg ggatcggccg aaaaagcagc gctttgatgt gcttggccag
     2641 cagcaagccg agcacggccg cgggcaagaa cgcgatgaag atgttggtgg caaagcggcg
     2701 cgccatcggg tcgtgcccga ggccgccgat gacgcgcgcg aagcgcgctc ggtattccca
     2761 gacgaccgca aggacggctc ccgtctggat cacgatttcg aagacctttg ccttctcgct
     2821 ctcgaagtcg agcagcgagc ctgcgaggat taaatggccc gtcgaagaaa tgggcagaaa
     2881 ctcggtgacg ccttcgacaa taccgagcac gagcgctttg aggagatcgg gcaagaccac
     2941 gagcgggcat cctacgcatg gcccgaccca tgcagcgatt catttattgc cgcctcccgg
     3001 cccccccgct aaacctcgag gtcatcgcga tgtcacgttt cgtcttgaac gcgagcacgc
     3061 gccgccgaac ggctgggctt gccgtcgcga cctcggtcgc cctgctttct tccctcgcgg
     3121 aggctcactt caacctccaa gcgcctccga actggacgac ggagacttcg cagggcactc
     3181 cgcaaaagga ctggccgtgc ggcaacgagg gtgatccggc agccaccggc ccgacgacgc
     3241 cctacaagcc cggcgacaag gtcacgatca aactcgcgga gaccgtcacg cacgcggggc
     3301 actaccgcgt cgcgctcgcg acgagcgggg acatgatgga cctgcccgcg gacatgtcgc
     3361 gcaccgacag cggcagcatg tgcgagcacg acgacatgca ggcgacgccc acgttcccga
     3421 tcctcgcgga cggcctgctc gagcacacgc agaatcagcc gctatcgggc gcgcaaacgt
     3481 tcgacgtcac tttgccgagc aacgtgacgt gcgacaagtg cgtgctgcaa gtgcgcgagt
     3541 acatgcaagg gcactcgagc gcgcccgaaa ccgcgacgca gacgaacggc tgttactacc
     3601 atcactgcgc gttcatctcg ataacggcgg ccacgggcgg cggcggaatg agcggcggcg
     3661 gaatgagcgg cggcgggccg aacggtggcg cgccgagcgg cggcagcggc gggacgggtg
     3721 gcacgttggg catgggcggc gtgagcatgg gcggcgcgat gggcgaagcc ggaaggctca
     3781 tgtccgcggg cggagctccc ggcacggcag gcgcccagag cggcgggcac cccggcaccg
     3841 gctcggccgg catgccggga acaggcggcg tggtcagcgg caccggcggc agcgtgggcg
     3901 cgagcggcac ctcgacgaac actggcgcgg ccggggcgag cacgggggac agcggtggct
     3961 cgctcggctc gagcagcggc ggaaccacca gcgcccctgc gacccagccc agcggcggca
     4021 acgatgacgg cggctgcgcc gtctcccctc acggcaggtc gacgcctttt ggcctcgcgg
     4081 gcgcactcgg cgtctgcatt ttcggcattt cgttcgcgcg acgccgccgc tgaaaaccgt
     4141 tcgagcggtg tcgtctgcgc gcggtcgccc acgcgtccga tgcgcccacc ggtgcgaggc
     4201 cgctgcccct ggggataacc gctccgtttg cacacgctgg ccgacgctga aaactgccgc
     4261 aaattcgagt ggttaccgca atgcggcggc ggaccgcctc tcgcccgacc caaattgttc
     4321 acaagtttgt cactcgaggt cttcgtcgcc atacttttgg aatgacggcg cattcgctgg
     4381 ttgttctgcg tccgcgcgtt cggccgccgg cgagcggctt ccgagccaca ctgcgggagg
     4441 tgatggccga ggtcgcgacg ttcgagcgcg cgcacgctcg cgtggcatgg ggtgccacca
     4501 tcgtggggtt cgtgattggc ctcgggctcc gcgccctggg ttgagcgggc tctccacggg
     4561 ccccggcctg ctggcgacaa tgggaaccgt cccgtagttt agaaagtgat gacgagcagt
     4621 cgcgcgcacg cattggtcgc cgggttcggc gccgtcggcg tcgcgctgct ctttgcgctc
     4681 aagccgacga gctcgccggt gtacgcggat gccaaggccg aagccaaggc cgaggcgtca
     4741 cccgctcgag cgaagacggc gcccgcaccg gcgaacgctg cgaaaccggc gccgagcacg
     4801 gggtgtccga gcgagatggc gcgcgtcggc gcgacctgca tggaccgcta cgaggcgagc
     4861 ctcttgcgcc gcaacgacga cgggtcgctc gtgccgcatc cgaactctgc tcgaccgacc
     4921 ggcggagtgt tcgtcgccgt atcgaaggcc ggagtcaagc cacagggcta tatcagtcag
     4981 ctcgaggccg cgagcgcctg ccagaacgcc ggcaagcggc tctgctcgct cacggagtgg
     5041 taccgcagct gtcgcggcga caagaacacc ctatttccct acggcccgac ttacgtccac
     5101 ggtcgctgca acgtcaacaa gccgcacctc ttgtcgctgc tccacggcag cgatcccaac
     5161 gcttggaagt acgacaccgg cttcaacgat cccgagctcg atcagcgcga cgggttcctg
     5221 gcggagaccg gggcctacaa agattgcgtg agctcggggg gcgtctacga tctggtcggc
     5281 aacctgcacg agtgggtcgc cgatcgcgtc gatgcatcga tgcgagataa gctcccgctc
     5341 acgagcggca tccgcgccaa gctgagcgtg aatcagggta agggcgtctt catgggcggc
     5401 ttcttcagca cgctgaacca gcacggcgaa ggctgcgagt tcgtgacgat ggcccacgag
     5461 cctggttatc acgactattc gacggggttt cgctgctgca aggacccgta agcgtgacta
     5521 gaaggcgctg cctggacatt taatcccggg cctcgaggcc ggcctgcttg gccggagcgc
     5581 gcgggggagt tagagtcgct ccggtgacgc acctcggagg tccgtgaatt cacgggcgca
     5641 gggcgaggtc gagagtgggc cgcgcatgac tgaagaacag ctgctggagg tgttggtcgt
     5701 cgacgacgag ccggacatgc gcgcactcgc cgcgcgcgcg ctcacgcgca gcggctgcaa
     5761 ggtcgaggca gtctcgaacg cgatggacgc gctcgcgctg ttcaagcaag ggcgctcctt
     5821 ttccgccgtg gtcaccgacc tcagcatgcc gggcatcacc gggaccgagt ttctcaagct
     5881 gatacgcgaa ttcgacctcg acgttcccgt gatcgtcgtc acgggcaatc cgtcactcga
     5941 gagcgccgtg gccatcatcg aatacggcgg tttccgctat ttccagaaac cgatcgacgt
     6001 cgaagtttta cgtcatgccg tgttctc
//
LOCUS       DATIML010000225         1651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5532804, whole genome shotgun sequence.
ACCESSION   DATIML010000225 DATIML010000000
VERSION     DATIML010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5532804"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..1259)
                     /locus_tag="VLJ38_03940"
     CDS             complement(111..1259)
                     /locus_tag="VLJ38_03940"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU38688.1"
                     /translation="MHTLLWLLWIPFAATTAWIIAGLAAVAGLTRRAHQLSDHPPPVS
                     VLKPLCGTDPGLRQNLESFFRQDHPDFELVFGVVDSRDPALEVVRALAREFPAVRCQI
                     VVHAGRGALNPKIDNLLGMLPRAKYDLALVSDSNVRAPAHYVRELATLYAAERPGLVT
                     NLFAGVGEDSLGAALENVQLSGFCAAGIALPSVLGDPVLVGKSALFSRRKLERLGGLR
                     RLSDVLAEDFVMGKTFSRAGGRIIVAPTVLENVTRTMTVRAMFARQLRWSMMRFRVLP
                     LAAALEPLTSPLALLPLVWVLLGPWAIAWAALMLGLRDLGGWLVLRGHKRWYLPILLA
                     PLRELLVLAVWCVAPLKQHVSWRGKRFRLGAGTLLYLEQRRVSRTSAA"
     gene            1456..>1651
                     /locus_tag="VLJ38_03945"
     CDS             1456..>1651
                     /locus_tag="VLJ38_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38689.1"
                     /translation="MSKELSSDTSDREALERPEHGARLLVRLELTDAVRADYSVSLAT
                     AAAGWRGRASVVELDGQVIVA"
BASE COUNT          307 a          527 c          585 g          232 t
ORIGIN      
        1 cgaagcggtg ccgcgggcgg agatcgatcg catggttgac ctcgggctca ccggtatcgc
       61 cgagttgatc gagatccaag gacgcgtgct gaccggcgcc ggggtcgagc tcaagcggct
      121 gatgtgcgac tgacgcgccg ctgctcgagg tagagcagcg tcccggcacc gagccggaag
      181 cgcttgccgc gccaggaaac gtgctgcttg aggggagcaa cgcaccagac cgcgagcacg
      241 agtagctcgc gcagcggcgc gagcaggatc ggcaagtacc agcgcttgtg cccgcgcagc
      301 acgagccagc cgccgaggtc gcgtagcccg agcatgagcg cggcccacgc gatggcccag
      361 ggcccgagca gcacccaaac gagcggcagg agagcgagtg ggctcgtcag cggttcgagc
      421 gccgcggcga gcggcagcac gcggaaacgc atcatcgacc agcgcaactg gcgcgcgaac
      481 atcgcgcgca ccgtcatcgt gcgcgtcacg ttctcgagca cggtcggcgc gacgatgatg
      541 cgaccgcccg ctcgcgagaa ggtcttgccc atgacgaaat cctcggcgag cacgtcggac
      601 aaacggcgca agccgccgag gcgctcgagc ttgcgtcgcg aaaacagcgc cgatttgccg
      661 accaagaccg gatcgcccag cacgctgggc agcgcgatgc ccgctgcgca gaagcctgaa
      721 agctgcacat tttcgagcgc ggcgccgagc gagtcctcgc cgacgccagc aaacaggttc
      781 gtcacgagac cgggccgctc cgcggcatag agtgtggcga gctcgcgcac gtagtgagcc
      841 ggcgcgcgga cgttgctgtc gctcacgagc gcgaggtcgt acttggcgcg tggcagcatg
      901 ccgagcaggt tgtcgatttt cggattgagc gcgccgcgtc ccgcatgcac gacgatctgg
      961 cagcgcaccg ccggaaactc gcgtgcgagc gccctcacga cctcgagcgc tgggtcccgc
     1021 gagtcgacca cgccgaagac gagctcgaaa tcgggatggt cttgtcgaaa gaagctctcg
     1081 aggttttggc gcagtccggg gtcggtgccg cagagcggct tgagcacgct gaccggcggc
     1141 ggatggtcgc tcagctgatg ggcgcggcgc gtcaagccag cgacggccgc caggcccgcg
     1201 atgatccaag ccgtggtcgc agcgaagggg atccagagta gccagagcag cgtatgcatg
     1261 ctttccgacc ttgtgaccta gcgaggagcg tgccaagcga agtcgggaaa ttggatcagt
     1321 aaattcaact gtttgtttca ctaacgcgaa gcgtcatgct cggcccggtg aggcgatttc
     1381 gcaccgctgg ttcaaccagt tcacacttag cagcccacgc gcggcccgca agccgcggtg
     1441 ctagtcgggc cgagcatgtc gaaggagctg agctcggaca cgagtgaccg cgaggctctc
     1501 gaacggcccg agcacggggc gcgcctcttg gttcgcctcg agctaaccga cgcggtccga
     1561 gccgattaca gcgtgagcct cgcgactgcg gccgcgggct ggcgcggacg agcgagcgtg
     1621 gtggagctcg acggtcaagt gatcgtggcc g
//
LOCUS       DATIML010000226         3354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_624669, whole genome shotgun sequence.
ACCESSION   DATIML010000226 DATIML010000000
VERSION     DATIML010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624669"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VLJ38_03950"
     CDS             complement(<1..272)
                     /locus_tag="VLJ38_03950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38690.1"
                     /translation="MKDLPPAFRDIPSGGELVEALDEAFSRHRGWIQATGFVEEVELK
                     LGSEGADVRRSFRGRFALASLGGPLGGPYGVTLARAAGDRVEVLAGV"
     gene            complement(269..1891)
                     /locus_tag="VLJ38_03955"
     CDS             complement(269..1891)
                     /locus_tag="VLJ38_03955"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38691.1"
                     /translation="MAAEALEPNRILAGRYRLEVRLGQGGMGSIWRAEHLVLQAPVAV
                     KLIDRDAVPDEDTLSRFMREAKAAASLRSPHVVQIIDYGVEGPLPFMVMELLEGETLA
                     QRLKRVRRLSRQDTARVLTHVGRAVGRAHEACIVHRDLKPENVFLVKNEDDEIAKVLD
                     FGVAKIDHALLGSEGTRTRTGSILGTPYYMSPEQAQGNKAVDSRSDLWSLGVIAFECL
                     TGQRPFYSDGLGDLVLTICVRDMPVPSDVAPVPLGFDAWFAKACARDPEQRFQTAREL
                     TDALREALGLDPKDAGTFDPPEIMVGSSRNPPSVPPPTTEAQTIVREPPVESSRRSRP
                     RAEGDAPTLAAAPGEQTIVDAAMPARTEALFGTTQHDVLPEPKNGTALLMIVAVVALG
                     AGLAGGLMFLRRPVHSGGLDNATLPAPAAPPVSASAAAEEEVEKPAKKPKKHDAAEGA
                     SAERAPAPVASATTAPSAAAADSGAQNTAPHVEHKPSAEPALLPTPSATASAPELEAP
                     WEKPAWAQPDNEIQVHRGPDQQDDKIVIPPEQ"
     gene            1947..2645
                     /gene="pgl"
                     /locus_tag="VLJ38_03960"
     CDS             1947..2645
                     /gene="pgl"
                     /locus_tag="VLJ38_03960"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HSU38692.1"
                     /translation="MVVPDVSVIPTDALAARAAEKIAQTLRKVTEVEGRACLALAGGT
                     TPRRVHEALAARSDVPWPLVHVYFGDERCVAPDHPDSNYRMAKESLFDRVALSPSQIH
                     RPVAELADREAAARAYEALLPARLDLIILGIGEDGHTASLFPGSPALNERERRYIPVV
                     GPKPPPERLTLTPPALETAGALLMLAVGKGKAEAVARALEGPWDPQATPSQLARRGSW
                     FIDADAARLLTVAR"
     gene            2657..3046
                     /locus_tag="VLJ38_03965"
     CDS             2657..3046
                     /locus_tag="VLJ38_03965"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSU38693.1"
                     /translation="MLGEAFARQLAHEITEAWNAHDLERILAHYEEDVTLTSPYAAER
                     YDDPTGVVRGKAALRAYFALGLAAYPELHFELVDVLWGVSSVVLYYVNQRGTLTAEVL
                     ELAPSGRVARVLANYGSERGRAQLPVL"
     gene            complement(3028..>3354)
                     /locus_tag="VLJ38_03970"
     CDS             complement(3028..>3354)
                     /locus_tag="VLJ38_03970"
                     /inference="COORDINATES: protein motif:HMM:NF017946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HSU38694.1"
                     /translation="AVIYTGVLVLVGALTFRIVGPWVTHLFTVHQLFNTSRYPISIYP
                     RWLHVLVLYVVPFGAAIFVPADYLRGHGSLWQAVLVPPLAALAVAFAAKTAWDAALRG
                     YQSTGS"
BASE COUNT          527 a         1132 c         1150 g          545 t
ORIGIN      
        1 acgcccgcga gcacttcgac gcgatctccc gccgcgcgcg cgagcgtcac gccgtaaggg
       61 ccgccgagcg gcccaccgag actcgcgagc gcgaagcggc cgcgaaagct ccgccgcacg
      121 tcggcgcctt cactgccgag cttcagctcg acctcttcga cgaagccggt cgcttggatc
      181 cagccacggt gacggctgaa cgcttcgtcg agcgcttcga cgagctcgcc cccgctcgga
      241 atgtcacgga atgccggcgg caaatccttc attgttcggg cgggatcacg attttatcgt
      301 cttgttgatc cggaccgcgg tggacctgaa tttcgttatc gggctgcgcc cacgcgggct
      361 tttcccacgg cgcttccagc tccggcgccg atgccgtagc ggacggcgtc ggtagcaagg
      421 ccggctcggc gctcggcttg tgctcgacgt gcggagccgt gttctgcgcg ccggagtcgg
      481 cggcggccgc gctcggcgcg gtcgttgcgg acgcgacggg cgccggggct cgctctgcgc
      541 tcgcgccttc ggccgcgtcg tgcttcttcg gcttcttcgc gggtttttcg acttcctctt
      601 cggcggcggc gctggccgag acgggcggcg ccgcgggcgc cggcaaggtc gcgttgtcga
      661 gaccgccgct atgcaccgga cgccgcagga acatgagtcc accagcgaga ccggcgccga
      721 gcgccaccac ggcgacgatc atgaggagcg ccgtgccgtt cttcggctcg gggagcacgt
      781 cgtgctgcgt cgtgccgaag agcgcttctg tccgcgccgg catagcggcg tcgacgatcg
      841 tctgctcacc cggcgctgcc gcgagcgtcg gagcgtcacc ctcggcgcgc ggacgcgagc
      901 ggcgcgacga ctcgacgggc ggttcgcgca cgatggtttg ggcttccgtc gtcggcggcg
      961 ggacgctcgg cggattgcga ctgctcccca ccatgatttc aggcggatcg aaggtgccgg
     1021 cgtctttggg gtcgagaccg agcgcttcgc gcagggcgtc ggtgagctcg cgcgccgttt
     1081 gaaagcgctg ctcgggatcc cgcgcgcacg ccttggcgaa ccaggcgtcg aaaccgagcg
     1141 gcacgggcgc cacgtcggac ggcacgggca tgtcgcgtac gcagatcgtg agcacgagat
     1201 cgcccagacc gtcgctgtaa aacgggcgtt ggcccgtgag gcactcgaac gcgatcacac
     1261 cgagcgacca caaatccgag cggctatcga cggccttgtt cccctgcgcc tgctcgggac
     1321 tcatgtagta cggcgtgccg aggatcgaac cggtgcgcgt gcgcgtgccc tcggaaccga
     1381 gcagcgcgtg atcgattttg gcgacgccga agtcgagcac cttggcgatc tcgtcgtcct
     1441 cgttcttcac gagaaagacg ttctccggtt tcaggtcgcg gtgaacgatg caggcctcgt
     1501 gcgcgcgccc cacggcacgc ccgacgtgcg tgagcacacg cgccgtgtct tgccgcgata
     1561 gtcgccgcac gcgcttgagc cgctgcgcca gggtttcccc ttcgagcagc tccatcacca
     1621 tgaacgggag cggcccctcg acgccgtagt cgatgatttg aaccacgtgg gggctgcgga
     1681 gcgaagccgc ggcttttgcc tcgcgcatga aacgcgagag cgtgtcctcg tcgggtacgg
     1741 cgtcgcgatc gatcagcttc acggcgacgg gagcctgtaa aaccaggtgc tcggcgcgcc
     1801 agatggagcc catgccgccc tgcccgagcc ggacctcgag tcggtagcgt ccggctagaa
     1861 tccggttcgg ctccagggct tcggccgcca tgctaggaat ccgcaccata gcgccccggg
     1921 ccgccgggcg cactcgagga ggcacgatgg tcgttccgga cgtgagcgtg attccaaccg
     1981 acgcacttgc tgcgcgtgcg gcggaaaaaa tcgctcagac gttgcgcaaa gtcactgaag
     2041 tggagggacg tgcctgcctc gcccttgcag gaggtacgac accgcggcgc gttcatgaag
     2101 cgctcgcggc gcgtagcgac gtgccttggc cgctcgttca cgtctacttc ggtgacgaac
     2161 gttgcgtcgc gcccgatcac cctgacagca attatcgaat ggcgaaggag tcgctcttcg
     2221 atcgagttgc gctctcgcct tctcaaatcc atcgccccgt cgccgaactc gccgaccggg
     2281 aggccgcagc ccgcgcctat gaagcgttgc tgcccgcccg gctcgacctc attatcctcg
     2341 gaattggcga ggatgggcat acagcctcat tattcccggg ttcaccggcc ctgaacgagc
     2401 gagagaggcg ttacattccg gtcgtcggtc caaaaccccc gcccgagcgc ctcaccctga
     2461 cgccgccggc cctcgagacg gccggcgcgc tcctcatgtt ggcggtcggt aagggcaaag
     2521 ccgaggccgt tgcgcgcgca ctcgaaggac cctgggaccc gcaggcgacg ccctcgcagc
     2581 tcgcgcgccg aggtagttgg ttcatcgatg ccgatgccgc gcggctgctc acggtcgcgc
     2641 gctgagagtg acgacgatgc tcggcgaagc gttcgctcga cagctcgcgc acgaaatcac
     2701 cgaggcctgg aacgcgcacg atctcgagcg catcctcgcg cactacgagg aggacgtgac
     2761 gctcacgtcg ccgtacgccg ccgaacgcta cgacgatccg acgggcgtgg tgcgcggcaa
     2821 ggcggcgttg cgcgcgtatt tcgcgctcgg gctcgcggcc tacccggagc ttcacttcga
     2881 actcgtcgat gtgctctggg gcgtttcgag cgtcgtcctc tattacgtca atcagcgcgg
     2941 cacgctgacg gcggaggtgc tcgagctcgc gccgagcggg cgcgtcgcgc gggtgctcgc
     3001 gaattacggc agcgagcggg gtcgcgctca gctgcccgtg ctctgatagc cgcggagcgc
     3061 cgcgtcccaa gccgtcttcg cggcgaacgc gacagccaga gccgcgagcg gcggcacgag
     3121 cacggcttgc cacagggagc cgtggccgcg caggtagtcg gcgggcacga agatcgcggc
     3181 gccgaagggc acgacgtaca gcacgagcac gtgcagccag cgcgggtaga tggaaatcgg
     3241 atagcgggag gtgttgaaca gctggtggac ggtgaaaagg tgcgtgaccc agggtccgac
     3301 gatgcgaaac gtcagcgcac ccacgagcac caaaacaccc gtgtaaatca cggc
//
LOCUS       DATIML010000227         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_334887, whole genome shotgun sequence.
ACCESSION   DATIML010000227 DATIML010000000
VERSION     DATIML010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334887"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="VLJ38_03975"
     CDS             <1..783
                     /locus_tag="VLJ38_03975"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSU38695.1"
                     /translation="NAVLVVTGDVDADGIEKAAARAFGNWRGARPARPSFSDARGPNG
                     RKILVVDRPGSTQSQVLVGALGPERRSEEYPALMTANQILGGGVAGRLFLDVREKRSL
                     AYNTSSWVEEPAHGPMPLVLSAGTQTAKTADTVAALLEHFDRMSTTAPTGEELERGTR
                     FLSDSFAFKMETAGAVADLTGRLIVLGLPDETYDEYRHAVRELEPEAVARAASHAYRH
                     DSLVVVVAGDAATIASTLTRFGTVAVLDPERSFAIAKTLPAH"
     gene            930..1433
                     /locus_tag="VLJ38_03980"
     CDS             930..1433
                     /locus_tag="VLJ38_03980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38696.1"
                     /translation="MRRLHVVFALALATSLAGCAGGSDDDEVAPPKTSPSPLEKLTVS
                     IYPAWGTTPSTQAVDASSHELSWNYFQLNTDFTHTTLEQGSRTLTDTEFRSVTDALAR
                     VQVTHGNSCGFDDEVVTLDVQNEDGMDSYANDFYAGCPGELQDGRTFASGVEELADVT
                     RALAPQE"
BASE COUNT          303 a          608 c          557 g          261 t
ORIGIN      
        1 aacgccgtgc tcgtcgtcac gggcgacgtc gacgcggacg gcatcgagaa ggccgccgcg
       61 cgcgccttcg gcaactggcg tggcgcacgc ccggcgcggc cgagcttcag cgacgcgcgg
      121 ggcccgaacg gccgcaagat cctggtcgtc gaccgccccg gcagcacgca gagccaagtc
      181 ctcgtcggcg cgctcgggcc cgagcgccgc agcgaagagt accccgcgct gatgaccgcc
      241 aatcagatcc tcggcggcgg cgtcgcgggg cggctattcc tcgacgtgcg tgaaaaacgc
      301 tcgctcgcct acaacacgag ctcttgggtc gaagagcccg cgcacggtcc gatgccgctc
      361 gtgctctcgg ccggcacgca aacggcgaag accgccgaca ccgtcgcggc gctgctcgag
      421 catttcgacc gcatgagcac tacggccccc acgggcgaag agctcgaacg cggcacgcgt
      481 ttcctctcgg acagcttcgc cttcaagatg gaaacggctg gcgccgtcgc cgatctcacg
      541 gggcgcctca tcgtgctcgg cctgcccgac gagacgtacg acgagtaccg ccatgccgtc
      601 cgcgagctcg agcccgaagc cgtcgcgcgc gcggcatccc acgcgtaccg ccatgactcg
      661 ctcgtcgtgg tcgttgcggg cgacgccgcc accatcgcga gcacgctcac gcgtttcggt
      721 acggtcgccg tgctcgatcc ggagcgttcg ttcgcgatcg cgaagacact gccggcacac
      781 tgagtcgcac cgcaaaccga gtctcgccga tcgcggggac aaccggagtt ggcacagcgt
      841 ggcacggcga atcgctcact ttcgcgggtt ttgcggtgcc cggagcgtgg cccaagcttt
      901 gcttgaaacc aagcgggagc tgaatttcga tgcgacgact ccacgtggtc tttgccctcg
      961 cgctcgcaac gtcactcgcc ggctgcgcgg gcgggagcga cgacgacgag gtcgcaccgc
     1021 ccaagacttc cccgtcccca ctcgagaaac tgacggtctc catctacccc gcctggggaa
     1081 cgaccccaag cacgcaagcc gtcgacgcga gctcgcacga gctctcgtgg aattacttcc
     1141 agctaaacac cgatttcacc cataccacgc tcgagcaagg cagccgcaca ctgacggaca
     1201 cggaatttcg ctccgtgacc gacgccctcg cgcgagtcca agtgacgcac ggtaatagct
     1261 gcggcttcga tgacgaggtg gtcacgctcg acgtgcaaaa cgaagacggc atggactcct
     1321 acgcgaacga cttttacgcg ggttgcccgg gagagctaca ggacggtcgc accttcgcga
     1381 gcggcgtcga ggagctcgcg gacgtcacgc gagcactcgc cccgcaagag tgaggcagag
     1441 cctcgggttg ccgacggccg tccgtcgtcg cgcggtcgcc gagcagaatt tctcctcgcg
     1501 ctcggtcagc cgccgtagtg cacagcctca ggacatcctg ggcgcgagct atcgagagcg
     1561 gcgcctcgtg agcgctgagc cacgcactac cggtggagaa cctcgggacg tctcgcccca
     1621 ggaggtccgg agctcgggat tacctcggga cgagctgtgc gcgcccatgg gatgcccact
     1681 gaacaagctc ggggttacgg tgagcaggct tggctttttg ttcagcgcc
//
LOCUS       DATIML010000228         3940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5244151, whole genome shotgun sequence.
ACCESSION   DATIML010000228 DATIML010000000
VERSION     DATIML010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3940
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5244151"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="VLJ38_03985"
     CDS             <1..635
                     /locus_tag="VLJ38_03985"
                     /inference="COORDINATES: protein motif:HMM:NF019140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSU38697.1"
                     /translation="SSYQVALTVCERCRQGRQPGRGELVQVSQAVVDMAECDGQHLGH
                     LETSVEPRAHVGTAKKRRRAMQSIPPALRRQVLRRDGGRCQVPGCRHATFVAVHHLRP
                     RSEGGANTLENLVTLCGAHHRASHAGKLSSEGAPSEGLTFLHADGTPYGHAPSPAIAE
                     LRASAYRALTHLGFRESEAKWALARAPVTANVTLQDLIRQTLRELARDRH"
     gene            complement(1068..1394)
                     /locus_tag="VLJ38_03990"
     CDS             complement(1068..1394)
                     /locus_tag="VLJ38_03990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38698.1"
                     /translation="MFYVFLVLVGIAGIGVYVLFIFNLVPGVQDERLGVLEPLPPDVG
                     QWHADTESAEGREAAAQGLVREVRHYFYEHGKKLVLQVRYKQKDTGEIVRVDPERPVK
                     RKRVRV"
     gene            complement(1409..2623)
                     /locus_tag="VLJ38_03995"
     CDS             complement(1409..2623)
                     /locus_tag="VLJ38_03995"
                     /inference="COORDINATES: protein motif:HMM:NF016643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38699.1"
                     /translation="MNVPAVQANPADVVLTFLESVGRRAEAELYLRLFRQLSKESFAL
                     IAPGAQVLRDGTGALVEQIRFLADLDLFAPIVLGLFDAGSMAVPAERVARRITAAGLV
                     PYVHTMDEPGLGEKLREELRAERIPIVYFPQVEGETVDQRTVALGMLARDLDTRKIVL
                     LRRRGGLSARGDRPLELGPGHLMPSVGGWISVVNLRADRTALLASRRLSKRDTELLDC
                     ANRLIGLVEPNPLLVSVASPLNLMKELFTVKGAGTLVKRGTPITRHDSYATLDVPRLR
                     ALVEASFGRALQPDYFERPPLAVYLDEQYRGAAIFLPGNSVAYLSKFSVEPQAQGEGV
                     GNDLWQAFCRDFPSFVWRTRRDNAIVPWYLGVADGMARRPAWYVFWRGVEPERIATAI
                     AEAEARPSDFTF"
     gene            complement(2620..>3940)
                     /locus_tag="VLJ38_04000"
     CDS             complement(2620..>3940)
                     /locus_tag="VLJ38_04000"
                     /inference="COORDINATES: protein motif:HMM:NF025673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4380 domain-containing protein"
                     /protein_id="HSU38700.1"
                     /translation="VALASGCSSGDDDAAGGGNKTSSGATGGTTGGTGTAGQGGTGAT
                     GGTTGGGMGGTSATGGAGGTGGSTGGSGGSGGTGGSTGGSAGAATGGATAGGMGGSAG
                     AAAGSPATGGAPAGGMAGSLGSGGAAAGNGGGGMPAVTLVTPIMRSSTSYVLEFGDTY
                     FEVNPAVGARVVDVHLKGGTNLLGHGMDADNMGSTFWPSPQAAWTWPPTGDSSIANIN
                     SKPYMATADATSMTLVGMAASVVGLSVTKKFAADLTQEAVIATYTMIGTAAGKSAAPW
                     EVTRFAQSGVTFFPSGGTVTTAKNTANNMDPAPTTTSAGCQWVSSPGVFASASSKDQL
                     LVLNGVNNWLAHADAGWVVVKKFTNTPASMIATGEGEIDIYMNNPGNSGNPLPYMEVE
                     EQGPYGAVGQGQMVNWTVIWFVRKLPDGVTATAGNQQLVDFVKSIVQ"
BASE COUNT          614 a         1434 c         1245 g          647 t
ORIGIN      
        1 gctcgagtta tcaggtggcg cttaccgtgt gcgagcgttg ccggcagggc cggcagccgg
       61 gccgcgggga gctcgtccag gtgtcgcagg cagtggtcga catggccgag tgcgatgggc
      121 agcacctcgg gcatctcgaa accagcgtcg aaccgcgcgc ccacgtgggc acagcgaaga
      181 aacgcaggcg cgcgatgcaa tccatcccgc ctgcgctccg gcgccaggtg ctgcgccgcg
      241 acggtggacg atgccaggtg cccggctgtc ggcacgctac ttttgtcgct gtgcaccacc
      301 tccggcctcg ctccgaaggc ggcgcgaaca cactcgagaa tctcgtcacc ctgtgcggtg
      361 cgcaccaccg tgcaagccac gccggaaagc tttcgagtga aggggcaccg tccgagggtc
      421 tcactttcct gcacgcggac ggcactccgt acggacatgc gccgtcgccc gctatcgccg
      481 agctacgcgc gagcgcctat cgcgccctca ctcacctggg cttccgcgag tcggaggcga
      541 aatgggcgct cgctcgtgct cccgtcacgg ccaacgtcac cctccaagac ctaatccgcc
      601 aaacgctgcg cgagctcgct cgagaccggc actgatcctt cggctcggta cgcaccgccc
      661 gcccggcccc gccccggtgt ggctcagcgt gtctgctcag gcgcggtcgc ctcgcgcgat
      721 gctgccgtcg cacccgcccg atgttgcccg atgccgcccg atgttgcccg atatcgcccg
      781 cgccccccgc gaacgcaaag cgggcgcttg gcgggccggg cggcgccgct cgtagcgggg
      841 gcaactctcg acttcgcccg ctgatcgcgc cgttctgagc gcccgttgcc aacgcggaga
      901 tccgatgaat catgagtccg cagtgcgcga gcaccgctca acgcgccccc acttcgactc
      961 ccaaccccac tcttccacca cctcaccccc aaacgcgctt ccttcccgcc agctctagcc
     1021 ctgcccctgc cccacatcac acgcctcact tttttccggc ccgctcgtca gacgcgcacg
     1081 cgcttacgtt tcacgggccg ttcggggtcg acacgcacga tctcgcccgt gtctttctgc
     1141 ttgtagcgga cctggagcac gagcttctta ccgtgctcgt aaaagtagtg ccgcacttcg
     1201 cgcacgaggc cttgcgccgc ggcttcccgc ccctccgccg attcggtgtc ggcgtgccac
     1261 tggcctacgt cgggcggtaa cggctcgagc acgcccaggc gctcgtcctg gacgccgggc
     1321 accagattga agatgaagag gacgtagaca ccgatgcccg cgatgcccac caacaccaaa
     1381 aacacgtaga acatgtcgtg gtcgaagttt agaacgtaaa gtcgctcggt cgcgcctcgg
     1441 cctcggcgat cgccgtcgcg atccgctcgg gctcgacgcc gcgccagaac acgtaccacg
     1501 cgggcctgcg cgccataccg tcggcgacgc ccagatacca cggcacgatc gcgttatcgc
     1561 gccgcgtgcg ccagacgaaa ctcgggaaat cacggcaaaa cgcctgccac aagtcgttcc
     1621 ccacgccttc gccttgcgct tggggctcga ccgagaactt gctcaaataa gccacggaat
     1681 tgccgggcag aaagatcgcg gcgccgcggt attgctcgtc gaggtacacg gcgagcggcg
     1741 ggcgctcgaa gtagtccggc tggagcgcgc gaccgaagct tgcttcgacg agcgctcgca
     1801 accgcggcac gtcgagcgtc gcgtacgaat cgtgccgcgt gatgggcgtg ccgcgcttca
     1861 cgagcgtacc ggcgcccttc accgtgaaga gctctttcat caggttgagc ggcgacgcca
     1921 cgctcacgag cagcgggttc ggttcgacga gcccgatcaa gcggttggcg cagtcgagca
     1981 gttcggtgtc gcgcttgctc aagcgccggg aggcgagcaa ggccgtgcga tcagcccgca
     2041 gattgacgac ggaaatccag ccgcccacgc tcggcatcaa gtgcccagga ccgagctcga
     2101 gcgggcggtc accgcgcgcg gagagcccgc cgcggcgccg cagcagcacg atttttcgcg
     2161 tgtcgagatc gcgcgcgagc atgccgagcg cgaccgtgcg ctgatcgacc gtctccccct
     2221 cgacctgcgg gaaatagacg atcgggatgc gctcggcgcg gagctcctcg cgcagtttct
     2281 cgccgagccc cggctcgtcc atcgtgtgca cgtaggggac gagaccggcc gccgtgatcc
     2341 ggcgcgccac ccgttccgcg ggcacggcca tggaacccgc gtcgaagagg ccgagcacga
     2401 tcggcgcgaa cagatcgagg tcggcgagaa agcggatctg ctcgacgagt gcgcccgttc
     2461 cgtcacgcaa aacctgcgcg cccggcgcaa tcagcgcgaa gctctctttc gagagctggc
     2521 gaaagagacg gagatagagc tcggcttcag cccggcgtcc gacgctctcg agaaaggtga
     2581 ggacgacgtc ggccgggttc gcctgaacgg cgggtacgtt cactggacga tgcttttgac
     2641 gaagtcgacg agctgttgat tgcccgccgt ggccgtcacg ccatccggga gctttcggac
     2701 gaaccagatc accgtccagt tcaccatctg accttggcca accgcgccgt acgggccctg
     2761 ctcctcgact tccatgtacg gaagcgggtt gccggagttg cccgggttgt tcatgtagat
     2821 gtcgatctcg ccctcgcccg tcgcgatcat gctcgccggc gtattcgtga acttcttcac
     2881 gacgacccag ccggcgtcgg cgtgggcgag ccaattgttg acgccgttca ggacgagcaa
     2941 ttgatccttc gacgatgcac tcgcaaagac gccgggcgag gagacccact ggcagccggc
     3001 gctcgtggtc gtgggcgccg ggtccatgtt gttggccgtg ttcttggccg tcgtcaccgt
     3061 gccaccactc ggaaagaagg tgacgccgct ctgcgcgaaa cgggtgacct cccacggtgc
     3121 cgcgctcttg cccgcggccg tgccgatcat cgtgtaggtc gcgatgacgg cttcctgcgt
     3181 gagatcggcc gcaaacttct tcgtgacgct gagtccgacg acgctcgccg ccatgccgac
     3241 gagcgtcatg gacgtggcgt cggccgtggc catgtagggc ttgctgttga tgttggcgat
     3301 gctgctgtcg cccgtgggcg gccaggtcca ggccgcttgc gggctcggcc aaaaggtcga
     3361 acccatgttg tcggcgtcca tgccgtgccc gagcagattg gtcccgcctt tgaggtgcac
     3421 gtccaccacg cgagcgccga ccgcaggatt gacttcgaag taagtgtcgc cgaattccag
     3481 cacgtagctc gtcgagctac gcatgatggg cgtcaccagc gtcactgctg gcataccgcc
     3541 gcctccattt ccggcagcgg cgccgccgct acctaagctt cctgccatgc cgcccgcggg
     3601 cgctccgccg gtcgccggcg aacctgctgc agctcctgcc gaaccgccca tgccgcccgc
     3661 ggttgctccg cccgttgccg cgcctgccga gccgcccgtc gagccaccgg ttccgcccga
     3721 gccgcccgag ccgccggtcg acccgccggt tccacccgcg ccgcccgtcg cgctcgtgcc
     3781 tcccatgccg ccgcccgtcg tgccgcccgt cgcgcccgtg ccgccttgac ccgcggtgcc
     3841 cgtaccgccg gtcgtgccgc ccgtcgcacc gctgctcgtc ttgttgccgc cgccggccgc
     3901 gtcgtcatca cccgacgagc accccgacgc cagcgccacg
//
LOCUS       DATIML010000229         1719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5244445, whole genome shotgun sequence.
ACCESSION   DATIML010000229 DATIML010000000
VERSION     DATIML010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5244445"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..>1719
                     /locus_tag="VLJ38_04005"
     CDS             110..>1719
                     /locus_tag="VLJ38_04005"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38701.1"
                     /translation="MRAAQDPSAAPALAGESSKIKPAAERQLGAQARPTIKHKAQAKA
                     ENRREVRVSLQIPEALRPLLAKKIDERIARNIAATKALRSEAHDLLEKFIAESPADAT
                     EMPEALVRIGELEWEESRDKFLKEFQAWEKTPVDTRGDPPEQDYARPRARFLRVLKNY
                     KTFKEYDLALYIDGFLANESGKPDEALGRFNKILEWFPKSRFVPDAHMMRAEFEFTQD
                     APNYQHAYDEYEQVLKYKDTELYDIALFKSAWTLWRLGRTKEAAQRFLQVFQATEEGS
                     ANAKKRSRNELAELQNEALKNLVAVFVEDEKNSAEDMYKFLVQAGGDKFAGRIVRALA
                     EALYDQAQYERGVEAYKLLLKLEPTSPDAYRYVLQIAAADSTMERWKLLDDDYKRALK
                     DYVEPLPVKQGQPPPQRSAWLQVQTPATRGESETAVEKQLREDAVGLHAKAQADKVSR
                     AEFVAAAALYRTYLSRFGAKAQAYDVSYNLADICFYRLEDAICAADAYLGAVRMKPNG
                     PLARTALYNALASLEVARAAEFEAAKKAG"
BASE COUNT          338 a          540 c          583 g          258 t
ORIGIN      
        1 caagaagatc ttcccgacct tccgtcttcc tgtgaacctc cggagtcgcg ggcgagccgc
       61 gaatcttcaa atcgccgtct ttggggtcgc gctcgcgttt cctgccgtag tgcgagccgc
      121 gcaggaccca tccgcggcgc ccgcgctcgc gggcgagtcc tctaaaatca agccggccgc
      181 ggagcgccaa ctcggcgcac aggcgcgtcc gaccatcaaa cacaaagccc aggccaaggc
      241 cgagaatcgc cgggaagttc gcgtcagctt acagatcccc gaggcgctcc ggccgctgct
      301 cgcgaagaag atcgacgagc gcatcgctcg caacatcgcg gccacgaaag cgctgcgcag
      361 cgaggcgcac gacttgctcg agaagttcat cgccgagtcg cccgcggacg cgaccgagat
      421 gccggaggcg ctcgtgcgta tcggcgagct cgagtgggaa gagtcgcgcg acaagttctt
      481 gaaggagttt caggcgtggg agaagacgcc ggtcgataca cggggtgatc cgccggagca
      541 ggactacgcg cggccgcgcg cgcgctttct gcgcgtgctc aagaactaca agacgttcaa
      601 ggagtacgat ctcgcgctct acatcgacgg cttcctcgcg aacgagtcgg gcaagcccga
      661 cgaggcgctc gggcgcttca acaagatcct cgagtggttt ccgaagagtc gcttcgtgcc
      721 cgacgcgcac atgatgcgcg ccgagttcga gttcacccaa gacgcgccga attatcagca
      781 cgcgtacgac gagtacgagc aggtgctgaa gtacaaggac accgagctct acgatatcgc
      841 ccttttcaag agcgcgtgga cgctctggcg actcggacgc accaaggaag cggcgcagcg
      901 gtttttgcag gtgttccagg cgacggagga gggctcggcg aacgcgaaga agcgcagtcg
      961 taacgagctc gccgagctgc aaaacgaagc gctcaagaac ttggtcgccg tgttcgtcga
     1021 ggacgagaag aacagcgccg aggacatgta caaattcctc gtgcaggcgg gcggcgacaa
     1081 gttcgccggg cgcatcgtgc gcgcgctcgc ggaggcgctc tacgaccaag cgcagtacga
     1141 gcgcggcgtc gaggcgtaca agctgctctt gaagctcgag ccgacgagtc cggacgcgta
     1201 ccgctacgtg ctgcagatcg cggcggcgga ttcgacgatg gagcgctgga agctcctcga
     1261 cgacgactac aagcgcgcgc tcaaagatta cgtcgagccc ttgcccgtga agcagggcca
     1321 gccgccgccg cagcgttcgg cgtggctgca ggtgcagact ccggcgacgc gcggggagtc
     1381 ggagacggcc gtcgagaagc agctgcgcga ggacgccgtg ggcctgcacg cgaaggcgca
     1441 agccgacaag gtgagccgcg ctgagttcgt ggcggcggcg gcgctttacc gtacgtactt
     1501 gtcgcgcttc ggcgcgaaag cgcaggcgta cgacgtgagt tataacctcg ccgatatctg
     1561 cttttatcgg ctagaagacg cgatttgcgc ggcggacgcg tatctcggcg ccgtgcgcat
     1621 gaagccgaac ggaccgctcg cgcgcacggc gctctacaac gcgctcgcgt cgctcgaggt
     1681 cgcgcgcgcc gccgagttcg aggccgcgaa gaaggccgg
//
LOCUS       DATIML010000230         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1779241, whole genome shotgun sequence.
ACCESSION   DATIML010000230 DATIML010000000
VERSION     DATIML010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1779241"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..517)
                     /locus_tag="VLJ38_04010"
     CDS             complement(<1..517)
                     /locus_tag="VLJ38_04010"
                     /inference="COORDINATES: protein motif:HMM:NF018597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HSU38702.1"
                     /translation="MSGRSDSLHPRCGRRQFAVVALLATAALGFSETDAGRERAEAWA
                     RWNAAHDDAYPLDDILRWLPDGERPACDKSTIVAYRGTTIRYAGAVCVHPAFAERLAR
                     FETVVAEVAREVYGREPRRIHHYGAYNCRPVRTLRHLLSEHALGNAIDVVGFDFGAAT
                     KATPLPAALPKA"
     gene            complement(577..>2043)
                     /locus_tag="VLJ38_04015"
     CDS             complement(577..>2043)
                     /locus_tag="VLJ38_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU38703.1"
                     /translation="VILFLDEPTSGLAADDTTALITLLSDLTKQTGKTIVMTIHQPAK
                     DEFEKFNLALVLGTGGVTMFFGAPHDGYRFFGSLLERQGKPNNVDNPRDMFDMLNQRE
                     RPIFEAMRAQNPATGRQAARQQAAREWSAEFFNPQNPIFQKMYGGKRSVGTGTAQQGV
                     PGRASASGQFGLLFSRYFKVKVRDVSGTAIMLLQAPIIGVLLAGVFGGQKDAIPYWCL
                     GAMQELAQKSGNVGNGATDVLKSMAVTPDNAASMFFLVVSAVWFGTSNAAREIVSEVA
                     VYKRERMVNLRLFNYVFSKFLLLSLFCVIQCTLLLAIVFFALGYNGGMPAFGIELATM
                     ICTAMNSVAIGLLLSTVVSSSEAAMALTPIALIPQVVLGGLMVPMTTNPMLRIPMLLM
                     PARWGFQGVIAQEREAVANHAAWVLDLKKPDLTAPDNFVFQGKFHCAEAQLASLDFNG
                     AWGFTSYQQTWLPPVVLAVMMTVTLMVILVLLKRRDSV"
BASE COUNT          349 a          658 c          702 g          334 t
ORIGIN      
        1 gcgctttggg taaggcggcg ggcagcggcg tagccttcgt cgcggcgccg aaatcgaagc
       61 cgacgacgtc gatggcgttg ccgagcgcgt gttcgctcag gaggtgccgg agcgtgcgca
      121 cggggcggca gttgtacgcg ccgtagtggt ggatgcggcg gggctcgcgg ccgtacacct
      181 cgcgcgcgac ctcggcgacg accgtctcga agcgcgcgag ccgctcggcg aaggccgggt
      241 gcacgcagac ggccccggcg taacggatgg tcgtgccgcg ataagccacg atcgtgctct
      301 tgtcgcacgc gggccgttcg ccgtccggta accagcgcag gatatcgtcg agcgggtacg
      361 cgtcgtcgtg cgcggcgttc cagcgcgccc acgcttccgc gcgctcgcgc cccgcgtccg
      421 tctcggaaaa accgagcgcc gccgtcgcga gcaaggcgac gaccgcgaac tgtcgccggc
      481 cgcagcgcgg atggagcgag tctgagcgtc cggacatgtc gccgtcggca cagacacggc
      541 gcgccggccg cggcttgggt cgaccttccg ggggcgctac acggagtcgc ggcgcttcag
      601 gagcacgagg atcaccatca gcgtgaccgt catcatcacg gcgagcacga cgggcggcag
      661 ccacgtctgc tgataactcg tgaagcccca ggcaccgttg aaatccaggc tcgcgagctg
      721 cgcttccgcg cagtgaaatt tgccctggaa cacgaaattg tcgggcgccg tgaggtcggg
      781 tttcttgaga tcgagcaccc aggcggcgtg attggccacg gcctcgcgct cctgcgcgat
      841 gacgccctga aagccccagc gcgccggcat cagcaacatc gggatgcgca gcatcgggtt
      901 cgtcgtcatc ggcaccatca gcccgccgag cacgacctgc ggaatcaacg cgatcggcgt
      961 gagcgccatg gccgcctcgc tgctcgacac gaccgtgctc agcaggagcc cgatggcgac
     1021 cgaattcatc gcggtgcaga tcatggtcgc aagctcgatc ccgaacgccg gcatgccgcc
     1081 gttgtagccg agcgcgaaaa agacgatcgc gagcaggagc gtgcactgaa tcacgcaaaa
     1141 tagactcaag agcaagaact tggaaaagac gtagttgaac aagcgcaggt tcaccatgcg
     1201 ctcgcgcttg tagacggcga cctcgctcac gatctcgcgc gcggcgttgc tcgtgccgaa
     1261 ccacacggcc gagaccacga ggaagaacat cgaagcggcg ttgtccggcg tgacggccat
     1321 gctcttcagc acgtcggtcg cgccgttgcc gacgttgccg gacttttgcg cgagctcctg
     1381 catcgcgccg aggcaccagt acggaatggc gtccttttgg ccgccgaaca cgccggcgag
     1441 cagtacgccg atgatcggcg cttgcagcag catgatcgcc gtgccgctca cgtcacgcac
     1501 cttgaccttg aagtagcggc tgaacagcaa gccgaattgg ccgctcgccg aggcgcgccc
     1561 ggggacgcct tgttgcgccg tccccgtgcc gacggagcgc ttgccgccgt acatcttctg
     1621 gaagatggga ttttggggat tgaagaactc cgcgctccat tcgcgcgcgg cttgctggcg
     1681 tgccgcctgg cgtccagttg ccgggttctg cgcgcgcatg gcctcgaaaa tggggcgctc
     1741 gcgctgattg agcatgtcga acatgtcgcg cgggttatcg acgttgttcg gtttgccctg
     1801 ccgttcgagc agcgagccga agaagcgata accgtcgtgc ggcgcgccga agaacatcgt
     1861 gacgccgccc gtgccgagca cgagcgcgag gttgaacttc tcgaactcgt ccttggcggg
     1921 ctggtggatc gtcatgacga tcgtcttgcc cgtctgcttc gtcaggtccg agagcagcgt
     1981 gatgagcgcc gtggtgtcgt cggcggcgag gccgctggtg ggctcgtcga ggaagaggat
     2041 cac
//
LOCUS       DATIML010000231         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2355365, whole genome shotgun sequence.
ACCESSION   DATIML010000231 DATIML010000000
VERSION     DATIML010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2355365"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..1404)
                     /locus_tag="VLJ38_04020"
     CDS             complement(46..1404)
                     /locus_tag="VLJ38_04020"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU38704.1"
                     /translation="MRLDAASTTDTEAPASAAGDRSPGLSLVWVAPAVAPEPFPLQQK
                     RDEAQLIGRDESCALCLPGTDVSRRHASLHFGTDGELTLVDLDSRNGTHVNGARIRTK
                     RLGPGDVVRIGGWVGVVSDAPEGSAELAPGLYGGGVLRRAIAPLAQAAPSDLPIVLEG
                     ETGTGKEVVARAVHTWSGRSGPFIAVNCAALPEALAEAELFGYRRGAFTGAERAGTGF
                     LRAADGGTLLLDEIQDLGLPLQAKLLRALEQSEVQPLGEAHPVPVDLRVVVAGQESLL
                     GAVRERRFRADLLARLDGLSVRLPPLRARREDIPALFTRLWTTLGGGPAPTLEYDFVE
                     RLCVHDWPLNVRELVLLVRRLRVFCADAKSLRARALPPRIGEAVERAGSTHPPADVPV
                     PDKRSEATDPPEPIELPELIAALRASQGNVARASALLGITRQRAYRLIEGHALDLDEI
                     RG"
     gene            1548..>2212
                     /locus_tag="VLJ38_04025"
     CDS             1548..>2212
                     /locus_tag="VLJ38_04025"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38705.1"
                     /translation="MSEEAEMLAAASQRVGSVLHGKYHLDGVLGVGGMATVYAATHRN
                     RKRFAVKILHPEFSVKRDIRTRFVREGYAANSVEHPGVVAVIDDDVDETGAAFLVMEL
                     LTGVTVDALYATGAPVPLREALGITHQLLDVLEAAHRKSIVHRDIKPANLFLVRDGQL
                     KVLDFGIARLRETDASLRSTRTGATLGTPAFMAPEQARALPLEVDARTDIWAAGATLF
                     TMLS"
BASE COUNT          358 a          746 c          764 g          344 t
ORIGIN      
        1 cggcattgac ccgaggagta atccgggatc tccgcagcct gccggctacc ctctgatttc
       61 gtcgaggtcc aaggcgtgcc cctcgatcaa gcgataggcg cgctggcggg tgattccgag
      121 tagcgccgac gcgcgcgcca cattgccttg agacgcccgc agcgcggcaa tgagctcggg
      181 gagctcgatc ggctccgggg gatccgtcgc ttcgctgcgc ttgtcgggga ccggcacgtc
      241 cgctggcgga tgcgtcgacc ctgcgcgctc gaccgcttcg ccgatgcggg gagggagggc
      301 tcgcgcgcgt aggctcttcg cgtctgcgca gaagacgcga aggcggcgca cgaggagcac
      361 gagctcgcgc acgttgagcg gccagtcgtg gacacagaga cgttcgacga agtcgtattc
      421 gagagtcgga gccggaccgc cgccgagggt cgtccacagt cgggtgaaca aggccggaat
      481 gtcttcacgc cgcgcgcgga ggggcgggag tcgcacgctg aggccgtcga gacgagcgag
      541 caaatcagcg cgaaaacgcc gttcgcggac ggctccgagc agcgattcct ggcccgcgac
      601 gacgacgcgc aggtccaccg gaaccggatg cgcttcaccg agcggctgca cctcgctctg
      661 ctcgagcgcg cggagcagct tggcctggag cggcaacccg agatcttgaa tttcgtcgag
      721 caggagcgtc ccgccgtcgg ccgcgcggag aaaacccgtg ccggcgcgct ccgcccccgt
      781 gaacgcgccg cgccgataac cgaagagctc ggcctcggcc agcgcttcgg gcagcgccgc
      841 acaattcacg gcgatgaacg gtccggaacg accgctccac gtatgaacgg cacgggcgac
      901 gacctctttg ccggttccag tctcaccttc gagcacgatc ggtaagtcgc tcggcgctgc
      961 ctgagcgagc ggagcgatgg cgcgccggag cacgccgccg ccgtagagac ccggtgcgag
     1021 ctccgcgctg ccttccggtg cgtcgctcac gacgcccacc catccgccaa tccgcacgac
     1081 gtcgccggga ccgagccgct tggtgcggat ccgggcgccg ttcacgtgcg tgccgttgcg
     1141 gctgtcgaga tccacgagcg tgagctcgcc gtcagtgcca aagtgcaagc tggcgtgccg
     1201 gcgcgacacg tcggtgccgg gcaggcagag cgcgcaggat tcgtcgcgcc cgatcagctg
     1261 cgcctcgtca cgcttctgct ggagcggaaa aggttccggc gcgaccgcgg gcgcgaccca
     1321 cacgagcgag agcccgggcg agcggtcgcc ggcggcggaa gcgggcgctt ccgtatcggt
     1381 cgtactcgct gcgtcgagcc gcatgttccg aattctacgc gagtcttgcg ttctcgcggt
     1441 cagcgcgcgt tgtcccgcgg cagtgttacg gggacgccgc agccggcgcc gcatgactaa
     1501 tcgctattca ccggcccagg gttcgggtgt agacaaaact actacccatg tcggaagagg
     1561 cggaaatgct ggcggctgcg tcgcagcgcg tgggcagcgt gcttcacggc aagtatcacc
     1621 tcgacggggt gctcggcgtc ggcggcatgg ccaccgtcta cgcggcgacg caccgtaatc
     1681 gcaagcgctt cgccgtgaag atactgcacc ccgagttctc cgtaaaacga gacattcgga
     1741 cgcggttcgt tcgcgagggg tacgccgcca attcggtcga gcaccctggc gtcgttgcgg
     1801 tcatcgacga cgatgtggac gagaccgggg cggctttcct cgtcatggag ctgctcaccg
     1861 gtgtcacggt cgacgcgctc tacgcgaccg gtgcgccggt cccgctgcgc gaggcgctcg
     1921 gcatcacgca ccagctgctc gacgtgctcg aggccgctca tcgaaaatcg atcgtccatc
     1981 gcgacatcaa gcccgccaat ctgttcctcg tgagggacgg ccagctgaag gtgttggatt
     2041 tcggcatcgc tcgcttgcgt gaaaccgacg cgagcctgag atcgacgcgc accggcgcga
     2101 cgctcggcac gcccgcgttc atggcgcccg agcaagcgcg agctttgccg ctggaggtcg
     2161 atgcacgcac cgacatctgg gctgccggcg ccacgctgtt cacgatgctc tc
//
LOCUS       DATIML010000232         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1490262, whole genome shotgun sequence.
ACCESSION   DATIML010000232 DATIML010000000
VERSION     DATIML010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490262"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1139
                     /locus_tag="VLJ38_04030"
     CDS             <1..1139
                     /locus_tag="VLJ38_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thrombospondin type 3 repeat-containing protein"
                     /protein_id="HSU38706.1"
                     /translation="FDDFEDEDGCPEPDNDKDGILDDVDKCPNEPETKNGYQDEDGCP
                     DSTTFDRDGDRIPDDVDKCPDDPEDKDGFQDKDGCPDPDNDQDGILDAEDACPLEAGV
                     KDQDPKLTGCPFRDQDGDGIVDARDRCPRRAEDRDGFQDDDGCPDPDNDRDGVRDEED
                     ACPNVPGARRSDPALNGCPSPDKDGDTFDDAIDQCPDAAETFDGVNDDDGCPDAPDDG
                     KVRPALVSIAPTRGAGRPRFLVKLKDAVLFAPDGALAPKSEATLRALSSLLNAEPELV
                     LMVAVRPARPKPEAEHAAVTRAFTLVEALRSYTHRDEVAEVIHWQSLQKLPGATLPSG
                     LGFLVLAPVPPPLTPAPTVAEPGVAPQGTVTAPASSPKKLKEPR"
     gene            1136..>2273
                     /locus_tag="VLJ38_04035"
     CDS             1136..>2273
                     /locus_tag="VLJ38_04035"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU38707.1"
                     /translation="MKPLAAWTLVACLVAANASAQSRGTAPKPTERGSLRSRFGVDAV
                     RSLLRSEASADRERAFERLGTLGTPRALELLARALDTDGAARDAHERLTVVRALAVHA
                     GDPTAADALIRALGGVEGHDDERALLVESTAALALAASHDPRALTALARALRRPGRVS
                     EHARLALSANPPADTSVLLQAGGMATPALARLLGELGDVRALEPVEKLTLDADPAVRA
                     AAAGALFRLAPERAVTLAERSFTSEPDPNVRGELARVLAERSSPFAPRAFANVLADAR
                     SRPSALALALDVQNAGFGAALARTPPGDDPDRLFAALGHQGGKEALARLESALAKPTD
                     AWSALYALASSPDPGADDVLARALARPALRRDAARAATLRSLLHE"
BASE COUNT          361 a          878 c          757 g          277 t
ORIGIN      
        1 acttcgacga cttcgaggac gaggacggct gtcccgaacc cgacaacgac aaggacggca
       61 tcctcgacga cgtcgacaag tgcccgaacg agcccgagac gaagaacggc taccaggacg
      121 aggacggctg ccccgactcg accacgttcg atcgcgacgg cgaccgcatc cccgacgacg
      181 tcgacaagtg cccggacgat cccgaggaca aggacggctt ccaggacaag gacggctgcc
      241 ccgaccccga caacgatcag gacggcatcc tcgacgccga ggacgcttgc ccactcgaag
      301 ccggcgtgaa agaccaagat ccgaagctca ccggctgccc gttccgcgat caggacggcg
      361 acggcatcgt cgacgcgcgc gatcgctgcc cgcggcgcgc cgaggaccgc gacggcttcc
      421 aagacgacga cggctgcccc gacccggaca acgatcgcga cggcgtgcgc gacgaagaag
      481 acgcctgccc caacgtgccg ggcgcgcggc gctccgaccc agcgctcaac ggctgcccga
      541 gccccgacaa agacggcgac accttcgacg acgccatcga ccagtgcccg gacgccgcgg
      601 aaaccttcga cggcgtgaac gacgacgacg gctgcccgga tgcgcccgac gacggcaagg
      661 tgcggccagc gctcgtctcg atcgcgccga cgcgcggggc gggcaggccg cgcttcctgg
      721 tcaagctgaa ggacgccgtg ctgttcgcgc cggacggcgc gctcgcgccg aaatccgaag
      781 ccacgctgcg cgccctgtcg agcctgctca acgccgagcc cgagctcgtg ttgatggtgg
      841 ccgtccggcc tgcgcgcccc aagcccgagg ccgagcacgc ggcggtcacg cgtgcgttca
      901 cgctcgtgga agccttacgt tcctacacgc accgtgacga agtggcggag gtgattcatt
      961 ggcaatcgct ccaaaagctg cccggggcga cactaccgtc cgggcttgga tttttggtgc
     1021 tcgcaccggt tccgcccccg ctcacaccgg cgcccacggt tgcagagccc ggggtcgccc
     1081 cgcagggaac cgttacggct cccgcctcat caccgaaaaa actcaaggag ccgcgatgaa
     1141 gcccctcgcc gcgtggacgc tcgttgcgtg tctagtcgcg gcgaacgcga gcgcgcaatc
     1201 acggggcacc gctccgaaac cgaccgaacg aggctcgttg cgcagtcgct tcggcgtgga
     1261 cgccgtgcgt tccctcttgc gcagcgaagc gagcgccgat cgcgaacgcg ccttcgagcg
     1321 gctcggcacg ctcggcacgc cgcgtgcgct cgagctcctc gcgcgcgcgc tcgacaccga
     1381 cggcgcggcc cgcgacgcac acgagcggct cacggtcgtg cgcgcgctcg cggtgcacgc
     1441 gggcgatccc acggcggcag acgcgctcat ccgcgccttg ggcggcgtcg aagggcacga
     1501 cgacgagcgg gcgttgctcg tcgaaagcac cgctgcgctc gcgctcgcgg cctcacacga
     1561 cccgcgcgcg ctgaccgctc tcgcccgcgc cctgcgacgg cccggtcgcg tctccgagca
     1621 cgcccggctc gcgctcagcg ccaatcctcc cgccgacacg agcgtgctgc tccaggcagg
     1681 cggcatggcg acgcccgcgc tcgcccgttt gctcggcgag ctcggcgacg tccgggcact
     1741 cgaacccgtc gaaaagctca cgctcgacgc cgatcccgcc gtgcgagcgg ccgccgcggg
     1801 cgcgctcttt cgccttgcgc ccgagcgcgc cgtcacgctc gcggagcgct ccttcacgag
     1861 cgaaccggat ccgaacgtac gcggcgagct cgcgcgcgtg ctcgccgaac ggagctcgcc
     1921 gttcgcgcct cgcgcttttg ccaatgtctt ggccgacgcg cgctcgcgcc cgagcgccct
     1981 cgcgctggcg ctcgacgtgc aaaacgcggg cttcggagcg gcgctcgcgc gcacgccacc
     2041 cggcgacgac ccggatcgtc tgttcgccgc gctcggccat cagggcggca aagaagcgct
     2101 cgcgcgcctc gaaagcgcgc tcgcgaagcc gacggacgcc tggtccgcgc tctacgcgct
     2161 cgcctcgagc ccggatcccg gcgccgatga cgtgctcgcg cgcgccctcg cgcgaccggc
     2221 gctgcgccga gacgcggcgc gtgcggcgac gctacgcagc ctattgcacg agc
//
LOCUS       DATIML010000233         3007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_47363, whole genome shotgun sequence.
ACCESSION   DATIML010000233 DATIML010000000
VERSION     DATIML010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47363"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VLJ38_04040"
     CDS             complement(<1..423)
                     /locus_tag="VLJ38_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38708.1"
                     /translation="MTGRVLLALAALAAGCAAGRQIVTPRAEYRLYRETRLAPTVEAR
                     LGAANRYLHVSPNGAYAPELRAWFGNAERAYVASAHDKLPLLLAYAKALPDGPSIGTV
                     NERIEELEAATRFLQERARAHEQRVESLETALARAATQR"
     gene            complement(420..809)
                     /locus_tag="VLJ38_04045"
     CDS             complement(420..809)
                     /locus_tag="VLJ38_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38709.1"
                     /translation="MSSLRRSTAFRLGAVFALAALSLAPTPGDVGGCGQHAQTLDPVT
                     FFELKRERDCQKCTECEFSSNYCTDVCSPDYEAPTLPEGCVPLVHDGEVCLDALEAAG
                     CGEYRDYTTDQGRVLPSECQFCPEPSP"
     gene            complement(806..1438)
                     /locus_tag="VLJ38_04050"
     CDS             complement(806..1438)
                     /locus_tag="VLJ38_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38710.1"
                     /translation="MPAVHARLGGVLFAALAVTLGAPQAKADDGEDFSRLDLSHVPAR
                     TPAAAGGPYVHTFGELAFGKGVHTNNPYRLGSSDAFGFTATYFDLSLGVAFGPADGFQ
                     HGLQLSLLTATDGIAQQVLGIDYAALYPLGEHAIFRARAGVPIVLAPDATMGLEAAAG
                     GAWLFLGGVGVSAELVGSFFYGAATPDRAKTAIPVFALQLGAWFDYEVLP"
     gene            complement(1443..2744)
                     /locus_tag="VLJ38_04055"
     CDS             complement(1443..2744)
                     /locus_tag="VLJ38_04055"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HSU38711.1"
                     /translation="MSIDFQRRRKRVLEAMGDAALVVFAAPYLIRNNDVEHEWRQESD
                     FHYLSGFDEPESVLVLRGGAEPRFVLFVRPRDPEREAWDGPRAGVEGAVAEYGADAAF
                     PLEELGKELPALLANVADLHYALGRARANDDIVLQALDAVRRLARRGTASAPRAIADP
                     SSVLHEERLIKAPEEIARMEQALAITAEGHRAVMAASQPGMFEYEAEAILRGVFRRQG
                     SERQAYPPIVGSGPNSTVLHYRKNDRRMLDGDLLLVDAGSEYDYYASDVTRTFPVNGS
                     FTPAQRQTYELVLAAELAAIAAVRPGATLEGVHLAAARVLTEGLLELGLVEGPLEEAI
                     EAKRYKPWFMHGTSHWLGMDVHDVGAYYVERKARPLAPGMVLTVEPGLYFTATDERVR
                     PEFRAIGIRIEDDVLVTETGARVLSEAIPKAIDSVEQACRG"
     gene            2823..>3007
                     /locus_tag="VLJ38_04060"
     CDS             2823..>3007
                     /locus_tag="VLJ38_04060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38712.1"
                     /translation="MASEPAGGPDVPPESEVDRRKLERIIPDIIKRVLEAGLERLSEG
                     PDSVRRVMGDLRLPREAL"
BASE COUNT          488 a         1017 c         1048 g          454 t
ORIGIN      
        1 cctttgcgtg gcagcgcgcg cgagcgcggt ttcgagcgac tcgacgcgct gctcgtgcgc
       61 gcgcgctcgc tcttgcagga agcgcgtggc ggcttcgagc tcttcgatac gctcgttcac
      121 cgtgccgatg ctcggtccgt cgggcaaagc cttggcgtac gcgagcaaga gcggcagctt
      181 gtcgtgagcg cttgcgacgt acgcgcgctc ggcgttgccg aaccaggcgc gcagctcggg
      241 ggcgtaggcg ccgttcggcg agacgtgcag gtaacggttg gcggcgccga ggcgcgcttc
      301 gacggtgggc gcgagccgag tctcgcgata gagccggtac tccgcgcggg gcgtgacgat
      361 ttgccggccg gcggcgcagc cggcggcgag cgctgcgagc gccaagagca cgcgacctgt
      421 cacggggatg gctccgggca aaactggcat tccgacggca agacgcgacc ttggtccgtc
      481 gtgtagtcgc gatactcacc gcagcccgca gcttcgagtg cgtcgagaca cacctcgccg
      541 tcatggacga gcggcacgca gccttccggc agcgtcggcg cttcgtagtc cggcgagcac
      601 acgtcggtac agtagttcga cgagaactcg cactcggtgc acttctggca gtcgcgctca
      661 cgcttgagct cgaagaacgt cacggggtcg agcgtctggg cgtgctggcc gcagccgccg
      721 acgtcacctg gcgtcggcgc gagcgagagc gccgcgagcg cgaacacggc gccgagccgg
      781 aacgcagtac ttcgcctgag cgagctcatg ggagcacctc gtaatcgaac cacgcgccga
      841 gctggagcgc gaacacgggg atcgccgttt tggcgcggtc gggcgtggcg gcgccgtaaa
      901 agaagctgcc cacgagctcg gcgctcacgc cgacgccacc caaaaacagc catgcgccac
      961 cggcagcagc ctcgagaccc atcgtggcgt cgggagcgag cacgatgggc acccctgccc
     1021 gcgcgcgaaa gatggcgtgt tcgccaagcg ggtagagtgc cgcgtaatca atccccagca
     1081 cctgctgcgc gatgccgtcc gtggccgtga gcagtgacag ctgcagcccg tgctggaatc
     1141 catccgctgg cccgaatgcc acccccaaac tcagatcgaa gtaggtcgcc gtgaaaccga
     1201 acgcatcgga tgaccccaag cgataaggat tgttcgtgtg cacgcctttg ccgaacgcga
     1261 gctcgccgaa cgtgtgcacg taagggcccc ccgccgctgc cggcgtccga gccggcacgt
     1321 gcgacagatc gaggcgcgaa aaatcctcgc catcatcggc cttcgcctgc ggtgcgccga
     1381 gtgtgacggc tagcgccgcg aagaggacgc cgccgagcct cgcatggacc gccggcaacg
     1441 gactaacctc tacacgcctg ctcgacggaa tcgatcgctt tgggaatcgc ctcggaaagc
     1501 acgcgcgcgc ccgtctccgt cacgagcacg tcatcctcga tgcggatacc gatggcgcga
     1561 aattcggggc gcacgcgctc atcggtcgcg gtgaaataga gccccggctc gacggtgagc
     1621 accatgcctg gcgcgagcgg gcgcgctttg cgctcgacgt agtaggcgcc cacgtcgtgc
     1681 acgtccatgc cgagccagtg gctcgtgccg tgcatgaacc acggtttgta gcgcttggct
     1741 tcgatcgcct cctcgagcgg gccttcgacg agcccgagct ccagcagccc ttcggtgagg
     1801 acgcgagccg cggccagatg cacgccctcg agcgtcgcgc ccggacgcac ggccgcgatg
     1861 gcggcgagct cggctgcgag cacgagctca taggtctgcc gttgcgccgg cgtgaagctg
     1921 ccgttcaccg ggaaggtccg cgtgacgtcg ctcgcatagt agtcgtattc ggacccggca
     1981 tcgacgagga gcaagtcgcc gtcgagcatg cgacggtcgt tcttgcggta gtggaggacg
     2041 gtgctgttcg gccccgaacc gacaatcggc ggatacgctt gacgctccga gccttgccgg
     2101 cggaacacgc cgcgcaggat cgcttcggcc tcgtactcga acatgcccgg ttgggacgcc
     2161 gccatcacgg cgcgatgacc ttcggccgta atcgcgagcg cctgctccat ccgggcgatc
     2221 tcctcgggcg ctttgatgag ccgctcctcg tggagcacgc tcgaggggtc ggcgatcgcg
     2281 cgcggggcgc tcgccgtgcc gcgccgagcg agccttcgca ccgcgtcgag cgcctgcagc
     2341 acgatgtcgt cgttcgcgcg cgcgcgaccg agcgcgtaat ggaggtcggc aacgttggcg
     2401 agcagcgccg gcagctcctt gccgagctcc tcgagcggga acgcggcgtc cgctccgtac
     2461 tccgcgacgg cgccttcgac cccggcacga gggccgtccc aggcctcgcg ctcgggatcg
     2521 cgcggccgca cgaagagcac gaagcgtggc tcggcgccgc cgcgcaagac gagcacgctc
     2581 tcgggttcgt cgaaccccga gaggtagtga aagtccgact cctggcgcca ctcgtgctcc
     2641 acgtcgttgt tgcggatgag gtacggggca gcgaacacga cgagcgcggc gtcgcccatg
     2701 gcttcgagaa cgcgcttgcg ccggcgctgg aagtcgatgg acatcggccc aaagtgttac
     2761 acggcggctc gatgcgcaca gccgcatttg acgagcggag cgcctagcgg tacgcgttgc
     2821 gcgtggcgag tgagcctgct ggcgggccgg acgtcccccc cgaatccgag gtcgaccggc
     2881 gcaagctcga gcgcatcatc ccggacatca tcaagcgtgt tctcgaagcc ggtctcgagc
     2941 gcttgagcga ggggcccgac agcgtgcggc gcgtgatggg cgacttgcgt ctgccgcgcg
     3001 aagcgct
//
LOCUS       DATIML010000234         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4669312, whole genome shotgun sequence.
ACCESSION   DATIML010000234 DATIML010000000
VERSION     DATIML010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4669312"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1578)
                     /locus_tag="VLJ38_04065"
     CDS             complement(<1..1578)
                     /locus_tag="VLJ38_04065"
                     /inference="COORDINATES: protein motif:HMM:NF011071.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming)/trehalose-phosphatase"
                     /protein_id="HSU38713.1"
                     /translation="MVVEVGEASGQRGRVLLVSNRLPVSITPNSEPLLVRPSPGGLAT
                     GLRSVHASGSSAWIGWPGVNTEPGPERERIERALPSNVVPVHFTSEEMTRFYDGIANG
                     VIWPLFHYLLDRVPGDIRDWDAYESANQRFADAVAKEARPDDLIWVQDYHLLLLPALL
                     RDRLPRARIGFFLHIPFPSSEVFRILPYREAVLQGLLGADLIGFHTFNDQRHFSAALL
                     SVLGFDAELDRVEVEGRSVRLHVFPMGVDADGFSALAREPAILKASRELRAAHAAEKL
                     LLGIDRLDYTKGLTRKFLAIERLLERSPQYRSKIMLLQVAVPSRENVSAYRELKREIE
                     EIAGRINGAHATLHSAPIHYVYDSVDQNELVASYLAADVMLVTPLRDGMNLVAKEYVA
                     SRVDGDGVLVLSEFAGAASELADALVVNPYDVAAIAGALERALEMDEPERRRRMRRLR
                     EKVDARPVDLWASSFLSALRLEPTSLGPADLRRRPEQVLALADEIAERPELVFALDYD
                     GTLVPISSTPDGAVPGAE"
     gene            complement(1568..>2035)
                     /locus_tag="VLJ38_04070"
     CDS             complement(1568..>2035)
                     /locus_tag="VLJ38_04070"
                     /inference="COORDINATES: protein motif:HMM:NF023367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3459 domain-containing protein"
                     /protein_id="HSU38714.1"
                     /translation="TGRRKEFEHFAAFADPSARERIPDPQAAATFEQSRLRWDERHEG
                     EHATTLAVFRAALALRQSDPVLREPSNGRLEAVADGNVVVVRRWVERSERVVLVNFGD
                     EPRPLADFRAYSALGEARCLLASTPSLPQGKLAAWSAAVFGGEAPQENRSDGG"
BASE COUNT          336 a          682 c          695 g          322 t
ORIGIN      
        1 ctccgcgccg ggaaccgcgc cgtccggcgt cgagctgatc ggcacgagcg tgccgtcgta
       61 gtcgagcgcg aacacgagtt cgggccgctc ggcgatttcg tcggcgagcg ccagcacctg
      121 ttcggggcgg cggcgcaggt cggcggggcc gaggctcgtg ggttcgagcc taagcgccga
      181 caaaaatgag ctcgcccaca gatcgacggg ccgcgcgtcg accttttcac gcagccgccg
      241 catacggcgc cgccgctcgg gctcgtccat ttcgagcgcg cgctcgaggg cgccggcgat
      301 ggcagcgacg tcgtagggat tgacgacgag cgcgtcggcg agctcgctcg ccgcaccggc
      361 gaattcgctc aagacgagca cgccgtcgcc gtcgacgcgc gaggcgacgt actctttcgc
      421 gaccagattc atgccgtcac ggagcggcgt cacgagcatc acgtctgcgg ccaagtagct
      481 tgccaccagc tcgttctggt cgaccgaatc gtagacgtag tggatgggcg cgctgtgcag
      541 cgtcgcgtgc gcgccgttga tgcgacctgc gatctcttcg atctcgcgct tgagctcgcg
      601 gtaggcgctg acattttcgc gcgacggcac ggccacctgg agcagcatga ttttactgcg
      661 atattgtggc gagcgctcga gcaggcgctc gatggcgagg aatttgcgcg tgaggccctt
      721 ggtgtaatcg agccgatcga tgccgagcag gagcttctcg gcggcgtgcg ccgcgcggag
      781 ctcccgactc gccttgagga tcgcgggctc gcgggcgagc gcgctgaacc cgtcggcgtc
      841 gacgcccatg ggaaaaacat gcagacgcac gctgcgccct tcgacctcga cgcgatcgag
      901 ctcggcgtcg aagccgagca cgctgaggag cgcggcggag aagtgacgct gatcgttgaa
      961 cgtgtgaaac ccgatcagat cggcgcccaa gaggccctgg agcacggcct cgcggtacgg
     1021 taaaatgcga aagacctccg acgaggggaa ggggatgtgc aaaaagaaac cgatgcgcgc
     1081 gcgcggcagc cgatcgcgga ggagcgcggg caagagcaag aggtgatagt cctgcaccca
     1141 gatcagatcg tcggggcgcg cctctttcgc gaccgcgtcg gcgaagcgct gattcgcgct
     1201 ttcgtacgcg tcccagtcgc ggatgtctcc gggcacgcgg tcgagcaaat agtgaaagag
     1261 cggccaaatg acgccgttcg cgatgccgtc gtaaaagcga gtcatctcct cgctcgtgaa
     1321 gtgcaccggc acgacgttcg agggcagcgc gcgctcgatg cgctcgcgtt ccggcccggg
     1381 ctccgtgttc acgccaggcc agccgatcca cgcgctcgag ccgctcgcgt ggacgctacg
     1441 gagtccggtc gcgagccccc cggggctcgg tcgcacgagg agcggctccg aattgggagt
     1501 gatcgagacc ggcagccggt tcgagaccaa aagcacacgt ccgcgttgac cgctcgcttc
     1561 gcctacttca accaccatcg ctcctgttct cttggggggc ttcgccgccg aacaccgcag
     1621 ccgaccacgc cgcgagcttt ccctgcggca gactcggcgt gctcgcgagc aggcaacgtg
     1681 cctctccgag cgccgagtat gctctgaaat cggcgagcgg tcgtggctcg tcgccgaaat
     1741 tcacgagcac gacgcgctcg cttcgttcga cccagcgccg cacgacgacg acgttgccgt
     1801 ccgccacggc ttcgagccgc ccgttgctcg gctcgcgcaa caccggatca ctctgccgca
     1861 gggcgagcgc cgcgcgaaat acggcgagtg tcgtcgcgtg ttcgccctcg tgccgctcgt
     1921 cccaacgcag ccgcgattgc tcgaacgtcg cagcggcctg cgggtcgggg atccgctcgc
     1981 gcgcgctcgg atcggcgaac gccgcgaagt gctcgaactc cttgcgtcgc cccgt
//
LOCUS       DATIML010000235         7252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3800857, whole genome shotgun sequence.
ACCESSION   DATIML010000235 DATIML010000000
VERSION     DATIML010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7252
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3800857"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1328)
                     /locus_tag="VLJ38_04075"
     CDS             complement(<1..1328)
                     /locus_tag="VLJ38_04075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38715.1"
                     /translation="MTYGATRALVAVTLAAAAFGCGEGHDIDLGAVLTTVPLAPPVDS
                     CGDKPCANYSGDQTFVEPSASDTLPDAFDAALDQPPGPDATFELVLTYPSDETRLPVN
                     FSQVRFAWSLRAPGAAASSASAPADTRFAVDFVGTRTSVRILTAETHWLATADEWAWI
                     AESNRGGRVDVTVRALDSEQMRVWRSRTVALFVSPSALEGTVYYWSTGSRGLMQALAT
                     GTRAARVFTDPSGPDSATCTGCHAVSRDGKRLAAIYDKNQIAELDLRDGSVIVPLGSA
                     GVMTTPPRAPDPMAMPMPDAGPAAPTMPAPKDDKAPSVAWTTFSPDGKRLLLAGGGQL
                     HLIDANSGVPVGADSGAVHLSAAMLATHPDWSPLGDRVAVTLASKGGDKQTEGGSIAL
                     IPFHDDTFGDPEVLVKASDKDKDNNFFPSFSPDGRFIAYVNAPGGSQEASS"
     gene            complement(1325..2275)
                     /locus_tag="VLJ38_04080"
     CDS             complement(1325..2275)
                     /locus_tag="VLJ38_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38716.1"
                     /translation="MSKDPTRLSEGTDELASSIAGLRTESPSDARLAAIAARLASAGV
                     PIGDGDAPASTRVPKRARLTLARLKRVIDSGVLAVVLALVVGAGVVTAALFVRSADEM
                     TPSPRPEGAVPSVATATAQDARALPSAPPPATTQSGHSLDADADHDRTTRPTAPGVAD
                     TAPSGVATTPNGVATPPSTPPTTATQPSAVARQVGVPATSSAPSSRASTSHVLPAAPS
                     TATGAPLAAGAPVLSEVELLKQARSALAADPLQAFALTEQCRSRYPDGSFVQEREYIA
                     IVALARLGRVEEARSRASLFRMHYKNSAYLPRLGTLLGEP"
     gene            complement(2272..2850)
                     /locus_tag="VLJ38_04085"
     CDS             complement(2272..2850)
                     /locus_tag="VLJ38_04085"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU38717.1"
                     /translation="MTQPDQKDPEALPLIEVNAGPANVTQPGSALSFAEVFREHARPL
                     WRALLGLGVRPGDVDDACQEVFLVVHRRLPEFDGRALRSWLYAICLRVASEYRRSARV
                     RREITVDEVPEDEAAPMQLDVVATRELSARLLASLGRLDEEKRQAFVLYEVEELTLRE
                     VAEALGCPLQTAYSRLQAARTFVRNDFERNAP"
     gene            complement(2847..3866)
                     /locus_tag="VLJ38_04090"
     CDS             complement(2847..3866)
                     /locus_tag="VLJ38_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38718.1"
                     /translation="MSGRRRRSVARTWLASLLACSSFALGGRVQAQSGTAPSTVALSW
                     TGPGPELTCLGEEGLARAVDDYVGRDAFAAGPVEAALHVSVERLPDRHWHALLELTDR
                     TGDVLGTRELTSTTELCSSLDEPLVLTVALMVDDEASPVVAPPPPPETPAPEPPPAPV
                     ERPSHGERMHWLADGALAFESGLEPKFAPGLSLGVELRAAPWFSARAGVLAFLPAEAA
                     VTGGSSVHFTFLAGTLELCTGVGTTRSVRGALCVGPVYGALSAKPHGLNKTQRTSSEV
                     LALSTGLRGAVPLAGHWAATVGVSALFPHRPDRFVVEVEGARHEVFRLSAPSVVATAG
                     VAFLF"
     gene            complement(3885..4547)
                     /locus_tag="VLJ38_04095"
     CDS             complement(3885..4547)
                     /locus_tag="VLJ38_04095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38719.1"
                     /translation="MRSAAFLARRPPSGWIWTLGVFLCGAVVACGSTDPATPAPSSHS
                     TGGSPGGAGGARAGGDNPGGRSVGASGTGTSAGARATGSGGATAGSTNGAAGTRLGSA
                     TAGHASSTPPAPGPDGSSPYERECHGDSLDCGDVPALLCLGIRDDTTVYGYGCSNPCQ
                     NDADCTSAPSSAEASAACVDFVTQKHCLLVCLDGTKRSTCPAGMSCYVYPQTTVGYCL
                     WQ"
     gene            4688..5854
                     /locus_tag="VLJ38_04100"
     CDS             4688..5854
                     /locus_tag="VLJ38_04100"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HSU38720.1"
                     /translation="MNKLLVVTAIFVTTGALSGCSSDAAGDRALPRARGTGSAGGTSI
                     VVDVSSQGSGTPNSGDGSSSGVGQCGAASFNGCVGNDFEGESVPLDIYVMFDTSGSML
                     NDVGGVTRLQAIQAAATAFLRDPASRGIGVGIGYFGTQPIGSTSCDPAVYAQPDVPVS
                     TDHEAVIASLAARMPTGETPTAAALRGACSYARDEKTAHPERALVILLMTDGKPEAPV
                     SCAAGGCCPTLDDAVKATADCASGSRGIVTYVLGVGPELDNLDQIAAAGKTRSAYLVG
                     DQDVTANVLAALNSIRGDAAIPCELSIPKPTDGSTLDYSRVNLVYSTSGCDFAPAYYV
                     DSAASCDTAGGWYYDDPNAPSAVELCPATCDDVSIPGARLQFSVGCATLPKPPR"
     gene            5903..7120
                     /locus_tag="VLJ38_04105"
     CDS             5903..7120
                     /locus_tag="VLJ38_04105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38721.1"
                     /translation="MNVRKSSVIGAVGLALASYACGGESNSGANGSTQGSGASASGPS
                     GHGAGGSSASGSGNGATSGGPTFQGAGTDYLPLTPGCGPATASECTGTCEAHATFDPS
                     AVIRAPATLCFTGDADPTPDDPLATIEQVLEVIGGKRVIHLRITFDPAFVDNTYGQNA
                     SSGWSGTDTGTDAGAAPAPGAQPGMMPGMKPGMKPGRHGHTFSDLVGSDHVELLLTDG
                     AGKTVMDFDVDYITAASGTCGYRTLGVTGGEGKIVSGNASAVLGAATSLDRDLNGCGY
                     CYTTDSPATDDNYTPNAATPAWDYRVVYEVWLDLDAFGSSGFGQAYINNVHASPSKLS
                     SDTVTVTPTSCPNDWDTPHGGTCPQNYTVYVQSEGKSSCVPIPFANYPNMAPCPSGYT
                     LDLATEGKYCIPE"
BASE COUNT         1158 a         2418 c         2550 g         1126 t
ORIGIN      
        1 gagctggctt cttgcgagcc gcctggcgca ttcacgtacg cgatgaagcg gccgtcgggg
       61 ctgaagctcg ggaagaagtt gttgtccttg tccttgtcgc tcgctttaac gaggacttcg
      121 gggtcgccga aggtgtcgtc gtggaaggga atgagcgcga tcgagccgcc ctcggtttgt
      181 ttgtcgccgc ccttgctagc gagtgtgacg gcgacgcgat cgccgagcgg cgaccagtcg
      241 ggatgggtcg cgagcatggc tgccgacagg tgtacggcgc ccgagtcggc gccgacgggg
      301 accccgctgt tggcatcgat gaggtgcagt tggccgccgc cggcgagcag caagcgtttt
      361 ccgtcgggtg agaaggtagt ccacgcgaca gacggtgctt tgtcatcttt gggcgcgggc
      421 atcgttggcg cagccgggcc ggcgtcaggc atcggcatgg ccatgggatc gggtgcgcgt
      481 ggcggcgtgg tcatgacacc cgcgctgccg agcggcacga tgacggagcc gtcgcggagg
      541 tcgagctcgg cgatttgatt tttgtcgtaa atggcggcca ggcgtttgcc gtcgcgcgac
      601 acggcatgac agccggtgca cgttgcggag tcggggccgg acggatcagt gaagacgcgc
      661 gcggcacgcg tgcccgtcgc gagcgcctgc atcagcccgc ggctgccggt agaccaatag
      721 tagacggtgc cttcgagagc cgagggactc acgaagagcg ccacagtacg tgagcgccac
      781 acgcgcattt gttccgaatc gagcgcccgc accgtcacgt cgacgcgccc gccgcggttc
      841 gattcggcga tccatgccca ttcgtcagcg gttgccagcc aatgcgtctc ggccgtcagg
      901 atgcgcacgc tcgtgcgcgt ccccacgaag tcgacggcga agcgcgtgtc ggccggggcg
      961 ctcgccgaac tcgccgccgc accgggcgca cgcaagctcc atgcgaagcg cacctgggag
     1021 aaattgacgg gcaaccgcgt ttcgtcgctc gggtacgtga ggacgagttc gaaggtcgcg
     1081 tcggggccgg gcggttgatc cagcgcggcg tcgaaggcgt cgggcagcgt gtccgatgcg
     1141 ctcggctcga cgaaggtttg gtcgccgctg tagttggcgc agggtttgtc gccgcaggaa
     1201 tccacgggcg gcgcgagtgg caccgtggtg aggactgcgc ccagatcgat gtcgtgaccc
     1261 tcgccgcagc cgaacgctgc cgctgcgagc gttacggcga cgagcgcgcg cgtcgccccg
     1321 tatgtcacgg ctcccctaag agcgtgccca gtcgcggcaa ataggcggaa tttttgtagt
     1381 gcatccggaa cagcgacgcc cgggagcgtg cctcttcgac gcggccgagt cgagcgagcg
     1441 cgacgatggc gatgtactcg cgctcttgca cgaacgagcc gtccggatag cgcgagcggc
     1501 attgttccgt gagcgcgaac gcttggagcg gatcggcagc gagggcgctc cgagcctgct
     1561 tcaagagctc gacttcgctg aggaccggag cgccggcggc aaggggagct ccggtcgcgg
     1621 tgctgggcgc ggcggggagg acgtgtgaag tggaggcacg ggacgagggc gcgctgctcg
     1681 tcgccgggac gccgacttgc cgagcgaccg cgcttggctg tgtggccgtg gtgggcggcg
     1741 tgctcggtgg ggttgcgacg ccgttagggg tggtcgcgac gccgctcggg gctgtgtctg
     1801 cgacgcccgg tgctgtcggg cgcgtggtgc ggtcgtggtc ggcgtcggca tcgagggagt
     1861 ggccgctctg cgtcgttgct ggcggtggcg cgctaggtag agcgcgcgcg tcttgggccg
     1921 tcgccgtcgc gacggaggga acggcgcctt ctggccgagg gctcggtgtc atttcgtccg
     1981 ccgaccgcac gaagagcgcc gccgtcacca cgcccgcgcc gacgacgagc gcgagcacga
     2041 cggcgagcac ccccgaatcg atgacgcgct tcaggcgagc cagggtgagg cgcgctcgct
     2101 tcggtacgcg cgtgctcgcc ggagcgtcgc catcgccgat gggcactccc gcgctcgcaa
     2161 ggcgcgccgc gatcgctgcc aggcgcgcgt cggagggcga ttccgtgcgc aggcccgcga
     2221 tgctggacgc gagctcgtcc gtcccttcgc tcaagcgtgt cggatctttg ctcacggcgc
     2281 gttcctctcg aaatcgttgc gcacgaacgt gcgggcggcc tgcaggcggg agtacgccgt
     2341 ttgcagcgga cagccgagtg cttcggcgac ctcgcggagc gtcagctctt ccacctcgta
     2401 cagcacgaac gcttgccgct tctcctcatc gagccgcccg agcgacgcaa gcagccgggc
     2461 gctcagctct cgcgtcgcca cgacgtcgag ctgcatcggg gcggcttcgt cctcgggcac
     2521 ctcgtctacg gtgatttcgc ggcgcacccg cgcgctccgg cggtactcgg acgctacgcg
     2581 gaggcagatg gcgtagagcc aactgcgcag ggctcgccca tcgaattccg gcaagcggcg
     2641 gtgcacgacc aaaaacactt cctgacaagc atcatcgacg tcgcccggcc gaacgccgag
     2701 acccaagagc gcacgccaga gagggcgcgc gtgctcccga aaaacctcgg cgaacgagag
     2761 cgcggacccc ggttgcgtga cattcgccgg gcccgcgttc acctctatta atggcaaagc
     2821 ctcgggatct ttctggtcgg gctgggtcaa aatagaaagg cgacgcccgc cgtcgccacg
     2881 accgacggag ccgacagccg gaagacctcg tggcgcgcgc cttcgacttc gacgacgaaa
     2941 cggtctgggc ggtggggaaa gagagccgag acacctaccg tggccgccca gtgcccagcg
     3001 agcggcacgg cgcctcggag cccagtggac agcgcgagca cctcgctcga cgtgcgctgg
     3061 gtcttgttca ggccgtgcgg tttcgcgctg agcgcgccgt aaacgggccc cacgcagagc
     3121 gcgccgcgca cgctgcgtgt ggttccgacc cccgtgcaga gctcgagcgt acctgccaag
     3181 aacgtaaagt gtacgctcga gccgccggtt acggcagcct cggccggaag aaaagcgagc
     3241 acaccggcac gagccgaaaa ccaaggcgcg gcgcggagct cgaccccgag cgacaacccc
     3301 ggcgcaaact tcggctcgag gccgctttcg aacgccagcg caccgtctgc gagccagtgc
     3361 atgcgttcgc cgtggctcgg gcgctcgacc ggcgcaggag gaggttcggg cgcaggcgtt
     3421 tcgggtggcg gcggcggagc gacgaccggg ctcgcctcgt cgtccaccat cagcgcgacc
     3481 gtgagcacga gcggttcgtc gaggctcgaa cagagctcgg tcgtgctcgt gagctcgcgc
     3541 gtgccgagca cgtcgcccgt ccgatccgtg agctcgagca gtgcgtgcca gtgacgatcc
     3601 ggcaggcgtt ccacgctcac gtgcagcgcc gcttcgacgg ggccggcagc gaaggcgtca
     3661 cgcccgacgt agtcgtcgac cgctcgagcc aagccttcct cgccgaggca cgtgagctcg
     3721 ggtcctggac ccgtccacga cagggcgacg gtcgacggag ccgtgccgga ctgcgcctgc
     3781 acgcgcccgc cgagcgcgaa gctactgcac gctaacaacg acgcgagcca cgtgcgcgcg
     3841 acggatcggc gacgccggcc gctcatcgac cccgcacgct agcatcactg ccacaaacaa
     3901 tagccgacgg tcgtctgcgg gtagacgtag cagctcatcc cggccgggca ggtcgagcgc
     3961 ttggttccgt ccaggcaaac gagcaggcaa tgcttctgcg tgacgaagtc gacgcaagcc
     4021 gccgacgctt ctgccgagga gggagcgctc gtgcaatcgg cgtcgttttg gcacgggttc
     4081 gagcaaccgt agccgtagac cgtggtgtcg tctcggatgc cgagacagag taacgccggg
     4141 acgtcgccgc aatcgagcga gtcaccgtga cattcgcgct cgtacggaga gctgccgtcg
     4201 gggcccggcg cgggcggcgt gctggaggcg tggcccgcag tcgcggagcc gagccgcgtc
     4261 cccgcggcgc cgttcgtgct accggcggtc gcgccgccac tgcccgtcgc gcgagcgcct
     4321 gcgctcgtgc cggtccccga agcgcctaca cttcgaccgc ctggattgtc gccgcctgcg
     4381 cgcgctccac cggcgccacc cgggctcccg cccgtactgt gtgatgaggg agcgggcgtg
     4441 gccgggtccg tcgagccgca cgccacgacg gcgccgcaga ggaacacgcc cagcgtccag
     4501 atccagccgg acggaggtcg gcgcgcgagg aacgcagcag agcgcatggc tacgtgatgg
     4561 tggaagcccg cgcgttttct gatccagcgg cgcttttttt ggggatgaca cgatttgccg
     4621 ctgcggctca gaaagcccgg cgcgagctcc cattgacgag ctgagcgcgc gtcggcgtgc
     4681 cagccgcatg aacaagctcc tcgtcgtcac cgccattttc gtcacaacgg gcgcgttgtc
     4741 cggctgctcg agcgacgcgg caggcgatcg cgcgctgccg cgggcccgcg gcacgggcag
     4801 cgctggcggc acgagcatcg tcgtcgacgt gagtagccag ggttcgggca cgccgaactc
     4861 gggcgacggc tcctcgtccg gggttggcca gtgcggcgct gcctccttca acggctgcgt
     4921 gggcaacgac ttcgagggcg agagcgtgcc gctcgacatt tacgtcatgt tcgacacgtc
     4981 gggctcgatg ctcaacgacg tgggcggcgt cacgcgactg caggcgattc aagccgctgc
     5041 gacggcattc ttgcgcgatc cggcgagtcg gggcatcggc gtgggcatcg gctacttcgg
     5101 gacgcagccg atcgggagca catcgtgcga tccggccgtg tacgcgcagc cggacgtgcc
     5161 cgtctcgacg gatcacgaag ccgtgatcgc ctcgctcgcg gcgcgtatgc ccaccggcga
     5221 aacgccgacc gccgccgcac tacgaggcgc gtgctcctac gctcgcgacg aaaagacggc
     5281 acatcccgag cgcgcgctcg tcatcctctt gatgaccgac gggaaaccgg aagctccggt
     5341 ttcgtgcgcg gcgggcggct gctgtccgac cctcgacgac gcggtgaagg ccacggccga
     5401 ttgcgcgtcc ggctcgcgcg gcatcgtcac gtacgtgctc ggcgtcggcc ccgagctcga
     5461 caacctcgac cagatcgcgg ccgccggcaa gacgcgctcg gcgtatctcg tcggtgatca
     5521 ggacgtgacc gcgaacgtgc ttgccgccct gaattccatc cgcggcgacg ccgcgatccc
     5581 ctgcgagctc tcgatcccga aaccaaccga cgggagcacc ctcgactact cgcgcgtgaa
     5641 cctcgtctat tcaacgtcgg gctgcgactt cgcgccggcg tattacgtcg attccgccgc
     5701 gagctgcgac acggccgggg gctggtacta cgacgatccg aacgcgccga gcgcggtcga
     5761 gctgtgcccc gcgacgtgcg acgacgtatc gattccgggg gcgcggctgc agttttcggt
     5821 gggctgcgcg accttgccca agccgccgcg ctgaggcgcc gctctccctt cgtccttcga
     5881 tctttcacga acgaggcaaa ccatgaatgt gcgtaaaagc agcgtgatcg gcgcggtggg
     5941 actcgccctg gcgagctacg cctgcggcgg ggagtcgaac tccggcgcga acgggtcgac
     6001 tcaagggtcc ggtgcgagcg cctcgggacc gagcggtcac ggagcgggcg gctcgagcgc
     6061 ctcgggcagc ggtaacggcg cgacgagcgg cgggccgacg ttccaaggcg caggtacgga
     6121 ttacttaccg ctcacgcccg gctgcggccc ggcgacggca tccgagtgta ccggtacgtg
     6181 cgaggcgcat gcgacgttcg acccgagcgc cgtgattcgc gcgccggcca cgctttgctt
     6241 cacgggcgat gccgacccga cgccggatga tccgctcgca accatcgagc aggtgctcga
     6301 ggtcatcggt ggcaagcgcg tgatccacct gcgcattacg ttcgacccgg cgttcgtgga
     6361 caatacttac gggcaaaatg cgtccagcgg ttggtctggc accgacacgg gcacggacgc
     6421 gggcgctgcg cctgcaccgg gcgcacagcc cggcatgatg ccgggtatga aaccgggtat
     6481 gaaaccggga cggcacgggc ataccttctc cgacttggtg ggcagcgacc acgtcgagct
     6541 gttgctcacg gacggcgccg gcaagacggt catggacttc gacgtggact acattacggc
     6601 cgcttcgggc acctgtggct atcggacgct cggcgtcacc ggcggcgaag gaaaaatcgt
     6661 cagcggcaac gcatccgccg tcctcggagc ggctacgtcg ctcgatcgcg acctcaacgg
     6721 ctgcggctac tgctacacga ccgactcacc ggcgacggac gacaactaca cgcccaacgc
     6781 ggccacaccc gcgtgggatt accgcgtcgt ttacgaagtg tggctcgacc tcgacgcatt
     6841 cggcagcagc ggtttcggac aggcgtacat caacaacgtg catgcgtctc cctccaaact
     6901 gtccagcgac accgtgacgg tgacgcccac ctcgtgtccg aacgattggg atactccaca
     6961 cggcggcacg tgcccgcaga actacacggt gtacgttcag agcgagggca aaagctcgtg
     7021 cgtgccgatc cccttcgcca attacccgaa catggcgccg tgcccgagcg ggtacacgct
     7081 cgatctcgcg acggaaggca agtactgcat tccagagtaa ggcttcctta gctttcctct
     7141 tcacggctgc cgtgacacgt acggcgcgcc atgggtgagc cgtgctgcgc cgggacgacg
     7201 tggttctgat atcagttcac cggaacgaga tcctcgatca gcagctccgt ct
//
LOCUS       DATIML010000236         5821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3224257, whole genome shotgun sequence.
ACCESSION   DATIML010000236 DATIML010000000
VERSION     DATIML010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5821
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3224257"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1425
                     /locus_tag="VLJ38_04110"
     CDS             <1..1425
                     /locus_tag="VLJ38_04110"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HSU38722.1"
                     /translation="ERATKVNFEVPLTWLVWLTSIVSLSATFVVSYLLIPELGDGTLW
                     WKLSLIISCGTLAGAIIPELIKVFTSTSSGHVAEVVTSSREGGASLNVLSGLTAGNYS
                     SFWMGIVLMLLMGAAYYVSGMGLHTLMLAEPVFAFGLVAFGFLGMGPVTIAVDSYGPV
                     TDNAQSVFELSLITEIPGVKEEIEKKHGFKVDFEKAKALLEENDGAGNTFKATAKPVL
                     IGTAVVGATTMIFSIVVLLTDGLTKNIDKLSILYPPFLLGLLAGGSVIFWFTGASTQA
                     VVAGAYRAVEFIKRNMKLDGEAKASIEDSKKVVQICTQYAQKGMFNIFLTVFFATLSF
                     ACLEPFFFIGYLISLALFGLFQALFLANAGGAWDNAKKVVETELHEKGTDLHAAAVVG
                     DTVGDPFKDTSSVAMNPIIKFTTLFGLLAVELAIDLERSTSAILAVVFGLAMLFFVHR
                     SFYGMRITSAASEASGNTAPSPAE"
     gene            complement(1501..2421)
                     /locus_tag="VLJ38_04115"
     CDS             complement(1501..2421)
                     /locus_tag="VLJ38_04115"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSU38723.1"
                     /translation="MRVLSGTSGFSYDEWHGRFYPADLPASERLTHYSGRLASVEINN
                     TFYQTPKPALLERWRAAVSTEFRFALKAPRRITHIQRLKGSADALAYFWSAASVLGET
                     LGPVLFQLPPFAKKDLPLLADFLASLPAGLRAAFEFRNPSWFDDEVYALLSSRNAALC
                     GGDSDEDARSPPLVATADFGYLRLRAPSYDAPALRTWCERVLAEPWQTAYVYLKHEVL
                     GPDYAAFFGALARGEPEPAFPAPLDAPVAVPYAMAKKRAPKAKTSDTPSAAEPKPSKR
                     AKSKPAQNAAPKVVEAATKPAPRTARRTGK"
     gene            2452..4002
                     /locus_tag="VLJ38_04120"
     CDS             2452..4002
                     /locus_tag="VLJ38_04120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38724.1"
                     /translation="MRRSQAVSQPPPATTPLEHAASLTVGQTFAGRFRVEEQVSATLG
                     GVFFGTDDTSGEKIVLIPVSAEREKTLRPLLGISHAHLAPLLALEGDDDHFVAVAAVA
                     EGETLAERLEAIGKKPAVDAVRSALRIADVLSHVHDAGGVHGWVSPHAVVIEPLEGEA
                     PLLALGVRIDQALSTPERAPDGVPSIADDTWATAALLLWMLTGSPPPASGYTSESELE
                     GAGVTNAALRSALWHTLTANRPDRQSDLRPLRRELARWFVDHANEEPIAPGHHASAPP
                     PLPASMRPSRQSNRPLSQPPPKRRIGAFALAALALGAAGGIALSFLRPKRIQLVALPE
                     QTAEAAPSASALQIGDVPVTGEDDVRIGSKLAACVSSHLPKGTFNKAPAVEWLCSETD
                     PRVGADKLHAAIVSGAPRGAVTDSMKIFSRIGWYAMPVFAVVRVGCCPGAKPLALPDE
                     HCAMSAALTGVGDAVEASEDVTEPLKKYTDSIHCELNHGGAKMLRRAERPAGGEDTAF
                     LELLKHLE"
     gene            4029..4319
                     /locus_tag="VLJ38_04125"
     CDS             4029..4319
                     /locus_tag="VLJ38_04125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38725.1"
                     /translation="MRDVATLIVQFAATIFVSAWVVRRDLKHLAPDLLSRAWPESSFW
                     SAVVCFSPICVPVHFVRTRRSAVGVALGIAWFFATVVTVNGLAWVVDTAFGG"
     gene            4463..5449
                     /locus_tag="VLJ38_04130"
     CDS             4463..5449
                     /locus_tag="VLJ38_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU38726.1"
                     /translation="MQDVRALNDVVAKESAFVDDLTAEIGKVIVGQQQMVERILVGLL
                     AGGHVLLEGVPGLAKTLTVRTVCDAISAKFARVQFTPDLLPADLIGTVIYDQKTGEFT
                     SKLGPIFANLVLADEINRAPAKVQSALLEAMQEHQVTIGDRSYPLPDPFVVMATQNPI
                     EQEGTYPLPEAQVDRFMLMVKVGYPSREEERSVMDRMTGARESRAVAKTSPVQLLEAR
                     KVVRDVYMDDRVKDYIVNVVFATREPEKNGLKELAPLIEYGASPRASIALNLAARAHA
                     FLRHRGYVTPEDVKAIGPDVLRHRVVLSYEAEAEEVSAEDIVRRVFEVVEVP"
     gene            5505..>5821
                     /locus_tag="VLJ38_04135"
     CDS             5505..>5821
                     /locus_tag="VLJ38_04135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSU38727.1"
                     /translation="MIPKELLKALRKIEITTNRLATEQLAGSYTSVFKGQGLAFREVR
                     EYQPGDDVRTIDWNVSARMNSTYVKVFVEEREMTMMLVVDLSASQRFGTHTASKARLA
                     AEVA"
BASE COUNT          945 a         1985 c         1922 g          969 t
ORIGIN      
        1 gaacgtgcca cgaaggtgaa cttcgaggtg ccgctcacct ggctcgtctg gctcacgtcg
       61 atcgtctcgc tctcggcgac cttcgtcgtg tcctacctcc tcatccccga gctcggcgac
      121 ggcacgctgt ggtggaagct ctcgctcatc atctcctgcg gcacgctcgc cggcgccatc
      181 atccccgagc tcatcaaagt cttcacctcg acgagctccg ggcacgtggc cgaggtcgtc
      241 acttcgtcgc gtgaaggcgg cgcgtcgctc aacgtgctgt cgggtctcac ggccggcaat
      301 tacagctcct tctggatggg catcgtgctg atgctcctca tgggcgccgc ctactacgtg
      361 agcggcatgg gcttgcacac gctgatgctc gccgagcccg tcttcgcgtt cggtctcgtg
      421 gcgttcgggt ttctcggcat ggggccggtc acgatcgccg tcgattcgta cggtccggtg
      481 acggacaacg cgcagagcgt cttcgagctc tcgctcatca ccgagatccc gggcgtcaag
      541 gaagagatcg agaagaagca cggcttcaag gtcgatttcg agaaggcgaa ggcgttgctc
      601 gaggagaacg acggcgccgg caacaccttc aaggcgacgg ccaagcccgt gctgatcggc
      661 accgcggtcg tcggcgcgac cacgatgatc ttctcgatcg tcgtgctgct caccgacggc
      721 ctgacgaaga acatcgacaa gctctcgatc ctgtacccgc cgttcctgct cggcctgctc
      781 gcgggcggtt cggtgatctt ctggttcacg ggcgcgagca cgcaggcggt cgtcgccggc
      841 gcctaccgcg cggtcgagtt catcaagcgc aacatgaagc tcgacggcga ggccaaggcg
      901 tcgatcgagg acagcaagaa ggtcgtccag atctgcacgc agtacgcgca gaagggcatg
      961 ttcaacatct tcttgaccgt gttcttcgcg acgctctcgt tcgcgtgcct cgagccgttc
     1021 ttcttcatcg gctacctcat ctcgctcgcg ctcttcggcc tgttccaggc gctcttcctc
     1081 gccaacgcgg gcggcgcttg ggacaacgcc aagaaagtgg tcgagaccga gctccacgag
     1141 aagggcacgg acctacacgc cgcggccgtc gtcggcgaca cggtcggcga ccccttcaag
     1201 gacacctcgt ccgtcgcgat gaacccgatc atcaagttca cgacgctctt cggcctgctc
     1261 gccgtcgagc tcgcgatcga cctcgagcgc tcgacgagcg cgatcctggc cgtggtgttc
     1321 ggcctggcga tgctgttctt cgtgcaccgc tccttctacg gcatgcgcat cacgagcgcg
     1381 gcgagcgaag cgagcggcaa tacggcgcca tcgcccgcgg agtgagcggc gcgcgtagcg
     1441 gaactcaccc cagagcgtcg gcggctcgca ccgctgccgc tctgggtggc tgacggtccg
     1501 ctattttccg gttcggcgcg cggttcgcgg cgccggtttc gtcgcggctt cgacgacttt
     1561 gggcgcggcg ttctgcgccg gtttggactt cgcgcgcttc gacggcttcg gttcggcagc
     1621 gctcggcgtg tcgctcgtct tggccttggg cgcgcgtttc ttggccatcg cgtacggaac
     1681 cgcgacgggc gcgtccaagg gcgcaggaaa tgccggctcg ggttcgccgc gagcgagcgc
     1741 tccgaagaag gcggcgtagt cgggaccgag cacttcgtgc ttcaggtaga cgtacgcggt
     1801 ttgccacggc tcagcgagga cacgctcgca ccaggtgcgg agcgcgggcg cgtcgtagct
     1861 cggcgcccgc agcctcaagt agccgaaatc ggccgtggcg acgagaggcg gcgagcgggc
     1921 gtcttcgtcg gaatcgccgc cgcagagcgc ggcgttgcgt gacgaaagga gcgcgtacac
     1981 ctcgtcgtcg aaccacgacg gattgcgaaa ctcgaacgcc gcgcgcaggc ccgcgggcaa
     2041 gctcgcgagg aaatcggcga gcagcggcag atccttcttc gcgaagggcg ggagctgaaa
     2101 aagcaccggc ccgagcgttt ccccgagcac ggaagcggcg ctccaaaagt acgcgagcgc
     2161 gtccgccgaa cctttgagcc gctgaatgtg cgtgatgcgg cgcggcgctt tcagcgcgaa
     2221 ccggaattcg gtgctgacgg cagcgcgcca gcgctcgagg agcgcgggtt tcggcgtttg
     2281 gtaaaaggta ttgttgatct cgacgctcgc gaggcggccc gaatagtggg tgaggcgctc
     2341 actggccgga agatcggccg gataaaagcg tccgtgccat tcgtcgtagc tgaaaccgct
     2401 ggtgcccgag agtacgcgca cggcctccaa tatggacctt tcgggccgca aatgcgacgc
     2461 tcccaggcgg tgagtcagcc gccgccagcc accactcctc tggagcacgc cgcgagcctg
     2521 accgtggggc agaccttcgc gggtcgcttt cgcgtggagg agcaggtctc cgccacgctc
     2581 ggcggcgtct tcttcggcac ggacgacacg agcggagaga aaatcgtgct catccccgtc
     2641 tcggccgaac gggaaaaaac gctgcggccg ctgctcggca tctcccacgc ccacctcgcg
     2701 cccctgctcg cgctcgaagg cgacgacgac catttcgtcg ccgtggcggc cgtcgcagag
     2761 ggtgagacgc tcgccgagcg gctcgaagcc atcggcaaga agccggccgt cgatgcggtg
     2821 cgctcggcgt tgcgcatcgc ggacgtgctc tctcacgtgc acgatgccgg cggcgtgcat
     2881 ggctgggtca gtccgcacgc cgtcgtcatc gaaccgttgg agggcgaagc gccgctcctc
     2941 gcgctcgggg tccgcatcga tcaggcgctc tcgacaccgg agcgcgcgcc ggacggcgtt
     3001 ccgagcatcg ccgacgacac ctgggcgacc gcggcgctct tgctttggat gctcaccggt
     3061 tcgccgccgc ccgcctccgg ctacacgagc gagagcgagc tcgaaggcgc cggcgtcacc
     3121 aacgccgcgc tccgctccgc gctctggcac acgctcacgg cgaatcggcc cgaccgccag
     3181 agtgatctgc ggccccttcg gcgggagctc gcgcgctggt tcgtcgatca cgcgaacgag
     3241 gagccgatcg cgcctggtca tcatgcctcg gcgccgccgc cgctgcccgc gagcatgcgt
     3301 ccgtcacgcc aatcgaatcg gccgctttcg cagccaccgc cgaagcgccg catcggcgcg
     3361 tttgcgctgg cggcgctcgc cctgggcgcc gcggggggca ttgcgctctc gttcctgcgc
     3421 cccaagcgta ttcagctcgt cgcccttccc gaacaaaccg ctgaggccgc gccgagcgcc
     3481 tctgccctac aaatcggcga cgttcccgtc accggggaag acgacgtgcg catcggcagc
     3541 aagctcgcag cgtgcgtctc gagtcacctg ccgaaaggca ccttcaacaa ggcccccgct
     3601 gtcgagtggc tctgcagcga gaccgatccg cgcgtgggcg ccgacaagct ccacgccgcc
     3661 atcgtctccg gcgcgccgag gggtgcggtg accgactcga tgaagatctt ctcgcgcatc
     3721 ggctggtacg cgatgcccgt cttcgcggtc gtgcgcgtcg gctgctgccc tggagcgaag
     3781 ccgctcgcgc tacccgacga gcattgcgcg atgtcagcgg ccttgaccgg cgtgggcgac
     3841 gccgtggaag cgtccgaaga cgtgacggag ccgctcaaga agtacacgga cagcatccac
     3901 tgcgagctca accacggcgg cgccaagatg ctcagacgcg ctgagcggcc cgccggcggt
     3961 gaagacacgg cgttcctgga actgctcaag catttggagt agcgaacggg cgagtccttc
     4021 gggagcccat gcgcgacgtc gccacgctca tcgtgcagtt tgccgccacg atcttcgtgt
     4081 cggcgtgggt cgtgcgccgc gatttgaagc acctcgctcc ggacctgctc tcgcgcgcct
     4141 ggcccgagtc gtcgttctgg tcggcggtcg tctgtttcag ccccatctgc gtgcccgtgc
     4201 atttcgtgcg cacgcgccgc tcggcggtcg gggtggcgct cggcatcgcc tggttcttcg
     4261 cgacggtcgt caccgtcaat gggctcgcgt gggtcgtgga caccgccttc ggcggctgag
     4321 cggccccggg gcgaactggc cggcgttccg cgcgccgctt gtttgcagcg gcccgggaat
     4381 agcctcctgc gcccgattgt cttggccccg ccgagcgcgc tatgacgcgc cactgccaaa
     4441 gcgagcctag aggatttttg acatgcaaga cgtacgagcg ctgaacgacg tcgtcgccaa
     4501 ggaaagcgcc ttcgtggacg acctgaccgc ggagatcggc aaggtcatcg tgggccagca
     4561 gcaaatggtc gagcggattt tggtggggct gctcgcgggc ggacacgtct tgctcgaagg
     4621 cgtgcccggc ctcgccaaga ccctcaccgt gcgcaccgtg tgcgacgcca tcagcgcgaa
     4681 gttcgcgcgc gtgcagttca cgcccgacct cttgccggcc gacctcatcg gcaccgtcat
     4741 ctacgatcag aagacgggcg agttcacgag caagctcggt ccgattttcg cgaacctcgt
     4801 gctcgccgac gagatcaacc gcgcgcccgc caaggtgcag agcgcgctgc tcgaagccat
     4861 gcaagagcac caggtcacga ttggcgatcg cagctatccc ctgcccgacc ccttcgtcgt
     4921 gatggcgacg caaaacccca tcgagcaaga gggcacctac ccgctgccgg aggcccaggt
     4981 cgatcgcttc atgctcatgg tcaaggtcgg ctatccctcg cgcgaggaag agcgcagcgt
     5041 gatggatcgc atgacgggcg cgcgcgagag ccgcgccgtc gcgaagacct cccccgtgca
     5101 gctgctcgaa gcgcgcaagg tcgtgcgcga cgtgtacatg gacgaccgcg tcaaggacta
     5161 catcgtcaac gtcgtgttcg cgacgcgaga gccggaaaag aacggcttga aagagctcgc
     5221 gccactcatc gagtacggcg cgagcccgcg cgccagcatc gcgctgaacc tcgcggcgcg
     5281 cgcccacgcc tttttgcgcc accgcggcta cgtcacgccc gaggacgtga aggccatcgg
     5341 ccccgacgtg ctccgacacc gcgtcgtgct ctcgtacgaa gcggaagccg aagaggtctc
     5401 cgccgaagac atcgtgcggc gcgtgttcga ggtcgtcgag gtgccctgag ccccgcgggg
     5461 gccgacgcac gagggcgcga gacaggcttc gctccggacg acccatgatc ccgaaggaac
     5521 tcctcaaagc gctgcgcaag atcgagatca cgaccaaccg gctcgcgacc gagcagctcg
     5581 ccggtagcta cacctccgtc ttcaaaggtc agggtctcgc gttccgcgaa gtgcgtgaat
     5641 accagccggg cgacgacgtg cgcacgatcg actggaacgt gagcgcgcgc atgaactcca
     5701 cgtacgtcaa agtattcgtg gaagagcgcg agatgaccat gatgttggtc gtcgacttgt
     5761 ccgcgagtca gcgcttcggc acgcacaccg ccagcaaggc gcgcctcgcc gccgaggtgg
     5821 c
//
LOCUS       DATIML010000237         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2935249, whole genome shotgun sequence.
ACCESSION   DATIML010000237 DATIML010000000
VERSION     DATIML010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2935249"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2277
                     /locus_tag="VLJ38_04140"
     CDS             <1..>2277
                     /locus_tag="VLJ38_04140"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HSU38728.1"
                     /translation="TPPDKLEAIIRGGGRRGEVYAALKALVERYGDHIRRTFPELERR
                     VSGYTLDALLPENGFHVARALVGSESTLVTILQATLHLVPAPRARTVVMLGFESIDVG
                     AHCGLEVLNFSPTACEGIDRLLFQYVKQKGDENASLALLPRGDAFVLAEFGGESRAES
                     DELARRMMDHVKTLGAIAPVDMKLYDDPQQEEMIWAVREGGLGSTAWVPGQPDMWPGW
                     EDSAVPTAHVPEYLRELRALFDRFDYHPALYGHFGQGCVHCRVGFDLYTATGIANYRR
                     FAREAVELVKKFGGVASGEHGDGQARGELLPSLFGAETMEAFTAFKRIWDPQNRMNTG
                     KVINLEGAPLGITDKMRLGTDYEPPQPETHFRYPSDRGSFARAALRCVGVGTCRREGG
                     GTMCPSYMVTREERHSTRGRARLLFEMLNGEVLEDGWKSEAVKEALDLCLSCKGCKGD
                     CPVNVDMATYKSEFLSHYYERRLRPRHAYAFGWIHNWSRLFSLAPTLVNLCMRLPVLG
                     SIVKFLGGVEQRRTIPAFAPKRFKTWFRERGVKNADSPAVVLFPDTFTDFFHTDIAIA
                     ATRVLEDAGFRVLVPMDDVCCGRPLYDYGFHELAKRRWDGVLRVLRPYYRADVPIVVL
                     EPSCWAAFKDELTNLLPNDEDAKRLHRNILTISEFLRSHAQHYVLPKISRKALVQGHC
                     HQKALDQLNDKEIGRLFAEKHVYDAMGIEHREPDTGCCGMAGSFGYEGENDHYEVSVA
                     CGERALLPLVRQAGDDELV"
BASE COUNT          387 a          737 c          769 g          384 t
ORIGIN      
        1 cacgccgccc gacaagctcg aggcgatcat ccgaggcggt ggacgtcgcg gcgaagtgta
       61 cgcggcgctc aaggccttgg tggaacgcta cggcgaccac atccgccgga ccttcccgga
      121 gctcgagcgg cgcgtctccg gttacaccct cgacgcgctc ctgcccgaga acggatttca
      181 cgtcgcgcgg gcgctcgtcg gctcggaatc gacgctcgtg accatcctgc aggcaacgct
      241 gcacctcgtg ccggcgcccc gcgcgcgcac ggtcgtgatg ctcggcttcg aaagcatcga
      301 cgtgggagcc cactgcgggc tcgaggtgct gaatttttcg cccactgcgt gcgagggcat
      361 cgatcggctg ctgtttcagt acgtcaagca gaagggcgac gagaacgcga gtctcgcgct
      421 cttgccgcgc ggggacgcct tcgtgctcgc ggagttcggc ggcgagtcgc gcgccgaaag
      481 cgacgagctc gcacgccgca tgatggacca cgtgaagacg ctcggcgcga tagcgcccgt
      541 cgacatgaag ctctacgacg acccccagca ggaagagatg atttgggccg tccgcgaagg
      601 cggcctcggc agcacggcgt gggtgccggg ccaacccgac atgtggccgg gctgggaaga
      661 ctccgctgtg ccgacggccc acgtgcccga gtacctgcgc gagctgcggg cgctcttcga
      721 ccgcttcgac tatcacccgg cgctctacgg ccacttcggc cagggctgcg tgcactgtcg
      781 cgtcggcttc gatttgtaca cggcgacggg catcgcgaat taccggcgct ttgcgcgcga
      841 agccgtggag ctcgtgaaga agttcggcgg cgtcgcctcc ggcgaacacg gcgacgggca
      901 agcgcgtggc gagcttctgc cgagcctgtt cggggcggaa acgatggaag ccttcacggc
      961 gttcaagcgc atctgggatc cgcaaaaccg gatgaacacg ggcaaggtga tcaatctcga
     1021 gggcgcgccg ctcggcatca ccgacaagat gcgcctcggc accgactacg agccgcccca
     1081 accggagacg cattttcggt acccgagcga tcgcggcagc ttcgcgcgcg cggccctgcg
     1141 ctgcgtcggt gtcggcacgt gccgtcgtga aggcggcggc acgatgtgtc cgtcgtatat
     1201 ggtgacgcgg gaagagcgtc actcgacgcg cggtcgcgcg cgcttgctgt tcgagatgct
     1261 gaacggcgag gtcctcgagg acggttggaa gagcgaggcg gtcaaggagg cgctcgatct
     1321 ttgcctctcg tgcaagggct gcaaaggcga ctgcccggtc aacgtggaca tggccacgta
     1381 caagtccgag ttcttgagcc actactacga gcgtcgcctg cgcccgcggc acgcctacgc
     1441 tttcggctgg atccataact ggtctcggct tttttcgctc gccccgacgc tcgtgaacct
     1501 ttgcatgcgt ctgcccgtgc tcgggagcat cgtgaagttc ttgggcggcg tcgagcagcg
     1561 gcgcacgatc ccggcgttcg cgccgaagcg cttcaagacg tggtttcgag agcgcggcgt
     1621 gaagaacgcc gacagccctg ccgtcgtgct cttccccgac acgttcacgg atttctttca
     1681 caccgacatc gcgattgccg cgacgcgcgt gctcgaggac gccggttttc gcgtgctcgt
     1741 gccgatggac gacgtgtgct gcgggcggcc actctacgat tacggatttc acgagctcgc
     1801 gaagcgacgc tgggacggcg tgcttcgcgt gctgcggccg tattatcgcg ccgacgtgcc
     1861 gatcgtcgtg ctcgagccga gctgctgggc cgcgttcaaa gacgagctca cgaacctgct
     1921 gccgaacgac gaagacgcga agcggctaca ccgcaacatc ctgaccatct cggaatttct
     1981 gcgcagtcac gcgcagcact acgtgctgcc gaagatctcc cgcaaggcgc tcgtccaagg
     2041 gcattgtcac cagaaggcgc tcgaccagct gaacgacaag gaaatcgggc ggctcttcgc
     2101 cgaaaagcac gtgtacgacg cgatgggcat cgagcaccgc gagcccgaca cgggctgctg
     2161 cggtatggcg ggttcgttcg ggtacgaggg tgagaacgac cattacgagg tgagcgtcgc
     2221 gtgcggcgag cgcgcactct tgccgctcgt caggcaagcc ggcgacgacg agctcgt
//
LOCUS       DATIML010000238         2561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2068517, whole genome shotgun sequence.
ACCESSION   DATIML010000238 DATIML010000000
VERSION     DATIML010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2068517"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="VLJ38_04145"
     CDS             complement(<1..362)
                     /locus_tag="VLJ38_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSU38729.1"
                     /translation="MARDTHLFSGIVPFVATADARSFREAARRLGVTTSSVSKAVAKL
                     EAVLGTRLLHRTSRHVSLTSEGAAFAEQCRAAVEQVRAARDTVTQAERSLRGLLRVSL
                     PLPLGRAVVMPALKRFIDR"
     gene            479..1336
                     /locus_tag="VLJ38_04150"
     CDS             479..1336
                     /locus_tag="VLJ38_04150"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSU38730.1"
                     /translation="MADAIDLGHGVTVHVHACGEEGIFVNAYLVETARGVVAIDGTLT
                     VSTGRSLRERLASLNKPLLAVLVTHPHPDHVAGIAELSRGAEVPILATAPVLELMRTL
                     EEPKRKQWGPVYKEEWVAAWRYPNRVLADGELSHFDGVSYRVHDLGSGGDSEANSVFT
                     LEGPARTAFLSDVVFNGVHAYLADGGVLAWLANLERVGDLCAGMPLVFPGHGPPGKPE
                     ELVARQRSYLLAYLRAVKELAGGRRTLSEAEKQTLTRRMQDHLPEAGLAFLVGMSADA
                     VAAELAGAR"
     gene            complement(1379..1957)
                     /locus_tag="VLJ38_04155"
     CDS             complement(1379..1957)
                     /locus_tag="VLJ38_04155"
                     /inference="COORDINATES: protein motif:HMM:NF017939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-(ms[2]io[6]A)-hydroxylase"
                     /protein_id="HSU38731.1"
                     /translation="MLALRVPTSSAWLDAVFSDFGAFLVDHAACEKKAFSTGMALVSR
                     YPERQALVTELIAFAREELGHFALVHGILAARGLTLARDAPDEYARALRGQVRSHGDG
                     ELCDRLLVAGIIEARSCERLGLLADALPAREPLLADTYRELCRAEARHHGLFFRLCRE
                     AVGELETERRAAELLAFEAGVVGRLPLRASVH"
     gene            complement(1961..2377)
                     /locus_tag="VLJ38_04160"
     CDS             complement(1961..2377)
                     /locus_tag="VLJ38_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSU38732.1"
                     /translation="MKTHQAVLEVATRGRGFANVTERVEGVVRASGVRTGLCVVFCQH
                     TSASLVIQENADPAVLRDLERWLSELAPEARAWEHDAEGPDDMPAHAKSAVTRASETL
                     PVANGELALGTWQALYVWEHRARAHSRRLLVTVQGD"
BASE COUNT          407 a          874 c          908 g          372 t
ORIGIN      
        1 cggtcgatga agcgcttgag ggccggcatg acgacggcac gtccgagcgg cagcggcagc
       61 gagacgcgca agagtccgcg tagcgagcgc tcggcttgcg tcaccgtatc gcgcgcggcg
      121 cggacctgct cgaccgcagc gcggcattgc tccgcgaagg ccgcgccttc gctcgtcagc
      181 gacacgtgac gcgaggtgcg gtgcaagagg cgtgtgccga gcaccgcttc gagcttggcg
      241 acggctttgc tcacgctgga cgtggtgacg ccgagccggc gcgcggcctc gcgaaagctg
      301 cgcgcgtcgg ccgtcgcgac gaaggggacg atcccgctga aaaggtgggt gtcgcgcgcc
      361 atcgttgcct ttcattcaac gctaacatga ccgctggggc gctggcgccc cgagcgacgg
      421 ctacctagat cgaagcccat gaaacaatcg caaggcacgc cagacaacgg ggcacaccat
      481 ggctgatgca atcgatctcg gacacggcgt gacggtgcac gttcacgcct gcggcgagga
      541 gggaattttc gtcaatgcgt acttggtcga aacggcgcgc ggcgtcgtag ccatcgacgg
      601 cacgctcacg gtcagcacgg ggcgctcgct tcgcgagcgg ctcgcgagct tgaacaagcc
      661 gctgctcgcc gtgctcgtca cgcatccgca tccggaccac gtggcgggca tcgcggagct
      721 ctcgcgtggc gccgaggtgc ccatcctcgc gacggcaccg gtgctcgagc tgatgcgcac
      781 gctcgaggag cccaaacgca agcagtgggg ccccgtgtac aaggaggaat gggtggcagc
      841 gtggcgctat ccgaatcgcg tgctcgctga cggcgagctc agccacttcg acggcgtgag
      901 ctatcgcgtg cacgacctcg gttccggcgg cgacagcgag gcaaactcgg tgtttacgct
      961 ggaaggaccg gcgcgcactg cgttcttgag cgacgtggtg ttcaacggcg tgcacgcgta
     1021 tctcgcggac gggggcgtgc tcgcctggct cgcgaacctc gaacgcgtcg gggacctctg
     1081 cgcgggcatg ccgctcgtat ttcccggcca tggtcccccc ggtaagcccg aagagctcgt
     1141 cgcccggcaa cggagctatc tgctcgccta cctgcgcgcg gtgaaggagc tcgccggtgg
     1201 tcgtcgcacg ctgtcggagg cggaaaaaca gacgctgacc cgtcggatgc aggaccattt
     1261 gccggaagcc gggctcgcgt tcctcgtcgg catgagcgcg gacgccgtcg ccgcggagct
     1321 tgccggagcg cgctaggagc tctgcgcggt cggggcctga cggcgactgg ccgccgcgct
     1381 aatgcacgct cgctcggagc ggcagcctac cgacgacgcc cgcctcgaac gcgagtagct
     1441 cggccgcgcg gcgctctgtc tcgagctcgc cgaccgcttc acggcacagc cgaaagaaga
     1501 gcccgtgatg gcgcgcctcg gcgcggcaga gctcgcggta cgtgtccgcc aagagcggct
     1561 cgcgcgcggg caaggcgtcg gcgagcaatc cgagccgctc acagctccgc gcctcgatga
     1621 tgccggcgac gagcagccga tcgcagagct caccgtcgcc gtgggagcgc acctggccgc
     1681 gcagggcgcg cgcgtattcg tcgggcgcgt cgcgcgcgag cgtcaagccg cgcgccgcga
     1741 ggatcccgtg cacgagcgcg aaatggccga gctcttcccg cgcgaacgcg atgagctcgg
     1801 tcacgagcgc ttgccgctcg ggataacgcg agacgagcgc catgcccgtc gaaaacgcct
     1861 tcttttcaca ggcggcatga tcgacgagaa aggcgccgaa gtccgagaac acggcgtcga
     1921 gccaggccga gctcgtcgga acgcgcagcg cgagcaccgc tcagtctccc tgcaccgtga
     1981 cgagcaggcg ccgcgaatga gcgcgggcgc ggtgttccca gacgtagagc gcttgccagg
     2041 tgccgagcgc gagctccccg ttcgcgaccg gcagcgtttc actcgcgcga gtcacggccg
     2101 atttggcgtg cgcgggcatg tcgtcggggc cttcggcgtc gtgctcccaa gcgcgagcct
     2161 cgggtgcgag ctccgaaagc cagcgctcga gatcgcgcag caccgcgggg tcggcgtttt
     2221 cttggatcac gaggctcgcc gaggtgtgtt ggcaaaacac gacgcaaagc cccgtgcgca
     2281 cgccgctcgc gcgcacgacg ccctcgacgc gctcggtgac gttcgcgaag ccgcggccgc
     2341 gggtcgcgac ttccaggacg gcttgatggg tcttcacgat ttctcgaccg ttcggcgcgc
     2401 aagacgtctt agcgcccgcg cgcgtggctg tccgtgactc gccgcgttca tggcgccgcg
     2461 gcgtccttcg gggcgaggcc tacgcaggta ccccagcccg gcggcagcgc gggcgacgcc
     2521 tggcaacgac aagtgccggc cgccccgact tcacacagcc g
//
LOCUS       DATIML010000239         3109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1781216, whole genome shotgun sequence.
ACCESSION   DATIML010000239 DATIML010000000
VERSION     DATIML010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3109
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1781216"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..1850
                     /locus_tag="VLJ38_04165"
     CDS             81..1850
                     /locus_tag="VLJ38_04165"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU38733.1"
                     /translation="MPLVRSAYSLPFVICLAAGCGHGSDASNDDAGAQAPSRVEGQPG
                     TPNLPPELARRPSAPPNASAAPTPAAPGASGTADAGAPVPEAPRALSPFPEQPQHPGP
                     WFVVTSPAAGVYSEPSFERSAKIGWVRSGGKLPVRDAPASRKGCTAGWYEIVGGGFIC
                     GNYGTTNLASPDVKFSMTPPNLNEVLPYAYARNAKHGTPLYHSVPSREQMLKYEPYLN
                     EKKPEPAPSSAPNIAAAPTAPPSIVAAAAAAATPISPVSMATVDAGVPLDPNLSDPDP
                     DKPWWQRDKDQIKEHLHEIKLDSLSADADDILAKRMVQGFFVAIDRTFRWNDRTWYKT
                     TKTLIAPAERFWQTGASKFQGVELDGEHFKLPVAWGYGGRKQVATYQLDEVKKQLRPA
                     KSIDRQVAIALTGRATDLGGTHYVETSEGTWLKANQVRITEPAEAPAGLAPDERWIDV
                     DLSTQTLVAFVGTRPVYATLISSGKESKDKEKDHRTPTGEFRIREKHVTTTMDGDGTA
                     AGDLPYSIEDVPYVEYFYRAFALHGAFWHSNYGVQMSHGCVNLSPLDAKWLFFFTSPE
                     FRAGFHGMWARPEGSGTRVIIHD"
     gene            1897..2901
                     /locus_tag="VLJ38_04170"
     CDS             1897..2901
                     /locus_tag="VLJ38_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38734.1"
                     /translation="MDQFSAHLDRGWDLVQRGDPRGAELSARRALELDSQSPEAHNLL
                     GYVAALKGEFEDAIDSYRQAIALDDTYLEAMLNAAEVYIHPLGEFDEAIAMCDQALEL
                     AETDDEVVDALLLKFDALLGKGETDGAREVCARFPAGPFENPSHLFLVGRAHYEVGDA
                     ERAFPLVEEAVKRNGRNAEAWYYLGLIRDERGDTTGATQAFLRSRELDLEVPAPPWSL
                     SRETFETTARRAIDALPESLKVYVREGEVYVAEVPGVEVVVDGVDPRALLLLDGINTE
                     DKTLPLTARVFVYQRNVERLAGSIELVESEIGAALEREITATFLDPEPDHSVPPGHLN
                     "
     gene            complement(2926..>3109)
                     /locus_tag="VLJ38_04175"
     CDS             complement(2926..>3109)
                     /locus_tag="VLJ38_04175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38735.1"
                     /translation="DQEPVAVVSQSVRESGACDEVRRRAREHTARAIAALEAVAMCPA
                     RSLLTSVASELAARAA"
BASE COUNT          546 a         1108 c          980 g          475 t
ORIGIN      
        1 cttgtagaga ggaccggccg gctcgccaag aactggcgaa agctgccccg ttcatggaaa
       61 gactgcgtac tcgacccccg atgcccctcg ttcgttccgc ttactccctg cccttcgtca
      121 tttgcctcgc cgccggctgc ggccatggct ccgacgcttc caacgacgac gctggcgctc
      181 aggccccctc gcgcgtcgaa gggcagccgg gcacgccgaa cctcccgcca gagctcgccc
      241 gccgaccgag tgccccgccg aacgccagtg cggctccgac acctgccgcc cccggcgcga
      301 gcggaaccgc ggacgccggg gctccggtgc ccgaagcgcc ccgcgcgctc agtccgtttc
      361 ccgaacagcc gcagcacccc ggcccctggt tcgtcgtgac ctccccggcg gcgggcgtct
      421 acagcgagcc gtcgttcgag cggagcgcca agatcggctg ggtgcgaagc ggcggtaagt
      481 tgcccgtccg tgacgctcct gcgtcgcgca agggctgtac ggccggttgg tacgagatcg
      541 tgggcggcgg gttcatctgc ggcaattacg gaacgacgaa cctcgcgagc cccgacgtga
      601 agttctcgat gacgccgccg aacctgaacg aggtcttgcc ttacgcgtac gcgcgcaacg
      661 ccaaacatgg cacaccgctt taccactcgg ttccgtcgcg cgagcagatg ctcaagtacg
      721 agccgtactt gaacgagaag aaacccgagc ctgccccgag ctccgcgccg aacatcgcgg
      781 ccgctccgac ggcaccgccg agtatcgtcg ccgccgccgc ggctgccgcc acgccgattt
      841 ccccggtctc gatggctacg gtcgacgccg gcgtgccgct cgatccgaac ctgtccgatc
      901 ccgaccccga caagccctgg tggcagcgcg acaaggacca gatcaaagag cacctgcacg
      961 agatcaagct cgacagcttg agcgccgacg ccgacgacat cctcgccaaa cgcatggtcc
     1021 agggtttctt cgtcgcgatc gatcgcacct ttcgctggaa tgatcgcacc tggtacaaga
     1081 ccaccaagac gctgatcgct cccgccgagc gcttctggca aaccggagcc tcgaaattcc
     1141 agggtgtgga gctcgacggc gagcacttca agctgcccgt tgcgtggggc tacggcggcc
     1201 gcaaacaggt cgcgacttac cagctcgacg aagtgaaaaa gcagctccga cccgccaaat
     1261 ccatcgatcg gcaggtggcc atcgcgctca ctggccgtgc gacggatttg ggcggcacgc
     1321 actacgtcga gacctcggag ggcacctggc tcaaggccaa tcaggtgcgc atcaccgagc
     1381 cggctgaagc gcccgccggg ctcgcccccg acgaacgctg gatcgacgtc gacctttcga
     1441 cgcagacgct cgtcgcgttc gtgggcacgc ggcccgtcta tgcgaccttg atttcgagcg
     1501 gcaaggaatc gaaagacaag gagaaggacc atcgcacccc gacgggtgag tttcgcatcc
     1561 gcgaaaagca cgtcacgacg acgatggacg gcgacggcac cgcggccgga gatctgcctt
     1621 acagcatcga agacgtgccg tacgtcgagt atttctatcg cgcattcgcg ctgcacggcg
     1681 cattttggca cagcaactac ggcgtgcaga tgagccatgg ctgcgtgaat ctctcgccgc
     1741 tcgacgcgaa atggctcttc ttcttcacgt cgcccgagtt tcgcgcaggg tttcacggca
     1801 tgtgggcgcg ccccgaaggc tccggcaccc gcgtaatcat ccacgactga tccgcggctt
     1861 gactcgctgc ccgggcgaga ccagagatgg cggcagatgg accaattctc ggcacacctg
     1921 gaccgcggct gggacctcgt ccagcgcggc gacccgcgtg gggccgagct cagcgcccgg
     1981 cgcgccctcg agctcgacag ccaatcaccc gaggcgcata acctcctcgg ctacgtggcg
     2041 gcgctcaagg gcgagttcga ggacgccatc gacagctatc gccaggcgat cgcgctcgac
     2101 gacacctacc tcgaggcgat gctgaacgcg gcggaagtct acatccaccc gctcggggag
     2161 ttcgacgaag cgattgccat gtgcgaccaa gccctcgagc tcgcggaaac cgacgacgag
     2221 gtcgtagacg cgctgctcct caaattcgac gccctgctcg gcaagggcga aaccgacggt
     2281 gcgcgcgagg tttgcgcgcg atttcccgcc ggacccttcg aaaatccaag ccatctgttt
     2341 ctcgtcggtc gcgcccacta cgaggtcggc gacgccgagc gcgcgttccc gctcgtcgaa
     2401 gaagcggtca agcgcaacgg ccgcaacgcc gaggcctggt attacctcgg gttgattcgg
     2461 gacgaacgcg gcgacacgac gggcgcaacg caggcgttct tgcgctcgcg cgagctcgat
     2521 ctcgaggtgc ccgccccccc gtggtcgctc tcacgcgaga cgttcgagac gacggctcga
     2581 cgcgccatcg acgccctgcc ggagtcgctc aaggtgtacg tgcgcgaagg cgaggtctac
     2641 gtcgccgagg tcccgggcgt cgaggtggtg gtggacggcg tcgatccgcg cgcgctgctc
     2701 ttgctcgacg gcatcaacac cgaggacaag acgctgccgc tcacggcgcg cgtgttcgtc
     2761 taccagcgca acgtcgaacg gcttgccggt tcgatcgagc tcgtggagtc ggaaatcggc
     2821 gccgcgctcg agcgcgaaat cacggcgacg ttcctcgatc ccgagccgga ccactcggtt
     2881 ccccccggac atttgaactg acggcggccg cgccggcggc tccgctcacg ccgcacgtgc
     2941 ggcgagctcg ctcgcgacgc tcgtgagcag cgagcgcgcc ggacacatcg ccacggcttc
     3001 gagcgccgca atggcgcgcg ccgtgtgctc gcgagcgcga cggcgcactt cgtcgcacgc
     3061 accgctctcg cgcacgctct ggctcacgac cgcgacgggc tcctgatca
//
LOCUS       DATIML010000240         2083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3225198, whole genome shotgun sequence.
ACCESSION   DATIML010000240 DATIML010000000
VERSION     DATIML010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3225198"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..784)
                     /locus_tag="VLJ38_04180"
     CDS             complement(122..784)
                     /locus_tag="VLJ38_04180"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU38736.1"
                     /translation="MQPKTLDHIAFWVADREPIARFAEEHLGMHTIAREDKFTLLGSD
                     ARRGKLTLFDAEGPREQGALKHVGLRVSDLTHARAALPEGTPEVFEIGEGIFVTLVEA
                     ATAVEYDLDHVALWSAAPEVTARAYERYGFAPAGDKRVEVGGAYVELHEGDPGEPDRP
                     LLNHLAVLVDSAEDVLSDAGDLGVEVESVVDAANTYAAFLWGPERVRIEYVEHKPTFS
                     LE"
     gene            complement(852..1577)
                     /locus_tag="VLJ38_04185"
     CDS             complement(852..1577)
                     /locus_tag="VLJ38_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38737.1"
                     /translation="MTQEDWSGTGETSTTSSVGSWSEPAIDEIGGFESEKNEESVPAI
                     AARTRSSSRSSSRSSSSRSGSKSSSSRKASSKKKSGAKKKSAAKKKTAAKKTTARKKS
                     TARKSTSAAKKKTAAKKTAARKKTTSRKKTTARKKTTARKKTTARKKTTARKASSTRK
                     KSTTRKASSKKTTARKKSTARKSTGARKASTGRKKATASKKTTARKKTTARKAAPRKA
                     AARKAGGGRKSASRSRTARRSSR"
     gene            complement(1743..>2083)
                     /locus_tag="VLJ38_04190"
     CDS             complement(1743..>2083)
                     /locus_tag="VLJ38_04190"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HSU38738.1"
                     /translation="ASLHSSLTRERSAVRVLGDPAARHVPVSGARGQLVVAPSGDAVL
                     AVALPAPPSGKTYEAWIANGTVQRAGEFDGRTLVVHGHVAHGAKVLVTLERAGGVDAP
                     TSQPLLSARA"
BASE COUNT          273 a          735 c          694 g          381 t
ORIGIN      
        1 gacgagagga gcatcgagcc gcccgcacgt gaacccttct cgcgcagcgt cggtttttga
       61 ccgagctcgc gcaggcgcgc gacggcgacg aggccggcca tgccggcgcc tgccacgagc
      121 attactcgag tgagaacgtc ggcttgtgct cgacgtactc gatccgcacg cgctcaggcc
      181 cccacaggaa cgccgcgtag gtgttcgcgg cgtcgaccac cgactcgacc tcgacgccga
      241 gatcgcccgc gtcggaaagc acgtcctcgg cggagtcgac gagcacggca agatggttca
      301 ggagcggacg gtccggctcg cccgggtcgc cctcgtgcag ctccacgtac gcgccgccga
      361 cctcgacgcg cttgtcgccg gcgggcgcga agccgtatcg ctcgtaggcg cgggcggtca
      421 cctcgggcgc cgccgaccag agcgccacgt ggtcgaggtc gtactcgacc gcggtcgcag
      481 cctcgacgag cgtcacgaag atgccctcgc cgatctcgaa gacctccggc gttccttccg
      541 ggagcgccgc gcgcgcgtgt gtgagatccg agacacgaag gccgacgtgc ttgagcgccc
      601 cttgctcccg cggcccctcg gcgtcgaaga gcgtcagctt cccgcggcgc gcgtcgctcc
      661 cgaggagcgt gaacttgtcc tcgcgcgcga tcgtgtgcat cccgaggtgc tcctccgcga
      721 atcgggcgat cggctcgcgg tcggcgaccc agaaggcgat gtggtcgagc gtcttcggct
      781 gcacgcggca aacgttagcg acgacgcccg ggctccccgc acgctagggg agcccgggcg
      841 tcgaacgcga tctaccgcga gctgcggcgc gccgtccggg agcgggacgc agacttgcgt
      901 ccgccgccgg ccttgcgtgc cgcggccttg cgcggagcgg ccttgcgggc cgtcgtcttc
      961 ttgcgggccg tggtcttctt gctggccgtg gccttcttgc ggcccgtgct cgccttgcgg
     1021 gctcccgtcg acttgcgcgc ggtggacttc ttccgcgcgg tcgtcttctt ggagctcgcc
     1081 ttgcgagtcg tgctcttctt ccgcgtgctc gaagccttcc gggcggtggt cttcttccgc
     1141 gcggtcgtct tcttgcgagc cgtggtcttc ttccgggccg tggtcttctt ccggctcgtc
     1201 gtcttcttgc gagccgcggt cttcttcgca gcggtcttct tctttgccgc cgaagtcgac
     1261 ttgcgagccg tgctcttctt gcgagccgtc gtcttcttcg cggcggtctt cttctttgcc
     1321 gcagacttct tcttggcgcc ggacttcttc ttcgaagaag ccttgcgcga cgacgagctc
     1381 ttggaccccg aacgggagct ggagctgcgg gagctcgagc gtgacgaaga acgggtccgc
     1441 gccgcgatgg cgggaacgct ctcttcgttc ttttcgctct cgaagccgcc gatctcgtcg
     1501 atcgccggtt cgctccacga gccgacgctg gacgtcgttg acgtctcgcc ggtcccgctc
     1561 caatcctctt gggtcatcga tgacctcctg attcggattg cgcgtgcacg attccctacc
     1621 acgtacgttt ctaacgtgca acgcgaacag tcaagttcct ccgcacgttg ctgcaatcga
     1681 aaacgtgcgt cgaagcgcga agtgtgcact accgatcgga caacatgcac gcgtgaacgc
     1741 gcttacgcgc gcgcgctgag caacggctgc gacgtcggag cgtcgacacc gccggcccgc
     1801 tcgagcgtga cgagcacctt cgcaccgtgc gcgacatgcc cgtgcacgac gagcgtgcga
     1861 ccgtcgaact cacccgcgcg ttgcaccgtc ccgttcgcga tccacgcttc gtacgtcttc
     1921 ccactcggcg gcgcgggaag agcgaccgcg agcactgcgt cgcccgacgg ggcgacgacg
     1981 agctgcccgc gcgcgcccga gaccgggacg tggcgcgcgg cagggtcgcc gagcacgcgc
     2041 acggcgctcc gttcgcgcgt gagcgaggag tggagcgacg cgg
//
LOCUS       DATIML010000241         2624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3513707, whole genome shotgun sequence.
ACCESSION   DATIML010000241 DATIML010000000
VERSION     DATIML010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3513707"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VLJ38_04195"
     CDS             <1..754
                     /locus_tag="VLJ38_04195"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSU38739.1"
                     /translation="ADVCGTGGPPLLRPSGLRVGCHSDYGVWDMHGGAWEWTRSAFRR
                     GTTGELVTVRGGNAPAGELVGRCANAIARTADTKAPSIGFRCCSGTSVAPDVELAIRH
                     PRKLEARDRLDSGLVPELVKVLPEEARASLLRHGALAPDRMWSWWPAGNDELVILSLC
                     AGAGRRALCGVLVARVVLGKPNALVWAEGGTWQPMLHAENDPRELWLLGGDDPGAFRR
                     RISYLWGNVRVGPRERRIVNLKEERGTPKRTH"
     gene            complement(910..1338)
                     /locus_tag="VLJ38_04200"
     CDS             complement(910..1338)
                     /locus_tag="VLJ38_04200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38740.1"
                     /translation="MQGRLVPAFVLGLALAASTGCERMAEVKRCRGLAQKVNASLDKI
                     DARSAGEKTRVNYDLIAYEYNFIASTLEGFDGGTPELERAVQDYEALARTSARQSAAL
                     AEALAAKNAASAALATRELERLARQQKAIVARIDEECRPK"
     gene            1445..2539
                     /locus_tag="VLJ38_04205"
     CDS             1445..2539
                     /locus_tag="VLJ38_04205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38741.1"
                     /translation="MRRLAVPVVLGALVAASALACAKRPPAARRVPSAAPALDEPPAA
                     RAIASVLASVHARISLAAPAWELQPLCFGRHLLVRLVKDQVEVIALPELATAFEAPLV
                     GARGVVEIAGGSVVAVGAKLALRLDAGAKAPVRLPVIPWIPGTLLLPERRDSNLLWAV
                     QRAGKQLFRQRLVLDPTRAFDKEITLEGYDGGPLAALRDGALLYRSTDGVRRALPEGR
                     PQSFAPDFAPWRLLPGPRIDEAWAIGEDGRVELWQLAERLLVKARFAAGAPPFSAAAN
                     LDYLALVLVDEPGVAERRFRLRVFQNDGTPALERALPPGPPEIGEDWTEVAVRDRQVA
                     ISETEPLVAVGGPGSLEAFRLPTGERVLTR"
BASE COUNT          343 a          915 c          919 g          447 t
ORIGIN      
        1 tgccgacgtg tgcgggaccg gcggccctcc gttgctacgc ccgagcgggc tgcgcgtggg
       61 ttgccatagt gattacggcg tttgggacat gcacggcggt gcgtgggaat ggacgcgtag
      121 cgcttttcgg cgtggcacca cgggcgagct cgtcacggtg cgcggcggta acgcgcccgc
      181 aggcgagctc gtgggccgct gcgccaacgc catcgcgcgc acggccgaca cgaaagcgcc
      241 gagcatcggc tttcgctgct gctcgggcac gtccgtcgcg ccggacgtcg agctcgccat
      301 tcggcacccg cgcaaactcg aagcgcgcga ccgactcgac agcgggctcg tccccgagct
      361 cgtcaaagta ttgcccgagg aagcgcgcgc ctcgctcctg cggcacggcg cgctcgcgcc
      421 ggaccgcatg tggtcctggt ggcccgccgg caacgacgag ctcgtgattt tgagtctgtg
      481 tgcgggggcg ggacggcgcg ccctttgcgg cgtgctcgtg gcgcgggtcg tgctcggcaa
      541 gccgaacgcg ctcgtttggg ccgagggcgg cacctggcag ccgatgctcc acgccgaaaa
      601 cgatccgcgc gagctctggc tgctcggcgg tgacgacccg ggcgccttcc gacgccgcat
      661 cagctacctc tggggcaacg tgcgcgtcgg tccgcgcgag cggcgcatcg tcaacttgaa
      721 ggaagagcgc ggcacgccga agcggacgca ttgagtcgat ggtgacgggt cctcggaaaa
      781 aaaccgccaa gacgccacgg acgccaagtt ttttttgtat tgatcagcag cgctccgtgc
      841 gatccgttcc agcccgatcc ctctgatttg gcgctcttgg cggcttggcg gttcaaccct
      901 ccggtgctgt cacttcggtc ggcattcttc gtcgatgcgc gcgacgatgg ctttctgttg
      961 gcgcgcgaga cgttcgagct cgcgcgtggc gagcgcggcg ctggccgcgt tcttggcggc
     1021 gagggcttct gcgagcgctg ccgactggcg cgcgctcgtg cgcgcgagcg cttcgtagtc
     1081 ttggacggct cgctcgagct cgggcgtacc gccatcgaag ccttcgagcg tcgaggcgat
     1141 gaagttgtac tcgtacgcga tgaggtcgta gttcacgcga gttttttcgc ccgcgctccg
     1201 cgcgtcgatc ttgtcgagcg aagcgttgac cttttgcgcg agcccgcggc aacgcttcac
     1261 ctcggccatg cgctcgcagc cggtggaggc ggccagcgct aagccgagga cgaacgcggg
     1321 gacgagccga ccttgcacga gcgcgaacgt acaccaagcc gcccgctacc ggcggctgcg
     1381 cgactcggtt tttcgcgcca cggctcgttg cacccaggcg gattgggcta ctttctcgtg
     1441 tctcgtgcga aggctggctg tccccgtcgt cctcggcgcc ctcgtcgccg cctcagcgct
     1501 cgcttgtgcg aagcggcctc ccgcagcgcg gcgcgtccct tcggctgcgc ccgccctgga
     1561 cgagccgccc gccgcccgcg cgatcgccag tgtgctcgcg tcggtgcacg cgcgcatctc
     1621 gcttgcggcg cccgcgtggg agctgcaacc cttgtgcttc ggccggcacc tgctcgtcag
     1681 gctcgtcaaa gatcaggtcg aggtcatcgc gctgccggag ctcgcgacgg cgttcgaagc
     1741 gcccctggtc ggagcacgcg gcgtcgtcga gatcgcgggc ggctcggtcg tcgcggtcgg
     1801 cgccaaactc gcgctgcgtc tcgacgcggg cgccaaagct cccgtccgtt tgccggtcat
     1861 tccctggatc ccgggcacgc tgctcttgcc cgagcgccgc gattcgaacc tgctctgggc
     1921 ggttcagcgc gcgggtaagc aattgttcag gcaacgcctg gtgctcgatc ccacgcgtgc
     1981 cttcgacaaa gaaataacac tggagggtta tgacggcggg cccctcgcgg cgctgcgcga
     2041 cggagcgctc ctctaccgct ccacggacgg cgtgcgccga gcgctgcccg aggggcggcc
     2101 gcagtctttc gcgcccgatt tcgcaccgtg gcgcctgctg ccgggaccgc gcatcgacga
     2161 ggcttgggcg atcggcgaag acggccgcgt cgagctctgg cagctcgctg aacggttgct
     2221 cgtcaaggcg cgcttcgcgg cgggcgcgcc gcccttctcg gccgccgcga acctcgacta
     2281 cctcgcgctc gtcttggtcg acgaaccggg cgtcgccgag cgccgcttcc ggctccgcgt
     2341 tttccaaaac gacgggaccc ccgcgctcga acgcgcgctc ccccccggtc cgcccgaaat
     2401 cggcgaagac tggacggaag tcgccgtacg cgaccggcag gtcgccatct ccgagacgga
     2461 gccgctcgtc gccgtgggtg gaccgggctc gctcgaggcg tttcggctgc cgaccggcga
     2521 gcgagtgctc acgcgctgaa gagtgctcac gcgctgaggt aaggcgccgg ttcgctccgg
     2581 cccgccggca gaacggtgag aagttggccg ttcggcgccc gcgg
//
LOCUS       DATIML010000242         7224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4090234, whole genome shotgun sequence.
ACCESSION   DATIML010000242 DATIML010000000
VERSION     DATIML010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7224
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4090234"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /locus_tag="VLJ38_04210"
     CDS             complement(<1..441)
                     /locus_tag="VLJ38_04210"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HSU38742.1"
                     /translation="MPAIAWWVPLAVSAAWATLMLVLERRFPASPGQRLFRDGFFLDF
                     FWYTLFEGAVLGFVIGALIRCIDDGTHWSRLHLISNWPVGLQLGFFWVTHDFYIYWFH
                     RFQHKNRYFWRTHEAHHSGKDVDWLSGSRSHALEILINQSIEYAP"
     gene            complement(446..1369)
                     /locus_tag="VLJ38_04215"
     CDS             complement(446..1369)
                     /locus_tag="VLJ38_04215"
                     /inference="COORDINATES: protein motif:HMM:NF015087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase family protein"
                     /protein_id="HSU38743.1"
                     /translation="MNLASVRIGNDWIGDGRPTYVVAEIGINHNGSVELAKELIDGAV
                     EAGCNAVKFQKRTPELCVPREQWGILRETPWGVLSYMDYRRKTELGLAEYDEIARHCA
                     ARRMPWFASCWDVESVAFIERFDPPCHKVASACITDLPLLRRLAATNKPIILSTGMST
                     FDEIERAVQTLGQRDLLIAHSTSTYPCPAEELNLRMIHTLKRRFPDCPIGYSGHEPDL
                     VPTWAAVAMGATFVERHITLDRGMWGSDQAASVDVAGFKQLVANIRHVTTALGDGVKR
                     LQPGEIPVRNRLRVARPEREDARRVQADERI"
     gene            complement(1678..1968)
                     /locus_tag="VLJ38_04220"
     CDS             complement(1678..1968)
                     /locus_tag="VLJ38_04220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38744.1"
                     /translation="MLGVSVAWQLFDAAGLTLSEALRAAGDTFFCMLARIVLAWGAFV
                     PAAFFLARSRNAGAVSMMLCLTGYIVLLALTFGARFGSGRWRHIVLVVSENA"
     gene            complement(2050..3021)
                     /locus_tag="VLJ38_04225"
     CDS             complement(2050..3021)
                     /locus_tag="VLJ38_04225"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSU38745.1"
                     /translation="MGNTTLSAVLRLAWPIVLARATQSVIGFTDALMVAPLGQESLAA
                     TTTGGLNAFAFIILPMGTVFIVQSFTAQLRGQGDLVAARRYAYYGLVIALVAALVAAL
                     AAPLLPSALAHFGYAPRLHALLSQNASIRLFSVGGAVGTEALGNYYGGLGRTRPAMVA
                     GVVAMVTNVALNWLLIEPHFGLPGYGVVGSATASVIATWLGFATIAALFTSDGGGAPA
                     GLRAREFWRMLRFGVPNGVNWLLEFSAFTLFVNAGVGHLGTTELAAFNVVLQVNTLSF
                     MPAFGIASAGAILVGENIGRRTLELVWPTVRTTALVAASWMAFVSVW"
     gene            3108..3530
                     /locus_tag="VLJ38_04230"
     CDS             3108..3530
                     /locus_tag="VLJ38_04230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38746.1"
                     /translation="MDSFETECRHLIDGLVRELVALISEVAGDELKRARVARAAAERA
                     AAPRVSARLARALERAEERRRLAAERRAAALAQRPQKSRRAKAATGSTTLTSELVAED
                     QKSEAASPPPLFVHKRTRDGNIQKLERNVDDGAPPPAV"
     gene            3590..4192
                     /locus_tag="VLJ38_04235"
     CDS             3590..4192
                     /locus_tag="VLJ38_04235"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HSU38747.1"
                     /translation="MHRPFQLPPGDFAGFIFDCDGTLADSMPLYHRAWQRALAAQGAS
                     FEFTWELFMSRAGMSTALTVEGLNLEFGTTLESVSIEARHHAEYLALIDEVQPITAIV
                     EVARQYFGKLPLSVASGGARPLVERTLELIGVKELFPVVVVAADVARGKPEPDIFLLA
                     AERMGVPPAACLVFEDGEPGLIAARRAGMKAVLVDHGSRT"
     gene            complement(4197..5822)
                     /gene="ggt"
                     /locus_tag="VLJ38_04240"
     CDS             complement(4197..5822)
                     /gene="ggt"
                     /locus_tag="VLJ38_04240"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSU38748.1"
                     /translation="MPLSGGGVRAVTGTHGIVVSAEPYATRAGVSVLEAGGNAVDAAV
                     ATAFALAVTHPSAGNLGGGGFMLVRPPGGPTVAVDFRETAPSSLTRADFDRMIAAKGT
                     GPVAPGVPGTVAGLLLAERRFGKLPRARVVAPAIALARDGVVLSREEAALILAHWPSL
                     TLDRAARQVFGDARQRALRPGARLVQAALAATLENVATQGEAAFYSGPAAESLVRATA
                     GHITLADLASYRALEREPIRVQYRGYEVETMPPPSAGGLVLAGTLRALEILEPAPPAA
                     EDASSLHLLIELWRRTQALRRFHVLDPDSLDESGRRALLARFLDPAALLAVPIDPAHA
                     TPSERVHSLYAEALRELEHTTHLSVVDASGMVVSLTTTLSASFGAKIMVPATGVLLGN
                     AVASFSSMGDNQPVAGRRTTSSMAPTLVLENGAPRLVLGTPGGDTIPSTLSLLVTRLV
                     DYHEPLDTAVDAPRLHHGFVPDAVRFEAARPLPAELRLALAAKGHRLLRSSLAQGDAS
                     AILIDSGREGAFGYADPREGPGLALAARNIAVP"
     gene            complement(6059..7009)
                     /locus_tag="VLJ38_04245"
     CDS             complement(6059..7009)
                     /locus_tag="VLJ38_04245"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU38749.1"
                     /translation="MTTSFPAGPGDPSGHFVAAEVQRRRAAGERVIVLAPRTSREPSD
                     DPDVHLLPAGDAFGWPGALARLRERPARLLGVVRFVVAARRELARRPGVEHVIAHFVV
                     PCAWPIASGRARLEVVAHGSDVRLIERLPAPLRRLIARSLAGAEVRCVSEELRARLER
                     ALAPLPMARVRVEPMALELGTVETRREARATLGVDVETRLFVIVARLTAEKRVAVALR
                     AAALVPGALAVVVGDGPERARLEREFPGVRFVGRAPRAEALRWIAAADLLLSASILEG
                     APSVVREARALGTRVVALAAGDVRAWSGRDPGLHVLEARG"
BASE COUNT         1287 a         2355 c         2518 g         1064 t
ORIGIN      
        1 cggggcatac tcgatgcttt gattgatgag gatttcgagg gcgtgcgagc gcgagccgct
       61 gagccaatcg acgtctttgc ccgagtggtg tgcctcgtgc gtgcgccaga agtagcggtt
      121 tttgtgttga aagcggtgaa accaatagat gtaaaaatcg tgagtcaccc agaagaaccc
      181 gagctgtaat ccaacgggcc agttcgaaat taggtgtagc cgtgaccaat gcgtcccgtc
      241 gtcgatgcat cggatcaggg caccgatcac gaaccccagc acggctccct cgaagagcgt
      301 gtaccaaaaa aaatcgagga agaagccgtc gcggaacaga cgttgcccgg ggctcgcggg
      361 aaagcgccgc tcgagcacga gcatgagcgt cgcccaggcc gccgagaccg cgaggggaac
      421 ccaccaggcg atggccggca aagcgtcaga ttctttcgtc ggcctgcacg cggcgcgcgt
      481 cttcacgttc gggtcgcgcg acacgcaagc gattcctgac ggggatttca ccgggctgca
      541 ggcgcttgac gccgtcgccg agcgcggtcg tcacgtgccg gatgttggcg accaattgct
      601 tgaaaccggc gacgtcgact gaggcggctt gatccgagcc ccacatcccg cgatcgagcg
      661 tgatgtggcg ctcgacgaag gtcgcgccca tggcgaccgc agcccaggtg ggcacgaggt
      721 ccggctcgtg ccccgagtaa ccgatggggc agtcgggaaa gcggcgcttg agcgtgtgga
      781 tcatgcggag gttcagctcc tcggcagggc acggatacgt ggaggtcgag tgggcgatca
      841 aaagatcccg ctggcccagc gtctgcacgg cgcgctcgat ttcgtcgaac gtggacatcc
      901 ctgtcgagag gatgatgggt ttgttcgtgg ccgcgagccg acgcagcaag ggcaaatccg
      961 tgatgcacgc cgaggcgacc ttgtggcagg gcggatcgaa gcgttcgatg aaggcgacgg
     1021 actcgacgtc ccagcacgac gcgaaccaag gcatgcgacg tgccgcgcag tgccgcgcaa
     1081 tttcgtcgta ctcggcgagc ccgagctcgg tcttgcgccg gtagtccatg taagagagga
     1141 cgccccacgg cgtctcccgc aaaattcccc attgttcgcg cggcacgcag agctccggcg
     1201 tgcgcttctg aaacttgacg gcgttgcagc ccgcctcgac cgcgccgtcg atgagctcct
     1261 tcgcgagctc gaccgagcca ttgtggttga tgcctatttc ggcaacgacg tacgttggac
     1321 ggccgtctcc aatccagtcg ttcccaattc ttacgctggc aagattcatg tctttttctc
     1381 gtcgggtagg cggaccctgg ctgtgacgaa ttgacccttc gcctcggctc tttcgctgct
     1441 tggggcccgc tcggtggtcc gtcaagcaac gctcgtgtca acgagtcatc gaaacgtaga
     1501 actccgtgcg aagtcgtctc gaacgatcac tacttcttcg cggcggaact cgatgtgtcc
     1561 cagcgcgacc tgtggagcct aaaccaattc gttcaagctg aggagcctag acgaactctt
     1621 ccaacacgag ggtgacaccg ctaggacgtt ttggtgccga cgctggtgcg aaatgactca
     1681 ggcgttctcg ctgacgacaa gcacgatgtg ccgccagcga ccggagccga aacgcgcgcc
     1741 gaacgtgagc gcgagcaaca cgatgtagcc agtaagacac agcatcatgc tcactgcgcc
     1801 tgcgttacgc gaacgcgcga gaaagaaagc tgcgggtacg aaggcgcccc acgcgagcac
     1861 gatgcgcgcc agcatgcaga aaaatgtatc acccgcggcg cgtaatgcct cgctcagcgt
     1921 gagccctgcg gcgtcgaaga gctgccacgc gaccgacact cccaacatgg tcgtgccggt
     1981 ctgcaaaagc ccttcgttcg gcgcgccgcg cggttggaac caaccgacga tcagcgccgg
     2041 cgcgatgagt taccagacgc tgacgaacgc catccagctc gcggcgacga gggcggtcgt
     2101 gcgcaccgtc ggccaaacga gctcgagcgt gcggcgaccg atgttctcac ccacgaggat
     2161 ggcgccggcg gacgcgatac cgaacgcggg catgaacgac agcgtgttga cctgcagcac
     2221 gacgttgaac gccgccagct cggtcgtgcc gagatgaccg acaccggcgt tgacgaacaa
     2281 cgtgaacgcc gaaaactcga gtagccaatt gacgccgttc ggtaccccga aacgcagcat
     2341 gcgccagaac tcgcgcgcgc ggagtccggc aggcgcgccg ccgccgtcgc tcgtgaagag
     2401 ggccgcaatc gtcgcgaagc cgagccaggt cgcgatcacg ctcgccgtgg ccgagccgac
     2461 gacgccgtag cccgggaggc cgaagtgcgg ctcgatcaag agccagttca aggcgacgtt
     2521 cgtgaccatc gctaccacgc cggccaccat cgcggggcga gtacgaccga gtccgccgta
     2581 gtagttgccg agcgcctccg tgcccacggc gccgcccacc gaaaatagcc ggattgacgc
     2641 attctgggac agaagcgcgt gcaggcgagg cgcgtacccg aaatgagcca gggcgctcgg
     2701 gagcaacggc gccgccagcg ccgcgacgag tgccgcaacg agtgctatga cgagtccgta
     2761 gtaagcgtaa cgccgagcag ccacgaggtc gccctgacct cggagctgag cggtgaagct
     2821 ttggacgatg aacaccgtgc ccatcggcag gatgatgaac gcgaacgcgt tcagcccacc
     2881 cgtggtggtc gcagccaacg attcttggcc gagcggagcg accatcagcg cgtccgtgaa
     2941 accaatgacc gactgcgtcg cgcgggcgag cacgatgggc caagctagcc ggagcacggc
     3001 ggacaacgtc gtgtttccca ccccaacatg cgattcagtg gtcgcgcctt cggtcacgcg
     3061 gaagcatctt gacgcgcgaa ggcgggccgt gcgagaggca agattcgatg gatagcttcg
     3121 agacggaatg ccgtcatttg attgacggcc tcgtgcgcga gctcgtcgcg ctcatcagcg
     3181 aagtcgccgg cgacgagctc aagcgtgccc gcgtggcgcg tgcagccgcg gagcgagcgg
     3241 ccgcaccgcg cgtgagcgca cgtttggcgc gcgcactcga gcgtgcagag gaacgacgcc
     3301 gactcgcagc ggagcgtcgc gccgcagccc tcgcgcagcg tccgcagaag agccgccgtg
     3361 cgaaagctgc gaccggttcc acaaccctca cgagtgagct cgtcgccgaa gaccagaagt
     3421 ccgaggcggc ctcaccgccg ccgcttttcg tgcacaagcg tacccgcgac ggcaacattc
     3481 agaagctcga gcgcaacgtg gacgacggcg cgcccccgcc tgccgtctaa gccgtgcctg
     3541 ctgcggactc cgagtcggcg tacgcaccac gagttcgctc tatttagtcg tgcaccggcc
     3601 cttccagctt ccccccggcg atttcgccgg tttcatcttc gactgcgacg gcacgctcgc
     3661 cgacagcatg ccgctctacc atcgcgcgtg gcagcgcgcg ctcgcggcgc agggggcaag
     3721 cttcgagttt acctgggagc ttttcatgag ccgcgccggc atgagcaccg cgctcaccgt
     3781 cgagggcttg aacctcgagt tcggaacgac actcgagagc gtgagcatcg aagcgcggca
     3841 ccatgcggaa tacctggcgc tgatcgacga agtgcagccg atcacggcca tcgtcgaggt
     3901 ggcgcggcag tatttcggca agcttccgct gagcgtcgcc tccggtggcg cgcggccgct
     3961 cgtcgagcgg acgctcgagc tcatcggcgt caaagagctg ttccccgtcg tggtcgttgc
     4021 ggcggacgtg gcgcgcggta agccggagcc ggacattttt ctgctcgcgg ccgagcgcat
     4081 gggcgtgccg cccgcagcgt gcctcgtctt cgaggacggg gagccagggc tcatcgcggc
     4141 gcgccgggcg gggatgaaag ccgtgctggt cgaccacggt tcccgcacct gagcgttcag
     4201 gggaccgcga tgtttcgggc tgcgagcgcg agacccggcc cctcgcgcgg gtcggcgtaa
     4261 ccgaacgcgc cttccctgcc gctgtcgatg aggatcgcgc tcgcgtcacc ctgcgcgagg
     4321 gaagagcgaa ggagtctgtg gcctttggct gcgagcgcca ggcgaagctc cgcgggtagc
     4381 ggccgcgccg cttcgaaacg cacggcgtcc ggcacgaagc cgtgatggag gcgtggtgcg
     4441 tcgacggccg tgtcgagtgg ctcgtggtaa tcgaccaggc gcgtcacgag caggctcagc
     4501 gtgctcggga tggtgtcgcc gccgggggtt ccgaggacga gccgtggcgc gccattttcg
     4561 aggacgagcg tcggagccat cgagctcgtc gtccggcgtc cggcgaccgg ttggttgtcg
     4621 cccatgctcg agaacgaagc gactgcgttg ccgagcagca cgcccgttgc cggcaccatg
     4681 attttggcgc cgaacgacgc ggacaacgtg gtcgtgaggg agaccaccat accgctcgcg
     4741 tcgacgacgg agaggtgcgt ggtgtgttcg agctcgcgga gcgcctcggc gtagagcgaa
     4801 tgcacgcgtt cggagggcgt ggcgtgtgcc ggatcgatgg gtacggcgag gagcgccgct
     4861 ggatcgagaa agcgcgcgag gagagcgcgg cgtccggatt cgtcgagcga atccggatcc
     4921 agcacgtgga agcgccggag tgcttgcgtg cggcgccaaa gctcgatcaa aagatgtaac
     4981 gaactcgcat cttccgcggc gggaggcgca ggctccagta tttcgagcgc gcgcagcgtg
     5041 ccggcgagca cgaggccgcc cgcagagggc gggggcatcg tttcgacttc gtacccgcga
     5101 tactggacgc gtatcggctc gcgctcgagc gcgcggtacg aagcaagatc ggcgagggtg
     5161 atgtgaccgg cggtcgcccg caccaggctt tcggcggccg gaccggagta aaacgccgct
     5221 tcgccctgtg tagcgacgtt ctcgagcgtg gcggcgagcg ccgcttgcac cagacgggcg
     5281 ccaggccgga gggcacgctg gcgtgcatcg ccgaacacct gacgcgccgc gcgatcgagc
     5341 gtcaggctcg gccaatgcgc gaggatgagc gccgcttctt cccggctcaa gacgacgccg
     5401 tcgcgcgcaa gagcgatcgc gggtgcgacg acgcgcgcgc gagggagttt gccgaaacgg
     5461 cgttcggcga ggagcagtcc cgcgacggtg ccaggcacgc cgggcgcgac ggggcccgtg
     5521 cccttggcgg cgatcatgcg gtcgaagtcc gcgcgcgtga gggagctcgg cgcggtttcg
     5581 cggaagtcga cggccacggt tgggccgccg ggcgggcgga cgagcatgaa gccgccgccg
     5641 ccgagattac ctgcgctcgg gtgggtcacg gcgagggcga aagccgtggc gacggcggcg
     5701 tcgaccgcgt tgccgcccgc ttcgagcacg ctcactccag cgcgcgttgc gtacggttcg
     5761 gcggaaacga cgatgccgtg cgtgcccgta accgcgcgca cgccgccgcc gctgagcggc
     5821 actcgcgcgg cagccgtgtt ggatgacgcg ggcgtagctt cattccgtac caagtgcgaa
     5881 ggcggtacgg tgggggcaga agggatgggg gaagcagcgg cggccgtgga cgcggagccc
     5941 gcgacgtagg gtcgtgcgct cgccggtaag gcgggcgcaa gcgacacgcc agcgctcgtc
     6001 ggaggttccg cggcgcaccc gagggcgacc accgctgcgg cgaacgcgag cgcgcgtttc
     6061 atccacgtgc ctcgagcacg tgtaagccgg gatctcgccc gctccaggcg cgaacatctc
     6121 cggccgcgag cgcgacgacg cgcgtaccaa gcgctcgcgc ctctcgcacc acggacggcg
     6181 cgccttcgag gatcgaggcg gagagcagca ggtcggccgc ggcgatccag cggagcgcct
     6241 ccgcgcgtgg tgcacgtccg acgaagcgga cgcccggaaa ctcgcgttcg aggcgagctc
     6301 gctcgggacc gtcaccgacg acgacggcga gcgcgccggg aacgagcgcg gccgcgcgca
     6361 acgcgactgc gacgcgcttt tcggcggtca agcgcgcgac gatgacgaag agccgcgtct
     6421 ccacgtccac gccgagcgtc gcgcgagcct cgcggcgcgt ctccacagta ccgagctcga
     6481 gcgccatcgg ttcgacgcgg actcgcgcca taggcagcgg ggcgagcgct cgttcgagcc
     6541 gcgcgcggag ctcctcggaa acgcagcgca cctccgcccc tgcgagtgag cgcgcgatga
     6601 gtcgtcggag cggagctggc agtcgctcga tgagccgcac gtcggagccg tgcgccacga
     6661 cctcgagacg cgcgcgtcca gaagcaatgg gccacgcgca cggcacgacg aaatgggcga
     6721 tgacgtgttc gacaccggga cggcgagcga gctcacgccg ggcggccacg acgaaacgca
     6781 cgacgccgag caggcgcgcg ggtcgctccc gcaagcgagc gagcgcaccc ggccagccga
     6841 aggcgtcccc cgccggcaat aagtgaacgt cgggatcgtc agacggttcg cggctcgtgc
     6901 gcggcgcgag cacgatcacc cgctctcccg ccgcgcggcg ccgttgcact tcggccgcca
     6961 cgaagtgacc gctcggatct cctggtcccg ccggaaaaga cgtcgtcacg accacgcagt
     7021 cgcctggggt tcgcgcggcg accccgctac ggctcatacg cgggggagct ctcccatcgc
     7081 cttcacgccc tcggcacctt gcgcctcgag cagctcgccg agcgcgcgca ggtaacggaa
     7141 ggagtaaatt cccgagttgt gaccgtcgac ccaggtgagg ccgagtgcgt aattgccgac
     7201 ctgctcgagc tcgcgcagct cgag
//
LOCUS       DATIML010000243         1973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_627866, whole genome shotgun sequence.
ACCESSION   DATIML010000243 DATIML010000000
VERSION     DATIML010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627866"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VLJ38_04250"
     CDS             complement(<1..522)
                     /locus_tag="VLJ38_04250"
                     /inference="COORDINATES: protein motif:HMM:NF020076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HSU38750.1"
                     /translation="MGKLLRLLLVCCVWVHGSEGRARAGDSAPPDKTLAPFFVIEHGD
                     PSLDQLPLASTKVDVAIAGVVADVTVTQVYENRGKRALNTRYVFPASTRAAVHGLTMA
                     IRDQVIEAKIQEREQAKQTFEKAKSAGKTATLLEEQRPNVFTMNLANVMPGDRIEVTL
                     KYNELLVPTEGSYD"
     gene            complement(754..1509)
                     /locus_tag="VLJ38_04255"
     CDS             complement(754..1509)
                     /locus_tag="VLJ38_04255"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HSU38751.1"
                     /translation="MQSHAQRIRKRRLENPESCFICGKRGHFPELVRAALVRPDVAEH
                     IAKARGITWQPDGRVCQACLGAGRTERLLVRLEQERGRLSDLDQQVARRIAQHESVVM
                     DDDEDLDSPKTLGERVADGVARWGGSWPFVLGFLGMLLVWTAANSLLLHNRGFDPYPY
                     ILLNLVLSCVAALQAPVIMMSQNRAETRDRRRAESDYRINLKAEIEIAGLHDKLDHVL
                     HTQYEELIELQEAELELLEQLVASQRETQQHAK"
     gene            1536..>1973
                     /locus_tag="VLJ38_04260"
     CDS             1536..>1973
                     /locus_tag="VLJ38_04260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38752.1"
                     /translation="MRFWKHDWLLLGVLLSLPGCEKEHHEKPAEPAASVDKTAAIDPA
                     LAKAVAAASSRVASGAAPAGSGEPPPNGIFAPGAADAEIKAGTPPKITLGGTGSEPRV
                     ALTPAQPKPGWKTQGTLELQVASDPQQGPLPVSFAVTVEAQKPK"
BASE COUNT          303 a          651 c          677 g          342 t
ORIGIN      
        1 gtcgtagctg ccctcggtcg ggacgagcag ctcgttgtac ttgagcgtga cttcgatgcg
       61 gtcaccgggc atgacgttcg cgaggttcat cgtgaagacg ttcgggcgtt gctcttcgag
      121 caacgtggcc gtcttgccgg cgctctttgc tttctcgaag gtctgcttgg cttgttcgcg
      181 ctcctggatt tttgcttcga tgacttgatc gcggatcgcc atcgtcaggc cgtggacggc
      241 ggcgcgcgtc gaggctggga agacgtaacg cgtgttgagc gcgcgtttgc cgcggttttc
      301 atagacttga gtgaccgtga cgtcggccac gacgccggct atcgcaacgt ccactttcgt
      361 cgaggcgagc ggcagctggt ccagactggg atcgccgtgc tcgatcacga agaagggcgc
      421 gagggtcttg tcgggcggcg cgctgtcgcc ggcgcgcgct ctgccctccg agccgtgaac
      481 ccagacgcag caaaccaaga gcagtcgaag caactttccc acgatgacgg gacaatcctt
      541 tcgccgcggc gggcggcggc tccgttcact gcaaccgccg tgcacggtgg cagcgcgcgg
      601 cgccccagcg tgaaatggct cgaatcggtg ggcaacggcg cgtacccccc aaaccttccc
      661 ccaaaaaagg cgtggctccc cgtccacgcc gcgcgtcggc ggcgccacgc cgcgtgcgtg
      721 cgtcgccggt cgacagcgcg ctcggcctac gcgttacttg gcgtgctgct gcgtctcgcg
      781 ctgggacgcc acgagctgtt cgagcagctc gagctcggct tcctgtaact cgatcagctc
      841 ttcgtattgc gtgtggagca cgtggtcgag cttgtcgtga aggcccgcga tctcgatttc
      901 tgccttcaag ttgatgcggt agtcgctctc ggcgcgccgc cggtcgcgcg tctcggctcg
      961 gttttgcgac atcatgatca cgggcgcctg cagggccgcc acgcacgaga gcacgaggtt
     1021 caagaggatg tacgggtagg gatcgaaacc gcgattgtgg aggagcaagc tgttggcggc
     1081 cgtccagacg agcaacatcc cgaggaagcc gagcacgaag ggccacgagc caccccagcg
     1141 ggcgacgccg tcggcgacgc gctcgccgag ggtcttcggg ctgtcgaggt cttcgtcgtc
     1201 gtccatgacg acgctctcgt gttgggcgat acggcgcgca acttgctggt ccaggtcact
     1261 caggcgcccg cgctcctgct cgaggcgcac gagcagccgt tcggtgcggc cggcgcccag
     1321 acaggcttgg cacacccgac cgtccggttg ccaggtgatg ccgcgcgcct tggcgatgtg
     1381 ctcggcgacg tcgggccgga cgagggcagc gcggacgagc tcggggaaat ggccgcgctt
     1441 gccgcagatg aagcagctct ccgggttctc gagccgtcgc tttctgattc gctgggcgtg
     1501 ggactgcatc cggatatggt agatccggcc ccgcaatgcg tttttggaaa cacgattggc
     1561 tgctgctcgg cgtgttgctc tcgctgccgg gctgcgagaa ggagcaccac gaaaaaccgg
     1621 cggaacccgc tgccagcgtc gataagaccg cggcgatcga tcccgccctc gccaaagcgg
     1681 tcgcggccgc aagctcgcgc gtcgcgtccg gtgccgcgcc ggccggctcg ggggaacccc
     1741 cgccgaacgg catcttcgcg ccgggcgccg ccgacgccga gatcaaggcc ggcacgccgc
     1801 cgaagatcac gctcggcggt accggcagcg agccgcgcgt cgcgctcacg cccgcgcaac
     1861 cgaagcccgg ctggaagaca cagggcacgc tcgagctgca ggtcgcctcc gatccgcaac
     1921 agggcccgct cccggtctcg tttgccgtga ccgtcgaagc gcagaagccg aag
//
LOCUS       DATIML010000244         4874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_914829, whole genome shotgun sequence.
ACCESSION   DATIML010000244 DATIML010000000
VERSION     DATIML010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4874
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914829"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VLJ38_04265"
     CDS             <1..297
                     /locus_tag="VLJ38_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38753.1"
                     /translation="IRVRMGVLQYVLNGPEMHRWHHACEERREYNFATKIALWDFLFG
                     TAYRPGRAPERFGLWGDPPFPKGYFAQHVWAFRPLPALGPKAAPAGARPPGIAA"
     gene            294..1319
                     /locus_tag="VLJ38_04270"
     CDS             294..1319
                     /locus_tag="VLJ38_04270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38754.1"
                     /translation="MTRALFVCGSLNQTRQLHAVARELPEFTAAFSPFYNDFAVELMR
                     RAGLLEKTIGGKRRQGFCLEYLTREGLALDVGGRAGPYELVVTCTDLVVQSNLRNQPL
                     VVVQEGIFDPDGFMASACRRLRFLPRWFAGTALTGESGLYDRFCAASDGYRERLLARG
                     VSAERVIVTGIPGFDDCRTYLQNDFPHYGYVLVCTSDTRETLKFDNRRLLIERALEIA
                     AGRQLIFKLHPNENEQRSRRELERHAPNALVYQQGSAEEMIANCDVLITQWSSTVFVG
                     MALGKEVYSNFAQAELERLLPWQNGGTSAARIAEVCRALLASTKQCKHARQQRIRSRA
                     ASEAGAP"
     gene            1316..2131
                     /locus_tag="VLJ38_04275"
     CDS             1316..2131
                     /locus_tag="VLJ38_04275"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family protein"
                     /protein_id="HSU38755.1"
                     /translation="MILLVVVQARTGSTRLPGKVLLPLAGKPLLGRMLERLRAAKTPF
                     ELMVATTTDPSDDPVAETAAAFETRVYRGHPTDLLERHLGAARLAGADVVVKIPSDCP
                     LIAPEVVDHVLGAWLERGVAERLDYLGNLHPPTHPDGNDVEVMPLAALELAWREATRP
                     FEREHTTPFLWDQPERFRLANVAWETGLDYSKTHRFTIDYPEDYALIRTVYDELCTAE
                     RPVFSLADILELVRARPDILALNARYHGTSWVQKHAAELRTRAALGLYPGVSA"
     gene            2128..2982
                     /locus_tag="VLJ38_04280"
     CDS             2128..2982
                     /locus_tag="VLJ38_04280"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HSU38756.1"
                     /translation="MSTSHAELERLALRVREHVIRLATGGGCFIGASLSCTDLIVHLY
                     QRVLRVTPASVRDPNRDYLLLSKGHDVPALYGTLVELGFMARERLSLHLSTEDSIYWH
                     PNRAVPGVEFHSGSLGHLLSVGIGLALDAKLRRAENRVFVLLGDGELDEGTIWEGLLV
                     AAAKQLDNLVCIVDRNEFQANVRTEELTPLEPLVDKFEAFGAKALRVDGHSFTALDTA
                     FATLPLAAGRPSVIVADTVRGRGLPSIERRADRWFANFSHDEVEALLAELHGAAPATL
                     HSETLVVR"
     gene            2979..3893
                     /locus_tag="VLJ38_04285"
     CDS             2979..3893
                     /locus_tag="VLJ38_04285"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSU38757.1"
                     /translation="MKTYEETLYELALADERILVLTAENRAAIRGLPEKLGARCIDVG
                     IAEQTMIGAAAGLALAGRVPVCHSLATFLTLRAFEFVRTDVGIARLPVKLVGGVPGFL
                     SDGNGPTHQALEDISLMRGIPNMQVFCPADQAELVAMLPAILQSPDPAYVRYNASKPV
                     VEHAPFAVGQAETFGEGTDVALLTFGFLLEHVKRAAELLEARGVGVRLVNLRTLKPID
                     ERAVVRAARDARLLVTIEDHFRTGGLYSIVAETLLAQRLTAKTLPIALEERWFRPATL
                     PRVLEHEGFTGEKLAARVFWALEEQARR"
     gene            3909..>4874
                     /locus_tag="VLJ38_04290"
     CDS             3909..>4874
                     /locus_tag="VLJ38_04290"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSU38758.1"
                     /translation="MSEFPNISESNRWYARAAGLIPAGTQTLAKGAGQYVNGVAPKFA
                     ARGVGSHLWDVDGNEYVDLQMGIGPLSLGYCYEAVDRAIVEQLSRGITFSLVHPLEVE
                     VAELVQKVVPNAEMVRYSKTGCDVTSAAVRLARAHTGRNKVLACGYHGWHDWYVAVTD
                     RNRGVPEATRDLTYTFDYNDLAGLERSLDADTACVILEPVVFVAPKDGFLHEVRKLCD
                     ARGALLVFDEMWTGFRLALGGAQEKFDVRADLACFSKACANGMPLSMLTGRRDVMRLL
                     DKDVFFFTTFGGEALSLAAARATITEMLDKDVIGHLARQGRRLRDG"
BASE COUNT          786 a         1679 c         1572 g          837 t
ORIGIN      
        1 attcgtgttc gcatgggtgt attgcaatac gtgctgaacg ggccggaaat gcaccgctgg
       61 catcacgctt gtgaggaacg gcgcgagtat aacttcgcga cgaaaatcgc actctgggac
      121 tttctgttcg gcacggcgta ccgaccggga cgcgcgcccg agcgttttgg tctttggggt
      181 gatcccccgt ttcccaaggg ctacttcgcg caacacgtgt gggcgtttcg gccgctgccg
      241 gcactcggac caaaggccgc gcccgccggt gcgcggccgc cgggaatcgc cgcatgacgc
      301 gcgcactctt cgtctgcggg tcgctgaacc agacgcggca gcttcacgcc gtcgcgcgcg
      361 agctcccgga gtttacggcc gcgttttcac cgttctacaa cgattttgcc gtcgagctca
      421 tgcgccgcgc gggcctgctg gaaaagacca tcgggggcaa gcgtcgacag ggcttttgcc
      481 tcgagtacct cacgcgcgag ggcctcgcgc tcgacgtggg cggacgcgcg gggccgtacg
      541 agctcgtggt cacgtgtacc gacctcgtcg tgcagagcaa cttgcgcaac cagccgctcg
      601 tcgtcgtcca agagggcatc ttcgatcccg acggcttcat ggcgagcgcg tgccgcaggc
      661 tccgattttt gccgcgctgg ttcgcgggca cggcgctcac aggtgaaagc ggcttgtacg
      721 accgtttctg cgcggcgagc gacggctatc gcgagcgact gctcgcacgc ggggtctctg
      781 ccgaacgggt gatcgtcacg ggcatacccg gtttcgacga ctgccgcact taccttcaaa
      841 acgacttccc gcattacggc tacgtgctcg tgtgcacctc cgacacccgt gaaacgctga
      901 agttcgacaa tcgccggctg ctcatcgagc gcgccctgga aatcgccgca ggacggcagc
      961 tcattttcaa actgcacccg aacgagaatg agcaacggag ccgccgtgag ctcgaacgtc
     1021 atgctccgaa cgcgctcgtc tatcagcagg gcagcgccga agagatgatc gccaactgtg
     1081 acgtgctcat cacgcagtgg tcgagcacgg tcttcgtcgg catggcgctc ggcaaagagg
     1141 tctactcgaa tttcgcgcag gccgagctcg aacgcctcct gccttggcag aacggcggca
     1201 cttcggcggc tcgcatcgct gaggtctgtc gcgcgctctt ggcgagcacg aagcagtgca
     1261 agcacgcgcg gcagcaacgg atccgctcgc gggcggcgag cgaggcgggg gctccgtgat
     1321 tctcctcgtc gtcgttcagg cccgcacggg ttcgacgcgc ttgccgggca aggtgctgct
     1381 cccgcttgcg ggcaagccgc tgctcggccg catgctcgaa cgcttacgcg ccgcaaagac
     1441 gccgttcgag ctcatggtgg cgacgacgac cgatccgagc gacgaccccg tggccgaaac
     1501 ggcggcggct ttcgagacgc gcgtttatcg cgggcacccg acggatctct tggagcggca
     1561 cctcggcgcc gcgcggctcg cgggcgccga cgtcgtcgtg aaaatcccgt cggactgccc
     1621 gctgatcgcg cccgaagtcg ttgaccacgt gctcggcgcc tggctcgaac gcggcgtcgc
     1681 cgagcggctc gattatctcg gcaatctgca cccgcccacg caccccgacg gcaacgacgt
     1741 cgaagtgatg ccgctcgcgg ctctcgagct cgcttggcgc gaagccacgc gtccgttcga
     1801 gcgcgagcac acgacgccgt ttctctggga ccagccggag cgcttccggc tcgcgaacgt
     1861 cgcgtgggaa acgggcctcg actactcgaa gacgcaccgt ttcaccatcg attatcccga
     1921 agattacgca ctgattcgca cggtttacga cgagctttgc accgccgagc gccccgtctt
     1981 ctcgctcgcc gacatcctcg agctcgtccg ggcacgcccc gacatcttgg cgctgaacgc
     2041 ccgttatcac ggcaccagct gggtccagaa acacgccgcc gagttacgta cccgcgccgc
     2101 gctcggcctt tatccaggag tttccgcatg agcacttccc acgccgagct cgaacgcttg
     2161 gccttgcgcg tgcgagagca cgtcatccgc ctcgccaccg gcggtggctg cttcatcggc
     2221 gcgtccctct cctgcacgga cctcatcgtg cacctttatc agcgagtctt gcgcgtgacg
     2281 cccgccagcg tccgcgaccc gaaccgcgac tatctccttc tgtccaaagg ccacgacgtg
     2341 ccggcacttt acggcaccct cgtcgagctc ggcttcatgg cgcgcgagcg gctgtccttg
     2401 cacctcagca ccgaggattc catttactgg catcccaatc gcgccgtgcc gggcgtcgaa
     2461 tttcactcgg gctcgctcgg ccatctcctg agcgtcggca tcgggctcgc cctcgacgcc
     2521 aagctccggc gagccgaaaa ccgcgtcttc gtgctactcg gcgacggcga gctcgacgag
     2581 ggcacgattt gggagggctt gctcgtcgct gccgccaaac agctcgacaa tctcgtgtgc
     2641 atcgtcgatc gcaacgaatt tcaagcgaac gtccgcaccg aggagctgac gccgctcgag
     2701 ccgttggtcg ataaattcga agcgttcggc gcgaaggcgc tgcgcgtcga cggccattcg
     2761 ttcacggcgc tcgacacggc gttcgcgacg ctgcccctcg ccgcaggccg accgagcgtc
     2821 atcgtcgccg acacggtacg tgggcgcggg ctgccgagca tcgagcgacg cgccgaccgc
     2881 tggtttgcaa acttctcgca cgacgaggtc gaagcgctgc tcgccgagct ccacggcgcc
     2941 gccccagcga cgctccactc cgaaacgctg gtggtgcgat gaagacgtac gaagagacct
     3001 tgtacgagct cgcgctcgcc gacgaacgca tcctggtgct gacggccgaa aatcgcgccg
     3061 ccatccgcgg cttgcccgaa aagctcggcg cgcgctgcat cgacgtgggc atcgccgagc
     3121 agaccatgat cggcgcggcg gcggggctag cgctcgcggg tcgcgtcccg gtctgtcaca
     3181 gcctcgcgac gttcctgacg ctcagggcgt tcgagttcgt gcgcacggac gtgggtattg
     3241 cgcgcctgcc ggtcaaactc gtgggtggcg tgcccgggtt cctctcggac ggcaacggcc
     3301 cgacgcatca ggcgctcgag gacatttcgc tcatgcgcgg cattccgaac atgcaagtgt
     3361 tctgcccggc ggaccaggcg gagctcgtgg cgatgctgcc ggccatcttg cagagcccgg
     3421 accccgcgta cgttcgttac aacgcgtcca agcccgtcgt cgaacacgcg cccttcgctg
     3481 tcggccaggc ggagactttc ggagagggga cggacgtagc gctcctcacg ttcggcttct
     3541 tgctcgagca cgtcaagcgc gccgcggagc tgctggaagc gcgcggcgtg ggcgtgcggc
     3601 tcgtgaatct gcggacgctg aagcccatcg acgagcgcgc cgtcgtgcgc gccgcccgcg
     3661 acgcgcgcct gctcgtcacg atcgaagatc acttccgcac gggcggcctc tactcgatcg
     3721 tcgccgagac gctgctcgcg cagcggctca cggccaagac gttgcccatc gcgctcgagg
     3781 agcgctggtt ccgcccggcc accctgccgc gcgtgctcga acacgagggc ttcacgggcg
     3841 aaaagctggc cgcacgcgtg ttttgggcgc tcgaggagca agcgcggcgc tgagcgcacg
     3901 aggtcaagat gagcgagttt ccgaacatct ccgaatcgaa tcgctggtac gcgcgcgccg
     3961 cggggctgat tcccgccggc acgcagacgc tcgccaaggg cgcaggtcaa tacgtgaacg
     4021 gcgtcgcgcc gaagtttgcg gcgcgcggcg tcgggtcgca cctctgggac gtcgacggca
     4081 atgaatacgt cgatctgcag atgggcatcg ggccgctctc gctcggctac tgctacgaag
     4141 cggtcgaccg cgccatcgtc gagcagttgt cgcgcggcat tacgttctcc ctcgtgcacc
     4201 cgctcgaggt ggaagtggcc gagctcgtgc aaaaggtcgt accgaacgcc gagatggtgc
     4261 gttacagcaa gacgggctgc gacgtgacga gcgcggccgt gcgcctcgcc cgcgcgcaca
     4321 cgggccgcaa taaagtgctc gcctgcggct atcacggctg gcacgactgg tacgtcgccg
     4381 tcacggatcg caaccgtggc gtccccgagg cgacgcgcga cctcacctac acgttcgact
     4441 acaacgatct cgccgggctc gagcggtcgc tcgacgccga cacggcgtgc gtcatcctcg
     4501 agccggtcgt cttcgtcgcc ccgaaagacg gctttttgca cgaagtcaga aagctctgcg
     4561 acgcccgcgg cgccctcctc gtgttcgacg aaatgtggac gggctttcga ctcgcgctcg
     4621 gtggcgctca ggaaaagttc gacgtgcgcg cggatctcgc ctgcttttcg aaggcgtgcg
     4681 ccaacggcat gccgctctcg atgctgacgg gacggcgcga cgtgatgcgc ttgctcgaca
     4741 aagacgtctt cttcttcacg accttcggcg gggaggcgct gtcgctcgcc gccgcgcgcg
     4801 ccaccatcac ggagatgctc gacaaggacg tgatcggcca cctggcacgc cagggccggc
     4861 gcctgcgcga cggc
//
LOCUS       DATIML010000245         4666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1492554, whole genome shotgun sequence.
ACCESSION   DATIML010000245 DATIML010000000
VERSION     DATIML010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4666
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492554"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2089)
                     /locus_tag="VLJ38_04295"
     CDS             complement(<1..2089)
                     /locus_tag="VLJ38_04295"
                     /inference="COORDINATES: protein motif:HMM:TIGR00914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HSU38759.1"
                     /translation="MNGAGGENGAPKQGLIARLIAASAHRPWFTLLGVAALAAWGFVA
                     LSRAPLDAIPDLSDVQVIVFTEWMGQSPDLVEDQVTYPISAALVAAPKVQAVRGQSMF
                     GMSFVNVIFDEGTDIYWARSRVLEAMSSVRGKLPQGINPILGPDATGVGWVFEYALVD
                     KSGKHDLQQLRSLQDWNLRYALESVPGVAEVASVGGYVKQYQVNVDPNKLLGRGVTME
                     DVVRAVRASNQEVGGRVIEIAGHEQVIRGRGYVKSPDDIGQAPIKVTNGTPIRVRDVA
                     EVSLGPDIRRGLSELNGEGEAPGGIVIMRYGENAVNVIEGVKQRLHELEKALPDGVKV
                     VTTYDRSELIEDAVHTLEHTLVEEMLVVSLVIFVFLLHARSALIPILTLPVGVLLAFI
                     PMLEQHLTANIMSLGGIAVAIGAMVDASIIIIENIHKKLSEWEHHGRPTPRAEAIIAA
                     MQEVGPSLFFSLLVITISFLPVFTLEATEGRMFKPLAFTKTYAIGFAAVLAVTLTPAL
                     AVLLIRGRVHDESKNPLNRWLTAAYAPVVRFVVEHRFKVITLAVLAIVLTLPAVFRLG
                     SEFMPPLNEGVILYMPTAPPGMSENEASVLLQAMDRELKKFPEVVSVFGKEGRAETAT
                     DPAPLGMAEVTVVLKPREQWPPGLGWDELIRQMDEKLHFPGMPNIWWMPIQTRTEMLA
                     TGVRSPLGIEVFGD"
     gene            complement(2089..3396)
                     /locus_tag="VLJ38_04300"
     CDS             complement(2089..3396)
                     /locus_tag="VLJ38_04300"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU38760.1"
                     /translation="MTDPLPPRKGAHFLGTAVFIAALVVLGVVFRNELRLWFAGKNPT
                     ATRSEPTAAASARPPAGTPAIDHYTCPMHPSVNEKKSGKCPICGMELVPVTAEQHDQG
                     VVMVDDARRQLIGVRVGSVVEAPLRQTFRAVGRVTYDESSLTDVTLKVRGWITKLFVS
                     RTGQRVSKGQPLFQVFSPELFSAEQDFLLASHAGVTTPAGAGTQPNQSEVLARAARQR
                     LELLGLGDAEIEQLKQRGTPSESIAFPSPAGGFVIEKDVVEGASVDAGMRLYRIAKLD
                     KVWVEADVYESDLAQVHVGQTATVTLDYLPGHSYEAKVAYVYPFLDPAARTGRVRLEL
                     ANKSLELRPGMFASVILAANAEPRVQVPASAVVYTGPRRLVFLELGEGRFRPQEVRVG
                     NEAGGMYEVLDGLKAGDRVATSGVFLLAAEARISTATKYWDAP"
     gene            complement(3393..>4666)
                     /locus_tag="VLJ38_04305"
     CDS             complement(3393..>4666)
                     /locus_tag="VLJ38_04305"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU38761.1"
                     /translation="DTSRPAPHAEQDVLDTSSELPANEGRVLERTAFVREVLRRNPSI
                     ESAQSGFRAALARTREEGSFEDPMVDVAIAPLSIGSKQAPFGYEIGVSQKLPWFGKRG
                     FEQAAASAEAAAAKADYEAVERELAVSAVMLYDQYFVTTRSLAINAQHIALMQSMQSA
                     AAAQFASGRGSVQDALQAEAELTHLEHDAVMLATERDVTVAQMNELLHRAPELPLPAP
                     VAELPVPAVPDAPSTELEGEAVEHRPDIVAVRERARAEAARGERADREGYPDFTLSTS
                     YNSMWDMPQHRWMVGLGLNVPIQRGRRAGAADEARAMHAQFEHDAARLSDAARTQVFV
                     SLKQLTESRHVLALYEKRLLPVAQQQIDAARAGFSTSQNPFVSVVDAERNLRRVELDY
                     QAERAAYGVRRAELDRALGRIPTLDWKEALP"
BASE COUNT          741 a         1563 c         1552 g          810 t
ORIGIN      
        1 cgtcgccgaa gacctcgatg ccgagcgggc tgcgcacgcc cgtcgcgagc atttcggtgc
       61 gcgtctggat cggcatccac cagatgttcg gcatgcccgg gaaatggagc ttctcgtcca
      121 tttgccggat cagctcgtcc cagccgagcc cgggtggcca ctgctcgcgc ggcttgagca
      181 ccaccgtgac ctcggccatg ccgagcggtg cgggatcggt cgccgtttcg gctctgccct
      241 ctttgccgaa gacactcacg acctcgggga atttcttgag ctcgcggtcc atcgcctgca
      301 gtaagaccga ggcttcgttt tccgacatgc ccggcggcgc cgtcggcatg tagaggatca
      361 cgccctcgtt cagcggcggc atgaactcgc tgcccaagcg aaagacggcc ggcagcgtga
      421 gcacgatcgc gagcacggcg agggtgatga ccttgaaacg gtgctcgacc acgaagcgca
      481 cgaccggcgc gtacgccgcc gtgagccagc gattcagcgg gtttttgctc tcgtcgtgca
      541 ctcggccgcg aatcaagagc acggcgagcg ccggcgtgag cgtgacggcg agcacggcgg
      601 cgaagccgat ggcgtacgtc ttggtgaacg cgaggggctt gaacatgcgg ccctcggtgg
      661 cttcgagcgt gaagaccggc aagaacgaaa tcgtgatcac gagcagcgag aagaagagcg
      721 acgggccgac ctcttgcatc gcggcgatga tcgcttccgc gcgcggtgtg ggccggccgt
      781 gatgctccca ctcggacaac ttcttatgaa tgttttcgat gatgatgatc gacgcatcga
      841 ccatcgcgcc gatcgcgacg gcgatgccgc cgagcgacat gatgttcgcg gtcaagtgtt
      901 gctcgagcat cggaatgaac gcgagcaaga cgccgaccgg cagcgtcaaa atcgggatga
      961 gcgcgctccg cgcgtgcaaa aggaacacga agatgaccag gctcacgacg agcatctctt
     1021 cgacgagcgt gtgctcgagg gtgtgcacgg cgtcctcgat gagttcggag cggtcgtagg
     1081 tcgtgacgac cttcacgccg tccggcagtg ccttttcgag ctcgtgcagc cgctgcttca
     1141 cgccctcgat gacgttcacg gcgttttcgc cgtagcgcat gatcacgatg ccgcccggcg
     1201 cctcgccctc gccgttcagc tccgagagcc cgcgccggat gtcgggcccg agactcacct
     1261 ccgcgacgtc tcggacgcga atgggcgtgc cgttcgtcac cttgatcggc gcctgcccga
     1321 tatcgtcggg gctcttcacg tagccgcggc ctcgaatcac ctgctcgtgc cccgcgattt
     1381 cgatcacgcg cccgccgacc tcctggttcg acgcgcgtac ggcgcgcacg acgtcttcca
     1441 tcgtgacgcc gcgaccgagc agcttattcg ggtcgacgtt gacctggtac tgcttgacgt
     1501 acccgccgac gctcgccacc tcggccacgc ccggcacgct ttcgagcgcg tagcggagat
     1561 tccaatcctg tagcgagcgg agctgttgca agtcgtgctt gccgctcttg tcgacgagcg
     1621 cgtattcgaa tacccagccg accccggtcg cgtcggggcc gaggatggga ttgatgccct
     1681 gcggcaattt cccgcgtacc gagctcatcg cctcgagcac gcggctgcgc gcccaataga
     1741 tgtccgtgcc ttcgtcgaag atgacgttga cgaacgacat gccgaacatc gactgaccgc
     1801 gtacggcctg gactttgggc gcggcgacga gcgccgccga aatcggatag gtgacctgat
     1861 cttcgacgag atcggggctc tgtcccatcc actcggtgaa gacgatcacc tggacgtcgg
     1921 agaggtccgg gatcgcgtcc agcggtgcgc gactgagcgc cacgaagccc caggccgcca
     1981 gcgcagcgac gccgagcagc gtgaaccacg gccggtgcgc gctcgccgcg atgagtcgcg
     2041 cgatcaagcc ctgcttcgga gcgccgttct cgccccctgc gccgttcatc acggtgcgtc
     2101 ccagtacttg gtggcggtgc tgatgcgcgc ctcggccgcg agcaagaaga cacccgacgt
     2161 ggcgacacga tcgcccgctt tgaggccgtc gagcacctcg tacatgccgc ccgcctcgtt
     2221 acccacgcgc acttcttgcg ggcgaaagcg cccttccccg agctcgagga acacgagacg
     2281 ccgcggaccg gtgtacacga ccgcggacgc gggcacctgg acgcgcggtt ccgcgttcgc
     2341 cgcgaggatc acgctcgcga acatgcctgg ccggagctcg agcgacttgt tcgcgagctc
     2401 gaggcggaca cgcccggttc tcgccgcggg atcgagaaac ggatagacgt acgcgacctt
     2461 cgcctcgtag ctgtggcccg gtagatagtc gagcgtgacg gtcgcggtct gtccgacgtg
     2521 gacctgcgcg agatcggact cgtagacgtc tgcctcgacc caaaccttgt cgagcttggc
     2581 gatgcggtaa agccgcatgc cggcgtcgac cgaagcgcct tccacgacgt ccttttcgat
     2641 cacgaagccg cccgcgggcg acgggaacgc gatgctctcc gaaggtgtgc cgcgctgctt
     2701 cagctgctcg atttctgcgt ctccgaggcc caagagttcg agccgttgcc gcgcggcgcg
     2761 cgccagcact tcgctctgat tcggctgcgt tcccgctcca gccggcgtcg tcaccccggc
     2821 atgcgacgcg agcaggaagt cttgctccgc gctgaagagc tcggggctga acacctgaaa
     2881 gagcggttgc cccttgctca cccgctgtcc ggtccgactc acgaacagct tggtgatcca
     2941 gccgcgcacc ttgagcgtca cgtcggtgag gctcgactcg tcataggtga cgcggccgac
     3001 cgcacggaag gtttgccgga gcggcgcttc caccacgctc cccacccgca cgccgatgag
     3061 ctgccgccgg gcgtcgtcga ccatcacgac gccttggtcg tgctgctctg ccgtgacggg
     3121 gacgagctcc atcccgcaaa tcgggcactt gcccgacttc ttctcgttga ccgacgggtg
     3181 catgggacac gtgtagtggt cgatggccgg ggtgccggcg ggcgggcgcg cggacgccgc
     3241 tgcggtcggc tcgctgcgcg tggcagtcgg atttttgcca gcgaaccaga gcctgagctc
     3301 gttccgaaag acgacgccta gaacgaccag cgccgcaatg aagacggctg ttccgagaaa
     3361 gtgggcgcct ttgcgcgggg gcagtgggtc ggtcatggca atgcttcttt ccaatcgagg
     3421 gtcggaatgc gcccgagcgc gcggtcgagc tccgcgcggc gcacaccgta ggcggcccgc
     3481 tcggcttggt agtcgagctc gacgcgccgc aggtttcgct cggcgtcgac gaccgaaacg
     3541 aacggatttt gcgaggtcga aaagccggcg cgcgcggcgt cgatctgttg ctgcgccacg
     3601 ggcaagagcc gcttctcgta aagtgcgagg acgtgccgcg actcggtgag ttgcttgagc
     3661 gagacgaaga cttgcgtgcg cgccgcgtcc gagagccgcg cggcgtcgtg ttcgaactgc
     3721 gcgtgcatgg cgcgcgcttc gtcggccgca ccggcgcgcc gaccacgctg aatcggcacg
     3781 ttgagcccga gtcccaccat ccagcggtgt tggggcatgt cccacatcga gttgtacgag
     3841 gtcgagagtg tgaagtcggg atagccctca cggtcggcgc gttcgccgcg cgcggcttca
     3901 gcgcgcgccc gctcccggac cgcgacgata tctggtcggt gctccacggc ctcgccttcg
     3961 agctcggtgc tcggcgcgtc cgggacggcg ggaacgggca gctcggcgac gggcgccggc
     4021 agcgggagct ctggtgcgcg atgcaagagc tcgttcattt gcgccaccgt cacgtcgcgc
     4081 tccgtcgcga gcatcacggc gtcatgctcg aggtgcgtga gctcggcttc ggcctggagc
     4141 gcgtcttgaa ccgagcctcg ccccgaagcg aactgcgcgg ccgccgcgct ctgcatcgat
     4201 tgcatgagcg cgatgtgctg cgcgttgatc gcgagagacc gcgtcgtgac gaaatattgg
     4261 tcgtaaagca tgacagcgct cactgcgagc tcacgctcca cggcttcgta atcggccttg
     4321 gcggccgccg cttcggcgct cgcggccgct tgctcgaagc cgcgctttcc gaaccagggc
     4381 agcttctggc tcacgccgat ctcgtagccg aacggcgcct gcttcgagcc gatcgagagc
     4441 ggcgcgatgg ccacgtccac catcggatcc tcgaagctgc cctcctcgcg cgtgcgggcg
     4501 agcgccgcac gaaagccgct ctgcgcgctc tcgatacttg gatttcgccg cagtacctcg
     4561 cgcacgaaag ccgtgcgttc gaggacgcgg ccctcgttcg ctgggagctc gctcgacgtg
     4621 tccaggacgt cctgctccgc gtgcggcgct ggtcgcgacg tgtcga
//
LOCUS       DATIML010000246         2805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2647599, whole genome shotgun sequence.
ACCESSION   DATIML010000246 DATIML010000000
VERSION     DATIML010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2647599"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="VLJ38_04310"
     CDS             complement(<1..525)
                     /locus_tag="VLJ38_04310"
                     /inference="COORDINATES: protein motif:HMM:NF014924.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008810 - cellulase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase N-terminal Ig-like domain-containing
                     protein"
                     /protein_id="HSU38762.1"
                     /translation="MLSPPRTPPKLHACLLVLLSALGFATHASAADTDIRLSSVGYLP
                     LRAKRASVVGAATTFTVVRDADGASVLSGALTGPVSDPDTGESVLTADFTSLADPGTY
                     HLAVDGVGRSVSFPVDADVYRSAYVTAMLGFYGWRCGTAVSFDYAGTHFGYPACHLAD
                     AHAEPIGGTGVHDGT"
     gene            complement(581..1015)
                     /locus_tag="VLJ38_04315"
     CDS             complement(581..1015)
                     /locus_tag="VLJ38_04315"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSU38763.1"
                     /translation="MARAPKRPTAAASELAEFATALYQLVETLRGEHEEAAASVGLTA
                     PQATILTLLAEPTSMSRFAERMGCDASNITGIVDRLEAKQFVVRSVDKADRRVKRIAR
                     TPAGDQAVTRFYQELAHASSLAKLTPKAKRGLLAALAEVQRS"
     gene            1109..1552
                     /locus_tag="VLJ38_04320"
     CDS             1109..1552
                     /locus_tag="VLJ38_04320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38764.1"
                     /translation="MVPTVAAIRPGFERLLLGGLVAGAISACANNVYFMVYRWATGFY
                     GHEPSFTSITLSSLAPSAPAALGYFVLARLTARARVVFASLTAIIIVISFEGLLRQTL
                     PDGAPKPAGFDGAVMPMHVVVGLATALLVPWFARRRVPTGPRETA"
     gene            1549..2046
                     /locus_tag="VLJ38_04325"
     CDS             1549..2046
                     /locus_tag="VLJ38_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38765.1"
                     /translation="MSVAALHLALSAAARLSAVLFALSLLVPALSRERVGRSGRLQLA
                     FIIAHTLHFAFVSWLASVSGGAGMFPGGRSVAEVGGWPVVLAIFALFYAVALIAFIAR
                     RAGAGRARLRVAGRLATAFIGFMFVATYLPLVARSGWYALLAVLVTAAVAADLRACAP
                     ASGQA"
     gene            2237..2686
                     /locus_tag="VLJ38_04330"
     CDS             2237..2686
                     /locus_tag="VLJ38_04330"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HSU38766.1"
                     /translation="MKLELLRPRLLAAVRRTAAPREIPNVFRPALDRVWAFLGKHEGL
                     RTDGHNVFLYHHVQRPETGMPIDFGVEVTRRFDPEDEVHCVETPAGEALTVVHRGPYG
                     GLPKAHAALRDWCAANGRTIGSHSLEIYGDWSDDPSQLETTIQYLLR"
BASE COUNT          422 a          936 c          939 g          508 t
ORIGIN      
        1 tgtcccgtcg tgcacgcccg tgccgccgat cggctccgcg tgggcgtccg cgaggtggca
       61 cgccgggtaa ccgaagtgcg tcccggcata gtcgaacgag accgccgtcc cgcagcgcca
      121 gccgtaaaag ccgagcattg ccgtgacgta cgcgctccgg tacacgtccg cgtcgaccgg
      181 gaagctcacc gagcggccga cgccgtccac tgcgaggtga tacgtgccgg gatcggcgag
      241 ggacgtaaag tcggccgtca gcacgctctc gcccgtatcg gggtcgctca ccggtccagt
      301 gagcgcgccg ctcagcaccg aggcgccgtc ggcgtcgcgc acgaccgtga acgtcgtcgc
      361 cgcaccaacg accgacgccc gcttggcgcg gagcggcagg tacccgaccg agctcaggcg
      421 gatatcggtg tcggcagccg acgcgtgcgt cgcgaacccg agagcggaga gcaagacgag
      481 caagcaggca tgaagcttcg gcggcgttcg aggaggggag agcatcggga accggttcca
      541 gatactagcc gctcgccggc agactagcca cttattcgcg ttagctgcgc tgaacctcag
      601 cgagggcggc cagcaagccg cgtttcgctt tgggggtcag cttggccaaa gacgaagcat
      661 gggccagctc ttggtagaag cgggtaacgg cctggtcgcc ggcgggggta cgggcgatgc
      721 gcttgacacg gcggtctgcc ttgtcgacgg agcgcacgac gaattgcttg gcttcgaggc
      781 gatcgacgat accggtgatg ttcgaggcat cgcagcccat gcgctcggcg aaccggctca
      841 tggaggtcgg ctccgcgagc aatgtcagaa tcgtcgcctg gggcgcggtc agtccgacgc
      901 tggcggcagc ctcttcgtgc tcaccacgta gggtctccac gagctgatag agagcggtcg
      961 cgaactcggc gagctcactc gctgccgcgg tcggtctttt gggcgcgcgc gccatgtctc
     1021 gaagcatact ccgaaagctg ccggcctcaa aggttgacga tctcaatctt tccgatatac
     1081 ttgatggcat caacctttga ggtcatccat ggtaccgacc gttgcggcta tcagaccggg
     1141 tttcgagcgg ctactgctcg ggggtctcgt ggcgggcgct atcagcgcat gcgcgaacaa
     1201 cgtctatttc atggtctacc gctgggccac gggtttctac gggcacgagc cctcgttcac
     1261 gagcatcacg ctctcttcgc tcgcgcctag cgcgccggcg gcgctcggct acttcgtcct
     1321 ggcgcgactc accgcgcggg cgcgggtggt ttttgcaagt ctgacggcga tcatcatcgt
     1381 catcagcttc gagggcctcc ttcgccaaac tctccccgat ggcgcgccga aacctgcagg
     1441 cttcgatggc gcggtcatgc ccatgcacgt cgtcgtaggt ctcgcgacgg cgctgctagt
     1501 gccgtggttt gcgcggaggc gcgttccaac aggaccgcga gaaacggcgt gagcgtcgcc
     1561 gcactgcacc tggcgctgag cgctgcggcg cggctatcgg cggtgttgtt cgcgctctcg
     1621 ttgctcgttc ctgcgctatc acgagagcgc gtggggcgct ccgggcggct ccaactcgcg
     1681 ttcatcatcg ctcacacgct gcacttcgcg ttcgtcagct ggcttgcaag cgtgagcggc
     1741 ggcgccggca tgtttccagg cggccgcagc gttgcggaag tgggcggctg gcccgtcgtg
     1801 ctcgccatct tcgccctctt ctacgccgta gcgttgattg ccttcatcgc gcggcgcgcc
     1861 ggcgcgggtc gagcgcggct gcgcgtcgcc ggcagactcg cgactgcctt catcggcttc
     1921 atgttcgtgg ccacgtacct tcccctcgtc gcgcgctccg gctggtacgc acttctcgct
     1981 gtcctcgtga cggctgccgt cgccgccgat ctacgagcgt gtgcgccggc gtccggtcag
     2041 gcatgaccgg cgatctgctc actgacgcgc cacagccgct cggcgagctc ggcgtcgcgt
     2101 cccgctgccg aagcgctcgc gacggcgcag tcggccaggt aggcgcccga ttggccggcg
     2161 agctcagggg cggtcgcggc aaagacgctg gtcgccgcgc ccccgtctcg agctcagctc
     2221 cgctatggaa gacgccgtga agctcgagtt gctcagaccg cgattgctcg ctgccgttcg
     2281 gcgcaccgcg gcgcctcggg aaattccgaa cgtcttcagg cccgcgctcg atcgcgtctg
     2341 ggcatttctc ggcaagcacg aaggcctgcg tactgacggg cacaacgtct tcctttacca
     2401 tcacgtgcag cgccccgaga cgggaatgcc aatcgacttc ggggtcgagg taacgcgacg
     2461 cttcgacccg gaggacgaag ttcactgcgt cgagacgccc gctggcgaag cgcttacggt
     2521 cgtgcaccga ggcccctacg gcgggctgcc gaaggcgcac gccgctcttc gcgattggtg
     2581 cgcggccaac ggccggacca ttgggagcca cagcctcgag atttacggcg attggtcaga
     2641 tgacccgagc cagctcgaga cgacgatcca gtacctattg cgctagatcg cctgcttccg
     2701 gcagcgcctc tgcgcgtcag tgtcgtcggt gctactctcc ttgaacgatg tggcgccgct
     2761 cgacggttct attcgtactg ctcatcgggg gcctggccgg ctgcg
//
LOCUS       DATIML010000247         2638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3514101, whole genome shotgun sequence.
ACCESSION   DATIML010000247 DATIML010000000
VERSION     DATIML010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3514101"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VLJ38_04335"
     CDS             complement(<1..659)
                     /locus_tag="VLJ38_04335"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU38767.1"
                     /translation="MLENLVRASVRARGAVLAALGLLLVIGVWAARTLPIDALPDVST
                     SQVSVLTQASGMSPVEMERTVTMPIENALNGVPGSVDQRSVSRSGLSAVTVIFRDDVN
                     IWFARQLVLERLRGVELPPQASAPELAPVSSGLGEIFQFVVRSEQHSAMQLRTLLDWE
                     IVPKLRNVPGVVEVNTMGGDLKEYHVVIDRGRLHAHEMTLKDVAAALESANVTVGGGY
                     L"
     gene            complement(671..1912)
                     /locus_tag="VLJ38_04340"
     CDS             complement(671..1912)
                     /locus_tag="VLJ38_04340"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU38768.1"
                     /translation="MNTQTDTITSDADSRRPTGHTLAPEGRKPRSRSRWLLIGGAALL
                     GAGALAWTLTGRGGPAAPPTAAPDTPRIDGQQIRYSKGFAERSGIKLTKAVSAKLIPV
                     ITAVGTMDFDPEHVAAIGARLRGLVTRVVKFEGDTVEAGTVLAVIDSAELGEAQASVS
                     TLEAEKKAADLNLKRENELVEKRLSTAREAEVAATEAERYQNLLAAARQKVSALSGLG
                     NRSNRFGAHELRSPMKGTVVARNVSPGQAVEGDLVAFRVADTERLWVGLDVFEKNLGL
                     IKLDDKVDLSPLSAPTDTFEGRVARIGAVIDPETHSTHVRIEIDNKDGRLRAGQAVNA
                     RIHASARGEQVSTLVPTSAITFVDGKPTVFVSTGEGAVRVASVETGSTDGAQTEVKSG
                     VNAGESVVSDGVFALKSELFR"
     gene            complement(1909..>2638)
                     /locus_tag="VLJ38_04345"
     CDS             complement(1909..>2638)
                     /locus_tag="VLJ38_04345"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU38769.1"
                     /translation="LAAGDTTERDAALASLEAARNEALLSETRVDILEHAGELAELTG
                     REVDPVSSVDETPPPFTPKRTTPELAHGMPSARVLEAQARYYASAEERLKREAYQPLS
                     LGLTGGRGDYGEARIGGGIGYTWPLFRSNVPERARAEAERQRSLDELNVRRKLVARRV
                     ELLEHELVELGRTVDIVTHSALPAATRAVQAAVETNRAGKGDWLTVLVSRRDLSALSL
                     RRLELLDRNWLVLADLVAMTGELP"
BASE COUNT          374 a          921 c          902 g          441 t
ORIGIN      
        1 tcgagataac cgccacccac cgtgacgttg gcgctctcga gcgccgcggc gacgtccttc
       61 agcgtcatct cgtgggcgtg gagccggccg cgatcgatga ccacgtggta ctccttgaga
      121 tcgccgccca tcgtgttcac ttcgacgacg ccgggcacgt tcctgagctt cggcacgatt
      181 tcccagtcga gtagcgtgcg gagctgcatc gccgagtgct gctcgctccg cacgacgaac
      241 tggaaaatct cgcccaaacc cgagctcacg ggcgcaagct cgggcgcgct cgcctgcggc
      301 ggcagctcca ccccgcgcag ccgctcgagc acgagctggc gcgcgaacca gatgttcacg
      361 tcgtcgcgga agatgaccgt caccgccgaa agtcccgagc gcgagacgct gcgctgatcg
      421 accgagcccg gcacgccgtt caaggcgttc tcgatcggca tcgtcacggt gcgctccatc
      481 tcgacgggcg acatgcccga cgcctgggtc agcaccgaca cctgtgacgt cgacacgtcg
      541 ggtagcgcgt cgatcggcag cgtgcgcgcc gcccacacgc cgatgacgag caggagcccg
      601 agcgcggcaa ggacggcgcc gcgcgcacga acggaagcac gaaccaaatt ctccagcatg
      661 ctgtctccgt tcagcgaaag agctcgctct tcagcgcgaa cacgccgtcg ctcacgacgc
      721 tctcgcccgc gttgacgccg ctcttcactt ccgtttgcgc gccgtccgtc gaaccggtct
      781 cgacgctcgc cacgcgcacg gcaccctcgc ccgtgctcac gaacacggtc ggcttgccgt
      841 cgacgaacgt gatcgccgaa gtgggcacga gcgtgctcac ttgctcgccg cgcgccgacg
      901 cgtgaatgcg cgcgttgacg gcttgcccgg cgcgcaggcg cccgtctttg ttgtcgattt
      961 cgatacgcac gtgcgtgctg tgcgtctcgg gatcgatgac cgcgccgata cgcgcgacgc
     1021 gcccctcgaa cgtgtcggtc ggagccgaga gcgggctcag atcgaccttg tcgtcgagct
     1081 tgattagccc aaggttcttc tcgaagacgt cgagcccgac ccagagccgc tcggtgtcgg
     1141 ccacgcggaa cgcgacgaga tcgccctcca cggcttgtcc gggtgacacg ttgcgcgcga
     1201 ccacggtgcc cttcatcgga ctcctgagct cgtgcgcgcc gaaacgattc gagcggttgc
     1261 cgaggccgga gagcgccgac accttctggc gcgccgccgc gagcagattt tggtagcgtt
     1321 ccgcctcggt ggcggcgacc tccgcctcgc gcgcagtcga taggcgcttc tcgacgagct
     1381 cgttttcgcg cttgaggttg agatcggccg ccttcttctc ggcttcgagc gtgctcacgg
     1441 aggcctgtgc ctctccgagc tcggcgctgt cgatcacggc gagcacggtg ccggcctcga
     1501 cggtgtcacc ctcgaacttc acgacgcgcg tcacgagtcc gcgcaggcgg gccccgatcg
     1561 cggccacgtg ctcgggatcg aaatccatcg tcccgactgc ggtgatgacg gggatgagct
     1621 tcgcgctcac ggctttggtg agcttgatgc cgctgcgttc ggcgaagccc ttcgagtagc
     1681 ggatctgctg gccgtcgatg cgcggcgtgt cgggcgccgc cgtgggtggt gccgccggcc
     1741 cgccccgacc cgtgagcgtc caggcgagcg cgccggcgcc gaggagcgcc gcgccgccga
     1801 tgaggagcca gcgcgaacgc gaacggggct tacggccctc gggcgcgagt gtgtgtcccg
     1861 tgggtcgtcg cgaatcggcg tccgaagtga tcgtgtcggt ttgagtgttc acggcaattc
     1921 tccggtcatg gcgacgaggt cggcgagcac gagccagttg cgatccaaaa gctcgaggcg
     1981 gcggagcgaa agcgcggaga ggtcgcgcct gctcacgagc acggtgagcc aatcgccttt
     2041 accggcgcga ttggtctcga ccgccgcctg gaccgcgcgt gtcgccgccg gcagcgccga
     2101 gtgcgtcacg atgtccacgg tgcgcccgag ctcgacgagc tcgtgctcga ggagctcgac
     2161 gcggcgcgcg acgagctttc gtctgacgtt gagttcgtcg agcgaccgct ggcgttcggc
     2221 ttccgcgcgc gcgcgttcgg gcacgttcga gcgaaagagc ggccaggtgt agccgatgcc
     2281 gcccccgatg cgcgcctccc cgtagtcgcc gcggccgccc gtgagtccca ggctcagcgg
     2341 ctggtaggct tcccgcttca gacgctcctc ggcggaggcg tagtagcggg cctgcgcctc
     2401 gagcacgcgc gcggacggca tcccgtgcgc gagctcgggt gtggtccgct tcggcgtgaa
     2461 gggcggcggc gtttcgtcta ccgagctcac ggggtcgact tcgcgtcccg tgagctcggc
     2521 gagctctccc gcgtgctcga ggatgtcgac gcgcgtctcg ctgagcagcg cctcgttgcg
     2581 cgccgcttcg agtgacgcga gcgccgcgtc gcgctcggtc gtgtcacccg cggcgagg
//
LOCUS       DATIML010000248         4251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2937149, whole genome shotgun sequence.
ACCESSION   DATIML010000248 DATIML010000000
VERSION     DATIML010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4251
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2937149"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VLJ38_04350"
     CDS             complement(<1..294)
                     /locus_tag="VLJ38_04350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38770.1"
                     /translation="MNLRFVFCGVGLVVTLGCGGAADIPETPDLRTLISNYDAPDGDL
                     DATRVAAVLAAAPPMPELAAGLRSTGLIASHVDDVSTDTEPSSGRGVRLQGSVK"
     gene            435..1490
                     /locus_tag="VLJ38_04355"
     CDS             435..1490
                     /locus_tag="VLJ38_04355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38771.1"
                     /translation="MRHRGFGVSLLASLVAVALACKPTGPRPLEHPEQETMAPADARA
                     FLAKVQKERGVAAEGAPVTSMDELLDVIHSDDVRRLESAGRFVDGKPGIDALVVHAMV
                     ELVWSDALSTVSRVVEEQRKRADATQARLSQQRDAGRKLSPEQESELERAEKDVKFDA
                     EAKVALDVLAKDHLQVAGDLVNEALRQFPEDGRTYRVAAYYYLLAGDWPHFDVAMTWL
                     KNNEKDEARIQYLRGMESLRRYEIQADANRFFHEALRLDPKLVRAQAKLVLTENGIDA
                     IHRELETLRALAPQHPVVTIAGPAITSEYDTAKSLTRALESRQPGPGAASAAPAASAA
                     PSPAGAPPNPPASAPAH"
     gene            complement(1536..2924)
                     /locus_tag="VLJ38_04360"
     CDS             complement(1536..2924)
                     /locus_tag="VLJ38_04360"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU38772.1"
                     /translation="MLDAPIPDDEEKRLALLAACKIMHTPAEEAFDDIARLAAEICGT
                     EIALITLVGAERQWFKARVGVTQTETARDLSFCGHCINERHPMVIEDTLLDARFADNP
                     LVTGDPHLRFYAGVPLLIEAGSSVGALSVADRAPRSLSPQKLASLERLAAQVARELRL
                     RRDLDRVNSASQRPASLLIGRDSVIGARWRIVREIGRGAVGAVFEARDDAGQHVAVKV
                     LLPEWRAQEAVLERFAREARVLMRLTSPHVGKLLDVGNLDLELGDLPYLVLEYLEGTD
                     LDNVLAQVGRVPFRKAFAWGADACDGVAEAHELGVVHRDLKPSNVFLARGHAPPPVVK
                     VLDFGIAAGEPGRRSGLTNVSYPLGTPAYMSPEQMLASNDVDPRSDIWSMGVLLYQLI
                     AGSLPFAGSNDLELFSAAMTRPPVPLRARVKDPVPAEVERILFRCLSKDRGARFTTMH
                     ELSSALRAVVAT"
     gene            complement(3044..3700)
                     /locus_tag="VLJ38_04365"
     CDS             complement(3044..3700)
                     /locus_tag="VLJ38_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38773.1"
                     /translation="MSLARAALSLLTVTTLLGAATSARAADTTDGSASDSSTAGTPSS
                     LEVSALVGMSVTQGNPAYEAATTSFRRVGVYSELGVGYRSSYFIDPFISVGYGALASA
                     DTRMPDGEWGAAGTLHQNLGIWFISPGITSDIWRFHLRLGIGLAIVKEGNSFHSDKNT
                     ATQTPFAGQVGLGFNCYESHRFRVDIDARYVKAQGADVSFGLLGVTARGDLITFGGGS
                     "
     gene            complement(3697..>4251)
                     /locus_tag="VLJ38_04370"
     CDS             complement(3697..>4251)
                     /locus_tag="VLJ38_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38774.1"
                     /translation="GEIIPTLQEGLDMMVAETEFEGTYLDEKTPDGVLPSARVAAAVI
                     ADLKARNENDDPSDDRHFVPVIGIPNADVLDAWHTAKATLQAEGIDVPPCLIEYDPNL
                     VISEGCVAWGPTWTLGPQPDNVLKVRAAGKRTFFWTLNQTDFVDEFLQQAQPDGILTG
                     RAAMVFHRYQEIGVTPPLLPGASP"
BASE COUNT          730 a         1418 c         1427 g          676 t
ORIGIN      
        1 tttgacggag ccttgcagac gaacgccgcg gccggagctt ggctccgtgt cggtgctgac
       61 gtcgtcgacg tggctcgcga tgagtccagt cgagcgcagc ccggccgcga gctccggcat
      121 cggcggcgcg gcggcgagca ccgcggcgac acgcgttgcg tcgagatcgc cgtcaggggc
      181 gtcgtagttg gaaatcaacg tccgcaggtc cggcgtctcg ggaatgtccg cggcgccgcc
      241 gcagccgagc gtcacgacca agccgacgcc gcagaataca aaacgcaaat tcaaggccct
      301 gagtgtactc gaagtctcgt gtcgagcccg tgaccgcaag cgaataaatt tcggattgaa
      361 tcggcacccg cgacgaagcg ctcgtcactt tgtcggctgg gcaagcggtg tctcgaactg
      421 gtaggttccg gcccatgcgt caccgtggtt tcggagtcag cttgctcgcc tcgctcgtcg
      481 ccgtcgcgct cgcgtgtaag cccacggggc cacgtccgct cgagcatccc gagcaggaga
      541 cgatggcgcc cgccgacgcg cgcgcattcc tggccaaagt gcagaaggag cgcggcgttg
      601 cggccgaggg cgcgcccgtg accagcatgg acgagctgct cgacgtgatt cacagtgacg
      661 acgtgcggcg cctcgaatcg gcgggccgct tcgtcgacgg taagccgggc atcgacgccc
      721 tcgtggtcca cgccatggtc gagctcgtct ggagcgatgc tttgtcgacg gtgagtcgcg
      781 tcgtcgagga gcaacgcaaa cgcgcggacg cgacgcaagc gcgtctctcg caacagcgcg
      841 acgccggccg caagctcagc ccggagcagg agtcggagct cgaacgcgcg gaaaaggacg
      901 tgaagttcga cgccgaagcc aaagtcgcgc tcgacgtgct cgccaaggat cacctgcaag
      961 tcgccggcga tttggtgaac gaagccttgc gccaatttcc cgaagacggc cgcacgtatc
     1021 gcgtcgctgc ctactattac ctcttggcgg gcgactggcc gcacttcgac gtggcgatga
     1081 cgtggctcaa aaacaacgag aaggacgaag cccgcatcca atacctgcga ggcatggagt
     1141 ccctccggcg ctacgagatt caagcagacg ccaaccgctt ctttcacgag gcgttgcggc
     1201 tcgatccgaa gctcgtgcgc gctcaggcca aactcgtgct caccgagaac ggcatcgacg
     1261 cgattcaccg cgagctcgag acgctccggg cgctcgcgcc ccagcacccg gtcgtcacga
     1321 tcgccggccc cgcgatcacg agcgaatacg acaccgccaa gtcgctcacg cgcgcgcttg
     1381 aatcgcgtca gcccggtccc ggcgcagcga gcgcggcgcc agctgcatcg gcggcaccct
     1441 cgcccgcagg cgctccccca aatccgccgg cgagcgctcc ggcgcactga agccgccaac
     1501 gctccacctg gaacggcgcc gaaatcgcgc gcaattcagg tcgcaaccac tgcacgcagc
     1561 gcgctcgaga gctcatgcat cgtcgtgaag cgtgcgccgc ggtccttcga caagcagcgg
     1621 aacaggatcc gttcgacttc cgcgggcacc ggatccttca cgcgcgcgcg aagcggcacg
     1681 ggcgggcgcg tcatcgcggc cgaaaagagc tcgaggtcgt tcgaacccgc gaacggcagg
     1741 ctgccggcga tgagttgata aagtaggacg cccatcgacc agatgtcgct gcggggatcg
     1801 acgtcgttcg aggcgagcat ctgctccggc gacatgtagg cgggggttcc gagcgggtac
     1861 gagacgttcg tgagaccgga gcggcgcccg ggttcgcccg cggcgatgcc gaagtcgagg
     1921 accttgacga cgggcggcgg cgcgtgcccc cgcgccaaga acacgttcga cggcttgagg
     1981 tcgcggtgca cgacgccgag ctcgtgcgct tccgcgacgc cgtcgcaagc atcggctccc
     2041 caggcgaagg ctttgcgaaa cggcacgcgc ccgacttgag cgagcacgtt gtcgagatcc
     2101 gtgccctcga ggtactcgag cacgaggtag ggcaaatcgc cgagctccag gtcgaggttg
     2161 cccacgtcga gcaatttccc gacgtgcggt gacgtgagcc gcatcaacac gcgtgcttcg
     2221 cgcgcaaagc gctcgagcac ggcctcctgc gcgcgccatt ccggtaacag caccttcacg
     2281 gccacatgct gtccggcatc gtcgcgcgcc tcgaacacgg cgcccacggc gccgcggccg
     2341 atctcgcgca cgatgcgcca gcgcgcgccg atgacgctgt ccctcccgat gagcaggctc
     2401 gcggggcgct gtgacgccga gttcacgcga tcgagatcgc gccgcaagcg gagctcgcgc
     2461 gcgacctgcg cggccaggcg ctcgagcgac gcgagcttct gcggtgagag gctccgtggc
     2521 gctcggtcgg cgacggacag cgcgcccacc gaggagcccg cttcgatcag gagcggcacg
     2581 cccgcgtaaa atctaaggtg cggatcgccc gtgacgagcg ggttgtcggc gaagcgcgcg
     2641 tcgagcagcg tgtcctcgat caccatcgga tggcgctcgt tgatgcagtg tccgcaaaac
     2701 gagaggtccc gcgccgtctc cgtttgcgtc acgccgacgc gcgccttgaa ccactggcgc
     2761 tcggcgccga ccagcgtgat gagcgcgatt tccgtgccgc aaatctcggc cgcgagccgg
     2821 gcgatgtcgt cgaacgcctc ctcggccggc gtgtgcatga ttttgcacgc cgcgagcagc
     2881 gcgagtcgct tttcctcgtc gtcagggatc ggcgcgtcca gcatggggca ctctcgcctc
     2941 cgttcgcctc atgatcatgg catgagtttt cgttcgggtg tcgcgcccgt tgagcccgcg
     3001 gacagcgcgt ggaaagcgcg cgaattttgg cgagggcgga gcttcagctc ccgccgccga
     3061 acgtaatcaa atcgccacgt gcggtcaccc cgagcaggcc gaaggaaacg tcggcgcctt
     3121 gcgccttcac gtagcgggcg tcgatgtcga cgcgaaagcg atggctttca tagcagttga
     3181 agccaagtcc cacctgacca gcgaacggcg tttgggtcgc cgtgttcttg tcggagtgga
     3241 aactgttgcc ttctttcacg atggcgagcc cgatgccgag tcgcaggtga aagcgccaaa
     3301 tgtcgctcgt gatacctggc gagatgaacc agatcccgag gttctggtgg agtgtgcctg
     3361 ccgcgcccca ctcgccgtcc ggcatccgcg tgtccgctga ggcgagcgcg ccgtagccga
     3421 cggaaatgaa tggatcgatg aagtagctcg agcgatagcc gacgccgagc tcgctgtaga
     3481 cgcccacgcg ccggaacgaa gtcgtggccg cttcgtaggc ggggttgccc tgcgtgacgc
     3541 tcatgccgac caaagcggac acttcgaggg acgaaggagt tccggcagtg ctcgagtcgg
     3601 acgccgagcc gtcggtcgtg tccgccgcgc gcgcgctggt tgccgcgccg agcagcgtcg
     3661 tgaccgtgag taggctcagc gccgcgcgcg cgaggctcac ggggacgccc ccggcaagag
     3721 cggcggcgtg acgccaatct cctgatagcg gtggaacacc atcgccgcgc ggccggtcag
     3781 aatcccgtcc ggctgcgcct gttgcaggaa ctcgtcgacg aaatcagtct ggttgagtgt
     3841 ccagaagaag gtgcgtttgc ctgccgcgcg gaccttcagc acgttgtcgg gctggggtcc
     3901 caaagtccaa gtcgggcccc aggccacgca accctccgaa atcacgagat tcggatcgta
     3961 ctcgatgagg cacggcggca cgtcgatgcc ttcggcctgg agcgtcgctt ttgccgtgtg
     4021 ccaggcgtcg agcacgtcgg cattcggaat gccgatcacg ggcacgaagt ggcgatcgtc
     4081 gctgggatcg tcgttctcgt tgcgggcttt caggtcggcg atcaccgccg ccgcgacgcg
     4141 cgcgctcggc aacacgccgt ccggcgtctt ttcgtcgagg tacgtcccct cgaactcggt
     4201 ctcggcgacc atcatgtcga gcccttcctg gagcgtcggg atgatctcgc c
//
LOCUS       DATIML010000249         2010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3514562, whole genome shotgun sequence.
ACCESSION   DATIML010000249 DATIML010000000
VERSION     DATIML010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3514562"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..925)
                     /locus_tag="VLJ38_04375"
     CDS             complement(<1..925)
                     /locus_tag="VLJ38_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38775.1"
                     /translation="MKRFRLPRLRTVVAGLVLAGLTAVAASRRESTARARAERHAEHR
                     AHPTSNHRDHARHPLSPASPWASPAACENALARGGAERAAGVARVGAWNLHWFPDGRP
                     GDAAPGYGADLGWLACAIAWMKLDVLAVEEIKRPPRGQAGLDDLTHRLDALTGGDWQS
                     LLDDCPHASGQHVGLLYDKKRTTLRSHAVVAALNPLGEPCRDQLRPGLAGYFTFPGGL
                     DLSIVAAHLKSGTDERGLDDRARSFAAFGRAAAGESARTGDRDVLFIGDLNTMGCDTC
                     VPEITPAAELAREDAVFAAARTLSRVSTEPAC"
     gene            complement(1013..1747)
                     /locus_tag="VLJ38_04380"
     CDS             complement(1013..1747)
                     /locus_tag="VLJ38_04380"
                     /inference="COORDINATES: protein motif:HMM:NF015390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008810 - cellulase activity [Evidence
                     IEA];
                     GO_process: GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate binding domain-containing protein"
                     /protein_id="HSU38776.1"
                     /translation="MSASKARAVSALGLASLVLGLGACVKKANAVAPDPDSVEARSCP
                     SPSAVISDCESQNKTNFVEGRGGYWYTFLDTKDNGGSEIWPTSGALGGTFEMSPDGAV
                     GTPHQARMKGKIGGGDIVYAGMGLNFVDPKGTYDASRYGGIAFWAKKNPGSTARVRLK
                     LPDAQTDPDGKVCKQCFNDHGMDLELYDEWTLYTVPFKSMRQEDWGPKDNGIEPSKVY
                     GIQFQVSEKGAPFDISVDELKFTGCR"
BASE COUNT          306 a          692 c          684 g          328 t
ORIGIN      
        1 agcaggcggg ctccgtcgag acacggctga gcgtcctcgc tgcggcgaag accgcgtcct
       61 cgcgcgccag ctcggccgcg ggcgtgatct cggggacgca cgtgtcgcag cccatcgtgt
      121 tcaggtcgcc gatgaagagt acgtcgcggt cgcccgtgcg cgcgctctcg cctgcggcgg
      181 ctctgccgaa cgcggcgaac gagcgcgccc gatcgtccag gccccgctcg tcggtgccgc
      241 tcttcaaatg tgccgcaacg atgctgagat cgagtccgcc ggggaaggtg aagtacccgg
      301 cgaggcccgg ccgcagctga tcacgacatg gctcgcccag cggattgagc gcggccacga
      361 cggcgtggct ccggagcgtc gtgcgcttct tgtcgtaaag cagcccgacg tgctgtccgg
      421 aagcgtgcgg gcaatcgtcg agcaggctct gccaatcgcc gcccgtgagc gcgtccagcc
      481 gatgcgttag atcgtcgagt cccgcctgtc cccgaggcgg gcgtttgatc tcttcgacgg
      541 cgagcacgtc gagcttcatc caagcgatcg cgcaagcgag ccagccgagg tccgcgccgt
      601 aaccgggcgc ggcgtcgccg ggccggccgt cgggaaacca gtgcaaattc caggcgccga
      661 cgcgagccac gcccgccgcc cgctccgcgc cgccgcgcgc gagcgcgttt tcgcacgccg
      721 cagggctcgc ccacggcgaa gcgggggaaa gtggatgtcg cgcgtggtcg cgatgattcg
      781 aggtcggatg agcacgatgc tcggcgtgac gctcggcgcg agcacgcgcc gtcgactcgc
      841 ggcgcgaggc ggcgacggcc gtgagcccgg cgagtacgag cccggcgacg accgtacgca
      901 ggcgtggcag acggaaccgc ttcatgcgct gtccgccatc ctacgccgcg tgcgccctcc
      961 ggccgagcgt tgacgagcag gtcgcggacg aaaaaggtcc gctcgcgcgt gttcagcggc
     1021 agccggtgaa cttgagctcg tccaccgaga tgtcgaacgg cgcgcctttt tcgctcacct
     1081 gaaactgaat gccgtacacc ttcgagggct cgatgccgtt gtctttcggg ccccaatcct
     1141 cttgccgcat cgacttgaac ggcaccgtgt agagcgtcca ctcatcgtag agctcgaggt
     1201 ccatgccgtg atcgttgaag cactgcttgc aaactttgcc gtccggatcg gtttgcgcgt
     1261 caggcagctt gaggcgcacg cgcgccgtgg accccgggtt cttcttcgcc caaaacgcga
     1321 tgccgccgta gcggctcgcg tcgtacgtgc ccttcggatc cacgaagttt aggcccatgc
     1381 cggcgtagac gatgtcgccg ccgccgatct tacccttcat gcgcgcctga tgcggcgtac
     1441 cgaccgcgcc gtcggggctc atctcgaagg tgccgccgag cgcgcccgaa gtcggccaaa
     1501 tctccgagcc gccgttgtcc ttggtgtcga ggaacgtgta ccaatacccg ccgcgcccct
     1561 cgacgaagtt cgtcttgttc tgcgattcac agtccgagat gacggcgctc ggggaggggc
     1621 aggagcgtgc ctccacgctg tccggatccg gcgcgacggc attggctttc ttcacgcaag
     1681 caccgagtcc gagcacgagc gaagcgagac cgagcgcgga aaccgcgcgt gcttttgacg
     1741 ctgacatctg ccggtctatg gccggcgcgc tgcggctcgg tcgacaaatc gaccgagccc
     1801 tcgcgtgacg tttcggcgag cgcgaacgga cgcgcgtcgg cgcgccgcgt cagtggagcg
     1861 cgggcgcctc ttcgtaacga gtcctgatgg cgcccggtcc gagcaaacgg ccgagctcgt
     1921 ccttctcgat cgtctcgcga tcgagcagca cggcgacgag ccggtcgacc gcgtcgcggt
     1981 gatcgcgcac gaccttgagc gcggcttcgc
//
LOCUS       DATIML010000250         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2937359, whole genome shotgun sequence.
ACCESSION   DATIML010000250 DATIML010000000
VERSION     DATIML010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2937359"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..561
                     /locus_tag="VLJ38_04385"
     CDS             58..561
                     /locus_tag="VLJ38_04385"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSU38777.1"
                     /translation="MHSDPPTQDEFRRVLRCRADTVHLITYRTASGSIEGMTATSVAA
                     LSMAPPSILVCVGHTSRARDNIRREGSFGVSILSTIQRELAATAGRTGSDKALAPDIL
                     VATDPTLTPVLKDALGSLQCKLADDREVYTHTVFVGQVMTAAAPSDGEPLLHYLGTFA
                     ELARPSR"
     gene            933..1718
                     /locus_tag="VLJ38_04390"
     CDS             933..1718
                     /locus_tag="VLJ38_04390"
                     /inference="COORDINATES: protein motif:HMM:TIGR00696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HSU38778.1"
                     /translation="MHDPEYEMVEIFGMRIHAVREHEAHALVHRWASAPHDKLRYVVT
                     PNVQHTMVFQENAAFREAYAGASLVIADGWPLVASSRLFGKPLPERVAGSDLLPGLFD
                     LNAARNDQPRTVFLLGAAPGIGEKAAREIHARWPNVRVVGTYSPPPGFERDDAENARI
                     LALVAEAQPDILVVGLGAPKQELWTHRFRHELRAKVALCLGGTIDFMAGATQRAPVWM
                     RKAKLEWVHRALSEPRRLGRRYAEHAVLFPALVARAWVSNRRP"
BASE COUNT          272 a          579 c          581 g          307 t
ORIGIN      
        1 ttgcgctatc tcgttcggcg aaattgagat atttgagaga agtggaccga ggctcgcgtg
       61 catagcgatc cgccgacgca ggacgagttt cgccgtgtgc tgcgctgccg cgccgacacc
      121 gtgcatctga tcacgtaccg cacggccagc ggcagcatcg aaggaatgac cgcgacttcg
      181 gtggcggcgt tgtcgatggc cccgccgtcg atcttggtat gtgtcggcca taccagccgc
      241 gcacgggaca acattcgacg cgaaggttcc ttcggcgtca gcattctttc gacgattcag
      301 cgcgagcttg cggcgacagc cggccgtacg ggcagcgaca aggcgctggc accggacatt
      361 ctcgtcgcca ccgatcccac cctcacacct gtcttgaaag atgcgctcgg cagcctgcag
      421 tgcaagctcg ccgacgaccg cgaagtctac acgcacacgg tgttcgtcgg acaggtcatg
      481 acggcggccg cgccgagcga cggcgagccg ctgctccact atctgggcac cttcgccgag
      541 ctcgcgcgtc ccagccgcta gctcgccctc gcccctcgcg cgctcgagcc gcgcgtccaa
      601 tccgaacggc acgcgctcgc gccgtggagc gtgtggtaaa gtccgacctt cgtgtcgggt
      661 gtaggtagca tcgttggtct ttgcctgagt cgcgggctcg cggtacctgt ggctgtttta
      721 gccgtggaag tgctgagctc cctgggctcg agccggcggg cgatgggcga gcgaccgctc
      781 cggctggccg tattgacgcc cgctcgcgac gaggcagccg ggacgacgtc aacgattggc
      841 ggccttttac ccgagctctg gaagttgccg ctttacggca gcttggcacg cagtggtccg
      901 cacacggatt gggaaccaac ggagcgttcg tgatgcacga tcccgagtac gagatggtcg
      961 agatcttcgg tatgcgcatt cacgcggtgc gcgagcacga ggcgcacgcg ctcgtgcacc
     1021 gctgggcgtc ggcgccgcac gacaagctcc gctacgtcgt cacgcccaac gtccagcaca
     1081 cgatggtctt ccaagagaac gccgcgtttc gtgaagcgta cgccggtgct tcgctcgtca
     1141 tcgccgacgg ctggccgctc gtcgcgtcgt cgcgcctatt cggtaagccc ttgcctgagc
     1201 gcgtcgccgg tagcgatcta ttgccgggcc tcttcgattt gaatgccgcg cgcaacgatc
     1261 agccgcgcac ggtgttcttg ctgggcgcgg ccccgggcat cggcgagaag gccgcgcgcg
     1321 agatccatgc gcgctggccg aacgtgcgcg tggtcggcac gtacagcccg ccgcccggct
     1381 tcgagcgcga tgacgccgaa aacgcccgta ttttggcgct cgtggccgag gcgcaacccg
     1441 acatcctcgt cgtggggctc ggcgcgccca agcaggagct ctggacgcac cggttccgcc
     1501 acgagctccg cgcgaaggtg gcgctctgcc tcggcggcac catcgacttc atggcgggcg
     1561 ccacccagcg cgcgcccgtg tggatgcgca aggcgaagct cgagtgggtc catcgcgcac
     1621 tcagcgagcc gcgacggctc ggccgtcgtt acgcggagca tgcggtgttg tttccggcgc
     1681 tcgtcgcgcg cgcgtgggtt tcgaacagac gaccgtgaag cagccgagta gtgaatgat
//
LOCUS       DATIML010000251         3624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2070118, whole genome shotgun sequence.
ACCESSION   DATIML010000251 DATIML010000000
VERSION     DATIML010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2070118"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VLJ38_04395"
     CDS             complement(<1..507)
                     /locus_tag="VLJ38_04395"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSU38779.1"
                     /translation="MNFLIAVAVSFFACFVVVPFVLFWVRAFGLYVIVRERECLVFEL
                     FGKVRLTLREPGLHSPWADIGPLAALVPLFGRVRRVDMRLDQSYMRSQPVNSEEGAPM
                     GIGVWCEMYVSDPIAYLYKNVDPVGSLRANVSNATVRSLSNMKLNEMLTNRHVMSQAV
                     REEVSAKSK"
     gene            complement(504..1508)
                     /locus_tag="VLJ38_04400"
     CDS             complement(504..1508)
                     /locus_tag="VLJ38_04400"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSU38780.1"
                     /translation="MAEILVGLPFGFLLWFVVRYGALGFYTVAPSERAVLTTFGRAQR
                     LGSSTLEDPIAETLRHDERERYAYPQVHVMGPGFYWKLPWQRVHKVSIATVTVSIGYD
                     PEDASANQGGRILEAVTKDQLNTGLSGQIRFSVSERNLYAYIFGVKNPVAHVMGYFIS
                     VLRDRIARFEAPPETQPLPLNIGGEDPSGMIQGISINDLRKNLRDLNERMDQDCQSTV
                     ARYGIDLDAALITGIDPPAEVDSALAAINTAHNHVSSEISLAQASSDQKIVQSRRAVE
                     IETLNAQAEVEPLVMLAGQLRELSASGPGSLEAYVRNAKLGLFRRARQVVLSAEGSTR
                     "
     gene            complement(1542..2729)
                     /locus_tag="VLJ38_04405"
     CDS             complement(1542..2729)
                     /locus_tag="VLJ38_04405"
                     /inference="COORDINATES: protein motif:HMM:NF014046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="damage-control phosphatase ARMT1 family protein"
                     /protein_id="HSU38781.1"
                     /translation="MPAPPQYPGRIRTDETNAFARHTMEVRVPAILRGVLEQNPGYDA
                     ARRAAVAELAAALAHDAPLPPLAGSAPGADDVRRALEGRAGERWLHTDWFFAETYAYR
                     QLIERVRFWDHAEDPFLPHKREEYASLAHAEAFERALDGKSAPDERLAELFAAGVFGN
                     RIDLSFAASRAHGLEVTADDLLIDERERAVRLVLDGKGPLHVIADNAGTELTLDLVLV
                     DFVLRALSMPVVVHLKVHPTFVSDATPADVRRFLGVAEEPVTSVRSVATRACIARLSD
                     ALEDGRLTLRSHPYWNGPESLWDLPSELADELSTARLVLLKGDANYRRGVGDALWPPD
                     ASFAAATSYFPAPLFALRTLKSDAILGLPPGRAELLDAADASWRVNGRRGVACLGGAL
                     YPG"
     gene            2787..3431
                     /locus_tag="VLJ38_04410"
     CDS             2787..3431
                     /locus_tag="VLJ38_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSU38782.1"
                     /translation="MTAPLTIVGRSSSHFTRTVSIFAAELAAPCAFEPVFDIRSREAH
                     VFGENPMLRVPSLRTPEGTWFGSLNACRELARRSTSDLPLVWPEDLTQPAGANAQEIV
                     TDAMSTGVVIVLSRVNGLADDVPLLDKPFARLAGALAWLEANLDAVLAPLPERRLSFL
                     EVSAFCLLTHLEFRELGRLDGRPRLQAFCSRFGARPSAQQTPYRFDQPPAPLSA"
BASE COUNT          577 a         1211 c         1237 g          599 t
ORIGIN      
        1 cttggatttg gccgagacct cctcgcgcac ggcctggctc atgacgtggc ggttcgtgag
       61 catctcgttg agcttcatgt tcgaaagcga gcgcacggtg gcgttcgaca cgttggcgcg
      121 tagcgagccc acgggatcga cgttcttgta gaggtaggcg atgggatcgc tcacgtacat
      181 ttcgcaccag acgccgatgc ccatcggcgc gccctcttcc gagttcacgg gttgactgcg
      241 catgtaggat tggtcgaggc gcatatcgac gcggcgcacg cggccgaaga gcggcacgag
      301 cgcggcgagc ggcccgatgt cggcccacgg cgagtgcagc cccggctcgc gcagcgtgag
      361 ccgcaccttg ccgaagagct cgaacacgag acattcccgt tcgcgcacga tcacatagag
      421 cccgaacgcc cgcacccaaa acaagacgaa cggcacgacg acgaagcacg cgaagaacga
      481 gacggcgacg gcaatcagaa agttcatcgc gtgctccctt cggcgctgag cacgacctgg
      541 cgcgcgcggc gaaagagccc gagcttggcg ttccgcacgt acgcctcgag ggagcccgga
      601 ccgctcgccg aaagctcccg gagttgcccc gcgagcatga cgagtggttc gacttcggct
      661 tgggcgttga gcgtctcgat ctcgacggca cgccgcgatt gcacgatctt ctggtcggac
      721 gaggcctgcg ccaggctgat ttcgctcgag acgtggttgt gcgccgtgtt gatggcggcg
      781 agcgccgagt cgacctccgc cggtggatcg atgccggtga tgagcgcggc gtcgagatcg
      841 atgccgtaac gcgcgacggt cgattggcag tcttggtcca tgcgctcgtt caagtcgcgc
      901 aggttcttgc gcagatcgtt gatcgagatg ccctggatca tgccgctcgg atcctcgccg
      961 ccgatgttga gcggcaaggg ctgcgtctcg ggcggcgcct cgaagcgcgc gatgcgatcg
     1021 cgcagcacgg agatgaagta gcccatcacg tgcgcgaccg gatttttcac accgaagatg
     1081 taagcgtaga ggttccgctc cgagacggag aagcggattt gtcccgagag tcccgtgttc
     1141 agctgatcct tggtgacggc ttctaggatg cggccgcctt ggttcgcgct cgcgtcttcc
     1201 gggtcgtagc cgatcgagac ggtgacggtc gcgatcgaga ccttgtgcac gcgctgccag
     1261 gggagcttcc agtaaaagcc tggacccatc acgtgcactt gcgggtaggc gtagcgctcg
     1321 cgctcgtcgt gacgcaaagt ctcggcgatc ggatcttcga gcgtgctcga gccgagacgc
     1381 tgggcgcgcc cgaaggtcgt gagcacggcg cgttcgctcg gtgccacggt gtagaagccg
     1441 agcgcgccgt aacgcacgac gaaccagagc aagaacccga acggcagccc gaccagtatt
     1501 tccgccatgc gcgcaggcta cacgcggccc ggcttggctc gctaccctgg ataaagcgcg
     1561 ccgccgagac aagccacacc gcgccgaccg ttcacgcgcc agctcgcgtc cgcggcgtcg
     1621 agcagctccg cgcggcccgg cggcaggccg aggatggcgt cgctcttcaa cgtgcggagc
     1681 gcgaagagcg gcgccgggaa atagctcgtg gctgcggcga atgaggcgtc gggcggccac
     1741 aaggcgtcgc ccacgccgcg tcgataattc gcgtcccctt tgaggagcac gagccgcgcc
     1801 gtcgacagct cgtccgcgag ctcggacggc agatcccaca gcgattcggg gccgttccaa
     1861 tacgggtgcg acctgagcgt gagccgtccg tcctcgagcg cgtccgacag gcgagcaatg
     1921 caggcgcgcg tcgcgaccga gcgcacgctc gtgacgggct cctccgcgac gccgagaaag
     1981 cgccggacgt cggcgggcgt cgcgtcactc acgaacgtcg ggtgcacctt caaatgcacg
     2041 acgaccggca tggagagcgc gcgcagcacg aagtccacga gcaccaaatc gagcgtgagc
     2101 tccgtgccgg cgttgtcggc gatcacgtgg agcggcccct ttccgtcgag cacgagccgc
     2161 acggcgcgct cgcgttcgtc gatcaagaga tcgtcggctg tgacttcgag tccgtgggcg
     2221 cgcgacgcgg cgaagctcag atcgatacga ttgccgaaga cgcctgcggc aaagagctcg
     2281 gcgagacgct cgtccggggc gctcttgccg tcgagcgcgc gctcgaacgc ttcggcatgc
     2341 gcgaggctcg cgtactcctc gcgcttgtgc ggcaagaacg gatcctcggc gtggtcccag
     2401 aagcgcacac gctcgatgag ttggcggtag gcgtacgttt ccgcgaagaa ccaatccgtg
     2461 tggagccagc gttcgcccgc gcggccttcg agcgcgcgcc ggacgtcgtc ggctcccggc
     2521 gccgaacccg cgagcggcgg gagcggcgcg tcgtgtgcga gcgccgccgc gagctcggcg
     2581 acggccgcgc gacgggcggc gtcgtagccc gggttctgct cgagaactcc gcgtaaaatc
     2641 gcggggacgc gcacttccat cgtgtggcgg gcgaacgcgt tcgtttcgtc ggtacggatg
     2701 cgaccggggt actggggcgg cgctggcatg gcgggtcgat tgtctcatat cgcgcgccgc
     2761 ggccgtccgc gctaaaaacc cggcgcatga ccgcgccgct cacgatcgtc ggccgcagta
     2821 gctcgcactt cacgcgcacc gtctcgattt tcgcggcgga gctcgccgcc ccgtgcgcgt
     2881 tcgagccggt cttcgacatc agatcgcgcg aagcgcacgt gttcggtgaa aatcccatgt
     2941 tgcgcgtgcc gagcctgcgc acgccggaag gcacgtggtt cggctcgctc aacgcgtgtc
     3001 gcgagctcgc ccgccgctcg acctcagacc tgccgctcgt ctggcccgag gatctgacgc
     3061 agccggccgg ggcgaacgcg caggagatcg tgacggacgc gatgagcacg ggcgtcgtga
     3121 tcgtcctctc gcgcgtgaac ggtctcgccg acgacgtgcc gctgctcgac aagcccttcg
     3181 cgcggctcgc gggcgcgctc gcgtggctcg aagcgaacct cgacgccgta ctcgcgccgc
     3241 tgcccgagcg gcggctgagc ttcctcgaag tgagcgcgtt ttgcttgctc acgcacctcg
     3301 agttccgcga gctcgggcgc ttggacggac ggcccagatt gcaggcgttt tgctcgcgtt
     3361 tcggcgcacg gccctcggcg cagcagacgc cttaccgctt cgatcaaccg cccgccccct
     3421 tgagcgcgtg acggccctcg ctcgcctcga acgccccacg tgctctccga cattctcctc
     3481 ttcggcgccc tgatcctgat tggtctcaag tacggcctcg tcgctcgcct gcgcgagctc
     3541 gggcgcgtgc tcgatcgcct cgtgaacgtg ctgctcgtcg tgatcgccgt catgtacggc
     3601 gtacagctcg cgtacgtgct gatc
//
LOCUS       DATIML010000252         3302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_339041, whole genome shotgun sequence.
ACCESSION   DATIML010000252 DATIML010000000
VERSION     DATIML010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339041"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VLJ38_04415"
     CDS             <1..374
                     /locus_tag="VLJ38_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HSU38783.1"
                     /translation="LVVLAIEWGSGRRAKFLSNIHLGARDPATGGYVMLGKTFKGMTD
                     ELLAWQTERFLALEVGRDGHVVYVRPEVVVEIAFDGVQRSSQYPGGVALRFARVRRYR
                     PDKRAEEADTIETVQRLAAEP"
     gene            complement(337..1215)
                     /locus_tag="VLJ38_04420"
     CDS             complement(337..1215)
                     /locus_tag="VLJ38_04420"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HSU38784.1"
                     /translation="MKATGNDFMDDNALRLAAALAYYALLSLAPLVVLAIAIAGFVVD
                     EQSARGAIAHELGGVVGSEGGQAVQTIVRSAQAPTAGLLSSIAGIIVLLFGASGVFSE
                     LQSALDTIWEVVPKPGRGIKGLIKDRLFSFAMVMGVAFLLLVSLILTAALGAVGHFLG
                     DALPGGEAVWQIVNFLISLGVVAALFAMMFKTVPDAKVAWRDAWVGGLVTSVLFTIGK
                     FLIALYLGKSSVSSAYGAAGSLVLLVVWVYYSACILLVGAEFTQVYASRFGHRIEPSD
                     KAERLTAPRPAAAPSQ"
     gene            1407..2090
                     /locus_tag="VLJ38_04425"
     CDS             1407..2090
                     /locus_tag="VLJ38_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38785.1"
                     /translation="MPSRLWFGACLLVLTTSCSGDDDASPGSGGGQAASGGSGGSGQA
                     TGGSSGSGQLTAGSGGQSLGGSSGQAAGGMPASAGQAPTLDYPTDTTAEGIQAFIDAA
                     SYRTATWASGMKAPEDPPMGTLSPHGHEYIWYNHALRQSNSEGHTGTSSATGSMAVKE
                     IYTGESVVGHAAMLRTDTKWIMFCLSSESDRCFAGAPANTVTYTSSITNCGCHGGGTI
                     ITAPQMPPP"
     gene            2223..>3302
                     /locus_tag="VLJ38_04430"
     CDS             2223..>3302
                     /locus_tag="VLJ38_04430"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSU38786.1"
                     /translation="MTEAHVASFALFSLLALGCASPGLSTADTGARSDRDFGLTEARD
                     LDPSPDVVSIALRAAPGALEILPGKTTPLASYGGTLPGPLIVAKRGDRLDVHFENGLT
                     EPSTLHFHGIRLPNAMDGVPDMTQAAVAPGATFDYSFTLPDAGLYWYHPHYDTLAELG
                     SGLYGAILVEDPDDPAGLGDETVLVLSDVSLDAEGALLAPSSDPTAVIAGSEGNVVLV
                     NGRIHPTLDVQSGRRQRLRIVNAARARYFSLGLAGHRFVQIGSDGGRLEQPVSVENPV
                     LAPAERVDLLLDPLGDAGTSLELVALPIARGLSLPLSAQVPLVTLRVVPAESAPSPPL
                     PALSRAITPLDTSGAEQVTIALTVDE"
BASE COUNT          567 a         1126 c         1101 g          508 t
ORIGIN      
        1 atctcgtcgt gctcgcgatc gagtggggga gcggccggcg cgcgaagttc ttgagcaaca
       61 tccacctcgg tgcgcgcgat ccggcgacgg gcggctatgt catgctcggc aagacgttca
      121 aggggatgac ggacgagctc ctcgcttggc aaaccgagcg cttcctggcg ctcgaggtgg
      181 gacgcgacgg gcacgtcgtg tacgtgcggc ccgaagtcgt ggtcgagatc gcgttcgacg
      241 gcgtgcagcg gagcagccag tacccgggcg gggtcgcgct gcgcttcgcc cgcgtccgcc
      301 gttatcggcc cgacaagcgg gcggaggaag cggacactat tgagacggtg cagcggctgg
      361 ccgcggagcc gtgaggcgct cggccttgtc gctcggctcg atgcggtgac cgaagcggct
      421 ggcgtagact tgcgtgaatt cggcgccgac gagcaggatg caagccgagt agtaaaccca
      481 gaccacgagc aacacgagcg agcccgcggc accgtaggcc gacgacacgc tcgatttacc
      541 gaggtaaagg gcgatcaaga acttgccgat ggtgaacagc accgacgtga cgaggccgcc
      601 gacccacgcg tcgcgccaag cgaccttggc gtccggcacc gtcttgaaca tcatcgcgaa
      661 gagcgcggcc accaccccga gcgagatcag gaagttgacg atctgccaga cggcctcgcc
      721 gccgggcaat gcgtcgccca gaaagtgacc aacggcgccg agcgctgcgg tcaggatcag
      781 ggacacgagc agcaagaagg cgacgcccat gaccatcgcg aacgaaaaca agcgatcttt
      841 gatcaggcct ttgatgccgc ggcccggctt cggcaccact tcccaaatcg tgtcgagcgc
      901 cgactgaagc tcactgaaga cgcccgaggc accgaagagc aggacgatga tgcccgcaat
      961 gctgctgagc agacccgccg tgggcgcttg agcgctccgc acgatggtct gcacggcttg
     1021 gccgccttca ctccccacga cgccgccgag ctcgtgcgca atcgcgccgc gcgccgactg
     1081 ctcatccacg acgaatcccg cgatggcgat ggcgagcacg acgagcggag cgagcgagag
     1141 caaagcgtaa tacgcgagtg ccgccgctag cctcagcgcg ttgtcgtcca tgaagtcgtt
     1201 gccggtggcc ttcacgagtg accacgcggc tcggaagccc ccgggctgcg agctttctcg
     1261 attcatgaaa cggacgtgct gcaaaggaag tgccagggtt ccggcagatt ctgcgactct
     1321 gcccgtgccg aactgccacg acgcgcattt tttgacgcgc ggttttcctc gacgtcgtcc
     1381 gcggcccgct ttacaccacc gtcaagatgc cctctcgcct ctggttcgga gcctgtcttc
     1441 ttgtcctgac cacctcgtgc agcggtgacg acgacgcgtc gcccggcagc ggaggtggac
     1501 aggctgcgag cggcggcagc ggcggcagcg ggcaagcgac aggcggctcg agcggcagcg
     1561 ggcagctgac ggcaggtagc ggcgggcagt ccttgggcgg cagctccggg caggcggctg
     1621 gcggcatgcc ggcgagcgcg gggcaggcgc ccacactcga ctatccgacg gacacgacgg
     1681 ccgaggggat tcaagcgttc atcgacgccg ccagttaccg cactgcgacg tgggcctcgg
     1741 gcatgaaggc gcccgaggat ccgcccatgg gcacgctgtc cccgcatggc cacgagtaca
     1801 tttggtacaa tcatgccctc cgccagtcga atagcgaggg gcacaccggg acgagctccg
     1861 ctaccggcag tatggccgtg aaagagatct acacgggcga gagcgtcgtc ggacacgccg
     1921 ccatgctcag gaccgacacc aagtggatca tgttctgcct ctcgagcgag agcgatcgct
     1981 gcttcgcggg cgcgccggcg aacacggtca cgtacacgtc gtccatcacg aactgcggct
     2041 gccatggcgg cgggacgatc atcaccgccc ctcagatgcc gcccccctga gctcgcgcga
     2101 aatcgcgcaa gctttgccgc tcccgtgact gggcggcgca agcttcacgc atttcacggc
     2161 gagcgagccg cgtgtttcgc cgtgttttcg tgcggggtac gtcgcttgct ctacccgcag
     2221 gggtgacgga agcacacgta gcgagcttcg cgctcttctc tctcctggcg ctcggctgcg
     2281 cgtcaccggg gctttcgacg gccgatacgg gcgcacgctc ggatcgtgac ttcgggctga
     2341 cggaggcgcg cgatctcgat ccaagtccgg acgtcgtctc gatcgcgctg cgagccgcgc
     2401 ccggagcgct cgagattttg cccggcaaga cgacgcccct cgcgagctac ggcggaacgc
     2461 tgcctggacc gctcatcgtc gccaaacgag gcgatcgact ggacgtgcac ttcgaaaacg
     2521 gcctgaccga gcccagcacg cttcattttc acggcatccg cttgccgaac gcgatggacg
     2581 gcgtgccgga catgacacaa gcggcggtcg cgccgggcgc cacgttcgac tactcgttca
     2641 cgctgcccga cgcgggactg tactggtacc acccgcacta cgacacgctc gccgagctcg
     2701 gcagcgggct ctacggcgcg atcttggtcg aagatccgga cgaccccgca ggcctcggcg
     2761 acgagaccgt actcgtgctc tcggacgtga gtctcgacgc cgaaggcgcg ctgctggcgc
     2821 cctcgagcga tcccacggcc gtgatcgcag gcagcgaggg caacgtcgtg ctcgtcaacg
     2881 gacgcattca cccgacgctc gacgtacaga gcggccggcg gcagcggctg cgcatcgtca
     2941 acgccgctcg cgcgcgctac ttctcgctcg ggctcgcggg gcaccgcttc gtccaaatcg
     3001 gcagcgacgg cgggcgtctg gagcagccag tgagcgtcga gaaccccgtg ctcgctccgg
     3061 ccgagcgcgt cgacctcttg ctggatccgc taggcgacgc gggcacttcg ctcgagctcg
     3121 tcgccctacc gatcgcgcgt gggttgtcgt tgccgctttc ggcgcaggtc ccgctcgtga
     3181 cgctccgagt cgtgcctgcg gagtccgctc cgtccccgcc tctgcccgcg ctgtcgcgag
     3241 ccatcacgcc gctcgacacc tccggcgccg agcaagtcac gatcgccctc acggtcgacg
     3301 aa
//
LOCUS       DATIML010000253         2283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1493714, whole genome shotgun sequence.
ACCESSION   DATIML010000253 DATIML010000000
VERSION     DATIML010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1493714"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VLJ38_04435"
     CDS             complement(<1..217)
                     /locus_tag="VLJ38_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HSU38787.1"
                     /translation="MPRNAPLVFVSAGCAAGIGPEVAVAAARRLHDTPIVLVGDIGTL
                     LAAAALLHVGEQHLVPFDGKPPRPGSIG"
     gene            complement(283..999)
                     /locus_tag="VLJ38_04440"
     CDS             complement(283..999)
                     /locus_tag="VLJ38_04440"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU38788.1"
                     /translation="MLEREEGAATTLRQLGATVRTLDLWDDPVNLIADDDDELEVRPR
                     ALVFEALDRPDLAVAALRAVRKEPYFDNVGAVIAVTVGQIARIEPSSGFDDFVLHPYV
                     PEELYGRIRALEWRRSEFATEERHKVAGIVVDKAGHEVYVDGRAVQLTAKEFALLAYL
                     CERRGKVLSREHLLARVWGNRYEGGPRTVDIHVRRLRAKLGPALPLETLRGSGYKLRS
                     PDNDEPAPRSSKEEEALETE"
     gene            complement(1049..>2283)
                     /locus_tag="VLJ38_04445"
     CDS             complement(1049..>2283)
                     /locus_tag="VLJ38_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HSU38789.1"
                     /translation="VRQGDATGYAHVEDLSWEAMQRAAETAARIASSGATPPPVRIEP
                     LTLPERYLLDVPSIDLAGKEKRALLERASRAAHAADPRIVKVSVTFAEELREVLIVTS
                     DGRMAHDVQPLLRFGVSAVAEQNGRRESGRSGGGGRKTLGYFDEKTPEWHGREAARQA
                     LVLLDARPAPAGQMPVVLAPGDSGILLHEAVGHGLEADFNRKGTSNYTGRVGQVVASE
                     LCTVVDDPTLLQSRGSINVDDEGIEPVRSVLIENGVLGGYMQDRLSASHFKVQPTGNG
                     RRESFAAAPMPRMTNTVLLAGPHDPEEIIRSVERGIYASSFGGGQVDISNGDFVFSLT
                     ESYLIENGKLTAPLKNVNLIGNGPETLREVSMLGKDVALSDGIWTCGKDGQSVPVGVG
                     CPTLKIGRITVGGTEISR"
BASE COUNT          345 a          784 c          765 g          389 t
ORIGIN      
        1 ccccgatgct gccggggcgc ggcggcttgc cgtcgaaggg cacgagatgc tgctcgccga
       61 cgtgcaggag cgcagcggcg gcgagcagcg taccgatgtc accgaccaac acgatgggcg
      121 tgtcgtgcag ccggcgcgcc gcggcgacgg caacctcggg accaatcccc gcggcgcagc
      181 cggcggacac gaacacgagc ggcgcgttgc gaggcatcca cgcggaagcc tagcaaaaag
      241 cgggcgcagg cgggcacgcg gacgcggcgc ccgcgcgcgc cgctattccg tttcgagcgc
      301 ttcctcttcc ttgctcgagc gcggcgccgg ctcatcgttg tccggcgagc gcagtttgta
      361 gcccgagccg cgcagcgttt cgagcggcag tgcggggccg agcttggcgc gcaggcggcg
      421 gacgtgaatg tcgaccgtgc ggggaccgcc ctcgtagcgg ttgccccaga cacgggcgag
      481 caggtgctca cgggagagca ccttgccacg gcgctcgcaa aggtacgcca agagcgcgaa
      541 ttccttggcc gtgagctgga cggctcggcc gtccacgtac acttcgtgtc ccgccttgtc
      601 gacgacgatg ccggccacct tgtgccgctc ttcggtcgcg aattcgctgc gccgccactc
      661 gagcgcgcgg atgcggccgt aaagctcttc gggcacgtag gggtgcagca cgaaatcgtc
      721 gaagccgctc gacggttcga tgcgtgcgat ttgacccacc gtcacggcga tcaccgcgcc
      781 gacgttgtcg aagtacggct ccttgcgcac ggcgcgcagc gccgccacgg cgaggtccgg
      841 ccggtcgagc gcctcgaaca cgagcgcgcg gggtcgcacc tcgagctcgt cgtcgtcgtc
      901 cgcgatgaga ttcaccgggt catcccagag atcgagcgtc cgcacggttg cgccgagttg
      961 acgcaacgtg gtcgccgccc cctcctcgcg ttcgagcatg ggaccatgcc cgaccacggc
     1021 gacgaagctc ttcggccggc tgagggcctt atcgagagat ttcggtgccg ccaacggtga
     1081 ttcgcccgat cttgagggtt gggcagccga cgccgactgg aacgctctgt ccatcttttc
     1141 cacaggtcca gattccatca gagagcgcca cgtcctttcc gagcatggat acttctctca
     1201 atgtttcggg accgttgccg ataaggttca cgtttttcag aggcgccgtt agcttaccgt
     1261 tttcgatgag gtagctctcc gtgagcgaga aaacgaagtc cccgttcgag atgtcgacct
     1321 gcccgccgcc gaacgagctc gcgtaaattc cgcgctcgac gctgcggatg atttcctcgg
     1381 ggtcgtgcgg tccggcgaga aggacggtgt tcgtcatgcg gggcatgggc gcggcggcaa
     1441 agctctcgcg ccggccgttt ccggtcggct gcaccttgaa gtggctcgcc gacagccgat
     1501 cctgcatgta gccaccgagg acgccgttct cgatcagcac gcttcggacg ggctcgatgc
     1561 cttcgtcgtc gacgttaatc gagcctcggc tctggagcag cgtcggatca tcgacgacgg
     1621 tacaaagctc gctggcgacc acttggccga ctcggcccgt gtagttgctc gttcccttgc
     1681 gattgaagtc ggcttccagg ccgtgaccga ccgcctcgtg cagcaaaatc ccgctgtcgc
     1741 cgggggcgag cacgacgggc atctggcccg ccggcgcggg ccgcgcgtcg agtaagacga
     1801 gcgcttggcg agcggcctct cggccgtgcc attcaggtgt cttctcgtcg aagtagccga
     1861 gcgtcttccg acccccgccg ccgctgcggc cggattcgcg ccgcccattt tgctcggcga
     1921 ccgccgacac cccgaaacgc aagagcggtt gcacgtcgtg ggccatgcgc ccgtcgctgg
     1981 tcacgatcag cacctcgcgc agttcctctg cgaaggtgac gctcactttg acgatccgcg
     2041 ggtccgcggc gtgggcggcg cgactcgccc gctcgagcag cgcgcgcttt tccttgccgg
     2101 ccagatcgat gctcggcacg tcgagcaagt agcgctccgg caacgtgagc ggctcgatgc
     2161 gcacgggcgg cggcgtcgcg cccgagctcg cgatacgcgc cgccgtctcg gccgcgcgct
     2221 gcatcgcctc ccacgaaaga tcctcgacgt gggcgtaacc ggtcgcgtcc ccttgccgca
     2281 cgc
//
LOCUS       DATIML010000254         1950 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5537805, whole genome shotgun sequence.
ACCESSION   DATIML010000254 DATIML010000000
VERSION     DATIML010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5537805"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..530
                     /locus_tag="VLJ38_04450"
     CDS             <1..530
                     /locus_tag="VLJ38_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38790.1"
                     /translation="PLFSARFKAQRVLQVAGRVADLYRGSRTRALARGAATLVTLDVG
                     TGTLQVLEGVQGTTAAKTNCANLPTQGCLTNNWGNVGTATAVGTARVIEGISQQNITT
                     TMTLPGASTLSSGTVALCFSPGGRTYVNSSGTWTADNWLPLTNVASITVADPSNSPRS
                     YNILLMPNGTARLAP"
     gene            527..1111
                     /locus_tag="VLJ38_04455"
     CDS             527..1111
                     /locus_tag="VLJ38_04455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38791.1"
                     /translation="MKRRLRGYTVVELMMSLAVFATGVTGVIAMERATITSNQQAKNV
                     AIANGIAQAWLSQLAADATLWTRTGDVTRTIWLTTITSTNDLWQLPVYNTTLQFGPQF
                     DGFGAPVAANGAFCAQIRLTWLYGDKSAQQTSGLAGNGLIRTEVRVFWPRDPTYVVAN
                     DCQNGAQGTIDDVTKALGTGMYHVVTQAGAVRQP"
     gene            1108..>1950
                     /locus_tag="VLJ38_04460"
     CDS             1108..>1950
                     /locus_tag="VLJ38_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38792.1"
                     /translation="MTRAELRQRQRPFAAAPGFTLVELMVALSGGLFLSIVVFALARD
                     ASRFYQREGRIASATLAGMIGFERLKADISRAGYLGTPNIQLDPQRAVNVSASTPAGI
                     FTLASLRLTPNIPDLSSIPAFASQGLTPDQIVLSGSYSATDEFPAVVDPSGQTIYLQM
                     NTPSMARLGYLSAGSASAQLALLKNVFGASPGLILRFKDQAGKLYFGEISSITAGSPP
                     AIALTSAFPQRSSATGVNGLRGFEDGSSANVVNIVRYRVMDLQNDAQGPTWQALFDAS
                     KGAPG"
BASE COUNT          343 a          675 c          617 g          315 t
ORIGIN      
        1 tgccgctctt cagcgcgcgc ttcaaggccc agcgcgtgct ccaggtggcc ggtcgtgtcg
       61 ccgatcttta ccgtggttca cgcacgcgag ccctggcacg tggagcggcc acgctcgtca
      121 cgttggacgt cggcaccggc acgctccagg tgctcgaagg ggtccaaggg acgacagcgg
      181 ccaagaccaa ctgcgcgaac ttgccaacgc aaggctgcct cacgaacaac tggggcaacg
      241 tcgggacggc gacggcagtc gggacggcgc gcgtcatcga aggcatcagt cagcagaaca
      301 tcacgacgac gatgacgctg ccgggtgcca gcacgctgag ctcaggcacg gtcgcgctct
      361 gcttcagccc gggcgggcgc acctacgtga actcgagcgg cacgtggacc gcggacaatt
      421 ggctcccgct cacgaacgtc gcgagcatca ccgttgcgga tccgagcaac agtccccgct
      481 cgtacaacat tttgctcatg ccgaacggca cggcgaggct cgcgccatga agcgacggct
      541 tcgcggttac accgtcgtcg agctcatgat gtcgctcgcc gtcttcgcga cgggcgtcac
      601 gggcgtcatc gccatggaac gggcgacgat cacgtccaat caacaggcga agaacgtcgc
      661 catcgcgaac ggcatcgcgc aggcgtggct cagccaactc gccgccgacg cgacgctctg
      721 gacgcgcaca ggcgacgtga ctcgcacgat ttggctcacg acgatcacgt cgacgaacga
      781 tctctggcaa ttgcccgtct acaacacgac cctgcagttc ggcccgcagt tcgacggctt
      841 cggcgcgccg gtcgcggcaa acggcgcttt ttgcgctcaa atccgcctca cctggcttta
      901 cggtgacaag agcgcgcagc aaacgagcgg gctcgcgggc aacggcctga ttcgcaccga
      961 ggtgcgcgtg ttttggccgc gcgacccgac gtacgtcgtg gcgaacgact gccagaacgg
     1021 cgcgcaaggc accatcgacg acgtcacgaa ggcgctcggg accggcatgt accacgtcgt
     1081 cactcaggcg ggcgcggtgc gacaaccatg acgcgcgcgg agcttcgtca acggcagcgg
     1141 ccattcgccg cggcgccggg gttcacgctg gtcgagctga tggtcgcgct ctcgggcggt
     1201 ttgtttctct cgatcgtcgt gttcgctctc gctcgcgacg cgtcgcgctt ttaccagcgt
     1261 gaaggtcgca tcgcgagcgc cacgctcgcc ggcatgatcg gcttcgagcg actgaaggcc
     1321 gacatcagcc gcgccggcta cctcggcacg ccgaacattc agctcgaccc gcagcgcgcg
     1381 gtcaacgtct ccgccagcac gcccgccggg attttcacgc tcgcatcgct gcgcctgacg
     1441 cccaacatcc cagatctaag ctcgattccc gcgttcgcga gtcaaggcct gacccccgat
     1501 caaatcgtgc tctcgggttc gtattcggcg accgacgagt ttccggccgt cgtcgatccg
     1561 tcggggcaaa ccatctacct gcagatgaac acgccgtcga tggcgcgcct cggctacttg
     1621 agcgcaggca gcgcgtcggc acagctcgca ctgctcaaaa acgtgttcgg cgcatcgccc
     1681 ggcctcatcc tccgcttcaa ggatcaagcg ggcaagctct acttcggcga gatctcgtcg
     1741 atcacggcgg gctcgccgcc ggccatcgcg ctcacgtcgg catttcccca gcgctcgagc
     1801 gccacgggtg tgaacgggct gcgcggcttc gaggacggct cgagcgccaa cgtcgtgaac
     1861 atcgtgcgct accgcgtgat ggatctgcag aacgatgcgc agggcccgac atggcaagcg
     1921 ctcttcgatg cgagcaaggg cgcgccgggc
//
LOCUS       DATIML010000255         1944 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3803675, whole genome shotgun sequence.
ACCESSION   DATIML010000255 DATIML010000000
VERSION     DATIML010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3803675"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..955)
                     /locus_tag="VLJ38_04465"
     CDS             complement(<1..955)
                     /locus_tag="VLJ38_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38793.1"
                     /translation="MRLGPTWTKCLGLCLALATEARAQTAAPIKTNDYAIDLTQGPVL
                     ASNRVIGLAGAFVAMADGVDGDTQNPAAPAVRTTYSFTDVDYDIGAGLVFPGGLGRSG
                     DFFNSGSKTKVVAGNNVYVFLSGAFNLQIDRLGFGVTIDLQQYSLRRSAEPTLTSLTS
                     QIMVTHLLAAYAFADDQLVIGTGARVVALDVSTRATFLSNGVNSLNTRGVGAELGFIW
                     RPNNERIRLGGAFRSTVSADAQGKTLYSGTPDELYLPSHITLPWELNLGTAVQLGSRP
                     LNPPWVSPRELLAHKRRYLEWQARERERRTREALKRARAESR"
     gene            999..>1944
                     /gene="thrC"
                     /locus_tag="VLJ38_04470"
     CDS             999..>1944
                     /gene="thrC"
                     /locus_tag="VLJ38_04470"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSU38794.1"
                     /translation="MPYRAEFRCFNGCEGSYAVTEPIYRCPKCDGLLQVVHDVEALAD
                     RSGPVWMKLFDERYRQNSWPYGSGVWGKREWVMPQVPDETIVSMYEGGTNLFWAERYG
                     KQIGLDDLWVKLCGNSHSGSFKDLGMTVLVSVVRMAIQQGLKVKAIACASTGDTSASL
                     AAYGAAAGLPVVVLLPYGKISTAQLVQPLAHGALVLGLDTDFDGCMAIVQRLAAEGIV
                     YLANSMNPLRIEGQKTVAIEIVQQFDWQIPDWVILPSGNLGNASALYAGFKLLKDLGI
                     IARYPRLVVAQAENANPLYRAWSAGKRTVDAIVARPTLA"
BASE COUNT          314 a          631 c          660 g          339 t
ORIGIN      
        1 cgcgactctc cgcgcgtgcg cgcttgagcg cctcgcgcgt tcggcgctcg cgctcgcgcg
       61 cctgccactc gaggtagcgc cgcttgtgcg cgaggagctc gcgcgggctc acccacggcg
      121 gattgagcgg gcggctgccg agttggactg ccgtgccgag gttcaattcc cacggcagcg
      181 tgatgtgcga gggcaagtag agctcgtcgg gcgtgcccga gtacagggtt ttaccttggg
      241 cgtccgccga cacggtcgaa cgaaaagcgc cgccgagtcg aatgcgttcg ttgttcgggc
      301 gccagatgaa gccgagctcg gcgcccacgc cgcgggtgtt gagcgagttg acgccgttgc
      361 tcaggaaggt cgcgcgtgtg ctcacgtcga gcgcgacgac gcgtgcgccc gtgccgatca
      421 cgagctggtc gtcggcgaag gcgtaggccg ccagcaggtg cgtgaccatg atctggctcg
      481 tgagcgaggt gagggtcggc tcggcgctgc ggcgcaagct gtactgctgg agatcgatcg
      541 tcacgccgaa gccgaggcgg tcgatttgca ggttgaacgc gccgctcaga aacacgtaga
      601 cgttgttgcc ggcgacgacc ttggtcttgc tgcccgagtt gaagaagtcg cccgagcgcc
      661 cgagtccgcc cgggaagacg agcccggcgc cgatgtcgta gtccacgtcc gtgaacgagt
      721 aggtcgtgcg gacggccggg gctgccggat tttgggtgtc gccgtccacg ccgtccgcca
      781 tcgcgacgaa agcccccgca aggccgatga cccggttgct cgcgaggacc ggcccttgcg
      841 tcaaatcgat ggcatagtcg ttggttttaa tcggcgccgc cgtttgggcg cgggcttccg
      901 tagcgagcgc gaggcagagc ccgagacatt tcgtccaggt cgggccgagg cgcatgcgcg
      961 cgcctaccat agccccgatc cacgagtata gtccgcacgt gccctaccgt gccgagttcc
     1021 gctgcttcaa tggctgcgag ggatcgtacg ccgtcaccga gcccatttac cgctgtccga
     1081 aatgcgacgg cctgctccag gtcgtccatg acgtggaagc gctcgccgat cgcagcggcc
     1141 ccgtctggat gaagcttttc gacgagcgct atcgccaaaa ctcctggccc tacggctccg
     1201 gggtttgggg caagcgtgaa tgggtcatgc cgcaggtgcc cgacgagacc atcgtctcga
     1261 tgtacgaggg cggaacgaac ctgttttggg ccgagcgtta cggcaaacag atcggtctcg
     1321 acgacttgtg ggtgaagctt tgcggcaaca gccacagcgg ctcgttcaag gacctcggca
     1381 tgacggtgct cgtgagcgtc gtgcgcatgg ccattcagca ggggttgaag gtcaaggcca
     1441 tcgcctgcgc ttcgacgggc gacacgagcg cgtcactcgc agcctacggc gcagccgccg
     1501 ggctccccgt cgtcgtgctc ctgccctacg gcaaaatttc gacggcccag ctcgtgcagc
     1561 cgctcgctca cggcgccttg gtgctcggcc tcgacaccga tttcgacggc tgcatggcga
     1621 tcgtgcagcg cctcgcggcc gagggcatcg tgtacctcgc caactcgatg aaccccctgc
     1681 gcatcgaggg gcagaagacg gtcgcgatcg agatcgtcca gcaattcgac tggcaaatcc
     1741 ccgactgggt gattttgccg agcggcaatc tcggcaatgc ctccgcgctc tacgccggct
     1801 tcaagctctt gaaggacctc ggcatcatcg cgcgctaccc gcggctcgtg gtcgcacagg
     1861 ccgagaacgc caatccgctc taccgcgcct ggagcgcggg caagcgcacg gtcgacgcga
     1921 ttgtcgcgcg gccgacactc gcga
//
LOCUS       DATIML010000256         4029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5537963, whole genome shotgun sequence.
ACCESSION   DATIML010000256 DATIML010000000
VERSION     DATIML010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5537963"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            107..982
                     /gene="mutM"
                     /locus_tag="VLJ38_04475"
     CDS             107..982
                     /gene="mutM"
                     /locus_tag="VLJ38_04475"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:NF002211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HSU38795.1"
                     /translation="MPELPEVEVTRRAVAPSIIGRRIARVRTTAPSYFFLTPPARLKR
                     SLTGRKVVELERHGKYLVALLDDDTRLLLHLGMTGQLFASGARSVRLLSAERRSMLGP
                     GAQPDFRPDEHTHLTLEFADGPPALYFRDVRKFGKCALLARDASDPRLEKLGVDALVA
                     TGDELFAAARRRKSPIKSLLLEQAVIAGIGNIYADEALYLAKIHPTRPACDVGLKECK
                     ALVRAARRVLERAIVQGGSSIDDFVRPDGSDGQYQKERKVYAREGEACSRCRTAIERI
                     VIGQRSAHFCPQCQR"
     gene            1029..1733
                     /gene="rpiA"
                     /locus_tag="VLJ38_04480"
     CDS             1029..1733
                     /gene="rpiA"
                     /locus_tag="VLJ38_04480"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF001924.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HSU38796.1"
                     /translation="MDADAAKRLAAQAAADLMPEEGVIGLGTGTTTRFFINEVGRLVG
                     EGRKFSAVPTSRRSRELATSLQIPLLDDSGPWTIDVCVDGADEVSMELDLIKGGGGAQ
                     TREKIVNRHSRQNVIIVDETKLSQRLGQKRAVPVEVVVFGHRATGAALSRFGDASLRF
                     AGDNPFVTDSGNYIYDVETGPISDPVELEEEFRHLPGVIETGLFCGRADIVIVAGAGG
                     VELWHRDGRRMPAGAR"
     gene            1779..2963
                     /locus_tag="VLJ38_04485"
     CDS             1779..2963
                     /locus_tag="VLJ38_04485"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HSU38797.1"
                     /translation="MGSAALALAAISVAAPKGAASAAPASSTPHAASSTVPGGAPPHG
                     SATAPHASATAPHASAATPHASATAPHGSATAPLASATAPLAAPAPTAAAGAPPASGS
                     TTEDRAALASRVVVLERAGKALGLGVILNGDGRVLTALSSLGNAQHLDVRYADDKLVP
                     ARVGHADRAHDLALVVPANGEHQLGLRAARDPSAALHAPLGTFVVAGRKAAPGPLLTP
                     TGPVAFTGNDGKPFPEALGFKTPPNATSLGSPLVDTNSEVIAVVTRACQKKAASGCTP
                     VFVGTPVSVVREFLHSAPKTASVPTASLGVQVAPDDAGSARGLRITAVRGSAVALGLR
                     AGADARTADLIVALDGVPVTTSEAFDRIVQDHAVGDVVDLLVLGAGRYRHVTVVVSPA
                     PR"
     gene            3095..3868
                     /locus_tag="VLJ38_04490"
     CDS             3095..3868
                     /locus_tag="VLJ38_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HSU38798.1"
                     /translation="MSSLLRIEVAGQTDVGRKRAHNEDNFAIMAEYGLYVVADGMGGH
                     ASGEIASKMAVDTLHEFFTATADDPERTWPYKMDRSKGYEENRLVTGIKLCNLRIYEQ
                     AQRNAKQRGMGTTLAALFAVEDGIYVAHVGDSRVYRIRDRNIEQLTEDHSLLNDYKKM
                     KHLTPEEIANFPHKNVIVRALGMKDTVKVDTRFEAPRAGDAMVLCSDGLCGPISDERM
                     LEVVLGSPDLPTATQRLIDAANENGGPDNITCVVARWIQ"
BASE COUNT          661 a         1437 c         1341 g          590 t
ORIGIN      
        1 ttcttctacc tcgtgcgcaa acccgacgtc acgaccggga cgccgcgtga gcccgacgcg
       61 accgccgaga cggcgcgcaa acccgacgtg accgccgcgc cttgacatgc ccgaactgcc
      121 cgaagtcgaa gtcacccgcc gcgccgtcgc gccgagcatc atcggccgcc gtatcgcgcg
      181 cgtgcgcacg accgcgccga gctacttctt cctcacgccg ccggctcggc tcaagcgctc
      241 gctcacggga cgcaaagtcg tcgagctcga gcggcacggc aagtacttgg tcgctctgct
      301 cgacgacgac acgcgcttgc tcctgcacct cggcatgaca gggcagctct tcgcctccgg
      361 cgcgcgcagc gtgcggctgc tgtccgccga acgccgcagc atgctgggcc ccggcgccca
      421 acccgacttt cgacccgacg agcacacgca cctcacgctc gagttcgccg acggcccgcc
      481 cgcgctctac ttccgcgacg tgcgtaagtt cggaaaatgc gcgctgctgg cgcgcgacgc
      541 gagcgaccca cgactcgaaa agctcggcgt cgacgcgctc gtggcgacgg gcgacgaact
      601 gttcgcggcc gcacggcggc gcaagtcacc gatcaaatcg ctcttgctcg aacaagcggt
      661 gatcgccggc atcggcaaca tctacgcgga cgaagcgctg tacctggcga aaattcatcc
      721 gacgcgcccg gcgtgcgacg tcggcctgaa ggaatgcaaa gcgctcgtgc gggcggcgcg
      781 gcgcgtgctc gagcgcgcca tcgtgcaggg cggttcgtcc atcgacgact tcgtgcggcc
      841 cgacgggtcg gacggccagt atcagaagga gcgcaaggtg tacgcgcggg aaggcgaggc
      901 gtgctcgcgt tgccgcacgg cgatcgagcg catcgtgatc ggccagcgct cggcgcattt
      961 ctgcccgcaa tgtcagcgct gatcgcgcgc tcaccccggg tggaggtgcg ctgctataag
     1021 ctccggcgat ggacgccgac gcagccaaac gcctcgcggc acaagccgcc gccgatctga
     1081 tgcccgaaga gggcgtgatc ggactcggca cgggcacgac gacgcgcttc ttcatcaacg
     1141 aagtcggccg actcgtgggt gaaggtcgca aattttcggc ggtgccgacg agccgccgta
     1201 gccgcgagct cgcgacctcg ctccagatcc cgctgctcga cgattcgggt ccctggacca
     1261 tcgacgtctg cgtcgacggc gcggacgaag tcagcatgga actcgatttg atcaagggcg
     1321 gcggcggcgc gcagacccgg gaaaaaatcg tcaatcggca ctcgcgccag aacgtcatca
     1381 tcgtcgacga gacgaagctc agccagcggc tcgggcaaaa gcgcgccgtg cccgtcgagg
     1441 tcgtggtgtt cgggcatcgt gcgacgggcg cggcgctcag tcgcttcgga gacgcgtcgc
     1501 tacgttttgc gggcgacaac ccgttcgtca ccgactccgg caactacatc tacgacgtcg
     1561 agacgggccc gatcagcgat ccggtcgagc tcgaagagga atttcgtcac ttgccggggg
     1621 tgatcgaaac gggcttattt tgcgggcggg ccgacatcgt gatcgtcgcc ggcgcggggg
     1681 gcgtcgagct ctggcaccgc gacgggcggc gcatgcccgc gggggctcgc taggttacac
     1741 tcggggccgt gaggcaccct cgcttcgttt tcgctctcgt gggttcagcg gcgctcgcac
     1801 ttgccgcgat cagtgtcgcc gcgcccaagg gcgctgcgtc ggcggcaccg gcgagctcga
     1861 cgccacacgc ggcgtcctcg acggtaccag gcggagcccc gccgcacggg tccgccacgg
     1921 cgccgcacgc ctccgcgacc gcgccgcacg cctccgccgc cacgccgcac gcctccgcga
     1981 ccgcgccgca cggctccgcg accgcgccgc tcgcctccgc gaccgcgccg ctcgccgcgc
     2041 ccgcccccac agctgcagcg ggcgcgccgc ccgccagcgg cagcacgact gaggatcgcg
     2101 ccgcactcgc gtcgcgcgtg gtggtgctcg agcgcgcggg caaagcgctc ggcctcggcg
     2161 tgatcctgaa cggcgatgga cgcgtgctca ccgcgctttc gtcactcggc aacgcccagc
     2221 acctggacgt gcgctacgcc gacgacaagc tcgttcctgc ccgggtcggc cacgccgatc
     2281 gcgcccacga tctcgcgctg gtcgtgcctg caaacggcga acatcagctt ggactcagag
     2341 ccgcacgcga cccgagcgcc gcgctgcacg cgccgctcgg cactttcgtc gtcgcggggc
     2401 gcaaggccgc gccgggcccg ctgctcacgc cgaccgggcc cgtcgccttc acgggcaacg
     2461 acggcaagcc gtttcccgaa gcgctcggct tcaagacgcc gccgaacgcg acgagcctcg
     2521 gcagtccgct cgtcgacacg aacagcgaag tgatcgccgt cgtcacgcgc gcctgtcaga
     2581 agaaggccgc ctcgggctgc acgcccgtgt tcgtcggtac gcccgtgagc gtcgtgcggg
     2641 agttcctgca ctcggccccg aaaaccgcct ccgtgccgac ggcgtcgctc ggcgttcagg
     2701 tcgcgcccga cgacgccggc agcgcgcgcg gtctgcgcat taccgcggtt cgcggatcgg
     2761 ccgtggcact cggcctgcgg gcgggtgcag acgcgcggac ggccgacctg atcgtcgccc
     2821 tcgacggcgt acccgtgact acatcggagg ccttcgatcg aatcgtgcaa gatcacgcgg
     2881 tgggcgacgt cgtggatctg ctcgtgctcg gcgccggacg ctatcggcac gtgacggtcg
     2941 tcgttagccc ggcaccgcgc taacggcccc acggagagct tcgcgacccc gctcgagcga
     3001 aacggcccgc gcgccggcac gccgctaatt gacagaggaa tccagtgagg cgactatccc
     3061 gcgaacgtgg ccccacgagg gcagcgtagt tgccgtgtcg agcctcctca gaatcgaagt
     3121 agctggccag accgacgtcg gccggaagag ggcccataac gaggacaatt tcgccatcat
     3181 ggcggagtac ggcctctacg tggtcgccga cggcatgggc ggtcatgcgt cgggcgagat
     3241 cgcgtcgaag atggcggtcg acaccttgca cgagttcttc accgcgaccg ccgacgatcc
     3301 ggagcgcacg tggccctaca agatggatcg ctccaaaggc tacgaagaga atcgcctcgt
     3361 taccggcatc aagctctgta acttgcgcat ctacgagcag gcccagcgca acgcgaagca
     3421 gcgcggcatg ggcacgacgc tcgcggcgct cttcgcggtg gaggacggca tctacgtcgc
     3481 gcacgtcggc gacagccgcg tgtatcgcat tcgcgatcgc aacatcgagc agctcaccga
     3541 ggatcactcg ctgctcaacg actacaagaa gatgaagcac ctcacgcccg aggagatcgc
     3601 gaactttccg cacaagaacg tgatcgtgcg cgcgctcggc atgaaggaca ccgtcaaggt
     3661 cgacacgcgc ttcgaggcgc cgcgcgccgg cgacgccatg gtgctctgca gcgacggtct
     3721 gtgcggcccg atcagcgacg aacgcatgct cgaggtcgtg ctcggctcgc ccgatctgcc
     3781 gaccgccacg cagcgcctga tcgacgccgc gaacgaaaac ggcggccccg acaacatcac
     3841 ctgcgtcgtc gcccgctgga ttcagtaagc gcgaatcgtc gactggttcc gcgttcgaga
     3901 ttttttgggg ttcgcgttgc tgcgcgcggg gcgcgcgagc aacctcggat tgcgtcgccg
     3961 ctgagcgcgt acgtcagcgc gggatgatct gaatcggcgc gggttgattg cgcacaggct
     4021 cggggctgc
//
LOCUS       DATIML010000257         3059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3803723, whole genome shotgun sequence.
ACCESSION   DATIML010000257 DATIML010000000
VERSION     DATIML010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3059
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3803723"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..371
                     /locus_tag="VLJ38_04495"
     CDS             <1..371
                     /locus_tag="VLJ38_04495"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38799.1"
                     /translation="QTWHALGLVCLNLRDFRAADWAYRSGLMADPRAIENHVGLATLA
                     LVQERPDAALREYDAVLAERPNRTDALLGRSLALIELRRFDEAEATLAEAEKRGGDRG
                     VIAKQRRLVSALRTGVKLEH"
     gene            490..>3059
                     /locus_tag="VLJ38_04500"
     CDS             490..>3059
                     /locus_tag="VLJ38_04500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38800.1"
                     /translation="MDSQTIRTVLGKLQGEPDTEASWSLLRSAVSEPGGDLSKDELQR
                     LLTAARERHAARGEWEAVAQLLEIAVGAAAGTDAELGLLREQAQVQKQHLFDDEAAAV
                     TYLHVFELDPKDQDASREVDELETKRGHSAELAQKYLDEIPQASDDAYKSSLLLHAAE
                     MDVRYGGGADLTTAIERLEQAVRLDPANERAGALLELVHRRAGRWEDVAFVLERLADR
                     AEQPAERAAAGVRLARVHAQHLSDQERAARAYEGVLRVAPSYPEAINYLTNFYSTNER
                     WAELVALYERELAVKKLNETELVGDMLQIAMLYWKKLGHARAADPWFTRIAKVEPANE
                     AMLAFYREYCSSLGDDGRLMDMLGAAQRSLKDGSKEKTAIASELGRLAEGQANAQKAI
                     EQYKAVLRNDPDNTEAREKLKGFYKQTQSHNALVELLRQQLERLPADAYQARLAVLRE
                     VATIYREYIKNDTALLSVLNQIVQLDDKLDEHDVGEMREIVTLYDRLGRARDMITYQL
                     KLAEITPDLEEKKELYRLAGRRWLEQFSNAQNAADAYAALLKLDPKDREARERLEELY
                     RKRRAWSQLYGLFQIEHSDALGPMRAALGLEMAQLASERLNRGDDAVRLYREILASDP
                     GRLDVLDALERHSERAKDWASLADALERRAEAVTDDAARLVVLQKLGTVYAEHLSDPK
                     SAAKAWRRVLELQPGHQRALRVLRDACLASGDFDGLTELYATQNDFEGLAEVLSTAAD
                     RAKDPAVKIDLSYRAAAVFETRLHMPERAFRSYERVLATDPSDTRAVRALIPLYEKDE
                     KWGRLPALYEQLVERAATVEEKLELLARLVEISGKQLSDRRAAANYARRAYELAPDSP
                     V"
BASE COUNT          546 a         1018 c         1043 g          452 t
ORIGIN      
        1 cccaaacgtg gcacgcgctc ggcttggttt gcctcaatct ccgcgatttt cgcgccgcgg
       61 attgggcgta ccgctccggc cttatggccg accctcgagc gatcgagaac catgtcgggc
      121 tcgcgacgct cgcgctcgtg caggagcggc ctgacgcagc gctccgcgag tacgacgcgg
      181 tgctggccga gcgtccgaac cgtaccgacg cgctgctcgg ccggtcgctc gcgctcatcg
      241 agctccggcg cttcgacgaa gccgaggcca cgctggcgga agcggagaag cgaggaggcg
      301 atcgcggcgt catcgccaag cagcggcggc tcgtgagcgc gctccgcacc ggcgtgaagc
      361 tcgagcactg aagcgcgaaa acctcctctg tttccgcggc tttcatgcct tgtaacggtg
      421 cgcgccgcgg cgtagtctgc tcgtcccttc gaggcgcgcg gtcgctcttc gacgacacaa
      481 gtgggtgaca tggattctca gacgatccga accgtactcg ggaagctgca gggggagccg
      541 gacaccgagg cgagctggtc tctgctcagg tcggcagtga gcgagcccgg cggggatctc
      601 tccaaggacg agcttcagcg actcctcacc gcggcgcgcg agcgacacgc ggcccgtgga
      661 gaatgggaag cggttgcaca actgctcgag attgccgtcg gggcggcagc ggggacggac
      721 gccgagcttg gacttttgcg cgagcaggcc caggtgcaaa agcagcacct cttcgacgac
      781 gaagccgcgg ccgttacgta tctgcacgtc ttcgagctcg accccaagga ccaggacgcg
      841 agccgagagg tggacgagct cgagacgaag cgcggacact cggccgagct cgcgcagaag
      901 tacctcgacg aaattccgca ggcgagcgac gacgcgtaca agagctcgct cttgctgcac
      961 gccgcggaga tggacgtgcg ttacggcggc ggcgcggatc tgacgaccgc gatcgagcgg
     1021 ctcgaacaag ccgtacggct cgatccggcg aacgagcgcg cgggcgcgct gctcgagctc
     1081 gtgcaccggc gcgcgggacg ctgggaggac gtggcgttcg tgctcgagcg actcgccgat
     1141 cgcgccgagc aaccggcgga acgcgcggcg gctggcgtgc gcctcgcgcg cgtgcacgcg
     1201 cagcacctgt cggatcagga gcgtgcggcg cgcgcttacg agggcgtgct ccgggtcgcg
     1261 ccgagctacc ccgaggcgat caattacctg acgaactttt actcgacgaa cgagcgttgg
     1321 gcggagctcg tggcgctcta cgagcgcgag ctcgccgtga agaagctgaa cgagacggag
     1381 ctcgtcggcg acatgctcca gatcgcgatg ctgtactgga agaagctcgg gcacgcgcgc
     1441 gcggccgatc cctggtttac ccggatcgcg aaggtcgagc cggcgaacga agcgatgctc
     1501 gccttctatc gcgaatattg cagctcgctc ggcgacgacg gccgcttgat ggacatgctc
     1561 ggcgcggctc agcgctcgct caaggacggg tcgaaggaga agaccgcgat cgcgagcgag
     1621 ctcgggcgtc tcgccgaagg gcaggcgaac gcgcaaaagg cgatcgagca atacaaggcg
     1681 gtcctgcgca acgatcccga caacaccgaa gcgcgcgaga agctcaaggg gttttacaag
     1741 cagacgcaga gccacaacgc gctcgtcgag ctcttacgcc agcagctcga gcgcttgccc
     1801 gccgacgcgt accaagcgcg gctcgccgtc ttgcgcgagg tcgcgacgat ttatcgcgag
     1861 tacatcaaga acgacacggc gctcttgagc gtgctcaacc aaatcgtcca gctcgacgac
     1921 aagctcgacg agcacgacgt gggcgagatg cgcgagatcg tcacgctcta cgatcgactc
     1981 ggtcgcgcgc gcgacatgat cacctaccag ctcaagctcg ccgagatcac gcccgatctc
     2041 gaggagaaga aggagctcta tcggctcgca ggtcgccgtt ggctcgagca attctcgaac
     2101 gcacagaacg cagccgacgc ctacgcggcg ctcctcaagc tcgatccgaa ggatcgcgaa
     2161 gcgcgcgagc gcctcgagga gctctaccgc aagcgccgcg cgtggtcgca gctctacggc
     2221 ctgttccaga tcgagcactc cgacgcgctc ggtccgatgc gcgcggcgct cgggctcgaa
     2281 atggcgcagc ttgcctccga gcgcttgaac cgcggcgacg acgccgtgcg tctctatcgc
     2341 gagatcctcg cgagcgatcc gggccggctc gacgtgctcg acgcgctcga gcgtcattcc
     2401 gagcgcgcca aggattgggc ttcgctcgct gacgcgctcg agcggcgtgc ggaggccgtc
     2461 acggacgacg ccgcgcggct cgtcgtcctg cagaagctcg gcaccgtcta cgccgagcac
     2521 ctgagcgacc ccaagtccgc ggcgaaagcg tggcggcgtg tgctcgagct ccagccgggg
     2581 caccagcgcg ctctgcgcgt cttgcgtgac gcgtgccttg cgagcggcga cttcgacggc
     2641 ctcacggagc tctacgcgac ccagaacgac ttcgaaggac tcgcggaagt gctcagcacc
     2701 gcggccgatc gcgcgaaaga tccggcggtc aaaatcgacc tgtcgtatcg cgcggccgcg
     2761 gtcttcgaga cgcgcttgca catgcccgag cgcgcctttc gctcttacga acgcgtgctc
     2821 gcgaccgatc cgagcgacac gcgcgccgtg cgtgccctga tcccgcttta cgagaaagac
     2881 gaaaagtggg gccgcctgcc cgcgctctac gagcagctcg tcgagcgcgc ggcgaccgtc
     2941 gaggagaagc tcgagctctt ggcgcgcttg gtcgagatct cgggcaagca gctgtccgat
     3001 cgacgcgcgg cggcgaatta cgcgcggcgc gcttacgagc ttgcgcccga tagccccgt
//
LOCUS       DATIML010000258         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1783806, whole genome shotgun sequence.
ACCESSION   DATIML010000258 DATIML010000000
VERSION     DATIML010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1783806"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1603
                     /locus_tag="VLJ38_04505"
     CDS             <1..>1603
                     /locus_tag="VLJ38_04505"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HSU38801.1"
                     /translation="ALERFFEHVPRDSGMAFVVVQHLSPDFKSLMDEILGRRTSVPIR
                     LVEDAMAVEANHIYLIPPKKEMIISGGRLLLSERDRDQELSLPIDVFFRSLAQDCGPR
                     AVAVVLSGGGSDGSRGIRAVHEAGGLVVVQDVESAQFDGMPKTARDVGVADFVLPPQD
                     MPAALLEHAQRAGKPPESTPDSEHGMSAVYRMLEQEFGIDFTHYKPSTITRRIERRLQ
                     LSHVQDIDSYVQKLKGEHRELDVLYRDLLIGVTRFFRNDEAFDILEREVLPELLKAGP
                     ADTPFRVWVAGCATGEEVYSLAILLSELTRESGRQFKIFATDVHRGSLEHATRALYDE
                     DAVANVSPERLERYFLPRGKSYQIVPDLRQTVVFAHHNVIRDAPFTRVDLVSCRNMLI
                     YLQPAAQEKVLSLFHFALNRGGVMFLGPSESLGHLDHDFETIHKNWRIYRKYSDTRMP
                     VEPRSAQLGKATPGAAGTRSSGGIMAGALGPARYSVTQLLGTYDALLEELMPPSLLID
                     DRGELVHTFGGAARFLKLRDGRQGLD"
BASE COUNT          273 a          545 c          511 g          274 t
ORIGIN      
        1 gcgctcgagc gcttcttcga gcatgtcccg cgcgacagcg gcatggcctt cgtcgtcgtg
       61 cagcacctct cgcccgactt caagagtctg atggacgaga tcctcgggcg ccgcacctcg
      121 gtgcccattc ggctcgtcga ggacgcgatg gccgtcgagg ccaatcatat ttatctgatc
      181 ccgccgaaaa aagagatgat catctccggc ggacgactcc tgctcagcga acgcgatcgc
      241 gatcaggagc tgtcactgcc gatcgacgtg ttcttccgct cgctcgcgca agattgcggg
      301 ccgcgcgccg tcgcggtcgt gctgtccggc ggcggcagcg acggatcacg cggcatccgc
      361 gccgtgcatg aagccggcgg tctcgtcgtg gtgcaggacg tggagagcgc ccagttcgac
      421 ggcatgccga agacggcgcg ggacgttggc gtcgcggact tcgtgttgcc gccccaggac
      481 atgcccgcgg cgctgctcga gcacgcgcag cgagcgggca agccgccgga aagtaccccc
      541 gattccgagc acggcatgag cgcggtctat cgcatgctgg agcaagaatt cggcatcgat
      601 ttcacccact acaagccgag caccatcacg cgccgcatcg aacggcgact gcagctctct
      661 cacgtccagg acatcgattc gtacgtgcag aagctcaagg gcgagcaccg cgagctcgac
      721 gtgctctatc gcgacttgct catcggcgtg acgcgctttt ttcgcaacga cgaggcgttc
      781 gacatcctcg agcgcgaagt cttgcccgag ctcttgaagg cgggccccgc cgacacgccc
      841 tttcgcgttt gggtggccgg ctgcgccacg ggcgaagaag tgtattcgct cgccatcctc
      901 ttgagcgagc tcacgcgcga gagcggccgg caattcaaga tcttcgcgac ggacgtgcat
      961 cgcggctcgc tcgagcacgc gacgcgcgcg ctctacgacg aggacgccgt cgcgaacgtc
     1021 tcgcccgaac ggctcgagcg ctatttcttg ccgcggggca agtcctacca aatcgtgccg
     1081 gatttgcggc agaccgtcgt cttcgcgcac cacaacgtga tccgcgacgc gccgttcacg
     1141 cgcgtggatc tcgtgagctg ccgcaacatg ttgatttacc tgcagcctgc cgcgcaggag
     1201 aaggtgctga gcctgtttca cttcgcgctg aatcgcggcg gagtgatgtt tctgggcccg
     1261 agcgagagtc tcggccacct cgaccacgac ttcgagacga tccacaaaaa ctggcgtatt
     1321 taccgcaagt acagcgacac ccgcatgccc gtcgagcccc gctcggccca gctgggcaaa
     1381 gcgaccccgg gcgcggccgg cacgcgctcg agcggcggca tcatggcggg agcgctcggc
     1441 ccagcgcgct actccgtcac ccagctgctc ggcacgtacg acgcgctctt ggaagagctg
     1501 atgccgccga gcctgctgat cgatgatcgc ggcgagctcg tgcacacctt cggcggggcc
     1561 gcgcgtttct tgaagctccg cgacgggcgc cagggcctcg acg
//
LOCUS       DATIML010000259         2048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5249618, whole genome shotgun sequence.
ACCESSION   DATIML010000259 DATIML010000000
VERSION     DATIML010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5249618"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..883)
                     /locus_tag="VLJ38_04510"
     CDS             complement(<1..883)
                     /locus_tag="VLJ38_04510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38802.1"
                     /translation="METLVQRLVQNPHDQDAIRQAHSAGQRDPKSYAMLLEKVGTATA
                     DPAFACHWLTEAANVWSVTLADAHRAARALMIAIDRDPTQQTPADRLADLYREKGDTK
                     ALVALLERRAKALAPLAQQDPNVRGQLALLHEELGRLWSAEPLSQPSKAIENYRRAVE
                     LDPGNQFAIYSVRELLKAAEQWGEAVPYFEMELRLVDDRERRIALRQDEGEVRRSARD
                     FMGAVQAFREARTMEGGADPSLRTLLGTAILEWEQSGQRVGAQDANEGAQLFVSLAEE
                     YPGEHGLSYSLCALELEP"
     gene            complement(1024..>2048)
                     /locus_tag="VLJ38_04515"
     CDS             complement(1024..>2048)
                     /locus_tag="VLJ38_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU38803.1"
                     /translation="AFWRAQVGDDVTLFEAKPELGGQLCTIRDAGFVVEQGAEGFVAG
                     SEAVARLAEELGIATSLVGQLTHKSYAFDGQGLHELARGEAAQFLGFQVPRRELGQGI
                     RAFRDGMGEVVSALARVLGPTVDLRVRSPVKGLTPRGSRLELAAGEGKQEFERVFVAT
                     GAHAAGRLLAPVFGAVAAALERSATLSSVTVSLAYRRAAIAHPLDATGFVVAENAQLD
                     GFRACTFTSSKLAPRAPEGHALVRAFFRPSTEELALDDTAWTARAARALDRALAPTEA
                     PEHSWVARWPAALPVFDDEHRASVAALEASLSGSGILLAGAGFHGSGIDAALSSARRA
                     AEEHSV"
BASE COUNT          314 a          742 c          675 g          317 t
ORIGIN      
        1 ccggctcgag ctcgagcgcg cagagcgagt agctcaagcc gtgctcgcct ggatactcct
       61 ccgcgagcga gacgaagagt tgcgcgcctt cgttggcgtc ttgcgcgccg acgcgctgcc
      121 ccgactgctc ccattctaga atggccgtgc cgagcagcgt gcgcaggctc ggatcggctc
      181 cgccctccat cgttctcgct tcgcgaaacg cctgaacggc gcccatgaag tcgcgcgcgc
      241 tccgccggac ctcgccttcg tcctgccgaa gcgcgatgcg gcgctcgcga tcatcgacga
      301 gccgcagctc catctcgaag tacgggactg cctctcccca ctgctcggcc gccttcagca
      361 gctcgcgcac ggagtagatc gcgaactgat tgccgggatc gagctcgacc gcgcgtcggt
      421 aattttcgat ggccttgctc ggctggctca gcggctcggc ggaccagagc cgcccgagct
      481 cctcgtggag caacgcgagc tgcccgcgga cgttcggatc ctgctgcgcg agcggtgcga
      541 gcgccttggc acgccgctcg agcaaggcga cgagcgcctt cgtatcgccc ttttcgcgat
      601 acagatcggc gaggcgatcg gcgggagtct gctgcgtcgg atcgcgatca atcgcgatca
      661 tcagcgcccg cgcggcccgg tgcgcgtccg ccagcgtgac ggaccacacg tttgcggcct
      721 ccgtcagcca gtggcaggca aaagcaggat cggccgttgc agtgccgacc ttctcgagca
      781 acatcgcgta agatttcggg tctctttgac ccgcggagtg cgcttgccgg atcgcgtcct
      841 gatcgtgcgg gttctgcacg aggcgctgaa ccagcgtctc catttccctg gagtccatcg
      901 tagctggacg ctatcacgcg gactttatca cccgcaacgc gtgactcgtg cgctgtcgcg
      961 cgcaatttac gccgctagcg cagcgcgtcg actccacgcc cacgggccga caggtgcgag
     1021 gtgtcacaca ctgtgttctt ccgctgctcg ccgcgcggag ctgagcgccg cgtcgatgcc
     1081 cgagccgtga aacccagcgc ccgcgaggag gataccgctg ccgctcaacg acgcttctag
     1141 cgcggcgacg ctcgcgcggt gttcgtcgtc gaacacgggc agcgcagcgg gccaacgcgc
     1201 aacccacgag tgttcgggcg cttcggtcgg cgcgagcgcg cggtcgagcg cacgcgccgc
     1261 gcgcgccgtc cacgccgtgt cgtcgagcgc gagctcttcc gtactcgggc ggaagaacgc
     1321 gcgcacgagc gcgtgtccct ccggcgcgcg cggagcgagt ttggaagacg tgaacgtgca
     1381 agcgcgaaag ccgtcgagct gcgcgttttc ggcgacgacg aagcccgtcg catccagcgg
     1441 gtgcgcgatg gcggcgcgac gatacgcgag tgacaccgtg acgctcgaga gcgtcgccga
     1501 gcgctcgagc gccgccgcca cggcgccgaa aaccggcgcg agcaggcggc cagcggcgtg
     1561 cgcgcccgtc gcgacgaaca cgcgctcgaa ctcctgcttc ccttcgcccg ccgcgagctc
     1621 gagccgtgac ccgcgcggcg tgagcccttt taccggcgag cgcacacgga gatcgacggt
     1681 gggcccgagc acgcgcgcaa gggctgagac tacttccccc atgccgtcgc ggaacgcccg
     1741 aatgccctgc ccgagctcgc gccgcggcac ctggaagccg agaaattgcg cggcctcgcc
     1801 gcgcgcgagc tcgtgcaggc cctgcccgtc gaacgcgtac gacttgtggg tgagctggcc
     1861 cacgaggctc gtcgcgatcc cgagctcctc cgccagcctg gcgacggctt cgctgccggc
     1921 gacgaaaccc tccgcgcctt gttcgacgac gaacccggcg tccctgatcg tgcaaagctg
     1981 cccaccgagc tccggcttcg cctcgaacag cgtgacgtcg tccccgacct gcgcacgcca
     2041 aaaagcta
//
LOCUS       DATIML010000260         4510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1207065, whole genome shotgun sequence.
ACCESSION   DATIML010000260 DATIML010000000
VERSION     DATIML010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4510
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1207065"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..952)
                     /locus_tag="VLJ38_04520"
     CDS             complement(140..952)
                     /locus_tag="VLJ38_04520"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSU38804.1"
                     /translation="MTTSADFSERRARPGSEPWSAPGTGQRARTGILLVHGFTGSPVS
                     LRPLAELLAARGFAVDLPRLPGHGTSWRDMLPTRYDDWRGYVEARARALAERTDRVFL
                     VGLSMGGTLSLDVASGTPAKIAGVVTINAQILDRTGIVVKLGPFLEKILPVVPASVAG
                     LTANDIAKPDVGEQAYGWVPSAAGNSLLRALPRIREQLARMPCPVLVMYSRNDHSVPP
                     ANSKALLELIRGPELSELVLERSYHVATLDYDQPLIEERVTAFADRLSTAPS"
     gene            complement(969..2045)
                     /gene="ruvB"
                     /locus_tag="VLJ38_04525"
     CDS             complement(969..2045)
                     /gene="ruvB"
                     /locus_tag="VLJ38_04525"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HSU38805.1"
                     /translation="MAKRKVAALGAIPEAGASRGDELLAAGPRNEDERFDRVFRPESL
                     EEFVGQEQHKQNLRVFVEAARRRGEPLDHVLLCGPPGLGKTTLAHILAKEMGTHLSIT
                     SGPAVEHKGVLTGMLTRLERGDVLFIDEIHRLSAPVEEALYPAVEDFRIDVMMGEGAY
                     AESLTLDVKPFTLVGATTRTGLLTKPLQERFGVTLRLDFYPPADLERIILRSAKLLGV
                     PCDVDGARTLAARSRGTPRVANRLLRRTRDFAEVEGEGRVTRAIVELCCERVGVDHAG
                     LDEMDRRLLGVLIDHYDGGPVGVETLAAALAEPRDTVEDVYEPYLLQQGFLGRTPRGR
                     IATKKAFEHLGKEVRMRAEQGKLF"
     gene            complement(2083..3927)
                     /locus_tag="VLJ38_04530"
     CDS             complement(2083..3927)
                     /locus_tag="VLJ38_04530"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU38806.1"
                     /translation="MNPAASHLIRRVLGWSATFTLLGAALVALLAPRLLLLTGRVAIE
                     GATALGSGMLAGGIVGAVVRGVRLFRYRFLLRALAVGSRAVEAHELYELGHEPRRAIV
                     GWLVPSCVGAAVATIPFAPRTLDPNTSVTLCLLGLTIATAASLPLFVVLRTTFARALM
                     LAPVEVMREVEEDAERLGHIKGRVTRRMVLAVTLPVLCLAVGASLVVVGHLRRADERS
                     REESARMLARSVLEPGPGAELWGGMADAVLQARALGFYAYSQPESEEYRVTRGRAGRI
                     TLTMPLDHGSASVEFASSTASVVSPLGLLVALIAVAVAALLGVVIGRALSEDLTNATR
                     DVRELGTEAVMEGGRRVVSSARFHVVAQLGSAIARLAGRFRVFAHAQERSIEARNAAT
                     RARGLFFASVSHDLKSPLNAILGFTELVRRAQFITLGQAESLAVIERRGRELLALIET
                     ILDAARVEAGQLTLVLDAIEARAVIEQAVAKGRDLMDGREVQVVVEIAPGLPLIRVDR
                     VRLSRAIATFVAYAMREATTPSLRIAAGLETPAQVRIEIEVPSERFRESDLSGLLKPP
                     DAPGAAEHRGLALALRLGRSIVELHGGTVTPARRAGVGVFSLLLPAGT"
     gene            complement(3924..>4510)
                     /locus_tag="VLJ38_04535"
     CDS             complement(3924..>4510)
                     /locus_tag="VLJ38_04535"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU38807.1"
                     /translation="RALIDDVLDLSALESGELRLDVSYVDVFAVVQDIVRELSVTAEA
                     KGLTLALGGSQAHAFADEHRLRQIVGNVVGNAVKYTESGRVEVQVDALPDEVRVRVTD
                     TGPGIAPSDHEAIFEEYWQSSEARTRRAGTGLGLAITRRLVQMHGGRVELESELGRGS
                     TFRIMLPIERAADSRRDRSRPRASRPPPPLERAP"
BASE COUNT          729 a         1514 c         1625 g          642 t
ORIGIN      
        1 tatgagagtt gaaccgccaa ggcgcagagg aattgaaccg ccaagacgcc aagaggtttt
       61 tgatcggaac ggagctggag cagggtcaac aaacgcctgc tcaatcatta aaaactctcg
      121 gcgtcttggc ggttcaaact caggacggag ccgtgctcag ccgatcggcg aaagccgtca
      181 cgcgctcctc gatgagcggc tggtcgtagt cgagcgtcgc gacgtgatac gagcgctcga
      241 gcacgagctc gctgagctcg gggccgcgaa tcagctcgag cagcgccttg gagttcgcgg
      301 gcggcacgct gtgatcgttg cgcgagtaca tgacgagcac ggggcacggc atgcgcgcga
      361 gctgttcgcg aatgcgcggg agtgcgcgca agagcgaatt gccggcggcc gagggcaccc
      421 agccgtacgc ttgttccccg acgtcgggct tggcgatgtc gttggcggtg aggccggcga
      481 cggacgccgg caccacgggc aggatctttt cgagaaacgg gccgagcttc acgacgatgc
      541 cggtgcggtc gaggatttgc gcgttgatcg tgacgacgcc cgcgatcttt gcgggcgtgc
      601 cgctcgcgac gtcgagcgag agcgtgccgc ccatggagag gccgacgagg aacacgcggt
      661 cggtgcgctc ggcgagcgcg cgggctcgag cttcgacgta gccgcgccag tcgtcgtagc
      721 gggtcggcag catgtcgcgc cagctcgtgc cgtggccggg cagccgcggc agatcgacgg
      781 cgaacccgcg cgccgcgagc aattccgcca gcggtcgcag cgaaacgggg ctgcccgtga
      841 agccgtgcac gagcaaaatg cccgtgcgcg cgcgctgtcc cgttcccggc gccgaccacg
      901 gctcactgcc tggtcgcgcc cgtcgctcgc tgaaatcggc ggatgtcgtc atcgcgtcga
      961 aatagaggtc agaagagctt accttgctcc gcgcgcattc gcacctcttt gccgaggtgc
     1021 tcgaacgcct tcttggttgc gatgcggccg cggggcgtac ggcccagaaa tccctgctgc
     1081 aaaaggtacg gctcgtaaac gtcctcgacc gtgtcgcgtg gttccgcgag ggcggcggcg
     1141 agcgtctcga cgccgacggg accgccgtcg tagtggtcga tgagcacgcc gagcaggcgc
     1201 cggtccatct cgtcgaggcc ggcgtggtcc acgccgacgc gttcgcagca gagctcgacg
     1261 atggcgcggg tgacgcggcc ttccccttcc acctcggcga aatcacgggt gcggcgcagc
     1321 aggcgattgg cgacgcgcgg cgtgccacgc gagcgtgcgg cgagcgtgcg cgcaccgtcg
     1381 acgtcacaag gaacgccgag gagcttggcg ctccgtaaaa tgatgcgctc gagatcggcg
     1441 ggggggtaaa aatcgagccg taaggtgacg ccgaagcgct cctgcagggg tttcgtgagc
     1501 aggcccgtgc gcgtggtcgc gccgacgagc gtgaacggct tcacgtcgag cgtgaggctc
     1561 tcggcgtagg cgccctcacc catcatcacg tcgatgcgaa agtcttcgac ggcggggtag
     1621 agcgcctcct cgaccggcgc tgaaaggcgg tggatttcgt cgatgaagag cacgtcgccg
     1681 cgctcgaggc gcgtcagcat gcccgtgagc acgcccttgt gctcgacggc ggggccgctc
     1741 gtgatgctga ggtgcgtgcc catttccttg gcgaggatgt gggcgagcgt cgttttgccg
     1801 agaccggggg gaccgcacaa gagcacgtgg tcgagtggtt cgccgcggcg gcgggccgct
     1861 tccacgaaca cgcgcaggtt ttgcttgtgc tgctcctgcc ccacgaactc ctcgagcgat
     1921 tcaggacgaa agacgcgatc gaagcgctcg tcttcgttgc gcgggcccgc ggcgaggagc
     1981 tcgtcgccac gcgacgcccc ggcttcgggg atcgcgccca gcgcggcgac cttgcgctta
     2041 gccatgctcg gcctcgggtg tcacgtcacg ttccctatca cgtcaggttc ccgccggcag
     2101 cagcagcgag aacacaccga cgccggcccg gcgcgcgggc gtgacggtgc cgccgtgaag
     2161 ctcgacgatc gagcggccga gccgcagcgc gagcgcgagg ccgcgatgct cggcagcgcc
     2221 cggagcgtcg ggcggcttga gcagccccga gaggtcgctt tcgcgaaagc gctcgctcgg
     2281 gacctcgatc tcgatgcgga cttgcgcggg cgtttcgaga ccggcggcga tgcgcaagga
     2341 cggcgtcgtc gcctcgcgca tggcgtaggc gacgaaggtt gcgatcgcgc gcgacagccg
     2401 cacgcgatcg acgcgaatca gcggcagacc cggcgcgatt tcgacgacga cctgcacctc
     2461 gcggccgtcc atcaagtcgc gccccttcgc tacggcctgc tcgatcacgg cgcgcgcctc
     2521 gatcgcgtcg agcacgagcg tgagctgccc ggcctcgacg cgcgccgcgt cgaggatggt
     2581 ctcgatcagc gcgagcagct ctcgtccgcg gcgctcgatc acggccagac tctcggcctg
     2641 gccgagcgtg atgaattgcg cgcgccgcac gagctcggtg aagcccaaaa tcgcgttgag
     2701 cgggctcttc aagtcgtggc tcacgctcgc gaagaagagg ccgcgcgcgc gcgtggcggc
     2761 gttgcgcgcc tcgatgctgc gctcctgggc gtgcgcgaac acgcgaaagc ggccggccag
     2821 gcgcgcgatg gcggatccaa gctgcgccac gacgtgaaaa cgcgccgaac tcacgacgcg
     2881 ccgtccgcct tccatcacgg cctcggtgcc gagctcgcgc acgtcgcgcg tggcgttcgt
     2941 caagtcttca ctcaaggcgc ggccgatgac gaccccgagc agcgccgcga cggcgaccgc
     3001 aatcagcgcg acgagtaagc cgagcgggct caccaccgag gccgtcgagc tcgcgaactc
     3061 gacgctcgcg ctgccgtggt cgagcggcat cgtcagcgtg atgcgaccgg cgcggccacg
     3121 cgtcacccgg tactcttcgc tctcgggctg tgaataagcg taaaagccga gggcacgcgc
     3181 ttgcagcacg gcgtcggcca tgccgcccca gagctcggcg cccggcccgg gctcgagcac
     3241 ggagcgggcg agcatgcgcg cggattcttc gcggctgcgt tcgtcggccc ggcgcaggtg
     3301 gccgacgacg acgagcgacg cgccgacggc gagacacaag accggcagcg tgacggcgag
     3361 caccatgcgc cgcgtcacac gacccttgat gtgaccgagc cgttcggcgt cttcctcgac
     3421 ttcgcgcatg acctcgaccg gggcgagcat cagggcgcgc gcgaacgtcg tgcgcaacac
     3481 gacgaacaga ggcagcgacg ccgccgtcgc gatcgtgagc ccgagcaagc agagcgtcac
     3541 ggacgtgttc gggtcgagcg tacggggcgc gaacgggatc gtggcgacgg cggcgccgac
     3601 acaggagggc acgagccagc cgacgatcgc tcgcctcggt tcgtgaccga gctcgtagag
     3661 ctcgtgggct tcgacggcgc gcgacccgac ggcaagggcg cgcagcagaa accgataacg
     3721 gaaaagccgc acgccgcgca cgaccgcacc cacgatgcct cccgcgagca tgccggagcc
     3781 gagcgccgtc gcgccttcga tcgcgacgcg gcccgtgagc aggagcagcc gcggcgcgag
     3841 cagcgcgacg agcgccgcgc cgagcagcgt gaacgtcgcg ctccatccga gcacgcggcg
     3901 gatcaggtgg gatgccgcgg gattcatggc gcacgctcga ggggcggcgg cggtcgtgag
     3961 gcgcggggac gcgaacgatc ccgccgagag tccgccgccc tttcgatggg cagcatgatg
     4021 cggaaggtcg agccgcggcc gagctcgctc tcgagctcga cgcgcccgcc gtgcatctgc
     4081 acgaggcggc gcgtgatggc gagcccgagc cccgtgcccg cgcggcgagt gcgcgcttcg
     4141 ctcgactgcc aatactcctc gaagatggcc tcgtggtccg acggggcgat gccgggcccc
     4201 gtgtccgtca cgcgcacgcg tacttcgtcg ggcagcgcgt cgacctggac ctcgacgcgc
     4261 ccgctctcgg tgtacttgac ggcgttgccg acgacgttgc cgacgatctg gcgcagccgg
     4321 tgctcgtcgg cgaaggcgtg ggcttgcgag ccgccgagcg cgagcgtgag acccttcgct
     4381 tcggccgtga cgctgagctc gcgcacgatg tcctgcacga ccgcgaagac atcgacgtag
     4441 ctcacgtcga gacggagctc gcccgactcg agcgcggaca aatcgagcac gtcgtcgatg
     4501 agcgcgcgca
//
LOCUS       DATIML010000261         1856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1784152, whole genome shotgun sequence.
ACCESSION   DATIML010000261 DATIML010000000
VERSION     DATIML010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1784152"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..602
                     /locus_tag="VLJ38_04540"
     CDS             <1..602
                     /locus_tag="VLJ38_04540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38808.1"
                     /translation="VIAPLSREPTSKGVTLDSAQLSLALLSLQACAADTATLNVRNFP
                     IELFDPRGYQAIFESAVTDFCSVGLDLAPAPGSAALPDLRGYTALLRGTRADGAAFEL
                     TSTLSTSFAFVSSSVLAADKLVLGVDLEQWLAGVDLDAATATDDLVLVNADANPEKLA
                     AFDAAAGSALALYEDANGDGALSDSELTPVATAAAATTE"
     gene            complement(547..1365)
                     /locus_tag="VLJ38_04545"
     CDS             complement(547..1365)
                     /locus_tag="VLJ38_04545"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HSU38809.1"
                     /translation="MHPLLFEISLGSWGILEVPAFGALLALAFGVGLLLTVRAAARAG
                     VDRELALGAGLVALFAGVLGARAGFVILHARELASFSEALSLRNGGLSGSTGLLAGAV
                     ALAFEARRRRVSWRLLFDCAAPALGIGVVLTRLGCWLEGCDFGRRLPRAAPSWLTGLG
                     TFPRGSPAFVEQVVANGLDPGASRALPVHPSELYECVAVLGVVAAALLFRRRARSAGV
                     TALAILSLYAALRVAVDFTRVASADVWCARAVFALALIPWWLRLPSRPASAPNR"
     gene            1393..>1856
                     /locus_tag="VLJ38_04550"
     CDS             1393..>1856
                     /locus_tag="VLJ38_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38810.1"
                     /translation="MGPVLRKLVCVGVACVACLPADPPGFHRDAGRVLGHSASTKSKS
                     NVKHGDATAVRTQSAPVAADAAAHVLDEALNEDFNRPALGPDWNPTSNAWHLEDGRLC
                     VKGAKNHPAWLNRRLPKNAHIEFDATPGSPEGDIKAEVWGDGHSVPAGATYD"
BASE COUNT          354 a          656 c          621 g          225 t
ORIGIN      
        1 tcgtgatcgc gccgctctcc cgcgagccga ccagcaaggg cgtgacgctc gactcggcgc
       61 agctgtcgct cgcgctcctg tcgctccagg cctgtgctgc agataccgcg acgctcaacg
      121 tgcggaactt tccgatcgag cttttcgacc cgcgcgggta tcaggcgatt ttcgagagcg
      181 ccgtcaccga tttttgcagc gtcgggctcg acctcgcgcc tgcgcctggg agcgccgccc
      241 tgccggattt gcgagggtac acggcgcttt tgcgcggcac gcgtgccgac ggcgctgcgt
      301 tcgagctcac gagcacgctc agcacgagct tcgcgttcgt gagcagctcg gtgcttgcgg
      361 ccgacaagct ggtcctcggc gtcgatctcg agcagtggct cgcgggcgtt gacctcgacg
      421 ccgcaacggc gacggacgac ctggtgctcg tcaacgcgga cgctaacccc gaaaagctcg
      481 ctgcattcga cgccgccgcg ggcagcgcgc tggcgctcta cgaagatgca aacggggacg
      541 gtgcgctcag cgattcggag ctgacgccgg tcgcgacggc agccgcagcc accacggaat
      601 gagcgccagc gcgaacaccg cgcgcgcaca ccaaacgtcc gccgaggcga cgcgcgtgaa
      661 atcgaccgcg acgcgcagag cggcatagag cgagaggatc gccagcgccg tcacgcccgc
      721 gctccgcgcc cgtcgccgga aaaggagcgc cgcggcgacc acgccgagca ccgccacgca
      781 ctcgtaaagc tcgctcggat gcacggggag cgctcttgaa gcccccggat cgagcccgtt
      841 cgccacgact tgctcgacga aagcggggga gccgcgcggg aacgtaccga gccccgtaag
      901 ccaggaaggt gcggctctgg gcaagcgccg gccgaaatcg caaccctcga gccaacaacc
      961 gagacgcgtg aggacgaccc cgatacctaa cgcgggagct gcgcaatcga acaagaggcg
     1021 ccacgacaca cgccggcgac gcgcctcgaa cgcgagcgca accgcgcccg cgaggagacc
     1081 ggtgctgccc gaaagcccgc cgttcctcag cgacagcgct tcactgaacg acgcgagttc
     1141 gcgcgcatgc aagatgacga agcccgcgcg cgcaccgagc acgcccgcga aaagagcgac
     1201 gagacctgcg ccgagcgcga gctcacggtc gacgcccgcg cgcgcggctg cgcgcacggt
     1261 gagcaggaga ccgacaccga aggcgagcgc gagcaacgct ccgaaggcgg ggacctccaa
     1321 aatcccccag gagccgagcg agatctcgaa caataacgga tgcatcgggc gccgcgcgcc
     1381 aaatcgcgta gcatggggcc cgtgctgcga aagctcgtct gcgtgggggt cgcctgcgtc
     1441 gcgtgcttgc ccgccgatcc acccgggttt catcgtgacg ccgggcgagt gctcgggcat
     1501 tccgcgagca cgaagtcgaa gtcgaacgta aagcacggcg acgcgacggc cgtacggacg
     1561 cagtcggcgc ccgtcgccgc ggacgccgct gctcacgtgc tcgacgaagc cctcaacgaa
     1621 gacttcaatc gaccggcgct cggtcccgac tggaatccga cgtcgaacgc gtggcatctc
     1681 gaggacggcc ggctgtgcgt gaagggcgca aagaaccacc ccgcgtggct gaaccgccgc
     1741 ctgcccaaaa atgcacacat cgagttcgac gcgacgcccg gctcacccga gggcgacatc
     1801 aaggccgaag tctggggaga cggccatagc gtccccgcgg gagcaacgta cgacga
//
LOCUS       DATIML010000262         2785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_52769, whole genome shotgun sequence.
ACCESSION   DATIML010000262 DATIML010000000
VERSION     DATIML010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52769"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..598)
                     /locus_tag="VLJ38_04555"
     CDS             complement(95..598)
                     /locus_tag="VLJ38_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38811.1"
                     /translation="MLERFGVWGDACCHPRDSHVSRCRLERDWYEDCIVRGMSVMPTR
                     PVATHEAISASLRVVESAIALARAETKLALVRGRELATHAIALLLGGLVAMTFLALTL
                     VIVSLSPVSAAPSAALRVAWLPLPWPFLLSLSASVAITVAGTWVAIAAFRRLKSVSAG
                     DEPGERT"
     gene            676..1020
                     /locus_tag="VLJ38_04560"
     CDS             676..1020
                     /locus_tag="VLJ38_04560"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HSU38812.1"
                     /translation="MQTLRNLIFSVGAAIAGTKIVRAVTDLEFDDVLAPIGLSRRRSH
                     VVTDIALLGAGMVLGGAAALIFAPMSGRETRQRLASKADELGDAAAQKLRDIRDEVRP
                     RLGNSHMSESNA"
     gene            1464..1856
                     /locus_tag="VLJ38_04565"
     CDS             1464..1856
                     /locus_tag="VLJ38_04565"
                     /inference="COORDINATES: protein motif:HMM:NF025704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4398 domain-containing protein"
                     /protein_id="HSU38813.1"
                     /translation="MTFLQDDRAVLAPLRALGFAALLVACSSTRPLPPNYAPTRAAIS
                     AADAVGADEQPRAALHLKLARDQLVEAQALAQRGKSEEASLALDCARTDAELALMVAR
                     EAQARADAARAKEDVQRLGNADSARSAE"
     gene            1883..2764
                     /locus_tag="VLJ38_04570"
     CDS             1883..2764
                     /locus_tag="VLJ38_04570"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU38814.1"
                     /translation="MRTSLFTLSLVSLTALACASTAPSPELLDARRAYESARVAPEAR
                     YTPDRVLEAKQALDRAEYAHEKEPGSYEEKSLAYIAERRAELAIVYGQYDADRRMRHT
                     ADAQYKAREDVLRREAEANAAETRRVLEGTRATLGTVQGNPADGQQARQRADSGNAAA
                     LSSLNQIARVEDDARGTVITLDGSLLFAANKSELLPSARQKLDDVAKALKDGAENITV
                     LGHADSQGMKAEANPRLSQERADAVRAYLVERGVAPDRMKAVGAGATEPVSSKATPAG
                     RADGGRIEIVVEKRRAP"
BASE COUNT          503 a          915 c          962 g          405 t
ORIGIN      
        1 tccgcgagtc gctgcgaaag cgcgtgttct gctcggctta cgtcccgctt ggcggcctgc
       61 agctcgttcc aggcacctgt gccagcgtgc cggttcatgt gcgttctccc ggttcgtctc
      121 cggctgacac ggatttcaag cgccgaaaag cggcgatcgc gacccacgtc ccggccacgg
      181 tgatcgcgac cgaagcgctc aagctgagta gaaagggcca cggcagcggc agccaagcga
      241 cgcgcagggc ggcgctcggc gcggcggaca ccggcgacaa cgaaacgatg acgagcgtca
      301 aggcgaggaa cgtcatcgct acgagaccgc ccagcaagag cgcgatcgcg tgcgtcgcca
      361 gttcacgccc ccgcacgagc gcgagcttcg tctcggcgcg tgcgagcgca atagcgcttt
      421 ccacgacgcg cagcgacgcc gaaatggctt cgtgcgtcgc gacaggtcgt gtcggcatca
      481 cggacatgcc gcgcacgatg cagtcttcgt accaatcgcg ctcgaggcgg cagcgggaaa
      541 cgtgactgtc acgcgggtga caacatgcat caccccagac gccaaaccgt tccagcacgc
      601 ctctacgctg gacttccctc atggtccgcg ccttgcagga cagacgccga accctcaaca
      661 caccgaggtg caatcatgca gacccttcgt aatctgattt tttctgtggg tgcggccatc
      721 gccggcacca agatcgttcg cgccgtcacc gacctagagt tcgacgatgt gctcgccccg
      781 atcggccttt cgcgccgtcg ctcgcacgtt gtgaccgaca tcgcgttgct cggcgccggc
      841 atggtgctgg gcggtgcagc cgccctcatt ttcgccccga tgagcgggcg tgagacgcgc
      901 cagcgccttg ccagcaaagc cgacgagctc ggtgacgcgg cggcgcagaa gctccgcgac
      961 atccgcgacg aagtgcggcc gcggctcggc aacagccaca tgtccgaatc gaatgcgtaa
     1021 attcgggaac ggccggaacg tgggggcatt ttgcgtcgcg ttccggccgt caccatcggg
     1081 ggaagctggt tcatcttgga gcagcttgtg agctgggacc gggaagttgg gaggacggag
     1141 gagggcaggg gcggaacgga ggagggcagg ggcggacaga gcatgctgca gcgcatgcgc
     1201 gaaagcggcg gtgaggcgtc ggaggacgcg cgggactcgg agcagtcgcg ctcgcggcgg
     1261 tcggaaagct cgagtacggg tcgagctcga gtacggcgcc tgtcgagtac ggcgcctgtg
     1321 atgcgctgct cgagggttgc gtgacgctgc gcaggcgtcg tgcgtcaaag acgtcctcgg
     1381 cgtggcagct cgtcacgttg agctagcgtg ccggtccacg tggatgagcg aaggttggcc
     1441 cgacgcttgc tccactgcgg gacgtgacct tcctgcaaga cgaccgcgcc gtgctggctc
     1501 cgctgcgagc gctgggattc gctgccctcc tcgttgcgtg cagctcgacc cggccgctgc
     1561 ctccgaacta tgcgcccact cgagcggcta tcagcgctgc cgacgcagtc ggtgcggacg
     1621 agcagccgcg cgcggcgcta cacctcaagc tggcgcgcga tcagctcgtc gaagcgcagg
     1681 cgctcgcgca gcgcggtaag tcggaggaag cttcgcttgc gctcgattgc gcgcgcaccg
     1741 acgccgagct cgcgctgatg gtggcgcgtg aagcgcaggc acgcgccgac gccgctcgcg
     1801 ccaaagaaga cgttcagcgg ctggggaacg ccgacagcgc tcggagcgcc gagtgatccc
     1861 ggagccgtcg cggagatttg ccatgagaac ttcattgttc acgctttcat tggtctcgct
     1921 cacggcgctt gcgtgtgcga gcactgcacc gagccccgag ctgctcgacg cgcgccgcgc
     1981 ctacgaatcg gcgcgcgtcg cgccggaggc gcgctacacg cccgaccgcg tgctcgaggc
     2041 gaagcaagcg ctcgatcgcg ccgaatacgc ccacgaaaag gagccgggct cgtacgagga
     2101 gaagagcctc gcctacattg ccgagcggcg cgccgagctc gctatcgttt acggacagta
     2161 cgatgccgac cgccgcatgc ggcacacggc cgacgcgcaa tacaaggcgc gcgaggacgt
     2221 gctgcgccgc gaagcagagg cgaacgccgc cgaaacacgc cgcgtgctcg agggcacgcg
     2281 cgcgacgctc ggtacggtgc aaggcaatcc tgccgatgga cagcaggcac gacaacgagc
     2341 cgacagcgga aacgccgcgg ccctgtcgag tctgaatcaa atcgctcgtg tcgaagacga
     2401 cgcgcgcggc accgtcatca cgctcgacgg ctcgctgctg ttcgccgcga acaaatcgga
     2461 gctcttgccg agcgcccgcc agaagctcga tgacgtagcc aaggcgctga aggacggcgc
     2521 agaaaacatc acggtgctcg gacacgccga ctcacaaggt atgaaggcag aggcgaatcc
     2581 gcgcctgtcg caggagcgag cggacgcggt gcgggcgtac ctggtcgagc gcggcgtcgc
     2641 gcccgatcgc atgaaggccg tcggcgcagg cgcgaccgag ccggtcagct cgaaagccac
     2701 gcctgcaggt cgcgcggacg gcgggcgcat cgagatcgtg gtcgagaaaa ggcgggcccc
     2761 atgaccgcgc tcgctgaaag cgatc
//
LOCUS       DATIML010000263         1597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1785370, whole genome shotgun sequence.
ACCESSION   DATIML010000263 DATIML010000000
VERSION     DATIML010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1785370"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..824)
                     /locus_tag="VLJ38_04575"
     CDS             complement(<1..824)
                     /locus_tag="VLJ38_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HSU38815.1"
                     /translation="MTEIYGNTAGLAPSALRALERIYRRRVPLDRITTPELVRSLTDA
                     SRETGRQVGALVHRSGNIDSVVVGHATGLMLPDIGRLRAAEGRFRALRLVHTHLYNEP
                     LTQDDLVDLTRLRLDLVAAVLLDREGEPVRFTYAYNVPAAEGRERPYEIVGPVPHGQP
                     QPDFGALIGSLEAEFARQFKNRTRKAKDGLAILVHVGEKQRSGALATAKSRLDELAAL
                     AETAGVAVADRVIQLRDRLDPNYLLGAGKLEQVVMRAIELDVETLIFDCNLSPAQA"
     gene            1026..>1597
                     /locus_tag="VLJ38_04580"
     CDS             1026..>1597
                     /locus_tag="VLJ38_04580"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38816.1"
                     /translation="MSSSSEPISQEQPKTSSVSPGEVIGERYRVEGPIGEGGMGIVCR
                     ATHVALETPVAIKLIRPDFKDDVEFVRRFLNEARRAAALKSDRIARVHDVGQLDSGEP
                     YLVMELLEGIELERYLLQHGPLAPIDAVNVALQLCEGLAEAHAAGIVHRDIKPSNAFL
                     VRRADGRFAVKILDFGISKQLVDGRTSITN"
BASE COUNT          268 a          520 c          562 g          247 t
ORIGIN      
        1 tgcgcctgcg cggggctcag gttgcagtcg aagatgagtg tttcgacatc gagctcgatc
       61 gcgcgcatca cgacctgctc gagcttgccc gcgccgagca ggtaattggg gtcgaggcgg
      121 tcgcgcagct ggatcacgcg atcggcgacg gcaacccccg cggtctcggc gagcgcggcg
      181 agctcgtcca ggcgcgactt ggccgtcgcg agcgcgcccg agcgctgctt ttccccgacg
      241 tggacgagga tggcgagtcc gtctttggcc ttgcgcgtgc ggtttttgaa ttgacgcgcg
      301 aactcggctt cgagcgagcc gatgagcgcg ccgaaatcgg gctgcggctg tccgtgcggg
      361 accgggccca cgatttcgta gggccgctcg cggccttctg ctgccggcac gttgtacgcg
      421 tacgtaaaac gcacgggctc gccctcgcga tcgagcagca ccgccgcgac taggtcgagc
      481 cgcaaccgcg tgagatcgac gaggtcgtct tgagtgagcg gctcgttata aaggtgcgtg
      541 tgcacgagcc ggagcgcgcg gaagcgtccc tcggcagcgc gcagacgacc gatgtccggc
      601 agcatgagcc ccgtcgcgtg cccgacgacg acggagtcga tgttaccgga gcggtgcacg
      661 agcgcaccca cctgccgccc cgtttcgcgc gaggcgtccg tcagggaacg gacgagctcg
      721 ggcgtggtga tgcggtcgag cggcacgcgg cggcggtaga tgcgctccag cgcgcggagg
      781 gcgctcgggg cgagaccggc ggtgttgccg tagatttcag tcattcacgc tagaaagctg
      841 caatcgatct agcacgactt cggcggcgag gccgcccggg ggggcacagc gagagcccgt
      901 gtccgcgtga ggcactctgc cgcggcgtgg cgaggctcgc tagtcagcgc gcacggcgag
      961 gccgaaagcg gccgcgacac gtctcggagc tggcacgcgc ggtgcttcag gtgaaccaag
     1021 gcaccatgtc gtcgtcgtcc gagcccatct cgcaagaaca gccgaagacc tcgagcgtga
     1081 gccccggaga agtcatcggg gagcgctatc gggtcgaagg gccgattggt gagggcggga
     1141 tgggcatcgt gtgtcgggcg acgcacgtcg cgctcgagac gcccgtcgcc atcaagctca
     1201 tccgtcctga cttcaaggac gacgtcgagt tcgtgcggcg cttcctgaac gaagcgcgcc
     1261 gcgcggcagc gctcaaaagc gaccgcatcg ctcgcgtgca cgacgtgggg cagctcgact
     1321 ccggggagcc ctacctcgtc atggagctgc tcgaaggcat cgagctcgaa cgttacctgc
     1381 tgcagcacgg tccactcgcg ccgatcgacg ccgtgaacgt cgcgctccag ctctgcgagg
     1441 gcctcgccga agcgcacgcc gcgggcatcg tccaccgcga catcaaaccg agcaacgcgt
     1501 tcctcgtgcg ccgtgccgac ggcagatttg ccgtcaaaat cctcgatttc ggcatctcga
     1561 agcagctcgt cgacggcagg accagcatca cgaacaa
//
LOCUS       DATIML010000264         3687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4674670, whole genome shotgun sequence.
ACCESSION   DATIML010000264 DATIML010000000
VERSION     DATIML010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3687
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4674670"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..979)
                     /locus_tag="VLJ38_04585"
     CDS             complement(<1..979)
                     /locus_tag="VLJ38_04585"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSU38817.1"
                     /translation="MALGRDAARGALLSISSGMGARAIGLVSTLLLARFLSPGEYGEV
                     TVAAVLVMTATQLSTLGLGQFLIAEPSADRSVAFHVTAYHLLSGVLALGAVLVGGRLL
                     GATLDAPHLARFLPGLAAAALCDRIAYVPERLLVRDLRFGVLSGARTGAELAYSVSTV
                     LFAALGWGAAAVVAGNVARSLLRSTVFIAAVSRRDWFEPTRLSAEQTRKLFAFGVPMA
                     LGASCSFAARRWDNLLVSHFFGPGPTGAYNLAYNLADVPAIQVGEQIGDVLLPSFARL
                     EPQRRAAALVRSMALLGLVVFPLAVGLGAVAPTLVAVLFDQRWRSIGPML"
     gene            complement(980..1588)
                     /locus_tag="VLJ38_04590"
     CDS             complement(980..1588)
                     /locus_tag="VLJ38_04590"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HSU38818.1"
                     /translation="MRTSSGHRHRTLLLGVTLALLVGCASNRGQLVSPNPNDDPRRQP
                     YVVGPSDVVTVTVWKDPALSTEAVVRPDGTITIPVAGELKAAGRTIADLQNEAQQRIA
                     TLVKDAVVTVSVSEVNSYRFTVAGNVEHPGLFTSRYYLTVSEAIALAGGPNRYASTHD
                     IVVVRPTQSGPQRIAIDYDRILSGKSPEQDIVLRAGDAVRVP"
     gene            1615..3012
                     /locus_tag="VLJ38_04595"
     CDS             1615..3012
                     /locus_tag="VLJ38_04595"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HSU38819.1"
                     /translation="MFAIPGIIGLVFLIYVRPQEYFGPLRAVPFLYLCFGLWLLGMVI
                     DLRIGNVRWRKTPQLWLVLVFFVYAAITALVHGPAEAAKPLTTLAVCVALYLGIGHAV
                     QSFRALEVVSGVVLAVVLFVCGVGAEQGFASRGCVVIDESTPSDTASGRYDGRPCETS
                     RTCYQGDAEPDAEYMCERIGLFGTTSIGQGRVRYRGTLQDPNELALAGGAGLPLAFAL
                     GRKRRSLTRGVLTVLTLALVGLCAVLTESRGGQLVFLAVLAVFFVKRFGYGGLAVGGV
                     LAIPLLLLGGRSGEEASSSTLERIDCWAEALSMWRSHPLTGVGLGHFTDYHYMTAHNS
                     YLLALAELGLPGMLLFTGILYLSAKIPVEVLRRFPRPRRGQPDDEAVVARRWAMTYLA
                     AFAGLGVGIFFLSFSYHYVLWIYLGLAGALYSAVRSHAPWFRVRLRALDGVALVLIDG
                     AIIALVYLYTHAAHA"
     gene            3224..3667
                     /locus_tag="VLJ38_04600"
     CDS             3224..3667
                     /locus_tag="VLJ38_04600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38820.1"
                     /translation="MFRLRTLALIGGLLIVVAACVRFGLKHVGSRERVVEATHTPITG
                     LGPATLAPVQPAGGARRILLDTAALARLRESARARTEPYRFVLARADEALAKPVESGY
                     QGFEWADAVADLALIWHATGDARYAEGALRYLNALLDDRLAVGDH"
BASE COUNT          578 a         1220 c         1277 g          612 t
ORIGIN      
        1 ccagcatggg gccgatcgag cgccagcgct ggtcgaagag cacggcgacg agcgtcggag
       61 cgactgcgcc gagcccgaca gccaggggga agacgacgag gccgagcagg gccatcgagc
      121 ggacgagcgc ggcggcgcga cgctgcggct cgagccgtgc gaacgagggc aagagcacgt
      181 cgccgatctg ctcgccgacc tgaatcgccg gcacgtcggc gaggttatac gcgagattgt
      241 acgcgccggt cgggcccggc ccgaagaagt gcgagacgag caggttgtcc cagcggcgcg
      301 ccgcgaagga acaggaggca ccgagcgcca tgggcacgcc gaaggcgaag agcttgcgcg
      361 tctgctcggc gctgaggcga gtcggttcga accagtcgcg gcggctgacc gcggcgatga
      421 acacggtgct ccgcaagagc gagcgggcga cgttaccggc gacgacggct gcagcgcccc
      481 aaccgagcgc ggcgaagagc acggtcgaca cgctgtaggc gagctcggcg cccgtgcgcg
      541 cgccgctcaa gacgccgaag cggagatcgc gcacgagcaa gcgctccggc acgtaagcga
      601 tgcgatcgca cagcgccgca gcggcgagcc ccgggagaaa tcgcgccagg tgcggagcgt
      661 cgagcgtggc gccgagcagc cgtccgccga cgagcacggc cccgagcgcg agcacgccgg
      721 agagcaggtg atacgccgtg acgtggaacg cgacgctgcg atcggccgaa ggctcggcga
      781 tcaggaactg accgagaccg agcgtcgaga gctgcgtggc cgtcatcacg agcacggccg
      841 cgacggtgac ctcgccgtac tcacccggcg aaaggaagcg tgcgagcaac agggtgctga
      901 cgagcccgat ggcgcgcgcg cccatgcccg aggagatcga caagagcgcg ccgcgagccg
      961 cgtcgcgacc gagcgccact tacggcaccc tcacggcgtc gcccgcgcgc agcacgatgt
     1021 cttgctcggg gctcttgccg gagaggatgc gatcgtagtc gatggcgatg cgctggggac
     1081 cgctctgggt cggccgaacc acgacgatgt cgtgggtcga ggcgtaacga ttggggcccc
     1141 cggcgagcgc gatcgcctcc gagacggtga ggtagtaacg cgaggtgaac aggccggggt
     1201 gctcgacgtt gccggccacc gtgaaacggt agctgttcac ttccgagacg gagacggtga
     1261 cgaccgcgtc tttgacgagc gtcgcgatgc gctgctgcgc ttcgttttgc aggtcggcga
     1321 tcgtgcgacc cgcggccttg agctcgccgg cgacggggat cgtgatcgtg ccgtcgggcc
     1381 gcacgacggc ctcggtcgag agcgccgggt ccttccacac cgtgacggtc acgacgtcgg
     1441 acgggccgac gacgtacggc tgccggcggg ggtcgtcgtt cggattcggc gagaccagct
     1501 gtccgcgatt gctcgcgcag ccgacgagca gcgcgagcgt cactccgagg aggagtgtcc
     1561 gatgtcgatg tccagatgag gtacgcatcg ctcaatatct aaacacgaaa taacatgttt
     1621 gccatacccg gaatcatcgg gctcgtattt ttaatttacg ttcgcccgca agagtacttt
     1681 ggcccgcttc gcgccgtgcc ttttctgtat ctgtgtttcg gactctggct attgggcatg
     1741 gtgatcgatt tgcgcatagg caacgtgcgc tggcgcaaaa ctccacagct ctggctcgtg
     1801 ctcgtctttt tcgtctacgc tgcgattacc gcgctcgtgc acggtccggc cgaagcggcg
     1861 aagccgctca cgacactcgc tgtttgcgtc gcgctctatc tcggtatcgg gcacgccgta
     1921 caatcctttc gcgcgctcga ggtcgtgtcg ggggtggtgc tcgccgtcgt cttgttcgtg
     1981 tgcggcgtcg gcgccgagca gggcttcgcg tcgcgcggct gcgtcgtgat cgacgaatcg
     2041 acgccctccg acaccgcgtc gggcaggtac gacggacgcc cctgcgaaac gtcgcgcacg
     2101 tgttaccagg gcgacgccga gcccgacgcc gaatacatgt gcgagcgaat cggcctgttc
     2161 ggcaccacct ccatcggcca aggtcgcgtg cgctaccgcg gtacgctgca ggatccgaac
     2221 gagctcgcgc tggctggcgg cgcgggcctg ccgctcgcgt tcgcgctcgg gcgcaagcgg
     2281 cgctcgctga cgcgcggcgt gctcacggtg ctcacgctgg cgctcgtggg gctctgcgcc
     2341 gtgctcacgg agtcccgcgg cggacagctc gtgttcctcg ccgtgctcgc cgtattcttc
     2401 gtcaagcgct tcggctacgg gggactcgcc gtcggcggcg tgctcgcgat accgctgctc
     2461 ttgctcggcg ggcgcagcgg cgaggaggcg tcgagctcga cgctcgaacg catcgactgc
     2521 tgggcggagg cgctgtcgat gtggcgctcg catccgctca cgggcgtagg cctcgggcac
     2581 ttcaccgact atcactacat gacggcgcac aattcctatc tgctcgcgct ggccgagctc
     2641 ggcctgcccg gcatgctgct atttaccggc attctgtatc tctccgccaa aatccccgtc
     2701 gaggtgctac ggcgctttcc gcgtccgcgg cgcggtcagc ccgacgacga agcggtcgtg
     2761 gcgcgccgct gggccatgac ctacctcgcg gccttcgccg ggctcggcgt cggcatcttc
     2821 tttctgtcct tctcctatca ctacgtgctt tggatttatc tgggtctcgc gggagcgctc
     2881 tattcggcgg tgcgctcgca cgcgccctgg tttcgcgtgc ggctgcgcgc gctcgacggc
     2941 gtggcactcg tgctgatcga tggtgcgatt attgctctcg tttacctcta cacgcatgcc
     3001 gcgcacgcct aacaccactg ccgaagtttt cggcacgagc agatcacgat cggcgcgggt
     3061 cgccagggcc aagaaagcac cggcgaggcc ggcgcattgc tgctttcttc tgcgcccgag
     3121 acgcaagacg ttccccccgc aacccctgtt ccagacgagt caccagcgcg gccaagttca
     3181 cccccgaaat gcaaatctac ggcagtagta ctaaaggatg atcatgttcc gtttgcgcac
     3241 actggctctc atcggtggac tcctgatcgt ggtcgccgcc tgcgtgcgct tcgggctcaa
     3301 gcacgtcggt tcgcgcgagc gtgtcgtaga ggcgacgcat acgcccatca cgggactcgg
     3361 cccggcgacg ctcgcgcccg tgcagcccgc gggcggcgcg cggcgcatcc tgctcgacac
     3421 ggccgcgctc gcgcgcctgc gtgagtccgc gcgcgcacga acggagccgt atcgcttcgt
     3481 gctcgcgcgc gccgacgagg cgctcgcaaa gccggtggaa tccggttacc aaggcttcga
     3541 atgggcggat gccgtcgccg atctcgcgct gatttggcac gccacgggcg acgcgcgcta
     3601 tgcggagggc gcgctcaggt acttgaacgc cttgctcgat gaccgcctgg ccgtcggcga
     3661 tcactagggt ggcgacgacg tggtgca
//
LOCUS       DATIML010000265         3213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5540081, whole genome shotgun sequence.
ACCESSION   DATIML010000265 DATIML010000000
VERSION     DATIML010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3213
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5540081"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..1016)
                     /locus_tag="VLJ38_04605"
     CDS             complement(123..1016)
                     /locus_tag="VLJ38_04605"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSU38821.1"
                     /translation="MLEWNDLRFFLAIHRARTLAGAARTLDVEHTTVGRRLTAMERAL
                     GATLFVRTPGGLLPTESAGQILPLAEQAERAVQDIERIALGEDGRPEGTVRITTSETF
                     ATFLGRRLGELRAKHPGITVEVLAGNANLDLTRREADLAVRLAPTTQPDLVCRKLATA
                     GWSAYASRSYVEARGKPSPITALATHDIIAFNDTLAKVPGALWLEAHGQGANVVLRSG
                     SIPAAWNAALGGLGIVLVPCFLAEGEDRMLRLTPELLGTRDVLLVAHPDLTRVARVRL
                     VMDFLVERFTRDASLLAGTPG"
     gene            1109..2128
                     /locus_tag="VLJ38_04610"
     CDS             1109..2128
                     /locus_tag="VLJ38_04610"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HSU38822.1"
                     /translation="MHDSAAIPPPAQVFGLVSGMWAAKAAATAASLRIPDVLAQGPKT
                     AAEVAKAIGADASAVFRLMRGVASVGVLRLEAEGRFALTPVGELLRSDVPGSMRSLLV
                     AEMAPGHWLPWGDLEGAVRTGKPSAPKALGMDLWEYYQKNADEGFHFAEAMTGLSSLA
                     LEAVLAAYSFTGAQKVVDVGGSHGAFLAAVLKREPNARGVLFDRPDVIEGAGATLAGA
                     GVAARVERVGGSFFEGVPAGGDVYLLKHILHDWSDDECVTILRHVREATAPGARVVVV
                     EMLVTDGGPPSPAPLLDLNMLVMLTGKERTADEFAALFTKAGLALAGVTPTHSPFAVL
                     EARRA"
     gene            complement(2162..2914)
                     /locus_tag="VLJ38_04615"
     CDS             complement(2162..2914)
                     /locus_tag="VLJ38_04615"
                     /EC_number="2.5.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF015875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016432 - tRNA-uridine
                     aminocarboxypropyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-uridine aminocarboxypropyltransferase"
                     /protein_id="HSU38823.1"
                     /translation="MSLRRGALGVRAGRDALPRRAIVRASVEHPTCKSCRRPKAACVC
                     DRIESYATTRRVLILQHPQERDALLGSAQILTASLPKAQIVVGLSWRNLAHALGEEGV
                     DASRWAVLFPDRETPGDHVTTRRGAPLDPKSLAGIVVLDGTWSKAKTLWWRNPWLNKL
                     NRLSLTPARPSIYGHLRAEPRREFVSTLESVAHALTLCGEAPEIQAGLERVFRTLVQR
                     VRDAKLIPPPAHRPPRRAAPARRAPAPRKTST"
     gene            complement(2848..>3213)
                     /locus_tag="VLJ38_04620"
     CDS             complement(2848..>3213)
                     /locus_tag="VLJ38_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38824.1"
                     /translation="YENRALSRLGTLPARGDVPKLAPLLSVARRLRSPSRARLREEGL
                     FTLLGAFDHPALTGRYASAELVLTFTARRITAKLPSGDELTSRRDLGAFVGSIYSPCR
                     CGEVRSVFVPAVTRCRGGL"
BASE COUNT          485 a         1059 c         1153 g          516 t
ORIGIN      
        1 cgccgctcgt agcggggcaa ctctcaagtc gcccgatgct ggctccattc tgaatgccgc
       61 gcgcaatgcg gagatccgat gaagcatgag actgcggcgg gtgttcggcg ggctcgaatc
      121 gactaccccg gcgttcccgc gagcagcgac gcgtcacgcg tgaagcgctc gacgagaaag
      181 tccatcacga gtcgtacgcg cgcaacacgc gtgagatcgg gatgggcgac gagcaacacg
      241 tcacgagttc cgagcagctc cggggtgagg cgcagcatgc ggtcttcgcc ttcggcgagg
      301 aagcacggaa cgagcacgat gccgagcccg ccgagcgccg cgttccaggc cgcggggatg
      361 ctgccgctcc ggagcacgac gttcgcgcct tgcccatgcg cttcgagcca caacgcgccg
      421 ggcactttcg ccagggtatc gttaaacgcg atgatgtcgt gcgtcgcaag cgccgtgatc
      481 gggctcggct tgccgcgggc ctcgacgtaa cttcgcgacg cgtaagcaga ccaaccggcg
      541 gtcgcgagct tccggcacac gaggtcgggc tgcgtcgtcg gcgctaatcg gacggcgagg
      601 tcggcctcgc ggcgcgtcag atcgaggttg gcgttgccgg cgagcacctc gacggtaatg
      661 ccggggtgct tcgcgcggag ctcgccgagg cgccggccga ggaacgtggc gaacgtttcg
      721 gacgtcgtga tgcggaccgt gccttcgggg cggccgtctt cgccgagcgc gatgcgttcg
      781 atgtcttgca cggcgcgttc ggcttgctcg gcgagcggca agatttgacc ggcgctctcc
      841 gtcggcagca ggccgccggg cgtccgtacg aacagcgtgg cgccgagcgc gcgttccatt
      901 gccgtgagtc gacgacccac ggtcgtgtgc tccacgtcga gcgtcctcgc cgcgcctgcg
      961 agcgtcctcg cgcgatggat cgcgaggaag aagcgcaagt cgttccactc gagcacgcgt
     1021 gcattctcgc acggggtccg tgcgcccgta ggggattccg cggccgtggc agctcgctct
     1081 aggctgcgtg tcgaaagagg tgagcaacat gcacgattca gcagcgatcc ccccgccagc
     1141 ccaagtcttc ggcctcgttt ccggaatgtg ggcggccaaa gctgccgcca ctgcggcgag
     1201 cctgcgcatt cccgacgtcc tcgcccaggg accgaagaca gccgccgagg tcgccaaggc
     1261 aatcggtgcg gacgcgtcgg ccgtttttcg cctgatgcgc ggcgtggcgt ccgtcggcgt
     1321 gcttcgcctc gaagccgaag gccgctttgc gctcacgccc gtgggcgagc tgctgcgctc
     1381 cgacgttccg ggctcgatgc ggtcgctgct cgtggccgag atggcgccgg gccattggtt
     1441 gccttggggc gacctcgaag gggccgtccg caccggtaaa ccctcggcgc cgaaggcgct
     1501 cggcatggac ttgtgggagt actaccaaaa gaacgccgac gaaggcttcc acttcgcgga
     1561 ggcgatgacg ggactttcga gcctagccct cgaggccgtg ctcgccgcgt actcgttcac
     1621 gggcgcgcag aaggtcgtcg acgtgggcgg ctcgcacggc gcgttcctcg ccgccgtgct
     1681 caagcgcgag ccgaacgcac gcggtgttct gttcgaccga cccgacgtga tcgagggcgc
     1741 cggcgcgacg ctcgcgggtg ccggggtggc tgctcgcgtc gagcgggtgg gaggcagctt
     1801 tttcgaaggc gtgcccgcgg gcggcgacgt gtacttgctc aaacacattc tgcatgattg
     1861 gagtgacgac gagtgcgtca cgatcctgcg ccacgtgcgc gaggcgacag cgcccggcgc
     1921 ccgcgtggtg gtcgtcgaga tgctcgtcac cgacggcggc ccgccctcgc ccgcgccgct
     1981 gctcgatctg aacatgctcg tcatgctcac cggcaaagag cgcacggccg acgaattcgc
     2041 cgctcttttc accaaggccg ggctcgcact cgccggcgtc acgcccacgc actctccttt
     2101 tgcggtgctc gaggctcgac gcgcctgagg gcattctagg cgtgagcggc gctcgcgagg
     2161 cttacgtcga cgtctttcgg ggcgcaggcg cacgcctcgc gggtgccgct cggcgtggcg
     2221 gtcgatgtgc gggcggcggg atgagcttcg cgtcgcggac gcgttggacg agggtgcgaa
     2281 agacgcgctc gaggccggct tggatttccg gcgcttcgcc gcagagcgtc agggcgtggg
     2341 cgacggattc gagcgtcgag acgaattcac gccgcggttc ggcgcgcaaa tgaccgtaaa
     2401 tcgagggccg agccggcgtg agcgagaggc ggttcagctt gttgagccac ggattgcgcc
     2461 accacaaggt tttcgctttg gaccaggtgc cgtcgagcac cacgatgccg gcgagcgact
     2521 tggggtcgag cggcgcgccg cggcgcgtgg tcacgtgatc tcccggggtc tcgcgatcgg
     2581 gaaagagcac cgcccagcgg ctcgcgtcta cgccctcttc gccgagcgcg tgcgcgaggt
     2641 tgcgccagct cagacccacg acgatttgcg ctttcggtaa gctcgccgtc aggatttgcg
     2701 ccgaaccgag cagggcgtcg cgttcctgcg gatgctgaag gatgagcacg cggcgcgtcg
     2761 tcgcgtagga ctcgatgcgg tcgcaaacgc acgcagcttt cggccgacga cagctcttgc
     2821 aagtgggatg ctccacgctg gctcggacta tagcccgccg cggcagcgcg tcacggccgg
     2881 cacgaacacc gagcgcacct cgccgcagcg acacggcgag tagatgctac ccacgaacgc
     2941 tccgaggtct cgccgcgacg tgagttcgtc gccggacggc agcttggccg tgatgcgccg
     3001 cgccgtgaac gtgagcacga gctccgcgct cgcgtagcgt cccgtgagcg cggggtgatc
     3061 gaacgcaccg agcagcgtga acagaccttc ctcgcgcagc cgagcgcgcg acggcgagcg
     3121 caggcgtctc gcgacggaga gcaagggcgc cagtttcggc acgtcgccgc gtgccggcag
     3181 cgtgccgagg cgcgagaggg cgcggttttc gta
//
LOCUS       DATIML010000266         4382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1496405, whole genome shotgun sequence.
ACCESSION   DATIML010000266 DATIML010000000
VERSION     DATIML010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4382
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496405"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..1341)
                     /locus_tag="VLJ38_04625"
     CDS             complement(142..1341)
                     /locus_tag="VLJ38_04625"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HSU38825.1"
                     /translation="MNDEPVKFLLVDDVEENLVALEALLRRDGLELLKARSGTEALEL
                     LLKHDVALAFLDVQMPGMDGFELAELMRGAERTKRVPIIFVTAGTSDPWRVFKGYESG
                     AVDFLHKPIEPHVLRGKADVFFELYRQGREWARALQLNEMFVGILGHDLRNPLGALLT
                     GAALLQAQIKDPKQLRTLQRMTSAGRRMTEMIEQLLDLTRARLAGGLGFGDARHNVDV
                     TGLAQRAVEELQAVHPERRIVVLGAAGATTLGDPDRLLQLFSNLVANALHHGKADAPV
                     HVEVSVSAEDVTFSVQNGGTIPAELLPTLFDPFRRRPTQRAHSQGLGLGLYISQQIAL
                     AHDGRIQVTSSEEGGTLFTLRIPRRSLGARPPEGEDSATGVLIVDDERDTRESLEREL
                     YQSESSA"
     gene            complement(1338..1952)
                     /locus_tag="VLJ38_04630"
     CDS             complement(1338..1952)
                     /locus_tag="VLJ38_04630"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HSU38826.1"
                     /translation="MEESHAKAIVIGGSSGAIDALGVILPALPRDLFVPLAIVLHVPP
                     SKPNGLVDLFRTTTPLTVKEAEDKEPLAPGTVYFACPSYHLLVERGGYFSLSVDEPVH
                     FSRPAIDVLFESAADAYGQALAGVLLSGANEDGARGLSRILAAGGTTVVQDPNTASAR
                     QMPESALRDGAAHRVLPPRDIAPYLVHFAADHCAPGRSPVKEHA"
     gene            complement(1971..2792)
                     /locus_tag="VLJ38_04635"
     CDS             complement(1971..2792)
                     /locus_tag="VLJ38_04635"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HSU38827.1"
                     /translation="MTLDRAEPREFGSLLEAIFERYHYDFRHYAEASLRRRLAAALAH
                     FGYAELSELHARVLADRQVFTELLRFLTVQVSDLFRDPGYYRALREHVVPVLQTYPSL
                     KVWVAGCATGEEAYSLAILLREEGLLERTQIYATDIHPESLRIAEEGVYALDRLARFS
                     ENYLLGGGRASLADYYVARYSSAVLDRSLKRSILFADHSLATDSVFAEMQLVSCRNVL
                     IYFERELQDRAIGLLHDSLCRRGFLGLGSKDSLRFSTHALSFAEFLPDVRVYQRR"
     gene            complement(2789..>4382)
                     /locus_tag="VLJ38_04640"
     CDS             complement(2789..>4382)
                     /locus_tag="VLJ38_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU38828.1"
                     /translation="VQGATLAFDVKDTGIGIATEQHDVIFEAFRQADGTTNRKYGGTG
                     LGLSISRDLARLLGGELGLTSAPGRGSTFTLTLPEEYVEKGPARTAPEAPALPRAPKP
                     TNGASKAANGAATTTNGAEPRQDEPPATLPDDREGLGPGSRAILVIEDDAAFARILYD
                     LSHELDFKAILAQTAEAGLALAERYVPSAIVLDVGLPDRSGLSVLDTLKHSPATRHIP
                     VHMFSVADHAQTALEMGALGYALKPLKREELFQAFQKLEAKFTQKLRRVLVVEDDATA
                     RESTCRLLAGDGVETVGVGTAADALATLRTSPFDCMVLDLSLPDRSGFELLEEMTANA
                     SSPPPVIVYTGRSLSREEEQSLRRFSTSIIIKGARSPERLLDEVTLFLHQVEAELPAD
                     RRRMLKTAREREAVFEGRRVLIVEDDVRNIFALTSVLEPRGAKIEIARNGREAVEHLR
                     DKPGVDLVLMDIMMPEMDGLEAMRKIRERRELSRLPIIALTAKAMADDRENCLAAGAN
                     DYIAKPVDVDKLLSLARVWMPK"
BASE COUNT          710 a         1399 c         1548 g          725 t
ORIGIN      
        1 cggacaggac acgcagcgcc tctcgtccgt cgcccgccga gtccacgccg tagccctctt
       61 cctcgagcac ctcgacgacc gattcgcgga tgtcgtgatc gtcttcgatc accaaaatcc
      121 ggggctgcct gccggcggag atcacgccga agactccgat tggtagagct cccgttccag
      181 cgattcacgt gtgtcgcgct cgtcgtcgac gatcagcacg cccgtggcgg aatcctcgcc
      241 ttcaggcggg cgtgcgccga gcgagcggcg cgggatgcgc agcgtgaaca gcgtgccgcc
      301 ttcctcgctc gaagtgactt ggatacggcc gtcgtgagcg agcgcgattt gctgcgaaat
      361 gtagaggccg agacccaagc cttgggagtg tgcgcgctgc gtgggacgcc ggcggaaggg
      421 atcgaacagg gtgggcaaga gctccgcggg gatcgtgccg ccgttctgaa cgctgaacgt
      481 cacgtcctcc gcggacacgc tgacctcgac gtgcaccggc gcgtccgcct taccgtggtg
      541 gagcgcgttc gcgaccaggt tcgagaaaag ctgcagcagc cgatcgggat cgccgagcgt
      601 cgtggcgccg gcggctccga ggacgacgat gcggcgctcg gggtgaacgg cctgtagctc
      661 ctcgacggcg cgttgcgcga ggcccgtcac gtcgacgttg tgtcgcgcgt cgccgaagcc
      721 gagcccgccg gccagtcgcg cgcgcgtgag atcgagcagc tgttcgatca tctcggtcat
      781 gcgccggccc gccgacgtca tgcgctgcag cgtgcggagc tgtttcgggt ccttgatctg
      841 ggcctggagc agcgcggcgc ccgtgagcag cgcgccgagg ggatttctga ggtcgtgtcc
      901 gagaatgccc acgaacatct cgttcagctg caaggctcgg gcccactcac ggccctggcg
      961 gtagagctcg aagaagacgt cggccttgcc gcgcaagacg tgcggctcga tcggcttgtg
     1021 cagaaagtcc acggcgccgc tctcgtagcc cttgaacacg cgccaggggt cgctcgtgcc
     1081 tgccgtgacg aagatgatgg gcacgcgttt ggtgcgctcg gcgccgcgca tgagctcggc
     1141 gagctcgaac ccgtccatgc cgggcatctg cacgtcgagg aacgccagcg ccacgtcgtg
     1201 tttcagcagc agctcgagcg cttcggtgcc ggagcgggcc ttcagcagct cgagcccgtc
     1261 gcggcggagc agcgcctcga gcgcgacgag attctcttcg acgtcgtcga ccaacaggaa
     1321 cttcaccggc tcgtcgttca tgcgtgctcc ttcacgggag agcgtcccgg ggcgcagtgg
     1381 tccgcggcga aatgcacgag gtaaggcgcg atgtcgcgcg gtggcaacac acggtgcgcc
     1441 gcgccgtccc gcagcgcgga ctcgggcatt tggcgcgcgg aagcggtgtt ggggtcttga
     1501 accacggtag ttccgccggc ggcgagaatt cgggagagac cacgtgcgcc gtcttcgttg
     1561 gcgccggaga ggaggactcc tgcgagcgct tgcccgtagg cgtcggctgc ggattcgaat
     1621 agcacgtcga tcgcgggacg cgagaagtgt acgggctcat cgacggacag ggaaaagtag
     1681 ccgccccgct cgacgagcag gtgatagctc gggcacgcga agtagaccgt ccccggcgcg
     1741 agcggctcct tgtcctcagc ctctttgacc gtgagcggcg tggtcgtacg gaacaagtcg
     1801 acgagtccat tcggtttgct cggaggcacg tggagcacga tcgcgagcgg gacaaaaagg
     1861 tcacgcggca gtgccggcaa aatcacgccg agcgcgtcga tcgcccccga cgaacctccg
     1921 atgacgatgg ctttggcgtg actttcttcc aagattggct cgcctcgagg ttaacgccgc
     1981 tggtagacgc gcacgtccgg caagaattcc gcgaaagaca gtgcgtgcgt ggaaaaacgt
     2041 aggctatcct tcgagccgag cccgagaaac ccgcggcggc agagcgaatc gtgcaagagg
     2101 ccgatggccc gatcctgcag ctcgcgctcg aagtagatga gtacgttgcg gcaggacacg
     2161 agctgcatct cggcgaacac gctgtccgtc gcgaggctgt ggtcggcgaa caggatcgag
     2221 cgcttgagtg agcgatcgag cacggccgac gagtagcgcg cgacgtagta gtcggcgagc
     2281 gatgcgcgcc cgccgccgag caagtagttc tcgctgaagc gcgcgaggcg atcgagcgcg
     2341 tagactccct cctcggcgat gcgcaggctt tcgggatgaa tgtcggtcgc gtaaatctgc
     2401 gtgcgctcga gcagcccttc ctcgcgcagc agaatggcga gtgagtaggc ctcttcgccc
     2461 gtcgcgcaac cggcgaccca gaccttgagc gagggatacg tctggagcac gggcacgacg
     2521 tgctcgcgca gggctcggta gtagcccgga tcgcggaaca aatcgctcac ctgcacggtg
     2581 agaaagcgca agagctccgt gaacacttgg cgatcggcga gcacgcgcgc gtggagttcg
     2641 gagagctcgg catagccgaa gtgcgcgaga gcggcggcga gtcggcgcct gagcgaagct
     2701 tcggcgtagt ggcggaagtc gtagtggtag cgctcgaaga tggcctcgag caagctgccg
     2761 aactcgcgcg gctcggcgcg gtcgagcgtc acttcggcat ccatacgcgc gccagggata
     2821 ggagtttatc gacgtcgacc ggtttggcga tgtaatcgtt cgcgcccgcg gcgaggcaat
     2881 tctcgcggtc gtccgccatg gccttggccg tgagcgcgat gatgggtagg cgcgaaagct
     2941 cgcgtcgctc gcggatcttg cgcatggcct cgaggccgtc catctcgggc atcatgatgt
     3001 ccatcagcac gagatccacg cccggcttgt cgcgcaagtg ctcgacggct tcgcgtccgt
     3061 tgcgcgcgat ttcgatcttg gcgccgcgcg gctcgagcac gctcgtgagc gcgaagatgt
     3121 tgcggacgtc gtcctcgacg atgagcacgc gacgcccttc gaacactgct tcacgctcgc
     3181 gcgcagtctt gagcatgcgg cgtcgatccg cgggcaactc ggcctcgact tggtgcagaa
     3241 acagcgtcac ttcgtcgagc agccgctcgg gcgaacgcgc gcccttgatg atgatcgagg
     3301 tcgaaaagcg ccggagcgac tgctcttcct cgcgcgagag cgagcggccc gtgtacacga
     3361 tcacgggcgg cggcgagctc gcgttggcgg tcatttcctc cagcagctcg aagccgctgc
     3421 ggtccggcag cgacagatcg agcaccatgc agtcgaaggg cgaggtgcgg agcgtggcga
     3481 gcgcatcggc ggccgtcccg acgccgaccg tctcgacgcc gtcgcccgcg agcaagcggc
     3541 aggtgctctc gcgcgccgtg gcgtcgtcct cgacgaccag cacgcgcctg agcttctgcg
     3601 tgaacttcgc ctcgagcttc tggaaggcct ggaacagctc ctcgcgcttc agcggcttca
     3661 gcgcgtaacc gagcgctccc atctcgagcg ccgtttgggc gtggtcggcg acggaaaaca
     3721 tgtgcacggg gatgtgccgc gtcgcgggcg agtgtttgag cgtgtcgagg accgacagcc
     3781 ccgagcggtc gggcaagccc acgtcgagca cgatcgcgct cggcacatag cgctcggcga
     3841 gcgcgagccc cgcctcggcg gtctgcgcga ggatcgcctt gaaatcgagc tcgtgcgaga
     3901 ggtcgtagag gatgcgcgcg aacgccgcgt cgtcctcgat cacgaggatg gcgcgcgagc
     3961 cggggccgag cccctcgcgg tcgtcgggga gggtggcggg gggctcgtct tgacgtggct
     4021 ctgcgccgtt cgtcgtcgtc gcggccccgt tcgctgcttt gctcgcaccg ttcgtcggct
     4081 tcggtgcgcg cggcaacgcg ggcgcctcgg gcgccgtgcg cgccggtcct ttctcgacgt
     4141 actcctcggg caaggtgagc gtgaaggtgc tgccgcggcc cggcgcgctc gtgaggccga
     4201 gctcgccgcc gagcaagcgc gccagatcgc gcgaaatcga caagccgagt ccggtcccgc
     4261 cgtacttgcg attggtcgtg ccgtcggcct ggcggaacgc ctcgaaaatc acgtcgtgct
     4321 gctcggtcgc gatgccgatg ccggtgtctt tcacgtcgaa cgcgagcgtc gcgccttgca
     4381 cg
//
LOCUS       DATIML010000267         5603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1209063, whole genome shotgun sequence.
ACCESSION   DATIML010000267 DATIML010000000
VERSION     DATIML010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5603
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209063"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>5603)
                     /locus_tag="VLJ38_04645"
     CDS             complement(<1..>5603)
                     /locus_tag="VLJ38_04645"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU38829.1"
                     /translation="DPGNAEALAALERIGQDPVHGLAIAEILEPLYRAHGEHQKLIGV
                     HEVQVAQADGAERKVELLHQIAGLYEDSAGDANSAFDTLARALAVDPSQAETRQNIDR
                     LARVTGRLLDLAQVYERLAAEQRDPELGSQLYSAAARVFEQDVPNIDRAIDLYQRVLA
                     IDPANLEAAEALQGLFQGSERYAEMSAILQRKAAVLEDVDAQKQALYQAALLEEEVLE
                     RPREAIAVYQKVLDIDAEDVRSIDALVKLYLSLSAWEELLAVYTKKVDLLLDPAEKKL
                     ILYQVGAVFERELSDVKRAIDTYQRILELDPDDLTALSRLDVLYQTAGNYSELLNVLT
                     HEAELTQDPIESVSYQYRIAELYERHLGDVERAVELYRDILNVVPDHAPTLGALEGIK
                     SGTRAPLAAAAVLEPVYESMGEYAKLISVFEVQTRATEDPFTRVELLHRIARLYEENL
                     SDHVRAFETYARAVAVDSQNEESLGALERLATFIERWPAVAALYDAELDKLVETPERF
                     VELGLRVAQVYEVQLDNVEAAVTRYRRVLDADSENQGAVRSLDRLFTQTERWSDLAEI
                     LAREAEIGQSPEEILEFKFRLGQVYQTRLNDLERAIGAYREVISAAPEHQDTVRALEA
                     LFESGVRQAEIAQILEPLYQASSEWEKLIRVREAELAQTTDRDERVTLHHRIAEDAEE
                     RLLDPVLAFNVYVRAIKEAPLDERTGSEIERLASMLDGGWEPLANAYADVLGIEGIEP
                     ATQAVIGKRLARVFEEELADVAKAEETYRYVLTVAPEEAEALGHLDRIYTSLEQWPEL
                     AGVLEQRVLVADGTADKVELSTRLGEVYEERLGQVADAVRAYRRIFDELEPANETAII
                     ALARIYQQTENWTELQKVYERELENAAGDVQEAEIRAKMAHLAADRLGNKEAAVEGWK
                     RVLDLRGEDPEALRALAGLYEDQARWAELTDVLERHFDIAESDEDRVAVLVRRARLFA
                     EQLHRDDEALETWQRVLDIDFSNVAALRAIANVWRTRKDPQELVAALHATIDRAAALL
                     EPSELKEVYRELGQTYGRVLEQPFEAAEAWRHLLDVDSTDFEAMAELEKIYRADGRWP
                     EVVGVKMQRAEALSEPTEKIRELLEVGEIWKKEVNDYDQATPAFEKILTVDPTHQEAF
                     DALERLHTAAERWEPLIELYLNRLETRETASEKSDILRRIAHVFEDKLGDNNQAFDAL
                     VNAFSEDFGDDETARFLEHMAQVTNRWTELITAANGWLQDQTEPKLRIQLCLRLSKWY
                     GEDLGHPEYAQPYYQQIMALDPNNVQVLRQMAAIHRMGAQWQRVGETLQRALDVAVLN
                     DDRKMILVDLGELLERNMGQAEQGISYYKRALEIDSLYLPALSALERIYEERQNQAEL
                     VQILTSKVAALTDHDQIASIKLRIATLYEQSLGDFERAGKVYREVLELDGTSLVALRG
                     VERVSERLSDWPELVRVLERELDVLETERERVEVLLKLAQNLEEHFLKFDQAAQRLEQ
                     ALEISPAEERAYVALARCYRRLKQWLDLIHTYERHVSEAASSATKVEVYGQIAQVYSD
                     EVGDVDRAIDAYRNIVDLDDTNIQALSELAKLYEKQGDAAQSIEAMTRVADLTTDGVQ
                     RVEMYYRIGKALDEKLADRVQARERFEMALDLDPTHLPTLAALRTIAIDEADWDRAAR
                     YLEQEQAHTPSARARAKLLVELGKVRDEMLGEHDAAVQAWELAIQADPDCEEAALPLV
                     QEYVRIARWTQAEPLAEMLVKKSKGKDRQEQHMLQKLLGKVHAALGNFEKSLKAYQTA
                     NQLDVTDQETIRGIADVAYELKDWPSALTNYQKVLTALSEDDTEQRTDVYYRLGNIKR
                     EQNQARQAINNYEKALALNADHRPTL"
BASE COUNT          796 a         1883 c         1851 g         1073 t
ORIGIN      
        1 agcgtcggcc ggtgatcggc gttgagcgcg agcgccttct cgtagttgtt gatggcttgg
       61 cgcgcctggt tttgctcgcg cttgatgttg ccgaggcgat agtagacgtc cgtgcgttgc
      121 tcggtgtcgt cctcgctcag cgcggtgagc accttctggt aattcgtgag cgcgctcggc
      181 caatccttga gctcgtaggc gacgtcggcg atgccgcgga tcgtctcctg atcggtcacg
      241 tcgagctgat tggccgtttg ataggccttg agtgacttct cgaagttgcc tagcgcggcg
      301 tgcaccttgc cgaggagctt ctgcagcatg tgctgctcct ggcggtcctt gcccttgctc
      361 ttcttgacga gcatctccgc gaggggctcg gcctgcgtcc aacgcgcgat gcgcacgtac
      421 tcctggacga gcgggagcgc ggcttcctcg cagtcgggat ccgcctgaat cgcgagctcc
      481 caagcctgca cggcggcgtc gtgctcgccg agcatttcgt cacgcacctt accgagctcg
      541 accaggagct tcgcgcgagc gcgcgccgac ggcgtgtgcg cctgctcctg ctccaggtag
      601 cgcgccgcgc gatcccagtc ggcttcgtcg atcgcgatgg tgcgtagggc cgccagcgtc
      661 ggcaggtgcg tcggatcgag atcgagcgcc atctcgaagc gctcgcgcgc ctgcacgcga
      721 tcggcgagct tttcgtcgag cgccttgccg atgcggtaat acatctcgac gcgctgcacg
      781 ccgtcggttg tgagatcggc gacgcgcgtc atcgcttcga tggactgcgc ggcgtcaccc
      841 tgcttctcgt agagcttcgc gagctccgag agcgcttgaa tgttcgtatc gtcgaggtcg
      901 acgatgttgc ggtacgcgtc gatggcgcgg tctacgtcgc cgacctcgtc gctgtagacc
      961 tgcgcgatct gtccgtagac ctcgaccttc gtggccgagc tcgcggcctc tgaaacgtgc
     1021 cgttcgtaag tgtggatcag atcgagccac tgcttgaggc ggcggtagca gcgcgcgagc
     1081 gcgacgtaag cgcgctcctc ggccggtgaa atctcgagcg cctgctcgag tcgctgcgcg
     1141 gcctgatcga acttgaggaa gtgctcctcg aggttctgcg cgagcttcaa gagcacctcg
     1201 acgcgctcac gctcggtttc gagcacgtcg agctcgcgct cgagcacgcg tacgagctcc
     1261 ggccagtccg agagccgctc gctcacgcgc tcgacgccgc gcaacgccac gaggctcgtg
     1321 ccgtcgagct cgagcacctc gcggtacacc ttgccggccc gctcgaaatc gcccagcgat
     1381 tgctcgtaca gcgtcgcgat gcggagcttg atgctcgcga tctgatcgtg gtccgtgagc
     1441 gcggcgacct tgctcgtgag gatttgcacg agctcggcct gattttggcg ttcctcgtag
     1501 atacgttcga gcgcgctgag cgccggcagg tacagcgaat cgatctcgag cgcgcgcttg
     1561 tagtagctga tgccctgctc ggcctgcccc atgttccttt cgagcagctc gccgagatcc
     1621 acgaggatca tcttgcggtc gtcgttcagg accgcgacgt cgagggcgcg ctgcagcgtc
     1681 tcaccgacgc gctgccactg ggcgcccata cggtgaatcg ccgccatctg gcgcaggacc
     1741 tgaacgttgt tcgggtcgag cgccatgatc tgctggtagt aaggctgcgc gtactccggg
     1801 tgaccgaggt cctcgccgta ccacttgctc agccgcaagc agagctgaat gcggagcttg
     1861 ggctccgtct gatcctgaag ccagccgttg gccgccgtga tgagctcggt ccagcgattg
     1921 gtgacctgcg ccatgtgctc gaggaagcga gccgtctcgt cgtcgccgaa gtcctcactg
     1981 aacgcgttca cgagggcgtc gaacgcctga ttgttgtcgc cgagcttgtc ctcgaagacg
     2041 tgcgcgatgc gccgcaagat gtcgctcttc tcgctcgccg tctcgcgcgt ctcgagccgg
     2101 ttcaggtaga gctcgatcag cggctcccag cgctcggccg ccgtgtgcag gcgctcgagc
     2161 gcgtcgaacg cctcctggtg cgtcggatcg acggtgagga tcttctcgaa cgcaggcgtc
     2221 gcctggtcgt agtcgttgac ttccttcttc cagatttcgc ccacttcgag gagctcgcgg
     2281 atcttctccg tcggctcgct cagcgcctcg gcgcgctgca tcttgacgcc gaccacttcc
     2341 ggccagcgtc cgtcggcgcg atagatcttc tcgagctcgg ccatcgcctc gaagtcggtc
     2401 gaatcgacgt cgaggaggtg gcgccacgcc tcggccgcct cgaacggctg ctcgagcacg
     2461 cgaccgtagg tctggccgag ctcgcgatag acctctttga gctcgctcgg ttcgagcagg
     2521 gccgccgcgc gatcgatcgt cgcgtgcagc gccgccacga gttcctgcgg atccttgcgc
     2581 gtgcgccaga cgttggcgat ggcgcgcaga gccgcgacgt tcgaaaaatc gatgtcgagc
     2641 acgcgctgcc acgtctcgag cgcctcgtcg tcccggtgca gctgctcggc gaacaagcgc
     2701 gcgcggcgta cgagcaccgc gacgcggtct tcgtcgctct ccgcgatgtc gaaatgccgc
     2761 tcgagcacgt ccgtcagctc ggcccaccgc gcttgatcct cgtacagacc ggcgagcgcg
     2821 cgcagcgctt ccggatcctc gccgcgcaga tcgagcacgc gcttccagcc ttcgaccgcc
     2881 gcttccttgt tgccgagccg gtcggccgcg aggtgcgcca ttttcgcgcg gatctccgct
     2941 tcctgcacgt cgccagccgc gttttcgagc tcgcgctcgt acaccttctg gagctcggtc
     3001 cagttctccg tctgctgata gatgcgcgcg agcgcgatga tggccgtctc gttcgccggc
     3061 tcgagctcgt cgaaaatccg gcgataagcg cgtacggcgt ccgcgacctg gccgaggcgc
     3121 tcctcgtaca cctcgccgag ccgcgtcgac agctcgacct tgtccgcggt gccgtccgcg
     3181 acgagcacgc gctgttccag cacgccggcg agctcgggcc actgctcgag cgaggtgtag
     3241 atgcggtcga ggtgcccgag tgcttccgcc tcctcgggcg cgacggtgag cacgtagcgg
     3301 taggtctcct cggccttcgc gacgtcggcg agctcttctt cgaacacgcg cgcgaggcgc
     3361 ttgccgatga ccgcttgcgt cgcgggctcg atgccttcga tgccgagcac gtcggcgtag
     3421 gcgttggcga gcggttccca accgccgtcg agcatgctcg cgagccgttc gatctcgctg
     3481 cccgtgcgct cgtcgagcgg agcctccttg atcgcgcgca cgtaaacgtt gaacgcgagc
     3541 accggatcga gcaggcgctc ctccgcgtcc tccgcgatgc ggtggtggag cgtgacgcgc
     3601 tcgtcgcggt ccgtcgtttg cgcgagctcg gcctcgcgca cgcgaatgag cttctcccac
     3661 tcggagcttg cctggtagag cggctcgagg atctgcgcga tctccgcctg gcgcacgccg
     3721 ctctcgaaca acgcctcgag cgcccgcacc gtatcctggt gctccggcgc ggcgctgatc
     3781 acctcgcggt aggccccgat ggcgcgctcg agatcgttca ggcgcgtctg gtacacctgc
     3841 ccgagccgga acttgaactc gaggatctcc tccgggctct gcccgatctc ggcttcacgc
     3901 gcgaggatct cggcgagatc gctccagcgc tcggtctgcg tgaacaggcg atcgagcgag
     3961 cgcacggcgc cctggttctc ggagtccgcg tcgagcacgc ggcggtaacg cgtgacggcg
     4021 gcctcgacgt tgtcgagctg cacctcgtac acctgcgcga cgcgcaggcc gagctcgacg
     4081 aaccgctcgg gcgtctcgac gagcttgtcg agctccgcgt cgtagagcgc ggcgacggcc
     4141 ggccagcgct cgatgaacgt cgcgagccgc tcgagagcgc cgagcgactc ctcgttctga
     4201 ctgtcgacgg cgacggcgcg ggcgtacgtc tcgaacgcgc gcacgtgatc cgagaggttc
     4261 tcctcgtaga gacgcgcgat gcggtggagg agctcgacgc gcgtgaacgg gtcttccgtc
     4321 gcgcgcgtct gcacctcgaa cacgctgatg agcttcgcgt actcgcccat cgattcgtaa
     4381 acgggctcga gcacggcggc cgcggcgagc ggcgcgcgtg ttccactctt gatgccctcg
     4441 agcgcgccga gcgtcggcgc gtgatcgggc acgacgttca gaatgtcgcg gtaaagctcg
     4501 acggcgcgct cgacgtcccc caggtgtcgc tcgtagagct cggcgatccg gtactggtag
     4561 ctcaccgact cgattggatc ctgcgtgagc tcggcctcgt gcgtgagcac gttcaagagc
     4621 tcgctgtaat tgccggccgt ttgatagagc acgtcgagcc ggctcagcgc cgtaaggtcg
     4681 tccggatcga gctcgaggat gcgctgatac gtgtcgatgg cgcgcttcac gtcgctgagc
     4741 tcacgctcga agacggcgcc cacctgatag agaatcagct tcttctcggc cggatcgagc
     4801 agcagatcga ccttcttcgt gtagacggcg agcagctcct cccacgcgga gagcgagagg
     4861 tagagcttga ccaaggcgtc gatcgagcgg acgtcttccg cgtcgatgtc gagcaccttc
     4921 tggtagacgg cgatcgcctc gcgcggccgc tcgagcactt cttcctcgag cagtgcggcc
     4981 tggtagagcg cctgcttctg ggcgtcgacg tcctcgagca ccgctgcctt gcgctgcaaa
     5041 atcgccgaca tctcggcgta gcgctccgag ccctggaaga gcccctggag cgcttccgcg
     5101 gcctcgaggt ttgccggatc aatcgcgagc acgcgctggt agagatcgat ggcgcgatcg
     5161 atgttcggca cgtcctgctc gaatactcgc gcagccgccg agtagagctg gctgccgagc
     5221 tccggatcac gctgttcggc cgcgagccgt tcgtagacct gcgccaggtc gagcaagcgt
     5281 ccggtgacgc gcgcgagccg atcgatgttc tggcgcgtct cggcttggct gggatcgacc
     5341 gccagcgcac gagccagcgt gtcgaacgcc gaattggcgt cgcccgccga gtcttcgtaa
     5401 agtcccgcga tttggtggag cagctcgacc ttgcgctcgg ctccgtccgc ctgcgcgacc
     5461 tgcacctcgt gaaccccgat gagcttctgg tgctcgccgt gagcgcggta aagcggctcg
     5521 aggatctcgg cgatcgcgag gccgtgcacc ggatcctgac cgatccgctc gagagccgcg
     5581 agcgcttcgg cgttgcccgg atc
//
LOCUS       DATIML010000268         2642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3229816, whole genome shotgun sequence.
ACCESSION   DATIML010000268 DATIML010000000
VERSION     DATIML010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3229816"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..1432)
                     /gene="pcnB"
                     /locus_tag="VLJ38_04650"
     CDS             complement(155..1432)
                     /gene="pcnB"
                     /locus_tag="VLJ38_04650"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:1990817 - poly(A) RNA polymerase activity
                     [Evidence IEA];
                     GO_process: GO:0006378 - mRNA polyadenylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HSU38830.1"
                     /translation="MPPQEPEAPSGGVIETMSAPRSGPEPTIYPIDLEEQIDPDAVKV
                     MRRLVKQGYEAYLVGGGVRDLLVGSTPKDFDVATSARPDDVRRLFRNSRIIGRRFRLV
                     HVLFGGGKVIETATFRRAPQQDDSDSDDLLIRNDNVFGEAHQDAARRDFTINALFYDL
                     EHHVVLDWCGGMPDIERRTVHTIGDPSVRFREDPVRILRAIKFSARLDFGISPEVYDA
                     MVECRATLARAAKPRLFDELLKLLRCGAAHRAFWLLWEIGLLDVLLPELSTFLADQPE
                     DEDTLWRLLDEIDRMTRERGAPLDEVVLVAVLLAEPLKEACQGARDRVEAAYRFLENI
                     VDRLNMPRRIAEPVRRVIAILPRLEGGRAGRFQRTSLYPAALEIATLYARARGEELGD
                     IEAPLAEPAGAPSEGFAPVKRRRRRRKPRPEPA"
     gene            complement(1488..>2642)
                     /locus_tag="VLJ38_04655"
     CDS             complement(1488..>2642)
                     /locus_tag="VLJ38_04655"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSU38831.1"
                     /translation="EEWSLYADDPSFDDDERLWGDMLRTALGVRVVDAPTPPLEIDDL
                     VLAIQGVPTVGLSVEQVEQLARADSASSGNGRSIVVLREGEDAPRELVVEADSTDEDE
                     SEPGESNVAQAKKSSSDAELAVDFVPYGRGTAMVVTIRYVGDDLGERLSNIIEDALGA
                     RTPPIGILLDLRGNGGGSTDGAAAALGIFEPGVPAFPLLHRGQVTEVLAAVSPAESSH
                     WRGPVAVLVDGATASAAEMLAGGLAKYRRGPLLGQRTYGKGCVQEYFRDRVGVGVLRL
                     TTRLYTLPDGSPVQRRGLVPDIFVGPDEPGEHEADTPGTLEPAAGPDVRAPSPAGPSW
                     PSSAGHVGPCPDSVICAALRKAAGTPIARVRPEPAARKRRAPRSLTGSSR"
BASE COUNT          409 a          898 c          921 g          414 t
ORIGIN      
        1 cgcgatctcg acagccgcaa cggcacctac gttcgcctca aggccgaacg cccgctctca
       61 catggcgatt acgtcttcat tgggcggcgg ctgctgcgcg tcgagctcaa cgcgaactga
      121 agcgccgcac ggcgggtagc cgtacggcga gtcattacgc cggttcggga cgcggcttgc
      181 ggcgccggcg gcggcgcttg acgggagcga agccttcgga cggcgcgccc gcgggctctg
      241 cgagcggtgc ttcgatgtcg ccgagctctt cgccgcgagc gcgcgcgtag agcgtcgcga
      301 tttcgagcgc ggcagggtag aggctcgtgc gctggaagcg accggcgcgg ccgccctcga
      361 gccgcggcaa gatcgcgatc acgcgccgca ccggttcggc gatgcgccgc ggcatgttga
      421 ggcgatcgac gatgttctcg aggaagcgat aggcggcttc gacgcgatcg cgcgcgccct
      481 ggcacgcttc cttgagcggc tcggcgagga gcacggcgac gagcacgact tcgtcgaggg
      541 gggcgccgcg ctcgcgcgtc atgcgatcga tttcgtcgag cagccgccag agcgtgtctt
      601 cgtcctccgg ctgatcggcg agaaacgtcg agagctcggg caaaagcacg tcgagcagcc
      661 cgatttccca caacaaccaa aacgcgcgat gcgccgcgcc gcagcggagc agcttcaaga
      721 gctcgtcgaa caagcgcggt ttcgcggcgc gcgcgagcgt cgcgcggcac tcgaccatgg
      781 cgtcgtacac ctcgggcgag atgccgaaat cgaggcgggc cgagaacttg atggcgcgca
      841 ggatgcgcac cggatcctcg cggaagcgca ccgacggatc accgatggtg tgcaccgtgc
      901 ggcgctcgat gtccggcatg ccgccgcacc aatcgagcac gacgtggtgc tcgaggtcgt
      961 aaaagagcgc gttgatcgtg aagtcgcgtc gggccgcgtc ctggtgggct tcaccgaaga
     1021 cgttgtcgtt gcggatcaag agatcgtcgc tgtcgctgtc gtcctgctgc ggcgcgcggc
     1081 ggaaggtcgc cgtctcgatc accttgccgc cgccgaagag cacgtggacg agccggaagc
     1141 gcctgccgat gatgcgcgag ttgcgaaaca ggcgccgcac gtcgtccggt cgagcactgg
     1201 tcgctacgtc gaagtctttg ggcgtcgagc cgaccaagag gtcgcgcacg ccgccgccaa
     1261 ccaggtacgc ttcgtaccct tgcttgacga gacgccgcat gactttgacg gcgtccggat
     1321 cgatctgctc ttcgagatca atcggataga tggtgggctc gggccccgag cggggtgcgg
     1381 acattgtctc gatcacgccg ccactcggag cctccggctc ttgcgggggc atgaggacca
     1441 aggccttggg tttctgctta gcacgtgacg cacacagaag cgtcctttta ccggctcgaa
     1501 cccgtgaggg agcgcggggc ccgacgtttt cgggccgcag gttcgggccg aactcgggcg
     1561 atcggcgtgc cggccgcttt gcggagagca gcgcaaatca cggaatccgg gcagggtccc
     1621 acgtgccccg cgctcgacgg ccagcttgga cccgccgggc tcggggcgcg cacatcgggg
     1681 ccggccgccg gctccagggt gcccggcgtg tctgcctcat gctccccggg ctcgtccggt
     1741 ccgacgaaaa tatctggaac gaggccgcgt cgttggacgg gcgagccgtc gggcagcgtg
     1801 tagaggcgcg tcgtcaaccg gagcacgccc acgccgaccc gatcgcggaa gtactcctga
     1861 acgcagcctt ttccgtaggt gcgctggccg agcagcgggc cgcgccggta cttggcgagg
     1921 ccgccggcga gcatttccgc ggcgctcgcc gtcgcaccgt cgaccagcac cgcaaccggg
     1981 ccgcgccagt gactcgactc agccggtgac acggccgcga gcacttccgt cacctggccg
     2041 cggtgcagga gcgggaacgc cggcacgccg ggttcgaaga tgccgagcgc cgccgcggcg
     2101 ccgtccgtcg acccgccgcc gttgccgcgc agatcgagca aaattccgat gggcggcgtg
     2161 cgcgcgccga gcgcgtcctc gatgatgttc gacaagcgtt cgccgaggtc gtcgccgacg
     2221 tagcggatcg tgacgaccat ggccgtccca cgcccgtacg gcacgaaatc gaccgcgagc
     2281 tcggcgtccg agctcgactt cttggcctgt gcgacgttgc tctctccggg ttcgctctcg
     2341 tcctcgtcgg tgctgtcggc ttcgaccacg agctcgcgtg gcgcgtcctc gccttcccgc
     2401 aacacgacga tggagcggcc gttacccgag ctcgccgaat cggcgcgcgc gagctgctcg
     2461 acttgttcca cgctgagtcc caccgtcggc acgccttgaa tcgcgagcac cagatcgtcg
     2521 atctcgagcg gcggcgtcgg tgcgtcgacg acgcgcacac cgagcgccgt gcgcagcatg
     2581 tcgccccaaa gtcgctcgtc gtcgtcgaag ctcggatcgt cggcgtagag cgaccactcc
     2641 tc
//
LOCUS       DATIML010000269         1656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3229819, whole genome shotgun sequence.
ACCESSION   DATIML010000269 DATIML010000000
VERSION     DATIML010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3229819"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..717)
                     /locus_tag="VLJ38_04660"
     CDS             complement(<1..717)
                     /locus_tag="VLJ38_04660"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU38832.1"
                     /translation="MNRANAEAIQAWDGVLFEKFSRFRELLTAGLSVHGTEALRRHPP
                     REGSRVLDLGCGFGDTTLEIARLVGPLGSATGVDAAPRFVEQAQAETRAAGAANARYF
                     AADVQADDLEGPYDSAFSRFGTMFFASPVAALRNVRKSLKAGGALLMVVWRRREDNGW
                     AHTAELAVREIIPPVEHGSEPTCGPGPFSMAGADTVSAQLLAAGFVDVGFERFDTDIR
                     IGKDLDEALAFAKALGPAGEL"
     gene            complement(743..1435)
                     /locus_tag="VLJ38_04665"
     CDS             complement(743..1435)
                     /locus_tag="VLJ38_04665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HSU38833.1"
                     /translation="MSEHKTPALEQLAEAPIPTRFGLFSLKVYRWDDPQAHPALSKEH
                     CALIMGDLRGRRNVPVRVHSECLTSEVFGSLKCDCREQLERAQAEIAKRGFGAVLYLR
                     QEGRGIGLANKVRAYALQAEGADTVAANEQLHLPVDARTYDVAAAMLLELGVESVEIM
                     TNNPDKVASLKRLGIVIERRLPVLVPATPFSAGYLETKRRLMQHELPSSPLVTSPPDP
                     ADQTSRKRSLAS"
BASE COUNT          265 a          552 c          562 g          277 t
ORIGIN      
        1 cagttcgccg gcgggtccca gtgctttggc gaaagcgagc gcctcgtcca aatcttttcc
       61 gatgcggatg tcggtgtcga agcgctcgaa acccacatcc acgaagcccg ccgcgagcaa
      121 ctgggcgctc accgtgtcgg cgcctgccat ggagaacgga ccggggccgc aagtcggctc
      181 gctcccgtgc tcgacgggcg ggatgatctc acgcacggct aactccgccg tgtgcgccca
      241 gccgttgtct tcacggcgcc gccagacgac catgagcagc gcgccgcccg ctttcaacga
      301 tttgcgaaca ttgcgcaaag ccgcgacggg cgaggcgaag aacatcgtcc cgaagcgcga
      361 gaaagcggag tcgtacggtc cttcgagatc gtccgcctgg acgtcggccg cgaagtagcg
      421 cgcgttggcg gcgccggccg cgcgcgtctc cgcttgcgct tgctcgacga agcgcggagc
      481 ggcatcgacg ccggtcgcgc tgccgagggg gccgacgagc cgggcgattt cgagcgtcgt
      541 gtcgccgaag ccgcagccga gatcgagcac gcgcgagccc tcacgcggcg ggtgacggcg
      601 gagcgcctcc gtgccgtgaa cggagagtcc cgccgtgagt agctcgcgaa agcgagagaa
      661 cttctcgaag agcacgccgt cccacgcttg gatcgcctcg gcgttcgcgc ggttcacgtg
      721 ggcgtgctcc cctcccgtcc gctcagctcg cgagcgagcg tttgcgggac gtctggtcgg
      781 cggggtcggg cggcgaggtc acgagcggac tcgacggcag ctcgtgctgc atcaagcgac
      841 gcttggtctc gaggtagccg gccgaaaacg gcgtcgccgg cacgagcacg ggcaagcggc
      901 gctcgatgac gatcccgagg cgcttgagcg aagccacctt gtcgggatta ttggtcatga
      961 tctcgaccga ttcgacgccg agctcgagca gcatcgcggc cgcgacgtcg taggtgcgcg
     1021 cgtcgaccgg caagtgcagc tgctcgttcg ccgcgacggt gtccgcgcct tcggcttgga
     1081 gcgcgtaggc ccgcactttg ttggcaaggc cgatgccgcg tccctcctgc cgcaggtaca
     1141 gcaccgcgcc gaaaccgcgt ttggcgatct cggcttgcgc gcgctcgagc tgctcgcggc
     1201 aatcgcattt gagcgagccg aagacttcgc tcgtcaggca ctcggagtga acccgcaccg
     1261 ggacattccg ccggccgcgc aagtcaccca tgatgagcgc gcaatgttct ttgctgagcg
     1321 ccgggtgcgc ctgcgggtcg tcccagcgat aaaccttcaa cgaaaagagg ccgaagcgtg
     1381 tggggatcgg cgcttccgcc agctgctcga gagctggtgt cttgtgttcg gacatctcaa
     1441 gcttcccatc ccgagcggtg cctgtgccaa aagcccaatg cttttgctag tgttagcgcg
     1501 gcgctcgtga gttcccgtat aacatgaagc ccgcctgccg cgaggtcaag cccgggcagg
     1561 ctcaggcagc gggtcttctg cccttgccgc tgcccatcag cgccaaaatc gtgtgctcga
     1621 gcgacgcttt cggggggcgc ttcgagccgc ccttca
//
LOCUS       DATIML010000270         3139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4094351, whole genome shotgun sequence.
ACCESSION   DATIML010000270 DATIML010000000
VERSION     DATIML010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4094351"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VLJ38_04670"
     CDS             <1..767
                     /locus_tag="VLJ38_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HSU38834.1"
                     /translation="GEFGAALVRSVKGRVLTTGHRADADVHSVSATLDALGVRADVTT
                     PAGDVRLESRLVGEHNLENLLTALGVLLELGYAPDAAARALSGAPPAPGRLERCDDDT
                     DDVRVLVDYAHTPDALARVLTAVAGITRGELICVFGCGGDRDPGKRPKMGAAVGHGAA
                     RAILTSDNPRSEEPSVIAAQVEAGLGEAGGRYEIELDRARAIERAILEARPGDSVLIA
                     GKGHEPYQIVGSERRAFDDRVEARKALALRRTRGSA"
     gene            767..2188
                     /gene="murF"
                     /locus_tag="VLJ38_04675"
     CDS             767..2188
                     /gene="murF"
                     /locus_tag="VLJ38_04675"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HSU38835.1"
                     /translation="MAGGLPENRARFTLGEVAAATSGVLSPATAAEREVLGVQTDSRA
                     ALAGKLFVALSGERFDGHTFVSDAVKTGAAALLVEREVPASGVPVVRVPSTLAALGAL
                     AGAHRGRFAGRLVGIAGSAGKTTTRSAVGALLELVAPGAVHQTHGNLNNAIGVPLVLL
                     GLEAEHRFAVVEIGTNAPGEVALLTAMAAPDAGVLTLIGIEHSEGLGDLDGIEREEGA
                     LFAGLLAGGIALGNADDARVARQLERAPGARRVRYGFAETAEIRCLARSTDALRQRLT
                     IAVAGRRLELELSLLGAAGVYAALAAVAVTHALGLELPDAPSISLALSRAGEPGRLEV
                     HELADGTVVLDDAYNSNPASALASLKTAAELARERRARLVVVLGEMRELGALSAREHT
                     RVGEAVGQSGAAELVAVSGDARLFVAAAKSAGIAGEFAVDAEAALAAVRGRLRPGDVV
                     LVKASRGVRCERVVAGLVGRGAA"
     gene            2185..>3139
                     /gene="mraY"
                     /locus_tag="VLJ38_04680"
     CDS             2185..>3139
                     /gene="mraY"
                     /locus_tag="VLJ38_04680"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HSU38836.1"
                     /translation="MIYELLYPLRHLPALGWLNVLRYPSFRAIMSALTAMIVSFLVAP
                     WFIAKLRGKQISQIIREEGPASHHAKKGTPTMGGALILLSVLVPTMLWADVKNVFVIA
                     TAAVTAGYGAVGYLDDRLKIQAVSSRGLPGRYKLVGQFAIGGAAIGYLFLASADLPAR
                     WLEMRARLAIPFLAFEKHPVSLPLVLYAVLALVFVVFMSNAVNLTDGLDGLAIGPVMI
                     NAGTYSLWAYVSGSVLFGRPLATYLDVAGFPEMVELTVYGAAVVGAGIGFLWYNTYPA
                     QVFMGDVGSLALGGGLGMLAVFTKNEFLSVLLGGIFFIETVS"
BASE COUNT          414 a         1097 c         1138 g          490 t
ORIGIN      
        1 acggcgagtt cggcgcggcg ctcgttcgga gcgtcaaggg tcgcgtgctc acgacggggc
       61 accgcgcgga cgcggacgtc cattccgtct cggcgacgct cgatgcgctc ggcgtgcgcg
      121 cggacgtgac gacaccggcc ggcgacgttc gcctcgagtc ccggctcgtg ggcgagcaca
      181 atctcgagaa cctgctcacg gcgctcggcg tcctgctcga gctcggctat gcgcccgacg
      241 cagcggcgcg cgcgctcagc ggtgcgccgc cggcccccgg ccggctcgag cgctgtgacg
      301 acgatacgga cgacgtgcgc gtgctggtcg actacgcgca cacgccggac gccctcgcgc
      361 gcgtgctcac ggccgtggcc ggcatcacgc gcggagaact gatctgcgtc ttcggctgcg
      421 gcggcgaccg cgacccggga aagcggccga aaatgggcgc ggccgtcggt cacggcgctg
      481 cccgcgcgat cctcacgagc gacaacccgc gcagcgaaga gccgagcgtc atcgcggctc
      541 aggtcgaagc cggcctcggc gaggcaggcg gccgctacga aatcgagctc gatcgggcgc
      601 gcgccatcga gcgcgcgatt ctcgaggcgc gacccggcga cagcgtgctc atcgcgggca
      661 agggtcacga gccgtaccag atcgtcggca gcgagcggcg cgcgttcgac gatcgcgtcg
      721 aggcgcggaa ggccctcgcg ctcaggcgga cgcgaggtag tgcctgatgg ccggcgggct
      781 gccggaaaat cgcgcgcgct tcacgctcgg tgaagtggcg gcggcgacga gcggcgtgct
      841 ctcgcccgcg acggcagctg aacgcgaagt gctcggcgtg cagacggaca gccgcgcagc
      901 gctcgcgggc aagctgttcg tcgcgctctc gggtgagcgc ttcgacggac acacgttcgt
      961 gagcgacgcc gtcaaaacgg gcgcggcggc gctgctcgtc gagcgtgagg tccctgcttc
     1021 gggcgtgccc gtcgtgcgcg tgccgtcgac gcttgcggcg ctcggcgcgc tcgcgggggc
     1081 gcaccgcggg cgctttgcgg gaaggctcgt gggcatcgcg ggctcggcgg gcaagacgac
     1141 gacgcgcagt gccgtcggcg cgttgctcga gctcgtggcg cccggcgccg tgcaccagac
     1201 gcacggcaat ctgaacaacg cgatcggcgt gccgctcgtg ctgctcggcc tcgaagccga
     1261 gcatcgcttc gccgtcgtcg aaattggtac caacgcgccg ggcgaggtgg ccctgctcac
     1321 ggcgatggcc gcaccggacg ccggggtgct cacgctgatc ggcatcgagc acagtgaagg
     1381 tctcggcgat ctcgacggca tcgaacgcga ggagggcgcg ctctttgccg gacttctagc
     1441 tggcgggatc gcgctcggca acgccgacga tgcccgggtc gcgcggcagc tcgagcgcgc
     1501 tcccggcgcg cgccgcgtgc gttacggttt cgcggaaacg gcggagatcc gctgcctggc
     1561 gcgctccacg gacgccctgc gccagcgcct gaccatcgcg gtcgcggggc ggcggctcga
     1621 gctcgagctg tcgctcctcg gagccgccgg cgtctacgcc gcgctcgcgg ccgtggccgt
     1681 gacgcacgca ctcggtctcg agctgcctga cgcgccgagc atctcgctcg cgctgtcccg
     1741 agcgggcgaa ccgggtcgac tcgaggtgca cgagcttgcg gacggcactg tcgtgctcga
     1801 cgacgcgtac aactcgaacc ccgcgagcgc cctggcgtcg ctcaagacgg ccgccgagct
     1861 cgcccgcgag cgtcgcgcgc ggctcgtcgt cgtgctcggg gaaatgcgcg agctcggcgc
     1921 gctctcggcg cgcgagcaca cgcgcgtcgg cgaagccgtc ggtcaaagcg gagccgccga
     1981 gctcgtcgcg gtgagcggcg acgcgcggtt gttcgtcgcc gctgcaaaga gcgccggaat
     2041 tgccggagaa ttcgccgtcg acgccgaggc ggcactcgcc gccgtgcgcg gccgcttgcg
     2101 cccgggcgac gtggtgctcg tcaaagcttc gcgcggtgtg cgctgtgaac gcgtggtcgc
     2161 gggtctcgtc ggacgaggtg ccgcgtgatc tacgagctcc tttacccgct caggcacttg
     2221 ccggcgctcg gctggctcaa cgtgctgcgc tacccgtcgt tccgcgcgat catgtcggcg
     2281 ctcacggcga tgatcgtctc gttcttggtc gcgccgtggt tcatcgcgaa gctgcgcggc
     2341 aagcagatca gccagatcat tcgcgaagaa ggccccgctt cccaccacgc gaagaagggc
     2401 acgcccacca tgggcggcgc gctcatcctg ctcagcgtgc tcgtcccgac catgctctgg
     2461 gccgacgtga agaacgtctt cgtgattgcg acggcggccg tcacggcggg ctacggcgcc
     2521 gtgggctacc tcgacgatcg gctgaagatc caggccgtga gctcgcgcgg tctgcccggc
     2581 cgctacaagc tcgtcggcca gttcgcgatc ggcggcgccg cgatcggcta cctgtttttg
     2641 gcgagcgccg acttgccggc gcgctggctc gagatgcggg cacggctcgc gattccgttc
     2701 ttggcgttcg aaaagcatcc ggtctcgctg ccgctcgtgc tctacgccgt gctcgcgctc
     2761 gtgttcgtgg tcttcatgag caacgccgtg aacctcacgg acgggctcga cggcctcgcg
     2821 atcggccccg tcatgatcaa cgcgggcacg tactcgctct gggcctacgt ctccggttcg
     2881 gtgctgttcg gccgtccgct cgcgacctac ctcgacgtcg ccggtttccc cgaaatggtc
     2941 gagctcacgg tgtacggcgc ggccgtggtc ggcgcgggca tcggcttcct ctggtacaac
     3001 acctaccccg cgcaggtctt catgggggac gtgggatcgc tggcgctcgg cggcgggctc
     3061 ggcatgctcg cggtcttcac caagaacgag ttcctctccg tgctgctcgg tgggatcttc
     3121 ttcatcgaga cggtcagcg
//
LOCUS       DATIML010000271         7000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1209428, whole genome shotgun sequence.
ACCESSION   DATIML010000271 DATIML010000000
VERSION     DATIML010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7000
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209428"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1068)
                     /locus_tag="VLJ38_04685"
     CDS             complement(<1..1068)
                     /locus_tag="VLJ38_04685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38837.1"
                     /translation="MSVVPLGGLLGVSAPGTTETFGPRFVRLSELANFVGEAESAALL
                     PVLIEPLRPADRGKLAVVLEEAIESALERRGACPPGVGAATDLESSLGDQLYRARLVE
                     VRGLCLFLASLEGAATLGGALDAEDSAVLRFWLDAARTRPVQLLLDESNRALAAYGAP
                     IPLSVLVEARAGTELHDERPETPPHVAPEVAASAETMELSETPPAVTLDELNRVAATG
                     EPHLAGDMARALVHELTRTTAPKGAAFEPAPPSASGETPIVPPVFADESPTVHDAGFD
                     VELAPTYDEISAVHAVGSHRDTAPDDALSPIPCEVIARNETVVPPPAIVHAPSDAATA
                     ESEPHVAVNAETEPHDAGNAES"
     gene            1523..2350
                     /locus_tag="VLJ38_04690"
     CDS             1523..2350
                     /locus_tag="VLJ38_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38838.1"
                     /translation="MKPPFGQRLPATFGTRWGRACGWVAVLTALVPASAEAAKLRGRI
                     DGFRNLLNPVWAEARDPKQHGYSFREPVATVRAEFRRLFPHAPKEICIAALAPAPQKA
                     PPPVLVRVGGGRTTPVTIVVPPGTRLTFQNTDPFKHRLHGVGIPTFQPADTVRGATRE
                     WSVPGAGVFEIRDDLAPSLRMWVVGDVNVAAIAYPSLKGDFALSVEEPGEYTVQAFFA
                     GKKIGPALPVTVKDADLDLSKTPLKLADEKAAVAADKAEVEKAKIEADSEAKPGGEK"
     gene            2350..4026
                     /locus_tag="VLJ38_04695"
     CDS             2350..4026
                     /locus_tag="VLJ38_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MXAN_5187 family protein"
                     /protein_id="HSU38839.1"
                     /translation="MVLSRFWYVLLGLLFGAALFLLHIASSMYNRAGLRARAEGLSSD
                     AQVVSWYLRDDARQRSAQLIPFALEPDVAKYLQKSNESEAKVPEDARGKLTQALQRVS
                     AQIPKDAGFDSVFAVDQNGRVVAYVGYEQASGMEDFELGGYPVVADALHGYVRDDTLV
                     LDRMYRVVARPVEFDLAAMPAGAIVGARVIDDRFARELSQRTGAAVAFYANGQRAAAA
                     SPAEFNTANLDAIVGDLTDLEQDKDYREKGRSAVREIGGMIAVQYTRLPGEAWQLGAG
                     YAVARLPAAVSGPLAFFSKADDKDKKAGNLPLAIAAAVLAAGLGILFSFLEHTRPLQV
                     FKLEAGKFAAGTIEQLTPSHFRGLFRKIASDVNDGVDKQLAKGGGPRRGPADFKQVLG
                     DIPDQPVMSAFSLPGDAQDSAASGPGSGAVSVPMSSGTSAQGAGRPLPSPPGSAPRRL
                     PRPPGAAPAAAPAPAPAAHLEASMPEGGLTEWGSGAADESEWQDVFREFVATKKQCGE
                     TVDGFTYEKFAERLRKNRDALVQRHGAKRVKFGVYVKDGKAALKANPIKE"
     gene            4103..5065
                     /gene="trxB"
                     /locus_tag="VLJ38_04700"
     CDS             4103..5065
                     /gene="trxB"
                     /locus_tag="VLJ38_04700"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HSU38840.1"
                     /translation="MSEPRLHNVLIIGSGPAGLTAAIYAARANLKPFCIEGFNSGGLI
                     PGGQLMFTSDVENYPGFAKSVSGQELMGAFRAQAEHQGAELVIGDVQKVDLSARPFKV
                     WVGEDENELHLAKTIVVATGARANYIGLPSEDKLKNKGVSACAVCDGALYRGQDVAVV
                     GGGDTAMEEASYLAGLCGKVTLIHRREDFRASRVMQERVRKNPKIRLLMSHVVDEVLD
                     PAEERVTALRVRDLKSDRVSTLPVGALFVAIGHTPMTDLFKGQLETHPNGYLKIELGS
                     TRTSVPGVFAAGDVADWTYRQAVTAAGTGCMAALDAERFLQAEH"
     gene            5103..6005
                     /locus_tag="VLJ38_04705"
     CDS             5103..6005
                     /locus_tag="VLJ38_04705"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSU38841.1"
                     /translation="MSKVADPDARAELAELARAVRAHVEWLVASGAAGTPRAERSPAH
                     VEQSAPPVVAVPAVAPPKPVIARPAPAELTPPAPAPLLTVPTLVRDEPVPNPAEASAT
                     KPVVLEPAERLRRLDVLAETVRSCTRCALHADRTQTVFARGTGASRLCFVGEGPGADE
                     DAQGFPFVGKAGQLLDRMIEAMGFARDEVYVCNIVKCRPPNNRKPEPEEMAACMPYLR
                     EQLELVTPEVIVALGATALQGLFGTTEGITRLRGRWKLYGGRVPVMPTFHPAFLLRNP
                     AAKREVWEDLQAVLRQMGRQPPKR"
     gene            6043..6471
                     /locus_tag="VLJ38_04710"
     CDS             6043..6471
                     /locus_tag="VLJ38_04710"
                     /inference="COORDINATES: protein motif:HMM:NF021384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2085 domain-containing protein"
                     /protein_id="HSU38842.1"
                     /translation="MKSAFAPVVLVRALLVVIGLAPFVPGIAAHWGPLRGFADALDAW
                     FAWQCERDPARMLGFGAVCARCLGLYVGLGLGALVARPRAAWPRLELALVAAVVLLLA
                     DVGSEALGLRGPSASLRLVTGLVLGYVAGVTVVVRLRSRT"
     gene            complement(6455..>7000)
                     /locus_tag="VLJ38_04715"
     CDS             complement(6455..>7000)
                     /locus_tag="VLJ38_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38843.1"
                     /translation="GARVGFAFGGGPPAGQAKPSSDPAAHTPGSGGYPFLPFHLEFRA
                     QYWFLPLTAKLFRAYGLVGGGLAQVDAKVPIGQYDCEDAGKNPDHPEENTPFPVGGKM
                     VGAVAQCASGVQTYYHPSYHPRVPVDAWSKMGRFFLEFGAGGMLAVGQKMGVTLEAKV
                     IYMMPDSGVVLEPVLGVMYGF"
BASE COUNT         1097 a         2365 c         2406 g         1132 t
ORIGIN      
        1 ggattcggcg ttgccggcgt cgtgcggctc ggtttcggcg ttgacggcga cgtgcggctc
       61 ggactcggct gtcgccgcgt cgctcggcgc gtgcacgatc gcgggcggcg gtaccaccgt
      121 ctcgttccga gcgatgactt cgcaggggat cggcgacagg gcgtcgtcgg gcgccgtgtc
      181 ccggtgcgaa ccgacggcgt gcaccgcact gatttcgtcg taggtcggag cgagctctac
      241 gtcgaagccc gcatcgtgca cggtcgggga ctcatccgcg aaaacagggg ggacgatggg
      301 cgtctcgccg gaggcggacg gcggcgctgg ctcgaacgcc gcgcccttgg gcgccgtcgt
      361 tcgcgtgagc tcgtgcacga gcgctcgcgc catgtcgccc gccaggtgcg gctcgcccgt
      421 cgctgccact cggttaagtt cgtcgagagt tacagccggc ggcgtctcgc tgagctccat
      481 ggtttcggcg ctcgccgcca cctcgggcgc gacgtgcggc ggcgtttccg gccgctcgtc
      541 gtgcagctcc gtgccggctc gtgcctcgac cagcacggaa agcgggattg gcgctccgta
      601 cgccgccagc gctcgattgc tctcgtcgag caacagctgc acgggacgtg tgcgcgccgc
      661 gtcgagccaa aatcggagca cggcgctgtc ttcggcatcg agcgcgccgc cgagggtcgc
      721 cgcaccttcg aggctcgcca ggaacaagca aaggccgcgg acctcgacga gtcgcgcgcg
      781 atacagctga tcgccgagcg agctctcgag atccgtggct gcccccactc ccggcggaca
      841 ggcgccgcga cgttcgagcg cgctctcgat cgcctcctcg aggaccacgg cgagcttgcc
      901 gcggtcggcg ggccggagcg gctcgatcag caccgggagg agcgcggccg actcggcctc
      961 gccgacgaaa ttcgcgagct cggaaagccg gacgaagcgc gggccaaaag tttcggtcgt
     1021 gcccggcgcg gacacgccga ggagcccacc aagggggacg acgctcatgg agcggaacgt
     1081 cgcagacccc ctggctgggg gcccactttt tggatgtaat ccgcgggtgt gatggcggtt
     1141 cttcaagacc agccgccggg tcccgctcgg gcctgtccgc ccggccggcc gcggttgact
     1201 acgaggcggc ctgacttata tgatggtgaa ggttccctct gcagagctcg ggagagcgta
     1261 gtaacgaatc cctgatatca accgaacggg tggcgacgag cggtggagtg ctaggcccgg
     1321 gatagctcac cgggaagccg gaagccgcga ttccaagcct cccacctagc gatgctaggg
     1381 gttcggacta cagagaaagt ctcgcgactc aacgtggtaa ggagccctct taacgggccg
     1441 tcggtttcgc ggcggctcgt tggagttttg tgggcctact cgcccttccg tcgctcgctc
     1501 cagtcgggta ctttcgcccg ccatgaaacc tcccttcggc cagcgcttgc cggccacctt
     1561 tggaacgcgc tggggacgcg cgtgcgggtg ggtcgccgtc ctgacggcgc ttgtcccggc
     1621 ctcggcggag gcggccaagt tacgcggccg catcgacggc ttccgaaacc ttctcaatcc
     1681 ggtatgggcg gaagctcggg atcctaagca gcacggctac tcgttccgcg agccggtcgc
     1741 gacggtgcgg gccgagttcc ggcggctgtt tccgcacgct cccaaggaga tctgtatcgc
     1801 tgcgctcgcg cccgcgccgc agaaagcgcc cccgcccgtg ctcgtgcgtg tcggcggcgg
     1861 ccgcacgaca cccgtgacca tcgtggtccc tccgggcacg cgactgacct ttcaaaatac
     1921 ggatccgttc aagcaccgct tgcacggcgt cggcatcccg accttccaac ccgcggacac
     1981 cgttcggggc gcgacacgcg agtggagcgt ccctggcgcg ggtgtcttcg agatccgcga
     2041 cgacctcgcg ccgagcctca gaatgtgggt ggtgggcgac gtgaacgtcg ctgccatcgc
     2101 ttatccatcg ctgaagggcg acttcgcgct ctcggtcgaa gagccgggtg agtacaccgt
     2161 gcaggcgttc ttcgcaggca agaagatcgg gcccgcgctc cccgtcacgg tcaaggacgc
     2221 ggatctcgac ttgtcgaaga cgccgctcaa gctcgccgat gagaaggctg ccgtggcggc
     2281 ggacaaagcc gaggtagaga aggcgaagat cgaggccgac agcgaagcga agccgggagg
     2341 agaaaagtaa tggtcctctc ccgcttctgg tacgtgctgc tcgggctctt gttcggcgcg
     2401 gcgctgttcc tgctgcacat cgcgtcgagc atgtataacc gcgcgggtct gcgcgcgcgg
     2461 gccgagggct tgtcatccga tgctcaggtc gtgtcctggt acctgcgcga cgacgcgcgc
     2521 cagcgttcgg cccagctcat cccgttcgcg ctcgagccgg acgtcgccaa atacttgcag
     2581 aaatccaacg aatcggaggc gaaggtcccc gaggacgcgc gcggcaagct gacgcaggcg
     2641 ctccagcgcg tcagcgcgca aatcccgaag gacgccggtt tcgattccgt tttcgccgtc
     2701 gaccagaacg gccgcgtcgt cgcgtacgtc ggctacgagc aggcgagcgg tatggaggac
     2761 ttcgagctcg gcggctatcc cgtggtcgcc gacgcgcttc acggctacgt gcgcgacgac
     2821 acgctcgtgc tcgatcgcat gtatcgcgtc gtcgcgcggc ccgtcgagtt cgatctggcg
     2881 gccatgcccg ccggagcgat cgtcggcgcg cgcgtgatcg acgatcgttt cgcgcgcgag
     2941 ctctcgcagc gcacgggcgc ggcggtggct ttctacgcca acgggcagcg cgccgcggcg
     3001 gcgtcgcccg ccgagttcaa cacggcgaat ctcgacgcca tcgtgggcga cctcaccgat
     3061 ctcgagcagg acaaggatta ccgcgagaag ggtcgcagcg ccgtccgcga gatcggcggc
     3121 atgatcgccg ttcagtacac gcgcttgccc ggtgaagctt ggcagctcgg cgccgggtac
     3181 gccgtggccc gactgcccgc cgcagtgtcg gggccgctcg ccttcttcag taaagccgac
     3241 gacaaagaca agaaagccgg gaacctgccg ctcgcgatcg cagcggccgt gctcgcggcg
     3301 ggtctcggca tcctgttcag cttcctcgag cacacgcggc cactgcaggt gttcaagctc
     3361 gaagcgggca agttcgcggc cggcaccatc gagcaactca cgccgagcca ctttcgcggg
     3421 ttgtttcgta agatcgcgtc cgacgtgaac gacggcgtcg acaagcagct cgccaagggc
     3481 ggcggcccgc ggcgtgggcc cgccgacttc aagcaagtgc taggcgacat tccggatcag
     3541 ccggtgatga gcgccttcag cttgccggga gacgcgcaag acagcgccgc ttcggggccc
     3601 gggagcggtg ccgtctccgt gccgatgagc tcggggactt cagcgcaggg ggctgggcga
     3661 ccgctgccga gcccgcccgg aagcgcaccg cggcgcttgc cgcgtccgcc cggcgcagcg
     3721 ccagcggccg cgccggctcc ggcgccggcc gcgcatctcg aagcgagcat gcccgagggt
     3781 ggcttgaccg agtggggctc gggagcggcg gacgaatccg agtggcaaga cgttttccgg
     3841 gaattcgtcg cgacgaagaa gcagtgcggc gagacggtcg acggcttcac gtacgagaag
     3901 ttcgcggagc gcctgcgcaa gaatcgcgac gcgctcgtcc agcgtcacgg cgccaaacgt
     3961 gtgaagttcg gcgtctacgt gaaggacggc aaagctgcct taaaggcaaa tcctatcaaa
     4021 gagtaaggca gagcgtagcg ccgcccgagg gctctgccgc tggcggcatg gcccccgcat
     4081 gactacatct gaaggaacga acatgtccga gcctcgtctg cacaacgtcc tcatcatcgg
     4141 ctccggcccg gcgggtctca cagcggccat ctacgccgca cgcgcgaacc tgaaaccgtt
     4201 ctgcatcgaa ggcttcaact ccgggggcct catccccggt ggccagctca tgttcacctc
     4261 cgacgtcgag aactatccgg gcttcgccaa atcggtgtcg gggcaggagc tcatgggtgc
     4321 ttttcgcgca caggccgagc atcagggcgc cgagctcgtg atcggcgacg tccagaaggt
     4381 cgatctctcc gcgcgaccgt tcaaggtctg ggtgggcgaa gacgaaaacg agctgcacct
     4441 cgccaagacg atcgtcgtcg cgacgggagc gcgcgcgaat tacatcggcc tgccgagcga
     4501 ggacaagctc aagaacaagg gcgtgagcgc ttgcgccgtt tgcgatggcg cgctctatcg
     4561 cggtcaggat gtcgcggtgg tcggcggcgg cgatacggcg atggaagagg cgtcgtacct
     4621 cgccgggctt tgcggcaagg tcaccttgat ccaccgccgc gaggatttcc gcgcgtcacg
     4681 cgtcatgcaa gagcgcgtgc gcaaaaatcc gaagattcgg ttgctcatga gccacgtcgt
     4741 cgacgaggtg ctcgatcccg cggaggagcg agtcacggcg ctgcgcgtcc gcgatctcaa
     4801 gagcgatcgg gtctcgaccc tccccgtggg ggcgctcttc gtcgccattg gacatactcc
     4861 catgaccgac ctcttcaagg gccagctcga gacgcacccg aacggttatt tgaagatcga
     4921 gctcggttcg actcgcacga gcgtgccggg cgtcttcgcc gccggtgacg tagccgactg
     4981 gacctaccgc caagccgtca cggcggccgg cacgggctgc atggccgcgc tcgacgccga
     5041 gcgcttcttg caagccgagc attgaagcct cgcgtggcgg tggttgcgct aggctcgagc
     5101 gcgtgagcaa agtggccgac cccgacgccc gcgccgagct cgcggagctt gcacgcgccg
     5161 tgcgcgcgca cgtcgagtgg ctcgtggcga gcggcgccgc cggtacgccg cgcgcggagc
     5221 gttcgccggc gcatgtcgaa caatcggcgc cgcccgtcgt cgcagtaccg gccgtcgcgc
     5281 caccgaagcc cgtgatagcg aggccggcgc cggcagagct gacgccgccc gctcctgcgc
     5341 cgctcctcac cgtcccgacc ctcgtgcgag acgagcccgt cccgaaccct gccgaagcct
     5401 ctgccacgaa gcccgtcgtg ctcgaacccg ccgaacggct acgccgcctc gacgtgctcg
     5461 cggagacggt acgcagctgc acgcgctgcg ccctgcacgc cgaccgcacg cagaccgtgt
     5521 tcgcgcgcgg gacaggagct tcccggctct gcttcgtcgg tgaaggaccc ggagccgacg
     5581 aagacgcgca aggcttcccg ttcgtgggca aggccggtca attactcgac cgcatgatcg
     5641 aggccatggg ctttgcgcgc gacgaagttt acgtctgcaa catcgtcaaa tgccggccgc
     5701 cgaacaacag gaagcccgag cccgaggaga tggcggcttg catgccgtac ctgcgcgagc
     5761 agctcgagct cgtgacgcct gaagtcatcg tggcgctcgg cgcgacagcc ctgcagggcc
     5821 tcttcggcac gaccgaaggt atcacgcgcc tgcgtggccg ctggaagctc tacggcggtc
     5881 gcgtgcccgt gatgccgacc tttcacccgg cgttcttgct cagaaacccc gccgccaaac
     5941 gtgaggtgtg ggaggacttg caagcggttt tgcggcaaat gggccggcag ccgccgaagc
     6001 gctgatgctg cgtccaggca cggacgctca gcgccccgga cgatgaagtc tgcgttcgct
     6061 ccggtcgtgc tcgtgcgcgc gctcctcgtc gtcatcggcc tcgcgccatt cgtgcctggc
     6121 atcgcggcgc actggggtcc gctccgcggc ttcgcggacg cgctcgacgc ctggtttgcc
     6181 tggcaatgcg agcgggatcc ggcacgcatg ctgggcttcg gcgccgtgtg cgctcgttgt
     6241 ctcgggctgt acgtggggct cgggctcggc gcgctcgtgg cgcgaccgcg cgccgcttgg
     6301 ccgcgcctcg agctcgcgct cgtggccgcg gtcgtcctgt tgctcgccga tgtcggtagc
     6361 gaagcgttgg gcttgcgcgg cccctcggct tcgctccggc tcgtgaccgg tctcgtgctc
     6421 ggctacgtgg cgggcgttac cgtggtcgtc cgactcagaa gccgtacatg acgccgagca
     6481 ccggctcgag cacgacgccg ctgtccggca tcatgtagat gaccttcgcc tcgagcgtga
     6541 cgcccatctt ctgaccgacg gcgagcatgc cgccggcacc gaactcgagg aagaatcgtc
     6601 ccatcttgct ccaggcgtcg acgggaacgc gcgggtgata actcggatgg tagtacgtct
     6661 gcactccgct cgcgcactgt gcaacggcac ctaccatttt gccgccgact gggaacggcg
     6721 tgttctcttc cggatgatcc gggttcttgc cggcgtcctc gcagtcgtac tggccgatgg
     6781 ggactttggc gtccacctgt gccaagccgc cgccgacgag cccgtaggcg cgaaatagct
     6841 tcgccgtgag gggcaagaac cagtactggg cgcggaactc gaggtggaac ggcagaaacg
     6901 gatacccgcc gctgcccggc gtgtgtgccg ccggatccga cgagggtttc gcctgccccg
     6961 cgggcggccc gccgccgaag gcgaagccga cgcgcgcgcc
//
LOCUS       DATIML010000272         2867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4094631, whole genome shotgun sequence.
ACCESSION   DATIML010000272 DATIML010000000
VERSION     DATIML010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4094631"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..851
                     /locus_tag="VLJ38_04720"
     CDS             <1..851
                     /locus_tag="VLJ38_04720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38844.1"
                     /translation="AERLSVEGSRGKHSPPSLEHLDARLAVTPDVTQSLDVVSAEVAP
                     LTLNLPDLGWISGLDDDLPRLAGNGKLELEGRRDGQGRWQGSAEARANSLAFKLKKFD
                     VRGDVRAETHVVSTPDGESFSFSRSRVDLWQAQLGSDGHTTAPSSVSVASDDLVLRPN
                     DDSKRVTGTVTAHADDARALLPLVVDSPVMRRIEGALLGLHTFDAKAAFRVGDVSRVD
                     LLRAQAGIAKARGAVSLTKQGPTGAFLVSTGVANLGVRLSSGETRVDLFVGDDWLDKH
                     LSGRSH"
     gene            979..1371
                     /locus_tag="VLJ38_04725"
     CDS             979..1371
                     /locus_tag="VLJ38_04725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HSU38845.1"
                     /translation="MSEYHEPTEELDDATRDAHRAITSLKEELEAADWYHQRLARCTD
                     AALCKILEHNRNEEFEHAAMLIEWLRRNRPEFHERLAKIAFTDRPLGVELEGPAAGPS
                     ERESKRHEPREASNGRGLGVGSLRGGGA"
     gene            1368..2153
                     /locus_tag="VLJ38_04730"
     CDS             1368..2153
                     /locus_tag="VLJ38_04730"
                     /inference="COORDINATES: protein motif:HMM:NF041155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0140737 - encapsulin nanocompartment
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 encapsulin nanocompartment shell
                     protein"
                     /protein_id="HSU38846.1"
                     /translation="MITGRGRAPIAPEVWSTLEEDVKEALEQHFIGRRVVDFDGPHGL
                     AHAALNLGSLERRDLGQGTIAGLRSVLPLLEVRVPFELSRAALDARERGAPDLDDDAA
                     LAAAQKLAELEDRAIFYGLEPAHIRGQLAASSHPRIPLGGDVAATIDAVAQALLVLDQ
                     ALVKGPYALVLGDAAYRRLASAPEYPPLRQLRELVGGRVLHSRVLRGGIVLSMRGGDY
                     QLTVGQDAAIGYQSHDADKVALYLVQSFTFHVMSPEAIVGLEE"
     gene            2194..2601
                     /locus_tag="VLJ38_04735"
     CDS             2194..2601
                     /locus_tag="VLJ38_04735"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU38847.1"
                     /translation="MADPERDAPDDAAANRRVLIVEDDDDVRDVLGELVASLGHEPLP
                     VASGDEALKRASESPIAAALVDLGLPEVDGYEVARRLRASAWGSNMRLVALTGYSDAE
                     TRRHARAAGFDQFLVKPADPAAIERALGGAAPL"
     gene            complement(2619..>2867)
                     /locus_tag="VLJ38_04740"
     CDS             complement(2619..>2867)
                     /locus_tag="VLJ38_04740"
                     /inference="COORDINATES: protein motif:HMM:NF027219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HSU38848.1"
                     /translation="FELLLEEWSDLTVALNALSRSMGVPDPYPFALSRMVREKLEVVH
                     RIVREARASAAREASRSAPYASGAPPAADGEPATRMAV"
BASE COUNT          447 a          983 c         1001 g          436 t
ORIGIN      
        1 gggccgaacg gctcagcgtc gaagggtcac gagggaagca ctcgccgccg agtctcgagc
       61 acctcgacgc gcgcctggca gtgacgccgg acgtgacgca atcgctcgac gtcgtgtcgg
      121 ccgaggtcgc gccgctcaca ctcaatctgc ccgatctggg ctggatttct gggctcgacg
      181 acgacctgcc gcgcctggcc ggcaacggca agctcgagct cgagggccgc cgggacggcc
      241 agggacgctg gcagggcagc gcggaggcgc gggccaatag tctcgctttc aagctcaaga
      301 aattcgacgt gcgtggcgac gtgcgagccg agacccacgt cgtctcgacc cctgacgggg
      361 agagcttctc gttctcgcgc tcgcgcgtcg atctgtggca ggcacagctc ggttccgacg
      421 gtcacacgac ggccccttct tcggtgagcg tcgcgagcga cgacctcgtg ctccggccga
      481 acgacgactc gaagcgcgtg acgggcacgg tgacggcgca cgccgacgac gcacgcgcgc
      541 tcttgccgct cgtcgtcgat tcacccgtca tgcgccgcat cgagggtgcg ctgctcgggc
      601 tccacacgtt cgacgccaag gcggcgtttc gggtgggaga cgtgagccgt gtcgatctac
      661 tgcgcgcgca ggccggcatc gcgaaggcgc gcggcgccgt ttccctcacg aaacaagggc
      721 ccacgggcgc tttcctggtt tcgaccggtg tcgccaatct cggcgtacgc ttgagctccg
      781 gggagactcg cgtggacctg ttcgtcggcg atgactggct cgacaaacac ctttccgggc
      841 gctcgcattg atgcgggggc gcatcgaatt gccacaggcg accaggccgc ctcgcatcct
      901 tgggagcgcg cggcgcgtgc gacgcgcggt ttcgcggatc attcggcgtg gcacatccgc
      961 tgcatgcggt ccgtcgccat gagcgagtat cacgagccga ccgaggagct cgacgacgcg
     1021 acccgagatg cgcaccgcgc gatcacgagc ctcaaagagg agctcgaagc cgcggattgg
     1081 taccaccagc gcctcgcgcg ctgcaccgat gcggcgttgt gcaagatcct cgagcacaac
     1141 cgcaacgaag agttcgagca tgccgccatg ttgatcgaat ggctgcggcg aaaccgtccg
     1201 gagttccacg agcgcctcgc caagatcgcg ttcacggatc ggccgctcgg cgtcgagctc
     1261 gagggcccgg ccgccggccc gagcgaacgc gagtcgaagc ggcacgaacc gcgcgaggcg
     1321 tcgaatggtc gtgggctcgg cgtggggtcg ttgcgaggag ggggcgcgtg atcacggggc
     1381 ggggacgggc gccgatcgcg ccggaagtgt ggagcacgct cgaagaggac gtgaaggaag
     1441 cgctcgaaca gcatttcatc gggcggcgcg tcgtggattt cgacggcccg cacggactcg
     1501 cgcacgcagc gttgaacttg ggctcgctcg agcggcggga tctcggccag ggcacgatcg
     1561 cagggctccg ttccgtcctg ccgttgctcg aggtgcgcgt gccgttcgag ctttcgcgag
     1621 ccgcactcga cgcacgcgag cgtggcgcgc cggacctcga cgacgacgcc gcgctcgccg
     1681 ccgcacaaaa actcgccgag ctcgaggatc gcgcgatctt ttacggtttg gagccggcgc
     1741 acattcgtgg ccagcttgcg gcctcgtcgc acccgcgcat cccgctcggc ggcgacgtgg
     1801 ctgcgacgat cgacgccgtc gctcaggcgt tattggtcct cgaccaagcg ctcgtcaaag
     1861 gaccttacgc cctcgtgctc ggagacgccg cctaccggcg cctcgcttcg gcccccgagt
     1921 acccgccgct ccgccaattg cgggagctcg tcggtgggcg ggtgctgcac tcccgcgtgc
     1981 tgcgcggcgg gatcgtgctc tccatgcggg gcggcgacta ccagctgacg gtgggtcagg
     2041 acgcggcgat cggctaccaa tcccacgacg ccgacaaggt agcgctctac ctagtccaat
     2101 ccttcacgtt ccacgtgatg tcccccgagg cgatcgtagg gctcgaagag tgagcgtggc
     2161 gtgcgcctgc tgacgaggta gactcgcgcc atcatggctg atcccgagcg cgacgccccg
     2221 gacgacgcag ccgcgaaccg gcgcgtcctc atcgtcgagg acgacgacga cgtgcgcgac
     2281 gtgctcggcg agctcgtcgc gtcgctcggg cacgaaccgc tacccgtcgc aagcggtgac
     2341 gaggcgctga agcgtgcgag cgaatcgccc atcgcggcgg cgctcgtcga cctcggcctg
     2401 cccgaagtcg acggttacga agtcgcgcga cgcctgcgcg cgagcgcctg gggcagtaac
     2461 atgcgcctcg tggcgctgac tggttactcc gacgcggaga cacgcaggca tgcccgcgcc
     2521 gcggggttcg atcaattcct cgtcaaaccg gccgatccgg ccgccatcga gcgcgcgctt
     2581 ggcggcgcgg cgccgctcta gctcccgcgt atcggtgctt agaccgccat gcgcgtagcg
     2641 ggttcgccgt ccgcggccgg tggtgcgccc gaggcgtacg gcgccgagcg ggacgcttca
     2701 cgcgcggcgc tcgcccgcgc ctcgcgcacg atgcggtgca cgacctcgag cttttcgcgc
     2761 accatacgag agagcgcgaa cggataggga tcgggcacgc ccatgctgcg cgagagcgcg
     2821 ttcagcgcca ccgtgaggtc gctccactcc tcgagcaaga gctcgaa
//
LOCUS       DATIML010000273         4857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1497214, whole genome shotgun sequence.
ACCESSION   DATIML010000273 DATIML010000000
VERSION     DATIML010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1497214"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(379..2268)
                     /locus_tag="VLJ38_04745"
     CDS             complement(379..2268)
                     /locus_tag="VLJ38_04745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38849.1"
                     /translation="MNGNLLLRARGFGGLASTLLALGAGACESRLSSDLSGHACDAQN
                     HCLAGWVCDLTTRLCVEKLDASPDPSGGCSGAACGGAGAGGASGECEDDRTSCGGECV
                     DTSREPAHCGGCGARCSAPADGVPVCVGGRCNFVCDEGFAACASRCVNLEQDPENCGD
                     CGIRCPVPSGGRATCAASRCATACDKGETACGDECVVLGEDPAHCGGCDERCALDEVC
                     SNGQCTSSCPAGTTACGRACVDLASSLASCGSCDTPCTAPEHGAAACRDGACELSCTA
                     GFVLCGNTCVRLDSDANHCGACDQGCSAPEHGAAACAAGSCDIACDPGFAACGSRCID
                     TTSDPEHCGGCERACAAGEQCSGGTCTGACPAGTASCGGACVELASDPENCGACGVAC
                     AKPAHGQASCNGACGIQCDPGFSVCGSTCVDAASDAANCGACGRACAAPPNGSSSCRQ
                     GTCALACAAGYTDCGGACVDTHSDRNHCGSCDHACAADAVCNSGGCLTSCAAGSSNCG
                     GSCADIEDDSSNCGKCGHVCSAPAGAAPVCSAGACGFACTGALTACGDRCVDLSTDPT
                     HCGRCDATCDPDATCQGGGCVTSCPGNKTSCAGKCVDTKTDKKNCGACGRTCDKGTCK
                     NGECT"
     gene            complement(2283..3071)
                     /locus_tag="VLJ38_04750"
     CDS             complement(2283..3071)
                     /locus_tag="VLJ38_04750"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38850.1"
                     /translation="MHSSPRLSRSNACARYLIALGLVLSTEPALAGEPPAAAEQAKAR
                     FEAGKVAYRSRRYAEAVQCFLDADALAPRAPLSFDIARAYEQLGDVASAARYYRDYLE
                     RDPNAANAPLVRARIAALETPPPEPPVARGAPLAVTEPLEPRSAAADAREPRPAHPSF
                     APWSWLALGTGGAALVGAGVAELVRRDAEHDARTAPDQIAYADQYDRMRSSQTAARVL
                     LVTGGVLAVTGSALVAIDLGRGRRAETRLACGPGACVGTFGGSF"
     gene            complement(3084..4439)
                     /locus_tag="VLJ38_04755"
     CDS             complement(3084..4439)
                     /locus_tag="VLJ38_04755"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU38851.1"
                     /translation="MPAPSARYKAGELLANKYRLERPLGEGGQGTVWRATNVALDASV
                     AVKLVRGEADGEDTARLLHEARVIARLGHPAVLRVYDVDRTADGDCFIVMELLEGESL
                     RERLERTKRLAPIEVVRLLLPIADALAAAHAHGVVHRDVKPDNIFLCGSSGSVRPKLL
                     DFGTVKVPESDEWRHTTAAGTLVGTPGYLAPEQVLCREDLDQRADVWGLCVTLYEAIT
                     GQPPFDGATLEALLRAVVTDEVTPVEHFVPCDPTLCAIIARGLAKHPDARWSSVEELG
                     SSLARWLVEQGVIDDVSGVLLERRWLGPSSEATVVASAPASTGPAVVAAAAREKGVRS
                     LSFGVAVASSALALFFGSAWALSSSELAHATSRTAVAQPEQRKTSDLPAPEPVTPAEP
                     PSVAAVRVQAGPPAVPRPLATSPGSGSRGVSTRSSGPTRVSRPVAARPTKDVEDLIDP
                     Y"
BASE COUNT          808 a         1745 c         1636 g          668 t
ORIGIN      
        1 acacgcaaac acgaacggaa atagcgccaa aacatacttg agtcgcgtgc tcatggtccc
       61 tttgcgggcg ctgttacgag cacggtcggg tgcttggcca gcccatcacg tccaatcagt
      121 acgatgaagc gcgattgaac ataagggaga attcggacat cgaccttgat tgctcgcatg
      181 aacacctacg ctgtcgggca tggtgcgcag cgagtggtca cggccgagcg agagtcggag
      241 accagcgggt tctgcagcgg atccgcgacg agggccgccg gcgcaccccg tccgcgtagg
      301 ccgaaaggcg ttcctcaatc gcgccggcac gggcccgaag aggctctcgt tacgtccgtc
      361 tcgaataccg cggtcgtctc aggtgcactc gccgttcttg cacgtgccct tgtcgcaagt
      421 tcggccgcac gccccgcaat tcttcttgtc cgtcttcgtg tcgacgcact taccggcaca
      481 gctcgtcttg ttgcccgggc acgacgtgac gcagccgccc ccctgacagg tggcgtcggg
      541 gtcgcacgtg gcgtcgcagc ggccacaatg ggtcggatcg gtgctcaggt cgacgcagcg
      601 atcgccgcag gcggtgagcg cgcccgtgca cgcaaaaccg cacgcaccgg cgctgcagac
      661 gggagcggcg ccggcaggcg cgctgcagac gtggccgcat ttgccgcagt tcgagctgtc
      721 gtcctcgatg tccgcgcagg agcccccgca gttcgagctg ccggcggcgc aactcgtcaa
      781 gcagccgccg ctattgcaaa cggcgtcggc tgcgcaagcg tggtcgcacg agccgcagtg
      841 atttcggtca gaatgcgtgt cgacgcaagc cccgccgcag tccgtgtagc cggccgcgca
      901 agcgagcgcg caagttcctt gccggcaact cgacgagccg ttcgggggcg cggcgcaagc
      961 gcgaccacac gcgccgcaat tggcggcatc ggacgccgca tccacgcacg tgctgccgca
     1021 gacggaaaaa cccggatcgc attggatccc gcacgccccg ttgcagctcg cctgcccgtg
     1081 cgccggtttg gcgcacgcga cgccgcacgc gccacagttt tccggatcac tcgcgagctc
     1141 gacgcaagcg ccgccacagc tcgccgtacc cgcgggacag gcgcccgtgc aagtcccgcc
     1201 ggagcattgc tcgccggccg cgcaggcgcg ctcacagccg ccgcaatgtt cgggatcgga
     1261 cgtcgtgtcg atgcaacgcg agccgcacgc cgcaaagccc ggatcgcagg cgatgtcgca
     1321 gctgcccgcg gcacaggcgg ccgcgccatg ctcgggcgcc gagcagcctt ggtcgcacgc
     1381 gccgcagtgg ttcgcgtcgc tgtcgagacg cacgcaggta ttgccgcaca ggacgaagcc
     1441 cgccgtgcaa ctgagctcgc acgctccgtc ccgacaagcc gccgcgccat gctcgggagc
     1501 cgtacagggc gtgtcgcagc tgccgcagct cgccagcgat gacgcgagat cgacgcaggc
     1561 ccgaccgcaa gccgtggtgc ccgccggaca gctgctcgta cactggccat tcgagcaaac
     1621 ctcgtcgagt gcgcagcgct cgtcgcagcc gccacagtgc gcggggtcct cgccgagcac
     1681 gacgcattcg tccccgcacg ccgtctcgcc cttgtcgcag gcggtggcgc agcgtgaagc
     1741 cgcgcacgtc gcccggccgc cggaaggcac cgggcaacgt atcccgcagt cgccgcagtt
     1801 ttcggggtcc tgctcgagat tcacacaccg tgacgcgcac gccgcaaagc cctcgtcgca
     1861 cacgaagttg cagcggccgc ccacgcacac cggcacgccg tccgcaggcg ccgaacagcg
     1921 agcgccgcag cctccgcaat gcgctggctc ccgtgaggtg tcgacgcact cgcccccgca
     1981 cgaggtccta tcgtcctcac actcgccact tgcgccaccg gcgccggcgc cgccgcacgc
     2041 agcaccgctg cagccgccgc tcggatccgg actcgcgtcg agcttctcga cgcagagccg
     2101 cgtcgtcagg tcacagaccc aacccgcgag gcagtgattt tgcgcgtcac aggcgtgtcc
     2161 cgacagatcg gagctcagcc gactctcgca ggcacccgcg ccgagcgcga gcagcgtcga
     2221 agctagcccc ccaaaaccgc gagctcgcag caacaagttt ccgttcatcg cctactccga
     2281 gctcagaaag agccgccgaa cgtgccgacg cacgcgccgg gtccgcacgc gagtcgcgtc
     2341 tcggcgcgcc ggccgcggcc gagatcgatc gcgacgagcg cgctacccgt gacggcgagg
     2401 acgccgccag tcacgagcaa cacgcgcgcg gcggtttggc tcgagcgcat gcggtcgtac
     2461 tggtcggcgt acgcgatctg atcgggcgcc gtgcgcgcgt cgtgctcggc gtcgcgacgg
     2521 acgagctccg cgacccccgc gcccacgagg gcggcgcctc ccgtgccgag cgccaaccac
     2581 gaccaaggcg cgaacgacgg gtgcgccggc cgcggctcac gcgcgtcggc ggcagcagag
     2641 cgcggctcga gtggctcggt gacggcaagc ggcgcccctc gcgcgaccgg cggctcgggc
     2701 ggcggcgttt cgagcgcggc gatgcgggcg cgcaccaggg gagcattcgc tgcgttcgga
     2761 tcgcgttcga ggtagtcgcg ataatagcga gccgccgacg ccacgtcacc gagttgctcg
     2821 taggcccgcg cgatgtcgaa cgacaacggt gctcgcgggg cgagcgcatc ggcgtcgaga
     2881 aagcactgca ccgcttcggc gtagcgccgg gaacgatacg cgaccttgcc ggcctcgaac
     2941 cgggccttcg cctgctcggc ggcagcgggc ggttcgccgg cgagcgccgg ctccgtgctc
     3001 agcacgagac cgagcgcgat gaggtaccga gcgcaggcgt tggagcgcga gagtcgagga
     3061 gaagaatgca tccgccgctg ccgtcagtaa gggtcgatca agtcttcgac gtctttcgtc
     3121 ggcctggccg caaccggccg cgatactcgg gtcggaccgc tgctccgcgt cgagacgcca
     3181 cgcgagccgg accccggcga ggtggctagc ggccgcggga ccgccggcgg cccggcttgc
     3241 acgcgaaccg cggcgacgga cggaggctcg gccggagtaa ccggctccgg agcgggaagg
     3301 tcgctggtct tacgctgctc gggttgggcc acagccgtcc gcgatgtcgc gtgagcaagc
     3361 tcggagctcg agagcgccca ggccgagccg aagaagagcg ccaaagcgct gctcgcgacg
     3421 gcaaccccga agctcagcga ccgcacgccc ttctcacgcg cggccgcagc cacgacggca
     3481 ggacccgtgc tcgccggcgc gctggcgacg actgtcgcct cggagcttgg gccgagccag
     3541 cggcgctcga gcaacacgcc ggagacatcg tcgatcactc cttgttcgac gagccagcgg
     3601 gcgaggctcg agccgagctc ctcgaccgaa gaccagcgag catcagggtg tttcgcgagg
     3661 ccgcgcgcga tgatcgcgca gagcgtcgga tcgcacggca cgaagtgttc gacgggcgtg
     3721 acctcgtcgg tgacgaccgc gcggagcagg gcttcgagcg tcgcgccgtc gaacggcggc
     3781 tgcccggtga tggcctcgta aagcgtgacg cacagtcccc acacgtcggc gcgctgatcg
     3841 aggtcttcac gacagagcac ctgctcgggc gcgaggtagc caggtgtacc gacgagcgtg
     3901 ccggccgccg tcgtgtgccg ccactcgtcg ctctcgggca ccttcaccgt accgaagtcg
     3961 agcagtttcg gccgcacgga gccgctgctc ccgcacagga aaatgttgtc gggcttcacg
     4021 tcgcgatgca cgacgccgtg agcatgggcg gccgcgagcg cgtcggcgat cggaagtagc
     4081 aggcgcacga cttcgatcgg cgcgagccgc ttcgtgcgct cgagtcgctc gcgcaagctc
     4141 tccccctcga gcagctccat gacgatgaag cagtcgccgt ccgccgtacg atcgacatcg
     4201 tagacgcgta ggaccgcggg atgaccaagg cgagcgatga cgcgcgcttc gtgcagcagg
     4261 cgcgcggtgt cctcgccgtc cgcttcgccg cgcacgagct tcacggcgac gctcgcgtcg
     4321 agcgcgacgt tggtcgcgcg ccaaacggtc ccctgcccgc cctcaccgag cggtcgttcg
     4381 agccgatact tgttcgcgag taactccccc gccttgtaac gcgccgatgg cgcgggcacg
     4441 ccatctacac cagctgccgc gggagcgacc acgccggcaa ggaagcacct aacgtgccac
     4501 gggaccgaag caatgtcggc gctccggcgc gagcacggtc gagcgcctca gagcaccaaa
     4561 atgccacggc cgtagctcga tgcctcgagc ccctgcacgc ctcaagtcga atgaggagct
     4621 tttacaaacg agtcctcggg gccccggaca tcagtcaccg gaaaggctga cgcacggctc
     4681 gaggagcacg gcgctcggcc tgaacctcga gggaccgcgc gccgcacaca gcgcgctcgc
     4741 gcagtcgcat gcaatcgcgg tcgaaggcag tcgacttggt cggccccgcc gcgtgaagcg
     4801 cgcaggtgtc tcaacgcact cgccttgtct tagtcaacta aacaccacgc ttatttc
//
LOCUS       DATIML010000274         3602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3806747, whole genome shotgun sequence.
ACCESSION   DATIML010000274 DATIML010000000
VERSION     DATIML010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3602
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3806747"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VLJ38_04760"
     CDS             complement(<1..380)
                     /locus_tag="VLJ38_04760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38852.1"
                     /translation="MLRLALPCLGLTLVGCLNFGKVDDAKAPGDMLGVYQVTGKLADS
                     SCGDGALGSSEHWSFDVKLSRFENDIYWLNGRETIVGDIASDGRTFSIVSEVETKISE
                     PARGKPGCRVMRHDDAEGKLSDSGA"
     gene            complement(434..595)
                     /locus_tag="VLJ38_04765"
     CDS             complement(434..595)
                     /locus_tag="VLJ38_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38853.1"
                     /translation="MSNRSLWNVRRRHEWLATPLKGKPMKKRKRARVGLEQARARKAE
                     KPAAETAAS"
     gene            751..1797
                     /locus_tag="VLJ38_04770"
     CDS             751..1797
                     /locus_tag="VLJ38_04770"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF002537.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HSU38854.1"
                     /translation="MHVTMIKKELADGSPCKKCLQAEEILRRRGLWEQIDEVIFAKEA
                     DPASPGMKLAATHRVELAPFFLVKEGEREVVYTSVIELMREQLASPMSVAPPRPTNGH
                     AAPQPSDDHPSEHDIAELNQRFATAEPVAVVDWVLSRYGESAAIAFSGAEDVAVIDMA
                     ASTGRRFSVFTLDTGRLHPETYRFIDRVRTHYGVKIELMFPDRVAVEELVRKKGLFSF
                     YDDGHNECCGMRKVEPLHRALGGFRAWLSGQRRDQSPTRTNVELFELDRAHRGVTGPM
                     LKANPLAGTTLDDVWNYLRDRQAPTNELHERGYVSIGCEPCTRASRPGEHERASRWWW
                     EEATKRECGLHTAK"
     gene            complement(1872..2684)
                     /locus_tag="VLJ38_04775"
     CDS             complement(1872..2684)
                     /locus_tag="VLJ38_04775"
                     /inference="COORDINATES: protein motif:HMM:NF024209.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HSU38855.1"
                     /translation="MQKLGLLVSLLPAFALGAVLSACDNPSKSESTPSATASAAATTA
                     PTPTPTPTPSAAPSPPKPKKKLADCPTGPDVTIDNAALEAELRKKLEKPSGAIAKADL
                     KRLKSLNLSQLKDIHELDPCLFTPMTGLKELFLGPGDYDDLSPLAGMTQLESLRASIN
                     QVKDLKPLEKLTKLDRLDLGRTQVSDLKPLEKLTNLTELQLDDTPVEDLTPLAGLTKM
                     ENLSLKHTKVKDASPLKGMKKLKFIYIGGTPLDDDPVTLGPVRGQGTKVNSD"
     gene            2724..>3602
                     /locus_tag="VLJ38_04780"
     CDS             2724..>3602
                     /locus_tag="VLJ38_04780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38856.1"
                     /translation="MPDGTEVKLPLLERLGLAVLRRSPAHAPVAAEDDPIYVLNADER
                     RELRRIERRAVRRAATAGALSGTVSAMAAIWAHRWIGANGVPYSAADGVKFWSVVGAA
                     TLVASIFEIGFIYWDALRSVYAMATAAGLRLATETLPDTQHHVALALARAALELPNPP
                     ERVFGVDPHREATRWLVVLASVLYKAKIAVTTFALKALLRALLGQAAGGALLELATIP
                     VTAVWNGIVCFLVVREARLRAMGPSAAVELVGHAFADGAPSAAVRAALLRSVASAIVR
                     NRDLHPNLHALFHALIE"
BASE COUNT          582 a         1143 c         1223 g          654 t
ORIGIN      
        1 gcgccggaat cgctcaattt accctcggcg tcatcgtgcc gcatcacccg gcagccgggc
       61 ttgccccggg caggctccga gattttggtc tcgacttcgc tcacgatcga gaacgtgcgg
      121 ccatcgctgg cgatatcacc cacgatggtt tctcggccgt tcagccaata gatgtcgttc
      181 tcgaagcgcg agagcttcac gtcgaagctc cagtgctcgc tcgagccgag agcgccgtcg
      241 ccgcagctcg agtcagcgag cttgccggtc acctggtaaa cgccgagcat gtcgccgggc
      301 gccttggcgt cgtcgacttt cccgaaattc aaacagccga cgagcgtgag cccgagacag
      361 gggagcgcaa gacgcagcac gccgttcggc taacaagagc cggccgcaag ggccaaattc
      421 gtcgcaggga cgctcagctc gccgcagttt cagcagcggg cttttcggcc ttgcgggcgc
      481 gggcctgctc gaggccgaca cgggcgcgct tgcgcttttt catgggcttg cccttgaggg
      541 gcgtcgcgag ccattcgtgc cggcggcgga cgttccagag tgagcggttc gacatatcga
      601 gggggccttc cctagcggag aaccacgcca tgtgcaattg catcccgcga aacccgagct
      661 ttccggtctg gaaagcggac tttgcgctaa ggtaaaccgt cttcgccggg attccgcagg
      721 gatcctggag tcctacttcg agcctgtctc atgcacgtga ccatgatcaa aaaggagctc
      781 gccgacggca gcccctgcaa gaaatgcctg caagccgagg agatcctccg ccgccgcggc
      841 ctgtgggaac agatcgacga ggtaattttc gccaaagagg cggatcccgc gtcgcccggg
      901 atgaagcttg cggccacgca ccgcgtcgag ctcgcgccgt ttttcctcgt gaaagagggc
      961 gagcgggagg tcgtgtacac gagtgtgatc gagctcatgc gcgagcagct cgcgagcccg
     1021 atgagcgtgg cgccgccgcg gccgaccaac ggccacgcgg cgccgcaacc gagcgacgat
     1081 cacccgagcg aacacgacat cgccgagttg aaccagcgtt ttgcgacggc cgagcccgtc
     1141 gccgtcgtcg attgggtgct cagccgttac ggcgagagcg ccgcgattgc attcagcggc
     1201 gccgaggacg tggctgtcat cgacatggcc gcgagcacgg gtcggcgctt ttccgtgttc
     1261 actctcgaca cggggcggct gcatccggag acataccgct tcatcgatcg cgtgcgcacg
     1321 cactacggcg tcaagatcga gctcatgttt cccgaccggg tcgcggtcga ggagctcgtg
     1381 cgcaaaaagg ggctcttcag cttttacgac gacgggcaca acgaatgttg cggcatgcgc
     1441 aaggtcgagc cgctccatcg cgcgctcggc ggctttcgcg cttggctcag cgggcagcgc
     1501 cgtgatcaaa gcccgacgcg cacgaacgtc gagctcttcg agctcgatcg cgcccaccgc
     1561 ggcgtcacgg ggccgatgct caaagcgaac ccgctcgccg ggacgacgct cgacgacgtc
     1621 tggaattacc tgcgcgaccg ccaggcgccc acgaacgagc tccacgagcg cggctacgtc
     1681 tcgatcggtt gcgagccgtg cacgcgcgcg tcgcggcccg gcgaacacga gcgcgcgagc
     1741 cgctggtggt gggaagaggc gaccaagcgg gagtgcgggt tgcacaccgc caagtaaacg
     1801 cgctcgcatc gagtacggcg ccgcccgcca cgacgtggaa cggcgccgtt acggcggtcg
     1861 cccctaaaca atcaatccga attcactttg gtgccctgtc cgcgcaccgg gcccaaagtc
     1921 accggatcgt cgtcgagcgg cgtgccgccg atgtagatga acttgagctt cttcataccc
     1981 ttgagcggcg aagcgtcttt caccttcgtg tgcttgaggc tcaagttctc catcttggtc
     2041 aggcccgcga gcggagtcag atcctcgacc ggcgtgtcgt cgagctgaag ctcggtgagg
     2101 ttcgtgagct tctcgagcgg cttcagatcg ctcacctgcg tgcgtccgag atcgagacgg
     2161 tcgagcttgg tgagcttttc gagcggcttc agatctttta cctgattgat cgaagcgcgt
     2221 agcgactcga gctgcgtcat gccggcgagc ggcgagaggt cgtcgtaatc gccgggcccc
     2281 aaaaagagct ccttcaggcc cgtcatcggc gtgaagaggc aaggatcgag ctcgtggatg
     2341 tccttgagct gcgagaggtt cagggatttg agccgcttga gatcggcctt ggcgatcgcg
     2401 ccgctcggct tttcgagctt cttcctgagc tcggcttcga gggcggcgtt gtcgatcgtc
     2461 acgtcgggac cagtcgggca gtccgcgagc ttctttttgg gtttgggtgg actcggcgcc
     2521 gcgctgggag tcggcgttgg ggtcggcgtg ggagccgtcg tcgccgcggc gctcgcggtc
     2581 gccgaagggg tgctttcgga cttcgaggga ttgtcgcaag ccgagagaac ggcgcccaac
     2641 gcgaatgccg gcagcagtga gacgaggagt ccgagcttct gcatggcgcg gcaggctatc
     2701 aggtttcggt atgctgcgtc tcgatgccgg acggcacgga agtcaagctg cctttgctcg
     2761 agcgcctggg tctggcggtg ctccggcgtt cgcccgcgca cgcgccggtc gccgccgaag
     2821 acgatccgat ttacgtgctc aacgccgacg agcgtcgcga gctcaggcgc atcgagcgac
     2881 gcgcggtgcg gcgagctgcg acagcggggg cgctgtcggg gacggtgagc gccatggctg
     2941 caatctgggc gcaccgctgg atcggcgcga atggcgtacc gtattcggcg gccgacggtg
     3001 tgaagttttg gtccgtggtc ggcgcggcga cgctcgtcgc ctccatcttc gaaatcgggt
     3061 tcatctactg ggacgcactg cgatccgtgt acgcgatggc gacagcggcc gggctccggt
     3121 tagccaccga gacgctgccc gatacgcaac accacgtcgc gctcgcgctc gctcgtgcag
     3181 cgctcgaatt gccgaatccg cccgagcgtg tgttcggcgt cgatccgcat cgcgaggcga
     3241 cgcgttggct cgtggtgctc gcgtcggtgc tctacaaagc gaagatcgcc gtcacgacgt
     3301 ttgcgctcaa ggcgctcttg cgcgcgctgc tcggacaagc ggcgggcggc gcgctgctcg
     3361 agctcgcgac gattcccgtg acggcggtgt ggaacggcat cgtgtgcttc ttggtggtgc
     3421 gcgaggcacg cctgcgcgcg atggggccgt cggccgcggt cgagctcgtc gggcacgctt
     3481 ttgccgatgg cgcgccgtcg gcggccgttc gcgctgcgct ccttcgctcg gtcgcgagcg
     3541 cgatcgtccg caatcgggat ttgcatccga atctgcacgc gctctttcac gcgctcatcg
     3601 aa
//
LOCUS       DATIML010000275         2306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_633130, whole genome shotgun sequence.
ACCESSION   DATIML010000275 DATIML010000000
VERSION     DATIML010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633130"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..937
                     /locus_tag="VLJ38_04785"
     CDS             <1..937
                     /locus_tag="VLJ38_04785"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HSU38857.1"
                     /translation="SGGSLMLAHPLTAAEASRAGSFSWDPWGLAAILAASTTYALGLA
                     ALRRAGVRPAAVRGWQIAAYAGGVLTLVVALVSPLDSLSDFRFAAHMSQHELLMVVAA
                     PLMVLGRPFFVYLWALPVAWRKRVAAVLATPSFKVTREFFAAPLLVLTLHAVVRWVWH
                     IPALFEGAMQNDALHAFQHFTFFASAAWLWWTVLHGRFGRAGYGVGLLFVFVTAFHTS
                     LLAALLTVAPEGFYPIYAERGLDTGAELLEDQELAGLLMWVPSAVLLLVSGLALFIAW
                     LGEAERRARRADALRQRHLLEAKEPASPRITEEIA"
     gene            1049..1333
                     /locus_tag="VLJ38_04790"
     CDS             1049..1333
                     /locus_tag="VLJ38_04790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38858.1"
                     /translation="MSKWTAECGARHARHYVGAICLGIALASLGAVGCGHKGADAHDA
                     SNPPPSTDSSTMSTGGTSTNGSGDMSTGGTTTSGTGTGTGTGGTSGSMSQ"
     gene            1489..2166
                     /locus_tag="VLJ38_04795"
     CDS             1489..2166
                     /locus_tag="VLJ38_04795"
                     /inference="COORDINATES: protein motif:HMM:NF016154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YetF domain-containing protein"
                     /protein_id="HSU38859.1"
                     /translation="MGKAIHRILLGNAPFGYLGELLIRVLLVYSLLLVVVRFLGKRMS
                     GQITNVELAVMIVLGGIVAVPLEIADRGMLPGLLLLVTVLALQRGVGALQSRSPAAER
                     TLLGHASTLVRDGVVQLAELEQAAISQQELFSLLRGAKVRQLGEVGRAYLEAFGCLSV
                     WRRREALPGLAVLPNEDDEYASRLVAAPDRTACKYCGWVTTPPAQRCAHCSREHFDAA
                     VTAAQSS"
BASE COUNT          346 a          751 c          766 g          443 t
ORIGIN      
        1 gtctggagga tcgctgatgc tcgcacaccc gctcacggcg gctgaagcga gccgcgccgg
       61 gagcttcagc tgggatcctt ggggactcgc cgcaatcttg gcggcaagca cgacctacgc
      121 gctcggcctc gccgcgctcc ggcgggcggg tgtccgacct gctgcggtac gtggctggca
      181 aatcgccgcc tacgcaggcg gcgtgctcac gctcgtggtc gcgctcgtgt cgccgctcga
      241 ctcgctcagt gacttccgtt ttgcggcgca catgtcgcaa cacgagctgt tgatggtcgt
      301 ggccgcgccg ctcatggtgc tcggacgccc gtttttcgtc tatttgtggg cactgccggt
      361 cgcgtggcgc aagcgcgtgg ctgccgtgct cgccacaccg agcttcaagg tcacgcggga
      421 attcttcgcc gcgccgttgc tcgtgctcac gttgcacgcg gtggtacgct gggtctggca
      481 tatccccgcg ctgttcgaag gcgcgatgca aaacgacgcg ctccacgcgt tccagcattt
      541 tacgttcttc gcgagcgcag cgtggctctg gtggacggtg ttgcacggcc gcttcggtcg
      601 cgcaggctac ggtgtcggac tcctgttcgt gttcgtcacg gctttccaca cgagtctgct
      661 cgccgcactc ctgaccgtcg cacccgaggg cttttatccg atctacgcgg agcgcggact
      721 cgataccggc gccgagctgc tcgaagacca ggagctcgcg ggcctcttga tgtgggtgcc
      781 gagcgccgtc ttgttgctcg tgagcggcct cgcgctgttc atcgcttggc tcggcgaggc
      841 cgaacgccgc gctcgccgcg ccgacgcgct ccgtcagcgt cacctgctcg aagccaagga
      901 gcccgcctcg cctcgcatca cggaggagat cgcgtgaacc tgtgactcgc ttgcacggag
      961 cgtcgccgtc tggcgtgcgg cacggatggt gcctggtctg ctccgttcgt cacgaacgtt
     1021 tgaacggtta tgcaaaggag agatgattat gagcaaatgg acggctgaat gcggagctcg
     1081 ccacgcacgt cactacgtcg gagcaatctg tctcggtatt gcactcgctt ccttgggtgc
     1141 agtcggttgt gggcacaagg gcgccgacgc gcacgacgcc tcgaacccgc cgccctcgac
     1201 cgactcgtcg acgatgagca cgggcggaac gagcacgaac ggcagcggtg acatgagcac
     1261 gggcggcacg accacgagcg gcaccggcac cggcaccggc accggcggca cgagcggcag
     1321 catgagccag tagtagcggc gatggccaat cgaggcggcg ttgggtcggt actgccgaga
     1381 gccaacgccc gcctcgaacg ttgatttggc aatgacgaat tcagtaacac aagcgccccg
     1441 tacggtcaga tgagcccgcc tcagtcacga acgaatcggt gagacgacat gggcaaagcc
     1501 attcaccgaa ttctgctggg caatgcgccc ttcggctatc tcggcgaact tttgatccgc
     1561 gtattgctgg tttactcgct gctcctcgtc gtcgtgcgtt tcctcggtaa acgcatgagc
     1621 ggacagatca ccaacgtcga gctcgccgtt atgatcgtgc tcggcggcat cgtggccgtt
     1681 ccactcgaga ttgccgatcg cggcatgttg ccgggcttgt tgctgctcgt tacggtgctc
     1741 gcgttgcagc gtggcgtggg cgccctccag agccgctctc ccgccgcgga acgcacgctg
     1801 ctcggacacg cgagcacgct cgtgcgagac ggcgtggttc aactcgccga gctcgagcaa
     1861 gcagcgatat cccagcagga gctattttcg ctgctgcgcg gcgccaaggt gcggcagctc
     1921 ggggaggtcg gccgcgccta cctcgaggcc ttcggctgtt tgtccgtgtg gcgcaggcgc
     1981 gaggcgctgc caggacttgc ggtgctgccc aacgaggacg acgagtacgc ctcgcgcttg
     2041 gtggcggcgc ccgatcggac ggcgtgtaaa tattgtggct gggtgacgac cccgcccgcg
     2101 cagcgctgtg ctcattgcag ccgtgagcac ttcgatgctg ccgtgacggc cgcgcagtcg
     2161 agctgaccgt gggcaagcgc ccgatcacgc ccttcgatct gccgcgcatg ctgctcggcg
     2221 gccagccggc gacgttcctg ctcgaggcgg cgctgcggct gctcgtgctc tacgtcacgt
     2281 tgatcatcgc attccgactg atgggt
//
LOCUS       DATIML010000276         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2074208, whole genome shotgun sequence.
ACCESSION   DATIML010000276 DATIML010000000
VERSION     DATIML010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2074208"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VLJ38_04800"
     CDS             complement(<1..617)
                     /locus_tag="VLJ38_04800"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HSU38860.1"
                     /translation="MTDVEVRHCPVCGAPVPARAPRCDYCRAPLASVHCAACFSLNPS
                     DATHCLGCGERLGLEPLEFAALLRCPSCSEACRAFGSGTGKLCECTACAGQFVEHELL
                     AELLERRELFRVVTRAHPPRENPTKKPVRYLPCPVCRTRMNRNNFGGSSGIVVDVCPH
                     HGVWFEPGELPRILEFVQAGGLERARQRSQLEHADHERARRVAAAP"
     gene            complement(619..2265)
                     /locus_tag="VLJ38_04805"
     CDS             complement(619..2265)
                     /locus_tag="VLJ38_04805"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU38861.1"
                     /translation="MPGSSVPPAAEVVPRLQVRDPDAWLRAACFAVVGLAALQILVFS
                     FGRDQGIYAVVGEGILHGKVPYKDLWDFKPPGIFFVYALAQGLFGKSMLAPRLVEVLG
                     LVLLVACSGRLARTFFGTTTVGYVGGALAALIHAELDFWHTGQPETFGGVLTFVGLVL
                     TTSEGKRTLRYWRWLGLGAVFGCAALLKPPLGGGALVCAAYLFKREQLQHNVRGAVLS
                     VTAVAAGVCVPFALTLGWFALRGGLGALYWTMHDFTPGYTALGWEGRRAPEMFYYALQ
                     EAFFKFSAVNTAGVVAAVAITPMHLREREGIFIVLGVIAMHVTGIAMQGKFFPYHYAA
                     TLPLIAFLAGLGLYKLFRRCLAGGPGGVLAFVAFVGACVAMRQAVGDLPQDFWERSAI
                     RMKYLLRIAPYDRRETLDAELATVADVSLIADRAVALELRSRTGGSAPVFVWGFEPVI
                     YWLAGREPASRFIYDVPQRTPWQRQRARHDMMQDLALHPPAAIVVQRNDVFPMVTGDT
                     LDSRRALATFPEFERLLDTRYELATTIEDFDVFVPAHRSD"
BASE COUNT          432 a          819 c          751 g          303 t
ORIGIN      
        1 ggcgccgctg cgacacggcg cgcgcgttcg tggtcggcgt gctcgagctg cgagcgttga
       61 cgcgcccgct cgagtccgcc cgcctgcacg aattcgagaa tacgcggcag ctcgcccggt
      121 tcgaaccaaa cgccgtggtg cggacacaca tcgaccacga tgccgctcga accgccgaag
      181 ttgttgcgat tcatgcgcgt ccggcacacg ggacagggca ggtagcggac cggcttcttg
      241 gttggatttt cacgcggcgg gtgcgcgcgc gtcacgacgc ggaagagctc gcgccgttcg
      301 agcagctccg ccaagagctc gtgctcgacg aactggccgg cgcacgccgt gcattcgcag
      361 agcttgccgg tgccgctgcc gaacgcgcgg catgcctcac tgcagctcgg gcagcggagc
      421 agggccgcga actcgagcgg ctcgagcccg agccgttcgc cgcagccgag gcagtgcgtc
      481 gcgtcggacg gattgagcga gaaacaagcc gcgcagtgca cgctcgccag cggcgcgcgg
      541 cagtagtcgc agcgcggagc gcgcgcgggg acgggcgcgc cgcacaccgg gcagtggcga
      601 acctcgacgt ccgtcacgtc agtcgctccg gtgcgcgggc acgaacacgt cgaaatcctc
      661 gatcgtcgtc gcgagctcgt aacgagtgtc gagcaggcgc tcgaactcgg ggaacgtcgc
      721 gagcgcgcgg cgcgaatcga gcgtgtcgcc cgtcaccatc gggaacacgt cgtttctttg
      781 cacgacgatc gccgccggcg ggtggagagc gagatcctgc atcatgtcgt ggcgcgcccg
      841 ttggcgttgc cagggcgtgc gttgaggcac atcgtagatg aagcgactcg cgggttcgcg
      901 ccctgcgagc cagtaaatga ccggctcgaa cccccacacg aagaccggcg ccgagccacc
      961 cgtgcgtgac ctgagctcca gcgcgacggc gcgatcggcg atgaggctca cgtccgcgac
     1021 cgtcgcaagc tccgcgtcga gcgtctcgcg ccgatcgtac ggcgcgattc gcaggaggta
     1081 cttcatgcgt atcgcggaac gctcccagaa atcctgcggc aaatccccca cggcttggcg
     1141 catcgccacg cacgccccca cgaacgccac gaacgccagc acgccgcccg gcccgcccgc
     1201 gagacagcgc cgaaacagct tgtatagccc aagtcccgcg agaaacgcga tcagcggcag
     1261 cgtcgccgcg tagtgatacg ggaaaaactt tccctgcatc gcgatccccg tcacgtgcat
     1321 cgcgatcacg ccgagcacga tgaagatccc ttcgcgctcg cggaggtgca tgggcgtgat
     1381 cgccacggcc gcgacgacgc cagccgtgtt caccgccgag aacttgaaga acgcctcttg
     1441 gagcgcgtag taaaacatct cgggcgcgcg acgcccttcc cagccgagcg cggtgtagcc
     1501 gggcgtgaag tcgtgcatcg tccaatacag cgcgccgagc ccgccacgca gcgcaaacca
     1561 gccgagcgtg agcgcgaacg gcacgcacac gcccgcggcg acggcggtca cggacagcac
     1621 cgcgccgcgc acgttgtgct gcagctgctc gcgcttgaac aaatacgctg cgcacacgag
     1681 cgcgcccccg ccgagtggcg gcttcaaaag cgcggcgcag ccgaacacgg cgccaaggcc
     1741 tagccagcgc caataacgga gcgtgcgctt accttcgctc gtcgtgagca cgagccccac
     1801 gaacgtcagc acgccgccga acgtctccgg ctgccccgtg tgccaaaaat cgagctcagc
     1861 atggatcaat gccgcgagcg cgccgccgac gtagccgacc gtcgtcgttc cgaaaaacgt
     1921 gcgcgcgagg cgccccgagc acgcgacgag cagcacgagc ccgagcacct ccacgagccg
     1981 gggcgcgagc atgctcttgc cgaacagccc ctgcgcgagc gcgtacacga aaaagatgcc
     2041 tggcggcttg aaatcccaga gatctttgta cgggaccttg ccatgcaaaa tcccctcgcc
     2101 cacgaccgcg tagatgcctt ggtcgcgacc gaacgagaac accaaaatct gcagcgctgc
     2161 gagccccacg accgcgaagc aggccgcacg cagccacgca tccggatcgc gcacttgcag
     2221 gcgcggcacg acttccgcgg ccggcggcac agacgatccg ggcatacttg gcgcgccccg
     2281 taggattcga acctacgacc ctcgg
//
LOCUS       DATIML010000277         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2652319, whole genome shotgun sequence.
ACCESSION   DATIML010000277 DATIML010000000
VERSION     DATIML010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2652319"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1673)
                     /locus_tag="VLJ38_04810"
     CDS             complement(<1..1673)
                     /locus_tag="VLJ38_04810"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU38862.1"
                     /translation="MSAKNAYALRNLPIPHKLAITGALVVGLGLFWSGWLISIVAVNW
                     SLSVMTVVDWGSRLVMLPATWRYGLLALHALSLVLLLKLTLALIRRMPLPRLSRRALY
                     VVGVALGGLDLCLWLLVPVSALARALLGAVVFTLALLLAYFVGAPLRAMWRSRPWQNE
                     PERPVHVVIVGGGFAGLYAALGLDRALGYSARLELTVIDRKNYFLFPPLLPSVSVGAI
                     ETRQVTYPFRRIFEATNVRFKKETVERIDLERRVIVSKVDVDRDAVSGALRIRHAETP
                     FDYLVLSPGSTTQTFGTPGTEHAFFMRELGDAIALRNHVIDCFETAAREPEREIAVKM
                     LRFVVVGAGPTGVEVASELRDLADHVLLPRYPEIDPALVEIVLVDTGTRVLPGWHDAV
                     ADAAEAQLARLGVRVLHAERVAEIGTDWVRFKGGRELLTRTTCWCAGVGASPLLASTG
                     LPLDRAGRVPVGPDCRVTDHERVFVLGDAATCLGHAGKPLPPLGQVAFQQGAQTAANL
                     VRLLCGEPTRAFRYFDFGQLVSVGHQFAAVKLLGLRLTGFFAWFVWRTL"
     gene            1885..>2221
                     /locus_tag="VLJ38_04815"
     CDS             1885..>2221
                     /locus_tag="VLJ38_04815"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSU38863.1"
                     /translation="MQVASLIAAARERAERVLEKVDFIAPGVARVTLGVLFMSTGWGK
                     VHSLPKVTAFFTQLGIPAPSFHAHLVSFVELIGGGLLLVGLCSRLAAVPLMVSMLVAI
                     LTAQRDQVHG"
BASE COUNT          400 a          710 c          790 g          321 t
ORIGIN      
        1 tacagcgtgc gccagacgaa ccaggcaaaa aagccggtca agcgcaggcc gagcagcttc
       61 acggcggcga actggtgccc gacgctcacg agctgcccga agtcgaagta gcggaaggcc
      121 cgcgtcggct caccgcagag gaggcgcacg agattcgcgg cggtttgcgc gccctgttgg
      181 aaagccactt ggccgagcgg gggaagcggc ttgcccgcgt ggccgaggca agtcgcagcg
      241 tcgccgagta cgaacacgcg ctcgtggtcc gttacgcggc aatccgggcc gaccggcacg
      301 cgccccgcgc ggtcgagcgg cagccccgtg ctcgcgagca acggagaggc cccgacgccc
      361 gcgcaccagc acgtcgtgcg ggtcaagagc tcgcggccgc ctttgaagcg aacccaatcc
      421 gttccgattt cggcgacgcg ctcggcgtgc agcacgcgca cgccgaggcg cgcgagctgt
      481 gcttcggccg catcggcgac ggcgtcgtgc cagccgggga gcacgcgcgt tcccgtgtcg
      541 accaggacga tctcgacgag cgccgggtcg atttcggggt agcgcggcag gagcacgtgg
      601 tcagcgagat cgcgcagctc ggacgcgact tcgacgcccg tcgggccggc gccgaccacg
      661 acgaagcgca acattttgac ggcgatttcg cgctcgggct cacgcgcggc cgtctcgaag
      721 cagtcgatga cgtgattgcg cagggcgatg gcgtcgccga gctcacgcat gaaaaacgcg
      781 tgttcggtgc cgggggtgcc gaacgtctgc gtggtggagc cgggcgagag cacgaggtag
      841 tcgaagggtg tctcggcgtg gcgaatgcgc aaggcgccgc tcacggcgtc gcgatcgacg
      901 tccactttgg agacgatgac gcgccgctcg aggtcgatgc gctcgacggt ttctttcttg
      961 aagcgcacat tcgtcgcttc gaagatgcgc cggaacgggt aagtgacctg gcgcgtttcg
     1021 atcgcgccga ccgagacgct cggcaaaagt ggagggaaca agaagtagtt cttgcgatcg
     1081 atgaccgtga gctcgagccg cgcgctgtag ccgagcgcgc gatcgagtcc gagcgccgcg
     1141 tagaggccgg cgaagccgcc gccgacgatc acgacgtgca cgggccgttc gggctcgttc
     1201 tgccatggcc gcgagcgcca catcgctcgg agcggcgcgc cgacgaaata agcgagcaag
     1261 agcgcgagcg tgaacacgac ggcgccgagc agagcgcgcg ccagggcgga gaccggcacg
     1321 agcaaccaca agcacagatc gagtccgccg agagcgaccc cgacgacgta gagcgcgcgg
     1381 cgactcaggc gcggcagcgg catgcggcga atgagcgcga gcgttagctt caagaggagc
     1441 accagagaaa gcgcgtgcaa tgcgagcagc ccgtagcgcc aggtggcagg cagcatgacg
     1501 agacgactgc cccaatcgac gacggtcatc accgagagcg accagttgac ggccacgatc
     1561 gagatcagcc agccggacca aaagagcccg agcccgacca ccagcgcgcc cgtaatcgcg
     1621 agcttgtgcg ggatcgggag gtttctgagc gcgtacgcgt tcttggctga catggcgctt
     1681 tcgtcagtac gcgggggcgc cctgccggtt acgtggcgct cggccgggtg ctagttcgac
     1741 caggaaacgc cggaatttca ggccgagtcg ctggaaacgc ccgaggacga tgaaaccagt
     1801 cgggacttgc cccgtagtgg gtgcgaccgg ctgggaagct cggtcgaaag ctcgccgaaa
     1861 acgagcccag aacaggagtc caccgtgcaa gtagcctctt tgatcgccgc cgcccgtgag
     1921 cgtgccgagc gcgtcctcga gaaagtcgat ttcatcgcgc ccggcgtggc gcgcgtcacg
     1981 ctcggcgtgc tcttcatgag cacgggttgg ggcaaggtgc actcgctccc gaaggtgacc
     2041 gcgtttttca cgcagctcgg cattccggcg ccgagctttc atgcgcacct ggtctcgttc
     2101 gtcgagctca tcggcggtgg gctcttgctc gtcgggctgt gttcgcgcct cgcggccgtc
     2161 ccgctcatgg tctcgatgct cgtcgcgatc ctgacggcgc agcgcgatca ggtgcacggt
     2221 c
//
LOCUS       DATIML010000278         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_633935, whole genome shotgun sequence.
ACCESSION   DATIML010000278 DATIML010000000
VERSION     DATIML010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633935"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="VLJ38_04820"
     CDS             complement(<1..847)
                     /locus_tag="VLJ38_04820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38864.1"
                     /translation="MARAVGRTWSILTPEYPPDCGGIGDYIELVARRLAELGDDVTVL
                     TRSPPGRTVTPNVTVELLPDDFGSATKRRLQEAWRRLPEDGVVLVQYVPQGFRLRGMN
                     VPFLRWLGAQRERRWLMVHEAVFPLARREPPRRWVLAGVTRLMLRLATRRAERVFISI
                     PAWEQFLEPWSRGGSHPEWLPIPATLGPDPAALVPPSLLASPEEAVRPVPRTVAHFGT
                     YGEFVSAPLKEVLPLLLARGQDIELILLGAGSERFMSELLALVPEAAGRVRATGRIAP
                     ADVALE"
     gene            complement(1176..1403)
                     /gene="rpmB"
                     /locus_tag="VLJ38_04825"
     CDS             complement(1176..1403)
                     /gene="rpmB"
                     /locus_tag="VLJ38_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HSU38865.1"
                     /translation="MARSEITGKRRMHARNVSHSNIKTMRWQNVNVQQRRLWVPELGR
                     HIALKVTTGDLRTIDKIGLVEYAKRHGMKLD"
     gene            complement(1583..>1937)
                     /locus_tag="VLJ38_04830"
     CDS             complement(1583..>1937)
                     /locus_tag="VLJ38_04830"
                     /inference="COORDINATES: protein motif:HMM:NF016873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HSU38866.1"
                     /translation="HSMPSRGRDGHDDAGVERADIVPGTRGRTTTAAPVIALVEELAQ
                     GAGFRLRHDEPYRGGFTTLNNGRPRDGIHAIQIELARRLYMDERTLAQRPAEFSRLRS
                     FCKELVARLGALKLV"
BASE COUNT          314 a          640 c          689 g          294 t
ORIGIN      
        1 gctcgagcgc gacgtccgcc ggcgcgatgc gacccgttgc tcggacgcgt ccggccgcct
       61 cgggcacgag tgcgagcagc tcactcatga atcgctcgga gccggcgccg agcaagatca
      121 actcgatgtc ttggccccgc gccagcagca gtggcaggac ctccttcagc ggcgccgaca
      181 cgaactcacc gtacgtcccg aaatgagcaa cggtgcgtgg cacggggcgg accgcttcct
      241 cgggtgatgc cagcaacgaa ggcgggacga gcgccgccgg gtcgggcccg agcgttgccg
      301 ggatcggcaa ccactccggg tgactgccgc cgcggctcca gggctcgaga aattgctccc
      361 aagccggaat cgaaatgaac acgcgctcgg cccgccgggt tgcaagacgc agcatcaagc
      421 gcgtcacgcc cgcgagcacc caacggcgcg gcggttcgcg gcgcgcaagc gggaacacgg
      481 cctcgtgcac catcagccag cgccgctcgc gctgtgctcc gagccagcgc aaaaacggca
      541 cgttcatgcc gcgcaaccgg aacccctgcg ggacgtattg cacgaggacg actccgtcct
      601 ccggtagtcg ccgccaggcc tcctggagcc gccgcttcgt ggccgagccg aagtcgtcgg
      661 gcaagagctc gaccgtgacg ttcggcgtga cggtgcgccc gggcggtgaa cgcgtcagca
      721 ccgtcacgtc gtcgccgagt tccgcgagcc gtcgcgcgac gagctcgatg tagtcgccga
      781 tgccgccgca gtccggcgga tactcgggcg tcaggatcga ccaggtgcgg cccacggcgc
      841 gagccatacc gcgttcgggc cgcgcgctgc gagcgagaac gacgactcca cggacacgga
      901 acgagtcaga aagcgcgcga agttgcgagt caacgcgttt cggtccgcga cgcgatcgac
      961 cgggcaccga gctctacatt gcaggatacg cttgtcccct ggagtcacat cccggctatc
     1021 aggtggccac gggcctggac gagctcggga ccagattggc cgaactcatt cccgaatagt
     1081 cgagcgcgcg cagcgcagcg cccaatgctt ggcaacggcg cgtcggcctg caccgatgcg
     1141 ttcagcgttg cggccgccgt cggacgaacg gtcgctcagt cgagcttcat gccgtggcgc
     1201 ttcgcgtact cgacgaggcc gatcttgtcg atcgtgcgaa ggtcgcccgt cgtcactttg
     1261 agcgcgatgt ggcggccgag ctccggtacc cagagccggc gctgctgaac gttgacgttc
     1321 tgccaacgca tcgtcttgat gttggagtgg gaaacgttgc gcgcgtgcat gcggcgcttg
     1381 ccggtgatct cgctacgggc catgacgggg cgcggaccct agcgcaggat tctgggctct
     1441 tcaaccgctc cgatgcattc gttcagcttt attggcgctt cgggcgatcc gaggaggagc
     1501 gtccggccgg ccaagtggcc aaagtcttgc ggtggaacgg cgtgaaacgg cgccgttcgt
     1561 gcgccgaggg cctgggcccg cctcaaacca atttcaaagc gccgagacgc gcgacgagct
     1621 ctttgcagaa ggagcgcagg cgcgaaaatt cggcggggcg ctgcgcgagg gtgcgctcgt
     1681 ccatgtacag gcggcgggcg agctcgattt ggatggcgtg gatgccgtcg cgcgggcggc
     1741 cgttgttcag ggtggtgaag ccgccacggt agggctcgtc gtggcggagc cggaagcccg
     1801 cgccctgagc gagctcctcc acgagcgcga tgacgggagc ggcggtcgtg gtgcggccgc
     1861 gtgtgccggg gacgatgtcg gcgcgttcca cgccggcgtc gtcgtggccg tcgcgaccgc
     1921 ggctcggcat ggagtgc
//
LOCUS       DATIML010000279         4591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1498147, whole genome shotgun sequence.
ACCESSION   DATIML010000279 DATIML010000000
VERSION     DATIML010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4591
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498147"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1066)
                     /locus_tag="VLJ38_04835"
     CDS             complement(<1..1066)
                     /locus_tag="VLJ38_04835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38867.1"
                     /translation="MLRRTTLRDDWQLACPGWLVPPARFGYSRLEWLDASVPGSVHTD
                     LMAAGIIPDPFARRFELGCQWVDAERWVYKTHFTFTPDAALPHRVLRFDGLDTIASVF
                     LDGEKLGEHDNMFVPFELDVSQRLTPGVHELRVELEPAVAVGRERRARYLASEGLQSN
                     VVRFDEQAFVRKAQYMFGWDWGPRLVSAGIWRPVTLVEHAGRLGDVLVEQMHRADGAV
                     ELRFWSETDGAGEVVHEVAGVPGVFSDGDIARIERPELWWPAGFGAQPLLAVTTRLLA
                     PGGVLLDERTTRLGLRRVRLVREPDRHGESFELEVNGRRVYCLGANWIPDDSFPARVT
                     PERVRTQLLRARDLNVNMLRV"
     gene            complement(1139..2827)
                     /locus_tag="VLJ38_04840"
     CDS             complement(1139..2827)
                     /locus_tag="VLJ38_04840"
                     /inference="COORDINATES: protein motif:HMM:NF039312.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DAHL domain-containing protein"
                     /protein_id="HSU38868.1"
                     /translation="MSSARWFALIAALFALACAVSGALYFASRSADFGGHAQAVAAIG
                     EVRHLDRLLSEQVLAARFGLSNQYDPLTATELELVRAEGELHGRVGAVAATPDVERAL
                     GALDHALAERRSALEHFKAENSVLKNSLRYLPTAGEEVARELAENGEGARARDINVLV
                     RAALVYNLIGDQSTREAHIAAIERVRAERAELSGGPASDVDLLLAHARVIGERLPSVD
                     GWLKRAANEELSDRLASLENLYQTRFSASATRANRYRQVLYAWSLLLVVAVALAGLEL
                     KKLYAGLERRVAERTAELERAMDALWGEMKLARRIQEALVPREPKLLGCDVAASMKPA
                     AQVGGDYYDVIHTKTHEWILIGDVSGHGVPAGLVMMMCQTAVRTALERDPELMPDRLL
                     VLVNAVLTENIRQLGEDKYMTITALRRDASGSIWFAGAHQDLFVYRADGDRVETYETA
                     GIWLGLRPDAEGAFNLRELKLGARDLLVLHTDGVTEAMRDGALFDTTGMRRILAGAKD
                     KTAGGVLDDLLAALDGFELNDDATLVVIRQLEAAPKSARPSAAPPPATPRPSAP"
     gene            complement(2839..3849)
                     /locus_tag="VLJ38_04845"
     CDS             complement(2839..3849)
                     /locus_tag="VLJ38_04845"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HSU38869.1"
                     /translation="MSFWRLGVLLLACALAACSEPKASEPRGERRSLDPPKAASREPL
                     EPLPDVPPLDPKIVALGRRLFHERRLSADGSVACSSCHDLERGGVDGQVRSSGVGGKR
                     GAVNAPSVYNAALNFVQFWDGRAATLEEQIGFPVTNPAEMGTSFARVLAFLQADPDYA
                     AAFKAAFPSGVTDANARRAIADFERTLLTRGSPFDRFLAGDEHALALDARAGYETFKS
                     VGCIACHQGRNVGGNMFQRFGVLGDYFKDRGSVTEADYGRFNVTHNEADRFVFRVPSL
                     RNVARTAPYFHDGSAATLTQAVQVMARYQLGRKLSDEQVTSIIAFLQSLSGTLAPAGE
                     KG"
     gene            complement(3846..4337)
                     /locus_tag="VLJ38_04850"
     CDS             complement(3846..4337)
                     /locus_tag="VLJ38_04850"
                     /inference="COORDINATES: protein motif:HMM:NF039711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6272 family protein"
                     /protein_id="HSU38870.1"
                     /translation="MTRAAQAERTLKLARQSTALEDAQRFAEHALSYCTPECREAVTL
                     AVCELGENLLKYAGGDELEAGTIGVSVEDDTVRVRATNRVSSEADARRVRELVSRIES
                     SGGAVRELYRARLQELFEHPELPRAELGLLRMAFEGGFHLTCSYERCELQIVAERTCA
                     GAP"
     gene            complement(4334..>4591)
                     /locus_tag="VLJ38_04855"
     CDS             complement(4334..>4591)
                     /locus_tag="VLJ38_04855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38871.1"
                     /translation="PIFVAAKTPAFAVDVQALRFVNSTAIRAFVDWISRAAHAGYTLA
                     FKTSASVTWHRLSFSVLKSLAPSTVEILETRTTSAGGGPAT"
BASE COUNT          704 a         1521 c         1656 g          710 t
ORIGIN      
        1 aaacgcgcag catgttgacg ttgaggtcgc gcgcgcggag gagctgcgtg cgcacgcgct
       61 cgggcgtgac gcgcgccgga aaggagtcgt ccgggatcca gttggcgccg aggcaataga
      121 cgcggcggcc gttcacttcg agctcgaagg attcaccgtg ccgatcgggt tcgcgcacga
      181 gccgcacgcg gcgcaggccg agacgggtcg tgcgttcgtc gaggaggacg ccgcccggcg
      241 cgagcaggcg cgtcgtcacg gcgagcagcg gctgggcgcc gaaccctgcc ggccaccaga
      301 gctcgggtcg ttcgatgcgt gctatgtcgc cgtcgctgaa gacgccaggc acgcccgcga
      361 cctcgtgcac gacttcgccc gcgccgtccg tctcggacca aaatcggagc tccacggcgc
      421 cgtccgctcg gtgcatctgc tcgacgagca cgtcgccgag gcgtcccgcg tgctcgacga
      481 gcgtcacggg ccgccaaatc ccggctgaaa cgaggcgcgg cccccaatcc cagccgaaca
      541 tgtactgcgc cttgcgcacg aacgcttgtt cgtcgaagcg cacgacgttg ctctgtaggc
      601 cttcgctcgc gaggtagcgc gcgcgccgtt cgcggccgac ggcgacggcc ggctcgagct
      661 cgacgcggag ctcgtggacg cccggcgtga gccgctgact cacgtcgagc tcgaacggga
      721 cgaacatatt gtcgtgctcg ccgagcttct cgccgtcgag aaagacgctc gcgatcgtgt
      781 cgaggccgtc gaagcgcagg acgcggtgcg ggagcgcggc gtccggcgtg aacgtgaagt
      841 gcgtcttgta aacccagcgt tcggcgtcga cccactggca gccgagctcg aaacgccgcg
      901 cgaacgggtc gggaatgatg cccgccgcca tcagatcggt gtgcaccgag cccggcaccg
      961 aggcatcgag ccactcgagc ctggaatagc cgaaccgtgc gggagggacg agccaccccg
     1021 ggcaggcgag ttgccagtcg tctcgaagcg tggtgcgacg gagcacactc acacggtagc
     1081 ggtttagctc gcggcgcggg actgggatct gtcgggcggc cgccggccgg cacggcgatc
     1141 agggagcgct ggggcggggt gtcgcaggag ggggcgccgc gctcggacgc gcgctcttcg
     1201 gcgccgcttc gagttggcgg atgacgacga gggtggcatc gtcgttcagt tcgaagccgt
     1261 cgagggcagc gaggaggtcg tcgagcactc cgcccgcggt tttgtccttc gcgcccgcga
     1321 ggatgcggcg catgcccgtg gtgtcgaaca gggcgccgtc gcgcatggcc tcggtgacgc
     1381 cgtcggtgtg caagacgagc aggtcacggg cgccgagctt gagctcgcgc agattgaagg
     1441 cgccctcggc gtccggccgc agaccgagcc agatcccggc ggtttcgtag gtctcgacgc
     1501 ggtctccgtc cgcgcgatag acgaagaggt cctggtgcgc ccctgcaaac cagatgctgc
     1561 cgctcgcgtc gcggcgcagg gccgtgatgg tcatgtactt gtcctcgccg agctgccgga
     1621 tgttttcggt gagcacggcg ttgacgagca cgagcaggcg gtcgggcatg agctcgggat
     1681 cgcgctcgag tgcggtgcgc acggccgtct ggcacatcat catcacgagc ccggcgggca
     1741 cgccatggcc ggaaacgtcg ccgattagga tccactcgtg cgtcttggtg tggatcacgt
     1801 cgtagtagtc gccgccgact tgcgcggccg gtttcatgct ggccgcgacg tcgcagccga
     1861 gcaatttcgg ttcgcgtggg acgagcgctt cttggatccg ccgcgcaagc ttcatttctc
     1921 cccagagcgc gtccatggcg cgctcgagct ccgcggtgcg ctcggccaca cgccgctcga
     1981 ggccggcgta gagcttcttg agctcgagac cagcgagcgc gacggcgacg acgagcagga
     2041 gcgaccaggc gtagagcacc tgccggtagc gattcgcgcg cgtggcgcta gcgctgaagc
     2101 gcgtttgata caggttttcg agtgacgcca agcgatcgct cagctcttcg ttcgcggcgc
     2161 gcttgagcca gccgtcgacc gacggcagcc gttcgccgat cacgcgcgcg tgagcgagca
     2221 agaggtcgac gtcggaggcc gggccgcccg agagctcagc gcgttcggct cggacgcgtt
     2281 cgatggcggc gatgtgcgct tcgcgcgtgc tctggtcgcc gatgaggtta tagacgagcg
     2341 cggcgcgcac gagcacgttg atgtcgcgcg cgcgcgcgcc ttcgccgttt tcagcgagct
     2401 cgcgggcgac ttcttcgccc gcggtcggca ggtagcgcag cgaatttttg agcacggagt
     2461 tttcggcttt gaaatgctcg agggcgctcc ggcgctcggc gagcgcgtga tcgagcgcgc
     2521 cgagcgctcg ttcgacgtcg ggcgtggccg cgacggcgcc gacgcggccg tgcagctcgc
     2581 cctcggcgcg tacgagctcg agctcggtgg ccgtcagcgg gtcgtactgg ttcgaaaggc
     2641 cgaagcgcgc ggcgagcact tgttcggaca gcaggcgatc caggtgccgc acctcgccga
     2701 tcgcggcgac cgcctgcgcg tgcccgccga agtccgccga gcgcgacgca aagtagagcg
     2761 cgcccgaaac cgcgcacgcg agcgcgaaca gggcggcgat cagcgcgaac cagcgtgcac
     2821 tcgacatact tccccccgtc agcctttctc acccgccggc gcgagcgtcc ccgagagcga
     2881 ctgcaagaag gcgatgatgc tcgtgacctg ctcgtcgctg agctttctgc cgagctggta
     2941 gcgcgccatc acttggacgg cttgtgtcag cgtcgcggcg gagccgtcgt ggaaatacgg
     3001 cgccgtccgc gccacgttcc ggagcgaagg cacgcggaag acgaagcggt cggcttcgtt
     3061 gtgcgtcacg ttgaagcggc cgtagtccgc ttcggtcacg ctgccgcgat ccttgaaata
     3121 gtcgccgagc acgccgaaac gctggaacat gttgccgccg acgttgcgtc cctggtggca
     3181 ggcgatgcag ccgaccgact tgaacgtttc gtagccggcg cgcgcgtcga gcgcgagcgc
     3241 gtgctcgtcg ccggcgagga agcggtcgaa gggtgagccg cgcgtgagca gtgtgcgctc
     3301 gaagtcggcg atcgcgcgcc gggcgttggc gtcggtgaca ccgctcggaa aggccgcctt
     3361 gaaagccgcc gcgtagtcgg ggtccgcctg gaggaaggcg agcacccgcg cgaagctcgt
     3421 gcccatctcg gccgggttcg tcacgggaaa gccgatttgc tcttcgagcg tcgcggcgcg
     3481 gccgtcccag aactgcacga agttgagcgc ggcgttgtac acgctgggcg cgttgacggc
     3541 gccgcgcttg ccgcccactc cggacgagcg gacctggccg tcgacgccgc cgcgttcgag
     3601 atcgtggcaa ctcgaacagg cgacgctgcc gtccgccgag agccgccgtt cgtgaaacaa
     3661 tcgccgcccg agcgcgacga ttttcggatc gagcggggga acgtcgggta gcggttcgag
     3721 cggctcgcgc gacgcggctt tcggcgggtc caagctgcgc cgctctccgc gcggctcgct
     3781 cgccttcggc tcgctgcacg cggcgagcgc gcacgcgagc aaaagcacgc cgagacgcca
     3841 gaagctcatg gcgcgccggc gcaggtccgt tcggcgacga tctggagctc gcagcgttcg
     3901 tagctgcacg tcaggtggaa gccgccctcg aacgccatgc gcaggagacc gagctccgcg
     3961 cggggcagct ccggatgctc gaaaagctcc tgcaggcgcg cccggtagag ctcccgcacg
     4021 gcgccgccgg agctctcgat ccgcgaaacg agctcgcgca cgcgacgcgc atctgcttcc
     4081 gagctcacgc gattggtcgc gcgcacgcgg acggtatcgt cttcgaccga gacgccgatg
     4141 gtgccggctt cgagctcgtc gccgcccgcg tacttgagca aattttcacc gagctcgcag
     4201 acggcgagcg tcaccgcttc gcgacattcg ggcgtgcagt aactaagcgc gtgttcggcg
     4261 aagcgctggg cgtcctcgag cgcggtgctc tggcgtgcaa gcttcagcgt tcgctccgct
     4321 tgcgcggccc gcgtcacgtc gcgggtcctc cgcccgcgga cgtcgtgcgc gtctcgagaa
     4381 tctcgacggt gctcggcgcg agcgacttca agaccgagaa actcaggcgg tgccaggtga
     4441 cgctcgcgct cgtcttgaaa gcgagggtgt agcccgcgtg cgcggcccgc gaaatccaat
     4501 ccacgaacgc acgaatggcc gtggagttca cgaagcgaag ggcctggacg tcgaccgcga
     4561 aggcgggcgt cttcgccgcg acgaagatcg g
//
LOCUS       DATIML010000280         4983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5253784, whole genome shotgun sequence.
ACCESSION   DATIML010000280 DATIML010000000
VERSION     DATIML010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4983
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5253784"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..911)
                     /locus_tag="VLJ38_04860"
     CDS             complement(<1..911)
                     /locus_tag="VLJ38_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38872.1"
                     /translation="MLELDDIQGLVFSGYARQRCARYWFLKLPVVGATGWLSRLLSRV
                     TTSERRERAGDRRVNVALTPSGLEALGLAEEALRTFPQAFLRGMAAPERSSLFGDHGE
                     NAPEHWQFGGTQAGRVDALVLAYAETVDALDELSDALEDDFERFGCTAHVEDAYLTDD
                     LRDHLGFVDAGTNPRIRGGPRKRHKNPYDPSVPAGEFVLGYRNASGHFATSPRAPLRA
                     STRLLPPRTDATRALDLGRNGTFVALRKLALDVPAFWRFAERAGAALWPQGDAHGAVR
                     FAETLVGRRRDGAPLAATHAAARTPLDP"
     gene            complement(911..2167)
                     /locus_tag="VLJ38_04865"
     CDS             complement(911..2167)
                     /locus_tag="VLJ38_04865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38873.1"
                     /translation="MPAPVGKQALTAVFPVLAESSATIGASIEAVSAALCAKLATAES
                     VHAARFVLLDGPGASGQGAATLLLFATIFDGSTQAHLDELWSYGALELEGVLAQCAGW
                     ARPSTRASFGRFVSAHARPVAALFSAHVERTVPQIREDFALRSALSRWLSEHERELRV
                     LAPAEIVRRAGERFDVPREGTATREGTEKRDAAVRQVGASQLALGEWVAFGVTFLRSC
                     IHDVGDLFGGLWHDTLTSSGSVPSLTAGATGTSGSVRTFSHVVEVKAGRFRRRALRLV
                     LRLLDKLSQATSARGKVLGVEAVQSASFMLLEDGRLIFLADFDASVESVLERVAERAP
                     GLVGMIWSQTRGFPISFGWYRGGARDTAKLRDFARQGRLRTPFGYSGYSALGARQIRE
                     NAEIRRLFDGALDDARARRLLSLVRD"
     gene            complement(2180..2596)
                     /locus_tag="VLJ38_04870"
     CDS             complement(2180..2596)
                     /locus_tag="VLJ38_04870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38874.1"
                     /translation="MEARPGSSAALFASLGQLRKSWIKGGWSWDSRYSCVASSFNVEM
                     EAEARAVVIAYLPHEWTSKSIASAPAQAREIAETTGGVRPDQRLYTMDQLGRLVAFGL
                     WWPWGDEITISLRIGLGGYVGEPDLARLKETFGALD"
     gene            2651..3709
                     /locus_tag="VLJ38_04875"
     CDS             2651..3709
                     /locus_tag="VLJ38_04875"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HSU38875.1"
                     /translation="MFATDDVRIEKLRPLLPPAILMEELPLDEDQARQIATARTEIGD
                     ILMGRDDRLAMVVGPCSVHDTKAALDYAARLKRAADRYRSELVVVMRTYFEKPRTTVG
                     WKGLINDPDLDGSFAINRGLRVARQFLRDVVALGLPTATEFLDPITPQFVADLVSWGA
                     IGARTTESQVHRELASGLSMPVGFKNGTSGAVQIAVDAVRSAASPHHFLSVTKQGLAA
                     IVSTRGNPLCHVILRGGSNGPNYSAAHIAEATQSLGKAGLRPVVMVDCSHANSGKDPR
                     RQPEVVADVARRIADGDRSIFGLMIESFLVDGRQDPVEGKPLVYGQSITDGCLGWDGT
                     EPLLAMMSEAVRARRGRT"
     gene            3706..>4983
                     /locus_tag="VLJ38_04880"
     CDS             3706..>4983
                     /locus_tag="VLJ38_04880"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008422 - beta-glucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH1 family beta-glucosidase"
                     /protein_id="HSU38876.1"
                     /translation="MTFPKNFVWGTAAASYQIEGAATDDGKGPSVWDMLCRKPDAVYQ
                     GHTGDVACDHYHRYLEDVAILKRFNIQAYRLSVSWPRVLPTGTGTVNEAGLAFYDRLV
                     DALLEAGITPWVTLFHWDFPLELYYRGGWLNRDSAEWFGDYATLIGRRLGDRVKHWMT
                     LNEPQVYINSGHLEGRHAPGDRLAFHEVVRAGHNTLRAHGRAVQALRAASPGPCRIGY
                     APASHPKVPASDSPADIDAARRAFFATTGRHLATMSWWLEPVFNGKYPEDAWTYFGRD
                     VPQLAPGDMELIAQPVDFFGVNIYAGDRIRATAGGGFETVPFPPGHPRTAFNWPIVPE
                     AMYWTTRFCHERYQRPIVVTENGISSTDSVALDGHVHDPTRIDFTQRYLRELERAIDG
                     GVPIEGYFHWSFIDNFEWAEGYKQRFGLVHCDYA"
BASE COUNT          857 a         1823 c         1548 g          755 t
ORIGIN      
        1 gggtcgagcg gcgttcgcgc tgcggcatgc gtggctgcga gcggcgcacc gtcgcgcctg
       61 cgtccgacga gcgtctccgc gaaacgcacg gcgccgtgag cgtccccttg cggccacagc
      121 gcggccccag ctcgttcggc gaagcgccaa aatgccggca cgtcgagcgc gagcttgcgc
      181 agcgcgacga acgttccgtt acgaccgagg tcgagcgcgc gtgtcgcgtc cgtgcggggg
      241 ggcaagaggc gcgtgctcgc tcggagcggc gcgcgcggac tcgtcgcgaa gtggccgctc
      301 gcgttgcgat agccgagcac gaactcaccc gcgggcacgc tgggatcata cggatttttg
      361 tgccgcttac gcgggccgcc tcgaatgcgt ggattggtgc cggcatccac gaaccccaaa
      421 tgatcgcgca aatcatcggt gaggtaagcg tcctcgacgt gggccgtgca gccgaaccgc
      481 tcgaagtcgt cctcgagcgc gtccgagagc tcgtcgagcg cgtccacggt ctccgcgtac
      541 gcgagcacga gcgcgtccac gcggcctgcc tgcgtgccgc cgaattgcca gtgctcgggc
      601 gcgttctcgc cgtgatcccc gaataggctg gagcgctccg gggcggccat gccgcgcagg
      661 aatgcttgcg ggaacgtccg cagcgcttct tccgccaagc cgagcgcttc gaggccgctc
      721 ggcgtgagcg ccacgttcac gcgccgatcg cccgcgcgtt cgcgccgttc actcgtcgtc
      781 acccgcgaga gcaaccggct gagccacccc gtcgcgccga cgaccggtag cttcaaaaac
      841 caataccgcg cgcagcgctg acgcgcgtag cccgagaaga cgagaccctg gatgtcgtcg
      901 agctcgagca tcagtcccgc acgagcgaga gcagccgccg cgcgcgcgcg tcgtccaaag
      961 ctccgtcgaa gagtcgccga atttccgcgt tttcgcggat ttgacgggcg ccgagcgcgg
     1021 agtagccgct gtacccaaaa ggcgttcgga gccgcccttg gcgcgcgaag tcgcggagct
     1081 tggccgtgtc gcgcgcgccg cctcgatacc agccgaacga gatcggaaac ccacgcgtct
     1141 gcgaccaaat catgccgacg aggcccggcg cccgctccgc cacgcgttcg agcacactct
     1201 cgacgctggc gtcgaagtcg gccaaaaaaa tcaggcgtcc gtcttcgagc aacatgaagc
     1261 tcgccgactg aaccgcttcc acgcccagaa ccttccctcg cgcgctcgtt gcctgcgaca
     1321 acttgtcgag caagcgaagc acgagcctca gcgcgcgacg ccggaaacgg cccgccttca
     1381 cttccaccac gtgggaaaaa gttcgcacac tgccgctcgt tcccgtcgcc cctgccgtga
     1441 ggctcggtac actcccgctc gaggtgagcg tgtcgtgcca gagcccaccg aatagatcgc
     1501 cgacatcgtg aatacacgag cgcaaaaacg tgaccccgaa cgcgacccac tccccgagcg
     1561 ccagctgaga cgctccgacc tgccgcacgg cggcgtcgcg cttctccgtg ccctcgcgcg
     1621 tcgccgtgcc ctcacgcggc acgtcgaagc gctcccccgc ccgccgcacg atctcggccg
     1681 gtgcgagcac gcgcaattcg cgttcgtgct cgctgagcca gcgcgagagc gcgctcctca
     1741 gcgcgaagtc ctcgcgaatt tgcggcaccg tgcgctccac gtgcgccgaa aacagcgccg
     1801 cgaccggccg cgcatgcgcg ctcacgaacc gtccgaagct cgcccgcgtg ctcggccgag
     1861 cccagccggc gcactgagcg agcacccctt cgagctcgag cgccccgtac gaccagagct
     1921 catcgaggtg cgcttgggtg ctgccgtcaa aaatcgtcgc gaagagcagc agcgtcgcgg
     1981 caccctgccc gctcgctccc gggccgtcga gcaacacgaa ccgcgcggca tgaacggact
     2041 cggccgtggc gagttttgcg cagagcgccg ccgacaccgc ttcgatggac gcaccaatcg
     2101 tcgcgctgct ctcggcgagc accggaaaga cagcggtgag cgcttgcttg ccgacgggag
     2161 caggcaccgg tcgcgccgac tagtccagcg cgccgaacgt ctctttcaag cgagcgagat
     2221 ccggctcacc cacgtagcca ccgagaccga tgcggagcga aatcgtgatt tcgtcacccc
     2281 agggccacca gaggccgaac gccacgagcc ggccgagttg gtccatcgtg tagagacgct
     2341 ggtcggggcg aaccccgccg gtcgtctcgg cgatctcgcg cgcttgagcg ggagcgctcg
     2401 caatactctt cgaggtccac tcgtgcggca ggtacgcaat gacgacggcg cgcgcctcgg
     2461 cctccatctc gacgttgaac gacgacgcga cgcacgagta gcggctgtcc cagctccagc
     2521 cacccttgat ccaactcttc ctgagctggc ctagggacgc gaacagtgca gccgacgatc
     2581 cggggcgggc ctccatgggc ggaacgatac ccgaggaagg cgaggctagg ctagagtgca
     2641 agctgccgcc atgttcgcca cggacgacgt cagaatcgag aagctccggc cgctcctgcc
     2701 cccggccata cttatggagg agttgcccct cgacgaggac caggcacgcc agatcgcgac
     2761 cgcgcggacc gagatcggcg atatcctcat gggtcgcgac gaccggctcg ccatggtcgt
     2821 cggcccctgc tcggtgcacg acaccaaagc ggcgctcgat tatgccgccc gtttgaagcg
     2881 ggctgccgac cgctaccgga gcgagctcgt cgtcgtcatg cgcacctact tcgagaaacc
     2941 gcgcaccacc gtcggctgga agggactcat caacgatcct gatctcgacg gcagcttcgc
     3001 catcaaccgc ggcctgcgcg tcgcgcggca atttctgcgc gacgtggtgg cgctcgggct
     3061 cccgaccgcg acggagtttt tggatcccat cacgccgcag ttcgtcgccg atctggtctc
     3121 gtggggcgcc atcggcgcgc gcaccaccga aagccaggtc catcgtgagc tcgcctccgg
     3181 cctctccatg cccgtcggct tcaagaacgg gacgagcggc gccgttcaga tcgccgtcga
     3241 cgccgtgcgt tccgcggcat caccgcatca cttcctctcc gtcaccaagc agggactcgc
     3301 cgccatcgtc agcacgcgtg gcaacccgct ctgccacgtc atcctgcgcg gcggctcgaa
     3361 cggcccgaat tattcggcgg cccacatcgc cgaagccaca caatccctcg gcaaagcggg
     3421 cctgcggccg gtcgtgatgg tcgactgcag ccacgccaac agcggcaagg atccgcggcg
     3481 ccaacccgaa gtcgtcgccg acgtggctcg acgcatcgcc gacggcgacc gctcgatttt
     3541 cggtctcatg atcgagagct ttctggtcga tggccgacaa gatccggtag agggcaagcc
     3601 actcgtctac ggccagagca tcacggatgg atgcttgggc tgggacggca ccgaacctct
     3661 gcttgctatg atgagtgaag ccgtgcgagc acggcgagga cgaacatgac ctttcccaaa
     3721 aatttcgtgt ggggtacggc cgcggcgtcg tatcaaatcg aaggggccgc gaccgacgac
     3781 ggcaagggcc cgagcgtgtg ggacatgctt tgccgcaaac ccgacgccgt ctaccaaggc
     3841 cacacgggcg acgtcgcgtg cgaccactac catcgctacc tcgaagacgt ggcgatcctg
     3901 aagcgcttca acatccaggc gtaccgtctc agcgtctcct ggccgcgtgt gctgccaact
     3961 ggaaccggta ccgtaaacga agcggggctc gccttctacg accgcttggt cgacgccctg
     4021 ctcgaggcgg gcatcacccc gtgggtcacc ctgtttcact gggatttccc gctcgagctc
     4081 tactatcgcg gcggctggct caaccgcgac agcgccgagt ggttcggcga ttacgcgacg
     4141 ctcatcggcc ggcgcctcgg cgatcgcgtc aaacactgga tgacgctcaa cgagccgcag
     4201 gtctacatca actccggcca cctcgaaggt cgtcacgcgc ccggcgaccg gctcgcgttc
     4261 cacgaagtgg tacgcgccgg ccacaacacc ttgcgtgcgc acggccgcgc tgtccaagcg
     4321 ctgcgtgccg cgtcccccgg cccgtgccgc attggctacg ctcccgcgag tcaccccaaa
     4381 gtccccgcga gcgacagccc ggccgacatc gacgctgcgc gccgcgcctt cttcgcgacg
     4441 acgggccgcc acctcgcgac catgtcgtgg tggctcgagc ccgtcttcaa cggcaagtac
     4501 cccgaagacg cgtggaccta cttcggccgc gacgtcccgc agctcgctcc gggcgacatg
     4561 gaactcatcg cccagcccgt cgacttcttc ggcgtcaaca tctacgcggg cgaccgcatt
     4621 cgcgcgacgg ccggcggcgg cttcgagacc gtccccttcc cgcccggcca cccgcgcacc
     4681 gccttcaact ggccgatcgt ccccgaggcc atgtactgga ccacgcgctt ctgccacgag
     4741 cgctaccaaa ggccgatcgt cgtcaccgag aacggcatct cctcgaccga cagcgtcgcc
     4801 ctcgacggcc acgtccacga cccgacgcgc atcgacttca cccagcgcta cctccgcgag
     4861 ctcgagcgcg cgattgacgg cggcgtcccc attgagggct acttccactg gtccttcatc
     4921 gacaacttcg aatgggccga gggctacaaa cagcgcttcg gcctcgtcca ctgcgactac
     4981 gcc
//
LOCUS       DATIML010000281         2031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3520029, whole genome shotgun sequence.
ACCESSION   DATIML010000281 DATIML010000000
VERSION     DATIML010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3520029"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VLJ38_04885"
     CDS             complement(<1..226)
                     /locus_tag="VLJ38_04885"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-guanine transglycosylase"
                     /protein_id="HSU38877.1"
                     /translation="MISFRVHSRSGEARAGVLVTEHGEVPTPAFMPVGTQAVVKGLDA
                     GDLERLGVRMAIMNTYHLWLRPGAEVVRAQG"
     gene            complement(223..1263)
                     /gene="queA"
                     /locus_tag="VLJ38_04890"
     CDS             complement(223..1263)
                     /gene="queA"
                     /locus_tag="VLJ38_04890"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HSU38878.1"
                     /translation="MKTAFLDYALPERSIAVRPLAERDGARLLVLGEAGISHRTVRDF
                     AELVPEGALVVLNDTRVRRARLLLGRAGTGGKVELLLLKPLDRAGASERWQAIGRANK
                     PLREGSELEAPGLRARIVRAGELLEVSLAAEGGVEAWLARSGHVPIPPYLRRTDEALD
                     SERYQTVFAEKLGSVAAPTAGLHLSAGLLERLRARGVSFGRLTLEIGLGTFRPVEADD
                     LDCHAMHSESIDVPPTLCELVAAARSRGAPVVAIGTTVVRALESAADPAEPGHVRPFQ
                     GETRLLIQPGYAFRVVDALFTNFHQPRSTLLALVAAFAGLSRVLEAYAVAVNEGYRFL
                     SYGDAMWLPRRA"
     gene            complement(1260..>2031)
                     /locus_tag="VLJ38_04895"
     CDS             complement(1260..>2031)
                     /locus_tag="VLJ38_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU38879.1"
                     /translation="FVTVNCAAISETLLESELFGHARGAFTGAISARKGLFEEADGGT
                     FFFDEIAETTPAFQAKLLRAIQEGEIRRVGENKPIRVDVRVVAATNVDLAQAVADRRF
                     RQDLYYRLNVVRFVLPPLRERREDIPLLLEFFLTKYTRKMGRRARLGEGVMDRLLAYA
                     FPGNVRELENLVEQAVALCTNGVIGVDDILPEEPRAADRTVGRTLADIVDDAQRQAIE
                     TALRNADGSRERAAELLDISPTTLWRKMTRLGINIESR"
BASE COUNT          329 a          716 c          687 g          299 t
ORIGIN      
        1 cgccctgcgc tctgaccacc tcggcgcccg gacgcagcca caggtggtac gtgttcatga
       61 tcgccatacg cacgccgagc cgctcgaggt cgccggcgtc gaggcctttc accacggcct
      121 gcgtgccgac cggcatgaac gccggcgtgg gtacttcccc atgctcggtc acgagcacgc
      181 ccgcacgcgc ttcgccggac cgcgagtgca cgcgaaagga gatcatgcgc gcctcggcag
      241 ccacatcgcg tcaccgtacg agaggaaacg ataaccttcg ttcaccgcga cggcatacgc
      301 ttcgagcacg cgcgaaagcc ccgcgaacgc cgccacgagc gcgagcagcg tgctcctcgg
      361 ctggtgaaaa ttcgtgaaga gcgcgtcgac gacgcgaaac gcgtagcccg gctgaatcaa
      421 gagccgcgtc tcgccttgga acggccgcac gtgaccgggc tctgcgggat ccgccgcgct
      481 ctcgagcgcg cgcacgacgg tcgtgccgat cgcgaccacg ggcgcgccgc gcgagcgagc
      541 cgccgcgacg agctcacaca aggtaggcgg cacgtcgatg ctttcgctgt gcatggcgtg
      601 gcagtcgaga tcgtcggctt cgacgggccg aaaggtgccg aggccgatct cgagcgtgag
      661 ccgcccgaac gagacgcctc gagcgcgcag gcgctcgagg agcccggccg acaagtggag
      721 ccccgccgtc ggagccgcga cggagccgag cttctccgcg aagaccgtct ggtaacgctc
      781 gctgtcgagc gcttcgtccg tgcgccggag gtagggcggg atcggcacgt gacccgagcg
      841 agcgagccac gcctcgacac caccctcggc ggcgagcgac acttcgagca gctcacccgc
      901 gcgcacgata cgcgcgcgta gtcccggcgc ttcgagctcg ctgccttcgc ggagcggctt
      961 gttcgcgcgg ccgatcgctt gccagcgttc gctggcgccc gcacggtcga gcggcttgag
     1021 caggagcagc tccaccttgc cgccagtacc cgctcgcccg agcaacaggc gcgcgcgccg
     1081 gacgcgcgtg tcgttcaaga cgacgagcgc gccctcgggg acgagctcgg cgaaatcgcg
     1141 caccgtccga tgcgagatgc ccgcctcgcc gagtacgagc aggcgcgctc cgtcgcgctc
     1201 ggccagcgga cgcacggcaa tcgagcgctc cgggagcgcg tagtccagaa atgccgtctt
     1261 caacgcgatt cgatgttgat gccgagtcgc gtcatcttgc gccagagcgt ggtcgggctg
     1321 atgtccagga gctcggccgc gcgttcgcgg ctgccgtcgg cgttgcgcag cgccgtttcg
     1381 atcgcctgcc gctgcgcatc gtcgacgatg tcggcgagcg tgcgcccgac ggtgcgatcg
     1441 gccgcgcgcg gctcctcggg caggatgtcg tccacgccga tgacgccgtt cgtacagagc
     1501 gcgacggctt gctcgacgag attctcgagc tcgcgcacgt tgcctggaaa cgcgtaggcg
     1561 agcaggcgat ccatcacgcc ttcgccgagc cgcgcgcgcc ggcccatctt gcgcgtgtac
     1621 ttcgtcaaga agaactcgag cagcagcggg atgtcctcgc gccgttcgcg gaggggcggc
     1681 aacacgaagc gcacgacgtt cagccggtaa tagagatcct ggcggaagcg ccgatcggcg
     1741 acggcctgcg ccaggtcgac gttcgtcgcg gcgacgacgc gcacgtccac gcgaatcggc
     1801 ttgttttccc cgacgcgccg gatttcacct tcttgaatcg cgcgcaagag cttggcctgg
     1861 aaggccggtg tcgtctcggc gatctcgtcg aagaagaacg tgccgccgtc ggcttcctcg
     1921 aacaggcctt tgcgcgccga gatggcgccc gtgaacgccc cgcgcgcatg accgaacagc
     1981 tcgctctcca gcaacgtctc gctgatggcc gcacagttca cggtcacgaa t
//
LOCUS       DATIML010000282         3494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_921097, whole genome shotgun sequence.
ACCESSION   DATIML010000282 DATIML010000000
VERSION     DATIML010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_921097"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(406..1443)
                     /locus_tag="VLJ38_04900"
     CDS             complement(406..1443)
                     /locus_tag="VLJ38_04900"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU38880.1"
                     /translation="MKKVMHPLAELIKARLREFLREPGYVFWVFGFPLLLAVGLGLAF
                     RERPPEAPRVAVVAEADALRTAALFGDRSLLAERLPRAQAERALARTKVDVLVDVEPS
                     GVVVRFDPAQERSRLARLLVTDALERAAGRRDRVHVRESTVTEHGRRYVDFLVPGLIG
                     LNLMGSSMWGIGFNLVLARKRRLLRRYAVTPMRHYHFLLAYFFSRGIFLALELGLLIG
                     FGKLIFGTTIRGNPLDVVLLGAVGAASFAGISLVVGARLDNTEVANGWMNFVMLPMWI
                     LSGSFFSYERFPAWLRLPIRLLPLTAVNDALRAVYNDGASLLGVGAELAVLAAWGLVG
                     FGVALKTFRWQ"
     gene            complement(1440..2381)
                     /locus_tag="VLJ38_04905"
     CDS             complement(1440..2381)
                     /locus_tag="VLJ38_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38881.1"
                     /translation="MTAPAIRCRKLVKRYADKVAVNGVELELEAGECFGLLGPNGAGK
                     TTTVEMIEGLYRPDAGTIELFGMEWGKGRDREIKERFGVQLQETQLADKLTVAEVLRL
                     FRSFYRKGRSPEELIELLELREERDRYFSRLSGGQKQRVAVGCALVGDPELLFLDEPT
                     TGLDPRARQSLWSIVDRYREQRRSVLITTHYMEEAAALCDRIAVMDQGQIIALGTPRS
                     LVDSLGIVQFVEFDTARPLEEAPLAALASVASVTSRGKRYRLRIDRSLAALGSVLAEL
                     ERQGVQPIGLSTHQATLDDVFLHLTGRGLAPEATEAA"
     gene            2523..>3494
                     /locus_tag="VLJ38_04910"
     CDS             2523..>3494
                     /locus_tag="VLJ38_04910"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSU38882.1"
                     /translation="MPRSVREGDAEPARASARVGQDGIVQAWNAALELLSGRDEASVR
                     GRPLAELVVPLEPHAIPEPAAFAPGMSWSGTVAVPGFDRRPPRVLVAEIRRAEGGDEL
                     CVTLAPLRVPQRTTTIQTSTRSQSCLDEQRLELVLSSMPGFVYTLDRDLVFTSSVGAG
                     LTALNLKPNQLVGMSVLDMWGVRDPSYEPLACHLRCLAGSTTETYQDVCVGRSIEYRL
                     RPLYDLDGNVAGILSTGFDVTEREHAREEQAKLTAQLRQAQKMEAIGRLAGGVAHDFN
                     NLLTCIMGNLTLAGEQIERDSRVARYLGGASAAAESAATLTRQLLAFG"
BASE COUNT          607 a         1162 c         1181 g          544 t
ORIGIN      
        1 tcgattcgga gctgcgattg gccttccttc agctgctgcc agaaggtcga agcctcgtcg
       61 cagttcggca ggatcacacc gagccccgtg atgacgacct cgtgaagtac ggcagttcgc
      121 cgtacggcca aaagttcttg cgaacggtgc gcgtctctat ccgagactac gtgtcgctgg
      181 agggaattgc tatcgttaag gatacgcact agtcggccgc tttcgacgag aactttaggg
      241 ttctcgagct cggcacgcat tttaatgacc ggacatgacc ggacattcgt gagcggacgg
      301 aaatggccgg acatacgtcg cgccgatccg ggtgcgtccg cggcgacttc ggtgcgcgct
      361 cctgcgaacg cgtccacgcc tgtcgcacac cgccctaaat catgactatt gccagcggaa
      421 cgttttgagc gccacgccga agccgacgag accccacgcg gcgagcacgg cgagctcggc
      481 gccgacgccg aggagagacg cgccgtcgtt gtacacggcg cggagggcgt cgttcacggc
      541 ggtgagcggc aagagccgga tcggcaacct gagccaggca ggaaagcgtt cgtacgaaaa
      601 gaacgagccc gagaggatcc acatcggcaa catgacgaag ttcatccagc cgttggcgac
      661 ctccgtgttg tcgagccgcg cgccgacgac gaggctgatg ccggcgaacg acgccgcacc
      721 gaccgcgccg agcagcacta cgtcgagcgg attgccgcgg atggtcgtac cgaagatgag
      781 cttgccgaag ccgatcagta gtccgagctc gagcgccaaa aagataccgc gtgagaagaa
      841 gtaggccagc aagaagtggt agtgccgcat cggcgtgacg gcataccggc gcagcagtcg
      901 gcgcttgcgc gcgagcacga gattgaagcc gatgccccac atgctcgagc ccatgagatt
      961 caagccgatg agtcccggaa cgaggaagtc gacatagcga cggccgtgct cggtgacggt
     1021 gctctcgcgg acgtgcacgc gatcgcggcg gcccgctgcg cgctcgagcg cgtcggtcac
     1081 gagcaagcgc gccaggcgcg agcgctcctg cgccggatcg aagcgcacga cgacgccgct
     1141 cggctcgaca tcgaccagga cgtccacttt cgtgcgcgcg agcgcgcgtt cggcttgggc
     1201 gcgcggcaag cgctcggcca ggagcgagcg atccccgaac agcgcggccg tgcgcagagc
     1261 atccgcttcg gccacgacgg cgacgcgcgg cgcctccggc ggccgctcgc gaaacgcaag
     1321 tccgagtccg acggcgagca gcagcgggaa gccgaagacc caaaacacgt aacccggctc
     1381 gcgcaagaac tcgcgcagcc gcgccttgat gagctcggcg agcgggtgca tgaccttctt
     1441 cacgcggcct ccgtcgcttc gggcgcgagc ccgcgccccg tgaggtggag gaagacgtca
     1501 tcgagcgtcg cctggtgcgt gctgagcccg atcggctgca cgccctggcg ctcgagctct
     1561 gccagcacgg agccgagcgc ggcgaggctg cgatcgatgc gtaggcgata acgcttgccg
     1621 cggctcgtca cgctcgccac gctcgccagc gccgcgagcg gcgcctcctc gagcgggcgc
     1681 gccgtgtcga actcgacgaa ttgtacgatg ccgaggctgt ccaccagcga gcgtggcgtg
     1741 ccgagcgcga tgatctgacc ttgatccatg accgcgatgc ggtcgcagag cgcggcggcc
     1801 tcttccatgt agtgggtcgt gatgagcacg ctgcggcgct gctcgcgata gcggtcgacg
     1861 atcgaccaga gcgactgtcg cgcgcgcggg tcgaggcccg tggtcggctc gtcgagaaac
     1921 aagagctcgg gatcgcccac gagcgcgcag ccgaccgcga cgcgttgctt ctgtccgccc
     1981 gagagtcgcg agaagtagcg gtcccgctcc tcgcgcagct cgaggagctc aatcagctcc
     2041 tcggggctcc tgcccttgcg ataaaaggat cgaaagagcc gcaggacctc ggcgaccgtg
     2101 agcttgtcgg cgagttgcgt ctcttggagc tgcacgccga agcgctcctt gatctcgcga
     2161 tcgcggccct tgccccactc catgccgaag agctcgatcg tgcccgcgtc agggcggtag
     2221 agcccttcga tcatttcgac ggtcgtcgtc ttgccggcgc cgttcgggcc gagcagaccg
     2281 aagcactcgc cggcttcgag ctcgagctcg actccattga cggcgacctt gtctgcgtaa
     2341 cgtttgacga gctttcggca gcgaatcgcg ggtgccgtca cggcgcggac tctagccgaa
     2401 tcccgcagcg cgccgagtgg gcgctaatcc cacgggtaaa tgcgccgttc tccgcgcatg
     2461 actcataaag ctcccaaaga cgttgggttt cggtgtagtt tgtgctggcg atggttgcgt
     2521 ccgtgccccg atcggtccgg gagggggatg ccgagcccgc ccgagcgagc gcgcgcgtgg
     2581 gtcaggacgg gattgtccag gcgtggaacg cggccctcga gctcttgtcg ggcagggacg
     2641 aggcttcggt gcgcggccgc ccgctcgccg agctggtcgt gccgctcgag cctcacgcga
     2701 tccccgaacc cgcggcgttc gcgcccggca tgagctggag cggcaccgtc gcagtgccgg
     2761 gattcgaccg gcgcccgccg cgcgtgctcg tcgcggagat ccgacgcgcc gaaggcggcg
     2821 acgagctctg cgtgacgctc gcaccgctcc gcgtgccgca gcggacgacg acgatccaaa
     2881 cgtcgacgcg cagccaaagc tgcctcgacg agcagcggct cgagctcgtg ctctcgtcga
     2941 tgcccggctt cgtctacacg ctcgatcgcg atctcgtctt cacgtcgtcc gtgggcgcgg
     3001 gacttacggc gctcaatctc aagccgaacc agctcgtggg tatgagcgtg ctcgacatgt
     3061 ggggcgtgcg cgatccgagc tacgagccgc tcgcctgcca tttgcgctgc ctcgccggca
     3121 gcacgaccga gacgtaccaa gacgtatgcg tcggccgctc gatcgagtat cggctgcgac
     3181 cgctttacga tctcgacggc aacgtcgcgg gcatcttgag cacgggcttc gacgtgaccg
     3241 agcgcgagca cgcgcgcgaa gagcaggcca agctcaccgc acaactgcgt caagcgcaga
     3301 agatggaagc catcggtcgc ctcgcgggcg gtgtcgctca cgacttcaac aacctgctca
     3361 cttgcatcat gggcaatctc acgctcgcgg gcgagcaaat cgagcgcgac tcgcgtgtcg
     3421 cgcgctatct cggcggggcg agcgccgccg ccgagagcgc cgccacgctg acacggcagc
     3481 tgctcgcctt cgga
//
LOCUS       DATIML010000283         1687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2943263, whole genome shotgun sequence.
ACCESSION   DATIML010000283 DATIML010000000
VERSION     DATIML010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2943263"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1360
                     /locus_tag="VLJ38_04915"
     CDS             <1..1360
                     /locus_tag="VLJ38_04915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38883.1"
                     /translation="PLALSTACTSANPQAEFPPVAKRWYERGTASYQAGDLEDAELAV
                     ENALRAAPNQPETRLLAGRVSLARLDYDRTIEVLKGLTSADARGLRGRALWYRGDVQS
                     AADELDALLRDPDVKDGWAVEIVKLARRGVGRKPFDMSGGLLAVMDMPRTGSASMIVP
                     VEIDGDPALGMIATGTAEAVVDAAAGTEPSWVSLRFGERVEVRDVPVLAKDLSGLSKQ
                     VNAPIKILIGVNLLRHLHPTIDFAGGQFVVRSFEPPPPPAATTVRLSYVRGGGMLVRG
                     AFGSGESAPACSLLIDTSLTYPVALAGTAWAKAGVPASSMHTLPNSGSLREGVLPSLR
                     LGAFEVPHVPGLEGDGTIKERAEGLGVNVDGLLGAGLLATFRMTLIDGGRSMWLEDLP
                     NEALGPSLPLDVPDVDLPADDSEGADSGDADEDEPPAKGKGGKASKPAAPKGAPPAPK
                     KP"
     gene            1357..>1687
                     /gene="coaD"
                     /locus_tag="VLJ38_04920"
     CDS             1357..>1687
                     /gene="coaD"
                     /locus_tag="VLJ38_04920"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HSU38884.1"
                     /translation="MSEGVELAIYAGSFDPPTYGHLDLVERAARLFPKLIVAVGTNPT
                     RSPLFSVDERLGLLTEICAPFSNVSVASFGGLLVDYGKRVGARVVVRGLRVGSDFEYE
                     LQIAHANA"
BASE COUNT          247 a          590 c          596 g          254 t
ORIGIN      
        1 gccactcgct ctctccaccg cgtgcacctc ggcgaaccca caggccgagt ttccgcccgt
       61 cgctaagcgc tggtacgaac gcggcaccgc gagctaccag gccggcgacc tcgaggacgc
      121 cgagctggcg gtcgagaacg ccttgcgcgc cgcgccgaac cagccggaaa cacggctgct
      181 cgccggtcgt gtttcgctcg cccggctcga ctatgaccgt accatcgaag tcctgaaagg
      241 gctcaccagc gccgacgcgc ggggcctccg cggacgcgcg ctctggtacc gcggcgacgt
      301 gcagagcgcc gctgacgagc tcgacgccct cttacgcgac cccgacgtga aggacggctg
      361 ggccgtcgag atcgtgaaat tggcgcggcg cggcgtgggc cggaaaccct tcgacatgag
      421 cggcggcttg ctcgccgtca tggacatgcc gcgcaccggt tcggcctcca tgatcgttcc
      481 cgtcgaaatc gatggcgacc ccgcgctcgg catgatcgcc acgggcacgg ccgaggccgt
      541 cgtcgacgca gctgcgggca cggagccgtc ctgggtgtcc ctgcgcttcg gcgaacgcgt
      601 cgaggtgcgc gacgtgcccg tgctcgccaa ggatctctcc ggcctttcga agcaggtgaa
      661 cgcgccgatc aagatcctga tcggcgtgaa cttgctccgg catctgcacc cgacgatcga
      721 ctttgcgggc ggccagttcg tggtgcgttc gttcgagccg ccgcccccgc ccgccgcgac
      781 gaccgtgcgc ctgagctacg tgcgcggcgg cggcatgctc gtccgcggcg cgttcggcag
      841 cggggagtcc gcgccggcct gttcgctcct catcgacacg tcactcacct acccggtggc
      901 gctcgcgggt accgcttggg cgaaagctgg ggtgccggcg tccagcatgc acacgctgcc
      961 gaactcgggg tcgctgcgcg agggcgtgct cccgtcgctc cggctcgggg cgttcgaggt
     1021 gccgcacgtg ccggggctcg agggtgacgg caccatcaag gagcgtgcgg aaggccttgg
     1081 cgtcaacgtc gacggcctgc tcggcgcggg cctgctcgcg acgttccgca tgacgctcat
     1141 cgacggcggc cgcagcatgt ggctcgaaga tctgccgaac gaagcgctcg gtccgtcgct
     1201 gccgctcgat gtgccggacg tcgacctgcc ggcggacgac agcgaaggcg ccgacagcgg
     1261 cgacgcggac gaagacgagc cgccggccaa gggcaagggc ggcaaagcca gcaaacccgc
     1321 ggcgcccaag ggcgctccac cggcgcccaa gaagccatga gcgaaggggt cgagctcgcg
     1381 atttacgccg gtagcttcga tccgccgacg tacggtcatc tcgatctggt cgaacgcgcc
     1441 gcgcggctgt ttccgaagct gatcgtggcc gtgggcacga acccgacgcg gtcgccgctc
     1501 ttcagcgtcg acgagcggct cgggctgctc acggagattt gcgcgccgtt cagcaacgtt
     1561 tcggtcgcga gcttcggcgg cctcctggtc gactacggca agcgcgtggg agcgcgcgtc
     1621 gtggtgcgcg ggctgcgcgt gggctcggac ttcgagtacg agctgcagat tgcgcacgcg
     1681 aatgcgg
//
LOCUS       DATIML010000284         4598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5542988, whole genome shotgun sequence.
ACCESSION   DATIML010000284 DATIML010000000
VERSION     DATIML010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4598
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5542988"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1325)
                     /locus_tag="VLJ38_04925"
     CDS             complement(<1..1325)
                     /locus_tag="VLJ38_04925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38885.1"
                     /translation="MLTLLGVLGCGKRERSLNGIGAGGLPTGNTPDACASHQTGCPCT
                     TEAATTACGSVKQKVGDSVICSEGVRTCSGGQWGDCVGTHEVKKPMSFRAPMQGGYTA
                     QALGAGTGCDDLCDPGCQTFDDDANGLGVDVDLTATPDGISLPAGSGGGVCNNISLVP
                     PTSTVTVTAISSGGTITATPNNGKVDFDATCEGGAQVEPSWTIDSYDRAVISAHGIVT
                     VYSGRGGPIQVTGTTSGGSSTATLNVQVLIGDALVAAGTTTEVGKTLYPYRDTVFPLG
                     LKAPVVQWTEGGITPTQTEVILCYPQNTCAGVGTPTFQYAKKYPVSGMPAVTEPRDGP
                     LDFTVPAWQIPQEIWSAFDQTAAGDVGQIIIRRQAGSTKYKELTINVSFAKDALRGTV
                     YYTQYLRTLHTTASGQTFTYTGSTYAPGQTCEVGNSTHPSSTAGSQTRA"
     gene            1602..2528
                     /locus_tag="VLJ38_04930"
     CDS             1602..2528
                     /locus_tag="VLJ38_04930"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HSU38886.1"
                     /translation="MATRQRHLLGIEGLERDTALALLAKAAEYYELGRGAVRKVPVLN
                     GKTIINLFFESSTRTRTSFELAGKRLGADVVNLGGSSSSMSKGESLLDTVATVDAMHA
                     DAIVIRHAASGAPHYVASRIRSPVVNAGDGMHEHPTQALLDAFTIRRRLARDLDGVVV
                     AICGDILHSRVARSNVILLQLLGAEVRLAGPRTLLPHSESALGARCFDRIEPALAGAD
                     AVMMLRIQQERLGAALLPSLREYSREFGLSRARLDLAKPGAIVMHPGPLNRGVEVSDD
                     VADGTTSAILDQVEAGVAVRMAVLQFCAAGSS"
     gene            complement(2589..3875)
                     /locus_tag="VLJ38_04935"
     CDS             complement(2589..3875)
                     /locus_tag="VLJ38_04935"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HSU38887.1"
                     /translation="MTKRERLAALGQWIVLGSLVGVLSGAASALFLWLLERATEFRSG
                     HEVIVYTLPLAGLAVGWFYERFGKAIKAGNNLVIDTIHDQGPEIPLRMAPMVLVGTVL
                     THVFGGSAGREGTAVQMGASIADWVSHRARLGKHARRQLLAAGVAGGFGSVFGTPIAG
                     MVFGLEFIVLGRIEYDALVPALVASVIGDMTTRALGIVHTHYPVASHVPLTLVLLSKW
                     LVFAVVVALVTTAFIELTHFIKRRGEKQIPRLPLRMFLGGLAVVGLWRLAGTSDYLGL
                     GVPVIVRSFHDPNLPIYAFALKLVFTAVTLGVGFLGGEVTPLFFVGATLGNTLARALG
                     IPLELGAGVGLAAVFAASANTPLALSIMAMELLGAPIFPHVAIVCVLAYLLSGHRSIY
                     PAQRLISGKGGARLAQATPLRELAARGSSPRANDEH"
     regulatory      complement(4073..4141)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
     gene            4283..4420
                     /locus_tag="VLJ38_04940"
     CDS             4283..4420
                     /locus_tag="VLJ38_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38888.1"
                     /translation="MALVGPAGARTGAGVDVTACGAMVVALELGSVRAAFMPGGFGAS
                     A"
BASE COUNT          744 a         1527 c         1585 g          742 t
ORIGIN      
        1 atggcgcgcg tctgcgagcc ggcggtggag ctcggatgcg tcgagttacc gacctcgcac
       61 gtctgtcccg gcgcgtatgt cgagccggtg tacgtgaagg tctgtcccga cgccgtcgtg
      121 tggagcgtgc ggaggtactg cgtgtagtag acggtgccgc gtaacgcgtc cttcgcgaag
      181 ctcacgttga tcgtgagctc tttgtatttg gtcgagcccg cttgccggcg aatgatgatt
      241 tggccgacgt cgcccgctgc cgtttgatcg aacgcgctcc agatctcctg cgggatttgc
      301 caagcgggga ccgtgaagtc gaggggccca tcacgcggct ccgtcaccgc tggcatgcca
      361 ctcactgggt acttcttcgc gtactggaac gtcggggttc ccacccccgc gcacgtgttc
      421 tgcgggtagc agaggatcac ctcggtctgc gtcggcgtga tgccaccctc cgtccactgc
      481 acgaccggcg ctttgaggcc gagcggaaaa acggtgtctc tgtacgggta cagcgtcttc
      541 ccgacctcgg tcgtcgtacc tgcggcgacg agcgcgtccc cgatcagcac ctgcacgttg
      601 agcgtcgccg tgctgctgcc gcccgacgtg gtgcccgtca cctgaatggg gccgccacgg
      661 ccggagtaga cggtcacgat gccgtgcgcg ctgatgacgg cgcggtcgta ggagtcgatc
      721 gtccagctcg gctcgacctg ggctccgccc tcgcaggtcg cgtcgaaatc gactttgccg
      781 ttgttcggcg tcgccgtgat cgttccaccg gacgaaatag ccgtgacggt gacggtcgac
      841 gtcggcggca cgaggctgat gttgttgcag acaccgccgc ctgagccggc cggcagcgag
      901 atgccgtcgg gagttgcggt gagatcgacg tcgacgccca agccgttggc gtcgtcgtca
      961 aatgtctgac acccgggatc gcagagatcg tcgcaacccg tgcccgcgcc gagcgcttgc
     1021 gccgtgtagc cgccctgcat cggcgcgcgg aacgacatcg gctttttcac ttcgtgcgtg
     1081 ccgacgcagt caccccattg cccgcccgaa caggttcgca cgccttccga gcagatcacg
     1141 gagtcgccga ccttctgctt gacggagccg cacgccgtcg tcgcggcctc ggtcgtgcag
     1201 gggcaacccg tctggtgcga tgcgcaggcg tccggcgtgt tgcccgtcgg cagaccgccg
     1261 gcaccgatgc cgttcagcga gcgctcgcgc ttgccgcaac cgagcacgcc gagcaacgtg
     1321 agcaagacga tggcgatgta ggcgttaggc catcgaacac gaagcggcgc gcgaagcatc
     1381 aaacccgagc gagattagca agtagcgtgc ccggagctcc agctggaacg ctctttcgtt
     1441 tcgcgagctt atcgtggccc gagcggccgc ttgcgccctg tttcggcgca aagaatgcag
     1501 agtccgcagc ggcttgcgat gtaggtaatt tcccgtggat ctgggggttc gtcgcagaga
     1561 tggttggccg tgacgcgctc ctttggtagg accgctccgc tttggcgacg cgacagcgcc
     1621 acctgctcgg catcgaaggc ctggagcgtg acacggcact cgcgctgctc gcgaaggcgg
     1681 cggagtacta cgagctcggt cgcggcgccg tccgcaaggt gccggtgctg aacggcaaga
     1741 ccatcatcaa cctgttcttc gagtcgtcga cgcgcacgcg cacgagcttc gagctcgccg
     1801 gcaagcgcct cggcgccgac gtcgtgaacc tgggcggctc gagctcgagc atgagcaagg
     1861 gcgaatcgct gctcgacacc gtcgcgacgg tcgacgccat gcacgccgac gccatcgtga
     1921 ttcgtcatgc cgcttccggc gcgccgcact acgtcgcgag ccggatccgc tcgccggtcg
     1981 tcaacgccgg tgacggcatg cacgagcacc cgacgcaagc gctgctcgac gccttcacga
     2041 tccgccgtcg cctcgcgcgc gacctcgacg gcgtggtcgt cgcgatctgc ggcgacatcc
     2101 tgcacagccg cgtcgcgcgc tcgaacgtca tcttgctgca gctgctcgga gcggaggttc
     2161 ggctcgccgg accccgcacg ctcttgcctc actcggagtc cgcgctcggc gctcgttgct
     2221 tcgatcgcat cgagccggcg ctcgcaggcg ccgacgcggt catgatgctg cgcatccagc
     2281 aggagcggct cggcgcggcg ctcttaccgt cgctgcgcga gtactcccgc gaattcggtt
     2341 tgagccgcgc ccgcctcgat ctcgcaaaac ctggcgcgat cgtcatgcac cccggcccgc
     2401 tgaaccgcgg cgttgaagtc tccgacgacg ttgccgacgg cacgacgagc gcgatcctcg
     2461 atcaggtgga ggccggcgtg gccgtgcgca tggccgtgct tcagttctgc gccgccggat
     2521 ccagctgacg gctctgcgcg atagctcgag cttggccgcc ggggcttccg agatcgctca
     2581 actcgaaact agtgctcgtc gttcgctcgc ggcgatgacc ccctcgccgc gagctcgcgc
     2641 aagggcgtcg cttgcgcgag ccgcgcgccg cctttaccgc tgatgagccg ctgggcgggg
     2701 tagatgctgc gatgaccgga gagtagatag gcgagcacgc agacgatggc gacgtggggg
     2761 aagatgggcg cgccgagcag ctccatcgcc atgatcgaca acgcgagcgg agtgttggcc
     2821 gaggccgcga agaccgcagc caagccgacg ccggcgccga gctcgagcgg gatgccgagg
     2881 gcacgagcga gcgtgttccc gagcgtcgcg cccacgaaga acaagggcgt gacttcacct
     2941 ccgagaaacc ccacgccgag tgtcacggcc gtgaagacca gcttcagcgc gaaagcgtaa
     3001 atcggcaggt tgggatcgtg gaaggaacgc acgatcaccg gcacgccgag gcccagatag
     3061 tcgctcgtcc cagcgagccg ccacagtccg acgaccgcga gaccgccgag aaacatgcgc
     3121 agcggcaggc gcgggatctg cttttctccg cgccgtttga tgaaatgcgt cagctcgatg
     3181 aaagccgtag tgacgagcgc cacgaccacc gcgaagacga gccatttcga gagcagcacg
     3241 agcgtcaacg gcacgtgcga ggcgaccggg taatgcgtgt ggacgatgcc gagcgcgcgc
     3301 gtggtcatgt cgccgatcac cgaggcgacg agcgccggca cgagcgcgtc gtattcgatg
     3361 cgcccgagca cgatgaactc gaggccgaag accatccccg cgatcggcgt tccgaacacg
     3421 gacccaaacc ccccggcgac accagctgcg agcaactggc gccgagcgtg cttacccagg
     3481 cgggcgcggt gggacaccca atccgcgatg ctcgctccca tctgcacggc ggtgccttcg
     3541 cgtcccgcgc tgccgccgaa gacgtgcgtg agcaccgtgc cgacgagcac catcggagcc
     3601 atgcgcaacg ggatttccgg tccctggtcg tgaatggtgt cgatgacgag gttattgccg
     3661 gctttgatgg ccttaccgaa acgctcgtaa aaccagccga cggcgagtcc cgcgagcggc
     3721 aacgtgtaga cgatgacctc gtggcccgag cggaactcgg ttgcgcgctc gagcaaccag
     3781 agaaacagcg ctgacgccgc gccagagaga actccgacca gcgagccgag cacgatccac
     3841 tgaccgagcg cggccaaacg ttcgcgtttc gtcatgtgac ggtcccaggt acggagacga
     3901 cgtcggagac gtccgcgagg cttcgcgtcg tggtcctgat gctgccgcag tgactgggtg
     3961 cgaaggtcgc gctcggtggt ggcgcgggct gagtagggct cgtcatgtgg cgtctgtctc
     4021 ctggccttgc gccggagggc tcacatgggg ctcctacggc gcccgtgcgg gcggcatcgt
     4081 aggagtcatt ggcggtcgcg aagggccgcg gttatcggcg gactccaccg ccatcgcgaa
     4141 ttgtccttcc cagcgtgctc ccgaaacgga cgagttgtca agcaagggcc gcgcgaatta
     4201 gccgtgcgat ccgcgaccgc gcccccgatg tcgcggacgc ggcgccgcag gggtggcggc
     4261 actcggagta gcagggctgg cggtggcgct cgtcgggccg gcaggtgctc gcacgggtgc
     4321 cggcgtcgac gtgaccgcct gcggcgcgat ggtcgtcgcg ctcgagctcg gcagcgttcg
     4381 tgcggcgttc atgcccgggg gcttcggcgc gagcgcgtag tagagcaagg ctcccgcacc
     4441 ggcgatggcc gcgacgccga gcgcacccac gagcagaacc agcttccgag tgggacgggg
     4501 cgctgccggc aacggacgct cggtgctcgg cgcccgagcg ggaagcagtt cggtccgaac
     4561 gagcggcggc gccggagcgg gaacgcgcgc gagcggct
//
LOCUS       DATIML010000285         4850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3232437, whole genome shotgun sequence.
ACCESSION   DATIML010000285 DATIML010000000
VERSION     DATIML010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4850
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3232437"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VLJ38_04945"
     CDS             <1..459
                     /locus_tag="VLJ38_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38889.1"
                     /translation="TFTSQVLGPKHSVSQGVGAAFGVVLAAVYMLSVAQKMFFGPLTN
                     EKNRGLNDLNMRETIALAPLVALVFVLGFFPNIFLSRMSAATDTLIDRFTESRKAYAG
                     LGPDSDPILQPRRGGPFERGYPEGPPQAAPAPEGGAEALNAHAAKLGGAP"
     gene            456..2012
                     /locus_tag="VLJ38_04950"
     CDS             456..2012
                     /locus_tag="VLJ38_04950"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HSU38890.1"
                     /translation="MNVLVPAAPILIVALGALLLMLAEAFGSPAKAAEAGEGIAAIDA
                     GAGRSAELALGASVILFAGAIVSLAVWWAGAVDTALPGLAPYLVMDRFSLFFCFTLCL
                     GGALAALLAGGYLPEHGLDRGEFFPLILFATVGSMALAAAGDLLTLFIALETMSLGVY
                     CMIGLRRGSTRASEAALKYFLLGSFAAALLLFGSALLYGATGHTDLVGIGTALRGMMG
                     QPNGGTALAIAGVVLMLVGLVFKISAVPFHMWTPDAYEGAPTPTTTFMAVAVKTAAFA
                     VLLRVVLTSFGGSELASWGTGWPPVLAVLAVLSMTVANLIAGRQSSVKRMLAYSSITH
                     AGYALVGLVAAAEKPELSASVLYYMLAYTVSTAGAFGALVLCGSRGAEAVSYADLAGL
                     GKRHPPAALAFSLFLLSLAGAPPTAGFFGKLYVFSAAISAAANNPALYVLVVVGLLNS
                     VLGAYYYLRVLVFMYMREPEPGAPIAKPMRSGYVGFSLALAAILVLALGIWPDSSLDV
                     ARAATLTGGP"
     gene            2014..3045
                     /locus_tag="VLJ38_04955"
     CDS             2014..3045
                     /locus_tag="VLJ38_04955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38891.1"
                     /translation="MKKLGRGWLVLSVLAAACAKEKPSSTSAPSASASAAPAPSLAAP
                     IASGLPDPELVSSVVNPNKAAAYSGPTGTVRGRVVVKGDKAPDVPQVLAKIPDACPLA
                     RQAYGKLFREGPGRALADVLVAVTGYPGYVPERAPAQLIEAKDCFFGTRTIALTFGQR
                     IDVLSKDQTYIPELLGEHGQPQMVATPGNPTPSALYPTHIGRYVLIDDLKLFMTADVI
                     VVKFATHAVTGLDGRFEIPGVPVGSVRLNALLSVTGGGAERTLTVEAGKPSEDIVLEI
                     PFDAAEYAKQADAGAPAAAASSVATLAPSASAASKTKAPGASTSAKPPKPSAAPATSA
                     KPSKHAPQP"
     gene            3260..>4850
                     /locus_tag="VLJ38_04960"
     CDS             3260..>4850
                     /locus_tag="VLJ38_04960"
                     /inference="COORDINATES: protein motif:HMM:NF041328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MXAN_6577-like cysteine-rich protein"
                     /protein_id="HSU38892.1"
                     /translation="MSSSKPRRVGLPTHLLPRALAWLGLLLVACTAKITSPPNEHGGG
                     PADTKALGSGGMSGAAGGGAGMTACPASQTSCNGVCTNLQTDIAHCGSCTVTCGAGTT
                     CQNGTCQTQCGAGQASCGGVCKTTVSDPQNCGSCGHACPNGQFCASGTCSASCPFQPC
                     DTANGPECADTMTNPNHCGGCGAACKSGQSCAQGQCVAACPSGQTACNGACVDLMTSA
                     ASCGTCGVACSAGTPCISGHCGCPSGQALCNGVCVDLTNDAHHCGACGTACSGALVCQ
                     AGQCVAGCSAGLTSCAGGCVDTNTSSANCGACNQACPAAEQCSAGKCGCPNGGTLCDS
                     ACVDAQTNAEHCGTCTTKCGSTQTCVAGKCSCPNGQTACGDACVDTKTSNDHCGGCNQ
                     PCTGGESCQAGACKCPAGQTACGTACVDTTMNDANCGGCGMACANGQTCMAGKCSGAG
                     GVGADGCSATLATNISLSRIDAFQSVQVGVMLNGAEVAPTARNTDLVAGRETVFRVFV
                     TPGSGFAARDLSARVTLVNGDA"
BASE COUNT          719 a         1672 c         1668 g          791 t
ORIGIN      
        1 accttcacgt cgcaggtgct cgggccgaag cacagtgtga gccagggcgt cggcgccgcg
       61 ttcggcgtgg tgctcgccgc ggtttacatg ctgagcgtcg cgcagaagat gttcttcggt
      121 ccgctcacga acgagaaaaa ccggggcctc aacgacttga acatgcgcga gacgatcgcg
      181 ctcgcgccac tcgtcgcgct cgtgttcgtg ctcggcttct tcccgaacat cttcctgtcg
      241 cgcatgtccg ccgcgaccga cacgctcatc gatcgcttca cggagtcccg caaggcttac
      301 gctgggctcg gcccggattc ggaccccatc ctgcagccgc ggcgcggggg acccttcgag
      361 cgcggctatc ccgagggacc gccgcaagcc gcgccggccc cggagggcgg cgccgaagcg
      421 ctcaacgccc acgccgcgaa gctcggaggt gcgccgtgaa cgtcctcgtt cctgccgctc
      481 ccattctgat cgtcgcgctc ggcgcgctcc tgctcatgct agccgaagcc ttcggctcgc
      541 cagcgaaagc cgcggaagcc ggcgagggca tcgcggccat cgacgccggt gcgggccgct
      601 cggcagagct cgcgctcggc gcgagcgtga ttctgtttgc gggtgcgatc gtgagcctgg
      661 ccgtttggtg ggccggcgcg gtggacacgg cgctgccggg gctcgcgccg tacctcgtga
      721 tggatcggtt ctcgctcttc ttctgcttca cgctctgcct cggcggcgcg ctcgcggcgc
      781 tgctcgccgg cggctacttg cccgagcacg ggctcgatcg cggcgagttt ttccccctga
      841 ttttgtttgc gacggtcggc tcgatggcgc tcgccgccgc gggcgacttg ctgacgctct
      901 tcatcgcgct cgagacgatg tcgctcggcg tctactgcat gatcggcctc aggcgcggca
      961 gcacgcgcgc gagcgaagca gcgctcaagt acttcctgct cggtagcttc gccgccgcgc
     1021 tgctcctgtt cgggagcgcg ctcctctacg gcgcgacggg ccacaccgat ttggtcggca
     1081 tcggcacggc gctgcgcggc atgatgggcc agccgaacgg cggcacggcg ctcgcgattg
     1141 cgggtgtcgt gctcatgctc gtcggcctcg tcttcaagat cagcgcggtg ccgttccaca
     1201 tgtggacgcc cgacgcgtac gaaggtgcgc cgacgcccac cacgacgttc atggcggtgg
     1261 cggtgaagac cgcggcgttc gccgtgttgc tccgcgtcgt gctcacgtcg ttcggcggca
     1321 gcgagctcgc gagctggggc acgggttggc cgccggtcct cgccgtgctc gccgtgctct
     1381 ccatgacggt cgcgaacctc atcgccggcc ggcagtcgtc ggtgaagcgc atgctcgcgt
     1441 actcgtcgat cacgcacgcg ggttacgcgc tggtcggtct cgtcgctgcg gcggaaaagc
     1501 cggagcttag cgcgagcgtg ctctactaca tgctcgcgta cacggtctcg acggccggcg
     1561 cgttcggggc gctcgtgctc tgcggcagcc gcggcgccga agcggtgtcc tacgcggatc
     1621 tcgccggtct cggtaagcgc catccacccg ctgcgctcgc cttctcgctg ttcttgctgt
     1681 cgctcgcggg cgcgccgccc acggctgggt ttttcggcaa gctgtacgtg ttttcggcgg
     1741 cgatcagcgc cgcagccaac aatcctgcgc tctacgtgct ggtcgtcgtg gggctcttga
     1801 acagcgtgct cggcgcttac tactacctcc gcgtgctcgt gttcatgtac atgcgcgagc
     1861 ccgagccggg ggcgcccatc gcgaaaccga tgcgctcggg ttacgtcggc ttctcgctcg
     1921 ctctcgccgc gatcctcgtg ctcgcgctcg gcatctggcc cgactcgtca ctcgacgtgg
     1981 cgcgcgcggc gacgctcacc ggcgggccct gacatgaaga agctcgggcg cggctggctc
     2041 gttctgtcgg tgctcgcggc cgcgtgcgcc aaagaaaagc cgagcagcac gagcgccccg
     2101 tcggcgagcg cttcggctgc gccggcgcct tcgctggccg caccgatcgc ctcgggattg
     2161 cccgatccgg agctcgtgag ctcggtcgtg aatcccaaca aggcagcggc gtacagcggt
     2221 ccgaccggca ccgtgcgcgg gcgcgtcgtc gtgaagggcg acaaggcccc cgacgtgccc
     2281 caggtgctcg ccaagatccc cgacgcctgc ccgctggcgc gacaagccta cggcaagctc
     2341 ttccgtgagg gaccgggtcg cgcgctcgcc gacgtgctcg tcgcggtgac gggctacccg
     2401 ggttacgttc ccgagcgcgc gccggctcag ctcatcgaag ccaaggattg tttcttcggc
     2461 acgcgcacca tcgcgctcac gttcggtcag cgcatcgacg ttttgagcaa ggatcagacg
     2521 tacattcccg agctgctcgg tgagcacggc caaccgcaaa tggtcgcgac gcccggtaac
     2581 cccacgccga gtgcgctcta cccgacgcac atcggccgct acgtcttgat cgacgacttg
     2641 aagctgttca tgacggccga cgtgatcgtc gtgaagtttg cgacgcacgc cgtgaccggt
     2701 ctcgacggac gcttcgaaat cccgggcgtc cccgtcggct ccgtgcggtt gaacgcgctc
     2761 ctgtccgtga cgggcggcgg cgcagaacgc acgctgaccg tcgaggccgg caagccgagc
     2821 gaagacatcg tgctcgagat cccgttcgac gcggccgagt atgcgaagca ggccgacgcc
     2881 ggcgcgcccg cggccgcggc atcgagcgtg gcgacgctcg caccgagtgc gtcggcggct
     2941 tcgaagacga aggcacccgg cgcttcgact agcgcgaagc cgccgaagcc gagcgccgcg
     3001 cccgcgacga gcgcgaagcc gtcgaagcac gcgccgcaac cgtaacggcg acgctcggaa
     3061 cgcattttca aagtccgcgc tctcgccgcg tcagcggcgc agtcaggagc gatttttccg
     3121 cgttgcccgc acgaactccg gattcgtttc cgatgccgcg gatatttgac gctttcccga
     3181 taatgcgagt gtcaatcggg ccaacgcaaa catgcgtcag acacgagatt gaaaggacaa
     3241 gaatgctaaa ctggtacgag tgagctcgtc taagccgcgc agggtggggc ttccgacgca
     3301 tcttctaccg cgtgcgctgg catggctcgg gctgctgctc gtcgcctgca cggccaaaat
     3361 cacctcgccg ccgaatgagc acggcggggg ccccgccgac accaaggccc tcggcagcgg
     3421 gggcatgagc ggcgcagcgg gcggaggcgc aggcatgacc gcctgccccg catcgcaaac
     3481 ctcgtgcaac ggcgtgtgca ccaatctcca aaccgacatc gcacactgcg gtagctgcac
     3541 ggtgacgtgc ggcgccggca cgacctgtca aaacggcacg tgccagacgc aatgcggcgc
     3601 gggccaagct tcttgcggcg gcgtttgcaa aacgaccgtc agcgatccgc agaattgcgg
     3661 ctcgtgcggg catgcctgcc cgaacggcca attctgcgcg agcggcacct gctcggcgag
     3721 ctgtccgttc cagccctgcg acacggcgaa cggtcctgaa tgcgccgaca cgatgacgaa
     3781 cccgaaccat tgcggcggtt gcggggccgc gtgcaagagc ggacagtcct gcgcgcaagg
     3841 gcagtgcgtc gcggcgtgtc ccagcgggca gacggcgtgc aacggcgcgt gcgtcgacct
     3901 gatgaccagc gccgcaagct gcggcacctg tggcgtggcc tgcagcgccg gaacgccctg
     3961 catcagcggg cactgtgggt gtccgagcgg ccaggcactg tgtaacggcg tgtgcgtcga
     4021 tttgacgaac gacgcgcacc actgcggggc ttgcggcacg gcctgctcgg gcgcgctcgt
     4081 gtgtcaggcc gggcagtgtg tggccgggtg ttcggctggg ctcacgtcct gcgcgggcgg
     4141 ctgcgtcgat accaatacgt cgagcgcgaa ctgcggcgcg tgcaaccagg cgtgcccggc
     4201 cgccgagcaa tgcagcgccg gcaagtgcgg gtgtccgaac ggcggcacgc tctgcgacag
     4261 cgcgtgcgtc gatgcgcaga cgaacgccga gcattgcggg acttgcacga cgaagtgcgg
     4321 ctcgacgcag acgtgcgtcg cgggcaagtg cagctgcccg aacggccaga ccgcctgcgg
     4381 cgacgcgtgc gtcgatacca agacgagcaa cgatcactgc ggcggctgca accagccgtg
     4441 tacgggcggc gagagctgcc aggccggcgc gtgcaagtgc cccgcgggtc aaaccgcctg
     4501 cggcacggcg tgcgtcgata ccacgatgaa tgacgccaac tgcggcggtt gcggcatggc
     4561 gtgcgcgaac gggcagacgt gcatggcggg caagtgcagc ggcgcgggcg gcgtcggcgc
     4621 cgacggctgc tcggccaccc tggcgacgaa catcagcttg agccgcatcg acgcgttcca
     4681 atcggtgcaa gtcggcgtca tgctgaacgg cgccgaggtc gcgcccaccg ctcgcaacac
     4741 cgatctcgtc gcgggacgcg agaccgtgtt tcgcgtcttc gtgacgccgg ggtcgggctt
     4801 tgcggcacgc gatctctcgg cgcgcgtcac gctcgtcaac ggcgacgcga
//
LOCUS       DATIML010000286         7682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4678007, whole genome shotgun sequence.
ACCESSION   DATIML010000286 DATIML010000000
VERSION     DATIML010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7682
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4678007"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1074)
                     /locus_tag="VLJ38_04965"
     CDS             complement(<1..1074)
                     /locus_tag="VLJ38_04965"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSU38893.1"
                     /translation="MPAARQRKIGLVLSGGGMRGAYEVGVVAGIAEVMEGELRRGPLF
                     DVYSGTSVGAINAAYFAANADEPGHGAARLAKLWQGLKLADHAKVRPFGLWPGSIKRR
                     IQRFTSSEHQGNSLLDTRALEVVIRRAVQWERLHRNIASGRVHALMVAALHVASGRTT
                     IFAEHAPGVQLQAARDERRTTVEGRITADHVLASAAIPLLFAMRKVGEHYYCDGGLRF
                     NTPIAPAIRAGAERLVVISVRHMQSTGEVDAEEAADRGEGQDVGPVFLIGKLLNALLL
                     DPVAYDLQMMDRLNQMMEVLEEALPADQLERVQKVWIKHRGAPYRRLDTLVFTPSEDL
                     GRKAGDYIRTRLDTSEIQTLARYF"
     gene            1185..2141
                     /locus_tag="VLJ38_04970"
     CDS             1185..2141
                     /locus_tag="VLJ38_04970"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HSU38894.1"
                     /translation="MSQDLALRAFGRTDVGRSRPNNEDIALVRGDLGLYAVADGAGGH
                     RSGEIASSLATRSLENYFGATIRRTHEEPEFDRFGIPFGARRLSAAILKANRDVIEIA
                     KSTPAHKGMGSTVVAACFSPRSGLMHVGHAGDSRCYRLRGGHLEQLTQDHSLLTDVLE
                     QRPELDDSVLERLPKSVVTRALGLDPKLRLSLRSYAVVAGDRYLLCSDGLSGPVPSID
                     IAEAIGNHGGPEMVVEDLISRANAAGGPDNIAAVVIECTEGPESKSVPPPPPGGVRAS
                     RDAFRSDPELLILGIEELESLDADSASDDLLQALTTLLGKRP"
     gene            2138..3196
                     /locus_tag="VLJ38_04975"
     CDS             2138..3196
                     /locus_tag="VLJ38_04975"
                     /inference="COORDINATES: protein motif:HMM:NF013322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HSU38895.1"
                     /translation="MSVTPERPPLWTLGLAGVGGAIGPELTDFVVDELPAYAPSGSGD
                     HWYVLVKKRGMNTRDAALAIARASGSSERDIGYAGMKDRHGVTTQWLSVPGRAPAPDT
                     WQLAAELTLVEVSRHTNKLRTGHLRGNRFDVGLVGIEEGAEEKARALFAELERRGHVN
                     YFGSQRFGRDGRNLAEAVAWLGGEARLPRGRERFLAKLYASALQSEIFNRYATRRVQR
                     GLGELLHGEVVRLAGAGASFVVEDVAREAPRWQARDLCLTGPMPGPKMREAKADAADL
                     EAEVIAELGLDPAALDELGRHAPGTRRDLLVVPEGASVATEGDRLRLRFTLPAGSYAT
                     MLVRELTRADEASARSDG"
     gene            3242..4132
                     /locus_tag="VLJ38_04980"
     CDS             3242..4132
                     /locus_tag="VLJ38_04980"
                     /inference="COORDINATES: protein motif:HMM:NF018597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HSU38896.1"
                     /translation="MPFPHENRPPARRGRTLAPFLCLLTSCATFRPLPPPTPEVPLAD
                     WERAGDGADARETEGASARRASAPALAKSAGHRDGDGPYAPPAATSPSPIPGSTTCLS
                     ELRSYDVLFRESAPVVGINTPVVLEGRLDGIRFYAPDHRAFVADCRLVLALRLITSDL
                     RALGVSEVRFSGAYVYKLTHPGRMSMHAYGLAADLHAFNVAGTLLEVKRDFARGAGCG
                     GSLPALNQIACRIRARGIFKEQLGPDDNAAHFDHFHVGLKPLPGELAPNLPLPVAAKP
                     HHRAARVTAPKRSVQQRSAR"
     gene            complement(4089..4784)
                     /gene="mutH"
                     /locus_tag="VLJ38_04985"
     CDS             complement(4089..4784)
                     /gene="mutH"
                     /locus_tag="VLJ38_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HSU38897.1"
                     /translation="MSGARLESTQAPSSEIELLERAHALAGLRLGELALRLGRPVPAD
                     LRRAKGFVGQLVELGLGATAGSRAGPDFAHLGIELKTLPVDPSGRPVESTFVCTISLT
                     EVGDIEWEQSPVRAKLSRVLFVPVDGERERPVAERRLGTPLLWSPSPEEESELKFDWD
                     ELAGRIGRGDVEGITGHLGRYLQVRPKAADSHARRRALDADGVAFQALPRGFYLRALF
                     TARIVAAHYALAR"
     gene            complement(4858..5337)
                     /locus_tag="VLJ38_04990"
     CDS             complement(4858..5337)
                     /locus_tag="VLJ38_04990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38898.1"
                     /translation="MLLRTMKPLPFERLHDAEGSVTLGWAGDSVVHACVSGGLSAALG
                     ARLASEVQTLVGGFSGVHYFCDAAKLTRYDLLARSAFVRMALANRRCFASFALLTWPA
                     AVSPAANAFTAALGDSVTLFRDASDFERHLLELAPLARHRIEPVNAARFESAARPLR"
     gene            5459..6097
                     /locus_tag="VLJ38_04995"
     CDS             5459..6097
                     /locus_tag="VLJ38_04995"
                     /inference="COORDINATES: protein motif:HMM:NF022673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3025 domain-containing protein"
                     /protein_id="HSU38899.1"
                     /translation="MAAPAAWNGRFFEQDPRFWPIAPAARAFAEHVDFPAPEELVAPG
                     VSFVTARKPRRVRRQLTPDAAYDARILRGEVPTRPRSWHDFLNALVWATFPASKRAVH
                     ALQAALLERARQPGSGALPNARAREHDALALLDEGGVLVLTAGRETLTLGFGHALYEA
                     LVRGGPSVTASALSFELSRLPAVTEAAAIADALLAARLEKPLAPEDLSRREF"
     gene            6176..>7682
                     /locus_tag="VLJ38_05000"
     CDS             6176..>7682
                     /locus_tag="VLJ38_05000"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU38900.1"
                     /translation="MVDPSPLSSSGPGPAGTEPARERAELGPGASAPAPDRYVEMNRR
                     LTSLNGMGAAGITALTMAAIWGQWQRLAVVGGIQLVVIAFNQWIDRAELARNGRSIEL
                     ERALVNVASALVVNHVAGWPAPVWLWPPFVALAFDHLDRKVALLMLGSMTAVQDIAAF
                     SEHVPWMYPVMSTTFAVFASELSRRRFAVTREMLVDSDQQRAAIAEAHERLKLEALAR
                     QEAERELQQAHKLEAVGRLASGIAHEINSPVQFVGDSILFLRDATADLMLVLEKNRAL
                     REVARASASLTEISMVVRQADAAEKDADLAYIVENVPKAFERALDGLERVTRIVRSMK
                     AFAHPDASEMLAADINHAVETTLTIARNEYKYVADVETRFDTLPPVRCHLGDVNQAVL
                     NIVVNAGHAIADVVQGTERRGRIVVRTRVEGDHVVIAVSDTGGGIPLAIRERIFDPFF
                     TTKEIGKGTGQGLAIARSVVVSRHGGTLTFDTELGKGTTFYLRLPIAGRAVA"
BASE COUNT         1233 a         2656 c         2599 g         1194 t
ORIGIN      
        1 gaaataacgg gccaaggtct ggatttcgct cgtgtcgagc cgggttcgga tgtagtcgcc
       61 ggctttcctg ccgagatcct ctgacggcgt aaatacgagc gtatcgagcc gtcgataagg
      121 ggcgccgcgg tgtttgatcc aaaccttttg cacccgctcg agttggtcgg ccggcagggc
      181 ctcctccagc acctccatca tttggttcag tcgatccatc atctgcagat cgtaggccac
      241 cggatcgagc agcagcgcgt tcaagagctt gccgattaaa aagacggggc ccacgtcctg
      301 gccctcgccg cgatcggccg cttcttccgc gtcgacctcg cccgtgctct gcatgtgccg
      361 caccgagatc acgaccaggc gttccgcgcc ggcgcgaatt gcgggcgcga tgggcgtgtt
      421 gaaccgcagg ccaccgtcgc agtaatagtg ctcgcccacc ttgcgcatgg cgaacaggag
      481 cgggatcgcc gccgaggcga gcacgtggtc ggccgtgatg cggccctcga cggtggtgcg
      541 gcgttcgtcg cgggcggctt gcagctgaac gcccggcgcg tgctcggcaa agatcgtggt
      601 ccggccggac gcgacgtgga gcgcggcgac catcagtgca tgcacgcggc ccgaagcgat
      661 gttgcgatgc aggcgctccc actgcacggc gcggcgaatc acgacttcga gcgcgcgcgt
      721 gtcgagcagc gaattgccct ggtgttcgga cgacgtgaag cgttggatcc ggcgcttgat
      781 gctgccaggc cagagtccga acggccggac cttggcgtga tcggcgagct tgaggccctg
      841 ccagagcttg gcgaggcgcg cggcgccgtg gccgggctcg tccgcgttcg cggcaaaata
      901 ggccgcgttg atcgcgccga ccgaggtgcc cgagtacacg tcgaagagcg gcccccgccg
      961 gagctctcct tccatcacct cggcgatgcc cgcgaccacc ccgacctcgt acgcgccccg
     1021 catgcctcca cccgagagca cgaggccgat ttttcgctgg cgagcggcag gcactgctcg
     1081 ttacagcatg acagctggtg gcctttgcct caagcgctag gccgccccgc cggtcacgga
     1141 tttcccgtgc aggctatgtc tatactcgag acgcacactt cgatatgtcg caagatctcg
     1201 cgctccgcgc attcggccgc accgatgtgg gtcgaagtcg tcccaacaac gaggacatcg
     1261 cgctcgtgcg cggcgatctc ggactctacg ccgtcgctga cggtgcaggc ggtcaccgct
     1321 cgggcgaaat cgcgagctca ctcgcgactc gatcgctcga aaactatttc ggcgcgacga
     1381 tccgccgcac gcacgaagag cccgagttcg atcggttcgg tattcccttc ggcgctcgcc
     1441 ggctctccgc ggcgatcctg aaggccaatc gcgacgtgat cgagatcgcc aaatccacgc
     1501 ctgcgcacaa gggcatgggc tcgaccgtcg tcgcggcgtg tttctccccg cgttcggggc
     1561 tgatgcacgt cgggcacgcc ggggacagtc gctgttaccg gctgcgcggc ggtcacctcg
     1621 agcaactcac gcaagatcat tcgctgctca ccgacgtgct cgagcagcgg cccgagctcg
     1681 acgactccgt gctcgaacgc ctgccgaaga gcgtcgtcac gcgcgcgctc gggctcgatc
     1741 cgaagctacg cttgtcgctc cggtcgtacg ccgtggtcgc gggcgatcgc tacttgctct
     1801 gcagtgacgg cctgagcggt cccgttccat ccatcgacat cgcggaagcc atcggcaacc
     1861 acggagggcc cgaaatggtg gtcgaggatt tgatttcgcg agcgaacgcc gcgggcggtc
     1921 ccgacaacat cgccgcggtc gtgatcgagt gcacggaggg gccggaatcg aagagcgtgc
     1981 cgccgccgcc gcccggtggc gtgcgcgcga gtcgggacgc gtttcgctcc gatccggagc
     2041 ttttgatttt gggcatcgaa gagctcgagt cgctcgacgc ggactcggcg agcgacgatc
     2101 tgttgcaggc gctcacgacg cttttgggca agcgaccatg agcgtcaccc cggaacgacc
     2161 gccgctctgg acgctcgggc tagccggcgt gggcggcgcg atcggccccg agctcacgga
     2221 tttcgtcgtc gacgagctcc ccgcctacgc cccatcgggc agcggcgacc actggtacgt
     2281 gctggtcaaa aagcgcggca tgaacacgcg cgacgcggcg ctcgccatcg cgcgcgccag
     2341 cggcagctcg gaacgcgaca tcggctatgc ggggatgaag gatcggcacg gcgtgacgac
     2401 gcagtggctc tccgtgccgg gccgcgctcc ggcgcccgac acctggcagc tcgccgccga
     2461 gctcaccctc gtcgaagtct cgcgccacac gaacaagctc cgcacgggcc acctgcgcgg
     2521 caaccgcttc gacgtgggcc tcgtcggcat cgaagaggga gccgaggaga aagcacgtgc
     2581 cttgttcgcg gagctcgagc ggcgcgggca cgtcaattac ttcggctcgc agcgcttcgg
     2641 gcgcgacggg cgcaatctcg ccgaagcggt ggcctggctc ggcggcgagg cgcggctccc
     2701 acgcgggcgc gagcgcttcc tcgcgaagct ttacgcgagc gcgctccaat cggagatctt
     2761 caatcgctac gcgacgcggc gcgtgcagcg cggcctcggg gagctcctgc acggcgaggt
     2821 cgtgcggctc gctggagccg gcgcgtcgtt cgtcgtggag gacgtggcac gcgaggcgcc
     2881 acgctggcag gcccgcgatc tctgcctcac cgggcccatg ccgggcccga agatgcgcga
     2941 agcgaaggcc gacgccgcgg acctcgaggc cgaagtcatc gcggagctcg gcctcgatcc
     3001 tgccgcgctc gacgagctcg gacgccacgc gccgggcacg cgccgtgacc tgctcgtcgt
     3061 gcccgaaggc gcgagcgtcg cgaccgaagg agaccggctg aggctccgtt tcacgctgcc
     3121 ggcggggagt tacgccacga tgctcgtgcg cgagctcacg cgcgccgacg aagccagcgc
     3181 acgctccgac ggctgagtca gcattttggc cgagcgtctc ggtgcatgga agactgcggc
     3241 ggtgccgttc ccgcacgaaa accgccctcc cgctcggcgt ggccgaacgc tagcgccatt
     3301 tttgtgcctg ctcacgagct gcgcgacgtt ccggccgctc ccgccgccca cgcccgaagt
     3361 cccactcgct gactgggagc gcgcgggcga cggggcggac gctcgtgaga cggaaggagc
     3421 gagcgctcgc cgcgcgtccg cgcccgccct cgccaagagc gccggccatc gtgacggcga
     3481 cggaccctac gcaccgcccg cggccacctc gccgagtccc attcccggga gcacgacgtg
     3541 cttgagcgag ctccgctcct acgacgtcct gtttcgcgag agcgcgcccg tggtcggcat
     3601 caacacgccc gtcgtgctcg agggacgtct cgacggtatc cgcttctacg cgcccgatca
     3661 tcgagccttc gtcgctgatt gccggctcgt gctggcgctg cgcttgatca cgtccgattt
     3721 acgcgcgctc ggggtgagcg aagtacgctt ttccggcgcg tacgtctaca agctgacgca
     3781 cccgggacgg atgagcatgc acgcgtatgg tctcgccgcc gacctgcacg cgttcaacgt
     3841 cgccggcacg ctgctcgagg tcaaacgcga ttttgcacgt ggtgccggct gcggcggctc
     3901 actgccggcg ctgaaccaaa tcgcctgccg tatccgcgcg cgggggatct tcaaagagca
     3961 actcggtccc gacgacaacg ccgcgcactt cgaccatttt cacgtcggct tgaagccgct
     4021 gccgggcgag ctcgcgccga acctgccgct gcccgtcgca gccaagccgc accaccgggc
     4081 ggcgcgcgtc accgcgccaa agcgtagtgt gcagcaacga tccgcgcggt gaacagggcg
     4141 cgcaaataga agccgcgcgg cagcgcctga aacgcgacgc cgtcggcgtc gagcgcacgg
     4201 cgccgcgcgt gagaatcggc ggctttgggg cgcacttgca agtagcgtcc gagatgaccc
     4261 gtgatgccct cgacgtcacc gcggccgatg cgaccggcga gctcgtccca gtcgaacttg
     4321 agctcgctct cctcctcggg gctcgggctc cacaagagcg gcgtgccgag gcgccgctcg
     4381 gccacggggc gctcgcgttc gccgtcgacg ggaacgaaca ggacgcggga aagtttcgcg
     4441 cgtaccggcg actgttccca ttcgatgtca ccgacttcgg ttagtgaaat cgtgcagacg
     4501 aacgtcgact cgacggggcg accgctcgga tcgaccggta acgtcttgag ctcgatgccg
     4561 aggtgcgcga aatcgggccc ggcacgcgag cctgccgtcg caccgaggcc gagctcgacg
     4621 agctgtccga cgaagccctt ggcgcggcgc agatcggccg gaacgggacg gcccaagcgt
     4681 agggcgagct ctccgagccg caacccggca agcgcgtgtg cacgctcgag aagctcgatt
     4741 tcggagctcg gggcttgcgt ggattcgagg cgcgcgccgc tcatcgggcg gcgcacagcg
     4801 tgcggcagcg tgagggtgcg tgcaagtcgc gggcgcgcgc gagtgacggc gccgcggtca
     4861 gcgcaatggg cgcgcggcgg actcgaagcg tgcggcgttc accggctcga tgcgatgacg
     4921 cgcgaggggc gcgagctcga gcaggtggcg ctcgaagtcg ctcgcgtccc gaaatagcgt
     4981 gacgctgtcc ccgagcgcgg ccgtgaaggc gttcgccgcc gggctcaccg cggcgggcca
     5041 ggtgagcagc gcgaaggacg caaagcaccg ccgattggcg agggccatgc gaacgaacgc
     5101 gctgcgcgcg agcagatcgt agcgcgtgag cttcgcggca tcgcagaaat agtggacccc
     5161 gctgaagccg cccacgagcg tttggacctc actcgcgagc cgcgcgccga gcgcggccga
     5221 gaggccgccg ctgacgcagg cgtggaccac agagtcgccc gcccagccca gcgtcaccga
     5281 cccctcggcg tcgtgcagtc tttcgaacgg taacggcttc atggtgcgta gaagcacgtc
     5341 gtgctcctgc ccgggagctc gcgcactcgt cattcgaacc tacggcagcc cacgacgccg
     5401 acattagaag gcgccgaggt tttttcgacg cagcttcggg gtgcgataat gtcggaacgt
     5461 ggcggcaccc gcagcctgga acggacgctt cttcgagcaa gatccgcgct tttggccgat
     5521 cgcgcccgcc gcgcgcgcct tcgccgaaca cgttgatttc ccggcgcccg aggagctcgt
     5581 cgcgcccggc gtgagtttcg tcaccgcacg aaaacctcgc cgcgttcgcc gtcagctaac
     5641 gccggacgcg gcgtacgacg cccgcattct gcgcggcgaa gtgccgacgc gcccgcgctc
     5701 gtggcacgac ttcttgaacg cgctcgtgtg ggcgaccttt ccggcgagca aacgcgccgt
     5761 ccatgcgctg caggcagcac tgctcgagcg cgcgcgccag cccggttcgg gcgcgctccc
     5821 gaatgcccgc gcccgcgagc acgacgcgct cgcgctactc gacgagggcg gcgtcctcgt
     5881 gctcacggcc ggacgtgaaa cgctgacgct cggcttcggt cacgccttgt acgaagcgct
     5941 cgtacgaggt gggccatccg tcaccgcgag cgcgctgagc ttcgagctgt cgcgactgcc
     6001 ggccgtcacc gaagcagccg cgatcgccga cgcgctcttg gcggcacggc tagaaaaacc
     6061 gctagctccc gaagacttgt cgcgacgcga gttctgaaac atcgccggga cgaggcaaaa
     6121 gccgtatcaa ttcgggatac taaagccgag cgcccgcggg ccgttctacc tatcgatggt
     6181 cgacccgagc ccgctctcgt cgagcgggcc cgggcccgcc ggaacggagc ctgcccgcga
     6241 gcgcgcggag ctcgggcccg gagcgtccgc gccggctccg gatcggtacg tggagatgaa
     6301 tcggcgcctc acgtcactga acggcatggg cgcggctggc atcacggcgc tcacgatggc
     6361 cgcgatctgg ggtcaatggc agcggctcgc cgtcgtcggc ggcattcagc tcgtcgtcat
     6421 cgcgttcaat cagtggatcg accgagcgga gctggcgcgc aacggacgct cgatcgagct
     6481 cgagcgcgcg ctcgtcaacg tcgcctctgc gctcgtcgtc aatcacgtcg cggggtggcc
     6541 cgcgccggtc tggctgtggc cgccgttcgt cgcgctcgct ttcgatcacc tcgaccgcaa
     6601 ggtggcgctg ctgatgctgg gttcgatgac ggcggtgcag gacatcgccg cgttctccga
     6661 gcacgtgccg tggatgtatc cggtcatgtc cacgacgttc gccgtgttcg cgtcggagct
     6721 ctcacgccgc cgcttcgccg tgacgcgcga gatgctcgtc gacagcgacc agcagcgggc
     6781 ggccatcgcc gaggcgcacg agcggctcaa gctcgaggcg ctggcgcgtc aggaagccga
     6841 gcgcgagcta cagcaagcac acaagctcga agcggtcggg cggctcgcct cgggcatcgc
     6901 tcatgaaatc aattcgcccg tgcagttcgt gggcgacagc atcttgttcc tgcgcgatgc
     6961 cacggccgat ttgatgctcg tgctcgaaaa gaaccgcgcg ctgcgcgagg tcgcccgcgc
     7021 gagcgcgtcc ttgaccgaaa tctccatggt cgtccgtcag gccgacgcgg ccgaaaagga
     7081 cgccgacctc gcgtacatcg tcgaaaacgt gcccaaagcg ttcgaacgcg cgctcgacgg
     7141 cctcgagcgc gtgacgcgga tcgtacgttc catgaaggcc ttcgcacatc cggatgcgag
     7201 cgaaatgctc gcggcggaca tcaaccacgc cgtcgagaca acgctcacga tcgcacgcaa
     7261 cgagtacaag tacgtggccg acgtcgagac gcgcttcgac accttgccgc ccgtgcgttg
     7321 ccatttgggc gacgtgaacc aagcggtcct caatatcgtg gtgaacgccg gacacgccat
     7381 cgccgacgtc gtgcagggca cggagcggcg gggccgcatc gtggtgcgca cccgagtcga
     7441 aggcgatcac gtcgtcatcg ccgtgagtga taccggcggc ggaattccgc tcgccatccg
     7501 tgaacgcatc ttcgatcctt ttttcaccac caaagagatc ggcaagggca cgggacaggg
     7561 actcgcgatc gcgcgctccg tcgtcgtgag ccgccacggc ggcacgctga ccttcgacac
     7621 cgaactcggc aagggcacga cgttctacct gcgcttgccc atcgccggcc gcgccgtcgc
     7681 cg
//
LOCUS       DATIML010000287         3170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3233095, whole genome shotgun sequence.
ACCESSION   DATIML010000287 DATIML010000000
VERSION     DATIML010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3233095"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2013
                     /locus_tag="VLJ38_05005"
     CDS             <1..2013
                     /locus_tag="VLJ38_05005"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU38901.1"
                     /translation="PALAAAGLLTLLGDEDWRVRKEAVSVVQGLAPEPNLLAALIGSL
                     GPSDNVGLRNATVEALGAFGTDAVDAVAAALRGLDADGRKLAAEALARTGQSAALPVL
                     RGLLQDPDPNVCVAAVEAIAGLGIDGALEVVPALLSCLDAAEEFTRLAALDGLRALGV
                     NLPWERLQRLKDDAALEYAVLASIGRSGDARAAGPLVSALSKARGGTLIATLRSLVDL
                     ARSGAGPARALKAEAVGLDAATRARLIELASSAEGREGRGVALLALGALGVQGAAGHV
                     LEALGDEMLQGAAEEALDWLGPLAVAPLIERAAYAMPAGRAACLEIAARLADDHGAAS
                     VRSEALAALGDPASEVVRAALGALSVVGDESCLVPVAALLSRDAAPAIRRATETSLAV
                     LGARFADAARELARRAPPASLEAHAAAVLIRVVGPPVRGSLEADVEFLAAALSSAAPA
                     VRRAALPALAAVGGALAVEPIALALTDEEREVRLAAVRALGRLRSAEGEALGLPNLVA
                     LAERAADDEMRTAALLALGETSDARALPILRPLVRSGDPKAAVAAIEALGAFAEARRN
                     EALIDGLSHPASEVVKAAVRALGESNDGRVLAHLSVALDHEAWDVRRLAADVLGRYGE
                     GAVPPLRARLAVEDDPLVREAIGRALESMVGAHRSPLPTRGSYLPR"
     gene            2010..2891
                     /locus_tag="VLJ38_05010"
     CDS             2010..2891
                     /locus_tag="VLJ38_05010"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HSU38902.1"
                     /translation="MTPSRLLPHAQLGTEEFRLLRDLIYEHAGLHYDDDAMFLFERRL
                     VDRVEALGLDDFYTYYKYLRFDPRGPGELEEAIERLTTKETYFFRQEYQLRAFRDQLL
                     PELAQTNAARKRLGVWSAGCATGEEAYTIAILLLESGLFRNWDLKVVGSDICRGSVTA
                     ARRGIYREAAFRTTPHEVRAQYFANVGEGAEVAPDLKKICHFGQLNLMDGARALMVGQ
                     VDVIFCRNVLIYFDMKSRRRVIDGFYERLVPGGYLLLGHSESLLNVSTAFELVHLRED
                     LVYRKPLGAWRFNGQRT"
     gene            2892..>3170
                     /locus_tag="VLJ38_05015"
     CDS             2892..>3170
                     /locus_tag="VLJ38_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU38903.1"
                     /translation="MPIEGVSPLKVLIVDDSAFNRRSIAEILSSSASIEIVGRAADGE
                     EALRMVSSLKPDVITLDLEMPKMDGFTFLRILMSRTPVSVIVISSYSQK"
BASE COUNT          441 a         1129 c         1097 g          503 t
ORIGIN      
        1 ccggccctcg ccgcggcggg cctgctcacg ctgctcggcg acgaggattg gcgcgtgcgc
       61 aaggaggccg tctccgtggt tcaagggctc gccccggagc cgaacctgct cgccgcgctc
      121 atcggctcgc tcggtccgtc cgacaacgtc ggcctgcgca acgcgaccgt ggaggcgctc
      181 ggtgccttcg gcacggacgc cgtggacgcg gtcgccgcag ccctgcgcgg gctcgacgcc
      241 gacgggcgca agctcgccgc cgaagcactc gcccgcacgg gccaatcggc cgcgctgccc
      301 gtcttgcgcg gcctcctgca ggaccccgat ccgaacgtgt gcgtcgcggc cgtcgaagcc
      361 atcgccgggc tcggcatcga cggtgcgctc gaggtcgtcc ccgcgctcct gagttgcctc
      421 gacgccgcgg aggagttcac gcgcctcgcg gcgctcgacg gcctgcgcgc gctcggcgtg
      481 aacctgccgt gggaacgtct gcagcgcctc aaagacgacg cggccctcga gtacgccgtg
      541 ctcgcgtcca tcggccggag cggcgacgcg cgtgcggccg ggccgctcgt ctccgctttg
      601 tcgaaggcgc gcggcgggac gttgatcgcg acgctgcgct ccctcgtcga tctcgcgcgc
      661 tcgggtgccg gccctgctcg cgcgctcaag gccgaagcag tcgggctcga cgccgccact
      721 cgcgcgcgac tcatcgagct cgcctcgagc gccgagggtc gcgagggccg cggggtggcg
      781 ctactcgcgc tcggtgcgct cggcgtgcag ggtgcggcgg ggcacgtgct cgaggcgctc
      841 ggcgacgaaa tgctgcaggg cgcggcggaa gaagcgctcg actggctcgg accgctcgcg
      901 gtcgctccgc tcatcgaacg cgcggcgtac gccatgcccg ccggtcgcgc ggcttgcctc
      961 gaaatcgccg cgcgtctcgc ggacgatcac ggcgctgcca gtgtccgctc cgaagcgctc
     1021 gccgcgctcg gtgatccggc gtccgaggtc gtgcgcgccg ccctcggggc gctctccgtc
     1081 gtcggcgacg aaagctgtct cgtgcccgtg gcggcgctgc tctcgcgcga cgctgcgccc
     1141 gccatccgtc gcgctacgga gacgtcgctc gccgtgctcg gcgcgcgctt cgccgacgcc
     1201 gcgcgcgagc tcgcacgccg cgcgcccccc gcgtcgctcg aggctcacgc cgccgccgtc
     1261 ttgatccgcg tcgtcgggcc gcccgtgcgc ggcagcctcg aggccgacgt cgagttcctc
     1321 gccgccgcgc tctcgagcgc cgcgcccgcc gtacggcgcg cagcgctgcc cgcgctcgcg
     1381 gccgtcggcg gcgccctggc cgtcgaaccc atcgccctcg cgctcaccga cgaagaacgc
     1441 gaggtacggc tcgcggccgt gcgcgcgctc ggccggttgc gctccgcgga aggcgaagcc
     1501 ctcggcttgc cgaacctggt cgcgctggcg gaacgcgccg ccgacgatga aatgcgcacc
     1561 gcggcgctgc tcgccctcgg cgaaacgagc gacgcgcgcg cgttgcccat tttgcgcccg
     1621 ctcgtgcgct cgggcgatcc caaggccgcc gtggcggcga tcgaagcgct cggggcgttc
     1681 gccgaggcgc ggcgcaacga ggcgctcatc gacggcctgt cgcaccccgc gtccgaagtc
     1741 gtcaaagcgg ccgtgcgcgc gctcggcgag agcaacgacg ggcgcgtgct cgcgcacctc
     1801 tccgtcgcgc tcgatcacga agcctgggac gtgcggcgcc tcgcggcgga cgtgctcggc
     1861 cgttacggcg agggcgccgt tccgccgctc cgagcgcgcc tcgccgtcga ggacgatccg
     1921 ctcgtgcggg aggccatcgg tcgcgcgctc gagagcatgg tgggcgctca tcgcagcccg
     1981 ctgccgaccc gggggagcta cttgccgcga tgacgccgtc tcgactcttg ccccacgccc
     2041 agctcgggac cgaagagttc cgcctgctgc gtgatctcat ctacgaacat gcggggctgc
     2101 actacgacga cgacgcgatg ttcttgttcg aacggcgcct cgtggaccga gtggaggcgc
     2161 tcggtctcga cgatttttac acgtactaca aatacctacg cttcgatccg cgcggcccgg
     2221 gagagctcga ggaggccatc gagcgcctca cgacgaaaga gacgtatttt tttcggcagg
     2281 aataccaatt gcgggcgttt cgcgatcagc tcttgcccga gctcgcccaa accaacgcgg
     2341 cgcgcaaacg gctcggggtt tggagcgcgg gctgcgcgac gggcgaggaa gcgtatacga
     2401 tcgccatcct actcctcgag tccggcttgt tccgcaattg ggatttgaag gtcgtcggca
     2461 gcgacatctg tcgcggctcg gtcacggcgg cgcgccgcgg catttatcgc gaagccgcgt
     2521 ttcgaacgac gccgcacgaa gttcgcgccc aatacttcgc gaacgtgggc gaaggcgccg
     2581 aagtcgcgcc cgacctcaag aagatctgtc atttcgggca gctcaacctg atggacggcg
     2641 cgcgcgcgct gatggtgggt caagtcgatg tgatcttttg ccgcaatgtg ctgatctact
     2701 tcgacatgaa atccagaagg cgggtcatcg atggcttcta cgagcgactc gtgccaggag
     2761 gatatctgtt gctcggacat tcggaatcac tcttgaacgt ctcgacggcg ttcgagctcg
     2821 tgcatctaag agaggacctc gtgtatagaa agccgctcgg agcctggcgc ttcaacgggc
     2881 agaggacgta aatgccgatc gaaggggtat cgccgctgaa ggttttgatc gtcgacgact
     2941 cggcgttcaa ccgccggagc atcgccgaga tcttgtcgag ctccgcgagc atcgagatcg
     3001 tcggacgcgc cgccgacggc gaagaggcgc tgcgcatggt ctcgtcgctc aagcccgacg
     3061 tgatcacgct cgacctcgag atgccgaaga tggacggctt cacgttcctg cgcatcttga
     3121 tgagccggac gccggtctcg gtgatcgtga tctcgagcta cagccagaag
//
LOCUS       DATIML010000288         1833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5256079, whole genome shotgun sequence.
ACCESSION   DATIML010000288 DATIML010000000
VERSION     DATIML010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5256079"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1273)
                     /locus_tag="VLJ38_05020"
     CDS             complement(<1..1273)
                     /locus_tag="VLJ38_05020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38904.1"
                     /translation="MRLAVLAASAYANSRKLPELAGTNLDLDLLGQRLCEPDAGFSVQ
                     AFRAERGLAEAVEQVLDEVGERVGSLLFFFSGYALLADERGPALLLDGERLGAFSLKR
                     VKRLLAERSERALVVLDTVSAFDDATSETAALAILRDALHEPGSPVHLILSHRRAAIP
                     DERSPFTNLLELVLDWQSARNTPLGAEELFSVLRAEESLFAALGAAEYVAGSAPFDVL
                     VGNRALGASIPPAPLVSEAPPPEPALEPANAEERERSLAASTRAEERGDYPLALRELQ
                     SALRADPRDVKALGRALVLSELCEKPDLRWNAACVLELFGGANESELELCAAHRPDGL
                     LPAQGVISEGDWLAHRLEPELDERDLTLVRAFGEAGVEVALDTARRKHRGSTLTPATE
                     QDPEKSTTMLARTLVWTARLLGLPRPRLHVLE"
     gene            1527..>1833
                     /locus_tag="VLJ38_05025"
     CDS             1527..>1833
                     /locus_tag="VLJ38_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38905.1"
                     /translation="MSERTPTVTLSALIASITAVGQAARVGCRVLAYRESVPLGSSGA
                     FVALVGEGRSFQIGLLSDPLGWQSLDALAHEGTPELADAHVASRLVTLAARALRASVP
                     "
BASE COUNT          275 a          611 c          655 g          292 t
ORIGIN      
        1 tctcgaggac gtgcaggcgc ggtcgcggca ggccgagcag ccgcgcggtc cacacgagcg
       61 tgcgcgcgag catcgtggtg ctcttctccg gatcttgttc cgtcgccggc gtcagcgtcg
      121 agccgcggtg cttgcggcgt gcggtgtcga gcgcgacctc gacgcccgct tcgccgaatg
      181 cgcgcacgag cgtgaggtcg cgttcgtcga gctccggttc caagcggtga gcgagccaat
      241 cgccttcact gatgacgccc tgtgcgggca agagcccgtc gggccggtgc gcggcgcaga
      301 gttcgagctc gctttcgttc gcgccgccga agagctcgag cacgcacgcg gcgttccagc
      361 gcagatcggg tttctcgcag agctcagaga gcacgagcgc gcgcccgagc gcttttacgt
      421 cgcgcggatc ggcgcggagc gcgctttgga gctcgcgcag cgccagggga tagtcaccgc
      481 gctcctcggc gcgcgtgctc gcggcgagtg agcgctcgcg ctcttcggcg ttcgctggct
      541 cgagcgcggg ttcgggcggc ggcgcttcgc tgacgagggg cgcgggcgga atactcgcgc
      601 cgagcgcgcg attgccgacg agcacgtcga acggcgcaga acccgcgacg tactcggcgg
      661 cgccgagcgc cgcgaacagc gactcctcgg cgcgtaacac cgaaaagagc tcttcggcgc
      721 cgagcggcgt gttgcgcgcc gactgccagt cgagcacgag ctcgagcaga ttcgtgaacg
      781 gggaacgctc gtcggggatc gccgcgcggc gatgcgagag gatcaggtgg accggtgagc
      841 cgggctcgtg cagcgcgtcg cgcaggatcg cgagcgccgc ggtctcgctc gtagcgtcgt
      901 cgaacgcgga gacggtatcg agcacgacga gcgcacgttc gctgcgttcg gcgagcaggc
      961 gtttgactcg cttgagcgag aacgcgccga gccgctcgcc gtcgagcagg agcgccggcc
     1021 cgcgttcgtc cgcgagcagc gcgtaacccg agaagaagaa caacaaagag cccacgcgct
     1081 cgccgacttc gtcgagcact tgttcgacgg cttcggcgag cccgcgctcg gcacgaaagg
     1141 cctgcacgct gaagcctgcg tccggctcgc acaggcgctg tccgagcaga tcgaggtcga
     1201 ggttcgtgcc cgcgagctcg ggcagctttc gagagttggc gtacgcagaa gccgccagca
     1261 cggcgagtcg catgcgagaa gtcccacgtc gatagcacgg agcttggttt tcgttcgaac
     1321 gtgggttcag cgcctacatg tccgggcctc gggccgcgcc gctcttccgg caaatagccg
     1381 tcgagagtga agtctgagat ctcggaccga aatcccgctg cgcggacgca cggcgcggcg
     1441 cagcagagcc tttttggctg attttttgct ggcccgtgcg ttgcaaacag cccgaccgga
     1501 cctccgttat ccgagatcga ccgtgcatga gtgagcgaac cccgaccgtc acgctgagcg
     1561 cgctcatcgc gagcatcacc gccgtggggc aggctgctcg cgtcggctgt cgcgtgctcg
     1621 cctaccgcga gtcggtaccg ctcgggtctt ccggcgcctt cgtggcgctc gtcggtgaag
     1681 gtcggtcgtt ccaaatcggg ctcttgtccg atccactcgg ctggcagtcg ctcgacgcgc
     1741 tcgcgcacga aggcacgccc gagctcgcgg acgctcacgt ggcatccagg ctcgtgacgc
     1801 tcgcagcgcg cgcgctacga gccagtgtgc ctg
//
LOCUS       DATIML010000289         3017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_636608, whole genome shotgun sequence.
ACCESSION   DATIML010000289 DATIML010000000
VERSION     DATIML010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3017
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636608"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..1120)
                     /locus_tag="VLJ38_05030"
     CDS             complement(131..1120)
                     /locus_tag="VLJ38_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38906.1"
                     /translation="MKLSSSLGIACFVTALSNAALAAPIFAPAPPTRPHLKAYGDWAA
                     LWWQWAVGTPAANNPVLDTTGANCAVNQPVPGVFFLAGSFSSGTIQRSCTVPVGTSFL
                     IPMLNDAYFAQQTDPPAQRTEAFVRSQVTCVEQSPNLALSVDGVALANPKSYLEKSTL
                     FSVNLPPDNVFGVPPQLLSPSADEGYYGFVEPLTPGAHTVHIASSSGCGVTEDVTYTL
                     NVQGTVGTPITCAGSQQIVLNNADIQTTGAAITVAGNCNITINNSVLWGGTAGIVIHD
                     QGHVVVNGSVVGGGSAFVADGHGHGEYRNSAVISPVTVTQFAVVSNSGGNVAF"
     gene            complement(1366..1950)
                     /locus_tag="VLJ38_05035"
     CDS             complement(1366..1950)
                     /locus_tag="VLJ38_05035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38907.1"
                     /translation="MPDVISPAPTARSKCRGCGRTIEKGALRFGESEANPFGEGETQR
                     WFHLECAALKRPERFGPALDAADDVPERDALRGLVQSGLEHPRVVRLLRAERAPSARA
                     HCRHCREIIEKGALRIALEIWEDGRFSPMGSVHARCAPSYFETRELMPRIERTTPDLT
                     PVDRDALEEMIHTAPDVPYVPREDEGSPPAGEAG"
     gene            complement(1984..2826)
                     /locus_tag="VLJ38_05040"
     CDS             complement(1984..2826)
                     /locus_tag="VLJ38_05040"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU38908.1"
                     /translation="MKAEIGWQDAAGRRWAELQERTDAQLGPLGRAALERVNPRPGER
                     ALDVGCGAGQSTLELAELVGPRGSVVGVDVSEPLLARAKERVSAAGFENVELMLGNAA
                     SARVEPPVDLIFSRFGVMFFEEPVAAFTHLRETLVPNGRLGFVCWQPLEVNPWAHAPL
                     GAVRSLRPEHPLVELLQPGKPGPFAFSDADLVRRILQSAGFANIDVTPDEMDVALGGA
                     RTLAEAVDYTLQIGPAARFIADAGLEADPRVRDALSEALAPYASERGVFVAARTLLVT
                     AKRD"
BASE COUNT          527 a          981 c          998 g          511 t
ORIGIN      
        1 gcgtggccgg cgccgtaacg cgccggccac gactcgcatg acgacgcacg tcgttcagtg
       61 agtaacaaaa gcagaaaggc cggcgctcta aaacgccggc ctttcgcttt tgtacgtggc
      121 gggttcgcgc tcagaacgcg acgttgccgc ccgagttact cacgacggcg aactgcgtca
      181 ccgtgaccgg gctaatgacg gcggaattcc tgtactcgcc gtgaccgtga ccgtccgcga
      241 cgaacgccga cccgccaccg accacgctgc cgttgacgac gacgtggccc tgatcgtgaa
      301 tcacgatgcc ggccgtgccg ccccaaagca cgctgttgtt gatggtgatg ttgcaattgc
      361 cggcgaccgt gatcgcggcg cccgtcgtct gaatgtcggc gttgttcagc acgatttgct
      421 ggctacccgc gcacgtgatg ggggtcccca ccgtgccttg gacattgagc gtgtaggtca
      481 cgtcttccgt cacgccgcag ccggacgacg acgcgatgtg gacggtgtgc gcgcccggcg
      541 tgagcggttc gacgaagccg tagtaaccct cgtccgccga cgggctcaag agctgcggcg
      601 gaacgccgaa gacgttgtcg ggcggtaggt tgacggagaa gagcgtcgac ttttcgaggt
      661 agctcttggg attcgcgagc gcgaccccgt cgacgctgag cgcgaggttc ggcgactgtt
      721 ccacgcaggt gacctgcgag cgcacgaagg cttcggtgcg ctgcgcgggc ggatccgttt
      781 gctgcgcgaa gtaagcgtcg ttcagcatcg gaatcaaaaa tgacgtgcct accggcaccg
      841 tgcaggagcg ctggatcgtc ccgctcgaaa aactgcctgc gaggaagaag acaccgggaa
      901 ccggctgatt caccgcgcaa ttagcacctg tggtgtcgag caccggattg ttggccgcgg
      961 gggtgccgac ggcccattgc caccaaagtg cggcccagtc tccataggcc ttgaggtgcg
     1021 gccgcgtcgg cggcgcaggc gcaaaaatgg gcgccgcgag tgcggcattc gaaagcgcgg
     1081 tgacgaagca tgcgatcccg aggctgctcg acaatttcat gaatgaccct cttgttgctc
     1141 gtatggtgaa acggtcgtgc cccctgcgag cacgacgcac tctcgctaca cctcaccgcc
     1201 attggtggca atacaagttt gtgtagcagt gatgtgaaca atcgactgca cgcgagcaaa
     1261 gctgttcgtc caggaatcgc cgaaagacgg tgaacgcgag cttagaaatt cgagtgcgtt
     1321 cgccgcacac gcgtgcacgc gtcgcacctg gcgccgagcg ccgcgtcagc ccgcttcgcc
     1381 ggcgggtggc gagccttcgt cctcgcgtgg aacgtaaggc acgtccggag cggtgtggat
     1441 catctcctcg agcgcgtcac gatcaacggg tgtcaaatcg ggagtcgtgc gttcgatgcg
     1501 cggcatgagc tcgcgtgttt cgaaatacga tggggcacag cgtgcgtgca ccgagcccat
     1561 cggcgagaac cggccgtctt cccagatttc gagcgcgatg cgcagcgcgc ctttttcgat
     1621 gatttcgcgg cagtggcggc agtgcgcgcg agcggacggc gctcgttcgg cgcgcaatag
     1681 acgcacgacg cgcggatgct cgagccccga ttggacgagg ccgcgcagcg cgtcccgttc
     1741 gggcacgtcg tcggcggcat cgagcgcagg gccgaagcgc tccgggcgtt tgagcgccgc
     1801 gcattcgagg tggaaccagc gctgcgtctc gccctcgccg aacggattcg cttcggactc
     1861 gccgaaacgg agcgcgccct tttcgatcgt gcggccacag ccgcgacatt tcgagcgagc
     1921 ggtcggagcg ggagagataa cgtcgggcat cggccgtagt ttaatcccgt aagcgcacgc
     1981 gactcaatcg cgcttcgccg tcacgagcag cgtccgcgcc gctacgaaaa cgccacgctc
     2041 gctcgcataa ggcgcgagcg cttcgctcaa ggcgtcacgc acgcgcggat ccgcttcgag
     2101 cccggcgtcg gcaatgaagc gtgccgctgg gccaatctgc agcgtgtaat cgaccgcttc
     2161 ggcgagcgtg cgggcgccac cgagggccac gtccatttca tcgggcgtca cgtcgatgtt
     2221 cgcaaatccc gcgctctgca gaatgcgccg caccaggtcc gcatccgaga acgcgaacgg
     2281 ccccggcttt cccggttgaa gcagctcgac caacggatgc tcggggcgga ggctccgcac
     2341 ggccccaagc ggcgcgtgag cccagggatt tacctcgagc ggctgccagc acacgaatcc
     2401 gagccgaccg ttcggcacga gcgtctcgcg caagtgcgtg aacgccgcca cgggctcctc
     2461 gaagaacatc acgccaaagc gggagaatat caaatcgacc ggcggctcga cacgcgcgct
     2521 cgccgcattc ccgagcatga gctccacgtt ctcgaatcct gcggcgctca cgcgttcctt
     2581 ggcgcgcgcg aggagcggct ccgacacatc gacgccgacg acactgcccc gcggtccgac
     2641 gagctcagcg agctcgagcg tcgactgtcc ggccccacag cccacgtcga gggcgcgttc
     2701 ccccggcctc gggttcaccc gttcgagcgc ggcgcgcccg agcggcccga gctgcgcgtc
     2761 cgtgcgctct tgcagctccg cccagcgccg tcccgctgcg tcttgccagc cgatttcagc
     2821 cttcatgctg gaaaacatgc tcctcggtgc ccacgctgtc gattgattga tgagccgagc
     2881 cgtgcgtccc cattcacctg gttgaatggg aggccgtcga tgagaaaaga gctgacgctg
     2941 ctaagtacgc tggggttcgt gtgggcgctg aatctcggtg cttgcgcggg gccggagctg
     3001 ctcgtggggg cgaacgc
//
LOCUS       DATIML010000290         1735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_347337, whole genome shotgun sequence.
ACCESSION   DATIML010000290 DATIML010000000
VERSION     DATIML010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347337"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..749
                     /locus_tag="VLJ38_05045"
     CDS             60..749
                     /locus_tag="VLJ38_05045"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HSU38909.1"
                     /translation="MRRTLAARSAVATSALALVLLTLSIGLIFFWAPTDADQGFSQRI
                     FYFHVPIALTAYVCFGWGAWKALRVLWKRDERADVESYVAIHQGVVFGALTLLTGSIW
                     ARASWGVWWSWSENQLVLFLVLFLFYCAYFMLRFSLEPGRSRANMSAVYALFGVVLIP
                     VSFLAIRLSQKFIHPVVFNSHGPQMSGSQFVTFLVSLAGMLALFATLYQVELAGKRLD
                     ANLRELRELIA"
     gene            746..907
                     /locus_tag="VLJ38_05050"
     CDS             746..907
                     /locus_tag="VLJ38_05050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38910.1"
                     /translation="MTGDTPSEWQYVAAAYLVVFVTVLLWVAIIAAKLQRLQREVGAM
                     VESARKTHG"
     gene            900..1661
                     /gene="ccsA"
                     /locus_tag="VLJ38_05055"
     CDS             900..1661
                     /gene="ccsA"
                     /locus_tag="VLJ38_05055"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HSU38911.1"
                     /translation="MVEALFWPALLAYGEAAFAYAWPRSSRAATWGVRIGWLAQTALL
                     IVQAARTDGFPWSTWAGSLNLFVWLVVGAYLIWGCRPRFRLLGLAVMPLAAILFIVAR
                     VGGGTGAGESSDYGNLFLVLHVGLVLAAFAGFTLAAGLAGLYLWQESRLKRRAADILR
                     LRLPPLASLERLTWRTIAVSLPLLTLGLAAGVIRQRRDGGSLDALEVVTLLTWLVYSA
                     FLVSRPSGRRAAYLALGGFVLVIVVRLALAGSHFT"
BASE COUNT          187 a          607 c          581 g          360 t
ORIGIN      
        1 tgggcgatgt tcgagtacgt cgtcgccgag gtctgagccg ccggtctacc attccccgcg
       61 tgagacgcac ccttgcggca cggagcgcgg ttgccacgag tgcgctcgcg ctcgtcctcc
      121 tgacactttc gatcggcctg atcttcttct gggcgcccac cgacgccgat caggggttct
      181 cgcagcgcat cttctacttc catgtaccga tcgcgctgac cgcgtacgtc tgcttcggct
      241 ggggcgcgtg gaaggccctg cgggtgctct ggaagcgtga cgagcgcgca gatgtcgaga
      301 gctacgttgc gatccaccag ggtgtcgtct tcggcgcgct gacgctgctc acgggctcga
      361 tctgggcgcg cgcctcgtgg ggtgtctggt ggtcgtggag cgagaaccag ctcgtgctct
      421 tcctcgtgct ctttctcttc tactgcgcgt atttcatgct gcggttctcg ctcgagcccg
      481 gccggtcgcg cgcgaacatg tcggcggtct acgcgctctt cggcgtggtc ttgatcccgg
      541 tctcgtttct cgcgatcagg ctctcgcaga agttcatcca tccggtcgtc ttcaactcac
      601 acggcccgca gatgtcgggc tcgcagttcg tgacgttcct cgtctcgctg gccgggatgc
      661 tcgcgctctt cgcgacgctg taccaggtcg agctcgccgg caagcggctc gatgcgaacc
      721 tgcgcgagtt gcgcgagctg atcgcatgac gggagacacg ccgtccgagt ggcagtacgt
      781 cgcagccgcg tacctcgtgg tcttcgtgac ggtcctgctc tgggtggcga tcatcgccgc
      841 gaagctgcag cggttgcagc gcgaggtcgg tgccatggtc gagagcgctc gcaagacgca
      901 tggttgaggc gctcttctgg ccggcgctgc ttgcctacgg agaggcggca ttcgcctacg
      961 cgtggccacg tagctcgcgc gcagcgacgt ggggcgtgcg gatcggctgg ctggcgcaga
     1021 ccgcgctgct catcgtgcag gccgcacgca cggacggctt cccctggtcg acctgggcgg
     1081 gctcgctcaa cctcttcgtc tggctggtcg tcggcgccta cctgatctgg ggctgccgtc
     1141 cgcgcttccg gctgctcggg ctggcggtga tgccactggc cgcgattctc ttcatcgttg
     1201 cgcgagtcgg cggcggcacc ggcgccggtg agagctccga ctacggcaac ctcttcctcg
     1261 tgctgcacgt cggtctcgtg ctcgccgcct ttgccggctt cacgctcgcg gcgggtctcg
     1321 ccgggctcta tctctggcaa gagtcgcggc tgaagcggcg cgccgcggac atcctgcgcc
     1381 tgcggctgcc gccgctcgca tccctcgagc gcctgacctg gcgcacgatc gccgtttcgc
     1441 tgccgctcct gacgctcggc ctcgccgccg gtgtcatccg ccagcgccgc gacggcggct
     1501 cgctcgacgc actcgaggtg gtgacgctgc tcacctggct cgtctactcg gcgttcctcg
     1561 tctcgcggcc ctccggtcgc cgcgcggcgt acctcgcgct cggcggcttc gtgctcgtga
     1621 tcgtcgtgcg gctcgcgctc gcggggagcc acttcacgtg acgctcgccc tcgtcggcct
     1681 gtcgcatcac gtcgcacccg tcgagcttcg cgagcgggtg acgctcgacc tgccg
//
LOCUS       DATIML010000291         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3811600, whole genome shotgun sequence.
ACCESSION   DATIML010000291 DATIML010000000
VERSION     DATIML010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3811600"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VLJ38_05060"
     CDS             complement(<1..722)
                     /locus_tag="VLJ38_05060"
                     /inference="COORDINATES: protein motif:HMM:NF024985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4139 domain-containing protein"
                     /protein_id="HSU38912.1"
                     /translation="MTKMSRKFTIGPWLLLVLAAGATGCASARAVTPPIHTEAALGRV
                     VVYRNGVAYFERRAIVKGNELTLEVPGQRLDDFLKSLTIEDVRSGKLVPISFPTLDDQ
                     DDEVKIRLELPKDGTYELKITYVTESPSWKPSYRLELHGKEPAKLEAWAVVHNVSGED
                     WKHVAIGVGSTSALSFKYDLRSVHFVDRETLTDETALGVAPPTGGTPYQVAKKEVELL
                     GAVKRVVPELSRAAVVEEMSERA"
     gene            complement(769..1377)
                     /locus_tag="VLJ38_05065"
     CDS             complement(769..1377)
                     /locus_tag="VLJ38_05065"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HSU38913.1"
                     /translation="MLLEINPFGPEPRKIRRAVDALVAGEVIGYPTDTVYGLGCDMFN
                     KKALNRLYQIKGMERTQMLAFVCRDMTEISKYAVMHDRVFKVLRKYLPGPYCFILEAT
                     HDVPRAVQGHRKTVGVRIPNHPVALALVEGLGHPIVSSTAARHGETPHIDARELDVEF
                     PGLALVLDCGPGGTDPTTVVDLTGQQPVIIRAGAGDTAPFEH"
     gene            complement(1407..>1619)
                     /locus_tag="VLJ38_05070"
     CDS             complement(1407..>1619)
                     /locus_tag="VLJ38_05070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38914.1"
                     /translation="IRVTLHEDERGTPRVLFVINATPETIDAKVAAAGAFEAEDVLDG
                     ARFRANVGSFELPVAARSVRMLELRT"
BASE COUNT          276 a          538 c          515 g          290 t
ORIGIN      
        1 gcgcgctccg acatctcctc gaccacggca gcccgtgaga gctcgggcac gacgcgtttg
       61 acggcgccga gcagctcgac ctccttcttc gcaacttgat aaggcgtgcc gcccgtcggc
      121 ggcgcgacgc cgagcgccgt ctcgtccgtg agcgtctcgc gatcgacgaa gtgaacgctg
      181 cgcaaatcgt acttgaacga cagcgccgac gtggagccga caccgatcgc gacgtgcttc
      241 cagtcctcgc ccgacacgtt gtgcacgacc gcccaagctt cgagcttcgc gggctccttg
      301 ccgtgcagct cgagtcgata gctcggcttc caggacgggc tctccgtcac gtacgtgatc
      361 ttgagctcgt acgtgccgtc cttcggcagc tcgagccgaa tcttcacttc gtcgtcctga
      421 tcgtcgagcg tcggaaacga aatcgggacg agcttgccgc tccgaacgtc ttcgatcgtg
      481 agcgacttca agaagtcatc gagccgctgc ccaggcacct cgagcgtgag ctcgttgccc
      541 ttcacgatcg cgcgccgctc gaaatacgcg acgccgttcc gatacacgac gacgcgcccg
      601 agcgcggctt ccgtatgaat cggcggcgtc acggcgcgcg cggaggcgca ccctgtcgca
      661 cccgccgcca aaaccagcaa gagccaagga ccgatcgtga atttgcgcga catcttcgtc
      721 atcctccgta cggagaacgc gcgccgcggc ttcccgctta caccgcaatc aatgctcgaa
      781 cggcgccgta tctcccgcac cagcgcgaat gatgacgggc tgctgcccgg tgagatcgac
      841 gacggtcgtg gggtcggtgc cccccgggcc gcagtcgagc accagggcga gacccgggaa
      901 ctccacgtcg agctcgcgcg cgtcgatgtg cggcgtctcg ccgtgacgcg ccgccgtgct
      961 cgacacgatc ggatggccta ggccctcgac gagcgcgagc gcaaccgggt ggttcgggat
     1021 gcgcacgccg accgtctttc ggtgtccctg aaccgcgcgc ggcacgtcgt gcgtcgcttc
     1081 caggatgaag cagtagggcc ccggcaggta tttgcgcagc accttgaaca cgcgatcgtg
     1141 catcaccgcg tatttcgaga tttcggtcat gtcgcggcag acgaacgcga gcatttgcgt
     1201 gcgctccatg cccttgattt ggtacaggcg attgagcgcc ttcttgttga acatgtcgca
     1261 gccgaggccg tagacggtgt ccgtcgggta gccgatgacc tcgcccgcca cgagcgcgtc
     1321 gacggcccga cggattttac gaggctcggg cccgaacgga ttgatctcga gcagcatgca
     1381 atttttattt ttaggggggt cgagacttaa gttctgagct cgagcatgcg aacgctgcgg
     1441 gcagcgacgg gcagctcgaa cgacccgacg ttagcgcgga agcgcgcgcc gtctagcacg
     1501 tcctcggcct cgaatgcgcc ggcggcggcg accttcgcat cgatggtttc gggcgtggcg
     1561 ttgatgacga agagcacgcg cggagtgccg cgctcgtctt cgtgcaacgt gacgcgaat
//
LOCUS       DATIML010000292         1758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2657420, whole genome shotgun sequence.
ACCESSION   DATIML010000292 DATIML010000000
VERSION     DATIML010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2657420"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1360)
                     /locus_tag="VLJ38_05075"
     CDS             complement(<1..1360)
                     /locus_tag="VLJ38_05075"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HSU38915.1"
                     /translation="MDDAVPREHTLDDLPELIREAGVNKVLLVTGPSARHVELVRQLL
                     APIELELFAGARRHVPEDVVAEAGRVLDASGAGVIVALGGGSAIGLGKALVASRALPF
                     IALPTTYSGSERTSLFGTTKDGKKTTGRDPKVRPLHVIYDARLTADMPKSLMVTSLLN
                     ALAHPLGALASNALADEARARALRAVTLVFGALSLLLENPSGARARAQAQRGAALAAD
                     VLEGAKLGTHHALAHRLGGACDLEHGALHSVLLPHSVQRMRDETPELLAGIEAELHVL
                     DFEALLFDVLVRAGVPTSLKALGVSLAALEQVLKATAEPDRALLRAAFHGRRPSRALR
                     VEDFGLPELVAFTGPPLKDARRVVVALHGRGATAESVIRRVLEIAGSDPTLAVVAPQA
                     TELAWYAAKYTSPRSEIGPALVNALEQAGTVLERVLAECAPERVCLFGFSQGACLALE
                     YVV"
     gene            complement(1433..>1758)
                     /locus_tag="VLJ38_05080"
     CDS             complement(1433..>1758)
                     /locus_tag="VLJ38_05080"
                     /inference="COORDINATES: protein motif:HMM:NF017652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0043720 - 3-keto-5-aminohexanoate cleavage
                     activity [Evidence IEA];
                     GO_process: GO:0019475 - L-lysine catabolic process to
                     acetate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HSU38916.1"
                     /translation="FVLGLKNALPARRELLEFLARELEAVLPGSTWTAAGIGRHQLTV
                     NRWSLELGGHARTGLEDNLRFDETRLATSNAELVARVATLAAEYGRTPATPAEARRLL
                     GLRPA"
BASE COUNT          260 a          615 c          629 g          254 t
ORIGIN      
        1 gcaccacgta ctcgagcgcg agacaggcgc cttgcgagaa gccgaagagg cacacgcgtt
       61 cgggtgcaca ctcggcgagg acgcgctcga gcacggtgcc ggcttgctcg agggcgttca
      121 cgagcgccgg cccgatttcg ctgcgcggcg aggtgtattt cgccgcgtac caggcgagct
      181 cggtcgcttg cggtgcgacc accgcaagtg tcggatcgct gccggcaatc tcgagcacgc
      241 gccggatcac cgattccgcc gtcgctccgc ggccgtgcag cgccacgacc acgcggcgcg
      301 cgtccttgag cggcggccca gtgaacgcga cgagctcggg cagcccgaaa tcctcgaccc
      361 tgagcgcgcg tgacggccgg cgcccgtgga acgccgcgcg caagagtgct cggtcgggtt
      421 cggcggtcgc cttcaaaacc tgctcgaggg cggcgagtga cacgccgagc gccttaagtg
      481 aagtcggcac gcccgcgcgc acgagcacgt cgaacagcag cgcttcgaag tcgagcacgt
      541 ggagctctgc ttcgatgccg gccaagagct ccggcgtttc gtcgcgcatt cgttgcaccg
      601 aatgcggcaa gagcacgctg tgcaaggcgc cgtgctcgag atcgcacgcg ccgccgagcc
      661 gatgcgcgag cgcgtggtgc gtcccgagct tcgcgccctc gagcacgtcc gcggcgagcg
      721 ccgcgccccg ttgcgcttgc gcgcgcgccc gggcgccact cgggttctcg agcaacagcg
      781 agagcgcgcc gaacacgagc gtgacggccc ggagcgctcg cgcgcgcgcc tcgtcggcga
      841 gcgcattgga cgcgagcgca ccgagcggat gcgcgagcgc gttcaagagg ctcgtcacca
      901 tgagcgactt cggcatgtcg gccgtgagtc gcgcgtcgta aatgacgtgg agcggacgga
      961 ccttggggtc gcgccccgtc gtcttcttgc cgtctttggt ggtcccgaaa agactcgtgc
     1021 gctccgagcc cgagtacgtc gtcggcagcg caatgaacgg cagcgcccga ctcgccacca
     1081 gcgccttccc gagcccgatc gccgaaccgc cgccgagcgc gacgatcacg cccgctccgc
     1141 tcgcgtcgag gacgcgtcca gcctcggcga ccacgtcttc cggcacgtgc cggcgcgcgc
     1201 ctgcgaagag ctcgagctcg atcggtgcca gcaactgccg gacgagctcg acgtgccgag
     1261 cgctcggtcc cgtgacgagc agcactttgt tcactcccgc ctcgcggatg agctcaggca
     1321 agtcgtcgag cgtgtgttcg cggggcacgg cgtcgtccat ggccgcgata ggctagtgga
     1381 tcgctgccgg cgacgcgacg cagtcggggt cccagtcgtt acggacgcgc cactaggcgg
     1441 gccgcaggcc caagagtctg cgtgcttccg cgggcgtcgc cggcgtgcgg ccatactcgg
     1501 cggcgagtgt tgcgacgcgt gcgacgagct cggcgttgct cgtcgcgagg cgcgtttcat
     1561 cgaagcggag gttgtcctcg agccccgtgc gcgcgtggcc gccgagctcg agcgaccagc
     1621 ggttgaccgt gagttgatgg cgtccgatgc cggcggcggt ccaggtcgag cccggcagca
     1681 cggcctcgag ctcgcgcgcg agaaactcga gcagctcgcg gcgcgcgggg agcgcgttct
     1741 tcagcccgag cacgaact
//
LOCUS       DATIML010000293         3204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4969537, whole genome shotgun sequence.
ACCESSION   DATIML010000293 DATIML010000000
VERSION     DATIML010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3204
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4969537"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..1256
                     /locus_tag="VLJ38_05085"
     CDS             276..1256
                     /locus_tag="VLJ38_05085"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HSU38917.1"
                     /translation="MKPRTANAAPNRSAEGGGHTIRVVAARTGLEMGTLRAWERRYGF
                     PRPERRAGSNRRLYSNADVDRLVAIQRTLEHGYRVGDVIDKSIGELDQLASGQDAAPR
                     SVSVDFAPTPLDELIELLANDRVTELEAQLRRSAAALGPRRFLTELAHPLAVSVGQAW
                     AEGRLSIRHEHLATECLVTQIRQMLATYQDIHASPLVLLATFPGELHTLPLELIALYL
                     VVTGAKPRLLGGPTPAREIAESARTLRADAVGIAVTFSEDRKQTRAHVKTLRAALEPH
                     VPLWIGGAGGVELDLGHENTRVLRSWEAIERAVVDWRERPRRKPSSRSGV"
     gene            complement(1354..1839)
                     /locus_tag="VLJ38_05090"
     CDS             complement(1354..1839)
                     /locus_tag="VLJ38_05090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38918.1"
                     /translation="MRTVTEHYRNEAHCIAWSGNVQVILSLEPPTSEVMRKIISGLEA
                     LAARCACRTGALLVINSDCPPPDEEARRYIRAELARSSMVAAAQIVEGTGFRGAAMRA
                     VLSMVQLASRAPYPMSVFGNVPEGASWLTAELAKRAGIAPDPADVVKAVIECRGRFRR
                     R"
     gene            complement(2021..>3204)
                     /locus_tag="VLJ38_05095"
     CDS             complement(2021..>3204)
                     /locus_tag="VLJ38_05095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38919.1"
                     /translation="AIEICGDVFFGHTAPIAAALTHSQGVAHDYFGQYHRERETGHLH
                     ADESALWSSQLRPEQAADAQLVVERVYTTFCAILDRLLEYAQRSAQYDTLLVDLECEF
                     RDALAPRLTSSEEPPVERSVPCDPSQSRAWQHLQDRLAELERHPFLNWLADDDEVGPR
                     DKLRGFLALWGVDLAGYKDFNELVLRYPRPRNGLERRLNRWTENLASHAALYLRDWHE
                     LEMDRLLGWDAGETIAFYFLSSETEVHRRNMARVKRQAFAHSEPLMRFWLMKALESAG
                     EPLFRRTAPLAAAIEAEHDVVLDYWGNRHHRAHAPGAATSAEIDELFLSRVMSPGQAE
                     AASEIIDTVFDNITEQFALSLDVASRQVFVKQARSLPPPRVSGIIPVAQPDAAVGRRV
                     G"
BASE COUNT          544 a         1029 c         1077 g          554 t
ORIGIN      
        1 agccgttcgt gaggacgagg ctacccagca ttgccagttt gcagatcgtg ttcgtgattc
       61 tcagcgtgtt catgcgttct ccagcgattg agggctccgg caccacagcg gcgccggttg
      121 tgttgtacag atagtgtaca aatagtgaac gtcaagcgag ctaggccggg atgtaggcgg
      181 ccccatggcg taaatatttg aaacttcagc agcttgcgga aagggcagtg tatagctatt
      241 gtacagtttg tggcctgctt gccgggccgc tccgcatgaa accccgaaca gcgaatgccg
      301 cgccgaacag gtctgccgag ggcggtgggc acacgatccg tgtcgtcgcg gcacgcaccg
      361 gcctcgagat ggggacgctg cgcgcgtggg agcgccgtta cggcttcccg cgaccggagc
      421 gtcgtgccgg cagcaatcgg cgtctgtact cgaacgcaga cgtggatcgc ctcgttgcca
      481 tccagcgcac gctcgagcac ggctaccgtg tcggcgacgt catcgacaag agcatcggcg
      541 agctcgacca gctcgcaagc ggccaggacg cagctccgcg ttcggtttcg gtcgatttcg
      601 cgccgactcc cctggacgag ctcatcgagc tcttggcgaa cgatcgagtg accgagctcg
      661 aagcgcagct acggcgttcg gctgcggcgc tcggtccgcg gcgcttcctg acagagctcg
      721 cgcatccgct ggcagtgagc gtgggccagg cttgggccga agggcggctg tcgatccgac
      781 acgagcacct cgcgacggaa tgcctcgtga cccagatccg ccagatgctc gcgacgtatc
      841 aggatatcca cgcgagcccg ctcgtgcttc tcgccacatt tccgggcgag ctgcacacac
      901 tgcctctcga gctcatcgcg ctgtatctgg tcgttaccgg tgccaagcct cgtctgctcg
      961 gcggtcctac accggcgcgc gagatcgccg agagcgctcg cacgttgcgc gcggacgccg
     1021 tcggcatcgc cgtgacgttc agtgaggatc gcaagcagac ccgcgcgcac gtgaagacgt
     1081 tgcgggccgc cctcgagcct cacgtcccgc tgtggattgg aggcgccggc ggcgtggagc
     1141 tggatctcgg ccacgagaac acgcgtgtcc tcaggtcgtg ggaggcgatc gaacgcgccg
     1201 tggtcgattg gcgcgagcgc ccgcggcgga agccgtcctc gcggtccggc gtgtgaacgg
     1261 cgcggcgctc cgcttgtcgt cagtgactcc ccccggtcgc agcgcttgtc ggggcactta
     1321 gagagggggc gggcgagcgt gagcgggtcc ggctcagcgc cggcgaaagc ggccgcgaca
     1381 ttcgatcacg gctttgacca cgtcggccgg atctggcgcg atgccagcgc gcttcgcgag
     1441 ctcggcggtg agccaactcg ccccttcggg cacgttgcca aacaccgaca tggggtaggg
     1501 ggcgcgtgag gcgagctgaa ccatcgagag aaccgcgcgc attgccgcgc ctcggaaccc
     1561 ggtgccctcg acgatctggg ccgcagcgac cattgacgag cgcgcgagct ccgctcgaat
     1621 gtagcgccgc gcctcttcgt ccggcggtgg gcagtcgctg ttgatgacga gcagcgcgcc
     1681 cgtgcggcac gcacagcgcg ccgccagggc ttcgagcccg ctgatgatct tgcgcatcac
     1741 ttcgctcgtc ggaggctcga gcgaaagaat cacctgaacg ttacccgacc acgcgatgca
     1801 gtgcgcctcg ttccgatagt gttcggtcac ggtcctcacg aagggagctg atgggcgagc
     1861 aactgctgtc ggcgcgagct tcggcatgag agcggttcga tctaactccg ccgcactagc
     1921 agtgtgaagt tcaaactcga actctcgact caatcggtgg gaggaagcat gacagctggc
     1981 tgccgccccc tacctcgtcc actgcacgcg tggagcgcag tcagcccacg cgtcgcccga
     2041 cggcggcgtc gggctgagcc actggaatta ttccagaaac acgaggcggc ggcagtgagc
     2101 gtgcctgctt cacgaagacc tggcgggagg ccacgtcgag cgacagcgca aactgttcgg
     2161 tgatgttgtc gaagaccgtg tcgatgattt cactcgccgc ctccgcctgt cccggcgaca
     2221 tcactcgact caagaagagc tcgtcgatct cggcgctcgt cgccgcgccg ggcgcgtggg
     2281 cgcggtggtg gcggtttccc caatagtcga gcacgacgtc gtgctccgct tcgatcgcgg
     2341 ccgcgagcgg cgccgtgcga cgaaagagag gctcgccggc gctctcgagc gccttcatca
     2401 accagaagcg catcagaggc tcgctgtgcg caaacgcctg gcgcttcacg cgcgccatgt
     2461 tgcggcggtg tacctccgtc tcgctgctca agaaatagaa cgcaatggtc tcccctgcgt
     2521 cccagccgag gaggcgatcc atctcgagtt cgtgccaatc cctgaggtac agcgccgcgt
     2581 gagacgcgag gttctcggtc caacgattga gcctacgctc caagccgttt cgcggccgcg
     2641 ggtagcgcag gacgagttcg ttgaagtcct tgtagccggc aaggtcgacg ccccagagcg
     2701 cgagaaagcc gcggagtttg tcgcggggac cgacctcgtc gtcgtcggcg agccagttca
     2761 ggaacgggtg ccgttcgagt tccgccaggc ggtcttgcag atgctgccac gctcgagatt
     2821 gactcggatc gcatggaacg ctccgttcga ctgggggctc ttccgagctc gtgagccgcg
     2881 gagcgagggc gtcccgaaac tcgcattcga gatcgacgag tagcgtgtcg tactgggccg
     2941 accgctgcgc atactcgagc agacgatcga ggatagcgca gaacgtcgtg tacacgcgct
     3001 cgacgacgag ctgagcatcc gccgcctgct cgggccgcaa ctgcgacgac cagagtgccg
     3061 actcgtcggc gtgcaagtgg cccgtttcgc gctcgcggtg gtactggccg aagtaatcgt
     3121 gcgcgacccc ctgggagtgc gtgagcgcgg cggcgatcgg cgccgtatgc ccgaagaaaa
     3181 cgtcaccgca gatttcgatc gctt
//
LOCUS       DATIML010000294        10260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4389880, whole genome shotgun sequence.
ACCESSION   DATIML010000294 DATIML010000000
VERSION     DATIML010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10260
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4389880"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..1505
                     /locus_tag="VLJ38_05100"
     CDS             180..1505
                     /locus_tag="VLJ38_05100"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38920.1"
                     /translation="MTVANPLFGTVVAERYQVMERIGSGGMGAVYLCRHVSLGQKVAI
                     KFIHPELSTSEEVRRRFDTEAKAAAAIKSRHAVSVIDHGVADNGQPFIVMEYLEGQSL
                     EQALRERGRLPLDEVIEIVVQVARALEQAHAAGIVHRDLKPDNIFLARDAEGSRFGFI
                     VKVLDFGIAKVVHDDKVGGVGTTKTGMVLGTPLFMSPEALTASAPVSPASDIWSLGAC
                     AFAAACGRVPFEGEAIGDVVLKVCAAPMPVPSELVPELPRSFDGWFAKACARDMRQRF
                     RRVGEMADALRRLDEWWRAQQERSLYEIRPIGSMVDIQEALALDAPRTSSRGLVLGGM
                     LAGIALTIGALGYYVLQRTRAADETARAAAARESALIEADNARKLHDAERQFRSPEIA
                     ADARLSVDAGSPDGVRGKRRRRQATPVESPDPRKVQAVEPSARPGPSAL"
     gene            1537..2094
                     /gene="frr"
                     /locus_tag="VLJ38_05105"
     CDS             1537..2094
                     /gene="frr"
                     /locus_tag="VLJ38_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HSU38921.1"
                     /translation="MIDDVLSELKQGIEKAKDALRRDLANLRTGRAHPGMLETLRVDY
                     YGQSTPISQMANVNVPEPRMLTVKPWDKSQVKAIEKAIRESDLGLNPQVDSELIRIPI
                     PALSEERRRDLVKIAKKNGEECKVAVRKSRHEALDMLSEIEKDGGASKDDVDRGKKKA
                     EEIVAEAGTAVDQIVQQKEKEILAI"
     gene            2339..3232
                     /locus_tag="VLJ38_05110"
     CDS             2339..3232
                     /locus_tag="VLJ38_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HSU38922.1"
                     /translation="MRATAAGISDVGLQRDHNEDSFAILKEHRLFIVADGMGGHRAGD
                     VASRLATESIVDFFRAAANEGYTWPFPFDTRLSDEENRLLCGIRIANRQIIERSTRSR
                     ECQGMGTTVVGCLFSASKGKMFIGHVGDSRAYRVRNQQIQLMTRDHSLVNDYLLAMPE
                     LTEEQRSELPKNVITRALGMQEQVAVDIQGDDAIAGDCYVLCSDGLSGMVEDREILEV
                     VSGTADLEVACRRLVALANEHGGEDNITALIVRVEAQAEGEISLSDTLPTPLTIRPRD
                     GLDGQADTPPAGAVGAPTKSS"
     gene            complement(3289..3837)
                     /locus_tag="VLJ38_05115"
     CDS             complement(3289..3837)
                     /locus_tag="VLJ38_05115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38923.1"
                     /translation="MSLSALSCSDPPPTPAAGGVVVKLSPPSATVSQGRGCNAGTSGA
                     FTYMIGQPNPGKTIEDGTKGVTVSCTIKANGDFDASIKGTDSNGKKPVSFSFTGTMTD
                     QTTPANNSSAMTFFSPDTSHLYTLAGFPMCTVGPVVTYKAGAMLTDIDCPLIGSPDDS
                     VSGCEVHGTIAFEYCKTGEEQN"
     gene            complement(3966..5003)
                     /locus_tag="VLJ38_05120"
     CDS             complement(3966..5003)
                     /locus_tag="VLJ38_05120"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSU38924.1"
                     /translation="MQSPNLPLATLGLERREILKLLSVGSVVSAAGLLGCAETSRLGP
                     PAPAPAPIAPRPALTRDFSFLQLSDTHWGYEGPGNPEASHTLIDAVNTINASPLEPDF
                     VVFTGDLTHTTDDPALRRSRLKEFERIVSDLKVKNRFYLPGEHDAGPDGGAAFREVFG
                     ATYGAFEHEGIHFVRLDNVSANSSVGDEQLAWLASDLSRLSHATPLVLFTHRPLFKLF
                     PSWDWSTRDGERVLDLVHGFDAVTVFYGHIHQEHHVTTAGGVKHHAARSLIFPLPAPG
                     SVPKKAPLPWDPEARDHGLGYRTIAEAQGAATVTEMAFAPRTTPNNPPQSLDLIGPDR
                     DKWRQIADLDR"
     gene            5139..5705
                     /locus_tag="VLJ38_05125"
     CDS             5139..5705
                     /locus_tag="VLJ38_05125"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU38925.1"
                     /translation="MRTGYHRLHVLRESAPESPIFAASVLAELDALYDFACRLTRNTS
                     EAEDLVQDTFARAIVARAQFRPGSNLKAWLFRILRNAHLDGVRRARRVAPSGSEAADE
                     AAGADTADELLRGDLEIERLRRVVAGDIEAALAELGEEARTVVLLDLEGLTEAEIGEV
                     MGTPAGTVKSRLSRARARLRVLLAEYAR"
     gene            5702..6469
                     /locus_tag="VLJ38_05130"
     CDS             5702..6469
                     /locus_tag="VLJ38_05130"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSU38926.1"
                     /translation="MSDCSEFQSRIADARHGRLAPEARVALARHLEGCAECRAFDERE
                     RELDRALARLPRRKAPEALRARLAGSAPAARAPFSRRTLALGAGAALAASVALGAGFL
                     YSTRQADGLVLEAVNDHLRVLYAAQPLEIESGGIHQVKPWFEGKLDFAPVLGFDGDAE
                     FTLTGGSVAYFIDRKAAAFVFKRRLHLITLFVFRAEGLAWPHGSNQKLGRRSALAAHS
                     RGFNVLLFRDNDLGYALVSDTEPATLVHLGEKIASTL"
     gene            complement(6501..7919)
                     /locus_tag="VLJ38_05135"
     CDS             complement(6501..7919)
                     /locus_tag="VLJ38_05135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38927.1"
                     /translation="MLGRGLLVLAFAGAKLDALWGKRPLHSGDQFWWDQIGRLSLGDR
                     GFWLAERPFTVPLLHKLAGFSEPRVILLQGLLDVLAWVTLAHVVSRLIRPLGPKLFAF
                     GLLLGLGLTSGVQGWNAVMRSESASNSFLVLTLAAMLATLHAGLRQSAKAHETSCEPR
                     THRSTLAWAGLTLTSAVLAAFARDNDAYALVLVSLFAPLGLLAAGLRPRAARRELLAA
                     LTLSGGLLLIAAAARTNAEAARRYEWPLMNVIFQRVLPSRAHTAYFEHELGMPISPAL
                     LGRKRRFMSADGWYAAKAPELAPFRDWLLTRGYAGYQRYLLAHLAPTTRAAWQNFANV
                     AGDVENRHTKRTANALSWDLDRLLVDPWAMSPGLSVLALTTLGILGLLVPLAEFRLLS
                     AFSLLCLSLALTQAYVCYHADAMEVARHSVNVGLCLRLSGATTLAALTWFAVLAAAKR
                     TGNASATPGVDLGGLGRKSTRG"
     gene            complement(7967..8824)
                     /locus_tag="VLJ38_05140"
     CDS             complement(7967..8824)
                     /locus_tag="VLJ38_05140"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU38928.1"
                     /translation="MSRSTARTITEHEAREVERANETGKRPVVFVHGLWLLPSSWERW
                     ARRFEEAGYVALTPGWPDDPETTAEAKAHPEVFANKTVGHVADHFDAVLRDLKQRPAL
                     VGHSFGGLLAQILAGRGRAAVTVAISPAPFRGVLPLPFSALKSAWPVLGNPANRNRAV
                     PLTYDQFRFAFANAVSEEEARALYETYAVPAAGKPLFQAAAANLNPWTEAKVDTKNAE
                     RGPLLVVSGEKDHTVPWAIANATYKQQCENGGVTDIVEIKNRGHALTIDSGWQEVADT
                     ALAFIQRFV"
     gene            complement(9158..9233)
                     /locus_tag="VLJ38_05145"
     tRNA            complement(9158..9233)
                     /locus_tag="VLJ38_05145"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9198..9200),aa:His,seq:gtg)
     gene            complement(9324..>10260)
                     /locus_tag="VLJ38_05150"
     CDS             complement(9324..>10260)
                     /locus_tag="VLJ38_05150"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HSU38929.1"
                     /translation="ARRAVQALSGDVELVSVPARAATDDELARVHTLAYIDELGRTAG
                     KWSYFDEDTYVSPESAVAARRAAGGAVELVDALLNGRATRGVALLRPPGHHARPAGAM
                     GFCLLNNVAVAAAHARARGVERVLILDFDVHHGNGTQESFYADPSVAFVSLHQFPFYP
                     GTGSVNESGTGEGRGFTVNVPLSAGAGDDVYSAAFSRLVAPLTSEYAPKLVLLSAGFD
                     AHRADPLAEMRLSADGYGALMRTFMAALPPQTPIGMLLEGGYDLDALETSLRAALAGL
                     LLPEPAPESVSPRSDSTHASELDRALASARAFWHL"
BASE COUNT         1772 a         3319 c         3525 g         1644 t
ORIGIN      
        1 cggtccatgc cgccgatgcc tttgtggatg ttccagctga ctaccgagag ctgcatgcta
       61 tttcgtgaat accgggcgcg ccgactgtcc ggcgtcggat cctggctggt agtatcctag
      121 cgcgtgagac cggtcgcgcg cgtggcgcac gagtagggta tggaactttc ggccgtcgga
      181 tgacagtggc aaatccgctc ttcggcaccg ttgtcgcaga acgctaccag gtgatggagc
      241 ggatcggttc cggcggcatg ggggccgtct acctatgccg gcacgtgagc ctcggtcaga
      301 aggtcgccat caagttcatt caccccgagc tctcgacgag cgaggaggtc cggcgcaggt
      361 tcgacacgga ggcgaaggcc gccgccgcca tcaagagccg ccacgccgtc tccgtcatcg
      421 accacggcgt cgccgacaac gggcagccgt tcatcgtgat ggagtacctc gaggggcaat
      481 cgctcgagca ggcgctgcgg gagcggggcc gtttgcctct cgacgaggtg atcgagatcg
      541 tggtccaggt ggcgcgcgcc ctggaacagg ctcatgccgc cggcatcgtc catcgcgatc
      601 tgaagcccga caatatcttc ctcgcgcggg acgcagaggg gagtcgcttc ggcttcatcg
      661 tcaaggtgct cgacttcggc atcgccaaag tcgtgcacga cgacaaggtg ggcggcgtcg
      721 gcacgacgaa gaccggcatg gtgctcggca cgccgctttt catgagcccc gaggccttga
      781 ccgcgtcggc acccgtgagc ccagcgtccg atatctggtc gctgggggcg tgcgcattcg
      841 ccgccgcctg cggcagggtg cccttcgaag gtgaggcgat cggcgacgta gtgctcaagg
      901 tgtgcgccgc gcccatgccc gtgccgagcg agctcgtccc ggagctgccc cgctcgttcg
      961 atggttggtt tgccaaggca tgcgcgcgtg acatgcgcca gcgcttccgg cgagtcggag
     1021 agatggccga cgcgctccgc cgcctcgacg aatggtggcg cgcgcagcaa gagcgctcgc
     1081 tctacgagat tcggcccatc ggctcgatgg tcgacattca agaggcgctc gcgctcgacg
     1141 cgccgcgcac ctcgagccgc ggcctggtgc tcggcgggat gctggccggc atcgcgctga
     1201 cgattggcgc gctcggctac tacgtcctgc agcgtacccg cgccgctgac gagaccgcgc
     1261 gcgccgctgc ggcccgggag tccgcactca tcgaagcgga caatgctcgt aaactgcacg
     1321 atgccgaacg gcagttccgg tcgcccgaaa tcgccgccga cgcgcgcctg agcgtcgatg
     1381 ccggctcgcc ggacggtgtg cgcggcaagc gtcgccgacg ccaagcgacg cctgtcgaga
     1441 gcccggaccc gaggaaggtg caagctgtag agccgagcgc acgccccggc ccctccgcgc
     1501 tatgatatat ggtccgcccg cctgacgagg ccaagcatga tcgacgacgt tctctccgag
     1561 ctcaagcagg gcattgagaa agcgaaggac gccctcaggc gtgacctcgc gaacctccgg
     1621 accgggcgcg cccatccggg catgctcgag acgcttcgcg tcgactatta cgggcagagc
     1681 acaccgattt cgcagatggc gaacgtcaac gtgcccgagc cacgcatgct cacggtcaag
     1741 ccgtgggaca agtcgcaagt gaaggcgatc gagaaggcga tccgcgagag cgatctcggc
     1801 ctgaacccgc aggtcgacag cgagctcatc cgcatcccga tccccgccct cagtgaagag
     1861 cggcgccgcg acctcgtgaa gatcgcgaaa aaaaatgggg aggagtgcaa ggtcgcggtc
     1921 cgcaagtcgc gtcacgaggc gctcgacatg ctgagcgaga tcgaaaagga cggcggcgcg
     1981 agcaaggacg acgtcgaccg cggcaagaaa aaggcggagg aaatcgtcgc cgaagcgggc
     2041 acggccgtgg atcagatcgt gcagcaaaag gaaaaagaga tcctcgcgat ctgacgaagg
     2101 cgcccggggt cgagggccgg cacggcgccg ctggtaggga aaaaccaaac cgagggccgg
     2161 aactcaggct ccggaggggc ggtagcacga acctcgagct acggcggcgg caacgccgag
     2221 aacgccgccc gccgagcgag gggacaaggg cccgacttga cacgagaaag tcctcatgaa
     2281 agcgtgtggc gttgacgagc cggtgctcgg aaaacgggcc cgattcggaa ggaacgtgat
     2341 gcgcgcgaca gcggccggga tcagcgacgt ggggcttcag cgcgaccaca atgaggacag
     2401 cttcgcgatc ctcaaagagc atcgcctgtt catcgttgct gacggcatgg gtggtcatcg
     2461 cgcgggtgac gtggcgagcc gcctcgcgac cgaatccatc gtcgactttt tccgcgcggc
     2521 cgcgaacgag ggctacacct ggccgttccc gttcgacacg cgcctttccg acgaagagaa
     2581 ccggctgctc tgcgggattc gcatcgccaa tcgccagatc atcgagcgga gcacgcgctc
     2641 ccgcgagtgc cagggcatgg gcacgaccgt cgtcggctgt ttgttcagcg cgtcgaaggg
     2701 caagatgttc atcgggcacg tcggcgacag ccgcgcttac cgcgtgcgaa accagcagat
     2761 ccagctcatg acgcgcgacc attcgctcgt caacgactac ctgctcgcga tgcccgagct
     2821 caccgaagag cagcgcagcg agctgccgaa gaacgtcatc acgcgcgccc tcggtatgca
     2881 ggagcaggtg gcggtcgaca tccagggtga cgacgcgata gccggcgact gttacgtgct
     2941 ctgctccgac gggctcagcg gcatggtcga ggatcgggag atcctggagg tcgtcagcgg
     3001 cacggcggat ctcgaggtcg cgtgccggcg cttggttgcg ctcgcgaacg agcacggcgg
     3061 ggaagacaac atcaccgccc tcatcgtgcg cgtcgaggct caggccgagg gcgagatcag
     3121 tttgtccgac acgctgccga cgcccctcac gatccgcccg cgtgacggtc tcgacgggca
     3181 ggccgatacg ccgccagccg gggcggtcgg cgctccgacg aagagcagct agcgccgcgc
     3241 gtccgtccaa gactcacgcg gtcttgtcgg gctcgggcgg agccccagct agttctgttc
     3301 ctcgcccgtc ttgcagtact cgaaggcgat ggtgccgtgc acctcgcagc cgctcaccga
     3361 atcgtccggt gagccgatga gcgggcagtc gatgtcggtg agcatggctc cagctttgta
     3421 agtcacgaca ggaccgacgg tacacatggg aaaacccgcc agcgtgtaga ggtggctcgt
     3481 atcgggcgag aagaacgtca tcgccgacga gttgtttgcc ggcgtggtct ggtccgtcat
     3541 cgtgcccgtg aacgaaaagc tgaccggttt tttcccgttc gagtcggtgc ctttgatgct
     3601 ggcatcgaag tcaccattgg ccttgatagt gcaggagacg gtcacgccct tggtgccgtc
     3661 ctcgatcgtc ttgcccgggt tcggttgccc gatcatgtac gtgaaggcgc ccgacgtgcc
     3721 ggcgttacag cctcgaccct gcgagacggt agctgacggc ggggacagct tcacgacgac
     3781 gccgcccgcc gcaggcgtcg gcggcggatc gctgcaggac agtgcggaca gtgacaacgg
     3841 aagcgctaac gagaaagaaa tagcacgatg cagcatcgag gctccaagct gggggtcttc
     3901 ggaagtgtag taccgcttga atccctcgcg caacggcgcc tcgtaactgc gtgtgtaacg
     3961 caggttcagc ggtcaagatc agcgatttgc cgccacttgt ccctgtccgg accaatcaga
     4021 tcgagcgatt gcggcggatt attcggcgtg gtgcggggcg cgaaagccat ttctgtgacc
     4081 gtcgccgcgc cctgggcctc cgcgatcgta cgatagccga gcccgtggtc gcgagcctcg
     4141 gggtcccagg ggaggggcgc tttctttggc accgagcctg gggcgggcag cgggaagatc
     4201 agtgagcgtg cggcgtgatg cttcacgcca cctgctgtcg tcacgtgatg ttcttggtgg
     4261 atatggccat agaacaccgt gacggcgtcg aagccgtgca cgaggtcgag cacgcgctcc
     4321 ccgtcgcgcg tcgaccagtc ccagctcgga aacagcttga agagcgggcg atgggtgaag
     4381 agcacgagcg gcgtcgcgtg ggaaagccgc gaaagatcgc tcgccagcca cgcgagctgc
     4441 tcgtcgccga cgctcgagtt cgccgacacg ttatcgagac ggacgaagtg aatcccttcg
     4501 tgctcgaaag ctccgtacgt cgcgccgaaa acctcgcgaa acgcggcgcc gccgtcgggc
     4561 ccggcgtcgt gttcgcccgg caagtagaag cgatttttca ccttgaggtc ggagacgatg
     4621 cgctcgaact ccttgagacg gctgcggcgc agcgcagggt catccgtcgt gtgcgtgaga
     4681 tcgcccgtga acaccacgaa atcgggctcg agcggcgacg cgttgatggt gttcacggcg
     4741 tcgatcagcg tgtgactcgc ctcgggattg ccggggccct cgtaccccca atgcgtgtcc
     4801 gatagctgca agaacgagaa atcccgcgtc aacgccggcc gcggggcaat gggcgctggc
     4861 gcgggcgctg gcggcccgag ccgcgacgtc tcggcacatc cgagcagtcc ggcggcggag
     4921 acgacgctgc cgacggagag cagcttcaaa atttcgcggc gctcgaggcc gagcgttgcg
     4981 agcgggaggt tcggagattg catgctggca gaacgacggg cagcctgatt ggttccggtg
     5041 tccgggtagg gaaccggcga gcaagcctcg gcgttgaaag ctcgagagtg aaactcacca
     5101 tggtttccgg gccgatgcga gagctgccgg tggcgcgagt gagaaccggg tatcatcgcc
     5161 tgcacgtgct gcgcgagtcg gcgcccgaga gtccgatttt tgccgcgagc gtgctcgcgg
     5221 agctcgacgc gctctatgac tttgcctgtc gactcacgcg caatacgagt gaagccgagg
     5281 atctcgtgca ggacacgttt gcgcgcgcga tcgtggcgcg tgcgcaattt cgtccggggt
     5341 cgaacctcaa ggcctggctc tttcgcatcc tgcgcaacgc tcatctggac ggtgtgcggc
     5401 gcgcgcggcg tgtcgctccg agtggctcgg aggcggccga cgaggccgcg ggcgcggaca
     5461 ccgcggacga gctcctgcgc ggcgatctcg aaatcgagcg cctgcgccgc gtcgtggcgg
     5521 gcgacatcga agcggcgctc gccgagctcg gcgaggaggc gcgaacggtc gtcctgctcg
     5581 atctggaagg cctcacggaa gcggagatcg gcgaggtgat gggcacgccc gccggcaccg
     5641 tcaaatcgcg tctttcgcgg gcgcgggctc ggctgcgcgt tttgctcgcg gagtacgcgc
     5701 ggtgagcgac tgcagcgaat ttcagagccg catcgcggat gctcggcacg gccggcttgc
     5761 ccccgaggcg cgggtcgctc tcgcgcgtca cctcgaaggc tgcgccgagt gccgcgcctt
     5821 cgatgagcgc gaacgcgagc tcgatcgggc gctcgctcgc ttgccgcgcc gcaaggcgcc
     5881 cgaggcactc cgggctcgac ttgccggttc agcgcctgcg gcgcgcgccc cattttcgcg
     5941 gcggaccctg gcgctcggcg ccggcgcggc gctcgcggcg agtgtcgccc tcggcgcggg
     6001 tttcctttat tcgacacgcc aggcggacgg gctcgtgctg gaggccgtca acgatcacct
     6061 acgcgtgctc tatgccgcgc agccgctcga aatcgagagc ggcggtatcc accaggtgaa
     6121 gccctggttc gagggcaagc tcgattttgc gcccgtgctc ggcttcgacg gcgacgcgga
     6181 gttcacgctc acgggcggct cggtcgccta cttcatcgat cgcaaggccg cggctttcgt
     6241 gttcaagcgg cgcttgcacc tcatcacgct gttcgtcttt cgcgcggagg gcctagcttg
     6301 gccgcacggc tcgaatcaga agctcgggcg ccggagcgcg ctggctgcgc attcccgcgg
     6361 cttcaacgtg ctcttgttcc gcgacaacga cctcggctac gcgctcgtct ccgacacgga
     6421 gcccgcgacg ctcgtgcacc tcggcgaaaa aatcgcgagc acgctctgag cgcggcagag
     6481 cgggtcgttc gccgactcga ctagcctcga gttgattttc ttccaagacc gcccaagtcg
     6541 acaccgggcg tggccgatgc gttgccggtg cgctttgcgg cggcgaggac ggcgaaccac
     6601 gtgagcgcgg cgagtgtggt cgcgccgctc agtcggaggc agaggcccac gttcacggaa
     6661 tggcgggcga cctccatcgc gtccgcgtga tagcaaacgt aggcttgagt cagcgccaag
     6721 ctcaaacaga gcaggctgaa cgcagacagc agtctgaatt cggcgagcgg gacgagcagg
     6781 ccgaggatcc ctagcgtcgt cagggccagg acgctcaagc cgggactcat ggcccatgga
     6841 tcgacgagca gacggtcgag atcccacgag agcgcgttcg ccgttcgttt cgtgtggcga
     6901 ttctcgacgt cgcctgccac gttggcgaag ttctgccatg ccgcgcgcgt cgtcggcgca
     6961 aggtgcgcca acagatagcg ctgataaccc gcgtagccgc gcgtgaggag ccagtcgcga
     7021 aagggagcaa gctcgggcgc tttcgccgcg taccagccgt ccgcggacat gaaacgtcgt
     7081 ttcctaccga ggagcgccgg cgagatcggc attccgagct cgtgctcgaa gtaagccgtg
     7141 tgtgcgcgtg acggcagtac gcgctgaaag atgacgttca tgagcggcca ctcgtagcgc
     7201 cgggctgcct ccgcattggt gcgcgcagcc gccgcaatga ggagtaagcc gccgctgagg
     7261 gtcagagccg cgagcaattc gcgccgggcc gcgcggggtc tcaagccagc cgccaagagc
     7321 ccgagcggcg cgaacaggct cacgagcacc agcgcgtagg catcgttgtc ccgagcaaac
     7381 gcagctaaga cggcactggt gagcgtgagt cccgcccaag ccagcgtgct ccggtgggtc
     7441 cgaggctcgc agctcgtctc gtgggctttg gcgctttgcc gtaacccagc gtggagggtc
     7501 gcgagcattg ccgccagagt gagcacgagg aacgaattcg aagccgactc gctgcgcatc
     7561 acggcgttcc agccctggac gccgctcgtg agtccgagcc cgagcagtag gccgaacgcg
     7621 aaaagcttcg gaccgagcgg tcggatcaaa cgcgagacca cgtgggcgag cgtcacccag
     7681 gccaagacgt cgagcaggcc ctgcagtagg atcacgcgcg gttcggagaa gccggcgagc
     7741 ttgtgcagca gtggcaccgt gaatggccgc tccgcgagcc agaacccccg atccccgagc
     7801 gagagccgcc cgatttgatc ccaccagaac tgatcgccgc tgtgcagcgg tcgcttgccc
     7861 cagagcgcgt cgagcttagc gcccgcgaag gcaaggacca gcagtcctcg ccccagcacg
     7921 tcggcgagcc gccgtgttcc gggtgtccct ccgcgcgaag gcgccctcac acgaagcgct
     7981 gaatgaaggc gagcgccgtg tcggctactt cctgccagcc actgtcgatc gtgagcgcat
     8041 ggccgcggtt tttgatttcg acgatgtcgg tcacgccgcc gttttcgcac tgctgcttgt
     8101 acgtggcgtt cgcgatcgcc cacggcaccg tgtgatcctt ctcgcccgag acgacgagca
     8161 gcggaccacg ttcggcgttt ttggtgtcga ctttcgcttc ggtccaagga ttcaaattag
     8221 cggccgcggc ttgaaagagc ggcttgccgg cggcaggcac ggcgtacgtc tcgtagagcg
     8281 ctctcgcttc ttcctcgctc acggcgttgg cgaatgcgaa gcggaactga tcgtaggtga
     8341 ggggcaccgc gcggtttcgg ttagccggat tgccgagcac gggccacgcg gacttgagcg
     8401 ccgagaacgg gagcggcaag acgccgcgga agggcgcggg gctgatcgcg accgtcaccg
     8461 ccgcgcggcc gcgacctgcg aggatctgcg cgagcagtcc gccgaaggaa tgcccgacca
     8521 gcgccggccg ttgcttcaag tcgcgcagca ccgcgtcgaa gtgatcggcg acgtgcccga
     8581 cggttttgtt cgcgaacacc tccggatggg cttttgcttc cgcggtcgtc tcggggtcgt
     8641 cgggccagcc cggcgtcagc gcgacgtagc ccgcctcctc gaagcgccga gcccaacgtt
     8701 cccagctgct cggcaatagc cagagcccat gcacgaacac cacgggacgt tttcccgtct
     8761 cgttcgcgcg ttccacttca cgcgcttcgt gttccgtgat cgtccgcgcg gttgacctcg
     8821 acatggggac actcctcgag cgatcgcctg atcgctccgt gcgtgatgga cctccagtat
     8881 cgcgccgtcg cccgagccag ccaacccggt tgcgagtatg acgccgcgcc ggcttcgctg
     8941 agcaggcgcc gtggcaacgc tggagcccgc tacaccgcgc ggacggactc ttccggtggg
     9001 gcgtcgtcgt gaggcaaaat gctcctgacg tcctcgtcgg tgcagggtcg tgcgtgttcc
     9061 ttcacgtctg gcgcggcgaa caccgcccga ccgtcggatg tgcggcgatg gcgcccgaac
     9121 cggttgagtc ggtgcccgac actctcgcgg agctatttgg ggtgaatgac gggactcgaa
     9181 cccgcgacaa ccggagccac agtccagtgc tctgccaact gagctacatc caccgtgttg
     9241 gccctgacgg gccgccggag tcttagcgca agaggccgcc ggcgcgcaac ctccgcaact
     9301 tctgcgaaaa aactggcaaa tgctcagagg tgccagaagg cgcgcgccga agcgagcgcg
     9361 cgatcgagct cgctcgcgtg cgtcgaatcg ctccgtggcg aaacggactc cggtgcgggc
     9421 tccgggagaa gcagtcccgc gagcgcggcg cggagcgacg tctcgagggc gtcgaggtcg
     9481 tagccgcctt cgagcagcat gccgatgggc gtctgcggcg gcagcgcggc catgaatgtc
     9541 cgcatgagcg cgccgtaacc gtcggccgag agccgcattt ctgccagcgg atcggcgcgg
     9601 tgtgcgtcga accccgcgct caagagcacg agcttcggcg cgtactcgct cgtgagcggc
     9661 gcgaccaagc gcgaaaatgc ggccgagtaa acgtcgtccc cagctccggc ggaaagcggc
     9721 acgttgacgg tgaagccgcg tccctctccc gtgcccgact cgttgacgct gcccgtgccc
     9781 gggtagaacg gaaactgatg cagcgacacg aacgcgacgc tcgggtccgc gtaaaacgat
     9841 tcctgcgtac cgttgccgtg atggacgtcg aaatccaaga tgagcacgcg ctcgacgccg
     9901 cgcgcgcgcg cgtgtgcggc cgcgacggcg acgttgttga gcaagcagaa gcccatcgcg
     9961 ccggctggtc gcgcgtggtg gcccggcgga cgcaacagcg caacgccgcg cgtggctcgt
    10021 ccgttcaaga gtgcgtccac gagctccacc gcgccgcccg ccgctcgccg cgccgcgacc
    10081 gcggactccg gcgagacgta cgtgtcctcg tcgaaatagc tccatttgcc ggccgtacgg
    10141 ccgagctcgt cgatgtatgc aagtgtgtga acgcgtgcga gctcgtcatc cgttgcagca
    10201 cgcgcgggca cggacacgag ctcgacgtcg cccgagagcg cctgaacggc gcgccgagcc
//
LOCUS       DATIML010000295         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1503440, whole genome shotgun sequence.
ACCESSION   DATIML010000295 DATIML010000000
VERSION     DATIML010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1503440"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1686)
                     /gene="asnB"
                     /locus_tag="VLJ38_05155"
     CDS             complement(<1..1686)
                     /gene="asnB"
                     /locus_tag="VLJ38_05155"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HSU38930.1"
                     /translation="MCGIAGTLGLDPELARPAADRMRAALKHRGPDDDGLEVVAGPGG
                     VIPAVLAHTRLSIVDLSPAGHQPKRDEPADSTRVPNVVTYNGEIYNHHALRPELARGG
                     WPCHSGSDTEVLLHAYRVWGVRAVERLEGMFAFCLLDTERGLAWFCRDRVGIKPLYLY
                     RPARGGLLFASEVRALLAAGDALVPRRLHAPAVESFLAQGAVMSEHAIVRGVTLLGPG
                     ESLLCDFEGKPLRQVRYWSVEFGGHDGERTLPADGSAAAPVTATNGRSTTFRSELVAE
                     LGSALRHSLSKLLLADVPVGLFLSSGVDSTAVAAIASEVTAAPLRTIAVGFDIAAWDE
                     TEAAGLSARELGTEHQRIELSGGGVLASFDDVLAAVDQPTVDGFNTYHISLAARRAGL
                     TVALSGLGGDEIFGGYRSFIDVPRALRLRRLTDVLGAKPRDSVADWLERAAASPRVDG
                     RGRALVKLGETLRRPADVVDLYLLRRELFSAAERRALQTLPQGSDASAGLEHDDLQAL
                     RRLQPERETLDRVAALEFSTYMRHMLLRDADVFSMRHGLEIRVPLLEHYAVAEA"
     gene            complement(1694..>2125)
                     /locus_tag="VLJ38_05160"
     CDS             complement(1694..>2125)
                     /locus_tag="VLJ38_05160"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU38931.1"
                     /translation="EISESELRQLVSELGLADVVGLVPFQQNAAAVYRGLDIVVHPSE
                     RPEPFGRTIVEAMATGRAVVVSRAGGAAELFVEGESALGHQPGNPSDLARAVLELARD
                     EALRARLGTAARAEAEARFDRRRLGREVLASYGELLGSRLG"
BASE COUNT          342 a          734 c          743 g          306 t
ORIGIN      
        1 cgcttcggcc acggcgtagt gttcgagcaa gggcacgcgg atttcgagtc cgtggcgcat
       61 gctgaacacg tccgcgtcgc gcaggagcat gtgccgcatg taggtcgaaa attcgagggc
      121 ggcgacgcgg tcgagcgtct cgcgctcggg ctgcaaccgg cgcagcgctt ggagatcgtc
      181 gtgctcgagc ccggcgctcg cgtcgctgcc ctgcggcaga gtttgcagcg cgcgccgctc
      241 ggccgcgctg aacagctctc gccggagcag gtacaggtct acgacgtcgg ctggacggcg
      301 cagcgtctcc ccgagtttga cgagtgcgcg tccgcgcccg tcgacgcgcg gtgacgccgc
      361 ggcgcgttcg agccaatcgg cgacactgtc gcgtggcttc gccccgagga cgtcggtcag
      421 cctgcgcaag cggagcgcac gcggcacgtc gatgaagctc cggtagccgc cgaaaatctc
      481 gtcgcccccg agtccgctga gcgccacggt gagccccgcg cgccgggcgg cgagggagat
      541 atgatacgta ttgaaaccgt cgacggtcgg ttggtcgacg gcggcgagta cgtcgtcgaa
      601 agacgcgagc acaccgccgc ccgacagctc gatccgctgg tgctcggtgc cgagctcgcg
      661 ggccgacagc cccgcggcct cggtttcgtc ccacgccgct atgtcgaagc cgacggcaat
      721 ggtgcgtagc ggcgcggccg tcacttcgga agcgatggca gcaaccgccg tagaatcgac
      781 gcccgacgag agaaacaagc cgaccggcac gtcggcgagt aacaatttcg acaaggagtg
      841 gcgcagcgcc gagccgagct ccgccacgag ctcgctgcgg aacgtcgtgc tgcgcccgtt
      901 cgtcgcggtg accggcgctg ccgccgagcc gtcggcgggc agcgtgcgct cgccgtcgtg
      961 tccgccgaac tcgaccgacc agtaacggac ctgccgcagc ggcttgcctt cgaaatcgca
     1021 gagcagcgac tcgccgggtc cgagcaacgt gacacctcgg acgatggcgt gctcgctcat
     1081 cacggcgccc tgcgccaaaa agctctccac cgccggcgcg tggagccggc gcggcacgag
     1141 ggcgtccccg gcggcgagca gcgctcgtac ctcgctcgcg aacaggagtc cgccccgtgc
     1201 gggcctgtac aagtaaagcg gcttgatccc gacgcgatca cgacaaaacc aggcgaggcc
     1261 gcgctcggta tcgagcaggc aaaacgcgaa catgccttcc aagcgctcga cggcgcgcac
     1321 gccccagacg cgatacgcgt gcaggagcac ttcagtgtcc gagcccgagt gacacggcca
     1381 gccgccgcgc gcgagctcgg gcctgagggc gtgatgattg tagatctcgc cgttgtaagt
     1441 aacgacgttg gggacgcggg tcgagtccgc tggttcgtcg cgcttgggtt ggtgcccggc
     1501 cggcgacaga tcgacgatcg aaaggcgcgt gtgcgcgagc acggcgggaa tcacgccgcc
     1561 ggggcccgcc acgacttcga gtccgtcgtc gtcggggccg cgatgtttga gcgcggcgcg
     1621 catgcgatcc gccgcgggtc gggcgagctc gggatcgagg cctagcgtgc cggcgatgcc
     1681 gcacatatgg ccgtcatcct agcctcgaac caagcagctc gccgtagctc gccaatactt
     1741 cgcggccgag gcggcgccga tcgaaacggg cttccgcttc cgctcgggcg gccgttccga
     1801 gccgagcccg gagggcttcg tcccgcgcaa gctcgagcac ggcgcgtgcg agatcactcg
     1861 ggttgcccgg ctggtggccg agcgcgcttt cgccctcgac gaacagctcg gcggctccgc
     1921 ccgcgcgtga aaccacgacg gcgcgtcccg tcgccatggc ctcgacgatc gtcctgccga
     1981 acggctccgg gcgctcgctc gggtgcacca cgatatcgag cccgcgataa accgccgccg
     2041 cattctgctg aaacggtact aggccgacga cgtcggctag gccgagctcg ctgacgagct
     2101 ggcggagttc cgactcggaa atctc
//
LOCUS       DATIML010000296         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4969972, whole genome shotgun sequence.
ACCESSION   DATIML010000296 DATIML010000000
VERSION     DATIML010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4969972"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..324)
                     /locus_tag="VLJ38_05165"
     CDS             complement(<1..324)
                     /locus_tag="VLJ38_05165"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU38932.1"
                     /translation="MSNEKPCVLLVDDDAAVRTVLAALLRQGGIEAIEAASASEALTF
                     LNDGVTDVMVTDLRMPGMDGMELLARASKTWPDVPVIMLTAHGNVPLAVEAMRQGAFE
                     FLLKPF"
     gene            complement(321..1796)
                     /locus_tag="VLJ38_05170"
     CDS             complement(321..1796)
                     /locus_tag="VLJ38_05170"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU38933.1"
                     /translation="MDRHGVMTVVACAGDLAFGALAFARRSKSTLGLLLALLFLDAFG
                     WNFASLAFELSRVSLWHAIDRAFSSVMPALALHVVVVFVGRSRSLRPLLVTTYAGFGV
                     LGLFVQSSAWLPALAVLGPTTMLFALLLLLLHRQRSTTPDERARADLVSLAILIGTFF
                     GVTELLYHEVNFPVPRLGAIGTLIAMMLLATAALRLRLLGSEVPPIVALYAFSFGVLW
                     IIAQLALVRWLDPQTGSWVLGAGVLVLILVASAREVGRFASIGRARSQELAMLGRFSE
                     QLAHDIKNPLAALKGAVQFLSEEHRLGRSLDEHVSFLKLIEQQIERVQRTIGDYQRIA
                     KVEPRPTLTSLNAIIAELLALQHFAVLPGVTFEAKLAADLPECPLDRDLVMTALENVV
                     RNACEAMPAGGTIHVRTAYERGRNRVAVLVEDEGGGMDARQLEQAAAPFFTTKALGTG
                     LGLSFAERVARAHHGTLNLSSAVGRGTRVTLSFRVLAEEGA"
BASE COUNT          374 a          606 c          620 g          284 t
ORIGIN      
        1 gaacggtttt aggaggaatt cgaaggcgcc ttggcgcatc gcctccacgg caagcgggac
       61 attgccgtgc gcggtgagca tgatcacggg cacgtccggc caggtcttgc ttgcccgcgc
      121 caagagctcc atgccgtcca tgcccggcat gcggaggtcg gtcaccatga cgtcggtcac
      181 gccgtcgttc aagaacgtga gcgcttcgct ggcgctcgcc gcttcgatcg cctcgatgcc
      241 gccttggcgt agcaaagcgg cgagtaccgt gcggacggct gcgtcatcgt cgaccaagag
      301 cacgcacggc ttttcgttac tcaagcgcct tcctcggcaa gcacgcgaaa actcagcgta
      361 acccgggtcc cgcgcccgac ggcactgctg agattcagcg tgccgtgatg ggctctcgcg
      421 acgcgttcgg caaagctcaa gccgagcccc gtgcccagcg ctttcgtcgt gaaaaacggt
      481 gccgctgcct gctcgagctg tcgcgcgtcc atgccgccgc cctcgtcctc gacgagcacg
      541 gcgacccgat tgcggccgcg ctcgtaggcc gtgcgtacgt gaatcgttcc gcccgccggc
      601 atcgcctcgc aagcattgcg cacgacgttt tcgagcgcgg tcatgaccaa gtcgcggtcg
      661 agcggacatt ccggcaaatc cgcggcgagc ttcgcctcga acgtcacgcc gggcagcacc
      721 gcgaagtgct gcagcgccag aagctcggcg atgatggcgt tgagcgaggt caaggtcgga
      781 cgcggctcca ctttagcgat acgttgatag tcgccgatcg tacgctgaac gcgctcgatt
      841 tgctgctcga tcagcttcaa aaatgacacg tgctcatcga gcgagcgacc gagtcggtgc
      901 tcctcgctca ggaattgaac cgctcctttg agcgcggcga gcggattttt gatgtcgtgc
      961 gcgagttgct cggagaagcg accgagcatc gccagctctt ggctgcgggc tcggccgatg
     1021 gaggcgaacc gtccgacctc gcgagccgag gcaacgagaa tcagcacgag cacgccggcc
     1081 ccgagcaccc aagacccggt ttgcggatcg agccagcgca ccagcgcgag ctgggcgatg
     1141 atccagagca cgccgaacga gaacgcatag agcgcaacga tcggcggcac ctcgctgccg
     1201 agcagtcgca gtctcagcgc cgcggtcgcg agcaacatca tggcaatcag cgtgccgatg
     1261 gcgccgaggc gcggaaccgg aaaattgacc tcgtggtaga ggagctcggt aacgccgaag
     1321 aacgtgccga tcaaaatggc gagcgaaacg agatcggcgc gcgctcgttc gtcgggtgtc
     1381 gtggagcgtt ggcggtgcag cagcagcaag agcagggcaa aaagcatcgt agtggggccg
     1441 agcacggcga gtgctggcaa ccaagcgctg ctttggacga acagcccgag caccccgaac
     1501 ccggcgtagg tggtcacgag cagcggtcgc agcgagcgag aacgaccgac gaacacgacg
     1561 acgacatgca acgcgagcgc cggcatcacg gacgaaaacg cgcgatcaat cgcgtgccac
     1621 aggctcacgc gcgaaagctc gaaggccagg ctcgcgaagt tccagccgaa cgcgtcgaga
     1681 aaaagcaggg cgagcagcag gccgagcgtg ctcttcgagc ggcgggcaaa cgccagcgcg
     1741 ccgaacgcga ggtcgcccgc gcacgcgacg accgtcatga cgccgtggcg gtccatcggg
     1801 tcgggatcat acctcgacga cctcgatcga ggaatgtccc ctagttcgcg acgaagttcc
     1861 tgagtgccga gtcggcgtcc tcac
//
LOCUS       DATIML010000297         3099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2080546, whole genome shotgun sequence.
ACCESSION   DATIML010000297 DATIML010000000
VERSION     DATIML010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2080546"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VLJ38_05175"
     CDS             <1..337
                     /locus_tag="VLJ38_05175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38934.1"
                     /translation="APLALDVAQLQRRIDENPRLKQSLADVKIKDAVDLLATYGASGR
                     DMQAWLAGVPINRDFSLKLEYISGLALNTGEADPIYAHMVQGHSYPAFRAHGLVDREL
                     RRRVLAGGG"
     gene            349..774
                     /locus_tag="VLJ38_05180"
     CDS             349..774
                     /locus_tag="VLJ38_05180"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU38935.1"
                     /translation="MRYLHTMLRVRDLDVALDFFVNKLGLTESRRSVNERGRFTLVFL
                     KSGDPADPAEVELTYNWDQPEPYPTGRFFGHLAYAVDDIYATCERLRAAGVDILRPPR
                     DGHMAFIKSPDGHSIELLQRGDSLPPKEPWLSLPNQGSW"
     gene            775..2700
                     /locus_tag="VLJ38_05185"
     CDS             775..2700
                     /locus_tag="VLJ38_05185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38936.1"
                     /translation="MTPSAARAPEKKKPLGVALRESLAYIARALALVWRSSRALTLAL
                     AVLTLLAAATPPAVAWAGKRIVDAVVARSREATLDWVAAELVLVVLQATLGRGLSLVR
                     AVLASRLGTDVNVAILERAVRLELRHFEDPDFYDRLTRARREASSRPVSLVTESFSLL
                     QGVLTLAGYAAILVRFSGWAVAGLLLATVPATIAEMRYSKSAFRLRNWRSPDSRRLMY
                     LEYVLANDEHAKEVKLFGLGPLFLGRYRELAERFLREDSQLAARRAIVTHLLSLLATF
                     AFYAAYALMAAAAALSRLTLGNMTLYVLSFRSGQQSFQSILSGIGSIYEHNLYMSNLF
                     SYLDAELEGEPRAPATNAALAARSVVSVTHDAPATNGALAPTNDALAPTNAVAAPSEA
                     GIRLEDVSFRYPGKADWVLRHVDLFIPRGQSVALVGQNGAGKTTLVKLVTRLYRPTEG
                     RVLLDGKDLEAWDDDALLARFGVVFQDFNRYQLKLRENVGVGSVEHLADEPRIVRAVE
                     RGGAESVVSELASGLETPLGRWFQDGVELSGGQWQKLALARAFMREQADILVLDEPTA
                     ALDAEAEHAVFERFKTLAAGRTSIIISHRFPTVRMADRILVIEHGSITEEGTHAELVA
                     RAGTYARLYRMQARGYE"
     gene            2766..3008
                     /locus_tag="VLJ38_05190"
     CDS             2766..3008
                     /locus_tag="VLJ38_05190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38937.1"
                     /translation="MDERNYRPEPNPAKTDQVAAGGAILLITAGVIGVVGLILVTLGQ
                     FIAAPLVVLAVGLWAAGKWKLKHDSGMPPTASPPAR"
BASE COUNT          492 a         1097 c          987 g          523 t
ORIGIN      
        1 agcgccgctc gcgctcgacg tggcacagct ccagcgccgc atcgacgaaa acccgcgcct
       61 caagcaatcc ctcgccgacg tgaagatcaa ggatgcggtc gacctgctcg cgacctacgg
      121 cgcgagcggc cgcgacatgc aggcctggct cgcgggcgtc ccgatcaacc gcgatttcag
      181 cctgaagctc gaatacatct cgggcctcgc gctgaacacg ggtgaggccg accccatcta
      241 tgcccatatg gtgcaagggc atagctaccc cgcctttcgc gcccatggcc tggtcgatcg
      301 cgagctccgc cggcgcgtac tcgccggggg aggctaagct ccgagcccat gcgttacctc
      361 cacaccatgc tccgcgtgcg cgatctcgac gtcgcgctcg atttcttcgt caacaagctc
      421 ggcctcacgg agtcgcgacg cagcgtgaac gagcgcggcc gcttcacgct cgtgttcctg
      481 aagagcggcg atcccgcaga tcccgccgaa gtcgagctca cctacaattg ggatcaaccc
      541 gagccctacc cgaccggccg tttcttcggt cacctcgcgt acgccgtgga cgacatctac
      601 gcgacgtgcg agcgcctgcg cgcggcgggc gtcgacatct tgcgaccacc gcgcgacggc
      661 cacatggcgt tcatcaagtc gcccgacggc cactcgatcg agctgttgca acgcggcgac
      721 tcactgccac cgaaggagcc gtggctgtcg ctgccgaatc agggcagctg gtaggtgacg
      781 ccgtcagccg cacgcgcgcc tgaaaagaag aagccgctcg gggtcgcgct gcgcgagagc
      841 ctcgcgtaca tcgctcgcgc gctcgcgctg gtctggcgct cgtcgcgggc gctcacgctg
      901 gcgctcgccg tgctcacgct gctcgcggct gcgacgccgc cggccgtcgc ctgggcaggc
      961 aagcgcatcg tcgacgcggt cgtcgcgcgc tcgcgggagg cgacgctcga ctgggtcgcg
     1021 gcggagctcg tgctcgtcgt gctgcaggcg acgctcggtc gcgggctttc gctcgtgcgc
     1081 gccgtgctcg catcgcgcct cggaacggac gtgaacgtgg cgattttgga gcgtgccgtg
     1141 cggctcgagc tccgccactt cgaggatccc gacttttacg accggctcac gcgcgcgcga
     1201 cgtgaagcct cgtctcggcc ggtctcgctc gtgaccgaga gcttttcgct gctgcaaggc
     1261 gtgctcacgc tggcaggcta cgcggccatt ctcgtgcgct tcagcggctg ggccgtggcg
     1321 ggcctgttgc tcgcgacggt gcccgccacc atcgccgaga tgcgctactc gaagtcggcg
     1381 tttcgcttgc gtaactggcg ctcgcccgac tcgcgccggc tcatgtacct cgaatacgtg
     1441 ctcgccaacg acgagcacgc caaagaggtg aagctcttcg gtctcgggcc gctctttctc
     1501 ggccgctacc gcgagcttgc cgaacgcttc ttgcgcgaag actcgcagct tgccgcgcgc
     1561 cgcgcgatcg tgacgcacct gctctcgctg ctcgcgacgt tcgccttcta cgcggcgtac
     1621 gccctgatgg cggcagccgc cgcgctcagt cgcctcacgc tcggcaacat gacgctttac
     1681 gtgctctcgt ttcgcagcgg gcagcagtcg tttcagtcga ttctgagcgg gatcggcagc
     1741 atctacgagc acaacttgta catgtcgaat ctcttttcgt acctagacgc cgagctcgag
     1801 ggcgagccac gcgcgcccgc gacgaacgcc gcgcttgcgg cgaggagcgt cgtctcggtg
     1861 acgcacgatg cacctgcgac gaacggcgcg cttgccccga cgaacgacgc gcttgccccg
     1921 acgaacgccg tcgccgcgcc gagcgaagcc ggcattcgac tcgaggacgt gagcttccgc
     1981 taccccggca aggccgactg ggtcctccgt cacgtggatc tcttcatccc gcgcgggcag
     2041 agcgtcgcgc tcgtcggcca gaacggcgcc ggcaagacca ccctcgtcaa gctcgtgact
     2101 cggctgtatc gaccgacgga aggtcgcgtc ctactcgacg gcaaggacct cgaagcgtgg
     2161 gacgacgacg cgctcctcgc ccgcttcggc gtcgtctttc aagacttcaa tcgctatcaa
     2221 ttgaagctgc gcgaaaacgt gggcgtgggc agcgtcgagc accttgcgga cgagccgcgc
     2281 atcgtgcgcg ccgtcgagcg cggcggcgcc gaaagcgtcg tgtccgagct cgcgtccggc
     2341 ctcgaaaccc cgctcggtcg ctggtttcaa gacggcgtcg agctgtcggg cggccagtgg
     2401 caaaagctcg cccttgcgcg cgccttcatg cgcgaacaag ccgacattct cgtgctcgac
     2461 gaaccgaccg ccgcgctcga tgccgaggcc gagcacgccg tcttcgagcg gttcaagacg
     2521 ctggccgccg gccgcacctc gatcatcatt tcccatcgct ttccgaccgt gcgcatggcc
     2581 gatcgcatct tggtcatcga gcacggctcg atcaccgaag agggcaccca cgccgagctc
     2641 gtggcgcgcg ccggcacgta cgcgcggctc tatcgcatgc aggcgcgtgg ttatgaatag
     2701 cgcgcaactc gacaccggcg actcgagccg acgctggcac gcgccctgct ttgattccaa
     2761 gcaccatgga cgagcgcaat taccggccag agccgaaccc cgctaaaacc gatcaagtgg
     2821 ccgctggggg cgcgatcctc ctgattacgg cgggggtgat cggcgtcgtc ggcctcattt
     2881 tggtgacact ggggcagttt atcgcggctc ccctcgtcgt tctggcggtg ggtctctggg
     2941 ccgcgggaaa atggaagctg aagcacgact ctgggatgcc acccaccgcg tccccaccgg
     3001 cccgctgagc gcacggacga atcctggaca gctccgccgg gagttcgcac aaaaagcgca
     3061 acatttacgc gcaggcgagc gctagagctt cggagacac
//
LOCUS       DATIML010000298         1529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1216727, whole genome shotgun sequence.
ACCESSION   DATIML010000298 DATIML010000000
VERSION     DATIML010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216727"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..129)
                     /locus_tag="VLJ38_05195"
     CDS             complement(<1..129)
                     /locus_tag="VLJ38_05195"
                     /inference="COORDINATES: protein motif:HMM:NF012799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSU38938.1"
                     /translation="MTALGKVWLVGAGPGDPELISVRGLELLRAADVVLYDALAHSA"
     gene            320..1189
                     /locus_tag="VLJ38_05200"
     CDS             320..1189
                     /locus_tag="VLJ38_05200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38939.1"
                     /translation="MSLSTFASELSPKDTTPPSSARHDRWFVTNGVVAVGPISFELLM
                     RGAAHARIPRGSFVRHESWQVWRRLDEIGSLTPDGRERTVEDLAAKSEGLESRASSPL
                     ESAPPPPPDDFGLTLRPSAPPPTHSTFRVATVDPVGVLSQAYDFAEALLLTISTIVSA
                     SAAEVGLVHRARQDLRSVVTVGGHGPRTERLLGERITEDDPTLAAARSGFTIVSEPGL
                     GNESRHVAGRLVRCLPDVIGVAMVPLRLYGELVAMFEVGRGGHPFRAREIARVEDVVE
                     VLTERAVLMGWFE"
     gene            complement(1199..>1529)
                     /locus_tag="VLJ38_05205"
     CDS             complement(1199..>1529)
                     /locus_tag="VLJ38_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38940.1"
                     /translation="ARALYRDAPILILDEATASIDSDTEARLQRALEELLRDRTALVI
                     AHRLSTIREADRILVMRQGKLVESGTHEELMRVGGLYAKLHELQFSREHVAVPSVRPA
                     ERTAVPS"
BASE COUNT          242 a          507 c          525 g          255 t
ORIGIN      
        1 cgccgaatgc gcgagcgcgt cgtagagcac gacgtccgcc gcccgcagga gctcgagccc
       61 gcgcaccgaa atcagctcgg gatcaccagg acccgcgccg accaaccaaa ctttgccgag
      121 ggcggtcacg aggcatagct accaaaattc ggcgaagact cgcttcatcc cctcggaaat
      181 acggccggtt tcggagggtc aacgcacccg tccacgcgct caccagcacc cgtgtactag
      241 ggttacaggg ccgtaaacct tgtcgctccc tgtaggagag tgtatgcgtt atcgcacaag
      301 gtaggcattc ggggaaatca tgtcgctcag cacttttgct tcggagcttt cgccgaagga
      361 cacgactcct ccgagcagcg ctcgtcatga tcgctggttc gtcacgaacg gcgtggtcgc
      421 ggtcggcccg atttcgttcg agctcttgat gcgcggcgcc gcgcacgcgc gcattccgcg
      481 cggctcgttc gtgcgccacg agtcgtggca agtctggcgc cggctcgacg agattgggtc
      541 gctcacgccc gacggacgcg agcggaccgt cgaggatctc gccgccaaga gcgagggact
      601 cgaatcacgc gcgagcagtc cgctcgaaag cgcgccaccg ccgcctcccg acgacttcgg
      661 tctcacgctg cgcccgagcg cgccgccgcc cacgcattcg acgtttcgcg tcgcgacggt
      721 cgatcccgtg ggcgtgctgt cgcaggcgta cgatttcgcc gaagcgctct tgctcacgat
      781 ttcgacgatc gtctcggctt ccgcggccga ggtcgggctc gtgcatcgcg cgcgacagga
      841 tttgcgctcg gtggtgacgg taggcggtca cggtccgcgc accgagcgcc tgctcggcga
      901 gcgcatcacc gaggacgatc cgacgctcgc cgccgcgcgc agcggcttca cgatcgtgag
      961 cgagccgggg ctcggcaacg aaagccgcca tgtcgccggc cgtttggtgc gctgcttacc
     1021 cgacgtgatc ggcgtcgcga tggtgccgct caggctttac ggcgagctcg tcgcgatgtt
     1081 cgaggtcggc cgcggcggac acccgtttcg cgcgcgcgag atcgcgcgcg tcgaggacgt
     1141 ggtcgaagtg ctcaccgaac gcgccgtgct gatgggctgg ttcgaatagg gctcgaggct
     1201 acgagggcac ggccgttcgc tcggcggggc gaacggacgg caccgcgacg tgctcgcgcg
     1261 aaaactggag ctcgtggagc ttggcgtaga gaccgccgac gcgcatgagc tcttcgtgcg
     1321 tgcccgactc gacgagcttg ccctgccgca tgacgaggat gcgatcggct tcgcgaatgg
     1381 tgctcaggcg gtgagcgatg acgagcgccg tgcgatcacg caagagctcc tcgagcgcgc
     1441 gctgcaagcg ggcctcggtg tcgctgtcga tgctcgccgt ggcctcgtcg aggatcagga
     1501 tcggagcgtc gcggtagagc gcgcgcgcg
//
LOCUS       DATIML010000299         1733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1216781, whole genome shotgun sequence.
ACCESSION   DATIML010000299 DATIML010000000
VERSION     DATIML010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216781"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..1405)
                     /locus_tag="VLJ38_05210"
     CDS             complement(83..1405)
                     /locus_tag="VLJ38_05210"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HSU38941.1"
                     /translation="MSSAAVAVPRVISGARVTSFFFLVTFFCVTFEKVHWNFGGSLGI
                     ADITTVLFLIAFAFEQRDRPLPRTAVVVLGFFAVFVLVYLLGFYNIQTQQGLDQFTKG
                     MVKFVLHFLFLAAGVTYLTRRSRHYFWRTLGWFGAGLVANCLYGILQLLSARAGHNLD
                     KTVLSPLTGGASSINIYGSVGGQSVYRPNALTGDPNHLGIMLDVPLLAFLPLYLRLER
                     GHPWKRRLAWLLGFMLVVQLATLSRSGLLGLAVGLLVLALPYRRFVFSRSLLYPLAGV
                     AVVLAYVLYSRWHYFSVVLRSRVQTGGASSSAHFAVYNFIGQIVHSHPLLGLGLNNFS
                     VYYEFVTGKTNWGPHSFWVALIVETGLVGLLLFIVFLRYVYLRLRAARILGRLLADRR
                     VLPLAWGLTAALTGTLAANFFYLTMQFYYFYALLALALALPIVFARRS"
     gene            complement(1402..>1733)
                     /locus_tag="VLJ38_05215"
     CDS             complement(1402..>1733)
                     /locus_tag="VLJ38_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38942.1"
                     /translation="DALLLLIPEAGGRGRGVLSGKVFEYLAAERPILAVVPPDGAAAD
                     LIRDTGAGVVAAPEDESAIREALLALHARWQAGQLDGPPLSDEWREQLSRATRVEELA
                     DLLKGLV"
BASE COUNT          352 a          595 c          572 g          214 t
ORIGIN      
        1 aaccgctgta gctccggatc ggcgaaatcc tggacgtcgc acagcttgac gtactgtcgc
       61 ttaagcatca cccaggcccc catcaggagc gtcgcgcgaa cacgatcggc aacgcgaggg
      121 cgagcgcgag cagcgcgtag aagtaataga actgcatcgt caggtagaag aagttcgccg
      181 cgagcgtccc cgtcagcgcc gccgtcagcc cccacgcgag cggcagcacc cgccggtctg
      241 cgagcaaccg cccgagaatg cgcgcggccc gcagccgcag gtacacgtag cgcaggaaga
      301 cgatgaacag cagcaacccg accagcccgg tctcgacgat cagcgccacc cagaacgagt
      361 gcgggcccca gttcgtcttc ccggtcacga actcgtagta cacgctgaag ttgttcagcc
      421 ccaggccgag cagcgggtgc gagtggacga tctgcccgat gaagttgtac accgcgaagt
      481 gcgccgagct cgaggcaccg cccgtctgca cacgcgagcg cagcacgacg ctgaagtagt
      541 gccagcgcga atagagcacg tacgcgagca cgaccgcgac gcccgcaagc ggatagagca
      601 gcgagcgcga gaacacgaag cggcgatacg ggagcgcgag caccagcagg ccgacggcga
      661 gcccgagcag accgctgcgc gagagcgtcg ccagctgcac cacgagcatg aacccgagca
      721 gccacgcgag ccgccgcttc cacggatgcc cacgctcgag ccgcagatac aacggcagga
      781 aggcgaggag cggcacgtcg agcatgatcc cgagatgatt cgggtcgccg gtcagcgcgt
      841 tcggccggta gacgctctgg ccgccgaccg agccgtagat gttgatcgag ctcgccccgc
      901 cggtcagcgg cgagagcacc gtcttgtcga ggttgtggcc cgctcttgcg gagagcagct
      961 gcaggatgcc gtacaggcag ttcgcgacga gccccgcgcc gaaccagccg agcgtccgcc
     1021 agaagtaatg gcggctgcgc cgcgtcaggt acgtcacgcc cgccgcgagg aacaggaagt
     1081 gcagcacgaa cttgaccatt cctttcgtga actggtcgag cccctgctgc gtctggatgt
     1141 tgtagaagcc gagcaggtac acgagcacga acaccgcgaa gaagccgagc acgacgacgg
     1201 cggtgcgcgg cagcggcctg tctcgctgct cgaacgcgaa tgcgatcagg aaaagcactg
     1261 tcgtgatgtc ggcgatcccg agcgagccgc cgaagttcca gtgcaccttc tcgaacgtga
     1321 cgcagaagaa cgtcacgagg aagaagaagc tcgttacccg cgcgccgctg atgacgcgcg
     1381 gaaccgcgac cgctgcgctg ctcacacgag ccctttcagg aggtcggcga gctcttcgac
     1441 gcgcgtcgcc cgcgaaagtt gctcgcgcca ttcgtccgag agcggcggcc catcgagctg
     1501 gccggcctgc caccgtgcgt gcaacgcaag cagcgcctcg cggatcgcgc tttcgtcctc
     1561 cggcgccgcc acgacgccgg cgcccgtgtc gcgaatcaga tcggccgcgg caccgtccgg
     1621 cggcacgacg gcgaggatcg gccgctcggc ggcgaggtac tcgaacacct tcccggacag
     1681 cacgccacgg ccgcggccgc ccgcctccgg gatcagcagc agcaacgcat cgg
//
LOCUS       DATIML010000300         1791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1504148, whole genome shotgun sequence.
ACCESSION   DATIML010000300 DATIML010000000
VERSION     DATIML010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504148"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..480
                     /locus_tag="VLJ38_05220"
     CDS             <1..480
                     /locus_tag="VLJ38_05220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38943.1"
                     /translation="LAASLQRDLGPALAGVIAQSIERSLDDKVQARLEVMAHSVARGA
                     MAGVADGWKTSLDSSTPAMDNLVKQVARTAGREATLGFQDAVAKSTAQQKAGAAAPGD
                     VLAAAGRASDSLLVAFRFAGWLLVIAAVFIAATGIVWSVRRLRRPPGSTGPHRPAHA"
     gene            complement(495..1604)
                     /locus_tag="VLJ38_05225"
     CDS             complement(495..1604)
                     /locus_tag="VLJ38_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HSU38944.1"
                     /translation="MRGADERRRAPRALTAELERLALRAARRVYEDLNQSLFRSALRT
                     PAFELSDAAGRLGRWVGGARTLELARTLLVEHGWGVLVEVLKHEMAHQYADEVLGVHD
                     EAAHGSTFRRICAERGIDARAAGAPRAEHTAEEHVLERVAKLLALAESPNEHEAQAAM
                     GAAQRLMLKHNLDSLTRSTRPVYDFRHLGAPSGRIGESQRILAHILAEHFFVEVIWVP
                     VWRPLEGRRGSVLEVCGSPENLELAEYVHAFVNHTGARLFGEYRAGDRRRSARERERF
                     LAGLMAGFREKLDSERKKSRAAGLIWRGDGELHDFFRGRHPHIRMTRHATHSGTEAYA
                     QGREAGKRLVVHRGVKATASEGGPRLLPGASSRSR"
BASE COUNT          256 a          648 c          615 g          272 t
ORIGIN      
        1 ctcgcggcat ccctgcagcg cgacctcggg cccgctcttg caggcgtgat cgcccagtcc
       61 atcgagcgta gcctcgacga taaggtgcag gcacgactcg aagtgatggc gcactccgta
      121 gcccgcggag ccatggcggg cgtcgccgac ggctggaaaa ccagcctcga ctcctcgact
      181 ccggccatgg acaatctcgt gaaacaggtc gcgcgcaccg ccgggcgaga ggcgacgctc
      241 ggctttcagg acgccgtcgc caagagcacg gcgcaacaga aggccggcgc agctgcaccc
      301 ggcgacgtgc tcgccgcggc cggacgcgcg agcgactcgc tgctggtcgc gtttcgcttc
      361 gccggctggc tgttggtcat cgctgcagtg ttcatcgcgg caacgggcat cgtctggtcc
      421 gtccggcgcc tgcgacgccc gcccggttcg acggggccgc atcgacccgc gcacgcctga
      481 gaagcgccgc tccgctagcg cgagcgcgac gaagcgccgg ggagcagccg cggcccgcct
      541 tcgctcgccg tcgccttgac accgcgatgc acgacgagtc gcttgccggc ttcacgcccc
      601 tgcgcgtagg cctcggtccc gctgtgggtc gcgtggcgcg tcatgcggat gtgcgggtgc
      661 cggccgcgaa agaagtcgtg gagctcgccg tcaccgcgcc agatgagtcc cgccgcgcgg
      721 ctctttttac gttccgaatc gagcttttca cgaaagcccg ccatcaagcc cgcgaggaag
      781 cgctcgcgtt cacgggcgct gcggcgtcga tcgcccgccc ggtactcgcc gaacaggcgg
      841 gcgcccgtat ggttcacgaa ggcgtgcacg tactcggcga gctcgagatt ctcgggcgag
      901 ccgcacactt cgagcacgct gccgcggcga ccctcgagcg gccgccacac gggcacccaa
      961 atcacctcga cgaagaaatg ctcggcgagg atgtgcgcca agatgcgctg gctctcgccg
     1021 atgcgcccgc tcggcgcgcc gaggtgacgg aaatcgtaca cggggcgcgt cgaccgcgtg
     1081 aggctgtcga ggttgtgctt gagcatcaag cgctgcgccg ctcccatcgc cgcctgcgct
     1141 tcgtgctcgt tcggactctc ggcgagcgcg agcagcttcg cgacccgttc gagcacgtgc
     1201 tcttccgccg tgtgctccgc gcgcggcgcg cccgcggcgc gcgcgtcgat gccgcgctcc
     1261 gcgcaaatgc ggcggaaggt cgagccgtgc gccgcttcgt cgtgcacgcc gagcacttcg
     1321 tcggcgtatt ggtgcgccat ttcgtgtttc agcacttcca cgagcacgcc ccagccgtgc
     1381 tcgacgagca gcgtgcgggc gagctcgagc gtgcgcgcgc cgcccaccca acgtccgagc
     1441 cggcccgcgg cgtcggagag ctcgaaggcc ggggtgcgca gggccgagcg gaagagcgac
     1501 tgattcaggt cttcatagac gcgacgcgcg gcgcgcagcg cgagacgctc gagctcggcc
     1561 gtgagcgcgc ggggagctcg tcgccgttcg tctgcgccac gcatcgttcg ccgtcgtgcc
     1621 tctgtttcgc cggcgctcag tgacgaacgc ccggtgcctc ggcgcccgtc tgctcgacgt
     1681 actcgctgta cccgccgccg tacgtccgca cgccgccgtg gtcgagctcg agcacgcggt
     1741 tcgagagccg ccgcaagaaa tgccgatcgt gcgagacgaa caacatcgtg c
//
LOCUS       DATIML010000301         7333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_926440, whole genome shotgun sequence.
ACCESSION   DATIML010000301 DATIML010000000
VERSION     DATIML010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7333
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_926440"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VLJ38_05230"
     CDS             <1..653
                     /locus_tag="VLJ38_05230"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HSU38945.1"
                     /translation="DGAGSPGTAGHERAALVDVRRGEQERAATLGRYGAQIFLDYSSA
                     DVKEPRDDRIVTDLVALLRATRPEVVYTHALSDAHETHVAVALRLIAACRALAPAERP
                     ERVLGCEVWRDLDWLSPVDRVTLPADERPELQAALLGVFASQLAAKNYAAAALGRRAA
                     HAAFSDSHASDRHRGVVWAMDLSPLVAGTADVSEYARELVRRLEDDVLGRIRRLGG"
     gene            803..2305
                     /locus_tag="VLJ38_05235"
     CDS             803..2305
                     /locus_tag="VLJ38_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HSU38946.1"
                     /translation="MKLDDYELDPKSYDEMFTAGGLVRPEYRALAQRLAEMTQPEVEQ
                     RQRQADLLLRNQGVTFTVYSDNAGIEKVFPFDPIPRLITGEEWAEVERGLIQRVQALN
                     LFLKDVYGEQRILNDGVVDAGLVYGASGFRREMIGMLPPQSVYTHIVGTDLIRDEQGR
                     FLVLEDNVRSPSGASYVLECREVLKRVFRVLFDQYGVQPLDAYADWLRETLLHVSPRV
                     SDSPTIVLLSPGMYNSAYFEHSFLARRMGATLVEGRDLVVKDGAVCMRTTNGLRRVDV
                     IYRRIDDDYLDPVVFRPDSILGCAGLFAAYRSGAVALANAPGTGVADDKAIYPFVPDM
                     IRYYLGEEPILENVRTYIATRDDDRKYILENIGSLCIKQTDASGGYGMLIGTQSTAEQ
                     RDEFRRRIEARPRSYIAQPVINLGRHPTVIDGKLEGRCVDLRPYVLFGDKVRVIPGGL
                     TRVALRKGSLVVNSSQGGGYKDTWVLTGAGDRVPGSADKASADKALANGV"
     gene            2309..3217
                     /locus_tag="VLJ38_05240"
     CDS             2309..3217
                     /locus_tag="VLJ38_05240"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HSU38947.1"
                     /translation="MLSRVADALFWMGRYLERVEHVSRVLDVTRSVLVDIDEVDPEMA
                     KSQLRGALTALSLPDAPTEKLIFDQNESTSLVCAISRARENARQVREVISEEMWAHLN
                     QAYWSIQEAHSRGVHESQLSQTLGGIISASFLWDGVADGTTARDTGWLFLKIGKFVER
                     LDGTCRLVSVRADGPPKGGPPSSESVHWVALLRSLCAMEAYKKVHPQRVDKKHVLDFL
                     IFDGTYPRTLRYAAVAAADFAQKCADIHGPRGKAVERAFGKIASHLEYADINEVDATG
                     AAEFLRELLSELGDASALLQRAYFLQ"
     gene            3255..4250
                     /locus_tag="VLJ38_05245"
     CDS             3255..4250
                     /locus_tag="VLJ38_05245"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HSU38948.1"
                     /translation="MLLGIQHRTELTYGDPVSESVMELRVMPRSDKNQTLRAFNLKVG
                     PEAAVFSHRDWMDNQAHHFTIPDFHDRVLIVAGSTVETHPKFVELTEAPDRLPLTELN
                     PRFQDFLGFLGPVQRDPRLVQFAEQVGLFRCTRAAEAALLVTMRLRERLEYKKGVTSS
                     ATTVCDALDLGQGVCQDFSHVGLALLRMVGIPARYVSGYLYRESVRELETHAWCEAYV
                     PSLGWVGVDPTHSEAASEGHVAVAVGRSYADVPPNRGVYRGDAEERIAVQVTIDRFDD
                     DLASLPPFSPGSFDVPIFRDGPAARRDRAMNLRQLEQQQQQQQQQQQQQQQQQQQ"
     gene            4359..4847
                     /locus_tag="VLJ38_05250"
     CDS             4359..4847
                     /locus_tag="VLJ38_05250"
                     /inference="COORDINATES: protein motif:HMM:NF016184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase family protein"
                     /protein_id="HSU38949.1"
                     /translation="MLRGVPLAEIRNFLAVNDWLATAGQPSEAELTDVAASGFELVVN
                     LGLLDPRYCLPDEAGTAARLGLAYEHVPVDFNAPKLEDFLRFERVLTETAGKRTFVHC
                     AKNYRVSCFVALYGERHFGWSPEQALAHVHTVWAPDETWQKFMQTVRAELGSGALGVG
                     RP"
     gene            4860..5327
                     /locus_tag="VLJ38_05255"
     CDS             4860..5327
                     /locus_tag="VLJ38_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38950.1"
                     /translation="MINGAHLIVYSKQPAADRAFFQDVLGLTHVDVGDGWLIFGLPPS
                     EVAVHPGKKDGVHELYLMCEDVNAFVKAMKAKKIACDAVKDQGWGLLTSVTLPGGGKL
                     GVYEPRHARPGVKAKRGASGSGKAAPARAKPRGETTVVARAKRGAKTAATRRR"
     gene            5324..6055
                     /locus_tag="VLJ38_05260"
     CDS             5324..6055
                     /locus_tag="VLJ38_05260"
                     /inference="COORDINATES: protein motif:HMM:NF021371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HSU38951.1"
                     /translation="MTAPPRPFLTARWEHLVLLNYTVPQRLIAPLVPHGTEIDRFGGE
                     ALASLVAFRFAETRLLGWSIPGHRVFPEVNLRFYVSRVAPDGVRRRAVVFVSELVPRF
                     AVAALARAAYNEPYRTVPMAHETALDPESGGYVCYAWRSGPHFYALEASADGPADSLE
                     PGSEAEFVTEHYFGYTRQRDGSTLEYGVEHPPWRVWDTPRAGFFGPAAALYGDDWGRV
                     LSARPRSAFVALGSDVTVRRGTRVA"
     gene            complement(6024..6908)
                     /locus_tag="VLJ38_05265"
     CDS             complement(6024..6908)
                     /locus_tag="VLJ38_05265"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HSU38952.1"
                     /translation="MPIREIILGDNAEVLPTLPASFAELIYIDPPFNSGRTQRRKRLR
                     VTADAEGTRRGFGGRTYRVEQIGESSYADTFEDYRAFLMPRIAASLRCLTPDGSLFVH
                     LDAREVHYVKVELDALLGRDAFMNEIIWAYDFGGRPKTRWPAKHDSILWYAKSPLDYV
                     FDYDAIDRIPYLAPGLVGPEKARRGKTPTDVWWQTIVPTNGRERTGYATQKPLALLER
                     IVRVHSRPGATVLDFFAGSGTTGDAAARQGRGFVLVDQSRDAVKVMAERLAAHEPTLV
                     GFGSRRGELKRRASRGAP"
     gene            complement(6924..>7333)
                     /locus_tag="VLJ38_05270"
     CDS             complement(6924..>7333)
                     /locus_tag="VLJ38_05270"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HSU38953.1"
                     /translation="IHKEFQYQPGSTTVATPLREVLRARRGVCQDFAHLQIGMLRSLG
                     LSARYVSGYIYNQPKDGERGLTGADASHAWVAVYCPDFGYVDFDPTNGVIPSDEHVTL
                     AWGRDFSDASPLKGVILGGGEHTVSVAVDVARV"
BASE COUNT         1195 a         2456 c         2479 g         1203 t
ORIGIN      
        1 cggacggagc gggcagcccc gggacggccg ggcacgagcg cgcggcgctc gtcgacgtcc
       61 gtcgcggcga gcaggaacgg gcggcgacgc tcgggcgcta cggcgcgcaa atctttctcg
      121 actactcgag cgcggacgtg aaggagccgc gcgacgatcg catcgtgacc gatctagtcg
      181 cgctcttgcg cgcgacgcgc cccgaggtcg tgtacacgca tgccctgtcg gacgcgcacg
      241 agacacatgt cgcggtcgcg ctgcgcctca tcgccgcctg tcgcgcgctc gcccccgctg
      301 aacgtccgga gcgcgtgctc ggctgcgaag tgtggcgcga tctcgattgg ctctctccgg
      361 tcgacagagt cactttgcct gctgacgagc gcccggagct tcaggcagcg ctgctcggtg
      421 tcttcgcttc gcagctcgct gcgaaaaact acgccgcggc cgcgctcgga cgccgggccg
      481 cgcacgcggc tttctccgac agtcacgcga gcgatcgtca ccgcggcgtc gtctgggcca
      541 tggatttgtc accgctcgtc gccgggactg cggacgtgag cgagtacgcg cgagagctcg
      601 tgcgccggct cgaagacgac gtgcttggcc ggattcggcg ccttggcggc tgacccggcc
      661 gcgcccacac ctcaccacat cgattcgagc aagcggcccg acggacgacg tgtcaggtac
      721 tgcgtcgcct aattcgagcg aggggtaccc tggccacaca gctgaaacat gtcggaatcc
      781 atgggacggg tgaggtggtg acgtgaagct cgacgactac gagctcgatc cgaagagcta
      841 cgacgagatg ttcacggctg gcgggctggt gcgaccggag taccgcgcgc tcgcccaacg
      901 tctcgccgaa atgacgcaac cggaggtcga gcagcggcaa cgccaggccg accttttgct
      961 ccgcaaccag ggcgtgacct tcacggtcta ctccgacaac gcgggtatcg agaaggtgtt
     1021 ccccttcgat ccgatcccgc gcctcatcac gggggaagag tgggcggagg tcgagcgcgg
     1081 gctcatccag cgtgtgcagg cgctgaacct attcttgaaa gacgtctacg gcgagcagcg
     1141 catcctgaac gacggcgtcg tggacgcggg gctcgtctac ggcgcgagcg gcttccggcg
     1201 cgagatgatc ggcatgctgc cgccgcagag cgtctacacg cacatcgtcg gcacggatct
     1261 gattcgtgac gagcaggggc gcttcctcgt gctcgaagac aacgtgcgga gcccgagcgg
     1321 cgcgtcctac gtgctcgagt gccgtgaggt gctcaagcgc gtcttccgcg tgctcttcga
     1381 tcaatacggc gtgcagccgc tcgacgcgta cgccgactgg ctgcgcgaga cgctgctcca
     1441 cgtctccccg cgcgtttcgg actcgccgac gatcgtgctc ctcagtccgg gcatgtacaa
     1501 ctcggcgtac ttcgagcaca gcttcctcgc gcgacgcatg ggcgcgacgc tcgtcgaggg
     1561 gcgcgacctc gtcgtcaagg acggcgcggt gtgcatgcga acgacgaacg gcctgcgccg
     1621 cgtcgacgtg atctaccgcc gtatcgacga cgactacctc gaccccgtcg tgttccgtcc
     1681 cgattccatt ctcggctgcg ccgggctctt cgcggcgtac cggagcggcg ccgtcgcgct
     1741 cgcgaacgcg ccgggcacgg gcgtcgccga cgacaaagcg atctacccgt tcgtccccga
     1801 catgatccgc tactacctcg gcgaggagcc gattctcgaa aacgtgcgga cgtacatcgc
     1861 gacgcgcgac gacgatcgca agtacatcct cgaaaacatc ggttcgctct gcatcaagca
     1921 gaccgacgcc tcgggcggct acggcatgct gatcggcacg caaagtacgg ccgagcagcg
     1981 cgacgaattc cgccggcgca tcgaagcgcg cccgcgctcc tacatcgcgc agcccgtcat
     2041 caacctcggc cggcacccga cggtcatcga cggcaagctc gaggggcgct gcgtggattt
     2101 gcgtccctac gtgctcttcg gcgacaaggt gcgcgtgatc cccggcgggc tcacgcgcgt
     2161 ggccctccgt aaaggctcgc tcgtcgtgaa ctcgagtcag ggcggcggct acaaagacac
     2221 ttgggtgctc acgggcgccg gcgacagagt cccaggtagc gccgacaagg cgagcgccga
     2281 caaggcgctc gcgaacgggg tctaacgcat gctgagccgc gttgccgacg ccttgttctg
     2341 gatggggcgc tacctcgaac gcgtcgagca cgtctcgcgc gtgctcgacg tcacccgctc
     2401 ggtgctcgtc gacatcgacg aggtcgaccc cgaaatggcc aagagccagc tgcggggggc
     2461 gctcaccgcg ctctcgctgc ccgacgcgcc gacggaaaag ctcattttcg accaaaacga
     2521 atccacgtcg ctcgtgtgcg cgatttcacg cgcgcgcgag aacgcgcgcc aggtgcgtga
     2581 ggtcatcagc gaagagatgt gggcccacct gaaccaggcc tactggtcga ttcaggaagc
     2641 ccactcccgc ggcgtccacg aaagccaact ttcgcagacg ctcggcggca tcatctcggc
     2701 gagcttcttg tgggacggcg tcgccgacgg cacgaccgcg cgcgataccg gctggctctt
     2761 cttgaagatc ggcaaattcg tcgagcggct cgacggcacc tgtcgcctcg tcagcgtgcg
     2821 cgccgacgga ccacccaagg gcggcccgcc gagcagcgag agcgtccatt gggtggcgct
     2881 gctccggagc ctctgcgcga tggaggcgta caagaaggtt cacccgcagc gcgtcgacaa
     2941 aaagcacgtc ctcgatttct tgatcttcga cggcacctac ccgcgcacgt tgcgttacgc
     3001 cgccgtcgca gccgcggact tcgcgcaaaa atgcgcggat atccacggcc cgcgcggcaa
     3061 ggccgtcgag cgcgctttcg gcaaaatcgc gtcacacctc gagtacgccg acatcaacga
     3121 agtcgatgcg accggcgcgg cggagttttt gcgcgagctc ctgagcgagc tcggtgacgc
     3181 gagcgctctc ttacagcgcg cttacttcct gcaatgatcg ctcacccctg aagtaacgga
     3241 acccggagaa cgacatgctg ctcggcattc aacatcggac ggagctcacg tacggcgatc
     3301 ccgtcagcga atcggtcatg gagctccggg tcatgccgcg cagcgacaaa aaccaaacgc
     3361 tgcgcgcctt caacctgaag gtcggccccg aagcggcggt cttcagtcat cgcgattgga
     3421 tggacaacca agcgcaccac ttcaccatcc ccgactttca cgatcgggtc ctgatcgtgg
     3481 cgggctcgac cgtggagacg cacccgaaat tcgtcgagct cacagaggcc cccgatcggc
     3541 tgccgctcac ggagttgaac ccgcgatttc aggatttttt gggttttctg gggccggtcc
     3601 agcgcgatcc gcgcctcgtc caattcgcgg agcaggtcgg gttgttccgc tgcacgcgcg
     3661 cggcggaggc ggcgctgctc gtgacgatgc gcctgcgcga acggctcgag tacaagaagg
     3721 gcgtcacctc gagcgcgacg acggtgtgcg acgcgctcga tctcggacag ggcgtctgcc
     3781 aggacttctc gcacgtcggg cttgcgctgc tgcgcatggt gggcattccg gcgcgctacg
     3841 tctcgggcta cctctaccgc gagtctgtgc gcgagctcga gacgcacgct tggtgcgagg
     3901 cgtacgtgcc ttcgctcggt tgggtgggcg tcgatccgac gcactccgaa gcggcgagtg
     3961 aggggcacgt cgccgtcgcc gtcgggcgca gttacgccga cgtgccgccc aaccgtggcg
     4021 tataccgtgg cgacgcggag gagcgcatcg cggtccaagt gacgatcgat cgtttcgacg
     4081 acgatctcgc gtcgctcccg ccgttttcgc ccggttcgtt cgacgtgccg attttccgcg
     4141 acggaccggc ggcacggcgc gatcgagcga tgaatttgcg gcagctcgag cagcaacagc
     4201 agcaacagca gcaacagcaa caacagcaac aacagcaaca acagcagtag gccgtgctcg
     4261 ggcgcgtggg ggcgggacca ccagagcggg gccctgcaat gcgcggctca ggtaggcagg
     4321 agttgaggcg gggctggcgg gtggcgcagc ggggctccat gctccggggc gtgccgctcg
     4381 cggagattcg gaatttcctg gccgtgaacg attggctcgc gaccgcgggc caaccgagcg
     4441 aagccgagct cacggacgtg gcggcgagcg ggttcgagct ggtcgtcaat ctcgggcttc
     4501 tggatccgcg gtactgcctg cccgacgagg caggcacggc ggcgcggctc ggccttgcct
     4561 acgagcacgt cccggtcgat ttcaatgccc ccaagctgga ggatttcctg cgcttcgaac
     4621 gggtgctcac cgagactgct ggcaagcgga ccttcgtgca ttgcgcgaag aactatcgag
     4681 tatcctgctt cgtcgcgctc tacggagagc ggcacttcgg gtggtcgccc gagcaggcgt
     4741 tagcgcacgt gcacacagtg tgggcgccgg acgagacctg gcagaagttc atgcaaaccg
     4801 tgcgcgcgga gctcggttcg ggggctctcg gcgtaggccg gccgtgatac gcgagcagca
     4861 tgatcaacgg tgcccatctc atcgtctaca gtaagcagcc cgcggccgat cgcgcgtttt
     4921 ttcaggacgt gctcggcctc acccacgtcg acgtgggcga cggttggctc atcttcggtt
     4981 tgccaccgtc ggaagtcgcg gtgcatcccg gcaagaagga cggcgttcac gagctctatc
     5041 tcatgtgtga agacgtgaac gctttcgtca aggcgatgaa ggcgaagaaa atcgcctgcg
     5101 atgccgtcaa ggaccagggt tggggcttac tcacgtcggt cacgttgccg ggcggcggca
     5161 agctcggcgt gtacgaaccg cggcacgcgc gcccgggcgt gaaggcgaag cgcggagcga
     5221 gcggctccgg caaagccgcg ccggcgcgcg cgaagcctcg cggtgaaacc acggtcgtcg
     5281 ctcgcgccaa gcgcggcgcg aagaccgcgg ccacgcgtcg tcgatgaccg ccccgccgcg
     5341 tccgttcctc acggcacgct gggagcactt ggtgctcctc aactacacgg tgccccagcg
     5401 cttgatcgcg ccgctcgtcc cgcacggcac cgaaatcgac cgtttcggcg gcgaagcgct
     5461 cgcgagcctc gtcgcgtttc gcttcgccga gacgcgcttg ctcggctggt caatcccggg
     5521 ccatcgcgtc tttccggaag tcaatttgcg attttacgtc tcgcgcgtcg cgcccgacgg
     5581 cgtgcggcgg cgcgcggtcg tcttcgtgag cgagctcgtg ccgcgcttcg ccgtcgcggc
     5641 actggcgcgc gccgcgtaca acgagccgta ccggacggtg cccatggcgc acgagaccgc
     5701 gctcgatccg gagagcggcg gctacgtctg ctacgcgtgg cgctcgggtc cgcacttcta
     5761 tgcgctcgag gcgagcgcgg atggacccgc cgattccctc gagccgggct ccgaagccga
     5821 gttcgtcacc gaacactact tcggctacac gcgacagcgc gacggctcga cgctcgaata
     5881 cggcgtcgag cacccgccgt ggcgcgtctg ggatacgccg cgcgccggct ttttcggccc
     5941 cgccgccgca ctctacggcg acgactgggg gcgcgtcctc tccgcgcggc cgcgctcggc
     6001 gttcgtcgcc ctcggctccg acgtcacggt gcgccgcggg acgcgcgtcg cttgagctcg
     6061 ccgcgccgcg agccgaagcc gacgagcgtc ggctcatgtg cggcgagtcg ttcggccatg
     6121 accttcaccg cgtcacggct ctgatcgacg agcacgaagc cgcggccctg gcgcgccgcc
     6181 gcgtcgcccg tcgtgccgct gcccgcgaag aaatcgagca cggtcgcgcc gggtcgcgag
     6241 tggacgcgca cgatacgctc gaggagcgcg agcggcttct gcgtcgcgta gccggtgcgt
     6301 tcgcggccgt tggtcgggac gatggtttgc caccacacgt ccgtcggcgt cttgccgcgg
     6361 cgcgcctttt cgggcccgac gagcccaggc gcgaggtacg ggatgcgatc gatggcgtcg
     6421 tagtcgaaca cgtaatctag cgggcttttc gcgtaccaga ggatgctgtc gtgcttggcg
     6481 ggccagcgcg tcttcgggcg gccgccgaaa tcgtacgccc agatgatttc gttcatgaac
     6541 gcgtcgcggc cgagcagcgc gtcgagctcc actttgacgt agtgcacttc acgcgcgtcg
     6601 aggtgcacga acaagctgcc gtcgggcgtg aggcagcgca ggctcgccgc gatgcgcggc
     6661 atgaggaagg cgcgatagtc ctcgaaggtg tcggcgtagc tgctctcgcc gatttgttcg
     6721 acgcggtagg tgcgtccgcc gaacccgcgg cgcgtgccct cggcgtcggc ggtcacgcgc
     6781 aggcgcttgc gacgctgcgt gcggccgctg ttgaagggcg gatcgatgta gatgagctcg
     6841 gcgaagctcg cgggtagcgt gggcagcacc tcggcgttgt cgccgaggat gatctcgcga
     6901 atcggcatcg accgcaccgt ccgtcagact cgcgccacgt cgacggcgac gctcacggtg
     6961 tgctcgcccc cgccgaggat gacgcctttc aagggactcg cgtcgctgaa atcgcggccc
     7021 cacgcgaggg ttacgtgctc gtcggaaggg atcacgccgt tcgtgggatc gaaatcgacg
     7081 tagccgaagt cgggacaata gacggccacc cacgcgtgcg acgcgtcggc gcccgtgagc
     7141 ccgcgctcgc cgtccttcgg ttggttgtag atgtaaccgg acacgtagcg cgccgagagc
     7201 ccgagcgagc gcagcatgcc gatttgcaga tgcgcgaagt cctggcacac accgcggcgc
     7261 gcgcgcagca cctcgcgaag cggcgtcgct accgtggtcg aaccgggctg atactgaaat
     7321 tccttgtgaa tgc
//
LOCUS       DATIML010000302         2188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3237474, whole genome shotgun sequence.
ACCESSION   DATIML010000302 DATIML010000000
VERSION     DATIML010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3237474"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..930
                     /locus_tag="VLJ38_05275"
     CDS             286..930
                     /locus_tag="VLJ38_05275"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU38954.1"
                     /translation="MPRIERILVQSVTRTFGAVAALRAVSLELEAGQIFMLEGENGAG
                     KSTLLSVLATVLKPTLGRVIYDPIGEELELVRPELGWVSHESLCYRELTGRENVELAG
                     RAYGVVDPTAWERARDRVDARAFADRPVRTLSRGQRQRIALARALVHEPSVLLLDEPW
                     AGLDGKSSELLERALVTERERGSLVIVSSHAPEQAERLGARRIRLAGGRVALRS"
     gene            complement(952..1650)
                     /locus_tag="VLJ38_05280"
     CDS             complement(952..1650)
                     /locus_tag="VLJ38_05280"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HSU38955.1"
                     /translation="MTTSSLRRIVMLGTGTGVGKTWLACELVRALRARGHRPLGLKPI
                     ESGVTDSNATDGALLARSTFDERERAQALELRAPYRFADPISPHLAARRVGRDISLDA
                     ALRYVQENESAGPPLSAFDVCVIETAGGLFSPLAPGVTNWDLAQALTPAKWLLVAPDA
                     LGVLHDVTATLLAARARGRLPDAIALCAARPADASTGTNAHEIELLGIASRPVVFPAD
                     GAAGLDRLLANLLV"
     gene            complement(1647..>2188)
                     /locus_tag="VLJ38_05285"
     CDS             complement(1647..>2188)
                     /locus_tag="VLJ38_05285"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSU38956.1"
                     /translation="LGVFGPSGAGRCVEAGIAPDVLIGTLGKAIGTQGAFVAGSDLLR
                     RFLWNRARSFVFSTASSPLLAARSLLHVERARAADDLRARLRTTASQLRDRLDSLGVR
                     TEPGLNGPIVPVLVGDNESAVRAASELQSAGILAQAIRPPTVPPGSARLRITVSAAWP
                     NDAVERVSAAVALALGLRG"
BASE COUNT          361 a          719 c          776 g          332 t
ORIGIN      
        1 cgcatactag caccgcccac gaagcggaca gcgccccaaa acggccgaat tttccgcaac
       61 cgatgcgcag ccggcgcgga gcgcagcaga cgcgaggttg atgggtctcg gaaggcagat
      121 cacgatcggg gcctgtgacc catcggcgtg tgaaatgccg gcgaggtcgg cgtttggccg
      181 agccggcagg ctagtggcgt aggcctttcg gcggtgcgtc tctgcgaagg ccctccagta
      241 gagcctgatt tcgggcggcc gaagagcggt ggtacacagg gccaagtgcc gcgtatcgag
      301 cgcatcctgg tccaatcggt gacccgcacg tttggggccg tcgcggcttt gcgggcggta
      361 tcgctggagc tcgaggcagg gcaaatcttc atgctcgagg gcgaaaacgg tgccggcaag
      421 agcacgctgc tgtcggtgct cgccaccgtg ctcaagccga cgttgggccg cgtgatttac
      481 gaccccatcg gcgaagaact cgagctggtt cgtccggagc tcggctgggt gtcacacgag
      541 tcgctttgct accgcgagct cacggggcgc gagaacgtgg agctcgcggg tcgtgcctac
      601 ggtgtcgtgg accccacggc ctgggagcgc gcccgcgatc gggtcgacgc gcgcgctttc
      661 gccgatcgtc cggtgcgcac gctttcgcgc ggccaacggc aacgcatcgc gctcgcgcgg
      721 gcgctggttc acgaaccaag cgtgctgctc ctcgacgaac cttgggccgg actcgacggc
      781 aagagctccg agttgctcga gcgcgcgctc gtaacggagc gcgagcgcgg tagcctggtc
      841 atcgtctcga gccatgcacc cgagcaagcc gagcgcctcg gcgcgcgccg cattcgcctc
      901 gcaggcggtc gcgtagccct gcgctcctga atgcgccggg ttgagttgca gtcacacgag
      961 taaattcgcg agtagacggt cgagccccgc ggcgccatcc gcgggaaaga ccaccggccg
     1021 tgaagcgatg cccagtagct cgatttcgtg ggcgttcgtt cccgtgctcg catcggccgg
     1081 ccgggctgca cagagcgcga tcgcgtccgg gagccgacct cgagcgcggg cggcgaggag
     1141 tgtcgcggtc acgtcgtgaa gcacgccgag cgcatcgggc gcgacgagca gccacttcgc
     1201 tggcgtgagt gcctgtgcca ggtcccagtt cgtcactccg ggcgcgagtg ggctgaagag
     1261 tccgccggcc gtctcgatga cgcagacgtc gaacgcgctc agaggcggcc cagccgactc
     1321 gttctcctgg acataccgga gggcagcgtc gaggctaatg tcacgtccga cgcggcgagc
     1381 ggcgaggtgc ggggaaatgg gatcggcaaa ccggtatggc gccctgagct ccagcgcctg
     1441 cgcgcgctcg cgctcatcga aggtggaacg cgcgaggagc gcgccatcgg tggcgttcga
     1501 gtccgtgacg ccgctctcga tgggtttcag tccgagtgga cgatgccccc gagcgcgtag
     1561 cgcgcggacg agctcgcagg cgagccatgt cttgccgacg ccggtgccgg tgccgagcat
     1621 cacgatgcgc cgaaggctcg aggtcgtcac cctcgcagtc caagcgcaag cgcgacggct
     1681 gccgagacac gttcgacggc gtcgttgggc cacgccgcgc tcaccgtgat gcgaagccgc
     1741 gcgctgccgg gcggcacagt cggcgggcga atggcctgcg ctaagatgcc tgccgattgg
     1801 agctcagagg ccgctcgcac ggcagactcg ttatcaccga caaggaccgg gacgatcgga
     1861 ccgttcagtc cgggttcggt tcgaaccccg agcgaatcaa gacggtcgcg caactgcgac
     1921 gcggtggttc gcagcctggc gcgcaggtcg tccgcggccc gcgcgcgttc cacgtgcaac
     1981 aagctgcggg ctgccagcaa aggcgaactc gcggtcgaga agacgaagct gcgcgcgcgg
     2041 ttccacagaa accggcgtag cagatccgac ccggcgacga acgctccttg cgttccaatc
     2101 gccttgccca gcgtgccaat cagtacgtcg ggcgcgattc cggcctccac gcagcggcca
     2161 gcaccgcttg ggccgaacac tcctaggg
//
LOCUS       DATIML010000303         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2659240, whole genome shotgun sequence.
ACCESSION   DATIML010000303 DATIML010000000
VERSION     DATIML010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2659240"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VLJ38_05290"
     CDS             complement(<1..272)
                     /locus_tag="VLJ38_05290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38957.1"
                     /translation="MDSYRPDSDRDPQETQEWVESLESVVEHEGANRARFVLGRVVEA
                     ARRLGAEPPLPVTTDYVNTIPVADEPEYPGDRQMERRIQQIIRWNAA"
     gene            364..1536
                     /locus_tag="VLJ38_05295"
     CDS             364..1536
                     /locus_tag="VLJ38_05295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSU38958.1"
                     /translation="MPRLLSFALFFSVMLTLVGAVHYYIWARLVRDTMLPPPWQRVAT
                     AAIVAMYVLVPLSFFARRVGASFAVPLVWIASVWMGFLLLFLVVLAAGDLLRGSLALA
                     GKLGALPPADPERRLLLARWFGLFVLATTGGLSAVAVRSGLARVALRDVNVRLRRLPK
                     SLDGLTIVQLTDVHVGPTIGRAFIEDIVARTNAVSPDVIAITGDLVDGSVEDLRAAVA
                     PLAGLKARYGVYFVTGNHEYYSGAPEWCAEIERLGIRVLRNERVSIGNGTDSFDLAGI
                     DDAHAHQFGEGHGPDLGRAVAGRDPARELVLLAHQPRAVFEAAEHGVGLQLSGHTHGG
                     QIWPWNYAVRLQQPVVRGLARFGETQVYVSSGTGYWGPPMRLGAPAEITRVTLRTT"
BASE COUNT          214 a          551 c          595 g          293 t
ORIGIN      
        1 gcggcgttcc agcgaatgat ctgctggatg cgtcgctcca tctggcggtc gccggggtac
       61 tccggctcgt ccgctacggg gatggtgttg acgtagtcgg tggtgaccgg cagcggcggt
      121 tcggcgccga gacgccgtgc agcctcgacg acgcgaccga gcacgaagcg cgcgcggttc
      181 gccccttcgt gctcgacgac ggactcgagc gactcgaccc attcctgggt ctcttgcggg
      241 tctcgatcgg agtcgggcct atagctatcc acggcgagcg aggcgtatcg cgagacggtc
      301 cggtattcaa ggacggacac ggcccttggc agaccgggcc gcgcggccca tacatgtccg
      361 ggcatgccgc gcctgctttc gttcgcgctc ttcttcagcg tcatgctgac gctcgtgggg
      421 gccgtccact actacatttg ggcgcgactc gtgcgcgaca cgatgttgcc gccgccctgg
      481 cagcgggtgg cgaccgcggc catcgtggcc atgtacgtac tcgtcccact atcttttttt
      541 gcgaggcgcg tcggggcaag ttttgcggtg ccgctcgtgt ggatcgcgtc ggtgtggatg
      601 gggttcctgc tcctgttcct ggtggtgctc gcggcgggcg acctcttgcg cggcagcctg
      661 gccttggcgg gcaagctcgg ggctctgccg cccgccgacc cggagcggcg cctgctgctc
      721 gcgcgctggt ttgggctctt cgtcctggcc acgacgggcg gcctctcggc ggtcgcggtg
      781 cgctcggggc tcgcgcgcgt cgcgctgcgt gacgtgaacg tgcggctgcg ccgcctgccg
      841 aagtcgctcg acggcctcac gatcgtgcag ctcacggacg ttcacgtggg gccgaccatc
      901 ggacgcgcct tcatcgagga catcgtggcg cgcacgaacg ccgtgtcgcc cgacgtgatc
      961 gcgatcacgg gcgacctcgt cgacggctcg gtcgaggatt tgcgcgctgc cgtcgcgccg
     1021 ctcgccgggc tcaaggcgcg ctacggcgtg tacttcgtga cgggcaatca cgaatattat
     1081 tcgggcgcgc cggagtggtg cgccgaaatc gaacggctcg gaatccgcgt gctccgcaac
     1141 gagcgcgtga gcatcggcaa cggcacggac agcttcgatt tagccggcat cgacgacgcg
     1201 cacgcgcatc agttcggcga aggtcacggt cccgatctcg gccgcgccgt cgcgggacgc
     1261 gatccggcgc gggagctcgt gcttctcgcg caccagccgc gggccgtgtt cgaggcggcc
     1321 gagcacggcg tgggcctgca gctgtcgggt catacgcacg gcgggcagat ttggccgtgg
     1381 aactacgcgg tccgcttgca gcaacccgtc gtgcgcgggc tcgcccgctt cggcgaaacg
     1441 caggtgtacg tgagctcggg taccggttac tggggcccgc cgatgcggct cggtgcgccc
     1501 gcggagatca cgcgcgtgac gctccgcacg acctgatcat gcggcggaag gggccggttc
     1561 acgcgcgggc gtacgttctg accgcttccg ccactccttg cccgccgaaa tcgcgacgac
     1621 gagcagcggc gtcgaaaacg tgaggccgag cga
//
LOCUS       DATIML010000304         2161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_927128, whole genome shotgun sequence.
ACCESSION   DATIML010000304 DATIML010000000
VERSION     DATIML010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927128"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..960
                     /locus_tag="VLJ38_05300"
     CDS             <1..960
                     /locus_tag="VLJ38_05300"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSU38959.1"
                     /translation="AVAVFIVLSGYCLMLPLVRERPERLTPAFGVFLRRRALRILPPY
                     FVALFGSLLLIYGVGPLRTGNTGTMWDDSLPALELGPILSHVALVHNWTPGFTHRING
                     PLWSVATEWQIYFCFPLLLLPVWRRFGMPGALAAAALCGYAPLLIAPEAAASAVSWYL
                     VLFTFGMSAAAVGFSSDERRPLDAAWPWSIIAAGSWALCGAFALGAATIWFRLKPLTD
                     VLIGFATAATLVYLTGRAATETRGVPLRLLESKPLVAIGHFSYSLYLTHLPVVALLWR
                     ALAPLGVSPLVNAWVLLGVSTLASLAVAYVFHRAIERPSMAWR"
     gene            complement(1031..1885)
                     /locus_tag="VLJ38_05305"
     CDS             complement(1031..1885)
                     /locus_tag="VLJ38_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU38960.1"
                     /translation="MSKSARVGLALLALTAIMISLSPVFERFFGRRRLRFPYLSRPIT
                     DSAYDALAARPGWAKTKLEVAHGITLNGLIRRPASPSAPWVLYYPGNDASQLTEGQAF
                     LLRLAGDRDYGMAVFAYRGYDSSSGTSSLAGIAADAPEIFLRLCAAEHLPPERVHVLG
                     FSIGGHFAVRAVRGASAQNRRPRTLTLLASVNDIVMYPRSAWEKLSPGEDYQTAPLLA
                     DVPAPVLVLQGSGDKAFGGPGQGRAIAAALGARATYHELPDVDHVALLSDATALDFVR
                     QFVAEHTP"
     gene            complement(1878..>2161)
                     /locus_tag="VLJ38_05310"
     CDS             complement(1878..>2161)
                     /locus_tag="VLJ38_05310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002408090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HSU38961.1"
                     /translation="IGDRVTIEPGVMILTSTHELDSPAHRAGPLTSKPVTIGDGAWIR
                     ARSIILPGVTIGEGAIVDAGAVVNKNVDAHTRVGGIPANKLEALGDAHV"
BASE COUNT          299 a          733 c          749 g          380 t
ORIGIN      
        1 gccgtcgccg tcttcatcgt gctctccggc tactgcttga tgctcccgct cgtccgcgag
       61 cgccccgagc ggctgacgcc agctttcggc gtatttctac ggcggcgcgc gctgcgcatc
      121 ctgccgccct acttcgttgc gctgttcggt tcgctgctcc tcatctacgg cgtgggtccg
      181 ctccgcaccg gcaacaccgg cacgatgtgg gacgactcgc tgccggcgct cgagctcggg
      241 ccgattcttt ctcacgtcgc gctcgtccac aattggacgc cgggcttcac gcatcgcatc
      301 aacggcccgc tctggagcgt cgcgacggag tggcagatct atttctgttt tccgctgttg
      361 ctcctgcccg tgtggcggcg cttcggcatg cctggagcgc tcgccgcggc agcgctctgc
      421 ggctacgcgc cacttctgat cgcgcccgag gcggcggcga gtgccgtctc ctggtacctc
      481 gtgctcttca cgttcggcat gagcgccgcg gcggtcgggt tctcgagtga cgagcggcgc
      541 ccgctcgacg cagcctggcc gtggagcatc atcgcggcgg ggagctgggc gctgtgcggc
      601 gccttcgcgc tcggcgcagc gacgatttgg tttcggttaa agccgctcac cgacgtgctg
      661 atcggtttcg ccacggcggc gacgctcgtg tacctcacgg gacgcgcggc gacggagacg
      721 cgcggcgtgc cgctgcggct gctcgaatcg aagccgctcg tggcgatcgg gcacttctct
      781 tacagcttgt atttgacgca cctgccggtc gtagcgctgc tatggcgcgc gctcgcgccg
      841 ctcggcgtct cacccctcgt gaacgcgtgg gtgctgctcg gcgtgagcac gctcgcgtcg
      901 ctcgccgtag cgtacgtttt tcatcgggcg atcgagcggc cgtcgatggc gtggcgctga
      961 cgtgacacga cgcgcgtcac cttaccgcgg agcggacgac accagctccc atcacggcgc
     1021 gtgctcgcca tcacggcgtg tgctcggcca cgaattggcg cacgaaatcg agtgccgtcg
     1081 cgtccgagag caacgccacg tgatccacgt ccggcagctc gtggtacgtc gcgcgtgcgc
     1141 cgagcgccgc cgcgatcgcc cgaccttgcc ccggcccgcc gaacgccttg tcccccgagc
     1201 cctggagtac gagcacgggc gccggcacat cggcgagcaa cggtgccgtc tggtaatcct
     1261 ccccggggct cagcttttcc caagccgagc gggggtacat gacgatgtcg ttgacgctcg
     1321 cgagcagcgt gagcgtccgc gggcgccggt tctgcgcgct agcaccgcgg acggcgcgta
     1381 cggcgaaatg gccgccgatc gagaagccga gcacgtgcac gcgctcgggc ggtaaatgct
     1441 ccgcagcgca gaggcgcaaa aagatttccg gcgcgtccgc ggcgatgccg gcgagcgagc
     1501 tcgttccgct cgacgagtcg tagccgcggt aagcaaacac ggccatgccg tagtcgcgat
     1561 cgcctgcgag ccgtagcaag aaggcttgtc cctcggtgag ctgggaggcg tcgttgcctg
     1621 gatagtagag gacccacggc gcgctcgggc tcgcggggcg gcgaatcaag ccgttcagcg
     1681 tgatgccgtg cgcgacctcg agcttcgttt tggcccagcc ggggcgggcg gcgagcgcgt
     1741 cgtaggcgct gtccgtgatg ggtcgtgaca agtagggaaa ccgcagccgg cgccggccga
     1801 agaagcgttc gaacacaggg gacaacgaga tcatgatggc cgtgagcgcg aggagtgcca
     1861 agccgacgcg cgcggattta gacatgcgcg tccccgagcg cttcgagctt gttcgcgggg
     1921 atgccgccga cgcgcgtgtg ggcgtcgacg ttcttgttca cgacagcgcc cgcgtcgacg
     1981 atggcaccct cgccgatcgt cacgccgggc aggatgatgg agcgtgcgcg gatccacgcg
     2041 ccgtcgccga tcgtcacggg tttcgaggtc aacggacctg cgcggtgcgc cggcgaatcg
     2101 agctcgtgcg tgctcgtgag aatcatgaca cccggctcga tcgtcacccg gtcgccgatc
     2161 g
//
LOCUS       DATIML010000305         1949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4683979, whole genome shotgun sequence.
ACCESSION   DATIML010000305 DATIML010000000
VERSION     DATIML010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4683979"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..1179
                     /locus_tag="VLJ38_05315"
     CDS             25..1179
                     /locus_tag="VLJ38_05315"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU38962.1"
                     /translation="MALKCLAVRTTLDEHAVRRLKDEVQLARRVTHRHVCRVFDVGFH
                     VSRTPGGPDVTMPFLTMELLRGATLRQRVRDGAGVTPAEALSLFEQLAAGVDAAHDAG
                     VVHADLKSENVMLVEDGAETRAVITDFGLAKRLDAAALQRAGSGTSIAGTMGYMAPER
                     LAGGAASPAADIYALGVILFELLVGRLPFAPDAVVAAALARRPLEATESTLSALPRGY
                     APAIARCLAKDPRHRFERASDIVPAVRQASRDGRHRRHVAAAIVLGASSMGSVAVLAR
                     DAMRPEPIHPVPSAEARPRGAPLEGEPAPVAASRATEASAQKPATIATFADAPPPQKT
                     RSRRGAARAGTAAAVATASAPNVVKPPGEDDLVDPFARTARPPSGSGARP"
     gene            1236..>1949
                     /locus_tag="VLJ38_05320"
     CDS             1236..>1949
                     /locus_tag="VLJ38_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38963.1"
                     /translation="MEAHAQSAEAGSPSSDPAARAEYEHALALYQQGQYAAAIAPLRR
                     AYELYPSPELLYDLAQAQRLAGDCAGALVSYRAFVATEPEEPLRSRADAKLLEMERCV
                     EQARVSNPAPANSAASAPVAREALSAEPASVTPASMRATVSPAVTHGSAAHDRTPYVV
                     ALAAVSLGAFAVSGVAYATYSAKNHDAEAVCPHSPPETCAESDVARHNELVREARTAR
                     AITYAGLGTGVAAAVASLAL"
BASE COUNT          283 a          708 c          671 g          287 t
ORIGIN      
        1 accgacgagc tcctcggtga acggatcgcc ctgaaatgcc tcgcggtccg tacgacgctc
       61 gacgagcacg ccgtccgccg tctcaaggac gaggttcagc tcgcgcgccg ggtcacccac
      121 cgccacgttt gccgcgtttt cgatgtcggc tttcacgtga gccgcacgcc cggcggtccc
      181 gacgtgacga tgccttttct cacgatggag cttctgcgcg gtgcgacgtt gcgccagcgg
      241 gtgcgagacg gtgcaggcgt gacgcccgcc gaagcgctct cgctgttcga gcagctggcc
      301 gccggcgtcg acgcggcaca cgacgccggt gtggttcacg ccgatctgaa gagcgaaaac
      361 gtgatgctcg tcgaagacgg agcggagacg cgcgccgtga tcacggattt cggtctcgcg
      421 aagcgcctcg atgcggcggc gcttcagcgg gcgggtagcg gcacttccat cgccggcacg
      481 atgggataca tggcgcccga gcggctcgca gggggcgccg cgagccccgc cgcggacatt
      541 tacgcactcg gggtcatcct gttcgagctc ttggtcggcc ggctcccgtt cgcgcccgac
      601 gctgtcgtcg ccgcggccct cgcgcgccga ccgctcgaag cgaccgagtc cacgctgagc
      661 gcgttgcctc gcggctacgc gcccgcgatc gcgcgctgcc ttgcgaagga tccgcgtcac
      721 cgcttcgagc gagcgtcgga tatcgtgccg gccgtgcgtc aagcgagtcg cgacggccgg
      781 caccggcggc acgtcgcggc cgctatcgtc ctcggcgcct ccagcatggg ctcggtggcc
      841 gtgctggccc gggacgccat gcgcccagaa ccgattcacc ctgtcccttc ggcagaggct
      901 cggcctcggg gtgcgcctct cgagggcgag cccgcgcccg tggcggccag tcgcgccacc
      961 gaggcctccg cgcaaaagcc ggcgacgatt gccaccttcg cggacgctcc accaccgcag
     1021 aagacacgaa gccggcgcgg cgccgcgcgt gcgggtacgg cggcggcggt ggccacggct
     1081 tccgcgccga acgtcgtcaa accgcccggc gaagatgact tggtcgatcc tttcgcccgg
     1141 accgctcgcc cgccgagcgg ctcgggagcc cggccgtgac acgggaaagc tcgctccgcg
     1201 ccgcggcgtc ctgcctttgc gtaatgctct gggcgatgga ggcacacgca caatcggcag
     1261 aggccggttc gccgtcgagt gatccggccg cgcgcgcgga atacgagcac gcgctcgcgc
     1321 tctatcagca gggacaatat gccgcggcca tcgcgccctt gcgacgagca tacgagctct
     1381 acccgtcgcc cgagctcctc tacgatttgg cgcaggcaca aagacttgcg ggcgattgcg
     1441 ccggagcgct cgtttcctat cgcgcgttcg tcgccacgga gccggaagaa ccgctgcgtt
     1501 cgcgcgcgga cgccaagttg ctcgagatgg agcgctgcgt cgagcaggcg cgggtctcga
     1561 acccggcccc cgcgaacagc gcagcgagcg ccccggtggc gcgggaagca ctctcggcag
     1621 agcccgcgtc cgtcacgccg gcatcgatgc gcgccaccgt atcccctgcg gtgacgcacg
     1681 ggtccgccgc tcacgaccgc acgccgtacg tcgtcgcgct cgctgcggtg tcactcggcg
     1741 cattcgcggt gagcggcgtc gcttacgcga cctactcggc gaaaaaccac gacgctgaag
     1801 ccgtctgccc gcactcgccg cccgaaacgt gtgcggaaag cgacgtggcg cggcacaacg
     1861 agctcgtgag ggaagcgcgt acggcgcgtg ccatcactta tgcgggcttg ggcacgggcg
     1921 tagcagcggc cgtcgcgagc ctcgccctc
//
LOCUS       DATIML010000306         5486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_62135, whole genome shotgun sequence.
ACCESSION   DATIML010000306 DATIML010000000
VERSION     DATIML010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5486
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62135"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..897
                     /locus_tag="VLJ38_05325"
     CDS             <1..897
                     /locus_tag="VLJ38_05325"
                     /inference="COORDINATES: protein motif:HMM:NF015909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38964.1"
                     /translation="RASERAVRETSTALAPWTVIEASDARYRDVEAARALLAALERRL
                     AAPRPERRVEPEAATAPARTILDTLDFSTRAPKDDYERRMPELQARLNRLATKLERKR
                     RSAIFLFEGPDAAGKGGAIRRVIWALDAQQYRVMPVAAPTEEERSHHYLWRFWRQLPR
                     RGRITIYDRSWYGRVLVERVEGLATREEWSRAYREINEFERELVDDGTVLVKFWLHVT
                     SAEQLRRFEAREREPWKQHKISAEDYRNRRHEQLYEAAASEMFERTSTEYAPFELVPA
                     DDKRGARLHVLETICRRLEAEL"
     gene            960..1397
                     /gene="trxA"
                     /locus_tag="VLJ38_05330"
     CDS             960..1397
                     /gene="trxA"
                     /locus_tag="VLJ38_05330"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HSU38965.1"
                     /translation="MNRRCAACGQENRVPARHLAHAGRCGACKAPLPPVSEPLDVDEQ
                     TFDEIVAQAEVPVLVDFWAAWCGPCRMVAPELKKAAARLAGKAVVLKVDTDKHPGLSA
                     RFSVQSIPSFAVFSGGRRVSQQAGAMNQDRLVALVAIARTCAA"
     gene            complement(1428..1988)
                     /locus_tag="VLJ38_05335"
     CDS             complement(1428..1988)
                     /locus_tag="VLJ38_05335"
                     /inference="COORDINATES: protein motif:HMM:NF024135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HSU38966.1"
                     /translation="MRILVAYATRHGQTEEIARRIAAELGEEGHTAELRDLDGAGKTV
                     DLSRYRAAIVAAPIHAGGYPPSVLSFLRREHARLNELPSAFVSVGLAIASKTSDGRAQ
                     TLPHVQKLCERTGFRPAHTELVAGALKYSRYGFLLRYVMRRIAAHEGGDTDTSRDYEY
                     TDWTALAEFTRAFVARLAFVARAPAA"
     gene            complement(2166..2966)
                     /locus_tag="VLJ38_05340"
     CDS             complement(2166..2966)
                     /locus_tag="VLJ38_05340"
                     /inference="COORDINATES: protein motif:HMM:NF014623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RMD1 family protein"
                     /protein_id="HSU38967.1"
                     /translation="MSLGPHVFHAIAFVENIPLKELAPTYPEARRTMHELSFAVSPEA
                     DGTPQGQVFIYPFGAIVFADVPKVQREAELARLSAARRGLTEAAATEDITVCEDRGQK
                     PVVAGGMLTLDRLTPGRASVVALTVAQSAAMEYYERIVDEMSVRTDRIVQGLEARGTV
                     SLRTRPLHRFIGAATSTRNEVLNILHLLDKPDEAWDDPGMDRIYDELKAEFDLGDRYG
                     ALEAKLRSVQESLGLVLDVARDRRIVLLETTVVLLILLELVIAVARLG"
     gene            3008..3841
                     /locus_tag="VLJ38_05345"
     CDS             3008..3841
                     /locus_tag="VLJ38_05345"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HSU38968.1"
                     /translation="MRRLRALVFCAASLSAASSSAALPKGGRFSVITYNVAGLPEGIS
                     ESHPAANLPVVGERLNHFDLALVQEDFAYADSLRLRLKLPFQSRPFVRGARYDFGDGL
                     SLFSRFRFSEPERTAWSSCHGVTSDYFDCLTPKGFSVTTLELAEGVPLDVYDVHLDAG
                     YSDGDRSARSSQLEQLAAAVLAHSAERAVLVGGDFNLEPSELGKLERLEHATGLADAC
                     SALQCSDMKRIDRVLYRGSTTLRVVPTAWRVAPGFIDAHGAALSDHDPVLVDFRWQRG
                     R"
     gene            complement(3844..4317)
                     /locus_tag="VLJ38_05350"
     CDS             complement(3844..4317)
                     /locus_tag="VLJ38_05350"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSU38969.1"
                     /translation="MPEATPLPDFFGRLTTVRSQHEHLGATLRNLEAASDALEIGRTS
                     FPAELSPGALLTALRGDLAQHFEAEESDVHFGTIAREEPRLLPGIVDLKGDHAAMLAS
                     IDGLLLVAADQSRWLELVVPIRRLIRALRVHERAEALLLQESFGRGDVEARAAGL"
     gene            4553..>5486
                     /locus_tag="VLJ38_05355"
     CDS             4553..>5486
                     /locus_tag="VLJ38_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA hydrolase/transferase C-terminal
                     domain-containing protein"
                     /protein_id="HSU38970.1"
                     /translation="MYDPHWQDRYQSRITTAARAISHIAPGRRILVGSGAAEPTTLVA
                     ALAEYGEHLTDNDIVHLLTLGPAPYVRPEFARRFRHTAFFIGPNTREAVQAGRADFMP
                     VFLSEIPRLIRSRRVRIDVALLQVTPPDRHGQVSLGVSVDVVRAAVDSADLVIAEVNP
                     AMPRTFGDSIVRVDDIDWLVPVSTPIQELACEPLDETSLAIGRHVASLVPDGATLQTG
                     IGKIPHAIVRALAGRQDLGVHTEMLSDSMMDLVESGVVTGRKKTLLPGKIVTSFVMGT
                     QKLYAWVDDNPSVELRPSDFTNDPFVIARNDDMIA"
BASE COUNT          881 a         1862 c         1812 g          931 t
ORIGIN      
        1 cgcgcttccg agcgcgcggt gcgcgaaacg agcaccgcgc tcgcgccttg gacggtgatc
       61 gaggccagcg acgcgcgcta ccgggacgtc gaggccgctc gagcgctgct cgcggcgctg
      121 gaacgacgcc tggcagcgcc gcggcccgaa cggcgcgtcg agccggaagc agcaacagcg
      181 cccgctcgca ccatcctcga cacgctcgac ttttcgacgc gcgccccgaa ggacgactac
      241 gagcgccgca tgcccgagct ccaggcgcga ctcaaccggc tcgcgaccaa gctcgagcgc
      301 aagcggcgca gcgctatctt cttattcgaa gggcccgacg ccgccggcaa gggcggcgcg
      361 atccggcgcg tgatctgggc gctcgacgcg cagcaatatc gcgtgatgcc cgtggccgcc
      421 ccgaccgaag aggaacgctc gcaccactac ctttggcgct tctggcggca gctaccgcgg
      481 cgcgggcgca tcacgatcta cgaccgcagc tggtacggcc gcgtgctcgt cgagcgcgtc
      541 gaaggcctcg cgacgcgcga ggaatggtca cgtgcgtatc gcgaaatcaa cgagttcgag
      601 cgcgagctcg tcgatgacgg caccgtgctc gtgaagttct ggctgcacgt cacctccgcc
      661 gaacagctgc gccgcttcga ggctcgcgag cgtgagccct ggaagcagca caaaatctcg
      721 gcggaagact accggaaccg ccgccacgag cagctgtacg aggcagcggc gagcgagatg
      781 ttcgagcgta cgagcacgga gtatgcgccg ttcgagctcg tccccgccga cgacaagcgg
      841 ggcgcgcgac tgcacgtcct cgagacgatc tgtcgccgtc tcgaggctga gctctgacct
      901 agcgttccgc acagtatctg caccttgacg ggcgagcaca cgtgctcaga ttggggggca
      961 tgaatcggcg ttgtgcggcc tgcggccaag agaatcgcgt gccggcgcgg catctcgccc
     1021 acgcgggccg atgcggcgct tgtaaagctc ccctaccccc cgtctcggag ccgctcgacg
     1081 tcgacgagca aacgttcgac gagatcgtcg ctcaagccga ggttcccgtg ctcgtcgact
     1141 tctgggcggc ctggtgcggg ccttgtcgca tggtcgcgcc ggagctcaag aaggccgctg
     1201 cacgcctcgc gggcaaggcc gtcgtgctca aggtcgacac ggacaagcac ccgggtctct
     1261 cggcgcgctt ttcggtgcag agcatcccga gttttgcggt gttctccggc ggccgtcgcg
     1321 tgagccagca agccggagcc atgaatcagg accggctggt cgcgctcgtc gcgatcgctc
     1381 gaacgtgcgc ggcctagccc tgttcctcgg tattagtcac gcgccgttca ggcggctgga
     1441 gcgcgcgcga cgaatgctag ccgcgccacg aaggcgcgcg tgaactcggc gagggcggtc
     1501 cagtcggtgt actcgtagtc gcggctcgtg tcggtgtcgc cgccctcgtg agcggcgatg
     1561 cgacgcatga cgtagcgcag caaaaagccg taccggctgt acttcagcgc gccggcgacg
     1621 agctcggtgt gcgccggccg aaatcccgtg cgctcgcaga gcttctgcac gtgcggcaac
     1681 gtttgcgcgc gaccgtcgct cgtcttgctc gcgatcgcga gcccgaccga cacgaaggcc
     1741 gagggcagct cgttcaagcg cgcgtgctcg cgccgcagaa agctcaggac ggacggcggg
     1801 tagcctccgg catgaatggg cgcggcgacg atggccgccc ggtagcgcga aaggtcgact
     1861 gttttgccgg cgccgtcgag atcacggagt tcggcggtgt ggccttcctc gccgagctcg
     1921 gccgcgatgc gtcgtgcaat ttcttccgtt tggccgtgtc tcgtggcgta cgcaacgagg
     1981 atccgcatgg tgttctcctt tcccggcaag aggcaaagcg agtgccacgt tcggcgcgcc
     2041 gagtttccgg aatttgtggc ccgttgggcc gagggtcctt cgccacgctc gcaggtcttg
     2101 cgtagcgagg catcgaagca cgcagcgttt gcgcgaagct cgcgaagccg aggacaagca
     2161 ccgcgtcagc cgagacgagc gacggcgatg acgagctcga gtagaatcag gagcacgacg
     2221 gtggtttcga gcagcacgat gcgccggtcg cgcgcgacgt cgagcacgag cccgagcgac
     2281 tcttgcacgc tccggagctt cgcttcgagc gcgccgtagc ggtcgcccaa gtcgaactcg
     2341 gccttgagct cgtcgtagat gcggtccatg ccggggtcgt cccaagcttc gtcgggcttg
     2401 tcgagcaggt gcaagatgtt gagcacttcg ttgcgcgtgc tcgtcgccgc cccgatgaaa
     2461 cggtggagcg gccgcgtgcg gagcgacacg gtgccgcgcg cttccaggcc ctgcacgatg
     2521 cgatcggtgc ggacgctcat ctcgtcgacg atacgctcgt agtattccat ggcggcgctc
     2581 tgcgcgaccg tgagcgccac gacgctcgcc cgccccggcg tgagccgatc gagcgtgagc
     2641 atgccgcccg cgactacggg tttttggccg cgatcttcgc acaccgtgat gtcttcggtg
     2701 gccgcggcct ccgtgagccc gcgacgcgcc gcgctgagcc gtgcgagctc ggcttcgcgc
     2761 tgcactttgg gcacgtcggc aaacacgatg gcgccgaacg gatagatgaa cacctggccc
     2821 tgcggcgtgc cgtccgcctc gggcgacacc gcgaaggaca gttcgtgcat cgtgcgccga
     2881 gcctccgggt aagtcggggc gagctctttg agcgggatgt tctcgacgaa ggcgatggca
     2941 tgaaagacgt gtggcccgag agacatggcc tggtcgattc tcatcgttct gctaatacaa
     3001 gagcaaggtg cgacgccttc gcgctttggt cttttgcgca gccagcctgt cggcggcctc
     3061 gagctctgct gcgctcccga aaggcggccg tttcagcgtc atcacctaca acgtggcggg
     3121 attgccggag ggcatttccg agtcgcatcc cgcggccaat ttgccggtcg tcggcgagcg
     3181 gttgaaccac ttcgaccttg cgctggttca ggaagacttc gcctacgctg actcgcttcg
     3241 cctgaggttg aagctgccct tccaatcgcg gcctttcgtc cgcggcgcgc gctacgactt
     3301 cggtgacggc ctgagcctct tctcccgttt ccgtttcagc gagcccgagc ggacggcgtg
     3361 gtcgagctgc cacggcgtaa cgagcgatta cttcgattgc ctgacgccca agggcttcag
     3421 cgtcacgacc ctcgagctcg ccgagggcgt cccgctcgac gtttacgacg tgcacctcga
     3481 cgccggctac tccgacggcg accggagtgc acgcagctcg cagctcgagc aattggccgc
     3541 ggcggtcctc gctcactcgg ccgagcgggc ggtgctcgtc ggcggcgatt tcaatctcga
     3601 gccgagcgag ctcggcaaac tcgagcggct cgagcacgcg accggcctag cggacgcctg
     3661 ttcggcgttg cagtgcagcg acatgaagcg catcgaccgc gtgctttacc gcggctcgac
     3721 gacgcttcga gtcgtgccca cggcatggcg cgtcgcaccc ggcttcatcg acgcccacgg
     3781 cgccgcgctc tccgaccatg accccgtgct cgtcgatttt cgctggcagc gcggcagata
     3841 acttcaaagg ccggcggctc gagcctccac gtccccgcgg ccaaaagact cctgcaggag
     3901 caaggcttcc gccctctcgt gcacccgtag agcccggatc aaccgccgga tgggaacgac
     3961 gagctcgagc cagcgtgatt ggtccgcagc cacgagcaag agcccgtcga tcgaggccag
     4021 catggccgcg tgatcgccct tcaagtcgac gatcccgggc aagagtcgcg gctcctcccg
     4081 agcgatcgta ccgaaatgca cgtccgactc ttcagcctcg aagtgttggg cgaggtcgcc
     4141 gcgcaacgcc gtgagcaatg cccccgggct caactcggcc gggaacgacg tgcgcccgat
     4201 ttctaaggca tcgctcgcag cctccaggtt gcggagcgtg gcaccgagat gctcgtgctg
     4261 actgcggacg gtggtgaggc gtccaaagaa atcgggcaac ggtgtagctt ctggcatgcg
     4321 acggctcctc tcggcgtctg caatcggcgt tcggtgcaca cggcatgccg tctttcgcag
     4381 gcgacttcgc gaggccgaaa tcaggggctg cctttgcagc gcgcgtgcgg acgtgcgcaa
     4441 actgtgcgcg ccgcgcgctc tcctgcgcga ttcatgcgcg atgcgctagc gcgttcgcgg
     4501 ccctattctg ctggtccggg agttgctccg gcagcctcga ctcgagatct tcatgtacga
     4561 ccctcattgg caagatcggt atcagagccg catcacgacc gccgcccggg ccatttcaca
     4621 catcgcgccg ggccggcgca tcctcgtcgg ctccggagcg gccgaaccga ccacgctcgt
     4681 cgctgcactc gccgagtacg gcgagcatct caccgacaac gacatcgtcc atctcctgac
     4741 gctcggtccc gcgccctacg tccggcccga gttcgcgcgg cgcttccggc acacggcgtt
     4801 cttcatcggt ccgaacacgc gcgaggccgt tcaagccggc cgcgccgatt tcatgccggt
     4861 ctttctctcc gagatcccac gtctgattcg ctcgcgccgg gtgcgcatcg acgtggcgct
     4921 cctgcaagtg acaccgcccg atcgacacgg ccaagtgagt ctcggcgtct cggtggacgt
     4981 cgtgcgcgcc gccgtggact cggccgatct cgtgatcgcc gaagtcaatc cggcgatgcc
     5041 tcgcaccttc ggcgattcga tcgtgcgggt cgacgacatc gattggctcg tgccggtctc
     5101 gacgccgatt caggagctcg cgtgcgagcc gctcgacgaa acgagcctcg ccatcggccg
     5161 ccacgtcgcg agcctcgtgc cggacggcgc tacgctgcaa accggcatcg gcaagatccc
     5221 gcacgctatc gtgagggcgc tcgcgggccg ccaggatctc ggtgtgcaca ccgaaatgct
     5281 ctccgacagc atgatggacc tggtcgagag cggggtcgtg accggccgca agaagacgct
     5341 cttgcccggc aagatcgtca cttccttcgt gatgggcacg cagaagctct acgcttgggt
     5401 cgacgacaat ccgagcgtcg agcttcgccc gagcgatttc acgaacgacc cgttcgtcat
     5461 cgccaggaac gacgacatga tcgcgg
//
LOCUS       DATIML010000307         3603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5549070, whole genome shotgun sequence.
ACCESSION   DATIML010000307 DATIML010000000
VERSION     DATIML010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3603
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5549070"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2191
                     /locus_tag="VLJ38_05360"
     CDS             <1..2191
                     /locus_tag="VLJ38_05360"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU38971.1"
                     /translation="ADVFAQAERVPETVARRIEALPGVATVQTRVAKDVTLPIEGLPH
                     PAYGRMLSLPPAGVATTNAIYLKKGRLPERDDELVLLEAFAEAYGLEPGHHVPVVVNG
                     KRRSFRVAGIAMSPEFVYAIRPGALVDDPKRHAVLWMQRSALASAFQLGGAFDDVSLK
                     LAPGASEKSVREGLDRLLLPFGGNGSIGRKDQISNRIVSQELDQLGVLSTMVPAVFVG
                     VTAFLVNLVLGRMIRLQRPEIATLKAIGYANAEIGRHYLGLVFVVLLPGSVLGLVGGV
                     TLGHLVLGLYGTTFRFPNLEFHLSVGLVATAVVVSAIAALAGAWGAVRSAVRLPPAEA
                     MQPPAPARYRRSVVERLGVSALIGTSGMMVLREITRRPLRTLLSSLGIAGAVSLLILS
                     HFGLDSLINYFEGTFRREQRQDLAVVFARPVAPAVVAELARVPGVLTAEGVRAVPVRI
                     RHEHRARDSVMMGLPAPNTLRRLVGHGGPEVAVPVDGVVLTKTLGDVLGLRIGDRPEV
                     EVREGDRRTVRPVVVAFVDESVGMSIYAQAGTLAALEGDLGAVSSVLLKVDPLRAAEV
                     DAELRRSPSIIDVSDASGDMQRMLDMNTSFMNVWTAISIMLSAGVVFGVVYNNARIGL
                     AARARDLASLRVLGFTRGEISWILLGNQAIEVALAVPLGLWLGRGWARQFMRTVDQET
                     FRWEVAIAPRTYLLSVVVTLFAAAASALWVRRSLDTLDLVAVLKARE"
     gene            2200..3501
                     /locus_tag="VLJ38_05365"
     CDS             2200..3501
                     /locus_tag="VLJ38_05365"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSU38972.1"
                     /translation="MSGTSSEVLLQSAPSTLPPGALPPADLKSRKSRERRRAIARNVR
                     HAALAAVLLGGCLAAVFALRPQPVPVDTARAVRGPLVVAVEEDGITRVKDRFLVSAPV
                     TGSLSRLSLEPGDTVNAGDALAEIAPATSPLLDERTRAEAEARLGAALSSLGQARAQV
                     SRAKLAKELAEQELARSHRLGESGSISSQAVEQAEFALRMRTEELASAEFGAKVAEEE
                     VRVARVSLGRDGVGASDRHVDVLAPVSGRILRVHQKSAGVVQASAPLLEVGDPAALEV
                     VVDLLTTDAVHVLPGTSVVIRGWGGDQDITGRVRRVEPSAFTRPSPLGVDEQRVNVIV
                     ALMDPHERWSALADGYRVQARIVLWQAARVLKVPQGAVFRRGDGWAVFQIEKASARLT
                     PVTLGHRGDTEVEVERGLDEGAVVAVHPGDRVQDGVRVEPR"
BASE COUNT          488 a         1227 c         1256 g          632 t
ORIGIN      
        1 cgccgacgtc ttcgctcaag ccgagcgcgt gccggaaacc gtagcgcgcc gtatcgaagc
       61 gttgccgggc gtcgcgaccg tgcaaacgcg cgtggccaag gacgtgacgc tcccgatcga
      121 gggcctgccg caccccgcct atggccgcat gctgtcgctg ccgccggccg gcgtcgcgac
      181 gacgaacgcc atctacttga agaagggccg gcttcccgag cgcgacgacg agctcgtcct
      241 gctcgaagcc ttcgccgagg cgtacggact cgagccgggg caccacgtcc ccgtcgtcgt
      301 gaacgggaaa cggcgctctt ttcgcgtcgc cggcatcgcg atgtcgcccg agttcgtgta
      361 cgcgattcgc ccgggggcgc tcgtcgacga tcccaaacgg cacgccgtgc tctggatgca
      421 acgttccgcg ctcgcgtcgg catttcagct cggcggcgcg ttcgacgacg tgtcgctgaa
      481 gctcgcgccg ggcgcttccg aaaaatccgt gcgcgaaggg ctcgaccgtc tgctcttgcc
      541 gttcggcggc aacggttcga tcgggcgcaa agaccagatt tcgaatcgca tcgtctccca
      601 agagctcgat cagctcgggg tgctctcgac gatggtgccg gccgtgttcg tcggcgtcac
      661 ggcgttcctc gtgaacctgg tgctcggtcg catgatacgg ctgcagcggc ccgagatcgc
      721 gacgctcaag gccatcggct atgccaacgc cgagatcggg cggcactacc tcggcctcgt
      781 cttcgtcgtg ctcttgcccg gcagcgtcct cggtctcgtc gggggcgtca cgctcggaca
      841 tctggtgctt ggcttgtacg gaacgacgtt ccggtttccg aacctcgagt ttcatctgag
      901 cgtggggctc gtcgcgacgg ccgtggtcgt gagcgcgatc gcggcgctcg caggcgcttg
      961 gggcgccgtc cgctcggccg ttcgcctgcc acccgccgag gccatgcagc caccggcgcc
     1021 ggcccgctat cgacgcagcg tcgtcgaacg gctcggtgtg agcgccctga ttggcacgag
     1081 cggcatgatg gttctgcgcg agatcacgcg ccggccgctc aggactctcc tctcgtcgct
     1141 cgggatcgca ggcgccgttt cgttgctgat tttgagccat ttcgggctcg actcgctgat
     1201 caactacttc gagggcacgt ttcggcgcga gcagcgacag gatctggcgg tcgttttcgc
     1261 caggccggtc gcgcccgccg tcgtcgccga gctcgctcgc gtgccgggcg tgctcacggc
     1321 cgaaggggtt cgcgccgtgc ccgtgcgcat ccgtcacgaa caccgcgctc gcgattccgt
     1381 catgatgggc ttgccggcgc cgaacacgct acgccggctc gtcggccacg gcggccccga
     1441 agtcgcggta cccgtcgacg gcgtcgttct gacgaagacg ctcggcgacg tgctcggcct
     1501 ccgcatcggt gatcgcccgg aagtcgaggt gcgcgaaggc gatcggcgaa cggtccggcc
     1561 cgtcgtcgtc gccttcgtgg acgagtcggt cggcatgtcg atctacgcgc aggccgggac
     1621 gctcgcggcg ctcgaggggg atctcggtgc cgtttcgtcc gtgttgctca aggtggaccc
     1681 gctgcgggcg gccgaggtcg acgccgagct ccgtcgctcg ccgagcatca tcgacgtgtc
     1741 cgacgcgagc ggcgacatgc agcgcatgct cgacatgaac acttcgttca tgaacgtgtg
     1801 gacggcgatc tcaatcatgc tctccgcggg cgtcgtcttc ggtgtcgtct acaacaatgc
     1861 gcgcatcggt ctcgccgccc gcgcccgtga cctcgcgagt ctgcgcgtgc tcggcttcac
     1921 ccggggtgaa atttcctgga ttttgctggg caaccaagcc atcgaggtcg cgctcgccgt
     1981 cccgctcggc ctgtggctcg gcaggggttg ggctcggcag ttcatgcgta cggtcgatca
     2041 agagacgttt cgttgggagg tggcgatcgc gccgcgcacg tacttgcttt ccgtagtcgt
     2101 gacgttgttc gccgccgcgg cgagcgcgct ctgggtgcgt cgcagcctgg atacgctcga
     2161 cctggtggct gtgctcaaag cacgagagtg aggagattca tgtccggcac cagcagcgaa
     2221 gtcttgctcc aatccgcgcc gtccacgctg ccccccggcg cgcttccgcc ggcggatctc
     2281 aagagccgca agtcgcggga gcggcggcgt gccatcgcgc gtaacgtgcg gcacgcggcg
     2341 ctcgcggcgg tactgctcgg cggatgcctg gcggccgtat tcgcgctgag gccgcagccg
     2401 gtgcccgtcg atacggcgcg cgccgttcgc ggtccgctcg tggttgccgt cgaagaagac
     2461 ggcatcacgc gcgtgaagga tcggttcctc gtgtctgcgc cggtgaccgg cagtctctcg
     2521 cgcctgtcgc tcgagcccgg cgataccgtc aatgcgggcg acgccttggc cgagatcgcc
     2581 ccggcgacct cgcccttgct cgacgaaagg acgcgtgccg aagccgaagc gcgcctcggc
     2641 gcagccctgt cgtcgctcgg gcaggctcgc gcgcaggtct cgcgcgcgaa actcgccaag
     2701 gagctcgccg aacaagagct cgcccgctcg catcgactcg gcgagagtgg ctcgatttcg
     2761 tcgcaggccg tggagcaggc ggaattcgcg ctgcgcatgc gcacggagga gcttgcgtcg
     2821 gcggagttcg gcgcgaaggt cgccgaagag gaggttcgcg tcgcgcgcgt ctcgctcggg
     2881 cgtgacggag tcggcgcgag cgatcgtcac gtcgacgtgc tcgcgccggt gtccggacgc
     2941 atcttgcgcg tgcaccagaa gagcgccggc gtcgtgcagg cttccgcgcc cctgctcgag
     3001 gtgggcgacc ccgctgcgct cgaggtcgtg gtcgacctct tgacgacgga cgcggtgcac
     3061 gttttgccgg gcacctccgt cgtgattcgg ggctggggcg gcgaccaaga cattacgggc
     3121 cgcgtcaggc gcgtcgagcc gtccgcgttc acgcgcccgt ccccgctggg tgtcgacgag
     3181 caacgggtca acgtcatcgt cgcgctgatg gaccctcacg agcgctggtc cgccctcgcc
     3241 gacggctacc gtgtgcaggc gcgcatcgtg ctctggcagg ccgcgcgcgt gctgaaggtg
     3301 ccgcagggcg ccgtgttccg tcggggcgac ggctgggcgg tctttcagat cgaaaaagcg
     3361 agcgctcggc tgaccccggt cacgctcggc catcgcggcg acaccgaagt agaggtcgag
     3421 cgcggtctcg acgagggtgc cgtggtcgcc gtccatccgg gcgatcgcgt gcaggacggc
     3481 gtgcgcgtcg agccgcgctg atcgaactcg cgcctggcgt ggctcttgct cgtacagcga
     3541 gcatgaccaa gccgatccct cacgtctcca agtacatgac gaccacgccg cgcacggaag
     3601 ggc
//
LOCUS       DATIML010000308         2588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_351841, whole genome shotgun sequence.
ACCESSION   DATIML010000308 DATIML010000000
VERSION     DATIML010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351841"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VLJ38_05370"
     CDS             complement(<1..392)
                     /locus_tag="VLJ38_05370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38973.1"
                     /translation="MSISFRLLSTLAVLGSAFWACAPDLDALSSKYNPNAAGKGGSSG
                     SGTGGSLPGTGGGKPETGGTSAVGGTGGGGTGGTEAGAAGQAGQGDTSGGTGGTGGSS
                     TSGTGGSATSSCSNGSADSNETDVDCGGS"
     gene            complement(893..>2588)
                     /locus_tag="VLJ38_05375"
     CDS             complement(893..>2588)
                     /locus_tag="VLJ38_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38974.1"
                     /translation="ALYCVLRVTDKKLFRTSAAGANEDHATLFLAFPKGQTYEIGLYP
                     GDPGKSPGLVKLRGSAAPGAKLVEAPTEKGYDIEASIPWSAFPEAARQRVGLRAAVRL
                     TDADAGGSVKAVIATSGATAGRALPPFLTSAEAGLDEYLTKEKGLSSNPQREVYGNVS
                     GDGMLERVAVFGPLLSIVGPGFRGGKEFYVGELGIEDASMVTRLELVDFDGDGHDEVV
                     IQKRFGAKDHYREIVTVTKVGRDDQPFQVFAHEVGLKTKDGFIANKVSTRGGTLEIAQ
                     GDSDGFDPGTYDEPTPSDMGGTILPWESVKSKSFKWQGDGIKPAGETTWTPKVTAAKG
                     GPAPKARAPEGPAQPPAPRPPTSDELLDRVYALYKRDRATGNARPRFDFVTDVAGDGG
                     PERVLVHDRDLVVFGKGFRNGTSYAFITVGVADGKDILDATARDLTGDGKAEIIVRGV
                     LHAKASKALGGSSVDRYALFVYGVQGDALVRVFAAETGRAVEKDRVLGDVAFTPGERG
                     ATRIELRPGRAFGWTQKTYPFPEDTTTAGGLEPLLLPWSATSARRYKWDGKAYVAE"
BASE COUNT          410 a          914 c          832 g          432 t
ORIGIN      
        1 gagccgccgc agtcgacgtc ggtttcgttc gagtcggcgc tgccgttgct gcagctcgac
       61 gttgccgagc ctccggtacc gctcgtgctc gagccgcccg tgccgccagt tccgccgctc
      121 gtatcaccct gccccgcttg acccgcggct ccggcttcgg tgccgcccgt cccgccaccg
      181 ccggttccac cgacggcgct cgtgccgcca gtctcgggct tcccgccgcc cgtgccgggc
      241 aagctgccgc ccgtgccgga acccgagcta ccgccctttc cagcggcatt cggattgtat
      301 ttggaggaga gcgcgtcgag atcgggggcg cacgcccaga acgccgatcc gagcacggcc
      361 aaagtcgaga ggaggcgaaa gcttatcgac atgcggagcg ccagagtgaa aggtccatcc
      421 gagatcgctc ggaccgaagt aggcacgcgt cagcgacgcg tccccgacga cctccgaggg
      481 tagcaggacg agtatccatc gcaatactca actttgcgaa cggagcgacg cgagcgacac
      541 ccgcaaacga cgactgctcc gcaccgcgat cacgcgcgcc tacatcgccg aacaccaccg
      601 cgcgctcacc tacatcggct ctgtcgccag acgctgcgca ctcgcgccta cacctcgcgc
      661 gtgctcggcg cgccatcgcg gaaggtcgca tcggttgagt tcgtggctgc atacgttcgt
      721 gctgggcggc gttcagctcg ttcgtcgatc gaaggatcgc tcgagcatca ctacggctct
      781 ccggccgcgc gaatgaagcc ctgatccgga cgtcatgatg gacgtacgaa agctgggaca
      841 aagtgacgcg acttcgctaa gtcgaccgga cgttcacgag ccggctcggt cgctactccg
      901 caacgtacgc cttgccatcc cacttgtagc ggcgcgcgct cgtcgcgctc cacggcaaga
      961 gcaacggctc gagcccgccc gccgtcgtcg tgtcctcggg gaacggatac gttttttgcg
     1021 tccaaccgaa ggcgcgccca ggacggagct cgatgcgcgt cgcgccgcgc tcgcccggcg
     1081 tgaacgctac gtcgccgagc acgcggtctt tctcgacggc gcgccccgtc tcggcggcga
     1141 acacccgtac gagcgcgtcg ccttgcacgc cgtaaacgaa gagcgcgtag cggtcgaccg
     1201 aagagccgcc gagcgctttg ctcgccttgg cgtgcaagac gccgcgcacg atgatttcgg
     1261 ccttgccgtc acccgtgaga tcgcgcgccg tggcgtcgag gatgtccttg ccgtcggcga
     1321 cgccgaccgt gatgaacgcg tagctcgtcc cgttgcgaaa gcctttgccg aaaacgacga
     1381 gatcacgatc gtggacgagc acgcgctcgg ggccgccgtc gcccgctacg tccgtcacga
     1441 aatcgaagcg cggacgcgcg ttgcccgtcg cgcggtcgcg cttgtagagc gcgtagacgc
     1501 gatcgagcag ctcgtcggac gtgggcggac gcggagccgg cggctgagcc ggaccttcgg
     1561 gcgcgcgcgc tttgggtgcg gggccacctt tcgctgcggt gaccttcggc gtccaggtcg
     1621 tctcgccggc aggcttgatg ccgtcaccct gccatttgaa cgatttcgac ttcaccgact
     1681 cccacggcaa gatcgtgcca cccatgtcgg acggcgtcgg ctcgtcgtac gtgcccggat
     1741 cgaagccgtc ggagtcgcct tgcgcgatct cgagcgtgcc gccgcgggtc gacactttgt
     1801 tcgcgatgaa gccgtccttg gtcttgagcc cgacttcgtg cgcgaagact tgaaacggct
     1861 ggtcgtcgcg gccgactttg gtcaccgtga cgatctcgcg atagtgatcc ttcgcgccga
     1921 agcgcttttg aatcacgacc tcgtcgtgac cgtcgccgtc gaagtcgacg agctcgaggc
     1981 gcgtgaccat cgacgcgtcc tcgatcccga gctcgccgac gtagaactcc ttgccaccgc
     2041 gaaacccggg ccccacgatc gagagcaacg gcccgaacac ggcgacgcgc tcgagcatcc
     2101 cgtcgccgct cacgttgccg taaacctcac gctgcggatt cgacgagagc cccttctctt
     2161 tcgtcaaata ttcatcgagc cccgcctcgg cggacgtgag aaacggcggc agcgcacgtc
     2221 cggccgtcgc acccgacgtc gcgatcacgg ctttgacgga cccgccggcg tccgcgtccg
     2281 tgagtcgcac cgccgcgcgc aggcccacgc gctggcgcgc cgcttcggga aacgcgctcc
     2341 acggaatcga cgcctcgatg tcgtagccct tctccgtcgg cgcctcgacg agcttggcac
     2401 caggggcggc gctgccgcgg agcttgacga gcccggggct cttgccggga tcgcccgggt
     2461 aaaggccaat ctcgtacgtc tgacccttgg ggaaggcgag gaagagcgtc gcgtgatctt
     2521 cgttcgcgcc ggcggcgctc gtgcgaaaga gcttcttgtc ggtgacgcgg agcacgcagt
     2581 agagcgcg
//
LOCUS       DATIML010000309         2585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2371417, whole genome shotgun sequence.
ACCESSION   DATIML010000309 DATIML010000000
VERSION     DATIML010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2371417"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..713
                     /gene="fusA"
                     /locus_tag="VLJ38_05380"
     CDS             <1..713
                     /gene="fusA"
                     /locus_tag="VLJ38_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233279.1"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HSU38975.1"
                     /translation="EYNCEVVAGKPQVAYRESITRRAEISYTHKKQTGGSGQYAKIGG
                     YIEPLPADAVETYEFVDEIVGGIIPREFIPACDKGFREGIKKGSLIGFPVVGVRAVLN
                     DGASHAVDSSEMAFKTAALMGFREAYPKARPTILEPIMKVEVEAPVEFQGSVVGQVNQ
                     RRGVILETKSDDVVTITAQVPLNTMFGYSTDLRSATQGKGNYTMEFAHYAPVPKQEQE
                     MMIKEYRERQAKEAAARK"
     gene            821..2581
                     /locus_tag="VLJ38_05385"
     CDS             821..2581
                     /locus_tag="VLJ38_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU38976.1"
                     /translation="MSNDELRQCLATLEALLERREALLELDEPTRKRLLEVAGRLAQP
                     DRAEQRYLARASRRKRKRDVRTADEALLSRAGIRKKRLESVFVTPEPRALVAAGGGVH
                     ATNGAVHALNGAGATNGAGATTNGAETSPHGSAATPHGSVTSPSSAVYTPHASVPALR
                     AAAVDNDDSDDDERLREARVCYVCKKPRDRVHFFYDQLCDACGDFNYEKRTQTADLRG
                     RTALISGARVKIGYQAAILLLRSGARVIVTTRFPRDAARRYAAERDYDDWRERLAIYG
                     LDLRHTPSVEAFARHLTEREPRLDFMLHNACQTVRRPAGFYGHLMDGELGPHERVPEA
                     ARPLLVEHEALTAARRRLHENGADGSSHVAYRAPAPTHDETEPHDPRAMVGLNASAAL
                     SQLALVPEDSERSELIFPRGELDQDQQQIDRRGINSWRLALDEVGTVELLEVQLVNSI
                     APFVLNARLKALMLRERTFDKHIVNVSAMEGQFYRRFKTDKHPHTNMAKAALNMLTRT
                     SAPDYAKDGIFMNSVDTGWVTDEDPAHIAARKTAENGFHPPLDIVDGAARICDPIFAG
                     ELTGEHAFGRFFKDYRPVDW"
BASE COUNT          482 a          924 c          827 g          352 t
ORIGIN      
        1 gcgagtacaa ctgcgaggtg gtcgccggta agccgcaggt cgcttaccgc gagtcgatca
       61 cgcggcgcgc cgagatcagc tacacccaca agaagcagac cggcggctcg ggtcagtacg
      121 ccaagatcgg cggctacatc gaaccgctac cggcggacgc agtagagacg tacgagttcg
      181 tggacgagat cgtgggcggt atcatcccgc gcgagttcat cccggcctgt gacaagggct
      241 tccgcgaggg catcaagaaa ggctctctga tcggcttccc ggtcgtgggc gtgcgcgccg
      301 tgctcaacga cggcgcgtcg cacgcggtcg attcgtccga aatggcgttc aagacggccg
      361 cgctcatggg cttccgtgag gcgtatccga aggcgaggcc gacgattctc gagccgatca
      421 tgaaggtcga ggtcgaagcg cccgtcgaat tccagggctc ggtcgtcggc caggtgaacc
      481 agcgccgcgg cgtgatcctc gagacgaaga gcgacgacgt ggtcacgatc acggcgcagg
      541 tgccgctcaa caccatgttc ggctactcga cggatctgcg ctccgcgacg cagggcaagg
      601 gcaactacac catggagttt gcccactacg cgcccgtgcc gaagcaagag caagagatga
      661 tgatcaagga ataccgcgag cggcaggcga aggaagccgc cgcccgcaag tagtccggct
      721 ttttcgcaag cggcgcgccc agtcgcacgg agatacccgt gcacggcggg gcgcgcccca
      781 gaccgagact cgagttcgct actggcgaac tcgaaccctg atgtcgaacg acgaactccg
      841 tcaatgcctc gcgacgctcg aagcactcct cgagcgccgc gaagcgctgc tcgagctcga
      901 cgagccgacg cgcaagcgcc tgctcgaagt cgccgggcgg ctcgcgcaac cggaccgcgc
      961 cgagcagcgc tacctcgcgc gcgcctcacg gcgtaagcgc aagcgcgacg tgcgcaccgc
     1021 cgacgaagcc ttgctctcgc gcgccggcat tcgaaagaag cgcctcgaaa gcgtcttcgt
     1081 cacgcccgag ccgcgtgcgc tcgtcgcggc gggcggcggc gtgcacgcga cgaacggcgc
     1141 cgttcacgcg ctgaacggcg cgggcgcgac gaacggtgcg ggcgcgacga cgaacggcgc
     1201 ggaaacctcg ccgcacggct ccgccgccac cccgcacggc tccgtaacgt cgccgtccag
     1261 cgccgtctac acgccgcacg cttccgttcc cgcgctgcgc gcggcagcgg tcgacaacga
     1321 cgacagcgac gacgacgagc gcctgcgcga agcgcgcgtc tgttacgtct gcaaaaagcc
     1381 gcgcgaccgc gtccatttct tctacgacca gctctgcgac gcgtgcggcg acttcaacta
     1441 cgagaagcgc acccagaccg cggatctgcg cggccgcacg gcgctcatca gcggcgcccg
     1501 cgtcaaaatc ggctaccagg cggcgatttt gctgctgcgc tccggcgcgc gcgtgatcgt
     1561 cacgactcgc ttcccgcgcg acgcggcgcg ccgctacgcc gccgaacgcg actacgacga
     1621 ctggcgcgag cgcctcgcca tttacggctt ggatttgcgc cacacgccga gcgtcgaggc
     1681 gttcgcgcgg cacctgacgg agcgcgaacc gcgcctcgac ttcatgctgc acaacgcctg
     1741 ccaaaccgtg cgccgcccgg cgggcttcta cgggcacttg atggacggcg agctcggccc
     1801 gcacgagcgt gtgcccgaag ccgctcgccc gctgctcgtc gaacacgagg cgctcacggc
     1861 ggcgcgccgc cgcttgcacg aaaacggcgc ggacggctcc tcgcacgtcg cgtatcgcgc
     1921 gcccgcgcct acccacgacg aaacggagcc gcacgacccc cgcgccatgg tcggcttgaa
     1981 cgcctccgcg gcgctctcgc aactcgcgct cgtcccggaa gacagcgagc gcagtgagct
     2041 catcttcccg cgcggcgagc tcgatcaaga ccagcaacaa atcgatcggc gcggcatcaa
     2101 cagctggcgg ctcgcgctcg acgaagtcgg caccgtggag ctgctcgaag tgcagctcgt
     2161 caacagcatc gcgcccttcg tgctcaacgc gcggctcaag gcgctcatgc tgcgcgagcg
     2221 cacgttcgac aaacacatcg tcaacgtttc ggcgatggag ggacaatttt atcgccgctt
     2281 caagaccgac aaacacccac acacgaacat ggcgaaagcc gcgctcaaca tgctgacgcg
     2341 cacctccgct cccgactacg cgaaggacgg catcttcatg aacagcgtcg acacgggctg
     2401 ggtcaccgac gaagacccgg cccacatcgc tgcgcgcaaa acggccgaaa acggcttcca
     2461 cccgccgctc gacatcgtcg acggcgcggc gcgcatctgc gatccgatct tcgccgggga
     2521 gctgaccggc gagcacgcgt tcggccggtt cttcaaggac taccggcccg tcgactggta
     2581 agagc
//
LOCUS       DATIML010000310         3689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2083093, whole genome shotgun sequence.
ACCESSION   DATIML010000310 DATIML010000000
VERSION     DATIML010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2083093"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1169
                     /locus_tag="VLJ38_05390"
     CDS             141..1169
                     /locus_tag="VLJ38_05390"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HSU38977.1"
                     /translation="MITPMMSRNWRDLIRPKAIQLDPESNSQTYGKFTCEPLERGFGI
                     TVGNSLRRVLLASLQGAAITAVRMEGALHEFTTIPDVVEDVTDIILNLKQVVIKTETP
                     KSYTLRLEKEGPGPVLASDIKTVEGLTILNPNLQVATLDKKGPLVMELSVGVGRGYVP
                     AERNKTPTMPIGTIPIDALFSPIRKVNYAVQNARVGQVTDYDKLVLEVWTNGAVRPVD
                     AVAFAAKILKEQLSIWINFEESEETAYQQTGQDDQPLNENLFRSVDELELSVRSANCL
                     QNANITLIGELVQKSEQDMLKTKNFGRKSLKEIKEILGTMGLGLGMKFDNWPGMLERW
                     KQQQQAQG"
     gene            1173..1613
                     /gene="rplQ"
                     /locus_tag="VLJ38_05395"
                     /pseudo
     CDS             1173..1613
                     /gene="rplQ"
                     /locus_tag="VLJ38_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017042856.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
     gene            complement(1847..2740)
                     /locus_tag="VLJ38_05400"
     CDS             complement(1847..2740)
                     /locus_tag="VLJ38_05400"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HSU38978.1"
                     /translation="MPRPDSMAYLQGLVYRRSGIVLEDGKDYLVDSRLSPVARCEGVE
                     SVDELVDKLRRDRGGELAQRVVEAMTTNETLFFRDAHPFDALRNHFVPELLKARSQER
                     SLRIWSAAAATGQEPYSIAMALLEAFPELASWRVSILATDLNEAVLERARRGRYRALE
                     VSRGLPPSYLSKYFSRVDGDWELSANVRDMVTFRQLNLVEPWFEIAPCDLVFMRNVLI
                     YFDANTKTTVLKRLHSVLRPDGFLVLGGAETTTNLDDSYASVRVGPGVYYQLKTPSPA
                     ESTRGAPRAGDVVSSRTPRVA"
     gene            complement(2740..>3689)
                     /gene="cheB"
                     /locus_tag="VLJ38_05405"
     CDS             complement(2740..>3689)
                     /gene="cheB"
                     /locus_tag="VLJ38_05405"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /protein_id="HSU38979.1"
                     /translation="PDLVLLDVMMPDMDGIKTVRRMRLTHPTMPVIMCSSLTESGADV
                     TLRALAAGATDHVAKPGPGENQFELFRQELLGKVLTLGNASQTPHAADSVEVDVTLIP
                     PAPIAQLPATIQAVAIGCSTGGPNALATLFARLPGDLPVPILIVQHMPKVFTKILADR
                     LTASSSVRVVEATHGMTVEPGRGYIAPGDFHLKIGRANGRIVTLLNQDPPEHSCRPAV
                     DVLFRSLARFYRDGVLACVLTGMGSDGANGAQDLVRAGSKVLAQSAETCVIPSMPAAI
                     VEARLADKVLHLDGLADEIVARVRRSHGQVPRARAQGEA"
BASE COUNT          684 a         1192 c         1271 g          542 t
ORIGIN      
        1 cgtcgaatat tactcacgtt gatcgaagat ttttcttagt tgcttgctgc gggcaggccg
       61 cgggttcgaa cgaggagcgg gttcctcgcc gaaccgggac ggccgcgcaa acgtccgaac
      121 cctgaaggag aaccgaacgc atgattactc ccatgatgag ccgcaactgg cgtgatctca
      181 ttcggcccaa ggcgattcag ctcgatcccg agtcgaacag ccagacgtac ggcaagttca
      241 cctgcgagcc gctcgagcgc ggcttcggca tcaccgtcgg caactcgctc cgccgcgtgc
      301 tgctcgcgtc ccttcagggc gccgccatca ccgccgtccg catggaaggc gcgctccacg
      361 agttcacgac catccccgac gtcgtcgagg acgtgaccga catcatcctg aatttgaagc
      421 aggtggtgat caagacggag acgccgaagt cttacacgct ccgtctcgag aaggagggcc
      481 ccgggcccgt gctcgcgagc gacatcaaga cggtcgaggg tctcacgatc ctgaacccga
      541 acctgcaggt cgcgacgctc gacaagaagg gcccgctcgt catggagctc tcggtgggcg
      601 tgggccgcgg ttacgtgccg gccgagcgca acaagacgcc gaccatgccg atcggcacga
      661 tcccgatcga cgcgctcttc tcgccgatcc gcaaggtgaa ctacgccgtg cagaacgcgc
      721 gcgtcggcca ggtcaccgac tacgacaagc tcgtgctcga ggtgtggacc aacggcgccg
      781 tgcgtccggt cgacgccgtg gcgttcgccg cgaagatcct caaagagcag ctcagcatct
      841 ggatcaactt cgaggagagc gaagagaccg cgtaccagca gacgggtcaa gacgaccagc
      901 cgctcaacga gaacctcttc cgctcggtcg acgagctcga gctctcggtg cgttcggcca
      961 attgcctgca gaacgcgaac atcacgctca tcggcgagct cgtgcagaag agcgagcagg
     1021 acatgctgaa gaccaagaac ttcggccgca aatcgctgaa ggaaatcaaa gagatcctcg
     1081 gcacgatggg tctcgggctc ggcatgaagt tcgacaattg gccaggcatg ctcgagcgtt
     1141 ggaagcagca gcagcaagcg cagggatgag cgatgagaca ccgtaaagcg gggcggcaat
     1201 tcggccgcaa cacgagccac cggcgcgcga tgcttcgcgc gctcacggcg aacctcgtcg
     1261 cgcacgagcg catcgagacc accgacgcca aggccaagga gctgcggcgc gtcgccgagc
     1321 ggctcatcac gaaggcgatc cgcctcggcc ccgtggcgta cacgcctcag aaggatctcg
     1381 gcgtcgccga tcaggcacgc cgccatgcgg cccagatgcg catggggcag ttcctccgcc
     1441 gcttcgggac ggtgaacgac ggcggcgagg agcggcgcgt cgatctgatc gagaaggtgt
     1501 ttctcgatct ggcgcggcgc ttccgcgatc ggcccggtgg ctacacgcgc atcgtgaagc
     1561 tcggccggcg ccgtggcgac aacgcgccga tgtcgctggt cgagttcgtg gagctcggtg
     1621 cgagcgcggg cggagcggcc gaaggcgacg caaagaagtc gaagaaatcg gccaaggcgt
     1681 cggccgaggg cggcgaagcc gagaagagcg gcaaggccga agccagcgac aaggcggaag
     1741 gcgagaagcc ggccgccaag cgcgcgaaga agacggccaa ggccgaatcg gaagagtaag
     1801 cggcgagacg cgacgcgcgg tggcggaaac gtgccgtgcg tcgtcgttac gccacgcgcg
     1861 gcgtgcgcga cgagactacg tcgccggcgc gcggtgcgcc gcgggtggac tcggcgggcg
     1921 acggcgtttt cagctgatag tagacgccag ggccgacacg aaccgacgcg taggagtcgt
     1981 cgaggttcgt cgtcgtttcg gcgcccccga gcacgaggaa gccgtccggg cgtagcaccg
     2041 agtgcaggcg cttgagcacg gtcgtcttcg tattcgcgtc gaagtagatg agcacgttgc
     2101 gcatgaacac gagatcgcac ggcgcgatct cgaaccacgg ctcgaccaaa ttgagctgcc
     2161 ggaacgtcac catgtcgcgg acgttcgccg agagctccca gtcgccgtcc acgcgcgaaa
     2221 agtacttgct gaggtacgac ggcggcagtc cgcggctcac ctcgagcgcg cggtagcggc
     2281 cccgcctggc gcgctcgagc acggcctcgt tcaaatccgt cgcgagaatg gagacgcgcc
     2341 agctcgcgag ctcaggaaac gcttcgagca gcgccatggc gatgctgtac ggctcctggc
     2401 cggtcgccgc cgccgcagac cagatgcgca ggctgcgctc ctgcgagcgc gccttcaaga
     2461 gctcgggcac gaaatggttg cgcagggcgt cgaacgggtg cgcgtcgcgg aagaagagcg
     2521 tctcgttcgt cgtcatcgcc tcgacgacgc gctgggcgag ctcgccgccg cggtcgcgcc
     2581 ggagtttgtc gacgagctcg tccaccgatt cgacgccttc acagcgcgcg acgggactga
     2641 gccgcgagtc gacgaggtag tccttgccgt cctcgagcac gatgccggag cgtcgataca
     2701 cgagcccctg caagtacgcc atgctgtcgg gcctgggcac taagcctccc cttgcgcgcg
     2761 cgcgcgcggg acttggccgt gcgagcgccg gacgcgcgcg acgatctcgt ccgcgagccc
     2821 gtccaagtgg agcaccttgt cggcgaggcg tgcttcgacg atcgcggccg gcatgctcgg
     2881 gatgacgcag gtctccgcgc tctgcgcgag cactttgctg cccgcgcgta cgagatcctg
     2941 cgcgccgttc gcgccgtccg agcccatgcc cgtgagcacg caagcgagca cgccgtcgcg
     3001 gtaaaagcgc gcgagtgagc gaaagagcac gtcgaccgcc gggcggcagg agtgctcggg
     3061 cggatcctga ttgagcagcg tgacgatgcg cccgttggcg cggccgatct tcaagtggaa
     3121 gtcgccaggc gcgatgtagc cgcggccggg ctcgaccgtc atcccgtgcg tcgcctccac
     3181 cacgcgcacg ctcgacgacg cagtgagccg gtcggcgagg atcttcgtga agaccttggg
     3241 catgtgctgc acgatcaaga taggcacggg caaatcgccc ggtaaacgcg cgaaaagcgt
     3301 ggcgagcgcg ttcgggccac ccgtcgaaca gccgatcgcg acggcttgaa tcgtcgccgg
     3361 gagctgcgcg atgggtgcgg gcggaatcaa ggtgacgtcg acttcgacgg agtcggcggc
     3421 gtgcggcgtc tggctcgcgt tgccgagtgt cagcaccttg ccgagcagct cctggcggaa
     3481 gagttcgaac tgattctcgc cgggacccgg cttggcgacg tgatcggtcg cgccggccgc
     3541 gagcgcgcgc agcgtcacgt cggcgccgct ctccgtgagc gagctgcaca tgatgaccgg
     3601 catggtcgga tgcgtgagcc gcatgcgccg cacggtcttg atgccgtcca tgtccggcat
     3661 catcacgtcg agcagcacga ggtccggct
//
LOCUS       DATIML010000311         2292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4104573, whole genome shotgun sequence.
ACCESSION   DATIML010000311 DATIML010000000
VERSION     DATIML010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4104573"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1552
                     /locus_tag="VLJ38_05410"
     CDS             <1..1552
                     /locus_tag="VLJ38_05410"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HSU38980.1"
                     /translation="NGAGSDAGATSSATLLPARIRRLASAEYDASVQALLETQASPAA
                     GPDFPPDLRQDGFTVNDAQRVDAVLVERLDAAALTLATEAENNGTLARLAPCAATDEA
                     SSCAQRFITTFGAKIYRRPLVDAETQGLLALYAAGAEDATYLDGIAHVTRGLLESAGF
                     LYVTELGDSQPGTSVAVELTPSELASALSYYLTSAPPDDELLATAAAGGLSDADTREA
                     QARRLFATSPAAQDTVVRLVREWLGIDGIDASAKDSFVYPEFDAQKPKIVAESSDFVR
                     AVAFESTGTVSELLGANWTVNSGPLALYRTTASGPIAQSSLIERVGILNQAAFLATYA
                     NAHESHPVFRGVAVARRVACIPLDSPASFNLQVVPPAPDPTKTTRERFAEHVVDPICA
                     GCHDIIDPFGFSFEHYDGMGAYRAEENGQAVDSTAVVKMDADYDGAYADSNALAAVFA
                     KSDTVRECFARLMYRAAAATGDDAATPGEAEFVQFWHSLPAAAQGNIVETLIAYVKSP
                     NFGRRQAL"
     gene            1579..2196
                     /locus_tag="VLJ38_05415"
     CDS             1579..2196
                     /locus_tag="VLJ38_05415"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HSU38981.1"
                     /translation="MRTLGVGAAVLPFVRLVEDSYAQSDGDALPQRFVGIYHPHGIAA
                     ELFARQEGETETSFALDYEGSPLQPFDDAATYGASFKDKVVVIEGIDLLSDTNGHNSA
                     GTLLTGSRIVGGTGGLPENSSLDQFLAVESGLGDATLVPSIALGVGNKALSARETLSF
                     GVGGVPISKIIDPVLAFDFLFKSAVVGSDPAARAEALRQQKLGLA"
BASE COUNT          388 a          794 c          741 g          369 t
ORIGIN      
        1 gaacggcgcc ggttccgatg ccggcgcgac gagcagcgct acgctgctcc ctgcgcgcat
       61 tcgacggttg gcgagcgccg aatacgacgc ttcggtgcaa gcgctgctag agacccaagc
      121 gagccccgcg gcgggtcccg attttccgcc cgacttacgg caagacggct tcaccgtgaa
      181 tgacgcgcag cgcgtggatg ccgtgctcgt cgagcgcctc gacgcggcgg cgctgacgct
      241 cgcgacggag gcggagaaca acggcaccct cgcgcggctc gcgccgtgcg ccgccaccga
      301 cgaggcctcg agttgtgcgc agcgcttcat cacgaccttc ggcgccaaga tctaccgccg
      361 gccgctcgtg gacgcagaaa ctcaaggcct cctcgcgctc tatgccgccg gggccgaaga
      421 cgccacgtac ctcgacggca tcgcgcacgt cacgcgcggc ttgctcgagt ccgcgggctt
      481 tctctacgtg accgagctcg gtgacagcca gcccggaacg agcgtcgccg tcgagctgac
      541 gccgagtgag ctcgcgagcg cgctctcgta ctacctgact tcggcgccgc ccgacgacga
      601 gctactcgcc acggcagcag caggtgggct ctccgacgcc gacacgcgtg aagcccaggc
      661 gcggcgcttg ttcgcgacgt cgcctgccgc ccaggacacc gttgttcggc tcgtgcgcga
      721 atggctcggc atcgacggca tcgacgcgag cgcgaaagac tcgttcgtgt accccgagtt
      781 cgacgcgcaa aagccgaaaa tcgtcgctga gagcagcgat ttcgtgcgcg ccgtcgcgtt
      841 cgagtcgacc ggcacggtct cggagctcct cggtgcgaac tggaccgtga atagcggccc
      901 actcgccctg tatcgaacca cggcgagcgg ccccatcgcc caaagctcgc tgatcgagcg
      961 tgtcggtatc ctcaaccaag cggcgtttct cgcgacttac gccaacgcgc acgaaagcca
     1021 tcccgtgttt cgcggcgtcg ccgtggcgcg ccgtgtcgcg tgcatcccgc tcgactcgcc
     1081 ggcctcgttc aacctacagg tcgtgccgcc ggcccctgat cccacgaaga cgacgcgcga
     1141 acgcttcgcc gagcacgtcg tggaccccat ctgtgccggg tgccacgaca tcatcgaccc
     1201 cttcggcttc tccttcgagc actacgacgg tatgggcgcc taccgcgccg aagaaaacgg
     1261 ccaggcggtc gacagtacgg ccgtggtcaa gatggatgcc gactacgacg gcgcctacgc
     1321 ggacagcaac gcgctcgctg cggttttcgc caagagcgac accgtgcggg agtgtttcgc
     1381 ccgtctgatg taccgcgcgg ccgcagcgac gggcgacgac gctgcgacgc ccggagaagc
     1441 agaattcgtg cagttttggc actcgctccc cgcggcggcg cagggcaaca tcgtcgagac
     1501 gctgattgcg tacgtgaaga gtccgaactt cggccggaga caagcgctgt gaaaggtgtc
     1561 cgcagcaggc gcgctttctt gcggacgctc ggcgtgggcg cggccgtgct gccgttcgta
     1621 cgcctcgtgg aagactcgta tgcacagtcg gacggtgacg ccttgccgca gcgtttcgtc
     1681 ggcatctatc acccgcacgg aatcgccgcc gagctcttcg cgcggcagga aggcgaaacg
     1741 gagacgagct ttgcgctcga ctacgagggc agcccgctcc agccgttcga cgacgccgcg
     1801 acgtacggcg cgagcttcaa ggacaaggtc gtcgtcatcg agggcatcga tctcctgtcc
     1861 gacacgaacg gccacaactc ggccggcacg ctgctcacgg gcagccgcat cgtgggcggc
     1921 acgggcgggc tgccggaaaa tagctcgctc gatcaattcc tcgcggtcga aagcggactc
     1981 ggcgatgcga cgctcgtccc gagcatcgcg ctcggcgtcg gcaacaaagc cttgagcgcg
     2041 cgcgagacat tgtcgttcgg cgtcggtggc gtaccgattt ccaaaatcat cgaccccgtg
     2101 ctcgctttcg atttcttgtt caagagcgcc gtcgtcggca gcgacccggc ggctcgggcc
     2161 gaggctctac gccagcagaa gctcggctta gcctgatcga tttcgtgaac ggcgacgtga
     2221 accggctgcg cgcgcgcgtg ggtccgtttc aggttcaaaa actcgatcaa cacctggacg
     2281 cgctccgcgc gc
//
LOCUS       DATIML010000312         2625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1796822, whole genome shotgun sequence.
ACCESSION   DATIML010000312 DATIML010000000
VERSION     DATIML010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1796822"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VLJ38_05420"
     CDS             <1..730
                     /locus_tag="VLJ38_05420"
                     /inference="COORDINATES: protein motif:HMM:NF015376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HSU38982.1"
                     /translation="ARELAASDPGAPPLVIGDLSAKYGGKIDGHQSHRTGRDVDILYQ
                     YLTPSGARVSAPGFIRVEADGLARNPDDGHILRLDVEHEWRLVKALVTAPEIGVQFMF
                     ASRNVEALLIDYAMARGEPLELVLHAQSVMWQPGDSMPHDDHIHLRIACSVEETLAGC
                     TGGGPYWDWLPALPAPVPLDDGKLALLIADDPPLSPLPFPTEDGVAAAGLGMTPTALM
                     SSGQSSAGAKSGLDKQRDPAHDGE"
     gene            727..1617
                     /locus_tag="VLJ38_05425"
     CDS             727..1617
                     /locus_tag="VLJ38_05425"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HSU38983.1"
                     /translation="MTRQAALAARGTPRGELALGDCLTLLPELAEKRPFDLVYVDPPF
                     DTRAHHGVREGRGERARGERAYKDSWGGIDAFLAMLEPRLAAMRDAMSDRGSLFLHLD
                     HRTVHEAKVLADRVFGRPGFQGEIVWIPGNGARRRGGPSVTHQTILVYARGRQMIWNE
                     DDPALREPYAETSQRMHFGKRDANGRQYRERVIAGKSYRYYADIGRRRGSVWSDCPAM
                     RANTPLLGEATGYPTQKPEALLERVIRAASLPESRVLDPMCGSGTTLAVAARLGRAWT
                     GIDVSPVAIRIATKRLGSSA"
     gene            complement(1747..>2625)
                     /locus_tag="VLJ38_05430"
     CDS             complement(1747..>2625)
                     /locus_tag="VLJ38_05430"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38984.1"
                     /translation="LLACKKAKLVPGERHELGALRAIGTTGAPLPADGFAWVYDAVKR
                     ELLLASVSGGTDVCTAFVLSCPWLPVHAGEIQCRGLGAKIEAYDVSGHPVVGEVGELV
                     LTEPLPSMPVGFWGDADGSRFRESYFSTYPGVWRHGDWIKLTERGSCVIYGRSDATLN
                     RGGVRMGTSEFYRVVEALPEVADSLVVDTGSLESDAVGKLWLFVVLAPGTQLGAELER
                     RIKDTVRRELSPRHVPDAILAVRAVPRTLNGKKLEVPVKRILLGTPAEKAASRDTLAD
                     PSALDAFVELARAHGD"
BASE COUNT          448 a          941 c          854 g          382 t
ORIGIN      
        1 cgcacgcgag ctcgccgcga gcgatcccgg agcgccgccg ctcgtgatcg gcgatctttc
       61 ggcgaaatac ggcggcaaaa tcgacggcca tcagtcgcac cgcacgggcc gcgacgtcga
      121 tatcctctac cagtacctga cgccctcggg cgcgcgcgtc agcgcgccgg gcttcatccg
      181 cgtcgaagcc gatggtctcg cgcggaaccc cgacgacggc cacatcttgc gcctcgacgt
      241 cgaacacgag tggcggctcg tcaaggcgct cgtcacggcg ccggaaatcg gcgtgcagtt
      301 catgttcgcg agccgtaacg tcgaggcgct gctcatcgac tacgccatgg cgcgcggcga
      361 gccgctcgag ctcgtgctgc acgcgcaaag cgtgatgtgg cagccgggcg acagcatgcc
      421 ccacgacgat cacattcatc tgcgcattgc ctgcagcgtc gaagagacgc tcgccggctg
      481 cacgggcggc gggccgtact gggactggct cccggccctg cctgcgccgg ttccgctcga
      541 cgacggcaag ctcgcgctgc tcatcgccga cgatccgccg ctctccccgc tgcccttccc
      601 gaccgaagac ggcgtggccg cggccggact cggcatgact cccaccgcac tcatgagctc
      661 gggccagagc tcggccggcg ccaaatccgg gctcgacaag cagcgcgacc cggcgcacga
      721 cggcgagtga cccgccaggc ggcactcgcg gcacgcggca cgccccgagg cgagctcgct
      781 ctcggcgatt gtttgacgct tttgcccgag ctcgcggaaa agcgcccctt cgatctcgtc
      841 tacgtggatc cgccgttcga cacgcgagcg catcatggcg tacgtgaggg tcgcggcgaa
      901 cgtgcgcgcg gcgagcgcgc ttacaaggac agctggggcg gcatcgacgc cttcctcgcg
      961 atgctcgagc cgagacttgc cgccatgcgc gacgccatga gcgaccgcgg cagcctcttt
     1021 ctgcatctcg atcatcgcac cgtgcacgaa gccaaagtgc tcgccgaccg cgtcttcggt
     1081 cggcctgggt ttcaagggga aatcgtctgg atcccgggca acggcgcgcg ccgtcgcggg
     1141 ggcccgagcg tcacgcacca aaccatcctc gtctacgcgc ggggccggca gatgatctgg
     1201 aacgaggacg acccggcgct gcgcgaaccg tacgccgaga cgagtcagcg catgcacttc
     1261 ggcaagcgcg acgcgaacgg ccgccagtat cgggagcgcg tgatcgcggg caaatcctac
     1321 cgctactacg ccgacatcgg ccggcgccgc ggcagcgtct ggagcgactg ccccgccatg
     1381 cgcgccaaca ctccgctgct cggtgaggcc acgggctacc ccacccaaaa acccgaagcc
     1441 ctgctcgagc gcgtcatccg cgccgcttcg ctccccgaga gccgcgtgct cgatcccatg
     1501 tgcggctcgg gcacgacgct ggccgtcgcc gcccgcctcg gccgcgcgtg gaccggcatc
     1561 gacgtgagcc ccgtcgccat ccgcatcgcc acgaaacggc tcggctcgag tgcctagatc
     1621 gcagcgcagc tgcggtgatg gaacaaaaga agcacccgta gacaatagtg cgctgaaaca
     1681 gccgattttc tcggcctcca cacttgcagg ccgagaaaat cggcgatcga cgcaacggtc
     1741 tcggggctaa tcaccgtggg cgcgcgccaa ctcgacgaag gcgtcgagtg cgctcgggtc
     1801 ggcaagcgtg tcgcgactgg ccgctttttc tgcgggcgtg ccgagcaaga tgcgtttgac
     1861 gggtacttcg agcttcttgc cgttcaaggt gcgggggacg gcgcgcaccg cgaggatcgc
     1921 gtccggcacg tggcgtggtg acagctcgcg gcgaacggtg tccttgatgc gtcgctcgag
     1981 ctcagcgccg agctgcgtgc cgggcgcgag tacgacgaag agccagagct tgccgacagc
     2041 gtcgctctcg agcgaccccg tgtcgaccac gaggctatcg gcgacttcgg gcagggcctc
     2101 gacgacgcga taaaattcgc tcgtgcccat gcgcacgccg ccgcgattga gcgtcgcatc
     2161 ggaacgaccg taaatcacgc acgatccacg ctcggtgagc ttgatccaat cgccgtgacg
     2221 ccagacgccg gggtacgtcg aaaagtagct ctcgcgaaag cgcgagccgt cggcgtcgcc
     2281 ccaaaacccg acgggcatcg agggcagcgg ctccgtcagc acgagctcgc cgacttcgcc
     2341 cacgacgggg tgaccactca cgtcgtacgc ttcgatcttc gccccgaggc cgcgacactg
     2401 gatctcgccg gcgtgaaccg gcagccacgg acacgagagc acgaaggccg tgcatacatc
     2461 cgtcccgccg ctcaccgaag cgagcaagag ctcacgcttc acggcgtcgt aaacccaggc
     2521 gaacccgtcg gcgggtaacg gtgcgcccgt cgtcccgatc gcgcgcagcg ccccgagctc
     2581 gtgccgctcg ccgggcacga gcttggcctt tttgcatgcc agcaa
//
LOCUS       DATIML010000313         2275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4686500, whole genome shotgun sequence.
ACCESSION   DATIML010000313 DATIML010000000
VERSION     DATIML010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4686500"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1715)
                     /gene="ftsH"
                     /locus_tag="VLJ38_05435"
     CDS             complement(<1..1715)
                     /gene="ftsH"
                     /locus_tag="VLJ38_05435"
                     /inference="COORDINATES: protein motif:HMM:TIGR01241.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HSU38985.1"
                     /translation="MGNSVVPGPPNQQQKTPPPARSGWYAWVLLAGLLVASWSLTNYF
                     GTGGGEPQLSYSAFYKDIDAQTIEHVTIKGQTVTGTFKQPTTVNGRQTRAFRTVLPAQ
                     EDRDLLPLLRNKGVVVEVRSEEQPAIFQIALSFLPLLLISGVWIWLSRRATNMMGPGG
                     PLAMMRGRSRRFEKESEVPVRFDDVAGLQSAKRDLQEIVQFLKEPQRFRKLGGKVPRG
                     VLLVGPPGTGKTLLARAVAGEAGVPFFSINGSEFIELFVGVGASRVRELFEETKKVAP
                     AIVFIDEIDAVGRSRGAGLGGGHDEREQTLNQLLSEMDGFSRNDLTIVLAATNRPDVL
                     DPALLRPGRFDRRVIIDRPELAARRAILDVHTRGKPLDQDLDLDEIAGNTPGFSGADL
                     ANLANEAALNATRRGAEAISMADFLSAYDKIVLGDPRETKLDPAEKRRIAVHEAGHAV
                     VAHFSPNAEPPQRVSIIPRGMALGVTQQSPGGDRHIYTEPQLADNLRVMLGGHSAERV
                     VLGDTSSGAENDLKRASELAFKMVAHWGMSEKIGPVYHEHRTEHPFLGQVLATEGATS
                     DATVHL"
     gene            complement(1935..>2275)
                     /locus_tag="VLJ38_05440"
     CDS             complement(1935..>2275)
                     /locus_tag="VLJ38_05440"
                     /inference="COORDINATES: protein motif:HMM:NF016060.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HSU38986.1"
                     /translation="ATLTLLVQLAGVSPRAASVPALALGAIVMFFGQKYLAFQSSGKP
                     SLREMLLFALVQLGGFALTAFLFDLLLRLVPLSAVHYLVSRLIVTNVVWLAYSFPLWH
                     FVFRKPSSAA"
BASE COUNT          390 a          719 c          781 g          385 t
ORIGIN      
        1 aggtgcaccg tcgcgtcgct cgtcgcgccc tcggtcgcga gcacttgccc gaggaacggg
       61 tgttcggtgc ggtgctcgtg atagacgggg ccgatttttt cgctcatgcc ccagtgcgcc
      121 accatcttga aggcgagctc actcgcgcgc ttcaggtcgt tttcggcgcc ggaagaggta
      181 tcgccgagca cgacgcgctc ggcggagtgt ccaccgagca tgacgcggag gttatcggcg
      241 agctgcggct cggtgtagat gtggcggtct ccgccggggc tctgctgcgt cacgccgagg
      301 gccatgccgc gcggaatgat gctgacgcgc tggggcggct cggcgttcgg cgagaagtgc
      361 gcgaccacgg cgtggccggc ttcgtgcacg gcgatgcggc gcttttccgc aggatcgagc
      421 ttggtctcgc gcgggtcgcc gagcacgatc ttgtcgtagg ccgacaagaa gtccgccatg
      481 ctgatggctt ccgcgccgcg gcgtgtggcg ttgagcgcgg cttcgttcgc gaggttggcg
      541 aggtcggcgc ccgaaaatcc cggcgtattg ccggcgattt cgtcgaggtc gaggtcttgg
      601 tccaggggct tgccgcgcgt gtgcacgtct agaatcgcgc gtcgggccgc aagttcgggg
      661 cggtcgatga tcacgcgccg gtcgaaacgt ccggggcgga gcagcgccgg atcgagcacg
      721 tcgggacgat tggtcgccgc gagcacgatg gtgagatcgt tacgcgagaa cccgtccatt
      781 tcggagagca gctggttcaa cgtctgttcg cgctcgtcgt gcccaccgcc gagccccgcg
      841 ccgcgcgagc ggccgacggc gtcgatttcg tcgatgaata cgatggcggg ggcgaccttc
      901 ttcgtctcct cgaacagctc gcggacgcgc gacgcgccga ctcccacgaa gagctcgatg
      961 aactccgaac cgttgatgga gaagaacggc acgcccgctt cgcccgcgac cgcacgggcg
     1021 agcagcgtct tgcccgtacc aggtgggccg acgagcaaca caccacgcgg caccttgccg
     1081 ccgagcttgc ggaaacgctg cggttccttc aaaaactgca cgatttcctg taaatcgcgc
     1141 ttggccgatt gcaggcccgc cacatcgtcg aagcggacgg gcacttcgct ctccttttcg
     1201 aaccgacggg aacggcctcg catcatggcg agcggtccgc cggggcccat catgttcgtt
     1261 gcgcggcgcg agagccaaat ccagacgccg ctgatgagca agagcggcag gaacgagagc
     1321 gcgatctgaa aaatcgcggg ctgctcctcg ctgcgtacct cgaccacgac gcccttgttg
     1381 cgaagcagcg gcaggaggtc ccgatcctcc tgagccggca gcacggtgcg aaacgcgcgc
     1441 gtctgccgcc cgttcacggt cgtcggctgc ttgaaggtgc cggtgacggt ttggcctttg
     1501 atcgtgacat gctcgatggt ttgagcgtcg atgtccttgt agaacgcgga gtacgacagc
     1561 tgcggctcac cgccgcccgt gccgaagtag ttcgtgagac tccacgaagc gacgagcagg
     1621 cccgccaaaa gtacccacgc gtaccagcct gagcgcgccg ggggcggggt cttctgctgc
     1681 tggttcgggg gacccgggac tacgctgttt cccattttgc ctcaacgtaa ggacgctgca
     1741 ctcttctgtc catgcggcaa cccgcaggtc gcgtgggttt ggggaaaaac gcccgcactg
     1801 tcccaggatg gcgccgcgga tacggccgag ttttgcctgg ccggttcagg cgtcttcggg
     1861 aaacacgcga ctcgagccac atgtttcccg cgttcagcag gagtcgtgcc agcagccctc
     1921 ggcggcgagg tcgatcaggc ggcggagctc ggcttacgaa acacgaaatg ccagagcggg
     1981 aagctgtacg cgagccagac cacgttcgtc acgatcaggc gactcacgag gtagtgcacc
     2041 gcagacagag gtacgaggcg taacaagaga tcgaagagga acgccgtgag cgcgaagccg
     2101 ccgagctgca cgagcgcgaa cagcagcatc tcgcgcaggc tcggcttccc gctgctctga
     2161 aacgcaagat acttctgccc gaagaacatc acgatcgcgc cgagagcgag ggccggcacg
     2221 ctcgccgcgc gcggcgacac gccggcgagt tgcacgagca gggtgagcgt cgcca
//
LOCUS       DATIML010000314         3044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4975215, whole genome shotgun sequence.
ACCESSION   DATIML010000314 DATIML010000000
VERSION     DATIML010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3044
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4975215"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="VLJ38_05445"
     CDS             <1..826
                     /locus_tag="VLJ38_05445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38987.1"
                     /translation="DIRSEHDARFEPFEPRMDFDGAATLRGSTRDFFYVLVRDMTPKN
                     PPGVAWHPDGGTQAPPTWLPGILSGELKLGGIGVELVSFAAGSFELSVRPGPLEPATN
                     TRSRSGKLAEPDHERALAELELGHATGATRLGLALGTLIPLPLRPSNATLVVGSGTAR
                     ILLPGEPVTLGAGEQAVQLPLLADDDGVTPRARERGDMRPRSALGVTEDGRVVVALLR
                     HDSSDPLAVALRAAGCHRVLELDRGSHHPASLERAGTDKPPRNAPESTTLWVLARK"
     gene            1886..>3044
                     /locus_tag="VLJ38_05450"
     CDS             1886..>3044
                     /locus_tag="VLJ38_05450"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HSU38988.1"
                     /translation="MASAAVIGFEDVHADVSWRRAHKELVRLSSKRAGLDFEEGRWLL
                     RAFRSGAHRELGYGSFHEYTERLFGYAPRLTHEKLRVAEALEALPGTAEELKEGTLSF
                     SAVRELTRVAIPATEREWLRAARGRTVREVEELVSGHRAGSRPGDVPDASAKRHVLRF
                     DISGEALASFREAMAKIRREAGEALDDDAAILLLSRSVLEGTRDEARSSYQVALTVCE
                     RCRQGRQPGRGELVQVSQAVVDMAECDGQHLGHLETSVEPRAHVGTAKKRRRATQTIP
                     PALRRQVLRRDGGRCQVPGCRHATFVDVHHLRPRSEGGANTLENLVTLCGAHHRASHA
                     GKLSSEGAPSEGLTFLHADGTPYGHAPSPAIAELRARAYRALTHLGFRESEA"
BASE COUNT          481 a         1042 c         1060 g          461 t
ORIGIN      
        1 cgacatccgg agtgaacacg acgcgcgctt cgagcccttc gagccgcgca tggatttcga
       61 cggcgcggcg acgctgcgtg gctcgacacg cgacttcttc tacgtgctcg tgcgcgacat
      121 gacgccgaag aacccgcccg gcgtcgcctg gcacccggac ggcggcaccc aagcgccgcc
      181 cacgtggttg cccggcatct tgtccggcga gctcaagctc ggcggcatcg gcgtcgagct
      241 cgtgagcttc gcggcgggca gcttcgagct ctcggtacgg ccgggtccgc tcgagccggc
      301 gacgaacacc aggagccggt cggggaagct cgccgagccc gatcacgaac gcgccctcgc
      361 cgagctcgag ctcgggcatg cgacgggcgc gacgcggctc ggactcgcgc tcggcacgtt
      421 gatccccctg cccctgcggc cgtcgaatgc gacgctcgtc gtcggcagcg gcacggcgcg
      481 catcctcttg cccggtgagc ccgtgacgct cggcgcaggg gagcaggccg tgcagctgcc
      541 gctcctcgcc gacgacgacg gcgtgacgcc gcgcgcgcgc gaacgcggcg acatgcggcc
      601 gcgctccgcg ctcggcgtca ccgaggacgg ccgcgtggtg gtagcgctct tgcgtcacga
      661 cagcagcgac cccctcgccg tcgcgctccg cgcggccggg tgccatcgcg tgctcgagct
      721 cgatcgcggc tcgcaccatc cggcgtcgct cgagcgcgca ggcaccgaca aaccgccgcg
      781 caacgcgccg gagtcgacga cgctctgggt cctcgcgcgc aagtgagcgc gcgggcctgc
      841 gcggacggct tcaagcggga tcacaggaag ggggaagggc gggaaggttc ggcggcttga
      901 gcctgaggcg acgcagccct cgctggatca tgccgatgac tcgtccgagc agtcctctaa
      961 tcttcagacc ttccaccttc ctgtttgctc ctctctcctc gtcgccgctc gttgcggccc
     1021 cctacacagc gctcatcatt ctacacaaat gtgtagcagt ccggcgtacg gggccagcgt
     1081 tgccgcgagt gggacagccg gagagaccgt ccgcaggtca agcgcagctg ctgctcggag
     1141 tggtgcgttc aattgacgtc ttcgtgttgg ggcaatgagc tgcccccgcg tgggtccggc
     1201 gctgcacgtc ctgcgtgctc ggccttcagc ctgcgcgcgc aggcgcccgc caagcgcccg
     1261 ctgcgcggtc gcgggggcgc ggcgatagcg gccggcatcg gacgacgtcg gcggcatcgg
     1321 acgacgtcgg ggcggagcgc gaaagacgcg cctggggcga cggcgcgcgg aattgcacga
     1381 ggtgcaggcg ccgtgaatag acgcgcgatg agctaagcgg aaccggccgg caacacgccg
     1441 agcgcccgat cgccgtcgtc gggtaacgct attccgctcc acgccgcgaa gaccgtgcgg
     1501 tgacttcagc gcccgcggcg gcgtggtgct cggcagcggg gcttggggct cgatacggga
     1561 gcgatgtcag tcgatgttac agaccgcccc gccgcccgag cctttgactt gtggtgttgc
     1621 agtcaactcg tgcgggggct gaagagcagg tagtccgttc gatttatgtg gacagctttt
     1681 cgccgacgac gtgcacgcgt ccgttcgacg agctctgcat agcgtcgtcg cgctcgtctg
     1741 ttggatgcag cgcgcgtttc gcggcgcccg cgagtcgagc gccgtccgac gcccgcaaac
     1801 gcgcgcagcg cggggcacgc gaagccaaaa aagtgcgtga tagaaggaac cgtcgactca
     1861 gaagcacaag ccgggagggt tcgacatggc atcagcagcg gtaatcggat tcgaggacgt
     1921 tcacgctgac gtctcttggc ggcgcgctca caaagagctc gttcgactct ctagcaaacg
     1981 cgcgggactc gatttcgagg aagggcgctg gctcctgcgg gcattccgct cgggagccca
     2041 tcgcgagctc gggtacggct cgtttcacga gtacaccgag cggctcttcg gctacgcccc
     2101 acgcctcacc cacgagaagc tccgggtcgc tgaggcactc gaagcgctgc cagggacagc
     2161 cgaagagctc aaggagggga ctctcagctt ctccgccgtg cgggagctca cgcgtgtggc
     2221 aatcccagcg accgagcgcg agtggcttcg agcagcgcgg ggacgcacgg tgcgcgaggt
     2281 ggaagagctc gtgtccggtc atcgtgccgg aagtcgcccg ggcgacgtcc cggacgcgag
     2341 cgccaagcgt cacgtgctcc gcttcgacat ctccggcgaa gcactcgcga gctttcgcga
     2401 agccatggcc aagattcggc gcgaggcggg cgaagcactc gatgacgacg cggccatctt
     2461 gctcctcagt cgcagcgtcc tcgaaggcac gcgggacgaa gcccgctcga gttatcaggt
     2521 ggcgcttacc gtgtgcgagc gttgccggca gggccggcag ccgggccgcg gggagctcgt
     2581 ccaggtgtcg caggcagtgg tcgacatggc cgagtgcgat gggcagcacc tggggcatct
     2641 cgaaaccagc gtcgaaccgc gcgcccacgt gggcacagcg aagaaacgca ggcgcgcgac
     2701 gcaaaccatc ccgcctgcgc tccggcgcca ggtgctgcgc cgcgacggtg gacgatgcca
     2761 ggtgcccggc tgtcggcacg ctacttttgt cgatgtgcac cacctccggc ctcgctcgga
     2821 aggcggcgcg aacacactcg agaatctcgt caccctgtgc ggtgcgcacc accgtgcaag
     2881 ccacgccgga aagctttcga gtgaaggggc accgtccgag ggtctcactt tcctgcacgc
     2941 tgacggcact ccttacggac atgcaccctc gcccgccatc gcggagctac gcgcgagggc
     3001 ctatcgcgcc ctcactcact tgggcttccg cgagtcggag gcga
//
LOCUS       DATIML010000315         1758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3818658, whole genome shotgun sequence.
ACCESSION   DATIML010000315 DATIML010000000
VERSION     DATIML010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3818658"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..793
                     /locus_tag="VLJ38_05455"
     CDS             <1..793
                     /locus_tag="VLJ38_05455"
                     /inference="COORDINATES: protein motif:HMM:NF021613.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HSU38989.1"
                     /translation="SMNTLVFDIETVPDVEFGRRLFGLDGLSDDEVGKAMQARSRQES
                     GSDFLPHEQHRIVAISCAFRSREGFRVWSLGDESASERELVLRFFDGIEKFSPDLVSW
                     NGGGFDLPVLHYRALRHQVSGPRYWEVGEEDTAFRYNNYLGRFHWRHIDVMDVLSGYQ
                     NRARASLSDTAVLLGYPGKLGFDGSQVWDAYLGGELLRIRRYCETDVINTWLVFLRFQ
                     HMRGRLTDAGLAEELARTRAWLTEQRLPHFDEFLAAWPASGEAAS"
     gene            790..>1758
                     /locus_tag="VLJ38_05460"
     CDS             790..>1758
                     /locus_tag="VLJ38_05460"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38990.1"
                     /translation="MSKAARAPRTSGALETGTVVDLTHEGEGVVRGGEVGGKTVFIAG
                     ALPGERVTYRRRGFHKSHDEAELVEVLDASPDRVAPRCAHFGVCGGCALQHLAPEAQL
                     AAKQKELATNLERIGNVTPETWLPPLLGPHWGYRRRARLSSRYVSKKGRSLVGFREKQ
                     GKYVADVTRCEVLAEPVGALVGTFAELLTSMAGRASIPQIEVALSDGERALVIRVLDP
                     LNESDLEKLRDLERVQGLRILLQPGGLDSIVPLTPGPLDLHYRLDAFDLKLDFGPTDF
                     VQVNAAINAAMIARAIELLDVEPSDRVLDMYCGLGNFTLPLARRAAA"
BASE COUNT          264 a          599 c          601 g          294 t
ORIGIN      
        1 gtcgatgaac acgctggtct tcgacatcga aaccgttccc gacgtggagt tcgggcgtcg
       61 actgttcggc ctcgacggcc tgtccgacga cgaagtcggc aaggcgatgc aggcgcggtc
      121 gcgccaggaa tcgggcagtg atttcctgcc gcacgagcag caccgcatcg tcgccatctc
      181 gtgcgcgttc cgctcgcgcg aaggcttccg cgtgtggagc ctgggtgacg agagcgcgtc
      241 cgaacgcgag ctcgtgttgc gcttcttcga cggcatcgag aagttttcgc ccgatctcgt
      301 gagctggaac ggcggcggtt tcgacctgcc ggtgctccac taccgcgcgc tgcgccacca
      361 ggtgtccggg ccgcgctact gggaggtcgg cgaggaggac acggcgttcc gctacaacaa
      421 ctacctcggc cgctttcact ggcggcacat cgacgttatg gacgtgctct cgggctacca
      481 gaaccgtgcg cgcgcctcgc tgtcggacac cgccgtgttg ctgggatatc ccggcaaact
      541 cggcttcgac ggatctcagg tgtgggacgc gtatctcggc ggtgagctgc tgcgcatccg
      601 gcgctactgc gagaccgacg tcatcaacac gtggctcgtg ttcctgcgct tccagcacat
      661 gcgcggccgc ctgaccgacg cggggctcgc cgaggagctc gcgcgcaccc gtgcctggct
      721 caccgagcag cgcttgcccc atttcgacga attcctggcc gcgtggcccg cgagcggcga
      781 ggccgcctcg tgagcaaggc cgcgcgcgcc ccgcggactt ccggggcgct cgagacgggg
      841 acggtggtcg atctcacgca cgaaggcgaa ggcgtcgtgc gcggtggcga ggttggcgga
      901 aagacggtgt tcatcgcggg cgcactgccc ggtgagcgcg tgacctatcg ccgtcgcggc
      961 ttccacaaga gtcacgacga ggccgagctc gtcgaggtgc tcgacgcctc gcccgatcga
     1021 gtggcgccgc gctgcgcgca cttcggcgtg tgcggcggct gcgcgctgca gcacctcgct
     1081 cccgaggcgc agctcgcagc gaagcagaag gagctcgcga cgaatctcga acgcatcggc
     1141 aacgtcacgc ccgaaacctg gctgccgccc ttgttaggcc cgcactgggg ctatcggcgc
     1201 cgcgcgcgcc tctcgtcgcg ctacgtgtcg aagaaaggcc gcagcctcgt cggcttcagg
     1261 gagaagcagg gcaagtacgt cgccgacgtc acgcgctgcg aggtgctcgc cgaacccgtg
     1321 ggcgcattgg tcggcacgtt cgccgagctg ctcacgtcga tggccggacg cgcgagcatc
     1381 ccgcagatcg aagtcgcgct gtcggacggc gagcgggcac tcgtgatccg cgtgctcgat
     1441 ccgttgaacg agtccgacct cgagaagctg cgtgatctcg agcgcgtgca gggcttgcgc
     1501 atcctgttgc agccgggcgg gctcgactcc atcgtgcccc tcacgccggg gccgctcgac
     1561 ctgcactacc ggctggacgc gttcgacctc aagctcgact tcggtcccac ggacttcgtg
     1621 caggtgaatg ccgccatcaa cgccgcgatg atcgcgcgcg cgatcgaact actggacgta
     1681 gagccttccg accgcgtgct cgacatgtac tgcgggctcg gcaatttcac gctgcctctc
     1741 gcgcgccggg cggcagcg
//
LOCUS       DATIML010000316         2939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2953170, whole genome shotgun sequence.
ACCESSION   DATIML010000316 DATIML010000000
VERSION     DATIML010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2939
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2953170"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..755)
                     /locus_tag="VLJ38_05465"
     CDS             complement(<1..755)
                     /locus_tag="VLJ38_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU38991.1"
                     /translation="MKILIVDDQRSARRVLKHLLADQPNLDVIEAGSVEEAKERVETQ
                     SPDAMLVDIRLSNDSTNRGGLDFLRWVRESGRATPAVMVTGSTELVEIREAMRQGAQD
                     YVLKDELSPEMILPIVEGIRERLELRTEVRKLRQHLDEAWGPAAFVGSSSAMERVKRL
                     VTRVADADAPVLIIGETGSGKEMVARAIHHSGRRAAHPFLAVNCSALPGSLIESLIFG
                     HHRGAFTGAVQRIRGQLELAGEGTLLLDEIAEMP"
     gene            complement(752..2218)
                     /locus_tag="VLJ38_05470"
     CDS             complement(752..2218)
                     /locus_tag="VLJ38_05470"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU38992.1"
                     /translation="MSHRLGSSWADTFHSAELWIWTAGVVVVAYLGLRARRAAGRSSS
                     KGRALLPRVGTNLVLGALASLVAIGAGAAVGAWLGASFRDALAGAAPAGIAAALLVAL
                     SSRMSDITLFHARAEYKPTIDRLSEELVTLSSPRDVALAIERTVRRWLRCDFIELKLA
                     QPDGPSFGPAPDLEAGAPTTHANEPPCPPETAMRLVVAFGGKPYGWLDVGGKRGGALF
                     TSDDIDLLRTIANHGGLALAHARAYQELEERRRRQAEAWRGEREALVETVAAEIAHEI
                     RYPLNYFRSLFERGSKTGRLTPDDIDVGREEVDRLERLVAGLKRMVAHRIERRPTHVA
                     ELCTRVEALLRDSLGRLTLEVELAPNATLNCDPDKLTQVLVNLLSNAAEACGPDGRAG
                     IDWRVTSQGGELSVWDDGPGFGADAARLFAPWYTTKQRGTGLGLAITHRLVRAHGWTI
                     TAARREGRTVFAVSVRLEDILQRATAAERDSHDRVRVA"
     gene            complement(2433..>2939)
                     /locus_tag="VLJ38_05475"
     CDS             complement(2433..>2939)
                     /locus_tag="VLJ38_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38993.1"
                     /translation="DYRRISLAKQTVLFPACIGVAHVAGASTGQIEALRRMLVGVALG
                     RQFETDAGSWEDDWRRGGGAWAVSLARRKLEAVKEQSADERPTEPDLVRRRVHRTRVL
                     YSMLRAARQEYRSAWRYARVCGSAPLVLWTQQRLAHLDGLLPLEARHAGYVVRALALA
                     PWASQVLT"
BASE COUNT          439 a         1010 c         1039 g          451 t
ORIGIN      
        1 ggcatctcgg cgatttcgtc gagtaggagc gtgccttccc ccgcgagctc gagctggcca
       61 cggatgcgct gcaccgcccc cgtgaaagcg ccgcggtgat ggccgaaaat cagcgattcg
      121 atcagcgagc cgggcagggc cgagcaattg acggccagga acggatgagc ggcgcggcgg
      181 ccggagtgat ggatcgcgcg cgccaccatc tctttaccgc tgccggtctc cccgatgatg
      241 aggacgggcg cgtcggcgtc ggccacgcgc gtcacgaggc gcttgacgcg ctccatcgcg
      301 gacgagctgc cgacgaacgc ggccggtccc caggcttcgt cgaggtgctg ccgcagcttg
      361 cgcacctcgg tgcggagctc gagtcgttcg cggatgcctt cgacgatcgg caggatcatt
      421 tcgggactga gctcgtcttt gagcacgtag tcctgcgccc cttggcgcat ggcctcgcgg
      481 atttcgacga gctcggtcga gcccgtcacc atcacggccg gcgtcgcgcg gccgctctcg
      541 cgcacccagc gcaagaaatc gagcccaccg cggttggtcg aatcgttcga gagtcggata
      601 tcgacgagca tcgcgtcggg gctctgcgtt tcgacccgct ctttggcttc ctcgacggag
      661 ccggcctcga tcacgtcgag gttcggctgg tcggcgagca ggtgcttgag cacgcgacgc
      721 gcgctgcgct gatcgtcgac gatcaggatc ttcacgcgac cctcacgcga tcgtgcgagt
      781 cgcgttcggc tgccgtggcg cgctggagga tgtcctcgag gcgcacgctg actgcgaaaa
      841 cggtgcgacc ctcccggcgc gccgcggtga tcgtccagcc gtgcgcgcgg acgagccggt
      901 gcgtgatcgc gagcccgagg cccgtgccgc gctgcttggt cgtgtaccag ggggcgaaca
      961 ggcgcgcggc gtcggcgccg aaccccgggc cgtcgtccca gacgctgagc tcgccgcctt
     1021 gagaggtgac gcgccaatcg ataccggcac ggccgtccgg cccgcacgct tcggctgcgt
     1081 tcgaaagcag gttcacgagc acttgggtga gcttatccgg atcgcaattg agcgtcgcgt
     1141 tcggtgcgag ctcgacttcc agcgtgagcc tgccgagcga atcgcgcagc agcgcttcga
     1201 cgcgcgtgca gagctcggcg acgtgggtgg gtctgcgctc gatgcggtgc gccaccatgc
     1261 gtttgagccc ggccacgagc cgctcgagac gatcgacctc ctcgcggccc acgtcgatgt
     1321 cgtcgggcgt gagccgtccg gtcttgctgc cgcgctcgaa caggctacga aaatagttga
     1381 gcggataacg tatttcgtgg gcgatttcgg cggcgaccgt ctcgaccagc gcctcgcgct
     1441 caccgcgcca agcttccgct tgccggcgcc gtcgctcctc gagctcttgg taggcgcgtg
     1501 cgtgggcgag tgcgagcccg ccgtggttcg cgatcgtgcg caagaggtcg atgtcgtcgc
     1561 tcgtgaagag cgcgccgccg cgcttgcccc ccacgtcgag ccaaccgtac ggtttgccgc
     1621 cgaaggcaac gacgagcctc atggccgtct ccggcgggca gggtggttcg ttggcgtggg
     1681 tcgtcggcgc gcccgcttcg aggtccggag cgggcccgaa gctcgggccg tccggctgag
     1741 ccaacttgag ctcgatgaag tcgcagcgga gccagcgccg cacggtgcgt tcgatggcga
     1801 gcgctacgtc gcgtggcgag ctcagcgtga cgagctcctc actcagccga tcgatggtcg
     1861 gcttgtactc ggcgcgcgcg tggaacagcg tgatgtcact catccgggag gacagcgcca
     1921 cgagcagcgc tgcggcgatg cccgccggcg ccgcgccggc gagcgcgtcg cgaaagctcg
     1981 cgccaagcca tgccccaacc gcggcgccgg ccccgatggc gaccagggac gcgagcgcgc
     2041 cgagcacgag gttcgtgccg acgcgcggga gcaatgcccg acccttcgag ctcgaccgcc
     2101 ccgcggcgcg ccgggcgcgc aggccgaggt atgcgacaac caccacgccg gcggtccaaa
     2161 tccagagttc tgccgagtgg aaggtgtccg cccaactaga gccgaggcgg tgagacacgg
     2221 ggaccgaagc atacgcccgt cagggtccgc gttccatcgg cgcgcgggac cgcgcgataa
     2281 ccctactagt tttgctgcgc gccccgcggc gccgcgccat ttgctccgcg tgcatgcggc
     2341 gctcgggttc ccggcgtcgc cggacagatg ctcccagcgc accgggagcg caagtcgggt
     2401 gccgcgacgg agcttcaacg cggcgaggag cgtcaggtca agacttggct cgcccaggga
     2461 gcaagcgcga gcgctcgaac gacgtagccc gcgtgacggg cctcgagcgg caacagtccg
     2521 tccaagtgcg cgagtcgttg ctgcgtccag agcacgaggg gcgccgagcc acagacccgc
     2581 gcgtagcgcc acgccgagcg gtactcctgc cgcgccgcgc gcagcatcga atagagcacg
     2641 cgcgtgcggt ggacacggcg gcgtacgaga tcgggctcgg tgggacgctc gtcggcgctc
     2701 tgctctttga cggcctcgag cttccggcgt gccagcgaga cggcccaagc gcctccgccc
     2761 cgccgccaat cgtcctccca actgccggca tccgtctcga actggcggcc gagggcgacg
     2821 ccgacgagca tccgtcgcaa cgcttcgatc tgccctgtgc ttgcgcccgc gacgtgagcg
     2881 acgccgatgc aagcagggaa caggacggtc tgcttggcga gcgagatgcg tcgatagtc
//
LOCUS       DATIML010000317         6844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2374387, whole genome shotgun sequence.
ACCESSION   DATIML010000317 DATIML010000000
VERSION     DATIML010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6844
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2374387"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VLJ38_05480"
     CDS             <1..724
                     /locus_tag="VLJ38_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38994.1"
                     /translation="LFLFAPLVFLIDARRGFAEAWRRRALAEQALLVIAMVAVVLGVA
                     GLGREGANKNYLFDGYVTSALAAWFTLARLLSSDPLRRGTLLFGAALLGPWAAFPFAQ
                     LVWPGRLGRTELCTSADLPRLEAVANAVARLPQPLFADHDIFSQPWRATGNHYPAVVL
                     DGTWSGIAVREGFAPRDFLEAWLAEQRFASALLPAGVPEIERFRDRGATCSEFPESID
                     GVKFVVCHLAYAANGTPPDTAR"
     gene            complement(732..1466)
                     /locus_tag="VLJ38_05485"
     CDS             complement(732..1466)
                     /locus_tag="VLJ38_05485"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HSU38995.1"
                     /translation="MMLADLTLKARTEARTLARKLGLLAHLGRLKRRADRLLGRDGYE
                     HAFQHALERAVRPGDVVWDVGANVGLYARQFARSAGPGGVVCAFEPMPACLAELQRAC
                     AEYPNVRTFGLALGERAAELSLWTATDPLGATHSLIEHHNHESAAPLTVKVAAGDELI
                     DRGEAPAPNVLKIDVEGFEEDVLKGLARALARPECRSVLLEVHFAILEERGERHAPSR
                     IQSLLRERGFDVAWTDASHLAATRRN"
     gene            complement(1463..2410)
                     /locus_tag="VLJ38_05490"
     CDS             complement(1463..2410)
                     /locus_tag="VLJ38_05490"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSU38996.1"
                     /translation="MRTLLLDPRLPKASELAFGCASLGSRYDRKASLRALAVAFDHGV
                     NVFDTAPSYGQGESEGILGEFAHGRRDGLVISTKVGILPPSAAPKTRRLRAVARRVFA
                     FAPALRARVPRPRSVQVSHGHFEPPQIQASVEASLRALRSNHLDFLFLHDVPAEQALR
                     EDVLALLGTLCDQGKVIRAGASSDPAALVRIDASARARGQPVQFRAAVAAWPEWPAEF
                     TALVRANDPTRPRFGNQPFNGGALSRELDAELTALGPRHEALLRLPLVAGVCDVLVTS
                     MLTPQHIITNCLAVSAPTIPAAALAAVASSLLEPARDAA"
     gene            complement(2422..3234)
                     /locus_tag="VLJ38_05495"
     CDS             complement(2422..3234)
                     /locus_tag="VLJ38_05495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38997.1"
                     /translation="MRENLPYLLGRFSGVRSAYGRTIGGFQRVGALPGLTPAPEEVVR
                     GPRPAALVEALERESAHIGLELSSETVDAIVTACRALPLRQWFTMRQFRFDDVHAGRL
                     PDGSPALIADVLGVDGIAAARAVAHSPRILSALERYMHYRPIGVDVRVLASFAGDFSD
                     DTWRTYGQTLDFHFDVHSYNFIYANYYLTDVDATSGAHVMVHGTHRAKPLPWLFGQAR
                     RSDDEVGRVYPAENVRTIAGPRGLGFLQDSSCYHKALPPKTRDRLMLHIRYY"
     gene            complement(3374..4066)
                     /locus_tag="VLJ38_05500"
     CDS             complement(3374..4066)
                     /locus_tag="VLJ38_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT family protein"
                     /protein_id="HSU38998.1"
                     /translation="MPRTGHREHHRTSRVGWLRAAVLGANDGIVSTAALVVGVAASGA
                     STGSILTSGLAGAVAGAMSMAAGEYVSVQSQADAETADLAIEERELAEEPKRELLELA
                     GIYVKRGLSHELARRVAEELTAKNALDAHARDELGITEAQRARPLQAALASAASFTLG
                     SVLPLGGSWLAPAGRIEAFTTALTLVSLAVTGGVAAFTGGAPILRGALRLVFWGALAM
                     GTTALVGRVFNV"
     gene            complement(4144..6375)
                     /locus_tag="VLJ38_05505"
     CDS             complement(4144..6375)
                     /locus_tag="VLJ38_05505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU38999.1"
                     /translation="MSYSEGLIMNYTTRRTLAGLGLGIGFLGGCSATGNTNANDGLNS
                     GQSGGTGGTVNLGSGGTGASISSGGTGNTIGGISGSSGTVSSAEDGVVPNDDPGNRSI
                     THPTCGIGTCTDFPDAPLVGDGVPANAASLFGDADNFSAGSLCVLEPQLSSGTTPGVM
                     LPANWLRPRFKFNAAGADLFEIRIKNASQKNDLVAYTKSTTWYLPKDIWAGTGTPGMN
                     NVQASGNGAANNGAGAPFTVTIRALNSASPGKPVGMRGDFNVAPVVASGSMVFWTVNS
                     AQVTPDSSKLLGFAIGDEGVAEALTLKELKWAGQMGEDGSVLRGYYDDPKLPGFTDGQ
                     VRCIGCHASTPDGTAVVFTDDWPWAKAVASVGAGTAGQIPSFLSSGASALLKMPWLGT
                     QSMVMAHWKAGDRTLITSYGAKTKSGKSRDKAWFADIYNDPSNPDKLGTHQLAWFDLE
                     ATASVNVAVTDTPVYGQPVDDRQAAAAAAKGTAWGLIATGDTQSAVSPAMNHAGDQIA
                     YVATDYSPDGHPDYTATTADVKVVPYNNRAGGTAQAVKGASDPNSLEYYPSYSADDKW
                     IAFTRAPKPSAQSPDGPYYNRFGQIMIVPAAGGTPVTLVANDPNACAGDDMARGIINS
                     WPKWSPDVFSAHGKTYYFLIFSSARKYGDEFAQPFQLPSSSASDFKGLQDSSQLWLTT
                     IQVDNTTGEVVTYPALYVWNQNRLATNGMGAAIQFSNLTPAWDPFELPPIVISQVPTE
                     PVR"
     gene            complement(6474..>6844)
                     /locus_tag="VLJ38_05510"
     CDS             complement(6474..>6844)
                     /locus_tag="VLJ38_05510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39000.1"
                     /translation="STDDPSIRVGYRGDTCSPVGVEVNITGGGQEETGCTGAVPAANT
                     WYCYVLHVKQAATSVTADLSIDGMDQSYTNHGNPQTEITSQVANVRYLRLGPRSYSGN
                     FESPIYVDDVAVATQPLGCE"
BASE COUNT         1087 a         2280 c         2339 g         1138 t
ORIGIN      
        1 gctcttcctg ttcgcgccgc tcgtgttcct gatcgacgcg cgacgaggat tcgccgaggc
       61 gtggcgccgc cgtgccctcg ccgagcaggc gctgctcgtg atcgcgatgg tagccgtcgt
      121 gctcggagtc gccggactcg gccgcgaagg cgcgaacaag aattatctgt tcgacggtta
      181 cgtcacgagc gcgctcgccg cgtggttcac gctcgcgcgg ttgctctcca gcgatccctt
      241 gcggcgcggc acgctgcttt tcggcgcagc gctgctcgga ccgtgggccg cgttcccttt
      301 cgcgcagcta gtctggccgg gccgcctggg tcgcaccgag ctttgtacca gcgcggatct
      361 gccgcggctc gaagccgtcg cgaacgccgt cgcgcgccta ccgcagcccc tgttcgccga
      421 tcacgacatc ttctctcaac cctggcgcgc cacgggcaat cattaccccg ccgtcgtcct
      481 cgacggcact tggtcgggca tcgccgtgcg cgaaggcttc gcgccacgcg attttctcga
      541 ggcttggctc gccgagcagc gctttgcgag cgcgctgttg cccgcgggtg tgcccgagat
      601 cgagaggttt cgcgatcgcg gtgcgacgtg ctcggagttt ccggagtcca tcgacggggt
      661 gaagttcgtc gtgtgtcact tggcgtacgc ggcgaacggg acgccacccg acacggcgcg
      721 gtgagacgcg ctcagttacg acgcgtcgcc gccaggtgtg acgcatcggt ccatgcgacg
      781 tcaaaaccgc gttcgcgcag caagctttgg atccgcgacg gcgcgtgtcg ctcgccccgc
      841 tcctcgagaa tcgcgaaatg cacctcgagc aggaccgagc gacattcggg ccgtgcgagt
      901 gcgcgcgcga gacccttgag cacgtcttcc tcgaagcctt cgacgtcgat cttgagcacg
      961 ttcggcgccg gcgcctcccc gcggtcgatc agctcgtcgc ccgcggcgac tttcaccgtg
     1021 aggggtgcag ccgactcgtg gttgtgatgc tcgatcaagc tgtgcgtcgc gccgagcgga
     1081 tcggttgccg tccagagcga caattcggcg gcccgttcgc cgagtgccaa gccgaacgta
     1141 cgaacgttcg ggtactcggc gcaggcgcgc tggagctcag ccagacacgc cggcatcggc
     1201 tcgaacgcgc agacgacgcc gcccgggccc gcgctgcgcg cgaattggcg cgcatagagt
     1261 ccgacgttcg ccccgacatc ccagactacg tcgcccggcc gcaccgcgcg ctcgagcgcg
     1321 tgttggaacg cgtgctcgta gccgtcacgg ccgagcaaac gatccgcgcg gcgcttcagc
     1381 cggccgaggt gcgcgagcaa gccgagcttg cgcgcgaggg tgcgggcttc ggttctcgcc
     1441 ttgagcgtca aatctgcgag catcatgcgg cgtcacgtgc gggctcgagc agggacgagg
     1501 cgacggcggc gagcgcggct gccgggatcg tcggtgcgga gaccgcgagg caattggtga
     1561 tgatgtgctg tggcgtaagc atggaggtaa cgagcacgtc gcacacgcct gcgacgagcg
     1621 ggagccgcaa gagcgcttcg tggcgcggcc cgagcgccgt gagctccgcg tcgagctcac
     1681 gcgaaagcgc gccgccgttg aagggctgat taccgaaacg cggacgcgtg gggtcgttcg
     1741 cgcgcacgag cgccgtgaac tctgccggcc actccggcca ggcggcgacg gctgcacgaa
     1801 attgcacggg ctgcccgcgg gcccgcgccg acgcgtcgat gcgaacgagc gcggcgggat
     1861 cgctggaagc gccggcgcgg atcaccttgc cttggtcgca cagcgtgccc agcagcgcaa
     1921 gcacgtcttc ccgcaaggcc tgttcggcgg gcacgtcgtg caaaaagagg aagtctaggt
     1981 ggttcgagcg caaggcgcgc aggctcgcct cgacgctcgc ctggatctgc ggcggctcga
     2041 agtggccgtg actcacctgc accgagcgcg gccgtgggac acgcgcacgc agcgccggcg
     2101 cgaacgcgaa cactcgccgc gcgactgccc ggagccgtcg cgtcttcggc gcggcgctcg
     2161 gcggcaaaat gccgaccttg gtcgagatca cgaggccatc gcggcgcccg tgcgcgaatt
     2221 caccgaggat gccctccgat tcaccctggc cgtacgacgg cgccgtgtcg aacacgttca
     2281 cgccgtggtc gaacgccacc gcgagcgcgc gcaaggacgc cttgcgatca taccggctcc
     2341 cgagcgaggc gcagccgaac gcaagctcgg aggctttcgg cagccgggga tcgaggagca
     2401 gcgtgcgcat cgaccgagcg ttcagtagta acggatgtga agcatcaagc gatcgcgcgt
     2461 cttcggcggc agcgccttgt gataacagga gctgtcttgg aggaacccga gcccgcgtgg
     2521 gcctgcgatg gtgcggacgt tttcggcggg gtaaacgcgc ccgacctcgt cgtcgctgcg
     2581 gcgcgcttga ccgaagagcc aggggagcgg cttggctcga tgcgtgccat gcaccatgac
     2641 gtgcgcgccc gatgtcgcgt cgacgtcggt caggtagtag ttcgcgtaga tgaagttata
     2701 gctgtggacg tcgaaatgaa agtcgagcgt ctggccgtag gtgcgccagg tatcgtccga
     2761 aaagtcgccc gcaaagctcg cgagcacgcg cacgtcgacg ccgatggggc gatagtgcat
     2821 gtagcgttcg agggcgctca ggatgcgggg agaatgcgcg accgcacgcg ccgcggcgat
     2881 gccgtccacg ccgagcacgt cggcgatcag cgccggactg ccgtccggaa gccgtccagc
     2941 gtgcacgtcg tcgaagcgga attgccgcat cgtgaaccac tgacgtaacg gcagcgcgcg
     3001 gcacgccgtg acgatcgcgt ccacggtttc gctcgaaagc tcgagcccga tgtgcgcgga
     3061 ctctcgctcg agcgcctcga cgagcgccgc cggacgcggt ccgcgcacga cttcctccgg
     3121 cgccggcgtg agcccgggca gcgcgcccac ccgctgaaat cccccgatgg ttcgcccgta
     3181 cgcgctgcgg accccgctga aacgaccgag caggtacggc aaattctcac gcaacgggac
     3241 gttctgtaat cggctcagca gattgctcgc ccacgcgccc attgctcgtt accagcccga
     3301 aaagcccggg caatcctcag cccgcgtttt ctcacccgat ccacgcagtg tcaagcgcgc
     3361 gtccggcggg cgatcacacg ttgaacacgc gccccacgag cgcggtcgtg cccatcgcga
     3421 gcgcgcccca gaacacgagg cgaagcgcac cgcgcaggat gggcgcgccg cccgtgaacg
     3481 ccgcgacccc gccagtgacg gccaagctca cgagcgtgag cgccgtcgtg aacgcttcga
     3541 tgcgccctgc cggcgcgagc cagctcccgc cgagcggaag caccgagccg agcgtaaacg
     3601 acgccgccga ggcgagcgcc gcttggagcg gtcgagcgcg ctgcgcctcg gtgatgccga
     3661 gctcgtcgcg cgcgtgagcg tcgagcgcat tttttgccgt gagctcctcg gcgacacggc
     3721 gcgcgagctc gtgcgagagc ccgcgcttga cgtaaatgcc cgcaagctcc aaaagctcgc
     3781 gcttcggttc ttcagcgagc tcacgctctt cgatcgccaa atccgccgtt tcggcgtccg
     3841 cttgcgactg caccgaaacg tattcgcccg cggccatcga catcgccccc gcgacggcac
     3901 ccgcgagccc gctcgtgagg atggagccgg tggacgcacc gctcgccgca acgcccacga
     3961 cgagcgccgc cgtcgaaacg atgccgtcgt tggcgccgag cacggcggca cgcagccacc
     4021 ccacgcggct cgttcgatga tgttcccgat ggcccgtcct cggcatgcag cgttcgtaca
     4081 ccgggaccgc cgccgttgaa cacggcggtc gcgggtttca cgatttgcgc cgggcggccg
     4141 ggctcagcgc acgggctcgg tcggaacttg gctgatgacg atgggcggca gctcgaaggg
     4201 atcccaggca ggcgtgaggt tactgaactg aatcgccgcg cccatgccgt tcgtcgcgag
     4261 gcggttctgg ttccagacgt agagtgcggg atacgtcacg acctcgcccg tcgtgttgtc
     4321 gacttgaatg gtcgtgagcc agagctgcga tgagtcttgc aagcctttga agtcgctcgc
     4381 cgacgacgac ggcagctgaa atggttgcgc gaactcgtcg ccgtatttgc gcgctgacga
     4441 gaagatcaag aagtaatacg tcttgccgtg agcggagaag acgtcgggcg accactttgg
     4501 ccagctgttg atgatgccgc gcgccatgtc gtcacccgcg catgcgttgg gatcgttggc
     4561 gaccagcgtc accggcgtcc cgcccgcagc ggggacaatc atgatctggc cgaagcggtt
     4621 gtagtacggg ccgtcgggtg actgggcgct cggcttcggc gcgcgcgtga acgcgatcca
     4681 cttgtcgtcg gcagaatacg acgggtaata ctcgagggaa ttcgggtcgg acgcgccttt
     4741 gacggcctgg gcggtgccgc ccgcgcggtt gttgtacggg acgaccttca cgtcggccgt
     4801 ggtcgccgtg tagtcggggt gaccgtcggg cgagtagtcc gtcgccacgt acgcgatctg
     4861 gtctccggcg tggttcatcg cgggcgaaac ggcgctctgc gtatcgcccg tcgcgatgag
     4921 accccaagcg gtacccttcg cagccgcggc ggcagcctgc cgatcgtcca cgggttggcc
     4981 atagacgggg gtatcggtga ccgcgacgtt gaccgaagcc gtcgcctcga ggtcgaacca
     5041 ggcgagctgg tgcgtgccga gcttgtcggg gttgctcggg tcgttgtaga tgtcggcgaa
     5101 ccacgcctta tcccgcgatt tgccggattt ggtcttcgcg ccgtagctcg tgatgagcgt
     5161 gcgatcgccc gctttccagt gcgccatgac catggattgc gtgccgagcc atggcatctt
     5221 gagcagcgcg ctcgcgcccg aggagaggaa cgaggggatc tggcccgccg tgcccgcgcc
     5281 gaccgaggcc acggctttcg cccacggcca gtcgtcggtg aagacgaccg ctgtgccgtc
     5341 gggcgtcgac gcgtgacagc cgatgcagcg cacctgtccg tcggtgaagc ccgggagctt
     5401 ggggtcatcg tagtaaccgc gcaaaaccga gccgtcctcg cccatctgcc cggcccactt
     5461 gagctccttc agcgtgagcg cctccgccac accttcgtcg ccgatggcga agccgagcag
     5521 cttgctcgaa tcgggcgtca cctgcgcgga gttcacggtc caaaacacca tgctgccgga
     5581 cgccacgacg ggggcgacgt tgaaatcgcc gcgcataccg acgggcttgc cgggtgacgc
     5641 gctgttcagg gcgcgaatcg tcaccgtgaa aggcgccccg gcgccgttgt tcgcggcgcc
     5701 gttgcctgaa gcctgcacgt tgttcatgcc gggcgtaccc gtaccggccc agatgtcctt
     5761 cggcaggtac caggtcgtgc tcttcgtgta agcgacgagg tcgttctttt gcgaagcgtt
     5821 cttgatgcgg atctcgaaaa gatccgcgcc cgccgcgttg aacttgaagc gcgggcgcag
     5881 ccagttcgcc gggagcatca cgccgggtgt cgtgcccgac gagagctgcg gctcgagcac
     5941 gcagagactc cccgccgaga agttgtcggc atcgccgaag aggctcgcgg cgttggccgg
     6001 aacgccgtcg cccacgagcg gcgcgtcggg aaagtccgta caggtaccga ttccacacgt
     6061 cggatgcgtg atgcttcggt tgcccggatc gtcgttcggg acgacgccgt cctcggcgct
     6121 gctcacggtg ccgctcgagc cgctgatgcc accgatggtg ttaccggtgc caccgctgct
     6181 gatgctagcg ccagtgcctc cggagccgag attgacggtg ccccccgttc cgccactctg
     6241 gcccgagttc agtccgtcgt tggcgttcgt gttacccgtt gccgaacagc caccgagaaa
     6301 cccgatgccg aggccgaggc cagcgagggt gcgtcgcgtc gtgtagttca tgatcaagcc
     6361 ctcggagtat gacacgagcg ggggccgcgt catccacgat ccgggtgtca gggggggagt
     6421 acccgtgggg gcctgccaga attttctacg cgcgggcgag cctgcggaga gcactactcg
     6481 cacccgagcg gctgggtcgc gaccgctacg tcatcgacat aaatgggact ctcgaaattg
     6541 ccggaatagg agcgcggacc gagcctcagg taccggacat tggcgacctg actcgtgatc
     6601 tccgtctgcg ggttgccgtg gttcgtgtag gactgatcca tcccgtctat ggagagatcg
     6661 gccgtgacgc tcgtcgccgc ttgtttgacg tgcaggacat agcaatacca ggtgtttgca
     6721 gcggggaccg cgcccgtgca gccggtctcc tcctggccac cgcccgtgat gttcacttcc
     6781 acgcccacgg gactacacgt atcgccacga tagccgacgc gaatcgatgg atcgtccgtg
     6841 ctcg
//
LOCUS       DATIML010000318         3942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_645459, whole genome shotgun sequence.
ACCESSION   DATIML010000318 DATIML010000000
VERSION     DATIML010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3942
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_645459"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..589
                     /locus_tag="VLJ38_05515"
     CDS             266..589
                     /locus_tag="VLJ38_05515"
                     /inference="COORDINATES: protein motif:HMM:NF024546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRL-like family protein"
                     /protein_id="HSU39001.1"
                     /translation="MKHLIMVAGLLGLATSLGACFPIAGKNYGMGGIYSDVAFNERAT
                     DNALGAKRGEACASNILNVVSTGDASAATAAKQAGITKIASIDGTASNILFFYSTYCV
                     VVTGE"
     gene            672..1559
                     /locus_tag="VLJ38_05520"
     CDS             672..1559
                     /locus_tag="VLJ38_05520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39002.1"
                     /translation="MKLGLKVAIPVLIGFSLATGTLSAQTPPAVTDTAIADAVELKDG
                     TFLRGLIIEVEPASHVSLRLPDGQVRRISVENVKSAERGGKPLELGAASTASPSATPL
                     VAGAAAATPPSAGPAAPGASPAPTVGGPEPGSDLGRVLAAIPGPRIRLEAQANRSAFL
                     ERRIGDADEDVVAYHLVCKVPCSVELPAADPVPYRIGYGRFQPTNWFTLPKYSARVKA
                     DLASDMYTVWTRSMLVGGFVFGAVGGSIYGINEATGKKPWAHDTGLVLLGLSGACFLT
                     SGLFWLFSPHTTYTIERTP"
     gene            1626..3458
                     /locus_tag="VLJ38_05525"
     CDS             1626..3458
                     /locus_tag="VLJ38_05525"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HSU39003.1"
                     /translation="MVAASFLDEAAKSERSGGSPPQRRRWSRLWRLYLLRAELRLAPS
                     EAQRLFLLTLAIGVVCGLVAVSFHVSIDFAENQLIERALAAGGRAWPVWTLVTPVLGG
                     LACGALLEFVVPNARGSGIPQVKAAFAVAPGFVPLRDAIGKFFVGVLQIGSGSSLGRE
                     GPTVQICAGVASFLGRMFSVSEQTQRRLLPVGAAAGIAAAFNAPIAAVTFTIEEVVGN
                     LDQSLLSGVIVAAALAAVIERSVLGENPVFSVPETYGLRHASSLAIYAVIGLVAAAAS
                     IAFTESLLRLRLHMRQLKRPPRWVRPALGGAVTGALAVAAVLVFQARGINGGGYQTLG
                     QALNGGLAWHVMLVLGAFKLVATVFSYSSGGAGGVFAPTLFIGGMLGGALGTLDARWL
                     GHIDEPIGGFALVGMGAVFSGVIRAPITSVLIIIEMTRGYGLILPLMIANMTAYVLAR
                     RFRSETLYEALLQQDGVVLHRDGSHVENAEIAPLIATTELVTFVPETSAREVLRLVEG
                     RDQRHVYPVLGPERRLLGVVTPDELAILSTSPELLPVTTAHDLMRSAPSIGPHASLGL
                     AIETMLASGLRELPITDSQQRLLGVIDDRCLASALGRGRAGVKS"
     gene            complement(3448..>3942)
                     /locus_tag="VLJ38_05530"
     CDS             complement(3448..>3942)
                     /locus_tag="VLJ38_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSU39004.1"
                     /translation="RRKNAQPAPEGQRALGEVLGFLQLLWDVSHELESISKRMRANVG
                     VTGPQRLVLRLVAHYERPSPGELARALRVHPSSLTGVLRRLERAGLIRRVPDPADGRR
                     AIVSLSAKGQRLNDRQDGTAESAVRRALKALGPTRTATARAVLRKLADELAVESRGSG
                     PTTT"
BASE COUNT          555 a         1342 c         1348 g          697 t
ORIGIN      
        1 ggggccggcg cgcgctcgcg cggtctcgtc gcttcaccgc gcgcgcccga gcacgaaacc
       61 cgccagccgg ccagcgtcgg cgcggcccga tgcgcggcgt gaactcgtca tgacgagcgg
      121 gaattgctgc acattcaaag agcgcgcggg tcccgtagca agcttgacac gagcctttgt
      181 ggcccactag cttggccgcg caactaaggt gccgtgggat cctgtccgcc gcaccttggg
      241 accaactcgg gaaggctaga tagaaatgaa gcacttgatc atggtggctg ggctcctcgg
      301 cctggcgacg tcgctcggcg cctgtttccc cattgccggt aagaactacg gcatgggcgg
      361 catctactcc gacgttgctt tcaacgagcg tgcgaccgac aacgccctcg gcgccaaacg
      421 cggtgaagcg tgcgcctcca acatcctgaa cgtcgtgtcg accggcgatg cttcggcagc
      481 cacggccgcc aagcaggcgg gcatcaccaa gattgcctcc atcgacggca cggcttccaa
      541 tatcctcttt ttctacagca cgtactgcgt cgtcgtcacc ggcgagtgag cctcgcactc
      601 gctccacgcg cggctgggcg gtgccggtaa cggcgcccgc ccggccggct ttcgatgtta
      661 gattcgcgcg catgaagctc ggcctgaagg tcgccatccc cgtgctaatc gggttttcgt
      721 tggcgaccgg caccctcagc gctcaaacgc cgcccgccgt gaccgacacg gcgatcgccg
      781 acgccgtcga gctcaaagac ggcaccttct tgcgaggtct catcatcgag gtcgagccgg
      841 ccagtcacgt cagtctacgc ctgccggacg ggcaggttcg gcgtatctcg gtcgagaacg
      901 tgaagtccgc cgagcgaggc ggaaagccgc tcgagctcgg cgcagcgtcg acggcgtcgc
      961 catccgcgac tccgctcgtc gcgggagctg cggcggcaac cccgccgtct gccggcccgg
     1021 cagcgcccgg agcctcgccc gcgcctaccg tcggcggccc cgaaccaggg agcgatctcg
     1081 gtcgcgtgct cgccgcgatt ccgggaccgc gcattcgact cgaagcgcag gcgaaccgtt
     1141 ccgcctttct cgagcggcgc atcggcgacg cggacgaaga cgtggtcgcg tatcacctcg
     1201 tctgtaaagt cccttgcagc gtcgagctgc cggcggcgga tccggtgccg tatcggatcg
     1261 gctacggcag gtttcagccc acgaactggt tcacgctgcc gaagtacagc gcgcgcgtga
     1321 aggccgacct cgcgagcgac atgtataccg tctggacgcg ctcgatgttg gtgggcggct
     1381 tcgtgttcgg cgctgtcggc ggctccatct atggcatcaa cgaggcaacc gggaagaagc
     1441 cttgggccca cgacacgggt ctcgtgttgc ttggcctgag cggtgcgtgt ttcctcacct
     1501 cgggactctt ttggctcttc agtccgcaca ccacgtacac gatcgagcgc accccttgag
     1561 tcgcgtccga ctcccgctgc cgtaattgcg aaggttcgcc cctgcgttga agaggattcg
     1621 ggtcagtggt agctgcttcg ttcttggacg aagcggcgaa gagcgagcga agtggcggct
     1681 cgccgccgca gcggcgtcgc tggtcgcggc tctggcggct gtatttgttg cgcgccgagc
     1741 tgcggctcgc gccgagcgaa gcccagcggc tgttcttgct cacgctcgcg atcggtgtcg
     1801 tgtgcgggct cgtggccgtg agctttcacg tcagcatcga cttcgcggaa aaccagctga
     1861 tagaacgcgc tctcgccgct ggcggcaggg cgtggcccgt gtggacgctc gtgacgcccg
     1921 tgctcggagg actcgcctgc ggcgcgttgc tcgagttcgt cgtgccgaac gcgcggggca
     1981 gcgggatccc gcaggtgaaa gccgcgttcg ccgtggcgcc gggcttcgtg ccgctccgcg
     2041 acgccatcgg caagttcttc gtgggcgtgc tgcagatcgg ttccgggtcg tcactcgggc
     2101 gcgaggggcc gacggtgcag atctgcgccg gtgttgcgag ctttctcggg cgcatgttct
     2161 cggtttcgga gcagacgcag cggcggctct tgcccgtggg cgcggccgcc ggcatcgcgg
     2221 ccgctttcaa cgcgcccatc gcggccgtga cgttcacgat cgaggaggtc gtgggcaatc
     2281 tcgaccagag cttgctctcc ggcgtcatcg tcgcggccgc gctcgccgcc gtgatcgagc
     2341 gcagcgtgct cggcgaaaac cccgtgttct ccgtgccgga gacgtacggc ctgcgccacg
     2401 cctcgtcgct ggcgatttac gccgtgatag ggctcgtcgc tgccgccgcc tcgatcgctt
     2461 tcacggagtc gctgctcagg ctgcggctgc acatgaggca gctgaaacga ccgccgcgct
     2521 gggtgcggcc ggcgctcggc ggcgccgtca cgggtgcgct cgcagtcgcg gccgttctgg
     2581 tcttccaggc gcgcggtatc aacggcggcg gctaccagac gctcggacaa gcgctcaacg
     2641 gtggcctcgc ttggcacgtg atgctcgtgc tcggcgcgtt caagctcgtc gcgacggtat
     2701 tttcgtactc gagcggcggc gcgggcggcg tgttcgcacc caccttgttc atcggcggca
     2761 tgctcggcgg tgcgctcggc acgctcgatg cgcgctggct cggtcacatc gacgaaccga
     2821 tcggcggctt cgcgctcgtc ggcatgggtg ccgtcttttc tggcgtgatc cgcgcgccca
     2881 tcacttcggt cctgatcatc atcgagatga cccggggcta cgggctgatc ttgccgctca
     2941 tgatcgccaa catgacggct tacgtgctcg cgcgacgttt ccggagcgag acgctgtacg
     3001 aggcgctgct ccagcaagac ggcgtcgtcc tgcatcgcga cggctcgcac gtggagaacg
     3061 ccgaaatcgc gccgttgatt gcgacgaccg agctcgtgac cttcgtgccc gagacgagcg
     3121 cgcgcgaagt gctgcgcctc gtcgaagggc gcgatcagcg ccacgtctac cccgtgctcg
     3181 gccccgagcg acgcttgctc ggcgtggtca cgcccgacga gctcgcgatt ttgagcacgt
     3241 cgcccgagct cttgcccgtc acgaccgcgc acgatctgat gcgcagcgcg ccgagcatcg
     3301 gtccccacgc gtcgctcggc ctcgcgatcg agaccatgct cgcgagcgga ttgcgcgagc
     3361 tgccgatcac cgacagccag cagcgtttgc tcggcgtcat cgacgatcgc tgcctggcct
     3421 cggcgctcgg ccgcgggcgg gcaggcgtca agtcgtagtc ggcccggagc cgcggctctc
     3481 gacggcgagc tcgtccgcga gcttacgcag cacggcgcgc gccgtggcgg tgcgggtcgg
     3541 cccgagcgcc ttgagcgcgc gcctcacggc tgattctgcg gtgccgtctt ggcgatcgtt
     3601 caggcgctgg cccttggcgc tcaggctcac gatcgcgcgc cgcccgtcgg cgggatcggg
     3661 aacacggcga atgagtcctg cgcgctcgag ccggcgcagg acgcccgtga gcgagctcgg
     3721 gtgaacgcgg agtgcgcggg cgagctcacc gggtgacggg cgctcgtaat gcgccacgag
     3781 gcgcagcacc aagcgttgtg gtcccgtcac gcccacgttg gcgcgcatgc gcttcgagat
     3841 ggattcgagc tcatgggaga cgtcccaaag gagctggagg aatccgagca cttcgccgag
     3901 tgcgcgctgc ccctcgggcg ccggctgcgc atttttccgt cg
//
LOCUS       DATIML010000319         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3242315, whole genome shotgun sequence.
ACCESSION   DATIML010000319 DATIML010000000
VERSION     DATIML010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3242315"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..727)
                     /locus_tag="VLJ38_05535"
     CDS             complement(<1..727)
                     /locus_tag="VLJ38_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39005.1"
                     /translation="MKLSARFGVAFGLALGLVSAVAEAVPAAAPAVAKAGGGQAALAV
                     GFDAQGELRAAVCSQAPCGVAGGVALGLPRELKGNRDKARLSIVGIGAGRRVVIVSVP
                     GDRPDKRFEAVVAAPLAGTAPVVLFAGLTGLAEGEDGVRHGGLVVVAGPDETGARSVA
                     IGEAREELAICGRPTILAPRQIDARDLTLRPAKVQRLDASERAAAVRLAAERVAEGAP
                     LGPQFLHAVGASSAVGDPGAVTDG"
     gene            complement(724..>1596)
                     /locus_tag="VLJ38_05540"
     CDS             complement(724..>1596)
                     /locus_tag="VLJ38_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39006.1"
                     /translation="LPKPESLSGKVGVLDLAFAGVGGKSGSFESVTLPFIQGLASRLR
                     IWVDHHDHDEHGRYANDPRFVLATKAEHGACPEMIDQALVERVGKLDTIVCHTDFDGL
                     ASAAKWLRGGLEPYPGADADARAIDTRLGTPGPNADRMDRALRGRPNDHALMGVIVRH
                     LASGLEDVALWEPIDRAGAELLPIERETRRAAEAYRRLRPNVAYVDVTEGYGRLDKTL
                     LLLLGQEREPVSVVLDRNNVSIAARFDSGLNFLELFELDGGMPTRVSLPRGRLGDVLR
                     RLRVDPAEVPEAVR"
BASE COUNT          242 a          613 c          520 g          221 t
ORIGIN      
        1 taccgtccgt gacggcgccg ggatcaccga cagcactcga cgcgcccacg gcgtgcagga
       61 actgcggacc gagcggcgcg ccctccgcga cgcgctcggc cgccaaacgt accgccgcgg
      121 cccgctcgct cgcgtcgagg cgctgcacct tggcgggccg tagcgtgagg tcccgcgcat
      181 cgatctggcg gggcgccaga atcgtcgggc gcccgcaaat cgcgagctct tcgcgtgctt
      241 ccccgatggc cacgctgcgc gctcccgtct cgtcgggccc ggcgacgacc accagcccgc
      301 cgtgccgcac gccgtcttcg ccctcggcga gccccgtgag tccggcgaaa aggacgacgg
      361 gcgccgtacc cgcgagcggg gccgcgacca ccgcttcgaa gcgcttatcc ggacgatccc
      421 cgggcacgct cacgataacg actcgacgcc cggcgccaat cccgacgatc gacagccgcg
      481 ccttatcgcg attccctttg agctcgcgcg gcaacccgag cgcgacgccg cccgcgacac
      541 cgcacggcgc ttgcgagcac acggcggcac gcagctcgcc ctgagcatcg aatcccaccg
      601 cgagcgccgc ctgcccgccg cccgctttgg ccaccgcggg tgcggcggcc ggcaccgcct
      661 ctgctaccgc actcacgagc cccagcgcga gaccgaatgc tacgccgaaa cgcgccgaca
      721 gcttcatcgc accgcctccg gaacctcagc cggatcgact cgcagccggc gcagcacatc
      781 cccgaggcgc ccgcgcggta acgacacgcg cgtgggcatg ccgccgtcga gctcgaacag
      841 ctcgaggaaa ttcaacccgc tgtcgaagcg cgccgcgatg ctcacgttgt tgcggtcgag
      901 tacgacactc acgggctcgc gttcttggcc gagcaagagc agcaacgtct tgtcgaggcg
      961 accgtagcct tccgtcacgt cgacgtacgc cacgttcggc cgcaagcggc gataagcctc
     1021 cgccgcgcgg cgtgtctcac gctcgatggg cagcagctcg gcgccggcgc gatcgatggg
     1081 ctcccagagc gccacgtcct cgagaccgct cgcgaggtgc cggacgatga cgcccatgag
     1141 cgcgtgatcg ttcggccgcc cccgcagcgc tcgatccatg cgatccgcgt tcggacccgg
     1201 cgtaccgagc cgcgtgtcga tggcgcgcgc gtcggcgtcc gcgccgggat acggctcgag
     1261 cccgccgcgg agccacttgg ccgcgctcgc gaggccgtcg aagtccgtgt gacagacgat
     1321 ggtgtcgagc ttgccgacgc gttcgaccag cgcctggtcg atcatttccg gacaggctcc
     1381 gtgctcggcc ttcgtcgcga gcacgaagcg cgggtcgttc gcgtagcggc cgtgctcatc
     1441 gtgatcgtgg tggtcgaccc agatgcgcag gcgactcgcg agcccctgaa tgaacggcaa
     1501 ggtgacgctt tcgaagctgc cgctcttgcc gccgacaccc gcaaacgcga ggtcgagcac
     1561 cccgaccttg ccgctcaggc tctcgggttt cggtaa
//
LOCUS       DATIML010000320         2422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4976088, whole genome shotgun sequence.
ACCESSION   DATIML010000320 DATIML010000000
VERSION     DATIML010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4976088"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            255..2123
                     /locus_tag="VLJ38_05545"
     CDS             255..2123
                     /locus_tag="VLJ38_05545"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39007.1"
                     /translation="MNVELRSGSRLGRYELLLELGKGGMASVWIARERGDMGDRLVAL
                     KAMLPELARKSDFRTMFLEEGQVVRSIEHPNVVRVYEVGEDRGVLFMAMEWVRGDSLQ
                     RVMVQAQRRKPIPSEMAVRIMADTAAGLHAAHELRGWDGELRNLVHCDVSPHNILVGV
                     DGRSRLVDFGVANGTALGDPEKGDRVVGKFGYMSPEQAHGERIDRRSDVFSLGIVLYE
                     LTTGERLYRGELPAHTLRLAQEARIPNPLRVLADYPERLASIVLKALATDRDQRFQTS
                     EELRLALEQFLVQERTLISHAAVGKLVHKVLKQRLERQDEELREALVATDGVVQGGLV
                     PTARPGGGRPSDPTSPPFASPEVSVSLPPVRRAPVGAVLFGVLGVASALGSIIWTNLQ
                     AKPNALVTTPGGTPTLQRGANNADPRLASADRHGVSLDSIPVADTDSPSHERAVTHAS
                     APRRTKVTLEEEGVAAPNPPPNPAPSPPSNRPGTAEAVELEETQPAPAPKPAASVTKA
                     AATETALPEPAERPTPPAPLPPAGERGPVSRGAALSALAAAASRATACSNPDGPAGSA
                     RAMVTFSPDGPVTEVSLPPPFAGTSVGSCVVSAFRSAHVPPFSGGSVTLPQSFRVP"
     gene            2206..2403
                     /locus_tag="VLJ38_05550"
     CDS             2206..2403
                     /locus_tag="VLJ38_05550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39008.1"
                     /translation="MPGIRKVTANLPTEALARAQKLTGKGVTATLIDALEALDRSAKR
                     NALRQLRGKIAFELDLEKTRR"
BASE COUNT          392 a          866 c          793 g          371 t
ORIGIN      
        1 acgcccgggg aaacgatcct gctcgacgtc accatgaaag tgcgacggcc cgcaggtctc
       61 tcgcgggaag gcgcggcgga gactgccgcc ccggtggatt cttcgccgtg aagtgttcgt
      121 gccgagtcgt gaaacacgag cggccggcgc tcgcgctgcc cgcaattctg tggcatcaat
      181 ttccatgatc tcgagccctc tcggggtcgg accggcggcc cccacggcgc cgccgcctcg
      241 cgccgcctaa ctgcatgaac gtcgagctcc gatcggggtc gagacttgga cgctacgagc
      301 ttcttttgga gctcggcaaa ggcggcatgg cgagcgtttg gattgcgcgc gagcgcgggg
      361 acatgggcga ccgactcgtc gcgctcaagg ccatgctgcc ggagctcgcg agaaagtccg
      421 actttcgcac catgttcctc gaggaggggc aggtcgtgcg cagcatcgag cacccgaacg
      481 tcgtacgcgt gtacgaagtc ggcgaggatc gcggggtgct gttcatggcc atggaatggg
      541 tgcgcggcga ctcgctgcaa cgcgtcatgg tgcaggctca gcgccgcaag ccgatcccgt
      601 ccgaaatggc cgtccgcatc atggccgaca cggccgccgg cctccacgcc gcgcacgagc
      661 ttcgcggctg ggacggcgag ctccgaaacc tcgttcactg cgacgtttca ccgcacaaca
      721 tcctggtcgg cgtcgacggc cgctcgcgtt tggtcgactt cggcgtcgcc aacggcaccg
      781 cgctcggcga tccggaaaag ggcgaccgcg tcgtcggcaa gttcggctac atgtcgcccg
      841 agcaggcgca cggcgagcgc atcgatcgca ggagcgacgt gttttcgctc gggatcgtgc
      901 tgtacgagct cacgacggga gagcgccttt atcgcggcga gctgcccgct cacaccctgc
      961 ggctcgccca ggaagcgcgc atcccgaacc cgctgcgcgt cctcgccgat taccccgagc
     1021 ggctcgcgag catcgtgctc aaggcgctcg ccaccgaccg cgatcagcgc tttcaaactt
     1081 cggaagagct acgcctcgcc ctcgaacagt tcctggtcca agagcgcacg ttgatctcgc
     1141 acgctgcagt cggcaagctc gtgcacaagg tgctcaagca gcgcctcgag cgccaagacg
     1201 aggagctgcg tgaagcgctg gtcgcgaccg acggcgtcgt acaaggcggg ctcgtcccca
     1261 ccgcacgtcc gggcggcggc cgtccttccg atccgactag tcctccgttc gcgagcccag
     1321 aagtatcggt ctcgttgccg ccggtacggc gcgcgcccgt gggcgcagtg ctcttcggag
     1381 tgctcggcgt ggcctcggcg ctcggttcga tcatctggac gaatttgcag gcgaagccga
     1441 acgcgctcgt cacgacgccg ggcggcacgc cgacgctgca gcgcggggcg aacaacgcgg
     1501 acccgcgcct cgcgtccgcc gaccgccacg gcgtgagcct cgacagcatt cccgtcgccg
     1561 acaccgattc cccctcgcac gagcgcgccg tgactcacgc gagcgcgccc cggcgcacca
     1621 aggtaacgct cgaggaggag ggcgtggccg cgccgaatcc gccgccgaat ccagccccga
     1681 gcccgccctc gaaccgaccg ggcacggcag aggctgtgga gctggaagag actcaacccg
     1741 cgccggcgcc gaagcccgcg gcgagcgtca ccaaggcggc cgccaccgag accgcgcttc
     1801 ctgagcccgc ggagcgtccc accccaccag cgcctctgcc gccggctgga gaacggggcc
     1861 cggtcagccg tggggcagca ctctccgcac tcgcggccgc cgcctcgcgc gcaaccgcct
     1921 gctcgaatcc ggacggaccc gccggctcgg cgcgcgccat ggtgacgttc tctcccgacg
     1981 ggcccgtgac ggaagtttcg ttacccccgc ccttcgccgg cacatccgtc ggctcgtgcg
     2041 tcgtctccgc gtttcgctcc gcgcacgtcc cgccgttcag cggcggctcg gtcacgctgc
     2101 cgcagagctt tcgggtgccg taaagccgag cgctcgagct ctcgaagctc aggtgaccgc
     2161 ctgaccgtat tctagtgtgt attttgccat atgctagact ggtgcatgcc tggcattagg
     2221 aaggtcacgg ccaatttacc gacggaggcg ctcgcccgcg cgcagaagct gacgggcaag
     2281 ggcgtcacag ccacgctgat cgacgcattg gaagcactcg atcgcagcgc gaagcgcaac
     2341 gcgctccgtc agctacgcgg caagatcgcg ttcgagctcg acctcgaaaa gacgcgtcga
     2401 tgatcctcgt cgatacatcg gc
//
LOCUS       DATIML010000321         2649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3819234, whole genome shotgun sequence.
ACCESSION   DATIML010000321 DATIML010000000
VERSION     DATIML010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3819234"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1326
                     /locus_tag="VLJ38_05555"
     CDS             <1..1326
                     /locus_tag="VLJ38_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39009.1"
                     /translation="ATSANGAFPAVSQLVSDPADPDHLVLRSTFGLLVTRDRGQTWDW
                     LCEAGLGYKDVQPPMAVLAGGVILLGVPNGISRGGTSGCDFALATGPDAAVFDLARVP
                     AEADGAVAVSLSGTTAQLWRTHDAGLSFIALGDPISGFIPATVDVAPSDANVIYLSGL
                     LGTQGSLLRSSDGGISYATFAIPNTTTAHRPYIAAVDPNDADVVYVRLDGEPSELEVT
                     RDGGKTFTAPLTTEVPALGLALSPDGQTVIASNSFDGTFRADAATLAFEKVACQGPSC
                     LSFTDSGLFGCGDQRVDGFVVGESADRGRSFQRVVDLTCIRGPAACGSDTSVGQFCPE
                     AWPPIQAQLGATECSPPDVRPYTGCFDGIAGDSGSEPAGGSTASGGTTGSPGQSAGTG
                     AADTGGQRAGGGGGCQVAQGRASGSSAWLLAGALGWFGLRRRRVQAWSP"
     gene            1323..1781
                     /locus_tag="VLJ38_05560"
     CDS             1323..1781
                     /locus_tag="VLJ38_05560"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HSU39010.1"
                     /translation="MTLRRASRVVLRRAAWLLLLPATACSSPAKPSTGTCVEGLRTDC
                     SPLYDPPTYSTIFEKILHPTCAQGMGTCHTADAAMGGLVFEDEDDAYARLLGDAGGKA
                     RVAPGDPACSLLVERLEGKTSDVRMPPGPTPLSEAARCDIVQWISQGAAR"
     gene            1778..>2649
                     /locus_tag="VLJ38_05565"
     CDS             1778..>2649
                     /locus_tag="VLJ38_05565"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiheme c-type cytochrome"
                     /protein_id="HSU39011.1"
                     /translation="MKKWRHALGQRVGSIAATGVLAACTEAVPPTPAATTYLDRDTLM
                     DPETCSTCHPNQYAEWAGSMHAYASDDPLFLAMNARGQREAGIGKFCVNCHAPLAVRT
                     GATEDGLNLAGLPQKLKGVTCFYCHSVTEVTGTHDNPLVLAADDTMRGEYTDPVPNSA
                     HRSTGSHLHDRDLRDSATLCGACHDIVNQHGTELERTFAEWQASVFSEPSVGTTCGQC
                     HMDQSTNLEPAADAPGVFARRTHDHLFPAVDVPFTGDTTELERRVQSFLDTALQSAIC
                     VRGAGALTDLRVVL"
BASE COUNT          399 a          914 c          914 g          422 t
ORIGIN      
        1 gctacctcgg cgaacggggc gttccctgcg gtgagccagc tcgtgagcga cccggccgac
       61 cccgatcacc tggtcctgcg gtccacgttc ggactgctcg tcacgcgcga tcgcgggcag
      121 acctgggatt ggctctgcga agcggggctc ggctacaagg acgtgcagcc gccgatggcg
      181 gtgctggccg gcggcgtgat tttgctgggg gtgccgaacg ggatttcgcg cggcggcacg
      241 agcggatgcg acttcgcgct cgccacggga cccgacgcgg cggtgttcga tctggcacgc
      301 gtgccggccg aggccgacgg cgccgtcgcc gtgagcctct cgggtaccac tgcccaactc
      361 tggcgcactc acgacgccgg cctgtccttc atcgccctcg gcgatcccat cagcggcttc
      421 attcccgcca ccgtcgatgt cgcgccctcg gacgcgaacg tcatctacct gagcggcttg
      481 ctcggcacgc aaggttcgct cctgcgctcg agcgacggcg gcatttccta cgctacgttt
      541 gcgataccga acacgaccac ggcgcatcgc ccgtacatcg ccgcggtcga tccgaacgac
      601 gccgatgtcg tctacgtgcg actcgacggc gagccgtctg agctcgaagt gacgcgcgac
      661 gggggcaaga cgttcacggc accgctcacg acggaggtgc ccgcgctcgg tctcgcgctg
      721 tcacctgacg gtcaaaccgt catcgcgagc aactcgttcg acgggacctt ccgcgccgac
      781 gcggccacgc tcgcgttcga aaaggtggcg tgccaggggc cgtcgtgcct gagcttcacc
      841 gactcgggtc tctttggctg cggcgatcag cgggtcgacg gcttcgtcgt cggtgagtcc
      901 gccgatcgcg gcaggagctt tcagcgcgtg gtggatctca cgtgcattcg cggtcccgcg
      961 gcgtgcggct ccgacacgag cgttgggcaa ttttgcccgg aggcgtggcc gccgattcaa
     1021 gctcagctcg gtgcgacgga gtgctcgcca cccgacgtca ggccctacac gggatgcttc
     1081 gacgggatcg caggcgactc cggctccgaa ccggcgggag gctcgacggc gagcggcggc
     1141 acgacgggct cgccggggca gagcgccggc accggagcgg ccgataccgg gggtcagcgt
     1201 gccgggggtg gtgggggttg ccaggtcgca caggggcgtg cgtcgggctc gagcgcgtgg
     1261 ctcctcgccg gcgcgctcgg ttggttcggt ttgcgccgac ggcgcgtgca ggcatggagc
     1321 ccgtgacctt gcgccgggcg tcgcgggtcg ttcttcgccg tgcggcttgg ctcctcttgc
     1381 taccggcgac ggcgtgtagc tcgcccgcca agccgtccac ggggacgtgc gtcgaaggcc
     1441 tgcgcaccga ctgcagccca ctttacgatc cgccgactta ctcgaccatc ttcgaaaaga
     1501 tcctgcaccc gacgtgcgcc cagggcatgg gcacgtgtca caccgccgac gcggccatgg
     1561 gcggcctcgt gttcgaggac gaggacgacg cgtacgcgcg cctgctcggc gacgcaggtg
     1621 gaaaggcgcg cgtggctcca ggcgatccgg cgtgtagctt gctcgtcgag cgactcgagg
     1681 gcaaaacctc ggacgtgcgc atgccgccgg gacccacgcc gctctccgag gccgcacgct
     1741 gcgacatcgt gcagtggatc agtcagggtg ccgcgcgatg aagaagtggc gccacgctct
     1801 tgggcagcgc gtcggaagca tcgcggcgac cggcgtgctc gcggcgtgca ccgaagccgt
     1861 gccgccgacc ccggcagcaa cgacgtacct cgatcgcgac acgctgatgg atcccgagac
     1921 gtgctcgacg tgccatccga atcaatacgc cgagtgggcg ggcagcatgc acgcctacgc
     1981 atccgacgat ccgctttttt tggcgatgaa cgcgcgtggc cagcgcgagg ccggcatcgg
     2041 taagttctgc gtcaactgcc acgcgccgct ggcggtgcgc acgggcgcga cggaggacgg
     2101 cttgaacctc gccgggctcc cgcaaaagct caaaggcgtc acctgctttt attgtcacag
     2161 cgtgacggag gtcacgggga cgcacgacaa tccgctcgtg ctcgccgccg acgacacgat
     2221 gcgcggcgaa tacaccgatc cggtgccgaa cagcgcgcac cgctcgacgg gttctcacct
     2281 tcacgatcgc gatctccgcg actcggcgac gctctgcgga gcatgccacg acatcgtgaa
     2341 ccagcacggc acggagctcg agcgcacttt cgccgaatgg caagcgtccg tgttttccga
     2401 gccgagcgtc ggcacgacgt gcggccaatg ccacatggat cagagcacga acctcgagcc
     2461 cgccgcggac gctccgggcg tcttcgctcg ccgcacccac gatcacctgt tccccgccgt
     2521 ggacgtgccg ttcacgggtg acacgacgga gctcgagcgg cgcgtccaaa gcttcctcga
     2581 cacggcgcta cagagcgcca tttgcgtgcg cggggcgggc gcgctcaccg acttgcgcgt
     2641 agttttgga
//
LOCUS       DATIML010000322         1948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2375276, whole genome shotgun sequence.
ACCESSION   DATIML010000322 DATIML010000000
VERSION     DATIML010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2375276"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VLJ38_05570"
     CDS             <1..658
                     /locus_tag="VLJ38_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU39012.1"
                     /translation="SLLERGDVPSWVRARMRRFKLGFGTFKLDFALSAPVPWAVEAAR
                     QSAVVHAGESIDDLTRFVREVRGGTLPERPYLVVGQHTLVDASRAPAGMHTLYVYSRV
                     PPYLHGGWTEAAARFADRVEERIEGLAPGFRKTILARHVLAPPELEAMDANLVGGDLG
                     GGSNAWNRQLVFRPVFPYFRYRTPVRGLYLCSSYAHPGAGVHGMCGYNAATIAARDAR
                     "
     gene            complement(667..1845)
                     /locus_tag="VLJ38_05575"
     CDS             complement(667..1845)
                     /locus_tag="VLJ38_05575"
                     /inference="COORDINATES: protein motif:HMM:NF024918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family protein"
                     /protein_id="HSU39013.1"
                     /translation="MVRWSRGKARVLRVLYGVVGEGMGHATRSRVVVEHLARGGHEIR
                     IVVSGRAHTFMVQKLAAYPNVTVEEIHGLTLQYFGNALDRTQSIFANLKNAPKGIKRN
                     VEVYRRVAESGFRPDVVISDFESWAALYGTRYGVPVISIDNMQIINRCRHDKGLVRAK
                     GFDFEVARLAVKMKVPKAYHYLVTSFFFPAVRKKYTTLIPPILRPEVAGLEWQPASHV
                     LVYQTQTTNQALVPALKQLPHRFRVYGLGREGSDGNVTLCPFSEQKFLDDLATARAVV
                     CGGGFSLLAEAVCLGIPTLSIPVGGQYEQELNARYLDALGYGAWAPRFDGRAIAAFLE
                     RVPEYGAVLGGSRLPRDNAMLFGCVDELLARVARGEKRPSVLDSPAMGKWAADDDAED
                     "
BASE COUNT          309 a          682 c          644 g          313 t
ORIGIN      
        1 gtcgctgctc gagcgcggcg acgtgccgag ctgggttcgc gcgcgcatgc gccgtttcaa
       61 gctcgggttc ggcacgttca agctcgattt cgcgctgtcg gcgccggtgc cctgggccgt
      121 cgaggccgcg cgccagagcg ccgtcgtgca cgcgggggag agcatcgacg acctgacacg
      181 cttcgtccgc gaagtcaggg gcggtacgct gcccgaacga ccctatctcg tcgtcggcca
      241 gcacacgctg gtcgacgcgt cgcgcgcgcc ggcaggcatg cacacgctgt acgtgtactc
      301 gcgcgtgccg ccctacttgc acggcggttg gacggaggcg gccgcgcgtt tcgccgatcg
      361 cgtcgaggaa cgcatcgagg gtctcgcgcc gggctttcga aagaccattc tcgcgcgcca
      421 cgtgctcgca ccgcccgagc tcgaagcgat ggacgcgaat ctcgtcggcg gcgatctcgg
      481 cggcggctcg aacgcctgga accgccaact cgtgttccgc ccggtgtttc cgtactttcg
      541 ctatcgcacg cccgtgcgtg ggctctactt gtgctcgagc tacgcgcacc ccggagcggg
      601 cgtgcacggc atgtgcggct acaacgccgc gactatcgcg gcacgcgacg cgcgttgagc
      661 ttcgcttcaa tcctccgcgt cgtcgtccgc tgcccacttg cccatggccg gactgtcgag
      721 cacgctcggg cgcttctcgc cgcgcgcgac gcgggccaag agctcgtcga cgcacccaaa
      781 cagcatcgcg ttgtcgcgcg gcaggcggct gccgccgagc acggcgccgt actccgggac
      841 gcgctcgagg aacgccgcga tcgcgcgccc gtcgaaacgc ggcgcccacg cgccgtaccc
      901 gagcgcgtcg aggtaacgcg cgttcagctc ctgctcgtat tggccaccca ccgggatcga
      961 gagcgtgggg ataccgagac agacggcttc ggcaagcagc gagaagccgc cgccgcacac
     1021 gacggcacgc gccgtcgcga gatcgtccaa gaacttctgc tccgaaaacg gacagagcgt
     1081 cacgttgccg tcgctgccct cgcgcccgag accgtacacc cgaaatcggt gcggcagctg
     1141 cttcagggcc gggacgagcg cctgattcgt cgtttgcgtc tgatacacga gcacgtgcga
     1201 cgcgggctgc cactcgaggc cggcgacctc gggccgcaga atcggcggga tcagcgtcgt
     1261 gtacttcttg cgaacggccg gaaagaagaa gctcgtcacc agatagtgat acgccttcgg
     1321 caccttcatc ttcacggcga gacgcgcgac ctcgaagtcg aagcccttgg cgcgcacgag
     1381 gcccttgtcg tgacggcagc ggttgatgat ctgcatgttg tcgatgctga tcaccggcac
     1441 gccgtagcgc gtgccgtaga gcgccgccca tgactcgaag tcgctgatca cgacatcggg
     1501 acggaagccg gactccgcga cgcgacgata aacctcgacg ttgcgcttga tacctttggg
     1561 cgcgttcttg aggttcgcga agatgctctg ggtgcgatcg agcgcattgc cgaagtactg
     1621 cagcgtgagg ccgtggatct cctcgaccgt gacgttcggg taggccgcga gtttttgcac
     1681 catgaaggtg tgggcgcggc cggagaccac gatgcggatc tcgtgcccgc cgcgcgccag
     1741 gtgctcgacc accacgcgac tccgcgtcgc atgccccatc ccttcgccga cgactccata
     1801 aagtacgcgc aaaacccggg cctttccgcg cgaccatcgc accatccgca ggggagcgga
     1861 agagtgaccg ctcgcgacgg ggctgctacg ctcgcgccat gtcgccggcc gccccgccgc
     1921 ccgagctcga cggccgtcag cgccgcca
//
LOCUS       DATIML010000323         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2087180, whole genome shotgun sequence.
ACCESSION   DATIML010000323 DATIML010000000
VERSION     DATIML010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2087180"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VLJ38_05580"
     CDS             <1..784
                     /locus_tag="VLJ38_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /protein_id="HSU39014.1"
                     /translation="DAHMAYVGKSAFAHKGGIHVAAMRRNTESYQHVDPALVGNEMRV
                     VVSELSGRGNVLSKAEELGVRVAAGVEGEALEEIKKAEARGVSYEGAEASIALLLARR
                     APDYEPLFVVQDYETRVGRRGGGETYAEATVKLRVGAQSFHTAAEGNGPVSALDAALR
                     KALTPVYPALAAIHLADYKVRILDGKDGTEATTRVLIDSLYEQQSYSTVGASPNIILA
                     SLEALVDAIEYGLRQHGVRLADALFDQTARPSERNVARASSA"
     gene            complement(813..>1541)
                     /locus_tag="VLJ38_05585"
     CDS             complement(813..>1541)
                     /locus_tag="VLJ38_05585"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU39015.1"
                     /translation="IGTTLQIVGESLCEAVDLESGSRVLDVACGNGNAALAAARRFCR
                     VTGLDYVPELLRRAEERARAERLELETVEGDAERLPFEDGSFDTVLSTFGVMFAPDQE
                     RAANELLRVTKPGGKIGLANWTPEGFIGGLLKTVAKHVPPAAGLASPILWGTQARLED
                     LFRGARSVRATRKDFVFRYESSAHFIDVFRRLYGPTYVAFRMLDAAGQARLTADIGEL
                     ASRFTRRQTSFVVPGEYLEVVIER"
BASE COUNT          263 a          544 c          532 g          202 t
ORIGIN      
        1 cgacgcgcac atggcatacg tgggcaagag cgcgttcgcg cacaagggcg gcatccacgt
       61 cgccgccatg cgccggaaca ccgagtcgta ccagcacgtc gaccccgcgc tcgtcggcaa
      121 cgagatgcgc gtcgtcgtga gcgagctctc gggccgcggc aacgtgctct cgaaggccga
      181 agagctcggc gtgcgcgtgg cggccggcgt cgaaggcgaa gcgctcgagg agatcaaaaa
      241 ggccgaggcg cgcggcgttt cgtacgaggg cgccgaggcg tcgatcgcgc tcttgctggc
      301 gcgccgagcg cccgattacg agccgctctt cgtcgtccag gattacgaga cgcgcgtcgg
      361 ccggcgtggc ggcggggaaa cgtacgccga ggcaacggtg aagctccgcg tcggcgcgca
      421 gtcgttccac acggccgcgg agggcaacgg cccggtgagc gcgctcgacg cggcattgcg
      481 caaagcactc acgcccgtgt atccggcgct cgccgccatt cacttggccg attacaaagt
      541 gcgtatcctc gacggcaaag acggcaccga agcgaccacg cgcgtgctca tcgacagcct
      601 gtacgagcag cagtcgtaca gcacggtcgg cgcgtcaccg aacatcatcc tcgcgtcgct
      661 cgaagcgctg gtcgacgcca tcgagtacgg cttgcgccaa cacggggtgc gtctcgctga
      721 cgcgctcttc gaccaaacgg cgcgcccgag cgaacgcaac gtggcgcgcg cgagcagcgc
      781 ctaaccgctc gcacgcgcac gcaggcgccg cctcagcgct cgatcacgac ctcgaggtac
      841 tcgccgggta ccacgaacga cgtctgccgg cgcgtgaagc gcgacgcgag ctcgccgatg
      901 tcggccgtga gacgcgcttg gccggcggcg tcgagcatgc ggaacgcgac gtacgtcggc
      961 ccgtaaagac ggcggaacac gtcgatgaaa tgcgcgctcg actcgtagcg gaacacgaag
     1021 tccttgcgtg tggcccgcac ggagcgcgcg ccgcgaaaca ggtcctcgag ccgcgcctgc
     1081 gtgccccaga ggatcggcga agccagaccg gccgccggcg ggacgtgctt ggcgaccgtc
     1141 ttcaacaggc cgccgatgaa gccctcgggc gtccagttgg cgaggccgat cttgccgccc
     1201 ggcttggtca cgcgcaggag ctcattggcc gcgcgctcct ggtcgggcgc gaacatgacg
     1261 ccgaacgtcg aaagcaccgt gtcgaagctg ccgtcctcga acggcagccg ttcggcgtcg
     1321 ccctcgacgg tttcgagctc gagccgctcg gcgcgggcgc gctcctccgc gcggcgcaag
     1381 agctccggca cgtaatcgag cccggtcacg cggcaaaagc ggcgcgccgc cgcgagcgcg
     1441 gcgttgccgt tcccgcacgc gacgtcgagg acacgcgagc cggactcgag atccaccgct
     1501 tcgcacagcg actcccccac gatctgcagc gtcgtgccga t
//
LOCUS       DATIML010000324         3458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2087188, whole genome shotgun sequence.
ACCESSION   DATIML010000324 DATIML010000000
VERSION     DATIML010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3458
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2087188"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1660
                     /gene="glgB"
                     /locus_tag="VLJ38_05590"
     CDS             <1..1660
                     /gene="glgB"
                     /locus_tag="VLJ38_05590"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: protein motif:HMM:NF003811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HSU39016.1"
                     /translation="LFVPGVGAGALYKYEIRTREGELRLKCDPLGREMELPPATATRV
                     TESSYQWFDEAWMRARAGKDQTREPVSIYELHVGSWARIPEEDNRWLTYRELAPRLVA
                     HVKALGFTHIELMPVAEHAFYPSWGYQVTGYFAPTGRYGTPDDFRFFVDYCHQQGIGV
                     IVDWVPAHFPKDDFSLRRFDGTPLYEHEDPRRGEHPDWGTLIFNYGRTEVRNFLVANA
                     LYWIHEFHIDGLRVDAVASMLYLDYSRREGEWMPNPYGGRENVEAIDFLRAFNAAVHE
                     EAPGAFTIAEESTAWGGVSKPPSEGGLGFTFKWNMGWMHDTLNFFSKEAVHRKFHVDQ
                     LTFSMLYEYTERFINSISHDEVVHGKGALVEKMPGDFWQKLANLRLLFAYQYTRPGKQ
                     LMFMGTEFAQHHEWNVDASIDWHIADHPQRRELQLFIAELSRYYMQTPALWRSDPDTF
                     GFEWIDCSDRDNSVLSYMRRDVDKFVVVVLNFTPVPREGYRIGVPRSGRYLERISTDD
                     QRFGGSDFRTFAVVDADPVPTHGREWSLSLNLPPLGALVLEPAG"
     gene            1840..3036
                     /locus_tag="VLJ38_05595"
     CDS             1840..3036
                     /locus_tag="VLJ38_05595"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSU39017.1"
                     /translation="MINNRAAVVFRGMNRRLARSAVKRVTLGAIALALGCSAPRAAPS
                     EELYQGTAELDERTLGFEVGGRITALAVDEGARVKAGALLATLDLGVDEQARQARELE
                     ARAALAEATVVDKGVRPEEIAVTKAKLRAARASEELAGKQLARERELNARGVTPEARL
                     DELDAEYARRVAERESLESELRQQQRGARPEERAAARAKAEAAQANVTLDDLRIEKRE
                     LRAPRDGVVLDRHVRTGEVVLAGAPVFTLADPGRLYAYVFVPQGKLSGIDVGDRADVR
                     ADGVARALAAHVENVARRTEFTPRYLFSENERENLVVRVKVRIDDPDELLHAGVPVRV
                     SIERNTPAAARTFDPVASAAPAPAPSAAVTAPSAVASSKGKPAPGSAASPPSPPGAVA
                     GGKPSP"
     gene            3033..>3458
                     /locus_tag="VLJ38_05600"
     CDS             3033..>3458
                     /locus_tag="VLJ38_05600"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU39018.1"
                     /translation="MSDKVIVTRGLSRRFGELVAVRDVSLEVERGEIFGVLGPNGAGK
                     STTIRMLCGILDPSSGEGTVVGFDIRRDAERVKQRIGYMTQRFSLYEDLTVEENLKFY
                     AGIYGVPLGKRRRRVGEVLERTGLVARRAQIAGTLSGGWK"
BASE COUNT          559 a         1162 c         1175 g          562 t
ORIGIN      
        1 gctgttcgtc ccgggcgtcg gcgcgggggc gctctacaaa tacgaaatcc gcacgcgcga
       61 gggcgagctg cgcctcaaat gcgatccgct cggccgcgag atggagctgc cgcccgccac
      121 ggcgacgcgc gtcaccgagt cgagctacca gtggttcgac gaagcttgga tgcgcgcgcg
      181 cgcgggcaag gatcagacgc gggagcccgt ctcgatctac gagctgcacg tcggctcgtg
      241 ggcgcgtatc cccgaagagg acaatcgctg gctcacctat cgcgagctcg cgccgcgcct
      301 cgtcgcccac gtcaaagctc tcggcttcac gcacatcgag ctcatgcccg tggccgagca
      361 cgccttttac ccctcgtggg gttatcaagt gaccggctac ttcgcgccga ctggccgcta
      421 cggcacgccc gacgacttcc gcttcttcgt cgactactgc catcaacaag gcatcggcgt
      481 gatcgtcgat tgggtgccgg cccacttccc caaggacgat ttctcgctgc gtcgcttcga
      541 cggcacgccg ctctacgagc acgaagaccc gcgccgcggt gagcacccgg attggggcac
      601 gctcatcttc aactacggcc gcacggaagt ccgcaatttc ctggtcgcga acgcgctcta
      661 ctggattcac gagtttcaca tcgacgggct gcgtgtcgac gccgtcgcgt cgatgctcta
      721 cctcgactac agccgtcgcg agggcgagtg gatgccgaat ccgtacggcg gccgtgagaa
      781 cgtcgaagcc atcgattttt tgcgcgcgtt caacgccgcc gtgcacgagg aggcgcccgg
      841 cgcgttcacg atcgcggagg aatcgacggc gtggggcggc gtgtcgaaac cgccttcgga
      901 aggcgggctc ggcttcacgt tcaagtggaa catgggctgg atgcacgaca ccttgaactt
      961 cttctcgaag gaggcggtgc accgcaagtt tcacgtcgat cagctcacgt tctcgatgct
     1021 ctacgagtac acggagcgct tcatcaactc gatttcacac gacgaggtcg tgcacggcaa
     1081 aggtgcgctc gtcgagaaga tgcccggcga tttctggcaa aagctcgcga atctgcggct
     1141 gctcttcgcc taccagtaca cgcgccccgg caagcagctc atgttcatgg gcactgagtt
     1201 cgcacagcac cacgagtgga acgtcgatgc gagcatcgat tggcacatcg ccgatcaccc
     1261 gcagcggcgg gagctccagc tcttcatcgc cgagctctcg cgctactaca tgcagacgcc
     1321 ggcgctctgg cgctccgatc ccgacacgtt cggcttcgag tggatcgact gctccgaccg
     1381 ggacaacagc gtgctttcgt acatgcgccg cgacgtcgac aagttcgtcg tcgtcgtcct
     1441 gaacttcacg cccgtgccgc gcgagggcta tcgcatcggc gtgccgcgca gcggtcgcta
     1501 cctcgagcgc atctcgacgg acgaccagcg cttcggcggc agcgacttcc gcaccttcgc
     1561 cgtcgtcgac gccgaccccg tgccgaccca cggtcgcgag tggtccctct cgctcaacct
     1621 gccgccgctc ggcgcgctcg ttctcgagcc tgcgggctga gctctacgtc acgtgcggcc
     1681 gccgttcggc ggtcctccgc gccaacgttc atcagtcccc ctgcagggac cgcgagcgcg
     1741 ttgctgttcc gcgctgaaac agtaaggaaa accggttctt gagctcgtca ctcatcccgc
     1801 cgcgttgacc agttcctttg gccaattatt attggtcgta tgataaataa ccgcgcggcc
     1861 gtggtgtttc gcgggatgaa ccgacggctc gcgcggagcg cggtgaaacg ggtgacgctc
     1921 ggagcgatcg cgctggcgct cgggtgtagt gcgccgcgag cggcgccgag cgaggagctc
     1981 tatcagggca ccgcggagct cgatgagcgg accctcggct tcgaggtcgg cgggcgcatc
     2041 acggcgctcg cggtcgacga gggcgcgcgc gtgaaggccg gcgcgctgct cgcgacgctc
     2101 gatctcgggg tcgacgagca ggcgcggcag gcgcgggagc tcgaagcgcg ggctgcgctc
     2161 gccgaggcga ccgtggtcga taagggcgtg cgacccgaag agatcgcggt gacgaaggcg
     2221 aagctcagag cagcgcgcgc gtccgaggag ctcgcgggca agcagctcgc aagagagcgc
     2281 gagctcaatg cgcgtggggt gacgccggag gcgaggctcg acgagctcga cgccgagtac
     2341 gcgcgccgcg tcgcggaacg cgagtcgctc gagagcgagc tccggcagca acagcgcggc
     2401 gcccggcccg aagaacgcgc cgctgcgcgc gccaaagcgg aggccgcgca agcgaacgtg
     2461 acgctcgacg atttgcgcat cgagaagcgt gaattacgcg cgccgcgcga tggcgtcgtg
     2521 ctcgatcgac acgtgcggac gggtgaggtg gtgctcgccg gcgcgccggt gttcacgctc
     2581 gcggatccgg ggcggctcta cgcgtacgtg ttcgtgccgc aaggcaagct ttcgggcatc
     2641 gacgtgggcg atcgcgcgga cgtgcgggcg gacggggtcg ctcgcgccct cgccgcgcac
     2701 gtcgagaacg tcgcgcggcg caccgagttc acgccgcgct acctgttcag cgaaaacgag
     2761 cgtgaaaatc tcgtcgtgcg cgtgaaggtg cgcatcgacg atccggacga gctcttgcac
     2821 gcgggcgtgc cggtgcgcgt cagcatcgag cgcaacacgc ccgccgcggc gcgcacgttc
     2881 gaccccgtgg cctcggcagc acccgcgccg gctccgtccg ctgccgtcac ggcaccctcc
     2941 gccgtcgcct cgtcgaaggg taagcctgct ccgggcagcg cggcctcgcc gccgtcgcct
     3001 cccggcgccg tcgcgggcgg aaagccgtct ccgtgagcga caaagtgatc gtgacgcgcg
     3061 gcttgtcgcg ccgcttcggc gagctagtgg ccgtgcgcga cgtgtcgctc gaggtggagc
     3121 gcggcgaaat tttcggcgtg ctcgggccga acggcgccgg caaatcgacg accattcgca
     3181 tgctctgcgg catcctcgac ccgtcgagcg gcgagggcac ggtggtcggc ttcgacattc
     3241 gtcgtgacgc cgagcgcgtg aagcagcgca tcggctacat gacccagcgc ttcagcctgt
     3301 acgaggatct gacggtcgaa gagaacctca agttctacgc cggcatctac ggcgtgccgc
     3361 tcggcaagcg gcgccggcgt gtcggcgaag tgctcgaacg cacgggtctc gtggcgcggc
     3421 gggcgcaaat cgcgggcact ctttcgggcg gctggaag
//
LOCUS       DATIML010000325         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3820216, whole genome shotgun sequence.
ACCESSION   DATIML010000325 DATIML010000000
VERSION     DATIML010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3820216"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..740)
                     /locus_tag="VLJ38_05605"
     CDS             complement(<1..740)
                     /locus_tag="VLJ38_05605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSU39019.1"
                     /translation="MLAIYLATAAAALALVVGVLTTERSHEEDQLREQLLAEANLRGH
                     YLVRYLDLLVQQLRRLGLRSDVSLLDQNFAPERSLVTLSHQKGTFFNLGLAILGVDGQ
                     VLWEGPEHFLPRQNFGDRPWFVNVLKSRSVHVVPVDPERSEDAVLYVVTPIVRGGSVT
                     GALLGAVDLKHGDVLSVGGARANVNTVLVTSGGDIVYPPAPPAFAHEANWRRLFSSDA
                     ALGHVTSTDLSGVRTVVATSPIESTELEL"
     gene            complement(1132..>1874)
                     /locus_tag="VLJ38_05610"
     CDS             complement(1132..>1874)
                     /locus_tag="VLJ38_05610"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HSU39020.1"
                     /translation="YVSSNDSGSVAVIDTAARRLSTTIAVGAQPSGMVATSDGKYVIV
                     AVQGEGEAVIVDTATDAVLARAAVGKAHSATMNPDGSLAFVASQAQAAPGIQGIDVPS
                     GAPSMLFPLDAAPRALADVQGKLYATEVGSADVEVLDATSGDKLAAVTTGGSPHDVRP
                     TRDGAAVLTVSQTAGELDFIDPASSTIVARVATGTLPHWIAPATDGRGVYVTNEGDDN
                     LVVVDVVTHAVTKTLSLGKAPRKIVVQP"
BASE COUNT          311 a          632 c          651 g          280 t
ORIGIN      
        1 agctcgagct ccgtgctctc gatcgggctc gtggcgacca ccgtgcgcac gccggagagg
       61 tccgtcgacg tcacgtggcc gagcgcggcg tccgagctga atagacgccg ccaattcgct
      121 tcgtgcgcga aggccggcgg cgcgggcgga tacacgatgt cccccccgct cgtcacgagc
      181 acggtgttca cgttcgcgcg cgcgccgccc acgctgagca cgtcgccgtg cttcaaatcg
      241 accgcgccga ggagcgcccc cgtgacgctg ccgccgcgca cgatgggcgt gacgacgtag
      301 agcacggcgt cctcggagcg ctcggggtcg acgggcacga cgtgcacgga gcggctcttc
      361 agcacgttga cgaaccaagg ccggtccccg aagttctgtc gcggcaagaa gtgctccggc
      421 ccctcccaga gcacctgccc gtcgacgccg aggatcgcga gtcccaggtt gaaaaacgtg
      481 cccttctggt gggagagcgt cacgaggctc cgctcgggcg cgaaattctg gtccagcaga
      541 ctcacgtccg atcgcaggcc caaccggcga agctgctgca cgagcaggtc gaggtagcgg
      601 acgaggtaat gaccccgcag gttcgcttca gcgagcagct gttcgcgcag ctggtcctct
      661 tcgtgcgagc gctccgtcgt gagcacgccg acgaccaggg caagcgccgc cgccgcggtc
      721 gctagataaa tcgccagcac ggcgcgggcg aaccgagcgt gagcggcggc aagagccgtc
      781 gcggtgccat gcccgtgtga gggcggctct tctggagcaa actgctgcgt cactgactgg
      841 ggctcagtta ctccacgccg cccggggcgg ccagaccacg ccgttcggtg aaagaaaggt
      901 gtagctgggg ccgcaggccc cagcccgaca agacgtgtga gtcttggagg aacagatcac
      961 gatcggcacg aggggctaca gcctaacgcg actaagccgg cgcggccggc gctagggccg
     1021 gcgctcgaag ctcctgacga gccaaccccg aagaacgact ctgagaaatc cagcaacaag
     1081 actcaagcag tccgtgcacg gaacggctcg tcaaggcttc cccgacaggc gttagggctg
     1141 gactacgatt ttacgcggcg ctttcccgag cgaaagcgtc ttcgtcacgg cgtgcgtcac
     1201 cacatcgacg acgacgagat tgtcgtcgcc ttcgttcgtg acgtacacac cgcggccgtc
     1261 cgtggcgggc gcgatccagt gcggcagcgt gccggtcgcc acgcgggcga cgatggtcga
     1321 ggacgcaggg tcgatgaagt cgagctcgcc cgcggtttga ctcacggtga gcaccgccgc
     1381 gccgtcgcgc gtgggacgca cgtcgtgtgg cgagccgccg gtcgtaactg cggcgagctt
     1441 gtcgccgctg gttgcgtcga gcacctcgac gtcggcggag ccgacttcgg tcgcgtagag
     1501 tttgccctgg acgtcggcga gcgcgcgcgg cgcggcgtcg agggggaaca acatgctggg
     1561 cgcccccgag ggcacgtcga tgccttgaat gccgggcgca gcctgagcct gtgacgcgac
     1621 gaacgcgagc gagccgtcgg gattcatcgt ggcgctgtgc gctttgccga cggccgcgcg
     1681 cgcgaggacg gcgtccgtgg ccgtatcgac gatcacggct tcgccctcgc cctgcacggc
     1741 cacgatcacg tacttgccgt cactcgtcgc caccattccc gagggctgcg cgccgaccgc
     1801 aatcgtcgtg ctcaggcgcc gcgcggccgt atcgatgacg gcgacgctgc cggagtcgtt
     1861 gctcgacacg taca
//
LOCUS       DATIML010000326         5123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1800616, whole genome shotgun sequence.
ACCESSION   DATIML010000326 DATIML010000000
VERSION     DATIML010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5123
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1800616"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VLJ38_05615"
     CDS             complement(<1..368)
                     /locus_tag="VLJ38_05615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39021.1"
                     /translation="MGLLFFSTKHLVVAATACAIVYGCGSPDRHFVDLSKGGMGGTGA
                     SGGSSATGGKHASGGTAGKGGSGGGTGAEAGQGGDMGGGSPGATGGTGATGGTGATAG
                     KAGSAGKGGSGGTNGLAGESG"
     gene            complement(453..1610)
                     /locus_tag="VLJ38_05620"
     CDS             complement(453..1610)
                     /locus_tag="VLJ38_05620"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HSU39022.1"
                     /translation="MGSRQATLFVTVAALAGCARRSATNDHAAATGSAPQTANALAAP
                     STRTETTARVPPFRFTDQRGHAVTDAELRGHVWIFDFVYTSCTSVCPTLTAKFVMLER
                     KLADPELRFVSFAVDPAHDTPEALARYAERFRPDERRWLLLATDDARLQRFAHDVGAD
                     VQASSAPNDPIRHSVAFFLVDRDGSLARSYDSTDPSALARLRADAAALAGDRTARPNE
                     TAAELVASLGCNGCHARAELAPPLAGLGGQSVELSDGRRVLRDPAYLRESLLEPSSKL
                     VRGYPDRMPAYGAELSTTELDALVVSLMHLPAASATSDAERPNAARLRAPTSGSASSA
                     AEPEIAIDAVCGMAVHVAPNTPQADLAGRRYFFCSDTCRERFKKTPAEFAR"
     gene            1671..2753
                     /locus_tag="VLJ38_05625"
     CDS             1671..2753
                     /locus_tag="VLJ38_05625"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39023.1"
                     /translation="MQSVCLNMIVKNEARVIKRCFDSVRSLLTHWVIVDTGSTDGTQE
                     LIRRELAGIPGELHERPWKNFGHNRTEALRLAEGTAEYLLIMDADEELELPPAFVWPE
                     LVADQYRLLHRHRASPETAWELGSLVKQSLPWRYEGVLHEVIVCDAPHRALSLDGPVV
                     WGHFDSARNADPRAKYAEDARVLEAALVAEPANARYVFYLAQSYRDCGKLEQAVAVYE
                     RRVALGGWGEEVYFAQCQVGTLGQRLGWDWSRVLTAYLRAYELRRSRAESLWACAAHY
                     RVTEEWGLAELFARAALAIPRPPDILFVDDAVYTWRALDELAIATYYVGKRDESRALN
                     ERLLNEGHLPASERARVVQNLAFSRR"
     gene            2925..4397
                     /locus_tag="VLJ38_05630"
     CDS             2925..4397
                     /locus_tag="VLJ38_05630"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39024.1"
                     /translation="MSLEVGQIIEGKYRIVRLLGEGGMGAVYEGENARISRRVAIKVL
                     HAGFTENREVTQRFEREAQAAGRIGNDHILEVIDLGSFPNGDHFIVMEFLDGEPLSAR
                     IKREKRLLPFQLTPLIRQVLVGLGAAHQAGIVHRDLKPDNIFILKAKAGRADFVKIID
                     FGISKFQPLSGDGMKMTRTGAVMGTPYYMSPEQASGSSDADARSDLYSVGVMMFEAVT
                     GQVPFEAATFNQLMFKIVLSDVPTPESLVPDLDRAFASIVSKAMARDVSSRFQSAPEF
                     VEALDAWLKHGAAVSAPSAAQQQAGRPAIPADARAALAGVATASPVTPAPLARPSGAG
                     VGTAGTWATSQVEQAPPKKSVSRGALIAAGAAVILVIGGAAAFATLGAKKDAPSPNPP
                     AAAAPAPATVTAPAPAAASVRAPLPEIAPSAPAAAPAESQVAPAMTASASAAPATHPA
                     AAPTAPGVAAKPPVRPVQHAAAAKPSKPSKLGNSAPDFGY"
BASE COUNT          814 a         1719 c         1741 g          849 t
ORIGIN      
        1 ccgctttcac ctgcgagccc gttcgtgccg ccggagccgc ctttgccggc cgagccggct
       61 ttgccggcgg ttgcgccggt cccgccggtt gcgccggtcc cgccggttgc gccgggcgag
      121 ccgccaccca tgtcaccgcc ctgtccggct tccgcgccgg taccgccacc tgagccgccc
      181 ttgccggctg ttccgcccga tgcgtgtttg ccgcccgtag cgctcgagcc tccgcttgcg
      241 ccggtgccgc ccatcccgcc cttgctgagg tcgacgaagt gccgatcggg gctgccgcag
      301 ccgtaaacga tcgcgcacgc ggtggcggcc acgacgaggt gcttcgtcga aaagaagagg
      361 agtcccatcg cttctgtcgc ccgccgcgta agacgcaaaa cttatcgaca tcggtaccgg
      421 ccctgtcgct tgccgtcaag acgcacgcga gctcagcgcg cgaactctgc gggggtcttc
      481 ttgaagcgct cgcggcacgt gtccgagcag aaaaagtacc ggcggccggc gaggtccgcc
      541 tgcggcgtat tgggcgcgac gtgtacggcc atcccgcaga ccgcgtcgat cgctatttca
      601 ggctcggcgg cactggacgc cgagccggac gtgggcgctc ggagacgcgc ggcgttcgga
      661 cgttcagcgt ctgaagtcgc actggccgca ggtaggtgca tgagcgacac gacgagcgcg
      721 tcgagctcgg tcgtcgaaag ctcggcgccg tacgcaggca tgcgatcggg atagccacgg
      781 acgagtttgg agcttggctc gaggagagac tcgcgcagat aggctggatc gcgcagcacg
      841 cggcggccgt ccgatagctc gacgctctgt ccgccgagac ctgcaagcgg cggcgcgagc
      901 tccgcgcgcg cgtgacagcc gttgcagccg agcgacgcaa cgagctcggc ggccgtctcg
      961 ttcggtcgcg ccgtgcggtc accggcgagc gccgcagcgt cggcgcgtag gcgagcgagc
     1021 gcgctcgggt cggtgctgtc gtaacttcgg gcgagtgaac cgtcgcgatc gaccaagaag
     1081 aacgcgaccg aatgtcgaat gggatcgttc ggagcgctgc tcgcctgcac gtctgccccg
     1141 acgtcgtgcg cgaagcgctg cagccgtgcg tcgtccgtcg cgagtaggag ccagcgccgt
     1201 tcgtcgggac gaaagcgctc cgcgtagcgt gcgagcgctt ccggcgtgtc gtgcgctggg
     1261 tcgaccgcga acgagacgaa gcggagctcg gggtcggcga gctttcgttc gagcatgacg
     1321 aacttcgccg tcagcgtggg gcagacgctc gtgcaagagg tgtagacgaa gtcgaagatc
     1381 cagacatgtc cgcgcagctc ggcgtcggtc acggcgtggc cacgctgatc ggtgaaacgg
     1441 aacggcggga cgcgtgccgt cgtctccgta cgagtggacg gcgcagcgag cgcgttcgcc
     1501 gtttgcggcg ccgaacccgt agcggcggcg tgatcgttcg tcgcggaacg ccgcgcgcag
     1561 ccggcgagcg ccgcgacggt gacgaacagc gtcgcctggc gcgaacccaa cccaaaaaat
     1621 cgtctagcca cgttctcctg cgccggcccg ccatgctacc tcaggccggc gtgcagagcg
     1681 tgtgtctcaa catgatcgtg aagaacgaag cacgcgtgat caagcgctgc ttcgactctg
     1741 tccggtcgct cctgacgcac tgggtgatcg tcgacacggg ttcgacggac ggcacgcagg
     1801 agctcatccg gcgtgagctc gccggcatcc ccggcgagct ccacgagcgg ccgtggaaaa
     1861 acttcggtca taaccggacc gaggccctgc gcctcgccga aggcacggcc gagtacctcc
     1921 tcatcatgga cgcggacgaa gagctcgagc tgccgcccgc tttcgtgtgg cccgagctcg
     1981 tcgccgatca atatcgcttg ctgcaccggc atcgcgcgtc gcccgagaca gcgtgggaac
     2041 tcgggtcgct cgttaaacag tcgctgccgt ggcgttacga aggcgtgctc cacgaggtga
     2101 tcgtgtgcga tgcgccgcac cgcgcgctct cgctggacgg cccggtcgtg tgggggcact
     2161 tcgacagtgc gcgcaacgcc gacccgcgcg caaagtacgc cgaggacgca cgggttctcg
     2221 aagcagctct cgtcgccgag ccggctaacg cgcgttacgt tttctatctc gcgcagagct
     2281 accgggattg cggcaagctc gagcaagcgg tcgcggtcta cgaacgacgc gtggcgctgg
     2341 gcggctgggg tgaagaggtt tacttcgccc aatgtcaggt gggcacgctg gggcaacgac
     2401 tcgggtggga ttggtcgcgt gtgctcaccg cttatctgcg cgcctacgag ctccgccgtt
     2461 cgcgcgcgga atcactgtgg gcttgcgctg cgcactatcg cgttacggaa gagtggggac
     2521 tcgccgagct cttcgcgcgc gcggccctcg ctattccccg gccccccgac attctgttcg
     2581 ttgacgatgc cgtctacacc tggcgcgcgc tcgacgagct cgccatcgcg acctattacg
     2641 tcggcaagcg cgacgaatcg cgcgcgttga acgagcgcct gctcaacgaa ggccacctgc
     2701 ctgcgtccga acgcgcgcgc gtcgtacaga acctcgcctt ttcgcgccgc tgaactacat
     2761 ccacacacgc ggccgaaccc gaatttcggc gctgcgcggt gctggcggca ggcaagcaca
     2821 gatatttcat gagtttttcg gctcggcagg tggagttcgc gccgctcgcg gcgtatcctt
     2881 gggggaaacc gcgatcccgt ccgctcgggc gcgcagggtc acgtatgtcg ctcgaagtcg
     2941 gtcagatcat cgaaggcaag taccgcatcg ttcgcctgct gggcgagggc ggcatgggcg
     3001 cggtctacga gggcgaaaac gcgcgcatca gccggcgcgt cgccatcaag gtgctgcacg
     3061 ccggtttcac cgaaaaccgc gaggtcaccc aacgcttcga acgcgaggcg caggcggccg
     3121 gccgcatcgg caatgaccac atcctcgagg tgatcgatct cggttcgttc ccgaacggtg
     3181 atcacttcat cgtcatggag ttcctcgatg gtgagccgct ttccgcgcgc atcaaacgcg
     3241 agaagcgcct gctcccgttt cagctcacgc cgctcatccg acaggtgctg gtcgggctcg
     3301 gcgcggccca ccaggccggc atcgttcatc gcgatctcaa gccggacaac atcttcatcc
     3361 tcaaggcgaa ggcggggcgc gccgatttcg tgaagatcat cgacttcggc atctcgaaat
     3421 ttcagccgct cagcggtgac ggcatgaaga tgacgcgcac gggtgcggtc atgggcacgc
     3481 cgtattacat gtcgcccgag caagcgagcg gcagcagcga cgccgacgcg cgcagcgatc
     3541 tgtactccgt gggtgtcatg atgttcgagg ccgtcacggg gcaggttccg ttcgaggcgg
     3601 cgacgttcaa tcagctcatg ttcaagatcg tgctctcgga cgtgccgacg cccgagtcgc
     3661 tcgtgcccga tctcgatcgg gctttcgcga gcatcgtctc gaaagccatg gcgcgcgacg
     3721 tgagctcgcg ctttcagtcg gcacccgagt tcgttgaggc gctcgatgct tggctcaagc
     3781 acggcgcggc ggtctcggcg ccttcggccg ctcagcaaca agcgggccgc cccgcgatcc
     3841 ccgcggacgc ccgcgccgcg ctcgccggtg tcgcgactgc tagcccggtg acgccggccc
     3901 cgctcgcacg accgagtggc gccggggttg gcacggcggg tacttgggcg acctcgcaag
     3961 tcgaacaggc gccgcccaaa aagtcggtca gccgtggcgc gctgattgcg gcgggggccg
     4021 ccgtcatcct cgtcatcggt ggggccgcgg cgtttgcgac gctcggggcc aaaaaggacg
     4081 caccttcgcc gaatccgccg gccgcggcgg cgcctgctcc cgcgaccgtc acggccccgg
     4141 cgccagccgc ggcctcggtg cgggccccgc tgccggagat cgccccttcc gcgccagccg
     4201 ctgcccccgc agagtcccag gttgccccgg ccatgactgc aagcgccagc gccgcgcccg
     4261 cgactcaccc ggcggccgct ccgacagcgc ccggcgtcgc tgccaagccg ccggtcagac
     4321 cagttcagca cgctgcggca gccaaaccgt cgaagccgag caagctgggt aattccgcgc
     4381 ccgacttcgg gtattagcgt gtcaattgcg tggctggggc gcgcgtctct cccgtgtgcg
     4441 attgagctcg ggatgaacga aagcggtact ctcgcaattc tgaccaaccc ctcacaaatt
     4501 cctacattgg actcgtatgt acgtgtggca cttccgcgtc agcctcgatc caaagcggct
     4561 gacgagcgtg aattcggcgg ccgccgaact cgctgagctt ccggaaaatt gcgcgctcgc
     4621 cgcgcgtcgc agcttgccac cttgcagaga agccacgctg ctcgtcggag cgaggtgctc
     4681 cgtcgcacgt tggtcgcggc ctcgcagcgt tcgcgtcaaa aacctgcggc cgcaagagcg
     4741 aagcgcgcat gcgccgagcg atctgcggcg gcgagcgacc agcgctgcaa agcgcggcgc
     4801 gctcgagcgc acggcagaag aacttttcta cgtcagcgtg gcgccgctca cgcgcggccc
     4861 gcgcgagacg agtgtgcttc gaacaaaggc aggcggcgcg gcgcgaattt ttgcgtaagc
     4921 tttgtgcggc gggcggcgac tggtgagtgt gcccatgctt ggttcactga gactccgcgt
     4981 ccgagagcgt gagctctgcg tgaggatgaa gagtcaacgc ttgacggagc gtcgcgaaga
     5041 ggggagtatc gctcggttgc cgggaagcgt tcgctcccgc ttagggttgg tctcgccacg
     5101 agggcgggag ctcttctgga cag
//
LOCUS       DATIML010000327         2502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2954637, whole genome shotgun sequence.
ACCESSION   DATIML010000327 DATIML010000000
VERSION     DATIML010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2954637"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1019
                     /locus_tag="VLJ38_05635"
     CDS             <1..1019
                     /locus_tag="VLJ38_05635"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39025.1"
                     /translation="PPPNSVKPLRLTVIMPVFEDFAAASLVCQAIDGELARVENVEAR
                     VLMLDDGSPSGLRAWSPFTPARLASVEVLRLRRNLGHQRAIAVGLCHLADQSACDAVL
                     VMDADGEDRPVDIPALIAELRRTPEAMIFAERRKRMEGATFQLGYLAYRTLHRVLTGI
                     PVRVGNFSLLPASALPRLVCMSELWNHYAGAALRSRFPQRRLPLDRGSRVLGRSQMGG
                     IIPLVMHGIAGIATYHDLVATRILVASIGLVTLLAAALVSVIGIRVGTSLAIPGWATY
                     AAGTLLVLAIQVLTIAFSLVLSLISGRTGASFVPCNEYRVFVDRVEALGSRDALRAAS
                     SQVC"
     gene            1043..>2502
                     /locus_tag="VLJ38_05640"
     CDS             1043..>2502
                     /locus_tag="VLJ38_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39026.1"
                     /translation="MNDGSSSWRDPRVALVIAVALGMWMPVTRVGWFWGHEQYSYILR
                     TVEWASELNAGVLYPRWCPDFYGGYGSPLFMFYGPTIYAIAGFFTATFTTVLTGLKIV
                     VLLGTLASGLGTYALVLGETRDRDAALLGAMAYLATPYRIGNVYDRGDLGEFSCIAVL
                     PIVLAVYRAASFEPLPRRARLLAVVGCALQALLILTHPVLGLWGSVMVGAVVAASALR
                     LALGGALRRAVELVAMVPAAPCLAGLYILPALIDRRATHTAAMVVNFYNPQNHWMTLG
                     TLFEPSIPLFARNFLMIGPVVAVAGLGVIVGVVCERTSRWRALGWFSLCAALIGLNLP
                     QMSWFWAAGRLPFVEFIQFPWRLLGPAALAAAVALGVGVAAACRRLAPPTRGTIAVFL
                     SAGLLLGVAWPYLSITEMPLAPVPRDSNSVRQSMTSATDANEYLPSTAPNPPAVPARA
                     LVEKARGADVPYAHQDGSRQALVVNAKHKNAQVTLA"
BASE COUNT          329 a          873 c          828 g          472 t
ORIGIN      
        1 gtccgccacc caacagcgtg aagccactcc ggcttaccgt gatcatgccg gtattcgagg
       61 atttcgccgc ggcgagcctc gtctgccagg ccatcgacgg cgagctcgcc cgcgtcgaga
      121 acgtcgaagc gcgcgtgctg atgctggacg acggcagccc gtcggggttg cgcgcctggt
      181 cgccgttcac gcccgcgcgc ctggcgagcg tcgaggtgct ccgcctgcgc cggaacctcg
      241 ggcaccagcg cgccatcgcg gtcggcctgt gtcacctcgc cgatcagagc gcttgcgacg
      301 cggtgctcgt catggacgcc gacggcgaag atcgacccgt cgacatcccg gcgctcatcg
      361 ccgagctccg gcgcactccc gaggcgatga tcttcgccga gcgtcgcaag cgcatggaag
      421 gcgcgacctt ccagctcggc tacctcgcct atcgcacgct ccaccgcgtg ctcaccggca
      481 ttcccgtgcg cgtcggtaac ttcagcctgc tccccgcgag cgcgctgccg cgcctcgtgt
      541 gcatgtcgga gctctggaac cactacgcgg gcgcggcgct ccgctcgcgt ttcccgcagc
      601 gacgactgcc gctcgaccgc ggctcgcgcg tgctcggccg ctcgcaaatg ggcggcatca
      661 tcccgctcgt catgcacggc atcgccggca tcgcgaccta tcacgacctc gtcgcgacgc
      721 gcatcctcgt cgccagcatc ggactcgtga cgttgctcgc cgcggccctc gtaagcgtga
      781 tcggcattcg cgtgggcacc tcgctcgcga ttccgggctg ggcgacgtat gccgccggca
      841 cgctcctggt cctcgcgatc caggtattga ccatcgcctt cagcctcgtg ctctcgctca
      901 tcagcggccg gacgggcgcg agcttcgttc cgtgcaacga atatcgcgtg ttcgtggacc
      961 gtgtcgaagc gctcggcagc cgagacgcgc tgcgcgcggc gtcgagccag gtgtgctagt
     1021 gagcgccggt cgggagcgcg ggatgaacga cggttcgagt agttggcgcg atccgcgggt
     1081 cgccttggtg atagcggtcg cgttgggcat gtggatgccg gtgacgcgtg tcggatggtt
     1141 ttgggggcac gagcagtact cctacatcct gcgcacggtc gagtgggctt cggagctgaa
     1201 cgcgggtgtg ctctatccgc gctggtgccc cgatttttac ggcggctacg gctcgccgct
     1261 ctttatgttt tacgggccga cgatttacgc catcgccggc tttttcaccg cgacgttcac
     1321 gaccgtcctc acgggcctca aaatcgtcgt gctgctcggc acgctcgcgt ccgggctcgg
     1381 aacctacgcg ctcgtgctcg gtgagactcg cgatcgcgac gcggcgttgc tcggcgccat
     1441 ggcgtacctt gcgactccct accgcatcgg caacgtttac gaccgcgggg atctgggtga
     1501 gttcagctgc attgccgtcc tgcccatcgt actggccgtc taccgcgccg cgagcttcga
     1561 gccgctgccg cggcgcgcgc gtctgctggc cgtcgtgggt tgcgcgctcc aagccctgct
     1621 gatcttgacg cacccggtgc tcggactttg gggcagcgtc atggtcggcg ccgtcgtggc
     1681 agccagcgcg ctccgcctgg cgctgggcgg tgcgctgcga cgtgcagtcg agctcgtcgc
     1741 catggtgccg gccgcgcctt gtctcgcggg cctctacatc ctgccggcgc tgatcgatcg
     1801 cagagcgaca cacaccgcgg cgatggtcgt caatttctac aatccccaaa accattggat
     1861 gacgctcggt acgctgttcg agccgagcat tccgctgttc gcccgaaatt tcctgatgat
     1921 cgggcccgtc gtcgccgttg ccgggctcgg cgtaatcgtc ggggtcgtct gcgagcgaac
     1981 gagccgctgg cgtgcgctcg gctggttttc gctgtgcgcc gcgctgatcg gcctgaatct
     2041 accgcagatg agctggttct gggcagccgg ccgtttgccg ttcgtcgagt tcattcagtt
     2101 tccgtggcgg ttgctcgggc cagcggcgct cgcagccgcg gtggcgctcg gcgtcggagt
     2161 ggctgctgcg tgccggcgct tggcgccgcc gacgcgtggg accatcgccg tgttcctgtc
     2221 agcggggctc ttgctgggcg tcgcatggcc atacctctcg atcacggaaa tgccgctcgc
     2281 gcccgtgcca cgtgattcga attccgtacg ccagagtatg acctcggcga cggatgcaaa
     2341 cgagtacctg ccgtcgacgg cgccaaaccc tcccgccgtc ccagcgcgcg cgctggtcga
     2401 gaaggcgcgc ggcgccgacg tgccgtacgc gcaccaggac ggcagccgcc aagccctcgt
     2461 cgtcaacgct aagcacaaga acgctcaagt gacgctcgcg at
//
LOCUS       DATIML010000328         5072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3532482, whole genome shotgun sequence.
ACCESSION   DATIML010000328 DATIML010000000
VERSION     DATIML010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5072
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3532482"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VLJ38_05645"
     CDS             <1..816
                     /locus_tag="VLJ38_05645"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU39027.1"
                     /translation="ESLADAERAATLERTRLEQKALSGMDYDRLLLDLANLRADFARD
                     QAEYAAARADCAAALAAECDLTGTSEDDLTGASADAARAEERLEARPDVRALGLEASA
                     SERDARLAANRAIPDVTLRVGYVYDRFIAAGDIGHTLGVSLALPLPVFDHGQHDATRA
                     KEHALEVSAEKDSMLEEARADVRGLLSRKAALEKNIDILERDTLPRSSGVLSSAERAF
                     HEGGVSLTDFLLSRRTHIALSLTRLDQRFELFQIENELNRVLGLNPTAPQGKP"
     gene            813..2000
                     /locus_tag="VLJ38_05650"
     CDS             813..2000
                     /locus_tag="VLJ38_05650"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU39028.1"
                     /translation="MTIPASSRSVSLTRADRRQRLPGLLAASVVSVAAVVGALMFHRR
                     VPEEPAPPAGMHVDKNGITLETGAPQWKAIKLGKVAPPGERWTEAFPARFRVDEAVAS
                     RVGSPLAGRVTTVSVELGQSVKAGAPLFAVASPDIAALRAEQQKAAVDLQVARAAYER
                     VKAMVDARALPAKDELESDQQAKQAELALKLAQMKLSSLKVSTRGENEFTVVAPRDGV
                     IIEKNVLPGQQVTTDDSLVSVAELDMVWVMADLFEADANGVVTGSKARVTSPSLPGFS
                     IDAPVERVSSVVDPERHTVSVRVKLQNPDLRMRPNMFAEVRFLTEPTAGTVEMAASAV
                     VSDGPKQYAYVLETPGHFVKRSIVAGSERDGRVTVLSGLKAGETVVEQGAVLLDNQID
                     LST"
     gene            2336..>5072
                     /locus_tag="VLJ38_05655"
     CDS             2336..>5072
                     /locus_tag="VLJ38_05655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HSU39029.1"
                     /translation="MLEKLLQFSLANRLFAFVLATVLGAFGYYAFKNLTIEAFPDPTD
                     TQVQVITIFPGQPTEEVERRVSLPLERALNGTPGLSRLRSISLFGLSFVTLTFEDGVD
                     PLAVRQQTVERMADAELPDGVHPSLGPMATPIGEVYRYTLKGKGADPMQLRTLQEWVV
                     RPRLLQAPGVADVVSYGGLVREVHVTPEPTRMAALGVGLGDISSALQKASANATGGYV
                     ERGAEMFVIRSLGIFNGLDDVKRVRVGFHDGVPVTVKDVAQVNDGYQPRQGIVTRGPD
                     EDAVEGIVLMRRGQNPSVVLGGLRDKIQELNTRILPGGITVSPFYDRTDLVHTTLETV
                     FHNLLEGALLVVLVLFAFMLSIRASLIVAAAIPLSLAASFAYLYARGMSANLLSMGAV
                     DFGIIVDGAVILVEHLFHKLSHREDNDTRSLAEAVFQTAKEVARPTLFSLLIIIAAYL
                     PIFSLQRVEGRIFSPLANTVVSALIGALLMTFTLVPVLCYFALKKPKPLRESPLLVWA
                     QRAFDPSLRFAMNNVAAVLIAGAGALVATGILLPRLGSEFLPALNEGALYVTFTLPGN
                     MSLSEGRKLTPKLKSLLERTPEVTEVLSQLGRPEDGTDPTLPSNLEIFVKLKPLDKWR
                     PSVPDLDALVVEMAKNLSEVPGIDYNFSQPIRDNVAENISGQFGQIALKIYGEDLEEL
                     QNAAEKADLTLSKIPGAADVGVVKAGETPQLAVHIDRAALARFDLDLGDVQDYVETAM
                     GGHVASEIWEGERRFDVTVRLPPSTRKDLGAISRIMLPLKNGSLIPLSAVADVSMGTG
                     RAAITRENGRRYVGVRMNVRNRDLGSFVAEAQQRVGDEVKLPAGYQMVWGGEFENQQR
                     AMQRLKLVIPLALLITFLLLFSAFGSVFDAALILVNVPFALIGGVVALAFAGMPLS"
BASE COUNT          815 a         1716 c         1674 g          867 t
ORIGIN      
        1 gaatcgctcg ccgacgcgga gcgcgccgcc acgctcgagc gcacgcggct cgagcaaaag
       61 gcgctgagcg gcatggacta cgaccggttg ctcttggatc tcgccaattt gcgcgccgat
      121 ttcgcccgtg atcaggcgga atacgccgcg gcccgagccg actgcgccgc cgccctcgcc
      181 gccgagtgcg acctcacggg cacgagcgaa gacgatctca ccggagcctc cgccgacgcc
      241 gcgcgtgccg aagagcgact cgaagctcgc cccgacgtgc gcgcgctcgg gctcgaggcg
      301 tccgcctcgg agcgcgacgc ccggctcgcc gcgaaccgcg cgattcccga cgtgacgctg
      361 cgcgtcggtt acgtctacga ccgcttcatc gccgcgggcg acatcggcca cacgctcggc
      421 gtgagcttgg cgctaccgct gccggtcttc gaccacggcc agcacgacgc gacgcgcgcc
      481 aaggagcacg cgctcgaagt ctccgccgag aaagattcga tgctcgaaga agcacgcgcc
      541 gacgtgcgcg gactcttgag ccgcaaagcc gcgctcgaaa agaacatcga cattctcgaa
      601 cgcgacacgc tgccgcgctc gagcggcgtg ctgagctccg cggaacgcgc ctttcacgag
      661 ggcggcgtga gtctcacgga tttcttgctc tcgcgacgca cccacatcgc cctctcgctc
      721 acgcggctcg atcagcgctt cgagcttttc cagatcgaga acgagctcaa tcgtgtgctc
      781 ggtctgaacc ccacggctcc tcaaggcaaa ccatgaccat tcccgcctcg tctcgctccg
      841 tttcgctgac acgcgccgac cggcgacagc gcttgcccgg tctgctcgcc gcgtccgtcg
      901 tcagcgtcgc ggccgtggtg ggagctttga tgttccaccg tcgcgtgccc gaagaaccgg
      961 cgccgccggc cggcatgcac gtcgacaaga acggcatcac gctcgaaacc ggcgcgcccc
     1021 agtggaaagc catcaagctc ggcaaggtgg cgccgcccgg cgagcgctgg accgaggcgt
     1081 ttccggcgcg cttccgcgtc gatgaagcgg tcgcttcgcg tgtcggctcg ccgctcgcgg
     1141 gccgcgtcac gaccgtgtcg gtcgagctcg ggcagagcgt gaaggcgggc gcgccgctct
     1201 tcgccgtggc gagcccggac atcgccgcgc tgcgagccga gcagcagaag gcggcggtcg
     1261 atctgcaggt cgcgcgcgcc gcgtacgagc gcgtgaaggc gatggtcgac gcgcgcgccc
     1321 tgccggccaa ggacgagctc gagagcgatc agcaagcgaa gcaggcggag cttgcgctca
     1381 agctcgcgca gatgaagctc tcgtcactca aggtttcgac gcgcggcgaa aacgagttca
     1441 ccgtcgtcgc gccgcgtgac ggcgtcatca tcgagaagaa cgtgctgccc gggcagcagg
     1501 tgacgacgga cgacagcctg gtgagcgtcg ccgagctcga catggtctgg gtgatggcgg
     1561 acttgttcga ggcggacgcg aacggcgtcg tcaccggcag caaggcgcgc gtgacgagcc
     1621 cgtctctgcc cggcttctcc atcgacgcgc ccgtcgagcg cgtttcgtcc gtcgtggatc
     1681 ccgagcggca cacggtgtcg gtgcgcgtga agcttcaaaa tccggatctg cgcatgcggc
     1741 cgaacatgtt cgccgaggtg cgttttctca ccgagcccac ggcgggcacg gtcgaaatgg
     1801 cggcgtccgc cgtcgtctcg gacggcccga agcaatacgc gtacgtgctc gagacgcccg
     1861 ggcatttcgt caaacgcagc atcgtcgccg gctccgagcg cgacggccgc gtcacggtgc
     1921 tctctgggct caaagcgggc gagacggtgg tggagcaagg cgcggtgctc ttggataacc
     1981 aaattgattt gtcgacgtga acttgggacg cctggcatga cacgagacgt cttttctgtt
     2041 gaaaggtcct tggctcggat cgagcgcctg cgtgatggcg tcgatcgcgc gctttgggca
     2101 cgccgcgccg ggctcgccgg tttgtcgtgg ggggtgtggc gactcatggc gatcgtgatc
     2161 tggtcttcca agaccgcgaa ctcgttccgt gcggagcttc gctccgcggt ccgctccgca
     2221 aacgccttgc gcgcaacggc tcatgcgtcc cgagcaacga ctcgtgctct tcgcgagacg
     2281 actcgtgcat tggccgtgac acacagcctc aacgcatgcg ggagggcgta gggacatgct
     2341 cgagaagctg ctgcagtttt cgctggcgaa tcggttgttc gcgttcgtgc ttgcgactgt
     2401 cctcggagcg ttcggttact acgccttcaa gaacctcacg atcgaggctt ttcccgatcc
     2461 cacggataca caggttcagg tcatcacgat atttccgggc caacccaccg aggaagtaga
     2521 gcgacgcgtt tcgctgccgc tcgagcgcgc gctgaacggc acgcccggtc tgtcgcgcct
     2581 gcgcagcatc tcgctcttcg ggctctcctt cgtcacgctc acgttcgagg acggcgtcga
     2641 tccgctcgcc gtgcgccagc aaaccgtcga gcgcatggcc gacgccgagc tgcccgacgg
     2701 cgtgcacccc tcgctcggcc cgatggcgac gcccatcggt gaggtgtatc gctacacgct
     2761 caagggcaag ggcgccgacc cgatgcagct gcgcacgctg caggagtggg tcgtgcggcc
     2821 gcggttgttg caagcgccgg gcgtcgcgga cgtggtttct tacggcggcc tcgtgcgcga
     2881 ggtgcacgtg acgcccgagc cgacgcgcat ggccgcgctc ggcgtgggac tcggcgacat
     2941 ttcgagcgcg ctgcaaaagg cgagcgccaa cgcgaccggc ggctacgtcg agcgcggcgc
     3001 cgaaatgttc gtgattcgga gcctcggcat cttcaacggg ctcgacgacg tgaagcgcgt
     3061 gcgcgtcggc ttccatgacg gcgtgcccgt cacggtcaag gacgtggcgc aagtcaacga
     3121 cggctatcag ccgcgccagg gcatcgtcac gcgcggcccg gacgaagacg ccgtggaagg
     3181 catcgtgctg atgcgccgcg gccaaaatcc gtcggtcgtg ctcggcggcc tgcgcgacaa
     3241 gatccaagag ctcaacacgc gcatcctgcc gggcggcatc accgtcagtc ccttctacga
     3301 ccgcacggac ctcgtccata cgacgctcga gacggtgttc cacaacctgc tcgagggcgc
     3361 gctgctcgtc gtgctcgtgc tgttcgcgtt catgctgtcg attcgagcgt cgctcatcgt
     3421 ggcggcggcg ataccactct cgctcgccgc gtcgttcgcg tacctgtacg cccgcggcat
     3481 gtccgcgaac ctgctctcga tgggcgccgt agacttcggc atcatcgtcg acggcgccgt
     3541 catcctcgtc gagcacctgt tccacaagct gtcgcatcgc gaggacaacg acacgcgctc
     3601 gctcgccgaa gccgtgttcc aaaccgccaa ggaagtcgcg cgaccgacgc tgttctcgct
     3661 gctgattatc atcgcggctt atttgccgat tttctcgctg cagcgcgtcg agggccgcat
     3721 cttctcgccg cttgcgaaca ccgtcgtgag cgccctgatc ggcgcgctgc tcatgacgtt
     3781 cacgctcgtg ccggtactct gctacttcgc gctgaagaag ccgaagccgc tccgcgaatc
     3841 gccgctgctc gtctgggctc aacgggcgtt cgatccgtcg ttgcgcttcg cgatgaacaa
     3901 cgtcgcggcc gtcttgatcg ccggcgcggg agcgctggtc gcgacgggca tcctcttgcc
     3961 gcggctcggt tcggagttct tgccggcgct gaacgaaggc gcgctctacg tcaccttcac
     4021 gctgcccggc aacatgtcgc tcagcgaggg ccgcaagctc acgccgaagc tcaagtcgct
     4081 gctcgagcgc acgccggaag tgaccgaggt gctctctcag ctcggccggc ccgaagacgg
     4141 cacggacccg acgttgccct cgaacctcga aatcttcgtg aagctgaagc cgctcgacaa
     4201 gtggcgcccg agcgtgcccg acctcgacgc gctcgtcgtc gagatggcga agaacctgag
     4261 cgaggtgccg ggcatcgact acaacttctc gcagccgatc cgcgacaacg tcgccgaaaa
     4321 catctcgggc cagttcggac aaatcgcgct caagatttac ggcgaggatc tggaagagct
     4381 ccagaacgcg gccgaaaagg ccgatctgac actgtcgaag atcccgggcg cggccgacgt
     4441 cggtgtcgtc aaggcgggcg aaacgccgca acttgccgtg cacatcgatc gcgcggcgct
     4501 ggcgcgcttc gatctcgatc tcggcgacgt gcaggattac gtcgagacgg cgatgggcgg
     4561 gcacgtcgcg agcgaaattt gggagggcga gcggcgcttc gacgtgacgg tgcgtttgcc
     4621 gccgtcgacg cgcaaggatc tcggcgcgat ttcgcgcatc atgctgccgc tcaagaacgg
     4681 ttccttgatt ccgctctcgg ccgtcgcgga cgtgagcatg ggcacgggcc gcgcggcaat
     4741 cacgcgcgag aacggccgcc gctacgtcgg ggtgcgcatg aacgtgcgca accgtgatct
     4801 cggctcattc gtcgcggaag cgcagcagcg cgtcggcgac gaggtgaagc tcccggccgg
     4861 ctatcagatg gtgtggggcg gcgaattcga aaaccagcag cgcgcgatgc agcggctcaa
     4921 gctcgtgatt ccgctcgcgc tgctgatcac gttcctgctc ctgttctcgg cgttcggctc
     4981 cgttttcgac gcagcgctga ttctggtcaa cgtgccgttc gcgctgatcg gcggcgtggt
     5041 cgcgctcgcg ttcgccggca tgccgctctc gg
//
LOCUS       DATIML010000329         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1224207, whole genome shotgun sequence.
ACCESSION   DATIML010000329 DATIML010000000
VERSION     DATIML010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1224207"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..618)
                     /locus_tag="VLJ38_05660"
     CDS             complement(199..618)
                     /locus_tag="VLJ38_05660"
                     /inference="COORDINATES: protein motif:HMM:NF016153.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HSU39030.1"
                     /translation="MTEGPLPTLMACLNTASVVCLSAGYLSIRRRNVELHRRFMLTSF
                     VISALFLVTYLLHHILTGNVVFHGQGIARVVYFVILIPHVLLAVSILPLAIVTIRRGL
                     AGRIDKHRPLARVTLPLWLYVSVTGVVVYMMLYRLGF"
     gene            complement(618..1691)
                     /locus_tag="VLJ38_05665"
     CDS             complement(618..1691)
                     /locus_tag="VLJ38_05665"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HSU39031.1"
                     /translation="MPEAKLVPPPTKGHASIAKVSHAWYVVCESHELGKKPVPVELLG
                     TPLVLFRADGGKPAALLDRCPHRNAPLSLGRVVAGGRLECAYHGWQFEGAGRCALVPG
                     LIGGSEARERRVPACATREQGGFVWVWAELDAEPTHEPFALGDAPAGYARVVRRVEAP
                     GTLHATLENALDVPHTAFLHRGLFRGAGKRNEIRATVRRSADRVEVEYAGEPRPSGAV
                     GYLLSPSGGTVEHWDRFILPSIAQVEYRLGRESHFTVTAFGTPVSDFVTRLFAVVDFR
                     SPIPSWLVRPFLEPVALSIFKQDVRMLGAQSETVRAFGGEQYMSTELDLIGPHIWRLL
                     KQAEAGERAPDETSVEREVRFLA"
     gene            1789..>2087
                     /locus_tag="VLJ38_05670"
     CDS             1789..>2087
                     /locus_tag="VLJ38_05670"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSU39032.1"
                     /translation="MVDRKTASFMRSLCMGQIVEDIVLPFPEIAEADKETLEGVFTTI
                     SQLLGSREADLKKWDRQGELPAEFVNELRAAGLFSFVIPEASGGLGFGSKAYSRAL"
BASE COUNT          354 a          673 c          720 g          340 t
ORIGIN      
        1 agctctgcgt gccgctccgt tcacgcgccg ccccccgccg tccctctccc ccgcccgccg
       61 tctctatccg ttcccgccgt ctctatccgt tcccgtctct atccgttccc gccgtccacg
      121 cgccgttcgc cgcgatccct cccggtcgcg cgctgttcac gcgccgttcc ccgccgtctc
      181 ccggctgggg cgcgtttgct aaaatccgag ccggtacaac atcatgtaca cgacgacgcc
      241 cgtgaccgag acgtagagcc acagcggtaa ggtgacgcgc gcgagcgggc ggtgtttgtc
      301 gatgcggccg gcgaggccgc ggcggatggt gacgatggcg agcgggagga tgctgacggc
      361 gaggaggacg tgcgggatga gaatgacgaa gtagacgacg cgcgcgatgc cttggccgtg
      421 gaagacgacg ttgcccgtca agatgtggtg gaggaggtac gtgacgagga acagcgccga
      481 gatcacgaac gaggtgagca tgaaccggcg gtggagctcg acgttgcggc ggcgaatgct
      541 caggtacccg gcgctcaagc acacgaccga ggccgtgttg aggcacgcca tgagtgtcgg
      601 caggggtcct tcggtcatca cgctagaaat ctcacttcgc gctctacgct ggtttcgtcg
      661 ggcgcgcgtt cgcccgcttc ggcttgcttg agcaaacgcc aaatgtgcgg gccgatcaaa
      721 tcgagctcgg tcgacatgta ttgttcgccg ccgaaggcgc gcactgtttc gctctgggcg
      781 ccgagcatgc gcacgtcttg tttgaagatc gagagggcga cgggttcgag gaacggtcgc
      841 acgagccagc tcgggatcgg cgagcgaaaa tcgacgacgg cgaaaaggcg cgtcacgaaa
      901 tcggagacgg gtgtgccgaa cgccgtcacg gtgaagtggc tctcgcggcc gagccggtat
      961 tcgacttgcg cgatggacgg caaaatgaag cggtcccagt gctcgaccgt gccgccgctc
     1021 ggcgagagca ggtagccgac ggcgccgctc ggccgcggtt cgcccgcgta ctcgacttcg
     1081 acgcgatcgg cggaacgacg cacggtcgca cggatctcgt tgcgcttgcc ggcgccgcga
     1141 aagaggccgc ggtgcaagaa cgcggtgtgt ggcacgtcga gggcgttctc gagcgtcgcg
     1201 tggagggtgc ccggggcttc gacgcgacgc acgacgcgcg cgtagccggc cggcgcgtcg
     1261 ccgagcgcga acggttcgtg cgtcggctct gcgtcgagct cggcccacac ccaaacgaag
     1321 ccgccttgtt cacgcgtcgc acaggcggga acccggcgtt cccgcgcttc gctcccgccg
     1381 atgaggcccg gcacgagcgc gcagcggccg gcgccctcga attgccagcc gtggtaagcg
     1441 cattcgagac gcccgcccgc gacgacgcga ccgagcgaga gcggggcatt ccggtgcggg
     1501 cagcggtcga gaagcgccgc tggtttgcca ccgtcggcgc gaaaaagcac gagcggcgtg
     1561 ccgaggagct ccaccggcac gggcttctta ccgagctcgt gcgattcgca cacgacgtac
     1621 caagcgtgcg aaaccttggc aatcgaggcg tgccccttcg tggggggcgg aacgagcttc
     1681 gcttcgggca cgggtgccct ccttctagca tctaggccaa ccgaatggcc gctcgagatc
     1741 cgttcttcca agacctcaca cgccgagacc ggtgttacat ttcccggcat ggtcgatcgg
     1801 aagacggcga gcttcatgcg ctcgctttgc atggggcaga tcgtcgaaga catcgtattg
     1861 ccgttccccg agatcgcaga ggcagacaaa gaaacgctcg aaggcgtgtt caccacgatc
     1921 tcgcagctct tgggttcgcg cgaagccgac ctcaaaaaat gggatcggca gggggagttg
     1981 ccggccgagt tcgtgaacga gctccgcgcg gcaggtctct tcagcttcgt gatccccgag
     2041 gcgagcgggg gcctcggctt cggcagcaag gcgtactcgc gcgcgct
//
LOCUS       DATIML010000330         2387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3820730, whole genome shotgun sequence.
ACCESSION   DATIML010000330 DATIML010000000
VERSION     DATIML010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3820730"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..570
                     /locus_tag="VLJ38_05675"
     CDS             <1..570
                     /locus_tag="VLJ38_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39033.1"
                     /translation="LKWSARLLLRPVAATFARRVVTLTPRPGESLQLLPAAELPDDLR
                     WAESNSVVAAAFARAASAIDAVGAATIPADVRALVNDQLARWYGEPMGISRAWVEAPI
                     GSLATAMRPAARLALLTALASFQVDATVVGAFSQQSSGDEALLGTVTWAAFTAARRVG
                     VWLGAPAAARRDGRDEFVEHPNGSRARPL"
     gene            567..1133
                     /locus_tag="VLJ38_05680"
     CDS             567..1133
                     /locus_tag="VLJ38_05680"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HSU39034.1"
                     /translation="MIEVDRVAVRWWRLAVLAAVIAVLLVLGKTTGLNAYLSADRLRA
                     VTHGAGVWGPIIFVLAFCVGELVHVPGVVFVAAAVLAYGRAGGGALAFAGALVAVSVS
                     FVIVRAIGGRPLAAIRWPLARRVLSRLEERPVRTILLLRLLLWMAPQLNYALALSNVR
                     FRSYFLGTALGLVAPIAGLVLLSDQVLR"
     gene            complement(1361..>2387)
                     /locus_tag="VLJ38_05685"
     CDS             complement(1361..>2387)
                     /locus_tag="VLJ38_05685"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSU39035.1"
                     /translation="LPSVGRAHLWQHAADALFLLEQDNIREAFFPTGRDLFVVERAQD
                     GDWPQIASICSVYDSADGLAALEAFFRHARHAVHVARSAPGDVAAFYVLSRSDQVPER
                     VLACDALSARWLEHHPRADAPALLLRRLLPSPTRATRAEAYAACVLDLKRSYVENPRT
                     TRLYAATSDVSDHPEWEPLGFREQPGLTAAGLARGGGPHSTFCLEFGAGGIFGWIGRL
                     VDAQYESPNPLDASSATAELAADQSSGFYLDEDLRRLVVDGRGVPLTPLQFNLLRHLA
                     KQPGRVIERDELVQAVWGRAFVGSNVVDATVRLLRKKLAAHADVIETVKGFGYRFRTT
                     PNPALQR"
BASE COUNT          359 a          775 c          820 g          433 t
ORIGIN      
        1 ctaaaatggt cggctcgctt gctgctcaga ccggttgcgg cgacctttgc acggcgagtc
       61 gtgacgctta cgcccaggcc gggcgaatcc ctgcagctct tgcccgccgc cgagctcccc
      121 gacgatctcc gctgggcaga gtccaattcc gtcgttgccg cggcgtttgc gcgcgctgcg
      181 tcggcgatcg acgcggtcgg tgcggcgacc atccccgcgg acgttcgcgc gctcgtcaat
      241 gaccagctcg cgaggtggta cggagaaccc atgggcatca gccgcgcttg ggtggaggcg
      301 ccgatcggtt cgctcgcgac ggcgatgaga cctgctgcac gcctcgcgct cctgactgcg
      361 ctcgcatctt ttcaggtgga cgcgacggtc gtcggcgcgt tttcgcagca atcatccgga
      421 gacgaggctc tcctcggtac ggtgacgtgg gctgcgttca cggcggcacg tcgcgtggga
      481 gtatggctcg gcgctccagc cgcggcgcgt cgggacggtc gtgacgagtt cgtcgaacat
      541 ccgaacggct cgagagcgag gccgctatga tcgaggtgga tcgcgtcgcc gtgcgctggt
      601 ggcggctcgc cgttctcgcg gccgtgatcg ccgtcctgct cgtgctgggc aagacgaccg
      661 ggctgaacgc ctatttgtcc gctgaccggc tgcgtgccgt gactcacgga gcgggcgtat
      721 gggggccgat catcttcgtg ctcgcgttct gcgtcgggga gctcgttcac gtgccgggcg
      781 tggtcttcgt ggccgccgcg gtactcgcct atgggcgcgc aggtggcggc gcgctggcgt
      841 ttgcgggagc gctcgtcgcc gtcagcgtca gcttcgtgat cgtccgcgcc atcggcggcc
      901 ggccgctcgc cgcgattcgc tggccgctcg cccgtcgcgt cttgtcgcgt ctcgaggagc
      961 gtccggtgcg caccatcctg ctgctccggc tgctcctctg gatggcgccg cagttgaact
     1021 acgcgctcgc gctctcgaac gtgcgcttcc gcagctactt cctcggcacc gcgctcggcc
     1081 tcgtcgcccc gatcgcaggg ctcgttctgc tatcggacca ggttcttcgt tgagggcaaa
     1141 gcaactggag cacacatgca aaaggatcca gtctgtggaa tgagcgttga cgcagcaacg
     1201 gcgaagtacc gcttcgctca gggagaccaa gagtacgtct tctgcggcgc gtactgttcg
     1261 aaggagtttc agcgcgaacc gtccaagtat ctcgcgcccg aatatcgacc ctcgatgttg
     1321 cggttgttcg tgaagttcgt gggcgaccgc ttacggtccc tcatctctgg agcgcggggt
     1381 tcggcgtcgt ccgaaaccga tagccgaacc ccttgacggt ctcgatgacg tcggcgtgtg
     1441 cagcgagctt cttgcgcagc aaacgcacag tggcatcgac gacgttgctg cctacgaagg
     1501 ctctccccca gacggcctgc acgagctcgt cgcgctcgat gacgcgcccg ggctgcttcg
     1561 ctagatggcg caacaggttg aactgtagcg gcgtgagggg cacgcctctg ccatcgacga
     1621 cgagccggcg cagatcttcg tcgaggtaaa atccggagct ctgatcagcg gcgagctccg
     1681 ccgtcgcgct cgaggcatct agcgggttcg gcgattcgta ctgggcatcg acgagcctgc
     1741 cgatccaacc gaagatgccg cccgcgccga actccaagca gaacgtcgag tggggtccac
     1801 cgccgcgagc caagcccgcc gcggtcaaac ctggctgctc tcgaaagccg agcggctccc
     1861 actcgggatg gtcgctcaca tccgacgtcg ccgcatagag ccgagtcgtg cgcgggtttt
     1921 cgacgtatga gcgcttcagg tcgagcacgc aagccgcgta ggcctcggct cgggttgcgc
     1981 gcgtcgggga agggagcagg cgccgtagca gcaacgccgg cgcgtcagcg cgtgggtgat
     2041 gctcgagcca gcgggcgctc agcgcatcgc aagcgagcac gcgttcgggg acttggtcgc
     2101 tcctcgacag cacgtagaaa gccgccacgt cgcccggcgc ggagcgagcc acgtgcacgg
     2161 cgtggcgtgc atggcgaaag aaggcttcga gcgcggcgag gccgtcggcg gagtcgtaga
     2221 cgctacagat ggaggcaatc tggggccagt ctccgtcctg tgcgcgctcg accacgaaca
     2281 ggtcacgtcc ggttggaaag aacgcttctc gaatgttgtc ttgttcgagc aggaacagcg
     2341 catcggcggc gtgctgccag aggtgcgctc gcccgaccga cggcaga
//
LOCUS       DATIML010000331         5425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_933677, whole genome shotgun sequence.
ACCESSION   DATIML010000331 DATIML010000000
VERSION     DATIML010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5425
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933677"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VLJ38_05690"
     CDS             complement(<1..364)
                     /locus_tag="VLJ38_05690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39036.1"
                     /translation="MQGVEFFRDGDQLQAILVRASASSSEKYNFLTDSSAPLQLGMNF
                     YRAGDTIPAHAHLPRDIQLNQIQEVIVIGHGKTRLVLYDRDKKKLAETVLTQGDIVLL
                     AGGGHGFEILEDTKIVEVK"
     gene            complement(502..2115)
                     /locus_tag="VLJ38_05695"
     CDS             complement(502..2115)
                     /locus_tag="VLJ38_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39037.1"
                     /translation="MLSAHQPGAADSQAWPFWNSAAPRAQKLLGIAVLLIVATGLFLR
                     VRGYLFRVPAFWLDECGWAMLLVEQPLSELSIRPMGFIITSQIMARLFGLTEMTLRAL
                     PWLAGMATTVLAVPLARELFRTYAARLLFVFVIALHPCAIDFSKEFKPYSVSLFLHMS
                     LVLFTLLYLRTGLGKHLGWTLATAAVGGFFAQDLIFAFPAVFVLTGLAALHVKRAHVY
                     AVVAVAGVILLSLGAQYLLMWRYVTTQEVDNWATKYSVFYSPDSGETPASWALKHYLD
                     MSGFPGFRRALWNPGPVSHETLSSLALVDRVVWACLHFVGLFVLLRQRRREAVLLLVP
                     LATLWLFNLLRLWPIGVFRANLFVVGYMAAIASMALDGGKRALPRLWDALPALLLVFL
                     PIALLDRAWSVRKQALTYSSEFPSALDELLKLKRADGNGRETLLLDRRSCDPFRYYTE
                     FHPTVRARVRDLLKAQFDVRCIEKDPPFSAETNAATPAPPGEVWEILHADRPLRDTIR
                     HHRLASGRMRHESRVGAHYVIAFSRKGQQ"
     gene            2368..3126
                     /locus_tag="VLJ38_05700"
     CDS             2368..3126
                     /locus_tag="VLJ38_05700"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU39038.1"
                     /translation="MSVFGNYSRYYDLLYRHKDYRGESAYIHSLIEKHRPGARTLLDL
                     GCGTGRHASLLAERGYDVTGVDRSPDMLAEARARGASGGRTEFVEGDLRSARLGREFD
                     VVVSLFHVMSYQTTNADLAAAFATLRAHLAPGGLFIFDCWYGPAVLNLRPAVRVLRLE
                     DDRTAVTRLAEPVLHPNANVVDVNYHVFVKDKQTSQVSELREKHSMRYLFAPEVEFLL
                     ASAGLTARGLEAFMAEGGPGLDTWTAVFLGGVGE"
     gene            3123..4136
                     /locus_tag="VLJ38_05705"
     CDS             3123..4136
                     /locus_tag="VLJ38_05705"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSU39039.1"
                     /translation="MSKRASVLRVGVKFVAGPLIVACVAYFFYRAFQRNWASIQAQHL
                     AFQPAYLALAVVCMLVTYLVPTYGWQFTVNALGGGNKLTFSQTVAVVNSSNLVKYVPG
                     KVLTYALQMYWLAKHGFSKSLVIYVNALNLLISLAVSIIVGFICLLFSPSPIPTSVTL
                     GIVALGSVLDVLGFKYHAAVLKLMIRLYNRLFKRDVRYVEVPGSLLARLHLVHLISVL
                     AFGISAYFTSLGIGYYLPPSSAPRLMAAILIADTVAFFAVITPGGLGVREGLMYLALG
                     GAKGSSLALTLPIATRAVHMTVDVLLGGTAFKLLGNLTKGTGATPPLEEPSPDSIPKA
                     EPR"
     gene            4133..5209
                     /locus_tag="VLJ38_05710"
     CDS             4133..5209
                     /locus_tag="VLJ38_05710"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU39040.1"
                     /translation="MNAREAKPLDVCLVCYPFYPTKDSGRGVDRYCFELIDQLGRTGA
                     RVSTPGVTHGSSEGVLAAGKKLAALVTELPRARADVYHAASPPAGAAAILARKTPVVV
                     SVHDLLPFQVTAYNVALKSSYARWATTFCIRHAAALIVPFQVTKEELVRKHGADPAKI
                     HVVHFGLDHGTYFPRHELERRPREVLYLGEVSRGKGVDVLIHAFAEIERELPAAKLLI
                     CGKPNRDQPGLEELCRSLGLENVEFRGFVPEAELPAYYARATVMTFPSRYGFGLSSLE
                     AMACGTPVVVAATLDAPEFIGDGGLLARPEDAHDLARHIRRLLEDQPFRDELSRKGIA
                     RARLFSWAEMAKNTRDVYERALMR"
     gene            complement(5185..>5425)
                     /locus_tag="VLJ38_05715"
     CDS             complement(5185..>5425)
                     /locus_tag="VLJ38_05715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39041.1"
                     /translation="AIVYSPVFDKILWSRFHSGSMEDLRLATASMRRAVDHGVPVYVC
                     LKRELRGFDRALERRGLLRVPVDAPLRCYRISARS"
BASE COUNT          928 a         1751 c         1783 g          963 t
ORIGIN      
        1 gcttgacctc gacgatcttc gtgtcctcga ggatctcgaa gccgtggccg ccgcctgcga
       61 gcagcacgat gtcgccctgc gtgaggacgg tctcggcgag cttcttcttg tcgcgatcgt
      121 agagcacgag ccgcgtcttg ccgtggccga tcacgatcac ttcctggatc tgattgagct
      181 gaatgtcgcg cggcagatgc gcgtgcgccg ggatcgtatc gcccgcgcgg tagaaattca
      241 tgccgagctg gagaggcgcg ctcgagtcgg tgagaaagtt gtacttctcg ctgctcgagg
      301 cggaggcgcg caccaggatc gcttgcagct ggtccccgtc ccggaaaaac tcgacgcctt
      361 gcatcgggcg tcaaatacgc tcgggaacgc catgttgcaa ggcgcgctcg ggtgccaaac
      421 cgaggtcggt ccgacggccg acggtcgcgc gccacaggca gcccgttcga cggcttcgcg
      481 agagccgagc tctccgccgc gtcattgctg acccttgcgc gagaacgcga tcacgtagtg
      541 cgcgccgacg cgcgactcgt gacgcattcg accgctggcg agccgatggt ggcggatggt
      601 atcccgtaga gggcggtcgg cgtgcaggat ctcccacacc tcgcccgggg gcgctggggt
      661 tgctgcgttg gtttccgcac tgaacggcgg atccttttcg atgcagcgca cgtcgaattg
      721 cgctttcaag aggtcccgta cgcgggctct gaccgtcggg tggaattcgg tgtagtaacg
      781 gaacgggtcg cagctgcggc ggtcgagcag cagagtctct cgtccattcc catcggcgcg
      841 tttgagcttc agtagttcat cgagcgcact cgggaattcg gaagaatacg tgagcgcttg
      901 tttgcgaaca ctccacgctc gatcgagcag cgcgatcggc aagaagacga gcagcagtgc
      961 gggtagcgcg tcccagagac gcggcagcgc tcgcttcccg ccgtcgagcg ccatgctcgc
     1021 gatggccgcc atgtagccga ctacgaacag gttcgcgcga aagacgccga ttggccacaa
     1081 gcggagcaag ttgaaaagcc acagcgtggc gaggggaacg agcagcagga cggcctcccg
     1141 gcgccgctgc cggagcaaga cgaacaagcc gacgaaatgg aggcacgccc acacgacgcg
     1201 atcgacgagc gcgagcgacg atagcgtttc atgactaacg ggccctggat tccacagcgc
     1261 gcgacggaaa ccgggaaacc cgctcatgtc gaggtagtgc ttgagcgccc agctggcggg
     1321 tgtttcgccg ctgtcggggc tgtaaaacac gctgtacttg gtagcccaat tgtcgacctc
     1381 ctgcgtcgtg acgtaacgcc acatcagcag gtattgcgcg ccgagggaca gcaagatgac
     1441 gcccgccacg gcaacgaccg cgtacacgtg ggcgcgcttg acgtgcagcg cagccaggcc
     1501 cgtgagcacg aaaacggctg gaaacgcaaa gatgaggtct tgtgcgaaga agccgccgac
     1561 tgccgccgtc gcgagcgtcc agccgaggtg cttgccgagc cctgtccgca ggtaaagcag
     1621 cgtgaacagc acgagactca tgtgtaaaaa caggctgacc gagtagggct tgaactcctt
     1681 gctgaagtcg atcgcacagg ggtgcagggc gatgacgaag acgaacaaca gcctcgccgc
     1741 ataggtccta aacagctcgc gcgcgagcgg cacggcgagc acggtagtag ccatgcccgc
     1801 cagccagggc agcgcccgta gcgtcatttc cgtcagaccg aagagtcggg ccatgatctg
     1861 actcgtgatg atgaatccca tggggcgaat ggagagttcg ctcaatggtt gttccacgag
     1921 gagcatggcc caaccgcatt cgtcgagcca gaacgccggc actcgaaaca aatagccgcg
     1981 tacgcgcagg aaaaggcccg tcgcgacgat caggagcaca gcgatgccca gtagcttttg
     2041 ggcgcgtgga gcagcggagt tccagaacgg ccatgcctgg ctgtcggcgg cgccgggctg
     2101 gtgagcggag agcatgcccg ggatactacc gggtttcacc tgcggtgcat cgcccggccc
     2161 gctggcggat ccagcgtcca cacgaggtcc gtccgtcgtg cagccgcgcc gccaactccg
     2221 cccaagcttg ccattttcga gaaagcgggt tctgatgccg cgcgggcgtg cgcggtatcg
     2281 agtcatccat cagtgtgctt gacgtggcct tgttcctcgt gcggacgcag cgtgcattgg
     2341 aattgagcga cgagcgcggg agcctcgatg tccgtcttcg gtaactactc acgttattat
     2401 gatctgctct atcgtcacaa ggactatcgg ggcgagagcg cgtatatcca ctcgctgatc
     2461 gagaagcacc gtcccggcgc gcgcacgctg ctcgatctcg gttgtggcac cggccggcac
     2521 gcgagcctgc tcgccgaacg cggctacgac gtgaccggcg tcgaccgctc gccggacatg
     2581 ctcgccgagg cgcgggcgcg cggggcgagc ggcggtcgca cggagttcgt cgaaggcgac
     2641 ttgcgttcgg cgcggctcgg tcgagaattc gacgtcgtcg tctcgctctt tcacgtcatg
     2701 agctaccaga cgacgaacgc ggaccttgcg gcggcgttcg cgacgctgcg cgcgcacctc
     2761 gcgccaggcg gcctcttcat cttcgactgc tggtacggcc ctgccgtctt gaacctccgg
     2821 cccgccgtgc gcgtgctgcg gctcgaggac gaccgaaccg cagtcacgcg cctggccgag
     2881 cccgtgctcc acccgaacgc gaacgtcgtc gacgtgaact atcacgtgtt cgtcaaagac
     2941 aagcagacga gtcaagtctc cgagctgcgc gaaaagcaca gcatgcgcta tctcttcgcg
     3001 cccgaagtcg agttcctgct cgcgtccgcg gggctcacag cgcgcgggct cgaggcgttc
     3061 atggccgagg gcgggcccgg tctcgacacc tggacggcgg tctttctcgg cggcgtcggc
     3121 gagtgagcaa gcgcgcgtcc gtcctccgcg tcggcgtcaa gttcgtcgcc ggcccgctga
     3181 tcgtcgcgtg cgtcgcttac ttcttttatc gcgccttcca gcgcaattgg gcgagcatcc
     3241 aggcgcagca cctcgcgttt cagccggcgt atttggcgct cgccgtcgtc tgcatgctcg
     3301 tcacctacct ggtaccgacc tacggctggc agttcacggt caacgcgctc ggcggcggca
     3361 acaagctcac gttttcgcag accgtcgccg tggtcaattc gagcaatctc gtcaagtacg
     3421 tgccgggcaa ggtgctgacc tacgccttgc aaatgtattg gctcgccaag cacggcttct
     3481 cgaagtcgct cgtcatctac gtcaatgcgc tgaacctcct catctcgctc gccgtctcga
     3541 tcatcgtcgg cttcatctgt ctgttgttct cgccgagccc gatcccgacg agcgtgacgc
     3601 tcgggatcgt ggcgctcggc agcgtgctcg acgtgctcgg cttcaagtac cacgcggccg
     3661 tgctcaagct gatgattcgg ctttacaacc ggctgttcaa gcgcgacgtg cgttacgtcg
     3721 aagtgccggg ctcgctgctc gcgcgcttgc acctcgtgca tttgatttcc gtgctcgctt
     3781 tcggaatttc cgcgtatttc acgagcctcg ggatcggcta ttacctgccg ccgagctcgg
     3841 cgccgcggct gatggcggcg attctgatcg cggacacggt ggcgttcttc gcggtgatca
     3901 cgccgggcgg cctcggcgtg cgcgaagggc tcatgtacct cgcgctcggc ggggccaagg
     3961 gctcgtcgct cgcgctcacg ttgccgatcg cgacgcgcgc cgtgcacatg acggtcgacg
     4021 tcttgctcgg cggcacggcc ttcaagctgc tcggcaattt gacgaaaggc accggcgcca
     4081 cgccgccgct cgaggagccg tcgccggact ccattcccaa ggccgagccc cgatgaacgc
     4141 gcgcgaagcc aagccgctcg acgtttgcct cgtgtgttac ccattctatc cgacgaagga
     4201 cagcggacgc ggcgtcgatc gctactgctt cgagctcatt gaccagctcg ggcgcacggg
     4261 cgcgcgcgtc tcgacgcccg gcgtcacgca cggctcgtcc gagggagtgc tcgctgccgg
     4321 caagaagctg gcagcgctcg tgacggagct gccgcgcgcg cgagcggacg tgtatcacgc
     4381 cgcttcgccg cccgcgggcg cggctgcgat cttggcccgc aagacgccgg tcgtcgtctc
     4441 ggtgcacgat cttttgccgt ttcaggtgac ggcctacaac gtcgctttga aatcgagcta
     4501 cgcgcgctgg gcgacgacgt tctgcatccg gcacgccgcg gccctaatcg tgccgtttca
     4561 ggtcaccaag gaagagctcg tccgcaagca cggcgccgat cccgcgaaga tccacgtcgt
     4621 gcatttcggg ctcgatcacg gcacgtattt tccgcggcac gagctcgagc gccgcccgcg
     4681 cgaggtgctt tatctcggcg aagtgagccg cggcaaaggc gtcgacgtcc tgatccacgc
     4741 gttcgccgaa atcgagcgtg agctcccggc ggcgaagctc ttgatttgcg gcaagccgaa
     4801 ccgcgatcaa ccggggctcg aggagctctg ccggagcctc gggctcgaga acgtcgagtt
     4861 tcgcggcttc gtgccggaag cggaattgcc ggcctactat gcgcgggcca cggtgatgac
     4921 gtttccgtca cgctatggct tcgggctttc gagcctcgaa gcgatggcgt gtggcacgcc
     4981 ggtcgtcgtg gcagcgacgc tcgacgcgcc ggagttcatc ggcgacggag gtttgctcgc
     5041 acgcccggag gacgcgcatg atctggctcg ccacatccgg cgcctactcg aggaccagcc
     5101 gtttcgcgac gagctctcac gcaagggcat cgcgcgcgca cggctctttt cgtgggccga
     5161 gatggcgaag aacacccgcg acgtctacga gcgcgcgctg atgcggtagc agcgcagtgg
     5221 ggcgtccacg ggcacgcgca gcaggccgcg ccgctcgagg gcgcggtcga agccgcgcag
     5281 ctcccttttc aagcacacgt aaacgggcac accgtggtcc acggcgcgcc gcatggacgc
     5341 cgtggccaga cgcagatctt ccatgctgcc gctatggaag cgggaccaca ggattttgtc
     5401 gaataccggg gagtatacga tggcg
//
LOCUS       DATIML010000332         5159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_356923, whole genome shotgun sequence.
ACCESSION   DATIML010000332 DATIML010000000
VERSION     DATIML010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5159
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356923"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..733)
                     /locus_tag="VLJ38_05720"
     CDS             complement(<1..733)
                     /locus_tag="VLJ38_05720"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39042.1"
                     /translation="MTAVVLGALALLVYTYAGYPLLLLVWSRVAPRSLSSRSDFEPLV
                     SVCIAVHNGERYLAEKIRSLSELDYPREKLEILVYSDGSTDQTIALAEALARDDPRVR
                     VFATAERRGKPSALNRLREQARGEVLLMTDVRQTLSPPSLRALLEPLADPAVGCVSGT
                     LVLAGETGPSAYWRYERFIRTCEARRGSMVGVSGSLYAVRREDFGALPEDVLLDDMFV
                     PLSLVRSKKRSVLSERALAFDEACDD"
     gene            complement(730..1887)
                     /locus_tag="VLJ38_05725"
     CDS             complement(730..1887)
                     /locus_tag="VLJ38_05725"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39043.1"
                     /translation="MSTFSIAHVLSSFGMGGQERVALDLASWQRKRGHRVIAISIAPE
                     PEGPLAELFRAADVRAETMPKYSGLDASLPVRLAALLGAEKVDVVHTHNPHAMIYGAP
                     AASLVRAKSVHTKHGMNPDAARRLWLRRTAATLVDAYVAVTPALAKVAAERTECDPTR
                     IHVVPNGIDVTRFAPSPEARARVRQELGIPGDSWLVGTVGRLAPEKDQALLIRAMAPL
                     LDERRQLMLVGDGPERAALEQACSDSWRAEYCHLIGARADVAPYLAAMDAFVLSSRTE
                     GLPLGLLEAMATGVPVVSTAVGGIPDLIDSGKNGVLVASGDEKALLRELVTLAGQPTA
                     GLRLGQAGRETVLARYSLSQMAERYEELYEQVVTPARTAQRPAPTAEDLGA"
     gene            complement(1884..2702)
                     /locus_tag="VLJ38_05730"
     CDS             complement(1884..2702)
                     /locus_tag="VLJ38_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HSU39044.1"
                     /translation="MAVPSSVRLASASYQISREVPVSREESLEVLPRGLAVRFTKRAI
                     DILIASIGLVLGAPIFALIALAVRLDSKGPIFYRQWRASMLEARRGNGELHFGRFQMI
                     KFRSMRVDAERGTGAVLAEENDPRITRVGRFLRKTRLDELPQLWNVLTGDMSVVGPRP
                     ERPELLENLACAIPFFEERLRGTKPGITGLAQVSLTYTGRPPEGSEIAALGETIVNPF
                     HFEEAEGSLADDMRTKLLFDLAYVAALEHFWTYLRLEIAILFRTPLVMFRGVGR"
     gene            2701..3156
                     /locus_tag="VLJ38_05735"
     CDS             2701..3156
                     /locus_tag="VLJ38_05735"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39045.1"
                     /translation="MIRLSVPGNLRYRDIVLRVVASACRLLRPHRATKQETSREGEAA
                     DFDDKVVSAVGEAFNNVAIHAYRGRSAGAVELELDVGEDAVTIRLCDTGKSYDPTHQP
                     PPELDLLPDSGMGLYIMRSCMDHVSYRAGNPPHEPNVLTMSKRYPAAQA"
     gene            complement(3118..4467)
                     /locus_tag="VLJ38_05740"
     CDS             complement(3118..4467)
                     /locus_tag="VLJ38_05740"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39046.1"
                     /translation="MRALVVAYAFPPVGGAGVQRMLKLVKYLPEHGVLPCVLSVERPS
                     VPVLDASLLREVPHAVSILRAPTLEPSYAAKDLAWRAHADARKRPSQRPLRALAQLGR
                     KLLVPDPQVLWLPGAAQALVRRLRAEHDDVVLISGPPFSQFLLGLLARGVCRTPFVLD
                     YRDEWTTTNSIYEMSGSARAAERLERAVLARASAVTTATEEFREHLLERFPSLEPART
                     FAIPNGYDSADFPAELPAPASDRLVITYTGTVFRLTSARGFLDGLRLFHAREPSLAAR
                     LAVHFVGRIVETEVDAFDGTEALRVERIGYLPHAQALSALAASHLALCLLADLPGAER
                     IYPAKIFEIMRLKRPALVLTPEGALARLVRRHRLGELVPPNDPSAIAAALERAVRAFV
                     GGTLPLTSDAVDVERFDRRSLAGEFAHALELACGAAPAHPRSTPSSRLSGGVALAHR"
     gene            complement(4470..>5159)
                     /locus_tag="VLJ38_05745"
     CDS             complement(4470..>5159)
                     /locus_tag="VLJ38_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39047.1"
                     /translation="YAPKCARYGCKTRTVQKATRSFVFVRPALLIVDDRVELDEPDVS
                     VVWAAHLTKQPALDGDLASALVGGSRVDVRTLEPAGAPHRAPREPTPSGEGSHRANKP
                     WGPMWRLEVESPTGARSRGFLHAISAGPAALAPPPARSLSGQHVRGVALRGAGESVGV
                     LWAEPDTRAEATLDGSLDVLVVAGLTPGRRYRVDVDGACHLAIAPADGGASLVATSGG
                     FVRTSAHCGAH"
BASE COUNT          898 a         1719 c         1780 g          762 t
ORIGIN      
        1 cgtcgtcgca cgcttcatcg aacgcgagcg cgcgctcgga gagcacgctg cgcttcttcg
       61 agcgcacgag cgagagcggc acgaacatgt cgtcgagcag gacgtcctcg ggcagcgcgc
      121 cgaagtcttc acgccgcacg gcataaagac tgccgctgac gcccaccatc gagccccgac
      181 gcgcttcgca ggttcggatg aagcgctcgt accgccagta cgcgctcggc ccggtttccc
      241 ccgcgagcac gagcgtcccc gaaacacaac ccacggccgg atcggcgagc ggctcgagca
      301 gcgcgcgcag tgacggcggc gagagcgtct ggcgcacgtc cgtcatgagc aggacctcgc
      361 cgcgcgcctg ctcgcgcaag cgattgagcg cgctcggctt gccgcggcgc tccgcggtcg
      421 cgaacacgcg gacgcgcggg tcgtcccgag cgagcgcttc cgcgagcgcg atggtctggt
      481 cggtcgagcc gtccgagtag acgaggattt cgagcttttc gcggggatag tcgagctcgg
      541 agagactccg gatcttttca gccaggtagc gctcgccgtt gtgcaccgcg atgcacacgc
      601 tgacgagggg ctcgaaatcg ctgcgactcg agagcgagcg cggcgcgacg cgtgaccata
      661 cgagcagcag caacggatag cccgcgtacg tgtagacgag cagggcgagg gcgccgagca
      721 ccaccgccgt catgcgccta ggtcttcggc cgtcggcgcg ggacgctgcg ccgtccgcgc
      781 cggcgtgacg acctgctcgt acagctcttc gtaacgttcg gccatctgcg agagcgagta
      841 acgagcgagc acggtttcgc ggcccgcttg gccgagcctg agcccggccg tcggttgacc
      901 cgcgagcgtc acgagctcgc gcaagagcgc cttctcgtcg ccggacgcca ccagcacacc
      961 gtttttgccc gagtcgatca gatccgggat gccgccgacg gcggtgctca cgacgggaac
     1021 gcccgtcgcc atggcctcga gcagaccgag cggcaaccct tccgtacgcg aggagagcac
     1081 gaacgcgtcc atcgccgcga gatagggcgc gacatcagcg cgggcgccga tcagatggca
     1141 atactcggcg cgccagctgt cgctgcacgc ctgttcgagc gccgcgcgct ccgggccgtc
     1201 gccgacgagc atgagctggc ggcgctcgtc gagcagcggc gccatcgcgc gaatcaagag
     1261 cgcttgatcc ttctcgggcg cgagccgccc gaccgtgccc acgagccacg agtcaccggg
     1321 aatgccgagc tcttgccgca cgcgggcgcg cgcctccgga ctcggcgcaa agcgcgtcac
     1381 gtcgataccg ttcggcacga cgtgaatgcg agtcggatcg cactccgtac gttcggccgc
     1441 gactttggcg agcgcgggcg tcacggcgac gtaggcatcg acgagcgtcg cagccgtgcg
     1501 gcgtagccaa agccgccgcg ccgcgtcggg attcatgccg tgcttggtgt ggacgctctt
     1561 cgcgcgcacg aggctcgcgg ccggagcgcc gtagatcatc gcatgcgggt tgtgcgtgtg
     1621 aaccacgtcg actttctcgg cgccgagcag cgcggcaagc cgcacgggca gagacgcgtc
     1681 gagccccgaa tacttcggca tcgtttccgc gcgcacgtcg gcggcacgga agagctcggc
     1741 gagcggcccc tcgggctcgg gcgcgatcga aatcgcgatc acccgatgtc cgcgtttccg
     1801 ttgccagctc gccaagtcga gcgcgacacg ctcctggccg cccataccga acgacgaaag
     1861 aacgtgcgca atcgagaaag tgctcatcgg ccgactcctc ggaacatgac cagcggtgtc
     1921 ctgaacaaga tggcgatttc gagcctcaga taggtccaaa agtgctcgag cgccgcgacg
     1981 tacgcgagat cgaacaagag cttggtacgc atgtcgtcgg cgagcgagcc ctcggcttct
     2041 tcgaaatgaa agggattgac gatggtttca ccgagcgcag cgatctcgct gccctccgga
     2101 ggtcggcccg tgtacgtgag tgaaacctgc gcgaggccgg tgatgccggg tttcgttccg
     2161 cgcaggcgct cttcgaagaa cggtatggcg caggcgagat tttccagcaa ttcgggacgc
     2221 tcgggccgtg gaccgacgac gctcatatcg cccgtgagca cgttccagag ctgcgggagt
     2281 tcgtcgagcc gcgtcttgcg caagaagcgt ccgacgcgcg tgatccgcgg atcattttct
     2341 tccgccaaca cggcgcccgt gcctcgctcg gcgtcgacac gcatggaccg gaatttgatc
     2401 atttgaaagc ggccgaaatg aagctccccg ttccctcttc tcgcctccag catcgaagcg
     2461 cgccactgtc ggtaaaaaat tggacccttc gagtcgagtc tcacggccaa ggcgatgagc
     2521 gcaaagatgg gagcacccaa gaccagaccg atgctggcaa tcaaaatgtc gatggcgcgt
     2581 ttcgtgaaac ggaccgcgag ccccctcggc aacacctcga gagactcttc ccgtgaaacc
     2641 ggcacttccc gcgagatctg gtaggatgca gaagcgaggc ggacggaaga aggaactgcc
     2701 atgattcgcc tttcggtacc cggcaacctg cgctatcgag acatcgtcct gcgcgtagtt
     2761 gcttcggcgt gtcgcctgct gcgaccgcac cgagcaacta agcaagaaac aagccgcgag
     2821 ggtgaagcgg ccgactttga cgacaaggtc gtctctgccg tcggcgaggc attcaacaac
     2881 gtggcaattc acgcctaccg gggccgatcg gcgggcgcgg ttgagctcga gctcgacgtg
     2941 ggggaggacg ccgtcaccat tcgcctgtgc gacaccggca agagctacga tccgacgcac
     3001 cagccgccgc cggagctcga tcttctgccc gactccggta tgggccttta catcatgcgc
     3061 tcgtgcatgg atcacgtgag ctatcgggcc ggcaatccgc cccacgagcc caacgtccta
     3121 acgatgagca agcgctaccc cgccgctcag gcgtgaggac ggcgtgctgc gtggatgcgc
     3181 cggcgctgcc ccgcaggcga gctcgagcgc gtgcgcgaat tcaccggcga ggcttctgcg
     3241 gtcgaagcgt tcgacgtcga ccgcatccga cgtgagcggc agcgtgcccc cgacgaacgc
     3301 acgcacggcg cgttcgagcg ctgccgcaat agcgctcggg tcgttcggcg gcacgagctc
     3361 gccgagccgg tgcctccgca ccagacgcgc gagcgcgcct tcgggcgtga gcacgagcgc
     3421 gggccgtttg agtcgcatga tctcgaagat cttggccggg tagatgcgtt cggcgccggg
     3481 cagatcggca agtaagcaga gcgccaggtg actcgcggcg agcgccgaga gcgcctgagc
     3541 gtgcggcaga tagccgatgc gctcgacacg gagcgcctcc gtcccgtcga aagcgtcgac
     3601 ttccgtttcg acgatgcgac cgacgaaatg cacggcgagc cgggcggcaa gggacggctc
     3661 gcgcgcgtga aacaagcgta aaccgtcgag gaagccgcgc gcgctcgtca accgaaagac
     3721 ggtgcccgtg taggtgatga ccagccggtc gctcgcgggc gccggcagct cggcgggaaa
     3781 atcggccgaa tcgtagccgt tcgggatcgc gaaggtgcgc gccggctcga gcgaagggaa
     3841 acgctcgagc aagtgctcgc gaaactcttc cgtcgcggtc gtcacggcgc tggcgcgggc
     3901 gagtacggcc cgctctagcc gttcggcggc gcgcgcggag ccggacatct cgtagatcga
     3961 gttcgtcgtg gtccactcgt cgcggtaatc gaggacgaag ggcgtgcgac acacgccacg
     4021 ggcgagcagc ccgagcaaga actgggagaa cggagggccg ctgatgagca ctacgtcgtc
     4081 gtgttcagcg cgcaagcggc gcacgagcgc ctgtgccgcg ccgggtagcc agagcacttg
     4141 agggtccggc acgaggagct tgcgtccgag ttgcgcgagc gcgcgcagcg gccgctggga
     4201 gggccgtttt cgtgcgtctg cgtgcgcgcg ccacgcgaga tctttcgccg cgtagctcgg
     4261 ttcgagcgtg ggagcgcgga ggatcgagac cgcgtgcggc acctctcgca agagcgacgc
     4321 gtcgagcacg gggacgctcg gccgttccac gctgagcacg cagggaagga cgccgtgttc
     4381 cggcaaatac ttcacgagct tcaacatccg ctgcacgccc gcaccgccga ccggcgggaa
     4441 cgcgtaagcc acgacgagcg ctcgcacggt cagtgggctc cgcaatgcgc ggacgtgcgc
     4501 acgaaaccgc cgctcgtcgc cacgagtgaa gcgccaccgt cagccggcgc gatcgcgagg
     4561 tggcacgcgc cgtcgacgtc gacgcgataa cgtcgacctg gcgtgagccc cgcgacgacg
     4621 aggacgtcga gcgagccgtc gagggtcgct tcggcgcgcg tatcgggttc ggcccagagc
     4681 acgcccacgc tctcgcccgc tccgcgcagg gcaacgccgc gcacgtgctg tccactgagt
     4741 gaacgcgcgg gcggcggtgc tagagcggcg ggcccggcgc tgatggcgtg caaaaagccg
     4801 cgtgaacgcg cgcccgtcgg gctctccact tcgagccgcc acatcgggcc ccacggcttg
     4861 ttcgcgcggt gcgaaccctc gcccgaaggt gtcggttcgc gcggcgcgcg atgcggtgcc
     4921 cctgcgggct cgagcgtgcg cacgtcgacg cgcgagccgc cgacgagggc gctcgcgaga
     4981 tcgccgtcga gcgcgggctg cttcgtgagg tgggcggccc agacgaccga cacgtccggt
     5041 tcgtcgagtt cgacgcgatc atcgacgatc aggagcgcgg ggcgcacgaa gacgaaactg
     5101 cgcgtcgctt tctgcaccgt gcgcgtcttg cagccgtagc gggcgcactt gggagcgta
//
LOCUS       DATIML010000333         6903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2955672, whole genome shotgun sequence.
ACCESSION   DATIML010000333 DATIML010000000
VERSION     DATIML010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6903
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2955672"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..2785)
                     /locus_tag="VLJ38_05750"
     CDS             complement(53..2785)
                     /locus_tag="VLJ38_05750"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HSU39048.1"
                     /translation="MQSRLGAVAGVGVLVAGILFARARVARAQDAASVPRGNSGAVIK
                     PPAEEPPPPKAVIKDPVLLDFVNATYPPEAIEDGLEATVVLKLTIDREGHVTKVEIPE
                     PVGHGFDEAARAAALQFRFEPATRDGKAIPSIVRYPYKFTLTPVEAAPPPPPTTGILS
                     GRLRLAETDAPLVGEPVTLVGPDGSARQVTTDQDGRWHVENLAPGAYHVKIAVQGFVD
                     IDSVEEVAAGEETDVTLRIKPQTDEIEVIVGGERPAREVTRRTIERREIERIPGTNGD
                     ALRSLQSLPGVGRPPGLAGLLIVRGSAPQDSVTFVDGTGVPLIYHFLGLTSVLPTELL
                     DRIDFYPGNFSARFGRAMGGVVDVGLRSPNTQCIKDDGKPDPTKHNCFHGLLQADFID
                     ARVMLEGPLPIKGWSFLAAGRKSLINSWLKPALEATGASVTTAPIYYDYQLIAEHKTA
                     HTRTSLRFYGSDDRVAFIINDPFVQDPALGGSLRYGTAFYRAQLFYQTDLSSKATLTA
                     NLSAGKDSINFSVGNVRFDLKTVPIEWRYELGYTFTKGVKFNSGLDFELAPFDVHVRA
                     PDPPRPGEPDPGPYAARPPREANSKGLGFRPAWYGEFELQPIERLRLVPGLRADFARD
                     SGHGDLAPRISGRYDFVKGADADHPDRRKTTLKGGAGVYYQPPQFQETDLVFGTPGLY
                     SNRAVHYSVGIEQELTRQIDVSIEGFYKDMTDLVARGLNEQGAYTYNNLGTGYVVGGE
                     TLIRYKPDAHFFGWIAYTLSRSVRRDGPDLPQYLFQYDQTHNLTVLGSYRLGRGWEFG
                     ARFSLVSGSLDTPTLMQTDPGALPALYASDAGTYAKLDGTPFSRRLPLRHQLDLRVDK
                     RWQVKKVRISTYLDIQNVYNHASVEGFTYNYNFSQTGYQKGLPIIPSIGFRMEI"
     gene            2911..3678
                     /gene="xth"
                     /locus_tag="VLJ38_05755"
     CDS             2911..3678
                     /gene="xth"
                     /locus_tag="VLJ38_05755"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HSU39049.1"
                     /translation="MKIASFNVNGIRARLETVASWLARHEPDVLCLQETKVEDDEFPF
                     EELARLGYETRVTGQAGYNGVAIASRHPLSDVKLGLFDDGPSAERRLIAATVLGVRIL
                     DVYVPNGKSVALPSFLEKLRFLERLRVTLDVSEDAARELVVCGDFNVARTELDVFDPG
                     RFRGKLLFHPEEQRALARVLDFGLFDAFRQLHPEERRYSWWDYRGGDFRSNRGLRLDY
                     VFVTAAIAPRLRRAEIDVEPRGQPKPSDHAPVLVELD"
     gene            complement(3596..4726)
                     /locus_tag="VLJ38_05760"
     CDS             complement(3596..4726)
                     /locus_tag="VLJ38_05760"
                     /inference="COORDINATES: protein motif:HMM:NF019626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine/phenylalanine carboxypeptidase
                     domain-containing protein"
                     /protein_id="HSU39050.1"
                     /translation="MNAASDAALFEKAAETLVRAEERINLLGRVAPADVFGEAAKLAR
                     DYATRKPLVVTRAGDVSGLGPVRHAVAHVQRATEPLGLIGRLYAERAEELELEARLVE
                     ASGTPQFRLLAAERFPEPSLELGRACDAFVAEAERLVPPRAVELYRSDDETEPRSLIS
                     RLRLKVRELGLKFVVRVARSQLAAAATGNGVVSLRAGMRLTAAAAERITLHELLGHAL
                     PRARSRHATLPLLRAGTRGAADDEEGRALLVERRANLLDAERQRELALRHVAAVGVRR
                     GAEPRDTVDMLVARGAPVERAVELALRVQRGGGLGREIVYLPAYFAVASAFAEEPSLE
                     RWFERGRIGLLAARELNRALPTLEHDRTASAVPAVPRRSPLA"
     gene            4850..>6903
                     /locus_tag="VLJ38_05765"
     CDS             4850..>6903
                     /locus_tag="VLJ38_05765"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU39051.1"
                     /translation="MRHRLVASARPEGEFAPGFPARIGQYEVLGELGKGGVGVVFRAR
                     HVDTGALVALKTVRVRTTAHVSSVRREILALYRLHHPGIVRILDGGVFEGRPWYAMEL
                     LNGITLAQSIGGSYLDFSTIPTVTVEREREPSKAPAGTPRLLRSAVGGKLEELLTLFR
                     LLCAPLAYLHGEGIVHRDIKPGNIFIRPDGTPVLMDFGLVGRWRGALGREILEDTQTY
                     GGTLVYMAPEQIKGEVGDARSDLYALGCTLYEALTGLVPFEDFGGTLGATASELRPVA
                     PSEIVHGIPRGLDDLVLRLLAKDPRDRIGHADDVAAALAALGARDWPRDGLPRGRAYL
                     YQPRLVGRAEALGTVLEGVDSSRKLGGLLLLGGESGIGKTSLAAEVARFAYQREYEVV
                     TSECPAASPGRTERSLPLFPFRALLRRIVEHCRVGGPGVTARIVGPWQKLLASIEPAF
                     RELEPDNGALDPPGLPVAAALERLLGALSETILAFAHESTALLLVIDDVHWADGLSLA
                     LLARLGGQETERGAGRLVILGTYRKEETGTWLQSLLELPRTLHIELGRLGSEDVSKMV
                     ADMLGVGEAPADLAHFVARESEGNPFFAGEYLRAALDAGLLYRDAEGRWHQDESGSHR
                     TLPLPHNVRALVERRLAALSAQARALIDVAAVIGHDIEAEVLLSINARRLSSRPQTEG
                     ELV"
BASE COUNT         1067 a         2327 c         2360 g         1149 t
ORIGIN      
        1 gccgagagcg cgcagagcga cgccaacgtg ccgagtagga tcgccttcat gctcagatct
       61 ccatcctgaa gccgatactc gggatgatgg gcaggccctt ctggtagccg gtttggctga
      121 aattgtagtt gtaagtgaag ccctcgacgc tcgcgtggtt atagacgttc tgaatgtcga
      181 ggtaggtaga gatgcgcacc ttcttgacct gccagcgctt atcgaccctg aggtcgagct
      241 ggtgacggag cggcaagcgc cggctgaacg gcgtgccatc gagcttcgcg taggtgcccg
      301 cgtcggacgc gtacagcgcg ggcagcgcgc cggggtccgt ctgcatcaac gtgggcgtgt
      361 cgagcgatcc cgacacgagc gagaagcgcg ccccgaattc ccagccgcgc ccgagccgat
      421 agctgccgag caccgtgaga ttgtgcgtct gatcgtattg aaagaggtac tgcggcaaat
      481 ccggcccgtc ccggcgcacg ctgcgcgaaa gcgtgtacgc gatccaaccg aagaagtgcg
      541 cgtccggctt gtaccggatg agcgtctcgc cgccgacaac gtatccggtc ccgagattgt
      601 tgtacgtgta ggcgccctgc tcgttgagac cgcgcgcgac gagatccgtc atgtccttgt
      661 aaaacccctc gatgctcaca tcgatctgcc gcgtgagctc ctgctcgatc cccacggagt
      721 agtgcacggc gcggttcgaa tagagcccgg gagtcccgaa aacgaggtcg gtctcctgga
      781 attgaggcgg ctggtagtag acgcccgcgc ctcccttcaa cgtcgtcttg cgacgatcgg
      841 ggtgatcggc gtccgcgcct ttgacgaagt cgtagcggcc actgatgcgc ggcgccaaat
      901 caccgtgccc gctgtcgcgc gcgaagtcgg cgcgcaagcc gggcacgagc cgcaggcgct
      961 cgatgggctg gagctcgaac tcaccgtacc aggcgggccg aaacccgagg cccttgctgt
     1021 tcgcttcgcg cggcgggcgc gcggcgtacg gacctggatc gggctcacct ggccgcggcg
     1081 gatcgggcgc gcggacgtgc acgtcgaacg gcgcgagctc gaagtcgagc cccgagttga
     1141 atttgacgcc cttcgtgaag gtgtagccga gctcgtagcg ccactcgatc ggcacggtct
     1201 tcaggtcgaa gcgaacgttg ccgacggaga agttgatgga gtctttgccc gccgagaggt
     1261 tcgccgtgag cgtcgccttc gagctcaggt ccgtttggta gaagagctgc gcgcggtaga
     1321 acgccgtgcc gtagcgcagg ctgccgccga gcgccggatc ttggacgaac gggtcgttga
     1381 tgatgaaggc gacgcgatcg tccgagccgt agaagcggag cgacgtgcgc gtgtgcgctg
     1441 tcttgtgctc ggcgatgagc tgatagtcgt aatagatggg cgccgtcgtg acgctcgcgc
     1501 ccgtggcttc gagcgcgggt ttgagccagc tattgatcag tgattttctg cccgccgcga
     1561 ggaatgacca gcccttgatc ggcaatggtc cttcgagcat cacgcgcgcg tcgatgaagt
     1621 ccgcctgcaa caggccgtgg aagcaattgt gtttggtggg atcgggttta ccgtcgtcct
     1681 tgatgcattg cgtgttcggc gagcgcagcc ccacgtcgac cacgccgccc atggctcggc
     1741 cgaaacgcgc gctgaagttg cccggataaa aatcgatgcg gtcgaggagc tccgtcggta
     1801 ggacgctcgt gaggccgagg aagtgataga tcagcggcac gcccgtgccg tcgacgaagg
     1861 tcacgctgtc ttggggcgcc gacccgcgta cgatcaagag ccccgcgagg ccgggcggac
     1921 gtcccacacc gggcaagctc tgaagcgagc ggagcgcgtc gccgttcgtg cccgggatgc
     1981 gctcgatttc acgccgctcg atcgtgcggc gcgtgacctc gcgcgcgggc cgctcgccgc
     2041 ccacgatgac ttcgatctcg tcggtctgcg gcttgatccg gagcgtcacg tcggtctctt
     2101 caccggcggc gacttcttcg accgagtcga tgtcgacgaa gccttgcacc gcaatcttga
     2161 cgtgataggc gcctggcgcg aggttctcga cgtgccagcg gccgtcttgg tcggtcgtga
     2221 cttggcgcgc actgccgtcg ggcccgacga gcgtcaccgg ttcgccgacg agcggcgcgt
     2281 ccgtctcggc gagccgcagc cgtccgctca aaataccggt cgtgggcggc gggggcggcg
     2341 ccgcctcgac gggcgtgagc gtgaatttgt agggatagcg gacgatggac gggatcgcct
     2401 tgccgtcgcg cgtcgcgggc tcgaaacgaa actgaagcgc cgcagcgcgt gccgcttcgt
     2461 cgaagccgtg acccacgggt tccgggattt cgactttcgt gacgtgaccc tcacgatcga
     2521 tcgtgagctt gagcaccacg gtcgcttcga ggccgtcctc aatcgcttca ggcgggtacg
     2581 tggcattgac gaagtcgagc aggacgggat ccttgatcac ggccttcggc ggcggcggtt
     2641 cttcggccgg cggcttgatc acggcgccgg agttgccgcg cggcacggac gccgcgtcct
     2701 gcgcgcgcgc gacacgcgcc cgcgcgaaaa ggatgcccgc cacgagcacc cccacgccgg
     2761 cgacggctcc aagcctcgat tgcatcagcc ctcgcgtcta atgccacccc gcttcatcta
     2821 caagggggtt cgccgcgtgc ccagcgacca tggcattgtg ggccgccgtg cggccgagct
     2881 cgggcgcgag gtccggctat cctgccgcgc gtgaagattg cgagcttcaa cgtcaacggc
     2941 atccgcgccc ggctggaaac cgtcgcaagc tggctcgcgc gccacgagcc cgacgtgctc
     3001 tgcctgcagg agaccaaggt agaggacgac gagttcccgt tcgaggagct cgctcgactc
     3061 gggtacgaga cgcgggtcac aggtcaggcc gggtacaacg gggtcgcgat cgcctcacgc
     3121 catcccctga gcgacgtgaa gctcggcctg ttcgacgatg gcccgagcgc ggagcggcgc
     3181 ctcatcgcgg ccacggtgct cggcgtgcgg atcctcgacg tgtacgtgcc gaacggcaag
     3241 agcgtcgcgc tcccgagctt tctcgagaag ctgcgatttc tcgagcgcct tcgcgtcacg
     3301 ctcgacgtga gcgaggacgc cgctcgcgag ctcgtcgtct gcggcgactt caacgtggcg
     3361 cgcaccgagc tcgacgtgtt cgacccgggt cgctttcgcg gcaagctctt gtttcacccc
     3421 gaggagcaac gggcactcgc gcgcgtgctc gacttcggct tgttcgacgc gttccggcag
     3481 ctccatcccg aagagcgccg ttacagctgg tgggactacc ggggcggcga ctttcggagc
     3541 aatcgcggcc tgcgcctcga ttacgtgttc gtcacggctg ccatcgcgcc gcggctcagg
     3601 cgagcggaga tcgacgtgga accgcgggga cagccgaagc cgtccgatca tgctccagtg
     3661 ttggtagagc tcgattgagc tcgcgtgccg ccaggagccc gatgcgcccg cgctcgaacc
     3721 agcgctcgag tgacggctcc tcggcgaaag cgctcgcgac cgcaaagtaa gccggcaggt
     3781 acacgatctc gcggccgagc ccgcccccgc gctgaacgcg cagcgcgagc tcgacggcgc
     3841 gctccaccgg tgcgcctcgc gcgacgagca tgtcgacggt gtcgcgcggc tcggcacctc
     3901 ggcgcacgcc gaccgccgcc acgtgccgca gcgcgagctc ccgctgacgc tctgcatcga
     3961 gcaggttcgc gcggcgttcg acgagcagag cgcgaccctc ttcgtcgtcg gccgctccgc
     4021 gcgttccggc gcgcaagagc ggcagcgtcg catgacgaga gcgagcgcgc ggcagcgcgt
     4081 ggcccaagag ctcgtgcagg gtgatgcgct cggccgcggc cgccgtcagg cgcatacccg
     4141 cccgtagcga gaccacgccg ttgcccgtcg ccgccgcggc gagctggctc cgggcgacgc
     4201 gaaccacgaa tttcagaccg agctctctca ctttgagacg gagccgtgaa atcaggctcc
     4261 gcggctccgt ctcgtcgtca ctccgataga gctctaccgc tcgggggggc acgagccgtt
     4321 cggcctccgc cacgaacgcg tcacaagcgc gcccgagctc tagcgacggc tcgggaaagc
     4381 gctccgccgc gagcagccga aactgcggcg ttccgctggc ttccacgagt cgcgcttcga
     4441 gctcgagctc ctcggcacgt tcggcgtaaa ggcgtccgat gagcccgagc ggctccgttg
     4501 cgcgctgaac atgcgccacc gcatgccgca cggggccgag cccggaaacg tcacccgcgc
     4561 gagtgacgac cagcggcttt cgggtcgcgt agtcgcgcgc aagctttgcc gcttctccga
     4621 agacgtccgc cggcgcgacg cgccctagta aattgatgcg ctcttcggcg cggacgagcg
     4681 tttccgcggc tttctcgaag agggcggcgt cggacgctgc gttcacgagc gtaggataga
     4741 cgcgggtgca cgcgggacgc cactcgcgca ggcgaaagtc ctcgcgaaac tcctgcggcc
     4801 aggcctcaaa tatgagacgc tacgagtcca gtctttggag ctcccccacg tgcgtcatcg
     4861 gctcgtcgcg tcggcccgcc cggagggcga attcgcacca ggcttccccg cgcgcatcgg
     4921 gcagtacgag gtgctcggtg agctcggcaa gggcggcgtg ggtgtggtct tccgcgcgcg
     4981 gcacgtggac accggagcgc tcgtcgcgct caagaccgtg cgcgtgcgca cgacggcgca
     5041 tgtttcgagc gtgcgccgcg aaattctcgc gctctatcgg ctgcaccatc cgggcatcgt
     5101 gcgcatcctc gacggcggcg tgttcgaggg tcggccctgg tacgcgatgg agcttttgaa
     5161 cggcatcacg ctcgcgcagt ccatcggcgg cagctacctg gacttctcga cgatcccgac
     5221 ggtcaccgtc gagcgcgagc gtgagccgag caaggcaccc gcagggacgc cccggctctt
     5281 acgttccgcc gtcggcggca agctcgagga gctgctcacg ctgtttcgtt tgctgtgcgc
     5341 accgctcgct tatttgcacg gcgaggggat cgtccaccgc gacatcaagc ccggcaacat
     5401 tttcattcga cccgacggca cgccagtcct catggacttc ggactggtcg gacgctggcg
     5461 cggcgcgctc ggtcgcgaga tcctcgaaga cacgcagacc tacgggggca cgctcgtgta
     5521 catggcgccc gagcaaatca agggggaggt cggtgacgct cgcagcgatc tctacgcgct
     5581 cggttgcacg ctctacgaag cgctcaccgg gctcgtgccg ttcgaagatt tcggggggac
     5641 gctcggcgcg accgcgagcg agctcaggcc cgtcgcaccc tcggaaatcg tccacggcat
     5701 tccgcgcgga ctcgacgatc tcgtcttgcg cctgctcgcc aaggatccgc gcgatcgcat
     5761 cggacacgcc gacgacgtcg ctgcggcgct cgccgcgctc ggtgcccgtg actggccgcg
     5821 cgacggctta ccgcgaggcc gcgcctacct ctatcagccg cggctcgtcg gacgcgcgga
     5881 agcactcggc accgtcctcg agggcgtcga ttcctcgcgt aagctcggcg gcctactctt
     5941 gctcggcggg gagagcggca tcggcaagac gtcgctcgcg gccgaggtcg cccgcttcgc
     6001 ttatcaacgc gaatacgagg tcgtgacgag cgaatgtccg gcggcctctc ccggacgcac
     6061 cgagcgcagc ctgccgctct ttccgttccg cgcgttactg cggcgcatcg tcgagcattg
     6121 ccgggttggc gggcccggcg tgacggcgcg catcgtcggg ccctggcaga agctcctcgc
     6181 cagcatcgag ccggccttcc gcgagctcga gccggacaat ggcgcgctgg atccgccagg
     6241 gctgccggtc gcggccgcgc tcgagcgttt gctcggcgcg ctgtcggaga cgatcctcgc
     6301 gttcgcgcac gagagcacgg cccttttgct cgtgatcgac gacgtgcact gggcggacgg
     6361 actctcgctc gcgctgctcg cgcgtctcgg cgggcaggag acggagcgcg gcgccggccg
     6421 gctcgtgatt ctcggcacgt atcgcaaaga agaaaccggc acctggcttc agtccctgct
     6481 cgagctgccg cgcacgttgc acatcgagct cggccggctc ggctccgaag acgtctccaa
     6541 gatggtcgcc gacatgctcg gcgtgggcga ggcgccggcc gatctcgcgc attttgtggc
     6601 gcgcgaatcg gaaggcaacc cgtttttcgc cggtgagtac ctgcgggccg cgctcgacgc
     6661 gggcctgctc taccgcgacg ccgaaggccg ctggcatcag gacgagagcg gctcgcaccg
     6721 cacgttgccg ctgccgcaca acgtgcgcgc gctcgtcgag cgccggctcg ccgccctctc
     6781 tgcacaggcg cgcgccctca tcgacgtggc cgccgtgatc ggacacgaca tcgaggcgga
     6841 ggtgctcctg tcgatcaacg cgcggcggct gtcgtcgcgc ccccagaccg agggcgagct
     6901 cgt
//
LOCUS       DATIML010000334         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4691041, whole genome shotgun sequence.
ACCESSION   DATIML010000334 DATIML010000000
VERSION     DATIML010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4691041"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..487
                     /locus_tag="VLJ38_05770"
     CDS             <1..487
                     /locus_tag="VLJ38_05770"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSU39052.1"
                     /translation="KAKHWETEVGANDSVAWPTGIGGKGNDGVAAFVKQTPGAIGYIE
                     YVYAATSNQPMAELENKAGKFVAPTPEAAAAALTHVTLPDDLRAWVTDPEGDDSYPIA
                     TYTWILAKKKYADKTKADALKTLLKWCLSEGQTLAPSLHFLALPAPVVERVGKAAETI
                     E"
     gene            484..1455
                     /gene="pstC"
                     /locus_tag="VLJ38_05775"
     CDS             484..1455
                     /gene="pstC"
                     /locus_tag="VLJ38_05775"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HSU39053.1"
                     /translation="MTQSPATAVRPQVARAPTAFQTGWDIAFRALAHAFGAAVVLLLA
                     DIVFQVLRRGSGAFSKYGAHFVTSSVWDTNRGEFGILPEIAGTLYTSFWALLLAGFLG
                     VTLALVLSQRFLNTRAELVMKNIVELLAAIPSVVYGLWGIFVLVPLLRPPAAWLNQHF
                     GSFPLFATRLSGPGILPASLVLAIMILPTVTAVSREAMAAVPPRLAAAAYGLGATRWE
                     VIFRVTLPTAAGGIFGALVLGLGRAFGETMALAMLAGNAQTFSWSLFSPGNTLAALLA
                     NHFPEAGELEVGALMYAALVLLFITLAVNVLGSLIMLRARSGLKGLR"
     gene            1455..>1729
                     /locus_tag="VLJ38_05780"
     CDS             1455..>1729
                     /locus_tag="VLJ38_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39054.1"
                     /translation="MLGQAASRAEAPSPLHFSLKNARTLGDRLLTWFALLVSVIALFP
                     LFSVLYMLLVRGGQLLSPTLFSELTPGAGMEGGGIGNAVLGTLVVVAV"
BASE COUNT          254 a          610 c          557 g          308 t
ORIGIN      
        1 gaaggccaag cactgggaga ccgaggtcgg cgccaacgac agcgtcgcct ggccgaccgg
       61 aatcggcggc aagggcaacg acggcgtcgc cgccttcgtc aagcagaccc ccggcgccat
      121 cggctacatc gagtacgtct acgccgcgac gagcaaccag ccgatggcag agctcgagaa
      181 caaggccggc aagttcgtcg cgcctacgcc cgaggcggcc gccgcggcgc tcactcacgt
      241 cacgctgccc gacgatttgc gtgcctgggt caccgatccc gaaggcgacg actcttaccc
      301 gatcgccacc tacacctgga tcctcgccaa gaagaagtac gccgacaaga cgaaggccga
      361 cgcgctcaag acgctgctca agtggtgcct gagtgaaggc cagacgctcg cgccgagcct
      421 gcactttttg gcgctgccgg cgcccgtcgt cgaacgcgtc ggtaaggccg cggagaccat
      481 cgagtgaccc agagcccggc gaccgccgtc cgcccgcagg tggcgcgagc tcccacggcc
      541 tttcaaacgg gctgggacat cgcgttccgc gcgctcgccc acgcgttcgg cgcggccgtg
      601 gtgctcctgc tcgccgacat cgtcttccaa gtgctcagac gaggaagcgg cgcgttttcg
      661 aagtacggcg ctcacttcgt cacgagctcg gtttgggaca cgaaccgcgg cgagttcggc
      721 atcctgcccg agatcgcggg cacgctctac acgtcgttct gggcgctcct gctcgcgggt
      781 ttcctgggcg tgacgctcgc gctcgtcttg agccagcgct ttttgaacac gcgcgccgag
      841 ctcgtgatga agaacatcgt cgagctgctc gcggcgatcc cgagcgtcgt ctacggcctg
      901 tggggcatct tcgtgctcgt gccgctgctc aggccgcccg ccgcgtggct gaaccagcat
      961 ttcggctcat tcccgctgtt cgccacgcgc ttgagcgggc ccgggatttt gccggcatcg
     1021 ctcgtgctcg cgatcatgat tctccccacg gtgacggccg tctcgcgcga ggcgatggca
     1081 gcggtgcccc ctcgcctagc ggccgccgct tacggcctcg gcgcgacgcg ctgggaggtc
     1141 atttttcggg tcacgctgcc cactgcggcc ggcggcattt tcggcgcgct cgtgctcggt
     1201 ctcgggcggg ccttcggcga aaccatggcg ctcgccatgc tcgcggggaa cgcgcagacg
     1261 ttcagctggt cactgttctc gccgggtaac acgctggcag cgttactcgc caaccacttt
     1321 ccggaagcgg gcgagctcga ggtcggcgcg ctcatgtacg ccgcgctcgt cctgcttttc
     1381 atcacgctcg ccgtcaacgt tctgggctcg ctcatcatgc tgcgcgccag gtccggcctg
     1441 aagggactgc gctgatgctc ggacaagctg cctcgcgagc agaagcgccg tcgccgctgc
     1501 atttctcgct gaagaacgcc cgaacgctcg gcgaccgcct gctcacctgg ttcgctctgc
     1561 tcgtgagcgt gatcgcgctg ttcccactct tctcggtgct ctacatgttg ctcgtgcggg
     1621 gcgggcagct gctttcgccg accctgttca gcgagctcac accgggagcc ggcatggaag
     1681 gcggcggcat cggcaacgcc gtactcggca cgctcgtcgt agtcgccgt
//
LOCUS       DATIML010000335         2172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_357677, whole genome shotgun sequence.
ACCESSION   DATIML010000335 DATIML010000000
VERSION     DATIML010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357677"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..1318
                     /locus_tag="VLJ38_05785"
     CDS             221..1318
                     /locus_tag="VLJ38_05785"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HSU39055.1"
                     /translation="MTLAGMPLVTVDARMWRSTGIGSYLRGLLPRVVTRLERARFCLL
                     GDPAELGREAVTQQARVSVRSLSARIYGPSEQPALLWRTPRETRVFWAPHVNAPLAGP
                     GRLVVTVHDAFYAHPPAGAAPRWDKALYLSAMLRGVRRRAEAVLCVSAFTRDELERYV
                     GHFAAPLEVVPNGLERAWFERPAGLAPLAGPYLLFVGNLKPHKNLARTLAAFASIAER
                     VPHVFVVVGPGDGSALARGLSPSVAARVRFAGAVGDAELKCYVAHAAGLVLASLYEGF
                     GLPPLEAMALGVPVLVSRAASLPEVCGEAALYCDPDSVPDIARGLVTLLTDDVERARL
                     MAAGPAQARRFDWERCADATSAVIARLLDAK"
     gene            complement(1609..>2172)
                     /locus_tag="VLJ38_05790"
     CDS             complement(1609..>2172)
                     /locus_tag="VLJ38_05790"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39056.1"
                     /translation="LTIARLVERKGIDSVLRALGAVRRTVPNVCYVVAGDGPERERLG
                     ALARELELDDNVRFVGPVTDAELPLWYALADVFVMPSRSEPPDVEGFGIVFLEASACE
                     RPVVAARAGGVPDAVADGISGFLVTPGDTGELAAKLSELLLDPPRAAELGRRGRQRVL
                     AELNWDAVTERTLQALAGANAPARQDM"
BASE COUNT          288 a          710 c          809 g          365 t
ORIGIN      
        1 cggcgcgacg ccgtcgtttt cccagccgtg cgagccgggt aaatcccagc cgaacgtcac
       61 gagctcggaa gccgcgaacg cgagcgcgat cagcgccacg gtcggatcct cggcgatgac
      121 cttccggacg ggactcacga gccacgatcc gaggcgacca gcgcgcgaca agcgcgccga
      181 gacctagcac gagactcggc cctgccgcta tcgtgcgcgg gtgactctcg ccggaatgcc
      241 gctcgtgacg gtggacgcgc gcatgtggcg ctcgaccggc atcgggtcat acctgcgtgg
      301 gctcttgccg cgtgtggtga ctcggctcga gcgcgcgcgt ttctgcctgc tcggcgatcc
      361 ggccgagctt gggcgtgagg ccgtgacgca gcaagcgcgc gtcagtgtgc gctcgctgag
      421 cgcgaggatt tacgggccga gcgagcagcc ggcgctgctt tggcgtacgc cgcgcgaaac
      481 gcgcgtgttc tgggcgccgc acgtgaatgc gccgctggcc gggccgggcc gcctcgtcgt
      541 gaccgtgcac gatgcgtttt acgcgcatcc gccggccggg gcggcgccgc gctgggacaa
      601 ggcgctctac ttgtcggcga tgcttcgtgg cgtgcggcgc cgggccgaag ccgtgctgtg
      661 tgtgtcggcg ttcacgcgcg acgagctcga gcgctacgtc ggtcacttcg cggcgccgct
      721 cgaggtcgtg ccgaacgggc tcgagcgggc atggttcgag cgacccgcgg ggctggcgcc
      781 gctcgctggg ccttaccttt tgttcgtcgg taatttgaag ccgcacaaga acttggcgcg
      841 gacgctcgcg gcgttcgcga gcatcgccga gcgggtgccg cacgttttcg tggtcgtggg
      901 accgggtgac ggcagcgcgc tcgcgcgcgg gctctcgcca agcgtggcgg cgcgcgtgcg
      961 gtttgccggg gcggtcggcg acgcggagct caaatgctat gtcgcacacg cggcggggct
     1021 cgtgctggcg tcgctttacg aagggttcgg tttgcccccg ctcgaagcga tggcgctcgg
     1081 cgtgccggtg ctcgtgtcgc gagcggcctc gttgccggag gtgtgcggcg aggcggcgct
     1141 ttattgcgac cccgattcgg tgcccgacat cgcgcgcggg ctcgtcacgt tgctcacgga
     1201 cgacgtggag cgcgcccgac tcatggctgc gggtcccgcg caggcgcgaa ggttcgattg
     1261 ggaacgctgc gcggacgcga cgagtgccgt catcgcgcgg cttttggacg cgaaataagc
     1321 cgcacggcgg cagcggctcg cggtcgacgt ggcggcgtgc aggctggaac ggtgcgaaat
     1381 ttcgggttca cgtccagtga accggcggtc gccgacaaat cctctcaagg tcttcgagaa
     1441 ccgttcgcat ggctgaatgg ggcgaggctt tctgagctgc tgtccgcaga atctcgaccg
     1501 cgagggccgg cgatccgagc gagccttagg ccgtccgcgt ccggcctcgc cggcaagtca
     1561 cgttgggttg tcgccgctcg cgccgatcgt gatcttttct tccaagactc acatgtcttg
     1621 tcgcgctggg gcattcgccc cagcgagtgc ttgcagtgtt cgctccgtga ccgcgtccca
     1681 gttgagctcc gcgagcacgc gttgccgacc gcggcggccg agctcggcgg cgcgcggcgg
     1741 gtcgagcaag agctcgctga gcttcgcggc gagctcgcca gtgtctccgg gcgtgacgag
     1801 gaagccggaa atgccgtcgg ccaccgcgtc gggcacgccg ccggcgcgcg cggcgacgac
     1861 gggtcgctcg cacgcgctcg cctcgaggaa gacgatgccg aacccttcga cgtccggtgg
     1921 ctcgctgcgt gacggcatga cgaagacgtc ggcgagcgcg taccagagcg gtaattctgc
     1981 gtccgtgacg ggccccacga agcgaacgtt gtcgtcgagc tctagttcgc gcgcgagggc
     2041 tccgaggcgt tcgcgctccg ggccgtcgcc ggcgacgacg tagcaaacgt tcggtacggt
     2101 acgccgtacg gcgccgagcg cgcggagcac gctgtcgatg cccttgcgtt cgacgaggcg
     2161 cgcgatcgtg ag
//
LOCUS       DATIML010000336         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2666734, whole genome shotgun sequence.
ACCESSION   DATIML010000336 DATIML010000000
VERSION     DATIML010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2666734"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VLJ38_05795"
     CDS             complement(<1..398)
                     /locus_tag="VLJ38_05795"
                     /inference="COORDINATES: protein motif:HMM:NF020243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU39057.1"
                     /translation="MTLTVLLTGAAGFIGSHAAVALAARGDRVIGLDNFNSYYDPRRK
                     RANVAEIAAQAPAADFRLIEGDLRDKPLIERLFAEHRFDVVVHLAAMAGVRPSIERPA
                     YYARVNIEGTANLLQAAVDHGVKKFLFASSS"
     gene            complement(425..1234)
                     /locus_tag="VLJ38_05800"
     CDS             complement(425..1234)
                     /locus_tag="VLJ38_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU39058.1"
                     /translation="MSAEPPPPHIVVEGLAKRFGNFQALIDVDMTIRKGEITVIIGGS
                     GAGKTTLLKILIGLDRPTSGSIRVNDVDIAKLSERELTQVRRRFGMVFQYSALLDSMN
                     VMDNVAFPLREHTKLAEREIREKVLEKLSVLGLTDIEERFPSQLSGGMRKRVGLARAL
                     MLEPEAVLYDEPTSGLDPITSRKVDDLIVETRERFGVTSIVISHDMGGALRIADQIVL
                     LSEGRVVAAGTPRELVASGAELLKEFIESSGIQVDKLLAERDSMAPGRDKD"
     gene            1353..>1600
                     /locus_tag="VLJ38_05805"
     CDS             1353..>1600
                     /locus_tag="VLJ38_05805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39059.1"
                     /translation="MTHEHLAALIAAGEAKKSSDGWMALPEGRSLTLYAAAGQSTLTI
                     SRVQAVRHDGALLYARTIKSELFILALEDVFAGSLDAPA"
BASE COUNT          272 a          515 c          541 g          272 t
ORIGIN      
        1 gaactggagg caaagaggaa tttcttgacg ccatgatcga cggccgcctg cagcaggttg
       61 gcggtgccct cgatgttgac gcgggcataa taggcggggc gttcgatgga ggggcgcacg
      121 ccggccatgg cggcgaggtg cacgactacg tcgaagcgat gctcggcaaa caggcgttcg
      181 atgagcggct tgtctcgcag atcgccttcg atgagtcgaa agtcggcggc gggcgcctgc
      241 gccgcgattt cggcgacgtt cgcgcgtttc ctccgagggt cgtagtagga gttgaagttg
      301 tcgagtccga tcacgcggtc gccgcgagcc gcgagcgcga cggccgcgtg gctaccgatg
      361 aagccagcgg cgccggtgag gagaacggtg agcgtcaaac caggaccctt cttcggcagg
      421 gactctagtc tttgtcacgc ccgggagcca tcgagtcgcg ctcggcgagc agcttgtcca
      481 cctggatgcc gctcgactcg atgaactctt tcaagagctc ggccccgctc gcgacgagct
      541 cgcgcggcgt gccagccgca accacgcgtc cctcggaaag cagcacgatt tggtccgcga
      601 tcctgagcgc cccgcccatg tcgtgcgaaa tcacgatgct cgtcacgccg aagcgctcgc
      661 gcgtctcgac gatgagatcg tcgactttgc gactcgtgat cggatcgaga ccgctcgtgg
      721 gctcgtcgta gagcacggct tcgggttcca gcatgagcgc gcgcgcgagc cccacgcgct
      781 tgcgcatacc gcccgacagc tggctcggga agcgctcctc gatgtccgtg agcccgagca
      841 ccgacagttt ttcgagcacc ttctcgcgga tctcgcgctc ggcgagcttg gtgtgctcgc
      901 ggagcgggaa ggcaacgttg tccatgacgt tcatcgagtc gagcagggcc gaatattgaa
      961 agaccatgcc gaagcggcgc cggacctgcg tgagctcccg ttccgagagc ttcgcgatgt
     1021 ctacgtcgtt gacgcggatg ctgccgctcg tcgggcgatc gaggccgatg aggatcttga
     1081 gcagcgtcgt cttgccggcg cccgagccgc cgatgatgac ggtgatctcc cccttccgga
     1141 tcgtcatgtc gacgtcgatc agcgcctgaa agttgccgaa gcgcttggcc aggccttcga
     1201 cgacgatgtg tggcgggggc ggctcggctg acaccagaac gagcgaagcc tagccgaggg
     1261 agcgcacccg gcgaagcagc gcgcgcggcc gagcggccgg caggaacgcc tcggcgcttg
     1321 acgccggcca cgggagtcga aagctttcgc ccatgaccca cgaacacctg gcagcactga
     1381 tcgccgccgg cgaggcgaag aagagctcgg acggctggat ggcgttgccc gagggtcgct
     1441 ccctcaccct ttacgccgcc gcaggccaat ccacgttgac gatctcgcgc gtgcaggccg
     1501 tacgtcacga cggcgcgctc ctgtatgccc gcaccatcaa gagcgagctg ttcattctcg
     1561 cgctcgaaga cgtcttcgcc ggcagcctcg atgcgccggc
//
LOCUS       DATIML010000337         3852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4398932, whole genome shotgun sequence.
ACCESSION   DATIML010000337 DATIML010000000
VERSION     DATIML010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3852
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4398932"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..1523
                     /locus_tag="VLJ38_05810"
     CDS             138..1523
                     /locus_tag="VLJ38_05810"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HSU39060.1"
                     /translation="MTGRALAELVSARTGIELTRGGIDRALGAYATRRERELALTPSA
                     FVTLLAGERGGAELERLVNSITVGYTWFFRDPGQLAAIESLLTGELGRPGKVRLWIPG
                     CSTGEDAYSLAFIAEHVGREVEILATDVNTQSLEHARRGLYGAWSVRDMDPRFTAGLT
                     RRGERSYELSPSLRGRVSFARHNLIERPPLPSDAATWDVVLCRNVLIYFERDVALRVL
                     DMLARSLAPGGYLVLGASEVMCEVPEGLEACYVAGRLAFRRADPTSEARAKSGTRSSG
                     TFARDWLLAPVTPAQPTRLVSVFPAAAEALRDSVPPEPQPSVAAPSEIERELSAGHRL
                     IEAGDVAGARLRYVAALGHDTTRADAHLYAGVARYLCGEVEPALHNLRAALFLDETLW
                     PAAFYLALCHENSGHPGEALQAYEHVLRIHDAQHVTHRFESVFDAWREDLCAVARRRV
                     QAANAVARRAG"
     gene            1582..2586
                     /locus_tag="VLJ38_05815"
     CDS             1582..2586
                     /locus_tag="VLJ38_05815"
                     /inference="COORDINATES: protein motif:HMM:NF024260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSU39061.1"
                     /translation="MVELHSSSLEAAPESRVQEALVREGMRCLMLSGSVFLRAHLSAP
                     WAYESPTAHEMNAMLAAKGDRIIVFHVITQGRCRIELSDGRAAEELEAGDIAILPFCD
                     QHRMGDPRIERAVPMCDILPEPLVTPVLSWGGGGAVMSMLCGYLRCDDLPLNPVLASL
                     PPLIRVATAGGPLGNWIQASIQYAIHTLARQPIHDPLLQRLPELLFTECLCSFAAKRA
                     AGQHRGWLAGLSDPVVGRALGCMHREPERPWTLKELAREVASSRSVLDARFRELLGRA
                     PMSYLTAFRLQLASRRLRTTQDSMVEVANAVGYGSEAAFSRAFKRHVGKSPSAWRSAG
                     "
     gene            complement(2594..3529)
                     /locus_tag="VLJ38_05820"
     CDS             complement(2594..3529)
                     /locus_tag="VLJ38_05820"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSU39062.1"
                     /translation="MDWALILGSDTPEPAMLESKAPEELGSLIAAFDELSRTDDVDSM
                     LRGAVEIALERIGLQRVGLFLLDAPRNLMLGTWGTDLERNIVDEHHVMYDFGDNDKEC
                     FRRAAQGVPFTIIENCPIVLQLPAETRVVGRSWVASTPIRSARAAMGMMFNDSGTSGE
                     PPDPSKQARAAILCSLLGTVLDLSHGQAAQARGSRSPTGHPLVRQTVRLLTKDPSLGG
                     KDLAAELDISLSRLARVFKIEMGMSLVEYRNRLRLERFQVLLDAGGENLLAAALAAGF
                     GSYAQFHRVFRALRGTTPRAYLRERGHWARRHSRT"
BASE COUNT          598 a         1326 c         1299 g          629 t
ORIGIN      
        1 gacgaagcga gctcgggcgt cttcggcatg ccgcgcgccg cgctcgaagc gcacgccgcc
       61 gaacgcgcgc tgaacccggc cgagctctcg cgtgagctca ccaaatgggc cgtggagacc
      121 gcgcgaggtc tcggacaatg accgggcgag ccctcgccga gctcgtgtcc gcgcgaacgg
      181 gcatcgagct cacccgcggc gggatcgacc gcgcgctcgg cgcctacgca acgcgccgcg
      241 aacgcgagct cgctctgaca ccgagcgctt tcgtcacgct gctcgccggt gagcgggggg
      301 gcgccgagct cgagcggctc gtgaactcga tcacggtcgg ttacacctgg ttttttcgtg
      361 atcccggcca gctcgccgcc atcgagtcgc tcctcaccgg cgagctcggc cggcctggca
      421 aggtgcgact ctggatcccc ggctgctcga cgggagaaga cgcgtattcg ctcgcgttca
      481 tcgccgagca cgtcggccgg gaggtcgaga tcctcgcgac cgacgtgaac acacaatcgc
      541 tcgagcacgc ccgacgcggc ctgtacggcg cctggagcgt gcgcgacatg gatccgcgct
      601 tcacggcagg gctcacccgt cgaggcgaac gcagctacga gctctcgccg agcttgcgcg
      661 gccgcgtcag cttcgcgcgc cacaatctga tcgagcggcc gccgctaccg agcgacgccg
      721 cgacttggga cgtcgtgctc tgcaggaacg tgctgatcta tttcgagcgc gacgtggccc
      781 tccgcgtgct cgacatgctc gcgcgatcac ttgcgccggg cggctatctc gtgctcggcg
      841 cgagtgaagt catgtgcgag gtgccggaag ggctcgaagc ctgttacgtc gcgggccggc
      901 tcgcgttccg gcgcgccgat cccacgtcgg aagcacgcgc gaagagcggc acccggagct
      961 cgggtacttt tgcgcgcgat tggctgctcg ctcccgtcac gcccgcgcag ccgacgcgcc
     1021 tcgtctccgt gtttcccgcg gcggccgagg cgctacggga cagcgtcccc cccgagccgc
     1081 aaccgtccgt ggctgcgccg agcgagatcg agcgcgagct ttcggccgga catcggctga
     1141 tcgaagcggg cgacgtggcc ggcgcgcggc tccggtacgt ggcagcgctc ggccacgaca
     1201 cgacgcgcgc cgacgcccac ctttacgccg gtgtcgcccg ctacctctgc ggcgaggtgg
     1261 aacccgcttt gcacaacttg cgcgctgcgc tctttctcga cgagaccttg tggcccgccg
     1321 ccttctacct cgcgctctgc cacgaaaaca gcggccatcc cggcgaagcc ctgcaagcgt
     1381 acgagcacgt gctccgtatt cacgacgcgc agcacgtcac gcataggttc gaatcggtgt
     1441 tcgacgcctg gcgcgaggat ttgtgcgcgg tcgcgcgccg gcgcgtccag gccgcgaacg
     1501 ccgtcgcacg tcgggcgggc tgatcagggc gctcgagcgc tgaccctggc gggcaggcgc
     1561 tttctcgcgt agaaaccccg cgtggtagag cttcactcga gctcgctcga ggccgcgccc
     1621 gagtcgcgcg tccaggaggc gctcgtgcgc gaaggcatgc gctgtttgat gctctcgggc
     1681 tcggtgttcc tgcgcgcgca cttatcggcc ccctgggcct atgaatcgcc gacggcccac
     1741 gagatgaacg cgatgctcgc ggccaagggt gaccgcatca tcgtgtttca cgtcatcacg
     1801 caaggacgct gtcgtatcga gttgtcggac ggtcgcgccg ccgaggagct cgaagccggc
     1861 gacatcgcga tcctgccgtt ttgtgatcag caccggatgg gcgatccgcg catcgagcgc
     1921 gccgtgccga tgtgcgacat cttgccggag ccgctcgtga cgccggtgtt gagttggggc
     1981 ggcggcggag ccgtgatgag tatgctgtgc ggctacttgc gctgtgacga tctgccgctc
     2041 aatcccgtgc tcgcgtcact gccgccgctc atccgtgtcg cgacggcggg cggtccgctc
     2101 ggcaattgga tccaggcgag cattcagtac gcgattcaca cgctcgcccg acagcccatc
     2161 cacgacccat tgctacagcg cctgcccgag ctcttgttca cggagtgcct gtgcagtttc
     2221 gcggccaaac gcgcagcggg tcaacatcgc ggctggctcg ccgggctgtc cgatccggtg
     2281 gtcgggcgcg cgctcggctg catgcatcgc gagcccgagc gtccctggac cctgaaagag
     2341 ctcgcacgtg aggtcgcgag ctctcggtcc gtgctcgacg cgcgcttccg cgagctcctc
     2401 ggtcgcgcgc ccatgagcta tctgacggct ttccggctgc agctcgcgtc gcgccgcctg
     2461 cgcaccaccc aggacagcat ggtcgaagtc gcgaacgccg tcggctacgg gtcggaagcg
     2521 gcgttcagtc gcgcgttcaa gcgccacgtc ggaaaatcgc cgagcgcgtg gcgcagcgcg
     2581 ggctgacgcg acgttacgtc cgcgagtggc gccgcgccca gtgaccgcgt tcgcgcaagt
     2641 acgcgcgcgg cgtcgtgccg cgcagagcgc gaaagacgcg gtgaaattgc gcgtagctcc
     2701 cgaaacctgc cgctagcgcc gcggcgagca aattctctcc gcccgcatcg aggagcactt
     2761 ggaagcgctc gagccgcagc cgatttcgat actcgacgag cgacatgccc atctcgatct
     2821 tgaagacgcg cgcgaggcgg ctcaggctga tgtcgagctc ggcggcgaga tccttgccgc
     2881 cgagcgacgg atccttcgtg agtagccgca ccgtctgccg cacgagcggg tgaccggtcg
     2941 gcgaacgcga gcctcgcgcc tgcgcagctt ggccatgact taggtcgagc accgtgccga
     3001 gcagcgagca gaggatcgcg gctcgcgcct gcttcgacgg atcgggcggc tcgccggagg
     3061 tgccggaatc gttgaacatc atgcccatgg ccgcgcgtgc ggaacgaatg ggagtggacg
     3121 cgacccagct ccggccgacg acgcgcgtct ccgcggggag ttgcagcacg atcggacaat
     3181 tttcgatgat cgtaaacggg acgccctggg ccgcgcgacg gaagcactct ttgtcgttgt
     3241 ccccgaagtc gtacatgacg tggtgctcgt cgacgatgtt gcgctcgagg tcggtgcccc
     3301 aggtgccgag catcagattt cgcggtgcgt cgagtaaaaa gaggccgacg cgctgcaacc
     3361 caatccgctc gagcgcgatc tccaccgccc cacgcaacat cgagtccacg tcgtcagtgc
     3421 gcgaaagctc gtcgaaagcc gcaatcagcg acccgagctc ctcgggtgct ttgctttcca
     3481 gcatcgccgg ctcgggggtg tccgagccga gaatcaacgc ccaatccacg cgtcttcgca
     3541 cagccacgag ccggcgcgat ccgtaccatg gcgcggcagg aacggtgccg gacacagctt
     3601 ccgtcgcggg ccagggcgcg ggaacgacac tttcgaccat actgggcgga ctcgcgcccg
     3661 gtttcggggg cgtcgtgtcg aatggcgccg aagcgccaag tactgcttcg ggtgcgggga
     3721 gagccaacga gatcagcatt cccgcaaagg ggtcacttgg atcccatttt tgcgaatctc
     3781 atttcaaggg ctccggacag tgcgcggcag gggcgtcccc ggccggcgcg tcccacggaa
     3841 atttcgtaac ct
//
LOCUS       DATIML010000338         1847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2377589, whole genome shotgun sequence.
ACCESSION   DATIML010000338 DATIML010000000
VERSION     DATIML010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2377589"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..876)
                     /locus_tag="VLJ38_05825"
     CDS             complement(82..876)
                     /locus_tag="VLJ38_05825"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HSU39063.1"
                     /translation="MNTPAADAPRLRALVVEDEWPARNYLVELLEGTGAAQVVGAVGH
                     ADEARRILSEGRDRLAIDVAFVDIELAEQSSRAGLELARELLGTPRAPLFVFATAHEQ
                     HAVEAFELGAADYLLKPFTEERVEHCTERLRARFSGRAPANSTARIVARRGNGLVFLD
                     RDEVWAFEASERLTFVHTPHGTFDLELSLSAIESSFGEVLKRVHRSWLVHTAQVRELV
                     REGSDTRIFVGAGLGGERSGIWVPVARERAAHVRAWLLADTRGLKR"
     gene            complement(873..>1847)
                     /locus_tag="VLJ38_05830"
     CDS             complement(873..>1847)
                     /locus_tag="VLJ38_05830"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HSU39064.1"
                     /translation="RFLVVPTKVRTASYAFLWGLEIPVTLTLLSLAHRFTLRRRFGAL
                     GTLLTTVGVAGVSGVLFGVALTLLAQHYPAFRHPERAPSLLRGVAFGLIFGQLHAGLW
                     AMAFVYPFAAEDARLRALEAERLRAAIEAAQLRAHLEPHFLLNTLNAIAGLVTEDPRE
                     ARRLIGCLGDLLRDAARPGHELQTIDQELQWLDRYVAILHARHRDALRFRWEIAPEAR
                     PLLLPRLLLQPLVENAVKHGALKRADGGEVVVRVEIVTSGSEPLIVCTVEDNGPGLGE
                     PRVGSLGLHVVRRRLELNHPGAALRLESSERGTRSIVELPLVHAEASS"
BASE COUNT          313 a          656 c          641 g          237 t
ORIGIN      
        1 accgcgcaaa tccgaccaaa tgccgccggc atgccacgag cccgtgctcg ccgccgacga
       61 gccgacctgt gtcgattctg ctcagcgctt caggccacgc gtatcggcaa gcaaccacgc
      121 gcggacgtgg gcggcgcgtt cccgtgccac cggaacccaa atgccggacc gctcgccgcc
      181 gaggccggcg cccacgaaaa tgcgggtatc gctgccctcc cgcacgagct cgcggacctg
      241 cgccgtgtgg acgagccagc tccggtgcac gcgcttgagc acctccccga agctcgactc
      301 gatcgccgaa agcgaaagct cgaggtcgaa ggtgccgtgc ggcgtgtgca cgaaggtcag
      361 gcgctccgag gcttcgaagg cccagacctc gtcgcgatcc aaaaatacga gaccgttgcc
      421 gcggcgggcc acgatgcgcg ccgtcgaatt ggcgggtgct cgcccggaaa agcgcgcgcg
      481 caagcgctcg gtgcaatgct cgacgcgctc ttcggtgaac ggcttgagta aatagtcggc
      541 ggcgccgagc tcgaaggcct cgacggcgtg ctgttcgtgc gccgtcgcga aaacgaagag
      601 cggcgcgcgc ggcgtaccga ggagctcccg cgcgagctcg agcccggccc gggagctctg
      661 ctcggcgagc tcgatgtcga cgaacgccac gtcgatggcg agccggtcgc gcccttcgct
      721 caagatgcgc cgcgcctcgt cggcgtggcc gacggcgccc acgacctgag ccgcgcccgt
      781 gccctcgagc agctcgacga ggtagttgcg cgccggccac tcgtcctcga cgacgagcgc
      841 gcgcaggcgc ggggcgtcgg cggccggcgt gttcacgagg acgcctccgc gtgcacgagc
      901 ggcagctcga cgatggagcg cgtgccgcgc tcggaggact cgagccggag cgccgcgccc
      961 ggatgattca gctcgagacg gcggcggacg acgtgcaaac cgagcgagcc cacgcgcggt
     1021 tcgccgagcc caggcccgtt gtcttccacg gtgcacacga tgagcggctc gctgccgctc
     1081 gtgacgattt cgacgcgcac cacgacctcg ccaccgtcag cgcgcttgag cgcgccgtgt
     1141 ttgacggcat tttcgaccag cggttgcagg agcaaccgcg gcaagagcag agggcgcgcc
     1201 tcgggcgcga tctcccaacg aaagcgcagc gcatcgcggt gacgcgcgtg caggatcgcg
     1261 acgtagcgat cgagccactg cagctcctga tcgatcgtct gcagctcgtg gccgggccgc
     1321 gccgcgtcac gcaacagatc gcccaggcaa ccgatgagtc gccgcgcctc gcgcggatcc
     1381 tcggtgacga gccccgcgat ggcgttcagc gtgttgagca agaaatgcgg ctcgaggtgc
     1441 gcccgcagtt gcgccgcttc gatcgcggcg cgcagccgtt ccgcctcgag cgcccgcaag
     1501 cgcgcatcct cggctgcgaa cgggtagacg aacgccatcg cccagagtcc cgcgtgcagt
     1561 tgtccgaaga tgagcccgaa cgcgacgccg cgcagcagcg acggcgctcg ctccggatgc
     1621 cggaacgccg ggtagtgctg cgcgagcaac gtgagcgcca cgccgaagag cacgccgctc
     1681 acgcccgcca cgcccacggt cgtgagcagc gtgccgagcg cgccgaagcg ccgcctgagc
     1741 gtgaagcgat gcgccaggct caagagcgtg agcgtcaccg ggatttcgag cccccaaagg
     1801 aacgcgtagg aagcggtgcg cactttcgtc ggcacgacga gaaagcg
//
LOCUS       DATIML010000339         2088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4399219, whole genome shotgun sequence.
ACCESSION   DATIML010000339 DATIML010000000
VERSION     DATIML010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4399219"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1498)
                     /locus_tag="VLJ38_05835"
     CDS             complement(<1..1498)
                     /locus_tag="VLJ38_05835"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39065.1"
                     /translation="MVKSASDAHEPAATARPVRTTSRAFSLNPSAAAMRVGRYRVLSE
                     LGRGGMANVYLAVAQGPGGVNKLVVLKALLPELASEPESLTMFLDEARLAAQLNHPNV
                     VQTYEVGTEGDRHVMVMEYLEGQSLSAIVKRGELVGKPMTLKLQLRVIMSALEGLGYA
                     HELSAYDGTPLELVHRDISPQNVFVTYDGQVKVLDFGIAKAASSSTETATGVIKGKLA
                     YMAPEQIVANGIDQRADLYSIGCMLWAAATGRKLWKDTPDVQIMRRVMQGDVPTPQSA
                     HPGCDDELNHIVMKALAWQRENRYQTAHELQQDLDAYCDRYSGEAKQKDLAAYVSTLF
                     RETRAEIKALVERRLTLAATEESVSAPATMVVSQVLEVSARSAPRAERDSWLPTAVAE
                     TPAGKRSRRGALVLGALAALALAGALVLSPRLSGRQPSFPQAGGQALTQSPAVPEMAR
                     AKVDDPHVSEPAMIIRRDEPVPAEAHPAPSESRAPARRKPVFTRPVIAP"
     gene            complement(1643..>2088)
                     /locus_tag="VLJ38_05840"
     CDS             complement(1643..>2088)
                     /locus_tag="VLJ38_05840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39066.1"
                     /translation="LGEPRLGRVEPRLFVDQAPQQLDGVLAVDGEAKRAWDDVKGAVM
                     ASAISRMITRVVAGYAAGAAAKGATKDEGIGMLVALATQATLTAVDTPDTRSWETLPA
                     RIAIGRVRLPPGAHTVSMSANGGQTQKKLTLATNGFAATALTVLR"
BASE COUNT          292 a          708 c          719 g          369 t
ORIGIN      
        1 tcggcgcgat aacgggccgc gtgaacaccg gttttcgtct ggctggagcg cgcgactcgc
       61 ttggcgcggg gtgcgcttcc gccggcaccg gctcatcacg gcggatgatc atggccggct
      121 cgctgacgtg aggatcatcg actttcgctc gcgccatttc gggtaccgct gggctctgcg
      181 tcaacgcttg gccgcccgcc tgcgggaagc ttggctgtcg gccggagagc cgcggtgaga
      241 gcacgagggc gccggcgagc gcgagggccg ccaacgcgcc gagcacgagc gctccgcgtc
      301 gcgaacgctt gccggccgga gtctcggcga ctgccgtcgg gagccagctg tcgcgttcgg
      361 cgcgaggcgc ggagcgagcg ctcacctcga gcacctgaga gacgaccatc gtcgcgggcg
      421 cgctcacgct ctcttcggtc gcggcgagcg tcagccgtcg ctcgacgagc gctttgatct
      481 cggcgcgcgt ctcgcgaaag agcgtcgaga cgtacgcggc gaggtccttt tgcttggcct
      541 cgcccgaata acggtcgcag taggcgtcga ggtcttgctg gagctcgtgc gccgtctgat
      601 agcgattctc gcgttgccac gcgagagcct tcatcacgat gtgattgagc tcgtcgtcgc
      661 agcccgggtg cgccgattgc ggcgtcggca cgtcgccctg catcacgcgg cgcatgattt
      721 gaacgtcagg cgtgtccttc cacagcttgc ggcccgtggc ggccgcccag agcatgcagc
      781 cgatcgaata gagatcggcg cgctgatcga tgccgttggc gacgatctgt tcgggcgcca
      841 tgtacgcgag cttgcccttg atgacgcccg tcgcggtctc cgtcgaagag gacgccgcct
      901 tggcgatgcc gaagtcgagc accttgacct ggccgtcgta ggtgacgaac acgttctgcg
      961 gtgagatgtc gcgatgcacg agctcgagcg gcgtgccgtc gtaggcggac agctcatggg
     1021 cgtagccgag cccttcgagc gcgctcatga tcacacgcag ctggagcttc agcgtcatcg
     1081 gcttaccgac gagctcgccg cgcttgacga tggcggacag cgattgtccc tcgaggtact
     1141 ccatcaccat gacgtgacga tcgccctccg tgccgacttc gtacgtctgc acgacgttcg
     1201 gatggttcag ctgcgccgcg agccgcgcct cgtcgaggaa catcgtgagc gactcgggtt
     1261 cgctcgccag ctcgggcagg agtgctttca gcacgacgag cttgttcacg ccgcccggtc
     1321 cctgcgcgac ggcgagatag acgttggcca tgccgccgcg gccgagctcg gacagcacgc
     1381 gatacctgcc gacgcgcatg gcagccgcgc tcgggttcaa gctgaaggcc cgcgacgtcg
     1441 tgcggacagg ccgcgccgtg gcggcgggct cgtgagcgtc cgatgcggac ttcaccatcc
     1501 tctcaactta gcatcgcttg cgcatcattt ctgctgcgag cgacgcaatg cacgcacttt
     1561 ggtgggtgct attcgtcgct cgtaggtcaa gcgccggagt tcgcgctgcc catccgaccg
     1621 tgtgcgccac ggtgcgcgcg cgtcagcgca gcacggtgag cgccgtcgcg gcaaaaccgt
     1681 tcgtggcgag cgtcagtttc ttttgggtct gtccgccgtt cgcactcatg ctcaccgtgt
     1741 gcgcaccggg cggcaggcgc acgcggccga tcgcgatgcg cgccggcagc gtctcccagc
     1801 tgcgcgtgtc gggcgtgtcg accgcggtga gcgtcgcctg cgtcgcgagc gcgacgagca
     1861 tgccgatgcc ttcgtccttg gtcgcgccct tcgcggcggc gcctgcggcg taacccgcga
     1921 cgacgcgcgt gatcatgcgc gagatcgccg aggccatcac ggcccctttc acgtcgtccc
     1981 aggcgcgctt cgcctcgccg tcgaccgcga gcacgccgtc gagctgctgc ggcgcttgat
     2041 cgacgaacaa gcgcggctcg acccgcccga ggcgcggctc gccgagct
//
LOCUS       DATIML010000340         1847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3534277, whole genome shotgun sequence.
ACCESSION   DATIML010000340 DATIML010000000
VERSION     DATIML010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3534277"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="VLJ38_05845"
     CDS             complement(<1..237)
                     /locus_tag="VLJ38_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HSU39067.1"
                     /translation="MGTVVIKAGHVQPVWAGHPWVFAQAVERVEGGAVAGDDVEVKDP
                     RGNSLGRGLYSPGSAIPVRLYTRDRERAVDGALLA"
     gene            381..1187
                     /locus_tag="VLJ38_05850"
     CDS             381..1187
                     /locus_tag="VLJ38_05850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39068.1"
                     /translation="MALRALAVVAGVGLLLLPSVARADCPNGWFCDDEPAEAPPSPPP
                     NAVRAEPREEAPEAPTAPPEEPQAMDLVVPPYDENPPPPPPPWSRDREELGLNFHIAL
                     GVMGSGAQNNALLGGGGFAFRLRPVPVFALDLGLELAGGNDYNGNDRGEYAAVVNAVG
                     FLNPRDRVQCFVLGGFNLGGASVSVRHLGGVAVTPYDDHYAYFGGQLGLGVEWRFTRH
                     TALASDFQMFVRGRIDEGRQILPEYVDPTTHLVSNVSGGGLFRLGVTFYF"
     gene            complement(1280..1591)
                     /locus_tag="VLJ38_05855"
     CDS             complement(1280..1591)
                     /locus_tag="VLJ38_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020464737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HSU39069.1"
                     /translation="MAGKRLTKAQVIAELAGATDLDKKSVSRVFEGLSDLIRKQLSVR
                     GPGEFVVPGLVKLRVVKKPATKERQGINPFTKEPITIPAKPASKKVRATALKALKDLV
                     Q"
BASE COUNT          274 a          668 c          577 g          328 t
ORIGIN      
        1 ggcgaggagc gcgccgtcca cggcgcgttc gcggtcacgc gtgtagagcc gcaccggaat
       61 cgccgagccc ggcgagtaca gcccgcggcc gagcgagttg ccgcgcggat cttttacttc
      121 gacgtcgtcg cccgcaacgg cgccgccctc gacgcgctcg acggcctgcg caaacaccca
      181 ggggtgcccg gcccagaccg gctggacgtg tccggctttg atgacgacgg tgcccatcgc
      241 gcctcacgta ccacggcggg cccgcccgag cgtgctcgcc tcgaccggcc caagcaccgg
      301 cctcgcgggc gttctcgtgg cctgtgtccg cccgcgccgc gcgagatctg ttcctccaag
      361 actgctaccg taacgccggc atggccctgc gtgctctcgc cgtcgtcgcc ggcgtcggac
      421 tgctcctttt gccgagcgtc gcgcgcgccg actgtcccaa cggctggttc tgtgacgacg
      481 agccggccga ggcgccgccg tcgccgccgc cgaacgccgt gcgcgcagag ccgcgcgagg
      541 aagcgcccga agccccgacc gcgccgcccg aagaaccgca agcgatggac ctcgtcgtgc
      601 cgccgtacga cgaaaacccg cctccgcccc cgccgccatg gtcgcgcgac cgcgaagagc
      661 tcggcctgaa cttccacatc gccctcggtg tcatgggctc gggtgcgcag aacaacgctc
      721 tgctcggcgg cggcggcttc gcgtttcgac tgcgccccgt cccggtcttc gcgctcgatc
      781 tcggtctcga gctcgcgggc gggaacgact acaacggcaa cgaccggggc gagtacgcgg
      841 ctgtcgtcaa cgccgtcggc ttcctcaacc cgcgcgatcg tgtgcagtgc ttcgtgctcg
      901 gcgggttcaa cctgggcgga gcgagcgtca gcgtgcgtca cctcggcggc gtcgccgtca
      961 cgccgtacga cgaccactac gcctacttcg gcgggcagct cggcctgggc gtggagtggc
     1021 gcttcacgcg tcacaccgcc ctcgcgagcg attttcaaat gttcgttcgc ggccgcatcg
     1081 acgagggccg tcagatcttg cccgagtacg tcgatccgac cacccacctg gtctcgaacg
     1141 tgtctggcgg cggcctgttc cgcctcggcg tcacgttcta tttctgaacg ccgcgcgacc
     1201 tccgcgcgag tctcgcacaa aacgaaaatc cccggctgcc gcgcgggcga gccggggatc
     1261 gtcgctgccg aagactcgtt tactgaacga gatccttgag cgccttgagc gcggtagcgc
     1321 gcaccttctt gctcgcgggc ttcgccggaa tcgtgatcgg ctccttcgtg aagggattga
     1381 tgccctgacg ctctttcgtc gcgggcttct tcacgacgcg gagcttcacg agccccggca
     1441 ccacgaactc acccgggcca cgcacggaga gctgcttgcg gatgagatcc gaaagccctt
     1501 cgaacacgcg cgatacgctc ttcttgtcga gatccgtcgc gcctgcgagc tcagcaatca
     1561 cctgagcctt cgttagtctt ttgcctgcca tgaagtcctc ctgtacataa atccagtagt
     1621 agtatccgtg tctgaccaac cgtcgcgcgc gctcggcttg ccggttttca tgcgggaccg
     1681 gcgcgcccga ccagacaacg gcacggatac cagggtactc cagggggttt caagagagaa
     1741 aagctcccat tgtccttttt ttacgccggg tgggaacacc ccccattcgc tacagcagcc
     1801 ggcatgccgg tttcgtggtc tcgatcgagc ccttgccggt tttcttg
//
LOCUS       DATIML010000341         5169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4979527, whole genome shotgun sequence.
ACCESSION   DATIML010000341 DATIML010000000
VERSION     DATIML010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5169
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4979527"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(909..982)
                     /locus_tag="VLJ38_05860"
     tRNA            complement(909..982)
                     /locus_tag="VLJ38_05860"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(946..948),aa:Pro,seq:tgg)
     gene            complement(1130..2080)
                     /locus_tag="VLJ38_05865"
     CDS             complement(1130..2080)
                     /locus_tag="VLJ38_05865"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HSU39070.1"
                     /translation="MPLPALHVEGNSIRDPNGNSVILRGVDLIDLGATEQWEGGIKAM
                     IDRLTDPNDAQGSSPGWATRVLRLAVVPGDAGSGTPVGYVPGIQYYERFLRPTVDYAR
                     QKGLYAIIDWHYVSDTAAHAATTTAFWQDIAPHFASDTNVLFELYNEPINSGSWPATK
                     LDMQSWYDTVRAAAPDNLVLIGTPNWSQLVGNAAADPISGTNLVYVAHMYPQHWQSQS
                     LRDQITSAAQTVPVFMTEWGFWTSPMDALLNGSITSYGAPLREFIEANHLSWSAWCAS
                     SSWAPPMFDKTYALRVGEGEMGGFVKDWLYDRRNGDLPTE"
     gene            complement(2393..2767)
                     /locus_tag="VLJ38_05870"
     CDS             complement(2393..2767)
                     /locus_tag="VLJ38_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39071.1"
                     /translation="MPLDKLTTLLVVEAIEPCLPAWEALGYAVAVRVPEAGTLGFVIL
                     KSKLGELMLQTKRSLAEDLPDVAARGPSYLLYADVSSLTEARKTLPAATVIVPCRKTF
                     YGATEAWLDLAGNVILGLAEHD"
     gene            complement(2777..3559)
                     /locus_tag="VLJ38_05875"
     CDS             complement(2777..3559)
                     /locus_tag="VLJ38_05875"
                     /inference="COORDINATES: protein motif:HMM:NF042696.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSU39072.1"
                     /translation="MRDELPPQPVDLAPPPELATRIDAFWQHGGRGAELRVLPDGCMD
                     FWFDLETGQARLIGAMTTAAVVAVPARGRYFGVRFRPGAAAEYVADAVRDFLDGDAPL
                     GDVTRARRSALGERVAEATNHAARVALIADFLLAPSSRVRAPDHRVRRAVRLIQRDRA
                     GAKVRAVAAELGLSERQLERLFDERLGYGPKQFARIMRFERAVALLDAPLRGQAALAA
                     TAGYADEPHLIREFRALAGATPVELARERRVGFVQAGDGPQR"
     gene            complement(3569..3973)
                     /locus_tag="VLJ38_05880"
     CDS             complement(3569..3973)
                     /locus_tag="VLJ38_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39073.1"
                     /translation="MSVEERTPFASERDRPRRRRARFTTELTRILTLAGTVGFAVAIA
                     VALLSGCAGDLKAAVSLKVVRSPETPRDASVIIDEQYIGPLGIVAAHGVRLPVGEHRI
                     SIEKSGFFPFDSLVRADRDDIVLPVKLEPVPD"
     gene            complement(3970..>5169)
                     /gene="guaA"
                     /locus_tag="VLJ38_05885"
     CDS             complement(3970..>5169)
                     /gene="guaA"
                     /locus_tag="VLJ38_05885"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HSU39074.1"
                     /translation="VLGRFKAGEEINVWMSHGDRLTALPKNFRKIAATESSELAAIAD
                     PERRFFAIQFHPEVVHTPRGIEVIQSFLFDVAGLEPSWTPGSFVDEAVAAVTAAVKPD
                     ERVICGLSGGVDSSVAAVLCHKALGDRLVCIFVDNGMLREGEFESVVHTMRSSFHLNL
                     VPVDARERFLRALSGVTDPEQKRKIIGRVFIEVFEEHSHRIENAQFLVQGTLYPDVIE
                     SVSVRGPSAVIKSHHNVGGLPERMKLRLIEPLRELFKDEVRKVGEALGMPQRVLYRQP
                     FPGPGLAVRCLGELTEPRLAVLRRADAIVDEEIRAAGLYDAVWQAFAVLLPVRSVGVM
                     GDDRTYEETCVVRAVTSSDGMTADWARLPHELLARISSRITNEVKGINRVTYDISSKP
                     PATIEWE"
BASE COUNT          827 a         1641 c         1800 g          901 t
ORIGIN      
        1 acccgcggtg ccggcggcga cgtgtcgacc tgcgtgcgct atgctagagt ccgtggccat
       61 ggactggcgc gagcgcatcg tctcagatcc cacgatctgt cacggaaggc cgacgctcaa
      121 gggtacgcgc gtgcttgtga gcgtcgtcct ttcacacctc gcgcacggtg atcgcgcgga
      181 gagcatcatt cgcgagttcc cgagcctcac cgaagacgac gtgcgtgcag tgatcgcctt
      241 cgcggcacag gctgcggcag acgacctccc agcgccttca ccgcgcgcgg ccggcgccgg
      301 tcgacgagga tcaagctcga cgaaaatctg tcgtcgaggc tgaaggcggg cctggctgag
      361 ctcgggcacg acgccgatac cgttcgcgac gaggagctga ccggtaagcc tgatgtcgat
      421 gtctgggcgg ccgcccaggc ggacgaacgc tttctcgtta ctctggacgg agatttcggc
      481 gactcccgac tgtacccgcc cggcacgcac gcgggggtcc tggtcgcgcg cttgccggac
      541 gccgaacagt atcgtgccgc cgagtacgtc ttgagctggt tcgagcggta cgacccagcc
      601 gactgggttg gctgcctggt tgtcgggacg ccggcgcggc tgcgtgttcg acgggcatag
      661 ccagccgcgc gtatccatca gcgtcggtcc gcaggtgtcg cgccgagttg ggacggtagc
      721 aacggttcaa atcctatttg atttgacacg gctgccgggg aacgatcgca gccgaattgg
      781 gccgttctaa gcgacctcgc atcagcaggt tgagctcgaa ttgctcacgc aattgctaat
      841 agcgtggaaa cgacatttct gtcgttcggc taagctcccg ttttcacaag gagctttcga
      901 tgagttagtc ggggtggcag gatttgaacc tgcaacagcc ggcacccaaa gccggccctc
      961 taccaggttg aggtacaccc cgaagggacg cggagcctag cctacgagcc gaggctcctc
     1021 aagccttcag cgttcggccg gcggtgcggc gagatgcggc ctagcgcgac gtacggcgcg
     1081 tcgaaccacg tgtggcgtga tcggttgggt cgtgccgcgt ggggcgtcgt cactcggtcg
     1141 gtaggtcgcc gttccggcga tcgtagagcc aatctttgac gaagccgccc atttcgcctt
     1201 cgcctaccct gagggcatat gttttgtcga acatgggcgg ggcccagctc gagctcgcgc
     1261 accacgcgct ccagctcaga tggttcgctt cgatgaactc tctgagcggc gcgccgtagc
     1321 tcgtgatgct gccgttcagg agggcatcca tgggcgacgt ccagaagccc cactcggtca
     1381 tgaagacggg aacggtttgg gccgcgctcg tgatttggtc cctcagcgac tggctctgcc
     1441 agtgctgcgg gtacatgtga gcgacgtaga cgaggttggt gccggaaatg gggtcagctg
     1501 cggcgttgcc gacgagctgg gaccagttcg gcgtgccaat caagacgagg ttgtcgggtg
     1561 cggcggcgcg gacggtgtcg taccaactct gcatgtccag tttggtcgca ggccagctgc
     1621 cgctgttgat cggttcgttg taaagttcga aaaggacgtt ggtgtcgctc gcaaagtgcg
     1681 gcgcgatgtc ttgccagaac gccgtggtcg tcgccgcgtg cgctgcagtg tcgctgacat
     1741 agtgccagtc gatgatggcg tagaggccct tttgtcgcgc gtaatcgacg gtcgggcgca
     1801 ggaagcgttc gtagtattgg atgccgggca cgtagccgac gggggtgccg gagccggcat
     1861 cgccggggac gacggcgagc cgcaggacgc gagtcgccca gccgggtgag ctgccttgcg
     1921 cgtcgttcgg atccgtcagg cggtcgatca ttgctttgat gccgccttcc cactgttcgg
     1981 tggcgccgag gtcgatgaga tcgacgccac gtaggatcac gctgttgccg ttcgggtctc
     2041 tgatgctgtt gccttcgacg tggagcgccg gtagcggcac gtcgcttgcg ggagcgccgc
     2101 tcgcgccacc gtttccggaa ctggttccag cgcggccggc cgtcgtcgca ccgccgactc
     2161 ccgctgccga gcccccgctg ccgccgcttg ccgttgccga gctgccgcct ctgccggctg
     2221 ccgggacgga ttgaacggcg tcgctgctgc tcgagcaggc gaccaggttc agcacgaatg
     2281 cgaccccgac gaagcgggtc gcgggccgga gaacgggaac tatcgaggac tttggcacat
     2341 cgagcgatat ggccgctagt cgccgggccg atcacgaaat cgtggcgtgg cctcagtcgt
     2401 gctcggcgag accgaggatg acgttgccag cgaggtcgag ccaagcttcc gtcgcgccgt
     2461 aaaaggtctt gcggcagggg acgatgaccg tcgccgccgg gagcgtcttt cttgcttccg
     2521 tcagggacga gacgtcggca taaaggaggt agctcggacc gcgggcggcg acgtccggca
     2581 ggtcctcggc gaggctccgt ttggtttgga gcatgagctc cccgagcttc gatttcagga
     2641 tcacgaagcc gagcgtgcct gcttccggaa cgcgaacggc cacggcgtag ccgagcgctt
     2701 cccacgccgg caggcaaggt tcgatggctt ccacgacgag cagggtggtg agtttgtcga
     2761 gcggcatggg gcgaagctat cgctgcgggc cgtcgccggc ttgaacgaat ccgacacggc
     2821 gttcgcgagc aagctcgacc ggggtggcgc cagcgagcgc gcgaaactca cggatgaggt
     2881 gtggttcgtc tgcgtagcct gccgtggcgg cgagggcggc ttggccgcgg agcggcgcgt
     2941 cgaggagcgc gacggcgcgc tcgaaccgca tgatgcgcgc gaattgtttc ggaccgtatc
     3001 cgagccgttc gtcgaagaga cgctcgagct ggcgctcgga aaggccgagc tcggcggcca
     3061 cggcacgaac cttcgcgccc gctcggtcgc gttggatcaa ccgcacggcg cggcgaaccc
     3121 ggtggtcggg cgcacgcacg cggctcgacg gtgcgagcag gaagtcggcg atgagcgcta
     3181 cgcgggcggc gtggttcgtc gcttccgcca cgcgctcgcc cagcgcgctc cgccgcgcgc
     3241 gcgtcacgtc gccgagcggt gcgtcgccgt ccaggaagtc gcgcacggcg tctgcgacgt
     3301 actccgccgc cgcccccggc cgaaagcgca cgccgaagta acgtccgcgc gcggggaccg
     3361 ctacgacggc cgccgtcgtc atcgccccga tgagccgcgc ctggccggtc tcgaggtcga
     3421 accaaaagtc catgcagccg tccgggagca cgcggagctc ggcaccgcgc ccaccgtgct
     3481 gccaaaaggc atcgatgcgt gtcgcgagct ctgggggtgg cgcgaggtcc accggctggg
     3541 gagggagctc gtcgcgcatg ttctcctctc agtcgggcac gggctcgagc ttgacgggca
     3601 gtacgatgtc gtcgcggtcg gcgcgcacga ggctgtcgaa cgggaaaaat ccgctctttt
     3661 cgatgctgat gcggtgctcg ccgaccggca gccgcacgcc gtgtgcggcc acgatcccga
     3721 gcgggccgat gtactgctcg tcgatgatca ccgacgcgtc gcgcggggtt tcggggctgc
     3781 gcacgacttt gaggctgacg gcggccttga gatcgcccgc gcagccgctc aggagcgcga
     3841 cggcgatcgc caccgcaaat cccaccgtgc cagcgagcgt caaaatgcgc gtgagctcgg
     3901 tcgtgaaacg agcgcggcgg cgccgcggcc ggtcgcgttc ggaagcgaag ggagtacgct
     3961 cttcgacgct cattcccatt cgatggtggc agggggtttg gagctgatgt cgtaggtgac
     4021 gcggttgatg cccttcacct cgttcgtgat acgactcgag atgcgcgcga gcagctcgtg
     4081 cggcaggcgc gcccaatccg ccgtcatgcc gtcgctcgaa gtcacggcgc gcacgacgca
     4141 cgtctcctcg taggtgcgat cgtcgcccat cacgccgacg ctccgcacgg gcaagagcac
     4201 cgcaaatgct tgccagacgg cgtcgtagag ccctgcggcg cgaatttctt catccacgat
     4261 ggcgtccgcg cggcggagga cggccaggcg cggctcggtg agctcgccga ggcagcgcac
     4321 ggcgagcccc ggccccggga acggctgccg atagagcacg cgctgcggca tgccgagcgc
     4381 ttcgcccacc ttgcgcactt cgtctttgaa gagctcgcgt agcggctcga tcagccggag
     4441 cttcatgcgt tccggcaggc cgccgacgtt gtggtggctc ttgatcacgg cgctcggccc
     4501 gcgcacgctg acgctctcga tcacgtcggg ataaagcgtg ccttgtacga ggaattgcgc
     4561 gttttcgatg cgatgcgagt gctcttcgaa tacctcgatg aacacgcgcc cgatgatctt
     4621 gcgcttctgt tccgggtccg tcacgcccga aagcgcccgc aagaagcgtt cgcgagcgtc
     4681 gaccggcacg aggttcagat ggaagctcga gcgcatggtg tgcacgacgc tctcgaactc
     4741 gccttcgcgc agcatgccgt tatcgacgaa aatgcagacg agccggtcgc cgagagcctt
     4801 gtgacacaac accgccgcca cggaggaatc gacgccacca ctcaggccac agatcacgcg
     4861 ttcatccggc ttgaccgctg ccgtgacggc cgccacggcc tcgtcgacga acgagccggg
     4921 cgtccagctc ggttcgagcc cggcgacgtc gaacaagaag gactggatca cctcgatgcc
     4981 gcgcggcgtg tgcacgacct cggggtggaa ttggatcgcg aagaagcgcc gttcgggatc
     5041 cgcgatcgcc gcgagctcgg agctctcggt cgcggcgatc ttgcggaagt ttttggggag
     5101 cgccgtcagg cgatcaccgt ggctcatcca tacgttgatt tcctcgccgg ccttgaagcg
     5161 cccgaggac
//
LOCUS       DATIML010000342         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_935465, whole genome shotgun sequence.
ACCESSION   DATIML010000342 DATIML010000000
VERSION     DATIML010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_935465"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VLJ38_05890"
     CDS             <1..213
                     /locus_tag="VLJ38_05890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39075.1"
                     /translation="LKLIEAADCKYELDGKNDVDEMRELDRRTEEANDHWHDQIADWN
                     REQQKRKRSGRAAGTAREFFDFLGLG"
     gene            220..753
                     /locus_tag="VLJ38_05895"
     CDS             220..753
                     /locus_tag="VLJ38_05895"
                     /inference="COORDINATES: protein motif:HMM:NF025116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSU39076.1"
                     /translation="MDRAESHLVLTAVGPDRPGIVNAISALLHAAGANLEDSRMAILG
                     GEFALLVLVSGSEAAVARVERDAPRLEGELGLKLISKRTQRVSPRNFRPYVVRVSGVD
                     RPGIVRAVTDLFARRAINVASLDSRVTYAPDSGTPLFVLEAALEVPSEVALSELRREV
                     AALSDEENLDVTLESGR"
     gene            850..>1648
                     /gene="hemB"
                     /locus_tag="VLJ38_05900"
     CDS             850..>1648
                     /gene="hemB"
                     /locus_tag="VLJ38_05900"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HSU39077.1"
                     /translation="MLERPRRNRRTAGIRELVRETHLGPEHLVLPLFVQEGQGVATPI
                     ASMPGHARLTVDLLVEKAHEAFALGVPAVEVFPRIPEEQKDARATESTNAAGLVPRAV
                     RALKQALPELTVITDVALDPYSSDGHDGVVIDGRIDNDASLPILAAMAVAQARAGADV
                     VAPSDMMDGRIAAVRRALDEAGFSDVLVCSYCCKYASAFYGPFREALDSAPRGGDKKT
                     YQMDPANVREALREVRLDEAEGADWLMVKPGLPYADVIRRVRELTALP"
BASE COUNT          254 a          598 c          553 g          243 t
ORIGIN      
        1 ctcaagctga tcgaggccgc cgactgcaag tacgagctcg acggcaagaa cgacgtcgac
       61 gaaatgcgcg agctcgaccg gcgcaccgag gaagcgaacg accactggca tgaccagatc
      121 gccgactgga accgcgagca acagaagcgc aagcggagtg ggcgcgccgc cggcacggcc
      181 cgcgagttct tcgatttctt gggtctcggc tgaaccgcca tggaccgcgc ggaaagccat
      241 ctggtgctga cggccgtcgg gcccgatcgg cctggcatcg tcaatgcgat ctcggccttg
      301 ctccacgccg ctggcgcgaa cctcgaggac agccgcatgg cgatcctcgg cggggagttc
      361 gcgctgctcg tcctcgtctc gggcagtgaa gcggccgtcg cacgggtcga gcgcgacgcg
      421 ccgcggctcg aaggcgaact cggcctgaag ctcatctcga aacggacgca gcgcgtctcg
      481 ccgcgcaact tccgtccgta cgtcgtccgg gtctcgggcg tcgatcggcc gggcatcgtg
      541 cgcgccgtca cggatctgtt cgcgcggcgc gccatcaacg tcgcctcgct cgattcgcgc
      601 gtcacctacg cgccggacag cggcacgccg cttttcgtac tcgaagccgc gctcgaggta
      661 ccctccgaag tcgcgctctc cgagcttcga cgcgaagtgg cggccctctc ggacgaggag
      721 aacctcgacg tgacgctcga gtccgggcgc tgagcgggcg cgccgtgcgg cggcgttccg
      781 cgctgtgggg cgctgcgccg gacagcgtgc cgtgtcgctc cggcggcgcg gtgttaggct
      841 tgggacgcca tgctcgagcg tcctcgccgt aatcgacgca ccgccgggat ccgagagctc
      901 gtgcgtgaga cgcacctcgg gccggagcac ctggttttgc ccctcttcgt ccaggagggg
      961 cagggcgtcg ccacgccgat cgcgtcgatg cccggtcacg ctcggctcac ggtcgacctc
     1021 ttggtcgaaa aggcgcacga agcgttcgcg ctgggcgtcc ccgccgtcga ggtgttcccg
     1081 cgcatccccg aagagcagaa ggacgcgcgt gccaccgaga gcacgaacgc tgcgggactc
     1141 gtgccccgcg ccgtccgcgc gctcaagcaa gcgttgcccg agctcaccgt catcacggac
     1201 gtggcgctcg atccgtactc ctcggacggc cacgacggcg tcgtcatcga cggccgcatc
     1261 gacaacgacg cgtcgctgcc gatcctcgcc gccatggccg tcgcgcaggc gcgcgcggga
     1321 gccgacgtcg tagcgccctc cgacatgatg gacggccgca tcgccgccgt gcgtcgcgcc
     1381 ctcgacgaag ccggcttcag cgacgtgctc gtctgcagct actgctgcaa atacgcctcc
     1441 gccttctacg gccccttccg cgaagccctc gattccgccc cccgcggcgg cgacaagaag
     1501 acataccaaa tggaccccgc gaacgtgcgc gaagcgctgc gcgaagtgcg cctcgacgaa
     1561 gccgagggcg ccgattggct catggtgaaa cccggcctgc cctacgcgga tgtgatccgc
     1621 cgcgtgcgcg agctgaccgc gctccccg
//
LOCUS       DATIML010000343         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2378049, whole genome shotgun sequence.
ACCESSION   DATIML010000343 DATIML010000000
VERSION     DATIML010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2378049"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..903)
                     /locus_tag="VLJ38_05905"
     CDS             complement(<1..903)
                     /locus_tag="VLJ38_05905"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39078.1"
                     /translation="MASSKYTAESITVLEGLDPVRKRPGMYIGGVGSTGLHHLVWEIV
                     DNSVDEAMNGHATEIAVTLHKDGQSITVSDDGRGIPIDIHPKHKKSALEIVYTTLHAG
                     GKFGDDNYKTAGGLHGVGASVVNALSSEVTVTVKRDGAAWSMEFHGGAVKSKLKKLGA
                     ARGSGTTVHFRPDPTIFPRTDFNPDTIRERLEIVSYLHRGVTVRFNDETHGQKYEYSH
                     AEGLVEYLRRIVTEAGARAVHEAPFTLARDEETRLEVAFLWTEATEEKIRSYVNGIPT
                     GSGGTHENGLRSGLVKAVRNYIDTH"
     gene            complement(910..>1634)
                     /locus_tag="VLJ38_05910"
     CDS             complement(910..>1634)
                     /locus_tag="VLJ38_05910"
                     /inference="COORDINATES: protein motif:HMM:NF015922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HSU39079.1"
                     /translation="STRLREGDSVLACEIGSTKSSIVFFSSFGTAYTARIIDIPATSG
                     YGEPIQKLFKLKDGERIVAAFSLDSRVTGALGSDPEKRGKTFAVAASSDGLGLAFGLE
                     PFATPSTRAGRRFAKPAEGAQIVGVERVHGKETLVAVTRARRALVCGVNEVSFLTGPG
                     KGVTLVKLEDDDALLGIKATSDSKDALVVETSMGGEQRITIQSYEKTGRGGRGREIMK
                     RGTLVRVVPQTPPAPAPFEEGK"
BASE COUNT          236 a          534 c          547 g          317 t
ORIGIN      
        1 gtgcgtgtcg atgtagttgc gcacggcctt gacgaggccg gagcggaggc cgttttcgtg
       61 cgtgccgccc gagcccgtcg ggatgccgtt cacgtagcta cggatctttt cttccgtcgc
      121 ttcggtccac aggaacgcga cctcgaggcg cgtctcctcg tcacgcgcga gcgtgaaggg
      181 cgcctcgtga acggcgcgcg cgccggcctc ggtcacgatg cggcgcaggt actcgacgag
      241 gccctcggcg tgagagtatt cgtacttttg gccgtgcgtt tcgtcgttga agcgcaccgt
      301 gacgccgcgg tgcaggtagc tcacgatctc gagccgctcg cggatcgtgt cgggattgaa
      361 gtcggtgcgc ggaaaaatcg tgggatcggg ccggaagtga accgtcgtgc cgctgccgcg
      421 cgcggcgccg agcttcttga gcttgctctt cacggcgccg ccgtgaaact ccatgctcca
      481 cgccgctccg tcgcgcttca ccgtgacggt gacctccgac gagagcgcgt tcacgacgga
      541 cgcgccgacg ccgtgcaggc ctccggccgt tttgtagttg tcgtcgccga atttcccgcc
      601 cgcgtggagc gtcgtgtaca cgatctcgag cgcggatttc ttgtgcttcg ggtgaatgtc
      661 gatcgggatg ccgcgcccgt cgtcggacac ggtgatcgat tgtccgtcct tgtgcagcgt
      721 gacggctatc tccgtcgcgt ggccgttcat ggcctcgtcg accgagttgt cgacgatttc
      781 ccaaaccaga tgatgcaggc ctgtcgagcc gacgcccccg atgtacatgc ccgggcgttt
      841 gcggaccggg tcgaggcctt cgaggaccgt aatgctctcg gccgtgtatt tcgagctagc
      901 catgggaaat cacttccctt cctcgaacgg cgcgggggcc ggaggtgttt gcgggaccac
      961 acgcacgagc gtgccgcgct tcatgatttc gcggccgcgg ccgccgcgac cggtcttttc
     1021 gtaactctgg atcgtgatgc gctgttcgcc gcccatcgag gtctcgacga cgagagcgtc
     1081 cttcgagtcg ctcgtcgcct tgatgccgag cagagcgtcg tcgtcctcga gcttcacgag
     1141 cgtgacgccc ttaccgggac cggtgagaaa gctcacttcg ttcacgccgc agaccagggc
     1201 gcggcgagcg cgcgtgaccg cgacgagcgt ctccttgccg tgcacgcgct cgacgccgac
     1261 gatctgcgcg ccctcggccg gtttggcgaa gcggcgcccg gcgcgcgtgc tcggggtcgc
     1321 gaacggctcg agcccgaacg ccaggccgag gccgtcactc gatgccgcca ctgcgaacgt
     1381 cttgccacgc ttttccggat ccgagccgag cgcgcccgtc acgcgggaat cgagcgaaaa
     1441 cgccgcgacg atgcgctcgc cgtccttgag cttgaagagc ttctggatcg gctcgccgta
     1501 gccgctggtc gcgggaatgt cgatgatgcg tgccgtgtaa gccgtgccga agctcgaaaa
     1561 gaagacgatc gaactcttgg tcgagccgat ttcacaggcg agcacgctgt cgccctcgcg
     1621 caggcgcgtg ctct
//
LOCUS       DATIML010000344         3402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1513415, whole genome shotgun sequence.
ACCESSION   DATIML010000344 DATIML010000000
VERSION     DATIML010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3402
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513415"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VLJ38_05915"
     CDS             complement(<1..305)
                     /locus_tag="VLJ38_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39080.1"
                     /translation="MVAWKRRGAVPLIVTAVLAACGLSLKYTRLLRGNVSDDAVTSMQ
                     YAKNLVLGNGLVFNVGERVDGYTNFLWVLLMAPCYALSRLFGFDFVASIVVLTVGFEA
                     "
     gene            complement(356..1774)
                     /locus_tag="VLJ38_05920"
     CDS             complement(356..1774)
                     /locus_tag="VLJ38_05920"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HSU39081.1"
                     /translation="MISDSLVTVAYLAAAVLFILSLGGLSTQQSAQRGNAYGITGMLI
                     AVAVAAVAGVRDFGLLAGAVAGGALIGTVLALRVEMTSMPELVAVLHSFVGLAAVLVG
                     VASYLAPGHAGATEGPIHQIEIYVGVFVGAVTFTVSIVAFGKLKGLIGSKPLLLPGRH
                     LINAGMLVACIALAVPFLGAESGEDLRSLLIQAGIAGVLGIHLVMAIGGADMPVVVSM
                     LNSYSGWAASAAGFMLGNDLLIVTGALVGSSGAILSIIMCRAMNRSFVSVILGGFGAD
                     EGKAPPKAAGAAPAGEATSITAAETAELLREAKSVIVVPGYGMAVAHAQYPVYEIATL
                     LRARGTEVRFAIHPVAGRLPGHMNVLLAEAKVPYDIVLEMEAINEDFPRTDVVLVIGA
                     NDIVNPGALDDTTSPIYGMPVLEVWKSKHVVVMKRSMASGYAGVENPLFFRPNTSMLF
                     GDAKKNVDAILTSLRATAAAAE"
     gene            complement(1771..3351)
                     /locus_tag="VLJ38_05925"
     CDS             complement(1771..3351)
                     /locus_tag="VLJ38_05925"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF006942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HSU39082.1"
                     /translation="MKIGVPKEIRPGERRVAATPESVGRLVKLGFEVLIEKDAGAGAA
                     FPDEEYELAGARTAPSARELWAQADIVLKVQPPEVHPELGHETELLREGGTLVSFFYP
                     AKNKELIERLAKRKATVLAMDQVPRVTRAQKMDALSSMANIAGYRAVIEAASFYGRFF
                     TGQMTAAGKVPPAKMLVIGAGVAGLAAIGAARGLGAIVRAFDTRAEVREQVQSMGAEF
                     LEVTIREEGSGVGGYAKEMSPEFIAAEMALFLRQAREVDIIITTALVPGKPAPTLITE
                     EMVLAMRPGSVIVDLGAEQGGNCALTQPGSVVVKNGVTIVGYVDLPSRLAPTASQLYS
                     SNLTHLLADMGGAKSFHVDLDDNVVRGALVLKDGELMWPPPKPPAPPPRPPEARVPAA
                     THPPPPIAAKGGHGAHGSSSAGPGSLWIVLGALTALVLAGSFAPREFVGHLTVFVLAC
                     FIGWQVIWNVTPALHTPLMSVTNAISGIIVVGGMLQLSHGLESPGTLLGAVAVLVATI
                     NIAGGFLVTQRMLRMFRR"
BASE COUNT          558 a         1174 c         1148 g          522 t
ORIGIN      
        1 gcttcgaagc cgaccgtgag cacgacgatc gacgccacga agtcgaagcc gaacaggcgc
       61 gacagcgcgt agcagggcgc catcagcagc acccacaaga agttcgtgta gccgtcgacg
      121 cgctcgccca cgttgaagac gagcccgttg ccgaggacta ggttcttcgc gtactgcatc
      181 gacgtgaccg cgtcgtccga cacgttcccg cgcagcagcc gcgtgtactt caggctgagc
      241 ccgcacgcag cgagcaccgc cgtgacgatc agcggtacgg cgccgcgccg tttccacgcc
      301 accatgcgag gtgcagcata gtccaacgga gcgccggggg ctcgtctcgg cagcgttatt
      361 ccgcggcggc cgcggtcgcg cgcaggctcg tgaggatggc gtcgacgttc ttcttggcgt
      421 cgccgaacag catgctcgtg ttcggccgga aaaacagcgg attttcgacg cccgcatagc
      481 cgctcgccat gctgcgtttc atcacgacca cgtgcttgct cttccacacc tcgagcaccg
      541 gcatgccgta gatcgggctc gtggtgtcgt cgagcgcgcc gggattgacg atgtcgttcg
      601 cgccgatcac gagcacgacg tcggtgcgcg ggaagtcctc gttgatcgcc tccatctcga
      661 gcacgatgtc gtagggcacc ttcgcttcgg cgagcagcac gttcatgtgg cccgggagcc
      721 gtcccgccac cgggtgaatc gcgaagcgca cctcggtgcc gcgggcgcgc aggagcgtcg
      781 cgatctcgta aaccggatat tgggcgtgcg cgacggccat gccgtagccc ggcacgacga
      841 tgacgctctt cgcttcgcgc aacagctcgg ccgtttcggc cgccgtgatc gacgtggcct
      901 ccccggccgg cgcagcgcct gcggctttgg gcggcgcctt gccttcatcg gctccgaaac
      961 cacccaaaat cacgctcacg aacgagcgat tcatggcgcg gcacatgatg atgctcagga
     1021 tcgcgccgct cgaaccgacg agcgcccccg tcacgatcaa aagatcgttg ccgagcatga
     1081 acccggccgc cgacgccgcc cagccggagt agctgttcag catcgagacg acgacgggca
     1141 tgtcggctcc gccgatggcc atcacgagat gaatcccgag cacgcccgcg atgccggctt
     1201 ggatcaggag cgagcgtagg tcctcgccgg actcggcgcc gaggaacggc accgcgagcg
     1261 cgatgcatgc cacgagcatg ccggcgttga tgaggtggcg gcccgggagg agcagcggct
     1321 tgctgccgat gagccccttg agcttgccga acgcgacgat cgagaccgtg aacgtgacgg
     1381 cgccgacgaa cacgccgacg tagatctcga tctggtgaat cggaccttcc gtcgcgcccg
     1441 cgtggcccgg cgcgaggtag ctcgcgacac ccacgagcac ggcggcgagg ccgacgaagc
     1501 tgtggagcac ggccacgagc tcgggcatcg acgtcatttc gacgcgcagc gcgagcacgg
     1561 tgccgatcag cgcgccccct gcgacggcgc cggcgaggag cccgaaatcg cgcacccccg
     1621 cgacggccgc gaccgcgacg gcgatcagca tgccggtgat gccgtaagcg ttgccgcgct
     1681 gcgcgctctg ctgcgtgctg agcccgccga ggctcaggat gaagagcacg gcggcggcca
     1741 ggtaggccac ggtgacgaga ctgtcggaga tcatcgccgg aacatcctca gcatgcgctg
     1801 cgtcacgaga aagccacccg cgatgttgat cgtcgcgacg agcaccgcca cggcaccgag
     1861 cagcgtgccg ggcgactcga ggccgtggga aagctgcagc atgccgccca cgacgatgat
     1921 gccgctgatc gcgttcgtga cgctcatgag cggcgtgtgc agggcgggcg tcacgttcca
     1981 aatcacctgc cagccgatga agcaggcgag cacgaatacc gtcagatgac ccacgaactc
     2041 acgcggcgca aaggagcccg cgagcacgag cgccgtgagc gcgccgagca cgatccagag
     2101 cgagcccggc cccgccgagc tgctgccgtg agcgccgtgc ccgcccttcg ccgcgatggg
     2161 cggcggcgga tgtgttgcgg ccgggacgcg cgcctcgggt ggtctcggcg gcggtgcggg
     2221 cggcttcggt ggcggccaca tgagctcgcc gtctttcaag acgagcgcgc cgcgcacgac
     2281 gttgtcgtcg aggtcgacgt ggaagctctt ggcgccgccc atgtcggcga gcaggtgcgt
     2341 caggttcgag ctgtagagct ggcttgccgt gggcgcgagg cgactcggca aatcgacgta
     2401 gccgacgatg gtgacgccat tttttacgac gacgctgccg ggctgcgtga gcgcgcagtt
     2461 gccgccctgc tcggcgccca aatcgacgat caccgagccg ggacgcatcg cgagcaccat
     2521 ctcttcggtg atcagggtcg gcgcgggttt gccgggcacg agcgcggtcg tgatgatgat
     2581 gtcgacttcg cgcgcctggc gcagaaacag cgccatctcg gcggcgatga actcggggct
     2641 catctccttg gcgtagccgc cgacacccga gccttcctcg cggatcgtca cctcgaggaa
     2701 ctcggcgccc atgctttgaa cttgttcgcg cacctcggcg cgcgtgtcga acgcgcgcac
     2761 gatggcgccg agtccccgcg cggcgccgat ggcggcaagt cccgcgacgc cggcgccgat
     2821 cacgagcatc ttggcgggcg gcaccttgcc cgcggccgtc atctggcccg tgaagaagcg
     2881 gccgtaaaag ctcgccgctt cgatgacggc gcggtaaccc gcgatgttcg ccatcgagct
     2941 caaggcgtcc atcttttgcg cgcgcgtgac gcgcggcacc tgatccatcg cgagcaccgt
     3001 cgccttgcgc ttggcgagcc gctcgatgag ctccttgttc ttggccgggt agaagaagct
     3061 cacgagcgtg ccgccctcgc gcaagagctc cgtctcgtgg ccgagctcgg ggtgcacctc
     3121 gggcggctgc accttgagca cgatgtccgc ctgcgcccag agctcgcgcg cggacggcgc
     3181 cgtgcgggct ccggcgagct cgtactcctc gtccgggaac gcggcgcccg cgcccgcgtc
     3241 cttctcgatc aacacctcga acccgagctt gacgagacgg ccgacgctct cgggcgttgc
     3301 tgcgactcgg cgttcgcccg gccggatttc cttcggcact ccgatcttca tggcggcctc
     3361 gaaaacaggc gcgccgaccc taccaccgaa tcacgagctt ct
//
LOCUS       DATIML010000345         6992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_70936, whole genome shotgun sequence.
ACCESSION   DATIML010000345 DATIML010000000
VERSION     DATIML010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6992
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70936"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="VLJ38_05930"
     CDS             complement(<1..723)
                     /locus_tag="VLJ38_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HSU39083.1"
                     /translation="MARNTLVINCDIRETRVALIENGIIAELQIERASARGTVGNIVL
                     GRVTRVLPGMQAAFIDVGLDRAAFLHVEDLIRPDDFEAYLAGARKHESEDRWKKGDGG
                     KRHGAPTEAAGVEHDDDDDDDDEQAGAASAAEAHGGDSAPGAAPFNAEDADDEDDEDD
                     EDDDDLDEDTDEDEGDEEDEDEDGGEGEEAAETDEPSDPARSAPDAQAPRGEGSEGAP
                     ESDSETDEDDEDDEDDEDDEDDE"
     gene            980..1714
                     /locus_tag="VLJ38_05935"
     CDS             980..1714
                     /locus_tag="VLJ38_05935"
                     /inference="COORDINATES: protein motif:HMM:NF021613.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HSU39084.1"
                     /translation="MSESHLVLDIETVLDAELPIVPTADNERLPAPPHHRVVVIGALL
                     LDPNYDVRKIGVVGEAKDEAGMLRDFAKLLEDRRPSLVTFNGRSFDMPVIATRCLRHG
                     IPLRHYYRSRDVRYRFTADGHLDLMDYVADFGAAKSSRLDVIAKLCGMPGKVGIDGKD
                     VGPMVHAGRLQEVRNYCLCDVAQTAGVFLRVQLVRGELEREAYLTAMRGLLALIRSDE
                     RLAPVAAALNEPRLLLDAEAPAPPQG"
     gene            1750..2082
                     /locus_tag="VLJ38_05940"
     CDS             1750..2082
                     /locus_tag="VLJ38_05940"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002019.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HSU39085.1"
                     /translation="MRELLEKHCRELPPGTPALPVTAITRYLAELPGWSLASDGQRIT
                     KNYEFKNFHETMEFVNALAWVVHREDHHPDLEVSYKRCRVVYSTHSVGGVSENDVICA
                     AKIEALLR"
     gene            complement(2139..4538)
                     /locus_tag="VLJ38_05945"
     CDS             complement(2139..4538)
                     /locus_tag="VLJ38_05945"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 65 protein"
                     /protein_id="HSU39086.1"
                     /translation="MKYGHFDDEAREYVITRPDTPRPWSNYLGSTEYGAIITNHAGGY
                     SFYRSAANQRFLRLRGNSVPLDQPGRYFYLRDRSNGDYWSGSWQPVGKPLDKYESVCR
                     HGTAYTVITSKYEGIETEATYFVPLGQVFEYWRLKVTNKSQTKRQISVYTYCEFTSVG
                     HLYNDLVNLQYSLFACKAEWQDDMLTVASHPYEPFDFDKLGDPGRYWMKITGAPVTAF
                     ETLRDNFLGFYGTYKEPEALKTGKLTGFQTEGENVVGVQQVDLDLAPGETRELIVLLG
                     LGTPDSHGKKTIAEFGSPERCEKELQAVKQSWHSLLGGVKVKTPDHEFDSMVNVWNAY
                     NALVTYAWSRAASLIYNGERDGLGYRDTVQDFLGVTPLLKDKMRERLELMLTGQVECG
                     GAMPLVKPFSHRPGHEETPPKEHFRSDDALWLFNAVPTYVAETGEIDFYKKVLPYADR
                     GEATVLGHLRRALEFNLERTGRNGLPSGLAADWNDCCQLGYTGESVMVAFQVRYGLGV
                     YAEIAERLDLPAEARWALERQATLDARIQKTCWDGEWFIWATGKDGTVFGTKKMEEGK
                     VYINTQVWAVISGAATPEQARLAMKSMKDYLATPYGLMLSAPPFEKTSRDVMVGVVYN
                     KGIKENGGIFNHPQGWAVMAECLLGNGDQAYEYYRAYMPSAYNERAEIRQIEPYVHSQ
                     TTYASINVNAGKSRVPWLTGTVSWSYFVALQSVLGVRPELDGLRIDPCIPTSWPGFEL
                     ERVFRGKRITIRVTNPNKKSKGVRSLTVNGKHIAGNLLPLSELADGAVVDARIDGPAS
                     A"
     gene            complement(4694..5914)
                     /gene="alr"
                     /locus_tag="VLJ38_05950"
     CDS             complement(4694..5914)
                     /gene="alr"
                     /locus_tag="VLJ38_05950"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HSU39087.1"
                     /translation="MTSRTPALSALAPALATPLPRVLRPQRAVPADAVRPTRAEVNLA
                     NLRHNLRVMQRAAGGRPVWAVLKADGYGHGAKAVARTLERAGARGMCVALLEEGIELR
                     DAGIKLPILVTGGYYGRAWGELLRHDLTPVLHDPGQIELLAEEVRFSGAEPMRAHVKI
                     DTGMSRLGMSHGDLPRLAEALTRHPEVKLEGLMTHFACADAGETPSIEAQLDRFDDAT
                     AVLSRLGIVPELRHAANSAAVLRSERAWLDLVRPGIALFGVEPKAGLCRELRPVMRVR
                     TEIIALRELPVGATAGYGGTWVAQRPSRIATVPIGYADGLVRALSNQGALLVRGKRAL
                     IAGAVSMDMTMLDVTDIEGVRLGDECCVLGTKKGPLGEDTISVSEMAAELHTIPWEVM
                     TNVSRRVPRFYREP"
     gene            complement(6112..6714)
                     /locus_tag="VLJ38_05955"
     CDS             complement(6112..6714)
                     /locus_tag="VLJ38_05955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39088.1"
                     /translation="MATASKLSFTGLLAGLVGCGPSLVTVHEGTVRFEHCYRVDLEPR
                     VTTPNRVACWRSWVSAYTVGQPRDRIEYAERRLHALESGDTSAPDLALGADRPPGPRQ
                     FYLVVPAPTSVHAPPPPVAKPVEETEPDAASDAGAPNERQAKTTDAKAGDAEVPPGST
                     CTKRCQLGWHSCDASCEASGASGCSKCKAAYSKCMRSCFD"
     gene            6795..>6992
                     /locus_tag="VLJ38_05960"
     CDS             6795..>6992
                     /locus_tag="VLJ38_05960"
                     /inference="COORDINATES: protein motif:HMM:NF012881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39089.1"
                     /translation="MFTGLVAAVGRIAATERRDLGTRIQIAAELGALDIGESICVSGA
                     CLTVVTRTANAFSADVTRETLE"
BASE COUNT         1071 a         2349 c         2320 g         1252 t
ORIGIN      
        1 ctcgtcgtcc tcgtcgtcct cgtcgtcctc gtcgtcctcg tcgtcctcgt ccgtctcgga
       61 atcggactcg ggagcaccct cggagccttc gccgcgtggc gcctgcgcgt ccggggcgct
      121 gcgagcggga tcgctgggtt cgtcggtttc ggcggcttct tcgccttccc cgccgtcctc
      181 gtcctcgtcc tcctcgtcgc cctcgtcctc gtccgtgtct tcgtcgagat cgtcgtcgtc
      241 ctcgtcgtcc tcatcgtcct cgtcgtcggc atcctcggcg ttgaacggcg cggctccggg
      301 cgccgaatcc ccgccgtgcg cctcggcggc gctcgctgcg cctgcctgct cgtcgtcgtc
      361 gtcgtcgtcg tcgtcgtgtt cgacaccggc ggcttcagtg ggcgcgccgt gccgcttccc
      421 gccgtcaccc ttcttccagc ggtcctccga ctcgtgcttg cgggcgcccg cgaggtacgc
      481 ctcgaaatcg tccggacgga tcagatcttc gacgtgcagg aacgctgcac gatcgagtcc
      541 cacgtcgata aaggccgcct gcatgccggg gagcacgcgc gtcacccgac cgagcacgat
      601 gttgcccacg gtgccgcgcg ctgaagcgcg ctcgatctgc agttcggcga tgattccgtt
      661 ttcgatgaga gcgacccgcg tttcgcgaat gtcgcagttg atgaccaatg tatttcgcgc
      721 catggctgat aaaaatctgg cgacggtgga cgcgacctcg gctccccacc cgtggggtgc
      781 cggctgcgcg cctcgtctgt cacggacata tcatgcaggc cggccgcggc gcccgtacac
      841 agtcaaaatg cccatgaaat gcagcgactt agtctcggcg gtccccacct gccacgccgg
      901 ggaaaccggc gccgccgctg accgaacctg ctaagcgtcc ctcccgccct gcccaacgcc
      961 ggcacctccg cggaaccccg tgagcgaatc ccacctcgtc ctcgatatcg agacggtcct
     1021 cgacgctgag cttccgatcg tgcccacggc cgacaacgag cggctgccgg cgccgccaca
     1081 tcatcgcgtg gtcgtcatcg gcgcgctcct gctcgatccc aactacgacg tccgtaaaat
     1141 cggcgtcgtc ggggaggcga aggacgaagc gggcatgctg cgcgacttcg cgaagctgct
     1201 cgaggatcgc cggccgagcc tcgtcacctt caacggccgc tcgttcgaca tgcccgtcat
     1261 cgccacgcgc tgcctgcgcc atggcattcc gctccggcac tattaccgtt cgcgcgacgt
     1321 gcgctatcgc ttcacggcgg acgggcacct cgacctgatg gattacgtcg cggacttcgg
     1381 cgccgccaaa tcgtcgcggc tcgacgtgat cgccaagctt tgcggcatgc cgggcaaggt
     1441 gggtatcgac ggcaaagacg tgggcccgat ggtgcacgct ggtcgcttgc aagaagtgag
     1501 aaactactgt ctctgcgacg tggcgcagac ggcgggcgtt ttcctacggg ttcagctcgt
     1561 acgcggtgag ctcgagcgtg aggcgtattt gaccgcgatg cggggcttgc ttgcgctgat
     1621 cagaagcgac gagcggctcg cgcccgtggc ggccgcgctc aacgaaccgc gtcttttgct
     1681 cgacgcggaa gcgccggcgc cgccgcaagg ctgattgaag cggcgcgagt tcgagcgcat
     1741 gctcgcgcca tgcgagagct cctcgaaaag cattgccgag agctgccgcc cggcacgccc
     1801 gcgttgcccg tcaccgccat cacgcgctat ctcgccgagc tgcccggctg gtcgctcgcg
     1861 tcggacggcc agcgcatcac caagaactac gaattcaaga acttccacga aacgatggag
     1921 ttcgtgaacg cgctcgcttg ggtcgtgcac cgcgaggatc atcaccccga cctcgaggtt
     1981 tcctacaagc gctgccgcgt cgtttactcg acccacagcg tcggcggcgt gagcgaaaac
     2041 gacgtcattt gcgccgcgaa gatcgaggcg ctgctgcgct gagctgcgat cctccgcgcg
     2101 ggcgctcggt cgccgccact cgcgccgcta ggcgctcgtc acgcggacgc gggcccgtcg
     2161 atgcgcgcgt cgaccacggc gccgtcggcg agctccgaga gcggcaacag gttcccggcg
     2221 atgtgcttgc cgttcaccgt gagcgagcgc acgcccttgg acttcttgtt cgggttcgtc
     2281 acgcggatcg tgatgcgctt gccgcggaac acgcgttcga gctcgaagcc gggccagctc
     2341 gtcgggatgc acggatcgat gcgcaatccg tctagttccg gacgcacgcc gagcacgctc
     2401 tgcagcgcga cgaagtagct ccaggacacc gtgcccgtga gccagggaac gcgcgacttg
     2461 cctgcgttca cgttgatgct cgcgtacgtg gtctggctgt ggacgtacgg ctcgatttgc
     2521 cgtatttcgg cgcgttcatt gtaggcggac ggcatgtacg cccggtaata ttcgtaggct
     2581 tggtcgccgt tgccgagcag gcactcggcc atgacggccc agccctgggg gtgattgaag
     2641 atgccgccgt tttccttgat gcccttgttg tagacgacgc cgaccatcac gtcgcgcgag
     2701 gtcttttcga agggcggcgc gctcagcatc aagccgtaag gcgtcgcgag gtagtccttc
     2761 atcgacttca tcgccaggcg cgcttgctcg ggcgtcgccg cgccgctgat cacggcccag
     2821 acctgggtgt tgatgtagac cttgccctct tccatcttct tcgtgccgaa gacggtgccg
     2881 tctttaccgg tggcccagat gaaccattcg ccgtcccagc acgtcttctg gatacgcgcg
     2941 tcgagcgtcg cctggcgctc gagcgcccag cgcgcctccg cgggcaaatc gaggcgctcg
     3001 gcgatctcgg cgtaaacacc gaggccgtag cgcacctgga acgcgaccat cacgctctcg
     3061 cccgtgtaac cgagctgaca gcagtcgttc caatccgcgg cgagaccgga gggcaagccg
     3121 ttgcggcccg tgcgctccag gttgaactcg agggcgcgcc gcaggtgccc gagcacggtc
     3181 gcttcgccgc gatcggcgta ggggagcacc ttcttgtaaa agtcgatttc ccccgtttcg
     3241 gcgacgtagg tcggtacggc gttgaagagc cacagcgcgt cgtcgctccg gaagtgctcc
     3301 ttgggcggtg tctcttcgtg gccgggccgg tgcgagaacg gtttcacgag cggcatggcg
     3361 ccgccgcact cgacctgccc cgtgagcatg agctcgagcc gctcgcgcat cttgtctttg
     3421 aggagcggcg tgacgccgag gaagtcctgc acggtgtcgc ggtagccgag accgtcgcgt
     3481 tcgccgttgt agatgagtga ggccgcgcgc gaccacgcgt aagtgacgag cgcgttgtac
     3541 gcgttccaga cgttgaccat cgagtcgaac tcgtggtcag gcgtcttcac cttcacgccg
     3601 ccgagcagcg agtgccacga ctgcttgacg gcctggagct ccttctcgca gcgttcgggg
     3661 ctaccgaact cggcgatcgt cttcttgccg tgcgagtccg gggtaccgag cccgagcagc
     3721 acgatgagct cgcgcgtctc gccgggcgcg agatccagat cgacctgctg cacgccgacg
     3781 acattttcgc cctcggtctg aaagcccgtg agcttgccgg tcttgagcgc ctccggctct
     3841 ttgtaagtgc cgtaaaagcc gaggaaattg tcgcgcagcg tctcgaatgc ggtcacgggt
     3901 gcgcccgtga ttttcatcca gtagcggccg ggatcgccga gcttgtcgaa gtcgaacggc
     3961 tcgtacggat gcgacgcgac cgtcagcatg tcgtcctgcc actccgcctt gcaggcgaag
     4021 agcgaatact ggaggttcac gaggtcgttg tagaggtggc cgacgctcgt gaactcgcaa
     4081 taggtgtaga cggagatctg ccgcttcgtc tgcgatttgt tggtgacctt cagccgccaa
     4141 tattcgaaga cctggccgag cgggacgaag taggtggcct cggtctcgat gccctcgtat
     4201 ttcgaggtga tgaccgtgta cgcggtgccg tggcggcaga ccgactcgta cttgtcgagc
     4261 ggcttgccga cgggctgcca gctcccgctc caatagtcgc cgttcgagcg atcgcgcagg
     4321 taaaagtagc ggccgggttg gtcgaggggc acggagttgc cgcgcagccg gagaaagcgc
     4381 tggttcgccg cgctgcggta gaagctgtag ccgcccgcgt ggttggtgat gatggcgccg
     4441 tattcggtgc tgccgaggta gttcgaccag gggcggggcg tgtcggggcg tgtgatcacg
     4501 tactcacgcg cttcgtcgtc gaaatgccca tacttcatcg gctcaaactc ctacacaccc
     4561 gaccggggga taaagggggc gtatttatcc ctggcgctag cgaatttgca aatgctgccc
     4621 cggaacgggc gccgggcgcg cttgcgacgc gacgcgtcta tgcatgcgga tcgggcagtg
     4681 gaagcagtcg cgctcaaggc tcccggtaaa accggggcac gcggcgcgac acgttggtca
     4741 tcacttccca ggggatggtg tgcagctcgg cggccatttc cgagacggaa atggtgtcct
     4801 ccccgagcgg ccccttcttc gttccgagca cgcagcattc atcgccgagc cggacgccct
     4861 cgatgtccgt cacgtcgagc atcgtcatgt ccatgctcac ggcaccggcg atgagggcgc
     4921 gcttgccgcg gaccagcaga gcgccctggt tcgataaggc gcggaccagg ccgtcggcgt
     4981 acccgatggg aaccgtggca atccggctcg ggcgctgtgc cacccaagtg ccgccgtacc
     5041 cggccgtcgc cccgacgggc agctcgcgca gcgcgatgat ctcggtgcga acgcgcatga
     5101 ccggccggag ctcgcggcag agcccggctt tgggctccac gccgaagagg gcgatccccg
     5161 gccgaacgag atcgagccag gcgcgctccg agcgaagcac cgccgcgcta ttggccgcat
     5221 ggcgcaattc cgggacgata ccgagccgcg agagcaccgc cgtggcgtcg tcgaagcggt
     5281 cgagctgcgc ctcgattgac ggcgtttcgc cggcgtccgc gcacgcaaag tgcgtcatca
     5341 gcccctcgag cttcacctcg ggatggcggg tgagcgcttc ggcgaggcgc ggcaggtccc
     5401 cgtgcgacat gccgagtcgg ctcatgcccg tatcgatctt gacgtgcgca cgcattggct
     5461 ccgcgccgga gaagcgcacc tcctcggcga gtagctcgat ttgtcctgga tcgtgcagta
     5521 ccggcgtgag gtcgtggcgc aagagctcac cccaggcgcg gccgtaatat ccgcccgtga
     5581 cgaggatggg cagcttgatc ccggcgtccc gaagctcgat accctcttcg agcaaggcga
     5641 cgcacatccc ccgcgccccg gcgcgttcga gcgtgcgcgc cacggctttc gcgccgtgtc
     5701 cgtagccgtc cgccttgagc accgcccaga ccgggcggcc cccggcggca cgctgcatga
     5761 cgcgaagatt gtgccgaagg ttcgcgagat tcacctcggc gcgcgtcgga cgcacggcat
     5821 cggcgggtac ggcgcgctgc ggtctcaaca cccggggcag cggcgtcgcg agggcggggg
     5881 caagagcgct cagagccggg gtgcgcgagg tcatgcagga cttccttggg tactgccgct
     5941 cggtgcggcg cgtcaacaaa ttgggcctaa agcaagcccc gtgcgcgcca gtagcgtgcg
     6001 aacattccac gagtttcggg cagattcccg cgatccgccg cgcgttccga ccccggctgt
     6061 gtcctgcgag ccaactcttg cgggtgaacg cccacgcggt cgccggtctg ttcagtcgaa
     6121 gcaactccgc atgcacttcg agtacgcggc cttgcacttc gagcagccgc tcgcgcccga
     6181 ggcttcgcag cttgcgtcgc agctgtgcca gccgagctgg cagcgcttgg tgcaggtcga
     6241 gccgggcggc acctcggcgt caccggcctt ggcgtcggtc gtcttcgctt ggcgttcgtt
     6301 cggcgcgccg gcgtcggaag cggcgtcggg ctcggtctcc tccacgggct tcgctacggg
     6361 cggaggcggc gcgtgcacgc tcgtcggcgc cgggaccacg agatagaact gccgcggtcc
     6421 cggcgggcga tcggcgccga gcgcgaggtc gggtgccgac gtgtcgccgc tctcgagcgc
     6481 gtgcagacgt cgctctgcat actcgatgcg atcacgcggc tgcccgacgg tgtacgccga
     6541 aacccagctg cgccagcacg cgacgcggtt cggcgtggtg acgcgaggct cgaggtcgac
     6601 gcggtagcaa tgctcgaaac gcaccgtgcc ctcgtgcacc gtcacgagac tcgggccgca
     6661 accgacgagc ccggcgagca agcccgtgaa cgagagcttg gacgccgttg ccatcgcagg
     6721 ctgatcgtgc gtccgcgtcg agcgacttgc aagcgaggca aactgacgta cggcagcgtg
     6781 ctatacacgg gcgcatgttc acgggcctcg tcgctgccgt cggtcgcatt gcagcgaccg
     6841 aacgacgcga ccttggcacg cggatccaga ttgcagcaga gctcggcgcg ctcgacatcg
     6901 gggagtcgat ctgcgtgagc ggcgcgtgct tgaccgtcgt cacgcgaacg gccaacgcat
     6961 tcagcgcaga cgtcacgcgt gaaacactcg ag
//
LOCUS       DATIML010000346         4859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1513915, whole genome shotgun sequence.
ACCESSION   DATIML010000346 DATIML010000000
VERSION     DATIML010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513915"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1379)
                     /locus_tag="VLJ38_05965"
     CDS             complement(<1..1379)
                     /locus_tag="VLJ38_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HSU39090.1"
                     /translation="MVSSAPALAVAPPPGSDALELAQALSISRTLASWLADRGFRDAA
                     LTRRFLSPRLAELSPPHAMLDRDAAAERIARAITARERIAVFGDYDCDGITATAVLTE
                     LLRALDGDVVPLVAERSGGGYGVSPAAVERLHATGATLVVTCDCGSSDHASLAELARR
                     GIDCVVIDHHLVPDEPLPAVAFLNPQRPGCGFPFKWLASCGLALSVGAAVRARLGRTI
                     DLTAVLDLVAIGSIADVVPLVGDNRALVRAGLARLADAKRPGLRALFELAKLERGVAL
                     GADEVAFRIAPRLNAPGRLGSAAVTLELLLEKNPARADVIAGEVEQKNAERRVLQDRM
                     IAEALAEVREQRWDEAPAIVIGREGWLPGIVGIVAGRLADELGRPVVVIGFENGAGRG
                     SVRGPRGSRLYDALKAVSPVLVRFGGHQAAAGLEVTAERLGELREGFCAAVTAYGRDL
                     SAQAASAGV"
     gene            complement(1549..1863)
                     /locus_tag="VLJ38_05970"
     CDS             complement(1549..1863)
                     /locus_tag="VLJ38_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39091.1"
                     /translation="MSEQHRAACTSAQTLLGAFGSERTVPLRAASKRAGLTMQEALDG
                     LRVLDGMDLVRVQAGDHGPLVTVMAIPEDHVRIIGPDGAVRWVFIAKPIDPPEVEEHE
                     LN"
     gene            complement(2078..3319)
                     /gene="secF"
                     /locus_tag="VLJ38_05975"
     CDS             complement(2078..3319)
                     /gene="secF"
                     /locus_tag="VLJ38_05975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HSU39092.1"
                     /translation="MRFFSSGKVYDFMRWRFFFVGLSLIITIGSIALLALGKARLGTD
                     FRGGTELEVAFRGHVDVAEIRQAVTSAGFGAPDVIKVDDPKNPDRYLIRVQEVSTISH
                     ETQALVERRLCSGANLPAAECPPQKQATEVRFSPGGDKITVRFADEPDLDWVRQQAAS
                     VPGIHLHPGANNPHVQNARDHKVEIELMSKGDQLIGALQRALGARAPDHALRSEWIGP
                     RAGAQLRDSAIKSILIEIVFIMAYIAFRFDLRFAPGGIISLIHDATGSLGMLILLGKE
                     IDLTTVAAILTVIGYSVNDTVVIYDRVRENIGKLRGASFRDLINISTSEMLGRTILTT
                     GTVQLSLLAFFIWGTGTLKNFAFALTVGFMFGIYSTIYIALPVTEWLDKVLFSRMGGG
                     SNKGTKGSRGKPSARRATAPA"
     gene            complement(3351..>4859)
                     /gene="secD"
                     /locus_tag="VLJ38_05980"
     CDS             complement(3351..>4859)
                     /gene="secD"
                     /locus_tag="VLJ38_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HSU39093.1"
                     /translation="PSKIDERFLEHFRPELSYTRSQDGRNWEFRIRSSVESGIRERAV
                     GQAREIINRRIDELGLREAAVSTRDEDIIVEVPGEDEKSFANIRDIISQTARLEFKLL
                     DDDSDFMKTVREKASASPDSLPEGLEFVSEQAPVGLDKSGDIKHNLVTYAFLKKGDKE
                     PIQHTLERLKEWAATLPVPPDRELGFELVRKTVDQVSLKEEDVGYRTYLLKSRAEVTG
                     DQVRDAAAQPEQGQGALGGWHVALTFTEQGGRIFERITADNIKRRFAIILDGRIESAP
                     VIQTRIPGGHAQITMGSSDPEAQLQSARQLELVLRSGALPAPISPSNEQRIGPSLGRD
                     SIDLGVQGALGGSALVLIFMVVYYNRAGFIADIAVIMNLFLQLAILASFGASMTLPGI
                     AGLALTIGMSVDVNVLINERIREELDLGKTPRAAVEIGYKRAFSAIFDGHITSVIAGV
                     VLSQYGTGPIKGFAAALLVGVVCSLFTGVAMTRVMFDLWVRFLGRQGRLALG"
BASE COUNT          791 a         1597 c         1710 g          761 t
ORIGIN      
        1 ttgacgccgg ccgacgccgc ttgcgcggac aggtcgcgac cgtaggccgt cacggccgcg
       61 cagaagccct cgcggagctc gcccaggcgc tcggccgtga cctcgagccc cgcagccgct
      121 tggtgcccgc cgaaacgcac gagcacgggg ctcacggcct tgagcgcgtc gtaaaggcgc
      181 gagccccgcg gcccgcgcac cgagccgcgc cccgcgccat tctcgaagcc gatcacgacg
      241 acgggacgcc cgagctcatc cgcgagccgg ccggcgacga tgccgacgat gccggggagc
      301 cagccttcgc gcccgatcac gatcgcaggc gcctcgtccc agcgttgctc gcgcacctcg
      361 gcgagtgcct cggcgatcat ccgatcttgg agcacgcgcc gctcggcgtt cttttgctcc
      421 acttcgccgg cgatgacgtc ggcgcgcgcg ggatttttct cgagcaggag ctcgagcgtg
      481 acggcggcgg agccgagacg cccgggtgcg ttcaggcgcg gggcgatccg gaacgcaact
      541 tcgtcggcac cgagcgccac gccgcgttcg agcttggcga gctcgaacag cgcgcgcaag
      601 ccgggacgct tggcgtccgc gagccgcgcg agcccggcgc gcacgagcgc acgattgtcc
      661 cccacgagcg gcacgacgtc ggcgatgctg ccgatcgcga cgagatcgag cacggccgtc
      721 aggtcgatgg tgcggccgag ccgcgcgcgc accgctgcac cgaccgacag cgcaagcccg
      781 cacgaggcga gccacttgaa cggaaaaccg cagcccgggc gctgcggatt caggaacgcc
      841 acggccggga gcggctcgtc gggaaccaaa tggtgatcga tgaccacgca gtcgatgccg
      901 cggcgcgcga gctcggcgag cgaggcgtga tcggaggagc cgcaatcgca cgtgaccacg
      961 agcgtcgcgc cggtagcgtg caggcgctcg acggccgcgg gcgacacgcc gtaaccgccg
     1021 ccgctccgct cggcgacgag cggcaccacg tccccgtcga gcgcgcggag cagctccgtg
     1081 agcacggccg tggcggtgat gccgtcgcag tcgtaatcgc cgaacaccgc gatgcgctct
     1141 cgggccgtga tggcgcgagc gatgcgttcg gcggccgcgt cgcgatcgag catcgcgtgg
     1201 ggaggcgaca gctcggccaa acgcgggctc aggaagcgcc gcgtcaaggc ggcgtcacgg
     1261 aagccgcggt cggcgagcca gctcgcgagc gtgcgcgaga tggaaagcgc ctgcgcgagt
     1321 tcgagcgcat cggaaccggg cggaggggcg acggcgaggg ccggcgcgct cgaaaccatt
     1381 cgccacgctt acttttgccc cgcgcggaac gctagccccg agcggacgta acgtgaccgc
     1441 gctcggcggg tggaaaaaag aaagggccgg ccggcgtggt gaagcgctgg cgcggccccg
     1501 gggactcgcg aggtgggggg gtcgcgagtc gacccttaga gttgcccgtt agttgagctc
     1561 gtgctcttcg acctcgggcg ggtcgatggg tttggcgatg aagacccagc ggacagcccc
     1621 gtcggggccg atgatgcgca cgtggtcttc cgggatggcc atcacggtca cgagcgggcc
     1681 gtggtcacca gcctgaacgc gcacgaggtc catgccgtcg agcacccgca ggccgtcgag
     1741 cgcctcttgc atcgtcaggc cggcgcgctt cgacgcagcg cgcagcggca ccgtccgttc
     1801 agaaccgaac gcgccgagca gcgtttgcgc gctggtgcag gcggcacgat gttgttcgga
     1861 catctcctcc cagagctcca ccgggaaacc caggggccgc gctgtggtgg cggtaacctc
     1921 atgagcgaac gtttggggag cgaacataga cagaacttaa ggtcggggag ccccctgtca
     1981 acggagcgtc accgtccctg cccatatccg ccgtatccgc cgctcctcgg ctgtcccgtt
     2041 ctgggcctat gacagcggga tcaggcggac agcgggctca cgcgggggcc gtggcgcgcc
     2101 gggcgctcgg cttgccgcgc gaacccttgg tgcccttgtt cgaaccgccg cccatgcgcg
     2161 agaagaggac cttgtcgagc cattccgtca cgggcagagc gatgtaaatc gtcgaataga
     2221 tgccgaacat gaacccgacc gtcagggcga aggcgaagtt tttgagggtg cctgtgcccc
     2281 aaatgaagaa ggcgagcagg ctcagctgca ccgtacccgt ggtcaggatc gtccgcccga
     2341 gcatctcgga agtgctgatg ttgatgaggt cgcggaagct tgcaccgcgg agcttgccga
     2401 tgttttcgcg cacgcggtcg tagatgacga cggtgtcgtt cacggagtag ccgatgaccg
     2461 tgaggatcgc ggcgacggtc gtcagatcga tctccttgcc gagcaggatc agcatcccga
     2521 gcgagcccgt cgcgtcgtgg atcagggaga tgatgccgcc cggcgcgaac ctgaggtcga
     2581 accggaaggc gatgtacgcc atgatgaaga cgatctcgat caggatgctc ttgatcgcgc
     2641 tgtcgcggag ctgagcgccc gcgcgtgggc cgatccactc cgagcgcagg gcgtggtccg
     2701 gcgcacgtgc accgagcgca cgctggagcg cgccgatgag ctggtcaccc ttgctcatga
     2761 gctcgatttc gaccttgtgg tcgcgtgcgt tctgcacgtg cgggttgttg gcgcccggat
     2821 gcaggtggat gccgggcacg ctcgcggcct gttggcgaac ccagtcgagg tcgggctcgt
     2881 cggcgaagcg cacggtgatc ttgtcgccgc cgggactgaa gcgaacctcg gtcgcttgct
     2941 tctgcggtgg gcactcggct gccggcaggt tcgcccccga gcagagcctg cgttcgacga
     3001 gcgcctgcgt ctcgtgcgag atggtcgaga cctcctgcac gcggatcagg tagcgatcgg
     3061 gattcttggg gtcgtctact ttgatcacgt cgggggcgcc gaagcccgcc gaagtgacgg
     3121 cctgccggat ctcggcgacg tccacgtggc cgcggaacgc gacctcgagc tcggtgccgc
     3181 ctcggaagtc ggtgccgagc cgcgccttgc cgagcgcgag cagcgcgatc gacccgatcg
     3241 tgatgatgag actcaggccg acgaaaaaga atcgccagcg catgaaatcg tagacttttc
     3301 cgctggagaa gaagcgcatg ttctagcctc gacgaaagct cgtgccgacc tcagccaagc
     3361 gccaggcgcc cttggcgtcc caagaaccgc acccagaggt cgaacatcac ccgggtcatc
     3421 gcgacgcccg tgaagaggct gcagacgacc ccgacgagca gcgccgccgc gaaccctttg
     3481 atcgggcccg tgccgtactg cgacagcacg acgccggcga tcacgctcgt gatgtggccg
     3541 tcgaagatcg cgctgaacgc ccgcttgtag ccgatttcga cggccgcgcg cggggtcttg
     3601 ccgaggtcga gctcctcacg gatgcgctcg ttgatgagca cgttcacgtc gacgctcatg
     3661 ccgatcgtga gcgcgaggcc cgcgatgccc ggcagcgtca tcgacgcgcc gaacgacgcg
     3721 aggatcgcga gctgcaagaa caggttcatg atcaccgcga tgtccgcgat gaagccggcg
     3781 cggttgtagt aaacgaccat gaagatcagc acgagcgcgc tgccgccgag cgcgccttgc
     3841 acaccgagat cgatcgagtc gcggccgagc gaggggccga tgcgctgctc gttcgacggc
     3901 gaaatcggag cgggaagcgc accggagcgc agcacgagct cgagctggcg cgcgctctgg
     3961 agctgcgctt cgggatcgct cgagcccatc gtgatctgag cgtggccgcc cggaatgcgc
     4021 gtctgaatca cgggcgcgct ctcgatccgg ccgtcgagga tgatggcgaa gcgccgcttg
     4081 atgttgtcgg ccgtgatgcg ttcgaagatg cggccgcctt gctccgtgaa ggtgagcgcc
     4141 acgtgccagc cgccgagcgc gccttgaccc tgctcgggct gcgcggccgc gtcgcgcacc
     4201 tgatcaccgg tgacctcggc gcgcgacttc aagaggtagg tgcggtagcc cacgtcctcc
     4261 tccttgagcg acacctgatc gaccgtcttg cgcacgagct cgaaaccgag ttcgcgatcc
     4321 ggcgggacgg gcagcgtggc ggcccattcc ttcaggcgct cgagcgtgtg ctgaatcggc
     4381 tccttgtcgc cctttttcaa gaacgcgtag gtgacgaggt tgtgcttgat gtcgccgctc
     4441 ttatcgaggc cgaccggcgc ctgctcgctc acgaactcga ggccctcggg caggctgtcg
     4501 gggctcgcgc tcgccttctc gcgcaccgtc ttcatgaagt cggagtcgtc gtcgagcagc
     4561 ttgaactcta gacgcgccgt ctggctgatg atgtcgcgga tgttggcgaa gctcttttcg
     4621 tcctcgcccg gcacttcgac gatgatgtcc tcgtcgcgcg tcgagacggc ggcttcgcgc
     4681 aggccgagct cgtcgatgcg gcgattgatg atttcgcgcg cttgtccgac ggcgcgctcg
     4741 cggatgccgc tctcgacgct cgagcggatg cggaactccc aattacgtcc gtcttggctg
     4801 cgcgtgtaag aaagctcggg gcggaagtgc tcgaggaagc gttcgtcgat cttcgaagg
//
LOCUS       DATIML010000347         2147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_71851, whole genome shotgun sequence.
ACCESSION   DATIML010000347 DATIML010000000
VERSION     DATIML010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71851"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1832)
                     /locus_tag="VLJ38_05985"
     CDS             complement(<1..1832)
                     /locus_tag="VLJ38_05985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39094.1"
                     /translation="MTSVAPKSAARRAVSALALKLWETQEALDTKVEQPAEVLDLLLM
                     ALGKGEDTAEAWDKLHESVVRNGQVADLALAYEHVATDKRIKLMQPEHQAHLHLRAAS
                     FFAEVLADAQGAAAAAERAIAAVPAHQEAFALLEELLAGPEGAGRLARHYFDASQRSA
                     EPAARLPLLRRAANLLASDRASGDLAVEVELQLFALDPADSGVRDDLMQRLIASGRHQ
                     QVVEILEASLKRDPSPAADEAKLLREQAMDICLGVLRDPQRALAHVEGLLVIDPAHVH
                     ARKVAEELVEHRQLGLRAAASLSTAYERTGEIDRAVAMLGFELKQVRGPRRVEVQRKL
                     GILRQDVLGDAAGALELIGPVVAGDPGDDDLRHRFVTLSLSLEQSAQAARLLSRALQT
                     SRDPAVRARVAADVGDVYLRSGDTGRATAAFQLATEFAADDRATLHAAKRLAELYHET
                     KEPAPLAAALELAIKLEPEREERQAMARRLARLIDQQPSEAARAATAWRALIGSPWNN
                     EALERLEVIYRDSGDEEGMADVLGLLAESAKDPEEARALAFRAADMRSRRPRDRAAAI
                     VAWLSLAERYGHSAAIDDRLLPLLEAEGRYGDVIALLERRSEHAA"
     gene            complement(1947..>2147)
                     /locus_tag="VLJ38_05990"
     CDS             complement(1947..>2147)
                     /locus_tag="VLJ38_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39095.1"
                     /translation="RAAGELLRKRRLTPERVAERIVSAAERGIAVVPVGFEAHALWWL
                     SRLTPTYMRSVFRVARRLGSRT"
BASE COUNT          319 a          736 c          756 g          336 t
ORIGIN      
        1 gccgcgtgtt cggagcgccg ctcgagcaga gcgatcacgt caccgtagcg cccttccgct
       61 tccagtagcg gcaagagccg gtcgtcgatt gccgcgctgt gcccgtagcg ctcggcgagc
      121 gacagccagg cgacgatggc cgcggcgcgg tcgcgcggtc gccgggagcg catgtcggcg
      181 gcgcgaaacg cgagcgcgcg cgcctcctcg ggatccttcg cggactcggc gagcaggccg
      241 agcacgtcgg ccatgccctc ttcgtcgccg gaatcgcggt aaatcacctc tagccgctcg
      301 agcgcctcgt tgttccacgg cgacccaatc agcgcgcgcc atgccgtcgc ggcgcgcgcg
      361 gcctcgctcg gctgctgatc gatgagccgc gctagccggc gcgccatggc ctggcgctct
      421 tcacgttccg gctcgagctt gatcgcgagc tcgagcgcgg cggcgagcgg agctggctct
      481 ttggtctcgt gataaagctc agcgagccgc ttggcggcgt ggagcgtcgc gcggtcgtcc
      541 gcggcaaatt cggtcgcgag ctggaacgcg gcggtcgcgc gccccgtatc gcccgaacgc
      601 aggtagacgt cgcccacgtc cgcggcgacg cgcgcccgta cggcaggatc gcggctcgtc
      661 tgcagcgcgc gcgacaggag ccgcgccgct tgcgccgact gttcgagcga gagactcagc
      721 gtgacgaagc ggtgccgcaa atcgtcgtcg ccgggatcgc ccgcgacgac ggggccgatg
      781 agctcgagcg cgcccgcggc gtctccgagc acgtcttgcc gcaagatccc gagctttcgc
      841 tggacctcga cgcgccgtgg cccgcgcacc tgcttgagct cgaagccgag catcgcgacg
      901 gctctgtcga tttcgccggt gcgctcgtac gccgtcgaga gcgaggcggc cgcgcgcaag
      961 ccgagctggc gatgctcgac gagttcctcg gcgactttgc gcgcgtgaac gtgcgccgga
     1021 tcgatgacga gcaaaccctc gacgtgagcg agcgcgcgct gcgggtcacg cagcacgccg
     1081 aggcagatat ccatcgcctg ctcgcgcaag agcttcgctt cgtcggcagc aggcgacggg
     1141 tcgcgtttga gagacgcctc gaggatttcg accacctgct ggtgccgacc cgaggcgatc
     1201 aggcgctgca tcaaatcgtc gcgcacgccg ctgtcggcgg gatcgagcgc aaacagctgc
     1261 agctcgacct cgacggccag gtcgcccgac gcgcgatcgc ttgcgagcag gttcgcggcg
     1321 cggcgcaaga gcggtaagcg agcggcgggc tccgcgctcc gctgactcgc gtcgaaatag
     1381 tgccgtgcaa gcctgccggc gccctcgggc cccgccagga gttcctcgag gagcgcaaag
     1441 gcttcctggt gcgcgggcac cgcggcgatc gcccgttcgg cggcggcggc ggcaccctgc
     1501 gcatcggcca gcacttccgc gaagaaggaa gccgcgcgca ggtgcaaatg cgcctgatgc
     1561 tcgggttgca tcagcttgat gcgcttgtcg gtggcgacgt gctcgtacgc gagggccaga
     1621 tcggcgactt ggccgttgcg cacgaccgat tcgtggagct tgtcccaggc ttcggcggtg
     1681 tcctcgccct tgccgagcgc catcaagagg agatcgagca cctccgccgg ttgctcgacc
     1741 ttggtgtcga gcgcctcttg ggtttcccag agtttgaggg caagggcgct cactgcgcgc
     1801 cgtgctgctg atttgggtgc gaccgacgtc atgattcaaa acgtccgaac ggcgcgggag
     1861 tggaattcac ccagggctag agtacaggat ccgcgtcgcg cttcgcctca tttgcgagag
     1921 cgattctcgg cgcgctgcgc aaatgatcat gtacgagatc cgagccgccg cgcgacccgg
     1981 aacacggagc gcatgtaggt gggcgtgagc cgtgacagcc accaaagcgc gtgcgcctcg
     2041 aatccgacgg gaacgacggc gattccgcgc tccgccgcgc tgacgattcg ttcggccacg
     2101 cgttccgggg tcagccggcg cttccgtaag agctccccgg ccgcccg
//
LOCUS       DATIML010000348         2424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3247181, whole genome shotgun sequence.
ACCESSION   DATIML010000348 DATIML010000000
VERSION     DATIML010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3247181"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VLJ38_05995"
     CDS             complement(<1..476)
                     /locus_tag="VLJ38_05995"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU39096.1"
                     /translation="MTDPTYSVVIPVYNEHETIPTLFERVRAVIDTFDAAAEVILVDD
                     GSVDDSWRMLEGLHERDPRFKCLSLSRNFGHQVAVTAGLDHARGKAIMVLDGDLQDPP
                     EVLPDLIRRWKDGYDVVYAVRTKRKENIFKRTAYALFYRLLKQLSDLDIPLDSGDF"
     gene            591..2111
                     /locus_tag="VLJ38_06000"
     CDS             591..2111
                     /locus_tag="VLJ38_06000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39097.1"
                     /translation="MEDARSSRFLRWVEVTAVGLAAACTLLRLAIDVKNGAGSLWWGE
                     RLAFAAGILRGYDLYPGAHTGVITGDVYGPMLAVFNLPAALVPTITGKMIAGELSSML
                     VMLLPLAVLVRRVTRTAGGARASFAVCMTLLTGVLAILPATEYQLSAIAADAPCLGLG
                     MWAFVVLTGAARPSYGRLAGGATLVALATLSKPNGAFMAFGVLLLVVYRAGFVKAVVF
                     GALYLALTAGLGVLVIRGTGSTLAGVWYNDVVIPSSQLVHHDLRYFIRGMGKLTLPMF
                     ALLAATVAPRFLPFGSAALKRYSWPPTAIELWLMAWILVPISYLGRAKIGGDVNSFHA
                     HYFAAAGTVIAWVPALVARGPRPLRALAFAALGLVAAPFGRGSVFGDWTDNTHERVFA
                     YLRAHADAYFPWHPLATLEATGQYLQQSDGVYSRTLAQRAPTREEFMAHAPRQPAFIG
                     LPHVGPYLPEDFVFTELVTRYYPGYALVPAPPPELAALRLQIFAPGPAVTKPLVPR"
     gene            complement(2086..>2424)
                     /locus_tag="VLJ38_06005"
     CDS             complement(2086..>2424)
                     /locus_tag="VLJ38_06005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39098.1"
                     /translation="GDAPPVEGDAPHVDGDAPPVSSPARPPEPAFESSPERPLLHAAV
                     AAMKLTSSVEPRTPRPRPKYPNMNPHFSIQRRAGGPASRNACHVTTSRKLGLLVLGQK
                     AFFTAERVVW"
BASE COUNT          351 a          812 c          819 g          442 t
ORIGIN      
        1 cagaaatccc cggaatcgag cggaatatcg agatccgaca gctgcttgag caaccgatag
       61 aaaagcgcgt aagccgtgcg cttgaagatg ttctctttgc gcttggtgcg gacggcgtag
      121 acgacgtcgt agccgtcctt ccagcgccgg atcagatcgg gcagcacctc cggcggatcc
      181 tgcaagtcac cgtcgagcac catgatggct ttgccccgcg cgtgatcgag ccccgccgtg
      241 accgcgacct ggtgtccgaa gtttcttgaa agactcaagc atttgaagcg aggatcgcgt
      301 tcgtggagcc cttcgagcat gcgccaggag tcgtcgacgc tgccgtcgtc gacgaggatg
      361 acctcggccg cagcgtcgaa tgtgtcgatc acggcacgaa cgcgttcgaa cagcgtcgga
      421 atggtctcgt gctcgttgta gacgggaatg acgacggagt aggtggggtc agtcactgat
      481 cggcccgccg actggatagc ataatggtgg ctcaaaaagt gcttgctcgg cggtcgcttc
      541 ggcggcaccg tggcccgacg ccccgtgccg gcgccggcac gaccccctcg atggaggacg
      601 cacggtcgag ccgttttctc cgctgggtcg aggtgacggc agtggggctc gcggccgcgt
      661 gcacgctgct caggctggcg atcgacgtga agaacggggc gggatcgctg tggtggggcg
      721 agcgcttggc attcgccgcc gggatcttgc gcggctacga tctgtacccg ggcgcgcaca
      781 ccggcgtcat caccggggac gtctacgggc cgatgctcgc ggtgttcaac ttgccggccg
      841 cgctcgtacc gaccatcacg ggaaaaatga tcgcggggga gctctcgagc atgctcgtga
      901 tgctgctgcc gctcgcggtg ctcgtccggc gcgtcacacg cacggctggc ggagcgcgcg
      961 cgtccttcgc cgtctgcatg acgctgctca cgggcgtgct cgcgattttg cccgccaccg
     1021 agtaccagct gagcgccatc gctgccgacg cgccgtgttt gggcttgggg atgtgggcat
     1081 tcgtcgtgct cacgggcgcc gcacgtccga gctacgggcg cctcgccggc ggcgcgacgc
     1141 tggtggcgct cgccacgctc tcgaagccga acggcgcgtt catggcgttc ggcgtgctct
     1201 tgctcgtcgt ctaccgcgcc gggttcgtga aagccgtcgt gttcggcgcg ctctacctcg
     1261 cgctcacggc aggcctcggc gtgctcgtca tccgcggcac gggcagcaca ctggccggcg
     1321 tctggtacaa cgacgtagtc atcccctcct cgcagctcgt tcatcacgat ctgcgctact
     1381 tcatccgggg catgggcaag ctcaccttgc cgatgttcgc gctcctcgcc gcgaccgtgg
     1441 cgccccgctt tttgccgttc ggaagcgccg cgctaaagcg ctacagctgg ccccccacgg
     1501 caatcgagct ctggctgatg gcctggatct tggtgccgat ttcgtacctg ggccgcgcga
     1561 agatcggcgg cgacgtgaac agcttccacg cacactactt cgccgcggcg ggcacggtga
     1621 tcgcctgggt gcctgcgctc gtcgctcgcg gacctcggcc gctgcgagcg ctcgcgttcg
     1681 ccgcgctcgg cctggtcgcg gcaccgttcg gccgcggcag cgtgttcggc gactggaccg
     1741 acaacacgca cgagcgcgtg ttcgcgtacc tgcgtgcgca cgctgacgcc tacttcccct
     1801 ggcatcccct cgcgacgctc gaagcgacgg gccagtactt gcagcaatcg gacggcgtct
     1861 acagtcgaac gctcgcgcag cgagcaccga cgagggaaga gttcatggct cacgcgccgc
     1921 gacaaccggc gttcatcggc ttgccgcacg tcgggccgta cctgcccgag gacttcgtgt
     1981 tcaccgagct cgtgacgcgt tactacccgg gctacgcgct cgtgccggcg ccgcccccgg
     2041 agctcgccgc gctccgcctg caaatcttcg cgccgggccc tgccgtcacc aaaccactcg
     2101 ttccgcggta aaaaacgcct tttggcccag cacgagtaag cccaacttgc ggctcgtcgt
     2161 gacgtggcac gcgtttcgtg acgcggggcc ccctgctctc cgctggatgc taaagtgggg
     2221 gttcatgttc ggatactttg gtcgtgggcg tggggttcgt ggttcgacgc tgctcgtgag
     2281 cttcatcgcg gcgacggcgg cgtgcagtag tggccgctcg ggagacgact cgaatgccgg
     2341 ctccggcggg cgcgccgggc tcgaaacggg cggggcgtca ccgtcgacgt gcggggcgtc
     2401 accttcgacc ggcggggcgt cacc
//
LOCUS       DATIML010000349         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3824056, whole genome shotgun sequence.
ACCESSION   DATIML010000349 DATIML010000000
VERSION     DATIML010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3824056"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..>1505)
                     /gene="thiC"
                     /locus_tag="VLJ38_06010"
     CDS             complement(158..>1505)
                     /gene="thiC"
                     /locus_tag="VLJ38_06010"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HSU39099.1"
                     /translation="GASPVSSSTDEEVEKLHFAERWGSDTVMDLSTGGDLDACRDAIV
                     RSARVPIGTVPIYSMIIGRRIEDLSVKDILDSILHQAKQGVDYFTIHAGVLREHLPYV
                     RKRLIGIVSRGGSLIAKWMLHHREQNPFYAHFDEICDIMREYDVSFSLGDGLRPGGLG
                     DATDEAQLRELETLGELTERAWRRGCQVMVEGPGHVPFDQIEYNMKLQRRLCHGAPFY
                     VLGPLVTDVFPGYDHLTSAIGATAAAYHGAAMLCYVTPKEHVGLPKKDDVKQGCVAYK
                     IAAHAADVALGIPGTRDWDDALTKARAALNWEKQFELAFDGDTARAFHDEDLAVDTDF
                     CAMCGHDWCSVRISREIQEFASGKAEGFEAGKARQSPALTPEQQRILEQRGVLSPDEI
                     HRLAGKTQRALGATAGERADCHSDKVEPDTARRIQDERLVQVRIPERTVDAVPPGE"
BASE COUNT          234 a          510 c          506 g          255 t
ORIGIN      
        1 cgaccggggg ctgcccggcg tagcgaaaga gcgcaccgca cgcccgcgcc accaggatca
       61 ccacgacgag cgcgaggagc acgtggaaga gcacgtcgtt cacgcgccgt tcgctccgtc
      121 ttctctcgct cgccgcgtta cccgccgtga cgctgcgcta ctcgccgggc ggcacggcgt
      181 cgaccgtgcg ctccgggata cgcacctgca cgagccgttc gtcttggatg cgccgcgcgg
      241 tgtcgggctc gaccttatcg ctgtgacaat cggcgcgttc gcccgccgtc gcgccgagcg
      301 cgcgctgggt cttgcccgcg agacgatgga tctcgtcggg ggagagcacg ccgcgctgct
      361 cgaggatgcg ctgctgttcg ggcgtgagcg cgggcgactg ccgcgccttg cccgcctcga
      421 agccttcggc cttgccgctc gcgaactcct ggatttcgcg cgaaatacgc accgaacacc
      481 agtcgtggcc acacatggcg caaaagtcgg tgtcgacggc gaggtcttcg tcgtggaacg
      541 cgcgcgcggt gtcgccgtcg aacgcgagct cgaactgctt ctcccagttg agcgcggcgc
      601 gcgccttggt gagtgcgtcg tcccagtcgc gcgtaccggg aatgccgagc gcgacgtccg
      661 ccgcgtgggc ggcgattttg tacgcgacgc agccctgctt cacgtcgtcc ttcttgggca
      721 gacccacgtg ctctttgggc gtgacgtaac agagcatcgc ggcgccgtgg taggccgccg
      781 ccgtggcgcc gatcgcgctc gtcaggtggt cgtagccggg gaacacgtcc gtcacgagcg
      841 gcccgagcac gtagaagggc gcgccgtgac agagccggcg ctggagcttc atgttgtatt
      901 cgatttggtc gaacgggacg tgaccgggac cctcgaccat cacctggcaa ccccggcgcc
      961 acgcgcgctc ggtgagctcg ccgagcgtct cgagctcacg cagctgcgct tcgtcggtcg
     1021 cgtcgccgag cccgccggga cgcaagccat cgccgagcga aaacgagacg tcgtactcgc
     1081 gcatgatgtc gcagatctcg tcgaagtgcg cgtaaaacgg gttctgctca cgatggtgca
     1141 gcatccattt ggcgatcagc gagccgccgc ggctcacgat gccgatcagg cgcttgcgca
     1201 cgtagggcaa gtgctcgcgc agcacacccg cgtggatcgt gaagtaatcg acgccctgct
     1261 tcgcttggtg gaggatgctg tcgaggatat ctttgacgct caaatcctcg atgcggcggc
     1321 cgatgatcat cgagtaaatc ggcacggtgc cgatcggcac gcgcgcgctt cgcacgatcg
     1381 cgtcacggca cgcgtcgaga tcgccgcccg tcgaaagatc catgacggtg tccgagcccc
     1441 agcgctcggc aaagtgaagc ttctcgacct cttcgtccgt gctcgacgac acgggcgaag
     1501 cgccc
//
LOCUS       DATIML010000350         5393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4981614, whole genome shotgun sequence.
ACCESSION   DATIML010000350 DATIML010000000
VERSION     DATIML010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5393
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4981614"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..814
                     /locus_tag="VLJ38_06015"
     CDS             <1..814
                     /locus_tag="VLJ38_06015"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HSU39100.1"
                     /translation="TATSQVATERHTLVLAEGTRRTSELALKRLLVGGLPRIFELARV
                     LRADEQGPLHEPEFTLLEWYRAFAGFEAVLADTERLVARVARRVRGRAELVLPDGRRV
                     DARPPFERLSVREAFRRHAGVADAAALAADDESRYFELLVGRVEPALERLTRPVFLLD
                     YPLSQAALARPSPRDPSVAERFELYAGGVELSNGYGELTDPVEQARRFRAERRARRAA
                     GRPTYPTDERFLAALREGMPPSSGNALGVDRLVMLVTGAKSIAEIVAFPAGT"
     gene            complement(832..1902)
                     /locus_tag="VLJ38_06020"
     CDS             complement(832..1902)
                     /locus_tag="VLJ38_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39101.1"
                     /translation="MTAAPPKLPPRRPPPPIPSSSSGGLAGSAAGDGVTPMSADQKEL
                     LTLQALGLMHEQVQARIVHYKSELATNAELDAITAQVVAQIEAMQSAAAEATGSRQSP
                     DEMEAQHIRAMSLLLAKVFSSDSQFTTRILKPLGRRVAKLFFESELHEKSKGDKDKTI
                     HHAEQGVYYVLSRYQRRLRAELEGFEYESAEMREASFELLEKLERDLRVAFLSRRSPE
                     LNQVMTVYAAVVSDFLRDYLPPRLEAMAKNTVRAALTARRANSVGYKVLADAFPAFRE
                     QWERVFMEQMVNCCGDELQLRLLQSGSAFKDETLRFFFDPHVYSDSAEVVCHELYDFL
                     CLEGFLDLPVNYRVSGAPHADG"
     gene            2113..2367
                     /locus_tag="VLJ38_06025"
     CDS             2113..2367
                     /locus_tag="VLJ38_06025"
                     /inference="COORDINATES: protein motif:HMM:NF013851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HSU39102.1"
                     /translation="MIESENIRTLLLAAFPGADIDLVDLTGTKDHYQARIVSPAFAGR
                     SLVEQHQLVYRALGEAMSGPIHALALKTYTPEAWAKVQPR"
     gene            2371..2682
                     /gene="grxD"
                     /locus_tag="VLJ38_06030"
     CDS             2371..2682
                     /gene="grxD"
                     /locus_tag="VLJ38_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HSU39103.1"
                     /translation="MEDTLRDRIKQTVEGAKVVLFMKGTRNFPQCGFSAKVVGILKEQ
                     GVEFRDVNILSDQDLRQGLKEYSNWPTFPQLYVGGKLVGGCDIVTSMHESGELGAVLG
                     K"
     gene            2683..3432
                     /gene="surE"
                     /locus_tag="VLJ38_06035"
     CDS             2683..3432
                     /gene="surE"
                     /locus_tag="VLJ38_06035"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HSU39104.1"
                     /translation="MKRPLVLVANDDGYRARGLGLLAQALRPLADVVVCAPEVEQSAA
                     SHALSLHRPLRLFSHGEQVFSVDGTPADCVYVALHAEQRVLPRRPDVVVSGVNHGVNL
                     GDDVFYSGTVAAAREGALKGIPSLAVSAATDADLQAAALLGARLTLALASIGTRGMLV
                     NVNVPKGSGWPLRATRLGRRIYRDEVEFRRDPRGREYLWIGGPGAAHEPVAGSDTEAF
                     DAGEVGITPLVLDLWHREASLEAERLAAAVR"
     gene            3448..4110
                     /locus_tag="VLJ38_06040"
     CDS             3448..4110
                     /locus_tag="VLJ38_06040"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002636.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HSU39105.1"
                     /translation="MAARKGSFAKPNKPVLARPLPTPRGVDSKKGTPAPKLVSRSAPQ
                     ELEPLRYVRGFIREIPDFPQPGILFRDITPLLADPKAFHIVLDAIAHHFVGERVDAVV
                     GVESRGFIFGGALAARLNASFVPIRKPGKLPYRTDKVSYSLEYGEAELEMHRDSLREG
                     SAVLVVDDLLATGGTAAAAGELVHRQGAFVLAYAFVIELVSLGGRERLLPTPATSIVQ
                     FD"
     gene            complement(4123..5016)
                     /locus_tag="VLJ38_06045"
     CDS             complement(4123..5016)
                     /locus_tag="VLJ38_06045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39106.1"
                     /translation="MLQRSAALRMAPDPNIVGRLFPASCQTNVNDAAQTVTLSFSGSG
                     FAWTPVAGRIAFSVMASVEYRMDFYLADDAVYIYARPARTVLGPTFQVTSVENRLVNW
                     AAQGPAGYLVNSFGGQIVSGELASGFTVVHADDGDAFSLGILSPPARPPQPFNTSKHR
                     YAMANETSEVHTDQLDLVGPLTVAKSDQALFVRLAVVGPPVDVLLIRRGTGDLWRQGL
                     QNGLALAPPPEAPISSFALSPGPELRQRFPLPSGQYYLAVDNSARVGATTPPFSPLGA
                     LGQNTALVSVAVELGDSDDEF"
     gene            complement(5181..>5393)
                     /locus_tag="VLJ38_06050"
     CDS             complement(5181..>5393)
                     /locus_tag="VLJ38_06050"
                     /inference="COORDINATES: protein motif:HMM:NF012964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HSU39107.1"
                     /translation="AKQSGVARVVVAPFGFLTEHVETLYDLDIEARAQAEGLGLVWKR
                     VPALGHAEGLIEALAKAVSRALGVRS"
BASE COUNT          915 a         1843 c         1766 g          869 t
ORIGIN      
        1 caccgcgacc tctcaggtgg cgaccgaacg ccacacgctg gtgctcgccg agggcaccag
       61 gcgtacctcc gagctcgcgc tcaagcggct gctcgtgggc gggttgccgc gcatcttcga
      121 gctcgcgcgg gtgctgcgcg ccgacgaaca agggccgctg cacgagccgg aattcacgct
      181 gctcgagtgg taccgcgcgt tcgcgggctt cgaggcggtg ctcgcggaca ccgagcggct
      241 cgttgctcgc gtcgctcggc gcgtgcgcgg gcgcgccgag ctcgtgctgc ccgacggccg
      301 gcgcgtcgac gcgcgtccgc ccttcgaacg tctctcggtg cgcgaagcgt ttcgccgcca
      361 cgcgggcgtc gcggacgcag cagcgctcgc cgccgacgac gagtctcgct atttcgagct
      421 cttggtcgga cgcgtcgagc cggcgctcga aagactcacg cggcccgtgt ttttgctcga
      481 ttacccgctc tcgcaagccg cgctcgcgcg cccctccccc cgcgacccga gcgtcgccga
      541 acgcttcgag ctctacgcgg gcggtgtcga gctctcgaac ggctacggcg agctcaccga
      601 tcccgtcgaa caagcacggc gtttccgcgc cgaacgccgg gcgcgccgcg ccgcggggcg
      661 ccccacctac ccgaccgacg agcgcttcct cgccgcgctg cgcgaaggca tgcccccctc
      721 gagcggcaac gcgctcggcg tcgatcggct cgtcatgctc gtgacgggcg ccaagagcat
      781 cgccgagatc gtcgcgtttc cagcagggac ctgagcgcgt ggaccgcgag gtcaaccgtc
      841 ggcgtgcgga gcgcccgaga cacgatagtt cacgggcaaa tccaaaaatc cctcgaggca
      901 caggaagtcg tagagctcgt gacagacgac ctcggcgctg tcgctgtaca cgtggggatc
      961 gaaaaagaac cgaagcgtct cgtctttgaa cgcgctgccg ctctgtagga ggcgcagctg
     1021 gagctcgtcg ccgcagcagt tcaccatctg ctccatgaac acgcgctccc attgctcccg
     1081 gaacgcgggg aacgcgtcgg ccagcacttt gtaaccgacg ctgtttgccc gccgcgccgt
     1141 cagcgccgca cgcaccgtgt tcttcgccat cgcctcgagc cgcggcggca ggtagtcacg
     1201 caaaaaatcg gacacgacgg ccgcgtacac cgtcatcacc tgattcaact cgggggagcg
     1261 tcgcgacagg aacgcgacgc gcaagtcgcg ctcgagcttt tcgagcagct cgaagctcgc
     1321 ttcccgcatc tctgcgcttt cgtactcgaa gccctcgagc tcggcgcgca ggcgccgctg
     1381 gtagcgactg agcacgtaat agacgccctg ctcggcgtga tggatggttt tgtctttgtc
     1441 gcccttgctc ttttcgtgga gctcgctctc gaaaaagagc ttcgcgacgc gtcgaccgag
     1501 cggcttcagg atgcgggtcg taaattgcga atcggacgag aacaccttgg cgagcaggag
     1561 cgacatggcc cggatgtgtt gcgcttccat ctcgtccggg ctctggcgac tgccggtcgc
     1621 ttccgccgcc gcgctttgca tcgcctcgat ctgcgcgacg acctgcgccg tgatggcatc
     1681 gagctctgcg ttcgttgcga gctcgctctt gtagtggacg atgcgcgcct ggacctgctc
     1741 gtgcatcaga ccgagcgcct gcagcgtcag cagctccttc tgatcggcgc tcatgggcgt
     1801 cacgccgtcg ccggcagccg accccgcgag gccgcccgag ctcgaggacg gtatcggcgg
     1861 cggtggacgc cgtggcggca gttttggcgg agcggcagtc aacgcgcggc catcctagcc
     1921 tcgttgccga gcgttctcac cacgaacggg tcaagcttgg aaaaccccgt tttcggggct
     1981 ggggccccga aaacagacaa aacggcgccc cgaaaaacag acaagacggc gccccgaaaa
     2041 cacacaagac ggcacaagac ggcgatcggc gcacgttgac agacgctttt tcgtgcgcca
     2101 atgaaagggg caatgatcga gtccgagaac atccgaacgc ttttgctcgc ggcattcccc
     2161 ggcgcggaca tcgacctcgt cgatctcacc gggaccaagg atcactacca ggctcgcatc
     2221 gtttctcctg cgttcgccgg ccgctcgctc gtcgagcaac atcagctcgt ttatcgcgcg
     2281 ctcggtgagg ccatgagcgg ccccatccac gcgctcgctc taaaaacgta cacgcccgaa
     2341 gcgtgggcaa aggttcaacc gaggtaacag atggaagata cgctgcgcga tcgcataaag
     2401 cagaccgtcg aaggcgccaa agtcgtgctc ttcatgaagg gcacgagaaa cttcccgcag
     2461 tgcggcttct ccgccaaggt cgtcgggatc ttgaaagaac aaggcgtcga gtttcgcgac
     2521 gtgaacatcc tcagcgacca ggacctgcgg cagggtctca aggagtattc gaattggccg
     2581 acgttcccgc agctctacgt cgggggtaag ctcgtgggcg gttgcgacat cgtgacgagc
     2641 atgcacgaaa gcggcgagct cggcgccgtc ctcggaaagt agttgaaaag gccgctcgtc
     2701 ctcgtcgcga acgacgacgg ttaccgcgcg cgcggcctcg ggctcctggc gcaagcgctg
     2761 cggccgctcg cggacgtggt cgtgtgcgcg ccggaggtcg agcagagcgc cgcgagtcac
     2821 gcgctcagct tgcaccgacc gctgcgcctg ttctcccacg gcgagcaggt gttttcggtc
     2881 gacggcacgc ccgccgactg tgtgtacgtg gcgctgcacg ccgagcagcg ggtcttgccg
     2941 cgccgccccg acgtcgtcgt gtcgggggtg aaccacggag tgaacctcgg cgacgacgtt
     3001 ttctacagcg gcaccgtcgc ggccgcgcgt gaaggtgcac tcaaaggcat cccgtcgctc
     3061 gccgtctcgg cggccacgga tgccgacctc caagccgcgg ccctgctcgg ggcgcggctc
     3121 acgctagcgc tcgctagcat cggcacccgc ggcatgctcg tgaacgtcaa cgtgccgaag
     3181 ggcagcggtt ggccgctgcg cgcgacgcgg ctcggccggc gcatctatcg cgacgaagtc
     3241 gagtttcggc gcgatccgcg cggccgcgag tacctctgga tcggcgggcc cggcgccgcc
     3301 cacgagccgg tcgccggctc cgatacggag gcgttcgacg ccggagaggt cggaatcacg
     3361 ccgctcgtgc tcgatctttg gcatcgcgaa gctagcctcg aagcggagcg gcttgcggcc
     3421 gccgttcgat aagggcacaa gggggcaatg gctgctcgca aaggttcgtt cgccaagccg
     3481 aacaaaccgg ttctggctcg cccgctgccc acaccccgcg gcgtagacag caaaaagggc
     3541 acgcccgcac ctaagctcgt ctcgcgttcg gctccccagg agctcgaacc gctgcgctac
     3601 gtgcgcggct ttatccgcga gatccccgat tttccccagc ccggcattct gtttcgcgac
     3661 attacgccgc tcctcgccga tcccaaagcg tttcacatcg tgctcgacgc catcgcacac
     3721 cacttcgtgg gcgagcgcgt cgacgccgtg gtcggcgtcg agtcgcgcgg cttcatcttc
     3781 ggcggagcac tggccgcgcg cttgaacgcg agcttcgtcc ccatccgcaa acccggcaag
     3841 ctcccctacc gcacggacaa agtttcctat tcactcgagt acggcgaagc cgagctcgag
     3901 atgcatcgcg attcactgcg cgaaggcagc gccgtgctgg tggtcgatga tttgctcgcg
     3961 acgggcggta ccgccgcggc tgcgggcgag ctcgtgcacc gccaaggtgc gttcgtgctc
     4021 gcctatgcct tcgtcatcga gctcgtttcg ctgggcggac gcgagcggct gctgccgacc
     4081 ccggcgacca gcatcgtgca gttcgactga gcgacagcgc cgttagaact cgtcgtccga
     4141 atcgccgagc tcgacggcca cggagacgag cgccgtgttc tgaccgagcg cgccgagcgg
     4201 gctgaacggc ggggtcgtcg caccgacgcg ggcgctgttg tcgacggcga gataatactg
     4261 gccagagggc agcggaaagc gctggcgcag ctcgggtccg ggactgagcg cgaacgagga
     4321 gatcggcgcc tcgggcggcg gcgccagtgc cagaccgttc tgcagaccct gccgccaaag
     4381 gtcgcccgtc ccgcggcgga tcaaaagcac atcgaccggg ggtcccacga ccgcgagccg
     4441 tacgaagagc gcctggtcgc tttttgccac agtgagcggg ccgacgagat cgagctggtc
     4501 ggtgtggacc tcgctcgtct cgttggccat ggcgtagcgg tgtttggacg tgttgaacgg
     4561 ctgcggcggc cgggcgggcg gcgaaaggat gccgagcgag aacgcatcgc catcgtcggc
     4621 gtgcacgacc gtgaaccccg aagcgagctc gcccgatacg atctggccgc cgaagctgtt
     4681 cacgaggtaa ccggccggtc cctgcgcggc ccaattcacc agccggtttt cgaccgaggt
     4741 cacttgaaac gtcgggccga gcacggtccg cgcgggccgc gcgtagatgt agacggcgtc
     4801 gtcggccaga tagaaatcca tgcggtactc gacgctcgcc atcacgctga acgcgatgcg
     4861 ccccgcgacg ggcgtccacg caaacccgct gcccgaaaac gagagcgtca ccgtttgcgc
     4921 cgcgtcgttg acgttcgtct ggcagctcgc cgggaacaga cgcccgacga tattcggatc
     4981 gggcgccatc ctgagcgccg ccgaacgttg cagcatttcc gggcacaagc gcccggcgcc
     5041 gaaattggag aacaaccacc agcggagctg ggggctcgcg ttgactggac ctttgaagag
     5101 cgaacaaccg agcgcagaac acgcagcgag cccgacaacg gccgagcgaa agccgctgcg
     5161 ggcatgctgc gcgctgaacc tcacgaacgc accccgaggg cccggctcac ggctttggcc
     5221 agcgcttcga tcaagccttc ggcgtgaccc agcgcgggca cgcgtttcca gacgagcccg
     5281 agcccttccg cctgcgcgcg cgcctcgata tcgagatcat aaagtgtctc gacgtgctcg
     5341 gtcaggaacc cgaacggcgc gacgacgacg cgagcgacgc cgctttgctt cgc
//
LOCUS       DATIML010000351         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3824421, whole genome shotgun sequence.
ACCESSION   DATIML010000351 DATIML010000000
VERSION     DATIML010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3824421"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /locus_tag="VLJ38_06055"
     CDS             complement(<1..493)
                     /locus_tag="VLJ38_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39108.1"
                     /translation="MQELDETTEARFIERLIAHDERAFIELVQAYEQRVFRLLLRMLG
                     RRDEAEDMAQEVFVQVFKAIGTFRGDSRLGTWIYRIAVNLCKNRMKYLSRRHTAEQDE
                     LEPAAGRLPLNEAKGVTFGETTRPDQLVEGFQLERVVQACIAELEPDFREVLVLRDVE
                     DLTY"
     gene            932..1279
                     /locus_tag="VLJ38_06060"
     CDS             932..1279
                     /locus_tag="VLJ38_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39109.1"
                     /translation="MTTVVSACSFAPFYDSTAADGARITRYAVALDQIPADFFADPDG
                     VWSFEGLAEAAGFALDAGVAIGALRRSFNGHPAGSAVVTLNAASRPYVAVIECPIAFT
                     CSDGERKHAASAA"
     gene            complement(1413..>1615)
                     /locus_tag="VLJ38_06065"
     CDS             complement(1413..>1615)
                     /locus_tag="VLJ38_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39110.1"
                     /translation="GGKLKAVLTETLNQNLAPIRERRARYAADPTYVLEVLRKGIARA
                     REEAAITLKQVRTAMNMDHGLD"
BASE COUNT          258 a          553 c          516 g          288 t
ORIGIN      
        1 cgtacgtgag atcctcgacg tcgcgcagca ccaagacctc gcgaaaatcc ggctcgagct
       61 cggcaatgca cgcctgcacc acgcgctcga gctgaaagcc ttcgaccagc tgatcgggcc
      121 gcgtcgtctc tccgaacgtc acgcccttgg cttcgttgag cggcaagcgc cccgcggccg
      181 gctcgagctc gtcttgttcg gcggtgtgcc gccgtgacag atacttcata cggtttttgc
      241 agagattgac cgcgatgcga taaatccaag tgccgagccg cgaatcgcca cggaacgtgc
      301 cgatcgcctt gaacacctgc acgaacacct cttgcgccat gtcctcggct tcgtcgcgcc
      361 ggccgagcat gcgcaagagc aaccgaaaga cccgctgctc gtacgcttgc acgagctcta
      421 tgaacgcgcg ctcgtcgtgg gcaatcaagc gctcgatgaa gcgcgcttcc gtcgtctcgt
      481 cgagctcctg caacttcacg ccttggtcgg caccaaaata gaccgccccg cccgccgcgt
      541 cgcggccaga cgcgggcggc ggccggacgc ccgggggctc cagacgggcg agcagccgaa
      601 gtgccacctc gaagcgacag caaaagcccc cgcggagttc cgcccggcgc ctccgaacgg
      661 tttggcaacc tcgtgcggca aacgcgcgct ctcttgcgca agcgctcccg ctcggcgtgg
      721 aacggttcgc tcctcctccg tcccaccccg cgccccagcg gtcgcctcaa tcaaagaccc
      781 tagaaccgag gcgcggcagc gtgatcgaac gcgtcccctc gagaccgatg aacgcgcggg
      841 gcgcgcgtag gggctaagcc tccgaaataa ttgtcggttt atgaattaac tgttcctctg
      901 ttcagtggtc tggtaccgag ggggggaggc catgactacc gtcgtttctg cctgctcctt
      961 cgctccgttt tacgacagca ccgccgctga tggcgcgcgc atcacgcgct acgccgtcgc
     1021 gctcgaccaa atcccagccg acttctttgc cgaccccgac ggggtctgga gcttcgaagg
     1081 gttggctgaa gccgcagggt tcgcgctcga cgcgggcgtg gccatcgggg cgctccggcg
     1141 ttcattcaac gggcatccgg cgggctcggc cgtggtcacg ttgaacgcgg catcgcggcc
     1201 gtacgtcgcc gtgatcgagt gtccgatcgc cttcacgtgt agcgacggcg aacgcaagca
     1261 cgcggcgtcc gccgcttagg catcgacttg gggggcgccg cggcggcgag agggatcgcg
     1321 cgccggggcg gagcgcgatg tcgtcgcggc gccttctagc tatcctcgac cgccggctcg
     1381 aaaagttcgg cgtggcgacg caagctgcgc gctcagtcga gtccgtggtc catgttcatc
     1441 gctgttcgca cttgcttcag cgtgatggcg gcctcttctc gcgcccgtgc gatgcccttg
     1501 cgcagcacct cgagcacgta ggtgggatcg gcggcatacc gtgcgcggcg ctcgcggatg
     1561 ggagcgaggt tttggttcag cgtttcggtg agcacggctt tgagcttgcc accac
//
LOCUS       DATIML010000352         3504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_72493, whole genome shotgun sequence.
ACCESSION   DATIML010000352 DATIML010000000
VERSION     DATIML010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3504
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72493"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..909
                     /locus_tag="VLJ38_06070"
     CDS             <1..909
                     /locus_tag="VLJ38_06070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39111.1"
                     /translation="DRCDALLPLMTRIARLRSTTLLLFVAPGALALACSSDGTLPPGD
                     DFGAGMTGGSGAVGGTSGNGHAGTPSSATGGSGATSSGGQGVGTGGTGTFGTGGTSAL
                     GGGTAVGGSSATGGGAGHAASGSGGTFGAAGTFGSGGTFGTGGTFATGGTPSGGSGPV
                     GAGGRGSMGFGGRSSGGAGGARAGAAGTGVGGAGSSVAFSQVAAIVQAQCGKSTCHGG
                     RQTPSLTSSNLTTLYNTLTSTTVRQCGSDHLVTKNDTANSALLELPQGTCSNFIMPQG
                     CTKTPCLASADMTTITNWINAGAPGP"
     gene            complement(947..2068)
                     /locus_tag="VLJ38_06075"
     CDS             complement(947..2068)
                     /locus_tag="VLJ38_06075"
                     /inference="COORDINATES: protein motif:HMM:NF012925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 16 protein"
                     /protein_id="HSU39112.1"
                     /translation="MNGGGPTDAAEQAGTRNAAGAVAIGHAGAGGANPSGGTSAAGGP
                     SAPSGAGGQPNASAAGGKAGTGSALSGAGGVRGGRGGRGGMSGGAANASGKSGTGGAG
                     GSSGTGTTNSEGSAGAGDISVPAGYTLVWHDEFDVDGPPNPKNWKFETGFVRNEEDQW
                     YQTANASVADGLLVIEARKERVQNPNYTGSGDWKTSRQYAEYTSSSIDTSGLQSWQYG
                     RFELRARVPTVAGMWPAWWTLGVSGEWPSNGEIDIMEYYGGNVHANVACGTSTRWQAK
                     WDSATKSLSSLGASWSSDFHVWRMDWDDQTITLSLDDQTLNTTALSSMLNPDGSSPFK
                     QKAYMLVNLALGGSNGGSLDATTFPQRYEVDYVRVFQKN"
     gene            2401..3066
                     /locus_tag="VLJ38_06080"
     CDS             2401..3066
                     /locus_tag="VLJ38_06080"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU39113.1"
                     /translation="MALAVVTGANRGIGLALVELLKQREVDVIGVCRESSPELARLGA
                     EIVDAVDVTDDGGIERVVRAVGGREIQLLVNNAGIMHFPETLDQLDPSAIRLQFEVNA
                     LAPLRITAALRGRLARGSKVGLVTSRMGSIDDNGSGGAYGYRMSKAALNMAGKSLAVD
                     LKPSGVAVAILHPGMVRTRMTGSHGQVEPLDAARGLLARLDELTLETTGGFWHANGQR
                     LPW"
     gene            3066..3431
                     /locus_tag="VLJ38_06085"
     CDS             3066..3431
                     /locus_tag="VLJ38_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39114.1"
                     /translation="MAAERFARVPALVAALFLASTCQRTNDGSAAVPRVDNHPPAQTS
                     DGRTVGADDKSPQHLLAEQGTSSHPAPGWKIGPNGVSYDPKRSPDEAKGATKILLPDA
                     GVETVPPAAAPVVAPVPEE"
BASE COUNT          527 a         1228 c         1161 g          588 t
ORIGIN      
        1 gatcgctgcg acgcactctt acctttgatg acgcgtattg cacgcctgcg gtcgacaaca
       61 ctcctcttgt tcgtggcgcc cggtgccttg gcgctcgcgt gtagctcgga cggtacgctg
      121 cctcccggcg acgatttcgg agccgggatg acgggcggct cgggcgccgt agggggcact
      181 tccggcaacg gccatgcggg tacgccgagc tcggcgacgg gcggcagcgg cgctaccagc
      241 tcgggtggcc aaggcgtggg aacgggcggt acgggaacgt tcggcaccgg cggcacttcc
      301 gcgctcggcg gcggcacagc ggtcggcggc tcgtccgcaa ccggcggagg tgccggccac
      361 gctgcgagcg gtagcggcgg cacgttcggt gctgctggca cgttcggtag cggcggcaca
      421 ttcggtaccg gcggcacatt cgctactggc ggtacgccga gcggcggcag cggccccgtt
      481 ggcgcaggcg gtcgcggcag catgggcttc ggcggtcgaa gtagcggcgg cgcaggcggt
      541 gctcgtgcgg gcgctgccgg gacgggcgtc ggcggtgccg gcagcagcgt tgctttcagc
      601 caagtggcgg cgattgtgca agcgcagtgc ggcaagtcga cgtgtcacgg cggcagacaa
      661 accccgtcgc tcaccagcag caatctcacg accctctaca acacgctgac gagcaccacg
      721 gtacgccagt gcgggagcga ccacctcgtc acgaagaacg acaccgccaa cagtgcgctg
      781 ctcgagctgc cacagggcac gtgcagcaac ttcatcatgc cgcagggctg cacgaagaca
      841 ccgtgcctag cgtccgccga catgacgacg atcacgaatt ggatcaacgc gggcgcgccg
      901 ggcccatagc tctggtcgac tgctacgggc aggccgtccg tctcgttcag ttcttctgga
      961 acacgcgcac gtagtcgacc tcgtagcgct gcgggaacgt cgtggcgtcg aggctgccgc
     1021 cgttcgagcc gccgagcgcg agattcacga gcatgtacgc tttttgtttg aaggggctcg
     1081 agccgtccgg gttcagcatg ctcgagagcg ccgtcgtgtt gagcgtctga tcgtcgaggg
     1141 acagcgtgat ggtttggtcg tcccaatcca tgcgccaaac atggaaatcc gacgaccagc
     1201 tcgcgccgag cgacgacaaa gacttcgtgg ccgaatccca cttcgcttgc cagcgagtgc
     1261 tcgtgccgca agcgacgttc gcgtgcacgt tgccgccgta gtattccatg atgtcgattt
     1321 cgccgttcga cggccactcg ccgctcacgc cgagggtcca ccacgcgggc cacatgcccg
     1381 ctacggtcgg gacgcgcgca cgtagctcga agcgtccgta ctgccagctc tgaagtccgc
     1441 tcgtgtcgat gctcgacgag gtgtactcgg cgtactgtcg gctcgtcttc cagtcgccgc
     1501 tcccggtgta gttcggattt tgcacgcgct ccttgcgcgc ctcgatcacg agcaggccgt
     1561 ccgcgacgct cgcgttggca gtctggtacc actggtcttc ttcgttccga acgaagcccg
     1621 tctcgaattt ccaatttttg ggattgggcg gaccgtcgac gtcgaactcg tcgtgccaga
     1681 cgagcgtgta acccgcggga acgctaatgt cgcccgcacc ggcgctgccc tcggagttcg
     1741 tggtccccgt cccgctcgag ccgcccgccc cgccggtgcc gctcttgccg ctcgcattcg
     1801 ccgcgccgcc gctcatgccg ccgcgccctc cgcgtccgcc tcgcacgccg cccgctccgc
     1861 tcagcgcgct gccggtgccc gccttaccac ccgcggcact cgcgttcggc tggccacccg
     1921 ctccgctcgg agcgctcggt ccgccggctg cgctcgtgcc gccgctcggg tttgcgccgc
     1981 ccgcgccggc atgaccgatg gccaccgcgc ccgcagcgtt cctggttcca gcttgctctg
     2041 ctgcgtcggt cggcccgccg ccgttcacgt tcctaccccc ggtgccccct cgtgttgcgt
     2101 cctcgctcga actgcacgct gcgagcagcg ttgctccggc aaaggctgca cgcgagaggc
     2161 gtgtcgcgaa gaaacggtta gcggtcgtcc gactcaacgc tctaataccc tcacgcgggc
     2221 gggtcttcgg tgcgctagcg cctgtcgcgc gagcgcgggc gaagcttacc actctttggc
     2281 gcgcccgcga cccggtcgaa ggtgccgctt cagccctcgc gggacgccga accagcgttg
     2341 aagcgaaatt cgcacgctcg cgctcttgcg cccgagtgcg agcgaaccca tggctaaggc
     2401 atggcgctag cggtcgtaac gggagccaat cggggaatag ggctagcgct cgtggagctt
     2461 ctgaaacaac gcgaggtcga cgtgatcggc gtttgccgcg agagctcgcc cgagctcgcc
     2521 cgactcggcg ccgaaattgt ggacgcggtc gacgtgacgg acgacggtgg catcgagcgc
     2581 gtcgtgcgcg cggtcggcgg ccgggagatc cagctgctcg tcaacaacgc tggcatcatg
     2641 cactttcccg agacgctcga ccaactcgat cccagcgcga tccgcctgca gttcgaggtc
     2701 aacgcactcg cgccgctgcg cattacggcg gcgctgcgcg ggcgactcgc gcgcggctcg
     2761 aaagtcgggc tcgtcacgag tcgcatgggg tcgatcgacg acaacggttc gggcggagcg
     2821 tacggttatc gcatgagcaa ggcggcgctc aacatggcgg gcaagtcgct tgccgttgat
     2881 ctcaagccgt cgggcgtcgc ggtggccatc ttgcacccgg gcatggtgcg cacgcgcatg
     2941 accggctcgc acggtcaggt cgaaccgctc gacgcagccc gcggattact cgctcggctc
     3001 gacgagctca cgctcgagac gaccggcgga ttctggcacg ccaacggaca aaggttgccc
     3061 tggtgatggc cgccgaacgc ttcgctcgcg ttccggcgct cgttgcggcg ctctttctag
     3121 cgtcgacttg ccagcgcacg aacgacggca gcgctgccgt tccccgcgtc gataaccacc
     3181 cgcccgccca gacctccgac ggccgcaccg tcggagccga cgacaaatcg ccccagcatc
     3241 tgctcgccga gcagggcacg tcgtctcacc ccgctcccgg ttggaagatc ggtccgaacg
     3301 gcgtctctta cgacccgaag cgttcccccg acgaagcgaa aggcgcgacg aagatcctgc
     3361 tccccgacgc cggtgtcgag acggtgccac ccgccgccgc ccccgtcgtc gcgccggttc
     3421 cggaagagtg agtccgttcg atcgcgcagc gacggttcga agcaacgcgc gagcccgagg
     3481 tgcgccctag gctgacccct agta
//
LOCUS       DATIML010000353         3574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2669930, whole genome shotgun sequence.
ACCESSION   DATIML010000353 DATIML010000000
VERSION     DATIML010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3574
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2669930"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            486..1319
                     /locus_tag="VLJ38_06090"
     CDS             486..1319
                     /locus_tag="VLJ38_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HSU39115.1"
                     /translation="MVAAAHLLPSDFEAKPFVKWVGGKRQLLPAILKHVRLAEGAVYH
                     EPFVGGGAVFFHRQPKRAFLTDSNARLIRTYRGIKQDVEGVIRLLRSYPHDKGFYLEM
                     RARDIDAESDVAIAAWFIYLNRTGYNGLYRVNSKNGFNVPFGDYKNPTICDADNLRAC
                     SRALRGARIEKRDFASVVARAKRGDFVYFDPPYIPLTATSKFTDYTSEGFSDADQVRL
                     RDVAVELKRRGVSVLLSNSSAPRVYDLYSAHFECVEVDARRSVNCNPNGRGRIPELLI
                     R"
     gene            1321..1719
                     /locus_tag="VLJ38_06095"
     CDS             1321..1719
                     /locus_tag="VLJ38_06095"
                     /inference="COORDINATES: protein motif:HMM:NF042873.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease superfamily protein"
                     /protein_id="HSU39116.1"
                     /translation="MSGRGTAPSGGDALELAVANLAQRLGLEVRRQVKVGRRLWGAER
                     RIDVVVTEPTSRRRLGLECKFQGVPGTAEEKIPTTIQDISAWPIPGLVVFSGEGFSPY
                     MRSLLIASGRSVELEDLEAWLRLFFGLPLD"
     gene            complement(1777..2895)
                     /locus_tag="VLJ38_06100"
     CDS             complement(1777..2895)
                     /locus_tag="VLJ38_06100"
                     /inference="COORDINATES: protein motif:HMM:NF013504.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 6 protein"
                     /protein_id="HSU39117.1"
                     /translation="MASSIGVFHFFGSSSRLHAGLALRSLALAGVLGAFVACGGSQAQ
                     SPAGAPANAALAPDNDNGPPDDAPITEAPTPPKATGNPLKGIKLWIDPETNAALRADA
                     LDKTQPDVAKLFREKIAKYSQALWLGEWNSNVYRKVKWTVDQSSAKSEVPTFILYNVP
                     GRDCGQHSAGGLKTKESYQRWVRKVAAGIGDRSAIIILEPDALGLLEKENCLTKEQQA
                     ERVFLLHDAIKVLRQNPKTIVYLDGGHSRWHPVEEEARLLKMAGVEDANGFALNTSNY
                     RAMDELLPFGKKLSALLGGAHFVIDTSRNGAGPYGTEWCNPPGRKLGLPPTTDTDDPN
                     IIDAYLWLKRPGESDGACNGGPQAGAFWDKQAIELASP"
     gene            complement(2972..>3574)
                     /locus_tag="VLJ38_06105"
     CDS             complement(2972..>3574)
                     /locus_tag="VLJ38_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39118.1"
                     /translation="RFSRTPFTQAFWMTAPAEIPRAELFEQHALPPVQYVRRDWAAPV
                     LLAMFANKGVTRCYGVDPNFMPSAVPVEAPEYRGLAFVLGEGAARVTEWTPNHAVVEV
                     SGARPGDLLVYDMNYDASWRADGEPALDADGLVATRLTAATERVTFRYFPRTLRFSLP
                     LLFLTLLACFGRPAWRLASRTRFGAVLFRFERFFDRKRRH"
BASE COUNT          612 a         1188 c         1199 g          575 t
ORIGIN      
        1 cgtgagcttc ggcacgaacg tggcggcgtc acgcgtgaaa gattgcgcaa tttcgggcgt
       61 ccagtagccc caaacttcga cgcgcagcga cgactgcggg gaacccgtcg tgcgaaagcc
      121 cgccacatcc gtgccgacgt ccgagggcat gaatcctgcg ccgggcatcc gtctaccgta
      181 gcttgcgcga ccgcacgcag ctacgcgccg agagtaaccg cgagtgcgcg catgtggtcg
      241 agcgctgcga agcgcgacca gcgccgagcg cgaccagcgc cgagcgcgag cgtggtcacg
      301 gcgagcgccg aaggcgagcg tctcgaaacg agaggcgtga cgccatccgc gcggtggggc
      361 cccgcggagc acgtgcaagt ggtccgagac tcgcgtcaac ggggtgcgcc gaggacgaga
      421 aatgtccgcc cgcgcgaggc cgcgcttgac cccttggcgt tgtggatcga aaaggtgagg
      481 acaccgtggt cgccgccgct cacttgctcc cctcggactt cgaggcgaag cccttcgtca
      541 aatgggtcgg cggcaagcgc cagctcctgc ccgcgatcct caagcacgtg cggctcgccg
      601 aaggggccgt ttatcacgag ccgttcgtcg gcggaggagc cgtgttcttc caccggcagc
      661 cgaagcgcgc gttcttgacc gactcgaacg cgcggctcat ccggacgtac cgcggcatca
      721 agcaagacgt cgaaggcgtg atccgcctgc tgcgctccta tccccacgac aaggggttct
      781 acctcgagat gcgcgcgcgc gacatcgacg ccgaaagcga cgtcgcgatc gcggcctggt
      841 tcatctactt gaaccgcacc ggctacaacg ggctctatcg cgtcaacagc aagaacggct
      901 tcaacgtgcc gttcggcgat tacaagaacc ccaccatctg cgacgccgac aacctgcgcg
      961 cctgctcgcg tgccctgcgc ggcgcccgca tcgaaaagcg ggatttcgcg agcgtggtcg
     1021 cgcgggccaa gcgcggcgat ttcgtctatt tcgacccgcc gtacatcccc ctcaccgcca
     1081 cgtccaaatt cacggactac acgagcgaag gcttctccga cgccgaccag gtgcgcctgc
     1141 gcgacgttgc cgtcgagctc aagcgccgcg gcgtctcggt cctgctctcg aactcctcgg
     1201 ccccgcgcgt gtacgatctg tactccgcgc acttcgaatg cgtcgaggtc gacgcgcgcc
     1261 gctcggtcaa ctgcaacccg aacggacgcg gtcgcatccc cgagctcttg atccgctgaa
     1321 atgtcgggac gagggaccgc tccgtccggc ggtgacgcgc tcgagctagc agtcgcaaat
     1381 ctcgcgcagc ggctcggact cgaggtgcgg cgtcaggtca aagtggggcg ccgactctgg
     1441 ggcgccgagc ggcggatcga cgtcgtcgtg acggagccca cgagccgtcg ccggctggga
     1501 ctcgaatgca agtttcaagg ggtgcctggg acggccgagg aaaaaatccc gaccacgatc
     1561 caggacatct cggcctggcc catcccgggg ctcgtcgtct tctcgggtga aggcttcagc
     1621 ccctacatgc ggtcgttgtt gatcgcctct ggccgctccg tggagctcga ggacctcgag
     1681 gcctggctac gtctgttctt cggattgccc ctcgactgag aggcaacccg aagctccagc
     1741 cggccgcgcg cacgctccat cgcgtgcggc gccgcgtcag ggcgacgcga gctcgatcgc
     1801 ctgcttgtcc cagaatgcgc cggcttgcgg accgccgttg cacgcgccgt cggattcacc
     1861 ggggcgcttg agccagaggt aagcgtcgat gatgttcgga tcgtcggtgt ccgtcgtggg
     1921 cggcagcccg agcttcctgc cgggcgggtt gcaccactcg gtgccgtagg ggcccgcgcc
     1981 gttgcggctc gtgtcgatca cgaagtgcgc gccaccaagc agagcgctga gcttcttacc
     2041 gaacggcaag agctcgtcca tcgcgcggta attcgaggtg ttcaacgcga agccgttcgc
     2101 gtcctcgacg ccggccatct tgagcaggcg cgcttcttcc tcgaccggat gccagcgcga
     2161 gtgaccgccg tcgagataca cgatcgtctt cggattctgg cgcaaaacct tgatcgcgtc
     2221 gtgcaagagg aacacgcgtt cggcctgctg ctccttcgtg aggcagttct ctttttcgag
     2281 caaaccgagc gcgtcgggct cgaggatgat gatcgccgaa cggtcgccga tcccggccgc
     2341 gaccttacgc acccagcgct ggtagctctc cttggtcttg aggccgcccg cggagtgttg
     2401 gccgcagtcg cgaccgggca cgttgtagag gatgaacgtc ggcacctcgc tcttggcgga
     2461 ggactgatcg accgtccact tcaccttgcg gtaaacgttg ctattccact cgccgagcca
     2521 gagcgcctgc gagtacttgg cgatcttttc gcggaagagc ttggcgacgt cgggctgcgt
     2581 cttgtcgagc gcgtcggcgc gcaacgctgc gttggtttcc ggatcgatcc agagcttgat
     2641 gcccttgagc ggattgccgg tggccttggg cggcgtaggg gcctcggtga tgggcgcgtc
     2701 gtccggcggg ccattgtcgt tgtccggggc gagcgcggcg ttcgcgggag cgcccgccgg
     2761 actctgagct tgagagccgc cgcaggcgac gaaggcgccg agcacaccgg cgagggcgag
     2821 cgagcgcagg gccaggcccg cgtgcagccg cgagctcgag ccgaagaaat ggaaaacacc
     2881 gattgacgag gccatgaagg gctcctttat tccgcctctt cgccgccggc aaggcgtccg
     2941 aacaagcggg attcactcaa gagagccatg gtcagtgacg ccgcttccga tcgaaaaatc
     3001 gttcaaaacg gaacaggacg gcgccgaacc gggttctcga cgcaaggcgc caagccgggc
     3061 gcccaaaaca agcgagcagc gtgaggaaca ggagcggcag cgaaaaacgc agcgtgcgcg
     3121 gaaagtaacg gaacgtgacg cgctcggtcg cagcggtgag ccgcgttgcg acgaggccgt
     3181 ccgcgtcgag cgccggctcg ccgtccgcgc gccagctcgc gtcgtagttc atgtcataga
     3241 cgagcagatc gcccgggcgc gcgccgctca cttcgacgac tgcgtggttc ggcgtccact
     3301 ccgtcacgcg cgccgccccc tcaccgagca cgaacgcgag cccgcggtac tcgggagctt
     3361 cgaccggaac ggcgctgggc atgaaattcg gatcgacgcc gtagcagcgc gtcacgccct
     3421 tgttggcaaa catcgcgagg agcacgggag cggcccaatc acgccggacg tattgcacgg
     3481 gcggcaaggc gtgctgctcg aagagctcgg cgcgcgggat ctcggccggc gccgtcatcc
     3541 agaacgcctg cgtgaagggc gtgcgcgaga agcg
//
LOCUS       DATIML010000354         3555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4694664, whole genome shotgun sequence.
ACCESSION   DATIML010000354 DATIML010000000
VERSION     DATIML010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3555
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4694664"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /gene="metK"
                     /locus_tag="VLJ38_06110"
     CDS             complement(<1..1027)
                     /gene="metK"
                     /locus_tag="VLJ38_06110"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HSU39119.1"
                     /translation="MSSYLFSSESVTEGHPDKICDAVSDAVLDAALAGDPKSRVACET
                     LCKTCFVVVAGEITTKSAIDFGKIARRVIKDIGYTDSSMGFDYETCGVLTAVEPQSPD
                     ISQGVTEGEGLFKEQGAGDQGLMFGYATDETPELMPAPIMYAHALTRVLAGVRKAGKV
                     DFLRPDGKSQVTLEYENDRPKRIETVVVSTQHAPSVKHKDLKEAVMELVVKKALPKNL
                     LDSKTKYFINPTGRFVIGGPFGDAGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRS
                     ACYYARFIAKNVVAAGLAKRCEVQVAYAIGVARPVGIYVNTFGTGKVSDDKLQAYVEE
                     HFDMRPKA"
     gene            complement(1191..1604)
                     /locus_tag="VLJ38_06115"
     CDS             complement(1191..1604)
                     /locus_tag="VLJ38_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSU39120.1"
                     /translation="MTLEEGTAKRSPASWPGALVRFTCLACFLALGLGACGPSKGTIG
                     AVLARDADGRLFVHDVPEGLAAERAGLEAGDEILLIDGRDARALGPHGVHQALSGNVG
                     DPVKLTLVRRGEIVRVTLARTVARRYPLGSEATTP"
     gene            complement(1609..2790)
                     /gene="argJ"
                     /locus_tag="VLJ38_06120"
     CDS             complement(1609..2790)
                     /gene="argJ"
                     /locus_tag="VLJ38_06120"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HSU39121.1"
                     /translation="MAQPVAGFRFAAVASGIRKDGRIDTALAFAERPATAAGVVTRNR
                     VKAAPILIASERLRGGELSAVLVNSGCANACTGEPGLAAARQATAAVARELGVPEARV
                     VPASTGVIGALLPAEKIAAHAPELVRALSATGIDDFARAICTTDRWPKVAEAIIETPR
                     GAARVLGIGKGAGMIHPDVGPPQATMLVFLFTDAKVSERELAGALVPAADRTFNAVSV
                     DGDTSTNDFVLALASGASDLEVPADALRASLEKVCGELARSMVRDGEGAEHAVEILVR
                     GLATEADARQIAKTIATSLLVKTALFGHDANWGRLLAAAGRAGVAFDPNVASVSIAGV
                     EIVRAGVSLGPELEAEAQRGMQAESFSVELGLGSGTGRFAYLTSDLGHGYVDVNAGYR
                     S"
     gene            complement(3021..3092)
                     /locus_tag="VLJ38_06125"
     tRNA            complement(3021..3092)
                     /locus_tag="VLJ38_06125"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3058..3060),aa:Thr,seq:cgt)
     gene            complement(3201..>3555)
                     /locus_tag="VLJ38_06130"
     CDS             complement(3201..>3555)
                     /locus_tag="VLJ38_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39122.1"
                     /translation="SNCMPTCGDGVATAAEECDLGTAMNTGAYGGCTADCHYGGWCGD
                     GVVNGPEECDSGKANGVSYTPQPDPNACSFGCTKAHYCGDGIIDAHDGEQCDDGDKNG
                     PGRCQMNCILKDVNR"
BASE COUNT          568 a         1229 c         1181 g          577 t
ORIGIN      
        1 gcgccttggg gcgcatgtcg aagtgctcct cgacgtaggc ctggagcttg tcgtccgaga
       61 ccttgccggt gccgaacgtg ttgacgtaga tgccgacggg gcgcgcgacg ccgatcgcgt
      121 acgcgacctg cacctcgcag cgcttcgcga gaccggcggc gacgacgttc ttcgcgatga
      181 agcgcgcgta gtagcaagcc gagcgatcga ccttcgacgg atctttgccg ctgaaggcgc
      241 cgccgccgtg acggcccatg ccgccgtagg tatcgacgat gatcttgcgg cccgtgaggc
      301 ccgcgtcgcc gaacggaccg ccgatgacga agcgtcccgt cggattgatg aagtacttcg
      361 tcttcgagtc gagcaggttc ttcggcagcg ccttcttgac cacgagctcc atcacggcct
      421 ctttgaggtc cttgtgcttg acgctgggcg cgtgctgcgt cgagacgacg accgtctcga
      481 tgcgtttcgg ccggtcgttt tcgtactcga gcgtcacctg ggatttgccg tcggggcgca
      541 ggaagtccac cttgccagcc ttacgcacgc cggcgagcac gcgcgtgaga gcatgcgcgt
      601 acatgatggg cgcgggcatg agctcgggcg tctcgtccgt ggcgtagccg aacatcagac
      661 cttggtcgcc ggcgccctgc tccttgaaca ggccctcacc ctccgtcacg ccttgcgaga
      721 tatcgggcga ctgcggctcg acggcggtga gcacgccgca cgtctcgtag tcgaacccca
      781 tcgacgagtc ggtgtacccg atgtccttga tgacgcggcg ggcgatcttg ccgaagtcga
      841 tggctgactt ggtcgtgatc tcgccggcga cgacgacgaa gcacgtcttg cacaaggtct
      901 cgcaagcgac gcggctcttc ggatcaccgg cgagcgctgc gtcgaggacg gcgtccgaaa
      961 cggcgtcgca aatcttgtcc gggtgacctt cggtgacgga ctcggaactg aaaagatagc
     1021 tagacatcga tcgatttcct tgtgcgaaga gccgctcggc agcaggcggc cgagctccga
     1081 atcgggagct attgccccga cgcgacggcc cggcaagcta gcatgatttc ccccggagtc
     1141 ccgatggatt cggcggctgc cgaggctcgc gagcaccgcc tgccgcgagt tcacggtgtc
     1201 gtggcttcgg agccgagcgg gtagcggcgg gcgaccgtgc gggcgagggt cacgcgcaca
     1261 atctcgccac ggcggacgag cgtgagtttc accgggtcgc cgacattgcc cgagagcgct
     1321 tgatgcacgc cgtgtggccc gagcgcccgc gcgtcacgcc cgtcgatcag caaaatttcg
     1381 tcgcccgcct cgagccccgc acgctcggcg gccagcccct cgggcacgtc gtgcacgaac
     1441 agtcgtccgt cggcatcgcg agccagcacg gccccgatcg tgcccttcga ggggccgcag
     1501 gcgccgagcc ccagcgccag aaagcaagcc aagcaggtga aacgtaccag cgcgccgggc
     1561 cacgacgctg gtgaacgctt ggccgtgccc tcctccaagg tcaccggctc aggagcgata
     1621 gccggcgttg acgtcgacgt agccgtgacc gagatcgctc gtgaggtagg caaagcgtcc
     1681 ggttccgcta ccgaggccga gttccacgct gaagctctcc gcctgcatgc cacgttgggc
     1741 ttcggcttcg agctccgggc cgagcgacac gccggcgcgc acgatctcga cccctgcgat
     1801 cgagacgctc gccacgttcg ggtcgaacgc cacgcccgcg cggccggcgg cggcgagcaa
     1861 gcgtccccaa ttggcgtcat gcccgaacag ggccgtcttc accagcaagg acgtggcaat
     1921 cgttttggcg atctgccgcg cgtccgcttc ggtcgccaat ccccgcacca ggatttcgac
     1981 ggcgtgctcg gcgccttctc cgtcgcgcac catcgagcgg gcgagctcgc cgcagacctt
     2041 ctcgaggctc gcccggagtg cgtcggcggg cacttcgaga tcggacgcac ccgaagcgag
     2101 cgcgagcacg aaatcgttcg tactcgtatc accgtcgacg ctcactgcgt tgaacgtccg
     2161 atcggcagcg ggcacgagcg cgcccgcgag ctcgcgttcg ctcaccttcg cgtcggtgaa
     2221 gagaaagacg agcatggtcg cctggggcgg ccccacgtcg ggatgaatca tgcccgcgcc
     2281 cttgccgatg ccgagcacgc gcgctgcgcc gcgcggcgtt tcgatgatcg cttcggcgac
     2341 cttcggccag cgatcggtcg tgcaaatggc gcgcgcaaaa tcgtcgatgc ccgtggctga
     2401 gagcgcgcgc acgagctcgg gcgcatgcgc cgcaattttt tccgcgggga gcagcgcacc
     2461 gatgacgccc gtagacgccg gcacgacacg cgcctccggc acgccgagct ccctggcgac
     2521 ggcagccgtc gcttggcggg cggcggcgag ccccggctcg cccgtgcacg cgttggcgca
     2581 gccactgttg acgagcaccg cgctgagctc tccgccacgg agccgctcac tcgcgatcag
     2641 aatcggcgcg gccttcacgc gattgcgcgt caccaccccc gctgccgtcg ccggtcgctc
     2701 ggcgaacgca agcgccgtat cgatgcgccc gtccttgcga atccccgacg cgaccgccgc
     2761 gaaccgaaaa ccagcgaccg gctgagccat gcgcccggaa gcttgcacga tcgtcccgct
     2821 ctgtcatccg aacggggcgc cggccgaagg ccccatcgtt gctcggcacc gaacgagcga
     2881 agcgagtgag gcgccgcctt cgagacttgc accgtcggcc cgtaccgaac tgcgacgggc
     2941 ggctagctgc ggtcacgaac cgcgccgcac gtaggtctaa agtctcgaac gtggcgacaa
     3001 gcgagcgaag cgagcgacgg agccaccttc gagacttgaa ctcgagacct acggtttacg
     3061 aaaccgttgc tctaccactg agctaaggtg gccgaaacgc gcgcgagaat acgcgcgaag
     3121 cggcgcgcgt caagctcgga ctcgcgaatc gtgcggcccc tcgggcgggg ccgcacgtgc
     3181 aaagccgctc ggcccgggct ttagcggttg acgtccttca ggatgcagtt catctggcaa
     3241 cgccccggac cgttcttgtc gccgtcgtcg cactgttcgc cgtcgtgggc gtcgatgatg
     3301 ccgtcgccgc agtagtgcgc cttcgtgcag ccgaacgagc aggcgttcgg atccggttgc
     3361 ggggtgtagc tcacgccgtt ggccttgccg gagtcgcact cctcgggccc gttcacgacg
     3421 ccgtcgccac accagccgcc gtagtggcaa tcggcggtgc agccgccgta cgcgccggtg
     3481 ttcatggccg tgccaaggtc gcactcttcc gcggccgtcg cgacaccgtc gccgcaggtg
     3541 ggcatgcagt tcgac
//
LOCUS       DATIML010000355         5352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4982628, whole genome shotgun sequence.
ACCESSION   DATIML010000355 DATIML010000000
VERSION     DATIML010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5352
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4982628"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..1061)
                     /locus_tag="VLJ38_06135"
     CDS             complement(114..1061)
                     /locus_tag="VLJ38_06135"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HSU39123.1"
                     /translation="MPIALITGIHGQDGSFLAPLLLEKGYRVVGIDLTRRPAAPGVEV
                     LQGDVTDASSVTQAIATVKPHEIYHFAGQSSVGRSFAEPEPTFMSTAVSTLHVLEAVR
                     RERPEARVFVAASGEVFGDTAGARANESTPLRAASPYAAAKSAAVLLTQSYRVSYDLF
                     CCVAFFYNHESPLRPETFVTRKIVRAACRIARGLADHVELGDTSVIRDWGWAPEYVDA
                     AFRMLQASAPEDLVIATGESCSLDHFLERTFSSLGLDHRAHVVRNPAHVRDAEIHAMH
                     ADPTRAAERLGWRATTRVNGVIERLIEAEQRTLDVEASR"
     gene            complement(1179..3155)
                     /locus_tag="VLJ38_06140"
     CDS             complement(1179..3155)
                     /locus_tag="VLJ38_06140"
                     /inference="COORDINATES: protein motif:HMM:NF036933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgGFc-binding protein"
                     /protein_id="HSU39124.1"
                     /translation="MARLIRGVAWLASLFCLAMALGACTPDPSDRWLYHPNSAVCTTG
                     SYRCAPELEQCTTDHGAPAWSKLANCSKAGLVCSASLGACTTCLPGKVDCQGSTAVRC
                     SSDGSAWETVDICDESQGEACRQGACNNLCNQASRQRSNVGCEYWAVDLDNADVDDTL
                     NAAAQQYAVVVSNAQPDVTAHVTIDQDDTEPGEDNAPYTVAETDIPPLSLRVFPLGPR
                     EVDGSAPGTFDSGTNTALTRQAFRVRSTFPVVAYQFNPLANVGVFSNDASLLKPREAV
                     EPEGEGLQTEYVVVGWPQTIAHTMDPRTNFSSSTRVDLRAFLTLVGTRANTTVRVHTA
                     ARFVGAPGIAETAAGGELTQTLGPFDVLNLETEDFNADFTGSIVEADGPVIAYTGSEA
                     SDAPYFASLGQRYCCADHLEEQLDHVRTAGQNFVAAVTPSRTDALAAAGAAVGHTDQS
                     DYFRVVAATTTGAHVTTSLAKTPAVDLAGQGDFYDIVSDQSFFLTSDKPVSLMSVSPS
                     QEAAGVPQSLPGGDPSNLIIPPIEQFRSTYVFLTPDEYAFDFVRIAAPEAAVIVFDGR
                     SLDDLGCTTVTAGTLVPPLSSPETYVVHTCQLGFPVIDPNGQPPDNFQPGTQNDGVHI
                     IESDRNIGVLVDGFDRYVSYAYAAGTELSFIVPR"
     gene            complement(3171..>5352)
                     /locus_tag="VLJ38_06145"
     CDS             complement(3171..>5352)
                     /locus_tag="VLJ38_06145"
                     /inference="COORDINATES: protein motif:HMM:NF013955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IPT/TIG domain-containing protein"
                     /protein_id="HSU39125.1"
                     /translation="KNSRTGRYKPSGVARAGKKGRARACSARTAALPLGAVRRFARSL
                     LVVSVVGVACLPTRTRRLPPQYEEPPPPTVIGLDGGGETPGDAPKPKPHAVLGVDPPH
                     GPFAGGTLTAIRGNGFSSQARVWFGETEVPADGVLVLDPQRMQVTSPPGVPGAADIAV
                     QNGDDGSTRATLRGGFTYDDFYLEPATGPTAGGTLVTLHAEAPIFDDATSIEIDQSPC
                     AIEEIRSGTELVCRTPPGTPGAKRVRVTDTDGDIDVLDAFTYVVDSDGYRGGLAGDPL
                     DGQVEVLVLDNVLGKAVPGATVLVGSDAKSALSAKTDAFGTALVTSSELGVKATVTVA
                     KKCFQPQTFIDVPVEKLTVFLDPVLSPDCGDAGDIPVGGGTPGKAAYVTGQLVWPLDG
                     ELRMNGFGNVPPPGSDDVKQVAYVFRLASRPTDKYSQPSALAAVTPETVGDVGYSFSL
                     PTSPGNFTLYALAGLEDRSRSPYVFTPYALGLTRGVAVGANQTHADVFISIDIPIDHS
                     LTLDASGPTPTPRGPDRIQASLAIQIGNEGYVLLPNGRISSLLPPDGPFQFVGIPPLV
                     GPLTGSRYVTTASAVTGDAGGTPRSSVGLFSTVTSDTTVGVGAFVELPVLVTPVSSSL
                     WDRSSFTLEHAAGGPEPDLTLMDISSGNGLITWRVVAPGAPDHVQVPDLSRIDPDLAL
                     VSGPLAIDVHLARIDDFAYGELSSGQLDSRGWRAYAEDVFFATY"
BASE COUNT          845 a         1773 c         1868 g          866 t
ORIGIN      
        1 tgccgttcag cgcgcgaccg tggccgagcg tcgtcggcgc gccgcgcggc cctcgcggtc
       61 ggctgttcag cgataacgtc ctcgtccgcg ggcgcaagcc cgtcgcttga atctcagcgc
      121 gacgcttcga cgtcgagcgt gcgctgttcc gcttcgatca gccgctcgat caccccgttc
      181 acccgcgtcg tggcgcgcca gccgaggcgt tcggcggcgc gcgtcggatc ggcgtgcatg
      241 gcgtggattt cggcgtcccg gacgtgcgcg gggttcctga cgacatgcgc gcggtggtcg
      301 agcccgaggc tcgagaacgt tcgctcgaga aagtgatcga gcgagcatga ctcgcccgtc
      361 gcgatcacga ggtcttccgg agcggaagct tgcagcatgc gaaatgcggc gtcgacgtac
      421 tcgggcgccc agccccaatc gcgaatcacg ctggtatctc cgagctccac gtggtcggcg
      481 agcccgcgcg cgatgcggca ggccgcgcgc acgatcttgc gcgttacgaa cgtctccggc
      541 cggagcggcg attcgtggtt gtagaagaac gcgacgcagc aaaacaggtc gtacgaaacc
      601 cggtagcttt gcgtcaagag caccgcagcg ctctttgcgg cggcgtaggg actcgccgct
      661 cggagcggcg tgctctcgtt cgcgcgcgcg cccgcggtgt cgccgaagac ctcccccgag
      721 gcggcgacga acacgcgcgc ctcggggcgc tcgcgacgca cggcctcgag cacatgcagt
      781 gtgctcaccg ccgtgctcat gaacgtcggc tcgggctccg cgaacgagcg cccgaccgag
      841 ctctgccccg caaagtgata aatctcgtgc ggtttgacgg tcgcgattgc ctgcgtgacg
      901 ctgctagcgt ccgtcacgtc accctgcagc acttcgacgc ccggtgcggc cggccgccgc
      961 gtgaggtcga tgccgacgac gcggtagccc ttttcgagca acagcggcgc gagaaatgag
     1021 ccgtcctggc cgtggatccc ggtgatgagc gcgatcggca tcgccgtgag cttgctactg
     1081 tgttcgagcg ctcagagcaa gcgccctccg acgcccgcgg cgctccgaac ggcttttcca
     1141 ttccgtgacg gagccgcccc cggaaccgac gccgaggctc agcgcgggac gatgaacgag
     1201 agctcggtgc ccgcggcgta cgcgtagctc acgtaacgat cgaagccgtc gacgagcacg
     1261 ccgatattgc ggtccgattc gatgatgtgc acgccgtcgt tctgcgtgcc gggctggaaa
     1321 ttgtccggcg gctggccatt cgggtcgatc acggggaacc cgagttgaca ggtgtgtacc
     1381 acgtaggttt ccggcgacga aagcggcgga accagcgttc cggccgtgac tgtcgtgcag
     1441 ccgaggtcgt cgagcgagcg gccatcgaac acgatcacgg ccgcttccgg cgcagcgatc
     1501 cgcacgaaat cgaacgcgta ctcgtcgggc gtcaaaaaga cgtaggtcga gcgaaactgc
     1561 tcgatgggcg ggatgatgag gttactcgga tccccgccgg gcaagctctg cggcacgccg
     1621 gcggcttcct ggctcggcga cacgctcatg agcgagacgg gcttgtcgct cgtgaggaaa
     1681 aacgactgat cgctgacgat gtcgtaaaag tcgccctgcc cggcgaggtc cacggcgggt
     1741 gtcttcgcga gcgacgtcgt gacgtgcgct ccggtcgtgg tggcggcgac gacgcgaaaa
     1801 taatcgctct ggtccgtgtg cccgaccgcg gcgccggcgg cggcgagcgc atcggtgcgg
     1861 ctgggcgtca cggcggcgac gaagttctgt cccgcggtgc gcacgtgatc gagctgctct
     1921 tccaagtggt cggcgcagca atagcgctgg ccgaggctcg cgaaataggg ggcgtcgctc
     1981 gcttcgctgc cggtgtacgc gatcacgggg ccatcggctt cgacgatcga gcccgtgaag
     2041 tcagcgttga aatcctcggt ctccaggttc aacacgtcga acgggccgag cgtctgagtg
     2101 agctccccgc cggccgccgt ctcggcgatg cccggcgcgc ccacgaagcg cgccgccgtg
     2161 tgcacgcgca ccgtcgtgtt cgcgcgcgtg ccgacgagcg tgaggaacgc gcgcaaatcg
     2221 acgcgcgtcg acgagctgaa gttcgtgcgt ggatccatgg tgtgcgcgat cgtttgcggc
     2281 cagccgacga ccacgtattc ggtctgtagt ccttcgcctt ccggctcgac ggcctcgcgc
     2341 ggcttgagca gtgacgcgtc gttggagaac acgccgacgt tcgcgagcgg attgaattga
     2401 taggcgacga ccggaaaggt cgagcgcacc cgaaacgcct ggcgcgtgag cgccgtgttc
     2461 gtcccgctgt cgaacgtgcc gggcgccgag ccgtccacct cgcgcgggcc gagcggaaac
     2521 acacgtagac tgagcggcgg aatgtcggtt tcagcgacgg tgtacggcgc gttgtcctcg
     2581 ccgggctcgg tgtcgtcttg gtcgatcgtc acgtgcgccg tcacgtcggg ctgcgcattg
     2641 ctcacgacga cggcatactg ctgggctgcg gcattcagcg tgtcgtcgac gtccgcgttg
     2701 tcgagatcga cggcccagta ctcgcagccg acgttgctgc gctgccgcga agcctgattg
     2761 cacaaattgt tacaggcgcc ttgccggcag gcttcaccct ggctctcgtc gcagatgtcc
     2821 acggtttccc aggcgctacc gtccgagctg cagcggaccg cggtcgagcc ctgacaatcg
     2881 actttgccgg gcaggcaggt cgtgcaggcg ccgagactcg ccgagcacac gaggccggct
     2941 ttcgagcagt tcgcgagctt gctccaagcc ggcgcgccat gatcggtcgt gcattgctcg
     3001 agctcgggcg cgcagcgata gctgcccgtg gtgcaaacgg cgctgttcgg gtggtaaagc
     3061 cagcgatccg acggatccgg cgtgcaagcg ccgagtgcca tggcgaggca gaacaggctg
     3121 gcgagccatg cgaccccgcg gatcaggcgc gccacgcggc tgccttcgcg tcagtaagtc
     3181 gcaaagaaaa cgtcctcggc gtaggcgcgc cagccgcgcg aatcgagctg gccgctcgag
     3241 agctcgccgt acgcaaagtc gtcgatgcgc gccaaatgca cgtcaatcgc gagcgggccg
     3301 ctcacgagcg cgagatccgg atcgatgcgg ctcaaatctg gcacctggac gtgatcgggc
     3361 gcgccaggcg ccacgacgcg ccaagtgatg agcccgttac cgctcgaaat gtccatgagc
     3421 gtgagatcgg gctcgggccc tcccgcggcg tgctcgagcg tgaagctcga ccgatcccac
     3481 aggctgctgc tgacgggcgt gacgagcacc ggcaactcga cgaacgctcc cacgccgacc
     3541 gtcgtgtcgc tcgtgacggt cgagaacaaa cccaccgacg aacgcggcgt cccgcccgcg
     3601 tcgcccgtca cggcgctcgc cgtcgtgacg tagcgtgagc cagtgagcgg gccgacgagc
     3661 ggcgggatgc cgacgaactg aaatggcccg tcgggcggca acaggctcga aatccgcccg
     3721 ttcggcagca agacgtagcc ctcgttaccg atctggatcg cgaggctcgc ttgaatgcgg
     3781 tccggcccgc gcggggtcgg cgtcgggccg ctggcgtcga gagtgagcga gtgatcgatg
     3841 ggtatgtcga tcgaaatgaa gacgtcagcg tgtgtctggt tcgcgccgac ggcgacgccg
     3901 cgcgtgagcc cgagcgcgta aggcgtgaag acgtaggggg accgtgagcg atcctcgagg
     3961 cccgcgagcg cgtagagcgt gaaattgccg gggctcgtcg gtagcgaaaa cgagtagccc
     4021 acgtcgccga ccgtctccgg tgtcacggcg gcgagcgcgc tcggctgcga gtacttgtcg
     4081 gtgggccgtg aggcgagcct aaacacgtac gcaacctgct tcacgtcgtc cgaccccggc
     4141 ggcgggacgt tgccgaaacc gttcatcctg agctcgccgt cgagcggcca gacgagctgc
     4201 ccggtgacgt aggcggcctt gcccggagtg ccgcccccga cgggaatgtc gcctgcgtcg
     4261 ccgcagtcgg gcgacagcac cggatccaga aataccgtca gcttttcgac gggcacgtcg
     4321 atgaacgtct gcggttgaaa gcacttcttc gcgacggtga ccgtcgcctt caccccgagc
     4381 tcggagctcg tgacgagcgc ggtgccaaag gcgtcggtct tcgcgctgag cgcgctcttg
     4441 gcgtccgagc cgacgagcac ggtcgcgcct ggcaccgcct tgccgagcac gttgtcgagc
     4501 accagcacct cgacctgacc gtcgagggga tcccccgcga gtccgccgcg gtagccgtca
     4561 ctgtccacga cgtacgtgaa cgcgtcgagc acgtcgatgt cgccgtcggt gtccgtcacc
     4621 cgcacgcgct tggcgccagg cgtgccgggc ggcgtacgac agacgagctc agtgccgctc
     4681 cggatctcct cgatcgcgca gggcgactga tcgatctcga tgctcgtggc gtcgtcgaaa
     4741 atgggcgctt ccgcgtgcag cgtgacgagc gtgccgcccg cggtgggtcc cgtcgcaggc
     4801 tcgaggtaga aatcgtcgta cgtgaagccg cctcggagtg tcgcgcgcgt cgagccgtcg
     4861 tcaccgtttt gcaccgcgat atccgcggcg cccgggacgc ccggggggct cgtcacttgc
     4921 atgcgttgcg gatcgagcac gagcacgccg tctgccggca cctccgtctc tccgaaccag
     4981 acgcgtgcct ggctcgaaaa cccattgccg cgaatggccg tcagcgtgcc ccccgcgaac
     5041 gggccgtgcg gcgggtcgac gccgagcacg gcgtgcggct tcggtttcgg cgcgtccccc
     5101 ggcgtctcgc caccgccgtc gaggccgatg accgtcggcg ggggcggctc ctcgtattgc
     5161 ggcgggagac ggcgcgtgcg cgtcggcagg caagcgacgc ctacgacgga aacgacgagg
     5221 agtgagcgcg cgaagcggcg cacggcaccc aagggtaggg ccgcggtccg ggccgagcaa
     5281 gctcgcgctc gtcctttctt gcccgcgcgt gcgacgcctg acggtttgta gcgccctgtc
     5341 cgtgaatttt tc
//
LOCUS       DATIML010000356         2167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2960114, whole genome shotgun sequence.
ACCESSION   DATIML010000356 DATIML010000000
VERSION     DATIML010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2960114"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2167)
                     /locus_tag="VLJ38_06150"
     CDS             complement(<1..>2167)
                     /locus_tag="VLJ38_06150"
                     /inference="COORDINATES: protein motif:HMM:NF013239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TIM-barrel domain-containing protein"
                     /protein_id="HSU39126.1"
                     /translation="ELELCVERDEFHFDVRRRDGTTVVRSARDASGRSLAYQELNDAF
                     ALVRSATPDDAILGLGEKTGPFDRRGQSYTLFNVDVLSPNVHRHHRLIGSEEPPDAEG
                     TDFDPYYASIPFYLHGERAATTLAFAGSFFDNGWLGRFDFEAEHELKIQFAGGAYAEY
                     VLAGPRVPSVVEAYTFLTGRPALPPLWALGHHQCRWHAYSDAELVALGREYRRRGIPC
                     DALWLDIEHMDGYRVFSFHPERFPEPERTFAKLRADGFRAVTIVDPGVKRESGDPVFD
                     AGVRGGHFCKTETGTLYEGRVWPGRTVFPDFVREETRAFWSELVATHAARGVAGIWND
                     MNEPATGGIEPFGMRFDRDRADHPHERFHNQYALLMALATHAGLSAARPDERPFILSR
                     AGSAGIQRLAAQWLGDHSASWQHLGMGLPMALGFGLSGQPFVGGDVPGFAGTATPELA
                     ARWFEYAALTPFCRCHHQIDLPDQYPWSFGPDVERVARAALELRYRLLPYLYTAFFEA
                     SRSGAPVQRPLVFDFQDDANAAVLDDEFLLGDALLVAPVLSAGVAKRSVYLPQGSWLE
                     WHSGRVHLGGRTLEVSAPIGKVPLFLRAGCALPLWETAPATTLGHAPERIELLLVAPQ
                     QDGHQSSVLYEDDGISHAHRDGRYLLTRIDVERRGSSFRVSGSTTGARFDALARTELS
                     LAFRGLVPKNVRLDGRAVTLTHGALTFAHVDEPFELVGDL"
BASE COUNT          374 a          721 c          754 g          318 t
ORIGIN      
        1 agatcgccca cgagctcgaa cggctcgtcc acgtgcgcga aagtcagggc gccgtgcgtc
       61 aatgtcacgg cgcgtccgtc gagccgcacg ttcttgggca ccaagccgcg aaatgcgagc
      121 gagagctctg tgcgagcgag agcgtcgaaa cgcgcgcccg tcgtgctgcc gctcacgcga
      181 aagctgctcc cccgccgctc gacgtcgatc cgcgtgagca ggtaacgccc gtcgcggtgc
      241 gcgtggctga taccgtcgtc ttcgtagagc acgctgctct ggtgcccgtc ttgctgcggc
      301 gccacgagca gaagctcgat gcgttcgggt gcgtgaccga gtgtcgtcgc cggcgccgtt
      361 tcccagagcg gcagcgcaca gccagcgcgt agaaataggg gcaccttgcc gatgggggcg
      421 ctcacctcga gcgtgcgccc gcccagatgc acacgcccgg agtgccactc gagccagctg
      481 ccctgcggca gatacacgct acgtttcgcg acgcccgcac tgagcaccgg cgcaacgagc
      541 agcgcgtcac cgagcaagaa ctcgtcgtct aggaccgcgg cgttcgcgtc gtcttgaaaa
      601 tcgaacacga gcggcctttg cacgggcgcg ccgctgcggc tggcctcgaa gaacgcggtg
      661 tacaagtaag gcagcaaacg atacctgagc tcgagcgccg cgcgcgcgac acgctcgacg
      721 tccgggccga acgaccacgg atactgatcc ggcaaatcga tttggtgatg acagcgacag
      781 aacggcgtga gcgccgcgta ctcgaaccag cgcgccgcga gctcgggcgt cgccgtcccc
      841 gcgaagcccg gcacgtcgcc gcccacgaac ggctgccccg agagcccgaa gccgagcgcc
      901 atcggcaacc ccatgcccaa atgctgccaa ctggcggagt gatcaccgag ccactgcgcg
      961 gcgaggcgct gaatgccggc cgaccccgcg cggctcagga tgaagggacg ctcgtcgggg
     1021 cgcgcggcgc tgaggccggc gtgcgtggcg agcgccatca ggagcgcgta ttggttgtga
     1081 aagcgttcgt gggggtggtc ggcccggtcg cgatcgaagc gcatgccgaa gggctcgatg
     1141 ccgcccgtcg cgggctcgtt catgtcgttc cagatgccgg cgacgccgcg cgcggcgtgc
     1201 gtggcgacga gctcgctcca aaacgcgcgc gtctcctcgc gcacgaagtc ggggaacacg
     1261 gtgcgtcccg gccacacgcg cccctcgtag agcgtccctg tttcggtctt gcagaagtga
     1321 ccgccgcgga cacccgcgtc gaacacggga tcacctgatt cgcgtttgac gcccggatcg
     1381 acgatcgtga cggcgcgaaa gccgtcggcg cggagcttcg cgaacgtgcg ctccggttcg
     1441 ggaaatcgct cggggtgaaa gctgaagacg cgatagccgt ccatgtgctc gatgtcgagc
     1501 cagagcgcat cgcacgggat gccgcgacgc cggtattcgc gaccgagcgc gacgagctcg
     1561 gcgtcgctgt acgcgtgcca ccggcattgg tggtgaccga gggcccagag cggcggcagc
     1621 gccgggcgcc ccgtgagaaa cgtgtacgct tcgacgacgc tcggaacgcg cggtccggcg
     1681 agcacgtact cggcgtacgc gccccccgca aattggatct tgagctcgtg ttcggcttcg
     1741 aaatcgaagc gcccgagcca cccgttatcg aagaacgagc cggcgaacgc gagcgtcgta
     1801 gcggcgcgct cgccgtgcaa atagaagggt atcgaagcgt aataggggtc gaagtccgta
     1861 ccttcggcat cgggcggctc ttcggaaccg atgaggcggt ggtggcggtg gacgttcggc
     1921 gagagcacgt cgacgttgaa gagcgtgtag ctctgaccac gccggtcaaa cggtcccgtc
     1981 ttttcgccca ggcccaagat ggcatcgtcg ggcgtggcgg agcggacgag cgcgaacgcg
     2041 tcgttcagct cctgataggc gagggagcgg ccgctcgcgt cgcgcgcgct ccgaaccacg
     2101 gtcgtgccgt cgcgccgccg cacgtcgaag tggaactcgt cgcgctcgac gcaaagctcg
     2161 agctcgt
//
LOCUS       DATIML010000357         2540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_938514, whole genome shotgun sequence.
ACCESSION   DATIML010000357 DATIML010000000
VERSION     DATIML010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938514"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VLJ38_06155"
     CDS             complement(<1..308)
                     /locus_tag="VLJ38_06155"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39127.1"
                     /translation="MRVVQVGKYFHPYSGGIESHLYVLATELKSKVELDVVCSNDKPR
                     TERDVVSGVSVTRCASYGHYRSVEASPGMVLELSQRTYDVLHIHLPNPLGAASYFASL
                     "
     gene            complement(367..1389)
                     /locus_tag="VLJ38_06160"
     CDS             complement(367..1389)
                     /locus_tag="VLJ38_06160"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HSU39128.1"
                     /translation="MKIILTGGAGFIGCNAAARWIKRGEQVIVIDDLSRRGSDKNLEW
                     LKTQGKFSFYRQDIRGFDALAEIFREHRDAAAVVHLAAQVAVTTSVTDPRNDFEINAL
                     GTFNVLESVRRHCPATAFVFASTNKVYGSLPHARVGEVGGRYELVDREHGVSEDEPLD
                     FHSPYGCSKGAADQYVIDYGRIYGLRTVALRQSCIYGLRQMGVEDQGWVAWFSIAALL
                     NKPITIYGDGKQVRDVLFVDDLCDLYDACISQIDKAQGQAYNVGGGPQNRMSLLELVR
                     DLEARIGRPLRPAMSAIRPGDQPVFVADVRKAARDLGWAPRTPVDRGLSLLFDWISSN
                     RELFVT"
     gene            complement(1428..>2540)
                     /locus_tag="VLJ38_06165"
     CDS             complement(1428..>2540)
                     /locus_tag="VLJ38_06165"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU39129.1"
                     /translation="VIGVNRRLAHELGRVGGADWEVTCVAPAKYRADHGWARFAALPH
                     EPIRALGVRAYATRSPHLFGYGGELRSLLRAGWDAVFAWEEPYVVSGAQLAAWTPRQS
                     VFSFLTFQNIRKRFPPPFSWLERYTLERSDGWFYSGHSVFEVQRNAPGYRDRAGRLGP
                     LGVDLELFKPDGDARRRVREALGFTDDGPPVIGFVGRFVPEKGLHFLMRVLDRLRPAW
                     RALFLGGGVLEGEIRAWAERHAGRVQVVSAPHDRVPEYVNAFDLMCAPSETARHWREQ
                     FGRMLIEAFACAIPVIGSDSGEIPYVIGDAGLVAREGDEQAWISALERLLTEADARRE
                     FGARGLERATKVYAWPKVARGYLDFFEELIARRSRG"
BASE COUNT          492 a          844 c          809 g          395 t
ORIGIN      
        1 ttcaagctcg cgaagtaact tgccgcgccg agcgggttcg gcaagtgaat gtgcagcacg
       61 tcgtaggtgc gttgcgacag ctcgagcacc atgccgggcg atgcttcgac ggagcggtaa
      121 tgaccgtaag acgcgcagcg cgtcaccgac accccgctca cgacgtcacg ctccgtccgc
      181 ggtttgtcgt tcgagcaaac gacgtcgagc tcgaccttcg atttcagctc ggtcgcgagc
      241 acgtacaggt ggctctcgat gccaccgcta taaggatgaa agtacttgcc gacttggacg
      301 acgcgcatcg gggaaaagcc gggaacaggc cgtccgtcgt aggcagccgc tcgccgaggg
      361 cgacgactat gtcacgaaga gttcgcgatt cgaggagatc cagtcgaaga gcagcgagag
      421 accacgatcc acaggggtcc tcggggccca gccgaggtcg cgagcggctt tgcgcacgtc
      481 ggcgacgaac actggctggt cgcccgggcg aatggcggac atggccggcc ggagcggtcg
      541 tccgatacga gcctcgagat cgcgcacgag ctcgagcagg ctcatgcggt tctgagggcc
      601 gccgcccacg ttgtaagcct gaccttgcgc cttgtcgatt tggctgatgc aggcgtcgta
      661 caagtcgcag aggtcgtcga cgaagagcac gtcgcgtact tgcttgccgt cgccgtaaat
      721 ggtgatgggc ttgttcaaaa gcgccgcgat gctgaaccac gcgacccagc cctgatcctc
      781 gacgcccatt tggcgcaggc cgtaaatgca ggactggcgc agcgccacgg tgcgcaaccc
      841 gtagatgcga ccgtaatcga tgacgtattg atcggcggcg cccttcgagc agccgtaagg
      901 agagtgaaag tcgagcggct cgtcttcgga gacgccgtgt tcgcgatcga cgagctcgta
      961 acgaccgccg acttcaccga cacgcgcgtg cgggagcgag ccgtagactt tgttggtcga
     1021 tgcgaaaacg aaggccgtag cggggcaatg cctgcgcacc gactcgagca cgttgaacgt
     1081 cccgagcgcg ttgatctcga aatcgttgcg cggatcggtc acggaggtgg tcacggccac
     1141 ctgcgcggcc aggtgcacga ccgccgccgc gtcgcggtgc tcgcggaaaa tctcggcgag
     1201 cgcgtcgaag ccgcggatgt cctgacgata aaacgagaat ttgccctgag tcttgagcca
     1261 ctcgagattc ttgtcgctgc cgcgccggga cagatcgtct atgacgatca cctgttcacc
     1321 gcgcttgatc cagcgcgccg ccgcgttgca gccgatgaag ccagcgcccc cggtcaagat
     1381 aatcttcatg ccagtcctct cgtaacctgt cgtccgggag acgtccacta cccgcgcgac
     1441 ctccgtgcga tgagctcctc gaaaaaatcg agataacccc gggccacttt gggccaggcg
     1501 tagactttcg tcgcgcgctc gaggcctctt gccccgaact cgcggcgcgc atccgcttcg
     1561 gtcaacagcc gctcgagcgc ggaaatccac gcttgttcgt ccccctcgcg cgcgacgagg
     1621 cccgcgtcgc cgatgacgta gggaatttcc ccgctgtcac taccgatgac gggaatcgcg
     1681 caggcgaacg cctcgatcag catgcgcccg aactgctcac gccagtgacg ggcggtttca
     1741 ctcggcgcac acatgaggtc gaacgcgttc acgtactccg gcacgcgatc gtgcggcgcg
     1801 ctcacgacct gcacgcgccc ggcatgccgt tcggcccaag cccggatctc accctcgagc
     1861 acgccgccgc cgagaaaaag cgctcgccaa gccggacgca ggcgatccag cacccgcatc
     1921 aaaaagtgca gtcctttttc gggcacgaac cgccccacga agccaatcac gggcggcccg
     1981 tcgtccgtga agccgagcgc ctcgcgcacg cggcgacgcg cgtccccgtc aggcttgaaa
     2041 agctcgagat ccacgccgag cggaccaagc cgccccgcac ggtcacgata gccgggtgcg
     2101 ttgcgctgga cctcgaaaac ggaatgaccc gagtagaacc agccgtccga gcgctcgagc
     2161 gtgtaacgct cgagccagga aaacggcggc gggaagcgct tgcgaatatt ctggaacgtg
     2221 agaaacgaga aaacgctctg acgcggcgtc caggccgcga gctgcgcgcc cgacacgaca
     2281 tagggctctt cccaagcgaa taccgcgtcc caaccggcgc ggaggagcga gcgcagttcg
     2341 ccgccgtagc cgaaaaggtg gggactccgc gtcgcgtacg cgcgcacgcc gagcgcgcgg
     2401 atcggctcgt gcgggagcgc cgcgaaacgc gcccaaccgt gatccgcgcg gtatttggcc
     2461 ggcgcaacgc acgtcacctc ccaatcggcg cccccgacgc gcccgagttc gtgcgcgagc
     2521 cgccgattga caccgatgac
//
LOCUS       DATIML010000358         2321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3538090, whole genome shotgun sequence.
ACCESSION   DATIML010000358 DATIML010000000
VERSION     DATIML010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3538090"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /locus_tag="VLJ38_06170"
     CDS             complement(<1..1136)
                     /locus_tag="VLJ38_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39130.1"
                     /translation="MKACASCGRLYPDDAGFCPVDGTPLTSATQVPVQSDADDPRIGQ
                     LYGDRYQIRRVVADGGMGRVYEALDLQERRNVALKILHADVARDEVSVERFKREFEVS
                     STLPHQHIVEVLGFQPTHDGTYVLVMEFLYGEELRSTLKREAVIAPARLVRMLSQAAL
                     ALDSAHAMKLVHRDLKPDNLFLCQTREGDIVKVLDFGSVKDKGESAKKLTVLGTTIGS
                     PFYMAPEQAQGLETLDHRADVWALAAIAYECVTAHVPFAGSNGPSILLEILTKDPKPP
                     SEVGRGQKYPIPPTLDPVMAHAFKKMQALRTPSVGALADDVAAAYGLEGSHTHWATTA
                     ETEIAALIDAKMPALMQTKVAAPARSGDASDSFFGESGSLGAEAG"
     gene            complement(1185..1925)
                     /locus_tag="VLJ38_06175"
     CDS             complement(1185..1925)
                     /locus_tag="VLJ38_06175"
                     /inference="COORDINATES: protein motif:HMM:NF014630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc ribbon domain-containing protein"
                     /protein_id="HSU39131.1"
                     /translation="MKLQIEALEELSALDAELRELTDRFTKDQKVLSDKKAVAKSLED
                     RLTRGRQSLGEMEKARGDLVGELRQMSIQVERSREKLSRCRTEREANAAQREVEELRK
                     LYRDREIELEKLDGLIQQGRGEFDQVTEQHGTVSGDLGSSESDSMTRIATSEEELTRK
                     QAAREEIVHRIRPDLYRRYEMIRKRKGTALAWTRDGTCSACHIRLQPMLFQKLLRADE
                     FGQCPSCNRILYYRPAQQPEAEGQSGSP"
     gene            complement(1983..2056)
                     /locus_tag="VLJ38_06180"
     tRNA            complement(1983..2056)
                     /locus_tag="VLJ38_06180"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2020..2022),aa:Ile,seq:cat)
BASE COUNT          355 a          769 c          763 g          434 t
ORIGIN      
        1 cccgcctccg cgccgagtga cccgctctcg ccgaaaaacg aatcggaggc gtcgccggag
       61 cgggccggcg cggccacctt ggtctgcatc agcgccggca tcttggcgtc gatcagcgcg
      121 gcgatctcgg tttcggctgt cgtggcccag tgcgtgtgcg agccctcgag gccgtaggca
      181 gccgcgacgt cgtcggcgag cgctccgacc gacggcgtgc ggagcgcctg catcttcttg
      241 aaggcgtgcg ccatcaccgg atcgagcgtc ggcgggatcg ggtacttctg cccgcggccc
      301 acctcgctcg gcggcttcgg atccttcgtc aggatttcga gcagaatgct cggtccgttg
      361 ctgcccgcga agggcacgtg cgccgtcacg cactcgtacg cgatcgcggc gagcgcccac
      421 acgtcggcgc ggtgatcgag cgtttcgaga ccctgcgcct gctcgggcgc catgtagaac
      481 ggggaaccga tcgtcgtgcc gagcacggtg agcttcttgg ccgactcgcc tttgtccttg
      541 acggagccga aatccaagac cttgacgatg tcgccctcgc gcgtttggca caggaacaga
      601 ttgtccggct tgagatcgcg gtgcacgagc ttcatcgcgt gcgcggagtc gagcgcgagc
      661 gccgcctggc tcagcatgcg cacgagccgc gcaggggcga tcaccgcctc acgcttgagc
      721 gtgctgcgga gctcctcgcc gtagagaaac tccatgacga gaacgtaggt gccgtcgtgg
      781 gtcggctgga acccgagcac ctccacgatg tgctggtgcg gcagcgtgct gctcacctcg
      841 aactcgcgct tgaagcgctc gaccgacacc tcgtcgcgcg cgacgtcggc gtgcaggatt
      901 ttcagcgcga cgttgcgtcg ctcctgcagg tcgagcgctt cgtacacgcg tcccatgccg
      961 ccgtccgcga cgacacggcg gatctgatag cggtcgccgt agagctgccc gatgcgcgga
     1021 tcatcggcgt cgctttgtac cgggacctga gtcgcgctcg tgagcggcgt gccgtcgacc
     1081 gggcagaagc ccgcgtcgtc aggatagagg cgcccgcagg acgcacacgc tttcatggct
     1141 ctttcagatc ccgtccctgc aaggcggctc ggccacctcg agcgtcacgg acttcccgat
     1201 tgaccttcag cctcgggttg ctgagccggc cggtagtaaa ggatgcggtt gcagctcggg
     1261 cactggccga actcgtcggc gcgcaagagc ttctggaaca gcatcggctg caagcggatg
     1321 tggcacgcgc tgcaagtgcc gtcgcgcgtc caggcgagag ccgtgccttt acgtttgcgg
     1381 atcatctcgt agcgccggta gaggtcgggc ctgatgcggt gcacgatttc ctcgcgagcc
     1441 gcttgcttgc gagtgagctc ctcttccgag gtcgcgatgc gcgtcatcga gtccgactcg
     1501 ctcgaaccga gatcccccga gaccgtgccg tgctgctccg tcacttggtc gaactcgccg
     1561 cgcccctgct ggatcaggcc gtcgagcttc tcgagctcga tctcccgatc gcgatagagc
     1621 ttcctgagct cctcgacttc gcgttgagcg gcgttggcct cgcgctcggt gcgacagcgc
     1681 gaaagcttct cgcgcgagcg ctcgacttga atcgacatct gccggagctc gccgacgaga
     1741 tcgccgcgtg ccttctccat ttcaccgaga ctctggcgtc cacgcgtcag gcggtcttcg
     1801 aggctcttgg cgaccgcctt cttgtcgctc aaaactttct ggtctttggt gaagcggtcc
     1861 gtgagctcgc gaagctcggc gtccagggcg gacagctcct cgagggcctc gatctgcaac
     1921 ttcatcgtca cttaagcttg gctccttcgg ctgctctaca catggtcgca ccgcgcggcc
     1981 agtgggccca cctgggttcg aaccaggaac ggcccggtta tgagccgggg gctctgaccg
     2041 attgagctat gggccccgcg aacgctaccc gaaagcggcg gcacccgcaa acgctagagt
     2101 aatcgagaaa gcgcttaggt ttcaagcact cggaaagcgt ccgtccggcg ggacgagccg
     2161 ggcggcgagg gcgggctatc cgtgttagga cgaggttttg gcatggactt cctcgtcgtc
     2221 cggggtgcgg cgcagcacaa cctgaaaaat gtcagctgcg agctcccgcg taaccgcctc
     2281 gtcgtgatta ccgggccgag cggctccggc aagtcctcgc t
//
LOCUS       DATIML010000359         2664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_361846, whole genome shotgun sequence.
ACCESSION   DATIML010000359 DATIML010000000
VERSION     DATIML010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361846"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1163
                     /locus_tag="VLJ38_06185"
     CDS             <1..1163
                     /locus_tag="VLJ38_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU39132.1"
                     /translation="QFTRATQSDANAYQAFYSLGVVQERLNEISNALSSYRQATVIVP
                     DYEPAIFAYAVLLARSGKADQASDYLNGRAAAMPKSAAVSAALAEVKSIQGDSAAAQR
                     FAQDALKKNPDYAPAMIALARDHYRARRLDLALYTLRAILDGYGPENPPRDKNNAEAH
                     LLRGLIFKEQGNRPAAIDELEKALSIRPDLVEARVQLAAYMLESGNATGAAPLLEGAV
                     RYDNKNVLAHLNLGDAYRLLGKTADAKRELEWVQKADAQLAQVHYNLGLLYLFSDSVP
                     GTTPAQATDLAISELEQYKKMRPRQAGSNDDTDELITRAKAKKGMLDAGGDTGGTAAA
                     PAAKPGASSGAAATPAATAAPGAAAGSTKPAATGGANASFPAAPPATTPPKK"
     gene            1160..1417
                     /locus_tag="VLJ38_06190"
     CDS             1160..1417
                     /locus_tag="VLJ38_06190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39133.1"
                     /translation="MSSTMHLRYLLGFVLLAPSFAASPALAQNQKKGRVITISEVTIV
                     GRVQKPIAAVDVSRIQPKLTLAELKQPFVDRIEKSISHDPF"
     gene            1472..1966
                     /locus_tag="VLJ38_06195"
     CDS             1472..1966
                     /locus_tag="VLJ38_06195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39134.1"
                     /translation="MIFPSETAKFESELPGIGLVLAAWFAAASCGLISAWHLRRLLRL
                     APPTRNEVRARLDAQASAAERREIVQALREEGSEAERVLSLATLWPRSLARISLASGT
                     ALAVTSLAKGLGPAGSRLPGGLLEFSAGFVGMLVCAAFGRQARDVAAKLRQAWRDALR
                     AVSA"
     gene            2061..>2664
                     /locus_tag="VLJ38_06200"
     CDS             2061..>2664
                     /locus_tag="VLJ38_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HSU39135.1"
                     /translation="MTQGLTPGSTPSQRPGQMTAVMRAVAATGPKVLRIGVVQNGRVS
                     EERIIKQRVHVTVGPNEKNLFVVSGGNLPPSFRLFELVGNDYHLNFLDGMTGRLALPT
                     GISDLNMLRGQARRTAQGAYQVRLTEDSRGKVVIGDVTFLFQFVAPPPIQPKPQLPVA
                     VLRGASGIDWNTTMIAALSFLIHFLALGSIYSDWLDPVIDD"
BASE COUNT          465 a          902 c          855 g          442 t
ORIGIN      
        1 tgcaattcac gcgcgcgacg cagtccgacg cgaacgccta ccaagcattt tattcgctcg
       61 gtgtcgtgca ggagcgcttg aacgagattt cgaacgcgct ctcgagctac cggcaagcga
      121 ccgtgatcgt ccccgactac gagccggcca tcttcgcgta tgcggtgctg ctcgcgcgaa
      181 gcggcaaagc cgaccaagcg agcgattatt tgaacggccg cgccgcggcg atgccgaaga
      241 gcgcagccgt ctccgccgcg ctcgccgaag tgaagtcgat tcagggcgac tcggcggcgg
      301 cgcagcgctt cgctcaagac gcgctcaaga agaaccccga ctacgcgcca gcgatgatcg
      361 cgctcgcgcg cgaccattac cgcgcgcggc gcctcgacct cgcgctctac acgttgcgtg
      421 ccatcctcga cgggtatggc cccgaaaatc cgccgcgcga caagaacaac gccgaggcgc
      481 acctcctgcg cggcttgatt ttcaaggaac agggcaatcg ccccgccgcg atcgacgagc
      541 tcgaaaaagc gctcagcatc cgccccgatc tcgtggaggc ccgggttcag ctcgccgcgt
      601 acatgctgga atccggcaac gccacgggcg cggcgcccct gctcgagggc gccgtgcgtt
      661 acgacaacaa aaacgtgctc gcgcacttga acctcggcga cgcgtatcgg ttgctcggca
      721 agacggccga cgcgaaacgc gagctcgagt gggtccagaa ggcggacgcg cagctcgccc
      781 aagttcacta taatctcggc cttctgtact tgttctcgga tagcgtgccc ggaacgacgc
      841 cggcgcaagc gaccgatctc gcgatcagcg agctcgagca gtacaagaag atgcgcccgc
      901 gtcaggcagg ctcgaacgac gacaccgacg agctcatcac gcgcgcgaaa gccaagaagg
      961 gcatgctgga tgccggtggc gacacgggcg gcaccgcggc ggcgccagcc gcgaaaccag
     1021 gcgcttcgtc aggcgcggcg gccacgccgg ccgcgacggc tgcgcccggg gccgccgcag
     1081 gttcgacgaa gcccgcggct accgggggcg cgaacgcttc atttccggcg gcgccccctg
     1141 ccacaacccc tccgaagaag tgagttctac gatgcacctg cgttacctct tggggttcgt
     1201 tctgctcgcg ccgagcttcg cggcgtcgcc cgcgttagcg cagaatcaga agaagggtcg
     1261 cgtcatcacc atcagcgagg tgacgatcgt cggccgcgtg caaaagccga tcgcagccgt
     1321 ggacgtgagc cgtattcagc cgaagctcac gctcgccgag ctcaagcagc cgttcgtgga
     1381 tcgcatcgaa aagtcgattt ctcacgatcc tttttgacgc gactttcgcc gttttccgag
     1441 cggcggatcc gcgccgcgac tgacgccgat cgtgatcttt ccttccgaga ccgcgaaatt
     1501 cgagtctgag ctgcccggga ttggcctcgt gctcgcggcg tggttcgctg cggcgagttg
     1561 cggattgatt tccgcctggc acctgcgtcg tctgctgcgc ttggcaccac cgacacgaaa
     1621 cgaagtccgc gctcggctcg acgcgcaggc gagcgcggcc gagcgcaggg aaatcgtgca
     1681 ggcgcttcgc gaagaaggta gcgaagccga acgcgtgctt tcgctcgcaa cgctctggcc
     1741 gcgctcgctc gctcggatct cgctcgcctc gggcacggcg ctcgccgtga cgagtctggc
     1801 caaagggctc gggccggccg gttcgcgctt gcccggcggg ctgctcgaat tcagcgcggg
     1861 gttcgtcggt atgttggtgt gtgcggcctt cggccggcag gccagggacg tggcggccaa
     1921 gctccggcag gcctggcgtg acgcacttcg cgccgttagc gcctgagtag acccgcggaa
     1981 gaccctcagg ctagaatcct acggcgggaa cgggacgact cgctctattg tcgtagttcc
     2041 gaaggagacc gagcggcgcg atgactcagg gacttacccc aggttcgaca ccctcccagc
     2101 gtcccggaca gatgacggcg gtcatgcgcg ccgttgccgc gacgggcccc aaggtgcttc
     2161 gcatcggcgt cgtgcagaac ggccgcgtca gcgaagaacg catcatcaag caacgcgtgc
     2221 acgtcaccgt cggcccgaac gagaagaact tgttcgtggt cagcggcggc aacttgccgc
     2281 cgagctttcg tttgttcgag ctcgtcggca acgactacca cctgaatttt ctcgacggca
     2341 tgacgggtcg tctcgcgctg ccgacgggca tctccgacct caacatgctg cgtgggcagg
     2401 cgcgtcgaac cgcgcagggc gcctaccaag tgcgcctcac ggaggactcg cgcggcaagg
     2461 tcgtcatcgg cgacgtcacg ttcctcttcc agttcgtcgc accgccgcct attcagccga
     2521 agccgcagct gcccgtcgcc gtgctgcgcg gcgcgagcgg catcgactgg aacacgacga
     2581 tgatcgcggc gttgtcgttc ttgattcact tcctcgcgct cggctcgatc tactccgatt
     2641 ggctcgatcc cgtgatcgac gacg
//
LOCUS       DATIML010000360         1801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4114190, whole genome shotgun sequence.
ACCESSION   DATIML010000360 DATIML010000000
VERSION     DATIML010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4114190"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VLJ38_06205"
     CDS             complement(<1..494)
                     /locus_tag="VLJ38_06205"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSU39136.1"
                     /translation="MHGPVRVTATSTMADSTGFGRLRGRSGALCLAALLLGGCGDAGE
                     PQMQGVDTEAVTTTPKQSGIEHVVVVMMENRSFDHLLGWLPGADGRQAGLTYLDRAGA
                     AHATHPLAPDYQGCDHPDPDHSYAGGRVEYDNGASDGWLRAGENDDYAIGYYGSGDLR
                     FLGQA"
     gene            complement(563..>1801)
                     /locus_tag="VLJ38_06210"
     CDS             complement(563..>1801)
                     /locus_tag="VLJ38_06210"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: protein motif:HMM:NF015406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003904 - deoxyribodipyrimidine
                     photo-lyase activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HSU39137.1"
                     /translation="IERKGSRLLVLAGKSVEVVPRAAAELRVDRVVAQRWCEPFARER
                     DRRVAERLRVPFELFEGETLSPPGTLRTQAGEPFSVFTAFARAFTAQVELAAPVATPE
                     RLPPLPTDVTLASVPIPTASELGIVANARILRGGEAAAQARLQAFLAGPANEYDELRD
                     RMDLAGTSRLSADLKFGTLSPRRVLHELRHALRHLSAARRSFENELVWRVFTHSTLWD
                     FPHVLSEPFRPRWRDFPYVEDDAGWQAWTTGRTGYPVVDAAARQLLAEGFVHNRARMI
                     AASFLSKHLLIDYRRGERHYLEFLTDGDFANNNAGWQWSAGAGLDAQPYFRVFNPRLQ
                     GQKFDPDGDYVRRWVPELARLASAHIHAPSEAPRADLERAGITLGSTYPLPIVEHSVA
                     RARFLAVAESAVGPAGQRGR"
BASE COUNT          299 a          608 c          611 g          283 t
ORIGIN      
        1 gcctgcccga ggaagcgcaa atcaccactt ccataatatc caatcgcgta gtcgtcgttc
       61 tcgccggctc gtaaccagcc gtcgctcgcg ccgttgtcgt attcgacgcg cccgcccgcg
      121 taggaatgat ccggatccgg atgatcgcag ccctggtagt ccggtgcgag cgggtgcgtc
      181 gcgtgcgcgg cgcccgcccg atccaagtac gtgagacccg cttggcgtcc gtctgccccg
      241 ggcagccaac cgagcaggtg atcgaacgag cgattttcca tcatcacgac gacgacgtgc
      301 tcaatgcccg actgtttggg cgtcgtcgtt accgcctcgg tatcgacgcc ctgcatctgc
      361 ggctcgccgg catctccgca gccgccgagc agtagtgcgg cgagacagag cgccccgctg
      421 cgtcccctga gtcgcccgaa cccagttgaa tcggccatgg tgctcgttgc ggtcacgcgg
      481 acgggtccgt gcaagagccg tacttaccgc cgcgggcggc gggtaccgcg acgcaagcac
      541 ggcacgaaga atgtcgatgc gttcagcgcc cgcgctgtcc agcgggcccg accgcgcttt
      601 cggcgaccgc cagaaagcgg gcacgtgcga cggaatgttc gacgatgggc agcggatacg
      661 tcgagccgag cgtaatgccc gctcgttcga ggtccgctcg cggtgcttcg ctcggggcgt
      721 gaatgtgcgc cgaggcaagt cgcgcgagct cgggtaccca gcggcgcacg tagtcgccgt
      781 ccggatcgaa tttctggccc tgcagcctcg gattgaagac ccgaaagtac ggttgcgcgt
      841 cgagccccgc gcccgctgac cactgccagc cggcgttgtt gttggcaaag tcgccgtccg
      901 tcaaaaattc caggtaatgc cgctcgccac gccggtagtc gatgagcagg tgcttgctga
      961 gaaagctcgc cgcgatcatg cgcgcgcggt tgtgcacgaa gccttcggcg aggagctggc
     1021 gtgcggcggc gtcgacgacg ggatacccag tgcggcccgt ggtccacgct tgccagcccg
     1081 cgtcgtcctc gacatacggg aaatctcgcc accgcgggcg aaagggttcc gaaagcacgt
     1141 gcggaaagtc ccagagcgtc gagtgcgtga acacgcgcca gacgagctcg ttttcgaacg
     1201 agcgacgcgc ggcgctcagg tgccgcagcg cgtggcgcag ctcgtgcaag acgcggcgag
     1261 gcgacaaggt gccgaacttg aggtcggccg agagacggct cgtgccggcc aagtccatgc
     1321 gatcgcgaag ctcatcgtat tcgttcgccg gacccgcgag gaacgcctgc aggcgtgctt
     1381 gcgctgccgc ttcaccaccg cgcaagatgc gagcgttcgc gacgatgccg agctcgctcg
     1441 cggtcgggat gggcacgctc gcgagcgtca cgtccgtggg cagcggcggc agccgttccg
     1501 gcgtggcgac gggcgctgcg agctcgacct gtgcggtgaa cgcgcgcgca aaggccgtga
     1561 acacggagaa cggctcgccc gcctgcgtcc gtagcgtccc gggtggactc agggtttctc
     1621 cctcgaagag ctcgaaagga acgcgcaggc gctcggcgac gcgccgatcg cgttcacgtg
     1681 cgaacggctc gcaccaacgc tgcgcgacga ctcgatcgac gcgcagctcg gccgcggccc
     1741 ggggcacgac ctcgacgctc ttgcccgcca acacgagtag ccgcgagccc ttacgctcga
     1801 t
//
LOCUS       DATIML010000361         3128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4983505, whole genome shotgun sequence.
ACCESSION   DATIML010000361 DATIML010000000
VERSION     DATIML010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4983505"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..946
                     /locus_tag="VLJ38_06215"
     CDS             <1..946
                     /locus_tag="VLJ38_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional N-acetylglucosamine-1-phosphate
                     uridyltransferase/glucosamine-1-phosphate
                     acetyltransferase"
                     /protein_id="HSU39138.1"
                     /translation="VREQRDLGSDAERAVREVNAGVYAAKKSVLARAIADLKPMNAQG
                     ELYLTDVVAGVAAEGRVVALVGSPDALVGVNDRSQLREAEELLFARIRERLGREGVMV
                     HGDARIDDGVSVAPGAELEAGVRLRGATSIGPETRIDVGSVLTDATLGARVVVKPYSV
                     ISSSRVGDGAEIGPFAHLRPESEIEAEAHVGNFVETKKTRMRRGSKANHLAYLGDGDV
                     GERANVGAGTIFCNYDGYQKHRTVIGEGAFIGSDSQLVAPVRVGKGAFVGSGTTVTQD
                     VPDDALALSRTRQENKLDYGPKLRARLGEAARRAKEKK"
     gene            996..1553
                     /locus_tag="VLJ38_06220"
     CDS             996..1553
                     /locus_tag="VLJ38_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39139.1"
                     /translation="MANVKAAAVLARIKFIQEGFGDAGYARVLDALEPRIRERLSALV
                     LSQEWLPLACLTALIDTSDRVLGRGDGGLCREMARYAADANLTTLYRLFFRISSASFV
                     LSKASALWNVHYDSGRLECVEAVPKRIALRIADFDAPHCTHCQSVFAWAERSVELSGG
                     KNVSVTTGACRKRAASSCECTLTYQ"
     gene            complement(1603..2034)
                     /locus_tag="VLJ38_06225"
     CDS             complement(1603..2034)
                     /locus_tag="VLJ38_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39140.1"
                     /translation="MSTRTRLHPLARRVLVIATCCSLSACSFTPGGPEYTELGVRAED
                     GSNVVLGSACTPLPVLPGGTVVRDVTLAPGLSAHVLAVRDSVAVTLHGVEDRAAAQRD
                     FSQATLYDGFAETLSVTTETGGHYTVWFSAPCDATEAPQND"
     gene            complement(2031..2693)
                     /locus_tag="VLJ38_06230"
     CDS             complement(2031..2693)
                     /locus_tag="VLJ38_06230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39141.1"
                     /translation="MPSASPATSSPSAAPPAASGFQIAFRTGAMFPLGEASGAAADDL
                     ARRYAWQIPFLLDVGGRFARSFFVGGYLGFGIGATGSDARVDGACRDDDDNGRNDIAC
                     SAASFRIGVELEYSFAPDEPINPWIGYGIGFEGASASIKDDYAGLDETDASSGITFAD
                     FSAGFDLRHKVGFGPFIDVALGQYRETTTDLGARGKYHYTIEDRALHVWLTLGLRFVV
                     NP"
     gene            2671..2886
                     /locus_tag="VLJ38_06235"
     CDS             2671..2886
                     /locus_tag="VLJ38_06235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39142.1"
                     /translation="MAGDAEGTGGGGGAGGGGAGGGGADGGGAGGAAGIGPVGLGDGG
                     PGAALVAGAGSVSAAVGAAVAFGCAAT"
BASE COUNT          507 a         1033 c         1132 g          456 t
ORIGIN      
        1 ggtgcgcgag cagcgcgacc tcgggagcga cgccgagcgc gccgtgcgcg aagtgaacgc
       61 cggcgtctac gctgcgaaga aatccgtgct cgcgcgcgcc atcgcggact tgaagccgat
      121 gaacgcgcag ggtgagctct acctcacgga cgtcgtggcg ggcgtggcgg cggagggccg
      181 cgtcgtggcg ctcgtcggtt cgccggacgc gctcgtgggc gtcaacgatc gctcgcagct
      241 gcgcgaggcg gaagagctcc tgttcgcccg catccgcgag cggctcgggc gcgagggtgt
      301 gatggtgcac ggcgacgcgc gtatcgacga cggcgtgagc gtcgcgcccg gcgccgagct
      361 cgaagcgggc gtgcgcttgc gcggcgcgac cagcatcgga ccggagacgc gcatcgacgt
      421 gggctcggtg ctgacggacg cgacgctcgg cgcgcgcgtc gtcgtgaagc cgtattcggt
      481 gatcagctcg agccgcgtgg gcgacggcgc cgaaatcggc ccgttcgcgc acctgcgccc
      541 ggagagcgaa atcgaagccg aggcgcacgt cggcaacttc gtcgagacga agaagacgcg
      601 catgcgccgc ggctccaagg caaaccacct cgcctacctc ggtgacggcg acgtgggcga
      661 gcgcgccaac gtcggcgccg gcacgatttt ctgcaactac gacggctacc aaaagcaccg
      721 caccgtgatc ggcgagggcg cgttcatcgg cagcgattcg cagctcgtcg cgcccgtccg
      781 cgtcggtaag ggcgccttcg tcggcagcgg cacgaccgta acccaagacg tgcccgacga
      841 cgcgctcgca ctttcgcgca cacgtcagga aaataagctc gattacggcc cgaaactccg
      901 agcacggctc ggcgaagcgg cgcggcgcgc gaaagaaaag aagtaagcag actgtcgccc
      961 cgtgcgcgcg gggaacttgg tactctcggg tccgcgtggc gaacgtcaaa gcggccgcgg
     1021 tgctcgcgcg gatcaagttc atccaggagg gcttcggcga tgcggggtac gcgcgcgtgc
     1081 tcgacgcgct cgagccgcgc attcgcgagc gtctgagcgc gctcgttttg tcccaagaat
     1141 ggctgccgct cgcgtgcctg acggcgctca tcgacacgtc ggaccgcgtg ctcgggcgtg
     1201 gcgacggcgg gctttgccgc gagatggcgc gctacgccgc cgacgccaac ctgacgacgc
     1261 tttaccgcct cttctttcgg atttcgagcg caagcttcgt cttgagcaag gcgagcgcgc
     1321 tctggaacgt ccactacgat tccggccggc tcgagtgcgt agaagccgta cccaaaagga
     1381 tcgctctacg tatcgccgac ttcgatgcgc cgcattgcac gcactgccag agtgtcttcg
     1441 cctgggccga gcgctccgtg gagctctcgg gcggcaagaa cgtgagcgtc acgaccggcg
     1501 cctgccgcaa gcgggccgcg agctcgtgcg agtgcacgct cacgtatcag tgagtcgcga
     1561 gtacgagcca ctccggcgtt tgccgtctct ggcgaagcga ggctagtcgt tctgcggggc
     1621 ttcggtggcg tcacacggcg cgctgaacca caccgtatag tgaccgccgg tttcggtcgt
     1681 gacggagagc gtttcggcga acccatcgta aagcgtcgcc tgggagaaat cgcgctgggc
     1741 cgccgctcga tcctcgactc cgtgcaacgt cacggcgacc gagtcgcgta cggccaagac
     1801 gtgcgcggag agaccgggcg cgagcgtcac gtcccgcacg acggtgccgc ccggcagcac
     1861 cggcagcggc gtgcaggcgc tgccgagcac gacgttcgag ccgtcttcgg cgcgcacgcc
     1921 gagctcggta tattcggggc cgcccggtgt gaacgagcag gccgaaagcg agcagcacgt
     1981 cgcgatcacg agcacgcgtc gtgcgagagg atgcagtcgc gtgcgcgtgc tcatgggttc
     2041 accacgaaac gtagaccgag cgtgagccag acgtggagcg cgcggtcctc gatcgtgtaa
     2101 tggtacttgc cgcgcgcgcc gagatcggtc gtcgtctccc ggtattgtcc gagcgccacg
     2161 tcgatgaagg ggccgaagcc gaccttgtga cgcaagtcga agccggcgct gaaatcggcg
     2221 aaagtgatgc cgctgctcgc gtcggtttcg tcgagtccgg cgtagtcgtc cttgatggac
     2281 gcgctcgcgc cctcgaagcc gatgccgtag ccaatccagg gattgatagg ctcgtcgggg
     2341 gcgaaggagt actccagttc cacgccgatg cgaaatgacg ccgcgctgca cgcgatgtcg
     2401 ttcctgccgt tgtcgtcgtc gtcgcggcag gcgccgtcga cgcgcgcatc gctgccggtc
     2461 gcgccgatgc cgaagccgag gtaaccgccc acgaagaacg agcgtgcaaa ccgcccgccg
     2521 acatcgagca agaacgggat ctgccaggcg tagcggcgcg cgaggtcgtc cgccgccgct
     2581 cccgaagctt cgccgagcgg gaacatcgcg cccgtgcgaa aggcgatttg aaagccgctc
     2641 gccgcgggcg gagcggcgct cggcgaggac gtggcaggcg atgccgaggg cacgggaggt
     2701 ggcggtggtg cgggcggcgg cggtgcgggc ggcggcggtg cggacggcgg cggtgcgggc
     2761 ggcgctgccg gcattggacc cgtcggactc ggcgacggcg gcccgggtgc cgcgctcgtg
     2821 gctggagctg gctctgtgag tgccgcggtc ggagcggcgg tcgcgttcgg ttgcgcggcg
     2881 acgtgaacgc tcgctagccc aagccccgac agggaagcga tcgcgaaccg atgccgcatc
     2941 agccgtacac tctacacggc gccgcggccg aatccgcagg cttcttcagc tcgaacgggc
     3001 ggacacgaac cacgtgctcg aagggccgta caccccgccc tcgctcacga acggcgcgag
     3061 cgcgtcacgc agcgcggcgt cgacgcgcgc actctcgtcg atgccctgcg ctgccgcgag
     3121 ccgtagca
//
LOCUS       DATIML010000362         1612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1517232, whole genome shotgun sequence.
ACCESSION   DATIML010000362 DATIML010000000
VERSION     DATIML010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1517232"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VLJ38_06240"
     CDS             complement(<1..500)
                     /locus_tag="VLJ38_06240"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HSU39143.1"
                     /translation="MLGCLVGALLGPRAHWLELPARLILRCLGAVAPVLILLAIMRSI
                     ITANIRGRVALRLLGLLLVNTLVAIGVGLFVANVLGPGTGSAVLLPASRTSLPVDIAD
                     QVWSQIPDSLFRPFVDNNVIGVVLIAAAFGLAARQLRQDARRFTETFTSVALDATGVV
                     LSWLIAL"
     gene            complement(604..>1612)
                     /locus_tag="VLJ38_06245"
     CDS             complement(604..>1612)
                     /locus_tag="VLJ38_06245"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39144.1"
                     /translation="KEDLAADPDARELAESILQASQHAAELTRQLLAYSRKAQMLLVA
                     TDLHHVITSAVSLLRRSIDPSIEVVSVLEAQRATVAADRALLESALLNLLVNGRDAMP
                     EGGTLRVHTRSLELPASGTPSGPCVLLEISDSGSGIAPELLPQIFDPFFTTKPLGRGT
                     GLGLAAVSGTIKAHGGRIEVSSALGRGTTFRIYLPTIEQPDSQPRPAEHESPHGRGEI
                     LLVEDDAMVSLTAVATLKSLGYAVTHASAGQAAIELLRQHPGRFALVLLDLRMPGMSG
                     EATFEALRELDPTLRVLIWSGYAAEQDVSTMLARGAAGFVQKPYRITELSQAIARALK
                     A"
BASE COUNT          281 a          522 c          570 g          239 t
ORIGIN      
        1 agcgcgatca gccacgagag gacgaccccc gttgcgtcga gcgcaacgga cgtgaacgtc
       61 tcggtgaagc gccgcgcgtc ctgccgcagt tgccgcgccg cgagcccgaa cgccgccgcg
      121 atcagcacca cgccgatcac gttgttgtcg acgaacggac ggaacagact gtcggggatc
      181 tggctccaaa cctgatcggc gatgtcgacc ggcaggctgg ttcgcgacgc gggtagcaga
      241 accgccgagc cggtgccggg gccgagcaca ttggccacga acagcccgac accaatcgcc
      301 accagcgtat tgacgagcaa gagaccgagc aagcgcagcg cgacgcgtcc gcggatattc
      361 gcggtgatga tcgagcgcat gatggcgagc aggatcagca ccggcgcgac ggcgcccagg
      421 cagcgcaaaa tcagccgcgc gggcagctcg agccagtgtg cccgcggtcc aagcagggcg
      481 ccgacgaggc agccgagcac cagcgcgacg aggatgcgca gataaagtgg aaaccgctgc
      541 ggcggctcgg cctcggccga cgccggctcc tgctcgctgg actcgtgagg catggcgtga
      601 gcgctaggcc ttgagggcgc gcgcgatggc ctggctgagc tccgtgatgc gatacggttt
      661 ctgcacgaaa cccgcggcgc cgcgtgcgag catcgtgctc acgtcttgct cggctgcata
      721 gcccgaccag atcaggacgc gcagcgtggg atcgagctcg cgtagcgcct cgaaggtcgc
      781 ttcgccgctc atgcccggca tgcgcaggtc gagcagcacg agcgcaaagc ggcctggatg
      841 ttggcgcaag agctcgatcg cggcttgccc cgcgctcgcg tgcgtcaccg catagccgag
      901 tgacttgagc gtcgcgaccg cggtcaggct caccatcgcg tcgtcttcca ccaacaggat
      961 ttcaccgcgg ccatgcgggc tttcgtgttc ggcggggcgc ggttgcgagt cgggctgttc
     1021 gatggtcggc aaataaatcc gaaacgtcgt gccccggccg agcgcgctag agacttcgat
     1081 gcggccgccg tgcgccttga tggtacccga aacggcggcg aggccgagac ccgtcccgcg
     1141 accgagcggt ttagtggtga aaaaggggtc gaaaatctgc ggcaggagct cgggcgcgat
     1201 gccgctgccg ctgtcgctga tttcgagcag cacgcacggt ccgctcggcg tacccgaagc
     1261 gggcagctcg agcgagcggg tgtggacgcg gagcgtaccg ccttccggca tcgcgtcgcg
     1321 tccgttaacg agcagattca agagcgcact ctcgagcagg gcacgatcgg cggcgaccgt
     1381 ggcacgttgc gcttcgagca cgctcacgac ttcgatgctc gggtcgatcg agcggcggag
     1441 cagcgaaacc gcgctcgtga tcacgtggtg cagatccgtc gctaccagca gcatttgcgc
     1501 tttgcgcgag taggcgagca gctggcgcgt gagctcggcg gcgtgctggg acgcctgcag
     1561 gatgctctcg gcgagctcgc gcgcatccgg gtcagccgcg aggtcctcct tg
//
LOCUS       DATIML010000363         1720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1230164, whole genome shotgun sequence.
ACCESSION   DATIML010000363 DATIML010000000
VERSION     DATIML010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1230164"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VLJ38_06250"
     CDS             <1..415
                     /locus_tag="VLJ38_06250"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39145.1"
                     /translation="ESIVETARILVVDDEEDARGLVGAILEECGCEVTLASSVEEAMQ
                     RLREAPPDVLLSDIGMPEADGYDLIEQVRALPREQGGDMPAAALTAYARPEDRRRLLN
                     AGYSIHLAKPIEPAELVAVVTTLTRFTVRSDPPSR"
     gene            421..>1720
                     /locus_tag="VLJ38_06255"
     CDS             421..>1720
                     /locus_tag="VLJ38_06255"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSU39146.1"
                     /translation="METSQPADAPDPTKESVPREQRDDALRETIQRLRQSEAALSELA
                     RALSADEVSAVLLGFCERVLGAAAGTVYLTDDDEQRLKLRGSRGVATSERPAVLTPDL
                     PFPLATAIKKREPVWIESHAALVLAYPALAEMETPRERVQSVVALPLVHLGRLVGGLA
                     LSFERPQSFSTADRSWLAGFAAQAALAAERARLYEAEKRARAEAEALFRINESLNAAR
                     LDLETLAQRVTDEATALVGAGFGAFFYDVVNEQGESYLLYTVSGAPREAFTRFGLPRN
                     TPIFAPTFAGEGVVRLADVKQDPRYGSMAPHHGIPPGHPPVTSYLAVPVISRTGAVLG
                     GLFFGHPEPDRFSEQHERMVKAVAASAAAAIDNARLFRATVDAEETQRRLVAELSETV
                     RLNDLFTGVLAHDLRNPLGAILSSAEVASRTPAAARDEAQL"
BASE COUNT          281 a          607 c          587 g          245 t
ORIGIN      
        1 tgaatcgatc gtggagaccg cgcgcattct cgtggtcgac gacgaggaag acgcgcgcgg
       61 gctcgtcggg gccatcctag aggagtgcgg ctgcgaggtg acgctcgcta gcagcgtcga
      121 agaggccatg caacggctgc gagaagcgcc ccccgacgtg ctgctctccg acatcggcat
      181 gcccgaggcc gacggctacg acctcatcga gcaggtgcgc gcgctgccgc gcgagcaggg
      241 cggcgacatg ccggccgcgg cgctcacggc gtatgcgcgc cccgaggatc gccgccgcct
      301 gctgaacgcg ggctattcga tacacttggc caagccgatc gaaccggccg aactcgtggc
      361 cgtcgtgacg acactcacgc gcttcacggt cagaagcgac ccaccttcgc gctgagccgc
      421 atggaaacct cgcagcccgc cgacgcaccg gatccgacca aagaaagcgt gccacgcgag
      481 cagcgggatg acgcgctgcg cgagaccatc cagaggctgc gacaatccga agcggccctg
      541 tccgagctcg cgcgggcgct gagcgccgac gaggtgtcgg ccgtgctgct cggcttctgc
      601 gaacgcgtgc tcggcgcggc ggcgggcacg gtgtacttga ccgacgacga cgagcagagg
      661 ctcaagctcc gaggctcgcg cggcgtggcc acgtcggaac ggcccgccgt gctcacgccg
      721 gaccttccgt tcccgctcgc gaccgcgatc aagaagcgcg aaccggtctg gatcgagagc
      781 catgccgcgc tcgttctggc ctaccccgcg ctcgccgaga tggagacgcc gcgcgagcgc
      841 gtgcaatccg tcgtggcctt gccgctcgtt catctcggac gcttggtcgg cggactcgcg
      901 ctgagcttcg agcggccgca atcgttcagc accgcggaca ggagctggct cgcgggtttc
      961 gcggcacagg cggcgctcgc ggccgaacgc gcgcggctgt acgaagccga gaagcgagcc
     1021 cgcgccgagg ccgaagcgct gtttcgcatc aacgaatcgc tgaacgccgc gcggctcgat
     1081 ctcgagaccc tcgctcagcg ggtcacggac gaagcgacgg cgctcgtcgg cgccggcttc
     1141 ggtgcgttct tttacgacgt cgtcaacgag cagggcgagt cgtaccttct ctatacggtg
     1201 tccggtgcgc cccgagaggc gttcacgcgc ttcggcttgc cccggaacac cccgatcttc
     1261 gcgccgacgt tcgccggcga aggcgtcgtg cgcctcgcgg acgtgaagca ggatccgcgc
     1321 tacggcagca tggcgccgca ccacggcatc ccgccgggcc atccgcccgt gacgagctac
     1381 ctcgccgtgc ccgtgatttc gcggacgggc gcggtgctcg gcggactgtt cttcggtcat
     1441 ccggaacccg atcgcttcag cgaacaacat gaacggatgg tgaaggccgt cgcggcgagc
     1501 gcagcggccg caatcgacaa cgcacggctg tttcgagcga ccgtcgacgc cgaggagacg
     1561 caacgacgac tggtcgccga gctcagcgag accgtgcgct tgaacgacct cttcaccggc
     1621 gtgctcgccc atgacctcag aaatccgctg ggcgccatcc tgagctcggc cgaggtcgcg
     1681 agccggactc ccgccgccgc tcgcgacgag gcacagctcg
//
LOCUS       DATIML010000364         1870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2093684, whole genome shotgun sequence.
ACCESSION   DATIML010000364 DATIML010000000
VERSION     DATIML010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2093684"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1810
                     /locus_tag="VLJ38_06260"
     CDS             <1..1810
                     /locus_tag="VLJ38_06260"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSU39147.1"
                     /translation="GTNGVAGNTYGGLGYKYNISPTGDTLYGWRQFTPRDIYQTVTDQ
                     GIQRFITSLQTNWRPLEWLSGRSNVGLDYANRLDTQLCRFGECPDLGGDSRAGFKIDN
                     RTNFFTYTADASATATKSLSQTIVSKTTAGVQYNRGVFDRNGAQGTLLAPGAVTITGA
                     ANKTADESTSETRTLGGFVEENVAFNERLYLTGALRTDRNSAFGANFKTALYPKLSAS
                     WVLSEEKFFPTPGWLTQLRLRSAYGASGVQPGTIDAVRYYSSTTARLESGDTPALVFS
                     TLGNSELKPERSTELEVGIDATFWGGRLGTEFTYYDKSSRDALISRVLPPSNGTGATS
                     RLENLGEVTNKGFEALVTATPVQLRTFAWDVTLNGSANANKLVTLGGVPNIVSSSTQQ
                     QREGYPLNGWWSRQLLGYQDKNGDGLITYNADPNVSEIVVSDTTQYLGNPLPRIELAL
                     TNGFTFYKNLRLGAMIDYKGKFKLYNNTERIRCLSRNNCSGLINPNATLLQQARTVAG
                     RDHPAKTVAGFIEDGDFIRFRELNLSYSASPTFVTRYLRGRTLSLTGAVRNLGILWTK
                     YTGVDPEAFGTTGDAPSEFQAFGPPTYFSLRLSLGF"
BASE COUNT          332 a          668 c          593 g          277 t
ORIGIN      
        1 cggaacgaat ggcgtcgcag gcaacaccta cggtgggctc ggctacaagt acaacatctc
       61 gccaacaggc gacacgctct acggttggcg ccagttcacg ccgcgtgaca tctaccagac
      121 cgtcaccgat cagggcattc agcgtttcat cacatcgctg cagacgaatt ggcgtccgct
      181 cgagtggctg tctggacgca gcaacgtcgg cctcgattac gcaaaccgac tcgacacgca
      241 gctgtgccgc ttcggcgagt gcccggacct cggcggcgat tcgcgcgccg ggttcaagat
      301 cgacaaccgc acgaacttct tcacgtacac ggccgacgcg agcgccacgg ccacgaagtc
      361 gctgtcgcag acgatcgtgt ccaagacgac cgccggcgtg cagtacaacc gcggtgtctt
      421 cgaccgcaac ggcgcacagg gcacgctgct cgcgcccggc gcggtgacga tcaccggcgc
      481 ggcgaacaag acggccgacg agtcgacgag cgagacgcgc acgttgggcg gcttcgtcga
      541 ggagaacgtc gcgttcaacg agcggctcta cctcaccggc gcgctgcgca cggaccgcaa
      601 cagcgcgttc ggcgcgaact tcaagaccgc gctctacccc aagctctccg cgtcgtgggt
      661 gctctccgag gagaagttct tcccgacgcc cggctggctc acgcagctcc gcctgcgctc
      721 cgcgtacggc gcctccggcg tgcagccggg gacgatcgac gcggtgcgct actactcgtc
      781 gacgacggcg aggctcgaga gcggcgacac gccggcgctc gtgttcagca ccctcggcaa
      841 cagcgagctg aagccggagc gctccacgga gctcgaggtc gggatcgacg cgacgttctg
      901 gggcgggcgg ctcggcaccg agttcacgta ctacgacaag tcgtcgcgcg acgcgctcat
      961 cagccgcgtg ctgccgccgt cgaacggcac cggcgcgacg tcgcggctcg agaacctcgg
     1021 cgaggtgacc aacaaggggt tcgaggcgct cgtcaccgcg acgccggtgc agctccgcac
     1081 cttcgcgtgg gacgtcacgc tcaacggctc ggcgaacgcg aacaagctcg tgacgctcgg
     1141 cggcgtgccg aacatcgtgt cgagcagcac gcagcagcag cgcgaggggt acccgctcaa
     1201 cggctggtgg tcgcgccagc tcctcggcta ccaggacaag aacggcgacg gcctgatcac
     1261 ctacaacgcc gacccgaacg tcagcgagat cgtcgtcagc gacaccacgc agtacctcgg
     1321 caatccactg ccgcgcatcg agctcgcgct gacgaacggc ttcacgttct acaagaacct
     1381 gcggctcggc gcgatgatcg actacaaggg caagttcaag ctgtacaaca acaccgagcg
     1441 gatccgctgc ctgagccgca acaactgctc ggggctgatc aatccgaacg cgacgctgtt
     1501 gcagcaggcg cgcacggtcg ccggccgcga ccacccggcg aagacggtgg cgggcttcat
     1561 cgaggacggc gacttcattc gcttccgcga gctgaacctg agctacagcg cgtcgccgac
     1621 gttcgtcacg cgctacctgc gcgggcgcac gctgtcgctc accggcgcgg tgcgcaacct
     1681 cggcatcctg tggaccaagt acacgggcgt cgatcccgag gcgttcggca cgaccggcga
     1741 cgccccgtcg gagttccagg cgttcggccc gccgacctac ttctcgctcc gtctctccct
     1801 cggcttctga tgcgttcccg tctcgcttcc gcccttggcg cgctcgcgtt aggcgccctc
     1861 gccgcctgca
//
LOCUS       DATIML010000365         6522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2382499, whole genome shotgun sequence.
ACCESSION   DATIML010000365 DATIML010000000
VERSION     DATIML010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6522
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2382499"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VLJ38_06265"
     CDS             <1..724
                     /locus_tag="VLJ38_06265"
                     /inference="COORDINATES: protein motif:HMM:NF014755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HSU39148.1"
                     /translation="KGEYVVLSEGDFKAANAEATRQVDILDFVEYSSIDPRFLVRPYY
                     LTPQKAGRKAYALLRETLRRTDKAGIGKIVIRTRQHLAALVARDKALILVLLRFADEL
                     RDERDLDLPETNLSKLGVTPKEIQMAEHLVESMVTDFEPKKYIDEYRRDLTRLIQRKV
                     KAGEVNQVPEGGEAREPKPAANVIDLSSLLANSLSGTKSGPKKASRTKAKPHAHPRTA
                     HPRKQATHRTRTTHHAARRKSA"
     gene            745..3246
                     /gene="ligD"
                     /locus_tag="VLJ38_06270"
     CDS             745..3246
                     /gene="ligD"
                     /locus_tag="VLJ38_06270"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HSU39149.1"
                     /translation="MPTLAKYRKMRDFSRTAEPRGEPAKGRKPATRKAPKQLSFVIQR
                     HEARRLHYDFRLELGGVLLSWAVPKGPSLNPADKRLAVETEPHPLEYGKFEGTIPKGE
                     YGAGNVTIWDHGTWEPEGDAARDFERGRLTFKLHGEKLNGSWHLVRTRTRDSAKDEKN
                     WLLMKSRDEFADAGDGAPRGGSGRKDDGEPKSAPRQRASAAPARRRKTSTTIEHVEPE
                     LATLVSAAPEGDAWVHELKFDGYRLLARVAGGDVGLFTRHGHDWSERMPALVRALSRI
                     EVDAWLDGEVVVLDERGVSNFQRLQNSLSEGQAGPLVFYVFDLLELDGTDYRNEPLTE
                     RKRVLAELWKRLPPDVKRTLRLSDHVVGKGPEFFEQACKLGVEGIVSKRADAPYRSGR
                     GRDWLKVKCLKRQEFAIVGYTEPSGSRSHLGALLIAVNGPHGFRYAGRVGTGFTAASL
                     AELHRALAPLARDKPPDLENAPRGADARGVHWVEPKLAAEVAFTEMTEDGVLRHPSFQ
                     GLREDKSAAEAREERPADVSEARPAPRGARAPRRAKTNDYPLSNPDKILYPEQGITKR
                     ELLDYYALVAERMLPHVKDRPLTLVRCPNGYDKPCFFQKHPGEGVPAKVRSVPIEEKG
                     GATQYSVIDDVEGLFGLVQLGALEIHTWGSHADDAEHPDIVVFDLDPDPDVDFGEVCR
                     AAQELRRVFEAAKLETFVKTAGGKGLHVCLPIAPELTWREAKDFTQRIAEEFVRRSPD
                     KFVATVSKSKRRGKIFIDYLRNGRGATFVAPYSTRARKNAPIATPLEWDELGPKLKPD
                     GFTLRNIAQRLAKQRHDPFERMAQTTQSLRALLGK"
     gene            complement(3300..3707)
                     /locus_tag="VLJ38_06275"
     CDS             complement(3300..3707)
                     /locus_tag="VLJ38_06275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39150.1"
                     /translation="MKFQLLAAACVALTALAGCTVDSGPSRVVVVGDGSLVVDWTIEG
                     AKDSRDCAAMGADSIDVVVSTAAGDFVGDFGGYCEDFAVDIQLAPGAYYGSATLLDAA
                     GRPRTTSVDLGSFRILGDDELHVPIDFPLDSFF"
     gene            complement(3724..4152)
                     /locus_tag="VLJ38_06280"
     CDS             complement(3724..4152)
                     /locus_tag="VLJ38_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39151.1"
                     /translation="MSPRAVLFRCSLAIAACALTGCYAEATTGADVEYAAPVANVEVY
                     PHEYYDGHVVYLVNDRWYYREGPHWVYYRSEPAPLYQRRTVIVHSRPTVVRERAQVRS
                     APPAHYYSAPVRTAPPARRYVAPPARTAPPARGEHRGYRM"
     gene            4164..4802
                     /locus_tag="VLJ38_06285"
     CDS             4164..4802
                     /locus_tag="VLJ38_06285"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSU39152.1"
                     /translation="MQSSCRDVGASGAYRASAAARLPQPGTNATRFYLHGNGTVTEAD
                     NAVVRALQHARSFESLRLELLDGKENAMICSEIMKSEIECVAPTDTAGDAARKMRDHN
                     VGFLPVCDDSLQVVGTLTDRDLALRVVAEGRPMTTPVAELMTHEVVSCRSTDNLSRAE
                     ELMGLFRVSRMLCVDEDGLLAGVISLSDIAQHETLSRVAQTLRDVTMREIAP"
     gene            complement(4807..5958)
                     /locus_tag="VLJ38_06290"
     CDS             complement(4807..5958)
                     /locus_tag="VLJ38_06290"
                     /inference="COORDINATES: protein motif:HMM:TIGR00486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HSU39153.1"
                     /translation="MGLSLARTVELLERIAPLAYAEDWDNVGLLLEPLGDRRAQGEPP
                     SIRRALVTIDLTEAVLEEALAQDVDLVVAYHPPVFRPLKRLGTRGSAERALQRLARAG
                     TAIYSPHTALDAAPGGVNDWLAAGAGPGEITPLVEANTLDPAAAFKLVTFVPAEQVDA
                     VASALSGAGAGVIGEYRECSSRTPAVGTFLGGPATDPAVGQRGKLEHVDEIRLEMVCP
                     KHALGRAARVLRDVHPYEEPAWDVYPLAARPAAGFGQGRGVTLETPVPLETLVRRLKT
                     HLGRASLRVAATEAQRGGAVVRRVAVCAGSGAGVFERAPGFDAYVTGELSHHAVLATL
                     GSGASIVLAEHSTTERGYLPEYAQRLQDLAEGALEVVVAQRDREPLEQW"
     gene            complement(5963..>6522)
                     /locus_tag="VLJ38_06295"
     CDS             complement(5963..>6522)
                     /locus_tag="VLJ38_06295"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HSU39154.1"
                     /translation="TLELLAPFLESATDLGESLHLLEDILPARLLVLEFATRLAAERA
                     DKDDIARLRDITDLVIAAFERADPTLIGHGFQRWLDALVDAGHSVAVRWIANPFLEAY
                     REIIDRFPALWVLEPSFPQYLREFNAALESADTERAVTVSRAYYQRVDGTFMQALKAI
                     MSHRKSGPFASSEPLEDEAPDEPRH"
BASE COUNT         1178 a         2144 c         2230 g          970 t
ORIGIN      
        1 gaagggggaa tacgtcgtgc tcagcgaggg cgatttcaag gccgccaatg ccgaggcgac
       61 gcggcaggtc gatatcctcg atttcgtcga atactcctcg attgacccgc gcttcctcgt
      121 gcggccgtat tacctcacgc cgcaaaaagc gggacgcaag gcctatgcgc tcttgcgcga
      181 gacgctgcgc cggaccgaca aagcgggcat cggtaagata gtgattcgca cgcggcagca
      241 cctcgcggcg ctcgtcgcgc gcgacaaggc gctgattttg gtcctgctgc gctttgcgga
      301 cgagctccgt gacgagcgcg acctcgacct gccggagacg aacttgagca agctcggggt
      361 cacgcccaaa gaaattcaga tggccgagca cctcgtcgag agcatggtca ctgacttcga
      421 gccgaaaaaa tacatcgatg agtaccggcg cgacctcacg cgcctgatcc agcgcaaggt
      481 caaggcgggc gaagtgaatc aggtacccga gggcggcgaa gcgcgggagc cgaagcccgc
      541 cgccaacgtc atcgatcttt cgagcctgct cgccaacagt ttgtccggta ctaagtcggg
      601 gcctaaaaag gcgtcgcgca cgaaagccaa gccgcatgca cacccgcgga ccgcgcaccc
      661 gcgcaagcaa gcgacgcatc ggacccgaac gacgcaccac gcggcgcggc gtaagtcggc
      721 ctgaaagcag cgaggacgcg ccacatgccg acgctcgcga aataccgaaa aatgcgcgac
      781 ttttcgcgca cagccgagcc gcgtggcgag ccggcgaagg gccgcaaacc ggcgacgcgc
      841 aaagcgccca aacagctctc cttcgtcatc cagcggcacg aagcgcggcg actgcattac
      901 gactttcgct tggagctcgg cggggtgctc ttgagttggg ccgtgccgaa gggaccaagc
      961 ctgaatcccg cggacaaacg gctggcggtc gaaaccgagc cgcatccgct cgaatacggg
     1021 aaattcgagg gcaccatccc caagggtgag tacggcgccg gcaacgtgac catctgggat
     1081 cacggcacgt gggagccgga aggcgacgcc gcacgcgact tcgagcgggg tcgcctcacg
     1141 ttcaagctcc acggcgaaaa gctgaacggc agctggcacc tcgtgcgcac cagaacgcgc
     1201 gattcggcga aagacgagaa gaactggcta ctgatgaagt cgcgagacga gttcgcagac
     1261 gccggtgacg gcgcgccgcg gggtggctcc ggtcgcaagg acgacgggga gcccaagtcg
     1321 gcgccccgac agcgcgccag cgccgcgcca gcgcggcgtc gcaagacctc gacgacgatc
     1381 gagcatgtcg agcccgagct tgcgacgctc gtcagcgccg cgcccgaagg cgacgcttgg
     1441 gtccacgagc tcaaattcga cggctatcgg ctgctcgcgc gcgtcgcggg cggcgacgtc
     1501 gggctcttca ctcgccacgg tcacgactgg agcgagcgca tgccggcgct cgtgcgtgcc
     1561 ttgtcgcgca tcgaggtcga cgcgtggctc gacggtgaag tcgtcgtgct cgatgagcgc
     1621 ggcgtctcga atttccagcg cttgcagaat tcgctcagcg agggccaggc aggcccgctg
     1681 gtcttctacg tgttcgattt gttggagctc gacggcaccg attaccggaa cgagccgctc
     1741 acggaacgaa aacgtgtgct tgcggagctc tggaaaagac tgccgcccga cgtgaagagg
     1801 acgctgcgct tgagcgacca cgtcgtcggt aagggccccg agttcttcga gcaggcgtgc
     1861 aagctcggcg tcgagggcat cgtctccaag cgcgccgacg cgccgtaccg ctcgggccgc
     1921 ggccgcgact ggctcaaggt taaatgcctg aaacgccagg agttcgcgat cgtcggctac
     1981 acggagccga gcggctcgcg ctcgcatttg ggcgcgctgc tcatcgccgt caacgggccg
     2041 cacggcttcc ggtacgcggg tcgcgtgggg acgggcttca cggcggcatc gctcgccgag
     2101 ctccaccgcg cgctcgctcc gctcgctcgc gacaagccgc ccgacctcga aaatgcgccg
     2161 cgcggcgccg atgcgcgcgg cgtgcactgg gtcgagccga agctcgccgc agaagtcgcg
     2221 tttaccgaaa tgacggagga cggcgtgctc cgtcacccga gctttcaggg cctacgcgag
     2281 gacaagagcg ccgcggaggc gcgcgaagag cggcccgcgg acgtcagcga ggctcggccc
     2341 gcgccgcggg gggcacgcgc gccacgccgc gcgaagacga acgactaccc gctctcgaac
     2401 ccggacaaga tcctttaccc cgaacaaggc atcaccaagc gcgagctgct cgactactac
     2461 gcgctcgtcg ccgagcggat gctgccgcac gtgaaggacc gtccgctcac gctcgtgcgc
     2521 tgcccgaacg ggtatgacaa gccgtgcttc tttcagaagc atccggggga aggcgtgccg
     2581 gcgaaggtgc gttcggtgcc gatcgaagag aagggcgggg ccacgcagta cagcgtgatc
     2641 gacgacgtcg aaggcttgtt cggcttggtc cagctcggtg cgctcgagat ccacacgtgg
     2701 ggttcacacg cggacgacgc cgagcatccc gacatcgtcg tgttcgatct cgatccggat
     2761 ccggacgtcg atttcggcga ggtgtgtcgt gcggcgcaag agctccggcg cgtcttcgaa
     2821 gccgccaagc tcgagacttt cgtgaagacg gcgggcggca agggactgca cgtgtgcttg
     2881 ccgattgcgc ccgagctcac ttggcgcgaa gcgaaagatt tcacgcagcg catcgccgag
     2941 gagttcgtgc gtcgttcgcc cgacaagttc gtcgcgacgg tgagcaaaag caagcggcgc
     3001 ggcaagatct tcatcgatta cttgcgcaac gggcgcggtg cgactttcgt ggcgccgtat
     3061 tcgacgcgag ctcggaagaa tgcgccgatc gcgacgccgc tcgagtggga cgagctcggg
     3121 ccgaagctca agcccgacgg gttcacgctg aggaacatcg cgcagcggct cgcgaagcag
     3181 cgtcacgatc cgttcgagcg tatggcacag acgacacagt cgctacgcgc gctgctcggg
     3241 aaatgacgcc cgcggcgcgc gctgctgggg cccgttcaac caactgaacg ggccgaagct
     3301 cagaagaaag agtcgagcgg aaagtctatc gggacgtgga gctcgtcgtc gccgaggatg
     3361 cggaaagagc cgagatcgac cgacgtcgtg cgcgggcgtc cagcggcgtc gagcaacgtg
     3421 gcgctgccgt agtacgcgcc gggggcgagc tggatgtcga ccgcgaagtc ctcgcagtac
     3481 ccgccaaagt cgcccacgaa gtcgccggcg gcggtactga ccaccacgtc gatgctgtcg
     3541 gcgcccatcg ccgcacaatc acgcgagtcc ttggcgcctt cgatggtcca gtcgaccacg
     3601 agcgagccgt cgcccacgac gacgaccctg ctcggacccg agtccacggt gcaccccgcg
     3661 agcgccgtga gcgcaacgca agcagccgcc agaagctgaa atttcatggg ttttccctcg
     3721 cagttacatg cgatagccac ggtgttcccc gcgtgctggc ggggccgtgc gcgccggggg
     3781 ggcgacgtag cggcgcgcgg gcggcgccgt gcgcacgggg gcggaatagt agtgagcagg
     3841 cggcgcactg cgcacctgtg cgcgctcgcg cacgaccgtc ggtcggctgt gaacgatcac
     3901 ggtgcgacgc tggtacagcg gcgccggctc gctgcggtaa tagacccagt gcggaccttc
     3961 gcgataatac cagcggtcat tgacgagata cacgacgtgg ccgtcgtagt attcgtgcgg
     4021 ataaacctcg acgttcgcga ccggcgccgc gtactcgacg tcagcgccgg tggttgcctc
     4081 cgcatagcag cccgtcagcg cgcaggccgc gatggcgagc gaacatcgaa acaaaacggc
     4141 tctcggtgac acgtcttaaa ggggtgcaat cgtcgtgccg cgacgtcggt gcctccggcg
     4201 cctatcgcgc gagcgctgcc gcacggctgc cgcagccggg cacgaacgcc acacgctttt
     4261 atctacacgg caacggtacg gtgactgagg cggataacgc cgtggtccgt gccttgcagc
     4321 atgcgcgttc gttcgaatcg ctcaggctcg aattgctcga cggaaaggaa aacgcgatga
     4381 tttgcagcga aatcatgaag tccgagatcg agtgtgtcgc gccgacagac acggccggag
     4441 acgccgcgcg caagatgcgg gaccacaacg tcggcttcct cccggtgtgt gacgacagcc
     4501 tgcaggtggt cggcaccctc accgatcgcg atctcgcgtt gcgcgtcgtg gccgaggggc
     4561 gtcccatgac gacccccgtc gcggagctca tgacacacga ggtcgtgtcg tgtcgttcca
     4621 cggacaattt gagccgggcg gaagagctga tgggtctctt tcgcgtctcg cgcatgctgt
     4681 gcgtcgacga ggacgggctg ctcgccggcg tcatcagtct ttcggacatc gcgcaacacg
     4741 agacactgag ccgcgtcgct cagacgttac gcgacgtaac gatgcgcgaa atcgcgccct
     4801 gaagcgctac cactgctcga gcggttcgcg gtcgcgctgg gcgaccacga cttctagcgc
     4861 gccttcggcg agatcctgga ggcgctgcgc gtactctggc aagtagccgc gctccgtcgt
     4921 cgaatgttcg gcgagcacga tgctcgcgcc gctgccgagc gtcgcgagca ccgcgtggtg
     4981 cgacagctcg ccggtgacat aagcgtcgaa gccaggcgcg cgttcgaaca cgccggcgcc
     5041 cgagccggcg caaacggcga cccttcgcac gaccgcgccg ccccgttgcg cctccgtggc
     5101 cgcaacccgc agcgacgcac gcccgaggtg cgtcttcagc ctccgaacca gcgtctcgag
     5161 cgggacgggc gtctcgagcg tcaccccgcg cccctgcccg aagccggccg ccggtcgcgc
     5221 cgcgagcggg taaacgtccc atgccggctc ttcgtacggg tgcacgtcac gcagcacgcg
     5281 cgcggcccga ccgagcgcgt gtttcgggca caccatttcg agccggattt cgtcgacgtg
     5341 ctcgagcttg ccgcgttgcc cgacggccgg atccgtcgct ggcccgccga gaaacgtccc
     5401 gaccgcaggc gtgcggctcg agcactctcg gtactcaccg atgactcccg ccccagcgcc
     5461 tgacagcgcg gacgcgaccg cgtccacctg ttcggcaggg acgaaggtca cgagcttgaa
     5521 cgccgccgcg gggtcgagcg tgttcgcctc gacgagcggc gtgatttcac ctggacccgc
     5581 gcccgctgcg agccagtcgt tcacgccgcc gggcgccgcg tcgagcgccg tgtgcggcga
     5641 gtagatggcc gtgccggcgc gcgcgaggcg ctgcaaagcg cgttcggcgc tgccgcgcgt
     5701 gccgagccgc ttgagcggtc gaaagacggg cggatgatac gcaacgacca gatcgacgtc
     5761 ctgagcgagc gcttcctcga gcacggcttc ggtgagatcg atcgtgacga gcgcgcgccg
     5821 aatgctcggc ggctcgcctt gagcacggcg gtcgccgagc ggctcgagca ggagcccgac
     5881 gttgtcccag tcctcggcat acgcgagcgg cgcgatacgc tcgagcagct ccacggtgcg
     5941 agcgagcgag aggcccataa gactagtgcc gcggctcgtc gggcgcctcg tcctcgagcg
     6001 gctccgacga ggcaaagggc ccgcttttac ggtggctcat gatggccttg agcgcctgca
     6061 tgaaggtgcc atcgacgcgc tgataatacg cacgcgagac ggtgacggcg cgttcggtgt
     6121 cggccgattc gagcgccgcg ttgaactcgc gcaggtattg gggaaagctc ggctcgagta
     6181 cccacagcgc cgggaagcga tcgatgatct cgcggtacgc ttcgagaaac gggttggcga
     6241 tccagcgcac ggccaccgag tggcccgcgt cgacgagcgc gtcgagccag cgctgaaagc
     6301 catgcccgat gagcgtggga tcggcgcgtt cgaaagccgc gatcacgagg tccgtgatgt
     6361 cgcgcaggcg tgcgatatcg tccttgtcgg cgcgctccgc cgcgagccga gtcgcgaact
     6421 cgagcacgag caggcgcgcg ggcaaaatgt cctcgagcag gtgcaggctt tcgccgagat
     6481 cggtcgccga ctcgaggaac ggcgcgagca gctcgagggt gc
//
LOCUS       DATIML010000366         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2961691, whole genome shotgun sequence.
ACCESSION   DATIML010000366 DATIML010000000
VERSION     DATIML010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2961691"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VLJ38_06300"
     CDS             <1..888
                     /locus_tag="VLJ38_06300"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HSU39155.1"
                     /translation="AAADEVIVEVKASALTNLARLFAAGKHHSALPPPVVAGVDGVGV
                     LDGKRVYFALPRPPFGSMAERTVVNVRQCVPVPDGVADVTAAAAGNPGMSSWSALTRR
                     AHFVRGESVLVNGAAGVSGRLAVQVAKHLGARRVVATARNPAVEPELRALGADGFIEL
                     TLSHAELTQAFRRELGAHGVDVILDYLYGGPAEALLHACVGPGRGAAEPRIRYVQIGA
                     SAGATIPLPAAALRSSGLELSGAGLGALSHVELVTCIGEFFHSYVAGGFRVAATTKSL
                     SEVETAWAHTGRERLVLTV"
     gene            complement(890..>1671)
                     /locus_tag="VLJ38_06305"
     CDS             complement(890..>1671)
                     /locus_tag="VLJ38_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39156.1"
                     /translation="HYGLISFGASNRLFLAVLALTWFAAVLAWTAWWRASPPTLARQL
                     LTAVVVVYSYYWTMEGFYDIAAVALTSLGFEAARRRNHALASFSGGLSVLVHPRLFML
                     APPIAWEFLPATRAFRKLSARHRALLVGGVLLFVAALGFAYMIQTTVSLHAAKQPPNP
                     VCPGRGPWLPVLAYAAVILGLAGLLWREGSRLDAATVLFAGLAFGTQRYLAPWYWLPV
                     LPWAMAPAPSKGGSLAMSKTAAAARLVVVVMFFVASNAQRW"
BASE COUNT          283 a          574 c          602 g          212 t
ORIGIN      
        1 gccgccgcgg acgaagtgat cgtcgaggtg aaggcctcgg cgctcacgaa tcttgcgcgg
       61 ctgttcgcag cgggcaagca ccacagcgcg ctgccgccac ccgtcgtcgc gggggtggac
      121 ggcgtcggcg ttctcgacgg caagcgcgtg tacttcgcgc tgccgcggcc gccgttcggg
      181 agcatggcgg agcgaacggt cgtgaacgtg cggcagtgcg tgcccgtgcc ggacggcgtc
      241 gcggacgtga cggccgcggc tgccggcaat ccgggcatgt cgtcgtggtc ggcgctgacg
      301 cggcgcgcgc atttcgtgcg gggcgaaagc gtgctcgtca acggtgccgc tggtgtctcg
      361 gggcggctcg ccgtgcaagt cgccaagcac ctcggcgcgc ggcgcgtggt cgccacggcg
      421 cgaaacccag cggtcgagcc cgaattacgg gcgctcggtg ccgacggctt catcgagctc
      481 acgctgtcgc acgccgagct cacccaagcc ttccgtcgcg agctcggcgc gcacggcgtc
      541 gacgtcattc tcgactacct ctacggcggc ccggccgaag cgctgctgca cgcttgcgtg
      601 ggaccgggac gcggcgccgc cgagccgcgc atccgttacg tgcaaatcgg tgcgtcggcc
      661 ggcgcgacga ttccgctgcc cgccgcggcg ctccgaagct cgggtctcga gctcagcgga
      721 gcgggactcg gcgcgctgtc gcacgtcgag ctcgtcacct gcatcggcga atttttccat
      781 agctacgtcg cgggcggctt ccgcgtcgcc gcgacgacca agtcgctgtc cgaggtcgag
      841 acggcgtggg cgcacacggg gcgcgagcgg ctcgtgctca cggtgtgagc taccagcgct
      901 gggcgttact cgcgacgaag aacatcacca ccacgaccaa acgcgccgcg gcagccgtct
      961 tcgacatggc gagtgacccg cctttggacg gcgcgggcgc catggcccaa ggcagcacgg
     1021 gcagccaata ccaaggcgca agataccgct gcgtgccgaa agcgagcccg gcgaacagca
     1081 ccgtcgcggc atccaggcgc gagccttcac gccagagcag ccccgctaac ccgagaatga
     1141 ccgccgcgta ggccaggacc ggcagccacg gcccacgccc tggacacacc gggttcggcg
     1201 gttgcttagc ggcgtgcagc gagaccgtgg tttgaatcat gtaggcaaaa ccgagcgccg
     1261 cgacgaagag cagcacaccg ccgacgagga gcgcgcggtg gcgagccgaa agctttcgaa
     1321 aggcgcgcgt tgccggcaag aactcccacg cgatgggcgg cgcgagcatg aagagccgcg
     1381 gatgcaccag cacggagagc ccgcccgaaa aagaggcgag cgcgtggttt cgccggcgcg
     1441 cggcctcgaa gccgagcgac gtgagcgcga cggcggcgat gtcgtaaaag ccctccatcg
     1501 tccagtagta cgagtagacg acgaccacgg ccgtcaggag ctggcgcgcg agcgtcggcg
     1561 gcgacgcgcg ccaccaggcc gtccacgcga gcacggcggc aaaccacgtg agcgcgagca
     1621 ccgcgaggaa cagccgattc gacgcgccga acgagatcag cccgtagtgg t
//
LOCUS       DATIML010000367         2595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1518205, whole genome shotgun sequence.
ACCESSION   DATIML010000367 DATIML010000000
VERSION     DATIML010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518205"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1351)
                     /locus_tag="VLJ38_06310"
     CDS             complement(<1..1351)
                     /locus_tag="VLJ38_06310"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiheme c-type cytochrome"
                     /protein_id="HSU39157.1"
                     /translation="MRRRLSHLNLLGLGLCLLALGGGCRCSRTPAKSSAERPTPSLRL
                     YLVSGTAGALEPCGCVKDMLGGVDHFAALLERDRAPSELVLGAGPMLFRDPKLDGKEK
                     DQDLIKARALADVFARLKVAGWAPGANDWAGGSELLADVTKDRLTLFAANIKGGGFSS
                     GRVFELDGQRVGVVGVSTAKPEGANANVEVGDARAALVAGANWLGAQGARIRVALLAA
                     PRGDALRLLDAVPGFHVALVGKPLDRGEMNDLATPPVRVGETLVVEAQNHLQSVAVVD
                     LFVRDGKYAFADATGIEAEEKRISLTARATDLKVALARSGVGAQDRAARERDLEAVNA
                     ELAELARPRDLPPGSAFRYELVEIREALGSDPTSKSLLASYYKTVNEHNREAFKDVLP
                     PPVPPGQSGYVGVEACSTCHDSEREFWNRTPHHAAYKTLADQNKQFNLDCVGCHVTGY
                     "
     gene            1453..>2595
                     /locus_tag="VLJ38_06315"
     CDS             1453..>2595
                     /locus_tag="VLJ38_06315"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39158.1"
                     /translation="MAVDRQEPRLKGPTAFGPFVLERRLAVGGTAEVFLAHPKVGIAP
                     APHLVVKRLLPTTGEGTRYELLEREADLHRCVRHPNVVAVYGAGIVRGEPYLAMEYVE
                     GLDLYRMLRRLDADDRDLPVEICVLIARQVAAALEAVHAATDDNGRALKIVHRDVTPS
                     NVYLSVKGDVKLGDFGIARVEEEARSTVGGLKGKFGYLAPEQVSGEEFDHRADLFALV
                     AILGELLIGERVFPGGGQLAVLLAIRDGNIDPLRREAGRLPKGLFELCEKGLHCDPDK
                     RFQSATELAVALAQFQATRTENVVQELSEWVKWAQDQRELARKLEHKIRSSSQNLQAV
                     RAQSSVPELKITTRLVTRPTPPPVEVPPRVKRLGSKTVEEMNFAHLV"
BASE COUNT          411 a          832 c          917 g          435 t
ORIGIN      
        1 cgtagccggt gacgtggcag ccgacgcagt cgaggttgaa ctgcttattt tggtcggcga
       61 gcgtcttgta cgcggcgtga tgcggcgtgc ggttccagaa ttcgcgctcg gagtcgtgac
      121 acgtgctgca ggcttcgacg ccgacatagc cgctctgtcc cggcggtacc ggtggaggca
      181 acacgtcctt gaacgcctca cgattgtgct cgttgacggt cttgtaatag ctcgcgagca
      241 gcgacttgct cgtgggatcg gagccgagcg cttcgcggat ttcgacgagc tcgtagcgga
      301 acgcgctgcc cggcgggaga tcgcgcggcc gggcgagctc ggcgagctcg gcgttgacgg
      361 cttcgagatc acgctcgcgc gccgcgcgat cttgcgcgcc gacgccgctg cgagcgagcg
      421 cgactttgag atccgtggcg cgcgccgtga ggctgatgcg tttctcttcc gcctcgatgc
      481 cggtcgcgtc cgcgaatgcg tatttgccgt cgcgcacgaa cagatcgacc acggcgacgg
      541 actgcaggtg attctgcgct tcgacgacga gcgtctcgcc gacgcgcacg ggcggcgtgg
      601 caaggtcgtt catttcgccg cgatcgagcg gcttgccgac gagcgcgacg tggaagccgg
      661 gcacggcgtc gagcaggcgc agcgcgtcgc cgcgcggtgc cgccaagagc gcgacgcgaa
      721 tgcgcgcgcc ctgtgcgccg agccagttcg cgcccgcgac gagcgccgcg cgcgcatcgc
      781 cgacctccac gttcgcgttc gcaccttccg gcttcgccgt gctcaccccg acgacaccga
      841 cgcgctgccc gtcgagctcg aagacgcgtc cgctcgagaa tccgccgccc ttgatgttcg
      901 cggcgaaaag cgtgaggcga tctttcgtga catcggcgag cagctcggag ccgcccgccc
      961 agtcgttcgc gcccggcgcc cagcccgcga ctttgaggcg cgcgaacacg tcggcgagcg
     1021 cgcgcgcttt gatcaagtct tggtccttct ccttgccgtc gagcttcgga tcgcggaaca
     1081 gcatcggccc ggcgccgagc acgagctcgc tcggcgcgcg gtcgcgttcg agcagcgcgg
     1141 cgaaatgatc gacgccgccg agcatgtcct tcacgcaccc acatggttcg agcgcgcccg
     1201 ccgtgcccga gaccaaatag agccgcagcg aaggcgtagg tcgctcggcc gagctctttg
     1261 ccggagtgcg agagcaccgg cagccgccgc ccagcgcgag caaacacaaa cccaacccga
     1321 gtaggttcag gtgggagagt cgtcgcctca tcgtgcggac gaatagcacg gccgtccgtg
     1381 atcgacgcgt cttcgacggg acaaaatccg ttctgattgt gcgggcgcgt ctggtcggct
     1441 cataatcggc acgtggcagt cgaccggcag gagccgaggc tcaaggggcc gacggcattc
     1501 gggcctttcg tgctcgagcg gcggctggcc gtgggaggca ccgccgaggt atttctcgcg
     1561 catccgaagg tcggcatcgc gccggcgccg cacttggtcg tgaagcgctt gctgccgacg
     1621 acgggtgaag gcacgcgcta cgagctgctc gagcgcgaag cggatttgca tcgctgcgtg
     1681 cggcacccga acgtggtcgc ggtttacggc gccggcatcg tgcgcggcga gccgtacctc
     1741 gcgatggagt acgtcgaggg gctcgatctt tatcgcatgc tgcggcgact cgacgcggat
     1801 gaccgtgatt tgccggtcga aatttgcgtg ctcatcgcgc ggcaggtggc ggcggcactc
     1861 gaagccgtgc acgcggccac cgacgacaac gggcgcgcgc tcaagatcgt gcaccgcgac
     1921 gtgacgccgt cgaacgtgta cttgtcggtg aagggtgacg tgaagctcgg cgacttcggg
     1981 atcgcgcgcg tcgaagagga agcgcgttcg acggtcggcg gcctcaaggg caagttcggc
     2041 tacctggcgc cggaacaggt ctcgggcgag gagttcgatc atcgcgccga cttgttcgcg
     2101 ctcgtggcga ttttgggcga gctcttgatt ggcgagcgcg tgtttccggg cggcgggcaa
     2161 ctcgcagtct tgctcgcgat ccgcgacggc aacatcgatc cgttgcggcg cgaggccggg
     2221 cggctgccga aagggttatt cgagctgtgc gagaaggggc tccactgcga tcccgacaag
     2281 cgtttccaat cggcgacgga gctcgcggtg gcgctcgcgc agtttcaggc gacgcgcacc
     2341 gagaacgtcg tgcaggagct ctcggagtgg gtgaaatggg cgcaggatca gcgtgagctc
     2401 gcgcgcaagc tcgagcacaa gatccgctcg tcgtcgcaaa atctgcaggc cgtgcgcgcg
     2461 cagagctcgg tgcccgaact caagatcacc acgcgcttgg tgacgcgacc gacgccgccg
     2521 ccggtggaag tgcctccgcg cgtcaagcgc ctgggttcga agacggtgga agaaatgaac
     2581 tttgcgcacc tggtc
//
LOCUS       DATIML010000368         5208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3539594, whole genome shotgun sequence.
ACCESSION   DATIML010000368 DATIML010000000
VERSION     DATIML010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5208
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3539594"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VLJ38_06320"
     CDS             complement(<1..829)
                     /locus_tag="VLJ38_06320"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/ABC1/UbiB kinase family protein"
                     /protein_id="HSU39159.1"
                     /translation="MSSDGSLPTGRLGRVVRLAGVGARAGAGLLLSKGDGAAEYAADV
                     LGTLRGLAAKVGQTLSYVDGIVPEAQRETYERALGKLRDATVRSAPEAVRRVVEEELG
                     APVEQLFRSFDEQPFASASIGQVHRALLLDGRAVAVKVQHPGIASAIESDLQNAGVIE
                     GLVTTLGPKGMNAKAAYDEVAARFREELDYELEAKRQSQFSELHAGDPTIRIPAVIRE
                     RSRRRVLTTELVEGLPFDAATAGTEGERRAWAETLWRFVFKGNLVGAMFNADPHPGNY
                     "
     gene            complement(902..1834)
                     /locus_tag="VLJ38_06325"
     CDS             complement(902..1834)
                     /locus_tag="VLJ38_06325"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HSU39160.1"
                     /translation="MSFLNISFDPPVRGAKATKLSEYQWLGAAPFMAVHLLPLLAFWT
                     GARWQDWACCVALYWVRMFGVTGVYHRYFSHRTYKTSRVFQFLLAFLAMTSSQKGVLW
                     WASNHRTHHKLSDKDGDPHDSRRGFWYSHFGWLYDHTEATDYSKVKDLARYPELVFLN
                     EYWVIPPVVLGVSVFLLLGWSGLLIGFFLSTAILWHGTFTINSLSHMLGKQRYDAGDD
                     SRNNWVLAIVTMGEGWHNNHHHFMGSTRQGFYWWEVDMSYYILRTFQAMGLVWDIKEP
                     PARVYDPARQLPRTRPVTAIAPVSVAAIDLTPGE"
     gene            complement(1949..2161)
                     /locus_tag="VLJ38_06330"
     CDS             complement(1949..2161)
                     /locus_tag="VLJ38_06330"
                     /inference="COORDINATES: protein motif:HMM:NF022596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HSU39161.1"
                     /translation="MGQVGRGFLVFGALLLLVGGALIVAEKLGLGRLPGDLVVERKGF
                     RLYAPLATSILVSLVLTLLANLFLRR"
     gene            complement(2341..3207)
                     /locus_tag="VLJ38_06335"
     CDS             complement(2341..3207)
                     /locus_tag="VLJ38_06335"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSU39162.1"
                     /translation="MLALRHLRIGFWGLLLFLSLGLGLEALHGFKVAFYLDVDSEPRR
                     LAWRLGHAHGTLLSLVHVVFGLTLGSQYAPDARTAARASLLLDAATLLLPGGFLLGGL
                     FVHGGDPGLGVLLVPFGAIALFGAVLLTARGLASSAAARHSEPDLVLRELAFGTPAYD
                     ASVVLRTRVLRAPLRVQPAPEERDEDQSLLHLGAFEGERLVACLMLQELGDGAVKMRQ
                     VAVDFDRQHHGLGTRLVHYAESVARERGLREMRLHARHTAVAFYERLGYQAHGEPFVE
                     ITVPHLAMKKRL"
     gene            complement(3308..4606)
                     /locus_tag="VLJ38_06340"
     CDS             complement(3308..4606)
                     /locus_tag="VLJ38_06340"
                     /inference="COORDINATES: protein motif:HMM:TIGR03118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03118 family protein"
                     /protein_id="HSU39163.1"
                     /translation="MIPSVLSFAVASGCNGDDDSNTGAGGSSAKGGSAGKAASAGRGG
                     TSGAATGGRGGSAGTSARAGRGGTGATGGTSNDNGGAGQAGTGTAGAGAGGENAGGAG
                     AGGEGGQVATELPVVQTNLTTDATGASVVDPSLVNAWGLAINPASSGASFWVSAAGTG
                     LATVYDASGAVQSTIVTIPPASGTGLGSPTGQVYNPSTDFSGDVFIFATEDGLIEGWQ
                     SGSLAVMRADRSAAGASYKGLALVTSGASHTLAAANFHEGTVDVFDAAYARVTTSGLF
                     VDPEQPTGYAPFNVAQLGNSVYVAYAKQDADKADEVAGAGNGYVNEFGVDGSFTRRLV
                     SRGDLDAPWGLALAPASYGALANTLLVGNFGDGEIHGYRLADGSEAGTLVNAAGDPVV
                     IDGLWALAFGPNTTAADLRSTLFFTAGPSDETHGLFGKIT"
     gene            complement(4979..>5208)
                     /locus_tag="VLJ38_06345"
     CDS             complement(4979..>5208)
                     /locus_tag="VLJ38_06345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39164.1"
                     /translation="ACDALRATPEFSEIACDFTAAPAERHAAREAAIARFVRIYGERA
                     THVASDDPLSLDARLAALRHARDERPTTISE"
BASE COUNT          877 a         1720 c         1779 g          832 t
ORIGIN      
        1 ggtagttgcc cgggtgcggg tcggcgttga acatcgcgcc cacgaggttg cccttgaaca
       61 cgaagcgcca gagcgtttcc gcccacgcgc ggcgttcgcc ctccgtgccc gccgtcgccg
      121 catcgaacgg caggccttcc acgagctcgg tcgtgagcac gcgccgccgc gaacgctcgc
      181 gaatcacggc cgggatccgg atcgtcggat cgcccgcgtg cagctcggaa aactgacttt
      241 ggcgtttggc ttcgagctcg tagtcgagct cttcgcggaa acgtgcggca acctcgtcgt
      301 aggccgcctt tgcgttcatg cctttcggcc cgagtgtcgt gacgagccct tcgatcacgc
      361 ccgcgttctg cagatcgctc tcgatcgcgc tcgcgatgcc cgggtgttgc accttcacgg
      421 ccaccgcgcg tccatcgagc aggagcgcgc ggtggacttg tccaatcgag gcgcttgcga
      481 acggctgctc gtcgaagctc cgaaacagct gctcgacggg cgcgccgagc tcctcttcga
      541 cgacgcgccg cacggcttca ggcgcggagc gcacggtcgc gtcccgaagc ttgccgagcg
      601 cgcgctcgta cgtttcgcgc tgcgcctcgg gcacgatgcc gtccacgtag ctcagcgttt
      661 ggcccacctt ggcggcgagc ccgcgcaacg tcccgagcac gtccgcggcg tactcggccg
      721 caccgtcgcc cttcgacaag agcaggcctg cccctgctcg tgcccccacg ccggcgagcc
      781 gcaccacgcg gccgagccgt ccggtcggaa gcgaaccgtc gctggacatc tcctcgcgag
      841 cctacagcga ggatctcgag gcaccaagtg ccggcgtcgt tacgccggcg gttctgccga
      901 gttactcgcc cggggtcaga tcgatcgccg cgaccgaaac gggcgcgatt gccgtaacgg
      961 gccgagttcg cggcagttga cgcgctgggt cgtagacgcg cgccggcggc tctttgatgt
     1021 cccacacgag ccccatcgcc tggaaagtac gcaggatgta gtagctcatg tcgacttccc
     1081 accagtaaaa gccctggcgc gtcgagccca tgaagtgatg gtggttgttg tgccagcctt
     1141 cacccatcgt gacgatggcg aggacccagt tgttccggct gtcgtcgccc gcgtcgtagc
     1201 gttgcttgcc gagcatgtgc gacagcgagt tgatggtgaa ggtgccgtgc cagaggatcg
     1261 ccgtgctcag gaaaaatccg atgagcagcc ccgaccagcc gaggagcaag aacacgctga
     1321 cgccgagcac gaccggcgga atcacccagt actcgttcaa gaacacgagc tccgggtaac
     1381 gggcgaggtc tttcaccttg ctgtagtcgg tcgcttccgt gtgatcgtag agccagccga
     1441 agtgcgagta ccagaagccg cgccgcgagt cgtgcgggtc gccgtccttg tccgagagct
     1501 tgtggtgcgt gcggtggttc gacgcccacc agagcacgcc tttctgcgag ctcgtcatcg
     1561 cgaggaaggc gagcagaaac tggaacacgc ggctcgtctt gtaggtccga tgcgagaagt
     1621 agcggtgata gacgcccgtc acgccgaaca tccgcaccca gtagagcgcc acgcaacacg
     1681 cccaatcctg ccagcgcgcg cccgtccaaa acgccaggag cggcagcagg tgcaccgcca
     1741 tgaacggcgc cgccccgagc cattgatact cggacagctt ggtggctttc gctccacgga
     1801 ccggcggatc aaaggaaatg ttgagaaaac tcaccccaga accatggcat cgccgccaca
     1861 ctcagcgtgg tcattcttct gtcaggacgc cggagctctg tcaggacaac gtcagcgaga
     1921 cgaagccggc agaggcgccg cgctcgagct aacggcggag aaacaaattt gcgagcagcg
     1981 tgaggacgag gctcacgagg atcgaggtcg ctagcggcgc gtagagccga aagcccttcc
     2041 gctcgacgac gaggtcgccg ggcaggcggc cgagcccgag cttttcagcg acgatgagtg
     2101 ctcctccaac cagcaggagc agtgctccga agacgagaaa gccgcggccg acctgaccca
     2161 tgcttcgaat gtgccgcccc cgtacggtgc tgcaagtctc actccgggaa tagtcgggcc
     2221 gtcgttgagc ggagtgcttg aggccggctc gggctttcgg ccggccggaa tgcctgctct
     2281 cagcgaagtg tggctttgct ggaatggacg ccccggagct ggggaccgag tggtggcggc
     2341 tcagagccgc ttcttcatcg cgaggtgcgg caccgtaatc tccacgaacg gctcgccgtg
     2401 cgcctggtag ccgagccgct cgtaaaacgc gacggccgtg tgacgcgcgt ggagccgcat
     2461 ttcgcgaagg ccacgctcgc gcgcgacgga ctccgcgtaa tgcactagcc gcgtgccgag
     2521 gccgtggtgc tggcgatcga agtcgacggc gacctgacgc atctttacgg caccgtcacc
     2581 gagctcttgc agcatgagac acgcgacgag gcgctcgccc tcgaaagcgc cgaggtgtag
     2641 gaggctttga tcttcgtcgc gttcttccgg cgccggctgc acgcgcagtg gggcgcgtag
     2701 cacgcgcgtc cgcaagacga cgctcgcatc gtaggccggg gtgccgaacg cgagctctcg
     2761 cagcacgagg tcgggctcgg aatgtcgcgc agcagcgctc gaggcgagac cccgagccgt
     2821 gagcagcacg gctccgaaga gcgcgatggc gccgaacggc acgagcagca caccgagccc
     2881 cggatcgccg ccgtgcacga agagaccgcc gagcaaaaag ccgcccggca agagcagtgt
     2941 ggcggcgtcg agcagcaggg aggcgcgcgc cgccgtgcgc gcgtccggcg cgtactgcga
     3001 accgagcgtc agtccgaaca cgacatgaac gagcgagagc agcgtgccgt gtgcgtggcc
     3061 gagccgccag gcgagccggc gcggttcgct atcgacgtcg aggtagaagg ccaccttgaa
     3121 gccgtggagc gcttccagtc cgagcccgag cgacaggaac aagagcagcc cccaaaagcc
     3181 gatgcgcagg tgacggaggg cgagcatcgg tcgtctgcag accagacgac cgatgcatat
     3241 cacggccgcg cgaaacgctc atccgcggcg cttccttggc gcgccgcggg cgagaggggg
     3301 ctcaaggcta ggtgatcttg ccgaagagac cgtgcgtttc gtcgctcggg ccggccgtga
     3361 agaacagcgt gctcctgaga tcggcggccg tggtgttcgg gccgaaggcg agcgcccaca
     3421 ggccatcgat cacgacggga tcgcccgctg cgttgacgag agtgcccgct tccgagccgt
     3481 cggccaagcg atagccgtgg atctcgccgt cgccgaagtt accgacgagc agcgtgttcg
     3541 cgagcgcacc gtaagaggcc ggcgcgagcg cgaggcccca gggtgcgtcg aggtcgccgc
     3601 gcgagacgag gcgcctcgtg aacgagccgt ccacgccgaa ttcgttcacg tagccgttac
     3661 cggcgccggc cacctcgtcg gccttgtcgg cgtcttgctt ggcgtacgcg acgtagacgg
     3721 agttgccgag ctgggcgacg ttgaagggcg cgtagccggt cggctgctcg ggatcgacga
     3781 agaggccgga ggtcgtcacg cgcgcgtacg cggcatcgaa cacgtcaacc gtgccttcgt
     3841 ggaagttggc tgcggcgagc gtgtggctgg cgccgctcgt gactagcgcg agtcccttgt
     3901 agctcgcgcc ggccgcggaa cgatccgcgc gcatcacggc gagcgagccc gactgccaac
     3961 cttcgatgag tccgtcttcg gtcgcgaaga tgaagacgtc gcccgaaaag tcagtcgacg
     4021 gattgtagac ttgtcccgtc ggtgagccca agcccgtgcc gctcgcgggt gggatggtga
     4081 cgatcgtcga ttggacggcg ccgctagcgt cgtacaccgt ggcaagcccc gttcccgccg
     4141 cggacaccca aaagctcgcg ccgctcgaag cggggttgat ggcaagcccc catgcgttga
     4201 cgaggctcgg gtcgacgacg gatgcgcccg tcgcgtcggt cgtgagattg gtttgcacga
     4261 ccggcagctc ggtcgctacc tgaccgccct caccgccagc gcccgcgccg ccggcgtttt
     4321 cgccgcctgc gcctgcgccc gctgtgccgg tgccggcctg tccggctccg ccgttgtcgt
     4381 tgctggtgcc accggtggcg cccgtgccgc cgcggccggc tcgtgcgctc gtgcccgcgc
     4441 tgccgccgcg accgcccgtg gctgcgcccg acgtgccacc gcggccggcg ctggcagcct
     4501 tgccggccga gccgcctttg gccgagctgc cgcccgcgcc ggtgttcgag tcgtcgtcac
     4561 cgttgcaacc ggacgcgaca gcgaacgaaa ggacggacgg aatcatgagc gccgtcaagc
     4621 tgcgatgtga gaaaagtcta gtttgcatgt tgaaggtcct cctgcggact gaaggaaaat
     4681 gtgtggcgcg cggcgctact aggcgcaagg tggccgaaac aatcctattt catagtgaca
     4741 gtctgcagcg gcgcgggacg tagtgacacg gacagtcgag tcgatcaccg tggcagtctg
     4801 tcggcaggtt gaggcgactc gcctctgacg cgtggcggcg tgttgcgaac ggcgacatgc
     4861 gcgagtcttt tgcgctcgcc tctacgactg tgtcattcgt ggccggcgcg gttcgtcccc
     4921 gaagcagagc gcatgctagc gcattctcgg cccgctcacg tgcggctttg cgcggcagtt
     4981 actcggagat cgtcgtgggt cgctcgtccc gtgcgtggcg gagcgcggcc aagcgagcat
     5041 cgagtgacag cgggtcatca ctcgccacgt gggttgcacg ttcaccgtaa attcgtacga
     5101 aacgtgcgat cgctgcctcc cgcgccgcgt ggcgctcggc gggcgccgcc gtgaaatcgc
     5161 aggcgatctc cgaaaattcc ggggtcgcgc gcagcgcatc gcaggcga
//
LOCUS       DATIML010000369         1681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4404758, whole genome shotgun sequence.
ACCESSION   DATIML010000369 DATIML010000000
VERSION     DATIML010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4404758"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..580)
                     /locus_tag="VLJ38_06350"
     CDS             complement(95..580)
                     /locus_tag="VLJ38_06350"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit B"
                     /protein_id="HSU39165.1"
                     /translation="MSVAPLELHPPLLALAGGVSLDFDNTLVFQILIFVLLMFLLEPL
                     LFRPVLRVFALREERTVGAKAQARELDERAGAIYQRYQRELERVNRVAAEERDRIRAE
                     TAKVEAEILREARAATGRVVEDGRKQIAAEISRIRFDLGRESQRLSQDIVTRVLGREA
                     N"
     gene            complement(633..1124)
                     /gene="folK"
                     /locus_tag="VLJ38_06355"
     CDS             complement(633..1124)
                     /gene="folK"
                     /locus_tag="VLJ38_06355"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HSU39166.1"
                     /translation="MDAVIGLGSNLGDRRALLRRAVEELREFGDVGPISALYETQPVG
                     PPQPLFLNAAVALKTALDPLSLLDALLAIELRLGRVRQDRWGPRRIDLDILWTDAGIF
                     EAPRLCVPHPELRRRAFALRPLLDVAPEATDPCDGTPYRAVLAALGDDSPVEIAGSRF
                     GWT"
     gene            1465..>1681
                     /locus_tag="VLJ38_06360"
     CDS             1465..>1681
                     /locus_tag="VLJ38_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39167.1"
                     /translation="MSDASAEAERLSAALRSRGYWVVDVPLGLLAGRVAVQRPSLVVL
                     DADTPGTSEAVQRMQGASGDKPIDIVLI"
BASE COUNT          297 a          550 c          585 g          249 t
ORIGIN      
        1 tgctcggcct gtgctgcttc cggctccgcc gaggcggctg ccgggacggc ggtgagcaaa
       61 gcgacagcgc aaagactcgc gaagaagcga cgcatcagtt ggcctcccgg ccgagtaccc
      121 gagtgacgat gtcttgcgag agtcgctgcg attcccgccc gaggtcgaaa cgtatccgcg
      181 aaatttccgc ggcgatctgc ttgcggccgt cttcgaccac gcggcccgtc gccgcgcgcg
      241 cctcgcgcag aatctcggct tccaccttgg cggtttcggc gcggatgcga tcacgctctt
      301 cggcggcgac gcggttcaca cgctcgagct cgcgctggta gcgctggtaa atcgcaccgg
      361 cgcgctcgtc gagctcacgg gcctgcgcct tggcgccgac cgtccgttct tcccgcagcg
      421 cgaagacgcg cagcacgggc cgaaacaaga gcggctcgag caggaacatg agcaggacga
      481 aaatgaggat ctggaagacg agcgtattgt cgaaatccag gctcacgccg cctgcgaggg
      541 cgaggagggg cgggtgtagt tctaggggcg caacgctcat ggcgtgaccg tttgcggcgc
      601 ggctcgtacc atctcgagcg cggcctgtcc attcatgtcc aaccgaagcg cgagccggcg
      661 atttccacgg gcgaatcgtc gccgagcgcc gcgaggacgg cacggtacgg cgtaccgtcg
      721 cacggatcgg tcgcctcggg ggcgacgtcg agcagcgggc gcaaagcaaa ggcgcgccgc
      781 cggagctcgg gatggggcac gcagagcctc ggagcctcga aaatcccagc gtccgtccaa
      841 agaatgtcga gatcgatgcg gcgaggcccc caccgatctt ggcggacgcg accgagccgg
      901 agctcgatcg cgaggagcgc gtcgagcagg ctgagcgggt ccaaggcggt tttcagcgcc
      961 acggcagcgt tgagaaacag cggctgcggt gggccgaccg gctgagtttc gtagagagcg
     1021 gaaattggac ctacatcgcc gaactcgcgc agctcctcga cagcacgcct gagcaaagcg
     1081 cgccggtcgc ccaaattcga accgaggccg atgactgcgt ccaagcaggc gcagcctaga
     1141 ccggtctgag caagctgtca gacgctggcc ctgaggaccg actcgcggca atgtctcgcg
     1201 gtgttcggca tgacccaggg cgagctcggc ctcgtcgcct tcatcgtggc tgcgatcctc
     1261 agcgcgcgtt attggccgcg catgggcgag tgggtcgcca agcggctcga acgacactga
     1321 cgacggcacc cacggcggaa tcgagcccag ccgtagagaa acgccggacg acggggtacg
     1381 ctcctgagta ccgaggtggt aagccccgac cccaagtcta gccccgacgg cacgggcggc
     1441 tcgcagggcg gagctctcat tttcgtgagc gacgcctccg ccgaagcgga gcgtttgagc
     1501 gccgcgttac gctcgcgcgg ctactgggtc gtcgatgtgc cgctcgggct gctcgcaggg
     1561 cgcgtcgccg tccagcggcc gtcactcgtc gtgctcgacg ccgacacacc gggcacgtcc
     1621 gaggccgtgc aacggatgca aggggcgagc ggcgacaagc ccatcgatat cgtgctcatc
     1681 g
//
LOCUS       DATIML010000370         4192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4404788, whole genome shotgun sequence.
ACCESSION   DATIML010000370 DATIML010000000
VERSION     DATIML010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4404788"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            223..1452
                     /locus_tag="VLJ38_06365"
     CDS             223..1452
                     /locus_tag="VLJ38_06365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39168.1"
                     /translation="MQRDPALPNSEARVSRGGPRLAQRLRAFALALGFAACAGPSFTN
                     ETSGGSGAASGRSGAGGDAGKGATGGTGLGAAAGGSGLGAGGSSGDGAASGGDTSAGG
                     SAAGEVGAGGASDTCQCGPSQYCRAGTCFDCSDVSKLDFGGAEEVLDYPDGALRFPRA
                     GGADGSLFFTLVTTSVSELWYAPAVVSSPGGVLDDGRVPRAALDYFGDPGGLGFDVLF
                     DETASGGARAIRAATFDGHALGAAFDAPPPFAPSGADDYSSTLARETKRVYFMTTLSG
                     APELVTGVLDDAATKTVDLKVPARGGGTCSRRGADATPWVTADGRLLLFSAPLVDTAC
                     NTVDGDATDVFVALLNPTTGLPLATAVPIAGINHSADTSSETDASFTADLCAVYFASD
                     GGEAQGHDFRLYRALRR"
     gene            1508..2494
                     /locus_tag="VLJ38_06370"
     CDS             1508..2494
                     /locus_tag="VLJ38_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSU39169.1"
                     /translation="MPPAMQYTQLGRSGLKVSRFCLGTMNFGPETSEADSFAIMDRAL
                     ELGINFFDTANVYGWKKGEGVTEQIVGRWLAQGGGRRDKIVLATKVYGEMGALPNQGR
                     LSAYHIRRACDESLRRLRTDVIDLYQMHHVDRATPWEEIWQAFEVLIQQGKVIYAGSS
                     NFAGWHIAQASELARARGLYGLISEQCKYNLLTRLVETEIQPACERYGIGLMPYSPIG
                     GGLLAGAGRRGGAERLRRESDFAKREREKHASALERYVALCADIGQEPADVALAWVLS
                     RPQVAAPIVGPRTMEQLESSLGALEIRLEPDTLEKLDAIFPGYRPSPEAFAW"
     gene            complement(2683..3366)
                     /locus_tag="VLJ38_06375"
     CDS             complement(2683..3366)
                     /locus_tag="VLJ38_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39170.1"
                     /translation="MRNPVLAALLCVCSCHASVQGNAGASANGQGDAELEAEVQKERA
                     VATPSAVASAAAPAPAPEHALLGARSDLTLTAAQGPTQCSCLRVVLGPATLGAFSWKG
                     PPPAVDDERQLVMALTSEGTGCTNPKGSLGASYWGYRRRGNDVVVYVENGVAGRPLAQ
                     GAIIPKPLGSGQVYVAPVTKKLPFGKSPDSKGNCRIGNPGPARVAPVGLDETGAAEAP
                     SGDDELLGR"
     gene            3483..>4192
                     /locus_tag="VLJ38_06380"
     CDS             3483..>4192
                     /locus_tag="VLJ38_06380"
                     /inference="COORDINATES: protein motif:HMM:NF012236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscN/YscN/HrcN family type III secretion system
                     ATPase"
                     /protein_id="HSU39171.1"
                     /translation="MDLEALRAELAATPSLRPVGRVVAATGVLLRVVLPGARVGDLVR
                     VRRPSGDLTAEIVGFDAEHALALPLGELTGVGPDDAVEATGGRFDIGVGPELIGRVLD
                     GLGRPLDGLPAPVTSERAPVDRDPPPALARRPVREAFATGVRALDGLLTLGIGQRVGL
                     FAGSGVGKSTLLGAIARGSSADVVVVALVGERGREVSEFLQESLGAEGQKRAVVVVAT
                     SDAEPIERLRAAQVATTVA"
BASE COUNT          619 a         1409 c         1481 g          683 t
ORIGIN      
        1 cgccgccggc gtgtacggaa agtagcgctc gaaatcggcc tcgctgacct ctcccgtgct
       61 catgctcgtg ttcctgccga gaccgccaag ttcgggcaag cgggcgtgtt cgttcggtgc
      121 gacaaggcgt tcgggggtgc cgtaaagcgc tcgcatcctc gtggcaggac ggcatgtctg
      181 tcaaccgttg cgcggtggac ggctttctcg gagacttcac gcatgcagcg tgacccggcc
      241 ttgccgaaca gcgaggcgcg cgtgtcacgc ggagggccac gcctcgcgca gcggcttcgt
      301 gcctttgcgc tggcacttgg cttcgccgcg tgcgcgggcc cgagtttcac gaacgagacg
      361 agcggcggta gcggcgccgc cagtggtcgg agcggcgcag ggggtgacgc cggaaagggg
      421 gcaaccggcg gcacggggct cggcgctgct gccggaggtt cgggattggg cgcgggcggc
      481 agctccggcg acggcgccgc gagcggcggc gacacgtccg cgggcggcag cgcggcgggt
      541 gaagtcggtg cgggcggcgc gagcgatacg tgtcagtgcg gaccctcgca atattgtcgc
      601 gcggggacct gcttcgactg ctcggacgtg tcgaagctcg acttcggcgg ggccgaagag
      661 gtgctcgact atcccgacgg cgcgctcagg tttccgcgcg cgggtggcgc cgacggctcg
      721 ctcttcttca cgctcgtgac gaccagcgtg agcgagctct ggtacgcgcc cgctgtcgtg
      781 agctcccccg gcggcgtgct cgacgacggc cgcgtgccgc gggctgcgct cgactacttc
      841 ggcgatccgg gcggtttggg cttcgacgtg ctcttcgacg aaaccgccag cggcggtgcg
      901 cgcgcgatcc gcgccgccac gttcgacggc cacgcgctcg gcgcggcttt cgatgctccg
      961 ccgccgtttg cgccgtccgg cgccgacgat tacagcagca ccctcgcgcg tgaaaccaag
     1021 cgcgtctact tcatgaccac gctgagcggc gcacccgagc tcgtcacggg cgtgctcgac
     1081 gacgcggcca ccaagaccgt cgacctcaaa gtgcccgctc gcggcggcgg cacctgttcg
     1141 cgcaggggcg ccgacgccac gccttgggtc accgccgacg gacggctcct gctcttcagc
     1201 gcgcctctcg tcgacacggc ttgcaacacg gttgacggcg acgctacgga cgtgttcgtc
     1261 gccctgctca accccacgac gggcctgccg ctcgccacgg ccgtgcccat tgccggcatc
     1321 aatcactcgg ccgacacatc gagcgaaacc gacgcaagct ttacggcgga tctctgcgcc
     1381 gtgtacttcg cgtcggacgg cggcgaggca caaggccacg attttcgact ctaccgcgcg
     1441 cttcgccgtt gaacctgcgc gagcgatgag tcgcgagccc cgctcgagtc ggtgctagag
     1501 ccggcgcatg cctcctgcca tgcagtacac gcagctcgga cgctcgggcc tgaaggtcag
     1561 tcgcttctgc cttggtacga tgaacttcgg ccccgagacg agcgaagcgg attcgttcgc
     1621 catcatggac cgcgcgctcg agctcggaat caacttcttc gataccgcca acgtctatgg
     1681 ctggaagaag ggtgagggtg tcaccgaaca aatcgtcggc cgctggctcg cacagggcgg
     1741 cggacgtcgc gacaagatcg tgctcgccac caaagtctat ggggaaatgg gagcactccc
     1801 gaaccaaggc aggctgtccg cttatcatat ccgccgtgcc tgcgacgaaa gcctgcgccg
     1861 cctgcgcacg gacgtgatcg atctctatca aatgcaccac gtcgatcgcg cgacgccgtg
     1921 ggaggagatc tggcaagcgt tcgaggtcct gatccaacag ggcaaggtga tctacgccgg
     1981 atcctcgaat tttgccggct ggcacatcgc gcaggcctcg gagctcgcgc gtgcgcgggg
     2041 gctctacggg ctcatctccg agcagtgcaa gtacaacttg ctcacgcggc tcgtcgaaac
     2101 tgaaatccaa ccagcgtgtg agcggtatgg catcggactc atgccctata gtccgatcgg
     2161 tggcggtcta ctcgccggcg ccgggcgacg tggtggcgct gagcgccttc gacgcgagag
     2221 cgacttcgca aaacgtgaac gcgaaaagca tgcgagcgcg ctcgagcgat acgtcgcgct
     2281 ctgcgcggac attggccagg agcccgcgga cgtcgcgctg gcgtgggtcc tgtcgcgacc
     2341 tcaggttgcc gctccaatcg ttggacctcg cacgatggaa cagctcgagt cgtcgctcgg
     2401 cgcactcgag atccgtctcg aacccgacac gctcgagaag ctcgacgcga tcttccctgg
     2461 ctaccggccg tcgcctgaag cgttcgcctg gtgagccact ttctgttccc cctcacacag
     2521 aagatagcgg cgcgaccgag ggcacttggt gggggggagg ggggtggtgc tcagctcggc
     2581 cgcgcctatc ggtatgatac gacaaaactc gccgggcgct cgagtattgg ggtgagaaaa
     2641 agttcccgat gaaacgaggg gaaaccgacg agccggccag gcttagcgac cgagcagctc
     2701 gtcgtcgccg ctcggagcct cggccgcgcc cgtttcatcg aggccaaccg gagcgacgcg
     2761 cgctggtccc ggattgccaa tgcggcaatt tcccttgctg tccggtgact taccgaacgg
     2821 cagcttcttg gtcaccggcg cgacgtacac ctgcccgctg ccgagcggct tcgggatgat
     2881 ggcgccctga gcgagcgggc gccccgcgac tccgttctcc acatagacga ccacgtcgtt
     2941 gccccttcgc cgatagcccc agtaggacgc gccgaggctg cccttcgggt tcgtgcagcc
     3001 agtcccctcg gaagtcaggg ccatgaccag ttggcgctcg tcgtcgaccg ctggaggcgg
     3061 tcccttccaa ctgaaggcgc cgagggtcgc cgggcctagc accacgcgca ggcacgagca
     3121 ctgggtgggc ccctgagcgg ccgtcagagt gaggtcgctg cgcgctccga ggagagcatg
     3181 ctcgggtgcg ggcgcaggtg ctgcggcgga cgccacggcg ctgggcgtcg cgacggcgcg
     3241 ctccttttgc acttccgctt cgagctcggc gtccccttgg ccattcgcgc tcgcgccggc
     3301 gttgccctgc accgacgcgt ggcacgagca gacgcagagg agggccgcga ggacggggtt
     3361 tcgcacggcg caagcgtggc atcgcctccc gggcacggcc aagatccgcg ccgcgcggct
     3421 cagggcgccg ggcgtcgtcc gattcgaccc cgcgccgcga ctgaattgct aagctgcacg
     3481 gcgtggacct cgaggcgctc agggcggagc tagccgcgac gccgtcgctc cggcccgtgg
     3541 ggcgcgtcgt ggcggcgacg ggcgtgctct tgcgcgtggt gctgcccggt gcgcgcgtcg
     3601 gcgatctggt gcgcgtccgg cggccgagcg gcgatttgac ggccgaaatc gtggggtttg
     3661 acgcagagca cgcgctcgcg ttgccgctcg gcgagctcac cggcgtgggc cccgacgacg
     3721 ccgtggaagc gacggggggc cgcttcgata tcggtgtcgg cccggagctc atcgggcgcg
     3781 tgctcgacgg cctcggtcgt ccgctcgacg gactgccggc ccccgtgacg agcgagcgtg
     3841 cgcccgtcga tcgcgatcct ccgccagcgc tcgcgcgccg tcccgtgcgt gaagcgttcg
     3901 caaccggggt gcgcgcactc gacggcctgt tgacgctcgg catcggacag cgcgtgggct
     3961 tgttcgcagg ttcgggcgtc ggcaagagca ccttgctcgg cgcgatcgca cgcggctcga
     4021 gcgcggatgt cgtcgtcgtt gcgctcgtgg gcgagcgcgg gcgcgaggtg tcggagtttt
     4081 tgcaggagtc gctcggtgcc gaagggcaga agcgtgcggt cgtcgtggtg gcgacgagtg
     4141 acgcagagcc catcgagcgg ctccgcgcgg ctcaagtcgc gaccacggtc gc
//
LOCUS       DATIML010000371         2947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2672773, whole genome shotgun sequence.
ACCESSION   DATIML010000371 DATIML010000000
VERSION     DATIML010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2672773"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VLJ38_06385"
     CDS             complement(<1..189)
                     /locus_tag="VLJ38_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39172.1"
                     /translation="MSLPKTTLILEAITIAVAGELVSRTASAGAGKLLVFLHVALKQR
                     AFESELQAAMPGVEVRAVG"
     gene            400..2535
                     /locus_tag="VLJ38_06390"
     CDS             400..2535
                     /locus_tag="VLJ38_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSU39173.1"
                     /translation="MRSLGSVGLVLALLASTGHAWAKDPDAAEGVEDLDLVKLLNVQV
                     STATKTAESIDDAPAVITVVTRADIQRWGYQSVADVLQHTVGFYLIDDHILPNAGVRG
                     MTGGVGSESGMIKVMIDGRSVAYRSTSGNWLGVELVPLESIAQIEIIRGPVSALYGAD
                     AFLGVVNIITLKPEDVPKVRAKVALGLTETNPGGRFDVVGGTKLGHFDFMLGAAGEAT
                     DRTGLTLPAESPAPRLPDDIGTRRTTQNLERRSLVLQGRVGYRVPDKAEINVSAYASG
                     IKRGGDFASWAQLTNEVDAQGRQRGTTVSLGQFRLNLDSLVHAAPGFDIALSGTYFQG
                     GILPADTIDVASDLYYVERHSSYHGVDGTLEARLNPFKGANAVAGVETIFDREELDAP
                     ERIERATGIPVPSTRPDNPAINLVDVGAYANASYRLLDPWLKLNGGVRYDHHSQYGGQ
                     LTGRVGAISRWSKALVSKLLYGTAFKAPSPYLLYAQPLRLGDVIGNPNLKPQLIRTLE
                     YQLSFKPNRYFGVTSSVSYNWLLQKAEFTPEGSNLTARNVASQNSLSWETRADVSHDE
                     DYRFYGSFDLVYSTRELGQEGYVADLVGTKNPVYPPWIARGGALFALPSPARFPLQLG
                     AEGMWVAPRRAADVSVVERGQPFSLPSYFMLDVSLSTRAVYLVPGQETRFALRSRNLL
                     LARGPDPGFSGFEYPLAPAELFLEVEHSY"
     gene            2679..>2947
                     /locus_tag="VLJ38_06395"
     CDS             2679..>2947
                     /locus_tag="VLJ38_06395"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU39174.1"
                     /translation="MQLRTRATAAACALAFLAGGCAPAKEESTAGTIAVGALLPFTGK
                     EAALGRNMEQALLLAVHDVNEAGGVAGQKLRLVTRDSNSGSERGL"
BASE COUNT          491 a          993 c          940 g          523 t
ORIGIN      
        1 tccgacggca cgcacttcga ctccgggcat cgcagcctgc agctcgctct cgaacgcgcg
       61 ctgcttgagc gcgacgtgta gaaaaaccag gagtttcccc gcgcccgcgc tcgccgtgcg
      121 actcacgagc tcgcctgcga ctgcgatcgt gatcgcttcg agtatgagag tggtcttagg
      181 taggctcatc ggtgtcgttt gggctcactc gagacgagtt gccgtctgtc gacgctttga
      241 tcgcggatgc cgcgaacctt ccaacggtca aaattgttac cgcataagcc atgaagtttc
      301 gccgtgaccg accgtaggtt ggcttcggat gaaagcgtcg atctcgtcgt gcacgaacgt
      361 cgtgctcagt gacagttccc gagccagcgg actccgatga tgcgtagtct cggtagcgtc
      421 ggtctggtct tggcactgct cgcgagcacg ggtcatgcgt gggcgaaaga tcccgacgcg
      481 gccgaagggg tcgaggatct ggacctcgtg aagctcttga acgtccaggt ttcgacggcc
      541 acgaagacgg cggagagcat cgacgacgcg cccgcggtga tcaccgtggt gacacgcgcc
      601 gatatccagc gctggggtta tcagagcgtc gccgacgtcc tgcagcacac cgtcggcttc
      661 tacctcatcg acgatcacat tctgccgaac gccggtgtgc gcggcatgac gggcggcgtc
      721 ggctccgaga gcggcatgat caaggtcatg atcgacggtc gctcggtcgc gtaccgctcc
      781 acgtccggca actggctcgg cgtcgagctc gtgccgctcg aatcgatcgc tcagatcgaa
      841 atcatccgcg gccccgtgtc ggcgctctac ggcgcggacg cgttcctcgg cgtcgtcaac
      901 atcatcacgc tcaagcccga agacgtgccg aaggtgcgcg ccaaagtggc gctcggactc
      961 accgagacga acccgggcgg ccgcttcgac gtagtcggcg gcaccaagct cgggcacttc
     1021 gacttcatgc tcggggccgc gggcgaagcg accgatcgca ccggcctcac gttacccgcg
     1081 gagtcacccg ccccacgcct gcccgacgac atcggcacgc gccgcacgac gcagaacctc
     1141 gaacgccgct cgctcgtgct gcaagggcgc gtcggatacc gcgtgcccga caaggcggaa
     1201 atcaacgtca gcgcgtacgc atccggcatc aagcgcggcg gcgatttcgc gagctgggcg
     1261 caactcacga acgaagtcga cgcgcaggga cggcagcgcg ggacgaccgt ttcgctcggt
     1321 caatttcgcc tgaatctcga ctcgctcgtg cacgccgccc cgggtttcga catcgcgctc
     1381 tccggcacct acttccaggg cggtatcttg ccggccgaca ccatcgacgt ggcgagcgac
     1441 ctctattacg tggagcgaca ctcgtcttat cacggcgtcg acggcacgct cgaggcgcgc
     1501 ctcaatccgt tcaagggcgc gaacgccgtg gcgggtgtcg agaccatctt cgatcgcgag
     1561 gagctcgacg cgcccgaacg catcgaacgc gccacgggca tccccgtgcc ttcgacgcgg
     1621 cccgacaatc cggccatcaa tttggtggac gtgggcgcct acgccaacgc gagctatcga
     1681 ctgctcgacc cctggctgaa gctgaacggc ggcgtgcgct acgaccacca cagccaatac
     1741 ggcggtcagt tgaccgggcg cgtgggcgcg atctcccgct ggtcgaaggc gctcgtctcg
     1801 aagttgctct acggcacggc gttcaaggcg ccgtcgccgt acttgctcta cgcgcagccg
     1861 ctgcgtctcg gcgacgtgat cggtaatccc aacctgaagc cgcagctgat tcgaacgctc
     1921 gaataccagc tgtcgttcaa gccgaaccgc tacttcggcg tcacttcgtc ggtgtcgtac
     1981 aactggctct tgcaaaaggc cgagttcacg cccgagggca gtaacctgac ggcgcgcaac
     2041 gtcgcgagcc aaaattcgct gtcgtgggag acgcgcgccg acgtttcgca cgacgaggac
     2101 tatcgcttct acggctcgtt cgatctcgtg tactcgacgc gcgagctcgg gcaagagggc
     2161 tacgtcgccg atctggtcgg cacgaagaac cccgtctatc cgccgtggat cgcgcgcggc
     2221 ggcgcgctgt tcgcgctgcc gtcgcccgcg cgctttccgc tgcagctcgg cgccgagggc
     2281 atgtgggtcg caccgcggcg cgccgccgac gtgagcgtcg tcgagcgcgg tcagccgttc
     2341 tcgctgccga gctatttcat gctcgacgtg tcgctctcga cgcgcgccgt ctacctcgtg
     2401 ccggggcaag agacgcgctt cgccttgcgc tcgcgcaacc tgcttttggc gcgcggtccc
     2461 gatcccggct tttccggctt cgaatatccg ctcgcgcctg ccgagctttt cctcgaagtc
     2521 gagcactcct actgatgcga cgaggtcgga gccgaaccgc ggagtgtgtc ccagccgcta
     2581 cgtcgagcgt cgatgtgtgc gcggggagga gcgatgcagc gccccgtttc gacgttttcg
     2641 tacttaagtc gacgttcgcg cgttccgtac ggaagtacgt gcaattgcgc actagagcaa
     2701 cggccgcggc gtgcgcgctc gcgttcctcg ctggaggttg tgctcccgcg aaggaggagt
     2761 ctacggcggg gaccatcgcc gtgggtgcgc tcttgccctt caccggcaag gaagcggcgc
     2821 tcggccgcaa catggagcag gcactcttgc tcgccgttca cgacgtgaac gaagcaggcg
     2881 gcgtcgccgg ccaaaagctc cgcctcgtca cgcgcgacag caactcgggc tccgagcgcg
     2941 gcctcga
//
LOCUS       DATIML010000372         1701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2962364, whole genome shotgun sequence.
ACCESSION   DATIML010000372 DATIML010000000
VERSION     DATIML010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2962364"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VLJ38_06400"
     CDS             <1..342
                     /locus_tag="VLJ38_06400"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSU39175.1"
                     /translation="VRVDERALEIAVINLVDNAMKYAPEGGRVGVTVGQTQGSLEIRV
                     LDQGPGVAPEDRKRIFERFVRVKATEGKQVRGSGIGLALVKHIAEAHGGKAWVEANTP
                     RGSVFVLSVTR"
     gene            complement(332..>1701)
                     /locus_tag="VLJ38_06405"
     CDS             complement(332..>1701)
                     /locus_tag="VLJ38_06405"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSU39176.1"
                     /translation="GPWRVSEGAHTPGLRYLEGKVGTDAFLKAVQAAGVPVKETYRIV
                     TAFQGLKSFDHCAKTDRFAALVDAKTERLKAFEYIVSGEEVYQAREGTSGLLEASKLD
                     LKIERTQVAGALVYDGKNLDDSAEQAGFERGLARVIYKALDGHAALEDLERGDVIRLI
                     VQEVSVLGEFDRYAGVEALEVRHASGGDPLRVYYFDSAGARGYYDSKGRSPHQGGWRK
                     PIPGAPITSHFNLKRMHPILHKVVPHLGTDFGAPTGTPVGAAAPGTVIFVGLHGPTGN
                     LVKLEHQGGIETGYAHLSRFAEGLKVGDQVHRMQIIGYVGSTGRSTGPHLHFSASKNG
                     EFFDAEKLDLDGMRTLGGAERMSFDAVMAKYNPLLDGIALPEALPALPPEASSRPTAA
                     SDAPRAAGSAELEADEDESAAPPQPLPAPPPSGSPTRAGSSIYLTDKELKELQHATDD
                     GEVSE"
BASE COUNT          253 a          548 c          592 g          308 t
ORIGIN      
        1 gtgcgcgtcg acgaacgcgc gctcgaaatc gccgtcatca acttggtcga caacgccatg
       61 aagtacgcgc ccgagggcgg ccgcgtcggc gtcacggtcg gccagacgca gggctcgctc
      121 gagatccgcg tgctcgatca gggccccggc gtcgcgcccg aagaccgcaa gcgcatcttc
      181 gagcgcttcg tgcgcgtgaa ggcgaccgaa ggcaagcaag tgcgcggcag cggcatcgga
      241 ctcgcgctcg tcaagcacat cgccgaagcg cacggaggca aggcgtgggt cgaagcgaac
      301 acgccgcgcg gcagcgtgtt cgtgctgagc gtcactcgct gacttcgccg tcgtcggtcg
      361 cgtgctggag ctctttgagc tccttgtccg tcaagtagat gctcgagccg gcgcgtgtgg
      421 gcgagccgga cggtggtggc gcgggcaggg gctgtggcgg cgcggcggat tcgtcttcgt
      481 ccgcttcgag ctcggcactg cccgcggctc gcggcgcgtc acttgccgct gtgggcctcg
      541 aggacgcttc gggcggcagc gcgggcaggg cttcgggcag cgcgatgccg tcgagcagtg
      601 ggttgtactt ggccatgacg gcgtcgaagc tcatgcgttc ggcgccgcct agcgtgcgca
      661 tgccgtcgag atcgagcttc tccgcgtcga aaaattcgcc gtttttgctg gcgctaaaat
      721 gcagatgagg cccggtcgag cgtcccgtcg agccgacgta gccgatgatc tgcatgcggt
      781 ggacttgatc gcccactttg agaccctcgg cgaagcggga gaggtgcgcg tagccggttt
      841 cgataccgcc ctggtgctcg agcttcacga ggttgccggt cgggccgtgc aggccaacga
      901 aaatcacggt accgggcgcc gccgcgccga cgggcgtgcc ggtcggcgcg ccgaagtcgg
      961 tcccgaggtg cggcaccacc ttgtgcagga tcgggtgcat gcgcttcagg ttgaaatgtg
     1021 acgtgatggg agcgccgggg atgggcttgc gccagccgcc ttggtgcggc gaacgtcctt
     1081 tgctgtcgta atagccgcgc gcgccggcgc tatcgaagta gtacacgcgc agcggatcgc
     1141 cgccgctcgc gtgtcgcacc tcgagcgcct cgacgcccgc gtagcggtcg aattcaccga
     1201 ggaccgaaac ttcctgaacg atcagccgaa tcacgtcgcc gcgctcgaga tcttcgagcg
     1261 ccgcgtgtcc gtcgagcgct ttgtagatga cgcgcgcgag tccacgctcg aagccggctt
     1321 gctccgcgga gtcgtcgaga tttttgccgt cgtacacgag cgcgcccgcg acttgcgtcc
     1381 gctcgatctt gagatcgagc ttgctcgctt cgagcagtcc gctcgttcct tcgcgtgctt
     1441 ggtacacctc ctcgccgctc acgatgtact cgaacgcctt cagacgttcc gtcttcgcat
     1501 cgacgagcgc cgcgaagcga tccgtcttgg cacagtgatc gaagctcttg agcccctgga
     1561 aggccgtgac gatgcggtag gtctccttca ccggcacgcc ggcggcttgg acggctttga
     1621 ggaacgcgtc ggttcccacc ttgccttcga ggtagcggag cccgggagtg tgcgcgcctt
     1681 cgctcacgcg ccaagggccg g
//
LOCUS       DATIML010000373         6159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2962389, whole genome shotgun sequence.
ACCESSION   DATIML010000373 DATIML010000000
VERSION     DATIML010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6159
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2962389"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VLJ38_06410"
     CDS             <1..376
                     /locus_tag="VLJ38_06410"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39177.1"
                     /translation="GVTLEQYHELLREIGEAGFARLDIDTVEPSSAEPSPEALVMKRD
                     LASRVSSAISALPERLQVVLGLHYQEECTLREIGAVLGVSESRACQLHAEAIQLVRAV
                     LEGAPVTPHREARGERRRPVRI"
     gene            399..719
                     /gene="fliW"
                     /locus_tag="VLJ38_06415"
     CDS             399..719
                     /gene="fliW"
                     /locus_tag="VLJ38_06415"
                     /inference="COORDINATES: protein motif:HMM:NF014660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HSU39178.1"
                     /translation="MKIETTRFGNLEIDTQKIIHFPQGLIGFPEEKSFVMINHRGLDT
                     LAWLQSSRSPGIALPVVSVQAFAPHYPDVSLEDAAHRAGLEGSADDMAALVVSVPCRT
                     RPSP"
     gene            695..874
                     /gene="fliW"
                     /locus_tag="VLJ38_06420"
     CDS             695..874
                     /gene="fliW"
                     /locus_tag="VLJ38_06420"
                     /inference="COORDINATES: protein motif:HMM:NF014660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HSU39179.1"
                     /translation="MPNAPVTVNLVAPIIVNATTWQGLQTILDGTKFTTREVFVLPKA
                     EKPEVEAPAAAAAAR"
     gene            1125..3548
                     /locus_tag="VLJ38_06425"
     CDS             1125..3548
                     /locus_tag="VLJ38_06425"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HSU39180.1"
                     /translation="MTQTSMNAEIAIDEELWFGNPGEDKELEERASKSMAAVAARVLG
                     AKPFPPAARKLEELTRAGGAKIEQVVGVLESDPGLSMRLLRLVNSAGYALRVRCTSVR
                     HAAALVGMRRLHQLATTAAVLDLFETNSPSVKSLLSHAAVVGAFCRYIAVHVDLAPDE
                     LFTCGFLHDIGKLMLIDAEGDSYLALVEQAGEAPDALYLLEQEKYGFDHAVLGAHVLK
                     NWRIPNPVPRVVAWHHNVARAYQADPAIAAMVQALRLADQLSYLVRTHSEADGILAAA
                     QSPAATYLGMSEAQLSSMWSDLSRLSERIVSPGNADQAEVIPREDSIPPSLRPRERSK
                     LPNASLAPAQSLAASGGGSVSEVPKHFVCVVCKKASFGNRCPVCSGHVCAEHQVGAEQ
                     WCTDCSSAYAMEVGRHAFPLWERLTALGIVVGAGILSLIVALLAGRPVLGALFGSVLL
                     STLCVLLVLVGRRFWLKKVFFQMRGRSQHEHQHGLPLGLALPREPSIAMLSDAPEITL
                     RPTERINPRVEPHGLPALFSVAPTALDVSRSQAFSAPPGSLAPPVSVPPVPAAPPSEA
                     PSTFSSAGMSEAPQISVRPATLADAAAPAAAVPARFEQPASRRYADLHRADPTFVMPA
                     LTSRPDEEPSAPLHARPEPRTDAAAESELPPNGWRPVERTEPALPLSRRGGSSELRRL
                     AEALPSIPPAVERLVHLEQRRPTTERVPAPRTAPLPAAAPLNVTVPLASEPGDADAVV
                     VPPHAPVPNVEALVSSAASCETLPQPSLRAPLFVPEACNAVSPGLLVACRPNSLGPRR
                     YACSPAGAR"
     gene            complement(3714..4871)
                     /locus_tag="VLJ38_06430"
     CDS             complement(3714..4871)
                     /locus_tag="VLJ38_06430"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSU39181.1"
                     /translation="MDPRVDHDNCGACGMACGDEAACNDGACDNGTSIWPTLGGDVRH
                     SGFAVNERGTPPLSLAWKTQLAQGSLWPAVSDGSSVYVSNTSYFQQHSLWALSVADGS
                     LIWSYDFGDVFGIGQAAVVSGRVYIAQCNNNPGTYMYAFDAASGKVIWTQPFTAQWEN
                     YWAPIVVGSRLYFDGGEYGGLYALNRMTGASVFFNSKVGQYDEWSPLALGDRVYTFVD
                     GNLVAHDPDTGDEIEKVKTMWNWEGYEMLTSPISDGNSVFVISPPNLFAFTPDLATQT
                     WTANGGYAGMPAVANGVVYSLSAGQLRANDAESGEVLWTFTGDSKLEYPPVVVGNTIF
                     ASSADTVYAVDASTHDSVWSAEPGGWLSVAAGDVFVAQVDGTLAAYGLTRP"
     gene            5769..>6159
                     /locus_tag="VLJ38_06435"
     CDS             5769..>6159
                     /locus_tag="VLJ38_06435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39182.1"
                     /translation="MAFSLAACSGKSSAGQRQAGGSAGQGASSADGTGTGGEAAGLDY
                     FMSLEGDLPSRRLTQSCAEHETDASVPVFDLGDSLEASMQRFQAFIGCDGDERLEVWR
                     VLHPNDDSAGGFYTAADGVTYSVCGTTS"
BASE COUNT          995 a         2140 c         2030 g          994 t
ORIGIN      
        1 cggcgtgacg ctcgagcagt accacgagct cttgcgcgag atcggcgagg ccggcttcgc
       61 gcggctcgac atcgacaccg tggaaccgtc gtcggccgag ccgtcgcccg aggccctcgt
      121 gatgaagcgg gatctcgcct cgcgcgtgtc gtcggcgatc tcggcgttac ccgagcggct
      181 ccaggtcgtg ctcggcttgc actaccaaga ggagtgcacg ctgcgcgaga tcggcgccgt
      241 gctcggcgtc tcggagtcgc gcgcctgcca actgcacgcg gaagccatcc agctcgtgcg
      301 cgccgtgctc gaaggcgctc ccgtgacccc ccatcgtgaa gcacgcggcg aacggcgccg
      361 ccctgtccgc atctgactcg cactccccgg agaaacccat gaagatcgaa accacccgct
      421 tcggcaatct cgaaatcgac acccaaaaga tcatccactt cccgcagggc ctgatcgggt
      481 ttccggaaga gaagagcttc gtcatgatca accaccgcgg gctcgatacg ctcgcgtggc
      541 tgcaatcgtc gcgttcgccc gggatcgcgc tgcccgtggt gagcgtgcag gcgttcgcgc
      601 cgcattaccc cgacgtgtcg ctcgaggacg ccgcgcaccg cgccgggctc gagggttcgg
      661 ccgacgacat ggccgcgctc gtcgtctctg tgccatgccg aacgcgcccg tcaccgtgaa
      721 tctggtcgcg ccgatcatcg tcaacgcgac gacgtggcaa gggctgcaga ccatcctcga
      781 cgggacgaag ttcacgaccc gcgaagtgtt cgtgctgcct aaggcggaaa agcccgaggt
      841 agaagctccc gccgccgcag cagccgcacg ctgaagctgg tttcgagtga gggccagctg
      901 ggccgcaggc ccagcccgac atgcgctgtg agtcttggaa gaacagatca cgatctgcac
      961 gagccggaac aagccacgcg acctgccggc gaggccggcg cccgggccct ttcagtacac
     1021 gagggccgct gaatctaccc cgatgatctc caaaagcatt gaagcaagac ccgacgcgta
     1081 cggccgccaa acggcccggc gacgacacta ggaacggcag gcacgtgacg caaaccagca
     1141 tgaacgccga aatagccatc gacgaagagc tttggttcgg caaccccggc gaggacaagg
     1201 agctcgagga gcgcgcttcg aagagcatgg ccgccgtcgc ggcgcgcgtg ctcggagcga
     1261 agccgtttcc gcccgcggcg cgcaagctcg aggagctgac gcgcgccggt ggcgcgaaga
     1321 tcgagcaagt cgtcggcgtg ctcgagagcg atccgggact ttcgatgcgg ctgctccggc
     1381 tcgtcaattc ggcgggttac gccttgcgcg tgcgctgcac gtccgtgcgc cacgcggcgg
     1441 cgctcgtcgg catgcggcgc ctgcaccaac tcgcgaccac ggctgccgtg ctcgatctct
     1501 tcgagacgaa cagcccctcc gtcaaatcgc tcttgagcca cgcggcggtc gtcggcgcct
     1561 tctgccgcta catcgccgtg cacgtcgacc tcgcgcccga cgagctcttc acctgcggct
     1621 tcttgcacga catcggcaag ttgatgctga tcgacgccga gggcgactcc tacctcgcgc
     1681 tcgtcgaaca agcaggcgaa gcgccggacg cgctctacct gctcgagcaa gagaagtacg
     1741 gcttcgatca cgccgtgctc ggcgcgcacg tgctcaagaa ttggcgcatc ccgaaccccg
     1801 tgccgcgcgt cgtcgcctgg catcacaacg tggcccgcgc ctaccaagcc gatccggcga
     1861 tcgcggccat ggtgcaagca ctaaggctcg ccgatcaact gagctatctc gtgcgcacgc
     1921 actcggaggc ggacggcatc ctcgccgccg cgcagagccc cgcggcaacc tacctcggca
     1981 tgtccgaggc ccagctctcg agcatgtgga gcgatctgtc gcgcttgagc gagcgcatcg
     2041 tctcgcccgg caacgccgat caggccgagg tcatcccgcg cgaagattcg atcccgccct
     2101 cgctgcgccc gcgcgagagg tccaagctcc cgaacgcgag cctcgcgccg gctcaaagcc
     2161 tcgcggcgag cggcggcggc tccgtctccg aagtccccaa gcacttcgtg tgcgtcgtct
     2221 gcaaaaaggc gagcttcggc aatcgctgtc ccgtctgttc cggacacgtc tgcgccgagc
     2281 accaggtcgg cgccgaacag tggtgcacgg actgctcttc cgcgtacgcg atggaagtcg
     2341 gcaggcacgc gttcccgctc tgggagcgcc tgaccgcgct cggcatcgtc gtcggcgcgg
     2401 gcatcctgtc gctcatcgtg gcgttgctgg cggggcgacc cgtgctcggc gcgctgttcg
     2461 gctccgtcct gctttccacc ctttgcgtgt tgctcgtgct cgtggggcgc cgcttctggt
     2521 tgaagaaggt ctttttccaa atgcgcgggc ggtcgcagca cgagcatcaa cacggcttgc
     2581 cgctcggcct cgcgctgccg cgcgagcctt cgatcgcgat gctctcggac gcgccggaaa
     2641 tcacgctgcg gcccaccgaa cgcatcaacc cgcgtgtcga gccgcatggc ttgcccgcgc
     2701 ttttctcggt cgctccgacg gcgctcgacg tgagtcgctc gcaggccttc tccgcgccgc
     2761 ccggctcgct cgcaccgccg gtctcggtgc caccggtgcc cgctgccccg ccgtccgaag
     2821 cgccttcgac tttctcctcg gcgggcatgt ccgaggcgcc gcagatctcg gtccgcccgg
     2881 cgacgctggc tgacgccgcg gcccctgctg cagcggtccc ggctcgcttc gagcagcctg
     2941 cgtcccggcg ttacgccgac ctgcatcgcg ctgatcccac attcgtgatg ccggcgctca
     3001 cctcgcgtcc cgacgaagag ccgtctgctc cgctgcacgc gaggcccgag ccgaggacgg
     3061 acgccgccgc cgagtccgag ctgccgccga acggctggcg gccggtcgag cgcaccgagc
     3121 ccgcgctgcc gctgtcacgt cgcggaggct cgagcgagct gcgccgtctc gccgaagcgc
     3181 tgccctcgat tccgccggct gtcgagcgtc tcgttcacct ggagcaaagg cggccgacga
     3241 cggaacgtgt gcccgcgcca cgcaccgcac cgctgccggc cgcggcgccg ctcaacgtga
     3301 cggtgccgct cgccagcgaa cccggggacg ccgatgccgt cgtcgtgccg ccccatgcgc
     3361 ccgtcccgaa cgtcgaagcc ctggtttcga gcgccgcgtc ctgcgagacg ctgccgcagc
     3421 cgtccttgcg agcgcccttg ttcgtcccgg aagcgtgcaa tgccgtctcg ccggggttgc
     3481 tcgttgcgtg tcggccgaat tcgctcgggc cgcggcgcta cgcgtgtagt ccggccggcg
     3541 ctcgctgatc cacaccgcgc ggcaatggtt cgccgaagag cgcgccgcag gcgagcatgg
     3601 ccggtgcggg gatggcattc gacaagagct cctcccgact cggatgagtg cagttcacgc
     3661 tcacgtccca gcgctgcgtg aacgattgag gtcgttcgct ggcgtcgcca ccgctacggt
     3721 cgggtcagcc cgtacgctgc gagcgtgccg tccacctgcg cgacgaagac gtcccccgcc
     3781 gcaacggaga gccaaccgcc cggctcagcg ctccacacgg agtcgtgggt gcttgcgtcg
     3841 accgcgtaga cggtgtcggc gctcgaggcg aagatggtat tgcccacgac gaccggcggg
     3901 tattcgagtt tgctgtcgcc ggtgaaggtc cagagcacct cgccgctttc ggcgtcgttg
     3961 gcgcgcaact ggccggcgga aagggaatag acgacgccgt tggcgacggc cggcatgccg
     4021 gcgtagccgc cgttcgctgt ccaggtctgg gtcgccagat cgggagtgaa cgcaaacagg
     4081 ttcgggggcg agatgacgaa gacgctattg ccgtcggaga tgggcgacgt gagcatttcg
     4141 tagccttccc agttccacat cgttttgacc ttctcgatct cgtcgccggt gtcggggtcg
     4201 tgtgccacga gattgccgtc gacgaaggtg tagacgcggt cgcccagcgc aaggggactc
     4261 cattcgtcgt attgaccgac tttgctgttg aagaagacgc tcgcgcccgt catccggttc
     4321 agggcgtaga ggccgccgta ctcgccgccg tcgaagtaga ggcgcgaacc gaccacgatt
     4381 ggcgcccaat agttttccca ttgagccgta aagggctgag tccaaatgac tttgcccgac
     4441 gcggcgtcga acgcgtacat gtacgtgcct ggattgttgt tgcactgggc gatgtacacg
     4501 cgcccgctga cgaccgcggc ttgtcctatc ccgaagacgt cgccaaagtc gtagctccag
     4561 ataaggctgc cgtcggcaac cgaaagcgcc cagagtgagt gctgttggaa gtagctggtg
     4621 ttcgaaacat agaccgagga accgtccgag acagctggcc agagtgagcc ttgcgcgagc
     4681 tgggtcttcc aagccaagct gagtggcggt gtgccgcgct cgttgaccgc gaatccggag
     4741 tgacgcacgt ccccaccgag cgtcggccaa atgctggtgc cgttatcgca cgcgccgtcg
     4801 ttgcacgcgg cttcgtcacc gcacgccatg ccgcaggccc cgcagttgtc atggtccacg
     4861 cggggatcca cacagccgtc gtcacatgaa agctcagggc tcgagcaagc gacggtcccg
     4921 ccacccgctg atccgccctg cccggttttc cctccctgat gattggcgcc tccgctcgtt
     4981 ccgcccgtgg aagttcgacc cgccgtccct ccgcccgcct gtgagcgacc agccgcggaa
     5041 gtgccgcccg ttccgccacc gagactcacg cccccgcccg tgccggcggc gtcgcgtggg
     5101 atacaggctc cgcgatcgca aaactctgcc gagccgcacg tcatgccgca agccccgcag
     5161 ttcctggggt cgtagcgggc atccacgcag ctgtcgccgc acgaggacag cggcgcttca
     5221 cacgccgact cggatacgcc cacgaccgag cgcccacagc cgacgctcgc gccgagtgcc
     5281 agagcgactg cggcgacgtc acccgcgcta aacctggtcc gaaccgcacg catgcgtgcc
     5341 attttacgac ggcgccaagg gaaatcgaac tgggaaaacg gcgggcgcgt tgggcggccg
     5401 aggccgtcgt tagaggaggc gcggcccaga cagggaggtg cgtgtgggaa aaagtcggcg
     5461 catggtcgat gaacccagcc gctgccggct ggtagccgaa cgcaatgcac acgcccgccg
     5521 cggccggtga gcatagcgac tcaccgaacg agcggcagct cgagctggcg gagcggagta
     5581 gctcgtgtcc ggacggaaat gcttttcagc ctgtgacgga cagcggctga gggtggctgc
     5641 cagaattcgg catgagagag caccgttatt gacggcattc gcgcgggccc tcacgatcgt
     5701 gcgatgagga actggtggct cgcgtggggg aactgaggcg cacctgcgtc gggctctcga
     5761 tcgccggagt ggcgttctcg ctcgcagcgt gctccgggaa gagcagcgca gggcaaaggc
     5821 aggcgggcgg ctcggcaggg cagggcgcct cgagcgccga cggcaccgga accggtggcg
     5881 aggctgccgg actcgactac ttcatgtcgc tggaggggga tctgccgtcg cggcggctca
     5941 ctcaatcctg tgcggagcac gagacggatg cgagcgttcc cgtattcgac ctaggggaca
     6001 gcctcgaagc gtccatgcag cgctttcagg ctttcattgg ctgcgacggc gacgagcgcc
     6061 tcgaagtgtg gcgagttctc cacccgaatg acgattccgc cggtggcttc tacaccgcgg
     6121 cggacggggt cacctattcg gtgtgcggaa cgaccagcc
//
LOCUS       DATIML010000374         3286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5274460, whole genome shotgun sequence.
ACCESSION   DATIML010000374 DATIML010000000
VERSION     DATIML010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3286
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5274460"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /locus_tag="VLJ38_06440"
     CDS             complement(<1..608)
                     /locus_tag="VLJ38_06440"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSU39183.1"
                     /translation="MRRALWSHLLLPFLLTAAPACDEQAPDLREWRPSDHDHTSNPGT
                     DQVEGGPDAGTAPELAAHGLNEVVIVAWEQNCVRCHGRFGRGDGPQGPMVHAADLANA
                     AWQQTVKDDDILKVIRDGRGLMPAFPLPEPTLRALVQLVRLLGQAAAPHAADSAAAAA
                     SAPHAVRAAAAAPRASASSAPVKSPHGAHSATDPALAAPAASS"
     gene            complement(679..1362)
                     /locus_tag="VLJ38_06445"
     CDS             complement(679..1362)
                     /locus_tag="VLJ38_06445"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU39184.1"
                     /translation="MMRTKTLAFLLVGSLATVPLLEGCAAQASFQAGSGQPQPPPPPP
                     PAPPPPAAPATQPAATATATTAPPPPAPTTAPAQPAPAPAKSDVKVSGDKVDIPGQIE
                     FETGKATLKQTDETNKALGQVKAFLDANPRVTKLRIEGHTDNVGAAATNLELSGQRAL
                     TVKNYVVGKGVDKARIIAVGCGQDKPVADNTTEAGRAKNRRTEFRIAELSGERYMGHD
                     PTGGCKTFE"
     gene            1602..>3286
                     /gene="dnaE"
                     /locus_tag="VLJ38_06450"
     CDS             1602..>3286
                     /gene="dnaE"
                     /locus_tag="VLJ38_06450"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HSU39185.1"
                     /translation="MTEFVHLHVHSQYSFLTGAVKLGALPGKVKAHGMRAVALTDHAN
                     MYGALRHYNACRSAGVQPILGSELNVLRGGNGLCHLVVLAADDTGYRNLVSLVSQSHL
                     SPASELAPSITLDAIAARSKGLVALSGCLGGFAPQNVLELGPERAQGALGELSDVFER
                     GSLFVELQDHGFPEQGVLNPILIEAARALDLPLVASNDVHFVEREDGPAHLYLECVRL
                     GRTLTEAQPLHHGSAEMFLKSPEQMGELFRATPEALSNTLRVAEMCSGVKLKLGESEL
                     PTFSVPAGYDTEAYFRHVSREGFEERLTLLRCADPKLDEAKYRARLELELDVIAGMKY
                     PGYFLIVWDFIRAAKARGIPVGPGRGSGAGSLVAYSLGITELDPLRYDLLFERFLNPE
                     RVSMPDFDIDFCMSRRDEVINYVAQKYGTDCVGQIGTFQNLKARSVIKDVARAMGIAA
                     PEAQRIASLVPPKGQGKMCTIDEALEVEPKLKQLVESDPRVAELIEQSRRLEGLTRHA
                     GMHAAGIVISEGSLAERVPCFKSDASIVTQYDKDDIEAVGLVKFDFLGLKTLTL"
BASE COUNT          490 a         1096 c         1134 g          566 t
ORIGIN      
        1 gagctggccg ccggcgcggc gagcgccggg tccgtcgccg agtgcgctcc gtgcggcgat
       61 ttcacgggcg cgctcgacgc gctcgcacga ggtgcggccg cggcggctcg aacggcgtgc
      121 ggcgcgcttg ctgcggctgc agccgagtca gccgcgtgcg gggccgcagc ttgtccgagc
      181 aggcgcacga gttgcacgag cgcgcgcagc gtgggctcgg gcagggggaa cgcgggcatg
      241 agtccgcgtc cgtcgcgaat cactttcagg atgtcgtcgt ccttcacggt ctgttgccac
      301 gcggcgttcg cgaggtccgc cgcgtgcacc atcggtccct gcgggccgtc gccgcgtccg
      361 aaacggccgt gacagcgtac gcaattctgc tcccaagcga cgatcacgac ttcgttcaag
      421 ccgtgtgcag cgagctcggg cgcggtgccg gcgtccgggc cgccttccac ctgatcagtg
      481 cccggattgc tcgtgtggtc gtgatcggac gggcgccact cgcgcagatc gggcgcttgc
      541 tcgtcgcagg ccggagccgc cgtgagcagg aatggaagca aaaggtggga ccagagggcg
      601 cggcgcacgc gggcggtcat agcatgcgtg cgcgcgccgt ccgtcgagct cgggccggct
      661 ttcgaatccg agctcggctc actcgaaggt tttgcagccg ccagtcgggt cgtggcccat
      721 gtagcgttcg ccgctgagtt ccgcgatgcg gaactcggtg cggcggtttt tggcgcggcc
      781 ggcttcggtg gtgttgtcgg cgaccggttt atcttgcccg caacccaccg cgatgatgcg
      841 ggctttgtcg acgcccttgc cgacgacgta gttcttgacc gtcagggcgc gctgtccgga
      901 aagctcgagg ttggtggccg ctgccccgac gttgtcggtg tggccctcga tgcggagctt
      961 ggtaacgcgg ggattggcgt cgaggaatgc tttcacctga ccgagcgcct tgttcgtctc
     1021 gtccgtctgc ttgagcgtcg ccttgcccgt ctcgaactcg atttggcccg ggatatccac
     1081 cttgtcacct gagaccttca cgtcgctttt ggctggagcg ggagcgggct gagcgggcgc
     1141 cgtggtgggg gcagggggtg ggggcgccgt cgtcgcggtc gctgttgctg ccggctgcgt
     1201 cgcgggagct gccgggggcg gcggcgcggg cggcggcgga ggtggcggtt gtggctggcc
     1261 gcttccagct tgaaaggacg cctgggcggc gcagccttcg agcaggggaa cggtcgcgag
     1321 cgacccgacg agcaagaacg ccaatgtctt cgtccgcatc atcacgccca aatctcctct
     1381 acacctgttc caccagcgcg gctgcgccgc aaaggttgcc cggctgcggg cgccttcagg
     1441 aaagcggtag cccaactgcc cgggatcccg caaggcgggt cgtttccgag ccgaccgttc
     1501 gacggcagcc cgcccgagct tgttcacgaa tcccgcggaa ccggccggtc ggtcatgcac
     1561 ggccgccgaa gccctggtag tacctgctct ccccctttcg aatgaccgag ttcgtccacc
     1621 tgcacgtcca ctcccagtac tcgttcctca cgggggcggt gaagctcgga gcgcttccgg
     1681 gcaaggtgaa ggcgcacggc atgcgcgccg tggcgctcac cgaccacgcc aacatgtacg
     1741 gcgcgctcag gcattacaac gcgtgccgct cggccggcgt gcagccgatc ttgggctcgg
     1801 agctcaacgt cctgcgcggc ggtaacgggc tctgtcacct cgtcgtactc gccgcggacg
     1861 acaccggtta tcgaaacctg gtttcactcg tgtcgcagag tcacctctcg cccgcgagtg
     1921 agctcgcacc cagcatcacc ctcgatgcca ttgccgcgcg cagcaaggga ctcgttgcgc
     1981 tgagcggctg cctcggcggc tttgcgccgc aaaacgtgct cgagctcggc ccggagcggg
     2041 cgcagggcgc gctcggcgag ctctcggacg tattcgagcg cggcagtctc ttcgtcgagc
     2101 tccaggacca cggctttccc gaacaaggcg tgctcaatcc catcctgatc gaggccgcgc
     2161 gcgcgctcga tctcccgctc gtcgcgtcga acgacgtgca cttcgtcgaa cgcgaagacg
     2221 gcccagcgca tctttacctc gaatgcgtgc ggctcggccg cacgctgacc gaggcccagc
     2281 cgctgcacca cggcagcgcc gagatgttct tgaagagccc ggagcagatg ggcgagctct
     2341 tccgcgccac gcccgaggcg ctctcgaaca cgctgcgcgt cgcggagatg tgttccggcg
     2401 tcaagctcaa gctcggtgag tcggagctgc cgacgttctc cgtgcccgcg ggctacgaca
     2461 ccgaggctta cttccgccac gtgtcacgcg agggcttcga agagcggctc acgttgttgc
     2521 ggtgcgcgga tccgaagctc gacgaagcga agtatcgcgc gcggctcgag ctcgagctcg
     2581 acgtgatcgc gggcatgaaa tacccgggct acttcctgat cgtctgggat ttcatccgcg
     2641 ccgccaaggc gcggggcatt ccggtgggcc ctggacgcgg ctcgggcgca ggctcgctcg
     2701 tcgcctattc gctcggcatc accgagctcg acccgctgcg ttacgacctc ttgttcgagc
     2761 gcttcttgaa tcccgagcgc gtgagcatgc cggacttcga catcgatttc tgcatgtcgc
     2821 ggcgcgacga ggtcatcaac tacgtcgcgc agaagtacgg caccgactgc gtcggccaga
     2881 tcggcacgtt ccagaacctc aaggcgcgca gcgtgatcaa ggacgtcgcg cgtgccatgg
     2941 gcatcgccgc gcccgaggcg cagcgcatcg cgagcctcgt gccccccaag gggcagggca
     3001 agatgtgcac gatcgacgag gcgctcgagg tggagccgaa gctcaaacag ctcgtggaga
     3061 gcgacccgcg cgtcgccgag ctgatcgagc agagccgaag gctcgaggga ctcacgcgcc
     3121 acgccggcat gcacgccgcc ggcatcgtga tcagcgaagg gtcgctcgcc gagcgcgtgc
     3181 cgtgcttcaa gagcgacgcg agcatcgtca ctcaatacga caaggacgac atcgaagcgg
     3241 tcgggctcgt caaattcgac tttttgggcc tgaagacgct cacgct
//
LOCUS       DATIML010000375         4814 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2673200, whole genome shotgun sequence.
ACCESSION   DATIML010000375 DATIML010000000
VERSION     DATIML010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4814
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2673200"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1034
                     /locus_tag="VLJ38_06455"
     CDS             <1..1034
                     /locus_tag="VLJ38_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU39186.1"
                     /translation="RMTIVKSVRKAAERQKLVVENRSLRQELKLLTTREIVGQSAMLR
                     RVLDVATQAAPSSATVLILGESGTGKELLARYLHGKSARAQGPFIAVNCAAIPESILE
                     AELFGHERGAFTGAVARREGRFARARGGTLFLDEIGELSPAVQVKILRVLQEGEYEPI
                     GGNTVQSDARIIAATNRDLAAEVEAGRFREDLYYRLNVIALTAPPLRSRREDVPLLVD
                     HFLGVYCKKNGRARLTVPREVLARLMDYGWPGNVRELENVVERAAVLCRGDVLRLEDL
                     PDSVAQATAPPPDALSFPIGTPLDEVEMRMIRQTLKHTQGDKQLAAQLLRISARTIYR
                     KLGEAEGPH"
     gene            1196..2185
                     /gene="gspC"
                     /locus_tag="VLJ38_06460"
     CDS             1196..2185
                     /gene="gspC"
                     /locus_tag="VLJ38_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspC"
                     /protein_id="HSU39187.1"
                     /translation="MSLDPLLRKYFPVLVLALLALSAYFEASGASELVGAAFIAPPAS
                     GSAARLPLHPPLTLPRTEPRTAEPIIERNPFDSVTGPLNAKPIDTPAPVPKDTELVAK
                     DPLHADQCEGITAFIITESDDRLWSVAALQGTGEPRPRMRRIGDDVAGKRVEYIGYNP
                     VENSPSVWLSNAGTLCQALLFRTAPPPAPVASAAPAEAPAPAAPSHGAPTVPSDIASK
                     IQKISDTEFKIDHGVIDNILEHQAELMKSARIVPEQKDGKVLGIRLFGIRPDTLLGTL
                     GIQNGDRLESINGFNMGSPEKALEAYARLRTATSLNVKVSRRGAPVSIDYQIQ"
     gene            2182..4812
                     /gene="gspD"
                     /locus_tag="VLJ38_06465"
     CDS             2182..4812
                     /gene="gspD"
                     /locus_tag="VLJ38_06465"
                     /inference="COORDINATES: protein motif:HMM:TIGR02517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
                     /protein_id="HSU39188.1"
                     /translation="MKTPARSLRTLLLVLAAAAIAEPALAQDDPAADPAAPAPKPRRP
                     RVLQRRPRRPRPPATPAPEEQAPVEVSPAAGTPPGAPPAAPSSPSDKEPPGAAGPLPS
                     NMDKIAQAADVPYHAKPGGHMVKFNLNDADLAELVNHISGLTGRRFIYGAKVRQIKAT
                     VVSPEPVTLDEAYQAFLSILEANGMTVVPHGRFYKIIDSGGVVTQPTPIVARGEPVPD
                     ADRYITRLYRLENATPDDVAAVLNKFKSKDGDITPYAPGRLLIITDTATQVRRLIRII
                     EEIDIGGSGQHMWIEPVHHGTAADMAKRLNELFEIGAPGAAAAAGAPGTAKQPSGISR
                     VVADDQSQSLIVVGTEDSYLKLLELLKRLDTQGTDAGHIHVLPLQYAIADELSQTLTQ
                     MLAGQANKQAGATGVGTAGGMFEGDVRVTPDKSTNSLIVTSSGRDFATFRLVIDKLDR
                     PRRQVFIEAVIMDMGVSDTLDMGVSFHGGHSFGGGANDPFLLSGFNAGKSLAFPQDPS
                     LLQGFAAGVRGSELPGTQDLLGPGISIPAFGVVLNALASGGRTNSLATPHIIATDNVV
                     AEISIGENIPLQTNAGGTSVGSLAGLAGGSAATAGIAPLLGLGGGFGFNAPRQDVGNK
                     IKVTPHINESNQVRLEIDQESSAPGAPVGTLGAVPITKRTANTTVVVADQQTVVIGGL
                     MRDEYTVSREKVPILGDLPVLGALFRHSNTVKRKTNLLLILTPHVIREQADLRRIFER
                     KMEERQEFIDRYFVFSDVDWKPPKDWSRTNGLVENIRQAYLKNEVQEEVERESKSYED
                     TGERAPSEPIELPTSVREGNSAELVAKPKAAAPAKAAPAKPAPQRAPARPRGGGRRGE
                     LDSPIIVNPIARSVSFERVE"
BASE COUNT          839 a         1690 c         1566 g          719 t
ORIGIN      
        1 agcgcatgac gatcgtgaag agcgtgcgca aagccgcaga gcgtcaaaag ctcgtggtcg
       61 agaaccgttc gctccggcaa gagctcaagc tgctcacgac gcgcgagatc gtgggtcaga
      121 gcgcgatgct caggcgcgtg ctcgacgtgg cgactcaggc cgcgccgtcg agcgcgacgg
      181 tgctgatcct gggcgagagc gggacgggca aggagctcct cgcgcgttat ctacacggca
      241 agagcgcgcg cgcgcagggg ccgttcatcg ccgtcaattg cgccgcgatc ccggagagta
      301 tcctcgaggc cgagctcttc ggtcacgagc gcggcgcgtt cacgggcgcc gtcgctcgtc
      361 gcgaaggacg ctttgcgcgc gcgcggggcg gcacgctttt cctggatgaa atcggcgagc
      421 tcagccccgc cgtgcaggtg aagatcctgc gcgtgctcca ggagggggag tacgagccca
      481 tcggcggtaa caccgtgcag agcgacgcgc gcatcatcgc cgcgaccaac cgcgacttgg
      541 cggccgaggt cgaggccggc cgctttcgcg aggacctcta ttaccgcctc aacgtgatcg
      601 ccctgacggc gccgcccctc cgctcgcggc gtgaggacgt gccgctgctc gtcgatcatt
      661 tcctcggcgt ctattgcaag aagaatggac gcgctcggct cacggtcccg cgcgaggtgc
      721 tcgcgcggct catggactac ggttggcccg gcaacgtgcg cgagctcgag aacgtcgtcg
      781 aacgcgcggc cgtgctctgt cgcggcgacg tgctgcggct cgaggacctg ccggactccg
      841 tggcgcaagc gaccgcgccg ccgcccgacg cgttgtcttt tcccatcggc acgcccctcg
      901 acgaggtcga gatgcggatg attcggcaga ccttgaagca cacgcaaggc gacaagcagc
      961 tcgccgcaca gctcctacgc atctcggccc gtacgatcta ccgcaaactc ggcgaggcag
     1021 agggaccgca ctgacaaagt ggcaacgctc ggccccgcta atgcgaaaac cggtcaggtt
     1081 gtcgaagacg ctgccgaact gaccgctggg cattgcataa aaactgctgg aatatccgtt
     1141 cgttcgtgcg gtagctagcg gctggcacgg cgttcgctta gttcggctcg gaccattgtc
     1201 tctcgacccc ctgctccgta agtacttccc ggtgctcgtg ctggcactgc tcgccctcag
     1261 tgcctacttc gaggcgtcgg gggcgtcgga gctcgtgggc gcggcgttca ttgcgccgcc
     1321 tgcgagtggc agcgccgctc ggttgccgtt gcatccgccg ctcacgctgc cgcggacgga
     1381 gccgcgtacg gccgagccca tcatcgagcg taaccctttc gattcggtga cggggccgct
     1441 caacgcgaag cccatcgata cgcccgcgcc cgtgcccaag gacaccgagc tcgtcgccaa
     1501 ggatccgctc cacgccgatc agtgcgaggg catcacggcg ttcatcatca cggaatccga
     1561 cgaccggctc tggtcggtgg cggcgctcca aggcaccggc gagccgcggc cccgcatgcg
     1621 ccgcatcggc gacgacgtag cgggcaagcg cgtcgagtac atcgggtata accccgtgga
     1681 aaacagcccg tccgtctggc tctcgaacgc cgggacgctg tgtcaggcgc tgctcttccg
     1741 caccgcgccg ccgcccgccc cggtcgcctc ggccgcgcca gccgaagcac cggcgcccgc
     1801 cgcgccgagc cacggcgccc cgacggtacc ctccgacatc gcctctaaga tccagaagat
     1861 cagcgacacc gagttcaaaa tcgatcatgg cgtcatcgac aacatcctcg agcatcaggc
     1921 cgagctcatg aagtcggcgc gcatcgtgcc cgagcagaag gacggcaaag tgctcggcat
     1981 ccgtctgttc ggcattcgtc ccgacaccct cctcggcacg ctcggcattc aaaacggcga
     2041 tcggctcgag agtatcaacg gcttcaacat gggtagcccc gagaaagccc tcgaggccta
     2101 cgcccgtctc cgcaccgcca cgagtctcaa cgtcaaggtg agccgtcgcg gcgcgcccgt
     2161 gagcatcgat tatcagatcc aatgaagacg cctgcccgct ccctgcgtac cttgttgctc
     2221 gtgctcgcgg ccgctgcgat cgcggagccg gctctcgcgc aagacgaccc ggccgcggat
     2281 cccgctgctc cggcgccgaa gccgcgccgg ccgcgcgtgt tacagcgccg cccccgtcgg
     2341 ccgaggccgc cggcgacgcc cgcgcccgaa gagcaagcgc ccgtggaagt gtccccggcc
     2401 gccggtaccc ccccgggtgc tccccccgct gcgccttcga gtccaagcga caaggagccg
     2461 ccgggcgcgg ccggcccgtt gccgtccaac atggataaaa tcgcgcaggc ggcggacgtg
     2521 ccgtatcacg cgaagccggg cggccacatg gtgaagttca atctgaacga cgccgatctc
     2581 gccgagctcg tcaatcacat cagcggcctc acgggccggc gcttcatcta cggcgccaag
     2641 gtccgtcaga tcaaagcgac cgtggtgtcg cccgaaccgg tgacgctcga cgaggcttac
     2701 caggccttcc tctcgatcct cgaggcgaac ggcatgacgg tcgtgccgca cggccgcttc
     2761 tacaagatca tcgacagcgg cggtgtcgtc acgcagccga cgccgatcgt cgcgcgcggt
     2821 gagcccgtgc ccgacgccga ccgctacatc acgcggctct accggctcga gaacgcgacg
     2881 cccgacgacg tcgccgccgt gctcaacaaa ttcaagagca aggatggcga catcacgccg
     2941 tacgcgccag gtcgcctgct catcatcacc gacaccgcca cgcaggtgcg gcggctcatc
     3001 cgcatcatcg aggaaatcga tatcggcggc tccggccagc acatgtggat cgagcccgtg
     3061 caccacggca cggccgccga catggccaag cgcttgaacg agctcttcga aatcggcgcg
     3121 ccgggcgcgg cagctgcggc gggagccccg ggtacggcca agcagccgtc gggcatctcg
     3181 cgcgtggtcg ccgacgatca gtcgcagagc ctgatcgtgg tcggcacgga ggactcgtac
     3241 ctgaagctgc tcgagctctt gaagcgactc gacacgcagg gcaccgacgc gggccacatc
     3301 cacgtgctgc cgctgcagta cgcgatcgcc gacgagctct cgcagacgct gacgcagatg
     3361 ctcgccgggc aagcgaacaa gcaggcgggc gccacgggcg tcggcacggc gggcggcatg
     3421 ttcgagggcg acgtgcgcgt gacgcccgac aagagcacca actcgctgat cgtgacctcg
     3481 tcgggtcggg acttcgcgac gttccggctc gtgatcgaca agctcgatcg cccgcgccga
     3541 caagtgttca tcgaagcggt catcatggat atgggcgtct cggacacgct cgacatgggt
     3601 gtctccttcc acggcggcca tagcttcggc ggcggcgcga acgatccgtt cctgctctcc
     3661 ggcttcaacg ccggtaaatc cctggcgttc ccgcaggatc cgagcttgct ccagggcttt
     3721 gccgccggcg tccgcggcag cgagctccct ggcacgcagg acttgctcgg tccgggcatc
     3781 agcatccccg cgttcggcgt ggtcttgaac gcgctcgcgt cgggcggccg taccaacagc
     3841 ctcgcgaccc cgcacatcat cgcgaccgac aacgtcgtgg ccgaaatcag catcggtgag
     3901 aacatcccct tgcagaccaa cgccggcggc acgagcgtcg gctcgctagc gggtctcgcg
     3961 ggcgggtcgg ccgccacggc gggtatcgcc ccgctgctcg gcctcggcgg cggcttcggc
     4021 ttcaacgcac cgcgccagga cgtcggtaac aagatcaagg tcacgcccca catcaacgag
     4081 tcgaaccagg tgcggctcga gatcgatcaa gaatcgagcg cgccgggcgc ccccgtcggc
     4141 acgctgggtg cagtgccgat caccaagcgc accgccaata cgacggtggt ggtcgccgac
     4201 cagcagacgg tcgtgatcgg cggcctgatg cgcgacgagt acacggtctc gcgtgaaaag
     4261 gtgccgattt tgggcgattt gccggtgctc ggcgcgctct tccgtcactc gaacacggtg
     4321 aagcgcaaga cgaacctgct cttgatcctg acgccccacg tgatccggga acaggccgac
     4381 ttgcgccgca tcttcgagcg caagatggag gagcggcagg agttcatcga ccgctacttc
     4441 gtgttctcgg acgtggactg gaagccgccg aaagactggt cgcgcacgaa cggcctggtc
     4501 gaaaacattc gtcaggccta cctcaagaac gaggtgcaag aggaggtcga aagggagagc
     4561 aagtcctacg aggacacggg cgagcgcgcg ccgagcgagc ccatcgagct gccgacgagc
     4621 gtgcgtgaag gcaactccgc cgagctcgtc gcgaagccca aggcggccgc gcccgccaag
     4681 gccgcgcccg cgaagcccgc gccgcagcgc gcgcccgccc gtccacgcgg cggcggtcgt
     4741 cgcggcgagc tcgattcgcc gatcatcgtg aaccccattg cgcgcagcgt gagcttcgag
     4801 cgagtcgaat gacg
//
LOCUS       DATIML010000376         3139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_941187, whole genome shotgun sequence.
ACCESSION   DATIML010000376 DATIML010000000
VERSION     DATIML010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_941187"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1875
                     /locus_tag="VLJ38_06470"
     CDS             <1..1875
                     /locus_tag="VLJ38_06470"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU39189.1"
                     /translation="VKLTIAGIALSPEYVMQIPPGARSPDDRRFAVLWMSRAELEGLV
                     DLRSAFNEVALKLAPRGSEREVIDQLDRLLEPYGGHGAYGRSSQVSHVMLEEHIGELR
                     PLALVVPGIFLAVAAFLVNVVLGRIVATEREQVGMLKAFGYSNGRVAAHYFEFATLVA
                     ACGVLLAIPAGAWLARVTSVFFATFFRFPVLVFRLEPAVLAVAVLVGLVPASLGALGM
                     VKRVVSLPPIVAMAPEAPSFSRTFIDRWGVLGWLPPALRMIFRNVSRHPLRAGLTLAG
                     MAFAVAVVVLGSSLNDAIHRSENVQFQAAQREDIAVNLSHLRPLGTASEFLKLPGVRR
                     AEPYRIVAARVGAAGSTQNATLFGLPANGTLRRPTGNHYELASIVPNGVFVTAWLAQR
                     FHLKRGDLLPIEIREGRRRTVMTHVAGFIDEPLGVSIYMELGGLDRLLEEPETYSGVN
                     LRLDPAHEREFYDVLKRTPEAIAVSVRRGTLANFRAMSETIVTFIRQIEVVFSVIIAF
                     GVVYNGARIALAERSRELATLRVLGFTRAEISVVLLGEVALLATPAISLGLIAGYALA
                     GVVVRSMASSSMHVPLVVEASTYAFAVVIFAAAALASALVVRRRLDALDLVSVLKARE
                     "
     gene            1878..3071
                     /locus_tag="VLJ38_06475"
     CDS             1878..3071
                     /locus_tag="VLJ38_06475"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSU39190.1"
                     /translation="MTRVKMRRTLWAGIGALLLVLAGWLLRPEPLMVEAAPVTRGLLR
                     ATVTGEGRTRVKALYTVTAPVDGELERITLDPGAALATDTVVARIRPAASRPLDARSR
                     AEAAAAVVAAREAVSRAEAAEREASVAVEHADSKLARSQKLAQTDAVPQAELEHAGHE
                     MLMAKATLESGQAAVREARADLARATAVITPTSGARGAAFEVKSPATGKVLRVLHESA
                     GPIAAGTPLLEIGDVSALEINSDLLSSDAATVRPGATATISGWGGQPFSARVRRVDPA
                     GFTKVSALGLEEQRARVVLELTDPPPRGLGHDYRVDVAIVVWEGKDVLRIPTTALFRV
                     GKDWATFAIRDGFARLTKVETGPSDASLTVVKSALAPGENVIPQPSDAIKEGMRVRVL
                     RELTP"
BASE COUNT          481 a         1064 c         1025 g          569 t
ORIGIN      
        1 gtcaagctca cgatcgcggg catcgcgctc tctcccgaat acgtgatgca aatccctccc
       61 ggggcgcgct cacccgacga tcgacgcttt gccgtgctct ggatgtcgcg cgccgagctc
      121 gaggggttgg tcgatctgcg cagcgcgttc aacgaagtag cgctgaaact cgccccgcga
      181 ggcagcgaac gagaggtgat cgaccaactc gatcgactgc tcgagcctta cggaggccac
      241 ggcgcctacg ggcgttcgag ccaggtgtcg cacgtcatgc tcgaagagca catcggggag
      301 ctccggccgc tcgcgctcgt ggtgcccggg atttttctcg ccgtcgcagc attcctcgtc
      361 aacgtcgtgc tcggtcgcat cgtggcgacc gaacgcgagc aagtcgggat gctgaaagcg
      421 ttcggttact cgaatgggcg cgttgccgcc cattacttcg agtttgcgac cctggtcgct
      481 gcgtgcggcg tcctcttggc cataccggct ggcgcgtggc tcgcgcgcgt aacgtccgtg
      541 tttttcgcca ccttcttccg cttcccggtc ctcgtgtttc gtctcgagcc ggcggtgctc
      601 gcggtggcgg tgctggttgg gctcgtgccg gcgtcgctcg gagcgctcgg catggtgaaa
      661 cgcgtcgtgt cgctgccccc gattgtcgcc atggccccgg aagcgccctc cttctcgcga
      721 acattcatcg atcggtgggg agtgcttggc tggctcccac cggcgctgcg catgatcttt
      781 cgcaacgtct cgcggcaccc gctccgcgcc ggactgacgc tcgcgggcat ggccttcgcg
      841 gtcgccgtcg ttgtcctcgg cagctcgctc aacgacgcca ttcaccgctc ggagaacgtt
      901 cagttccagg ctgcgcagcg cgaagacatc gcggtcaacc tctcgcacct gcggccactc
      961 ggaacggcga gcgaatttct aaagctgccc ggcgttcgcc gggccgagcc ctaccggatc
     1021 gtcgcggccc gcgttggcgc ggctgggagc acacagaatg cgacgctctt cggtttgccc
     1081 gcgaacggca ccttgcggcg acccacgggc aatcactacg agctcgcttc gatcgtaccg
     1141 aacggcgtgt tcgtcaccgc ttggctcgct cagcgctttc acctgaaacg cggcgacctc
     1201 ttgcccatcg aaatacgtga aggacggcgc aggacggtca tgacccatgt cgcgggtttc
     1261 atcgacgaac cgctcggcgt ctcgatttac atggaactcg gcgggctcga ccgcctcctc
     1321 gaggagcccg agacctattc cggcgtgaat cttcgactcg atcccgcgca cgagcgcgag
     1381 ttctacgacg tgctcaagcg cactcccgag gccattgccg tctccgtgcg tcgcggaacg
     1441 ctcgcgaact ttcgggcgat gtccgagacg atcgtgacct tcatccggca aatcgaggtg
     1501 gtcttctcgg tgatcatcgc attcggcgtc gtctacaacg gggcacgcat cgccctggcc
     1561 gagcgcagcc gagagctcgc gaccttacgc gtcctcggct tcacgcgcgc cgaaatctcc
     1621 gtcgtgttgc tgggcgaagt ggctctgctc gcgacgccag cgatctcgct cggtctgatc
     1681 gcggggtatg cgctcgcggg cgtcgtcgtg cgttcgatgg cgagctcgag catgcacgtc
     1741 ccgctcgtcg tcgaagcgtc gacgtacgcg ttcgcggtcg tcatcttcgc cgcggccgcg
     1801 ctcgcttcgg cgctcgtcgt gcggcggcgc ctcgacgcgc tcgacttggt ctctgtgctg
     1861 aaagctaggg aatgaacatg actcgcgtga aaatgcgacg gacactttgg gctggcatcg
     1921 gcgcgttgct gctcgtgctc gcgggctggc tgttgcgccc cgaaccccta atggtcgaag
     1981 cggcgcccgt cacgcgtggc ttgctcaggg caacggtaac cggcgaaggc cgcacacgcg
     2041 tgaaagcgct ctacaccgtc accgcgccgg tcgacggcga gctcgagcga atcacgctgg
     2101 atcccggcgc cgcgctcgcg acggacaccg tcgtcgcgcg gattcgcccc gcagcgtcgc
     2161 gccctctcga cgccaggagc cgcgccgaag cagccgctgc ggtcgtcgcc gcacgcgagg
     2221 cggtttcacg tgccgaggcg gctgaacgcg aggccagcgt ggcggtcgaa catgctgaca
     2281 gcaagctcgc gagaagtcag aaactcgccc aaaccgacgc tgtcccccaa gcggagctcg
     2341 agcacgcggg ccacgagatg ctcatggcga aggccactct cgaaagcggg caggcagcgg
     2401 tccgggaggc acgggctgat ctcgcccggg cgacggccgt cattacgcct acgtccggcg
     2461 ccaggggcgc tgctttcgag gtgaaatcac cagccacggg gaaggttctg cgtgttctcc
     2521 acgagagcgc agggcccatc gcggccggaa cgccgctcct cgaaatcggc gacgtgagcg
     2581 ccctcgaaat caactcggat ctactttcga gcgatgccgc caccgtcagg cccggggcca
     2641 ccgctacgat ctcgggatgg ggtggccagc cgttctccgc gcgcgtccgc cgagtcgacc
     2701 ccgccgggtt caccaaagtc tctgccctcg gcctcgaaga gcagcgcgct cgcgtcgttc
     2761 tcgaactcac ggatccgccg ccgcggggcc tcgggcatga ctatcgcgtc gacgtggcga
     2821 tcgtcgtgtg ggagggcaag gacgtgctgc ggatccctac gacagcgctc tttcgcgtgg
     2881 gtaaggactg ggcaacattt gccattcgcg acggcttcgc gcggctcacc aaggtcgaga
     2941 ccggcccctc agacgcgagc ttaactgtcg tgaagagcgc gctcgcgccc ggtgagaacg
     3001 tgattccgca gccttcggac gcaatcaagg agggcatgcg tgtgagggta ctgcgcgagc
     3061 tcacgcctta gcgctcggcg tgcggcgggg ctcatggggc gactcaatga gccccgttgc
     3121 tggcttccga cgactgaat
//
LOCUS       DATIML010000377         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4698292, whole genome shotgun sequence.
ACCESSION   DATIML010000377 DATIML010000000
VERSION     DATIML010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4698292"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..792)
                     /locus_tag="VLJ38_06480"
     CDS             complement(<1..792)
                     /locus_tag="VLJ38_06480"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU39191.1"
                     /translation="MTRTLYLVPSGHEVGLTSIALGLVRALDKRGTRVAFYKPIGQAA
                     AEDAGPERSTYFVRHTSSIEPAEPIALDEAEGLMAAGRSDELLERVMRGYHASSTGAD
                     VVVVEGLVDSQESSGESELNRELVRTLSAEVILAAALGDLPLAELEVRLERAASRYGG
                     FSPGHVIGTILNRVRTEGPSRPSLYGSVGTPARSLDPVRFDVLGVIPENPELLACRTV
                     DIARHLHADIIHEGEIMERRVRRISLLARTIPNLLDEVSAGTLLVT"
     gene            complement(789..1982)
                     /locus_tag="VLJ38_06485"
     CDS             complement(789..1982)
                     /locus_tag="VLJ38_06485"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HSU39192.1"
                     /translation="MPEANVLVVNCGSSSLRFALVEPESGKVVRHGMAERLGTDAGFF
                     RVDDGAEEALPPGAGHGEVLDQVLRRLDAARVLGVGHRVVHGGEAFSDSVVLDAAAIH
                     AIEACSELAPLHNPANLRGILAARERFPNVPHVAVFDTAFHQTLPRKAHLYAIPYELY
                     ERHRLRRYGFHGTSHRYVAGVAATRLGKPLAELELVTAHLGNGCSAAAVSGGHSVDTT
                     MGLTPLEGLVMGTRSGDVDPNLHEFLVQHAGLSLPDVMELLNRKSGLLGLSGSSNDMR
                     TLLAARDQGDERAALAIEVFCYRLAKAVLALGAALPRIDALVFTGGIGEHAASVRAET
                     LAALRLLGAAVDPELNAAHGLASNGRITRADSRLVALVVPTNEELVIARETARLVQAP
                     RAVAR"
     gene            complement(2029..>2483)
                     /locus_tag="VLJ38_06490"
     CDS             complement(2029..>2483)
                     /locus_tag="VLJ38_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSU39193.1"
                     /translation="FLVAKSTHEIYARLEVQTSEAGKGPARASFGLILLQIVALDLVF
                     SLDSVITAVGMAQSLGVMMAAVVIAVVLMLVFAGAISDFVNRHPSMKILALSFLLLIG
                     VMLVAEGLGQHISKAYIYFAMAFSLVVELLNIRLRKRPPAPLAPGDST"
BASE COUNT          430 a          825 c          863 g          365 t
ORIGIN      
        1 cgtgacgagc agcgtgccgg cgctcacctc gtcgagcagg ttcgggatgg tgcgcgcgag
       61 gagcgaaatg cggcgcacgc gccgctccat gatctcacct tcgtggatga tgtcggcgtg
      121 caggtggcgc gcgatgtcga cggtgcgaca cgccaagagt tcggggtttt ccgggatcac
      181 gccgagcacg tcgaagcgca cggggtcgag gctccgcgca ggcgtgccga ccgagccgta
      241 gagactcgga cgactcggtc cttcggtccg cacgcgattg aggatcgtgc cgatcacgtg
      301 accgggcgaa aacccgccat agcggctggc tgcacgttcg agccgaactt cgagctccgc
      361 gagcggcaag tcgccgagcg ccgcggccaa gatcacctcg gcgctcagcg tgcgcacgag
      421 ctcgcgattg agctcgcttt cgcccgaaga ctcttgcgaa tcgacgaggc cctcgaccac
      481 gacgacgtcg gcgcccgtcg atgacgcgtg gtagccgcgc atgacgcgct cgagcagctc
      541 gtcactccgt ccggcggcca tcaggccctc ggcttcgtcg agcgcaatcg gttcggctgg
      601 ctcgatggag ctcgtgtggc gcacgaaata cgtcgagcgc tcagggccgg cgtcctcggc
      661 ggcggcctgg ccgatcggct tgtaaaacgc gacgcgcgtg ccgcgcttgt cgagcgcgcg
      721 cacgagcccg agcgcgatcg aggtgagccc gacttcgtgc ccgctcggca cgaggtacag
      781 cgtgcgcgtc atcgagccac cgccctcgga gcctggacga ggcgcgcggt ctcgcgcgcg
      841 atgacgagct cctcgttcgt ggggacgacc agcgcgacga gccgcgaatc ggcgcgcgtg
      901 atgcggccgt tgctcgcaag gccgtgggcg gcgttgagct cggggtcgac cgccgcgccg
      961 agcaggcgca aagcagccaa ggtctcggcg cgcacgctcg cggcgtgctc gccgatgccg
     1021 cccgtgaaca cgagcgcgtc gatgcgcggg agcgccgcgc cgagcgcgag cacggccttg
     1081 gcgaggcgat agcaaaacac ctcgatcgcg agggctgcgc gctcgtcgcc ttggtcgcgt
     1141 gcggcgagca gcgtgcgcat gtcgttactc gagcccgaga ggccgagcag gccgctcttg
     1201 cgattgagca gttccatcac gtccggcagc gacaagccgg cgtgctggac cagaaattcg
     1261 tggaggttcg gatcgacgtc gcccgagcgc gtgcccatga cgagaccctc gagcggcgtg
     1321 agtcccatcg tcgtatcgac gctgtggccg ccgctcacgg ccgcggcgct gcagccgttg
     1381 ccgaggtgcg ccgtgacgag ctcgagctcg gcgagcggct tgccgaggcg ggttgcggcg
     1441 acgccggcga cgtagcggtg gctcgtgccg tgaaagccgt aacggcgaag gcgatgtcgc
     1501 tcgtaaagct cgtacggaat ggcgtagaga tgcgccttgc gcggcagcgt ctggtgaaac
     1561 gccgtatcga agacagcgac gtgcggcacg ttcgggaaac gctcgcgtgc ggcgaggatg
     1621 ccgcgcagat tcgcggggtt gtgcagcgga gcgagctcgg agcacgcttc gatcgcgtga
     1681 atggcggccg cgtcgagcac gacgctgtcc gaaaacgctt cgccgccgtg cacgacgcga
     1741 tgcccgaccc cgagcacccg cgcggcgtcc aaacgcctga gcacctggtc gagcacctcg
     1801 ccgtgaccgg cgccgggcgg cagcgcctct tccgctccgt catccacccg aaaaaaaccg
     1861 gcgtccgtgc cgaggcgctc ggccatgcca tggcgcacga ccttgccgct ctccggctcg
     1921 accaacgcaa agcgcaggga cgaactcccg caattgacga ccaaaacgtt cgcttccggc
     1981 atgcgcccta tccggcacgc ataccacaaa ggcgcctttg acccgcgctc aagtggagtc
     2041 gccgggagcg agcggcgctg gcgggcgctt gcgaagccta atgttgagga gctcgaccac
     2101 gagcgaaaag gccatcgcaa agtagatgta cgccttgctg atgtgctggc ccaagccttc
     2161 ggccacgagc atgacgccga tgagcaacaa gaaactcagc gccaagatct tcatgctcgg
     2221 gtgccgattg acgaaatcgc tgatcgctcc ggcgaagacg agcatcaaca ccaccgcgat
     2281 cacgaccgcc gccatcatca cgccgagcga ctgggccatg ccgacggccg tgatcacgga
     2341 gtcgagcgag aacaccaggt cgagcgcgac gatttgcagg agaatcagcc cgaaggacgc
     2401 gcgagccggg cccttgcccg cttcgctcgt ttggacctcg agccgcgcat agatttcgtg
     2461 tgtcgatttg gcgacgagga acg
//
LOCUS       DATIML010000378         4942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_364706, whole genome shotgun sequence.
ACCESSION   DATIML010000378 DATIML010000000
VERSION     DATIML010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4942
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364706"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..758)
                     /locus_tag="VLJ38_06495"
     CDS             complement(<1..758)
                     /locus_tag="VLJ38_06495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide reductase N-terminal alpha
                     domain-containing protein"
                     /protein_id="HSU39194.1"
                     /translation="MTFESALQKDDLWSSDVVTTKPSAAVSPRTAMKVRKRNGSTEPV
                     DLNKIVRAVSRSASGLEDVDPMRVATKTISGLYDGATTLELDQLSIQTAASLIAEEPE
                     YGKLAARLLATYIDKEVRGQEIQAFSQSIARGAELGLINPRLCAFVARSARKLNEAAM
                     RRSDEFEYFGLRTLYDRYLLRHPTTRLVLETPEQFFMRVACALSETVFEALELFRLLS
                     GLEYLPSSPTLFNAGTRHEQLSSCFLLDSPLDDLS"
     regulatory      complement(869..1077)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            1210..1668
                     /locus_tag="VLJ38_06500"
     CDS             1210..1668
                     /locus_tag="VLJ38_06500"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheW domain-containing protein"
                     /protein_id="HSU39195.1"
                     /translation="MREEARKPLLSVHAGGHHAGIPLASVREIMRPLPIASVAGAPPF
                     VLGLAVIRGVSVAVVDLGALLGEAGERMPFGRFVRLELGARSIALAVQAVTGLVEVTA
                     ASVAAMPPLLSRAAGKLVERLALEDGELLLVLETARLVAELPALQAEASA"
     gene            1665..3197
                     /locus_tag="VLJ38_06505"
     CDS             1665..3197
                     /locus_tag="VLJ38_06505"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HSU39196.1"
                     /translation="MTLVTPARELERLKFRLSELIGFAFEGGRLEHLEHVARTRADEL
                     RLDGIGAYVERLRLPDFQREELPELAEALTVTETFFYRNADQIQALVEEVLPARARRG
                     GQRLRILCAGCASGEEPYSLAIALKENVPELDDWNVQILGVDVNRAMLAKAARARYSP
                     WSLRATPDAIRERYFERAGSEFVLDPSVAKMVTFRAQNVAEHDPLFFRALACDVIFCR
                     NVIMYFTPEGMSRAIRHLTEALLPGGFLFLGHAETLRGLSHDFHLCHTHNTFYYQRRE
                     SIPPAPRSTRRPPPAPELSALPTAVDTTASWFEAIQRASLRVAELTHGDARSATPAGP
                     SSAAAPSTTHSELGDVLELVQRERFAEARSLLERLPARASEQPDALLFSAVLFTNEGR
                     LAEAERACEALLGADELNAGAHYVKALCREHAGDLDGAIEHDRMAVHLDSSFAMPHLH
                     AGLLARRGGDATGARRELAEALVLLEREDPSRLVLFGGGFSRSALTLLCRTELEKLEG
                     SV"
     gene            3197..3745
                     /locus_tag="VLJ38_06510"
     CDS             3197..3745
                     /locus_tag="VLJ38_06510"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSU39197.1"
                     /translation="MAELGSETLRPDLTAETLRSEFDRSFALPLVETAPDTVDLVAIR
                     IADRAYALASAELGGLMAARRLMPLPSPDPALGGLVGLRGALVAAFDLGVLLGLRASA
                     VPTRWLALSARDRQLALSFDELDGYLRVPRSALCATETREGELVERVLVDESCHRPVA
                     GVDKIAEFLSRRASSARSGKAG"
     gene            3748..>4942
                     /locus_tag="VLJ38_06515"
     CDS             3748..>4942
                     /locus_tag="VLJ38_06515"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE3 domain-containing protein"
                     /protein_id="HSU39198.1"
                     /translation="MGGSWTFGRRLGFGYALAAVTLLLVALFGYQTTEHLVENDHSVT
                     HTTLVRESIARLFAGVVEAESGQRGFVITGREDFLEPYTRAMSEIERNYNDLRALVAD
                     NPAQMRRAEAIHALIAKRDTELKEVIGLKRTGGVDQAAKFITAGEGLRTMQELRAAVR
                     DMDRVEEELLVQRREEAETSSARTRAVILWGSMLGTSFVALVGWLIARTLARQISSVV
                     RNVQSSSAELQSAANQQVTSAKEQATAMNEISTTTSELLATARQIAESSRRVSRVAGD
                     TATAARGGDQTVERTSQAIANIQRQVDLIVSHMLDLGKKSQQIGLFLDLINELAEQTN
                     ILAINATIEAAGAGENGKRFAVVAEEIRRLADRVGVSTKEIRQLIEDIRSAVNKTVMT
                     TETGNK"
BASE COUNT          801 a         1679 c         1657 g          805 t
ORIGIN      
        1 gagagatcgt cgagcggcga atccagcaag aagcagctcg aaagctgctc atgacgcgtg
       61 ccggcgttga agagcgtcgg cgagctcggc aggtactcga gccccgagag aagccggaag
      121 agctcgagcg cctcgaacac cgtctcggac agcgcgcagg cgacgcgcat gaagaattgc
      181 tcgggcgtct cgagcacgag ccgcgtcgtc gggtggcgca agagatagcg gtcgtagagt
      241 gtgcgcaggc cgaagtactc gaattcgtcg ctgcggcgca tcgccgcttc gttgagcttt
      301 ctcgccgagc gcgcgacgaa cgcgcacaag cgcgggttga tgagcccgag ctcggcgccg
      361 cgcgcgatcg actgcgaaaa ggcctgaatt tcctgcccac gcacctcttt gtcgatgtag
      421 gtcgcgagca ggcgcgccgc gagcttgccg tactcgggct cttcggcgat gagcgaggcg
      481 gcggtctgga tcgagagctg atcgagctcg agcgtcgtcg cgccgtcgta gagcccgctg
      541 atcgtcttgg tagcgacgcg catggggtcc acgtcctcga gccccgacgc cgagcggctg
      601 acggcgcgca cgatcttgtt caaatcgacg ggttccgtcg aaccgttacg ctttcgaacc
      661 ttcatggcag tgcgcggcga gaccgcagcg ctgggtttgg tggtgacgac atcggacgac
      721 cacaggtcgt ccttctgcag ggcactttcg aacgtcatgg ctcggctcct ctcggtgagc
      781 gggaccagcc cgctcgcgtt aggcacacgt ctcccgggtg ccgacctacc gcctacccac
      841 gaggctcgag gtcaaacggc ccgtttcagt cccggcgccg tgtgctggca ggtcttcggg
      901 ctccgcgagc tctgccggct ttcgccgggt tcctactgtc caccgcttcc cgtacccaaa
      961 agggccagtg cgccagtgga ggtcgttctc gcttaccgct gcggggcagc cccggaatta
     1021 caccgggttc cctttagcct gggcagaggc ccaggcacca acacggcgag caacatacgg
     1081 tgcacggctg cgcagtgtca agcacgccgg cttcgcgaag agcgcgtcta ggctttgccc
     1141 tcgtagagcg cccggcgtta tgatcactag ctcgggcgcg cgtgcgtcgc gttcgaaggg
     1201 cgagtgtcga tgagggaaga ggcgcggaaa ccattgctct ccgtccatgc tggcggtcac
     1261 cacgcgggaa ttccgctcgc gagtgtccgc gaaatcatgc ggccactgcc gatcgcgagc
     1321 gtcgcgggcg ctcctccatt cgtgctcggg ctcgccgtga ttcgtggcgt ttcggtcgcg
     1381 gtcgtcgatc tgggagcctt gctcggtgaa gccggcgaac gcatgccgtt cgggcgtttc
     1441 gtacggctcg agctcggcgc gcgctcgatt gcgctcgccg tgcaagccgt cacgggcctc
     1501 gtcgaggtga cggctgcatc ggtcgcagcg atgcccccgc tcttgagccg cgccgcgggc
     1561 aagctcgtcg agaggctcgc gctcgaggac ggcgagctgt tgctcgtgct cgagacggcg
     1621 cggctcgtgg ccgagctgcc tgccctgcag gccgaggcat cggcgtgacg ctcgtgacac
     1681 cggcgcgcga gctcgagcgg ctcaagttca ggctgagcga gctcatcggc ttcgccttcg
     1741 agggcggtcg actcgagcac ctcgagcacg tggcgcgcac gcgtgcggac gagctccggc
     1801 tcgacggcat cggcgcctac gtcgaacgct tgcggctgcc tgattttcag cgcgaagagc
     1861 tgcccgagct cgccgaagcg ctcaccgtca cggaaacgtt tttctaccga aatgccgacc
     1921 agatccaggc actggtcgag gaggtgttgc ccgcgcgcgc acgacgaggc gggcagcggc
     1981 tccgcatcct atgcgccggg tgcgcgtccg gcgaagagcc ttactcgctc gccatcgcgc
     2041 tgaaagaaaa cgtgccggag ctcgacgact ggaacgttca aatcctgggc gtggacgtga
     2101 accgcgccat gttggccaaa gccgcgcggg cccgctactc gccctggtcg ctccgcgcga
     2161 cgcccgacgc gatccgcgag cgttacttcg agcgcgccgg cagcgagttc gtgctcgatc
     2221 cgagcgtcgc gaagatggtg acgtttcgcg cgcaaaatgt cgccgagcac gacccgctgt
     2281 ttttccgtgc cctcgcctgc gacgtgatct tttgccggaa cgtgatcatg tacttcacgc
     2341 ccgaaggcat gagccgcgcc atccggcatc tcacggaggc gctcttgccc ggcggcttct
     2401 tgttcctcgg ccacgccgag acgctgcgcg ggctctcgca cgattttcat ctctgccaca
     2461 cgcacaacac gttttattac cagcgccgcg aatcgattcc gcccgcgcct cgcagcacga
     2521 ggcgcccgcc cccggcgccc gagctctccg cgctgccgac ggcggtcgat accacggcct
     2581 cctggttcga ggcgattcag cgcgcctcgc tgcgtgtcgc ggagctcacg cacggcgacg
     2641 ctcggtccgc cacgccggct gggccgagca gcgccgcagc accgagcacg acccactcgg
     2701 agctaggtga cgtgctcgag ctcgtgcagc gcgagcgttt cgccgaggcc cgcagcttgc
     2761 tcgaacggct ccccgcgcgg gcgagtgagc agccggacgc ccttctattt tccgccgtgc
     2821 tgttcacgaa cgaaggacgc ctcgccgagg ccgaacgcgc ctgcgaagcc ctgctcggcg
     2881 ccgacgagct caacgcgggc gcgcactacg tgaaggcgct ctgccgggaa cacgccggcg
     2941 acctcgacgg agccatcgag cacgatcgca tggcggtgca cctcgactcg agcttcgcca
     3001 tgccgcacct gcacgcgggc ctgctcgccc ggcgcggagg agacgcgacc ggtgctcgcc
     3061 gcgagctcgc cgaggcgctc gtgctgctcg aacgcgaaga cccctcgcgc ctggtcttgt
     3121 tcggtggcgg cttttcccgc agcgcgctca cgctgctctg ccgcaccgag ctcgaaaagc
     3181 tcgaaggcag cgtctgatgg cggagctcgg cagcgagacg ctacgaccgg acctcaccgc
     3241 cgagacgcta cggagcgagt tcgatcgctc cttcgcgctg ccgctcgtcg agaccgcccc
     3301 tgacacggtc gacctcgtgg cgattcgcat cgccgaccga gcttacgcgc tcgcgagcgc
     3361 cgagctcggc ggcctcatgg ccgcgcgccg cctgatgccc ctgccgtcac ccgacccggc
     3421 gctcggcggt ctcgtcggcc tgcgcggcgc gctcgttgcg gctttcgacc tcggcgtgct
     3481 cctcggcctg cgcgcgagcg ccgtgcccac gcgctggctc gcgctctcag cgcgcgaccg
     3541 gcagctcgcg ctgtctttcg acgaactcga cggctacctc agggtgccgc gctcggcgct
     3601 ctgcgcgacc gaaacacgcg aaggcgagct cgtcgagcgg gtgctcgtcg acgaaagctg
     3661 ccacaggccc gtggccggcg tcgacaagat cgcggaattt ttgtcacggc gagcgagcag
     3721 cgcgcgctca ggaaaggctg ggtgaggatg ggcgggtcgt ggacgttcgg acgtaggctc
     3781 ggtttcggtt atgcgctcgc ggcggtcacg ctgctgctgg tcgccctgtt cggctatcag
     3841 accacggagc atttggtcga gaacgatcac tctgtcacgc atacgacgtt ggtgcgcgag
     3901 tccatcgcac ggctcttcgc gggcgtcgtc gaggcggaat ccggacagcg cggtttcgtc
     3961 atcacgggac gggaggattt cctcgagcct tacacgcgcg ccatgagcga aatcgagcgc
     4021 aactacaacg acctgcgcgc gctggtcgcg gacaatcccg cccagatgcg ccgtgccgag
     4081 gccattcacg cgctgattgc caagcgcgac accgagctca aggaggtcat cggcctgaag
     4141 cgcaccggcg gcgtggatca agcggccaag ttcatcaccg caggcgaagg gctccgcacc
     4201 atgcaggagc tccgtgccgc ggtgcgcgat atggaccgcg tcgaggagga gctactcgtg
     4261 cagcgccgcg aggaggccga aacgagctcc gcgaggacgc gcgcagtcat tctttggggc
     4321 agcatgctcg ggacgagctt cgtagcgctc gtgggctggc tgatcgcgcg cacgctcgcg
     4381 cggcagatca gctcggtggt gcgaaacgtc cagagctcct cggcggagct gcaatccgcg
     4441 gccaatcagc aggtcacgag cgccaaggaa caggcgacgg ccatgaacga gatctcgacc
     4501 acgacgagcg agctactcgc gacggccagg cagatcgccg agagctcgcg ccgcgtctcg
     4561 cgcgtcgccg gggacaccgc cactgccgcc cgtggaggcg atcagaccgt cgagcgcacg
     4621 agtcaggcga tcgccaatat ccaacgccag gttgacctca tcgtgtcgca catgctcgat
     4681 ctcggcaaga agtctcaaca gatcgggctc tttctcgacc tcatcaacga gctcgccgaa
     4741 cagacgaaca ttctcgcgat caacgcgacg atcgaggctg caggagcggg cgaaaatggc
     4801 aagcgcttcg cggtcgtggc cgaggaaatt cggcgcctcg ccgaccgcgt cggcgtctcg
     4861 accaaggaga tccgccagct gatcgaggac atccgctcgg cggtgaacaa aaccgtgatg
     4921 acgacggaga ccggcaacaa gg
//
LOCUS       DATIML010000379         5497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_656192, whole genome shotgun sequence.
ACCESSION   DATIML010000379 DATIML010000000
VERSION     DATIML010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5497
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656192"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VLJ38_06520"
     CDS             complement(<1..495)
                     /locus_tag="VLJ38_06520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HSU39199.1"
                     /translation="MDPADLVHPGDLRAFASGKRHTPHALLGAHRAELYGTHGVIVRA
                     YHADAVGCELLRQGAEPVGMLPLGEGVFAVFVAGADVPLAYRVRFHFEGGATWERDDP
                     YRFLPTLGELDQYLIGEGTHRRLWQVLGSHVRTIDGTRGTAFAVWAPNAASVSLVGDF
                     NRWDG"
     gene            complement(495..2597)
                     /gene="glgX"
                     /locus_tag="VLJ38_06525"
     CDS             complement(495..2597)
                     /gene="glgX"
                     /locus_tag="VLJ38_06525"
                     /inference="COORDINATES: protein motif:HMM:TIGR02100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HSU39200.1"
                     /translation="MPQPLGATWDGQGVNFALFSQHATAVELCLFESQGSTTESIRIP
                     IKERSNRVWHVYLPDAMPGQLYGYRVHGPFMPSEGHRFNPNKLLIDPYARAIAGEIRC
                     PDETFGYPIGAPDDLVMSTDDSAAVAAKSVVVEQAFSWGDDRPPRVPWSRTIVYECHV
                     GGLTRTHPDVPGHLRGTYLGLASDAMIDHLRSLSVTAVELLPVHHAVSERRLLEAGMR
                     NYWGYNTLGFFAPDPHFATGCLGQQVTEFKTMVKTLHRAGLEVLLDVVYNHTGEGNQF
                     GPTLSLRGIDNQSYYRLDAHDRRYYVDYTGCGNSLNTVHPRTLQLVLDSLRYWVEEMH
                     VDGFRFDLATTLARDPYEFDAFSRFFAMVQQDPTLSRVKLIAEPWDLGPGGYRLGGFP
                     PGWAEWNARYRDCVRRFWRGDEGQVPELASRLSGSSDIFHGGGDRGPFASINFVTCHD
                     GFTLEDLVSYDHKHNDANGEENRDGTNENFSRNWGVEGETTSAPVLRMRERMRKNFLA
                     TLAFSQGVPMLSHGDEVARTQRGNNNAYCQDNPLAWLDWDIGPAEEELLAFTREVFAI
                     TRKNPVFRRRRFFSGGPVGDGHQKDVSWVRPSGGEMTMEDWSDPKTQCLGMLIHGEAS
                     DDVDERGRPNRGLTLLLLLNASTKAVHYGLPKLEERGHWHEAANTAQSAGRAPRRVPR
                     TGVNVAPHSLVLLWYEVG"
     gene            complement(3047..4006)
                     /locus_tag="VLJ38_06530"
     CDS             complement(3047..4006)
                     /locus_tag="VLJ38_06530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39201.1"
                     /translation="MSDDSRQDAPDEAGHEVPDEEQAELARLLLRSAKLDVPSDAARE
                     RILARGLDALGERPHRRVGRTFAATAVVLAAAAGIAFSVHRSGSKPAEVAAERVSATG
                     TTPRTPALPASSAPAPQPCVELVIAKGDAPLIEDFEQDDSWVLAADGRKGSWITYDDG
                     TGKQVPPSRSALFPSRIPGGRAASKRGLHVSGSRFSQWGVTFGTELADAACYDASAYA
                     GIEFWAKGPGQIRVGLQMIDVQDVKYGGLCQTDCYDTHRKIVDLSPTFRKYVVRWEEL
                     RQLYAARVPVAFDPRRVRFLEFGIAPESTPFDVWLDDVAFVRR"
     gene            complement(4003..4629)
                     /locus_tag="VLJ38_06535"
     CDS             complement(4003..4629)
                     /locus_tag="VLJ38_06535"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39202.1"
                     /translation="MLTITALPTGPGGLRPAKPLSRMADDDVSPKGRARDARFREVVD
                     QHFEFVWRSVRRLGVPPADADDAAQEVFLVTAKNLDNIPVDRERAFLFGTALRVASTR
                     RRSARRRPEELEAASDDRAGAALDPEELAELSRARPLLQEILDGMNDELRAVFILAEV
                     EELSVREIAELLDVPQGTVSSRLRSARDKFQAGIKRLQARAAFAWRKR"
     gene            complement(4769..>5497)
                     /locus_tag="VLJ38_06540"
     CDS             complement(4769..>5497)
                     /locus_tag="VLJ38_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39203.1"
                     /translation="PFELGSAWSGPRTARGNVAIAARGERALVFARGDESACIDANRH
                     GCFGFDFHELLPDRAEKSGLPMTVPVPFADDSVELVVAGSRFHYGVCTDTGERPVTTM
                     FTIERDPDYARADPLLEGCKPAGTFVWQRAAWLVAECEGGRRAVRLGARDDSAEYLDL
                     RALRLECKNGLATIRAPSLDLTLDEPRSGLTPLLPLDLAPPGARAVWAGRALIVATSF
                     ADRLRLARYACAGDKLAVQTLDVR"
BASE COUNT          930 a         1837 c         1863 g          867 t
ORIGIN      
        1 gccgtcccac cgattgaagt cgccgacgag gctcacgctc gccgcgttcg gcgcccacac
       61 ggcaaacgcc gtgccccgcg tgccgtcgat cgtgcgcacg tgcgagccga gcacctgcca
      121 caagcgccgg tgcgtgccct caccgatgag gtattgatcg agctcgccga gcgtcggcaa
      181 gaaacgataa ggatcgtcgc gctcccaggt cgcgccgcct tcgaaatgga agcgcacgcg
      241 gtacgcgagc gggacgtccg caccggcgac gaacacggcg aacacaccct caccgagcgg
      301 cagcatgccc acgggctctg caccttgacg caagagctcg cagccgacgg catcggcgtg
      361 atacgcgcgc acgatcacgc cgtgcgtgcc gtaaagctcc gcccggtgag cgccgagcaa
      421 cgcgtgcggc gtatgccgtt ttccgctggc gaaggcccgc aggtcccctg ggtgcacgag
      481 atcggccgga tccatcaacc cacctcgtac cacaacagca cgagcgaatg cggagcgacg
      541 ttcacaccgg ttctcggcac acgccgcggc gcgcgtccgg ccgactgggc ggtattcgcg
      601 gcttcgtgcc agtgcccgcg ttcctcgagc ttcggcaaac cgtagtgcac cgccttcgtg
      661 ctcgcgttca agagtaggag tagcgtaagg ccccgattgg ggcgtccccg ctcgtccacg
      721 tcgtcggatg cctcaccgtg gatcagcatg ccgaggcact gagtcttggg gtcgctccag
      781 tcctccatcg tcatctcgcc gccgctcgga cgaacccacg agacgtcttt ttggtgaccg
      841 tcgccgacgg gaccgccgct gaagaagcgg cgccggcgaa agaccgggtt tttgcgcgtg
      901 atggcgaaga cttcgcgcgt gaacgcgagc agctcttctt ccgcaggacc gatgtcccag
      961 tcgagccagg cgagcggatt gtcctggcag taagcgttat tgttgccgcg ctgcgtgcgt
     1021 gcgacctcgt cgccgtgcga gagcatggga acaccctgcg agaaggcgag tgtggcgagg
     1081 aagtttttgc gcatgcgttc gcgcatccgc aacacgggtg ccgacgtcgt ctcgccctcg
     1141 actccccagt tgcgactgaa gttctcgttg gtgccgtcgc ggttttcttc cccgttcgcg
     1201 tcgttgtgct tgtgatcgta cgagacgagg tcctcgagcg tgaagccgtc gtggcacgtc
     1261 acgaagttga tgctcgcgaa cgggccccga tcaccgccgc cgtggaagat gtcgctcgag
     1321 ccggacagac gcgaagcgag ctccggcacc tggccttcgt cgccacgcca aaagcggcgc
     1381 acacagtcgc gatagcgcgc gttccattcc gcccaacccg gcggaaatcc tcccaaacga
     1441 tagccgcccg gcccgagatc ccagggctcg gcgatgagct tcacgcgcga caacgtcgga
     1501 tcctgctgca ccatggcgaa gaagcgcgaa aacgcgtcga attcgtacgg atcacgcgca
     1561 agcgtggtcg cgagatcgaa gcggaaaccg tcgacgtgca tctcctcgac ccagtagcgc
     1621 agactgtcga gcacgagctg cagcgtgcgc gggtgcaccg tgttcaggct gttgccgcag
     1681 cccgtgtaat cgacgtaata gcgccgatcg tgcgcgtcga gccggtagta cgactgattg
     1741 tcgatgccgc gcagactcag cgtggggccg aattggttgc cttcgcccgt gtggttgtag
     1801 acgacgtcga gcagcacctc gagacccgcg cgatgcaggg tcttcaccat ggtcttgaac
     1861 tcggtgacct gttggccgag acagccggtc gcaaagtgcg gatcgggcgc gaaaaagccg
     1921 agcgtgttgt agccccagta gttgcgcatg ccggcttcga gcaggcggcg ctcggagacg
     1981 gcgtggtgca ccggcaagag ctcgacggcc gtcaccgaga gcgagcgcag gtgatcgatc
     2041 atggcgtccg aggcgagacc gagataggtg ccgcgcaaat gccccggcac gtcggggtgc
     2101 gtgcgcgtga gtccgcccac gtggcactcg tagacgatgg tgcggctcca cggcacgcgc
     2161 ggcgggcgat cgtcgcccca gctgaacgcc tgttcgacga cgaccgactt cgccgccacg
     2221 gcggcgctgt cgtccgtgct catcacgaga tcgtccggtg cgccgatggg ataaccgaaa
     2281 gtctcgtcgg ggcagcggat ctcgcccgcg atcgctcgcg cgtacggatc gatcaagagc
     2341 ttgttcggat tgaagcggtg accctcgctc ggcatgaacg ggccgtggac gcgatagccg
     2401 tagagctggc cgggcatcgc gtccggcaag tacacgtgcc agacgcggtt cgagcgttcc
     2461 ttgatcggga tgcggatcga ctccgtggtc gagccctgtg actcgaacag gcagagctcg
     2521 accgccgtcg cgtgttggga gaagagggcg aagttgacgc cctggccgtc ccaggtggcg
     2581 ccgagtggtt ggggcacgcc gggtcgcgtc cgcatgaaag cgcgcgatag taacacccgt
     2641 cccgcacccg cagggaagcc gtagcctcga gttgagcgat cttggaagac cagatcgcga
     2701 tcggcacgag tggtcaagcg ccacgtgaaa aaccggcgag accggcgcgt tgtgggtcag
     2761 tgctcggcaa cggacgctgg actttgagcg aggtcgccgt gctaccatca accaaaaaag
     2821 tccgcggcag ggcttcccat cgcctcacac gagcgcggcg acggagccga ccggcgagcc
     2881 acaatgcgcc ggccccgccg gttctcgcgt atgtttcggc ttccttgacg atcgtgatct
     2941 ttcctgccaa gaccgcccga cgcgagccgc gctcggcgcg ccgcggctca cggtcgcgcg
     3001 ccggcccgcg gttccccgcg aagttcagcg ccgatcgcgg cgaagttcag cgtcgaacga
     3061 aggcgacgtc atcgagccag acgtcgaacg gcgtgctctc gggcgcgatc ccgaactcga
     3121 gaaagcgcac gcgccgggga tcgaatgcga ctggaacgcg cgcggcgtag agctgccgca
     3181 gctcctccca gcggacgacg tatttccgaa acgtcggcga caggtcgacg attttgcggt
     3241 gcgtgtcgta gcagtcggtc tggcacaggc cgccgtactt cacgtcctgc acgtcgatca
     3301 tctgcaagcc cacgcggatt tgtcccgggc ccttggccca gaactcgatg cctgcgtaag
     3361 cggacgcgtc gtaacacgcc gcgtcggcga gctcggtgcc gaaggtgaca ccccactggc
     3421 tgaagcgact gcccgagacg tgcaagccgc gcttgctcgc cgcgcgtccg cccggaatgc
     3481 gactcggaaa cagcgccgag cggctcggcg gcacctgctt gccggtgccg tcgtcgtacg
     3541 tgatccaact ccctttgcgg ccgtcggccg cgagcaccca cgaatcgtct tgctcgaaat
     3601 cttcgatcag cggcgcgtcc cccttggcga tcacgagctc gacgcacggc tgcggcgccg
     3661 gtgccgagga cgcgggcagc gccggagtcc gcggcgtggt cccggtggcg ctcacgcgct
     3721 cggcggcgac ttcggcaggt tttgacccgc tgcggtgcac ggaaaacgcg atccccgccg
     3781 cagccgcgag cacgacggcg gtggcggcaa aggttcgacc aacgcgacgg tgcggacgtt
     3841 ctccgagtgc gtcgagtccg cgcgcaagaa tgcgctccct cgcggcatcg gacggcacgt
     3901 cgagcttcgc cgacctcaaa agcaaccgcg cgagctcggc ctgctcttcg tcgggtacct
     3961 cgtgtccggc ctcgtccggc gcgtcctggc gggagtcgtc gctcatcgct tcctccacgc
     4021 gaatgccgcg cgggcctgca gacgcttgat accggcctgg aatttgtcgc gcgcgctgcg
     4081 caagcgcgag ctcacggtac cctgcggcac gtccaagagc tcggcgatct cacgcaccga
     4141 gagctcctcc acttcggcca ggatgaacac ggcgcgtagc tcgtcgttca tcccgtcgag
     4201 gatctcctgc aacaggggcc gcgcgcgcga aagctccgcc agctcttcgg gatcgagggc
     4261 ggcgccagca cgatcgtcgc ttgcagcttc gagttcctcc ggccggcggc gagcgctacg
     4321 acgcctggtc gaggcgacgc gcagcgccgt gccgaagaga aacgcccgct cgcggtccac
     4381 ggggatgttg tccaggttct tcgccgtgac gaggaacact tcctgggcgg cgtcatccgc
     4441 gtcggcgggc gggacgccga ggcgccgcac gctccgccac acgaattcga agtgttggtc
     4501 tacgacctcg cgaaaacgcg cgtcgcgcgc gcggcccttc ggagagacat cgtcgtcggc
     4561 catacggctc agcggcttcg ccgggcggag cccgcccggt ccggtcggca gggccgtgat
     4621 cgtgagcaca ttgacctcat ggacggcgta ccggaaaccg atcgaaaaat cgtgctccct
     4681 tggtcgaatc ctagactgaa tggaagaaaa cgggcgttcg gctcggcggc cgctcgcttc
     4741 agcgtgctcg ggtgaaggtt ggtcgcgctc agcgcacgtc gagcgtctgc acggcgagct
     4801 tatcgccggc gcaggcataa cgagcgagcc gcagacggtc ggcgaagctc gtcgcgacga
     4861 tgagggcgcg ccctgcccaa accgcacgcg cgccgggggg tgcgaggtcg agcgggagca
     4921 gcggtgtgag gccggagcgc ggctcgtcga gggtcaagtc gagactcgga gcgcgaatgg
     4981 tcgcgagccc atttttgcat tcgagccgaa gcgcgcgcag atcgaggtac tcggcggaat
     5041 cgtcgcgcgc cccgagccgc accgcgcgcc ggccgccttc gcactctgca acgagccaag
     5101 ccgcgcgctg ccacacgaag gtgccggcag gcttgcagcc ctcgagcagc gggtcggcgc
     5161 gcgcgtagtc ggggtcgcgt tcgatcgtga acatggtcgt cacggggcgt tcgccggtat
     5221 ccgtgcagac gccgtagtga aagcgtgagc cggcgacgac tagctcgacc gaatcgtcgg
     5281 cgaacggcac ggggaccgtc atcggtagac cgcttttctc cgcgcgatcg ggcaaaagct
     5341 cgtgaaagtc gaagccgaag cagccgtgtc gattggcatc gatgcacgcc gactcgtccc
     5401 cacgcgcgaa gacgagggcg cgctcgcccc gcgcggcgat ggcgacgttg ccgcgcgccg
     5461 tgcgcgggcc actccacgcc gagccgagct cgaacgg
//
LOCUS       DATIML010000380         2790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_942397, whole genome shotgun sequence.
ACCESSION   DATIML010000380 DATIML010000000
VERSION     DATIML010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942397"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1752
                     /locus_tag="VLJ38_06545"
     CDS             <1..1752
                     /locus_tag="VLJ38_06545"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU39204.1"
                     /translation="PIAMNAMALSLNAEPSSAPAGAAEFVARARLAFQSGVFETAAEL
                     CRRALELDVRAAGAWHLLGILAAQLGKEDDALQLLGTAAGLGPNSVEHHNDFAVALKR
                     SGRLEEAKVSLERAIELAPTHVTARQNLASVQFELGKGARAARDHARAERHLATARRH
                     APDRLDIVRELAATLVDAGRPAEAVPLLEWARGVAPDDPAFACCHGAALRLAEEHERS
                     IEELRAATRRFPDIAAVWNDLGGSLQEQGVLTSDDALLDEADVAFGRAIALVPSDWRL
                     GFNLGLLRLMRGDFAGGLPHYEARFRDGSERLGAYPKPLWRGEPLEGRTVLLHAEQGL
                     GDTLQFVRYAACVRERGGYVVLQCQKPLRALLGGCKGVDTVVDEEAPLPPFDVHAPLL
                     SLPAIFGTTTGTIPNAVPYILPDPELVAAWRARVAERPGLRIGIAWQGNPDFSRDRLR
                     SVPLRHFEPLARIPGVTLYSLQWGAGREQLADFPASSGVIDAALPWSEAAALVSLLDL
                     VVTSDTSIAHLAGALGRPVWVALSANPDFRWQLRRSDCPWYPSMRLFRQPAPHDWPAV
                     FANMARELATMLQAPHS"
     gene            1771..2415
                     /locus_tag="VLJ38_06550"
     CDS             1771..2415
                     /locus_tag="VLJ38_06550"
                     /inference="COORDINATES: protein motif:HMM:NF023085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2589 domain-containing protein"
                     /protein_id="HSU39205.1"
                     /translation="MLGQGKELAAIDFEDLIGGPLMAAIKAQAKAAITTTNFIQSFAF
                     TQGSGGQQQLKVVSFDFGQVLDSTLIGQLSNMTVIKVPLLTIIPIPFIRIDSMTVDFN
                     VNLHSTSKTTMSNDFTFSLSASGSYMGIGLAASVSDRNTYQNESTVDDTYSMHVNVHA
                     VQDQMPGGMAQVLGIFSSIIQSQASLIQTIVTKQVEKLNDNANKALNPAPTPGP"
     gene            2419..>2790
                     /locus_tag="VLJ38_06555"
     CDS             2419..>2790
                     /locus_tag="VLJ38_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39206.1"
                     /translation="MGAWIKVGPGELVDRLTILELKRDRINDPLKVARAREQLGAVTD
                     ALRAEPGLADRRVRELVTMHAEELRSVNASLWDIEARLRACEDAGRFDVEFVELARSV
                     YRLNDRRAAAKARIDALCGSSI"
BASE COUNT          466 a          983 c          899 g          442 t
ORIGIN      
        1 ccgatcgcta tgaacgccat ggcgctatcg ctcaacgccg aaccgtcgtc cgcgccggcg
       61 ggcgccgccg agttcgtcgc gcgagcgcgc ttggcattcc aatccggcgt gttcgagacg
      121 gcggccgagc tctgccgccg ggcgctcgag ctcgacgtac gcgcggccgg cgcgtggcat
      181 ctgctcggca tactcgccgc ccagctcggc aaagaagacg acgccttgca gctgctcggg
      241 acggctgccg ggctcggccc gaacagcgtc gagcatcaca atgatttcgc ggtcgcgctc
      301 aaacgaagcg ggcgcctcga ggaggcgaag gtgtccctcg agcgcgccat cgagctcgct
      361 ccgacacacg ttactgcgcg ccagaacctc gcgagcgtgc agttcgagct cggtaagggc
      421 gcgcgggcgg cgcgcgacca tgcacgggcc gagcgccacc tcgcgacggc gcgccgccac
      481 gcgcccgatc ggctcgacat cgtgcgcgag ctcgcggcca cgctggtcga cgcgggccgc
      541 cccgccgaag cagtgccgct gctcgaatgg gctcgcggcg tcgcgcccga cgatccggcg
      601 ttcgcctgct gccacggcgc ggccctccgc ctggccgaag agcacgagcg ctcgattgag
      661 gaactccggg cggccacacg ccgttttcca gacatcgcgg ccgtatggaa cgatctcgga
      721 gggtcgctcc aggagcaggg cgtcctcacg agcgacgacg cgttgctcga cgaagcggac
      781 gtcgcgttcg ggcgcgctat tgcgctcgtt ccctccgact ggcggctcgg cttcaacctc
      841 ggactgctgc ggctgatgcg cggtgatttc gcgggcggct tgccgcacta cgaagcgcgc
      901 tttcgcgatg gcagcgagcg gctcggcgcg tacccgaagc cgctctggcg cggagaaccg
      961 ctggagggcc gaaccgtctt gctgcatgcc gagcaggggc tcggcgatac gctccagttc
     1021 gtgcgctacg cggcgtgtgt gcgggagcgc ggcgggtacg tcgtgctcca gtgccagaag
     1081 ccgctgcgag ccctgctcgg cggctgcaag ggtgtggata ccgtcgtcga cgaggaggcg
     1141 ccgctaccac ctttcgacgt gcacgcgccg ctcctcagtc taccggcgat cttcgggacg
     1201 accaccggca cgatcccgaa cgccgtccct tacatcttgc ccgatcccga gctcgtcgcg
     1261 gcctggcgcg cacgcgtggc ggaacgtcca ggcttacgca tcggtatcgc ctggcagggt
     1321 aaccccgact tctcgcgcga tcgactgcgc tcggtgccgc tccgccactt cgagccgctc
     1381 gcgcgcattc cgggcgtgac gctctacagc ctgcagtggg gggcgggccg cgaacagctc
     1441 gccgatttcc cagcgagcag cggcgtcatc gatgcggcgc tgccgtggtc cgaggcggcc
     1501 gcgctcgtct cgctgctcga cctcgtcgtg acctccgaca cgtcgattgc ccacctcgca
     1561 ggcgcgctcg ggcggccggt gtgggtcgcg ctcagcgcca atccggattt tcgctggcaa
     1621 ctccgccgct cggactgccc ctggtacccg agtatgcgcc tattccgcca gccggcgccg
     1681 cacgactggc ccgccgtctt cgccaacatg gcgcgcgagc tcgcgacgat gcttcaagcc
     1741 ccgcattcat gaacacagaa acgaggaacc atgctcggtc aaggtaaaga actcgcagca
     1801 atcgatttcg aggatctgat cggcggtccg ctgatggcgg cgatcaaggc gcaagccaag
     1861 gcagccatca cgaccacgaa cttcattcaa tctttcgcgt tcacgcaggg gtcgggcggc
     1921 caacagcaac tcaaggtcgt gagcttcgat ttcggccaag tgctcgactc gaccctgata
     1981 ggccagctca gcaacatgac ggtcatcaag gtgccgttgc tgaccatcat tccgatcccg
     2041 ttcatccgta tcgacagcat gacggtcgac ttcaacgtga accttcacag cacgtcgaag
     2101 acgacgatgt cgaacgattt cacgttcagc ctgagtgcca gcggctctta catggggatc
     2161 ggccttgcgg cgtcggtgag cgaccgcaac acctatcaga acgagagcac tgtcgacgac
     2221 acctacagca tgcacgtgaa cgtgcacgcg gtgcaggacc agatgcccgg cggcatggcg
     2281 caagtgctcg gcatcttctc aagcatcatc cagtcgcaag cttcgctcat ccaaaccatc
     2341 gtcaccaagc aggtcgagaa gctcaacgac aacgccaaca aggcgctcaa tcccgcgccg
     2401 accccgggac cctgaagcat gggcgcctgg atcaaggtcg gaccgggcga gctcgtcgac
     2461 cggctcacga tcctcgagct caagcgcgac cgcatcaacg acccgctgaa ggtcgcgcga
     2521 gcacgcgagc agctcggagc cgtgaccgac gcgctccgcg cggaacccgg gctcgcggac
     2581 cgccgggtgc gggagctcgt cacgatgcac gccgaagagc tccgctccgt caacgcttcg
     2641 ctctgggata tcgaagcgcg cctccgcgcg tgcgaagatg cgggccgctt cgacgtcgag
     2701 ttcgtagagc tcgcgcgctc ggtctatcga ctcaacgacc ggcgcgccgc cgccaaggcc
     2761 cgcatcgacg cgctctgcgg ttcttcgatc
//
LOCUS       DATIML010000381         8132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_657415, whole genome shotgun sequence.
ACCESSION   DATIML010000381 DATIML010000000
VERSION     DATIML010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8132
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_657415"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2345)
                     /locus_tag="VLJ38_06560"
     CDS             complement(<1..2345)
                     /locus_tag="VLJ38_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39207.1"
                     /translation="MPWLTVTTPHYHVHFHAGIEEVAQRVASVAEDVYERLAPELGHR
                     PSERTEIVLTDGTEEANGQAYALPYPTVNLNVSAPDDMSTLADYDDWITELVTHELTH
                     ILHMTNVSGVPNVVNHVIGPTLAPNQVEPHWILEGLAVAMESEHTSGGRLRSTQFDMM
                     LRADVLENRTATLDEISHSPRRWPSGALWYLYGAKFVEWIASIYGPDVYAAVATDYGA
                     TIVPFGVNRAIRRATGRTYEELYAGWLLDLKRRYGAERDAVLRAGLREGARLTFRGWQ
                     ALDPRFLPPSCHAPGTLAYVRADADTLGGIYTLALPRAGRAPEEELVARASGRSLAYG
                     PDCSLYFDNQVPSRRKYPFGDLFRLPPGETSPSGLDRKRQRLTLGRRTRDVDVSSDGR
                     RIVYVTNDRGTTTLRVAELTPDGAVTNERRLVPSARFEQAYTPRVSPDGTRVAYSTWT
                     AGGYRDLRVVDVASGHFFELWHDRALDQQPAWSHDGQTLFFSSDRGGISNIYGYELAT
                     GALWQVTNVVTGAYMPEPSPDGRTLVYVGYGAEGFDLFALPLQRARWTPAEKPTGDRP
                     RPSVLPLQTWPVAPYRALPTLAPRALTFGYGSGTFGEAITIGTTGSDAIGRHAFAAQL
                     VFETRYADFLGSLDYAYYALPFAFNASLFRSAAPRTDYRATGTPQQVVEHRTGVTTGV
                     DLPLPGDFDAQDVALSYTLLDWDHNQPLGSSLDPYALLPTEPDRGILAVVHLGYQLST
                     ASSTGYAISAEHGLTLGVGADFADPAWGSESTLIAFSGTLTG"
     gene            complement(2493..3362)
                     /locus_tag="VLJ38_06565"
     CDS             complement(2493..3362)
                     /locus_tag="VLJ38_06565"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU39208.1"
                     /translation="MAQGLQALQGPGVPEQVLKAADPVAQAMSALHRVETSRGGPGSD
                     AAGALVQVRRALSDLQAAPVRHTAADQATEAIASALSLVHQLTAALGQGSVVPSPPTQ
                     PSGAFQAPGELPPQVAVVNASAQRSAPPPNASPPAQPAPNWGQKTAPVGQVWQAPAPG
                     QAAPPPAAASPAPGASTGGALRYEAELGAHSSTNFYKGLSGNDVVDSGGIFIATYNIP
                     DVGQPLAVKVCLPGGYEFEAAAVVRWTRDSPQSGPDSSPGFGAQFTQISAEGRQLVYR
                     YVRNREPLFYDDL"
     gene            complement(3446..4387)
                     /locus_tag="VLJ38_06570"
     CDS             complement(3446..4387)
                     /locus_tag="VLJ38_06570"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HSU39209.1"
                     /translation="MTLRIAYFGLPLAAWLLARDGHDVRFAVLAPVDAPGRRRLTRTI
                     GAERVLGAKVLGSRLNARVEAAFAHETPDLIVSWFWTRKLPSAWLERTRYGGIGAHPS
                     LLPRHRGPNPYFAAIDAGDRETGVTVHTLSAEYDEGDILSARSISIGERDSWQLARAL
                     DRPSLALLREVTAAYAKGEPPRPVAQRAELVTWAPEPSGEQLRVNWTWTTERILRRIH
                     ALSPVPGLALDVEGLELVVTRAEQAAQFPAALEPGEAAVHGGPPTLVLRTGDGAVAVQ
                     RAVLEGNGTGSDQLLGRERLAAVVREHLSHRNTGRLS"
     gene            4460..4915
                     /locus_tag="VLJ38_06575"
     CDS             4460..4915
                     /locus_tag="VLJ38_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39210.1"
                     /translation="MVRWASAPWLLAAAVLGLGGLAMAQDGLIVDPWRHPSATPFGER
                     AKSPAPGVPAARRLATPAARKTGPTIVPLGPPLALHTNPGAVVPLGPAGHEDIVDPWT
                     PTFTAVAHPAPLTAAHRNWSWEIQEIVDPWRRGALAVATDPAIVDPWAP"
     gene            5004..5816
                     /gene="ftsE"
                     /locus_tag="VLJ38_06580"
     CDS             5004..5816
                     /gene="ftsE"
                     /locus_tag="VLJ38_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HSU39211.1"
                     /translation="MDAGGDRRAFRPALRAGARFDPLAAGRPVLVFEGVHKAYRADAP
                     VLRGLSLEIARGEFVFITGNSGAGKSTLLRLLYAEESVDAGRILFLGREIARLTPSSI
                     PYLRRNLGIVFQDFRLVENWSVLDNVALPLEVLGLPARTIRQRVGAVLERVGLSGRGH
                     ERAGHLSGGEQQRVAIARAIVSEPALLLADEPTGNLDPQLALDILGLLEDINETGVTV
                     LFATHDRTLLDVRPRRVVVLDEGRAFDAPQGLDEEAKLASLDGPLPTRGAAA"
     gene            5813..6682
                     /locus_tag="VLJ38_06585"
     CDS             5813..6682
                     /locus_tag="VLJ38_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HSU39212.1"
                     /translation="MSALERAVRGAKNDLRLHALGVFSVAVAFLCLGATLLAVVNVDH
                     ARQRWASLGRASVYLTPRASKEQVAAIERALRASEGVTTVRHVTAEDARRDAAEVGKD
                     ALIDALPAEAFPESLEVSVQKDVRPERLEQLAAELRALPAVESVETYGSWSERIESLL
                     AGGVAAATILALVVLAAVVSVVSSTIRLSLQRRKLEVEVLKLVGATEGYVREPFVIEG
                     AAQGALGASFAIVLLGVLYLVVQSHLDQRLVALFGSAPTFLPWPLVLVTVVLGAVLGA
                     LAAFWSLRRFVTT"
     gene            6679..7638
                     /locus_tag="VLJ38_06590"
     CDS             6679..7638
                     /locus_tag="VLJ38_06590"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSU39213.1"
                     /translation="MMLARSRLARLFVPAAVLALSPVLHADAGAPHAQAASADEVARV
                     RQSIARDEEALRRHSDELRREATSADARILARGRSYVRLSRAGLLPVGDGFEALVEHA
                     VRLERLHHALETDVATAKRLAAERVAVSKELAAVRARGSTLDDEQRVLARAETALRAA
                     DERESAFAQAFESSSHTAVYGAVGPAEPGARASGFAELKGRLPFPIAGRSEIRPARRA
                     SSDGPGLEMRAAPGAAVRSVAAGRVAFADTYADYGKTVIIDHGRHFYTLSANLGAIDV
                     AVGDEVGAGERIGSVADTGSGPRLYFEVRVGKDTVDPASWFGL"
BASE COUNT         1218 a         2808 c         2832 g         1274 t
ORIGIN      
        1 cccgtgagcg tgccgctgaa cgcgatcagc gtcgattcgc tgccccaggc ggggtcggcg
       61 aagtccgcac ccacgccgag ggtgagtccg tgctccgcgc tgatggcgta gcccgtcgag
      121 ctcgccgtcg agagttggta accgagatgg accacggcca aaatcccgcg gtccggctcc
      181 gtcggcagga gcgcgtaggg atcgagcgac gagccgagcg gctgattgtg atcccaatcg
      241 agcagcgtgt acgagagcgc gacgtcctgc gcgtcgaagt cgcctgggag gggtagatcg
      301 acgccggtcg tgacgcccgt gcggtgttcg acgacttgct ggggggttcc cgtcgcgcgg
      361 tagtcggtgc gcggagccgc agaacgaaag agcgacgcgt tgaacgcgaa gggcagcgcg
      421 taatacgcgt aatcgagcga ccccaagaaa tcggcatagc gtgtctcgaa cacgagctgt
      481 gccgcgaagg cgtggcggcc gatcgcgtcg ctgccggtcg ttccgatggt gatggcctcg
      541 ccgaaggtgc cggagccata gccgaacgtg agcgcgcgcg gcgcgagcgt cgggagcgcg
      601 cgatacggcg ctaccggcca ggtttggagc ggcagtacgg agggtcgcgg cctatcaccc
      661 gtcggcttct ccgcgggcgt ccaccgtgca cgctggaggg ggagcgcaaa gagatcgaag
      721 ccctccgcgc cgtagccgac gtacacgagc gtgcggccgt caggcgacgg ctcgggcatg
      781 tacgcgcccg tcacgacgtt cgtcacctgc caaagcgcgc ccgtcgcgag ctcatagccg
      841 taaatattcg agatgccgcc gcgatccgac gagaagaaca gcgtctgtcc gtcgtgcgac
      901 caagccggct gctgatcgag ggcgcggtcg tgccagagct cgaaaaaatg gccgctcgcg
      961 acgtcgacga cgcgcagatc gcggtagccg cccgccgtcc acgtgctgta cgcgacgcgc
     1021 gtcccgtccg gggagacgcg cggcgtgtac gcttgttcga agcgcgcgct cgggacgaga
     1081 cgtcgctcgt tcgtgacggc gccgtccggc gtgagctccg caacgcgcag cgtggtcgtg
     1141 ccgcgatcgt tcgtcacgta cacgatgcgg cgcccgtcgg agctcacgtc gacgtcgcgc
     1201 gttcggcgcc cgagcgtcag ccgttgccgc ttgcgatcca ggccgctcgg cgacgtttcg
     1261 cccggcggaa gtcgaaacaa gtcaccgaac gggtacttcc ggcgcgaggg cacctggttg
     1321 tcgaagtaga gcgaacaatc cggcccgtac gcgaggctcc gtccactcgc gcgcgcgacg
     1381 agctcctctt cgggcgcacg ccctgcgcgc ggcagcgcca gcgtgtaaat cccgccgagc
     1441 gtgtccgcgt cggcgcgtac gtaagcgagc gtcccgggcg cgtggcagct cggcggcaag
     1501 aaacgcggat cgagtgcttg ccagccgcgg aaggtgagtc gcgcgccttc gcgtaaccca
     1561 gcgcgcaaaa cggcgtcgcg ctcggcgccg tagcgccgct tcagatccag cagccagccg
     1621 gcgtagagct cttcgtacgt gcgacccgtg gcgcgccgga tcgcgcggtt gacgccgaag
     1681 gggacgatcg tggcgccgta gtccgtggcg accgccgcgt acacgtccgg cccgtagatg
     1741 ctcgcgatcc actcgacgaa ttttgcgccg tagagatacc agagcgcgcc cgacggccag
     1801 cgccgcggcg agtgactgat ctcgtcgagc gtggcggtac ggttttcgag cacgtcggcg
     1861 cgcagcatca tgtcgaactg cgtcgaacgc agccgcccgc cgctcgtgtg ttcgctctcc
     1921 atcgccacgg cgagcccctc gaggatccaa tgcggctcga cttgattcgg cgcgagcgtc
     1981 ggaccgatca cgtgattgac gacgtttggg acgcccgaaa cgttcgtcat gtgcaggatg
     2041 tgcgtgagct cgtgcgtgac gagctcggtg atccagtcgt cgtagtcggc gagcgtcgac
     2101 atgtcgtcgg gggcgctcac gttgaggttg accgtcgggt agggcagcgc gtaggcctgg
     2161 ccgttggcct cttcggtgcc gtcggtgagc acgatttccg tgcgttcgga gggacggtgg
     2221 ccgagctcgg gggcgagccg ttcgtaaacg tcttcggcga cgctcgcgac gcgctgggcg
     2281 acctcctcga tgccggcatg aaaatggacg tggtaatgcg gcgtcgtcac cgtgagccac
     2341 ggcacccacg ggtcgttcgc gcgagccggt gtggtcagaa ggagcgttgc gatgaacgcg
     2401 acgacgagcc gcgcgaatct cggcgcgcgg cgctcacgct gccgtacggc cgacgagagc
     2461 gacagaaccc gagtcagagg gcgacgtcga gctcagaggt cgtcgtaaaa gagcggctcg
     2521 cgattgcgga cgtagcggta gacgagctgg cgtccctccg ccgagatctg cgtgaactgt
     2581 gcgccgaagc cgggcgagga gtcagggccc gactgcggtg agtctcgcgt ccagcgcacg
     2641 acggccgcgg cttcgaattc gtagccgccc ggtaagcaga ccttcacggc gagtggttgg
     2701 ccgacgtccg ggatgttgta cgtcgcgatg aagatgccgc cggagtcgac cacgtcgttg
     2761 ccactgaggc ccttgtagaa gttggtcgag ctgtgggcgc cgagctccgc ttcgtagcgg
     2821 agtgcgccgc ccgtcgaagc accaggcgca ggcgaggcag cggctggtgg tggcgcagcc
     2881 tggccgggtg ccggggcttg ccagacttgc cccacgggtg ccgtcttctg tccccagttt
     2941 ggcgccggct gcgcgggcgg actcgcattc ggcgggggcg ccgagcgctg tgccgacgcg
     3001 ttgacgactg cgacttgcgg cggaagctcg ccgggtgctt gaaacgcccc cgagggctgc
     3061 gtcggcggcg acggcacgac cgacccttgt ccgagcgccg cggtgagttg atgcacgagg
     3121 ctgagcgcgc tcgcgatcgc ttccgtcgcc tgatcggcgg ccgtgtgacg caccggtgca
     3181 gcttgcaggt ccgagagcgc ccggcgcact tgcacgagcg ctccggcggc gtcactgcct
     3241 ggtccaccgc gcgaggtctc gacgcggtgc aatgcactca tggcttgggc caccggatcg
     3301 gctgccttga gcacctgctc cggcaccccc gggccttgca gcgcctggag cccctgagcc
     3361 aacttctccc gagcggttcg cgccaacgtc acgacatcca tcgatgaaca ttccctccgc
     3421 gagaggtccg ccgcggagtc taacatcaac tcagccggcc cgtgttccga tgcgacaggt
     3481 gctcccggac cactgctgcg agccgttccc ggccgagtaa ctggtcggat ccggtgccat
     3541 ttccctcgag caccgcgcgc tgaacggcga cggcgccgtc gcccgtgcgc agtaccagcg
     3601 tcggcggacc gccgtgcacg gctgcctcgc ccggctcgag cgctgcggga aactgcgccg
     3661 cctgctcggc ccgggtgacg acgagctcga ggccctcgac gtcgagcgcg agtccgggga
     3721 cgggcgacag ggcatggatg cgacgcaaga ttcgttcggt cgtccaggtc cagttcacgc
     3781 gaagctgctc gccgctcggc tcgggcgccc acgtcacgag ctcggcacgt tgagccacgg
     3841 ggcgcggtgg ctcgcctttc gcgtaagcag ccgtcacctc gcgcaggagc gccagcgaag
     3901 gtcggtcgag cgcgcgcgcg agttgccaag aatcacgctc cccaatcgag atcgagcgcg
     3961 cgctcaggat gtcaccctcg tcgtactcgg cgctcaacgt gtgcaccgtg accccggtct
     4021 cgcggtcgcc cgcgtcgatg gcggcaaagt acggattcgg tccgcgatgg cgcggtaaga
     4081 gcgacggatg cgcgccgata ccgccgtaac gcgtgcgctc gagccacgca ctcgggagct
     4141 tgcgcgtcca aaaccaactc acgatcaaat cgggagtttc gtgggcgaac gcggcttcga
     4201 cgcgggcgtt caagcgcgat ccgagcacct ttgccccgag cacgcgttcg gcgccgatcg
     4261 tgcgagtgag gcgccgccgc ccaggagcat cgaccggcgc gagcacggcg aagcgcacgt
     4321 catgtccgtc gcgcgcgagc agccacgccg ccagaggtag gccaaagtaa gcgatccgga
     4381 gtgtcatagc gcctgcccgt cgtgcctggc gcgcgcatgc cgttgcgaaa cggcgagcgt
     4441 gggttcaaga tgagcgggca tggtgagatg ggcgtcggct ccctggcttt tggccgccgc
     4501 cgtgctcgga ctcgggggac ttgcgatggc gcaggacgga ctcatcgtcg atccttggcg
     4561 gcatcctagc gctacaccgt tcggcgagcg ggcgaagtcg cctgcccccg gtgttcccgc
     4621 ggcgcgacga ctcgcgacgc ccgctgcgcg caagactggt cccacgatcg tcccgctcgg
     4681 cccgccgctc gccctccaca ccaacccagg cgccgtcgtg cctctcggac cggcgggcca
     4741 cgaagacatc gtcgatccct ggacgccaac gttcacggcg gtcgcgcatc ccgcaccgct
     4801 caccgcagcg caccgcaact ggtcctggga aatccaagaa atcgtcgatc cctggaggcg
     4861 aggggcgctc gccgtggcga ccgaccccgc gatcgtcgat ccctgggcgc cctagtacta
     4921 cttcgccggt ctttggcggg agacccggcg gtcgcggccc cgaaaacttg gtccggggca
     4981 agcgtccctg ttaagcccat cacatggatg ctggcggcga caggcgcgcc tttcgcccgg
     5041 cccttcgcgc cggagctcgc ttcgacccgc tcgcggcggg gcggcctgtc ttggtcttcg
     5101 aaggcgtaca caaggcctac cgcgccgatg ctcccgtcct gcgcggcttg agcctcgaga
     5161 ttgcccgcgg cgagttcgtg ttcatcacgg gcaactcggg cgccggtaag agcacgctgc
     5221 tccgcctgct ctacgccgaa gaatccgtcg atgccggtcg catcttgttc ttgggccggg
     5281 aaatcgcgcg ccttaccccg agctcgattc cctacctgcg ccgaaacctc ggcatcgtct
     5341 ttcaggactt tcggctggtc gaaaactggt ccgtgctcga caacgtggcc ttgccgctcg
     5401 aggtgctcgg acttccggcg cgcacgattc ggcagcgggt gggcgccgtg ctcgagcggg
     5461 tcggcctctc gggccgcggt cacgaacgcg ccgggcacct ctcgggcggc gagcagcagc
     5521 gggtcgcgat cgcgcgcgcc atcgtgagcg agcctgcgct tttgctggcc gacgagccca
     5581 ccggtaacct cgatccgcag ctagccctcg acattctggg actgctcgaa gacatcaacg
     5641 agacgggggt caccgtgctg tttgcgacgc acgaccgcac gctcctcgac gtacgcccgc
     5701 gccgcgtcgt cgtcctcgac gagggccgcg ccttcgacgc gcctcagggt ctcgacgagg
     5761 aagcgaagct cgcgtcgctc gacggaccgc taccgacacg gggagccgcg gcgtgagcgc
     5821 cctcgaacgc gccgtacgcg gcgccaaaaa tgatctacgc ctgcacgcgc tcggcgtctt
     5881 ttccgtcgcc gtcgcgttcc tttgtttggg cgcgacgctg ctcgcggtgg tcaatgtaga
     5941 ccacgcgcgc cagcgctggg cgagcctcgg ccgggcgtcg gtgtacctca cgccgcgcgc
     6001 gagcaaggag caagtcgccg cgatcgagcg cgcgctccga gcgtcggagg gcgtcacgac
     6061 ggtgcggcac gtcacggcgg aagacgcgcg ccgcgacgcc gccgaggtcg gcaaagacgc
     6121 gctgatcgac gcgctgcccg ccgaagcttt ccccgaatca ctcgaggtga gcgtgcagaa
     6181 agacgtacgc cccgagcgcc tcgaacaact cgcggccgag ctccgcgcgc tgccggcggt
     6241 cgaaagcgtc gaaacctacg gcagttggag cgagcgcatc gagagcttgc tcgcgggcgg
     6301 agttgccgcg gcgacgattc tggcgctcgt cgtgctcgcg gcggtcgtga gcgtcgtctc
     6361 gtcgacgatt cggctgtcgc tccagcgccg caaactcgaa gtcgaggtgc tgaagctcgt
     6421 cggcgcgacc gaaggttacg tgcgcgagcc gttcgtgatc gagggcgccg cgcaaggcgc
     6481 gctcggtgca agcttcgcga tcgtgctgct cggggtgctc tatctcgtcg tgcagagcca
     6541 cctcgatcag cgcctggtcg cgctgttcgg ctcggcgccc acgttcttgc cttggccgct
     6601 cgtgctcgtg acggtcgtgc tcggcgcggt gctcggcgcg ctcgcggcgt tttggagcct
     6661 gcggcgcttc gtgaccacat gatgctcgcg cgctcgcgtc tcgcacggct cttcgtgcct
     6721 gcggcggttc tcgccctttc gcccgtgctc cacgccgacg cgggtgcgcc gcacgcgcaa
     6781 gcggcgtcag ccgacgaggt ggcacgcgtg cgtcagagca tcgcgcgcga cgaagaagcg
     6841 ctgcgccgtc actccgacga gctccggcgc gaggcgacga gcgccgacgc gcgcatcctc
     6901 gcgcgcggtc gcagttacgt ccgactgtcg cgcgccgggc tcttgccggt cggtgacggc
     6961 ttcgaggcgc tcgtcgaaca cgccgtgcgc ctcgagcggc tgcatcacgc gctcgagacc
     7021 gatgtcgcga cggccaagcg gctcgccgcc gaacgcgtcg ccgtgagcaa agagctcgcc
     7081 gccgttcgag cgcggggctc gacgctcgac gacgagcagc gcgtgctcgc gcgcgccgaa
     7141 accgcgctgc gcgccgccga cgaacgcgag agtgccttcg cgcaagcctt cgagagcagc
     7201 agccacacgg ccgtgtacgg cgccgtgggt cctgccgagc ccggcgcgcg cgcgagcggc
     7261 ttcgccgagc ttaagggccg gctgccgttt cccatcgcag ggcgcagcga aatccggccg
     7321 gcgcgccgcg cgagctccga cggccccggc ctcgaaatgc gcgccgctcc gggcgccgcc
     7381 gtacgcagcg tcgcggcagg acgcgtcgcg ttcgccgaca cgtacgccga ctacggtaag
     7441 accgtcatca tcgaccacgg ccgtcatttt tacacgctga gcgcgaacct cggcgctatc
     7501 gacgtagctg tcggcgacga agtgggtgcc ggcgaacgga tcggctcagt cgctgacacg
     7561 ggcagcggcc cgcgcctgta cttcgaagtt cgcgtcggca aagacacggt cgacccagcg
     7621 agctggttcg gtctgtaatt cttcgtcgcg gcaaaggaca cggcttggca cggacgtgag
     7681 ttggctttac gctgaagcct catgcacgag cgccgtctgg tgggatggtg gctagggatc
     7741 gctctgccgc tttttttggt ggaattgccg gcgtacgccc aatcgaccgc tgctttccca
     7801 tccgacacgc cgccgccgcg cacgcagccg aagccgccac cgccgccgcg cacgcagcca
     7861 gtgcccgccg ccagcacgaa accagtgccc gcggctcgcc cccctgcagc aactcctgcg
     7921 cagcgtccag cgcctgctcc cacgcaacca cctccggcag tcgtcgtgcc cccgcctgcc
     7981 aggacgacgc ccggcgccac cgctgccgac gtgcgcccgc ccgttcttcc ctattacgaa
     8041 ggcatgcccg ttccgcccgg ttacaaggtc gtcacccgcc aggccacggg cgtcatcacg
     8101 ggcggcgcgg tcgggttagc ggcgtcttac gc
//
LOCUS       DATIML010000382         3986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2386148, whole genome shotgun sequence.
ACCESSION   DATIML010000382 DATIML010000000
VERSION     DATIML010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3986
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2386148"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..865)
                     /locus_tag="VLJ38_06595"
     CDS             complement(<1..865)
                     /locus_tag="VLJ38_06595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39214.1"
                     /translation="MAALGVHGCNKQSVTVNLRSLQNSTEVTFVCRGKTDQGTDHGLA
                     LNECPDYEHDPPERTMYALLTQNTTNELAIVDMQIHEVVDVDPAVPSYTSLRLPSRPG
                     ALTTTPGGEASFVGLTTPGKTGITAIPTTCLGAPRSGQRARDLTTFAACSLPWAPGDM
                     AIVVEPPSADGTVYTTCDASEPQSPDAPPSADPTRDCVTNLAVEHGPPGRRKLVVALP
                     EKGQLAVIDAQQLLDQPQGSFAPCTIERLVDLNASPDPSGQQQVVPVDLEGGCSPNRP
                     ASPPLPPNAHSR"
     gene            complement(913..2586)
                     /locus_tag="VLJ38_06600"
     CDS             complement(913..2586)
                     /locus_tag="VLJ38_06600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39215.1"
                     /translation="MAQRSWLGLAFILSGCFLSGEGVSPPKDRTVYFPVGLALDSGAR
                     HLFIVNSDFDLQYNAGTVESWDLDALRARLPVACKSDADCDGGNVCDCADTVACGSQR
                     TSGVPSNWCVAPGTPKPCPFSRELSASERQLYPGRCFSINPLSTTGGTRAIHQASVEI
                     GAFATDVIYRARPASAAPDQPGRLFVPVRGDATLHWIDVDDDGNLYCGQSDPGADGAC
                     AHTHRRGDNPQAENTRGLAMLPEPFGLDATESGEWLMVSNQSSFATGLFHNAWTAGGG
                     YDNGPTYQYTIAGLSAQPIGVVAVPRSRASIAVKELELPEFLVGFRGAAQIDLLRVYP
                     DADSSPPRPYAKAPDASPILTNSNGGDSRGMAIDVSVRTRAEAICAARYGLSDDCASG
                     VSACEFPSGYVDCVQQAAAAPLDVLVTNRAPASLIVGETRQVISEAVSYDVPTFVATF
                     PLEFGAARVVTGEITNQQGELERRAFSVSFDSRRIDIFDLARGRVEAGVITGRGPQAM
                     VIDAEHALGYVAHFTDSYIGVVDLNQQHAQTYGVMIAMIETPAAPRASK"
     gene            complement(2668..2853)
                     /locus_tag="VLJ38_06605"
     CDS             complement(2668..2853)
                     /locus_tag="VLJ38_06605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39216.1"
                     /translation="MLPPFIIDQIRRREEEESRKHELEQPRLELPEDVYPSPRERRPS
                     EDRPEDEHKRGIVILEL"
     gene            3017..>3986
                     /locus_tag="VLJ38_06610"
     CDS             3017..>3986
                     /locus_tag="VLJ38_06610"
                     /inference="COORDINATES: protein motif:HMM:NF025617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HSU39217.1"
                     /translation="MDKSLCRSPAAGWRLVAERSGSMARRRLVRCGGKNWTLLAFAAI
                     LVVLFRPALAQAAFEVNDAEWQGTSELLEIARAELGRDHVEIVGTLDYGKLEPGDGVM
                     VLHPEVSIDPDEMGAFLAAGGRVALLDDRGRAPSFLNRYHIQRVEAPLRPAQVLRGNN
                     DLPIALPVLQEVAGQEQSRHPTMRDVDRIVTNHPTALTHQKLTPVLEIPALGEPNATL
                     AVTGVIEKRGRVFAMGDPSVLINLMLRYPGNRAFAKHLVEYLVDRDERPEHPGKLYIV
                     TNAFAQRGHYGGATGPLRELTDLASAVRDALRSAEDNGLSSTLAIVL"
BASE COUNT          634 a         1319 c         1390 g          643 t
ORIGIN      
        1 gccgcgaatg cgcgttgggc ggcagcggcg gcgaagcggg ccgattcgga ctgcagccgc
       61 cctcgagatc aaccggcacg acctgctgct gtccgctcgg gtcgggcgag gcgttcaggt
      121 cgacgagcct ctcgatcgtg cagggagcga agctgccctg cggctgatcg agcagctgct
      181 gggcgtcgat cacggccagc tggcccttct ccggcagcgc caccacgagc ttgcgccggc
      241 cgggcgggcc gtgctcgacc gctaggttcg tgacgcagtc acgcgtcgga tctgcgctgg
      301 gcggagcgtc ggggctctgg ggctcgctcg cgtcgcacgt cgtgtagacg gtgccgtccg
      361 cgctgggcgg ctcgaccacg atcgccatgt cccccggcgc ccacggcagc gagcaagccg
      421 cgaacgtcgt gaggtcgcgc gcgcgctggc cgctgcgcgg cgccccgagg cacgtggtcg
      481 ggatcgccgt gatgccggtc ttgcccggcg tcgtgaggcc gacgaagctc gcctcgccgc
      541 ccggcgtcgt cgtgagcgcg cccggtcggc ttggcagtcg caaggacgtg taactcggca
      601 cggccggatc gacgtcgacg acctcgtgga tctgcatatc gacgatcgca agctcattcg
      661 tcgtgttctg cgtcaggagc gcgtacatgg tgcgctcggg cgggtcgtgc tcgtaatcgg
      721 ggcactcgtt cagcgctagg ccgtggtcgg tgccttgatc cgtcttgccg cggcagacga
      781 aggtgacctc ggtgctgttt tgcagggagc gcaagttcac ggtgacggac tgcttgttgc
      841 agccgtggac accgagggcc gccacgacga cgccgaagca cgcaacgcca gcggaaagga
      901 atcgccgcat attcacttgg aagccctggg cgcggccggt gtttcgatca tcgcgatcat
      961 cacgccgtag gtctgtgcgt gctgctgatt gaggtcgacc acgccgatgt acgagtccgt
     1021 gaaatgcgcg acgtagccca acgcgtgctc cgcgtcgatc accatcgcct gcggcccgcg
     1081 gccggtgatg acgccggcct cgacgcgccc gcgcgccagg tcgaaaatat cgatgcggcg
     1141 cgagtcgaag ctcacgctga acgcgcggcg ttcgagctcg ccctgctgat tcgtgatctc
     1201 acccgtgacg acgcgcgcgg cgccgaactc gagcgggaac gtcgcgacga acgtcggaac
     1261 gtcgtagctc acggcctcgg agatgacctg gcgcgtctcg cccacgatga ggctagcggg
     1321 cgcgcggttc gtcacgagca cgtcgagtgg cgctgcggcc gcctgctgca cgcagtcgac
     1381 gtagccgctc ggaaattcgc aggcgctcac gccgctcgcg cagtcgtcgc tcagcccgta
     1441 gcgcgcggca cagatcgctt ccgctcgtgt tcgcaccgat acgtcgatcg ccatgccgcg
     1501 cgaatcaccg ccgttggagt tcgtgaggat ggggctagca tccggcgcct ttgcgtacgg
     1561 gcgcggcggc gaagagtcgg cgtcgggata cacgcgcaag agatcgatct gagcggcgcc
     1621 acggaagccg acgagaaact ccggcagctc gagctccttc accgcaatcg acgcgcgcga
     1681 acgtggcacg gccacgacgc cgatcggctg cgccgacagt cccgcgatcg tgtactgata
     1741 cgtcggaccg ttgtcgtaac cgccgcccgc ggtccaagca ttgtggaaga gcccggtcgc
     1801 gaacgaggac tggttcgaga ccatgagcca ctcgcccgac tcggtcgcgt cgaggccgaa
     1861 gggctcgggc agcatcgcga gaccgcgcgt attttccgcc tgtgggttgt cgccgcgccg
     1921 gtgagtgtgc gcgcaggcgc cgtcggcgcc ggggtcggat tgaccgcagt agaggttgcc
     1981 gtcgtcgtcc acgtcgatcc agtgcagcgt cgcgtcgccg cggacgggga cgaacaagcg
     2041 cccgggttga tccggcgccg cggaggccgg ccgcgcgcgg taaatcacgt cggttgcgaa
     2101 cgcgccgatt tcgacggagg cctgatgaat cgcgcgggtt ccgcccgtgg tgctcagcgg
     2161 attgatggag aagcaacgtc ccggatagag ctggcgctcg gacgcgctga gctcccgcga
     2221 gaacggacac ggcttgggtg tacccggcgc gacgcaccaa ttgctcggaa cgccgctcgt
     2281 ccgctgcgag ccgcacgcga cggtgtcagc gcagtcacac acgttgccgc cgtcacaatc
     2341 ggcgtcgctc ttgcaggcca cgggcaagcg ggcccggagc gcatcgaggt cccagctctc
     2401 gaccgtgccc gcgttgtatt ggagatcgaa atcgctattg acgatgaata ggtgccgggc
     2461 gccgctgtcg agcgcgaggc cgaccggaaa gtagaccgtg cgatccttgg gcggagagac
     2521 gccctcaccg gacaaaaagc atccgctgag gatgaaagcg aggccaagcc aggagcgctg
     2581 cgccatgcgg gcggcggagc gtagaggctc gaccccgctc gggcaacccg cttcgtcacg
     2641 gcgacttggc gcggtcgccg gatttggtca gagctcgagg atgacgatgc cgcgcttgtg
     2701 ctcgtcctcg gggcgatcct cggagggacg ccgctcacgc ggagaggggt acacgtcttc
     2761 cggcagctcg agacgaggct gctcgagctc gtgcttacgg ctctcttcct cttcgcgtcg
     2821 ccggatctgg tcgatgatga aggggggcag catgcctggg ttgccttggt gtccgccctg
     2881 ttacgggccg ctctatccaa tctagctagg gtatacgcct ggtcaagttc taacgaagag
     2941 ctttggccga cggaccggga acggcgcggc gctcactcga cctcgggctc gaccttcgcc
     3001 acataatacg gcctccgtgg acaaaagctt atgccgctcc cccgcagccg gatggcgcct
     3061 cgtcgccgag cgctcgggca gcatggcgcg gcgccgcttg gtgcgatgcg gcgggaaaaa
     3121 ctggacgctt ctagcgttcg ccgcgatttt ggtggtgctg ttccggccgg cgctggccca
     3181 ggcggcgttc gaggtcaatg acgccgagtg gcaaggcacg agcgagctcc tcgagattgc
     3241 gcgcgccgag cttggccgtg accatgtcga gatcgtcggt acgctcgact acgggaagct
     3301 cgaaccgggc gacggcgtca tggtgctgca ccccgaggtg tctatcgacc cggacgagat
     3361 gggggccttt ctcgcggcgg gcgggcgcgt cgcgctgctc gacgatcgcg gacgcgcgcc
     3421 gagctttttg aaccgctatc acatccaacg cgtcgaagcc ccgcttcggc ccgcccaggt
     3481 actgcgcggc aacaacgatc tgcccatcgc gctgcccgtg ctgcaggaag tggcagggca
     3541 agagcaaagc cggcacccga cgatgcgcga cgtcgaccgg atcgtcacga accatccgac
     3601 ggccctgacg catcagaagc tcacgcccgt cctcgaaata ccggcgctcg gcgagccgaa
     3661 cgccacgctc gccgtcactg gagtgattga gaagcgcggg cgcgtgttcg ccatgggcga
     3721 cccctcggtg ctcatcaacc tgatgctccg ctacccgggg aatcgcgctt tcgccaagca
     3781 cctggtcgaa tacctggtcg accgcgatga acgccccgag cacccgggca agctctacat
     3841 cgtgacgaac gcgttcgcgc agcgcggcca ttacgggggc gcgacgggac ctttgcgcga
     3901 gctcacggac ctcgcgagcg ccgtacgcga cgcgctgcgc tcggccgagg acaacgggct
     3961 ctcgagcacc ctcgcgatcg tgctcg
//
LOCUS       DATIML010000383         2324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2386285, whole genome shotgun sequence.
ACCESSION   DATIML010000383 DATIML010000000
VERSION     DATIML010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2386285"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..1541
                     /locus_tag="VLJ38_06615"
     CDS             192..1541
                     /locus_tag="VLJ38_06615"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HSU39218.1"
                     /translation="MSASLAPFVPLLNASGQELKRPKRLLLVFTPDGSADSDTAAGPI
                     DWKPQGTETDFTLHPIQDPLTPFKSKLIVPWGLKMSAKGAGEQHAYGSAGMWTGSLLK
                     DPGNGADFDGGNGHRTGWGSGPSVDQILAANAGPGLPYAVTPDAAVQETPYRTLELGV
                     QCGNPTSVTRTIYKADDTPLHPETDPQAAFDRLFGTFMPDTQAADAAQKKKEQQSILD
                     LVTADLNRLKTRVSSEEYPKIEAHLAGIRALEQRLETMTPVANAACTAPDRPASSGKY
                     ANNANFPAEVGAVLGMIPHIFACDLTRIASVQLSCGFSNVTHTWLGHTDAHHTMSHQN
                     VDNRDKLVAIDHWYAQQLAAMLQALDAIDEGDGTLLDNTLVVWGRELGTTSHAMQPWP
                     TLLVGGAQGALRTGRFLDVSKQPSACLLVSILQAMGLQGTTSIGNIDADSGPLSALA"
     gene            complement(1599..2006)
                     /locus_tag="VLJ38_06620"
     CDS             complement(1599..2006)
                     /locus_tag="VLJ38_06620"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HSU39219.1"
                     /translation="MNASEGAVRTNWLKRRLRSFIFAGRGVWLLRTEPNARIHLLSTA
                     FALITGTALGLSGLEWALIVVAVALVLTAEALNTAVERLADALMPNHHPLVGSAKDLG
                     AGAVLIAAVGAAVIGVLVLGPHLLRLYATFFHG"
BASE COUNT          418 a          821 c          743 g          342 t
ORIGIN      
        1 gacggcttcg ccgcctccgg ctacgacgtg cgcgcgctca tcaccacgct cgtcctgagc
       61 gacgccttcc gccacgtgcg cgccatcggc gcgaaggaca tgccctaagt tcaacttcga
      121 gagccctccc agccatgccg catttccctc gccgagcctt ctcccgtcgc gcgctattga
      181 agacgctcgg cgtgagcgcg tcgctcgcgc cgttcgtgcc gctgctcaac gcgagcggcc
      241 aagagctgaa gcgccccaag cgcctcctgc tcgtgttcac gcccgacggc agcgccgact
      301 ccgacactgc ggcaggtccc atcgattgga agccgcaagg caccgagacc gacttcacgc
      361 tccacccgat tcaagatccg ctcactccct tcaaatcgaa gctcatcgtg ccgtggggcc
      421 tcaaaatgag cgcgaaaggc gcgggtgagc agcatgctta cggctcggcc ggcatgtgga
      481 ccggttcgtt gctcaaagat ccggggaacg gcgccgattt cgacggcggc aacggccacc
      541 gcaccggctg gggcagcggt ccctccgtgg accaaatcct cgcggccaat gcggggccgg
      601 gcctgccgta cgcggtgacg ccggacgcgg ccgtgcagga gacgccgtac cgcacgctcg
      661 agctcggcgt gcaatgcggc aacccgacga gcgtgacgcg caccatctac aaggccgacg
      721 acacgccgct tcacccggaa acggatccgc aagccgcgtt cgatcgcctg ttcggaacct
      781 tcatgccgga cacgcaagcc gccgatgccg cgcaaaagaa gaaagaacaa cagagcatcc
      841 tcgacctcgt cacggcggat ttgaatcgcc tgaagacgcg cgtgagctcg gaggagtacc
      901 cgaaaatcga agcgcacctc gccggcatcc gcgccctcga gcaacggctc gagacgatga
      961 cgcccgtcgc gaacgccgct tgcacggcgc ccgaccggcc cgcgtcgagc ggcaagtacg
     1021 cgaacaacgc gaacttcccc gcggaagtcg gcgcggtgct cggcatgatc ccgcacattt
     1081 tcgcctgcga tctcacacgc atcgccagcg tccagctctc gtgcggcttc agcaacgtca
     1141 cgcacacctg gctcggccac accgacgcgc accacaccat gtcgcaccag aacgtcgaca
     1201 atcgcgacaa gctcgtcgcc atcgaccact ggtacgcgca gcagctcgcc gccatgctgc
     1261 aagcgctcga cgccatcgac gaaggcgacg gcaccttgct cgacaacacg ctcgtcgtgt
     1321 ggggtcgcga gctcggcacg acgtcgcacg ccatgcagcc gtggcccacg ctgctcgtcg
     1381 gtggcgcgca gggtgcgctg cgcaccggcc gttttctcga cgtgagcaag cagccgagcg
     1441 cctgtctgct ggtgtcgatt ttgcaggcca tgggcctgca gggcacgacc agcatcggca
     1501 acatcgacgc cgactccggg ccgctcagcg cgctcgcttg acggtccgtg ccggcacgtc
     1561 ccggaacgca catccggacc gtcgtactgg tgcggcgttc agccgtgaaa gaacgtcgcg
     1621 tacaagcgca ggaggtgcgg tccgagcacg agcacgccga tgaccgcggc accgaccgcc
     1681 gcgatgagca cggcgccggc acccagatct ttcgcgctgc cgacgagcgg atgatggttc
     1741 ggcatcagcg cgtccgccag gcgttcgacg gcggtgttca gggcttccgc cgtgagcacg
     1801 agcgcgacgg caaccacgat cagggcccac tcgaggcccg agagcccgag cgccgtgccc
     1861 gtgatgagag cgaacgccgt cgacagcagg tgaatgcgcg cgttcggttc ggtgcggagc
     1921 agccagacac cccggccagc aaaaatgaag ctccgcaggc ggcgcttcag ccaattcgtt
     1981 cgaacggctc cctcgctcgc gttcatcctc gggacgatag cgctagcgcg cccaccggtt
     2041 tggcgaagcg aacgcccagc gtcgcccggt gcatgggagg gcatcgagga cagggcggta
     2101 gcgcttgttg cgtggaccgt cgcggcacgg cgaacggtat cgaggacaag gcggaagcgc
     2161 ttgttgcggg caccgccgcg acgaggggga cgggcctggt gagtcgctcc tagtttccga
     2221 tttgccttga cagagttcgt ggcgcttgca ttcgcgagct tgcccacgag tcgaaatgta
     2281 gcgcgcccgg cacgcagcgg gcgcgctgct gagctcttgc tctg
//
LOCUS       DATIML010000384         2533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3254290, whole genome shotgun sequence.
ACCESSION   DATIML010000384 DATIML010000000
VERSION     DATIML010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3254290"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1149)
                     /locus_tag="VLJ38_06625"
     CDS             complement(<1..1149)
                     /locus_tag="VLJ38_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU39220.1"
                     /translation="MRVLVADRLSEDALDEMRALGVEVDYEPKLSGPELPARLGGINV
                     LIVRGTPVSAAALAAGKSLNLVIRAGAGTQNIDVAFASERGIYIATTPGKNARAVAEL
                     AFTLIGCLDRRVPDAINGLRAGRWEKDEYARAIGLEGRTLGILGFGHAGRIMAELARA
                     YGMRPITYGRSLTLVRAAELGVRRVDSAIDLARESDVLSVHLELSERTRGFVDRAILS
                     ALPDGASFVNTARPELVDYDALLELIPKKSLRVGLDVLPGEPSERTARYEHPLLRAGL
                     VYATPHIGASTDRAQTAIASETVRILRSFVTKGEVPNVVNIAQNTWSRYQLVVRHVDQ
                     VGALANVLAVLKRHGIHISELDNTVFEGGHAACAKIRLESRPSDGCLQE"
     gene            complement(1244..1744)
                     /locus_tag="VLJ38_06630"
     CDS             complement(1244..1744)
                     /locus_tag="VLJ38_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39221.1"
                     /translation="MARPADHPDFYRLPPPPGRTRESGIRLDAEGRFFQHQEPFQHGG
                     MSRAFASWISRHPDDGRYILTNGYDWSYFEVEDVPFFVERVLAAPDGPRLVLSDGSEE
                     PLDPTTLAVGEGERLYVKVKHGAFDARFRQAAQIALGPWLEAEPDGSPALVIHGARYR
                     PAPYRP"
     gene            complement(1766..2221)
                     /locus_tag="VLJ38_06635"
     CDS             complement(1766..2221)
                     /locus_tag="VLJ38_06635"
                     /inference="COORDINATES: protein motif:HMM:NF017434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK/LysX family protein"
                     /protein_id="HSU39222.1"
                     /translation="MNQARRAALHAAGPHGAPGALWTIGAVELVTLVDFGLERLPARV
                     DTGARTSALHVEGLTELGNGRVRFELGAGAHAAIEAVVTRRARVRSTSGKLESRPFVT
                     ALARLGDLEARIEVGLVDRAAMHYRMLLGRSALAGRFVVDVSRRYLLGG"
     gene            complement(2218..>2533)
                     /locus_tag="VLJ38_06640"
     CDS             complement(2218..>2533)
                     /locus_tag="VLJ38_06640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD-dependent epimerase/dehydratase"
                     /protein_id="HSU39223.1"
                     /translation="FCFVDDLIEGFMRVSRLEKLDGPMNLGHPGEFTIADLANHVVEL
                     TKSGSKIEYRPLPADDPKQRRPDITKAQRLIHFQPKIDLRQGLQRTIDNFRERLAQRA
                     NA"
BASE COUNT          402 a          840 c          906 g          385 t
ORIGIN      
        1 ctcttgcagg caaccgtccg acggccgcga ctcgagacgg atcttggcgc acgcggcgtg
       61 accgccctcg aacaccgtgt tgtcgagctc gctgatgtga atgccgtggc gtttgagcac
      121 ggcgagcacg ttggcgagcg cgcccacttg gtccacgtgg cgcacgacga gctgataacg
      181 cgaccaagtg ttctgcgcga tgttgacgac gttcggcacc tcgcccttcg tgacgaagct
      241 ccggaggatg cgcaccgttt cgctggcgat cgccgtttgc gcgcgatccg tggaggcgcc
      301 gatgtgcggc gtcgcgtaca cgaggccggc gcgcaggagc gggtgctcgt agcgcgccgt
      361 gcgttcggag ggctcgccgg ggagcacgtc gagcccgaca cgcagggatt ttttggggat
      421 gagctcgagc agggcgtcgt agtcgacgag ctcgggtcgc gccgtgttga cgaagcttgc
      481 gccgtcggga agcgcgctca aaatcgcgcg atcgacgaag ccgcgcgtcc gctcgctgag
      541 ctcgagatgc acgctcaaga cgtcggactc gcgcgcgagg tcgatcgccg aatcgacgcg
      601 ccgcacaccg agctcggcgg cgcggaccag cgtgagggag cggccgtagg tgatgggacg
      661 catgccgtac gcacgcgcga gctccgccat gatgcgcccg gcgtgaccga agccgaggat
      721 gccgagggtg cggccctcga gaccgatcgc gcgcgcgtac tcgtcctttt cccagcggcc
      781 ggcgcgtagg ccgttgatcg cgtcgggaac gcggcggtcg aggcagccga tgagggtgaa
      841 ggcgagctcg gcgacggctc gcgcgttctt gcccggtgtc gtcgcgatgt agatgccgcg
      901 ctcgctcgcg aaggctacgt cgatgttctg cgtgccggcg ccggcacgaa tcaccagatt
      961 cagcgatttc cccgcggcga gcgccgccgc gctcacgggc gtcccgcgca cgatgagcac
     1021 gttgatgccg ccgagccggg ccgggagctc cgggcccgaa agtttcggct cgtaatcgac
     1081 ttccacaccg agggctcgca tctcgtccag ggcgtcctcg gacaggcgat cggcgaccag
     1141 cacacgcata gggggcggcg gttttagcat tcgaagcggg gtcgcaccta gcttcgactt
     1201 ccgcggtcgg ccgcggcgac gaacgcggcg gccagcccgg cttttagggc cgatacggcg
     1261 ccgggcggta gcgcgcgccg tggatcacga gcgcgggcga accgtcgggt tccgcctcga
     1321 gccatggacc gagcgcgatt tgcgccgctt gacggaagcg cgcgtcgaac gcgccgtgct
     1381 tcaccttgac gtagagccgc tcgccctcac cgactgcgag cgtcgtgggg tcgagcggct
     1441 cctcgctgcc atccgagagc acgagccgag gtccgtcggg agccgcgagg acgcgctcca
     1501 cgaagaaggg cacgtcctcg acctcgaaat acgaccaatc gtaaccgttc gtcaggatgt
     1561 agcggccatc gtcggggtga cggctgatcc agctcgcgaa cgcccgcgac atgccgccgt
     1621 gctgaaacgg ctcctgatgc tggaagaacc taccctcggc atcgaggcgg atcccactct
     1681 cgcgcgtacg acccggcggc ggcggcagcc gataaaaatc ggggtggtcg gcgggtcggg
     1741 ccacggcccc gatcctccag caagcctagc ctccgagcaa gtaccgcctt gacacatcga
     1801 cgacgaagcg ccccgcgagc gcgctccgtc cgagcagcat gcggtaatgc atggcggcgc
     1861 ggtccacgag cccgacctcg atgcgggctt cgaggtcgcc taagcgcgcg agcgcggtca
     1921 cgaacggccg cgactcgagc ttgccgctcg tcgaacgcac gcgagcgcgc cgcgtgacga
     1981 ccgcctcgat cgcagcgtgc gctcctgcgc cgagctcgaa gcggacccgg ccgttaccga
     2041 gctcggtcag gccttcgacg tgcaaagcgc tcgtgcgcgc cccggtatcg acccgcgccg
     2101 gcaggcgctc gagcccgaaa tcgaccagcg tgacgagctc gacggcgccg atcgtccaga
     2161 gcgcgccggg cgcgccatgg ggcccggccg cgtggagagc cgcccgccgg gcctggttca
     2221 tgcgttcgcg cgctgagcca gccgttcgcg gaaattgtcg atggtccgct gcaggccctg
     2281 gcgcaaatcg atcttgggct ggaagtgaat gaggcgctgc gccttagtga tgtcagggcg
     2341 gcgctgcttg ggatcgtcgg cgggcagcgg ccggtactcg atcttggagc cggacttcgt
     2401 gagctcgacc acgtggttgg cgagatcggc gatcgtgaac tcgccgggat ggccgaggtt
     2461 catcgggccg tcgagcttct cgaggcgcga gacgcgcatg aagccttcga tcagatcatc
     2521 gacgaagcag aaa
//
LOCUS       DATIML010000385         6070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_658208, whole genome shotgun sequence.
ACCESSION   DATIML010000385 DATIML010000000
VERSION     DATIML010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6070
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658208"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="VLJ38_06645"
     CDS             complement(<1..654)
                     /locus_tag="VLJ38_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HSU39224.1"
                     /translation="MEIKQQLRLSQQLVMTPQLQQAIRLLQLSRLEVIEEIRKELDDN
                     PVLSEDEPEARRGDAGADSVRPQPRDIPDVGREGDGDMKATEKATREVDWEKFLENRT
                     LQQPTTQPGRSGYDDLPPIEQNLTRPRSLQDHLLWQLQMSPFSDVERAFCELVIGNLD
                     DRGYLDLEGTERPDGTRTPDLTIEDLALEAGLHPDDAPLVLEMIQNFDPLGVAARDLR
                     "
     gene            complement(852..1970)
                     /locus_tag="VLJ38_06650"
     CDS             complement(852..1970)
                     /locus_tag="VLJ38_06650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39225.1"
                     /translation="MAAAVLGALGGAGRRERAVLAGALLLSAPLGVWAGAGMETGLVT
                     LFATLALAEVRLASLAAGAAAAWRPELLAWAWVLAAGSALLAATSARERSRELLLRVA
                     LALGPALAVACVRKTMFGSWAPLAVWAKPSDLAHGVFYAVGAFLGTGVPLFCGAPRAI
                     GRADGRTRLLLVALATHFVALVLAGGDWMVLYRLAVPVLPTAILAAARLARFSTPRAL
                     TLRGIAAAAVSFWFVLGVAWQARRVFEHRLELIDAARPLFGGARSIACLDVGWVGAAT
                     EASLVDLAGITDPVIAHLAGGHTSKHIPNGLLENRAVDTAVLLLAPGRAPAPHWQDSA
                     FSRNVETRLAEQPAFERFRVRGVLPLGGTEQVYIVVTR"
     gene            2492..4606
                     /locus_tag="VLJ38_06655"
     CDS             2492..4606
                     /locus_tag="VLJ38_06655"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSU39226.1"
                     /translation="MAISRGKRDRFTAAFYSGEEAWEIGLEADGTAVLVSVYRTAPSP
                     LVAVHERRLELVTLRQALLGALDETRKTTERAPAALLQARPALEAAGPSYGRPALRRV
                     GLTVATPAEEPVVVIAEARFRSAVPRGVGTLDEPHVERSDLCALLAPGKVSLRAGRAE
                     LNLAATYPFLVAEELLALAEEALRAERDERPLFRRSEVDTLKLSLRSTPAERGLVLKV
                     RSGSIDAVNAGAALAGIDPRAFAHAAARFALGLEAAFRSADPAQASNLRLQHFTRAAR
                     ALEQELAAAAADDSLPNSDPDSYRSFGLPRRESSRGTWEHGGKMRFSPRWVAAVPSID
                     LSATFQCGDRIVIGSPRQTACLDRTTGAVIWRRALPRAASVPTPFGLARITHDGEVTL
                     HELERGEPRFTLHLSPRNGGGAVGAVVNAPGLPRLLAVAERDRSVTAIDLVSGDVRWR
                     YTAPRPAAFKLRRAGRLLLVAGGDSALVALDAATGEVVWRVRDKLPFTGDLSIDRDAL
                     FATAGGPIGPTRLVKIDLWKGELCWTRELPARPTLGQVPLVTPETVAVPTRDRRGSGV
                     LALARETGELVFGHEPGLCAPTTAWLAVDDLLIGNAASGDLVGIGASDGHTRYQRSFP
                     RHVDADQPRRLEPILRSGALFVPQHQVHVVRPSDGSELGVLPSDLIPDLLRVDEDLNV
                     YVAEESGHVAAFGVAPRLSVVR"
     gene            complement(4638..5135)
                     /locus_tag="VLJ38_06660"
     CDS             complement(4638..5135)
                     /locus_tag="VLJ38_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39227.1"
                     /translation="MSGRIKAMFLLGVALLKTLLLRLFTRGSDGIARFRENYDADGLP
                     PVTAEEREHLVTFQRCIACGLCDRGEAGRIARSGGAYRGVMALVVAGSRSMPEFRAAA
                     YGFDFVPDAVLAEKESICPVRIPFRRIARFVRDKAAAVGGPLPLPPHVASLPPKPSAP
                     SDSPR"
     gene            5386..6042
                     /locus_tag="VLJ38_06665"
     CDS             5386..6042
                     /locus_tag="VLJ38_06665"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39228.1"
                     /translation="MSSVVASPSLSPNPTRLAASFYGACSDTDLVSGLVNNDPAAWQA
                     FTVRYGRLIQSCIHRVIARFPGIVRGDDALEITSTLYVQLLTNDRYKLRSFAPERGSK
                     LGTWLGLLATHSAYDFLRSVRKLPRGGELTEAEELASDTPDAVELTLNRERAARVSRV
                     LSDFTRKDREFVDLYFGEGLEPDEVAQRLGISVKTVYSKKHKIQRRLASLLSGSRLAD
                     "
BASE COUNT          971 a         2176 c         1990 g          933 t
ORIGIN      
        1 gcgcaagtca cgcgcggcaa cgccgagcgg gtcgaaattc tggatcatct cgaggacgag
       61 cggcgcgtcg tccggatgca agccggcctc gagcgcgagg tcctcgatcg tgaggtcggg
      121 ggtgcgcgtg ccgtcgggac gctcggtgcc ttccagatcg aggtaaccgc ggtcgtcgag
      181 gttgccgatg acgagctcgc agaacgcgcg ctcgacgtca ctgaacgggc tcatctgcag
      241 ctgccagagc aaatggtcct gcaggctgcg aggccgcgtc agattttgct cgattggcgg
      301 cagatcgtcg taaccggagc ggcccggttg cgtggtcggc tgctggagcg tgcggttctc
      361 gaggaacttc tcccagtcga cttcgcgcgt cgccttttcg gtcgccttca tatcgccgtc
      421 gccctcgcgg ccgacgtcgg ggatgtcgcg aggctgaggc cgcactgaat ccgcccccgc
      481 gtcgccgcgg cgggcttcag gctcgtcctc cgagagcacg gggttgtcat cgagttcctt
      541 gcggatctct tcgatgactt cgagccggga cagctgcagc agacgaatcg cctgttggag
      601 ctgcggcgtc atgaccagct gctggctcag gcgaagctgt tgcttgattt ccatgcttgc
      661 cgctgcgggt tactcggggc gccgggagag ctcgccccaa ctttggacgc agtctaacac
      721 cgcaaagcaa gaagcgcgcc ctcgtgttct tgctttcgtc ctcgtgccgt cgtcgatagg
      781 ccgtttggcc ggcatgcgac cgcggcgaat tggcctcaat cgtcgttcgt actgtgacaa
      841 atcgcccatt ttcaccgggt gaccacgatg tagacctgct cggttcctcc gagcggtagc
      901 acgccgcgga ctcgaaatct ttcgaaggcc ggctgctcgg caagccgtgt ttcgacattg
      961 cgactgaaag ccgagtcctg ccaatggggc gcgggcgccc gccccggcgc aagcaggagc
     1021 accgctgtat cgaccgcccg gttctcgagc agcccattcg ggatgtgctt gctcgtgtgg
     1081 ccgcccgcaa ggtgcgcgat gaccggatcg gtgatcccgg cgaggtcgac taacgacgct
     1141 tccgtcgctg cacccaccca cccaacatca aggcaggcga tcgagcgggc gccgccgaac
     1201 agcgggcgcg cggcgtcgat taactccaac cgatgctcga agacccggcg ggcctgccag
     1261 gcgacgccca gcacgaacca gaacgaaacc gctgctgccg cgatacccct cagagtgaga
     1321 gcgcgcggcg tggaaaagcg tgcgagcctc gccgcagcga ggattgcggt cggcagcacg
     1381 ggtactgcca aacgatacag caccatccag tctccgccgg cgagcacgag ggccacgaaa
     1441 tgagtcgcga gcgcgaccag cagcagccgc gtgcgaccat cagctcggcc gatcgcccgg
     1501 ggtgccccac aaaaaagcgg caccccggtg cctaaaaacg ctcctaccgc gtagaagacg
     1561 ccgtgcgcca gatccgacgg cttcgcccag acggctaggg gcgcccatga gccgaacatc
     1621 gtcttgcgga cgcacgcgac ggcgagcgct ggacccagcg cgagcgcaac ccgcaggagg
     1681 agctcccggc tgcgttcccg cgcgctggtc gccgcgagca gcgccgagcc ggccgccagg
     1741 acccacgccc aggcgagcag ctccggacgc caggctgccg ccgcccccgc cgccagcgac
     1801 gcgagccgca cctcggcgag cgcgagcgtc gcgaacaacg tcacgaggcc tgtctccatc
     1861 ccggcccccg cccacacccc gagcggcgcc gataagagca gcgcccccgc gagcaccgcc
     1921 cgctcgcgcc gccccgcccc gcccaacgct ccgagcacgg cggcggccat gagccaagct
     1981 atcgtgccga gcacgcgccc gcgctgcagc attccgagca cggacgccgg accaaaggct
     2041 gcaagtaggt tcgcccaacc cagtggtgtg acggcatcga ccacgggacc ggtcgcgttg
     2101 aagcggtaac cgtgaccggc ggcgaggtgc tcggcgacgc gggcgctcac gagcgcgtca
     2161 tcgaccgtaa acccgcgaaa tgcgaccagc gccgggaccg cagcgaagag gccaatcagc
     2221 gcgcctttcg ccgcgttact cgctcgcatc tcggctgtcc actcctcggc gatcgcgtcg
     2281 caaaactcca acttcgatcg ctcccgtttc tacgatgcgc acatcgatgc ccgcaatcga
     2341 ggtcctggtt cgccaagtcc ccgcgcttac ttcctccgcc gctgagccca atccgggcct
     2401 cctcgacttc attgtcgatg gaatcaacgt cacggctcgg cttggtagag gtgcggccgt
     2461 tgccttactt gcggaacttt gtggtggcgt ggtggccatc agtcgaggca aacgcgatcg
     2521 cttcaccgct gccttctact cgggggagga agcctgggaa atcgggctcg aagccgacgg
     2581 gacggccgtg ctcgttagcg tctatcgcac ggcgccaagt ccgctcgtgg ccgtccacga
     2641 acgccggctc gagctcgtca cgctgcgcca ggcgttgctt ggagcgctcg acgagacgcg
     2701 caaaaccacc gagcgcgctc ccgccgctct cctgcaggcc cgccccgcgc tcgaagccgc
     2761 cggaccgagt tacggccgac cggcgctccg gcgcgtcggg ctcaccgttg cgacaccggc
     2821 cgaagagccc gtcgtcgtga tcgcggaggc gcgctttcga tcagcggtgc cgcgcggagt
     2881 cgggacgctc gacgagccgc acgtcgagcg ctcggacctg tgcgcactgc tcgcccccgg
     2941 caaggtcagc ttgcgtgcag gtcgcgccga gctgaacctc gcggcgacct atccgttcct
     3001 ggtcgccgag gagctactcg cgctcgccga agaagccctg cgcgccgagc gcgacgagcg
     3061 gccgctcttt cgccgctcgg aagtcgacac gttgaagctc agtctgcgct cgacgcccgc
     3121 cgagcgcggc ctcgtgctca aggtgcgctc gggcagcatc gacgccgtca acgccggcgc
     3181 cgcgctcgcc ggcatcgacc cgcgcgcgtt cgctcacgcc gccgcgcgct tcgcgctcgg
     3241 cctcgaagca gcgttcagga gcgccgaccc ggcgcaggcc tccaatttgc gcttgcagca
     3301 cttcacgcgc gctgcccgcg ccctcgaaca ggagctcgcc gccgccgccg ccgatgactc
     3361 gctgccgaac tccgatcccg acagctatcg gagcttcggc ttgccacgcc gggaaagctc
     3421 gcgcggcacg tgggagcacg gcggcaagat gcgcttctct ccgcgctggg tcgcggcggt
     3481 gccgagcatc gacctcagcg ccacgttcca gtgcggcgat cgcatcgtga tcggctcacc
     3541 gcgccaaaca gcgtgcctcg atcgcacgac gggcgcggtg atttggcgcc gcgcgttgcc
     3601 gcgcgccgcc tcggtaccga cgccgttcgg actcgcgcgc atcacccacg acggcgaagt
     3661 cacgttgcac gagctcgaac gcggcgagcc gcgcttcacg ctccatcttt cgccgcgaaa
     3721 cggcggcgga gccgtgggtg cggtcgtcaa cgctcctggc ctgccgcgac tgctcgccgt
     3781 cgcggagcgc gatcgctcgg tcaccgcgat cgacctcgtg tcgggcgacg tgcgctggcg
     3841 ctacaccgcg ccgcgaccag ccgcgttcaa actgcgccgg gcgggccgcc tcctgctcgt
     3901 cgcgggcggc gactccgcgc tcgtcgcgct cgacgcggcc acgggtgaag tcgtctggcg
     3961 cgtgcgcgac aagctgccat tcacgggcga tctcagcatc gatcgcgatg cgctgtttgc
     4021 cacggcgggc ggacccatcg gaccgacgcg cctggtcaaa atcgatcttt ggaaaggcga
     4081 gctctgctgg acgcgggagt tgcccgcccg cccgacgctc ggccaagtgc cgctcgtcac
     4141 gcccgagacc gtggccgttc cgacacgcga ccggcgcggc tcgggcgtgc tcgctctcgc
     4201 gcgcgaaacg ggtgagctcg tgttcggcca cgagccgggc ctctgcgccc cgacgacggc
     4261 ctggctcgcg gtggacgacc tcttgatcgg taacgccgcg tccggcgacc tcgtcggtat
     4321 cggagcgagc gacggccaca cgcgctacca gcgctcgttc ccgcgtcacg tcgatgccga
     4381 tcagccacgc cggctcgagc cgattctcag gagcggcgcg ctgttcgtgc cgcagcatca
     4441 ggtgcacgtc gtacgaccga gcgacggcag cgagctcggc gtgctaccga gcgacctcat
     4501 tcccgacctc ttgcgcgtgg acgaagacct gaacgtctac gtcgcggagg agagcgggca
     4561 cgtcgcggcg ttcggcgtgg cgcctcgcct ctccgtcgtc cgctgacgta gacgctatcg
     4621 agctacgacg acggcgccta gcgcggcgag tcactcggcg cgctaggctt cggcggcaat
     4681 gaggccacgt gcggaggcag tggcagcggc ccaccgaccg ccgctgcctt gtcgcggacg
     4741 aagcgagcga tgcggcgaaa cggaatgcgc accgggcaga tgctctcttt ctcggcgagc
     4801 accgcgtcgg gcacgaaatc gaagccgtag gctgccgcgc gaaactccgg catgctgcgc
     4861 gaccccgcga ccacgagcgc catcaccccg cggtaagcgc cgccggagcg cgcgatgcgc
     4921 ccggcctcgc cgcgatcgca cagcccgcac gcgatacagc gttgaaaggt gaccaggtgc
     4981 tcgcgttcct cggccgtgac gggcggcagc ccatcggcgt cgtagttctc tcggaagcgg
     5041 gcgatgccgt ccgagccgcg cgtgaaaagc cgcaagagga gcgtcttcag cagcgcgacc
     5101 cccagcaaga acatcgcctt gatgcggccg ctcactcgtt ggagcgtacc actcgccgct
     5161 tcggcgtcgg acttggtttg cgccggggga ggaattgcca gggcagctcg taacaagaac
     5221 cgaagcgtgg ggagttgcac gaaagcgtgg cgtcacagcg tgacgctggt tacgccctgt
     5281 tacgcatgcc aactacgcga attcattact aaaaccactt ggcacgacgg gtgctgaagg
     5341 gaagaacgcg ggcacgcaac gcccgccctt ttggaggttt ttcccatgtc gtccgtcgtc
     5401 gcgtctccgt ccctcagccc gaaccccacg cgtctcgccg cctcgttcta cggcgcgtgc
     5461 agcgacacgg acctcgtgag cggtctcgtg aacaacgacc cggcggcctg gcaggcgttc
     5521 acggtccgtt acggccgcct gatccagagc tgcatccacc gcgtgatcgc gcgcttcccg
     5581 ggcatcgtgc gcggcgatga cgcgctcgag atcacctcga cgctgtacgt gcaattgctc
     5641 accaacgatc gctacaaact tcggagcttc gcgcccgagc gcggttccaa gctcggcacc
     5701 tggctcggtt tgctcgccac gcactccgcg tacgacttct tgcgcagcgt gcgcaagctg
     5761 ccacgcggcg gtgagctcac cgaagccgaa gagctcgcga gcgacacgcc cgacgccgtc
     5821 gagctcacgc tgaaccgcga acgcgccgcg cgcgtgtcgc gcgtgctctc ggacttcacg
     5881 cgcaaggacc gcgagttcgt cgatctctac ttcggcgaag ggctcgagcc cgacgaggtc
     5941 gcgcagcgcc tgggcatcag cgtgaagacc gtttactcca agaagcacaa aattcagcgc
     6001 cgactggcga gcctgctctc cggttcgcgc ctcgccgatt gacccgttgg cccgaccggt
     6061 ccgggagccg
//
LOCUS       DATIML010000386         5102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3543863, whole genome shotgun sequence.
ACCESSION   DATIML010000386 DATIML010000000
VERSION     DATIML010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3543863"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..546
                     /locus_tag="VLJ38_06670"
     CDS             112..546
                     /locus_tag="VLJ38_06670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39229.1"
                     /translation="MTALTTRPLQLLGILSLAGALAVGCSSSDDDQAPPCRDCVYPTT
                     TVPGVPPGGPVGSGLPSAGGTTGGTTQTGTGGTSPGPVAGGTGGTVGGDLGGTGGGVS
                     SPIPVGGSLGFGGTTSTGGTLAAGGTDPFGSNPFGSGATGGI"
     gene            complement(585..1457)
                     /locus_tag="VLJ38_06675"
     CDS             complement(585..1457)
                     /locus_tag="VLJ38_06675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39230.1"
                     /translation="MSDEAELARVVGLVEAAKYEECAARLSRLLDAKNPHPLTDAQVL
                     ETARLYHATCLIGLGKKEQADVPLRAAIRKNPQMRPPDSLVFPPRVVDRFLKLREEYY
                     KELRTVDKDAIERAEREAKAREEKESAQLAYMLMLERVAREQVVVEKHSRYLALVPFG
                     VGQFQNGNPVLGWTFLGTEAALGVVSLTSLAVFSNIKNQADTYEAHAQTPATNVNSRL
                     QNWYLALNLSTYTLLGVAALGIIEGQISFVPEVRHVSERPLPKLPKNQPAWLLTPDIA
                     VGSHDFHVGVRGAF"
     gene            complement(1646..3496)
                     /locus_tag="VLJ38_06680"
     CDS             complement(1646..3496)
                     /locus_tag="VLJ38_06680"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39231.1"
                     /translation="MIATAESKPDLAKFEIREEIGHGGMATVYLARDKRLGRDVALKI
                     IHRHLRENVEVAARFASEARAVAKLKHPNIVEVYDVSDEAEPERYLVVELVRGTTLRA
                     LIAQNERLPAEIAAIAGVEIAGALDHAHQFGVIHRDVKPENVLVALPTPGAPDVRASN
                     ADDTLIKITDFGIAKLLDAQGVTSTGQVLGSPAHMAPEQIEGGDVNARSDVFGLGVLL
                     YEAMVGRLPFDGKNPAQVLRRVLDGAFTPADKARPSVGQRFAAIVGKALAHDPAQRYA
                     SAEEVGTALREELTRLGFVDLRGELRAFLVDPKAYQAAYEPRLVERLVTLATEARAKK
                     DIPESAAYLNRALALRPDDTSILAAVSSLSRAERLRRNLRSAALAIGASAVVAAVAFG
                     VSRIESKRPAVVEARLAPSAKGPAPGTSAAAAAPSAEPETTDEKPHVVPRKPPLRAVG
                     GGSASRTAPSASAAPSMARVRIAVDGPANTIVRVDGADLADWFGTQEIAVGTHVFDFI
                     APNAECCESGDRQTVEIRPPNGPDDLQKVRGRIAFRDAVVEFRGPPGSRASCAELGDF
                     PVPSHQTFQMTSAARRGSCTLIPPPGSGLPVKPFDVTLSPGRVSSVPPGS"
     gene            complement(3508..4908)
                     /gene="pyk"
                     /locus_tag="VLJ38_06685"
     CDS             complement(3508..4908)
                     /gene="pyk"
                     /locus_tag="VLJ38_06685"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSU39232.1"
                     /translation="MISRRAKIVCTIGPAVESREQIRELIAAGMDVARLNFSHGEHSE
                     HGRRAEMIRVESAAMGKPVAILQDLCGPKIRTGKIGPAALAVGDTVDLISGETGDDRT
                     IAINYDGLEHDVRPEDRILLSDGQVELKVIGIKGNRVEVRVEHGGPMRAKMGVNLPSG
                     SLRLGALTEKDKHDLEFGLSIGVDFIALSFVRRAEEVQELREICERKGKPTPIVAKIE
                     TPNAVERLDSIVRAADAAMVARGDLGVELPPETVPVIQKQIIGTCRIHRKPVIVATEM
                     LQSMVDSPRPTRAEASDVAHAVFGGTDAVMLSAETATGKFPIHACRMMDRIIRQAEAS
                     RFLNLSPSEPDHTTPDAIAHAAVSIAREVGAKLVVALTESGVTARLVSKARPTVPILA
                     FSTEERVLRRLALYWGVTPRSLVAKATLEDQVRDLSEVLTESNLVRSGERYVMVYGAR
                     VGVRGATNAVRVEQLA"
BASE COUNT          757 a         1736 c         1758 g          851 t
ORIGIN      
        1 gcagcggagc gcggaaaaaa gtcacgctga gcggagtcgc tcgccgaatc cgcagaagac
       61 cggacgagag cggctcgccc ctgcggcacc gttcttgcga atcgtcggat catgaccgcc
      121 ctcaccacgc gcccgttgca gctgctcggc attttgtcgc tggccggcgc gctcgccgtc
      181 ggttgttcgt cgagcgacga cgaccaagcg ccgccgtgcc gtgactgcgt gtatccgacc
      241 accaccgttc cgggcgttcc gcctggaggc cccgtcggga gtggactgcc ctccgcgggc
      301 ggcacgacgg gtggcacgac tcaaacggga acgggcggga cgagtcccgg acccgtcgcg
      361 ggcggcaccg gtggcacggt gggcggcgac ctcggcggta cgggcggcgg cgtgagtagt
      421 ccgatccccg tcggcggttc gctcggtttc ggcggtacca cgagcacggg cggcaccctc
      481 gcagcgggtg gcaccgatcc gttcggcagc aatccgttcg gctctggcgc gaccggcggc
      541 atttgagccg acgcgtcacc gctgcgtacg ccagacagcc gatttcagaa cgcgccgcgc
      601 acgccgacgt gaaagtcgtg cgagccgacg gcaatgtccg gcgtgagtag ccaggccggt
      661 tggttcttcg gcaacttcgg taacgggcgc tcgctcacgt ggcgcacctc gggcacgaac
      721 gagatctgcc cctcgatgat gccgagcgcc gcgacgccga gcagcgtgta cgtgctcagg
      781 ttcagcgcga ggtaccagtt ctgcagtcgg ctgttcacgt tggttgcggg ggtctgcgcg
      841 tgcgcctcgt aagtgtcagc ttggtttttg atgttgctga acacggcaag cgaggtgagt
      901 gagaccacgc cgagcgccgc ttcggtgccg aggaacgtcc agccgagcac cggattgcca
      961 ttttggaact ggccgacgcc gaacggcacg agcgccaagt aacggctgtg cttttcgacg
     1021 acgacttgct cgcgcgcgac gcgctcgagc atgagcatgt acgcgagctg cgcgctttct
     1081 ttttcctctc gcgccttggc ttcgcgctcg gcccgctcga ttgcgtcctt gtcgacggtg
     1141 cggagctcct tgtagtactc ctcccgcagc ttcaagaagc gatcgacgac gcgcgggggg
     1201 aacacgaggc tgtccggcgg gcgcatctgc gggttcttgc gaatcgcggc gcgcagcggc
     1261 acgtccgctt gttccttctt gccgagaccg atgagacagg tggcgtgata gagccgcgcc
     1321 gtctcgagga cctgcgcgtc cgtcagcggg tgcggattct tcgcgtcgag caagcgcgag
     1381 aggcgcgcag cgcactcctc gtacttcgcg gcttcgacca gaccgacaac gcgcgcgagc
     1441 tccgcctcgt cgctcaagcg ctcttccgcc ggcacagcac gctccccggc gtgcgcagcg
     1501 ctgggactgc cgggcgcgcg agccggctcc gctcgccccg gagcttcgtc cgccgctgcg
     1561 tgaccgagga accagaacgc cccggcgaag gtcgccaccg agaccgaccg aagacgtgaa
     1621 tgcatgctga gcccccggcg gggattcagg agccgggggg gacgctcgag actcgaccgg
     1681 ggctcagggt cacgtcaaat ggtttcacgg gcaagccgct cccgggcggc gggatgagcg
     1741 tgcagctgcc ccgccgcgcc gcgctcgtca tctggaaggt ttggtggctc gggacgggaa
     1801 aatcgcccag ctccgcgcaa ctagcccgcg agccgggcgg accccggaat tcgacgacgg
     1861 cgtcgcggaa ggcgatgcgc ccgcgcacct tctgtaggtc gtccggccca ttcggcggcc
     1921 ggatctcgac ggtctgccgg tcgccggact cacagcactc cgcgttcgga gcgatgaagt
     1981 cgaacacgtg ggtgccgacg gcaatctcct gcgtgccgaa ccagtccgcc aggtcggctc
     2041 cgtccaccct gacaatcgtg ttggcgggcc cgtcgaccgc gatgcgcacg cgcgccatgg
     2101 acggggcggc cgaggccgac ggcgccgtgc gcgacgcgga gccccctccc acggcgcgca
     2161 gcggcggctt tcgggggacg acgtgcggct tttcgtcggt ggtctcgggc tccgcgctcg
     2221 gtgccgcggc cgccgcgctc gttccgggcg cgggtccctt ggcagacggg gccagccgcg
     2281 cctcgaccac cgccggccgc ttgctctcga tccgcgaaac tccgaacgcg accgcggcga
     2341 cgacagcgct tgcgccgatg gcgagcgcgg cgctccgcag gttgcggcgc agtcgctccg
     2401 cgcgactgag actcgacacc gccgccagaa tgctcgtgtc gtcgggcctg agcgcgagcg
     2461 cgcgattcaa gtacgccgcc gactcgggga tgtctttttt ggctcgcgct tcggtcgcga
     2521 gcgtcacgag ccgctcgacg agccgcggct cgtaggcggc ttggtacgcc ttcgggtcga
     2581 cgaggaacgc gcggagctca cctcgcagat cgacgaagcc gagccgcgtg agctcttcgc
     2641 gcagcgccgt gcccacctcc tccgccgagg cgtaacgctg cgccgggtcg tgggcgagcg
     2701 ccttgccgac gatggccgcg aagcgctggc cgacggaggg gcgcgccttg tcggcgggag
     2761 tgaaggcgcc gtcgagcacg cgacgcagca cttgggcggg gtttttgccg tcgaacggca
     2821 agcggcccac catcgcttca taaagcaaga cgccgagtcc gaacacgtcc gagcgcgcgt
     2881 tcacgtcgcc gccctcgatc tgctcgggcg ccatgtgcgc gggcgagccg agcacctggc
     2941 ccgtcgaagt gacgccctgc gcgtcgagca gcttcgcgat gccaaaatcg gtgattttga
     3001 tcagcgtgtc gtcggcgttg ctcgcgcgca cgtccggtgc gccgggcgtc ggcagcgcga
     3061 cgagcacgtt ctcgggcttc acgtcgcggt ggatcacgcc gaactggtgg gcgtgatcga
     3121 gcgcgccggc gatctcgacg cccgcgatgg cggcgatctc ggccggcagt cgctcgtttt
     3181 gcgcgatgag cgcccgcagc gtcgtgccgc gcacgagctc gacgaccagg taccgttccg
     3241 gctccgcctc gtccgagacg tcgtagacct cgacgatgtt cgggtgcttg agcttggcga
     3301 cggctcgagc ttcgctcgcg aaacgcgccg ccacctcgac gttctcccgc aggtggcggt
     3361 ggatgatctt gagcgctacg tcgcggccga gccgcttgtc acgcgcgagg tagaccgtcg
     3421 ccatgccgcc atggccgatc tcctcgcgga tctcgaattt tgcgaggtcg ggctttgatt
     3481 ccgccgtcgc gatcacccag ggctccctca ggcgagctgt tccacccgga cggcgttcgt
     3541 cgcgccgcgc acaccaacac gtgcaccgta aaccatcacg taccgctctc ccgaccggac
     3601 cagattactc tcggtcaaga cttcgctcaa gtccctcacc tggtcctcga gcgtcgcctt
     3661 ggcgacgagc gatcggggcg tcacccccca atagagcgcg agacgccgga gcacgcgttc
     3721 ctcggtggaa aaagccaaaa tcggcaccgt ggggcgggcc ttcgagacca ggcgagccgt
     3781 gacgccgctc tcggtgaggg cgaccaccag ctttgccccg acctcgcgcg cgatcgagac
     3841 ggcggcgtgc gcgatggcgt cgggggtcgt gtggtcgggc tcggagggcg agaggttcaa
     3901 aaaccggctc gcctcggcct ggcggatgat gcggtccatc atgcggcagg cgtggatcgg
     3961 aaacttaccc gtcgccgtct cggccgagag catcacggcg tcggtgccac cgaacacggc
     4021 gtgcgccacg tcgctcgctt cggcacgcgt cggacgcggc gaatcgacca tcgactggag
     4081 catctccgtt gccacgatca cgggctttct gtgaatgcga caggtgccga tgatttgctt
     4141 ctggatcacg ggcacggttt cgggcggcag ctccacgccg agatcgccgc gggccaccat
     4201 cgcggcgtcg gcggcgcgca cgatcgagtc gaggcgttcg acggcgttcg gcgtctcgat
     4261 cttggcgacg atgggcgtcg gcttgccctt gcgctcgcag atctcgcgca gctcctgcac
     4321 ttcctccgcg cgccgcacga acgaaagcgc gatgaaatcc acgccgattg aaagcccgaa
     4381 ctccaggtcg tgcttgtcct tttccgtgag cgcaccgagg cggaggctgc ccgacgggag
     4441 attgacgccc atcttggcgc gcatcggccc gccgtgttcg acgcgtactt cgacgcggtt
     4501 gcccttgatg ccgatcacct tgagctcgac ctgaccgtcc gagagcagga tgcgatcctc
     4561 gggtcgcacg tcgtgctcga ggccgtcgta gttgatggcg atcgtgcgat cgtcgccggt
     4621 ttcgccggag atgaggtcta cggtatcgcc gacggcgagc gcggccggcc cgatcttgcc
     4681 ggtcctgatt tttggaccgc agaggtcctg caggatggcc acgggtttgc ccatggcggc
     4741 gctttcgacg cgaatcattt cggcgcggcg gccgtgctcg gaatgctctc cgtgcgagaa
     4801 gttgaggcgg gcaacgtcca tcccggcggc gatgagctcc cggatctgct cacgggattc
     4861 gacagcggga ccaatggtac agacgatctt ggcgcgacga gaaatcatgg gacgacgagc
     4921 cagcatgcca cacagcgcgc cggaatgggg taggttctcc tcccactatc gatgaccgac
     4981 cgtgaagttg gctttcgacg caatgcgcaa ggcgccctca ccgtctccgg cgctccgctc
     5041 ggggcgctgc tcgcccctct tttccaggcg tctcgcatcg gcacacccgc ctacgtgtac
     5101 ga
//
LOCUS       DATIML010000387        10108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4120022, whole genome shotgun sequence.
ACCESSION   DATIML010000387 DATIML010000000
VERSION     DATIML010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10108
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4120022"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1705
                     /locus_tag="VLJ38_06690"
     CDS             <1..1705
                     /locus_tag="VLJ38_06690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39233.1"
                     /translation="PSVEDATKRLRVPYAFATDTWADLGNVSVFRHDNGADPYEQANF
                     LVTTQETRHILDNFRRDRTTFSVLAAADRSYSRYNEKLMHLGAALGFLRSIYQDLATN
                     QGYSFDGVWPQVVASQAPENMVATTLAFDHFTRELTRPEPGQHYFRASAFQDPVLHSA
                     SDPDDYGPPSSKPDVVIPNGTTGFLKDVGFGGHPLENALSDNHGEFDVDYTENAGSYY
                     DKVNVALLLAESEDRFISQSRRDFYDARFRAVGMADVLPDGFRRAIANALTGDRGILA
                     PQIATDSRGSPLLDTSGNVALDPQAQLYPSQPLGWASLWPASGPEVCFPSLGRNACTN
                     PLDDSPLAPAAPAHSAPIDPQIGWEVQKFLVAWTIGYIKANEKSQWLDQLRMFRGGAN
                     PDPGLGDQVEWEDPVSGTVYHAASYGKECFYGTGADCTGGKLVEKGIAARVLEYANEV
                     TARGYLLDEATYPASDGSGETPAHPAGYTQFGHAVVLRQPDGTPIVRPDPAVRGVVNG
                     SLVTNQACDQNQDPSCKPLSVTDNHYAYELQGYKSVPDFIWLASDVYGLLGTPTQKGT
                     Y"
     gene            complement(1699..2079)
                     /locus_tag="VLJ38_06695"
     CDS             complement(1699..2079)
                     /locus_tag="VLJ38_06695"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU39234.1"
                     /translation="MIFQGQTMAFVSARDLDRAEAFYVGRLGLARVFRNDFALDVKGN
                     DLPIRITRVPDLEPQPFTVLGWHVERIDEAVAQLVQAGIEFRRYPGMEQDAAGIWRAP
                     SGARVAWFEDPDGNVLSLSEHSTQ"
     gene            2152..2889
                     /locus_tag="VLJ38_06700"
     CDS             2152..2889
                     /locus_tag="VLJ38_06700"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU39235.1"
                     /translation="MGDVKRHYAELLGPVYTWYTSVGGDPVARAAAWLERHGLLTGTR
                     YLDLGAGSGAHALALLRAGKRVTAVDFDPALLGELRAAGEPYAELLTLHAADLSAFLR
                     SATSADFDLILCAGDTLTHLPSFGDVDELVRESARCLDARGRLAVAYRDSSRFAAEGV
                     ERFIEVARDAKRTLHCLLEPLDAEHLRVTDLVTEVGPDGPRTRLGDYVKLRIPPERLV
                     KAAGAVGLELTERADERGMTTLCFRKA"
     gene            complement(2915..3313)
                     /locus_tag="VLJ38_06705"
     CDS             complement(2915..3313)
                     /locus_tag="VLJ38_06705"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSU39236.1"
                     /translation="MRDHLRPSDIVGRYGGEEFVVVLREAGTDAARRVAERIRQSIAA
                     ASVVDLPVRVTLSAGIAAREPDESMSELIARADRGLYAAKRAGRNRVLVAAARESVHA
                     SFLPAPPDTLVRPLALQSERALELGHSAAE"
     gene            3633..5054
                     /locus_tag="VLJ38_06710"
     CDS             3633..5054
                     /locus_tag="VLJ38_06710"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSU39237.1"
                     /translation="MAALQIVQASLRENVALSTLAGLAESDPAFAIRVLSLVNSAAFG
                     GGRKIADVKQATSLLGVRGLRNIGLNLALTDMVPWGESGNLLLIACLRRATACRLLAE
                     AAGARDLDGYFTTGLFLDVGLLSRARADASGTEEVVRLPAQHRAIFERSLGLVDHAEL
                     GSTLASEFYLSQEVTEAIASHHDATPPVADLARIAWVAERVAARFEAGNAALLVEEAR
                     TAAALLGLSAARTDEVMKQVPALAAAAAHGLGCENVDEKLVGATLVDVNRGLAELNQS
                     YEVMVRRLEALIAEKEELAKNLAEANRRLETMAMSDPLTGLANRRAVEAALARDLARA
                     DRDGRWLSIVTLDVDHFKHVNDTHGHGGGDQVLVVLGNLLRTALRAGDLAGRIGGEEF
                     LTILPDTDGDGALVAAERLRKRIEAERVVLSSGELTFTSSLGVASIKGPGCVRAATAL
                     VEKADAALYQAKRSGRNRVVRAA"
     gene            complement(5062..6039)
                     /locus_tag="VLJ38_06715"
     CDS             complement(5062..6039)
                     /locus_tag="VLJ38_06715"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HSU39238.1"
                     /translation="MVSPRKTEKSGEHGRRYALRFVSGKYQGGEFPLSEGEEVVVGRS
                     SDLDMVLVEEMVSRKHAIFRLSGGVLSVEDQGSTNGTFVNGERIEKANLNEGDRVLIG
                     TSILRVVGSDATSPVEGRRSLLDNATQKAVRPRTNELPASQEPPRMSGSLEEIPLPDL
                     MQLFSTSKKSGVLVLRNAESTGRLYLDLGRIRHAEINTSPDLTPGKAVYRLLNFTRGQ
                     FALDPPEDRAFAEPLDLSATEVLMEGFRQLDELGTLRERLPPHDAVLSLPKTLPGRLR
                     DLAPEDLDWIEIAFRGRTFGGALDAASGTDLETARALLGLMERGWLAAG"
     gene            complement(6104..8311)
                     /locus_tag="VLJ38_06720"
     CDS             complement(6104..8311)
                     /locus_tag="VLJ38_06720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39239.1"
                     /translation="MDLRTRTSLFCGVLALTIAVSILLRGRVRRPQVYFAGLAADIGL
                     WYLAQWLYHVVRSDLWARFTSVLAVLLPQFAVQFFGAILPETERPSSLPRVTLGVGIP
                     MLVFVLTQHSNGIVRSAVFIYVFGFIAAGLWSLWRRGERSGSRAVQRRVRFLVLIGAL
                     AASFSLADFLWFIGAPLPPVSAVLAIVFLFVLSESLIRERLVDLYDVLVKLLVSTALA
                     FSLAGIFYVFVVLFGGFEVMYLGAILAAIVILVLFEPLRERAEGYVSRVFLRERVDLE
                     RSVSRARARLLHVLQPGEMQEIVMAALEGSRRATGAALYLRDPGGSDFALAASFGPPA
                     PARVEVATAGPLLERLVHTPSVSLEEVALRIVERRRSGQQREASADERVLAASEVFGP
                     FKQAAVLAIRGEDRELRGLLLVIDDRARDAFPPDDLAVLEPLAVQIGVVMENSKQYRR
                     MQERDRLAVLGQMAAGLAHEIKNPLGAIKGAAQLLGDAQSAEHLGAPEREFLGIILEE
                     VERLDRVVGSVLDYARPSKGDVGAIDVNTVVKGTLKLLASDRAEVPDAHMDLAPDLPR
                     VRADAEQLRQVLINLIRNASQAMGLGGTVYVSSRKREERHSGGREPATFVEIAVRDEG
                     PGIAPQVMKNLFVPFVTTKDKGTGLGLAISQRVVAEVGGRIDVATRPGLGSTFTVILP
                     VAPDAAAEPVIDSAGGLLSAALGASSALDSPANRTAGEAFGAAGGSTNGRPRD"
     gene            complement(8401..8964)
                     /locus_tag="VLJ38_06725"
     CDS             complement(8401..8964)
                     /locus_tag="VLJ38_06725"
                     /inference="COORDINATES: protein motif:HMM:NF013621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nicotinamide nucleotide
                     adenylyltransferase"
                     /protein_id="HSU39240.1"
                     /translation="MTTAVFGGSFDPPHVAHLLAAAYVLGVGGFERLVVAPVYAHAFA
                     KPLSAFEERVELCRVCFADLPRVEVSVLEAELPRPNYTVRLLERLHSERPDEPLRLVV
                     GSDVLPETARWHDFARVSELAPPFVLTRRGFERPELGPALLPEVSSTHVRELLARRGD
                     LDAERELAWLVPERVRARIAERGLYGA"
     gene            complement(8996..9724)
                     /locus_tag="VLJ38_06730"
     CDS             complement(8996..9724)
                     /locus_tag="VLJ38_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HSU39241.1"
                     /translation="MQEAALGRGPAGEARRLPGWTSQALLVLSKDLRIEARTGEVVVT
                     SSFFALLLVVLASLSLFGGPNSARIVGSGVIWLSITFAAVLALGRTWQREREEGALDG
                     LLVAPLSRSALFVGKLLGILIFLLLISVVVIPLTALFFSLDLDRYGLGLACIALTALP
                     GVAAAGTLFGSMTVRTAARDLLLAIVLFPLISPTLLAAVAATRELLGGTPLGELGDFF
                     RLMAVFDIVFTAGGVALFGTLVER"
     gene            9755..>10108
                     /locus_tag="VLJ38_06735"
     CDS             9755..>10108
                     /locus_tag="VLJ38_06735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39242.1"
                     /translation="MPSFRVENVFECSEETFWEKVFFDAEYNRRLFYDELHFADWREL
                     ERKDEGERVHRFVKAQPPMADLPGPLKAAIGDGAGYEERGVFVRATRRYDANVQPNRL
                     SDKVNVTLIFRTEPLD"
BASE COUNT         1762 a         3469 c         3409 g         1468 t
ORIGIN      
        1 gccgagcgtc gaggacgcga ccaagcgctt gcgcgtaccc tacgctttcg ccaccgacac
       61 ctgggccgac ctcggcaacg tgtcggtgtt ccggcacgat aacggcgcgg atccgtacga
      121 gcaggcgaac ttcctcgtca cgacgcaaga gacgcgccac atcctcgaca acttccgacg
      181 cgatcgcacg acgttcagcg tcctcgcggc ggcggatcgc tcgtacagcc gctacaacga
      241 aaagctcatg cacctgggcg cggcgctcgg gtttttgcgt tccatctatc aggacctcgc
      301 caccaaccaa ggctacagct tcgacggcgt ttggccgcag gtggtggcgt cccaagcgcc
      361 cgagaacatg gtggcgacga cgctcgcctt cgaccacttc acgcgcgagc tcacgcggcc
      421 ggagcccggt cagcactact tccgggcgag cgctttccaa gatccggtgc tgcactcggc
      481 gagcgatccg gacgactacg gtccgccgtc gagcaagccc gacgtcgtga tcccgaacgg
      541 cacgaccggc ttcttgaagg acgtgggctt cggcgggcac ccgctcgaga acgcgctctc
      601 cgacaaccac ggcgaattcg acgtcgacta cacggagaac gccggctcgt actacgacaa
      661 ggtcaacgtc gcgctcttgc tcgccgagtc cgaggatcgc ttcatcagcc agtcgcgccg
      721 cgacttctac gacgcgcgct tccgtgccgt cggcatggcc gatgtgctgc cggacggctt
      781 ccgtcgcgcc attgccaacg cgctcaccgg cgaccgcggc atcctcgcac ctcagatcgc
      841 gaccgactcg cgtggcagcc cgctgctcga caccagcggc aacgtcgcgc tcgacccgca
      901 ggcgcagctc tatccctcgc agccgctcgg ttgggcgagc ctctggcccg cgagtggccc
      961 cgaggtttgc ttcccctcac tcgggcgcaa cgcctgcacg aaccccctcg acgatagtcc
     1021 cctcgctcca gccgcgccgg cgcacagcgc gcccatcgat cctcaaatcg gctgggaagt
     1081 gcagaagttt ctcgtggcgt ggaccatcgg gtacatcaaa gccaacgaga agagccagtg
     1141 gctcgatcaa ctccgcatgt ttcgcggcgg cgcgaacccc gacccagggc tcggcgatca
     1201 ggtcgaatgg gaggaccccg tgtccggcac cgtgtaccac gccgcctcct acggtaagga
     1261 gtgcttctac ggcacgggcg ccgactgcac gggcggcaag ctcgtggaga agggcatcgc
     1321 ggcgcgcgtg ctcgagtatg caaacgaagt tacggccagg ggttacctgc tcgacgaagc
     1381 gacttacccg gccagcgacg gcagtggtga aacgcccgcg caccccgccg gctacacgca
     1441 gttcgggcac gccgtcgtct tgcgccagcc cgacgggacg cccatcgtgc gccccgatcc
     1501 ggccgtacgc ggcgtggtga acggcagtct ggtcacgaat caagcctgcg accagaacca
     1561 ggatccgagc tgcaagccgc tctccgtcac ggacaaccac tacgcgtacg agctccaggg
     1621 ctataagtcc gtgccggact tcatctggct cgcctcggac gtgtatggcc tcctcggcac
     1681 gcccacccag aagggcactt actgagtgga gtgctccgac agcgacagca cgttgccgtc
     1741 ggggtcctcg aaccacgcga cgcgcgcgcc gctcggcgcg cgccaaatgc cggccgcgtc
     1801 ctgctccatg cccgggtagc gccgaaattc gatacccgcc tgcacgagct gcgcgaccgc
     1861 ttcgtcgatc cgttcgacgt gccagccgag caccgtgaac ggttgcggct cgaggtcggg
     1921 cacgcgcgtg atgcggatcg gcaagtcgtt ccccttcacg tcgagcgcga aatcgttacg
     1981 gaacacgcga gcgagcccca agcgcccgac gtaaaacgcc tccgcgcgat cgaggtcacg
     2041 cgccgacacg aacgccatcg tctgaccttg aaatatcatg ccagtctcct cgtcactcga
     2101 ctcacacgct tcgctgcaca gcgtcaacga cctcgattag catcgctctt cgtgggcgac
     2161 gtcaagcgcc attacgccga gctcctcggc cccgtttaca cttggtacac gtcggttggg
     2221 ggtgaccccg tcgcccgcgc cgccgcgtgg ctcgagcgac atggcctcct cacgggaacg
     2281 cgttacctcg atctcggcgc ggggtcgggg gcgcacgcgc tggcgctcct tcgcgccggc
     2341 aaacgggtga cggcagtgga cttcgaccct gcgctgctcg gcgagctccg cgccgctggc
     2401 gagccgtacg ctgagctcct cacgctacac gcggcggatt tgtcggcgtt cctccgctcg
     2461 gcgacgagcg cggacttcga cctgatcctg tgtgcgggcg atacgctgac gcatttgccg
     2521 agcttcggcg acgtggacga gctcgtgcgc gagagcgcgc gctgtctcga cgcccgcggg
     2581 cgcttggctg tcgcgtatcg cgattcgagt cgcttcgcgg ccgaaggcgt ggagcgcttc
     2641 atcgaggtcg ctcgcgacgc caagcgcacg ctgcattgct tgctcgagcc gctcgacgcc
     2701 gagcacctgc gcgtcaccga cctcgtcacc gaagtcggtc cggacggccc acgcacgcgc
     2761 ctcggcgact acgtgaagct ccggatcccg cccgaacgcc tcgtgaaggc cgcaggcgcc
     2821 gtgggactcg agctcaccga gcgcgccgac gagcgcggca tgacgacgct ctgcttccgc
     2881 aaagcctgaa cgcgggactt acgcccccgt agcgctactc cgcggccgag tggccgagct
     2941 cgagcgcgcg ctccgactgg agcgccagcg gacgcacgag tgtgtccggc ggcgccggca
     3001 ggaaagacgc gtggacgctc tcgcgtgcgg ccgcgacgag cacgcgattg cgaccagcgc
     3061 gcttggcggc atagagaccg cgatcggcgc gagcaatcag ctccgacatg ctctcgtcgg
     3121 gctcgcgcgc ggcgatgccg gcgctcagcg tcactcggac gggcaagtcc acgacgctgg
     3181 ccgccgcaat cgattgccgg atgcgctcgg ccacgcgccg cgcggcgtcg gtgcccgcct
     3241 cgcgcagcac gacgacgaac tcctcgccgc cgtaacgacc gactatgtcg ctcgggcgca
     3301 ggtgatcgcg caagagcagg gaggcagcgt gtcgagggtc gcggaggggt ggtggctcga
     3361 gctcaatttc acggctggtc tccgctgtgc gggggcgtac gcccgtgcgt tgagcaaacg
     3421 atgtgccacg caaaactcgc gtccggtttt cgatacttcg ccccagagac gcggtgcgtg
     3481 gaacggcgcg ggcaaggcat tttgaccaca accgtcaaag tcttggcgct gtccagggaa
     3541 atggatccca aacttcaggt ttcaactcat ttgccgatca cgggatcagg atggctctgc
     3601 ctgcaacgac atcttcacgc gccccgctgt cggtggctgc gctgcagatc gtgcaggcgt
     3661 cgctgcgcga gaacgtcgcg ctctcgacgc tcgccgggct cgccgagagc gatccggcgt
     3721 ttgcgattcg cgtgctttcg ctcgtcaaca gcgcggcttt cggcggcgga cgcaagattg
     3781 ccgacgtgaa acaggcgacg agcctgctcg gcgtgcgcgg cctgcgcaat atcgggctca
     3841 atctcgctct caccgacatg gtgccctggg gtgagagcgg caacctcttg ctcatcgcgt
     3901 gcttgcgccg ggcgacggcg tgccggctgc tcgcagaagc agcgggcgcg cgcgacctcg
     3961 acggctattt cacgacgggg ctcttcctcg acgtgggcct gttgagccgc gcgcgcgccg
     4021 acgcgagcgg caccgaagag gtcgtgcggt tacccgcgca gcaccgcgcg atcttcgagc
     4081 gttcgctcgg cttggtggac cacgccgagc tcggctccac gctcgcctcg gagttctatc
     4141 tctcgcagga agtgacggag gccatcgcga gtcaccacga cgcgacccct cccgtcgccg
     4201 atctcgcgcg catcgcctgg gtggccgagc gcgtcgccgc gcgcttcgaa gcgggcaacg
     4261 ccgcgctgct cgtcgaagag gcgcggaccg ccgccgccct gctcggcttg agcgcggctc
     4321 gaaccgacga agtcatgaag caggtgccgg ctctggccgc ggcggccgcg cacgggctcg
     4381 gctgcgagaa cgtcgacgaa aagctcgtgg gcgcgacgct cgtcgacgtg aaccggggcc
     4441 tcgccgagct gaaccagagc tacgaggtga tggtgcggcg gctcgaagct ctgatcgcgg
     4501 agaaggaaga gctcgccaag aacctggcgg aagccaaccg tcggctcgag acgatggcga
     4561 tgagcgaccc gctgacgggc ctcgccaatc gccgcgccgt cgaagctgcg ctcgcacgcg
     4621 atctggcgcg cgccgatcgc gacggccgct ggctatcgat cgtgacgctc gacgtcgatc
     4681 atttcaagca cgtcaacgac acgcacggcc acggcggcgg cgaccaggtg ctcgtcgtgc
     4741 tcggcaatct cttgcgcacg gccttgcgcg cgggcgatct cgcgggccgc atcggcggcg
     4801 aggaattctt gacgattttg ccggacaccg acggcgacgg cgcgctcgtg gcggccgaac
     4861 gtttgcgcaa acgtatcgag gccgaacgcg tcgtactctc gagcggcgag ctcaccttca
     4921 cttcgagcct cggcgtcgcc tcgatcaagg gacccgggtg cgtgcgtgcg gcgacggccc
     4981 tcgtggaaaa ggcggacgcc gcgctctatc aagccaagcg cagcgggcgc aatcgcgtcg
     5041 tgcgcgcggc ctagctcagg gtcagcccgc cgcgagccag ccgcgttcca tcaagccgag
     5101 cagcgcgcgc gccgtctcga ggtccgtacc cgacgcggcg tcgagcgcgc cgccgaacgt
     5161 gcggccgcga aaggcgattt cgatccaatc gaggtcctcg ggcgcgagat cgcgcaggcg
     5221 cccgggcagc gtcttcggca ggctcaagac ggcgtcgtgc gggggcagcc gttcgcgcag
     5281 cgtgccgagc tcgtcgagct ggcggaagcc ttccatcaag acttccgtcg cactcaagtc
     5341 gagcggctcg gcgaacgcgc gatcctcggg cggatcgagc gcgaactggc cacgcgtgaa
     5401 gttgagcagg cggtacacgg ccttgccggg agtcagatcg gggctcgtgt tgatctcggc
     5461 gtgccggatg cgaccgagat cgagatagag ccgaccggtg ctctcggcgt tgcgcagcac
     5521 gagcacgccg ctcttcttcg aagtggagaa gagttgcatc aggtcgggga gcgggatctc
     5581 ttccaggctg ccgctcatcc gcggcggctc ctggctcgcg ggtaactcgt tcgtgcgggg
     5641 gcggaccgcc ttttgggtcg cgttgtcgag gagcgagcgc ctgccctcca cgggcgaggt
     5701 ggcgtccgat ccgaccacac gcaaaatact cgtcccgatg agaacgcggt caccctcgtt
     5761 gaggttcgcc ttctcgatgc gttcgccgtt gacgaacgtg ccgttggtcg agccctggtc
     5821 ctcgaccgac agcacgccgc ccgacaggcg gaagatggcg tgctttcgcg agaccatctc
     5881 ttcgaccagg accatgtcga ggtcgctcga gcggccgact acgacctcct cgccctcgct
     5941 caggggaaac tcgccccctt ggtacttgcc cgagacgaaa cggagtgcgt agcggcggcc
     6001 gtgctcgccc gacttttcgg tcttacgggg actcaccatg ctgggtcgct cgacgtggct
     6061 cctcagtcgc agcctatcgc ggcacgcgtc gcaacgcgag tggtcagtcc cgagggcgac
     6121 cgttggtgct cccgcccgcg gccccaaagg cctcgccggc agtacggttg gccggcgagt
     6181 cgagcgccga agacgcgccg agcgcggccg agagcagccc gccggcggaa tcaatcacgg
     6241 gctcggcggc cgcatcgggc gcgaccggta gaatgacggt gaaggtcgag cccaggccgg
     6301 ggcgggttgc aacgtcgatc cgaccgccca cttcggcgac cacgcgctgg ctgatggcga
     6361 gaccgagccc ggttcccttg tccttcgtgg tgacgaaggg gacaaatagg ttcttcatca
     6421 cctggggtgc aatgcccggc ccttcgtcgc ggacggcgat ttcgacgaag gtggccggct
     6481 cacggccgcc agaatggcgc tcttcccgct tgcggctgct gacgtagacg gtcccgccga
     6541 gtcccatcgc ctgagacgcg ttgcggatga gattgatcaa aacttggcgt agctgctcgg
     6601 cgtctgcccg gacgcggggc aaatcggggg caagatccat gtgcgcgtcc ggcacctcgg
     6661 cgcgatcgga cgcgagcagc ttcagcgtac ctttgactac cgtgttcacg tcgatggcgc
     6721 ccacgtcgcc cttcgacggc cgcgcgtagt cgagcaccga cccgacgacc cggtcgagcc
     6781 gctccacctc ttccaggatg atgccgagaa attcgcgctc cggcgcgccg aggtgctcgg
     6841 cgctctgcgc gtcgccgagg agctgggcgg cgcccttgat ggcgccgagc ggatttttga
     6901 tctcgtgcgc gagacctgcc gccatctgcc cgagcaccgc cagccgatcg cgctcctgca
     6961 tgcgccggta ctgcttggag ttctccatca cgacgccgat ctgaacggcg agcggctcga
     7021 gcaccgccaa gtcgtcgggc gggaacgcgt cgcgcgcgcg gtcgtcgatc acgagcaaca
     7081 agccgcggag ctcgcgatcc tcgccgcgaa tcgcgagcac ggccgcttgt ttgaacgggc
     7141 cgaacacctc cgacgcggct agcactcgtt cgtcggcgga ggcttctcgc tgctggccgg
     7201 agcggcggcg ttccacgatg cggagggcca cttcctcgag cgagacgctc ggcgtgtgca
     7261 cgagccgctc caagagcggg cccgcggtcg caacctccac acgggcgggt gccgggggac
     7321 cgaacgaggc cgcgagcgcg aaatccgagc cgcccggatc acgcaggtag agcgcggcgc
     7381 cggtcgcgcg ccgcgaaccc tcgagcgccg ccatgacgat ctcctgcatt tcaccgggct
     7441 ggagcacgtg caagaggcgc gcgcgggcgc gcgacaccga gcgttcgagg tcgacgcgct
     7501 cgcgcaagaa gacgcgactc acgtagcctt cggcacgttc gcgcaacggc tcgaacagca
     7561 ccaagatcac gatcgccgcg aggatggcgc cgagatacat cacctcgaag ccgccgaaga
     7621 gcacgacgaa gacgtagaaa atcccggcga gcgagaacgc gagcgccgtc gagacgagca
     7681 gcttcacgag cacgtcgtaa agatcgacga gccgttcgcg aatgagcgac tcggagagca
     7741 cgaacaggaa cacgatcgcc agcacggcgc tcacgggcgg cagcggcgcg ccgatgaacc
     7801 ataaaaaatc ggccagactg aacgaagccg cgagcgcgcc gatcagcacg aggaagcgaa
     7861 cgcggcgctg caccgcgcgc gaaccgctgc gctcaccgcg ccgccacaag gaccagagtc
     7921 cggccgcgat gaagccgaac acgtaaatga agacggcgct ccggacgatg ccgttcgagt
     7981 gctgcgtgag cacgaagacg agcatcggga taccgacgcc gagcgtcacg cgcggtaagg
     8041 acgacggccg ctccgtctcc ggcaaaatgg cgccgaaaaa ctgcaccgcg aattgcggca
     8101 ggagcacggc gagcaccgac gtgaagcgcg cccacaagtc gctccgcacg acgtgataga
     8161 gccactgcgc gaggtaccag agcccgatgt ccgccgcgag gccggcaaag tagacctgtg
     8221 gcctgcgcac ccggccgcgc agcaagattg aaacggcgat ggtcagcgcg agcacgccgc
     8281 agaagagcga cgtgcgcgtg cgcagatcca tggccgcgag gttaccacta cgggcgcaaa
     8341 cgcgccgagg gatagggcgc gtgagcctcc gcagccgccc gccgctcgga ctcgcagcga
     8401 ctaagcgccg tacaggccgc gctcggcaat ccgagcccgt acgcgctcgg gcacgagcca
     8461 ggcgagttcg cgctcggcgt ccagatcgcc tcgccgggcc aagagctcac gcacgtgcgt
     8521 cgacgaaacc tcgggcagca gcgcggggcc gagctcgggg cgttcgaagc cacggcgggt
     8581 gagcacgaac ggaggcgcga gctcgctcac gcgcgcgaag tcgtgccagc gcgccgtctc
     8641 cggcagcacg tcgctgccga cgacgagacg cagcggctcg tcgggccgtt cgctgtgcag
     8701 gcgctcgagt aagcgcaccg tgtagttcgg gcgaggcagc tctgcttcga gcacggagac
     8761 ctcgacgcgc ggtaggtcgg caaagcacac ccggcagagc tcgacgcgct cttcgaacgc
     8821 gctgagcggt ttcgcaaacg cgtgcgcgta cacgggcgcg acgaccaggc gctcgaagcc
     8881 gccgacaccg agcacgtacg cggcggcgag caggtgcgcg acgtgcggtg gatcgaagct
     8941 gccgccgaag accgccgtcg tcatgagacc cggaggttca tcgttagcgc aaagctcagc
     9001 gctcgaccaa cgtgccgaag agcgccacgc cgcccgcggt gaaaactatg tcgaacaccg
     9061 ccatcaggcg aaagaagtcg ccgagctcac cgagcggcgt gccgcccaag agctcgcgcg
     9121 tggcggcgac ggcggcgagc agcgtgggag atatcagcgg aaacagcacg atggcgagca
     9181 ggagatcgcg cgcggccgtg cgcacggtca tcgagccgaa gagcgtgccg gccgccgcga
     9241 caccgggcag cgccgtgagc gcgatgcaag cgagcccgag cccgtagcga tcgaggtcga
     9301 gcgagaagaa gagcgccgtc agcgggatca cgaccacgct gatgagcagt agaaaaatca
     9361 gaatgccgag cagcttcccg acgaagagcg cgctccgcga gagcggcgcc acgagcaaac
     9421 cgtcgagtgc cccttcctca cgctcgcgct gccaggtgcg accgagggcg agcacggccg
     9481 cgaacgtgat cgacagccag atgacgccgg aacccacgat gcgcgccgag ttcggcccgc
     9541 cgaaaagcga cagcgaagcg agcacgacca ggagcagggc aaaaaagctg ctcgtgacga
     9601 cgacttcacc cgtgcgcgcc tcgatgcgga ggtccttgga gagcaccaag agcgcttggg
     9661 aagtccaccc cggcagccgc cgcgcctcac cggccgggcc gcggccgagg gcagcttcct
     9721 gcatgccggg catcgtacta tggtccggcc ggccatgcct agcttccgcg tcgagaacgt
     9781 cttcgagtgc agtgaggaga cgttctggga aaaagtgttc ttcgacgcgg agtacaatcg
     9841 ccgccttttt tacgatgaat tgcactttgc ggactggcgg gagctcgagc ggaaagacga
     9901 gggcgaacgg gtgcaccgct tcgtcaaagc gcagccgccg atggccgatt tgcccgggcc
     9961 gctcaaggcg gcgatcggcg acggcgcggg ctacgaggag cgcggggtgt tcgtgcgggc
    10021 gacgcgccgc tacgacgcga acgtgcagcc gaatcgcctg agcgacaaag tcaacgtgac
    10081 gctgattttc cgcacggagc cgctcgac
//
LOCUS       DATIML010000388         2657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4701641, whole genome shotgun sequence.
ACCESSION   DATIML010000388 DATIML010000000
VERSION     DATIML010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4701641"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..460
                     /locus_tag="VLJ38_06740"
     CDS             146..460
                     /locus_tag="VLJ38_06740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39243.1"
                     /translation="MRFEREPDGTFYAWGNLENLPPPLNTGEGFFRAALERKVIIVPG
                     AFFDVDPGQRRVGRASRFLHHARFSFGPSESVLTTALERLAELVKAPPPATTARASTA
                     TT"
     gene            complement(453..1643)
                     /locus_tag="VLJ38_06745"
     CDS             complement(453..1643)
                     /locus_tag="VLJ38_06745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39244.1"
                     /translation="MPSLTRRLLLAVLALSAFACQDDFVPQSAIHGLRVLAVRPEPAS
                     GSPGATVHLELLFADSRVPDPAAMSPMAPMPPVSIAWLGGCHNPPGRQYYACLPALRR
                     LANNPALGDASAAAPEFASGPTFDETLPEDILSAAPKLPSDPVHYGVSYVFFAACIGD
                     IGVDGASEFPLTCKDGGVPVGPSGFVIGFATIYSYAGAENQNHNPVLASLGFDGSPVF
                     AASPDALAELPVVTDMGAAGETGAPSDVTSPDCTVAGGVTGSGTALKCCQNDDDCAGV
                     TFSHAAACSVNHVCAPVIGACGGSGCPGFRIAPLLEPASLESVTGGNEIVWASYYATL
                     GAFENPGRLVVDRSNGVAENYTEIWKPPPPDGSGKDRTARVWATLNDQRGGATWGFFD
                     VVVR"
     gene            complement(1643..>2657)
                     /locus_tag="VLJ38_06750"
     CDS             complement(1643..>2657)
                     /locus_tag="VLJ38_06750"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSU39245.1"
                     /translation="PDDPGAGAPDIGPGIARPVRVFDHSSTFFQPALYTEMGLEPTSR
                     LKVVTGVRADFTYENSRVDVSPRMTARYELIPGRHATTLKAGSGLFFQPPGLGDIVLA
                     DNPKELRSQRSWQNSLGAEQRFSDHLLLSVEGFYNLLDNLIVRGVNAQGVPAYNNYGT
                     GRIYGMEVMLRYSEDERFFGWVSYTLSRSERVYQPGQPSQLFYLDQPQILTLLGSYVL
                     GRGWEIGTRFRYVTGNLYTPCVGLGPGSPPGIYSSTQTSYLCLNGPQNSERLPAFHEL
                     DVRIDKHWVFGSFTLGVYLDVINVYNRVNPDFIAYNFDFTQSRPQTGSLPFIPSLGIR
                     GEF"
BASE COUNT          434 a          877 c          932 g          414 t
ORIGIN      
        1 cgttcctcga cggcggcggc tcgcggccgc tccagcgcgc ggcggtcccg ctcctcgacc
       61 cggcgcacgc cctcgccgag acccaggccc tccaggccgc cttccggcgc aagcgcgacc
      121 tcctggtcga gggcgcgcgc tcggcgtgcg cttcgagcgc gagcccgacg gcacgtttta
      181 cgcctggggc aatctcgaaa atctgccgcc gcccctcaac acgggcgagg gcttcttccg
      241 cgccgcgctc gagcgcaagg tcatcatcgt tcccggcgcc ttcttcgacg tcgaccccgg
      301 ccagcgccga gtcggccggg cttcgcgctt tctgcaccac gcgcgcttca gcttcggacc
      361 gagcgagagc gtgctcacga ccgcgctcga acggctcgcg gagctcgtca aagccccacc
      421 gcccgccacg acagcgcgcg cgagcacggc gactacctga cgaccacgtc gaagaatccc
      481 caggtcgcgc cgccgcgctg atcgttcagc gtcgcccaca cgcgtgccgt gcggtctttg
      541 ccgctcccgt ccggcggcgg cggcttccaa atctccgtgt agttttcggc gacgccgttc
      601 gagcggtcga ccacgagccg gccgggattt tcgaacgcgc cgagcgtcgc gtagtagctc
      661 gcccacacga tttcgttccc gcccgtcacg ctctcgagac tcgcgggctc gagcagcggc
      721 gcgatacgaa atcctgggca tccgctgccg ccgcacgccc caatcaccgg cgcgcacacg
      781 tggttcaccg agcaagccgc cgcgtgcgag aacgtgacgc ccgcgcagtc atcgtcgttc
      841 tgacaacact tgagcgccgt gccggagccg gtgacgccgc ccgccacggt gcagtcgggt
      901 gacgtgacgt cgctcggcgc gccggtctcc ccagctgcgc ccatgtccgt cacgacgggg
      961 agctcagcga gcgcatcagg gctcgcggcg aacacggggc tgccgtcgaa gccgaggctc
     1021 gcgaggacgg ggttgtgatt ttggttttcg gcgcctgcgt acgagtagat ggtcgcaaag
     1081 ccgatcacga agccggaggg tccgacgggc acgccgccgt ccttgcacgt gagcgggaac
     1141 tcgctcgcgc cgtcgacgcc gatgtcgccg atgcacgccg cgaaaaacac gtacgagacg
     1201 ccgtagtgca ccgggtcgct cgggagcttc ggcgcggcgg agagaatgtc ctcggggagc
     1261 gtctcgtcga aagtcggacc gctcgcaaac tcgggagccg cggccgacgc gtcgccgagc
     1321 gcagggttgt tggccaggcg ccgtaaggcc ggcaaacacg cgtaatactg ccgtcccggc
     1381 gggttatggc agccaccgag ccaagcgatg ctcacgggcg gcatgggggc catgggcgac
     1441 atcgcagccg ggtccggcac gcggctgtcg gcgaacagga gctcgaggtg caccgtcgcg
     1501 ccggggctgc ccgacgcggg ttcggggcgc acggcgagta cccgcaagcc gtgaatcgcc
     1561 gactgcggca cgaagtcgtc ctggcaagcg aacgccgaca acgcgagcac ggcgagcagc
     1621 aaacgacgag tgagcgatgg catcagaact ctccgcggat cccgaggctc ggaatgaaag
     1681 gcaagctgcc cgtttgcggc cgactctgag tgaagtcgaa gttatacgcg atgaagtcgg
     1741 ggttgacgcg gttatagacg ttgatgacgt cgaggtagac gccgagcgtg aacgagccga
     1801 acacccagtg tttgtcgatg cgcacgtcga gctcgtgaaa ggccggcagg cgctcgctat
     1861 tttgcgggcc gttcaggcag aggtagctcg tctgcgtgct gctgtagatg ccggggggcg
     1921 agcccgggcc gaggccgacg cacggcgtgt agaggttgcc cgtgacgtaa cgaaagcgcg
     1981 tgccgatttc ccacccgcgt ccgagcacgt agctgccgag cagcgtgagg atctgcggtt
     2041 gatcgaggta gaatagctgc gacggctggc ccggctggta cacgcgctcg gagcgcgaca
     2101 gcgtgtaaga tacccagccg aagaagcgtt cgtcttcgct gtagcgcagc atgacttcca
     2161 tgccgtagat gcggcccgtg ccgtaattgt tgtaggcggg caccccctga gcgttcacgc
     2221 cgcgcacgat caggttgtcg agcaggttgt aaaaaccctc gaccgagagc agcaggtggt
     2281 cgctgaatct ttgctcggcg ccgagcgagt tttgccacga gcgctgtgaa cggagttctt
     2341 tggggttgtc ggcgaggacg atgtccccca gccccggcgg ttgaaagaag agtcccgagc
     2401 cggccttgag cgtcgtcgcg tgacggccgg ggatgagctc gtagcgcgcc gtcatgcgcg
     2461 ggctcacgtc gacgcggcta ttttcgtagg tgaagtcggc gcggacgccg gtcacgacct
     2521 tgaggcgcga cgtgggctcg aggcccattt ccgtgtagag cgcgggttgg aaaaaggtgc
     2581 tcgaatggtc gaacacgcgc acggggcgcg cgatgccggg tccgatgtcg ggcgcgccgg
     2641 cgccggggtc gtcgggg
//
LOCUS       DATIML010000389         5903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5278714, whole genome shotgun sequence.
ACCESSION   DATIML010000389 DATIML010000000
VERSION     DATIML010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5903
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5278714"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..618)
                     /locus_tag="VLJ38_06755"
     CDS             complement(<1..618)
                     /locus_tag="VLJ38_06755"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39246.1"
                     /translation="MKACEKCKLKFPDDTAACFICGSSLAPIKDPRIGSIVNGRYLLE
                     AAVGEGGMATVYAARHRLVDRPCAVKIMNAALAKNEVIRERFRREAKAAQKLAHPNII
                     EIFHQGELPDGSLFLVMELLEGETLADLLFRGRIPLERALPIAIQIARALARAHDLEV
                     IHRDLKPENVFLAEWPEQSDFVKLLDFGIARSMQDVRLTGAGEVFG"
     gene            817..1302
                     /locus_tag="VLJ38_06760"
     CDS             817..1302
                     /locus_tag="VLJ38_06760"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HSU39247.1"
                     /translation="MFGFVFGTLCLVGLVRLVGRGRWGRRYGYYGHHGHWHGHHRGFG
                     PRGALNAVLARLDTAPGQEKVIGQAVSDFIDQARAQGREVRDTRRIVADALRAERLDE
                     ARLNEVFGRHDAALDHVRRAGVDALRKVHEALDERQRRILGDLLDSGVHGFGYGRGAC
                     C"
     gene            1321..1596
                     /locus_tag="VLJ38_06765"
     CDS             1321..1596
                     /locus_tag="VLJ38_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39248.1"
                     /translation="MRRGIGIVLLALGTVAGFGFGFARLGGYCPHGYGCYGPGLYGHG
                     RWGDGERNLEDRAADACVRAAERVLSERRTTPGAPAPAPATPPPAAP"
     gene            1636..2319
                     /locus_tag="VLJ38_06770"
     CDS             1636..2319
                     /locus_tag="VLJ38_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU39249.1"
                     /translation="MTTRVLVVDDDVRLYELIASYLGQNDVSPAHAPNGRRALELLER
                     EAYDAVLLDVMMPELDGLAVLKKIRERWPALPVLMLTAKGDETDRVVGLELGADDYLA
                     KPFSPRELLARLRAVLRRVNPDLGRQRLSAANVVAEVETRTVHVAGKPVELTGLEFDL
                     LVCLLRRAGQVVPRASLLAQAGRSDVTVSDRTVDVHISHLRKKLGDDPPRLIRTVRGV
                     GYVLSKDGT"
     gene            2354..3709
                     /locus_tag="VLJ38_06775"
     CDS             2354..3709
                     /locus_tag="VLJ38_06775"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU39250.1"
                     /translation="MRHYRSFRHGPHGAPGWHDGYCEVPRRARLQRRLFRWFGVTIAV
                     TALVAGLVVGVFGPGAHVRDDFGRIEALAAKEFARAWPDPSDRRALAENIARAFRADV
                     TTTDAAGHVLEHTGRPCLDGQYSLRVAGPSGVLGFVHACVPARHYSPHVMLLALVTCA
                     AMLWAAAGAIARRLTRPLDQLVRVTRAIGAGDLAARVRLGRHQTGEVGALADSVNEMA
                     ARIERQLKEERTLLAAVSHELRSPLARLRLLVELARTESRAERLDEIERELVGLDALI
                     GKLLASSRLEFGELRLETLTAAKVAARALEVAGLAPELLRDESDGALVEVDPTLVGRA
                     LGNLLENAARHGGGAERLALSVTHVDGRGREVRFSVEDAGPGFEPEVLKRAFEAFYSA
                     RSSESVKESGSLGLGLALVARIARAHGGRAYAENRGAGTTGSDSSGARAVLALPVAGT
                     P"
     gene            3732..4622
                     /locus_tag="VLJ38_06780"
     CDS             3732..4622
                     /locus_tag="VLJ38_06780"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSU39251.1"
                     /translation="MAMSRRQPALKVAIPRPSNVPLRLGRVGLIAAVGFAAGILWPRL
                     AGLRLVPQLPTPAASAPDLSGAPPDDQAAASAVASSTPAVAPKPPEPLAPGVQPPVVG
                     EAQVTSCRDAGGGKLEHCDNVDFDRVARARLSSVDDCPAAQRVSGVLSLGFELDFTSE
                     RVAHVSSGKATSLADEPLKAVLDCYRQSFSNVSLVAIPHEHQHYTIFYRVELAAAPPE
                     AAPAASAAPVAVTPASGNATVSWETALVHGTPEKDGKVVARVLSGTRVAVTGRSGDWY
                     RIKYDARGREGWVFRTAVGM"
     gene            4642..4986
                     /locus_tag="VLJ38_06785"
     CDS             4642..4986
                     /locus_tag="VLJ38_06785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39252.1"
                     /translation="MKDDSPKGADIALIHGKTADGEGLRIIRQRHDRLEIGAVRPLKQ
                     GTPIVGEVVSLTPRPEFPLLCDVKVELEAPAAANDRMEASRHGPAQVATAAYRDNWDR
                     IWPAKGEPELAN"
     gene            5157..>5903
                     /locus_tag="VLJ38_06790"
     CDS             5157..>5903
                     /locus_tag="VLJ38_06790"
                     /inference="COORDINATES: protein motif:HMM:NF013340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39253.1"
                     /translation="MQTRLLNQLAPFLIATGIPLALMSCSSGDDDSSKGTGGTGMAVT
                     GGTGASGGTGGSTGGTGTGGTGTGGSATGGTGTGGSTGGTGTGGSATGGTGGSGGAAL
                     GGMGGKAMAGGGGTGGKATAGAGGTNGGASSGGAPGGGMGGKSAGGASSGGANGAGAG
                     GGAGTGGGGTFTLASTDQMDGAKFDGKFTCNGGTLGGGVNPELHWSGSPAGAMSFAIT
                     FIDTTIGADNSMGQHWAMYNIPAAVMEIAQG"
BASE COUNT          916 a         2001 c         2078 g          908 t
ORIGIN      
        1 gccgaagacc tcgcccgcgc cggtgagacg cacgtcttgc atcgagcgtg cgatgccgaa
       61 gtcgagcaat ttgacgaagt cgctctgctc gggccactcg gccaagaaca cgttctcggg
      121 cttgagatcg cggtggatca cctcgaggtc gtgagcgcgc gcgagagccc gcgcgatctg
      181 gatcgcgatc ggcagggcgc gctcgagcgg gatccggccc cggaacaaaa ggtccgcgag
      241 cgtttcaccc tcgagcagct ccatcaccaa gaacaaactg ccgtcgggga gctcgccctg
      301 atggaagatc tcgatgatgt tcggatgcgc gagcttctga gcggccttgg cctcgcgccg
      361 gaagcgctcg cgaatgacct cgttcttcgc gagcgcggcg ttcatgatct tcacggcgca
      421 cggccggtcg acgagccggt gccgcgccgc gtaaaccgtc gccatgccgc cctcgccgac
      481 ggccgcttcg agcaggtaac gcccgttgac gatgctgccg atgcgcggat ctttaatcgg
      541 cgcgagcgac gagccgcaga tgaagcacgc ggccgtgtcg tcggggaact tcagcttgca
      601 cttttcgcaa gctttcatgg gcggtctctc atcatcgtca caaagcggcc cagcttccat
      661 ccgtaggctc gggccagctc atttaatgta gtcaattcaa agacttatca actcaacatt
      721 gcttcacaaa tccccgagca cggccttcac acgcggggac gacgttcttt tcacggacgc
      781 ccgccgagcg ggacgaccgg aaggagtgat gcggaaatgt tcggattcgt gtttggaacg
      841 ctgtgcctgg ttggtctggt ccgcctggtc gggcgagggc gctggggccg gcgctacggt
      901 tactacggtc accatgggca ttggcatggg catcaccgcg gctttggtcc gcggggcgcc
      961 ctgaacgcgg tgctcgcgcg tctcgatacc gcgccgggcc aagagaaagt cattggccaa
     1021 gcggtctcgg acttcatcga ccaggcgcga gcccaaggcc gcgaagtgcg cgatacgcgg
     1081 cgcatcgttg ccgacgcgct ccgcgccgag cgcctcgacg aggcgcgctt gaacgaggtg
     1141 ttcggccggc acgacgccgc gctcgaccac gtccgccgcg cgggcgtcga cgcgctgcgc
     1201 aaggtgcacg aagcgctcga cgagcgtcaa cgccgcattc tgggcgactt gctcgactcg
     1261 ggtgttcacg gcttcggtta cggccgcggc gcttgctgct gaaagagagg agtgaggatc
     1321 atgcgcagag gaatcggcat cgtgctactc gcgctcggaa ccgtcgcggg cttcggcttc
     1381 ggtttcgcgc gcctcggcgg gtactgcccg cacggttacg gctgctacgg accggggctc
     1441 tacggccatg gccgttgggg cgacggcgag cgaaacctgg aagatcgcgc cgccgacgct
     1501 tgcgtgcgcg ccgccgagcg cgtgctttcg gaacgcagga ccacgccggg cgcgcctgcg
     1561 cccgcacctg cgacgccgcc acctgcggct ccgtaacggt gacgaaagtg cgcgggtgat
     1621 aggctcggtg acgcgatgac gacccgcgtg ctcgtagtag acgacgacgt gcggctctac
     1681 gagctcatcg cgagctacct cggacagaac gacgtgagcc cggcgcacgc cccgaacggg
     1741 cgccgggctc tcgagctact cgaacgcgaa gcgtacgacg ccgtgctgct cgacgtgatg
     1801 atgcccgagc tcgacgggct cgcggttttg aagaagatcc gcgaacgctg gccggcgctg
     1861 ccggtcttga tgctcacggc caaaggggac gagaccgatc gcgtcgtcgg gctcgagctc
     1921 ggcgcggacg attacctcgc caaaccgttt tccccgcgtg agctcttggc gcggctccgc
     1981 gccgtgctgc ggcgggtcaa tcccgatctc ggccggcagc gcttgtcggc cgcaaacgtg
     2041 gtcgccgagg tcgagacgcg cacggtgcac gtcgccggca agcccgtcga gctcaccggg
     2101 ctcgagttcg atttgctggt gtgcctcttg cgtcgcgccg gccaggtggt gccgcgcgcg
     2161 agtttgctcg cgcaggcagg ccgctcggac gtgacggtga gcgatcgcac cgtcgacgtg
     2221 cacatctcgc acctgaggaa gaagctcggc gacgatccgc cgcggctgat tcgcacggtg
     2281 cgcggggtcg gctacgtgct gtcgaaggac ggcacgtgaa cgtccacgca cgcgacgtgc
     2341 gcggaggccc gcggtgaggc actaccgttc gtttcggcac gggccgcacg gcgcgcccgg
     2401 ctggcacgac ggttactgcg aggtgccgcg tcgcgcgcgc ctgcagcggc gcttgtttcg
     2461 ctggttcggc gtgaccatcg ccgtgacggc tctggtcgcc ggactcgtcg tgggcgtctt
     2521 cgggccggga gcgcacgtgc gcgacgactt tggccgcatc gaagcgctcg ccgcgaagga
     2581 attcgcgcgc gcctggccag acccgagcga tcgccgcgcg ctcgccgaaa acatcgcgcg
     2641 cgcgttccgc gcggacgtga cgacgacgga cgccgcgggt cacgtcctcg agcacacggg
     2701 acggccctgc ttggacggcc agtactcgct ccgcgtcgca ggaccaagcg gcgtgctcgg
     2761 cttcgtgcac gcttgcgtgc cggcgcgtca ctactcaccc cacgtgatgc tgctcgcgct
     2821 cgtcacttgc gcggcaatgt tgtgggcagc tgccggcgcc atcgctcgga gactcacgcg
     2881 tcccctcgac cagctcgtgc gcgtgacgcg cgcgatcggc gcgggtgatc tcgctgcgcg
     2941 cgtgcggctc ggccggcatc agaccggcga agtgggagcc ctcgccgatt ccgtcaatga
     3001 aatggccgcc cgcatcgagc ggcagctcaa agaagagcgc acgctgctcg cggcagtctc
     3061 ccacgagctc agaagtccgc tcgcgcgcct gcggctactc gtcgagctcg cgcgtaccga
     3121 aagccgcgcc gagcgcctcg acgaaatcga acgcgagctc gtcgggctcg acgcgctcat
     3181 cggcaagctg ctcgcgagct ctcggctcga attcggcgag ctcagactgg agacgctcac
     3241 ggccgccaag gtggccgccc gcgcgctcga ggtcgccgga ctcgcgcccg agctcctccg
     3301 cgacgagagt gacggcgcgc tcgtcgaggt cgatccgacg ctcgtcgggc gcgcgctcgg
     3361 taacttgctc gaaaacgccg cacgtcatgg cggcggcgcc gagcggctcg cgctcagcgt
     3421 gacccacgta gacggccgcg gtcgcgaggt ccgtttcagc gtcgaggacg cgggaccggg
     3481 cttcgagccc gaggtgctga agcgcgcctt cgaggccttc tattcggcgc gctcgagcga
     3541 aagcgtcaaa gaaagcggct cgctcggcct cggactcgcc ctcgtggccc gcattgcccg
     3601 cgcgcatggg ggtcgcgctt acgcggagaa tcgcggtgcg ggtacgactg gcagcgacag
     3661 ctcgggggcg cgcgccgtgc tcgcgctacc cgtggccgga acgccgtgat aggaaatcgg
     3721 cgcgtttccc catggcgatg tcgcgccggc agcccgcgct caaagtagcc attccccggc
     3781 cgagcaatgt gcccttgcgg ctcgggcgcg tcggtctgat cgcggccgtg ggcttcgcag
     3841 caggcatcct ctggccgcgc ctggcggggc tacggctcgt gccgcagctg cccacccccg
     3901 ctgcctcggc tccggatctg agtggcgcgc cgcccgacga tcaggcggct gcctccgccg
     3961 tcgcttcgtc cacgcccgcc gttgcaccga agccacccga gccgctcgct cccggcgtcc
     4021 agccccccgt cgtcggggag gcgcaggtga cgagctgtcg cgacgcgggc ggcggcaagc
     4081 tcgagcactg cgacaacgtc gacttcgatc gcgtggcgcg cgcgcggctt tcgtccgtcg
     4141 acgactgccc ggccgcgcaa cgcgtctcgg gagtgctctc gctcggcttc gagctcgact
     4201 tcacgagcga gcgcgtcgct cacgtgtcga gcggcaaagc gacttcgctc gccgacgaac
     4261 cgctcaaggc cgtgctcgac tgctaccggc agagcttctc gaatgtctcg ctcgtcgcga
     4321 tccctcacga gcaccagcac tacacgatct tttatcgcgt cgagctcgcc gccgcgccgc
     4381 ccgaagccgc accggccgcg agcgccgctc ccgtcgccgt cacccctgca agtgggaacg
     4441 cgaccgtgag ttgggagacg gcgctcgtgc acgggacgcc ggaaaaggac ggcaaagtgg
     4501 tcgcgcgcgt gctctcgggc acgcgcgtcg ccgtcacggg ccgaagcggg gattggtacc
     4561 gcatcaagta cgatgcgcgc ggccgcgagg gctgggtgtt ccgcacggcc gtgggtatgt
     4621 agacgtgcta cgctcgtcgt gttgaaggac gactcgccca aaggcgccga catcgcgctc
     4681 atccacggca agaccgccga cggtgaggga ctccgcatca tccgtcagcg tcacgaccgc
     4741 ctcgagattg gcgccgtgcg cccgctcaag cagggcacgc ccatcgtcgg cgaagtcgtg
     4801 agtctcacgc cgcggcccga gttcccgttg ctgtgcgacg tcaaagtcga gctcgaagcg
     4861 cccgcagccg cgaacgatcg catggaagcg tcccgtcacg ggcccgcgca ggtggccacg
     4921 gccgcgtacc gcgacaattg ggatcgcatc tggcccgcaa agggcgagcc cgagttggcg
     4981 aactgagcgc gaccgctcgc gagcaccggc cgactctgca gcgagtcagt tcgcgccact
     5041 cttgcagaac tgagggttaa ggaggttttg gttctcagta cggtgcgaaa agtgcaccgg
     5101 cacgtgagat atttctcgcc gactggaaga cggggccatg tggcagaacg tgcgacatgc
     5161 aaacgcgctt gctgaaccag cttgccccct tcttgatcgc gaccgggatc cccctagcgc
     5221 tcatgagctg ctcgtcgggc gacgacgata gctccaaggg caccggcggc accggcatgg
     5281 ccgtaaccgg cggcacgggc gcgagcggcg gcacaggtgg atcgacgggt gggacgggca
     5341 ccggcgggac gggcaccggc ggttccgcga cgggcggcac aggcacgggg ggctcgacag
     5401 gcggcacagg caccggcggt tccgcgactg gcggcaccgg cggcagcggc ggtgcggcac
     5461 tcggcggcat gggtggcaag gccatggccg gtggcggcgg cacgggtggc aaagcgacgg
     5521 ccggcgcagg tggcacgaac ggcggcgcat cgagtggtgg cgcaccgggt ggcggcatgg
     5581 gcggcaagtc ggcgggcggc gcgtcgtccg gcggcgcgaa cggcgcgggc gccggcggcg
     5641 gcgcgggcac gggtggcggc gggacgttca cgctcgcaag cacggatcag atggacggcg
     5701 ccaagttcga cgggaaattc acttgcaacg gcggcacctt gggcggcgga gtcaatccgg
     5761 agctgcattg gagcggctcc cctgccggcg ccatgtcgtt cgcaatcacc ttcatcgaca
     5821 cgaccatcgg agccgacaat tcgatggggc agcattgggc aatgtacaac atcccggcgg
     5881 ccgtcatgga gatcgcccaa ggc
//
LOCUS       DATIML010000390         4391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3256143, whole genome shotgun sequence.
ACCESSION   DATIML010000390 DATIML010000000
VERSION     DATIML010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4391
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3256143"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            310..834
                     /locus_tag="VLJ38_06795"
     CDS             310..834
                     /locus_tag="VLJ38_06795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39254.1"
                     /translation="MYPDFEELLAELNSAGAEYLIGGAHAVAFHARPRATKDLDLYIG
                     PGRRNAARVVRAIAKFFGGAAPSYVSVEHLSDPTVIIQLGVAPVRVDLLPRLFTIDFS
                     TAWKRRVLAPFGEVPANYLALEDLMNEKRHFARTQDLADLEQLERAARHGRAVKPRRA
                     RTSKRPARKGGERR"
     gene            complement(874..2346)
                     /locus_tag="VLJ38_06800"
     CDS             complement(874..2346)
                     /locus_tag="VLJ38_06800"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding family 9-like protein"
                     /protein_id="HSU39255.1"
                     /translation="MIRRLPIALLALTLAFGCSKKKHHVDPEEQKAKLSQYILDQAPE
                     IANKLDIKFGDKATLLGYDLDRPQPLKPGQKVKLTFYWQVSEPISGGYKLFTQVLDAS
                     GEKLLNIDRNAPLRPTKKSKNGGLPVSAWEPGKVYVDQQTFHVPKANTDTIQVITGFF
                     TKEGHLPITAGPKDSQDRAIVASFSVQPSEAAMKAKLESVPEISVDRLEKTDKLTIDG
                     KLDEAAWKSATVLPLVDVASGEPPKDSPVNGSARLLWNDTNLYVGFEVQEANIVGGFP
                     KNAKDPHLWTKDTVEIMVDPDGDGDNDDYYEIQVNPQNLVFDTQYDHYNDPKTDPDGP
                     FGHEEWSAKLKSAVTVDGTVDKPEDADKGYVVEAAIPFKSFSKAKKVPPALGDSWRLN
                     FYAMKDNAGVAWSPILGQGNFHKASRFGRVRFTAKGWTPPPVSEDAGAPAASGSAAAP
                     PVPSGSAAAAPPVASAKAPVASAKPAASSAKPPAPAGSAH"
     gene            complement(2343..3026)
                     /locus_tag="VLJ38_06805"
     CDS             complement(2343..3026)
                     /locus_tag="VLJ38_06805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39256.1"
                     /translation="MGITSAFVLAWTLGACAGPSEATKVDDSLAAYVLSDVPSDVQTR
                     ALVDFGGAVHLVGWDLSPADTAAPGSTVHLKLYWRSVKKLSPGWTLFTHVSVADAPKP
                     YAFDDVGTLRQKLPPSEWTPGNVYVDEQDITVPTTQAPVFTLSVGIGHEAVQVAGGEV
                     DGLSGSRLEILSGLSDGHDRAIVARLATGVTPGQKSDARGDRRRGVPPSFKGRAPVRP
                     AGTDLKEKP"
     gene            complement(3032..>4391)
                     /locus_tag="VLJ38_06810"
     CDS             complement(3032..>4391)
                     /locus_tag="VLJ38_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HSU39257.1"
                     /translation="AGEQFVKICHDELVKMMSFEGDPITLAPSGRTGVMMVGLQGSGK
                     TTTAAKIARWLDKLGKKPLLVAADMQRPAAVEQLQVLGAQINVPVFNLPGQSPLEICK
                     AAPAEAARTGCDVIVYDTAGRLAIDEPLMQELAAIKSAVEPGNILLVVDAMIGQDAVK
                     TAKSFNERLGITGVVLTKLDGDARGGAALSVKEVTGAPIVFAGMGETTDKLEPFRAEG
                     MAGRVLGMGDVVGLIQDFENVVDEKQAEKDAQRMMRGEFTLDDFLSQIRMLQKMGSLS
                     DLVEKIPGLSGMVPPGAAQQLDDRELVRIEAMIQSMTPDEREDPNSLVREPSRAKRIS
                     RGSGQTAEAVSELVQKFLFMRQMMGGFGQNLGVMGNIPGLRNIAMARNAKTAMQGGGF
                     PGIPGMGFPGMGGMGFPGMGMPGGMGEAAPKMRVLSKAEKNARKNQRKRERDARKKGK
                     RR"
BASE COUNT          659 a         1447 c         1445 g          840 t
ORIGIN      
        1 cacaagccgg cctcacgcgc gccaaggcgc aaaccgacac gtgcgccacg aaccagggcg
       61 aactcgctcg gcgctaccac gtggcacgct gaggctcctc gatacggtgc acgtgataga
      121 cttacttcat ggcggttcga acccagcgac accgcgacgg tcacggccga acgtggcagg
      181 tatcgctggt gccgaccagt cacgccgcgg aagctgattt cgaattctgg tatcggatgc
      241 ccgcgcaggc gcgcgtcgct gcggtctatg cgtgcacgga gagtgcactc agagctcagg
      301 gcaaaacgca tgtaccccga cttcgaagag ttgctcgccg agttgaactc agccggcgct
      361 gagtatttga ttggcggtgc ccacgcggtc gcgttccacg cacgtccgcg cgccacgaag
      421 gatctcgacc tctacatcgg tccggggcga cggaacgccg cgcgggtcgt acgcgccatc
      481 gcgaagtttt tcggcggcgc cgcgccaagc tacgtcagcg tcgaacatct gagtgatccg
      541 acggtcatca ttcaactggg tgtcgcgccg gttcgtgtcg atctcttgcc gcggctcttc
      601 accatcgatt tcagcacggc ctggaaacgt agggtcttag cgccgttcgg cgaagtgccc
      661 gcgaactacc tggcgctcga ggatctcatg aacgagaagc ggcacttcgc gcgcacgcag
      721 gatctagccg acctcgagca actcgagcgg gcggcgcgtc acggccgcgc ggtgaagcct
      781 cgacgcgcgc ggacttcaaa acgccccgcg cgtaaaggcg gtgagcgacg ctgacggcga
      841 gtcgcgctcg ccgtcaggtg tcgtactcgc gcgtcagtgc gcggagccgg cgggcgccgg
      901 cggcttcgca ctcgaagcgg ccggcttcgc gctcgcgacg ggcgctttcg cgctcgcgac
      961 gggcggcgcc gcggctgcgg accccgacgg aacgggcggc gccgccgcgc tgccggacgc
     1021 tgcgggtgcg cccgcgtcct cgctgacggg cggcggcgtc caacccttgg ccgtgaagcg
     1081 cacgcgaccg aagcgggacg ctttgtggaa gttgccttgg ccgaggatcg gcgaccaggc
     1141 gacgcccgcg ttgtctttca tggcgtagaa gttcaagcgc cagctgtcgc cgagcgcggg
     1201 cggcaccttc ttcgctttgc tgaagctctt gaacgggatc gcggcttcga cgacgtagcc
     1261 tttgtcggcg tcttcgggct tatcgacggt gccgtcgacc gtcacggcgc tcttgagctt
     1321 tgccgaccac tcttcgtgac cgaagggacc gtcggggtcg gtcttcgggt cgttgtagtg
     1381 atcgtactgc gtgtcgaaca ccaggttctg cgggttcacc tggatctcgt agtagtcgtc
     1441 gttgtcaccg tcgccgtccg ggtcgaccat gatttcgacg gtgtccttgg tccagaggtg
     1501 cggatctttc gcgttcttcg ggaacccgcc cacgatgttc gcttcctgca cctcgaagcc
     1561 gacgtagagg ttcgtgtcgt tccagagcag gcgcgcgctg ccgttgacgg gcgagtcctt
     1621 cggcggctca ccactcgcga cgtccactag tgggagcacc gtggcgctct tccaagccgc
     1681 ctcgtcgagc ttgccgtcga tcgtgagctt gtcggtcttt tccaggcgat cgacggagat
     1741 ttcgggcacg ctctcgagct tggctttcat ggccgcctcg ctcggctgca cgctgaagct
     1801 cgcgacgatc gcgcgatcct ggctgtcctt cgggcccgca gtgatcggca ggtgcccttc
     1861 cttggtgaag aacccggtga tgacctggat cgtgtccgta ttcgccttcg gcacgtggaa
     1921 ggtttgctgg tccacgtaga ccttgccggg ctcccacgcc gacaccggca ggccgccgtt
     1981 cttgctcttc ttggtcggcc ggagcggcgc gttgcgatcg atgttcaaaa gcttctcccc
     2041 cgaagcgtcg agcacctggg tgaagagctt gtagccgccg ctgatcggtt cggagacttg
     2101 ccagtagaag gtgagcttga ccttctgccc gggcttgagc ggctgcggcc gatcgaggtc
     2161 gtaaccgagc agggtcgcct tgtcgccgaa cttgatgtcg agcttgttgg cgatctcggg
     2221 tgcttggtcg aggatgtact gcgagagttt cgccttctgc tcttccggat cgacatggtg
     2281 cttcttcttc gagcagccga aggcgagcgt cagagcaagt aaagcgatgg gcaaacggcg
     2341 gatcatggct tctccttcag atcggtcccc gcaggtctca cgggtgcgcg gcccttgaac
     2401 gacggcggta cgccgcgcct ccggtcacca cgcgcgtccg acttttggcc cggcgtaacg
     2461 cccgtggcaa gccgcgcgac gatcgcgcga tcgtggccgt ccgaaagccc gctcaggatc
     2521 tcgagccgcg agccggacaa gccgtccacc tcgccgccgg cgacttgcac ggcctcgtgg
     2581 ccgatgccga ccgacagcgt gaatacgggc gcctgcgtgg ttggcaccgt gatgtcctgc
     2641 tcgtcgacgt agacgttgcc gggcgtccac tcgctcggcg ggagcttctg ccgcagcgtc
     2701 cccacgtcgt cgaaggcgta gggcttcggc gcgtccgcca cgctcacgtg cgtgaagagc
     2761 gtccagccgg gtgaaagctt tttgacggaa cgccagtaaa gcttcaggtg cacggtcgac
     2821 ccgggcgcag ccgtatcggc gggcgacaga tcccagccga ccaagtgcac ggcgccgccg
     2881 aagtccacga gcgcgcgcgt ttgcacgtcg ctcggcacgt ccgagaggac ataggcggcg
     2941 agcgagtcgt cgaccttcgt cgcttcgctc gggcccgcgc acgcaccgag cgtccacgcg
     3001 agcacgaaag cggaagtgat acccacggac ttcatcggcg cttgcctttc ttgcgcgcat
     3061 cgcgttcgcg cttgcgctga tttttgcgtg cgttcttctc ggctttgctc aggactcgca
     3121 tcttcggcgc cgcctctccc ataccgccgg gcatgcccat gccgggaaag cccatgccac
     3181 ccatgcccgg aaaacccatg ccgggtatgc ccggaaaacc gccgccttgc atcgctgttt
     3241 tggcgtttcg cgccatggcg atatttctga ggccggggat gttccccatc acgccgaggt
     3301 tctgtccgaa tccgcccatc atctggcgca tgaacaggaa tttttggacg agctcgctca
     3361 cggcttcggc cgtttggccc gagccgcgcg agatgcgctt ggcgcgcgag ggctcgcgca
     3421 cgagcgagtt cggatcctcg cgctcgtctg gcgtcatcga ttgaatcatc gcctcgatgc
     3481 gcacgagctc gcggtcgtcg agctgttgcg cggcgccggg cggcaccatc ccggaaagtc
     3541 cagggatctt ctcgacgagg tccgagagcg accccatctt ctgcagcatg cggatctgac
     3601 tcaagaagtc gtcgagcgtg aactcgccgc gcatcatgcg ctgcgcgtcc ttttcggcct
     3661 gcttctcgtc gacgacgttc tcgaagtcct gaatcaggcc gacgacgtca cccatgccga
     3721 gcacgcgccc ggccatgcct tcggcgcgga acggctcgag cttgtcggtc gtctcgccca
     3781 tgccggcgaa cacgatcggt gcgcccgtga cttccttcac gctgagcgcg gcgccgccgc
     3841 gggcgtcgcc gtcgagcttg gtgagcacga cgcccgtgat gccgagccgc tcgttgaagc
     3901 tcttggccgt tttcacggcg tcttggccga tcatggcgtc gacgacgagc aagatgttgc
     3961 ccggctcgac cgcgctcttg atggcggcga gctcctgcat gagcggctcg tcgatcgcga
     4021 ggcgacccgc ggtgtcgtag acgatgacgt cgcagcccgt gcgcgcggct tcggcgggcg
     4081 cggccttgca gatttcgagc ggcgactgtc cgggcagatt gaagacgggg acgttgatct
     4141 gcgcgccgag tacctgaagc tgctcgacgg cggccgggcg ctgcatgtcc gcggcgacga
     4201 gcagcggctt tttgccgagc ttatccagcc agcgcgcgat cttggccgcc gtggtcgtct
     4261 taccggagcc ctgcaggccc accatcatca cgcccgtgcg accgctcggc gcgagggtga
     4321 tggggtcgcc ctcgaagctc atcatcttga cgagctcgtc gtggcagatc ttcacgaact
     4381 gctcgccggc g
//
LOCUS       DATIML010000391         2631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5567386, whole genome shotgun sequence.
ACCESSION   DATIML010000391 DATIML010000000
VERSION     DATIML010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5567386"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(378..1907)
                     /locus_tag="VLJ38_06815"
     CDS             complement(378..1907)
                     /locus_tag="VLJ38_06815"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSU39258.1"
                     /translation="MRRGILVLAFCGFGCSDGSGKQPPPGPQPAGLSTDTIAAFDAAV
                     DPLRQKFDVPGVAVALVSRGETVFAQGYGLRDLESGESVTPDTVFRIGSITKSFSSAL
                     IATLVDDGALTFETRVKDIDPSFQLPTAELTDKMTIHELLGMGTGLGEASAFWWDFPT
                     AGDLLATLPELDVIGPEGTFFYNNEVYASGTYLALEAAKPDGDLATAYARLVNERLFA
                     PLGMSPAAVTDDPSTLGSDVAASYTLSLVGGPDAPDRAGFVPMASVAPAGAVATNVTS
                     LARYAAMQLAQGVAADGTRVVSAENLAVTHAPQTRITPAPAPWLTDYAAGWAVGKEGG
                     VNVVWHDGALDGYSATLRLLPDDDLALVILTNGWNGENLCLALEEKLMQLVYGHADLG
                     PDYFTAAYATARKQLAAAAAALALEAPIDPHAVAPLLGDWGHELSVELDDANELFLVA
                     PGSRSRVVRADKLFKTDGVYLLAGGPLVGHEVRVAATDGHSEFSVLDPASGEPILSLA
                     R"
     gene            2088..>2631
                     /locus_tag="VLJ38_06820"
     CDS             2088..>2631
                     /locus_tag="VLJ38_06820"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HSU39259.1"
                     /translation="MPVEFLESQLLRENGFRHAFFTRHGGVSEGPYASLNFSRSVGDE
                     PERVEKNLALAAEALGVGTERIFFLSQVHGTGAVVLGGDERRETVVEMEGDALASRAP
                     GLACAVRTADCVPVLVGDLKSGAAAAIHAGWRGIVRGVLEAGVAKLQEIAGGDVELVA
                     ALGPHIRLWAFEVGEDVADEI"
BASE COUNT          430 a          864 c          912 g          425 t
ORIGIN      
        1 atctcacggc cgatgaacgg gtctttgggg cgcatccgat ctaccctact tcgccagtct
       61 tgggggggct agatcacgat cggcagatga agcgccgagc tacgtgagaa accggcgagg
      121 ccggcggacg gccgtctgtc ccgatgggcg cagtcgcaag gcgtcgtcgc ttcgtgttca
      181 gggagcggcc gtgaacgcct cgcgatactc gcgcgctcac ccgcggcgat ccgccggtct
      241 cgccggcttt tttcgtggcg agtggcggcc gctgccgatc gagatctggc ccaggcaaag
      301 actgttggag tcgtcttcag atcgatacca aaattacctg gagcgtccca ggctcaagcg
      361 ctcgccgacg ttacacgtca ccgcgcgagc gacaggatcg gttcgccgct ggccggatcc
      421 agcaccgaaa actcgctgtg cccgtcggtc gcagctacac gcacctcgtg tccgaccagc
      481 ggaccgcccg ccaaaagata gacgccgtcc gtcttgaaga gcttgtcggc ccgcacgacg
      541 cgactccggc tgcccggtgc cacgagaaag agctcgttcg cgtcgtcgag ctcgacgctg
      601 agctcgtgac cccaatcgcc gagcagcggg gcgaccgcgt gggggtcgat gggcgcctcg
      661 agcgcgagcg cggcggccgc tgcggcgagc tgtttgcgcg cggtggcgta cgctgccgtg
      721 aagtaatcgg gcccgagatc ggcgtgtccg tacacgagct gcatcagctt ttcttcgagc
      781 gcgaggcaga ggttctcgcc gttccagccg ttcgtgagga tgacgagcgc gaggtcgtcg
      841 tccgggagca gacgcagcgt cgcgctgtag ccgtcgaggg cgccgtcgtg ccaaacgaca
      901 ttgacgccgc cttctttgcc gacggcccag cccgcggcgt agtcggtgag ccacggcgcg
      961 ggcgcgggag tgatccgggt ctgcggcgcg tgcgtgacgg cgagattttc agccgaaacg
     1021 acgcgcgtgc cgtcggccgc gacgccctgc gcgagctgca tcgccgcgta acgcgcgagg
     1081 ctcgtgacgt tcgtggccac ggcgccggcc ggcgcgacgc tcgccatcgg gacgaaaccg
     1141 gcgcggtccg gcgcgtccgg acccccgaca agcgacagcg tgtacgacgc cgccacgtcg
     1201 cttccgagcg tcgaggggtc gtccgtgacg gccgcggggc tcataccgag cggcgcgaac
     1261 aagcgctcgt tcacgagccg cgcgtaagcg gtcgcgagat cgccgtccgg cttcgccgct
     1321 tcgagcgcga ggtacgtccc gctcgcgtaa acttcgttgt tgtagaagaa ggtgccctcg
     1381 ggaccgatca cgtcgagctc tggcagggtc gcgagcaggt cacccgcagt tgggaagtcc
     1441 caccaaaacg cgctcgcttc gccgagcccc gtgcccatgc cgaggagctc gtgaatcgtc
     1501 atcttgtcgg tgagttcggc cgtcggcagc tgaaagctcg gatcgatgtc cttcacgcgc
     1561 gtctcgaacg tgagcgcgcc gtcgtcgacg agcgtcgcga tcagcgctga gctgaaggat
     1621 ttcgtgatcg agccgatacg aaacaccgta tcgggcgtga cggactcacc gctctcgagg
     1681 tcgcgcaggc cgtagccttg cgcaaacacg gtctcgccgc ggctcacgag cgcgacggcc
     1741 acgccgggca catcgaactt ttgacgcaag ggatcgaccg ccgcgtcgaa ggccgcaatc
     1801 gtgtccgtcg acagcccggc aggctgcggc ccgggcggag gctgtttgcc gctcccgtcc
     1861 gaacaaccaa aaccgcaaaa agccaagacc aaaatgccac gtctcatgcc gcactccctt
     1921 tcgaccacac caacctgagc ggacgctaca cgcgccgcca gcgaccggac agcagtaatg
     1981 gctggccacg gcgttcgacg atcacgtttt cgtcaggcgc gctgaagatt gtcgatctcg
     2041 atcggcgtca gcttgcgcag ccggcgcgag aacgatagac cggccgtatg ccggtcgaat
     2101 ttctcgaaag ccagctcttg cgagaaaacg ggtttcgcca tgcctttttc acccgtcacg
     2161 gcggcgtctc cgaaggtccc tacgcttcgc tcaacttctc gcgttccgtc ggggacgaac
     2221 cggagcgtgt cgagaagaac ctggcgctcg cggcggaggc gctcggagtg ggcacggagc
     2281 gcattttctt tctgtcgcag gtgcacggca cgggcgcggt ggtgctcggc ggcgacgagc
     2341 ggcgcgaaac cgtggtggag atggaaggcg acgcgctcgc gagccgcgcg cccggtctcg
     2401 cgtgtgcggt ccgaacggcc gattgcgtgc cggtgctcgt gggggatctg aagagcggcg
     2461 ccgcagcggc cattcacgcg ggctggcgcg gcatcgtgcg cggcgtgctc gaggcgggcg
     2521 tcgcgaagct ccaagagatc gcgggcggcg acgtggagct cgtggccgcg ctcgggccgc
     2581 acatccggct ctgggccttc gaggtgggtg aagacgtcgc cgacgagatc g
//
LOCUS       DATIML010000392         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2678450, whole genome shotgun sequence.
ACCESSION   DATIML010000392 DATIML010000000
VERSION     DATIML010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2678450"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..638
                     /locus_tag="VLJ38_06825"
     CDS             <1..638
                     /locus_tag="VLJ38_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39260.1"
                     /translation="RRKLGLERLAQPRRVGIRAHFRRPRDAPPLSDIEIFLRPGYELY
                     VTPLPDDELLVAALAHEHVAAGDLRHGFQQWVSREPVLRGWLDGAIQTSELRGRAPLV
                     SSTRGREPAGLILLGDAAASVDPITAGGLSLALVSAELLARHALELLTGSLLARRRFE
                     RARAGVVRVHRWLGAGVLALAGRPRLAELARRGFSAHPSAMEALVAFAGGT"
     gene            640..1563
                     /locus_tag="VLJ38_06830"
     CDS             640..1563
                     /locus_tag="VLJ38_06830"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prenyltransferase"
                     /protein_id="HSU39261.1"
                     /translation="MNAVARALALVRLGRPVFLLGGFALYGLGALAAVSRGYRFDGVA
                     FALGQLAVSSIQLMTHYCNDYYDYEADKANQTPTRWSGGSRVLVKGELPRGVALRAAL
                     VVGSLSPLAACALLVHSPDRVGSVALLFVMQALAWSYAGPPLSLHTRGLGEPVTALVV
                     PLFTPLAGFLVQSTRLELFPITLSAPLVFLQIAMLVTIGFPDYAGDRAVGKVSWVVLL
                     GPERSARVVQGSILLAFLLAAAGAGLEVPPRVALGFLALSPLAAVQCFRLARGDHRRE
                     SAWESLAFTSVALFFLSMVAELVGLAAASAR"
BASE COUNT          173 a          573 c          567 g          306 t
ORIGIN      
        1 tccggcgcaa gctcgggctc gaacgcctcg cccaaccgcg ccgggtcggg atccgcgctc
       61 actttcggcg cccccgcgac gcgccgccgc tctccgatat cgagatcttt ctgcgtccgg
      121 ggtacgagct ctacgtgacg ccgctgcccg acgacgagct gctcgtggcc gctctcgctc
      181 acgaacacgt ggccgcgggt gatctgcggc atggctttca gcagtgggtc tcgcgcgagc
      241 ccgtcttgcg cggttggctc gatggcgcga tccaaaccag cgagctccgc ggccgagcgc
      301 cactcgtcag ctcgacgcgg ggcagagagc cggcgggatt gatcttgctc ggcgacgccg
      361 ccgcgagcgt ggatccgatc acggccggcg gactcagctt ggcgctcgtg agcgccgagc
      421 tgctcgcgcg gcatgcgctc gagctcttga cgggcagttt gctcgcgcgc cgccgtttcg
      481 agcgggcgcg cgccggggtc gtgcgcgtgc atcgctggct cggcgccggg gtgctcgcgc
      541 tcgcgggcag gccgcggctc gccgagctcg cgcgccgagg cttcagcgcg catccgagcg
      601 cgatggaggc gctggttgcg ttcgcggggg gcacctgaga tgaacgcggt cgcgcgcgct
      661 ctcgcgctcg tccgcctcgg ccgccccgtg ttcctgctcg ggggatttgc gctgtacggc
      721 ctcggggcgc tcgcggcggt gagccgcggg tatcgcttcg acggcgtcgc gttcgcgctc
      781 gggcagctcg ccgtgagctc gatccagctc atgacgcact attgcaacga ctactacgac
      841 tacgaggcgg acaaggcgaa tcagacgccg acgcgctggt cgggtgggag tcgcgttctc
      901 gtcaaaggcg agctgccacg cggcgtggcc ctgcgcgccg cgctcgtggt cggttcgctc
      961 tcgcccctcg ccgcgtgtgc gctgctcgtc cactcgcccg atcgcgtggg cagcgtggcg
     1021 ctcctcttcg tcatgcaagc gctcgcgtgg tcgtatgcgg ggcccccctt gagcctccac
     1081 actcgtggac tcggcgagcc ggtgacggcg ctggtcgttc cgctcttcac gccgctcgcg
     1141 ggttttctcg tgcaatcgac gcgcctggag ctttttccga tcaccttgag cgcgccgctc
     1201 gtgttcttgc agatcgccat gctcgtcacg attggtttcc ccgattacgc gggcgatcgg
     1261 gcggtcggca aagtgagctg ggtcgtgctg ctcgggccgg agcgctccgc gcgagtcgtc
     1321 caaggctcga tcctgctcgc gtttctgctc gccgccgccg gcgcaggact cgaggtgccg
     1381 ccccgcgtcg cgcttgggtt tctcgcgctc tcgccgctcg ccgccgtgca atgttttcgc
     1441 ctggcgcgag gcgatcatcg tcgtgagtcc gcttgggaga gtctcgcctt cacgagcgtc
     1501 gcgctcttct ttctgagcat ggtcgccgag ctcgtggggc tcgcggctgc ctcggcgcgc
     1561 tagcgcggca tcacgatgga ttcctcgatc acgcgcacct cgccgtcgcc gagctcgaa
//
LOCUS       DATIML010000393         3618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1237527, whole genome shotgun sequence.
ACCESSION   DATIML010000393 DATIML010000000
VERSION     DATIML010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3618
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237527"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(237..1124)
                     /locus_tag="VLJ38_06835"
     CDS             complement(237..1124)
                     /locus_tag="VLJ38_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-xylosidase"
                     /protein_id="HSU39262.1"
                     /translation="MIEAAMFWNEPNNLSHWDFELDPGWQTFGGMVKLAASAVRAEAP
                     RLTRVLGGISPIDPTFISTMGERGVLAELDAVAVHGFPLDWNHWQIHDWPARLDEIRR
                     VTHMPVWISEVGVSSFGAEEVQEFGLTKSHELLRGQAPRIHWYSLLDLPRAWPATTRH
                     REAEGSSYYRHFYMGLLREDGERKRAFDAFARLGGELGICQWFHFEDPRLERAVGWLK
                     ELGVKHLRTGLSWADSHRPNATAWFDRLVKALEPFDVTVTFCFTPESRGLRPHHTSPP
                     VDAQEFADFCAEMARRYAT"
     gene            complement(1121..2188)
                     /locus_tag="VLJ38_06840"
     CDS             complement(1121..2188)
                     /locus_tag="VLJ38_06840"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39263.1"
                     /translation="MKLVIFGLTVSSSWGNGHATLWRGLCRALAARSHHVVFFERDVP
                     YYRSTRDLFALEGGDLVFYEDWDEVSERAARELADADAAIVTSFCPDGERAAELVLER
                     ARGVRVFYDMDTPVTLASLEQGVRPPYLPAQGLGGFDLVLSFTGGKALDELQSRLGAR
                     RVAPLYGHVDPDVHRPTRPDPDLRADLSYIGTYSGDREAAVDELFFGPARALPSRRFV
                     LAGSMYPDDSRWPENVQHRQHLAPNAHPALFCSSRITLNVTRSTMARFGHCPSGRLFE
                     AAACGAALASDWFEGLDCFFAPEREIHVVRTRKDVIELLERSDQELLRSAEAARERTL
                     ACHSAAVRAESLERLLWERPS"
     gene            complement(2185..3225)
                     /locus_tag="VLJ38_06845"
     CDS             complement(2185..3225)
                     /locus_tag="VLJ38_06845"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSU39264.1"
                     /translation="MSERPRLGFIGVGWIGLSRLQALAETNRAEIVAIGDPDPAACDK
                     ARAVAPHAAIVSNYDELVQLPLDGVVIATPSGQHAEQCVRAFEHGLAVFCQKPLGRSA
                     AEVGDVMRAAKRAGRPLGVDLCYRHTAALRRLKELVTSGELGRVYAVDATFHNAYGPD
                     RAWANQREHAGGGCLIDLGVHLLDAARWLLEGPRNAIDCTSALFARGEKLGRSAQEVE
                     DMAFAELVFDDARTVRVACSWRSSFGADAAIRVACFGTNASAAFENVGGSFYDFQCEL
                     YRGTNRTVVAAPPDAWGPRALMAWVSELERGAGYSEDVHLLPVARELDLIYGRDPIGA
                     AERPAALAAARA"
     gene            complement(3222..>3618)
                     /locus_tag="VLJ38_06850"
     CDS             complement(3222..>3618)
                     /locus_tag="VLJ38_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39265.1"
                     /translation="HAGIIQRVSELTGGAFCDRVIEATGKQWPLDLSAELTKVRGRLV
                     IAGYHQDGARSVNMQLWNWRGIDVVNAHEREPARYVHGMRGAIAATLDGTLSPRRLFT
                     HTYSLAELGEALAATAERPEGFVKALVLP"
BASE COUNT          593 a         1222 c         1272 g          531 t
ORIGIN      
        1 ctcgaagaca tcatccgcca agcgctgcgc gcgctcgctc gagactggca ctaacttaag
       61 gcgccggcgc cgccgctcgt agcgggggca actctcgact tcgcccgctg atcgcgccgt
      121 tctgagcgct cgttgccgac acggagatcc gatgcagcac gaggccgcag tgcgtgagca
      181 ccgcccaggg cgccacttcc ccgaccccca cccctgctcc agccttgcct ctggctttag
      241 gtcgcgtaac gacgcgccat ttccgcgcaa aaatcggcga attcttgggc atcgaccggc
      301 gggctcgtgt gatgcggccg caggcctcgc gactcgggcg tgaagcaaaa cgtgaccgta
      361 acgtcgaagg gctcgagcgc cttcaccaag cggtcgaacc acgccgttgc gttcggacgg
      421 tgcgaatcgg cccagctcag gcccgtacgc aggtgcttca ccccgagctc cttgagccag
      481 ccgacggcgc gctcgaggcg cggatcctcg aagtgaaacc attggcagat gccgagctcg
      541 ccgccgaggc gcgcgaaagc gtcgaaggcg cgcttgcgtt cgccgtcttc ccgcaagagg
      601 cccatgtaaa agtggcggta gtaggaggag ccttcggcct cgcgatggcg ggtcgtggcg
      661 ggccaggcgc gcggcaggtc gagcagtgaa taccagtgga tgcgcggcgc ctggccgcgc
      721 aagagctcgt ggctcttcgt caagccgaac tcctggactt cctccgcgcc gaagctcgag
      781 acgccgacct cggagatcca gaccggcatg tgcgtgacgc gccggatctc gtcgagccgc
      841 gcgggccaat cgtggatttg ccagtggttc cagtcgagcg gaaagccgtg cacggcaacc
      901 gcgtcgagct cggcgagcac gccgcgttcg cccatggtgg agatgaacgt cggatcgatg
      961 ggcgagatgc cgccgagcac gcgcgtgagg cgcggggcct cggcgcggac ggcgctcgcc
     1021 gcgagcttga ccatgccgcc gaaggtttgc caccccggat cgagctcgaa atcccagtgc
     1081 gacaggttgt tcggctcgtt ccaaaacatt gcggcttcaa tcatgacggt ctctcccaga
     1141 gcaggcgttc gaggctctcc gcgcgcacgg ccgccgaatg acatgcgagc gtgcgctcgc
     1201 gcgcagcttc ggccgagcgc aagagctcct ggtccgagcg ctcgagtagc tcgatcacgt
     1261 ctttgcgcgt gcggacgacg tggatctctc gttcgggcgc gaagaagcaa tcgaggccct
     1321 cgaaccagtc gctcgcgagc gcggcgccgc aggcggccgc ttcgaatagc cgccccgaag
     1381 ggcagtgccc gaagcgcgcc atggtggaac gcgtgacgtt cagcgtgatg cggctcgagc
     1441 aaaagagcgc gggatgcgca ttcggcgcga ggtgctggcg gtgctgcacg ttctccggcc
     1501 agcgcgaatc atcggggtac atcgagccgg cgagcacgaa gcgccggctc ggcagggcgc
     1561 gcgccgggcc gaagaagagc tcgtcgacgg cggcttcgcg atcccccgag tacgtgccga
     1621 tgtaggagag atcggcgcgc aaatccgggt cgggccgggt cggacggtgc acgtcgggat
     1681 cgacgtggcc gtacagcggg gcgacccggc gcgcgccgag gcggctctgt agctcgtcga
     1741 gtgccttgcc gccggtgaag ctcagcacga gatcgaagcc gccgagccct tgcgcaggca
     1801 ggtacggcgg ccgcacgcct tgctcgaggc tcgcgagcgt gacgggcgta tccatgtcgt
     1861 agaagacgcg cacgccgcgc gcgcgttcga gcacgagctc cgcggcgcgc tcgccgtcag
     1921 ggcagaagga ggtgactatc gccgcgtcgg cgtcggcgag ctcgcgcgcg gcgcgttcgc
     1981 tgacttcgtc ccagtcctcg taaaacacga ggtcgccgcc ttcgagcgcg aacaggtcgc
     2041 gcgtcgagcg gtagtacggg acgtcgcgct cgaagaacac gacgtggtgc gagcgcgccg
     2101 cgagcgcacg acacaagccg cgccagagcg tcgcgtggcc gttgccccac gacgagctca
     2161 ccgtaaggcc gaaaatgacg agtttcatgc gcgcgcggcc gcaagcgccg ccggtcgttc
     2221 cgcggcgccg atcgggtcgc gtccgtagat gagatcgagc tcacgcgcga cggggagcag
     2281 gtgcacgtct tcgctgtagc cggcgccacg ctcgagctcg ctcacccagg ccatgagtgc
     2341 gcgcggtccc caggcgtcgg gcggcgcagc gacgacggtg cggttcgtgc cgcggtaaag
     2401 ctcgcactgg aaatcgtaga aggagccgcc gacgttctcg aacgcggccg acgcgttcgt
     2461 gccgaagcag gcgacgcgaa tggcggcgtc ggcgccgaac gaggaccgcc aggaacaggc
     2521 gacccgcacg gtccgagcgt cgtcgaagac gagctctgcg aacgccatgt cctcgacctc
     2581 ctgcgccgaa cggccgagct tttcgccgcg cgcgaagagc gccgaggtgc aatcgatcgc
     2641 gttacgaggc ccttcgagca gccagcgcgc cgcgtcgagc aggtgcacgc ccagatcgat
     2701 caggcacccg ccgccggcgt gctcgcgctg gttcgcccaa gcgcggtcgg gtccgtaggc
     2761 gttgtggaat gtcgcgtcga ccgcgtagac gcgcccgagc tcgccgctcg tgacgagctc
     2821 tttcaaacgc cggagcgccg ccgtgtggcg atagcagagg tccacgccga gcgggcgacc
     2881 ggcgcgcttg gccgcgcgca tgacgtcgcc gacctcggcc gccgagcgac cgagcggctt
     2941 ttgacagaag accgcgagcc cgtgctcgaa cgcgcgtacg cactgctcgg catgctgtcc
     3001 gctcggcgtc gcgatcacca cgccgtcgag cggcagctgg acgagctcgt cgtaattcga
     3061 gacgatcgcc gcgtgcggag ccacggcgcg cgccttgtcg caggccgccg gatccggatc
     3121 gccgatggcc acgatttcag cgcggttggt ctcggcgagc gcttgcaagc gcgaaagtcc
     3181 aatccagccc acgccgatga aacccaaacg aggccgctcg ctcacggcag caccagcgct
     3241 ttcacgaagc cctcgggtcg ctcggccgtg gcggcgagcg cctcaccgag ctctgcgagc
     3301 gaataggtgt gcgtgaagag ccggcgcggc gacagcgtgc cgtcgagcgt ggccgcgatc
     3361 gcgccacgca tgccgtggac gtagcgcgcg ggctcccgct cgtgagcatt gactacgtcg
     3421 atgccgcgcc aattccagag ctgcatgttg acgctgcgtg cgccgtcctg atggtagcct
     3481 gcgatgacca gtcggccgcg caccttcgtg agctcggcgg agaggtcgag tggccattgc
     3541 ttcccggttg cttcgatcac gcgatcgcag aaggcgccgc ccgtgagttc cgagacccgc
     3601 tggatgatgc ccgcgtgg
//
LOCUS       DATIML010000394         3083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4410892, whole genome shotgun sequence.
ACCESSION   DATIML010000394 DATIML010000000
VERSION     DATIML010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3083
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4410892"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VLJ38_06855"
     CDS             <1..201
                     /locus_tag="VLJ38_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39266.1"
                     /translation="HVPVNADVPELDVIMVDELDPHVNEIGAKGIGEIGITGMPAAIA
                     NAVYHATGKRVRELPITLDKLL"
     gene            218..1351
                     /locus_tag="VLJ38_06860"
     CDS             218..1351
                     /locus_tag="VLJ38_06860"
                     /inference="COORDINATES: protein motif:HMM:NF024869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HSU39267.1"
                     /translation="MTEITAVCRAWREAQTTGEPVWLATLARREGSSYRRPGARLVFG
                     RDGVRAGAVSGGCLEQELVRTGPWLTRHGPVCRTFDANSDDEDAPRGSGCLGRLELLL
                     EPLSGHADAALGVIDRELEAERPVALATVIASSLPQVRLGTRVLKSEQALVTQVSDPA
                     LARSLTAAVTRALAARGTRAALAEDAGATALVEVLEPPPHLFVFGAGVDALPVARLAT
                     LLGWNVTIAGTSGRASARERFIKLARLSERPLPEIVAELSRCARPLAVIMSHDYRQDR
                     ATLAALVDVPLRYLGVLGPARRTARLLDDIEAERGPLAAAVKSRIFGPAGLALGSETP
                     EEIALSIVAEAQAALKTTPRGSLREHGGKIHAPLALALQGDSS"
     gene            1348..1917
                     /locus_tag="VLJ38_06865"
     CDS             1348..1917
                     /locus_tag="VLJ38_06865"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HSU39268.1"
                     /translation="MNVACAVLAAGASARLGTPKQLLPFNGSSTLVHWAAKCACSSCC
                     SRVAVVVGARSAEVTESVRGLPVEILEGFDWREGMAASIRTAALWAVDRGADALMLCV
                     CDQPFLTAHHLNALWFASANGKRLAASYYAGKTAVPAIFPERYFGALLALRGDEGGAG
                     ILRREANVAHVAWPEGAVDVDTPTDLLSL"
     gene            complement(1945..>3083)
                     /locus_tag="VLJ38_06870"
     CDS             complement(1945..>3083)
                     /locus_tag="VLJ38_06870"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSU39269.1"
                     /translation="GERSRFGAARAGTTAMDSKRQIRYAVVGAGNIAQVAVLPAFEHT
                     HNSKLVAVISGDAEKRNALRDTYDLEFAADYAELESILERAHIDAVYVATPNALHHQF
                     VLRAAERGVHVLCEKPLALSAAECRELADTCNEHDVKLMVAYRLHFEAATLQAIEVAR
                     SGQLGALRLFSSFVSQVVRPDDVRRDARLGGGATYDLGVYCVNAARNLFGAEPTRVVA
                     ASVARLGTDDSTMAILEFPQECMAMLCVGNSTSNVSSYRIAGTEGDLRVEPAYDYAAE
                     RIHHLTVGGRTRRTVFRKSDQFAPELTYFSDCILNDREPEPSAEEAWCDARVLDAILE
                     AAESHRAVELAPYERARRPSVSQLDEVSPIKRPRTVNAPGPSAR"
BASE COUNT          458 a         1068 c         1060 g          497 t
ORIGIN      
        1 cacgtgcccg tgaacgcgga cgtgcccgag ctcgacgtca tcatggtgga cgagctcgac
       61 ccacacgtga acgaaatcgg cgccaagggc atcggtgaaa tcggcatcac cggcatgccc
      121 gccgccatcg cgaacgccgt ctatcacgcg acgggcaagc gcgtgcgcga gctgccgatc
      181 acgctggaca agctcctgtg acccccgcga ggagtgcatg actgagatca cggccgtatg
      241 tcgagcctgg cgcgaagcgc aaacgacggg tgagcccgtc tggctcgcga cgctcgcgcg
      301 acgcgaagga tcgtcctatc ggcggcccgg ggcccgtctc gtcttcgggc gcgacggcgt
      361 gcgcgcggga gcggtgagcg gcggctgtct cgagcaggag ctcgtgcgca ccgggccgtg
      421 gctcacgcgg cacggccccg tctgccgcac gttcgatgcg aactccgacg atgaagacgc
      481 gccgcgaggc agcggctgcc tgggccgtct cgagctactg ctcgagccac tgtccgggca
      541 tgccgacgct gcgctcggcg tgatcgatcg tgagctcgag gccgagcgac cggtggcgct
      601 cgcgaccgtg atcgcgagca gtctcccgca ggtgcgcctc ggtacgcgcg tgctcaaaag
      661 cgagcaggct ctcgtcacgc aagtctccga ccccgcgctc gctcgcagcc tcacggctgc
      721 cgtcacgcgc gcgctcgccg cgcggggcac gcgcgccgcg ctcgccgagg acgccggcgc
      781 tacggcgctc gtcgaagtgc tcgagccgcc cccccacttg ttcgtgttcg gcgcaggcgt
      841 cgatgcgctg ccggtcgcac gacttgcgac actgctcggc tggaatgtca cgatcgccgg
      901 tacctccgga cgcgcgagcg cgcgcgaacg cttcattaaa cttgcacggt tgtccgagcg
      961 cccgctgccc gagattgtcg cggaattgag ccgctgtgcg cgcccgctcg cggtgatcat
     1021 gtcccacgac taccggcagg atcgcgcgac gctcgcggcg ctcgtcgacg tcccgctccg
     1081 gtacctcgga gtgctcggtc ccgcgcggcg cacggcgcgc ctgctcgacg acatcgaagc
     1141 cgagcgcggc ccgctcgccg cagcggtaaa gtcgcgcatt ttcgggcccg ccggcctcgc
     1201 gctcggctcc gagacgcccg aggaaatcgc gctcagcatc gtggcggaag cgcaagccgc
     1261 gctcaagacg accccccgcg gctcactccg cgaacatggg gggaaaattc acgcgccgct
     1321 ggcgcttgcc ttgcagggag actcgtcatg aacgtcgctt gtgccgtgtt ggccgcgggc
     1381 gcatccgctc gcttgggtac accgaagcag ctcttgccgt tcaacggctc gagcacgctc
     1441 gtgcactggg cggccaaatg cgcctgctcc tcgtgttgct cgcgtgtcgc cgtcgtcgtc
     1501 ggcgcgcgct cggccgaagt cacggagagc gtccgcggcc tgcccgtcga gatcctcgag
     1561 ggcttcgact ggcgcgaagg catggcggcg tcgatccgga cggccgcgct ctgggcggtc
     1621 gatcgcgggg ccgacgcgtt gatgctctgc gtttgcgacc agccgttctt gacggcgcac
     1681 cacctgaacg cgctctggtt cgcgagcgcc aacggcaagc gccttgcggc gtcgtattac
     1741 gccggcaaga cggccgtgcc cgcgattttc cccgagcgct acttcggtgc gctgctcgcg
     1801 ctgcgggggg acgaaggcgg cgccggcatc ctgcggcgtg aagcgaacgt cgcgcacgtc
     1861 gcctggcccg agggcgcggt cgacgtggac acgccgaccg acttgctctc gctctgattc
     1921 gagcttcggc gggtcagagc gggctcagcg agcgctcggg cctggcgcgt tcaccgtgcg
     1981 cgggcgcttg atcgggctca cttcgtcgag ctggctcacg ctcggacgcc gcgcgcgctc
     2041 gtacggagcg agctcgacgg cgcgatgact ttccgccgct tccaagatgg cgtcgagcac
     2101 gcgcgcgtcg caccacgcct cttcggccga cggctccggc tcacgatcgt tcaaaatgca
     2161 gtccgaaaaa tacgtgagct ccggcgcgaa ctgatcgctc ttcctgaaca cggtgcggcg
     2221 cgtgcggccg ccgaccgtca aatggtggat gcgttccgcc gcgtagtcgt aggcaggttc
     2281 gacgcgcaga tcgccctcgg tgcccgcaat ccgatagctc gatacgttcg aggtgctgtt
     2341 gccgacgcag agcatcgcca tgcattcctg gggaaattcg aggatggcca tggtgctgtc
     2401 gtcggttccg agccgcgcga cgctcgcggc gacgacgcgc gtcggttcgg cgccgaacag
     2461 gttgcgcgcc gcgttcacgc agtagacgcc gagatcatag gtcgcgccgc cgccgaggcg
     2521 cgcgtcgcgc cgcacgtcgt cgggccgcac gacctggctc acgaacgagc tgaagagccg
     2581 cagcgcgccg agctggcccg agcgcgcgac ttcgatggcc tggagcgtcg ccgcttcgaa
     2641 gtgcaggcga tacgcgacca tgagcttcac gtcgtgctcg ttgcaagtat cggcgagctc
     2701 acgacactcg gcggcgctca gcgcgagcgg tttctcgcaa agcacgtgga cgccgcgttc
     2761 ggctgccctc agcacgaatt gatgatgcaa cgcgttcggc gtcgccacgt agacggcgtc
     2821 gatgtgcgcg cgttcgagga tgctctcgag ctcggcatag tcagccgcga attcgaggtc
     2881 gtacgtgtca cgcagcgcgt tgcgcttttc tgcgtccccg gagatgacgg cgacgagctt
     2941 cgaattgtgc gtgtgctcga aggcaggcaa gaccgcgacc tgcgcgatgt tgccggcacc
     3001 gacgaccgcg tagcgaatct gacgcttgga atccatcgcg gtagtgcctg cacgcgctgc
     3061 gccaaaacgg gagcgctcac cca
//
LOCUS       DATIML010000395         3222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2388974, whole genome shotgun sequence.
ACCESSION   DATIML010000395 DATIML010000000
VERSION     DATIML010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3222
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2388974"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VLJ38_06875"
     CDS             complement(<1..872)
                     /locus_tag="VLJ38_06875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39270.1"
                     /translation="MLAPAANGAWAKFHRIVRRAAWALGSALAASFVLGASLLLYLQS
                     ASGRRFLAKQVSELVSGELASELRIERLDVISSRRLVASRAVLTDARGRILLAVDGLA
                     AEFELSSLLAHVLFGAEVRVVVPEVRADRLEVGLYRDAHGELVLAHAFDTAKPRTKTK
                     ATRPLRLRLPHVLVRSASVHNDEPELARATTELGELTAKLEVAPGLFELGLDTRRLRI
                     AGALPVALEGALQGQLRIPGQTEASFSGALGSLPLSARFEMHGDELDLRASSSSLTPE
                     GMKKLVPAWPLLLPV"
     gene            964..2991
                     /locus_tag="VLJ38_06880"
     CDS             964..2991
                     /locus_tag="VLJ38_06880"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HSU39271.1"
                     /translation="MRAALGYVLAALACGCASPAGHRVVTAVDIDGGEAAQDPELRRG
                     IATRADATYDPSVLAKDLERIERFYRALGYYDASVRAARVTTTGSDRVRVAIVVDPGA
                     PVRIARIELPGTESLPQDAAAHLRSARTLRPGTPFDERRLHTDARAMENALADDGFAY
                     AAVSESASVSVIRKSAVVEYRVQAGPRVRIGEIRIEGLRAFDARIVRGKLLLDPGDPY
                     SRATLERARRRLYELGVFSSVDITPVLDHPDQTTVPLRVVVREGTTRSLHVGAAIEAD
                     NTRGLAGVRFGWDSRNFLGGLRKLSLDVTPSLTFYPPPSSDAKMRVLPTLQSALQFEQ
                     PGIFDARTTGFLRNELNAYPVIYADYQPGDNIVGFRELKEAVGAERPFLGGALRARTS
                     YQFQARFPHMYLGAKPEGLDTVLVFFPELVFDLDLRDDPIDPRAGAYFELSAQAAGLL
                     FGDATDVRLRPEARLYAKLGSKLTLGFRSTLGLLFPRRCDDDPTRGCYGDSLTNASAP
                     ATDSALVRDQQILLFRGFYSGGATSNRGYALNEIGPHGVLGFLAPSNINCTVPNPPVQ
                     CERPLGGLTLWELSLELRVTLSQIAGLVFFVDTSDLTREPATFRAAYPHLSTGTGFRL
                     RTPVGAVRLDAGVRVPYLQHIGEPHLPPNEGEPSTFLGLPMAVHFGLGEAF"
     gene            complement(3023..>3222)
                     /locus_tag="VLJ38_06885"
     CDS             complement(3023..>3222)
                     /locus_tag="VLJ38_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39272.1"
                     /translation="TLNTKNIWLMANNTCSYPIDCMVWNDVTEQDSRIMLAPFHTNSY
                     LLAANQPVNRVSVKVECTKMQ"
BASE COUNT          491 a         1162 c         1041 g          528 t
ORIGIN      
        1 accggcagga gcagcggcca agcggggacg agctttttca taccttcggg tgtgagcgaa
       61 gacgagctcg cgcggaggtc gagttcgtcg ccgtgcattt cgaaccgcgc gctcagcggc
      121 aagctcccga gtgcacccga aaagctcgcc tccgtctggc ccggaatgcg gagctggccc
      181 tgcagagcgc cctcgagagc gaccggcagc gccccggcga tgcgcaagcg ccgggtgtcg
      241 aggccgagct cgaagagtcc gggcgcgacc tcgagcttgg ccgtgagctc gccgagctcg
      301 gtcgtcgctc gcgcgagctc gggctcgtcg ttgtgcaccg aggccgagcg cacgaggacg
      361 tgaggcaaac gtaagcggag cgggcgagtc gctttcgtct tcgtgcgggg cttcgccgtg
      421 tcgaaggcgt gcgcgagcac gagctcgccg tgcgcgtcgc ggtagagccc gacctcgagc
      481 cggtcggcgc gcacctcggg cacgacgacg cggacctccg cgccgaagag gacgtgagcg
      541 agcagactcg atagctcgaa ctctgctgcg agcccgtcca cggcgagcag gatgcggccg
      601 cgcgcatcgg tcaagaccgc ccgcgacgcc acgagccggc gcgaggaaat cacgtcgagc
      661 cgctcgatcc ggagctcgga cgcgagctcg ccactcacga gctcactcac ttgcttcgct
      721 agaaatcgcc gaccggacgc gctttgaaga taaagtagca gcgacgcgcc gagtacgaag
      781 ctcgcagcga gcgctgaccc gagcgcccac gcggcccggc ggacgatgcg gtgaaacttc
      841 gcccacgctc cgttcgctgc cggcgcgagc atgactcgag cgagcttgac atgcgggtct
      901 cgccctcaca agctcgcccg cgcgttgaag gagcgcgctc ttgcacggcc agcccgcgca
      961 gtgatgcggg ccgcgctcgg ttacgtgctc gctgcactcg cctgcggctg cgcgtcgccc
     1021 gccggacatc gagtcgtcac cgccgtcgac atcgacggcg gcgaggccgc ccaagacccc
     1081 gagctccggc gcggcatcgc cacgcgcgcc gacgctacct acgatccgag cgtgctcgcc
     1141 aaggatctcg agcgcatcga gcgcttttat cgcgccctcg gctactacga cgccagcgtg
     1201 cgcgccgcgc gcgtcacgac cacgggcagc gatcgcgtcc gtgtcgcgat cgtcgtcgac
     1261 ccgggagcgc cggtgcgcat cgcgcgcatc gagctccccg ggaccgaaag cttgccgcaa
     1321 gacgcggccg cgcacctgcg ttcggcacgt acgctgcgcc ccgggacgcc gttcgacgag
     1381 cgccgcttgc ataccgacgc gcgcgccatg gagaacgcgc tcgccgacga cggcttcgcg
     1441 tacgcggccg tcagcgagag cgccagcgtg tccgtcattc gcaagagcgc ggtcgtggag
     1501 tatcgggtgc aggccggacc tcgcgtgcgc atcggagaga tccgcatcga ggggctgcgc
     1561 gcgttcgacg cgcgcatcgt gcgcggcaag ctcttgctcg atccgggcga tccgtactcg
     1621 cgcgccacgc tcgagcgtgc gcgccggcgc ttgtacgagc tcggcgtctt ctcgagcgtg
     1681 gacatcacgc cagtactcga tcaccccgac cagacgacgg tgccgctgcg cgtcgtcgtg
     1741 cgcgagggca cgacgcgctc gcttcacgtc ggcgcggcca tcgaagcgga caacacgcgc
     1801 ggactcgcgg gcgtgcgttt cggctgggac agccgcaatt tcttgggcgg gctccgcaaa
     1861 ctctcgctcg acgtgactcc ctccctcacc ttttatccgc cgccctcgtc ggacgcgaag
     1921 atgcgcgtcc tgcccacgct ccagagcgcg ctgcagttcg agcagccggg catcttcgac
     1981 gcgcgcacga ccggcttcct ccggaacgag ctcaacgcct atcccgttat ctacgcggat
     2041 taccagccgg gcgacaacat cgtcggcttc cgcgagctca aggaagccgt cggcgccgaa
     2101 cgtcccttct tgggcggggc gctccgcgcg cgcacgagct accaattcca agcgcgcttt
     2161 ccgcacatgt acctcggcgc gaagccggag ggcctcgaca ccgtgctcgt cttctttccg
     2221 gagctcgtgt tcgatctcga tctgcgcgac gatcccatcg atccgcgcgc gggtgcctac
     2281 ttcgagctct cggcccaagc ggccggcttg ctcttcggcg acgcgaccga cgtgcgcctg
     2341 cggcccgaag cgcggctcta cgccaaactc ggctcgaagc tgacgctcgg ttttcgctcc
     2401 acgctgggac tgctcttccc gcgccgctgc gacgacgacc cgacgcgcgg ctgctacggc
     2461 gactccctca cgaacgcgag cgcgccggca accgacagcg cgctcgtccg cgatcaacaa
     2521 atcctgctct ttcgtggctt ctattcgggc ggcgccacgt ccaatcgcgg ctatgccttg
     2581 aacgagatcg gcccgcacgg cgtgctcggc ttcctggccc cctcgaacat caattgcacc
     2641 gtgccgaatc cacccgtcca gtgcgagcgt ccgctcggcg gcctcaccct ctgggagctc
     2701 tcgctcgagc tccgcgtcac gttgtcgcaa atcgccgggc tcgtcttctt cgtcgatacg
     2761 agcgacctca cgcgcgagcc cgcgacgttc cgcgccgcgt atccccacct ctcgaccggc
     2821 acgggttttc gcttacgcac gccggtcggc gccgtccgtc tcgatgccgg cgtgcgcgtc
     2881 ccgtacctgc aacacatcgg cgagccgcat ctgcccccga acgaaggcga gccgtccacc
     2941 ttcctcggtc taccgatggc cgtgcatttc ggactcggcg aagcgtttta gtcgctgccg
     3001 acccacgcca cgttcacgcc gctcactgca tcttggtgca ttcgactttg acactcacgc
     3061 ggtttaccgg ctggttcgcg gcgagcaaat agctgttcgt gtggaaaggc gcgagcatga
     3121 tgcgactgtc ttgctcggtg acgtcgttcc agaccatgca gtcgatggga tagctgcagg
     3181 tgttgttcgc catcagccag atgttcttcg tgttgagggt gg
//
LOCUS       DATIML010000396         1747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4410941, whole genome shotgun sequence.
ACCESSION   DATIML010000396 DATIML010000000
VERSION     DATIML010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4410941"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1289)
                     /locus_tag="VLJ38_06890"
     CDS             complement(<1..1289)
                     /locus_tag="VLJ38_06890"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSU39273.1"
                     /translation="MSATRTLSEFLVASRYEDIPANVRHEASRAFLNALGCAIGSARH
                     ETVEAALAAVAPFAGSAQATIFGRNERLDALNAALVNGISTHVLDFDDTHQRAVHPTA
                     PVLPALLAYAEWKKTSGRDLVHAFVLGVEAEVRIGLSVFPEHYDIGWHITGTAGVFGA
                     AAAVGKLLGLDAQRTAWALGIAATQSSGLREMFGSMCKSLHPGHAAQGGMTAALLAAN
                     GFTSSERAIEAPRGFAHVMSTKFDEAVITTGLGASYELSKNMYKPYACGLVVHAAIDG
                     CVQLKREHDLDIDDIERVELLTNPLVPELTGNQAPQDGLQGKFSVYHAAAVALVHGAA
                     GEAQFADVVVRDPRVIAVRDRVSVRASPSVRKLEAHVNIRLRNGTVLEKHVEHALGTV
                     ERPMSDSDLEEKFLGLTDGVLSPDKARRLIGLCWRVA"
     gene            complement(1292..1693)
                     /locus_tag="VLJ38_06895"
     CDS             complement(1292..1693)
                     /locus_tag="VLJ38_06895"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSU39274.1"
                     /translation="MVSRLLWKWTSVRAPGGAGRSSACTATPSRALAVTSAKRNPGTP
                     SIPTIAESYPGFESGTWFALLAPAHTPREIVDRLNAAVAKVVQTPDVREKIVAQGGVP
                     MGGSPQQVGVYIKSEVAKWGKVVRASGAKVE"
BASE COUNT          270 a          595 c          582 g          300 t
ORIGIN      
        1 tcggcgacgc gccagcagag gccgatcagt cgtcgagctt tgtcagggga gagcacgccg
       61 tcggtcaagc ccaggaattt ttcttcgagg tcgctatcgc tcatcggccg ttcaaccgtg
      121 cccagcgcgt gctcgacgtg cttttcgagc accgttccat tgcggagccg gatattaaca
      181 tgcgcctcca gcttacgcac tgaggggctg gccctgaccg acacgcggtc gcgcaccgca
      241 atgacgcgcg gatcgcgcac cacgacgtcg gcgaactgcg cctcgccggc tgcgccgtgc
      301 accagcgcca cagccgctgc atggtagacg ctgaacttgc cttgaagtcc atcctggggt
      361 gcctggttgc cggtgagctc gggcaccagc gggttcgtga ggagctcgac gcgctcgatg
      421 tcgtcgatgt cgaggtcgtg ctcgcgtttg agctggacgc agccgtcgat ggcggcgtgc
      481 acgacgagac cgcacgcgta tggcttgtac atgttcttcg aaagctcgta gctggcgccg
      541 agcccggtgg tgatcaccgc ttcgtcgaat ttcgtcgaca tgacgtgtgc aaagccccgt
      601 ggcgcttcga tcgcgcgctc ggagctcgtg aagccgttcg ccgcgagcag cgccgcggtc
      661 atgccgcctt gcgccgcgtg tccgggatgg aggctcttgc acatgctgcc gaacatctcg
      721 cgcaatccgg acgattgagt cgccgcgatg ccgagtgccc acgccgtgcg ctgcgcgtcg
      781 agcccgagta gcttgcccac cgccgccgcc gcgccgaaca cgcccgcggt gccggtgatg
      841 tgccagccga tgtcgtagtg ctcggggaaa accgagagcc cgatgcggac ctcggcttcg
      901 acgccgagca cgaaagcgtg gacgagatcg cgtccgctcg tcttcttcca ctcggcgtac
      961 gcgagcagcg ccggcagcac cggcgccgtc ggatgtaccg cgcgctggtg cgtgtcgtcg
     1021 aaatcgagca cgtgcgtgct gatgccgttg acgagcgcgg cgttgagcgc gtcgagacgc
     1081 tcgttgcggc cgaagatcgt cgcctgcgcc gatcccgcga aaggcgccac cgcggcaagc
     1141 gccgcttcga cagtctcgtg ccgggcgctg ccgatcgcgc agccgagcgc attgaggaac
     1201 gcacgcgaag cttcgtgacg aacattcgcg ggaatgtctt cgtatcgcga agccacgagg
     1261 aactccgaca gcgtgcgcgt ggcgctcatg ctcactccac tttggcgccc gaagcgcgca
     1321 cgaccttgcc ccacttggcg acctcggact tgatgtagac gcccacctgc tgcggcgatc
     1381 cgcccatcgg cacgccgccc tgagcgacga tcttttcgcg cacgtcgggt gtctggacga
     1441 ctttggcaac agcggcattc agccgatcga cgatctcgcg cggggtgtgt gccggcgcga
     1501 gcagcgcgaa ccacgttccc gattcgaaac cgggatacga ctcggcaatc gtcgggatac
     1561 tcggcgtgcc cggattgcgt ttcgcgctgg tcaccgcgag cgcgcgcgac ggcgtggcgg
     1621 tgcacgcgct cgatctgccc gcgccgcccg gggcgcgcac gctcgtccat ttccacaaca
     1681 accgcgagac catgggcgac gccgccgatc tcgcccgcag cctgcacgcg cgggggctcg
     1741 gcgtgct
//
LOCUS       DATIML010000397         2925 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5567519, whole genome shotgun sequence.
ACCESSION   DATIML010000397 DATIML010000000
VERSION     DATIML010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5567519"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VLJ38_06900"
     CDS             complement(<1..183)
                     /locus_tag="VLJ38_06900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39275.1"
                     /translation="MQDVVTELVWQRPTWMDAELDLETNRPSDEAKMALAIELAERNV
                     AHGGGPFGAVVFEAVTG"
     gene            complement(168..1346)
                     /locus_tag="VLJ38_06905"
     CDS             complement(168..1346)
                     /locus_tag="VLJ38_06905"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HSU39276.1"
                     /translation="MDSMVARSFDLAPAALATPKLTFTPLATTSSEVDFGVDAGKLDL
                     PGLSSEEFTELERAVLTHHVVVVRGQRGLTPREQLELTRRFDPAALAYGHGHRPEIMQ
                     ASVLVQDLVSIPDCPQVKLLGNGRVRDHEGIADVTLTHPSHHAFHRTPLTRAREARGL
                     TRFYRWHLDAALYELHPPRVTTLLALDVPEGPDQTVVYDDGSGDELEVSLGTTAFVSG
                     SKAFDTLSPTQKDFALRTRVRYAPHPYVWMRHARARANGLGLFSEGRELTRDELPAYD
                     DDKLTTLPLVWKNPLTGRPSLQVHAYCVEELFVADEPIGDLDECRRLLYELMRPAIAP
                     ARVYAHRWQPGDLVIFNNRGVWHSVVGALEPDARRVYHQCNLAASEAPRGVEAACRTS
                     "
     gene            1513..2916
                     /locus_tag="VLJ38_06910"
     CDS             1513..2916
                     /locus_tag="VLJ38_06910"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU39277.1"
                     /translation="MSTSLERLAETARRELELLDYPRREWLTPRRTSTGEPILDVLIV
                     GAGQGGLATAFGLSRERVNNLLVVDQNPLDHAGPWRTFARMRTLRTPKHVTGPDLGVP
                     SLSPRAYFEAEHGAGSWETLALLPKETWSEYLAWYRRTLAIPVQPETRVGTLEWNARE
                     RAWKVPCESPRGSELRYARRVVLATGIEGSGAWEVPAFVRAALPERLYAHTRADIDFA
                     ALAGRRVAVLGAGASAFDNAAVALEAGAHEVRLFFRRKSLVRVNAYRWAEFAGFLKHH
                     ADLPDETKWRFIVQILRMGQLPPADTLERARRYPGFHLHPGSSLRALRTDGRLVRFET
                     EQGSFEADFLIVGTGFVTDLALRPELAQVERFIARWADRFTPPEGDRNEELSRHPYLG
                     PHFEFTERELGSAPHLRYLFNYTFGGLLSLGFGGASISGMKYSNQRLVSGITRSLYLE
                     DAAQHLQSLVEFEEAEF"
BASE COUNT          426 a          990 c         1016 g          493 t
ORIGIN      
        1 acccgtcacg gcctcgaaca cgacggcgcc gaacggccct ccgccgtgag cgacattgcg
       61 ctcggcgagc tcgatggcca gcgccatctt ggcttcgtcg ctcggacggt tggtttccaa
      121 atcgagctcg gcgtccatcc acgtcggtcg ttgccacacg agctccgtca cgacgtcctg
      181 catgcggcct ccacgcctcg cggcgcctcg ctcgcggcga ggttgcactg gtgatacacg
      241 cgccgagcgt ccggctcgag cgctccgacg acgctgtgcc agacgccgcg gttgttgaag
      301 atcacgaggt cgcccggctg ccagcgatgc gcgtacacgc gtgcgggcgc gatcgccggt
      361 cgcatgagct cgtagaggag gcgccggcat tcgtcgagat cgccgatggg ctcgtccgcg
      421 acgaagagct cttcgacgca gtaggcgtgg acctggagcg acgggcggcc cgtgagcggg
      481 tttttccaga cgagcggcag cgtcgtcagc ttgtcgtcgt cgtaggcggg gagctcgtcg
      541 cgcgtgagct cacgcccctc cgaaaacaag ccgagtccgt tcgcgcgggc gcgcgcgtgc
      601 cgcatccaga cgtaggggtg cggcgcgtag cggacgcgtg tgcggagcgc gaagtccttt
      661 tgcgtggggg acagcgtgtc gaacgccttg ctgccggaga cgaacgccgt cgttccgagc
      721 gacacttcga gctcgtcgcc cgagccgtca tcgtagacga cggtctggtc ggggccttcc
      781 ggcacgtcga gcgcgagcag cgtcgtgacg cgcggcggat ggagctcgta gagcgcggcg
      841 tcgaggtgcc agcgataaaa gcgcgtgagc ccccgagctt ctcgtgcgcg cgtgagcggc
      901 gtgcggtgaa acgcgtggtg cgagggatgg gtgagggtca cgtccgcgat gccctcgtga
      961 tcgcggacgc ggccgttgcc gagcagcttg acctgcggac aatcgggaat cgaaacgaga
     1021 tcctgcacga gcacgctcgc ctgcatgatc tcgggcctgt gcccgtgccc gtaggccagc
     1081 gccgcgggat cgaagcggcg agtgagctcg agttgttcgc gcggtgtgag gccccgttgc
     1141 ccgcgcacga ccacgacgtg atgcgtcagc accgcgcgct cgagctccgt gaactcctcg
     1201 ctggaaagcc cgggtaaatc cagcttgccc gcgtcgacgc cgaagtcgac ttccgaggac
     1261 gtcgtcgcga gcggcgtgaa cgtgagcttc ggcgtcgcga gcgcggcggg ggcgaggtcg
     1321 aacgagcgcg cgaccatgct gtccattctg gtttgggcgc tcgcatccga ttcgtcaagc
     1381 gcgcgcgggt gttttggtga gacgagccga gctctcggtt tccggcagct tgcgtgaacg
     1441 cgctcgagcg tgctcttggt acgcgcgcga aaccgtcgcg acattcatga cgcctcatcg
     1501 tgctcggcgt cgatgtccac ttcgctcgag cgcttggccg agacggcgcg ccgcgaactc
     1561 gagctactcg actatccgcg gcgcgagtgg ctcacgcctc gccgcacgag tacgggtgag
     1621 cccatcttgg acgtgctgat cgtcggcgcg ggccaggggg gactcgcgac cgccttcggg
     1681 ctctcgcgcg agcgggtgaa caatctcctc gtcgtcgatc agaatccgct cgaccacgcc
     1741 ggaccctggc ggacgtttgc gcgcatgcgc acgctgcgga cgcccaagca cgtcacgggc
     1801 cccgatctcg gcgtgccgag cttgagcccg cgcgcctact tcgaagccga gcacggcgcg
     1861 ggtagctggg aaacgctcgc tctcctgccg aaggagacct ggtccgagta cctcgcttgg
     1921 taccggcgca cgctcgccat tcccgtccag ccggagacgc gcgtcggcac gctcgagtgg
     1981 aacgcgcgtg aacgggcgtg gaaggtaccg tgcgagagcc cgcgcggcag cgagctccgc
     2041 tacgcgcggc gcgtcgtgct cgcgacgggc atcgaagggt cgggcgcttg ggaggtgccg
     2101 gcgttcgtgc gcgcagcctt gcccgagcgg ctctatgcgc acacccgcgc tgacatcgac
     2161 ttcgctgcgc ttgccgggcg acgcgtcgcc gtgctcggtg cgggcgcatc cgcattcgac
     2221 aacgccgccg tcgcgctcga agccggcgcg cacgaagtgc ggctcttctt tcgtcgcaag
     2281 tcgctcgtgc gcgtcaacgc ctaccgctgg gcggagtttg ccggcttcct caagcaccac
     2341 gccgatctgc cggacgaaac caagtggcgc ttcatcgtcc agatcctgcg catgggccag
     2401 ctgccacccg cggacacgct cgagcgtgcg cggcggtatc cgggttttca cctgcacccg
     2461 ggctcaagcc tgcgcgcgct ccggacggac gggcggctcg tgcgcttcga gacggaacag
     2521 ggctctttcg aggcggattt cctgatcgtc ggcaccggct tcgtcaccga tctcgcgctc
     2581 cgccccgagc tcgcgcaggt cgagcggttc atcgcgcgct gggccgaccg cttcacgccg
     2641 cccgagggcg atcgcaacga ggagctctct cgccatccgt acctcggacc gcacttcgag
     2701 ttcacggaac gggagctcgg ctccgcgcct catctccgtt acctcttcaa ctacaccttc
     2761 ggaggcctct tgagcctcgg cttcggcggc gcgagcatct cgggcatgaa gtactcgaac
     2821 cagcgcttgg tctcgggcat cacgcgctcg ctctacctcg aggatgcggc gcagcacctg
     2881 cagagcctcg tcgagttcga ggaggcggaa ttttgaggcg cttcg
//
LOCUS       DATIML010000398         3416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4411148, whole genome shotgun sequence.
ACCESSION   DATIML010000398 DATIML010000000
VERSION     DATIML010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3416
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4411148"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="VLJ38_06915"
     CDS             complement(<1..683)
                     /locus_tag="VLJ38_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39278.1"
                     /translation="MGLTVAMFAGACGSDDKGSGGTGGGGPSSGGGGAGGSAGSGAVG
                     GSAGSARGGTAGSGGNAGKAETAGGAAGEAGVAGEAGAMAAVGAPPLTACATKIQSAR
                     LVPANLLFVIDKSGSMNCNPPQGDAALNARCAEFPVKEDTSKPSKWEIASGALSDAIA
                     TLSGQSNVSAGLTLFPQDDHCGVSADPAVDVAKLDGSQQGDITSALERVSPSGDTPIA
                     GATILGYQHL"
     gene            complement(867..1826)
                     /gene="cysK"
                     /locus_tag="VLJ38_06920"
     CDS             complement(867..1826)
                     /gene="cysK"
                     /locus_tag="VLJ38_06920"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HSU39279.1"
                     /translation="MSKTPKTSGSGASRVTASGLRVADDALALIANTPLVRLGRVAPA
                     GGATVWAKAELLNPAGSVKDRPALSMILEAERAGKLGEGATIVEATSGNTGISLAMIA
                     AVRGYRCVLVMPEDMSLERRYILRAYGADIVLTSATDGMTGAVARARQVLEETPGAFM
                     PSQFANPANPLAHERTTAHEILEQTGGELAAFVSGVGTGGTLTGVGRVLREKLGKNVT
                     IVAVEPAASPVLSGKPAGMHGIQGLGAGFVPEILERNLLDRVVEVSDVAAERMARRLA
                     REEGLLVGPSSGANVHVACELAAELGKGNVVTILCDSGERYLF"
     gene            complement(1916..2830)
                     /locus_tag="VLJ38_06925"
     CDS             complement(1916..2830)
                     /locus_tag="VLJ38_06925"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HSU39280.1"
                     /translation="MSDDRASDAARSGALLVHESAREVLVVTGPDRAAWLNGVVTCDV
                     TKVRPGEAAFGLLLSKLGKLQTDFYALAAEKELLLACAPGTSSISLSELERMLVMEDA
                     ELGRPASELACLALHGPRAAELARAVSDRPGVMHGAVDRTGLGGAVLLVLAPELEAVV
                     ATLTQGGAVLAGDDDWLRLRIERQVGLFGVDYGPQDNPHEAAVERRAISWNKGCYLGQ
                     EVVFMQDARGKVKRRLALVALDGPVPPAGTPVAVAEGDTVGEVTSAAASTLLGRTVAL
                     ARLKTPHFEPGAEVRVGGVSAVVRGEPV"
     gene            complement(2837..>3416)
                     /locus_tag="VLJ38_06930"
     CDS             complement(2837..>3416)
                     /locus_tag="VLJ38_06930"
                     /inference="COORDINATES: protein motif:HMM:NF012803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSU39281.1"
                     /translation="PYAKLVVNGKDLIVTSVQSDTIRPTWPDQDRANYRISPSDELKV
                     ELWDSNPLNNHPICREKVPSFQDFVKTDEPYLEIECDNGGRVRLVVEPAHGRLGLGLS
                     YELRTEQAVVTRVLAESPAARAGLHPGDEILRAQGVEVKSMESGKLQSLINANASLGV
                     KLAVRLGDSAPREVTLRDGAVYPVAGEGIALE"
BASE COUNT          496 a         1239 c         1114 g          567 t
ORIGIN      
        1 aggtgttggt agccgaggat ggtcgcgccc gcgatcggcg tgtcgcccga cggactcacg
       61 cgctcgagcg cgctcgtgat gtcgccctgc tgcgaaccat cgagcttcgc tacgtcgaca
      121 gccgggtccg cgctgacgcc gcagtggtcg tcctggggaa agagcgtgag ccccgcgctc
      181 acgttgctct gcccggagag cgtcgcgatc gcgtccgaca acgccccgct cgcgatttcc
      241 cacttcgacg gcttcgacgt atcctccttg acggggaact ccgcgcaacg tgcgttcagc
      301 gcggcgtcac cctgcggcgg gttacaattc atgctgccgc tcttgtcgat cacgaagagc
      361 aggttcgccg gtacgaggcg cgcggattga atcttggtcg cgcaggccgt gagcggaggc
      421 gcgcccacgg ctgccatggc tcccgcttcg ccggctacac ccgcttcgcc cgccgctccc
      481 cccgccgtct cggccttgcc cgcgttgccg ccggatccgg ccgttccacc ccgggcgctg
      541 cccgcgctcc cgccgactgc gccgctcccg gcgctgccgc ccgctccgcc gccgccgctg
      601 ctcggcccgc cgccgcccgt gccgccactg cctttgtcgt ccgagccgca ggcgccggcg
      661 aacatcgcga ccgttaggcc catgcatccg aatcgtagcc accgcatcgt cagcgattct
      721 cccagctcgc ggagcttagt ccaacggtca cccagaagag tggccgagag ttcgcgctac
      781 ggctcagcac agcccgcaat ccgctgagac tgcaaccatg gccgtgtcga tcttgtgatc
      841 gcgagcgacg aaagtacccg cccagttcag aacaagtagc gctcgcccga gtcgcacaaa
      901 atcgtcacga cgttcccttt gccgagctcg gccgcgagct cgcaggcgac gtgaacgttg
      961 gcacccgacg acggtcccac gagcagtccc tcttcgcgcg cgagccggcg cgccatgcgt
     1021 tccgccgcga cgtcgcttac ttcgaccacg cgatcgagca aattgcgctc gaggatctcc
     1081 gggacgaagc ccgcaccgag cccctgaata ccgtgcatgc ccgccggttt gccggacaag
     1141 acggggctcg ccgctggttc gaccgcgacg atggtcacgt tctttccgag cttttcgcgc
     1201 agcacgcgcc cgacgcccgt gagcgtgccg cccgtgccga cgccgctcac gaacgctgcg
     1261 agctcgccgc ccgtctgctc gaggatttcg tgcgccgtgg tgcgttcgtg cgcgagcggg
     1321 ttggcggggt tggcgaactg actcggcatg aaagcgccgg gcgtttcctc gaggacttgg
     1381 cgcgcgcgcg ccacggcgcc cgtcatcccg tccgtggcgg aggtgagcac gatgtccgcg
     1441 ccgtacgcgc gcaggatgta gcgtcgctcg aggctcatgt cctcgggcat cacgagcacg
     1501 cagcggtaac cacgcaccgc cgcgatcatc gcgaggctga tgccggtgtt gccgctcgtg
     1561 gcctcgacga tggtcgcgcc ttcaccaagt tttcccgcac gttcggcttc gaggatcatt
     1621 gaaagcgcgg ggcgatcttt gacgctgccc gccgggttca aaagctcggc tttggcccat
     1681 accgtcgcgc cgccagccgg cgccacgcgg ccgagccgca cgaggggcgt gttggcaatc
     1741 agagcgagcg cgtcatcggc aactcgcaag ccgctcgcgg tgacgcggct cgcgccggag
     1801 ccgctcgttt tgggcgtctt actcataggg ggctcggaga ttagccgctt ttttccttcg
     1861 cgcgaaagcc cgcgcacgcc gatcgtgatc tgccgccgcc aaagcccggc acgagctaca
     1921 cgggctcgcc gcgaacgacg gcggagaccc cgcccacgcg gacctccgcg cccggttcga
     1981 agtgcggcgt cttcaagcgg gcgagtgcga cggtgcggcc gagcagcgtg ctcgccgcgg
     2041 cgctcgtgac ttcgccgacc gtatcgccct cggcaaccgc gacgggcgtg cctgccggcg
     2101 gcacgggccc gtcgagcgcg acgagcgcca accggcgctt caccttgccg cgcgcgtctt
     2161 gcatgaacac gacttcctgc ccgaggtagc agcccttgtt ccaggaaatg gcgcggcgct
     2221 cgacggcggc ttcgtgggga ttgtcctgcg gaccgtagtc gacaccgaac aggcccactt
     2281 ggcgttcgat gcgcaggcga agccagtcgt cgtcgcctgc gagcacggcg ccgccctgcg
     2341 tcagagtggc aacgacggcc tcgagctccg gcgccaggac gagcagcacc gcgccgccga
     2401 ggcccgtgcg atcgacggct ccgtgcatga cccccgggcg gtcgctcacc gcgcgagcca
     2461 gctcggccgc gcgcggcccg tgcaaagcga ggcacgcaag ctcgctcgca gggcggccga
     2521 gctccgcgtc ctccatcacg agcatgcgct cgagctcgct taaggaaatg gacgaggtgc
     2581 ccggcgcgca cgcgaggagc agctcctttt cagccgcgag cgcgtaaaag tccgtctgca
     2641 atttcccgag cttgctgagg agcagcccga acgcggcctc cccggggcgc accttggtca
     2701 cgtcgcaggt gaccacgccg ttgagccagg ccgcgcggtc cggccccgtc acgacgagca
     2761 cctcccgcgc gctttcgtga acgaggagcg ctccgctgcg cgccgcgtca ctcgctcggt
     2821 cgtcgctcat gcttcctcat tcgagcgcga tcccctcgcc cgccactggg tagacggcgc
     2881 cgtcgcgtaa cgtcacctcg cgcggtgcgc tgtcgccgag ccgcaccgcg agctttacgc
     2941 cgagcgaggc gttggcgttg atgaggctct ggagcttgcc gctctccatg cttttcacct
     3001 cgacgccctg agctcgcaaa atttcgtcgc caggatgcaa acccgcgcgc gccgccggtg
     3061 attcggcgag cacgcgcgtc acgaccgctt gctccgtcct gagctcgtaa gagaggccga
     3121 gccccagcct gccgtgcgcc ggttcgacca cgagccgcac gcggccaccg ttgtcgcact
     3181 cgatttccag gtatggctcg tccgtcttga cgaagtcctg aaagctcgga actttctcgc
     3241 ggcagatcgg atgattattg agcgggttcg agtcccagag ctcgaccttg agctcgtcgc
     3301 tcgggctgat gcggtagttg gcgcgatcct gatccggcca ggtggggcgg atggtatcgc
     3361 tctggacgga cgtgacgatc aggtccttgc cgttcacgac gagcttcgcg taggga
//
LOCUS       DATIML010000399         2457 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4991436, whole genome shotgun sequence.
ACCESSION   DATIML010000399 DATIML010000000
VERSION     DATIML010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4991436"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            513..>2457
                     /locus_tag="VLJ38_06935"
     CDS             513..>2457
                     /locus_tag="VLJ38_06935"
                     /inference="COORDINATES: protein motif:HMM:NF021355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller domain-containing protein"
                     /protein_id="HSU39282.1"
                     /translation="MRHLRIERWVVATFVTAASACAGVAPRAPAPSQDAATPAAPALI
                     SQPTAAPEARREKSSAVAPVGASAGLPPPPSVKLPLAGEAAAATLAEARLVPSDCDAL
                     EGATRRLAEQRVHAMQEAVDEEYRQWAAEQPECWRTFRELGESFGSGGLGLSGIGEGG
                     GGLGLGSSQGYGAGDGRLSGSHKTSSPRRATSASGTNNQVASVDEADIVKNDGRYVYV
                     VMNGALRIIEALDPKVVSVTRLRGSVKELFVEGERAVVYTSEGGNGRRACTYGYDCSF
                     AGDGSATRVLVLDISNRAAPRLVRTLELSGSLLAARRVGRVIHTVVSEGDTDTPEYET
                     WPANLDRCGVKEAYVRKRLAELKRDNAAKIRASRWFPTLREGKNERVLCERALATAID
                     DGDAYTTLVSFDMADDGTPPASVTLRSRPGAIFASQSALYVATTHERAGRRATARHRA
                     WYSFYRSVDEVTDIHEFRLGEHPSDTGYIGSGVVPGHVLNQFAMDEYSGYLRVATTRG
                     RVPNPNVASAVSVLAQSPEGNLVRVGAIENIAPGEDIRAVRFDEERGYVVTFKKTDPL
                     FVLDLYRPDQPKILGALAIPGFSTYLHRIDPNHLLAIGFDANDHGSFAYFDGVILQLF
                     DVKNPTDPRLIHKEKIGSRGSSSE"
BASE COUNT          405 a          849 c          822 g          381 t
ORIGIN      
        1 acagcgacga tcgcatttca gtggttaccc ctgaggctta gtctcactcg gtgattactt
       61 gccgtacatg cgtcacgcgc gctgaaaaag ccggcgaata tcggcgaagc ccgcggtctt
      121 cccgcggctt gcgtgcgagc gcgtgagttg cgcgcagcgt gtaagtgcgg agtcaactcc
      181 cggggttgaa caccgcattt gacgcgactc gtgcgcgccg agcaacggag tcgttcccgc
      241 gcggcaacat cgcctttggc gcgcgccgag taccgtgaaa cgactgcagg caggcagcgc
      301 gagcgtgacg cgtgccgatt tttttggggg gcgacctccg agcgtctggg ggcaacggcc
      361 ctcgttcacg ccgttccacc gcccggcccg ttgcccgcga cgcacagcaa tcgcgcgaac
      421 gcggaggtta cgcgcaccac gcacgtcgtg cgtttgggct cggagcgctc ggaactccgg
      481 tgaggtacgc ggtgtcacga cctccgaggc ccatgagaca cttgcgcatc gagcgttggg
      541 tggttgcgac cttcgtcacg gccgcgagcg cttgcgcggg cgtcgcgccc agagctcccg
      601 ctccctcgca ggacgcggcc actcctgccg ctccagcact catctctcag ccgactgccg
      661 cgcccgaggc ccgccgtgag aagtcgtcgg ccgtcgcgcc ggtgggcgcc tctgcgggac
      721 tcccgccgcc tcccagcgtc aagctgcctt tggcgggcga agcggctgct gcgacgctcg
      781 ccgaagcccg tctcgtgccg tccgattgcg atgctctcga gggagcgacg cgccggctcg
      841 ccgagcagcg cgtccacgcg atgcaggagg ccgtggacga ggaataccgg cagtgggccg
      901 ccgaacagcc cgagtgctgg cgaacctttc gcgagctcgg cgaaagcttc ggctccgggg
      961 gcctcggctt gagcggcatc ggcgaagggg gcggcggcct cgggctcggc tcgagccagg
     1021 ggtacggcgc cggggacggc cggctcagcg gatcacacaa aacgtcgtca ccgcgccgcg
     1081 cgacgagcgc ctccggtacc aacaatcaag tcgcgagcgt cgacgaggcc gacatcgtca
     1141 agaacgacgg ccgctacgtg tacgtggtca tgaacggcgc gctgcgcatc atcgaggcgc
     1201 tcgacccaaa ggtcgtctcc gtcacgcggc tccgcggcag cgtgaaggag ctcttcgtcg
     1261 aaggcgagcg cgccgtcgtc tacacgagcg agggcggcaa cgggcggcgg gcgtgcacct
     1321 acggctatga ctgctcgttt gccggcgacg gcagcgccac gcgcgtcctg gtgctcgata
     1381 tttcgaaccg ggcagcgccg cggctcgtgc gcacgctcga actctcgggc tcactgctcg
     1441 cggcgcgtcg cgtcgggcgc gtcatccaca ccgtggtgag cgagggcgac accgacacgc
     1501 ccgagtacga gacgtggccc gcgaatctcg accgctgcgg cgtaaaggaa gcgtacgtga
     1561 gaaagcggct cgcggagctc aagcgcgaca acgcggcgaa gatccgcgcg agccgctggt
     1621 ttccgacctt gcgtgagggc aagaacgagc gggtgctctg cgagcgcgcg ctcgcgaccg
     1681 cgatcgacga cggcgacgcc tacacgacgc tcgtctcgtt cgacatggcc gatgacggga
     1741 cgccgcccgc gagtgtcacg ctgcgcagcc ggcccggcgc catcttcgcg tcgcagagcg
     1801 cgctttacgt cgcgacgacc cacgagcgcg ccggacgtcg tgcgacggct cgccatcgcg
     1861 cctggtacag cttttatcgc tccgtggacg aggtgaccga catccacgaa ttccgtctcg
     1921 gtgagcaccc gtccgacacg ggttacatcg gtagcggcgt cgtgcctggg cacgtcttga
     1981 accaattcgc gatggacgag tactccgggt acctgcgcgt cgcgaccacg cgcggccgcg
     2041 tgccgaatcc caatgtagcg agcgccgtct ccgtgctcgc ccagagcccc gaagggaacc
     2101 tcgtgcgcgt cggagccatc gaaaacatcg cgccggggga agacattcgc gccgtgcgct
     2161 tcgacgagga gcgcggctac gtcgtcacct tcaaaaagac cgatccgctc ttcgtgctgg
     2221 acctttatcg tccggatcag ccaaagatcc tcggagcgct cgcgatcccc ggcttttcga
     2281 cctacctgca ccgcatcgat ccgaaccacc tgctcgcgat cggcttcgac gcgaacgacc
     2341 acggcagctt cgcctacttc gacggcgtga tcctgcagct cttcgacgtg aagaacccga
     2401 ccgacccgcg tctcatccac aaggagaaga tcggaagccg cggctcgagc tccgagg
//
LOCUS       DATIML010000400         1984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_946819, whole genome shotgun sequence.
ACCESSION   DATIML010000400 DATIML010000000
VERSION     DATIML010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946819"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VLJ38_06940"
     CDS             <1..329
                     /locus_tag="VLJ38_06940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39283.1"
                     /translation="GVSPPGVPIVYNPDPPPVSLSLYLHASCHAQNGTVYSTDGTITF
                     NSLFSGDPNEEDPSQRLTEATFDATFADPRLLYGPTADDPTVKSHVRGFFRFFFQRGQ
                     PAQPFQ"
     gene            337..531
                     /locus_tag="VLJ38_06945"
     CDS             337..531
                     /locus_tag="VLJ38_06945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39284.1"
                     /translation="MKTRVTEVLRDEVARYRLRFTCEHCAHFVAERAACAHEYPVAAH
                     HALDLAVLAELEFCKEFELV"
     gene            550..1485
                     /gene="tilS"
                     /locus_tag="VLJ38_06950"
     CDS             550..1485
                     /gene="tilS"
                     /locus_tag="VLJ38_06950"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HSU39285.1"
                     /translation="MSGSRRSHPPTLLKLAERALREECVVPRGARILCAVSGGPDSMA
                     LLDVLAALAPKLAYELVAHGVDHGLRPEAVAELELAARHAAARGVPFERSRVSIAAGG
                     NLQARARTARYTALDAAAERAGATFIATAHHADDRAETVLLRLLRGSGPRGLAVLPPL
                     AGNRVRPLLRARRSDVLLHLQRHGVPFAEDPSNRDRRHLRVRVREELLPLLSELSPGV
                     VAHLNALSDMLAPLLDRDSAVAGGIAGLGRAQRRQLERAVALSQRKSEIWLAGGAVLA
                     LDATLTPRLLSRAPGQSSRGPTRRRARERPRKNAG"
     gene            1603..>1984
                     /locus_tag="VLJ38_06955"
     CDS             1603..>1984
                     /locus_tag="VLJ38_06955"
                     /inference="COORDINATES: protein motif:HMM:NF018218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HSU39286.1"
                     /translation="MRQPHKTLLLWVVLIVAFLAIWQFLNDQDGPQRSEMPYSEFIAL
                     VKAPRDQRHIEAVEIRDRDYTFTVKNPAGKGAEEHGRTVGPSEDNASDLLSHGVSVKF
                     QKDEGGSFLTPLLTILLPMLFVIVM"
BASE COUNT          307 a          694 c          645 g          338 t
ORIGIN      
        1 ctggagtttc gcccccggga gtacccatcg tttataatcc cgatccgccg ccggtcagcc
       61 tgagcctgta cctgcacgcg agctgccacg cccaaaacgg caccgtctac tcgacggacg
      121 gcaccatcac cttcaattcg ctcttcagcg gcgatccgaa cgaagaggac ccgagccagc
      181 gcctcacgga agccacgttc gacgcgacgt tcgccgaccc gcgtttgctc tacggcccca
      241 cggcggacga tccgaccgtg aagagccacg tgcgcggttt cttccgcttc ttcttccagc
      301 gcggccagcc ggcgcagccg ttccaatgag cgagccgtga agacgagggt cacggaagtc
      361 ctgcgcgacg aggtcgcgcg ctatcgactc cggttcacct gcgagcactg cgcgcatttc
      421 gttgcggagc gggctgcctg cgcccacgaa tatccggtcg ctgcccacca cgcgctcgac
      481 ctcgccgtgc tcgccgagct cgagttctgc aaagagttcg agctcgtctg acgcctggcg
      541 cgccgagtca tgtcggggtc ccgccgctca catccgccta cactgctcaa gctcgcggag
      601 cgggcattgc gcgaggaatg cgtcgttcca cgcggcgcgc gaattttgtg tgccgtttcg
      661 ggcggtcccg actcgatggc cctgctcgat gtgctcgcgg cgctcgcgcc gaagctcgcc
      721 tacgagctcg tggcgcacgg cgtcgatcac ggcttgcggc cggaagcggt cgccgagctc
      781 gaacttgccg cacgccatgc tgcggcgcgc ggcgtcccgt tcgagcgcag tcgcgtctcc
      841 atcgccgcgg gcggcaactt gcaggcgcgg gcgcgtacgg cgcgttacac cgcgcttgat
      901 gcggcggccg agcgcgcggg ggcgaccttc atcgcgacgg cgcaccacgc cgacgatcgc
      961 gccgaaacgg tgctcctgcg cctgctccgt ggctccggac cgcgcgggct cgccgtattg
     1021 ccgccgctcg cgggcaaccg ggtccggccc ttgctgcggg cgcgacgcag cgacgtgctc
     1081 ctgcacctac agcgtcatgg ggtgcccttt gccgaagacc cgtcgaaccg cgatcgccgc
     1141 cacctgcgcg tccgcgtgcg cgaagagctc ttgccgttgc tcagcgagct ttcgcccgga
     1201 gtcgttgccc acctgaacgc actttccgac atgctcgccc cgctgctcga ccgcgactcc
     1261 gctgtcgcgg gcggcatcgc cggactcggt cgagctcagc gtcgccagct cgagcgagcc
     1321 gtcgccctgt cgcagcgaaa gagcgagatt tggctcgctg gtggcgcggt gctcgcgctc
     1381 gacgcgacgc tcacgccgcg cctgctgtcg cgcgcgccgg ggcaatccag cagaggcccg
     1441 acgaggcgga gggctcgcga acggccacgt aaaaacgcgg gttaagcccc tgtcacgcaa
     1501 agttcgtacg cgtgaaaggc gtgtggagtt tcagcggatt tcagcgattt cgggggtcga
     1561 cggagcgagt gagcggtgcc atgctgttcg ctcgaggccc gcgtgagaca accgcacaag
     1621 acactcttgc tctgggtggt cctgatcgtc gctttcctgg cgatctggca atttctgaac
     1681 gaccaagacg gcccgcagcg ctcggagatg ccgtacagcg agttcatcgc gctcgtgaag
     1741 gcgccgcgcg atcaacggca catcgaagcc gtcgagattc gcgatcgcga ctacacgttc
     1801 accgtgaaga accccgcggg caagggcgcg gaggaacacg gtcgcaccgt cggcccgagc
     1861 gaggacaacg cgtccgacct cctgtcgcat ggcgtgagcg tgaagttcca aaaggacgag
     1921 ggcggatcgt ttctgacgcc gctcctcacg atccttttgc cgatgctgtt cgtgatcgtc
     1981 atgt
//
LOCUS       DATIML010000401         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_661027, whole genome shotgun sequence.
ACCESSION   DATIML010000401 DATIML010000000
VERSION     DATIML010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_661027"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1500)
                     /locus_tag="VLJ38_06960"
     CDS             complement(<1..1500)
                     /locus_tag="VLJ38_06960"
                     /inference="COORDINATES: protein motif:HMM:NF019130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046559 - alpha-glucuronidase activity
                     [Evidence IEA];
                     GO_process: GO:0045493 - xylan catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucuronidase family glycosyl hydrolase"
                     /protein_id="HSU39287.1"
                     /translation="MSSHPGAGTNGGAGTPAAGGQAAGGAAGAVAGGAPSAGMAGAAT
                     ETYPVPTAPPPDEDGSSLWLRYPAVSLPSRLAEYRSAIRYVVKAESSPTLKAAESELV
                     KGIGGLTASTVPLADEPADEGAVVFGTPDSSPSVKSLALDLSAVGSEGYVVQVATVSG
                     HAAVVVAANTDLGVLYGSFALLRHLECHRTLQALALTSAPKIQRRILEHWDNLDGSIE
                     RGYAGKSLWNWSALPGTLSPRYTDYARANASIGVNGVVLNNVNADEKILSSSNLQKVA
                     ALANVFRPYGIRVYLSAQFGAPALNGGLSTNDPLDSGVKKWWADLANTIYQQIPDFGG
                     FLVKANSEGQPGPADYGRTHADGANTLAAALAPHDGIVLWRAFVYKDDGSDRIGQAYA
                     EFKPLDGKFASNAIVQVKNGPLDFQPREPFSPLFGAMPSTPLALELQITKEYLGEDTH
                     LAYLGPLYEEVLKSDTYAKGAGSTVARVIDGTVHGYTNTAISGVANIGTD"
BASE COUNT          305 a          643 c          655 g          334 t
ORIGIN      
        1 atcggtgccg atgttcgcca cgcccgagat cgcggtgttg gtgtagccgt gaacggtgcc
       61 gtcaatgacc cgcgcgaccg tcgagcctgc ccccttcgca taggtgtcgg acttgagcac
      121 ctcttcatag agcggcccga ggtaagcgag gtgcgtgtcc tcgccgagat actccttggt
      181 gatctgaagc tcgagggcca gcggcgtgct cggcatcgcg ccgaacaacg ggctgaacgg
      241 ctcgcgcggc tggaagtcga gcggtccgtt cttcacctgc acgatggcgt tgctcgcgaa
      301 ctttccgtcg agcggcttga actctgcgta cgcttggccg atgcgatcgc tgccgtcgtc
      361 tttgtagacg aaggcgcgcc agagcacgat gccgtcgtgg ggcgcgagcg ccgcggcgag
      421 cgtgttggcg ccgtcggcgt gcgtgcgacc gtaatcggcc ggtcccggtt gtccctcgga
      481 gttcgccttg acgaggaagc cgccaaaatc ggggatttgc tgataaatgg tgttcgcgag
      541 gtcggcccac cacttcttca cgccgctgtc gagcgggtcg ttcgtgctga ggccgccgtt
      601 cagcgcggga gcgccgaact gagcggagag gtagaccctg atgccgtacg gccgaaacac
      661 gttcgcgagg gcggcgacct tctggagatt ggagctcgag aggatcttct cgtcggcgtt
      721 cacgttgttg agcacgacac cgttgacccc gatcgacgcg ttggcgcgcg cgtagtcggt
      781 gtaacgcggc gagagcgtgc ccggcagcgc gctccaattc cacagcgatt tacccgcata
      841 gccgcgctcg atcgagccgt cgagattgtc ccagtgttcg agaatgcgac gttggatttt
      901 gggcgcggag gtcaacgcca aggcctgcaa cgtgcgatga cattcaaggt gtcggaggag
      961 cgcaaagctg ccgtagagaa cgccgaggtc ggtgttggcc gccacgacga cggcggcgtg
     1021 accactcacc gtcgcgactt gcacgacgta accttcgctg cccacggcgc tgagatcgag
     1081 cgccagcgac ttcacgctcg gtgacgagtc gggcgtcccg aacacgacgg ctccctcgtc
     1141 cgcgggttcg tcggcgagcg gcaccgtgct cgccgtgagc ccaccaatgc ccttcacgag
     1201 ctcggattcg gccgccttca gcgtcggcga gctctccgct ttcaccacgt aacgaatcgc
     1261 actccgatat tctgcgagcc ggctcggcaa cgagactgcc ggatagcgga gccataaaga
     1321 cgaaccgtct tcgtcgggcg gtggcgccgt cgggaccgga tacgtctcgg tcgcggcccc
     1381 ggccatgccg gcgctcggcg cgccaccagc gacggcacca gcggcgccgc ccgcagcttg
     1441 cccgcctgcg gctggggtac ctgccccgcc gttcgtccct gcgccagggt gcgacgacat
     1501 cgccccagcc gcgccgcttg cgccgaggcc agcgctgcca ccggtcgttg caggtgcgcc
     1561 gccgccagga ttgccagcgc ccggattacc gccgctcgtg ctcccgccct cagcgctcga
     1621 acctgcccct gcatgcgtcg cgccgccagg cggtggctcc tgggagctac agccgaggcc
     1681 gattagaacc gcgagagcaa actgggcagc gcgggccggt gaagttcgaa gcatctcgtt
     1741 acgctgcaaa gtagcgcggc gcttgcgcgg cggccagctt cgccagctga gcgaaacaac
     1801 gaacgtacgc ttcggtgccc gtcgtcacgg gcaccggtca tcgcgcgtca gttcacgctg
     1861 gggtcgctgg caaaagcagg ctcttcggcg tgaacgaggg cgggttgctc gaccgtgacg
     1921 ctccggctct cgaacgc
//
LOCUS       DATIML010000402         3229 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_661033, whole genome shotgun sequence.
ACCESSION   DATIML010000402 DATIML010000000
VERSION     DATIML010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3229
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_661033"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..936)
                     /locus_tag="VLJ38_06965"
     CDS             complement(<1..936)
                     /locus_tag="VLJ38_06965"
                     /inference="COORDINATES: protein motif:HMM:NF014900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase family protein"
                     /protein_id="HSU39288.1"
                     /translation="MANPWADFSEGSWRDEIDVHAFILDNAQAYLGDATFLEPPTRRT
                     SRLWQRVNVLLEKERSQGVLDVSQIPSSITAHRPGYIDRACELIVGLQTDAPLKRAIF
                     PNGGMHMVEASLQAYGFAVDPALRRIFTRYRKTHNQGVLDTYSEDALRARSSHLVTGL
                     PDAYGRGRIIGDYRRVTLYGVDRLLAEKRTERDALDDVAASDEVIRDREELMEQVRAL
                     VELAEMAESYGVDISAPAASAREAIQWLYFAYLGAIKEQNGAAMSLGRTSTFLDIYLE
                     RDLRLGRLTEAEAQELVDDLVIKLRLVRFLRTHEYD"
     gene            complement(960..2480)
                     /locus_tag="VLJ38_06970"
     CDS             complement(960..2480)
                     /locus_tag="VLJ38_06970"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HSU39289.1"
                     /translation="MLLSSTAEAMYWTGRYFERAQALARVLLGCERLALDSPDGEEGA
                     LSALLGLVGCDPEGARDARPGVSELRRTLVLDAQNPSSVRGALGAARENLRSGRTLMP
                     AAVWAPVNRLYARLGDIDPADGASVLAALDDVEATGSLVEGQLSASMTRDAAYAFWRI
                     GCYVERADMLLRTLSVLVPRLTTDAEQRFADVRWIGVLESIGAYAMYRRRHHTHIDVP
                     TLLKFVLDEPSFPRSVQYLVHAIEQELDGLPRPGPARDALAACALPAALEPNVARFAT
                     LAATLMAALEQFGDVFGENYFPVEHATRAATSPASIPELPVARDPFEHLGREHAAIEA
                     VLRLLDEMRARAACGQEVDRSAVRAIVDFFTDFGVLGHHEKEEQILIPALVREGFAWH
                     DGPLASMRNDHRQEHYFLRVLTHLCGQEAAWSPEDHRRFLSVTQEFVPFLRAHMRLEQ
                     REVFEPGARLLGSEVKAALARDLCRFDAQTAGGVRAAALRLDSLLVKYGVACRASA"
     gene            complement(2506..>3229)
                     /locus_tag="VLJ38_06975"
     CDS             complement(2506..>3229)
                     /locus_tag="VLJ38_06975"
                     /inference="COORDINATES: protein motif:HMM:NF025761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HSU39290.1"
                     /translation="YLAQQMGIDLVLGSDLVVLDDDCVYAKTVAGLARIHVVYRRVDD
                     AFLDPEVFNPDSVLGCRGLVRSWRAGRVALVNAPGAGVADDKLVYSYVPDFIRYYLGE
                     EPILPNVETFRLLEESQRRHVLGRLQDFVVKPVNESGGYGVVVGNVASAAELEQCREA
                     ITANPRNFVAQPIVALSTAPTLCPEGVEPRHLDLRPFILTGEDQYVTRGGLTRVALRK
                     GSLIVNSSQGGGSKDTWIVNDI"
BASE COUNT          555 a         1069 c         1094 g          511 t
ORIGIN      
        1 atcgtactcg tgcgtgcgca ggaagcgcac gagccgcagc ttgatcacca agtcgtcgac
       61 cagttcctgg gcctctgcct cggtcagccg cccgagccgg agatcgcgct ccaaatagat
      121 atcgaggaac gtcgacgtcc ggccgagcga cattgccgca ccgttttgct ccttgatggc
      181 gccgaggtaa gcgaagtaga gccattgaat cgcctcgcgc gcgctcgcgg ccggtgcgga
      241 aatgtcgacg ccgtagctct cggccatctc cgcgagctcg accagcgcgc gcacctgctc
      301 catcaactcc tcgcggtcac ggatcacttc gtcggatgcg gcaacgtcgt cgagcgcgtc
      361 gcgctcggtc cgcttttcgg cgagcaagcg gtcgacgccg tagagtgtca cacgccggta
      421 atccccgatg atccgcccgc gaccgtaggc gtcgggtagc cccgtgacga ggtgactcga
      481 acgggcgcgg agcgcatcct cggagtaggt gtcgagcaca ccctggttgt gagtcttgcg
      541 gtaacgcgtg aaaatgcggc gtagcgccgg gtccaccgcg aagccgtagg cctgaagcga
      601 ggcctcgacc atgtgcatgc cgccgttcgg aaagatcgcg cgcttgagcg gcgcgtccgt
      661 ttgcaagccc acgatgagct cacacgcccg atcgatgtag ccgggccggt gcgccgtgat
      721 tgacgagggg atctgggaaa cgtcgagcac gccctggctg cgctcctttt cgagcaggac
      781 gttgacgcgt tgccagagcc ggctggtgcg tcgggtcggc ggctcgagaa acgtagcgtc
      841 gccgaggtac gcctgagcgt tgtccagaat gaaggcgtgc acgtcgatct cgtcccgcca
      901 ggaaccttcg ctgaagtccg cccaagggtt tgccatacgc gtttgcttgg cggcgcaggt
      961 cacgcgctgg cgcggcacgc gacgccgtac ttgacgagga ggctgtcgag acgcagcgcg
     1021 gcggcgcgca cgccgcccgc agtctgtgcg tcgaagcgac agaggtcgcg cgcgagggcc
     1081 gccttcacct cgctgccgag caggcgcgcg ccgggctcga acacctcgcg ttgctcgagg
     1141 cgcatgtgcg cgcgcaagaa cggcacaaat tcctgggtga cgctcaggaa gcgccgatgg
     1201 tcctccggcg accacgccgc ttcttgcccg cagagatgcg tgaggacgcg taggaagtaa
     1261 tgctcctggc ggtgatcgtt ccgcatcgat gcgagcggac catcgtgcca agcgaatccc
     1321 tcgcgcacga gggcgggtat caagatctgc tcttcctttt cgtggtgccc gagcacgccg
     1381 aagtcggtga aaaaatcgac gatggctcgc accgcgctgc gatcgacctc ttgcccgcag
     1441 gcggctcgcg ctcgcatctc gtcgagcaaa cgcaggacgg cttcgatcgc ggcatgctcg
     1501 cgaccgaggt gctcgaaagg gtcgcgcgcg acgggcaact ccgggatcga ggccggagac
     1561 gtcgcggctc gcgtcgcatg ctcgaccgga aagtaatttt cgccgaacac gtcgccgaac
     1621 tgttcgagcg cggccatcag cgtcgcggcc aacgtggcga agcgcgccac gttcggctcg
     1681 agcgctgccg gtagggcaca agcggcgagt gcgtcgcgcg cgggtcccgg acgcggtagc
     1741 ccgtcgagct cctgctcgat ggcgtggacg aggtactgca cgctgcgcgg aaagctcggc
     1801 tcgtcgagca cgaatttcaa gagcgtcggc acgtcgatgt gcgtgtggtg tcgccgccga
     1861 tacatcgcat aggcgccgat cgattcgagc acgccgatcc agcgcacgtc ggcgaagcgc
     1921 tgctcggcgt cagtcgtgag ccggggcacg agcacgctca aggtccgcag caacatgtct
     1981 gcgcgctcga cgtagcagcc gatgcgccag aacgcgtagg cggcgtcgcg cgtcatgctg
     2041 gccgagagct gcccttccac taggctgccc gtcgcctcga catcgtccaa ggccgcgagc
     2101 acgctggcgc cgtctgcggg gtcgatgtcg ccgagccgag cgtagagccg attcaccggc
     2161 gcccaaacgg cggccggcat cagggtgcgg cccgaacgca agttctcgcg agccgcgccg
     2221 agcgctccgc gcacgctcga gggattctgc gcgtcgagca ccagcgttcg tcggagctcg
     2281 ctcacgcccg ggcgtgcgtc gcgcgcccct tccggatcgc agccgacgag ccccagcaga
     2341 gcagacagcg ctccctcttc gccgtcgggc gaatcgagcg cgagccgctc gcagccgagg
     2401 agcacgcgag cgagcgcctg agctcgctcg aaatagcgcc ccgtccaata catggcttct
     2461 gcggtactcg agagcaacac gatgacctcc gatctgagcc gaagctcaga tgtcgttgac
     2521 gatccaggtg tctttgctgc cgccaccctg cgaggaattg acgatcagcg agcctttacg
     2581 cagcgcgacg cgcgtgagcc cgccccgcgt cacgtactgg tcctcgcccg tgaggatgaa
     2641 gggcctgaga tccaaatgac gcggttcgac gccctcgggg cagagcgtcg gtgcggtcga
     2701 tagcgccacg atgggctggg cgacgaaatt gcgcgggttc gcggtgatcg cctcgcggca
     2761 ctgctcgagc tccgccgccg aagcgacgtt tcccaccacg acgccgtagc cgcccgattc
     2821 gttgaccggt ttgaccacga aatcctgcag ccgcccgagg acgtggcggc gctgtgactc
     2881 ctcgagcagg cgaaaggtct cgacgttcgg caggatcggc tcctcgccca ggtaataacg
     2941 gatgaagtcg gggacgtagg aatagacgag cttgtcgtcc gcgacgccgg caccgggcgc
     3001 gttgaccaac gcgacgcggc cggcgcgcca cgagcgcacg agacctcggc aaccgagcac
     3061 cgagtccggg ttgaacacct ccggatcgag aaatgcgtca tcgacgcggc ggtagacgac
     3121 gtggatccgc gccagcccgg cgaccgtctt ggcgtacacg caatcgtcgt cgagcacgac
     3181 caggtcgctg cccagcacga ggtcgatgcc catttgctgg gcgaggtag
//
LOCUS       DATIML010000403         4221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4122690, whole genome shotgun sequence.
ACCESSION   DATIML010000403 DATIML010000000
VERSION     DATIML010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4221
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4122690"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VLJ38_06980"
     CDS             complement(<1..348)
                     /locus_tag="VLJ38_06980"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39291.1"
                     /translation="MDSDAEVARARLGRTVGGRWLLERVLGTGGMGAVYAARSPDGAV
                     AAIKILHPEMGARRDVRKRFLREGSAASKIGHAGVVQMLGQGDGEEAFLAMELLEGET
                     LRDRVRRHGRLPLD"
     gene            complement(426..1295)
                     /gene="murI"
                     /locus_tag="VLJ38_06985"
     CDS             complement(426..1295)
                     /gene="murI"
                     /locus_tag="VLJ38_06985"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HSU39292.1"
                     /translation="MTGAPHAPRGDAPLGVFDSGLGGLTVVRALRQALPRERIVYLGD
                     TARVPYGTRSAETVLRYARGCARVLIDRGVKGLVVACNTVSAVALDMLRAELDLPVLG
                     VVEPGARAAVGALGRLAEAGGARIGVLGTPGTIASGAYPRAIGRLTTRVEVVGAAAPL
                     LVPLVEEGWLEGDVPRLAIERYLAPLVAARARVIVLGCTHYPLLAPLISEVAARLAGA
                     EVAVVDSAVATADDVVAWIAEERIPGAPVASAPATLEVLVTDRPGSFQAMAGRFLGGD
                     APAVTQIDLAAQA"
     gene            complement(1292..2605)
                     /locus_tag="VLJ38_06990"
     CDS             complement(1292..2605)
                     /locus_tag="VLJ38_06990"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HSU39293.1"
                     /translation="MKSELGSSVRVALLGCGTVGGGVLRLLRDNGSVLFPRIGAPIEV
                     THVLVRNLDKPRVPECKREWLTTDPEVIFNDAKVDVVLEVMGGEQPAWSYIERALEAG
                     KAAVTANKLLIAKHGPALVARAIAKGTDLAFEASVGGGIPIIRTLREALSSDSVSSVH
                     AILNGTSNYILTRMRDAGLSFAAALKEAQDLGYAEADPTLDVDGHDAAQKLIVMAMLA
                     FAAQVDTTKMVVEGIRSLDEADFAFAERFGFTLKHLGIGYDRGEKVELRVHPALVRKN
                     SVLANVDGVLNGMFVMGRALGPCLLVGRGAGDMPTAVSVVADLVDVARARIEGQPGLM
                     TRGIQLKERGLLPQDDVVTRYYLRFDVGDHPGVIGTIASALGAEGVSIEQMVQEGRAD
                     GEGGAVPVCIITHVSKEGAVRRAITAIEKQPFLRGRPRLLRIEEV"
     gene            complement(2602..>4221)
                     /locus_tag="VLJ38_06995"
     CDS             complement(2602..>4221)
                     /locus_tag="VLJ38_06995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39294.1"
                     /translation="RDALAAHGVAAAAQAQTNGAAQGPPAPASDSRAAARDEVDCRAR
                     LERAQGLTGSVLADLPASARATLLAQVKATPVVFFERPVATSADPVVRQWRSELTTSE
                     LPGRVLARLLHRFRQYPAFLREVILTDGYVYATEPALAVTLAEGVTPGALFRDRHIVI
                     ERGRARVSAESDGQGGYRYVDGPERGKAARLVLFDRVFVEGATVGPPRHVDLEPLRDE
                     LGFDQLELERATADGVVARARYGELGVPTLLTRRGTTLERACEAPGAFAPQLAAFRAE
                     RARRQRGVSHVRAAILEGVDESLPFDEPRTEFGQQDGKLRQEWRQAYFQRASHYDFNG
                     DTYRVFDAAGRPLVPEVCIDFVVDSLERAGGAWYARAGQAPAHAGGSIEFDGTGMLNR
                     RNVEEFLALARRRSDWFDLRPAPPEEQVPLKWRDRFFSTLYAHRAEYQPGDIVVILGE
                     RDDAKLHYHSFFVFDADPVTAMPTLVAGNSGRPRVRAWAAEMASAPKRSVFARVRLRS
                     LFLEQTGATRPGAAPRPLTAKAEPLRSPASP"
BASE COUNT          636 a         1537 c         1439 g          609 t
ORIGIN      
        1 gtcgagcggc agccgcccgt ggcggcgcac gcggtcgcgc agcgtctccc cttcgagcag
       61 ctccatggcg aggaacgctt cctcgccgtc accctgcccg agcatctgca cgacacccgc
      121 gtgcccgatc ttgctcgccg ccgagccctc ccgcagaaag cgcttgcgga cgtcgcgccg
      181 cgcccccatc tcgggatgta ggatcttgat ggcggcgacc gccccgtcgg gactgcgcgc
      241 ggcgtagacc gcgcccatgc cgcccgtacc gagcacgcgc tcgagcaacc agcgcccgcc
      301 caccgtgcgg ccgagtctcg cccgagcgac ctccgcgtcc gaatccacgc tgcctagata
      361 ctccagacgc tccacggccc aaagccaccc gcgcttccct cgcctcgccc gctcctccga
      421 ggaatctaag cctgcgcggc gagatcgatt tgggtcacgg cgggtgcgtc gccccccaaa
      481 aaacggccgg ccatcgcctg aaagctgccg ggccgatccg tcaccagcac ttcgagcgtg
      541 gccggagcgg acgccacggg agcgcccgga atgcgttcct cggcaatcca agccacgacg
      601 tcgtccgcgg tcgcgacggc gctgtcgacc acggcgacct ccgcgccggc gagtcgagcg
      661 gcgacctccg aaatcagcgg cgcgagcagc gggtaatgcg tgcagccgag cacgatcacg
      721 cgcgcgcgcg cggcgacgag cggcgcgaga taccgctcga tggcgagccg cggcacgtcg
      781 ccttcgagcc atccctcttc gacgagcggt acgagcagcg gcgcagccgc gccgacgact
      841 tcgacgcgtg tcgtgagccg gccaatcgca cgcgggtacg cgcccgacgc gatggtcccc
      901 ggcgtgccga ggacgccgat gcgggcgccg cccgcttctg ccaagcgccc gagcgcaccg
      961 acggctgcgc gcgcgccggg ttcgaccacg ccgagcacgg gcaaatcgag ctcggcgcgc
     1021 aacatgtcga gcgcgacggc gctcacggta ttgcacgcga ccacgaggcc cttcacgccg
     1081 cggtcgatga gcacgcgagc gcacccgcgc gcgtagcgca gcaccgtttc agccgagcgc
     1141 gtgccgtacg ggacgcgcgc agtgtcgccg aggtagacga tccgctcccg cggcagcgcc
     1201 tgccgcagcg cgcgcaccac cgtgagcccg ccgagcccgg agtcgaacac gccgagcggc
     1261 gcgtctcccc gcggcgcgtg aggcgccccc gtcaaacctc ctcgatacgc aagagcctcg
     1321 gccgtccccg caggaacggc tgcttttcga tggccgtgat cgctcgccgc acggctcctt
     1381 ctttcgacac gtgcgtgatg atgcacaccg gcacggctcc gccttcgccg tcggcgcggc
     1441 cttcctgcac catctgttcg atgctcacgc cttcggcgcc gagcgcggag gcgatggtgc
     1501 cgatgacgcc cggatgatcg cccacgtcga agcgcaggta gtagcgcgtg acgacgtcgt
     1561 cctgcggcaa cagcccgcgc tccttgagct ggatcccgcg cgtcatcaag cccggttggc
     1621 cctcgatgcg cgcacgcgcg acgtccacga gatcggcgac gacgctcacc gccgtcggca
     1681 tgtcgcctgc gccgcgtccg acgagcaagc acggaccgag cgcgcgtccc atcacgaaca
     1741 tgccgttcaa gacgccgtcg acgttggcga gcacgctgtt tttgcgcacg agcgccgggt
     1801 gcacgcggag ctccaccttt tcgccccgat cgtagccgat gccgaggtgc ttcagcgtga
     1861 agccaaagcg ttcggcgaag gcgaaatccg cctcgtcgag cgagcggatg ccttcgacca
     1921 ccatcttcgt ggtgtcgacc tgcgccgcga acgcgagcat ggccatgacg atgagcttct
     1981 gcgcggcgtc gtgaccgtcg acgtcgaggg tcggatcggc ttcggcgtag ccgaggtcct
     2041 gcgcttcctt gagcgccgcc gcgaacgaga gtccggcgtc gcgcatgcgc gtgaggatgt
     2101 agttcgaggt gccgttcagg atggcgtgca cgctcgagac cgagtcgctc gagagcgctt
     2161 cgcgcaaggt gcggatgatg gggatgccgc cgccgacgga ggcctcgaac gcgagatcgg
     2221 tgcccttggc gatcgcgcgc gcgacgagcg ccggaccgtg cttggcgatg aggagcttgt
     2281 tggccgtgac cgcggccttc cccgcctcga gcgcgcgctc gatgtagctc caggcgggct
     2341 gttcaccgcc catgacctcg agcacgacgt ccaccttcgc gtcgttgaag atcacttcgg
     2401 gatcggtcgt gagccattcg cgcttgcact cggggacgcg cggcttgtct agattgcgca
     2461 cgagcacgtg cgtgacctcg atcggcgcgc cgatgcgcgg gaacagcacc gagccgttat
     2521 cgcgaagcag gcgcagtacg ccgccgccga cggtgccgca gccgagaagg gccacgcgca
     2581 cgctggatcc gagctcgctc ttcatgggga ggccggtgac cttagtggct cggctttggc
     2641 ggtcaagggc ctcggcgcgg cgcccggccg cgtcgcgccc gtttgctcga ggaacaacga
     2701 gcggagccgt acccgcgcga agacgctgcg tttcggtgcc gacgccattt ccgccgccca
     2761 ggccctgacg cgagggcgac ctgaattgcc cgcgaccagg gtcggcatcg ccgtcaccgg
     2821 atcggcgtcg aacacgaaga aggagtggta gtggagcttc gcgtcgtcgc gctcccccaa
     2881 aatcaccacg atgtcacccg gctggtactc ggcgcggtgg gcgtaaaggg tcgagaaaaa
     2941 gcggtcgcgc cacttgagcg gcacctgctc ttcgggcggc gccggacgga ggtcgaacca
     3001 gtcgctgcgg cgccgcgcga gcgcgaggaa ctcctcgacg ttgcggcggt tgagcatgcc
     3061 cgtcccgtcg aactcgatgc tgccccccgc gtgggccggc gcttgtccgg cgcgagcgta
     3121 ccaagcgccg cctgcgcgct cgaggctgtc gacgacgaag tcgatgcaca cctccggcac
     3181 gagcggccgc cccgcagcgt cgaagactcg gtaggtgtcg ccgttgaagt cgtagtggct
     3241 cgcgcgctgg aaatacgcct gccgccactc ttgccgcagc ttgccgtcct gctgcccgaa
     3301 ctcggtgcgc ggctcgtcga acggcagact ctcgtcgacg ccttcgagga tggccgctcg
     3361 gacgtggctg actccccgct gccgcctcgc gcgttcggcg cgaaacgcgg caagctgcgg
     3421 agcgaacgcg ccgggcgctt cgcacgcgcg ctcgagcgtg gtgccccgtc gcgtgaggag
     3481 cgtcgggaca ccgagctcgc catagcgcgc gcgcgcgacg acgccgtccg ccgtcgcgcg
     3541 ttcgagttcc agctggtcga agccgagctc gtcgcggagc ggctcgagat cgacgtgacg
     3601 cggaggtccg accgttgcgc cttcgacgaa cacgcgatcg aagagcacga gtcgcgccgc
     3661 cttgcctcgc tcgggaccgt cgacgtagcg atagccgccc tgtccgtcgc tttcggcgga
     3721 aacgcgcgcc cttccgcgct cgatcacgat gtgccggtcg cgaaagagcg ccccaggggt
     3781 gacgccttcg gccagcgtca ccgcgagcgc cggctcggta gcatacacgt agccgtcggt
     3841 gaggatcacc tcgcgcagaa atgccgggta ttgccggaag cgatggagta agcgcgccag
     3901 cacgcggccg ggcaattcgc tcgtcgtgag ctcgctccgc cattggcgta cgacgggatc
     3961 ggcactcgtc gccacgggcc gctcgaagaa cacgacgggc gttgctttga cctgagccag
     4021 caacgtcgcc cgcgcggacg ctggcaaatc ggcgagcacg ctgccggtca ggccctgtgc
     4081 ccgctcgagc cgcgcacggc agtccacttc gtcacgcgcc gccgcgcgtg agtcgctcgc
     4141 cggagccggc ggcccctgcg cagccccgtt ggtctgcgcc tgcgcggccg ctgccacacc
     4201 gtgcgcagca agggcgtcac g
//
LOCUS       DATIML010000404         3569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3546889, whole genome shotgun sequence.
ACCESSION   DATIML010000404 DATIML010000000
VERSION     DATIML010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3569
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3546889"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2013)
                     /locus_tag="VLJ38_07000"
     CDS             complement(<1..2013)
                     /locus_tag="VLJ38_07000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39295.1"
                     /translation="MNERRRGSRLALRSVSVFALAGAMTFAARAGAQGPKPAPATPGP
                     SAATTPGAFAPNAASAAPSANAPSAASVTNGPPGSSTPPGSSIPPDAAAATGAAPPGL
                     DTRGSAFMAYQKALEQRRLAATESLSIQRLRDELARIEDEIAAGRRDEAIGDLVYIVE
                     SPRFAPFAQSTEGKTARFLLGDALGRGGAHDVARAYLVGLLQGDPSESAYRRAVHSLV
                     DFGLDSERPRVFLTDLDAVPPSASDEIRGDISYLAGRTAESEGKPNDALTEYAKVSDR
                     SRFWAQATYLTGVIEVEQKRYKEGENAFCKVAEPKLTPKHAAFFGGSDFFRVRDLARL
                     GLGRVAHEQYRFDDARYYYYLVPHDSERLPEALYETATTRYEAKDYRGARDAMDELHR
                     VSTNHPYEDEAWILDSYIDLALCRFPQADHKLNEFLKRYEPVRDAAHKLASDPTAMRS
                     LTESLRTGADPAAAGIGVPDDTARTLGSLLRVDAGYGHATRRLAELDYQMNGLLAAIA
                     ELEEANRRLSDPKGLRAQAAGPLGMSNAEQQARVDAQIAELRRLIREAERNNRQADLS
                     ALQKELEALEVRARVARDAEQAFARPATNGAAAGADLGVLLVQDESRAADLYTSSQGV
                     RKQVEAEQLALAKDAFERLDRRLTRLLRRARLGRVETVLGKKRALEI"
     gene            complement(2010..2822)
                     /locus_tag="VLJ38_07005"
     CDS             complement(2010..2822)
                     /locus_tag="VLJ38_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39296.1"
                     /translation="MRARRGWVRLLGLGMLLCAVSVEAQPNKARVGRSPKSAPASKPS
                     AASAPAASESSKPDSAKTETAAPGESAPATSGSASVTSGDDLGAPPPKQTNETSGPRK
                     SPLTPEPNEFPQGAPKPPPPAYDQLLSDIAALRSRVAAVTTTLFSSKLRVLVSVDGDD
                     ARIASFRVTLDDGVVYAAPENFGGGEPLVVYEHAVAPGHHMLGIEIERYDARNREYRT
                     YQSSKFSVVVPESKHLESSFRIKDASDMAGDFPKGHDGEYDLRVRLRARVVD"
     gene            complement(2976..>3569)
                     /gene="gpmA"
                     /locus_tag="VLJ38_07010"
     CDS             complement(2976..>3569)
                     /gene="gpmA"
                     /locus_tag="VLJ38_07010"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF010713.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004619 - phosphoglycerate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HSU39297.1"
                     /translation="AYTSVLKRAIKTLWIVLEELDRMWIPVTRSWRINERMYGALQGL
                     NKAETVARHGEDLVKTWRRSYDVPPPALDETNEYYPGKDPRYASLSPNEVPRTECLKD
                     TVNRFLPFWEREIAPQVKRGQRVIIAAHGNSLRALVKHLDNVSDTDIVELNIPTGIPL
                     VYELDDNLRPIKPGYYLGDPEAAEKAAKAVANQLKGG"
BASE COUNT          512 a         1253 c         1188 g          616 t
ORIGIN      
        1 gatctcgagc gcgcgcttct tgccgagcac tgtctcgacg cgcccgagcc gcgcgcggcg
       61 caagaggcgc gtgagccggc gatcgagccg ctcgaacgcg tctttggcga gcgcgagctg
      121 ttccgcctcg acctgtttac gtaccccctg cgacgacgtg tagagatcgg ccgcgcgcga
      181 ttcgtcctgt acgagcagca cgccgagatc ggcgccggca gccgcgccgt tcgtcgccgg
      241 ccgcgcaaaa gcttgctcgg cgtcccgcgc cacccgcgcg cgcacttcga gcgcttcgag
      301 ctccttttgg agcgcactca aatccgcctg tcgattgttg cgctccgcct cgcggatcaa
      361 ccggcggagc tccgcgattt gcgcgtccac gcgcgcctgc tgctccgcgt tgctcatgcc
      421 gagcggtccc gcggcttgcg cgcgcagacc tttcggatcg ctcaagcgcc ggttcgcttc
      481 ctcgagctcg gcgatcgcgg cgagcaagcc gttcatctgg taatcgagct cggcgagccg
      541 gcgcgtcgcg tgtccgtacc cggcgtccac gcgcaagagc gagcccagcg tgcgcgccgt
      601 gtcgtccggc accccgattc ccgccgccgc cggatcggcg cccgtgcgga gcgactcggt
      661 gagcgagcgc atcgcggtgg gatcggacgc gagcttgtgc gccgcgtcgc gcaccggctc
      721 gtagcgcttc agaaactcgt tcagcttgtg gtcagcctgc ggaaagcggc agagcgctag
      781 atcgatgtac gagtccaaaa tccaggcttc atcctcgtac ggatggttcg tcgagacgcg
      841 atggagctcg tccatggcgt cgcgcgcgcc gcgataatcc ttcgcttcgt agcgtgtcgt
      901 cgccgtctcg tagagcgcct ccggcagccg ctccgaatcg tgcggcacga ggtagtaata
      961 gtaacgcgcg tcgtcgaagc gatactgttc gtgcgcgacc cgcccgagcc cgagccgcgc
     1021 gagatcacgc acccggaaaa aatcgctgcc gccgaagaac gccgcgtgct tcggcgtgag
     1081 cttcggctcg gcgaccttgc agaacgcgtt ctcgccttct ttgtagcgct tctgctcgac
     1141 ttcgatcacg ccggtcaggt acgtcgcctg cgcccaaaag cgcgagcgat cgctcacctt
     1201 ggcgtattcg gtgagcgcgt cgttcggctt gccttcgctc tccgccgtac gtcccgcgag
     1261 gtacgaaatg tcgccccgga tctcgtcgct cgcgctcggc ggcacggcgt cgaggtccgt
     1321 caaaaagacg cgcggtcgct cactgtcgag cccgaagtcg acgagcgaat gcacggcgcg
     1381 ccggtacgcg ctttcgctcg gatcgccctg caaaagcccc accaaatacg cacgcgccac
     1441 gtcgtgcgcg ccgccgcggc ctagcgcgtc cccgagcaga aagcgcgccg tcttgccttc
     1501 ggtcgactgc gcgaacggcg caaagcgcgg cgattcgacg atgtacacga gatcaccgat
     1561 cgcttcgtca cgccggcccg cggcgatctc gtcttcgatg cgcgcgagct cgtcacgcag
     1621 gcgctggatg ctgagcgact cggtcgcggc gaggcgccgc tgctcgagcg ctttttggta
     1681 cgccatgaac gcggagccgc gcgtgtcgag gccgggcggc gccgctccgg tcgccgcagc
     1741 ggcgtcgggc ggtatggacg agccgggcgg tgtggacgag ccgggcggcc cgttcgtcac
     1801 ggacgcagcg ctcggcgcgt tcgcactcgg tgcagcggac gcggcgttcg gcgcgaacgc
     1861 accgggcgtc gtcgctgcac tgggtcccgg cgtggcaggc gcgggtttcg gcccctgcgc
     1921 gccggcacgc gccgcgaacg tcatcgcccc ggccagcgcg aacaccgaga cggagcgcag
     1981 cgccaggcgc gagccgcgtc gccgctcgtt caatcgacca cccgcgcgcg caggcggacg
     2041 cgtagatcgt actcgccgtc gtggcctttc gggaagtccc ccgccatgtc cgaagcgtcc
     2101 ttgatgcgga agctcgattc gaggtgcttg ctctccggca cgaccacgct gaatttcgag
     2161 ctctggtagg tgcggtactc gcgattgcgc gcgtcgtagc gctcgatttc gatgccgagc
     2221 atgtggtgtc ccggcgcgac ggcgtgctcg taaaccacga gcggctcacc cccgccgaaa
     2281 ttctccggcg cggcgtacac gaccccgtcg tcgagcgtca cgcggaagct cgcgatgcgc
     2341 gcgtcgtcgc cgtcgacgct gacgagcacg cgcagcttgc tcgaaaagag cgtcgtcgtg
     2401 acggccgcga cgcggctccg gagcgccgcg atgtcggaga gcagctgatc gtaggccggt
     2461 ggcggcggct tcggtgcgcc ttgcggaaac tcgttcggtt cgggcgtgag cggcgacttg
     2521 cgcgggccgg acgtctcgtt cgtctgcttc ggcggtgggg cgccgaggtc gtcccccgaa
     2581 gtcacgctcg cgctgccgct cgtcgcgggc gcgctctcac cgggcgcggc cgtctcggtc
     2641 ttcgcgctgt ccggcttcga gctttcactc gccgcgggcg ccgaagccgc gctcggtttc
     2701 gaggcgggcg cgctcttcgg cgaccgcccc acgcgcgcct tgttcggctg cgcctccacg
     2761 ctgaccgcgc aaagcaacat cccgagccca aggagccgaa cccagccacg ccgtgcccgc
     2821 atgagaccgt acgaagctac cacggtcgcc gcgcatcaga cacagcgatg cggggcgttc
     2881 accaacacct tcatcgacac gcacctacat tggcgacagc cgagcgagag ctcgctcact
     2941 cgcgtcgagt ctcgcgcgct agccgccctt gacgcctagc cgccctttaa ttgattggcg
     3001 acggctttgg cagctttctc ggccgcttcg ggatcgccca aatagtagcc gggcttgatg
     3061 ggacgcaggt tgtcgtcgag ctcgtaaacg agcgggatcc ccgtcgggat attgagctcg
     3121 acgatgtccg tgtcgctcac gttgtcgagg tgcttgacga gcgcgcgcaa actgttgccg
     3181 tgcgccgcga tgatgacgcg ctgcccacgc tttacctgcg gcgcgatctc gcgctcccag
     3241 aacggtaaga agcgattgac cgtgtccttc aagcactcgg tgcgcggcac ctcgttcggc
     3301 gaaaggctcg cgtagcgcgg atccttgccc gggtagtact cgttcgtctc gtcgagcgcg
     3361 ggcggcggca cgtcgtagct gcggcgccag gtcttcacga gatcctcacc gtgccgcgca
     3421 acggtctccg ccttgttcag accctggagc gcgccgtaca tgcgctcgtt gatgcgccag
     3481 ctgcgtgtca ccggaatcca catccgatcg agctcctcga gcacgatcca gagcgtcttg
     3541 atcgcgcgct tgagcaccga ggtgtacgc
//
LOCUS       DATIML010000405         6875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5281291, whole genome shotgun sequence.
ACCESSION   DATIML010000405 DATIML010000000
VERSION     DATIML010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6875
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5281291"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1066
                     /locus_tag="VLJ38_07015"
     CDS             <1..1066
                     /locus_tag="VLJ38_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SbcC/MukB-like Walker B domain-containing
                     protein"
                     /protein_id="HSU39298.1"
                     /translation="SERELLSDARSRREVLIDRLLRARGGQALAEELARRFSSDSDVL
                     ASYIAAWKEVTVWLGRRLPAQVAEVAEPLRALERLRDHLALLEERLGRQELDLRGASE
                     DVARGIEVKLRRATGQVRRLNQHLEGISFGSIARIRVEMRRVERMDQILRALREGQAQ
                     ELLFQTSLPVEEALDEIFRRYGGGKSGGQRLLDYREYLELEVAVERKAKPGFEAVSPT
                     RLSTGEAIGVGAALMMVVLTEWERDANLFRNRRTEGTLRFLFLDEANRLSQDNLGVLF
                     DLCQTLELQLLIAAPEVARATGNTTYRLVRQVAPDGSEEVIVTGRRATPSTADAAIAE
                     PGELAVAPDANGPLFAAPSN"
     gene            1140..2153
                     /gene="gnd"
                     /locus_tag="VLJ38_07020"
     CDS             1140..2153
                     /gene="gnd"
                     /locus_tag="VLJ38_07020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HSU39299.1"
                     /translation="MIGCGRMGANMVRRLMRHGHDCVVFDRSPESVAALVKEGARGAA
                     SLAEFVAGLERPRAVWLMVPAGVVDATILELTQVLEPGDICIDGGNSYYVDDIRRARE
                     LGVHGIHYVDVGTSGGVWGLERGYCMMIGGELECVRRLDPIFAALAPGAGTIGRTAER
                     PENSGTAEQGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGFGVLRAAGVGKSERPHD
                     AETTPLRNPEHYRYDFDLRDISEVWRRGSVIASWLLDLTAEALVRDADLERFSGHVSD
                     SGEGRWTLQAAIDEGVPVPVLSAALYQRFSSRGEGDYQARLLSAMRFGFGGHVEKPRD
                     DKT"
     gene            complement(2155..3993)
                     /locus_tag="VLJ38_07025"
     CDS             complement(2155..3993)
                     /locus_tag="VLJ38_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 44 protein"
                     /protein_id="HSU39300.1"
                     /translation="MRSLAIAGGGYLVTCGLLALACGSKDSGTADKDSGQAAMTSGGM
                     GAAGGNSNGASSGTGGSGGMAQAGSAGLATAGGSGGAANGGKTGSAGRAGGSSMLGPI
                     VEPGDPGKADVTLAVRADTDVHPISALIYGINGDCSDANKHPTLCRSGGNRLTAYNWE
                     NNASNAGSDWCFENDGLLGDTDQAGKVATDMLASARGNGGTVLLTVPIVDYVAADKTG
                     GSDPPACSGDVRKSGADYLTTRFKKNLPKKSGTLTTTPDATDDSVYEDEFVAFVKGKA
                     GSQPVLFSLDNEPDIWAATHAEVHPDPVTYDELVERDADFAEAIRSVWPEAGITGFVS
                     YGYSGYVNLQSAPDASGKGEFIDYYLSELRSRSNAAGHRLIDYLDLHWYPEATGGGQR
                     IITDDSSAAVADARVQAPRSLWDPNYEETSWITSYTGGPIALIPWLMGKIQKADPDML
                     LAFTEWNYGGSNDISGAVAAADVLGVFGREGVALASLWSLSDNERFIEGAFQVFRDYD
                     GAGSTFGDTSIHAESSAIDRASVYASMGSDDVNHVVIVAINRDKADLKAALTVAHSAV
                     FTAADVWRLSASSPSPAAAPALHSVATNAFNTTLPARSISIVVPRP"
     gene            4324..4986
                     /locus_tag="VLJ38_07030"
     CDS             4324..4986
                     /locus_tag="VLJ38_07030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39301.1"
                     /translation="MANPRIPSDYWDDNEQEELHYPNATPRRVAFAHALGVVGVLGTF
                     ALAAFAFAPRMPFIESKLHSLFSKDEPALRPAEPVTQVTVTSPPAPSVAVPPVAAPAA
                     PEATVTEPSTASAAATAPEPAVAAAPEPAVATPSPVVAAAPQPAVVAAPAAPTSAPAL
                     ASDADSKAAAPSAKPASRSLASSTVRKAPRSEPPLTVREIERRKERYETWLKQEGLEP
                     VR"
     gene            complement(4988..6001)
                     /gene="galT"
                     /locus_tag="VLJ38_07035"
     CDS             complement(4988..6001)
                     /gene="galT"
                     /locus_tag="VLJ38_07035"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008108 - UDP-glucose:hexose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HSU39302.1"
                     /translation="MPETALRFDVTTDDWVVFASGRSARPIEHPTRSEAPPPSVPDRA
                     CPFCPGNEASTPPAIDVEPDPSNPERWAVRVFPNKFPALRPDASRARDRSQPLFRQMG
                     GLGVHEVVVCSPDHGWSLARLPVEQVTAILRVLHRRHRVLGADPELEVVQIFENHGAR
                     AGSSLSHPHLQIIAAPVVPRLIRLKYQVAAEYYHAQGVSLYEDLCQAELAAKSRVILD
                     TPEFVAFAPFASRIPYETWIVPREPKPSFGLAEPHSLPALARTLRELLQRLQVALGDP
                     AYNLTFFGAPRRHSDEPDFGWHIAVLPRLEIAAGFEFATGMAINSVLPEVAAEVLRRV
                     EVE"
     gene            complement(6132..6794)
                     /locus_tag="VLJ38_07040"
     CDS             complement(6132..6794)
                     /locus_tag="VLJ38_07040"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSU39303.1"
                     /translation="MSNTSRPMNKVTVVEEGTEFRGTLTSSCPVDVRGRVEGELATPT
                     LTVSASGAVHGRAKVGEVRSLGEISGEFDAERVELAGVVRDNTVIRARSLDVKLASER
                     GKLQIIFGECELSVGEEPREADHAVEPAVHVAAPAPAPMLEAPAAALEAPAEMAAVVA
                     NADSALAPNAAEEEADEDGDEASEMAPAAGGKKGKRRKKNGHEEPVAGWSQPPSQPPP
                     AN"
BASE COUNT         1062 a         2333 c         2335 g         1145 t
ORIGIN      
        1 gagcgagcgc gagctcttgt cggacgcgcg cagccggcgt gaggtgctga tcgatcggct
       61 gctcagagca cgcggcggtc aagccctcgc cgaggagctc gcgcgacgct tctcttcgga
      121 ctccgacgtg ctcgcgagtt acatcgcggc ctggaaagaa gtcaccgtgt ggctcggccg
      181 ccgcttgccc gcccaggtgg ccgaggtggc cgagccgctg cgcgcgctcg agcggctgcg
      241 cgaccacctc gccctgctcg aagagcgtct cggtcgccaa gaactcgatc tgcgcggcgc
      301 gtccgaggac gtagcgcgcg ggatcgaggt gaagctgcgg cgcgccacgg ggcaggttcg
      361 gcgcctcaac caacacctcg agggcatcag cttcggcagc atcgcgcgca tccgcgtgga
      421 gatgcggcgc gtcgaacgca tggaccaaat cttacgtgct ctgcgcgaag ggcaagcgca
      481 agagctcttg ttccagacgt ccctccccgt cgaggaggcg ctcgacgaaa ttttccggcg
      541 ttacggcggc ggtaagagcg gcggccaacg tctgctcgac tatcgcgaat acctcgagct
      601 cgaagtcgcc gtcgagcgca aggccaagcc cgggttcgaa gccgtgagcc ccacgcgcct
      661 ttcgaccggc gaagccatcg gtgtcggcgc ggcgctcatg atggtcgtgc tcaccgagtg
      721 ggagcgggac gcgaacctct tccgcaaccg ccgcacggaa ggcacgctgc gttttctctt
      781 cctcgacgaa gccaatcggc tctcgcaaga taacctcggc gtactcttcg acctttgcca
      841 aacgctcgag ctccagctct tgatcgccgc ccccgaggtc gcccgcgcga cgggtaatac
      901 gacttatcgt ctcgtgcgcc aggtcgcccc cgacggcagt gaggaagtca tcgtcacggg
      961 tcgtcgcgcg acgccgtcga ccgccgacgc agccattgcc gagccgggcg agctcgccgt
     1021 cgcacccgac gcgaacgggc cgctcttcgc tgcgccgagc aattgagctc ggaggcttgc
     1081 atcacgcgta ccgagtcggc cacactgcac ggacgactgg agttcccatg cagctcggaa
     1141 tgattggatg tggacgaatg ggcgccaaca tggtgcggcg gctgatgcgt cacggccacg
     1201 actgtgtcgt cttcgatcgc tcaccggaga gcgttgcggc tctcgtgaaa gagggcgcgc
     1261 gcggcgcggc atcgctggcg gagttcgtgg cagggctcga gcggccgcgc gccgtgtggc
     1321 tgatggtacc cgcgggcgtc gtcgacgcga cgatcctcga gctcacgcag gtgctcgaac
     1381 cgggtgacat ctgcatcgac ggcggcaatt cctattacgt cgacgacatc cgtcgcgcgc
     1441 gcgagctcgg cgtgcacggt atccactacg tcgacgtggg cacgagcggc ggcgtctggg
     1501 gcctcgaacg cgggtactgc atgatgatcg gcggcgagct cgaatgcgtg cgccgtctcg
     1561 atcccatctt tgccgcgctc gctcccggcg cgggcacgat cggccgcacc gccgagcgtc
     1621 cggaaaactc cggcaccgcc gagcaagggt acttgcactg cgggccgagc ggcgccggtc
     1681 acttcgtgaa gatggtgcac aacgggatcg aatacggtct catggcggcg tacgccgagg
     1741 gcttcggcgt gctgcgcgcg gccggcgtcg gcaagagcga gcgcccgcac gacgccgaga
     1801 cgacgccgct ccgcaacccc gagcactacc gctacgactt cgatttgcgc gacatctccg
     1861 aggtctggcg gcgcgggagc gtcatcgcgt cctggctgct cgatctcacc gccgaagcgc
     1921 tcgtgcgcga cgccgacctc gagcgcttca gcgggcacgt gtccgattcc ggcgagggtc
     1981 gctggacgct ccaggccgcg atcgacgaag gcgtgccggt ccccgtgctc tcggcggcgc
     2041 tctaccagcg cttcagctcg cgcggcgagg gcgattacca ggcgcgcttg ctctcggcca
     2101 tgcgcttcgg cttcggcggc cacgtcgaga aaccgcgcga cgataagacc taaactacgg
     2161 cctcggcacc acgatcgaaa tcgagcgcgc gggcaacgtc gtgttgaagg cgttggtcgc
     2221 cacgctgtgc agggcgggcg cggcggcggg tgacggcgag ctcgccgaga gcctccacac
     2281 gtcggccgcc gtgaagaccg ctgaatgcgc gacggtgagc gccgctttga ggtccgcttt
     2341 atcgcggttg atggcgacga tcacgacgtg attcacgtcg tccgagccca tgctcgcgta
     2401 cacgctcgct cggtcgatgg cgctcgactc ggcgtgaatc gaggtgtcgc cgaacgtgct
     2461 ccccgcgccg tcgtagtcgc ggaacacctg gaaggcgccc tcgatgaagc gctcgttgtc
     2521 gctgagactc cagaggctcg cgagcgccac gccctcgcgc ccgaacacgc cgagcacgtc
     2581 ggccgcggcc acggcgccgc tgatgtcgtt cgacccgccg tagttccact ccgtgaacgc
     2641 gagcaacatg tctgggtcgg ccttttggat cttccccatc aaccagggaa tgagcgcgat
     2701 gggaccgccc gtgtagctcg tgatccagct cgtttcctcg tagttggggt cccagagcga
     2761 gcgcggcgcc tgcacgcgtg cgtcggcgac agccgcgctc gaatcgtcgg tgatgatgcg
     2821 ctgtccgccg cccgtcgctt ctgggtacca gtgtaaatcg aggtaatcga tcaagcggtg
     2881 acccgcggcg ttcgagcgcg agcggagctc gctcaggtag taatcgatga actcgccctt
     2941 gccggacgcg tcgggcgccg actgcaggtt cacgtagccg gagtagccgt agctcacgaa
     3001 gccggtgatg ccggcctcgg gccagacgga acggatagct tcggcaaagt ccgcgtcgcg
     3061 ctcgacgagt tcgtcgtacg tgaccggatc ggggtgcacc tccgcgtgcg tcgcagccca
     3121 gatatccggc tcgttatcga gggaaaatag cacgggttgt gagccggctt tgcctttgac
     3181 gaaggcgacg aactcgtcct cgtacacgct gtcgtccgtt gcgtcgggcg tcgtcgtcag
     3241 tgtgccgctc ttcttcggga ggttcttttt gaagcgggtc gtgaggtagt cggcgcccga
     3301 tttgcggacg tcgccggagc aggcgggcgg atccgagccg cccgtcttgt ccgccgcgac
     3361 gtagtcgacg attgggaccg tcaaaagcac ggtgccgccg ttgccgcgcg cgctcgcgag
     3421 catgtcggtc gcgaccttgc ccgcttgatc ggtgtcgccg agcaagccgt cgttctcgaa
     3481 gcaccaatcg ctgcccgcgt tcgacgcgtt gttctcccaa ttgtacgccg tgaggcgatt
     3541 gccaccgctg cggcagagcg tcggatgctt gttcgcgtcc gagcagtcgc cgttgatgcc
     3601 gtagatgagc gcggaaatcg ggtgcacgtc cgtgtcggcg cgcaccgcga gcgtcacgtc
     3661 tgccttgccg ggatcgccgg gttccacgat gggaccaagc atgctcgagc cgcccgcacg
     3721 ccctgcactg ccggtcttcc caccgttggc ggctccgccg ctgccgcccg cggtcgcgag
     3781 cccagcgctg ccggcctgag ccatgccgcc gctgccgccg gtcccgctgc tcgcgccgtt
     3841 gctattgccg ccagccgccc ccatgccacc gctggtcatc gcggcttgtc ccgaatcctt
     3901 gtccgcggtg ccactgtcct tggagccaca ggcaagcgcg agcagtccac aggtgacgag
     3961 atagccgccg ccggcaatgg ccaaagatcg catgcttaga aggctacact acgtcgttcg
     4021 acgttcggga agggggaacc ttgcttcgcc agcgtgagca tttattcatc ctggccgggg
     4081 ccgcagaccc ggagggcggt gccggacgcg tgaaactccc gagcaacttg gcgcacttcc
     4141 gtcgacggtc gaacgctgag ccacggcacc actccgaggc gttctggcgc gcaccgcctg
     4201 gcgcgtgcgg cgtcgagtct agcgcgacgc cggaagtgct agtctaggcg ccgattcgag
     4261 ggactgggtt caatcacact gattttcggg cgctggcacg ctcgatgcac tgagtgaggg
     4321 cgcatggcga atccgagaat accttccgac tactgggacg ataacgagca ggaggagctc
     4381 cattatccga acgccacgcc gcggcgcgtt gcgttcgcac acgcgcttgg cgtggtgggc
     4441 gtgctcggaa cctttgcact tgccgccttc gcctttgcgc cgaggatgcc gttcatcgag
     4501 agcaagctcc actcgttgtt ctccaaagac gagccggcgc tgcgcccggc cgagccagtg
     4561 acgcaggtga ccgtaacgag tccgccagca ccgagcgttg ccgttccgcc ggttgccgcg
     4621 ccggccgctc cggaggcaac cgtcacggag ccgtcgacgg cgtccgccgc cgcgactgcg
     4681 ccggagccgg ccgtcgctgc ggcgccggaa cccgccgtcg ctacgccgtc gcccgtcgtc
     4741 gctgcggcgc cgcaaccggc cgtcgtcgct gcaccagcgg cgccgacttc cgctcctgcc
     4801 cttgcctcgg acgcagattc gaaagccgcc gcgccaagcg cgaaacccgc cagccgctcg
     4861 ctcgcatcct ccaccgtccg taaggccccg cgctctgagc caccgcttac cgttcgggag
     4921 atcgagcgcc gaaaagagcg ctacgaaacc tggctcaagc aagagggcct cgagcccgtt
     4981 cgctgagtca ctcgacttcg acgcgccgta acacctcggc ggcgacttcc ggtagcacgc
     5041 tgttgattgc catgccggtc gcgaactcga agcccgcggc gatctccaga cgcggcagca
     5101 cggcaatgtg ccagccgaag tccggctcgt cgctgtgacg gcgcggcgca ccgaagaagg
     5161 ttagattgta cgctggatcg ccgagcgcga cctgtagccg ctgcaagagc tcgcgcaacg
     5221 tgcgggcgag tgcgggcagc gagtgcggct cggcaaggcc gaagctcggc ttgggttcgc
     5281 gcggcacgat ccaggtctcg taagggatac gggacgcgaa gggggcgaac gcgacgaact
     5341 ccggcgtgtc gaggatcacg cgcgatttcg cggcgagctc cgcttgacac aggtcctcgt
     5401 aaagactcac gccctgagcg tggtagtact cggccgccac ctggtatttg aggcgaatca
     5461 accgcggaac caccggcgcg gcgatgattt ggaggtgtgg gtgcgacaag gacgaaccag
     5521 cacgcgcccc gtgattctcg aagatttgca cgacctcgag ctcgggatcg gcgccgagca
     5581 cgcgatggcg tcgatggagc acccgcagaa tcgccgtcac ttgctcgacc ggcaaacgcg
     5641 cgagcgacca accgtggtcc ggcgagcaaa cgacgacctc gtggactccc aagccgccca
     5701 tctgacgaaa gagcggctgc gagcggtcgc gggcgcgcga cgcgtcggga cggagcgccg
     5761 ggaatttgtt cgggaacacg cgcacggccc agcgctcggg attgctcggg tcgggctcga
     5821 cgtcgatggc gggcggcgtg ctcgcttcat tgccgggaca gaacgggcag gcgcggtccg
     5881 gcacggatgg cggcggggct tcgctccgcg tcggatgctc gatgggacga gcggagcgtc
     5941 cgctcgcgaa caccacccaa tcatccgtcg tcacgtcgaa gcgcagcgca gtttccggca
     6001 tgcgccgcct actctgccac gacgcgcagg tgcttcgacc cggcgcgtgc agcgcaaaat
     6061 cttgtgctcg tcacgtgcgc ctgctcggtc cggaggctag accgagcagg gcgcgagggg
     6121 aatccgtgcg ctcagttcgc gggtggcggc tgcgagggcg gctgcgacca gccggcgacg
     6181 ggctcttcgt ggccgttctt cttgcggcgc ttgcccttct tgccaccggc tgccggcgcc
     6241 atctcgctcg cttcgtcgcc gtcttcgtca gcctcttctt ccgcggcgtt cggcgcgagg
     6301 gcggagtccg cgttggctac gacggccgcc atttcggccg gtgcctcgag cgcggcggca
     6361 ggtgcctcca gcatcggcgc gggagcaggc gcggcgacgt gaacggcggg ttcgacggcg
     6421 tgatcggctt cgcgcggctc ctcgccgacg ctgagctcgc actcgccgaa aataatctgc
     6481 agcttgccgc gttcgctcgc gagcttcacg tcgagcgagc gcgctcgaat caccgtgttg
     6541 tcacgcacga cgccggcgag ctcgacgcgc tcggcgtcga actcacccga aatctcgccg
     6601 agcgagcgca cctcgccgac tttggcgcgg ccgtggacgg cgccgctcgc gctcaccgtg
     6661 agcgtcggcg tcgcgagctc gccctcgacg cgaccgcgca cgtcgacggg acaggacgag
     6721 gtgagcgtcc cgcggaattc ggtgccctcc tcgacgacgg tgaccttgtt catggggcga
     6781 ctcgtgttgc tcatactgct tgctccttcg tgttcattcg gctgccgccg ccgtgcgcgg
     6841 gtgcaggatc ttcatgcgca ggcggcagcc cggct
//
LOCUS       DATIML010000406         1723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3258794, whole genome shotgun sequence.
ACCESSION   DATIML010000406 DATIML010000000
VERSION     DATIML010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3258794"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VLJ38_07045"
     CDS             <1..194
                     /locus_tag="VLJ38_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39304.1"
                     /translation="LGFSMLAIWLRQRSHETATIGTGGGATTPAERHFPTLIVGGHGV
                     LAAATLVLVLLTAAGVGGS"
     gene            208..837
                     /locus_tag="VLJ38_07050"
     CDS             208..837
                     /locus_tag="VLJ38_07050"
                     /inference="COORDINATES: protein motif:HMM:NF019533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1684 domain-containing protein"
                     /protein_id="HSU39305.1"
                     /translation="MTPSELDLLGYKREVQALYARVRAEPDPERAFATWVAARDELFA
                     RHPQSALPPESRAGFRGLSYFPHDPAGRVPADVEPRPRRQLGVGASNDGTIAFEVFGV
                     ARFTLGEVACELELYWLSGYGGGLFVPFRDATAGTETYGGGRYLLDTVKGADLGMSDG
                     RLVLDFNFAYNPSCSYDPRWTCPLAPPANHLSIPVRMGERDPEPASVVE"
     gene            1065..1574
                     /locus_tag="VLJ38_07055"
     CDS             1065..1574
                     /locus_tag="VLJ38_07055"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HSU39306.1"
                     /translation="MRAAWQRGMLELYEVRAALEEFATRAATPVLRDDTSELWTEIDG
                     MAQAAQRNDIPGVVEHSERFHRIIVEASGNQQLLNVWSSLGITDHTELTMVALRIDVS
                     SIAESHKPIVEAIAAGDVELACREAREHQRFFEQEMAEQTHAESLGDDATERESADGG
                     PAGGPSLSA"
BASE COUNT          266 a          606 c          586 g          265 t
ORIGIN      
        1 tgctgggctt cagcatgctc gccatttggc tgcgccagcg atcgcacgag acggcgacga
       61 tcggtacggg cggcggcgcg acgaccccgg ccgagcgaca cttcccgacg ctcatcgtcg
      121 gcggtcacgg cgtgctggcc gcggcgacgc tcgtgctggt cctgctcacg gccgccggcg
      181 tcgggggctc gtgaaacgct cccgctcgtg acgccgtccg agctcgatct cctcggctac
      241 aagcgggagg tccaggcgct ctacgcgcgc gttcgcgcgg agccggatcc cgagcgcgcg
      301 ttcgcgacat gggtggcggc ccgcgacgag ctgttcgcgc gtcacccgca gtccgcgctc
      361 ccaccggaga gccgggccgg gtttcgcggc ctgtcctact ttccgcacga cccagccggg
      421 cgcgtacccg ccgacgtcga gcctcgcccc cgccgccagc tcggcgtcgg cgcgagcaac
      481 gacggcacca tcgcgttcga ggttttcggc gtcgcacgct tcacgcttgg cgaggtcgcg
      541 tgcgaactcg agctgtactg gctcagcgga tacggcggcg gactgttcgt gccatttcgc
      601 gacgcgacgg ccggcaccga gacgtacgga ggcggtcgct atctgctcga caccgtcaag
      661 ggcgccgatc tcgggatgag cgacggacgc ctcgtgctcg acttcaactt cgcctacaac
      721 ccgtcctgtt cgtatgaccc tcgttggacg tgtccgttgg caccaccggc gaatcacctt
      781 tcgatcccgg tgcgaatggg cgagcgcgac cccgaacccg ccagcgtcgt cgagtgatgc
      841 acggcacgca ccggggtaag cgcgtcacac gccgagcgtt gcgtcacgag atccgtgacg
      901 ggctcgtccg ctcgatcctt gacggcgagt atgcgccggg cgaccggctc atcgagatgc
      961 gcatcgccaa ggagtacggc acgagccagg gcccggtccg tgaagcactc cgcgagctcg
     1021 agatcctcgg cttcgtccag agccggcccc accgcggcac ctacgtgcgc gccgcttggc
     1081 agcgcggaat gctcgagctg tatgaggtgc gcgccgcgct cgaggagttc gccacccgtg
     1141 ctgcgacgcc cgtgcttcgt gacgacacgt cggagctctg gaccgagata gacggcatgg
     1201 cgcaggcggc tcagcgcaac gacatccccg gggtcgtcga gcacagcgag cgctttcacc
     1261 gcatcatcgt cgaagcctct ggcaatcagc agctgctcaa cgtctggagc agcttgggca
     1321 tcacggacca caccgagctg accatggtgg cgctccgaat cgacgtctcg agcatcgcgg
     1381 aatcgcacaa gccgatcgtc gaggcgatcg cggccggaga cgtcgagctc gcgtgccgcg
     1441 aggcgcgcga gcaccagcgc ttctttgagc aggagatggc cgagcagaca catgccgagt
     1501 cgctcggcga tgacgccact gagcgggagt cggccgacgg cgggcctgcc ggcgggccgt
     1561 cgttgtctgc ttgaggcctt ttcaccgtcc cggtcgctac gacgacgcgc caacgagcgc
     1621 atcacacgcc ggtgcggcgg ccgtgagtcg atttgcgccc gtgtccgatc cgaagcgagg
     1681 aacgcgacgc gttgcgcacc ggccgaacgg acgccgagac acc
//
LOCUS       DATIML010000407         3423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5282138, whole genome shotgun sequence.
ACCESSION   DATIML010000407 DATIML010000000
VERSION     DATIML010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3423
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5282138"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2021)
                     /locus_tag="VLJ38_07060"
     CDS             complement(<1..2021)
                     /locus_tag="VLJ38_07060"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSU39307.1"
                     /translation="MLDRGILLAEASLSLVVVAVMVLIAALDSAAALLHLSITWLHIA
                     PDVLMHGCIWAALLGASYATRERRHLAIDALGRLLPDRTRRVVVAVAATFGAVVAFTL
                     ARGLYLTLLEQVANMHEQLRLLAERGVGQGDVDRSYEFQFVIPGAFVLIGARLLLHAF
                     HEWVAALGNLPRDAEPKPNPVEPETERAAPVSQASATEVVIALIFLVLLLPFAVGTTV
                     FGPLLLAELATAAVIGVPLLLRKQRTGSWAPERASEARYAENATLGQVGAALLGVFVV
                     LALLLFGAAQIPTIPIAWGVFFCAVMALMGAPLFSFLGGLALFLWAHGSDTVPAMSLP
                     NAVEDVLGPHFARMSVLPTIPVFTLAGYLMSEAKTPQRLVRVARALLGFAPGGLGIVC
                     ILASAFFTIFSGASGITIVAIGGLLLPALLKDRYPEKFSLGLVTTGGALGITFPPCLP
                     LIVYGIVAGLQEVPPGHERLALDKFLLAGLRPGALLIGLLVIYAAIIGIKSKVPRSHF
                     DAKEARAALWEAKWELVLPVFLLGGLATGVFSPVTAAAFTAFYVLVIEVFLYKDLSLT
                     RDLPRIVPDSMVLVGAIFVKLCAATVLTFYFVQAQTADRLFEALTCGPPAKAYLAAHA
                     DTMSTCREAVDALAEVGKSAGGIIDSPTTFLLALNVFLLVVGMLMDIFSA"
     gene            complement(2122..3129)
                     /gene="dctP"
                     /locus_tag="VLJ38_07065"
     CDS             complement(2122..3129)
                     /gene="dctP"
                     /locus_tag="VLJ38_07065"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HSU39308.1"
                     /translation="MMTKTNPIWPIALILVLLGYASLGVAEEKAGVKTLSIATLAPPG
                     STWMKVFEAWNREVRRRSNKTLELRFYAGGVQGDESEVIRKIRSGRLDGAAVTAVGLA
                     QIYRPALVFQMPGILKNYQQLDAARAALTPEMNPKFAESGFQMLGWADVGQSYVFSTQ
                     PVLKPSDLAARKPWVWRDDLVVPALFKVVKSNPVPLQLPEVLGALQTNRIDTVLATPV
                     AAVALQWQSRVSNMLDFPLTVVIGGTVLGQKQWDSLTPEQKTILSETSAQFHALARKN
                     LRADEEKALASIKERNVKVNTPSESDKAEWIKVGADVRKALTGQIADQALVDRVMAFS
                     K"
BASE COUNT          616 a         1117 c         1197 g          493 t
ORIGIN      
        1 gccgagaaga tgtccatcaa catcccgacc acgagcaaga acacgttgag cgcgagcagg
       61 aacgtcgtcg gggagtcgat gatgccgccc gcgctcttgc cgacttccgc gagcgcgtcc
      121 acggcttcgc gacaggtcga catcgtgtcg gcgtgcgcgg cgaggtaggc cttggcgggc
      181 gggccgcaag tgagcgcctc gaacaagcgg tcggcggttt gcgcctggac gaagtagaag
      241 gtgaggacgg tcgcggcgca gagcttcacg aagatggcgc cgacgagcac catcgagtcg
      301 ggcacgatgc gcgggagatc gcgcgtgagg gagaggtctt tgtagaggaa gacttcgatg
      361 acgaggacgt agaatgccgt gaaggccgcg gcggtgacgg ggctgaacac gcccgtggcg
      421 agaccgccga gcaagaagac gggcagaacg agctcccatt tcgcttccca gagcgcggcg
      481 cgggcctcct tcgcgtcgaa gtgcgaacgc gggactttgg atttgatgcc gatgatggcg
      541 gcgtagatga cgagcaggcc gatgagcagg gcgcccgggc gcagacccgc gagcaggaat
      601 ttgtcgagag cgaggcgttc gtggccgggc ggcacttctt gcaggcccgc gacgatgccg
      661 tacacgatga gcgggaggca gggcgggaag gtgatgccga gcgcgcctcc cgtcgtgacc
      721 aggccgagcg agaatttttc ggggtagcga tctttgagca gcgcggggag caacaggccg
      781 ccgatcgcga cgatcgtgat gccgctcgcg cccgagaaga tcgtgaagaa ggcggaagcg
      841 aggatgcaga cgatgccgag gccgcccggc gcgaagccga gcagcgcgcg cgcgacgcgc
      901 acgaggcgct gcggcgtctt ggcctcgctc atcagataac ccgcgagggt gaagacagga
      961 atggtcggca gcacgctcat gcgcgcaaag tgcgggccga gcacgtcttc caccgcgttc
     1021 ggcagcgaca tggccggcac ggtgtccgaa ccgtgtgccc agaggaacag cgcaagtccg
     1081 cccagaaagc tgaagagcgg cgcgcccatg agcgccatga cggcacagaa gaacacgccc
     1141 catgcgatcg ggatcgtcgg gatctgcgcc gcgccgaaca gcaagagcgc gagcacgacg
     1201 aacacaccga gcagggccgc gcccacctgc ccgagcgtcg cgttttcggc gtagcgcgcc
     1261 tcgctcgcgc gctccggcgc ccacgagccc gtgcgctgtt tacggagcag cagcggcacg
     1321 ccgatgaccg ccgcagtcgc gagctccgcg agcagcagcg gcccgaacac cgtcgtcccg
     1381 acggcgaacg gcaggagcaa caccaaaaaa atcagcgcga tcacgacttc cgtcgcgctc
     1441 gcctgcgaca ccggtgcggc tcgttccgtc tccggctcga cggggttcgg cttcggttcg
     1501 gcgtcgcgcg gcaaattacc gagcgccgcc acccactcgt gaaacgcgtg caacagcagc
     1561 cgcgcgccga tgagcacgaa cgccccgggg atcacgaact gaaactcgta gctgcgatcg
     1621 acgtcgcctt ggccgacgcc gcgctccgcg agcaggcgca gctgctcgtg catgttcgcg
     1681 acttgctcga gcagcgtgag gtagagcccg cgtgcgagcg tgaacgcgac cacggcgccg
     1741 aacgtcgccg ccacggcgac gaccacccgc cgcgtgcggt cgggcaaaag ccgcccgagc
     1801 gcgtcgatcg ccaagtgccg gcgctcgcgc gtcgcgtagc tcgcaccgag cagcgccgcc
     1861 caaatacagc cgtgcatcag cacgtccggc gcgatgtgca gccacgtgat cgagaggtgc
     1921 aagagcgccg ccgccgaatc gagcgcggcg atgagcacca tcaccgcgac gaccacgagg
     1981 ctcaggctcg cttccgcgag caagatgccc cgatcgagca cgtccagcgg gcggaagaat
     2041 ggcgctggtc gcgcggtcgg ggcggctcct gccatcgaga ctcgggttcg gcgctgctga
     2101 gaaggaccct ggacgctcgg attacttgct gaacgccatc acgcgatcga cgagcgcctg
     2161 gtcggcgatc tgaccggtga gcgccttacg cacgtcggcg ccgaccttga tccactcggc
     2221 tttgtcggac tcgctcggcg tgttcacctt cacgttgcgc tccttgatcg aagcgagcgc
     2281 tttctcttcg tcggcgcgca ggttcttgcg cgcgagcgcg tgaaactgcg ccgacgtttc
     2341 gctcaggatc gtcttctgct cgggggtgag cgaatcccac tgcttctggc cgagcacggt
     2401 gccgccgatc accacggtga gcgggaaatc gagcatgttc gagacccgcg actgccactg
     2461 cagcgcgacc gcggcgaccg gcgtcgcgag cacggtgtcg atgcggttcg tctgcagcgc
     2521 gccgagcacc tcgggcaact ggagcggcac ggggttcgat ttgacgacct tgaagagcgc
     2581 gggcacgacg agatcgtcgc gccacaccca gggcttgcgc gccgcgagat ccgacggttt
     2641 cagcaccggc tgcgtcgaga acacgtacga ctgcccgaca tcggcccaac cgagcatctg
     2701 gaaacccgac tccgcaaact tcgggttcat ctcgggcgtg agcgcggcgc gcgcggcgtc
     2761 gagctgctgg tagttcttga ggatgcccgg catctgaaag acgagcgccg ggcggtagat
     2821 ctgcgcgagc cctacggccg tgaccgcggc gccgtcgaga cggccgctcc ggatcttgcg
     2881 aatcacctcc gactcgtcgc cctgcacgcc accggcatag aagcgaagct cgagcgtctt
     2941 gttcgagcgg cggcgcacct cgcggttcca cgcctcgaac accttcatcc aggtcgagcc
     3001 gggcggcgcg agcgtcgcga tcgagagcgt cttcacgccg gctttctctt cagcgacgcc
     3061 gagcgaggcg tagccaagga gaacgagaat cagggctatc ggccagatgg ggtttgtttt
     3121 cgtcatcatc cgagtgctct cccgtcgcgg acgccggcct tcagcacggc tacggatcga
     3181 cggaactagg gaccgtatta ttcaaggagt aaagggattt agcgcgcggg tttcgcagcg
     3241 ggcgcgggtt tgccggcagg cgcgggagcg ggcgcaacag gcgccgaggc cgcggcggcc
     3301 ggctcgttcg ccaagcccag cggcacgctc acggtgtcgg cctcggtgaa cttcggccgc
     3361 ctgcatgtgc tgcccgtggt gaccgagttt ctggaccagc acccggccgt gacgggccgc
     3421 acc
//
LOCUS       DATIML010000408         3360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5282174, whole genome shotgun sequence.
ACCESSION   DATIML010000408 DATIML010000000
VERSION     DATIML010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3360
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5282174"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1391
                     /locus_tag="VLJ38_07070"
     CDS             <1..1391
                     /locus_tag="VLJ38_07070"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSU39309.1"
                     /translation="GYRGHVTAGGHVPTFCYRELLRDVPGLDTVVRHDGEETLVEVLH
                     RLGRGQVPRDIAGLVWRDGTEIVVGPVRHAAGELDALAWPARSPTPYTVGGFVVDFVI
                     TARGCVGECNYCSIAAYTSEHPKRYRLRKPEAVADEIAAQYRERGARVLFVQDDLFVL
                     PSEKRSVERIQRLTRALAERDVRDVVFWVKGRPETVTPAVATALREMGTIHLFLGVES
                     ASAERLSYLGRTHLPHQNVSALAACRAADIVPSFNFMLFDPDSSIEDLAVTLDLAEAN
                     PDLPWNVCRTEIYSGTALRDRLEAEGRLRGDYRSYGYQMLDPRAEVLFRILRVSLHER
                     ALAIESLLNRLISLSFARQLHEHFFPGPDSERLAVRSNAIGVEARLDTVRVLREALDF
                     VAGTDVHDAEKVRRFAIDQAFRVNAADRERRRQTEELWQYLHLRGRTLLQRRGLASAA
                     GERGDFRVAVGS"
     gene            complement(1494..2324)
                     /locus_tag="VLJ38_07075"
     CDS             complement(1494..2324)
                     /locus_tag="VLJ38_07075"
                     /inference="COORDINATES: protein motif:HMM:NF016584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0007275 - multicellular organism
                     development [Evidence IEA];
                     GO_process: GO:0030178 - negative regulation of Wnt
                     signaling pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dickkopf N-terminal cysteine-rich
                     domain-containing protein"
                     /protein_id="HSU39310.1"
                     /translation="MKPCCGTAAPPYDEAKCLAYAPTALDKADKKYDANEAGLCFDGL
                     KASAARCPGPTSYRGLPGACLRVYRGTLPLGMYCIHDSDCAPDPRGLVDCDLQTSECT
                     VQIRGKVGDACNQSCEILTDSGTCYPINDPSDPSVVVTCHDDDGLRCSFGGPFPSGST
                     PAPAAGTCQPALGLGCECILGGSSYCNGQTHCTDDLYSTCVARGDVGAPCTFDSDCSM
                     GNYCPETDVCTPMKHGGEPCTDHDECYGGYCWTSVCFLDNGDGRGSLDDKFCDGVGTE
                     "
     gene            2323..2808
                     /locus_tag="VLJ38_07080"
     CDS             2323..2808
                     /locus_tag="VLJ38_07080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39311.1"
                     /translation="MAAHASAGHCALNVASSILAGAGGFTAICVVSHEMAPVFPPVDD
                     PPAPDLPAPLPAPPAADAPLTAPVPAVLALPLAPTPADTDEPALPAAPLPAELAAPPL
                     APAPPVPIFDAPAWPDALASLSSLGAWLHCTRKSPSTVQKAAAPIVTCRSPMHARLPP
                     R"
     gene            2959..3216
                     /locus_tag="VLJ38_07085"
     CDS             2959..3216
                     /locus_tag="VLJ38_07085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39312.1"
                     /translation="MRWMVLASPLGAALLVTAGAAAQTFEFVPIAGGAVSDLAYDPHS
                     AGLVFAAVHGVGIYKSTDGQPGRQRCVWCRSRRSERWENLG"
BASE COUNT          509 a         1174 c         1131 g          546 t
ORIGIN      
        1 gcggctaccg cgggcacgtg acggccggcg gccacgtgcc gaccttttgc tatcgcgagc
       61 ttttgcgcga cgtgccgggc ctcgacacgg tggtgcgaca cgacggcgaa gaaacgctcg
      121 tggaggtcct gcatcgactc gggcgtgggc aggtgccgcg cgacatcgcc ggactcgtgt
      181 ggcgcgacgg cacggaaatc gtggtcgggc ccgtgcgaca cgccgcgggc gagctcgacg
      241 cgctcgcgtg gcccgcgcgg agccccacgc cgtacacggt gggcggcttc gtcgtggact
      301 tcgtcatcac cgcgcgcggc tgcgtcgggg agtgcaacta ctgcagcatc gccgcgtaca
      361 cgtccgagca ccccaagcgc tatcgcttgc gcaaacccga agcggtcgca gacgagattg
      421 ccgcccagta ccgcgagcgc ggcgcacgcg tgctgttcgt gcaagacgac ctgttcgtct
      481 tgccgagcga gaagcgcagc gtcgagcgca tccagcgcct gacgcgcgcc ctcgccgagc
      541 gcgacgtccg cgatgtcgtc ttttgggtca agggacgacc ggaaacggtg acgcccgccg
      601 tggccacggc gctgcgagag atgggcacga ttcacctctt tttgggcgtc gagagcgctt
      661 cggccgagcg tctgtcctac ctcggtcgca cgcacttgcc gcaccagaac gtctcggcgc
      721 tcgccgcctg ccgcgccgcc gacatcgtgc cgtccttcaa cttcatgctc ttcgatcccg
      781 actccagcat cgaagatctc gccgtcacgc tcgacctcgc cgaggcaaac cccgatctgc
      841 cgtggaacgt ctgccgcacg gaaatctact cgggcacggc gctgcgcgac cggctcgagg
      901 ccgagggtcg cctgcgcggc gactaccgca gctacggcta tcagatgctc gacccgcgtg
      961 ccgaggtgct ctttcgcatc ctgcgcgtga gcttgcatga gcgcgcgctc gccatcgaaa
     1021 gcttactcaa ccgcctgatc agcttgtcct tcgcgcgcca actccacgag cactttttcc
     1081 ccgggcccga cagcgagcga ctcgccgtcc gctcgaacgc catcggcgtc gaagcgcggc
     1141 tcgacacggt gcgcgtcctg cgcgaagcgc tcgacttcgt cgccgggact gacgtgcacg
     1201 acgccgagaa agtccgccgt ttcgcgatcg accaggcctt tcgcgtcaat gccgccgacc
     1261 gcgaacgccg ccgccaaacc gaagaactct ggcagtactt gcacctccgc ggccggaccc
     1321 tcttgcaacg ccgcggactc gcgagcgctg ccggcgagcg aggggatttt cgcgtcgcgg
     1381 ttggctcgtg agcgcacccc ttgcggccgc gccgggaagc tttgaaggcc gctcccgcgg
     1441 cgggccgccg ccgaggccga gattacgatc cgctcgagca gcggagccgc caactactcc
     1501 gttcccaccc cgtcgcaaaa cttgtcatcg agggagccgc ggccgtcgcc gttgtcgaga
     1561 aaacagacgc tggtccagca atagccgccg tagcattcgt cgtgatccgt gcagggctcg
     1621 ccgccgtgct tcatcggcgt gcagacgtcc gtctccgggc aatagttgcc catgctgcaa
     1681 tcgctgtcga aggtgcacgg cgctcccacg tcgccgcgcg ccacgcaggt cgagtagagg
     1741 tcgtcggtgc agtgggtctg cccattgcaa tacgacgagc cccccaggat gcactcgcag
     1801 ccaagcccaa gcgcgggctg gcacgtgccg gctgctggcg cgggcgtgga gccgctgggg
     1861 aacgggccgc caaacgagca gcggagtccg tcgtcatcgt gacacgtgac gacgacactc
     1921 gggtcgctcg gatcgttgat cgggtagcac gtgccgctat cggtgaggat ctcgcagctt
     1981 tggttgcaag cgtcgccgac cttgccgcgg atctgcacgg tgcactcgct cgtctgcaag
     2041 tcacagtcga cgaggccacg gggatcgggg gcacaatctg aatcgtggat gcagtacatg
     2101 ccgagcggca gcgtgccgcg gtaaacgcgc aaacaggcgc ctggcagccc gcggtagctg
     2161 gtcgggccgg ggcacctcgc ggcggaagcc ttgaggccgt cgaaacacag gcctgcctcg
     2221 tttgcgtcgt actttttgtc cgctttatcg agcgcggtcg gagcataggc gagacacttg
     2281 gcttcatcgt acgggggcgc cgcagtccca cagcacggct tcatggcggc gcacgccagc
     2341 gcgggccatt gcgcattgaa cgtcgcctcg tcgatactcg cgggcgctgg cggcttcacg
     2401 gcgatctgcg tcgtgtcgca cgagatggcg cccgtcttcc cgccggtgga cgatccaccg
     2461 gcgcccgatc tgcccgctcc gttgccggcg ccgcccgctg ccgatgcgcc gctcaccgcg
     2521 ccggtgcccg ccgtgctcgc gctcccgctc gcgccgacac cggccgatac tgacgagccc
     2581 gcgctgcccg ccgcaccgtt gccggctgag ctcgcagcac ccccgctggc tccggcaccg
     2641 ccggtcccga tctttgatgc gccggcctgg cccgatgcgc tggcatcgtt gtcatcgctc
     2701 ggcgcctggt tgcactgcac aagaaagagc ccgagtacgg tacagaaggc cgccgcacca
     2761 atcgtcacct gtcgttcacc catgcacgcg aggctgccac cgcgctgaga ccgcagaaat
     2821 actgcccaat cgcacttcag tgatgacgag cagtcatgaa ttccacgagg ctcgcgatga
     2881 gcgaggtgcc ggcgtggatg gaggggtaac gcttcttccg gcgctcaccc gccgctccgt
     2941 cgtgatacga ttgcctgcgt gcggtggatg gtgcttgctt cgcccctcgg ggcggcgctg
     3001 ctcgtgacag cgggcgcggc ggcgcagacg ttcgagttcg tgcctattgc cggcggggcg
     3061 gtgagcgatc tcgcgtacga tccgcacagc gcggggctcg tcttcgcggc cgtgcacgga
     3121 gtggggatct acaagtccac ggatggccag ccggggcggc agcgctgcgt ctggtgccgg
     3181 tcgcgccgga gcgagcgctg ggagaacctc ggctagcagc gaagaagata gcggcggctc
     3241 gaccaggaag aagacgtccg gttgcgcgtg ccacgtcggg cgctgcgaca gcagcgcggg
     3301 cggcgcgcta ctgctcgcgt tgctcgggct catgggcgct cgccggcgcg gctcgcaggc
//
LOCUS       DATIML010000409         4150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1239957, whole genome shotgun sequence.
ACCESSION   DATIML010000409 DATIML010000000
VERSION     DATIML010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4150
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1239957"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1440
                     /locus_tag="VLJ38_07090"
     CDS             190..1440
                     /locus_tag="VLJ38_07090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39313.1"
                     /translation="MTNSAGSSGGARTRRSQHWGSVLAALLCVLLSRHVLADEPGFHP
                     FSLDVHGFVSQGFMLSSSNNYLTNSRRGSFELTEVGINFTKTITDDLSVGMQLFMRDL
                     GPIGNYKPQFDWAYLDYHFRDWLGFRAGRTKLPFGLYNDQADIDAARVPVLLPQSVYP
                     TNERDFLLAQTGFELYGYERLPALGALDYRVYGGTIFIDQTTLASPAATVNKIDVPYV
                     VGGRLLWRAPTPLDGLTLGGSAQALRINIDYSLSAGALAALAQKYMLPANFNGRFKYE
                     LPAFLWVGSLEYAAHDILLAAEYSRWRLGRELRPEIVPDSDATQTRWYVMGSYRAASW
                     MSPGAYYSVLNSGVAGPLTRDKYQQDFAVTTRFDINQNWLVKLEGHYMRGTAALDSTL
                     NSNIALGELSRVWGVFMAKTTAYF"
     gene            1456..1947
                     /locus_tag="VLJ38_07095"
     CDS             1456..1947
                     /locus_tag="VLJ38_07095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39314.1"
                     /translation="MPKQRRVREASGRGAARLLRRTVLACFALALAAALPARAGDGAP
                     EFRVIAHPLRPESSVERSFVADVFLKNVTRWPNEEAARPVDQRLDAEVRRRFSEIVLR
                     RSVAAVKTYWQQRIFSGRGVPPPELESDQEVVAYVEAHPGAIGYISGAAPHGKTKVLT
                     VTP"
     gene            1976..>4150
                     /locus_tag="VLJ38_07100"
     CDS             1976..>4150
                     /locus_tag="VLJ38_07100"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39315.1"
                     /translation="MLLSLRSKLIAIVTLIIVALCALLLVSLGLGLRQAREIEDVERR
                     MVPKLELGPRLQADFEHLRQSMQEAVAAQDPTALDDSIRLRNAFIGTVTSAGAALTAA
                     DAAELRHAITAYHDSAYGVSRRMLRGETGEALTDAIAAMQAQQHATEALIQHSAQLDR
                     RELAQGFGAVRQSAAAGTRYALVIGLVTLVLVVVVTSRVGRGAVLQLAGISSGVARFA
                     TGDLEEPIPVTLEDELGKLARQTNQMAAALYRSAWLKQSLADLSDELRSELVYEEVAR
                     RALAFVCKRVGAVAGVLYVADQSGDLTPAASVAGDGAPLADVPSFRAGVGLVGRATLA
                     QELEVVEPPPGYFTVRSGLGASEPQRLVLLPLARAERSVGVLELALFEPFRDDARDFL
                     GAAREIIAVSLEVARAAAGLRTLLEQTQKQAELLAAQEEELRASNRELRDQQDELRRA
                     NDELELQRRELRAQNVELEGAREDLIQKATELARVSSYKSQFLANMSHELRTPLNSML
                     LLSHLLAENEAKNLSPKQVEHAHTIHAAGQDLLGLINQVLDLAKIEAGRQDVDVSEVS
                     LEDLAGHLHRLFSATAQEKGLTFRTELEPGLPASITTDRRRLERILVNLLGNALKFTD
                     RGEVALQIGRPTRPVDTAAGPLEPARAVAFAVSDTGIGIPRAAQARIFAPFEQADTRI
                     DRRYGGTGLGLAIARESAVLLGGELLLESREEHGSTFTCYLPE"
BASE COUNT          699 a         1435 c         1331 g          685 t
ORIGIN      
        1 tcgagaacac cagtgaggcg cttatccgcg atccgagact cgggggttag tcacctacac
       61 ttacccacgt catcgcgttc cctgcctcgt cggcaatagg ccagccaagt acgcattcaa
      121 tgattcgtac gaaagccgtg agctcggttg acagcttcgc tggcgcctca gtacgctcgc
      181 gccctgatag tgacgaatag cgcgggttcg tcgggcggcg cgcggacacg tcgttcgcag
      241 cactggggca gcgtcctcgc tgcgctcttg tgcgtgctgc tgtcgcggca cgtgctcgcg
      301 gacgaaccgg ggttccaccc cttttcgctg gatgtgcatg ggttcgtgag ccaaggcttc
      361 atgctgagct cgtcaaacaa ctacctgacg aactcgcgac gcggcagctt cgagctcacc
      421 gaagtgggca tcaacttcac gaagaccatc accgacgatc tgagcgtcgg catgcagctc
      481 ttcatgcggg atctcggccc gatcggcaac tacaagccgc aattcgactg ggcttatctc
      541 gattatcact ttcgggattg gctcggcttc cgcgcgggac gcaccaagct ccccttcggc
      601 ctctacaacg atcaggcgga catcgacgcg gcgcgcgtgc ccgtgctctt gccgcaatcg
      661 gtgtatccga ccaacgagcg cgactttttg ctcgcgcaga ccggcttcga gctctacggt
      721 tatgagcgac tgccggcgct cggcgccctc gactaccgcg tctacggcgg caccatcttc
      781 atcgatcaga cgacgcttgc gtcacctgcg gccacggtca acaaaatcga cgttccgtac
      841 gtggtcgggg ggcgcttgct ctggcgtgca ccgacgccgc tcgacggcct gacgctcggc
      901 ggcagcgcgc aggcgttgcg catcaatatc gattattcgc tgagcgccgg ggcgctcgcg
      961 gcgctcgcac aaaagtacat gctgccggcg aatttcaacg gcagattcaa gtacgagctg
     1021 ccggcgtttc tgtgggtcgg ctctctcgag tacgcggcgc acgacatctt gctcgccgcc
     1081 gaatacagcc gctggcggct cggccgcgag ctgcgaccgg aaatcgtgcc tgactcggat
     1141 gcgacgcaga cgcgctggta cgtgatgggg tcgtatcgcg ccgcttcctg gatgagcccc
     1201 ggcgcctact actccgtgct gaatagcggc gtggcagggc ccctcacgcg cgacaagtac
     1261 cagcaagatt tcgcggtcac gacacgcttc gacatcaacc agaactggct cgtcaagctc
     1321 gagggccact acatgcgggg caccgccgcg ctcgactcga cgctcaactc caacattgcg
     1381 ctcggcgaac tgagtcgcgt ctggggcgtc ttcatggcga agaccaccgc atacttctga
     1441 agggagcgcg ggagcatgcc gaagcagcga cgcgtccgcg aggcctccgg ccgcggcgcc
     1501 gcacggctcc ttcgccgcac cgtgctcgct tgtttcgcgc tcgcgctcgc ggccgctctg
     1561 cccgcgcgag ccggggatgg agcccccgag ttccgcgtga tcgcgcatcc actgcgccct
     1621 gaaagcagcg tcgaacgctc cttcgtcgcg gacgtgttcc tgaagaacgt cacgcgctgg
     1681 ccgaacgagg aagcggcgcg cccggtcgat cagcgcctcg acgcggaagt gcggcgcagg
     1741 ttctcggaaa ttgtcctccg ccgctcggtc gccgcggtga agacttactg gcaacaacgt
     1801 attttctccg gccgcggggt gccacccccg gagctcgagt cggatcagga ggtggtcgct
     1861 tacgtggaag ctcatcccgg cgcgatcggc tacatttccg gggcggctcc gcacggcaag
     1921 acgaaggtgt tgacggttac gccgtgaccc gaggtcacgc gcagaaacga gtcgattgct
     1981 cctctccctc cgcagtaagc taattgcgat cgtcacgctg atcatcgtgg cgctctgcgc
     2041 gctcttgctc gtctcgctcg gactcgggct gcgccaagcg cgcgagatcg aagacgtgga
     2101 gcggcgcatg gtgccgaagc tcgagctcgg ccctcgcttg caagccgact tcgagcacct
     2161 gcgccagagc atgcaagaag ccgttgccgc ccaggatccc accgcgctcg acgacagcat
     2221 tcgcctgcgc aacgccttca tcgggaccgt gacgtccgcc ggagcggcgc tcacggccgc
     2281 cgatgcggcc gagctccggc acgccatcac ggcctatcac gactccgcct acggcgtgtc
     2341 acgccgcatg ctgcgcggtg agacgggcga agcgctcacc gacgccatcg cggccatgca
     2401 ggcgcagcag cacgcgaccg aagcgctcat ccagcattcg gcgcagctcg accggcgtga
     2461 gctcgcgcag ggtttcggtg cggtgcggca gagcgcggcg gcaggcacgc gctacgcgct
     2521 cgtgatcggt ctcgtgacgc tcgtgctcgt cgtcgtcgtc acgagccgcg tcggacgcgg
     2581 cgcggtgctc cagctcgccg gcatttcgag cggagtggcg cgtttcgcga ccggcgatct
     2641 cgaagagccg atcccggtca cgctcgagga cgagctcggc aagctcgcgc gccaaacgaa
     2701 ccaaatggcg gcggcgcttt accggagcgc ctggctgaag caaagtctcg cggacctgtc
     2761 ggacgagctc cggagcgagc tcgtctacga agaggtcgcg cgccgggcgc tcgcgttcgt
     2821 ctgcaaacgc gtcggcgccg tcgccggggt cttgtacgtg gcagaccaga gcggcgacct
     2881 gacccctgcg gccagcgtcg cgggggacgg cgcgccgctc gccgacgtgc ccagctttcg
     2941 ggctggtgtc gggctcgtcg gtcgcgccac gctcgcgcaa gagctcgagg tcgtcgagcc
     3001 gccgcccggt tatttcacgg ttcgctcggg gctcggcgcg agcgagccgc agaggctcgt
     3061 gctcttgccg ctcgcgcgtg ccgagcgttc ggtcggcgtg ctcgagctcg cgctgttcga
     3121 gccgttccgg gacgacgcgc gggactttct gggcgctgcg cgcgaaatca tcgccgtctc
     3181 gctcgaagtc gcgcgcgccg cggcagggct ccgcacgcta ctcgagcaga cccagaaaca
     3241 ggccgagcta ctcgccgcgc aggaagaaga gctccgcgcc agcaaccgcg agctcagaga
     3301 tcaacaggac gagctccggc gcgccaacga cgagctcgag ctgcagcgtc gcgagctccg
     3361 cgcccagaac gtcgagctcg aaggagcgcg cgaggacctg atccaaaagg cgaccgagct
     3421 tgcgcgcgtg agcagctaca aatcgcagtt tctcgccaac atgtcgcacg agcttcgcac
     3481 cccgctcaac agcatgctcc tgctctcgca cctgctcgcc gagaacgaag ccaaaaacct
     3541 ctcgcccaag caagtggagc acgcgcacac catccacgcc gcgggacaag acctgctcgg
     3601 gctcatcaat caagtgctcg atctggccaa gatcgaagcg ggccgtcagg acgtcgacgt
     3661 gagcgaggtg tcgctcgagg acctcgccgg acacttgcac cgcctcttca gcgcgacggc
     3721 ccaagaaaaa gggctcacct ttcgcaccga gctcgaaccg ggactgcccg cgagcatcac
     3781 gaccgatcgc cgccggctcg agcgcatcct cgtgaacttg ctcggcaacg cgttgaaatt
     3841 caccgatcgc ggcgaggtcg ccttgcagat cgggcgaccc acgcgtcccg tcgacaccgc
     3901 ggcgggtccg ctcgagcccg ctcgagccgt cgccttcgcc gtgagcgata cgggtatcgg
     3961 tattccgcgc gccgcgcagg cgcgcatttt cgcgccgttc gaacaagccg acacacgcat
     4021 cgaccgccgc tacggcggca cggggctcgg gctcgcgatc gcccgcgagt cggcggtctt
     4081 gctcggcggc gagctcctgc tcgaaagccg cgaagagcac ggcagcacgt tcacctgcta
     4141 cttgcccgaa
//
LOCUS       DATIML010000410         2366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_83815, whole genome shotgun sequence.
ACCESSION   DATIML010000410 DATIML010000000
VERSION     DATIML010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83815"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VLJ38_07105"
     CDS             <1..346
                     /locus_tag="VLJ38_07105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39316.1"
                     /translation="GWYGAAVAASFMWPNGAWVSDVRIPIAGPWMAMRHFKCGPGEPN
                     CGTALVIVRGVLAGMDGIGQVGGLAIALESLFLPVRKSHQARSVHTQHAWVRPVPILS
                     GDTIGLGLVGAL"
     gene            507..2174
                     /locus_tag="VLJ38_07110"
     CDS             507..2174
                     /locus_tag="VLJ38_07110"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HSU39317.1"
                     /translation="MNRRTKFVLVTGGVVSSIGKGLTSASIGALMEARGLAVTHMKLD
                     PYINVDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFTSARLTRASNVTTGRIYEAVI
                     TKERRGEYLGATVQVIPHITDEIKARIREATDAADVAIIEVGGTVGDIESLPFLEAIR
                     QLKLEAGATNALSVHVTLVPHIASAGELKTKPTQHSVREMREIGIQPDILICRCDRPI
                     ARGLKEKIALFSNVPVESVISAVDVSCIYELPLVLHAEGLDAHIAERLNIWSRQPELA
                     AWHSTVERFKKPANGSVRIGVVGKYVHLKDSYKSLHEALVHGGLANDVAVQLEYIDSE
                     QIERGSAAGLLSGLDAVLVPGGFGDRGVEGKIQAIGYVREHAVPFFGICLGMQLAVVE
                     YARNVCGLKGAHTTEVQKDAPYPVIDLMPDQRGVKDKGGTMRLGAYPCVLAAGTRAAE
                     LYGQERISERHRHRLEVNNDYRETLTRAGLRLSGTSPDDRLVEIVELEGHPFFVGCQF
                     HPEFKSRPMSAHPLFSGFVAAAVRRRDDIARSARDEAQATETRSSVN"
BASE COUNT          407 a          845 c          744 g          370 t
ORIGIN      
        1 gggctggtac ggcgcggccg tcgccgcctc cttcatgtgg ccgaacggcg cgtgggtttc
       61 cgatgtccgc attccgatcg cggggccctg gatggcgatg cggcacttca agtgcggccc
      121 cggcgagcca aactgtggaa cggcgctcgt gatcgtgcgc ggcgttctcg ccggaatgga
      181 cggcatcggc caggtaggcg gactcgcgat cgcgctcgag tcgctcttct tacccgtgcg
      241 gaagtcgcat caggcgcgga gcgtccacac gcagcacgcg tgggtgaggc ccgtacccat
      301 cctcagcggc gatacgatcg ggctcggcct ggtcggcgca ctttgaaaca cgtcgcgacg
      361 cgacgtgtct ctgcgcgccg cgagcgcgcc gcgcgtacga catgcacgcg taggtgtccg
      421 aattttctcg ggcatcacac gacgcgcgaa cttttgagtg cacgaagcga gaaggcgtgg
      481 taccaaactt ctccgagatg ccaccggtga atcgacgaac caagttcgtc ctcgtcaccg
      541 gcggagtagt ctcctcaatc gggaagggcc tcacctccgc gtcgatcggc gcgttgatgg
      601 aagcgcgcgg cttggccgtg acgcacatga agctcgaccc gtacatcaac gtcgatcccg
      661 gcacgatgtc gccgtaccag cacggcgagg tgtacgtcac cgacgacggc gccgagaccg
      721 acctcgatct cggccattac gagcgcttta cctcggcgcg gctcacgcgc gcctccaacg
      781 tcacgaccgg ccgcatttac gaggctgtca tcacgaaaga gcggcgcggc gaatacctcg
      841 gcgcgaccgt gcaggtgatc cctcacatca ccgacgagat caaagcgcgc attcgcgagg
      901 ccaccgatgc cgccgacgtc gcgatcatcg aggtcggcgg caccgtcggg gacatcgagt
      961 cgctcccctt tctcgaagcg atccgccagc tcaagctcga agccggcgcg acgaacgcgc
     1021 tcagcgtgca cgtgacgctc gtgccgcaca tcgcttccgc cggtgagctc aagaccaagc
     1081 cgacccagca ctccgtgcgc gagatgcgcg agatcggcat ccaacccgac atcctgatct
     1141 gccgctgcga tcgccccatc gcgcgcggcc tcaaggaaaa gatcgcgctc ttctcgaacg
     1201 tccccgtgga gagcgtcatc tccgccgtcg acgtttcatg catctacgag ctgcccctcg
     1261 tgctccacgc cgaaggcctc gacgcccaca tcgccgagcg gctcaatatc tggtcgcgcc
     1321 agccggagct tgcggcttgg cacagcacgg tggaacgctt caaaaagccc gccaacggca
     1381 gcgtccgcat cggcgtcgtc ggcaagtacg tgcacctgaa ggacagctac aaatccctgc
     1441 acgaagcgct cgtccacggc ggtctcgcca acgacgtcgc cgtccagctc gagtacatcg
     1501 actccgagca aatcgagcgc ggcagcgccg ccgggctctt gagcggcctc gacgccgtgc
     1561 tcgtgccggg cggcttcggt gaccgcggcg tcgagggcaa gatccaagcg atcggctacg
     1621 tgcgcgaaca tgccgttccc ttcttcggca tctgcctcgg catgcagctc gccgtcgtcg
     1681 agtacgcgcg caacgtctgc gggctgaagg gcgcccacac gacggaagtc cagaaagacg
     1741 cgccgtaccc cgtcatcgat ctcatgcccg atcagcgggg cgtcaaggac aagggcggca
     1801 cgatgcgtct cggcgcgtac ccgtgcgtgc tcgccgcggg cacgcgcgcc gcggaactct
     1861 acggccaaga gcgcatctcc gagcggcacc gccaccggct cgaggtcaac aacgactacc
     1921 gggagacgct cacgcgcgcc ggcctgcggc tgagcggcac gagccccgac gatcgcctcg
     1981 tcgagatcgt cgagctcgaa gggcacccgt tcttcgtcgg ctgtcagttc caccccgagt
     2041 tcaagagccg gcccatgtcg gcccacccgc tgttttcggg cttcgtggcc gccgccgtgc
     2101 ggcgccgaga cgacatcgcg cggagcgccc gcgacgaagc ccaggcgacc gagacgcgca
     2161 gcagcgtcaa ctgacgctgc cccgccaaaa ctggcgggct ccgaaccccc cgcgtattct
     2221 tcgcggcgtg cgtcactccg ccctctgcct gctcgggctc gttccgctcg ttttcgcgac
     2281 ggcctgcgcc tcgagcggcg ccgtgaacgc cgcgttgaag tccgatctcg ggaccttgcg
     2341 ccagagcatc cgtgacgaac agcgca
//
LOCUS       DATIML010000411         3826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4705916, whole genome shotgun sequence.
ACCESSION   DATIML010000411 DATIML010000000
VERSION     DATIML010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3826
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4705916"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..870)
                     /locus_tag="VLJ38_07115"
     CDS             complement(<1..870)
                     /locus_tag="VLJ38_07115"
                     /EC_number="2.4.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decaprenyl-phosphate phosphoribosyltransferase"
                     /protein_id="HSU39318.1"
                     /translation="MIRTVRPHQWVKNVFVLAPIVFAKEMFSPFVVTRAASAFAVFCL
                     LAGAVYAMNDIADRDADRVHPVKRKRPIASGLVPLSWAYALSAVLVLVALGWSLSLGL
                     AFAAVALVYFGQNVWYSFQLKHVAYLDVSCIAAGFVLRVMGGGYATHIQISNYLLACT
                     ALLALFLGFGKRRHELASAEVNAAAAQRASLEAYTRQGLDVALVITALATVGAYVAYT
                     LDSHTREFFHSDRLWMSTGFVVLAMLRYLHIVRNRPLAESPTQEILSDGLFVGIVLGW
                     VVLVFWLVYNLRPS"
     gene            860..1045
                     /locus_tag="VLJ38_07120"
     CDS             860..1045
                     /locus_tag="VLJ38_07120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39319.1"
                     /translation="MRITPRSRSIVPDLPGDGALGPALCTGRLKKEETLVAGSLVGEE
                     ILRGALGAAGSDPVSSG"
     gene            1048..3063
                     /gene="ligA"
                     /locus_tag="VLJ38_07125"
     CDS             1048..3063
                     /gene="ligA"
                     /locus_tag="VLJ38_07125"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HSU39320.1"
                     /translation="MPNVSPKIRHDELVRAVKTHDHRYHVLDDPTISDREYDALYAEL
                     RALEAAHPELVTPDSPTQRVGAAPRSELRTVAHVVPMTSLDNTYDADDLGEFVRRVKD
                     GLPASADPVFCVEPKLDGASIEILYRNGRLEGGSTRGDGLTGEDVTLNLRTLRSLPLT
                     LDYQGPLTLRAEVVIYRRDLERINRERAALGESLFANPRNAASGALRMLDPRVVASRG
                     LRAVVWQVIEGEALAKTHSGALARLAELGLPTARKERICRNLEELLEAVQGLDAARRD
                     FPYETDGAVIKVDEFSQQAILGATAKFPRWAIAYKFGAERATTRVLDIEVGVGRTGVL
                     TPVAILEPVQLAGTVVSRASLHNEQIVGQLDVRIGDEVSIEKAGEIIPQVVSVAHAAR
                     QGQERTFSMPTHCPSCGTAVERVPGEVAVRCPNPECPEQVKGAIFHFSRRFALDIDRL
                     GEALIEQLVAKKTVHDVADLYVLNAETLEGLERMGKKSAENVLASIARSKEQTFDRLL
                     TGLGLEHVGQVAARQLAEAAGSLETLLGWDDEAVVAHVSAIAGFGPKLVESVRSYLAD
                     PVKRRLLERLRELGVSRPQPRAVLTEGPLSGSSFCVTGVLSRRREDVHADIRARGGEV
                     HDKIKQGTTYLVIGEKVGKAKLDAAKKFGTKILTEAELATLLEGNAG"
     gene            3060..>3826
                     /locus_tag="VLJ38_07130"
     CDS             3060..>3826
                     /locus_tag="VLJ38_07130"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSU39321.1"
                     /translation="MTRRQAVQATLGIVAAVVSIVLTVAFALGDREGPARCPEGLTAS
                     GARCCGDGQRASGGRCVGRALACAATQSLTPDGCVAPPKRVAYAGGKALLGSPDWEGH
                     GAREQVGAYVAPYELDAFEVTLARYQACVGAHACDPVPVAGEPGEPVRSVTPEQAETF
                     CRFVGGRLPLGAEWVLAAMGQEARRFAWGSTGIVCRRAAYGMVQGPCADGGTGPDLAG
                     SRPDGATPDGAFDLSGNVAEWTHEADGYVARGGSFRS"
BASE COUNT          657 a         1266 c         1348 g          555 t
ORIGIN      
        1 gctcggcctc agattgtaga ccagccaaaa aaccagcacg acccagccga gcacgatgcc
       61 gacgaacagg ccgtcgctca ggatttcttg ggtcgggctc tcggcaagcg ggcggttacg
      121 cacgatgtgg aggtaacgca gcatcgcgag cacgacgaac ccggtgctca tccacaagcg
      181 gtcgctgtgg aaaaattctc gtgtgtgtga gtcgagcgtg tacgcgacgt acgcgccgac
      241 ggtcgcgagc gccgtgatga cgagcgcgac gtcgaggccc tggcgcgtgt acgcctcgag
      301 cgaggcgcgc tgcgccgcag cggcgttcac ctccgccgag gcgagctcgt gccggcgctt
      361 gccgaagccc aagaacagcg cgagcagcgc cgtgcaggcg agcaggtagt tcgaaatctg
      421 gatgtgcgtc gcgtagccgc cacccatgac gcggagcacg aaaccagccg caatgcagct
      481 cacgtcgagg tacgcgacgt gcttcaactg gaacgagtac cagacgtttt gaccgaagta
      541 gacgagcgct acggccgcga aagctaggcc gaggctcaac gaccagccga gcgcaacgag
      601 gacgagcacc gccgaaagcg cgtaggccca cgagagcggc acgaggcccg acgcgatggg
      661 tcgcttgcgc ttcaccgggt gcacgcgatc ggcgtcgcga tcggcgatgt cgttcatcgc
      721 gtagaccgcg ccggcgagca ggcagaacac ggcgaaggcg gaggccgcgc gcgtcacgac
      781 gaacggcgag aacatctcct tcgcgaagac gatcggggcg agcacgaaca cgttcttgac
      841 ccactggtgg gggcgaaccg tgcggatcac gccgcgaagt cggtcgatcg tacctgattt
      901 accgggcgac ggagcgctcg ggccggcgct ttgcacgggt aggctcaaga aggaggagac
      961 gctagtcgcg ggctcgctcg tgggcgagga aattttgcgc ggagcgctcg gcgccgcggg
     1021 ctcggatccc gtaagctccg gctgaccgtg ccgaacgtta gtccgaagat tcgacatgac
     1081 gagctcgtgc gcgccgtaaa aacgcacgac caccgctacc acgtactcga cgatccgacg
     1141 atctccgatc gcgaatacga cgcactttat gccgagcttc gcgccctcga agccgcgcat
     1201 cccgagctcg tcacgccgga ttcaccgacg cagcgcgtgg gggcggcgcc gcgtagcgag
     1261 ctccgaacgg tggcgcacgt cgtgcccatg acctcgctcg acaataccta cgacgccgac
     1321 gacctcggcg agttcgtgcg ccgcgtgaaa gacggcctgc cggcgagcgc cgaccccgtt
     1381 ttctgcgtgg aaccgaagct cgacggcgcg agcatcgaga tcctgtatcg gaacggacgg
     1441 ctcgagggtg gctccacgcg cggcgacggg ctgacgggcg aagacgtgac gctcaacctg
     1501 cgcacgctgc gctcgttgcc gctcacgctc gattatcagg ggccgctcac gctgcgcgcc
     1561 gaagtcgtca tctatcgtcg tgatctcgag cgcatcaatc gtgaacgcgc ggcgctcggt
     1621 gagtcgctgt tcgccaaccc gcgcaacgca gcttccgggg cgctgcgcat gctcgatcca
     1681 cgcgtggtcg cgagccgggg actgcgcgcg gtcgtctggc aggtgatcga gggcgaggcg
     1741 ctcgcaaaga cgcactcggg cgccctcgct cggctcgccg agctcggcct gccgacggcc
     1801 agaaaggagc gcatttgccg gaatctcgaa gagttgttgg aagccgtgca aggcctcgac
     1861 gcggcacgcc gcgattttcc gtacgagacg gacggcgccg tgatcaaggt ggacgagttt
     1921 tcgcagcagg cgatcctcgg cgcgacggcg aagtttccgc gctgggccat cgcctacaag
     1981 ttcggcgccg agcgcgcgac gacgcgcgtg ctcgacatcg aggtgggcgt cgggcgcacg
     2041 ggcgtgctca cgccggtcgc gatcttggag ccggtgcagc tcgcgggcac ggtggtttca
     2101 cgcgcgtctc ttcacaacga gcaaatcgtc ggccagctcg acgtgcgcat cggtgacgaa
     2161 gtttccatcg aaaaagcggg cgaaatcatc ccgcaggtcg tgagcgtcgc gcacgcagcg
     2221 cgccagggtc aggaacggac cttcagtatg ccgacgcact gcccgagctg cggcacggcc
     2281 gtcgagcgcg tgccgggcga agtcgcggtg cgctgcccga accccgaatg tcccgaacag
     2341 gtgaagggcg caatcttcca cttttcgcgg cgcttcgcgc tggacatcga ccggctcggt
     2401 gaggcgctga tcgagcagct cgtcgcgaaa aaaaccgtgc acgacgtggc tgacctctac
     2461 gtcttgaacg ccgaaacgct cgagggcctc gagcgcatgg gcaagaagag cgccgaaaac
     2521 gtgctcgctt cgatcgcgcg ctcgaaagag caaacgttcg accggctgct cacgggcctc
     2581 ggcctcgagc acgtcggcca agtcgcggcg cgccagctcg ccgaagccgc cgggtcgctg
     2641 gagacgctgc tcggctggga cgacgaggcg gtcgtggcgc acgtttccgc catcgccggc
     2701 ttcggtccga agctcgtgga aagcgtgcgc tcgtatctgg ccgatcccgt gaagcgccgg
     2761 ttgctcgagc gcctgcgcga gctcggcgta tcgcgcccgc aaccgcgcgc cgtgctcacc
     2821 gaggggccgc tcagcggcag ctcgttctgc gtgacgggcg tgctttcgcg ccggcgcgag
     2881 gacgtgcacg ccgacatccg cgcgcgcggc ggcgaagtgc acgacaagat caagcagggc
     2941 acgacttacc tcgtcatcgg cgagaaagtc ggcaaagcca agctcgacgc cgcgaagaag
     3001 ttcggcacca aaatcctcac ggaagccgag ctcgcgacgc tgctcgaggg caacgcgggg
     3061 tgacacgtcg tcaagccgtt caggccacgc ttggcatcgt cgcggccgtc gtgagcatcg
     3121 tgctcaccgt cgccttcgcg ctcggggacc gcgagggtcc ggcgcgctgc cccgaggggc
     3181 tcaccgcgtc cggcgcgcgc tgttgcggtg acggccagcg agcgagcggc ggacgctgcg
     3241 tcggacgcgc gctcgcctgc gccgcgacgc agagcctcac gcctgacggc tgcgtcgccc
     3301 cgccgaagcg cgttgcgtac gcgggaggca aagcgctgct cggttcgccg gactgggaag
     3361 gacacggagc gcgcgagcaa gtgggcgcct acgtcgcgcc gtacgagctc gacgccttcg
     3421 aagtgacgct cgctcgctat caagcctgcg tgggcgcgca cgcgtgcgac ccagtacccg
     3481 tcgcgggcga acccggtgaa ccggtgcgct cggtgacgcc cgaacaagcc gaaacctttt
     3541 gtcgcttcgt gggcggccgg ctgccgctcg gagccgagtg ggtgctcgcc gcgatggggc
     3601 aggaggcgcg gcgctttgcc tggggttcga ccggaatcgt gtgccggcgc gccgcttacg
     3661 gcatggtgca gggcccttgc gccgacggcg gcacggggcc cgatctggcg gggtcccgcc
     3721 ccgacggcgc gacgccggac ggggcgttcg atctgtcggg caacgtcgcc gagtggacgc
     3781 acgaggccga cggctacgtc gcccgcggcg gctcgttccg ttcgag
//
LOCUS       DATIML010000412         1786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5282727, whole genome shotgun sequence.
ACCESSION   DATIML010000412 DATIML010000000
VERSION     DATIML010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5282727"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1069)
                     /locus_tag="VLJ38_07135"
     CDS             complement(<1..1069)
                     /locus_tag="VLJ38_07135"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39322.1"
                     /translation="MFPQIFGKYVLEREIAAGGMARVFLATLRGAVGFEKRLVVKQIR
                     TELAVDEAFVRRFVEEAKTAVELSHPNIVPVYELGVEQGVYYIAMEHCSGVTLSEVLA
                     RTGPLDPEEGAYVGAEVCRALDYAHRRAGIIHRDVTPRNVLLDDEGAVRLIDFGIAAP
                     AEASGGRREVFGSPGHMSPEQLRGDVLGPPADVFAVGALLIEAWTGRPPFRRATAHES
                     ALALRQTPPSLEHTSPALAPLAELVRASVALAAEERPADAERLGRGLRDFLRSADNVE
                     VSRRLAARVEHARSAEPSSGIPAVSASADSTPPLVTPATPAPTTATFAAREEIVEWTR
                     KLSSIPPPLPPVDGTRRLSTAP"
     gene            1104..>1786
                     /locus_tag="VLJ38_07140"
     CDS             1104..>1786
                     /locus_tag="VLJ38_07140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39323.1"
                     /translation="MLSGAACSEPSAPVTTVSVTAHELAGCKIPDRGPTDPSPFRLTL
                     TALGPFPASGSDVERDLGLHAGGHALSFNSATIGVDAVATNTAGATEGAFIGHSERRL
                     DHGIDVSLWPEQTACEVVSADGGYPGSGGGQALGFSTRSGISLVAGENADDQRAGSTI
                     VFATDTGDARVVPRDLGTLRVSRAFATVTEFGDGLLVAGGTNPAATAATEDAAGTAEV
                     FDPVTGGFDP"
BASE COUNT          262 a          611 c          646 g          267 t
ORIGIN      
        1 gcggcgcggt cgagagccgg cgcgtgccgt ccacgggcgg cagcggcggc ggaatgctgc
       61 tgagcttgcg cgtccactcg acgatctctt cgcgcgccgc gaacgtcgcc gtggttggcg
      121 ccggagttgc gggcgtgacg agcggcggcg tcgagtcggc ggacgcgctc acggccggta
      181 tgccgctcga cggctccgcg gaacgcgcgt gctcgacccg tgccgcgaga cggcgcgaca
      241 cctcgacgtt atcggcggag cgcaaaaaat cgcgcaaacc gcggcccaag cgctcggcgt
      301 cagcgggccg ctcctcggcg gcgagggcaa cgctcgcgcg cacgagctcg gcgaggggcg
      361 cgagcgccgg cgacgtgtgc tcgagggagg gcggcgtttg gcgcagagcg agcgcgctct
      421 cgtgcgcggt agcgcgccga aatggcggcc tgcccgtcca cgcttcaatc aagagcgcgc
      481 ccacggcgaa gacgtcggca ggcggtccga gcacgtcgcc gcgcagttgt tcgggcgaca
      541 tgtggccggg ggatccgaac acttcgcgcc ggccgccgct cgcttccgct ggcgcggcga
      601 tgccgaaatc gatgagccgc acggcgcctt cgtcgtcgag cagcacgttt cgcggcgtca
      661 cgtcgcggtg gatgataccg gcgcgccggt gcgcatagtc gagcgctcgg cacacttccg
      721 cgccaacata cgcgccttct tccggatcga gcggcccggt gcgcgcgagc acttcggaca
      781 gcgtcacgcc cgagcagtgc tccatggcga tgtagtagac gccctgctcg acgccgagct
      841 cgtagacggg cacgatgttc gggtggctga gctcgacggc cgttttcgcc tcttcgacga
      901 agcgacggac gaacgcttcg tcgacggcga gctcggtgcg gatctgtttg acgacgaggc
      961 gcttctcgaa tccgacggca ccgcgtaacg tggcgaggaa gacgcgcgcc atgccccctg
     1021 ccgcgatctc gcgttcgagc acgtatttcc cgaaaatctg cgggaacatc ggagctcgct
     1081 atcctagcgc gttcctctgc gtcgtgctga gcggcgcggc gtgttcggag ccgagcgctc
     1141 ccgtcacgac ggtgagcgtg acggcgcacg agctagcggg ctgcaaaatc ccggatcgcg
     1201 gtccgaccga tccttcgccg ttccggctca cgctgactgc gctcggcccg tttccggcga
     1261 gcggctcgga cgtggaacgc gacctcgggc ttcacgccgg cgggcacgcg ttgagcttca
     1321 attcggccac gatcggcgtc gatgccgtcg cgaccaacac cgcgggcgca accgagggcg
     1381 cgttcatcgg ccactcggag cgccgactcg accacggcat cgacgtttcg ctctggcctg
     1441 agcaaacggc ctgtgaggtc gtgtcggcag acggcggcta tccaggtagc ggagggggcc
     1501 aggcgctcgg gttctcgacg cgcagcggca tctcgctcgt cgcgggcgag aacgccgacg
     1561 atcaacgtgc gggcagcacc atcgtattcg cgaccgacac gggcgacgcg cgcgtggtgc
     1621 cgcgcgacct tggcacgctg cgtgtctcgc gcgctttcgc aaccgtcacg gagttcggcg
     1681 acggactgct cgtcgccggc ggcacgaatc ccgcggcgac ggcggcgacg gaagacgccg
     1741 cgggcacggc agaagtcttc gatcctgtga ccggcggctt cgaccc
//
LOCUS       DATIML010000413         3498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1817455, whole genome shotgun sequence.
ACCESSION   DATIML010000413 DATIML010000000
VERSION     DATIML010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1817455"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VLJ38_07145"
     CDS             complement(<1..312)
                     /locus_tag="VLJ38_07145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39324.1"
                     /translation="MGATATEGDTAIEGDATAGLARGADAAGADAAAGSLLAGAGAVP
                     SSVGRRAAGTASGVCVADAAGAEAGAAGAGATAFASVTAMTGAFVMFTIGELTTAGED
                     AG"
     gene            284..1051
                     /locus_tag="VLJ38_07150"
     CDS             284..1051
                     /locus_tag="VLJ38_07150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39325.1"
                     /translation="MSPSVAVAPIVTPRSAEPDAELVIDVEVSPASEDHSAPAVEVDA
                     PPDSKPSGIGQKYVPKEDGAPAVMLGPEVEAAESGQSARLEAEHRARRAPTMVRMQAF
                     DLPPPVAQPAQPELEFPTPRRSRAGIIIAAGAALLIGVAVLALTVASSAPDKSHPQPD
                     ATAALAVTPDTKAPVPPAVPPTTAATAPDKAEPRASATAAPLVTPKLASPAQKPITNR
                     SSPQAKAVASPKAPAPKSASGGTKPGAKSMIVRENPF"
     gene            complement(2175..>3498)
                     /locus_tag="VLJ38_07155"
     CDS             complement(2175..>3498)
                     /locus_tag="VLJ38_07155"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU39326.1"
                     /translation="VELGTADETRTLELSEGRPVVLGTGRAADVRLTDRCVSSQHCSL
                     VVADGGVRVEDLGSTNGVHVAGARLASALLTDDGSSFVIGRTSVTLRQEADAGPSAVP
                     RIPGLVGSSLPMRRVAEEIARHARSRQSVLLQGESGTGKDVVARALHTLSGRSGEYVP
                     LNVGAVPDSLADAELFGHRRGAYTGAVTSRAGAFESAHRGTLFLDEVAELSASAQVKL
                     LRVVEDGSVRPIGGSHAVAVDVRIVSASWALLESRVAEGRFRVDLFHRLSTVTITLPP
                     LRRRKSDIPVLCRVLLERLAPDVGEKRVTGPALARLVEHGWPGNVRELSAVLYRAAMA
                     APGSDIHASHVLLPEPQANENRVARASPADAETLLTEHGGNVSRAAKAAGVPRSTFRS
                     WLGRVRIAPQNRPETLTPPLCEPNHGSTAMPGLARALPVSLSRSAVTK"
BASE COUNT          583 a         1296 c         1162 g          457 t
ORIGIN      
        1 accagcgtcc tcgcctgccg tagtcagctc gccgatcgtg aacatcacga aggcgccggt
       61 catcgcggtg accgacgcga aggccgtcgc tcccgcgcca gcggcacccg cctccgcgcc
      121 agctgcatcg gcgacacaaa cgccgctcgc cgtgccggct gcgcgccgcc ccacgctgct
      181 cggcaccgca ccggcaccag caagcagcga ccccgcagcc gcgtcggcgc ccgctgcgtc
      241 cgctcccctg gctagtccgg ctgttgcgtc gccttcgatc gcggtgtcgc cttcggtcgc
      301 ggtcgctccc atcgtcacac cgcgatcagc agagccggac gccgagctcg tgatcgacgt
      361 cgaggtttcg cccgcaagcg aggaccactc ggcaccggcg gtcgaggtcg acgcgccgcc
      421 cgactcgaaa ccgagcggca tcgggcagaa gtacgttccc aaagaggacg gcgcgcccgc
      481 ggtgatgctc ggaccggaag tggaagccgc agagtcggga cagagcgctc gactcgaagc
      541 cgaacatcgc gcgcgtcgcg ccccgaccat ggtgcgcatg caagcgttcg acttaccgcc
      601 gccggtcgcg caaccggcgc agcccgagct cgagttcccg accccgcgcc gtagtcgcgc
      661 cggcatcatc atcgccgcag gcgcggcctt gctcatcggc gtggccgtgc tcgcgctcac
      721 cgttgcaagc tcggcgccgg acaagtcgca cccgcagcca gacgcaaccg cggcccttgc
      781 tgtcaccccc gacaccaaag ctcccgttcc gccggccgtc cccccgacga ctgctgctac
      841 cgctccggac aaggcagaac cgcgagcaag cgcaacggca gcacctctgg tgacgcccaa
      901 gcttgcgagc ccggcccaaa agccaatcac gaaccgatca tcgccccagg ccaaagccgt
      961 cgcttccccg aaggcaccgg ccccgaagtc ggcgagcggc ggaacgaagc ccggcgccaa
     1021 aagcatgatc gtgcgagaaa atccattttg atgcgtggct ccgcactgcg gcgacacgcg
     1081 ctttcgcccc tagcggagca ccgcccgggt cgcctactgt cgaaattgtt gattcggacc
     1141 gcccccatgc agaagaccct ggccgccggg cttttgatcg tgctcgtttg cagcggccga
     1201 gccgcgcgtg ccgacgatga caccacgacg accgcggccg ctcgcgagcg gttcaaggaa
     1261 ggcgtcagct acttcgacca gaagcagtac gagaaggcgc gcgccgcgtt cctgcaagcg
     1321 tatgcgctca aaaagcacca cgcggtgctc ttgaatctcg cgcagagcga gctccgctcg
     1381 agccacgagc gcgacgccgc gcagcacttc gcggagtacc tgcgcgaagc gaccgaggca
     1441 tccggtcccg aacgcgatgc cgcacagtcc ggcctcgcga gcgccaaagc ctcgattgcc
     1501 gaaatcacgg tgacgacgga cgcggacgcc gatgtgagcg tcgacgggac gcttcagggc
     1561 ctggcgccgc tccctggacc cctgtacctg gaaccaggga tgcacaccct gcaggcgaaa
     1621 aagggcgagc gcgtcgggac ccagagcctc agcgccaagg cgggcgaatc gcgcgaaatc
     1681 cgcctaaagc ttgcggcaga cggcgcggcc gtcgcggcgg cgaagccggc gacctcccct
     1741 gcctcagccc ccgaaaatca aaacgcgacg gagcccgcga gcaacgagac gccagcggcg
     1801 cacggcgagc acggccgcga gtcgttcttt cactggctgt tcacgaaacc cgcgggcgtg
     1861 atctccggca gtgccacgct cctgcttacc ggcggggcgg taggcttcgc gattgcctcg
     1921 agcgcgagct actcgaacgc cgacgatatt gcgcagaaga tcaacactcg cgcgcaacag
     1981 gacggcgtcc cgacgcgcgg catctgcgtc gatcccaaca cggtgctcgg ccccggctac
     2041 gacgccgaag ccgcgcgctt catggacgcc tgccaagctc gccaagacgc cgtgaacaag
     2101 ggcgactctt tcaagacggt cgcgaccgtc gcgggcgtcg gcgcgggtgt aatggcggtc
     2161 acgacgggcg tgctctactt cgtcacggcc gaccgcgaca gcgagacggg cagcgcgcgt
     2221 gcgaggccgg gcatcgccgt gctgccgtgg ttcggctcgc agagcggcgg cgtcagcgtc
     2281 tctggtcgat tctgaggcgc gatccgcacg cgtcctagcc acgaccgaaa cgtactgcgc
     2341 ggcacgccgg ccgctttcgc cgcgcggctc acgttgccgc cgtgctcggt gagcaaggtc
     2401 tcggcgtcgg cgggcgacgc gcgcgctacc ctgttctcgt tggcttgagg ctcgggcaag
     2461 aggacgtgcg acgcgtgaat gtcgctgccc ggcgccgcca tcgccgcccg atagagcacc
     2521 gccgagagct cgcgcacgtt acccggccag ccgtgctcga ccaggcgtgc gagcgcgggc
     2581 cccgtgacgc gcttttcacc cacgtccggc gcgaggcgct cgagcaacac gcggcagagc
     2641 accgggatat cgctcttgcg gcggcgcagc ggcggcagcg tgatcgtgac ggtcgacagg
     2701 cggtgaaaga gatcgacccg aaagcgcccc tcggcgacgc gcgactcgag cagcgcccaa
     2761 ctcgccgaca cgatgcggac gtcgacggca accgcgtgcg acccgccgat ggggcgcacc
     2821 gagccgtcct ccaccacacg caggagcttc acctgcgcgg aggccgacag ctcggcgacc
     2881 tcgtcgagga acagcgtgcc ccgatgagcc gattcgaacg cgccggcgcg actcgtgact
     2941 gcacccgtgt acgcgccgcg tcgatggccg aagagctcgg cgtcggcgag cgagtcgggc
     3001 acggcgccga cattgagcgg gacgtactcc ccgctccgcc cgctcagcgt gtggagcgcg
     3061 cgcgcgacca cgtctttgcc cgtgcccgat tcgccttgca ggagcacgct ctgtcgcgag
     3121 cgcgcgtgcc gcgcgatctc ttcggccacg cggcgcatcg gcagcgagga tccgacgagc
     3181 ccgggaattc gcggcacggc gctcggtccg gcgtcggcct cttgccgcag cgtgacgctc
     3241 gtgcgtccaa tcacgaagct cgagccgtcg tcggtgagca gggccgacgc gaggcgcgcc
     3301 ccggccacgt ggacgccgtt ggtcgaaccg aggtcctcga cccgcacgcc gccgtcggcc
     3361 acgacgagcg agcagtgctg ggagctcacg cagcggtcgg tgagccgcac gtcggcggct
     3421 cgcccggtcc cgagcacgac cggccgcccc tccgagagct cgagcgtccg cgtttcatcg
     3481 gcggttccga gctcgacg
//
LOCUS       DATIML010000414         2696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2970888, whole genome shotgun sequence.
ACCESSION   DATIML010000414 DATIML010000000
VERSION     DATIML010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2970888"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..928
                     /locus_tag="VLJ38_07160"
     CDS             <1..928
                     /locus_tag="VLJ38_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HSU39327.1"
                     /translation="RALEIAAAGSHNLLFIGPPGSGKTLLARALPGILPPLEFEEAVE
                     ATSIHSVAGLLQPEQGIVNERPFRAPHHSVSEAGLVGGGDVPRPGEVSLAHHGVLFLD
                     ELAEFRRSALEALRQPLEDGVVCIARARARAWFPARPLLVGAVNPCPCGYFSHPRRRC
                     TCSEDTRQRYRARLSGPLVDRLDIHVPVPPVEVSALTAPRHGESSEAVRTRVNRARDV
                     QRERARALGFTGRVNSALSGRELERAAPLDRTSQRLLEVAADKLGLSARAFVKVLRVA
                     RTIADLEGEDRVRQPHVAEAIQGRLLDREVVR"
     gene            1053..1394
                     /locus_tag="VLJ38_07165"
     CDS             1053..1394
                     /locus_tag="VLJ38_07165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39328.1"
                     /translation="MGENSSAPRTACPHCKQRAGVRFWYLLPSSNSRRVLTCVHCGGH
                     YDLADGSKMASIFGALLGLGPGVYLLGKIVQFGHNATPYKILGTVACFSLFVVLSMVA
                     GALTLRLVAKP"
     gene            1590..>2696
                     /locus_tag="VLJ38_07170"
     CDS             1590..>2696
                     /locus_tag="VLJ38_07170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39329.1"
                     /translation="MTTCLGGCAGAAEPETEAGSVSQAQDAEHGDQCDCELPESEGAN
                     KSKNLAIYGDAPYGTTPTDTAEFLASPAFIAAVNADPAVSLVVHVGDIHSGKQYCTEA
                     YDRSIYDLWKGFSDPLVYTPGDNEWSDCHKVAEGGGAYNQTTGNIDFVLGADGQPVDY
                     AGGDPVANLALVRSIFFAQPGATLGGRKRVLSQASCASSARPSDLNFVENVMWKDSSV
                     LFVTINLPGGSNNDNDVWYGAPAASVAQTNEVAERTAADLAWLDRAFTVASHGKVAGM
                     VIVAQADMWDPEKGAAHQTAYEPFLQHIAAHALAFGKPVLMLNGDSHVYQSSNPFAAG
                     DPASAIHPGYDVPNFHRIVVHGSTVPLEYLRLTVN"
BASE COUNT          436 a          936 c          863 g          461 t
ORIGIN      
        1 gcgcgcgctc gaaatcgccg cggcgggcag tcacaatctc ttgttcatcg gaccgcccgg
       61 cagcggcaaa acgttgctcg cccgcgcgct acccggtatt ttaccgccgc tcgagttcga
      121 ggaagcggtc gaggcgacct cgattcatag cgtggcgggc ctcttgcaac ccgaacaggg
      181 catcgtcaac gagcgcccgt ttcgcgcgcc gcaccactcc gtgagcgaag ccggactcgt
      241 cggcggcgga gacgttccgc gcccgggcga agtgagcctt gcgcaccacg gcgtgctttt
      301 tttggacgag ctcgctgaat ttcggcgcag cgcgctcgaa gcgctacgcc agccgctcga
      361 agacggcgtc gtgtgcatcg ctcgcgcacg cgcgcgcgct tggtttcccg cgcgtcccct
      421 gctggtcggc gccgtgaacc cctgcccttg cggctatttc tcgcaccccc gccgccgctg
      481 cacctgctcc gaggacacgc gccagcgcta ccgcgcccgc ctgagcggcc cgctcgtcga
      541 tcgcctcgac atccacgtcc ccgtcccgcc cgtcgaagtc tcggctctga cggcgccgcg
      601 ccacggcgag tcctccgaag ccgtccgcac gcgtgtcaac cgcgcgcgcg acgtccagcg
      661 cgaacgcgcc cgcgcgctcg gcttcacggg acgcgtcaac tccgcactct cgggccgcga
      721 gctcgaacgc gccgcgccgc tcgaccgcac gagtcagcgc ttactcgaag tcgccgcgga
      781 caaactcggt ctttcggcgc gtgcattcgt caaagtgctg cgcgtggcac gcacgattgc
      841 ggatctcgaa ggggaagacc gcgtgcggca gccgcacgtc gcggaggcga ttcagggacg
      901 gctgctcgat cgggaggtgg ttcggtaacg cctccggcaa gtgcgcgcgc ctgcggacgc
      961 cgttcgtgtc tcttcatgac gggcgccgat ttcggccagg gacccaaggg aactgcgaga
     1021 cgcggggctc ggcgttccgc tattctggga gcatgggcga aaactccagc gcaccacgca
     1081 ccgcttgccc gcactgcaag cagcgggcag gcgtccgctt ttggtacctg ctcccttcga
     1141 gcaactcccg tcgagtgctc acgtgcgtgc attgcggcgg acactacgac ctggccgatg
     1201 gctcgaagat ggcttccatc ttcggagcgc tcttggggct cggcccaggc gtgtacctgc
     1261 tcggcaagat cgtccaattc ggccataacg cgacgccgta taagatcctc ggtaccgtcg
     1321 cctgcttctc gctgttcgtc gtcctctcca tggtcgcggg agcactgacg ctcaggctcg
     1381 tcgcgaagcc ttgagggtcc gcgacccggc taccgcgagc tcgtgcgctc cgaatcggcg
     1441 cgcgttcgtc acgtaaacgt tccttcgagc ggggggcggc ggtgtgagag tgcgcggcta
     1501 tcgcgcgggc ttacccggcg actctcgaag gagtttctat gcacgttcgt aagactgtag
     1561 tggcggctcg ccttagctgt ttcgctctcg tgaccacgtg cctcggcggt tgcgccggag
     1621 cggccgagcc cgaaacagag gccggctccg tgagccaagc gcaagacgcc gagcacggcg
     1681 accagtgcga ctgcgagctg ccggaatccg aaggcgccaa caagtccaaa aacctggcga
     1741 tttatgggga cgccccgtac ggcacgaccc cgacggatac ggccgagttc ctcgcgagcc
     1801 ctgccttcat cgctgcggtg aacgccgatc ccgcggtgtc gctcgtcgtc cacgtgggcg
     1861 acattcactc gggcaagcag tactgcaccg aggcgtacga tcgatccatc tacgacctgt
     1921 ggaagggctt tagcgatccg ctcgtctaca cgccgggcga caatgagtgg agcgactgcc
     1981 acaaagtcgc agaagggggc ggcgcgtaca accagacgac gggaaacatc gacttcgtgc
     2041 tcggcgccga cggtcagccc gtcgattatg ccggcggtga tccggtcgcg aacctcgcac
     2101 tcgtgcgttc gatcttcttc gcccaaccgg gcgcgaccct cggtggtcgc aaacgcgtcc
     2161 tctcgcaagc cagctgcgcg agctcggctc gtccgagcga cctaaatttc gtcgagaacg
     2221 tgatgtggaa ggactcgagc gtgctgttcg tcacgattaa cctgccgggc ggctcgaaca
     2281 acgacaacga cgtctggtac ggggcgcccg cggcgtcggt ggctcaaacc aacgaagtcg
     2341 cggagcggac ggccgcggac ctcgcctggc tcgatcgtgc gttcaccgtc gcttcgcacg
     2401 gcaaggtggc cggcatggtc atcgtcgccc aagcggacat gtgggatccg gaaaagggcg
     2461 cggcgcatca aacggcctac gagccctttc tccagcacat cgcggctcat gcactggcgt
     2521 tcgggaagcc cgtgctgatg ctgaacggcg actcgcacgt ctatcagtcg agcaatccgt
     2581 tcgccgcggg cgaccctgcg agcgccattc accccggcta cgacgtgccg aatttccacc
     2641 gcatcgtcgt gcacggcagc accgtgccgc tcgagtacct gcgcctcacg gtcaat
//
LOCUS       DATIML010000415         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_949635, whole genome shotgun sequence.
ACCESSION   DATIML010000415 DATIML010000000
VERSION     DATIML010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_949635"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="VLJ38_07175"
     CDS             complement(<1..531)
                     /locus_tag="VLJ38_07175"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HSU39330.1"
                     /translation="MRAYELRREGLEHLVAIERPQPKAGPGEVVVRVRAASLNYRDWL
                     IANGRYGRAPLKLSLVPLSDGAGEVVEVGAQVTRWSPGARVVACFFRDWIDGPPDEQK
                     RAAALGGTTDGVLAEYVALRADALVEVPAGLSFEEAATLPCAGVTAWVSLVTTGGLTA
                     GETVLALGTGGVSVFVL"
     gene            complement(593..844)
                     /locus_tag="VLJ38_07180"
     CDS             complement(593..844)
                     /locus_tag="VLJ38_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39331.1"
                     /translation="MVSRPHARRRAQLLSTARANPEFGLRVVHELSALTRHTFVSELA
                     RPELPPSERRPKLAKCVSPYSETNGLAAQLAVFARAARR"
     gene            891..>1829
                     /locus_tag="VLJ38_07185"
     CDS             891..>1829
                     /locus_tag="VLJ38_07185"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU39332.1"
                     /translation="MQVPFSPRPIVAELAAWGNFASRCGRLVLDPKSRFASTGGHALA
                     LALIVAASFALRVYVSRHCSFWLDEVWTRHDAALGWPELLRGPSREHPPLMFWFVRAS
                     MALFGTGETAIRLPSLLFGGVLLVGVYLLCLELELHATQALVVVASVALSPFFARHAT
                     EARQYSMLPAFTTFATLFALRLLRTPGSFRALLGFSLSAAAAAATQYFGLAYAAALIA
                     ALAAGAVWAWRRGDALPPLSARSLVVVGGLCIGLAIVALRAIWLARFYTEHQNGFSTR
                     DLFTSILREFSFFHERPLAAEVEPFVAAAGLVALGLR"
BASE COUNT          259 a          643 c          587 g          340 t
ORIGIN      
        1 cagcacgaac acgctgacgc caccggtccc gagcgcgagc acggtctcac ccgccgtgag
       61 gccgcccgtc gtcacgaggc tcacccaagc cgtcacaccg gcgcagggta atgtggccgc
      121 ttcctcgaac gagagtcccg caggcacttc cacgagcgcg tccgcgcgca gcgcgacgta
      181 ctcggccaat acgccgtcgg tcgtgccacc gagcgccgcc gcgcgcttct gctcgtcggg
      241 cgggccgtcg atccagtctc ggaaaaagca cgcgacgacg cgggcaccgg gcgaccagcg
      301 cgtgacctgc gcgcccactt ctacgacctc gccggcgccg tcggaaagcg gcacgagcga
      361 caacttgagc ggagcgcgcc cgtaacgtcc gttggcgatc aaccaatcgc ggtagttgag
      421 gctcgccgcg cgcacccgca cgaccacctc acccggccct gctttcggct gcggccgctc
      481 gatcgcgacc agatgctcga gtccctcccg acgcaattcg tacgctcgca tccgagccat
      541 tttccgcctc ggcacccgcg agcgcaaggt ggcaagctgg cgaacgcgtt cgtcagcgcc
      601 gagcggcccg cgcaaaaacc gcgagctgcg ccgccaggcc gttcgtctcc gaatacggtg
      661 agacgcattt ggcgagctta gggcggcgct cggacggcgg gagctcggga cgtgcgagct
      721 cgctcacgaa agtgtggcgc gtgagcgcgg agagctcgtg cacgacacgc aggccgaatt
      781 cggggttcgc gcgcgcggtc gacagcaact gcgccctgcg gcgagcgtga ggcctagaga
      841 ccatgtccgc gcgtgtatcg ggctgtggca ccgcggggca acttttcgac atgcaagtac
      901 cttttagccc gcgcccgatc gtcgcggagc tcgccgcctg gggcaatttt gcgtcacgat
      961 gtggccgctt ggtgctcgat cccaaaagcc gcttcgcctc gaccgggggc catgccctcg
     1021 cactggcgct catcgtcgcc gcgagtttcg cgcttcgcgt ctacgtttcg cgacattgct
     1081 cgttctggct cgacgaagtt tggacacgcc acgacgcggc gctcggttgg ccggagctct
     1141 tgcgtggtcc gtcgcgcgag cacccgccgt tgatgttctg gttcgttcgc gcgtcgatgg
     1201 cgctcttcgg cacgggggaa acggcgatcc gccttccctc actcttgttc ggaggcgtgc
     1261 tgctcgtcgg ggtgtacctg ctctgtctcg agctcgagct gcatgcgacg caagctctcg
     1321 tcgtcgtggc ttcggtcgcg ctttcgccgt tcttcgcgcg ccacgcgacg gaagcacgcc
     1381 agtattcgat gctgcccgcc ttcacgacct tcgcgacgct cttcgccttg cggctactgc
     1441 ggacgccggg gagctttcgc gcgctgctcg gcttctcact gagtgcggcc gccgcagctg
     1501 cgactcaata tttcggactt gcgtacgctg cggctctgat tgccgcgctc gccgctggcg
     1561 ccgtgtgggc ttggcgacga ggtgacgcct taccgcccct atcggcacgt tcgctcgtcg
     1621 tcgtgggcgg gctgtgcatt ggcttggcga tagtagcgct ccgggcgatc tggctcgctc
     1681 gcttctacac ggagcaccaa aatggcttct ccacacgcga ccttttcacc agcatcttga
     1741 gggaattttc cttttttcac gagcgtccgc tcgcagcaga agtcgaaccg ttcgtcgctg
     1801 cggccggcct cgtcgcgctc ggactccgg
//
LOCUS       DATIML010000416         5522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_663732, whole genome shotgun sequence.
ACCESSION   DATIML010000416 DATIML010000000
VERSION     DATIML010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5522
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_663732"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..484)
                     /locus_tag="VLJ38_07190"
     CDS             complement(59..484)
                     /locus_tag="VLJ38_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39333.1"
                     /translation="MSELTAKSFETRLRELVAGFGRERSNDACVECERCTACAHSTFC
                     RDSERLVRCHFCVRSALCTDCSHCRGSKGLIACQHCVDCEGCSTSSYLVRCVSLTGST
                     YCFGCVGLSQRDFHILNEPYARRDYFALTKRLAQELRIA"
     gene            complement(488..925)
                     /locus_tag="VLJ38_07195"
     CDS             complement(488..925)
                     /locus_tag="VLJ38_07195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39334.1"
                     /translation="METPAAPAASEARSVAPAAASVPARRSARIVASGTRNADSAEVE
                     RERLLARLLASQGRAMISRAADECRRAGVEFPSSQAVQLQLLEHVDESLAREALATLG
                     RLLAAEPPLKRPILEQRLKRLEDSADEEATRGAAAELRRSLRA"
     gene            1384..1860
                     /locus_tag="VLJ38_07200"
     CDS             1384..1860
                     /locus_tag="VLJ38_07200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39335.1"
                     /translation="MPAIVRLPDAGAWHATASGTFTLLEHHATESRLALRVWLAPRLV
                     RPEACEADARLVRPSLPGGDVSGVVEARRLEAPAGFDVRLVVGVEPRAGGVHGYALAV
                     GAGTSRCYLAAYETESSGELAAERVAERLAVVVSGVLETLRVPNAGGRVPPLPRVE"
     gene            2088..2447
                     /locus_tag="VLJ38_07205"
     CDS             2088..2447
                     /locus_tag="VLJ38_07205"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSU39336.1"
                     /translation="MADHIRQLRLETGLTQAELASRAGVTVETVARLERVLRGRSSAN
                     SNPSLETLVRLASALGVEVAELLSEPSRPRPKEDRISMILRTANPATRRRVLRVAEAL
                     VREDHAEERPAVRNKRR"
     gene            complement(2613..3827)
                     /locus_tag="VLJ38_07210"
     CDS             complement(2613..3827)
                     /locus_tag="VLJ38_07210"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSU39337.1"
                     /translation="MPSARTTAVSIHLHVGSRYESAKDNGICHFLEHMLHRGTASHPS
                     AHAQALAFERIGATLGAATYADHGVLSVVVPPASVSEVIELLAEVCQAPIFDAIDVER
                     GIVREEILESLDARGRRTAPDDLLREVLFPGHPLGFPITGTLKTLASFDRKELARCHA
                     RHYTRDLVVTVAGAFSAPRVRRTVARSFRLPAGRAPRVRAPRPLRGPALCHVRDASSQ
                     TALRFGFRAPGIKDRAEPATELLLRVIDDGTSTRLYHRLCDERGLCYDVSALYEPHAD
                     TGLLELAADCSYEHMAAVAEELVTICTDLKERGPSDDELDKARARLGWQLDAMSDSPA
                     EVAAFCGFAELFGLPRTPAERLAQFANLNRNAVRAAARRIFRADGLALLTVGTLRARE
                     NKTLTRAVTRLR"
     gene            complement(3878..>5522)
                     /locus_tag="VLJ38_07215"
     CDS             complement(3878..>5522)
                     /locus_tag="VLJ38_07215"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSU39338.1"
                     /translation="ANLKQECAVEYAGNCLDQKDFFAAYGLAARGLDPKRARMMEVKK
                     QVLEGLAERELLAAEAERLGLAVSDDRVDRELTLGHARVPLPAEEAEGLSFGLGLCRR
                     DMSGYRCEPGSPMGVRQLQVSRTEGEPFDYKVYEKEIRIVANRGPKEFRAAQERELLA
                     ETLRELVRERARISENEAFSIYERSRSRAVVRSVVLTRDWFAKYAIDTSDAAVEKWEA
                     LNAPPVDEAFKADKDKFAVGCPLVSEIAVPLPENALDNEKADAKAKLDALRQRITKGD
                     PFEAVAREASSAPSAVFGGHVGCLSATPGLGTEALVEAANKLAPGALSDVIETPRALY
                     LLRVDGKLDAARLEREARLQIARNLYVRFAADQALRVFAGELVRQTKGGAKLEDVTRT
                     LSDELARKATPAAKTKMPAGAATKAEPAVPPALLAADRPRFEVSSPFPVSGNPLPELE
                     PREPIATRAFSLAGPDAIDEHPIETATGLVVLQLKEKMPVSREDFEKEKWPLVRMLQQ
                     AKGNEALTRYVADLRKRAGSKLKIDDRFSQEKKGESVED"
BASE COUNT          821 a         1899 c         1907 g          895 t
ORIGIN      
        1 tcccagtggt cgagcgcgtg cttccacagc gtttcgagcg ccgcgagcga ggccatgctc
       61 aagcgatgcg gagctcctgc gcgagccgct tggtgagcgc gaagtagtcg cgacgtgcgt
      121 aaggttcgtt caggatgtga aaatcgcgtt ggctcaagcc cacgcagccg aagcaatacg
      181 tcgagcccgt gagcgacaca cagcgcacga ggtacgagct ggtcgagcag ccctcgcagt
      241 cgacgcagtg ctggcaggcg atgagcccct tggagccgcg gcagtgcgag cagtcggtgc
      301 aaagcgcgga gcgcacgcag aaatggcagc gcacgagccg ctcggaatcg cggcagaacg
      361 tcgagtgggc gcaggccgtg cagcgctcgc actcgacgca cgcgtcgttg ctgcgctcgc
      421 gtccgaaccc agcgacgagc tcacgcaggc gagtctcgaa gctcttcgcc gtgagctcgc
      481 tcatcgctca ggctcgcagg gaacgccgca gctccgcggc cgcaccgcgc gtcgcttcct
      541 cgtcggcgct gtcctcgagg cgcttgagtc gctgctcgag aatcggccgc ttgagcggcg
      601 gctccgccgc gagcaggcga ccgagcgtgg cgagcgcttc gcgcgcgagt gattcgtcga
      661 cgtgctcgag cagctgcagc tgcacggctt ggctcgacgg aaactcgacg ccggcgcgcc
      721 ggcactcgtc ggcggcgcgg ctgatcatcg cgcggccttg gctcgcgagc aggcgcgcga
      781 gcaagcgctc gcgttcgacc tcggcgctat ccgcgttgcg tgtcccgctc gcgacgatgc
      841 gcgccgaccg gcgcgccgga acgctcgcgg cggccggcgc gacgctcctg gcctccgaag
      901 cggctggggc cgcgggagtc tccacggggt cctgcgcctc cgccggagcg acggccgggc
      961 tcgctcccgg cgtgggtcgc cgcgccgcga acacgatcgg ttcgatgatg ggtcgtccgc
     1021 cacgccttgc gctccgccgc tcatcgcggc cgccgcgcct ctgccgttct cggtgcatgc
     1081 tgttctgaac gcccgcgcac cacacccgag tgcgctcgtg atacctacgc ctgcccgatt
     1141 cataacatgc ccgcgcgcag cctgaccatg gggaaacttg gccgcgaccg ccgctggacc
     1201 cgctgccgaa ccgcccttcg gcgggtcaat tggttgcgtt cggttagcct gggagttggg
     1261 ctttttagcg caatttgggg ctgcggctcc gcaccagccc cccagcccac gaggccggcc
     1321 gccgcccacg ccgaccccgc cccagtgttc gaccgtgact ggggcgaaag ggatttgagt
     1381 cgagtgcccg ccatcgtccg cctgcccgac gcgggcgctt ggcacgccac ggcgagcggc
     1441 accttcacgc tgctcgagca ccacgcgacc gagtcgcgac tcgcgctccg ggtgtggctt
     1501 gcgccgcgcc tagtccgtcc cgaagcgtgc gaagcggacg cgcggctcgt tcgaccgagc
     1561 ctgcccggcg gtgacgtgag cggcgtcgtg gaggcgaggc ggctcgaggc gcccgcgggg
     1621 ttcgacgtgc gcctggtcgt cggcgtcgag ccgcgagccg gcggcgtgca tggctacgcg
     1681 ctcgcggtcg gagccggcac gagtcgttgc tacctcgcag cgtacgagac ggagagctcg
     1741 ggggagctcg cggccgagcg cgttgccgaa cggctcgccg tcgtcgtttc cggcgtcctc
     1801 gagaccctgc gagtgccgaa cgccggcggc cgcgttccac cactcccaag ggtggagtga
     1861 ttccatacga tttcatccgg ccgcgcgtct gatggcggtc gcgtgaactc gccgctgttt
     1921 cacagccaag aaaagggctc gaccggatgg ccgattgctg gcaagacgtc ctccgttcaa
     1981 gtccaggcgc agaggtctaa tgacttcggg actgaagatc gtaactatcg cgccgatcaa
     2041 cgggcgggag tctgtgaaac tcgaaattgt ccgacgtacc gacgcgattg gccgatcaca
     2101 tccgacagct tcgccttgag acaggactca ctcaagccga gctcgcatca cgcgcaggcg
     2161 tgaccgtaga aacggtcgcg cgactcgagc gcgttcttcg cggacgttct tccgcgaact
     2221 cgaacccttc actcgagacg ctcgtgcggc tcgcgagcgc gctcggcgtc gaagtcgccg
     2281 agctgctctc cgagccctcg cgacctcgtc caaaagagga tcgcatcagc atgatcctgc
     2341 gtacggcgaa ccccgccacg cgccggcgcg tcttgcgcgt cgctgaagcg ctcgtgcgcg
     2401 aggaccacgc cgaagagcgg cccgccgtgc gcaacaagcg tcgctgacgg cgaaaacggc
     2461 ccgatccgcg gggccgcgtt ggatccgaga cgcgcgggca gcgccgaggc gatgctgcgc
     2521 cggctttcga gcgcaggacg cgctgccgct gcgcccgttc gcgcgcagtc acgcgacggc
     2581 acgcctccgc gcagtcacgc gaggcgcccc gttcagcgca gtcgggtcac ggcgcgcgtg
     2641 agcgtcttgt tctctcgcgc gcggagcgtg ccgacggtga gtagcgcgag gccgtcggcg
     2701 cggaagatgc gacgcgccgc cgcgcgcacg gcattgcggt tcaagttcgc gaactgtgcg
     2761 agccgttcgg cgggcgtgcg cggcaggccg aagagctcgg cgaagccaca aaaagcggcg
     2821 acctccgcgg gcgaatcgct catggcgtcg agctgccagc cgagccgtgc gcgcgctttg
     2881 tcgagctcgt cgtccgacgg accgcgctcc ttcaagtcgg tgcagatcgt gacgagttct
     2941 tccgcgacgg cggccatgtg ctcgtacgaa cagtccgccg caagctccaa gagccccgtg
     3001 tccgcgtgcg gctcgtacag cgccgacacg tcgtagcaaa gtccgcgttc gtcgcagagt
     3061 cgatgataga gccgcgtcga ggtaccgtcg tcgatgacgc gcaagagcag ctccgtcgcc
     3121 ggttcggcgc ggtccttgat gcccggcgca cggaagccga agcgcagcgc ggtctggctc
     3181 gaggcgtcac gcacgtggca cagcgccggg ccgcgcagtg ggcgcggcgc tcgcacgcgc
     3241 ggcgcgcggc cggccggcag gcgaaagctc cgcgcgaccg tgcgccgcac gcgcggcgcc
     3301 gaaaatgcgc ccgcgacggt gacgaccaga tcacgcgtgt agtgacgtgc gtggcagcgc
     3361 gcgagctcct tgcgatcgaa actggcgagc gtcttcagcg tgcccgtaat cggaaagccc
     3421 agggggtgcc cgggaaatag gacctcgcgc aagaggtcgt cgggagccgt gcgccgcccg
     3481 cgcgcgtcca ggctctcgag gatctcttcg cgcacgatgc cgcgctcgac gtcgatcgcg
     3541 tcgaaaatcg gcgcctgaca cacttccgcc aagagctcga tcacctcact gacgctcgcg
     3601 ggcggaacca ccaccgaaag cacgccgtgg tcggcgtacg ttgcggcccc gagcgtcgcc
     3661 ccgatgcgct cgaacgcgag cgcctgggcg tgcgccgaag ggtgactcgc cgtcccgcga
     3721 tgcagcatgt gctcgagaaa gtggcagatg ccgttgtctt tcgcggactc gtagcgcgag
     3781 cccacgtgca ggtggatgga aacggcggtg gtgcgggccg acggcatcgg cgcgagcacg
     3841 agccgaggtc ccccggacga aacggtatgt gaaatgttca atcctcgacc gactcgccct
     3901 tcttctcttg gctgaagcga tcgtcgatct tgagcttgct gcccgcgcgc ttgcgcagat
     3961 ccgcgacgta gcgcgtgagc gcctcgtttc ccttggcctg ctgcagcatc ctgacgagcg
     4021 gccacttctc cttctcgaag tcctcgcgcg agacgggcat cttctctttg agctgcagca
     4081 cgacgagccc ggttgcggtt tcgatcgggt gctcgtctat ggcgtcgggt ccggcgagcg
     4141 agaacgcgcg cgtggcgatg ggctccctcg gctcaagctc gggtagcggg ttgcccgaca
     4201 cggggaacgg cgaagacacc tcgaaacgtg gtcgatccgc ggcgaggagc gctggcggca
     4261 cggccggctc ggccttcgtc gctgcgccgg cgggcatctt cgtcttggcg gcgggcgttg
     4321 ccttgcgggc gagctcgtcg ctcagcgtgc gcgtcacgtc ttcgagcttg gccccgcctt
     4381 tggtttggcg cacgagctcg ccggcgaaga cgcgcagcgc ctgatcggcg gcgaagcgca
     4441 cgtagagatt ccgcgcgatt tgcaggcgtg cttcgcgttc gagccgcgcg gcgtcgagct
     4501 tgccgtcgac gcgcaagagg tagagagcgc gcggcgtctc gatcacgtcg gacagcgccc
     4561 ccggcgcgag cttgttagcg gcttcgacga gcgcctcggt tccgaggccc ggcgttgcgc
     4621 tcaggcagcc gacgtgaccg ccgaacaccg cgctcggcgc gctgctcgct tcgcgcgcca
     4681 ccgcctcgaa ggggtcgccc ttcgtgatgc gctgccgcag agcgtccaat ttcgccttgg
     4741 cgtcggcctt ttcgttgtcg agcgcgttct ccggcaatgg gaccgcgatt tcgctcacga
     4801 gcgggcagcc gaccgcgaac ttgtccttgt cggccttgaa tgcctcgtcg acgggcggcg
     4861 cgttcaaggc ctcccacttt tcgacggcgg cgtcgctggt gtcgatggcg tatttcgcga
     4921 accaatcgcg ggtgagcacg acgctgcgca cgacggcgcg cgagcggctg cgttcgtaga
     4981 tggagaacgc ctcgttctcc gaaatgcgcg ccctctcgcg tacgagctcg cgcagcgtct
     5041 cggccaagag ctcgcgctct tgagccgcgc gaaattcctt gggcccgcgg ttggcgacga
     5101 tccggatctc tttttcgtaa accttgtaat cgaagggttc accttctgtg cggctcacct
     5161 gcaactggcg cacgcccatg ggcgatcccg gttcgcagcg atagccagac atatcgcgcc
     5221 ggcagaggcc gagcccgaac gaaaggccct cggcctcttc ggccggcagc ggtacgcgcg
     5281 cgtgaccgag cgtgagctcg cgatccacgc ggtcgtcgga aacggcaagt ccgagtcgtt
     5341 ccgcttcggc cgcgagcagc tcgcgctcgg cgagcccttc gagcacctgc ttcttcacct
     5401 ccatcatgcg cgcgcgcttg ggatcgagtc cgcgcgccgc gagtccatac gctgcgaaga
     5461 agtccttttg gtccaagcag ttgccggcgt actcgacggc gcactcctgc ttgagattcg
     5521 ct
//
LOCUS       DATIML010000417         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1817735, whole genome shotgun sequence.
ACCESSION   DATIML010000417 DATIML010000000
VERSION     DATIML010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1817735"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2192
                     /gene="nirB"
                     /locus_tag="VLJ38_07220"
     CDS             <1..>2192
                     /gene="nirB"
                     /locus_tag="VLJ38_07220"
                     /inference="COORDINATES: protein motif:HMM:TIGR02374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008942 - nitrite reductase [NAD(P)H]
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0042128 - nitrate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase large subunit NirB"
                     /protein_id="HSU39339.1"
                     /translation="ELDTAGRYQVVAFCEEPRPAYDRVGLTSFFEKASADEMLLAGTE
                     WYRQRGIRLLLGERATGIDRRRKVILSSSGERVPYDVAVLCTGSSAFVPPIPGVDKAG
                     VFVYRTIEDLIGIRDYAKRSKRAVVMGGGLLGLEAAKAVHEMGLETHVVEFAPRLMPR
                     QLDGAGSRLLLRSIRKLGVEVHLNVSAQRVLGGERVEGIEFSEGDPIETDLLIVAAGI
                     RPRDELAREAGITVGDRGGVVIDDQLRTSDGAVRAIGECALHANTLYGLVAPGYEMAS
                     VLARNLTGDASARFEGSDLSAKLKLLGVDVASFGDPFADTTGGASILYEDLVKGVYKK
                     LVISEDRTRLLGGILVGDANEYAKLTQIMRSGSTLPDAPEELIFGAREGQSAASGLGE
                     SAQVCSCNNVTKRDVCHAIRRGECSTLGEIKAKTRAGTGCGGCVPLVADILKAEQRAA
                     GQVVREQLCEHFAFSRQELFQIVQVKGYRTFQELIGAHGSGNGCEICKPAVASILASL
                     HNEMILKSEHASLQDTNDRYLANIQRGGLYSIVPRIPGGEIVPEKLVVLGQIAQKYGL
                     YTKITGGQRIDLFGARLEQLPEIWAELVQAGFESGHAYGKALRTVKSCVGTTWCRFGV
                     QDSVKFAIEVENRYKGLRSPHKLKSAVSGCVRECAEAQGKDFGLIATEKGWNLYVCGN
                     GGMKPKHAVLLAADLDKETAIRYIDRFLMYYIQTADRLTRSSVWLENM"
BASE COUNT          383 a          716 c          753 g          340 t
ORIGIN      
        1 gagctcgaca ccgcgggccg ctaccaagtc gtcgcattct gcgaagagcc gcgcccggct
       61 tacgatcgcg tggggctcac gagcttcttc gagaaggcga gcgcggacga gatgctgctc
      121 gccggcacgg agtggtaccg ccagcgcggg atccgcctgc tcctcggcga gcgtgcgacg
      181 ggcatcgacc gccggcgcaa ggtcatccta tcctcgagtg gggagcgcgt gccgtacgac
      241 gtggccgtgc tctgcacggg ctcgagcgcg ttcgtgccgc cgatccccgg cgtcgacaag
      301 gcgggcgtgt tcgtttaccg cacgatcgaa gatctcatcg gcattcgcga ttacgccaag
      361 cgcagcaagc gcgccgtggt gatgggcggc ggcctgctcg gactcgaagc ggccaaggcc
      421 gtccacgaga tgggcctcga gacgcacgtc gtcgagttcg cgccgcgcct gatgccgcgg
      481 cagctcgacg gcgcaggttc tcgcctgctt ttgcgcagta ttcgcaagct cggcgtcgag
      541 gtgcacctga acgtctcggc gcaacgggtg ctcggcggcg agcgcgtcga gggcatcgag
      601 ttcagcgagg gtgacccgat cgagaccgac ctgctgatcg tggcggcggg tatccgtccg
      661 cgtgacgagc tcgcgcgcga agccggcatc accgtggggg accgcggcgg cgtcgtgatc
      721 gacgatcagc tgcgcacgag cgacggcgcc gtgcgcgcca tcggcgagtg cgcgctccac
      781 gcgaacacgc tctacggctt agtcgcgccc gggtacgaaa tggcgagcgt gctcgcgcgc
      841 aatctcacgg gcgacgcctc cgcgcgcttc gaaggctccg acttgtcggc gaagctgaag
      901 ctcctcggcg tcgacgtcgc aagcttcggc gatccgttcg ccgacacgac gggcggcgcg
      961 agcatcctgt acgaagacct cgtcaagggc gtctacaaga agctcgtcat cagcgaggac
     1021 cgcacgcgcc tgctcggcgg catcctcgtc ggcgacgcga acgagtacgc gaagctcacg
     1081 cagatcatgc gcagcggctc gacgctgccg gacgcgccgg aagagctgat tttcggcgcc
     1141 cgcgagggcc agtcggccgc gtccggtctc ggcgagtccg cgcaggtttg ctcgtgcaac
     1201 aacgtgacca aacgcgacgt atgccacgcc attcggcgcg gcgaatgctc gaccctcggc
     1261 gagatcaagg cgaagactcg cgcgggcacg gggtgcggcg gctgcgtgcc gctcgtcgcc
     1321 gacatcttga aggctgagca acgcgccgcc ggccaagtcg tgcgcgagca gctctgcgag
     1381 cacttcgcgt tctcgcgcca ggagctgttc cagatcgtgc aggtcaaggg ctaccgcacg
     1441 ttccaggagc tcatcggggc gcacggttcg ggcaacggct gcgagatttg caagcccgcc
     1501 gtcgcgagca tcctcgcgag cctgcacaac gagatgatct tgaagagcga acacgcctcg
     1561 ctccaggaca cgaacgatcg ctacctggcg aacattcagc ggggggggct ctattcgatc
     1621 gtgccgcgta ttccgggcgg cgaaatcgtg ccggagaagc tcgtcgtgct cgggcagatt
     1681 gcgcaaaaat acggcctgta caccaagatc acgggcggcc agcgcatcga tctgttcggc
     1741 gcgcgcctcg agcagctgcc cgaaatttgg gcggagctcg tgcaggccgg cttcgagagc
     1801 gggcacgcgt acggcaaggc gctgcgcacc gtgaagagct gcgtcggcac gacctggtgc
     1861 cgcttcggcg tgcaggactc ggtcaagttc gcgatcgagg tcgagaatcg ttacaagggc
     1921 ctcagatcgc cgcacaagct caagtcggcc gtcagcggct gcgtgcgcga atgcgcggaa
     1981 gcgcagggca aggacttcgg actcatcgcg accgagaagg gctggaacct ctacgtctgc
     2041 ggcaacggcg gcatgaagcc gaagcacgcc gtgctgctcg cggccgacct cgataaagag
     2101 acggcgattc gctacatcga ccgcttcctc atgtactaca tccaaaccgc cgaccgtctc
     2161 acccgctcca gcgtgtggct ggaaaatatg ga
//
LOCUS       DATIML010000418         4000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_949917, whole genome shotgun sequence.
ACCESSION   DATIML010000418 DATIML010000000
VERSION     DATIML010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4000
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_949917"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VLJ38_07225"
     CDS             <1..778
                     /locus_tag="VLJ38_07225"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU39340.1"
                     /translation="NVWFRYDGERSEAEAELAADGDRRAVSAARSEYVLRNISLEARP
                     GERIAIVGASGAGKSTLLALLPRLYDPSSGRVLVDGTSVREYSLLALRSAIGVVQQGS
                     FLFTGTIRDNIAYGRPDASDEEIVAAARAAYADEFIERLPDGYHALLGERGVNLSGGQ
                     QQRLSIARALLKDPRILILDEATSSLDAASERAVQDALENLMRDRTCFIIAHRLSTIR
                     HADRIVVLDQGRLVEAGRHDELVAAGGRYARLLECQTELG"
     gene            complement(803..1255)
                     /locus_tag="VLJ38_07230"
     CDS             complement(803..1255)
                     /locus_tag="VLJ38_07230"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSU39341.1"
                     /translation="MQVQQIMSRRLKVVESSATLLDAAKLMRDADVGALPVTEGGRPI
                     GIVTDRDIVVRAVADEQDPARVYVREVVTPRISTIYADQDVSDAAKLMASDQVRRLLV
                     LDRERTPVGVVSLGDLARTAEAKEPGAEALSGVSDAEHPHSWQNAKHP"
     gene            complement(1415..2332)
                     /locus_tag="VLJ38_07235"
     CDS             complement(1415..2332)
                     /locus_tag="VLJ38_07235"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HSU39342.1"
                     /translation="MSAVVATFQISACSGDDDDNGTNAGTGGTRSSGGSSARGGSSGR
                     AGNSGRAGTAGASGRAGQGATGASGGTAGRSGTGGTAGQVTTGGTAGRSATGGTVGRG
                     GTAGQTAGRGGTTAGTVGAGSGGLGEAGTAANAGSGGAAGESGGGGEGGEGGAVAQLS
                     DGEILDVASTANQGEVAEAQVAITRASATAVHDFAQMMITDHTAANANVVAVSTSTGI
                     ALTPNPVSVRLMSETQQELSLLNAASGAAFDTLYIGEQITDHQNVLALLNGTLIVEVQ
                     NADVRALLESMKTTVQAHLTAAEQIRDSL"
     gene            complement(2596..3504)
                     /locus_tag="VLJ38_07240"
     CDS             complement(2596..3504)
                     /locus_tag="VLJ38_07240"
                     /inference="COORDINATES: protein motif:HMM:NF013397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HSU39343.1"
                     /translation="MDTAEHHTPDGKDGKGERKGEGERKGEGEGAALSEAEEHEAEER
                     KHPRAQVLYETIRREGEYELDRPASALAWSGFAAGLSMGFSLLAQGLLRAYLPEAPWA
                     RLIVSLGYCVGFVVVIVARQQLFTENTLTPVIPFLAHKDARTLWKVLRLWSIVLVCNL
                     AGTFAVAAALHSAHAFSDQVRDAFGAIARQAMEGSAAQHFARAVFSGWLIALMVWMLA
                     GASARAFVVIVISYIVGLGDLSHVIAGSTEAVYAALDGELAPVAYFTRFVLPVGLGNV
                     LGGVTLVALLAHAQIAADEKQGSDVE"
     gene            complement(3556..>4000)
                     /locus_tag="VLJ38_07245"
     CDS             complement(3556..>4000)
                     /locus_tag="VLJ38_07245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39344.1"
                     /translation="APLEQKGHGGELVHYTFGAVWGGLYGLVAGTFPRARTALGGAAF
                     GVVVWAVSDNLILPAFRLSAWPHTVAPQMHAYLLGAHLVYGAAVAGTYALIEHSGPPL
                     AWLAASHWVTRNWPRFVRPTARRLTERALHLASQARAVQHTLASA"
BASE COUNT          617 a         1381 c         1345 g          657 t
ORIGIN      
        1 gaacgtctgg ttccgttacg acggcgagcg ttcggaggcg gaagcggagc tcgcagcgga
       61 cggcgacaga cgagcggttt cggccgcgcg ctcggagtac gtgctgcgaa acatttcact
      121 cgaagctcgt cccggcgaac gcatcgcgat cgtgggcgcc tcgggcgccg gcaagagcac
      181 gctccttgcg ctgctcccac gcttgtacga cccgagcagc ggacgtgtgc tcgtggacgg
      241 cacttccgtg cgcgagtatt cgttgctcgc tctgcgctcg gccatcggcg tcgtgcaaca
      301 gggctcgttc ctcttcacgg gcacgattcg cgacaacatc gcctacggcc gtccggatgc
      361 gtccgacgag gagatcgtcg ccgcggcgcg cgcggcctac gccgacgaat tcatcgaacg
      421 cctgccggac ggctatcacg ccctactcgg ggaacgcggc gtgaaccttt cgggcgggca
      481 acagcagcgc ctgtccatcg cgcgcgcgct actgaaagat ccccgcatcc tgatcctcga
      541 cgaggcgacg agctcgctcg acgccgcgag tgagcgcgcc gtccaggacg cgctcgagaa
      601 cctgatgcgc gaccgcacct gcttcatcat tgcgcaccgc ctcagcacga ttcggcacgc
      661 cgaccgcatc gtcgtgctcg atcaaggtcg cctcgtggaa gccggccggc acgacgaact
      721 cgtcgctgcc ggcggccgct atgcccggct cctcgagtgt caaaccgagc ttggctgagc
      781 cggccgccgg cagtggcaga agtcaggggt gtttggcgtt ctgccaggaa tgcgggtgct
      841 ccgcgtcgga gactcccgac agagcctcgg ctccaggttc cttggcttcg gccgtgcgcg
      901 cgagatcacc gagcgaaacc acaccgacgg gcgtgcgctc gcgatcgagg acgagcaacc
      961 gccgcacctg gtccgaagcc atgagcttgg ccgcgtcgct cacgtcctga tcggcgtaga
     1021 tggtactgat gcgcggtgtc acgacttcac gcacgtacac gcgcgctggg tcttgctcgt
     1081 cggcgacggc gcgcacgacg atatcgcggt cggtgacgat cccgatcgga cggccgccct
     1141 cggtaacggg gagcgcgccc acgtcggcgt cgcgcatgag cttggccgcg tcgagcaggg
     1201 ttgcgctcga ctccacgacc ttcaaccgtc gactcatgat ctgttgcact tgcatgtttg
     1261 cctcacattt ctcggctaga gaacgtttcc gggggaacgt tggagcgtga agcacgcgcc
     1321 gcgccgcccg gccgagctca gcgacgagcg gccgggcggg gcgcactgcg gccgcccgcg
     1381 acgaggggcg gctcgagctt cgcgaagcag cgcctcagag gctgtcgcgg atttgttcgg
     1441 ctgccgtcaa gtgtgcctgg accgtggtct tcatggactc gagcagagcg cgtacgtcgg
     1501 cgttctgcac ctccacgatc agcgtgccgt tcaggagcgc gagtacgttt tggtgatcgg
     1561 tgatctgctc gccgatatac agcgtgtcga acgcagcgcc ggaggcggcg ttgagcagcg
     1621 acaactcctg ttgcgtctcg ctcatgagcc tgacgctcac ggggttcggg gtcagcgcga
     1681 tgccggtgga agtgctcacg gccacgacgt tggcgtttgc cgccgtgtga tcggtgatca
     1741 tcatctgcgc gaaatcgtgc accgccgtcg cgctcgcgcg cgtgatcgcg acttgcgctt
     1801 cggccacttc gccttggttc gcggttgacg cgacgtcgag gatctcgccg tcgctgagct
     1861 gggccacggc gccgccttcg ccgccttcgc cgcctccgcc gctttcgccc gctgcgcctc
     1921 cgctgccggc gttcgccgcg gtgcctgctt caccgaggcc gccgctgccg gcccctaccg
     1981 tgccggctgt cgtgccccct cgacccgccg tttgaccggc tgtgcctccg cgaccaaccg
     2041 tgccgcccgt cgcgctccga cccgcggtgc ctccggtcgt cacctggccc gcggtgccgc
     2101 ccgtgccact gcgaccggcg gtgccgcccg aagcgcccgt agcgccctgt ccggcgcgac
     2161 cgctcgcccc ggcggtgcca gctcgcccgc tgttgccggc acggccgctg gaaccacctc
     2221 gagcgctgct gccgcccgag gacctagtgc ctccggtgcc cgcgttcgtg ccgttgtcgt
     2281 catcgtcgcc gctgcaagcc gagatttgga acgtggcgac taccgcgctc aaagcgatcc
     2341 acttatgcgc attcataatt caacacctca cgcgctgtcg tgcacgaagc gttccgtcgg
     2401 gcgcttgtcc gtctgaacga aacgaaacgg ccctcgcgtg aattcggggc agaccacctc
     2461 gcgcgctctc gcctcgccgc aaccggagcg ctacgtgcgc aagcgtcgcg tcggcggagt
     2521 cgagctgcgg cgcgacgcct cggcgcgctg gggctgaatg acgcgtgcgg ttcggccttc
     2581 gcaacccgac cggagttact cgacgtccga gccttgcttt tcgtcggcgg cgatctgcgc
     2641 gtgcgcgagc agcgccacga gcgtgacgcc gccgagtacg ttgccgagtc ccacgggcaa
     2701 aacgaagcgc gtgaagtaag cgacgggcgc gagctcgccg tcgagcgcgg cgtaaacggc
     2761 ctcggtcgag ccggcgatga cgtgcgacaa gtcgccgaga cccacgatgt agctgatcac
     2821 gatgacgacg aaagcacgcg ccgaagcgcc ggcgagcatc caaaccatga gcgcgatgag
     2881 ccagcccgaa aatacggctc gcgcgaagtg ttgggcggcg ctcccctcca tcgcctgccg
     2941 cgcgatggcc ccgaaagcgt cccgaacctg gtccgagaac gcgtgggcac tgtgcagcgc
     3001 ggccgccacg gcgaacgtgc cggcgaggtt gcaaacgaga acgatgctcc acagccgcag
     3061 caccttccag agcgtgcgcg cgtccttgtg agcaaggaac ggaatcacgg gtgtcagcgt
     3121 gttttcggta aagagctgct ggcgcgcgac gatgacgacg acgaagccga cacaatagcc
     3181 gagactcacg atcagtcggg cccagggcgc ttcaggaaga taggcgcgca gcagcccctg
     3241 ggcgagcagc gagaaaccca tcgagaggcc cgcggcaaat ccggaccagg cgagcgcaga
     3301 tgcagggcga tcgagctcgt actcgccctc cctgcgaatc gtctcgtaga gcacctgagc
     3361 acgggggtgc ttgcgctcct cggcctcgtg ctcctcggct tcgctcagcg cggcgccttc
     3421 gccttcgcct ttgcgttcgc cttcgccttt gcgttcgcct ttaccgtcct tgccatccgg
     3481 ggtgtgatgt tcggcagtgt ccatccagac ggcgtgcgag gcaggtttcg cgccagctga
     3541 cgggctcgga atcgctcacg ccgacgcgag ggtgtgctgc acggcgcgag cttgcgaggc
     3601 gagatggagt gcgcgctcgg tgagccggcg cgcggtcggc cgcacgaacc gcggccagtt
     3661 gcgcgtgacc caatgactcg cagcaagcca tgcgagcggg gggccgctgt gctcgatcaa
     3721 cgcgtaggtg cctgcgaccg cggcaccgta gacgaggtgc gcgcccagca aataggcgtg
     3781 catctgcggc gcgacggtgt gtggccacgc cgacagacgg aacgccggca ggatgagatt
     3841 gtcgctgacg gcccagacga ctaccccgaa ggccgcgccg cccagggcag ttcgcgcgcg
     3901 cgggaacgtt cctgcgacga gtccgtaaag accgccccag accgctccga acgtgtagtg
     3961 cacgagctct ccgccgtggc ctttttgctc gagcggggcg
//
LOCUS       DATIML010000419         5796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2682009, whole genome shotgun sequence.
ACCESSION   DATIML010000419 DATIML010000000
VERSION     DATIML010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5796
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2682009"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VLJ38_07250"
     CDS             complement(<1..205)
                     /locus_tag="VLJ38_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003157027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3079 domain-containing protein"
                     /protein_id="HSU39345.1"
                     /translation="MKSLPMVKIAWNPQHPERVCWGCDKYCRADRLACGNGSERTPHP
                     IELFGPDWLEWAREQGTYDDYDCF"
     gene            complement(324..4706)
                     /locus_tag="VLJ38_07255"
     CDS             complement(324..4706)
                     /locus_tag="VLJ38_07255"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39346.1"
                     /translation="MEPRSEVASATSFLDGGGELGALMRAYDFSATPLGPPGSWPRSL
                     KTAVRIMLTSRQPFWLGWGPELTYLYNDPYRSIIGGKHPQALGRPFREVWHEIWDVVG
                     PMAERVMTRDEGTYVEAQLLIMQRHGYQEETYYTFSYSPIPGDEGGTAGLICANTDDT
                     QRVVGARQMRTLQELSARGAKARTRREACEWSVEALGSNPQDLPFVLVYLTDATADAP
                     VLAASSPGTGALEPIAAWPWQRALETQGPELFELSGLAGPLPAGAWRREPSHAVVLPL
                     SSAGPGGRAGVLVAGLSPYRRFDDTYRGFLELVAHQVAGNVANAEAYEQERQRADALL
                     ALDRAKTEFFSNVSHEFRTPLTLMLGPLEDTLTQSDALPAADRARLELAHKNSLRLQK
                     LVNTLLDFSRIESGRTEVCYEPTDLGTFTAELASVFRSAVERAELALTVDCPPLGAGA
                     YVDREMWEKIVFNLLSNALKFTFEGEIRVVVRQGDGGVRLSVADTGTGIPAADLPHVF
                     ERFHRVQGARGRSIEGSGIGLALVRELVKLHGGNVSVESTVDRGSTFQVWLPLGDAHL
                     APTRIRAARSLATTALSRSRYVQAALGWLPSEGLAEQPARDREQSGAKPAARLLLCDD
                     NADLRAYLERLLEDGYEVEAVSDGDAALAAARRQPPDLVVTDVMMPGLDGFGLLRELR
                     ADERLQRVPVIMLSARAGESARIEGIRSGADDYLVKPFSARELLARIETRLEVSRLER
                     DLERQRRELARSEARYRGIFETAPVSILEQDHSGVRAALEELAAAGVRDLPRYLAEHR
                     DFVRHALSLVRTVDANAAALRLFGAPDKAQLLGSVGAAFAPSSEAFLAQALLAIAGDT
                     VFEAEARVRTLDGRELDTLVSVAFPRDGSSGVLVSLMDNTAQKAAERALREEARTLET
                     LNHVGRLLTAELDFERIMQSVIDAATEVAGATFGLFLHDVTEERGHTSTLCTLCGAPR
                     EAFEELGTPRDIASLLATLRSEDAVRVADVTADPRFASFPRPKGHPPVRSYLGVPVVS
                     RTGEVVGGLFFGHPQPNAFSERAKNLIVSIASHASVALDSARLYEQRAALVSQLRESD
                     RRKDEFLATLAHELRNPLAPLRNALHGLRLLGDGEPLSGSVREMMERQVGHLVRLVDD
                     LLEISRISRGTFELRRERTELAAVVRNAVEMSDPFLRAAGHELSVTLTEEPLFLDGDP
                     TRLTQILANLLNNAAKYTESRGHIGLSVSQLDGDAVISVRDDGIGIEREALPRIFEMF
                     NRGGGAKRGQSGLGIGLALARRLAEMHGGGIEAQSDGPGRGSQFSVRLPLAPAELTAA
                     SEERQESAFDARKRVLVVDDNIDAAEALGMLLEIFGAEVKLAHDGATALEQYARYDPD
                     LVLLDIGMPDMDGHEVARRIRAEHAARRTTIIALTGWGQAEDRRRSHEAGFDGHLVKP
                     APIDAVKDVLTRVPSRLRTKPDQS"
     gene            4814..>5796
                     /locus_tag="VLJ38_07260"
     CDS             4814..>5796
                     /locus_tag="VLJ38_07260"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSU39347.1"
                     /translation="MQRDALLRSVFQREEGAAYWFATASGDTATTCVGLANRVPPAPV
                     SARTTFHCFSTTKPVTALAVLQLVNEGQVSLDAPLTTYLPELPYQNGATLRQVLSHQA
                     GLPSPLPLSWVHAAAEHAGFDGAAFLAQVLREHPRSSAPGKRVRYSNIGYLLLGRLIE
                     ARRRRPYTEVVRDGVLAEAARGAASNDGYLGFELPTTKHASGYTRRWSALGAFISVLP
                     DRARLRQNERGWIKYRPFHLNGAAYGGLMGNVGGWAPLLVALARRDARLLPSAGYDSF
                     FAPQSLASGRPTGHALSWFTGKVGRHDYLCHAGGGPGYGAEIRIYPALGAA"
BASE COUNT          872 a         1949 c         2023 g          952 t
ORIGIN      
        1 cgaagcagtc gtagtcgtcg tacgtgcctt gctcgcgtgc ccactcgagc cagtccggtc
       61 cgaatagctc gatcgggtgg ggggtgcgct cgctcccgtt gccgcacgcc aggcggtcgg
      121 cacgacaata cttgtcgcac ccccagcaca cccgctcggg atgctgaggg ttccaggcga
      181 tcttcaccat cggcagcgac ttcacgcgtc tctccaaaag caaatgccgc gccggacgtc
      241 gggctccttg cgaacagcca ccggtcggcg cgcgcaagct tttcgcgagc gctgccgctc
      301 gatgcagggt ttgccgtcgc ccgttagctc tgatcgggtt tagtgcgaag ccgagacggc
      361 actcgcgtta gcacgtcttt caccgcgtcg atgggggcag gcttgacgag atggccgtcg
      421 aagccggctt cgtgggagcg gcgtcgatcc tcggcttggc cccagccggt gagcgctatg
      481 atcgtcgtgc ggcgcgcggc gtgctcggcg cgaatgcggc gggcgacctc gtgtccgtcc
      541 atgtccggca tgccgatgtc gagcagtacg agatccggat cgtagcgggc gtattgctcg
      601 agcgctgtcg cgccgtcgtg cgcgagcttc acctcggcgc cgaaaatttc gagcagcatg
      661 ccgagcgcct cggcggcgtc gatgttgtcg tccaccacga gcacgcgctt acgtgcgtcg
      721 aacgcgctct cctggcgctc ttcgctcgcc gcagtgagct cggccggcgc gagcggcagc
      781 cgcacgctga actggctacc ccgtccgggg ccgtcgctct gggcctcgat gccgccgccg
      841 tgcatttcgg cgaggcgccg cgcgagggcg aggccgatgc cgaggccgct ctggccccgt
      901 ttcgcgccgc cgccgcggtt gaacatctcg aaaatgcgcg gcaaggcctc gcgctcgatg
      961 ccgatgccgt cgtcgcggac cgagatcacg gcgtctccgt cgagctggct cacgctgagc
     1021 ccgatgtggc cgcgcgattc ggtgtatttc gcggcgttgt tcagcaggtt cgcgaggatc
     1081 tgcgtgaggc gcgtcggatc gccgtcgaga aagagcggct cctccgtgag cgtgaccgag
     1141 agctcgtgcc ccgcggcgcg caagaacggg tcgctcatct cgacggcgtt gcgcacgacg
     1201 gcggcgagct cggttcgctc gcgccttagc tcgaaggtgc cgcggctgat ccgcgaaatc
     1261 tcgagcaagt cgtccacgag gcgcacgagg tgacccacct gccgctccat catctcgcgc
     1321 acgctgccgc tcaagggctc gccgtctccg agcaggcgca ggccgtggag ggcgttccgc
     1381 aacggcgcga gcggatttcg gagctcgtgc gcgagcgtcg cgagaaattc gtctttgcgc
     1441 cggtcgcttt cgcgcagctg actgacgagc gctgcgcgct gctcgtaaag acgcgcgctg
     1501 tcgagagcaa cggaggcgtg cgaggcgatg ctgacgatca agtttttcgc gcgctcgctg
     1561 aaggcgttcg gctgcggatg cccgaagaac agcccgccca cgacctcgcc cgtgcgtgaa
     1621 acgaccggca cgccgagata gctccggacg ggcgggtgcc ccttggggcg cgggaagcta
     1681 gcaaaacgcg ggtcagcggt gacgtcggcg acgcgcacgg cgtcctcgct ccgcaatgtc
     1741 gcgaggaggc tcgcgatgtc gcgcggcgtg ccgagctctt cgaacgcctc gcgcggcgcg
     1801 ccgcagagcg tgcagagcgt ggaagtgtgt ccgcgctcct cggtcacgtc gtgcaagaag
     1861 agtccgaacg tggcgccggc cacttcggtg gcggcgtcga tcaccgactg catgatgcgt
     1921 tcgaaatcga gctccgccgt gagcaagcgg cccacgtgat tcagcgtctc gagcgtgcgc
     1981 gcctcttcgc gcagggcgcg ctcggccgct ttctgggccg tattgtccat cagtgacacg
     2041 agcacgcccg acgagccgtc gcgcgggaac gcgaccgaga cgagcgtgtc gagctcccgg
     2101 ccgtcgagcg tgcgtacacg cgcttcggcc tcgaacaccg tgtcccccgc gatcgcgagc
     2161 aacgcctgcg ccaagaaagc ctcgctgctc ggcgcgaacg cggctccgac cgaccccaaa
     2221 agctgcgctt tgtccggcgc gccgaacagg cgcagcgccg cggcgttcgc gtcgaccgtg
     2281 cgcacgagcg agagggcgtg acgcacgaag tcgcggtgct cggccaagta gcggggcaag
     2341 tcgcggacgc ccgcggcggc gagctcctcg agcgccgcgc gcacgcccga gtgatcttgt
     2401 tccaggatcg acaccggcgc ggtctcgaag atgccgcggt agcgcgcttc gctccgggca
     2461 agctcacgcc gctgacgctc gaggtcgcgc tcgagtcggc tcacttcgag cctcgtttcg
     2521 atgcgcgcca agagctcgcg cgcgctgaac ggtttcacga ggtagtcgtc cgcgccggaa
     2581 cgaatgccct cgatgcgggc gctctcgccg gcccgcgccg acagcatgat cacgggcacg
     2641 cgctggagcc gttcgtcggc gcgcagctcg cgcaagagcc cgaagccgtc gagcccgggc
     2701 atcatgacgt cggtcacgac gaggtccggc ggctgtcggc gagccgcggc gagggccgcg
     2761 tcaccgtcgc tcacggcctc gacctcgtaa ccgtcctcta gcaagcgctc gaggtacgcg
     2821 cgcaagtcgg cgttgtcatc gcagagcagc aggcgggcgg caggcttcgc gccgctctgc
     2881 tcgcggtcgc gcgccggctg ctccgcgagc ccttcgctcg ggagccagcc gagcgccgct
     2941 tgcacgtacc tgctgcggct gagcgctgtc gtcgcgagcg aacgggccgc gcgaatgcgc
     3001 gtgggcgcga ggtgcgcgtc accgagcggc agccaaacct ggaacgtact gccgcgatcg
     3061 acggtgctct cgacgctgac gttgccgccg tgcagcttga cgagctcgcg cacgagcgcg
     3121 agaccgatgc cgctgccttc gatgctgcgg ccgcgcgcgc cctgcacgcg gtggaaacgc
     3181 tcgaacacgt gcggcaaatc cgcggccggg atgcccgtgc cggtgtcggc cacgctgagc
     3241 cggacgccgc cgtctccctg acgcacgacg acgcggatct cgccctcgaa cgtgaatttg
     3301 agggcgttcg agagcagatt gaagacgatt ttttcccaca tctcgcgatc gacgtaggcg
     3361 ccggcgccga gcggcgggca gtcgaccgtg agcgcgagtt cggcgcgttc cacggcggag
     3421 cggaagacgc tcgcgagctc cgcagtgaac gtgccgagat ccgtcggttc gtagcaaacc
     3481 tcggtgcggc ccgactcgat gcgtgagaaa tcgagcaggg tgttgacgag cttctgcagc
     3541 cgcagcgagt tcttgtgcgc gagctcgagc cgcgcgcggt cggcggcggg cagggcgtcc
     3601 gattgggtca gcgtgtcctc gagcgggccg agcatcaggg tgagcggggt ccgaaactcg
     3661 tgactgacgt tgctgaagaa ctcggtcttc gcgcgatcga gcgcgaggag cgcgtcggca
     3721 cgctggcgtt cctgctcgta ggcttcggcg ttcgcgacgt tgcccgcgac ctggtgcgcg
     3781 acgagctcga ggaagccgcg atacgtgtcg tcgaagcggc gatacgggct caggccggcg
     3841 acgagcaccc ccgcgcgccc gcccgggccc gcgctcgaga gcggcagcac gacggcatgc
     3901 gacggctcgc gacgccaagc gccggccggc aaaggtccag cgagcccgct gagctcgaag
     3961 agctccggac cttgcgtttc gagcgcgcgc tgccagggcc aagccgcgat gggctcgagc
     4021 gcgcccgtgc ccggcgagga cgcggcgagc accggtgcgt cggcggtcgc gtcggtcaaa
     4081 taaaccaaaa caaaaggtaa gtcctgcggg ttcgagccga gcgcttcgac gctccactcg
     4141 caagcttcgc ggcgtgtgcg ggccttggcg cctcgagccg agagctcctg caacgtgcgc
     4201 atctgtcgcg cgccgacgac gcgctgcgtg tcgtccgtgt tggcgcagat gaggcccgcc
     4261 gtgccaccct cgtcgcctgg aatcgggctg taggagaagg tgtagtacgt ctcctcctgg
     4321 tagccgtggc gctgcatgat gaggagctgc gcctcgacgt acgttccttc gtcgcgcgtc
     4381 atgacgcgct cggccatcgg acctacgacg tcccagatct cgtgccacac ctcgcgaaag
     4441 ggacggccga gcgcttgcgg gtgcttgccg ccgatgatgg agcgataggg atcgttgtag
     4501 aggtaggtga gctcggggcc ccagccgagc cagaacggct gacgcgacgt gagcatgatg
     4561 cgcacggccg ttttcaagct gcgtggccac gaccccggcg gcccgagcgg cgtcgccgaa
     4621 aaatcgtacg cacgcatgag ggcaccgagt tcgccgccgc cgtccaagaa ggatgtggca
     4681 gaggcaactt cggagcgtgg ctccatgggc tccagcatgc gtaagttcgg acgcttggcg
     4741 tagcatgtac gagttcgctc gcctctgtga caatgtgtcc ccgtctcggc ccgctgcagc
     4801 tacgaatgtg ccgatgcaaa gagacgcact cctgcgatcc gtctttcagc gcgaggaagg
     4861 cgctgcgtat tggttcgcaa cagcctcggg ggataccgcg acaacgtgcg ttggattagc
     4921 aaaccgtgtt ccgcctgcgc cggtgagcgc gcgaacgacg tttcactgtt tctccacgac
     4981 gaagcccgtg acggcgctcg ccgtgcttca gctcgtgaac gaagggcagg tgtcgctcga
     5041 tgctccgctg accacctacc ttcccgagct tccgtatcaa aacggcgcga cgctgcgcca
     5101 ggtcctcagt caccaagctg gactgccgag tccgctgccc ctgagttggg tccacgcggc
     5161 tgccgagcac gccggcttcg acggcgcggc gtttctggcg caagtactgc gcgaacatcc
     5221 gcgctccagc gcgcccggca aacgcgtccg ctactccaat atcggttatc tcttgctcgg
     5281 gcgattgatt gaggcgcggc gacgccgccc ttacactgag gttgttcgcg atggtgtgct
     5341 ggcggaggcc gcgcgcggcg cggcgagcaa cgacggctac ctagggttcg agctgccgac
     5401 gacgaagcat gcgtccggct acactcggcg ctggtccgct ctcggtgcgt tcatctcggt
     5461 attgccggac cgcgcgcggc tgcggcagaa cgagcggggc tggatcaagt atcggccgtt
     5521 tcacttgaat ggcgccgcct atggcggcct gatgggtaat gtcggcggct gggcgccgct
     5581 gctcgtcgcg ctcgctcggc gtgacgcacg gctgttaccg tcggcgggct acgattcttt
     5641 cttcgcgccg cagtcgctgg cctcgggccg tcccaccggg cacgcgctct cgtggttcac
     5701 cggcaaggtc ggccgtcacg actacctctg tcacgcggga ggcggccccg gctatggcgc
     5761 agagatccgc atctatcccg cgctcggtgc cgcgag
//
LOCUS       DATIML010000420         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1241485, whole genome shotgun sequence.
ACCESSION   DATIML010000420 DATIML010000000
VERSION     DATIML010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1241485"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VLJ38_07265"
     CDS             <1..266
                     /locus_tag="VLJ38_07265"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU39348.1"
                     /translation="VAAARSRFVPIAMTSLATVIGLIPTALALERGTEANQPLALAVV
                     GGLTSSTILSLFLVPVMFLSLAKRAVTPSEERELAGHAEPASV"
     gene            346..>1740
                     /locus_tag="VLJ38_07270"
     CDS             346..>1740
                     /locus_tag="VLJ38_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002638024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol lysyltransferase
                     domain-containing protein"
                     /protein_id="HSU39349.1"
                     /translation="MAASMIGGERANDVRLRVLEVLRRYGWNATSFQILEPGFAYWFG
                     EPDACVAYVDTGRAWVAAGAPVAADEKLVAVARAFVRAARAARRRAVFFATERRFADA
                     DGFDSVLIGEQPLWDPAEWPRTLETVRSLREQLRRARAKGVVVSKLSPAVLADEQSAE
                     RRALDVLIERWSGMKAMPPMGFLVRVYPYSFPEERHVYVAKQDDRLVGFAGVVPIYAR
                     NGRFIEDLLRGPDAPNGTSELLVDAAMRDAAVEGVGYVTLGLAPLAGAVPFGLRLAGR
                     WSAALYDFAGLAAFKAKFRPRQWAPIYLSYPEERSMHVAVYDSLSAFSQRGLLRYGLD
                     ALLRGPTIVVRMLALLLVPWTLLLATADGARWFPAAWVQWFWVVFDVVVCGGLIVLSV
                     RWRAWLAAVLFTLVSADAVTTFVEAALFLLGRRPSAFELVVAAVAVAGPVLASVVLYN
                     ARRRTARAAGRGEEL"
BASE COUNT          199 a          577 c          638 g          326 t
ORIGIN      
        1 tcgtggccgc ggcccgctcc cgcttcgtcc cgatcgccat gacgagcctt gccaccgtga
       61 tcggcttgat cccgacggcg ctggcgctcg agcgtggcac ggaggccaat cagccgctcg
      121 cgctcgcagt cgtgggcgga ctcacgtcgt cgacgattct ttcgctgttt ctcgtgccgg
      181 tgatgttcct gtcgttggcg aaaagagcgg tgacgccgag tgaggagagg gaactggccg
      241 ggcatgccga gcccgcgagc gtttgagggc gcgactcggc gtcgtgcgcg tcgccggcac
      301 gccggatgct ttgcaaaacg gtctccaggg ttctaattgt tcggcgtggc agcttcgatg
      361 atcggcggcg agcgtgcgaa tgacgtgcgg ctgcgcgtcc tcgaagtgct gcggcgctac
      421 ggctggaacg cgacttcgtt tcaaattctg gagcccgggt ttgcgtactg gttcggcgag
      481 ccggacgctt gcgtcgcgta cgtggatacc ggccgcgctt gggtcgcggc gggtgcgccc
      541 gtcgcggcgg acgaaaagct cgtggcggtt gcgcgggctt tcgtgcgcgc cgcgcgcgcc
      601 gcgcgccgcc gcgccgtatt cttcgcgacc gagcgtcgct tcgccgatgc ggacggcttc
      661 gactcggtgc tgatcggcga gcagccgctc tgggatcctg ccgagtggcc gcggacgctc
      721 gagacggtgc ggagcctgcg ggaacagctc cggcgcgcgc gcgccaaggg cgtcgtcgtc
      781 tcgaagctgt cgccggcggt gctcgccgac gagcagagcg ccgagcgtcg cgccctcgac
      841 gtgctgatcg agcgctggag cggcatgaag gcgatgccgc ccatgggctt tctcgtgcgg
      901 gtctacccgt attcgttccc ggaggagcgc cacgtgtacg tcgccaagca ggacgaccgg
      961 ctcgtcggtt tcgcgggcgt cgtgccgatt tacgctcgaa acgggcgctt catcgaggac
     1021 ctgctgcgcg gccccgacgc tccgaacggc acgagcgagc tcctggtcga cgcggcgatg
     1081 cgcgatgccg ccgtggaggg cgtgggttac gtgacgctcg gactcgctcc gctggccgga
     1141 gcggtgccgt tcggcctcag gctcgcgggg cgctggagcg cggcgctcta cgatttcgcc
     1201 ggcctcgcgg cgttcaaagc caagtttcgc ccgcgccaat gggcgccgat ttatctctcg
     1261 tatcccgagg aacgcagcat gcacgtggcc gtctacgaca gcctctcggc cttttcgcag
     1321 cgcggcctct tgcgttacgg cttggacgcc ctcctccgcg gtccgaccat cgtcgtgcgc
     1381 atgctcgcgc tcttgctcgt gccctggacg ctgctgctcg cgacggccga cggtgcacgc
     1441 tggtttcccg cggcgtgggt gcagtggttt tgggtcgtgt tcgacgtggt cgtgtgcggc
     1501 gggctcatcg tgctcagcgt gcgctggcgc gcgtggcttg ccgcggtgct gttcacgctc
     1561 gtgagcgccg acgccgtcac gacgttcgtc gaggcggcgc ttttcctgct cgggcgccgg
     1621 ccgagcgcgt tcgagctcgt ggtcgcggcc gtcgcggttg cagggcccgt gctcgcgagc
     1681 gtcgtgctct acaacgcccg ccgccgcacc gcgcgcgccg ccggacgcgg agaagagttg
//
LOCUS       DATIML010000421         3339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_85046, whole genome shotgun sequence.
ACCESSION   DATIML010000421 DATIML010000000
VERSION     DATIML010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3339
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85046"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VLJ38_07275"
     CDS             complement(<1..857)
                     /locus_tag="VLJ38_07275"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSU39350.1"
                     /translation="MAKVRSARMRVTFHGVRGSVPAPGPQTSRYGGNTSCVEVQLSDG
                     STLALDAGTGLRELGKTLAREGRQSPVHLFLSHTHWDHVMGLPFFAPLYDKNNHLLVY
                     PLANEAQERFQRNIFDDIHFPVSVNDIPSKVEFARPEGDVWQVGSARVRRIQLNHPGG
                     AQGFRIDDEDGSSMAYLTDNEMNAARPVITVDDLARFSDGVNLLIHDAQYVPSDMPHK
                     RGFGHSLVEDVLKLGEYAKPKDLVLFHHDPDRSDDALDQIGLEAKAWLAGHAKDVGLL
                     VAHEGLAVEL"
     gene            969..1529
                     /locus_tag="VLJ38_07280"
     CDS             969..1529
                     /locus_tag="VLJ38_07280"
                     /inference="COORDINATES: protein motif:HMM:NF014659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HSU39351.1"
                     /translation="MSLAPGFLIAAPPLGDPNFDRSVVLLAAHGPDGAFGWVINGREL
                     MTLGELLVRADVVESAPSVPGSVRVGGPVSPEQVWIVYRPDPRLAEIEGQFQVGEGVT
                     ASASRQVLEAIAAGAAPTSLLALVGYAGWAPSQLEQEIARGAWLPSNLEPSLVFDVPA
                     ERLWQAAYERAGVTPMAFTSRTVGSA"
     gene            complement(1533..2315)
                     /locus_tag="VLJ38_07285"
     CDS             complement(1533..2315)
                     /locus_tag="VLJ38_07285"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF001453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HSU39352.1"
                     /translation="MEIGGRSRPFCLTALPFPPSIASASRRAHDAGVESLASSREPRA
                     ERERLARAIESGAKVEDPRILAAFGAVPREAFVPSELAELAYEDRALPIGAGQTISQP
                     SMIALMLAALEPQPTDHALEVGSGSGYAAALLGRLTASVLGLEIVPELAERARQTLAR
                     LEVPNVSIETGDGVAALGGRGPFDLILVSAAAREVPAELLEHLASGGRIAIPVGSESG
                     QHLLAGRRGADGAMHWQQSTPCVFVPLVGASSSALSSIPPPK"
     gene            2294..3160
                     /locus_tag="VLJ38_07290"
     CDS             2294..3160
                     /locus_tag="VLJ38_07290"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSU39353.1"
                     /translation="MSARLFPLSLLGAALVWLARGTGSVAQADEPPRPVRPCPPEMVS
                     VRQFCIDRWESSFVDATTGEPLSPYYPPVKSEMEAAYEYWQFARHWLGDEPAHHMPLP
                     EPSVWQTAHAFTPRAVSRPAVVPQGYLSYYTAKKACENAGKRLCTEKEWVTACGGERG
                     LKYPYGDRYKVFACNVFRPYHPGFALHQNSSIGHRDPRLNLVVEENEDPLLRLTGATP
                     SCRSHWGGDAVEDMVGNLDEWVEGEKQPVFVGGFYSRSTTKGCEARVDSHAAAYFDYS
                     LGTRCCSDAERK"
BASE COUNT          506 a         1080 c         1196 g          557 t
ORIGIN      
        1 agctcgacgg cgaggccctc gtgcgcgacg aggaggccta cgtctttcgc gtgcccggcg
       61 agccaggctt tcgcttcgag gccgatttga tcgagggcgt cgtcggagcg atccgggtcg
      121 tggtggaaga gaactaggtc cttgggcttg gcgtattcgc cgagcttgag cacgtcctcg
      181 accagcgaat ggccgaagcc gcgcttgtgc ggcatgtcgg atgggacgta ctgggcgtcg
      241 tggatgagta ggttcacgcc gtcggagaaa cgcgcgaggt cgtcgaccgt gatgacggga
      301 cgtgcggcgt tcatctcgtt gtcggtgagg tacgccatcg aagagccgtc ctcgtcgtcg
      361 atacggaaac cctgcgcgcc gccggggtga ttgagttgaa tccggcgcac gcgcgcgctg
      421 ccgacttgcc acacgtcgcc ctccggtcgc gcgaactcga ccttcgacgg gatgtcgttg
      481 acgctcaccg ggaaatgaat gtcgtcgaag atgttgcgct ggaagcgctc ctgcgcttcg
      541 ttcgcgagcg ggtagacgag taggtgattg ttcttgtcgt acagcggcgc aaagaagggc
      601 agccccatca cgtggtccca atgcgtgtgc gagaggaaca gatggaccgg cgactggcga
      661 ccctcgcggg cgagcgtctt gccgagctca cgcaagcccg tgcccgcgtc gagcgcgagc
      721 gtggagccgt cggacagctg cacctccacg cacgacgtgt tgccgccgta gcgggacgtc
      781 tgcggtcccg gcgccggtac ggaaccccgc actccgtgaa aagtcacacg catgcgcgcg
      841 cttcggactt tagccatgac tcgagcgatc ttggaaggct agaatcttcg gcttcgccgg
      901 ggccgagctg cggccgctcg ctgaagtccc gtgtcggccg gcgggacgcg ggttatgctg
      961 gggtcaccat gtcgctcgcg ccggggtttt tgatcgccgc gccgccgctc ggggacccga
     1021 acttcgaccg ctcggtggtg ctgctcgcgg cgcacggccc ggacggcgct ttcggctggg
     1081 tgatcaacgg gcgggagctc atgacgctcg gcgagctctt ggtccgcgcc gacgtcgtgg
     1141 agagcgcgcc ctcggtaccc gggagcgtgc gggtgggcgg ccccgtctct cccgaacaag
     1201 tgtggatcgt gtaccgcccc gatccgcggc tcgccgagat cgaagggcag ttccaagtcg
     1261 gggaaggtgt aacggcgtcg gcctcgcgcc aggtgctcga ggccatcgcc gcaggcgccg
     1321 caccgacgag cttgctcgcg ctcgtgggtt atgccggttg ggcgccgtct caactcgagc
     1381 aggagatcgc gcgcggcgcc tggctgccgt cgaacctcga accgagcctc gtgttcgacg
     1441 tccctgccga gcgtctgtgg caagcagcct acgagcgtgc gggcgtgacg cccatggcgt
     1501 tcacgtcgcg caccgtcggc tccgcttgac gctcatttgg gcggcgggat tgaggagagc
     1561 gccgagctcg aggcgccgac gagcggcacg aacacgcacg gcgtgctctg ctgccagtgc
     1621 atggctccgt ccgcgccgcg ccgccccgcg agcaggtgct gcccgctttc gctgcccacc
     1681 gggatcgcga tgcgcccgcc gctggcgagg tgctcgagca gctcggctgg cacctcccgt
     1741 gcagctgccg acaccaagat gaggtcgaaa gggccgcgac ccccgagcgc ggccacgccg
     1801 tcgcccgttt cgatcgagac gttcggtact tcgaggcggg ccagggtttg gcgcgcgcgc
     1861 tcggcgagct cgggcacgat ctcgagtccg agtacgctcg cagtcaggcg cccgaggagc
     1921 gctgcggcgt agcccgatcc ggagccgact tcgagcgcgt gatcggtcgg ctgcggctcg
     1981 agcgcagcga gcatgagtgc gatcatgctg ggctggctga tggtctgtcc ggcgccgatc
     2041 ggcagcgcgc gatcctcgta ggcgagctcg gcgagttcgc tcggcacgaa tgcttcgcgc
     2101 gggacggcgc cgaacgccgc gaggatgcga gggtcctcta ccttcgcgcc ggactcgatt
     2161 gctcgcgcga ggcgctcccg ttcggccctt ggctccctgg aggatgcgag cgattccacc
     2221 cccgcatcgt gggcacgccg cgaggcgctg gcaatgcttg gcggaaacgg gagggctgtg
     2281 agacaaaacg ggcgtgagcg cccgcctatt tccactttcg ttgctcggcg cggcgctcgt
     2341 ctggctggcg cgcggcacgg ggagcgtggc gcaggcggac gagccgcccc gtcccgtgcg
     2401 cccgtgcccg cccgagatgg tctcggtgcg gcagttctgc atcgatcgtt gggagagctc
     2461 gttcgtcgac gcgacgacgg gcgagccgct ctcaccctac tacccgccgg tcaagagcga
     2521 gatggaggcc gcttacgagt actggcaatt cgcgcggcac tggctgggcg acgaaccggc
     2581 gcatcacatg ccgctgcccg agccgtcggt ttggcagacg gcgcacgcct tcacgccgcg
     2641 cgcggtgtcg cgcccggctg tcgtgccgca gggttatctc tcctattaca cggcgaagaa
     2701 ggcgtgcgag aacgccggca agcggctgtg caccgaaaag gagtgggtga cggcctgcgg
     2761 gggcgagcgc ggcctcaagt atccttacgg cgatcgctac aaggtgttcg cgtgcaacgt
     2821 gtttcgtccc taccaccccg gtttcgctct ccaccaaaat agctcgatcg gccatcgcga
     2881 cccgcggctc aacctggtgg tggaagagaa cgaagaccca ctgctccgcc tcacgggcgc
     2941 aaccccgagc tgccgcagtc actggggcgg ggacgcggtc gaggacatgg tcggcaacct
     3001 cgacgaatgg gtcgaaggag aaaagcaacc cgtgttcgtc ggtggcttct actcgcgctc
     3061 gaccacgaag ggctgcgagg cgcgagtcga ctcgcatgcc gccgcttact tcgactattc
     3121 gctcggcaca cgctgttgct cggacgctga aagaaagtga aggcggcgat gcggccccgg
     3181 caagcgcgcg agaccggccg cggtgccttc aaaagttgac tcgctgtgaa gtgcccggcg
     3241 ctgaaatcac gcggtgagcc gggtcagcgg tcgcacgacg ctggcgttag agggcgcgcg
     3301 cgatagattc agcggatgcg cttcggcctg gcacgggcg
//
LOCUS       DATIML010000422         2361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4707119, whole genome shotgun sequence.
ACCESSION   DATIML010000422 DATIML010000000
VERSION     DATIML010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4707119"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(280..1137)
                     /gene="pstB"
                     /locus_tag="VLJ38_07295"
     CDS             complement(280..1137)
                     /gene="pstB"
                     /locus_tag="VLJ38_07295"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HSU39354.1"
                     /translation="MTDRTNVVRLRDATADSGELSRDASRPRQEKPEAQGAKMRTVGL
                     CAFYGNVQVLKAIDLPIAERQVTAVIGPSGCGKSTFVRSLNRMHEVVPGARIEGRVLL
                     DEQDVYARDVDPVRVRRRVGMLFQKPNPFPTLSIRDNVLAGLVLNRVPVAEPDALVEK
                     ALRQAALWDEVKDVLGRSGTSLSGGQQQRLCMARALALEPEVLLMDEPCSALDPIATA
                     RVEELIHELRQSYTIVVVTHNMQQAARVANLTAFFYMGELVEYDRTDVVFTRPKERRT
                     EDYITGRFG"
     gene            complement(1134..1973)
                     /gene="pstA"
                     /locus_tag="VLJ38_07300"
     CDS             complement(1134..1973)
                     /gene="pstA"
                     /locus_tag="VLJ38_07300"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HSU39355.1"
                     /translation="MKDRFFVRLFVDRALRAACLLATVLALVPLASVLWFVIVRGAHG
                     LSLTFFTGLPKPVGEPGGGMAHAIVGSLEIVGLACAMGIPAGVLAGIHLSDSEDTRFA
                     RFVRFSADVMAGVPSIAVGLFVYVLVVRRMQSFSALAGAMALAVLMLPTITRATEELL
                     RLVPESLREAALGLGVPKWRATVRVMLRTAAPGIATGIMLAVARAMGESAPLLFTSFN
                     NRGFASSPAEPTASLPVNIYTYAVSPYADWHEQAWAAALVLVTLVLCLNIAARWLVRG
                     RLP"
     gene            complement(1970..>2361)
                     /locus_tag="VLJ38_07305"
     CDS             complement(1970..>2361)
                     /locus_tag="VLJ38_07305"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSU39356.1"
                     /translation="VLRSVPSSLREGALALGATRSEMVRLAVLPYARSGLLGAVLLGL
                     GRALGETMAITMVIGNRPDISASLFAPSYTMASVIANEFTEATGELHLAALAEIGLLL
                     FVLTIALNIAARLLVGRVGRVALGGRL"
BASE COUNT          423 a          844 c          791 g          303 t
ORIGIN      
        1 cgctcaccgc gcgcgaggac gcgcccgacc cctcgaccga cggctgcgcg ccgctcggct
       61 gcccgaacgc cggtcgcgcg agcgacacga cgagcaacaa cgagaccgga agcgtcctca
      121 ccccgcgcag tgtcaagcga gcccactttt ctagaagtgc cgacgcggcg tcaaccccaa
      181 aaataagccg ccaactggct cgaacgcgtc attttcggcg cccaccgccc ggctccgcgc
      241 gcgagcgccg ggtgaaccac gcgcggcgaa ccgcctcgct cagccgaagc ggcccgtgat
      301 gtagtcttcg gtccggcgct ctttggggcg cgtgaacacg acgtccgtgc ggtcgtattc
      361 gacgagctcg cccatgtaga agaacgccgt gaggttggcg acgcgcgctg cttgctgcat
      421 gttgtgcgtc acgaccacga tcgtgtagct ctgccggagc tcgtggatga gctcctcgac
      481 gcgtgccgtc gcgatgggat cgagcgccga gcagggctcg tccatgagta gcacctcggg
      541 ctcgagcgcc agagcgcgcg ccatgcacaa gcgctgctgc tggccgccgg acaggctcgt
      601 cccggagcgc ccgagcacgt ccttgacctc gtcccagagc gccgcctggc gcagcgcctt
      661 ttcgaccaag gcatccggct cggcgacggg cacgcggttc aagacgagcc ccgcgagcac
      721 gttgtcgcgg atcgacagcg tgggaaaggg attcggcttt tgaaacagca tgccgacacg
      781 acgccgcacg cgcacggggt cgacgtcgcg cgcgtagacg tcctgctcgt cgagcagcac
      841 gcgcccctcg atgcgtgcgc cgggcacgac ttcgtgcatg cggttgagcg agcgcacgaa
      901 cgtcgatttg ccgcagccgg acgggccgat cacggccgtg acctgccgct ccgcgatcgg
      961 caaatcgatg gctttgagca cctgaacgtt gccgtagaag gcgcataacc ccacggtgcg
     1021 catcttggcg ccctgcgctt ccggcttttc ttgacgtggc cgcgacgcgt cgcgcgaaag
     1081 ctcgccggag tcggccgtcg catcacgcaa gcgaacgacg ttggttcgat ccgtcacggc
     1141 agccgcccgc gcacgagcca gcgtgccgcg atgttgagac agagcacgag cgtgacgagc
     1201 acgagcgcgg ccgcccaggc ttgctcgtgc cagtcggcgt acggtgagac ggcgtacgtg
     1261 tagatgttca cgggcagcga cgcggtcggc tccgccgggc tcgaggcaaa gccccggtta
     1321 ttgaaggagg tgaagagcag cggagcactt tcacccatcg cccgcgccac ggccaacatg
     1381 atgcccgtcg cgatgcccgg cgcggccgtg cgcagcatca cacgcacggt cgcccgccat
     1441 ttcggcacac cgagccccaa ggccgcctcc ctgagcgact ccggcacgag ccgcaaaagc
     1501 tcctccgtcg cgcgcgtgat ggtcggcagc atcagcaccg cgagcgccat ggcgccggcg
     1561 agggccgaaa agctctgcat ccgccgcacg acgagcacgt acacgaacag gcccacggcg
     1621 atcgacggca cgcccgccat cacgtccgcc gagaagcgca cgaagcgggc gaagcgcgtg
     1681 tcttccgagt ccgagagatg gatacccgcg agcacgcccg ccgggatccc catcgcgcag
     1741 gcgagtccca cgatctcgag cgagccgacg atggcgtgcg ccatcccgcc gcccggctct
     1801 ccgacgggct tcggcaagcc cgtgaagaag gtcagcgaga ggccatgtgc gccgcgcacg
     1861 atcacgaacc agagcacgct cgcgagcggc acgagcgcga gcaccgtcgc caagaggcac
     1921 gcggccctga gcgcgcggtc gacgaagagg cgcacgaaga agcgatcctt cacagccgcc
     1981 ccccgagcgc gacgcgcccg acgcgcccga cgagcaggcg cgccgcgatg ttgagcgcga
     2041 tcgtcaggac gaagagcaag agcccgatct cggcgagcgc cgcgaggtgg agctcgcccg
     2101 tcgcttcggt gaactcgttg gcgatgacgc tcgccatcgt gtaggagggc gcgaacaaag
     2161 aggcgctgat gtcgggccga ttaccgatca ccatcgtgat ggccatggtt tcgccgagcg
     2221 cgcggccgag cccgagcaac acggcgccca gcaaaccgga ccgcgcgtac ggcagcaccg
     2281 cgagccgaac catctccgaa cgcgtcgcgc cgagcgcgag cgcgccctcg cgcagcgacg
     2341 acggcacgga gcgcagcacc t
//
LOCUS       DATIML010000423         2895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1528528, whole genome shotgun sequence.
ACCESSION   DATIML010000423 DATIML010000000
VERSION     DATIML010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1528528"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..397)
                     /locus_tag="VLJ38_07310"
     CDS             complement(14..397)
                     /locus_tag="VLJ38_07310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39357.1"
                     /translation="MTPLSHRSLARLQAAYYVATGVWPIAHMRSFEAVTGPKVDHWLV
                     RTFGALVTAAGAALAAGSREPPSRALVVLGGGTAIALSAAEIVYVLERRISPVYLLDA
                     GLELAIAAGWLSLVCTSDSVELPRT"
     gene            560..2449
                     /locus_tag="VLJ38_07315"
     CDS             560..2449
                     /locus_tag="VLJ38_07315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39358.1"
                     /translation="MALALVCAPFRYAYAPAASKVLNEGDRRLAPAYDDWGKSVGAVS
                     ETIEGALPPGAVRVNDDMLRLGRRAFYEETFGNEIFLTDVLGIIAGPLGLRQYAAAIL
                     ALGGKPTTNLKLELDEPATIGGQVFERGTIIDTGLDVPTGALLPLGMAVRHRGAAIEV
                     GITCAACHSTVDARSGKVIHGAPNSDLNAGVLLAFASNSAAFFPHAALDSLERFSSPT
                     SGTIRASDGTRAPLPDPEKLEQAVDATLLAWPPGYFDSMIDLVAAPTQIPDAFSFESY
                     PYSWSGAFAAGPFRGLSVQTNNVHALNADTLTHADASRTLFGIDKELYLATVLRHAAA
                     TRFRYDPARGETPSAFFHGRDPTPEAPGINELVQVPTYPGVSLIAPNGLWNSSPGYRV
                     WEQVNAMSAWQNTLVPPNPPGSRDSELARLGRAVFERAGCPSCHAGPAYTNHRIIPAE
                     LIGTEPTRARAFRATEPLLKAPLALAFDQRVPLRGAERLIAVPTDELDPEQVRLGLGY
                     EGQGGYKVKGLIGLYWSAPYLHDGGVAASADATELGVSGTLLKGTLPDPAASLRALVD
                     RSLRARVVVANEASPRLRAMHVCGCGHEFWVDAPGGYSSREQAALVEFLLTLELVRDA
                     RRAEH"
     gene            2557..>2895
                     /locus_tag="VLJ38_07320"
     CDS             2557..>2895
                     /locus_tag="VLJ38_07320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39359.1"
                     /translation="MAVLVAVAAGCTGREPGDTDTSISDEALNRSGHVSQAELRGREL
                     PRARPFGRPEPVALFFGSMPTGVTVSASGRIFVNFPRWGDPVPFTVGELVHGAVVPYP
                     DQSVNSSPAAD"
BASE COUNT          457 a          998 c          983 g          457 t
ORIGIN      
        1 cctgggcctc ttgtcacgtg cgtggcagct cgaccgagtc ggacgtacac accaggctga
       61 gccagcccgc ggcgatggcc agctcgagcc cggcgtcgag caggtagacg ggcgaaatgc
      121 ggcgctcgag tacgtagacg atttcggcgg cggacagggc aatcgcggtg ccgccaccga
      181 gcaccacgag cgcgcgcgag ggcggttcac gtgacccggc ggcgagtgcc gcgcccgccg
      241 cggtcacgag cgcgccgaac gtcctcacga gccagtggtc gaccttcggt cccgtgacgg
      301 cctcgaagct cctcatgtgc gcgatgggcc agacgcccgt ggcgacgtaa tacgccgcct
      361 gcagtcgcgc gagggagcgg tgcgagaggg gagtcaccgc ccgtgagacg cagcgttcgt
      421 acccgcgcct gggtgaattc acacaggctc attggctcga aacctgcccc gcaggcgctg
      481 ggtggaacca agcagcgcgc ggtcgtggac gaagccgctt cattcgcgtc tcgctccgtt
      541 cttactggcc ggggccgtcg tggcgctcgc gctcgtgtgc gcgccgtttc gctacgccta
      601 cgctcccgcc gcgtccaagg tgctgaacga aggtgatcgc cgcctcgcgc cggcgtacga
      661 cgactggggc aagtcggtcg gcgccgtatc ggagacgatc gagggcgcgc tgccgcccgg
      721 cgccgtccgg gtcaatgacg acatgctgcg gctcggccgc cgcgcgtttt acgaagagac
      781 gttcggtaac gagatttttc tcacggacgt gctcggcatc attgcgggac cgctcgggtt
      841 gcgccagtac gccgcggcca ttttggcgtt gggaggcaaa ccgacgacca acctgaagct
      901 cgaactcgac gagcctgcga cgattggcgg gcaggtgttc gagcgcggaa ccatcatcga
      961 tacggggctc gacgtgccga ctggtgcgct cctgccgctc ggcatggcgg tgcggcaccg
     1021 cggggccgcg atcgaagtgg gcatcacctg cgcggcgtgt cattcgaccg tcgacgcccg
     1081 cagcggcaag gtcatccacg gagcgccgaa cagcgatctc aacgcggggg tgctgctcgc
     1141 gttcgccagc aacagcgccg cgttctttcc gcatgcagcc ctcgactcgc tcgagcgctt
     1201 cagctccccc acgagcggca ccatccgcgc gagcgacgga acgcgcgcgc ccttgcccga
     1261 tcccgaaaag ctcgagcaag cggtggacgc gacgctgctc gcctggccgc ccggctactt
     1321 cgactcgatg atcgacctcg tcgcggcgcc gacgcaaata ccggacgctt tctcgttcga
     1381 gagctacccg tatagctgga gcggcgcctt tgccgcgggg ccgtttcgcg gcctgagcgt
     1441 gcagacgaac aacgtgcatg cgctcaacgc cgacaccctg acgcacgccg acgcgagccg
     1501 gacgctcttc ggtatcgaca aggagctcta tctcgcgacc gtgctgagac acgccgcggc
     1561 cactcggttt cgctacgacc cggcgcgggg cgagactccg agcgcgttct tccatggacg
     1621 cgatccgacg cccgaggcgc cgggcatcaa cgagctcgtt caggtcccga cctatcctgg
     1681 cgtcagcctc atcgcgccga acggcctttg gaacagctcg cccggctatc gggtgtggga
     1741 gcaagtgaac gccatgtcgg cgtggcagaa cacgctcgtc ccgccgaacc cgccaggatc
     1801 ccgcgacagc gagctcgcgc ggctcggacg cgcagtgttc gaacgggcag gctgcccgag
     1861 ctgtcatgct gggccggctt acaccaacca tcgcatcatc cccgccgagc tcatcggcac
     1921 ggagccgacg cgagctcgag cgtttcgcgc gaccgagccg ttgctgaagg ctccgctcgc
     1981 gctcgcgttc gatcaacgtg tgccgctgcg cggcgcggag cggctcatcg ccgttcccac
     2041 cgacgagctc gatcccgagc aggtgcgttt gggcctcggc tatgagggtc agggtggcta
     2101 caaggtaaag ggtctcatcg gactctattg gtcggcgccg tatctgcacg acggcggagt
     2161 ggcagcgagt gccgacgcca ccgagctcgg cgtgagcggc acgctactca aggggacctt
     2221 gcccgaccct gccgcctcgc tgcgtgcact cgtcgaccgc tccttgcggg cacgcgtcgt
     2281 ggtagcgaac gaagcctcgc cgcggctccg cgccatgcac gtctgcggct gtggtcacga
     2341 gttctgggtg gacgcgccgg ggggatactc gtcgcgtgaa caagccgctc tggtcgagtt
     2401 cctgctcacg ctcgagctcg tgcgagacgc gaggcgcgct gagcattgag aaggcgctcg
     2461 cacgccggac acgaccgcgg cacacgcgtt gctaaaccga gccgtatggc aaacccccgg
     2521 agttcacgcg cgagctcagg aacatccatc tcggcgttgg cagtgctcgt cgccgtcgcg
     2581 gccgggtgta ccggacgcga accgggggat accgatacct cgataagcga cgaagcgctc
     2641 aaccgtagtg gccacgtgag ccaggccgag ctccgtggcc gcgaattgcc ccgcgcgagg
     2701 ccgttcggac gacccgaacc ggtggcgctg ttcttcggct cgatgccgac gggcgtgacg
     2761 gtctccgcgt ccgggcgcat tttcgtcaac tttccgcgct ggggcgatcc ggtgccgttc
     2821 acggtgggcg agctggttca cggcgccgtc gtgccgtacc cggaccaaag cgtgaacagc
     2881 tcacccgccg ccgac
//
LOCUS       DATIML010000424         1889 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5284046, whole genome shotgun sequence.
ACCESSION   DATIML010000424 DATIML010000000
VERSION     DATIML010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5284046"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VLJ38_07325"
     CDS             complement(<1..255)
                     /locus_tag="VLJ38_07325"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HSU39360.1"
                     /translation="MRYPAGHKQQSREKILNAAADLFRRRGIAATGLDSVMGAAGLTA
                     GAFYLHFRSKDALIAAAVAKAGERAHERWLTPLAGVTGRAW"
     gene            284..1273
                     /locus_tag="VLJ38_07330"
     CDS             284..1273
                     /locus_tag="VLJ38_07330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39361.1"
                     /translation="MSSPAAAKLACAARMIAIAVPRRFGYSSRPRAGMRGCTLFSAIV
                     GVCVVVFWAQTAAASSPTSTAAYTPGTDVVTQPAPAPAASAEPLGPQGDVLAPEQHGT
                     LTVERVAQWRGFLFYPSMPTAGTFRFALGASYDAVDPAVVYGMTFRFPQLTLDAIGWL
                     GNGWSLKGHINSMIVLNEFLFGAGYTFGSGPLSLEIDASVGVYVGSVGAVIGGTSGVG
                     GFNALFVAPEYRPELTLGYDFGKLAVSLRGSLLLMGPERARVGDTWGGFDNAHPFAGH
                     SEMLYVENTTKRSSVWYFGAGAMTTRAYYALWILFPDSPALYTYPRMVVGYEY"
     gene            1263..>1889
                     /locus_tag="VLJ38_07335"
     CDS             1263..>1889
                     /locus_tag="VLJ38_07335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39362.1"
                     /translation="MNTKLAAFASAALFALSSCEQVKEVSIPMFPDGGLLRTGTALSR
                     DQLLGFEGMFSVVHGSALLGTETSVRTSPGTISILTDKNDGYAVLGGACLPDGRVVVE
                     GYWQYPTEVEAGLVRLFVDQPDAAAALCTDQAPPPTTDFTLSGAYGHNDDFPTIPLTL
                     QWNRELKPWRGRFFTIAHHGGCEVTDYCGASPNSLETIRLSERVGCNAA"
BASE COUNT          283 a          660 c          613 g          333 t
ORIGIN      
        1 ccaggctcgt cccgtgacgc ccgcgagcgg cgtgagccag cgctcgtggg cgcgctcgcc
       61 ggccttggcg accgcggcgg caatcaaagc gtccttggaa cgaaaatgaa ggtagaacgc
      121 gccggccgtt aggcccgcag cgcccatcac ggaatcgaga cccgtcgcgg cgatcccgcg
      181 gcgccggaac agatcggcgg cggcgttcag gatcttctcc cggctctgct gcttgtgccc
      241 ggcggggtag cgcaccgccg cttagtatga cgagcgtaat tcaatgtcca gcccggcggc
      301 cgcaaaactt gcgtgcgcgg cgcgcatgat cgcgattgcc gtgcctcgtc gtttcggata
      361 ctcgtcacgt ccaagagcgg gcatgcgcgg ctgcaccttg ttttcggcca ttgtcggcgt
      421 gtgcgtcgtg gtcttttggg cgcaaaccgc cgcagcgtcc tcgccgacga gcacggcggc
      481 ctacacgccg gggaccgacg tcgttaccca gcctgcgccc gccccggctg ctagcgccga
      541 acctctgggg ccgcagggtg acgtcctcgc gcccgagcag cacggcaccc tcacggtgga
      601 gagggtcgcc cagtggcgcg gcttcttgtt ctacccgtcg atgcccacgg ccggcacgtt
      661 ccgcttcgcc ctcggagcga gctacgacgc cgtcgatcct gccgtcgtct acggcatgac
      721 ctttcggttc ccgcagctca cgctcgacgc catcggctgg ctcggcaacg gctggtcgct
      781 caagggccac atcaactcga tgatcgtgct gaacgagttc ttgttcggcg cagggtacac
      841 gttcggctcc ggtccgctgt cactcgaaat cgacgcgagt gtgggcgtct acgtcggcag
      901 cgtcggcgcc gtcatcggcg gcacctcggg cgtcgggggc ttcaatgcgc tgttcgtcgc
      961 gccggagtac cgccccgagc tcacgctcgg ctacgacttc ggcaagctcg ccgtatcgct
     1021 gcgcggctcc ctcttgctca tgggtccgga gcgggcgcgc gtcggcgaca cgtggggcgg
     1081 cttcgacaat gcgcacccgt tcgccggaca cagtgagatg ctttacgtcg aaaacacgac
     1141 gaaacggagc tccgtttggt acttcggcgc tggcgccatg acgacgcgag cctactacgc
     1201 gctctggatc ttgttcccgg attcgcccgc gctctacacg tacccgcgca tggtggtcgg
     1261 ctatgaatac taagctcgcc gccttcgcct ctgcggcgct gttcgcgctc tcgagctgcg
     1321 agcaggtgaa ggaagtctcg attccgatgt tccccgacgg gggactgttg cggacgggaa
     1381 ccgccctcag ccgcgaccag ctcctcggct tcgagggcat gttcagcgtc gtccacggta
     1441 gcgccctctt gggcaccgaa acgtccgtac ggacgagccc gggcaccatt tcgatcctca
     1501 cggacaagaa cgacggctac gccgtactcg gcggcgcgtg cctccccgac gggcgcgtcg
     1561 tcgtcgaagg ttactggcag tatccgacgg aggtagaggc cggcctcgtg cggctcttcg
     1621 tcgatcagcc ggacgcggcg gcggcgctct gcaccgacca agcgccgccc cccaccacgg
     1681 acttcacgct cagcggcgcc tacggccaca acgacgattt ccctacgatc ccgctcactc
     1741 tgcagtggaa tcgcgagctc aagccgtggc gcgggcgctt cttcaccatc gcgcatcacg
     1801 gcggctgcga agtgaccgat tactgcggcg cgagcccgaa cagcctggag acgattcggc
     1861 tgtcggagcg tgtcggctgc aacgcggcc
//
LOCUS       DATIML010000425         3830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4707483, whole genome shotgun sequence.
ACCESSION   DATIML010000425 DATIML010000000
VERSION     DATIML010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3830
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4707483"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1432
                     /locus_tag="VLJ38_07340"
     CDS             <1..1432
                     /locus_tag="VLJ38_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39363.1"
                     /translation="FTVSVSIVPSTNGVDGIIGLSALPAITAGDFAVAMRFNTDGSVD
                     ASNGAAYASVNPLHYAAGSAYRVLFVVDAGGRSYSAWVNGRLLAKNYAFRGDPGVPLA
                     RFATAVNSGAGALRACDFADSSDDRLTWLHHSELYAEAGGEHALAGRADGALLITGET
                     GTELVDANGAVVTTFMHGGRGVALDAASDLYLFGEFTGSYDGGGGAYASAGGTDVFVS
                     KYDAQFKHLYTRTLGGAGDDALGAFDVNDAGDVAVVVGSTLMRFDAQGALLWTRRVSD
                     ERAVVAVDAAGTVYLAENASGGPAFTLTTLTAQGAPLWTRSATAGNKGAGSVLALRAT
                     PGGGVAVSGSISGTLELGGAPLRATRTDRAETFVAWLDPAGAYLDGSVLDVTPNSGLG
                     LDDTGTATIGGYRPNPNTYVLERIEFDGSSVTGVTELGGHELTRGLFLGTASAPTVDR
                     AGNTYWSVTARMLPEQSASFLMKVSR"
     gene            complement(1483..>3830)
                     /gene="aceE"
                     /locus_tag="VLJ38_07345"
     CDS             complement(1483..>3830)
                     /gene="aceE"
                     /locus_tag="VLJ38_07345"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HSU39364.1"
                     /translation="STYASSAVLYEVGFNHFFHGKDAGSAGDQIYYQGHAAPGIYSRA
                     FLEGRLSSEQLERFRREAERGRGLSSYPHPRLMPDFWEFPTVSMGLGPVNSIYQARFN
                     RYATARGITDATASKVWCFVGDGETDEPETLGALQIAARERLDNLVWVVNCNLQRLDG
                     PVYGNGKIIQQLEGIFRGAGWNVIKVVWGPEWDPIFARDTEGVLRRHLNAVVDGQWQR
                     LTIATGDVVRKEFFALDPRMLELVAHVSDEELARFRRGGHSLRKVYAAYRQAVENGDG
                     RPTVILAHTVKGWMLGEGFEGVNVTHQKKKMGLSDLQHFRDILELPIPDSALEHPPLF
                     HPGPKSPEVEYLLERRRALGGLIPKRGHAQVKLELPKSEVYEEFYKGMEKGEASTTMV
                     FARLLAKLIRDKKVGRRVVPIVPDEARTFGMEALFGQVGIYSAVGQVYDPIDKGKLLY
                     YKETKDGQVLEEGITETGSMASFIAAATSYAVHGQPMIPFYIFYSMFGFQRTGDLMWA
                     AGDCMARGFVLGGTAGRTTLNGEGLQHEDGHSHVHATTVPAVRAYDVSFAFELAAIIE
                     DGMKRMFENEENVWYYLTLQNENYPMPPMPEGAKDGILRGLYRFRPAKQKLGKHVQLW
                     GSGSIMLQVLRAQELLERFGVSADVWGVTSYQRLRSEALECERENRLHPEAPPRVPYI
                     TEVLKGVEGPFISASDYMKTMGDLVARWIPGRFVPLGTDGFGMSDTREALRRHFEVDA
                     ECVAIGALDALRLEGKLSNAELASAIRELGVDADKVPPLSI"
BASE COUNT          611 a         1276 c         1309 g          634 t
ORIGIN      
        1 gttcacggtt tcggtgtcca tcgtaccgtc taccaacggc gtcgacggca tcatcggcct
       61 ctctgcactg cccgcgatca ccgccggcga cttcgcagtc gccatgcgct tcaacaccga
      121 cgggtccgtc gacgcctcca acggcgcggc ctacgcgagc gtcaatccgc tgcactatgc
      181 cgcgggcagt gcgtaccgcg tacttttcgt cgtggacgcg ggcgggcgct cctactcggc
      241 gtgggtgaat ggccgcttgc tcgcgaagaa ctacgcgttt cggggcgacc cgggcgtgcc
      301 gctcgctcgc ttcgcgacgg cggtcaactc cggcgcgggc gccctccggg cgtgtgattt
      361 cgcggactcg agcgacgacc ggctgacctg gctgcaccac agtgagctct acgcggaagc
      421 cggcggcgag cacgcgctcg ccggacgtgc cgacggcgcg ctgctcatca cgggcgagac
      481 cggaaccgag ctcgtggacg cgaatggcgc cgtcgtgacg accttcatgc atggcgggcg
      541 tggcgttgcg ctcgacgcgg cgagcgacct ctacctgttc ggcgagttca cgggcagtta
      601 cgacggcggc ggcggggcgt acgcgagcgc gggcggcacg gacgtcttcg tctcgaagta
      661 cgacgcgcaa ttcaagcacc tgtacacgcg cacgctcggc ggcgcgggcg acgacgcgct
      721 cggcgcgttc gatgtgaacg acgctggcga cgtcgccgtc gtcgtcggct cgacactcat
      781 gcgcttcgac gcccagggtg cgctactctg gacccggcgc gtgagcgacg aacgcgccgt
      841 cgtcgcagtg gacgcggccg gcacggttta tctcgccgag aacgcgagcg gaggccccgc
      901 gttcacactc acgacgctca ctgcgcaggg cgcgccactg tggacacgga gcgcgaccgc
      961 aggaaacaaa ggcgccggca gcgtgctcgc gcttcgagcg acgccgggcg gcggcgtggc
     1021 agtgtccggc tcgatctccg ggacgctcga gctcggcggg gcgccgctcc gcgccacgcg
     1081 caccgatcgc gccgagacgt tcgtcgcttg gctcgatccg gccggcgcgt acctcgacgg
     1141 cagcgtgctc gatgtgacgc cgaactcggg ccttgggctg gacgacaccg gcacggcgac
     1201 gatcggcggc taccgtccga atccgaacac gtacgtgctc gaacgtatag aattcgacgg
     1261 cagcagcgtg acgggcgtca cggagctcgg cgggcacgag ctcacgcgtg gcctctttct
     1321 cggcacggcg tcggcaccga ccgtcgatcg cgccggcaac acctactggt cggtaacggc
     1381 gcgcatgctg cccgaacagt cagcctcgtt cctcatgaag gtgtcgcgct gacgagctcg
     1441 gagcggaagc ttcgccggcg ccgggaaagc gcgcgaacgc gctcaaatcg atagcggcgg
     1501 caccttgtcg gcgtcgacgc cgagctcgcg gatcgcgctg gcgagctccg cgttcgacag
     1561 cttgccttcg agccggagcg cgtcgagcgc gccgatcgcg acgcactcgg cgtcgacctc
     1621 gaagtggcgg cgcagcgcct cgcgcgtgtc gctcatgccg aagccgtccg taccgagcgg
     1681 cacgaagcgg ccggggatcc agcgcgcgac gaggtcgccc atcgtcttca tgtagtcgga
     1741 cgccgaaatg aagggccctt cgacgccttt cagcacctcg gtgatgtagg ggacgcgcgg
     1801 gggtgcttcg gggtgcaggc ggttctcgcg ctcgcactcg agcgcttccg agcgcaggcg
     1861 ctgatagctc gtgacgcccc agacgtcggc ggacactccg aagcgctcga gcagctcctg
     1921 ggcgcgcagg acctgcagca tgatcgagcc ggaaccccag agctgcacgt gcttgccgag
     1981 cttttgcttc gcgggtcgga agcgatagag cccgcgcaaa atcccgtctt tggcgccctc
     2041 gggcatgggc ggcatcgggt agttctcgtt ctggagcgtc aggtaatacc agacgttctc
     2101 ctcgttctcg aacatgcgct tcatgccgtc ttcgatgatg gcggcaagct cgaaggcgaa
     2161 cgacacgtcg taagcgcgca cggcgggtac ggtcgtcgcg tgcacgtggc tgtggccgtc
     2221 ctcgtgctgc agaccctcgc cgttcagcgt cgtgcgtccc gccgtgccgc cgagcacgaa
     2281 gccgcgcgcc atgcagtcac cggccgccca catgaggtcg cccgtgcgct ggaagccgaa
     2341 catcgagtag aaaatgtaaa acgggatcat cggctggccg tgcaccgcgt acgaggtggc
     2401 cgccgcgatg aacgaagcca tcgagcccgt ctcggtgatg ccctcttcga gcacctgacc
     2461 gtccttggtc tccttgtaat aaaggagctt gcccttatcg atcgggtcgt aaacctggcc
     2521 gacggccgag tagatgccga cctggccgaa caaggcttcc atgccgaagg tgcgcgcttc
     2581 gtccggcacg atcggcacga cgcgccggcc gaccttcttg tcgcggatga gtttggcgag
     2641 caggcgcgcg aagaccatcg tggtcgacgc ttcgcccttc tccatgccct tgtaaaactc
     2701 ctcgtaaact tcggacttcg gcagctcgag cttgacttgc gcgtggccgc gcttggggat
     2761 caagccgccg agcgcgcgcc ggcgctcgag caggtactcg acctccgggc tcttcggccc
     2821 ggggtggaag agcggagggt gctcgagcgc ggagtcgggg atcggcagct cgaggatgtc
     2881 ccgaaagtgc tgcagatccg agaggcccat cttcttcttc tggtgcgtga cgttcacgcc
     2941 ttcgaagccc tcgccgagca tccagccctt cacggtgtgc gcgaggatga cggtgggacg
     3001 tccgtcgccg ttttccaccg cttggcgata ggcggcgtac accttgcgca agctgtggcc
     3061 gccgcgtcgg aaacgtgcga gctcctcgtc cgagacgtgc gcgacgagct cgagcatgcg
     3121 cggatcgagc gcgaaaaatt ccttgcgcac gacgtcgccc gtcgcgatcg tgaggcgctg
     3181 ccattgaccg tcgacgacgg cgttcaggtg ccggcgcagg acgccttcgg tgtcacgcgc
     3241 gaagatcggg tcccactcgg ggccccagac caccttgatc acgttccagc cggcgccgcg
     3301 gaagatgccc tcgagctgct ggatgatctt gccgttgccg tagaccgggc cgtcgaggcg
     3361 ctggaggtta cagttgacga cccaaacgag gttatcgagc cgctcgcgcg ccgcgatttg
     3421 aagggcaccg agcgtctcgg gttcgtcggt ctcgccgtcg ccgacgaagc accagacctt
     3481 ggacgccgtg gcgtcggtga tgccgcgtgc cgtcgcgtag cgattgaagc gcgcctggta
     3541 aatcgagttc acggggccga gccccatgct gacggtggga aattcccaaa agtccggcat
     3601 caagcgcgga tgcggatacg acgagagtcc gcgaccacgc tccgcctccc gccgaaaacg
     3661 ctcgagctgc tcgctcgaga gccggccctc gaggaacgcg cgcgagtaga tgcctggagc
     3721 cgcgtggccc tggtaataga tttgatcgcc cgcgctgccg gcgtccttgc catggaagaa
     3781 gtggttgaag cccacttcgt aaaggacggc gctcgacgcg taggtcgaga
//
LOCUS       DATIML010000426         1871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2104707, whole genome shotgun sequence.
ACCESSION   DATIML010000426 DATIML010000000
VERSION     DATIML010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2104707"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VLJ38_07350"
     CDS             <1..330
                     /locus_tag="VLJ38_07350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39365.1"
                     /translation="LFMANGFQAVSTCGVHAAFYWGKRQWQPYPRGATLVSHDARGLP
                     AFYGWAGTPANVLDNPFAAHCREIAPKPWLSSALARTFWSHAPFSAIARELTSYVVYR
                     CPGDTSR"
     gene            complement(337..>1871)
                     /locus_tag="VLJ38_07355"
     CDS             complement(337..>1871)
                     /locus_tag="VLJ38_07355"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39366.1"
                     /translation="VVFASTLLPRRLSVLSVVYPWMLTLTGAGLALTMGPKAEPFLFL
                     CGGLFIGSLVLETRTLALLSLFAVAATVAAIDLSGQSFVPPYRAAWLNGLTSLLSVVL
                     PASIAGRMLVNALAAALAERTALVRDLLEESRIRESTTRALEATRTQLTHAQKMELVG
                     QMAGGIAHDMNNALTAIMGGASLLDDDAREMRELIQEAAAHAGKLTHQLMVFSRRDTS
                     QPRPIDLTATIAQQLKAIRRLISSEITLSSELPNEPVVVLADPTHVLQVLLNLTSNAK
                     DAMTTGGTLGITLQHDQERGEAVLAVRDTGPGIAPALLPQVFEPFFTTKPAGKGTGLG
                     LANVKQLIEAMGGSVAVESELGHGATFRLRIPTTNEPVRRPLPENRRTSERSGTILVV
                     DDDVRVRATVYVALERMGFNVLEASSPETVEALLARSNLKLDLLCTDVVFAGGGGARV
                     IELVRGKFPEARVLVMSGYNDDETLRRGIARGAFPFIAKPFSAETLGLAIDEALAGNP
                     VE"
BASE COUNT          315 a          616 c          634 g          306 t
ORIGIN      
        1 ctgttcatgg caaacggctt tcaagccgta tcgacctgcg gcgtgcacgc agcgttctac
       61 tggggcaagc ggcaatggca accgtatccg cgcggcgcca cgctcgtttc gcacgacgcg
      121 cgcgggctgc ccgctttcta cggctgggcc gggacgcccg cgaacgtgct cgacaacccc
      181 ttcgcggccc actgtcgcga gatcgcaccg aagccatggc tctcgagtgc gctcgcacgc
      241 acgttctggt cgcacgcgcc gttttccgcg atcgcgcggg agctcacgag ctacgtcgtg
      301 tatcgttgcc ccggcgacac gtcgcgctga gacgcgctac tccaccgggt tcccggcgag
      361 cgcctcgtcg atcgcaagcc cgagcgtttc ggcgctgaac ggctttgcga tgaagggaaa
      421 cgcaccccgt gcaatccccc ggcgcaaggt ctcgtcgtcg ttgtagccgg acatcacgag
      481 cacgcgcgct tcggggaact tcccccgcac gagctcgatc actctggcgc cgccgccgcc
      541 cgcgaagacg acatccgtac acaagaggtc cagcttgagg ttcgaacgcg cgagcagcgc
      601 ctccacggtt tcgggggagg aagcctcgag cacgttgaag cccatgcgct cgagcgccac
      661 gtagacggtg gcgcggacgc gaacgtcgtc gtcgaccacc aagatcgtgc cggaacgctc
      721 gctcgttcgc cgattttccg gcagcggacg gcgaaccggc tcgttcgtcg tcgggatgcg
      781 caggcgaaat gtcgcgccat gaccgagctc gctctcgacc gcgaccgaac cgcccatcgc
      841 ctcgatcagc tgcttgacgt tggcgaggcc gagcccggtg cccttacccg cgggcttggt
      901 cgtaaagaac ggctcgaaga cctgcggcag gagcgctggg gcaatacccg gaccggtgtc
      961 gcgcacggcg agaacggcct cgccccgctc ttggtcgtgt tgcagggtaa tgccgagcgt
     1021 accgcccgtg gtcatcgcgt ctttggcgtt gctcgtcagg ttcaagagca cttgcaagac
     1081 gtgcgtcggg tcggcgagca cgacgacggg ctcgttcggc agctccgagc tcagcgtgat
     1141 ttcgctgctg atcaggcggc ggatggcctt gagctgctgc gcgatcgtgg cggtcaagtc
     1201 gatgggccgc ggttgactcg tgtcgcgccg gctgaacacc atcaactggt gcgtgagctt
     1261 ccccgcgtgc gccgccgctt cttgaattag ctcgcgcatc tcacgggcgt cgtcgtcgag
     1321 caacgaggcg ccgcccatga tcgccgtgag ggcgttgttc atgtcgtggg cgatcccgcc
     1381 cgccatctgc ccgacgagct ccatcttttg agcgtgggtg agctgagttc gagttgcttc
     1441 gagcgcgcgc gtggtgcttt cgcgtatccg gctctcctcg agcaaatcgc gcacgagcgc
     1501 cgtgcgctcg gcgagggcgg cggccagagc gttcacgagc atcctgcccg cgatcgaagc
     1561 gggcaggacg accgagagca gcgaagtgag cccgttgagc caggctgcac gatagggagg
     1621 cacgaaagat tgccccgaga ggtcgatggc ggcgacggtc gccgcgaccg caaagagcga
     1681 gagcaacgcg agcgtcctcg tctcgagcac gagggaaccg atgaagaggc ccccgcaaag
     1741 gaagagaaag ggctcggctt tggggcccat ggtgagcgcc agcccggctc cagtgagcgt
     1801 caacatccac gggtagacga ccgagagcac gctgagccgc cgcggcagca gggtcgaggc
     1861 gaaaacgacg g
//
LOCUS       DATIML010000427         4441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3261236, whole genome shotgun sequence.
ACCESSION   DATIML010000427 DATIML010000000
VERSION     DATIML010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4441
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3261236"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1585
                     /locus_tag="VLJ38_07360"
     CDS             239..1585
                     /locus_tag="VLJ38_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39367.1"
                     /translation="MSVVLVAGAASAAQPWLQDRRFGEGIGLRAGRFEFHPSISTEFG
                     YDSNFFQRANSERPIDAWRLRVTPSLTLETLSDRRRGTDLASTPMLELQANTFVSYSE
                     MFGSAEVTDQRRFDVGVGGRAQIAPRRPLSGDVYADYLRNGEPSNLPGTDHTFDRGEI
                     RGGAGVTWAPGGGLFDWRLGYEAQYNYFEDQPYTALQNVQQSILTRGRWRILPRSGFL
                     YDARYTFIRYTRSRSPQPDGDDLQARLGFSGLVTNRIAFLVMAGWNSTFYQAHPSTTT
                     ALQPTTPRNYDGYVAQAEFKYFVMAQQTEGDSAQTGLSSITAGYLRDVNNSYLGSFYT
                     RDRAYLGFDYFLAGAFVANVQGGFSSYHFPTVNPSNPAFSQQHVDVAVFGEYRFSDTF
                     GLNATFLYDRAIGKGPTRPDGPDGVLVSPATPASVAVYDNLEYSRIQAYLGLRLFW"
     gene            1619..2257
                     /locus_tag="VLJ38_07365"
     CDS             1619..2257
                     /locus_tag="VLJ38_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HSU39368.1"
                     /translation="MLSLSAQSGGGALLVRARAWCFMLAVAAASGCGSHDGTHVQYLP
                     APSDKTVVGAGDIFTMQIVSEKDLPSEYQVASDGTVDLPYVHTIQVAGLEPQEIARLV
                     RQKLIDGKILTNPIVVVQVKEYRSRAVILLGQVARPGSFPLTPGLTLMQAISLAGGLS
                     QIANDDNVTLTRKLPNGSTTTVTISVDAITEGHAPDVPLQAGDRVYVHERLF"
     gene            complement(2290..3306)
                     /locus_tag="VLJ38_07370"
     CDS             complement(2290..3306)
                     /locus_tag="VLJ38_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39369.1"
                     /translation="MRRARAERLAFRCLVLGIALAAPARAETAPCASGASVSPCFDAD
                     PLWIPTGPTPFATVPSARTLAPKKLSFVLAAGYSDRPVELVTPSPHPDGQEIAVVRAT
                     STLTLGARYGLTRGIDLGIALPFVPFQVGSGADSVTTQQSEPLAAVALRDPRLELGAT
                     LFGRDETAPFALGTRLTVGVPLGSEHAVAGAATFTVAPGLTGALHFGRLELGADLGWR
                     ITRAVSFASVREGSAFTAALATSITLLEKPALALGAEAWLSAHVAGRPAGVSEDVVDL
                     PAEWLATLRAAPSDAWCLLAAGGSGIPLSRVLDSNGGTSAALGVTSPDFRLLLLARYT
                     LEVE"
     gene            3497..4105
                     /locus_tag="VLJ38_07375"
     CDS             3497..4105
                     /locus_tag="VLJ38_07375"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HSU39370.1"
                     /translation="MAILSAQRPLILGSASPRRREILTGLGLPIFVLPADVDESVQAG
                     EGPTAYLERIVGDKLRRVTERLADREGAAVLVADTSVIVEEDILGKPTDIADAVRLLT
                     RLCGRMHRVLTRYAIGLPNGALVVARTVATDVWLRAASPDEIVAYARSGEGLDKAGAY
                     AAQGVGAFLVERMNGSYTNVVGLPACEVVLDLKQHGLLGPFP"
     gene            4102..>4441
                     /locus_tag="VLJ38_07380"
     CDS             4102..>4441
                     /locus_tag="VLJ38_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39371.1"
                     /translation="MNFGVRAVRARVSRTLAALVGRDDAPRFRDALVLGVVALALRMI
                     VVAYAAGRFPPADDGSFYDVVASRIARGLGYTWAWPDGAITYAAHYPVGYPAMLAAGY
                     ALFGARPVVAM"
BASE COUNT          723 a         1491 c         1485 g          742 t
ORIGIN      
        1 tgtcaccgta acggtcgagg gcgtgcccaa caccgatccg accgagtatc cgaccaatcc
       61 ggtgaccgcg agtcaggcgc ctgtcgcgag tccgcctcct ccgccggcca ttggtagccc
      121 aagcatgcct aatatgtagt atgtaggccg ctgtcgttcg caacgcggtt ctctactttt
      181 atcttcaaac gggcactggg cgacgagcat gaatttgcgg ctgatagttg cggcctcgtt
      241 gagcgtggtg ctggtggcgg gcgcggcgtc ggctgcacaa ccgtggctcc aagatcggcg
      301 tttcggtgaa ggcatcggtc ttcgcgcggg ccgcttcgag ttccacccca gcatctccac
      361 cgaatttggt tacgacagta acttcttcca gcgcgccaac tcggagaggc cgatcgatgc
      421 gtggcgtttg cgggtgacgc cttcgcttac gctcgagacg ttgagcgatc ggcgtcgcgg
      481 cactgacctg gcttccacgc cgatgctcga gctgcaggcg aacacgttcg tctcgtacag
      541 cgagatgttc ggttctgcgg aagtcaccga ccagcgccgt ttcgacgtcg gtgtcggcgg
      601 cagggcgcag attgcgccca ggcgcccgct gagcggagac gtgtacgcgg actacttgcg
      661 aaacggcgag ccgagcaact tgcccggcac cgatcacacc ttcgaccgcg gcgagatacg
      721 tggcggcgcg ggcgtcacgt gggcaccggg cggcggcctc ttcgattggc gcctcggcta
      781 cgaagcgcaa tacaactatt tcgaggatca accgtacacc gcgctgcaga acgtccagca
      841 aagcatcctg actcgcggac gctggagaat ccttccgcgc agcggtttcc tgtacgacgc
      901 gcgctatacg ttcattcgct acacgcgcag ccgctcacca caacccgacg gcgacgatct
      961 gcaggcgcgg ctcggcttca gcggcctcgt gacgaaccgc atcgcgttcc tcgtgatggc
     1021 aggttggaac tcgactttct accaggccca tccaagcacc accacggcgc tgcagccgac
     1081 caccccgcgc aactacgacg gttatgtcgc gcaagcagaa ttcaagtact tcgttatggc
     1141 ccagcagacg gagggggatt cggcgcagac cggactctcg tccatcacgg ccggctacct
     1201 gcgcgacgtg aacaacagct acctcggctc gttctacacg cgcgatcgcg cctacctcgg
     1261 gttcgattac ttcctcgccg gcgcgttcgt cgcgaacgtg cagggcgggt tttcgagtta
     1321 ccactttccg acggtcaatc cgtccaaccc cgccttctcg cagcagcacg tcgacgtagc
     1381 ggtgttcggc gagtaccgct tcagcgacac cttcgggctg aacgcgacct tcctgtacga
     1441 tcgcgcgatc ggcaagggac cgacccgtcc tgacggtcct gacggtgtct tggtttcgcc
     1501 ggcgacccct gcgtcggtcg cagtttacga caacctcgag tacagccgca ttcaggctta
     1561 cctcggcctg cggctcttct ggtgaccgcg aacacccgag atcggcgact cccgaacgat
     1621 gcttagcctg tccgctcaga gcgggggcgg agcactcctc gtgcgcgccc gcgcgtggtg
     1681 cttcatgctc gccgtcgcag ctgcgagcgg ctgcggctcg cacgacggaa cgcacgtgca
     1741 atacctgccc gcaccgtcgg acaagaccgt ggtcggcgcg ggcgacatct tcacgatgca
     1801 gatcgtatcg gagaaggacc taccctccga gtatcaggtc gcctccgacg gcacggtgga
     1861 tctgccgtac gtgcacacga ttcaagtggc ggggctcgag ccgcaagaga tcgcgcgtct
     1921 cgtgcggcag aagctcatcg acggcaagat cctcacgaat cccatcgtgg tcgtgcaggt
     1981 gaaagagtac cggagccgcg ccgtgattct gctcgggcaa gtcgcgcgcc ccggtagctt
     2041 cccgctcacg cccgggctca cgctgatgca ggcgatttcg ctcgcgggcg gtctgagcca
     2101 aatcgccaac gacgacaacg tcacattgac gcgcaagctt cccaacggga gcacgacgac
     2161 ggtgacgatc agcgtcgacg ccatcacgga gggccacgca ccggacgtgc cgctccaggc
     2221 gggcgaccgc gtttacgtgc acgagcggtt gttctagccc gtggggccgc tccgtcgcgg
     2281 cgcgcgccgt cactccactt cgagcgtgta gcgcgcgagc aggagcaggc gaaaatcggg
     2341 gctcgtgacg ccgagcgcgg cgctcgtgcc gccgttcgaa tcgaggaccc tagacaacgg
     2401 aatgccggaa ccgcccgcgg cgagcaggca ccaggcgtca ctcggcgccg cgcgcagcgt
     2461 cgcgagccat tcggcgggca gatccaccac gtcttcagac acgcctgctg gacggcccgc
     2521 gacgtgcgcg ctgagccagg cttcggcgcc gagcgcgagc gccggctttt cgaggagcgt
     2581 gatcgaggtg gcgagcgctg ccgtgaacgc gctgccttcg cgcacgctgg cgaaggagac
     2641 ggcgcgcgtg atgcgccagc cgagatccgc gccgagctcg agccggccga agtggagcgc
     2701 gcccgtgagt ccgggcgcga cggtgaaagt cgcggcgcca gcgacggcgt gttcgctgcc
     2761 gagcgggacg ccgacggtga gccgtgtccc gagtgcgaaa ggcgcggttt catcgcgccc
     2821 gaagagcgtc gcgccgagct cgagcctggg atcacggagc gcgacggccg cgagcggctc
     2881 ggactgttgc gtggtgacgc tatctgcgcc cgagccgacc tgaaacggga cgaacggcag
     2941 cgcgatgccc aaatcgatgc cgcgcgtgag gccgtaacgc gccccgagcg tgagggtgct
     3001 cgtcgcccgc acgacggcga tctcttggcc gtccgggtgc ggcgaaggcg taacgagctc
     3061 gacgggacga tcgctgtagc ctgccgcgag cacgaagctc agcttcttcg gcgcgagcgt
     3121 tctcgccgac ggcaccgtgg cgaacggggt cggccccgtc gggatccaca gcggatcggc
     3181 gtcgaagcaa ggcgagacgc tcgcgccgct cgcgcacgga gccgtctccg cgcgcgccgg
     3241 ggcggccagg gcgattccga ggacgaggca gcggaaagcg agccgctccg cacgcgcgcg
     3301 acgcacccgt ccgagactcg cgtctctcgc aggcgggagc ggccccccca acggcctcgc
     3361 tgggttttct cgtagcaatt ggccgctcct agcgatcgag agctggtctt ccaggaccac
     3421 tcgacgagag gctagtagtt tcgtgaacgg ctcgtgtact agaaaagctt gcccttcccg
     3481 ggcgcgactc gacgtgatgg cgatcctcag cgcacaaaga cccctgatcc tgggctccgc
     3541 ctcgccgcgc cggcgcgaga tcctcaccgg cttggggctg cccattttcg tcttgccggc
     3601 cgacgtggat gagagcgtgc aggcaggtga ggggcctact gcttacctcg agcgcatcgt
     3661 gggcgacaag ctcaggcgcg tgacggagcg gctcgccgac cgcgagggcg ccgcggtgct
     3721 cgtcgcggac acgagcgtca tcgtcgagga ggacatttta ggtaagccga cggacatagc
     3781 ggacgcggtg cgtttgctca cgcgcctatg cggccgcatg caccgcgtgc tcacgcgcta
     3841 tgccatcggg ttgccgaacg gcgcgctggt cgtcgcgcgc accgtcgcga cggacgtctg
     3901 gctgcgggcc gccagcccgg acgagatcgt cgcctacgcg cgttcaggcg aagggctcga
     3961 caaggccggc gcctacgcag cccaaggcgt cggcgctttt ttggtcgagc gcatgaacgg
     4021 ctcgtacacg aacgtcgtcg gccttccagc ctgcgaagtc gtgctcgact tgaagcaaca
     4081 tggcctgctc gggccattcc cgtgaacttc ggcgttcgcg cggttcgagc gcgtgtcagc
     4141 cggacgctcg ccgcgctcgt gggtcgcgac gacgcgccac gatttcgtga cgcgctcgtg
     4201 ctcggagtcg ttgcgctcgc gctccgaatg atcgtcgtcg cgtacgcggc ggggcgtttt
     4261 ccgcccgcgg acgacggcag cttctatgac gtcgtggcct cgcggattgc gcgcgggctc
     4321 ggctacacgt gggcctggcc ggacggcgcc atcacgtacg cggcacatta cccggttggt
     4381 tatcccgcaa tgctagccgc cggttacgcg ctgttcggcg cgcgccccgt cgtggcgatg
     4441 g
//
LOCUS       DATIML010000428         3131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_665056, whole genome shotgun sequence.
ACCESSION   DATIML010000428 DATIML010000000
VERSION     DATIML010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665056"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VLJ38_07385"
     CDS             <1..236
                     /locus_tag="VLJ38_07385"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSU39372.1"
                     /translation="VLSRRLSILGLVMRTRPVSDKIGVVERFRRQSLHRLADGTLKPL
                     VDSVFSLRDVAAAHARMEANQNVGKIVLDMSPA"
     gene            complement(259..564)
                     /locus_tag="VLJ38_07390"
     CDS             complement(259..564)
                     /locus_tag="VLJ38_07390"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSU39373.1"
                     /translation="MPTIEFLGNGFGAPKTVEAPEGGALVDICDEHFCPVPFSCRSAS
                     CGTCHSEIVEGIEHLAPAEPMEQELLDLLGGGPKSRLACQAEVLPGPGLIRIRSHLG"
     gene            complement(614..1060)
                     /gene="dtd"
                     /locus_tag="VLJ38_07395"
     CDS             complement(614..1060)
                     /gene="dtd"
                     /locus_tag="VLJ38_07395"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HSU39374.1"
                     /translation="MRAVVQRVTRAEVTVSGASVGRIERGLCVLVGVAAGDTEADAQS
                     LADKVVGLRVFEDEAGKMNLDVKQVGGALLCVSQFTLLGDARKGRRPSFTDAMAPEPA
                     AALFEHFVACCRATVPVETGRFRTSMLVELVNEGPVTLLLDSRRAF"
     gene            complement(1074..1415)
                     /locus_tag="VLJ38_07400"
     CDS             complement(1074..1415)
                     /locus_tag="VLJ38_07400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39375.1"
                     /translation="MPRVPTLLLFADVFFLGLALTLGSPLFALGATVPAGAVAAIACE
                     LLARDELKAAARTEPWRLDGWSVTVGTLAVLGLGLSLGPDAVGTAWLLVALIAGLGFA
                     SLPNLAPRPRA"
     gene            1454..>3131
                     /locus_tag="VLJ38_07405"
     CDS             1454..>3131
                     /locus_tag="VLJ38_07405"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39376.1"
                     /translation="MGRRDPFIGELVPSSLQAGVSYLIESRLGEGGTALAYRARRRAA
                     DGEAVVVIKVILPHIVAESDDQALTIIKKEAVALGRLNERIPPTPNVVRLIDTGSLPW
                     AWHGRTLELPWLALEYVHGGVEGSSLEKRVAYSVRHTGFAFDPIRVARALESLASGLS
                     EIHAAGIVHRDIHPGNVLCCGAAETELYKISDFGIARPAGLAATFGHAVVGTPGYAAP
                     EQFMSKFALGAHTDVFSLACVIFFMLTGESLFEINSPAMAVVAVQSADRRSVTSSPTL
                     AYELRERTAATQAIDMVLARATSFVPKERPPNARQLADSLLPWLRGDSGSKPSERWVG
                     SLDELHARDLVLEAVWLVRHPPGADRVVTDVAWNAGGQALAATTTGLEFWDGSTWADV
                     TANGAAEIGGVRFVERLDPTRWLIGTRDGQLCELSHEGVRELLRHPDPDITVTHALPD
                     FDDVAVFIGEAPERPPLVLTHLGRRWLKPLPATDAAFLTGITRIDDERFLIVGRGKDD
                     KSYAAIVKPLAWELERLPTPPGRVLLACAGRPERGIAVAVGVEGAVLTLEG"
BASE COUNT          502 a         1168 c         1018 g          443 t
ORIGIN      
        1 gcgtcctttc ccgccgtttg tcgatcctcg gtctcgtcat gcgcacgcgc cccgtctcgg
       61 acaagatcgg cgtcgtcgag cgcttccgcc gccaatcgct gcaccgcctg gccgacggca
      121 cgctgaaacc actcgtcgac agcgtgtttt cgctccgtga cgtcgccgcc gcgcacgcgc
      181 gcatggaagc gaaccagaac gtcggcaaga tcgtgctcga tatgtcgccg gcgtagccgc
      241 agagccttgg agcgcccgtc acccgaggtg cgagcggatc cgaatcaacc ccggccccgg
      301 cagcacctcg gcctgacagg cgagccgcga cttcgggccg ccgccgagca gatccaagag
      361 ctcttgctcc atcggttccg cgggcgccag gtgctcgatg ccttcgacga tctcgctgtg
      421 gcaggtgccg cagctcgccg agcggcacga gaacggcacc ggacagaagt gctcgtcgca
      481 gatgtcgacg agggcgccgc cctcgggcgc ctcgacggtc ttgggagcgc cgaagccgtt
      541 gccgagaaat tcgatcgtgg gcaaaacggt cgcggagtct tacatgcgcc gtgacctcgg
      601 gcgaggccgc gcgtcagaac gctcggcgcg aatcgagcag cagcgtcacg gggccttcgt
      661 tcacgagctc gaccagcatc gacgtacgaa accgccccgt ttcgaccgga accgtggcgc
      721 gacagcaggc gacgaagtgc tcgaacagcg cggccgcggg ctcgggcgcc atggcgtcgg
      781 tgaagctcgg gcggcggcct ttacgggcgt cgccgagcag ggtgaactgg gagacgcaga
      841 gcagcgcgcc gccaacctgc ttcacgtcga ggttcatctt gccggcttcg tcctcgaaga
      901 cgcgcagccc gacgacttta tcggccaagc tctgcgcgtc cgcttcggtg tcccccgcgg
      961 cgacgccgac gagcacgcac agcccccgct cgatacgacc gacgctcgcg cccgagaccg
     1021 tcacctcggc gcgcgtgact cgctgcacga ccgcgcgcat cccgccccgg ctatcaagcg
     1081 cgcggccgcg gggccaagtt cggcagactc gcgaagccga gcccggcgat cagcgccacg
     1141 aggagccacg ccgtcccgac cgcgtccgga ccgaggctca gaccgagccc gagcacggcg
     1201 agcgtgccga cggtgacgga ccagccgtcg agccgccatg gctccgtacg ggccgcggct
     1261 ttcagctcgt ctcgcgcaag gagctcgcag gcgatggccg cgacggctcc ggccggcacc
     1321 gtggcgccga gcgcaaagag gggcgatccg agcgtcaagg caagaccgag gaagaacacg
     1381 tccgcgaaga gcaggagggt agggacccgg ggcacgcggg cgcaccatac tttgatatgc
     1441 tcgcgctcgc acgatgggac gacgcgaccc gttcatcggc gagctcgtcc cgagcagcct
     1501 acaagccggc gtgagctacc tcatcgagtc tcggctcggg gaaggcggga cggcgctcgc
     1561 ctaccgcgcc cggcgccggg cggccgatgg cgaagcggtc gtcgttatta aggtcatcct
     1621 gccgcacatc gtcgcggaat ccgacgacca ggcgctcacc atcatcaaaa aggaggcggt
     1681 cgcgctcggc cgcttgaacg agcgcatccc gccgaccccg aacgtcgtgc gcctgatcga
     1741 cacgggcagc ctcccctggg cctggcacgg ccgcacgctc gagctgccct ggctcgcgct
     1801 cgagtacgtg catggcgggg tcgaaggctc gtcgctcgag aagcgcgtcg cgtactccgt
     1861 caggcacacg ggcttcgcgt tcgatccgat tcgcgtcgcg cgtgcgctcg agagcctcgc
     1921 gagcggactc tccgagatcc acgccgccgg catcgtccat cgcgacattc acccaggcaa
     1981 cgtgctctgc tgcggcgccg ccgagacgga gctctacaaa atctccgact tcggcatcgc
     2041 gcgtcccgcg ggcctcgcgg cgacgttcgg ccacgcggtc gtgggcacgc ccggctacgc
     2101 ggcgcccgag caattcatgt ccaaattcgc gctcggcgcg cacacggacg tgttcagcct
     2161 cgcgtgcgtc attttcttca tgctcacggg cgagtcgctg ttcgaaatca actcgcccgc
     2221 catggccgtc gtcgccgtgc aatcggccga ccgccgcagc gtcacgagct ctccgacgct
     2281 cgcgtacgag ctgcgcgagc gcacggccgc gacccaagcc atcgacatgg tgctcgcgcg
     2341 cgcgacctcg ttcgtaccga aagagcgtcc accgaacgcg cgtcagctcg ccgacagcct
     2401 gctcccgtgg ctgcgcggcg attccggcag caagcctagc gaacgctggg tcggcagcct
     2461 cgacgagctc cacgcgcgcg acctcgtgct cgaagcggtg tggctcgtgc gacacccgcc
     2521 cggcgccgac cgcgtcgtca ccgacgtggc gtggaacgct ggcgggcaag ccctcgcggc
     2581 gaccacgacg ggcctcgaat tttgggacgg ctccacctgg gcggacgtga cggcgaacgg
     2641 cgccgcggaa atcggcggcg tgcgcttcgt cgaacgcctc gaccccacgc gctggctcat
     2701 cggcacgcgc gacggacaac tctgcgagct ctcgcatgaa ggcgtccgcg agctcctgcg
     2761 ccaccctgat cccgacatca ccgtcaccca cgccctgccc gacttcgacg acgtcgccgt
     2821 cttcatcggt gaagcccccg aacgcccgcc gctcgtcctc acgcacctcg gccgccgctg
     2881 gctcaaaccg ctgcccgcga ccgacgccgc gtttctcacc ggcatcaccc gcatcgacga
     2941 cgaacgcttt ctcatcgtcg gccgcggcaa agacgacaaa agctacgccg ccatcgtcaa
     3001 acccctcgcg tgggagctcg aacgcctccc cacgccgccc ggtcgcgtcc tactcgcctg
     3061 cgccgggcgt cccgagcgcg gcattgccgt cgccgtcggc gtcgaaggcg cagtcctcac
     3121 cctcgagggt g
//
LOCUS       DATIML010000429         4839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2393702, whole genome shotgun sequence.
ACCESSION   DATIML010000429 DATIML010000000
VERSION     DATIML010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4839
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2393702"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..583
                     /locus_tag="VLJ38_07410"
     CDS             <1..583
                     /locus_tag="VLJ38_07410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39377.1"
                     /translation="ATDGGPNGNRSLTCEAATCTTNLDGHCDQGNCCGYDDTHNQCLD
                     DASVIDALKALQDAGIPTFVVGLPGTDQYAAYLDDFAEAGGVPNSGATKYYAVSQSQG
                     VQGLTDVFNTITTQLVRSCEIPLNGQPSKPSLVNVAIDCDVIPPTSADGSGWYLDDQN
                     APTEVILEGPVCDRLQTDGARRVDVIFGCTTVR"
     gene            604..1902
                     /locus_tag="VLJ38_07415"
     CDS             604..1902
                     /locus_tag="VLJ38_07415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39378.1"
                     /translation="MPRTTPLASIAATLAVAGLLIGACSSSAPDVGRSGTGGSGESSA
                     RGGSGGTGGSAQGGTSGKGASGGTSNATGGSSNGTSTGGSATGGSANATSSGGSGAYP
                     TNACEGLAMDNGGQGGDQACTGVASEAEPVAVDLFIMMDRSISMAQLVPGTDLTRWQA
                     LEQAVQDFATSTRGDDIRAGLGFFGLTGGSDDAIDCIQSRYSEPVVPIDTLDQSGPAI
                     VSAMNDMAPGGLTPTGPALAGALDYAASWAKDHPGRATGVVLVSDGYPTQCAERSLSE
                     IAAIAEQAHLNAPYVRTYVIGLDAEFNLDAIALSGGTHVAFKVDKGDISGSFSAALHN
                     VANTKLACEYALPPPPAGNQKLDLTRVQVIYSTAGDASNEEIPALSGIDACANSPNGG
                     WYYDNPSAPMSIMVCPCTCARFDAGRVDVRVGCRPAVGPR"
     gene            1946..2530
                     /locus_tag="VLJ38_07420"
     CDS             1946..2530
                     /locus_tag="VLJ38_07420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39379.1"
                     /translation="MRTFRMWLGVGVALASAVQASGCSGDSKSSGGSGGSTSNGGSSG
                     RGGRAGKAGASASSGRGGTGNGTGGTNGATGGTNGATGGTSNGSGGTGVNLCTQVTTP
                     IDEGLPCPALIYGRQCEGPNGPCVCEPDVNGGNQTLWRCFDDGQPHGGTGGQGAGGSG
                     HAGDQGASGAADATGDAGTGATAGDTGLAGTGGP"
     gene            2601..3938
                     /locus_tag="VLJ38_07425"
     CDS             2601..3938
                     /locus_tag="VLJ38_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSU39380.1"
                     /translation="MSTPEILFAALTDVGRQREHNEDNFLVDKKLGLFVVCDGMGGHA
                     AGEVASALAVRTLHEEIKREADLLTDYAGGGTGAARVSKRDILNMLEFAVNRASSRVH
                     AEAAKDEKKRGMGTTLVALLVIGHTAFIIYVGDSRIYLLREGVLEQLTEDHTVRNELI
                     KKRKMSREQVEQIAQKNAITRAVGVYEHAEPDTLVMDLLQGDRFLLCSDGLCGYFEED
                     LETLGRLLSNPNADAAARSLIDAANEQGGKDNITSVIVTVGDATARDVTRAKQLQLKR
                     ETLARMPLFRPLNDREILRVLQVTDVTAFKNGEQVMTEGATGEELFIVLSGTLRVTRG
                     GAELATLKTGDHVGEMALVRSQPRSATVVSEGPSELMVIRRTEFFEILRKEHQLAVKL
                     LWQFLGVLADRLADTSRELGAAKEELAAEDITGDIFVDDDEADRKTLILPEPH"
     gene            4073..>4839
                     /locus_tag="VLJ38_07430"
     CDS             4073..>4839
                     /locus_tag="VLJ38_07430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39381.1"
                     /translation="MSSSSAAADAGASRSAPPTALPNGCRVLGVKGVKPGAAPPPSVG
                     TRLGPLGWFELEPGVELAVKHGDTLREFELIGPGRFLACPGADETVLVASGSLTTTAG
                     AGARAGAVVTLATPLGVIEYPDAELRLEVSASKLSLAVKQGQATLVQIAKRGGAAPHP
                     ESVRAPAGHTELRGGVNAAELVGRCEELREQADSPGSAPSDATERARWAVARMQARRD
                     ARLTCEVARAATGRLAEAERSRFEAQLLGRGSSERRGA"
BASE COUNT          824 a         1658 c         1704 g          653 t
ORIGIN      
        1 cgccaccgac ggcggcccca atggcaatcg ctcgctgacg tgcgaagcgg ccacgtgcac
       61 gacgaacctc gacgggcatt gcgaccaagg taattgctgc ggctacgacg acacgcacaa
      121 ccagtgcctc gacgatgcca gcgtgatcga cgcgctcaaa gccttgcagg acgcgggcat
      181 cccgacgttc gtcgtgggct tacctggaac ggatcagtac gccgcgtacc tcgacgattt
      241 cgccgaagcg ggcggcgttc cgaacagcgg cgccacgaag tattacgccg tgtcgcagag
      301 ccagggcgtc cagggcctca cggacgtgtt caacaccatc acgacacagc tcgtgcgttc
      361 gtgcgagatc ccgctgaacg ggcagccgag caagccgagc ctcgtgaacg tcgcgattga
      421 ttgcgacgtc atcccgccga cgagcgccga tggttcgggc tggtacctgg acgatcagaa
      481 cgcgccgacc gaagtgattt tggaggggcc ggtctgcgac cgactccaaa cggacggcgc
      541 gcgacgcgtc gacgtgattt tcggctgtac caccgtgcgc tagccgagat ttcgaggagc
      601 accatgccgc gtaccactcc gctcgcttcc atcgccgcca cgctcgccgt ggcaggccta
      661 ctcattggcg cgtgcagcag tagcgcgccc gacgtaggcc gctcgggaac cggcggcagc
      721 ggcgaaagct ccgcgcgggg agggtccggc ggcacgggcg gcagcgcgca aggcggcacg
      781 agcggcaaag gcgcgtcggg cggcacgtcc aacgcaacgg gcggctcgag caacgggacg
      841 agcactggcg gctcggcgac gggcggctct gccaacgcga cgagcagcgg cggttccggc
      901 gcctacccca ccaacgcgtg cgaagggctc gccatggaca acggcgggca aggtggcgac
      961 caagcctgca ccggtgtcgc gagcgaggcc gagcccgtcg cggtcgacct gttcatcatg
     1021 atggaccgct cgatctcgat ggcgcagctc gtgcccggca cggacctgac gcgctggcaa
     1081 gcgctcgagc aagcggtgca ggatttcgcg acgtccactc gcggagacga cattcgcgcc
     1141 ggcctcggct tcttcggcct cacgggcggc agcgacgacg cgatcgattg cattcagagc
     1201 cgctactccg agcccgtcgt gcccatcgac acgctggacc aatccgggcc cgcgatcgtc
     1261 tcggccatga acgacatggc ccccggcggg ctcacaccga cgggacccgc gctcgccgga
     1321 gcgctcgact atgctgccag ctgggccaag gatcacccgg gccgcgcgac gggcgtcgta
     1381 ctcgtgagcg acggctatcc gacgcagtgc gcagagcgct ccttgtccga gatcgccgcg
     1441 atcgccgagc aggcacacct gaacgcgccg tacgtgcgca cgtacgtgat cggcctcgac
     1501 gccgagttca acctcgacgc catcgcgctc tcgggcggca cgcacgtggc gttcaaggtg
     1561 gacaagggcg acatctccgg ttcgttctcg gcggcgctcc acaacgtcgc gaacaccaag
     1621 cttgcctgcg agtacgcgct gccgcccccg cccgccggca atcagaagct cgatttgacg
     1681 cgcgtgcagg tgatctattc gacggccggc gacgcttcga acgaggaaat tcccgccctt
     1741 tcgggcatcg atgcgtgcgc gaactcgccg aacggcggct ggtattacga caacccgagc
     1801 gctccgatga gcatcatggt gtgcccgtgc acgtgcgcgc gcttcgacgc gggccgcgtt
     1861 gacgtgcgcg tcggttgccg tcctgcggtg gggccgcgct gagcgtggcc gagcgagatc
     1921 caatgcttcg atgtgcaggt gagcgatgag aaccttcaga atgtggctcg gtgtaggcgt
     1981 ggcgctcgcg agcgccgttc aagcgagcgg ctgcagcgga gattccaagt ccagcggcgg
     2041 cagcggcggt tccacgagca acggcggcag ctccggacgc ggcggtcgcg ccggaaaggc
     2101 cggggcgagc gcgagtagcg gccgcggcgg cacgggcaac ggcaccggtg gcacgaatgg
     2161 cgcgacgggc ggcacgaatg gcgcgacggg cggcacgagc aacggcagcg gcggcaccgg
     2221 cgtgaacctg tgcactcagg tgacgacgcc catcgacgag ggcctcccct gcccggctct
     2281 catttacggg cgccaatgcg agggaccgaa cggcccctgc gtctgcgagc cggacgtgaa
     2341 cggcggaaac caaacgctct ggcgctgctt cgacgacggg cagccgcacg gcggcacggg
     2401 cggacagggc gcgggaggct ccggccacgc cggcgaccag ggcgcctcgg gggcggcgga
     2461 cgcgacgggc gacgccggca cgggtgcgac agcaggcgac accgggctcg ccggcacggg
     2521 cggcccgtaa agccgccgaa ttgccggcgg tcgacctcgc ttggaggcgc ggccgatcct
     2581 cgcctatcct ggttcgctcg atgagcacgc cggagatcct gttcgcggca ctgacggacg
     2641 tggggcgcca gcgtgagcac aacgaggaca acttcctcgt cgacaagaag ctcgggctct
     2701 tcgtcgtctg cgacggcatg ggcgggcacg ccgccggcga agtggcgagc gccctcgccg
     2761 tgcgcacgtt gcacgaagag atcaagcgcg aggccgacct cctgacggac tacgcgggcg
     2821 gtggtaccgg cgcggcgcgc gtgagcaagc gcgacatcct gaacatgctc gagttcgccg
     2881 tgaaccgcgc ctcctcgcgc gtgcacgccg aagccgcgaa ggacgaaaag aagcgcggca
     2941 tgggcacgac gctcgtcgcg ctgctcgtga tcggccacac cgcgttcatc atctacgtcg
     3001 gcgacagtcg catctacctc ttgcgcgaag gggtgctcga gcagctcacg gaggaccaca
     3061 ccgtgcgcaa cgagctcatc aagaagcgga agatgtcgcg cgaacaggtc gagcagatcg
     3121 cgcaaaagaa cgcgatcacg cgcgccgtcg gcgtctacga gcacgccgag cccgacacgc
     3181 tcgtgatgga tctgttgcag ggcgaccgct tccttttgtg ctcggacgga ctctgcggct
     3241 atttcgagga agatctcgaa acgctcggcc gcctgctgtc gaacccgaac gccgacgctg
     3301 cggcgcgcag cctgatcgac gccgccaacg agcagggcgg taaagacaac atcacctccg
     3361 tgatcgtgac ggtgggcgac gcgacggccc gcgacgtaac gcgcgccaag cagctccagc
     3421 tcaagcgcga gacgctggcg cgcatgccgc tctttcgccc gctcaacgac cgcgaaattc
     3481 tgcgcgtcct gcaggtgacc gacgtgaccg cgttcaagaa cggcgagcag gtcatgaccg
     3541 agggcgcgac gggcgaagag ctcttcatcg tgctctcggg cacgctgcgc gtcacgcgcg
     3601 gcggcgccga gctcgcgacg ctcaagaccg gcgaccacgt cggcgaaatg gcgctcgtgc
     3661 gcagccagcc gcgctcggcg accgtcgtga gcgaagggcc gagcgagctc atggtcattc
     3721 gccgcacgga gttcttcgaa atcctgcgca aggaacacca gctcgcggtc aagctcctct
     3781 ggcaattcct gggtgtgctc gccgaccgtc tcgccgacac gagccgcgag ctcggcgccg
     3841 ccaaagaaga gctcgccgcc gaagacatca cgggcgacat cttcgtggac gacgacgagg
     3901 ccgaccgcaa gacgctgatc ttgccggaac cgcattgaag ctcggggcgc ggcctccgct
     3961 ctccaccctc gtattcgccg cgtgcctctg cgttggcgcg tgtcagcggc gggagagcgc
     4021 cccgcgtgcc gccgcgagct cgacggcgag cgctggttcg cctgaggccg ccgtgtcctc
     4081 gagcagcgct gcagccgatg cgggcgcgag ccgcagcgcg ccgcccacgg ctttgccgaa
     4141 cggctgccgc gtgctcggcg tgaaaggcgt gaagccggga gcggcgccgc cgccgagcgt
     4201 ggggacgcgg ctcggcccgc tcggctggtt cgagctcgaa cccggcgtcg agctcgcggt
     4261 caagcacggg gatacgctgc gcgagttcga gctcatcggg cccgggcgtt tcctcgcttg
     4321 tcccggggcc gacgagacgg tgctcgtcgc gagcggctcg ctcacgacga cggcgggagc
     4381 gggcgcgcgc gcgggagcgg tcgtgacgct cgcgacgccg ctcggcgtca tcgaataccc
     4441 ggacgccgag ctccggctcg aggtcagcgc gagcaaactt tcactcgccg tcaagcaggg
     4501 acaggcgacg ctcgtccaaa tcgcgaagcg cggcggagcg gcaccccatc ccgagtccgt
     4561 gcgcgcgccg gccggccaca ccgagcttcg tggaggagtg aacgcggccg agctcgtcgg
     4621 gcgctgtgaa gagcttcgcg agcaagccga ctcgcctggt tccgcgccga gcgacgcgac
     4681 ggagcgagct cgctgggccg tcgctcgcat gcaagcacgc agagacgcgc gcctcacttg
     4741 cgaggttgca cgtgcggcga cgggacggct cgccgaggcc gaacgcagcc gtttcgaagc
     4801 ccagctgctc ggccgagggt cgagcgagcg ccgcggagc
//
LOCUS       DATIML010000430         5960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4996119, whole genome shotgun sequence.
ACCESSION   DATIML010000430 DATIML010000000
VERSION     DATIML010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5960
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4996119"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="VLJ38_07435"
     CDS             <1..588
                     /locus_tag="VLJ38_07435"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSU39382.1"
                     /translation="TGTYSGSQRAVYEVVLASQRAAIDAVRPGARYRDVHRIAGKQLL
                     EGLVALGLFRGDVEELYARGAAALFFPHGIGHLLGLDVHDLEDLGDRAGYAPGRERSQ
                     NFGDRYLRLDRDLVPGMVVTIEPGYYRIPYLLDRPEEVGELESALDRRVLAELADVRG
                     IRIEDDVLVTDTGAEVLTASIPKAPSDVEAAVRGA"
     gene            863..1309
                     /locus_tag="VLJ38_07440"
     CDS             863..1309
                     /locus_tag="VLJ38_07440"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39383.1"
                     /translation="MHWSEEGPTVPGLSPELRVLLAEDDVEMRELLVEVLNEAGCSVT
                     VARDGTEMLGDLLQAALRQFPEEPFDLLITDQLMPGCTGLEALARLRSVGYAMPALLI
                     TAFPDADTRVRANRLQALVLAKPFALTELQDAVDQVTVLGGEAAGA"
     gene            complement(1306..2532)
                     /locus_tag="VLJ38_07445"
     CDS             complement(1306..2532)
                     /locus_tag="VLJ38_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HSU39384.1"
                     /translation="MLCGVDQLLAGPLSTLRRRIRSSRVGLLTHAASIDRRGRPTRDV
                     LEELGVSLRVLFAPEHGLDADAQAEVPVGDVDRTEGDASLPPVVSLYGKTREDLVPRP
                     EHLAELDLLVIDLADVGARYYTYVWTALLAARAARAANVHTVVLDRPNPISGDPATIE
                     GAPQEPGFLSFVGLEPLPIRHALTLGEILAACFERDGHPLGADGALSVAPVLGWERYR
                     TALAWGRPFVMPSPNMPSLETALVYPGGCLVEGTNLSEGRGTTAPFQIVGAPFLDGPA
                     LAKSLTEAGVPGALVRPVTFRPTFEKHAGERCHGVMLHVSNAELFRPVATYLSLIALA
                     RAQAPERFEFRTSPYEFETTIPAFDLLTGSAKAREALLAGAPPEEVVLAVAPVDGSWR
                     EQVFEAEARVAKAVSA"
     gene            2629..3990
                     /locus_tag="VLJ38_07450"
     CDS             2629..3990
                     /locus_tag="VLJ38_07450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU39385.1"
                     /translation="MRRVLVVDDEENLRVVLRTLLRRHGYEVETAPSGDEALTLVDSF
                     GPDVVLTDVRMPKMGGLDLLATLKAKGNEATVIVMSAYGNMDLAIEAMKAGAYDYVQK
                     PFKPDEVVLALRKAEERESLRRENRVLRDEIRKEHRFEDILAKSGKMQDIFRTIAKIA
                     EYKTTVLVTGESGAGKELVARAIHRRSKRTGPFVAVNCGAIPENLLESELFGHKKGAF
                     TDAVQDRKGLFEEANGGSLFLDEIGELPLALQVKLLRVLEDEKIRRLGETRDLQVDVR
                     IITATHRDLSAETKAGRFREDLFYRLNVLLIHCPALRDRREDIPLLIEHFLARNNARL
                     GTSIRGLDTEARRLLYEYAWPGNVRELENTIERAMVLTEGDMITAADLPERVREARDP
                     VQMQLASGELSVKKTMRIIEEILIRRALQKTKGNRTRAAEVLEISHRALLYKIKDYQI
                     TDL"
     gene            4261..4440
                     /locus_tag="VLJ38_07455"
     CDS             4261..4440
                     /locus_tag="VLJ38_07455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39386.1"
                     /translation="MLFIFITLLGVALLSPIVALRFAIARWFVPATIAAREEAAGGSR
                     ETTHLRPRLALSWID"
     gene            4482..4901
                     /locus_tag="VLJ38_07460"
     CDS             4482..4901
                     /locus_tag="VLJ38_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HSU39387.1"
                     /translation="MPVAFTPLVGGVLIGAAALVLWFGNGRTAGVSGIVGGILRPRHG
                     DVGWRIAFVAGLVLAGFVGSALARQSIAPSPRPVAWLAFAGLLVGVGTRLGAGCTSGH
                     GVCGVARGSPRSFVATATFVATGMLTVTLLRLWGTGR"
     gene            4898..5377
                     /locus_tag="VLJ38_07465"
     CDS             4898..5377
                     /locus_tag="VLJ38_07465"
                     /inference="COORDINATES: protein motif:HMM:NF042761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="HSU39388.1"
                     /translation="MRHARSRLLVAFVCGLVFGAGLLLSGMTRPAKVLAFLDPLGAWD
                     PSLALVMVGAVTTYAVGIRWGDSWHRRQAPLAAPAFSVPPVRRVDTALLVGAAIFGVG
                     WGVGGYCPGPSLVAVASGGIGVLAFVGCMLLGSLAAALLERPPQPSRARRDNEALQS"
     gene            5475..>5960
                     /locus_tag="VLJ38_07470"
     CDS             5475..>5960
                     /locus_tag="VLJ38_07470"
                     /inference="COORDINATES: protein motif:HMM:NF024835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU39389.1"
                     /translation="MRTKAAPGDEVGAAELARRVAEALRGFRRDRHLSLDDLSARSGV
                     SRAALSQIEGGRTNPTLAVLWKIAVGLEVPFHDLLGSSSEQSVRVLRAGDAIPLRSSD
                     GRTESRLLSPGGSSSDTEVYELRLVPKAVHKSDPHAQGTRETLVVLTGALRLGAGAEA
                     HE"
BASE COUNT          941 a         1920 c         2131 g          968 t
ORIGIN      
        1 acgggcacgt actcgggcag ccagcgcgcc gtgtacgagg tcgtgctcgc gtcacagcgc
       61 gccgccatcg acgccgtgcg tcccggcgcg cgctatcggg acgtgcaccg catcgcgggc
      121 aagcagctgc tcgaggggct cgtcgcgctc ggcttgttcc gcggcgacgt cgaggagctc
      181 tacgcgcgcg gcgcggcggc gttgttcttc ccccacggca tcggccacct gctcgggctc
      241 gacgtgcacg atctcgagga tctgggcgat cgcgcaggtt acgcgcccgg gcgcgagcgc
      301 agccaaaatt tcggggatcg ctacttgcgg ctcgatcgcg acctcgtgcc cggcatggtc
      361 gtgacgatcg aacccggtta ctaccggatc ccttatctgc tcgaccgtcc cgaagaggtg
      421 ggcgagctcg agtcggcgct cgatcgccgt gtcctcgccg agctcgccga cgtgcgcggg
      481 atccgcatcg aggacgacgt gctcgtcacg gacacgggtg ccgaggtgct cacggcgagc
      541 atccccaagg cgccgagcga cgtcgaagcc gccgtgcgcg gagcgtgacg acggcgtcga
      601 cgcgatgtgt gcagcgcgcg gcgggtgtcg gcgcatgtcc gcgcatgtct gcgcatgtcc
      661 gaagtggcga tacgcggcgg tgaggcgagt ggagttgcaa aatcgcacgg cggtccagca
      721 tcgcaaacgc gacctggcgt cccacgaccg ttccggcgcg cctgcgcccg ccaggacgcc
      781 cgggatcatc gcggcacgtg cgttgcaata gtttgccgcg atggtcgagc tcgaagggaa
      841 gcggggacgt ttggaaacac cagtgcattg gtccgaggag ggcccgaccg taccggggct
      901 gtcgccggag ttacgcgtgc tgcttgccga ggacgacgtg gagatgcgtg agctactcgt
      961 cgaggtgttg aacgaagccg gttgcagcgt gaccgttgcg cgcgacggca cggagatgct
     1021 cggcgatctg ctgcaagcgg cattgcgcca atttcccgag gaaccgttcg acttgctcat
     1081 cacggaccag ctgatgcccg gctgcacggg gctcgaggcg ctcgcgcggc tccgcagcgt
     1141 cggttacgcg atgccggcgc tcttgatcac ggcgttcccc gacgcagaca cgcgagtgcg
     1201 cgcgaatcga ctgcaagcac tggtcttggc caagcccttc gctctgacgg agctccagga
     1261 cgcggtggac caggtgacgg tcctgggggg cgaagccgcc ggcgcttagg cgctgactgc
     1321 ttttgccacg cgcgcttccg cctcgaacac ctgctcgcgc cagctgccgt cgacgggcgc
     1381 cacggccaag accacttctt cgggtggtgc gcccgcgagc agcgcttcgc gcgccttggc
     1441 cgagcccgtg agcagatcga aggccgggat cgtcgtctcg aactcgtagg gggacgtgcg
     1501 gaactcgaag cgttcgggtg cttgcgcgcg cgcgagcgcg atgagcgaga ggtaggtcgc
     1561 gacgggtcgg aagagctccg cgttcgacac gtggagcatg acgccgtggc agcgttcgcc
     1621 cgcgtgcttc tcgaaggttg ggcggaacgt gacaggccgc acgagcgcgc ccggcacgcc
     1681 tgcttccgtg aggcttttcg cgagcgcggg gccgtcgagg aagggcgcgc cgacgatttg
     1741 gaacggcgcc gtcgtgccgc gtccctccga caggttcgtg ccctcgacga gacagccgcc
     1801 cgggtagacg agcgccgtct cgagtgaggg catgttgggg ctcggcatga cgaacggacg
     1861 gccccacgcg agcgccgtgc gatagcgttc ccaaccgagc acgggcgcga ccgacagcgc
     1921 gccatcggcg ccgagcgggt ggccgtcgcg ttcgaagcac gccgccaaaa tttcaccgag
     1981 cgtgagcgcg tgacgaatcg gcagcggctc gagacccacg aacgagagga agcccggctc
     2041 ttgcggcgcg ccctcgatcg tcgcagggtc gcccgagatc gggttcgggc ggtcgagcac
     2101 caccgtgtgc acgttcgcgg cgcgtgccgc gcgagcggcg agcagcgccg tccagacgta
     2161 cgtgtagtag cgcgctccca cgtcggcgag atcgatcacg agcagatcga gctcagccag
     2221 gtgctcgggg cgcgggacga gatcctcgcg ggtcttgccg taaagactca cgacgggcgg
     2281 cagggacgcg tcaccctcgg tgcggtcgac gtcacccacg ggaacttcgg cttgcgcgtc
     2341 cgcgtcgagc ccgtgctcgg gcgcgaacag cacgcgcagc gagacgccga gctcttcgag
     2401 cacgtcgcgc gtcgggcgac cgcgccgatc gatgctcgcg gcgtgagtga ggagtccgac
     2461 gcgcgagctt cgaatccggc gccggagggt cgaaagcggt cctgccagta gctgatcgac
     2521 tccgcaaagc atgaggcctc cgccgtagca cgtgtaacca ccggaaatca cgcgtcggct
     2581 cggaaatgat tgcgggacag gcggccggcg ggtagcattt ttttcacagt gcgccgcgtt
     2641 ctggtcgtag atgacgaaga gaacctgagg gtggttctgc gcaccttgct gcgccgccac
     2701 ggctatgagg tggagacggc gccgagcgga gacgaggcgc tcacgctggt cgattcgttc
     2761 gggccggacg tggtgctcac ggacgtgcgc atgccgaaga tgggcggcct cgacttgctc
     2821 gcgacgctca aggcgaaggg caacgaggcg acggtgatcg tgatgagcgc ctacggaaac
     2881 atggatctcg cgatcgaggc catgaaggca ggcgcttacg actacgtgca gaagccgttc
     2941 aagccggacg aggtcgtgct cgcgctacgc aaggccgagg agcgcgaatc gctccggcgc
     3001 gagaaccgcg tgctgcgcga cgagatcagg aaagagcacc gcttcgagga catcctcgcc
     3061 aagagcggga agatgcagga catcttccgc acgatcgcca agatcgccga gtacaagacc
     3121 acggtgctcg tcacgggcga gagcggcgcg ggcaaggagc tcgtggcgcg cgccatccac
     3181 cggcgcagca agcgtacggg tcccttcgtc gccgtcaact gcggcgccat ccccgagaac
     3241 ctgctcgaga gcgagctctt cgggcacaag aaaggcgcct tcaccgacgc ggtgcaagat
     3301 cgcaagggct tgttcgagga ggccaacggc ggctcgctct ttctcgatga aatcggcgaa
     3361 ttaccactcg cgctgcaggt gaagctcttg cgcgtgctcg aggacgaaaa gattcgtcgt
     3421 ctgggcgaga cgcgcgacct gcaggtggac gtacgcatca tcaccgccac gcaccgcgat
     3481 ctttcggccg agaccaaggc aggtcgcttc cgcgaagatc tcttctaccg gctgaacgtg
     3541 ctcttgattc attgtccggc gctgcgcgac cggcgtgagg acattccgct cctcatcgag
     3601 cactttctcg cgcgcaacaa cgcgcggctc ggcacgagta tccgcggcct cgacaccgag
     3661 gcccgccggc tgctctacga atacgcgtgg cccggcaacg tgcgcgagct cgagaacacg
     3721 atcgagcgcg ctatggtgct caccgaaggt gacatgatca cggctgccga cctgcccgag
     3781 cgcgtccgcg aggcgcgcga ccccgtgcag atgcagctcg cgagcggcga gctcagcgtg
     3841 aagaagacga tgcgcatcat cgaggagatc ctcatccgtc gcgcgctgca aaagaccaag
     3901 ggcaaccgca cgcgcgccgc cgaggtcctc gaaattagcc atcgcgcgct gctctacaag
     3961 atcaaggact accagatcac cgatctgtga ctcgggtgtg gtccagagct cgacggctgc
     4021 gatcaggccg agcagcgcgg cggcccgagg gagtgaaccg ccaaggcgca gagagcggga
     4081 agatctgaga ggtgagccca ggcatgctgg agtcatttaa tctctcgaac tcggccttcg
     4141 tggcgtcttg gcggtaatcc gggtgtggtg gaccgagtgt ctttttaagt ggacacgagg
     4201 gccctgcagc gtcatgcttc gaatcgacgg cagcctgccg tcgaggtgct tgccgtcgtg
     4261 atgctattca ttttcataac actgctgggt gtggcgctgt tgtcgccgat cgtggcgcta
     4321 aggttcgcga tcgcgcgctg gttcgtgccg gcgaccatcg ccgccaggga agaagccgcg
     4381 ggcggcagtc gcgagacgac tcacttgcgg ccacggctgg cgctctcgtg gatcgactga
     4441 gtgcctttga caacgtagag cggcgcggta cgtaagcggg gatgcccgtc gcgttcacgc
     4501 ccttggtggg gggcgttctg atcggtgctg cagcgctcgt gctgtggttc ggcaacggac
     4561 gcaccgcggg cgtcagcggc atcgtcggcg gcatcttgcg gccgcggcac ggtgacgttg
     4621 gctggcgcat cgcgttcgtc gcggggctcg tgctggcggg tttcgtcggt tcggcgctcg
     4681 ctcgccagag catcgcgccg tcgccgcgtc cggtagcctg gctcgcgttc gcggggttgc
     4741 tcgtcggcgt gggtacgcgg ctcggcgccg gctgcacgag cggccacggc gtgtgcggtg
     4801 tcgcgcgcgg ttctccgcgc tcgttcgtgg cgacggcgac cttcgtcgca acgggcatgc
     4861 tgacggtgac actgctgcgg ctatggggga cgggacgttg aggcacgcgc ggtcccgcct
     4921 gctcgtcgcg ttcgtttgcg gtctcgtgtt cggcgcgggc ctgctcctga gcggtatgac
     4981 gcggcccgcg aaagtgctgg ctttcctgga tccgctcgga gcgtgggatc cctcgctcgc
     5041 cctcgtcatg gtgggcgccg tcacgactta tgccgtcggt attcgttggg gggattcctg
     5101 gcatcgccgg caggcgccgc ttgcagcccc tgcgttctcg gttccccccg tgcggcgggt
     5161 cgatacggcg ctactcgtgg gcgcggccat tttcggcgtg ggctgggggg ttggcgggta
     5221 ttgtccgggt ccgagcctcg tagcggtcgc ctcgggtggg attggcgtgc tcgcgttcgt
     5281 cggctgcatg ttgctcggta gccttgcggc cgcgctgctc gagcgccccc cgcagccctc
     5341 gcgagcgcgc cgcgacaacg aagccttgca gagctgacct ctgacggtcc ttccgtgata
     5401 acaaatgcgg cgacatgccg cagacagcca gaaaggctcc gcagccgacc ccgaaggcga
     5461 gcaaaaccgc acgagtgcgc accaaggctg cccccggcga cgaagtgggc gccgccgagc
     5521 tcgcgcgccg cgtggcggaa gcgctgcgtg gcttccggcg cgaccggcac ctgtcgctcg
     5581 acgacctctc ggcgcggagc ggcgtgagcc gcgcggcgct ctcgcaaatc gaaggcggtc
     5641 ggaccaatcc gacgctcgcc gtgctgtgga agatcgcggt cgggctcgag gtgccatttc
     5701 acgatctgtt ggggagctcg tcggagcaga gcgtgcgcgt actgcgcgcc ggcgacgcca
     5761 ttccgctgcg aagcagcgac ggccgcacgg agagccggct cttgtctccc ggcggttcga
     5821 gcagcgacac cgaggtgtac gagctccggc tcgtgccaaa agccgtgcac aagagcgacc
     5881 cgcacgcgca gggcacgcgc gaaacgctcg tcgtgctcac gggcgcgctc cgtctcggcg
     5941 ccggcgccga agctcacgag
//
LOCUS       DATIML010000431         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4708381, whole genome shotgun sequence.
ACCESSION   DATIML010000431 DATIML010000000
VERSION     DATIML010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4708381"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VLJ38_07475"
     CDS             <1..185
                     /locus_tag="VLJ38_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39390.1"
                     /translation="NKLRVMLDWTLDLFVERSSSQIHATREQLEAHALHDDAPRPSDT
                     PRPLPAGLVPALSAPS"
     gene            182..874
                     /locus_tag="VLJ38_07480"
     CDS             182..874
                     /locus_tag="VLJ38_07480"
                     /inference="COORDINATES: protein motif:HMM:NF018264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrsF family protein"
                     /protein_id="HSU39391.1"
                     /translation="MTEHEPELPDFESIPDPGAKSAPLPPRPRPVLSSRGPTRRDLTH
                     GRRIALLVSAGWIGAQLAASGLRGDLARVPLGYTFGFAVVPVVAGLVCLIAATTPGRL
                     GLGARVTVLATLALALPATFAVVSYVFSPPYAGAPAGEFKYGVLCFNVALAWTLLPLI
                     AAGIALRGTFVTRATLRSALVGAAAGLVVSATSMLRCPLSDSWHMALSHGGAVIAAAL
                     FGATVLARVTRV"
     gene            complement(915..>1614)
                     /locus_tag="VLJ38_07485"
     CDS             complement(915..>1614)
                     /locus_tag="VLJ38_07485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39392.1"
                     /translation="GDDAARATDDGRLSPFTMGTVVPRAHAGVTALGGYDSAAGSART
                     VTSAEARALTFLAFRVEYEHGPATGSDDRVTLGARVALLRQAAHGIDLGAGFFFQPKD
                     FRGEGNFVGAVLLGRNFGRWGLFCNGLVGLDSEGDDGSAELRLSSMYRVSKLLHVGFD
                     ARGRYNFSDDEKRFSAQQVNWEIQAGPLASLTLGPVALLAIVGPSALHLTQPNLDERT
                     ALGVLAMAGAGAAF"
BASE COUNT          223 a          593 c          541 g          257 t
ORIGIN      
        1 ggaacaaact ccgcgtcatg ctcgattgga cgctcgattt gttcgtcgaa cgctcgagct
       61 cccaaatcca cgcaacgcgc gagcaactcg aggcacacgc ccttcacgac gatgctcccc
      121 ggccgtcgga cactccgcgg cccctgcccg ccggcttggt gccggcactg tcggcgccat
      181 cgtgaccgaa cacgaacccg agctccccga cttcgagagc attcccgatc ctggcgcgaa
      241 atcggcacca ctgccgccgc gtccaagacc cgtgctctcg tcgcgcggac cgacgcgccg
      301 tgacctgacg cacgggcgcc gcattgcgct cctggtcagc gccggctgga tcggcgcgca
      361 gctcgcggcg tccggcttgc gcggcgacct cgctcgcgtg ccgctcggct acaccttcgg
      421 cttcgcggtc gtaccggtcg tcgccgggct cgtgtgtctc atcgcagcga cgactccggg
      481 tcggctcggg ctcggcgctc gcgtcaccgt gctcgcgacg ctcgcgctcg cgctgcccgc
      541 gacgttcgcc gtcgtgagct atgtcttctc gcccccttat gcgggagcgc cggccggtga
      601 gttcaaatac ggggttctct gcttcaacgt cgcgctcgcc tggacgctcc tgccgctgat
      661 tgccgcaggc atcgccttgc gcggcacgtt cgtgacgcgc gctacgctgc gcagcgcgct
      721 tgtcggcgcg gccgcaggcc tggtcgtttc ggcgactagc atgctgcgtt gcccgctttc
      781 ggactcgtgg cacatggcgc tgagccacgg cggggccgtc atcgccgccg cgctcttcgg
      841 cgcgaccgtg ctcgcgcgcg tcacgcgggt gtgagcgcct tccgattgcg gcgaggcacc
      901 agcgccgcgc ctcgtcagaa cgccgccccg gcacccgcca tggcgaggac cccgagcgcc
      961 gtgcgctcgt ccaagttcgg ctgtgtcagg tgcagcgcgc tcggcccgac gatggcgagc
     1021 aacgcgacgg gaccgagcgt cagcgacgcg agcggcccgg cttggatttc ccaattgacc
     1081 tgctgcgccg aaaagcgctt ctcgtcgtcc gagaagttgt agcgcccgcg tgcgtcgaag
     1141 ccgacgtgca ggagcttgct cacgcggtac atgctcgaga gccggagctc ggcagagccg
     1201 tcgtcgcctt cggagtcgag cccgacgaga ccgttgcaga agaggcccca ccggccgaaa
     1261 ttgcggccca ggaggacggc gcccacgaaa ttgccttcgc cgcgaaagtc ctttggttga
     1321 aagaagaagc ccgctccgag atcgatgccg tgagccgcct ggcgcaagag ggcgacacgc
     1381 gcgccgagcg tgacgcgatc gtcgctgccc gtggccggtc cgtgttcgta ttcgacgcga
     1441 aacgccaaga acgtcagcgc gcgcgcctcg gcggacgtga cggtgcgcgc agagccggcc
     1501 gcgctatcgt aaccgccgag cgccgtgacg ccggcgtgcg ctcgcggcac gacggtgccc
     1561 atcgtgaacg gcgagagccg cccgtcgtcc gtggcgcgcg ccgcgtcgtc gccc
//
LOCUS       DATIML010000432         3801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2973049, whole genome shotgun sequence.
ACCESSION   DATIML010000432 DATIML010000000
VERSION     DATIML010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3801
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2973049"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1283
                     /locus_tag="VLJ38_07490"
     CDS             159..1283
                     /locus_tag="VLJ38_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HSU39393.1"
                     /translation="MHRRSVLGALVSVPLLEACKSESAAPGTPAQGARESETPVVLGL
                     EPLGFQWRTLDPFLFCAHHADGYPAGNASLGPATSLAGRELGQDFSQRDGFSMYHGQI
                     VPGFPEHPHRGFETVTIVREGLVDHADSLGAAARYGHGDVQWLTAGSGIVHAEMFPLL
                     NPSAGNPLELFQIWLNLPSQSKFVAPHFSMLWRDMIPRTVVRDGAGRGTELAIIAGAL
                     GDVHAAAPPPHSYAARSGSDIAIWTLKLEPRAEFRLPPAAAGNRRMLYFFRGSALAVA
                     GRAVDARHSVELRADASATLVNGPEPSEILLLQGRPLGEPVVQHGPFVMNTQAEIRQA
                     YADYRATGFGGWPWPRADPVLGADPARFARHADGRVERAS"
     gene            complement(1284..1499)
                     /locus_tag="VLJ38_07495"
     CDS             complement(1284..1499)
                     /locus_tag="VLJ38_07495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39394.1"
                     /translation="MTPIQPDDDPVLARLASLRSEAPGRELSAKIRAASLARLRPRPL
                     HLGWTLLVAASTLGYLVGAVSFTLGLY"
     gene            complement(1496..2035)
                     /locus_tag="VLJ38_07500"
     CDS             complement(1496..2035)
                     /locus_tag="VLJ38_07500"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39395.1"
                     /translation="MISLLRRRDPRGFDRAYAAYSGPLLGFLVRLTGRRDLAEDLLQH
                     VFLRLAERGPELRVDSDLRAWLFAVARNGAVSELRRTPELADEAALEALADPPPDMEA
                     RLLLGDVERALAMLRFEDREVLLLLGVEGLERDAVARLLGVRPDALRQRLARARSRLL
                     AELERARVELSPRPRKVVP"
     gene            2170..2493
                     /locus_tag="VLJ38_07505"
     CDS             2170..2493
                     /locus_tag="VLJ38_07505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39396.1"
                     /translation="MFFLLAFGVATLIAASVYAVRVTRAAFRMTLGLGAATGGATLGG
                     ICVDLATVGHQVPAYVQKHPGVSLAEAVLQGLAESLAPGVLGFTFLSLAALIMTLGFY
                     REPTA"
     gene            complement(2456..>3801)
                     /locus_tag="VLJ38_07510"
     CDS             complement(2456..>3801)
                     /locus_tag="VLJ38_07510"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSU39397.1"
                     /translation="ELRHTRELVRDNPTQAARAAELGRSVADKLTFAARLVEARDHDD
                     IAGADAMVGSLQNKLLMDRVRGTVARMSAEEEHLLDERRAAANATQLDTVLAIGALAF
                     CLLGLLAFSFVNMQRDANELEAAARELAESEERYRLLVNNVSDLVLLHDSDGKLVYVS
                     PSLETLLGYSLERASALELRSVVHPDEVEFVEGQLSRFRAGAATSAVVTCRLCRNDGE
                     YRWFEFKVAAVNDETGSVRHFQSAGRDVTARRELEQRLAEQAEELRQLSFRDGLTGLY
                     NRRGFLELSQQVVRVAERQKHRLAALFIDLDGLKGINDGLGHERGDRAIGEAADLLRS
                     TCRATDLIARLGGDEFVVLASDVDEAAVAALTARLEHALVEANRKSNRDYQLSFSFGV
                     ASFDPLAPVPMEKLLVEADARMYEAKMRRRRARASSAAFRVSRFTPSAPDKNQAS"
BASE COUNT          600 a         1301 c         1314 g          586 t
ORIGIN      
        1 ggccctgctc ggctggtcgg gtcgcacgat gcgggaaatg gtgctcgaca cggccaagtc
       61 gatcgcggcc cgaaaggcgc ggacgcccgg cgcgtaaagg ggcgcgcaaa ctcgcgggcg
      121 ccgccccgag gcggctccag cgctatactc gaggcctcat gcatcgtcgt agcgtgctcg
      181 gagccctcgt cagtgtcccg ctactcgagg catgcaagag cgaaagtgcg gcgccgggca
      241 cgccggcgca gggcgcgcgc gaatcggaaa cacccgtcgt gctcggcctc gagccgctcg
      301 gattccaatg gcgcacgctc gacccgttct tgttctgcgc gcatcacgct gacggctacc
      361 ccgcgggcaa cgcgtcgctc ggacctgcca cctcacttgc cgggcgcgag ctcgggcagg
      421 atttttccca gcgtgacggc ttcagcatgt atcacgggca aatcgtgccg ggcttccccg
      481 agcacccgca ccgcggcttc gagacggtga cgatcgtacg agaagggttg gtcgatcacg
      541 ctgactcgct cggcgccgcc gcccgctacg gccatggcga cgtgcagtgg ctcacggccg
      601 gcagcggcat cgtgcacgcg gaaatgttcc cgctcctcaa tccgtcggca ggcaatcctc
      661 tcgagctctt tcagatctgg ctcaacttac cgagccaaag caagttcgtc gcgccgcatt
      721 tttcgatgct ctggcgcgac atgatcccgc gcaccgtcgt ccgcgacgga gcgggacggg
      781 ggaccgagct cgcgatcatc gccggcgcgc tcggggacgt gcacgcggcc gctccgccgc
      841 ctcattcgta cgccgcgcgc agcgggtcgg acatcgccat ttggacgctc aagctcgagc
      901 ctcgcgccga gtttcgcctg ccgcccgccg ccgccggcaa tcgccgcatg ctgtatttct
      961 tccgtggctc ggcgctggcg gtcgcggggc gcgccgtcga cgcccggcac tcggtcgagc
     1021 tccgcgcgga cgcgagtgcc acgctcgtga acgggcccga gccgagcgaa atactgctac
     1081 tgcaaggccg cccgctcggc gagccggtcg tgcagcatgg gccgttcgtg atgaacacgc
     1141 aggcagagat tcggcaggcg tacgcggact accgcgcgac cggtttcggc ggctggccgt
     1201 ggccgcgcgc cgatcccgtg ctgggcgccg atccggcgcg tttcgctcgg catgccgacg
     1261 ggcgggtgga gcgcgcgagc tgatcagtac aggccgagcg tgaacgaaac cgcgccgacg
     1321 agataaccga gcgtcgaagc cgcaacgagc agcgtccagc cgagatgcag cgggcgaggc
     1381 cggagccgcg cgagcgaggc cgcgcggatt tttgcggaga gttcgcgtcc gggagcttca
     1441 ctccggagcg aagcgaggcg cgcgagcacg ggatcgtcgt ctggctgaat cggcgtcatg
     1501 gtaccacctt ccgcgggcga ggactgagct ctaccctggc gcgctcgagc tcggcgagca
     1561 ggcgcgaccg agcgcgagcg aggcgctgcc gcaacgcgtc gggccgaacg ccgagcagcc
     1621 gcgcaacggc gtcgcgctcg aggccctcga cgccgaggag caagagcact tcgcgatcct
     1681 cgaagcggag catggcgagc gcccgctcga cgtcacccaa gagcaggcgc gcctccatgt
     1741 ccggcggtgg atcggccagc gcctcgagcg ccgcctcgtc cgcgagctcg ggcgtgcgcc
     1801 gtagctcgct gacggcgcca ttgcgcgcga cggcaaagag ccaggcgcgc aggtccgaat
     1861 cgacccgcag ctccggcccg cgctcagcga gtcgcaaaaa cacgtgctgc agcaagtctt
     1921 cggcgaggtc acgacgaccg gtgagtcgga ccaaaaagcc gagcagcggc ccagagtagg
     1981 cggcgtaggc gcgatcgaag ccgcgcggat cacggcgccg caacagcgaa atcacgtccg
     2041 aatcgcctgg cgccgtcact gccccacggt aacgcacgag cgggggcgcg cgtgacagct
     2101 gtcacgactc ggcgtgcgcg acgtttaccc gtcatggtgc agcgtttttt tgccgagggt
     2161 ggattcgcca tgtttttcct gctcgcattc ggcgtcgcca cgctgatcgc ggcgagcgtc
     2221 tacgccgtgc gagtgacccg ggctgctttc cggatgacgc tcgggctcgg cgctgcgacg
     2281 gggggcgcga ccctcggcgg catctgcgtc gatttggcca ccgtcgggca ccaagtgccg
     2341 gcgtacgtgc agaagcatcc gggcgtctcg ctggcggaag ccgtgctcca gggcttggcg
     2401 gagtcactcg ctccgggcgt gctcggcttc acgtttcttt cgctcgccgc gctgatcatg
     2461 acgcttggtt tttatcggga gccgacggcg tgaaccgcga gacgcgaaac gcagccgagc
     2521 tcgcgcgcgc gcggcggcgc cgcattttag cttcgtacat ccgagcgtcc gcctcgacga
     2581 gcaacttttc catcggcacc ggggcgagag gatcgaagct tgccacgccg aagctgaacg
     2641 acagctggta gtcacggttc gattttcgat tcgcctcgac gagcgcgtgc tcgagtcgag
     2701 ccgtgagcgc ggcgaccgcc gcctcgtcga cgtcgctcgc gaggacgacg aactcgtcgc
     2761 cgccgaggcg ggcgatcaga tcggtggcgc ggcaggtcga gcgcaaaaga tcggcagctt
     2821 cgccgatggc ccggtcaccc cgctcgtgac cgagcccgtc gttgataccc ttgagcccat
     2881 cgaggtcgat gaagagcgcg gcgagccgat gtttctggcg ctcggccacg cgcacgacct
     2941 gctgggagag ctcgaggaaa ccgcggcgat tatacaggcc cgtgagcccg tcgcggaacg
     3001 agagctgcct gagctcctcg gcttgttcgg cgagacgctg ctcgagctcg cgccgggccg
     3061 tcacgtcgcg gcccgctgac tggaagtgcc gaacgctgcc ggtttcgtcg ttcaccgccg
     3121 caaccttgaa ttcgaaccac cggtactcgc cgtcgttgcg gcagagtcga cacgtgacga
     3181 ccgcgctcgt cgccgcaccg gctcggaagc gcgagagctg gccttcgacg aactcgactt
     3241 cgtccgggtg caccaccgaa cggagctcga gcgcggacgc ccgttcgagc gagtagccga
     3301 gcagggtctc gagcgagggg ctcacgtaca cgagcttgcc gtccgagtcg tgcaagagga
     3361 cgaggtcgct cacgttgttg acgagcaggc ggtagcgctc ttcgctttcg gcgagctcgc
     3421 gcgccgccgc ctcgagctcg ttcgcatccc gctgcatatt gacgaagctg aaggccaaga
     3481 gcccgagcag gcaaaacgcc agcgcgccga tcgccaggac ggtgtcgagc tgagtcgcgt
     3541 tcgcggcggc tcggcgctcg tcgagcagat gctcctcttc cgccgacatg cgggcgaccg
     3601 tgccgcgcac acgatccatc aagagcttgt tctgaagact accgaccatg gcgtccgccc
     3661 cggcgatgtc gtcgtgatcg cgggcctcga cgagccttgc ggcgaaggtg agcttgtccg
     3721 ccaccgagcg cccgagctcc gccgcccgcg cagcctgggt cggattgtca cgcacgagct
     3781 cacgcgtgtg gcggagctcg t
//
LOCUS       DATIML010000433         2144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1530073, whole genome shotgun sequence.
ACCESSION   DATIML010000433 DATIML010000000
VERSION     DATIML010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530073"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VLJ38_07515"
     CDS             complement(<1..469)
                     /locus_tag="VLJ38_07515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39398.1"
                     /translation="MQSLSKTMAAGLILLGAGLLATSCVDNLSSVFIYGVMDLDSTQC
                     LAQPTTTSVLLASGTLDRAFSNGYQAAFLVGNHLTSRGSREKLRTETSRLQITGAHVT
                     LYGTTGYTTSFDTPATGLINPATGTDPGLAAVFARIVRQQDFANLGPDGQMIAR"
     gene            complement(580..>2144)
                     /gene="aroB"
                     /locus_tag="VLJ38_07520"
     CDS             complement(580..>2144)
                     /gene="aroB"
                     /locus_tag="VLJ38_07520"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HSU39399.1"
                     /translation="SGFMATGKSTVGRLVAARVGRPFVDLDTRLQARLGSKIADFFAQ
                     RGEAAFRVEERAELERVLAEASPEAAPVVALGGGALLARDVRLHALDRAVVVTLSASP
                     QEIARRAGANSGRPLLDAPDPARRALELLAQREDAYVEAHAVLPTDGRTPQAVADAAL
                     TAWRRNAIAVAAGEHSYVVEVGRGLLARLAELGTGASSFVLVSDRNVEPLHGRAAADA
                     LAASSRSVERIILPPGEREKHVGSVEHVWRAALHSGADRRSLFIGLGGGVITDMTGFA
                     ASTYLRGVGWVGVPTTLLAMVDASVGGKTGVDLEQAKNAVGAFWQPRGVLCDADLEAT
                     EPARGYTSALAEVVKTAIIGDPELFALLEVEAPAVRSRDAELVTEIVRRAVRVKARVV
                     GLDERESGLRAVLNLGHTVGHALESHAGFERLTHGEAVSLGLVAALRIGAALGQTPRS
                     LVERVGALLAALGLPTDLAREPVHEATELIALDKKRAGSRVRFVVARELGAVDTLDID
                     LSELRTLARNLH"
BASE COUNT          346 a          708 c          754 g          336 t
ORIGIN      
        1 tgcgtgcgat catttggccg tcggggccca ggttcgcgaa atcctgctgg cgaacgatac
       61 gcgcgaagac ggccgcaagc cccgggtcgg taccagtggc aggattgatt agacccgtcg
      121 ccggtgtgtc gaacgacgtc gtgtagccgg tcgtgccgta cagcgtgacg tgcgcccccg
      181 tgatttgcag gcgggacgtt tcggtgcgga gcttttcgcg gctgccgcgc gacgtgaggt
      241 ggttgccgac gagaaaggca gcctgatagc cgtttgaaaa cgcccgatcg agcgtgcccg
      301 aggcgagtaa gacggacgtg gtcgtcggct gcgccaggca ctgcgtcgag tcgaggtcca
      361 tcaccccata aatgaaaacg gagcttagat tatcgacgca gcttgtcgcc aaaagcccgg
      421 cgccgagcag gatcagccca gctgccatcg tcttcgacaa gctctgcatc gtgcctcgtt
      481 tacggggaac acggctcttc tgccgccgct cgcacaagtc tagcggtcgc gcgctgaacc
      541 gccaaaaaat gagggaaatt cggccgtagc tcggagcgct taatgaagat tgcgcgcgag
      601 ggtccgaagc tcactcagat cgatgtccag cgtgtcgacc gcgccgagct cgcgcgcgac
      661 gacgaagcgc acccgcgacc ccgcgcgctt cttatcgagc gcgatgagtt cggtcgcttc
      721 gtgcaccggt tcgcgcgcga gatcggtggg cagtccgagc gcggcgagca gcgcgccgac
      781 tcgttcgacc agcgagcgcg gcgtttggcc gagcgcggcg ccgatgcgga gcgctgccac
      841 caggccgagg ctcaccgctt cgccgtgcgt caagcgctcg aagccagcgt gcgattcgag
      901 ggcgtgcccg accgtgtgtc cgagattcag cacggcgcgc aggccgctct cccgttcgtc
      961 caggccgacg acgcgcgctt tgactcgcac ggcgcggcgg acgatctcgg tgacgagctc
     1021 ggcgtcacgg cttcggaccg cgggggcctc tacttccagc aaggcgaaga gctcggggtc
     1081 gccgatgatg gctgtcttca cgacctcagc gagggcgctc gtgtagccgc gggcgggctc
     1141 ggtggcctcg aggtccgcgt cacagagcac tccgcgcggc tgccaaaaag ctccgaccgc
     1201 gttcttggct tgctccaggt cgacaccggt cttgcctccc accgaggcgt cgaccatggc
     1261 gagcagagtc gtcggcacgc cgacccagcc gacgccgcgc aggtacgtcg aggcggcgaa
     1321 gccggtcatg tccgtgatga cgcccccgcc gaggccgatg aaaaggctac gccgatcggc
     1381 accgctgtgc agggcagcac gccagacgtg ctcgacgctc ccgacgtgct tttcgcgctc
     1441 accgggcggc aagatgattc gctcgacgct tcgggagctg gcggcgagcg cgtccgccgc
     1501 tgcgcggccg tgcaagggtt cgacgttgcg gtcgctgacg agcacgaacg acgatgcgcc
     1561 ggtgccgagc tcggcgagtc gcgccaagag tccgcggccc acctcgacca cgtacgagtg
     1621 ctcgcctgcg gcgaccgcga tcgcgttgcg gcgccaggcg gtgagcgcgg cgtcggccac
     1681 agcttgtgga gtgcgaccat cggtgggcag cacggcgtgt gcttcgacgt aggcgtcctc
     1741 gcgctgtgcg agaagctcga gtgcacggcg tgccggatcc ggtgcatcga gcaggggtcg
     1801 gccgctgttc gcgccggcac gacgcgcgat ctcttgcggg gaggcgctca gcgtcacgac
     1861 gacggcgcgg tcgagcgcgt ggagccggac atcgcgtgcc aacagcgcgc ctcccccgag
     1921 cgcgacgacc ggagcagctt cgggcgaggc ctcggccagc acgcgctcga gctcggcgcg
     1981 ctcctcgacg cgaaaggcgg cttcaccgcg ttgtgcgaaa aagtccgcga ttttgctgcc
     2041 gagacgcgct tgtaagcggg tgtcgagatc gacgaaaggc cggccgacgc gtgcggctac
     2101 caagcggccg accgtcgatt ttccggtcgc catgaacccg ctca
//
LOCUS       DATIML010000434         2844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2973934, whole genome shotgun sequence.
ACCESSION   DATIML010000434 DATIML010000000
VERSION     DATIML010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2973934"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            321..731
                     /locus_tag="VLJ38_07525"
     CDS             321..731
                     /locus_tag="VLJ38_07525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39400.1"
                     /translation="MTGLATAGASLAYGGFLLTSGHSLAAKHDGLYVMSLGLTLAPFV
                     AHGVAGEWARGALFSIVPAIGGIGMAMLLAKRPDAPIKGKQKSQRIYPVLITVSVVGS
                     AVGIFDAALADERLPQVSVAVGEGFLGADLSGRF"
     gene            752..997
                     /locus_tag="VLJ38_07530"
     CDS             752..997
                     /locus_tag="VLJ38_07530"
                     /inference="COORDINATES: protein motif:HMM:NF025452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4266 domain-containing protein"
                     /protein_id="HSU39401.1"
                     /translation="MTDAIFKLLAGVALGAAGLAAATLLGGCAVVPQNHRAHFADPVM
                     RDADDALDAHRKRKLYTTREAAAGGDGKTAGGGCSCQ"
     gene            994..2190
                     /locus_tag="VLJ38_07535"
     CDS             994..2190
                     /locus_tag="VLJ38_07535"
                     /inference="COORDINATES: protein motif:HMM:NF023516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3570 domain-containing protein"
                     /protein_id="HSU39402.1"
                     /translation="MRHRLFARALFAGALVLSFTSARTSRADGGSFSDAEVLGPKPST
                     RVELVQTRVTAYEQKGFGYQSQAGPLSGPGSETLHVLQVQGEFVVQQGERLTHRVWVP
                     VDLVTSASANAIDGYYAKPDVISTASAQNLAKEIQYQLSARADDDTTWSAGAGVHHEE
                     NFLSWFYSLEYQRTLAEKNATLSVSWNQVLDWFDAFTLGGKRAGRASRASSNVNIGLS
                     QLLSPSTLVGVSYGVTLQRGELGNTWNTVPTAAGGRVSETLPKERVRHAASLSLAQWL
                     PWGGALKLRYRFYRDDWDVSAHSAEVELRQSIADWLIVGASYRYHHQTGVSFFTTSSP
                     AGLKYATADSDLALLFTQALGANAAVTLPTASFGNLVLSCGFEHYFRSDALRVNVATW
                     ATGFHF"
     gene            2289..2768
                     /locus_tag="VLJ38_07540"
     CDS             2289..2768
                     /locus_tag="VLJ38_07540"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSU39403.1"
                     /translation="MIRVVFAAFVASACASAPPPAARAPARLPEVSVLSLDRQTASLA
                     SFTRGRPALVALWATWCTACSRELAELDRLQTRLGSDALVVGVAVGEPYERVADFLRP
                     RRLAYAQLVDEDFKLSEALGERRVPATLVIDRNGAVRYSGGALDARALDALRSAIAE"
BASE COUNT          419 a          963 c          989 g          473 t
ORIGIN      
        1 atacgcgacc cgaccgttta ggcgacgctc gctggcgcag cgagcgtcgc gcaaacgcct
       61 gagcgcggcg gcttgttgcg cggaccctgc cgtgcgaggg tccgcgcggc gtgttcgttc
      121 gcgggtgctt gcgcttcggg agcttcggaa cgtgcctggc gctcgcgggt aacctccgcg
      181 cagctccggt cgacgctggc gtggcgcgcg agccgcctgt gctcgcaaca acgcaaatgc
      241 cgcccgaggc gctagtgccg gccgcgcgtg cggcggctga cgcgccttcc gaaccaagct
      301 cgcgcggagt gaaggcgctc gtgaccggcc tcgccacggc cggcgcgtcg ctcgcctacg
      361 gcggcttctt gctcacgagc ggccactcgc tggcggcgaa gcacgacggg ctgtacgtga
      421 tgagcctcgg actcacgctc gcaccgttcg ttgcacacgg cgttgcgggg gagtgggcgc
      481 gcggagcgct cttttcgatc gtgcccgcga ttggcggcat cggcatggcc atgcttttgg
      541 ccaagcgccc cgacgcgccc atcaagggca aacagaagag tcagcgcatc tatccggtgc
      601 tgatcacggt cagcgtcgtc ggcagcgccg tcggcatttt cgacgcggcg ctcgccgacg
      661 agcgcttgcc gcaagtgagc gtggccgtcg gtgagggctt cctgggagcg gacctgtcgg
      721 ggcggtttta gtcccgagtg agtggacgaa catgacagac gctatcttca agctgctcgc
      781 tggggtggcg ctcggcgcag cgggcctcgc ggccgcgacg ctgctcggcg ggtgcgcggt
      841 ggtgccccaa aaccatcgcg cccatttcgc cgatccggtg atgcgcgacg ccgacgacgc
      901 gctggatgcg caccgcaagc gcaagctcta caccacgcgt gaagcggccg cgggcggcga
      961 tggcaagacg gcggggggcg gctgtagctg ccagtgaggc atcgcctgtt cgcccgggcg
     1021 ctcttcgcgg gcgctctcgt cctctcgttc acgtccgctc gcacgagccg cgccgacggt
     1081 ggctcgttca gcgacgcgga ggtgctcggc cccaaacctt cgacgcgtgt ggagctcgtg
     1141 cagacgcgcg tcaccgcata cgagcaaaag ggtttcggct accagtcgca agcgggaccg
     1201 ctctcggggc cgggctcgga gacgctccac gtgctccagg tgcaaggtga gttcgtcgtg
     1261 cagcagggtg agcgcctgac gcatcgcgtt tgggttccgg tcgatctcgt gaccagcgcg
     1321 tcggcgaacg ccatcgacgg ctactacgcg aaaccggacg tgatcagcac ggcttccgcg
     1381 caaaatctcg ccaaggagat ccaatatcag ctttcggcgc gcgccgacga cgacacgacc
     1441 tggagcgccg gcgcgggcgt gcaccacgaa gaaaacttcc tctcctggtt ctactccctc
     1501 gagtaccaac gaacgctcgc cgaaaagaac gccacgctca gcgtcagctg gaaccaggtc
     1561 ctcgactggt tcgacgcgtt cacgctcggc ggcaagcgcg ccggtcgcgc gtcgcgcgct
     1621 tcctcgaacg tgaacatcgg cttgtcccag ctgctctcgc cgagcacgct cgtgggcgtg
     1681 agctacggcg tgacgctgca gcggggcgag ctcggtaaca cctggaacac cgtgcccacg
     1741 gcggcgggcg gccgcgtcag cgagaccttg cccaaagaac gagtccggca cgcggcgtcg
     1801 ctctctctcg cgcaatggct gccttggggt ggcgccttga agctccgtta tcgcttttac
     1861 cgtgacgact gggacgtgag cgcgcacagc gccgaagtcg agctgcgcca gagcatcgcc
     1921 gactggctca tcgtgggcgc gagctaccgc taccatcacc agacgggcgt ctcgtttttc
     1981 acgacgagct cgcccgcggg gctcaagtac gcgaccgccg acagcgacct cgcgcttttg
     2041 ttcacgcagg cgctcggcgc aaacgccgcc gtcacgttgc cgacggcctc gttcggcaac
     2101 ctcgttctga gctgcggttt cgaacactac ttccgttcgg acgcgcttcg agtcaacgta
     2161 gcgacgtggg cgactggctt tcacttctga cccagcggcg cgtacgagcc gaacggcatg
     2221 tgcgagccga acggcgtgta cgagccgaac ggcgtgtacg agccgaacgg cccgtaggat
     2281 gtaaggcgat gattcgcgtg gtcttcgcgg cgttcgtcgc gtcggcgtgt gcttctgcgc
     2341 cgccgcccgc cgcgcgtgct cccgcgcgtt tgcccgaggt atcggtgctg tcgctcgatc
     2401 gtcaaacggc gtcgctcgcg tcgttcacgc gcggccggcc ggcgctcgtg gcgctctggg
     2461 cgacctggtg cacggcgtgc tcgcgtgagc tcgccgagct cgatcgcttg cagacgcggc
     2521 tcggcagcga cgcgctagtc gtcggcgttg ccgtaggcga gccgtacgag cgcgtggcgg
     2581 attttctacg gccgcgccgc ctcgcgtacg cgcagctcgt cgacgaggac ttcaagctgt
     2641 cggaggcgct cggtgaacgg cgcgtgccgg cgacgctcgt catcgaccgg aacggtgccg
     2701 tgcgctacag cggcggcgcg ctggacgcgc gggcgctcga cgcgctccgg agcgccatcg
     2761 cggagtgaac gacctgcccg gatcgcccgc tcagagctgc gagatgaact tccacgccag
     2821 cggtggaatg aaggccttca ggcc
//
LOCUS       DATIML010000435         4546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1244112, whole genome shotgun sequence.
ACCESSION   DATIML010000435 DATIML010000000
VERSION     DATIML010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4546
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1244112"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VLJ38_07545"
     CDS             complement(<1..185)
                     /locus_tag="VLJ38_07545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39404.1"
                     /translation="MTIQFGSPRGEDELVALGGILGWAFGFDPADARTWLDHGGVVNV
                     RIARRGDRVVGGLLEIP"
     gene            410..1939
                     /locus_tag="VLJ38_07550"
     CDS             410..1939
                     /locus_tag="VLJ38_07550"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39405.1"
                     /translation="MLGSYQLLAPIGTGGMGRVWVARETRIIPGTGKWRLMAVKTALA
                     EDGASQDFFRSLFDEARIASLLTHPNVCTIHVVEKERGVDYLVMDYSDGASLREMLDA
                     TPGKKLDLHVAARIIARVCSGLQAAHDLVAEDGEPLGVVHRDVSPQNVLIAANGQVRI
                     TDFGVAKARGQLHAPTQTGEVKGKIAYMAPEQVTTKDIDRRVDVFAIACVLYEASVGQ
                     RPFHGGDALSTLYQLLEEPIVPPSARAPGYPPELEAIVLKAMERDREQRYPSAAEFGR
                     ALERWLITEKATVTDADVAAALRSSLGDHIDALHAKIENAILAIESGKADSLPPPEDE
                     AVTRIGPSATPQGGRTLGGASLPDLGTKRSRSGIVLAIGGALAIAATVAFVLARPGPA
                     PEKTSEPAVHQKAPEQPATTSTALAAGATVTPVASSEPTAMPSATTEPSGKSSGTPAN
                     TRPGLRRPAHTTAVPTTTPTSQPTSTSGATTLHPGVEPTARPPKKPRSLDNDNPFAPT
                     P"
     gene            complement(2009..3406)
                     /locus_tag="VLJ38_07555"
     CDS             complement(2009..3406)
                     /locus_tag="VLJ38_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU39406.1"
                     /translation="MKGDVATLPPPPRALYEVTIYVRQETRTVDLVPGSVSGIGRGAD
                     NAIRIDDPSVSRHHACLHVGDDVTVEDLGSANGTMVVRSLHGSLEDDTVGGSSHTIPQ
                     GERMELQVGDVLRVGQVVLVLQRKGGSSFPAPPGSSGQPVLVDPDMRRAYELLRKAAA
                     TEISVLLLGETGAGKEVMAETVHRWSLRADGPFLKLNCAALTDTLLESELFGHERGAF
                     TGAHAAKAGLLESTDGGTVFLDEIGELSPGTQAKLLRVLEERAVIRVGATKPRRIDVR
                     FVTATNRDLAQRVQAGLFRSDLYYRISGLVIRIPPLRNRPSEIEPLARHFLREFSIRS
                     GQSVPTLGPAALGKLLAHDWPGNVRELRNVMERATLLVTGSVLQPEHVMIESSVDNGP
                     SHDLFDAEFEAETAVIASPFIEGATPEDEKARILKALEACGGNQTRAAKMLGIARRTL
                     INRIEQFNLPRPKKG"
     gene            3585..>4546
                     /locus_tag="VLJ38_07560"
     CDS             3585..>4546
                     /locus_tag="VLJ38_07560"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39407.1"
                     /translation="MGKRGASVNPPAPDQHGQEASSDVDVQITTEPPAANVAPLMTPE
                     PPRQPMTTVPAPARAAQRAPASHAPKKPSRAPLPGARSTKPPPPPVSAMKAGQIVGRY
                     RLLVPIGAGGMAQVWAAKPESAGLARTVAIKLVLPDYAADSEYERMFVDEAMVASAIR
                     HPNVCETLELGRDGDVIFMVLEWIAGESLSGILQQKGALHPLPDAIAARIVAEGCSGL
                     HAAHEAVGGDGEPLGIVHRDVSPPNILISTNGHVKVSDFGIAKARYQLHSKTRTGEIK
                     GKFAYIPPEQILGRGVDRRADIYAMGCVLYIATLGLRPFGGGASA"
BASE COUNT          752 a         1588 c         1544 g          662 t
ORIGIN      
        1 atcgggattt cgagcaggcc gccgacgacc cggtcgccgc ggcgcgcgat gcgcacgttc
       61 acgacgccgc cgtgatcgag ccaggtccgg gcatcggccg ggtcgaagcc gaacgcccag
      121 ccgaggatgc cgccgagcgc cacgagctcg tcctccccac gcggcgagcc gaattggatc
      181 gtcatggcgc tcccttcttc gcccggagcg cccggccgag caagtcccgg gggggcgatg
      241 tacgggcgat gtacgggcga tgtacgggcg acgtacgctg cggcgggcct cccgacgcta
      301 tgtaagtctt ggtcggacgt gcggagcctt ggccgaagcg ggcgcggtca gctatcgtag
      361 gtttgaagga gccttggcaa gctcgggcac gtcccttcgg agcggcgaca tgctgggctc
      421 ctaccagctg ctagccccga tcgggactgg tggaatggga cgcgtgtggg tcgcgcgcga
      481 gacgcgcatc attcccggca cgggcaagtg gcgcctcatg gccgtgaaga ccgcgctcgc
      541 cgaagacggc gcgagccagg acttcttccg cagcctattc gacgaggcgc gcatcgcttc
      601 gctgctgacg catccgaacg tctgcaccat ccacgtcgtc gagaaggaac gcggggtcga
      661 ctacctcgtg atggactact cggacggcgc gtcgctgcgg gagatgctcg acgccactcc
      721 gggcaagaag ctcgacctgc acgtggcagc gcgcatcatc gcgcgcgtgt gctcgggtct
      781 gcaggcggcg cacgatctgg tcgccgagga cggcgagccg ctcggcgtcg tgcaccgcga
      841 cgtgtccccg cagaacgtgc tcatcgcggc gaacggccag gtgcgcatca ccgacttcgg
      901 ggtcgccaag gcgcgcggcc agctgcacgc cccgacccaa accggtgaag tgaagggcaa
      961 gatcgcctac atggcgccgg agcaggtgac gaccaaagac atcgaccggc gcgtcgacgt
     1021 cttcgcgatc gcgtgcgtgc tctacgaggc ctcggtcggc cagcgaccct tccacggcgg
     1081 cgacgcgctc tcgaccctgt accagctgct cgaggagccc atcgtgccgc cgagcgcgcg
     1141 cgcgccgggt tacccgcccg agctcgaagc gatcgtgctg aaggcgatgg agcgcgatcg
     1201 cgagcagcgc tacccgtcgg ccgcagagtt cgggcgcgcg ctcgaacgct ggctcatcac
     1261 cgaaaaggcc acggtgacgg acgccgacgt cgcagcggcg ctccggagct cgctcggcga
     1321 tcacatcgac gcgctgcacg cgaagatcga aaatgcgatt ttggcgatcg agtcgggcaa
     1381 agcggattcg ctgccgccgc ccgaagacga ggccgtgacg cgcatcggcc cctcggcgac
     1441 gccccagggc ggccgcacgc tcggcggcgc ttcgctcccc gacctcggaa ccaaacgcag
     1501 ccgttccggt atcgtgctcg ccatcggcgg cgcgctcgcg atcgcggcga cggtcgcgtt
     1561 cgtgctcgca cggccgggtc ctgctcccga aaagaccagc gaacccgccg tccatcaaaa
     1621 ggcaccggag cagcccgcga cgacgagcac cgcgctggcg gcgggcgcga ccgtgacgcc
     1681 cgtggcgagc agcgaaccga ccgccatgcc gagcgcgacc acggaacctt ccggcaagtc
     1741 gagcggcacg cccgcgaata cgcggccagg cctgcgccgg ccggcgcaca cgacggcggt
     1801 gcccacgacg acgccgacca gtcagccgac gtccacgtcc ggcgcgacga cgctgcaccc
     1861 cggcgtcgag ccgacggcgc ggccgcccaa gaagccgcgc tcgctcgata acgataaccc
     1921 gttcgcaccg acgccgtagc gcgtgctgcg gcgccgtgac ggcgcgtgca cgcgcccact
     1981 cgccgtacgt cgccgtgacg gcgcgcgctc agcccttctt cggccgcggc aaattgaact
     2041 gctcgatgcg gttgatcagc gtgcgccgcg caatgcccag catctttgcc gcgcgcgtct
     2101 gattgcctcc gcaggcctcg agcgctttga ggatgcgcgc cttctcgtcc tcgggcgtcg
     2161 cgccctcgat gaagggcgac gcgatcacgg ccgtctcggc ctcgaactcg gcgtcgaaca
     2221 aatcgtgcga cggtccgttg tcgaccgagc tctcgatcat cacgtgctcg ggttgcagca
     2281 ccgaacccgt gacgagcaaa gtcgcgcgct ccatcacgtt ccgtagctcg cgcacgttgc
     2341 ccggccaatc gtgcgcgagc agcttgccga gcgcggcggg cccgagcgtc ggcacgctct
     2401 ggcccgaacg gatgctgaat tcccgcaaaa aatggcgcgc gagcggctcg atctcggacg
     2461 gtcgattccg tagcggcggg atgcggatca caaggccgct gatgcggtag taaaggtcgc
     2521 tccgaaacag gcccgcctgg acgcgctgcg cgagatcgcg gttcgtcgcc gtgacgaagc
     2581 gcacgtcgat gcggcgcggc ttggtcgcac ccacgcgaat cacggcgcgc tcctcgagca
     2641 cgcgcaagag cttcgcctgc gtgcccggcg agagctcgcc gatctcgtcg aggaacaccg
     2701 tgcccccgtc ggtcgactcg agcaagcccg ccttcgctgc gtgcgcgccc gtgaacgcgc
     2761 cgcgctcgtg cccgaagagc tcgctctcga gcagcgtgtc cgtgagcgcg gcgcagttga
     2821 gcttcaagaa cggaccgtcc gcgcgcagcg accagcgatg caccgtctcg gccatcactt
     2881 ctttgccggc acccgtctcg ccgaggagca gcaccgagat ctcggtcgcg gccgccttgc
     2941 gcaagagctc gtaggcgcgg cgcatgtccg gatcgaccag cactggctgg ccggagctac
     3001 cgggcggcgc gggaaaactc gaaccgcctt tgcgctgaag cacgagcacg acttgaccga
     3061 cacgtagcac gtcgccgacc tggagctcca tacgctcacc ctgagggatg gtgtgactcg
     3121 agccgccgac ggtgtcgtct tcgagcgagc cgtgcaggct gcgcacgacc atggtgccgt
     3181 tcgcgctgcc gagatcctcg accgtgacgt catcaccgac gtgtaggcag gcgtggtggc
     3241 gcgacaccga cggatcgtcg atgcgaatcg cgttgtcggc gccgcgtccg atgccgctca
     3301 cgctgccggg cacgagatct acggtgcgcg tctcttgccg cacgtagatg gtgacttcgt
     3361 agagagcgcg cggcgggggt gggagggtgg ctacatcgcc cttcatgagt ttcgagctcg
     3421 gggcccgcga agcttacatc ggcgtgcttt gagcgcagcg aaagagcagc cgttcacgag
     3481 taaatcaggg tccaatgcgc acgcccacat ggtgggagaa aagtgccgca ctttagcatg
     3541 gtgatcattg tgagacgcgg cggatgatgt atcgtgaaag tatcatgggt aagcgaggcg
     3601 cgagtgtgaa cccgcccgct cctgaccaac acggtcagga ggcctcgtcg gacgttgacg
     3661 tgcagatcac gaccgagcct ccggccgcaa acgtcgcgcc gctcatgacg cccgagccgc
     3721 cgcgacaacc gatgaccacg gtgcccgcgc cggcgcgggc cgcgcagcgg gcgcccgcct
     3781 cgcacgcccc caagaaaccg tcgcgcgcgc cgctgccggg cgcacgctcg accaagccgc
     3841 ccccgccgcc ggtctcggcg atgaaggcgg ggcaaatcgt cggccgctac cgtttgctcg
     3901 tgcccatcgg cgcgggcggt atggcgcaag tttgggccgc caaacccgaa tcggcgggac
     3961 tcgcgcgcac ggtcgcaatc aaactcgttt tgcccgacta cgccgccgac agcgaatacg
     4021 agcgcatgtt cgtcgacgag gcgatggtcg cgtctgcgat tcgtcacccc aacgtgtgtg
     4081 aaacgctcga gctcggccgc gacggcgacg tgatcttcat ggtgctcgag tggatcgccg
     4141 gcgagtcgct gagcggtatc ttgcagcaga agggcgcgct gcacccgtta cccgacgcga
     4201 tcgccgcgcg catcgtcgcc gagggttgct ccggacttca cgccgcgcac gaggcggtcg
     4261 gcggcgacgg cgagccgctc ggcatcgtgc atcgcgacgt ctcgccgccg aacatcctga
     4321 tctcgacgaa cggacacgtc aaagtcagcg acttcggcat cgccaaggcg cgctaccagc
     4381 tgcactccaa gacccgcacg ggcgagatca agggcaagtt cgcgtacatc ccgccggagc
     4441 aaattctcgg gcgcggcgtc gatcggcgcg cggacatcta cgccatgggc tgcgtgcttt
     4501 acatcgcgac gctcggcctc aggcccttcg gcggcggcgc gagcgc
//
LOCUS       DATIML010000436         3568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_666767, whole genome shotgun sequence.
ACCESSION   DATIML010000436 DATIML010000000
VERSION     DATIML010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3568
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666767"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..921
                     /locus_tag="VLJ38_07565"
     CDS             229..921
                     /locus_tag="VLJ38_07565"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU39408.1"
                     /translation="MQGRISPAAGQRVYTPLVLSIYDWYVLEFSCGKIWQCSRERLLA
                     QYQRCVGPRHLDVGVGTGYYLDHVHFPTGTPEVTLLDLNPESLAHTSRRIARYAPQVV
                     HGNVLEPNGLPDGHFDSIGLSFLFHCLPAGGAGKWRALDYLGPKLAPGGTLFGSTILG
                     RSAPLLRQRWLMRVYNRSGIFDNRADDMDALEHELHSRFDDVHIEREGVVALFTAKRR
                     SAARRDSARKPD"
     gene            complement(963..1631)
                     /locus_tag="VLJ38_07570"
     CDS             complement(963..1631)
                     /locus_tag="VLJ38_07570"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSU39409.1"
                     /translation="MNAERTVSVFDFDGTLVHGDSVTRFAVAYLARRPGRLLFMLPFL
                     PASVALLPFHATRTPGVALFWWALTCGTRTRPFVAALRAFAETTLAEHVNETTFAELA
                     ARLSRDEDVVVATAAPSVIVHGLLHARGLRGARVVGTRCVRRFGGLVPSPHCIGATKV
                     TELRRRFGLEAWTEVYTDSAFDLPIVLRAASVTLVEPSRSTLGRVERALTSGVPLRVL
                     RRVT"
     gene            complement(1628..1939)
                     /locus_tag="VLJ38_07575"
     CDS             complement(1628..1939)
                     /locus_tag="VLJ38_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39410.1"
                     /translation="MGVRWSRSKTAARALRPIAKVTFTPAIVARPTEGAERWALLGNV
                     SPENAGDEPRRRRKADKPGPAGEGDQPAGDDDDDDDEDEAKDDPNAASDSAKPFPSNG
                     E"
     gene            2026..>3568
                     /locus_tag="VLJ38_07580"
     CDS             2026..>3568
                     /locus_tag="VLJ38_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008063311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSU39411.1"
                     /translation="MNPASHPGAHAQPADPVSPAAGNTSDTAVDPVCGMTVDAASPQR
                     LTHAGREYVFCCEGCRDLFKADPERYLHASAAPATHAEHGGAHAHHGGAHEHHGAGPS
                     KQPSTSATAATQWTCPMHPEIRRDAPGSCPICGMALEPLLPAHDAGESSELRDMRRRF
                     WFAAALSVPLLLLTMSDMLFGAAVARAFSARPRVFVELLLATPVCTWAAWPFFVRAFD
                     SLKNRSLNMFTLIGLGVGVAYGYSLVAALAPGLFPPAFKDEQGVVGVYFEAASVIVTL
                     ILLGQVLELRARSQTSSAIQELLGLAAKSARRLRADGAEEDVPLEQIAAGDRLRVRPG
                     EKVPVDGVVLEGASNVDESMVSGEPMPAEKRPGDHVIGATLNGTGGFVMRAEKVGADT
                     LLARIVASVSEAQRSRAPIQNLADRVASYFVPAVIAIAVVTFGVWALVGPEPRLAHAL
                     VNAVAVLIIACPCALGLATPMSIMVAMGKGASMGVLFRNAEAIELLGRVDTIVIDKTG
                     TLTEGK"
BASE COUNT          559 a         1244 c         1191 g          574 t
ORIGIN      
        1 accgggctcg gaccgctctg cacgaagccc gatacctcag tgagtccggc gcgctgcgat
       61 ccgtgagtcg agctcggatt tagcaggcga accccgcggg ttcacggtgt cgtgccgtga
      121 gcccgcgcgg ctattttctt acacgcggac gtacggccgg gccagaatcc gagggaccaa
      181 acttattgcg ccttccggtt ttgaacagcg gatctaaact gtcgttggat gcagggcagg
      241 atttcaccgg cggccgggca gcgcgtctac accccgctcg tgctgtcgat ttacgactgg
      301 tacgtgctcg aattctcgtg cggaaaaatt tggcaatgtt cgcgcgaacg cttgctcgca
      361 cagtatcagc gctgcgtcgg cccgcggcac ctcgacgtgg gagtcgggac tggctactac
      421 ctcgatcatg tgcacttccc gacgggcacg ccggaggtca cgctcctcga tctgaacccg
      481 gagagcctcg cgcacacgtc gcgccgcatc gcccgctacg cgccgcaggt cgtgcacggc
      541 aacgtgctcg aaccgaacgg cctacccgat gggcacttcg actccatcgg cctgagcttt
      601 ctatttcact gcttgccggc gggcggcgcg gggaagtggc gcgcgctcga ctatctcgga
      661 ccgaagctcg cgccgggcgg gacgctcttc ggcagcacca tcctcggccg ctcggcgccg
      721 ctgctccgcc agcgctggct catgcgcgtc tacaatcgca gcggcatctt cgataatcga
      781 gcggacgaca tggacgcact cgaacacgag cttcactcac gcttcgatga cgtgcacatc
      841 gagcgcgaag gcgtcgtcgc gctgttcacg gcgaagcggc gctcggcggc gagacgcgat
      901 tcggcgcgca aacccgactg acacgagtgg cgaaggcttg ggacgagcag acgaccgtcc
      961 gctcaggtca cgcgacgcaa cacgcgcagc ggcacgccgc tcgtgagcgc gcgttcgacg
     1021 cggccgagcg tgcttcggct cggctcgacc aaggtgacgc tcgctgcgcg gagcacgatg
     1081 ggcaagtcga aggcgctgtc cgtgtagacc tccgtccagg cttcgagccc gaagcggcgg
     1141 cggagctcgg taaccttggt cgcgccgatg cagtgcgggc tcggaacgag gccgccaaag
     1201 cgccgcacgc agcgggttcc gacgacgcgc gcgccacgca ggccccgcgc gtgtaacaag
     1261 ccgtgcacga tgacggatgg tgccgccgtc gcgacgacga catcttcgtc gcggctgagg
     1321 cgcgcggcga gctcggcgaa ggtcgtctcg ttcacgtgct cggcaagcgt cgtctcggcg
     1381 aaggccctga gcgctgccac gaaggggcgg gtacgcgtac cgcacgtgag cgcccaccaa
     1441 aatagcgcca cgcccggcgt gcgcgtcgca tgaaacggca ggagcgccac cgaggcgggc
     1501 aagaacggca acatgaagag caaccgcccg ggccggcgcg ccaagtaagc gacggcaaaa
     1561 cgcgttacgg aatcgccgtg caccagcgtg ccgtcgaaat cgaacacgga gaccgtgcgc
     1621 tccgcgttca ttcgccgttg ctcgggaaag gcttcgcgct atcgctcgcc gcgttcggat
     1681 cgtccttcgc ctcgtcctcg tcgtcgtcgt cgtcgtcgtc gcccgctggt tgatcgccct
     1741 ctcccgcggg gcccggcttg tcggctttcc tgcgtcgccg cggctcgtcc ccagcgttct
     1801 cgggcgacac gttgccgagg agcgcccagc gctcggcgcc ctctgtcggc ctggccacta
     1861 tcgccggggt gaacgtgacc ttggcgatcg gccgcaaggc gcgcgctgcc gttttggagc
     1921 ggctccagcg gactcccatt cgcgcatcgg tagtacgatg cgtgcgctcg cacaaggcgc
     1981 gcgaaaattg tcttgctccg ctcggctcga gcggcagagt gacgcatgaa cccggcgagc
     2041 caccccggag cgcacgcgca acctgctgac cccgtttcgc ctgcagccgg aaatacgtcg
     2101 gacacggccg tcgatcccgt gtgcgggatg accgtcgacg ctgcgagccc ccagcgcctg
     2161 actcacgcag gccgtgagta cgtcttctgt tgcgaggggt gccgcgacct gttcaaggcc
     2221 gatcccgagc gctacctcca cgcctcggcg gccccggcaa ctcacgccga gcacggcggc
     2281 gctcacgcac accacggcgg cgcacacgag caccacggcg ccggcccctc gaaacagccg
     2341 tcaacctccg cgacggccgc cacgcaatgg acctgcccga tgcaccccga aatccggcgg
     2401 gacgcaccgg gcagctgtcc gatttgcggc atggcgctcg agcccctgct ccccgcgcac
     2461 gacgcgggcg aaagctcgga gcttcgcgac atgcggcgcc gcttctggtt cgcggccgcg
     2521 ctgagcgtgc cgctgctgct cctcacgatg agcgacatgc tcttcggggc cgccgtcgcg
     2581 cgcgcattct ccgcgcgccc gcgtgtcttc gtcgagctct tgctcgcgac gccagtctgc
     2641 acgtgggcgg cgtggccgtt tttcgtgcgc gcgttcgatt cgctgaaaaa ccgcagcctc
     2701 aacatgttca cgctgattgg gctcggcgtg ggcgtcgctt acggctactc gctcgtcgcc
     2761 gcgcttgccc ccggcctgtt tccgccggcg ttcaaggacg agcagggcgt cgtcggcgtg
     2821 tacttcgagg ccgcgagcgt catcgtcacg ctgatcttgc tcggtcaggt gctcgagctc
     2881 cgcgcgcgca gccaaacgag ctcggccatc caagagctgc tcggcttggc cgccaagtct
     2941 gcgcggcgac tgcgcgccga cggcgctgaa gaagacgtac cgctcgagca aatcgcagcg
     3001 ggcgatcggc tacgcgttcg cccgggcgag aaggtgccgg tcgacggcgt ggtgctcgaa
     3061 ggcgcgagca acgtggacga atcgatggtg agcggggaac cgatgcccgc cgagaagcga
     3121 cccggtgatc acgtcatcgg ggcgacgctg aacggcacgg gcggcttcgt gatgcgcgcg
     3181 gaaaaagtcg gcgcggatac gttgctcgcg cgcatcgtcg cctcggtctc ggaagcgcag
     3241 cgcagccgcg cgccgatcca gaacctcgcc gaccgcgtcg cgagctattt cgttcccgcc
     3301 gtcatcgcga ttgcggtcgt gaccttcggc gtgtgggcgc tcgtcgggcc cgagccgcgc
     3361 ctggcgcacg cgctcgtcaa cgccgtggcg gtgctcatca tcgcgtgtcc gtgcgcgctc
     3421 ggcctcgcga cgccgatgtc gatcatggtc gccatgggca agggcgcgag catgggcgtg
     3481 ctgttccgca acgccgaggc catcgagctg ctcggacgcg tcgataccat cgtgatcgac
     3541 aagaccggca ccctcaccga aggcaaac
//
LOCUS       DATIML010000437         3451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4997739, whole genome shotgun sequence.
ACCESSION   DATIML010000437 DATIML010000000
VERSION     DATIML010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4997739"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VLJ38_07585"
     CDS             complement(<1..183)
                     /locus_tag="VLJ38_07585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39412.1"
                     /translation="MPDAAGPPDSNRDAARLPKLTWPRVRLNVLLFALTVWSVFDTGA
                     VDAGTPYRLLAGWKFAV"
     gene            complement(176..829)
                     /locus_tag="VLJ38_07590"
     CDS             complement(176..829)
                     /locus_tag="VLJ38_07590"
                     /inference="COORDINATES: protein motif:HMM:NF017952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HSU39413.1"
                     /translation="MTLGFGRVLPAVPDDELSTASRPAALPRALGRVVASDVVRASDL
                     ARAILARAETEAKALLEAAESRAAALAADLTARAKTDAATALAARELAVAARETNALE
                     RERDQLVALARLLAERLLGETLRLDPTRVVALARQTLAEARGARRLTLAVHPDDVPHL
                     ERALAAQALPPPVTVVADASRRPGSVRLDTELGSLDAELAPQLDRLAQKLREALEHA"
     gene            complement(826..1050)
                     /locus_tag="VLJ38_07595"
     CDS             complement(826..1050)
                     /locus_tag="VLJ38_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39414.1"
                     /translation="MNPSASSPDFQRAFVSMRYFLGAREQKLGAPLGDAPAAVVTEER
                     LAQPERARRADALAAEIGRIVRALEARNFR"
     gene            complement(1102..2286)
                     /locus_tag="VLJ38_07600"
     CDS             complement(1102..2286)
                     /locus_tag="VLJ38_07600"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HSU39415.1"
                     /translation="MANESLFIVGAARTPIGAFLGGLSALPAPRLGAVAIRAALERAK
                     VEPGLVEEVFMGNVLSAGIGQAPARQASIYAGLPSSVPCTTVNKVCGSGLQAAVLAAR
                     ALLVGDAELAVAGGMESMSNAPYYLPNARGGYRIGDGKLVDGMMYDGLWDPYNEYPMG
                     KAGELCAREYGFGREAQDAFAAESYRRANHAIATGAFKAEIASVSLPQKKGEPIVIDT
                     DEEPGRGDPAKLPKLRPAFDAEGTITAGNASSIDDGAAAVVLATEAAVKRHNLEPLAR
                     IVGWGVAAQAPEWFTTAPAQAIERTLARTKLSTGDIDLWEVNEAFACVTLACARLAGL
                     DLERVNVRGGAVALGHPIGASGARVLVTLIHALKYLRARRGLATLCIGGGEAVAMVVE
                     RT"
     gene            complement(2331..3311)
                     /locus_tag="VLJ38_07605"
     CDS             complement(2331..3311)
                     /locus_tag="VLJ38_07605"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF009251.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HSU39416.1"
                     /translation="MPTVSADTLRRALAHPLAATDFPTLGKKYEGKVRDNYTLADGRR
                     VLVTTDRISAFDHVLGTLPLKGQVLNFVAAWWFEKTRHLAPNHVLGVPDPNVLIAREC
                     QPLPVEMVVRAYLTGTTSTSIWVHYERGAREFCGHALPDGLRKHERLPELLLTPSTKA
                     AHGDHDVSASRAEILALTGMPPAEFDRAAELAMTLFREGQRICAERGLILVDTKYELG
                     KTPEGEIVVIDEIHTPDSSRFWYEKSYGERFAAGRDPESFDKEYVRRWLVEQGFRGEG
                     PIPTIPDHVKIEAVLRYIEAVEQITGQPFVPNLEEPQARLRKNLASLLTS"
BASE COUNT          520 a         1098 c         1280 g          553 t
ORIGIN      
        1 cacggcgaac ttccagccgg cgagcaggcg atacggagtg ccggcgtcga cggcgccggt
       61 gtcgaagacg ctccagacgg tgagcgcgaa aagcaggacg ttgaggcgga cgcgcggcca
      121 agtgagtttc ggtagccgcg cggcgtcgcg gttcgaatcg ggcggcccgg cggcatcagg
      181 catgttcgag cgcctcacgg agtttttgcg cgagccggtc gagctggggc gcgagctcgg
      241 cgtcgaggct gccgagctcg gtgtcgagcc ggacgctgcc gggacggcga ctcgcgtcgg
      301 cgacgacggt gacgggcggc gggagcgcct gcgccgcgag ggcgcgttcg aggtgcggca
      361 cgtcgtcggg gtggacggcc agggtgagcc ttcgcgcgcc gcgcgcttcg gcgagcgtct
      421 ggcgtgcgag cgcgacgacg cgcgtcggat cgaggcgcag ggtttcaccg agcagccgtt
      481 cggcgagcaa gcgcgcgagc gccacgagct gatcgcgctc ccgctcgagg gcgttcgtct
      541 cgcgcgcggc gacggccaat tcgcgcgcgg cgagcgccgt ggcggcgtcg gttttggcgc
      601 gtgccgtcaa gtcggcggcg agcgccgcgg cacggctttc ggcagcttcg agcagcgctt
      661 tcgcttccgt ctcagcgcgc gcgaggatgg cgcgcgcgag atcgctcgcg cgcacgacgt
      721 cacttgcgac cacgcggccg agcgcgcgcg gcagcgcggc gggccgcgaa gccgtcgaga
      781 gctcgtcgtc gggaacggcg ggaaggacgc ggccgaagcc gagggtcatc ggaaattcct
      841 cgcctcgagc gcgcgcacga tgcgtccgat ttcggcggcg agcgcgtcgg cgcggcgtgc
      901 gcgctcgggc tgtgcgaggc gctcttccgt cacgacggcg gcgggcgcgt caccgagcgg
      961 cgccccgagc ttttgctctc gcgcccccaa aaaataacgc atggacacga atgcgcgctg
     1021 gaaatcaggt gaagatgcgg aggggttcac ggcgccgaca gtttccgagg ctcgaacgaa
     1081 gcgcaggacg ccacgttcga tttaggtgcg ctcgacgacc atcgccacgg cttcgccgcc
     1141 gccgatgcag agcgtcgcga ggccgcggcg ggcacgcaga tatttgagcg cgtggatgag
     1201 cgtgacgagc acgcgcgcac cggaagcgcc gatgggatgg ccgagcgcga cggccccgcc
     1261 gcgcacgttg acgcgctcta aatcgaggcc ggcgaggcgc gcacaggcga gcgtgacgca
     1321 ggcaaaggct tcgttcactt cccacagatc gatgtcgccg gtcgaaagct tggtacgcgc
     1381 gagcgtgcgt tcgatggctt gagcgggcgc agtcgtgaac cattcgggcg cttgcgccgc
     1441 gacgccccag ccgacgatgc gcgcgagtgg ttcgagattg tggcgcttca cggcggcttc
     1501 ggtcgcgagc acgacggccg cggcgccgtc gtcgatgctc gacgcgttgc cggccgtgat
     1561 ggtgccctcg gcgtcgaacg cggggcgaag cttcgggagc ttcgcggggt cgccgcggcc
     1621 gggctcttcg tccgtgtcga tgacgatggg ttcgcctttc ttttgcggca gcgaaacgga
     1681 cgcgatttcg gctttgaacg cgcccgtggc gatggcgtga ttggcgcggc ggtagctctc
     1741 ggcggcgaac gcgtcttgcg cctcgcgccc gaagccgtac tcgcgcgcgc agagctcgcc
     1801 cgctttgccc atcgggtact cgttgtacgg atcccagagc ccgtcgtaca tcatgccgtc
     1861 gacgagcttg ccgtcgccga tgcggtaacc gccgcgcgcg ttcggcaagt agtacggcgc
     1921 gttggacatc gattccatgc cgcccgccac ggcgagctcg gcgtcgccga cgagtagggc
     1981 gcgcgcggcg agcaccgcag cttgcaggcc cgagccgcag actttgttca cggtggtgca
     2041 gggcacgctg ctcggcaggc ccgcgtaaat cgaggcttgc cgcgccggcg cttggccgat
     2101 gcccgccgaa agcacgttgc ccatgaagac ttcttcgacg agtccgggct cgactttggc
     2161 gcgctcgagc gccgcgcgaa tcgcgacggc accgagacgt ggggccggca aggccgaaag
     2221 gccgccgagg aatgcgccga tgggcgtgcg cgccgctccg acgatgaata ggctctcgtt
     2281 cgccatgagc ccgagcgtag cgtggatttt gctcgggagc agcgctcggc tcagctcgtc
     2341 aaaagggacg cgagattttt cctgagtcga gcctggggct cctcgaggtt cggcacgaac
     2401 ggctggcccg tgatctgctc gacggcttcg atgtaacgga gcacggcctc gatcttcacg
     2461 tggtccggga tcgtcggaat cggcccctcg ccgcgaaagc cctgctcgac gagccagcga
     2521 cgcacgtatt ctttgtcgaa gctctcgggg tcacgacccg cggcgaagcg ctcgccgtag
     2581 ctcttttcgt accaaaagcg cgaagagtcc ggcgtgtgga tctcgtcgat cacgacgatt
     2641 tcaccttcgg gcgtcttgcc gagctcgtac ttggtatcga ccaggatgag tccccgttcg
     2701 gcgcagatgc gctggccttc acggaacagc gtcatcgcga gctcggcggc gcgatcgaac
     2761 tcggcgggcg gcatgcccgt gagcgcgagg atctcggcgc gcgaggccga gacgtcgtga
     2821 tcgccatgcg cggccttggt gctcggcgtg agcaagagct cgggcagacg ctcgtgtttg
     2881 cgcagcccgt cgggcagcgc gtggccgcaa aactcgcggg cgccgcgctc gtagtgcacc
     2941 caaatgctgg tggaagtcgt gcccgtcagg taggcgcgca cgaccatttc gaccggtaac
     3001 ggctggcatt cgcgcgcgat gagcacgttc ggatccggca caccgagcac gtgattgggc
     3061 gccaggtgcc gcgtcttttc gaaccaccac gccgcgacga agttcaacac ctgacctttg
     3121 agcggcaaag tgccgagtac gtgatcgaac gcgctgatgc gatcggtcgt gacgagcacg
     3181 cgacggccgt cggcgagcgt gtagttgtcg cgaactttgc cttcgtattt cttcccgagc
     3241 gtcggaaaat cggtggcggc gagcgggtgc gcgagcgcgc ggcgcagagt gtcggcagag
     3301 acggtgggca cggcggcggc aagttagtgc cggaggggac gagctgcaat cgagcacatg
     3361 ggcgtgtttt cgtcgtcgcg cggcgtcata cgcgctcgcg tgtcgatact ccgctgcgat
     3421 ggcgcgacgg cgcgctagat tgagcgccgt c
//
LOCUS       DATIML010000438         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_952957, whole genome shotgun sequence.
ACCESSION   DATIML010000438 DATIML010000000
VERSION     DATIML010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952957"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1372)
                     /locus_tag="VLJ38_07610"
     CDS             complement(164..1372)
                     /locus_tag="VLJ38_07610"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU39417.1"
                     /translation="MLTKIFPNSAEPTSSPFNRQQFAALARSCEVQVLATIPWFPGAA
                     AFGRWSAAGRLAQVPKSERIGGLDVRHPRYAYVPKFAPGLSGPLYAASLVPEVLRYRG
                     RVDIVLGSWAYPDGYAAVSLAELLGVPAVIKVHGSDLNVLAKRPGPRRRMQRAFRHAA
                     RIVAVSRPLATIAAELGAPEDAIDIVPNGIDRALFHPREREAARRALGIPVAGKLVLY
                     VGHVAAAKGALDLVRAFAVGKESLGGARLVMVGDGADLRACTELAESLGVDATLVGAQ
                     PHERVPLWLAACDLLALPSWNEGVPNVVLEALASGRRVVATQVGGIPDVVTSELFGEL
                     VPPRDPQALAAALARAVAEPYDPIVISDALPTPTWDGSAKLLHRSLLRALEARAHASF
                     VRTPPETQAV"
     gene            complement(1407..>2097)
                     /locus_tag="VLJ38_07615"
     CDS             complement(1407..>2097)
                     /locus_tag="VLJ38_07615"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HSU39418.1"
                     /translation="FRRLGSFRVVAECHGVNACRGGDFYCATLGEAGRLAVVIGDACG
                     HGAEGAHVISRLLPDMLRLAEPGGGPGRLLATFNRRVAAQMPVDRFVTMTAVEIDPRS
                     GAVTIANAGHVPVLVRRASGKVELIGRSTGPALGLLDHCLYPEERHELHPGDVLVFMT
                     DGVLEAIESDLVTMPTLREVLAHAPAGSRAVQDAILEHLRARGAATDRTDDRTLVSVE
                     LLEQEVTRLAS"
BASE COUNT          332 a          713 c          776 g          276 t
ORIGIN      
        1 ccctggcccc gtcgcgtacc gggctcgcgc caggcgacga gcgagctcgg taagagtgct
       61 tcggcgagag ccttcgcgcc gcggcgaccg cgcgccttga gcgaatccga aggcgcgaga
      121 ggcgttcgtc gtgggccgag aatgtctgcg tccatgctca tcgttagacc gcctgagttt
      181 cggggggagt gcgaacgaac gaagcgtgag cgcgagcctc gagcgctcgg agcaggcttc
      241 ggtgcaagag cttggcgctg ccgtcccagg tcggcgtcgg cagcgcgtcg gagatcacga
      301 tcgggtcgta gggttccgcg accgcgcgcg cgagcgccgc ggcgagcgcc tgggggtcgc
      361 gggggggcac gagctcaccg aagagctcgg acgtgacgac gtcggggatc ccgccgacct
      421 gtgtcgcgac cacgcgccgg ccgctcgcga gcgcctcgag caccacgttc ggaacacctt
      481 cgttccagct gggcagcgcg agcagatcac acgccgcgag ccagagcggg acgcgctcgt
      541 ggggctgggc gccaacgagc gtcgcgtcga cgccgagcga ctccgcgagc tccgtgcaag
      601 cgcggaggtc tgcgccgtcg cccaccatca ccagccgagc gccgccgagc gactctttgc
      661 ccactgcgaa cgcgcgcacg aggtcgagcg cgcctttggc ggctgcgacg tgcccgacgt
      721 agagcaccag cttgccggcc acggggatcc cgagcgcgcg gcgcgcggcc tcgcgctcgc
      781 gcggatggaa gagcgcgcga tcgatgccgt tcggtacgat gtcgatggcg tcttccggcg
      841 cgccgagctc ggcggcgatg gtcgcgaggg gccggctgac cgcgacgatg cgcgcggcgt
      901 gccgaaatgc acgctgcatg cgccgccgcg ggccgggtcg tttggcgagc acgttcaaat
      961 cggagccgtg cactttgatc actgcgggca cgccgagcag ctcagcgagc gacaccgccg
     1021 cgtagccgtc cgggtacgcc caggagccga gcacgatgtc cacgcgcccg cggtagcgca
     1081 gcacctcggg cacgagcgaa gcggcgtaga gcgggcccga gagcccgggc gcgaacttcg
     1141 ggacgtacgc gtagcgcggg tggcgcacgt cgagcccgcc gatgcgctcg ctcttcggca
     1201 cctgggcgag ccggcccgcc gccgaccagc gtccgaaggc cgcggcgccg ggaaaccacg
     1261 gaatcgtggc gagcacctgg acctcgcacg agcgcgcgag cgcggcgaac tgctgccgat
     1321 tgaacggcga cgaggtcggt tcagcgctgt tcggaaagat cttggtgagc actaaaacac
     1381 gcatgaaaag ccgaagtgat gggggcctag ctcgcgaggc gcgtgacctc ttgttcgagc
     1441 agctcgacgc tgacgagggt gcgatcgtcc gtgcgatcgg tcgccgcgcc gcgcgcgcgc
     1501 aagtgctcca ggatggcgtc ttggacggcg cgactaccag ccggcgcgtg cgcgagcact
     1561 tcgcgcagcg tcggcatggt cacgagatcg ctctcgatcg cttcgagcac accgtccgtc
     1621 atgaagacga gcacgtcgcc cgggtggagc tcgtgccgtt cctcggggta gaggcagtgg
     1681 tcgagcaagc cgagcgcagg gcccgtgctg cgtccgatga gttcgacctt tccggacgca
     1741 cggcgcacca gcacggggac gtgaccagcg ttggctatcg tcacggcgcc ggagcgcgga
     1801 tcgatctcga ccgccgtcat cgtcacgaag cgatcgacgg gcatctgggc cgcgactcgt
     1861 cgattgaagg tcgcgagcag gcgccccggc ccgccgccgg gctcggcgag ccgcagcatg
     1921 tccggcagta gccgggagat cacgtgggca ccctcagcgc cgtggccgca ggcgtcgccg
     1981 atcaccacag cgaggcgccc tgcctcgccg agcgtcgcgc aatagaagtc gccgccgcgg
     2041 caggcattga cgccgtggca ttcggccacg acgcggaacg agccgagtcg ccgaaaa
//
LOCUS       DATIML010000439         2260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2395926, whole genome shotgun sequence.
ACCESSION   DATIML010000439 DATIML010000000
VERSION     DATIML010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2395926"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..1767)
                     /locus_tag="VLJ38_07620"
     CDS             complement(145..1767)
                     /locus_tag="VLJ38_07620"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39419.1"
                     /translation="MDPCPPDEELIAFALGKLKEAQLPAFHDHLDVCATCQQVLAEAA
                     HAVATGMAAPLSEDTDFNTTFRSGTVVASRYVISRFIARGAMGEVYEAYDRELTQRVA
                     LKTVASTACDNVRAVRRLRSEVQLARRVSHPNVCRIYDFGTHVLRDTGVQLHFLTMEF
                     VEGETLGQRVRLGGALPPAEALEVARELLFALRAAHGAGVLHRDFKSDNVMLKLGPVE
                     RASAVVLDFGLARDVGQSAPASVSQPTFVGTFGYMAPEVLEGMPHSTASDVYSFGVVW
                     FEMLAGQFPFEGASSPARALQCLQAAPPSPSSFNAAVTREIDELVLRCLARAPADRFS
                     TASEVLDALDALDERRISSMRPVTARARDAAPTAQRKRLFPAVALVGLGVAAAYWIGL
                     RQTPSIRSEASHAALGSKLLPAQRQPSQAVESRRTVGLATAVATATPGDELPPPSATR
                     PRAAQTAPQTARNARQLSGSSAPSPRTSPVVLSASAAPALDTPPAPAPAAPSAAPARA
                     PSALPPPAKPDWENPFGAADVARLAERAKTPS"
     gene            complement(1781..>2260)
                     /locus_tag="VLJ38_07625"
     CDS             complement(1781..>2260)
                     /locus_tag="VLJ38_07625"
                     /inference="COORDINATES: protein motif:HMM:NF019886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HSU39420.1"
                     /translation="PLQAWVRVTATRAALDRCRALGLSTARETELTDRLAAPWPGMEL
                     LISRARYGAAFQRALRDTVAGLPARERNALRMHVCGRCSIDEIGRAYGVHRATAARWL
                     ERARLAIREGVRGGLSRGGIELTESEYSSLARGMASQLELRLSGSFVQSAEQPQTPG"
BASE COUNT          352 a          769 c          796 g          343 t
ORIGIN      
        1 cctcgaagcg caccgtcgcg aaccaactcg gcgctgcgtt ccgcaagctc ggtgtttccg
       61 gttacggcga gatgctcgat cgcgtcatga cgcaggcgct cggcgtgcgc agcgccgaaa
      121 atcgcgccac ggcgtgagcg agcgtcagct cggcgtcttg gcgcgttcgg cgaggcgagc
      181 tacgtccgcc gcgccgaacg gattttccca atcgggcttg gctggaggcg gcagagcgga
      241 tggggcgcgt gccggcgcgg cgctcggtgc cgcaggcgct ggcgcaggcg gcgtatcgag
      301 cgccggagcg gcggacgcgg acagcacgac cggcgacgtg cgagggctcg gcgcggaaga
      361 gccgctgagc tgccgggcgt tccttgccgt ctgaggcgcg gtctgtgccg ctcgaggtcg
      421 cgtggcgctc gggggcggga gctcgtcgcc aggcgtcgct gtcgcgacgg ccgtcgcgag
      481 gcctaccgtg cgtcgcgatt cgacggcttg actcggctgt cgctgcgccg gcaggagctt
      541 agagccgagc gccgcgtgcg aagcttcgga cctgatgctc ggcgtctgcc gcaacccaat
      601 ccaatacgca gcggccacac cgaggccgac gagtgcgacc gctggaaaga gccgttttct
      661 ctgggccgtc ggggccgcgt cgcgggctcg cgccgtgact ggtcgcatcg aactgattcg
      721 gcgttcgtcg agcgcatcga gcgcgtcgag cacctcgctc gcggtcgaaa agcgatcggc
      781 tggcgcgcgc gccaagcaac gcagcacgag ctcgtcgatc tcgcgcgtta ccgcggcatt
      841 gaagctgctc ggcgagggag gggcggcttg aaggcactgc agcgcgcgcg ccggtgagct
      901 tgcgccctcg aacggaaatt gaccggccag catctcgaac cagacgacgc cgaaggagta
      961 aacgtcactc gccgtcgaat gcggcatgcc ctcgagcacc tcgggggcca tgtagccgaa
     1021 ggtgccgacg aacgtcggct ggctcacgct ggcgggcgct gactggccga cgtcccgagc
     1081 gaggccgaaa tcgagcacga ctgcgctcgc gcgttcgacg ggcccgagtt tgagcatgac
     1141 gttgtcgctc ttgaaatcgc gatgcaggac gcccgcaccg tgcgcggccc gcagcgcgaa
     1201 caagagctcg cgcgcgacct cgagtgcttc ggccggcggc agggcgcccc cgagccgcac
     1261 gcgctggccg agtgtttcgc cctcgacgaa ctccatggtc agaaagtgga gctgaacgcc
     1321 cgtatcgcgc aggacgtgcg tgccgaaatc gtagatgcgg cacacgttcg ggtggctcac
     1381 gcggcgggcg agctgaacct cactgcggag ccggcgcacg gcgcggacgt tgtcgcacgc
     1441 cgtcgaagcc accgtcttca gcgcaacgcg ttgcgtgagc tcgcgatcgt acgcttcgta
     1501 cacttcgccc atggcgcctc gcgcgatgaa gcgtgaaatc acgtagcggc tggcgacgac
     1561 cgtgccggat cggaaggtcg tgttgaagtc ggtatcttcc gaaaggggcg ccgccatgcc
     1621 cgtagcgacg gcgtgcgccg cctccgccaa gacctgctgg caagtggcgc agacgtcgag
     1681 atgatcgtga aatgccggaa gctgcgcctc ttttagcttg ccgagcgcga acgcgatcag
     1741 ttcctcgtcg ggcggacacg gatccatgct cgtcctttcc tcacccgggt gtctgcggtt
     1801 gctcggctga ctgcacgaag ctaccggaga gcctgagctc gagctggctc gccatgccgc
     1861 gagcaagact cgaatattcg ctctccgtaa gctcgattcc tccgcgcgac aagccgcccc
     1921 gcaccccctc ccgaatcgcg agccgcgccc gctcgagcca gcgggccgcc gtggcgcgat
     1981 gcacgccgta ggcgcggccg atttcgtcga tgctgcagcg gccgcaaaca tgcatgcgca
     2041 gggcattacg ttcccgggcc ggcaatccgg cgacggtgtc gcgcagcgcg cgctggaacg
     2101 ccgcgccgta gcgcgcccgc gatatcaaca gctccatccc cggccacgga gccgcgagac
     2161 ggtcagtgag ctccgtttcc cgcgccgtgc tcagcccgag tgcccggcag cgatccagtg
     2221 ccgcgcgcgt ggccgtgact cgcacccacg cctgcagcgg
//
LOCUS       DATIML010000440         1707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2974688, whole genome shotgun sequence.
ACCESSION   DATIML010000440 DATIML010000000
VERSION     DATIML010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2974688"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VLJ38_07630"
     CDS             <1..180
                     /locus_tag="VLJ38_07630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39421.1"
                     /translation="NTNDINGMKRVLKKLVAIDARLLGGFLTKRTHPLLQREAKKLLE
                     QSGQVPRKMMVQRGR"
     gene            complement(165..1229)
                     /locus_tag="VLJ38_07635"
     CDS             complement(165..1229)
                     /locus_tag="VLJ38_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39422.1"
                     /translation="MSLARSFSRQVHPYALSQYQYTYEHGFLIRGLPGELARLACGRS
                     SDCLVSLVEVVGTVSVLAFALVLWLVVQAQSRCAPAANLMLTAVASGPLLVQIAAARG
                     YHDALTLTLGLVAYHAFVRRRFVTSMLVFGLALLVHELVAVYILPLFALRLALSLRER
                     PLFVRQLAVVLLLGVAALGVVKLGHASRRQQREIASRLADTQELGRGWRQYRPAGIAA
                     AKLEPGTVNAARLRELTRPPNPRYVAPLALALVLVLLLLALNRALLWFPLYAAALVAP
                     VAILLVAWDVERLLSLAGLTALFVCLFALERTAVRRAPVYVLAATLTLCAVGLETHYN
                     VRGRYAYSGTLFGPERQRPR"
     gene            complement(1349..>1707)
                     /locus_tag="VLJ38_07640"
     CDS             complement(1349..>1707)
                     /locus_tag="VLJ38_07640"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FHIPEP family type III secretion protein"
                     /protein_id="HSU39423.1"
                     /translation="SQQRRSITHALTRGRPELGVLLLDAALEDTIRGAVSRTAAGSFL
                     TLAPAAGRDIVTAVRRALAPLGADVPPLLTQPDIRRFVRKLLEVDFPELRVVSYAELL
                     PELAVKPLATARVTDL"
BASE COUNT          343 a          544 c          618 g          202 t
ORIGIN      
        1 aacacgaacg acatcaacgg catgaagcgc gtgctgaaga agctcgtcgc catcgacgcg
       61 cgcttgctcg gcgggttctt gacgaagaga acgcacccgc tactgcagcg ggaagccaag
      121 aagctgctcg agcagagcgg acaagtgccg cgcaagatga tggttcagcg cgggcgctga
      181 cgctcggggc cgaacagcgt gccgctgtac gcgtaccggc ccctcacgtt gtaatgcgtc
      241 tctaggccga cggcgcagag tgtgagcgtc gccgccagca cgtacaccgg cgcgcgccgg
      301 acggcggtgc gctctagcgc gaagagacag acgaagagcg ccgtgagccc ggcgaggctc
      361 aagagtcgct cgacgtccca cgcgacgagc aggatcgcga ccggcgcgac caatgccgcc
      421 gcgtacagcg gaaaccagag gagcgcgcga ttcagcgcga gcagcagcaa aacgagcacg
      481 agcgccaggg cgagcggcgc gacgtagcga ggattgggcg ggcgtgtgag ctcccggagt
      541 cgcgcggcgt ttacggtgcc tggttcgagc ttggctgcgg caatgccggc cggacgatat
      601 tggcgccagc cccggccgag ctcttgggta tcggcaagcc ggctcgcgat ttcgcgctgc
      661 tgccgacggc tagcgtggcc gagcttcacg acacccaagg cagctacgcc gagcaggagg
      721 acgacggcga gttggcgaac aaagagcggt cgctcgcgta gagaaagcgc gagacgcagc
      781 gcaaagagcg gcagaatgta gaccgcgacg agctcgtgca cgaggagcgc gagcccgaag
      841 acgagcatgc tcgtcacgaa acgacgcctc acgaacgcgt ggtacgcgac gaggccgagc
      901 gtcagcgtca gcgcgtcgtg gtagccgcgg gccgcggcga tttgcacgag cagcggcccc
      961 gaggcgaccg ccgtcagcat cagattcgcg gccggcgcac agcggctctg cgcttgcacg
     1021 acgagccaga gcacgagcgc gaacgcgagc accgaaaccg tcccgacgac ttcgaccagc
     1081 gagacgaggc agtcgctcga acggccgcac gcgaggcgcg cgagctcgcc cggcaaacca
     1141 cgaatcagaa agccgtgctc gtaggtgtat tggtactggc tcagggcgta gggatgcacc
     1201 tggcgcgaga agctccttgc gagcgacacc aggatcgcag ccgctgaaat cgtcgcagcg
     1261 agccacggcg gtatttcagt agtgacgaag cgccgaacgc gccggctcaa atccaccatg
     1321 ccgaacccgc accgggcgtg ggactctatc agagatcggt cacccgagcc gtcgcgagcg
     1381 gcttcaccgc gagctcgggc aagagctcgg cgtaggacac gacgcgtagc tcggggaaat
     1441 cgacctcgag gagcttgcgc acgaaacgcc ggatgtcggg ctgggtgagg agcggcggga
     1501 catccgcgcc gagcggcgca agcgcgcggc gcacggccgt cacgatgtcg cgacccgcgg
     1561 ccggagcgag cgtgaggaaa ctgccggccg ccgtgcgtga cacggcgccg cgaatagtgt
     1621 cctcgagcgc tgcgtcgagc agcagcacgc cgagctcggg gcgaccgcgc gtgagcgcgt
     1681 gcgtgatgct gcggcgctgc tgcgaac
//
LOCUS       DATIML010000441         3447 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4129009, whole genome shotgun sequence.
ACCESSION   DATIML010000441 DATIML010000000
VERSION     DATIML010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3447
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4129009"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VLJ38_07645"
     CDS             <1..475
                     /locus_tag="VLJ38_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39424.1"
                     /translation="NVKVDSGQGMTPKKVSASFKNGGSDAQLVGLGYGNTELLSLAPG
                     LVKIGQWKHAEDIATPEIGELAVAQAEYFYDCEGTWTGASCNGKSADELALWHFRWRA
                     RLRRCNPGLANFAAAASATELFTRGLDGASASNLGPDNADVMLQLGKAVRDGLLH"
     gene            486..1097
                     /locus_tag="VLJ38_07650"
     CDS             486..1097
                     /locus_tag="VLJ38_07650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39425.1"
                     /translation="MYLSLPAPPHTLLRRRRSGARGAVFVESIIVISALSLGLVGLVF
                     MRDAYERRLGVLRLARAAVIAHSMAGCKANQPSAWVGPDLGRYAGSDAEPEPNTARSA
                     QASSGAASADDGGRSKRLLDKSGTTSSDGEGLLNPIATSDFSGHASVRLAEGAAFGRE
                     RTAFEARPRSRSYVTCGDEVKDGDYDKVLEMVKDEAQALFKTR"
     gene            1104..2099
                     /locus_tag="VLJ38_07655"
     CDS             1104..2099
                     /locus_tag="VLJ38_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39426.1"
                     /translation="MTHLRQTATGEFSMRLSWFRALLPSARSLRLLAYCTFVFGLSSL
                     CCERLLHAELGEAALRFGDELGGLLELSRDTETLLLDGARFHHARSVLAEPPDLALDR
                     LERECDERPGAFTSELAALAARAGAALDRYGVSTAARHGMLRYERGGRGVLVCFTRAA
                     SDERPELADTLRDFATTRDLTRFGQVRYAYAEARQGGGTLVTSIWSNDTLALSSLFPS
                     TGDSAGSDPRVLPRPPGFRRTLSAGAEQLPLGVWLYAGAAPPADVLAFYEPWLDDHGF
                     RRVAADAPLGASAYQRADGLQVFVSVVAEDGQTSVSLVETGTNGTSPVASVESEE"
     gene            2103..3419
                     /locus_tag="VLJ38_07660"
     CDS             2103..3419
                     /locus_tag="VLJ38_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39427.1"
                     /translation="MAKQRTGTSSSGRERRGLVALLSAWLRYFGDTTGATSVEHVLIM
                     SVALTGAVGFKELGTKLQHQLEGEAAHIEGKGMPRGGDLASLAASFDAPELDCAGTAC
                     SVPALSSPLTGSGTSGSNTTPGATAPVAGGSKPPPPPPPPPLTAAQKDRKSECEARLA
                     ASPQNYAPLEPKHKVVRARPADPAEAIARLCTEMVCECPHKSDEQCLKQWECIYGYVA
                     QHPTSKYFDNAGVTSADECPTDTNAHNDSVQAQCLSKQIQRWACEKTPVTGPLGDDIP
                     ELTTTAIAPSGISTTPTNRDPKVSQEAGEEAARNFRAVNFADYECKEGKLQGEFDLVC
                     VQGDKVIVVEAKGGTSDLGKRKNAAGRDYVQQGTRDYAYAIAAVMPPSDGGIDIAQKV
                     KDALDRGTLRYFKVRQPFSKAGTPLRPIVNEFDLDDPDTVCRDCKC"
BASE COUNT          614 a         1173 c         1142 g          518 t
ORIGIN      
        1 gaacgtgaag gtcgactccg ggcaaggcat gacgccgaag aaagtgagcg cgtcgttcaa
       61 gaacggcggc agcgacgcac agctcgtcgg gctcgggtac ggcaataccg agctcttgag
      121 cctcgcgcct gggctcgtga aaatcggcca gtggaagcac gcggaagaca tcgccacccc
      181 tgaaatcggc gagctcgccg tggctcaagc cgagtacttc tacgactgcg agggcacttg
      241 gacgggcgcg agctgcaacg gcaagagcgc ggacgaactt gcgctctggc atttccgctg
      301 gcgagcgcgc ttgcggcgct gcaacccggg acttgcgaac ttcgccgcgg cggcgagcgc
      361 gaccgagctc ttcacgcggg gcctcgacgg cgcctcggcc tcgaacctcg gacccgacaa
      421 cgccgacgtc atgctccagc tcggcaaagc cgttcgcgac ggtcttttgc actgaggttt
      481 gcaccatgta cctctcgctg cccgcaccgc cgcacacgtt gctccgacgc cgccgctccg
      541 gcgcgcgcgg cgcggtcttc gtcgaatcga tcatcgtgat atcagcgctg agcctcggcc
      601 tcgtgggcct cgtgttcatg cgtgacgcct acgaaaggcg gctcggcgtg ctgcgtctcg
      661 cgcgcgcggc cgtgattgct cactcgatgg ccggttgcaa agcgaatcag ccgagcgcct
      721 gggtcgggcc cgacctcggt cgttatgcgg gctcggatgc cgagccagaa ccgaacacgg
      781 cgcggagcgc gcaggcgtcg agcggggcgg cgagcgcgga cgacggggga cgctcgaagc
      841 gactcctcga caagagcggc acgacgagca gcgacggcga gggcctcttg aacccgatcg
      901 cgacctccga cttcagcggc cacgcgagcg ttcggctcgc cgagggagcg gcgttcggac
      961 gcgagcgcac ggcgttcgaa gcgcgtccgc gctcacgctc gtacgtgacg tgcggcgacg
     1021 aagtgaagga cggcgactac gacaaggtgc tcgagatggt caaagacgag gctcaagcct
     1081 tgttcaagac tagatagttc ttagtgacgc atctacgcca gacggcgact ggggaattca
     1141 gcatgcgatt atcatggttt cgcgccctgc taccgagtgc acgctcgctg cgacttctag
     1201 cgtattgcac gttcgtgttc gggctcagct cgctctgttg cgagcgtttg ctgcacgccg
     1261 agctcggcga agccgcgctc cgcttcggcg acgagctcgg ggggcttttg gagctatcgc
     1321 gcgacacgga gacactgctg ctcgacggcg cgcgtttcca ccacgcgcgc agcgtgctcg
     1381 cggagccgcc ggacctagcg ctcgaccggc tcgaacgcga gtgcgacgag cggcccggtg
     1441 cgttcacgag cgagctcgca gcacttgcgg cgcgcgcggg cgcggcgctc gaccggtacg
     1501 gggtgtcaac ggcggctcga cacggcatgc tgcgttacga gcgcgggggt cgcggcgtgc
     1561 tcgtctgctt cacccgagcg gcgagcgacg agcggccaga gctggccgac acgctgcgcg
     1621 acttcgcgac gacccgcgac ctcacgcgtt tcgggcaagt gcgttatgcc tacgcggagg
     1681 cgcgccaagg cggcggcacg ctagtaacgt ccatctggag caacgacacg ctcgcgctat
     1741 cctcgctgtt tcccagcacg ggtgacagcg ccggctccga tccgcgcgtc ttgcctcgac
     1801 cgcccggctt tcgccgcacg ctgtcggccg gcgccgagca gctaccgctc ggcgtgtggc
     1861 tctacgcggg tgcggcgccg cccgccgacg tgctcgcgtt ttacgagcct tggctcgacg
     1921 atcacggatt tcgacgcgtc gccgccgatg cgccgctcgg cgcgagcgcg taccagcgcg
     1981 ccgacggctt gcaggtcttc gtctccgtcg tggccgaaga cggccaaacg agcgtctccc
     2041 tggtcgaaac gggcacgaac ggaacgagcc ctgtcgccag cgtggaaagc gaggagtaag
     2101 cgatggcaaa gcaacgaacc ggaaccagca gcagcggccg cgaacggcga ggcctcgtcg
     2161 cgctgctctc ggcgtggctc cgctactttg gcgacacgac gggcgcgacc agcgtcgagc
     2221 acgtgctcat catgtcggtc gccctgacgg gcgccgtcgg cttcaaagag ctcggcacga
     2281 agctccagca tcagctcgag ggcgaggccg ctcacatcga gggcaagggc atgccgcgcg
     2341 gcggcgatct ggcgtcgctc gctgcgagct tcgacgcgcc cgagctcgat tgtgccggca
     2401 ccgcctgcag cgttcccgcg ctgtcctcgc cgctcaccgg cagcggtacg tccggctcga
     2461 acacgacgcc tggcgccacc gcgccggtcg cgggcggttc gaaaccgccg cctcccccgc
     2521 cgcctccgcc tctgaccgcc gcacaaaaag accgcaaaag cgagtgtgaa gctcgactcg
     2581 cggcatcgcc ccaaaactac gctccactcg agcccaaaca caaggtcgtc cgagcgcgac
     2641 ctgcggatcc cgcggaggcc attgcgcgcc tgtgcaccga gatggtgtgt gaatgcccgc
     2701 acaagagcga cgagcagtgc ttgaagcagt gggagtgcat ctacggctac gtcgcgcaac
     2761 atccaacttc gaagtacttc gacaacgccg gcgtcacctc ggcggacgaa tgcccgacgg
     2821 acaccaacgc tcacaacgac tccgttcagg cgcagtgctt gagcaagcag attcagcgct
     2881 gggcctgcga aaagacgccg gtcacgggtc ccctcggtga cgacatcccc gaactcacga
     2941 ccacggcgat tgcgccttcg ggcatcagca ccaccccgac gaaccgcgat cccaaggtct
     3001 cccaggaggc cggtgaggaa gccgcgcgca actttcgggc cgtaaacttc gcagattacg
     3061 agtgcaagga aggcaagctc cagggcgagt tcgacctggt ctgcgtgcaa ggcgacaaag
     3121 tcatcgtggt cgaggccaag ggtggcacga gcgatcttgg caaacgcaag aacgcggcgg
     3181 gccgagacta cgtgcaacaa gggacgcgcg actacgccta cgccatcgcc gccgtgatgc
     3241 cgccctcgga cggcggcatc gatatcgctc agaaggtaaa ggacgcgctc gaccgcggca
     3301 cactccgcta cttcaaggtg cgacaaccct tcagcaaggc gggcacgccg ctcaggccga
     3361 tcgtcaacga gttcgatctc gacgatcccg acaccgtgtg ccgcgattgc aagtgctagg
     3421 cccaggctcg tcatcatgcg caaaccc
//
LOCUS       DATIML010000442         1903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2396425, whole genome shotgun sequence.
ACCESSION   DATIML010000442 DATIML010000000
VERSION     DATIML010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2396425"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VLJ38_07665"
     CDS             complement(<1..619)
                     /locus_tag="VLJ38_07665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39428.1"
                     /translation="MSSTEPSSSATAAGTPPTPPIDPSASEKEASEVRPTPAMPTPSA
                     SGSDAPSGESSSAPPGASDATFAAAESEGHEAEHAEGEEHAEGEEADGDTVEADGSDA
                     AGAAPGVATPKKKRRRRKKKPGAHAGAPAPSAEGQSAPPTSGNKSGSKPPGSKGKRAR
                     RHRANDRAPFHVGEEVFGKVTAVIDAAIMVDLSGKALAIFDRSEME"
     gene            complement(712..1584)
                     /locus_tag="VLJ38_07670"
     CDS             complement(712..1584)
                     /locus_tag="VLJ38_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HSU39429.1"
                     /translation="MPIDLPVREVAADDPVPLVKSVVLVMSGKGGVGKSTVASNLAVA
                     LTRLGASVGLLDADIYGPSVPTMFGVHGQPLTDGQRIRPHERFGVKLMSIGFLLDDPK
                     SAVVWRGPMLHGALLQFLKDVAWEELDVLLLDLPPGTGDVALTLAQRVRSTGAVIVTT
                     PQEVALQDVYKSVSMAKKVGIPVLGVVENESYFVCDGCEKRHELFGKGGGQKIADFAE
                     APLLGQIPLVPAVREWGDAGTPLVEAQPGSAAGQAFIEVAERLLGEIRAQGGAATLSI
                     DRSGGVNRRLPISR"
BASE COUNT          268 a          656 c          646 g          333 t
ORIGIN      
        1 gctccatctc gctgcgatcg aagatggcga gcgccttgcc ggagagatcg accatgatgg
       61 ccgcgtcgat cacggccgtg accttgccga acacttcttc gccgacgtgg aacggcgcgc
      121 gatcgttcgc gcggtgacgg cgagcgcgct tgcccttgct cccgggcggc ttgctgcccg
      181 acttgttgcc ggaggtgggc ggggcgctct gcccctcggc gctcggcgcg ggcgcgcccg
      241 catgggcacc gggcttcttc ttgcggcggc ggcgcttctt cttgggcgtg gctacgcccg
      301 gcgctgcacc ggcggcgtcg gagccgtcgg cttcgaccgt gtcaccgtcc gcttcctcgc
      361 cttcggcgtg ttcctcgcct tcggcgtgct cggcttcgtg accttcgctc tctgcggcgg
      421 cgaatgtcgc gtcgctcgcg cccgggggcg cggacgaact ttcgccgcta ggcgcgtcgg
      481 atcccgaggc gctcggcgtc ggcatggccg gcgtcggacg cacctcggag gcttccttct
      541 cgctcgcgga gggatcgatc gggggtgtcg gcggcgtccc cgccgccgtg gcgctgctgc
      601 tcggttctgt ggagctcatc gggcgggccg tggcgctata ccgtgccttc aatcatctgc
      661 caacgcgtga ctgtctgatt tgcggtttgt gccgagggcg acacggtttc gtcagcggct
      721 gatgggcagc cggcggttga ccccgccgct tcgatcgatg ctgagcgtgg ccgccccgcc
      781 ttgcgcgcgg atttccccga gcaggcgctc ggcgacctcg atgaacgcct ggcccgccgc
      841 ggagcccggc tgagcttcga cgaggggcgt cccggcatcc ccccactctc ggacggccgg
      901 cacgagcggg atttgcccaa gcagcggcgc ctcggcaaag tccgcaattt tttgcccacc
      961 ccccttgccg aagagctcgt gccgcttttc gcaaccgtcg cacacgaaat agctctcgtt
     1021 ctcgaccacg ccgaggacgg gaatgccgac ttttttcgcc atgctgacgg acttgtagac
     1081 gtcctgcagc gcgacctcct gcggcgtcgt cacgatcacg gcgcccgtgc tgcggacgcg
     1141 ctgggcgagc gtcagcgcca cgtcgcccgt accgggcggc aagtcgagca agagcacgtc
     1201 gagctcttcc cacgccacgt ccttgaggaa ttggagcaaa gcgccgtgga gcatggggcc
     1261 gcgccaaacg acggcggatt tcggatcatc gagcaaaaat ccgatgctca tgagcttgac
     1321 cccgaaccgc tcgtgaggcc ggatccgctg cccgtcggtg agcggctggc catggacgcc
     1381 gaacatcgtc ggcacgctgg gtccgtaaat atcggcgtcg agcaggccga cgctcgctcc
     1441 gagccgcgtg agcgccacgg cgaggttact ggcgacggtg ctcttgccca cgccgccttt
     1501 accgctcatg acgagcacga cgctcttcac gagcggaacg gggtcatcgg cggcgacttc
     1561 acgaacgggc aggtcgatcg gcaccgcgcc tcggtaggcc gcgaataggg gtttgtcaaa
     1621 ccccgaacgc gtcagtcgcg tagccgaatg agacggcggt acgtggtggc cacagcttta
     1681 gcgcgcgacg ccggccactg agcttccggc gttggtactc cgcatgcatg cgcggaacgg
     1741 catgtccgcc atccaggaac ctccggaact ccttcccacc acggacctcg tcaaacaggc
     1801 gctctccgag gcgcgcgacc tcgtccagct cgaggtgcgg atagccaagg aggagctccg
     1861 tgaggagctc gtcgaggcaa aacgagccgc gatcgcgggc gcg
//
LOCUS       DATIML010000443         5443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_377332, whole genome shotgun sequence.
ACCESSION   DATIML010000443 DATIML010000000
VERSION     DATIML010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5443
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377332"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..2190)
                     /locus_tag="VLJ38_07675"
     CDS             complement(46..2190)
                     /locus_tag="VLJ38_07675"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HSU39430.1"
                     /translation="MSLRSGALRRAAVSFVALAASSGCRAWPQQPVVSKLDIAGLDDL
                     SDRALDAQLATTETSLLFGVFPRVLEYSTYDPAVVAKDTERIERWCRARGYYEAKVYA
                     ARVVHLDAHHVRVELAVELGDPVHVRRVDARGLALLPPSVASKVVRAIDLREGEIFDE
                     DRFETDKRELSRVIADGGYAFAHVEVKGNVDLVARAADVTYAVELGAYSHFGPVRIEG
                     LGEIPEKPVRDTLDLHEGDPYSVSELDDARTALLNLGVFSSVQISEDRTHPESGRVPL
                     KVTVRESKLRTVRVGGGAVFDVLRLAAHLTTGWEDRNFLGGMRRFSVDARPGATFFPT
                     RVPTGGAPFWAPERVLPEFHLRTVLRQPSLIEARTAGFLSAEYNLFPVLYPISADEDP
                     HHEPVLGYNQIRASTGVERAFFAHHLTLTPSYNWQANYPFSYRGDAAKSLDPVRVSFP
                     ELVSTLDFRNDPLEPTRGLYLSNSVQVAGYIFQGTVSDVRVRPEVRAYTRGILGRRSV
                     FAARLGFGFLFPKDYGSSLNPSSALGQQAAVNPKDADVVADQQTLLLRAFYSGGPNSN
                     RGYPLRGVGPHGPIGFLVPTGLSGVNCATASAAELPSGCIRPLGGLTLWELSLETRFP
                     ISGSLWGVAFVDASDLTREVMQIRLNYPHLSPGLGLRYLSPVGPLRLDVGFRPVYLQW
                     LGHRHLPPSEEQPNSDVLGVPMSIALAIGEAF"
     gene            complement(2244..2942)
                     /locus_tag="VLJ38_07680"
     CDS             complement(2244..2942)
                     /locus_tag="VLJ38_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39431.1"
                     /translation="MFPKVARISLLVGAVCVPLACGGEEAKYQPKPAYSGQKANLPSV
                     PTLQKKQVKNGDAYTVWGAAYDLRSVVHRKDIVGKDIQITGYITKTNIGDAPKCAVHK
                     TGKADPEDCHAPVPTFWIGDTKDAPENESIKVMGWASNFANIFDAIKAFDSPKNDGGY
                     DDQAWGVKVPDPLPAKGAKVTVKGKYSTTFMKASSGAEADPYQGILDFQDVKVLEPAP
                     ELATLPGVKRKEPK"
     gene            3152..3862
                     /locus_tag="VLJ38_07685"
     CDS             3152..3862
                     /locus_tag="VLJ38_07685"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSU39432.1"
                     /translation="MPRLIVIGDVHGCSRELDALLDRLGIMRDDRVVFVGDLVAKGPN
                     THLVLETVRRIGAEVTLGNHEKRLLDARDARREGRPLPRLDPTHARLLDELTDEDWAQ
                     LEAMPLWLDVDPLMRVVHAGIVPGVPMRDQDPHHLITLRSISATGEPSSKWGPPWAAR
                     YQGPPHIVFGHNARKDPQLHPDATGLDTGCVYGGALTALVVPLGSAPPELELRRDALV
                     AEPARKAYADYGGPLVNR"
     gene            3888..4613
                     /locus_tag="VLJ38_07690"
     CDS             3888..4613
                     /locus_tag="VLJ38_07690"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HSU39433.1"
                     /translation="MTRTIRVPLGELTAGERHIHGDEAHYLVRVLRLRPGATFTAFDP
                     VRRLEATVTLLEVERERVVARVSEPASAPAAGQADVTLVYCAGKGDKVEEVVRAATAL
                     AVSRVVVATSERTVARGPTSPERQKRWATIALDAARQSGRSDVPELAGPLPFAEALAR
                     SESGGALKLCLEPEAERALGASLRARGARPLVLLVGPEGGFSAEELARARDAGFELVR
                     LGALVLRTELAAVAALAAVLAHD"
     gene            complement(4620..>5443)
                     /locus_tag="VLJ38_07695"
     CDS             complement(4620..>5443)
                     /locus_tag="VLJ38_07695"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU39434.1"
                     /translation="LFQADKLTPADAAIFETFVVPRYLSLYGELLLEMLLVGDEARIL
                     HVGCRTGYPDLKLYERVDQAEIIGLDPSLPALELARNKAAARRDATIEYRILESGLTE
                     LDPEQFTHAIALHPIMTAEERVELFGGMRHLLCPGGQALIAMPLRGSFQEIADLLREY
                     ALKFDDTEFSKAVEYALATRPSIESLSEELEGVGFEDVDVEIRHTYLPFDSGRAFVED
                     PVTRLQILPELRNWLGEHDLKRPLEYVRDAIDKYWSEGKLELSVNVGCASARVPG"
BASE COUNT          912 a         1826 c         1841 g          864 t
ORIGIN      
        1 cgatgggggg cacctcaaac cagtccctcc atttttaggg cagtgctaaa atgcctcgcc
       61 aatcgcgagc gcgatggaca tcggcacgcc gaggacgtcg ctgttcggct gttcctccga
      121 gggcggcaag tggcgatggc cgagccactg caggtaaacc ggacgaaagc cgacatccag
      181 gcgcaagggt cccaccggcg agaggtaacg caaaccgagg ccgggcgaga ggtgcgggta
      241 gttcagccgg atctgcatga cttcacgcgt gagatcgctc gcatcgacga acgcgacgcc
      301 ccagagcgag cctgaaatcg ggaagcgcgt ctcgagcgag agttcccaga gcgtgagacc
      361 tccgagcgga cgaatgcagc cactcggcag ttcggccgcg ctcgccgtcg cgcaattgac
      421 gcccgaaagt cccgtgggca cgagaaagcc gatcgggccg tgcggaccga cgccacgtag
      481 cggatagcct cgattcgagt tcggtccgcc cgagtagaaa gcgcgcagca agagcgtctg
      541 ctggtcggcg accacgtcgg cgtctttggg gttcacggcc gcctgctgac cgagcgcgct
      601 cgagggattg aggctcgagc cgtaatcctt cggaaacaag aagccgaaac cgagccgcgc
      661 ggcgaatacc gagcggcggc cgaggatccc gcgcgtgtag gcgcgcacct cgggccgcac
      721 gcgcacgtca ctcaccgtgc cttggaagat gtagccggcg acttgcaccg aattcgaaag
      781 gtagaggccg cgcgtcggct cgagcggatc gttgcgaaaa tcgagcgtgc tcacgagctc
      841 gggaaacgag acgcgcaccg gatcgaggct tttggcagcg tcgccgcgat aagaaaacgg
      901 gtagtttgcc tgccagttgt aagagggcgt gagcgtcaga tgatgcgcga agaaggcgcg
      961 ctcgacgccg gtgctcgcgc ggatttggtt ataaccgagc acgggctcgt ggtgcggatc
     1021 ttcgtcggcg gagatcggat agagcacggg gaagaggttg tattcggcgc tcaagaatcc
     1081 cgccgtgcgc gcctcgatga gcgatggctg tcgcagcacc gtgcgcagat gaaactccgg
     1141 caagacgcgc tcgggcgccc agaacggcgc gcccccggtc ggcacgcgcg tcggaaagaa
     1201 cgtggcgccc ggccgcgcgt cgacgctgaa gcgccgcatt ccgcccaaga agttgcgatc
     1261 ttcccagccg gtcgtgagat gcgcggcgag tcgcagcacg tcgaacacgg cgccgccgcc
     1321 cacgcgcacc gtgcggagct tgctttcgcg caccgtcacc ttgagcggca cgcgcccgga
     1381 ctccgggtgc gtccggtcct cgctgatttg aacgctcgag aacacgccga gattcaggag
     1441 cgccgtgcgg gcgtcgtcga gctcggacac ggagtaaggg tcgccctcgt gcaggtccag
     1501 cgtgtcgcgc acgggcttct cggggatttc cccgagaccc tcgatgcgca cggggccgaa
     1561 atgcgagtac gcaccgagct cgacggcgta ggtcacgtcc gcggcgcgcg cgacgaggtc
     1621 tacgttgccc ttcacttcga cgtgcgcgaa cgcgtagccg ccatcggcga tgacgcgcga
     1681 gagctcgcgc ttgtcggttt cgaagcgatc ctcgtcgaag atctcgcctt cccgcagatc
     1741 gatggcgcgc acgaccttgc tcgcgacgct cggcggcaaa agagcgagcc cgcgagcatc
     1801 cacgcgccgc acgtgtacgg ggtcgccgag ctcgaccgcg agctccacgc gcacgtgatg
     1861 cgcgtcgagg tgcacgacgc gcgcagcgta gactttcgcc tcgtagtaac cgcgcgcgcg
     1921 gcaccagcgc tcgatgcgct cggtgtcctt ggcgaccacg gccgggtcgt aggtcgagta
     1981 ctcgaggacg cgcggaaaga caccgaagag cagcgacgtt tcagtcgtcg cgagctgggc
     2041 gtcgagcgca cggtcgctga gatcgtcgag ccccgcgatg tcgagcttcg aaacgacggg
     2101 ctgctgcggc caggcccggc agccgctcga ggccgcgagc gccacgaagc tcacggccgc
     2161 tcggcggagc gctcccgagc gaaggctcat cagccctcgc tgcttaccac gatcgcgcga
     2221 gcggccgcta aatcagcccc gcttcacttc ggttctttgc gcttcacgcc gggaagcgtg
     2281 gcgagctcgg gcgccggttc gagcactttc acgtcctgaa agtccaggat gccctggtac
     2341 ggatccgcct cggcgccgga cgaagccttc atgaacgtcg tcgagtactt gcctttgacg
     2401 gtcactttgg cgcccttcgc cggcaaagga tcgggaacct taacgcccca agcctgatcg
     2461 tcgtagccgc cgtcgttctt cggactgtcg aacgccttga tagcgtcgaa aatgttggcg
     2521 aagttggagg cccagcccat caccttgatc gactcgtttt cgggcgcatc cttcgtgtcg
     2581 ccgatccaga aggtcggcac gggcgcgtga caatcctcgg ggtcggcttt gccggtcttg
     2641 tgcacggcac acttgggcgc gtcaccgatg ttggtcttgg tgatgtagcc ggtgatttgg
     2701 atgtccttgc cgacgatgtc cttgcgatgg acgacgctac gcaagtcgta cgcggcgccc
     2761 cagaccgtgt acgcgtcccc gttcttcacc tgcttcttct gcaacgtggg aacgctcggc
     2821 agattcgctt tttggccgct gtaagcgggt ttcggctggt acttggcttc ctccccgccg
     2881 caggcgagcg gaacgcaaac ggcaccaacc agcagggaaa ttcgcgcgac cttgggaaac
     2941 atgcggaggg gcctcctcga actttctcgt gaatcccgcg cgtaatgtgg gggcgcgcga
     3001 gcgggagcca cagtagtctc gattccaccg gtaccgcaag gctcgctgcg acttccggcc
     3061 ttcaggccgc accagaacgg tccgccggcg cctggcttcg ccgtgcgagc gtgaaaatcg
     3121 tgtgtcgctg gtaggatttg ggccggaaag catgcctcgc ctgattgtga ttggagacgt
     3181 gcacggctgc agtcgggagc tcgacgctct cctcgaccga ctcggcatca tgcgcgacga
     3241 ccgtgtcgtg ttcgtcggtg acctcgtggc caagggcccg aacacgcacc tcgtgctcga
     3301 aacggtgcgg cgcatcggcg cggaggtaac gctcggcaat cacgaaaaac gcctgctcga
     3361 cgcgcgcgac gcccggcgcg agggacggcc gctgccccgc ctcgatccga cgcacgcgcg
     3421 tctgctcgac gagctcaccg acgaggactg ggcacagctc gaagcgatgc cactctggct
     3481 cgacgtggat ccactcatgc gcgtcgtcca cgccggcatc gtcccgggcg tccccatgcg
     3541 cgaccaggat ccacaccacc tcatcacgct ccgctccatt tcagcgacgg gcgagcccag
     3601 cagcaagtgg gggccgccgt gggccgcgcg ctatcaagga ccgccgcaca tcgtcttcgg
     3661 tcacaacgcg cgcaaggatc cgcaactgca tcccgacgcc acggggctcg acacgggctg
     3721 cgtctacggc ggcgcgctca ccgcgctcgt cgtgccgctc ggcagcgcgc cccccgagct
     3781 cgagctccgc cgcgacgccc tcgtggccga gcccgcgcgg aaggcctacg ccgactacgg
     3841 cggcccgctc gtgaatcgat gagcccactc agtccgaaac gtcagccatg acgaggacca
     3901 tccgcgtccc cctcggcgag ctcacggcgg gcgaacgcca catccatggc gacgaagcgc
     3961 attatctcgt gcgcgtgctc cgcctgcggc cgggcgcgac cttcacggcg ttcgatcccg
     4021 tccggcggct cgaggcgacc gtcacgctgc tcgaagtcga gcgcgagcgc gtggtcgcac
     4081 gagtgagcga gcccgcgtcc gcgcccgccg cgggccaagc ggacgtgacg ctcgtctact
     4141 gcgcgggcaa gggggacaag gtcgaggaag tcgtgcgcgc cgcgacggcg ctcgccgtga
     4201 gccgcgtcgt cgtcgccacg agcgaacgga ccgtcgcgcg cggccccact tcacccgagc
     4261 gccaaaagcg ctgggcgacg attgcgctcg acgcggcgcg ccagtcgggc cgtagcgacg
     4321 tgcccgagct cgcgggcccg cttccgttcg ccgaagcgct cgcccgctcc gagagcggcg
     4381 gcgcgctcaa actctgcctc gagcccgagg cggagcgcgc gctcggcgcg tcgctgcgtg
     4441 cacgcggagc gcgcccgctc gtgctgctcg tcggccccga gggcggcttt tccgccgagg
     4501 agctcgcccg cgcgcgcgac gccggtttcg agctcgtccg cttgggcgcg ctcgtgctgc
     4561 gaaccgagct cgccgcggtg gcggcgctcg cggccgtgct cgctcacgac tgagcggccc
     4621 tagccgggaa cgcgcgcgct cgcgcaaccg acgttcaccg acagctcgag cttgccttcc
     4681 gaccaatact tgtcgatcgc gtcgcgcacg tattcgagcg gccgcttgag gtcgtgctcg
     4741 ccgagccagt tgcggagctc gggcaggatc tgcaggcgcg tcacggggtc ttcgacgaag
     4801 gcgcgtccgc tgtcgaacgg caggtacgtg tggcggatct cgacgtcgac gtcctcgaag
     4861 ccgacgcctt cgagctcctc ggagagcgac tcgatcgaag gccgcgtggc gagcgcgtat
     4921 tcgacggcct tcgagaactc cgtgtcgtcg aatttgagcg catactcgcg taagaggtcg
     4981 gcgatttcct gaaatgaacc gcgcagcggc atcgcgatca gcgcttgccc gccggggcag
     5041 agcaagtgcc gcatgccgcc gaacagctcg acccgctctt ccgccgtcat gatcgggtgg
     5101 agggcgatcg cgtgcgtgaa ctgctcggga tcgagctcgg tgagcccgct ctcgagaatg
     5161 cggtactcga tcgtcgcgtc acgccgcgcg gcggccttgt tacgcgccag ctcgagcgcg
     5221 gggagcgacg gatcgagccc gatgatttcc gcctggtcga cccgttcgta gagcttcagg
     5281 tcggggtaac ccgtgcgaca gccgacgtgt aggatacgcg cctcgtcgcc gacgagcagc
     5341 atctcgagca agagctcgcc gtaaagcgag agataccgcg gcacgacgaa cgtctcgaaa
     5401 atcgcggcgt cggccggggt gagcttatcg gcttggaaca aga
//
LOCUS       DATIML010000444         1843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1532358, whole genome shotgun sequence.
ACCESSION   DATIML010000444 DATIML010000000
VERSION     DATIML010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1532358"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..643
                     /locus_tag="VLJ38_07700"
     CDS             <1..643
                     /locus_tag="VLJ38_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HSU39435.1"
                     /translation="EFVSSDQLAREACHIEIDVLKAPIGKQDQYIAAYGGVTAFTFNQ
                     DGTVEIERVPIRPEVLDELETNLLIFYSGVEREAASVLSQQGASIQKNHDGAVERMHR
                     IKQLGKDTQRILTHGNIDAYGELLHEHWMNKRKLASNMTDSTIDEHYEAARKAGAIGG
                     KLMGAGGGGFFMFYATPADRRRVYAALTARGLRPLRFRFDSTGARIVANVRQT"
     gene            689..>1843
                     /locus_tag="VLJ38_07705"
     CDS             689..>1843
                     /locus_tag="VLJ38_07705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39436.1"
                     /translation="MHTPYTDNYPAVVAVASGSVAASLVGVLWGRPLPRRASNVLFAA
                     GVATTALYAFQSDLTALVGALPGALTWLQFGATLTTLALFWSRPRWLGWLAALGQYGL
                     LWLGWWLKASEHELMFAHLAWYGTLLGVHALRSMPARAPGERPARLSYPVQDVVIFLL
                     SVALGAFVAADLFEKLIYNGDEVANSFQANVYAHLRAYAPVPPCPSMFENYWVFRYQG
                     RVFSQYTPGWPLFMAPFARMNMIWFAGPVMGGIAAVGIARVGRRLALGLGATYDGSER
                     IVAVAGPLAGMLSMLGPSLLLNAGSRFSHTMVCACFAWAVESAAELVTPRLSRRRAFF
                     FGCLLGAATALGLATRPSDGGFLGVGVFLYFAQALFRKRVSWAAFLGTCTG"
BASE COUNT          260 a          639 c          598 g          346 t
ORIGIN      
        1 cgagttcgtc tcgagcgatc aactcgcgcg cgaggcctgt cacatcgaga tcgacgtgct
       61 caaggcgccg atcggcaagc aggatcaata catcgccgcc tatggtggcg tgacggcctt
      121 taccttcaat caggacggca cggtcgagat cgaacgcgtg ccgatccgcc ccgaggtgct
      181 cgacgagctc gaaacgaacc tgctcatttt ctattccggc gtcgagcgcg aggcggcgtc
      241 cgtgctctcg cagcagggcg cctcgatcca gaagaatcac gacggcgccg tcgagcgcat
      301 gcaccgcatc aaacagctgg gcaaggacac gcagcgcatc ctcacgcacg gcaacatcga
      361 cgcctacggc gagctcttgc acgagcactg gatgaacaaa cgcaagcttg cctccaacat
      421 gacggactcg acgatcgacg agcactacga agcggcccgc aaggcaggcg cgatcggcgg
      481 caagctgatg ggcgcgggag gcggcgggtt cttcatgttt tacgcgacgc ccgccgacag
      541 gcggcgcgtg tatgcggcgc tcacggcgcg cggtctccgg ccattgcgct ttcgcttcga
      601 ctcgaccggc gcccgcatcg tcgcgaacgt tcgccagacg tgagcgtgct tctcgagtct
      661 tctcgcgcga tcttcgtttc gctctgcgat gcatactccc tacacggata attatcccgc
      721 ggtcgtcgcg gtcgcttcgg gctccgtcgc ggcgagcctc gtcggcgtgc tctggggcag
      781 gccgctgccg cgccgcgcgt cgaacgtgct gttcgcggcc ggagtcgcga cgacggccct
      841 atacgctttc cagtcggacc tcaccgcgct cgtgggcgcg ctgcccggcg cgctcacctg
      901 gctgcaattc ggcgcgacgc tgacgacgct cgccctgttt tggagtcgcc cgcgctggct
      961 cggctggctc gcggcgctgg gacaatacgg tctgctgtgg ctcggctggt ggctcaaggc
     1021 gtccgagcac gagctcatgt tcgcgcacct cgcgtggtac gggacgctgc tcggcgtgca
     1081 cgcgctccgc agcatgcctg cgcgtgcccc cggcgaacgc cctgcgcgct tgtcctaccc
     1141 ggtgcaagac gtcgtcatct tcttgctatc ggtcgcgctc ggcgcgttcg tggcggccga
     1201 cctgttcgaa aagctcatct acaacggcga cgaagtagcc aacagctttc aggccaacgt
     1261 ctacgcacac ctccgagcgt acgcccccgt gccgccgtgc ccgtcgatgt tcgaaaacta
     1321 ctgggtgttc cgctaccaag gccgcgtctt ctcgcagtac acgccgggct ggccgctctt
     1381 catggcgccc tttgcgcgca tgaacatgat ctggttcgcg gggccagtca tgggcggcat
     1441 tgcggccgtc ggcatcgcgc gcgtgggacg ccgtctcgcg ctgggcctcg gcgcgaccta
     1501 cgacgggtcg gaacggatcg tcgccgttgc cgggccgctc gccggcatgc tgtcgatgct
     1561 gggcccgagc ttgctcctca acgcgggctc gcgtttctcc cacacgatgg tgtgcgcctg
     1621 tttcgcgtgg gccgtcgaga gcgcggccga gctcgtcacg ccgcgccttt cacggcgccg
     1681 cgcgtttttc ttcggctgcc tgctcggcgc ggcgacggcg ctcggtctcg ccacgcgacc
     1741 ctccgacggc ggctttctgg gcgttggcgt gttcctctac ttcgcgcagg cgctcttcag
     1801 aaagcgcgtc agctgggcgg cgtttttggg cacttgcacc ggc
//
LOCUS       DATIML010000445         3048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4711812, whole genome shotgun sequence.
ACCESSION   DATIML010000445 DATIML010000000
VERSION     DATIML010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3048
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4711812"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..371
                     /gene="rpmH"
                     /locus_tag="VLJ38_07710"
     CDS             222..371
                     /gene="rpmH"
                     /locus_tag="VLJ38_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HSU39437.1"
                     /translation="MKRTYQPHNTSRLRTHGYRKRMSTKGGRKVLANRRRKGRWRLTV
                     STYEK"
     gene            409..774
                     /gene="rnpA"
                     /locus_tag="VLJ38_07715"
                     /pseudo
     CDS             409..774
                     /gene="rnpA"
                     /locus_tag="VLJ38_07715"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
     gene            785..1018
                     /gene="yidD"
                     /locus_tag="VLJ38_07720"
     CDS             785..1018
                     /gene="yidD"
                     /locus_tag="VLJ38_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HSU39438.1"
                     /translation="MIARALIFLIRIYQLTLSRLLGPVCRFQPSCSRYAAECLELHGA
                     LRGSLLAVRRVAKCHPFHPGGYDPPPPRTSVPG"
     gene            1105..2796
                     /gene="yidC"
                     /locus_tag="VLJ38_07725"
     CDS             1105..2796
                     /gene="yidC"
                     /locus_tag="VLJ38_07725"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HSU39439.1"
                     /translation="MERGNLGRLAFIAVGLFLAFVVVPKWFHGSSSMQPLRPEHLVTA
                     ATERPPESFCDIWTDDFHAKLSSRSATLTHFELLHAKYRKKGVPIDLSTTPDVEDRRP
                     LRFDWQNPAVGIPSEDWLVGGNLLDYAVEQSSKTSCEFTYEDARARVTETVRATGRPY
                     ELEVTATVTNRTTRPLRQALTVDEDAWRTDKEQKSGLMGVSALVTHVECVSDTGLTTR
                     KRVEDFDADKFKDFPATPLAAGDWFQAPGKPAFGAVSNAYFSQAIVPLAGPTDPACQL
                     QVEERWNASRYRNRKDDPEGGGMFRARLAYAPHEVTPGATETYRVLSYMGPKERSILE
                     AVGGGGHRLIELIDLGFFSAIAKILVAFLLKVHSVVPNWGLAIIVLTITARTLLFPLT
                     LPSVKQMIRMRELKPEMDVLNEKFKDDAQAKGLAQMELWRKHSVNPLKGCLPQMASMP
                     VWFALYTTLQTAVELYNIPFLWFPDLSGPDPLFILPFVIGATNFLQQKLMPMQGDPAQ
                     QKMMLYLMPGMFIVMMLFLPSGLGVYMFTNGLLGIAQQQLVERHAKRAVAQGKKA"
BASE COUNT          536 a         1063 c          972 g          477 t
ORIGIN      
        1 aagcggcgcg aaaaacgcta cgacgcggaa aaatcgagtt tcgtcgcaga gttcgagcac
       61 ttcgccgacg tggtccaaag gggtcgtccg ctcgccgtgt cacccgcgga cgccctcgcc
      121 gaccttgccc tcgtggaagc cgtcgcgcga taaatgccga tggacttgac gaaaacccga
      181 gcgcatggct gactcccggc cccaaaccgc cgggacccgt catgaagcgc acctaccagc
      241 cccacaacac gagccgtctt cggacgcatg gctaccgcaa gcgcatgagc accaaaggcg
      301 gtcgcaaagt gctcgccaac cgccggcgca agggtcgctg gcgcctgacg gtttcgacct
      361 acgaaaagta gcgcgtcccc ggctcgcgcc gcgcgtcacc cgacgcacgt ccgcaagcgc
      421 gccgagttcg agcgcatcca gaagggcggc gaacgggtcc acaccgagca cttcgtgctc
      481 atcctcgcgc gccaagaggc cgacgccccc gcgcggctcg gcatcacggc gtcgcgtaag
      541 atcggcggag ccgtcgtgcg caatcgagcc aaacgtctcg tgcgcgctgc attccgcgag
      601 tgcgcgacgt ggttcgccca gggcgtcgac gtggtcgtga tcgtgcgcaa agcgccggaa
      661 aatcggcgtc tcggcgacgt actcgccgaa tggcgcggcg cggcgagcac gctcgagcgc
      721 cgccagcaga gcgtgcttgc gcgccccgcc caacgcgcga acactcgtgc gtgaagtcgc
      781 gtccatgatc gctcgcgcgt tgattttcct gattcgtatc taccagctca cgctgtcgcg
      841 cctgctcgga ccggtttgcc gctttcagcc ttcgtgctcg cgctacgcgg ccgagtgttt
      901 ggagctgcat ggcgcgctcc gcggcagcct tttggccgtc cgccgggtcg cgaagtgtca
      961 tccctttcat cccggcggtt acgacccgcc cccgccccgc acttccgtgc ccggatagtg
     1021 ctcggctggt cgcttagcgc tctaagctcc ccgggaccgt gctagagggc gggcggtcgg
     1081 tcgtccaaac gcccgcacca caccatggaa cgaggcaatc tcggtcgctt agccttcatc
     1141 gccgtcgggc tcttcctcgc cttcgtggtc gtacccaagt ggttccacgg ctcgagctcg
     1201 atgcagccgc tgcggccgga gcatctggtc acggccgcca cggagcggcc gcccgagagc
     1261 ttctgcgaca tctggacgga cgacttccac gccaagctgt cgagccggag cgcgaccctg
     1321 acgcacttcg agctcctgca cgcgaagtac aggaagaagg gcgtgccgat cgacctgtcg
     1381 acgacgccgg acgtcgagga ccggcggccg ctccgcttcg attggcagaa ccccgccgtc
     1441 ggcatcccga gcgaggactg gctcgtcggt ggcaacctgc tcgactacgc cgtcgagcag
     1501 agctcgaaga cgagctgcga attcacgtac gaggacgcgc gcgcccgcgt cacggagacg
     1561 gtccgcgcga cggggcggcc ctacgagctc gaggtcacgg cgaccgtgac caaccgcacg
     1621 acccggccgc tgcgacaggc gctcacggtc gacgaggacg cgtggcgcac cgacaaggag
     1681 caaaagtcgg ggctcatggg cgtgagcgcg ctcgtgacgc acgtcgaatg cgtctcggat
     1741 acgggtctca cgacgcgcaa acgcgtcgag gacttcgacg ccgacaaatt caaggacttt
     1801 cccgcgacgc cgctcgcggc cggcgattgg ttccaggcgc cgggcaagcc ggccttcgga
     1861 gccgtctcga acgcctattt ctcacaggcg atcgtgccgc tcgcgggtcc caccgacccg
     1921 gcgtgccagc tccaggtcga ggagcgctgg aacgcgagcc gttaccgtaa tcggaaggac
     1981 gaccccgagg gcggcggcat gttccgcgcg cggctcgcct acgcgccgca cgaggtcacg
     2041 cccggcgcga ccgagaccta ccgcgtgctc tcgtacatgg ggccgaagga gcgcagcatc
     2101 ctcgaggccg tcggcggcgg cgggcaccgg ctgatcgagc tcatcgatct cggcttcttt
     2161 tcggcgatcg ccaagatcct cgtcgcattc ctgctcaagg tgcacagcgt ggtcccgaac
     2221 tgggggcttg ccatcatcgt gctgacgatc acggcgcgca cgctgctctt cccgctcacg
     2281 ttgccctccg tgaagcagat gattcgcatg cgggagctca agcccgagat ggacgtcctg
     2341 aacgagaagt tcaaggacga cgctcaggcc aagggccttg cgcaaatgga gctctggcgc
     2401 aagcacagcg tgaacccgct caagggctgc ttgccgcaga tggcctccat gccggtctgg
     2461 ttcgccctct acacgacgct ccagacggcg gtcgagctct acaacatccc cttcctctgg
     2521 ttccccgacc tttccggccc cgaccccctc ttcatcctgc ccttcgtcat cggcgcgacc
     2581 aatttcttgc agcaaaagct gatgccgatg cagggtgacc ccgcccagca gaagatgatg
     2641 ctctacctga tgccgggtat gttcatcgtg atgatgctgt ttttgccgtc gggcctcggc
     2701 gtttacatgt tcacgaacgg cttgctcggc atcgcgcagc agcaattggt ggaacggcac
     2761 gccaagcgcg cggtcgcgca ggggaaaaag gcttgaacgc cgcgcaattt gcccggcccg
     2821 ccgcggactt gcgcgacgag tgagacggaa atacgtttcg ggcccaggcg gcgcctggcg
     2881 atgcccgcgc gccccccacc aagcactcat cgccgccgag cggcgctcac gagatccgga
     2941 ctagcagatg gacaacgacg aacacatcaa acacgacgac ttgggcagcg cggagcacga
     3001 ggcggagacc agcgaaggcg cgggcgaacc gcgcgacgcg gaggagca
//
LOCUS       DATIML010000446         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2109164, whole genome shotgun sequence.
ACCESSION   DATIML010000446 DATIML010000000
VERSION     DATIML010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2109164"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VLJ38_07730"
     CDS             <1..285
                     /locus_tag="VLJ38_07730"
                     /inference="COORDINATES: protein motif:HMM:NF019140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RuvA C-terminal domain-containing protein"
                     /protein_id="HSU39440.1"
                     /translation="LCGAHHRASHAGKLSSEGTPSAGLRFLHADGTPYGHAPSPAIAE
                     LRARAYRALTRLGFGESEAKWALARAPLTANVTLEDLIRQTLRELAGERH"
     gene            complement(442..1110)
                     /locus_tag="VLJ38_07735"
     CDS             complement(442..1110)
                     /locus_tag="VLJ38_07735"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: protein motif:HMM:NF014233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HSU39441.1"
                     /translation="MESKHSDWILLTKIGFPCIVGMNDDELLTPQALELELAIGLDLD
                     AAFGGELAQSVHYVGALDQVQFIAEEGRWRLLESLAGAIARHLLREPAAGEGRAAIER
                     VRVRVGKPGYLAGRAQPFVEVARDKSWFAVASSAPEPGKARVLELLRTRHSGAYHVDL
                     GPGAEFALPDGVCAFVLAGRLERDNGRELTRGATLRGGESATNARDGEARLLAVGRPL
                     LTAI"
     gene            complement(1138..>1615)
                     /locus_tag="VLJ38_07740"
     CDS             complement(1138..>1615)
                     /locus_tag="VLJ38_07740"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU39442.1"
                     /translation="LFETKPSPGEIEERVDQALLAVNIKPKEVEGKYPFELSGGQMQR
                     MLLARIFILKPQVLIADEPTSMVDACSRASILDYLLKLKEELSMTIVFVTHDIGLAYY
                     ISDSLYIMHKGKIVDRGTPDDVIKHPTSDVTKQLLTDIPDVHREWIARDAPVHAAE"
BASE COUNT          253 a          568 c          511 g          283 t
ORIGIN      
        1 ctgtgcggtg cgcaccaccg tgcaagtcac gccggaaagc tttcgagcga aggaacgcca
       61 tccgcgggtc tccgctttct gcacgctgac ggcactcctt acggacatgc accctcgccc
      121 gctatcgcgg agctacgtgc gagggcctat cgcgccctca ctcgcctcgg cttcggcgag
      181 tcggaggcga aatgggcgct cgctcgtgct cccctcaccg ccaacgtcac cctcgaagac
      241 ctcatccgcc aaacgctgcg cgagctcgcc ggagagcggc actaaattac ggctcgcgcg
      301 tcgggcgccg cgctccggtg tggctcatgg tctctactca gggcgccgtc gtatcgcgca
      361 attctgcgcc gcggcgcacc cgcccgatgt cgcccgatgt cgcccgatgt cgccgcgcca
      421 ccgcgcagcg ccaacacacc gtcaaatcgc ggtcagcaac gggcggccca cggcgagcag
      481 gcgcgcttcg ccgtcgcgcg cgttcgtcgc gctttcgccc ccgcgtagcg tcgcaccacg
      541 cgtgagctcc cgaccgttgt cgcgctcgag ccgaccggcg aggacgaacg cgcacacgcc
      601 gtccggtagc gcgaactcgg cccctggacc caagtccacg tggtacgcgc cgctgtgccg
      661 cgtgcgcaaa agctcgagca cgcgggcttt ccctggctcc ggcgcgctcg acgcgacagc
      721 gaaccacgat ttgtcgcgcg cgacttcgac gaacggctgc gcgcgcccgg cgaggtaccc
      781 cggtttgccg acgcgcacgc gcacgcgctc gatcgccgcg cgcccttcgc ctgcggcagg
      841 ttcgcgcaag agatgacgcg cgatggctcc cgcgagcgac tcgagcaagc gccagcgccc
      901 ttcttccgcg atgaattgca cctgatcgag cgcccccacg taatgcaccg actgcgcaag
      961 ctcgcctccg aacgccgcgt ccagatcgag accgatagcg agctcgagct cgagcgcttg
     1021 gggcgtgagc agctcgtcgt cgttcatccc cacgatgcag gggaagccga tcttggtgag
     1081 caagatccaa tccgaatgct tgctctccac ggcggctcct cgctgacggt tcggaggcta
     1141 ctcggccgcg tgcaccggag cgtcgcgcgc gatccattcg cggtgcacgt ccgggatgtc
     1201 ggtgagcagc tgcttggtca cgtcgctcgt cgggtgcttg atcacgtcgt cgggcgtgcc
     1261 gcgatcgacg attttgccct tgtgcatgat gtagagcgaa tcggagatgt aatacgcgag
     1321 gccgatgtcg tgcgtgacga acacgatcgt catcgagagc tcttctttga gcttcagcaa
     1381 gtagtcgagg atgctcgcgc ggctgcacgc gtcgaccatg ctggtcggct cgtccgcgat
     1441 cagcacctgc ggcttcaaaa tgaagatgcg tgcgaggagc atgcgctgca tctggccgcc
     1501 ggagagctcg aacgggtact tgccctcgac ttctttcggc ttgatgttga cggccagcag
     1561 ggcctgatcg acgcgttcct cgatttcccc tgggctcggc ttggtttcga acagc
//
LOCUS       DATIML010000447         3243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1247778, whole genome shotgun sequence.
ACCESSION   DATIML010000447 DATIML010000000
VERSION     DATIML010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1247778"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..851
                     /locus_tag="VLJ38_07745"
     CDS             <1..851
                     /locus_tag="VLJ38_07745"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39443.1"
                     /translation="TEGVGTTISIAFPIAKRPSQLPAPLSRPPRSGTETILLVDDDPL
                     VRLTVENYLEALGYRALSAANAEEAIGYCEDANLVIDLMITDIMMPDMLGSELSREIE
                     QRKKTFSAIYMSAHPRDELVRDGHIEPEALLLAKPFDANALGEAIATALEQKRRVPFG
                     QGRRTLVIDDDPDIADGLGELLELEQFEVRVAHGAETALALAGDFQPQIVMCDVELGS
                     GMNGYELGIALRRIPGLADTYFIALSGHTPSDIREQALEAGYARVLGKPLDLETLRRV
                     LTDARP"
     gene            1037..2392
                     /locus_tag="VLJ38_07750"
     CDS             1037..2392
                     /locus_tag="VLJ38_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HSU39444.1"
                     /translation="MTMRSAPTHTESPSESKRPKVDAPSGKLGVLLPGMGAVATTFIA
                     GCLLARRGLGQPFGSITQLGTIRLGKRNEGRVPRISDFVPLAGLSDLVFGTWDIFPDD
                     ALTVARESKVIEERHITPIADELGKIVPMAGAFYQEDVKRLRGTHVKAARNKAEMVEQ
                     LREDIRRFKREQGVERAVAVWCGSTERFVEPNAAHESIESFEKALAANDPSITGSALY
                     AWACLQERVPFANGAPNLSVDFPAAWELARERNVAIAGKDFKTGQTLMKTVLAPAFKA
                     RALGLNGWFSTNILGNRDGEVLDEPENFHSKEVSKLGVLEHILEPERYPSLYGEMYHK
                     VRIEYYPPRGDAKEGWDNIDIFGWLGYPMQIKIDFLCRDSILAAPLVLDLALFMDLAQ
                     RSNLSGIQEWLSFFFKSPMHRADLYPEHDLFIQSMKLKNTLRWLMGEELITHLGRDYY
                     D"
     gene            2447..>3243
                     /locus_tag="VLJ38_07755"
     CDS             2447..>3243
                     /locus_tag="VLJ38_07755"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSU39445.1"
                     /translation="MAAIVSILGGRLSALDRVWWSIAPALALAALFLLCLLAYGVRTL
                     VVGRYHDEEMDGRGLGGLTTARMRHFAAWVMRPLWVALALVDVPPNAITTLSVALAAG
                     SGLAAAVGHFALAGWVFLMAGTLDFLDGRVARVTGRATPGGAALDSVLDRYCESALLV
                     GLAWYYRSSWALLPVLLALTGSLLVPYVRARGEALGARMNDVGFMQRPERIVVLGASV
                     AFAPIPEALLSPYDPHPPHRLAMAGLVLLAATSHVTALQRLARLLRAL"
BASE COUNT          543 a         1085 c         1033 g          582 t
ORIGIN      
        1 gcaccgaagg cgtcggcacg accatcagta tcgcgtttcc gatcgccaag cggccgtcgc
       61 agcttccggc gccgctctcg cgaccgccgc gcagcggcac ggagaccatc cttttggtcg
      121 acgacgaccc gctcgtgcgt ctcaccgtcg aaaattattt ggaagcgctc ggctatcgcg
      181 cgctctcggc ggccaacgcc gaagaggcca tcggttattg cgaggatgcg aatctcgtga
      241 tcgatctcat gatcaccgac atcatgatgc cggacatgct cggcagcgag ctgagccgcg
      301 aaatcgagca acgtaagaag acgttcagcg cgatctacat gtcggcgcac ccgcgcgacg
      361 agctcgtgcg tgacggacac atcgaaccgg aggcgctgct gctggcgaaa ccgttcgacg
      421 cgaacgcact cggcgaggcg atcgcgacgg cgctcgagca gaagcggcgc gtgcccttcg
      481 gccagggacg ccgcacgctc gtcatcgacg acgatccgga catcgccgac ggcctcggcg
      541 agctgctcga gctcgaacag ttcgaggtgc gcgtcgcgca cggcgccgaa acggctctcg
      601 cgctcgccgg tgacttccag ccccagatcg tgatgtgcga cgtggagctc gggtccggca
      661 tgaacggata cgagctcggt atcgcgcttc gtcgcatccc gggactcgcc gacacgtact
      721 tcatcgccct gagcggtcac acgccctcgg acatccgcga gcaggcgctc gaagcggggt
      781 acgcgcgcgt gcttggcaag ccgctcgatc tcgagacact gcgacgggtg ttgacggacg
      841 cgcggccgta gcttcgagcc cccaacgctc ggcccgcgac cctgatcggg cgcgcgttcc
      901 ggtcacggtg tagcgccgag ctacgttctc gtacgcggcg catgcgactg cggcggtgag
      961 agcgcccaat tgcggcactc cgcttgcaca cgttgcttga catgagggcg aacggaacta
     1021 agtccagggc gacacaatga cgatgcgttc agcgccgaca cacaccgagt cgccctcgga
     1081 gagcaagcgc ccgaaggtgg acgccccgtc gggaaaactc ggggttttat tgcccggcat
     1141 gggcgccgtg gccacgacct tcatcgccgg ctgtcttttg gcccggcgcg gactcggtca
     1201 gcccttcggc tcgatcaccc agctcgggac gattcgactc ggcaaacgga atgaagggcg
     1261 cgtaccgcgc atttcggact tcgtgcccct cgcgggactt tctgacctcg tgttcggcac
     1321 ctgggatatt ttcccggacg acgcgctcac cgtcgctcgc gaaagcaagg tgattgaaga
     1381 gcgccacatt acacccatcg cggacgagct cggaaagatc gtccccatgg cgggcgcgtt
     1441 ctaccaggaa gacgtgaagc ggctgcgcgg cacccacgtg aaggcggcgc gtaacaaggc
     1501 cgaaatggtc gagcagctaa gagaagacat tcgtcgcttc aaacgcgagc agggcgtcga
     1561 gcgggcggtc gcggtttggt gcggcagcac ggagcgcttc gtcgaaccca atgcagcgca
     1621 cgagagcatc gagagcttcg aaaaggcgct cgctgccaat gatccgagca tcaccggatc
     1681 ggcgctgtat gcgtgggctt gcctgcagga gcgcgtgccg ttcgccaacg gcgcgccgaa
     1741 cctgagcgtc gatttccccg cagcctggga gctcgcgcgc gagcggaacg tcgccatcgc
     1801 cggcaaggat ttcaagacgg gccaaacgct gatgaagacc gtgctcgcgc cggccttcaa
     1861 agcgcgcgcg ctcggcctga acggctggtt ttccacgaac atcctcggca accgcgacgg
     1921 cgaggtgctc gacgagccgg agaacttcca ctccaaagaa gtgtccaagc tcggcgtgct
     1981 cgagcacatc ctggagccgg agcgctatcc gtcgctctac ggcgagatgt atcacaaggt
     2041 ccgcatcgag tattatcccc cgcgcggcga cgcgaaggag ggctgggaca acatcgatat
     2101 cttcggttgg ctcggctacc cgatgcagat caaaatcgat ttcttgtgcc gcgattcgat
     2161 cctcgcggcg ccgctcgtgc tcgacctcgc cctgttcatg gatctcgcgc agcgctcgaa
     2221 cctgagcgga atccaggagt ggctgagctt cttcttcaag agcccgatgc accgcgccga
     2281 tttgtacccc gagcacgatc tgttcattca atcgatgaag ctcaaaaaca cgctgcgctg
     2341 gctcatgggc gaggagctca tcacccacct cgggcgtgac tattacgact gatccatccg
     2401 tcatcgagac cgcgcagcag ctgagcgaag gagtgttgaa gtaatcatgg ccgccatcgt
     2461 ttcgattctt ggtggccgct tgagcgcgct cgatcgcgtg tggtggtcaa tcgcgccggc
     2521 cctcgcgctc gcggctctgt tcttgttgtg tctcctcgca tacggcgtgc gaacgctcgt
     2581 tgtcgggcgt tatcacgacg aggaaatgga cggccgcggt ctcggcgggc tcacgacggc
     2641 gcgcatgcgc cacttcgcgg cttgggtcat gcgcccgctg tgggtcgcgc tcgccctggt
     2701 cgacgtcccg ccgaacgcga tcaccacgct ttcggtcgcg ctcgcggccg gctccggcct
     2761 cgccgcggca gtcggtcatt ttgcgctcgc cggctgggtg ttcttgatgg ccggcacgct
     2821 cgactttttg gacggacgcg tcgcgcgcgt gaccggtcgg gcgactcccg gcggcgccgc
     2881 gctcgactcc gtgctcgacc gttactgcga gtcggcgctg ttggtcggcc tcgcctggta
     2941 ctaccgctcg tcctgggcgc tgttgcccgt gctgctcgcg ctcacgggtt ctctgctggt
     3001 cccctacgtg cgcgcgcgcg gtgaagcact cggcgcccgc atgaacgacg tgggcttcat
     3061 gcagcgaccg gagcgcatcg tggtgctcgg cgcgagcgtc gccttcgctc ccatccccga
     3121 agctctcttg tccccctacg atcctcatcc tcctcatcga ctcgccatgg ccggactcgt
     3181 tttgctcgcc gcaacctcgc acgtgacggc actccagcgg ctcgcgcgcc tcctgcgcgc
     3241 gct
//
LOCUS       DATIML010000448         4258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3842567, whole genome shotgun sequence.
ACCESSION   DATIML010000448 DATIML010000000
VERSION     DATIML010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4258
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3842567"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1948
                     /locus_tag="VLJ38_07760"
     CDS             <1..1948
                     /locus_tag="VLJ38_07760"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39446.1"
                     /translation="VRLKSGDADARALAAAVVAGALERLRAGKPPFATTWPEPPPPLE
                     PSNVDPRYLAEYHAAMRDRLGEIDQALASTGDPLPILEQAQRTVHSMKGASAGVGDDV
                     TAWYCHGLEARLREATADPKLAREALVELSRHRVLLALLIEDPARGLQGLRALTATLE
                     PNAGHAAKALRSPSAPHPRSTLEPPSFAPSSSPPAHPTTLPPPLRPVSSYDVPLRVSH
                     TALEHLFDRLESLDAVGDELTAAATTATRTSARLGELRLTLLDAARRIGPPRPWGPPA
                     AALVELEHTAEGLRRAAARVRLGAVTLRSGAGLVRSRTGEMREGLTALRRTSMGWVFE
                     RVSSAVVRFADGQNKLVRVEVAGADVTVDRAVAERLLEALMQLARNAVAHGIQAPAER
                     ERAGKSAPGTIWLRASREGNLLRVSVEDDGKGADAARIRRIALERGFASAELLEQTSL
                     PELMGLLLLPGMTTREGADLLAGRGIGLDLVQSAVRRFGGVVRLQNGAAGGLLALLEL
                     PSDLGLVNVLWLEERGAEFALPVNYANRVLLSQGAAVPRLSSCLGERWAAPARFVIEL
                     AGNDRGPIPVGVDHVGLIEECSLRALQPRIAAAGPFGGAVLRADGALRLVLDGPLLAA
                     RARVLAARFGPKPSSSPSSSPVRS"
     gene            1954..2409
                     /gene="rimI"
                     /locus_tag="VLJ38_07765"
     CDS             1954..2409
                     /gene="rimI"
                     /locus_tag="VLJ38_07765"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HSU39447.1"
                     /translation="MSTFVVTELEPSDFERVRELAALSGSGFDPAAELERSWAEIWVA
                     RRAAGATPLGFVLVWRAADELHVIDLAVEPESRRLGIARLLLEQVMATGRASGAAVVL
                     LEVRQSNQAALALYGALGFIRTSVRRAYYSDNGEDAIMMRLDLAIGDAP"
     gene            2406..3242
                     /locus_tag="VLJ38_07770"
     CDS             2406..3242
                     /locus_tag="VLJ38_07770"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HSU39448.1"
                     /translation="MSTRVLAKRRLVTLSLLRRESIGGLYHVLTFEDPDGGAAQPGQF
                     TMVRGAEWGDAPLLPRPMSYLTTGHTPSILIKVIGEGTLRMGRAEPGEPFTLLGPLGE
                     PWRAPTPGRRIVLVAGGVGVAPLVFLARAIAEAGGPKPIAIYGGRSARDLPLDDDLAE
                     LTELHTTTEDGSRGTRGRVTDILGDLLGPDREVFTCGPDRMMAKVAELCAARDVPCEV
                     SLETPMACGYGVCLGCPVPTMDGAYLYACTQGPCVDARRVDWSRGDHAPKKGTHLPRS
                     QT"
     gene            3239..4144
                     /locus_tag="VLJ38_07775"
     CDS             3239..4144
                     /locus_tag="VLJ38_07775"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR01037.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HSU39449.1"
                     /translation="MTRLAVEVGGLSLKNPVLTASGCFGYGLEYDDFYDVAELGGICT
                     KGLSLHPRAGNPPERICETPAGMLNAIGLANVGVEAFCRDKLPTLRERGVTVIANIFA
                     SSIADFVTITERLNRETGVAAVELNVSCPNVSEGGIEFGKDARMCGEVTRAVRSVTKL
                     PVWVKMSPEAGNIVAVARACEEAGADAITAINTIRGMSIDVEQNKLRLANRTGGFSGP
                     ALRPIALRIVWEVAGAVSIPVIAIGGVSTTRDALEFLLAGATAVQVGTANFADPSAAK
                     RVLDGLRAHCERGNVTVKSLIGSAR"
BASE COUNT          608 a         1529 c         1484 g          637 t
ORIGIN      
        1 cgtacggctg aagagcggcg acgctgacgc gcgtgctctc gctgccgccg tcgtcgcggg
       61 ggcgctcgaa cgcttgcgcg ccggcaagcc gccgtttgcg acgacctggc cggagccgcc
      121 accgccgctc gagccgagca acgtcgatcc gcgctacctc gccgaatatc acgccgcgat
      181 gcgcgacagg ctcggcgaaa tcgaccaagc gctcgcgagc acgggcgatc cgctgccgat
      241 cctcgagcag gctcagcgca cggtgcattc catgaagggc gcgtcggcgg gcgtcggcga
      301 cgacgtcacg gcgtggtact gccacggcct cgaagcgcgc ctgcgcgaag ccacagctga
      361 cccgaagctc gcgcgcgagg cgctcgtcga gctctcgcga caccgcgtgc tgctcgcgct
      421 gctgatcgag gatcctgcgc ggggcctcca gggcctgcgc gcgctcacgg caacgctcga
      481 gccgaacgcc gggcacgcgg cgaaggcgct gcgctccccg agcgcaccgc atccgaggag
      541 cacgctggag ccgccgagct tcgcgccctc gagctcgccg cccgcgcacc cgaccacctt
      601 gccgccgccg ctgcggcccg tctcgagcta cgacgtgccg ctgcgggttt cgcacacggc
      661 cctcgagcac ctgttcgatc ggctcgagag cctcgacgcg gtcggcgacg agctcacggc
      721 tgccgcgacc accgcaacgc gcacgagcgc gcgactcggc gagctccgac tcactttgct
      781 ggacgccgca cgccgcatcg gcccgccgcg tccgtggggg ccgcccgcgg ccgcgctcgt
      841 cgagctcgaa cataccgcgg agggcctgcg ccgcgcggcg gcgcgcgttc ggctcggcgc
      901 cgtgacgctc cggagcggcg cgggcctcgt gcgctcgcgc acgggcgaga tgcgcgaagg
      961 actcaccgcg ctccgacgca cctcgatggg ctgggtgttc gagcgcgtga gtagcgccgt
     1021 cgttcgcttc gccgacgggc aaaacaagct cgtgcgcgtc gaagtcgcgg gcgcagacgt
     1081 caccgtcgat cgggccgtcg ccgagcgctt gctcgaagcg ctgatgcagc tcgcgcgcaa
     1141 cgccgtcgcg cacgggatcc aggcgcccgc cgagcgtgag cgcgcgggca agtccgcccc
     1201 cgggacgatc tggctccgcg cgagtcgcga gggcaacctc ttgcgcgtca gcgtcgaaga
     1261 cgacggcaag ggcgctgacg ccgctcgcat tcgacgcatc gcgctcgagc gtggtttcgc
     1321 gagcgccgag ctcctcgaac agacgagtct gcccgagctc atgggcctct tactgctccc
     1381 gggtatgacg acgcgcgagg gcgcggatct gctggcaggg cgcggcatcg gactcgatct
     1441 cgtgcagtcg gcggttcggc gcttcggggg cgtcgtgcgg ctgcaaaacg gcgccgccgg
     1501 cgggctcctc gcgctgctcg agctgccgag cgatctcggc ctcgtcaacg tgctctggct
     1561 cgaagagcgc ggcgcggagt tcgcactgcc cgtgaattac gcgaatcgcg tgctgctctc
     1621 gcagggagcg gcggtgcctc gcctctcgtc gtgtctcggc gagcgctggg cagcgccggc
     1681 gcgtttcgtg atcgagctcg cagggaacga ccgcgggccg attccggtag gggtggatca
     1741 cgtcggtttg atcgaagagt gcagtctgcg agcgctgcag ccgcgcatcg ccgcagcggg
     1801 cccgttcggg ggcgccgtac tccgtgccga cggtgcgcta cgactcgtcc tcgacggccc
     1861 gctgctcgcc gcgcgcgcgc gggtactcgc agcgcgtttc ggaccgaagc cgagctcctc
     1921 gccgagcagc tcgcccgttc gatcgtgacc cgaatgagca ctttcgtggt gaccgagctc
     1981 gagccatccg atttcgagcg ggtgcgcgag ctcgcagcct tgtcagggtc gggtttcgat
     2041 cccgccgccg agctagagcg atcctgggcc gagatctggg tcgcgcgccg cgcggcggga
     2101 gctacgccgc tcggcttcgt cctcgtctgg cgggccgccg acgagctcca cgtgatcgat
     2161 ctggcagtgg agccggaatc gcgccgcctc ggcatcgcac gcctgctact cgagcaggtg
     2221 atggcgaccg gcagggcaag cggcgcggcc gtcgtgttgc tcgaagtgag acagtcgaac
     2281 caggcagcgc tcgcgctgta cggcgcgctc gggttcattc gaacgagcgt gcggcgcgcc
     2341 tactattcgg ataatgggga ggatgcgatc atgatgcggc tggaccttgc tataggagac
     2401 gcgccatgag cacgcgcgtc ctcgccaagc gtcggctcgt cactctctcg ctcctcaggc
     2461 gcgagagcat cggcggcctc tatcacgtcc tcacgttcga ggaccccgac ggcggcgccg
     2521 cgcagccggg acagttcacg atggtgcgcg gcgccgaatg gggcgacgcg ccgctcttgc
     2581 cccggccgat gagctatctc acgacggggc acacgccctc gattttgatc aaggtgatcg
     2641 gcgagggcac gctccgcatg ggacgcgccg agccgggcga gccgttcacg ctgcttgggc
     2701 cgctcggaga gccttggcgt gcgccgacgc cgggcagacg catcgtgctc gtcgcgggcg
     2761 gcgtgggcgt cgcgccgctc gtgttcctcg cgcgagccat cgccgaggcg ggcggaccga
     2821 agcccatcgc gatctacggc gggcgttcgg cccgtgatct gcccctcgac gacgacctcg
     2881 ccgagctgac ggagctccac acgaccaccg aggacggctc gcgcggcacg cgcggccgcg
     2941 tgacggacat cctcggcgac ctgctcggcc ccgatcggga agtgttcacc tgcggccctg
     3001 accgcatgat ggcgaaagtc gccgagctct gcgccgcgcg cgacgttccc tgcgaggtgt
     3061 cgctcgagac gccgatggca tgcggctacg gcgtgtgcct cggctgtccc gtgccgacca
     3121 tggacggcgc ctacctctac gcctgcacgc agggaccgtg cgtcgatgcg cggcgcgtcg
     3181 attggtcgcg cggcgatcac gcacccaaaa aaggcactca cctcccgcgg agccaaacat
     3241 gacgcgcctc gccgtcgagg ttggcggcct ctcgctaaaa aacccggtgc tcacggcgtc
     3301 gggttgcttc ggttacggcc tcgaatacga cgacttctac gacgtggccg agctcggcgg
     3361 catctgcacc aagggcctga gcctccaccc gcgcgccggc aatccccccg aacgtatctg
     3421 cgagacaccc gccggcatgc tcaacgccat cggactcgcc aacgtcggcg tcgaggcctt
     3481 ctgccgcgac aagctgccga ctttgcgcga gcgcggcgtg accgtgatcg ccaacatctt
     3541 cgcgagcagt atcgcggact tcgtcaccat caccgagcga ctcaaccgcg agaccggcgt
     3601 cgccgccgtc gagctcaacg tgtcatgtcc gaacgtgagc gagggcggca tcgagttcgg
     3661 caaggacgcg cgcatgtgcg gtgaagtcac gcgcgccgtc cgctcggtga cgaagctgcc
     3721 cgtctgggtg aagatgagcc ccgaggccgg caacatcgtg gccgtcgcgc gcgcgtgcga
     3781 agaagccggg gcggacgcca tcacggccat caacacgatc cgcggcatgt cgatcgacgt
     3841 ggagcaaaac aagctgcggc tcgccaatcg cacgggcggc ttcagcggcc cggcattgcg
     3901 tcccatcgcg ctccgcatcg tctgggaagt cgcaggcgct gtgtcgattc ccgtcatcgc
     3961 catcggcggc gtctcgacga cacgggacgc gctcgagttc ttgctcgctg gtgcgacggc
     4021 cgtgcaggtg ggcaccgcca acttcgccga tccctcggcc gccaagcgcg tgctcgacgg
     4081 tctgcgggcg cactgcgagc gcgggaacgt gacggtcaag tcgctcatcg gctccgcgcg
     4141 ctgatgcgcc cgctccgttc gctcggagct ctttgcgtcg ccgccgcgac ggtcctcttt
     4201 tggctcacgg gctgcgacgc gcacggaagc ccgcctaacc ccggccccgt cgagccga
//
LOCUS       DATIML010000449         7705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2398936, whole genome shotgun sequence.
ACCESSION   DATIML010000449 DATIML010000000
VERSION     DATIML010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7705
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2398936"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1372)
                     /locus_tag="VLJ38_07780"
     CDS             complement(<1..1372)
                     /locus_tag="VLJ38_07780"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39450.1"
                     /translation="MNVETLSAELERLFDLRELGELAGSVLGTDANVLDGIGAKASFA
                     RSLAERCVERDAVDALLDVMQTSRKDEVRALRATNGTPFGVSESELRSKGFTLVADIG
                     SGPSALVQRAYYDGDLVRLRTVSGAARKDAQRYLVATRLAAHIVHPGLPEAVQAFETA
                     AGVAVAQPFQEGETLRVALKRTGPRHINEILALLHAILEPLSALHDKKLVHGALHLGN
                     VLVLDPPAASPRVLLLDAGAHLLRPSVPEAAGDFERSWLSGVAPETLRGKGVEPASDV
                     YAFGVLVYQLLTGHDPFAGASAADVVVAHLMETPEPLSFAAPRGAGPDVDAFVQSLIE
                     REPERRPRDASELLEALRRVWRASTRPPSWVSDDRLDGRFAILAENPFDEGEAAALEA
                     SVDLGADAERVAQGFVDTVGVIEERGGSERAVPRLLTRAARLFETANELSRAEGLYER
                     LVELDAQ"
     gene            complement(1440..4025)
                     /locus_tag="VLJ38_07785"
     CDS             complement(1440..4025)
                     /locus_tag="VLJ38_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39451.1"
                     /translation="MLRSLGLSIGALGLFAACGSPPAPVEPRVHRVTPRPAPSALAAN
                     VPALHSTLITKVPDGTFGPYVGQGRDDSLVAWAAAEGEQRGWYVVPVSPAGALRGAPK
                     RIADAPPEVGVVVVRGRADGPGFTVVSTRRTALSEWVEVMFVGENGQLLAGPRPLAEV
                     RGSALWVEVVPMGERRLVLWAQPKDQLADIDGVVLNARGEPEADAALFASGMKAWQAV
                     AFGGGAALGTVSGDGRVAVTFVEGRDGAKSRPLVVSSAGHAQEDFDLALIDKSLLVAW
                     SDGRDGDNRVYRSVIGPDRAITVPEAPLTPPLGEQALVRAVSRPGATRAWVAWESPAA
                     RAGEARAFDVTSVDAGGHVSPERGRVELESDDAAVPEFAALADGVAALTLASECPRQG
                     DCDDGDVMPTFVRFGPKLEVLASEPLRLEGLDGAPAELGWELSCREKLCFALAALGDA
                     PAPVLLAALERRSDSWRPAGRQITAEAPPRIRENRVLAKTDPLSDLALTKVGQGSLAA
                     YLTDFDPGTPWVKLKHAAPDGRLEPLRAKLALIGLRADGTLLAPEQPLSLRAHSLGGV
                     TLSPGAPGTPVLAAWTGLDAGQPQVFLTLVGPDGTHRSQRMLTHKSGDSTDVAATAVG
                     KGWLVAWVDERDHDPEVYATRVDDKLSRIGNEHRLTSAPGPATQVALAALGETAVVAW
                     ADARNPSEPGEADIFVERVATRDATPIGGEKRVLATRGHSFAPALARFGTGLVLVWLE
                     RGSPDAPDSAGIMLQDLDAAGELVGEARRLALAEGEPAALALDCVADTCHLVVGARAG
                     DDAMLLASSFRKRGEPVPLKRVASLGSRSAAGIPLALAGEELLYADMNDDGAWRVRRA
                     LLDWP"
     gene            4077..5735
                     /locus_tag="VLJ38_07790"
     CDS             4077..5735
                     /locus_tag="VLJ38_07790"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39452.1"
                     /translation="MTLAQRLLFAIAAVTIATAALAGFAVREAWRRTEEARFEQEFSD
                     AKRLLARELAAEPARMSALLEPVCAHDPIVDSALVGLRAGDLDERRLSIGLRVPELGR
                     ALELDELVLVTSRGELLGALGERPGAARQKELALRIARGGPAAVRDAEPLAFEFVCRR
                     VDGASWVGLYAARHLDPLLARVGQAYDFELTRGPPSGNSRVLSEAVELPELQGVAISA
                     SRPRLKLVAALQTLDVKLFAIGAAALAGASVFAFLLARGLARPIVEMSRQAREVVGGE
                     PKPVAPGGGTELVEFAASFNQAIADLTQLRKRLAVTERIAARREIARRVAHEIKNPLA
                     PIRAAIETLRRLRARGDVAFDDYFDEATRTVLDEVLRISNIVSEFTRFARLPPPRPVA
                     TDLAEVARSVVALHAGHGTPLTLVGAARAELVADRDQLVQVLVNLVQNALDAVKGSAD
                     PRVVVEVVAAGDKVRLAVRDNGPGVSAEVASRLFEPYLTTKPEGTGLGLAIVERIVVE
                     HGGQIALERAPEGGAAFVVTLPVTGPTLLPEQNVPASEADGMGV"
     gene            5886..7496
                     /locus_tag="VLJ38_07795"
     CDS             5886..7496
                     /locus_tag="VLJ38_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSU39453.1"
                     /translation="MDSLTPRQVLGMVAVFATFIVCMALGTFDQRALMLTGLVALVGI
                     GAIAYGGSGGMSRSTLDRLQTAARQVFDGQRPTAPAGATADLLRIYESLGELADAHSQ
                     ALASNNRSRDALNQTAQSLMDALRQLGSGVSTQVAAGEEVARYVRETTDALRAIGQNV
                     EVLATSAEESGSSIMEMTATNETVAENIVELAGSVRETVASIEEMAYSIKEVAKNVDA
                     LSLTAEETSSSMNEMDVSIDQVQSNANETARLSEEVAQDAERGAEAILKTIGEIYRIK
                     ESSQEAVAVISNLGSRIDAIGQILNVIDDVAEQTNLLALNAAIIAAQAGEHGKGFAVV
                     ADEIKDLAERAGASTKEIADLIKTIQSESKNAISAVERGAQNVDRGVEVSNEAERALK
                     KILESSQKSTNMVRAIARATVEQAKGSKQVTDAIGRIAGTVQQIAAATAQQARGSELI
                     MRSGEKMRTIAQQVERSTQEQSRGSRQITQAMESINSMVGEISNAQRTQVRGAERGLG
                     LVAQLDDAAKKQDTALRDLAVQAERTKK"
BASE COUNT         1238 a         2772 c         2649 g         1046 t
ORIGIN      
        1 cttgcgcgtc gagctcgacc agccgctcgt agagtccctc ggcgcgcgag agctcgtttg
       61 ccgtctcgaa cagacgtgcg gcgcgcgtga gcaggcgcgg cacggcgcgt tcggagccgc
      121 cgcgctcctc gatcacgccg acggtgtcga cgaagccctg agccacgcgc tcggcgtccg
      181 cgccgagatc gacgctcgct tcgagcgccg cggcctcacc ttcgtcgaac gggttctcgg
      241 cgagtatcgc gaagcgaccg tcgagccgat cgtcgctcac ccagctcggc gggcgcgtgg
      301 acgcgcgcca aacgcgccgc agggcttcga gcagctcgct cgcgtcgcgc ggacggcgtt
      361 cgggttcgcg ctcgatcagc gactgcacga aggcgtcgac gtccgggccc gccccgcgcg
      421 gcgccgcgaa cgacagcggc tcgggcgtct ccatcagatg cgcgacgacg acgtcggccg
      481 cgctcgcgcc cgcgaacgga tcgtgtcccg tgagcagctg atagacgagc acgccgaacg
      541 cgtacacgtc gctcgccggc tcgacgccct tgccgcgcaa cgtctccggc gcgacgccgg
      601 aaagccagct gcgctcgaag tcgccggctg cttccggcac gctcggacgc aagaggtgcg
      661 cgcccgcgtc gagcaggagc acgcgcggtg aagcggcggg cggatcgagc acgagcacgt
      721 tgccgaggtg cagcgcgccg tgcacgagct tcttgtcgtg cagcgccgag agcggctcca
      781 aaatcgcgtg gagcagcgcc aggatctcgt tgatgtggcg gggacccgtg cgcttgagtg
      841 cgacgcgcag cgtctcgcct tcctgaaacg gctgcgcgac ggcgacgccc gcggccgtct
      901 cgaacgcttg cacggcctcg ggcaaaccgg ggtgcacgat gtgcgcggcg agccgcgtcg
      961 cgacgaggta gcgctgcgcg tccttgcgcg cggcgccgct caccgtgcga agccgcacga
     1021 gatcgccgtc gtagtaggcg cgctgcacca aggcgctcgg ccccgaaccg atgtccgcga
     1081 cgagcgtgaa gcctttgctg cgaagctcgg actcggacac tccgaacggc gtgccgttgg
     1141 tggcgcgcag cgctcgcacc tcgtctttgc gcgaggtctg catcacgtcg agcaaggcat
     1201 cgacggcgtc gcgttcgacg cagcgctcgg cgagcgaacg ggcaaacgac gccttggcgc
     1261 cgatgccgtc cagcacgttc gcgtccgtgc cgagcacgga tcctgcgagc tcaccgagct
     1321 cacgcaggtc gaagaggcgt tccagctcgg cgctcagggt ttcgacgttc aacgacaaat
     1381 gctcgatccc ggggctcggc cgccggtgcg cccggcgggg acccggagcc taccatccat
     1441 cacggccagt cgagcagcgc tcggcgcacg cgccaagctc cgtcgtcgtt catgtccgcg
     1501 tagaggagct cttcgcccgc gagcgcgagc ggaatccccg cggcgctgcg ggatccgagt
     1561 gacgcgacgc gcttgagtgg aaccggttct ccacgctttc ggaacgaact cgcgagcagc
     1621 atggcgtcgt cgcccgcgcg cgcgccgacg acgaggtggc aggtatccgc gacgcaatcc
     1681 agggcgagcg ccgccggttc gccctcggcg agcgcgaggc gccgagcttc ccccacgagc
     1741 tcgcccgccg cgtcgaggtc ctgcagcatg atgccggcgc tatcgggcgc gtcggggctg
     1801 ccacgctcga gccagaccag cacgagtccc gtcccgaagc gcgcgagcgc cggcgcgaag
     1861 gaatggccgc gcgtcgcgag cacgcgcttt tcgccgccga tcggcgtggc gtcgcgcgta
     1921 gccacgcgtt cgacgaaaat gtcggcctcg cccggctccg acggattacg cgcatcggcc
     1981 caagccacca cggccgtttc cccgagggcc gcgagcgcca cctgcgtcgc cggaccgggg
     2041 gcgctcgtca ggcggtgctc gttgccgatg cgcgagagct tgtcgtcgac gcgcgtcgcg
     2101 taaacctccg ggtcgtggtc gcgctcgtcc acccaggcga cgagccaacc cttgccgacg
     2161 gccgtcgcgg cgacatcggt cgagtctccg ctcttgtgcg tgagcatgcg ctgcgaccgg
     2221 tgagtgccgt ccgggccgac caacgtgaga aatacctgcg gctggccggc gtcgaggccc
     2281 gtccacgcgg cgagcacggg cgttccgggc gcccccggcg acagcgtcac gccgccgagc
     2341 gagtgcgcgc gcagcgacag cggctgttcg ggcgcgagca gcgtcccgtc agcgcgcagg
     2401 ccgatgaggg cgagcttcgc gcggagcggt tcgagccgtc cgtcgggggc ggcgtgcttg
     2461 agctttaccc agggcgtccc tggatcgaag tcggtgaggt acgcggcgag cgagccctgg
     2521 ccgaccttcg tgagcgcgag gtccgagagc ggatcggtct tggcgagcac gcggttttcg
     2581 cggatgcgtg gcggcgcttc ggccgtgatc tggcgccccg cgggtcgcca gctgtccgag
     2641 cggcgctcga gcgccgcgag cagcaccggc gctggagcgt cgccgagcgc cgccagcgcg
     2701 aagcagagct tttcgcggca ggagagctcc cagccgagct cggccggcgc accgtcgagt
     2761 ccttcgagcc ggagcggctc ggaagcgagc acctcgagct tgggcccgaa gcgcacgaac
     2821 gtcggcatca cgtcgccgtc atcgcagtcg ccttgccgcg gacactcgct cgcgagcgtg
     2881 agcgcggcca cgccgtcggc gagggctgcg aattccggca cggccgcgtc gtccgactcg
     2941 agctccacgc ggccgcgctc gggcgatacg tggccacctg cgtcgaccga cgttacgtcg
     3001 aaggctcgtg cctcgcccgc gcgtgccgca gggctttccc acgcgaccca ggcgcgcgtc
     3061 gcacccgggc gtgacacggc gcgcacgagc gcttgctcgc cgagcggcgg cgtgagcggt
     3121 gcctccggca ccgtgatcgc gcgatcgggg ccgatcacgc ttctgtacac gcggttgtcg
     3181 ccgtcgcggc cgtccgacca cgcgacgagc agcgatttgt cgatcagcgc caaatcgaaa
     3241 tcttcttggg cgtgacccgc cgagctcacg acgaggggcc gcgacttcgc gccgtcgcgg
     3301 ccttcgacga aagtcaccgc cacgcggccg tcgccgctca ccgtgccgag cgccgcgccg
     3361 ccaccgaacg cgacggcctg ccatgccttc atcccgctcg cgaacagcgc cgcgtcggct
     3421 tcgggctcac cgcgcgcgtt cagcacgacg ccgtcgatat cggcgagctg gtccttcggc
     3481 tgcgcccaga ggacgagccg tcgctcgccc atcggcacga cctccaccca aagggccgaa
     3541 ccgcggacct cggcgagcgg ccgcggcccg gccagaagct gcccgttttc accgacgaac
     3601 atcacttcga cccactcgga cagcgccgtg cggcgcgtgc tcacgaccgt gaacccgggt
     3661 ccgtcggccc gaccgcgcac gacgacgacc ccgacttcgg gcggcgcgtc cgcgatgcgc
     3721 ttcggcgcgc cgcgcagcgc gccggccggg ctcacgggca cgacgtacca gccgcgttgc
     3781 tcgccttccg ccgccgccca cgcgacgagc gagtcgtcac ggccttgacc gacgtacggc
     3841 ccgaacgtgc cgtccggcac cttcgtgatg agggtcgaat gcaaggccgg cacgttcgcg
     3901 gcgagggccg acggcgccgg ccgcggcgtc acgcgatgga cgcggggctc gaccggcgcg
     3961 ggcggtgagc cacacgcggc gaacaggccg agcgcgccga tcgagagtcc gagactccgc
     4021 aacatgaacc acccgctacc acgtcgcggg gcgaagacga gatagaatga acacgcgtga
     4081 ctctcgccca gcgcctgctc ttcgcgatcg cggccgtcac catcgccacg gcggcgctcg
     4141 ccggcttcgc cgtgcgcgag gcgtggcgac gcacggaaga agcgcgcttc gagcaggaat
     4201 tcagcgacgc gaagcgcctg ctcgcgcgcg agctcgcggc cgagcctgcc agaatgtcag
     4261 cgctgctcga gcccgtctgc gcgcacgatc ccatcgtcga tagcgcgctc gtcgggctgc
     4321 gcgcgggcga tctcgacgaa cggcgcctgt cgatcggctt gcgcgtgccc gagctcggcc
     4381 gagcgctcga gctcgacgag ctcgtgctcg tgacgtcgcg cggcgagctc ctcggcgcgc
     4441 tcggagaacg cccgggcgcg gcgcgtcaaa aggagctcgc ccttcgcatc gcgcgcggtg
     4501 gccccgccgc cgtgcgcgac gcagagccgc tcgccttcga gttcgtgtgc cggcgcgtcg
     4561 acggcgcgag ctgggtcggc ctctacgcgg cgcgccatct cgatcccctg ctcgctcgcg
     4621 tcggccaggc atacgacttc gagctcacgc gcggtccgcc gagcgggaac tcgcgcgtgc
     4681 tcagcgaagc ggtcgagctc cccgagctcc aaggggtcgc catcagcgcg tcgcggccgc
     4741 ggctgaagct cgtggccgcg ctgcagacgc tcgacgtcaa gcttttcgcc atcggcgccg
     4801 cggcgctcgc gggcgcgagt gtgttcgcgt tcttactcgc gcgcggactc gcgcggccga
     4861 tcgtggagat gtcacgccag gcgcgtgaag tcgtcggcgg cgagcccaag ccggtcgcgc
     4921 ccggcggagg cacggagctc gtcgagttcg ccgcctcctt caaccaagcc atcgccgatc
     4981 tcacgcagct ccgaaaacga ctcgccgtga ccgaacgcat cgcggcccgc cgcgagatcg
     5041 cgcgccgagt cgcgcacgaa ataaagaatc cgctcgcgcc gatccgggcc gcgatcgaaa
     5101 ccttgcgccg tctgcgcgcc cgcggcgacg tggccttcga cgactacttc gacgaagcca
     5161 cgcgcaccgt gctcgacgaa gtcttgcgca tcagcaacat cgtgagcgag ttcacgcgct
     5221 tcgctcggct gccgccgcca cgacccgtcg cgaccgacct cgccgaagtc gcccgctccg
     5281 tcgtcgctct gcacgcggga cacggcacgc ccctcacgct cgtcggagcc gcgcgcgccg
     5341 agctcgtcgc cgaccgcgat cagctcgtgc aggtgctcgt gaacctggtt caaaacgcgc
     5401 tcgacgcggt caagggcagc gccgatcccc gagtcgtcgt cgaggtcgtg gccgcgggcg
     5461 acaaggtacg cctggccgtc cgcgacaacg gtcccggcgt gagcgccgaa gtcgcgagcc
     5521 gcctgttcga gccttatcta acgaccaagc ccgaaggcac cgggctcggg ctcgccatcg
     5581 tcgagcgcat cgtcgtggaa cacggcggac aaatcgcgct cgaacgtgct ccggagggcg
     5641 gcgcggcctt cgtagtcacc ctcccggtca cggggcccac gcttttaccc gagcagaacg
     5701 tgcccgcgag cgaagcggac ggcatgggcg tttagcgcgc aattatccga tgtaaggcag
     5761 cgtgggccgg tggaggcggc cgaagtctca gaaaaaccgc ggttcggcac ttgtgagtca
     5821 gggcacggtc tgactacgat ttcgctgcgc tcccggggtc aaacgccgcg tgggcacgag
     5881 ttgccatgga cagccttact ccgcgtcagg tcctcgggat ggtcgccgtc ttcgccacgt
     5941 tcatcgtgtg catggcgctc ggcaccttcg atcaacgagc gctcatgctc accgggctcg
     6001 tcgcgctcgt tggcatcggg gccatcgcgt acggcgggag cggcggcatg tcgcgcagca
     6061 cgctcgaccg gctccagacg gcggcgcgcc aggtattcga cggccagaga ccgaccgccc
     6121 cggccggcgc gaccgccgac ctcttgcgca tctacgagtc gctcggtgag ctcgccgacg
     6181 cccactcgca agcgctcgcc tccaacaatc gctcgcgcga cgcgctcaac cagaccgcgc
     6241 agagtctgat ggacgcgctg cgccaactcg gttcgggcgt gagcacccag gtcgccgcgg
     6301 gcgaagaggt cgcgcgctac gtgcgcgaga ccaccgacgc gctgcgagcc atcggacaga
     6361 acgtcgaggt actcgcgacg agcgccgaag agtccggctc gtcgatcatg gagatgaccg
     6421 cgaccaacga aaccgtcgcg gaaaacatcg tcgagctcgc gggcagcgtg cgcgaaaccg
     6481 tcgcctcgat cgaggagatg gcctactcga tcaaggaagt cgccaagaac gtcgacgcgc
     6541 tctcgctcac ggccgaggag accagctcga gcatgaacga gatggacgtg tccatcgacc
     6601 aggtgcagtc gaacgccaac gagacggcgc gcctgtccga agaagtggcg caggacgcag
     6661 agcgcggcgc ggaagcgatc ctaaagacca tcggcgagat ttatcgcatc aaggagagca
     6721 gccaggaggc cgtggccgtc atctcgaacc tcggctcgcg catcgacgcc atcggacaga
     6781 tcttgaacgt catcgacgac gtcgccgaac agacgaactt gctcgccttg aacgccgcca
     6841 tcatcgccgc gcaagccggc gaacacggca agggcttcgc cgtcgtcgcc gacgagatca
     6901 aagatcttgc cgagcgcgcc ggcgccagca ccaaagaaat cgccgatctc atcaagacga
     6961 ttcagtccga gagcaagaac gcgatttccg ccgtggagcg cggcgcccaa aacgtcgacc
     7021 gcggcgtcga agtgtcgaac gaagccgaac gagccctcaa aaagatccta gaaagctcgc
     7081 agaagagcac gaacatggtg cgcgccatcg cgcgcgcgac ggtcgagcag gccaagggca
     7141 gcaagcaggt gaccgacgcc atcggccgca ttgcgggcac ggtgcagcaa atcgccgccg
     7201 cgacggcgca acaggcgcgc gggtccgagc tcatcatgcg cagcggcgag aagatgcgga
     7261 ccatcgcgca gcaggtcgag cgctcgacac aggagcaatc ccgcgggagc cgtcagatca
     7321 cccaggcgat ggagagcatc aacagcatgg tcggcgaaat ctcgaacgcg cagcgcacgc
     7381 aagtccgcgg cgctgaacgc ggcctcggcc tcgtcgccca actcgacgac gccgcgaaga
     7441 aacaagacac cgcgctacgc gacctcgccg tccaggcgga acgcacgaag aagtagctcg
     7501 cgcgttccgg ttgcctcctt tcgacagccg cgcgtcgatt tcgacaggtt gccgcgctat
     7561 gctgatcgaa tgagccctca cgagctcgtg gccgaacgga gcctcgcgct gcacgccgcg
     7621 gtcgcggaca gaatccgccg cgaccccagc ttgctcgacg taacgcgccg gcgagttcga
     7681 gagtggcaag cgctgggcac cgttg
//
LOCUS       DATIML010000450         2304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2688342, whole genome shotgun sequence.
ACCESSION   DATIML010000450 DATIML010000000
VERSION     DATIML010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2688342"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VLJ38_07800"
     CDS             complement(<1..402)
                     /locus_tag="VLJ38_07800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU39454.1"
                     /translation="MTTPPVVTIIGAGLAGSECALALAAAGIRVVLLEQKPVARTPAQ
                     SSDSFCELVCSNSFRGASLANAVGLLKEEMRRLGSQVMATAEETRVPAGGALAVDRDR
                     FSAAMSEKLRSHPLIEIRSELVERLPSARPLV"
     gene            complement(399..>2304)
                     /locus_tag="VLJ38_07805"
     CDS             complement(399..>2304)
                     /locus_tag="VLJ38_07805"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HSU39455.1"
                     /translation="YWNVAVGLKAKAGDLVARLAKADGDKLEVTSGEQAAAVRRDLES
                     AKFRVATVTQREQKRNAPAPYTTSKLQQDATSYLRFTTKRTMSVAQRLYEGIDLKKDG
                     GLVGLITYMRTDSVRVSPDAVTEVRAFIQAKYGARHLPDKPNVFRSRKDAQEAHEAIR
                     PTSLELAPEKVRKHLTDEQFKLYRLVWDRFVASQMAPAVYDQTGVDVEATPSVSGPRH
                     KKYGLRATGKVLKFSGWLEQYSSSQALEDGPKELAGEEDADGDAKAPAATNGNGSGNG
                     SAGIAAARAADDDEGLLPAVGEGEELKLRTPPGVSTEQKFTQPPPRFNEGSLVRELEK
                     RGIGRPSTYAEIISKVQARDYVEKLPGGQMKATDLGKIVVDGLVSTHLDFIEPSFTAK
                     MEEELDDVQAGKLGRKELLARFYGRFREVLDGAKKAKRWAPEPEATEFKCDECGSMLN
                     KRWSKNGWFLGCSAYPKCKFTRDLGKDGNAPAQPRVTDIACDKCTKPMVIKTGRYGEF
                     LSCSGYPECKNARPVPLGVPCPKDGGDLVEIRSKKRGSRSFYGCTNYPKCDFKVWQKP
                     VAEPCPLCQFPFLVQAGGQKNPKLVCGRGKECGYSRPLEDAGEAGEAGADGHVHAHGA
                     HGEHAAPAAP"
BASE COUNT          320 a          797 c          759 g          428 t
ORIGIN      
        1 gacgagtggc cgcgccgacg gcagccgctc cacgagctcg ctccggatct cgatcagcgg
       61 atgactccgg agcttctcgc tcatggcggc cgaaaagcgg tcgcgatcca ccgccagcgc
      121 cccgccggcc gggacgcgag tttcttcggc tgtcgccatc acttgcgaac cgagccggcg
      181 catctcctct ttgaggaggc cgacggcgtt ggcgagcgaa gcgccccgga acgaattcga
      241 gcacacgagc tcgcaaaacg agtcactcga ctgcgccggc gtccgcgcca ccggcttctg
      301 ctccagcaga acgacccgga tccccgccgc ggcaagcgcc agcgcgcact ccgaaccggc
      361 gaggcccgcg ccgatgatgg tgacgaccgg aggcgtcgtc acggcgcggc cggggctgcg
      421 tgttcgccgt gggcgccgtg cgcgtgcacg tggccgtcgg cgcccgcttc gcctgcctcg
      481 cccgcgtcct cgagcggacg cgagtagccg cattccttgc cgcggccgca gacgagcttg
      541 gggttcttct gcccgcccgc ctgcacgagg aacgggaact ggcagagggg gcacggctcg
      601 gccacgggct tttgccacac cttgaagtcg cacttcgggt agttcgtgca gccgtagaac
      661 gagcgcgagc cgcgtttctt cgagcgaatc tcgacgaggt cgccgccgtc cttcgggcac
      721 ggcacgccga gcggcaccgg acgcgcgttc ttgcactccg ggtagccgct gcacgagaga
      781 aactcaccgt agcggccggt cttgatcacc atcggcttcg tgcacttgtc gcaagcgatg
      841 tcggtgacgc gcggctgggc cggcgcgttg ccgtccttgc cgaggtcacg cgtgaacttg
      901 catttcgggt acgcggagca gccgagaaac cagccgttct tgctccagcg cttgttcagc
      961 atcgagccgc actcgtcgca cttgaactcc gtcgcttcgg gttccggcgc ccagcgcttg
     1021 gccttcttcg cgccgtcgag cacctcgcga aagcgcccgt aaaagcgcgc gagcagctct
     1081 ttcctgccga gcttgccggc ctgaacgtcg tcgagctcct cctccatctt cgcggtgaag
     1141 ctcggctcga tgaagtcgag gtgcgtcgag acgagcccgt ccacgacgat tttgccgagg
     1201 tcggtcgcct tcatctgccc gccgggcagc ttctcgacgt agtcacgcgc ctgcaccttg
     1261 ctgatgatct cggcgtacgt gctcgggcgg ccgatgccgc gcttttcgag ctcacgcacg
     1321 agcgagcctt cgttgaagcg cggcgggggc tgcgtgaact tctgctcggt cgagacgccg
     1381 ggcggcgttc ggagcttgag ctcctcgcct tcaccgacgg ccggcaatag gccctcgtcg
     1441 tcatcggcgg cgcgcgccgc cgcgatgccg gctgagccgt tgccgctacc gttgccgttc
     1501 gtcgccgcgg gcgctttcgc gtccccgtcg gcgtcctcct cgccggcgag ctccttcggg
     1561 ccgtcttcga gcgcttgact cgacgaatat tgctcgagcc agccgctgaa cttgagcacc
     1621 ttgccggtcg cgcgcaggcc gtattttttg tgccgcggcc cggagacgct aggcgtcgct
     1681 tcgacatcga cgccggtctg gtcgtacacg gccggcgcca tttgagatgc gacgaagcga
     1741 tcccaaacga gccgatagag cttgaactgc tcatccgtca ggtgctttcg gaccttttcg
     1801 ggggcaagct cgagtgaggt cgggcgaatt gcttcgtggg cttcctgggc gtccttacgc
     1861 gaccggaaca cgttcggctt gtcgggcagg tggcgcgcgc cgtacttcgc ctgaatgaaa
     1921 gcgcggactt ccgtcacggc gtcggggctc acacgcacgg agtccgtacg catgtaggtg
     1981 atgagaccga cgaggccgcc gtctttcttg aggtcgatac cctcgtacag gcgctgagcg
     2041 acgctcatcg tgcgcttggt ggtgaagcgc aggtagctcg tcgcgtcttg ctgcagtttg
     2101 ctcgtcgtgt aaggcgccgg cgcattgcgc ttctgctcgc gctgcgtaac cgtcgcgaca
     2161 cgaaacttgg cgctctcgag gtcgcggcgc accgccgccg cctgctcgcc gctcgtcacc
     2221 tcgagcttgt ccccgtcggc cttggcgagg cgcgccacga ggtcgccggc cttcgctttc
     2281 agcccgacgg cgacgttcca gtac
//
LOCUS       DATIML010000451         5800 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2399212, whole genome shotgun sequence.
ACCESSION   DATIML010000451 DATIML010000000
VERSION     DATIML010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5800
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2399212"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VLJ38_07810"
     CDS             <1..427
                     /locus_tag="VLJ38_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HSU39456.1"
                     /translation="HPYAAAHLQPPVLQVAVDADAAFRRIGMPEGAYPLAHACLYLAA
                     CPKSAAVKVAMSAVRASIEDRGALPVPKKLRNAVTGLMREEGYGQGYQYPPDFAGSYV
                     EGETYLPDELAGTRFYVPTEQGLEKQIKERLERLRRRDG"
     gene            420..1652
                     /locus_tag="VLJ38_07815"
     CDS             420..1652
                     /locus_tag="VLJ38_07815"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HSU39457.1"
                     /translation="MDNVTHAIAGMLVADATVEALTPRGRTPDPAFRRHARWASAIAN
                     NLPDLDFLYRGITPGRVGYLLHHRGHTHTLGVGMLLGLVSFFALTRLWRRSVVPSERL
                     PLLLLSLFGPWIHVSMDFSNNYGVHPFWPLYSGWFYGDAIFIIEPLYFAATIPALALA
                     SESRAGKMLLGAIVLVGVALAWVTRFAGVGTALALTLAAAACAGATYATPRRARTWLA
                     VALSASITLVFFTGSRVARARVRAAASPNGGQGIVLDDASLTPAPSNPFCWSAMVAGR
                     RAERYELFVATVAIAPTLVPIASCELEPTGHSLHLGLPTLPDTASVRWDAEWSHPLAE
                     LGALWRDDCDARAYLRWARLPFWIRESRDNLLLGDLRYDRSPGLDFAEIEGTIPPVNC
                     PRWVPPWLPPRHELFPFD"
     gene            1660..2970
                     /locus_tag="VLJ38_07820"
     CDS             1660..2970
                     /locus_tag="VLJ38_07820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39458.1"
                     /translation="MRLKTVIFPVLLGCQTHAAFAPPPEDTPAACEARKANLVALVAA
                     LPERSLGADLRVELPASTLGSPPAAGPVLELSETTLALDGETLDPNAWAARAKTLPAS
                     SVVYVAAAPGVTIRTLRAAVLPVPRSVKLELLVRVHSTASLPADPGTPPAAQNIAARV
                     LTERDPAVRKSLAEQGYAEFSSCPALAGAVTTAGQARPNTRWPALHAELSRALPACAC
                     SSFDANALRAVVTAEQRAGTASLGALPLDFVRDERCEASMGLRSVKRLLEQMESFDAD
                     YAGKITDDAVRFEQVITSDRLLVEFCDALPGETLASLERKKATVYFRVAGSPECEAWT
                     FAPLAPGAPMGTIRRAAGSHAPAAFHYWQAAEEISVFGPATIEPPSKPTDERDWPCRT
                     TYKLSGIDGDSVQLENGRWFFDEATCRAASDAAATGGCAVSEGG"
     gene            3020..3214
                     /locus_tag="VLJ38_07825"
     CDS             3020..3214
                     /locus_tag="VLJ38_07825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39459.1"
                     /translation="MALFTGGAQGALVTLRCPRCHEIQARARKPGGGSVKYRCRACFT
                     TFTREVGEKLAKAARKKRSI"
     gene            3251..4993
                     /locus_tag="VLJ38_07830"
     CDS             3251..4993
                     /locus_tag="VLJ38_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSU39460.1"
                     /translation="MHSPDLVFLLAAALGGALLLGLVAQRLRLPPIVGYLAAGVIVGP
                     HTPGFVANPGLASELAEVGVVLLLFGVGLEFHVEQLLAVKSVAIPAAVGQLVLVTLAS
                     AVSGHALGLPWIAAVIFGIAVSITSTVVLMRALAERGELHTPSGHLAVGWLVVEDLLT
                     VLVLVLVPVLVNGGRTSLVSSTLAAVVKIGALVAFTFIAGGRLIPRLLERVVATRSRE
                     LFTLAVLVVALGVGLGAAELFGASMALGAFLAGVVVGRSDFASRAASEALPMRDAFAV
                     LFFVSVGMLVEPSFVWREPLLVAVTLALITLLKPAISALLLVLLGRPARSALAIAAGR
                     GQIGEFSFILAALGADLGVLPARAANALTAASILSITLNPLLLRFAPHADALLPERSP
                     AEAKAQHRRSRRARVVLVGFGPIGRTLARLLEANGIEPSIIELNLDTVRELRASGGRA
                     VYGDATRPEILEEAGLRDAVGLILTAPVEGGADGVVRRARELNAGLFVIARSHYMAEA
                     PPLREAGADVVFSGEGEVALAITEYTLARLGAAPRRIERERERVHQELARQGEGTRSG
                     KRTGAAKDDGTPSA"
     gene            complement(5062..5613)
                     /gene="hpt"
                     /locus_tag="VLJ38_07835"
     CDS             complement(5062..5613)
                     /gene="hpt"
                     /locus_tag="VLJ38_07835"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HSU39461.1"
                     /translation="MREYPPAEAIRTLYTPAVIAARVGELAQTIANDYAGRSPILVAI
                     LKGSFVFASDLARALPLPLRIEFLGVRSYGSGTVSTGAVQITQDLTHPIENQDILIVE
                     DIVDTGLTLAYILGLIQARSARSVRVCALLDKPSRRRVEVPVDYVGFTVGDAFVVGYG
                     LDCAEQYRNLPALCELLEVPESP"
BASE COUNT          826 a         2078 c         1929 g          967 t
ORIGIN      
        1 ccacccgtac gcggccgcgc acctgcagcc gccggtgctc caggtcgcgg tcgatgcgga
       61 cgcggcgttc cggcgcatcg gcatgcccga aggggcgtac ccgctggcgc acgcgtgtct
      121 ctacctcgcg gcgtgtccga aatcagcggc cgtcaaagtc gcgatgagcg ccgtgcgagc
      181 cagcatcgag gaccgcggcg cgttacccgt gcccaaaaaa ctccgcaacg ccgtgacggg
      241 cctgatgcgc gaggaaggct acgggcaagg ctaccagtac ccgcccgatt tcgccggtag
      301 ctacgtggag ggcgagacgt acttgcccga cgagctcgcc ggcacgcgct tttacgtccc
      361 gacggagcag ggcctcgaaa agcagatcaa agagcggctc gagcggctgc gccgtcgcga
      421 tggataacgt cacgcacgcc atcgccggca tgctcgtcgc cgacgccacg gtcgaagcgc
      481 tcacgccccg cggtcgcacg cccgatccgg cgtttcgacg ccacgcgcgc tgggcgagcg
      541 cgatcgcgaa caatctgccg gatctcgatt ttttgtatcg cggcatcacg cccggtcgcg
      601 tcgggtacct gctgcatcat cgcgggcaca cgcacacgct cggggtcggc atgctgctgg
      661 gcctcgtgag cttcttcgcg ctcacgcggc tttggcgtcg ttcggtcgtc ccgagcgaac
      721 gcctcccgct gctgctgctt tcgttgttcg gtccgtggat ccacgtgtcc atggatttct
      781 cgaacaacta cggcgtgcat ccgttttggc cgctgtactc gggttggttt tacggcgatg
      841 ccatcttcat catcgagccg ctctacttcg ccgcgacgat tccggcgctg gcgctcgcga
      901 gtgaatcgag agccggcaaa atgttgctcg gcgcgatcgt gctcgtcgga gtggccctcg
      961 cttgggtgac ccgctttgcc ggggtcggga cggccctcgc gctcacgctc gctgccgcgg
     1021 cctgtgcagg cgcgacttac gcaacgcccc ggcgcgcacg cacgtggctc gctgtggctc
     1081 tttcggcctc gatcacgctc gttttcttca ccggctcgcg cgtggcccgc gcccgcgttc
     1141 gagcagcagc gagcccgaac ggcgggcaag gcatcgtgct cgacgacgcg agcctcacgc
     1201 ccgcgccgtc gaatccgttc tgctggagcg cgatggtggc cggccgccgc gcggaacgtt
     1261 acgagctctt cgttgcgacg gtcgccatcg caccgacgct cgtgcctatc gcgagctgtg
     1321 agctcgagcc cacaggtcac agcctgcacc tggggctacc gacgctgccg gacaccgcga
     1381 gcgtgcgctg ggacgcggag tggagtcatc cgctcgccga gctaggcgcg ctctggcgcg
     1441 acgactgcga cgcgcgcgcc tacttgcgct gggcacgctt accgttctgg atccgcgaaa
     1501 gccgggacaa cctgctgctc ggggacctgc gctatgaccg gagccccggg ctcgatttcg
     1561 cggagatcga gggaactatt ccgcccgtga actgtccgcg ttgggtgccg ccctggcttc
     1621 cgccgcggca cgagctcttc ccgttcgatt gaggtcccag tgcgactgaa gaccgtaatt
     1681 tttcccgtgc tcttggggtg tcagactcac gcggcgttcg cgccgccgcc cgaggacacg
     1741 cccgcagcgt gcgaggcgcg caaggcaaac ctcgtggcgc tcgtggcagc gctgccggaa
     1801 cgttcgctcg gtgccgattt gcgcgtcgag ctgccggcat ccacgctcgg ctcgccgccc
     1861 gcggcaggtc ccgtgctcga gctcagcgag acgacgttgg ctctcgacgg cgaaacactc
     1921 gacccgaacg cgtgggcggc ccgagcgaag accctccccg cgagcagcgt cgtttacgtg
     1981 gcggcggcgc cgggcgtgac gattcgtacg ctgcgcgcgg cggtgctccc cgtcccgcgc
     2041 agcgtgaaac tcgagctgct cgtgcgcgtg cactccacgg cgagcttgcc ggccgatccc
     2101 ggcacgccgc ccgccgcgca gaacatcgcc gcgcgcgtgc tcaccgagcg cgatcccgcc
     2161 gtgcgtaaat cgctcgctga gcagggctac gccgagtttt cgagctgccc agcgctggcc
     2221 ggcgcggtca ccactgcggg ccaggcgcgg ccgaatacgc gttggccggc gctgcacgcg
     2281 gagctttcgc gagcattgcc cgcgtgcgcg tgcagttcgt tcgacgcgaa cgcgctgcgc
     2341 gccgtagtga cggccgagca gcgcgccggc acggcgagtc tcggcgcgct gccgctcgac
     2401 ttcgtacgcg acgagcgctg cgaggcaagc atggggctgc gctcggtcaa gcgtctgctc
     2461 gagcagatgg agagcttcga cgccgactac gcgggaaaga tcacggacga tgccgtgcgt
     2521 ttcgagcaag tgatcacgag tgaccgtctg ctggtcgagt tttgcgacgc gctcccgggc
     2581 gaaacgctcg cgtccctcga acgcaaaaaa gcgaccgtgt actttcgcgt ggccggcagc
     2641 cccgagtgcg aagcctggac gttcgcgccg ctcgcgcccg gcgcgccaat ggggaccatt
     2701 cgccgcgcgg caggctccca cgctcccgcc gcgtttcact actggcaagc cgccgaggaa
     2761 atctccgtgt tcgggcctgc cacgatcgag ccccccagca agccgaccga cgagcgcgac
     2821 tggccttgcc gcacgacgta caagctctcg ggcatcgacg gcgactccgt ccagctcgaa
     2881 aacggtcgct ggttcttcga cgaggcgact tgccgcgctg ccagcgacgc ggccgcgacg
     2941 ggcggctgcg cggtcagcga gggcggctga gcgccgccgg gcccgttcgt catgacagcg
     3001 cctggagtag actcggcgaa tggcgctctt caccggcggc gcgcagggcg cactcgtgac
     3061 cctgcgctgc ccgcgttgcc acgagattca ggcccgagcg cgcaagcccg gcggcggcag
     3121 cgtcaagtac cgctgtcgcg cctgcttcac gacgttcacg cgtgaggttg gcgagaagct
     3181 agccaaggcc gcccgcaaaa agcgctcgat ttagcctgga atcgagcgag tctagcgccg
     3241 cgcttcgccg atgcactcac ccgacctcgt gttcctgctc gctgcggcgc tcggcggcgc
     3301 gctgctgctc ggcctcgtcg cgcagcggct ccgcttgccg ccgatcgtcg gttacctcgc
     3361 ggccggcgtc atcgtcggtc cgcacacgcc gggcttcgtc gccaatccgg gtctcgcgtc
     3421 cgagctcgcc gaagtcggcg tcgtactctt gctcttcggc gtcggcctcg agttccacgt
     3481 cgaacagctg ctggccgtca aatccgtcgc gattcccgcc gcagtcggac agctcgtgct
     3541 cgtcacgctc gcgagtgcag tgagcggcca cgcgctcggc ctgccgtgga tcgcggccgt
     3601 cattttcggc atcgcggtct ccatcacgag cacggtcgtc ttgatgcgag cgctcgccga
     3661 acgtggcgag ctccatacgc cgagcggcca tctcgccgtg ggctggctcg tggtcgagga
     3721 cttgctcacg gtgctcgtac tcgtgctcgt gccggtgctc gtcaacggcg gccgcacgag
     3781 tctcgtcagc tcgacgctcg cggccgtcgt gaaaatcgga gcgctcgtcg ccttcacttt
     3841 catcgcgggc ggacggctga tcccgcgttt gctcgagcgc gtcgtcgcga cgcgttcccg
     3901 cgagctcttc accctcgccg tgctcgtggt cgcgctcggc gtcggcctcg gcgcggccga
     3961 gctcttcggc gcctcgatgg cactcggcgc gttcctcgcg ggcgtcgtcg tcggacgctc
     4021 ggatttcgcg tcgcgggcgg cctccgaggc gctcccgatg cgcgacgcgt tcgcggtgct
     4081 cttcttcgtg tccgtcggca tgctggtcga gccaagcttc gtctggcgcg agccgctgct
     4141 cgtcgcagtc acgctggcgc tcatcacgct gctaaaaccc gcgatatcgg cgctgctgct
     4201 cgtcctcttg ggccgccccg cgcgctcggc gctcgccatc gccgcgggtc gcggacaaat
     4261 cggggaattc tccttcatcc tcgccgcgct cggcgccgat ctcggcgttc tccccgcgcg
     4321 cgccgcgaac gcgctcaccg cagcaagcat cctctcgatc acactgaacc ctctcctcct
     4381 gcgcttcgcg ccgcacgccg acgcactctt gcccgagcgc agccccgccg aagccaaagc
     4441 gcaacatcgc cgttcgcggc gcgcgcgcgt cgtcctcgtc ggcttcggtc ccatcgggcg
     4501 caccctcgca cgcttactgg aagcaaacgg catcgagccg agcatcatcg agctcaacct
     4561 cgacaccgtg cgcgagctcc gcgcgagcgg cggccgcgcc gtctatggcg acgccactcg
     4621 ccctgaaatc ctcgaggaag cggggttgcg agacgccgtc ggcttgattc tcacggcgcc
     4681 ggtcgagggc ggcgccgacg gcgtcgtccg ccgcgcacgc gagctcaacg ccggtctgtt
     4741 cgtcatcgct cgttcccatt acatggccga agcgccgccc ctccgcgagg ctggcgccga
     4801 cgtcgtgttc tccggcgaag gtgaagtcgc cctcgccatt accgaataca ccctcgcgcg
     4861 cctcggcgcg gcccccaggc gcatcgaacg cgaacgcgaa cgcgtgcacc aagaactcgc
     4921 gcgccagggc gagggcactc ggagcggcaa gcgcaccggc gcggccaaag acgacggcac
     4981 gccgagcgct tgagctggcc acgccctggc gcggctcacg ctcgatcaac cgcgcgcttg
     5041 gcgccgagcg tcgacgcccg attacgggct ttccggcact tctagcagct cgcagagtgc
     5101 cggcagattt cggtattgct cggcgcagtc gaggccgtag cccacgacga aggcgtcgcc
     5161 caccgtgaaa ccgacgtagt ccacggggac ttcgacgcgg cgccgtgacg gcttgtcgag
     5221 cagggcgcag acgcgaacgc tgcgcgcgct ccgcgcttgg atgaggccca agatgtaagc
     5281 gagggtgagg ccggtgtcga cgatgtcctc gacgatcaag atgtcttgat tttcgatcgg
     5341 gtgcgtgagg tcttgagtga tttggacggc gcccgtcgag acggtgcccg agccgtagct
     5401 gcgcacaccc aaaaattcga tgcgcagcgg caacggcagc gcgcgagcga gatcggacgc
     5461 gaacacgaag ctgcccttca ggatcgcgac gagaatcggg gagcgtcccg cgtagtcgtt
     5521 cgcgatcgtc tgggcgagct cgcccacgcg cgccgcgatc acggcgggcg tgtagagcgt
     5581 gcggatggct tcggccggcg ggtactcccg catgacgtcc acgtagcgag cacgggcgcg
     5641 cccgtcaacg cggcagcatc gcgagtcgca cttcgctgct ccgaccatcg gtcgtccact
     5701 cgaaactgcc cgaacggtcg agcctgaatg ccgtcacacc gtgctcgaac agccgttcga
     5761 ccgtgggcgc gtgcgggtgg ccgaaacgat ttcgcacccc
//
LOCUS       DATIML010000452         1748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1825210, whole genome shotgun sequence.
ACCESSION   DATIML010000452 DATIML010000000
VERSION     DATIML010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825210"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /locus_tag="VLJ38_07840"
     CDS             <1..898
                     /locus_tag="VLJ38_07840"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU39462.1"
                     /translation="RLDEIFRLADRISVLRDGRRVFTRPAHELTRDELVNAMVGRAEF
                     GKKSAPKQPFGATRLRVRNLTADPPRALGPLAFELAAGETLGVAGVEGSGASTLLHAL
                     FGDARGVHAELELDGARYAPDGPRAAFARGVALLASDRRESVLSELSVLHNATLSSLR
                     AWSRAGVLHDGNEREAVEPEATRIHLKSPSLATAAGALSGGNQQKTALIRCLLARPRL
                     LLLDDPTRGIDVAARADVHDLLRDIALSGTSILFRSTDLAELMALSDRVLVLARGRYV
                     ATLARSELDEARLLGLMMGGTA"
     gene            948..>1748
                     /locus_tag="VLJ38_07845"
     CDS             948..>1748
                     /locus_tag="VLJ38_07845"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU39463.1"
                     /translation="MTRFASWARLRPFVPLVAVLLVGVVLNAQGAFFEWQTHRAVLRE
                     VAVGGILASGMTVVIVSGGIDLAVGSLLGFAGVSFAWLTLTHGWPGLFAIVAVLALGG
                     VLGAVSGALVAWPRLQPFIVTLAMMVFARGLAKELSGGQKISTYVHLPDGRFESVPLP
                     RVFEALDGRVLGDNVSVVTLVFLASALVTWLILERLRIGRYLFAVGDNFEAARLSGVP
                     VRATLLFAYVLSGVFAAVAGICQAAQETHGDPETGMGYELDAIAMVVLG"
BASE COUNT          234 a          608 c          593 g          313 t
ORIGIN      
        1 tcgcttggac gaaatctttc ggctcgccga tcgcatcagc gtgctgcgtg acggacggcg
       61 tgtgttcacg cgcccggcgc acgagctgac gcgcgacgag ctcgtgaacg ccatggtcgg
      121 ccgcgcggag ttcggcaaaa aaagcgctcc aaaacagccg ttcggcgcga cccgcctgcg
      181 cgtgcgaaat ctcacggccg accccccgcg cgccttgggt ccgctcgcct tcgagctcgc
      241 tgcaggcgag acgctcggcg tcgccggcgt cgaaggttcg ggcgcgagca cgttgctcca
      301 tgcgctcttc ggcgacgctc gcggcgttca cgccgagctc gagctcgacg gcgcccgcta
      361 cgcgccggac ggtccccgcg ccgcgttcgc acgtggtgtc gcactgctcg cgagcgatcg
      421 acgcgagagc gtgctctccg agctcagcgt gctccacaac gcgacgctct cgtcgctccg
      481 cgcgtggtcg cgcgcaggcg tcctgcatga cggtaacgaa cgcgaggcgg tcgaacccga
      541 agccacgcgc atccacctga agtcgccgtc gctcgccacg gcggcgggag cgctgtcggg
      601 cggaaatcag cagaaaacag cgctcatccg ctgcttgctc gcgagaccgc ggctgctttt
      661 gctcgacgat cccacgcgcg gcatcgacgt cgccgcacgc gccgacgtgc acgacctttt
      721 gcgcgacatc gcactgagcg gcacgagcat cctctttcgc agcaccgatc tcgctgagct
      781 catggcgctc tccgatcgcg tcctcgtgct cgcccgtggc cgttacgtcg cgacgctcgc
      841 gcggagcgag ctcgacgaag cacgcttact ggggttgatg atggggggca cggcatgagc
      901 agcgcgctct gcaccgccag cacggcgacg cccgtccgag gcctcgcatg acccgcttcg
      961 cctcgtgggc aagactccgc ccgttcgtgc cgctcgtggc cgtgctgctc gtcggcgtcg
     1021 tcctgaacgc ccagggcgcc ttcttcgagt ggcagacgca ccgtgccgtc ctacgagaag
     1081 tggccgtcgg cggaattctc gcgagcggaa tgaccgtcgt gatcgtttcc ggggggatcg
     1141 atctcgcggt gggtagcctg ctcggcttcg cgggggtgag cttcgcgtgg ctaacgctca
     1201 cgcacggctg gccggggctt tttgccattg tcgccgtttt ggcgctcggg ggagtgctcg
     1261 gcgctgtttc cggagcgctc gtcgcctggc cgcgcctgca gccgttcatc gtgacgctcg
     1321 ccatgatggt gttcgcgcgc ggactcgcga aggagctgtc cggcgggcaa aagatctcga
     1381 cttacgtgca cctgcccgac ggacgcttcg agagcgtgcc gctgccccgc gtcttcgagg
     1441 cgctcgacgg ccgcgtcctc ggcgacaacg tgagcgtcgt gacgctcgtt tttctcgcga
     1501 gcgcgctcgt cacctggctg atcctcgagc ggctgcgcat cggacgctac ctcttcgcgg
     1561 tcggcgataa tttcgaggcg gcgcggcttt cgggcgttcc cgtacgggcg acgctgctgt
     1621 tcgcgtacgt gctttcgggc gttttcgccg cggtcgccgg catctgccag gccgctcaag
     1681 aaacgcacgg cgatcccgaa acggggatgg ggtacgagct cgacgccatc gccatggtcg
     1741 tgctcggg
//
LOCUS       DATIML010000453         5709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_956922, whole genome shotgun sequence.
ACCESSION   DATIML010000453 DATIML010000000
VERSION     DATIML010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5709
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956922"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VLJ38_07850"
     CDS             <1..466
                     /locus_tag="VLJ38_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39464.1"
                     /translation="EEGGERGRNYWCGTAGSTWWFYFTGSSTDELWQAYLEHCRRMLE
                     SATVRPSLVCIAHRADSPTADQRKMLAEFIRSEAARLSSLVGFALVLDSPLHILALKA
                     INWLVKKPFPETVCGSPSSAALWLGERGAPIDIKTLALSLEENVPREHLSPI"
     gene            complement(507..1208)
                     /locus_tag="VLJ38_07855"
     CDS             complement(507..1208)
                     /locus_tag="VLJ38_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39465.1"
                     /translation="MLQRYDIGNITSAKDGWWRNDQTYVVSLEETKTGEPLGGVRLQR
                     WGNGVPLPIESALAGVDRYVHAWVASFANAGVGELCGLWCSPRLKGFGIGGLLTKMGL
                     SLGPELKTRTILGLCDTRNVATNVGFGFARDPSLATEGSFEYPRPGLVAHVLRVSDSR
                     RLEGAVASHRADVESYRRSPVGVEILEAGGQYVELERDLRIGSLEAPAQRRARASRPN
                     ASREPLLFEHATETF"
     gene            complement(1294..3612)
                     /locus_tag="VLJ38_07860"
     CDS             complement(1294..3612)
                     /locus_tag="VLJ38_07860"
                     /inference="COORDINATES: protein motif:HMM:NF005901.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rv1355c family protein"
                     /protein_id="HSU39466.1"
                     /translation="MQQATLSLSSFRPNPATTLSLYRPQLLRPSDAGDRAVLEALRSE
                     RGVELHDTFREQVAGLLKSRRARRPPTEHELDVEIQRYAAGRPLAELGVWVHYPWRRS
                     LVHLLDEAEFVELRTSRNRYKITGEEQAILARRKVGVVGLSVGGQVALTLAIERSCGE
                     LRLADFDALELSNLNRLREGVFSLGVKKTTLAARSIAEIDPFLHVVCYEDGLTAQNLE
                     SFLSAGGRLDVLVEECDGLAMKLECRERARELGIPVVMEANDRATLDIERFDREPTRP
                     ILHGLLEGLDLSRVSELKTNDEKVPYLLPMVGEATMSDKLRASLLEVGESIETWPQLA
                     SDVALGAGLVANVVRRISLGQLNDSGRYFVDLEELVRDRPASAPPESGAIPRAPALGM
                     TSLGADERAPEPLPGQLMPSAAALTSLLDAAALAPSGGNEQPWRWLRARSELWLLPER
                     AFGDSLLNHRDNASFLALGAAAENLVLRAHELGFAVELEPPSAQQPQPKCRFRFFPAG
                     AAPRAEESHAWDSLAPFIAERHTNRRRGETTALASAVLAELAHPLAALPGLKLQVVTQ
                     RAAIAEVAEVAARADRIRMLHPEGHRDLVREIRWTKEEAVRERDGIDLSSMELTAAEH
                     AGLRMLRFESVAELLRSWKRGRGLERLTRNAVLASSAVGLITAPGGSIEERFLAGRAL
                     ERVWLTATRLGVSLQPHTASLFLFARALGGGGADFDADTIGELLGLQARLRGVFQPSG
                     CELFLFRLFPASEPLARSLRRPVVLGERTFEG"
     gene            4092..4808
                     /locus_tag="VLJ38_07865"
     CDS             4092..4808
                     /locus_tag="VLJ38_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39467.1"
                     /translation="MAETPLADRRGQAQAATGLSAEQRSIVAAYWFRRSEGELTSFVG
                     FQHVVADLRAEGSPAPIQELAERAVRDEYQHAVWCREWAVRFGHPEEVETRPRSREPL
                     AFRGATERENRLLRILTCCFTETVGCFILRHVRKVVTDPELRRQNLRHLADEVQHSRV
                     GWGHLATLTPAARKLIAPWVRDVLALLPQACCDGPELELEALVPFGYFTPRLLRAAHD
                     EAVRDVILPGLAHVGLGACA"
     gene            4799..5485
                     /locus_tag="VLJ38_07870"
     CDS             4799..5485
                     /locus_tag="VLJ38_07870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39468.1"
                     /translation="MRLSAADFDPPQAAHAFFHTLVVMGSALALGCGGISHDHPPSDV
                     SVGGSAGSVDGEHGDGGAATHGGGGRAASAGGGSTGTGGTLSSGAGSGNIILLPGGAG
                     GAPSGLDAGAAGELACPPEQWRCAMTLGCSGSNLPSAVDCSCDDSLPLSPEACAAGES
                     FVCRGATNDTRGYPLPRPERYECNCVASAAECQTTCNLAFGPQARCLESGQQIPTDTT
                     LCDCAMIVLR"
BASE COUNT          971 a         1941 c         1922 g          875 t
ORIGIN      
        1 tgaggagggg ggcgaacgcg gtcgtaatta ttggtgtgga accgcaggtt ccacctggtg
       61 gttctacttc acgggaagct cgacggacga gctctggcag gcctacctcg agcactgccg
      121 gcgaatgctc gagagcgcga ccgtgcgtcc gtcactcgtc tgcatcgcgc accgcgcgga
      181 ttccccgacc gcggatcagc gtaagatgct cgccgagttc atccgctcgg aagcggcgcg
      241 cttgagctcc ctcgtcggct tcgcgctcgt gctcgactcg ccgctccaca ttctcgcgtt
      301 gaaggccatc aactggctcg tgaagaaacc gttcccggaa acggtgtgcg gatcgccgag
      361 cagcgccgcg ctctggctcg gcgaacgcgg cgcgcccatc gacatcaaaa cgctcgcgct
      421 ttcgctggaa gagaacgtgc cgcgcgaaca cctctcgccg atttgaccgc cgcgcgccgc
      481 ccgccgcgtt ccagtgcgat tcgcggtcag aaggtctccg tcgcgtgttc gaacagcagg
      541 ggctcgcgcg acgcgttcgg gcgcgaggcg cgggcccggc gttgcgccgg cgcttcgagc
      601 gaaccgatgc gcagatcgcg ttcgagctcg acgtactgcc ctccggcttc gaggatttcg
      661 acaccgaccg gcgagcgccg atacgactcc acgtcggcgc gatgactcgc cacggcgccc
      721 tcgagccggc gtgaatcgga cactcgcagc acgtgcgcga ccaagcccgg ccgcgggtat
      781 tcgaacgagc cctcggtcgc gagcgacgga tcgcgcgcga aaccgaagcc gacgttcgtc
      841 gccacgttac gcgtatcgca caggcctaaa atcgtccgcg tcttgagctc gggcccgagc
      901 gacaggccca tcttcgtgag cagacccccg atgccgaaac ctttgagccg cggcgagcac
      961 cagagcccgc agagctcgcc gacacccgcg ttcgcaaagc tcgcgaccca cgcgtgcacg
     1021 tagcggtcga cgccggcgag cgccgactcg atcggcagcg gcacgccgtt accccagcgc
     1081 tgcaagcgaa cgcccccgag cggctcgccc gtcttcgtct cctcgagcga cacgacgtac
     1141 gtctggtcgt tcctccacca gccgtccttg gccgacgtga tgttgccgat gtcatacctc
     1201 tggagcacct ctgcgtggac ctcggcgctc ctgatacaat tccctacagc ctccgaggcg
     1261 cgggacacct taacgcggat gcgcagcatg agctcagccc tcgaacgtgc gttcgccgag
     1321 aacgacgggc cggcgcagcg aacgcgctag cggctccgat gccgggaaca atcgaaacag
     1381 aaacagctcg caacccgagg gctggaacac cccgcgcaag cgcgcctgca aaccaaggag
     1441 ctcccctatc gtgtcggcgt cgaagtccgc gccgccgcct ccgagcgcgc gcgcgaacaa
     1501 gaacaacgac gccgtgtgcg gctgcagcga gacgccgagg cgcgtggcgg tgagccaaac
     1561 acgttcgagc gcgcgtcctg ccaagaagcg ttcttcgatc gaaccgcccg gcgccgtgat
     1621 caggccgacg gcagaagacg cgagcacggc gttgcgcgtg agccgttcga ggcctcgtcc
     1681 ccgcttccaa ctgcgcagga gctcggcgac gctctcgaag cgcagcatgc gcaagccagc
     1741 gtgctcggcg gccgtgagct ccatgctcga cagatcgatg ccgtcgcgct cgcgcacggc
     1801 ttcctctttc gtccagcgga tttcgcgcac gagatcgcgg tgcccctctg gatgcagcat
     1861 gcgaatgcga tcggcgcgcg cggcgacctc cgcgacctcc gcgatggccg cgcgctgcgt
     1921 gacgacctga agcttcaagc cgggcagcgc tgcgagcgga tgcgcgagct cggccaggac
     1981 cgcgcttgcg agcgccgtcg tctcaccgcg ccggcgattg gtgtggcgct ccgcgatgaa
     2041 gggcgcgagc gagtcccagg cgtgagactc ctccgcacgc ggcgccgcgc ccgcggggaa
     2101 gaaccgaaag cggcatttcg gctgcggctg ttgcgccgag ggtggctcga gctccacggc
     2161 gaagccgagc tcgtgggcac gcaggaccag attctccgcc gcggcgccga gcgcgagaaa
     2221 gctcgcgttg tctcgatggt tcaagaggga gtcgccgaac gcgcgctcgg gcaagagcca
     2281 aagctcgcta cgggcgcgga gccagcgcca cggctgttcg ttaccgccgc tcggcgcgag
     2341 tgcggccgcg tcgagcaacg acgtgagagc cgcagccgac ggcatgagct gcccgggtag
     2401 cggttccggc gcgcgttcat cggcgccgag tgacgtcatg ccgagtgccg gcgcacgggg
     2461 gattgcgccc gattccggcg gcgcactcgc cggccgatcc cgcacgagct cctccagatc
     2521 cacgaagtag cgccccgagt cgttgagttg accgagagag atgcgccgca cgacgttggc
     2581 gacgagaccg gcgccgagcg cgacgtcgga ggcgagctgc ggccaggtct cgatcgactc
     2641 accgacctcg agcagcgaag cgcggagctt gtcggacatc gtggcttccc cgaccatcgg
     2701 cagcaggtag ggcaccttct cgtcgttggt cttgagctcg ctcacgcgac tcaaatcgag
     2761 accttcgagc aagccgtgca ggatgggccg cgtgggctcg cgatcgaagc gctcgatgtc
     2821 gagcgtcgct cgatcgttgg cctccatcac gaccggaatg ccgagctcgc gcgcgcgttc
     2881 gcgacactcg agcttcatgg cgagcccgtc gcactcctcg accaaaacgt ccaggcgacc
     2941 gcctgcgctc aggaagcttt cgagattttg agcagtgagc ccgtcctcgt agcaaaccac
     3001 atgcaggaac ggatcgatct cggcgatcga gcgggcggcg agcgtcgtct tcttgacgcc
     3061 gagcgaaaag acgccctcgc gcagccggtt caggttgctg agctcgaggg cgtcgaaatc
     3121 cgcgagccgg agctcaccgc agctgcgctc gatcgcgagc gtcagcgcga cctggccgcc
     3181 caccgagaga ccgacgacgc cgactttgcg gcgcgcaagg atggcctgct cttccccggt
     3241 gatcttgtaa cggttccggc tcgtgcgaag ctcgacgaac tccgcctcgt cgagcaggtg
     3301 cacgagcgag cgacgccagg ggtagtgaac ccaaacaccg agctcggcca gcggacgccc
     3361 tgcggcgtag cgctggattt cgacgtcgag ctcgtgctcc gtcggcggcc gccgcgcgcg
     3421 ccgtgacttc aggagacctg cgacttgctc gcggaaggtg tcgtgaagtt cgacgccacg
     3481 ctccgagcgg agcgcttcga ggaccgcgcg atcgccggcg tcgctcgggc gcaatagctg
     3541 cggtcgatag agcgaaaggg ttgtggccgg gttcggccta aaggaagaga gacttaaggt
     3601 ggcctgttgc atgtgaagcg gtttggagtg gaaggtcccc tccccgcccc tctgcggcgc
     3661 agacgcgcac cgccttaaga tgcgcgcgtc ttaccgaaga tcttcgcgaa gctcaacgaa
     3721 cgtttgatgg cgatttcgga acgtcgggat agcgagcgag cggctgcgtt cgcagcacaa
     3781 tcacgtcaaa aagccggact cctgtttcag cggcgtgtag cacgcgagtc gcgtgctctt
     3841 cacgccccac agggcggctg atttcgaacc gctgctcact ccacgggcag aactgagcgt
     3901 cggcccgcag atatgaacgc atccgccgtg ctgcgcgcag gcaagaccaa cgggtgatga
     3961 aggaaggaaa gcaggttcgt ccagcggagc cccctaggac accctagcga cacacgcaac
     4021 gaaaaaatca cgtaccgtcc caaacggcgg cagaatgagc cgaaccccgg gtgtcagcgc
     4081 acggcggaga gatggcggaa acacctctcg cggaccgtcg cgggcaagcg caggctgcga
     4141 cgggactgtc ggcggagcag cggagcatcg tcgcggcata ctggttccgg cgctcggaag
     4201 gcgagctcac ctccttcgtc ggctttcagc acgtagtcgc cgatttgcgc gccgaaggct
     4261 cgcctgctcc gattcaggag ctcgccgagc gcgccgtccg agacgagtac cagcacgccg
     4321 tctggtgccg cgagtgggcc gttcgcttcg gtcatccgga ggaagtcgaa acgcggccac
     4381 gcagccgcga gccgctcgca tttcggggcg cgaccgagcg tgagaaccgc ctgctgcgca
     4441 ttttgacctg ttgcttcact gaaaccgtcg gctgcttcat cctgcgccac gtgcgaaaag
     4501 tcgtgactga ccccgagctg aggcgccaaa acctgcgtca cctggctgac gaggttcagc
     4561 acagccgcgt cggctggggt cacctcgcga cgctcacgcc cgctgcccgc aagctcatcg
     4621 cgccctgggt acgcgacgtg ctcgccctgt taccccaggc gtgctgcgac ggcccggagc
     4681 tcgagctcga agcgctcgtc ccattcggct atttcacgcc gcggctcttg cgcgccgccc
     4741 atgacgaagc agtgcgtgac gtgatcctgc ccggactcgc tcacgtcgga cttggagcgt
     4801 gcgcttgagc gcggcggatt tcgacccacc gcaggcagcg cacgccttct ttcatacgct
     4861 ggtcgtgatg ggcagcgccc tcgcgctcgg gtgcggcggc atcagccacg accacccgcc
     4921 gagcgacgtg tccgtgggcg gctcggctgg cagcgtcgac ggcgagcacg gcgacggggg
     4981 cgccgccacg cacggcggcg gtggacgcgc ggcgagcgcc ggcggagggt cgacgggcac
     5041 tggtggaacg ctgagttccg gcgcgggcag cgggaacatc atcctcctgc ccgggggcgc
     5101 gggaggcgct ccgagcgggc tcgacgcggg cgccgcgggc gagctcgctt gtccgcccga
     5161 gcagtggcgc tgcgcgatga cgctcggctg ctcggggtcg aacttaccgt cggcggtcga
     5221 ctgcagttgc gacgactcgc tcccgttgag tcccgaagct tgcgccgccg gcgagagttt
     5281 tgtctgtcgc ggcgcaacga acgacacgag aggctacccc ctgccgcggc ccgagcggta
     5341 cgagtgcaac tgcgtcgcct cagcggcgga atgccaaacc acgtgcaacc tggctttcgg
     5401 tccacaggct cgctgcctcg aaagcgggca gcagatcccg accgacacga ctctttgcga
     5461 ctgcgccatg atcgttttga ggtagcgcag cgcggctgtc gtaggtgcct gcgacaacca
     5521 gcgtgcgtat tgaggacgag cactgaacct cagttggcgc caggactgcg acactccgcc
     5581 acggccgtgt gcgcggagcg ccgggtgcac gctgggtgca gcgcgtcaag actgaccgcg
     5641 acgtcatagg gcgaacatgt catggcgtgc tgagtcgcgg cgcgttgaac gaggtcctgc
     5701 gcaaagctc
//
LOCUS       DATIML010000454         3933 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2978214, whole genome shotgun sequence.
ACCESSION   DATIML010000454 DATIML010000000
VERSION     DATIML010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3933
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2978214"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1592
                     /locus_tag="VLJ38_07875"
     CDS             159..1592
                     /locus_tag="VLJ38_07875"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39469.1"
                     /translation="MTEPNRLDEVVGGKYRIVRFLASGGMGSVYEAHHTVVRRRFAVK
                     FLHHELALRRELLARFQREAEAAGALESEHVAAALDFGIAADGAPYIVLEYLVGESLE
                     HLLEREGRLPIERATNVVQQACRGVQAAHAAGIVHRDLKPHNLFVCRREDATDLVKVL
                     DFGVAKLEVVEKSAAATRTGTVLGTPSYMSPEQARGERNVGHLSDVYALGAILYELLS
                     GKKPHPGDSHNAILHHIATQPALSLALAEPSLPHALVAVVERALAGDPARRPASVEEF
                     ALELAPWARAEIWPPPDLEPSAPRHAEPSTTLPAPEPLRTTVVPASAPESLGVASLER
                     KSERSKVVRRSRAVFGVVAGVAVLGGVLTFVFGRPTHSTELAPSSPRATVAAGNERET
                     VPVVLGAATTVLETAPSERRAAELRVTAAPPMGSPPASVESSGRPLGRPLSPAHPVEP
                     ARKAAVAESSTARPRFDRHNPYTDDPP"
     gene            1648..2703
                     /locus_tag="VLJ38_07880"
     CDS             1648..2703
                     /locus_tag="VLJ38_07880"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HSU39470.1"
                     /translation="MQRLLGFFFTLALALGVATAAHADEPRKAAGEHYQRGLELADRG
                     DYKTALEEFERAYALSPNFAVLYNIGQADVELGRPAKAIDALERYLGEGKTKVPPARR
                     AEVERQLGQLRSSFAELGVTTTPPGARITVDGAEVGATPLAKPLMLTAGSHVVAASRP
                     GAETETRVVVVNEGQKTELSLELPDLPPPVVANALGAEQGAGTKGAETKPPAPLVATG
                     AAPGANDRAHASFPTGYVLIGSGVVLGGATVAHYFWNHGRVEEYRANEAALATDTSPG
                     RSERQAANNELATSIQHASVVTVVLGAASGALVAAGTVLVVLDQKARKKHASGGWELP
                     DVAVTRDSVRLSWGSTW"
     gene            2700..3680
                     /locus_tag="VLJ38_07885"
     CDS             2700..3680
                     /locus_tag="VLJ38_07885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39471.1"
                     /translation="MKTSFFGGGGWGRLLVAAWALGAAAGCYDVKTVELGVEALPDEV
                     GRVDVPEVGVRGQWFAYGDNSDYPQSCTNIGMHSAAMCSVVTVPPSLPTLNFPNWDGV
                     LCTKGSVGEAMPCTPDIPNCTTGVDYSNMWGAGIGLDFDLDVSSGQRHPLERGRWDAR
                     AHHVAGVAFDLMLFDDGGLGGPHLRVEFPIQLPESQRVPPGRTSFGLKKGDEPAVAGI
                     GDYSVKYPDDPIIPTEEHPQGSPYWGAGKRFGDARTDVSPVRVGHNVIHFSDTIRAPE
                     SDYVFDPTQLLGIQFHVSSFAPDMYTPIDRDTGAHFDYGFCISNFTFLRE"
BASE COUNT          608 a         1309 c         1366 g          650 t
ORIGIN      
        1 gtcgagttac cggcgctggt cgtggcgctg cgcgcttcgg gcggcaacgt cgcgcgtgcg
       61 tcgcagctcc tcggcatcac gcgtcagcgc gcgtatcgtt tgatggaggg acagggcgtc
      121 gatctggacg cactgcgcaa gccggaaggc ggcgacgcat gacggagccg aatcggctcg
      181 acgaggtcgt gggcggcaag taccgcatcg tgcgctttct cgcgtcgggc gggatgggct
      241 cggtgtacga ggcgcaccac accgtcgttc ggcgccgctt cgccgtgaaa ttcttgcatc
      301 acgagctcgc gctgcgccgc gagcttttgg cgcgttttca gcgggaggcg gaggccgcgg
      361 gtgcgctcga gagcgagcac gtcgctgcgg cgctcgattt cggcatcgcc gccgatggcg
      421 cgccgtacat cgtgctcgaa tacctggtgg gggaaagtct cgagcatttg ctggagcgtg
      481 agggccgctt gcccatcgag cgagccacca acgtcgtgca gcaagcgtgc cgcggggtcc
      541 aagccgcgca cgccgccggg atcgttcacc gcgatctcaa accgcataac ttgttcgtgt
      601 gccggcgtga ggacgcgacc gatctcgtca aagtgctgga cttcggcgtc gccaagctcg
      661 aggtcgtcga aaagagcgcc gccgccacgc gcacgggcac cgtgctcggc acgccttctt
      721 acatgtcgcc ggaacaagcg cgcggcgagc gcaacgtcgg tcacctctcg gacgtgtacg
      781 cgctcggcgc gatcctctac gagctcctct ccgggaagaa gccgcacccc ggggactcgc
      841 acaacgcgat tttgcaccac atcgcgacgc agcccgcgct ctctctcgcg ctcgcggagc
      901 cgagcttgcc gcacgcgctc gtcgcagtcg tcgagcgcgc gctcgcgggc gatccggcac
      961 gccgcccggc gtcggtcgag gagttcgcgc tcgagcttgc gccctgggca cgcgccgaga
     1021 tttggccccc gccggacctc gagccgtcgg cgccgcgtca cgccgagcca tcgacgacgt
     1081 tgccggcacc ggagccgctc cgaacgaccg tcgtgccggc ctccgcgccc gagagtctcg
     1141 gggtggcctc gctcgagcga aaaagtgagc gttccaaagt cgtgcggcgt tcacgggccg
     1201 tgttcggcgt cgtcgcgggc gtggcggtgc ttggcggcgt gctgacgttc gtgttcggac
     1261 ggccgacgca ctcgacggag ttggcaccgt cttccccgcg agcgaccgtt gcggccggga
     1321 acgagcgcga gacggtgccg gtcgtgctcg gcgcggcgac gacggtgctc gaaacggcgc
     1381 cgtccgagcg ccgggcggcc gaattgcgcg tgaccgctgc tccgccaatg ggctcgccgc
     1441 ccgcgtcggt cgagtccagc ggtcgtccgc tcggacgtcc gctgtcgccg gcgcacccag
     1501 tcgagccggc gcgcaaggcg gccgtcgcgg agtcttcgac ggctcggccc agattcgacc
     1561 gacataatcc gtacaccgac gatccgccct gaccttgctt cgggcacgct acctgcacaa
     1621 ggggcggcca ccacgactac tctccgcatg cagcgactcc tcggcttttt tttcacgctc
     1681 gcgctcgcgc tcggcgtggc cacggcggcg cacgccgacg aaccgcgcaa ggccgcaggc
     1741 gagcattacc agcgaggact cgagctcgcc gatcgcggtg actacaagac ggcgctcgaa
     1801 gagttcgaac gagcgtacgc gctgagcccg aacttcgccg tgctctacaa catcgggcag
     1861 gcggacgtgg agctcggccg tccggcaaag gccatcgacg ccctcgagcg ctacctcggc
     1921 gagggcaaga cgaaggtgcc gccggcgcgc cgcgccgaag tcgagcgcca gctgggccaa
     1981 ctccgctcgt cgtttgccga actcggcgtg acgaccaccc cgccaggcgc gcggatcacg
     2041 gtggacggcg ccgaggtggg cgcgacgccg ctcgcgaagc cgctaatgct gacggcgggc
     2101 agccacgtcg tcgcggcgag ccgaccggga gcggagaccg agacgcgcgt cgtggtggtg
     2161 aacgagggac agaagacgga gctgagcctc gagctgccgg atttgccgcc gcccgtcgtg
     2221 gcgaacgcgt tgggcgccga gcagggcgcg ggcaccaaag gtgcggagac gaagccgcct
     2281 gcgccgctcg tcgccacggg cgccgcaccg ggtgcgaacg accgcgcgca cgcgtcgttt
     2341 ccgacgggct acgtgctgat cgggtcgggc gtcgtgctcg gcggcgcgac ggtcgctcac
     2401 tacttctgga atcatggacg cgtcgaggaa taccgggcga acgaagccgc gcttgcgacg
     2461 gacacgtcgc cggggcgttc cgagcgacaa gctgcaaaca acgagcttgc cacctcgatc
     2521 cagcacgcga gcgtcgtgac ggtggtgctc ggtgccgcct cgggcgcgct cgtggcggcg
     2581 ggcacggtgc tcgtcgtgtt ggatcaaaag gcgcggaaga agcacgcctc cggcggttgg
     2641 gagttgccgg acgtcgccgt aacgcgtgat tcggttcggc tttcgtgggg aagtacgtgg
     2701 tgaagacgag tttttttggt ggtgggggtt gggggcggct cttggtcgca gcgtgggcgc
     2761 tcggggccgc ggcgggctgt tatgacgtga aaaccgtcga gctcggagtc gaagcgttac
     2821 cggacgaggt ggggcgcgtc gatgtgccgg aagtgggcgt tcgtgggcag tggttcgcct
     2881 acggcgacaa cagcgactat ccgcagtcct gcacgaatat cggcatgcac tcggctgcga
     2941 tgtgctccgt cgtcaccgtc ccgccctcgc tcccaacctt gaattttccg aactgggacg
     3001 gtgtgctgtg tacgaagggt agcgtgggcg aggcgatgcc gtgtacgccg gatatcccga
     3061 actgcaccac gggcgtggac tattcgaata tgtggggtgc gggcattggt ctcgacttcg
     3121 atctcgacgt ttcgagcggc cagcggcatc cgctcgaacg tggccgctgg gacgcgcgcg
     3181 cgcaccacgt cgctggcgtc gccttcgact tgatgttgtt cgacgacggt gggctcggcg
     3241 gcccgcattt gcgcgtcgag tttcccattc agttgccgga atcccagcgg gtgccacccg
     3301 gtagaacgag cttcggcttg aaaaagggcg acgagccagc ggtcgctgga atcggcgact
     3361 attcggtaaa atatcccgac gatccgatca tcccgaccga ggaacacccc caggggtcgc
     3421 cctactgggg ggcggggaag cgattcggcg acgcaagaac cgacgtgagc ccagtgcggg
     3481 tcggtcacaa cgtgattcac ttcagcgaca ccattcgagc ccccgagtcg gattacgtct
     3541 tcgatccgac ccaactgctc ggtattcagt ttcacgtgtc ttcgttcgct ccggatatgt
     3601 acacgccgat cgaccgcgac accggcgcac acttcgacta cggcttctgc atcagcaact
     3661 tcacgttcct gcgtgaatag tcgcgcggac gtccagcgag cgtccgcgcg aacgtccgcg
     3721 tgattcgcgc tctcgctcga accctccgag tctcgcattt tgacgcaccg aatcgcgcct
     3781 gcgcgcgccg gcacatcggt tgcactccgt gcgcgctcat gcatcgcaat cgaacgcccg
     3841 cgcggcgcac gtcgccgtgg cggctccgct tcatcgtcac gctcgttcaa atcctcctct
     3901 tcgcgacggt cgcgcacgcc gagccagacg ccg
//
LOCUS       DATIML010000455         8442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_91871, whole genome shotgun sequence.
ACCESSION   DATIML010000455 DATIML010000000
VERSION     DATIML010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8442
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91871"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VLJ38_07890"
     CDS             complement(<1..280)
                     /locus_tag="VLJ38_07890"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HSU39472.1"
                     /translation="MKKPNLFMIGAPKCGTTALARYLNEHPHVALAPQKETWFWSTDV
                     VHPAPPHLRIRSEDEYRALFAALKPGARTLVDASTSYLFSECAIDNVLR"
     gene            453..1922
                     /locus_tag="VLJ38_07895"
     CDS             453..1922
                     /locus_tag="VLJ38_07895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSU39473.1"
                     /translation="MSRRVAALHAACFAAAALGCQRRSPASLPSLPVASAPAPPPTRA
                     PTGAFLVAIETPRRTYLTFVRTAAIQSWDPRRDGWPALAVWERATEVRALRHLAFEPG
                     QKLEPAQIVELLPALKAAPTTLDITAPPYAARKSPWDASAVIQAALNDAGRRAGSEHP
                     VDVVVPGGTYDHRAVLHVPADVRLRGEGGVLRATNAKTSAVHLAGDRSAVLFLTLEAQ
                     ASERLAVPDSDGIWVGPRTVAEPVVHDTLVIGNSIIGPAGAHVFGMAEDGGLWAFNEA
                     RDGYADAFHHTGGSRYCQVVANRASGPGSRGDDLYAFIGYHGDGDPVHHCDCLANWGR
                     DGFGRGLAAVGAGYIDFEDNDIVGTKWAGVYIAQESSYDTYGSFSVTVRRNHIVAANR
                     GGTHDGLLAFAALPQTSAPSRSFGEVSNRVVDLTVSGNTFADTAKGDGGGSGIRVRNG
                     CARGQIEGNKIIGGSTPGIVVSGERFELSANVIEDAAVH"
     gene            1944..3287
                     /locus_tag="VLJ38_07900"
     CDS             1944..3287
                     /locus_tag="VLJ38_07900"
                     /inference="COORDINATES: protein motif:HMM:NF014051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSU39474.1"
                     /translation="MTTPLQEVNPSVVAAAPLADEPELESTPGAPQPSTTRSLVFVYV
                     GYTFRYLYLAVLVPFYGRVLRASEYGRLLAAMSLFQIIWIITEYGLPPVGARDVAAVT
                     SPAGRARVYGRYLAARGLLVPVGLLVGACATALSPVLRERPILGALATLNGIVVGFNL
                     SWYFQGTLRFKTSVTLEILAFAISLPLILTLVRTPDDTWLVLLSLLIANSTSTLIQHV
                     IAQRMLDRRAISARGGVSALRESTALFMHRGLTLAMGGSSTYLMSLFAGAAQVGWYGA
                     AERLINAGLAFLQPANQVLVGLIYRRIGSNSTEAAAYGLIRKALLLLLAFGFAVLIGI
                     QLVGSWAVPRILGPSFLPSVAVLKALSFVFPLAALSQVVNSYILIPLRLDRLVTTVSL
                     VSASTTVALILTLGPRFGYMGVAMATILGYLVNVCLLLEVMRRRRLFSKIFSREA"
     gene            complement(3312..4259)
                     /locus_tag="VLJ38_07905"
     CDS             complement(3312..4259)
                     /locus_tag="VLJ38_07905"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HSU39475.1"
                     /translation="MQREVLVPEATRVLSHVFHHVPSFRGRGRLLWSLNSLLLRRADV
                     SSPAVAQMRPGHRMLVDLRSKTEFHAYYTGEYDAENLRAVSALAEPDWVALDIGANIG
                     FHAVPLALTLRSLGGQGKLYCFEPVPSNRERLEQNLALNGAREACEIYGFGLSNAPGE
                     AQITLREDFEFGSTTGNAALVISDGLDAQFRTLTVVLRRLDDWVEEQALSRLDFIKID
                     VEGHEDLVFEGGLKTLARFRPVLLAEMNNSYFQRRKVELDARMTELLGPLGYEWIRHF
                     PLQRRWAKTDTLLKPQRAHDVFLVPRERSRALLSVLNSA"
     gene            complement(4273..5310)
                     /locus_tag="VLJ38_07910"
     CDS             complement(4273..5310)
                     /locus_tag="VLJ38_07910"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HSU39476.1"
                     /translation="MATTRLPSSVALPALASPRVSIVVNNYNYGRFVEQALESARAQT
                     YPCELIVVDDGSTDDSRARLARWADRVTVVHQENGGQYSAYNAGFAESSGELVVFLDA
                     DDWLYPDAIERAVAAFAEGVVKVHFRLELVDERGTRLGSKIPSTLAHGDVASRMLNRG
                     ILYASAPGSGNVYRRAVLERLFPLPKPDGDRVGADFFTIFGVALFGRVAALADPAGAY
                     RVHAPADRRAYVFGNAAQAHDERARVLGRMELFRHWVKERAGIVVPTLTDFSQLKTEF
                     VSTTVERAYFGRLRAGARAMPGLLRALWWHGEFSFLKKLGLSAWSLLITCAPGPVARP
                     VARYVTNPGSR"
     gene            complement(5312..6517)
                     /locus_tag="VLJ38_07915"
     CDS             complement(5312..6517)
                     /locus_tag="VLJ38_07915"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39477.1"
                     /translation="MRVALVHDWLTGKRGGEYVLEAIAELYPAAELFTLLHLPGAVDG
                     MLAQLPCHTSWLQRVPAADRYYRHFLPVMPRLIEAFDLSGYDLIVSSSHCVAKGIRRP
                     AGSAHVSYVHAPMRYIWDRYDDYFGPKRAALPVRVAAEAVRGTLQAWDRRVSASDRVD
                     LLIANSHFIAEQIERAYQRSAQVIHPFVDTTRFNRARRPTGSYLMVGAFAPNKRVDLA
                     IAAFNRLQLPLCIVGKGQEEERLRRMAGPTIEFLGALPNAEIEELYASSRAFVFPGIE
                     DFGITPLEAMASGLPVIAFGAAGVLETVVDGETGIFFRSQTVEALMEAVLRVERGEVE
                     FEESKLRARAAQFSKATFQARFLTAVDETLRRLGLRPHDTHAAPAERARHMASPASRT
                     IGVTADGAI"
     gene            6601..7725
                     /locus_tag="VLJ38_07920"
     CDS             6601..7725
                     /locus_tag="VLJ38_07920"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HSU39478.1"
                     /translation="MRTAVYINGRFLTQKVTGVQRYAREVLSALDEVVLASPPSFELE
                     VLAPPGTVAPPLRALRFRSAGPFRGNVWEQLTLPVLARGGLLWSFTPTGPLVTARQVV
                     TLHDAAVRAIPEAYTATFRVWYRLLFTVLVARVPHVLTVSNFSRDEIVRRFRCDSSKL
                     HVMLEGWQHIRRVAADESVLARHGLRPGRYVLAVSSLTPNKNFKLIAEAVRSLGDVDF
                     DVAIAGSLDDKIFGAGGAPAAAFVKYLGYVSDAELRALYENAGVFVYPSLYEGFGIPA
                     IEAMASGCPVIASNSASLPEVCGDGARYVSPRDADGLARAIDELMHDEVERRRLAERG
                     RDVARRYSWEAAARLNLAVMTHAVEQLLAGEAAARHDVRA"
     gene            complement(7707..>8442)
                     /locus_tag="VLJ38_07925"
     CDS             complement(7707..>8442)
                     /locus_tag="VLJ38_07925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39479.1"
                     /translation="VYMWSERLALIELAVPILVCVLLYRPLETPFARAFQRLISGFGP
                     FLGLGGVLALFAATEVVRSWQSYAATSNQGFGTFVVSRVTTYYFTALNNGSGMLQTSR
                     WPSYQGLWVFGWLYALPFGVGQSLLDAVGAREVPHELFLQRFGDPEFNNMSGIFPIYH
                     DLGLVLGLVYFLLQGFAFGLAYRSASKGEVFGGLLFPPFMVACMELLRISYLNGQRCF
                     LILVGALLLAVNFRVRPLSALQARTS"
BASE COUNT         1448 a         2751 c         2793 g         1450 t
ORIGIN      
        1 aacgtaaaac attatcgata gcgcattcgg aaaacagata agacgtcgac gcgtcgacca
       61 gcgtgcgcgc cccaggtttg agcgctgcga agagggcacg gtactcgtct tctgaccgga
      121 tccgcaggtg gggcggggca ggatggacca catcggtcga ccagaaccag gtttcctttt
      181 gtggcgctaa cgcaacatgc gggtgttcgt tcagataacg agccagggcg gtcgtgccgc
      241 acttgggtgc acctatcatg aagagattcg gtttcttcat cgcagacgcc aagagaaggg
      301 gtgaagtggg ggggaagcgt gcaacttatc tgcatatcat ttcacgcgcg ggatcttaag
      361 tgtttgtatc ggaaatcaga ggcaaaattg ccacgctcct ccgtcacggc tccgccctat
      421 ccctgccgca tgggctggag taaagaacgc cggtgagtcg ccgagtcgct gctctgcacg
      481 ccgcttgctt cgcggcagct gccctcggtt gccagcggcg ctcccccgcg tcgttaccgt
      541 ccttgcccgt cgcctccgcg cccgcgccgc cgccgacgcg ggcgccgacg ggggcctttc
      601 tcgtcgcgat tgagacgccc cgacgcacgt atttgacgtt cgttcgcact gcagccatcc
      661 aaagctggga tccgcgccga gacggctggc cggcgctagc cgtttgggag cgcgcgacgg
      721 aggtccgcgc tcttcgtcat ttggccttcg agccaggtca aaagctcgag cccgcgcaaa
      781 tcgtggagct gcttccggcg ctcaaagccg cccccacgac gctcgatatc accgcgccgc
      841 cgtacgctgc gcgaaaaagc ccgtgggatg cgagtgcagt cattcaagca gcgttgaacg
      901 acgccggtcg ccgcgcgggg tccgagcacc ccgtcgacgt cgtggtccca gggggaacgt
      961 acgatcatcg agccgtgctc cacgtgcccg ccgacgtgcg actccgaggg gaaggcggcg
     1021 tgctacgcgc gacgaatgcg aaaacttctg cggtgcacct cgccggtgac cgcagcgcgg
     1081 tgctctttct gacgctcgag gcccaagcgt ccgagcggct cgccgtgccc gacagcgacg
     1141 gaatttgggt ggggccccgc acggtggcgg agcccgtggt ccacgacacg ctggtcatcg
     1201 gcaattccat cattggcccc gccggcgccc acgtcttcgg catggccgag gatggtggcc
     1261 tctgggcgtt caacgaagct cgcgacggct atgccgacgc atttcaccac accgggggct
     1321 cacgctattg ccaggtcgtt gcgaaccgcg cgagcggccc cggcagccgc ggcgacgacc
     1381 tgtatgcgtt catcggctat cacggagacg gcgatcccgt gcatcactgc gactgcttgg
     1441 cgaactgggg ccgggacggc ttcggtcgcg gcctggccgc ggtgggtgcc ggttacatcg
     1501 atttcgagga caacgacatc gtgggcacca agtgggcagg ggtctacatc gcccaagaat
     1561 cttcgtacga cacgtacggc agcttttccg tcaccgtgcg ccgaaatcac atcgtggcgg
     1621 ccaatcgcgg cggcacacac gacgggctcc tcgcgttcgc ggctctaccg caaacgagcg
     1681 cgccgtcgcg gagtttcggc gaggtttcga atcgcgtcgt cgacctcacc gtgagcggca
     1741 acacgttcgc ggatactgca aaaggcgacg ggggaggcag cgggatccgc gtgcgcaacg
     1801 gttgcgcgcg cggtcagatc gagggcaata agatcatcgg cggcagcacg cccggcatcg
     1861 tcgtctcggg cgagcgtttc gagctttcgg caaacgtcat cgaggatgca gctgtccact
     1921 gaagcgcgga aatcgacgac cccatgacga cccccttgca agaagtcaat ccgagcgtag
     1981 tcgcggcggc tccgctcgcg gacgaaccgg agctcgagtc gacgcctgga gcgccgcagc
     2041 ccagcacgac tcgctccctc gtcttcgtct acgtcggcta cacgtttcga tatttgtacc
     2101 tggccgtgct cgttccgttt tacggccggg tgctacgcgc ttcggaatac ggccggctgc
     2161 tcgcggccat gtcgctgttc cagatcattt ggatcatcac ggagtacggc ctgccgcccg
     2221 tcggtgctcg ggacgtcgcg gccgtgacct cgccggccgg gcgtgcgcgc gtgtacggca
     2281 ggtacctcgc tgcgcgtggc ttgctcgtgc ccgtgggact gctcgtcgga gcctgcgcca
     2341 cggcgttgtc ccccgtgctc cgcgagcggc cgatcctggg cgcgttggcg acgctgaacg
     2401 gcatcgtcgt ggggttcaac ctgagttggt acttccaggg gacgttgcgc ttcaagacct
     2461 cggtcacgct cgaaatcctc gcatttgcca tcagcttgcc gctgatcctc acgctcgtgc
     2521 gcacgcccga cgacacctgg ctcgtgctgt tgtcactgtt gattgccaac tcgacctcga
     2581 ctctgatcca gcacgtcatc gcgcagcgga tgctggaccg ccgcgcgatc agcgcgcgcg
     2641 gtggggtcag cgcattgcgg gagtcgacgg cgctcttcat gcatcgtggg ctgaccctcg
     2701 cgatgggcgg ctcgtcgacg tacctgatga gcctctttgc cggggcagcg caggtcggtt
     2761 ggtacggcgc ggcggaacgc ctgatcaatg ccgggctcgc tttcctgcag ccggcgaacc
     2821 aagtgctggt tgggctcatc tatcgccgca tcggctcgaa cagcaccgaa gccgcggcat
     2881 acggcctgat ccgcaaagcg ttgctcctgc tgctcgcttt cggcttcgcc gtcttgatcg
     2941 ggatccagct cgtgggcagc tgggcggtgc cgcgcattct cggcccttcc ttcctgcctt
     3001 cggtggccgt gctcaaggcc ttgagcttcg ttttcccgct cgccgcgttg agccaggtcg
     3061 taaatagtta catcctgatc cctctgcgtc tcgacagact cgtcacgacg gtgagtctcg
     3121 tcagcgcgag cacgaccgtc gcgctgattc tgacgctcgg cccgcgcttc ggctacatgg
     3181 gcgtcgccat ggcgaccatc ctcggctacc tcgtcaacgt ctgtctgctg ctcgaggtca
     3241 tgcgtcgccg gcggctcttc tcgaagatct tctcgcgcga ggcgtgaggg cacgccgctc
     3301 ggcgtgcgcg ctcacgccga gttcaggaca gaaagcagcg cgcggctgcg ctcccggggg
     3361 acgagaaaaa cgtcgtgggc ccgctgcggc ttgagcagcg tgtcggtttt cgcccagcgt
     3421 ctctgcagcg gaaagtgccg aatccactcg tacccgagcg ggccgagcag ctccgtcatg
     3481 cgggcgtcga gctcgacctt cctgcgttgg aaatagctgt tgttcatctc ggccagcaac
     3541 accgggcgga agcgcgcgag cgtcttcaac ccgccctcga acacgagatc ctcgtggcct
     3601 tcgacgtcga ttttgatgaa gtcgagtcgc gacaatgcct gctcctccac ccagtcgtcg
     3661 agccgcctca acaccacggt cagcgtgcgg aattgcgcgt cgagcccgtc tgaaatgacc
     3721 aacgcggcgt taccggtcgt cgacccgaat tcgaagtctt cgcgtagcgt gatctgcgct
     3781 tcacccggcg cgttcgatag gccgaagccg tagatttcgc acgcctcgcg agctccgttg
     3841 agcgcgagat tttgttcgag ccgctcccgg ttcgagggca cgggctcgaa gcaatagagc
     3901 ttgccttggc ccccgagcga ccgcagcgtg agcgccaacg gaaccgcgtg gaatccgatg
     3961 ttcgcgccga tgtcgagcgc gacccaatcc ggctcggcga gggccgacac ggcgcgcaag
     4021 ttttcggcgt cgtactcccc cgtgtagtac gcgtggaact cggtcttgga ccgcaggtcc
     4081 accagcatgc gatgtccggg acgcatctgc gcaacagccg gcgagctcac gtcagcgcgc
     4141 cgcagcaaga gcgagttgag cgaccacaag agccgccccc gaccgcgaaa tgacggaacg
     4201 tgatgaaaaa cgtgactgag gactcgggtt gcttccggca ccaaaacttc tctttgcatg
     4261 gggtattact ctctagcggc tgcccgggtt cgtgacgtag cgagccaccg ggcgcgcgac
     4321 gggcccgggc gcgcaggtga tgagcaagct ccaggcgctg agcccgagct tcttgaggaa
     4381 cgagaattcg ccgtgccacc agagggcccg cagcaacccc ggcatggcgc gcgcgcctgc
     4441 gcggagccgc ccgaagtagg cgcgttccac ggtggtcgac acgaactcgg ttttgagctg
     4501 agagaagtcg gtgagcgtgg gcacgacgat gccagcgcgc tccttcaccc aatggcggaa
     4561 cagctccatg cgaccaagca ctcttgcccg ttcgtcatgc gcctgcgcag cgttgccgaa
     4621 gacgtacgcg cggcggtcgg cgggcgcgtg cacgcggtag gcgcccgccg gatccgcgag
     4681 cgccgcgacg cgcccgaaca gcgcaacgcc gaagatcgtg aaaaagtccg cgccgacgcg
     4741 gtcgccgtcg ggtttgggca gcggaaacag tcgttccaag accgcgcgcc ggtaaacgtt
     4801 cccagagccc ggggcggagg cgtagagaat gccccgattg agcatgcgcg aggccacgtc
     4861 gccgtgcgcg agagtgctcg gtattttcga gccgagccgg gttccgcgct cgtccacgag
     4921 ctccagacga aagtgtactt tcacgacacc ttcggcgaag gccgctacgg cgcgctcgat
     4981 cgcgtcgggg tagagccaat cgtcggcatc caagaagacg accaactcgc cggagctctc
     5041 ggcgaaaccc gcgttgtatg ccgagtattg gccgccgttt tcctggtgca cgaccgtgac
     5101 gcgatcggcc cagcgcgcga gccgcgcgcg ggagtcgtcc gtcgagccat cgtcgacgac
     5161 gatgagctcg caggggtagg tttgggcgcg cgccgactcg agcgcttgct cgacgaagcg
     5221 gccgtagttg tagttgttga ccacgatcga cacgcgcgga gaggcgagcg cgggcagcgc
     5281 tacggagctc ggcaggcgag tcgtcgccaa cttagattgc tccgtcggcc gtcacgccga
     5341 tggttcgcga cgctgggctc gccatgtggc gtgcccgctc ggcgggggcc gcgtgcgtgt
     5401 cgtgcggacg caggccgagt cgccggagcg tctcgtcgac ggccgtgagg aagcgcgctt
     5461 gaaacgtggc tttggaaaac tgcgcggcac gcgcccgcag cttcgattcc tcgaactcta
     5521 cttcgccgcg ctccacgcgc agcacggctt ccatcagtgc ctcgaccgtc tggctgcgga
     5581 agaagatacc cgtctctcca tcgacgaccg tctcgagcac tcccgccgcc ccgaacgcga
     5641 tgacgggcag gcccgaggcc atggcctcga gcggcgtgat gccgaagtct tcgatgcccg
     5701 ggaatacgaa ggcgcgcgag gaagcgtaga gctcttcgat ctcggcgttc ggcagcgctc
     5761 ccaagaattc gatggtgggg ccggccatgc ggcggagtcg ctcttcctcc tgccctttgc
     5821 cgacgatgca gagcggcagc tgcaagcggt tgaacgcggc gatcgccagg tcgacgcgct
     5881 tgttcggcgc aaaggctccg accatcaagt agctaccggt cgggcggcgg gcgcggttga
     5941 agcgcgtcgt gtcgacgaac ggatgaatca cctgggccga gcgctggtaa gcgcgctcga
     6001 tctgttcggc aatgaaatgg ctgttggcga tcaacaaatc gactcggtcg ctcgcgctca
     6061 cgcggcgatc ccaggcctgc aacgtaccgc gcacggcctc cgccgccacg cgcacgggca
     6121 gcgccgctcg cttcggaccg aaatagtcgt cgtagcgatc ccaaatgtaa cgcatgggcg
     6181 catggacgta gctcacgtgc gcgctgccgg cagggcgtct gatgcctttc gcgacgcagt
     6241 gggacgacga gacgatcagg tcgtacccgc tcaaatcgaa cgcttcgatc aggcgcggca
     6301 tcacgggtaa aaagtgccgg tagtaacgat ccgcggccgg cacgcgctgg agccagctcg
     6361 tgtgacacgg cagctgcgcc agcattccat ccaccgcgcc cggcaaatgg agcagcgtga
     6421 agagctcggc cgcgggatac aattcggcga tggcttcgag cacgtactct ccgcctcgct
     6481 tgccagtgag ccaatcatgc accagggcta cacgcatcgg tcgatcctcg gggaagagag
     6541 cgtagagcgc gcgttcgcca cgacgaggcg ctgtgagccg cgtgctatac gcgggtcgac
     6601 atgcgaactg ccgtgtacat caacgggaga tttctcaccc aaaaggtgac gggagtgcag
     6661 cgctacgcgc gtgaggtgtt gagcgcactg gacgaggtcg tgctggcgtc gccgccgagc
     6721 ttcgagctcg aggtgcttgc gcctcccggt accgtcgcgc cgccgctccg cgcgctgcgg
     6781 ttccggagcg cggggccgtt tcgcggcaac gtctgggagc agttgacctt gcccgtcctc
     6841 gcccgtggcg ggctgctctg gagcttcacg cccacgggac cgctcgtgac ggcgcgccaa
     6901 gtcgtcacgc tccacgatgc cgccgtgcgc gcgattcccg aggcgtacac cgcgaccttt
     6961 cgcgtgtggt accggctgct gttcaccgtg ctcgtcgcga gggtgcccca cgtgctcacc
     7021 gtctcgaact tctcgcggga cgagatcgtg cggcgctttc gctgcgacag cagcaaactc
     7081 cacgtcatgc tcgagggctg gcagcacatc cggcgcgtcg ccgccgacga gagcgtgctc
     7141 gctcgccatg gccttcgacc tggccgctac gtcctcgccg tgagcagctt gacgcccaac
     7201 aagaatttca aattgatcgc cgaagcggtg cgcagcttgg gcgacgttga tttcgacgtc
     7261 gccattgcgg gaagcctcga cgacaagatt ttcggcgccg gcggcgcgcc agccgccgca
     7321 ttcgtcaagt acctcgggta cgtgagcgac gcggagctgc gcgcgctgta cgagaacgcg
     7381 ggtgtcttcg tgtatccgtc gctgtacgag ggcttcggta tccccgcgat cgaagcgatg
     7441 gcctccggct gccccgtgat cgcttcgaac agcgcgtcct tgccggaagt ctgcggcgac
     7501 ggcgcgcgct acgtttcgcc gcgggacgcc gacggactcg ctcgcgcgat cgacgagctc
     7561 atgcacgacg aggtggagcg gcggcggctg gccgagcgcg ggcgggacgt tgctcgacgc
     7621 tatagctggg aggccgcggc gcgcctcaat ctcgccgtga tgacgcacgc cgtcgagcaa
     7681 ttgctggcgg gtgaagcagc tgcgcgtcat gacgtgcgcg cctgaagggc cgaaagcggg
     7741 cgcactcgga aattgacggc aaggagcagg gctcccacga ggatcagaaa gcagcgctgc
     7801 ccgttcaagt agctgatacg aagcagctcc atgcaggcga ccatgaaagg cggaaacaag
     7861 agaccgccga acacctcacc cttgctggcc gagcgatagg cgagtccgaa cgcgaacccc
     7921 tgcagcagga agtaaacgag gccgagcacg agcccgaggt cgtgataaat cgggaagatg
     7981 cccgacatgt tgttgaactc cggatcgcca aagcgctgga ggaacagctc gtgcggtact
     8041 tcccgcgcgc cgacggcgtc gagcaggctc tggcccacac cgaagggcag cgcgtagagc
     8101 cagccgaaaa cccagaggcc ctggtagctc ggccagcggc tggtctgcag catgccgctg
     8161 ccgttgttga gcgccgtaaa gtagtaggtc gtgacgcggc tcacgacgaa ggtgccaaat
     8221 ccctgattgc tcgtcgcagc gtacgattgc cacgagcgca ctacctcggt ggccgcgaag
     8281 agcgccagca cgcccccgag cccgaggaac ggtccgaagc ccgaaatcag gcgctggaag
     8341 gcgcgcgcga acggcgtctc gaggggacga tagagcagta cgcacaccag aatggggact
     8401 gcgagctcga tcaacgcgag gcgctccgac cacatgtaga cc
//
LOCUS       DATIML010000456         3634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3843309, whole genome shotgun sequence.
ACCESSION   DATIML010000456 DATIML010000000
VERSION     DATIML010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3843309"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VLJ38_07930"
     CDS             <1..230
                     /locus_tag="VLJ38_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HSU39480.1"
                     /translation="IWAIHVASQAKDRFGAALAIGVGANLFWHVVLNVGMAVGLLPVV
                     GVTLPLFSYGGSSVVTMMVGLGLLMNVSMRR"
     gene            complement(268..1281)
                     /locus_tag="VLJ38_07935"
     CDS             complement(268..1281)
                     /locus_tag="VLJ38_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HSU39481.1"
                     /translation="MNQPEAPTAPERPLTGDALIDETLAESFPASDPPSWTLGIDAEE
                     RANLEPAIELVIPARERDLGGFAVRRVLPWRTLRELGPFTFLDHMGPRTLSPGAGIDV
                     RPHPHIGLATLSYLFEGEIVHRDSLGSEQIIRPGDVNWMIAGRGVVHSERSTPESRQA
                     GARVHGVQIWAALAPEHEERAPSFEHHPQATIPRVTEPGVTLDVIAGSAFGARAPTSV
                     LSPTLCVHGRLEARATLRLDAEHDERGVYVLEGALVCEGSVVTAGQLAVIRRRALPHL
                     TALEATRLLLLGGQKLPGTRSLYWNFVASSEERLERAKRDWREERFPVIPSDPNERIP
                     LPE"
     gene            complement(1343..>3634)
                     /locus_tag="VLJ38_07940"
     CDS             complement(1343..>3634)
                     /locus_tag="VLJ38_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SNF2-related protein"
                     /protein_id="HSU39482.1"
                     /translation="AALRRLLRSPTIAEPASELVGMITYGLPKVAIEIGAQLPDLSQV
                     ADVVDMEPTIRMRAGGSLTEVEVELKAVYGDLEVEVRADGISPPVMILPPREGQKRAR
                     CIRCDIVAQQSAVEKLIELGLEPDESGQHFVAHGDSAIAFWSEGVGALPEEWDLYVPE
                     EFVGTQVRGKPIMMNARVSSGVDWLSVKVAYESEGVGVDREELERCLREGKKYVRLSD
                     NSFAPIDATRVQSMLDREIELITAAGKSGKIPLSQAGRVKELLEHVNGAQVTAGAKEL
                     FKKLESIDEIKPVKKPKSLKATLRPYQEQGLSWLRFIHDLGSGGVLADDMGLGKTIET
                     IALLLSLKAEKKDEALRALIVAPTSVVSNWVREIERFGPSLTTALWHGAGRKEQADEL
                     ESSNVIITSYALLRRDIDLLKELRLDYAILDEAQGIKNPMSATAQAAKQLNAEHRLAL
                     TGTPIENRLSEIWSIFDFVSPNMLGSLQKFEERYARPIEQGNSERAARLRAVIHPFIL
                     RRTKTEVAKDLPPKLEVDKLVDMVPDQKAIYLQVLREVRAQVMGEVERQGLAKSQLHI
                     LAGLTKLRQAACDPRLLGLPREFSHDDSGKLSALRELVEEVESGGHKVLIFSQFVSML
                     KLVAQALDEDKIRYEYLDGSTMDRQDRIDRFQADPTIPVFLISLKAGGSGLNLTAADT
                     VIHFDPWWNPAVEDQASDRAHRIGQKKVVTVYRLVAAGTIEEKILQLKQRKKDLVNSV
                     LSEDAGGEKMLTKEDLDDLFKVD"
BASE COUNT          560 a         1190 c         1211 g          673 t
ORIGIN      
        1 gcatttgggc catccacgtg gcgtcgcagg cgaaggatcg cttcggtgcc gcgctggcga
       61 tcggcgtcgg agcgaacctg ttttggcacg tcgtgctcaa cgtcggcatg gcggtcggcc
      121 tcctgcccgt cgtgggtgtg acgcttcctc tattttccta cggcggctcc agcgtcgtga
      181 cgatgatggt cggcctcggg ctcttgatga acgtcagcat gcgacgctga ccggagcccg
      241 cagcggccag ctcacgccgt catccgctta ctcgggcagc gggatgcgct cattcgggtc
      301 gctcggtatc acggggaagc gctcttcgcg ccaatcgcgt ttggcgcgtt cgagccgctc
      361 ctcagagctc gcgacgaaat tccagtacag cgaacgcgtg ccggggagct tttggccgcc
      421 gagcaggagc aggcgcgttg cttcgagcgc ggtcaaatgc ggcaaggctc tgcggcggat
      481 gacggcgagc tgcccggccg tcactaccga gccctcgcac acgagcgcgc cttcgagcac
      541 gtaaacgcca cgctcgtcgt gttcggcgtc gagacgtagc gtcgcgcgcg cttcgagccg
      601 gccgtggacg caaagcgtcg gcgaaagcac ggacgtgggc gcgcgggcgc cgaaggcgga
      661 gccggcgatc acgtcgagcg tgacgccggg ctccgtcacg cgcgggatcg tggcttgggg
      721 gtgatgctcg aagctcggcg cccgctcctc gtgttccggc gcgagcgcgg cccaaatctg
      781 gacgccgtgc acgcgcgccc ccgcttgccg gctctcgggc gtgctgcgct ccgaatgcac
      841 cacgccgcgc cccgcgatca tccaattgac gtcgcctggg cgaatgatct gctccgaacc
      901 caagctgtca cggtgcacga tctcgccctc gaacaagtac gaaagcgtgg cgagcccgat
      961 gtgcgggtgt gggcgcacgt cgatgccggc accgggcgag agcgtgcggg gccccatgtg
     1021 gtcgaggaag gtgaaggggc cgagctcgcg gagcgtccgc cacggcagca cgcgccggac
     1081 cgcgaaaccg ccgaggtcgc gttcgcgcgc ggggatcacg agctcgatcg caggctcgag
     1141 attcgcgcgc tcctcggcgt cgataccgag cgtccacgac ggcggatcac tcgccggaaa
     1201 agactcggcg agcgtctcgt cgatcagcgc gtcgcccgtg agaggacgct cgggtgcggt
     1261 cggcgcttcc ggctggttca tcgcggactc cgcgtggagt ctaccagctc tccgcccgag
     1321 cgccgggacg cgcggagccc tgtcagtcga ccttgaacag gtcgtccaag tcttctttgg
     1381 tgagcatttt ttcgcccccc gcgtcttcgc tcaggaccga gttcacgagg tccttcttcc
     1441 gctgcttgag ctgcaggatc ttctcttcga tcgtgccggc ggcgaccagg cgataaaccg
     1501 tgacgacttt cttctgcccg atgcggtgcg cccgatcgga ggcctgatcc tcgacggccg
     1561 gattccacca cgggtcgaag tgaatgaccg tgtcggccgc cgtcaaattc aggcccgacc
     1621 cgcccgcctt caagctgatc aaaaagaccg ggatggtggg atcggcctgg aagcggtcga
     1681 tacgatcctg gcggtccatc gtgctgccgt cgagatactc gtaccggatc ttgtcctcgt
     1741 cgagcgcctg cgcgacgagc ttcagcatcg agacgaattg gctgaagatg agcaccttgt
     1801 ggccgccgga ctcgacctct tccacgagct cgcgcagcgc cgacaacttg ccgctgtcgt
     1861 cgtgactgaa ctcgcgcggt aatccgagca ggcgcggatc gcaggctgcc tgacgcagct
     1921 tcgtgaggcc ggcgaggatg tggagctggc tcttcgccaa gccctggcgc tcgacttcgc
     1981 ccatgacctg cgctcgcact tcacgcaaga cctgcaggta aatggccttt tggtccggca
     2041 ccatgtcgac gagcttgtcc acttcgagct tcggcgggag atccttggcg acctcggtct
     2101 tggtgcggcg aagaatgaag gggtgaatca cggcgcgcag gcgcgcggcg cgctcggagt
     2161 taccctgctc gattggacgc gcgtagcgct cctcgaattt ttgcaggctc ccgagcatgt
     2221 tcggactcac gaaatcgaag atggaccaga tttcggatag gcgattttcg atcggcgtac
     2281 cggtgagggc gaggcggtgc tctgcgttga gctgcttggc cgcctgcgcc gtcgcgctca
     2341 tcgggttctt gatgccctgc gcctcgtcga gaatcgcgta gtcgaggcgg agctccttca
     2401 agaggtcgat atcgcggcgc aagagcgcat agctcgtgat gatgacgttc gagctctcga
     2461 gctcgtccgc ttgctccttg cgccccgcgc cgtgccagag cgcggtcgtg agcgaaggac
     2521 caaagcgctc gatttcgcgc acccagttcg agacgacgct cgtcggagcg acgatcagcg
     2581 ctcgcaaggc ctcgtccttc ttttcggcct tgagcgagag caagagcgcg atcgtctcga
     2641 tcgtcttgcc gagacccatg tcgtcggcga gcacgccgcc cgagccgaga tcgtgaatga
     2701 agcgcagcca agacaggcct tgttcctgat acgggcgcag cgtcgccttg aggcttttcg
     2761 gctttttgac gggcttgatc tcgtcgatgg actcgagctt cttgaacagc tccttggcgc
     2821 ccgccgtgac ttgcgcgccg ttcacgtgct cgagcagctc cttgacgcgg ccggcttgag
     2881 acagcgggat cttgccggat ttgccggcgg ccgtgatgag ctcgatttcg cggtcgagca
     2941 tgctctgtac gcgcgtcgcg tcgatcggcg cgaaggagtt gtccgagagc cgcacgtatt
     3001 ttttgccctc gcgcaggcag cgttcgagct cttcgcggtc gacgccgacg ccctcgctct
     3061 cgtaggcgac cttgacgctg agccagtcga cgccgctcga gacgcgcgcg ttcatcatga
     3121 tgggcttgcc gcgcacctgc gtgccgacga actcctccgg cacgtagaga tcccattctt
     3181 cgggcagcgc gccgacgccc tccgaccaga acgcgatcgc cgagtcgccg tgcgcgacga
     3241 aatgctggcc gctctcgtcc ggctcgaggc cgagttcgat cagcttctcg accgcgctct
     3301 gctgcgcgac gatgtcgcag cggatgcagc gcgcgcgctt ctgcccctcg cgcggcggca
     3361 ggatcatgac gggcggggaa atgccgtcgg cgcgcacctc cacttcgaga tcgccgtaaa
     3421 cggctttgag ctcgacctcg acttcggtga gcgagccgcc ggcacgcatg cggatcgtcg
     3481 gctccatgtc gaccacgtcc gccacttgcg acaaatccgg cagctgcgcg ccgatctcga
     3541 tggccacctt cggcagcccg tacgtgatca tgccgacgag ctcggaagcg ggctcggcga
     3601 tggtggggct cctgagtaag cggcgcagcg cggc
//
LOCUS       DATIML010000457         5327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_957984, whole genome shotgun sequence.
ACCESSION   DATIML010000457 DATIML010000000
VERSION     DATIML010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5327
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_957984"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..968
                     /locus_tag="VLJ38_07945"
     CDS             <1..968
                     /locus_tag="VLJ38_07945"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39483.1"
                     /translation="FGIAKVSTSEGKLTRAGAVFGTPHYMSPEQAAGNSVDHRGDIYS
                     VGVILYELVSGRVPFDADNFMGVLTQHMYKPPPPLREATPTPELLPDGLEAIVMKCLA
                     KRPEQRYQSMQEFVADIDKVIAGSRPAAARERSEDLTEPGSYYDDDLATSRARSRAPW
                     IALGLAAVLGLAALAVVLSRRGPAPAAAPHAIAVPGPVTTVEPRADAPHAAPGPALKQ
                     VIVATEPVAAEIFKGNESLGTSPVSVQVPEGQSVELVIRADGFKESRVMVDGQDASQS
                     IKLEHLASKAKPQKAPGATAAKPGATLKPKAPSIGGTDIRDPWGK"
     gene            992..2386
                     /locus_tag="VLJ38_07950"
     CDS             992..2386
                     /locus_tag="VLJ38_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSU39484.1"
                     /translation="MRDTARLRASIPEDVRQLCVRLAEGGHRAWAVGGCIRDELLAEL
                     RGAPTEHRNDWDIATSARPEAVMKLFRRVIPTGLKHGTVTVLFDDRAYEVTTLRGETT
                     YSDGRRPDSVFFVDDIKDDLARRDFTINAMAYDVLADRLIDPFGGLADLEQKRLRAVG
                     EPAARFAEDGLRVLRAARFVATLELELDPATERAIEPSLASYRKVSAERIRDEWLKTM
                     KARTPSRAFGVMQKHGILAISAPELVESVGCEQNRYHAYDVWGHALHCLDACPPVPVL
                     RVAGLLHDVGKPRSRAFSDKNQDYTFYDHDRIGAEMVDPLLSRLRFSTDEREHIVALV
                     RHHIICYDDQWSDAAVRRWLRRVTPELAEDLYVLCHADIVAKGREHAEDLKNLEGLKR
                     HVARVMSEGAAFGVKDLAIDGRALMQELGLPPSRRIGEVLRELLEDVIENPSLNERSK
                     LLARAKSILERPPG"
     gene            2459..3133
                     /locus_tag="VLJ38_07955"
     CDS             2459..3133
                     /locus_tag="VLJ38_07955"
                     /inference="COORDINATES: protein motif:HMM:NF027592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4920 domain-containing protein"
                     /protein_id="HSU39485.1"
                     /translation="MEPATPPSRTAPAFKILQLLAVTVTFGCHGADSHASAAGAPPVA
                     TAMSGATANGAKPDSALDCTAQHGSACTADERARAAATPPLTAAGSTQVGKYGSPLGA
                     APAESLASVLAEPTRYAGQPVRVEGHVRRACTAMGCWMELAASGAGDAPACRVIMKDH
                     AFFVPTNSAGSSARVEGTLAVRRIQPEQVAHMESEGAAFPHKAADGSADEVRLVASGV
                     ELWRGS"
     gene            complement(3168..3737)
                     /locus_tag="VLJ38_07960"
     CDS             complement(3168..3737)
                     /locus_tag="VLJ38_07960"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSU39486.1"
                     /translation="MQPVRRPATYDDLLALPDDVRAELVAGEVVLSPAPRPRHSKTQG
                     ALRSFLGAPFDDDDGHGGPGGWWIFIEVDIRLGTNIFRPDLAGWRRERLPDPDVRPID
                     VVPDWSCEILSESNAAYDRVTKRRLYADHGVRHFWLADPDSRTLETFALEAARWVDAG
                     SFDETARARIAPFEAVELDISRIFLPKRA"
     gene            complement(3838..>5327)
                     /gene="ftsH"
                     /locus_tag="VLJ38_07965"
     CDS             complement(3838..>5327)
                     /gene="ftsH"
                     /locus_tag="VLJ38_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HSU39487.1"
                     /translation="LLSDSSNKVTFDDVAGIDEAKDDCEEIIAFLKDPKKFQRLGGRI
                     PKGVLMMGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEIFVGVGASRVRDLFEQGKK
                     HAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVIIIAATNRP
                     DVLDPAILRPGRFDRRITVPRPDIRGREGILAVHTKKVPLVGDVDLGILAAGTPGFVG
                     ADLENLVNEAALLAARQDKDAVSMEDFELAKDKVLMGSERRSMVMSEAERRTAAWHEA
                     GHTIIGTLVPGNDAVHKVSIIPRGAALGVTMFLPTEDRHLMTRGQTLARIAMALGGRV
                     AEEVIFGEVTTGAQDDIKRATRLARAMVCELGMSKKMGPIAYGENDESVFLVREMTSR
                     REDYSENTAREIDDEVRAIVESQHQLAIKVVTDNREKLDRLATALLERETLDSEEIDA
                     ALEGRELPRRQRVIIPTWSEKRGKERAEKKRSPSLFGAPKPAPSS"
BASE COUNT          839 a         1814 c         1837 g          837 t
ORIGIN      
        1 atttcggcat tgccaaggtg tcgacctccg agggcaagct cacgcgcgcc ggcgcggtgt
       61 tcgggacgcc gcactacatg tcgcccgagc aagccgccgg caattcggtc gatcatcgcg
      121 gcgacattta ctcggtgggc gtgattctct acgagctcgt gagcggccgc gtgccgttcg
      181 acgccgacaa cttcatgggc gtgctcacgc agcacatgta caagccgccg ccgccgctgc
      241 gcgaagcgac gcccacgccc gagctcttgc cggacggcct cgaggcgatc gtgatgaagt
      301 gcctcgcgaa gcgccccgag cagcgctacc agtcgatgca ggagttcgtc gccgatatcg
      361 acaaggtcat cgcaggcagc cggcctgccg ccgcgcgcga gcgcagcgag gatctcaccg
      421 agcccggctc gtactacgac gacgacctcg cgacctcgcg agcgcggagc cgcgcgccct
      481 ggatcgcgct cggtttggct gcggtgctgg ggctcgccgc gctcgccgtc gtgctttcgc
      541 ggcgtgggcc ggcgccggct gcggcgccgc acgccattgc cgttcccggg cccgtgacca
      601 ccgtggaacc gcgcgccgat gcgccgcacg ccgctcccgg accggcgctc aagcaggtca
      661 tcgtcgcgac ggagccggtc gccgcggaaa tcttcaaggg caacgagagc ctcgggacga
      721 gtcccgtgag cgtgcaggtg cccgagggcc agagcgtcga gctcgtgatc cgggccgacg
      781 gcttcaaaga gagccgcgtc atggtggacg gccaggacgc cagccagagc atcaagctcg
      841 agcacctcgc gtcgaaggcc aagccgcaaa aggcgccggg cgcgacggcc gccaagccgg
      901 gcgctaccct gaagccgaag gctccgagca tcggcggcac cgacatccgc gacccctggg
      961 gcaagtgagc cgctggtatt aggcttcggg catgcgcgat accgcccgct tgcgcgcgag
     1021 cattcccgag gacgttcggc agctttgcgt ccggctggcg gaaggcggtc atcgggcttg
     1081 ggccgtgggc ggctgcattc gcgacgagct cctcgccgag ctgcgcggag ctccgaccga
     1141 gcacagaaac gactgggaca tcgcgacgag cgcgcgcccc gaagcggtga tgaagctctt
     1201 tcggcgggtg attcccaccg ggctcaagca cggcaccgtc accgtgctct tcgacgaccg
     1261 cgcgtacgag gtgaccacgc tgcgcggcga gacgacctac agcgacgggc ggcgtcccga
     1321 cagcgtgttc ttcgtcgacg acatcaaaga cgatctggcg cggcgggatt tcacgatcaa
     1381 cgccatggcc tacgacgtgc tcgccgatcg gttgattgat ccgttcggtg gcctggccga
     1441 tctcgagcag aagcgtttac gcgccgtggg cgaaccggcg gcgcgtttcg ccgaagacgg
     1501 gctgcgtgtg ctccgcgccg cccgcttcgt cgccacgctc gagctcgagc tcgacccggc
     1561 gaccgagcgc gccatcgagc cgtcgctcgc gagttaccgt aaagtgagcg ccgagcgcat
     1621 tcgcgacgaa tggctcaaga cgatgaaggc gcgcacgccg agccgcgcct tcggcgtgat
     1681 gcagaagcac ggcatcctcg cgatcagcgc gcccgagctg gtcgaatccg tcggctgcga
     1741 gcaaaatcgc tatcacgcgt acgacgtgtg gggacacgcg ctccactgcc tcgacgcctg
     1801 tccgcccgtg cccgtgctgc gcgtcgccgg cctccttcac gacgtgggta agccgcgctc
     1861 gcgcgcgttc agcgacaaga accaggacta caccttttac gaccacgacc gcatcggcgc
     1921 agaaatggtc gatccgctgc tctcgcgcct gcgtttttcg accgacgagc gcgagcacat
     1981 cgtcgcgctc gttcgccacc acatcatctg ttacgacgac cagtggtcgg acgcggccgt
     2041 gcgccgctgg ctccgccgcg tcacgcccga gctcgccgag gatctctacg tgctctgcca
     2101 cgccgacatc gtcgccaaag gccgcgagca cgccgaggat ctcaagaacc tcgagggcct
     2161 caaacggcat gtcgcccgcg tcatgtccga aggcgcggcg ttcggggtga aggacctcgc
     2221 catcgacggt cgtgcgttga tgcaagagct cgggctgccg ccgagccggc gcatcgggga
     2281 ggtcctgcgc gagctgctcg aagacgtgat cgaaaatccg tcgctcaacg agcgctcgaa
     2341 gctgctcgct cgcgcgaaga gcatcctcga gcgcccgcct ggctgacggt ggaggctcga
     2401 gccccggatt gggcgagcgc ggcgcggcgc ccgcgtgtaa aatgccgagg tggaacggat
     2461 ggagcccgcg acgccgcctt cacgcacagc gcccgccttc aaaatcctgc agcttctggc
     2521 agtcacggtg acgttcggct gccacggcgc cgactcgcac gcgagcgcgg caggcgcgcc
     2581 acctgtggcc acggccatgt ccggagcgac ggcgaacggc gcgaagcccg actccgcgct
     2641 ggactgcacc gcgcagcacg gctccgcgtg cacggctgac gaacgcgcac gtgcagctgc
     2701 gacgccgccg ctcaccgccg cgggctcgac gcaagtcggt aaatacggct cgccgctcgg
     2761 cgcagcgccg gccgaaagcc tcgcctccgt actcgccgaa cccacgcgct acgcgggcca
     2821 acccgtgcgc gtcgaaggcc acgtgcggcg cgcgtgcacg gccatgggct gctggatgga
     2881 acttgccgca agcggcgcgg gggacgctcc ggcgtgccgc gtgatcatga aggatcacgc
     2941 cttcttcgtt ccgaccaact ccgccggctc gagcgcacgc gtcgagggca cgctcgccgt
     3001 gcgccgcatc caacccgagc aggtcgcgca catggagagc gaaggcgcgg cgttcccgca
     3061 caaggccgcc gacggcagtg cggacgaggt gcgtttggtc gcgagcggcg tcgagctctg
     3121 gcgcggctcg tgacgccagc gcgcgaagcg aactgacgcg cgttacgtca cgcgcgcttc
     3181 ggcaagaaaa tgcgggagat gtcgagctcg acggcttcga acggagcgat gcgcgctcgc
     3241 gccgtttcgt cgaacgagcc cgcgtcgacc cagcgtgcag cttcgagcgc gaaggtctcg
     3301 agcgtgcgcg agtcggggtc ggcgagccag aagtgccgca cgccgtggtc ggcgtagagg
     3361 cggcgcttgg tgacgcggtc gtaggcagcg ttcgactcgg acaggatttc gcagctccag
     3421 tcgggcacta cgtcgatcgg acgcacgtcg gggtccggga gccgttcgcg gcgccaacca
     3481 gcgagatccg gacggaaaat gttcgtgccc agacgaatgt cgacttcgat gaagatccac
     3541 cagccgccgg ggccaccgtg gccgtcatcg tcgtcgaacg gggctccgag gaagctgcgc
     3601 agcgctcctt gggtcttcga atgtctcggt cgcggtgccg gcgagagcac gacttcaccc
     3661 gcgacgagct cggcgcgcac gtcgtccggc agggcgagca agtcgtcgta cgtcgcgggg
     3721 cgccgaacgg gctgcacgac cccgagtata gcgccgctcg agcgcgagcc gctgaaacga
     3781 cgaggcccgg ccgctcttcc gagcgccggg ccttgcgtct actggcgggt tcggtgttta
     3841 gctcgacggc gcgggcttcg gcgcgccgaa gaggctcggc gagcgcttct tttccgcgcg
     3901 ttctttgccg cgcttttccg accaggtcgg gatgatgacg cgctggcggc gcgggagctc
     3961 gcggccttcg agcgcggcgt cgatctcttc ggagtcgagc gtttcgcgtt cgagcagggc
     4021 tgtggcgagc cggtcgagct tctcgcggtt gtcggtgaca accttgatcg cgagctggtg
     4081 ctggctctcg acgatggcgc gcacctcgtc gtcgatctcg cgcgcggtgt tctcggagta
     4141 gtcctcgcgg cgtgaggtca tctcacgaac gaggaagacg ctctcgtcgt tttcgccgta
     4201 tgcgatcggg cccatcttct tgctcatgcc gagctcgcac accatggcgc gggcgaggcg
     4261 cgtggcgcgt ttgatgtcgt cctgcgcgcc ggtcgtcact tcaccgaaaa tcacctcttc
     4321 ggctacgcga ccgccgagcg ccatcgcgat gcgcgcgagc gtctgcccgc gcgtcatgag
     4381 gtggcgatcc tcggtcggca ggaacatggt gacgcccagg gcggcgccgc gcgggatgat
     4441 cgagaccttg tgcacggcgt cgttgccggg cacgagcgta ccgatgatgg tgtgacccgc
     4501 ttcgtgccag gccgccgtgc ggcgctcggc ttcgctcatc accatcgaac ggcgctcgct
     4561 gcccatcagg accttgtcct tggcgagctc gaagtcttcc atcgagactg cgtccttgtc
     4621 ctggcgggcg gcgaggagcg cggcttcgtt gacgaggttt tcgagatcgg cgcccacgaa
     4681 gcccggcgtg cccgcggcga ggatgccgag gtcgacgtcg ccgacgagcg gcaccttctt
     4741 cgtgtggacg gcgaggatgc cctcacgccc gcggatgtcc ggccgcggca cggtgatgcg
     4801 gcggtcgaaa cgaccgggac ggagaatggc gggatcgagc acgtcgggac ggttggtcgc
     4861 cgcgatgatg atgacgcctt cgttcgactc gaagccgtcc atctccacga gcagctggtt
     4921 cagcgtctgc tcgcgttcgt cgtgaccgcc gccgaggccg gcgccacgat ggcgaccgac
     4981 ggcgtcgatc tcgtcgatga agatgatgca gggcgcgtgc tttttgccct gctcgaacag
     5041 gtcgcgcacg cggctcgcgc cgacgccgac gaaaatctcg acgaagtccg agcccgagat
     5101 gctgaagaac ggcacgccgg cctcgcccgc gatcgcgcga gcgagcagcg tcttacccgt
     5161 accgggcgga cccatcatca aaacgccctt gggaatgcga ccgccgaggc gctggaactt
     5221 cttcggatcc ttgaggaacg cgatgatctc ttcgcaatcg tccttggctt cgtcgatgcc
     5281 ggcgacgtcg tcgaatgtaa ccttgttact cgagtcgctc agcaggc
//
LOCUS       DATIML010000458         2810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2979779, whole genome shotgun sequence.
ACCESSION   DATIML010000458 DATIML010000000
VERSION     DATIML010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2979779"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..1545)
                     /locus_tag="VLJ38_07970"
     CDS             complement(148..1545)
                     /locus_tag="VLJ38_07970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39488.1"
                     /translation="MLATSSQVLLVLVTGRARAEEPHVASAAPASTGATSETPDRFSV
                     SARSETYVQLYRRALVPGQNGTAVPTETAVPVTEYLYANARDVDAPWQKDAIGVEFAA
                     WGQLWPTNTSLERPFDGDVQTASVRLDAGPAWARLGRQQVAGGAARYARFDGVMAGGK
                     VGGLFVEGYGGFTVLPRWDARLGYHQLGAAEDTLLTAPLPAPERKNHFLAGARVGYTL
                     DRVSGSVSFHDEQAKGQVEHRNLGLDLGVQPFDALSSGASAILDLDSGRVAQGRVWAD
                     ATPHPLIDLGAEYLHSEPSLLLSRQSVLSVFSTNTYEEVGGTFGAKLQRWLRLEANGY
                     LEAYRDTGPGARGEVATRLRLDQAHATFVRIAYARVIAPQNGYQAMRISFSRRLLERL
                     FATLEGYGYFYDAPVAGYRTSSMYAGTASYRVLEPLDVLWSVSVARSPYAALDAQTML
                     RVTYRFDAPVRPRIR"
     gene            complement(1617..>2810)
                     /locus_tag="VLJ38_07975"
     CDS             complement(1617..>2810)
                     /locus_tag="VLJ38_07975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39489.1"
                     /translation="IATTHASAGKTVVQVCSTCHEHRHSPAKDALGTCTECHATHEPI
                     IPATALFDKGHTECTGCHKPHAFEAKEAVPCRSCHEDVNVIGGGRIGAHNGCTNCHSP
                     HNVKASAFGACATCHKDIHSDHPAQQGACISCHDPHPARVAATVDVRACTTCHKIAET
                     DHGAHRSTECTSCHKPHAFGLELASTTLCSKCHSERVHETASNRGHQTCTNCHSGLPH
                     HPEVDKVACTSCHHKEAGLVNAGHKQCIGCHEPHSGAQGTPCGSCHQAERQSAPSGHQ
                     ACTNCHEPHAGLPTLKACPDCHHSEEHSAHGQISTGCQTCHRPHGPKGVAAVPACTSC
                     HKTSELPGLHAESKHQPCTQCHGGHNDPASMARSVCVTCHKDRQNHFPESPRCVGCHL
                     FTRTP"
BASE COUNT          402 a          884 c         1027 g          497 t
ORIGIN      
        1 cgggggtgcc gcacgcaatg cccgtcaagt gcttttgatg ggggaagcgt ggcggcgccg
       61 attcgctgcg gcacgcgatg agcgcggcga gcgcgacggc gagccataac aagaacgtcg
      121 cggggaacga gcgggtgcgc gggccgttca tcggatcctc gggcgcaccg gcgcgtcgaa
      181 gcggtaagtc acgcgcagca tggtctgcgc gtcgagcgct gcgtaaggcg agcgcgccac
      241 cgaaacactc cagagcacgt cgagcggctc gagcacgcgg tacgacgccg tccccgcata
      301 catcgaggac gtgcggtaac ccgccacggg ggcatcgtag aagtagccgt agccctcgag
      361 cgtcgcgaac agccgctcga gcaggcggcg gctgaacgag atgcgcatcg cttggtaacc
      421 gttctggggc gcgatcacgc gcgcgtaggc gatgcgcacg aacgtcgcat gcgcttggtc
      481 gagccgcagg cgcgtggcga cttcaccgcg cgcgcccgga cccgtgtcgc gatacgcttc
      541 gaggtagccg ttcgcctcga gcctgagcca gcgctgtagc ttggcgccga acgtgccgcc
      601 cacttcttcg tacgtgttgg tcgaaaacac cgacaagacc gactggcgcg aaagtaagag
      661 cgacggctcc gaatgcaggt attcggcgcc gagatcgatg agcgggtgcg gcgttgcgtc
      721 ggcccagacg cggccctggg cgacgcggcc gctgtcgagg tcgagaatcg cgctcgctcc
      781 cgaggacagg gcgtcgaacg gctgaacacc caagtctaag ccgagattgc ggtgctcgac
      841 ttgacctttg gcttgctcat cgtgaaagga gacgctgccg ctcacgcgat cgagcgtgta
      901 accgacgcgc gcgcccgcga gaaagtgatt cttccgttcc ggcgctggca gcggagcggt
      961 gagcagcgtg tcctccgcgg cgccgagctg gtgatagccg agccgcgcgt cccagcgtgg
     1021 cagcaccgtg aaaccgccgt acccctcgac gaacaggccg cctaccttgc cgccggccat
     1081 cacgccatcg aagcgggcgt agcgtgcggc gccgcccgcg acctgctggc gtccgagccg
     1141 cgcccaagcg ggcccggcgt cgagcctgac gctcgcggtc tgcacgtcgc cgtcgaacgg
     1201 ccgctcgagc gacgtgttcg tcggccagag ctgcccccac gccgcgaatt cgacgccgat
     1261 cgcgtctttc tgccaaggcg cgtcgacgtc gcgcgcgttc gcgtacaagt actccgtgac
     1321 gggcacggcc gtctccgtcg gcaccgccgt gccgttttga ccgggcacga gcgctcggcg
     1381 atagagctgt acgtacgttt cgctccgcgc gctcacgctg aagcgatcgg gcgtctcgct
     1441 cgtcgcgccc gtgctcgccg gagcggcgct cgcgacgtgc ggctcttcgg ctcgggcacg
     1501 ccctgtcacg agcacgagca gcacctgcga cgacgtcgcg agcactcgcc gaagcccagc
     1561 cgtgcgccgc atgaccctgc gacgagcatg acacggcagc tcagctgcgg tgtagctcaa
     1621 ggtgtcctcg tgaagagatg acagccgacg caacgcgggc tctccggaaa gtgattttgc
     1681 cgatccttgt ggcaggtcac gcacacgctg cgcgccatcg acgcggggtc gttgtggccg
     1741 ccatggcatt gagtgcacgg ctggtgtttc gactcggcat ggaggcccgg tagctcgctc
     1801 gttttgtggc agctcgtgca ggcgggcaca gccgcgacgc ctttgggacc gtgcgggcga
     1861 tggcaggttt ggcagcccgt actgatttgg ccgtgcgcgc tgtgctcctc gctgtggtgg
     1921 cagtcggggc aggctttgag agtggggagg ccggcgtggg gttcgtggca gttggtgcac
     1981 gcttggtggc cgctaggcgc gctctggcgt tcggcttggt ggcagctccc gcagggcgtg
     2041 ccttgagcgc cggagtgggg ttcgtgacaa ccgatgcact gcttgtggcc cgcgttgacg
     2101 aggcccgctt ctttgtgatg gcagctcgtg caggcgactt tgtcgacttc gggatggtgg
     2161 gggaggccgc tgtggcagtt cgtacaggtt tggtggcccc gattcgaggc cgtttcatgg
     2221 acgcgttcgc tgtggcactt cgagcaaagc gtcgtgctcg cgagctcgag gccgaaggcg
     2281 tgcggcttgt ggcagctcgt gcactcggtg ctgcggtgag cgccgtgatc ggtctcggct
     2341 attttgtggc acgtcgtgca ggcgcggacg tcgaccgtgg cggcgacgcg cgcggggtgc
     2401 gggtcgtggc agctgatgca cgccccctgc tgtgcgggat gatcggagtg aatgtctttg
     2461 tggcacgtgg cgcaagcgcc gaacgcgctc gctttcacgt tgtgcggcga gtggcagttg
     2521 gtgcagccgt tgtgcgcgcc gatccgccca ccgccgatga cgtttacgtc ttcgtgacag
     2581 ctgcggcagg ggacggcctc cttcgcttcg aacgcgtgcg gcttgtggca gcccgtgcat
     2641 tcggtgtgcc ccttgtcgaa gagcgccgtc gccggaatga tgggctcgtg ggtcgcgtgg
     2701 cattccgtgc aggtgccgag cgcgtctttg gcgggtgagt ggcggtgctc gtggcacgtg
     2761 gagcagactt ggacgaccgt cttgcccgcg gacgcgtgcg tcgtcgcgat
//
LOCUS       DATIML010000459         2155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4133582, whole genome shotgun sequence.
ACCESSION   DATIML010000459 DATIML010000000
VERSION     DATIML010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4133582"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1048)
                     /locus_tag="VLJ38_07980"
     CDS             complement(<1..1048)
                     /locus_tag="VLJ38_07980"
                     /inference="COORDINATES: protein motif:HMM:NF020382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhR family protein"
                     /protein_id="HSU39490.1"
                     /translation="MTTTCVQIEFALRCSAQRYHAIAEEAALRVAEVPGLRAKWWWID
                     AQAGRAGGVYSFESRADAESYLTGPIVAALRDAPFCEGVQSRITDVLEQPTSRTDVTA
                     LRAMRESAAPSTESATPGEAAAPEAATERFAGRVVGDLSAAMTGVMVRLGHELGLYRA
                     LGEHGPLTSSELAGHASVFERYAREWLHQQRAAGYLDYDRESRTFRLAPGAFAVLVAE
                     DSPVFLPPAFDIVASMWADEGRLEQAFTSGQGIGWGEHDSRLFCGCARFFGTAYAAHL
                     ASSWLPALEGMTSKLAQGATVADVGCGHGVSTVLMARAFPASRFVGFDSHAASIEAAR
                     QRAKENHVSDRVRFE"
     gene            1133..>2155
                     /locus_tag="VLJ38_07985"
     CDS             1133..>2155
                     /locus_tag="VLJ38_07985"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39491.1"
                     /translation="MHESSPPAHDEARIADRLKQLRRRRFVGRERELGQLEQCTEPDG
                     PAVTFLHGIGGMGKSTLLEVFEAHLQARGVRSTHLDARSFEPTPRGFWTALGSELGLC
                     ADRSELGQAEAEALPLQVAAALASAPGSHVLIVDHYELLRLLDSWLRTDFVPQLPARV
                     RLILAGRHAPSAGWSTTAGWQTLVQSVLLQALDESDSRALLDSRRAPAPLVPGIVRFA
                     QGHPLALELALAAAAERSGFNFEASDRSRVVASLAQLFLQDLTDSGARAALEAACVVR
                     RASRSFLASLLGPDAATQAIERLGELGFVERTADGLSLHPSVRQALEGELRAIDPIRH
                     RALRRAA"
BASE COUNT          351 a          760 c          700 g          344 t
ORIGIN      
        1 gttcgaagcg cacgcggtcc gagacgtggt tctctttggc ccgctgccgg gccgcctcaa
       61 tcgaggccgc gtgactgtcg aagcccacga aacgagatgc cgggaaagct cgcgccatga
      121 gcaccgtgga gacgccgtgc ccgcaaccga cgtcagcgac cgtcgcgccc tgagcgagct
      181 tactcgtcat cccctcgagc gccggcaacc agctgctcgc gagatgcgcg gcataagccg
      241 ttccgaagaa gcgggcgcag ccgcaaaaca agcgcgaatc atgctcgccc cagccaatgc
      301 cttggccact cgtgaaggct tgctcgagcc gcccctcgtc cgcccacatg gaagcgacga
      361 tatcgaacgc aggcggtagg aagacggggc tgtcctctgc cacgaggacc gcgaaagcgc
      421 cgggcgccaa acggaaggtt ctgctctctc gatcgtagtc gaggtagccc gccgcccgct
      481 gctggtgcaa ccactcgcgc gcgtagcgct cgaacacgga agcgtgcccg gctagctcgc
      541 tggacgtcag cgggccgtgc tcgccgagag cgcgatagag gccgagctcg tggccgaggc
      601 gtaccatcac ccccgtcatc gccgccgaga gatcgcccac cactcgcccc gcgaagcgtt
      661 cggtagcggc ttcgggtgcg gcagcctcac ctggtgtcgc ggattcggtg ctcggagccg
      721 ccgattctcg catggcccgt agcgccgtga cgtcggttct gctcgtgggc tgctccaaga
      781 cgtcggtgat tcggctctgc acgccttcac agaacggcgc atcgcgcagg gcggcgacga
      841 tgggccccgt caagtagctc tcggcgtccg cacggctctc gaacgagtac acgcctccgg
      901 ctcgacccgc ctgagcgtca atccaccacc attttgctcg aagccccggg acctcggcga
      961 ctcgcagagc ggcttcctcc gcgatggcgt gataacgttg cgccgaacag cgcaacgcaa
     1021 attcgatctg aacacaagta gtcgtcatgt ttgctcctct cgtgacgtgc gcgtgaaacg
     1081 tgcgtccccg agggcagccc cgcatgaagg cagcatgaga agtcgatgaa caatgcatga
     1141 gagctctccg ccggcgcacg acgaggctcg catcgccgat cgcctgaagc agctacggcg
     1201 acggcgtttc gtggggagag agcgcgagct cggccaactc gagcagtgca ccgagcctga
     1261 cgggcccgcc gtcaccttcc tgcacggcat cggtggcatg ggcaaatcca cgttgctcga
     1321 ggtgttcgag gcccacttgc aggcacgcgg cgttcgctcg acccacctcg acgcacgcag
     1381 tttcgaaccg acaccgcgcg gattctggac ggctctcggg agcgagctcg ggctctgcgc
     1441 cgatcgaagc gagctcggtc aggcggaagc ggaagcgctg cccttgcaag tcgcggctgc
     1501 gctggcgagc gcacctggca gccacgtgct gatcgtcgat cattacgagc tcttgcggct
     1561 gctcgactcg tggctgcgca ccgatttcgt tccgcagctg cccgcacgcg tgcgtctgat
     1621 cctagcggga cgtcatgcgc ccagcgccgg atggagcacc acggccggct ggcaaactct
     1681 cgttcagagc gttctgttgc aagcgctcga cgagagcgac tcgcgcgcgt tgctcgacag
     1741 ccgccgcgcg cccgcacccc tcgtgcccgg aatcgtcaga ttcgctcaag gccacccgct
     1801 ggcgctcgag ctcgccctgg cggccgcggc cgagcgctcg ggcttcaatt tcgaggcgtc
     1861 cgaccgctcg cgcgtcgtcg cgagcctggc tcagctcttt ctgcaagacc tgacggactc
     1921 cggggcgcgg gccgcgctcg aggccgcctg cgtcgtgcgt cgcgccagcc gctcgtttct
     1981 cgcgtcgctc ctcggtccgg acgccgcaac gcaagcgatc gagcgtttgg gtgagctcgg
     2041 tttcgtcgag cgcaccgcgg acgggctcag cctacacccg agcgttcgcc aagcgctcga
     2101 gggggagctc cgagcgatcg accccatccg gcatcgagcg ctgcgccgcg cggcc
//
LOCUS       DATIML010000460         2453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5003262, whole genome shotgun sequence.
ACCESSION   DATIML010000460 DATIML010000000
VERSION     DATIML010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5003262"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VLJ38_07990"
     CDS             complement(<1..483)
                     /locus_tag="VLJ38_07990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39492.1"
                     /translation="MPDEAPQKPAPTGETAAASDTAVSDTRASEPPARDAPTEAAVAD
                     APEGTEATSAAPKRRKKRKKRAEAAEAAPAIPKEPALTPDGRERPLFVLGFPEDPELD
                     RLVHAFEAGNYAFVREQAPKLAERTSSRRVRDAARELARRIEPDPLIKVLLALSVALF
                     V"
     gene            complement(521..1936)
                     /locus_tag="VLJ38_07995"
     CDS             complement(521..1936)
                     /locus_tag="VLJ38_07995"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HSU39493.1"
                     /translation="MLFNTLAYAEFFAVVFVVSWSLARRRKLRLLFLLGASYFFYAKW
                     NWRFVPLIWGSSTVDWWLGNAIGRARDERRRKLWLALTASVNLGLLAVFKYFDFGVES
                     ARALLGALGFHPPDLALHVALPVGISFFTFESMSYVIDVYRGDIEPHQSYLEYLTFVA
                     FFPHLVAGPIVRPRDLLPQLSNPARFDPVAGSDALFLIALGLLKKVAIGDYLALNLVD
                     RTFDAPLHHSALECYVAAVGYAVQIYCDFSGYTDIAIGSAALLGVRFPKNFDAPYKAH
                     NLVDFWRRWHISLSTWLRDYVYISLGGNRAGRTHTYVNLMLTMLLGGLWHGANWTFVV
                     WGGLHGAGLAFTRFVRGDSKPNAASSLLSRVLGVVFTFHFVTAAWILFRADSFGSARE
                     FFARLATFTTYHPNLDPRVLGVLAVGLTSHYVPERWYERARTGFTALPAPAQGLALFA
                     AALGVREMASAEAVPFVYFQF"
     gene            2056..>2453
                     /locus_tag="VLJ38_08000"
     CDS             2056..>2453
                     /locus_tag="VLJ38_08000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSU39494.1"
                     /translation="MTAFGVPPVRLLLWLTSVAGLLAGALALLGRGPPVAFAVGGLLL
                     QALVSTIGVVIPALRVFGAVYAHGPAARAEVALTFDDGPNPETTPRVLALLAEHGARA
                     TFFVIGEKVLAHAGLVRAIANAGHVVGVHG"
BASE COUNT          419 a          769 c          881 g          384 t
ORIGIN      
        1 gacgaagagc gcgaccgaca gcgccaacaa gactttgatc agcggatcgg gctcgatgcg
       61 ccgcgccagc tcgcgcgccg cgtcgcgcac gcgccgagag ctcgtgcgct cggcgagctt
      121 cggtgcctgt tcgcgcacga acgcgtagtt gccggcttcg aacgcgtgca ccaggcggtc
      181 gagctccggg tcctccggga atccgagcac gaagagcgga cgttcgcggc cgtcgggcgt
      241 gagcgccggc tctttgggta tggcgggcgc tgcttccgct gcctccgccc gcttcttgcg
      301 ctttttgcgg cgcttcggcg cggccgacgt cgcttcagtg ccctcggggg catcggcgac
      361 tgcggcttcg gtcggcgcgt cgcgggcggg cggctcactc gcgcgcgtgt ccgaaacggc
      421 agtgtcggac gccgccgcgg tttcgccggt cggcgcgggc ttttggggag cttcgtccgg
      481 catcgtcagg gtgcccgaaa actagcaccc aggcagcgct tcagaactga aaataaacga
      541 aaggcacggc ttcggcgctc gccatttcgc gcacgccgag cgccgcggcg aagagcgcga
      601 gaccctgcgc gggtgccggt aacgcagtga agccggtgcg cgcgcgctcg taccagcgct
      661 cgggcacgta gtggctcgtg aggccgacgg ccaggacacc gagcacgcgt ggatcgaggt
      721 tcgggtggta cgtcgtgaat gtcgcgagac gggcgaagaa ttcgcgcgcg gagccgaagc
      781 tatccgcgcg aaacagaatc caagcggcag tgacgaagtg gaacgtgaac acgacgccga
      841 gcacgcgcga gagcaggctg ctcgccgcgt tcggcttgct gtcgccgcgc acgaagcgcg
      901 tgaaggcgag ccccgcgccg tgcagtccac cccagacgac gaaggtccag ttcgcgccgt
      961 gccacaggcc gccgagcagc atcgtgagca tcaggttcac gtacgtgtgc gtgcgtccgg
     1021 cgcgattacc gccgagcgag atgtacacgt agtcgcgcag ccacgtcgag agcgagatgt
     1081 gccagcgccg ccagaagtcc acgaggttgt gcgccttgta tggagcgtcg aaatttttcg
     1141 gaaagcgcac gccgaggagc gcggccgagc cgatggcgat gtccgtgtag ccggagaaat
     1201 cgcaatagat ctggacggcg tagcccacgg ccgcgacgta gcactcgagc gcggaatgat
     1261 gcagcggcgc gtcgaaggtg cggtcgacca ggttcagcgc gaggtagtcg ccgatcgcga
     1321 ctttcttcaa aagtccgagg gcgatcagga agagtgcgtc gctgccggcg acgggatcga
     1381 agcgcgccgg attcgaaagc tgcggcaaga gatcgcgcgg gcgcacgatg gggcccgcga
     1441 cgagatgcgg gaagaacgcg acgaacgtga ggtactcgag gtagctttgg tgcggctcga
     1501 tgtcgccgcg gtacacgtcg atgacgtagc tcatcgattc gaacgtgaag aagctgatgc
     1561 cgaccggcag cgcgacgtgc agggctaggt ccggcgggtg aaagccgagg gcgccgagca
     1621 gcgcacgcgc cgattcgacg ccgaaatcga agtatttgaa gacggcgagc agtccgaggt
     1681 tcacgctcgc ggtcagggcg agccagagct ttctccgccg ctcgtcgcgc gcgcgtccga
     1741 tggcgttgcc tagccaccag tcgaccgtcg atgagcccca gatcagcggc acgaagcgcc
     1801 agttccactt cgcgtagaag aagtagctcg cgccgagcaa gaacaagagc cggagctttc
     1861 tccggcgcgc gagcgaccac gacacgacga agacgaccgc gaagaactcc gcgtaagcga
     1921 gcgtattgaa gagcacggcg ctagaccctc gagttacgtg gtcttggcgg gaaagatcac
     1981 gatctttcga cacggttcaa gcacggtccc aaagttttgc gccggtgccg cagcggttcg
     2041 gctaaagatt gcgaggtgac cgcgttcggc gtgccgcccg ttcgcctgct gctctggctg
     2101 acgagtgtcg ccggcctgct cgccggtgcc ctggcgctgc tcggtcgagg cccgcccgtg
     2161 gcgttcgccg tgggggggct cctgctgcag gccttggttt cgacgattgg ggtcgtgatc
     2221 ccggctctgc gtgtgtttgg agccgtttac gcgcatggtc ctgccgcgcg cgccgaggtg
     2281 gcgctgacgt tcgacgacgg accgaacccg gagacgacgc cccgtgtgct cgcgctgctc
     2341 gccgagcatg gcgcgcgcgc gacgttcttc gtcatcggtg agaaggtgct cgcccacgcg
     2401 gggctcgtgc gcgccatcgc caacgccggc cacgtcgtgg gcgtgcacgg cca
//
LOCUS       DATIML010000461         3188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_382150, whole genome shotgun sequence.
ACCESSION   DATIML010000461 DATIML010000000
VERSION     DATIML010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3188
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382150"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VLJ38_08005"
     CDS             <1..226
                     /locus_tag="VLJ38_08005"
                     /inference="COORDINATES: protein motif:HMM:NF039417.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6364 family protein"
                     /protein_id="HSU39495.1"
                     /translation="ITLSIDEKTAEAARKVAREQGTSLNELVRRFIASLAGQRAPSEI
                     AAELVALFTEQPGNSRGERIAREDAYADRL"
     gene            223..636
                     /locus_tag="VLJ38_08010"
     CDS             223..636
                     /locus_tag="VLJ38_08010"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HSU39496.1"
                     /translation="MTERTFIDTNVLVYADDASAGAKRERALAVLAALVGASQAVVST
                     QVLQEYFVVATRKLGVPPEVARRKVEVLSRLDVVIVRPELVIAAIDLHRLHSISFWDA
                     LIVRAAAAASCARVLSEDLQHDQVIDGVRITNPFR"
     gene            complement(688..2124)
                     /locus_tag="VLJ38_08015"
     CDS             complement(688..2124)
                     /locus_tag="VLJ38_08015"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39497.1"
                     /translation="MSQSRITETQTSGKVPAERSAFGHIGILNDYVRVPYANGSSFAS
                     QLLYREFSARGQRVTVIGPHDPEATQADLPRHHLFLPSLPLRIHPGVHLPLPSREALA
                     EVARQNFDVVLAQTGSGLTQLGVWLRRTRGVPFLCVNTIHMPSVYDVLLPDRLHHNLR
                     FTEFCRERVIPWVEAQLVRTYNDSDGLIVLSEGLAQYWRDRGVGVPIHVIPRVVDPKI
                     FDVNEPADPFPAGAARGHRLLCVCRHTREKSVNRLLEIFAELIAPAVPDATLTLVGDG
                     PDHDAFRARALELGIADRTYFPGEQSLTEVARWYQHADLFVYASLSETYGQVIGEALW
                     SGLPVVAFEDGMGVSQQVENGKNGILVPPGPDERASNWRFAAEVATLLREPLRRQTLG
                     QAARRRAHDRSSMNETIERYYAAFEAGREHCLRTLHGSRSRAYLPLARWAAIHVATAA
                     LGTLRPPAVVNRNHRRQPGWDGIELVEA"
     gene            2123..>3188
                     /locus_tag="VLJ38_08020"
     CDS             2123..>3188
                     /locus_tag="VLJ38_08020"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU39498.1"
                     /translation="MRVLDLAEFYSERGGGVRSYLDRMLQHTGALGHELVVVAPGPRD
                     EETRVGEGGRIVRYRAPRMPYDPSYNAPIAVSRMRALVREYAPDVLQISSPFVPLWVG
                     ATLKVPLRTYVHHSDPIGCYLAPLAAKSAAGRVLEAAAWRYLAAVSARCDATIVSGAW
                     LEHELSRHGCARVHTVEFGIDHSQFSPARRDEALRSELLGPLAADPDARLVLVAGRLA
                     ADKRQRLVLEALELLAQKRPLGLVLLGDGPERERLEAQGRKLPRFHSLRFTRDREEYS
                     RLLASVDALGHGSLCETFGFLLAECLASGTPLVTPDRGGAADLANGAFAERYPAFGGP
                     EAVARALGRLFERPRAELTPL"
BASE COUNT          493 a         1111 c         1092 g          492 t
ORIGIN      
        1 tatcacgctc tccatcgatg agaaaacggc ggaggcagca cgcaaggtcg cgcgcgagca
       61 gggaaccagc ttgaacgagc tcgtgcggcg gttcatcgcc agcctcgcgg gacagcgtgc
      121 accgagcgag atcgcggcgg agctcgtcgc gctcttcacc gagcagccgg gtaactcacg
      181 aggcgagcgc atcgcgcgtg aagacgcgta cgccgatcgc ctgtgaccga gcgcaccttc
      241 atcgacacca acgtcctcgt ttacgccgac gacgcgagcg ccggcgcaaa gcgagaacgc
      301 gcactcgcag tgctcgcggc gctcgtcgga gcgtctcaag ccgtcgtctc gacgcaagtc
      361 cttcaggaat acttcgtcgt cgcgacccgc aagctcggcg taccgccgga agtcgcgcgt
      421 cgcaaggtgg aggtgctctc acggctggac gtcgtcatcg tgcgtcccga actcgtcatc
      481 gccgcgatcg acctgcatcg gctgcattcg atttcatttt gggacgccct gatcgtacgc
      541 gcggccgccg cggccagctg cgctcgcgtg ctcagcgaag atctgcagca cgaccaggtg
      601 atcgacgggg tgcgcatcac gaaccccttt cgctagcgcg ggcgctggct cttccgaacg
      661 cgccggctcg acgttacgcg gtgagtgtca agcctcgacg agctcgatgc cgtcccagcc
      721 gggctggcgc cggtgattgc ggttgacgac ggcggggggc cgcagcgtgc cgagcgccgc
      781 cgtggcgacg tgaatcgccg cccagcgcgc gagcggcaaa tacgcgcgcg agcgcgaacc
      841 gtgcaacgtg cgtagacagt gttcgcggcc ggcctcgaac gcggcgtagt agcgctcgat
      901 cgtctcgttc atgctcgagc gatcgtgcgc gcgacggcgc gcggcttggc cgagcgtctg
      961 gcggcgcagc ggctcgcgca gcagcgtcgc gacctcggcc gcgaagcgcc agttggacgc
     1021 gcgttcgtcg gggccaggcg ggacgaggat gccgttcttg ccgttttcga cctgttgcga
     1081 gacgcccatg ccgtcctcga acgcgacgac gggcaggccc gaccagagcg cctcgccgat
     1141 cacctggccg tacgtctccg agagcgaggc gtacacgaag aggtcggcgt gctggtacca
     1201 gcgcgcgacc tcggtgagcg actgctcgcc tggaaaatac gtgcgatcgg cgataccgag
     1261 ctcgagcgcg cgcgcgcgga aagcgtcgtg atcgggcccg tcaccgacga gcgtgagcgt
     1321 cgcgtccggc acggccggcg cgatgagctc ggcgaagatc tcgagcagcc ggttcaccga
     1381 cttttcgcgc gtgtggcggc aaacgcagag caagcggtga ccgcgcgcgg cgcccgcggg
     1441 gaacggatcg gcgggctcgt tcacgtcgaa gatcttcggg tctacgacgc gcggaatgac
     1501 gtggattggc acgccgacgc cgcgatcgcg ccagtactgc gcgagacctt cggacagcac
     1561 gatgagcccg tcgctgtcgt tgtaggtgcg cacgagttgc gcctcgaccc acgggatcac
     1621 gcgctcccga caaaactcgg tgaagcgcag gttgtggtgc aagcggtccg gcagcagcac
     1681 gtcgtacacg ctcggcatgt ggatcgtgtt gacgcacaga aacggcacgc cgcgcgtgcg
     1741 ccggagccag acgccgagct gcgtgagccc ggagcccgtc tgcgcgagga ccacgtcgaa
     1801 attctgccgt gcgacctccg cgagcgcctc gcgcgagggc aacggcaagt gcacgcccgg
     1861 gtggatgcgc agcggcaggc tcggcaaaaa caggtgatgc cgcggcaggt ccgcttgggt
     1921 tgcctccgga tcgtggggcc cgatcacggt cactcgctga ccacgcgccg agaactcccg
     1981 atagagcagc tgcgaggcga aggacgatcc attcgcgtag ggcacgcgca cgtagtcgtt
     2041 caagatgccg atgtggccga acgcgctccg ctccgcgggc accttaccgg acgtttgagt
     2101 ttctgttatt cgcgattgcg acatgcgcgt cctcgatcta gccgagttct actcggagcg
     2161 cggtggtggc gtgcgctcct acttggatcg aatgctccag cacaccggag cgctcggtca
     2221 cgagctcgtg gtggtggcgc cggggccgcg cgacgaagag acgcgcgtgg gtgaaggcgg
     2281 gcgcatcgtg cgttaccgcg cgccccgtat gccgtacgat ccgagctaca acgctccgat
     2341 cgccgtctcg cgcatgcgcg cgctcgtacg cgaatatgcg ccggatgtct tgcagatttc
     2401 gagtccgttc gtgccgctct gggtcggcgc gacgctcaag gtgccgctcc gcacctacgt
     2461 gcaccactcc gatccgatcg gctgctacct cgcgccgctc gccgccaaat ccgcggcggg
     2521 ccgcgtgctc gaagccgcgg cttggcgcta cctcgcggcc gtgagcgccc gctgcgacgc
     2581 caccatcgtc tcgggtgcct ggctcgagca cgaactgtcg cgtcacggct gcgcgcgcgt
     2641 gcacacggtc gagttcggca tcgatcactc gcagttctcg cccgcgcgcc gcgacgaagc
     2701 gctccgcagc gagctgctcg gtcccctcgc cgccgacccc gacgcgcggc tcgtgctcgt
     2761 cgccggacgg ctcgccgccg acaagcgcca acggctcgtc ctcgaagcgc tcgagctgct
     2821 cgcccaaaag cgcccgctcg gcctggtact gctcggtgac ggccccgaac gcgagcgcct
     2881 cgaagcgcaa ggccgcaagc tgccgcgctt ccactcgctc agattcacgc gcgatcgcga
     2941 ggagtactcg cgcctgctcg cgagcgtcga cgcgctcggt cacggctcgc tgtgcgagac
     3001 gttcggcttc ctgctcgccg agtgcctcgc gtccggcacg ccgctcgtca cgcccgatcg
     3061 cggcggcgcc gccgacctcg cgaacggagc gttcgccgag cgctacccag cgttcggtgg
     3121 ccccgaagcc gtcgctcgcg cgctcggccg gctgttcgaa aggccgcgcg ccgagctcac
     3181 gcccctcg
//
LOCUS       DATIML010000462         7176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_673071, whole genome shotgun sequence.
ACCESSION   DATIML010000462 DATIML010000000
VERSION     DATIML010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7176
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673071"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..548
                     /locus_tag="VLJ38_08025"
     CDS             <1..548
                     /locus_tag="VLJ38_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation transporting ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HSU39499.1"
                     /translation="LPFLPMLPTQLLLNNFLYDLSQITIPTDNVDAAYLDEPQHWDVK
                     LIRRFMLVLGPISSIYDFLTFFLLLKVFHLSEAAFRTGWFVESLATQTLVLFVIRTAG
                     RPWKSRPSRALTLTTLTIAATAVAVPYLPIARTFGFEPLPSVLLPVLLGIVVTYLGLV
                     EVVKRRLLWPSIEQRASASRA"
     gene            718..3105
                     /gene="ppsA"
                     /locus_tag="VLJ38_08030"
     CDS             718..3105
                     /gene="ppsA"
                     /locus_tag="VLJ38_08030"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: protein motif:HMM:NF005057.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HSU39500.1"
                     /translation="MSYVIPFRELDMQRVAEVGGKNASLGELIASLEPKGIRVPDGFA
                     ITAAAFRLHLKRAGLEERLYAELDALDVSDLAALARVGAELRERVRSAALPPEVAARV
                     LEAYRQLSKRYEQDGTDVAVRSSATAEDLPTASFAGQQETYLNVRGEERLLQAVRDCM
                     ASLFTDRAIVYRAERGFAHRGVALSVGIQKMVRSDLGSAGVIFTLDTESGFRDVVVLT
                     GAFGLGETVVQGKVDPDEFWVHKPALGNGYPAIIRRELGEKAIRLVYGSGGNQALVEE
                     RVPLEQRRQPILPDEDILTLARWAVRIEEHYSKRAGRPTPMDIEWAKDGRSGQLYIVQ
                     ARPETVHAQSGPPKFEMFRLRGKGKLLVQGKSVGAKVGRGRVRVVHSPQELATFQPGE
                     VLVAPMTDPDWEPVLKHAAAVVTDHGGRTCHAAIVSRELGIPCVVGTGNATTALVTGD
                     EVTVSCAEGDEGKIYAGRVEFDRAEIDPAKLPEPRVPVMLNVGNPENAFLLGQLPSAG
                     VGLLRIEFVVSSAIGIHPMALVHPERVTSPEALAQLRKRTAGFSSPSDFFVEGLAHGV
                     AQVAAAFYPRPVIVRFSDFKTNEYAGLVGGADFEPHEDNPMIGFRGASRYYDERYREG
                     FALECQAIRQVREELGLTNVKVMIPFCRTLEEGRRVLAELAQNGLKRGDHELEVYVMC
                     EIPNNVILAEEFAELFDGFSIGSNDLTQLTLGIDRDSEILASLFSERDPGVMRSIALV
                     IERAHRKHRKVGLCGQAPSDHPDFATFLADQGIDSISVTPDALPLVLELLAVKPG"
     gene            complement(3154..3660)
                     /locus_tag="VLJ38_08035"
     CDS             complement(3154..3660)
                     /locus_tag="VLJ38_08035"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSU39501.1"
                     /translation="MIKPRKDEIRQELRRQHASVADALQDLLRLAADADPRALQLAWS
                     GFEHELFRHFEFEEESLFPLTEEAFPEDVRAMRSEHDRIRDVVCELGLLCDLHAVRKR
                     AVERLVNMLRAHAEHEDATLYRWVDEQAPAETRRHLLRLFMNTVRSEFKAGAEPKAAG
                     GRRAAPAG"
     gene            complement(3804..4619)
                     /locus_tag="VLJ38_08040"
     CDS             complement(3804..4619)
                     /locus_tag="VLJ38_08040"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39502.1"
                     /translation="MTSSSGAPPPSTSELVARARAGNRDALEELLASVAPSIHRFGLR
                     MCKNAHDADDILQDTLLNIAGHLQDFEGRSSLSSWVFALTRSACARRRRGLKNRPPED
                     AEALGTKPDPEPGPEQRAGDQELALALSKALDALPDAHREVVLLRDVEGLSAPEAAAA
                     LGVSVDAVKSRLHRARESLRDALRPLLEPTRAGAAGGCPDVVTLWSRKLEGELDQADC
                     EAMTEHLRGCPACSVACDALKQALLACHRIGNEEVPPEVQARVKAAVRTWTAR"
     gene            complement(4695..5150)
                     /locus_tag="VLJ38_08045"
     CDS             complement(4695..5150)
                     /locus_tag="VLJ38_08045"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HSU39503.1"
                     /translation="MQNHICSRRIALKVLAAGGAAGTLGSACSGPAGASPDAVGVVQA
                     GLVSSYPVGSLEPVGNLALAVGRDEKGLYAMTLTCTHAGCNMAVDGNVSPGGIVCSCH
                     GSQFDANGTVTRGPAQEALTHFAVTVDASGTITVHGDQTVAATARTKVS"
     gene            5443..5907
                     /locus_tag="VLJ38_08050"
     CDS             5443..5907
                     /locus_tag="VLJ38_08050"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSU39504.1"
                     /translation="MKIQSILVPVDYSECSAAAVTLAIEVASKFGAELDVVHVWDRPT
                     YVSEDIQVGHGDGAHSLIELIRANAEREMAQFIAELSVPPRLKCSTRLLSGNPAATIL
                     KVLQDGKHQLLVMGTHGRTGLRHVLLGSVAEKLVRLSPVPVLTVPPDRESQP"
     gene            5913..7166
                     /locus_tag="VLJ38_08055"
     CDS             5913..7166
                     /locus_tag="VLJ38_08055"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU39505.1"
                     /translation="MAGTLVPGIDPLVSGVKRDARTHPSLRRFGKYAVVALLVAGAGI
                     AAIRIQRAPRAPAFQFESAKVDRGDIHAKVTANGALSALVTVNVGSQVSGRVQTLLVD
                     FGSSVERGQVVASIDPSLFLAAKAQATANHQAAVASVARAQAQVQNAEKQFARSGSLQ
                     REGLTTSAELETAEANLAVARADLNVARANVNQTAATSAQAELNLKYTTIVSPIDGVV
                     ISRNVDVGQTVAATLQAPTLFTIAQDLTRMQVDTNVAEADVGKIRKGMEATFTVDAYP
                     KRVFRGRLRQVRDNAQTLQNVVTYDAVVDVDNSERLLKPGMTANVSFTYADRQGVPRI
                     RNAALRFRPEPAALTEFMQGRPVPKPTPPDGRLVWRLAGGKAEPVAVEAGVSDGMFTE
                     LVSGPLKPGDALVEEMQADGAKRSP"
BASE COUNT         1160 a         2420 c         2396 g         1200 t
ORIGIN      
        1 ttttgccgtt tttacccatg ttgccgacgc agctcttgct caataacttc ctgtacgatc
       61 tgtcgcaaat cacgattccg accgacaacg tggacgctgc gtatctcgac gagccgcagc
      121 actgggacgt aaagctcatt cgccgcttca tgctcgtgct cgggcccatc agctcgattt
      181 acgattttct gacgtttttt ctgctgctga aggtgtttca cttgagcgag gccgcgtttc
      241 gcaccggttg gttcgtcgag tcgctcgcga cgcaaacgct cgtgctgttc gtgattcgga
      301 ccgccgggcg accctggaag agccgcccga gccgcgccct cacgctgacg acgctcacga
      361 tcgcggccac tgccgtcgca gtgccgtacc tgcctatcgc gcgaaccttc gggttcgagc
      421 cgctgccgag cgtgctcttg ccggttctgc tcggcatcgt cgtcacgtac ttggggctgg
      481 tcgaagtcgt gaagcgtcgg ctgctctggc cgagtatcga gcaacgcgcg agcgcttcgc
      541 gcgcatgaac tgcgcagcgc cgcgctcgtg ccgcagcact tgcgctcgcg gccgttggaa
      601 cacgcgcgct cgctcgcatg aaggcgccga ttatcgacgt ccttgccgcg actctgatgc
      661 tcgcgtccgt gcgcgagact tggcacatgc cgtgcacccc gacagcacag aaacgccatg
      721 tcctacgtca ttccgttccg tgagctcgat atgcagcggg tggccgaagt cggcggcaag
      781 aacgcgtcgc tcggcgagct cattgcgagc ctggaaccca agggaattcg cgtccccgac
      841 ggcttcgcca tcaccgccgc ggcgtttcgc ctgcacctca aacgcgccgg gctcgaagag
      901 cgcctctatg ccgagctcga cgcgctcgac gtgagcgatc tcgccgcgct cgcacgcgtc
      961 ggcgccgagc tccgcgagcg ggtgcgttcg gctgcgttgc cgcccgaggt cgcggctcgc
     1021 gtcctcgagg cgtatcgcca gctgtcgaag cgctacgaac aagacggcac cgacgtcgcc
     1081 gtgcgctcga gcgcgacggc ggaagacctg ccgacggcgt cgttcgccgg ccagcaggag
     1141 acgtacctca acgttcgcgg cgaggagcgg ctactgcagg ccgtgcggga ctgcatggcg
     1201 tccctgttca ccgatcgcgc catcgtttac cgcgccgagc gcgggtttgc ccatcgcggc
     1261 gtcgcgctct cggtcgggat ccagaagatg gtgcggagcg acctcggctc cgcgggcgtg
     1321 atcttcacgc tcgacacgga gagcggcttt cgcgacgtcg tcgtgctcac gggcgcgttc
     1381 ggcctcggcg agacggtggt tcaaggcaag gtcgatccgg acgagttttg ggtgcacaag
     1441 ccggcgctcg gtaacggcta cccggcgata atccggcgcg agctcggcga gaaggcgatc
     1501 cggctcgtct acggcagcgg cggcaaccag gcgctcgtcg aggagcgtgt cccgctcgag
     1561 cagcgacggc agccgatcct gcccgacgag gacatcctga cgctcgcgcg ctgggcggtg
     1621 cgcatcgaag agcattactc caagcgcgcc ggtcgtccca cgccgatgga catcgaatgg
     1681 gcaaaggacg ggcgctccgg tcagctctac atcgtgcagg cacgccccga gaccgtgcac
     1741 gcgcagagcg gcccgcccaa gttcgagatg tttcgcctgc gcggcaaggg caagctgctc
     1801 gtgcaaggca agagcgtcgg cgcgaaggtc ggcaggggac gagtgcgcgt cgtccattca
     1861 ccccaagagc tcgctacgtt ccagcctggg gaagtcctcg tcgcgccgat gaccgatccc
     1921 gattgggagc cggtgctcaa gcacgcggcg gccgtcgtca ccgaccacgg cgggcgcacg
     1981 tgtcacgcgg cgatcgtgtc gcgcgagctc ggcatcccgt gtgtggtcgg caccggcaac
     2041 gccacgacgg cgctcgtcac gggcgacgaa gtgacggtct cgtgcgccga aggcgacgag
     2101 ggaaagatct acgcgggtcg cgtggaattc gatcgcgcgg agatcgaccc ggcgaagctg
     2161 cccgagccgc gggtgcccgt catgctcaac gtcggtaacc cggagaacgc gtttttactc
     2221 gggcagctgc cgagtgcggg cgtcggtctc ttgcgcatcg aattcgtcgt ctcgagcgcc
     2281 atcggcatcc accccatggc gctcgtccac cccgaacggg tgacgagccc ggaggccctg
     2341 gcgcaacttc gcaagcgaac cgctggtttc tcgtcgccga gcgacttctt cgtcgagggt
     2401 ttggcccatg gcgtcgcgca ggtcgcggcg gccttttacc cgcggcccgt catcgtgcgc
     2461 ttctccgact tcaagacgaa cgagtatgcc gggctcgtcg gtggcgccga tttcgagcct
     2521 cacgaggaca acccgatgat cggcttccgc ggcgcctccc gttattacga cgagcgctat
     2581 cgtgagggct ttgcgctcga gtgccaagcg atccgccagg tgcgcgaaga gctcggcctc
     2641 acgaacgtga aggtgatgat cccgttctgt cgcacgctcg aggaagggcg ccgcgtgctc
     2701 gccgagctcg cgcagaacgg gctcaagcgc ggcgaccacg agctcgaagt ctacgtgatg
     2761 tgcgagatcc cgaataacgt gatcctggcc gaggaattcg ccgagctctt cgacggcttc
     2821 tcgatcggct cgaacgatct gacgcagctc acgctcggca tcgatcgcga ctccgagatc
     2881 ctcgcgtccc tcttcagcga acgcgatccg ggcgtgatgc gttcgatcgc gctcgtcatc
     2941 gagcgagctc accgcaaaca ccgaaaagtc gggctctgcg ggcaggcgcc gagtgatcac
     3001 ccggacttcg cgacgttcct cgctgaccag ggtatcgact ctatttcggt gacgcccgat
     3061 gcgctcccgc tcgtgctcga gcttctggcg gtcaagccgg gctgagcggc gcctcctgcg
     3121 tgccggccgg caacgggtcc ctcggactcg agattagccg gctggcgccg cccgccggcc
     3181 gccggctgcc ttgggctcgg cgcctgcctt gaactcggag cgcaccgtat tcatgaacag
     3241 acgcagcaag tgacgccgtg tttccgcggg ggcctgctcg tcgacccagc ggtagagcgt
     3301 agcgtcttca tgctcggcgt gggcgcgcag catgttcacg agccgctcca ccgcccgctt
     3361 gcgcactgcg tggaggtcac agagcaggcc gagctcacag accacgtcgc ggatccggtc
     3421 gtgttcggag cgcatggcgc gcacgtcctc gggaaacgct tcctcggtca acgggaacag
     3481 ggactcttct tcgaactcga aatgtcggaa gagctcgtgc tcgaatcccg accaggcgag
     3541 ctgcaacgcg cgcggatcgg catcggcggc caaacgcaag agatcctgca gcgcgtctgc
     3601 gacggacgcg tgctggcgcc tcagttcttg gcggatctcg tccttgcgtg gcttgatcat
     3661 gatgccccgg cagtagcaag gggcaggccg cccccattcg ggcgaaaagg cccgactgtg
     3721 ccggctgcga gcggctgccg cgcgcattcc ttgcgcgggc ccctgcgcgc cgtgcaacgg
     3781 attcgccggc ccccgttgcc tctctatctc gccgtccacg ttcgcacggc ggctttgacg
     3841 cgagcttgaa cctcgggcgg gacctcctca tttccgattc gatggcaggc gagcaaagcc
     3901 tgcttgaggg cgtcacacgc gacgctgcac gcgggacagc cgcgcaggtg ttccgtcatc
     3961 gcttcacaat cggcctgatc gagctcgcct tcgagcttgc gcgaccacaa ggtcacgaca
     4021 tccgggcatc cgccggcagc gcccgcgcgc gtcggctcga gcagcgggcg cagcgcgtcg
     4081 cgcagactct ctcgcgctcg atgcaagcgg ctctttacgg cgtcgacgct gacgccgagc
     4141 gctgcggcgg cttcgggagc agacagcccc tccacgtcac gcagcagcac cacttcgcgg
     4201 tgagcgtcgg gcagggcgtc gagggctttc gacagcgcga gcgcgagttc ctggtcgccg
     4261 gcgcgctgct cgggcccggg ctcgggatcg ggtttggtgc cgagggcttc ggcgtcctcc
     4321 ggcgggcgat tcttcaggcc gcggcgcctg cgcgcgcaag cactgcgggt gagggcaaac
     4381 acccagctcg agagcgagga tcgtccctcg aagtcttgca ggtggccggc gatgttgagc
     4441 agagtgtctt gcaaaatgtc gtcggcgtcg tgcgcgttct tacacatgcg caggccgaag
     4501 cgatggatcg acggcgccac gctcgcgagc agctcctcga gcgcgtcgcg attgcccgcg
     4561 cgggcgcgcg cgacgagctc gctcgtgctg ggcggcggcg cgccggaact cgaagtcacc
     4621 aggggttcat agctgtgttg cgggcgcctg caaacgctgc ttcggccgac aaccgcgggc
     4681 gtgccgcgtg ccgtctacga cactttggtg cgcgccgttg ccgccacggt ctgatcgccg
     4741 tgcacggtga tcgtcccact cgcatcgacg gtgacggcga aatgcgtgag ggcctcttgc
     4801 gcgggaccgc gagtcacggt gccgttcgcg tcgaattggc tgccgtggca gctgcacacg
     4861 atgccgcccg gcgagacgtt gccgtcgacc gccatgttgc agccggcgtg agtgcaagtg
     4921 agcgtcatgg cgtaaagccc tttttcatcg cggccgaccg ccagggccag attgcccacc
     4981 ggctcgaggc ttccaacggg gtagctggag acgaggcccg cctggaccac gccgaccgca
     5041 tccggactag cgccggctgg gccggaacaa gcgctcccga gcgtccccgc ggcaccgccg
     5101 gcggctagga ccttgagtgc gatgcggcgc gagcaaatat gattctgcat gagatctcct
     5161 ggggcgattc gctccaaacg gaacgtcgcc gtgcacgcaa cggatgagtg ccgccagcgc
     5221 gcgccaggca ggcgaacgtc gcgtggcgga ggctctgtcg cccgacgact ccgggtgcaa
     5281 agcgtgcgcg ggtgcgccgt gtcgacgcaa gtgctgcaca cggacggcgc tccggccctc
     5341 tgattgcgca accgttcgaa gccttcggac tcgccgcctc agcgcgcccg ggtggttcgg
     5401 accttgctta gaggcatctt cgagtgcctc agcaggttca agatgaagat ccaatcgatc
     5461 ctggttcccg tggactattc ggagtgctcg gcagcggccg tcacgctcgc catcgaggtc
     5521 gcgagtaagt tcggtgcgga gctcgatgtc gttcacgttt gggaccgacc cacctatgtc
     5581 tcggaggaca tccaggtggg tcacggcgac ggcgctcact cgctgatcga gctcatccgc
     5641 gcgaacgcag agcgcgaaat ggcgcaattt atcgccgagc tcagcgtgcc gccgaggctg
     5701 aagtgctcga cccggctcct gtccggcaat ccggcggcca cgatcctcaa ggttttgcag
     5761 gacggcaagc accagctcct cgtcatggga acgcacggcc gaactggtct gcgtcacgta
     5821 ctgctcggga gcgttgccga gaagctcgtg cgtctctcac ccgtgccagt cctcaccgta
     5881 ccgcccgatc gggagtcgca gccgtgagca acatggccgg cacactcgtc cccggcatcg
     5941 acccgttggt gagcggcgtc aaacgcgacg cgcgcacgca tccgagcctg cgacgattcg
     6001 gcaagtacgc agtcgtcgcg ctgctcgtcg cgggggcggg gatcgcggcg atccgcattc
     6061 agcgcgctcc ccgggccccc gcgtttcagt tcgagtcagc taaggtcgac cgcggcgaca
     6121 tccacgcgaa agtgacggcg aacggcgcgc tttcggcgct cgtcacggtc aacgtcggca
     6181 gccaagtctc cgggcgcgta caaacgctgc tcgtggactt cggctcgagc gtcgagcggg
     6241 gtcaagtcgt cgccagcatc gatccgtcgc tgttcctcgc agccaaggcg caagccacgg
     6301 ccaaccacca ggccgccgtc gcctcggtcg ctcgggcgca agcacaggtg caaaatgcgg
     6361 agaagcagtt cgcgcgctcg ggctcgcttc agcgagaagg tctcacgacg agcgccgagc
     6421 tcgagacggc agaggcgaac ctggcggtcg cacgcgcgga cctcaacgtc gcgcgggcca
     6481 atgtgaatca aaccgccgcg acgagcgcgc aggcggagct gaacctcaag tacacgacga
     6541 tcgtctcgcc catcgacggc gtcgtcatct cgcgcaacgt ggacgtgggg caaacggtgg
     6601 cggctacgct gcaagcgccg acgctcttca cgatcgctca ggatctcacg cgcatgcagg
     6661 tcgacacgaa cgtcgccgag gccgacgtag gcaagatccg caagggcatg gaggcaacct
     6721 tcacggtcga cgcctacccg aagcgcgtat tccgaggtcg actgcggcaa gtgcgcgaca
     6781 acgcgcagac gcttcaaaac gtcgttactt acgacgcggt cgtcgacgtc gacaactccg
     6841 agcgcctgct caagccgggc atgacggcca acgtctcgtt cacttacgcc gatcggcaag
     6901 gcgtgccgcg catccgcaac gccgcgctgc gcttccgtcc cgagccggcc gcgctgaccg
     6961 agttcatgca aggacgtccg gtgccgaagc ccacgccgcc cgacggacgg ctcgtgtggc
     7021 ggctcgccgg gggcaaggcc gagccggtgg ccgtggaggc gggcgtgagc gacggcatgt
     7081 tcaccgagct cgtgtcgggc ccgctcaagc ccggtgacgc gctggtcgaa gaaatgcagg
     7141 cagacggcgc caagcggtcg ccatgagcac gcacga
//
LOCUS       DATIML010000463         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_673197, whole genome shotgun sequence.
ACCESSION   DATIML010000463 DATIML010000000
VERSION     DATIML010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673197"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VLJ38_08060"
     CDS             <1..582
                     /locus_tag="VLJ38_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39506.1"
                     /translation="DPPPPADAPPPADAGTPTPPDCSCQPSGTKACNLKIVACSVDQG
                     CPVGWTCNDNPNGTCTASADGASSCTADPAKICLPPYANLSLGGGRHAEDGSSTGVGV
                     GTGGASSGGVPTGTGGAGNASSGGTSNDVPPAGTPEAPTDTNGSKATSAPANAESDSG
                     CAVGHVRGGGSGAFGLLALAFAGLAGLRRRRSN"
     gene            complement(596..901)
                     /locus_tag="VLJ38_08065"
     CDS             complement(596..901)
                     /locus_tag="VLJ38_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HSU39507.1"
                     /translation="MTFVVTDNCKGCRFTDCVAVCPVDCFHGDGDMLYIDPGECIDCG
                     ACVPECPVEAIYDESQIPDDKKSWIKANADKAPGLPVINQKGEPLPGAEERKQTLGF"
     gene            1053..>2123
                     /locus_tag="VLJ38_08070"
     CDS             1053..>2123
                     /locus_tag="VLJ38_08070"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF014502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HSU39508.1"
                     /translation="MGHETVPLLAGTAHYWRLEPETWRPALEGVRGLGLKLVDTYVPW
                     GVHERGTGDFDFGRVDPKLDVVRFVKLAGELGLYVIVRPGPHINAELTCFGIPERVIW
                     TKECQAVSAGGKPVALPVPPLAFPVPSYASEAFHAEARVWFDAVGKELAPLIWPNGPI
                     VLLQVDNEGAMYFRDGVYDQDYHADALAHYRAFLKDKYDRVEVLRDVLGDPGATFFNV
                     EPPRRFNAQSKRDLARHLDWAEFQEELIAGAFKRYRAAMEQAGLGGVPTSHNLPLSEA
                     ATPLDPRRVGEAVELLGLDYYHGASPPQRTEIARRTSELDVRSAAREHPAFACELGAG
                     YPPFFAPLSEGDNAFTALTALAY"
BASE COUNT          324 a          731 c          725 g          343 t
ORIGIN      
        1 gaccctccgc cgcccgccga tgcgcctccg ccagcggacg ccggtacacc gacgccgccc
       61 gattgcagct gtcagccgag cgggaccaag gcgtgcaatc tcaagatcgt cgcgtgcagc
      121 gtcgatcagg ggtgccccgt cggttggacc tgcaacgaca atccgaacgg cacgtgcacc
      181 gcgagcgcgg acggggcctc gtcctgcacg gccgacccgg cgaagatttg tctgccgccg
      241 tacgcgaatc tctcgctggg cggcgggcgg cacgccgaag acggttccag caccggcgtt
      301 ggtgtcggca ccggcggcgc ctcgagcggc ggcgttccga ccggcaccgg cggcgccggc
      361 aatgccagca gcgggggtac ttcgaatgat gtaccgcctg cgggtacgcc cgaagctccc
      421 acggacacta acggctcgaa ggcgacctcc gcgccggcca acgccgagtc cgatagcggt
      481 tgcgccgtcg gccacgtgcg tggcggcggg agcggggcgt tcggattgtt ggcgctcgcg
      541 ttcgcggggc tcgccggtct gcggcgccgg cgctcgaact gagccgcgag cgggactaaa
      601 acccgagcgt ctgcttgcgc tcttccgcgc cgggcagcgg ctcgcccttt tgattgatca
      661 cgggcaggcc cggcgccttg tcggcgttcg ccttgatcca gctcttcttg tcgtccggga
      721 tctgcgattc gtcgtagatg gcttcgacgg ggcactccgg cacgcaggca ccgcagtcga
      781 tgcactcacc cggatcgatg tagagcatgt ctccgtcgcc gtggaagcaa tccaccgggc
      841 agacggcgac gcaatcagtg aaacggcagc ctttgcagtt gtccgtgacg acgaaagtca
      901 tggcttcgcc ttcctagcac tacttcggcg gtctttggca cgacaatatc gggatctttg
      961 ctcccgccgc ccaggtgcta gcctccggcc cccgaatggc cagggccgac aagaatgccc
     1021 aagaagtcgc gctcgtcccg ggaggtatcc gtgtgggcca cgagacagtg ccgctcttgg
     1081 cgggcacggc gcactactgg cggctcgagc ccgagacgtg gcgtccggcg ctcgaaggcg
     1141 tgcgcggcct cgggctcaag ctcgtcgaca cgtacgtgcc ttggggggtg cacgaacggg
     1201 gtacgggtga tttcgacttc gggcgcgtcg atccgaagct cgacgtcgtg cgcttcgtca
     1261 agctcgcggg cgagctcggg ctctacgtca tcgtgcggcc ggggccgcac atcaacgccg
     1321 agctcacctg cttcggcatc cccgagcgcg tgatttggac caaagagtgc caggccgtct
     1381 cggcgggcgg caagcccgtc gccttgcccg tgccgccgct cgcgttcccg gtgccgagct
     1441 acgcgagtga agcgtttcac gccgaggcgc gcgtgtggtt cgacgcggtc ggcaaagagc
     1501 tcgcgccgct gatctggccg aacggcccga tcgtgctctt gcaggtcgac aacgaaggcg
     1561 cgatgtactt tcgcgacggc gtctacgatc aggattatca cgccgacgcg ctcgcgcact
     1621 atcgcgcctt cttgaaggac aagtacgacc gcgtcgaagt gctgcgcgac gtgctcggcg
     1681 atccgggcgc gacgttcttc aacgtcgagc cgccgcgccg cttcaacgcg cagagcaaac
     1741 gcgacctcgc gcggcacctg gattgggcgg agtttcaaga agagctcatc gcgggggcgt
     1801 tcaagcgcta ccgcgccgcg atggagcaag ccggactcgg cggcgtgccg acctcgcaca
     1861 atttgccgct gagcgaagcg gcgacgccgc tcgatccgcg gcgcgtgggc gaagccgtcg
     1921 agctgctcgg cctcgactat tatcacggcg cttcgccgcc gcagcgcacc gagatcgcac
     1981 gccgcacctc cgagctcgac gtgaggagcg ccgcgcgcga gcatccagcg ttcgcgtgcg
     2041 agctcggcgc gggttacccg ccgttcttcg cgccgctcag cgagggcgac aacgccttca
     2101 cggcgctcac ggcgctcgcg tac
//
LOCUS       DATIML010000464         3796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_673294, whole genome shotgun sequence.
ACCESSION   DATIML010000464 DATIML010000000
VERSION     DATIML010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3796
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673294"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1038)
                     /locus_tag="VLJ38_08075"
     CDS             complement(<1..1038)
                     /locus_tag="VLJ38_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HSU39509.1"
                     /translation="MTQTQMTAAPPNDPSSFAAMFEATASGPSAALGGEGQIVSGVII
                     QVNRDSVVVDIGGKSEGVISKSEFADANGAIAIKAGDRVDVFIESRESDDGLISLSKE
                     KADKMKVWDEISAACERDEIIEGTISQRVKGGLSVTIRGGVKAFLPGSQVDLRPIRNL
                     EKLIGQTYEFKVIKFNKKRGNIVLSRRVLLERERDEMKAKTLQTLEEGMVVTGTIKNL
                     TEYGAFVDLGGIDGLLHITDMSWGRVAHPGEVFKVGDEVTVKVLRYNAETERVSLGLK
                     QTMDDPWEHASESYPIGKRIRGKVVSITDYGAFVEMEQGIEGLIHVSEMSWGKPKHPS
                     KVVEVGQVVDCQ"
     gene            complement(1181..2233)
                     /locus_tag="VLJ38_08080"
     CDS             complement(1181..2233)
                     /locus_tag="VLJ38_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39510.1"
                     /translation="MSAERVEAPARASESVARTDRGGALSFPVVMAVFGVLLALGVAL
                     GVTIHRRYVGFDRVAAHHVPSDTTLVVRWDVDKIALFEPTRRFLLPLLDAPRSGAPNS
                     ASAATVESLAGRRARFAHESGTLMNRDLREAVALFGPGAHDWAVILAGAFSQVDLLEA
                     AARTLQQEGWPWRRIAADRLVSPEGAALGRTADGALILASNLSRLDAVLVRRPALPEV
                     PRVGAGSLRLVPAASGLPAGTAPLLEMLGRPAEVTADAEWGSPLPIHLVLHFEGQPPA
                     DAKERVHHALELLLGEDLQRIERLEAPVSVQSAGNQDLRVTVLLDDIALEHAANRAAQ
                     AVARAFGTPVSEDLAK"
     gene            complement(2230..3162)
                     /locus_tag="VLJ38_08085"
     CDS             complement(2230..3162)
                     /locus_tag="VLJ38_08085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39511.1"
                     /translation="MSTYGVGHAAAPARARALLAGMLLSLGAACGGSRPAPPRAPALA
                     MPVDAVPPDLDLVLRVDLAMVRAALGPQGVASLRGEAEGAVAETREELVERALEASDT
                     AILALRPELLPHETDNVLVLAGHFAALGVDRALRASGWSAPVDLGGDVRRFDRGGKLS
                     RSSPARVYAFANERLVFVSAAEIDSVEAVLERQRAPSSLKPQSRGVLAFAARLRTLGT
                     TLVDRYPELADAIGPADAVQGVLDSTATGLGLEVALELPSEASAERTSAALGRIRQAL
                     AGAAGKMAAMAQSSNIQAVGRFAVVRVALERGML"
     gene            complement(3159..>3796)
                     /gene="cmk"
                     /locus_tag="VLJ38_08090"
     CDS             complement(3159..>3796)
                     /gene="cmk"
                     /locus_tag="VLJ38_08090"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF014300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HSU39512.1"
                     /translation="VATALGYFVVDTGALYRTVALACERAGIDFDDFERVGTLAEALV
                     AKEAVRLEGDAQGGSRVLLDGHDVSGAIRTQTLSQGASKVSAQPRVRAALLELQRSAG
                     RSGGVVLEGRDIGTVVFPDAEVKVFLTASVEERARRRFEQLRAAGVDADIEAVKREVE
                     ERDQRDSSRPIAPLRKAPDALVVDSSVLSIDQVVARIVARVREVAAELAAR"
BASE COUNT          591 a         1357 c         1270 g          578 t
ORIGIN      
        1 ttggcagtcc acgacttggc cgacttccac gaccttgctc gggtgcttgg gcttgcccca
       61 gctcatctcg ctgacgtgga tcaggccctc gatgccctgc tccatctcga cgaatgcgcc
      121 gtagtcggtg atcgaaacca ccttgccgcg gatgcgcttg ccgatggggt agctctcaga
      181 cgcgtgctcc cacggatcgt ccatggtctg cttgaggccc agcgacacgc gctcggtctc
      241 ggcgttgtaa cgaagcacct tgacggtgac ttcgtcgccg accttgaaca cctcgcccgg
      301 gtgcgcgacg cgaccccagg acatgtcggt gatgtgcaag aggccgtcga tgccgccgag
      361 atcgacgaac gcgccgtact cggtgaggtt cttgatcgtg cccgtgacga ccatgccctc
      421 ttcgagggtc tgaagcgtct tggccttcat ttcgtcgcgc tcgcgctcga gcaggacgcg
      481 gcgcgaaagc acgatgttgc cgcgcttctt gttgaacttg atgaccttga actcgtaggt
      541 ctggccgatg agcttctcga ggttccggat cgggcggagg tcgacctgcg agcccggcag
      601 gaacgccttc acgccgccgc ggatggtgac cgagagcccg cccttcacgc gctggctgat
      661 ggtgccttcg atgatctcgt cgcgctcgca cgcggccgag atctcgtccc acaccttcat
      721 cttgtcggcc ttctccttcg acaaggagat gaggccgtcg tcgctctcgc gactctcgat
      781 gaagacatcg acgcgatcgc ccgccttgat cgcgatggcg ccgttcgcgt ccgcgaactc
      841 gctcttcgag atcacgccct cgctcttgcc gccgatatcg acgacgaccg agtcgcgatt
      901 gacctgaatg atcacgccgg agacgatctg cccttcacca ccgagcgcag cgctgggtcc
      961 gctggctgtg gcctcgaaca tcgctgcaaa actcgagggg tcattgggcg gcgcggcggt
     1021 catttgggtt tgggtcatgg atcgaacgag tggctccggt ttatggtggg gtgcggtccg
     1081 cgtgacgcgg gcgagaacag ggcgtcctct cctcggggga ccgctcgggg acgcgtcacg
     1141 tagcgcacga gccgcccctc gtcaaacgca aactgatgga ctatttggcc aaatcttcgc
     1201 ttacgggcgt tccgaaggcc cgcgctacgg cctgggcggc acgatttgca gcgtgctcga
     1261 gggcaatgtc gtcgagcagc acggtcacgc gcaggtcctg attaccggct gactgaacgc
     1321 tgacgggcgc ctcgagccgc tcgattcttt ggagatcttc gccgagtagg agctcgagcg
     1381 cgtggtgaac acgctctttg gcgtcggccg gcggctgccc ctcgaagtgc aggaccaggt
     1441 gaatcggcaa cggactaccc cactcggcgt ccgccgtgac ctccgccggc cgaccgagca
     1501 tctcgagcaa cggcgccgtt cctgccggca acccagaagc cgctggcacg aggcgcaggg
     1561 agccggcgcc gacgcgcggc acctcgggca gcgccgggcg ccggacgagg accgcgtcga
     1621 gccgcgacag gttcgacgca aggatcagtg cgccgtccgc cgtccgcccg agcgctgctc
     1681 cctcgggcga taccagccga tcggccgcga tcctccgcca tggccagccc tcctgctgca
     1741 aggtacgcgc ggccgcctcg agcaagtcga cctgcgagaa agcgcccgcg aggatcaccg
     1801 cccaatcgtg cgcgccggga ccgaacagcg cgacggcctc gcgcagatca cggttcatca
     1861 gcgtgccgct ctcgtgcgcg aaacgcgcgc ggcggcctgc gagggactcg accgtcgctg
     1921 ccgacgcgct gttcggtgct ccgctgcgtg gtgcatcgag cagcggcaac aggaaccgac
     1981 gggtcggctc gaacagagcg atcttgtcga cgtcccagcg cacgacgagc gtcgtgtcgg
     2041 acggcacgtg gtgcgccgcc acgcgatcga acccgacgta gcgacgatgg atcgtcactc
     2101 cgagcgccac cccgagcgcg agcaacacgc cgaaaaccgc catcaccacg ggaaacgaga
     2161 gcgctccccc ccgatcggtg cgggccacgg actcgctcgc gcgcgccggc gcttcgacgc
     2221 gctcggcgct cacagcattc ctcgctcgag cgctacgcgt acgacggcga agcgcccgac
     2281 cgcttggatg ttcgagctct gcgccatggc cgccatctta cccgcggctc cggcgagcgc
     2341 ttgccgaatg cgaccgagag ccgccgacgt gcgctccgcg ctggcttcac tcggcagctc
     2401 gagcgccacc tcgagcccga ggcccgtcgc cgtcgaatcc aacacgcctt gcacggcgtc
     2461 cgcggggccg atcgcgtccg ctaactccgg gtaccgatcg acgagcgtcg tgccgagggt
     2521 gcgcagccgg gccgcgaacg cgagcacgcc acgcgactgc ggtttgagcg agctcggcgc
     2581 gcgctggcgt tcgagcacgg cttcgacgct gtcgatctcg gccgcggaca cgaagacgag
     2641 ccgctcgttc gcgaaggcgt acacgcgcgc cggcgagctc cggctgagct tcccgccgcg
     2701 atcgaagcgc cgcacgtcgc cgccgaggtc gaccggtgcc gaccagccgc tcgctcggag
     2761 cgcgcgatcg acgccgagcg cggcgaagtg cccggcgagc acgagcacgt tatcggtttc
     2821 gtgcggcaaa agctcgggcc ggagcgccaa aatcgcggtg tcgctcgctt cgagcgcgcg
     2881 ctcgacgagc tcctcgcgcg tctcggcgac ggcgccctcg gcctcgccgc ggagcgaagc
     2941 gaccccttga gggccgagcg ccgcgcgcac catggcgaga tcgacgcgca ggacgagatc
     3001 gagatcgggc ggcacggcat cgaccggcat cgcgagcgcg ggcgcacgcg gcggcgcagg
     3061 gcgcgagccg ccgcacgctg cgccgagcga caagagcatg ccggccaaga gcgcccgggc
     3121 gcgcgccggc gcggcggcgt ggcccacccc atacgtgctc atcgagccgc gagctcggcc
     3181 gcgacttcgc gcacgcgcgc cacgatgcga gcgacgacct gatcgatgga caagacggag
     3241 ctatcgacga cgagcgcgtc gggcgctttg cggagcggcg cgatgggacg cgagctgtcg
     3301 cgctggtcgc gctcttcgac ttcgcgtttg acggcctcga tgtcggcgtc gacgccggcc
     3361 gcgcggagct gctcgaaacg gcgccgcgcg cgttcctcga cgctcgccgt cagaaacacc
     3421 ttcacttcgg cgtcggggaa cacgaccgtc ccgatatcgc gaccttcgag cacgacgccc
     3481 ccggaacggc cagccgagcg ctgcagctcg agcaacgcgg cccgcacgcg cggctgcgcc
     3541 gaaaccttgc tcgcgccttg gctgagcgtt tgcgtgcgga tcgctccact cacgtcgtgc
     3601 ccgtcgagta gcacgcgcga gccgccctgc gcgtcgccct cgaggcgcac ggcctccttc
     3661 gcgaccagcg cttccgcgag cgtccccacg cgctcgaagt catcgaaatc gatccccgcc
     3721 cgctcgcacg cgagcgccac ggtgcggtag agcgcccccg tgtcgacgac gaagtaaccg
     3781 agcgccgtcg cgacgc
//
LOCUS       DATIML010000465         3363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5293310, whole genome shotgun sequence.
ACCESSION   DATIML010000465 DATIML010000000
VERSION     DATIML010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3363
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5293310"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..901)
                     /locus_tag="VLJ38_08095"
     CDS             complement(<1..901)
                     /locus_tag="VLJ38_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39513.1"
                     /translation="MAKQSTPARLSRTPLAFTAALASSLLAAALAQPARAADPRVGFR
                     EPRDVTDGFSVTPRLDAENASFSAVPLPRAPSVVFQVRVAPPITGEPVADSAGGLLLA
                     HGRDRVSALDAKGRSLWSVRLGSELASGPLPFGAAKYLLVGRDGRLFEVSSAGAVSEA
                     SPLPWNGVDGPVLYAPTSDGGAIVANGARLARVAPAAARGFELKLKTLVRAVFEWRGA
                     TLAVGRDGSIWLRGTAGDVRKLGGFDAPLVQALLVGDRLLGLTQHELLSLDLATKQAS
                     VLWAEPALELRDIASAAGKRTRLI"
     gene            complement(906..3014)
                     /locus_tag="VLJ38_08100"
     CDS             complement(906..3014)
                     /locus_tag="VLJ38_08100"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39514.1"
                     /translation="MTLGGPSLASPCRRCGTTNPSFAKFCANCGQAVVNVLLSTLPPT
                     ERAVAKAPSIPPSANVRELHLADPLIGRLIAERYRVLELIGRGGMGVVYKAEHARIGK
                     VLALKLLTGELTRDHGQLARFKREAEMSSRLSHPNTVQVFDFGEADGLAYLAMEYVRG
                     RDLGEVVSEAGRLAPERTAKLVVQVCSSLSEAHDKGIVHRDLKPENIMVVASQAGEDI
                     AKVLDFGLAKLRESSELSDVTSGGAIVGTPYYMAPEQIRGEAVTPACDVYALGAVLYA
                     CLTGVVPFDAATPMGVLTRHLVEEPVPPNVRVPELSLSRNFERLILTALAKNPSDRFP
                     TAAALQSALVDELRGTGGSVAILLDSSQLRGLTEEEQAATRDEVERYERKLRRRSYFT
                     WGLAGVALLLAVAGAVRTYVTLFSPPPFQGFELEPNNSASEARLLPFPLDVRGHLGQR
                     IDRQRSDRDFFKITIPPGSATFHLVFEPVPNLAACVSLYPPDAQEPSGRYCTGAPDVS
                     LDVNALRLTPGAWIVAVMQDRETYFESGPPPVYENISDEYRLRLEPSTATPEREIEPN
                     DGPPLGNLVSVGGTLHGTLAWARDVDLVCAPKSAARVRFSVEDSPDHPRNHYSVLEVT
                     SRGGPNNGIPVRVHHGGASVPASPRDVVGSWRGPWVVVDPRAPPCVELTLTPNPWGPA
                     PPAVVAIPGNEEYLVRLEGA"
     gene            complement(3011..>3363)
                     /locus_tag="VLJ38_08105"
     CDS             complement(3011..>3363)
                     /locus_tag="VLJ38_08105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39515.1"
                     /translation="RVQSLAAEATALRANATHDYAALEADPDAQRGLTVALDGTVVEA
                     RADAFTTVLLFDVKSGCTHPPCLARVSLGEKTAFKEGTPLSVFGSVSGAVDGPHQGTR
                     IPAVAADFVVKGHP"
BASE COUNT          521 a         1116 c         1219 g          507 t
ORIGIN      
        1 cgatcaagcg tgtgcgcttg cccgccgcgc tggcgatatc gcgcagctcg agcgccggct
       61 ccgcccagag gacgctcgct tgcttggtcg ccaggtcgag gctcaagagc tcgtgttgcg
      121 tcagaccgag caggcgatcg ccgaccagca acgcctgcac gagcggggcg tcgaagccgc
      181 cgagctttcg gacgtcgccg gccgtgccgc gcagccaaat cgagccgtcg cggccgacgg
      241 ccagcgtggc gcccctccat tcgaagaccg cgcggacgag cgtcttcagc ttgagctcga
      301 acccgcgcgc ggcagcgggc gccacgcgag ccagtcgtgc tccgttcgcg acgatcgcgc
      361 cgccatcgct cgtcggcgcg tagagcacgg gtccgtcgac gccattccac ggcagcgggg
      421 aagcttcgct cacggcgccg gcgctcgaga cctcgaacag ccgcccgtca cgcccgacga
      481 gcaggtactt agccgctccg aacggcagcg gcccgctcgc gagctcgctg ccgaggcgca
      541 cggaccagag cgagcggccc ttggcgtcga gtgcagaaac gcgatcacgt ccatgcgcga
      601 gcagcaggcc ccccgcgctg tcggcgacgg gctccccagt gatcgggggc gccacgcgca
      661 cctgaaacac gacactcggc gcgcgcggca gcggcacggc gctgaaactc gcgttctcgg
      721 cgtcgagccg cggagtcacg ctgaagccgt ccgtcacgtc acgcggctct cgaaagccga
      781 cgcgcgggtc ggccgcgcgc gccggttgcg cgagcgcagc agcgagcaga gagctcgcga
      841 gcgcggcggt gaacgcgagt ggcgtcctcg aaagccgcgc gggcgtgctt tgcttcgcca
      901 tcgcctcacg ctccttcgag ccggacgagg tactcttcgt tgccggggat ggcgacgacg
      961 gcaggcggcg cgggtcccca ggggttcggc gtgagcgtga gctcgacgca cggcggtgct
     1021 cgtggatcga cgacgaccca cggcccccgc cagctgccga ctacgtcacg gggtgaggcc
     1081 ggcacgctgg cgcccccgtg gtgcacgcgc acgggaatgc cgttgttcgg gccgccgcgc
     1141 gaggtgacct cgagcacgga gtagtggttg cgcggatgat cgggcgaatc ttcgacgctg
     1201 aagcggactc gggcggcgct cttcggcgcg cagacgagat cgacgtcgcg cgcccatgcg
     1261 agcgtgccgt ggagtgtccc gcccacgctg accaagttgc cgagcggcgg gccgtcgttc
     1321 ggctcaattt cgcgttcggg cgtggcggtc gaaggctcga ggcgcaggcg atactcgtcg
     1381 gaaatgtttt cgtagacggg cggcggtccc gactcgaagt acgtctcacg gtcctgcatc
     1441 accgcgacga tccacgcgcc gggcgtgagc ctgagcgcgt tcacgtcgag gcttacgtcg
     1501 ggagcgcccg tgcaatagcg ccccgacggc tcctgcgcgt cgggcgggta gagcgagacg
     1561 caagccgcga ggttcggcac gggctcgaaa accaagtgga acgtagcgct acccggcggg
     1621 atcgtgattt tgaaaaagtc ccggtcgctt cgctggcgat cgatgcgttg gccgaggtgt
     1681 ccccgcacgt cgagcggaaa cggtaagagc cgcgcctcgc tcgcggagtt gttcggttcg
     1741 agctcgaagc cctgaaacgg cggtggcgag aagagcgtga cgtaggtgcg gacggcgcca
     1801 gcgacagcga gcaggagagc aacgcccgct agtccccacg tgaaatagct gcgtcgacgg
     1861 agcttgcgct cgtagcgttc gacctcgtcg cgtgtggcgg cctgctcttc ttcggtgagc
     1921 ccgcgcagct gcgacgagtc gagcaagatg gcgacgctac cgcccgtgcc gcgcagctcg
     1981 tcgacgagcg cgctctgtag ggcggcagcc gtcgggaaac ggtcgcttgg gttcttggcg
     2041 agcgccgtca ggatcaggcg ctcgaagttg cgcgacaggc tgagctccgg aacgcgcacg
     2101 ttcggcggca ccggctcctc gacgaggtga cgcgtgagca cacccatcgg cgtcgcggcg
     2161 tcgaacggca ccacacccgt gagacacgcg tagagtacgg cgccgagcgc gtagacgtcg
     2221 caagcgggcg tcacggcctc gccgcgaatt tgttcgggcg ccatgtagta cggcgtgccg
     2281 acgatggcac ctccggacgt cacgtcggag agctcgctcg attcgcgcag cttcgcgagg
     2341 ccgaagtcga gcactttggc gatgtcttcg cccgcctggc tcgcgacgac catgatattt
     2401 tcgggcttga gatcgcggtg cacgatgccc ttgtcgtgcg cttcgctgag cgagctgcag
     2461 acctggacga cgagcttggc cgtgcgctcg ggcgcgagcc ggcccgcttc gctcacgacc
     2521 tcgccgagat cgcgcccgcg cacgtactcc atggcgaggt aggcaagtcc gtcggcttcg
     2581 ccgaaatcga agacttgcac cgtgttcggg tgcgacagtc gactggacat ttccgcctcg
     2641 cgcttgaagc gcgcgagttg gccatgatcg cgcgtgagct cgcccgtgag cagcttcaag
     2701 gcgagcactt tgccgatgcg ggcgtgctcg gccttgtaga cgacgcccat gccgccgcgc
     2761 ccgatgagct cgagcacgcg gtagcgctcg gcgatcaagc gcccgatcag cggatcggcc
     2821 aaatggagct cgcgcacgtt ggccgagggt gggatcgaag gagccttggc gaccgcgcgc
     2881 tcggtcggag gcagcgtgct caggagcaca ttgacgacgg cctggccgca gttggcgcag
     2941 aatttcgcga aactcggatt ggtggtgccg cagcgacgac agggggaggc gagggagggc
     3001 cctccgagcg tcacgggtgg cctttgacca cgaaatccgc cgcgacggcg gggatgcgcg
     3061 tgccctggtg cggtccgtcg acggcgcccg acaccgaccc gaacacgctg aggggcgtgc
     3121 cctccttgaa cgcggtcttt tcgccgaggc tcacgcgcgc gaggcagggg ggatgtgtac
     3181 agccgctctt cacgtcgaac agcagcacgg tggtgaatgc gtccgcgcgg gcttcgacga
     3241 cggtgccgtc gagcgcgacg gtgaggccgc gctgggcgtc aggatcggct tcgagcgccg
     3301 catagtcgtg ggtcgcgttg gcacgcagcg cggtcgcttc ggccgccagg ctctgcacgc
     3361 gtc
//
LOCUS       DATIML010000466         2281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_94400, whole genome shotgun sequence.
ACCESSION   DATIML010000466 DATIML010000000
VERSION     DATIML010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94400"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1863
                     /locus_tag="VLJ38_08110"
     CDS             <1..1863
                     /locus_tag="VLJ38_08110"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSU39516.1"
                     /translation="RDVTARVEVELALQRSNHVRTMLGAVNGAILRVKERELLLQECC
                     RIAVEDGGLLLAALVLLDHDGAVETVASHGADDRFVERLTHAMVAEATPSMLAAALAD
                     RQPHVSRDPKADLDARLARDVARRGGQAVGVFPLSAEGRAVGALVLVSDQADLFDGEE
                     LRHLGELADNVAFALDHLQKSARLDFLAYYDELTGLPKRNLLMNRLLEAMPPAEASGR
                     VALLLVEISRFRQVNATLGRGAGDDLLVQVGRRLTKLVGEGELLARFESSTFAILLTD
                     AGDDAALAAWVEHGIFGSFDAPFNVRSTELRISACVGLAVLPTDSSDADRLIQSAEAA
                     LANARTSGQRYLFHAPHMNERVSEKLTLETRLRRALEQEQFLLYYQPKIDLKSGMVVG
                     LEALIRWDDPERGLIAPAEFVPILEETGLIVDVGDWVLCTVAAQCAAWLDEGLLPPRI
                     AANVSAMQLSQRSFVRSVERAFELWPAARGGLDLELTESVLIDDLVGNIEKLRQLKEQ
                     GVCVAIDDFGTGYSSLGYLSRLPIDALKIDQSFILRMSDDPQNMTIITTIISLAHSLD
                     MKVIAEGVESSEQARLLKLVKCDQIQGFLVGKPQGAHEVRTLFRSNTRTWPPPA"
     gene            complement(1878..>2281)
                     /locus_tag="VLJ38_08115"
     CDS             complement(1878..>2281)
                     /locus_tag="VLJ38_08115"
                     /inference="COORDINATES: protein motif:HMM:NF020917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043231 - intracellular membrane-bounded
                     organelle [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HSU39517.1"
                     /translation="PVNLVSVREGGPYAVRADMLLDGERAAGYRATLCRCGGSKNKPF
                     CDGTHKTIPFTATGEPPTGVADMLPVRDGELAIDPLTDGPLQVRGNLEITSGTGRVVA
                     RVTSAKLCRCGGSANKPFCDGTHARIGFRSS"
BASE COUNT          355 a          803 c          747 g          376 t
ORIGIN      
        1 cgcgacgtga cggcgcgcgt cgaagtcgag ctggcgctac agcgctccaa ccacgtgcgc
       61 acgatgctcg gcgccgtgaa cggcgcgatc ctgcgcgtca aagagcgcga gctcctgctg
      121 caagagtgct gtcgcatcgc cgtggaggac ggagggctcc tgctcgctgc cctcgtgctt
      181 ctggaccacg acggagcggt cgagaccgtg gcgtcgcacg gcgccgacga ccgcttcgtc
      241 gaacgcttga cgcacgccat ggtcgccgaa gcgactccgt cgatgctcgc cgcggcgctc
      301 gcggaccggc agccgcacgt ctcgcgcgat ccgaaagcgg atctcgacgc gcggctcgcg
      361 cgcgacgtgg cgcgccgggg cgggcaggcc gtcggggtgt tcccgttgag cgccgagggc
      421 cgcgcggtcg gcgcgctcgt gctcgtgtcc gaccaggcgg atcttttcga cggtgaagag
      481 ctgcggcact tgggcgaact cgccgacaac gtcgcgttcg ccctcgatca cctccaaaag
      541 agcgcgcgcc tcgatttcct cgcgtactac gacgagctca cgggcctgcc gaagcgcaat
      601 ctcctgatga accgcctgct cgaggccatg ccgcccgccg aggcgagcgg gcgcgtcgcg
      661 ctcttgctcg tcgagatcag ccgttttcgc caggtgaacg ccacgctcgg tcggggcgcc
      721 ggcgacgatc tcttggtgca agtcggccgc cggctcacga agctcgtcgg cgagggcgag
      781 ctgctcgcgc gcttcgaaag cagcaccttc gcgatcctgc tcaccgacgc cggcgacgac
      841 gccgcgctcg ctgcttgggt cgaacacggc atcttcggct cgttcgacgc gccgttcaac
      901 gtgcgcagca ccgagctccg catttcggcc tgcgtcggac tcgccgtgct gcccacggac
      961 agcagcgacg ccgatcgctt gatccagagc gccgaggcgg cgctcgccaa cgcgcgcacg
     1021 agcggtcagc gttacctctt tcacgctccg cacatgaacg agcgcgtcag cgagaagctc
     1081 acgctcgaga cgcgactgcg ccgcgcgctc gaacaagagc agttcctgct ctattatcag
     1141 cccaaaatcg acctgaaatc cgggatggtg gtcggactcg aggcgctcat ccgctgggac
     1201 gatcccgaac gcgggctgat tgcccccgcc gagttcgtcc cgatcctcga ggagaccggg
     1261 ctcatcgtgg acgtcggcga ctgggtgctc tgcaccgtcg cggcacaatg cgcggcttgg
     1321 ctcgacgaag ggctgttgcc gccgcgcatc gcggccaacg tctccgccat gcagctttcg
     1381 cagcgctcgt tcgtccgctc ggtcgagcgt gcgttcgagc tctggcccgc ggcgcgtggc
     1441 ggcctcgatc tggagctcac cgagagcgtc ctgatcgacg atctggtcgg caacatcgaa
     1501 aagctgcgcc agctcaagga gcaaggcgtg tgcgtcgcca tcgacgattt cggcaccggc
     1561 tactcctcgc tcggctactt gagtcgcttg ccgatcgacg cgctcaaaat cgatcagtcg
     1621 ttcatcttgc gcatgtcgga cgacccgcag aacatgacga tcatcacgac catcatctcg
     1681 ctcgcgcatt cgctcgacat gaaggtcatc gcggagggcg tcgagtcgag cgaacaggcg
     1741 aggctgctca agctcgtcaa gtgcgaccaa atccaggggt tcctcgtcgg caagccccag
     1801 ggcgcgcacg aggtgcgcac gctcttccgc tcgaataccc gcacttggcc accgcccgcg
     1861 tagtcggttc gggggcgcta actagagcga aacccgatcc gcgcgtgcgt gccgtcacag
     1921 aagggtttgt tcgcgctgcc gccgcagcga caaagcttgg cgctcgtcac gcgtgccacg
     1981 acacggcccg tgccgctcgt gatctcgaga ttcccccgca cctgcagcgg gccgtccgtg
     2041 agcggatcga tcgcgagctc gccgtcgcgc accggtagca tgtcggcgac gcccgtgggc
     2101 ggttcgcccg tcgccgtgaa cgggatcgtc ttgtgcgttc cgtcgcagaa cggcttgttc
     2161 ttcgagccgc cgcagcgaca caacgtcgcg cggtagccgg ccgcgcgttc accgtcgagc
     2221 agcatgtccg cgcgcaccgc gtacggcccg ccctcacgca cgctgacgag gttcacgggc
     2281 g
//
LOCUS       DATIML010000467         4687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_674253, whole genome shotgun sequence.
ACCESSION   DATIML010000467 DATIML010000000
VERSION     DATIML010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_674253"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            415..2829
                     /locus_tag="VLJ38_08120"
     CDS             415..2829
                     /locus_tag="VLJ38_08120"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSU39518.1"
                     /translation="MKFTYDTGIRRKLFSNARLCGSWDASGRYSERWSERPMREVIAP
                     DGAVVFEADVELQPSEVGKEFLWAVLHDGPLGLDREGIVTEQHGLGHDALHRKFVLTD
                     DPRQEERYYLTHVRRLGARKVRVPGSDEPGLRFAVWAPNAQGVEVVFGDPKHGYVADD
                     GTGIDPGRPVFVLEKREEGVWSTGPEQAAALRRFRDFAGAPYMYRIKNEDGRVVYRTD
                     LHSRAQVGTGDKNPEGKPYEGTPAELNGVVACSVVVDTELVQADPSPGADPNALVSED
                     EFWRDEFNHLTPFPHRIDDFVIYELHVGSLGFGSDRPGNFHDAIALVDYLTELGVNAV
                     ELLPIAEANGTRTWGYGNSHHFAIESSAGGRDLFRHFVRACHQRGIAVIVDVVYNHYV
                     PNGERAQWHYDSDREENNVYYWYEGKPSDYPAPDGGYLDNLSTGFAPRFHEEMVRKLF
                     ISSAAALVMDFHVDGFRVDQTTSIHAYNVVHADGRPAGGANLAGAKFLRELSRTLRLL
                     RPATLLTCEDHSDWVLVTEHPDGAGLGFDATWYSNFYHNLIGDTGRGPECANLLKTAG
                     MGGNGELALSRFAEILETTKRKTVVYHESHDEAGNSEHSARTLMVAINADGSAPAPTG
                     DLRRIAEARVRFVAGMTLLSAGTPMFLMGEEIGATKDFTYDGFLENREDLLGERQGNG
                     RFLFRFYRDLIRLRRRHHTFATANIEIMLVHDADRVLAFHRWNGPEHYIVVSTLRDDA
                     WTEGYDVPVPNDAQGNWRELFTSDADIYGGSGVTNEETLDVVEGKLKVKVPARGFVVL
                     RHVPQT"
     gene            complement(3016..3828)
                     /locus_tag="VLJ38_08125"
     CDS             complement(3016..3828)
                     /locus_tag="VLJ38_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39519.1"
                     /translation="MNGDPVRLLEGGELTADERRALGADRTSASPLGAKRAIWAALTL
                     KLAAPATAAAAALSTGAPATVSGASAVATASSITAIALVKSATLGVALGAAVGTGLYF
                     GARSEAPRAVPAVTQSRGVENLGATAVRAPFHAAARPSSGPPAAAPSDSAPPVRAAPP
                     LGEPPPAHVEVSAPARPPAPPPIESESRRVAAARALLRSGNAGAALASLDALARDEPN
                     GLLVQERDALVVEALAALGRRDSARAHADAFLARYPRSPHTTAVRRAAGYAP"
     gene            complement(3825..4358)
                     /locus_tag="VLJ38_08130"
     CDS             complement(3825..4358)
                     /locus_tag="VLJ38_08130"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39520.1"
                     /translation="MTFEDLYEQNFEFVWRTLRRLGVPAADLPDVAQEVFLVVHRRLA
                     DFEERGKVTAWLFRISARAARDRRRRAHVRREVAADGPLAEAPDPGPDPSVSLERAGD
                     RALLEQALSALDQDQREVFTAFELEGLSGQAIATALEIPLGTVYSRLRLGRERFRQGV
                     ARVLAAHSRTRFRLEGA"
     gene            complement(4440..>4687)
                     /locus_tag="VLJ38_08135"
     CDS             complement(4440..>4687)
                     /locus_tag="VLJ38_08135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39521.1"
                     /translation="GVIGGDGRGFDHHYPTHEPWFGAGPVFTLRLPLTRAFALRFGAA
                     AVVTLGDHTFRVEGYGKAFDSPPLSAALSVGPELTIW"
BASE COUNT          795 a         1543 c         1645 g          704 t
ORIGIN      
        1 aatcgaggta gccggcgatg gcggcctcga gcacgcggta ggcgtgcggg cgatcgtagc
       61 tgccggcgac cgtcgcgcgc ggcgcctcgt tcgcgcacga gtgcgtaagt catgaaaggg
      121 tgaatcaaac gatcgacaac gttttgggca attccaaacg tcgtgcgtgg cgtcgaacac
      181 tgacgggcga cgcgcgtgcg aggcaaattg ttacccagtg cggccggatg acactccgct
      241 agctccgcgc gctgccacga cggaacgctg gaaacgaacg cgcaaacgag cagggatcgc
      301 cgagcgagcg agctcaggca tgcatgacgc ctagagcgcg cacgcgcaaa acgagagcgg
      361 cactgcaatt gcaataggtc gcgaggcgcc gactggctgg gcgcgctcaa gacgatgaaa
      421 ttcacctacg acacggggat tcgaaggaag ctcttctcga acgctcggct ctgcggcagt
      481 tgggacgcga gcggtcgtta cagcgagcgt tggagtgagc ggccgatgcg cgaagtgatc
      541 gcgccggacg gcgccgtcgt cttcgaggcc gacgtagagc tccagccgtc cgaggtgggc
      601 aaggagtttc tctgggcggt actccatgac gggccgctcg ggctcgaccg cgagggcatc
      661 gtcaccgaac aacacggact cgggcacgac gcactgcacc gcaagttcgt gctgaccgac
      721 gacccgcgcc aagaggagcg ctactacctg acgcacgtgc gcaggctcgg cgcacgcaag
      781 gtgcgtgtgc cgggcagcga cgagccgggg ctacgtttcg ccgtgtgggc gccgaacgcc
      841 cagggcgtcg aggtggtgtt cggggatccc aagcacggct acgtcgccga tgacggcacc
      901 ggcatcgacc cggggcggcc cgtcttcgta ctggagaagc gcgaggaagg cgtgtggtcg
      961 accggaccgg agcaggcagc cgcgctccgg cgcttccgtg acttcgcggg cgcgccctac
     1021 atgtaccgca tcaagaacga agatgggcgc gtcgtctacc gcacggactt gcactcgcgc
     1081 gcgcaagtcg ggaccggcga caagaacccc gagggcaagc cgtacgaggg cacgcccgcg
     1141 gagttgaacg gcgtcgtcgc gtgttcggtc gtcgtcgaca cggagctcgt gcaagccgac
     1201 ccatcgcccg gcgccgatcc gaacgcgctc gtctcggaag acgagttttg gcgtgacgag
     1261 ttcaatcacc tgacgccctt cccgcaccgc atcgacgatt tcgtgatcta cgagctgcac
     1321 gtcggctcac tcgggttcgg cagcgatcga ccgggcaatt ttcacgacgc catcgcgctc
     1381 gtcgattact tgaccgagct cggcgtcaac gccgtcgagc tcttgccgat cgccgaagcg
     1441 aacggcacgc gcacctgggg ctacggcaac tcgcaccact tcgcgatcga gtcgagcgcg
     1501 ggcgggcgcg acttgttccg gcacttcgtg cgagcgtgcc atcagcgcgg catcgcggtc
     1561 atcgtagacg tagtttacaa ccactatgtc ccgaacggcg aacgtgccca gtggcactac
     1621 gactcggacc gcgaagagaa caacgtttac tactggtacg aaggcaagcc gtccgactac
     1681 cccgcgcccg acggcggcta cctcgacaac ctctcgaccg gatttgcgcc gcgttttcac
     1741 gaagaaatgg tgcgaaagct cttcatcagc agcgcggcgg cgctcgtgat ggactttcac
     1801 gtcgacggct tccgcgtcga ccagacgact tcgattcacg cgtacaacgt cgtgcacgcc
     1861 gacgggcgtc ccgcgggcgg cgcgaacctc gccggcgcga agtttctgcg cgagctcagc
     1921 cgtacgctcc ggctcctgcg gcccgcgacg ttgctcacct gtgaggacca ttccgactgg
     1981 gtgctcgtga cggagcatcc ggacggcgcc ggactcggct tcgacgcgac gtggtactcg
     2041 aacttttacc acaacctcat cggcgacacg ggccgtggcc ccgagtgcgc gaacttgctc
     2101 aaaactgcgg gcatgggcgg taacggcgag ctcgcgctca gccgctttgc cgaaatcctg
     2161 gaaaccacca agcgtaagac cgtcgtttat cacgagtcgc acgacgaagc gggcaactcc
     2221 gagcattcgg cgcgcacgct catggtcgcc atcaacgcgg acggtagcgc gcccgcgccg
     2281 accggcgatc tccgtcgcat cgccgaggca cgcgttcgct tcgtggcggg gatgacgctg
     2341 ctctccgcgg gcacgcccat gtttctcatg ggcgaagaaa tcggggcgac caaggatttc
     2401 acgtacgacg ggttcctcga aaatcgcgag gatttgctgg gcgaacgcca aggcaacggg
     2461 cgcttcctgt tccgcttcta tcgcgatttg atccgcctgc ggcgccgcca tcacacgttc
     2521 gcgacggcga acatcgaaat catgctcgtg cacgacgccg atcgcgtgct cgcgtttcat
     2581 cgctggaacg ggccggagca ctacatcgtc gtttcgacgc tgcgcgacga cgcttggacg
     2641 gagggctacg acgtgccggt accgaacgac gcgcagggca actggcgcga gctcttcacg
     2701 agcgacgcgg acatttacgg cgggtccggc gtgacgaacg aggagacgct cgacgtcgtc
     2761 gagggcaagc tcaaggtgaa ggtgccggct cgcggcttcg tcgtgctccg gcacgtgccg
     2821 caaacctgac gggcagggag aagaaagccg ccaagagcgc caagattttt gagtattgag
     2881 agccgcagca atcacggctc cgatgacggc gcgaggccga caaccaagct ccgttccgag
     2941 ttcaaccctt ccggccttgg cgcccttggc gacttggcgg ttcaactccc tttgccggcg
     3001 ccgtgcggtc gcgatttacg gcgcgtaacc cgccgcgcgc cgtacggcgg tcgtgtgcgg
     3061 gctccgcgga tagcgcgcga ggaacgcgtc ggcgtgcgcg cgggcactgt cgcgacggcc
     3121 gagggcggcc agcgcttcca cgacgagcgc gtcgcgctct tggacgagca agccgttcgg
     3181 ttcgtcacgc gcgagggcgt ccagcgaagc gagcgccgcg ccggcgttgc cggagcgaag
     3241 cagcgcgcgg gcggcggcga cgcgacggct ttcgctttcg atgggcggcg gcgcgggcgg
     3301 gcgcgccggc gccgaaactt cgacgtgcgc tggggggggc tcgccgagcg gcggcgccgc
     3361 gcggacgggc ggcgcgctgt cgctcggggc cgccgcaggc ggcccgctgc tcgggcgtgc
     3421 cgcggcgtgg aacggtgcgc gtacggcggt cgcccctaaa ttctcgactc ccctactctg
     3481 cgtgacggcc ggcaccgcac gcggcgcttc gctccgcgcg ccgaagtaga ggcccgtgcc
     3541 gacagcggca ccgagcgcca cgccgagcgt cgccgatttg acgagcgcga tggccgtgat
     3601 cgagctcgcg gtcgccacgg ctgaggctcc gctcaccgtc gcaggcgcgc cggtcgacaa
     3661 cgccgccgcc gctgccgtgg ccggtgccgc gagtttgagc gtgagcgcgg cccagatggc
     3721 tcgtttggca ccgaggggcg aggccgacgt ccgatcggcc ccgagcgctc gccgctcgtc
     3781 ggccgtgagc tcgccgccct cgagtaggcg caccgggtcg ccgttcatgc gccctccaga
     3841 cgaaagcgtg tccggctgtg agccgcgagc acgcgcgcga caccttgcct gaagcgctca
     3901 cggccgagtc gcaaacgcga gtagacggtg ccgagcggaa tttcgagcgc cgtggcgatg
     3961 gcttggccgc tcaggccttc gagctcgaac gcggtgaaca cttcgcgctg atcctggtcg
     4021 agcgccgaga gcgcttgttc gagcagggcg cgatcgccgg cccgttcgag cgacacactg
     4081 ggatcggggc ccggatcggg cgcttcggcg agcgggccgt cggccgcgac ttcgcgcctg
     4141 acgtgcgcgc ggcggcggcg atcacgcgcg gcgcgggcgg agatgcggaa gagccacgcg
     4201 gtcaccttgc cgcgctcctc gaagtcggcg agccggcggt gaaccacgag gaagacctcc
     4261 tgcgcgacat ctggcagatc ggccgcaggg acgcccaggc gccgcagcgt tcgccagacg
     4321 aactcgaagt tttgttcata gaggtcttcg aaggtcatac cgtgcctggc cacggagcct
     4381 cggagcggcc cgggcggctc ggactacgtt ctatcaaggg caggccgtgc gttcgtccat
     4441 caccaaatcg tcagctcggg gccgacggag agtgcggccg agagcggcgg gctgtcgaaa
     4501 gccttgccgt agccttccac gcggaaggta tggtcaccga gcgtgacgac ggcggcggcg
     4561 ccgaaacgga gcgcgaaggc gcgcgtgagc ggtaaacgca gggtgaagac ggggcccgcg
     4621 ccgaaccagg gctcgtgcgt cgggtagtgg tggtcgaagc cgcggccgtc gccgccgatg
     4681 acgcccg
//
LOCUS       DATIML010000468         2038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1828803, whole genome shotgun sequence.
ACCESSION   DATIML010000468 DATIML010000000
VERSION     DATIML010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1828803"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VLJ38_08140"
     CDS             <1..352
                     /locus_tag="VLJ38_08140"
                     /inference="COORDINATES: protein motif:HMM:NF013624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39522.1"
                     /translation="VERLAVNVAHARIRDNAGARPIDDELVPGGDAARRVTFDPRTAA
                     NAAIAAGCPCDVSSHAGTFCCNAALYHALGQAAALPSRPRVAFVHVPSRFPWARDRRA
                     ARGIYAIAAHLARL"
     gene            409..711
                     /locus_tag="VLJ38_08145"
     CDS             409..711
                     /locus_tag="VLJ38_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HSU39523.1"
                     /translation="MATMITEECINCGACEPECPNEAISEGDDIYVIDPNLCTECVGF
                     HDYEACQAVCPVECCIPDPNNVEAEETLYGRAKKLHPDKQFPELAALPANLSRFRK"
     gene            complement(770..>2038)
                     /locus_tag="VLJ38_08150"
     CDS             complement(770..>2038)
                     /locus_tag="VLJ38_08150"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HSU39524.1"
                     /translation="AAALGAAREQLIQLEDALSSLGHDSLKLYEELELAQEAVTRLKV
                     EAGAAQEKKSSLDKQLFRLTADGDEKRARRVRLEENIRVGEARATELREKVATTREEL
                     LRSAEERARAAEELALKRTAHDERRGQLSHAEGELKGIRGELDGHAGEVTRLEVKRHD
                     LHAAKTHLEEATAERYRLELWTQVHDHHLRPLAGEAEDKRARELRDLIDRMGEINLNA
                     IEEYNELETRFTFLSAQKTDLEKALAQLEEAIAKINRTSKKRFREVFDLVNLKFQEVF
                     PRCFKGGHAHLALTDEENLLESGIEIIAQPPGKKNSTVEVLSGGEKAMTAVALIFAIF
                     LIKPSPFCLLDEVDAPLDEANVGRYNDLIREMTDRSQFIVITHNKRTMTIADTLYGVT
                     MEEPGISKLVSVNLSTVGKEPQKRRALTAV"
BASE COUNT          293 a          741 c          626 g          378 t
ORIGIN      
        1 cgtcgagcgg ctcgccgtca acgtcgcgca cgcgcgcatt cgcgacaacg ccggcgcccg
       61 tcccatcgac gacgagctcg tccccggcgg cgacgccgcg cgccgggtga cgttcgaccc
      121 ccgcaccgcc gccaacgccg ccatcgccgc cggctgcccg tgcgacgtct cctcgcacgc
      181 cggcaccttc tgctgtaacg ccgcgctcta ccacgcgctc gggcaggccg cggcgctccc
      241 gtcacggccg cgcgtcgcct tcgtccacgt gccgtcgcgc tttccctggg cgcgcgatcg
      301 tcgcgccgct cgcgggatct acgccattgc cgcgcacctc gctcggcttt aactagacgt
      361 caattcacgc ctatcttata ggtaccggcc ggaggttcga cgaacgtaat ggccacgatg
      421 attaccgagg agtgcatcaa ctgcggcgcg tgcgagccgg agtgccccaa cgaggcgatc
      481 tccgagggtg acgatatcta cgtgatcgat ccgaacctgt gcacggagtg cgtcggcttt
      541 catgactacg aggcgtgcca ggcggtgtgc cccgtcgagt gctgcattcc cgatccgaat
      601 aatgtggaag ccgaagagac cctctacggc cgcgccaaga agctgcatcc ggataagcag
      661 ttcccggagc tcgccgcgct gccggcgaac ctctcgcgct tccgcaagta ggtccccccg
      721 cttttcgctc gtctgaaccc gttagcccgt cgcgatcccg gtttgcggct cagaccgccg
      781 tgagcgcgcg acgcttttgc ggctctttgc cgacggtgga gagattgacc gagacgagct
      841 tggagatgcc cggctcctcc atcgtcacac cgtagagcgt atcggcaatc gtcatcgtcc
      901 gcttgttatg cgtaatgacg atgaactgcg accgatcggt catctcgcga atcaagtcgt
      961 tgtagcggcc gacgttcgcc tcgtcgagcg gcgcgtcgac ctcgtcgagc aagcagaacg
     1021 gcgacggctt gatgaggaag atggcgaaaa tgagcgccac cgcggtcatc gccttctcgc
     1081 cgcccgacag cacctcgacc gtcgagttct tcttgcccgg gggctgcgcg atgatctcga
     1141 tgccgctctc gagcaggttc tcctcgtcgg tgagcgccag gtgcgcgtgc ccgcccttga
     1201 agcagcgcgg gaacacctcc tggaacttca ggttcacgag gtcgaacacc tcgcggaagc
     1261 gcttcttcga ggtgcggttg atcttggcga tcgcctcctc gagctgcgcc agcgcttttt
     1321 cgagatccgt cttctgcgcc gaaaggaacg tgaagcgagt ctcgagctcg ttgtactcct
     1381 cgatggcgtt caagttgatc tcgcccatgc gatcgatgag gtcgcgcagc tcgcgcgcgc
     1441 gcttgtcctc ggcctcgccg gcgagcggcc gcagatgatg atcgtgcacc tgcgtccaca
     1501 gctcgagccg atagcgctcc gccgtcgcct cctcgaggtg cgtcttggcg gcgtgcagat
     1561 cgtgccgctt gacctcgagc cgcgtcactt cgccggcatg cccgtcgagc tcgccgcgaa
     1621 tccccttgag ctcgccctcg gcgtgcgaca gctgcccgcg ccgctcgtcg tgcgcggtgc
     1681 gcttgagcgc cagctcctcc gccgctcgcg cgcgctcttc ggccgagcgc aacagctcct
     1741 cgcgcgtcgt cgccactttt tcgcgcagct cggtcgcgcg cgcctcgccg acgcgaatgt
     1801 tctcctcgag ccgcacgcgg cgcgcccgct tctcgtcgcc gtccgcggtc aaccggaaca
     1861 gctgcttgtc gagcgacgac ttcttctcct gcgccgcgcc cgcctcgacc ttgaggcgcg
     1921 tgaccgcttc ctgcgccagc tcgagctcct cgtacagctt gagcgagtcg tgccccagcg
     1981 acgacagcgc atcctcgagc tgaatgagct gctcgcgcgc cgccccgagc gcggccgc
//
LOCUS       DATIML010000469         1637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4717636, whole genome shotgun sequence.
ACCESSION   DATIML010000469 DATIML010000000
VERSION     DATIML010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4717636"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..927
                     /locus_tag="VLJ38_08155"
     CDS             <1..927
                     /locus_tag="VLJ38_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU39525.1"
                     /translation="LTRDPRAREAADFPLTSVLAVPLEGDAGPLGAIAVFTAEEEEPL
                     AETDVGLLRLVAVNVSTAVRLFNASRAREVGERLTAIGRLLSQVIHDFKTPMTVISGY
                     VQLMADADDRGTRQEFSELILRQFDVLSAMQREVLEFARGETRIFVRRVYLKKFFADL
                     ERQLRLEIGTQPVELLVQVDSKLVARFDEGRVARALHNLARNALEAMGDRGGRLTLGA
                     KFEGSELVIAVSDTGPGIPKEIEGRLFQSFVTAGKRGGTGLGLAIVKKIVDEHGGRIA
                     VRSSNAGTTVELTFPQQREKDAPAPDASREQS"
     gene            924..>1637
                     /locus_tag="VLJ38_08160"
     CDS             924..>1637
                     /locus_tag="VLJ38_08160"
                     /inference="COORDINATES: protein motif:HMM:NF024581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HSU39526.1"
                     /translation="MTGRRLTVLDERRAALEMCGYCPKLCRSTCPVSDAEASEALFPW
                     GKMSMTWYVARGDLTPDADVARLAWGCTGCDACRERCEHQNPVAATLTAARAVFREQG
                     FAPSGSERAVARFAARRARLAERARALGRDTAASRVALLVGCGYLAGRGHEASDIVNA
                     ARALFGAVHVLDGCCGLPLKEGGHRALAAELRGALVSSLAGRRLLVADAGCAAELRDV
                     GAETLVEAAARSASKLGRVK"
BASE COUNT          233 a          570 c          584 g          250 t
ORIGIN      
        1 ctgacgcgcg atccccgagc gcgcgaagca gcggatttcc cgctgacctc ggtgctcgcc
       61 gtgccgctcg agggggacgc cgggccgctc ggcgccatcg cggtcttcac ggccgaggaa
      121 gaggagccgc tcgccgaaac cgacgtcggc ttgttgcggc tcgtcgcggt caacgtctcg
      181 acggcggtgc gcctgttcaa cgcgagccgc gcgcgcgaag tgggcgagcg cctgactgcg
      241 atcggccggc tcctctcgca ggtcatccac gacttcaaga caccgatgac ggtcatcagc
      301 ggctacgttc agctcatggc cgacgccgac gaccgtggga cgcggcaaga gttctccgag
      361 ctcatcttgc gccagttcga cgtcctttcg gccatgcagc gcgaggtgct cgagttcgcg
      421 cgtggtgaga cgaggatctt cgtgcgccgc gtgtacttga agaagttctt cgccgacctc
      481 gagcgccagc tgcggctcga gatcggcacg cagccggtcg agctgctcgt ccaggtcgac
      541 tcgaagctcg tcgcgcgctt cgacgagggc cgcgtggcgc gtgccctgca caacttggcg
      601 cgcaacgcgc tcgaggccat gggcgaccgc gggggccggc tcacgctcgg cgcgaagttc
      661 gagggcagcg agctcgtgat cgccgtgagc gacaccgggc ctggcatccc caaagaaatc
      721 gaaggccggc tctttcaatc cttcgtcacg gcgggcaagc gggggggcac gggcttggga
      781 ctcgccatcg tcaaaaagat cgtcgacgag cacggcggac gcatcgccgt tcgttcgtcg
      841 aacgcgggca cgacggtcga actgacgttc ccgcagcagc gcgaaaaaga cgctcccgcg
      901 ccggacgcct cgcgcgagca atcatgaccg ggcgccgcct gacggtgctc gacgagcgtc
      961 gcgccgcgct cgagatgtgc ggctactgcc cgaagctctg ccgcagcacg tgtccggtct
     1021 cggatgccga ggcgagcgag gctttgtttc cctggggcaa gatgtcgatg acctggtacg
     1081 tcgcgcgcgg cgatctgacg ccggacgcgg acgtggcccg gctcgcgtgg gggtgcacgg
     1141 gttgcgacgc ctgccgcgag cgctgcgaac accaaaatcc cgtggccgcg acgctcacgg
     1201 ccgcgcgcgc cgtatttcgc gagcaaggct tcgcgccgtc cggctccgag cgcgccgtcg
     1261 ctcgctttgc agctcgccgc gcgcggctcg ccgaacgcgc ccgggccctc ggccgcgaca
     1321 ccgcggcgtc gcgcgtcgcg ctcctcgtcg gctgcggcta cctcgccgga cgcggccacg
     1381 aagccagcga catcgtcaac gccgcgcgcg cgctcttcgg cgccgtgcac gtgctcgacg
     1441 gttgttgcgg cttgccgctc aaagaagggg ggcatcgcgc tcttgccgcg gagctccgcg
     1501 gagcgctcgt gagctcgctc gcagggcgac gcttgctcgt cgcggacgcc gggtgcgcgg
     1561 ccgagttgcg cgatgtcggc gccgagaccc tggtcgaagc ggctgcgcgg agcgcttcga
     1621 agctcggccg cgtgaag
//
LOCUS       DATIML010000470         3360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2692680, whole genome shotgun sequence.
ACCESSION   DATIML010000470 DATIML010000000
VERSION     DATIML010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3360
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2692680"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            352..951
                     /locus_tag="VLJ38_08165"
     CDS             352..951
                     /locus_tag="VLJ38_08165"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HSU39527.1"
                     /translation="MLRWGRVAVAYLAASASAVAVALLWRGSSPFSCSEPWLVLPTAL
                     AHVYSLVIGLALGALVAFSTRIFVTRYAWARNLHRELRPVARDLSVAGILALAAFSAL
                     GEELWFRGILQPWLGLWLQAAAFGIVHAQLRGPSRWAWISWATIMGLAFGATFQLTGS
                     LVGPIVAHALINCLNLSYLKSHDPEPRRRPLGGLLSQRS"
     gene            1096..2595
                     /locus_tag="VLJ38_08170"
     CDS             1096..2595
                     /locus_tag="VLJ38_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSU39528.1"
                     /translation="MAESDSSYPEERPRVLVVDDEKFIRDIIADFLGMEGYIVRTAED
                     GVSATNELERARYDMVISDLKMPKMGGLDLLKEVARTHPDTLTVIMTGFGTVETAIDA
                     MKRGAYDYILKPFKVEEVVHIVQRGLEKRRLTAENLRLREALSLYKVSEAIAASLSLD
                     EVIATLTDGALNEVRADTVATWLDDGEGGYFQRSIVASPSLPQGEELGMLDRVAVVER
                     LKSGAPVVEHGARARELFAEHPGRQVSSLAVVPLKMRDRLMGWIAVISLTASRRFDEG
                     QRKLLSIIASRAAAAIENARLYEDLQATFQQTIQSLARTIDKMDHYTAGHSERVAKYA
                     VALARWIGLPEAEIEIVRHSALMHDIGKIGCVMNLNKPGKLTLDEYDVFKRHPVYGRE
                     ILDPVRFLAPVVPGVYLHHERWDGRGYPLGLAKGDIPLIARIISVADTYDAMTSDRSY
                     RRALPHDVTVSEIERCSGTQFDPDLTGTFVERIEEQREQARDSGEPIPD"
     gene            2635..>3360
                     /gene="lipB"
                     /locus_tag="VLJ38_08175"
     CDS             2635..>3360
                     /gene="lipB"
                     /locus_tag="VLJ38_08175"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF010925.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HSU39529.1"
                     /translation="MTATRTLRGFWLGRRPYAAVVALQERLFAQRLAGQSEDSVLLLE
                     HEPVVTQGRGAKAEHLLAPRELLAERGIELHTSNRGGDVTLHAPGQLVAYPILDLNPD
                     RRDVRRYVRALSETMRRLAAELGVAAGLHPEHVGLWADRQRPERYTTSDEAAEPAKIG
                     AIGVRISRWVTMHGFALNLVNDLTLYDIIVPCGIRELGVASIASLGGRAVTPAALAPR
                     ALATLADVLEARATELSDASALRD"
BASE COUNT          576 a         1163 c         1078 g          543 t
ORIGIN      
        1 acgccacgcg aatcgtcgaa acggcgcgcc gcgtcccaca gcccctcgcg cccgaagctg
       61 agcagctctt cgaggtcgcc cgctccgccg agcgtgcgca ggatttggcg cgcaacgatg
      121 tccaccaacc caagggctga cgaaaatcgc tcaagtacct ctggcgactc gttgcggtct
      181 cccacgcggt cgcgactcta acaaactccg gcgcgacgca gcatagcttt cggcaagggc
      241 ggtgcggcgc gccgcgtttg cacgttaccg ggtcgtttcg cccctcgcga gcgagcggcg
      301 gaaatcgctc ggtgcgatgc cagcggggtc gtggcatatt ccgagcaagc aatgcttcgc
      361 tggggcagag tcgccgtcgc ctatctcgcc gccagcgcga gcgcggtcgc ggttgcgctg
      421 ctgtggcgcg ggagttcgcc gttcagctgc agcgaaccct ggctggttct gccgactgcg
      481 ctcgcgcacg tgtacagctt ggtgatcggc ctcgcactcg gcgcgctggt cgcgttcagt
      541 acgcgcattt tcgtgacccg ctacgcttgg gccaggaatc tgcaccgcga gctgcgccca
      601 gtcgcacgtg atctcagcgt tgccggcatc cttgccctgg ctgcgttcag cgcgctcggc
      661 gaggagcttt ggttccgtgg tattttgcaa ccctggctcg gtttgtggct gcaagccgcg
      721 gcctttggca tcgtgcacgc gcaactccga ggcccgagtc gctgggcctg gatcagctgg
      781 gcaaccatca tgggcctggc cttcggggcg accttccagc tcaccggctc gctcgtcggt
      841 ccaatcgtgg cccacgcgct gatcaattgc ctgaacttgt cttacctgaa gagccacgac
      901 ccggagcccc ggcggcgtcc gctgggcggc ctgctcagcc agcgaagcta aggacccgaa
      961 acggaaaaaa ctgccggcag ctgattttac ggccatttcg agcgcgcagc ccggtcccga
     1021 tcacgggccg tgcaaggtgc acgaatgaag gggtactctg ccattctgag ctccaccgaa
     1081 aagaacccat ccaggatggc cgagtcagac tcgagttacc ccgaagaacg cccgcgggtt
     1141 ctcgtcgtcg atgacgagaa attcatccgc gacatcatcg ccgacttcct cgggatggaa
     1201 ggctatatcg tgcgtaccgc cgaagacggc gtgagcgcaa cgaacgagct cgagcgcgcg
     1261 cgctacgaca tggtcatcag cgacctcaag atgcccaaga tgggcggtct ggatctgctg
     1321 aaagaggtcg cgcgcacaca ccccgacacg ctgaccgtga tcatgaccgg ctttggtacg
     1381 gtcgagaccg cgatcgacgc catgaagcgc ggcgcctacg actacatctt gaagccgttc
     1441 aaggtggagg aggtcgtgca catcgtgcag cgcgggctcg agaagcgccg actgactgcc
     1501 gaaaatttac gcctgcgtga agcgctctcg ctctacaagg tgagcgaagc catcgccgcg
     1561 agcctctcgc tcgacgaagt gatcgccacg ctgacggacg gcgccttgaa cgaggtccgc
     1621 gccgacacgg tcgccacttg gctcgacgac ggcgagggcg gctactttca gcgcagcatc
     1681 gtggcctcgc ccagcctgcc gcagggcgag gagctcggca tgctcgatcg cgtcgcggtc
     1741 gtcgagcgac tgaagagcgg cgccccggtc gtcgagcacg gcgcgcgcgc tcgggagctc
     1801 ttcgccgaac atccgggccg ccaagtctcg agcctcgcgg tcgtaccgct caagatgcgc
     1861 gatcgactga tgggctggat cgcggtgatt tcgctgacgg cgagccggcg cttcgacgaa
     1921 ggtcagcgca agctcttgag catcatcgcg tcgcgcgccg ccgcggcgat cgagaatgcc
     1981 cgcttgtacg aagacctgca ggcgacgttc cagcaaacga tccagagcct cgcccgcacc
     2041 atcgacaaga tggatcatta cacggcgggt cactccgaac gcgtcgcgaa atatgccgtc
     2101 gcgctcgcgc gctggatcgg cctgcccgaa gccgagatcg aaatcgtgcg ccactcggcg
     2161 ctgatgcacg acatcggcaa gatcggctgc gtcatgaacc tgaacaagcc gggcaagctc
     2221 acgctcgacg agtacgacgt gttcaagcgc catccggtgt acggccgtga gatcctcgat
     2281 ccggtgcgct tcctcgcgcc cgtcgtgcca ggcgtgtacc tgcatcacga gcgctgggac
     2341 ggccgcggtt atccactcgg cctcgccaag ggcgacatcc cgctcattgc gcgcatcatt
     2401 tcggtcgccg acacctacga cgcgatgacg agcgatcgct cgtaccgccg cgcgttgccg
     2461 cacgacgtga ccgtgagcga aatcgagcgc tgttcgggca cgcaattcga ccccgatctg
     2521 acgggcacct tcgtcgagcg catcgaagag cagcgcgagc aggcgcgcga ttcgggcgag
     2581 ccgatccccg actgatgcgg cgcccgcgcg ctgcgctatg aagtcggtat cctcgtgact
     2641 gctacgcgca ccctgcgcgg cttctggctc ggccggaggc cgtacgccgc cgtcgtcgcc
     2701 ctccaggagc ggctgttcgc ccaacgcctc gccggccaaa gcgaagacag cgtgctcctg
     2761 ctcgagcatg agccggtcgt cacgcaaggt cgcggtgcca aggccgagca cctgctcgcg
     2821 ccacgcgagc tgctcgcgga gcgcggcatc gagctccaca cgagcaaccg cggcggcgac
     2881 gtgacgctgc acgcgccggg gcagctcgtc gcgtatccga tcctcgactt gaacccggac
     2941 cggcgcgacg tgcgccgcta cgtccgcgcg ctcagcgaaa ccatgcggcg gctcgccgcc
     3001 gagctcggcg tcgccgccgg cctgcacccc gagcacgtcg gtctctgggc ggatcggcaa
     3061 cgtcccgaac gctacacgac gagcgacgaa gcggccgaac ccgcgaaaat cggcgccatc
     3121 ggcgtgcgta tctcgcgctg ggtcacgatg cacggcttcg ccctgaacct cgtgaacgat
     3181 ctgacgctct acgacatcat cgtaccgtgc ggcattcgcg agctcggcgt cgccagcatc
     3241 gcgtcgctcg gcggccgcgc cgtcacgccc gcggcgctcg caccgcgcgc gctcgcaacg
     3301 ctcgccgacg tgctcgaagc gcgcgcgacc gagctaagcg acgcgagcgc actccgcgat
//
LOCUS       DATIML010000471        10994 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1539240, whole genome shotgun sequence.
ACCESSION   DATIML010000471 DATIML010000000
VERSION     DATIML010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10994
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539240"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..743)
                     /locus_tag="VLJ38_08180"
     CDS             complement(<1..743)
                     /locus_tag="VLJ38_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39530.1"
                     /translation="MPASEPHPPTKSAESAWNRGGLTLTLFALAALVASTVGRSISPA
                     MFGAATGLAAWIDRTQHVASLLSQLVAAGGVAFVLRAVATTFTQHSLGIGYRMLVIPA
                     GTAASVFTMAATGRALEPEYGCSLTIAALTAAAASAAVAMLSPATRALGLALAISALA
                     GAFDLGGIRLAQTALENASASAYKLASVLVTVGFVLEVALVILAFGWLSQRRGGRALL
                     LTFLTFVLVTIWGVALRGAAQSGASAWQIV"
     gene            complement(775..2559)
                     /locus_tag="VLJ38_08185"
     CDS             complement(775..2559)
                     /locus_tag="VLJ38_08185"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HSU39531.1"
                     /translation="MTRDAQIPLFLWVATAVVVHALWGGGADRAAKVIEEKIEIREFA
                     ASVRRFVRGENKPLEVALLDDTSEPKPPEPTPVPETDKSEPERTEEKNADKDEAKPEK
                     PKTPLPEPKKEPEKKPEPKKPEAEKKPEEEKKPVPATPAPEPESAPEKRVAVQQHVQP
                     NQQDNPNARFIANDANHVDEETHARITSNDQDDPKPTPGGAAQSSKDPNDPGDADETK
                     ILQSDEHKGARDRAPAEHQAAPQPKVAEQPAHSAPSTAPAQARIEGAQGGSQKSTSAS
                     KLPAEAGQAPRPAMHAADEVPETIDSTHGAWEIAGQRAGAVEQPGRQARKRRELPPMR
                     VSGLGGLLGLGATGTTPGGMNLNLTPQVAVAAIGEDTLKRERVADGERRRSQHAGHWR
                     PVGIERWRSAIENYVPSVKPGNQTALNTAAVPFASYLAQIHNRIHPIFADTFLASLDQ
                     LPASDPMNRPEIFTSLEIVVGHDDGRIQRMGVTRTSGVTAFDVAALEAVNRAQPFGTP
                     PREIVSPDGNVYLHWEFHRGVEACGTANAHPFMLKLAPKTAPPPSEPATPPENKEEER
                     HGQAEPRKSPKDGADPSRRPLAYAKTAE"
     gene            complement(2596..3441)
                     /locus_tag="VLJ38_08190"
     CDS             complement(2596..3441)
                     /locus_tag="VLJ38_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU39532.1"
                     /translation="MGLLDGKSAVVTGAGHGIGRATALLFAREGARVVVNDLGAARTG
                     EGGEHSAADAVVAEIRAAGGSALASYDSVATPAGATAIIEAAVSAHGSIDILVNNAGI
                     LRDKTLLKLELADWQAVLDVHLTGSFLCTQAAAVHMKAQQSGRIVNTTSVSGLLGNFG
                     QSNYAAAKAGIYGLTRTASIELQRYGITVNAVAPIAKTRMTDDLPMFAKIADTLSPEH
                     VAPAHLFLASELCGERTGIVLAVAGARMSVYKVVESAGRFKETDGGVWTAEEIERHFD
                     AIAKG"
     gene            3525..5603
                     /gene="metG"
                     /locus_tag="VLJ38_08195"
     CDS             3525..5603
                     /gene="metG"
                     /locus_tag="VLJ38_08195"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HSU39533.1"
                     /translation="MSRRFLVTSALPYANGAIHLGHMLEHVQTDVWVRFQRLRGNEVL
                     YVCADDTHGTATMMRARQEGRSEETLIAEMNLAHQKDFAGFDVRFDHYGSTHSPKNRA
                     LCAEVWAALRAQGRVVEREVSRLFDPEAKVFLADRFVKGTCPRCGTPGQYGDNCESCG
                     STYAASELKDPVSTLSGARPELRSSPQYFVQIEHFHEFLTQWTQAGGHLQTEVGNYVK
                     GHFLGEPLRDWDVSRPAPYFGFEIPDAPGHYWYVWFDAPIGYMAATAEWCERTGAAFD
                     RYWRSNDTEIVHFIGKDIIYFHTLFWPAMLKASGFSLPSRVHVHGFLTVDGEKMSKSR
                     GTFVLASTYLEHLDPAYLRYYLASKLGPGIEDLDLNLEEFTARVNADLVGKVVNLASR
                     SARFVEATGLSERYPDDGGLFEQAAAAGDEIAKAYEACDYARAMRSIMQLADRANEFV
                     DRKEPWKLAKAPERAGELQGACTVILNLYRQLAIYLAPVLPRLATASAELLAAPLLAW
                     DETKRPAVGSKIGKFQHLVARVDPKKVAALVASQPSAGATSPVAVATSASTGELAAKL
                     ASTAADDEAALVAEPLAAECSIDDFGKIDLRVARVVAAESVPEAKKLIKLTVSLGGEH
                     RRTVFAGIKSAYAPETLVGRLVVVVANLAPRKMKFGVSEGMVIAAGPGDKDIFVLSPD
                     AGAKPGQRVH"
     gene            5901..6095
                     /locus_tag="VLJ38_08200"
     CDS             5901..6095
                     /locus_tag="VLJ38_08200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39534.1"
                     /translation="MSTRENVNTIPESELPGLNSQSQAHTTRYPSSYGTTVPGGIPSY
                     GPGIESDEPMPIAEIVVACR"
     gene            complement(6126..7448)
                     /locus_tag="VLJ38_08205"
     CDS             complement(6126..7448)
                     /locus_tag="VLJ38_08205"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF004490.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006206 - pyrimidine nucleobase metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HSU39535.1"
                     /translation="MRARALENPVELIVKKRDGQRLSEAEIDGLVAGYLAGRVADYQM
                     SAWLMAALLRGLDERETTALTRAMLRSGKVLGLKSVAAPKIDKHSTGGVGDKISLCLA
                     PLVAACGVVAPMIAGRGLGHTGGTLDKLEAIPGYRVELDARQFERVLREVGASIIGQS
                     SDIAPADRRLYALRDVTGTVESVPLIVASILSKKLATGSDALVLDVKAGRGAFMQDRE
                     RARELARALVRTARRAGLATVALITDMSAPIGRSIGNALETREAIEVLQNRGPYDTRE
                     LTLVLGEEMLVLARRTSSRRAARALLERALGDGSALERFARMVRAHGGDARVAEQPER
                     LPRARVRVPLLAKRDGLLTHVDAWELGWVSVALGAGRTRAEQAVDPGAGIELCRAPGE
                     RVARREPLAFLCAAKRSLIDAQLERATAAFHVGGRLTPRELVLERVTR"
     gene            7663..8724
                     /locus_tag="VLJ38_08210"
     CDS             7663..8724
                     /locus_tag="VLJ38_08210"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing transcriptional regulator"
                     /protein_id="HSU39536.1"
                     /translation="MERRQRGRPAGKFTQHRRVDRLREILGRHPKGLSLYELADALGV
                     TVRTMRRYMVEIEREFELDSAPVKAGGQLLWRIRSGEIPRKLELRRTQAYALLAARRV
                     FEPMRGSTLFEEIDLAINKLLAFAQRPGRGPNAGLADAQLEQRFLYLPHAPKNYAQKT
                     EELDDLFQSVSDLRPLSLLYRSATRADEERITIHPYALVLHRDSIYCVGYHVGRQEIR
                     TFVLDRMRDTQCAVSERFELPADFLVDQYFQGEFGIWRDATPHKVVVEFDAYAADYVR
                     MRTVHASQKLQSIAGGGLRLTMTVGNLLPVVSWVLEWGGRARVIEPPELIARVKTELE
                     AALEHYRDDKKAAPKRAPR"
     gene            complement(8726..9349)
                     /locus_tag="VLJ38_08215"
     CDS             complement(8726..9349)
                     /locus_tag="VLJ38_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HSU39537.1"
                     /translation="MPASPLAWTRKRWALLAAVPAAALTFAAPSQADIYKTVGADGVI
                     SFTNSPSKSGKLVIRTETSRPPVHMPSDSSPARYGRYDEHIRQAAALYQIPEDLVRAV
                     IQVESDFDPRAVSPANARGLMQLMPETAERMLVTDIFDPRQNIFGGVRYLRVLANLFN
                     GDIELTIAGYNAGEGAVMRYGGIPPFPETQEYVKRVLAQYRANRSAH"
     gene            complement(9475..>10994)
                     /gene="speA"
                     /locus_tag="VLJ38_08220"
     CDS             complement(9475..>10994)
                     /gene="speA"
                     /locus_tag="VLJ38_08220"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HSU39538.1"
                     /translation="KPELLITLAAMQEVGGLIICNGYKDSSYIETALLAQKFDKTVMV
                     VLERIEELDVVFRASEKVGIRPMLGVRAKLTTRGVGRWADSAGDRAKFGLTTSEMVEV
                     VDRLAERGMLDCLQLLHFHIGSQISSIIPIKNAMQEASNIYVELAKLGCKMGYIDVGG
                     GLAVDYDGSKTDFHASKNYQLEEYAADVVSHIQAACNKADLPVPTIVSESGRAIAAHH
                     SVLVLEVVGRSHVQFGEPVEPRPDAHRLLKELFETHSGIQPKNVQESYHDASQAKEEA
                     QSLFKYGYLSLRERAQVERLFWNCCEKIHQTLKRLKFVPEELQHLDKNLSAIYYCNFS
                     LFQSAPDIWAIDHLFPIMPIHRLDEEPTVSATLADLTCDSDGMIDHFIDVEDVKSTLA
                     VHTLKDNESYFLGMFLNGAYQEILGDLHNLFGDTNAVHVELTDTGYQIGHVIKGDSVS
                     EVLRYVEYVPENMIEAVRRQAERAVSQGRITNEQMRTLMHHYEESLRSYTYLTDD"
BASE COUNT         1693 a         3650 c         3721 g         1930 t
ORIGIN      
        1 acgatctgcc acgccgatgc cccgctctgc gcggcgcccc gcagcgccac gccccaaatc
       61 gtcacgagca cgaaggtcaa aaacgtgagc aagagcgcgc gaccgccgcg ccgctgcgaa
      121 agccagccga acgcgaggat cacgagcgcc acctcgagca cgaagcccac cgtcacgagc
      181 acggatgcca atttgtaggc gctcgccgaa gcgttctcga gcgcggtctg cgccagccga
      241 atgccgccga gatcgaaggc gccggcgaga gcggaaatgg cgagcgctag tccgagcgcg
      301 cgcgtcgcgg gcgagagcat ggcgacggct gcgctcgcag ccgcggccgt gagcgcggcg
      361 atcgtgagcg agcaaccgta ctcgggctcg agcgcacgtc ccgtggcggc catggtgaac
      421 acgctcgccg cagtccccgc cggaatcacg agcatgcggt agccgatgcc gagggagtgc
      481 tgcgtgaacg tggtcgcgac ggcgcgcagg acgaaagcga cgccgcccgc cgcgacgagc
      541 tgactcaaga ggctcgcgac gtgctgcgtg cgatcgatcc aggcggcgag acccgtcgca
      601 gcgccgaaca tcgccggaga gatcgagcgc cccacggtgc tggcgacgag cgcggccagg
      661 gcgaacagcg tgagcgtcaa gccgccgcga ttccacgccg actcggcgct cttcgtaggc
      721 gggtggggct cgctcgcggg cattgggagg agagtacgtt actccgcggg cttgtcactc
      781 cgcggtcttg gcataagcga gcggccttcg ggacggatca gcgccgtctt tgggggattt
      841 acggggctcg gcctgcccgt gtcgctcctc ctccttgttt tcgggtggag tcgcgggctc
      901 gctcgggggc ggcgcggtct tcggtgccag cttgagcatg aaaggatgcg cgttcgccgt
      961 cccgcaggct tcgacaccgc ggtgaaattc ccagtgcagg tacacgttgc cgtcgggtga
     1021 cacgatttcc cgcggcgggg tgccgaaggg ctgcgcgcgg ttcacggcct ccagcgccgc
     1081 cacgtcgaag gccgtgactc cgctcgtccg cgtcacgccc atgcgctgga tgcgcccgtc
     1141 gtcgtgaccc acgacgatct cgagcgaggt gaagatctcc gggcggttca tgggatcgga
     1201 cgccggtaac tgatcgagcg acgcgaggaa cgtgtcggcg aagatcggat gaatgcgatt
     1261 gtggatttga gcgaggtagc tcgcgaaggg taccgccgcc gtgttgagcg ccgtctggtt
     1321 gcccggcttc acggagggca cgtagttttc gatcgccgag cgccagcgct cgataccgac
     1381 ggggcgccag tgtcccgcgt gctggctcct gcgccgctcg ccgtccgcga cgcgctcgcg
     1441 cttgagtgtg tcttccccga tggccgcgac ggcgacttgc ggcgtgaggt tcaggttcat
     1501 gccgccgggc gtcgtgccgg tcgcgccgag gccgagcaac ccgccgagcc cggagacgcg
     1561 catcggtggc agctcgcgcc gtttgcgtgc ttgccggccg ggttgctcga cggcgcccgc
     1621 gcgttggccg gcgatctccc aggcgccgtg cgtcgaatcg atcgtctcgg gtacctcgtc
     1681 ggcggcgtgc atggctgggc gcggcgcttg tccggcttcc gcgggcagct tcgaggcgct
     1741 cgtcgatttt tgcgagccgc cctgcgcgcc ttcgatgcgg gcctgcgcag gtgcggtgga
     1801 aggcgcggag tgcgcgggct gctcggcgac cttgggctgc ggagcggcct gatgctcggc
     1861 gggagcgcga tcgcgggcgc ctttgtgctc gtcgctctgt aagatcttgg tctcgtccgc
     1921 gtcgcccgga tcgttcggat ccttgctgct ttgtgcggcg ccgcccggag tcggcttcgg
     1981 atcgtcttga tcgttcgagg tgatgcgcgc gtgcgtctcc tcgtcgacgt gattggcgtc
     2041 gttggcgatg aagcgagcgt tgggattgtc ttgttgattc ggctgcacgt gctgctggac
     2101 ggccacgcgc ttttccggtg cggactccgg ctcgggtgct ggcgttgccg ggaccggctt
     2161 cttctcttcc tccggcttct tctctgcctc cggctttttc ggctcgggct tcttctccgg
     2221 ctcctttttc ggttcgggca gcggagtctt cggcttttcc ggcttggctt cgtccttgtc
     2281 ggcgttcttt tcttcggtcc gttcgggttc gcttttgtcc gtctcgggca cgggagtcgg
     2341 ctccggcggc ttcggctcgc tcgtgtcgtc gagcagcgcc acctcgagcg gcttgttctc
     2401 accacgcacg aagcgccgca ccgaagcggc aaactcgcgg atctcgatct tctcctcgat
     2461 caccttcgcg gcgcggtccg cacctccgcc ccagagcgcg tgcaccacga cggcggtcgc
     2521 gacccagagg aatagaggta tctgcgcgtc ccgagtcatc ctgcgagccg gccgaccggc
     2581 ggcctccgga gagtatcacc ccttcgcgat cgcgtcgaag tgccgctcta tctcctcggc
     2641 ggtccaaacg ccgccgtccg tttccttgaa tcgccccgcg ctctcgacca ccttgtagac
     2701 gctcatacgc gctccagcca ccgccagcac gatgcccgtc ctttcgccgc aaagctcgct
     2761 cgccagaaac aaatgggccg gggccacgtg ctcgggcgac aacgtgtcgg cgattttcgc
     2821 gaacatcggt agatcatcgg tcatgcgcgt tttggcgatg ggcgcgacgg cgttcaccgt
     2881 gatgccgtag cgctgcagct cgatcgaggc ggtgcgcgtg aggccgtaga tgccggcctt
     2941 ggccgccgcg taattcgact ggccgaagtt gccgagcaac cccgagacgc tcgtcgtgtt
     3001 gacgatgcgg ccactctgtt gcgctttcat gtgcacggcg gcagcttgcg tgcagaggaa
     3061 cgagccggtg aggtgcacgt cgagcacggc ttgccagtcg gcgagctcga gcttgagcag
     3121 tgtcttgtca cgcaagatgc cggcgttgtt gacgaggatg tcgatgctgc cgtgcgcgct
     3181 caccgcggct tcgatgatgg ccgtggcgcc tgccggcgtc gcgacgctgt cgtagctcgc
     3241 gagcgcggag ccgcccgccg cgcggatctc ggcgacgacg gcgtcggcgg cagagtgctc
     3301 tccgccttcg cccgtgcggg ccgcgcccaa gtcattgacg acgacgcgcg caccttcgcg
     3361 cgcaaagagg agcgccgtcg cgcgtccgat cccgtgcccg gcgcccgtga cgaccgccga
     3421 ttttccatcc aggagtccca tgctcgaggg actcgtacgc cgtggcccgt cccgtgtcga
     3481 ggcttggcct ccacctcggc gaacgatggt aggctccgcg ccccatgagc cgccgctttc
     3541 tcgtcacgag cgcgctgccg tatgcgaacg gcgcgatcca cctcgggcac atgctcgagc
     3601 acgtgcagac cgacgtttgg gtacgtttcc agcgcctgcg gggcaatgaa gttctttacg
     3661 tctgcgccga cgacacgcac ggcacggcca cgatgatgcg cgcgcgccaa gaagggcgaa
     3721 gcgaggaaac cctcatcgcc gagatgaacc tcgcccacca aaaggatttt gcgggcttcg
     3781 acgtgcgctt cgatcactac ggcagcacgc actcgcccaa aaatcgcgcg ctttgcgccg
     3841 aagtttgggc ggctttgcgc gcccaggggc gcgtggtcga gcgcgaggtc tcgcgcctgt
     3901 tcgatccgga agcgaaggtg tttctcgccg accgcttcgt caaaggtacc tgcccgcgct
     3961 gcggcacccc gggccagtac ggcgacaact gcgagtcctg cggcagcacc tacgccgcga
     4021 gcgagctcaa agatccggtg agcacgctat cgggcgcgcg gccagagctc cggagctcac
     4081 cgcagtattt cgtgcagatc gaacactttc acgagtttct gacgcagtgg acgcaagcgg
     4141 gcggtcactt gcaaaccgag gtcggaaatt acgtgaaggg gcacttcctc ggcgagccgc
     4201 tgcgcgactg ggacgtctcg cgtcccgccc cgtacttcgg tttcgagatc cccgacgctc
     4261 ccggtcacta ctggtacgtc tggttcgacg cgcccatcgg ctacatggcg gcgaccgccg
     4321 agtggtgcga acggacgggc gccgcgttcg accgctactg gcgctcgaac gacaccgaaa
     4381 tcgtccactt catcggcaag gacatcatct acttccacac gctgttttgg cccgcgatgc
     4441 tcaaggcgtc gggcttctcg ctgccctcgc gcgtccacgt ccacgggttt ctgaccgtcg
     4501 acggtgagaa gatgtcgaaa tcgcgtggca cgttcgtgct cgcgagcacg tatctcgagc
     4561 acctcgatcc ggcgtacttg cgctactacc tcgcgagcaa gctcggcccc gggatcgagg
     4621 atctcgactt gaacctcgag gagttcacgg cgcgcgtgaa cgcggacttg gtcggcaagg
     4681 tcgtgaacct cgcgagccgg agcgcgcgct tcgtcgaggc gacgggtctc tccgagcgct
     4741 accccgacga cggcgggctc ttcgagcaag cggcggcggc aggtgacgag atcgccaaag
     4801 cttacgaagc gtgcgactac gcgcgcgcca tgcgcagcat catgcagctt gccgatcgcg
     4861 cgaatgagtt cgtcgatcgc aaggagccgt ggaagcttgc caaggcgccc gagcgcgcgg
     4921 gtgagctcca gggcgcctgc acggtcatcc tgaacctcta tcggcagctc gcgatctatc
     4981 tcgcgccggt gttgccgcgg ctcgcgacgg cgagcgccga gctcttggca gcgccgctcc
     5041 tcgcctggga cgaaacgaag cggcccgccg tcggcagcaa aatcggcaaa tttcagcacc
     5101 tggtcgcgcg cgtcgatccg aagaaggtgg cggcgctcgt ggcgtcccag ccgagcgctg
     5161 gcgcgacgtc gcccgttgcg gtcgcgacga gcgcgagcac tggagagctc gccgccaagc
     5221 tggcgagcac ggcggccgac gacgaggcgg cactcgtggc cgagccgctc gccgcagaat
     5281 gctcgatcga cgacttcggc aagatcgatc tgcgcgtggc gcgcgtcgtc gcggcggagt
     5341 cggtgccgga agcgaagaag ctcatcaagc tgaccgtgag tctcggaggc gagcaccgcc
     5401 gcacggtctt cgccggcatc aagagcgcgt acgcacccga gacactcgtc gggcgcttgg
     5461 tggtcgtggt cgccaatctc gcgccgcgca aaatgaagtt cggtgtaagt gaaggtatgg
     5521 tgatcgcagc ggggcccggg gataaggaca tcttcgtctt gagccccgat gcgggagcga
     5581 aaccgggcca acgcgtccac tgagcgcggc cgaacgaagg gcgtcaaagt gtgcttggac
     5641 ggaggtggat atccgttcaa gtagccgtgc gcggccggcg tggtaaactc agtcctgtgc
     5701 aggcagctcg cgcgcctcgg ttcgtcatcc atttcctcct tggcggagcc ctgtcgttcg
     5761 ggagcgcgtg cgcgccgacc attgcgacga aaacggtcgt ctcgtcgcag ggtgtcctgc
     5821 cgtcctacaa aatagagtgc gcccacctcg atgcgtgctt ggcggaggcg aagcgggctt
     5881 gtcacggcaa gtttcagacc gtgagcaccc gagaaaacgt gaacacgatt cccgagagcg
     5941 agcttcccgg cttgaactcg cagtcgcagg cgcataccac gcgttacccg agcagttacg
     6001 ggacgaccgt ccccggaggc atcccttcgt acggacccgg catcgagtcc gacgagccga
     6061 tgcccatcgc cgagatcgtc gtcgcctgtc gttgaggttg gcgtcgctcg cgtcagccgg
     6121 tcgcttcagc gcgtcacgcg ttcgagcacc agctcgcgcg gtgtgagtcg cccgccgacg
     6181 tgaaaggccg ccgtcgcgcg ctcgagttgc gcgtcgatga gcgaacgctt ggccgcgcac
     6241 agaaacgcca gcggctcacg ccgcgcgacg cgttcgccag gggcacggca gagctcgatg
     6301 ccggcgcccg gatcgacggc ttgctccgcg cgggtgcgcc cggccccgag cgcgacggac
     6361 acccagccga gctcccaggc gtccacgtgc gtgagcagtc cgtctcgttt cgccaagagc
     6421 ggcacgcgca cgcgcgcgcg cggcagccgc tcgggctgct cggcgacgcg cgcgtccccg
     6481 ccgtgcgctc gcaccatgcg cgcgaagcgc tcgagcgccg agccgtcgcc gagggcgcgt
     6541 tcgagcagag cgcgcgccgc ccggcgtgag ctcgtgcgcc gtgcgagcac gagcatctct
     6601 tcgccgagca cgagcgtgag ctcgcgcgtg tcgtagggtc cccggttttg caagacctcg
     6661 atggcttcgc gggtctcgag cgcgttaccg atgctgcggc cgatgggcgc gctcatgtcc
     6721 gtgatgagcg ccaccgtcgc gagtcctgcg cggcgcgccg tgcgcacgag ggcgcgagcg
     6781 agctcgcgcg ctctctcgcg atcctgcatg aaagcgccgc gccccgcctt cacgtcgagc
     6841 acgagggcgt cgctgccagt ggcgagcttc ttcgagagga tgctcgcgac gatgagcggc
     6901 accgactcga ccgtgccggt cacgtcgcgc agcgcgtaaa ggcgccgatc ggcgggcgcg
     6961 atgtcgctcg actgtccgat gatcgacgcg ccgacctcgc ggagcacgcg ctcgaactgg
     7021 cgcgcgtcga gctcgacacg atagcccggg atcgcttcga gcttgtcgag cgtgcctccg
     7081 gtgtgtccga gcccgcgccc ggcgatcatc ggtgcgacga cgccgcacgc ggcgacgagc
     7141 ggcgcgaggc agagactgat cttgtcgccc acgccgcccg tcgaatgctt gtcgattttg
     7201 ggcgccgcca ccgatttcaa gccgagcacc ttgccggagc ggagcatcgc gcgcgtgagc
     7261 gccgtggttt ctcgttcgtc gagaccgcgg aggagggcgg ccatcagcca ggcgctcatc
     7321 tggtaatccg cgacgcggcc ggccaggtag cccgcgacga gcccgtcgat ttcggcctcg
     7381 gagagccgct ggccgtcgcg ttttttgacg atcagctcga cgggattctc gagggcacgc
     7441 gctcgcatgg gcggtcgccg aagctacccc gcagcgcttg gcgacggaac ctcctcacgc
     7501 cgccccgcct cgtccgcacc cgagaccgtt cggtggctcg ccaattttag cggcctgcaa
     7561 gtgtggaggc cgcaaaaatt ggctccgtcg gccccatctt gtctgcgggt gcttctttgg
     7621 ttccatcacc gcagctgcgc tgcggtgtac cctccggcca tcgtggaacg ccggcagcgc
     7681 gggcgccccg caggaaaatt cacccagcac cggcgcgtcg accgcctgcg cgagatcctc
     7741 ggccgccacc cgaagggctt gtcgctctac gagctcgcgg acgcgctcgg cgtcaccgtg
     7801 cgcacgatgc gccgctacat ggtcgagatc gagcgtgagt tcgagctcga cagcgccccc
     7861 gtcaaggcgg gcggacaact gctctggcgc attcgctcgg gagaaatccc acgcaagcta
     7921 gagctcaggc gcacgcaggc gtacgcgcta ctcgccgcgc gccgcgtgtt cgagcccatg
     7981 cgcggctcca cgctgttcga ggagatcgac ctcgccatca acaaactgct cgccttcgcg
     8041 cagcgccccg ggcgcggccc gaacgccggc ctcgccgacg ctcagctcga gcaacgcttt
     8101 ttgtacctgc cgcacgcgcc caaaaattac gcgcaaaaga ccgaagagct cgacgatctg
     8161 ttccaatccg tctccgatct gcggccactc tccctgctct atcgcagcgc cacgcgcgcc
     8221 gacgaggagc gcatcacgat ccatccgtac gcgctcgtcc tgcaccgcga ctcgatttac
     8281 tgcgtcggct accacgtggg ccgccaggag atccgcacct tcgtgctcga tcgcatgcgc
     8341 gacacccagt gcgccgtcag cgagcgcttc gagctgcccg ccgatttcct cgtcgaccag
     8401 tattttcaag gcgagttcgg gatctggcgc gacgccacgc cccacaaagt cgtggtcgag
     8461 ttcgacgctt acgccgccga ctacgtgcgc atgcgcaccg tgcacgcctc gcagaagctc
     8521 cagagcatcg cgggcggcgg tctgcgcctc acgatgacgg tcggtaacct cctgcccgtc
     8581 gtgagctggg tcctcgaatg gggcggccgc gcgcgcgtga tcgagccgcc cgagctcatc
     8641 gcacgcgtca agaccgagct cgaagccgcg ctcgagcact accgcgacga caagaaagcc
     8701 gcgcccaagc gcgcgccgcg ctgagtcaat gcgccgagcg gttcgcgcga tactgcgcga
     8761 gcacgcgctt cacgtattcc tgggtctcgg gaaagggcgg gatgccgccg tagcgcatca
     8821 cggcgccttc gcccgcgttg tagcccgcga tggtgagctc gatgtcaccg ttgaagagat
     8881 tcgcgagcac gcgcaggtaa cgcacaccgc cgaagatgtt ctgccgcgga tcgaagatgt
     8941 ccgtgacgag catgcgttcg gcggtctcgg gcatgagctg catcaagccg cgcgcattcg
     9001 caggcgagac ggcgcgcgga tcgaagtcgc tctcgacttg aatcaccgcg cgcacgagat
     9061 cctcgggaat ttggtagagc gcggcggctt gtcggatgtg ctcgtcgtag cggccatagc
     9121 gcgcgggcga gctgtcggac ggcatgtgca cgggcggccg cgacgtctcg gtgcggatca
     9181 cgagcttgcc gctcttgctc ggtgaattgg tgaagctgat gacgccgtcg gcgccgacgg
     9241 tcttgtaaat gtcggcctgg ctcggggcgg cgaaggtgag ggcggccgcc ggaaccgcgg
     9301 cgagcagggc ccagcgctta cgggtccagg cgagaggcga agcaggcatc agccttccaa
     9361 tgataccgag acagggccgt gtgggtgcaa gtaacccacg cgatcgcccg gggaaacgct
     9421 ccttcgctgc cggctattcc agggcttttg ctctggcgcg cccggaggct cgcgtcagtc
     9481 gtccgtgagg taggtgtagc tccggagcga ttcttcgtag tggtgcatga gcgtgcgcat
     9541 ctgttcgttg gtgatgcgac cttggctcac ggcgcgctcg gcttggcgcc gcaccgcctc
     9601 gatcatgttc tcgggtacgt actcgacgta gcggagcacc tccgagacgc tgtcgccctt
     9661 gatcacgtga ccgatctggt agcccgtgtc ggtgagctcg acgtgcacgg cgttggtgtc
     9721 gccgaagagg ttgtgcaaat cgccgagaat ttcctggtag gcgccgttca ggaacatgcc
     9781 gaggaagtag ctctcgttgt ccttgagcgt gtgcacggcg agcgtgctct tcacgtcctc
     9841 gacgtcgatg aagtggtcga tcatgccgtc ggagtcgcac gtgagatccg cgagcgtcgc
     9901 cgaaaccgtc ggctcttcgt cgagccggtg aatcggcatg atcgggaaca ggtgatcgat
     9961 ggcccagatg tcgggcgccg actggaacag cgagaagttg cagtaataga tggcgctcag
    10021 gttcttatcg aggtgctgga gctcctcggg cacgaacttg aggcgcttga gcgtctggtg
    10081 gatcttctcg cagcagttcc aaaacaggcg ttcgacctgc gcgcgctcgc gcagcgacaa
    10141 gtagccgtac ttgaagaggc tctgcgcttc ttccttggct tgcgaggcgt cgtggtagct
    10201 ctcctgcacg ttcttcggct ggatgccgct gtgcgtctcg aagagctcct tgagcaggcg
    10261 gtgtgcgtcg ggtcgcggct cgaccggttc gccgaattgc acgtggctgc gcccgacgac
    10321 ctcgagcacg agcaccgagt gatgcgccgc gatggcacga ccgctctcgc tcacgatcgt
    10381 cggcacgggc aggtcggctt tgttgcacgc cgcttggatg tgcgagacga cgtcggccgc
    10441 gtactcctcg agctggtagt tcttggacgc gtgaaagtcg gtcttcgaac cgtcgtaatc
    10501 gacggctagg ccaccgccca cgtcgatgta gcccatcttg cagccgagct tggcgagctc
    10561 gacgtagatg ttcgacgctt cctgcatcgc gttcttgatc gggatgatgc tcgagatctg
    10621 gctcccgata tggaagtgga ggagctgcag gcaatcgagc atgccgcgct cggccaggcg
    10681 gtccacgacc tcgaccatct ccgacgtcgt gagaccgaac ttggcgcggt cgcccgccga
    10741 atcagcccag cgcccgacgc cgcgcgtcgt gagcttcgcg cgcacgccga gcatgggacg
    10801 gatgcccacc ttctcggacg cgcgaaagac gacgtcgagc tcctcgatgc gctcgagcac
    10861 gaccatcacg gtcttgtcga acttctgggc gagcagcgcg gtctcgatgt agctggagtc
    10921 tttgtagccg ttgcagatga tcagaccgcc gacttcttgc atggcggcga gcgtgatcaa
    10981 aagctcgggc ttcg
//
LOCUS       DATIML010000472         2578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1539432, whole genome shotgun sequence.
ACCESSION   DATIML010000472 DATIML010000000
VERSION     DATIML010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539432"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1224)
                     /locus_tag="VLJ38_08225"
     CDS             complement(<1..1224)
                     /locus_tag="VLJ38_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSU39539.1"
                     /translation="MQVLPGSPHPLGATWDEDGTNFALFSANAEAVELCLLSEDDTET
                     RIPLKERTAYVWHAYVPGVPLGQRYAYRVYGPYDPARGHRFNPNVLLLDPYAKAVDRV
                     EDWSRGCFAYELDGSPEADLHPATKPALGAPRGVVINPTFDWEGDEAPNVPPRRSVIY
                     EAHVRGFTKLHPEVPEPLRGTYLGMAHPAIVRYLKDLGVTAVELMPVHAFVDDKLLLD
                     RGVRNYWGYNSIGFFAPDVRYRSAAELGSEVREFKQLVKTLHRAGIEVILDVVYNHTA
                     EGNHLGPTLSFRGIDNSTYYRLVENDKRYYFDTTGCGNTLNVRSPQVLALIMDSLRYW
                     ASEMHVDGFRFDLAAALARELHEVDQLSSFFTLIHQSPTLSRMKLIAEPWDIGPNGYQ
                     VGNFPVLWAEWNGRFR"
     gene            complement(1411..2175)
                     /locus_tag="VLJ38_08230"
     CDS             complement(1411..2175)
                     /locus_tag="VLJ38_08230"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSU39540.1"
                     /translation="MRAPEDTRRALLTGAATGAWLLFTGCTRASSPAAEPETARRWDV
                     TKGGEKAKGEDKEPVVTPGEDLMQEHGLVERVLLVYEEVARRIEAHAAVDPATLGGAT
                     ALVERFIQDYHEKSEEEFVFPALEAKKREVELVRVLRLQHQRGRELTAEIARRTKNFK
                     ASPELAAMLRDFSRMYRPHAAFEDTRAFPAFRETLDDDAYRELGEKFEDREHERLGAR
                     GFEQAVAEIARLEGSLGIGDLDKFTPESPTHASDKG"
BASE COUNT          406 a          816 c          892 g          464 t
ORIGIN      
        1 gcggaaacgc ccgttccatt cggcccacag caccggaaaa ttaccgactt gatagccgtt
       61 cggcccgata tcccagggct cggcgatgag cttcatgcgg ctcagcgtcg gcgactgatg
      121 aatgagcgtg aagaagctcg agagctgatc gacctcgtgg agctcgcgcg cgagcgccgc
      181 ggccagatcg aagcggaagc cgtcgacgtg catctccgag gcccaataac ggagcgagtc
      241 catgatgagc gcgagcactt gcgggctgcg cacgttcagc gtgttgccgc agcccgtggt
      301 gtcgaagtag tagcgcttat cgttttcgac gagccggtag tacgtgctgt tgtcgatgcc
      361 gcggaagctc agcgtgggac cgaggtgatt gccttcggcc gtgtggttgt agacgacgtc
      421 gagaatcacc tcgatgccgg cgcggtgcag cgtcttgacg agctgcttga actcccgcac
      481 ctcgctgccg agctcggcgg ctgagcgata ccgcacgtcc ggagcgaaga aaccgatgct
      541 gttatagccc cagtagttgc gcacgccgcg gtcgagcaag agcttgtcgt cgacgaacgc
      601 atgcacgggc atgagctcga ccgccgtcac gccgaggtcc ttcaggtatc ggacgatggc
      661 gggatgggcc atgccgaggt aggtgccgcg cagcggctcg ggcacctcgg ggtggagctt
      721 cgtgaaaccg cggacgtgcg cttcgtaaat cacgctgcgg cggggcggca cgttcggcgc
      781 ttcgtcgccc tcccagtcga acgtcggatt gatgacgacg ccgcgcggag cgccgagcgc
      841 tggtttcgtc gcggggtgca ggtccgcttc gggactgccg tcgagctcgt aggcgaagca
      901 accgcgtgac caatcctcga cgcgatcgac tgctttcgcg tagggatcga gcaggagcac
      961 gttcggattg aagcggtgtc cgcgcgctgg atcgtaggga ccgtagacgc gataggcgta
     1021 gcgttggccg agcggcaccc cggggacgta ggcgtgccaa acgtaggcgg tgcgttcctt
     1081 gagcggaatg cgcgtctcgg tgtcgtcctc gctgagcagg cagagctcga cggcctcggc
     1141 gttcgccgaa aagagcgcga aattcgtccc gtcctcgtcc cacgtggccc cgagcggatg
     1201 gggcgagccc ggcaacactt gcatcgtccc gcgtcgcggc tgccagaagc gtgccgcccc
     1261 tcgcctgctc tcgccggcag cgagaatgcc gtaaaaacgt gattagcgcg ggagcggccg
     1321 gtggtgctgc atgttgcgtg cacgctgcat tttgccccgc gtgggcgccg aggccgggcg
     1381 tccgagcgag agcgcttcga ctgtgtgagc tcagccttta tcgctggcgt gggtcggaga
     1441 ctcgggcgtg aacttgtcga gatcaccgat accgagtgag ccttcgagtc gcgcgatttc
     1501 ggccacggct tgctcgaatc cccgagcgcc gagccgctcg tgctcacggt cctcgaactt
     1561 ctcgccgagc tcgcgatacg cgtcgtcgtc gagcgtctcg cggaacgcgg ggaacgctcg
     1621 cgtgtcctcg aacgcggcgt ggggacggta catgcgtgaa aaatcgcgga gcatcgcggc
     1681 gagctcggga ctcgctttga agttcttcgt gcggcgtgcg atctcggcgg tgagctcgcg
     1741 cccgcgctga tgctggagcc gtaggacgcg cacgagctcg acctcgcgct ttttcgcctc
     1801 gagcgcgggg aacacgaact cctcttcgct cttctcgtga taatcctgga tgaagcgttc
     1861 gacgagcgcc gtcgcgccgc cgagcgtggc gggatccacc gcggcatgcg cctcgatccg
     1921 ccgcgccacc tcctcgtaga cgagcagcac gcgctcgacg aggccgtgct cctgcatcaa
     1981 gtcctcaccc ggcgtgacga cgggctcctt gtcctcacct ttggctttct ccccgccctt
     2041 cgtaacgtcc cagcgtcgag ctgtctcggg ttcggctgcg ggcgagctcg cgcgcgtgca
     2101 gccggtgaag agcagccagg cgcccgtcgc tgctcccgtg agtagtgctc tgcgcgtgtc
     2161 ctccggtgct cgcatcgacg tgagtcctct ctgaccgagc ggtcagcgcg agtattgcgt
     2221 gtcgctgccc gcaggaccag cgcgtctctg ccgagcgtcg acgtgacccg gccagcctga
     2281 cacgccgagg cggattgacg cgatccgcac tccacgagtc gtgcggtctt ggaagaccag
     2341 atcacgatcg gcgcgggtcg ccaatcgcta cgtgacgagc cggcgaggcc ggggctaggg
     2401 cggcttcggc cgggtagtga cgcaggcctt ttggcagggt cgtttcgcgt gcgtcgcagc
     2461 gagaaagtct cggaacgagt ttgcacccga acgaaaagcg gctcggccgt gctgagggac
     2521 agcaatgcac cggcctcgcc ggctttcgcg tagctcgggg cctctgcggc gatcgtga
//
LOCUS       DATIML010000473        12423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3271295, whole genome shotgun sequence.
ACCESSION   DATIML010000473 DATIML010000000
VERSION     DATIML010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 12423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12423
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3271295"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /locus_tag="VLJ38_08235"
     CDS             complement(<1..235)
                     /locus_tag="VLJ38_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39541.1"
                     /translation="MLAFVADGEWGTPDRGLLEAIVAELRALGAALVVATGARAFCFR
                     PDVARDELVPPRLASEPGMRALYRLHGVQPASDA"
     gene            580..1098
                     /locus_tag="VLJ38_08240"
     CDS             580..1098
                     /locus_tag="VLJ38_08240"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSU39542.1"
                     /translation="MAHPIETVIAKGAGKVAAVEARAKGLKGVFTKLAEQHREVATLL
                     SRAESTNDVEKRRDLWREIKKQLISHERAELSEIYPMLSAYDGTRDIVSRHGQEAQVL
                     ETTIRQIDAMSLDTPAWKPSIERLITLVKEHVAEEEGEFFPRAQETLGDEAVKQLEEP
                     FMRAKQREMNAI"
     gene            1198..2211
                     /locus_tag="VLJ38_08245"
     CDS             1198..2211
                     /locus_tag="VLJ38_08245"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSU39543.1"
                     /translation="MVLALVAAGAAANAARALFVPLVFALMLFFLLRPAVRFLVLRRV
                     PRLLASALVLGSTLGLLALATVELAVPAVAWSQRLPEAVHQIELKSRGLRYPVEHLTN
                     ALQALSRLVEVGHAETVPRVDVVRPGFFEGLLARAASIATQLALTVVAAFFLLIDGDA
                     LLGRLFRLAPAPRADQRASVVINEVGARMSAYLGAVTLVNIGLGTILTVCLFLLGMPN
                     PWLWGGLAAVLTYMPYVGPAIGIGLVGLASFLAFPTPGAAVLPPLVYLALSSLEGNIV
                     TPLVLGHTFAVRPLVLFVWLALWAWLWSIPGAILAVPMLMLFKMICEETPELATVAYL
                     LRR"
     gene            complement(2146..3033)
                     /locus_tag="VLJ38_08250"
     CDS             complement(2146..3033)
                     /locus_tag="VLJ38_08250"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HSU39544.1"
                     /translation="MSVRGRFSSFMNLVRSVNDRANEHDVDIVAAGLSFYALLGLFPA
                     LLAIVSIYGLVADPASVEAALSALARTLPPQARKLVIESVAEFVRRSSGDLTFRIVFG
                     LVGVLWSSSSGMSVLVRAINVASGAKEHRSFFGRRAIALLFTFSGVVGVAVVVPALIA
                     VPRLLHLFRAETLLVLVPPLLLAGIAFVTLLALFRYAPYRKPATFVELAPGAGLASVA
                     WLVVSGAYSLYVRFFAHFSSTYGALEGVIVLELWFYFSAQVLLYSAELNVVLARRRLP
                     PEQVGDGGELGRLLTNHLE"
     gene            3508..12249
                     /locus_tag="VLJ38_08255"
     CDS             3508..12249
                     /locus_tag="VLJ38_08255"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HSU39545.1"
                     /translation="MSAIPERSCPALDPAVCWDEPDALRGDIHVADQLVSHAAALARS
                     HGPPSHTVATGGLRQRFTAVRRQIHEAYAVLTERLKQGKDPSPAEEWLLENSHVVEDQ
                     IREIDEDLPRGYLLELPRLALGRMRGYPRVYALCLDYLRHTDARLDLTTLSQFVESYQ
                     GVEPLTIGELWAVPIMLRLGLLLVVGALAASEASAGNRERADAWSERLLAARHNALEL
                     GAELVALERSGAPITAPFLVQLARKLREHDDAALAVAFDWLALQSQKLGSSPEELARL
                     QHLKQAADQVSVGNAVTSMRAVAALDWNAFFERTSAVEAVLRRDPFGTYAATEPETRD
                     RYRHAVERLARRGEGGEVGVARLALALAEQAREQAPTDVKRAHVGYYLTDDGMSLLEG
                     LVRYRPTAGERVRRGLLGHPELFYFGSIGLLALGLVALMVVVALGRVALGIEGVALAV
                     GVGLLALLPASEVGSALTQAFVTAVLRPRLLPRLDFEAGIPAQYRTLVVVPCLLDGKQ
                     TLDTLLEELEVRSLANGDEHLHFALLADFTDASSAELPSDGELVRAALEAVRRLNARH
                     PGKEPRYWFLHRRRLYNPSEGTFMGWERKRGKLEELNRLLRGATDTSFAWVDAPSELL
                     PTVRYVITLDADTDLPRDTARELVATLAHPLNAAEFDAERRRVVRGYGIAQPRVGPLP
                     PSSRKSRYAWLTAGPAGLDPYTTAVSDVYQDLFAEGSFTGKAIYDVDAFAAALSDRVP
                     ENALLSHDLFESFFARSALVTDVEVLDEQPRSYEVHAARQHRWMRGDWQLVRWLVGRV
                     PARDGTMRPNDLRALDRFKLADNLRRSLLPPTLVLLAVFAWLVGGRLAVAAGLLFLGV
                     LVTPLVAQAVLAVTREASRISGAPWAGFGSAMGRGVLGVLVSLVFLLDQALLSLDAIS
                     VALYRLVAKRRLLEWVTMRQSAAGRRNGTSPRLLLASALAFALAVGLFAWRAHALISA
                     LPLLTAWFVAPGVARWLGAPLPARRTGELSVDDRRLLRLVARKTWRFFARFVTEQDHF
                     LPPDNFQQEPRGVVAHRTSPTNIGLYLLSVVAAHDFGVLTRRELCERLERTLDTLDRL
                     PRRDGHLLNWYDTETLKPLAPEYVSTVDSGNLAAYLWTIASASSDLAQSPIVTGEPFL
                     SIADALELASRAGSGSATAARLRAFEAEVRALAEPRPGGLLGALEALENTRDALAELG
                     PVLAGEPTETRYWVAEAERTARAWVDELTTLAPYLTLLRETAPVVDGSMAKLWVDLRA
                     RLTASHGLAGLETAATAVRELLDDASEAARRPGSAPAAARLFAELDDALDRTLDAVSR
                     RLHELERVATRCRSLADGMSFGFLLDPERELFATGYNVSNARLDTSHYDLLASEARLA
                     SLVAIAKGDVPEKHWFRLGRPRARVASGRALLSWSGSMFEYLMPLLVTESLPNTLLDE
                     TMQAAVRRQRAYGAEQGVPWGVSESAYNVMDLEMTYQYRAFGVPGLGLKSGLAEDLVI
                     APYATVLAALVEPAAAVKNLRTLAKDGLEGDYGYFEAMDFSATRVPPGKRGVVVRSFM
                     AHHLGMSFVALDNVLHDRVMQRRFHAEPRVKATALLLEERIPTGAPLLEVPEAALAAP
                     VRHADDLDALEHVRLEDMAPVRLHLLGHGALSTFVTTAGSGALTWKGMDINRFREDSV
                     FDAGGIYAYVRDLGKRKTWSAAYYPSRRQADAYEVAFSIDRVEIHRRDGALETITEVV
                     PSPEHPAEVRRFTLKNHGSEPSELELTTFTELALAPRAADMAHRAFSSMFVETEFLPE
                     CGALVAHRRPRAPDETGIWVAQVLTPEDGGFGPIDFDTSRASFVGRTGSLERPRAFAD
                     TTTALAQRTGAVLDPAFVLRRRVRLAPGAVVRVSLTTIMAETREECLHWAGIYAAAQA
                     IPRAFELAWADARVELRHVGVTAVQAHRFQRLLSAIMFPLPGLRASFEPSTLGSSGKN
                     ALWARGISGDLPLVVLRLDHPDFDELFRELLLAHAYFRVNAVSFDLVVLNEEPGGYLQ
                     PLYNQALDIVRGTHAEGLLDQRGGIFVRRTDQMPEGDQKLVLAAARAVFTASGGSLLR
                     QLKRATRRVQLPELLAPTERPTPRPSLPPAPQSELVFHNGLGGFTPDGREYVMTLDRQ
                     TRTPLPWCNVMANASYGSVVSESGSSFTWAGNSQRQRLTPWSNDPLLDPSGTELYVRD
                     DDDGSVWSATPRPAGGSAVYTVAHGQGYSRFSHARVGLSHELTLFVAAHDAVAFQRLR
                     IENRGDTRRRLSVFGVVEWVLGGNRETSRLTVVTAWDAAARTLTATNPLAMSPQAVAF
                     YAATAPITSFTANREEFFGMPGSRTWPHALRRSALSGQYGMGLEPCAALETRVTLEPG
                     ESFEVTYVLGHGKDLEQARVLAASYADEAAVARAFGAAVARWDELLSVITVKTPDPAL
                     DLLMNRWVLYQALSCRIWARSGFYQSSGAFGFRDQLQDVLCLLHTLPGAAREHLLVAA
                     ARQFVEGDVQHWWHTEAGDGVRTHCSDDKLWLPFAVAEYVRVTGDRAVLDEPVPFLSE
                     RLLAPEEHDLYSTPASTTDTAPLYEHCARALESSLGTGPRGLPKMGAGDWNDGMNRIG
                     VKGEGESVWLAWFLAKTLNDFAPLAQARRDARVTRWLEHARRVCEAAETHAWDGAWYR
                     RAFYDDGRPVGTASAAECRIDAIAQSWAVLAGSADRRRAASAVLESERLLVREDARIM
                     CLLDPPFTGKDGDPGYIASYPGGIRENGGQYTHGVLFTLRALAELGEAERAEHLLGIL
                     NPVRHALTPAAVERYQVEPYVVAADVYSDAAHAGRGGWTWYTGSAGWFYRIVLEDLLG
                     FRRSGDKITVSPCIPLAWGGFELDYRYGRSTLRVRVENGHATPAAGDSMRLDGRAQRG
                     HEIALVDDGQTHELRVVVGERRLRSSA"
BASE COUNT         1857 a         4320 c         4222 g         2024 t
ORIGIN      
        1 gcgcgtccga ggcgggctga acgccatgaa ggcggtacaa agcccgcatg ccgggctcac
       61 tcgcgagcct tgggggcacg agctcgtctc gagcgacgtc gggacgaaag cagaaggctc
      121 gcgcacccgt cgcgaccacg agcgccgccc cgagcgcccg gagctcggcg acaatggctt
      181 cgagcagtcc gcgatccggc gttccccact ccccatcggc tacaaaagcc agcacgacag
      241 gctgccccag tgccgcgagc cacgcgcgcc acgcgtgctc gagagcgtcg ggccgggcag
      301 gaaacacggc tttcgccaag caaaacgcgt acccgcggga gtgctgctgg agatccgcga
      361 aagttttcgg atccgagtct gcgcctgcgg gcaatcctgc gacgggtggg gcaatccagc
      421 gcgaatcagg tgcgcccgaa gcccgtcagc cgagcgcgag gctcgcgtca gctgcgaccg
      481 agactcggcc cgacggagcg gcacggcgtg cctgcagcgt gaccgccggg cacggactgt
      541 gcagctaccc ccctggtcgt cacgaaccag gagcgatgca tggcacatcc gattgaaacc
      601 gtgattgcga agggcgccgg aaaggtcgcg gccgtcgagg cccgcgccaa ggggttgaag
      661 ggagtcttca ccaagctcgc cgaacaacat cgtgaagtgg cgacgctact gtcgcgagcg
      721 gagagcacga acgatgtcga aaagcgtcgg gacctctggc gcgaaatcaa aaagcagctc
      781 atctcgcacg agcgcgccga gctcagcgaa atctatccga tgctctcggc gtacgacggc
      841 acgcgcgaca tcgtgagccg ccacggtcag gaagcccagg tgctcgagac cacgattcga
      901 cagatcgacg cgatgtccct cgacacgcct gcgtggaaac cgtcgatcga gcggctgatc
      961 acgctcgtga aggagcacgt cgccgaagag gaaggagagt tcttcccgcg cgctcaggag
     1021 acgctcggcg atgaagcggt gaagcagctc gaagagccgt tcatgcgcgc caaacaacgc
     1081 gaaatgaacg cgatctagcc gatgcagagc gcgcactcgc ttccgcctct aggccgcccg
     1141 ccacgcggag cgaggcactc gcacgacgag caggccagga ccaaatcgac agcgcttttg
     1201 gtcctggcgc tcgtcgctgc cggcgccgcg gcaaacgcag cccgcgcctt gttcgtgccg
     1261 ctcgtgttcg cgttgatgct gttcttcttg ttgcgtccgg cagtccgctt tctcgtcctc
     1321 cgccgcgtcc cccgcttgct cgcgagcgcg ctcgtgctcg gcagcacgct cgggctcttg
     1381 gcgctggcca ccgtggagct cgccgtgccg gccgtcgcgt ggtcgcagcg cctgccggaa
     1441 gccgtgcatc aaatcgagct caagagccgc ggactgcgct acccggtcga gcacctcacg
     1501 aacgccctgc aggcgctgag tcgtttggtg gaggtgggac acgcggagac ggttccgcgc
     1561 gtcgacgtcg tgcgtccggg cttcttcgaa gggctgctcg cgcgagccgc ttcgatcgcg
     1621 acgcagctcg cgctcacggt cgtggcggcc ttcttcctgt tgatcgacgg cgacgcgctg
     1681 ctcggtcgtc tgtttcgtct cgccccggcg ccacgcgccg atcagcgtgc gagcgtcgtg
     1741 atcaacgagg tcggcgcgcg catgagcgcg tacctcggcg ccgtcacgct cgtgaatatc
     1801 gggctcggca cgatcctcac ggtgtgcttg tttctgctag ggatgccgaa tccgtggctc
     1861 tggggaggct tagccgcggt gctcacgtac atgccgtacg tcggccccgc catcggcatc
     1921 gggcttgtcg gactcgcgtc ctttctggcg ttccccacgc ccggtgcggc ggtgttgccg
     1981 ccgctcgttt acctggcgct ctcgtcgctc gagggcaaca tcgtaacgcc gctcgtgctc
     2041 gggcatacct ttgcggtgcg cccgctcgtc ttgttcgttt ggctggcgct ctgggcgtgg
     2101 ctctggtcga tcccgggagc gatcttggcc gtgccgatgc tgatgttatt caagatgatt
     2161 tgtgaggaga cgcccgagct cgccaccgtc gcctacctgc tccggcggta agcgccggcg
     2221 cgcgagcacg acgttcagct ccgcggagta gagcagcacc tgcgcggaga aatagaacca
     2281 gagctcgagc acgatgacgc cttcgagcgc gccgtacgtc gagctgaaat gcgcgaaaaa
     2341 gcgcacgtac agcgagtaag cgccgctcac gacgagccag gcgacgctcg cgagcccggc
     2401 gccgggagcg agctcgacga aggtcgccgg cttgcgatac ggcgcgtagc gaaagagcgc
     2461 gagcagcgtg acgaacgcga tgcccgccag gaggagtggg ggtaccaaga cgagcagggt
     2521 ttcggcgcga aagaggtgca aaagccgcgg gacggcgatg agggcgggca cgacgacggc
     2581 gacgccgacc acgccggaga acgtgaagag cagggcgatg gcgcgacgcc cgaagaagct
     2641 ccggtgctcc ttggcgccgg aggcgacgtt gatggcgcga acgaggacgc tcatgccgga
     2701 cgaagagctc cagagcacgc cgaccaagcc gaaaacgata cgaaacgtga gatcgcccga
     2761 ggagcggcgc acgaactcgg cgacgctctc gatcacgagt ttgcgcgcct gcggtggcag
     2821 cgtgcgcgct agtgcgctga gcgccgcctc gacgctcgct ggatcggcga ccaagccgta
     2881 aatcgagacg atggcgagga gtgcgggaaa tagaccgagc agcgcgtaga agctgagtcc
     2941 cgcggcgacg atgtcgacgt cgtgctcgtt ggcgcggtcg ttgacgctgc ggacgaggtt
     3001 catgaaggac gagaaccggc cgcgcacgct catgaggctc gacggtgact caattcacgt
     3061 tgcgtgccca gcctcgctcg cgagttttcg gggcgtcctg ctacacatgc gtcgcattgc
     3121 gacaggagct ccgcgtgaat tcgccgatga aagcaggttt tggctggtgc cccgagtggc
     3181 acgaacgatg cacagctgat tttccgccat gacacgcgtt caccctgggg ctcctgccga
     3241 actcgattgg atcaacgttt cggtttggcg ccgctgtccc atctgcggcg gctccgccgg
     3301 ctgcaagctg cacgccgagg gtcatttcgc agcctgcgga cacgaaccgt ccgactggcc
     3361 tctgacgagc ggcgcctggc tccatcgctt ggacgcgccg gccaccgcct cgtcgccctc
     3421 gcaggacgcc gtcgcgtcgc cgagggtggc cgtcaccgcc tcataaaccg cctcatgaat
     3481 tttagcacac cgctaccggc ggagcgcgtg tccgcgattc cggagcggtc gtgtcccgcg
     3541 ctcgacccgg ctgtctgctg ggacgagccc gacgcgttgc gcggcgatat tcacgtcgcc
     3601 gaccagctcg tctcgcacgc cgcagcgctc gctcgctcgc acgggccgcc ctcacacacc
     3661 gtcgcgacgg gcggcctgcg acagcgcttc acggccgtaa gacgtcaaat tcacgaggcg
     3721 tacgcggtcc tcaccgagcg gctgaagcag ggcaaggatc cctcgcctgc cgaagagtgg
     3781 ctgctcgaaa actcgcacgt cgtcgaagac caaatccggg aaatcgacga ggacttaccg
     3841 cgcggctacc tgctcgagct gccgcgcctc gccctcggca ggatgcgcgg ttacccgcgc
     3901 gtgtacgcgc tctgcctcga ctacctgcgc cacaccgatg cgcgcctcga tcttacgacg
     3961 ctctctcagt tcgtcgagtc gtaccagggg gtcgagccgc tcacgattgg cgagctctgg
     4021 gccgtgccca tcatgcttcg gctcggcctg ttgctcgtgg tcggcgcgct cgcggcttcc
     4081 gaagcgagcg ccggcaatcg cgaacgcgcc gacgcctggt cggagcggtt gctcgcggcg
     4141 cgccacaatg cgctcgagct cggcgccgag ctcgtcgcgc tcgaacgcag cggcgcgccg
     4201 attacggcgc cattcctcgt gcagctggcg cgtaaactgc gggaacacga cgatgcggcg
     4261 ctggcggttg cgttcgactg gctcgcgctg caaagccaaa agctcggctc gtcgcccgaa
     4321 gagctcgctc ggctccagca cctgaagcag gcggccgatc aggtctcggt cggcaacgcc
     4381 gtcacgagca tgcgcgccgt agcggcgctc gactggaacg cctttttcga gcgcacgagc
     4441 gccgtcgagg ccgtcttgcg ccgcgatccg ttcggaacgt acgcagcgac ggagcccgag
     4501 actcgtgatc gctatcggca cgccgtcgaa cgactcgcgc gtcgaggcga aggcggcgaa
     4561 gtcggtgttg cgcggctcgc gctcgcgctc gccgagcagg cacgcgaaca ggcgccgacc
     4621 gacgtgaagc gcgcccacgt cggttactac ctcaccgacg acgggatgag tctgctcgaa
     4681 ggcctcgtgc gttatcggcc gacggcgggc gagcgcgtca gacgcggctt gctagggcac
     4741 cccgagctct tctacttcgg ctcgattggc ctactcgcgc tcggcctcgt ggcgctcatg
     4801 gtcgtcgtgg cgctcggcag ggtcgcgctc gggatcgagg gggtcgctct cgccgtcggc
     4861 gtcgggctgc tcgcgctcct acccgcgagt gaagtcggca gcgcgctcac gcaagcgttc
     4921 gtcacggcgg tgctgaggcc gcggctcttg ccgcgcctgg acttcgaagc tggcatcccg
     4981 gcgcaatacc gcacgctcgt cgtcgtcccg tgtctcctcg acggcaaaca aacgctcgac
     5041 acgttgctcg aggagctcga ggtgcggtcg ctcgccaatg gcgacgagca cctgcacttc
     5101 gcgctgcttg ccgacttcac cgacgcgtcc agcgcagaat tgccgagcga cggcgagctc
     5161 gtgcgcgccg cgctcgaagc cgtgcgccgg ctcaacgcgc gtcacccggg caaagagccg
     5221 cgctactggt tcttgcaccg gcgccgcctt tacaacccga gtgagggcac cttcatgggt
     5281 tgggagcgca agcgcggcaa gctcgaggag ctcaatcggc tgctccgtgg cgcgaccgat
     5341 acgtcttttg cgtgggtgga cgcgccaagc gagctcttgc ccaccgtgcg ttacgtcatc
     5401 acgctcgacg ccgacaccga cttgccgcgc gacacggcgc gcgagctcgt cgcgacactg
     5461 gcgcatccgc tgaacgccgc cgagttcgac gccgagcgcc gtcgggtcgt ccgcggctac
     5521 ggcatcgcgc aaccgcgcgt ggggccgctg ccgccgagtt cgcgcaagtc gcggtacgcc
     5581 tggctcacgg cggggcccgc cggactcgac ccgtacacca cggccgtttc cgacgtgtac
     5641 caagacctgt ttgccgaagg ttcgttcacg ggcaaagcca tctacgacgt cgacgcgttc
     5701 gcggccgccc tcagcgatcg cgtgccggaa aatgcactgc tgtcgcacga ccttttcgag
     5761 agcttcttcg cgcgctcggc gctcgtgacg gacgtcgagg tcctcgacga gcagccacgc
     5821 tcctacgaag tgcacgccgc gcggcagcac cgctggatgc gcggtgattg gcagctcgtg
     5881 cgctggctcg tcggtcgggt gcccgcgcgt gacggcacga tgcgcccgaa tgatctgcgc
     5941 gccctcgatc gcttcaagct ggccgacaac ctgcgccgca gcctgttgcc accgacgctc
     6001 gtgctgctcg ccgtgttcgc gtggctcgtg ggcgggcgcc tggccgttgc cgccggtctc
     6061 ttgttcttgg gggtgctcgt gacgccgctc gtcgcgcagg cggtgctggc ggtgacgcgc
     6121 gaagcgagcc gtatttcggg tgcgccgtgg gcgggcttcg ggtcggccat ggggcggggc
     6181 gtgctcggcg tgctcgtgag tctcgtgttc ttactcgatc aggcgctctt gtcgctcgat
     6241 gcgatttccg tcgcgcttta ccggctggtc gcaaagcggc gcttgctcga gtgggtgacc
     6301 atgcgccaga gcgcggccgg gcgtcgcaac ggcacttcgc cgcggctctt gttggcgagc
     6361 gcgctcgcgt tcgcgcttgc cgtcggcctt ttcgcgtggc gcgcacacgc cctgatctcg
     6421 gcgctcccgc tgctcacggc ctggttcgtc gcgcccggcg tggcgcgctg gctgggggcg
     6481 ccgctgcccg ctcgacgcac gggcgagctg tccgtcgatg atcggcggct cctgcggctc
     6541 gtggcgcgca agacgtggcg cttcttcgcg cggttcgtca cggaacagga tcatttccta
     6601 ccgcccgaca atttccagca agagccgcgc ggcgtcgtcg cgcaccgcac gtcgccgacc
     6661 aacatcggcc tgtacctctt gtccgtggtc gccgcgcacg acttcggcgt gctcacgcgg
     6721 cgcgagctct gcgaacggct cgaacgcacg ctcgacacgc tcgatcgcct gccgcgccgc
     6781 gacggacacc tgctcaattg gtacgacacc gagacgctga agccgctcgc gcccgaatac
     6841 gtttcgaccg tcgatagcgg taacctcgcc gcgtacctct ggaccatcgc gagcgcgagc
     6901 tccgatctcg cgcagtcgcc gattgtcacc ggcgagccgt tcttgtccat tgccgacgcg
     6961 ctcgagctcg cgagtcgcgc tggctcaggc tcagccacgg ccgcacgcct gcgggccttc
     7021 gaggcggagg tgcgggcctt ggccgagccg cgtccaggcg gtctcctcgg ggcgctcgag
     7081 gcgctcgaga acacccgcga cgcgctcgcc gagctcggcc ccgtgctcgc cggtgaaccg
     7141 acggaaacac gctattgggt cgccgaagcc gagcgcaccg cgcgcgcgtg ggtcgacgag
     7201 ctcacgacgc tcgcgcccta cctgacgctc ctccgcgaga cggctccggt cgtcgacggc
     7261 agcatggcca agctctgggt ggacctgcgc gcgcgactca ccgcgtcgca cgggctcgcg
     7321 gggctcgaga ccgccgccac tgccgtgcgt gagctcttgg acgacgccag cgaggcggcg
     7381 cggcgacccg gcagcgcgcc cgccgccgcg cggctcttcg cggagctcga tgacgcgctc
     7441 gaccgcacgc tcgatgccgt gagccggcgc ctgcacgagc tcgagcgcgt ggcgacccgc
     7501 tgccgcagcc tggctgacgg catgagcttc ggcttcttgc tcgatccgga gcgcgagctc
     7561 ttcgcgaccg gctacaacgt cagcaacgcg cggctcgaca cgtcgcacta cgacctcttg
     7621 gcgtcggagg cgcgtctcgc gagtctcgtc gcgatcgcca aaggcgacgt ccccgagaag
     7681 cattggttcc ggctcgggcg gccgcgggcg cgcgtcgcgt ccgggcgcgc gctgctctcg
     7741 tggagcggct cgatgttcga gtacctgatg ccgctcttgg tcaccgaaag cctgcccaat
     7801 acgttgctgg acgaaacgat gcaggcggcg gtgcggcgcc agcgcgcgta cggcgccgaa
     7861 caaggcgtgc cctggggtgt ctcggagtcc gcctacaacg tcatggacct cgagatgacg
     7921 taccaatatc gcgcgttcgg cgtgcctggc ctcgggctca aatcgggcct ggccgaggat
     7981 ctggtgattg cgccgtacgc gacggtgctc gccgcgctcg tcgagccggc cgcggccgtc
     8041 aaaaatctcc gcacgctcgc gaaagacggc ctcgagggtg actatggcta cttcgaggcg
     8101 atggacttct cggcgacgcg cgtgccgccg ggcaagcgtg gcgtcgtcgt gcgctcgttc
     8161 atggcgcacc acctcggcat gagcttcgtc gcgctcgaca acgtgctcca cgatcgcgtg
     8221 atgcagcggc gttttcacgc cgagccacgc gtcaaggcga cggcgctcct gctcgaggag
     8281 cgcatcccga cgggcgctcc gttgctcgaa gtgcccgagg cggcgctcgc cgcgcccgtg
     8341 cggcacgccg acgacctcga cgcgctcgag cacgtgcgcc tcgaggacat ggcgcccgtc
     8401 cgactgcacc tgctcggcca cggcgcgctc tcgaccttcg tgacgacggc aggctccggc
     8461 gccctcacct ggaagggcat ggacatcaat cgcttccgcg aggactcggt gttcgacgcg
     8521 ggcggcattt acgcctacgt gcgcgatctc ggcaaaagga agacgtggtc ggccgcgtac
     8581 tacccgagcc ggcgccaagc cgacgcttac gaggttgcct tttcgatcga ccgcgtcgag
     8641 atccaccggc gcgacggcgc gctcgagacc atcaccgagg tcgtgccgtc acccgagcat
     8701 ccggccgagg tgcggcgttt tacgctgaag aaccatggtt cggagccgag cgagctcgag
     8761 ctcaccacct tcaccgagct cgcgctcgct ccgcgcgccg ccgacatggc gcaccgcgcg
     8821 ttcagcagca tgttcgtgga gacggagttt ttgcccgagt gcggcgcgct cgtcgcgcat
     8881 cgccgcccgc gcgcgccgga cgaaacgggc atctgggtcg cgcaggtgct cacgcccgag
     8941 gacggaggct tcggcccgat cgacttcgac acgtcgcgtg cgagcttcgt cggccgcacg
     9001 ggttcgctcg agcgcccgcg ggccttcgcc gacacgacga cagcgcttgc tcagcggacg
     9061 ggcgccgtgc tcgatccggc gttcgtctta cgccggcgcg tgcggctcgc gccgggcgcg
     9121 gtcgtgcggg tgagcctcac gaccatcatg gccgagacgc gcgaggagtg cctgcactgg
     9181 gcgggcattt acgcggcagc gcaggcgatc ccgcgcgcct tcgagctcgc ttgggcggac
     9241 gctcgcgtcg agctccgcca cgtcggtgta acggcggtgc aggctcaccg cttccagcgc
     9301 ctgctctccg cgatcatgtt tccgctgcct ggcctgcgcg cgtccttcga gccctcgacc
     9361 ctcggttcct ccggcaaaaa cgcgctctgg gcgcgcggca tatctggcga tctgccgctc
     9421 gtcgtgctcc ggctcgatca ccccgacttc gacgagctct tccgcgagct gctgctcgcg
     9481 cacgcctatt tcagggtgaa cgccgtctcg ttcgatctcg tggtgctcaa cgaggagccg
     9541 ggcggctact tgcaaccgct ctacaaccaa gcgctcgata tcgtgcgcgg gacgcacgcg
     9601 gaggggctcc tcgaccagcg cggcggcatc ttcgtgcgac gcaccgacca gatgccggag
     9661 ggcgatcaaa agctcgtgct cgcggccgcg cgcgccgtgt tcacggcatc gggcggctcg
     9721 ctcttgcgcc agctcaagcg cgcaacgcgt cgcgtgcagc tgcccgagct cttggcgccc
     9781 accgagcgtc cgacgccgcg cccttcgctg ccgcccgcac cacagagcga gctcgtgttc
     9841 cacaacggcc ttggcggctt cactcccgac ggccgcgagt acgtcatgac gctcgatcgc
     9901 cagacgcgta cgccgctgcc ctggtgtaac gtgatggcga acgcgagcta cggctcggtc
     9961 gtctccgaaa gcggctcgag ctttacctgg gcgggcaaca gccagcgcca gcgcttgaca
    10021 ccctggagca acgatccgct gctcgatccc tcgggcacgg agctctacgt tcgcgacgac
    10081 gacgacggct cggtgtggtc ggcgacgccg cgcccggcgg gcggctcggc cgtttacacg
    10141 gtcgctcacg gacaaggcta ttcgcgcttc agtcatgcgc gcgtcggctt gtctcacgag
    10201 ctcacgctgt tcgtcgcggc gcacgacgcc gtcgcgtttc agcggctgcg catcgagaac
    10261 cgcggcgaca cccgccgtcg cctgtcggtg ttcggggtcg tcgagtgggt gctcggcggt
    10321 aaccgcgaga cgagccggct caccgtggtc acggcctggg acgcagccgc gcgcacgttg
    10381 accgcgacca atccgctcgc catgtcgccg caagcagtcg cgttctacgc cgcgaccgcg
    10441 ccgatcacga gctttacggc gaatcgcgag gaattcttcg gcatgcccgg ctcgcgaacc
    10501 tggccccacg cgctccggcg ctcggcgctt tcgggtcagt acggcatggg cctcgagccg
    10561 tgcgcggcgc tcgaaacgcg cgtgacgctc gagccaggcg agtcgttcga ggtgacgtac
    10621 gtcctcggcc acggcaagga cctcgagcag gcgcgcgtgc tcgcggcctc gtacgcggac
    10681 gaagcggccg tggcgcgcgc cttcggcgca gccgtggcgc gttgggacga gctgctctcg
    10741 gtgatcacgg tgaagacgcc cgatccggcg ctcgacctcc tgatgaaccg ctgggtgctc
    10801 tatcaagcct tgagttgccg gatttgggcg cgctcggggt tctatcagtc gagcggcgcg
    10861 ttcggtttcc gcgatcagct gcaagacgtg ctctgcctct tgcacacgtt gcccggcgcc
    10921 gcacgcgagc acctgctcgt cgcggcggcg cgccagttcg tcgagggcga cgtgcagcac
    10981 tggtggcaca cggaagccgg cgacggcgtg cgcacgcact gctccgacga caagctctgg
    11041 ctgccgttcg ccgtggccga gtacgtgcgc gtgacgggcg atcgcgcggt gctcgacgag
    11101 ccggtgccgt ttctcagcga gcgcctgctc gctcccgagg agcacgatct ttacagcaca
    11161 cccgcgagca cgaccgacac ggcgccgctc tacgaacatt gcgcgcgagc gctcgagtcg
    11221 tcgctcggca caggcccgcg tgggctgccg aagatgggcg ccggcgactg gaacgacggc
    11281 atgaatcgca tcggcgtgaa aggggaaggg gagagcgtgt ggctcgcctg gttcctcgcg
    11341 aagacgctga acgacttcgc tccgctcgcg caggctcgcc gtgacgcgcg cgtgacgcgc
    11401 tggctcgagc acgcgcggcg cgtgtgcgag gcggccgaaa cgcacgcttg ggacggcgct
    11461 tggtaccgcc gcgcgttcta cgacgacggc cgtcccgtcg gtaccgcctc cgctgcggag
    11521 tgccgcatcg acgccatcgc gcagtcgtgg gcggtgctcg ccgggagcgc cgaccggcgc
    11581 cgcgcagcga gcgccgtgct cgaatccgag cgtctgctgg tgcgagagga cgcgcgcatc
    11641 atgtgcttgc tcgatccgcc cttcacgggc aaagacggcg accccggcta tatcgcgagc
    11701 tatccggggg gcattcggga aaatggcggc cagtacacgc acggcgtgct cttcacgctg
    11761 cgcgccctcg ccgagctcgg cgaagccgaa cgcgccgaac acctgctcgg catcttgaac
    11821 ccggtgcgcc acgcgctcac gcctgccgct gtcgagcgtt accaagtcga gccttacgtc
    11881 gtcgcagccg acgtctactc ggacgccgcg cacgccgggc gcggcggctg gacctggtac
    11941 accggttcgg ccggctggtt ttaccggatc gtactcgagg atctgctcgg cttccggcgc
    12001 tcgggcgaca agatcacggt ctctccctgc atcccgctcg cgtggggcgg cttcgagctc
    12061 gactatcgct atggtcgctc gaccctgcgc gtccgcgtgg agaacggtca cgctactccg
    12121 gccgccggcg acagcatgcg cctcgacggt cgcgcgcagc gcggtcacga aatcgcgctc
    12181 gtcgacgacg gtcagaccca tgagctgcgc gtggtcgtcg gtgagcgacg ccttcgctcc
    12241 tcagcgtgat caattgcctc gcgactgacg agctccgatc acgagctttc ggtcgttgcc
    12301 gcgccgacgg cggccttggc atggggtctg cacacggaag cagtgccgtg cggcgctcgt
    12361 cgcacgcatg agcaaggaga gccgcggtga aagcgaagca tgtcgtcggt cacccatcgt
    12421 ttc
//
LOCUS       DATIML010000474         4220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5006082, whole genome shotgun sequence.
ACCESSION   DATIML010000474 DATIML010000000
VERSION     DATIML010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4220
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5006082"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2510
                     /locus_tag="VLJ38_08260"
     CDS             <1..2510
                     /locus_tag="VLJ38_08260"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU39546.1"
                     /translation="STVSEWFRELTGTQADQPLAEATELITRSLGATEEDPETADLVT
                     CLAELCTGHAHTAADDADAARTRQLIVLGIRRLVAMATPLGPLVTVLDGVQWGDKQSL
                     EPFTEFLRQGEQLPVLAILTTRPDDRVGPLIEGLVRVELKGLSPENQLRLLQARLGVT
                     EGVQQACSDLVPRAAGNPFFLLEMVDTLLERGQLEIRERNGKQELVQVERPGQPALPL
                     PSTLEQLIADRLNELPPEEHGIVDWVSVAGGPLAVRDLVALTGEEATELVSRLCARGL
                     LDLKNEAVDVRHPLTRDVAYRTLERRRRVYMHRELGLSLAKTPLAKGLTAAVVARHLA
                     RGGERAAAGIAYIEAAHAARNGHQLALARRYYRRAVSLLPETDTCVLEAHEALESIYR
                     MQGRWRERRTHLRALRRLSRVSGKPRWVATALLVTAQFELDSGRLSKGLEWAQRGELV
                     ATQAGSPTLEVRARALIAETLHDLGDMQGALAAIDRALATADSTGAPMRQRAEVLRLR
                     GTLLRRVGRVHEAMEAQAEAVAVFRQVGARRHEARAKNSLAYALLVLGRFEDGITLAL
                     DAISIDLAVGGRFQIAKTLSTIGECYVALGDYDRGLAYMRRSREAHERYGEQDSRADT
                     LLSLAEMLFEVGDVTQAETLVGDAGALTAVTGSAYDSVHEKILRAVLARHAGDPGKAV
                     MHAFDARQSAEAQAYVAFHFYAMAIESSARVEMGEQHTGILLATTAMGAIETLQGSEY
                     GLFTRQLCCEALRKAGSPQAEEMRNRASDHVRRLLSYIRDPVLKGMFLRRRVVRDILG
                     KATADALAVASGAVLDPSPPEPVISGLTNAGPPELVR"
     gene            2708..3208
                     /locus_tag="VLJ38_08265"
     CDS             2708..3208
                     /locus_tag="VLJ38_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39547.1"
                     /translation="MTFAKRLKNTAVVHGGDPKKFARRCRVHPPCGPFAPLAHCPPGI
                     APIDALALRTFVPAEIGATVSVRGGLSLDGMSTTAMLCGQKPGTPYNCCNHTAIRAFV
                     GDIPNGARLEGMGCVGDESQLCCSVPAFGQEVVATGKISPETDAWLVSKGTRWRLENA
                     TLCTRD"
     gene            complement(3235..>4220)
                     /locus_tag="VLJ38_08270"
     CDS             complement(3235..>4220)
                     /locus_tag="VLJ38_08270"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HSU39548.1"
                     /translation="VFASTIFMGGVVLWLLAGGKYSLFNTVYFALITSASVGFAELPG
                     MAVRPDMRLVTSLLIVTGIGTIAFFQSTLTAILVEGVIGETFRRRRMQKRIDALEGHL
                     VVAGGGRTGRYIVEELAAIGREFVLVDRDEETVRRMNEEIGGNLLYVIGDATDDHTLL
                     AARVDRAEGVMAALTEDPDNLFIVMSARALNPKARIVSKVIEVENEAKIRRAGADQTI
                     SLHRMGGQRMVSELVRPKVTSFLDNMLRVTKNLRFEEVELPVDSRYVGKTLREVPIRQ
                     ETQLLVVALHSTDQGYVYNPSPDHALHAGMQLIVMGEIDGVEKLRELVNRQ"
BASE COUNT          661 a         1460 c         1438 g          661 t
ORIGIN      
        1 actcgaccgt gagcgaatgg ttccgcgagc tcacgggcac ccaagccgac caaccgctcg
       61 ccgaagcgac cgagctcatc acgcgctcgc tcggcgcgac ggaggaagac cccgagacgg
      121 cggacctcgt cacgtgtctc gccgagctct gcacggggca cgcgcacact gcggcggacg
      181 acgccgacgc cgcacgcacg cgccagctca tcgtgctcgg catccggcgc ttggtcgcga
      241 tggcgacgcc gctcgggccg ctcgtcaccg tgctcgacgg cgtgcagtgg ggcgacaagc
      301 agagcctcga gccgttcacc gaatttttgc gtcagggtga gcagctgccc gtgctcgcga
      361 tcctgacgac gcggcccgac gatcgcgtgg ggccgctcat cgaagggctc gtgcgtgtcg
      421 agctcaaggg cttgagcccg gagaaccagc tgcggctctt gcaggcgagg ctcggcgtga
      481 ccgagggcgt gcaacaggcg tgctcggatc tcgtgccgcg tgcggccgga aacccgttct
      541 ttttgctgga aatggtcgat accctgctcg agcgcgggca gctcgaaatc cgcgagcgca
      601 acggcaagca agagctcgtg caggtggagc gccccggtca gcccgccttg ccgctgccct
      661 cgacgctcga gcagctgatc gccgatcgct tgaacgagct gccgcccgaa gagcacggca
      721 tcgtcgattg ggtttcggtc gctgggggtc cgctcgccgt gcgcgatctc gtcgcgctga
      781 cgggcgaaga ggccaccgag ctcgtgtcgc ggctctgcgc gcgggggctc ctcgatttga
      841 agaacgaggc cgtcgacgtg cgtcacccgc tcacgcgcga cgtggcgtac cgcacgctcg
      901 agcgccggcg gcgcgtctac atgcaccgcg agctcgggct gagcctcgcg aagacgccgc
      961 tcgccaaggg tctcacggcg gcggtcgtgg cgcggcacct cgcgcgcggc ggtgagcgag
     1021 cggccgcggg catcgcgtat atcgaagccg cgcacgccgc gcgcaacggg caccagctcg
     1081 cgctcgcgcg ccgctactac cgccgcgcgg tctcgctgtt gcccgaaaca gacacgtgcg
     1141 tgctcgaagc gcacgaggcg ctcgagtcga tttaccgcat gcagggccgc tggcgcgaac
     1201 ggcggacgca cctgcgcgca ctccggcgcc tctcgcgcgt gagcggtaag ccgcgttggg
     1261 tggcgacggc gctgctcgtg acggcgcagt tcgagctcga ctccgggcgt ctctcgaagg
     1321 gactcgagtg ggcgcagcgc ggcgagctcg tggcgacgca agccggctcc ccgacgctcg
     1381 aggtgcgcgc gcgcgcgctc atcgccgaaa cgctgcacga cctcggcgac atgcaaggcg
     1441 cgctcgccgc catcgaccgc gcgctcgcga cggcggactc gacgggcgcg ccgatgcgcc
     1501 agcgcgcgga ggtgctccgc ctgcgcggca cgctgctccg gcgcgtcggt cgcgtgcacg
     1561 aagccatgga agcgcaggct gaagccgtcg ccgtgtttcg ccaggtcggc gcgcggcggc
     1621 acgaagcacg cgcgaagaac tcgctcgcct acgcgttact cgtcctcggt cgattcgagg
     1681 acggcatcac gctcgcgctc gacgcgatca gcatcgatct cgccgtaggc ggccgctttc
     1741 aaatcgccaa gacgctgagc accatcggcg agtgctacgt cgcgctcggc gattacgacc
     1801 gggggctcgc gtacatgcgc cgttcgcgcg aggcgcacga gcgctacggc gagcaggatt
     1861 cgcgcgccga cacgctgctt tcgctcgcgg agatgctgtt cgaggtcggc gacgtcacgc
     1921 aagccgagac gctcgtcggc gacgcgggtg cgctcaccgc cgtcacgggc agcgcctacg
     1981 actccgtgca cgaaaagatc ctgcgcgccg tgctcgcgcg ccacgcgggc gatcccggta
     2041 aagccgtgat gcacgcgttc gacgcgcgcc agtccgccga agcgcaggcg tacgtcgcct
     2101 tccacttcta cgcgatggcc atcgaatcct cggcgcgcgt cgaaatgggc gagcagcaca
     2161 ccggcatcct gctcgcgacg acggcgatgg gcgcgatcga aaccctgcag ggctccgaat
     2221 acggcctctt cacgcgccag ctctgctgcg aggcgctgcg caaggcgggc tcaccgcagg
     2281 ccgaggagat gcgcaaccgc gcctccgatc acgtgcgacg gctgctctcg tacattcgcg
     2341 atccggtgct caaaggcatg ttcctgcgcc gccgcgtcgt gcgcgacatc ctcggcaaag
     2401 cgacggccga cgcgctcgcc gtcgcgagcg gcgccgtgct cgatccatcg ccgcccgagc
     2461 ccgtgatctc cgggctcacg aatgccgggc cgcccgaact cgtgcgctag cgagccgagc
     2521 gatgcggacc ggggcgttgt gctgcgcgct tttgtcgctg acggcgctcg ggtgtcacga
     2581 gcgcaacgag gcagccgatg ggcggagttc cgtcacgcca agttccgctg cgagtgacgc
     2641 tgcggtttcg agtcggcccg aggtgactcc gcccggcgcg agtgcgatcc cgtggccgcc
     2701 ctacgccatg acgtttgcca aacggctgaa gaacacggcg gtcgtccacg gaggcgatcc
     2761 caaaaagttc gcgcgccgct gccgggtgca ccccccgtgt ggaccgttcg cgccgctcgc
     2821 ccattgtccc ccgggcatcg cgccgatcga cgccttggcg ctgcggacgt tcgttcctgc
     2881 cgaaatcggc gcgaccgtga gcgtccgtgg cgggctcagc ctcgacggca tgagtacgac
     2941 ggccatgctg tgcggccaaa agccggggac gccgtacaac tgctgcaatc acacggcgat
     3001 ccgcgccttc gtgggtgaca ttccgaacgg cgcacgcctc gagggcatgg gctgtgtggg
     3061 cgacgaatcg caactctgct gcagtgtgcc ggcgttcggg caggaggtgg tcgcgacggg
     3121 aaagatctcg ccggagacgg acgcgtggct cgtctcgaag ggcacccgct ggaggctcga
     3181 gaacgcgacg ctttgcacgc gtgactgagc tttggccggt ggacccgccg ccgttcattg
     3241 ccggttcacg agctcgcgca gcttttcgac gccgtcgatt tcgcccatga cgatgagctg
     3301 catgcccgcg tgaagcgcgt gatccggtga cggattgtaa acgtagcctt ggtccgtgct
     3361 gtgcagcgcc acgacgagca gctgagtctc ctgacgaatc ggcacctcgc gcagcgtctt
     3421 gccgacgtaa cgcgagtcga ccgggagctc gacctcctcg aagcgcaggt ttttggtgac
     3481 gcgcagcatg ttgtccagaa agctcgtgac tttggggcgc acgagctcgc tcaccatgcg
     3541 ctgtccgccc atgcggtgga ggctaatggt ctggtcggcg cccgcgcggc ggatcttcgc
     3601 ttcgttctcg acttcgatca ccttggagac gatgcgcgcc ttggggttga gcgcgcgcgc
     3661 cgacatcacg atgaagaggt tgtccggatc ttccgtgagc gccgccatca cgccttccgc
     3721 gcgatcgacg cgcgcggcga ggagcgtgtg gtcgtcggtc gcgtcgccga tcacgtagag
     3781 gaggttgcct ccgatctctt cgttcatgcg ccggacggtt tcctcgtccc ggtcgaccag
     3841 cacgaactcg cgaccgatcg ccgcgagctc ctcgacgatg tagcgcccgg tgcgcccgcc
     3901 gcccgccacc accaaatgcc cctcgagtgc atcgattcgc ttttgcatgc gccgtctccg
     3961 aaacgtctcc ccgattaccc cttcgacgag gatcgcggtg agcgtcgatt gaaagaacgc
     4021 aatcgtgccg atgcccgtca cgatcaaaag gctcgtgacg aggcgcatgt ccgggcgcac
     4081 cgccatgccc ggaagctcgg caaagcccac actcgccgaa gtgatgaggg cgaagtacac
     4141 tgtgttgaag agcgagtatt tcccgcccgc caagagccac agcacgacgc cgcccatgaa
     4201 gatcgtcgac gcaaagaccg
//
LOCUS       DATIML010000475         1909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_384602, whole genome shotgun sequence.
ACCESSION   DATIML010000475 DATIML010000000
VERSION     DATIML010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384602"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1168)
                     /locus_tag="VLJ38_08275"
     CDS             complement(<1..1168)
                     /locus_tag="VLJ38_08275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU39549.1"
                     /translation="MRVVLSLFAVAFAAGCGKGADGAAPAVRLEPLASAQPALEIPLS
                     PIAQRHERDRVTLDGAYHALAPVAADGKPRVYARALRAWIFAQPSLGAERLGYLRAGS
                     SSPTTARPISGEGCPGGFYPVEPQGFVCVGATATLDARDPVVTLSGPHPADFSRKLPF
                     IYGTVRNPGPIYARLPPSAELALAEPDLKERMPAWLAAGGEIGAAYGQELWLGATGTP
                     VDPAAAWAAHQSDPAPDLLLHGGIVRLTETGTDAAAELVVGKMRPKVGYSFLATELFE
                     GRRYGLATDLSVLPTDRLRPIRGSDFHGIEIGRDVKLPFAFVRREGAHFWRFVRQGKR
                     LEDDGEAPFRAAIALTGKRQFFHGRLHDETTDGRWLSDQDASRVDPARRMPAWGK"
     gene            1307..>1909
                     /locus_tag="VLJ38_08280"
     CDS             1307..>1909
                     /locus_tag="VLJ38_08280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39550.1"
                     /translation="MLERRGFEPPFLAGLLFAALGVVPLSSSGQLTRLRVLGLVILGA
                     ASMLLLKRGSPRTRARSLAGLATHPSRPEERGVALELDGDALPPTYRAVMVFGDGERR
                     TLLERAEPAGVLEDAVLLARELDVPLVAGWGIDDGTRDALLGPGDQAHRLESGATITF
                     DSPPFAGQRNAAWTTLWASAFVVVATILMSESARAKVTPSA"
BASE COUNT          297 a          654 c          653 g          305 t
ORIGIN      
        1 tcttgcccca tgcgggcatg cgccgcgcgg gatcgacgcg tgacgcatct tgatcgctga
       61 gccagcggcc gtcggtggtc tcgtcgtgca ggcggccgtg gaaaaactgc cgtttgcccg
      121 tgagcgcaat cgccgcccgg aacggcgcct cgccgtcgtc ctcgagacgc ttgccctgcc
      181 gcacgaagcg ccagaagtgc gcgccttcgc ggcgcacgaa cgcgaacggg agctttacgt
      241 cgcgaccaat ctcgatgccg tgaaaatcgg agccgcggat cggacgcagg cgatcggtcg
      301 ggagcacgct gagatcggtc gcgaggccat agcggcgtcc ctcgaagagc tccgtcgcga
      361 ggaacgaata gccgaccttc ggccgcatct tgccgacgac cagctcggcc gcagcgtccg
      421 tgcctgtttc ggtcaagcgt acgattccgc catgcagcaa gaggtcgggg gcgggatcgc
      481 tctggtgggc tgcccaggcg gccgccggat cgacgggcgt ccccgtcgcc ccgagccaga
      541 gctcctggcc atacgccgct ccaatttcgc cgccagcggc caaccacgct ggcatccgct
      601 ccttcagatc gggctctgct aaagcgagct ccgccgaggg tggcaggcgt gcatagatgg
      661 gtcctgggtt tcgcaccgtg ccgtagatga atggcaattt ccgactaaaa tccgctgggt
      721 gcggcccgct caacgtgacg acggggtcgc gcgcgtcgag cgtcgccgtc gcgccgacgc
      781 agacgaagcc ctgtggctcg acggggtaaa agccccccgg gcaaccctcc cccgagatgg
      841 gccgagccgt tgtcggcgag gagctcccgg cgcgcaaata cccgagccgc tcagcgccaa
      901 gcgacggttg cgcgaagatc cacgctcgaa gcgctctcgc atacacgcgc ggcttcccgt
      961 cggccgcgac cggcgcgagc gcatgatagg cgccgtccag ggtcacgcga tcccgctcgt
     1021 gccgctgggc gatcggtgaa agcggtatct ccagcgcagg ctgcgcgctc gcgagcggct
     1081 cgagccgaac agcgggagcg gctccgtccg cgcccttgcc gcacccggcg gcgaaggcga
     1141 ccgcaaaaag gcttaatacg acgcgcaagg ccacggcgac atatcgtgat cgtttgcaat
     1201 actggccaag aaagcgccgc atgcgcgaaa atctggtggt agggtccgcg ccattccgcg
     1261 gagcttccgg atgctgacgc tcgatccaaa ggagcggccc ctagccgtgc tcgagcgacg
     1321 aggcttcgag ccaccgttct tggccggcct gctgttcgca gcgctcggtg tcgtaccgct
     1381 ttcgtcgtct ggccagctca ctcgcctgcg cgttttgggg ttggtgatcc tcggggcggc
     1441 atccatgttg ctcctcaagc gcggcagtcc acgcacgcgc gcgcgttccc tcgccggcct
     1501 cgcgactcat ccatcacgtc ccgaggagcg cggcgtcgcg ctcgagctcg acggcgatgc
     1561 gctgccccct acctatcgag ccgtgatggt tttcggagat ggcgagcgcc ggacgttgct
     1621 cgagcgcgcc gaaccggcgg gggtgctcga agatgccgtc ttgctcgctc gggagctcga
     1681 cgtgccgctc gtcgccggct gggggatcga cgacggcacg agagacgcgc tcctcggtcc
     1741 cggtgaccaa gcgcaccggc tcgagagcgg cgcgaccatc actttcgatt cgccgccgtt
     1801 cgcgggccag cgcaatgccg cgtggacgac gctttgggcg tcggcgttcg tcgtggtggc
     1861 cacgatcctg atgtcggagt cggcgcgagc gaaagtgacg ccgagcgcg
//
LOCUS       DATIML010000476         1852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1829905, whole genome shotgun sequence.
ACCESSION   DATIML010000476 DATIML010000000
VERSION     DATIML010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1829905"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /gene="hisS"
                     /locus_tag="VLJ38_08285"
     CDS             complement(<1..721)
                     /gene="hisS"
                     /locus_tag="VLJ38_08285"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HSU39551.1"
                     /translation="MTLRAVKGMNDILPDEIGRWHALEAVLRRTFELAGYREIRTPVV
                     EPLELFVRSIGEATEIVEKQMFVLKREDESLALRPEGTAGVARAYVASTLYAREPVSR
                     LYYLGPMFRAERPQRGRYRQFWQAGVEIYGDPGPGCDAELIDLLVRMLSELGVQNLRV
                     LVNSLGGAETRARYRDALGAFLRPKAAELSEHARRRLDDNPLRILDSKNPQDQAAVAG
                     APSILELLTPEDRAHFDGVTQA"
     gene            789..1208
                     /gene="ruvX"
                     /locus_tag="VLJ38_08290"
     CDS             789..1208
                     /gene="ruvX"
                     /locus_tag="VLJ38_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HSU39552.1"
                     /translation="MRALGVDVGKVRVGVAVADELGLLAHPRDHLDGRDPRRAVEALA
                     ALAAAEKIELFVVGLPRSLDGQEGPAARRARRFGRALSARTGVPIEFYDEWLSTREAR
                     GRLREQGVDDRAARERIDSAAAAVVLQSWLDGRRVPT"
     gene            1295..>1852
                     /locus_tag="VLJ38_08295"
     CDS             1295..>1852
                     /locus_tag="VLJ38_08295"
                     /inference="COORDINATES: protein motif:HMM:NF014656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HSU39553.1"
                     /translation="MTSRPKPQRRALWFAVAGTFGVLALIAAFVSWARGAGPGRGARS
                     LFELAPGVATGELAERLHEAGLVRSATAVAWYLRLTGSKVVPGRHLLRDDLSPRELTQ
                     RLTRSPARLHARVTIPEGYNHQQIAARLAELEICPAADFVAAVFNPELLRELHLRGPS
                     SEGFLFPATYELAVDSDPAAVVRTLV"
BASE COUNT          269 a          641 c          663 g          279 t
ORIGIN      
        1 gcgcttgcgt cacgccgtcg aagtgcgcgc ggtcttcggg cgtgagcagc tcgaggatcg
       61 agggtgcccc cgcgacggca gcttggtcct gaggattttt ggagtccaaa atgcgcaacg
      121 ggttgtcgtc gaggcggcgg cgcgcatgct cgctcagctc ggccgccttg gggcgtagaa
      181 atgcgccgag cgcatcgcga tagcgggcgc gcgtctcggc gccgccgagc gaattgacga
      241 gcacgcgcag gttttggacg ccgagctcgg acagcatgcg gacgagcaga tcgatgagct
      301 cggcgtcgca gccggggccg gggtcgccgt agatttctac gcccgcctgc cagaactggc
      361 ggtagcggcc gcgctgcggg cgctcggcgc gaaacatggg cccgaggtaa taaagccggc
      421 tcaccggctc gcgcgcgtag agggtgctcg ccacgtacgc gcgcgccacg cccgctgtgc
      481 cctccgggcg aagcgcgagc gactcgtcct cccgcttcaa aacgaacatc tgcttttcga
      541 cgatctcggt cgcttccccg atcgagcgca cgaagagctc gagcggctcg accacgggtg
      601 tgcggatttc ccgatagccc gcgagctcga acgtacgccg gagcaccgcc tcgagcgcgt
      661 gccaacgccc gatctcgtcc gggaggatgt cgttcatgcc tttaacggcg cggagggtca
      721 tgggcgtcgg gaaaagatcg aggccgctcg ttagcagctc cggagagaag gtgctatcca
      781 catccggcgt gcgagcgttg ggcgtcgatg tcggcaaggt acgcgtcggc gtggcggtgg
      841 cggacgagct cggcttactg gcacacccgc gtgaccatct cgacggccgg gatccccgcc
      901 gggcggtcga ggcgctcgcc gcgctcgcgg cggccgaaaa aatcgagctc ttcgtggtcg
      961 gattgccccg ctcgctcgac gggcaggagg gaccggcggc caggcgcgcc cggcgtttcg
     1021 gccgagcgct cagcgcgcgg acgggcgtac cgatcgagtt ttacgacgag tggctctcga
     1081 cacgcgaggc gcgcggccgc ttgcgcgaac agggggtcga cgatcgcgcc gcacgcgagc
     1141 gcatcgacag tgcggcggcg gcggtcgtcc tccagtcgtg gctcgacggg cggcgtgtgc
     1201 ccacgtgaac caggctcgcc cgcgcaggcg gcgaacacgc cggagcggcg cgcccaagag
     1261 tacgcggcgc gcgcgggcac ccgagccgca acgcgtgacc tcgcgcccca agccgcagcg
     1321 ccgtgcgctg tggttcgccg tcgcgggaac cttcggcgta ctcgcgctca tcgccgcgtt
     1381 cgtgagttgg gcccgcggcg ccggacccgg gcgcggcgcg cggagcctgt tcgagctcgc
     1441 tcccggagtg gcgacgggcg agctcgccga gcgactgcac gaagctgggc tcgtccgcag
     1501 cgccacggcc gtcgcctggt acctgcggct cacgggttcc aaggtcgtcc cgggccggca
     1561 tctcttgcgg gacgatttga gcccgcgtga gctcacgcaa cggctgacgc gctcaccggc
     1621 tcgcctccac gcgcgcgtga cgatccccga gggttacaac caccaacaaa tcgcagctcg
     1681 cctcgccgag ctcgagatct gccccgcggc tgatttcgtc gccgccgtct tcaaccctga
     1741 actgctccgc gagctgcatc tgcgcggccc gagcagcgag ggctttctct tccccgccac
     1801 gtacgagctc gccgtcgaca gcgatccggc ggcggtcgtg cgtactctcg ta
//
LOCUS       DATIML010000477         3058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2693382, whole genome shotgun sequence.
ACCESSION   DATIML010000477 DATIML010000000
VERSION     DATIML010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2693382"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /locus_tag="VLJ38_08300"
     CDS             complement(<1..670)
                     /locus_tag="VLJ38_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HSU39554.1"
                     /translation="MIFTQPIFALFFAVTAGVHWWLSDARARKLWLLAASYVFYGYWD
                     YRFVALIVLCTVFDYAVGLLLGRTEAPRARRSLIAASLCMNLGLLGFFKYYGFFAESL
                     VNALAALGVQANLRVLHVVLPAGISFFTFQTMSYTIDVYRKKLEPQRDFLDFALFVGF
                     FPQLVSGPIVRATEFLPQLRAPRAFASVDARRALMLFAVGYFKKACLADNIAGAIDPL
                     FANPS"
     gene            complement(667..1527)
                     /locus_tag="VLJ38_08305"
     CDS             complement(667..1527)
                     /locus_tag="VLJ38_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39555.1"
                     /translation="MLFVGPSYVRDGVKPQVFEREAKQLGSELRACKYGLSSLKGYEL
                     RRDLEVLLRAPWQKLELVVIDITLGTGLSFEEDNWFKARVVDWHTKDSLPWLYAFYRQ
                     EGLRGLGLARTLAPHFAHVALNYLGVGRGVSLLERASLLDRYRSTPRHVRQDYEPRTP
                     SVRATRKLHGPEYPGQVQALLAAKLQARDEHDEISDAWARDLERVVRDHGYEVAFLLA
                     PVLRLKLPPQATRAGAPPLSILDFDDPQEYPELYASDRRGYTNHLNDLGAADYSRLLA
                     REIVRHKLAR"
     gene            complement(1929..2186)
                     /locus_tag="VLJ38_08310"
     CDS             complement(1929..2186)
                     /locus_tag="VLJ38_08310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39556.1"
                     /translation="MEEELAIGAGGNKPREKPARPEVGPVLHANDAGLSEARRTTTEA
                     RRTTAASLRAGLATAIIAAFGDQPFWGWRLTELGAGTTLRF"
     gene            2242..>3058
                     /locus_tag="VLJ38_08315"
     CDS             2242..>3058
                     /locus_tag="VLJ38_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU39557.1"
                     /translation="MSELPPLLACLPPEGSSPDAVLEGFLRYTSELGLTLYPHQEEAI
                     LAVMSGSHVIVHTPTGSGKSLIATAVHFKALAEGRRSFYTCPIKALVSEKFFALCREL
                     GPDRVGMMTGDATVNRDAKIICCTAEILANIALGEGEHADVDYVVMDEFHYFSDKERG
                     VAWQVPLLTLPQSRFVLMSATLGDVSAFEALLKRQTGVDVVTVRSGKRPVPLEFEYQE
                     KLLQEATHTLVEKGRAPVYVVSFTQRGAAEAAQSLLSLDYCTKEEKKELAEAMR"
BASE COUNT          559 a          986 c         1016 g          497 t
ORIGIN      
        1 ccgaaggatt cgcgaagagg gggtcgatgg cgccggcgat gttgtccgcc agacacgcct
       61 tcttgaagta acccactgca aacagcatga gcgcgcgccg cgcgtcgacg ctggcgaacg
      121 cgcgcggcgc cctgagctgc ggcaggaact cagtcgcacg cacgatcggc cccgacacga
      181 gttgcggaaa aaacccgacg aacagcgcga aatccaaaaa atcacgctgc ggttcgagct
      241 tctttctgta gacgtcgatc gtgtagctca tcgtctgaaa ggtgaagaag ctgatccccg
      301 cgggcaggac tacgtgcaag acgcgaagat tggcttggac gccgagcgcg gcgagcgcgt
      361 tgacgagcga ctccgcgaag aagccgtagt acttgaagaa gccgagcagt cccaggttca
      421 tacacaagct cgccgcgatc aaactgcggc gagcgcgcgg cgcttcggta cggccgagca
      481 gcagccccac ggcgtagtcg aagacggtgc agagcacgat cagcgcgacg aagcgatagt
      541 cccagtagcc gtaaaagacg tagcttgcgg cgagtagcca cagcttgcgc gcgcgcgcgt
      601 ccgagagcca ccaatgcacg cccgcggtca ccgcgaagaa cagcgcgaag atcggctggg
      661 tgaagatcat cgggcgagct tgtgccgcac gatttcgcgc gcgagcaggc gcgagtagtc
      721 tgcggcgccg agatcgttca ggtggttcgt gtatccgcgg cggtcgcttg cgtagagctc
      781 cgggtactcc tgcggatcgt cgaagtcgag gatcgacaga gggggcgccc cggcccgtgt
      841 cgcttgcggc ggcagcttga gcctgagaac gggcgcgagc aggaaggcga cctcgtagcc
      901 gtggtcacgg acgacgcgct cgagatcgcg cgcccatgcg tccgagatct cgtcgtgttc
      961 gtcgcgtgct tggagcttgg cagcgaggag cgcctgcact tggccgggat actcggggcc
     1021 gtggagtttc cgcgtggcgc ggacggacgg agtgcgcggc tcgtagtcct ggcggacatg
     1081 acgcggggtc gagcggtacc gatcgagcag gctcgcccgt tcgagcagcg agacgccgcg
     1141 cccgacgccg aggtagttga gggcgacgtg cgcaaagtgc ggtgcgagcg tgcgtgcgag
     1201 cccaagcccg cggagtccct cctgccggta gaaggcgtag agccacggca ggctgtcctt
     1261 ggtgtgccag tcgaccacgc gtgctttgaa ccaattgtcc tcctcgaacg acaagccggt
     1321 cccgagggtg atgtcgatga cgacgagctc gagcttctgc cacggcgcac ggagcaggac
     1381 ctcgaggtca cgccggagct cgtagccttt aagcgaagag agcccgtatt tgcaggctcg
     1441 gagctcggaa ccgagctgct tcgcctcgcg ctcgaaaacc tgcggcttca ccccgtcgcg
     1501 cacgtagctc gggccgacga aaagcacgtt acacgatcga accgacctga gcgtcgcgtc
     1561 gaacgcctgc gagtcccggg gtactgaggt gtagagccca gtcgcgatcg gcgcgaaacc
     1621 acagaggaag tagatggctc cccgaaccca accaagcata gagctgcgag tctcttcgca
     1681 cgatcaggac acagcgacaa gcctgagccg gcgctcgacg cccggcgtga cgagcggccc
     1741 tgcgatcgtt ccgccttcgc ttcgagcacg aaggtccgtc acgtcgtggc ccagctctcg
     1801 acgatctctg cggcgggcac cgctccgttt tcgcgagcta cctcgttcgc gaacgaccgc
     1861 gcccgttctc gtcgctcgtt cttcagcact tcatcgacgg cggtcgccaa acgcgcttcc
     1921 gtgagcgcct agaagcgcag cgtggtgccg gcgccgagct cggtgagtcg ccagccccag
     1981 aagggctgat cgccgaacgc agcgatgatc gcggtggcaa ggccggcccg cagggacgcc
     2041 gccgtcgtgc gccgcgcctc cgtggtcgtg cgccgcgcct ccgaaagtcc tgcgtcgttt
     2101 gcgtgcagaa ccggcccaac ctccggcctc gccggctttt ctcgtggctt gttcccgccc
     2161 gcgccgatcg cgagctcttc ttccaagact gccgaactcg agactagcgt ccgctgccgg
     2221 ttcgtgacat ggcgcgcgcc gatgtccgag ttgccgccat tgctcgcttg cctgccgccg
     2281 gaaggctcga gccccgatgc ggtactcgag ggttttctgc gttacacgag cgagctcggc
     2341 ctcacgctct atccgcatca ggaggaggcg atcctggccg tcatgagcgg cagccacgtc
     2401 atcgttcaca cgccgaccgg ctccggtaaa tctttgatcg caacggcggt gcacttcaag
     2461 gcgctcgccg agggccgtcg ctctttttat acgtgcccga tcaaggcgct cgtgagcgag
     2521 aaattcttcg cgctgtgccg cgagctcggc cccgaccgcg tcggcatgat gaccggcgat
     2581 gccacggtca atcgcgacgc caagatcatt tgctgcacgg cggaaattct cgccaacatc
     2641 gcgctcgggg aaggggagca cgccgacgtg gactacgtcg tcatggacga gttccactac
     2701 ttttccgaca aggagcgcgg cgtcgcctgg caggtgccgc tgctcacttt gccgcagagc
     2761 cgcttcgtct tgatgagtgc gacgctcggc gacgtgagcg cgttcgaggc actgctcaag
     2821 cggcaaacgg gcgtcgacgt cgtcaccgtc cgctcgggca aacgccccgt gccgctggag
     2881 ttcgaatacc aagagaagct cctgcaggag gcgacgcaca cgctcgtcga aaagggccgc
     2941 gcgcccgtct acgtcgtgag tttcacgcag cggggcgccg ccgaagccgc gcagagcctg
     3001 ctcagcctcg attactgcac gaaggaagaa aaaaaagagc tcgccgaggc gatgcgcg
//
LOCUS       DATIML010000478         3643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1830103, whole genome shotgun sequence.
ACCESSION   DATIML010000478 DATIML010000000
VERSION     DATIML010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1830103"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VLJ38_08320"
     CDS             complement(<1..314)
                     /locus_tag="VLJ38_08320"
                     /inference="COORDINATES: protein motif:HMM:NF013804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein"
                     /protein_id="HSU39558.1"
                     /translation="MASPKDKKHAKDGGDRLVSKNRRAFFDYEVGDVFEAGLVLIGSE
                     VRSLRENSADLSDAWVDISSRGEAWVKGLRIPPLKHAAFGHEERRPRKLLLHREQIDR
                     LRG"
     gene            627..1940
                     /locus_tag="VLJ38_08325"
     CDS             627..1940
                     /locus_tag="VLJ38_08325"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39559.1"
                     /translation="MNAQTAESSEPAVLEPGTVIAGRYRVLGFIGAGGMGTVYRAEHV
                     HMRKTVALKLLHAEFLAVDEVVQRFEREAIAAGRIEHPNVVAASDFGKLEDGSFYLVL
                     EYVDGTSLRALLANGALPLARTLHVARQTALALGAAHAAGVVHRDLKPDNVMLVSEPG
                     GGDRVKVLDFGIARVAPPGQNRDTTKLTRVGVVMGTIAYMSPEQAVGQAVDERADLYS
                     LGVMLYEMIAGVVPFDAELPSQVLARQLVEKPPPLPPSTPPALAELVYDLMEKKPEDR
                     PASAQVVLDRLVPLTPTPSGRVPEPKPRVPKRAWYVAGGVALLLAVLIGLFGGKHEET
                     AAPSAEPSASVTAPESAASAPKAETSTPVTTAAPSASIAPTAEGSEPSAAPLTSAATT
                     KSSPKDTKSTKPKAGGSPASRSTATPKRRTGPGGIYIPPPSQWFK"
     gene            2232..>3643
                     /locus_tag="VLJ38_08330"
     CDS             2232..>3643
                     /locus_tag="VLJ38_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HSU39560.1"
                     /translation="MLRTVLEGAETHNLKGVDLELVPGEVVAITGISGAGKSSLAIDT
                     LYAEGQRRFVESFSPYARQFLERLERPPTRRLEPIPAGIAVDRRAPVKSSRSTVASMA
                     DIQPYLAALFLREARPVCPEHGAEADFLDPRTAAERVQAALGSERATLTYALPVPDKE
                     RYLEVREALVREGYRRVFERGETIDLDELAPSRATKAKVLEVVLDRLLPSRDGARLAQ
                     SIEAGWSRADGLVSVHGESRRVSVRRGHGCPDCGRALEPPRSGLFSYESALGACAECR
                     GFGRTLGIDVPKVLPDHSLTLAGGVIRPWRGRSTRWERSELVKLCKRHKIPTDLAWAE
                     LAAAQREMVLNGDGSWDKGLFPGVLGWFRWLETKAYKLHVRVLLARYRSYDVCRVCDG
                     RRLNATALAYRVGGKSLAEWNALEIATARALVAELVVTTGQGELARSELLHRLSYLER
                     VGLGYLTLDRQARTLSGGEA"
BASE COUNT          562 a         1236 c         1282 g          563 t
ORIGIN      
        1 ccgcgcaggc gatcgatctg ctcgcggtgg agtagcagct tgcgcgggcg ccgctcctcg
       61 tgcccgaacg cggcgtgctt gagcggcggg atgcgtagcc ctttgaccca ggcttccccg
      121 cggctgctga tatcgaccca ggcgtcggag agatcggcgg agttctcgcg cagcgaccgt
      181 acttcactgc cgatgagtac gagccccgcc tcgaatacat cgcccacttc gtagtcgaag
      241 aacgcacgtc ggttcttgga gacgaggcga tcgccgccgt ccttggcgtg ttttttgtct
      301 ttgggcgaag ccatcagcgg ggccgagtca tagccgagaa cacggcgccc gccgaatctg
      361 cccgctggaa ctctctcgga gtcttggagg aacagatcac gatcgccatg ggagacgacg
      421 agccaagcga gtgctctggc gcggccaacg gcggctgctt ttccgagcgg aattgacgca
      481 gggcgccgca agcaagctct tcggggccgt aggcgcgcag ccgaagggta agacacggga
      541 agaatccgaa tctccggcag gggtgctagc cttggctcgt ttgctcgcgt ccacgggggc
      601 ggcgagccgg gtcggaaccg cgacgcatga acgctcagac cgccgaatcc agcgagcctg
      661 ccgtcctcga gccggggacg gtcatcgccg gccggtatcg cgtgctcggg ttcatcggcg
      721 cagggggcat ggggacggtg tatcgcgccg agcacgtcca catgcgcaag accgtggcgc
      781 tgaagctcct gcacgcggag tttctggccg tggacgaggt cgtccagcgc ttcgagcgcg
      841 aggcgatcgc cgcggggcgc atcgagcacc cgaacgtggt cgcggcgagc gatttcggca
      901 agctcgagga tggctcgttt tacctcgtgc tcgagtacgt cgacggcacg agcttgcgcg
      961 cgctgctggc gaacggcgcg ctcccgctcg cccgcacgct gcacgtcgcg cgccagacgg
     1021 cgctcgcgct cggcgccgct cacgccgcgg gcgtcgtgca tcgcgatctc aagcccgaca
     1081 acgtcatgct cgtctccgag cctggcggcg gcgatcgcgt caaggtgctc gacttcggca
     1141 tcgcgcgcgt tgcgccgccc ggtcagaacc gcgacactac gaagctcacg cgcgtcggcg
     1201 tcgtgatggg caccatcgcg tacatgtcgc ccgagcaggc cgtcggccaa gccgtcgacg
     1261 agcgcgctga tctctattcg ctcggcgtga tgctgtacga gatgatcgcg ggcgtcgtgc
     1321 ccttcgacgc cgagctgccg tcgcaagtgc tcgcgcgcca gctcgtcgaa aagcccccgc
     1381 cgctgccgcc gagcacgccg cccgcgctgg ccgagctcgt ctacgatttg atggaaaaga
     1441 agccggagga tcgtccggcg tccgcgcagg tcgtgctcga ccggctcgtg ccgctcacgc
     1501 cgacaccctc ggggcgcgtc ccggagccga agccgcgcgt gccgaaacgg gcgtggtacg
     1561 tcgcgggcgg cgtcgcgctg ctgcttgccg tgctgatcgg actcttcggc ggcaaacacg
     1621 aggagacggc ggcgccgagc gccgaaccgt ccgcttccgt cacggcaccg gagtccgcgg
     1681 cgtccgcgcc gaaagcggag acatcgacgc ccgtcacgac ggcggcgccc tccgcgagca
     1741 tcgcgccgac cgccgagggc tccgagccat ccgctgcgcc gctgacctcc gccgcgacga
     1801 ccaagtcgag cccgaaggac acgaagagca cgaagccgaa agccggcggc tcgcccgcgt
     1861 cacgctcgac cgcgacgccg aagcgccgca cgggtcccgg cggcatctac attccgccgc
     1921 cgagtcagtg gttcaagtga aacggttgca agaagcggcg cgcgagcgac tcgcaaggct
     1981 caaaatcgtc gccctcgtcg atgaactcga cggtcgtcac ggcacgccgt cgccgggatt
     2041 gcgacgggaa gtcgaccgcg cggcgaaacg cattttcaag cgcccacgac gataaagtga
     2101 cgcacggcgg cgagattgtc gtcgcgactc ccattctcgt cgaatgcacc aggggcgaag
     2161 cgttcggctg agctgaacgc cgcctcggct tgcgcttcgg gcgttccggc ttcacgttcg
     2221 gggaccctgc gatgctccgc accgtcctcg aaggagccga aactcacaat ctgaagggcg
     2281 tggacctcga gctcgtgccg ggcgaggtcg tcgccatcac cggtatttcg ggggctggca
     2341 agagcagcct ggcgatcgat acgctctacg ccgaagggca gcgccgcttc gtcgagagtt
     2401 tcagtccgta cgctcgtcag ttcctcgaac ggctcgaacg accgccaacg cgacgcctcg
     2461 agcccatacc ggcgggcatt gccgtcgatc ggcgcgcgcc cgtgaagagc tcgcgctcga
     2521 ccgtggcgtc gatggcggac attcagccgt atttggcggc actctttctg cgggaggcgc
     2581 ggcccgtgtg tccggagcac ggcgccgagg cggacttttt ggacccgcgt acggcggccg
     2641 agcgcgtgca ggcggcgctc ggcagcgaac gcgcgacgct gacctacgcg ctgcccgtgc
     2701 ccgacaagga gcgctacctc gaggtgcgcg aagcgctcgt ccgcgagggc taccggcgcg
     2761 tgttcgaacg cggcgagacg atcgacctcg acgagctcgc gccctcgcgc gcgaccaagg
     2821 ccaaagtgct cgaggtcgtg ctcgatcgct tgctgccgag ccgcgacggc gcgcgcctgg
     2881 cgcagagcat cgaagcgggt tggagtcgcg cggacgggct cgtttcagtg cacggcgaga
     2941 gccgccgcgt gagcgtgcgg cgcgggcacg gctgtcccga ttgcggccgc gcgctcgagc
     3001 cgccgcgctc cgggctcttc tcgtacgagt ccgcgctcgg cgcgtgcgcg gagtgccgcg
     3061 gcttcggtcg cacgctcggc atcgacgtgc cgaaggtgct gcccgatcac tcgctcacgc
     3121 tcgcgggcgg cgtgatccgg ccgtggcgtg gccgctcgac acgctgggag cgcagcgagc
     3181 tcgttaagtt gtgtaaacgc cacaaaatcc cgacggacct ggcctgggcc gagctggcgg
     3241 ccgcgcagcg ggaaatggtc ttgaacggcg atggcagctg ggacaagggg ctatttcccg
     3301 gcgtgctcgg ctggtttcgc tggctcgaga ccaaggcgta caagctgcac gtgcgcgtct
     3361 tgctcgcgcg ctaccgctct tacgacgtgt gtcgtgtttg cgacggccgg cgcttgaacg
     3421 cgacggcgct cgcgtatcgc gtgggcggca agagcctcgc ggagtggaac gcgctcgaaa
     3481 tcgcgaccgc gcgggcgctc gtcgccgagc tggtggtgac gaccggccaa ggcgagctcg
     3541 cgcggagcga gctcttgcac cggctctcgt acctcgagcg cgtcggactc ggttatctga
     3601 cgctcgatcg tcaggcgcgc acgctgtcgg gcggcgaggc gca
//
LOCUS       DATIML010000479         1755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2404174, whole genome shotgun sequence.
ACCESSION   DATIML010000479 DATIML010000000
VERSION     DATIML010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2404174"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /locus_tag="VLJ38_08335"
     CDS             complement(<1..477)
                     /locus_tag="VLJ38_08335"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39561.1"
                     /translation="MEPAILYVDDERANLDLFVRSFDEQFRVLVADSGPRALELLEAG
                     ESVGVLVSDQRMSPMTGIELLTRAAERWPSIPRILLTAYSDRELLFQAIELGKVHDYV
                     LKPWHAEELGLRLRAALELFLREQALVRAAAERDAAVFEHPHQAPLGTVFGIGVLQR"
     gene            561..>1755
                     /locus_tag="VLJ38_08340"
     CDS             561..>1755
                     /locus_tag="VLJ38_08340"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSU39562.1"
                     /translation="MSHLLRRGVLAALFAACWCSPYALPFRAAHTTIATGAGRVVPVA
                     SAFGKAAPAVELGWYAALALSACWLLALIWALSEELPLWARRSERGARWVWLLSAVAG
                     ALVWVLNRTLWPDVCMFCAQLNTSSAAVKVHHNLLVQTGTALLVPPVGLALGRFFKRP
                     LDTAKLPFSLWLIAIAGVLFVTPPYLVLAKAGQFTLLALAIVALCLRELPRIEERLAL
                     GKWRFRALAFTLGVAPIAPARPLVEHFLAERGARALPLLNAYAAVLTLAGGLAFVVAC
                     LSTADALAWILRGARSLRTRLLVFGLCCAALAFLLGRVRVPVHVMGEGAALGELVSLM
                     TKLVGTLTIVFSFSLVLSRELAQSLERSARAIVEISHGNLDIELREVGHDEVAAVAAS
                     VNRMLS"
BASE COUNT          225 a          609 c          587 g          334 t
ORIGIN      
        1 tcgctgcagc acaccgattc cgaatacggt gccgagcggc gcctggtgcg ggtgctcaaa
       61 taccgcggcg tcgcgttccg ccgcggcccg cacgagcgcc tgctcgcgca agaagagctc
      121 gagcgccgcg cgcagccgga gcccgagctc ttcggcatgc cacggcttga gcacgtaatc
      181 gtgcaccttg ccgagctcga ttgcctgaaa caagagctcg cggtccgagt acgccgtgag
      241 cagaatccgc ggaatggacg gccagcgctc ggcggcgcgc gtgagtagct cgatgcccgt
      301 catgggtgac atccgctggt cggaaacgag cacgccgacg gattcaccgg cttcgagcag
      361 ctcgagtgcg cgcggaccgc tgtccgcgac gagcacgcgg aattgttcgt cgaaggagcg
      421 cacgaacagg tctaggttcg cgcgttcgtc gtccacgtag aggatcgccg gctccacgcc
      481 gcgagcttag cccgacgccc cggcccgagc gcgtttgcag tgcaaatctg cgcggggcct
      541 tgtaatctcg agtgcgcggc atgagccatc tgctccggcg cggcgtgctc gctgccttgt
      601 tcgcggcctg ctggtgctcg ccgtatgcgc tgccttttcg cgccgcgcat acgaccatcg
      661 ccaccggcgc agggcgggtc gtaccggtgg cctcggcgtt cggcaaagca gcacctgccg
      721 tcgagcttgg ctggtacgcg gcgctcgccc tgtcggcgtg ctggttgctc gcgctgattt
      781 gggcgttgtc ggaggagctt ccgctctggg cccgtcgctc ggaacgaggg gctcgctggg
      841 tctggctctt gtcggccgtt gccggcgcgc tcgtctgggt tttgaaccgc acgctttggc
      901 cggacgtctg tatgttctgc gcgcaactga acacgtcttc ggcggccgtg aaggtgcacc
      961 ataatctgtt ggtgcagacc ggtacggcgc tgctcgtacc acccgtgggc ctcgccctgg
     1021 gccgattctt caagcgcccg ctcgacacgg ccaagcttcc cttctcgctc tggctcatcg
     1081 ccatcgccgg ggtgctcttc gtcacccctc cctatctcgt gctcgccaaa gcggggcagt
     1141 tcacgctgct cgccctcgcc atcgtcgcgc tctgcctgcg cgagctaccg cgcatcgagg
     1201 aacgccttgc gctcggcaag tggcgctttc gcgcgctcgc cttcaccctc ggcgtcgcac
     1261 cgatcgcgcc cgcgcgaccg ctggtcgagc attttctcgc ggagcgcggc gcgcgggctc
     1321 tgccgctgct caatgcctac gccgccgtgc tcacgctcgc cggcgggctc gcgttcgtgg
     1381 tcgcgtgtct gagtacggcg gacgccctcg cctggatctt gcgcggggcg cgctcgctcc
     1441 gcacgcggct cttggtcttc gggctgtgct gcgcagcact cgcattccta ctcggccgcg
     1501 tgcgcgtgcc cgtacacgtc atgggcgagg gcgcggcact cggagagctc gtgagcctca
     1561 tgacgaagct cgtcggcacg ctcacgatcg tgttttcgtt ctcgctcgtg ctgtcgcgtg
     1621 agctcgcgca gtccctcgag cgttcggcgc gggcgatcgt cgagatcagc cacggcaacc
     1681 tcgacataga gctccgcgaa gtggggcacg acgaagtggc ggccgtggca gccagcgtca
     1741 atcgcatgct gtctg
//
LOCUS       DATIML010000480         1563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_962291, whole genome shotgun sequence.
ACCESSION   DATIML010000480 DATIML010000000
VERSION     DATIML010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_962291"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..815
                     /locus_tag="VLJ38_08345"
     CDS             <1..815
                     /locus_tag="VLJ38_08345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39563.1"
                     /translation="RFVHSGDNARQMVIHAATEPAPSLATIVPDLPPFVVELVDRALK
                     FARSERWASAAEMRARVLEAHRELFRADPSASELCALLERTALTVQTSPTQPAACSES
                     QERESGERVRRVVQTTASTPFATRGNAAVATPKAPAWPLVLAGALAVLGMASYWVSRR
                     DSGQPAAGTPSASSAALALAEHAGPVGPGTVSPLAPAAKPAPIAAPPQTAASSTDAAA
                     PAASAAVTRRASGSVAARKVAPPIRSAVTSAGSPEPAPAPTLTDNPLKLELQ"
     gene            812..>1563
                     /locus_tag="VLJ38_08350"
     CDS             812..>1563
                     /locus_tag="VLJ38_08350"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HSU39564.1"
                     /translation="MTRRAQDRRLRRVWLTLAAFAVTPLAMAESSANVSGAPSPAGAL
                     PPADRAPPLAEALTGEPKQDYEAALLLYKSGDFVGAERRFSSAYAATRDVRLLWNAAA
                     CEQGLRHYAKAIALVRRYLSSRSPLITEAAESSARAFLNAAIPLTARLVLEVNPSGSS
                     ASLDDEPLGTLPLEPDTRVDFGTHRLLVRKPEFSEHREDFTVTSSADVHVQVTLDPIV
                     HQGRLVVHAGKADSIALDGRFRGLGMFEAAVP"
BASE COUNT          227 a          578 c          530 g          228 t
ORIGIN      
        1 cacgcttcgt gcactcaggc gacaacgcca ggcagatggt gatccacgcg gcgaccgagc
       61 ccgccccttc gctcgcgacc atcgtgccgg acctgccgcc attcgtggtc gagctcgtcg
      121 atcgggcgct caagttcgcg cgctcggagc gctgggcctc ggcggccgag atgcgggccc
      181 gagtgctcga agcacatcgc gagctgtttc gagccgatcc gtcggcgtcc gagctgtgcg
      241 cgctcctcga acggaccgcc ctcaccgtgc agacttcacc gacgcagccg gctgcgtgca
      301 gcgaatcgca agagcgcgag tccggggagc gcgttcgacg ggtggtgcag accaccgcgt
      361 ccacgccgtt cgcgacgcgt ggcaacgccg ccgtcgccac cccgaaggct cccgcctggc
      421 cgctcgtcct cgcgggggcg ttggcggttc tcggcatggc tagctattgg gtgagccggc
      481 gcgactcggg gcaaccggca gccgggactc cgtccgcatc gagcgccgcg ctcgccctcg
      541 cggagcacgc gggacccgta ggcccaggca ccgtctcccc tctggcgccc gccgccaagc
      601 cggctccgat cgcggctcca ccgcagacgg ctgcttcgag caccgacgct gccgcgcccg
      661 cggcgagcgc cgcagtcacc cgccgcgcga gcggctccgt agcggcgcgc aaagtggcgc
      721 ctcccattcg atcagccgtc accagcgcgg ggtcgcccga accggcgccc gcgccgacac
      781 ttaccgacaa tccgctgaag ctcgagctcc aatgactcgg cgcgcgcaag accgacgact
      841 gcgccgtgtc tggctgacgc ttgccgcctt cgccgtcacg ccgctcgcca tggccgagag
      901 ctcggcgaac gtgagtggcg cgccttcgcc ggcaggcgct ctgccgccgg ccgatcgcgc
      961 gcctcccctc gctgaggcgc tcacgggtga gcccaagcag gactacgagg cggcgctctt
     1021 gctctataag agcggcgatt tcgtcggcgc cgagcggcgt ttctcgagcg cctatgccgc
     1081 cactcgagac gtgcggttac tttggaatgc ggccgcgtgc gagcagggcc tgcgacacta
     1141 tgcgaaggcc atcgcgctcg tgaggcgcta cttgagctcg cgctcgccgc tcatcacgga
     1201 agcggccgag agcagcgcgc gcgcgttcct caacgcggca attccgctca cggctcggct
     1261 ggtgctggaa gtgaacccgt caggcagcag tgcgagcctc gacgacgagc cgctcggcac
     1321 gctgccgctc gagccggaca cacgcgtcga cttcggcacg catcggctcc tcgtgcgaaa
     1381 gcccgagttc agcgagcacc gcgaagactt cacggtgacg agctcggccg acgttcatgt
     1441 gcaagtgacg ctcgatccga tcgtgcacca gggccggctc gtggtgcacg cgggcaaggc
     1501 ggactccatc gcgctcgacg ggcgatttcg tgggctcggc atgttcgagg ccgcggtacc
     1561 gag
//
LOCUS       DATIML010000481         2502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_676107, whole genome shotgun sequence.
ACCESSION   DATIML010000481 DATIML010000000
VERSION     DATIML010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676107"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VLJ38_08355"
     CDS             complement(<1..829)
                     /locus_tag="VLJ38_08355"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HSU39565.1"
                     /translation="MRLLYKNRRMALDLDMAETERVSAWLARVTGRSGRFELTAIPGG
                     ASPRRFYRVELDASAIVMLVPPDTPDVAFARERGRAWPFLEVRELLAAAGVRVPAVLA
                     EACDEGLLLVEDLGPTLAEHLERHPSDREALYRSAVCDLARAQSALEPLPVGSVVRLR
                     QFDAALYTTELEHFWDWAIAARNVDAPRAPFQRALALLLERLCTLPRGFTHRDYQSRN
                     LLVPAPTDTTLGWIDFQDALLGPRAYDLVALLCDSYQPFERAFVDRRLDEYANARALS
                     "
     gene            828..1487
                     /locus_tag="VLJ38_08360"
     CDS             828..1487
                     /locus_tag="VLJ38_08360"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmG family class I SAM-dependent
                     methyltransferase"
                     /protein_id="HSU39566.1"
                     /translation="MALAQLGAGWSPYLSRVVAGLASSVPPPPAFERLAAQLLDLTVS
                     WNAKMDLTAAKTAEELVDLTFADALALFGHGELRPEEAWLDVGSGSGAPGFPLALLEP
                     RLRVSLLEPMQKRVAFLRTLVGTLGVRAQVLRGRVEEVAAASTDVAISRATLPPADWL
                     REGARLARREVWVLLARETPPACSGWSVRTDFAFEWPLTGRKRRLVSFERAASSSVAA
                     R"
     gene            1677..2189
                     /locus_tag="VLJ38_08365"
     CDS             1677..2189
                     /locus_tag="VLJ38_08365"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HSU39567.1"
                     /translation="MALTAALTALADGYDVVGTPNLGFTAVGPGGLKINGTAENLATI
                     DQGDKVVFKSSLKEIKTGIALRDNHTKKYLGTDQWPDASLSVDKSAIKIPEDGKKTSG
                     TAPGKFRLHGVTRDVKVAYTADRHGSEYAVEGHFAVNIEDHKIEKPCYLGVCVDSNVK
                     VDAKFKLHAK"
     gene            2234..>2502
                     /locus_tag="VLJ38_08370"
     CDS             2234..>2502
                     /locus_tag="VLJ38_08370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39568.1"
                     /translation="MRKYTAKCQAWGVWRRVLVAALPLWCVLFTARPAHAYSWMIRHG
                     YSGCPVCHADPSGGETLTAYGRAQSDLLLRTRWDGKNPEEAEPSNA"
BASE COUNT          436 a          792 c          867 g          407 t
ORIGIN      
        1 ccgagagagc gcgggcgttc gcgtactcgt cgaggcgacg gtcgacgaac gctcgctcga
       61 agggctggta gctgtcgcac agcagggcga cgaggtcgta ggcgcgcggg ccgagcaggg
      121 cgtcctggaa gtcgatccag ccgagagtcg tgtccgtggg cgcgggcacg agtaggttgc
      181 gactttgata atcccggtgg gtgaagccgc ggggcagggt gcacagtcgt tcgaggagca
      241 atgccagcgc acgctggaac ggcgcgcgcg gtgcgtcgac gttgcgcgcg gcgatcgccc
      301 aatcccaaaa atgctcgagc tcggtcgtgt agagcgccgc gtcgaattga cgcaggcgga
      361 cgacggaacc caccggcaat ggctcgagcg cgctttgtgc ccgcgccagg tcgcaaacgg
      421 cggagcgata cagggcctcg cggtcgctcg ggtgccgttc gaggtgctcg gcgagcgttg
      481 gcccgagatc ttcgaccagg agcaggcctt cgtcgcacgc ctcggcgagc acggccggaa
      541 cgcgaacgcc agccgccgcg agtagctcgc gcacctccag aaacggccac gctcgtccgc
      601 gctcgcgcgc gaaggcgacg tccggcgtgt cgggcggaac gagcatgacg atggcgctgg
      661 cgtcgagctc gacgcgataa aagcgccgcg gtgacgcgcc gcccggaatc gccgtgagct
      721 cgaaacgccc gctccgtccc gtgacccggg cgagccacgc gctcacccgt tccgtttcgg
      781 ccatgtcgag gtcgagcgcc atgcgtcggt tcttgtagag tagccgcatg gctttggccc
      841 agcttggcgc cggctggtcg ccctatctgt cgcgcgtggt cgcggggctc gcgagctccg
      901 tgccgccgcc gccggcgttc gagcgcctcg cggcacagct gctcgatctg acggtgagct
      961 ggaacgcaaa gatggatctg acggccgcaa agacggctga agagctcgtc gatctgacgt
     1021 tcgctgacgc gctcgcgctg ttcggacacg gtgagctgcg ccccgaggaa gcgtggctcg
     1081 acgtcggcag cggcagtgga gctcccgggt tcccgctggc tctgctcgag cctcggctcc
     1141 gcgtctccct gctcgagccg atgcaaaagc gcgtcgcatt tctccgcact ttggtcggga
     1201 cgctcggcgt gcgcgcgcaa gtattgcgag gacgcgtcga agaggtcgcc gctgcgtcga
     1261 cggacgtcgc gatttcgcgt gcgacgctgc cgccagcgga ttggctgcga gaaggcgcac
     1321 gtcttgcgcg gcgcgaagtt tgggtgctgc tcgcgcgtga gacgccgccg gcgtgttccg
     1381 ggtggtcggt ccgtacggac ttcgcgttcg agtggccgct gaccggccgg aaacggcggc
     1441 tggtgtcgtt cgagcgcgcc gcgtcaagct cggtggcggc caggtaagca cgccggaaaa
     1501 atctcgtgaa gttcgaagct tgtggaggcg gaggaatcct cgggggggat gcaacgtact
     1561 acacttccga gactctattc tggacgggta aagcctgatc cccgagccgt tccggcaccc
     1621 tttgcaagga gaccccgaag atgcgccatc gcttgtcgtc attcgctccc gccctcatgg
     1681 ctttgaccgc cgcgctgacc gccctggccg acggttacga cgtcgtcggc acgccgaacc
     1741 tcggatttac cgccgttggt cccggcgggc tgaagatcaa cggcaccgcc gagaatcttg
     1801 cgaccatcga tcaaggcgac aaggtcgtgt tcaagagctc gctcaaagag atcaagacgg
     1861 gcatcgcgct ccgcgacaac cacacgaaga aatacctcgg caccgatcag tggcccgacg
     1921 cgagcctctc cgtggacaag agcgcgatca aaatacccga agacggcaag aaaacttccg
     1981 gcacggctcc gggaaagttt cgtctgcacg gcgtgactcg cgacgtgaag gtcgcctaca
     2041 cggcggatcg gcacgggagc gagtacgcag tcgagggaca tttcgccgtc aacatcgagg
     2101 atcacaagat cgagaagccc tgctatctcg gcgtctgcgt cgactcgaac gtgaaggtcg
     2161 atgcgaagtt caaacttcac gcgaagtagg ccattgacag cggggtgccc accgacaaat
     2221 aaagggggcc tccatgcgta aatacacggc caaatgccag gcgtggggag tctggcggcg
     2281 cgtgctcgtg gcggctttgc cgctctggtg cgtgctgttc acggcgagac ctgcgcacgc
     2341 gtactcgtgg atgattcgtc acgggtacag cggctgcccc gtgtgccacg ccgatccgtc
     2401 cggcggcgaa acgctcaccg cctatggccg cgcgcagagc gatcttttgc tgcgcacgcg
     2461 ctgggacggg aagaaccccg aggaagccga accttcgaac gc
//
LOCUS       DATIML010000482         5276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_676482, whole genome shotgun sequence.
ACCESSION   DATIML010000482 DATIML010000000
VERSION     DATIML010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5276
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676482"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VLJ38_08375"
     CDS             <1..439
                     /locus_tag="VLJ38_08375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AgmX/PglI C-terminal domain-containing protein"
                     /protein_id="HSU39569.1"
                     /translation="EGIGLGNIGTLGHGAGVGTGQGFGAGHGRLGGSHKTAAPKVRMG
                     ATTVSGRLPPEVIQRIVRQNYGRFRMCYEQGLGRNPNLQGRVSARFVIGRDGSVSNVG
                     NGGSDLPDSGVVSCVLSAFYGLSFPQPEGGIVTVVYPIMLEPG"
     gene            909..1820
                     /locus_tag="VLJ38_08380"
     CDS             909..1820
                     /locus_tag="VLJ38_08380"
                     /inference="COORDINATES: protein motif:HMM:NF024806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU39570.1"
                     /translation="MKLVRCEKIIGLALALVFSAGCSRNGIEAINLANEGDQSVKVNV
                     ENAIGKYEQAVQLDPSNHRILWKLASAYEKKEDWDKMASTLSRATSLAPDFATYWYKR
                     GLALVNQAEAGNKDAYEQAKEPLKKCIEKDPNLAECYYLMGECLQWTDDEQGAVDQYS
                     KAIQHDPTKGFFYPPLADLYLLFKLDKEADQVINEGTKLVTPDEKNLPKIYNMYILLA
                     NAALMRGDKAAQLAAVEKAEKFAGESHPEFSFDLGSTYATMDPPQKERAVRLLNTFTK
                     RVCKGAGAKKFEEQCQTSQSLLQKLGQ"
     gene            1996..>5276
                     /locus_tag="VLJ38_08385"
     CDS             1996..>5276
                     /locus_tag="VLJ38_08385"
                     /inference="COORDINATES: protein motif:HMM:NF024574.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39571.1"
                     /translation="MDLEQRLKQLTSTHDYQGVVEALEQGIGAASDPTAKADLHLRLG
                     RLLRSRFLQGVRALKHFQDAYKQNPALVEALAEARAVYWDLGKLNMVQKLLELQLKAA
                     PDSPDKSALYRQLGDVLSDLGEYERATEAYAKALQSANGKPGDIPELLQDVQVGDAEW
                     QARLSSILKSARGSKDAPSKAQLFLRGARLARRFAPDQVEDLLAQAYAADPIDQHVAA
                     TYEGLLVDSGRTDAILESQRAVLAHLNGTAEQADASFIFGARWALRHTNLELGSQLVE
                     EALRAEPSREEAFTFLRDVYGARGGDWERVISLADELADRSTLGPKASYLLAQAGLIA
                     WRERGDLIRARRSFERLARLDPENPALRAFEAQIGETLRAEAEPEATGQRPRRSKRPK
                     AEPKSEPAASEAAETPTAPPMAEEIEPMTSPPPAAREPEPTPAAAPAAALPEPAAALP
                     EPAPAPSAPAVPAKSENAALVAELREKLAQQAAAKRHHEYVKTLIALGDALADPAERV
                     PQYLEAGELYATKFANQAEAARAYERVLELDASQTKAVAYLRDAYEKRRDWEKLIALM
                     VREAEFLPEGSERAQKFKQVALLATDKVKKPEVCIDLWAIVLQNDAEDIDALNALAGL
                     YERSREYEKLADVLAKLAELTYDTPAKIELLNKLGQVAGDRLKDDERAVDAYRMLLTL
                     SPDDRRAQEQLKKRYVTLGRWDDLEVFYAESGKWDEFIRVLESNETRATDDAQRVGML
                     MKIAELWLTQKGKLDRAARAYEKVLSIDASNLHAAERLVPIYQSANNPKGLSQALEVK
                     LAHVSDPGERLGLLREVAGLYETRLNEKPKAFERYLAAFGLAPDDPQTQADVERVAKV
                     TSGWEAVVTAYRAAIEHSNDSAEQNALRLRLGRVLVEEVSRVDDALSEYRAVYESEPD
                     NETALGALEGLYRRAGRFRELLEVQNRKLELAADAVERKRIRYEVAKLYEKELGDVAS
                     AIETHQAVLEEDPADEGALAALDGLYERSGQWEPYVEVLRKRIELSSDDRLLVDLKFR
                     LARALYDYLGDAAGALENYREILFLDAEHEGARTALEGMLAERALSGEAASILEGIYE
                     ARGDW"
BASE COUNT          979 a         1708 c         1754 g          835 t
ORIGIN      
        1 tgaaggcatc ggcctcggca atatcggcac gctcggccac ggcgccggtg tgggtacggg
       61 ccagggtttc ggcgctggtc acggtcgcct cggtgggtcg cacaagactg ctgcgcccaa
      121 ggtgcgtatg ggtgcgacga cggtgagcgg tcgtctgccg ccggaagtca ttcagcgcat
      181 cgtgcgccag aactacggcc gtttccgcat gtgctacgag cagggcctcg ggcgaaaccc
      241 gaacctgcag ggtcgcgtgt cggcgcgttt cgtgatcgga cgtgacggct cggtgtctaa
      301 cgtcggcaac ggtgggtcgg atttgccgga tagcggtgtc gtgagttgtg tgctctccgc
      361 cttctacggc ttgagcttcc cgcaacccga aggcggcatc gttaccgtcg tttaccccat
      421 catgctcgag ccgggctgag tcgctccggc tttcggctcc tcttgacctg agccgacgcc
      481 cgccgatttt gagttttggc gtcgtttggc tgcgcttcgc tgctcacgta cctcggtacg
      541 ctccgctgcg atgctcgcca aagcctagca aaacccaaac ttggcgggcg ggctcgtgta
      601 ggcgtttggc tccatgcgcg ttggatcagc gagccgcggt gtggtgtgtg ctgcgtcagg
      661 ccgaacgcgg gcaaaggtgc gtaggtccgc gcaaaaacgc ggcggattgc ggctttactt
      721 cacggtggcc gtgcgcctat gctcgggtcc cttcttgcta gcgcaccaag gcccgaatcg
      781 tgtcgcgccg aagtcggccg cacggcggtc ccggcgagcg acgtcctcgg aacttatcgc
      841 ttcatgattg tcgggtcggg ctcgtagagc cgcggccata actcccttcg aaccacggat
      901 agcgcctcat gaaactcgtt cgatgcgaaa agatcatcgg tctcgccctg gctctcgtgt
      961 tttcggctgg ctgcagccgc aacgggatcg aagcgatcaa cctcgcgaac gagggtgatc
     1021 agtcggtcaa ggtcaacgtc gaaaatgcga tcggcaagta cgagcaagcc gtgcagctcg
     1081 atccgagcaa tcaccgcatc ttgtggaagc tcgcgagcgc gtacgaaaag aaagaggact
     1141 gggacaagat ggcgtcgacg ctctcgcgcg cgacctcgct tgctccggac tttgcgacct
     1201 attggtacaa gcgcggactc gcgctcgtga accaggccga ggccggcaac aaggacgcgt
     1261 acgagcaggc gaaggagcct ctcaagaagt gcatcgagaa ggacccgaac ctcgccgagt
     1321 gttactacct gatgggcgaa tgcctgcagt ggacggatga cgagcagggc gcggtcgatc
     1381 agtactcgaa ggcgatccag cacgatccga ccaagggctt cttctacccg ccgctcgccg
     1441 atctctacct gctgttcaag ctcgacaaag aggccgacca ggtgatcaac gagggcacga
     1501 agctcgtgac gccggacgaa aagaacctgc cgaagatcta caacatgtac atcttgctcg
     1561 cgaacgcggc gctcatgcgc ggcgacaagg ccgcgcagct cgccgccgtc gagaaggcgg
     1621 aaaagttcgc gggcgagtcg cacccggagt tctcgttcga tctcggcagc acgtacgcga
     1681 cgatggatcc gccccagaag gagcgcgcgg tccgtctcct caacacgttt acgaagcgcg
     1741 tctgcaaagg tgcgggcgcc aagaagttcg aggagcagtg ccagacatcg cagtcgctgc
     1801 tccagaagct cggacagtga cagcgtacct tgcccgcatc gcttccgtga tcgcagggca
     1861 agtgtgtgaa aagaaccggc tcgagcagct cagcgtgagt tgctcgagtc gtgaccaagg
     1921 ggcgtcgtgc ttcttccctc cgaggagcgc gaatgcagag gggtttgggg ggaatcggca
     1981 gtcgaccgag gcagcatgga tctagagcag cgtctgaagc agcttacgag cactcacgac
     2041 tatcagggcg tcgtcgaggc gctggaacaa gggattggcg ccgcaagcga tcccacggcg
     2101 aaggccgact tgcacctgcg cctgggacgg cttttgcgca gccgcttcct tcagggcgtg
     2161 cgggcgctca aacacttcca ggacgcgtac aagcaaaacc ccgcgctcgt ggaggcgctc
     2221 gccgaggctc gagccgtcta ctgggatctc ggtaagctca acatggtgca gaagctcctc
     2281 gagcttcagc tgaaggctgc gcccgacagc cccgacaaga gcgcgcttta tcgacagctc
     2341 ggcgacgtgc tctccgacct cggggagtac gagcgcgcga ccgaagcgta cgccaaggcg
     2401 ctccagagcg cgaacggcaa gccgggcgac atccccgagc tgctccaaga cgtgcaggtc
     2461 ggcgacgccg aatggcaagc ccgcctgtcc tcgattttga agtcggcgcg cggctcgaag
     2521 gacgcaccca gcaaggcgca gctcttcctg cgcggcgcgc gactcgcgcg caggttcgcg
     2581 cccgatcagg tcgaagacct gctggctcaa gcatacgcgg ccgatcccat cgatcagcac
     2641 gttgcagcga cgtacgaggg gctgctcgtc gacagcggtc gcacggacgc tatcctcgaa
     2701 tcgcagcgcg cggtgctcgc gcacctgaac ggcacggcgg agcaagcgga cgcctccttc
     2761 attttcggcg cgcgctgggc gctccgccac acgaacctcg agctcggctc gcagctggtc
     2821 gaagaggcgc tgcgtgccga gccgtcacgc gaagaagcgt tcaccttcct gcgcgacgtg
     2881 tacggtgcgc ggggcggcga ctgggagcgc gtcatttcgc tcgccgacga gctcgcagat
     2941 cgctcgacac tcggtccgaa ggcgagctac ttgctcgccc aagccggtct catcgcttgg
     3001 cgtgaacgag gggatttgat ccgcgcgcgg cgctcgttcg agcggctcgc tcgcctcgac
     3061 cccgagaacc ctgcgctgcg cgcgttcgag gcgcagatcg gtgagacgct gcgcgccgaa
     3121 gccgagcccg aggccacagg tcagcggccg cgccgttcga agcgtccgaa ggctgaaccc
     3181 aaatccgagc ccgccgcgag cgaagccgcg gagacgccca ctgcaccgcc catggctgaa
     3241 gagatcgagc ccatgacctc gcctccgccg gccgcacgcg agccggagcc gacgcccgcc
     3301 gctgcgccgg cagccgctct gcccgagccg gcagccgctc tgcccgagcc ggctcccgcg
     3361 ccgagtgcgc cagccgttcc ggcgaagagc gagaacgcag cgctcgtcgc cgagctgcgc
     3421 gaaaagctcg cgcagcaagc cgccgccaag cggcaccacg agtacgtcaa gacgctgatc
     3481 gcgcttggtg acgcgctcgc agatccggcc gagcgggttc cgcaatacct cgaagcgggc
     3541 gagctttacg cgaccaagtt cgcgaaccag gcggaagccg cgcgcgctta cgagcgcgtg
     3601 ctcgagctcg acgcctcgca gacgaaggcc gtcgcctact tgcgcgatgc ctacgagaag
     3661 cggcgcgact gggagaagct catcgcgctc atggtgcgcg aagcggagtt tctgcccgag
     3721 ggttccgaac gcgcgcagaa gttcaagcag gtggcgctgc tcgcgacgga caaggtcaaa
     3781 aagcccgagg tttgcatcga tctctgggcg atcgtgctcc agaacgacgc cgaggacatc
     3841 gacgcgctca acgcgctcgc gggcctctac gagcggtcgc gcgaatacga aaagctcgcc
     3901 gatgtgctcg cgaagctcgc ggagctgacc tacgacacgc ccgccaagat cgagctcttg
     3961 aacaagctcg gccaggtcgc cggcgaccgt ttgaaggacg acgagcgcgc ggtcgatgcc
     4021 taccgcatgc tgctcacgct ctcgcccgac gaccgtcgcg cgcaggagca gctcaagaag
     4081 cgttacgtca cgctcgggcg ctgggacgac ctcgaggtct tctacgccga gagcggcaag
     4141 tgggacgagt tcatccgcgt gctcgagagc aacgagacgc gcgcgaccga cgacgcgcaa
     4201 cgcgtcggca tgctcatgaa aatcgccgag ctctggctca cgcagaaggg caagctcgat
     4261 cgtgcggcgc gcgcgtatga aaaggtgctg agcatcgacg cgtcgaatct gcatgcggcc
     4321 gagcggctcg tgccgatcta ccagagcgcc aataacccca aggggctcag tcaggccctc
     4381 gaggtgaagc tcgcgcacgt gagtgatccg ggcgagcggc tcgggctgtt gcgcgaagtg
     4441 gcgggtctgt acgagacgcg tctcaacgag aagccgaagg ctttcgagcg ctacttggcg
     4501 gcgttcgggc tcgcgcccga cgacccgcaa acacaggcgg acgtcgagcg cgtcgccaag
     4561 gtaacgagcg gctgggaagc cgtggtcacg gcttaccgcg ccgcgatcga gcattcgaac
     4621 gacagcgcgg agcaaaacgc gctccggctg cggctcggcc gcgtgctcgt cgaagaggtg
     4681 tcgcgcgtcg acgacgccct ctccgaatac cgcgccgttt acgagagcga acccgacaac
     4741 gaaaccgcgc ttggcgcgct cgaagggctc taccgccgcg ccggtcgttt ccgcgagttg
     4801 ctcgaggtcc aaaatcgcaa gctcgagctc gcggccgacg cggtcgagcg caagcgcatt
     4861 cgctacgagg tcgcgaagct ttacgaaaag gagctcggcg acgttgcgtc cgccatcgag
     4921 acgcaccagg cggtgctcga ggaggacccc gccgacgagg gcgcgctcgc ggcgctcgac
     4981 gggctctacg aacgttcggg gcagtgggag ccgtacgtcg aggtgctgcg caagcgcatc
     5041 gagctctcct cggacgatcg cttgctcgtc gatctcaagt tccgcctcgc cagagccctc
     5101 tacgactacc tcggtgacgc ggccggcgcg ctcgagaact atcgtgagat cctgttcctc
     5161 gatgccgagc acgagggcgc tcgcaccgcg ctcgaaggca tgctcgccga gcgcgctttg
     5221 agcggcgaag cggcctcgat cctcgaaggc atttacgagg cgcgcggcga ctggga
//
LOCUS       DATIML010000483         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2116218, whole genome shotgun sequence.
ACCESSION   DATIML010000483 DATIML010000000
VERSION     DATIML010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2116218"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..531
                     /locus_tag="VLJ38_08390"
     CDS             121..531
                     /locus_tag="VLJ38_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39572.1"
                     /translation="MEIYLDRRAIRQIRLAAQEAIEEDDTESLREDVMEAFTEEQVEE
                     IERRLDNGDFYEFLTDVLDEWGGDDVDELLELLETQLGEVGIDLKTDTKSEEGEEADE
                     ESGAEAGEADEADDDFEDEDEDEEDDEEEEEETP"
     gene            complement(534..>1582)
                     /locus_tag="VLJ38_08395"
     CDS             complement(534..>1582)
                     /locus_tag="VLJ38_08395"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU39573.1"
                     /translation="GAALGCAPHVDARFAGAAARADALYVAGRYRESADAWLAASCTA
                     KTGYDEDEAVYRAAESFVKAGEPGPAESLLVRLATGKGERAARAGFDRALLIAETEPE
                     RAQTLRLQALEQHPESGVAAQALREYLAYVEEHAGEVAALSRCETLRAQFAATELDEA
                     ASYQCAARHERHGDEALALRAYLTTAERHPYPHGALWDDALAGAARCEERLGDARAAI
                     GTLERMLARREHAALFGSYERSRYAEARFHIAELYRDALGDPERAAHEFRRVYDEHPT
                     SLLLDDALFEEALIEARSGKAERACATVRLLVSHEPASHYAGCTRLLCASAAAPKRSC
                     ADELKAKIDGDAGR"
BASE COUNT          258 a          519 c          562 g          243 t
ORIGIN      
        1 gcgatcacca gcatgtcgcc gcccttgagc gtgttcgcgt ggccctagcc gctctcatgt
       61 cttgactctc ccatgagcct tggtttagtg cccggtcgag ttcagaggac gcatcctaca
      121 atggaaatct acctcgaccg acgcgccatc cgccaaatcc gcttggctgc ccaagaagcc
      181 atcgaggagg acgacaccga gtcgctccgc gaggacgtga tggaggcttt caccgaagag
      241 caggtcgaag aaatcgaacg ccggctcgac aacggggact tttacgagtt tctcacggac
      301 gtcctcgacg agtggggcgg agacgacgtg gacgagctcc tcgagctgct cgagacgcag
      361 ctcggcgagg tcggcatcga tctcaagacc gacacgaagt ccgaggaggg cgaagaggcg
      421 gacgaagaga gcggcgccga ggccggcgag gccgacgagg ccgacgatga cttcgaggac
      481 gaagacgaag acgaagagga cgacgaagaa gaagaagaag aaacgccgta ggcctagcgg
      541 cctgcgtcgc catcgatctt cgctttgagc tcgtccgcgc agcttcgctt cggcgctgcc
      601 gcgctcgcgc acaaaaggcg ggtgcagcct gcgtaatgcg aggcgggctc gtggctcacg
      661 agcagccgta ccgttgcgca ggcgcgttcg gccttgccgg agcgtgcctc gatgagcgct
      721 tcctcgaaga gtgcgtcgtc gaggagcagg ctcgtcggat gctcgtcgta cacgcgacgg
      781 aattcgtgtg cggcgcgctc ggggtcgccg agcgcgtcgc ggtagagctc ggcgatgtga
      841 aagcgagctt ccgcgtaccg gcttcgctcg tagctgccga agagcgcggc gtgctcgcgc
      901 cgcgcgagca tgcgttcgag cgtcccgatg gcggcgcgcg cgtcgccgag ccgctcctca
      961 cagcgcgcgg cgccggcgag cgcgtcgtcc cagagcgcgc cgtgcgggta ggggtgtcgc
     1021 tcggcagtcg ttaggtaagc gcgcagcgcg agcgcctcgt cgccgtgccg ctcatggcgc
     1081 gcggcgcatt ggtaggaggc cgcttcgtcg agctcggtgg ctgcgaactg ggcgcgtaaa
     1141 gtttcgcagc gcgaaagcgc ggcgacctcg cctgcgtgct cctcgacgta ggccaggtac
     1201 tcgcgaagcg cctgcgcggc gacgcccgat tccgggtgct gctcgagcgc ctggagccgc
     1261 agggtctggg cccgttccgg ctccgtttcg gcgatgagga gcgcacgatc gaaccctgct
     1321 cgggccgcgc gctccccctt tcccgtggca aggcgcacga ggagtgactc cgccgggccc
     1381 ggttcgccgg ctttcacgaa gctctccgcg gcccggtaca cggcttcgtc ttcgtcgtac
     1441 ccggtcttgg ccgtacacga cgccgcgagc caggcatccg ccgattcgcg gtaacggccc
     1501 gcaacgtaga gcgcgtcggc gcgcgccgcg gcgcccgcga accgggcatc gacgtgcggc
     1561 gcgcacccga gcgcggcgcc ga
//
LOCUS       DATIML010000484         8122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_963511, whole genome shotgun sequence.
ACCESSION   DATIML010000484 DATIML010000000
VERSION     DATIML010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8122
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_963511"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VLJ38_08400"
     CDS             complement(<1..273)
                     /locus_tag="VLJ38_08400"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU39574.1"
                     /translation="MTAGEHEPFRPSIPPELAPASRPSAPPPAAISVRHLWHRYGNLD
                     VLRDVSFDVAPGEIFGFIGPNGAGKTTTIRVMATLLEPTAGSVHIDG"
     gene            complement(270..2333)
                     /locus_tag="VLJ38_08405"
     CDS             complement(270..2333)
                     /locus_tag="VLJ38_08405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39575.1"
                     /translation="MGSFVQRVLGACSLLGLLLGSVRGSAAPPAPPSLTLTTEPVLGP
                     GGPLPEGWSTYAVWLTNGGGGELSGTLELEVKTPFSREFSHRVTAPFTLAGGARATLE
                     LPTHGYASAPPDVTLTARAADGSVLATAAVPEPKPNDPLLVDLSTPSRVGPAVRNIGL
                     FLENHAGGGIRVASPLVTSPPVDPVTGDLVLPRWAAGYAPAALVVTSGKRLATLGRPE
                     LAALSDWVLAGGALAVAIERAEDLRFPPLVALAGGAVERTDAAPSLVAATVFLEPGEL
                     TPGTAVSPGSSSRAIVSTRLGPRPDTAALLEGFAGGNLRPSPWGAVASYGLGEVHLLA
                     FDLGEPFASDRWVALKLSDLLRHTVERQVAIALPLGRTSFDSVASNAIRAELDPNRSM
                     RWTIVVSALLLLVYAALAGPVSFWLAARRGRPLRALWQLPIWAAATLALIVTIGLVGK
                     GIRGRARHLTLMEAGAGMERAAATRYRAFYTSASRELSVQPTARSSLIDVVSSDDFVE
                     RLLVVDRDGAHLERLRTRPWATTVVRDDGFATLAGGISIVRDETGDLAVHNRTARDLV
                     GAVLKVPGHGFFAFGRIGDGKVVHAREGEALSSSIGVPSMYSRLHPLGSVLLGPTVDK
                     YAQGLGSALAAIEAQASETDFWPDDVPVLIAQLDGGEGKLKDTGYELDRDRVIVRVLG
                     FGGVP"
     gene            complement(2333..3376)
                     /locus_tag="VLJ38_08410"
     CDS             complement(2333..3376)
                     /locus_tag="VLJ38_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU39576.1"
                     /translation="MPVTSNSVELESRVAAAREACGRLRTAIGQVIVGQAEVVDEVLW
                     GLVAGGHVLLEGNPGLGKTLLVRTLASCLDLGFSRIQFTPDLMPSDVTGTNMLALGMA
                     GTSTGRFELHKGPIFGQVVLADEINRATPKTQSALLEAMQEHAVTIAGTRHALDEPFF
                     VLATENPIEMEGTYPLPEAQLDRFLLKVLVPTPGEDDLTQILLRTTGQPAPAPPRVLA
                     RADVIELRALCRDVAVAEPVLRYAARLVGASAPDAPGAPPLVRRALRLGAGVRGAQAL
                     VLAGKAVALLAGRSHVSFADLARTAKPVLRHRLLRSFEGEADGITPDRVIDELVQTVP
                     ARPETVERMVQGN"
     gene            3644..4210
                     /locus_tag="VLJ38_08415"
     CDS             3644..4210
                     /locus_tag="VLJ38_08415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39577.1"
                     /translation="MRFPTLMVPLFALTLFACSHAEEEKAKIDEIQKKADERVTQAEN
                     QAKTKLADLQKELDDTKAALAKAQTAAQDAVSKAQTGAEDQAKSAEAALVTARQAFKS
                     KAKLELSDANKDLTEVQGKVSKVAAKSKAQVQSLMQDIVKQQKTLAKDIAAFDAATLD
                     TFRTVNSQFEKDLASYKAKIRTVKAKTQ"
     gene            4299..5945
                     /locus_tag="VLJ38_08420"
     CDS             4299..5945
                     /locus_tag="VLJ38_08420"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU39578.1"
                     /translation="MGSVAPARDARVADGAADDLSVTRQTTKVAATGVLIPLREDRYA
                     PGVTVEQKYALVRLLGEGGMGSVWVARNLTLNSHVALKLMRADFAQAVPGAGERMLQE
                     ARAAAAIHHPAIVQIFDFGRTRDGDPFISMELLDGESLSATLKRREKLPAMRAVQVLL
                     PIADALVVAHARGVVHRDLKPDNVLLARLADGRVQPKILDFGIAKLDGPASPKLTLDG
                     TVLGSPAYMSPEQARGQSDIDLRVDVWAFSVMLYELVTGCTPFAGESYNALLYAIMGQ
                     EPLPLAEHGLDEPELWAILARGLDKNRDTRFPNMRAFGRALAEWLLDRKVRTDITQAP
                     LRGWLEGSEAPLAKPSLFASLVPRGEMSESPPTVHPAPGDAVGSMLDLLKEGIPPSQV
                     PIDHVRTARGKTTIGRRAGNFEPGYGPVSIASKTLRTVPRWAWFAAPAAIAFLSAIMA
                     SLMSGSGSHEPAAGDSAATTTAAAPAKPLPTSNAATAVSPPAPSVTAPSSPAGTALTP
                     ATSKPSAPPAKAVKATRPTAPAHAAPKRQPSRAELKNPFH"
     gene            complement(6015..7004)
                     /locus_tag="VLJ38_08425"
     CDS             complement(6015..7004)
                     /locus_tag="VLJ38_08425"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HSU39579.1"
                     /translation="MSASRTAALGVCACLLGIAPWSQAEGGNGRQHANKGATAEPTAG
                     TAPAPLVPAANEDAGRTAHAKALFEKAANAYASGHYYEAIESFLELDRFYPNDQLPFN
                     IAKAYDNLGSRPGALRYYREYLRRSPGAPDHEAVVTRVRELQQALAERGLQQVTVFSD
                     PPEGTVLLDDRPVGLTPWTGETWPGRHRVTVEKNGYLEREVVMDLDALKAEEVNLELT
                     RAPLTAPSPAPAPVSQQKPWPLTRRMGVLTWATLATGTAALGTAIAIQATSGSKSSGI
                     TPATGFFAGVGTAAAVVGGVMLYFDLSDKSGDQRHASVSAGPERIVATYQTSF"
     gene            complement(7077..>8122)
                     /locus_tag="VLJ38_08430"
     CDS             complement(7077..>8122)
                     /locus_tag="VLJ38_08430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39580.1"
                     /translation="AGLDAAVNELSHNELTSKAARALGDGDLTAFDAEMQRLATLTEK
                     RDREAAKQTLEDAAKAARDKGAKGLAETLERQKAALERAESKLDALRELAGRLGGALD
                     DDGKQALRELKRSGSAEAQKKLSEALERALKKLSEDERKKLAENLRKNLQDSGGTGNP
                     MSDKELEALARRLEQKGGDQSLEEQLRELARRDPSDDARRERGLGDAERGGADAQRGL
                     GAVPMPGGGPGKDDGKQHGPQQEQAQGNGNGSATNNGSGSGHDQGQGDHAGKTAPLDV
                     KELRSKADGHILPGAPMHAATLGRAPARAGETANQLGTGKLGEVGPGEVGAVEGADIP
                     EEYREQVGRYFEP"
BASE COUNT         1260 a         2787 c         2822 g         1253 t
ORIGIN      
        1 gccgtcgatg tggacgctgc cggccgttgg ctcgagcagc gtcgccatca cgcggatggt
       61 ggtcgtcttg cccgcgccgt tcgggccgat gaagccgaaa atctcgcccg gtgccacgtc
      121 gaagctcaca tcgcgcagca cgtcgagatt tccatagcgg tgccagaggt gtctaaccga
      181 aatggcggcc ggcggcggcg cggagggccg ggaggccggc gcgagctcgg gaggtatgct
      241 cgggcggaac ggctcgtgct cacccgccgt cacggtacgc ctccgaaccc gagcacgcgc
      301 acgatgaccc ggtcgcggtc gagctcgtag cccgtgtcct tgagcttgcc ctcgccgccg
      361 tcgagctggg cgatcaagac cggcacgtcg tccggccaga agtcggtctc tgacgcctga
      421 gcctcgatgg cagccaacgc ggagccgagc ccctgggcgt atttgtcgac ggtcggtccg
      481 agcagcaccg agccgagcgg gtgcaggcga gagtacatcg agggtacgcc gatcgaagag
      541 gagagcgctt cgccttcgcg cgcgtggacg accttgccgt cgccgatgcg gccgaacgcg
      601 aagaagccgt gcccgggcac cttgagcacc gcgcccacga ggtcgcgggc cgtccggttg
      661 tgaacggcga ggtcgcccgt ctcgtcgcgt acgatgctga tcccgcccgc gagcgtcgcg
      721 aagccgtcgt cgcgcacgac cgtggtcgcc cagggacgcg tgcgcagccg ctcgaggtgc
      781 gcgccgtcgc ggtccacgac gagcaggcgc tcgacgaaat cgtcgctcga aaccacgtcg
      841 atgaggctcg aacgcgccgt cggctgcacg ctgagctcgc gcgacgcgga ggtgtaaaac
      901 gcgcggtaac gcgtcgctgc ggcacgctcc atgcccgcgc cggcctccat caacgtgagg
      961 tggcgcgcgc gtccgcgaat gcccttgccg acgaggccga tcgtcacgat cagcgcgagc
     1021 gttgccgccg cccaaatcgg caactgccac agcgcgcgca gcggtcgtcc gcgccgcgcg
     1081 gcgagccaaa agctgacggg cccggcgagc gccgcataca cgagcagcag tagcgccgag
     1141 accacgatgg tccagcgcat cgagcggttg ggatcgagct cggcgcggat agcgttcgac
     1201 gccacgctat cgaacgacgt gcgaccgagc ggcagcgcga tcgcgacctg gcgttcgacg
     1261 gtgtgacgga gcaagtccga gagcttgagc gcgacccagc ggtccgacgc gaacggctcg
     1321 cccaaatcga acgccagcag gtgcacctcg ccgaggccgt agctcgcgac ggcaccccac
     1381 ggactcggcc gcaggttgcc gcccgcaaag ccctcgagca acgcggccgt gtcggggcgc
     1441 ggaccgagcc gggtcgaaac aatcgcgcgg ctgctcgagc caggcgacac ggccgtgccg
     1501 ggcgtgagct cacccggttc gagaaagacg gtcgctgcga cgaggctcgg ggcggcgtcg
     1561 gtgcgttcga ccgcgccgcc cgcgagcgcg acgagcggcg gaaaacgcag gtcttccgcg
     1621 cgttcgatcg ccacggcgag cgcgccgccc gcgagcaccc aatcgctcag cgcggcgagc
     1681 tctgggcggc cgagcgtcgc gaggcgcttg ccgctcgtga cgacgagcgc cgcgggcgcg
     1741 taaccggccg cccaacgcgg cagcacgaga tcgcccgtca ctggatcgac cggcgggctc
     1801 gtcacgagcg gcgaggcgac tcggatgccg ccgcccgcgt gattttcgag aaacagcccg
     1861 atgttgcgca ccgcggggcc gacgcgactc ggcgtcgaga gatcgaccaa gagcgggtcg
     1921 ttcggcttgg gttcggggac tgcggccgtc gcgagcacgc tgccgtccgc tgcgcgcgcg
     1981 gtgagcgtca cgtcgggggg ggcgctcgcg tagccgtgcg tcggcagctc gagcgtggcg
     2041 cgcgcgcccc ccgcgagtgt gaacggcgcg gtcacgcggt gcgaaaattc acgactgaac
     2101 ggcgtcttca cctcgagctc gagcgtcccg ctgagctcac cgccgccgcc gttcgtgagc
     2161 cacacggcgt aggtcgacca gccttcgggc agcggccccc cagggccgag cacgggctcg
     2221 gtcgtgagag tgagcgacgg cggagcaggt ggcgccgcgg accccctgac ggagccgagc
     2281 agcaaaccga gcagcgagca ggcgccaaga acgcgctgga cgaaagagcc cactagttgc
     2341 cctgcaccat gcgctccacg gtttccgggc gcgccggcac ggtttgcacg agctcgtcga
     2401 tcacgcggtc gggcgtgatg ccgtcggctt cgccctcgaa gctccggagc aaacggtggc
     2461 gcaagacggg cttcgccgtg cgcgcgaggt ccgcgaacga gacgtgactg cgaccggcga
     2521 gcagcgcgac ggccttgccc gcgagcacga gcgcttgagc gccgcgcacg cctgcgccga
     2581 gccggagcgc gcgccgcacg agcggtggcg cgccgggcgc gtccggcgcg cttgccccga
     2641 ccaagcgcgc ggcatagcgc aacacgggct cggcgacggc gacgtcgcga cagagcgcgc
     2701 ggagctcgat cacgtccgcg cgtgcgagga cgcgcggtgg tgcgggtgcg ggctgtccgg
     2761 tcgtccgcaa caggatctga gtgagatcgt cctcgcccgg cgtgggcacg agtaccttga
     2821 gcagaaagcg gtcgagctgc gcttcgggca gcgggtaggt gccttccatc tcgatcgggt
     2881 tttccgtggc gagcacgaag aagggctcat cgagcgcgtg gcgcgtgccg gcgatcgtga
     2941 cggcgtgctc ctgcatggct tcgagcagcg cgctctgagt tttgggcgtc gcgcggttga
     3001 tctcgtccgc gagcacgact tgtccgaaaa tcggcccctt gtggagctcg aagcgcccag
     3061 tgctcgtgcc ggccataccg agcgcgagca tgttggttcc ggtcacgtcg ctcggcatta
     3121 gatcgggcgt gaattggatg cgggaaaatc caagatcgag gcacgacgcg agcgttcgga
     3181 cgagcaacgt cttgccgagt cccgggttgc cttcgagcag cacgtggccg ccggcaacga
     3241 ggccccagag cacctcgtcc acgacctcgg cttggccgac gatgacttgc ccaatcgcgg
     3301 tgcgcagccg cccacaagcc tctcgcgccg cggcgacacg cgattcgagt tctacggagt
     3361 tcgacgtgac tggcatcggc cgctgaggct accatcgcgt ggggatcgat ggagcggaac
     3421 gacgggacag cgcgatttct gcgggaacgt acgccgtcag cgctgccacg ccgaccgacg
     3481 ccgagctctc ggctgccgct ttcgaatcca gaacgcgaac acgattcgta catgagcgac
     3541 gacgcgcctc ggcttttata agtgtggatg ctcttctgcc gcgaagtcgc gaatctgcac
     3601 gggtgaagac ggcgttaccc aatcggtggt agcgtcatag cccatgcggt tcccgacgct
     3661 catggtgcct ctatttgcgc tcacgctctt tgcttgcagt cacgccgagg aggaaaaagc
     3721 caaaatcgac gagatccaga agaaggcgga cgagcgcgtc acgcaggccg aaaatcaggc
     3781 caagacgaag ctcgctgacc tgcagaagga gctcgacgat accaaagccg ccctcgccaa
     3841 ggcgcagacg gccgcccagg acgccgtcag caaggctcaa accggcgcgg aagatcaggc
     3901 caagtctgcg gaagctgcgc tcgtgacggc gcgtcaggca ttcaaatcca aggccaagct
     3961 cgagctctcc gacgccaaca aggatctcac cgaggtgcag ggcaaggtct cgaaggtcgc
     4021 ggccaagtcc aaggcgcagg tgcagtcttt gatgcaggac atcgtcaagc agcagaagac
     4081 gctcgccaag gacatcgccg ccttcgacgc cgcgacgctc gacacgttcc gcaccgtgaa
     4141 ttcgcagttc gaaaaagacc tcgctagcta caaggcgaag attcgaaccg tgaaggccaa
     4201 gacgcagtag tcgcacaggc acctacctcg gagcgttcgc cgcgcgggct caagtttcgc
     4261 cggctcgtgc cgtagtcctc cactggagtc gactcaccgt gggaagcgtt gcccctgcca
     4321 gggatgctcg cgtcgcggac ggcgcggccg atgatttgtc cgtcacccgt cagacgacga
     4381 aggtcgccgc gacgggcgtg ctgattccgc tcagagagga ccgctacgcg cctggcgtca
     4441 ccgtcgagca gaagtacgcc ctcgttcggc tgctcggcga aggcgggatg gggtcggtgt
     4501 gggtggcgcg aaatctcacg ctaaactccc acgtcgcgct caaactcatg cgcgccgact
     4561 tcgcgcaggc cgtgccgggc gccggtgagc gcatgttgca ggaagcgcgc gccgcggcgg
     4621 ccatccatca ccccgcgatc gtccagattt tcgattttgg gcgcacgcgc gacggcgacc
     4681 cgttcatcag catggagctg ctcgacggcg agagcctgtc ggcgacgctc aagcggcgcg
     4741 agaagctccc ggccatgcgc gccgtgcagg tgctcttgcc gatcgccgac gcgctcgtgg
     4801 tcgcgcatgc ccgcggcgtc gtccaccgcg atctgaagcc cgacaacgtg ctcctggcgc
     4861 gcctcgccga cggccgagtg cagccgaaga ttttggactt cggcatcgcc aagctcgacg
     4921 gtccagcgtc accgaagctc acgctggacg ggacggtgct cggcagtccc gcgtacatgt
     4981 cccccgaaca agcgcggggt cagtcggaca tcgatctgcg cgtcgacgtg tgggcgttct
     5041 cggtgatgct gtacgagctc gtgacgggct gcacgccgtt cgcgggcgag agctacaacg
     5101 cgctgctcta cgcgatcatg gggcaggagc cgctcccgct cgccgaacac gggctcgacg
     5161 aaccggagct ctgggccatt ctcgcgcgcg gcctcgacaa gaaccgcgac acgcgcttcc
     5221 cgaacatgcg ggcgttcggt cgcgcgctcg cggagtggct actcgatcgc aaggtgagga
     5281 cggacatcac gcaggcgccg ctcaggggtt ggctcgaggg gagtgaagcg cccctcgcga
     5341 agccttcgct gttcgcgtcg ctcgtgccga ggggtgagat gagcgagtca ccgccaaccg
     5401 tgcaccccgc gccgggcgac gccgtcggct cgatgctcga cctcttgaag gagggcattc
     5461 cgccgtcaca ggtcccaatc gatcacgtgc gcacggcgcg cggcaagacg accatcggtc
     5521 gtcgtgcggg aaatttcgag cccggctacg gccctgtatc gatcgcatcg aagacgttgc
     5581 gcaccgtgcc gcgctgggcc tggttcgcgg cgcccgcagc gatcgcgttc ctgagcgcca
     5641 tcatggcgtc gctcatgagc ggctcgggtt cacacgagcc ggcggcaggg gattccgcgg
     5701 ccaccaccac cgcggcggca ccggcaaagc cgctcccgac gagcaacgca gcgactgcag
     5761 tgagcccgcc agcgccgagc gtgacggctc cgtcctcacc agccgggacc gcgctcacgc
     5821 cggccacgtc gaagccgagt gcgcctccgg caaaagccgt gaaggcgacg cgccccacgg
     5881 cgcccgcgca tgccgcgccc aaacgtcagc cctcgcgcgc cgagctcaaa aatccattcc
     5941 actgaccgcg ccttgcgaca gcgccgtccg cccagcgcgc tgagcccacg acgtgtcgcg
     6001 tctcgaagcc gacttcagaa cgacgtctgg tacgtcgcga cgatccgctc tggccccgcg
     6061 ctcacgctcg cgtgacgctg gtcccccgat ttgtcgctca aatcgaagta gagcatgacg
     6121 ccgcccacga ctgcggcggc cgtccccacg ccggcgaaaa agccggtcgc gggcgtgatg
     6181 cccgagctct tggaccccga ggtggcttga attgcaatcg ccgtaccgag cgccgccgtg
     6241 cccgtggcga gcgtcgccca cgtgagcacg cccatgcggc gcgtgagcgg ccacggtttc
     6301 tgttggctga cgggcgcggg cgccggcgac ggcgccgtga gcggcgcgcg cgtgagctcg
     6361 aggttcactt cctcggcttt gagcgcgtcg aggtccatga cgacctcgcg ttcgaggtat
     6421 ccgttcttct ccacggtcac gcggtgccgt cccggccagg tttcccccgt ccagggcgtc
     6481 agtccgaccg gtcgatcgtc gagcagcacc gtgccttcgg gcggatcgct gaacacggtg
     6541 acttgctgca ggccgcgctc ggcgagcgcc tgttggagct cccgcacgcg ggtcacgacc
     6601 gcctcgtgat cgggcgcgcc cggcgagcgt cgcaagtact cgcggtagta gcggagcgcg
     6661 cctgggcggc tgccgagatt gtcgtacgcc ttggcgatgt tgaaggggag ctggtcgttc
     6721 ggataaaaac ggtcgagctc gaggaagctc tcgatcgcct cgtagtaatg accggacgcg
     6781 tacgcgttcg ccgctttctc gaacagggcc ttggcgtggg cggtgcgccc cgcgtcctcg
     6841 ttcgcggccg ggacgagcgg cgccggcgca gtgcccgctg tcggctcggc cgtggcaccc
     6901 ttgttcgcgt gttgccgccc gttcccgcct tcggcttggg accaaggtgc gataccgagc
     6961 aagcaggcgc agacgccgag ggcggcagtt ctcgaagcgg acatgtctcg tttcaagaac
     7021 ggccgctcag tgcgaaggct taggctcgag cgacgctctg ccggaacgga acggcgctaa
     7081 ggctcgaagt acctgcccac ctgctcgcga tattcttccg gaatgtcggc accttcgacc
     7141 gcgccgacct cgccgggccc cacttcgccg agcttgcccg tgccgagctg attggcggtt
     7201 tcgcccgccc gtgccggcgc gcgaccgagt gtcgccgcat gcatcggcgc gcccggcaag
     7261 atatgcccgt cggccttgga gcggagctcc ttcacgtcga gcggcgcggt cttgcccgcg
     7321 tggtcgccct gaccttggtc gtgcccggag cccgagccgt tgttggtggc ggagccattg
     7381 ccgttgcctt gcgcctgctc ttgttgtggg ccgtgctgct tgccgtcgtc cttgccggga
     7441 ccgcctccag gcatggggac ggcgccgagc ccgcgctggg catccgcgcc cccgcgttcg
     7501 gcgtcgccga gtccacgttc tcgccgcgcg tcgtcgctcg gatcgcgtcg ggcgagctca
     7561 cgcagctgct cttcgagcga ctggtcgccg cccttctgtt ccagccggcg cgcgagagcc
     7621 tcgagctcct tgtcgctcat ggggttgccg gtgccccccg agtcctggag gttcttgcgt
     7681 aagttttcgg ccagcttctt ccgctcgtcc tcgctgagct tcttgagcgc gcgctcgagc
     7741 gcctccgaga gtttcttttg agcttcggcg ctgcccgagc gcttcagctc gcgcagtgcc
     7801 tgcttgccgt cgtcgtcgag ggcgccgccg agacgcccgg cgagctcgcg tagcgcgtcg
     7861 agcttcgatt cggcgcgttc gagcgcggcc ttctgacgct cgagcgtttc ggcgaggccc
     7921 ttggcgcctt tgtcgcgtgc agccttggcg gcgtcctcga gcgtctgctt ggcggcttcg
     7981 cggtcgcgtt tctccgtgag cgtggcgagg cgctgcatct cggcgtcgaa cgcggtgaga
     8041 tcgccgtcgc cgagcgcgcg cgccgccttg gacgtgagct cgttgtgcga cagctcgttg
     8101 acggcggcgt cgagcccggc gc
//
LOCUS       DATIML010000485         6091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1255112, whole genome shotgun sequence.
ACCESSION   DATIML010000485 DATIML010000000
VERSION     DATIML010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6091
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1255112"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..1962
                     /gene="lepA"
                     /locus_tag="VLJ38_08435"
     CDS             157..1962
                     /gene="lepA"
                     /locus_tag="VLJ38_08435"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HSU39581.1"
                     /translation="MPTDPSRIRNFSIIAHVDHGKSTLADRILDVTGAITEREKVNQF
                     LDKLELERERGITIKAQSVRLKYRALDGKDYQLQLIDTPGHVDFNYEVSSSLRACEGA
                     LLVVDATQGVQAQTVANAYLAISNSLEIIPVLNKIDLPSSNVDHSAEQIEEVIGIDCS
                     GALFASGKTGQGVREVLEAVVARIPSPKGDAAAPLRALLFDSWYDSYRGAVVMLRVME
                     GTLKKGEKIKFMATGRVYEVTEIGAFTPHAAALEELGVGEVGFVACNVKSTEDTKIGD
                     TVTHATRPAAEPLPGFREVKPMVFAGIYPTDSAEYENLRDALAKLRLNDASFQFEPDT
                     SDALGFGFRCGFLGLLHMEIIQERLEREYNLDLITTAPSVVYFAHKKDGVVVRVDNPS
                     KMPPVGELESIEEPMLKLTVHVPAEHVGAVVSLCEERRGVQLGIHYATKDHVVVTYEL
                     PLAEVILDFHDKLKSVSRGYASMDYELTGYKADDLVKLDLLLNGEPLDALSVIVHREN
                     SYSRGRALAAKLKELVPRQQYEVAIQAAIGSKVISRETVRAMRKDVTAKCYGGDISRK
                     RKLLEKQKEGKKRMKAVGNVEVPQEAFLAILKLDG"
     gene            2053..3420
                     /locus_tag="VLJ38_08440"
     CDS             2053..3420
                     /locus_tag="VLJ38_08440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSU39582.1"
                     /translation="MASNRAARLAQLNAKALEFGTVTHVETVPFGGRLKVERFRLKNG
                     LELLTCEDRSAPVVAYHTWFRVGSRHEREGKTGLAHLFEHLMFNEVEGRASGEFDRLL
                     EEAGAESNASTWLDWTQYNIAIPKEKLGLVIGLEAERMSRLVLREPQVTSEKEVVANE
                     RRFRVDDDVEGAVSELLWATAFDRHAYRWPTIGWMKDIEGFTTDDCAEFYRTYYAPNN
                     ATIIVTGDFTEASLLEKVSAAYGKIPPSTLPVENYQAEPPQTSERRREVKKPTPTEKL
                     AIGYHSPALGDFDHLSLSLLVDVLFGGRASRMHQNLVRKQELAADVRASVGPFRDPGL
                     FEVFASARDGHRAEELLSAIDHELERAREEPISDEEIERARARTELGLIAGLETAEGK
                     ASTIGFYETVLGRPAAAFERLDAIRRLGPSDLIRAARRYFSESSRSVIFVRAELAGAA
                     QKAAE"
     gene            3417..4727
                     /locus_tag="VLJ38_08445"
     CDS             3417..4727
                     /locus_tag="VLJ38_08445"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSU39583.1"
                     /translation="MSQANVVVTPEPNVLVETSHDLPLVAVSVALRMGALEDPADAEG
                     SVRLLGRLMRRSAGGRSAEANDALIEGMGAALGADVTQSTVSFHGSVITRSLDRFGEF
                     LIDALARPALPEDELARLKRETLAELMETLDDDRSLARRWFRKTIFAGHPYGRSAGGT
                     KAGIEHATLDGLRALYRRLVVPENLVVALAGDVTPERAARFATELASALKRGERLVDR
                     TPDPTVRAGRHLVVVDKPERTQTQIIIGGLGSHPADPDHFALSVANTAFGGTFTARLM
                     QEVRVKRGWSYGAYSSLPFDRRRQAFSMWTFPKASDAAACIALELDMLEKLRRDGLKK
                     SELAWAKRYLLRSHAFAIDTAGKRVGLKLDSTLYDLPAGYFDNYTENLRAVTLEQANQ
                     ALRERLSDENLLVTLVGTEAVVGKDVREAIPRLATSDVVRYDAE"
     gene            complement(4741..5115)
                     /locus_tag="VLJ38_08450"
     CDS             complement(4741..5115)
                     /locus_tag="VLJ38_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39584.1"
                     /translation="MWASAQHNVRVSGLPVAEAVRGVLDRAASTPPSVLGVRRVLGVR
                     DYRRTATEQPRWLGAAPLVELELEGGRILLRPSGTEPKLKFYVDLSAELPRGAAVSGV
                     ENELAAEASALARELVEKLGLA"
     gene            complement(5395..>6091)
                     /locus_tag="VLJ38_08455"
     CDS             complement(5395..>6091)
                     /locus_tag="VLJ38_08455"
                     /inference="COORDINATES: protein motif:HMM:NF014878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HSU39585.1"
                     /translation="VARALHASAAIVVTASHNPRTDNGYKLYLHDAVQLTAPYDEAVE
                     RAIEHVGPAASVPRASLSTQDAVPAPWRSEIEALDVNAWFERYLSEVLASLGPRRALP
                     LRIAYTPLHGVGWRFARRALECAGYADVRVVPQQAEPDGAFPSAPFPNPEEPATLELA
                     LEFAAAEQADVLIANDPDADRVAVAVPTPSGRWQRLSGNQVGALLADARLPLVTPGTR
                     TSARPLALTSVVT"
BASE COUNT         1076 a         2068 c         2021 g          926 t
ORIGIN      
        1 tacgaggact ccctgcccgg gcagcgcacc ctcgaggcag ctcaggtaaa agaagccgcg
       61 cgtcccgcca agaagtaagg cccgagcccg cgggaccccg ctcaggccgc agctagtgct
      121 atccagcggc gccgcgttcg cccggcgctc acgctcatgc cgactgatcc cagccgcatc
      181 cggaattttt cgatcatcgc ccacgtcgac cacggaaaat cgacgctcgc cgatcgaatc
      241 ctggacgtca cgggcgcgat caccgagcgc gagaaggtca accaattcct cgacaagctc
      301 gagctcgaac gcgagcgcgg catcacgatc aaggcgcagt cggtgcgcct caaataccgg
      361 gcgctcgacg gcaaggatta tcagctccag ctcatcgaca cgcccggcca cgtcgatttc
      421 aattacgagg tatcgagcag cctgcgcgcg tgcgaagggg cgctcctcgt cgtggacgcg
      481 acgcaaggcg tccaggcgca aaccgtcgcg aacgcgtacc tcgcgatctc caattcgctc
      541 gagatcatcc ccgtcctcaa caagatcgat ctgccctcgt cgaacgtcga tcattccgcc
      601 gagcaaatcg aggaagtgat cggcatcgac tgcagcgggg ccctctttgc gagcggcaaa
      661 acgggccagg gcgtgcgcga ggtgctcgag gcggtcgtcg cgcgcattcc gtcgccgaaa
      721 ggcgacgcag cagcgccgct gcgcgccttg ctcttcgaca gctggtacga cagctaccgc
      781 ggtgcggtcg tcatgctgcg cgtcatggag ggcacgctca agaagggcga aaagatcaag
      841 ttcatggcca cggggcgcgt ctacgaggtg accgagatcg gcgcctttac gccgcacgct
      901 gcggcgctcg aggagctcgg cgtcggcgag gtcggcttcg tcgcctgcaa cgtgaagagc
      961 accgaggaca cgaaaatcgg cgacaccgtc acgcacgcga ctcgcccggc cgccgaaccc
     1021 ctgcctggct ttcgcgaagt gaaaccgatg gtgttcgcgg gcatctaccc gacggactcg
     1081 gccgaatacg agaacctgcg cgacgcgctc gccaagcttc ggctgaacga cgcttcgttc
     1141 cagttcgagc ccgacacgtc cgacgcgctc ggcttcggct ttcgctgcgg cttcctcggc
     1201 ttgctgcaca tggaaatcat ccaggagcgg ctcgagcgcg aatacaacct ggatctcatc
     1261 acgaccgcgc cgagcgtcgt ctacttcgcg cacaagaagg acggcgtggt ggtgcgcgtc
     1321 gacaatccat cgaagatgcc gcccgtgggc gagctcgaga gcatcgagga gccgatgttg
     1381 aagctcacgg tgcacgtgcc ggccgagcac gtgggcgccg tggtctcctt gtgcgaagag
     1441 cgacgcggcg tgcagctcgg catccattac gcgacgaaag atcacgtcgt cgtcacctac
     1501 gagctgccgc tcgcggaagt gatcctcgac tttcacgaca agctgaagag cgtgtcgcgc
     1561 ggctacgcga gcatggacta cgagcttacc ggctacaaag ccgacgatct cgtcaagctc
     1621 gacttgctgc tcaacggcga gccgctcgac gcgctcagcg tgatcgtgca ccgcgaaaac
     1681 tcctactcgc gcggccgtgc gctcgccgca aagctgaagg agctcgtgcc gcgacagcag
     1741 tacgaggtcg caattcaggc cgccatcggc tccaaggtga tcagccgcga gaccgtgcgg
     1801 gccatgcgca aggacgtgac cgccaagtgc tacggcggcg acatctcgcg caagcgcaag
     1861 ctcctcgaga agcaaaaaga gggcaaaaag cgcatgaagg ccgtcggcaa cgtcgaggtg
     1921 ccgcaagagg cgttcctcgc cattctgaag ctcgacggct gaatcccggc gcgccgaccg
     1981 aacgtgcgcc gagcgccgag ccccgcggct tcttcgggtg agctcgcccg cggtctgcgc
     2041 taaggtcggt tcatggcgtc gaatcgggcc gcacggctcg cccagctgaa cgcaaaggcc
     2101 ctcgagtttg gcaccgtcac gcacgtcgag acggtgccgt tcggcggccg cctcaaagtc
     2161 gagcgctttc gcctcaagaa cggcctcgag ctactcacct gcgaggaccg ttcggcgccc
     2221 gtcgtcgcct accacacgtg gtttcgcgtg ggctcgcgcc acgaacgtga gggcaagacg
     2281 ggacttgcgc atcttttcga gcacctcatg ttcaacgagg tcgaggggcg cgcctccggt
     2341 gaattcgatc gcctgctcga ggaagccggc gccgagagca acgcttccac ttggctcgac
     2401 tggacgcagt acaacatcgc cattcccaag gaaaagctcg ggctcgtgat cgggctcgag
     2461 gccgagcgca tgtcccgcct cgtcttgcgc gagccgcaag tgacgagcga aaaagaggtc
     2521 gtcgccaacg aacgccgctt ccgcgtcgac gacgacgtcg aaggtgcggt gagcgagctc
     2581 ttgtgggcca ccgccttcga tcgccacgcc taccgctggc cgaccatcgg ctggatgaag
     2641 gacatcgagg gcttcacgac cgacgactgc gcggaatttt atcggacgta ctacgcgccg
     2701 aacaacgcga ccatcatcgt gacaggcgac tttaccgaag cgtcgctgct cgagaaggtc
     2761 tccgccgcct acggcaagat cccgccgagc acgctgcccg tcgagaacta tcaggccgaa
     2821 ccgccgcaaa ccagcgagcg gcggcgcgag gtcaagaagc cgacgccgac ggaaaagctc
     2881 gcgatcgggt atcactcccc cgccctcggc gacttcgacc acctgtcgct gtcgctgctc
     2941 gtcgacgtgc ttttcggcgg tcgcgcgagc cgcatgcacc agaacctggt gaggaaacag
     3001 gagcttgcag ccgacgtgcg cgcgtcggtc ggccccttcc gcgacccggg gctgttcgag
     3061 gtgttcgcct cggcccgtga cggtcatcgc gccgaagagc tactcagcgc gatcgatcac
     3121 gaactcgagc gcgcacgcga ggagcccatt tcggatgagg agatcgagcg ggcacgcgcg
     3181 cgcaccgagc tcggtctcat cgccggactc gagacggccg agggtaaagc ctccacgatc
     3241 ggcttctacg aaacggtgct cggccgaccg gcggccgcgt tcgaacggct cgacgccatt
     3301 cgacggctgg gaccgagcga cctcatacgg gcggcgcgcc gctatttttc cgagtcgtcg
     3361 cggagcgtca tcttcgtgcg cgccgagctc gcgggcgcag cccagaaggc agcagaatga
     3421 gccaagcgaa cgtcgtcgtc acgcccgagc cgaacgtgct ggtcgagacc agccacgact
     3481 taccgctcgt cgcggtgagc gtcgccttgc gcatgggcgc gctcgaggat ccggcggacg
     3541 ccgagggttc ggtgcgcttg ctcggacgac tgatgcggcg gagcgccggc ggccgctcgg
     3601 cggaggcgaa cgacgcgctg atcgagggca tgggcgccgc cctcggcgcc gacgtcacgc
     3661 agagcacggt ttcctttcac ggcagcgtca tcacgcgctc gctcgatcgc ttcggggaat
     3721 ttttgatcga cgcgctggcg cggccggcgc tgccggaaga cgagctcgcg cgactcaaac
     3781 gcgagacgct cgccgagctc atggagacgc tcgacgacga tcggagtctc gcgcgccgtt
     3841 ggttcaggaa gacgattttc gcgggacacc cgtacggccg ctcggcgggc ggcaccaagg
     3901 cgggaatcga gcacgcgacg ctcgacggct tgcgcgcgct ctaccggcgc ttggtcgtcc
     3961 cggaaaattt ggtggtggct ctcgcgggcg acgtgacgcc ggaacgcgcc gcgcgcttcg
     4021 cgacggagct cgcaagcgcg ctaaaacgcg gcgagcgcct cgtcgatcgc acgcccgatc
     4081 ccacggtgcg tgccggacgc catctggtcg tggtcgacaa gccggaacgc acgcaaactc
     4141 agatcatcat cggcggcctc ggcagccacc ctgccgatcc ggaccatttc gcgctttccg
     4201 tcgccaacac ggcgttcggc ggcacattca ctgcgcgcct catgcaggag gtccgcgtca
     4261 agcgcggctg gtcgtacggc gcttactcga gcttgccgtt cgaccggcgg cgccaagcct
     4321 tcagcatgtg gacgtttccg aaggcatccg acgcggccgc ttgcatcgcg ctcgagctgg
     4381 atatgctcga gaagctccgg cgcgacggac tcaagaaaag cgagctcgcg tgggcgaaac
     4441 gctacctctt gcgctcgcac gccttcgcga tcgacacggc gggcaagcgc gtcggcctga
     4501 agctcgactc gacgctctac gatttgcccg cggggtactt cgacaactac acggaaaacc
     4561 tgcgcgccgt gacgctcgaa caagcgaatc aggcgctgcg cgagcgacta tccgacgaga
     4621 acttgctcgt cacgttggtg ggcaccgaag cggtcgtcgg caaggacgta cgcgaagcca
     4681 ttccacgcct cgcgacgagc gacgtcgtgc gctacgacgc cgagtgacgc tcgcttcgtc
     4741 tcaggcgagt ccgagcttct ccacgagctc gcgagcaagc gcgctggcct cggccgcgag
     4801 ctcgttttcg acgccactca cggccgctcc gcgcgggagc tcggccgaaa ggtcgacgta
     4861 gaatttgagc ttcggctcgg tgccgctcgg ccggagcaag atgcgcccgc cttcgagctc
     4921 gagctcgacg agcggcgccg cgccgagcca gcgcggctgt tccgtcgccg tgcgccgata
     4981 gtcccgcacg ccgaggacgc gccggacccc gagcacgctc ggcggcgttg acgctgcgcg
     5041 atcgagcacg cccctcaccg cttcggcgac gggcaggccg ctcacccgga cgttgtgctg
     5101 cgcgctcgcc cacacaccga actcgggagc gagcgcgtgc agtcgatcga gcagggtctg
     5161 accctgctca cggcagcgcg cggcgagatc ggcgagcgca atcgcggaag atatgccgtc
     5221 cttgtcgcgg acgagcggcg tgagcgcata gccgagcgct tcctcgcacg cgaacgcgaa
     5281 gcgtccctcc ccggcccgtt cgagcgcgag cgcggccgtc cacagccatt tgaagccggt
     5341 cagcgtgcgt tcgaagcgcg cgccgcgggc acgagcgatg gcttcgatga gcggctacgt
     5401 gacgacgctc gtgagcgcga gcggacgagc gctcgtccgc gtacccggcg tgacgagcgg
     5461 aaggcgagcg tcagcgagca acgcgccgac ttggttgcca ctgaggcgct gccagcggcc
     5521 gctcggcgtc ggaaccgcga cggccacgcg atcggcgtcc ggatcgttcg caatgagcac
     5581 gtccgcctgc tccgccgccg cgaattcgag cgcgagctcg agcgtggccg gctcttcggg
     5641 gttcggaaag ggcgcgctcg gaaacgcgcc gtccggctcc gcctgctgcg gcacgacacg
     5701 gacatcggcg tagcccgcgc actcgagcgc gcgtcgtgcg aagcgccaac cgacaccatg
     5761 caggggcgtg tacgcgatgc ggagcgggag cgcgcgccgt gggccgaggc tcgcgagcac
     5821 ctcgctcaag tagcgctcga accatgcgtt cacgtcgagt gcttcgattt cgctccgcca
     5881 cggcgctggg acggcgtctt gcgtcgacag cgaggcacgc ggcacgctcg cggccgggcc
     5941 cacgtgttcg atcgcgcgtt cgacggcctc gtcgtagggc gcggtgagct ggacggcgtc
     6001 gtgcagatag agcttgtagc cgttgtcggt gcgcgggttg tggctcgccg ttacgacgat
     6061 cgcggccgag gcgtgcaatg cgcgcgcgac g
//
LOCUS       DATIML010000486         4736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2985264, whole genome shotgun sequence.
ACCESSION   DATIML010000486 DATIML010000000
VERSION     DATIML010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4736
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2985264"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VLJ38_08460"
     CDS             <1..216
                     /locus_tag="VLJ38_08460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39586.1"
                     /translation="KKADADGAAAEAAAKQAAATPKLDAAKSAASATPVAPTVSPRPA
                     AAPHAVARETSRPSSATSGGRKIRTSL"
     gene            213..929
                     /locus_tag="VLJ38_08465"
     CDS             213..929
                     /locus_tag="VLJ38_08465"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HSU39587.1"
                     /translation="MSEPLAHAARGKLAVSEQFCSVQGEGASAGAPCVFLRLAHCNLR
                     CRWCDTKYSWDFAQFRFEDEVKVERTEAVAERITSEARGRLVVTGGEPLIQRAELEAL
                     FALLAPELVIEIETNGTLAPGARLLERVNQWNVSPKLANSGDPLEKRLRPDVLAVFSR
                     SERAYLKLVVADPSELAEVEALVSASEWPRERVLLMPQAATRLELSARGPLVRAAALA
                     RGLRYSSRLHVERWDGARGK"
     gene            complement(933..3230)
                     /locus_tag="VLJ38_08470"
     CDS             complement(933..3230)
                     /locus_tag="VLJ38_08470"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSU39588.1"
                     /translation="MICASELGCKKSPLPPPPAAAPALEAASGVAEPSAAPTADAPPG
                     PRRHESLIDRASSCEIEHHGRLLDLGVEGVSPWTGFRPTSPTADDLVIRDGNTYLETT
                     ARSLAYDLWLGHTLEHLRVTLRGRAGSARRVEMAIDGRRLGVVRLPESEARTFDFPEL
                     TGDLEPGLHHFGLRFAGAPRASRGVQAELDWLRVSGVDERRGDEGYAAPTLSDIVQNI
                     ALGNVPRRSLVLRAPTTVRCFVRPIAGTALKVGLGLWGTGRGAAELVVRRESGEPVTL
                     ETHRVAGGESSAWTELDVDLSRFAGEPVALELRAVDASRGGRVAFGDPQLIQHESQPP
                     TVEKARAVVLVVLSAVEQARVPPWGPTGALGTLGSLSREGAAFSRYRAPTTVPAGVMA
                     TLLSGLPPRAHGVEAPMLKLPASLRTLARLVKEANGSAAFFSSVPTTFAPFGFDASWD
                     AFEAFSPVKDIAATEPFTRGAAWLTRELDERPLARHLLVIHARGAHPPWDVTREEAQR
                     LKPPEYGGAIEPRRAAVILAALRARAGRGGKKLGDDDWVRLRELGDLALAKQDAGLAK
                     VTQALKKAGIWEQALVVVMGDTGPGATSELPFDPAGALSEERLAVPLLVKFPGNALAG
                     RDVPEAVTAEDVAATVARALDLGAPEWPATVDLLERATGGAAVERPAQHATLPGRYAT
                     RIGAWLLRGELGSRPRLCALDVDPACAQDVFEERTIAARTAWLATLLGEDSRVPKELG
                     SAPRTVAELDPDTRAALVVWGDIPP"
     gene            complement(3269..>4736)
                     /locus_tag="VLJ38_08475"
     CDS             complement(3269..>4736)
                     /locus_tag="VLJ38_08475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39589.1"
                     /translation="TADALLRLERVELDRELVQTYLACTPEPAASVTRRLLAGESPRE
                     LVLSASVSALMLEVVLSDIARRGAMLSAVTAPAGESSRPPVEEQSAPPLETNALSSLA
                     APLGAVGREAAFPASDAASGDATRSAQDATAALRVEGDAPNLPLDAELTPAVGGESEP
                     MLNFGSGTKTLEGVGDAGVQVEPSGSAALDPELGVGVLGLLGEAAADADGTESASPNG
                     TSAPVKHADAAAASSTAGGDSDAPPSSGSQAAASLPPTTSRSGEIGDPDTSPAIPAAK
                     RRDTPKAPKSPASDPSASGAKAPDSTDSRREGTKHGTPSSAPGAALAKAPAHDATAKK
                     GGTGTLLLRSVAAGGIAFFITTWLIVPMFSGDKDKEPAPPVEKTVAAPAAVEPAAPAP
                     TAALSVEDLELPRGMEVAPEQGIIEVETNGPDPIYVDEAFVGVGPVRRVAAAAGTHHV
                     EVRGEKPAGPLTLTLVAGRRAHVKAAGSPAAAPPASAQ"
BASE COUNT          685 a         1725 c         1666 g          660 t
ORIGIN      
        1 aagaaggcgg atgctgatgg cgcggcggcc gaggccgctg ccaagcaggc ggccgcgact
       61 ccgaagctcg acgcggcgaa gagcgccgcg tccgccacac ccgtcgctcc caccgtctcg
      121 ccgcggcccg cggcggcccc gcacgccgtg gcgcgcgaaa cctcgcgacc gagctccgcc
      181 acttcgggtg gtcgcaagat ccgcacgtcg ctgtgagcga gccgctggcg cacgccgcgc
      241 gaggaaaact cgcggtttcc gagcagtttt gcagcgtgca gggcgaaggc gcgagcgcgg
      301 gcgcgccgtg tgtctttctg cgcctcgccc attgcaatct gcgctgccgc tggtgcgaca
      361 ccaagtacag ctgggacttc gcgcagtttc gtttcgaaga cgaggtcaag gtcgagcgga
      421 ccgaagcggt cgcggagcgc atcacgtccg aggcccgagg tcgtctcgtc gtgacaggcg
      481 gtgagccgct catccagcgc gccgagctcg aggcgctctt cgcgctgctc gcgccggagc
      541 tcgtgattga gatcgagacg aacggtacgc tcgcgccggg cgcgcggctg ctcgagcgcg
      601 tcaatcagtg gaacgtatcc cccaagctcg caaacagcgg cgatccattg gaaaaacggc
      661 tgcggcccga cgtgctcgcg gtcttttcgc ggagcgagcg ggcatacctg aagctcgtgg
      721 tggccgatcc gagcgagctc gccgaggtgg aagcgctcgt cagcgcgagt gaatggccgc
      781 gcgaacgcgt cctgctcatg ccgcaagcgg cgacacgcct cgagctttcc gcgcgcggtc
      841 cgctcgtgcg cgccgctgcg ctcgcgcgcg ggctccgcta ctcgtcgcgc ctgcacgtcg
      901 agcgctggga cggcgcgcgc ggcaagtaag cgttacggcg gaatatcgcc ccaaaccacg
      961 agcgccgcgc gcgtgtccgg atcgagctcg gccaccgtgc gcggagcgga gccgagctcc
     1021 ttcggcacgc gtgagtcttc gccgagcagc gtcgcgagcc aagccgtgcg ggccgcgatc
     1081 gtgcgctctt cgaagacgtc ttgcgcgcag gcgggatcga cgtcgagcgc acacaggcgc
     1141 gggcgagagc cgagttcgcc ccggagtaac cacgcgccga tgcgcgtcgc ataacggccc
     1201 ggtaacgtcg cgtgctgcgc ggggcgttcg acggcggctc cgcccgtcgc gcgctcgagg
     1261 agatcgaccg tcgcgggcca ttcgggcgcg ccgagatcga gcgcgcgagc gaccgtcgcc
     1321 gccacgtctt ccgccgtgac cgcttcgggc acgtcccgtc ccgccagcgc attgccggga
     1381 aatttcacga gcaacggcac ggcaagccgc tcttcgctga gcgcgccggc cggatcgaac
     1441 ggcagctccg aggtagcacc cgggcccgtg tcgcccatca cgacgacgag cgcctgctcc
     1501 caaatgccgg cctttttgag cgcctgcgtc accttggcaa gcccggcgtc ttgcttggcg
     1561 agcgcgagat cgccgagctc gcgcaggcgc acccagtcgt cgtcgccgag cttcttcccg
     1621 ccgcggcccg cgcgcgctcg gagcgccgcc aaaatcacgg ccgcgcgtct gggttcgatg
     1681 gcgccgccgt actcgggcgg cttcaggcgc tgcgcctctt cgcgcgtgac gtcccaaggc
     1741 gggtgggcgc cgcgcgcgtg aatgacgagc aggtgccgcg cgagggggcg ctcgtcgagc
     1801 tcgcgcgtga gccacgccgc accacgggtg aacggctccg tggcggcgat gtctttgacc
     1861 ggagaaaacg cctcgaaggc gtcccagctc gcatcgaagc cgaaaggcgc gaacgtcgtc
     1921 ggcacgctgc tgaaaaaggc cgcgctcccg ttcgcctcct tcacgaggcg cgccagggta
     1981 cgcagcgagg ccggcagctt caacatcggc gcctcgacgc cgtgcgcgcg cggcggcagc
     2041 ccactcaaga gcgtcgccat gacgccggca gggacggtcg tcggcgcgcg atagcgactg
     2101 aaggccgcgc cctcgcgcga gaggctcccc agagtcccga gcgccccggt ggggccccac
     2161 ggcggcacac gcgcctgctc cacggccgag agcacgacca acacgacggc gcgtgccttc
     2221 tccaccgtgg gcggctggct ttcatgctga atcaactgcg gatcgccgaa cgctacccgg
     2281 cccccgcgcg acgcgtccac ggcgcgaagc tcgagcgcca ccggctcgcc cgcgaaacgc
     2341 gagagatcga cgtcgagctc ggtccacgcg ctcgattctc cgccggcgac acgatgcgtc
     2401 tcgagcgtca ccggctcgcc gctctcacgc cgaacgacga gctcggccgc gccgcgcccg
     2461 gtgccccaga gcccgagccc gactttgagc gccgtgcccg cgatgggacg cacgaagcag
     2521 cgcacggtcg tcggcgcgcg cagcacgagc gaacggcgtg gcacgttacc gagcgcgatg
     2581 ttctgcacga tgtccgacag cgtcggcgcc gcgtagcctt catcgccgcg ccgctcgtcg
     2641 accccggata cgcgcagcca atcgagctcg gcctgcacgc cccgcgacgc ccggggcgcg
     2701 cccgcgaagc gcaggccgaa gtggtgcaag cccggctcga gatcgcccgt gagctcggga
     2761 aaatcgaagg ttctcgcctc gctttcgggc agccgcacga ccccgagtcg acggccgtct
     2821 atcgccatct cgacgcgccg cgcggagcca gcgcgaccgc gcagggtcac gcggaggtgc
     2881 tcgagcgtgt gaccgagcca caggtcgtac gcgagagagc gcgcggtcgt ctcgaggtac
     2941 gtgttgccgt ctcggatcac gaggtcatcg gccgtcgggc tcgtgggacg aaaccccgtc
     3001 cagggcgaca ccccttcgac gccgagatcg agtagccggc catggtgctc gatctcgcag
     3061 ctcgatgcgc ggtcgatgag cgactcgtgg cggcgaggtc cgggcggcgc gtctgcggtc
     3121 ggagcggcgc tcggttcggc tacgccgctc gctgcctcga gtgccggggc agccgccggc
     3181 ggcggcggca gcgggctctt cttgcagccg agctccgaag cgcaaatcac ggcgattaac
     3241 gccgcgcgca atgccgagga ccggcgcatc attgcgcgga ggcgggcggt gccgcagcag
     3301 gcgaaccggc ggccttcacg tgcgcgcggc gcccggccac gagcgtcagc gtcagcgggc
     3361 ccgctggctt ttcgccgcgc acctcgacat ggtgcgtccc ggcggccgcc gccacgcggc
     3421 ggacggggcc gacgccaacg aacgcctcat ccacgtaaat gggatcggga ccgttcgtct
     3481 cgacctcgat gatgccctgc tcgggcgcaa cttccatccc gcgcggcaac tccaaatctt
     3541 cgacactgag tgccgcggtc ggggccggcg ccgctggctc gaccgcagcc ggtgccgcca
     3601 cggtcttctc gacgggcggt gccggctcct tgtccttatc gcccgaaaac atcggcacga
     3661 tgagccaagt cgtgatgaaa aacgcgatgc cgccggccgc gacggagcgc aacaagagcg
     3721 tcccggttcc gccttttttc gcggtcgcgt cgtgcgcggg cgctttggcg agggcggctc
     3781 cgggcgccga gctcggcgtt ccatgcttcg tcccctcgcg tcgcgagtcc gtgctgtccg
     3841 gcgccttcgc gccactcgcg ctcggatcgg aggccggcga tttcggcgcc ttcggcgtgt
     3901 cacggcgctt ggcagcgggg atggccggcg atgtatcggg gtcgccgatt tcacccgagc
     3961 gtgacgtggt gggcggcagc gatgccgcgg cttgcgatcc cgacgacggc ggagcgtccg
     4021 agtcgccccc cgcagtgctc gacgcagccg ccgcatcggc gtgcttcacc ggcgcactgg
     4081 tgccgttcgg tgaggccgac tccgtaccgt ctgcgtccgc cgcggcttcg cccaacaaac
     4141 cgagcacgcc cacgccgagc tcggggtcca gcgcggccga gccactcggc tcgacttgca
     4201 ccccggcgtc gccaacgccc tcgagcgtct tcgtgccgct gccgaagttc agcatcggct
     4261 ccgattcgcc gcccaccgcc ggcgtgagct cggcgtcgag cggcaggttc ggcgcgtcac
     4321 cctcgacgcg caacgcagcc gtggcgtctt gcgcggacct cgtggcgtcg ccggatgctg
     4381 cgtcgctcgc cggaaaggca gcttcgcggc cgacagcgcc gagcggcgcc gccagagacg
     4441 acagcgcatt cgtttcgaga ggtggggcgc tctgttcctc gaccggtggc cggctgctct
     4501 caccggcagg cgccgtgacg gccgagagca tagcgccccg gcgcgcgata tcggacagca
     4561 ccacctcgag catcagtgcc gacacggacg ccgagagcac gagctcgcgc ggcgattcac
     4621 cggcgagcag ccggcgcgtc accgacgctg cgggctccgg cgtgcacgcg aggtaagtct
     4681 gcacgagctc tcgatcgagc tcgacgcgct cgagccggag caacgcgtcc gccgtg
//
LOCUS       DATIML010000487         3755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4721057, whole genome shotgun sequence.
ACCESSION   DATIML010000487 DATIML010000000
VERSION     DATIML010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3755
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4721057"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2399
                     /locus_tag="VLJ38_08480"
     CDS             <1..2399
                     /locus_tag="VLJ38_08480"
                     /inference="COORDINATES: protein motif:HMM:NF016736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HSU39590.1"
                     /translation="PLPETNRPGLNQIRYRAGTYASFLTTMLERIGSVTVPDAVRPLA
                     SLTTRASDDPAIALLDLWAYVGDILTFYQERFANEAFLRTAREEQSVTWLAALLGYRP
                     APGAAAQTYVAFTLEPGKSVEIPVGLRVQSVPGQHEEPQKFETVETLPAVAALNAMGL
                     KTTRPLALSNTTQHLVLVGTNLGLVPGNYLLVVGDERLGNPDSERWDVRRIDAVSVDG
                     ARGTTRVEWNEPLGGGSAVPEPPTNAKAYVFREQAWPFGYNAPLFSLVGGVLGEIASW
                     EDDALGSPLDLDNLYKRVARGDFFALVSPGRPRSTSGGSFPPYVELYRASDVVDTVRS
                     GYTLSSKVTRITPDTSVHLDLFPVRGTQILLRPEELTIAEEPLTSPLEGDELVLDGLF
                     PDVTPRRTLIVTGTDAAGNARSEVVVVRGASLDAGASTTTLELALALAASYVRTSVQV
                     LGNVAFATHGETVRDETLGDGDATAVFQDFSLSRKPVTFVHDGTAPHGVRSTLALSVA
                     GVLWQEDEELFDHGPTDSVYVTRRDVAGTLHAEFGDGVTGARLPTGNGNVVVSYRRGL
                     GLAGNVRAGTLTTLLDRPPGLRSATNPAPADGGDDADPPELTRENTPNGVRTLGRIVS
                     LRDFEDAAREVAGVRYARATAGVVAPTFEPQVDLTVLGAGGAALSQQTLASVATYLAA
                     RRDGNRRLRLALGTAVPVRIALRCWLDPRYDPDAVMLAARARLSAWIGSLGLGEGLHT
                     SRAYAVLADLPGLTASLVESFARRSGTPPPGPVLVIQPNELALLEHPETDVVVTRVSA
                     "
     gene            2396..>3755
                     /locus_tag="VLJ38_08485"
     CDS             2396..>3755
                     /locus_tag="VLJ38_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39591.1"
                     /translation="MTEPLDLYELLPNVHRLRDAERGYPLRALLALVSEQANVIRADI
                     DRLENDLFIETCAEWVVPYIGDLVANQPLYEIVQPRRADVANTIAYRRRKGTHAMLER
                     LASDVTGWSTCVVEFFERLGWTQNQNHLRPSSQWFDLRRQEACTRVGGAFESASRSVD
                     VRPLGQDEGWFGVPKLGFFLFRSLALPVVAVPARPSAVPWGFRFDPTGARGPLFQRAR
                     TPTGRVTELDVAAPIRRERFFVDLEAAREATPPAAASELYGDFAAGPTAEAHASLHVM
                     VGGVAVPASRVVCARLFPWPASPVSGDAVAVDVEHGRLALGAAWPSPAPPVDVSFHRG
                     VPAPLGGGSYARTPVTDPNATALRVREGATPTGPSGPYPSLDAALAVWRATTPPVNTV
                     IRIDDSRTYPLTGPLAVAPACSLVIEAAPGERPLLVTGSGGVSAGSPALAPLSALRFD
                     GVA"
BASE COUNT          512 a         1371 c         1293 g          579 t
ORIGIN      
        1 ctccgctgcc ggagacgaat cgccccggct tgaaccaaat acgctatcgc gcgggcacct
       61 acgcgagctt cctcacgacg atgctcgagc gcatcggcag cgtcacggtc ccggacgccg
      121 tgcgaccgct cgcgagtctc acgacgcgcg ccagcgacga cccggccatc gcgctgctcg
      181 atctgtgggc ctacgtcggc gatatcctca ccttctacca ggagcgcttc gcgaacgaag
      241 cgttcctgcg gaccgcgaga gaagagcaat cggtcacctg gctcgcggcg ctgctcggct
      301 accgtccggc ccccggcgcc gccgctcaga cgtacgtcgc cttcacgctc gaaccgggca
      361 agagcgtcga gatcccggtc ggcctgcgcg tgcagagcgt gcccgggcag cacgaggagc
      421 cgcaaaagtt cgagaccgtg gaaacgctcc ctgccgtcgc ggccctcaac gccatgggcc
      481 tgaaaacgac gcggccgctc gcgctgtcca acacgaccca gcacctcgtg ctcgtcggga
      541 cgaacctcgg gctcgtgccg ggcaactacc tgctggtggt cggcgacgaa cgcttgggga
      601 acccggacag tgagcgctgg gacgtgcggc gcatcgacgc cgtgagcgtc gacggcgcgc
      661 gcggcacgac tcgcgtcgag tggaacgagc cgctcggcgg cggcagcgcc gtgcccgagc
      721 cgccgacgaa cgcgaaggcg tacgtcttcc gcgagcaggc ttggccgttc ggctacaatg
      781 cgccgctctt ttcgctcgtg ggcggcgtac tcggtgaaat cgcgagctgg gaagacgacg
      841 cgctaggctc gccgctcgac ctcgacaacc tctacaagcg cgtcgccagg ggggatttct
      901 tcgcgctcgt ttcgcccggc cgcccgagga gcacgtcggg gggctcgttc ccgccgtacg
      961 tcgagcttta ccgagcctcg gacgtcgtcg ataccgtccg ctcgggctac acgctctcgt
     1021 cgaaggtgac gcgcatcacg ccggacacga gcgtgcacct cgacctcttt cccgtgcgcg
     1081 gcacgcaaat cctgttgcgt cccgaagagc tcacgatcgc cgaggagccg ctcacgagcc
     1141 cgctcgaggg cgacgaactc gtgctcgatg ggctatttcc ggacgtgacc ccgcgccgca
     1201 cgttgatcgt gacgggcacg gacgctgctg gaaacgcgcg ctccgaagtc gtcgtcgtcc
     1261 gcggagcgtc actcgacgcc ggcgcgagca cgacgacgct cgaactcgcg ctcgctctgg
     1321 ccgcgagcta cgttcggacg agcgtccagg tgctcgggaa cgtcgccttc gccacgcacg
     1381 gcgagaccgt tcgcgacgaa accctcggcg acggcgacgc cacggctgtt tttcaggact
     1441 tctcgctgtc gcgcaagccc gtcacgttcg tgcacgacgg cacggcgccg cacggcgttc
     1501 ggagcacgct cgcgctcagc gtggccggcg tgctgtggca agaagacgag gaactcttcg
     1561 atcacggccc gaccgacagc gtgtacgtca cgcggcgtga cgtcgccggg acgctccacg
     1621 ccgagttcgg cgacggcgtc acgggggcgc gcttgccgac cggcaacggc aacgtcgtcg
     1681 tgagctatcg gcgcgggctc ggactcgcag gcaacgtgcg cgcgggtacg ctgaccacgc
     1741 tgctcgaccg tcccccgggc ctgcgatcgg cgacgaatcc cgcgcccgcc gacggcggcg
     1801 acgatgccga tccgcccgag ctcacgcgcg aaaacacgcc gaacggcgtg cgcacgctcg
     1861 gacgcatcgt ctcgctgcgc gacttcgagg acgccgcgcg cgaggtcgcg ggtgttcgct
     1921 acgcgcgggc gacggcgggc gtggtggctc cgacgttcga gccccaagtg gacctcaccg
     1981 tactcggcgc gggcggtgcc gcgctgtcgc agcagacgct cgcgtcggtt gcgacttatc
     2041 tcgccgcccg ccgtgacggc aatcgccgct tgcgcctcgc gcttggtacg gcggtgcccg
     2101 tgcgtatcgc gctgcgctgc tggctcgacc cgcgctacga ccccgacgcc gtgatgctcg
     2161 cggcgcgagc acgactgtcg gcctggatcg gctcgctcgg tctcggcgaa ggcctgcaca
     2221 cgagccgcgc gtatgcggtg ctcgccgatc tgccggggct cacggcgagc ctggtcgaat
     2281 ccttcgcgcg ccgttcgggc acgccgccgc ccggccccgt gctcgtgatt cagccgaacg
     2341 agttggcgct gctcgaacac cccgaaaccg acgttgtcgt cacgcgggtg agcgcatgac
     2401 cgagccgctc gatttgtacg agctcttgcc gaacgtccat cgcttgcgcg acgcggagcg
     2461 cggctacccg ctgcgcgccc tcctcgccct cgtgagcgag caggcgaacg tgatccgcgc
     2521 cgacatcgat cggctcgaga acgacctgtt catcgagacg tgcgccgagt gggtcgtgcc
     2581 gtatatcggc gacctcgtcg ccaatcagcc gctctacgag atcgtgcagc cgcggcgcgc
     2641 cgacgtggcg aacacgatcg cgtaccggcg ccgcaagggc acgcacgcga tgctcgagcg
     2701 gctggcttcg gacgtgaccg gctggtccac gtgcgtggtc gagttcttcg agcgcctcgg
     2761 ctggactcag aatcagaatc acctgcgtcc ctcgagccag tggttcgacc tcaggcgaca
     2821 ggaggcgtgt acgcgcgtcg gcggcgcgtt cgagagcgcg agtcgcagcg tcgacgtgcg
     2881 tccgctcggg caagacgagg gctggttcgg agtcccgaag ctcggttttt tcttgtttcg
     2941 ctcgttggcg ctgcccgtcg tcgccgtgcc ggcacgccct tccgccgttc cctggggttt
     3001 tcgcttcgat ccgacggggg cgcgcgggcc gctcttccag cgagcgcgca cgccgaccgg
     3061 gcgcgtcacc gagctcgacg tggcggcgcc gatccgccgc gagcgctttt tcgtggatct
     3121 cgaagccgcg cgcgaggcga ctccgcccgc ggccgcttcg gagctgtacg gcgatttcgc
     3181 cgcgggtccg accgctgaag cgcacgcgag tcttcacgtc atggttgggg gcgtggccgt
     3241 gccggcgtcg cgcgtcgtgt gcgcgcgcct atttccgtgg ccggcgtcgc cggtgagcgg
     3301 cgacgccgtc gcggtcgacg tggaacacgg ccggctcgcg ctcggcgccg cgtggccgtc
     3361 gcccgcgccg cccgtcgacg tgtcgtttca tcgcggcgtg cccgcgccgc tcggcggcgg
     3421 cagctacgcg cggacgcccg tcacggatcc gaacgcgacg gcgctgcggg tgcgcgaggg
     3481 agcgacgccc accggcccga gcggcccgta cccctcgctc gatgcggccc tcgcggtctg
     3541 gcgtgcgacg acgccgcccg tcaacacggt aattcgcatc gacgacagcc gcacgtaccc
     3601 gctcacgggt ccgctcgcgg tcgcccccgc ctgctcgctc gtcatcgaag ccgccccggg
     3661 cgagcgcccg ctgctcgtca cgggcagcgg cggtgtctcc gccggctcgc cggcactcgc
     3721 gccgctgtct gcgctgcgct tcgacggcgt cgcgc
//
LOCUS       DATIML010000488         2693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4428304, whole genome shotgun sequence.
ACCESSION   DATIML010000488 DATIML010000000
VERSION     DATIML010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4428304"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..356
                     /locus_tag="VLJ38_08490"
     CDS             168..356
                     /locus_tag="VLJ38_08490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39592.1"
                     /translation="MAQAVEAAPRVNDPKAVAILAKNIYREFRAGGFNERDVMALAGE
                     LLELVASDVRNERAVREG"
     gene            515..2302
                     /locus_tag="VLJ38_08495"
     CDS             515..2302
                     /locus_tag="VLJ38_08495"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU39593.1"
                     /translation="MISPASGAKAPAFSIVIHEKGGTERREVFDTTEVSVGRVQGNHI
                     VLPKGNVSKRHARLLYRDGRFIVTDLNSTNGTYVNRRRIAQATIVREGDRIYVGDFVL
                     RIEPSAESADVPAPDDPARSTARTDSSPASSPSQGAPPRSSHASFPEEALVRPTSIAV
                     DGATPQMATRGVPDSGELAAENTDLSDNVAMLVGRVAERLGSHDFRRPSDAALEQRVE
                     PLLRELWKLQEKELPGVEAERVIARARAELLELGPIGPLLADTSISEIGVPRFDRLVV
                     ARSGRPFGFEAGFSSELALTWALHRLCEQSGVPLRTDEVSAERRLPNGIVVEVSLGSG
                     LPHGSVLVLRRPRRSTLTLDELVRRGTISRAIAVFLQHCIAARLNLLVVGARDGGAET
                     LLGALSIVQAEGAGIWLVDGASPPFSAMARIDPRLTPERLHHAVRVAARLPSSRLIAD
                     MTSPGLALSIVDAIGEGADGIVASRFGVGLGRAFSRLVADLCRYSTSLTPVSARELVA
                     SSFDIAIEVAQQRDGRYRVVRVAEILGSNAQGIEHSDLFTFVADRTAAGGSIEGTFVP
                     TGSVAHISETLRARGIQLEAALFSRPLSR"
     gene            2499..>2693
                     /locus_tag="VLJ38_08500"
     CDS             2499..>2693
                     /locus_tag="VLJ38_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39594.1"
                     /translation="MSTGRILLDVTSESWRRLRHGGAPWALLALACSGTAKVTGQGGG
                     LDGSGGTGGTSATGGSGATGG"
BASE COUNT          417 a          894 c          907 g          475 t
ORIGIN      
        1 gttcaaccac ttttctcaat gcgcgtaagg acttgcactg gacgcgccct agttcgcggc
       61 ccagtgcgaa ttagtttgcg cagttcagcc ggtggagcca cgtaattttc cggtatttcc
      121 acgttagtgg agctggcatc aatcttgata gggcgacgcc gacacccatg gcacaagcag
      181 tagaagccgc tccccgcgtc aacgacccga aagcggtcgc tatcctcgcc aagaatattt
      241 accgcgagtt tcgcgccggt gggttcaacg aacgcgacgt gatggcgctc gcaggcgaac
      301 tgctcgagct cgtcgcaagc gacgtccgca acgaacgagc cgttcgcgag ggctgaagag
      361 ccgaatttcg cggcagcgag gggacgcggc cgacgacggg cgcgctcgga agggcgtgcc
      421 ccgtaccggt ccttgcgcgg aacgccggcc tttcgggcgg tggtgagcgc tgtgattgac
      481 agcaggggtc accattcgac aaggttaacg tgtcgtgatt tcgcctgctt ccggcgccaa
      541 ggcgcccgcc ttctcgatcg tgatccacga gaaaggcggg accgagcgtc gtgaggtctt
      601 cgacacgacc gaagtgagtg tcggccgtgt gcagggcaat cacatcgtat tgccaaaggg
      661 caacgtctcg aagcgacatg cgcggctgct ctaccgagac ggtcgcttca tcgtcacgga
      721 cctcaacagc acgaatggca cttacgtcaa ccggcgccgc attgcgcaag cgaccatcgt
      781 gcgcgaaggc gatcgcattt acgtcggcga cttcgtcctg cgcatcgaac cttccgcgga
      841 gtcggccgat gtgcccgcac ccgacgaccc ggcgcgcagc accgcgcgga cggattcgtc
      901 gcccgcgtcg tcaccgagcc agggcgcgcc gccccgctcc tcgcacgcga gctttcccga
      961 ggaggctctg gttcggccca cgtccattgc cgtcgacggt gccacgccgc aaatggccac
     1021 gcgcggcgtg cccgactccg gcgagctcgc tgccgagaac actgatctga gtgacaacgt
     1081 ggcgatgctc gtcggtcgcg tcgccgaacg cctcggatcg cacgatttcc gccgaccgag
     1141 cgatgccgcg ctcgagcagc gggtcgagcc tctcctgcgc gagctctgga agttgcaaga
     1201 aaaagagctc ccgggcgtcg aggcggagcg tgtcatcgcg cgcgcccgag ccgagctgct
     1261 cgagctcggg ccgatcggcc ccttgctcgc cgacaccagc atctccgaga tcggcgtgcc
     1321 gcgcttcgat cgcttggtgg tggcgcggtc gggccgcccc tttgggttcg aggcggggtt
     1381 ctcctccgag ctcgctctca cctgggcgct ccaccgactg tgcgaacaga gcggcgtgcc
     1441 gctgcgtacc gacgaagtgt ctgccgaacg gcgcctgccg aacggtatcg tggtggaagt
     1501 atcgctaggc agcgggctcc ctcacgggtc agtgctcgtt ctacgccggc cacggcggag
     1561 cacgctcacg ctcgacgagc tcgtgaggcg cggcaccatt tcacgcgcca tcgctgtctt
     1621 cttgcagcac tgcatcgccg cacgcctgaa cttgctcgtg gtcggcgcgc gtgacggcgg
     1681 agccgaaacg ctcctcggcg cgctatccat cgtccaggcg gaaggggcgg gcatctggct
     1741 ggtcgacggg gcgagcccgc ctttttcggc gatggcgcgc atcgatccgc ggctcactcc
     1801 cgagcggctg catcacgccg tgcgcgtggc ggcccgcctc ccgtcgtcgc gcttgatcgc
     1861 ggacatgact tcgccggggc tcgcgctctc gatcgtggac gcgatcgggg agggcgcaga
     1921 tggaatcgtg gcgtcgcgct tcggtgtcgg cctaggacgc gcgttctcgc gactggtcgc
     1981 cgacctctgc cgctattcga cgtcgcttac gcccgtgtcg gcgcgggagc tcgttgcaag
     2041 ctcgttcgat attgccatcg aggtcgcgca gcagcgagac ggtcgctacc gggtggtccg
     2101 cgtcgcggag atcctcggct cgaacgcgca gggtatcgag cattcggacc tgttcacgtt
     2161 cgtcgccgat cgtacggcgg ccggcgggag catcgaaggt accttcgtcc cgacgggcag
     2221 cgtcgctcac atctccgaga ccctgcgcgc gcggggcatc cagctcgaag ctgcgctgtt
     2281 ctcacgcccg ctctcgcgct gagacactcg tctcggtgtg gcggcgtttt cgccgcttga
     2341 gccgttgtgc gagccgttgc ccactaagca cgcgacgcgt tgattgatcc ttcgtgcgct
     2401 gcgcgccact gctcgcgacg cgctcgcgcg ggaaatttgt tgctgcaatg aaaccacgaa
     2461 tccccggcga acttcgcttg ctgcacgctg gacgcctcat gagcacgggg cgcatactcc
     2521 tcgacgtgac gagcgaatcc tggcgtcggt tgcggcatgg aggagcgcct tgggcgcttt
     2581 tggcattggc atgcagcggc acggcgaagg tgaccggcca gggcggggga ctcgacggca
     2641 gcggtgggac gggcggcacg agcgcgaccg gcggctcggg cgcgaccggc ggc
//
LOCUS       DATIML010000489         3777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_964416, whole genome shotgun sequence.
ACCESSION   DATIML010000489 DATIML010000000
VERSION     DATIML010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964416"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VLJ38_08505"
     CDS             complement(<1..358)
                     /locus_tag="VLJ38_08505"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSU39595.1"
                     /translation="MAPADRDGWLDVVLGQGELGDDGAALPRGCVPYLPCPVDALLRA
                     VEQVPVGAADVFVDLGSGAGRSLSLVHLLTGATAIGIEIQPELVRAARATAACLRLSR
                     VTTFEGDATSVTGAAAS"
     gene            986..2104
                     /locus_tag="VLJ38_08510"
     CDS             986..2104
                     /locus_tag="VLJ38_08510"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HSU39596.1"
                     /translation="MSGASGTTGTGGKTASGGASGMTSGVAPVISGGVRWFGRVDVSD
                     ASAQKFAWSGTGFAATVSGDSISVKLRSDGAADPIFFQPVIDGVAKDRVSVASADAVK
                     TLSLGTGLGSGDHTLFLYRETEGKSDYASSTFLGFASGTLKDPPAYSGRLIEIVGDSI
                     SAGYGDLGSEQHPNGGADPSGGCHFSTMTESAYVTYGAVAARALDADASIVAASGWGI
                     FTDNGGNANNVLPKVYANTVGGQASPAWSFAPKPQAVVINLGTNDFAANMSLGQSDFS
                     NAYTAFIATIRGKYPDALILCAVGPLLYGTGLTNATAYITAIVQSANQKGDQKVKLLN
                     FGSQDATKGTGCDWHPNATEQKRMADILTSELKSSLGW"
     gene            2165..3244
                     /locus_tag="VLJ38_08515"
     CDS             2165..3244
                     /locus_tag="VLJ38_08515"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HSU39597.1"
                     /translation="MELPVNPPVLPMLAKRVSALPDGEGFLFEPKWDGFRTLVFRDGA
                     ELFIQSRDEKPLNRYFPELVAVLTRALPERVVLDGEIVIEQRGVLDFDALQMRLHPAA
                     SRAKLLSEQTPASVVFFDILCEGDEDLRSAPFSERRARLEALAEKLAPPLYLTPATND
                     RALASDWFKRFEGAGLDGVMAKPLNGTYEPNQRVMFKVKHERDCDCVVAGFRWHKQGK
                     GTLVGSLLLGLFDASGALQHVGVCASFTNQKRRELVEFLAPYRENALENHPWRRWAEL
                     QNEFGGRMPGAQSRWSQGKDLSWEPLRTELVAEVAYDHMQSGRFRHTAQFRRFRSDKP
                     PAACTFEQLEVVPPEELSRIFQRPG"
     gene            complement(3270..>3777)
                     /locus_tag="VLJ38_08520"
     CDS             complement(3270..>3777)
                     /locus_tag="VLJ38_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39598.1"
                     /translation="ERWRTLGDPHAGIDRAVGSLDKLLELALADEAAGIGDAPWPPHF
                     RKMPNEGARVAPSRKKGTGVKRERMPLVTIANSPDKAAALAGLERWKSRHPEAAALLA
                     VDDVLVDAMRGRSSLWTRVRVNLRHVPLELRPAEEKPDPDDDPTRVWREAVAAHPELR
                     PRRVRPKP"
BASE COUNT          601 a         1254 c         1329 g          593 t
ORIGIN      
        1 cggacgcggc cgccccggtg acgctggtcg cgtcgccttc gaacgtcgtg acgcgggaca
       61 agcgcaagca agcggctgtt gcgcgcgccg cgcgtacgag ctccggttga atctcgatgc
      121 cgatcgccgt ggcgcccgtg agcagatgca ccaagctcag cgatcgcccg gctcccgacc
      181 cgaggtcgac gaagacgtcg gcggccccga cgggcacctg ctcgaccgca cggagcaatg
      241 cgtcgaccgg gcaaggaagg tagggcacgc acccccgcgg caacgcggcc ccgtcatcgc
      301 caagctcgcc ctgcccgagc acgacatcga gccaaccgtc gcgatcggcg ggagccacct
      361 ccagtagcga tgctcgaaaa ttcgccggtg catgcagtcc gcgctcgatg agcgagcgcg
      421 ttcgctcagc cgaagctcgg tcgcgcggct ccacgcttcg cagaggttaa tccgggcgcg
      481 gcttgtgcac gagcccaaac aagagctcac ggggccgaat acggtcaatg ggaaagcgag
      541 gtcgcctgct gcgccgttcc gatgggatcg tgcgtaggga tgagctacac tttccgcggt
      601 gcatgttcgt ggaccgcttt gctccattcg ctgggccctg atccttgcac ccaccgtcct
      661 gtcgcttgct tcggcgtgca gctcgggcac gcaggagccg ccgaaaggtc cggaccgtgc
      721 cggtgcatcg ggctctgtcg gcctggcagg tggcggggcc ggcgcgaacg gcggcgctgc
      781 gacggcgagc ggcggcgtcg gggcagctct cgcggccggc ggcgcagccg gtcgtcatga
      841 ctcgagcggc ggcgcgggcg tggcgaacgg agccggcggt tcgacgggtg gggtcgcgcc
      901 gggagcaggc ggcgcggcag cggggaaaag cggcgcttcg agtgctggcg gcgcggctac
      961 ggctggtaca gtcgggagcg gtggaatgag cggcgcgagt ggcacgacag gcacgggcgg
     1021 caagacggcg agcggcggcg cgagcggcat gacgagcggt gttgcgccgg tgatttcagg
     1081 cggcgtgcgc tggttcggcc gcgtcgatgt gtcggacgcg tcggcgcaga agtttgcgtg
     1141 gtccggtact ggctttgccg cgacggtcag cggcgactcg atctcggtca agctgcgctc
     1201 cgacggcgcc gccgatccca tctttttcca gccggtcatc gacggcgtcg ccaaggatcg
     1261 cgtgtcggtc gcgagcgcgg acgccgtgaa gacgctgtcg ctcggcacgg gcctcggctc
     1321 gggcgatcac acgctctttc tctaccgcga gacggaaggc aaatcggatt acgcgtcgag
     1381 caccttcctc ggcttcgcga gcggcacgct caaagatccc cccgcctaca gcgggcggct
     1441 gatcgaaatc gtcggagact ccatcagcgc gggctacggt gatctcggca gcgagcagca
     1501 tccgaacggc ggcgcggatc cgagcggcgg ctgtcacttc tcgaccatga ccgagagcgc
     1561 gtacgtcact tacggcgccg tcgctgcgcg tgctctcgac gccgacgcga gcatcgtcgc
     1621 ggcgtcgggc tggggcatct tcaccgacaa cggcggcaac gcgaacaacg tcctaccgaa
     1681 ggtgtacgcc aacaccgtgg gcggccaagc gagccctgcg tggagctttg ctcccaagcc
     1741 gcaagccgtg gtcatcaatc tcggcacgaa cgacttcgcc gccaacatga gcctcggtca
     1801 gagcgatttc tcgaacgcgt acacggcgtt catcgcgacc attcgcggca agtaccccga
     1861 cgcgctcatt ctgtgcgccg taggtccgct gctctacggc acgggcctca cgaacgcgac
     1921 tgcgtacatc accgccatcg ttcagagcgc gaaccaaaag ggcgaccaaa aggtcaagct
     1981 cttgaacttc ggcagtcagg acgcgaccaa ggggaccggc tgcgattggc atccgaacgc
     2041 gacggagcag aagcgcatgg ccgatatcct cacgagcgag ctcaagtcga gtctcggctg
     2101 gtgagcggcc gacgctcgcc gcgcttcgcg agtccccgcc gggttatggg ctaagcttct
     2161 cggcgtggag ctgccggtca atccgcccgt cttgccgatg ctcgccaagc gcgtgagcgc
     2221 gctgcccgac ggtgagggct tcctgttcga gccgaaatgg gacggctttc gcacgctcgt
     2281 gtttcgcgac ggcgccgagc tcttcatcca gagccgcgac gaaaagccgc tgaaccgtta
     2341 cttccccgag ctcgtcgcgg tgctcacgcg ggcgttgccc gaacgcgtcg tactcgacgg
     2401 cgagatcgtc atcgagcagc ggggcgtgct cgatttcgac gcgcttcaaa tgcgactgca
     2461 ccccgcggcc tcgcgcgcga agctcttgag cgagcagacg ccggcgtccg tcgtcttctt
     2521 cgacatcttg tgcgaaggcg acgaggacct caggagcgcg ccgttttcgg agcgtcgcgc
     2581 gcggctcgaa gcgctcgccg aaaagctcgc gccgccgctc tacctcacgc ccgcgacgaa
     2641 cgaccgcgcg ctcgcgagcg attggttcaa gcgcttcgaa ggcgcggggc tcgacggggt
     2701 gatggcgaag cctttgaacg gcacgtacga accgaaccag cgcgtcatgt tcaaggtcaa
     2761 gcacgagcgt gactgcgact gcgtcgtcgc ggggtttcgc tggcacaagc agggcaaggg
     2821 caccctggtg ggctcgctct tgctcggtct cttcgacgcg agcggagcgc tccagcacgt
     2881 cggagtgtgc gcgagcttca cgaaccaaaa gcgccgcgag ctcgtcgagt ttctggcgcc
     2941 ctaccgcgaa aacgcgctcg aaaaccatcc gtggcggcgc tgggcggagc tgcagaacga
     3001 attcggcggt cgcatgccgg gcgctcagag ccgctggagc cagggcaagg acctgtcctg
     3061 ggaaccgctg cgcaccgagc tcgtcgcgga ggtcgcttac gatcacatgc aaagtgggcg
     3121 cttccggcat acggcgcagt ttcgtcgctt tcgctcggac aagccgccgg ccgcgtgcac
     3181 cttcgagcag ctcgaggtgg taccgccgga agagctcagt cgcatctttc aacgaccagg
     3241 ctgagcgcgc cgtcgagcgg ccacgcgtct cagggtttcg gtcgcacgcg ccgcggtctg
     3301 agctccgggt gcgcggcgac ggcttcgcgc cagacgcgcg tcggatcatc gtcggggtcc
     3361 ggcttttcct cggccggccg gagctcgagc ggaacgtggc gcagattcac gcgcacgcgc
     3421 gtccaaagag acgagcgccc gcgcatggcg tccacgagca cgtcgtcgac ggcgaggagc
     3481 gccgcggctt cggggtgacg gctcttccag cgttcgaggc cggcgagggc cgctgccttg
     3541 tcgggggaat tggcgatcgt gacgagcggc atgcgctcgc gtttcacgcc cgtccccttc
     3601 ttgcgcgagg gcgccacgcg cgcgccttcg ttcggcattt tgcgaaaatg cggcggccag
     3661 ggcgcgtcgc cgatgcccgc cgcttcgtcg gcgagcgcga gctcgagcag cttgtcgagc
     3721 gagccgacgg cgcggtcgat gcccgcgtgc gggtcgccga gggtgcgcca gcgttcg
//
LOCUS       DATIML010000490         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4428469, whole genome shotgun sequence.
ACCESSION   DATIML010000490 DATIML010000000
VERSION     DATIML010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4428469"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1474
                     /locus_tag="VLJ38_08525"
     CDS             <1..1474
                     /locus_tag="VLJ38_08525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39599.1"
                     /translation="RVSGLDGAYTNESVKLVANCEEYLFQRPDDAVQRGFDAQAEADL
                     ATAGTFISNFEPLTRDDVQKLADHVTEFDRYTAPMRDLLSNFLEGSRTEYAVSSAHMR
                     LVNGKPSKNPRYLQRRPDHVERRDAYVAEIGARLDGEVRSESPILPVVQAVLGGRRAN
                     RAQPEIGLPPLAVYGPLHYQELPELFMDHLTSLTGKSPSTTGFGSEGALTKGPFNALW
                     PVVDMNNALVSAILTGYAGFTSVAGYVGPAYKVDHDISMLVPELWCRMSVREREPAYL
                     IEHGYLEPVRDFEHEGRRVLGSRLGYRITPRFVEHFLGRMFQTPNAVFTEDMLRPERQ
                     GLEPFVAGIDALVATQTRVAQSYFEDGSVNGACPPLKALLHVMARGEYEGLSASAPNF
                     RALFTRPSLLASEWYATRLLTKQRRDVALWRRHEAALDDANALRRQKPALFRERSELV
                     EQELARVGAPEYLAELVGTLGADPFEYQDPAQKRLLSAAE"
     gene            1471..>1699
                     /locus_tag="VLJ38_08530"
     CDS             1471..>1699
                     /locus_tag="VLJ38_08530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39600.1"
                     /translation="MSGPVELTVLRDFLQQRPLLLLFAVAALGYLFGRVNWRGFSLGV
                     AAVLFAGLLAGWLLPGAALPAFVPELGLVLFV"
BASE COUNT          268 a          591 c          548 g          292 t
ORIGIN      
        1 ccgggtctcg ggcctcgacg gcgcgtacac gaacgagagc gtgaagctcg tcgccaactg
       61 cgaggagtac ctgtttcaac gaccggacga cgcggttcag cgcggcttcg acgcgcaggc
      121 cgaagccgac ttggcgacgg cgggtacgtt catctcgaac ttcgagccgc tcacgcgtga
      181 cgacgtgcaa aagctcgcgg atcacgtcac cgaattcgac cgctacaccg cgccgatgcg
      241 cgacctcttg tcgaattttc tcgagggctc gcggaccgaa tacgccgtct cctcggcgca
      301 catgcgcttg gtgaacggca aaccctcgaa gaatccgcgc tacttgcagc ggcgaccgga
      361 ccacgtcgag cgacgcgacg cgtacgtcgc cgaaatcggc gcgcggctcg acggcgaggt
      421 gcgctccgaa agccccatct tacccgtcgt gcaggccgtg ctcggcggcc gccgtgccaa
      481 cagagcccag cccgaaattg gcctgcctcc gctcgcggtg tacggcccgc tccattacca
      541 ggagctgccc gagctcttca tggatcattt gacgagcctc accggcaaat cgccgtccac
      601 tacgggcttc ggcagcgaag gggcgctcac caaaggcccg ttcaacgcgc tctggcccgt
      661 ggtggacatg aacaacgccc tcgtctcggc gatcctcacc ggttatgcgg gcttcacgag
      721 cgtggctggc tacgtcggtc ccgcttacaa ggtggaccac gacatcagca tgctcgtgcc
      781 cgagctctgg tgccgcatga gcgtgcgtga gcgcgagccc gcgtatctca tcgaacacgg
      841 ctacctcgag ccggtccgcg acttcgagca cgaaggacgg cgggtgctcg gcagtcggct
      901 gggctatcgc atcacgccgc gcttcgtgga gcacttcctc gggcgcatgt tccaaacgcc
      961 caacgccgtt ttcacggagg acatgctgcg gcccgaacgt caagggctcg agccgttcgt
     1021 cgcgggcatc gatgcactcg tcgcgacgca gacgcgcgtc gcgcagagct atttcgagga
     1081 cggcagcgtc aacggcgcgt gcccgccgct caaggccttg ctgcacgtca tggcccgcgg
     1141 cgagtacgag gggctctccg cgagcgcccc gaatttccgc gctctcttta cacgcccatc
     1201 gctgctcgcc agcgaatggt acgcgacgcg cctgctcacg aagcaacgtc gtgacgtggc
     1261 gctctggcgg cggcacgagg cggcactcga cgacgcgaac gcgctgcggc gccagaagcc
     1321 ggccctattt cgcgagcgtt ccgagctcgt cgagcaggag ctcgcgcgcg tcggggcacc
     1381 cgaatacctc gcggagctcg tgggcaccct cggcgccgat cccttcgagt accaggaccc
     1441 agcgcaaaag cgcctgctct ccgcggccga atgagcgggc cagtcgagct cacggtgctg
     1501 cgagatttcc tgcaacaacg accgctgctg ctgctcttcg cggtggcggc gctcggttac
     1561 ttgttcggcc gtgtcaattg gcgtggcttc tcgctcgggg tcgccgcggt gctgtttgcg
     1621 ggactcctcg cgggctggtt gctgccgggg gccgctctgc ccgcgttcgt gcccgagctc
     1681 gggctcgtgc tcttcgtct
//
LOCUS       DATIML010000491         4699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_964634, whole genome shotgun sequence.
ACCESSION   DATIML010000491 DATIML010000000
VERSION     DATIML010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964634"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..811)
                     /locus_tag="VLJ38_08535"
     CDS             complement(<1..811)
                     /locus_tag="VLJ38_08535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39601.1"
                     /translation="MLHRAAHGRACLLFLALVGAAPAAAAQDDAVRVACEALAPEDAA
                     QVEARIRATLLTAPAVDVSVRIDCTATTANVRVVSGERSETAALLLPDDNRRDALLAT
                     VEDLLAALERENTTPPPPQASATPPAVSVPALPTPATAPPPPVAPPQPSPSARGNAPR
                     WDIGAGALAELWEGAVGYGARLVSERRQGSWSVGADFGWLTTPEFTDVFRAHELHAFV
                     FGALEERRTTGLRGALGAGVSVLTVLPRPDIVVRTPTTLPLVFLNAELARPV"
     gene            944..1459
                     /locus_tag="VLJ38_08540"
     CDS             944..1459
                     /locus_tag="VLJ38_08540"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU39602.1"
                     /translation="MNTVSDRELFELVYRRMRNLVLADSPDFEDLVQAAAAEAWRALP
                     GFEGKSELGTWIYTICYRVLANHRRWWRRYNLRFSLGVDDVFASDRTPAPELLDERAR
                     VERLRVLLGRMSDKYRAVVMLHDLEGFTIAEIAGIVGANELTVRSRLRDGRKQLRRLL
                     ELDPTLVLEEA"
     gene            1464..2186
                     /locus_tag="VLJ38_08545"
     CDS             1464..2186
                     /locus_tag="VLJ38_08545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39603.1"
                     /translation="MSLDYEDDPPRAAAVWDLVRSDEPDARAMQAAYFRFAGRRPGHV
                     SAFILVRWLLAGFVLGWGVAFAATGDPLFGAGLRRTAQTPLPVPSALREAPRRHRASE
                     RSPAQPSAVPPLDSAAPEPSPSTAHAPSSPSAPALAETPLADPKWQRAAAALKVHDYA
                     AAETALRDVETAGTPADRDAATLALAQVLLTRGRVVEARARLERLSGHAGAPLVREKA
                     AALLSDLFAAEGRSSGTPAVPQ"
     gene            2189..>4699
                     /locus_tag="VLJ38_08550"
     CDS             2189..>4699
                     /locus_tag="VLJ38_08550"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HSU39604.1"
                     /translation="MAKATRKVGRAVASIVALVAGCAPMSINLEHQGTGGDGAGETNT
                     SGTGGSSLGTSGGAHQGSAGRGGSGGTGAPSGGTGDSASSDAGQGTGNDGNGGPSCGN
                     GVLADVQNGHDLLPGYTAPQDPRVATWLAEMTLEDQMTEMQGANDGHDKNFNDIQRSL
                     DVPLADGTVLRGYKYCGGPRGATLAQPQLDRSSDGNNFSTAFPAPSIRGASWDLDLEW
                     RVGEAIGDETTASNNDLLLGPGVDVLRHPYWGRSQDTYGEDTYHLGRMGTAFVAGVQQ
                     RIGACAQHFVQDTIESNRSNNNPMVDEQTLREIYARPFEMLVKDGGVACVMAAYGMLN
                     GVRTTANAHLLTDILKGPVEQGGFGFRGLVLTDWWAAPGGEVGRIDAQTGTANATAMA
                     NAGLDVELPWWLNYGYLPNVVPASVDPDVIAGAASRVLEQKARFQSALTSEPIGLRPS
                     SSALEGSSIATNGEHLTLAERAELESAVLLANGLDGAPVLPIAEQTRTITVIGAEVDF
                     ILQSTTNPRSCPTTKGNCTFHFATDVALGDRGSNRVNADPAVSVGPFSGIQAASTTRG
                     ITTVTEGSTAQDAAASEVVVVVVGLTPGDEGEEYALTTGGDRRTLALPASQAELVSSV
                     LDLNKPTVIVVESGSMVELPWLTHTNRNQATVCAGYGGMRGGAALGKLLFGDANFSGK
                     LPVAWAHESALPPFDDGSMGYFVGYREYDRRAAAGDQVGVVFPFGHGLSYTTFAYSDL
                     GVPCTDVSERAVLDVTANVTNTGAFDGDEVAFLFVAGPTGSDEPRSVKELKSFARVSL
                     AAGAAQTVHLPVRVQDLRHWSNAQNLWVIDPGEYRVLVG"
BASE COUNT          784 a         1578 c         1642 g          695 t
ORIGIN      
        1 gcacgggccg cgcgagctcg gcgttcagga acacgagcgg cagagtcgtc ggcgtgcgca
       61 cgacgatgtc gggcctcggc aagaccgtga gcacactcac gcctgcgccg agcgcgccac
      121 gcagcccggt cgtgcgtcgc tcctcgagcg caccgaagac gaacgcgtgc agctcatgcg
      181 cgcgaaagac gtccgtgaat tcaggtgtcg tcagccagcc gaagtccgcg ccgacggacc
      241 acgagccttg gcgccgctcg ctgacgagcc gcgctccgta gcccaccgcg ccttcccaga
      301 gttcggcgag tgcgccggct ccgatatccc agcgcggcgc gttgccgcga gcggacggtg
      361 acggctgcgg aggagcgacg ggcggcggag gagcggtggc cggcgtcggg agcgcaggca
      421 cgctgacggc gggcggagtc gccgaggctt gcgggggtgg cggggtcgtg ttttcacgct
      481 cgagggctgc gagcagatcc tcgacggtgg cgagcagcgc gtcgcgccga ttgtcgtcgg
      541 gcaaaaggag cgccgccgtc tcgctgcgct cgcccgagac gacgcgaacg ttggccgtcg
      601 tggcggtaca gtcgatgcgg acgctcacgt cgacggccgg agcggtcaac aaagtcgcgc
      661 gaatacgcgc ttcgacctgg gccgcgtcct cgggcgcgag cgcttcgcag gcaacacgaa
      721 cggcgtcgtc ctgcgccgcc gcggcgggcg ctgcccctac caacgccaaa aacagcaagc
      781 aagcgcgccc gtgggcagca cggtggagca ttccggcgcg agcgagcgta tggcattggc
      841 gttcggccgg ccaggtccga gactcgagca gctgcgctgc gtgtaaggcg cgccgcacga
      901 ccgctcaggt agcgggggtc agcacactaa tccgaggacg agcgtgaaca ccgtctccga
      961 tcgtgaactg ttcgagctcg tttaccgccg catgcgaaat ttggttctcg ccgatagccc
     1021 tgatttcgag gacctggtgc aagcggccgc agccgaggcg tggcgtgctc tgccgggctt
     1081 cgagggcaag agcgagcttg gcacctggat ttataccatc tgctatcgcg tgctcgcgaa
     1141 ccatcgacgc tggtggcgga ggtacaacct gcgcttcagc ctcggcgtgg acgacgtgtt
     1201 cgcgagcgac cggacgccgg cccccgagct cctcgacgag cgggcgcgcg tcgagcggct
     1261 gcgcgtgctg ctcgggcgca tgagcgacaa gtaccgcgcc gtcgtcatgc tgcacgatct
     1321 ggaaggcttc acgatcgccg agatcgccgg catcgtcggc gcgaacgagc tcaccgttcg
     1381 ctcgcgcctg cgcgacggca gaaagcagct gcggcggttg ctcgagctcg accccacgct
     1441 cgtgctcgag gaggcctgaa gcaatgagtc tcgactacga ggacgacccg ccgcgcgccg
     1501 cggcggtttg ggacctagtg cgaagtgacg agccggacgc gcgcgccatg caggcggctt
     1561 attttcgctt tgcaggtcgc cgtcccgggc acgtgtccgc cttcatcctc gtgcgctggc
     1621 tcctggccgg cttcgtgctc ggctggggcg ttgctttcgc ggccacgggc gatccgctgt
     1681 tcggcgccgg actgcgtcgc acggcccaaa cgccgcttcc cgtcccgagc gcgctgcggg
     1741 aggcccctcg tcggcaccgt gcgagcgagc gctcaccagc gcagccaagc gctgtgcccc
     1801 cgctcgacag cgctgcaccc gagccgagcc cctccacggc gcatgcgccg agctcgcctt
     1861 cggcgccggc gctcgcagag accccgctgg cggaccccaa gtggcagcgc gccgccgcgg
     1921 cgctcaaggt tcacgactac gcggcggcag agacggcgct gcgcgacgtc gagacggcgg
     1981 ggacgcccgc tgaccgcgat gccgcgactc tcgcgctcgc gcaggtgctg ctcacgcgtg
     2041 ggcgcgtcgt ggaagcgcgc gcgcggctcg aacgtttgag cggccacgcg ggtgcgccgc
     2101 tcgtgcgtga gaaggcggct gcgctcctca gcgatctttt tgccgccgag gggcgctcat
     2161 ccggaacgcc tgcggtgcct caatgagcat ggccaaggct actcgcaagg tggggcgcgc
     2221 agtcgcgagc atcgtcgctc tcgtcgcagg ctgcgcaccg atgtcgatca atctggagca
     2281 tcagggcacg gggggcgacg gcgcgggcga gacgaatact tcgggaacgg gtggaagctc
     2341 cctcggcacc agcggtgggg cgcaccaagg gagcgccggt cggggcggca gcggcggaac
     2401 cggcgctcct tcgggcggta cgggtgattc ggcaagtagc gacgctgggc aggggacggg
     2461 caatgacggc aacggcggtc cgtcctgcgg caacggcgtg ctcgccgacg tgcagaacgg
     2521 tcacgatctc ttacccggct acacggcgcc gcaagacccg cgagttgcga cgtggctcgc
     2581 cgagatgacg ctcgaagacc agatgacgga aatgcagggg gccaacgacg gccacgacaa
     2641 gaacttcaat gacattcagc ggagcctcga cgtgccgctc gccgacggca cagtcctgcg
     2701 tggctataaa tactgcggcg gcccgcgcgg cgcgaccctc gcgcagccgc agctcgatcg
     2761 tagcagcgac ggcaacaact tctcgacggc attccccgcg ccgtcgatcc gaggagcgtc
     2821 gtgggacctc gacctcgaat ggcgcgtcgg tgaagccatc ggcgacgaga ccacggcgtc
     2881 caacaacgat ttgttgctcg gacccggcgt tgacgtcttg cgccatccgt attgggggcg
     2941 ctcgcaagac acctacggtg aggacacgta tcacctcggc cgcatgggca ctgcgttcgt
     3001 tgcaggcgtg cagcagcgca tcggagcgtg cgcgcagcac ttcgtgcagg acacgattga
     3061 aagtaaccgt tcgaacaaca atccgatggt tgacgagcaa acgctgcgag aaatctacgc
     3121 gcggccgttc gagatgctcg tgaaggacgg cggcgtcgcc tgcgtcatgg ccgcctacgg
     3181 catgctcaac ggcgtccgca cgaccgcaaa cgcgcacctc ttgacggaca ttctcaaagg
     3241 tccagtcgag caaggcggct tcggtttccg gggcttggtg ctcacggatt ggtgggcagc
     3301 tccgggtgga gaggtgggga gaatcgatgc gcagacgggg acggccaatg ccaccgccat
     3361 ggcgaacgct ggtctcgacg tcgaactgcc atggtggctc aattacggtt acctcccgaa
     3421 cgtcgtgccg gcgtccgtcg atcccgacgt catcgcagga gcggcgtcgc gcgtcctcga
     3481 acagaaggct cgcttccagt cggcgctcac gagcgagccg atcggcctgc gtccgtcgag
     3541 ctccgctcta gagggcagtt cgatcgcgac gaacggcgag cacctcaccc ttgccgaacg
     3601 agccgagctc gagtccgccg tgctgctcgc caacggcctc gacggcgcac ccgtgctgcc
     3661 catcgccgag cagacgagga cgatcacggt catcggcgcc gaggtggact ttatactgca
     3721 aagcaccacg aaccccagaa gctgcccgac gacgaagggc aattgtacct ttcatttcgc
     3781 cacggacgtc gcgctcggcg atcgcgggag caatcgggtc aacgcggacc cggccgtgtc
     3841 cgtcggccca ttctccggca tccaagcggc aagcaccacg cgcggcatca cgacggtcac
     3901 ggagggaagc acggctcaag acgccgccgc ttcggaggtg gtcgtcgtcg tggtcggact
     3961 cacgcccgga gacgagggag aggagtacgc gctcaccacg ggcggcgacc gcaggaccct
     4021 cgccttgccg gcctcgcaag ccgagctcgt cagcagcgtg ctcgatctga ataagccgac
     4081 ggtcatcgtc gtcgaatcgg gctcgatggt cgaactcccg tggctcacgc acacgaaccg
     4141 aaaccaagcc acggtgtgtg caggctacgg cggcatgcgc ggaggcgcgg cgctcggcaa
     4201 gctcctcttc ggcgacgcga acttcagcgg caagctgccg gtcgcctggg cgcatgaaag
     4261 cgcgctgccg cccttcgacg acggaagcat gggctacttc gtcggctatc gcgagtacga
     4321 ccggcgcgcc gccgcgggag accaggtagg cgtcgtgttc ccgttcgggc acggcttgag
     4381 ctacaccacg ttcgcgtatt cggacctggg ggtgccgtgc accgacgtga gcgagcgtgc
     4441 cgtgctcgac gtgacggcga acgtcacgaa cacgggcgcg ttcgacggcg acgaggtcgc
     4501 gttcctcttc gtcgcgggcc ccaccggcag cgacgagccg cggtcggtca aagagctcaa
     4561 gagttttgcg cgcgtgtcac tcgccgcagg cgccgcacaa accgtgcacc tgcccgtgcg
     4621 cgtccaagac ctccggcact ggagtaacgc gcagaacctc tgggtcatcg accccggcga
     4681 ataccgggtg ctcgtcggc
//
LOCUS       DATIML010000492         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5585615, whole genome shotgun sequence.
ACCESSION   DATIML010000492 DATIML010000000
VERSION     DATIML010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5585615"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..967
                     /locus_tag="VLJ38_08555"
     CDS             <1..967
                     /locus_tag="VLJ38_08555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39605.1"
                     /translation="TCVPARPGEYDGVPSELDRDGDGIVDADDRCPSVFDPPRPLDAG
                     AQADADADGRGDACDPCPLDPDDACAHDRGGDRDGDAVPDGRDRCPDVSDPEQADDDG
                     DGRGNACDFCATANPGAEPCALPIAALRDHAAPEHPPRHALVELASAVVTAVRPNSGS
                     SRGFYVEDDTAPYSGLFVYTGSDAPGVAVGDHVGVRGRYDIYYDLDELVGATLLARET
                     LGEPPAPLVVRAEDVGDGGALAAAYDSMLVSVTDAVVVETNPDAPADYDESQLSGALR
                     LDDLLDPELDNVFAPNTGFSALTGILGYSFGHRKLMPRSAADRAP"
     gene            complement(972..1514)
                     /locus_tag="VLJ38_08560"
     CDS             complement(972..1514)
                     /locus_tag="VLJ38_08560"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSU39606.1"
                     /translation="MPAPKPPETPWFTAGLVLFAAGLFGWLVLPRLAADPFVGKSAPD
                     FVLPRLDPAGALANDKVRLSDLQGKAVILDFWASWCMPCRAEMPIVDRVAKKQGPRGV
                     VALGVLSGDAPEDAGTFLAQHPVSYPSVVDEQSLAGTAFAVRGLPTLIVLDRKGAVVA
                     VRLGHVSENELTALVDTALH"
     gene            complement(1520..>2345)
                     /locus_tag="VLJ38_08565"
     CDS             complement(1520..>2345)
                     /locus_tag="VLJ38_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39607.1"
                     /translation="DLSVRVPEARDDELGTLAREFNRMLTEVETSRARIEYLQRISAW
                     QEMARRLAHEIKNPLTPIQLAVQDIHRRYEGKNPEFQKLLDTTLEVVEDEVGTLRRLV
                     GEFSDFARLPQAELEPADVSEFLSELAERPLFGEEERRSDSDAPGLAPRIEFDVPKEQ
                     ALAKIDRQMLRRVVINLVQNAVQALAQTKRPGHVVVRLGRQGGSLVLDVDDDGPGIPP
                     ELRAAVFDPYVTTKTDGTGLGLAIVKKIVVEHHGTISAEQSPEGGARLRVRLPALS"
BASE COUNT          353 a          822 c          788 g          382 t
ORIGIN      
        1 gacctgcgtg cccgcgcgtc cgggggagta cgacggcgtt ccgagcgagc tcgatcgcga
       61 cggcgacggt atcgtggacg ccgacgatcg ctgcccgagc gtcttcgatc caccgcgtcc
      121 cctcgacgcc ggagctcagg ccgacgccga cgccgacggg cgtggcgacg cttgcgaccc
      181 ctgcccgctc gatccggacg acgcctgtgc gcacgaccgc ggcggggatc gcgacggcga
      241 cgccgtgccc gacggccgcg atcgctgtcc cgacgtgagc gaccccgagc aagccgacga
      301 cgacggcgat ggccgcggca atgcctgcga tttctgcgcg actgccaatc cgggtgccga
      361 gccgtgtgct ctgccgatcg ccgcgcttcg tgaccacgcc gcgcctgagc acccgccgcg
      421 tcacgcgctc gtcgagctcg cgtccgccgt cgtcacggcc gtacgcccta acagcgggag
      481 ctcgcgcggg ttctacgtcg aggacgacac ggcgccgtac tcgggactct tcgtttacac
      541 gggctcggac gcgccgggcg tcgccgtcgg cgatcacgtc ggcgtgcgcg gacgctatga
      601 catttattac gatttggacg agctcgtggg cgcgacgttg ctcgcacggg aaacgctcgg
      661 cgagccacct gcgccgctcg tcgtccgcgc cgaagatgtc ggcgacggcg gtgcgctcgc
      721 ggccgcctac gactccatgc tcgtcagcgt cacggacgcg gtcgtcgtcg aaacgaaccc
      781 cgacgccccg gccgactacg acgaatccca gctctccggc gcgctccggc tcgacgatct
      841 actcgacccc gagctcgaca acgtcttcgc gccgaacacc ggtttttcag ccctgaccgg
      901 catcctcggc tattcgttcg gccaccggaa gctcatgccg cggagcgcgg cggatcgcgc
      961 cccgtgaagc ttcagtgcag cgcggtgtcg acgagcgccg tgagctcgtt ttccgagacg
     1021 tgcccgagac gcacggcgac gacggcgccc ttgcgatcga gcacgatgag cgtcggtaac
     1081 cccctcacgg caaatgccgt ccccgcgagc gactgttcgt cgaccacgct cggatagctc
     1141 accgggtgct gggccaagaa cgtccccgcg tcctcgggcg cgtcaccgga gagcacgccg
     1201 agcgcgacga ccccgcgcgg tccttgcttt ttcgcgaccc ggtcgacgat gggcatttcg
     1261 gctcggcacg gcatgcacca gctcgcccaa aaatccaaaa tcacggcctt gccctgcaga
     1321 tccgagagcc gcaccttgtc gttcgcgagc gcgcccgccg ggtcgaggcg gggcaacacg
     1381 aaatccggcg cgctcttgcc gacgaacgga tcggccgcga gccgcggcaa cacgagccag
     1441 ccgaagagac ccgcggcgaa cagcacgagc ccggcagtaa accagggcgt ttcggggggc
     1501 ttcggcgcgg gcatcagact cagcttagcg ccggaaggcg aacgcgcagt cgggcgccgc
     1561 cttcggggct ctgttcggcg gagatcgtgc cgtggtgctc gacgacgatt tttttgacga
     1621 tggcgaggcc gagacccgtc ccgtccgtct tcgtcgtcac gtacggatcg aagacggcgg
     1681 cccggagctc gggcgggatg ccgggaccgt catcgtcgac gtcgagcacg aggctaccgc
     1741 cttgccggcc gagacgcacg accacgtgac cgggccgttt cgtctgggcg agcgcctgca
     1801 cggcgttctg cacgaggttg atcacgaccc ggcgcagcat ctgccggtcg atcttggcca
     1861 aagcttgctc cttgggcacg tcgaactcga tgcgcggcgc gaggcccggc gcgtcgctgt
     1921 cgctccggcg ctcttcctcg ccgaagagcg ggcgctcggc gagctcgctc agaaattcgc
     1981 tgacgtcggc tggctcgagc tctgcttgcg gcaagcgcgc gaagtcggaa aattctccga
     2041 cgaggcgccg gagcgtcccg acctcgtcct cgaccacctc gagcgtggtg tcgagcagct
     2101 tttggaattc tgggtttttg ccttcgtagc ggcgatggat gtcctgaacc gccagctgaa
     2161 tcggcgtgag cgggtttttg atttcatgcg cgagccggcg cgccatttct tgccacgcgc
     2221 tgatgcgctg gaggtattcg atgcgagcgc ggctcgtttc gacttcggtc agcatgcgat
     2281 tgaactcgcg ggcgagcgtg ccaagctcgt cgtcgcgcgc ttctggcacg cgcacgctga
     2341 gatcg
//
LOCUS       DATIML010000493         6852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2118062, whole genome shotgun sequence.
ACCESSION   DATIML010000493 DATIML010000000
VERSION     DATIML010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6852
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2118062"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..960
                     /locus_tag="VLJ38_08570"
     CDS             <1..960
                     /locus_tag="VLJ38_08570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39608.1"
                     /translation="ASGCDQANELFMRSSPVVKQAVEALDGGDAGAAVSLLEEYLSTG
                     KCENGNIGAPSSVSSRPNAAFDLGLGLFTIAEKFGKRFGEDPPPPDGGRAPEEEAELA
                     KRSAEVDCALRIVRLAATDQSVPLDLRARAFYLAGNLEFLRRDYRSAVASYDAALKLI
                     PGLPGDAGDATGRDAAYNRAIALRRIEDEQKDAGPPDGGDGGDGGEQPDAGNDGGKQD
                     QPDAGKQDQPDAGKPDQPDAGNGEPDAGKDGGSPNQPDAGKQGEDGGAPPPEQKQPQS
                     QPQQQQNPDDRLLDEFEQAPTLQQHDAKERAAHARGRPGMEDK"
     gene            957..2864
                     /locus_tag="VLJ38_08575"
     CDS             957..2864
                     /locus_tag="VLJ38_08575"
                     /inference="COORDINATES: protein motif:HMM:NF024973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HSU39609.1"
                     /translation="MSLRLLAAVALAFVVLVCTGSARAQVRVQTEIAAHKIELGNAVQ
                     FQITAMSSTGDVPQNPHLGPVAGLSIMGPSTGTRSQVSINNGRMQQESGISATWNIQG
                     VKVGTYRIGPATVDLGGQRFQSQVETLEVVPPGTLPRGGQRGGGPQPFDPFRFFDPFG
                     GGSPFPPGLFPPNDLDQQQELPPVPDELKVERAPDPIAFMRAVVTPKHPVVGEQVTVR
                     FYAYGGRGMYRAVNAVDPTYPDFLDYTGQDDSFTENPVQVPIGEQVFVAQKLRELCLF
                     PLHAGKLTIGSMTLTFTGGRYVANPPITRSSPPITLDVVEPPLDNRPPGYRVGDVGTL
                     ELSVAVDPRRVTAGDTVGVVAKLEGTGSIPTTLRVPEQRGVEWLDPTHVDEVHEQHGV
                     VRGFRAFTYLVKMNEPGRVELGELTLPYWDPRKRAYVTARASLGKVDVAPSPKKAAPV
                     ASASAGATKTDEPDALALKPRRTLAPYGAAAAPFTDALRFWYLLLGAPIAVGLAGVGV
                     DIGGRLRRRFSSARTSPQRLAQDSLRVAELAAKGSEIAKTAAAVERALFLAIEAGTGI
                     RARALLKDDLKAALAAAGIDSGTIERTLALLDACEAARFTGKSPDLPPKELCARAHGL
                     VGELSRKRRSS"
     gene            2861..3724
                     /locus_tag="VLJ38_08580"
     CDS             2861..3724
                     /locus_tag="VLJ38_08580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39610.1"
                     /translation="MSGEQLRRLCVTLGALLAPLALFLVWERTAAAAEPRQGFEEAVT
                     AIERGAYGDAIDRLELLADQGFVHPDASFDRAVAYIGRARSPQRQPGDLGRAAAALAE
                     TLALRPDDHAAESALDAVRAEIGRRRAHQGGAPLIVKQRLVRALVGLLPETAWGVIGA
                     LGSASLAWGLALRLFVRRTSTEVPGALAIGIGALLLCVGGGLALGARHFRRTSTLAVV
                     VVPEARLLDEAGRPLPVSANTETNVVPEGAEVYVLDRRGALDRVEWGTTDGFVIAGQV
                     REVEPHAGTAP"
     gene            complement(3726..4625)
                     /locus_tag="VLJ38_08585"
     CDS             complement(3726..4625)
                     /locus_tag="VLJ38_08585"
                     /inference="COORDINATES: protein motif:HMM:NF024922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HSU39611.1"
                     /translation="MVLTRPMKPRSLSAPRRPWRGPAPARAGTDARGHLIVPGYVRER
                     ARGQILAYLARLHPIWEFRFPVDRPPPRGETQRRLLRPVYWLGNWQFACLDYYRPPNG
                     IFERSVGAEPFPPVLAELVRDIEARARRVFPREYVPEGWHLNTCLVNFYGDRLEGGRW
                     VDSARVGEHRDFEPGPVASLSLGERALFQFVPRRKAGERAEPALTQWLDDGSLQLFAG
                     PLYKERLLHRIQRVDDRLGVTLPPEIEGFRTRRVNFTFRYVPDEHVIPFARLSERARG
                     DVRPYVAELAQHSPFFARALAER"
     gene            4722..5627
                     /locus_tag="VLJ38_08590"
     CDS             4722..5627
                     /locus_tag="VLJ38_08590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39612.1"
                     /translation="MANHPAAGTTAVPVPASASPSSTPNAGPAPATAPSPSAAGSACG
                     ELDCRAFDTPRQAFEQALTSAPRVIAIGEAHAQKAAPGVESATSRFARELLPALAPRT
                     KGIVIELLAPDRRCEQHEEQAVAERTKPVTEPQRETNQSEFVALGFAAKKLGIRAEPL
                     VPTCDELKTVLHADNDVGALLELIANITVRETFEFLDHQKPEAAIAIYGGLLHNDVTP
                     KPGQEAWSFGPRIRDHARGSYVEVDLIVPELIRSEPPWTELPWFSHYDPTSASNQTLL
                     YRTGPASFVLIFPRSDATANPKATP"
     gene            5624..6820
                     /gene="manA"
                     /locus_tag="VLJ38_08595"
     CDS             5624..6820
                     /gene="manA"
                     /locus_tag="VLJ38_08595"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HSU39613.1"
                     /translation="MSLLYRLENTVQNYAWGSYEALAELRGIATPTPLPEAEIWMGAH
                     PLAPSRIVGGTGSLVDLIASDPQAMLGARTATEFGRLPFLLKLLAAREPLSLQAHPSA
                     DQARAGYAREQAAGTPLSAATRSYKDPHHKPELIAALTPFTALVGFRAPHVTARLFAA
                     LRVPVLAPTVTTLERAAPEIALRQVFELVTSSPLDLRQELARATLAACENPPTDASDF
                     TRELAWGARIGALYPGDAGIVLALALNLVVLEPGQALYLPAGNLHAYLEGTGVEIMAS
                     SDNVLRGGLTPKHVDATELLSVLDFEAEPVTLVPTEQRGGVTRYVTPAREFELSRVEL
                     AGTTWHASVSEPEIVLATRGPVVVQRGPDAVTLSSGASAFIPAKGGDYDVRGTGTVFR
                     ARVNSA"
BASE COUNT         1151 a         2535 c         2199 g          967 t
ORIGIN      
        1 gcgagcgggt gcgatcaggc caacgagctc ttcatgcgta gctctcccgt cgtgaagcag
       61 gcggtcgagg cgctcgatgg cggcgacgcg ggcgcggccg tttcactgct cgaagagtac
      121 ctttcgaccg gcaagtgcga gaacggcaac atcggcgcgc cgagctcggt gagctcgcgg
      181 ccgaacgcgg ccttcgatct gggtctcggc ctcttcacca tcgcggagaa attcggtaag
      241 cgcttcgggg aagatccacc gccgcctgac gggggacgtg cgccagaaga agaggccgag
      301 ctcgccaagc gcagcgccga ggtcgactgc gcgcttcgca tcgtgcgcct cgcggcgacc
      361 gaccagagtg ttccgctcga cctccgcgcg cgggcctttt acctcgccgg caatctcgag
      421 ttcctgcggc gcgactaccg ctcggccgtg gcaagttacg acgccgcgct gaagctcatc
      481 cccggcctgc cgggcgacgc gggcgacgcc acgggccgcg acgcagcgta caatcgcgcc
      541 atcgccttgc gccggatcga ggacgagcag aaggacgcgg gcccgccgga cggcggcgac
      601 ggcggcgacg gcggcgagca gccggacgcc ggcaacgacg ggggcaagca ggatcagccc
      661 gacgccggca aacaggatca accggacgcc ggcaagccgg atcagccgga tgccggcaac
      721 ggtgagccgg acgcgggcaa agacggaggc agcccgaacc aacccgacgc cggcaaacag
      781 ggcgaagacg gcggcgcgcc tccacccgag cagaagcagc cgcaatctca gccccagcaa
      841 cagcaaaatc ccgacgatcg gctgctcgac gagttcgagc aggcgccgac gctccagcaa
      901 cacgacgcca aggagcgtgc ggcccacgcc cgcgggcgcc cgggtatgga ggacaagtga
      961 gtttacgtct gctcgccgcg gtcgcgctcg cgttcgtcgt gctcgtgtgc acgggcagcg
     1021 cgcgagctca ggtgcgcgtg cagacggaaa tcgcggcgca taagatcgag ctcgggaacg
     1081 cggtgcagtt tcagatcacc gccatgagct cgacgggcga cgtcccgcaa aacccgcact
     1141 tgggtcccgt cgcgggcctg agcatcatgg gtcccagcac cggcacgcgc agccaggtga
     1201 gcatcaacaa cggccgtatg cagcaggaga gcgggatttc cgcgacctgg aacatccaag
     1261 gcgtcaaggt cggcacctac cgcattggac ctgccacggt cgacctcggc ggccagcgtt
     1321 ttcagagcca ggtggagacg ctcgaggtcg tgccgccagg cacgttgccg cgcggcggac
     1381 agcgcggcgg tggaccgcag ccgttcgatc ccttccgctt tttcgatccc ttcgggggcg
     1441 gttctccgtt tccaccgggg cttttcccgc ccaatgacct cgaccagcag caagagctcc
     1501 cgcccgtgcc cgacgagctc aaggtcgagc gcgcacccga tccgatcgcg ttcatgcgcg
     1561 ccgtcgtgac gccgaagcac cccgtagtcg gcgaacaagt cacggtgcgc ttctacgcgt
     1621 acggcggtcg cggcatgtac cgcgcagtca acgccgtgga tccgacgtac ccagatttcc
     1681 tcgactacac cgggcaagac gactcgttca ccgaaaaccc cgtgcaggtt ccgatcggcg
     1741 agcaggtgtt cgtcgcgcaa aagctccgcg agctctgtct gtttccgctt cacgccggca
     1801 agctaacgat cggctcgatg acgctcacgt tcaccggcgg ccggtacgtc gcgaacccgc
     1861 ccatcacgcg ctcgagcccg ccgatcacgc tcgacgtggt cgaaccgccg ctcgacaatc
     1921 gcccgcccgg gtatcgcgtc ggtgacgtgg gcacactcga gctcagcgtc gcggtcgatc
     1981 cgcgccgtgt gaccgccggc gatacggtcg gcgtcgtcgc caagctcgaa ggcaccggca
     2041 gcatccccac gaccttacgc gtgcccgagc agcgcggcgt cgaatggctc gatccgaccc
     2101 acgtggacga ggtgcatgag cagcacggcg tcgtccgcgg ctttcgcgcg ttcacctacc
     2161 tcgtcaaaat gaacgagccc ggccgcgtcg agctcggcga gctcacattg ccctactggg
     2221 acccgcgcaa acgcgcctac gtcacggcgc gcgcgagcct cggcaaagtc gacgtggcgc
     2281 cgagcccgaa aaaggccgcc cccgtcgcga gcgccagcgc tggcgcaacc aagaccgacg
     2341 aacccgacgc cctcgcgctc aagcctcgcc gcacgctcgc gccgtacggc gccgcggcgg
     2401 cgccgttcac cgacgccctg cgtttctggt acctcctgct cggcgcaccg atcgccgtcg
     2461 gcctcgccgg cgtcggcgtg gatatcggcg gccgcttgcg gcgtcgcttc tcctccgccc
     2521 ggacgagccc gcaacgactc gcgcaagact cgctgcgcgt cgccgaactc gccgcgaaag
     2581 gctcggagat cgccaagacg gcagcagccg tggaacgcgc gctcttcctg gcgatcgaag
     2641 cgggcaccgg catccgtgcg cgtgcgttgc tcaaagacga tctgaaggcg gcgctcgccg
     2701 ctgccggcat cgactcgggc acgattgagc gcacgctcgc cttgctcgac gcgtgtgaag
     2761 cggcgcgctt cacgggtaaa tcgcccgatt tgccgccgaa ggagctttgc gcgcgggcgc
     2821 acgggctcgt cggtgaactg tcgcgaaagc gccggagctc gtgagcgggg agcagcttcg
     2881 ccggctgtgc gtgacactcg gcgcgctgct cgcgccgttg gcgctgttct tggtgtggga
     2941 acgcaccgcg gcggccgcgg agccgcgcca agggttcgag gaagccgtga ccgcgatcga
     3001 gcgcggcgct tacggcgacg ccatcgatcg actggagctc ctcgccgacc agggtttcgt
     3061 gcaccccgac gcgagcttcg atcgcgccgt cgcctacatc ggacgcgcgc gctcaccgca
     3121 gcgccagccg ggcgatctcg gccgcgccgc cgccgctctc gccgagaccc tcgcgctccg
     3181 tcccgacgat cacgccgccg agagcgcgct cgacgccgta cgagccgaaa tcggccgcag
     3241 gcgcgcccac cagggcggcg cgccgctgat cgtgaaacag cgcttggtgc gggcgctcgt
     3301 cggcctgctg ccggaaacgg cgtggggcgt catcggggcg ctcggctccg cgagcctcgc
     3361 ttggggtctc gcgttgcggc tgttcgtgcg ccgcacgtcg acggaagtgc cgggcgcgct
     3421 cgcgatcggc atcggcgcgc tcttgctttg cgtcggtggc ggcctcgcgc tcggagcgcg
     3481 ccacttccgc cggacctcga cgctcgccgt cgtggtggtg cccgaagcgc ggctgctcga
     3541 cgaggcgggg cggccgctgc cggtgtcggc gaacacggag acgaacgtcg tgccggaggg
     3601 cgccgaagtg tacgtgctcg accggcgcgg cgcgctcgat cgcgtcgagt ggggcacgac
     3661 ggacggcttc gtcatcgccg ggcaggtgcg tgaagtcgag ccgcacgccg ggacggcgcc
     3721 gtagctcaac gttcggcgag cgcccgcgca aaaaacggcg aatgctgcgc gagctccgcg
     3781 acgtacggac gcacgtcgcc gcgcgcccgt tcggagagtc gcgcgaacgg aatcacgtgc
     3841 tcgtcgggca cgtaacgaaa cgtaaaattc acgcgccgcg tgcgaaatcc ctcgatttcc
     3901 ggcggcaacg tgacgcccaa gcgatcatcc acgcgctgaa tgcgatgcag caggcgctcc
     3961 ttgtagagcg gccccgcgaa gagctggagc gagccgtcgt cgagccactg cgtgagcgcc
     4021 ggttcggcgc gctcaccggc tttgcggcgc ggcacgaact gaaacagcgc ccgctcgccg
     4081 agtgagagcg acgccacggg ccccggctcg aaatcgcggt gctcccccac ccgcgccgaa
     4141 tcgacccagc gcccgccctc gagcctatcg ccgtagaagt tcacgagaca cgtgttcaag
     4201 tgccatccct ctggcacgta ctcgcgcgga aacacccggc gcgcccgcgc ttcgatgtcg
     4261 cgcacgagct cggcgagcac gggtggaaac ggctccgcgc ccaccgagcg ctcgaaaatt
     4321 ccgttcggcg gtcggtagta atcgaggcac gcaaactgcc agttgccgag ccagtacacg
     4381 ggccgcagca aacggcgttg cgtctcgcca cgcggcggcg gccgatcgac gggaaagcga
     4441 aactcccaaa tcggatgcag ccgcgcaaga taggcgagga tctgcccgcg agcccgctcc
     4501 cgcacataac ccggaacgat gaggtgcccg cgtgcatcgg tccccgcccg cgcaggagca
     4561 ggtccgcgcc acggccgccg gggcgcggac agggacctcg gtttcatcgg gcgcgtcaaa
     4621 accatagtat tctagccgcg gcaatgttgc gcgtggctcg cccttcggtc gccctcgtcg
     4681 ccagcctact cacggcaatc aacgcctgcg ggagccctcc cgtggccaac catcccgcag
     4741 cgggaacgac ggcggtaccc gtccctgcga gcgcgagccc ttcgagcaca cccaacgcgg
     4801 gccccgcacc agcgactgcg ccctcgcctt ccgccgccgg cagcgcctgc ggtgagctcg
     4861 actgccgtgc cttcgatacg ccacgccagg cgttcgagca ggcgctcacg agcgcgccgc
     4921 gcgtcatcgc catcggcgaa gcgcacgcgc agaaagccgc accgggcgtc gaatccgcca
     4981 cctcgcgttt cgcgcgtgag ctcttgcccg ccctcgcgcc acgcaccaag ggcatcgtca
     5041 tcgagctctt ggcgcccgac cgccgctgcg aacagcacga agaacaggcc gtcgccgaac
     5101 gcacgaagcc ggtcaccgag ccccagcgcg agaccaacca aagcgaattc gtcgcgctcg
     5161 gcttcgccgc caaaaagctc ggcatccgcg ccgagcccct cgtccccacc tgcgacgagc
     5221 ttaaaaccgt tctccacgcc gacaacgacg taggcgccct actcgagctc atcgccaaca
     5281 tcaccgtgcg tgagacgttc gagttcctcg atcaccaaaa acccgaagcc gccattgcca
     5341 tctatggcgg cctgctccac aacgacgtca cgccgaaacc aggccaggaa gcgtggagtt
     5401 tcggcccgcg catccgcgac cacgctcgcg gcagctacgt cgaggtcgac ctcatcgtcc
     5461 ccgagctcat tcgcagcgag ccgccctgga ccgagctccc ctggttctcg cactacgacc
     5521 cgacgagcgc gtcgaaccaa accctgctct accgcacggg tcccgcatct ttcgtgctga
     5581 tttttccgcg cagcgacgct acggcaaacc cgaaggccac gccgtgagct tgctttaccg
     5641 gctagaaaac acggtccaga actacgcctg gggctcctac gaagcgctcg ccgaacttcg
     5701 cggcatcgcc acaccgacgc cgctccccga agcagagatt tggatggggg cacacccact
     5761 cgcgccgtcg cgcatcgttg gcggcacagg ctcgctcgtc gacctcatcg ccagtgatcc
     5821 gcaagcgatg ctcggcgcgc gcactgctac cgaattcggc cgcctaccct tcttgctgaa
     5881 actgctcgcc gcacgcgagc ctctctcgct ccaagcgcac ccaagcgccg accaagcgcg
     5941 cgccggctac gcccgcgaac aggccgccgg cacgcccctg agcgctgcca cgcgcagcta
     6001 caaagatccc caccacaagc ccgagctcat cgccgcgctc accccgttca cggccctcgt
     6061 cggctttcgc gctccgcacg tcaccgctcg gctcttcgcc gcactgcgcg tccccgtgct
     6121 cgcgccgacg gtcactactc tcgaacgcgc cgcgcccgaa atcgcgctac ggcaagtatt
     6181 cgagctcgtc acgagctcac cgctcgacct ccgtcaagaa ctcgctcgcg cgacgctggc
     6241 cgcgtgcgag aacccgccga ccgacgccag cgatttcacg cgcgaactcg cctggggcgc
     6301 gcgcattggt gcgctctacc caggtgacgc cggcatcgtc ctcgccctcg cgctgaacct
     6361 cgtcgtgctc gagcccggcc aagcgctcta cctcccagcc ggcaacctcc acgcttacct
     6421 cgaaggcacg ggcgtcgaaa tcatggcgag ctccgacaac gtgctccgcg gcggcctcac
     6481 gccgaagcac gtcgatgcaa ccgagctact cagcgtgctc gactttgagg cagaacccgt
     6541 gacactcgtc cccaccgagc agcgcggtgg cgtcactcgc tatgtgacac ccgcgcgcga
     6601 attcgagctc tcgcgcgtcg agctcgcggg gaccacgtgg catgcatccg tgagcgaacc
     6661 agaaatcgtg ctcgctacgc ggggccccgt ggtggtccag cgcggacctg acgccgtgac
     6721 gctgtcttcc ggtgcatccg ccttcatccc ggccaagggc ggcgactacg acgtgcgcgg
     6781 caccggcacg gtatttcgtg cacgcgtgaa cagcgcgtga tttcgtcacc tctgccctcg
     6841 cggcctctgg cg
//
LOCUS       DATIML010000494         7557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3563561, whole genome shotgun sequence.
ACCESSION   DATIML010000494 DATIML010000000
VERSION     DATIML010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7557
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3563561"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1224)
                     /locus_tag="VLJ38_08600"
     CDS             complement(<1..1224)
                     /locus_tag="VLJ38_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39614.1"
                     /translation="MEVRHVTIGAPVSTGCLSSVVATTAGVRYAGKSNPTAFTGIADV
                     DSEGRWIFTQDMPPRELSGSALVFGDATAQIVAWPSTAASGITFDFYDAEGKLFATSQ
                     MDAQGEPLAAVGTLNSFWLAFSSANTLSVMNPANAIVTSVETDGCVEPSSVAIGSVGD
                     DAVLGYFCNGSSRSTAAQHLVVARVNGVTGEMQRKVLDVAIGAPTINGGPATGVPAAF
                     FHDGELLFAHPTTDGALALTRVSTADFAVSTGVVTGMPVTELNANEKNPVFSVVQVGG
                     EIGLTRAACNGHEDARSTGAFDVCHISAATFEAVCSEVDAPCQKGKLVAHGYDVTLLG
                     CGWESPTLIPIDLPSIPVNQPGYFPTGYSVFEPLSLTCDGDACSALLELNSSQLITGH
                     DHRLAFADLELAPGCT"
     gene            1576..1809
                     /locus_tag="VLJ38_08605"
     CDS             1576..1809
                     /locus_tag="VLJ38_08605"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HSU39615.1"
                     /translation="MALLLFLLDLYSFVLFVSVALSWLRLSPDNPVVRVTSALTEPLL
                     APLRRVIPPVGGFDLTPMALLLLIQLVKRLLTG"
     gene            1870..2802
                     /locus_tag="VLJ38_08610"
     CDS             1870..2802
                     /locus_tag="VLJ38_08610"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HSU39616.1"
                     /translation="MAATSFEWSEAPEPHAERRRAMLAKYPEIKRLYGPCARTKYVCT
                     ALVLVQVLAAYCLRDAPWWCVLVVAYSFGGVVNQTLLLAIHELSHNLAFERPWQNRVF
                     AVFVNLPVGVPVAETFRYYHLLHHVHQGDPRFDTDLPTELEARLLRGRFVKTLWLAFQ
                     GFAYALRPLVVHPKKPSATELANLLVQVVFDLAVLHFWGVKALAYLPIGSLLVMGLHP
                     VAGHYISEHYVFRPGQETYSYYGPLNLLAFNVGYHNEHHDFPYVAGSRLPALRRTAPE
                     FYDSLHQHASWTATLWHYVTRSDLGGFSRIKRAR"
     gene            2999..3715
                     /locus_tag="VLJ38_08615"
     CDS             2999..3715
                     /locus_tag="VLJ38_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39617.1"
                     /translation="MATKQRATRYDIGAGSATLPDIVSATGDWDDDFRPSTLTDESAH
                     FNEQTVPDLPLRISMSTPPQPRAATTTAIPRSGTRHRAVSAPPPAPSLAALPVSGASE
                     AVTPDVPEGARPSFVPHAKARPSTWAPFAVAVTGIAAAVGVALGNASLTWHFGASESV
                     APFGSAAPRAVAPALPVVLARSAEPHATASAKLEARSPPLTVPEVRYEDLPIADKDAQ
                     SRSDTRNAATRRQRLKARAR"
     gene            complement(3696..4295)
                     /locus_tag="VLJ38_08620"
     CDS             complement(3696..4295)
                     /locus_tag="VLJ38_08620"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU39618.1"
                     /translation="MSREDTTNTLLRHWRSGDRKAGDQLLHRYVPELTVFFGRRAAQN
                     AEELVQRTLLACTQGLGRFEGRSTFRTYLFGIARNQYLSFRRAEAFAAHEPITLNTSP
                     EDGPSQLAAVRQEQVILVSALGRVEPALSVVLRKFYWEELSVDEIGRELGIPVGTVKS
                     RLSRGRAALKHELAGARLREDVRGAALSELVGWFTAREP"
     gene            complement(4452..4631)
                     /locus_tag="VLJ38_08625"
     CDS             complement(4452..4631)
                     /locus_tag="VLJ38_08625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39619.1"
                     /translation="MRRATTGALASGEDNPIIPVDLPLDESGGDVLLEIQTELQRAFS
                     PPLELGAVVDRLRFE"
     gene            4852..6126
                     /locus_tag="VLJ38_08630"
     CDS             4852..6126
                     /locus_tag="VLJ38_08630"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSU39620.1"
                     /translation="MPSSTGSSTGASAALSGLEGQLQALEALYQDLHSHPELSMRESR
                     TAGIAADRLRAAGFQVTAGVGGTGVVGLLENGAGPAVMLRADMDALPIAEATGLPYAS
                     NVTVTDETGTSVPVSHMCGHDMHVTWLAGAATLLAAARDAWHGTLLVVFQPGEETAQG
                     ARAMIDDGLLKRFPKPDIVLGQHVMLGRAGDVAGSSGPITSAADSLQIRLFGRGAHGS
                     MPQASIDPVVMAAATVLRLQTIVSREVAAAEAAVITVGVLQAGTKENVIPDEAIIKLN
                     VRTFDAGVRERVLAAIERIANAEAAASGAPRKPEITTLDRYPLNVNDAAASARVAAAF
                     RAHFSESRVHHTGPAPASEDFGCFGTEWHAPSVFWFVGGTEPAAYEQAKQAGRLNELP
                     VNHSPHFAPVLHPTLSTGVEAMVIAALAWLAV"
     gene            6139..6765
                     /locus_tag="VLJ38_08635"
     CDS             6139..6765
                     /locus_tag="VLJ38_08635"
                     /inference="COORDINATES: protein motif:HMM:NF015423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HSU39621.1"
                     /translation="MLEHELFILMDLLGTFAFAVSGAAAAREQRLDVFGAYAVAFLTA
                     CGGGIVRDLCLGVLPPAGISDWHYVACSGLAATMAIWASAWLDRLSYPVRLFDALGLG
                     FFAVAGAHKALTHGANIEAAIVLGTVTAVGGGVFRDVLLNRVPVILAKEIYALAALVA
                     AIIQVLAEVYRWRIAVTPWFAAGACFMIRFLALRYAWGLPLVSANERQ"
     gene            6786..>7557
                     /gene="ygiD"
                     /locus_tag="VLJ38_08640"
     CDS             6786..>7557
                     /gene="ygiD"
                     /locus_tag="VLJ38_08640"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: protein motif:HMM:NF007914.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HSU39622.1"
                     /translation="MSTVRMPAAFFGHGSPMNALEVNRYTSTWRAFGASVPRPRAILV
                     VSAHWFVGVTAVTAMPRPRTIHDFFGFPQQLFDVEYAAPGDTSFAQEVAEIAKPTSVG
                     LDHDSWGLDHGTWSVLVHAFPKADIPVVQLAIDARKEFDFHFELGARLAPLRERGVLI
                     LGSGNVVHNLRAIDWSKPEYGFDWAERFDARARAVMTERPHDAPALRNHADYRNAAPT
                     PEHFIPLLHLAGLASVAKQGAQVLTDGYTLGSISMTSFT"
BASE COUNT         1236 a         2597 c         2413 g         1311 t
ORIGIN      
        1 agtgcacccc ggcgcgagct cgagatcggc gaacgccaga cgatggtcgt gtccggtgat
       61 gagctgcgac gagttcagct cgagcagcgc cgagcaagcg tccccatcgc aggtgagcga
      121 aagcggttcg aacacggagt acccggtcgg aaagtaaccg ggttggttga cgggaatgga
      181 cgggagatcg atgggtatca acgtcggcga ttcccagccg caaccgagga gcgtgacgtc
      241 gtagccgtgc gcaacgagct tccccttttg gcatggtgcg tcgacctcgg agcagaccgc
      301 ctcgaaggtc gcggcagaaa tgtgacatac atcgaacgca ccagtcgatc gtgcatcttc
      361 gtggccgttg caggcggcgc gcgtgaggcc gatctcgcca ccgacctgaa cgaccgaaaa
      421 aacggggttc ttctcgttgg cgttgagctc ggtcacgggc attcccgtca cgactccggt
      481 gctcacggca aagtcagccg tgctcacccg cgtcaaagcc agcgcgccgt ccgtcgtcgg
      541 atgtgcgaac agcaactcgc cgtcatggaa gaacgccgcg gggacaccgg tcgcggggcc
      601 gccgttgatc gtgggcgcgc cgatggcaac gtcgagcacc ttgcgttgca tctcgccagt
      661 gacgccattc acgcgggcaa cgacgaggtg ctgcgccgcc gtgctcctgg aagacccgtt
      721 gcaaaaatag ccgagtactg cgtcgtcccc gaccgatcca atggcaacgc tgctcggttc
      781 tacgcagcca tcggtttcga ccgacgtcac gatggcattg gctgggttca tgaccgacag
      841 cgtgttcgcg gacgagaaag cgagccaaaa cgagttgagc gtaccgaccg ccgcgagcgg
      901 ctcgccctgc gcgtccatct ggctcgtcgc gaacagcttc ccctcggcgt cgtagaagtc
      961 gaaggtgatg ccgctcgcgg cggtgctcgg ccacgcgacg atttgggccg tggcgtcgcc
     1021 gaacaccaga gcggatcctg agagctcgcg cggaggcatg tcttgcgtga agatccaacg
     1081 accttccgag tcgacgtcgg cgatgcccgt gaaggccgtg ggattgctct tgcccgcgta
     1141 gcgaacacca gccgtcgtgg cgacgacgct cgacaggcag ccggtcgaga ccggcgcgcc
     1201 gatcgtgacg tggcgtacct ccacgggcgg cgctgcgccc gccgttccgg tctcaccggc
     1261 tcggcctccg gaaccgctcg taccgcctgt cgccgtcgcg ctgccggctg cccctgctgc
     1321 cgcctcgggc cgctcacgaa cgctccgccc gcaggccatt cccgcgcaac ccagaccgac
     1381 ggcgagcgtc agcgcgagtg gcgataggcc tgcaaacttt agcaagacgg caccggtatc
     1441 ttagtacgtg gagcgccgcc cggctcgccc gccgaaaacg aataacacca gcaaagcgac
     1501 gatgaattca cgcgagcggc tggttgagcg cctcctcacg cttgcccgtg ggcgaaaacg
     1561 taatacgggg ggagcgtggc gctgcttcta ttcctcctcg acctctattc gttcgtcctc
     1621 ttcgtgagcg tcgcgctttc gtggctgcgc ctgtctcccg ataatccggt cgtgcgggtg
     1681 acgagcgcgc tcaccgagcc gctgctcgcg ccgctcaggc gcgtgattcc tcccgtgggc
     1741 ggtttcgacc tcacgccgat ggcacttttg ctgttgatcc agctcgtgaa acggctcctc
     1801 actggctgat gaagtcgatt gtccgtgact cgcgcggaaa ctttcgtagg ctcgcgctcg
     1861 gtgtgaagca tggctgccac gagtttcgag tggtcggaag cgcctgagcc gcacgccgag
     1921 cgccggcgcg ccatgctggc gaagtacccc gaaatcaagc gcttgtacgg gccttgcgcg
     1981 cggacgaagt acgtctgcac ggcgctcgtc ctcgtgcagg tcctggccgc gtattgcctg
     2041 cgcgatgcgc cctggtggtg tgtactcgtc gtggcctact cgttcggggg cgtcgtcaat
     2101 caaacgctct tgctcgccat ccacgagctc tcgcacaacc tcgccttcga acgcccctgg
     2161 cagaaccggg tattcgcggt gttcgtcaat ctgccggtcg gcgtccccgt ggccgagacc
     2221 tttcgctact atcatctgct gcaccacgtg catcagggcg atccacgttt cgacacggat
     2281 ctgccgacgg agctcgaagc acgactcttg cgaggacgct tcgtcaagac gctctggctc
     2341 gcgttccagg gcttcgccta cgcgctccgc ccgctcgtcg ttcacccgaa aaaaccgagc
     2401 gctacggaac tcgccaatct gctcgtacaa gtcgtgttcg atctcgcggt gcttcacttc
     2461 tggggcgtga aggcgctcgc ctacctgccc atcggctcgc tcttggtcat ggggctgcat
     2521 cccgttgcag gccattacat ctcggaacat tacgtgttcc ggccgggaca agagacgtac
     2581 tcgtactacg gcccgctgaa cctcctcgcg ttcaacgtgg gctatcacaa cgagcaccac
     2641 gatttcccgt acgttgccgg ctcgcgtttg cctgcgctgc gtcgcacggc accggagttc
     2701 tacgactcgc ttcaccagca cgcttcgtgg accgcgacac tttggcacta tgtgacgcgt
     2761 tcggatctcg gcgggttcag ccgcatcaag cgcgcgcgtt gagtcagcgc ccgagtccat
     2821 ccgccgcgtg gctggccatt gtcgcatcac caccgacatg tccggtgcgg cacgcctggc
     2881 cgccgccagg tttcgtgttt cacgttggcc gttgaggcgg tcgcggaggt ggtccgcgtg
     2941 acaattccaa gaactcggga acctaaacgc cccgacgcgt acaaccatgg acgccaccat
     3001 ggcaacgaag cagcgcgcga cgaggtacga catcggagca ggatccgcga cactccctga
     3061 catcgtctcc gcgactggcg attgggacga cgacttccgt ccatcgaccc tcacggacga
     3121 gtccgcgcac ttcaacgagc agacggttcc cgatctcccg ctgcgcatct ccatgtcgac
     3181 gccgccgcag ccgcgcgctg cgacgaccac cgcaatcccg cgctcgggga cacgccatcg
     3241 cgcggtctcg gcaccgccgc cggctccgtc gctcgccgcg ctgccagttt ccggcgcttc
     3301 cgaggccgtc acaccggacg tgcccgaagg cgctcgtccg agcttcgtgc cgcacgcgaa
     3361 agcgcgcccc tcgacgtggg ctccgttcgc cgtcgcggtg acgggtatcg ctgccgccgt
     3421 cggcgtggcg ctcggcaatg cgagtttgac gtggcacttc ggagcgagtg aatccgtcgc
     3481 gccgttcggg tccgctgcgc cgcgcgctgt cgcgccggcg ctgccggtcg tgctcgcgcg
     3541 ttccgcggaa cctcacgcga cagcgagcgc gaagctcgaa gctcgctcgc ccccgctcac
     3601 cgttccggag gtgcgctacg aagatttgcc catcgccgac aaggacgcgc aaagcagaag
     3661 cgacacccga aacgccgcca cgcgccggca gcggctcaag gctcgcgcgc ggtaaaccaa
     3721 cccacgagct cgctcagcgc ggcgccgcgc acgtcctcgc gcagccgagc gcccgcgagc
     3781 tcgtgcttca acgcggcgcg accgcgcgaa agtcggctct tcacggtacc gacggggatg
     3841 ccgagctcgc gtccgatttc gtcgacggat agctcctccc aataaaattt cctcagcacg
     3901 acggacaggg ccggctcgac gcgcccgagc gcggacacga ggatcacctg ctcctggcgc
     3961 acggcggcga gctgactcgg gccgtcttcc ggcgacgtat tcagcgtgat cggctcgtgc
     4021 gcggcgaacg cctcggcgcg ccggaacgac aggtactgat tgcgcgcgat gccgaacagg
     4081 tacgtgcgaa acgtcgagcg tccctcgaag cgcccgaggc cctgcgtgca ggcgagcagc
     4141 gtgcgctgca cgagctcttc ggcgttctgc gccgcgcgtc gtccgaaaaa gacggtgagc
     4201 tcgggcacgt aacgatggag caactgatcg ccggctttgc gatcccccga gcgccaatgg
     4261 cggagcaatg tgttggtggt gtcttcgcgc gacatggagc aacccctgac cttcaagact
     4321 aaagcttcgc gcgcgcgcgg caacacggat tcaagagtgc agggcgtaga gctcccacat
     4381 gacgctgccc tctcccacaa ggtgcgtctc gcagcagccg gcagtttttc gacggcgtgc
     4441 tgcgtgaagt ctcactcgaa acgcaagcga tccaccacgg ccccgagctc gagcggcggc
     4501 gaaaacgccc gctggagttc ggtttggatc tcgagcagta cgtcgccgcc gctctcgtcg
     4561 agcggcaggt cgaccgggat gatcggattg tcttcgccgc tcgccagagc gcccgtcgtc
     4621 gctcggcgca agcggcgaga acggcacgcc gacggagcga tacaccacgg tcttaccgcc
     4681 gacgacaacc cgagcgtgta accgaccgag cccgctcgca accagggctc gcgtgcggcg
     4741 caaattggcc cactaaagca cgccgtcctg tcgactaccc acggcgggcc gtccagttgt
     4801 ccgcgcgcag aggtcgtgca agcctcgctc acgcacagca cggagtgaaa tatgccttct
     4861 agtaccggct cctcaacggg tgcgtccgca gcgctgtcgg gtctcgaagg gcaattgcag
     4921 gctctggagg ccctgtacca ggatctgcac tcgcaccccg agctgtcgat gcgggagtct
     4981 cgcactgccg gcattgctgc agaccgactg cgcgcggctg gattccaggt cactgcggga
     5041 gtcggtggga cgggagtggt cggcttgctc gagaacggcg cggggccggc cgtgatgctc
     5101 cgtgcggaca tggatgcgct cccgatcgca gaagcgacgg gcctccctta cgcgagcaac
     5161 gtgacggtga cggacgagac cggaacgagc gtgcccgtgt cgcacatgtg cggccacgac
     5221 atgcacgtca cgtggctcgc cggcgccgcc acactgctcg cggcagcacg cgacgcttgg
     5281 cacggcacgt tactcgtcgt cttccaaccc ggtgaagaga cggcgcaggg cgcgcgggcc
     5341 atgatcgatg acgggctctt gaagaggttt ccgaagcccg acatcgttct cgggcagcac
     5401 gtcatgctcg gccgcgccgg agacgtcgcc ggtagctccg ggccaatcac gtcagccgcg
     5461 gacagcctgc aaattcgcct gttcggccgc ggcgcccacg gctcgatgcc gcaggccagc
     5521 atcgatcccg tcgtcatggc ggctgcgacg gtgctacggc ttcagaccat cgtctcgcgc
     5581 gaagtggccg ccgccgaagc ggctgtgatt accgtgggcg tgctccaagc gggcacgaag
     5641 gagaacgtca ttcccgatga ggcgatcatc aagctgaacg tcagaacgtt cgacgcgggc
     5701 gtgcgggagc gcgtgctcgc cgcaatcgag cggattgcga acgccgaagc cgcggcttcg
     5761 ggcgcgcccc gcaaaccgga gatcacgacg ctcgaccgct acccgctcaa cgtgaacgac
     5821 gcggcggcga gcgcgcgcgt cgccgcagcg ttccgcgcgc atttctccga aagtcgcgtc
     5881 catcacaccg gtcccgcgcc ggcgagcgag gactttggct gcttcggaac cgagtggcac
     5941 gccccttccg ttttctggtt cgtgggcggc accgagccag cggcctatga gcaggccaag
     6001 caggcgggcc gactgaacga gttgccggtg aaccacagtc ctcatttcgc gcccgtgctc
     6061 cacccgacgc tgagcacggg ggtcgaagcc atggtcatcg ctgcgctcgc gtggctcgcc
     6121 gtttgagggt gctgcgccat gctggagcac gagctcttca tcctcatgga tctgctcggc
     6181 acgtttgcgt ttgcggtgag cggcgcggct gcggcgcgcg agcagcggct cgatgtgttc
     6241 ggcgcttacg ccgtcgcctt tttgaccgcg tgcggtggcg gcatcgtgcg cgacctttgc
     6301 ctgggcgtgc taccgcccgc gggcatctcg gattggcact acgtcgcgtg ctcggggttg
     6361 gcggcgacga tggcgatctg ggcgagcgcg tggctcgacc gcctcagcta tccagtgagg
     6421 ttgttcgacg cgctcggcct cggctttttc gccgtcgccg gggcgcacaa ggcgctcacg
     6481 cacggcgcaa acatcgaagc cgccatcgtc ctcgggaccg tcaccgccgt cggtggcggc
     6541 gtgttcagag acgtgctgct caatcgcgtc cccgtgattc tcgcgaagga gatctacgcg
     6601 ctcgcggcgc tcgtcgcggc catcattcag gtcctcgccg aggtgtaccg ctggcgcatt
     6661 gcggtgacgc cctggttcgc ggcgggagcg tgtttcatga ttcgcttcct ggctctccgg
     6721 tatgcgtggg ggcttcccct cgtcagcgcg aatgaaaggc aatgattttg gcaaacacga
     6781 ccgaaatgtc gactgtgcga atgcccgccg ccttcttcgg gcacggcagt cccatgaacg
     6841 cgctcgaggt aaaccgctac acgtcgacgt ggcgtgcctt cggcgccagc gttccgcgcc
     6901 cacgtgcgat cctcgtcgtc tccgcgcact ggttcgtggg cgtgaccgcc gtcaccgcca
     6961 tgccgcgccc gcgaacgatc cacgatttct tcggcttccc ccagcagctc ttcgacgtgg
     7021 agtacgccgc gccgggcgat acgtccttcg cgcaggaggt cgccgagatc gccaaaccga
     7081 cgagcgtcgg gctcgaccat gacagctggg gtctcgatca cggcacctgg tccgtcctcg
     7141 tccacgcgtt tcccaaagca gacattcccg tcgttcagct cgcgatcgac gcgcgcaagg
     7201 agttcgactt tcacttcgag ctcggcgccc gtctcgcgcc gctccgcgaa cgaggtgtgc
     7261 tcatcctcgg cagcggcaac gtcgtccata acctccgcgc catcgactgg tccaagcccg
     7321 aatacggctt cgactgggcc gagcgcttcg acgcccgagc gcgcgccgtc atgaccgaac
     7381 gcccgcacga cgccccggcg ctgcgcaacc acgcggacta tcgcaatgcg gctccgacgc
     7441 ccgagcactt catcccgctc ttgcacctgg ccggcctcgc ctccgtcgca aagcaaggcg
     7501 cgcaagtgct cacggatggt tacacgctcg gctcaatttc catgacctcg ttcactc
//
LOCUS       DATIML010000495         3148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1833271, whole genome shotgun sequence.
ACCESSION   DATIML010000495 DATIML010000000
VERSION     DATIML010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3148
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1833271"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VLJ38_08645"
     CDS             <1..609
                     /locus_tag="VLJ38_08645"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HSU39623.1"
                     /translation="MLLFFRNDTGLGGNNGLTDFKQIYGWPLALSQTKRMLYVLTAAS
                     LLLTYLLCRYVVTGKIGRVLRAVRDAESRVMFLGYDTRNYKLFAWTFSAVLCGLAGAL
                     YVPQVGIINPSELQPSNSIEMAIWAAVGGRGTLVGAALGAFVVNGAKSWFTVALPELW
                     LYVLGALFILVTLFLPEGLVGAANKLLEKRGAKVAVAAGGKS"
     gene            606..1538
                     /gene="urtD"
                     /locus_tag="VLJ38_08650"
     CDS             606..1538
                     /gene="urtD"
                     /locus_tag="VLJ38_08650"
                     /inference="COORDINATES: protein motif:HMM:TIGR03411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding protein UrtD"
                     /protein_id="HSU39624.1"
                     /translation="MTLSAPASTLQSDSVDEDDRPTSEPPTVPLKPSIPAADPARPKS
                     GRRRAVSQERLATLVKGRKAVLCVDNVSVSFDGFKALNELTLILDEGELRCIIGPNGA
                     GKTTLMDCITGKTRPDEGNVYLVGYGEDLIGLSEHEIAGLGICRKFQRPTVFGGHSVF
                     ENLELALAGNRSVWRSLFGGLSKAEAEVIDETLETIGLKDARERPAGQLSHGQKQWLE
                     IGMLLAQKPRVLLVDEPIAGMTHAETERTAELLVSLAGERTVVVVEHDMEFVRNIASR
                     VTVLHEGRVLAEGSLDQVQANPEVVQVYLGAEHA"
     gene            1531..2223
                     /gene="urtE"
                     /locus_tag="VLJ38_08655"
     CDS             1531..2223
                     /gene="urtE"
                     /locus_tag="VLJ38_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HSU39625.1"
                     /translation="MLDVAGLNQGYAGSQILWNMALEVPEGSCTCVMGRNGVGKTTLL
                     RSIMGAAKIMSGKITFAGKELTGSPPEVRARRGVGYVPQGREIFPQLTVGENLELGVV
                     ASGRRKQLPERVFELFPVLKSMLHRRGGDLSGGQQQQLAIGRALALRPKLLILDEPTE
                     GIQPNIVSEIGDILIRLNREEGLTLLLVEQKLAFARRVASRFVIMDRGRSVATGAMSD
                     LSDELVSRHLTV"
     gene            2381..>3148
                     /locus_tag="VLJ38_08660"
     CDS             2381..>3148
                     /locus_tag="VLJ38_08660"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU39626.1"
                     /translation="MVRTAEHAPRALHAAEPVAFGRAARYTLLAVMAYQGLTTPILGV
                     TAPWVVKRFGLTATSLAELYALMSLSAFVTFGAARLADRVGRRRVLLWCLVSTSVMAL
                     GAALSNSITTFAVCELLRFSSVGAITNSAITLHAEAASDSSARASAVGKLGMAAALGG
                     ASLLAVMPLAARLPDSFRWIYLGATSGVLFVPALKRFVPESARWQQARSTGVVLRSSI
                     FSVFTGRWARRAFVIVGASLLGGVEGAAVGSWSYYYGV"
BASE COUNT          489 a         1059 c         1048 g          552 t
ORIGIN      
        1 atgctgctgt tcttccgcaa cgacacgggc ctcggcggta acaacgggct cactgacttc
       61 aaacaaattt atggctggcc tctcgcgctc tcgcaaacca agcgcatgct gtacgtgctc
      121 acggcggctt cgctcctgct cacctacctg ctctgccgtt acgtcgtgac gggcaagatc
      181 ggccgcgtgc tgcgcgccgt gcgcgacgcc gaaagccgcg tgatgtttct cggttacgac
      241 acgcgcaact acaagctctt cgcctggacc ttctccgcgg tgctctgtgg actagccggc
      301 gcgctctatg tgccgcaagt cggcatcatc aacccgagcg agcttcagcc ctccaattcg
      361 attgaaatgg cgatttgggc ggccgtcggc gggcgcggca cgctcgtcgg cgcggcgctc
      421 ggcgccttcg tcgtgaacgg ggccaagagc tggttcaccg tagcgctgcc ggagctctgg
      481 ctctacgtgc tcggcgcgct cttcatcctc gtcacgctat ttttgccgga ggggctcgtc
      541 ggggcggcga acaagctcct cgaaaagcgg ggcgcgaaag ttgcggtcgc ggccggaggc
      601 aaatcatgac gctgtccgcg cccgccagca ctttgcagag cgactcagtc gacgaggacg
      661 atcggccgac cagcgagccg ccgacggtgc cgctcaagcc aagcatccca gctgctgacc
      721 ccgcccgacc caagtcgggc cggcgccgcg ccgtgagtca agagcggctc gccacactcg
      781 tgaagggccg caaggcagtg ctctgcgtcg acaacgtgag cgtgagcttc gacggcttca
      841 aagcgctgaa cgagctcacg ctgatcctcg acgagggcga gctccgctgc atcatcgggc
      901 cgaacggcgc cggcaaaacg acgctcatgg actgcatcac cggcaagacg cgcccggacg
      961 aaggcaacgt gtacctcgtc ggttacggcg aggacctgat tggcctctcc gagcacgaga
     1021 tcgcaggcct cggcatctgt cgcaaattcc agcgtcctac cgtcttcggc ggccacagcg
     1081 tgttcgaaaa cctcgagctt gccctggccg gcaatcgttc cgtctggcgc tcgctcttcg
     1141 gcggactcag caaggccgaa gccgaagtca tcgacgagac gctcgagacc atcgggctca
     1201 aggatgcgcg cgagcgcccg gcgggccagc tctcgcacgg gcagaagcag tggctcgaaa
     1261 tcggcatgct gctcgcccaa aagccgcgcg tcttgttggt cgacgagccc atcgccggca
     1321 tgacgcacgc cgagacggaa cgcacggcgg agctcttggt gtcgctcgcg ggcgagcgca
     1381 ccgtcgtcgt ggtcgagcac gacatggagt tcgtgcgcaa tatcgcgagc cgcgtgaccg
     1441 tgctgcacga aggtcgcgtg ctcgccgagg gctcgctcga ccaggtgcag gccaaccccg
     1501 aagtggtcca ggtttacctt ggagcggaac atgcttgacg tcgcgggact gaatcagggc
     1561 tacgcgggca gtcaaatcct ctggaacatg gcgctcgagg tgcccgaagg ttcgtgcacc
     1621 tgcgtcatgg gccgtaacgg cgtcggcaag acgacgctgc tccgctcgat catgggcgcg
     1681 gccaagatca tgagcggcaa aatcacgttc gccggcaagg agctcacggg ctcgccgccg
     1741 gaggtgcgcg ctcgccgcgg cgtcggttac gtgccgcaag gtcgcgagat ttttccccag
     1801 ctcaccgtcg gcgaaaatct cgagctcggc gtggtcgcga gcggccggcg taagcagctc
     1861 cccgaacgcg tgttcgagct cttccccgtg ctcaagagca tgctgcaccg ccgcggcggc
     1921 gacctgtcgg gcggccagca gcaacagctc gccatcggac gcgcgctcgc gctccgtccc
     1981 aagctcttga ttttggacga gccgaccgag ggtatccagc cgaacatcgt gagcgagatc
     2041 ggtgacatct tgatccgctt gaaccgcgag gagggactca cgctcttgct cgtcgagcaa
     2101 aagctcgcgt tcgcgcgccg cgtcgcctcg cgcttcgtca tcatggaccg cggtcgctcg
     2161 gtcgcgacgg gagcgatgag cgacctgagc gacgaactgg tgagccgcca tttgacggtg
     2221 tgattgaaag ctttccgccg ctacgcgagc gtgcgccgcg agtggcgtta aaacggcgct
     2281 gaggacggcg ctcgggtccg agacttgcac ctcgttgggg gtttctcagg cgcgaggacg
     2341 tcccttgagc agcgtgcacg gccactcatc cgtcgaacct ttggttcgta cggccgagca
     2401 cgcgccgcgc gcactgcacg cggcggagcc cgtcgctttc ggccgcgccg cccgctacac
     2461 gctgctcgcg gtgatggcct accaaggcct cacgacgccg atcctcgggg tgaccgcgcc
     2521 ctgggtggtc aagcgcttcg gactcacggc gacgagcctc gccgagcttt acgcgctgat
     2581 gtcgctctcg gcgttcgtga cgttcggcgc cgcgcggctc gccgaccgcg tcggccgccg
     2641 gcgggtgctg ctctggtgcc tcgtgtcgac gtcggtgatg gcgctcggtg ccgcactgtc
     2701 gaactcgatc acgacgttcg cggtgtgcga gctcttgcgc ttctcgagcg tcggcgccat
     2761 cacgaacagc gcgatcacgc tccacgccga agcggcgtcc gattcgtccg cgcgcgcctc
     2821 ggccgtcggc aagctcggca tggcggcggc gctcggcggc gcgagtttgc tcgcggtgat
     2881 gccgctcgcc gcacggctcc cggattcgtt tcgctggatt tacctgggcg cgacctccgg
     2941 cgtgctgttc gtgcctgcgc tgaagcgctt cgtgcccgag agcgcacgct ggcagcaggc
     3001 gcgctcgacg ggggtcgtgc tgcgttcctc gattttcagc gtgttcacgg gccgctgggc
     3061 acgccgtgcc ttcgtcatcg tcggcgcgag cttgctcggc ggcgtcgagg gcgcggccgt
     3121 cggcagctgg tcctactact acggcgtg
//
LOCUS       DATIML010000496         1705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2407376, whole genome shotgun sequence.
ACCESSION   DATIML010000496 DATIML010000000
VERSION     DATIML010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2407376"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..587
                     /locus_tag="VLJ38_08665"
     CDS             <1..587
                     /locus_tag="VLJ38_08665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU39627.1"
                     /translation="YRLPDGASVTVGRDTGSIFAGDSYLSPRHATFTRRGAQLSIRDE
                     GSLNGVYLKLKPQDPNLLEYGDVFRIGQEIIRFEELRGLGPSPDGVERFGSPAKGYIG
                     RLALVIGRDTTGNAFPIPERGVHCGRERGDILFSEDGYVSGLHCQVARAGDGKVYITD
                     LGSSNGSFIRLRSERPVTGGDILLMGQQLFRVDL"
     gene            627..1022
                     /locus_tag="VLJ38_08670"
     CDS             627..1022
                     /locus_tag="VLJ38_08670"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HSU39628.1"
                     /translation="MTARPTIRVVAAVLERDGRYLITQRRATAVLPLLWEFPGGRVEA
                     GETDSTALKRELLHRLGVSIDPGQLISFVTHPYEKYAVDLFLYECTLVGGEPRPLNVA
                     DFRWVKSAEFDRYPFTPADEASMSKLLGL"
     gene            1112..>1705
                     /locus_tag="VLJ38_08675"
     CDS             1112..>1705
                     /locus_tag="VLJ38_08675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HSU39629.1"
                     /translation="MATKFFDQTNAWLERALDALSPASCAACAGARAGKPPFCVTCGE
                     PAPALPGTLDGVPLVAAGVYEAPLEPAIARFKFGGHSELSRALAGLLAATIQPFSLGE
                     VTFVPVPLHRYRLVERGYNQSALLATRLARELGGSALPRALERVRSTDQQARLGRDAR
                     AENVRGAFRARAGRMPPRVVLVDDVVTTGATARACLKA"
BASE COUNT          256 a          581 c          568 g          300 t
ORIGIN      
        1 aataccgtct cccggacggc gccagcgtca cggtgggccg cgacacgggc tccattttcg
       61 caggtgacag ctacctttcg ccgcgtcacg cgacgttcac gcgccgcggc gcgcagctct
      121 cgatccgcga cgagggctcg ctcaatggcg tctaccttaa gctcaagccc caggatccga
      181 acctgctcga gtacggcgac gtcttccgca tcggccaaga gatcattcgc ttcgaggagc
      241 tgcgcggctt gggcccgtca ccggacgggg tcgaacgctt cggcagcccc gcgaagggct
      301 acatcggccg gctcgcgctc gtgatcggtc gcgacaccac gggcaacgct tttccgatcc
      361 ccgaacgcgg cgtgcactgc ggtcgcgagc gcggagacat cctcttctcg gaggacggct
      421 acgtgtcggg cctgcattgc caggtcgctc gcgcaggcga cggcaaggtg tacatcaccg
      481 atctcggtag ctcgaacggc agcttcattc gtctgcgcag cgagcgcccc gtcacgggcg
      541 gcgacattct gttgatggga cagcagctct ttcgggtgga tttgtgaggc ggcgcgcgac
      601 gtcgtagacg ttcgcgcctg cgtgacatga ccgctcgtcc cacgatccgc gtcgtcgccg
      661 ccgtactcga gcgcgacggg cgctacctca tcacgcagcg ccgggcgacg gcggtgttgc
      721 cgctgctctg ggagtttccg ggcggccgcg tcgaagcggg cgagaccgat tcgacggcgc
      781 tcaagcgcga gctcttgcac cggctcggcg tcagcatcga ccccggacag ctcattagct
      841 tcgtgacgca tccgtacgaa aagtacgcgg tcgatctgtt cctctacgag tgcacgctcg
      901 tcggcggcga gccacgcccg ctgaacgtcg ccgattttcg ctgggtgaag agcgccgagt
      961 tcgatcggta tccgttcaca cccgccgatg aagcgtcgat gagcaaactg ctcgggctgt
     1021 gaggccctgg gacctgcggc cacagctagc aactcgcctt ggcggcggtc gatccgtcga
     1081 cgctcggccc gacgcggttc cgggctccag catggcgaca aagttctttg accaaaccaa
     1141 cgcctggctc gaacgcgcgc tcgacgcgct ttcgcccgca agctgtgcgg cctgtgcggg
     1201 agcgcgcgcg ggcaagccgc ccttctgcgt cacttgcggc gagccggcgc ccgcactgcc
     1261 cggtacgctc gacggtgtgc cgctcgtcgc tgcgggcgtt tacgaagcgc cgctcgagcc
     1321 tgcgattgcg cgcttcaaat tcggtggcca ttccgagctt tcgcgcgcgc ttgcgggtct
     1381 gctcgccgcg acaatccagc cattttcgct gggtgaggtg acgttcgtgc cggtgccgct
     1441 tcaccgatat cggctcgtag aacgtggcta taaccagagt gcgttactgg ccactcgctt
     1501 ggcacgcgag ctcggcggca gcgcgctacc gcgagcgctc gaacgcgtcc ggagcaccga
     1561 ccagcaagcg cgactcgggc gcgacgctcg tgcggaaaac gtgcggggcg cgttccgtgc
     1621 tcgggcgggt cgcatgccgc cacgcgtcgt gctcgtcgat gatgtcgtga cgacgggggc
     1681 gaccgcacgc gcctgcctga aagcg
//
LOCUS       DATIML010000497         2365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2407540, whole genome shotgun sequence.
ACCESSION   DATIML010000497 DATIML010000000
VERSION     DATIML010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2365
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2407540"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..607)
                     /locus_tag="VLJ38_08680"
     CDS             complement(143..607)
                     /locus_tag="VLJ38_08680"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSU39630.1"
                     /translation="MGPARVEENHEMHENHHEGQCFCGAVAVRVTGKPVAMGYCHCAS
                     CRAWSAGPVNAFSLWPPAAVSITRGAEHVTSFSKTPNSVRKWCKLCGGHLLTDHPGFG
                     LVDVYAAVLEGLRFTPELHVNYGETVLPMHDGLPKQRDFPKELGGSGELAAE"
     gene            732..1286
                     /locus_tag="VLJ38_08685"
     CDS             732..1286
                     /locus_tag="VLJ38_08685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39631.1"
                     /translation="MSKPDKRVPEIVRAAEELESELVKLETLSRTARKNRLDSEKGIV
                     RAAKDLSEALALPERLAGGLRGLANAMREMEARQQAALEPLAAYAVEVQTRMKKLEEH
                     MRAFAALGQAAGEATALLQSAGERADLVESAKVQLSGIADGARVLIEAARADDFPDVA
                     READALKQRVTALRRKLDGALPPN"
     gene            1423..>2365
                     /locus_tag="VLJ38_08690"
     CDS             1423..>2365
                     /locus_tag="VLJ38_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39632.1"
                     /translation="MLRSIHASRLAATRLAYSLGRGLTGCLALTACGSEPTPATSQSA
                     QGGAAAQGGARSMQGGKANSAGKAGAAGQALGGRAATAGTGGRSSGGTKGSSGQGSSG
                     QASNGGGPAAAGNTASGAGGRASSAGNSSVGAAGVDAGAAGEGGSSTAGSLDPFGVQM
                     LYPTLPGGKAWYAKWDAEPRSFDGQDPADAWFDADHGDASYHTDGDGILQITGSVPRM
                     YVHDPSLVDQWQNVEVTMYFMRVADDATPWGGLVALTRTNHGTIGDETVNLCDTRGID
                     ARMRYDGNIDFEKETSHPDSVSIMTKQQWAGGLPKNRW"
BASE COUNT          423 a          788 c          826 g          328 t
ORIGIN      
        1 cgtgacgagc gacggcgacg tgtgcgtgta caacacgggc gacaccgtga cgcgctgcga
       61 gctctgatcg ctgacgtgag gttctgaacc ccgaaacggg gcgcctgagg gcgccccgtt
      121 ttgcttttgt cggtgcgcgc gtttactcgg ccgcaagctc tccggagccg ccgagctctt
      181 tcgggaagtc gcgctgcttc ggcaaaccgt cgtgcatggg caacaccgtc tcaccgtagt
      241 tgacgtgcag ttccggcgtg aagcgcagac cctcgagcac cgccgcgtaa acgtccacca
      301 agccgaagcc gggatggtcc gtcaaaaggt gcccgccgca gagcttgcac cacttacgca
      361 cactgttcgg cgtcttgctg aagctcgtga cgtgctcggc gccacgggtg atgctgaccg
      421 cggccggcgg ccacaagctg aacgcgttga cggggccggc cgaccacgcc cggcacgaag
      481 cgcagtggca gtagcccatc gcgacgggct tgccggtgac gcgcacggcc actgccccgc
      541 aaaagcattg tccttcatgg tgattttcgt gcatttcgtg gttctcctcg acgcgggcag
      601 ggcccatcgg gggtcccggt gccgcgcgct tcccaagagc tagggaccaa acagtgtggc
      661 gagaatgact cggcgaccgc cgcgcttgac cgaaaagccg aaaccacgtg actgttcgtc
      721 cgagcgcgag catgagcaaa cccgacaaac gcgtgccgga gatcgtgcgg gcggccgaag
      781 agctcgagag cgagctcgtg aaactcgaga cgctctcgcg cacggcgcgg aaaaaccggc
      841 tcgattccga aaagggcatc gtgcgcgccg ccaaagacct ttcagaagcg ctggcgctcc
      901 ccgagcggct cgcgggagga ctgcgcgggc tcgcgaacgc gatgcgcgag atggaggcgc
      961 ggcaacaggc ggcgctcgag ccgctcgctg cctacgccgt cgaggtgcag acccgcatga
     1021 agaagctgga agagcacatg cgcgcgttcg cggcgctcgg ccaagccgcc ggtgaggcga
     1081 ccgctctctt gcaaagcgca ggagaacgag ccgacctcgt cgagagcgcc aaagtgcaac
     1141 tgagcggcat cgccgacggc gcgcgggtcc tgatcgaggc ggcgcgcgcc gacgacttcc
     1201 ccgatgtggc tcgtgaggcc gacgcgctca aacaacgcgt gacggctctg cgccgcaagc
     1261 tcgacggcgc attgccaccg aactgacgtt ccgtcatcgc ggtcgcctgc cgcggacttc
     1321 cgccggacgc gacctttcac ggcccgctga ttgttgagcc gcttggcggg cgccgcggta
     1381 cgaaaaagga caggcgccct gtgcgcgccg agcttcgtcc agatgctgcg ctcgattcac
     1441 gcttcgaggt tggccgcaac gcgcctcgcc tattcgctcg gtcgcggact caccgggtgc
     1501 cttgcactca ccgcgtgcgg cagcgaaccc acgccggcga cgagccaaag cgcgcagggc
     1561 ggcgctgccg cgcaaggcgg cgcgcgaagc atgcagggcg gcaaagcgaa cagcgctggc
     1621 aaggccggtg ccgcgggcca ggcgctaggc ggacgcgccg caacggcagg cacgggcggg
     1681 cgctcgtcgg gcggcacgaa gggctcgagc ggacagggct cgagcggaca ggcctcgaac
     1741 ggcggcggac ccgctgcggc tggcaatacc gcgagcggcg ccggcggacg cgcgtcgagt
     1801 gccggcaact cgagcgtcgg agcggccggg gtcgacgctg gagcggctgg tgaaggcgga
     1861 agctcgacgg caggttcgct cgatccgttc ggcgtgcaga tgctttaccc cacgctgccc
     1921 ggcggcaagg cgtggtacgc gaagtgggac gccgagccgc gcagcttcga cggccaagat
     1981 cccgccgacg cgtggttcga cgctgatcac ggcgacgcga gctatcacac cgacggcgac
     2041 ggtattttgc aaatcacggg ctcggtgccg cgcatgtacg tgcacgatcc gtcgctcgtg
     2101 gaccaatggc agaacgtcga ggtcaccatg tacttcatgc gcgtcgccga cgacgccacg
     2161 ccgtggggcg gcctggtcgc gctcacgcgc accaatcacg gcacgatcgg cgacgagacg
     2221 gtgaacctgt gcgacacgcg cggtatcgac gcccgcatgc gctacgacgg caacatcgac
     2281 ttcgagaagg agacgagcca ccccgactcc gtctcgatca tgacgaagca gcagtgggca
     2341 ggcggcctgc cgaaaaaccg ctggc
//
LOCUS       DATIML010000498         3391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1543373, whole genome shotgun sequence.
ACCESSION   DATIML010000498 DATIML010000000
VERSION     DATIML010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1543373"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="VLJ38_08695"
     CDS             <1..378
                     /locus_tag="VLJ38_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSU39633.1"
                     /translation="EAKDLGTGRAQTVSVKPTSGLAQGEIDKLIQEGERYKESDELRR
                     DLAEMRNQAETLAYTTEQALEGYADLIEAAKLDEVRARVALLRDLLKSGAPLDALRSA
                     YAELEASTFELAEALYGEPAGTT"
     gene            685..1437
                     /locus_tag="VLJ38_08700"
     CDS             685..1437
                     /locus_tag="VLJ38_08700"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSU39634.1"
                     /translation="MSGVRGAKRAAQLPLRFPFTWGGARRGAGRKPGPRRNTPHHARP
                     IHRAAEPVHVTLRARISPLRSQFVFPTVRLAISRAARRDPERFRVIHFSVQRDHVHLV
                     VEATDARALSSGVRSIAIRIARYVNDLLSRRGRFWADRWHGRALRTPREVRNAIVYVL
                     ANFRKHARQVIPSGMDPFSSAAWFDGWREWRSESGVPPPFAESAPWCRTREVAAEEVN
                     SNTAESSTARTWLARHGWRKYGLLGLAEAPVT"
     gene            complement(1799..3202)
                     /gene="dnaA"
                     /locus_tag="VLJ38_08705"
     CDS             complement(1799..3202)
                     /gene="dnaA"
                     /locus_tag="VLJ38_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020464715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HSU39635.1"
                     /translation="MQRAVEAFRHAAESTRRRSPASFDQWFSGIQLDAIEDGVLSLAA
                     RDEFVRDWVKNHFLPDLLDAMKGYLGGEPAPGLEVRWRIGDIPKPVSDPRRSAPPPPS
                     RRPSDLPPPPRPRIAAVPRTSLADALNPKHTFSNFVVGPSNELAYAAALASAAGGRPR
                     YNPLFIAGNTGLGKTHLMHAIAHQVLAERPDTRVVYVSAEHFTNAFIEALQHHKMDEF
                     RARYRSHCDLLLVDDIQFLAGREQTQEEFFHTFNALHDADRLIVVTSDKYPQQLQRMP
                     ERLVSRFGSGLVADIQVPQLETRVAIVRKKAALEGIDMSDEVAVLLAQGVPSNVRELE
                     GALIRLAAKASLTGRPIDLEFVRAELALVSPRHPDVMSVEDIQRAVCSHFRLSNAELL
                     SKDRHKSVAFARQVAMYVCRQRLKSSFPELGRAFGNRDHTTVMSAVRRVETLRQRDPQ
                     VNAHLEAIEQKLASSED"
BASE COUNT          577 a         1039 c         1192 g          583 t
ORIGIN      
        1 gaagccaaag acctcggcac gggtcgcgcg caaaccgtga gcgtcaagcc cacgagtgga
       61 ctcgcgcagg gcgagatcga caagctcatc caagaaggcg aacgctacaa ggaatccgac
      121 gagctccgcc gcgacctcgc cgaaatgcgc aaccaagcgg agaccctcgc ctacaccacc
      181 gaacaagcgc tcgagggcta cgccgacctc atcgaagccg ccaagctcga cgaagtccgc
      241 gcccgcgtcg cgctgctgcg cgatttactc aagagcggcg caccgctcga cgccttgcgc
      301 tcggcgtacg ccgagctcga agcgagcacg ttcgagctcg ccgaagcgct gtatggagag
      361 cccgcgggga cgacgtaacg cgaggttcgg ggagtgacgg cggggttcgg cgacgtgcgg
      421 ggagtgacgg cggggttcgg cgacgtgcgg tgacgtgacg gcggggttcg gcgatgtgcg
      481 gtgacgtgac ggcggggttc gggacgtgcg gtgacgtgac ggtggggttc ggtaacaacg
      541 ctgatagcgg ggttgagatt tcttgattca gctttggaac ggtgaccctc gtgaagggac
      601 gtcgaaattc acagcgcatg acggcgtttg aactccactg cttacttgac gaagcatagg
      661 aatgctgcta tggcttgatt caagatgtcc ggggttcgag gcgccaaacg tgctgcgcag
      721 ttgccgttgc gctttccgtt cacctggggc ggtgcgcggc gcggagccgg acgtaagcca
      781 gggccgcgtc ggaatacgcc gcatcacgcg cggcccattc atcgagcggc agagcccgtc
      841 cacgtgacgc ttcgggcgcg catctctcct ttgcgcagcc aattcgtgtt ccccacggta
      901 cgtctcgcca tctcacgcgc ggctcggcgc gatccagagc gatttcgggt catccatttt
      961 tcggtgcagc gcgaccacgt ccatctcgtc gtcgaggcga cggacgcacg cgcgctctcg
     1021 agcggtgtgc gcagtattgc gattcgcatc gcccgctacg tcaacgatct gttgtcgcga
     1081 cgtgggcgct tctgggcgga tcgttggcac gggcgcgcgc tcaggacgcc gcgtgaagtg
     1141 cgaaacgcca tcgtttacgt gctcgcgaac tttcgaaagc atgcgcgcca agtgattccg
     1201 agcgggatgg atccgttttc gtccgcggcc tggttcgacg ggtggcgcga atggcgttca
     1261 gagtccggcg tgccgccgcc cttcgcagaa tcggcgccgt ggtgtcgcac gcgcgaggtt
     1321 gccgcggagg aggtgaactc caatactgct gaatcgtcga cagcaaggac gtggctcgcg
     1381 cggcacggtt ggcgcaagta cggactccta ggattggcag aagcacccgt gacctgagcg
     1441 ggcgctcttc ggcagaaggc ggcgcgtggg acaacgctca gttgtgacct cgtcgtcgcc
     1501 agttctcgcg ctcgcccgaa atttggcgtg ttcgcctcct cagtcgcgag atcgcacgca
     1561 aaacaaagcg caactgcaac ggcgactcgc gtgcagtgcc gccaatgcca tcatcaatgc
     1621 gaacgagcgc cgacgcgtgc tgcgaacgag ccccgtgcgg catgccgcga aggcagcgcg
     1681 ccatcacgtc aacgcgcgcg gtcgggtcgt gccacgccgt tgcgcgtgat taccgcgtgg
     1741 taacctcgcg tcaccactgg gtcgcccgcc gttcgcctac gcagcgctcg ttcgccgctc
     1801 agtcttccga cgacgcgagc ttctgctcga tcgcttcgag atgcgcgttc acctgcgggt
     1861 ccctttgccg caacgtctcg acgcgccgga cggcgctcat gacggtggtg tggtcgcggt
     1921 tgccgaaggc gcggccgagc tcggggaagc tcgacttgag gcgctggcga cagacgtaca
     1981 tggcgacctg gcgcgcgaag gcgacgctct tgtgccgatc tttgctgagg agctccgcgt
     2041 tcgagaggcg gaagtggctg cagacggcgc gctggatgtc ttcgacgctc atcacgtcgg
     2101 ggtggcgcgg ggagacgagc gccaattcgg cgcgcacgaa ttcgaggtcg atggggcggc
     2161 ccgtgagcga cgccttggcg gccaagcgaa tcagcgcgcc ttcgagctcg cgcacgttgc
     2221 tcgggacgcc ctgagcgagc aggaccgcga cttcgtcgct catgtcgatg ccctcgagcg
     2281 cggctttctt gcgcacgatg gcgacgcgcg tctcgagctg cggcacctgg atgtcggcga
     2341 cgaggcccga cccgaagcgc gagaccaagc gctcgggcat gcgctggagc tgctgcggat
     2401 acttgtcgct cgtgacgacg atcaaccggt cggcgtcgtg gagcgcgttg aacgtgtgga
     2461 agaactcttc ctgcgtctgc tcgcggccgg cgaggaactg aatgtcgtcg acgagcagga
     2521 gatcgcagtg cgagcggtag cgcgcgcgga actcgtccat cttgtggtgc tgcagcgcct
     2581 cgatgaacgc gttcgtgaaa tgttcggcgg agacgtagac gacgcgcgtg tcggggcgct
     2641 cagcgagcac ctggtgcgcg atggcgtgca tcaggtgggt cttgccgagg cccgtgttgc
     2701 ccgcgatgaa aagcgggttg taacggggcc ggccgcccgc tgcggacgcg agtgccgcgg
     2761 cgtacgcgag ctcgttcgac gggccgacga cgaagttact gaacgtgtgc ttcgggttca
     2821 gcgcgtcggc gaggctcgtg cgcggcactg ccgcgatccg cggccgaggc gggggaggga
     2881 ggtcggatgg ccggcgcgag ggcggcggcg gcgcgctgcg gcgcgggtcg ctcacaggct
     2941 tcgggatgtc gccgatgcgc cagcgtacct cgagcccggg ggcgggttcc ccgccgagat
     3001 agcccttcat ggcgtcgagc aggtccggca agaaatggtt tttcacccaa tcgcggacga
     3061 actcgtcgcg cgcggccagg gaaagcacgc cgtcttcgat ggcatcgagt tgaatacccg
     3121 aaaaccactg atcgaatgac gcgggtgaac gccggcgcgt ggactcggcc gcgtggcgga
     3181 aggcctcgac tgctcgctgc atagcatctg acggaagctg aggggtgtcg ctggtcacgc
     3241 taaccaagtc cccatattgt ccacagggct gtggagtcac ggaagtttat cgacgagagc
     3301 gaagcaaccg cgcctaacac cgacctcgtt cgaagttcaa tgctcttggc ctcgttccaa
     3361 acgatgccgc acgaatgacg caggatcgtg a
//
LOCUS       DATIML010000499         2978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5010108, whole genome shotgun sequence.
ACCESSION   DATIML010000499 DATIML010000000
VERSION     DATIML010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5010108"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2815
                     /locus_tag="VLJ38_08710"
     CDS             <1..2815
                     /locus_tag="VLJ38_08710"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HSU39636.1"
                     /translation="DIKRWSWPIDHGLWDVVDLKEVVSVQAAGYGGGSLVYANVHLRP
                     PAAVFDDRWPVAYRDRKGLDTYFDLAATMLDVKPATSHPDFDSFTKSKTLAEVATRLG
                     RKDQFFYPPLAVTFKDGPNTHGVQQNACTACGRCSTGCPEKAKNTLDHNYLALAERHG
                     AKVVTECEVTCFSELPDGRFRVHCIDHLEGHEATYEAKYLFVCAGSVHSTRLLARAEL
                     VKNKDVQQRVGVGFFPGGDALGMIFDTAKPLHPELGPTITTTVVHNEDRDGEGHGRFF
                     LIQDGGYSNELSRLLGTVRAPAWVGRNRLSTAPVRHQDEPPGGDDEFHLPSLLDDILS
                     ALQGGELGAKMASSQLRAAWPKLVKELKDPLLLPAIVENTIKASLRKQFKRFWLIGRM
                     NPEKPPASRWIDWFCRLISKGFGGNDTLAEHALNAVLNQGGLKAAEVARQMFGYDASG
                     AAHRTMLLAMGRDAAPGVLQYDKGTDTLVADLDLYHLARGYSNEELLMTDIAKELGGE
                     LRTNPAWAFLGKPITVHNQGGCRMTDKSEYGVTDPNGAVHGYDTLFVLDGAALCSSVG
                     VNPSATITAIAERNIAHFLQTHAPERVNDAGRAEYRGQRALAAGFPERARDFQLEPPE
                     RPCVPFKSKPLGLRFDESMTGYYSPGTHRPPSDEEFRARERRGRPEYPLRVDLRLSSE
                     NLAKFWDDETHALRATGRITLVLPGDKEKRELPLSAGRVELMVPRYKPHGVPPNEHER
                     LVAQEYALLGQAAFERLSATELAELGTPAFPGRRHKTIAGSPPPRAERFLKYWLTFTH
                     DGKYFLVYGYKRVKDDPAFDAWRDTSSLYISLYQTQKDPDLSSVPSSGLLGAGVIHVD
                     MNEFMFKQLPSMFVAEGIDPERRAPGVPSTDDPGAVDPARATWAIAKFGWFFFGSLQR
                     VYAPEFGKVFETFFRLSEGSRPQ"
BASE COUNT          535 a         1046 c          936 g          461 t
ORIGIN      
        1 cgatatcaag cgctggagct ggcccatcga tcacgggctt tgggacgtgg tcgacttgaa
       61 ggaggtcgtg agcgtgcagg cggcaggcta cggcggtggc tcgctcgtct acgccaacgt
      121 ccatttgcgc ccgccggcgg cggtcttcga cgatcgctgg cccgtcgcct accgcgaccg
      181 caaaggcctg gacacttact tcgatctcgc ggcgacgatg ctcgacgtaa agcccgcgac
      241 gagccacccc gacttcgaca gcttcaccaa atccaaaacg ctcgcagagg tcgcgacgcg
      301 cctcggacgc aaagaccagt tcttctaccc gccgctcgcg gtcacgttca aggacggacc
      361 gaacacgcac ggagtgcagc agaacgcctg cacggcttgc ggtcgctgtt cgacgggctg
      421 ccccgagaag gcgaagaaca cgctcgatca caactacctc gccctcgccg aacgccacgg
      481 cgccaaagtg gtcaccgagt gcgaggtcac ctgcttctcc gagctgccgg acggccgctt
      541 tcgtgtccac tgcatcgatc acctcgaagg acacgaggcg acctacgaag caaaatacct
      601 cttcgtctgc gccggttccg tgcactcgac ccgcctgctc gctcgcgccg agctcgtgaa
      661 gaacaaggac gtgcagcagc gcgtcggggt cggcttcttc ccgggcggcg acgcgctcgg
      721 catgatcttc gacacggcaa agcccctgca ccccgagctc ggccccacga tcacgacgac
      781 ggtcgtgcac aacgaggacc gcgacggcga gggccacggc cgcttcttct tgatccagga
      841 cggcgggtat tcgaacgagc tttcacgcct gctcggcacc gtgcgcgctc cggcctgggt
      901 cggccgcaac cggctctcga cggcgccggt gcggcaccag gatgagccgc cagggggcga
      961 cgacgagttt catctgccgt ctctgctcga cgacatcctg agcgccctgc agggcggcga
     1021 gctcggcgcg aaaatggcgt cgtcacaact gcgtgcggcc tggccgaagc tcgtgaagga
     1081 gctcaaggat ccgttgctgt tgccggcgat cgtggaaaac acgattaagg cgtcgcttcg
     1141 caagcagttc aaacgcttct ggctcatcgg ccgcatgaat ccggagaagc cacccgcatc
     1201 acgctggatc gattggttct gcaggctgat cagcaagggc ttcggcggca atgacacctt
     1261 agccgagcac gccctgaacg ccgtgctcaa ccagggtggc ctcaaagccg ccgaggtcgc
     1321 gaggcaaatg ttcggctacg acgcgagcgg cgccgcacac cgcaccatgc tgctcgccat
     1381 gggccgagac gccgcgcccg gcgtcctcca gtacgacaag ggaacggaca cgctcgtcgc
     1441 cgatctcgac ctttatcacc tggcccgcgg ctattcgaac gaagagctct tgatgacgga
     1501 catcgccaaa gagctcgggg gagagctccg cacgaatccg gcgtgggcgt tcctcggcaa
     1561 gccgatcacg gtgcacaacc agggcggctg ccggatgacg gacaagagcg agtacggcgt
     1621 gacggacccg aacggcgccg tgcacggcta cgacaccctc ttcgtcctcg acggcgccgc
     1681 gctctgctcg tcggtcggcg tgaatccgtc ggcgaccatc accgccatcg ccgagcggaa
     1741 catcgcgcac ttcttgcaaa cgcacgcgcc cgagcgcgtg aacgacgccg gacgcgcgga
     1801 gtaccgcggc cagcgcgcac tggcggccgg gttccccgag cgcgcccgcg atttccagct
     1861 cgagcctccc gagcgtccct gtgtgccgtt caagtccaag ccgctcggct tgcgcttcga
     1921 cgaaagcatg acgggctact actcaccggg cacgcaccgg ccgccgagcg acgaggaatt
     1981 tcgcgcgcgc gagcgccggg gccgtccaga gtacccgctg cgcgtcgatc tgcgcttgag
     2041 ctccgaaaac ctcgcgaaat tctgggacga cgagacgcac gccctccgcg ccacgggacg
     2101 catcacgctc gtcctgcccg gcgacaagga aaagcgcgag ctgccgctca gcgcggggcg
     2161 cgtcgagctc atggtgccgc gctacaagcc gcacggtgtg cccccgaacg agcacgagcg
     2221 gctcgtcgcg caagagtacg cgctgctcgg gcaagccgcg ttcgagcggc tgagcgcgac
     2281 ggagctcgcg gagctcggca cgcccgcgtt tcccggccgc cgccacaaga cgatcgccgg
     2341 ctccccgccg ccgcgcgccg aacgctttct caagtattgg ctgacgttca cgcacgacgg
     2401 caaatacttc ctcgtctacg gctacaagcg cgtgaaggac gaccccgcct tcgacgcttg
     2461 gcgcgacacg tcgtcgctct acatttcgct ctatcaaacc caaaaggatc ccgatctctc
     2521 gagcgtgccg agctcagggc tgctcggcgc gggcgtcatc cacgtggaca tgaacgagtt
     2581 catgttcaag cagttgccgt cgatgttcgt cgccgaaggc atcgatccgg agcgacgcgc
     2641 gcccggtgtg ccgtccacag acgatccggg cgcggtcgac ccggcgcgcg cgacctgggc
     2701 catcgcgaaa ttcggctggt ttttcttcgg ttccctccag cgcgtctacg cgcccgagtt
     2761 cggcaaagtc ttcgagacgt tcttccgctt gtcggagggg agccgcccgc aatgacgccg
     2821 agcgaaacga ttccgctcac cgtcgacgag gagcacggag gtctcaccct cacgttacgg
     2881 cgcttcaaac ccgcgaacgg cacgacgccg cgcggcgccg tcttgctcct gcacggcggc
     2941 aacagcgcgg gcgacacatt tctgctgccg aacggcgg
//
LOCUS       DATIML010000500         2747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1256840, whole genome shotgun sequence.
ACCESSION   DATIML010000500 DATIML010000000
VERSION     DATIML010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256840"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1837)
                     /gene="aspS"
                     /locus_tag="VLJ38_08715"
     CDS             complement(<1..1837)
                     /gene="aspS"
                     /locus_tag="VLJ38_08715"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HSU39637.1"
                     /translation="MSRFIDELKRTHDCGALRATDLGAEVVLFGWVANRRDHGSLIFI
                     DLRDREGMTQIVFDPDSSGPAHDLAEQFRGEWVIGVRGRVRSRGEQFSKKEGKMVSAA
                     NPALATGEIEVEVLEATIFNKAETPPFAIEDKSDTREEVRLEYRYLDLRRAPLQKALR
                     MRHRANHAARSYLSDQGCLELETPFLVKYTPGGARNFLVPARLHPGKFYALAESPQLF
                     KQLFMVAGYDRYFQLVRCFRDEDLRLDRQPEFTQIDIELSFVNQDDVFNLVEGLVFAI
                     WKAALGIDLKELYPDGHFPRLQFDTAMRDYGNDKPDVRFDLKHVDLTELVIEHDGGGI
                     PFFAAIAEKFKSGAYRRDLPAEIVKALVVPASAQFSRADGDKLEQLAKSMGAAGLARA
                     KVGPDGTWTQSPLAKSVTPEACRAINAATGAKDGDLILFQFGKTSLVHTVMANLRVAV
                     AKKLGLIPEVGHGNQWKFLWVVDPPLFEYDDDSKRWTAAHHAFTRPHDAHVELIEKDP
                     GKVLCYRYDLVLNGFEIAGGSIRLHDPEVQRRVFAALGIGEAEAQEKFGFLLSALRYG
                     APPHGGIALGMDRVSMLLAGTDSIRDVIAFPKTQKGTDLMSDAPSP"
     gene            1976..>2747
                     /locus_tag="VLJ38_08720"
     CDS             1976..>2747
                     /locus_tag="VLJ38_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39638.1"
                     /translation="MRHPAIESPRAFERACGWLAFAIPLVTTIARAETSGDFRGDLPL
                     VTGLGFLPLGMEGWLGIVAAQAASLIPLGGRTERVAWIGSVAAALASRLLFELARRAL
                     GAGERPPLASALALAAALTAVLSPAFQLEATSPGGAALAATAALLAFNVADAAPARDV
                     RASFLGGVLASLTFAESHTAGLSLVVALAVRAALRRTLPAGRAAGAWVLGAALPEALF
                     ALALVVRASSPHAWLDLGLGLGQSSLAARDVSTERVTAY"
BASE COUNT          391 a          913 c          962 g          481 t
ORIGIN      
        1 ccggactcgg ggcgtcgctc atcaggtcgg tacctttttg cgtcttcgga aacgcgatca
       61 cgtcacgaat gctgtcggtg cccgcgagca acatcgacac gcgatccatg cccagcgcaa
      121 ttcctccgtg cggtggcgcg ccgtaacgga gcgcggatag caaaaatccg aacttttcct
      181 gggcttccgc ctcgccgatg ccgagcgccg cgaagacgcg ccgctggacc tcggggtcgt
      241 gcagacggat cgagccgccc gcgatctcga agccgttcag cacgaggtcg tagcggtaac
      301 acagcacttt gcccggatct ttttcgatga gctcgacgtg cgcgtcgtgc ggacgggtga
      361 aggcgtggtg cgcggccgtc cagcgcttcg agtcgtcgtc gtactcgaag agcggcggat
      421 cgacgaccca gaggaacttc cactgattgc cgtggccgac ttccggaatg agaccgagct
      481 tcttggcgac cgcgacgcgc agattggcca tcaccgtgtg cacgagcgaa gtcttgccga
      541 actggaagag aatcaggtcg ccgtccttcg cgcccgtggc ggcgttgatc gcgcggcaag
      601 cttcgggcgt gacgctcttg gcgagcgggg attgcgtcca ggtgccgtcg gggcccacct
      661 tggctcgagc gagtccggcg gcgcccatgc tcttggcgag ctgctcgagc ttgtcgccgt
      721 cggcgcgcga gaactgcgcc gaagcgggca cgacgagcgc cttcacgatc tcggccggca
      781 aatcgcggcg atacgcgccg ctcttgaact tctcggcgat ggcggcaaaa aacggaatgc
      841 cgccgccgtc gtgctcgatc acgagctcgg tgagatcgac gtgcttgagg tcgaagcgaa
      901 catcgggctt gtcgttgccg tagtcgcgca tcgccgtgtc gaactggagg cgcgggaagt
      961 ggccgtccgg atagagctcc ttcaaatcga tgccgagcgc ggccttccaa atcgcgaaca
     1021 ccaggccttc gacgagattg aacacgtcgt cctggttcac gaagctgagc tcgatgtcga
     1081 tctgggtgaa ctcgggctga cgatccaggc gcaggtcctc gtcacggaag cagcgcacga
     1141 gctggaaata gcggtcgtaa cccgccacca tgaagagctg cttgaagagc tgcgggctct
     1201 cggccagcgc gtagaacttg ccggggtgca ggcgcgccgg cacgaggaag ttgcgggcgc
     1261 cgcccggcgt gtacttcacg agaaagggcg tttcgagctc gaggcagccc tgatcggaga
     1321 ggtagctccg cgcggcgtgg ttggcgcgat ggcgcatgcg cagcgccttc tgcagcggcg
     1381 cgcggcgcag atccaagtag cggtactcga gccgcacctc ttcgcgcgtg tcgctcttgt
     1441 cctcgatcgc gaacggcggc gtctccgcct tgttgaagat cgtggcttcg agcacctcga
     1501 cctcgatctc gcccgtagcg agcgccgggt tggcggcgct gaccattttc ccttccttct
     1561 tgctgaactg ctcgccgcgc gagcgcacac ggccgcgcac gccgatgacc cactcgcctc
     1621 ggaattgttc ggcgaggtcg tgcgccgggc cggagctgtc ggggtcgaac acgatttgcg
     1681 tcatgccctc gcggtcgcgc agatcgatga agatgagcga gccgtggtcg cggcggttcg
     1741 cgacccagcc gaagagcacg acctcggcgc cgaggtcggt agcgcgcagc gctccacaat
     1801 catgggttcg cttgagctcg tcgatgaagc gggacatggt tttcggccgt cgtttacgct
     1861 gggggacgcg gagggtcgag gcttttagca tcggcccgcg ctgccggccg gagcgtgtcc
     1921 ggcaaatctg ccgaaaagtg ggcccaaagc gcccgtcggt cttagccatc ccagggtgcg
     1981 acacccggcg atcgaatctc cccgcgcttt cgagcgtgcg tgcggctggc ttgcgttcgc
     2041 gatcccgctc gtcacgacga tcgcgcgcgc cgagacgagc ggcgacttcc gcggtgacct
     2101 gccgctcgtc accggactcg gcttcctgcc gctcggcatg gaaggctggc tcggcatcgt
     2161 cgcggcgcag gccgcgagcc tgatcccgct cggcgggcgc accgaacgcg tcgcctggat
     2221 cggcagcgtg gcggccgcgc tcgcttcgcg cctcttgttc gagctcgccc gacgcgcgct
     2281 cggcgcgggc gaacggccgc cgctcgcttc ggcgctcgcg ctggcggctg cgctcacggc
     2341 cgtgctttcg cctgcgtttc agctcgaggc cacgtcgccc ggcggggcgg cgctcgcggc
     2401 aacggcggcg ctcctcgcgt tcaacgtcgc cgacgcggcg ccggcccgtg acgtgcgcgc
     2461 gagctttttg ggtggggtac tcgcgtcgct cacctttgcc gagtcgcaca cggcggggct
     2521 ctcgctcgtg gtggcgcttg ccgtgcgcgc cgcgctgcgg cgcaccttgc cggcagggcg
     2581 cgcggcgggg gcttgggtcc tcggcgcggc gctgcccgag gcgctgttcg cgctcgcgct
     2641 cgtcgtgcgc gcgagctcgc cgcacgcctg gctcgatctc gggctcggcc tcggtcaatc
     2701 gagcctcgcg gcgcgcgacg tctcgaccga gcgcgtgacg gcgtacg
//
LOCUS       DATIML010000501         3282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1833867, whole genome shotgun sequence.
ACCESSION   DATIML010000501 DATIML010000000
VERSION     DATIML010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1833867"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(473..1792)
                     /locus_tag="VLJ38_08725"
     CDS             complement(473..1792)
                     /locus_tag="VLJ38_08725"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HSU39639.1"
                     /translation="MNNRTCIIGAGSSGMVAVKALLDTGVPFDCFEESNCVGGLWVFG
                     NKNGRSAAYRSLSINTSRERMQYADFPMPASYPDYPGHAQIAEYFQAYAEHFGLLPHI
                     RFETRVERVEPSAAGYLVTTSNGVTDRYDAVIVANGHHWLPHFPEPPFPGVFAGTTLH
                     SSAYVSPTEPYDLRERSVVVLGFGNSAVDIACELARPGGAQRVFLATRRGAWVLPKYV
                     LGRPVDRLRVAPSFLPASIAARLSEFFYPRVIGDLAAHGLPKPDHRLGGAHPTISSDL
                     LPFVKAGLVQPKPNIRAFHGGELEFVDGTREAVDALVYATGYQVSFPFFDPAFVSAPG
                     NELSLYFRTLHPEQKHLYFIGLAQPLGAIMPIAEAQAKLVAASLSGRYLPPPSETMRR
                     AAEAERAEVARRYVHSRRHTMQVDFDEFMRALAKEHAAGARRARSSA"
     gene            2124..2543
                     /locus_tag="VLJ38_08730"
     CDS             2124..2543
                     /locus_tag="VLJ38_08730"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39640.1"
                     /translation="MRKILVVEDSASTRAFVRSTLESAQGVPDVEVSEATSGFDALRL
                     LPRGPYALVITDINMPDINGLELVQFMRKSELHRSTPILLISTQSSERDRQRGLRLGA
                     SGYLAKPFGGKALIDEVERHLGSAGAAPTPAGESGRG"
     gene            2536..>3282
                     /locus_tag="VLJ38_08735"
     CDS             2536..>3282
                     /locus_tag="VLJ38_08735"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSU39641.1"
                     /translation="MADPTEKARDEFLSEAQEIVETLSRNLLDLDASARSGAIDPALI
                     NEAFRAVHTLKGLAGLFGAQRLGQMSHRLEDLLDDLRLGRMTLGPDVLDTLFAAVDVY
                     GRLLAQEREGKDDPSPAADELLARLEKLGSEAPSRAAPATEYDLDPSLLAVLTEYEEH
                     RLRANLEQKMRLYRLRVEFDLTTIDKALEDMKARAKRHGEIITYLPAGEATSADAIEL
                     DLLMASRDDLATLIGALGADNVVIEEIPRKR"
BASE COUNT          536 a         1094 c         1146 g          506 t
ORIGIN      
        1 ggggcgggcg gtaacatcga ctgacatcgc cgcggtatcg agcccttagc cccgctgccg
       61 agcaccacgc cgccgcgggc gctgaagtca gcgcgcggtc ttcgcggcgt ggtgcggaat
      121 agcgttaccc ggcgacggcg atcggccgct cggggtgtgc tcgccggccg atttccgctc
      181 agctcatcgc gcgtctgttc acggcgccgg catctcctgc acttccgcgc gccgccgccc
      241 cgggcacgtc tttcgtgcgc cgccccgagg ccgccccgag tcgccgcgcc cccgcgcccg
      301 cgaagcgggc gcttgtcggg cgcctgcgcg cggaggccga aggccgagca cgcaggacgt
      361 gcagcgacgc acccgggcgg gggcagctca ttccccgcac accgagctcg gtgcgctgtt
      421 tcatcgcgtc agcggcacac tcgtgcggct ggtcgagccg caacgcagcg tgctaggcgc
      481 tcgagcgggc tcgccgtgcc ccggccgcgt gttccttggc gagcgcgcgc atgaattcgt
      541 cgaaatccac ctgcatcgtg tggcggcgcg aatgcacgta acggcgcgcg acctccgcgc
      601 gttcggcctc ggcggcgcgg cgcatcgtct cgctcggcgg cggcaggtag cgccccgaaa
      661 ggcttgcggc cacgagcttc gcctgcgctt cggcgatggg catgatcgcg ccgagcggtt
      721 gcgcgagccc gatgaagtac aagtgctttt gctcgggatg cagcgtacga aagtagagcg
      781 acagctcgtt gcccggcgcc gagacgaaag cgggatcgaa gaacggaaac gacacctgat
      841 agcccgtcgc gtacacgagg gcgtccaccg cttcacgtgt gccgtcgacg aattcgagct
      901 cgccgccgtg gaacgcacgg atgttcggct tcggctgcac caggcccgct ttgacgaacg
      961 gcaaaagatc gctcgaaatc gtcggatgcg cgccgcccaa gcgatggtcg ggcttgggca
     1021 agccgtgcgc cgccagatcg ccgatcacgc gtggataaaa gaactccgag aggcgcgccg
     1081 cgatgctcgc gggcagaaag ctcggcgcga cgcgcagccg atcgacgggg cggccgagca
     1141 cgtatttcgg caagacccac gcgccgcgcc gcgtcgccaa aaacacgcgc tgagcgccgc
     1201 ccggtcgcgc gagctcgcac gcgatatcga cggcgctgtt cccgaagccc aagaccacga
     1261 cgctccgttc gcgcagatcg tacggctccg tcggcgagac gtaggccgag gaatgcagcg
     1321 tcgtgcccgc gaacacgccc gggaacggcg gttcgggaaa atgcggcagc cagtggtgcc
     1381 cgttcgcgac gatgacggcg tcgtagcggt ccgtcacgcc gttcgaggtc gtgacgaggt
     1441 agcccgccgc gctcggctcg acgcgttcga cgcgtgtctc gaagcggatg tggggcaaga
     1501 gtccgaaatg ctcggcgtag gcctggaagt actcggcgat ctgcgcgtgc ccggggtaat
     1561 ccgggtagct cgccggcatc gggaagtcgg cgtactgcat gcgctcgcgc gacgtgttga
     1621 tgctgagcga gcgatacgcc gcgctccggc cgttcttgtt gccgaacacc cagagtccgc
     1681 cgacgcagtt gctctcctcg aagcaatcga agggtacgcc cgtgtcgagg agcgccttga
     1741 cggcgaccat gccggaagag ccggcgccga tgatgcaggt cctgttgttc acgtggaaga
     1801 gcgcgcaggc cgcgtgcgag cgcaaatctc ctcgcccgtt tcgagatgtc aatcgccggt
     1861 tgtcgcgcgg gcgccgtggc gacgtgagag aaggcgcgcc tcgcggcctc gtggccggag
     1921 cgcggactca gcccgatgag gggcccagct ggacacgcat gtcggccctg gacgcgctgg
     1981 agtgcttgtc ggctgatgtg cgagaaaatc gttctgcttc cccgctcagg aaaggcgctc
     2041 tattctgagt ttggtcgaga gatattcggg cggttgatcg aagagtcgag actaggcttg
     2101 ggagcacggc gaggacggat ctgatgcgga aaatcctcgt ggtcgaggac tcggcgagca
     2161 ctcgagcgtt cgtgcgcagc acgctcgagt cggcgcaggg cgtgcctgac gtggaggtgt
     2221 ccgaggcgac gagcggcttc gacgcgctcc gtctgctccc gcgcgggccc tacgctctgg
     2281 tcatcaccga catcaacatg cccgacatca acgggctcga gctcgttcag ttcatgcgca
     2341 agagcgagct gcaccgctcg actccgatct tgctcatctc gacgcagtcc tccgagcgcg
     2401 atcggcagcg cggcctgcgc ctcggcgcga gcggctattt ggcgaaaccc ttcggcggca
     2461 aggcgctgat cgacgaggtc gagcgccatc tcggctccgc gggcgccgca ccgacgccgg
     2521 cgggggagag cggtcgtggc tgatcccacg gagaaggcgc gcgacgagtt tctctcggaa
     2581 gcgcaggaga tcgtcgagac gctctcgcgc aatctgctcg atctcgacgc gtccgcgcgc
     2641 tcgggcgcca tcgatccggc gctcatcaac gaggcctttc gcgccgttca cacgctcaaa
     2701 ggactcgcgg ggctcttcgg cgcgcaacgg ctcggccaga tgtcgcatcg gctcgaggat
     2761 ctgctcgacg atttgcggct cgggcgcatg acgctcggcc cggacgtgct cgacacgctg
     2821 ttcgccgccg tcgacgtgta cggccgcttg ctcgcgcagg aacgtgaagg caaggacgac
     2881 ccgagccccg cggcggacga gctcttggct cggctcgaaa agctcggctc ggaagcgccg
     2941 agccgcgccg cgcccgcgac ggaatacgat ctcgacccga gcctgctcgc ggtgctcacc
     3001 gagtacgaag agcatcggct gcgcgcgaac ctcgagcaga agatgcggct ctatcggctg
     3061 cgcgtcgagt tcgatctcac gacgatcgac aaggcgctcg aggacatgaa ggcgcgcgcc
     3121 aagcgccacg gggaaatcat cacgtacttg ccggcgggcg aagcgacgag cgccgacgcg
     3181 atcgagctcg atttgctgat ggcgtcgcgc gacgatctcg cgacgctcat cggcgcgctc
     3241 ggcgccgaca acgtcgtgat cgaagagatc ccgcgcaagc gc
//
LOCUS       DATIML010000502         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2119077, whole genome shotgun sequence.
ACCESSION   DATIML010000502 DATIML010000000
VERSION     DATIML010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119077"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..751)
                     /locus_tag="VLJ38_08740"
     CDS             complement(44..751)
                     /locus_tag="VLJ38_08740"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSU39642.1"
                     /translation="MATPSEGPSDREHLLSRFGRSIKAGTVLFRDGEPADFAYLLQVG
                     RVRLFKQVGAMERSLSVARPGDLFGESALIPGATRRSTAVALDDSTAIAVDHATFENV
                     LAMHPGVGSSVLQQLLSRLRDAEDQIEILMMRDHQSKVVVALTKLVQREIAQSGGNGA
                     EVSLQVSPLELAAKVGLDVDIVKRVVSQLREGGYVRIHDERVEVTDIETMKELYSLLS
                     LKDQLRGSPERERGRTA"
     gene            complement(850..>1619)
                     /gene="tsaB"
                     /locus_tag="VLJ38_08745"
     CDS             complement(850..>1619)
                     /gene="tsaB"
                     /locus_tag="VLJ38_08745"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HSU39643.1"
                     /translation="RRAPLSLAIPESARKSKRGRMVDIAPSRYHHRPVRVLGIETSTR
                     RGSVALAVDGKVVSVQTHEEPNSHAERVLGLVERALAEAKLDRKALDRLAVGVGPGSF
                     TGLRVGIALAEGIALGLERPLVGVGSLRAMAQAVPATDERARIAVLDARRGEVFMAAY
                     APDGEELIAPSALAPAAARELLLATLGARSAVTVGESASLLGEGFSHLAGTELDLPHA
                     GSVALLGALLEPAIARAEPVYVRGAGATLPNLPPSPL"
BASE COUNT          259 a          538 c          570 g          252 t
ORIGIN      
        1 aggaaccaga accaagcgcc ccgcgcgaac aagctttgca tcctcacgcg gtccggcctc
       61 gctcgcgctc gggactgccg cgcagctgat ccttcaaact caggagcgag tagagctcct
      121 tcatcgtctc gatgtcggtg acctccaccc gttcgtcgtg gatgcggacg taaccgcctt
      181 ctcggagctg ggacacgacg cgtttgacga tgtcgacgtc gaggccgacc ttggccgcga
      241 gctcgagcgg ggaaacctgg aggctgacct cggcgccgtt gccgccgctc tgcgctatct
      301 cgcgctgcac gagcttggtg agcgccacca cgactttcga ttggtggtcg cgcatcatga
      361 ggatctcgat ctgatcctcg gcgtctcgga gccgactcag gagttgctga agcacgctcg
      421 agccgacgcc cgggtgcatc gcgagcacgt tttcgaaggt ggcgtggtcc acggcgatcg
      481 cggtcgagtc gtcgagcgcg acggcggtcg aacggcgggt cgctccgggg atcagcgctg
      541 actcgccgaa caagtcgccc gggcgtgcga cgctgaggct ccgttccatc gcgccgactt
      601 gcttgaagag ccgcacgcgg ccgacctgca gcaagtacgc gaaatcggcc ggttcgccgt
      661 cgcggaacag caccgtaccc gccttgatgg aacgcccgaa tcgggagagc aggtgctcgc
      721 ggtcgctcgg accctcggaa ggcgtcgcca tcagccggga gatgctagtc gatcttggaa
      781 caggggtggg tcagtggtcg gcaagggacg cggaaaggca tgccagcgcg ccgtgctcaa
      841 accaaaagat cagagaggcg aggggggcag gtttggcagt gtcgcgcccg ctccgcgcac
      901 gtaaaccggt tccgcacgcg cgatggccgg ctcgagcaga gcgcccagca atgcgacgga
      961 tcccgcgtgc ggtaagtcga gctccgtgcc ggcgaggtgc gaaaaccctt cgccgagtag
     1021 gctcgcgctt tcgccgacgg tgacggcgct gcgcgcgccg agcgtcgcga gcaggagctc
     1081 acgcgcggcg gccggtgcga gcgcgctcgg tgcgatgagc tcctcgccgt ccggcgcgta
     1141 ggccgccatg aacacctcgc cgcgccgcgc gtcgagcacg gcgatgcgcg cccgctcgtc
     1201 cgttgcgggt acggcttgcg ccatggcgcg cagcgatccc acgccgacca atggccgctc
     1261 gagcccgagc gcgatgcctt cggcgagcgc gatgccgacg cgcagtcccg tgaacgagcc
     1321 gggccccacg ccgaccgcga ggcgatcgag cgccttacgg tcgagcttgg cttcagcgag
     1381 cgctcgttcg acgaggccga gcacgcgttc ggcgtgagag ttcggttcct cgtgcgtttg
     1441 cacgctgacg accttgccgt ccacggcgag cgcgaccgag ccgcgccgcg tggatgtttc
     1501 gatgccgaga actcgcacgg gccgatggtg atatcgtgaa ggggcgatgt ccaccatcct
     1561 gccgcgcttc gactttcgag ccgactcggg gatggcgagc gacaagggcg cgcggcgcg
//
LOCUS       DATIML010000503         2830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5010348, whole genome shotgun sequence.
ACCESSION   DATIML010000503 DATIML010000000
VERSION     DATIML010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5010348"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(263..1258)
                     /locus_tag="VLJ38_08750"
     CDS             complement(263..1258)
                     /locus_tag="VLJ38_08750"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU39644.1"
                     /translation="MDAAPATARSSEVRFQSAPLFRVEGGPELPDGAAEWFVASSGRR
                     LRVALFAPAGAARGSAIVSAGRTEPIEKYGEVARELVARGFVTLVHDWAGQGLSSRFG
                     EDRFTCDIVGGAEALVADFCDIVAGYAERLPGPWLALAHSMGAALTALALTDGDTRFA
                     GAALCAPMVEFSVGKLPFWFVRLVVEGAARAAETRLARRGVAPAELAFERNVLTHDRA
                     RYERTRALYRAEPELQLGEPTWRWLRFAVELRALLLAPGAPERIRCPLVAVAAGDDRI
                     VSSAAIRSFVARVPRGRYLEIPGAFHEILVETDERRALFWRAFDELADEALATAR"
     gene            1340..1687
                     /locus_tag="VLJ38_08755"
     CDS             1340..1687
                     /locus_tag="VLJ38_08755"
                     /inference="COORDINATES: protein motif:HMM:NF014019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HSU39645.1"
                     /translation="MAIVHRIPILTTFDAPPGYVIQRVMGPCWGITVRSRSVIGTACA
                     GCQQIFGGEISALTELATESRNVSMQRLEQHAIDLGANAVLGMRFDSGELMQNTNEIV
                     AYGTAVILAPVHH"
     gene            1704..2303
                     /locus_tag="VLJ38_08760"
     CDS             1704..2303
                     /locus_tag="VLJ38_08760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39646.1"
                     /translation="MSAAPLTALAEAARFAPPRLGRDTARAIDRLARRAHAFHRFAHH
                     PLCDRYASELIRLGRRQRVCRGCVALGVGLLAGFALALSAQPSGRAVYGLLAFGAVFG
                     AASLRLRLPKLLGRFVPALGFGLALASVFTELRSYAWLAGACGFGGAFFAYRARGPSR
                     TPCASCPERLGPAPCSGFARIVRRERAFQRAARKLIDAA"
     gene            2392..>2830
                     /locus_tag="VLJ38_08765"
     CDS             2392..>2830
                     /locus_tag="VLJ38_08765"
                     /inference="COORDINATES: protein motif:HMM:NF025268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSU39647.1"
                     /translation="MTAGAAGTPPTPVAGSGELEWYRDDPDGALARARREHKLVVVDL
                     WAAWCHTCLSMRQFVLTGSNLPGANARYVFLAIDTELEQNAEFLRRFPTSGWPTFYVL
                     SPDGPSVCGRWLGAASPGQFARFLADAERARPIALRASAGAEAA"
BASE COUNT          403 a          992 c          971 g          464 t
ORIGIN      
        1 gacggcgcct cgaaagccgg cgtccacacg atactgagtc tcgttcacct ccacctccgc
       61 gatgggggcg aagtcgtagt cgaccttgga ttcagcaatt tcactggatg gtgttgccat
      121 ggctgagctt ttgttcagta tcagctcccg accaaagcgc cagcaaaaag agccaatcga
      181 ccaaacaacg tcctaggtca ggagcgcgcc aggttcgact ggagagcgcg tccgagcccg
      241 ctgagctctg cgacgcggct cgtcagcgcg cggtcgcgag cgcttcgtcc gcgagctcgt
      301 cgaacgcacg ccagaagagc gcgcgccgct cgtcggtctc caccaaaatc tcgtggaatg
      361 cccccgggat ttcaaggtag cggccgcgtg gcacgcgcgc cacgaagcta cgaatcgccg
      421 cgctgctcac gatgcgatcg tctcccgccg cgacggcgac gagcggacac cgaatgcgct
      481 cgggcgctcc gggcgcgagc agtagggccc gaagctcgac tgcgaagcgg agccagcgcc
      541 acgtgggctc gccgagttgg agttcgggtt cggcgcggta gagagcccgg gtgcgctcgt
      601 agcgcgcccg atcgtgcgtg agcacgttgc gctcgaaggc gagctcggct ggggcaacac
      661 cgcggcgggc gagccgtgtc tccgcggcgc gcgccgcgcc ttcgaccacg agccgcacga
      721 accagaacgg cagctttccc accgagaact cgaccatggg cgcgcacaac gcggcgcccg
      781 cgaagcgcgt gtccccgtcc gtcaacgcga gcgccgtgag cgccgcgccc atcgaatgcg
      841 ccagcgcgag ccacggcccc ggcagccgct ctgcgtagcc cgcgacgatg tcgcaaaagt
      901 ctgcgaccaa cgcctccgcg ccgccgacga tgtcgcacgt gaaccggtcc tcaccgaagc
      961 gcgacgagag tccctgcccg gcccagtcgt gcacgagcgt gacgaagccg cgtgcgacga
     1021 gctcacgcgc gacctcaccg tatttctcga tcggttcggt acgcccagcg ctcacgatgg
     1081 ccgagccacg cgcggcgccg gcaggcgcaa agagcgcaac gcgaaggcgc cggccggagc
     1141 tcgcgacgaa ccattcggcc gcgccgtccg ggagctccgg tccgccctcg acgcggaaga
     1201 gcggcgcgga ttggaatcgg acctcgctcg agcgcgcggt cgcgggggct gcgtccatgc
     1261 ccctttttag gctgattgcc gggccagggc cagccccgga cgcgccagca cgggtcggtc
     1321 ggtgttatct tccgccgcca tggcgatcgt tcaccgcatc ccgatcctca cgaccttcga
     1381 tgcgccgccc gggtacgtga ttcaacgcgt gatggggccg tgttggggca tcaccgtgcg
     1441 gtcgcggagc gtcatcggta cggcctgcgc tggctgtcag cagatcttcg gcggcgaaat
     1501 cagcgccctc acggagcttg ccaccgagtc ccgcaacgtc tccatgcagc gactcgaaca
     1561 acacgcgatc gacttgggcg cgaacgccgt gctcggcatg cgcttcgact cgggtgagct
     1621 catgcaaaat acgaacgaaa tcgtcgccta cgggacggcc gttatcctcg cgcccgtcca
     1681 ccactgacgc cgaccgcgcc gccatgtccg ccgcgccgct caccgcgctc gccgaggccg
     1741 ctcgcttcgc gccgccacgg ctcgggcgtg acacggcgcg cgccatcgat cggctcgcgc
     1801 ggcgcgcgca tgcgtttcat cgcttcgcgc accacccact gtgcgatcgc tacgcgagcg
     1861 agctcattcg cctcggtcgc cgtcagcgcg tgtgccgggg ctgcgtcgcg ctcggcgtgg
     1921 gacttctggc aggcttcgcg ctcgcgttgt ccgcccagcc gagcgggcgc gccgtttacg
     1981 gtttgcttgc gttcggcgcc gtgttcggag ccgcgtcgct ccgcttgcgc ttgcccaagc
     2041 tgctcggtcg tttcgtgccg gcgctcgggt tcggcctggc tctcgcttcc gtgttcaccg
     2101 agctccggag ctatgcgtgg ctcgccggcg cgtgcggctt cgggggcgcg ttcttcgcgt
     2161 accgcgcgcg cggcccgagc cggacgccgt gcgcgagttg tccggagcgg ctcgggccgg
     2221 ctccgtgcag tggttttgct cgcatcgtgc ggcgcgagcg agcgttccag cgcgccgcgc
     2281 ggaagctcat cgatgccgct taggcgtgcg agcgtgtgct tcatgcttgc gctttcgtgt
     2341 gcggcgtcgc gcgtgaagac ggggtcgctt gcggggacga ccacgagtgc gatgacagct
     2401 ggcgcggcgg gtacaccgcc gacgccggtc gcggggagcg gcgagctcga gtggtatcgg
     2461 gacgatccgg acggcgcgtt ggcgcgtgcg cggcgtgaac acaagctcgt cgtcgtcgat
     2521 ctatgggcgg cgtggtgcca cacgtgtttg tcgatgcggc agttcgtgct cacgggctcg
     2581 aacttgcccg gcgcgaacgc tcgttatgtc tttctcgcga tcgacaccga gctcgagcag
     2641 aacgccgaat ttctgcgacg ctttccgacc tcgggctggc cgacgttcta cgtgctttca
     2701 cccgacggtc cgagcgtgtg cggccgctgg ctcggcgcgg catcacccgg acagttcgcg
     2761 cgttttctcg ccgacgccga gcgagctcgg ccgatcgctt tgcgagcgtc ggcgggggcc
     2821 gaagccgctc
//
LOCUS       DATIML010000504         4366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4722715, whole genome shotgun sequence.
ACCESSION   DATIML010000504 DATIML010000000
VERSION     DATIML010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4366
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4722715"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="VLJ38_08770"
     CDS             complement(<1..991)
                     /locus_tag="VLJ38_08770"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU39648.1"
                     /translation="MENQLTPASESKPAKGFAPVIDEARLLEFVHKVVGEIGASMSAA
                     LVVMGDKLGLYRTLAESGPLTSSELARLTGTAERYIREWLANQAAGGFLTYDAATQKF
                     TLPPEQAYCLANEASPFNLQGAFALVEAAFHAQERGVENFRTGGGLEWGHQHPCLFSG
                     TERFFRAAYIGNLVSSWLPALTGVKAKLERGARVADVGCGFGASTLLMAQAFPNSTFV
                     GFDYHEGSVKAARERAVKAGLAERVRFETARSTDFSGDSYDLVCTFDCLHDMEDPAGA
                     ARHIAKKLTKAGSWMIVEPLAGDRVEQNLNPVSRVYYAASTLICVPHSLSAQGP"
     gene            1167..4184
                     /locus_tag="VLJ38_08775"
     CDS             1167..4184
                     /locus_tag="VLJ38_08775"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU39649.1"
                     /translation="MKTLGIRLLGELDLGEGTQRLPPSRRTRALLAYLAVERRAHSRQ
                     RLCDLFWGGPNDPRAALRWSLSKLRAVLPLETSGEHVQLGAEVASDVAFVQEALARGA
                     ASLATAELVDVARLFRGEPLEGLDIRDCFQFQEWLLATREHLRACEISVLQELVKRLR
                     ESDPAAALAYARKRVAIDPLLEAGHVTVLELLGAAGRMKEAVAHFERCKRMLTSELGA
                     QPWPALERARAALRPSGGPERASAPLLEQTPRAQVTATCIGRAAELAALSHVFVHGGV
                     ALVLGEPGIGKSRLLEATSEQARASGAIVLRGRAFEAEMIRPYGAVIDALRSIPLRGL
                     VSEGAASLGPLLPELAKSTSEQRLDRERLFDGVLDFVRALARSGARVALLLDDVQWLD
                     DASAALVHFLARAGEPALTLALGARDGELEDNAPVLRVVRSLRKGKSLHEIRLGPLSL
                     EETTLLVADFGGSVDARLVHDAADGNPLFTLELAAAVASGLAPDELPHTLLGLLSERL
                     ERLDEHGRALVPWAATLGHSFALATLGAVSGTAPEELLRGIEELERRGVLKVAPAGSS
                     QFGYDFVHDLVRRAAYQALSVPRRRLCHARAAEILWRDVERDASLASDVAHHAALAGE
                     HAVAARACAEAGAHCLRVFAYAEALELARQGRRHAAELPAAERRALEIPLLSLLVHAD
                     TPARHDELDATLFATLSEAQADGDRRGVATAAKALALLRYFRGDLPGAGEVSVRVADA
                     VRSADDPHEVANELAQSARCLTLVGRVEESRELLGEALEVGRKNGVAPIELAFAQATL
                     AHFDGELERAEELFRATLAAARRFEDHWRGSEALARLVMIALERDDLDAAAGLALELA
                     VLAERIDRDGAELFFAKALSALVEVRTSVRGGSRPETAPLLHAIERLRAIDTKAFLVF
                     SLNALAEVELGARLPDAAETHATEAAALARRIKNRSELAVATSLVARSWRLRGDEPRA
                     RAVIAEATAELTSDEEISSRARRHLAQAKKLTA"
     gene            4181..>4366
                     /locus_tag="VLJ38_08780"
     CDS             4181..>4366
                     /locus_tag="VLJ38_08780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39650.1"
                     /translation="MTTAAVIVVEYTLTPDVPETPERLAHLKRCLAVREVTLLRSYSS
                     LDGAKLVRVFEAPDAGAV"
BASE COUNT          640 a         1474 c         1516 g          736 t
ORIGIN      
        1 cagggccctg tgccgacaaa gaatgcggca cgcagatcaa cgtggatgcc gcgtaataca
       61 cgcgcgacac gggattcagg ttttgctcga cgcggtcgcc ggcgagcggc tcgacgatca
      121 tccagctgcc tgccttggtg agtttcttgg cgatgtggcg ggccgcaccc gctggatcct
      181 ccatgtcgtg caggcagtcg aacgtgcaca cgagatcgta gctgtcgccg gaaaaatccg
      241 tcgagcgtgc cgtctcgaag cgcacgcgtt ccgcaagccc agccttgacg gccctttcac
      301 gcgccgcttt gacggaacct tcgtggtagt cgaagccgac gaaggtcgag ttcgggaaag
      361 cctgcgccat caagagcgtc gacgcgccga aaccacaacc cacgtccgcg acgcgcgcgc
      421 cgcgctcgag cttggctttc acgcccgtca gcgccggcag ccacgagctc accaaattgc
      481 cgatgtacgc agcgcgaaag aaccgctccg tgccggaaaa caggcaggga tgttggtggc
      541 cccattcgag gccgccgccg gtgcgaaagt tttcgacgcc gcgctcttgt gcgtggaaag
      601 cggcttcgac gagtgcaaag gcgccctgca ggttgaaggg gctcgcctcg ttcgccaggc
      661 aataggcctg ttcgggcggc agcgtgaact tttgcgtggc ggcgtcgtac gtgagaaagc
      721 cgcccgcagc ctggttggcg agccactcgc gaatgtaacg ctccgcggtt cccgtcaggc
      781 gggcaagctc gctggaagtg aggggcccgc tttcggcgag cgtgcgatac aagccgagct
      841 tgtcgcccat gacgacgagc gccgcgctca tcgaagcgcc gatttcaccg acgactttgt
      901 gcacgaactc gagcagccgc gcctcgtcga tgacgggcgc gaaacctttg gcgggtttgg
      961 actcggaagc gggcgtgagc tggttttcca tgagatatcc cttctgctgc gtggttcagc
     1021 gcgtcccgag ggacggtcgc tgtaggcgaa acctcgctga cccgcgttga aggccgcgtt
     1081 ggagccggcg ttgtttttgc tgtggaggcg tctttcggcg ggccgagggc catgcgatag
     1141 tgcgcgggca cgagccgcgt ttgcgcatga aaacgcttgg tattcgccta cttggcgagc
     1201 tcgatctcgg tgagggcacg cagcggctgc cgccgtcccg tcgcacgcgc gcgctgctcg
     1261 cgtacttggc ggtggagcga cgcgcccatt cacggcagcg tttgtgcgat ctgttttggg
     1321 gcggcccgaa cgatccgcgt gcggcgctgc gctggagtct gtcgaagctg cgggccgtgc
     1381 tccccctcga gaccagcggc gaacacgtgc agctcggcgc cgaggtcgcg agcgacgttg
     1441 cgttcgtaca agaggcgctt gcgcgaggcg cggcgagctt ggcgacggcc gagctcgtgg
     1501 acgtagcgcg actctttcgc ggtgagccgc tcgaaggact cgacatccgc gactgttttc
     1561 agtttcagga gtggctcctc gcgacgcgcg aacacctgcg cgcctgcgag atttccgtgt
     1621 tgcaagagct cgtcaagcgc ctgcgcgaga gcgaccccgc tgccgcgctc gcctacgcgc
     1681 gcaaacgcgt cgcgatcgat cccttgctgg aagcaggtca cgtcaccgtg ctcgagcttt
     1741 tgggagccgc tggacgaatg aaggaagccg tcgctcactt cgagcgttgc aaacggatgc
     1801 tcacgagcga gctcggcgcc cagccgtggc ccgcgctcga acgcgctcgt gcggccttgc
     1861 gcccgagcgg cggcccggaa cgagcctctg cgcccctgct cgagcaaacg ccgcgtgccc
     1921 aggtgacggc gacctgcatt gggcgcgccg cggagctcgc cgcgctctcc cacgtgttcg
     1981 ttcacggcgg cgtggcgctc gtgctcggcg agccgggcat cggcaaatcc cggttgctcg
     2041 aagctacgag cgagcaggcg cgagcgagcg gcgcgatcgt gctccgaggt cgcgcgttcg
     2101 aagccgaaat gattcggccc tacggtgccg tgatcgacgc gctgcgctcg attccgctgc
     2161 gggggctcgt cagcgagggc gcggcgtcgc tcgggccgct cttgcccgag ctcgccaagt
     2221 caacgagtga gcagcgactc gaccgggagc ggctcttcga cggcgtgctc gatttcgtgc
     2281 gggcgctcgc ccgctccggt gcgcgcgtgg cgctcctgct cgacgacgtt caatggctcg
     2341 atgacgcctc ggctgcgctc gtgcacttct tggcgcgcgc cggtgagccg gcgctgacgc
     2401 tcgcgctcgg cgctcgcgac ggcgagctcg aggacaatgc gcccgttctg cgcgtcgtcc
     2461 gctccctgcg caaagggaag agcctgcacg agattaggct tggtccactc tcgctcgagg
     2521 agacgactct gctcgtcgca gacttcggtg gcagcgtcga cgcgcggctc gtgcacgacg
     2581 ccgccgacgg taatccgctc ttcacgctcg agctcgccgc ggccgtcgcg agcgggctcg
     2641 cgccggacga gctcccccac accctgctcg gcctcttgtc ggagcgtctc gagcggctcg
     2701 acgaacatgg ccgcgcgctc gtgccctggg cggcaacgct cggccatagc ttcgcactcg
     2761 cgacgctcgg cgccgtttcc gggacagcgc ccgaggagct gctccgcggc atcgaagagc
     2821 tcgaacgccg cggcgtgctc aaagtcgcgc ccgccggttc cagccaattc ggctacgact
     2881 tcgtgcacga cctcgtccgg cgcgcggcgt atcaggctct atcggtgccg cgccggcgat
     2941 tgtgtcacgc gcgtgcggcg gagatcctgt ggcgcgacgt tgagcgcgac gcgtcgctgg
     3001 ccagcgacgt tgcgcaccat gccgcgctcg ccggcgagca tgccgtcgcg gcgcgtgcgt
     3061 gcgcggaagc cggagcccat tgtttgcgcg ttttcgccta tgccgaggcg ctcgagctcg
     3121 cacggcaggg ccgccgtcac gccgcggagc tgccggctgc cgaacgccgg gccctcgaaa
     3181 tcccactgct ttcgttgctg gtccacgccg acacacccgc gcggcacgac gagctcgacg
     3241 cgacgctgtt tgcgacgctt tccgaagcgc aagcggacgg cgaccggcgc ggggtggcga
     3301 cggcagcaaa ggcgctcgca ttgctgcgct attttcgcgg tgatttgccc ggggccgggg
     3361 aggtgtcggt gcgggtggcc gacgccgtgc gctcggcgga cgatccgcac gaggtggcta
     3421 acgagctcgc gcagagcgcg cgctgcctga cgctcgtggg ccgcgtcgaa gagtcgcgcg
     3481 agctgctcgg cgaagcgctc gaggtcggcc gcaagaacgg cgtcgctccc atcgagcttg
     3541 cgttcgcaca ggcgacgctc gcgcatttcg acggcgagct cgagcgtgcg gaagaattgt
     3601 ttcgtgcgac gctcgcggcg gcgcgccgtt tcgaggatca ttggcggggc tccgaagcgc
     3661 tggcgcgcct cgtgatgatc gcgctcgagc gggacgacct cgatgctgcg gctgggctcg
     3721 cgctggagct cgccgtcctc gcggaacgca tcgatcgcga cggcgccgag ctctttttcg
     3781 ccaaggcgct cagcgcgctc gtcgaggttc gcacgagcgt gcgcgggggc tctcgtccgg
     3841 agacggcgcc gctgctccac gccatcgagc ggctgcgggc catcgacacc aaggctttcc
     3901 tcgtattttc gctgaatgcc ttggccgagg tggaactcgg cgcgcgtttg cccgacgccg
     3961 ccgaaacgca cgcgacggag gcggcggcgc tcgcgcgccg gatcaagaat cgctccgagc
     4021 ttgccgtcgc gacgtcgctt gtcgctcgct cgtggcgcct tcgcggcgac gagccgcgtg
     4081 ctcgcgccgt catcgccgag gcgacggccg agctcacgtc cgatgaagaa atctcctcac
     4141 gtgcccgccg ccacctcgcg caggccaaga agctaacagc atgaccaccg ccgccgtcat
     4201 cgtcgtcgaa tacacgctca cgcctgacgt gcccgaaacg cccgagcgtc tcgcgcactt
     4261 gaagcggtgc ctggccgtgc gtgaagtgac gctgctgcgg agctacagct cgctcgacgg
     4321 tgccaaactc gtgcgagtgt tcgaggcgcc cgacgccgga gccgta
//
LOCUS       DATIML010000505         1963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5010911, whole genome shotgun sequence.
ACCESSION   DATIML010000505 DATIML010000000
VERSION     DATIML010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5010911"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VLJ38_08785"
     CDS             complement(<1..268)
                     /locus_tag="VLJ38_08785"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSU39651.1"
                     /translation="MPTYEYRCPNGHLFEVFKSINAPAPEVCPTCGEGPLEIVLHPVA
                     VHFKGSGFYSTDYGKGNRRKSDASKDGSSDYGSGSASGEKKDKSE"
     gene            315..1943
                     /locus_tag="VLJ38_08790"
     CDS             315..1943
                     /locus_tag="VLJ38_08790"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU39652.1"
                     /translation="MNEAAETTVPRARPLALAASPDTLFRIGVGALTAVVAAFLFARL
                     TVWPPHEDETLALFAGRGSVGQLIRTVLGERGGAPLHFLFAWVITHTGGGLVELRLVS
                     TFFAVASVPLIALLVHRLTDRATALVATAIVVPSWMLLFHGIYGRMYSIFLFTATLSY
                     IALLRALERRDRRHWLLWGLAMLVCIATHPYGALVLASQGLYVLCIRRLREGVLPFAA
                     VFVLAIPFWHSDTVLANRFDVGVGGGGTKLGSPFAILKYLARVAGDFTVGWLAVRVVV
                     LLLALAGLVLLARTWRRSAVFVACVLVTPFLFFAATRIGSGMASPESRHLIFVLPFFA
                     LLVALPLVRIARNRYGVVLVAVALVALGAGEVAWGMHNTRTLYVGEAALRTSSREAAS
                     TWLASTSRPSDILFGYDPVFLGAWEQNRSFSDVVVPRADTKLALHVLYQQPKPLGRGL
                     WVLDASDNNNFTPRLHIPLRYPRPASKFDARVFGPFLVIRSRKPTGTIREFLLETQAV
                     QLVGQSLYLGDSDINLLTVERALGLRGLDAGGPR"
BASE COUNT          238 a          687 c          657 g          381 t
ORIGIN      
        1 tctccgactt gtccttcttc tcgcccgagg ccgagccgga gccgtagtcc gagctaccgt
       61 ccttcgacgc gtcgctcttg cgccggttgc ccttgccgta gtcggtcgag tagaagcccg
      121 agcccttgaa gtgcacggcg acgggatgaa gcacgatttc gagaggccct tcaccgcagg
      181 tcgggcaaac ctcgggtgcc ggcgcgttga tcgacttgaa cacctcgaag aggtgaccgt
      241 tcggacaacg gtattcgtac gtcggcaccg gcttaggcta ccagcgtccc ctgtcgtttc
      301 cggataatcc cacggtgaac gaagccgccg agacgacggt tccacgcgcg cgcccgctcg
      361 cgttggcggc gtcgccggac acgttgttcc gcatcggcgt cggagcgctg acggcggtcg
      421 tcgccgcgtt cctcttcgcg cgcttgacgg tctggccgcc gcacgaggac gagacgctcg
      481 cgctcttcgc cggccgtggt tcggtcgggc agctgattcg gacggtgctc ggcgagcgcg
      541 gcggcgcgcc gctccacttc ctcttcgcgt gggtgatcac gcacacgggg ggcggactcg
      601 tggagcttcg gctcgtctcg acgttcttcg cggtcgcgag cgtgccgctg atcgcgctgc
      661 tcgtccaccg gctcaccgac cgcgcaaccg cactcgtcgc gacggcgatc gtggtaccga
      721 gctggatgct gctcttccac ggcatctacg gccggatgta ctcgatcttc ctcttcaccg
      781 cgaccctgtc gtacatcgcg ctgctgcggg cgctcgagcg gcgcgaccgg cgccactggc
      841 ttctttgggg gctcgccatg ctcgtctgca tcgcgacgca cccctacggc gcgctcgtgc
      901 tcgcgtcgca ggggctctac gtcctttgca tccggcggct gcgcgaggga gtgctcccgt
      961 tcgccgcggt gttcgtactc gcgattccgt tctggcacag cgacacggtg ctggcaaacc
     1021 gcttcgacgt cggcgtcggc ggcggcggta cgaagctcgg cagtccgttc gcgattctca
     1081 agtacctcgc acgggtcgcc ggtgacttca cggtcgggtg gctcgccgtg cgggtcgtcg
     1141 tgctgttgct cgcgcttgcg gggctcgtgc tgctcgctcg cacgtggcgg cgcagcgccg
     1201 tcttcgtcgc gtgcgttctc gtgacgccgt tcctattctt cgcggccaca cggatcggca
     1261 gcgggatggc gtcgcccgaa tcgcgccact tgatcttcgt gctgccgttc ttcgcactgc
     1321 tcgtggcgtt gccgctcgtg cgcatcgcgc ggaaccgcta cggcgtcgtg ctcgtggccg
     1381 tagccctggt cgcgctcggg gccggagagg tcgcgtgggg gatgcacaac acgcggacgc
     1441 tctacgtcgg cgaggctgcg ctccgcacgt cgtcgcgcga ggctgcatcg acgtggctcg
     1501 cgtcgacgag caggccgagc gacattctct tcggctacga cccggtgttc ctcggcgcgt
     1561 gggagcagaa ccgttcgttc tcggacgtcg tcgtgccgcg cgcggacacg aagctcgcgc
     1621 tgcacgtgct ctatcagcag ccgaagccgc tcggccgtgg cttgtgggtg ctcgacgcga
     1681 gcgacaacaa caacttcacg ccccggctgc acattccgct ccgctatccg cgcccggcgt
     1741 cgaagttcga tgctcgcgtc ttcgggccgt tcctcgtcat ccgcagccgc aagccgaccg
     1801 ggacgatccg cgagttcctg ctcgagacgc aggcggtgca gctcgtcgga cagtcgctct
     1861 acctcggcga ctccgacatc aacctgctca cggtcgagcg cgcgctggga ctgcgcggcc
     1921 tcgacgcggg cggtccgcgc tagcgacgct cggcttcggc ttc
//
LOCUS       DATIML010000506         2138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2698240, whole genome shotgun sequence.
ACCESSION   DATIML010000506 DATIML010000000
VERSION     DATIML010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2698240"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1344)
                     /locus_tag="VLJ38_08795"
     CDS             complement(<1..1344)
                     /locus_tag="VLJ38_08795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39653.1"
                     /translation="MLLVALVGCGGAQKPAPETPKPPAPKPAPVVETADLSPVSAPPG
                     LFVVGRVKRPTAVADTLAHWAGVPLGLRDLLPFSAKDLDAVLAWDAPVELAVCVAPNG
                     RRGGIEAGLSIGLTSTQQALAAAHGQGYELKRLAPEIYGILGIPHASCAIAPAIGSAL
                     ARLVCTHRASELEDLLPYMTRGLPNEPLGERELELELRVEPLRQRFASEIGSARLFAG
                     FLVRELQLDAPRFDTAVSDTAYALADELVAVVHDVNVIKLEASVDEQKRELDADLSVS
                     FGDHKSWSASMLAEHGKHRGPAPDKFFAQPADAASAAYYYPHDPAIYERMSAGLVELA
                     DAYLEQAKVGKLTRQRVTRVFETYFRWDGAGVNASGTDPVEPAKKGDPQSSGDWMVLR
                     VDNAPPTLKGLLPDLAAVLSDRQVRAAFARTLKVEDKELATARLVPLTGPGIPGGT"
     gene            complement(1461..>2138)
                     /locus_tag="VLJ38_08800"
     CDS             complement(1461..>2138)
                     /locus_tag="VLJ38_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSU39654.1"
                     /translation="YSTASDNQTSVEIHVLQGERAGARDNRTLGKFHLEGLPPAPRGV
                     PKVEVTFDIDANGILSVMAKDMATGKDQKITITASSGLNKDDIDRMVKEAASHEAEDN
                     RRREEIERRNKLDSLTYQLEKQIAENKEKLGGMDLGAIEVLIKEGRAAVEQQDDAKVT
                     EVSAKLEKEAHALATKLYESAGGPGGPAPGGPGQGPGPGGPSGGSDGGGDGKKKDVID
                     AEFEETT"
BASE COUNT          305 a          717 c          736 g          380 t
ORIGIN      
        1 ggtcccgccc ggtatgcctg gacctgtgag cggcaccagc cgggcggtcg caagctcctt
       61 gtcctcgacc ttcagcgtgc gagcgaaggc agcgcgcacc tgacggtcgg aaaggaccgc
      121 ggcgaggtcc ggcaagagcc ccttgagtgt cggcggcgcg ttgtcgacgc gaagcaccat
      181 ccagtcgccg ctgctctgcg gatcgccttt tttcgccggc tcgacgggat ccgtcccgga
      241 cgcgttcaca ccggcgccgt cccaacggaa gtacgtctcg aacacccgcg tcacgcgctg
      301 ccgcgtcagc ttgccgactt tggcctgctc gaggtacgcg tcggcgagct ccacgagccc
      361 ggcgctcatg cgctcgtaaa tggcggggtc gtgcggatag taataagcgg cggaagccgc
      421 gtccgcgggc tgggcaaaga acttgtcggg cgcggggccc cggtgcttgc cgtgctcggc
      481 gagcatgctc gcgctccacg acttgtgatc gccgaagctg accgaaagat cggcgtcgag
      541 ctcgcgcttc tgctcgtcga cgcttgcttc gagtttgatc acgttgacgt cgtggacgac
      601 ggcgacgagc tcgtcggcga gcgcgtaggc cgtgtcggag acggccgtgt cgaagcgcgg
      661 cgcgtcgagc tggagctcgc gcacgagaaa accggcgaac agccgggcgc tgccgatctc
      721 ggaggcgaaa cgctggcgca ggggctcgac gcggagctcg agttcgagct cgcgctcacc
      781 gagcggctcg ttcggcaagc cgcgcgtcat gtacggcaag agatcctcga gctcggaggc
      841 gcggtgcgtg cagacgagcc gcgcgagcgc ggagccgatg gccggcgcga tggcgcagct
      901 cgcgtgcgga atgccgagga tgccgtaaat ctccggcgcg aggcgcttga gctcgtaccc
      961 ctggccgtgc gcggccgcga gcgcctgttg cgtgctcgtg agcccgatcg agagcccagc
     1021 ttcgatgccg cctcggcgtc cgttcggcgc gacgcatacg gcgagctcga cgggcgcgtc
     1081 ccaagcgagc acggcatcga gatccttcgc gctgaacggc aggagatcgc gcaaaccgag
     1141 aggcacgccc gcccagtgcg cgagcgtgtc ggcgaccgcc gtcggccgct tcacgcgacc
     1201 cacgacgaac aagccgggcg gcgcactgac gggcgagagg tccgccgtct cgacgacggg
     1261 agcgggcttc ggtgcgggcg gcttgggcgt ctcgggagcg ggcttctgcg cacctccaca
     1321 accgacgagc gccacaagga gcacccaaga cctccaaagt cccagcatgg ccggaacttt
     1381 acaggcttcg gggcgtcctg tggcgctctt tttgggcgag ctaattcgct acgccgccgg
     1441 cattcgattc gctaccgcac tcaggtcgtc tcttcgaact cggcgtcgat gacgtccttc
     1501 ttcttgccgt cgccgccgcc gtcggagccg ccgctcggcc caccgggacc gggaccctga
     1561 ccggggccgc caggcgccgg accgccggga ccgcccgccg actcgtagag cttggtcgcg
     1621 agcgcgtggg cttccttctc gagcttggcg ctgacctcgg tgaccttcgc gtcgtcctgt
     1681 tgttcgacgg ccgcgcggcc ctccttgatc aggacctcga tcgcgccgag atccataccg
     1741 ccgagctttt ccttgttctc ggcgatctgc ttttcgagtt ggtaggtgag gctgtcgagc
     1801 ttgttgcgtc gctcgatctc ctcacgccgc cgattgtctt cggcttcgtg cgaagcggct
     1861 tccttcacca tccgatcgat gtcgtccttg ttgaggccgc tcgatgccgt gatggtgatc
     1921 ttttggtcct tgccggtcgc catgtccttg gccatgaccg acaagatgcc gttcgcgtcg
     1981 atgtcgaacg tgacctcgac cttcggaacg ccgcgcggag ccgggggcag cccttcgagg
     2041 tgaaacttgc cgagggtacg gttgtcccgt gcgccggcgc gctcgccctg caggacgtgg
     2101 atttcgaccg acgtctggtt gtcgctcgcg gtcgagta
//
LOCUS       DATIML010000507         3383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1544868, whole genome shotgun sequence.
ACCESSION   DATIML010000507 DATIML010000000
VERSION     DATIML010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1544868"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VLJ38_08805"
     CDS             complement(<1..737)
                     /locus_tag="VLJ38_08805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39655.1"
                     /translation="MLSSRFPRLTALPLALAVAFAACSSPSSGGGTAGVGGSTAAGTG
                     GTSALATGGSTGGSSLLAGQGGGGASGGLGGTGVAANGGAVGNGVTGGTGGGAAGLSS
                     AAGRASSDAGNGGTSSSGAGNAGTVGGSGGVGATSGAAGTSAGAGASAGMSAGGTSGV
                     GCAAVAGKILCEDFESEAAGSLPTGAPWAPLNCFDSTHVLKVDGAAQHGGAQSLLGEN
                     IPYADCQLHADLGTSLGEYWVRAWVYYG"
     gene            762..1880
                     /gene="rlmN"
                     /locus_tag="VLJ38_08810"
     CDS             762..1880
                     /gene="rlmN"
                     /locus_tag="VLJ38_08810"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:TIGR00048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HSU39656.1"
                     /translation="MIGLPERASPRYRREMLVPSATLGEACDSWALEPAELDALATGV
                     SGRTLFSALQRPWRWHAGRPALGARAARAVAERGAALPSIATRRRSSDGAEKLVLVMP
                     QGGDGVEAVHMPRPVGQGRVTLCVSSQVGCALGCAFCATAALGLGRHLSAGEIIAQVL
                     LVLHELGPRHPGDLSLVFMGMGEPLHNFENVVRAVRVLTTAGGLGLSPRRITLSTAGL
                     VPAIAALARVPARPLLAVSLNATRNELRDALMPINRRYPLEALIGALERYPCRPRERI
                     TIEYVLLAGVNDEPADAARLAELCAGFPHHVNVIPFNSHPGARFQSPSEERLDAFLQA
                     LVRRRPTLVTVRRSRGGDVDGACGQLAGSRRLALAPAG"
     gene            complement(1904..2890)
                     /locus_tag="VLJ38_08815"
     CDS             complement(1904..2890)
                     /locus_tag="VLJ38_08815"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU39657.1"
                     /translation="MQAGSVSGAARGGTYEARQALPGVLVLVVLACSPALDPPPPPKS
                     AQAPAAPSATPLFEQGNATCDKRMAAALSRQTTVAGKLELYEHACALGCAVACDGAGT
                     LLRTGPAELQSDERAAAYYERACAAKAPRGCVHLGELRERGQGTARSLAAARQAYDAA
                     CDLGDGDGCAAHGELLEAEPADLTAAFAEYTRGCALDSGRACARLAGAHERGDEVTRE
                     PARAVELYQRACELKSALGCIGAARLLRTAPDGVDPAHIERLERAAATLAADGCNDGE
                     GQACALLGDAYRDGAGVEQDVKRAAWLYALGCKEGVEAACEGLKRLPATTPP"
     gene            3021..3356
                     /locus_tag="VLJ38_08820"
     CDS             3021..3356
                     /locus_tag="VLJ38_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39658.1"
                     /translation="MFEPNPTQDDNLFTDYCDAESNWGPLLAFRPARHERIGIGRAFS
                     MSLLLGCLFGVVGNVLLLLAGRLLERPVLSPWVLPAVLTGVYFLVGRLTFVPAWNRRA
                     ARLSRLSKR"
BASE COUNT          466 a         1266 c         1117 g          534 t
ORIGIN      
        1 ccgtaataga cccaggcgcg cacccaatac tcacccaggg acgtgccgag atcggcgtgt
       61 agctggcagt cggcgtaggg gatgttctcc cccaagagtg attgcgcgcc gccatgctgc
      121 gcggctccgt ccaccttgag cacatgggtg ctgtcgaagc aattgagcgg tgcccatggc
      181 gcgcccgtcg gcagcgatcc cgccgcctcc gattcgaaat cctcgcacaa gatcttaccg
      241 gccaccgcag cgcacccgac gccactcgtg ccacccgcgc tcatccccgc gctcgctccc
      301 gcaccggcgc tggttccagc tgcgccgctc gttgcaccga cgccgccgct accgccgacc
      361 gtacctgcgt tgcccgcgcc ggagctgctc gttccgccgt tccccgcgtc gctgcttgcc
      421 ctgcccgccg cggagctgag cccggcagcg ccgccacccg tcccgcccgt gacgccgttg
      481 ccgacagcgc ctccgttcgc tgcgacaccg gtgcccccca aaccaccgga cgcaccgcct
      541 cccccttggc cagcgagcag gctcgagccg ccggtcgagc cgcccgtcgc tagggcgctc
      601 gtgccgccgg tgcccgccgc agtcgagcca ccgaccccag ccgttccgcc accgctcgat
      661 ggggaagaac acgcagcgaa agcgacggca agggcgagag gcagcgcggt aagccgagga
      721 aaccgggatg aaagcatgag agttagcgat agcacgccgc catgatcggg cttcccgagc
      781 gtgcgtctcc gcgctaccga cgcgagatgc tcgtgccctc ggcaacgctc ggcgaagcat
      841 gcgacagctg ggcgctcgaa cccgcggagc tcgacgctct cgcgacgggc gtgtccgggc
      901 gcactttgtt ttcagccctg cagcggccat ggcgctggca cgcgggacga cccgcgctcg
      961 gtgcgcgcgc cgcgcgtgca gtcgccgagc gaggcgcggc gttgccgtct atcgccacgc
     1021 ggcgccgctc gagcgacggc gccgaaaagc tcgtcctcgt catgccccaa gggggcgatg
     1081 gcgtcgaagc cgtccacatg ccgcgccccg tcggccaggg ccgcgtcacg ctctgcgtct
     1141 cgagccaagt cggctgcgcg ctcggatgcg ccttctgcgc gacggccgcg ctcggtcttg
     1201 ggcgtcacct cagcgcgggc gaaatcatcg cgcaagtctt gctcgttctc cacgagctcg
     1261 ggccgcgtca ccccggcgac ctgtcgctcg tcttcatggg catgggcgag cccctgcaca
     1321 acttcgaaaa cgtcgttcgc gccgtgcgcg tgctcaccac ggcgggcggg ctcgggctct
     1381 cacctcgtcg catcaccctt tcgacggctg ggctcgtgcc ggcgatcgca gcgctcgcgc
     1441 gcgttccggc gcggccgctg ctcgccgtga gcctcaacgc gacgaggaac gagctgcgcg
     1501 acgcgctcat gcccatcaat cgtcgctacc cgctcgaggc gctgatcggc gcgctcgagc
     1561 gctacccgtg tagaccgcgc gaacgcatca ccatcgagta cgtgctgctc gccggcgtga
     1621 acgacgaacc cgcggacgcg gcacgtctcg ccgagctctg cgctggattt ccccaccacg
     1681 tcaacgtgat cccgttcaat tcacacccgg gtgcgcgctt tcaatcgccg agcgaggagc
     1741 gcctcgacgc gttcctgcaa gcgctcgttc gtcgtcgacc gacgctcgtc acggtgcgcc
     1801 gctcacgggg cggcgatgtc gatggagcat gcggccagct cgctgggtcg cggcggctcg
     1861 cgctcgctcc cgccggctga attcgcgggc gtttcggcgg agctcacggc ggcgtcgttg
     1921 ccggcaggcg cttcaagcct tcgcacgccg cttcgacgcc ttctttacag ccgagcgcat
     1981 agagccacgc cgcacgcttc acgtcttgct cgacgccggc gccgtcgcgg tacgcgtcgc
     2041 cgagcagcgc gcacgcttgc ccctcgccgt cgttgcagcc gtctgctgcg agcgtggcgg
     2101 ccgcgcgttc gagccgctcg atatgcgccg gatccacgcc gtccggcgcc gtccggagca
     2161 gccgagcggc gccgatgcag ccgagggcgg atttgagctc gcaggcgcgc tggtacagct
     2221 cgacggcacg cgcgggctcg cgtgtgacct cgtcgccccg ctcgtgggcc ccggcgagcc
     2281 gcgcgcaggc tcgcccgctg tcgagcgcgc acccgcgcgt gtactcggcg aacgcagccg
     2341 tcagatcggc tggttcggct tcgagcaatt cgccgtgcgc cgcgcaaccg tcaccatcac
     2401 cgaggtcgca cgcagcgtca taggcttgcc tcgccgcggc gagactacgc gccgtcccct
     2461 gcccacgctc tcggagctcg ccgagatgaa cgcacccgcg cggggccttg gccgcgcaag
     2521 cgcgctcgta gtaggcggcg gctcgttcat cgctctggag ctcggcaggc ccggtacgca
     2581 gcagggtacc cgcgccatcg caggccaccg cgcaaccgag cgcgcacgcg tgctcgtaga
     2641 gctcgagctt gccggcgacc gtggtttgcc gcgacaacgc ggccgccatc cgcttgtcgc
     2701 aagtcgcgtt gccttgctcg aagagcggcg tcgcgctcgg agcggccggt gcctgcgcgg
     2761 atttcggtgg cggcggcggg tcgagtgcgg ggctgcaagc gagcacgacg agaacgagca
     2821 ctccggggag cgcctgacgt gcctcgtacg ttccgccccg cgcggcgccg ctgacgctcc
     2881 ctgcctgcac ctggaaaggg tcgcgcctcg tgagccgccg ctcaagtaaa agatttgtca
     2941 aaagcgctcg cacaaacggg cccgcgtttg cgaggagccg ctcggcgtgt caaaaaacaa
     3001 ggctccgggg tctaactttg atgttcgagc cgaatcccac gcaggacgat aacctcttca
     3061 ccgactactg cgacgccgaa agcaactggg ggccgctgct cgcgttccgc ccggcacgcc
     3121 acgagcggat cggcatcggc cgtgccttct cgatgagcct cttgctcggc tgccttttcg
     3181 gtgtggtcgg caacgtactc ttgctgcttg cgggtagact tttggagcgg ccggtgctct
     3241 cgccgtgggt gctcccggca gtgctcaccg gcgtctattt cttggtcggc cgactcacct
     3301 tcgtcccggc ttggaaccgc cgggcggcac gactgtcgcg actgtcgaag cgctgaggcg
     3361 agcgcctcct ggcgcctcgc gcg
//
LOCUS       DATIML010000508         2377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2698463, whole genome shotgun sequence.
ACCESSION   DATIML010000508 DATIML010000000
VERSION     DATIML010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2698463"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1578
                     /locus_tag="VLJ38_08825"
     CDS             <1..1578
                     /locus_tag="VLJ38_08825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39659.1"
                     /translation="PTPRHAVVPSTAVVPSTAVAPSTAVAPSTAVAPSTAVAPSTAVA
                     PSHAIAPSTAVAPSHAVPPTAPNLDAVAPTELRPALFTPSSAVTSPMNERPSAAPVDD
                     LLRDLDRTLGSTPFEPGHAADVPAPSTTLESAGPSVLADKGPEPGHGLSWTLPIPRSV
                     AIVLAVFLSGVLLLGGAAWVFSSRRQVTSAASAAPSAAPAPTEVAGCRLLSPAARLAT
                     TVERSVQPALAEVVTGERVAVGFASAPKTAAGALVRLDTLDVERRPDQNGDAPVRASA
                     PVIRNGSASFVVDRSGGELGGARTLPDGTTIGFAGADLVRRVGGKNSVLAAGAASDKT
                     TDPRVSAGAAGALVTFRRGGLSGQVLYTWAGPGPANGDLTPVSAPGVKFSGTPDAAAS
                     STGGLIAFAGRASETADWRVQLVTVPLRGAASVKQFATPAGGSGGGNIAPAVSALGDD
                     GWLLQWTEGATGAYQVRLARLSAKLEPIGDARLVSPKGANAGQGALIATGSRVLSVYI
                     QTTAGHDELWGASFECK"
     gene            1575..>2377
                     /locus_tag="VLJ38_08830"
     CDS             1575..>2377
                     /locus_tag="VLJ38_08830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39660.1"
                     /translation="MTTRLGARFALAFALLTPSACQLLGKPGPSAVAQGRYYASGNPE
                     YDAFFVELHRLQVELKDSPERTAEPRAALAQALDVGLDADVIKEALRKKATELNGRQI
                     KFSVQRPATEDKPFTLRVSGNPAGADAALQKTLEETLAKVSELKTATNGWQESLKPLP
                     DRAATLESGVDTPFANSPPRTVTEVKSNLSDGRKVIELLVSRADDAAKANDELLAAIT
                     GALGEVPAPGGEKPSEAAPSTEGPNCEKSSDKKGRKAVPPPEKHSKATKP"
BASE COUNT          381 a          877 c          807 g          312 t
ORIGIN      
        1 cccactccgc gccacgccgt cgtcccgagc accgccgtcg tcccgagcac cgccgtcgcg
       61 ccgagcaccg ccgtcgcgcc gagcaccgcc gtcgcgccga gcaccgccgt cgcgccgagc
      121 accgccgtcg cgccgagtca cgccatcgcg ccgagcaccg ccgtcgcgcc gagtcacgcc
      181 gtgccgccaa ccgccccgaa cctcgatgcg gtggcgccga cggagctgcg gcccgcgttg
      241 ttcacaccga gcagcgccgt gacgagcccg atgaacgagc gcccttccgc ggcgcccgtc
      301 gatgatttgc tgagggactt ggatagaacg ctcggttcga cgccgttcga gcccggacac
      361 gcagccgacg tcccagcgcc gagcacgacg ctcgaaagcg ccggaccctc ggtgctggcc
      421 gataagggac ccgaacccgg gcacgggctc agctggacgt tgccgatccc gcgctcggtg
      481 gcgatcgtcc tcgcggtttt tctgagcggc gtcttgctcc tcggcggcgc tgcttgggtg
      541 ttctcgtcgc gccgtcaagt cacgtccgcc gcgtcggccg cgccatcggc ggcccctgcg
      601 ccgaccgaag ttgcgggctg ccggctgctc tcacctgcgg cccgcctcgc cacgacggtc
      661 gaacgctccg tgcagcccgc gctcgccgaa gtggtcactg gcgagcgcgt tgccgtcggc
      721 tttgcctccg cgcccaagac ggcagccgga gcgctcgtcc gactcgacac cctcgatgtc
      781 gagcgccgtc cggatcaaaa cggcgacgcg ccggtgcggg caagcgctcc cgtcatcaga
      841 aacggctcgg cctcgttcgt cgtcgaccgc tcgggcggcg agctcggcgg cgctcgcacg
      901 ctgcccgacg gcacgaccat cggctttgcg ggcgccgacc tcgtgcggcg cgtcggcggc
      961 aagaactccg tgctcgcagc gggcgccgcg agcgacaaga cgacggatcc gcgcgtctcc
     1021 gccggcgccg cgggcgcgct cgtcacgttt cggcgcggcg gcttgtcggg ccaggtgctc
     1081 tacacgtggg ccgggcccgg ccctgccaac ggcgatttga cgcccgtcag cgcgcccggt
     1141 gtgaagttct ccggcactcc cgacgccgcg gcgagcagca ccggcgggct catcgcgttc
     1201 gccgggcgag cgtccgagac ggcggattgg cgcgttcagc tcgtcacggt gccgctccgg
     1261 ggcgcggcga gcgtgaaaca attcgcgacg cctgcgggcg ggtccggcgg cggcaacatc
     1321 gcgccggccg tgagcgcgct cggcgacgac ggctggctct tgcagtggac cgaaggcgcg
     1381 accggcgcgt accaagtgcg cctcgcgcgc ttgagcgcga agctcgagcc gatcggggac
     1441 gcgcggctcg tctcgccgaa aggcgcgaac gcgggacaag gcgccttgat cgcgacgggc
     1501 tcgcgcgtgc tctcggtgta tatccagacg acggccggcc acgacgagct ctggggagca
     1561 agcttcgaat gcaagtgacc acgcggctcg gtgcacgctt cgcgctcgcg ttcgcgctgc
     1621 tcactccctc ggcgtgccag ttgctcggca agccggggcc gagcgcggtc gcacaaggcc
     1681 gctattacgc gagcggcaac cccgaatacg acgccttctt cgtcgagctc catcgcctgc
     1741 aggtcgagct caaggattcg cccgagcgca cggcagagcc ccgcgcggct ctcgctcagg
     1801 cgctcgacgt ggggctcgac gccgacgtga tcaaggaagc cttgcgcaag aaggcgaccg
     1861 agctcaacgg ccgccaaatc aaattcagcg ttcaacgccc ggcgacggag gacaaaccgt
     1921 tcacgctacg tgtgtcgggc aatccggcgg gcgccgacgc cgcactccaa aaaactctcg
     1981 aagagacgct cgccaaagtc tcggagctca aaacggcgac gaacggctgg caggaatcgc
     2041 tcaaacccct gcccgaccgc gccgccacgc tcgagagcgg cgtggacacg ccgtttgcca
     2101 atagtccgcc gcgcactgtc accgaagtca aaagcaacct gagcgacggt cgcaaagtca
     2161 tcgagctctt ggtgtcacgc gccgacgacg cggccaaagc caacgacgag ctactcgcag
     2221 cgatcacggg cgccctcggc gaagtccccg cgcccggcgg cgagaaacca agcgaggcag
     2281 cgccgagcac ggaggggccg aactgtgaga agagcagcga caagaagggt cgcaaggcgg
     2341 ttccgccacc ggagaagcat tcgaaagcga cgaagcc
//
LOCUS       DATIML010000509         4522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_967155, whole genome shotgun sequence.
ACCESSION   DATIML010000509 DATIML010000000
VERSION     DATIML010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_967155"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..1083)
                     /locus_tag="VLJ38_08835"
     CDS             complement(181..1083)
                     /locus_tag="VLJ38_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39661.1"
                     /translation="MRLDLRAGFAVAACVLAASCQKEPEASPALPPPALTIPAATASA
                     MPAASANPVAATSSSASTPAPAATPAEYPMCGGQKLAGAAPTSRSGAVSAQLAPAFLD
                     EMSACRAEDVPPADVIARTTDGSINEKGDCVFASSGVSCHYHSGSEFVTKAGAKQTPG
                     QGELHCIFPSSDPKSPRVFGGHVSCRDPSQGMASAEPGKHEVKAGATCSAALLQELTH
                     CSSSRCCDDGTLTNPIADLVKDGRNDVRPDFRICADTLSVDCELLANLTPHDANSPAL
                     GGIAKPVFVLKHSAHGKKVAAHTP"
     gene            complement(1097..1837)
                     /gene="aqpZ"
                     /locus_tag="VLJ38_08840"
     CDS             complement(1097..1837)
                     /gene="aqpZ"
                     /locus_tag="VLJ38_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015250 - water channel activity [Evidence
                     IEA];
                     GO_process: GO:0006833 - water transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HSU39662.1"
                     /translation="MSMGKRAAAEFLGTFWLVFGGCGSAVLSAAFPGVGIGLHGVSLA
                     FGLTVLTMAYAIGHISGCHLNPAVSLGLAVAKRFPMREVPTYAAAQVSGAVLASAVLF
                     FIASGQAGFDVSAGFASNGYAEHSPGHYALSAALTSETVLTFMFLMIILGATDSRAPA
                     GFAPIAIGLGLTLIHLIGIPVTNVSVNPARSTGPALMVGGWALTQLWLFWVAPLAGGA
                     LAGVVYPLLASESAPASERVPEAATPAE"
     gene            complement(2016..2552)
                     /locus_tag="VLJ38_08845"
     CDS             complement(2016..2552)
                     /locus_tag="VLJ38_08845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39663.1"
                     /translation="MFKMIAATSSLVITSLLPCLAHAEAESQAKPINLALFTPVQIFP
                     KEASIHGFRFSLLYGVNHEMHGFDLGLVNRATGSVVGMQWGIVNWSESTLKGLQLGAV
                     NYLDGESVGGQVGTVNIQQAGTGLQWGIVNYSPRVKGLQLGLVNVTDELKGLQIGLVN
                     VAKNGFLPVFVLFNFNFD"
     gene            2707..>4522
                     /locus_tag="VLJ38_08850"
     CDS             2707..>4522
                     /locus_tag="VLJ38_08850"
                     /inference="COORDINATES: protein motif:HMM:NF036483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39664.1"
                     /translation="MLADSFVASVAAAEGFVEVRGAREHNLKNIDVDIPRGKLVVFTG
                     VSGSGKSSLAFGTLYAEAQRRYLDSVSPYARRLFHQLSVPEVDRIAGLPPAVALAQQR
                     GGVTTRSSVGSVTTLSSLARMLYSRAGDYPPHQELLYAESFSANTAEGACPRCSGLGR
                     IYDVSEALMVPDASLTIRERAVAAWPTAWQGQNLRDILTTLGHDVDVPWQKLPKRTRD
                     FILYSDEQPTVPVYAGYTLAEVKRALKRKEEPSYQGTFSSARRHVLQSFTTSESALMK
                     RRAAAFLTSTSCPECHGKRLRREALSVKFAGRDISELSRLPLKRLHELFVPYARGDAR
                     SDRARSPEKAIVVRRIAEDLQRRLAVLLDLGLGYLDLERSTPTLSPGELQRLRLGTQV
                     CSSLFGVVYVLDEPSAGLHPADTAALLRALEGLKAAGNSLFVVEHELDVIRHADWIVD
                     VGPGAGQHGGEVLYSGPLAGLGRVPRSVTGKYVFGARTELNAEPRRARGLLRLAHATI
                     NNLNDFSVEFPLGTLTCVTGVSGSGKTTLVSRVLVDLLRDRLGQAQPAGEDELDPLER
                     PETASFGDATLEGAFAVKRLIVVDQKPIGRTPRSNLATY"
BASE COUNT          794 a         1459 c         1496 g          773 t
ORIGIN      
        1 aagcagcatg ctgctcgcgg cccatgtctt ctgcctgcgc atgggggcga gcatacccgg
       61 cgctcgagca ttcccagctg actcgagcac gtagacgcat tttttgcgcc tttggcacta
      121 cgtcagagtc ttgcaaggcc gatcacgatc ggcgagagcg aggcgattgg ccgaatcagc
      181 tcacggcgtg tgggcggcga ccttcttgcc gtgcgcagaa tgtttcaaga cgaacactgg
      241 tttcgcgata ccgccgaggg ccggactgtt cgcgtcgtgc ggagtgaggt tcgcgaggag
      301 ctcgcagtcg acgctgagcg tgtcggcaca gatgcgaaaa tcggggcgaa cgtcgttgcg
      361 gccgtccttc acgagatcgg cgatcgggtt cgtgagcgtg ccgtcgtcgc aacaacgcga
      421 gctcgagcag tgcgtcagct cctgcagcag cgccgcggag cacgtcgcac cggctttgac
      481 ctcgtgctta cccggctcgg cggacgccat gccctgcgac gggtcgcgac agctgacgtg
      541 gccgccgaaa acgcgagggc tttttggatc cgagctcggg aaaatgcagt ggagctcacc
      601 ttgtccgggc gtctgcttcg cgccggcctt cgtgacgaac tccgagcccg aatgatagtg
      661 gcagctcacg ccgctgctcg cgaacacgca gtcgcccttt tcgttgatgc tgccgtccgt
      721 cgtgcgcgcg atgacgtccg ccgggggcac gtcttcggcg cgacaggcgc tcatctcgtc
      781 gagaaacgcg ggcgcgagtt gcgcgctcac cgcgccgctg cgcgaggtgg gagcggcacc
      841 ggcgagcttc tggccgccgc acatgggata ttcggcgggg gtcgcggcag gggcgggtgt
      901 gctcgccgag ctgctcgttg ccgccacggg gttcgcgctc gctgccggca tggcgctcgc
      961 tgtcgccgcg ggaatggtca gcgcaggcgg cggcagagca gggctcgcct cgggttcctt
     1021 ttggcagctc gcggcgagaa cgcatgccgc gaccgcaaaa ccagctcgta aatccagacg
     1081 catgcttgct cctctactat tcggccggcg tcgccgcttc gggtacacgt tcggacgctg
     1141 gcgctgactc ggaagcgagc agcggataca cgacacccgc gagtgcgccg cccgcgagtg
     1201 gcgcgaccca gaatagccaa agctgagtca aggcccagcc gcccaccatc agtgccgggc
     1261 cagtgctgcg cgcgggattg actgaaacgt tggtgaccgg aatgccgatc agatgaatga
     1321 gggtgagacc gagaccaatg gcgatcgggg cgaagcccgc cggcgcgcgc gagtcggtcg
     1381 cgccgagaat gatcatcaga aacatgaagg tgagcacggt ctccgacgtg agcgccgcgg
     1441 agagcgcgta gtggcccggc gagtgctcgg cgtagccgtt ggaggcaaac ccggcgctca
     1501 catcgaagcc cgcttggccg ctagcaatga agaacaagac agccgaggcg agcaccgcgc
     1561 ccgacacttg cgcggcggcg tacgtcggca cctcccgcat cgggaagcgc ttggccaccg
     1621 cgagacccag gctgaccgcg gggtttaggt ggcaaccgga gatgtgtccg atggcgtagg
     1681 ccatcgtgag cacggtcaat ccgaaagcga gcgacacgcc gtgaaggccg atgcccacgc
     1741 ccggaaatgc ggccgacaac acggcgctgc cacagccgcc gaacacgagc caaaacgtgc
     1801 ccaaaaactc agccgctgcg cgctttccca tggacatgcg tcgctccctc gttgaaggcc
     1861 cgagcgtcaa tcgctcgttc gaacgaccga atcgtcgtgg agtccgacaa gttcgtcaat
     1921 cgatttgtac gccttgtgcg cgcggccgct catctggccc gccccccgga gcggcctttt
     1981 ggcgcgagcc aacgcgaaaa acttgcgcca aaccatcaat cgaaattgaa attgaacaag
     2041 acgaaaaccg gcaaaaatcc attctttgcc acgttcacga gaccgatctg taaccccttg
     2101 agctcatcgg tgacgttcac gagcccgagt tgcagaccct tgacccgcgg cgagtaattc
     2161 acgatgcccc attgcaagcc ggtgccggcc tgctggatgt tcaccgtccc gacctgacct
     2221 ccgacgcttt cgccgtcgag gtaattcacg gccccgagct gcaggccctt gagcgtgctc
     2281 tcgctccagt tgacgatgcc ccactgcatg cccacgaccg agcccgtcgc gcggttgacg
     2341 agacccagat cgaagccgtg catctcgtgg ttcacgccgt agagcaggct gaaacgaaag
     2401 ccgtgaatcg aggcttcttt cgggaaaatc tggacgggcg tgaagagcgc gagattgatg
     2461 ggcttggctt gagattcggc ctctgcgtgc gcaaggcaag gcaagagcga cgtaattacg
     2521 aggctcgaag tggcggcgat catcttgaac atggtgctct ccggaaaggc gcccttcgac
     2581 gcgggcggag cctagtcgca ccagagcggc ctctggaaga gcaagtcggc attttttacc
     2641 tcggtatggg gcgcatttaa tgcgcgtacg gcggatttgg cacatggctt gcaaagccgg
     2701 atacggatgc tcgccgactc tttcgtcgct tccgtcgctg ctgccgaggg tttcgtcgag
     2761 gtgcgcggcg cgcgcgagca caacctgaag aatatcgacg tcgatattcc tcgcggtaaa
     2821 ctcgtcgtct tcaccggtgt ctcgggttcc ggtaagtcgt cgctcgcgtt cggcactttg
     2881 tatgcggaag ctcagcgccg ctatctcgac tcggtttcgc cgtacgcgcg gcggctgttt
     2941 catcaactga gcgtccccga ggtcgaccgt atcgctgggc tcccgccggc cgtcgcgctc
     3001 gcgcagcagc gcggcggcgt tacgacgcgc tcctcggtcg gcagcgtcac gacgctctcg
     3061 agcctcgcgc gcatgctgta ctcgcgcgcg ggagattacc ccccgcacca agagctcttg
     3121 tacgccgaat cgttctcggc gaacaccgcc gagggcgctt gcccgcgctg ttccgggctc
     3181 ggtcgcattt acgacgtgag cgaagccttg atggtgccgg acgcttcgct gacgattcgg
     3241 gagcgggcgg tcgcggcttg gccgacggcg tggcaaggcc aaaatttgcg cgacatcctg
     3301 acgacgctcg gtcacgacgt agacgtgccg tggcagaagc tccccaaacg cacgcgtgac
     3361 ttcatcctgt actcggacga acaacccacg gtgcccgtgt acgcgggcta cacgttggcg
     3421 gaggtcaaac gggcgctcaa acgcaaggag gagccgagtt atcagggcac gttttcgagc
     3481 gcgcggcggc acgtcctcca gagcttcacg acatcggaga gcgcgctgat gaagcggcgg
     3541 gcggcggcgt tcctcacgtc aacgagctgc ccggagtgcc acggcaagcg cttgcgacgc
     3601 gaagcgctgt ccgtcaaatt cgcgggccgc gacatcagcg agctttcccg cttgccgctg
     3661 aagcgcctgc acgagctgtt cgtgccgtat gcgcgcggcg acgctcggag cgaccgcgcg
     3721 cgaagccccg aaaaagccat cgtcgtgcgg cgcatcgccg aggatctgca gcgacgcttg
     3781 gccgtgttgc tcgatttggg cctcggctat ctcgacctcg agcgcagcac accgacgctc
     3841 tcgccggggg agctccagcg cctgcggctc ggtacccagg tgtgctcgag tcttttcggc
     3901 gtggtctacg tgctcgacga accgtccgcg gggctgcacc ctgccgacac ggcggcgctc
     3961 ttgcgcgcgc tcgaggggct caaggccgcg gggaactcgc tcttcgtggt cgagcacgag
     4021 ctcgacgtga ttcgtcacgc cgactggatc gtcgacgtgg gaccgggcgc gggccagcac
     4081 ggcggagaag tgctctacag cggcccgctt gcagggctcg ggcgagtgcc gcgctcggtg
     4141 acgggcaagt acgtgttcgg ggcacgcacg gagctcaacg cagagccgcg ccgagcgcgc
     4201 ggtcttttgc gactcgccca cgcgaccatc aacaatctga acgacttcag cgtcgaattt
     4261 ccgctcggaa cgctcacttg cgtgacgggc gtctcgggct ccggcaaaac gacgctcgtg
     4321 agccgagtgc tcgtggacct gctgcgagac cgactcgggc aagcgcagcc ggccggcgag
     4381 gacgagctcg atccgctcga gcgccccgag acggcgagct tcggtgacgc cacgctcgag
     4441 ggcgccttcg ccgtgaagcg cttgatcgtc gtcgatcaga agccgatcgg ccggacgccg
     4501 cgctccaacc tcgcgaccta ca
//
LOCUS       DATIML010000510         3414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1545274, whole genome shotgun sequence.
ACCESSION   DATIML010000510 DATIML010000000
VERSION     DATIML010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1545274"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..529
                     /locus_tag="VLJ38_08855"
     CDS             <1..529
                     /locus_tag="VLJ38_08855"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU39665.1"
                     /translation="PVSPYAIHKLAFEQLLAVYERHRGIATRILRYANVYGPRQDPHG
                     EAGVIAIFLDSARAGRTLCVNALHTLGDAGCLRDYVYVTDVARMNELALAGTMTEPLA
                     NVCTGIGTTTRALAEAVIRAAGRAVPLESRPPRAGDVGLSVLDPTLPERYLGELVALE
                     WGLGRTAEWAQRASR"
     gene            627..2450
                     /locus_tag="VLJ38_08860"
     CDS             627..2450
                     /locus_tag="VLJ38_08860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39666.1"
                     /translation="MLRPLAQKLAARASSELRAAKAALPRALSAVREQLVAMRRYRWL
                     DWLQLASAVLVTAVFVLWFRDWYHGNVPALWDPKIQPDDARTAIFPFHRYEAGAPLST
                     DPIATEMLEYQPYGYRLIFRLCVPLVGVLFTTKIVQALLFGLIAYAGVVLVRSPRAGL
                     GAGLLLIFFFFHDQYVQNRVLGGLPRGFGFPLATLWLAGAIAERANVRRAAALLAALT
                     YPTALAMVLAAEGLFVVRRFGFPSFRTAWRRLRHYVLLVLACGVLLAPAVVVGMSQGG
                     PIHTLEQAKREPAFQGRLRVLPFGDPGKEFGVVLSEVYSHYREGDSPFPNFKSHVDEY
                     EHEVGVTMLALFLILPLMGWSMGLGSVARFLAANLVLYALSRFFAFRLYSPERFYSVG
                     MRSVALALAASSLGLVGPGLPTHWRSIARNLTSAVALAFVWFGIGNGVRVPAMGATID
                     YRNEAPLWDFIRGLPPDTRVASHIMDGDEIPLFTARATNGTAETLQPWLTLSWQRQKA
                     RAEDTLRAMYATDRDDVLAFAHKYRITHLLVNKNRYKDDFRARAKSFEPFTSFTNRLL
                     SGASADNFVLASPPADAIVFRFHQWQLIDVAKLEADWEHAS"
     gene            complement(2484..>3414)
                     /locus_tag="VLJ38_08865"
     CDS             complement(2484..>3414)
                     /locus_tag="VLJ38_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39667.1"
                     /translation="VFHAFVPNSAAAKVGGFELSAGATYLYKTFGKTSYLLAVAGVLG
                     AALCLREALATKTSSRGPLLVAWTLAMASFVVSSGGDWMPAGRLVAPMLPALSALAAF
                     AVARFAAQSAPAGWAALALLVFVNVRSELKFGNSRENGSFSGEAAHDGEDALVGPAKP
                     DFAFTEFGNKAHRRDARLLGVLLDTLTRLAPSPAHPLYVMSGQAGMVPYYAFGQHFGA
                     LKFIDLFAITTRDILACVPDDKQQRGIHGVRLDPGYIIDHADDMPAACAARRPDVVFS
                     TGRFPRYLAERGYENVYQGPRELEAYIAVAPKR"
BASE COUNT          496 a         1145 c         1167 g          606 t
ORIGIN      
        1 gccggtgagt ccctacgcga ttcacaagct cgcgttcgaa cagctgctcg ccgtctacga
       61 acggcaccgg ggtatcgcga cacgcatttt gcgttacgcc aacgtttacg gcccgcgcca
      121 ggacccgcac ggtgaagctg gcgtcatcgc cattttcctc gactccgcgc gtgcggggcg
      181 cacgctctgc gtgaacgcct tgcacacgct cggcgatgcc ggctgcttgc gcgactacgt
      241 gtacgtgacc gatgtcgcgc gcatgaacga gctggcgctc gcgggcacca tgaccgaacc
      301 gctcgcgaac gtgtgcaccg gcatcggcac gacgacgcgc gcgctcgcag aggccgtgat
      361 ccgggcggca gggcgtgccg tgccgctcga aagccgaccg ccgcgggccg gcgacgtcgg
      421 actttcggtg ctcgatccga cgttgccgga gcgctacctg ggcgagctcg tcgcgctcga
      481 gtggggcctc gggcgcacgg cggaatgggc gcagcgagcc agccgctgaa agcttcgtgc
      541 ggcatgccgg cgtgccgccg agcgcgggcg cggcttgccg gttagcgtat tgccgtagca
      601 gaccacctcg actacggatt ctcgccgtgc tgcgcccatt agcccaaaag ctcgccgctc
      661 gggcgagctc ggagctccgc gcggccaagg cggcgctgcc gcgtgcactg agcgccgtgc
      721 gcgagcagct cgtcgcgatg cggcgctatc gctggctcga ttggctgcag ctcgcgagcg
      781 ccgtcctcgt gacggcggtc ttcgtcctct ggtttcgcga ctggtaccac ggcaacgtcc
      841 ccgcgctctg ggatcccaaa attcagccgg acgacgcgcg caccgcgatc ttcccgtttc
      901 atcgctacga agccggcgcg ccgctctcga ccgatccgat cgcgaccgag atgctcgaat
      961 accagccgta cggctaccgg ctgatctttc ggctgtgcgt gccgctggtg ggcgtgcttt
     1021 tcacgaccaa gatcgttcag gcgctgctgt tcggtctcat cgcctacgcc ggtgtcgtgc
     1081 tcgttcgcag ccctcgcgcc ggtctcggcg cggggctctt gctcattttc tttttctttc
     1141 acgatcagta cgtccaaaac cgcgtgctcg gcgggctgcc acgcggcttc ggctttccgc
     1201 tcgcgacgct gtggctcgcc ggcgccatcg ccgagcgcgc gaacgtgcgc cgcgccgccg
     1261 cgctgctcgc ggcgctcacg tacccgacgg cgctcgcgat ggtgctcgcg gccgaaggcc
     1321 tcttcgtcgt gcggcgcttc ggctttccga gctttcgcac ggcgtggcgg cgtttgcgtc
     1381 actacgtcct gctcgtgctc gcctgcggcg tcttgctcgc gccggccgtc gtcgtcggca
     1441 tgtcgcaggg cggcccgatc cacaccctcg agcaggccaa gcgcgagccc gcgttccaag
     1501 gacggctgcg cgtgctgccg ttcggcgatc ccggcaagga attcggagtg gtcttgagcg
     1561 aggtgtacag ccactatcgc gaaggcgact cgccgtttcc gaacttcaag tcgcacgtcg
     1621 acgagtacga gcacgaggtc ggcgtgacga tgctcgcgct gttcttgatc ttgcccctga
     1681 tgggctggtc gatgggtctc ggcagtgtcg cgcggtttct cgcggcgaac ctcgtgctct
     1741 acgcgctgtc gcgctttttc gcgtttcgac tgtactcccc ggagcgcttc tacagcgtcg
     1801 gcatgcgctc ggtcgcgctc gcgctcgcgg cgagctcgct cggtctcgtg ggccccggcc
     1861 tgccgacgca ctggcgctcg atcgcgcgta atctgacgag cgcggtggcg ctcgcgttcg
     1921 tttggttcgg gatcggcaac ggcgtgcggg ttcccgcgat gggcgcgacc atcgactacc
     1981 gcaacgaagc gccgctctgg gatttcattc gcgggctgcc gccggacacc cgcgtcgcct
     2041 cccacatcat ggatggcgac gagatcccgc tctttacggc gcgcgccacg aacggcaccg
     2101 ccgagacgct ccagccctgg ctcacgctct cgtggcagcg tcaaaaggcg cgcgccgagg
     2161 acacgctccg cgccatgtac gcgacggacc gggacgacgt gctcgcgttc gcgcacaagt
     2221 atcggatcac gcacctgctc gtgaacaaga accgctacaa ggacgatttt cgagcgcgcg
     2281 ccaagagctt cgagccgttc acctcgttca cgaatcggct cttgtccggc gcgtcagccg
     2341 acaatttcgt gctggcctcg ccgccggccg acgcgatcgt ctttcgcttt catcagtggc
     2401 agctgattga cgtggcgaag ctcgaagcgg attgggagca cgcttcgtag cgcgtcagcc
     2461 gagcttcaac gcgtgagtgc ggctcagcgc ttcggcgcca cggcgatgta cgcctcgagc
     2521 tcgcgtggac cctggtacac gttctcgtag ccgcgttcgg cgagataacg cgggaaacga
     2581 cccgtgctga agacgacgtc cggacggcgg gcagcgcacg ccgcgggcat gtcgtcggcg
     2641 tggtcgatga tgtagcccgg atcgaggcgc acaccgtgga tcccgcgctg ctgtttgtcg
     2701 tcggggacgc acgcgaggat gtcgcgcgtc gtgatcgcga acagatcgat gaatttgagc
     2761 gcgccgaagt gctggccgaa agcgtaatac ggcaccatgc cggcttggcc ggacatcacg
     2821 tacagcgggt gagcgggtga gggcgcgagg cgagtgagcg tgtcgagtag gacgccgagc
     2881 agcctggcgt cgcggcggtg cgctttgttg ccgaactcgg tgaacgcgaa gtcgggtttg
     2941 gcgggaccga cgagtgcgtc ttcgccgtcg tgcgccgctt cgcctgaaaa actgccgttt
     3001 tcgcgtgaat tgccgaattt gagctcgctc ctcacgttga cgaagacgag cagcgcgagc
     3061 gcggcccagc cggccggcgc cgattgggcg gcgaagcgcg cgacggcgaa cgcggcgagc
     3121 gccgaaagtg cggggagcat cggcgcgacg aggcgtccgg cgggcatcca gtcgccgccg
     3181 ctcgagacga cgaagcttgc catggcgagc gtccaggcga cgagcaaggg gccgcggctc
     3241 gacgtcttcg tggcgagcgc ttcgcgcaag cagagcgcgg cgccgaggac gcccgcgaca
     3301 gcgagcaggt aactggtctt gccgaacgtt ttgtagaggt aggtcgcccc tgccgagagc
     3361 tcgaagccgc ccaccttggc tgcggcggag ttcggcacga acgcgtgaaa cacg
//
LOCUS       DATIML010000511         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2120560, whole genome shotgun sequence.
ACCESSION   DATIML010000511 DATIML010000000
VERSION     DATIML010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2120560"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VLJ38_08870"
     CDS             complement(<1..390)
                     /locus_tag="VLJ38_08870"
                     /inference="COORDINATES: protein motif:HMM:NF037970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HSU39668.1"
                     /translation="MVDSSPVTPSLPSPRPPTPSSLPPEGALRGGFARNVLPALVWAI
                     AIFVGGSSGVPQPHIDVGLPTDKVNHVGAFLGLQLLSYRALRYALPQRRRVSLRWLAV
                     LVAVLVGVALELYQLGLPDRSADVEDVM"
     gene            complement(383..1639)
                     /locus_tag="VLJ38_08875"
     CDS             complement(383..1639)
                     /locus_tag="VLJ38_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU39669.1"
                     /translation="MTAAPARAPQEPLTPYQRRLFGFLGVATFFEGYDFFALTQVLPS
                     IRTAFALDRAQAGYLVGAINLGTLLAYLLVSRADRWGRRRVLSVTILGYALFTFLSGL
                     APNVWVFCAFQLVARVFLIGEWATSMVIAAEEFPAARRGMVLGVISAASSLGAVICAG
                     IVPLVTKLASWRAVYLVGVVPLLLMAWARRDLRETKRFEASGAEPQRPLLAIFGTPYR
                     RRVLELAVIWFFTYVCTQNAVTFWKDYALRELHLTDSAAAVVVTLGAVVSMPLVFFAG
                     KLFDVIGRKPGAVFVYATVLAGVLGVYFFETRAWLTLAMIVAMFGLSAVLTLLNTMTT
                     ELFPTELRGDAFVWSNNLLGRIGYVASPFVLGELARDRGWGPVLRGSVVFPALALVLL
                     LLWLPETRGRELEQTASVEEAEATRG"
     gene            complement(1636..2430)
                     /locus_tag="VLJ38_08880"
     CDS             complement(1636..2430)
                     /locus_tag="VLJ38_08880"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HSU39670.1"
                     /translation="MTTPADDQNDPLVVGTHRFRSRLFVGTGKYANVEETRAALEASG
                     AEVVTVALRRIDLADRSEGSLGKLLLGGRYTILPNTAGCYTADEAVRTLRLARELGVA
                     SIVKLEVIGDPKTLYPDNEQTLEAAKLLVKEGFTVLPYCMDDPIVCRKLEDIGCAAVM
                     PLAAPIGSGLGIRNPYNLRIILEHAKVPVIVDAGVGTASDAAIAMELGCHGVLLNTAI
                     AQAKNPVLMAHAMREAISAGRRAFLAGRMPRRLYASASSPESGLIE"
BASE COUNT          443 a          791 c          865 g          331 t
ORIGIN      
        1 catcacgtct tcgacgtccg ccgagcggtc gggcaggccg agctgataga gctcgagcgc
       61 gaccccgacg agcaccgcga cgagcacggc gagccagcgt agcgagacgc gccggcgttg
      121 cgggagcgca taacggagcg cgcggtagct caagagctga agtccgagaa acgcgccgac
      181 gtgattgacc ttgtcggtcg gcaagccgac gtcgatgtgc ggctgcggca cgccgctgct
      241 gccaccgacg aaaatcgcga tggcccagac caaggcaggc agcacgttgc gcgcgaagcc
      301 gccccggagc gcgccttccg gtggcaagct cgacggggtg ggcggacgcg gcgacggcaa
      361 gctcggcgtg accggcgatg aatcaaccac gcgtcgcttc cgcttcttcg acgctcgccg
      421 tctgctcgag ctcgcggccg cgtgtttccg gcagccaaag caggagcagg acgagcgcga
      481 gcgccgggaa gacgacgctg ccccggagca ccggacccca gccgcgatcg cgcgcgagct
      541 cgccgagcac gaagggggag gcgacgtagc cgatgcggcc gagcaggttg ttcgaccaga
      601 cgaacgcgtc gccgcggagc tcggtcggaa agagctcggt cgtcatggtg ttgaggagcg
      661 tgagcacggc ggagagcccg aacatcgcga cgatcatggc cagcgtgagc caagcgcgag
      721 tctcgaagaa gtagacgccg agcacgccgg cgagcaccgt ggcgtagacg aacacggcgc
      781 ccggcttgcg cccgatcacg tcgaagagct tccccgcgaa gaagacgagc ggcatcgaga
      841 cgacggcgcc gagcgtcacg acgaccgccg cggcgctgtc ggtgaggtgc agctcgcgta
      901 acgcgtaatc tttccagaag gtgacggcgt tttgggtgca gacgtaggtg aaaaaccaaa
      961 tcacggcgag ctcgagcacg cggcgacgat agggcgtgcc gaaaatagcg aggagcggcc
     1021 gctgcggctc cgctccgctc gcttcgaagc gcttggtttc tcgtagatcg cggcgcgccc
     1081 aggccatgag caagagcggc acgacgccca cgagatacac ggcgcgccaa ctcgcgagct
     1141 tggtgacgag gggcacgatc ccggcgcaaa tcacggcgcc gagactcgac gccgcgctga
     1201 tcacgccgag caccatcccg cgtcgcgccg ccggaaattc ctcggccgcg atcaccatgc
     1261 tcgtcgccca ctcgccgatc aagaagacgc gcgccaccag ctggaacgcg cagaagaccc
     1321 agacgttcgg cgcaaggccc gacaggaacg tgaagagcgc gtagccgagg atcgtcacgg
     1381 acaagacgcg ccttcggccc cagcgatcgg cgcggctcac gagcaggtac gcgagcaggg
     1441 tgcccagatt gatggcaccg acgaggtatc ccgcttgggc gcgatcgagc gcgaacgcgg
     1501 tgcggatgct cggcagcacc tgcgtgagcg cgaagaaatc gtagccctcg aagaaggtcg
     1561 cgacgccgag gaagccgaac aggcggcgct gatagggcgt gagcggctct tggggcgccc
     1621 gcgccggcgc cgccgtcatt cgatgagccc gctctcggga ctcgaggcgc tcgcgtacag
     1681 gcggcgcggc atgcgacccg ccaagaacgc gcggcgaccg gcgctgatgg cctcacgcat
     1741 ggcgtgcgcc atgagcaccg ggttcttcgc ctgcgcaatg gccgtattca agagcacgcc
     1801 gtgacagccg agctccatcg cgatcgcagc gtcgctggcc gttcccaccc cggcgtcgac
     1861 gatcacgggc actttggcgt gttcgagaat gatgcggaga ttgtacgggt ttctgatgcc
     1921 gaggcccgag ccgatgggcg cggcgagcgg catcacggcg gcgcagccga tgtcttcgag
     1981 cttcctgcag acgatgggat cgtccatgca gtagggcagg accgtgaagc cctctttgac
     2041 gagcagcttc gcggcttcga gcgtctgctc gttgtcgggg tagagcgtct tcgggtcgcc
     2101 gatgacttcg agcttcacga tgctcgcgac gccgagctcg cgcgcgagcc tgagcgtgcg
     2161 caccgcttcg tcggcggtgt aacagccggc cgtgttcggc aaaatcgtgt agcgcccgcc
     2221 gagtagcagc ttgccgagcg agccttcgct ccggtcggcg aggtcgatgc gccggagcgc
     2281 cacggtgacg acctcggcgc ccgaggcctc gagcgcggcg cgcgtctcct cgacgttcgc
     2341 gtacttgccc gtgccgacga agagtcgcga gcggaagcgg tgcgtcccga cgacgagcgg
     2401 atcgttttgg tcgtcagcag gcgtggtcac
//
LOCUS       DATIML010000512         2737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2988607, whole genome shotgun sequence.
ACCESSION   DATIML010000512 DATIML010000000
VERSION     DATIML010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2988607"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..788
                     /locus_tag="VLJ38_08885"
     CDS             <1..788
                     /locus_tag="VLJ38_08885"
                     /inference="COORDINATES: protein motif:HMM:NF025594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4336 domain-containing protein"
                     /protein_id="HSU39671.1"
                     /translation="SHVTKRRAASSLTRWLSGVHRRRGVCRRMSMSALTEVVADKIWT
                     FDRPVWFSGIRQRARTTVVRLEGGSLLVHSPAPPTDALAEQLGTLGPVRWLLVPNCFH
                     HLGTPAAAARFPQAQVVGPASALKRNKALTLNADIHDAGFGAQLPEFELLPLFGVPFL
                     DETVLYHRPTQTLLGADIVLCAGVKDHWTCRFAARLTGFYEQVRVPPDVRMTKLDKTA
                     VARSIQAMLERPIQRLIVGHADVIQEGCRDLLASAWRREGVEV"
     gene            complement(850..1119)
                     /locus_tag="VLJ38_08890"
     CDS             complement(850..1119)
                     /locus_tag="VLJ38_08890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HSU39672.1"
                     /translation="MCRNIRPLFNFEPPATDDECRAAALQFVRKVSGTRQPSDKNHDA
                     FDRAVEQIFAVTRELVDSLETSAPPKNREEEAAKARARSAARYGD"
     gene            complement(1140..2108)
                     /locus_tag="VLJ38_08895"
     CDS             complement(1140..2108)
                     /locus_tag="VLJ38_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit"
                     /protein_id="HSU39673.1"
                     /translation="MPFAAVLGQEPAVATLERALASGRAHHAYRFEGPPGVGKELAAF
                     ALAQALVCERGNGCGECSACRRAVTLSEDDPRVPQHPDVVLLGRGLYRGLLGSNSGEA
                     TGISVEQVRRIVLARVGFPPHEGRALVFIVREADEITTQAANALLKTLEEPHEKTHFI
                     LLTSRPSRLLDTIRSRSLPVRFGPLPDRIIASILEKRGLDPSVAPLAQGSASLALELA
                     DPEEKQERDAFVEAAFNALTAPDLAPALKLAEGQKKDRDGLKAQLTFFGQAVAAQARA
                     AVAADAKTALARAFQHRTVLEAIDALERNVQPALALEAMFVRLRGG"
     gene            2161..>2737
                     /locus_tag="VLJ38_08900"
     CDS             2161..>2737
                     /locus_tag="VLJ38_08900"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSU39674.1"
                     /translation="MAARAMPHVEDLLRPELADIKPYLPTAGEFRIRLDANEAPPLFG
                     PEVGARLAEAFAHVKLERYPDATSGELRAAVAARLGVEPEEVLLGVGSDEIITFLLTA
                     FARPRRGSEPPAILTTTPTFVMYRLSARLRGERVIEVPLDADWDLAEESLLRGIDVSE
                     PHLIFIASPNNPTGTMATRSRLERVIESAERS"
BASE COUNT          416 a          887 c          970 g          464 t
ORIGIN      
        1 gcagccatgt cacaaaaagg agagccgcct cgtccctgac gcgatggttg agcggtgtcc
       61 atcgccgccg aggagtctgc cgccgcatgt ccatgagcgc tctcaccgaa gtcgttgctg
      121 acaagatctg gacgttcgac cgccccgtgt ggttcagcgg tatacggcag cgcgcccgca
      181 ccacggtcgt acgcctcgag ggcggcagct tactcgtgca cagcccggcg cctcccaccg
      241 acgcgctggc cgagcagcta ggaaccctgg ggccggtgcg ctggctcttg gtgccgaact
      301 gctttcatca tcttggaaca ccggcagcgg cagctcgatt tccccaagcg caggtcgtgg
      361 gaccggcgtc ggcgctcaag aggaacaagg ctttgacact gaacgcggac atccatgacg
      421 ccgggttcgg cgcgcagctt ccggaattcg agctgttgcc acttttcggc gtcccgtttc
      481 tcgacgagac agtgctctac caccggccga cgcaaaccct gctcggcgcc gacatcgtcc
      541 tttgcgccgg cgtgaaggat cactggacct gtcgttttgc cgcgcgcctg accggctttt
      601 acgagcaggt gcgcgtgcct ccagacgtca gaatgacgaa gctggacaag acggcggtgg
      661 cgcgttccat ccaggccatg ctggagcgac ccatccaacg tctcatcgtc ggacatgccg
      721 acgtcatcca agagggttgc cgcgatctgc tcgcaagtgc ctggcgacgg gagggtgtgg
      781 aggtgtgagt cgccgccgat tgaccgcgac gagcacactc atgcggcatc gccgccacac
      841 tttcggcatt caatcgccgt agcgagcggc ggagcgggcg cgagctttcg ccgcttcttc
      901 ttcgcggttc ttgggcggcg cgctggtttc gagggagtcc acgagctcgc gcgtgacggc
      961 gaagatttgc tcgacggcgc ggtcgaaggc gtcgtggttt ttgtcgctcg gttggcgggt
     1021 gccgctcacc ttgcggacga attggagcgc cgcggcacgg cattcgtcgt ccgtcgccgg
     1081 cggctcgaag ttgaatagcg gacggatgtt ccggcacatg accggaggat accgccgctt
     1141 tagccgccgc gtagccgtac gaacatggct tcgagcgcaa gcgccggctg gacgttgcgt
     1201 tcgagggcgt cgatggcttc gagcacggtg cggtgttgaa aggcgcgcgc gagggcggtc
     1261 ttggcgtcgg ccgcgaccgc cgcgcgcgct tgggccgcca cggcctgccc aaagaaggtg
     1321 agctgggctt tgaggccgtc gcggtctttc ttctggcctt cggcgagctt gagcgcgggc
     1381 gcgaggtcgg gcgcggtcag cgcgttgaag gcggcttcga cgaaggcgtc acgctcttgc
     1441 ttttcttccg ggtcggcaag ctcgagcgcg agcgaggcgc tgccttgggc gaggggcgcg
     1501 acgctcggat cgaggccgcg cttttcgagg atgctggcga tgatgcgatc ggggagtggc
     1561 ccgaagcgca cgggcagcga gcgggagcgg atggtgtcga gcaggcggct cgggcggctc
     1621 gtgagcagga tgaagtgcgt tttttcgtgc ggctcttcga gggtcttcaa gagcgcgttg
     1681 gccgcctgcg tggtgatttc gtcggcctca cgcacgatga agacgagcgc gcggccctcg
     1741 tgcggcggga acccgacgcg cgcgaggacg atccggcgca cttgttcgac gctgatgccc
     1801 gtcgcttcgc cggagttcga cccgagcagg ccgcgataca agccgcgccc gagcagcacg
     1861 acatcgggat gctgggggac gcgcggatcg tcctcgctca gtgtcacggc gcgccggcac
     1921 gcgctgcact cgccgcaacc gttgccccgc tcgcacacga gcgcttgagc gagtgcgaac
     1981 gccgcgagct ctttgcccac tccgggcggg ccctcgaagc gataggcgtg gtgcgcgcgg
     2041 ccgctcgcga gcgcgcgctc gagcgtggcg acggccggct cttgtcccaa aaccgcggcg
     2101 aaaggcactg cccgcccgcg tagcaccacc tggtgccggc cgcgaaaaga agtgtgatac
     2161 ttggccgctc gagccatgcc gcacgtcgag gacctgcttc gtcccgagct cgccgacatc
     2221 aagccgtacc tgccgacggc cggtgagttt cgcattcgac tcgacgccaa cgaggcgccg
     2281 cccctgttcg ggcccgaggt gggcgcgcgc ctggccgagg cctttgcgca cgtgaagctc
     2341 gagcgctacc cggacgcgac ttcaggcgag ctccgggccg cggtcgcagc gcggctcggc
     2401 gtggaaccgg aggaagtgct gctcggggtc ggcagcgacg agatcatcac gtttcttttg
     2461 acggcgttcg cgcgtccgcg tcgcggcagc gagccgccgg ccatcctcac gacgacgccg
     2521 acgttcgtga tgtaccggct gagcgcgcgg ctgcgcggcg agcgggtgat cgaggtgccg
     2581 ctcgacgccg attgggacct cgccgaggag agcctgctgc gcggcatcga cgtgagcgag
     2641 ccgcacctga tcttcatcgc gagtccgaac aatccgacag gcaccatggc gacgcggagc
     2701 cgcctcgagc gcgtgatcga aagcgccgaa cgctcgc
//
LOCUS       DATIML010000513         2662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3277496, whole genome shotgun sequence.
ACCESSION   DATIML010000513 DATIML010000000
VERSION     DATIML010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3277496"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..922
                     /gene="der"
                     /locus_tag="VLJ38_08905"
     CDS             <1..922
                     /gene="der"
                     /locus_tag="VLJ38_08905"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HSU39675.1"
                     /translation="PELVAVSALHGRGTAELAAAIAGVLPPFAPSDEASADGIPRVAL
                     IGKPNAGKSSLFNRLAGEERALVDERPGTTRDPVDQRINFAGRTFIVVDTAGIRRRAR
                     VERGIELVSVMRSIRALERADVAVLMADASEGVSEQDARLVGLATDRRRALIVALNKM
                     DTLGKAERAAAVDKARTDLAFARWAPILSISAKTGLGVNELMQKVGKASDELKRRVST
                     SELNRFFRSVLERQPPPTQGGRAPRIYYLTQAESSPPLFIAWASFPERIKESYKRFVE
                     NQIRTAFGFDSVPVTVHYRARERRKHPGEA"
     gene            complement(929..2074)
                     /locus_tag="VLJ38_08910"
     CDS             complement(929..2074)
                     /locus_tag="VLJ38_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsA-related P-loop ATPase"
                     /protein_id="HSU39676.1"
                     /translation="MAEGPTLLSLVESRRVLVCAGAGGVGKTTVAAALAIGAARRGKR
                     VLCLTIDPAKRLADSLGLHGMRGEVHAIDPARLAELGVPPGGSLTVSMLDTKRTFDDI
                     VARHAPNEVVRDRILGNRFYQYVSTHLAGTQSYMAMEKVLAVLGDPSFDLLVLDTPPT
                     SDALDFLDAPERLIEALDSPAMRWLVDAFEPQRKLGLGVLARGVARVLRGVGRLTGQG
                     FLENMAEFVTELNDLFGGFKQRARQVAAAFRGTDFAYVLVSTPVPAALEEAALFLERL
                     AAQGLAGDALVLNRLHPRATADVSLEDAARAASRHGLAPSLAGALVAALRDEEVQGKA
                     DASALAAFEARFGPNGRARPRFQIELPLLAGDAHDLGAMAPLVSRLV"
     gene            2191..2583
                     /locus_tag="VLJ38_08915"
     CDS             2191..2583
                     /locus_tag="VLJ38_08915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39677.1"
                     /translation="MDAASSAPASDRRLDRTSDALGALTKLVEASRRRAGLTAVAVTD
                     STGLLLAGAGARTLCEELAAWAPIVGRHPDNDTVPSCLDAFEGQTRLRRVAIDGFEIV
                     VSFCGPSTGTTSELDAVSAGCLRILRQP"
BASE COUNT          412 a          947 c          921 g          382 t
ORIGIN      
        1 tccggagctc gtcgccgtct cggcgctgca cgggcgcggc acggccgagc tcgccgcggc
       61 gattgccggc gtcttgccgc cgttcgcgcc ctccgacgaa gcgagcgccg acggcatccc
      121 gcgcgtcgcg ttgatcggca agccgaacgc cgggaaatcc tcgctcttca atcgattggc
      181 cggggaggag cgcgcgctcg tcgacgagcg gcccggcacg acgcgcgacc ccgtggacca
      241 gcgcatcaac ttcgctgggc ggacgttcat cgtcgtcgac acggcgggca ttcgccgccg
      301 cgcgcgcgtc gaacgcggca tcgagctcgt gagcgtcatg cgctcgattc gcgcgctcga
      361 acgcgccgac gtggccgtgc tgatggcgga cgcgagcgag ggcgtctccg aacaagacgc
      421 gcggctcgtc gggctcgcga ccgaccgccg gcgggcgctg atcgtcgcgc tgaacaagat
      481 ggacacgctc ggcaaagccg aacgggcggc ggccgtcgac aaagcgcgca ccgatctcgc
      541 gttcgcccgc tgggcgccca tcctctccat cagcgccaag accggccttg gcgtgaacga
      601 gctcatgcag aaggtcggta aagcctccga cgagctcaag cgccgcgtct cgacctcgga
      661 gctgaatcgc ttcttccgca gcgtgctcga gcgccagccg ccgccgaccc aaggcggccg
      721 cgcgccgcgc atctattacc tcacgcaagc cgagagctcg ccgccgctgt tcatcgcctg
      781 ggcgagtttc ccggagcgga tcaaggagag ctacaagcgc ttcgtcgaga accagatccg
      841 gacggcgttc ggcttcgact cggtgcccgt caccgtgcac taccgcgcgc gcgaacggcg
      901 caagcacccg ggcgaggcgt agaacggctc aaaccaggcg gctcacgagc ggcgccatgg
      961 cgcctagatc gtgggcatca cccgcgagta gcggcagctc gatctgaaag cgcggccggg
     1021 cgcggccgtt cggcccgaag cgggcctcga acgcggcgag tgcgctcgcg tcggctttgc
     1081 cctgcacttc ttcgtcccga agcgctgcga cgagcgcgcc cgcgagggac ggcgcgaggc
     1141 cgtggcgcga cgccgcacgc gccgcgtcct cgagcgagac gtccgcggtc gcgcgcgggt
     1201 gcaggcgatt caagacgagc gcgtcgcccg cgagcccctg cgctgccagg cgctcgagaa
     1261 agagcgcggc ctcctcgagc gcggcgggga ctggtgtcga gacgagcacg tacgcgaaat
     1321 ccgtgccgcg aaaagccgcc gccacttggc gcgcgcgctg tttgaagccg ccgaacagat
     1381 cgttgagctc ggtcacgaac tccgccatgt tctcgaggaa gccttggccc gtgaggcgcc
     1441 ctacgccacg cagcacgcgc gcgacgccgc gcgcgagtac gccgaggccg agcttgcgct
     1501 gcggctcgaa cgcgtccacg agccagcgca tggcggggct gtcgagcgct tcgatcagcc
     1561 gctcgggcgc gtcgaggaag tcgagcgcgt cgctcgtcgg cggcgtgtcg agcacgagca
     1621 agtcgaacga cggatcgccg aggacggcga gcaccttctc catcgccatg tacgactgcg
     1681 ttcccgcgag gtgcgtcgac acgtactggt agaatcgatt gccgaggatg cgatcacgca
     1741 cgacctcgtt cggggcgtgg cgcgcgacga tgtcgtcgaa ggtgcgcttg gtatcgagca
     1801 tcgagacggt gagcgagccg ccgggcggga cgccgagctc ggccaggcgc gcgggatcga
     1861 tagcgtgcac ttccccgcgc atgccgtgca gacccaagct gtcggcgagt cgcttggccg
     1921 gatcgatcgt caggcagagc acgcgcttgc cgcgccgcgc cgcaccgatg gcgagggccg
     1981 cggcgacggt ggtctttccg accccgcccg ccccggcgca gacgagcacg cggcgactct
     2041 ccacgagcga gagcaacgtc gggccttcgg ccattgagcc agctcttagc attagattcc
     2101 ctgaagagcc gtcctttcgc cgaaggtcgc acggcggttg ctagcgacaa agtttgccca
     2161 ctgagctcga gcgcgcgacg ctgccacacg atggacgctg ctagctcggc cccggcctcc
     2221 gaccgccgtc tcgaccgcac ctcggacgcg ctcggcgcac tcaccaagct cgtcgaagcc
     2281 tctcgccgtc gcgcaggcct cacggccgta gccgtgaccg actcgacggg cctcctgttg
     2341 gcaggagccg gcgcccgaac gctttgcgaa gaactcgcgg cctgggcgcc cattgtcggg
     2401 cgtcaccccg acaacgacac cgtcccgagc tgcctcgatg cgttcgaggg ccagacgcgc
     2461 ctccggcggg tggccatcga cggcttcgaa atcgtcgtga gcttttgcgg gccgagcacc
     2521 ggcaccacga gcgagctgga tgcggtgtcg gcgggttgtt tgcgtattct ccggcaaccc
     2581 tgagcctgag ctcccggccc cacacgcgtg ccccgggggc tgctagggtt cgccgccgtg
     2641 cgcggtttca tcgatctgca tt
//
LOCUS       DATIML010000514         6251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4724707, whole genome shotgun sequence.
ACCESSION   DATIML010000514 DATIML010000000
VERSION     DATIML010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6251
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4724707"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VLJ38_08920"
     CDS             complement(<1..380)
                     /locus_tag="VLJ38_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39678.1"
                     /translation="MTSARPNPVWAELVQLVPIVSLALPIILAGKIDFARAGTPLLVA
                     ALLTIPVSAVVVLRHAALNPILVGTALWLWLAALGFELGSPGLVAALSEAQGAGLFLA
                     VVAVGFVATLLSPQGFVGTIHPDRA"
     gene            468..833
                     /locus_tag="VLJ38_08925"
     CDS             468..833
                     /locus_tag="VLJ38_08925"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU39679.1"
                     /translation="MKNAINHFEIPVTDMERAVRCYETLLGQRLRRETFGGLPYALFP
                     HEEPGVSGALVCDPKRSTGGGTLVYLNADGQLDAILARAEQAGASVSVPKTAIGPEGF
                     IALVRDTEGNHVGFNEQVT"
     gene            901..1602
                     /locus_tag="VLJ38_08930"
     CDS             901..1602
                     /locus_tag="VLJ38_08930"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HSU39680.1"
                     /translation="MPRADRLLRLVQLLRRYRAPVSAAVLAQELEVSVRSVYRDVDTL
                     RDQGAEIEGEAGLGYVLKPGFLLPPLMFSDEELEAITLGLRLTAEHGDAALERAAAEV
                     VAKLRAVLPKDLQALVSGTGLLAGPARARPRESIDLAEVRRALRIERKVRLEYTDQRG
                     HASARVVWPVALGFFERSRVLVAWCETRADFRSFRVDRIARFTLLGSGFPKTRASLLR
                     TWRERERIPAQVGAR"
     gene            1756..3024
                     /locus_tag="VLJ38_08935"
     CDS             1756..3024
                     /locus_tag="VLJ38_08935"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU39681.1"
                     /translation="MNGTKSDLIVVGAGIAGLYAARRLARAGARVTVLEGRSQPGGRI
                     LTERPDRSVSPVELGAEFVHGRSPELHHLIEEAGLELERVEGEHYELDAGEVRPAKVL
                     GEVLDAIGHPGAGDTGTALDLAKERHFGREQTRWLTHFVEGFHAAPPDRVSARSIVRQ
                     AASTESQARCRQGYGALIDFLCAELVNAGAILGFGSRVESVVVKPHGVIVRDQWREHH
                     AGACIVALPLPMHHAPRELGGVELDPAPDAVTAASRRLESGLALRVTLRLGEPAEFQR
                     ALPHGSFIHVLDEEFPTWWSGSDRDESRLVAWCGGPRCARLAGERRASAAALEALGHI
                     TGKTVPELRALVREVHVHDFGVDRFSRGAYPYELAAETDGDLPLVAGRAPLLVAGDFF
                     DADEVGTVSAAVKSGHAAASVLLGEERHAS"
     gene            3205..5454
                     /gene="thrS"
                     /locus_tag="VLJ38_08940"
     CDS             3205..5454
                     /gene="thrS"
                     /locus_tag="VLJ38_08940"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HSU39682.1"
                     /translation="MSISVILPDGKQLALERGATPLDAARAISTKLADVVVVAKVDGQ
                     IWDLRQPLTDGSRLELFKADSPEGRDAINHSAEHVLATAVLHLFPGAKVTMGPRSHAE
                     EFYYDFDVGNHTFSPDDLARIQAEMQRLIESKLAFERQSVPRAQARDVLRSLGQDNEY
                     KDEILSWIRDDEVSLFRNGDFIDLCRGPHLPHAGFIKGLKLTAASAAYWRADSTKQSL
                     QRVRGVAFAKQGELEKYERTLEEAKKRDHRKIGRDLELFLVSERYDDHDYQEQEELDL
                     YVGVTAPTPLDRGLVEFVLTHVSRCVGPRQVRQTVKLAPLPRAKAGEVVEPSVEVRLR
                     GALSAGVRRELEAALADCKEARLNLYVEPHYTEEVGPGLVMWLPKGGRLRAIIEDQWR
                     KLHLEAGYDLVYSPHIAKADLWKVSGHWNFYRDGMFSPMSVDGHDYCCKPMNCPFHVL
                     MVKSRNRSYREFPMRLAELGTVYRYELAGVMHGLMRVRGFTQDDAHLFCRADQVEEEV
                     DRVLRFILRTLRIFGFNSFEVNLSTRPAEYVGTPEGWERAERTLAQALERVGLAYEID
                     AGGGAFYGPKIDIKLVDALERKWQCSTLQYDFNNPERFTLEFVNSKGEREQPIMLHRA
                     LLGSIERFIGVLLEHYAGALPAWLSPEQARVITVAERHGEHARRIAELLQRTGVRTSV
                     EASSDKLGAKIRQAQLEKIPFMLVIGDKEVEGDGAAVRLRDGTDKGLMASEALSSFLC
                     DGCAIPDVA"
     gene            complement(5390..>6251)
                     /locus_tag="VLJ38_08945"
     CDS             complement(5390..>6251)
                     /locus_tag="VLJ38_08945"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HSU39683.1"
                     /translation="RDASWWCIAVVAYLFGAVVNHALLLAIHELSHGLAFRRPSHNRV
                     FGVFVNLPLGIPVSENFRYYHLLHHAYQGDRRRDVDLPTKFESRLLRSKLGRLLWLLG
                     QALAYTVRPLLVHPKKPSAAELLQFAVQLVFNLALIHCWGAKAFAFLPLSSLLGMGPH
                     PVAGHYVTEHHAFRADQHTYSYYGPLNRLTWNIGYHNEHHDFPYIPGSRLAEVRRLAP
                     EFYARLLHHDSRIGTLWRFLRGRTPNAPRRALALGSVAEPGFGPRVKLRRRRGSRSRR
                     RGSSTTPLTP"
BASE COUNT         1069 a         1962 c         2153 g         1067 t
ORIGIN      
        1 gctcgatcgg ggtgaatcgt gccgacgaaa ccctgggggg acaacagtgt tgcgacgaag
       61 ccgaccgcaa cgacggctaa gaagagcccc gcgccttgag cttcgctcag cgctgcgacg
      121 agacccggcg agccgagctc gaacccaagc gcggcgagcc acagccagag cgccgtcccg
      181 accaggatcg ggttcagcgc cgcgtgccgc agaacgacca cagccgagac gggaatggtc
      241 aagagcgcgg caacgagcaa cggcgttcct gcccgcgcaa agtcgatttt gcccgccaag
      301 atgatcggca gagcgaggct cacgatcggc acgagctgaa cgagctcggc ccagacgggg
      361 ttcgggcggg cgctggtcac ggtccgcgca gcatagcgtg agcgcgcggt cgtcggctcc
      421 ttcactactg ccagaaactg acagtacgtc ctggcacgct cggaaccatg aagaacgcga
      481 tcaaccactt cgaaatcccg gtcaccgaca tggaacgcgc cgtgcgctgc tacgaaacgc
      541 tgctgggcca gcggctgcgc cgcgagactt tcggcggctt gccgtacgcc ctctttccgc
      601 acgaagagcc cggcgtgagc ggcgcgctcg tctgcgatcc gaagcgctcg acaggaggcg
      661 gcacactcgt ctacttgaac gccgacggcc agctcgacgc catcttggcg cgcgccgagc
      721 aggcgggagc gagcgtcagc gtgccgaaga cggccattgg gcccgaaggc ttcatcgcgc
      781 tcgtgcggga caccgaaggc aatcacgtcg gcttcaacga gcaggtgact tgagtgcgcg
      841 ctccggtcgc tgctgtaatg cgccggcgct cgtgctgaca aattatggca acataagacc
      901 atgccgcgcg ccgatcgctt gctccggctc gttcagctcc tgcgcaggta tcgcgctccg
      961 gtgagcgccg ccgtgttggc gcaggagctc gaggtctccg tgcgctccgt ctaccgcgac
     1021 gtggacacgc tgcgcgacca aggagccgaa atcgaggggg aggcggggct aggctacgtc
     1081 ctcaagccgg gattcttgtt gccgccgctc atgttcagcg atgaggagct cgaggccatt
     1141 acacttggct tgcggctcac cgcagaacac ggcgacgcgg cgctcgaacg cgcagccgcg
     1201 gaagtggtgg ccaagcttcg cgccgtgcta ccgaaggatt tgcaggcgct cgtgagcggc
     1261 actgggctct tggcaggacc tgcgcgcgct cgtccgcgcg aaagcatcga tcttgccgag
     1321 gtgcggcgcg ccctgcgcat cgagcgcaag gtgcggctcg agtacaccga tcagcgcgga
     1381 cacgcgagcg cacgcgtcgt ttggcccgtg gcactcggat ttttcgagcg ctcgcgcgtg
     1441 ctggtcgcct ggtgcgagac gcgggctgat tttcgctctt ttcgcgtcga tcgcatcgcg
     1501 cgcttcacgc tgctcggtag cggcttcccg aagacccgcg cgtcgctctt gcgcacctgg
     1561 cgggaacgcg agcggatccc ggctcaggtc ggcgctcggt gaacgccgcg atgctgctgc
     1621 gcagaactgt cgcggcatgg cattccgcag cactggcgtc tcgagtatcg gccctcaggc
     1681 gtcgctacgc ctggtacggg gattgctcac gcaagccacg tgggtgacgg cgatgtcgga
     1741 cgcaatcggg gcccggtgaa cggaaccaaa tccgacctca tcgtcgtggg tgcgggcatt
     1801 gccgggctct acgccgcgcg tcgcctcgca cgcgccgggg cgcgtgtgac ggtgctcgaa
     1861 gggcgctcgc aacccggcgg gcgtattctg actgagcggc ctgatcggtc cgtgagcccc
     1921 gtcgagctcg gcgcggaatt cgtacatggt cggtcgccgg agctgcacca cctcatcgag
     1981 gaggcgggcc tcgagctcga gcgcgtcgaa ggcgagcatt acgagctcga cgccggcgag
     2041 gtgcgcccgg ccaaggtgct cggcgaagtg ctggacgcga tcgggcaccc aggtgcgggc
     2101 gacacgggta cggcgctcga tctggcgaaa gagcgccatt tcggtcgcga gcagacacgc
     2161 tggttgacgc atttcgtcga aggcttccat gcggcgccgc cggaccgcgt gagcgcgcgg
     2221 tccatcgtgc gacaagctgc gtcgacggag tctcaggcgc gctgccgcca gggctacggc
     2281 gcgctcatcg actttttgtg cgccgagctc gtcaacgcgg gggcgattct cggcttcggt
     2341 tctcgggtag aaagcgtcgt ggtgaagccg cacggcgtga tcgtgcgcga ccagtggcgc
     2401 gaacaccacg cgggcgcttg tatcgtcgca ctgccgctgc cgatgcacca cgcgcccagg
     2461 gagctcggcg gcgtcgagct cgaccctgcg ccagatgcgg taaccgccgc gtcgcgccgc
     2521 ctcgagagcg gcttggcact ccgcgtcaca ctgcgcctcg gcgagccggc cgaattccag
     2581 cgcgcgctgc cgcacggctc gttcattcac gtgctcgacg aggaatttcc gacgtggtgg
     2641 tcgggttccg atcgggacga atcgcggctg gtagcctggt gcggcggccc gcgctgtgcg
     2701 cgcctcgcgg gcgaacgacg ggcctcggca gcggccctcg aggctctcgg acacatcacg
     2761 ggcaagaccg tcccggagct tcgcgccttg gttcgcgaag ttcacgtcca cgatttcggc
     2821 gtggatcgct tctcgcgcgg tgcgtatccc tacgagcttg ccgcggagac ggacggcgat
     2881 ctgccgctcg tcgctggccg ggcgccgctg ctcgtcgctg gcgacttctt cgacgccgac
     2941 gaagtgggca cggtgtccgc cgccgtgaag agcgggcacg cagccgcctc cgtactgctc
     3001 ggtgaagagc ggcacgcgag ctagtctggc gctccaggac tgcgagggtg ctgctaggga
     3061 gctactccgc ctcgccgtgg cgttttgtgg gctggcggtt ttggcgtttt ccccaacctg
     3121 tgagcgggtt gtgggttact cgcgcttccc ccgttggaag aggggcgcta gctttcgcca
     3181 cccctcacgg ttgagcgccc catcatgtca atttcggtca ttctgccaga cggcaagcaa
     3241 ctagcactcg agcgcggcgc aacgcccctg gacgcggcgc gcgctatttc gacgaagctc
     3301 gccgacgtgg tcgtggtcgc gaaggtggac ggacaaattt gggatctgcg tcaaccgttg
     3361 acggacggct ctcgcctcga gctcttcaaa gccgactcgc cggaagggcg cgacgccatc
     3421 aatcattcgg ccgaacacgt gctcgcgacg gcggtgctgc acttgtttcc cggggccaaa
     3481 gtcaccatgg gcccgcgcag ccacgccgag gaattttatt acgacttcga cgtgggcaat
     3541 cacacgttct cgcccgatga tctagcgcgt atccaggcgg agatgcagcg actcatcgag
     3601 agcaagctcg ccttcgagcg gcagagcgtg ccgcgggcgc aagctcggga tgtcctccgc
     3661 tcgcttggtc aggacaacga gtacaaggac gagatcttgt cgtggatccg ggacgacgag
     3721 gtctcgctgt tccgcaacgg cgacttcata gatttgtgtc gcggtccgca tctgccgcac
     3781 gccgggttca tcaaagggct gaagctcacg gccgcttcgg ccgcatactg gcgcgccgac
     3841 tcgacgaagc aatcgctgca gcgcgtgcgt ggcgttgcct ttgcgaagca gggagagctc
     3901 gagaaatacg agcgaaccct ggaggaagcc aaaaagcgcg accaccgcaa aatcggccgg
     3961 gatctggagt tatttttggt gtcggagcgc tacgacgacc acgactacca agagcaagag
     4021 gagctcgatc tctacgtggg cgtgacggct ccgactccgc tcgaccgggg gctcgtcgag
     4081 ttcgtgctga cgcacgtgtc tcgctgtgtc gggccgcgcc aagtgcgtca aaccgtcaag
     4141 ctcgcgccgc tgccgcgcgc gaaagcgggc gaggtggtcg aacccagcgt cgaggtgcgg
     4201 ctgcgcgggg ccttgtcagc gggggtccga cgcgagctcg aagccgcgct cgccgactgc
     4261 aaggaagcgc ggctgaacct gtacgtcgag cctcactaca ccgaggaggt gggtcccggt
     4321 ctcgtgatgt ggctgccgaa gggcggccgg ctcagagcca tcatcgaaga tcagtggcgc
     4381 aagctgcatt tggaggctgg ttacgatctc gtctactcgc cgcacatcgc caaagcggat
     4441 ctgtggaagg tctcgggtca ctggaacttc taccgcgacg gcatgttttc ccccatgtcg
     4501 gtcgatggcc acgactactg ctgtaaaccg atgaattgcc cttttcacgt gctgatggtg
     4561 aagagtcgga accggagcta ccgggagttc ccgatgcggt tggccgagct aggcaccgtt
     4621 taccgttacg agctcgccgg cgtgatgcac ggcttgatgc gcgtgcgcgg cttcactcag
     4681 gacgacgccc acctcttctg tcgcgccgac caagtcgaag aggaggtgga tcgggtgctc
     4741 cgtttcatcc tgcgcacgct gcgcatcttc gggttcaact cgttcgaggt gaatctgtcg
     4801 acgcgaccgg ccgagtacgt cggtacgccg gagggttggg aacgggcgga acgcacgctc
     4861 gcgcaggccc tcgagcgcgt gggactcgcg tacgaaatcg acgcaggcgg cggggccttc
     4921 tacggcccca agatcgacat caagctcgtc gatgcgctcg agcgcaaatg gcagtgttcg
     4981 acgctgcagt acgatttcaa caatcccgag cgcttcacgc tcgaattcgt gaactccaaa
     5041 ggcgagcgcg agcagccgat catgttgcat cgtgcgctgc tcggctcgat cgagcgcttc
     5101 atcggcgtgc tgctcgaaca ctatgcgggg gccttgccgg cgtggctctc acccgagcag
     5161 gcgcgggtga tcaccgtggc cgagcgtcac ggcgagcacg cgcggcgcat cgcggagctc
     5221 ttgcagcgaa cgggcgttcg gaccagcgtc gaagcatcgt cggacaagct cggcgcgaaa
     5281 atccgacaag cgcagctcga gaagatcccg ttcatgctcg tgatcggcga caaagaagtc
     5341 gaaggcgacg gcgcggccgt tcgcctgcgc gacggcacgg ataaggggct catggcgtca
     5401 gaggcgttgt cgagcttcct ctgcgacggc tgcgcgatcc ccgacgtcgc ctgagcttta
     5461 ctcgggggcc gaagccgggt tcggcgacgc tcccgagtgc cagcgctcgg cgcggtgcgt
     5521 tcggcgttcg cccgcggagg aagcgccaca gcgttccgat gcgcgagtcg tgatgcagga
     5581 gccgtgcgta gaattcgggt gcgagtcgcc ggacctccgc cagccgcgag cccgggatat
     5641 aggggaagtc gtggtgttcg ttgtgatagc cgatgttcca cgtgaggcga ttcaatgggc
     5701 catagtagga ataggtgtgt tgatcagcgc gaaatgcgtg gtgctcggtg acgtagtggc
     5761 ccgcaacggg gtggggtccc atgcccagga gcgagctgag cggcaagaat gcgaacgcct
     5821 tcgctcccca gcagtgaatc agcgcaaggt tgaacacgag ttgcaccgcg aattggagga
     5881 gctccgcggc acttggtttt ttcgggtgaa cgaggagggg gcgtacggtg taggccagcg
     5941 cctgccctag cagccagagc agcctcccga gcttgctccg cagcaggcgc gactcgaact
     6001 tcgtcgggag gtcgacgtcg cgtcgcctgt ctccttgata cgcgtgatgg aggaggtgat
     6061 agtagcgaaa gttttcggag acggggatac ccagtggcag attgacgaag accccaaaga
     6121 cacggttgtg cgagggccta cgaaacgcga ggccgtggct gagctcgtgg atcgcgagca
     6181 ggagcgcgtg attgacgacg gccccgaaca ggtaggcgac cacggcgatg caccaccacg
     6241 atgcgtcgcg c
//
LOCUS       DATIML010000515         2257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1836396, whole genome shotgun sequence.
ACCESSION   DATIML010000515 DATIML010000000
VERSION     DATIML010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1836396"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2086
                     /locus_tag="VLJ38_08950"
     CDS             <1..2086
                     /locus_tag="VLJ38_08950"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU39684.1"
                     /translation="VDAAAEHMKAFAQGGWLIELAAISDGESVPAAIASALEIRLVPG
                     QSNAKALASRLRTYDVLLVIDNCEHVVEAVAQVVEAILATAPKVHVLATSQEPLGILG
                     EHVMRLSPLTVPHAGKLAAADALNSGAVRLFVERARAADAHFVLDDRSASTLAGICRR
                     LDGIPLAIEMAAARAPLLGIERLARRLDERFRILTSGRRTGLPRHQTLRATLDWSYSL
                     LLEREKIVLRRAAIFAGSFTLDAAAGVLRDETIDEFAVIDELAHLVARSLVVTDMNET
                     DPRYRLLETTRTYAAERLDESGERVVLASRHARFYRELLERAYEESWTSPDTAWRDAY
                     ALERDNVRNALEWALGTDGDAECAVALAGASSILWTYLALVSEERAWLERAVPIVENV
                     PPAIAGRLWHRLGMTYVEAEPKRALAAFERALALPQSELDLVTRASLFRSYAIGLVLG
                     GRMVDARAALAEALALGERTGIPRLISEIITTRASIRLPEGDTQGARSDQEKALELFR
                     NAGADRSALNTLCNLADAHWAAGNLERAIAGFLEAAARLRQATFVHRDLLGVTLGNLA
                     GALTEHGNFVEARCAAREALPLLREDQTAWLWFDHFALLAAAGGRIDDAARLAGYADA
                     MLAVHGRIRQPNEMRARESLDSMLAEKLRPDERTRLIEDGASLSEDEACRIVVLDETV
                     EAAGYSPLPGTR"
BASE COUNT          368 a          758 c          774 g          357 t
ORIGIN      
        1 cgtcgacgcg gcggccgagc acatgaaagc gtttgcgcaa ggcggatggc tcatcgagct
       61 tgcagccatc agtgacggcg agtcggtgcc ggcggcaatc gcgagcgcac tcgagatccg
      121 gctcgtgccg gggcagtcga acgccaaggc gctcgcgagc cggcttcgca cttacgacgt
      181 gctgctcgtc atcgacaatt gcgagcacgt tgtcgaagcc gtggcgcagg ttgtcgaggc
      241 gattctcgca accgcgccga aagtgcatgt gctcgcgacg tcccaggagc cgctcggcat
      301 cctcggcgag cacgtcatgc gcctgtcgcc gctgaccgtt ccccatgcag gcaagctcgc
      361 cgcagccgac gcgctcaact cgggcgccgt tcggctgttc gtcgagcggg cacgtgcagc
      421 cgatgcgcat ttcgttctcg acgacaggag cgcctcgacg ctggccggaa tctgccggcg
      481 gctcgatggg atcccgctcg ccatcgagat ggcggcagcg cgcgctccgc tcctcggcat
      541 cgaacgtctg gccagaaggc tcgacgagcg ctttcgcatt ctgacgagcg gccgccgaac
      601 gggtcttccc cgacatcaga cgctgcgtgc aacgctcgac tggagttaca gcctgctgtt
      661 ggagcgcgag aagatcgttc tgcgccgcgc cgcgatcttc gcgggcagct tcacgctgga
      721 cgctgccgcc ggcgtgctgc gcgacgagac gatcgacgag tttgccgtca tcgacgagct
      781 cgcgcacctc gtggcgcgct cgctggtcgt caccgacatg aacgaaaccg acccgcgcta
      841 tcggctgctc gaaaccacgc ggacttacgc cgccgaacgg ctggatgaat cgggagaacg
      901 cgtcgtgctt gcgagccgac acgctcgctt ctatcgggaa ctgttagagc gcgcgtacga
      961 agagtcgtgg acatcgcccg acaccgcgtg gcgcgatgcg tacgcgctcg agcgcgacaa
     1021 tgtgcgtaac gcgctcgagt gggccctcgg gaccgacggc gatgccgaat gcgccgtcgc
     1081 gctcgccggc gcttccagca ttctttggac atatctcgca ctcgtctcgg aggaacgcgc
     1141 atggctcgag cgcgccgtac cgatcgtgga gaacgtgccg ccggcgatcg ccggccggtt
     1201 gtggcaccgg ctgggcatga cctacgtgga agccgagccg aagcgcgccc tcgcggcttt
     1261 cgagcgcgcg ctcgcgcttc cgcaaagcga gctcgatctc gtcacgcgcg cgagcctctt
     1321 tcgcagctac gcgatagggc tcgtgctcgg cggcagaatg gtcgacgcgc gagccgcgct
     1381 cgccgaggcc ctggcgcttg gcgaacggac cggcatacct cgcctcatca gtgaaatcat
     1441 cacgacgcgc gcgagcatcc gcctgcccga aggagacacg caaggcgcgc ggtcggacca
     1501 ggagaaggcg ctcgagctat tccgcaacgc gggtgccgac cgcagcgcgc tgaacacgct
     1561 ctgcaacctg gcggacgcgc attgggccgc gggtaatctg gagcgtgcga tcgcggggtt
     1621 cctggaggcg gccgctcgcc tgcgccaggc gaccttcgtg caccgcgatc tcctcggcgt
     1681 gacgctcggg aaccttgcgg gcgcgctgac cgagcacggg aatttcgtgg aagcgcgatg
     1741 tgctgcgcgc gaggcgctgc cactgctgcg cgaagaccag acggcgtggc tctggttcga
     1801 tcacttcgca ttgctcgccg cagccggcgg ccgcatcgac gatgcagcgc gcctggccgg
     1861 gtacgccgac gcaatgctcg ccgtgcacgg acgcattcga caaccgaacg agatgcgcgc
     1921 ccgcgagtcg ctcgattcga tgctggcgga gaagttgcgg cccgacgagc ggacgcgtct
     1981 gatcgaggac ggagcgtcgc tgagcgaaga tgaagcgtgc cggatcgtcg tgctcgacga
     2041 aaccgtcgaa gccgccggat acagcccatt gccgggcacg cgatagtcct cgcggtgcgt
     2101 gcagtgctga ccgagcggcg gtgctcgcgt cgatttggca ccgggtcgca gcgggtgccg
     2161 atctcacccg ggattcgtcg ccgagacgat ccaggtcgaa ccgttcagcc ttacctgccc
     2221 ttccgccgcg gcaagcgggg cgaaagcgcg ctcgacg
//
LOCUS       DATIML010000516         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3278118, whole genome shotgun sequence.
ACCESSION   DATIML010000516 DATIML010000000
VERSION     DATIML010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3278118"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VLJ38_08955"
     CDS             <1..294
                     /locus_tag="VLJ38_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39685.1"
                     /translation="HKTAQVTHAIHAFPGWHVKTLEGPGEAKLDNDEHGRLRLSFSRP
                     GRYDVRVWFGASTAARIGCALTLVTSLVLVSLFAPWPRLRRRLLAFRYPEKAV"
     gene            291..1121
                     /locus_tag="VLJ38_08960"
     CDS             291..1121
                     /locus_tag="VLJ38_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HSU39686.1"
                     /translation="MISSEAIERARRDVRAAQTLFQAGLLPECDAHLRAALRTALGAW
                     SEAAPESAAEPVETDGLAALAQNGYPSVDRLRGVLVAERASNDVARRLPRDFEATWAE
                     TERLLRFSERRLLPAVVQKRRRRRMATALVLAVLLAIFVSERLWGRVRARASASYSPE
                     SPASYAIDGIDSTEWLLPDGTLGWLDLYLPRATDVRSVVVLNGHNRFYLDRGTQRVRV
                     TAYKKDQELASAEGSFKGITDGHPTLKLPLHADGVTRVRLEVLSFFGSGSAVAEVEVH
                     "
     gene            1154..>1559
                     /locus_tag="VLJ38_08965"
     CDS             1154..>1559
                     /locus_tag="VLJ38_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39687.1"
                     /translation="MLAPVSRLLDRFWLRAERALLDLPSDISQPVLTLAERGATAREA
                     AARTSRPPTPFGNPGHAAIAAELYREAIHWALLAHGARRAERPATSAAPASELPKLLA
                     AADRNLLRAAVESDKQLEELLSDLSRSYVEFAE"
BASE COUNT          243 a          540 c          513 g          263 t
ORIGIN      
        1 cacaagaccg ctcaagtgac gcacgcgatc cacgccttcc ccggttggca cgtaaagacg
       61 ctcgaaggcc ccggcgaagc caaactcgac aacgacgagc acggccggct gcggctgagc
      121 ttttcccgcc ccggtcgcta cgacgtgcgt gtctggttcg gcgcctcgac ggccgcgcgc
      181 atcggctgcg ccctcacgct cgtcacctcg ctcgtgctcg tgtcgctttt tgctccttgg
      241 ccgcggctgc gacggcggct cttggcattt cgctaccccg agaaagccgt atgatttcga
      301 gtgaagcaat cgagcgcgcc aggcgcgacg tgcgcgcggc ccagaccctc ttccaggcag
      361 gcctgctgcc cgaatgcgac gcgcacctgc gcgcggcgct tcggactgca ctcggggctt
      421 ggtcggaagc ggctccggaa agcgcggccg agccggtcga aaccgacggc ctcgcggctc
      481 tggcacagaa cgggtacccg agcgttgacc gcttgcgcgg cgtgcttgtc gccgagcgcg
      541 caagcaatga cgtcgcgcgc cgtctgccgc gggacttcga agccacttgg gcggaaacgg
      601 agcggctcct gcggttttcg gagcggcgac tgctgccggc cgtcgtgcaa aagcgccggc
      661 gccggcgcat ggcaactgcg ctcgtcttgg cggtcctgct cgcgattttc gtgagtgagc
      721 gcttgtgggg ccgcgtgcgt gcacgcgcgt cggcctcgta ttcgcccgag tcgcccgcct
      781 cctacgcgat cgacggcatc gattccaccg agtggctgtt gcccgacggc acgctcggct
      841 ggctcgatct gtacttgccg cgggcgaccg acgttcggag cgtggtcgtg ctgaacggcc
      901 acaatcgctt ttacctggat cggggcacgc aacgcgtccg cgtcaccgct tacaagaagg
      961 accaagagct tgcgagcgcg gaaggcagtt tcaagggtat cacggacgga catccgaccc
     1021 tcaagctccc gcttcacgca gacggcgtga cccgcgttcg gctcgaagtg ctctcgttct
     1081 tcggcagcgg ctcggccgtc gccgaagtcg aagtgcactg aatctcgggg cgagtacgat
     1141 caagggcgtt acggtgctcg ctccagtatc acgcttgctc gatcgctttt ggctccgcgc
     1201 tgaaagagct ctgctcgacc tgccgagtga catctcacag cctgtgctca cgctcgcgga
     1261 gcggggggcg accgccaggg aagcggctgc gcgcacgagc cgtccgccca cgccctttgg
     1321 taatccggga cacgcggcga tcgcggccga gctttaccgc gaggcgatcc actgggcgct
     1381 cctggcgcac ggcgcacggc gagccgaacg acccgccacc agcgcggcgc ctgcgagcga
     1441 gctgccgaaa cttctcgccg cggccgaccg aaacctgctg cgcgccgccg tcgaaagcga
     1501 caagcaactc gaagagctgc tctccgattt gtcgcggagt tacgtcgaat tcgccgagc
//
LOCUS       DATIML010000517         2477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5302926, whole genome shotgun sequence.
ACCESSION   DATIML010000517 DATIML010000000
VERSION     DATIML010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5302926"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1043)
                     /locus_tag="VLJ38_08970"
     CDS             complement(<1..1043)
                     /locus_tag="VLJ38_08970"
                     /inference="COORDINATES: protein motif:HMM:NF023855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching enzyme N-terminal
                     domain-containing protein"
                     /protein_id="HSU39688.1"
                     /translation="MKGREKAGWKPSKGGPWPVVQLAGELAPGEREWLHTNGAGAYAM
                     STVPLMHTRRHHGAFVAMLPPPLGRHVIVSHGDTSVHIEDDRRTYRLSTHQFPNVAPT
                     LGYRLLEYFAMDPIPRWTYRLGAHTLERTLCLARGRNATVWSYTWYGRSPAKISIRPL
                     MPLRPVDALMNEHGGMMQVVTLRPGAVELRPVPALPPVHFVHEGVFMGSPDWWRRFEY
                     LEDRADGLAFQEDMWTPGVLELQLEPGKTSHVGVSVGAPLDTAPANIVQEAAEFLRRQ
                     DLGPTRSNAVRVLSVAAEQFCLDARDPPCIAAGYPSHDFYVRDSILALPGLLLAREQL
                     DRAENVLGALLSH"
     gene            complement(1040..1918)
                     /locus_tag="VLJ38_08975"
     CDS             complement(1040..1918)
                     /locus_tag="VLJ38_08975"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF020090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HSU39689.1"
                     /translation="MSLRFVLLGHPVAHSLSPAIHHAAYAALGLPHRYELFDAVDVQA
                     LEAACAELRSGTIAGANVTIPWKREALKLADRADVSASDVGAANVLVRSPAGEIVAYN
                     TDVPALAREIGEQVATPGRGLVLGSGGAALAAVAALGRLGAKEIGVSARRFDAKVSRD
                     AWPGAEDFGRLGATLVAWPDPHANELGDFAVSADVIVQATSAGMHGAGPGSSVSAVVP
                     WARLGPRTLAYDLVYNPADTDFLRAARAHALPARGGLGMLVGQAAFAFTLWLGAEPDR
                     RAMRRAAETELSRRSA"
     gene            complement(1975..>2477)
                     /locus_tag="VLJ38_08980"
     CDS             complement(1975..>2477)
                     /locus_tag="VLJ38_08980"
                     /inference="COORDINATES: protein motif:HMM:NF014640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HSU39690.1"
                     /translation="NLSHLRASLGDPRFILIERQQELDELRERLRRRIERHVQVQRAR
                     TVTLERRLASRHPQNVIGRARTELGPLAVRLHAAEARRLSRYRAELAQRAGRLDALSP
                     LTVLSRGYAIATKADGRALRSASEITPGEDIAVRLGRGRFAARVTTVTDAAEPGATTP
                     KPTESP"
BASE COUNT          389 a          866 c          867 g          355 t
ORIGIN      
        1 tgatggctga gcagcgcgcc gagcacgttt tccgcgcggt cgagctgctc gcgcgcgagc
       61 agcaacccgg gcagcgccaa aatcgaatcg cgcacgtaga agtcgtgact cggatagccg
      121 gctgcgatgc agggcggatc acgcgcgtcc aggcagaact gctcggccgc gacactgagc
      181 acgcgcacgg cattcgaacg cgtcggaccc aaatcttggc gccgcagaaa ctccgccgct
      241 tcctgcacga tgttggcggg tgccgtgtcg agcggcgcac cgaccgaaac gccgacgtgg
      301 ctcgtcttac ccggttcgag ctgaagctcg agcacgccag gggtccacat gtcctcctga
      361 aacgcgagcc cgtcggcgcg atcctcgagg tactcgaatc tacgccacca gtcgggcgaa
      421 cccatgaaca ccccctcgtg cacgaagtgc acgggcggca gcgcggggac cggccggagc
      481 tcgacagcgc cgggtctgag cgtcacgacc tgcatcatgc cgccgtgctc gttcatgagc
      541 gcatcgaccg gcctgagcgg catcagcggg cgaatgctga tcttcgcggg actccgcccg
      601 taccaggtgt agctccacac cgtggcgttg cgaccgcgcg ccagacagag cgtgcgttcg
      661 agggtgtgcg cgccgaggcg ataggtccag cgtggaatcg ggtccatcgc gaaatactcg
      721 agcagccggt agccgagcgt cggcgcgacg ttcgggaact gatgcgtcga aagccgatag
      781 gtgcggcgat cgtcttcgat gtgcacgctc gtatcgccgt gactcacgat gacgtgccgc
      841 ccgagcggcg gcgggagcat ggcgacgaaa gcgccatggt gccggcgcgt atgcatgagc
      901 ggcaccgtac tcatggcgta agcgcctgct ccgttcgtgt gcagccactc ccgctcaccg
      961 ggcgcgagct ctcccgcgag ctgcacgacg ggccacgggc cgcccttcga gggcttccag
     1021 cccgcctttt cgcgaccctt cacgcgctcc tccgcgagag ctcggtctcg gccgcgcgcc
     1081 gcatcgcccg gcgatcgggt tcggcgccga gccagagcgt gaacgcgaac gccgcctgtc
     1141 cgaccagcat cccgagcccg ccgcgcgccg gcagagcgtg cgcgcgcgcc gcgcgtagga
     1201 agtccgtgtc ggcggggtta tagacgaggt catacgcgag cgttcgcgga ccgagccgag
     1261 cccaaggcac gacggccgac acggagctgc ccggccccgc cccgtgcatg cccgcgctcg
     1321 tcgcctgcac gatcacgtcc gcgctcaccg cgaagtctcc gagctcgttc gcatggggat
     1381 ccggccaagc gacgagcgtc gcgccgagcc gaccaaagtc ctccgccccg ggccaagcgt
     1441 cacgcgaaac ttttgcatcg aagcgccgcg cggacacgcc gatctccttc gctccgaggc
     1501 ggccgagcgc cgcaacggcc gcgagcgccg cgccgccact gccgagcacg agccctcttc
     1561 caggcgtggc cacctgctcg cctatctcgc gagcgagcgc cggtacgtcg gtgttgtagg
     1621 cgactatctc acccgcaggc gagcgcacga gcacgttcgc ggcccccacg tccgacgcgc
     1681 tcacgtcggc gcggtcggcg agcttcagcg cctcgcgctt ccaggggatg gtcacgttcg
     1741 caccagcgat agtgccgcta cggagctccg cgcaggccgc ctcgagcgcc tgcacgtcga
     1801 ccgcgtcgaa aagctcgtag cggtggggca aaccgagcgc tgcgtacgcc gcgtgatgga
     1861 tcgcgggcga cagagaatgg gccacgggat gcccgaggag gacgaagcgg agactcactt
     1921 gcctaggtgc acacgtggaa gaggaagtcc gtcatgcggc tgaggcacgc gccgtcaagg
     1981 actctccgtg ggtttggggg tggtggcgcc cggttccgcg gcgtccgtca ccgtcgtcac
     2041 gcgggccgca aaccggccgc ggccgagccg tacggcgatg tcctcacccg gtgttatctc
     2101 gcttgcgcta cggagcgcgc ggccgtccgc tttggtggcg atggcgtaac cgcgcgagag
     2161 cacggtgaga ggcgagagcg cgtcgagccg tcccgcgcgc tgtgcgagct cggcgcgata
     2221 acgactcagg cgacgcgcct cggccgcgtg gagccgcacg gcgagcggcc cgagctcggt
     2281 gcgcgcgcgg ccgatcacgt tttgcggatg gcggctcgcg aggcgccgtt cgagcgtgac
     2341 ggtgcgcgcg cgctgcactt gcacgtggcg ttcgatgcgc cggcgcagcc gctcgcggag
     2401 ctcgtcgagc tcttgctgcc gctcgatcaa gatgaagcgc ggatcgccga gcgaggcccg
     2461 caggtgcgag aggttcg
//
LOCUS       DATIML010000518         5898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4433276, whole genome shotgun sequence.
ACCESSION   DATIML010000518 DATIML010000000
VERSION     DATIML010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5898
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4433276"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..927
                     /locus_tag="VLJ38_08985"
     CDS             <1..927
                     /locus_tag="VLJ38_08985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39691.1"
                     /translation="HVIDAGAAVNIMLKEAAKNVKFNFLAPYFVEHQGLEPMLAIRGV
                     YQVERQGQKFAGDFKLIVVPRSEYPLMCWLDTPGYAKSFARVTSEFAKSFKFQSTRAA
                     PTRGELWIVSVDGVPVGFSRETTYVQEGGKVSRIALSARFLPAGPGEMSFDDDAEIIA
                     MDKDGAITTGKYVSAENGETAYTIDIERTKAGYNYVGTIQGKAVNGSFKSKQPLKGHY
                     AVELKLKGLAASKKKAKFEAMEYDPSVDAANASKVTYEVTPEGEGMTITSSLGQRGMT
                     SKANGQGVIKQILLSAGSKKIQIDLVEESGGL"
     gene            917..1888
                     /locus_tag="VLJ38_08990"
     CDS             917..1888
                     /locus_tag="VLJ38_08990"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HSU39692.1"
                     /translation="MGCNWASAWLAGFALACAAPAAGVHGGTPPPAVAAREHETHGSA
                     AGAHEKIELGPDVFMSSIPVQVSPRARELVAHTVSDDDFARALRVRVEVMHAYKNLGE
                     LSRRTHVPLVNGIFQLSDLSHLGSRESPSKRDRASTFVIDFDEARFGDAAHALEHEGN
                     APSPAAVAAFADHYISDKTYVHSFDVASRVATTHAGDCTEHAVFTTALLRRFGFTARV
                     VLGIVLVGVSERENEPKVVAFGHAWVERYEHGGWHIVDTALGRGYETDPDAAAARGVP
                     PGVTLRLAYLPINVLKDESASYARTLMDQVGVDSVLGVEVDEKDGPR"
     gene            complement(1912..2325)
                     /locus_tag="VLJ38_08995"
     CDS             complement(1912..2325)
                     /locus_tag="VLJ38_08995"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HSU39693.1"
                     /translation="MTDADLVLKKLALIETYVRELSTLADASRIESDLREERFVEHTL
                     QIAVQAALDVASHIASDERWGEPRTNQELFELFARHGWIGEELARSLRAAVGFRNVLV
                     HGYASVDRAIVRDILENHLPDLLNFVAAVRARLDS"
     gene            complement(2322..2723)
                     /locus_tag="VLJ38_09000"
     CDS             complement(2322..2723)
                     /locus_tag="VLJ38_09000"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HSU39694.1"
                     /translation="MTPPEIEAILERELLRRVPGLSAAYLFGSFGRGEARPDSDVDLA
                     LLYARPPASTLRDQPFLLAAELESLFGRSVDVIVLNTAPADLVHRILRDGRLIVQTNP
                     SARIAFEVRARNEYFDLLPLLRRYRRAPDVA"
     gene            complement(2783..3832)
                     /locus_tag="VLJ38_09005"
     CDS             complement(2783..3832)
                     /locus_tag="VLJ38_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39695.1"
                     /translation="MTPVRSHTTVLFWLAALVAVAAAAFMFYRSRQRPAPPPPAPPPP
                     RAAAPSNQVDDPLAPGRPATLDPTRPAASGDWVSAHPGFQYSRPSSERGGANPCALPL
                     GDTSAFAPWTNLSKGRVTLPVAGGVDDQGGFDLVLHFHGDELARRELAASGQRFVLYG
                     LTLDASQSYAGLFAGSKFFAAIVHEVEQVVGRTHGGNAHVRHLGVSAWSAGYMAVLSI
                     LAQPEAKATDAVILIDGLHGPRGHLEQPLATFVDFAKRAEAGERLMIITHSSIDPPDF
                     ASTTEAAHYMLSALGEKPIAVRREDRYGLELIEYFSKGDFHVRGYAGNDKADHCAQVT
                     LLRDAYAAVGRRWQR"
     gene            complement(3829..5220)
                     /gene="asnS"
                     /locus_tag="VLJ38_09010"
     CDS             complement(3829..5220)
                     /gene="asnS"
                     /locus_tag="VLJ38_09010"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004244664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HSU39696.1"
                     /translation="MLKPGEYVRDLLSSEPGRRVTARGWIKTRRDSKGVHFLQLSDGS
                     CFRDLQVVIASGSVAEEPLAAATTGASIVVEGELVPSPAAGQRVELHAESLRILGPAD
                     PKTYPLQKKGHSFEFLREIAHLRPRTNTFGAVFRVRSALSFAIHSFFKERGFVYVHTP
                     IITASDAEGAGAMFGVTTLDLMNLPRAPDGRVDFQQDFFGKPAYLTVSGQLEGEIFAL
                     ALSNVYTFGPTFRAENSNTPRHLAEFWMVEPEMAFCDLADDMQLAEDFLKYVINYVLD
                     NCQHDLEFFNERIDNTVLGTLEHVATSEFERVTYTEAIRLLEAAGKSLEFPVHWGADL
                     QSEHERYLTEEKFKRPVIVTDYPREIKAFYMRANDDGKTVRAMDVLAPRIGEIIGGSQ
                     REERTDVLRERIAAQKLDEKAYWWYLELRKYGSVPHAGFGLGLERMLMYLTGMKNIRD
                     VVPFARTPGSAEF"
     gene            5315..>5898
                     /locus_tag="VLJ38_09015"
     CDS             5315..>5898
                     /locus_tag="VLJ38_09015"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39697.1"
                     /translation="MSSDDTSQPNARASAPALEEFRPRPSDMDGLLLAARYRVHGELG
                     RGATSIAYLAEDTVDARPVVIKWLFPRAARDPQVRERFVFGARAAMAVEHNAVARVLA
                     VEEPEGEPPYIVMEALHGEPLSDYLERHGPIPEPVVLMMAREIAAGLVAAHEAGIIHR
                     DIKPGNLFVLESSGAPRIRISDFGVAKATRDPDAG"
BASE COUNT         1044 a         1907 c         1989 g          958 t
ORIGIN      
        1 cacgtgatcg acgcgggagc ggccgtgaac atcatgttga aggaggccgc gaagaacgtg
       61 aagttcaact ttctcgcgcc gtacttcgtc gagcaccagg gcctcgagcc catgctggcg
      121 atccgcggcg tgtaccaagt cgaacgccag ggtcagaaat tcgcgggcga tttcaagctc
      181 atcgtcgtgc cgcgctcgga gtatccgctc atgtgctggc tcgacacgcc cggctacgcg
      241 aagagctttg cgcgcgtgac ctccgagttc gccaagagct tcaaattcca gagcacgcgc
      301 gcagccccca cgcgcggcga gctctggatc gtgtcggtcg acggcgtacc ggtcggattc
      361 tcacgcgaaa ccacctacgt gcaggagggc ggcaaagtga gccgcatcgc gctgtcggcg
      421 cgcttcctgc ccgctggacc cggcgaaatg tccttcgacg acgacgccga gatcatcgcc
      481 atggacaagg acggcgcgat cacgaccggc aagtacgttt cagccgagaa tggcgagacc
      541 gcctacacga tcgatatcga gcgcaccaaa gccgggtaca actacgtcgg aaccattcag
      601 gggaaggcgg tgaacggcag cttcaagtcg aagcagccgc tcaagggtca ctacgcggtc
      661 gagctcaagc tcaagggcct tgccgcttcc aagaaaaaag ccaaattcga agcgatggag
      721 tacgacccgt cggtcgacgc cgcgaatgcc tccaaggtca cctacgaggt gacgcccgaa
      781 ggcgaaggca tgaccatcac gtcgtcgctc ggccagcgcg gcatgacgtc gaaggccaac
      841 ggccaaggcg tcatcaagca gatcttgctc tcggccggct cgaagaagat ccagatcgat
      901 ctggtggaag aatctggtgg gttgtaactg ggcttccgcc tggctcgcgg gcttcgctct
      961 cgcgtgtgcg gcgccggcag cgggcgtgca cggcgggacg ccgccgcctg cagtcgccgc
     1021 tcgggagcac gagacgcacg gttccgcggc gggcgcgcac gaaaaaatcg agctcggtcc
     1081 cgacgtcttc atgtcgtcga tccccgtgca agtgagtccc cgggcgcgcg agctcgtcgc
     1141 ccacacggtg agcgacgacg atttcgcgcg tgcactccgc gtccgcgtcg aggtaatgca
     1201 cgcgtacaag aatctcggcg agctcagccg ccgcacgcac gttccgctcg tcaacggcat
     1261 cttccagctc tcggacttgt cgcacctcgg cagtcgcgag tcgccgagca agcgcgaccg
     1321 cgcgagcacg ttcgtgatcg atttcgacga ggcgcgcttc ggcgacgccg cgcacgcgct
     1381 cgagcacgag ggaaatgcgc cttcgcccgc ggccgtagcc gctttcgccg accactacat
     1441 cagcgacaag acctacgtgc actcgttcga cgtggcctcg cgcgtcgcga ccacgcacgc
     1501 gggcgactgc accgagcacg ccgtgttcac gaccgcgctc ttgcgccgct tcgggttcac
     1561 cgcgcgcgtc gtgctcggca tcgtgctcgt cggcgtgagc gagcgcgaga acgagcccaa
     1621 agtcgtcgcc ttcggccacg cctgggtcga gcgttacgaa cacggcggct ggcacatcgt
     1681 cgatacggcg ctcggccgcg gctacgagac ggatccggac gcggcggcgg cgcgcggcgt
     1741 gccgcccggc gtgacgttgc ggctcgcgta tctgcccatt aacgtgctca aagacgaatc
     1801 ggcgtcctac gcgcggacgc tgatggatca agtcggcgtc gatagcgtac taggcgtcga
     1861 agtcgacgaa aaagacgggc cgcgctgacg ctcacgtacc tgtcagagtc ttcacgagtc
     1921 cagtcgcgcg cgaacagccg ccacgaaatt caagagatcc gggaggtggt tctcgagaat
     1981 gtcgcgcacg atggctcggt cgacgctcgc ataaccgtgg acgaggacgt tccgaaagcc
     2041 gacggcggca cgcagcgagc gggcgagctc ttcgccgatc caaccatgcc gagcgaagag
     2101 ttcgaagagc tcttgattcg tccgaggttc gccccagcgt tcgtcggaag caatatgcga
     2161 tgcgacatcg agcgccgctt gcacggcgat ctgtagcgtg tgctcgacga aacgctcctc
     2221 ccgcaggtcg ctctcgatcc gtgaagcgtc cgcaagggtg ctgagctcgc gcacgtaggt
     2281 ttcgatgagc gcgagcttct tcaggacgag atcggcgtcg gtcatgcgac gtctggtgcg
     2341 cggcgatatc ggcgcagcaa aggcaacaga tcgaagtact cgttccgtgc acggacctcg
     2401 aacgcgatgc gagcggacgg gttcgtctga acgatcagcc ggccgtcccg caggatccga
     2461 tggacgaggt cggcgggagc cgtgttgagt acgatgacgt cgacagagcg gccgaacagg
     2521 gattcgagct ccgcggcgag caggaagggc tggtcccgca gggtggaggc aggcggccgg
     2581 gcgtagagca aggctaggtc cacgtcactg tcggggcgcg cttcgccgcg gccaaaactt
     2641 ccaaagaggt atgccgcgga gagccccgga acccgtcgca agagctctcg ctcgagaatg
     2701 gcctcgattt cgggcggagt catcgctcgg aacctaacgt gaggccggcc tgcacgctag
     2761 ttcttgctga acgacgcgcg agtcagcgct gccaacgacg cccgacggcc gcgtaggcgt
     2821 cgcgcaagag cgtgacctgc gcgcagtgat cggccttgtc gttgccggca tagccacgca
     2881 cgtgaaagtc gcccttcgag aaatactcga tgagctcgag tccgtagcgg tcctcacgcc
     2941 ggacggcgat gggcttttcg ccgagcgccg agagcatgta gtgcgccgcc tccgtggtcg
     3001 aagcgaaatc cggcggatcg atcgacgagt gcgtgatgat catcagccgc tcgcccgctt
     3061 cggcgcgctt ggcgaaatcg acgaaggtcg cgagtggttg ttcgaggtgt ccgcgcgggc
     3121 cgtgcaggcc gtcgatcagg atcacggcgt ccgtagcctt ggcctcgggc tgcgcgagaa
     3181 tcgagagcac ggccatgtag ccggcgctcc acgcgctcac gccgaggtga cgcacgtgcg
     3241 cgttcccgcc gtgcgtgcgg ccgaccactt gctcgacctc atgcacgatc gcggcgaaaa
     3301 atttcgaacc ggcgaagagc cccgcgtagc tttggctcgc gtcgagcgtg aggccgtaga
     3361 gtacgaatct ttggccgctc gccgcgagct ctcggcgcgc gagctcgtcg ccgtggaagt
     3421 gcagcacgag gtcgaagccg ccctggtcgt ccacgccgcc tgcgacgggc agggtgacgc
     3481 gacccttgct gaggttcgtc caaggcgcga acgcgctcgt gtcgcccagg ggcagcgcgc
     3541 aggggttcgc gccgccgcgt tcgctgctcg gccgtgaata ttgaaacccg ggatgcgcgc
     3601 tgacccagtc gccgctcgcg gctggacgcg tggggtcgag cgtcgcggga cgacccggcg
     3661 cgagcggatc gtccacttgg ttcgaagggg ctgctgcgcg aggcggtggc ggcgcgggag
     3721 gtggcggcgc gggccgctgc cgcgagcgat agaacatgaa cgccgcggcc gcgacggcga
     3781 cgagcgccgc gagccagaag aggaccgtgg tgtgtgagcg aacgggcgtc aaaactctgc
     3841 tgaacccggc gtgcgcgcga acggaaccac gtcgcgaatg ttcttcatgc ccgtgaggta
     3901 catgagcatg cgttcgagcc cgagcccgaa gccggcgtgc ggcaccgagc cgtatttgcg
     3961 gagctcgagg taccaccagt aggctttttc atcgagcttc tgcgccgcga tgcgctcgcg
     4021 gagcacgtcg gtgcgctcct cgcgctgact gccgccgatg atttcgccga tgcgcggcgc
     4081 aagcacgtcc atcgcgcgca ccgttttccc gtcgtcgttc gcccgcatgt agaacgcttt
     4141 gatctcgcgc gggtagtcgg tcacgatcac gggccgtttg aatttttcct cggtgaggta
     4201 gcgctcgtgc tcactctgga ggtcggcgcc ccagtgcacg gggaactcca agctcttgcc
     4261 cgccgcctcg agcaggcgaa tcgcctcggt ataggtgacg cgttcgaact ccgaagtcgc
     4321 cacgtgctcg agggttccga gcacggtatt gtcgatgcgc tcgttgaaaa actcgagatc
     4381 gtgctggcag ttgtcgagca cgtagttgat gacgtacttc agaaaatcct cggcgagctg
     4441 catgtcgtcc gccaggtcgc aaaacgccat ttcgggctcg accatccaga attccgcgag
     4501 gtggcgcggt gtattcgagt tttcggcccg gaacgtcggc ccgaacgtgt agacgttgct
     4561 cagcgcgagc gcgaagatct cgccttcgag ctggccgctc acggtgagat aagcgggctt
     4621 gccgaagaaa tcttgctgaa aatcgacgcg accgtccggc gcgcgcggca gattcatgag
     4681 gtcgagcgtc gtgacgccga acatggcgcc cgcgccctcc gcgtcggaag cggtgatgat
     4741 cggtgtgtgc acgtagacga acccgcgctc cttgaaaaac gaatgaatcg cgaacgaaag
     4801 cgcgctccgc acgcgaaaca cggcgccaaa cgtgttggtg cgcggccgaa ggtgcgcaat
     4861 ctcgcgcaag aactcgaacg agtggccctt cttttggagt gggtacgtct tcggatcggc
     4921 gggaccgagg atgcgaaggg actcggcgtg gagctcgacg cgctggcccg cagccggcga
     4981 cggcacgagc tcgccctcga ccacgatcga cgcgcccgtc gtcgcggcgg cgagcggttc
     5041 ttcggcgacg ctgccgctcg caatcaccac ctgtaagtcg cggaaacaac tgccgtcgct
     5101 gagctgcaaa aagtgaacac ctttgctgtc gcggcgcgtc ttgatccagc cgcgcgccgt
     5161 cacacggcgt ccgggttccg agctcaggag gtcacgcacg tactcgccgg gcttcagcac
     5221 gtcgtcatga gtacgccgcc cgcgctgaac ccgcaaccgg ggcggggttg ctcccgcgga
     5281 ggtcatcgtc tacgccttag gtgtacgcct caagatgagc tccgacgaca cgagccagcc
     5341 caacgctcgg gcgtccgcac cggcgctcga agagttcagg ccaaggccga gcgatatgga
     5401 cggcctcctg ctcgccgcgc gctaccgcgt gcacggggag ctcgggcgcg gcgccacgtc
     5461 catcgcgtac ctcgcggagg acacggtgga cgcgcggccc gtcgtcatca agtggctctt
     5521 cccgcgcgcg gcgcgcgacc cgcaggttcg ggagcgcttc gtcttcggcg cgcgcgcggc
     5581 catggccgtc gagcacaacg ccgtggcgcg cgtgctcgcc gtggaggagc cggagggcga
     5641 gccgccgtac atcgtgatgg aggcgctgca cggcgagcca ctctccgact acctcgagcg
     5701 ccatggcccc atccccgagc ccgtcgtgct catgatggcg cgcgagatcg cggcgggact
     5761 cgtggccgcg cacgaggccg gcatcattca tcgcgacatc aagcccggta acctgttcgt
     5821 gctcgagtcg agcggagcgc cgcgcattcg catcagcgac ttcggtgtcg ccaaggccac
     5881 gcgcgatccc gacgccgg
//
LOCUS       DATIML010000519         3135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1837638, whole genome shotgun sequence.
ACCESSION   DATIML010000519 DATIML010000000
VERSION     DATIML010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1837638"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..1744)
                     /locus_tag="VLJ38_09020"
     CDS             complement(191..1744)
                     /locus_tag="VLJ38_09020"
                     /inference="COORDINATES: protein motif:HMM:NF024770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSU39698.1"
                     /translation="MSRSGDGSRPGRGPRVALLFCYATDEYEWLLVQAVRGVVESAGG
                     TVVAIVGGALGDPHAPRHGRGFSLELVDRENADAVLAISSVIGQYEGPRVMGAWLAQK
                     GLPAFSIGAAEGVPSVGIDDADGVTQLMRHLIEHHGYRRIAFIRGTMTNPEAEARYRA
                     YVRVLAENQIPYDPELVLPGEFTRESGVEAMYELFDSRQVPVGNIDAIVAANDYTAFG
                     VIDELSRRRIEVPDAVAVVGFDDVALARVHAPSLTTVRQPLERLGVEAARLLLAALSG
                     HPPPLTTTLGTELVLRRSCGCVPTDLPPPLEPFDDEETQADHPSDAMLRALAAEIRGA
                     KGEFARALDPLLHRLAAGNARELEQNRRVADELAMRWRLAREDLVHDGLHRLARALHA
                     RMFGPQALLSTTLAEHLPTLGVDACVVAELATPGTLTELKLAFGFDAQNLQPQMARYP
                     AKQLVPPGFEHLLARSALVLPLCYGEESVGLTLMPLGDRDGAFYEILAEVFGAVVKAL
                     DVRRRAESR"
     gene            complement(1783..2829)
                     /locus_tag="VLJ38_09025"
     CDS             complement(1783..2829)
                     /locus_tag="VLJ38_09025"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HSU39699.1"
                     /translation="MKITDPRTEAVPGFVASTARLLNDPRDTVFVWLALRCLGAAAIG
                     VTLFFVQLPWRFVAPAYWLLLFGTLMDRFTLMLHCTSHRPLFSKRFRALNHVIPWVIG
                     PFFGQTPNTYFAHHLGMHHREENLAADLSSTMRFKRDRLDHWLRYCGRFLVVGLFELE
                     IYFFRKRQWKLFKRVLAGESCYWLGLAALAFVKPIPTLVVFVVPLLAIRTAMMMGNWA
                     QHSFIVASSPQNPYHSSITCLNTRYNRRCFNDGYHILHHVKPACHWTEHPAEFEQALR
                     DYARYDAIVFDGIDYFEIWGCLMLRRWSKLASHVVRLDGAPARTPEQVIELLKARVQP
                     VPAGLVVPADGLAA"
     gene            2896..>3135
                     /locus_tag="VLJ38_09030"
     CDS             2896..>3135
                     /locus_tag="VLJ38_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39700.1"
                     /translation="MDEDITVPVSPRHSVRLAREYETIVKKGQRRDFVVRTITKREAG
                     GVPLMTAEIVIAGEETRQEFPLARDYPLHFRKTYFP"
BASE COUNT          562 a         1025 c         1058 g          490 t
ORIGIN      
        1 tgagtttgag agcggctcgt gccgctcgat tcgaaagaat tcactggttg gtcgttttct
       61 ggctggcggc agagtccggg gcctcacccc gctcgaacgg cgattccctc gccggtcggg
      121 ccgcaagccg ccgtcctttt agctcaaacg ggcccctcgt gccagccgag ccttctgctc
      181 gagccgaaac ctagcgcgat tccgctctcc gccgaacgtc gagcgctttc acgacggcgc
      241 cgaatacttc cgccaaaatt tcgtaaaagg cgccgtcgcg atcgccgagc ggcatgagcg
      301 tgagccccac cgactcttcg ccgtaacaga gcggcagcac gagcgcgctc cgcgccaaca
      361 ggtgttcgaa gcccggcggc acgagctgct tcgccgggta gcgcgccatc tgcggttgga
      421 gattctgcgc gtcgaaaccg aacgcgagct tcagctccgt cagcgtgccg ggcgtggcga
      481 gctcggcgac gacgcacgcg tccacgccga gagtcggcag gtgttcggcg agcgtcgtcg
      541 acaagagcgc ctgcggtccg aacatgcgcg cgtgcagcgc gcgcgcgagc cgatgcaggc
      601 cgtcatgaac caaatcctcg cgcgcgagcc gccagcgcat ggcgagctcg tcggcgacgc
      661 ggcggttttg ctcgagctca cgcgcgttgc ccgcggcgag gcgatgcagc agcggatcga
      721 gcgcgcgcgc gaactcgccc ttggcgccgc ggatctcggc ggcgagcgcg cgcagcatgg
      781 cgtcgctcgg atgatcggct tgtgtttcct cgtcgtcgaa aggctcgagc ggcggcggca
      841 gatccgtcgg gacacagccg caggagcgcc tgagcacgag ctcggtgccg agcgtcgtcg
      901 tcagcggtgg agggtgcccc gagagcgcgg cgagcagcag gcgagcagcc tccacgccga
      961 gtcgttcgag cggctgccgc acggtggtga gcgacggggc gtgcacgcgt gcgagcgcca
     1021 cgtcgtcgaa gcccacgacc gccaccgcgt cgggcacctc gatgcggcgc cgtgaaagct
     1081 cgtcgatcac gccgaacgcc gtgtagtcgt tggccgcgac gatggcgtcg atgttgccca
     1141 ccggcacctg acgcgaatcg aagagctcgt acatggcttc gacgccgctc tcgcgcgtga
     1201 attcgcccgg caagacgagc tcaggatcgt aagggatctg attttccgcg agcacgcgca
     1261 cgtacgcgcg gtagcgcgct tccgcttccg ggttggtcat cgtgccgcgg atgaacgcga
     1321 tccggcggta gccgtggtgc tcgatcaggt gccgcatgag ctgcgtgacg ccgtcggcgt
     1381 cgtcgatgcc gacgctcggc acgccttccg cggcgccgat gctgaacgcg ggcaaaccct
     1441 tctgcgcgag ccaagcgccc atgacgcgcg ggccttcgta ctggccgatc acgctagaga
     1501 tcgcgagcac cgcgtccgcg ttttcgcgat cgacgagctc gagcgagaag ccccggccgt
     1561 gccggggcgc gtgcggatcg ccgagcgcac cgccgacaat cgcgacgacc gtgccccccg
     1621 ccgactccac gacgccgcgc accgcttgca cgagcaacca ctcgtactcg tcggtcgcgt
     1681 aacagaagag tagcgcgacg cgcggaccac gcccgggcct gctgccgtcg ccgctcctgc
     1741 tcacgccttc agcctacacc tcgtgcccgc aggacgtcac gctcaggctg cgaggccgtc
     1801 ggccggcacg acgaggcctg ccggcacggg ttggacgcgc gccttcaaga gctcgatcac
     1861 ctgctcgggc gtccgtgccg gcgcgccgtc gagtctcacg acgtgcgagg cgagcttcga
     1921 ccaacgccgc agcatcaaac agccccaaat ctcgaagtaa tcgatgccgt cgaagacaat
     1981 cgcgtcgtag cgcgcgtagt cgcggagtgc ctgctcgaat tccgccggat gctccgtcca
     2041 gtggcaggcg ggcttcacgt ggtggaggat gtgataaccg tcgttgaaac agcgacgatt
     2101 gtagcgcgtg ttgaggcagg taatgctcga gtgataggga ttttggggcg agctcgcgac
     2161 gatgaacgag tgctgtgccc aattgcccat catcatcgca gtgcggatcg cgaggagcgg
     2221 cacgacgaac acgacgagcg tcgggattgg cttgacgaaa gcgagcgccg cgaggccgag
     2281 ccagtagcag ctttcaccgg cgagcacgcg cttgaagagc ttccactgcc gcttgcgaaa
     2341 aaagtagatc tcgagctcga agagccccac gaccaggaag cgtccgcaat agcgcagcca
     2401 atgatcgagc cggtcgcgct tgaagcgcat ggtcgagctc agatcggcgg cgaggttctc
     2461 ctcgcgatga tgcatgccca ggtggtgagc gaaatacgtg ttcggcgtct gaccgaagaa
     2521 gggtccgatg acccacggaa tcacgtgatt gagcgcacgg aaacgcttgc tgaagagcgg
     2581 ccgatgcgac gtgcaatgga gcatcagcgt gaagcgatcc atcagcgtgc cgaacaggag
     2641 cagccaatac gccggcgcga cgaaccgcca cggcagctgg acgaagaaca gcgtcacccc
     2701 gattgcggcc gcaccgagac agcgcagcgc gagccaaacg aagacggtgt cgcgaggatc
     2761 gttgagcagc cgcgccgtcg aggcaacgaa gcccggcacg gcctcggttc gggggtcggt
     2821 gattttcatg tcgggacggt ttgtagccct tcggggcttt gcgtcgagcc gccgagtttg
     2881 ggaatgtagg cggcgatgga cgaggatatc acggtcccag tctcgccgcg gcactcggtc
     2941 cggctcgcgc gcgagtacga gacgatcgtg aaaaagggcc agcgccgcga tttcgtcgtt
     3001 cggaccatca ccaagcgtga ggccggcggg gtcccgctca tgaccgccga aatcgtcatc
     3061 gccggcgaag agacccgcca agaatttccg cttgcgcgcg actaccccct ccattttagg
     3121 aaaacctatt tcccg
//
LOCUS       DATIML010000520         2186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3279044, whole genome shotgun sequence.
ACCESSION   DATIML010000520 DATIML010000000
VERSION     DATIML010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3279044"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VLJ38_09035"
     CDS             <1..211
                     /locus_tag="VLJ38_09035"
                     /inference="COORDINATES: protein motif:HMM:NF012563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008184 - glycogen phosphorylase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HSU39701.1"
                     /translation="GGWTRRSILNVALSGRFSSDRTILGYARDVWGVYVPPPQPGRGR
                     TISAAPPHDADAVAEMPPSVLRYSE"
     gene            331..1710
                     /locus_tag="VLJ38_09040"
     CDS             331..1710
                     /locus_tag="VLJ38_09040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39702.1"
                     /translation="MLKSKWAIGGALLGASIAACSSKTTDVFQCKIGGPDCSCRADES
                     CADGLVCNSHHLCVKSEFANAGQGNAGRSSGGATSRGGQGGSTNAAGRQNAGRAGETA
                     SGASGGTNGTSGDAGAGGEPGTTETGGQPDQSTGGGGGLSGGSGMTARGGARSRGGAR
                     SLGGASSGGAGAVSGAGGIGGLGNVAGMSGASGVGAMSGAGGIGGVGGIGGIGGVGAT
                     GTGATAGLGGFSGKAGAGGRGGSGGASGTCTEISLPSTMWLRDVSQAPDLVAYDYRIN
                     AIGGSSPDYVYVEFYGPSFDPIYDGDKKGSFTLGSGKEANFETCARCVLAEQDSGGSG
                     DALFFASGGTMVIASGSDQMHGFPTVTFTDVTLVEVTLDDTTSASTPVPNGRCLHLAS
                     GSMSFPSGWTCDPDYYAADDGCDCGCGVRDGDCTNGTVNACEFCHCSGDQADCSITSV
                     RSTNNALCQ"
     gene            1785..>2186
                     /locus_tag="VLJ38_09045"
     CDS             1785..>2186
                     /locus_tag="VLJ38_09045"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HSU39703.1"
                     /translation="MVCGQLWVAGLVGLGLLACSSVGPTSPSGSEQEDVVGGQNDSTH
                     QAVFGIVIKNQALCSGTLLAPNLVLTARHCVSDLSTGDNVIDCTQSTFLPKYAASSFV
                     LSYAADLTGTVAQASIFEVSDVRVPGATQFCG"
BASE COUNT          362 a          700 c          796 g          328 t
ORIGIN      
        1 aggcgggtgg acgcgccgct cgatcctgaa cgtcgcgctt tcggggcgat tttcgagtga
       61 tcgcacgatc ctcgggtacg cgcgtgacgt gtggggcgtg tacgtgcctc ctcctcagcc
      121 gggccgcggg cgcaccatct ccgcggcgcc gccgcacgac gcggatgccg tcgctgaaat
      181 gccgccgagc gtgctccgct acagcgagtg aatgtcgagg tagcgcgcgt taagttgagt
      241 cagagcgcgt gaaacggcag tccgcgcttt ccgaaagcgt gagagttcgt tagtgtgcgg
      301 tttccgacta ccgtcgggtg gagagaaccg ttgcttaaat ccaagtgggc catcgggggg
      361 gcactcttgg gcgcgtcgat cgccgcgtgc tccagtaaga cgaccgacgt atttcagtgc
      421 aagatcggtg gtcccgactg cagctgccgc gcggacgaaa gctgcgcgga cggcctcgtc
      481 tgcaatagcc accacctctg cgtgaaatcg gagtttgcga acgcgggcca agggaacgcg
      541 ggccgaagta gcggaggcgc gacgtcgcgt gggggccaag gcgggagcac gaacgcggcc
      601 ggacgccaaa acgcgggccg cgcaggcgaa acggcgtccg gcgcgagcgg cggcacgaat
      661 ggcacgagcg gtgacgccgg cgccggcggt gagcccggaa cgacggaaac cggcggacaa
      721 cccgaccaat cgacgggcgg cggcggcggg ctgagcggcg gcagcggcat gacagcgcgc
      781 ggcggcgcgc gcagccgcgg cggcgcgcgc agtcttggcg gcgcatcgag cggcggcgcc
      841 ggcgccgtga gcggcgcagg cggcattggc gggctcggca acgttgccgg gatgagcggc
      901 gcgagcggcg tcggcgccat gagcggtgcg ggcggcatcg gcggcgtcgg cggtatcggc
      961 ggtatcggcg gcgtcggcgc gacgggaacg ggcgcgacgg cgggactcgg cggtttcagt
     1021 ggcaaagctg gcgcgggcgg tcgcggcggc agcgggggcg cgagtgggac ctgcacggaa
     1081 atcagcctgc cctcgacgat gtggctgcgc gacgtgagtc aggcgccgga cttggtcgct
     1141 tacgactacc gcatcaatgc catcggcggc tcgagccccg actacgttta cgtcgagttt
     1201 tacgggccga gcttcgatcc gatttacgac ggcgacaaga aaggctcgtt cacgctcggc
     1261 tcgggcaaag aggcgaactt cgagacgtgc gcgcgctgcg tgctggcgga gcaagacagc
     1321 ggcggcagcg gcgacgcgct cttcttcgcg agcggcggca cgatggtcat cgcgagcggc
     1381 tccgaccaaa tgcacggctt cccgacggtt acgttcaccg atgtgacact cgtggaagtc
     1441 acgctcgacg acacgacgag cgcctcgacc ccggtcccga acggacgctg cctacacctc
     1501 gcgagcggca gcatgagctt cccgagcggt tggacgtgcg accccgacta ctacgccgcc
     1561 gacgacggtt gcgactgcgg ctgcggcgtg cgcgacggcg actgcacgaa cggcaccgtc
     1621 aacgcctgtg agttctgcca ctgctcgggt gaccaagccg actgctcgat cacgagcgtt
     1681 cgctcgacga acaacgcgct ctgccagtaa acccgctcgg tcagtaccgc gcggcgccgg
     1741 accctgcgca ctaaaaaccc aaggcatgct aggctgtgcg gttcatggtg tgtggtcagc
     1801 tgtgggtcgc cgggctcgtg gggctcgggc ttctcgcttg ctcgagcgtg ggaccgacct
     1861 cgccaagcgg cagcgagcaa gaggacgtcg tcggcggcca gaacgacagc acgcaccagg
     1921 ccgtcttcgg catcgtgatc aagaatcagg cgctctgtag cggcacgctg ctcgctccga
     1981 acctggtcct cacggctcgc cactgcgtct ccgatctcag caccggcgac aacgtgatcg
     2041 attgcacgca gtcgaccttc ttgccgaagt acgccgcctc gagcttcgtg ctctcctacg
     2101 cggccgatct cacgggcacc gtcgcgcaag cttcgatttt cgaggtgagc gacgtgcgcg
     2161 tgcccggcgc gacgcaattc tgcggc
//
LOCUS       DATIML010000521         1813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3855182, whole genome shotgun sequence.
ACCESSION   DATIML010000521 DATIML010000000
VERSION     DATIML010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3855182"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..1117)
                     /locus_tag="VLJ38_09050"
     CDS             complement(8..1117)
                     /locus_tag="VLJ38_09050"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HSU39704.1"
                     /translation="MTPGTPPSKYVKVDVSPARVARAWAGISSRLEAAPRAGRRFASR
                     GAALAVLGGAALTLVLYVVGERHGRSVWPRAALETASDAMAVALDDGSRVELAAQTKV
                     RVSGKEPLSLALELEHGRVDCDITPRPGRHFTVSAAGVEVRVKGTRFGVELAPARDRV
                     EVDVSRGLVEVTLKNGAERRELAAGEHWSIDLAQPTATNEPPAAPSLAATKSGAASAS
                     AEPVANAPPASDGAPAAAPHASAPRAAPGARELLDLGNAARRAGDIAGATHAYEELLS
                     AHPTDPRAGLAAFELGRLRMDRLGDVQGALSALQKAVSLAPGAGFREDAMARLVEAYA
                     AAGALERCRSAQRAYSKSYPGGVHATAVARQCGTQ"
     gene            complement(1119..1646)
                     /locus_tag="VLJ38_09055"
     CDS             complement(1119..1646)
                     /locus_tag="VLJ38_09055"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39705.1"
                     /translation="MLAARAGELWAQEALFQRYARQVLALAQRVLAGRDDADDLAQDA
                     FVYAFTRLDTLHNPQAFQAWLRSIVVRTASKRLRRQRLLTRLGLRRSEPIEPDSVIAA
                     DAPPDIAAELRAVYGLIERLPAEERVALVLRRVEGMELSEIAEEMKLSLATVKRRLSA
                     AEGRLERARARKGAF"
BASE COUNT          259 a          654 c          635 g          265 t
ORIGIN      
        1 ccggctttca ttgcgtgccg cattgtcgcg cgactgcggt cgcgtgaacg ccgcccgggt
       61 agctcttcga gtacgcccgc tgtgccgagc ggcaacgctc gagagcacct gctgccgcgt
      121 aggcctcgac cagccgcgcc atggcgtctt cgcgaaaacc cgccccgggc gcgagggaca
      181 cggctttctg cagcgccgat agcgcgccct gcacgtcgcc caagcgatcc atgcgcagtc
      241 gcccgagctc gaaagcggcg agtcccgcgc gcggatcggt gggatgtgcg gaaagcagct
      301 cttcgtaggc gtgagtcgca cccgcgatat caccggccct gcgcgcggcg ttgccgaggt
      361 cgagcagctc gcgggcgccg ggcgcagccc ggggtgcgct cgcgtgcggc gcggcggcag
      421 gggcaccatc ggaggcgggc ggagcgttcg cgacgggctc ggcgctcgcg ctcgcagcac
      481 cggacttcgt cgccgccaag ctcggagcag cgggtggctc gttggtcgcg gtgggctgcg
      541 ccaggtcgat tgaccagtgt tcaccggccg cgagctcgcg gcgctcggcg ccgtttttca
      601 acgtcacttc gaccaacccg cgcgacacgt ccacctcgac gcggtcgcgc gcgggggcga
      661 gctccacgcc gaagcgcgtg cctttcacgc gtacttcgac gccggcggcg gagacggtga
      721 agtgccggcc cgggcgcggc gtgatgtcgc agtcgacacg gccgtgctcg agctcgagcg
      781 cgagcgagag cggctccttg ccgctcacgc gcactttggt ttgcgccgcg agctctacgc
      841 gcgagccgtc gtcgagcgcg acggccatgg cgtcgctcgc cgtctcgagc gccgcgcgcg
      901 gccacaccga gcgcccgtga cgctcgccca ccacgtacaa cacgagcgtg agcgcggctc
      961 ctccgagcac agccagcgcc gccccgcgcg atgcaaaccg ccggccagcg cgcggtgccg
     1021 cttcgagtcg gctcgatatc cccgcccacg cgcgcgcgac acgcgcgggc gacacgtcga
     1081 ccttgacgta cttcgagggc ggcgtgccgg gcgtcacgtc aaaacgcgcc cttccgagct
     1141 ctcgctcgct cgaggcgacc ttcggcggct gaaagccggc gcttgacggt ggcgaggctc
     1201 agcttcattt cctcggcgat ctccgagagc tccataccct cgacacgccg cagcaccagc
     1261 gcgacgcgct cctctgcggg caagcgctcg atcagaccgt aaacggcgcg gagctcggcc
     1321 gcgatgtccg gcggggcgtc ggcggcaatc acgctgtcgg gttcgatcgg ctcgctccgc
     1381 cgcaagccga ggcgagtgag cagccgttgg cgccgcagcc gcttgctcgc cgtcctgacg
     1441 acgatcgagc ggagccaggc ctgaaacgct tgtgggttgt ggagcgtgtc gaggcgcgtg
     1501 aaggcgtaga cgaacgcgtc ctgggctaga tcgtccgcgt cgtcgcgacc cgccaaaacg
     1561 cgctgcgcta gcgccagcac ttggcgggca taacgctgaa acagcgcctc ttgtgcccaa
     1621 agctcgccgg cgcgtgcggc cagcacgagc gcggcgtccg tcggcccggc gccggaacgc
     1681 gtggtaggcc ccgctacgat caccaccggc catggtgccc gaatcgactt cggcggtctt
     1741 ggtcggacat gaaaagaagc atccggctcc gctacctctt tatgtccccg gaggtcggtc
     1801 cggaagctca gtc
//
LOCUS       DATIML010000522         5286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5590853, whole genome shotgun sequence.
ACCESSION   DATIML010000522 DATIML010000000
VERSION     DATIML010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5286
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5590853"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..694
                     /locus_tag="VLJ38_09060"
     CDS             <1..694
                     /locus_tag="VLJ38_09060"
                     /inference="COORDINATES: protein motif:HMM:NF013104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39706.1"
                     /translation="RIGIVAANTMIAGMSATVAGIIYMWKVYGKPDPSMMCNSMLAGL
                     VAITSPCAFVTPMGAFVIGLIAGVLVIVSVFFFDRLKIDDPVGAISVHGVNGAWGLIA
                     VGLFSDGSYGQGWNGVGATDYLGKAGLGVTGLFYGDSKQLIAQFVETGVGLAWNVVMG
                     GIIFYVVGKVVGGNRVSAEVEIAGLDVPEMGVPGYPEFLPLMTPEKAAEELQAAKASG
                     GVPDFDAAKAAG"
     gene            861..2105
                     /locus_tag="VLJ38_09065"
     CDS             861..2105
                     /locus_tag="VLJ38_09065"
                     /inference="COORDINATES: protein motif:HMM:NF028290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HSU39707.1"
                     /translation="MLPTWTMFPFVGLVLSMAFMPMLWPHAWEKRWFQALVVAACSTP
                     VLWFFLTHGHQAHVALAGSEYVAFIATLGALFVTAGGIYANGDLEATPRTNVLFLLIG
                     SVLASIIGTTGASMLVIRPLLRTNSQRKNTAHLAPFMILAVANAGGLLTPLGDPPLLV
                     GFIGGVPFFWTLRLFPVWLLYVASFAVALYVVDRRAYREESAEALARDRREKKPLEFR
                     GGLNVALLLAIIPAAFLPPGFREIAMFAIAGLSYFLTARDVHALNTFSLAPILEVGLL
                     FAGLFACLVPIELGLAVRAHELPLQKSWQLFWVSGGLSAVLDNAPTYAAFAALGRGLS
                     QGHAHLVAGVDPLMLTAVSAGSVVMGATTYIGNGPNLMVKAIAERSGYALPGFFRYAI
                     FAFLAMLPAHVVMTTAFVLMER"
     gene            2184..2663
                     /locus_tag="VLJ38_09070"
     CDS             2184..2663
                     /locus_tag="VLJ38_09070"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSU39708.1"
                     /translation="MTQDSEPLRNSGEDPEVIVAAVDSSNGATRVIAMAARLARAFPG
                     AALHIVHVFRTSRFDRAHAGAPVANPDALADAKDHLESHVRSSRLQCRNSVTGHFIVG
                     DPTNEILRVRAEIHGDVLVIGTHDHSGFERLLLGSIADNLMRKAGCSVLVVRPTKAR"
     gene            complement(2728..3414)
                     /locus_tag="VLJ38_09075"
     CDS             complement(2728..3414)
                     /locus_tag="VLJ38_09075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39709.1"
                     /translation="MIPAVLVIEDELPMRRVLRSALDGQGYRVWEAGSVEEGLSAFAS
                     RSPQAVLLDLGLPDGEGFQVVERIRETSEVPIVVISARGEERDQVRALDGGANDYVTK
                     PFREAELFARLRAALRSAARATRHAETLTIGPLRIQCFERRVFVDEVEIAMTPTEFSL
                     LQVLARDAGRVITHRQLLRQVWGPTYIDDVQYLRVFMKQLRQKLERDPTRPQLLVTTP
                     GVGYRLRPPE"
     gene            complement(3411..4931)
                     /locus_tag="VLJ38_09080"
     CDS             complement(3411..4931)
                     /locus_tag="VLJ38_09080"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39710.1"
                     /translation="MRRGLIAEPRGYLVGALVTAFTTTLAFNLAAHAALAHVMLIYLL
                     GAVLVATRYGAAVSGFTIAASALCFDYFNIPPVFAFALPDAHSVLTLGGMLLTAVVVC
                     VLLHRLRHQRTAARASEARTLALCELSLDLSEVSRIDELPRVAERHLALLFGPYARVL
                     LRGPGGELAPSTGSSVARELAQRAVAGRELAMLVVDEGVLAFQPIASGREPLGVIGVT
                     LAPAEPAHEHEQRVLLAACADRIAVAIDRLALGAAAHRAHVEVEAERLRNELLSAMSH
                     DLKTPLASILTAGTTLLSPNERADGVRRELLETIVEETERLNRLVTNLLSVTRLESGR
                     VHLNKTPEALDDLVYGVLSRLSGRLEGRSVDIEVPGELPFVLMDPVLVDQVLVNLIEN
                     VLRYTPQGSPLGIRLLASEREVRLEVADRGPGIAREERERVFEKFYRGREARQKDGGS
                     GLGLTICRAVARAHGGRIRIHPREGGGTLVEFALPASGAGVAHRISDFPDQLGVHA"
BASE COUNT          878 a         1766 c         1720 g          922 t
ORIGIN      
        1 ccgcatcggt atcgttgccg ccaacacgat gatcgccggc atgtcggcga cggtcgccgg
       61 catcatctac atgtggaagg tctacggcaa gcccgatcct tcgatgatgt gcaacagcat
      121 gctggccggc ctcgtcgcca tcacctcacc ctgcgccttc gtgacgccga tgggcgcgtt
      181 cgtcatcggc ctcatcgcag gcgtgctcgt gatcgtgagc gtgttcttct tcgatcgact
      241 caagatcgac gacccagtgg gcgcgatcag cgtccacggc gtgaacggcg cctggggcct
      301 catcgccgtc ggtttgttct cggacggcag ctacggccaa ggctggaacg gcgtcggcgc
      361 gaccgattac ctcggcaagg ccgggctcgg cgtgacgggc ctgttctacg gcgacagcaa
      421 gcaactcatc gcgcagttcg tcgagaccgg cgttggtctc gcctggaacg tcgtgatggg
      481 cggcatcatc ttctatgtcg tcggcaaggt cgtcggtggt aaccgcgtgt cggcggaagt
      541 ggagatcgcc ggactcgacg tgcccgagat gggcgtcccc ggctacccgg agttcctccc
      601 gctcatgacg cccgaaaagg cagcggaaga gcttcaggcc gcaaaagcga gcgggggcgt
      661 ccccgacttc gacgcggcga aggctgccgg ctgagttccg cgtgtgagtg aaaggtggcg
      721 cggcgccttc cggcgtcgcg ccactttgat attttggcgt cgaagatgga cgaacatggc
      781 cgcgacgcag agcaccttca acagcatgat cgagagcccc gcggcgctct ccgcccgagc
      841 ttcgcaccgt gaatcacgaa atgcttccca cttggaccat gttcccgttc gtcgggctgg
      901 tgctgtcgat ggccttcatg ccgatgcttt ggccgcacgc ctgggaaaag cgttggttcc
      961 aggcgctcgt ggtcgccgct tgcagcacgc ccgtgctctg gttcttcttg acgcacggac
     1021 accaagcgca cgtggcgcta gccggatccg agtacgtcgc gttcatcgcg acgctcggcg
     1081 cgctgttcgt gacggcgggc ggcatctacg cgaacggtga tctcgaggcg acgccccgca
     1141 cgaacgtgct ctttttgctg atcggctcgg tgctcgcgag catcatcggc acgacgggcg
     1201 cgagcatgct ggtcatccgt ccgctcttgc gcacgaattc gcagcgtaag aatacggcgc
     1261 acctcgcgcc tttcatgatc ttggcggtcg ccaacgccgg cggacttttg acaccgctcg
     1321 gcgacccgcc gctactcgtt ggcttcatcg gcggcgtgcc gttcttctgg accttgcggc
     1381 tctttcccgt gtggctgctc tacgtcgcaa gtttcgcggt cgccctgtac gtcgtggatc
     1441 gacgcgccta ccgcgaggag tcggccgagg cgctcgcacg cgatcggcgg gaaaaaaagc
     1501 cgctcgaatt tcgcgggggc ttgaacgttg cgcttttgct cgcgatcatt cctgccgcct
     1561 tcttgccgcc gggctttcgc gaaatcgcga tgttcgccat cgcggggctc tcctattttt
     1621 tgaccgcgcg cgacgtgcac gcgttgaaca ccttctcgct cgccccgatc ctcgaggtcg
     1681 gcttgctatt tgccggcctt tttgcgtgcc tcgtgccgat cgagctcggt ctcgccgtgc
     1741 gagcgcacga gttacctttg cagaaaagct ggcaactctt ctgggtgtcg ggcggacttt
     1801 cggcggtgct cgacaacgcg ccgacgtatg cggcgttcgc cgcgctcggg cgcggcttga
     1861 gccaggggca cgctcatctc gtcgcaggcg tcgaccccct gatgctgacg gccgtgagcg
     1921 ccggtagcgt ggtgatgggc gccacgacct acatcggaaa cggaccgaat ctcatggtca
     1981 aagccatcgc ggagcgctcg ggttatgcgt taccgggctt ctttcgctat gcgatcttcg
     2041 cttttcttgc gatgctgccg gcccacgtgg tgatgacgac cgcgttcgtc ctgatggagc
     2101 gctagcgtgg acttcgcacc tctcggaccc ccgttttccg aagctcggca gagctcgagg
     2161 ctccgacacc cgaggcatga agcatgacgc aagatagcga accgctacgc aattccgggg
     2221 aagaccccga ggtgatcgtc gccgccgtcg attcctcgaa cggcgcgacg cgcgtcatcg
     2281 ccatggcggc gcggctcgct cgcgcgtttc ccggagcggc cctccacatc gtccacgtgt
     2341 ttcgcacgag tcgtttcgac cgcgcccacg cgggcgcccc cgtcgcgaat ccggacgcac
     2401 tcgccgacgc caaggatcac ctcgagtcgc acgtgcgctc gtcgcggctg cagtgtcgca
     2461 acagcgtgac gggccacttc atcgtcggcg atccgacgaa cgaaatcctc cgggtacgtg
     2521 cggaaatcca cggcgacgtg ctcgtaatcg gcacgcacga tcattcgggt ttcgagcggc
     2581 tactgctcgg ctcgattgcc gacaacctga tgcgcaaggc gggctgctcc gtcctcgtcg
     2641 tgcgcccgac caaagcgcgc tgacgcggcg tgcggcgtgg gtcgcggcgc gtcccgtgcg
     2701 ccgcgtcccg tgcgccacgg cggcgcctca ttcgggcggt cgcagccggt aaccgacccc
     2761 gggcgtcgtg acgagcagct gcggccgcgt cggatcacgc tcgagcttct gcctgagctg
     2821 cttcatgaaa acacgcaggt attgcacgtc atcgatgtag gtcggacccc agacttgacg
     2881 cagaagttgc cggtgcgtga tgacgcgccc ggcgtcacgg gcgagcacct gcagcaagct
     2941 gaactccgtg ggcgtcatcg cgatctcgac ctcatcgacg aagacgcgcc gctcgaaaca
     3001 ttggatgcga agcgggccga tcgtgagcgt ctcggcgtgc cgcgtggcgc gggccgcgct
     3061 gcgcagtgcg gcgcgcagcc gcgcgaagag ctcggcttcg cggaagggct tcgtgacgta
     3121 atcgttcgcc ccgccgtcca gcgcccgcac ctgatcgcgt tcctcaccgc gggccgaaat
     3181 gacgacgatg gggacctccg aggtctcgcg gatacgctcg acgacctgaa atccctcccc
     3241 gtccggcaac ccgaggtcga gtaacactgc ttgcggcgag cgtgacgcga acgcggagag
     3301 cccctcttcg acgctccctg cctcccacac gcggtaaccc tggccgtcga gcgccgagcg
     3361 caagacgcgg cgcatcggca gctcgtcttc gatcacgaga acggcaggaa tcatgcgtgc
     3421 actcccaatt gatcaggaaa gtcggaaatt cgatgtgcga cgcccgcgcc ggaagcgggc
     3481 aacgcgaact cgaccagtgt cccgcctccc tcgcgcgggt ggatgcgaat gcgtccaccg
     3541 tgcgcacgcg ccacggcacg gcaaatggtg agtccgagcc ccgagccgcc gtccttttgc
     3601 ctggcctcgc ggccgcgata aaacttctcg aagactcttt cgcgctcttc acgggcgatg
     3661 ccgggcccgc gatccgcaac ttccagcctg acttcgcgtt ccgaggcgag caggcgaatg
     3721 ccgagcggtg agccctgcgg cgtgtagcgc aggacgttct cgatcagatt cactaggacc
     3781 tgatcgacga gcacggggtc catcagcacg aacggcagct cgccgggcac ttcgatgtcg
     3841 acgctcctgc cctcgagccg tcccgaaagg cgcgacaaca cgccgtagac gaggtcatcg
     3901 agcgcttcgg gcgtcttgtt caagtgcacc cggcccgact cgagcctcgt tacgctgagt
     3961 agattcgtga cgaggcgatt gagccgctcg gtctcctcga cgatggtctc gagtagctcg
     4021 cggcgcacgc cgtcggctcg ctcgttcgga ctcaagagcg tcgtgcccgc ggtgaggatc
     4081 gacgcgagcg gcgttttcag atcgtgcgac atcgcgctca agagctcgtt gcggaggcgt
     4141 tcggcttcga cttcgacgtg tgcgcgatgg gcggcggcgc cgagagcaag ccggtcgatg
     4201 gcgacggcga tgcgatcggc gcaagctgcg agcaacacgc gctgctcgtg ttcgtgggcc
     4261 ggctcggcgg gcgcgagcgt gaccccgatg acgccgagcg gttcccgtcc gcttgcaatc
     4321 ggctgaaacg cgaggactcc ctcgtcgacg acgagcatcg cgagctcacg cccggcgacc
     4381 gcgcgctgcg ccagctctcg cgcgacggac gagcccgtcg acggcgccag ttccccgccc
     4441 gggccgcgca agagcacgcg cgcgtatggc ccgaagagga gcgcgagatg tcgctcggcg
     4501 acgcgcggca actcatcgat gcgtgacacc tcggataaat cgaggctgag ctcgcagagc
     4561 gccagcgtgc gcgcctcgct cgcgcgtgcc gccgtacgct ggtgacgaag ccgatgcagg
     4621 agcacacaga cgacgaccgc ggtgagcaac atgccgccca gggtgagcac gctgtgagcg
     4681 tccggcagcg cgaacgcaaa cacgggcgga atgttgaaat agtcgaaaca cagcgcgctc
     4741 gccgcaatcg tgaagcccga gacggccgcg ccgtagcgcg tcgcgacgag cacggcgccc
     4801 agcaaataga tcagcatcac gtgcgcgagc gccgcgtgcg cggcgagatt gaacgcaagg
     4861 gtcgtggtga acgccgtcac gagcgcgccg accaaatacc cgcgcggctc ggcgataagc
     4921 ccgcgcctca ctgcgatgaa gcgagaacgc cagcgcctcc tgagcaggga gtgcggagct
     4981 tcatccatat ccttcgattg taatcgagcg gcagcgtgac gcccacgtga tcgaaccctc
     5041 attcttacgg catcgagccg aaagcgaagt gtcgttgcgg cgcgttacac gcaagcaatc
     5101 aacacgaaac acgtgaagaa acactcccga agcgagctcg tgcctactga cagctccccg
     5161 ggacaggccc gcgcaaccgc gtcgtcgccc tgcgctgccg tgctcagttt cgcggatcgg
     5221 gcgcaagcga ccgtgagggg ccgagcaagc gctcgaggtg tgcgagccgc tgcacgagct
     5281 caccct
//
LOCUS       DATIML010000523         3112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2701601, whole genome shotgun sequence.
ACCESSION   DATIML010000523 DATIML010000000
VERSION     DATIML010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3112
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2701601"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VLJ38_09085"
     CDS             complement(<1..410)
                     /locus_tag="VLJ38_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39711.1"
                     /translation="MSVRVPCRTTALSHPDRGPNSVCGHLPGVARRSQSGLRMLGPIL
                     TAGWLTAGCIVPEAPEYGPPRQTPVFVEADSIFPNPRSMQRYTNAEGNQAEFRMNVRS
                     EDASDDLVSVLYLDYKHKNVHYIDHKTYKPQSFD"
     gene            complement(407..>3112)
                     /locus_tag="VLJ38_09090"
     CDS             complement(407..>3112)
                     /locus_tag="VLJ38_09090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39712.1"
                     /translation="ALARQTGERERQAWALGRLLDTAADAAPDGVRLRELAPLLEALG
                     DEQGALARWSALAELEPNDPDALAALERDAERRGDYEAVVKLVDRRAALAESAEEVRQ
                     LRLRRAGVLEQRLGRPDEARAELEQLVTATGDHLGVLCMLADLDERLGDHLAAAPLWL
                     RASGLASERVEAAELARRACEAYLAGGDIESAHRTIEGMGAWVERAKLLELGVEIERR
                     RENPAGLADALDELASQTERGAAERAGLLVEAARAGLAAGDSERALERARRAARAAPE
                     HVEAQLLARKLEYLARGPGSAEDARATIGELERLPAELAPEAGELRSFLLAEALECVD
                     GATGGLAELEREVAARGLRPLLALGIAERFAALGRTPEALEHFELALAGELYGLRSRA
                     RTALLAGETARRAGEYERARAYLEQAALDSETQAAARTALEHLRVERASREARPPTLD
                     IEELSPNAAADLLDDGRPIREHVVLDQDQDEDQDLGLLPIPLVTTAPEPRIESVKPQA
                     PATETPLPPVDSSKPPSPRKPQLSGTFAGNSAEEVSLHVALADGSEAAGRELLTLLAG
                     DPARAHDRVAVCRRLVQLAPGNRELLAELAHAARDDRNLAYAAAVEHVLAVLRGEAPP
                     APPPLDELDVQPDAVKNLLFRETQSPTLEALACVWETAGHLFRRDPGAYGITGLERVQ
                     ATARTALAKVYGDAARALGALRTPLYQRRTAGPVTIGIALLATPSVVLSGDVAEETPE
                     LAFHLGAMLAGSAPQLVMLFGLPEAQARSVLRALAFAFGPARPDASGIGPALNLAEML
                     WESIPARPQRRLRELCHDVDALDYDQAMAQARTAVRRAGLFAAGQFGVAVNEINNEDR
                     LAPLLLTAEDGMARLVAESPSIQSLYQLALGAEYAETRWREGLKR"
BASE COUNT          437 a         1081 c         1124 g          470 t
ORIGIN      
        1 tgatcgaagg actgcggctt gtaggttttg tgatcgatgt agtggacgtt tttgtgtttg
       61 tagtcgaggt aaagaacgga gacgaggtcg tcactggcgt cctccgaacg gacattcatg
      121 cgaaactcgg cctggttgcc ctcggcgttc gtgtagcgct gcatgctccg cgggttcgga
      181 aagatcgagt ccgcctcgac gaagacggga gtttgacgcg gcgggccgta ttcgggcgcc
      241 tcgggcacga tgcaaccggc cgtgagccaa ccggccgtga ggatgggacc gagcattctg
      301 agcccgcttt gcgaccttcg tgccacgccg ggcaaatgcc cgcagacgct gttcggaccg
      361 cggtcggggt gtgacagggc tgtcgtacgg cacggcaccc ggacgctcat cgcttgagac
      421 cctcgcgcca gcgggtctcg gcgtattcgg cgccgagcgc gagttgatac aggctttgga
      481 tggacgggct ttcggccacg aggcgagcca tgccgtcctc ggcggtgagc agcagcggag
      541 cgagtcgatc ctcgttattg atctcgttca cggcgacacc gaattgtccg gccgcgaaca
      601 gccctgctcg gcgcaccgcc gtgcgtgctt gcgccatggc ctgatcgtaa tcgagggcgt
      661 ccacgtcgtg gcagagctcg cgcagccggc gctgcggtcg ggcaggaatg ctttcccaca
      721 gcatctcggc gaggttcagc gcgggaccga tgccgctcgc gtcgggacgc gcgggcccga
      781 aggcgaaagc gagcgcgcga agtaccgagc gagcctgagc ttcgggcaaa ccgaagagca
      841 tgacgagctg aggcgcggac ccagccagca tcgcaccgag atggaacgca agctcggggg
      901 tctcctccgc gacgtcgccc gacaggacga ccgacggcgt cgcgagcaga gcgataccga
      961 tcgtgaccgg gcccgccgtg cggcgctggt agagcggcgt gcgtaacgcg ccgagcgcac
     1021 gcgccgcgtc gccgtacacc ttggcgagcg cggtccgcgc agtcgcttgc acgcgttcga
     1081 gcccggtgat gccgtacgcg ccggggtcgc ggcggaagag gtgtccggcg gtctcccaaa
     1141 cgcaggcgag cgcttcgagc gttggactct gcgtctcacg aaataggagg tttttcacgg
     1201 cgtcgggctg cacgtcgagc tcgtcgagcg gcggcggcgc gggcggcgcc tccccgcgca
     1261 gcacggcgag gacgtgttcg accgcggcgg cgtacgcgag attgcgatcg tctcgcgccg
     1321 cgtgcgcgag ctcggcgagc agctcgcgat tgcccggcgc gagctggacg aggcgacgac
     1381 acaccgcgac gcggtcgtgc gcgcgcgccg gatcgcccgc gagcagggtc aagagctcgc
     1441 gacccgccgc ctcggagccg tcggcgagcg cgacgtgcag gctgacctcc tcggccgagt
     1501 tgcccgcgaa agtacccgaa agctgtggct tgcgcgggct cggtggcttg ctcgagtcca
     1561 cgggcggcag cggcgtctcc gtggcgggcg cctgcggctt caccgattcg atacgcggtt
     1621 cgggcgcggt cgtgacgagc gggatgggca gcaggcccaa atcctggtcc tcgtcttggt
     1681 cctggtcgag cacgacgtgc tcgcggatgg gccgcccgtc gtcgagcaga tcggcggcgg
     1741 cgttgggcga gagttcttcg atgtcgagcg tgggcggccg cgcttcgcgg ctggcgcgct
     1801 cgacacgcag gtgttcgagc gcggtccggg ccgctgcttg cgtctcgcta tcgagcgccg
     1861 cctgctcgag gtacgcccgt gcccgctcgt attcgccggc tcggcgcgcg gtttcgccgg
     1921 caagcagagc ggtgcgcgcg cgcgagcgca gaccgtagag ctcgccggcg agcgcgagct
     1981 cgaaatgctc gagcgcttcg ggcgtgcgcc cgagcgccgc gaaccgctcg gcgatgccga
     2041 gcgccaagag cggccgcagc ccccgcgccg ccacctcacg ctcgagctcc gcgagaccgc
     2101 ccgtcgctcc gtcgacgcac tcgagcgctt ccgccagcag aaaactacga agctctcccg
     2161 cttcgggggc gagctcggcc ggcagccgct cgagctcgcc gatggtcgcc cgcgcgtcct
     2221 ccgccgaacc aggaccgcgt gcgagatact cgagcttgcg cgcaaggagc tgggcttcga
     2281 catgctcggg cgcggcgcgg gccgcccggc gcgcgcgctc gagcgctctt tcggagtcgc
     2341 ccgcggcgag cccggcgcgc gccgcttcga cgagtagccc ggcgcgttcg gcggcaccgc
     2401 gctccgtctg cgatgccagc tcgtcgagtg cgtccgcgag acctgccgga ttttcgcgcc
     2461 tgcgctcgat ctcgacgccg agctcgagca gtttcgcgcg ttcgacccag gcgcccatgc
     2521 cttcaatcgt gcggtgcgcg ctctcgatgt cgccaccggc gaggtaggcc tcacacgcgc
     2581 gacgggcaag ctccgccgct tccacacgtt cactcgcgag cccactcgcg cgaagccaga
     2641 gcggcgccgc ggcgaggtgg tcgccgagcc gttcgtcgag atcggcgagc atgcagagga
     2701 cgcccaggtg gtcgcccgtc gcggtcacga gctgctcgag ctcggcgcgc gcctcgtccg
     2761 gacgccccag acgctgctcg agcacgccgg cacgccgcaa ccggagctgc cgcacttctt
     2821 ccgcgctttc cgcgagcgca gcgcgccgat cgacgagctt gaccacggct tcgtaatcgc
     2881 cacgccgctc cgcatcgcgt tcgagggcgg cgagcgcgtc cggatcgttc ggctctagct
     2941 cggcgagcgc ggaccagcgc gcaagcgcgc cctgctcgtc accgagggcc tcgagcagcg
     3001 gcgcgagctc ccgcaaccgt acgccatctg gcgcggcgtc ggcggccgtg tctagcagcc
     3061 gaccgagcgc ccaggcttgc cgctcgcgct cacccgtctg acgcgcgagc gc
//
LOCUS       DATIML010000524         2173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4434100, whole genome shotgun sequence.
ACCESSION   DATIML010000524 DATIML010000000
VERSION     DATIML010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4434100"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..2166
                     /locus_tag="VLJ38_09095"
     CDS             187..2166
                     /locus_tag="VLJ38_09095"
                     /inference="COORDINATES: protein motif:HMM:NF016946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HSU39713.1"
                     /translation="MRPKQSVGDFIQARYFTADARFLGVFRIGFGALLTWDGLRRFEG
                     AREYYSNDGFLPNHFALFRPMGDGVFSLLHAFSSLAEVRCVMAVMLAVFVCYTLGFCT
                     RLAQILAFVSITSLDARDLFVENGGDVLVNVMAAITMFFPLGRRFSVDAVLASLRARK
                     ETGPEALNDRSRPPLPDNTFVSLVVLLSFLQLATIYFFNAVHKSGVGWHNGSAIWWFL
                     QQDRIVTHLGIFIREHVPYPVMRAFCYNALGIEFSLPWILLFPFFRTWMIRLAFLLGV
                     GLHGGIALTSRLGPFSYAMLLFYVLLLGAADARLASRWFGRASRRRTVVFDVDCGICL
                     LICRVLKRLDPCERLTFVGNDRAEALPPGVDLATAERSVVVVDADGRIHLEERAVFEI
                     ARALPFGVLSCFWLRVPGLAELGRAGYRAVARRRLEISSWFGLGACGLGPRAEAPDSL
                     IEPEKPATFRAAQSGLYAFARETLVAIMLVMLVIQAANDNQWLNRRVHVRRPEWVVRT
                     VNTFRILEGWGMFAPEPPYDDGHVVVDARTKDGRKLDPFTLAPPDFDPYTRTGWGHEQ
                     FWCDYNNRIRFDFHVPNRQHLRDYLRHWHEYAGRPQDELVAFDVWWVNDKSPPPGEER
                     PVPLPPQKLVSFGYVSDSLAAPWLNPPQPPTTRMQ"
BASE COUNT          310 a          732 c          689 g          442 t
ORIGIN      
        1 cattggtgcc gaaggcggga gagcctaccc cagacggccc agccgctgct agagtgccgc
       61 ggcgcggcat gggacctcac gcggaggttc gctgtctcgg ctcgatccca cgtgccgagc
      121 gtgcaaagcc cgtcctagcg tagcaaactc gagacctgcc caatcgtgga aaaagagagc
      181 cgtgatgtga ggccgaagca gagcgtcggg gacttcatcc aggcgcgtta tttcacggcc
      241 gatgcccgct ttctgggcgt gtttcgcatc ggcttcggag cgctcctgac ctgggacggc
      301 ctccggcgct tcgagggtgc tcgcgagtac tactcgaacg acggctttct accgaatcac
      361 ttcgcgctgt ttcgtccgat gggggacggc gtgttctcgc tcttgcacgc gttctcgtcg
      421 ctagccgagg ttcgctgcgt gatggcggtg atgctcgccg tcttcgtctg ttacacgctc
      481 ggcttttgca cgcgcctcgc gcagatcctc gcctttgttt cgatcacgag cctcgacgct
      541 cgcgatctgt tcgtcgagaa cggcggcgac gtgctcgtga acgtgatggc agcgatcacg
      601 atgttcttcc cactcggtcg acgtttcagc gtcgacgccg tcctcgcttc gctgcgcgcg
      661 cgcaaggaga cgggcccgga ggcgctgaac gatcgctcgc ggccaccgct gcccgacaac
      721 accttcgtct cgctggtcgt gctgctttcg ttcttgcaac tcgcgacgat ttactttttc
      781 aacgccgtgc acaagagcgg tgtcggctgg cacaacggct cggcgatttg gtggtttctg
      841 cagcaagacc gcatcgtcac gcacctcggc atcttcatcc gcgagcacgt gccgtacccg
      901 gtgatgcgtg cgttttgtta caacgcgcta ggcatcgagt tttcgctgcc ttggattttg
      961 cttttcccct tcttccgcac ctggatgatc cggctcgcgt tcttgctcgg cgtcggactc
     1021 cacggcggga ttgccctcac gtcgcggctc ggccccttct cgtacgcgat gctgctcttt
     1081 tacgtgctgc tcctcggcgc agccgacgcg cgtctcgcaa gtcgatggtt cggccgcgcg
     1141 tcgcgccggc gcaccgtcgt gttcgacgtg gactgcggca tctgcctgtt gatatgccgc
     1201 gtcctcaagc ggctcgatcc gtgcgagcgt ctcacgttcg tcggcaacga tcgcgccgag
     1261 gcgctgccgc cgggcgtcga cctcgccacg gccgaacgca gcgtggtcgt cgtcgatgcg
     1321 gacgggcgca ttcatctcga ggagcgcgcc gtgttcgaga ttgcgcgcgc gctgccattc
     1381 ggggtccttt cgtgcttctg gctgcgcgtg cctgggctcg ccgagctcgg gcgcgcgggg
     1441 tatcgcgccg tggcgcgccg ccgcctggag atctcgagct ggttcggcct cggtgcgtgc
     1501 ggcctggggc cgcgcgccga ggcgccggac tctctgatcg agcccgaaaa gccggcaacc
     1561 tttcgcgccg cgcagagcgg gctgtacgct ttcgcgcggg agacactggt cgcgatcatg
     1621 ctcgtgatgc tggtgattca ggcggccaac gacaatcagt ggctcaatcg ccgggtgcac
     1681 gttagacgcc ccgagtgggt cgtgcgcacc gtcaacacgt tccgtatcct cgagggctgg
     1741 ggcatgttcg cgcccgagcc tccgtacgac gacggtcacg tcgtggtgga cgctcgcacc
     1801 aaggacggcc ggaaactcga ccccttcacg ctggccccgc ccgatttcga tccctacacg
     1861 cgcacgggtt gggggcacga gcagttttgg tgcgattaca acaaccgcat tcgtttcgac
     1921 tttcacgtac ccaatcgcca acacctgcgc gactacctgc gtcactggca cgagtacgcc
     1981 gggcgcccac aagacgagct cgtcgccttc gacgtgtggt gggtgaacga caaatcaccg
     2041 ccacccggtg aggagcgccc cgtgcccctg ccgccgcaga agctcgtgag cttcggctac
     2101 gtctcggact cgctcgccgc gccctggctc aaccctcccc agccgccgac aacgaggatg
     2161 cagtgagcga gcc
//
LOCUS       DATIML010000525         2157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4145547, whole genome shotgun sequence.
ACCESSION   DATIML010000525 DATIML010000000
VERSION     DATIML010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4145547"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..570
                     /locus_tag="VLJ38_09100"
     CDS             <1..570
                     /locus_tag="VLJ38_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU39714.1"
                     /translation="DADLVILDLMLPDGSGFEWISALRSERRDQPIIVLSSRDGEADR
                     VAALETGADDYVTKPFSPREIVARVRAVLRRSVASAPPSASASAPAVELDEMARRAWV
                     GETALELTRVEFDLLATLRGGPERVHTRADLIDRVWGDGFAITDRTIDSHVKALRRKL
                     AEAGADPSTIETVRGVGYRLGPGSNGSGA"
     gene            567..2054
                     /locus_tag="VLJ38_09105"
     CDS             567..2054
                     /locus_tag="VLJ38_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39715.1"
                     /translation="MIRLVAVAAGAVLLILFVAFVVSRLLRTRSRGMSIRMQVFLALA
                     LIVGTFAFGLGIMVLDRIEARAVRLATQAATDEAAAIAGIMAGELDRSGNRIDVIARR
                     LEGERAHGADLRMELLDRDERRVFPRSAPALEPGSVSVQAPIVVRGSREGFVRVIKTA
                     VAMRGLLTDFAPTVLLISAVLGAAAALAAAWIGRAIAQPIEALNTFSKRVSEGELGAT
                     PPPVYGRELMNLVRSLDSMRRQLEGRPFVEAFAADLSHELKNPVAAIRASAEVLEESA
                     LDEPAEARRFVGRIREATARIERLLSELLSLARIEARGAEAFEPVDVGKVAEKTLDAL
                     GDTRTRVALATGGNAFVRGDEQWLGRALSNLIDNGLTHSEPDSPVKVDVRRDGALVRV
                     SVKSTGGVAAAIRTRLFRRFVTARSDRGGTGLGLAIVRAIAEAHGGRAELITPGPPEV
                     EFRLTLPAAWRSPGEQLREAVSEARESLGNIARDESPKISINTDT"
BASE COUNT          328 a          813 c          692 g          324 t
ORIGIN      
        1 gacgccgatc tcgtgatttt ggatttaatg ctgccggacg gcagcggctt cgaatggatc
       61 agcgcgctcc gctccgagcg ccgcgatcag cccatcatcg tgctctcgag ccgcgacggt
      121 gaggcggatc gcgtcgccgc cctcgagacc ggcgccgacg actacgtcac caagccgttt
      181 tcgccgcggg agatcgtcgc gcgcgtgcgc gccgtgctcc gccgttccgt cgcatccgcc
      241 ccgccgagcg ccagcgccag cgcgcctgcc gtcgagctcg acgaaatggc ccgccgcgcc
      301 tgggtgggcg aaaccgcgct cgagctcacc cgcgtggagt tcgacctgct cgcgaccttg
      361 cgcggcggcc ccgagcgcgt ccacacgcgc gccgatctca tcgatcgcgt ctggggcgac
      421 ggcttcgcca tcaccgatcg caccatcgac tcccacgtca aagcgctacg ccgcaaactc
      481 gccgaagccg gcgccgatcc gagcaccatc gagaccgtgc gcggcgtcgg ttaccgcttg
      541 ggcccgggtt cgaacgggag tggcgcgtga tccgcctcgt cgccgtcgcg gccggagccg
      601 tgctcctcat cctcttcgtc gcgttcgtcg tctcgcgcct cttgcgcacg cgctcgcgcg
      661 gcatgtcgat tcgcatgcag gtgttcttgg cgctggcgct catcgtcggc accttcgcct
      721 tcggcctcgg catcatggtg ctcgaccgca tcgaagcgcg cgccgtgcgc ctggcgacgc
      781 aagccgcgac cgacgaagcc gccgccattg ccggcatcat ggcgggcgag ctcgatcgca
      841 gcggtaaccg catcgacgtc atcgcgcggc ggctcgaggg cgagcgcgcg cacggcgccg
      901 atttacgcat ggaactcttg gatcgcgacg aacgccgcgt cttcccgcgc tcggcgcccg
      961 cgctcgagcc cggcagcgtg agcgtccagg cgcccatcgt cgtgcgcggc tcgcgggaag
     1021 gcttcgtgcg cgtgatcaag accgccgtcg ccatgcgcgg cttactcacc gacttcgcgc
     1081 ccacggtgct gctcatcagc gccgtgctcg gtgccgcggc cgcgctcgcc gccgcctgga
     1141 tcggccgcgc catcgcgcaa ccgatcgaag ccctcaacac cttcagcaaa cgcgtgagcg
     1201 aaggcgagct cggcgcgacg ccgccgcccg tctacggccg cgagctcatg aacctcgtgc
     1261 gctcgctcga ctccatgcgc cgccagctcg aaggccgccc cttcgtcgaa gccttcgcgg
     1321 ccgatctctc gcacgagctc aaaaatccgg tggccgccat ccgcgccagc gccgaagtgc
     1381 tcgaagagag cgcgctcgac gaacccgccg aagcgcgccg cttcgtggga cgcatccgcg
     1441 aagccacggc tcgcatcgag cgcctgctct ccgagctcct gagcctcgcg cgcatcgaag
     1501 cgcggggcgc cgaggcgttc gagccggtgg acgtggggaa ggtcgcagaa aaaacgctgg
     1561 atgcactcgg agatacccgt actcgggtgg cactcgcgac gggcggcaac gccttcgtcc
     1621 gcggcgacga gcagtggctc ggccgcgcgc tctcgaacct gatcgacaac ggacttaccc
     1681 attcggagcc ggactcgccc gtcaaagtcg acgtgcgccg cgacggcgcg ctcgtgcgcg
     1741 tttcagtgaa gagcaccggc ggcgtcgctg ccgcgattcg cacgcgcctg tttcggcgct
     1801 tcgtcaccgc ccgctccgat cgcggcggca cggggctcgg cctcgcgatc gtgcgcgcca
     1861 tcgccgaagc gcacggcggg cgcgcggagc tcatcacgcc aggcccaccc gaagtcgagt
     1921 ttcgcctcac gctaccggcc gcgtggcgga gcccgggcga acaactgcgc gaagccgtga
     1981 gcgaagcgcg cgagagcctc ggcaatatcg cgcgcgacga atcaccaaaa atatccatta
     2041 atacagatac ttaacccaca acgacgcgtc tggcgaaacc cggcgcgcgc ttgccggaaa
     2101 ccgcgcccgc tgcacgctcg ccccgacttt ctccatcaaa tctccaccgt ttcgaag
//
LOCUS       DATIML010000526         8184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_393882, whole genome shotgun sequence.
ACCESSION   DATIML010000526 DATIML010000000
VERSION     DATIML010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8184
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393882"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1033)
                     /locus_tag="VLJ38_09110"
     CDS             complement(<1..1033)
                     /locus_tag="VLJ38_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013202337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HSU39716.1"
                     /translation="MKTRAAVAFEAGKDLVIEQVELEGPKAGEVLVQLKATGICHTDE
                     FTRSGADPEGLFPVIFGHEGAGVVVDVGAGVTSVERGDHVIPLYTPECRACKSCLSRK
                     TNLCTAIRATQGKGVMPDGTSRFSIGKTKVHHYMGCSTFSEFTVLPEIAVAKVRKDAP
                     FDKICYIGCGVTTGVGAVINTAKVEPGANVVVFGLGGIGLNVVQGARLAGADLIIGVD
                     INDRRAELGRKFGMTHFVNPSELKGDLVAHLVALTGGGADYSFECVGNVELMRQALEC
                     CHRGWGVSVIIGVAGAGREISTRPFQLVTGRVWKGTAFGGARGRTDVPKIVDWYMDGK
                     IDIDSLITHK"
     gene            complement(1095..1385)
                     /locus_tag="VLJ38_09115"
     CDS             complement(1095..1385)
                     /locus_tag="VLJ38_09115"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSU39717.1"
                     /translation="MFVIELTYKADLSEIDAHMRAHMAFLKKYYDAGTFLISGRKIPR
                     DGGIILAVGPTRERVEAIVREDPFYTQGLADFRVIEFRASQRADDVPKRVEG"
     gene            1699..2721
                     /locus_tag="VLJ38_09120"
     CDS             1699..2721
                     /locus_tag="VLJ38_09120"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HSU39718.1"
                     /translation="MDTAGNTGGGRGGAGSAGQPPGGRAGANVGGRSSGGGSDSGRTG
                     TAGIRDETAGDSGAGGAGGAETTDYDAAVLADGPVMYLTMSGETNEPDRSGNGHDGSY
                     RGGAPARAPLPNGDRAAGFDGVKQYLTVPSAAALSIPTTHELTWEAWIRPDVLQFPHA
                     TNGYVDWMGKCEEYAPTCEWEARLYSLTNSEDRCNRLSAYAFNPDGDLGSGAFWQQAD
                     CGVSIVAGDWYQVVGEYTTLAQPASCSETGSYPGVIEIWVNGVRWNQASHGQTGCMSQ
                     YQVVPVANDSPLNVGTMAHDAWFAGAVGKLAIYDKLLGADAIARHYQVMTGRQPTGSC
                     ADTCSF"
     gene            2770..3525
                     /locus_tag="VLJ38_09125"
     CDS             2770..3525
                     /locus_tag="VLJ38_09125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39719.1"
                     /translation="MDPRTRALLRRLGRVAGRATLGFFTVSVAWIVLALHPEPLFAYT
                     TTRANVTLHARAPFPPQTGPILDDVVRRIARSPLYDPARPEHVYLCDTRALFGLLTLR
                     YHSGGVTQMLFGRNAFIRPSSLERNVVFGPSGVPKEPERSLAYFIAHELTHAMTADRI
                     GGIRAHRLAPFQREGYADYVGFARAVDFQRGRDAILRDAPEMSVQRSGLYARYELLTA
                     YLLEQRGLSVDELLAHPRDAEAVQAELLRDPDL"
     gene            3669..5234
                     /gene="purH"
                     /locus_tag="VLJ38_09130"
     CDS             3669..5234
                     /gene="purH"
                     /locus_tag="VLJ38_09130"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HSU39720.1"
                     /translation="MPIRSAILSVSDKTGLMQFAKSLAERGIALISTGGTYSTLKAGG
                     VPVESVESYTGSPEVMSGRVKTLHPRVHGGILARATLDDNDLERLGGRFIDLVVVNLY
                     PFEQTLAKPGTSFETLIENIDIGGPSMLRSAAKNHERVTVVCDPSDYRLVLDELAREG
                     DVSRGTRERLAAKAFAHTAAYDAAISGWLSSRSETDGYPRYLTPVLEKAYSLRYGENP
                     HQSGAFYRDRSAVAGSLGTAESLGSGAKELSFNNLVDVDAALDAVREFENPAAVVVKH
                     TNPCGVATAPMLADAYRSAREADPMSAFGGIVALNREVDDITAEILAETFLECIIAPG
                     FSPGALDRLRSKAALRLIATGEWLGPTHPARQFKRVSGGFVIQDRDATGAGEVEAGRV
                     VTRRAPTQAELSSLSFAWCVCKHVKSNAIVLAAPGRSPGVYETIGIGGGQTARVTAVQ
                     TACEKAGDRAKGSVLASDAFFPFPDNIQVAARAGIAAIAQPGGSKKDEDSIKAADDAG
                     IAMIFTGVRHFRH"
     gene            5354..6562
                     /locus_tag="VLJ38_09135"
     CDS             5354..6562
                     /locus_tag="VLJ38_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSU39721.1"
                     /translation="MPGPERCSVCATEFELCFRYQVEERPPELGGKRYFCSQRCLEAS
                     HSEQADGKASCDACATSFKVEFAAQVVFTGGRRHYACKPECRARVLQGVRAVRLGQLL
                     DPRYLPEDAMLTPDPARASVTPTPPPISGIMEKPRGAEAGRRPPPRVIAVFNQKGGTA
                     KTTTSVHLAAGLARAGRRVLLVDTDGQGNAGACLGVTSERSLYHVLVMGLPYREAVVK
                     AREGLDLLPANETLAAAELYLSGQRQRDRVLEQRLAGMREAYDFVVLDCSPSLSLMNQ
                     NALVAADAVLCPVACDYLSLLGVRGVVRTIKQINRLLAHPLNLFGVLPTLYDARARLC
                     KESLDTLRETFREACLDPIHYAIKAKEAPAQGKTLFEYAPNSPTALDYGRLVERVLGH
                     ELPMAAGGTT"
     gene            6559..6864
                     /locus_tag="VLJ38_09140"
     CDS             6559..6864
                     /locus_tag="VLJ38_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39722.1"
                     /translation="MNRSDDLHEATARVLDRDDIEGVLGGSFYAPRPSGAAQSRTPGE
                     RPTHYKVICISMYTDDLERLDEMVQTLKTRGLTKANRSALIRYALGSVKLDDVPKGL"
     gene            6909..7982
                     /locus_tag="VLJ38_09145"
     CDS             6909..7982
                     /locus_tag="VLJ38_09145"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HSU39723.1"
                     /translation="MDFVDHRADPGAWAASLGVSREAIELYLSSDVIDLHVDSFIWHR
                     LLGRNPLVRQRSLPFLPGVALGHADLPRLREAQIAGATWVVTTNPLRDSADRVRVFVD
                     NVAELEGLFREAPDEVAIVTNAAEYRRARASGRHAAFVGVQGGNALDGDFSVLDRLRP
                     GILLRVTLMHLSRSELGAASAPLTSLGVDGLAARGAELVERLDEHRIFVDLAHASPRT
                     FWDALAVHDRSLPALVTHTGVSGVHRHWRNLDDRQVRAIAETGGVVGVIYHSAYLGDP
                     LFHGRAESIVRHLEHVRDTAGEDAPALGSDWDGFIVTPRDLPTCLELPRLVEHMLRRG
                     WRAEAIQKALGANFLRALTELRG"
BASE COUNT         1308 a         2819 c         2714 g         1343 t
ORIGIN      
        1 gcttgtgcgt gatgagacta tcgatgtcga tcttgccgtc catgtaccag tcgacgattt
       61 tcgggacgtc ggtgcggccg cgcgccccac cgaaggccgt ccccttccaa acgcgtccgg
      121 tcactaactg aaacgggcgc gtcgagatct cgcggccggc gcccgcgacg ccgatgatga
      181 cgctcacgcc ccaaccgcga tgacaacact cgagcgcttg gcgcatgagc tcgacattgc
      241 cgacgcactc gaagctgtag tcggcgccgc cgcccgtgag cgccacgagg tgcgcgacca
      301 gatccccctt gagttcgctc ggattcacga aatgggtcat gccgaactta cgcccgagct
      361 cggcgcgccg gtcgttgatg tcgacgccga tgatcagatc ggcaccggcg agccgcgccc
      421 cttgcacgac gttcaagccg atgccgccga ggccgaagac gacgacgttc gcgcccggct
      481 cgaccttggc cgtattgatg acggcgccga cgcccgtcgt gacgccgcaa cctatgtagc
      541 aaatcttgtc gaacggcgcg tccttgcgca ccttggcaac cgcgatctcg gggagcaccg
      601 tgaactccga gaaggtcgag cagcccatgt agtggtggac cttggttttg ccgatcgaga
      661 agcggctcgt gccgtcgggc atcacgcctt tgccctgagt cgcgcgaatc gccgtgcaga
      721 gattcgtctt acggctgagg cacgatttgc aggcgcggca ctcgggcgtg tagagcggga
      781 tcacgtgatc gcctcgctcg acgctcgtga cccccgcgcc gacgtcgacg acgacaccgg
      841 cgccttcgtg tccgaagata acggggaaaa gtccctcggg atcggcgccc gagcgggtga
      901 attcgtccgt gtgacagatg cccgtcgcct tgagttggac cagcacctcc cccgctttcg
      961 gcccctcgag ctccacctgc tcgatgacga gatccttacc ggcttcgaac gcgaccgcgg
     1021 ctcgtgtctt catgcggctc ctccgaggtc acgagcgtac acgatcgccg cgcgctcgcg
     1081 caccccgcgc ggcttcagcc ttccacgcgc ttggggacgt catcggcacg ctggctcgcg
     1141 cggaactcga tcacgcgaaa gtcagcgagc ccctgcgtgt aaaacgggtc ctccctcacg
     1201 atcgcctcga ctcgttcgcg ggtcggtccg accgccaaga tgatgccgcc gtcccgtggg
     1261 atcttgcgcc cggagatcaa gaacgtccca gcgtcgtagt atttcttcag aaaggccatg
     1321 tgagcgcgca tgtgcgcatc gatctcggag aggtcggcct tgtacgtgag ctcgatgacg
     1381 aacatcgaag gggtgaatgc agccgtcgcg ggaggcggtc aagcgcccgc tcgcgacaac
     1441 cagaccgagc ccgcccggct cctttgctga gccgtccacg tgtgctcgcg ggacgtggct
     1501 tacatgtggc gtgccacgcg gttcgcgttg atttccggcg ccgctctcgt cagcgtggcg
     1561 gcctgtgata gctccgttga cgcgccttcg ggcccggcgc ggtcgagcgg gcggggcggg
     1621 gccgcgccag cgagcgcggg ccgtacgaac gcggcgggcc acacgaatgc ggcggggcac
     1681 ggaaatagcg gtggcgccgt ggacacggca ggcaacaccg gcggtggacg tggaggtgcc
     1741 ggcagcgccg ggcaaccgcc cggcgggcgt gcgggcgcga acgtcggggg acgctcgtcc
     1801 ggcggcggct cggacagtgg gcgtaccggc acggccggga tccgcgacga gacggcgggc
     1861 gatagcggtg caggcggagc cggcggcgcg gaaacgaccg actacgacgc ggcagtgctc
     1921 gccgatggcc ccgtcatgta cctgacgatg agcggcgaaa cgaacgagcc tgatcgcagc
     1981 ggcaacggcc atgacggcag ttaccgcggg ggcgcaccgg cgcgtgcccc gctgccgaac
     2041 ggcgaccgag cggctggctt cgatggtgtg aagcaatacc tcacggtgcc ctccgccgcg
     2101 gcgctctcga tcccgacgac ccacgagctc acgtgggagg cgtggattcg ccctgacgtg
     2161 cttcagttcc cccacgcgac gaacggctac gtcgattgga tgggcaaatg cgaagagtac
     2221 gcgccgacct gcgagtggga ggcgcgtctg tacagcctga cgaactcgga agatcgctgt
     2281 aatcgcctct cggcgtacgc gttcaacccc gacggcgatc tcggctcggg cgcgttctgg
     2341 caacaagccg attgcggcgt gagcatcgtc gcgggcgact ggtaccaggt cgtcggtgag
     2401 tacacgacgc tcgcgcagcc cgcgagctgc tccgagactg gcagctatcc gggcgtcatc
     2461 gagatttggg tgaacggcgt ccgctggaac caagcaagtc acggtcagac cggttgcatg
     2521 agccagtatc aggtcgtgcc cgtcgcaaac gacagtcccc tcaacgtcgg gacgatggca
     2581 cacgacgcat ggttcgcagg cgcggtcggc aaactcgcga tttacgacaa gctgctcggt
     2641 gcagacgcga ttgcccggca ctaccaggtg atgaccggaa gacagccgac cggtagctgc
     2701 gcggacacct gttccttctg agatcggcga gcttcgggaa taccgcgcgt tccgcggcgt
     2761 tctttcgacg tggatccgcg cactcgtgcc ctcctccgcc gtctcgggcg cgtcgccggg
     2821 cgcgcgacgc tcggattttt caccgtcagc gtcgcgtgga tcgtgctggc actgcacccg
     2881 gagccgctct ttgcgtacac caccacgcgc gcgaacgtga cgctgcacgc tcgcgccccc
     2941 tttccgccac agacgggtcc cattctcgac gacgtcgttc ggcgtatcgc ccggtcgccg
     3001 ctgtacgacc ccgcgcgccc cgagcacgtc tatctgtgcg acacgcgagc gctgttcggt
     3061 ttgctcacgc tccgctatca ctcgggcggc gtgacgcaga tgctgttcgg gcggaacgcg
     3121 ttcattcggc cgtcgagtct cgaacggaac gtcgtgttcg ggccgtccgg cgtgccgaag
     3181 gagccggagc gctcgctcgc gtatttcatc gctcacgagc tgacgcacgc gatgacggcg
     3241 gatcgtatcg gcggcatccg tgcgcaccgg ctcgcgccgt ttcagcgcga gggctacgcc
     3301 gattacgtcg ggttcgcgcg ggccgtcgat tttcagcgcg gccgtgacgc catcctccgc
     3361 gacgctccgg aaatgagcgt gcagcgctcg ggactttacg ctcgctacga gctcctgacc
     3421 gcgtacctac tcgagcagcg cgggctcagc gtcgacgagc ttctcgctca tccgcgggac
     3481 gccgaagccg tacaagccga gcttttgcgc gatcccgacc tctgacggcc gggcgaccgc
     3541 caaaggtaac atcgcctgct cgcggatcgc cagccggagc gggttttcga gcctcaaaag
     3601 ccgcgccaag gcgtaggagc gtgccgtctg gcttgcctgc cactctccgg ggtaggctcc
     3661 ccgcccccat gccgattcgc tccgccattc tgtccgtttc cgacaagacc ggactgatgc
     3721 aatttgccaa gtcactcgcc gaacgcggga tcgcgctcat ctcgaccggt ggcacgtaca
     3781 gcacgctcaa ggccggcggc gtcccggtcg agagcgtcga gtcctacacg ggctcgcccg
     3841 aggtcatgag cggccgcgtc aagacgcttc acccccgcgt tcacggcgga atcctcgcgc
     3901 gcgcgacgct cgacgacaac gatctcgagc ggctcggcgg gcgcttcatc gacctcgtgg
     3961 tcgtcaattt gtaccccttc gagcaaaccc tcgcaaagcc gggcactagc ttcgagacgc
     4021 tgatcgagaa catcgacatc ggcgggccga gcatgctgcg ctcggcggcg aaaaatcacg
     4081 aacgcgtgac ggtcgtgtgc gacccgagcg actaccggct cgtgctcgac gagctggcgc
     4141 gggaaggcga tgtgtcgcgc ggcacgcggg agcggcttgc cgccaaggcg ttcgcgcaca
     4201 cggctgctta cgacgccgcc atcagcgggt ggctcagctc gcgcagcgaa accgacggct
     4261 acccgcgcta cctcacgccc gtactcgaga aagcgtactc gctgcgctac ggcgagaacc
     4321 cgcaccagag cggcgcgttc taccgggatc gaagcgccgt agcgggttca ctcggcaccg
     4381 cggagagtct cggcagcgga gccaaggagc tcagcttcaa taacttggtc gacgtcgacg
     4441 cggcgctcga cgccgtgcgc gagttcgaaa acccggcggc ggtcgtggtc aaacacacta
     4501 atccctgcgg tgtcgccaca gcgccgatgc tcgccgacgc ctaccgttcg gcgcgcgaag
     4561 cggacccgat gagcgcgttc ggtggcatcg tcgcgctcaa tcgcgaggtc gacgacatca
     4621 cggccgagat cctcgccgag acgttcctcg aatgcatcat cgcgcccggt ttttcccccg
     4681 gcgcgctcga tcgcctgcgc tccaaggccg ccctccggct catcgccacg ggggagtggc
     4741 tcggcccgac gcatcctgca cgccagttca agcgcgtgag cggcgggttc gtgattcagg
     4801 atcgcgacgc cacgggcgcc ggcgaagtgg aagccggacg cgtcgtcacg cgccgcgccc
     4861 cgacgcaggc ggaactctcg agcctctcct tcgcgtggtg cgtgtgcaaa cacgtgaaga
     4921 gcaacgctat cgtgctcgct gccccgggcc gtagtcccgg cgtctacgag accatcggca
     4981 tcggcggagg ccagacggcg cgcgtcacgg ccgtgcagac ggcctgcgaa aaagcgggcg
     5041 accgcgcgaa gggcagcgtg ctcgcgtcgg acgccttctt cccgttcccc gacaatattc
     5101 aggtcgccgc gcgcgccggt attgccgcga tcgcgcagcc cggtggcagc aagaaggacg
     5161 aggattccat caaggccgcc gacgacgcgg gcatcgcgat gatcttcacg ggcgtccgtc
     5221 actttcgtca ttgatctcag cgatctagca gcaagaccta aagctcgtcc gaggccacga
     5281 ccgccctcga gtgtgtcgtt cgggtcggcg agtttcttgg cccgcggcta actgcttcga
     5341 taactcacgg ggcatgcccg gccccgagcg ctgcagtgtg tgtgcgaccg agttcgagct
     5401 ctgctttcgg taccaggtcg aggagcgacc gccggagctg ggcggtaagc gttacttttg
     5461 ctcgcaacgt tgtctcgagg cgagccatag cgagcaagcg gacggcaaag cgtcgtgcga
     5521 cgcgtgcgcg acctcgttca aggtggagtt cgccgcgcaa gtcgtgttca cgggtggccg
     5581 gcgccattac gcttgcaagc ccgagtgccg ggcacgtgtg ctccaaggcg tgcgcgccgt
     5641 gcggctcggt cagctgctcg atccgcgcta cttgccggag gacgccatgc tcacgcccga
     5701 tccggcgcgc gcgagcgtga cgccgacgcc gccgcccatc agcggcatca tggaaaagcc
     5761 gcgcggcgcc gaagccgggc gccggccgcc gccgcgcgtg atcgccgtgt tcaatcagaa
     5821 gggcggcacc gctaaaacca cgacttccgt gcacctcgcc gcgggcctgg cccgggcggg
     5881 gcggcgcgtg ctcttggtgg atacggacgg ccagggcaat gcgggcgcgt gcctcggcgt
     5941 gacgagcgag cgctcgctct accacgtgct cgtgatgggc ctgccctacc gcgaagcggt
     6001 cgtgaaggcg cgtgagggac tcgacctctt gccggcgaac gagacgctcg ccgccgccga
     6061 gctctacctg tcgggacaac ggcagcgcga ccgcgtgctc gagcagcggc tcgcgggcat
     6121 gcgcgaggcc tatgacttcg tggtgctcga ttgctccccg agcctgtcgc tcatgaacca
     6181 gaacgcgctc gtcgctgcag acgccgtgct ttgccccgtc gcgtgcgatt acctctcgct
     6241 gctcggcgtg cgcggcgtgg tgcgcacgat caagcaaatc aatcgactgc tcgcgcaccc
     6301 cctgaatctc ttcggcgtgt tgccgacgct ctacgacgcg cgcgcccgcc tctgcaagga
     6361 gtccctcgac accttgcgcg agaccttccg cgaagcctgc ctcgacccga tccactacgc
     6421 gatcaaggcg aaagaggcgc ccgcgcaagg caagaccctg ttcgagtacg cgcccaattc
     6481 gccgacggcc ctcgactacg gccggctcgt cgaacgcgtg ctcgggcacg aacttcccat
     6541 ggcagccgga ggaaccacat gaacagaagc gacgatctgc acgaagcgac cgcccgggta
     6601 ctcgaccggg acgacatcga aggcgtgctc ggcgggagct tttatgctcc gcgcccgagc
     6661 ggcgccgcgc aaagccggac gccgggcgag cgcccgacgc actacaaggt gatctgcatc
     6721 tcgatgtaca cggacgacct cgaacgtctc gacgaaatgg tgcaaacctt gaagacgcgg
     6781 ggcctcacca aggcgaaccg cagcgcgctc atccgttacg cgctcggctc cgtcaaactc
     6841 gacgacgtgc ccaaggggct ctgaccctcg atcgacggcc acgggctcga ggggtagcgt
     6901 tgggggccat ggatttcgtc gatcatcgcg ccgatccggg cgcctgggcg gcaagcctcg
     6961 gcgtctcgcg cgaagcgatc gagctttatc tgtcgagcga cgtgatcgat ctgcacgtag
     7021 actcgttcat ttggcaccgg ctgctcggga gaaacccgct cgtgcggcag cgctcgctgc
     7081 cgtttttgcc cggcgtcgcg ctcggccacg ctgacttgcc gcggctgcgt gaagcacaaa
     7141 tcgcaggggc gacctgggtc gtcacgacga atccgctgcg cgactccgcc gatcgcgtgc
     7201 gcgtgttcgt cgacaacgta gccgagctcg aggggctctt ccgagaggcc ccggacgagg
     7261 tcgcgatcgt caccaacgcc gccgaatatc gccgagctcg cgcgagcggg cgccacgcgg
     7321 cgttcgtcgg cgtgcagggc ggcaacgcgc tcgacggcga cttttcggtg ctggatcgcc
     7381 tgcgtcccgg cattctcctg cgggtcacgc tgatgcactt gagccgctcc gagctcggcg
     7441 cggccagcgc gcccctcacc tcgctgggtg tcgacggcct cgcggcgcgc ggcgccgagc
     7501 tcgtcgagcg cctcgacgag caccgcattt tcgtcgatct tgcgcatgcg agcccgcgca
     7561 cgttctggga cgcgctcgcc gtccacgatc gttcgctgcc cgcgctcgtg acgcacacgg
     7621 gcgtctcggg cgtgcatcgc cactggcgta acctcgacga tcgccaggtc cgcgccatcg
     7681 cggagacggg cggcgtggtc ggtgtcatct accactccgc ctacctcggc gatccgctgt
     7741 ttcacgggcg tgccgagagc atcgtgcgcc acctcgagca cgtgcgcgac acggcgggtg
     7801 aagacgcgcc cgcgctcggc agcgactggg acggcttcat cgtgacgccg cgcgatctgc
     7861 cgacgtgcct cgaattgccg cgtttggtcg agcacatgct ccggcgcggc tggcgcgccg
     7921 aggccatcca aaaagcgctc ggcgcgaatt tcttgcgggc cctcacggag ctccgcggct
     7981 agcgcgccaa gcgggttcgg accgctggct ctccgacttc acgcgtcgag taggacgacg
     8041 ctgagctttg cgaggcgcgc ggcctcgagc gcgtcggcgc gatcgagcgc gtcttcgctc
     8101 tcgtcagtca cgctcttgtc ctcgtcctcg tcctcgtcgg cttcgcgata cgccgggccc
     8161 ttcagatcct gcttcgagag gcgc
//
LOCUS       DATIML010000527         1842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2703028, whole genome shotgun sequence.
ACCESSION   DATIML010000527 DATIML010000000
VERSION     DATIML010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2703028"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..910
                     /locus_tag="VLJ38_09150"
     CDS             59..910
                     /locus_tag="VLJ38_09150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39724.1"
                     /translation="MTLESRWIDELPLESAERELLVAGKAARPSRDDVDANWRAFSIA
                     LSGPTSAAASAGASHAMSAKAASGLATKASAAGLLSAATVKSFAVGIALGVGVSAASA
                     VVERVRPPQVRPASAASRPLAPGADPTPRVPKPVPRTGALPISPPLASAFEQGGRAEP
                     ALRAAPHTTTAAAAIPAPTSALPLAGAPSATLLSGPSLSAQAHELAQVKRLLDAGATA
                     EALRHLTATFSAGEPSALSEERDALFVQALTRAGRGAEARARAREFLGRYSRSPYLES
                     IRRVAEE"
BASE COUNT          300 a          598 c          659 g          285 t
ORIGIN      
        1 cgcgcatcct cgccgaacgc caaggccgaa gcgtgcgctt cgccgctgga gctcggccat
       61 gacgctggag agccgttgga tcgacgagct gccgctcgag tccgccgaac gcgagctgct
      121 cgttgccggc aaagccgccc ggccgagccg cgacgacgtc gacgcgaatt ggcgagcgtt
      181 ctccatcgcg ctgagcggac ccacgtcagc tgcggcgagc gcaggcgcaa gtcacgcgat
      241 gtcggccaaa gccgcctcgg ggcttgcgac gaaggcttca gccgcgggcc tgctgagcgc
      301 tgcgaccgtg aaatcgttcg ccgtcggcat cgcgctcggc gtcggtgtca gcgccgccag
      361 tgccgtcgtc gaacgggtgc gtccgccgca ggtgcgcccc gcgagcgccg cgagccgccc
      421 gcttgcgcca ggagcggacc cgacgccgcg tgtgccgaaa ccggtgcctc gtacgggcgc
      481 tctccctatt tcaccgccgc ttgcctcggc cttcgagcag ggcggcagag cggagcctgc
      541 cctgcgcgcc gcgccgcaca cgacgactgc tgcggcggcg atcccggccc cgacctcggc
      601 gctcccactc gctggggcgc cgtcggcgac cctgctttcc ggaccatcgc tctccgcgca
      661 ggcgcacgag ctcgctcaag tcaagcgctt gctcgacgcg ggggcgacgg cggaagctct
      721 gcgccatctc actgcgactt tcagcgcggg tgagccttcc gcgctctccg aagagcgcga
      781 cgctctgttc gtgcaagcgc tcactcgcgc agggcgcggc gccgaagctc gcgcccgcgc
      841 gcgcgagttc ctgggccgtt attcccgcag cccctacctt gaaagcatac gacgcgtcgc
      901 cgaagagtga tcgcgcgagc gaggcgccgc cactcagggg cgagttgacc acgcctcgac
      961 catttccgac gagaaggctg agaagcgcgt caatcttccg ctactccgtc attgttcgtg
     1021 ccgtgagcgg agtcggtggt gggccgacga ataaggtgat cggcacgaaa gtggggagcg
     1081 ccggcggggg cgctggtttt cagaacgagg cggtcgccgg caaggagggc ggaagtcaga
     1141 gccccaccgg tggtgcggcg ataggtggag gcgcgagcac cgcgggtgtc gcgagcgggg
     1201 gtgtcgcggg caccaccggt ggtgcggtag gcgagaaagg cgcccatcac cttcgagcat
     1261 cgcgtcgact acgcgagcgg aggcagtcca cgttcgatcg aattcggcga tctgaacggc
     1321 gacatcagag tgttggccat gcatcggcaa ccgctcgcgg cgctcggact cctgctcgtg
     1381 ctcgagcccc ctagtccgaa gcagctgcga attcgcaacg cagacaaggg gacgcgatca
     1441 gttccagtag tcgaggggat atcgagaagg cgactgcgcg aggtgtgaag agcttgattg
     1501 tgttcgtcgg accgcgtccg ccaactcgag ggaacgagga cgtgaacgac ggcgggtacc
     1561 tgaacaggac ttgttacgac tcgtggctca cggcgtacgt gacgtcggct ggcgacagag
     1621 tcgtcgacga gcgccgattg cggtcaagcg tgggtgtttc gcggcgacgc tcgcgggcaa
     1681 gacggtcacg acattcgtcg gcaactagat gagggtttac caatgaacag agcgcgaact
     1741 atcggtggaa ttggcttggc ggttctcgtt gcggcttgct cgaactcggg cgcgtccgac
     1801 agcaagggcg gtggtggcgg gagcggcacg tccgcgagcg gc
//
LOCUS       DATIML010000528         3258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5592651, whole genome shotgun sequence.
ACCESSION   DATIML010000528 DATIML010000000
VERSION     DATIML010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3258
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5592651"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VLJ38_09155"
     CDS             <1..246
                     /locus_tag="VLJ38_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39725.1"
                     /translation="KRTVLVEGERAGRLFLAPELPAGTKVVTQGRALLEDNDRVTALL
                     EAEPTVAPANLASAASAEPKKAANEPAHRSGAPDHGR"
     gene            282..>3258
                     /locus_tag="VLJ38_09160"
     CDS             282..>3258
                     /locus_tag="VLJ38_09160"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU39726.1"
                     /translation="MIAIALVVFSAVVAPRMAVDTFPELTPPVLVVGTLAPGLGPKDV
                     EKTLTWRIEKYVSATPGVDHVESVSRNNLSIVWVWLKWGTDLNASQTLVQQQTAFAMS
                     AVPKSLGVLPPFVLQFDPSNAPVVQVAVYGGGLNGPQLYDYAQNNLEPLLEGIPGVAS
                     ASLNGGRQRQINVVVDPVAATARGVTSSDIAAAVSQSNALLPSGVFISPQFHANVYTN
                     AVPERVLTIGSALVKMVGGKPVRISDVARVEDGGSPESQAVSINGQQGVYLNVLRVPG
                     GNTLEIVDAVKRTVASLKNLPAGMHVEPIFDQSTFVRTTYHGLKQEVIQALVLIALVI
                     LLFLQSVRGTLIVSVAIPLSFAITIIVLYAAGQTLNAFTLGGLTLAMGRLVDDAVVVL
                     ESIHRHQRLGKSAARAALEGTNAVALPVLASTLTTMAVLLPVLLLAGLAKKLFVPLAL
                     TVAVAMTASYFVSVCVTPVACRFLLGRAEHGRFGQWLEARIDAVAEGYSRALRRALPY
                     RLTVLLGCGLVTAGAVWASTRLPSTFFPEIDESMERIYVRLAPGMSLRESAELMKQMG
                     DTLVRELPKGVVKLVLTNTGSPNNARSAMTSPNSGPHMGFIRLELVGEEGRTLSQREL
                     ADRTREILNRRYPGVEFLQWPGGLVASVFSNGYIAPLVVELRNDSLAELSQQAKAVAA
                     VASGVPGVRDVRVSLETDYPEVRVETDRAEAGLVGLTARTAAQTTLEATLGNINTPSV
                     WIDPNNGQSYYVVTYYDGRAVADPSALAAIPARLSDGKAVPLGAYGHVRRSTGPIAIE
                     RNQLQRAAHVLMQMEGRDIGSAAAEIERRLERDPRTRGIEFSYVGQVELMRNTFGGLG
                     LAIGLAVMVVFMIMASQFKSLRLPFVMLFTIPVSLVGIVLALLAAGQGFSITALMGVL
                     MVVGIAVSNGILLIHEANRRYTGARALGHRADPFESVVAAARVRFVPIAMTSLATILG
                     LLPTALGLEAGTESNRPLAL"
BASE COUNT          508 a         1103 c         1077 g          570 t
ORIGIN      
        1 aaaaggacgg tcttggtcga aggcgagcgt gcgggtcggc tcttcctcgc gcccgagctg
       61 cccgccggga cgaaggtcgt cacgcagggc cgcgcgctgc tcgaggacaa cgaccgcgtc
      121 acggcgctgc tcgaagccga gcccaccgtc gcgccggcga acctcgcgag cgccgcgagc
      181 gcggagccga aaaaggccgc caacgaaccc gctcatcggt cgggcgcacc ggatcacggg
      241 cgatgacacg tctcgcgctg aaaaacccga ttgcaatctg catgatcgcg attgcgctcg
      301 tggtcttctc ggccgtcgtc gcgccgcgca tggcggtcga tacgttcccc gagctgacgc
      361 cgccggtgct cgtcgtcggt acgctcgcgc ccgggctcgg gccgaaagac gtcgagaaga
      421 cgctcacgtg gcgcatcgaa aagtacgtga gcgcgacgcc cggcgtcgac cacgtcgaga
      481 gcgtttcacg taacaacctt tcgatcgtgt gggtctggtt gaagtggggc acggacctga
      541 acgcttcgca gacgctcgtg cagcagcaga cggcgttcgc catgtctgcc gtgccgaagt
      601 cgctcggcgt gttgccgccg ttcgtgctgc agttcgaccc ttcgaacgcc cccgtcgtgc
      661 aagtcgcggt ctacggcggt ggcttgaacg gcccacagct ctacgactac gcacaaaata
      721 acctcgaacc gctgctcgag ggcattcccg gcgttgcgag cgcttcgctc aacggcgggc
      781 gccagcgcca gatcaacgtg gtcgtggacc ccgtggcggc cacggcgcgc ggtgtcacct
      841 cgagcgacat cgccgccgcc gtttcgcagt cgaacgcgct cttaccgtcc ggcgtcttca
      901 tctcgcccca attccacgcg aacgtctaca cgaacgccgt gcccgagcgc gtgctcacca
      961 tcggctcggc tctggtcaaa atggtgggcg gaaagcccgt tcgcatcagc gacgtggcac
     1021 gcgtcgagga cgggggcagt ccggagagcc aagccgtctc gatcaacgga cagcagggcg
     1081 tctacctgaa cgtcttgcgc gtcccgggcg gcaacacgct cgagatcgtc gacgccgtca
     1141 agaggacggt ggcgtcgctc aagaatctgc cggcgggcat gcacgtcgag cccatcttcg
     1201 accagtcgac gttcgtgcgc acgacgtacc acggcctcaa acaagaggtg attcaggcgc
     1261 tggtcctgat cgcgctcgtg atcctgctgt ttctccagag cgttcgcggg acgctgatcg
     1321 tgtcggtggc gattccgctt tcgttcgcga tcaccatcat cgtcctctac gccgcgggcc
     1381 agacgctgaa tgcgttcacg ctcgggggcc tgacgctcgc catgggacgg ctcgtggacg
     1441 acgcagtcgt cgtgctcgaa tcgatccacc gccaccaacg gctcggcaag agcgctgcgc
     1501 gcgccgcgct cgaaggcacc aacgccgtcg cgctgcccgt cctcgcctcc accctcacga
     1561 ccatggccgt gctcttgccg gtgctcttgc tcgcgggtct ggcgaagaag ctgttcgtgc
     1621 cgctcgcgct cacggtcgcc gtggcgatga cggcttcgta cttcgtgagc gtgtgcgtga
     1681 cgccggtcgc ttgccgcttc ctgctcggcc gcgccgaaca cggtcgtttc ggccagtggc
     1741 tcgaggcgcg catcgacgcc gtcgccgagg gttactcacg ggcgctcagg cgcgccttgc
     1801 cgtaccgcct cacggtgctc ctcggctgtg gtctggtgac ggcgggtgcc gtctgggcct
     1861 ccacgcgtct gccgagcacg ttttttccgg aaatcgatga gtccatggag cgcatttacg
     1921 tgcgcctcgc accggggatg tcgctccgcg aatccgccga gctcatgaaa cagatgggcg
     1981 acacgctcgt ccgggagctg ccgaaaggcg tcgtgaagct cgtgctcacc aacacgggct
     2041 cgccgaacaa cgctcgcagc gcgatgacga gccccaacag cgggccgcac atgggcttca
     2101 tccggctaga gctcgtgggc gaggagggac gcacgctttc acagcgcgag ctcgcagaca
     2161 ggacgcggga aatcctgaat cgccggtatc caggcgtcga gttcttgcag tggcccggcg
     2221 gcctcgtcgc gagcgttttc tcgaacggct atatcgcgcc gctcgtcgtc gagctgcgta
     2281 acgacagcct cgcggagctc tcccagcagg cgaaagcggt tgctgccgtc gcgtctggcg
     2341 tgccgggcgt gcgcgacgta cgcgtctcgc tcgagaccga ttaccccgag gtgcgcgtcg
     2401 aaacggaccg cgcagaggcc ggtctcgtgg ggctcacggc acgcacggcc gcgcagacga
     2461 cgctcgaggc cacgctcggc aacatcaaca cgccgagcgt ctggatcgat ccgaacaacg
     2521 ggcagtccta ttacgtcgtg acctattacg acggtcgcgc ggtggctgac ccgagcgccc
     2581 tcgccgcgat tccggcgcgc ctgagcgacg gcaaggccgt gccgctcggc gcgtacggcc
     2641 acgtgcggcg ttcgacgggg cccatcgcga tcgagcgcaa ccagctgcag cgcgcggcgc
     2701 acgtgctgat gcagatggag ggtcgcgaca tcggctccgc ggcggccgag atcgagcgcc
     2761 ggctcgagcg cgacccgagg acgcgaggca tcgagttttc ctatgttggg caggtcgagc
     2821 tgatgcgaaa taccttcggt ggactcggcc tcgcgatagg tctggccgtg atggtcgtgt
     2881 tcatgatcat ggcgtcgcag ttcaaatcgt tgcgcttgcc gttcgtgatg ctcttcacga
     2941 tccccgtgtc gctcgtcggc atcgtgttgg cgctcctggc cgcgggtcag ggtttctcga
     3001 tcacggcgct catgggcgtc ttgatggtgg tgggcatcgc cgtctcgaac ggcatcctgc
     3061 tgatccacga ggccaaccgt cgctacacgg gggcgcgtgc tctcggccac cgggccgatc
     3121 cattcgagag tgtcgtcgcc gccgcccgtg ttcgcttcgt gccgatcgcg atgaccagcc
     3181 tggcgacgat tctcggcctc cttcccaccg ccctcggcct ggaggctgga acggaatcaa
     3241 atcgaccgct ggcgctgg
//
LOCUS       DATIML010000529         1563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5016345, whole genome shotgun sequence.
ACCESSION   DATIML010000529 DATIML010000000
VERSION     DATIML010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5016345"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1548)
                     /locus_tag="VLJ38_09165"
     CDS             complement(<1..1548)
                     /locus_tag="VLJ38_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39727.1"
                     /translation="MRFRPLYVEFFDVEAQKGKSAFSVPNGKIDFDAGASLVLDARMK
                     SPGFDLRDFLAIWRLDEDPRWADLEGETVADASVHYVLGGKQDPCDSGVLVTNGALAF
                     KRLALFGERYDGGHADYRLRWYDRDAGYRAMELGIPSVVLTKGSGSIVGSVDVRPGGK
                     IEGHLVASAVPIGKIDSLPSLLRVVDGQASAVAELSGSLDELEATATARVSPLHLGRA
                     TLPASNLAIVLTPQRIERPVVGKTHCGAAVEAPFDRAEYDADRSAGVFAVRGSLFGGE
                     LQVSDLTITRQSNKLVRGKVELRDLDLGAAAELVPALALSEARPAGRVSGALEVAELH
                     TADPLGSRVRLTLDELALSHNGYSVRLVPGAEPISLEAGTVKLPALAFTTTTPRGYQA
                     TFDMSGDIADVRESARIDATVALRPVDLGAVTQAFSRVERAKGSLTGKIGITGLLRSP
                     DYSGGFELTGGEMVVRGLAVPISDIELGLKLEAGELEVSRGSARMGNGKLTLSGGAPL
                     RGLELGAV"
BASE COUNT          246 a          561 c          530 g          226 t
ORIGIN      
        1 cacggcgccg agctcgagcc ccctgagcgg cgcgccgccg ctcagcgtga gcttgccgtt
       61 gcccatgcgc gcgctgccgc gcgacacctc gagctcgccc gcttcgagct tgagcccgag
      121 ctcgatgtca ctgatcggca cggcgaggcc gcgcaccacc atttcgccgc ccgtgagctc
      181 gaaaccgccc gaatagtcgg gcgaacgcaa gagccccgtg atgccgatct tgcccgtgag
      241 gctgcccttg gcgcgctcga cgcgcgagaa cgcctgcgtc acggcgccga ggtcgaccgg
      301 gcggagcgcg accgtcgcgt cgatgcgggc cgactcgcgc acgtcggcga tgtcgccgct
      361 catgtcgaag gtcgcttggt agccgcgcgg ggtcgtggtc gtgaacgcga gagcgggcag
      421 cttcaccgtg ccggcttcga gcgaaatggg ttctgcgccg gggacgagac gcacgctgta
      481 gccattgtgg gagagcgcaa gctcgtcgag cgtcaggcgc acgcgcgaac cgagtggatc
      541 ggccgtgtgt agctcggcca cctcgagcgc gccgctcacg cgtccggccg ggcgcgcttc
      601 ggagagcgcg agcgcgggca cgagctccgc cgcggcgccg agatcgaggt cacgcagctc
      661 gaccttgcca cgcacgagct tgttgctttg acgcgtgatc gtcagatcgg agacctgtag
      721 ctcgccgccg aacagtgagc cgcgcaccgc gaacacgccc gccgagcgat ccgcgtcgta
      781 ttcggcgcgg tcgaagggcg cctccacggc cgcgccgcaa tgcgtcttgc ccacgacggg
      841 ccgctcgatg cgctggggcg tgagcacgat cgccaggttc gacgccggca gcgtcgcccg
      901 gccgaggtgc agcggcgaga cgcgcgccgt cgccgtggcc tcgagctcgt cgagcgaacc
      961 gctgagctcg gcgacggcag acgcctgacc gtcgacgacg cgcaagagcg acggcagcga
     1021 atcgatcttg ccgatcggca ccgcgctcgc cacgaggtgt ccctcgattt tgccgccggg
     1081 tcgcacgtcc accgaaccca cgatcgagcc cgagcccttc gtgagcacca cgctcgggat
     1141 cccgagctcc atggcgcggt aacccgcgtc gcggtcgtac caacgcagcc ggtagtcggc
     1201 gtgcccgccg tcgtagcgtt caccgaacag cgcgaggcgc ttgaacgcga gcgcgccgtt
     1261 cgtcacgagc acgccggagt cgcagggatc ctgcttgccc ccgagcacgt agtgcacgct
     1321 cgcgtcggct acggtctcgc cttcgaggtc ggcccagcgc gggtcctcgt ccaagcgcca
     1381 aatcgcgaga aaatcccgca aatcgaagcc tgggctcttc atcctcgcat cgagcacgag
     1441 cgaggcgccc gcgtcgaaat cgatcttacc gttcggcacc gagaacgcgc tcttgccctt
     1501 ctgcgcctcg acgtcgaaga actcgacgta gagcggacga aagcgcacct tggcgctctt
     1561 caa
//
LOCUS       DATIML010000530         4221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4435927, whole genome shotgun sequence.
ACCESSION   DATIML010000530 DATIML010000000
VERSION     DATIML010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4221
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4435927"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1743)
                     /locus_tag="VLJ38_09170"
     CDS             complement(<1..1743)
                     /locus_tag="VLJ38_09170"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HSU39728.1"
                     /translation="MSRVSRAQEFDVPAEYTLPAQGLASVTADFDGDGDSDIATLTSD
                     GSVATSLNDGHGAFTTTPSAAAVPVGSTQIRNGTRAVAGDFNNDGAVDLLFASSRAGG
                     VYSGTGSCLLTLSLNRGDGSFEPGRSWSAVPGTPATPSTSPYVTYTCGTLDVGDFDRN
                     GSLDFALPVTTGPESAPYYHTGVVNVFLGAADGTFTASTTPLLDGTSEALKSGDFDGD
                     GALDLAVGVDLISTSGPYSHELEILSGDGSGQFAPTFIDTQSYAYLGATYFTAARATD
                     SNGDGRLDLLLLASAYSHLFDPAYIHEFVATNAGDGTFLPPVRVVPESGVVGLESADV
                     DADGKQDMALASSDDRITLALGDGHGGYTTSGVFAAGGGALASFSADFDGDGRADLGV
                     LDPSRPVFRIALAEATEPGFRLPPVTDLGTAAGSAFTFTPGDVNGDGKPDLVTAADGK
                     FSVLLGSGDGRLTTLTPSPLYTANAYLGAPLLADFNQDGRSDLAVPTRDGSIITLYGN
                     ADGSLSGPAAGTVGNASFYQGALGDFDEDGDLDLAVFGTLAAGSPPVVSASVRLYTND
                     GAGNFAFDQEFPVTI"
     gene            2033..3070
                     /locus_tag="VLJ38_09175"
     CDS             2033..3070
                     /locus_tag="VLJ38_09175"
                     /inference="COORDINATES: protein motif:HMM:NF016103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HSU39729.1"
                     /translation="MTRTHGWAWLARWLPIALVACAGRAPPAAQTVAAVTPRQDEANA
                     SATQRAETPRLVGRIWDTRARTFVAEESVISRAALARFVLLGEMHDNPDHHRLQALVL
                     ERLVEARRRPRVALEMLDVDAQPTVDAYVANPAATASGFGAAVGWDKSGWPSFADYAP
                     IFEVAFAARLPIVAANLEHDRARALVHDGLSALSPERAAALELARPFPPALERALEEE
                     LGADHCGMLPSSLLAPMALAQHGRDAQMARVLLEGGRDVPAVLIAGGGHVRRDRGVPY
                     YLALNGETSVLALDFVEVQADETEPSRYAPAAPDGAPAVDFVWFTPRANDDDPCKAFT
                     HAPGSTARAFP"
     gene            complement(3103..3606)
                     /locus_tag="VLJ38_09180"
     CDS             complement(3103..3606)
                     /locus_tag="VLJ38_09180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39730.1"
                     /translation="MADALIVETAIGCLEREFPPGLTSLVALDDRVNAELRARDTSVA
                     PERLVELLAADPRVLVEYRDGDATPWVRLRSAVTDDDARARLVEILLEARTFDEIWGR
                     ITAESAAESHPLFRDALRLLAEGKPNSLDDPLKESFAQALTRFPDNPRAVELAGILHA
                     HAEDLRR"
BASE COUNT          696 a         1408 c         1434 g          683 t
ORIGIN      
        1 tatggtgacg ggaaactctt ggtcgaaggc gaagttgccc gcgccgtcgt tcgtgtagag
       61 ccggacgctc gcggagacca cgggcggaga gccggctgcc agcgtaccga acactgccag
      121 atcgagatcg ccgtcctcgt cgaaatctcc gagcgcgccc tgatagaagg atgcatttcc
      181 gaccgtgccc gcggccggcc ccgagagcga gccgtcggca ttgccgtaaa gcgtgatgat
      241 gctgccgtcg cgcgtcggaa ccgcaagatc gctgcgcccg tcctgattga aatcggcgag
      301 gagcggcgcg ccgaggtacg cgttggccgt ataaagcggg ctaggggtca gcgtggtcaa
      361 tcggccgtcg ccgctgccga ggaggacgct gaactttccg tctgccgccg tgacgaggtc
      421 gggcttgccg tcaccgttga cgtcgccggg cgtgaacgtg aacgcggaac ccgcggccgt
      481 gccgaggtcg gtcacgggcg gcagccgaaa gccaggctcc gtggcctccg cgagtgcgat
      541 gcgaaacacg ggacgggacg gatcgagcac gccgaggtct gcgcgaccgt cgccgtcgaa
      601 atcggccgag aacgaggcga gcgctccgcc gcccgcggcg aacacgccgc tcgtggtgta
      661 cccgccgtga ccgtcgccga gcgcgagcgt gattcgatcg tcgctgctgg cgagcgccat
      721 gtcctgcttc ccgtcggcgt cgacgtccgc gctttcgagt ccgacgaccc cgctttcggg
      781 caccacgcgc acgggcggta aaaatgtgcc gtcacctgcg ttagtcgcaa cgaactcgtg
      841 aatgtacgcc ggatcgaaga gatgggagta cgcactcgcg agcagcaaga gatcgagccg
      901 tccgtccccg ttgctgtcgg tggcacgcgc agccgtgaaa tacgtcgccc cgaggtatgc
      961 ataggattgg gtgtcgatga aggtcggcgc gaactgcccg ctaccgtctc ccgacaagat
     1021 ctcgagttca tgtgaatacg gtcccgaggt cgagatcaag tccacgccga ctgcgagatc
     1081 gagcgccccg tccccgtcga agtcgcccga cttcagtgcc tcactcgtac cgtcgagcag
     1141 aggcgtagtc gatgccgtga aggttccgtc tgcggcgccc aggaagacgt tgacgacgcc
     1201 ggtgtgataa tatggggcac tctcggggcc agtcgtcacc gggagcgcga agtccaagct
     1261 cccgttgcgg tcgaaatcgc ccacgtcgag cgtgccgcaa gtatacgtca cgtacggtga
     1321 ggtggacgga gtggccggtg tgcccggcac ggcggaccaa ctccggcccg gctcgaaact
     1381 accgtcgccc cgattgagcg agagcgtcaa caggcacgag ccagtacccg agtagacgcc
     1441 tcctgcgcgc gagcttgcga agagcaagtc gacggctccg tcgttgttga agtctccggc
     1501 gacggcgcgc gttccgttgc ggatctgggt gctgccgacg gggacggccg cggccgacgg
     1561 cgtggtcgtg aacgcgccgt ggccgtcgtt caatgacgtg gcgaccgaac cgtcggaggt
     1621 gagggtcgcg atgtcgctgt caccgtcgcc gtcgaagtcg gcggtgacgg atgcgagacc
     1681 ttgtgccgga agcgtgtatt cggcgggaac gtcgaactct tgggctcgcg agacccggct
     1741 cacggcagcg actcccagca tcattgctaa tgacgaacga atgcgcaggc tcatgtgctt
     1801 tctccgtggc tatttcgcgg ccatgggcgg cactcgccaa ttccgacgcg attccgaggg
     1861 ccgcactccc gccgtgaaac gcacgcgaac atcggtctgg ctccagcgcg cgtcaacgcc
     1921 gcaaatcgac gcacccgcgc gcacgtgccg caccaccgtg gctgcgccgc cagcaaatat
     1981 gacacagccg caccgcccgt ctcggagtcg tgttacccac tctctccacg gcatgacgcg
     2041 aacgcacggt tgggcttggc tcgcgcggtg gttacccatc gcgctcgtgg cgtgcgcggg
     2101 ccgtgcgccg cccgccgcgc aaaccgtcgc ggccgtgacg ccgcgacagg acgaagcgaa
     2161 cgcgtcggcg acgcagcgag ccgaaacgcc acggctcgtc ggacgaattt gggacacgcg
     2221 agctcgaacg ttcgtcgccg aggagagcgt gatcagtcgc gcggcgctgg cgcgcttcgt
     2281 gctgctcggc gaaatgcacg acaaccccga tcatcatcgg ctgcaggcgc tcgtgctcga
     2341 gcggctcgtc gaggcccgcc gccgcccgcg ggtcgcgctc gagatgctcg acgtcgacgc
     2401 gcagccgacc gttgacgcat acgtggcgaa ccccgccgcg accgcgagcg gcttcggcgc
     2461 ggcggtcggt tgggacaaga gcggctggcc gtcgtttgcc gactacgcgc cgatcttcga
     2521 ggtggctttc gcagcccgac taccgatcgt cgccgccaac ctcgagcacg atcgagctcg
     2581 cgcactcgtg catgacggac tctccgcgtt gagcccggaa cgcgcggcag cgctcgagct
     2641 cgctcggccc tttccgccgg cgctcgagcg cgcgctcgag gaggagctcg gcgccgacca
     2701 ttgcggcatg ttgccgtcct cgctgctcgc ccccatggcg ctcgcccagc atggtcgcga
     2761 cgcccaaatg gcccgcgtgc tgctcgaggg cggcagagac gtccctgccg tgctcattgc
     2821 gggcggcggc cacgtccggc gcgatcgcgg cgttccctac tatctcgctc tgaacggcga
     2881 aacctcggtc ctggcgctcg acttcgtcga agtccaagcg gacgagacgg agccgagccg
     2941 ctacgcgccg gcggcgcccg acggagcgcc cgccgttgac ttcgtctggt tcacgccccg
     3001 cgcgaacgac gacgacccct gcaaggcgtt cacgcacgct ccgggcagca cggcccgtgc
     3061 atttccttga ccccggaggc gagcggcgtc gcgggcccgc ggctagcggc gcaggtcctc
     3121 ggcatgagcg tgcaggatcc cggcgagctc gaccgcccgt ggattatcgg ggaagcgggt
     3181 gagcgcttgc gcgaagctct ccttcagggg gtcgtcgagt gagttcggct tgccttccgc
     3241 gagcaaacgc aacgcgtcgc ggaagagcgg gtgcgattcg gccgcggact cggcggtgat
     3301 tctcccccag atttcgtcga acgtgcgcgc ttccagcaaa atctcgacga gccgagcgcg
     3361 cgcgtcgtcg tccgtgacgg cgctccgcag ccgaacccag ggggtcgcgt caccgtcgcg
     3421 atactccact agcacgcgcg gatcggcggc caagagctcg acgagtcgct ctggcgcgac
     3481 gctcgtgtcg cgcgcgcgga gctccgcgtt cactcggtcg tcgagagcca cgagcgaggt
     3541 caagcccggt ggaaattctc gctcgaggca accgatcgcg gtttcgacga ttaatgcgtc
     3601 agccatggcc tgagcctagc agccggggaa tcgacggcgc ggcccgcgct cacccgtctc
     3661 agtagatctc gtcgaccgga agctcgactc cgattgcgct gagcgccaag gactgcccgg
     3721 ggcctgcact acgcgcggtc cagccctcat ttcgcaaaaa gacttcgatc tttctgtacg
     3781 caggctgtcc gacggccgca tccaaacatc ccgtgtatgg acgcgagctc tccgagcgtt
     3841 cccgtccaac caggtcatgc gccgggcacg cgtctggcca gcgcatgacg ctgtggccat
     3901 tcgctcaatg agcgcagaac agaacaaggt agccaggtga gctcgctcac ctcggcgtcc
     3961 tgctgcggat caagtgtggt ggttaggcgg tgcgcggcta agccgggtca atttgccgcg
     4021 ttgacgagcg gggaacggca ggtgagtgtc gcgtcgagag gcgcgcggct gtcggatagc
     4081 cgagcgctgt tccaccactg tgcgcgggag gactccgatg ggccgtagca ttcgttcgaa
     4141 gctcgcaggc ttggcggcaa ttacggcgag ttttcatggg tcacgcgctt cagcgcagac
     4201 cttcgagctt gccgaccaat a
//
LOCUS       DATIML010000531         1659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1840241, whole genome shotgun sequence.
ACCESSION   DATIML010000531 DATIML010000000
VERSION     DATIML010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1840241"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1659)
                     /locus_tag="VLJ38_09185"
     CDS             complement(<1..>1659)
                     /locus_tag="VLJ38_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39731.1"
                     /translation="VSRPGASSPADAARPSSAALSASKLGQPRDTGKNPAAETSPEDT
                     LKSTGELVRRGQAALRDLQRIARHATIPPGLETLSQELPERRAELQTRIAETRDALRR
                     SRRAAWVRDIRYAFVEDAERIRGWQAEVQGSSTGITAGRTRTTELLTFWRRADELARE
                     ASVPPEVREQTKRVVEEGVRTELVLARAEALTIPLELTLSEMQDMTDAFLHFVDGQGP
                     NLLADAHERDFSVIGAVKGVLSLRDPLAAVRETSHRMWNNARLFVLNSAEQWMTHGVL
                     LVVLLLSMLSLRSHAGEWVGDERQGRIARRVVRHPFAATLLLGLVAGIAIYPAVPSLV
                     LMVADVLAAGAALVLFPSLLDPRLLRVGYVLGAFMLLDVVRLFVSELVPLDRLLLTFE
                     LTAASAALSSVLLTHRFQASRFAERSPRFYRAVAWAWLAGAGVGALGALFGYGSLAEI
                     LGAGVLVSMYLALIVAAGFAAAEGSVWVLTQDGLIGRLNAVHKHRSRVVQGVSRLLRW
                     PALLLWAHLSLGYLTLSDSADRLILHVLNASLELGSLKVSAGDI"
BASE COUNT          286 a          583 c          568 g          222 t
ORIGIN      
        1 cgatgtcgcc ggcggagacc ttcaggctgc cgagctcgag cgaggcgttc agcacgtgca
       61 aaatcaggcg atctgcgctg tcggagagcg tcaggtagcc gagcgacaaa tgcgcccaga
      121 gcaagagcgc gggccagcgc aagagccggg aaacgccctg cacgacgcgc gagcggtgtt
      181 tgtgcacggc gttcaggcgc ccgataaggc catcctgcgt gagcacccag acgctgccct
      241 cggccgcggc gaacccggcg gcgacgatca gcgcgaggta catcgagacg agcacgccgg
      301 ctccgaggat ttcggcgagg ctcccgtaac cgaagagcgc cccgagcgcg cccacgcccg
      361 caccggcgag ccaggcccac gccacggccc gatagaagcg gggcgagcgc tcggcgaagc
      421 gcgacgcctg aaagcggtgc gtgaggagca ccgagctcag cgcagcggac gcggccgtca
      481 gctcgaacgt caggagcagc cgatcgagcg gcacgagctc gctcacgaac agccgcacga
      541 cgtcgagcag catgaaggcg ccgagcacgt agccgacgcg caacagtcgc ggatcgagca
      601 ggctcggaaa cagtacgagc gcggcgcccg ccgccaacac atccgcgacc atcaatacca
      661 agctcggcac ggccgggtaa atcgcaatgc cagcgaccag gccgagcaag agcgtcgccg
      721 cgaacggatg gcgcacgaca cggcgcgcaa tgcggccttg gcgttcgtcg ccgacccact
      781 cgccggcatg tgagcgcaag ctcaacatgg agagcaggag cacgaccagg agtacgccgt
      841 gcgtcatcca ctgttcggcg ctgttcagca cgaacaggcg cgcgttgttc cacatgcggt
      901 ggctcgtctc gcgcaccgcc gccagcggat cgcggagcga tagcacgccc ttcaccgcgc
      961 cgatcaccga gaaatcgcgc tcgtgcgcgt ccgccagcag gttcggcccc tgaccgtcca
     1021 cgaagtgcag gaacgcgtcg gtcatgtcct gcatttcgga cagcgtgagc tcgaggggaa
     1081 tcgtcagtgc ctcggcccgc gccagcacga gctcggtgcg gacaccctcc tcgacgacgc
     1141 gcttggtctg ctcgcgtact tccggcggga cgctcgcttc gcgcgcgagc tcgtcggcgc
     1201 gccgccagaa cgtgagtaac tccgtcgtgc gcgtgcgacc cgcagtgatc cccgtgctcg
     1261 agccttgcac ctccgcctgc cagcctcgaa tgcgctccgc gtcttccacg aaggcgtagc
     1321 gaatgtcccg cacccaggcg gcgcggcgcg agcgccgcag ggcgtctctg gtttccgcga
     1381 tgcgcgtctg gagctcggca cgccgctcgg gcagctcttg ggagagcgtc tcgaggccgg
     1441 gtgggatcgt cgcatgacgc gcgatccgct gtaagtcgcg gagcgccgcc tgcccgcgcc
     1501 tcacgagctc acccgtcgat ttgagcgtgt cttcgggact cgtctcggcc gcgggatttt
     1561 ttccggtatc gcgcggctga ccgagcttcg acgcgctgag cgccgccgag ctggggcgtg
     1621 cagcgtcggc gggcgagctc gcgcccggcc tgctcacgc
//
LOCUS       DATIML010000532         1999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_685986, whole genome shotgun sequence.
ACCESSION   DATIML010000532 DATIML010000000
VERSION     DATIML010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_685986"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VLJ38_09190"
     CDS             <1..498
                     /locus_tag="VLJ38_09190"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU39732.1"
                     /translation="TFLLLFSAFGSVFDAALILVNVPFALIGGVVALAFAGMPLSVSA
                     AVGFIALLGQAVLNGVLVVAAIRARLTAGEPLYDAVIAGTRERLRAVLVTALLASLGL
                     LPAALSHAIGSETQRPIAVVVVGGTLSAALLTLIVLPVTFYLASRIREGLSARRLETQ
                     ATAGA"
     gene            515..805
                     /locus_tag="VLJ38_09195"
     CDS             515..805
                     /locus_tag="VLJ38_09195"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU39733.1"
                     /translation="MNIEVSHYEQPEHTDSVATDQDPVESHFFWVDAGDGGVPPPLDV
                     VERAYVARVLSHTSGKRLAAAHLLGISYPTFLKRLRELGFDRPAPRSTRNGT"
     gene            1330..>1999
                     /locus_tag="VLJ38_09200"
     CDS             1330..>1999
                     /locus_tag="VLJ38_09200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39734.1"
                     /translation="MRTKSLHLLGRLAALGAVAVATTWANDAAAATECGSLPHPLVVV
                     GSSAVKPFMTLLGPALAAQSSPISLIYQSPGSCAGQDAYFGAGTTTGTGLTVYDAQGT
                     SGLTCDITAAEGLAIDIAISDVFDATCPNSEAPSGVKDFHGPVQSMVFAVSKASSRQL
                     ISYEAAYLTFGLGADGGTYWNDVADIFVRDQNSGTQQMIAKAIDVPAARFQGTSGNGT
                     AIQTG"
BASE COUNT          305 a          713 c          632 g          349 t
ORIGIN      
        1 acgttcctgc tcctgttctc ggcgttcggc tccgttttcg acgcggcgct catcctcgtc
       61 aacgtgccgt tcgcgctgat cggcggcgtg gtcgcgctcg ccttcgcggg catgccgctc
      121 tcggtatccg cggccgtcgg cttcatcgcg ctgctcggcc aggcggtgct gaacggcgtg
      181 ctcgtcgtcg ccgcgattcg cgcgcggctc acggcggggg agccccttta cgacgcggtc
      241 atcgccggca cgcgcgagcg gctccgagcc gtgctcgtca cggcgctgct cgcgtcgctc
      301 ggacttttgc cggccgcgct gtcacacgcg atcggcagtg aaacccaacg accgatcgcc
      361 gtcgtcgtcg tcggcggcac gctgtcggcg gcgctgctca cgctgatcgt acttccggtg
      421 accttctact tggcgagtcg aattcgcgag gggctttcgg ctcgacgtct cgaaacgcaa
      481 gccacggcgg gagcctaaaa cctgcgaggt gcccatgaac atcgaagttt cccactacga
      541 acaacccgaa cacacggatt ccgtcgccac cgaccaagac ccggtcgaat ctcacttctt
      601 ctgggtcgac gcgggtgacg gaggcgtccc gccgcccctc gacgtcgtcg agcgcgcgta
      661 cgtcgcgcgc gtcctctccc acacgtcggg caagcgactc gcggcggcgc acctgctcgg
      721 gatctcgtac ccgacgttcc tcaagcgcct gcgcgagctc ggcttcgatc gacccgcgcc
      781 gcgctcgacg cgcaacggga cgtagtcgtc cgcgccgaac gcgcgcgaag ctcgcgggcg
      841 cgtcgaagcg cgagggcgaa gcgcgacgat gccgagcgtc accgctcggc aatggtcgtg
      901 ctcagcgctc gcgctcgaga ctcgctttta cccgcgcgca cggtctgaca ctcgtcgcgt
      961 acggcacttc gaacgcgcgt cgcgggtagg gacgtccgct gcgtacaccg ctcgcagcgt
     1021 cattgcgccg ctacctgcct ttcgaagcta cggacgcgtt cgcgagcgcg cgcgtcttag
     1081 aagcgtacct aggcgcgctc gtgtgccgcg ctcgtgtggc gccgctcgtg cgccgccgcc
     1141 aatgccggat tgcgcgaatg ccggccgaat tcgcagcgag cgctccttaa gcgtcactct
     1201 ctcgcgaggc gagcggccac gctttcgtca cacaaaaata acggaccggt cgcactccag
     1261 ggggtgacct catcctacat aggcggcgcg cttcaccccc tatctcgaag tgtcgaaagg
     1321 aagcttgcga tgagaaccaa gtcgcttcat ttgctcgggc gcctggccgc gctcggagcc
     1381 gtcgcagtcg cgacgacgtg ggcgaacgac gcggccgcgg ccaccgaatg cgggtcgtta
     1441 ccgcatccgc tcgtcgtcgt cggatcgtcc gccgtcaagc cgttcatgac cttgctcggc
     1501 cccgcactcg cggcgcaaag ctcgccgatc tcgctgattt atcagtcacc cggctcctgt
     1561 gccggccaag acgcttactt cggcgccggc acgacgaccg gcaccggcct cacggtctac
     1621 gacgctcagg gcacgagcgg tctcacgtgt gacatcacgg cggccgaggg cctcgcgatc
     1681 gacatcgcca tctcggacgt tttcgacgcg acttgcccga attccgaggc gccctcgggc
     1741 gtaaaggact tccacggtcc cgtgcagagc atggttttcg ccgtgtcgaa ggcgtcctcg
     1801 cgccagctga taagctacga ggcggcgtat ctcacgttcg gcctcggcgc ggacggcggc
     1861 acttactgga acgatgtcgc cgacatcttc gtgcgcgacc agaacagcgg cacgcagcag
     1921 atgatcgcga aagcgatcga cgtgcctgcc gcgaggttcc aaggcacctc gggcaacggc
     1981 accgcgattc aaaccggcc
//
LOCUS       DATIML010000533         1991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2993253, whole genome shotgun sequence.
ACCESSION   DATIML010000533 DATIML010000000
VERSION     DATIML010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2993253"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..1564)
                     /locus_tag="VLJ38_09205"
     CDS             complement(59..1564)
                     /locus_tag="VLJ38_09205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39735.1"
                     /translation="MTAGVALLAFVRVVRFGFVYDDGWTLVDNAWLTRPLPELVRLLV
                     SGEALARHVPDATRPVMVLVEALERRVFGLAPAGYHLDSLLLYALACLLATRLALVLT
                     RQKHVALCAGVFFALAPLHAEPVAAINYREDLLGALGVLGALLLLYSPDADSTRVNAG
                     QDTFIRRHYADSTARALGTGACLALGLFAKESAVAFVPLAGLIAFCLPWARVTLADRR
                     RHLYVLGAVLFVFLAWRVPLALHGDDVPLAPQRPFGAVLLRAARFEVRAVVDALLPFF
                     YSPDHWRQPDASFRWAPPCLSLFAGVALLGKNRELRVPALGIGIALLAPLACSPLFRP
                     VNEFADRYFFLGVLGGGIVWAWTLDRLLARFELDRARSFTPLVCLPLLAVTWQATSIW
                     RDERSLWTAATELTPASPRAWAGLSRVHRIARERDETDRAMARALNADPNYVPALVSE
                     LYNDLAFGRIETAREHLAALDARKLGNGGGIGKARRCAALEREAAAACIGP"
     gene            1771..>1991
                     /locus_tag="VLJ38_09210"
     CDS             1771..>1991
                     /locus_tag="VLJ38_09210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39736.1"
                     /translation="MPRFERATLAASGLTLAVALASWTLMRVHAFTLARCAAVSGAAV
                     LLAITLTWALRRRTGAVAASSRPNAALTR"
BASE COUNT          355 a          669 c          730 g          237 t
ORIGIN      
        1 aggcgtcgtc gttcccgaca cacaggctgc ttatcacgct tccgagcggc gtcagcgcct
       61 acggcccgat gcaggccgcc gcggcttcgc gttcgagcgc ggcacagcga cgcgctttgc
      121 cgatgccgcc gccgttgccg agcttccgcg cgtcgagcgc ggcgaggtgc tcgcgcgcgg
      181 tttcgatgcg gccgaaggcg aggtcgttgt agagctcgct cacgagggca gggacgtaat
      241 tagggtccgc gttcagcgcg cgggccatgg cgcggtcggt ttcgtcgcgc tcgcgagcga
      301 tgcggtggac gcgtgaaaga cccgcccaag cacgcgggga cgcgggcgtg agctcggtcg
      361 ccgcggtcca gagcgaccgc tcgtcgcgcc aaatcgaggt agcctgccac gtcacggcga
      421 ggagcggcaa gcagacgagc ggcgtgaatg aacgcgctcg gtcgagctcg aagcgcgcga
      481 gcaagcgatc gagcgtccag gcccagacga tgccgccgcc gaggacaccc agaaagaaat
      541 aacgatcggc gaattcgttc acgggccgga acaacggcga gcaagcgagc ggagcgagca
      601 gcgcgatacc gatcccgagc gcgggcacgc gcagttcgcg atttttgccg aggagtgcga
      661 cgccggcgaa cagcgagagg caaggcggag cccagcgaaa cgacgcgtcc ggctgccgcc
      721 agtgatcggg cgagtagaag aacggcagca gggcgtcgac gacggcgcgc acctcgaaac
      781 gtgccgcgcg cagcagcacg gcgccgaacg gccgctgcgg agcgagcggc acatcgtcac
      841 cgtgaagcgc cagcggcaca cgccacgcga gaaagacgaa cagcacggcg ccgagcacgt
      901 aaaggtgtcg ccgccgatca gcgagcgtca cccgtgccca cggcaagcaa aacgcgatca
      961 gcccggcgag cggtacgaac gcgaccgcgc tctctttggc gaacaagccg agcgccaggc
     1021 acgcgcccgt gccgagtgcc cgcgccgtgg aatccgcgta atgccgccgg atgaacgtat
     1081 cctgccctgc gttcacgcgg gtgctgtcgg catccgggga gtaaagaagc aggagcgcgc
     1141 cgagcacgcc gagcgcgccg agcaaatcct cgcggtagtt gatcgccgcg acgggttcgg
     1201 cgtgcagcgg cgcgagcgcg aagaacacgc ctgcgcacag ggccacgtgc ttttggcgcg
     1261 tcaggacgag cgcgaggcgc gtcgcgagca ggcacgcgag cgcgtagagg agcagcgagt
     1321 ccaggtggta acccgcgggc gcgagcccga agacgcgccg ttcgagcgcc tcgacgagca
     1381 ccatcacggg acgcgtggca tccggcacgt gacgcgcgag cgcctcgccg ctcaccagta
     1441 agcggacgag ctcgggcagg ggacgggtga gccaggcgtt gtcgaccagc gtccagccgt
     1501 cgtcgtaaac gaagccgaag cgtacgacgc ggacgaatgc gaggagcgcc actccggccg
     1561 tcacccacgc ggcgccgcga cgactgagcc cgagccggcg ggaacgcggg ggctcttcac
     1621 ttcgtaccga gggggcgcgt cgcttcacgg aaaggccggc gttgtcgtgc ccatgacggc
     1681 tcggtgcccg ccatcatgac gcacgcagcg gccgcagcgc aaacgggctt gtggcgacgc
     1741 gcgccacgtg gtcgtctaaa acgcgtgagg atgccccggt tcgagcgagc gacgctcgcg
     1801 gcctccgggc tcacactggc cgtcgccctg gcgtcgtgga cgctcatgcg cgtgcatgcg
     1861 tttacgctcg cccgctgcgc ggcggtgtcc ggcgccgccg tgctcctcgc catcacgttg
     1921 acttgggcac tacggcgccg gacaggggcc gtcgcggcaa gctctcggcc gaacgccgcg
     1981 ctgacgcggg a
//
LOCUS       DATIML010000534         2466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3857379, whole genome shotgun sequence.
ACCESSION   DATIML010000534 DATIML010000000
VERSION     DATIML010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3857379"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1156)
                     /locus_tag="VLJ38_09215"
     CDS             complement(<1..1156)
                     /locus_tag="VLJ38_09215"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU39737.1"
                     /translation="MVVSVLGATLLPDDAASPDSLVMFRNSSGLSGRGTLLHLTRHHV
                     AIEVYNPYSIVQLSEVLEDVRILRRGYAIYRGKAVVTTLVPTGAVTIVSATLVDAWSD
                     LRDVFDSDEVRAEAARFIEAWSAGSALEPGYQLAVNQLASFLEELSRWLGQAEIIYTA
                     QVGRDLGELVQEVWPPVEQKLVELFARFEHEASTILPDAVPMHKAFAQRELHPLLMCD
                     PFLHRSVTKPLGYAGDYQIVNMMLDATATTTSTYARIVSAFHLTRPPAVAHRNRVHRL
                     EALLRQEAERRAAHGGRLSVLNIGCGPAREVGRLLSSGFDASSISLTLVDFNEETLAF
                     AAAQLDKARERARIEVEIRTVHQSIHELLKTAASGRSELSQQFDFIYCAGL"
     gene            1493..2335
                     /locus_tag="VLJ38_09220"
     CDS             1493..2335
                     /locus_tag="VLJ38_09220"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSU39738.1"
                     /translation="MPTARASDELGPSFGRVLAGALATVLVVGELSIGGVWDLLRIPY
                     ARETVTRLGYPTYVLVILGACKLPAAVVLMVPGLRVLKEWAYAGAFVSYIVTASSHFA
                     VGDDLGAAFAPSVFAALVLVSKMLRAPVPGATARPTVRGERPLAYWLTTTILAVACLF
                     GGILWTLHAQPFIRIMLRLGYPEYFMSILGPAYLAAGVVLVVPRTPQLKEWAYAGLVF
                     NYVGAVASHLAVGDSVASVLVPCVLLVLALVSWALRPTARRSDGQGFGIGGSQPSEGA
                     GAPA"
BASE COUNT          377 a          781 c          850 g          458 t
ORIGIN      
        1 aaagacccgc gcaatagatg aagtcgaact gctggctgag ctcggagcgg ccgctcgccg
       61 ccgttttcaa gagctcgtgg atcgattggt gcaccgtcct gatttcgacc tcgatccgag
      121 cgcgttcgcg agccttatcg agctgtgcgg ccgcgaaggc cagcgtctcc tcgttgaaat
      181 cgacgagcgt gagggagatg ctcgacgcgt cgaagccgga gctcaagagc cgaccgactt
      241 cgcgcgcggg gccgcagccg atgttgagca cgctgaggcg gccgccgtgt gcggcacgcc
      301 gctcggcttc ttggcgtagc agcgcctcga ggcggtggac gcggttgcga tgcgcgacgg
      361 ccgggggccg cgtgaggtgg aacgcgctca cgattcgcgc gtaggtgctc gtcgtggtcg
      421 ccgtcgcgtc gagcatcatg ttgacgatct ggtagtcgcc cgcgtagccg aggggcttcg
      481 tgacgctccg atgcaggaac ggatcgcaca tgaggagcgg gtggagctcg cgctgagcga
      541 acgctttgtg catcggaacg gcgtcgggca aaatcgtgct cgcctcgtgc tcgaaacgcg
      601 cgaacagctc cacgagcttt tgctcgacgg gcggccacac ctcctgcacg agctcgccga
      661 gatcgcggcc gacctgagcc gtgtagatga tttcggcctg gcccagccag cgactgagct
      721 cctcgaggaa gctcgcgagt tggttgacgg caagttgata gccgggctcg agcgccgacc
      781 ccgcgctcca tgcctcgatg aaacgcgccg cttccgcgcg cacctcgtcg gagtcgaaaa
      841 cgtcgcgaag gtcggaccag gcgtcgacga gcgtcgccga aacgatcgtg acggcgccgg
      901 tcggcacgag cgtcgtgacg acggctttgc cgcgatagat cgcgtaaccg cgccgcagga
      961 tccgcacgtc ctcgagcacc tcgctcagct ggacgatgga ataggggttg taaacctcga
     1021 tggcaacgtg gtggcgcgtg agatgaagaa gtgttccgcg acccgaaagg ccgctcgagt
     1081 tccggaacat gaccaagctg tcgggtgacg ctgcgtcgtc gggcaataag gtggctccga
     1141 gtaccgagac aaccacgatt tttcagcgtc gtcgcccctg gctacgtgaa aagttctagg
     1201 cgatcgcgcg gcagacgccg tgctgcagcg ttccgcgttt tgccgcgctg ctgccggatc
     1261 gagccagcgt gtggcggcag gtgcgccaca ggtgggcggc ttggcgcgaa tcgacagcat
     1321 ccttggtgcc ttgtcggcgc ctgagggatg ttcgccggcg acgcactgaa tttccgccga
     1381 cgccagatcc gtactttagc ttggatcccg gggcgcgacg gagcagcggc gagaattctg
     1441 cgcaatgttg ccaagagatg gcctggtgct tgcctcgaag aacgctcgtt gcatgccgac
     1501 cgcgcgcgcc agcgacgagc tcggtccgtc cttcgggcgg gtgctcgccg gtgcgcttgc
     1561 gaccgtgctc gtcgtcggtg aactgagcat tggcggcgtg tgggatctgc tccgcattcc
     1621 ctacgcgcgc gaaacggtca cgcggctcgg gtatccgacg tacgtgctcg tcatccttgg
     1681 cgcctgcaag ctgccggcag ccgtggtctt gatggtgccc ggactgcgtg tgctcaagga
     1741 atgggcctac gcgggggcat tcgtttcgta catcgttacc gcgagctcgc atttcgcggt
     1801 cggcgacgac ctcggcgcgg cgttcgcccc cagtgtattt gccgcgctcg tgctcgtttc
     1861 gaaaatgctg cgcgcgccgg ttccgggcgc gaccgcccgc ccgacggttc ggggggaacg
     1921 cccgctcgcg tactggctga cgacgaccat cctcgcggtc gcttgccttt tcggcggcat
     1981 tctgtggacc ctgcacgccc agccgttcat tcggatcatg ttgcggctcg gctatccgga
     2041 gtacttcatg agtatcctag gcccggcgta cctcgccgcg ggcgtcgtgc tcgtcgtccc
     2101 ccgcacgccg caactcaagg agtgggcgta cgccgggctg gtcttcaact acgtcggagc
     2161 cgtcgcctca cacctcgccg tcggcgacag cgtcgcgagc gtgctcgtcc cgtgcgtgtt
     2221 gctcgtcctg gcgctggtat cgtgggcgct caggccgacc gcgcggcgca gcgacgggca
     2281 gggctttggt atcggcgggt cgcagccgtc ggagggagcg ggcgcgccag catgaagcgc
     2341 tattgggcgc gcagccaggc gcgcgcttct tcgaggttcg tgaaagcctg cgccacgacg
     2401 ccgagcttcg aataggtctc gatccagcga cgcatgttca tctgtccgag cactttttcc
     2461 ggcagc
//
LOCUS       DATIML010000535         2868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_395063, whole genome shotgun sequence.
ACCESSION   DATIML010000535 DATIML010000000
VERSION     DATIML010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395063"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..956
                     /gene="rsmI"
                     /locus_tag="VLJ38_09225"
     CDS             117..956
                     /gene="rsmI"
                     /locus_tag="VLJ38_09225"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HSU39739.1"
                     /translation="MPTLYVVATPIGNLGDLTPRAREALAASTRIFAEDTRRSRGLLA
                     YAGIANKTLVRVDAHATPERLARLVASLEANESVALVTDAGAPGVSDPGPALVRAAAE
                     AGVRVVPVPGASAVTAAIAASGLVDGPFLFLGFLPRHGKKRRRVLERVQKSPEPVILF
                     ESAQRIAETLRELATETPERAVALCRELTKMHEEILRGSLAELAALEREWLGEITLVL
                     GAGPEREDEEIAPDPALIDAEIASRLQKGAHPKDLATELAARLKIPRRSAYARVLAVR
                     DAG"
     gene            1047..1628
                     /locus_tag="VLJ38_09230"
     CDS             1047..1628
                     /locus_tag="VLJ38_09230"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HSU39740.1"
                     /translation="MAAIGVILASVREVRRGEAFAKWLLELAKSHANLEPELVDLRDW
                     PLPAYTYGVLPTGVEKLYVDGSLQSRWADRIRGFDGFIVVTPEYNRGYPGQLKHALDA
                     LYQAWNYKPVAWLSYGGAAGGSRAAAQLAQVAVELKMVPLREEVCINLIGLAVDPQGY
                     PTAEFYTKKAQLLLTELGYWTEVLKSGREHHPR"
     gene            1678..2646
                     /locus_tag="VLJ38_09235"
     CDS             1678..2646
                     /locus_tag="VLJ38_09235"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HSU39741.1"
                     /translation="MRVAHSFVSLLAALACVAFTLRARATYSIAAADTRTHATGGAGT
                     SCLHGDDVYVIYGGVPGLGTVHAQALLNEDARDEGVRLLASGATPSDVIARVTSPAFD
                     AYASLRQYGVVSVTGQSAGFTGADDQAYAADLQGAVGDFVYSVQGNFLTSRAVIDHAS
                     AAFEASGCDLPERLLHALEAGADGGEGDHRCTPDGLPSDSAFLEVELPESEPGSYLEL
                     RVPSSGNQSPLPELHAKFDRWRASHACPAVSGGDLGATAVSAAADAGGPGTDGQSGCA
                     CRLPHGRGPKNAPNPAGFVALASAVLTFRRRAKSPTRVRGSLPRLS"
     gene            2615..>2868
                     /locus_tag="VLJ38_09240"
     CDS             2615..>2868
                     /locus_tag="VLJ38_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HSU39742.1"
                     /translation="MFEALSRGFREAQNRLAGLAELNEKNVQAALREVRTSLLEADVE
                     LGVVKRFLEEVEQKALGTTVQTRVRHGGQTHAVTAGEQFV"
BASE COUNT          464 a         1002 c          957 g          445 t
ORIGIN      
        1 gcgcgcctca cgggcaagct gcgcgagtat ttgaagaaga cgctaggcga cgccgtcggc
       61 gtgggctgag cggcgccggc acgcgagacg cacgagagca gctggagccg cgcgccgtgc
      121 cgacgcttta cgtggttgcg acgccgatcg gaaacctggg cgatctcacg ccacgcgcgc
      181 gcgaggcgct cgccgcctcg acgcgtatct tcgccgagga cacgcgacgt tcgcgtggct
      241 tgctggccta cgcgggcatc gcgaacaaga cgctcgtccg cgtcgacgcc cacgcgacac
      301 ccgagcgcct cgcgcgtctc gtggcaagcc tcgaagcgaa cgagagcgtc gcgctcgtga
      361 cggacgcggg cgcgccgggc gtgagcgatc cgggccctgc gctcgttcgc gcggcggcgg
      421 aagcgggcgt acgtgtcgtg cccgttcccg gtgcgagcgc cgtcaccgcg gcgatcgccg
      481 cctccggtct cgtcgacggg ccgtttttgt tcctgggctt tctcccgcgg catgggaaga
      541 aacgacggcg cgtgctcgaa cgcgtgcaga agagtccgga gccagtgatt ctcttcgagt
      601 cggcgcagcg tattgccgaa acgttgcgtg agctcgccac ggaaacgccc gagcgcgcgg
      661 tcgcgctctg ccgcgagctc acgaagatgc acgaagagat cctgcgcggt tcgctcgcgg
      721 agctcgccgc gctcgagcgc gagtggctcg gtgaaatcac gctcgtcctc ggcgccgggc
      781 ccgagcgcga ggacgaagaa atcgcgcctg atccagctct catcgacgcc gaaatcgcga
      841 gtcgcttaca aaagggcgcg cacccgaagg acctagcgac cgagcttgcc gcgcgcctca
      901 agatcccgcg acggagcgcc tacgcgcgcg tcctagccgt acgggacgcg ggctgaggag
      961 cgttcaggtg ccaccagaag gtcgccacgg tcgcccacgc attttgcggt gcctgcgcat
     1021 ggctcacaaa tgttacttga accagtatgg cagcaatagg cgtcatctta gcgagcgtgc
     1081 gcgaggtccg gcggggcgaa gcgttcgcaa agtggctgct cgagctcgcg aaatcacacg
     1141 cgaacctcga gcccgagctc gtcgatctgc gcgactggcc gctgccggcg tacacctacg
     1201 gcgtgctgcc cacgggcgtc gagaagctct acgtcgacgg cagcctgcag tcgcgttggg
     1261 ccgatcgcat tcggggtttc gacggcttca tcgtcgtcac gcccgaatac aatcgaggct
     1321 accccggaca gctgaagcac gcgctcgatg ccctgtatca ggcctggaac tataaaccgg
     1381 tcgcgtggct cagttacggg ggcgcggcgg gcggctcgcg agcggccgcg cagctcgcgc
     1441 aagtcgccgt cgagctcaag atggtccccc tgcgcgagga agtctgcatc aacctgatcg
     1501 gcctcgccgt cgacccccag ggctatccga cggccgaatt ttacacgaaa aaagcgcagc
     1561 tcctcttgac cgagctcggc tactggacgg aagtcttgaa gagcggccgc gagcaccacc
     1621 cgcgctgagc acgggcttcg tctgcgcggg cgcgatacgc tccccgagtg acctcgcatg
     1681 cgcgtcgctc actcgttcgt ttcgctgctt gccgctctgg cgtgcgtcgc gttcacgcta
     1741 cgcgcgcgag cgacgtactc gatcgcagcc gctgacacgc gcacgcacgc gacggggggc
     1801 gccgggacgt cgtgcctgca cggcgacgac gtctacgtca tctacggcgg cgtccccggc
     1861 ctcggcacgg tgcacgcgca agctctcttg aacgaagacg cacgcgacga gggcgtgcgc
     1921 ctgctcgcga gcggcgcgac gccgtccgac gtgatcgccc gcgtcacgtc gcctgcgttc
     1981 gacgcctacg ctagcctacg ccaatacggt gtcgtctccg tgacggggca gagcgctggt
     2041 ttcacgggcg ccgatgacca agcctacgcg gccgatcttc aaggcgccgt gggcgacttc
     2101 gtttactccg tccaaggcaa tttcctcacg agccgcgccg tcatcgacca cgcgtccgcg
     2161 gccttcgaag cgtccggctg cgacttgccc gagcgcctgc tccacgcgct cgaagccggc
     2221 gcagacggcg gcgaaggcga ccaccgctgc acgccggacg gcctgccctc cgactccgct
     2281 tttctcgagg tcgagctccc ggagagcgag cccggcagct acctcgagct tcgcgtgccg
     2341 agctcaggca accaaagccc gttacccgag ctccacgcca agttcgaccg gtggcgggcg
     2401 agccacgcct gcccggcagt ttcgggcggg gatttagggg cgaccgctgt ttcggctgcc
     2461 gctgacgcgg gcggccctgg gacggacggc caaagcggct gcgcttgccg cctaccccac
     2521 ggccgaggcc ctaaaaacgc ccccaatcct gccggtttcg tcgccctcgc gagcgcggtc
     2581 ctcactttcc ggcgccgtgc taaaagcccg acccgtgttc gaggctctct cccgcggctt
     2641 tcgtgaagct cagaatcgtt tagctgggct cgccgagctc aacgaaaaga acgtccaggc
     2701 ggcgctgcgt gaagtgcgca cgtcgctgct cgaagccgac gtcgagctcg gcgtcgtcaa
     2761 gcgcttcctc gaagaggtcg agcagaaggc gctcggcacg accgtgcaga cgcgcgtgcg
     2821 tcacggcggg caaacccacg ccgtcaccgc cggcgagcag ttcgtgaa
//
LOCUS       DATIML010000536         3682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_972407, whole genome shotgun sequence.
ACCESSION   DATIML010000536 DATIML010000000
VERSION     DATIML010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972407"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1755)
                     /locus_tag="VLJ38_09245"
     CDS             complement(<1..1755)
                     /locus_tag="VLJ38_09245"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HSU39743.1"
                     /translation="MTQPMTELNEPQQQAVAHLDGPLLVFAGAGSGKTRAITYRVANL
                     LATRNVPPFRILAVTFTNKAAGEMRERLRGLAGDEVVRDLWVGTFHSVCARLLRRYHD
                     VVGLGRDFVIYDDSDQKAVMTRVLRDLGIDEEALPPKLVLSLVSREKREGRMPGHSKS
                     ELTASARQAYEAYQKALLRANAVDFDDLLLYVLTVAETPGVPGDELRNRFSYVLVDEF
                     QDTNLVQYRLVRALSFKTQNLCVVGDDDQSIYRWRGADVRLIRSFQHDFPNATVVKLE
                     QNYRSTGNIVNAALGVIEKADTRVEKKLWTAQDPGEKVVIRAVRDEREEATHVVGTVK
                     KLVARGVRADQMAIFYRVHAQSRALEEALRAADVPYQVLGGVRFFERAEVKDLIAYLR
                     LVQNPKSDADLERIVNVPARGIGDKTVDRLRDLAAERALPLIEALDVAVREEQVPTAA
                     KKKLEAFQKLMRELARDAPTLRPSELAEEILERTGYKQLLVAADDAESDARLGNLEEV
                     VGAIADYESDCEEQGEVATLGGWLERITLAAAVDAMKDAPKVSLMTVHTAKGLEFRAV
                     FLTGMEEEIFPYRGVSGRE"
     gene            1860..2897
                     /locus_tag="VLJ38_09250"
     CDS             1860..2897
                     /locus_tag="VLJ38_09250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39744.1"
                     /translation="MPRVPSAAPPSERALRSGALVELPASGALIPSGCACCGEPAAKT
                     VLTRAPNGEGLILGYCEECRGHVGRDATRKLAGAVASGLLGGGLALTLPFAPYPLPMT
                     ALAAVVFVAALVPELVVFAWPRRPAPGHTADGAAAHFVKDGVLLCANDRFAKELARAN
                     GVPFERARFRERRLVPGFFALPPLSVLAALVTLLISSPVVRIVNLGPERLFVDVDGRR
                     VATVDPTSVEAPTAGVEVRVTAGPHELVARTAEHEVSREEVSVRSAHAHLFAPASQGY
                     CFWLETAEYGRTRAGAVTREPLDTSDDFWVLPSDLGGWFRPAPAQSLAEARLTGGVVT
                     VLRQVPCGLDF"
     gene            3036..3560
                     /gene="grpE"
                     /locus_tag="VLJ38_09255"
     CDS             3036..3560
                     /gene="grpE"
                     /locus_tag="VLJ38_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020464718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HSU39745.1"
                     /translation="MNDSDPNSADDPAASAPTAPPGDPLALAQAETARLKDQLLRLAA
                     DFDNYKKRARRELADTAKMAREDVLKELLPVFDNLERATSHATQATDVKALTEGISMV
                     TRQFVDTLGKLGIERVAALGLPFDPTVHEAVQHLETTEYAPGTVAMELQAGYRQGDRV
                     IRPAMVVVAKPKPS"
BASE COUNT          550 a         1277 c         1255 g          600 t
ORIGIN      
        1 ctcgcggccg ctcacgccgc gatacgggaa aatctcttcc tccatccccg tcaagaacac
       61 agcgcgaaat tcgagtccct tcgcggtgtg taccgtcatc agcgacacct tgggcgcgtc
      121 tttcatggcg tccaccgccg cggcgagcgt gatgcgctcg agccagccgc cgagcgtcgc
      181 gacctcgccc tgttcctcgc agtccgactc gtagtcggcg atggcgccca cgacctcctc
      241 caggttcccg agacgcgcgt cgctctccgc gtcgtcggcc gcgacgagca gctgcttgta
      301 cccggtgcgc tcgaggatct cctcggcgag ctcgctcgga cgcagcgtgg gcgcgtcgcg
      361 cgcgagctcg cgcatgagct tctggaacgc ctcgagcttc ttcttggccg cggtcggcac
      421 ctgctcttcg cgcacggcta cgtcaagcgc ctcgatcagc ggcagcgcgc gctcggcggc
      481 gaggtcgcgc aggcgatcca cggttttgtc gccgatgccg cgcgccggca cgttgacgat
      541 gcgctcgaga tcggcgtcgc tcttcgggtt ctggacgagc cgcaggtacg cgatcaaatc
      601 cttcacctcg gcgcgctcga aaaagcggac gccgccgagc acctgatagg gaacgtcggc
      661 ggcgcgcagc gcttcctcga gcgcgcgcga ctgcgcgtgc acgcggtaaa aaatcgccat
      721 ttgatcggcg cggacgccgc gcgcgacgag cttcttcacc gtgccgacga cgtgcgtcgc
      781 ttcctcgcgt tcgtcgcgga cggcgcggat cacgactttt tcgcccgggt cctgcgcggt
      841 ccagagcttc ttctcgacgc gcgtatccgc tttttcgatc acgccgagcg cggcgttcac
      901 gatgttgccc gtcgagcgat agttttgctc gagcttgacc acggtcgcgt tgggaaagtc
      961 gtgttgaaag ctgcgaatca ggcgcacgtc ggcgccgcgc cagcgataaa tcgactggtc
     1021 gtcgtcgccc acgacgcaga ggttttgcgt cttgaacgag agcgcgcgca cgagccggta
     1081 ctggacgagg ttcgtgtcct ggaactcgtc gacgaggacg taggagaagc ggttgcggag
     1141 ctcgtcgcct gggacgcccg gggtctcggc gaccgtgagc acgtagagca gcaagtcgtc
     1201 gaaatcgacg gcgttcgcgc gcaaaagcgc cttctggtac gcctcgtacg cttggcgcgc
     1261 cgacgccgtg agctcgctct tcgaatgccc cggcatgcgg ccttcgcgct tttcccggct
     1321 cacgagcgag agcacgagct tcggcggcag cgcctcctcg tcgatcccga gatcgcggag
     1381 cacgcgtgtc atgacggctt tttggtcgga gtcgtcgtaa atcacgaaat cgcgcccgag
     1441 gccgaccacg tcgtgatagc ggcggagcag tcgcgcgcac accgagtgaa acgtgccgac
     1501 ccagagatcg cgcacgactt cgtcgccggc gagaccgcgc aggcgctcgc gcatctcgcc
     1561 ggccgctttg ttcgtgaacg tcaccgcgag gatccggaac ggcggcacgt tgcgggtcgc
     1621 gagcaggttc gccacgcgat acgtgatggc gcgcgtcttg ccgctgcccg cacccgcgaa
     1681 cacgagcagc ggaccgtcga ggtgcgcgac ggcttgttgc tgcggttcgt tgagctccgt
     1741 catcggctgg gtcaaggttc ggggttagca cgggcgcgcg cgccagggga cacgctcgcg
     1801 cgccggcgct cgcacgcggg cgctcgcaca cgggcgtgga gcgaggctaa ggtgcgagcg
     1861 tgccgcgcgt cccgtccgca gcgcctccgt ccgagcgagc attgcgctcg ggtgcgctcg
     1921 tcgagctacc ggcgtcgggc gcgctgatcc cgtcggggtg cgcctgctgc ggcgagccgg
     1981 cggccaaaac cgtgctgacg cgcgcgccga acggcgaagg gctcatcctc ggctattgcg
     2041 aggaatgccg cggccacgtc ggacgcgacg ccacgcgaaa gctcgcgggc gccgtggcct
     2101 cggggctctt gggtggtggg ctcgcgctca cgctcccgtt cgcgccgtac ccgctgccca
     2161 tgacggcgct cgccgcggtc gtgttcgtcg ccgcgctcgt gcccgagctc gtcgtgttcg
     2221 cctggccgcg ccgtcccgcg cccggtcaca cggcggacgg cgccgccgca cacttcgtga
     2281 aggacggcgt gctcctgtgc gcaaacgatc gcttcgccaa ggagctcgcg cgcgcgaacg
     2341 gcgttccgtt cgaacgggcg cgcttccgtg aacggcgcct cgtgcccggc ttcttcgcgc
     2401 tcccgccgct ctccgtgctc gcggcgttag tgacgctgct catcagctcg cccgtcgtgc
     2461 gcatcgtgaa cctcggcccc gagcggctct tcgtcgacgt cgacggccgg cgcgtcgcga
     2521 cggtcgaccc gacgagcgtc gaggccccga cggcgggcgt cgaagtgcgc gtgacggcgg
     2581 gtcctcacga gctcgtcgca cgcaccgccg agcacgaggt ctcgcgcgag gaggtcagcg
     2641 tccggagtgc acacgcgcat ctgttcgcgc ccgcgagtca gggctactgc ttctggctcg
     2701 agacggccga atacggccgc acgcgcgcgg gcgccgtcac acgcgagccg ctcgatactt
     2761 cggacgattt ctgggtcttg ccgagcgacc tcggcggttg gtttcggccg gcgcccgcgc
     2821 aatccctcgc ggaagcgcgg ctcacgggcg gggtcgtgac cgtcttgcgc caggtgccct
     2881 gcggcctcga cttctgagcc tgcgccgccg acggcgaaaa acgccccgtg gccggcgttg
     2941 gcaacacgag aagcgtggtt atactccggc ccgatatgag cgaagacaac ggccccggct
     3001 ctggcgcgga gatgcctcca ggtggtctaa acggcgtgaa tgactcggac ccgaacagcg
     3061 ccgacgaccc cgcggcctcc gcaccgacgg cgccgcccgg cgatccgctc gcactggctc
     3121 aagccgaaac ggcgcgcctc aaagatcagc tcttgcgtct cgcggcggac ttcgacaatt
     3181 acaaaaagcg cgcgcggcgc gagctcgccg atacggcgaa gatggcgcgc gaagacgtgc
     3241 tcaaggagct cctgcctgtg ttcgacaatc tcgagcgcgc gacgagccac gcgacccagg
     3301 cgaccgacgt gaaggcgctc acggaaggca tttcgatggt cacgcgccag ttcgtcgaca
     3361 cgctcggcaa actcggcatc gagcgcgtcg cggccctcgg gttgccgttc gatccgacgg
     3421 tccacgaggc ggtccagcac ctcgagacca ccgaatatgc ccccggcacg gtggccatgg
     3481 agctgcaagc aggctaccgt caaggtgacc gcgtgatccg gcccgcgatg gtggtcgtgg
     3541 ccaaaccgaa gccgagctga gcgccggctc gcgcgctgcg cgaaatactc ttagactgag
     3601 aaaagcatgg ggaagatcat cggtatcgac ctcggcacga cgaactcgtg cgttgccgtc
     3661 gtggaaggcg tgagcgcgtc cg
//
LOCUS       DATIML010000537         4252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1550471, whole genome shotgun sequence.
ACCESSION   DATIML010000537 DATIML010000000
VERSION     DATIML010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4252
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1550471"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1122)
                     /locus_tag="VLJ38_09260"
     CDS             complement(<1..1122)
                     /locus_tag="VLJ38_09260"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HSU39746.1"
                     /translation="MVVSQRLAVSADAFAVARLLADGEALALVCADRGRTVYVACAPS
                     DVSNALDPEPELARRAAQFGEIPRWIGVLPYEARRELERSGRAEVRPAPELLTPLWRR
                     YGCVVKITRDIEVIGDDARVVAELTERLTHGLNAGAPARRPLAVSLRQKPERGAAHAE
                     RIRRALEYVRSGDIYQVNLARRFELFVEGSALELLASLAVGILPPHALSLDWPELGVA
                     MASPELFLQLDADGHVATRPIKGTRPRSSDPALDRELARALELDPKERAELAMIIDVE
                     RNDLGRLAVPGSVRLTEPPCVEAHAEVHHRAATVTAALRPGVSRQELLAAMLPSGSVT
                     GAPKIRAMEIIAELEPARRGLYTGAGGFVRRDGGLELGMA"
     gene            complement(1135..2097)
                     /locus_tag="VLJ38_09265"
     CDS             complement(1135..2097)
                     /locus_tag="VLJ38_09265"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSU39747.1"
                     /translation="MQELDVLGARAKDPAARMPRAMVLAAGHGTRLRPLTDERPKPLV
                     PFGDATLLEHALARLGRDFLPAVVNVHHLPAVFFELTRPFAHAFEVIIEPDLRGTAGG
                     VAGARGRFDPGPVAVTNADVLATVDVARLLRETPDDGLCLAVTPRARGEGPIGLGPGG
                     RIVRLRGERFGEELEGADYVCSLGIGERVLACLPERGCLVGDVALPLARRGAPVVTLR
                     IQGELVAPGDSVAAYLDAHAVWLGQRTGGADSYVAPDAKLGADVELSRCVIGHGAEIR
                     GQGRCERVVAWPGARFSAPLADAVVTSSGRVVERPRLPPSANQW"
     gene            2174..2668
                     /locus_tag="VLJ38_09270"
     CDS             2174..2668
                     /locus_tag="VLJ38_09270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39748.1"
                     /translation="MSHRLRLSRSQRALRHLGLSSTAALVLFSALNPGCGTAAVGIDD
                     CRAIEQARCDAAAACQTVTDVAECKRFYRDQCLHGLPTAAPPRESVDECVAAIQNLTL
                     CVKVGGSKAELANCDPAVPAQHATLACEVVKAPERAYACSFLAGEPVSPPAAGGQGGQ
                     GGAE"
     gene            2728..3984
                     /locus_tag="VLJ38_09275"
     CDS             2728..3984
                     /locus_tag="VLJ38_09275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39749.1"
                     /translation="MSTRSIGVLAVPLAIVLLGGCSESTVPPATVYHPTLIGLSPAVF
                     IGSVPCVEANGAMRAYVGTVFNVEYLPDGSPVTTDDVTNGDAVVGGTESADGAAASCL
                     ADADPGSTPRAVVGFALPSTGPVDCHQSISVARVMQGQRYRAEIQGYDRGDLVALAPG
                     VPILVDPATGERVEPVWKFSCGDDCPERAVNYDLRAIGNCKLVQDKSAVSPGAPASVV
                     VATDAFAGATSCGAESGELDHFTVSYDEFGQSASATGACGDEIELDDVPVRGTLTLNV
                     FAFEAGNPEARWGTTCTAVPVAGLQVPVTCEPLHDQGSLVVDPLDALSALGSDCNALT
                     SLPAELRLELVQEAGVELPAEQQTAPRYVGPDTCAKDVRYSSLERGAVTVRATLSSGP
                     IELSRALCTANIAPAQTATAHCSLEP"
     gene            4014..>4252
                     /locus_tag="VLJ38_09280"
     CDS             4014..>4252
                     /locus_tag="VLJ38_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HSU39750.1"
                     /translation="MSLPRPGPALRGVLLALFAVWLAFAIGLNWAGAPDSLFLALCGN
                     TGAILHGQVWRLFTAPFMHEVRHDIGHVLWVLLGL"
BASE COUNT          664 a         1505 c         1463 g          620 t
ORIGIN      
        1 ggccatgccg agctcgagcc cgccgtcgcg ccggacgaac ccccctgctc ccgtgtagag
       61 gccgcgccgg gcgggctcga gctcggcgat gatttccatg gcgcggattt tgggcgcgcc
      121 cgtcacgctg ccgctcggca gcatcgcggc gagaagctct tgccgcgaga cgccgggacg
      181 gagcgcggcc gtgacggtcg ccgcgcggtg gtgcacttcc gcgtgcgcct cgacgcaggg
      241 cggctccgtg agccgcacgc tgccggggac ggcgagccgc ccgagatcgt tgcgctcgac
      301 gtcgatgatc atggcgagct cggcacgctc tttgggatcg agctcgagag cgcgcgcgag
      361 ctcccgatcg agcgcggggt cggacgagcg gggacgcgtg cctttgatcg gacgcgtggc
      421 gacgtgcccg tcggcgtcga gctgcaagaa gagctcaggc gacgccatcg cgaccccaag
      481 ctccggccaa tcgagcgaca gcgcgtgtgg cggcaggatg cccacggcga gtgaagcgag
      541 tagctcgagg gcgctgccct cgacgaagag ctcgaaccgg cgagcgaggt tcacttggta
      601 gatgtcaccg cttcgcacgt actcgagcgc gcggcggatc cgttcggcgt gggcggcacc
      661 gcgctccggc ttttgcctca ggctcaccgc cagcgggcgg cgggctggcg cgccggcgtt
      721 caacccgtgc gtgaggcgct ccgtgagctc agccacgaca cgagcatcgt cgccgatcac
      781 ctcgatatcg cgcgtgattt tgacgacgca tccgtaacga cgccagagcg gtgtcaggag
      841 ctcgggcgcg ggacgcacct cggcgcgtcc ggaccgttcg agctcacggc gagcttcgta
      901 gggcaagacc ccgatccacc tcgggatttc gccaaactgc gcggcacggc gcgcaagctc
      961 cggctctggg tccaaggcgt tcgagacgtc gctcggagcg cacgcgacgt agacggtgcg
     1021 gccgcgatcc gcgcaaacga gcgcgagcgc ttcaccgtcc gcgagcaggc gcgccacggc
     1081 gaacgcatcc gccgacaccg cgagccgctg cgaaacgacc atgcccgcgc gcgtctacca
     1141 ctggttcgcg gaggggggca gccggggccg ttcgacgacg cgtccgctgc tcgtgacgac
     1201 ggcgtcggcg agcggcgcgg aaaagcgcgc cccaggccat gccacgacgc gctcgcaacg
     1261 gccttgccca cggatttcgg cgccatgacc aatgacgcag cgggaaagct cgacgtcggc
     1321 gccgagcttg gcgtccggcg cgacgtagga atccgcgcct cccgtgcgtt gaccgagcca
     1381 gacggcgtgc gcgtcgaggt aagccgccac gctgtcgccc ggcgcgacga gctctccctg
     1441 gattcgaaga gtgacgaccg gcgcaccacg ccgcgcaagc ggcagcgcca cgtcgcccac
     1501 gaggcagccg cgctccggca agcacgcaag cacgcgttca ccgatgccga gggagcaaac
     1561 gtagtcggcg ccctcgagct cctcgccgaa gcgctcgccc cggagccgta cgattcggcc
     1621 gccgggaccg agcccgatcg gcccctcacc gcgcgctcgc ggcgtgacag cgagacagag
     1681 gccgtcgtct ggcgtctcgc gcaggagccg tgccacgtcc acggtcgcca gcacgtcggc
     1741 gttcgtgacc gcgaccgggc ccggatcgaa gcgccccctc gcgcccgcga cgccccctgc
     1801 ggttccacgc aaatcgggtt cgatgatcac ctcgaacgcg tgggcgaagg gtcgcgtcaa
     1861 ctcgaagaag actgccggca ggtggtgcac gttgacgacg gccggcaaaa aatcgcgacc
     1921 gaggcgcgcg agcgcatgct cgagcagcgt cgcatcgccg aacggcacga gcggcttcgg
     1981 gcgttcgtca gtgagcgggc gaagccgagt gccgtgaccg gccgcgagca ccatggcgcg
     2041 aggcatgcga gccgccggat ctttcgcgcg cgctccgagc acgtcaagtt cctgcacggg
     2101 agacggcgac ctttcggctg acccgcgcga aaacttcgcg cacgcgagcg gcccgtgata
     2161 acgcctcggg gccgtgtctc atcgtttgcg gctgagccgc agccaacgcg cgctcaggca
     2221 tctcggcctg agctcgaccg ccgctctcgt gttgttcagc gcgctaaacc ccggctgcgg
     2281 taccgcggcc gtaggcatcg acgactgccg cgccatcgag caagcgcgct gcgatgctgc
     2341 ggccgcgtgc caaacggtga ccgatgtcgc cgagtgcaag cgtttctatc gcgaccaatg
     2401 tcttcacggc ttgccgaccg ccgcgccgcc gcgagaaagc gtcgacgaat gcgtcgccgc
     2461 catccagaac ctcacgctgt gcgtcaaggt cggtggcagc aaggcggagc ttgccaattg
     2521 cgacccggcc gtgcccgctc agcacgcaac gctcgcctgt gaggtcgtga aagctcccga
     2581 gcgtgcttac gcctgctcct ttttggctgg ggagccggtg tccccgccgg ccgctggcgg
     2641 gcagggcgga cagggcggcg cggaatagac cccggcctcg ccgaaaaccc tcacccgtcg
     2701 cacaccgtgc tatgggcgct gctcttcatg tcgacccggt cgatcggcgt gctcgccgtt
     2761 ccgcttgcca tcgtcctcct cggcggctgc tccgagagca ccgtcccacc cgccaccgtc
     2821 taccacccga cgctcatcgg cctctcaccg gccgtcttca tcggttcggt cccctgcgtc
     2881 gaagcaaacg gcgccatgcg cgcgtacgtc ggtacggtgt tcaacgtcga atacctgccc
     2941 gacgggtcgc ccgtgaccac cgatgacgtc acaaacgggg atgcggtggt cggaggcacg
     3001 gagagcgcgg acggcgccgc cgccagctgt ctcgcagacg ctgatcccgg ctctacgccg
     3061 cgcgccgtcg tgggcttcgc actaccgagc accgggcctg tggattgtca ccaatcgatc
     3121 tcggtcgcgc gcgtgatgca agggcagcgc taccgcgccg agatccaggg ctacgatcgc
     3181 ggcgatctgg tcgcgctcgc gcctggtgtg ccgatcttgg tcgatccggc tacgggagaa
     3241 cgtgtcgagc ccgtgtggaa gttcagctgc ggcgatgatt gccccgagcg ggccgtcaac
     3301 tacgacttac gcgcgatcgg caattgcaag ctcgtgcagg acaagagcgc cgtgtccccg
     3361 ggcgcccccg ccagcgtggt ggtggcaacg gatgcgttcg cgggggcaac gagctgcggc
     3421 gcagaaagcg gcgagctcga tcatttcacg gtgagctacg acgagttcgg gcagagcgcg
     3481 tcagcgacgg gagcgtgcgg agacgagatc gagctggacg acgtgccagt tcgtggcacg
     3541 ctcactttga acgtgttcgc attcgaagca ggcaaccccg aagcacgctg gggcacgacc
     3601 tgcacggccg tgcccgtcgc gggactccag gtgcccgtca cgtgcgagcc gctccacgac
     3661 caggggtcgc tcgtcgtgga tccgctcgac gcactgtccg cgctcggcag cgactgcaac
     3721 gcgctgacga gcctccccgc tgaacttagg ctcgagctcg tccaagaagc gggcgtcgag
     3781 ctaccggccg agcagcagac ggcgcctcgc tacgtcggcc ccgacacgtg cgcaaaagac
     3841 gtgcgctact cgagcctcga acgcggcgcg gtcacggtgc gggccacgct gtcgtcgggt
     3901 ccgatcgagc tcagccgcgc gctttgcacg gcgaacatcg ccccggcgca gaccgccacc
     3961 gcccactgct ccctggagcc ctaatgccga gaagctacgg agacccgccg accatgagcc
     4021 taccgcggcc cggtccggct ctccgcggcg tgctgctcgc gctgttcgcc gtttggctgg
     4081 cgttcgcaat cggcctgaac tgggcgggcg caccggattc gttgttcctc gcgctgtgcg
     4141 gcaacacggg cgcgatcctg cacggccagg tgtggcgcct attcaccgca cccttcatgc
     4201 acgaggtgcg gcacgacatc gggcacgtgc tctgggtcct gctcgggctc ta
//
LOCUS       DATIML010000538         2275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4729401, whole genome shotgun sequence.
ACCESSION   DATIML010000538 DATIML010000000
VERSION     DATIML010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4729401"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1090
                     /locus_tag="VLJ38_09285"
     CDS             <1..1090
                     /locus_tag="VLJ38_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39751.1"
                     /translation="LEPFLDVVSYIYRNDPNYVRALDFDMKQRLSKKNPFFEHAEGVV
                     LTAHRNGFCVGRATAQIDRAHLALHRDDAGFFGFFDTIDDQEVAKALLDAAAAWLRER
                     GMKRMRGPISLGINEELGCLVDGFDTPPMILMQHHLPYQGGLIEHAGLAKLKDFYAWR
                     YVVGDIPPRARKAHDEIEALPEVKSRHIDMKNFERDLRIVVDVFNDAWTDNWSFVPYS
                     EAEVLRMGEELKLIAIPALSYITEVDGEPAAVAVALPNINEVIRDLDGKLLPTGLAKL
                     LWRLKVVGPKTARLALLGIRRKYRGVRKYAGLSTYIYAKMNRAGRDVGIQWGELSWTD
                     EDNAPVNVGIRFMGGKIYKRYRVYERGL"
     gene            1127..2113
                     /locus_tag="VLJ38_09290"
     CDS             1127..2113
                     /locus_tag="VLJ38_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU39752.1"
                     /translation="MTVLVTGGSGFLGSHIVERLSRAGRPVRALVRTSSDTRFLRSLP
                     GVELIEGAIDDLASVRRAAAGVSGIVHAAGLVKARSTDEFMRVNRGGTENLLDAALEN
                     KATVRRFVLVSSLAALRPSDANGAPIPEDAEPRPVTDYGKSKLAAERAALARKADLSL
                     VILRPPAIYGPRDREILAFFKSIKLGVLPLLGSTQNRLSMIYGSDCAAACVAALDRDV
                     PSGSAYHVDDGSVHTLEELIMFAEAALGQKAKFRFHLPRRLVETAAFGAELYGRATNR
                     AVMLTRDKLNELFEQWVCDSTRARRELAWNPEVGFEEGVKRTVASYLEAGWL"
BASE COUNT          398 a          774 c          736 g          367 t
ORIGIN      
        1 gctcgaaccc ttcctagacg tcgtctccta catttatcgg aacgatccga actacgtccg
       61 ggcgctcgac ttcgacatga agcagcggct cagtaagaag aatcccttct tcgagcacgc
      121 cgaaggcgtc gtgctcaccg cgcacaggaa cggcttctgc gtcggccgcg ccacggctca
      181 aatcgaccgg gcgcaccttg cgctccaccg cgacgacgcc ggcttcttcg gcttcttcga
      241 taccatcgac gaccaggagg tcgccaaggc gctgctcgac gccgccgcgg cgtggctccg
      301 cgagcgcggc atgaagcgga tgcgcggccc gatttcactc ggcatcaacg aggagctcgg
      361 ctgcctggtc gacggcttcg acacgccccc catgatcctg atgcagcacc acctgccgta
      421 tcagggcggg ctcatcgagc acgccggtct cgcgaagctc aaggattttt acgcctggcg
      481 ttacgtggtc ggcgacatcc ccccacgcgc gcggaaagcc cacgacgaaa tcgaggcgct
      541 gcccgaggtg aagtcgcgcc acatcgacat gaagaatttc gagcgcgatt tgcgtatcgt
      601 ggtcgacgtc ttcaacgacg cctggaccga caattggtcg ttcgtgccgt attcggaggc
      661 cgaggtcctg cgcatgggcg aagagctgaa gctcatcgcg attccggcgc tttcgtacat
      721 caccgaggtc gacggtgagc ctgccgccgt ggccgtggcg ctgccgaaca tcaacgaggt
      781 gatccgcgat ctcgacggca agctcctacc cacgggactt gcgaagttgc tctggcgcct
      841 caaagtcgtg ggcccgaaga ccgcgcggct cgcgctgctc ggcatccgcc ggaagtaccg
      901 cggcgtgcgc aagtacgcgg gcctcagcac ctacatctac gcgaagatga accgcgccgg
      961 gcgcgacgtc ggcattcagt ggggcgagct ctcctggacc gacgaggaca acgcgcccgt
     1021 caacgtcggc atccgcttca tgggcggcaa gatctacaag cgctaccgcg tgtacgagcg
     1081 cgggctatag ctccgagaca caaccgatga cctccaaggc tcgaccatga ccgtgctcgt
     1141 cacgggcggc agcggctttc tcggctcgca catcgtcgaa cggctctcgc gcgccggacg
     1201 gcccgtgcgt gccctcgtgc gcacgagcag cgacacgcgc tttttgcgtt cgctcccggg
     1261 cgtcgagctg atcgagggcg cgatcgacga tctcgcgagc gtgcggcgcg cggccgcggg
     1321 cgtgagcggc atcgtgcacg ccgccggcct cgtgaaggcg cgtagcaccg acgagttcat
     1381 gcgcgtcaat cgcggtggca cggagaacct gctcgacgcc gcgctcgaga acaaagcgac
     1441 ggtgcgccgt ttcgtgctcg tctcgagcct cgcggcgttg cggccgagcg acgcgaacgg
     1501 cgcgcccatc cccgaggacg ccgagccgcg ccccgtgacc gactacggca agagcaaact
     1561 tgcggccgag cgcgccgcac tggcgcgcaa ggccgatctg agcctcgtga tcctgcggcc
     1621 gccggcgatt tacggcccgc gcgaccgcga aatcctggcg ttcttcaaat cgatcaagct
     1681 cggcgtgctg ccgctgctcg gctcgactca gaaccggctc agcatgatct acggcagcga
     1741 ctgcgccgca gcgtgcgtcg ccgcgctcga tcgcgacgtc ccgagcggct cggcctatca
     1801 cgtcgacgac ggcagcgtgc acacgctcga agagctcatc atgttcgccg aagcggccct
     1861 ggggcagaaa gccaagtttc gctttcactt gccgcggcgc ctcgtcgaaa cggcagcgtt
     1921 cggcgccgag ctctacggtc gcgccacgaa ccgcgccgtg atgctcacgc gcgacaagct
     1981 gaacgagctc ttcgagcagt gggtgtgcga cagcacgcgt gcgcggcgcg agctcgcttg
     2041 gaacccggag gtcggcttcg aagaaggcgt gaagcgaacg gtcgcgtcgt atctcgaagc
     2101 cggttggctt tagtccgggc gcagggccgg tgcgcgttcg cctgtgacgg cgacacgcga
     2161 ttgtcatccg agagcccgtt cagtcctact gaaagacatc gggacgtctt cgcttagccg
     2221 ccggaagcgc acgtcgaacc gctcgggacg ccgaaaagtg aacgtcggcg gaacc
//
LOCUS       DATIML010000539         6122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5017629, whole genome shotgun sequence.
ACCESSION   DATIML010000539 DATIML010000000
VERSION     DATIML010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6122
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5017629"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1848)
                     /locus_tag="VLJ38_09295"
     CDS             complement(<1..1848)
                     /locus_tag="VLJ38_09295"
                     /inference="COORDINATES: protein motif:HMM:TIGR02148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4215 domain-containing protein"
                     /protein_id="HSU39753.1"
                     /translation="MRPFVSNRFALCALFVASLASARCGGNPVVSGTPPSGIGTGGGS
                     SSGGTRASGGSAGTGTRIQVGDAGMSGDDAGGQGGDAAVEPTCGDGLLNQAFEVCDDG
                     NVDSSDGCTADCRQLEANYACPTPGEPCVSTVACGDGKITGAETCDDGNAEPGDGCDD
                     ACELEDGWSCPFQGLACEASHCGDGVLAGLEECEWDPRGARPDGCSETCKIETGYDCD
                     PATFTCTATDCGNGKLERGEQCDDRNAAPFDGCYHCLLEPNCTDGVCTAICGDGQRFA
                     GEECDDGNTRSGDGCSVACKIESGFECEDVTNDPPDSIAQPVLVRDFIGVDRSTDKTT
                     FPEHPDFNRLTGSGTLGEVETLLDDDGKPVYACPNGDCDANPGHQQVSCVGSSPCRPN
                     LSTPENFAEWYRDVDNVNLTVPSEVPLTRQAGGEYLYDSADTSQDGKDYFDLIGTGGW
                     VEKGGETLAPCGGGSTPDRNVSFTSETHFWFEYQGGERFDFAGDDDTWVFVNGQLALD
                     IGGLHVPKSGYFVLDDTNGTATVWSQVEQEQASRGAHAVDLGLSMGGIYEVTMFQAER
                     NECGSNFKLTLKNFNRPRSTCASVCGDGIVASDELCDDGPDGNDGNYGHC"
     gene            complement(2087..2803)
                     /locus_tag="VLJ38_09300"
     CDS             complement(2087..2803)
                     /locus_tag="VLJ38_09300"
                     /inference="COORDINATES: protein motif:HMM:NF025594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4336 domain-containing protein"
                     /protein_id="HSU39754.1"
                     /translation="MDVRELVRDQIWLAAYPVSLAGARFEARMTLVRRSDGALVVHSP
                     GPVDDSTRARIEAIGRVAVIVAPGNFHHLHVASCQRAFPEAETWICPGVERKQPALRY
                     DGFLGDSPPACLVQDFTLVGVFGRLMSEVAMLHAPSRTLLLVDLIENIGDETPRINWL
                     LKACWKLLGMWNVPVPAPEYRFGWRHRAAAHAALEKVVTWDFERIVIAHGDLIERDAK
                     ATAERAWRRYLPAAHASPSG"
     gene            complement(2863..3690)
                     /locus_tag="VLJ38_09305"
     CDS             complement(2863..3690)
                     /locus_tag="VLJ38_09305"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU39755.1"
                     /translation="MRILVTGATGKVGSRLSKRLAQRGDRVRGLVRDRKRALDVCDAR
                     LELAEGDLLEVDSLAAALRGVDVVVHCAAFFRGATAEQAHAVNDLGTQHLAHAARAAA
                     VKRFIFTSTGLVYGPSGGRLAQEDDPCAPTAAYPQSKLAAERFLLALEGLDVRVLRLP
                     FVYGDGDPHIAEAISMLRGFPRRQRMSLGHHADVAQAVARVLDMPSPPHRVYNVVDDE
                     APELAAIFASVGEPPPDGSNAETARAFDTLLDGRRIRQDLGFEPEFPRLADAVARGA"
     gene            4052..4573
                     /locus_tag="VLJ38_09310"
     CDS             4052..4573
                     /locus_tag="VLJ38_09310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU39756.1"
                     /translation="MSDAVLGVPASVMAARIVALEDLWGDAATRRLCDRLAGAADPLG
                     AARILESAIAERLRAAPKPGARAELALAAADRLTSANVRTVADELGVSERHLRRVFRA
                     TVGVSPKSFSKLTRFERALRAARENARASWAGIAALAGYYDQAHLIADFRAIAGVTPR
                     ALLDELRAGPPLV"
     gene            4674..5402
                     /locus_tag="VLJ38_09315"
     CDS             4674..5402
                     /locus_tag="VLJ38_09315"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSU39757.1"
                     /translation="MSEIESAPFAYEAANQKYLGLFVARRGAEPSAAFVLLPDWRGQS
                     PLAHEHAQFLVEQGCAVVIGDLYGDGFNPTEPSQVGDMVKRLLENRERGVAALAACVT
                     ALRGRLRAGLPIFCLGYSAGGMVALDYGRTGADLSGIIVASALLKTAAPGTSSHIKAP
                     VLMLQGTQDQVSPMAVIASVVAEMDAAGNDFRLELYGQTHHAFDNPEAGTDPHARLVH
                     SPAAAARSRRAIAEFVREKTQLVT"
     gene            complement(5399..5890)
                     /locus_tag="VLJ38_09320"
     CDS             complement(5399..5890)
                     /locus_tag="VLJ38_09320"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HSU39758.1"
                     /translation="MVELSRRARKMASDCPGFRLRQASRVIAKIYDDALRPVGLQLTQ
                     LPVLTALAVFGEAGATMNALAQAVVMDRTTLTRNVRPLEKAGLLRVARSAEDARARVV
                     LLTRAGERTLEAAFPLWESAVKRVRATLGAEGLAELQARLDEVIAMRTSAVGGVASSK
                     PTG"
BASE COUNT          972 a         2095 c         2054 g         1001 t
ORIGIN      
        1 gcagtgtccg tagttgccgt cgttgccgtc cggtccgtcg tcgcagagct cgtcggacgc
       61 gacgatgccg tcgccacaca cggaggcgca ggtcgacctc ggccgattga agttcttgag
      121 cgtcagcttg aagttcgagc cgcattcgtt gcgctcggct tggaacatcg taacttcgta
      181 gatgccgccc atgctgagcc cgagatccac ggcgtgcgct ccgcgcgagg cttgttcttg
      241 ctcgacttga ctccacaccg tcgcggtccc gttcgtgtcg tccaagacga agtagccgct
      301 cttcggcacg tgtagtccgc cgatgtcgag ggcgagctgc ccgttcacga acacccaggt
      361 gtcgtcgtcg ccggcaaaat cgaagcgctc gcccccctgg tactcgaacc agaagtgcgt
      421 ttcggaggtg aaggaaacgt tgcggtccgg cgtactgccg cctccacaag gtgccagcgt
      481 ctccccgccc ttttcgaccc aaccgcccgt gccgatgagg tcgaagtagt ccttcccgtc
      541 ttgtgacgtg tcggcactgt catacaggta ctcgccgccg gcttggcgag tgagagggac
      601 ctcactcggg acggtgagat tgacgttgtc gacgtcgcga taccactcgg cgaagttctc
      661 gggtgtcgat aggttcgggc gacaggggct gctgcccacg cagctcacct gctgatgtcc
      721 cgggttcgcg tcgcaatcgc cgttcgggca cgcgtaaacg ggtttgccgt cgtcgtcgag
      781 cagcgtctcg acttcgccca gcgtgccgct acccgtgagg cgattgaagt ctggatgttc
      841 ggggaaggtc gtcttgtcgg tgctgcgatc gacgccgatg aagtcgcgga ccagcacggg
      901 ctgcgcaatg ctgtccggtg gatcgttcgt cacgtcctcg cactcgaacc cgctttcaat
      961 cttacacgct accgagcagc cgtcgccgga acgagtgttg ccgtcgtcgc actcctcgcc
     1021 cgcgaagcgc tggccgtcgc cgcagatcgc cgtgcagacc ccgtccgtac agttcggctc
     1081 gagcaggcaa tgatagcaac cgtcgaacgg cgccgcgttt cgatcgtcgc actgctcgcc
     1141 gcgttcgagc ttgccgttgc cgcaatccgt agccgtgcac gtgaacgtcg ccgggtcaca
     1201 gtcgtagccc gtctcgattt tgcaagtctc ggagcagccg tccggccgcg ctccgcgcgg
     1261 atcccactcg cactcctcca accccgcgag cactccgtcg ccgcagtggc tggcttcgca
     1321 cgcaagcccc tggaaaggac agctccagcc gtcctcgagc tcacaggcgt catcacaacc
     1381 atcaccgggc tcggcatttc cgtcatcgca cgtctcggcg cccgtgattt ttccgtcgcc
     1441 gcacgcgacc gtggagacgc agggctcgcc gggcgtcggg caggcgtagt tggcctcgag
     1501 ctgccggcaa tccgccgtgc agccgtcgga ggagtcgacg ttgccgtcgt cgcaaacctc
     1561 gaaggcttgg ttcaagaggc catcgccgca cgtgggctcg actgcggcgt cgccgccctg
     1621 cccgccggcg tcgtcgccgc tcatgcccgc gtcgccgact tgaatccgag tgcccgtccc
     1681 ggccgagccg ccgctcgcgc gggtgccgcc actgctgctg ccgccgccgg ttccaatccc
     1741 gctcggcggc gtgccgctga ccacggggtt gccgccacag cgagccgacg cgagcgacgc
     1801 gacgaagagc gcgcaaagag cgaaccgatt ggatacgaat ggtcgcatga cgaatcgaaa
     1861 ccccgcatcg aaccatatcg catccgctcc actgctcccg tgaatttcgt cgcgcgcgac
     1921 gactatggag cgccggaagc ggcacgcaac gcgcatacat gtggcgcggc gatacgtggg
     1981 gcgcacaccc tctgcgtgct cgtcccacag tacctcgatt tcgatcgcgc cgagtgagcg
     2041 ttcggcctcg cgtaccggtg ccgtgatgtc gacgcgcggc tcgcctctag ccgctcggcg
     2101 acgcgtgcgc cgcgggcagg tagcgccgcc acgcgcgctc tgcggtcgcc ttggcatcgc
     2161 gctcgatgag atcgccgtgc gcgatgacga tccgctcgaa gtcccacgtg acgaccttct
     2221 cgagcgccgc gtgggctgcg gcgcggtgcc gccagccgaa ccggtactcc ggcgccggta
     2281 cgggcacgtt ccacatgccc aagagcttcc agcacgcctt gagcagccag ttgatgcgag
     2341 gcgtctcgtc accgatattc tcgatgagat cgacgagcaa aagcgtgcgg ctcggcgcgt
     2401 ggagcatcgc cacctcggac atgagccgcc cgaacacgcc cacgagcgtg aagtcctgaa
     2461 ccaagcaagc gggcggcgag tctccgagga agccgtcgta acggagcgca ggctgcttcc
     2521 gctcgacgcc agggcagatc cacgtctcgg cttccgggaa cgcgcgctgg caagacgcga
     2581 cgtgaaggtg atggaagttg cccggggcca cgatcacggc cacgcgtcca atcgcttcga
     2641 tccgagcacg cgtgctgtcg tccaccggac cgggcgagtg cacgaccagc gcgccgtcgc
     2701 tccgccgcac gagcgtcatg cgcgcctcga agcgggcgcc ggcgaggctc accggatacg
     2761 ccgccagcca gatctgatcg cgaacgagct cgcggacgtc catcggcccg attatacgcg
     2821 cggcttaccg agagggcccg gcccttgcgc tcgccgcgga actcatgcgc cgcgggcgac
     2881 cgcgtctgcg aggcgaggga actcgggttc gaaacctagg tcttggcgga tgcggcgacc
     2941 gtcgaggagc gtgtcgaaag cgcgcgctgt ctcggcgttc gagccgtcag gcggcggctc
     3001 acccacggac gcgaagatcg cggcaagctc gggcgcctcg tcgtcgacca cgttgtacac
     3061 gcgatgcggc ggcgacggca tatcgagcac gcgagcgacg gcttgcgcga cgtcggcgtg
     3121 gtggccgagc gacatgcgct ggcgccgcgg gaagccgcgc agcatggaga tggcctccgc
     3181 gatgtgcgga tcgccgtcgc cgtagacgaa gggtagccga agcacgcgca cgtcgagacc
     3241 ttcgagcgcg aggaggaagc gctcggcggc gagcttgctc tgcgggtatg ccgcggtcgg
     3301 tgcgcacggg tcgtcctctt gcgcgaggcg gccaccactc gggccgtaga ccaagcccgt
     3361 actcgtgaag atgaaccgct tcacggcggc ggcacgggcc gcatgcgcga ggtgctgcgt
     3421 gccgagatcg ttgacggcgt gcgcttgctc ggcagtcgcg ccgcggaaga acgccgcgca
     3481 gtggaccacg acatccacac cccgcagcgc ggccgcgagc gagtccactt cgagcaaatc
     3541 accctcggcg agctcgagac gcgcgtcgca gacgtcgagg gcgcgcttcc gatcgcgcac
     3601 gagaccacgc actcgatcgc cgcgctgggc gagtcgtttg ctgagtcggc tgccgacctt
     3661 tccggtggct ccggtgacga ggatcctcat gcgcaaaacc taggcgccgg cgctcggcgc
     3721 ggcttggaaa aaacggacca gggtgcctcg cgaccttgcc gagcgcggcg cgcgcactaa
     3781 gaatcttggc atgcacgcgc gcgacgttcg ccccggacgc atcgtgccga ccgccgcaaa
     3841 tgcgtccgtc gtggcggctc tgttcgttca tgagtgcgat cgcgacgctc cccgggtctc
     3901 gatcccccgt ccagaagtgc atctggtcgc tcgctttggg ccgtcggcgc ggcgtggtct
     3961 cgacgtacac gccttcggtg gacgcgagcg ggtacaccgg aaagtcattc gcggcgggca
     4021 atgggccgtg accgcgcggc tgcaactggg cgtgtccgac gcggtgcttg gcgtccccgc
     4081 ctcggtgatg gctgcgcgca tcgtcgcgct cgaggatctg tggggggacg ccgcgacgcg
     4141 gcgattgtgc gatcggcttg ccggcgcggc cgacccgctc ggcgcagcga gaatcctgga
     4201 gagcgcgatc gccgaacgcc ttcgggccgc gccgaagcct ggcgcccgcg ccgagctcgc
     4261 gctcgctgcc gcggatcgac tcacgagcgc caacgtgcgc accgtcgccg acgagctcgg
     4321 cgtgagcgag cggcacctcc gtcgcgtgtt ccgcgcgacc gtcggcgtga gcccaaagtc
     4381 gttcagcaag ctcacgcgct tcgagcgcgc gctccgcgca gcacgcgaaa acgctcgcgc
     4441 gagctgggca ggcatcgccg ctctcgccgg ctactatgac caagcgcatc tcatcgccga
     4501 cttccgcgcc atcgcgggcg tgacgccgcg cgcgctcctc gacgagctcc gcgcgggtcc
     4561 gccgctcgtc tgagttgcac gcggcgaaac gggcgccatg gggggccacg gccgcgacgc
     4621 gaccatgctt cgggttctgg cgacggacca gtgcgcgcgc tacgctcggt cgcgtgtcgg
     4681 agatcgaaag cgctcccttc gcgtacgagg ctgccaacca gaaatatctc ggtctattcg
     4741 ttgcgagacg gggcgcggag ccgtccgccg cgttcgtgtt gctgcccgat tggcgcggac
     4801 agagcccgct cgcgcacgag cacgcgcaat ttctcgtcga gcagggctgc gcggtcgtga
     4861 tcggcgacct ctacggcgac gggttcaacc cgacggagcc gagccaggtc ggcgacatgg
     4921 tgaagcgcct gctcgagaac cgcgagcgcg gcgtcgcggc gctcgccgcg tgcgtcaccg
     4981 cactcagggg gcgcctgcgc gccgggctcc cgatcttttg cctcggctac agcgccggcg
     5041 gcatggtcgc gctcgactac gggcggactg gcgcggatct gagcgggatc atcgtcgcgt
     5101 ccgcgctcct caagacggcc gcgcccggca cgtcgagcca tatcaaagcg cccgtattga
     5161 tgctgcaagg cacgcaagat caggtgtcgc cgatggccgt catcgcgagc gtcgtggcgg
     5221 agatggacgc ggcgggtaac gacttccgcc tcgagctcta tgggcaaacc catcatgcgt
     5281 tcgacaatcc ggaagcgggg acggatccgc acgcgcgcct cgtccattcg cctgctgcag
     5341 cagcccgctc tcggcgtgcg attgccgaat tcgtgcggga aaagacgcag cttgtaacct
     5401 agcccgtagg ttttgaggaa gcgaccccgc cgacggcgct ggtccgcatc gcaatgacct
     5461 cgtcgagacg cgcctggagc tcggcaagtc cctccgcgcc cagcgtggcg cgaacccgct
     5521 tgacggcgct ctcccacaac gggaacgccg cctctagtgt gcgctcgccc gcgcgggtca
     5581 ggagcacgac gcgcgcccga gcgtcttcgg cggagcgcgc gacgcgaagg agcccagcct
     5641 tctcgagagg tcgcacgttg cgcgtgagcg tggttcgatc catgacgacg gcctgagcga
     5701 gcgcgttcat cgtggccccc gcttctccaa agacggccag ggcggtcagg actggaagtt
     5761 gagtcaactg caaccccacg ggccgaagcg cgtcgtcgta gatcttcgcg atcacgcgtg
     5821 atgcctggcg cagacgaaag cccggacaat cgctagccat cttccgtgca cggcgggaaa
     5881 gctcaaccat atagagtgta tacgcactct agtgcggcgt gtcgacgtgg tattagcagt
     5941 ttgctcgcac cgcagggatg aagacaaaag attccttgac cgaggagcag gcgggtcgca
     6001 tagtcagtgc atacgcacct attgacctct ggctgcggct gcaacgcgcg ccggaggcgt
     6061 gtacgtcgcg cagcgggttt gcaatgattc aacgcatgag gcatcgcttc ggagctcgcg
     6121 tc
//
LOCUS       DATIML010000540         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4148576, whole genome shotgun sequence.
ACCESSION   DATIML010000540 DATIML010000000
VERSION     DATIML010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4148576"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..1639)
                     /locus_tag="VLJ38_09325"
     CDS             complement(170..1639)
                     /locus_tag="VLJ38_09325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39759.1"
                     /translation="MRPLLVMALVAAVGCGAQQGAGLAPSAPASAAGSAGATTVAAAK
                     AAAPRAACDYHVSAPPEPPYVVRVTARCEGGGVNGFASTEARAAPFVATQRATAPAAI
                     HAATASAPGVAELTYTVDLDRMASREDDIDVARRFGSSLVAPGSSFLLRPQPEVDDVP
                     ISVHFDAPGIESGLRRSGDAYTILSHELRVATFTTFGAREARDLSIAGANVRLVLLDG
                     PLDLTTDELARWVANAAQGVAAFFQRPPASRTLVVLGPLSGRHGIPFGKMLPATAPGV
                     IVLLGEHTGPRELTDDWVLVHELFHAGTPSFVGEGKWYDEGLATYFEPLIRARLGWRS
                     EADVWREFLTNMPRGLDAMTRRGLEHPERYPDMYWGGGLFCLLADVRARKLSRGVVGL
                     EDGLRAVLAAGGAASELWSLAHVTEVTDRALGAPILAELEASHSNAGFPVDLDELFAS
                     LGVSLDRKGELHFDNATPLVRLRHALVYGPPIAVASAPH"
     gene            complement(1642..>1851)
                     /locus_tag="VLJ38_09330"
     CDS             complement(1642..>1851)
                     /locus_tag="VLJ38_09330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/ABC1/UbiB kinase family protein"
                     /protein_id="HSU39760.1"
                     /translation="QVRGRLRAVMKSVEYPDGYFYVERTLILLFGLAGHLAPRVGLPG
                     LVLPYASRALAAGFREAAPPPSPSA"
BASE COUNT          296 a          646 c          672 g          237 t
ORIGIN      
        1 gctgatgcag caattttcgc tgccgccgtc acgcctcatc ggcgacatca agcgcgcgct
       61 cgaagccgcg atcgagagcg gcgagctcga gccgcacctc gagtcgggcg agtacgtcga
      121 gttcgtgcgc cagaatcgcg cgcgtttcgg gctctgacac gagctcgagc tagtgcggag
      181 ccgacgcgac ggcgatcggc ggaccgtaca ccaaagcgtg ccgaaggcgg acgagcggcg
      241 tcgcgttgtc gaagtgcagc tcgcctttgc gatcgagcga aactccgagg ctcgcgaaga
      301 gttcgtcgag gtcgaccgga aagcccgcgt tcgagtgcga agcttcgagc tcggcgagga
      361 tcggcgcccc gagcgcgcga tccgtcacct ccgtcacgtg cgcgagcgac cagagctccg
      421 aggcggcgcc gcccgccgcg agcacggcgc gcaagccgtc ttcgagcccg acgacgccgc
      481 gggagagctt gcgcgcccgc acgtcggcga gcaggcagaa gagcccgccg ccccaataca
      541 tgtcggggta gcgctcgggg tgctcgagtc cgcgccgcgt catcgcgtcg aggccgcgcg
      601 gcatgttcgt cagaaactca cgccagacgt ccgcttcgct gcgccagccg agtcgcgcgc
      661 gaatcagtgg ttcgaagtac gtggcgagcc cttcgtcgta ccacttgccc tcgccgacga
      721 acgagggcgt gcccgcgtga aacagctcgt gcacgagcac ccagtcgtcg gtgagctcac
      781 gcggccccgt gtgctcgccg aggagcacga tcacgccggg agcggtcgcg gggagcattt
      841 tgccgaaggg aatgccgtgt cggccggaca aagggccgag cacgacgagc gtgcgcgagg
      901 cgggcgggcg ctggaaaaag gcagcgacgc cttgcgcggc gttcgcgacc cagcgcgcga
      961 gctcgtcggt cgtgagatcg agcgggccgt cgaggagcac gaggcgtacg ttcgcgccgg
     1021 cgatcgagag gtcacgcgcc tcgcgcgcgc cgaaggtcgt gaacgtcgcc actctgagct
     1081 cgtgcgagag gatcgtgtac gcgtcgccgg agcgccggag ccccgactcg atacccggcg
     1141 catcgaagtg cacgctgatg ggcacgtcgt ccacttcggg ctggggacgt aagaggaagc
     1201 tcgagccggg cgcgacgagc gagctgccga agcgacgcgc tacgtcgatg tcgtcttcgc
     1261 ggctcgccat cctgtcgaga tccacggtgt acgtgagctc ggcgacgccc ggcgcactcg
     1321 cggtcgcggc gtggatcgcg gcgggcgccg tcgcacgctg cgtggccacg aacggcgccg
     1381 cgcgagcctc cgtcgaggca aatccgttca ccccgccgcc ctcgcagcgc gccgtcacgc
     1441 gcacgacgta gggcggttcg ggcggcgccg acacgtgata gtcgcacgcg gcgcgcggcg
     1501 ccgcggcttt ggccgctgcg acggtcgttg cgcccgcgct gccggccgcg ctcgcaggcg
     1561 cgctcggtgc gagccccgcg ccctgctgcg cgccacagcc aacggctgcg acgagcgcca
     1621 tgacgagcaa cggccgcacg gctaggccga cgggctcggc ggcggcgctg cttcgcgaaa
     1681 gccagccgcg agcgcgcgcg acgcgtacgg caagacgagc cccggcaagc ccacgcgcgg
     1741 cgcgaggtgc cccgcgagtc cgaacaagag aatgagcgtg cgctcgacgt aaaagtagcc
     1801 gtccgggtac tcgacgctct tcatcaccgc gcgcaagcgc ccccgcacct g
//
LOCUS       DATIML010000541         2954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5018472, whole genome shotgun sequence.
ACCESSION   DATIML010000541 DATIML010000000
VERSION     DATIML010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5018472"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VLJ38_09335"
     CDS             <1..413
                     /locus_tag="VLJ38_09335"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Mov34/MPN/PAD-1 family protein"
                     /protein_id="HSU39761.1"
                     /translation="EEACGYLEGPAGDALLVDRAVELENLANKYHAADPEGHPRTGRE
                     YFKINALKFERAIAEGQKTGRPVKVFFHSHLDCGAYFSAEDAASMTMGGSSGPTYALA
                     YLVTAVDQGKVTAHRLFIWDISAAKFVEAPFVRA"
     gene            487..1758
                     /locus_tag="VLJ38_09340"
     CDS             487..1758
                     /locus_tag="VLJ38_09340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39762.1"
                     /translation="MTLVRASAAFVIALWPALARADLGRDVEALTLAWRPFGHVERLE
                     PRLLERGDVLPLVLPADLLDPKSPSCLTLAVLGTSNMQFLLDPGRRAGDVPTEWPEGS
                     LAGALELTRCGPTKPSLASLALEMRSPRGVLEFVLVSSEHRPPAVTLVLPERDPGPVA
                     QIPSSGPRPIVAPLAVRLRAIEERSAREQALELTTLDLTAGPMGAGVALLTLGAGCHQ
                     FDLLGEESERRATDVDLEVTEVEHNQVLAADHGESSDGDALVCVPAATPVTVRFGGVA
                     PGAKLALVRARWDLDPSLPARFPADARARMSGILRAERRTLGAAPLIDEALGVQGDTL
                     ASVAVEPGACYLALAVALHGEVAALSIAAETAHKISQSRVDPDVPGAGVSFCAGAENR
                     VLFEVDARGLGLSWMSAIWRIGQTRLGEASE"
     gene            1755..>2954
                     /locus_tag="VLJ38_09345"
     CDS             1755..>2954
                     /locus_tag="VLJ38_09345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39763.1"
                     /translation="MKARRLGSLALSLIALACAKNAATPANPAARFGKVAGRPDTRAW
                     LKPTPGGDAEVIAVQGGVVGDRLTSLLEVPEGDCAVAIARATATVDDLDLFAYGEDGA
                     VLGSDESADKSPSLLICPPHPRRILLMARIAAGYGFVAIGAQRVSVSDAPRAAAVYGV
                     HYRPGEIAKRLTVWPGLDEAVEAHRRRIGGRWVDVRRVQVPLDARTPTRISAAIDAER
                     CLDALILPSDEVSALDAVLTGEDGKVLGRAQNSGRERSLVVCSPTPTNITLELRPRAG
                     VGVAVVLLSRSVEGTEPDIDAETLRLDVFAFGSVTDERKRRDAELAALGYSAPRVVAA
                     GNLPLGRRLSFPLELPDGCVRLEWVSGAPLRGVETWLYGADSGLLASDVGKSPRLFRC
                     GAAAAARL"
BASE COUNT          404 a         1067 c         1029 g          454 t
ORIGIN      
        1 acgaagaagc gtgcggctac ctcgaaggcc ccgccggcga cgcgctgctc gtcgatcgcg
       61 cggtcgagct cgaaaatctc gccaacaagt atcacgccgc cgatccggag ggccacccgc
      121 gcaccggccg cgagtatttc aagatcaacg cgctcaagtt cgagcgtgcc atcgccgaag
      181 gccaaaagac cggtcgtccc gtgaaagtct tcttccactc gcacctcgac tgcggggcgt
      241 atttcagtgc cgaggacgca gcgagtatga ccatgggcgg cagcagcggc ccgacctacg
      301 cgctcgcgta cctggtgacg gcggtggacc agggcaaagt caccgcacac cgcctcttca
      361 tttgggacat tagcgccgca aaattcgtgg aagcgccgtt cgtgcgagct tgagcatggc
      421 gcttccaata cgccacaggc tcggccctcg attctgaggt atacgggatc ggtgcggcgg
      481 ccgagcgtga cgcttgttcg agcgagcgcg gcgttcgtca tcgcactttg gccggcgctt
      541 gcgcgcgccg atctcggccg tgacgtcgag gcgctcacgc tcgcctggcg tcccttcggg
      601 cacgtcgaac gcctcgagcc gcgcctgctc gagcgcggag acgtgctgcc gctcgtcttg
      661 cctgcggacc tgctcgatcc caaaagtccc agctgcctga cgcttgccgt gctcgggacg
      721 agcaacatgc aattcctcct cgatccgggg cggcgcgccg gcgacgtgcc gaccgagtgg
      781 cccgaaggca gcctcgcggg agcgctcgag ctcacccgct gcggcccgac caagccgagt
      841 ctcgcctcgc tcgcgctcga gatgcgctcg ccgcgcggcg tgctcgagtt cgtgctcgtg
      901 agctcggagc atcgtccgcc cgcggtcacg ctcgtcttgc ccgagcgcga tcccgggccc
      961 gtcgcgcaga tcccgagctc ggggccgcgc ccgatcgtag cgccgctcgc cgtgcgcttg
     1021 cgtgcgatcg aggagcgctc ggcgcgcgag caggcgctcg agctcacgac actcgacctt
     1081 accgcggggc cgatgggcgc gggcgtcgcc ttgctgacgc tcggagccgg gtgccatcag
     1141 ttcgatttgc tgggggaaga aagcgaaagg cgcgcgacgg acgtcgatct cgaggtgacg
     1201 gaggtcgagc acaatcaggt gctcgccgcc gatcacggcg agagtagcga cggtgacgcg
     1261 ctcgtgtgcg tcccggccgc gacgcccgtc actgtgcgct tcggcggcgt cgcgcccggc
     1321 gcgaagctcg cgctcgtgcg cgcgcgttgg gatctcgatc cgtccctgcc cgcgcgtttt
     1381 ccggccgatg cgcgcgcccg gatgagcggc atcctgcgcg ccgaacgccg cacgctcggc
     1441 gcggcgccgc tcatcgacga agcgctcggc gttcagggcg acacgctcgc gtcggtcgcc
     1501 gtcgaaccgg gcgcctgcta cctcgcgctc gcggtcgccc tccacggcga agtcgcggcg
     1561 ctgtccatcg ccgccgagac tgcccacaag atttcccaga gccgcgtcga tcccgacgtg
     1621 cccggcgccg gcgtgagctt ctgtgcaggc gccgagaacc gcgtgctgtt cgaggtcgac
     1681 gcgcgcggac tcggcctcag ctggatgtcg gcgatttggc gcatcggtca aactcggctc
     1741 ggcgaggcga gcgagtgaag gcgcgtcgcc tcggctcgct cgcgctctct ctcatcgcgc
     1801 tcgcctgcgc gaaaaacgcg gcgacgccgg cgaaccctgc ggcgcggttc ggcaaagtcg
     1861 cgggccgccc cgacacgcgc gcctggctca agccgacgcc gggcggcgac gccgaggtca
     1921 tcgccgtgca gggcggcgtc gtcggtgacc gcctgacgag cctgctcgaa gtgcccgagg
     1981 gcgactgcgc cgtcgcgatc gcgcgcgcca cggcgacggt cgacgacctc gatctcttcg
     2041 cctacggcga ggacggcgcc gtgctcggct ccgacgaaag cgccgacaag tcaccgtcgc
     2101 tcttgatttg cccgccgcac ccgcggcgta tccttttgat ggcgcgcatc gcggcaggct
     2161 acggcttcgt cgccatcggc gcgcaacgcg tgagcgtctc tgacgcgccg cgtgccgccg
     2221 ccgtctacgg cgtgcactat cgcccgggcg agatcgccaa gcgcctcacg gtgtggcccg
     2281 gtctcgacga ggcggtcgaa gcgcaccggc gccggatcgg cggccgctgg gtcgacgtcc
     2341 ggcgcgtgca agtaccgctc gacgcgcgca cgccgacgcg gatttcggcg gcgatcgacg
     2401 cggagcgctg cctcgacgcc ttgattttgc cctcggacga agtgagcgcc ctcgacgccg
     2461 tgctcacggg cgaagacggc aaggtgctcg ggcgcgcgca aaactcgggc cgcgagcgct
     2521 ctctcgtcgt gtgctcgccg acgccgacga acatcacgct cgagctccgg ccgcgcgccg
     2581 gtgtcggcgt ggcggtggtc ttactctcgc gctcggtgga aggcacggag ccggacatcg
     2641 acgccgagac gctccggctc gacgtcttcg cgttcggctc cgtcacggac gagcgcaaac
     2701 gtcgcgacgc cgagctcgcg gcgctcggtt attcggcgcc gcgcgtcgtc gcggccggca
     2761 acctgccgct cggacggcgc ctgagcttcc cgctcgagct ccccgacggc tgcgtgcgac
     2821 tggaatgggt gagcggcgcc ccacttcgcg gcgtcgaaac ctggctgtac ggcgccgaca
     2881 gcggcttgct cgcgagcgac gtcggcaaga gcccgcgcct gtttcgctgc ggtgcggcgg
     2941 ccgctgcgcg gctc
//
LOCUS       DATIML010000542         3100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2705515, whole genome shotgun sequence.
ACCESSION   DATIML010000542 DATIML010000000
VERSION     DATIML010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2705515"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VLJ38_09350"
     CDS             <1..200
                     /locus_tag="VLJ38_09350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39764.1"
                     /translation="QRLGVALVRFVLEHPELSLVFKWTLATADAHAVYEHAGFHALTA
                     PERWMSFERPRAWLPEDAPNA"
     gene            306..2534
                     /locus_tag="VLJ38_09355"
     CDS             306..2534
                     /locus_tag="VLJ38_09355"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: protein motif:HMM:NF013665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HSU39765.1"
                     /translation="MGRPGKIEVVSTKPVASQLDLSLAYTPGVAAPCREIARDPETVN
                     LYTARQNLVAVVSNGTAVLGLGNLGPRAAKPVMEGKAVLFKRFADIDVFDIEVDETDP
                     MRFVEVVRALEPTFGGINLEDIRAPDCFVIERELRERMSIPVFHDDQHGTAIISAAAL
                     RNAAELQEKSLHELKVCCLGAGAAATSCMQMWVRLGVRRENITMVDVNGVLVEGRPDL
                     DEFRASFARPKSDPRRTLAEAVVGADVLLGLSAGGIVTPAMLKTMAAKPIIFALANPD
                     PEIAYPDAVAARPDAIVATGRSDFPNQVNNVLGFPFVFRGALDVHARSVSEEMKVAAA
                     EALAELAREEVTDEVLRAYGRQRMRFGRDYVIPKPFDNRVLYWVAPAVAKAAMDSGVA
                     RRTVDITEYKARLYHTISPTRRVLWNITESVKAKKKRVVFPEGDSDSILRAAHAVLEA
                     GIAEPVLIGARERILEHAERLGFELSHATIINPRECDELERYVESYWHKRQRRGVTRL
                     AAQKELRSSRTAFGMIMVAEGDADGLVAGVRQPYPATIRPALQIVGMREGVRRAAGMY
                     MVVTKQGVRFLADTTINIDPNADELAEIALLATDAVTELGLEPRVAMLSFSNFGDAPH
                     PQSRKVAEATAKVQKLRPDLMIDGEMQANVALDEEARAVYPFSKLRGAANVLIFPNLD
                     AGNAAYKLLAVTGNADVIGPMVLGLRRPVNVLQQGASVDSIVHMTAITASQAIRLETA
                     RS"
     gene            complement(2564..>3100)
                     /locus_tag="VLJ38_09360"
     CDS             complement(2564..>3100)
                     /locus_tag="VLJ38_09360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39766.1"
                     /translation="EGGDSVGPGGGAGAPDAVPAAGVSLRLAPGSVSGVDCDAGTTGA
                     FSYVIGSPPVRVVASGYADVVAACTLRQDAGGALHIDGSVAGTDANSRLPISVTITSD
                     VAADGSTVATLDFRSPDTGELSTLAQFPGCTLGYVERPASGAVVAYIDCPIIASPTDP
                     TIGCNVHGSFAFVNCNTE"
BASE COUNT          532 a         1103 c         1001 g          464 t
ORIGIN      
        1 gacagcgact cggcgtcgcg ctcgtccgtt tcgtgctcga acatcccgag ctgtcactcg
       61 ttttcaagtg gacgctcgcg acggctgacg ctcatgccgt ctacgagcac gccggtttcc
      121 acgcgctcac ggcgcccgaa cgctggatgt ccttcgaacg gccgcgcgcc tggttgcccg
      181 aagacgctcc aaacgcgtga gcgttgtcgg ttccatcgcg gggccgtcgt actagactgc
      241 ggccgccgcg ctcttcgcgc ggaccgaccg acatgaaaga cgacgacgcg cttcgatacc
      301 attcgatggg ccgccccgga aaaatcgagg tggtctcgac caagccggtc gcgtcacaac
      361 tcgatttgtc actcgcctac acgcccggcg tggcggcccc gtgccgcgag atcgcgcgtg
      421 atccggagac ggtgaacctc tacacggctc ggcaaaacct ggtcgccgtc gtttcgaacg
      481 gcacggcggt gctcgggctc ggtaatctcg gcccacgcgc ggccaagccc gtgatggagg
      541 gcaaggcggt cctgttcaag cgcttcgccg acatcgacgt gttcgacatc gaggtcgacg
      601 aaaccgatcc gatgcgcttc gtcgaagtcg tgcgcgcgct cgagccgacc ttcggcggca
      661 tcaacctcga ggacatccgc gcccccgact gtttcgtgat cgagcgcgag ctgcgcgagc
      721 gcatgtcgat cccggtgttc cacgacgacc agcacggcac ggcgatcatc tccgcggcgg
      781 cgctgcgtaa cgcggccgag ctccaggaaa aatcgctcca cgagctcaag gtgtgctgcc
      841 tcggggcggg cgcggcggcg acgagctgca tgcaaatgtg ggtgcggctc ggcgtccggc
      901 gcgagaacat cacgatggtc gacgtgaacg gcgtgctcgt cgaaggacgg cccgatctcg
      961 acgaatttcg cgcgagtttc gcgcggccga agagcgatcc gcgccgcacg ctcgccgaag
     1021 cggtcgtcgg cgccgacgtg ctgctcggct tgtcggcggg cggcatcgtc acgcccgcga
     1081 tgttgaagac gatggcggcg aaacccatca ttttcgcact cgccaatccc gatccggaga
     1141 tcgcttaccc agacgcagtc gccgcccggc ccgacgccat cgtcgccacg gggcgcagcg
     1201 atttcccgaa ccaagtgaac aacgtgctcg gttttccctt cgtgttccgc ggcgcgctcg
     1261 acgtgcacgc gcgctcggtg agcgaggaga tgaaggtcgc tgcggccgaa gcgctcgccg
     1321 agctcgcgcg cgaggaagtc acggacgagg tgctgcgcgc ctacggccgg cagcgcatgc
     1381 gcttcggccg cgactacgtg atcccgaagc cgttcgacaa ccgcgtgctc tactgggtcg
     1441 cgcccgcggt cgccaaagcc gccatggact ccggcgtcgc gcgccgcacg gtcgacatca
     1501 cggagtacaa ggcgcggctt tatcacacga tctcgccgac gcgccgcgtg ctctggaaca
     1561 tcaccgagag cgtgaaggcc aagaagaagc gcgtcgtctt ccccgagggc gacagcgact
     1621 ccatcctgcg cgccgcgcac gccgtgctcg aagccggcat cgccgagccc gtcttgatcg
     1681 gcgcgcgcga gcgcatcctc gagcacgccg aacgcctcgg tttcgagctc agccacgcga
     1741 ccatcatcaa cccgcgcgaa tgcgacgagc tcgagcgcta cgtcgaaagc tactggcaca
     1801 agcgccagcg ccgcggcgtc acgcggctcg ccgcccagaa ggagctccgg agctcgcgca
     1861 cggcgttcgg catgatcatg gtcgccgagg gcgacgccga cggcctcgtc gcgggcgtac
     1921 gccagccgta cccggcgacg atccgcccgg cgctccagat cgtcgggatg cgcgaaggcg
     1981 tgcgtcgcgc ggccggcatg tacatggtcg tcacgaaaca aggcgtgcgc ttcctcgccg
     2041 acacgaccat caacatcgac ccgaacgccg acgagctcgc cgagatcgcg ctgctcgcga
     2101 ccgacgccgt caccgagctc ggcctcgaac cgcgcgtcgc gatgctctcc ttctcgaact
     2161 tcggcgacgc gccgcatccg cagtccagaa aagtcgccga agccacggcc aaggtgcaaa
     2221 agctgcgccc cgacctcatg atcgacggcg aaatgcaggc aaacgtcgcg ctcgacgaag
     2281 aagcgcgcgc cgtctacccc ttctcgaagc tacgcggcgc ggccaacgtc ctcatcttcc
     2341 cgaacctcga cgccggcaac gccgcctaca aactgctcgc cgtcacgggc aacgccgatg
     2401 tcatcgggcc gatggtgctc ggcttgcgcc gccccgtgaa cgtcctgcaa caaggcgcaa
     2461 gcgtggactc gatcgtgcac atgaccgcga tcacggcgtc gcaggcgatt cgcctcgaga
     2521 ccgcgcgctc gtaagggcga acgcgcgcgc aagcagcgcc gagctactcg gtgttgcagt
     2581 tgacgaacgc gaagctgccg tggacgttgc agccgatcgt ggggtccgtg gggctggcga
     2641 tgatcggaca gtcgatgtac gccacgacgg cgccgctcgc cgggcgctcg acgtagccga
     2701 gcgtgcaccc cgggaactgc gcgagcgtcg atagctcgcc cgtatcgggc gaccggaaat
     2761 cgagggttgc taccgtcgag ccgtccgcag cgacgtcgct cgtgattgtc accgagatgg
     2821 ggagacgact gttcgcatcg gtccccgcga cgctaccgtc gatgtgcagg gcaccgccag
     2881 cgtcttgtcg cagcgtacag gctgcaacga cgtccgcgta gccgcttgcc accacgcgca
     2941 caggcggact gccaatgacg tagctgaaag cgccggtcgt cccggcgtcg caatcaacgc
     3001 ccgacacgct gcccggcgcg agcctcagcg aaacgcccgc ggcgggcact gcatctggcg
     3061 ccccggctcc tccgcccgga ccgaccgagt cacctccctc
//
LOCUS       DATIML010000543         2864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_974493, whole genome shotgun sequence.
ACCESSION   DATIML010000543 DATIML010000000
VERSION     DATIML010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974493"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..911
                     /locus_tag="VLJ38_09365"
     CDS             141..911
                     /locus_tag="VLJ38_09365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39767.1"
                     /translation="MNYFITAIPLTLGLMLGMLFLLEFGRRLARRTLAASGGSAQTST
                     LDSAVFGLLGLMLAFTFSGAATRFDARRAQIVEETNDLGTAWLRLDLLPGNAQPALRD
                     LFRRYVDSRLEIYGHLQDVEATHAELRRTNELQAEIWTGAVTACGEKKDPATTTLVLA
                     SLNAVFDITTTRAAAGRMHPPAVVFVLLFALALASAFVAGHGMASASGAPWLHMLTFA
                     AMIATSVYLVLDIEYPRAGFVRIDGFDETLAQLRRSMD"
     gene            complement(964..1782)
                     /locus_tag="VLJ38_09370"
     CDS             complement(964..1782)
                     /locus_tag="VLJ38_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HSU39768.1"
                     /translation="MQQLTPEGQHVVSGLASKHGFSTDAVTHMLFAVLNGNGSMAQFS
                     HGEFGGSGQWMKGGMLMLGDMFNNYLKGRVDGLCWDISNILATQPGLLRSGSFQSQSQ
                     GGTSYQQQANGTPTGSSSLFVPDPESNWWPSELGSPSATGAQNHVRYAYFANGRRLAV
                     KTGSEVWVYDTLDHQIGGFSQQQGAGGSITFGSQYGTVNLSTLPIVSRNGQPVAPQSA
                     SLGPAWTPNPESVMSNRGSEDVIASLEKLGDLKAKGILTEAEFTAKKAELLARL"
     gene            2326..>2864
                     /locus_tag="VLJ38_09375"
     CDS             2326..>2864
                     /locus_tag="VLJ38_09375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39769.1"
                     /translation="MSAAGRTNTAGGMNRAGRASGGTGNGGSAGSGAAGKSGSAGHGA
                     SSDVCAAPVASLANRPQLSDSEAAKYTLATYFAKAGAFNALTTDNWDPTPGLGDASTF
                     TPDYTVAADTSGTHTTVQAALNAVSGSARRYILVKPGTYRGQVSYTGSTPVTLYGADA
                     DATKVTVINDKSQQDGTSET"
BASE COUNT          475 a          921 c          988 g          480 t
ORIGIN      
        1 tcgaagcaga acgacaaagc tgccgttccc gacagcacga agcggctcat ttcacgggca
       61 tgaaggttgc tcctcgcgaa agcaatgaag ctgcctggct gggatcgcgc cgtgggccgg
      121 gtgcgcgtgg gcgtcggcgc atgaactact tcatcactgc aattccgctc acgctcgggc
      181 tgatgctcgg gatgttgttc ttgctcgagt tcgggcggcg gctcgcgcgg cgtactctgg
      241 cggcgagcgg cggcagcgcg caaacgagca cgctcgacag cgctgtgttt gggctgctgg
      301 ggctcatgct cgcgttcacg ttctcggggg cggcgacgcg tttcgacgcg cgtcgcgcgc
      361 aaatcgtcga ggagaccaat gatctcggca cggcgtggct ccggctcgac ctgctgccgg
      421 gcaacgcaca gccggcgcta cgggacctct ttcggcgcta cgtcgactca cgtctcgaga
      481 tctacggtca tttgcaggac gtggaagcca cgcacgccga gctccggcgc acgaacgagc
      541 tccaagccga gatttggacc ggcgccgtca cggcctgcgg cgaaaagaag gaccccgcca
      601 cgacgacgct cgtgctcgct tcactcaatg ccgtcttcga catcacgacg acgcgcgcag
      661 ccgccggtcg catgcacccg ccggccgtcg ttttcgtgct gctgttcgcg cttgctctcg
      721 cgagcgcgtt cgtcgcgggg cacggcatgg cttccgcgtc gggcgccccg tggcttcaca
      781 tgctgacctt cgcggcgatg atcgcgacga gcgtgtatct cgtgctggac atcgagtacc
      841 cgcgcgccgg cttcgtgcgc atcgacggct tcgacgagac gctcgcccag ctccgccgca
      901 gcatggattg agcgctcgaa gcggccgaag cgcgccgccg tgacgtttcc gcctcggcga
      961 tcgttagagt cgggcgagca actcggcctt cttcgcggtg aactcagcct cggtgagaat
     1021 gcctttggct ttgagatcgc caagcttttc gagcgaggcg atgacgtctt cactgccgcg
     1081 attggacatg acggattcgg ggttgggcgt ccaggctggc cccagcgaag ccgactgtgg
     1141 tgcgacgggt tgaccattgc gcgagacgat cggcagcgtc gacagattga cggttccgta
     1201 ctggctgccg aacgtgatcg agccccccgc tccctgctgc tgcgaaaagc caccgatctg
     1261 gtgatcgaga gtgtcgtaga cccaaacttc gctgcccgtt ttgacggcga gccggcggcc
     1321 gttggcgaag taggcgtagc gcacgtgatt ttgagccccc gtagcgctcg gcgagccaag
     1381 ctcgctcggc caccagttgc tctcgggatc cggcacgaac agactcgaag atccggtagg
     1441 cgtcccgttc gcctgctgct ggtagctcgt gccgccctgg ctctgcgact gaaagctacc
     1501 cgagcgcaag agtcccggct gggtggcgag gatgttcgaa atgtcccagc agagcccgtc
     1561 gactcggccc ttgaggtagt tgttgaacat gtcgccgagc atcaacatgc cgcccttcat
     1621 ccattggcca gaaccgccaa attcaccgtg actgaattgg gccatcgaac cgttgccgtt
     1681 cagcacggca aagagcatgt gggtgactgc gtcggtgcta aacccatgtt tgctcgccag
     1741 cccgctgacg acgtgctgac cttcgggcgt gagctgttgc atgcggccgt cctaccatga
     1801 cggtctggcg ccgtccggag gcccgctcgc tggcagctgc gagatcgacg ctcacatgtt
     1861 tcgggccgtt tcgggtgttg gttcgttccg caaagtgagg gcgtggccgc gcggtgactg
     1921 ggcccgggcc gctcgggcaa ctaggaggtc ctaggtttcc ttcacatgcg agtcgtcagc
     1981 atcggttttt tgatgttcct ggtcggactt ccgctcggcg cttgtgcgag caacgccgaa
     2041 gcgccgtatc cgggcgcggc aggcagcggg tcggcgggcg ggacgcccaa tggcggaggg
     2101 ggtcgaccag cagggggcag cccagccact gctgacggcg ctggcggtac cggggctgcg
     2161 ggtaacgggg cgggcgcgtc gctcggcggc agcagctcgg gaggccgtgg agacaacggc
     2221 ggaggcggcg tcgcggcaag cacgaccggc ggcgctagtc ccgcaaacgc cggcagaggg
     2281 agcggtggtg ccgactcagg acgtgggtcg gtcggctcag gcggcgtgag cgccgcgggc
     2341 cgaacgaaca ccgccggcgg catgaaccgc gcaggacgcg cgtcaggcgg cacggggaac
     2401 ggcggctcgg cagggagcgg tgcagccggc aagagcggct cggcaggcca cggcgcgagc
     2461 agcgacgtct gcgcagcacc ggtcgcgagc ctcgcgaacc gaccgcaact atcggattcc
     2521 gaagcggcga agtacacgct agcgacctat ttcgcgaagg cgggagcgtt caacgcgctc
     2581 acgactgaca actgggatcc gacgccgggc ctcggggacg cgagcacgtt cacgcccgac
     2641 tacaccgtgg ccgcggacac cagcggcaca cacacgaccg tgcaggcggc gctcaacgcc
     2701 gtgtcaggct cggcgcgccg ctacattctc gtgaagcccg gcacgtaccg cgggcaggtt
     2761 tcgtacacgg gctcgacgcc cgtcacgctc tacggcgctg acgccgatgc gacgaaggta
     2821 accgtcatca acgacaaatc gcagcaggac ggcacgagcg aaac
//
LOCUS       DATIML010000544         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2706336, whole genome shotgun sequence.
ACCESSION   DATIML010000544 DATIML010000000
VERSION     DATIML010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2706336"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..391)
                     /locus_tag="VLJ38_09380"
     CDS             complement(<1..391)
                     /locus_tag="VLJ38_09380"
                     /inference="COORDINATES: protein motif:HMM:NF014165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39770.1"
                     /translation="MSYAALERHQKRLSHLEHLEAITAWDEATMMSEGGGEARAEALA
                     TLRGIIHDESVKPAVGEWVARAEASSGELDAWQAANLREIKRSWVRATAIPSALVEAS
                     SRAESKSEQAWRKLRSDNDWASFAPLLG"
     gene            complement(471..>1579)
                     /locus_tag="VLJ38_09385"
     CDS             complement(471..>1579)
                     /locus_tag="VLJ38_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU39771.1"
                     /translation="EAKRKDLAKVQEKVSYLKEEVTDQDIAAVVAKWTGIPVSKMLEG
                     EMQKLLHMEEGLHKRVVGQDEAVRAVSNAVRRSRAGLGDERRPIGSFLFLGPTGVGKT
                     ELARAVAEFLFDDEKAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEPVRRRP
                     YSVILFDEIEKAHPDVFNALLQVLDDGRLTDGQGRTVDFRNTIIILTSNIGTSELTAL
                     EERRDLTAEEKERTGERVVADALRQYFRPEFINRLDEIVIYDRLGRDQIRSIVDIQLG
                     AVAERLKRRDLSLDVSEAAKELLAELGWDPQYGARPLKRAIQKHLEDGLARRLLSGEF
                     SPGDTVFVGRAGSELTFVKASGNPEERRAASALN"
BASE COUNT          234 a          548 c          497 g          300 t
ORIGIN      
        1 cgccgagcag cggcgcgaac gacgcccaat cgttgtcgga gcggagcttg cgccaggctt
       61 gctcgctctt cgattccgcg cgcgacgaag cctcgacgag cgcgctcgga atcgccgtgg
      121 cgcgcaccca cgagcgcttg atctcgcgca agttcgcggc ttgccacgcg tcgagctcac
      181 ccgaactcgc ctccgcgcgc gcgacccatt cgccgaccgc gggcttgacg gactcgtcgt
      241 ggatgatgcc acggagcgtg gcgagcgctt cagcgcgtgc ctcgccgccg ccctcggaca
      301 tcatggtggc ctcgtcccag gcggtgatcg cttccagatg ttcgaggtgc gagagcctct
      361 tttgatggcg ttcgagagcg gcgtacgaca tcgtgctcgt gctcctacca cgccgactcg
      421 aagcgcgcgg ggccgaaccc tcgcgggccc cgcgccgctg cgcgagtcag tcagttgagc
      481 gccgaagccg cccgtcgctc ctccgggttt ccgctcgcct tgacgaaggt gagctcggac
      541 ccggcgcggc cgacgaagac cgtgtcaccc ggtgaaaatt cgccgctcag caggcgccga
      601 gcgaggccgt cctcgaggtg cttttggatc gcgcgcttga ggggtcgcgc gccgtactgg
      661 gggtcccagc cgagctcggc gagcagctct ttcgccgctt cgctcacatc caggctcaaa
      721 tcgcggcgct tcaggcgctc ggcgacggcg ccgagctgga tatcgacgat gctgcggatc
      781 tggtcgcgcc ccaggcggtc gtagatgacg atctcgtcca ggcggttgat gaactccggc
      841 cggaagtatt gccggagcgc gtcggcgacc acgcgctcac cggtgcgctc tttctcctcg
      901 gccgtcagat ctcggcgctc ctcgagcgcg gtcagctccg aggtgccgat gttgctcgtg
      961 agaatgatga tggtgttgcg aaaatcgacg gtgcggccct ggccgtccgt cagccgtccg
     1021 tcgtcgagca cctgcaagag cgcgttgaac acgtcggggt gcgccttctc gatctcgtcg
     1081 aacaagatca cgctgtacgg gcggcgcctc accggctccg tcaactgacc gccttcgtcg
     1141 tagcccacgt agccgggggg cgcgccgatc agccgcgaaa ccgcgtgttt ttccatgtat
     1201 tcgctcatat cgatgcgaat catggccttc tcgtcgtcga acaagaattc ggccaccgcg
     1261 cgtgcgagct cggtcttgcc cacgccggtg gggcccaaga acaagaacga cccgatcggg
     1321 cgacgctcgt ctccgaggcc ggcacgcgac cgtcgcacgg cgttggacac cgcgcgcacc
     1381 gcttcgtcct gccccacgac ccgcttgtgc agaccttctt ccatatggag aagcttctgc
     1441 atttcccctt cgagcatttt gctcaccggg atgcccgtcc acttggcaac cactgcggcg
     1501 atgtcttggt cggtcacctc ttccttcaaa tagctgacct tctcttgcac cttggccaag
     1561 tctttgcgct tggcctcga
//
LOCUS       DATIML010000545         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_974564, whole genome shotgun sequence.
ACCESSION   DATIML010000545 DATIML010000000
VERSION     DATIML010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974564"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VLJ38_09390"
     CDS             complement(<1..833)
                     /locus_tag="VLJ38_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU39772.1"
                     /translation="MPLIEVAGLKFGYSNQPLFENVTFRLEAGERAALVAPNGAGKST
                     LLRALTGELTPDAGSVVIKKGASVGYYRQSHESRLEGSVRDSMLAGFGDLVSIRRELS
                     RAQADAASGERAALEHLAELTERYHHAGADALEHRVEAIATDLGFREADLERDVKTLS
                     GGERGRLELGLVLATDAELLLLDEPTNHLDLDTIRWLESYLTGLHAAVLVVSHDRAFL
                     DAACPFTFELGQRTFRTYPLPYSAYHEERAADLERERKLAEEQAAMVAKTEDFIRKNI
                     AG"
     gene            complement(936..1670)
                     /locus_tag="VLJ38_09395"
     CDS             complement(936..1670)
                     /locus_tag="VLJ38_09395"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSU39773.1"
                     /translation="MTLPVPVVPPLVPPVVPPPVGRRYLQAPVPIHFPVSEELPETAR
                     HWKARTVLAESIQHAFGEHALVSCDQFLYWDANDPKRMLAPDVAFRVGAPSDVLDCWK
                     TWERGAPHVGVEIISGSDASEMRFEEKLARYRPAGVREMVRYDWDERERPIRIWDRVE
                     GDLVERELAEAETFRCDVLGWYWCEKEDPELGLTLRLARNPDATEFVLTPLEAERAAT
                     AAALAAKDAALERIAELEAELAGRRT"
     gene            1775..>2192
                     /locus_tag="VLJ38_09400"
     CDS             1775..>2192
                     /locus_tag="VLJ38_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39774.1"
                     /translation="MLRTNLSFRFLGWTVAAAVACSATGKGTGALPGADAGGTGTSAT
                     GGTGAGGGSGGGINPGGGTINVDPTGGTTSGPDPDARMPACDNGCADLAAPGPVLDDG
                     VPASAPSMFSGNASGAGPCIMEPGDNTLLPYNWLRPR"
BASE COUNT          334 a          731 c          757 g          370 t
ORIGIN      
        1 ccggcgatgt tcttgcgaat gaagtcttcg gtcttcgcga ccatcgcggc ttgctcttcg
       61 gcgagcttcc gctcccgctc gaggtcggcg gcgcgctctt cgtgatacgc gctgtacggc
      121 agcgggtacg tgcgaaacgt ccgctgtccg agctcgaacg tgaaggggca cgccgcgtcg
      181 aggaacgcgc gatcgtgcga cacgacgagg acggcggcgt gcagccccgt gagatagctc
      241 tcgagccagc ggatcgtatc gagatcgagg tggttggtcg gctcgtcgag caggagcagc
      301 tcggcgtccg tcgcgagcac gaggccgagc tcgagccgac cgcgctcgcc gcccgagagc
      361 gtcttcacgt cgcgctcgag gtccgcttcg cgaaagccga gatcggtcgc gatcgcttcc
      421 acgcggtgct cgagcgcgtc ggcgccggcg tggtggtagc gctcggtgag ctcggccaag
      481 tgctcgagcg cggcacgttc gccgctcgcg gcgtcggctt gagcgcggct gagctcgcgc
      541 cggatgctga cgagatcgcc gaaaccggcg agcatggagt cgcgcacgct gccttcgagc
      601 cggctctcgt ggctctgccg gtaatagccg acgctcgctc cctttttgat gacgacggaa
      661 ccggcgtcgg gagtgagctc tccggtgagc gcgcggagca gcgtgctctt gccggcgccg
      721 ttcggagcga ccagcgcggc gcgctcgccg gcttcgagcc tgaaggtgac gttctcgaac
      781 aggggctggt tcgagtagcc gaacttcaag cctgcgactt caatcagggg cacttgaggg
      841 acctacgctc ggctcggggg tcgggagagc cggcggcggt ttagcaccga gcgtcgagcg
      901 ccgcgatctt ccctcgaaaa ccaccaaagt cgaggctacg tgcgtctgcc cgcaagctcg
      961 gcttcgagct cggcgatgcg ctcgagcgcg gcgtccttcg cggcgagcgc ggcagccgtg
     1021 gcagcgcgtt ctgcctcgag cggcgtgagc acgaactccg tcgcgtcagg gttccgcgcg
     1081 aggcgcaacg tgagtccgag ctccggatcc tccttttcgc accagtacca gccgagcacg
     1141 tcgcagcgga acgtctccgc ttccgcgagc tcacgctcga ccaaatctcc ctcgacccga
     1201 tcccagattc gaatcggccg ttcgcgctcg tcccagtcgt agcgcaccat ttcccgcaca
     1261 cctgcagggc gataacgagc gagtttctct tcgaaacgca tctcggacgc atccgagccg
     1321 ctgatgatct cgacgccgac gtgcggcgcc ccgcgttccc aagtcttcca acagtcgagc
     1381 acgtcgctcg gcgcgccgac acggaacgcg acgtccggcg cgagcatgcg cttcgggtcg
     1441 ttcgcgtccc aatacaagaa ttgatcacaa ctcacgagcg cgtgctcgcc gaacgcgtgt
     1501 tgaatgctct ccgcgagtac ggtgcgcgcc ttccagtgcc gagcggtctc cggcagctct
     1561 tcactcacgg ggaagtgaat cggaaccggc gcttgcaggt agcgtctgcc gacggggggc
     1621 gggaccacgg gcggaaccag gggcgggacc acgggaacgg gcaaagtcat tgaagtttac
     1681 cactccttcc gaagtcggat gcccgccgac cgagttgcgt gcgtgcggct ggattgctgg
     1741 cgcgccccga tgggctaccc tctcactctc gatcatgctt cgcacgaact tgagcttcag
     1801 gtttctcggt tggacggtgg cggccgccgt cgcttgctcc gcgacgggga agggcaccgg
     1861 tgctctgcct ggtgctgacg caggtggaac cggtaccagt gcgaccggcg gcacgggtgc
     1921 gggtggcggc tccggtggcg gcatcaaccc gggcggtggc acgatcaacg tggatccgac
     1981 gggcggcacc acgtcgggac cggatcccga tgcgcgcatg ccggcctgtg acaacgggtg
     2041 cgcggatctg gcggcgcccg gtcccgtgct cgacgacggc gtgcccgcga gcgcgccgag
     2101 catgttctcg ggcaacgctt ccggtgcggg cccctgcatc atggagccag gggacaacac
     2161 gctcttgccc tacaactggc tccggccgcg cg
//
LOCUS       DATIML010000546         2637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2128277, whole genome shotgun sequence.
ACCESSION   DATIML010000546 DATIML010000000
VERSION     DATIML010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2128277"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="VLJ38_09405"
     CDS             <1..222
                     /locus_tag="VLJ38_09405"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSU39775.1"
                     /translation="PPDAKYYEHWFCSRCGSTMPRFDSGRGFAIIPLGAFDEDPGTRP
                     CRHIHVASKAAWDIISDDLPQFEAGPPTL"
     gene            complement(260..1168)
                     /locus_tag="VLJ38_09410"
     CDS             complement(260..1168)
                     /locus_tag="VLJ38_09410"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSU39776.1"
                     /translation="MEIITNVNLAAFDLNLLLVLHTVLAEGSVARAARRLAVTSSAVS
                     NALARLRVALDDPLTVRSGRGIVPTPRAAALAPVLARTLAALGEAVSGTDLDPAHTER
                     EFTLAIADVGQVVQLPGIVARLATAMPRARLRVVSIDTLHAAGGLASTAVDVSIGAGE
                     RGPGVRATALYEERIVLVARREHPLARARVTKRVLEALRHVEVHVSPGKGNRALAASY
                     AAAGLTRDLAVSVPTFTAAAAIVSTTDLVAWLPASLVEVLAPRLGLRVVATPLRPVRT
                     AINLLWHERTDHDPTLRAFRELIERA"
     gene            1216..1689
                     /locus_tag="VLJ38_09415"
     CDS             1216..1689
                     /locus_tag="VLJ38_09415"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HSU39777.1"
                     /translation="MSNPNHDLNKRAVRSLFEDGFNHQRGDVLAAVVAPEYVDAFGEH
                     GAAAFEKVIAGLRGGFPDIEYTVEELVAEDDAVAARWHWTGTHRGVFRGLAPTERRVT
                     NNGLAIFHLRAGKVVAATLETDRLGFLQGIGVVPPNEALFGARVPPKPDPSPLSA"
     gene            complement(1737..2369)
                     /locus_tag="VLJ38_09420"
     CDS             complement(1737..2369)
                     /locus_tag="VLJ38_09420"
                     /inference="COORDINATES: protein motif:HMM:NF017538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqiA/YcfP family alpha/beta fold hydrolase"
                     /protein_id="HSU39778.1"
                     /translation="MRFIYLHGFASSPRSTKAVFFSERLRCLGHAVDVPDLEEGDFEG
                     LTITRQLAVVRRAIARAPGELALIGSSMGGYLALLAAAEEARVQRLMLMAPAIDMRAQ
                     WAVRYGAEKLAYWKSAGAAPIFHHAYGEERLIGYGLYDDLERYDPAPPARTPTLAFMG
                     RHDTTVAPAAVESWASQNPNVRAVWLDSGHELVDQLETMWSETAAFFGLA"
BASE COUNT          435 a          886 c          908 g          408 t
ORIGIN      
        1 ccaccggacg ccaagtatta cgagcactgg ttctgcagca gatgcggctc gacgatgccg
       61 cgcttcgaca gcggccgcgg gttcgcgatc atcccgctgg gagccttcga cgaagaccca
      121 ggcacgcgcc cctgccggca cattcatgtc gcatcgaaag ccgcctggga catcatctcc
      181 gacgatctgc cgcagttcga ggcaggcccg cccacgctct gaaagtcttg gtcccacgct
      241 tccaggacgc gtcctctcct cacgcgcgtt cgatgagctc gcggaaagca cgcagcgtcg
      301 ggtcgtggtc ggtacgctcg tgccagagca agttgatcgc cgtcctcacg gggcggaggg
      361 gcgtggcgac gacccgcagg ccgagacgtg gggcgagcac ttccacgagc gaagccggta
      421 gccaggctac caaatcggtt gtggaaacga tggccgccgc agccgtgaag gtcggaacgc
      481 tcacggcaag gtcgcgtgtg aggccggccg ccgcgtagct cgccgccagc gcgcggttac
      541 ctttgccggg cgacacgtgg acctcgacgt gacgcagggc ttcgagcacg cgcttcgtca
      601 cgcgcgcgcg ggcgagcggg tgctcgcggc gtgcgacgag cacgatgcgt tcctcgtaca
      661 gcgctgtggc ccgcacgccg gggccgcgtt cccccgcgcc gatcgatacg tctacggccg
      721 tactcgcgag cccgccggcg gcgtgcagcg tgtcgatgct gacgacgcgc agccgcgcac
      781 gcggcatcgc cgtagcgagc cgcgccacga tgcctggcaa ttggacgacc tggcccacgt
      841 cggcgatggc gagcgtgaat tcgcgctcgg tgtgagccgg atcgaggtcc gtgccggaca
      901 ccgcctcgcc gagcgccgcc aacgtgcggg cgagcacggg cgcgagcgcc gcagcgcgcg
      961 gcgtgggcac gatgccgcgg ccgctccgca cggtgagcgg atcatcgagc gcgacgcgca
     1021 ggcgcgcgag cgcgttgctg acggccgagg acgtgacggc gagccggcgc gcggccctcg
     1081 cgacgctacc ctccgcgagc acggtgtgta gcaccaggag caagttgagg tcgaacgccg
     1141 cgaggttcac gtttgtgatg atctccatca cgaatcataa ctttacgtga cggttcgtgg
     1201 ccctacaaat cgagcatgtc gaaccccaat cacgatctaa acaaacgcgc ggtccgcagc
     1261 ctgttcgagg acggcttcaa tcaccagcgc ggcgacgtcc tcgcagcggt cgtcgcgccc
     1321 gagtacgtcg acgcgttcgg cgagcacggc gccgcggcgt tcgaaaaggt cattgccggg
     1381 ctgcgcggcg gctttcccga catcgagtac accgtggaag agctcgtcgc cgaagacgac
     1441 gcagtcgccg cgcgctggca ttggaccggc acacaccgcg gcgtgtttcg cggccttgcg
     1501 ccgaccgagc gccgcgtcac gaacaacgga cttgccatct ttcacctgcg ggccggcaag
     1561 gtcgtggccg cgacgctcga gacggatcgg ctcggcttct tgcaggggat cggcgtcgtg
     1621 ccgccgaacg aagcgctgtt cggagcgcgg gtcccgccga agccggaccc gtcgcccctg
     1681 agcgcgtgac tcggtcgagt cgagcgcgtc ccgctcgctg atgcgtgcgg ttaccctcac
     1741 gcaaggccga agaacgcggc ggtttcgctc cacatcgtct cgagttggtc gacgagctcg
     1801 tgccccgaat cgagccaaac cgcgcggacg ttcgggttct gcgaggccca tgactcgacg
     1861 gcggcgggcg ccaccgtggt gtcatgccga cccatgaaag cgagcgtcgg ggtgcgagcg
     1921 ggcggagcag ggtcgtaccg ttcgagatcg tcgtagagac cgtaaccgat gagccgctcc
     1981 tcgccgtagg cgtggtggaa gatcggcgcc gcaccagcgc tcttccagta cgccagcttc
     2041 tcggcgccgt agcgcacggc ccattgcgct ctcatgtcga tcgctggcgc catcagcatg
     2101 agccgctgga cgcgcgcctc ttccgccgct gcgagcaacg cgaggtatcc gcccatggac
     2161 gagccgatca gggcgagctc accgggcgcc cgagcgatcg cccggcgcac gacggcgagc
     2221 tgccgcgtga tcgtcaggcc ctcgaaatcg ccctcttcga ggtcgggcac gtcgacggcg
     2281 tggccgaggc aacgcagccg ttcgctgaaa aaaaccgcct tcgtcgatcg cgggctcgat
     2341 gcgaacccgt gaaggtagat gaagcgcatc gcgttacgcg tatacaacgg cgcgcagccg
     2401 gggcgtcatc acctcgcccc gcgcgaatct cgaacccaga gcgctgaacc tccgaccaga
     2461 ctgggcgatc ggaggttcat atcgggctcc gcgggggcga ttcgttcgat gtaccacgta
     2521 gttttctcgg cgattcgcgt agagctcgca gcgtgaagag ccatgaccga gaatgctata
     2581 ctgagtcgat gcgtgggctc aggcgcttgg gtgtggtcct gctgatgggg gtgtcag
//
LOCUS       DATIML010000547         2494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5308983, whole genome shotgun sequence.
ACCESSION   DATIML010000547 DATIML010000000
VERSION     DATIML010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5308983"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VLJ38_09425"
     CDS             complement(<1..389)
                     /locus_tag="VLJ38_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSU39779.1"
                     /translation="MSSVAVARRGHAVLVTLDRPDRRNALDRATVAELGRIGRELSPD
                     SSLRAVVLTGAGDRAFCAGADLKERESMSVDEVRAMLDAYRSELAWLGASPFPVVAAL
                     NGAALGGGLELALTCDLRVAAPHAVLGL"
     gene            complement(386..>2494)
                     /locus_tag="VLJ38_09430"
     CDS             complement(386..>2494)
                     /locus_tag="VLJ38_09430"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HSU39780.1"
                     /translation="WVALSNGEPRPVEKAKKKGGAWTYLFTLNQPHPSYLVTLVAGEL
                     AVVEGREAELGRRKIPVAYYVPPKRTRDVPRSLGDTPRMIELFSERTGVAFPWSRYSQ
                     VVVSDFIFGGMENTTATTLYEHVLLDERAALDVSSHDLVAHELAHQWFGDFVTCRDWS
                     HGWLNEGFATYFEHIEREARLGRDEYDYGVAGDLEAYLGEANGRYQRAIVCRDYKEPI
                     DLFDRHLYEKGGLVLHLLRRELGDDVFWDGVRLYLERHAHGIVETNDLLRALEEASGK
                     SLERFFDQWVYRPGHPELRVKIGWDDGLLSVEVKQKQKGNDVAVFEFPLQVLVKTKGG
                     AVERHEKRVTEASDTLVVRLAERPRFVVFNPDQSVVGSVSLEAPSDFLRHQLADGPSA
                     YAKWTAARSLGERDDPPSLRALADALASGDNAWMVRAEAARALGRVRSEAAFEALAAH
                     VKDAQPKVRRAVVEALGAFRTKAAAEVLRGPARNDRSYLVAADAARSLGRTRQPGVLR
                     ELLAVIDRPSWADAQRAGALDGLAQLRDEAALPEVIARSRYGIPTRGRRAAVAALAAL
                     SDSRETRRELEDLLDDRDPHFRITVVDALLTLGDTKARGALRRALDRELDGRVARRLR
                     EALRDLGESGSTERKRMADELESLRGEFAELKTRFAKIEGKHGGEHKTASKKPVPHAK
                     PAARAKPGRRAKRRTAAPRA"
BASE COUNT          359 a          856 c          895 g          384 t
ORIGIN      
        1 aggccgagca cggcgtgcgg tgcggcgacg cgcaggtcgc acgtgagcgc gagctcgagg
       61 ccgccgccga gcgcggcgcc gttcagcgcg gcgacgacgg ggaagggcga cgcgccgagc
      121 cacgcgagct cgctgcggta cgcatcgagc atcgcccgca cttcgtcgac gctcatgctc
      181 tcgcgctctt tgaggtcggc gccggcgcaa aacgcgcggt cacccgcgcc cgtgagcacg
      241 accgcgcgca ggctcgagtc cggcgaaagc tcgcgtccga tgcgtccgag ctcggcgacc
      301 gtcgcgcgat cgagcgcatt gcgacgatcc ggccgatcga gcgtgacgag gacggcgtgt
      361 ccgcgacggg cgacggcgac ggagctcatg cgcggggcgc ggccgtgcgc cgtttggcgc
      421 ggcgcccggg cttcgcgcgt gcggcgggtt tggcatgcgg gactggcttc ttgctggcgg
      481 tcttgtgctc gccgccgtgt ttgccctcga ttttggcgaa gcgcgtcttg agctcggcga
      541 actcgccgcg cagcgactcg agctcgtcgg ccatgcgctt gcgttcggtg gagccgctct
      601 cgcccaagtc gcgcagggct tcgcgcagcc gccgggcgac gcggccgtcg agctcgcggt
      661 cgagcgcgcg ccggagcgcc ccgcgcgcct tcgtatcgcc gagcgtcagc agcgcatcga
      721 cgaccgtgat gcgaaagtgg ggatcgcgat cgtcgagcag atcttcgagc tcgcgccggg
      781 tttcacgcga atcggagagc gccgccaggg ccgcgacggc ggcgcgccgg ccgcgcgtgg
      841 ggatgccgta acgcgagcga gcgatcacct cgggtagcgc ggcttcgtcg cgcagctgcg
      901 cgaggccgtc gagcgcgccg gcgcgctgcg cgtcggccca cgacgggcga tcgatcacgg
      961 cgagcagctc gcgcaagacg ccgggctggc gcgtgcggcc gagcgagcgc gcggcgtcag
     1021 ctgccaccaa atagctgcga tcgttgcggg cgggaccgcg caaaacctcc gcggcggctt
     1081 tggtgcgaaa ggcgccgagc gcctcgacca cggcgcggcg caccttcggc tgcgcgtctt
     1141 tgacatgggc ggcgagcgcc tcgaacgccg cttcactgcg cacgcgcccg agcgcccgcg
     1201 cggcctcggc gcgtaccatc caggcgttgt cgccgctcgc gagcgcgtcg gcgagcgccc
     1261 gcaggctcgg cgggtcgtcg cgttccccga gtgagcgcgc cgctgtccac ttggcgtacg
     1321 cgctcggccc gtcggcgagc tggtgcctca aaaaatcgga cggcgcctcg agactgacgc
     1381 tgcccacgac gctctgatcc gggttgaaca cgacgaagcg cggccgttcc gcgaggcgca
     1441 cgacgagcgt gtcggacgct tccgtcacgc gcttttcgtg gcgctcgacg gcgccgccct
     1501 tggtcttgac cagcacctgc agcgggaatt cgaagaccgc gacgtcgttg cccttctgct
     1561 tttgcttcac ctcgacgctg agtaagccgt cgtcccagcc gattttcacg cggagctcgg
     1621 gatgccccgg gcggtacacc cactgatcga agaagcgctc gagcgatttg cccgaagctt
     1681 cctcgagcgc gcgcagcaga tcattggttt cgacgatgcc gtgggcgtgg cgctcgaggt
     1741 agagccgaac gccgtcccag aacacgtcgt cgccgagctc gcggcgcaag aggtgcagga
     1801 cgagaccgcc cttttcgtag aggtgccgat cgaagagatc gatcggctcc ttgtagtcgc
     1861 ggcagacgat ggcccgctgg taacggccgt tcgcttcgcc gaggtacgct tcgaggtctc
     1921 cggcgacgcc atagtcgtac tcgtcgcggc cgagccgagc ctcgcgttcg atgtgctcga
     1981 agtacgtcgc gaagccctcg ttgagccagc cgtgcgacca gtcgcggcag gtgacgaaat
     2041 caccgaacca ctggtgcgcg agctcgtgcg ccacgaggtc gtgcgagctc acgtcgaggg
     2101 ccgcgcgctc gtcgagcagc acgtgctcgt agagcgtcgt cgccgtcgtg ttctccatac
     2161 ccccgaaaat gaagtcgctc acgacgacct gcgaatagcg gctccacgga aacgcgacgc
     2221 ccgtgcgctc ggaaaagagc tcgatcatgc ggggcgtgtc gccgaggctg cgcggtacgt
     2281 cgcgcgtgcg tttgggcggc acgtagtaag cgaccgggat cttgcggcgc ccgagctcgg
     2341 cctcacgtcc ctcgacgacg gcgagctcac cggcgacgag cgtcacgagg tacgacgggt
     2401 gcggctgatt gagcgtgaaa agatacgtcc acgcgccgcc cttctttttc gctttttcga
     2461 cgggccgcgg ctcgccgttc gagagcgcga ccca
//
LOCUS       DATIML010000548         3253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2706714, whole genome shotgun sequence.
ACCESSION   DATIML010000548 DATIML010000000
VERSION     DATIML010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2706714"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            355..849
                     /locus_tag="VLJ38_09435"
     CDS             355..849
                     /locus_tag="VLJ38_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39781.1"
                     /translation="MTVPTGAFDDGLALQQNDAGIYVLDSLGESFALGSELKVTGVLV
                     DSSGLLAIQPSSIQSVGRGQRIEAECRATGAVGERTEGQLLRLRGTMRGPLVDDSPYG
                     FKLDLDDGSGPIQVFLYPGTGIATDGLVDGRRLSIVCFSSQFETEYECDPRSPADLKL
                     LDNR"
     gene            complement(869..2452)
                     /locus_tag="VLJ38_09440"
     CDS             complement(869..2452)
                     /locus_tag="VLJ38_09440"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39782.1"
                     /translation="MSKNDGEAAKSAVIRVLVEKLPAMLAYWDSRQHCVFANRAYERW
                     FGVDPEALVGKHMSELLGPLYPLNLPHILGALRGEEQLFEREIPDPNGGPSRHSQAQY
                     IPDVVDGVVRGFCVLVVDITRHKQAEAVLRHRERQLEAAERANAMAALAGGVAHEINN
                     PLASVLANLDLALESLERVKRTDEAPKRIEDGLREARSGAERVARIVRSMQLFARADV
                     EKRELVDVNQVLELSIGLASNVIRYRALLVREFEAVAPVLASPTELAQAFVSLLVNAA
                     EGLPEQTPASNEIRVTTRNEGSSVVVEVADNGPGVPEELRSRIFERSFTTNHVGEGVA
                     LGLSLAQGLIAGLGGELSVASAVGGGSRYRVALPGTVRESKAPPDALGTRQIPGGSTR
                     QGRGGLGEAPLRVLVVDDEPAVSSVLGTMLARDFDVRVVNHGPDAIAALSSKDGAQFD
                     LVLCDLMMPEKSGVEVYAEVTRARPELADRFVFMTGGAYTARGREFLEAVEAPIIEKP
                     FELREVRALLLKHGARLRR"
     gene            2679..2930
                     /locus_tag="VLJ38_09445"
     CDS             2679..2930
                     /locus_tag="VLJ38_09445"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSU39783.1"
                     /translation="MMKSYQAIRQDVAEFLATNYDIALDSLAPEATLEDLGFDSLGMF
                     SVMTLLENKHGLRFEGAMLAGLRTVGDLLALLRAQSSGA"
     gene            2948..>3253
                     /locus_tag="VLJ38_09450"
     CDS             2948..>3253
                     /locus_tag="VLJ38_09450"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HSU39784.1"
                     /translation="MGERKRVAITAIGLVTPLGIGTEASWQRLTEGASGVRRITLFDA
                     SSSRVQIAGEVAGFEPRRFLDFKDTQRLARVGQLAVAAAELALGSGALVGLERETIGT
                     "
BASE COUNT          539 a         1077 c         1074 g          563 t
ORIGIN      
        1 acgagatctg cggcggaagt ccgccctcgc tcgattgagg gctcgcgcgg cgtcccgcgg
       61 gcggctccgc gacggagcgc gccctcaaca agtgacgcgt tgacgcgcca aggacgtcgg
      121 ataccatgcg tccggctggc actggtcgag ggcgcggtac gcctccgcgc ggcacgcgcc
      181 taccatcaat cgacggagag tttcatgcac aggtcgtctt gcgctcgcct agttctcttg
      241 ctcggaataa gcctgaccgt ccctggatcc gtactggctc gtccggctca cggcggcacg
      301 atcgccgcgg cacgccgaga gccgctcgga gccaccgtca ccgtgattgg cagcgtgacc
      361 gtcccgaccg gcgccttcga tgacggcctt gctctccagc aaaatgatgc aggcatctac
      421 gtcctagact cgctcggcga aagcttcgcg ctcggcagcg agctcaaggt cacgggcgtc
      481 ctcgtcgatt cgtccggtct cttggcgatc caaccgtcct ccatccagtc cgtgggacga
      541 ggccagcgca tcgaggccga gtgccgcgcg accggtgcgg tcggcgagcg aacggagggt
      601 caattgctga ggttacgtgg gaccatgcgc gggccgctcg tcgacgacag tccttacggg
      661 ttcaagctgg acctcgacga cggctcgggt cccatccagg tgttccttta tccgggaacg
      721 ggcattgcca ccgacggact cgtggacggc cgtcggcttt ccatcgtgtg cttcagcagc
      781 cagttcgaga ccgagtacga atgtgatccg cgttcgccgg cggacttgaa gctcctcgac
      841 aatcggtaag gtgcggggcc gccgtcggtc accgtcgaag gcgagctccg tgcttcagta
      901 gtaacgctcg cacctcgcgc agttcgaacg gcttctcgat gatgggggcc tcgacggcct
      961 ccaagaactc gcgcccccgc gcagtgtatg cgccacccgt catgaaaacg aagcggtcgg
     1021 ctagctcagg ccgcgcgcgc gtgacctcgg cgtagacctc gacgccgctc ttctccggca
     1081 tcatcagatc gcacaagacg aggtcgaact gtgctccgtc tttggacgag agtgcggcga
     1141 tggcgtcggg accatggttg acgactcgca cgtcgaagtc gcgagcgagc atcgtgccga
     1201 gcacgctcga aacggccggc tcgtcgtcga cgacgagcac acgtagcggc gcttcgccga
     1261 gccctcctct gccctgcctc gtggagccgc cggggatctg gcgcgttccg agcgcgtcag
     1321 gcggagcttt tgattcgcgc accgtgcccg ggagcgcgac gcgatacctg ctgcccccgc
     1381 ccacggcact ggccaccgac aattcgccgc ccaacccggc gatcaggcct tgcgccagcg
     1441 aaagtccgag ggccacgcct tcgcccacgt ggttcgtggt gaaagaccgc tcgaaaatgc
     1501 gggagcgaag ctcttcgggg actccgggac cattgtcggc gacttcgacc acgacggacg
     1561 aaccctcgtt gcgcgtcgtg acgcggattt cgttcgatgc gggcgtttgc tccggcaatc
     1621 cctcggcagc gttcacgagc aagctcacga acgcctgcgc gagctcggtc ggactcgcga
     1681 gcaccggcgc gacggcttcg aactctcgca cgagcagggc ccgatagcga atcacgttcg
     1741 acgcgagtcc aatgctgagc tcgagaacct ggtttacatc gacgagctcg cgcttttcga
     1801 cgtcggcacg ggcgaagagc tgcatgctgc gcacgatcct ggcgacgcgt tccgctcccg
     1861 agcgcgcctc gcgcagtccg tcttcgatgc gtttcggagc ctcatcggta cgcttcacac
     1921 gctcgaggct ctcgagggcg agatcgaggt tggcgagcac ggaggccagg gggttattga
     1981 tctcgtgcgc gacgcccccc gcgagagcgg ccatcgcatt cgccctttcc gctgcttcga
     2041 gctggcgctc gcggtgccgg agcaccgctt cggcctgctt gtgccgcgtg atatccacga
     2101 ccagcacgca aaagccccgg acgacgccgt cgaccacgtc gggaatgtat tgagcctggc
     2161 tatgacgcga cgggccgccg ttcgggtccg ggatctcgcg ctcgaagagc tgctcttccc
     2221 cgcggagcgc gcctaggatg tgcggcaggt tcagggggta gagtggcccc aagagctcgg
     2281 acatgtgctt gccgacgagc gcttccgggt cgacgccgaa ccagcgttca taggcgcgat
     2341 tcgcgaacac gcagtgctgt cgagagtccc agtaggcgag cattgccggc agcttctcga
     2401 cgagcacgcg tatgaccgcg gattttgcag cttcgccgtc gttcttcgac atggctcatc
     2461 gcccagcaag ccgcatgcta caccgcagcc cggctggggt gacggaacta aagaaacact
     2521 cgcagacaaa ctgcgccgaa tgagccacgt cgatcccccg gccgtccgcg cacgaactgc
     2581 gcttcgggtt tccggacgcg cgaaggattg tggcctcttg cccccgtggc cgccagagcg
     2641 agcgggtgct attctcgatg cttaccgcag cgcaccgaat gatgaagagc taccaagcga
     2701 tccgccagga tgtggccgag tttctggcca cgaattacga catcgcgctc gactcgctgg
     2761 ccccggaggc gacgctcgaa gatctcgggt tcgattcgct tgggatgttc agcgtcatga
     2821 cgctgctcga gaacaagcac gggctccggt tcgagggcgc catgctggcg ggactgcgga
     2881 ccgtgggcga cctgctcgcg ctgctgaggg cgcagagctc gggcgcctag acacagagga
     2941 ctcggccgtg ggcgaacgaa agcgggttgc tattaccgcg attggactcg tgacgccgct
     3001 cggcatcggg accgaggcgt cttggcagcg gcttaccgaa ggcgccagcg gcgtccgccg
     3061 tatcacgctg ttcgacgcaa gctcgagtcg tgtgcagatc gcgggcgagg tcgccggctt
     3121 cgagccacgg cgcttcctcg atttcaaaga cacgcagcgg ctcgcgcgcg tgggacagct
     3181 ggccgtcgcg gcggccgagc tcgctctcgg cagcggtgct ctcgtggggc tcgagcgcga
     3241 gacgatcggg acg
//
LOCUS       DATIML010000549         3176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2996928, whole genome shotgun sequence.
ACCESSION   DATIML010000549 DATIML010000000
VERSION     DATIML010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2996928"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..2213
                     /locus_tag="VLJ38_09455"
     CDS             21..2213
                     /locus_tag="VLJ38_09455"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSU39785.1"
                     /translation="MQLEAPFDPHEESHDHHIVGSPAHETEGGRVLKHDDAFLIVSRL
                     GEIQATGRGEQGIYFRGTRYVSRLRVRFARRPSMLLCSSVLENNLLLAVDLSNPEMHL
                     GDRLIPHGTIHLARRALLRDGAYYERVSLRNYTGGGVDFPLTIEFDADFADIFEVRGT
                     PRMKRGERSEAVIAATSVRLPYVGLDGVERTSEFSFSRRPERLSANEATFELSLDAMA
                     ELDFEWQIAFQPVEREQRRSVDFGAAAHGAHQALERDQDDETRVFSSNGHFNRWLERS
                     RADLRMLCTATEYGSYPYAGVPWFSTVFGRDGIWTALQMLWVDARMAAGVLRFLAAHQ
                     ALALDADSDAEPGKIVHEMRQGEMAALREVPFGRYYGSIDSTPLYVMLAAAYYDVTGD
                     IGLIREIWPALERAMTWLDQYGDQDGDGFVEYGRRSKDGLVQQGWKDSQDSVSHADGS
                     LADGPIALCEVQGYAYAARLGIARLSAALGDDVRAAHCDSLARELQARFDAAFWCEEL
                     GVYALALDGKKRPCRVRSSNVGHCLYTKIALPSRARAIQARLLSDEMFSGWGVRTLAT
                     NERRYNPMSYHNGSVWPHDNAIIALGCSEYGGRELPLRVLESFYEAASFAEFQRLPEL
                     FCGFLRRPGQEPIRYPVACLPQAWAAASPFSFLHAVLGLHINAREKRVTLCRPQLPSF
                     IESLEIRRLRVGNEHIDLRLVRYPEDVAVTVLQASGSVDLAVLKSTAS"
     gene            complement(2287..>3176)
                     /locus_tag="VLJ38_09460"
     CDS             complement(2287..>3176)
                     /locus_tag="VLJ38_09460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39786.1"
                     /translation="REYDKEGKPTGKVAPSFHAYGGGIVSVHFTDWLYGTIELVVLPN
                     GSWHIVGEVGIAETVKITKDPLLDKKLPIGRPIDLDFSFINLGVASLYVKIGGSLEAF
                     ARLDPLELRKAFFRVKYNPEKEEETSVVGAGILALPATVGITAELHLGVGGRVLVFTA
                     EIVGHVSVTAALNLLAELAAGFEWRPGKGIVLAGYAALTAQAELTFRVFATFDVNLDL
                     WLYTKNLYHHDFGGKTLSYKPPLRVGAMFPFAYREGQPFDVDIHDIKFVEPDFDREAT
                     MKEMFNHARKEDGPDHDNS"
BASE COUNT          517 a         1026 c         1056 g          577 t
ORIGIN      
        1 cgcggacggg ggtgaggtca atgcagcttg aggcgccgtt cgatccacac gaagaaagcc
       61 acgatcatca catcgtcggc tcgcccgcgc acgagacgga gggcggtcgt gtgctcaagc
      121 acgacgatgc cttcttgatc gtgagccggc tgggcgaaat tcaggcgacc gggcgggggg
      181 agcagggcat ttattttcgc gggactcgtt acgtgtcgcg cctgcgcgtg cgcttcgcgc
      241 ggcggccgag catgctgctc tgctcgagcg tgctcgaaaa taatctgctg ctcgcggtag
      301 acctttccaa ccccgagatg cacctcggcg atcggctgat cccgcacggg acgatccatc
      361 tcgcgcggcg cgcgctcttg cgcgacggcg cgtattacga gcgagtgagc ctacgcaact
      421 acacgggcgg cggcgtcgac tttccgctca cgatcgagtt cgacgccgac tttgcggaca
      481 tcttcgaggt gcgcggcacg ccacgcatga agcgtggtga gcgtagcgag gcggtgattg
      541 ccgcgacgtc ggtgcggctg ccgtacgtcg gcctagacgg tgtggaacgc accagcgagt
      601 tcagcttctc gcgtcgcccc gagcgcctga gcgcgaacga agcgaccttc gagctctcgc
      661 tcgacgccat ggcggagctc gacttcgagt ggcaaatcgc ctttcagccc gtggaacgcg
      721 agcagcggcg cagcgtcgat ttcggcgcgg cggcgcacgg cgcgcaccaa gcgctcgagc
      781 gcgatcaaga cgacgagacg cgtgtcttca gctcgaacgg tcacttcaac cgttggctcg
      841 agcgctcgcg cgcggatctg cgcatgctgt gcacggcgac ggagtacggc tcgtacccgt
      901 acgccggcgt gccctggttc agcacggtgt tcggacgtga cggcatctgg accgcgctgc
      961 agatgttatg ggtcgatgcg cgcatggccg cgggcgtgct ccgctttctc gcggcgcacc
     1021 aggcgctcgc gctcgacgcc gactccgacg ccgaaccggg caagatcgtg cacgagatgc
     1081 ggcaggggga gatggcggcg ctgcgcgagg tgccgttcgg ccgctactac ggcagcatcg
     1141 attcgacgcc gctctacgtc atgctcgccg cggcctatta cgacgtcacg ggcgacatcg
     1201 ggctgattcg cgaaatctgg cctgcgctcg agcgcgccat gacttggctc gaccagtacg
     1261 gcgatcaaga cggtgacggt ttcgtcgaat acggccggcg ttcgaaagac gggctcgtcc
     1321 aacaggggtg gaaggattcg caagactccg tttcccacgc cgacgggtcg ctcgccgacg
     1381 gtcccatcgc tctctgcgaa gtccaaggtt acgcctacgc ggctcggctc ggcatcgcgc
     1441 gactctcggc ggcgctcggc gacgacgtgc gagccgccca ttgcgacagc ctcgcgcgcg
     1501 agctccaggc gcgcttcgac gccgcgtttt ggtgcgaaga gctcggcgtt tacgccctcg
     1561 cgctcgacgg caagaagcgg ccctgccgcg tgcgaagctc gaacgtcggg cattgcttgt
     1621 acaccaagat tgcgctgcct tcgcgcgccc gagcgatcca ggctcgcctg ctctcggacg
     1681 agatgttctc cggctggggc gtacgcacgc tcgccacgaa cgagcggcgc tataacccca
     1741 tgtcctatca caacggctcg gtgtggccgc acgacaatgc catcatcgcg ctcggctgct
     1801 cggagtacgg aggccgcgag ctcccgctcc gcgtgctcga atctttttac gaagcggctt
     1861 catttgccga gtttcagcgc ttaccagagc tcttttgcgg atttctgcgg cgcccagggc
     1921 aagagccgat ccgctatccg gttgcgtgct tgccgcaggc gtgggctgca gcgtcgccgt
     1981 tttcgttttt gcacgcggtc ctcggtttgc acatcaatgc acgggaaaag cgggtgacgc
     2041 tctgccgccc gcagctcccc tcgttcatcg agtcgctcga aattcggcgc ctgcgcgtcg
     2101 gcaacgagca catcgacctg cgcctcgtgc gctaccccga ggacgtcgcc gtcaccgtgc
     2161 tccaggcgag cggctcggtc gacctggccg tgctcaagtc gacggcgtcg tgaacgtcag
     2221 cacgccgatc ggatcgcggt ttggcacggc gtcgggttcg tcgtcgatgg cgcgaggctc
     2281 gccgcgtcac gaattatcgt ggtccgggcc gtcctccttg cgtgcgtgat tgaacatctc
     2341 tttcatcgtc gcctcgcggt cgaagtccgg ctcgacgaac ttgatgtcgt gaatatcgac
     2401 gtcgaagggc tgaccttcgc gataagcgaa gggaaacatc gccccgacgc ggagaggcgg
     2461 cttgtagctc aaggtcttac cgccgaagtc gtggtggtag aggttcttcg tgtaaagcca
     2521 gagatcgagg ttcacgtcga aggtcgcgaa gacgcggaag gtcagctcgg cttgcgcggt
     2581 gagcgccgca tagccggcga gcacgatgcc tttaccgggg cgccactcga agcccgcggc
     2641 gagctcggcg aggaggttca acgccgccgt gaccgagacg tgcccgacga tctccgccgt
     2701 gaacacgagc acgcgcccgc ccacgccgag gtggagctcg gccgtgatgc ctaccgtggc
     2761 cggcagcgcg agaatgcccg cgccgacgac gctcgtctcc tcttccttct cggggttgta
     2821 cttgacccga aagaaggctt tgcggagctc cagcgggtcg agccgagcga acgcctcgag
     2881 gctgccgccg atcttgacgt acaggctcgc gacaccgagg ttgatgaacg aaaaatcgag
     2941 gtcgatcggc ctgccgatcg ggagtttctt gtcgagcagc ggatccttcg tgatcttgac
     3001 ggtctcggcg atgcccacct cgccgacgat gtgccaggag ccgttcggca ggacgacgag
     3061 ctcgatggtc ccgtagagcc aatccgtgaa atggacgctg acgatgccgc cgccgtaggc
     3121 gtggaacgag ggcgccacct tgcccgtcgg cttgccctcc ttgtcgtatt cgcgat
//
LOCUS       DATIML010000550         2852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1267558, whole genome shotgun sequence.
ACCESSION   DATIML010000550 DATIML010000000
VERSION     DATIML010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1267558"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1504)
                     /locus_tag="VLJ38_09465"
     CDS             complement(<1..1504)
                     /locus_tag="VLJ38_09465"
                     /inference="COORDINATES: protein motif:HMM:NF020076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HSU39787.1"
                     /translation="MTTQPKHELCAEVTANLATILDGSARAPLYEHLAECDTCRDARH
                     DAEQASALAVAAGADHHAASELEARVLAALEGEQEPGTAVPESAKTQARAEPRPGASK
                     QRRSDRRVTGAVLLLAAAAAIAVAFRGAKHEALADGHGWSATLQRALSAGAGARVLAC
                     AADGNACRTLAPGAAVPKAARVKTDATTRAELRFGDGSVLTLDHDTELALTGPRRARL
                     VTGGLVADIAHAESEARVDVAGGTVTVHGTKFALRARGDAATVDVARGAVTLADHDAH
                     RVRVNEGETGRLEAGSEPSVGFSSALGETLGWSDETFDAERAEPATARGLGELRAKKP
                     GQTEERSNAVTLASHRVRVRIAGAVARTEVEEVFENATNDVLEGIYRFPLPPGAQIER
                     LALDVDGKLEEGAFVDRDRAAAIFRGAIVNAAPKAPRPLDDIVWVPGPWRDPALLEWQ
                     RGGRFELHVFPIPKHGSRRVVLAYTEVVNPSGDRRRYTYPLAYDPSGTTRV"
     gene            complement(1501..2103)
                     /locus_tag="VLJ38_09470"
     CDS             complement(1501..2103)
                     /locus_tag="VLJ38_09470"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39788.1"
                     /translation="MNSAILMVEPGVRAPAEVESGDAEIVAAIRRGERRVALALCARR
                     HGSALGRVCMAMLGSQAEADDAVQETLLAAHGGFEAFRGDGSLRAWLFGIARRRCARV
                     LERRGVTGAAVEQADLRTADVLLDVRRRAETARELLARVRPSEREALLLRYAGELSFR
                     EVGEAVGVDEATARKRVSRALARLRELARESPPLAARRDE"
     gene            complement(2289..2666)
                     /locus_tag="VLJ38_09475"
     CDS             complement(2289..2666)
                     /locus_tag="VLJ38_09475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39789.1"
                     /translation="MSNSEPSDLETTVAGDVSVVGGVAPGEKLPTLEQVRGPGAPRRF
                     PLAAVETVVRAKKARWGHARANTVADLAHQAGVKQCAVFHHDPLHSDELVDRKIAVAK
                     ARLEAHGSSTLLLGARERLELKF"
BASE COUNT          366 a         1059 c          976 g          451 t
ORIGIN      
        1 gcacgcgcgt cgtgccgctc gggtcgtagg cgagcgggta ggtgtaacgc cgccggtcgc
       61 cgctcggatt gacgacctcg gtgtacgcga gcacgacgcg gcgcgagccg tgcttcggaa
      121 tcgggaacac gtgcagctcg aagcggccgc cgcgttgcca ctcgagcagc gccggatcgc
      181 gccacggtcc gggcacccac acgatgtcgt cgagcgggcg cggcgccttg ggagcggcgt
      241 tgacgatggc cccacgaaaa atggcggcgg cgcggtcgcg atccacgaac gcgccttcct
      301 cgagcttgcc gtcgacgtcg agcgcgagcc gctcgatttg cgcgccgggc ggcagcggga
      361 agcggtaaat cccttcgagc acgtcgttcg tcgcgttctc gaacacctct tcgacctccg
      421 tgcgcgcgac ggcacccgcg atgcgcacgc gcacgcgatg tgaggcgagg gtgacggcgt
      481 tgcttcgctc ctccgtctgt cccggcttct tggcgcgaag ctcgccgagg cctcgcgcgg
      541 tcgccggttc ggcgcgctcg gcgtcgaagg tttcgtcgct ccagccgagc gtttcgccga
      601 gcgcgctcga aaacccaacg ctcggctccg agcccgcttc gagccgcccg gtctcgcctt
      661 cgttcacgcg cacgcggtga gcgtcgtgat cggcgagcgt cacggccccg cgggcgacgt
      721 cgaccgtcgc cgcgtcaccc cgcgcgcgga gcgcgaattt cgtgccgtga acggtgaccg
      781 tccccccggc cacgtcgacg cgcgcttcgc tttcggcgtg cgcgatgtcc gcgacgagcc
      841 cgcccgtcac gagccgggcg cgacgagggc ccgtgagcgc gagctccgtg tcgtggtcga
      901 gcgtcagcac gctgccgtcg ccgaagcgga gctcggcgcg cgtggtcgcg tcggtcttca
      961 cgcgtgcagc cttgggcacg gccgcgcccg gcgcgagcgt tcgacaggca ttgccgtccg
     1021 ccgcgcacgc gagcacccgc gcacccgcgc ccgcgctcag ggctcgctgg agcgtcgcgg
     1081 accagccgtg tccgtcagcg agcgcttcgt gcttggctcc tcgaaaagcg accgcgatgg
     1141 ccgccgctgc ggcgagcaac aacacggcgc ccgtgacgcg ccgatcgctg cgccgctgct
     1201 tgctcgcccc cggtctcggc tcggcgcgcg cctgcgtctt tgcgctctcc ggcaccgccg
     1261 tcccgggctc ctgctcgccc tcgagcgcgg cgagcacgcg cgcttcgagc tcactcgctg
     1321 cgtggtgatc ggcgccggcc gccacggcga gcgcgcttgc ctgctcggcg tcgtgtcgcg
     1381 cgtcgcgaca ggtgtcgcac tcggcgaggt gttcgtacag tggtgctcgg gcgctgccgt
     1441 cgaggattgt ggcgagattc gccgtgacct cggcgcagag ctcgtgtttt ggctgcgtcg
     1501 tcattcgtct ctccttgcgg cgagcggcgg actttcgcgt gcgagctccc gcagccgcgc
     1561 gagcgcccgc gaaacacgtt tgcgcgccgt ggcttcgtcg acccccaccg cttcgccgac
     1621 ttcgcgaaaa ctgagctcgc ccgcgtagcg caagagcagc gcctcacgtt cgctcggtcg
     1681 cacgcgcgcg agcaactctc gcgcggtctc ggctcggcgt cgcacgtcga gcagcacgtc
     1741 cgccgtccgc agatccgctt gttcgacggc cgcccccgtc accccgcggc gctcgaggac
     1801 gcgcgcgcag cgccggcgcg cgatgccgaa cagccaggct cgcagcgacc cgtcgcctcg
     1861 aaacgcctcg aacccgccgt gcgccgcgag cagcgtctcc tgtacggcgt cgtccgcttc
     1921 ggcctgtgag ccgagcatgg ccatgcagac gcggccgagc gcgctgccgt gtcgccgagc
     1981 gcagagcgcg agcgcgacgc gccgttcccc gcgccggatc gccgcgacga tttcagcgtc
     2041 gccgctttcc acttcagctg gggcgcgcac gcctggctcc accatcagta tcgccgagtt
     2101 caagcttttc tccgagcgtc agtgcccacg tgcacccgag cacgaaattc gtgaccgact
     2161 cacgccggtc gcaacgaaga acgacgaacc ccgctcgatc tttcagtgac gacgcgaatg
     2221 ccggaggagc tcgccctact cctgcctaca tcccgcgagg cgggagcgag ctgtcccgac
     2281 tcggggcctt agaatttcag ctccagcctc tcgcgcgccc ccaacaagag cgtcgatgag
     2341 ccgtgcgctt cgagtcgagc cttggcgacg gcgatctttc gatcgacgag ctcgtccgag
     2401 tggagcggat cgtgatggaa gaccgcgcac tgcttgacgc cggcttggtg cgccagatcg
     2461 gcgacggtgt tggcgcgcgc atgcccccag cgggccttct tcgccctcac caccgtctcg
     2521 acggcggcga gcggaaacct ccgcggcgcg cccggcccgc gcacctgttc gagcgtgggc
     2581 agcttctcgc ccggcgccac gcccccgacg accgaaacgt cgcccgcgac ggtcgtctcc
     2641 aggtcggatg gctcggagtt cgacaaagcg tgcccaggat tttatccgag tcgaccaagg
     2701 gagtcatgca caagctcgct cccgcgcggg tcctggcggc gggcacgcct cgtcgcgcgt
     2761 cggcgagtgt ctgcgcgcgc ggcgggtggt agagtcgagc gtgcgccggc ctggcgcgga
     2821 ggtcctacga tgtttcgctc catcctcgtg cc
//
LOCUS       DATIML010000551         5174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4440385, whole genome shotgun sequence.
ACCESSION   DATIML010000551 DATIML010000000
VERSION     DATIML010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5174
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4440385"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..531
                     /locus_tag="VLJ38_09480"
     CDS             <1..531
                     /locus_tag="VLJ38_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU39790.1"
                     /translation="LDDYDSGEYWLGEQLIRALPERVAAQYRSRYIGFVFQSFNLLGF
                     KTAQENVALPLYYQGVSRRARNELALEYLDRVGLKPRAHHLPAELSGGERQRVAVARA
                     LISEPKLVLADEPTGALDTDTSYELMDLLEAVNRSGITIVIVTHEPDIAARTRRVIRF
                     KDGRVLPEGAHETHAS"
     gene            557..1816
                     /locus_tag="VLJ38_09485"
     CDS             557..1816
                     /locus_tag="VLJ38_09485"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU39791.1"
                     /translation="MARLGLGWLSFASVEELFSTLGRHRLRTLLTGLSVAWGTFMLVL
                     LLGAGKGLENGIAWEFRDDAVNSIWTWTGLSSIPFAGRGPNRDIRLKNDDFAALERRV
                     SGIERLSGRYWFWGEFSVKNGDRHASFDVVGVHPDQRYLEKTLVIAGRYVNQRDIAER
                     RKVAVIGEPVQKALYGKLDPIGRNIEIRGLPYRVVGVFQDEGSEAELRRIYVPITTAQ
                     LVYNDPGRIHSLGLTVGDADTATSELIEREVHRLLAERHQVAMGDRRALRTQNNLVHF
                     KKIAAVITWVNGFVWFVSFGTLLAGMVSVSNIMLISVAERTREIGIRKALGATPLRLV
                     GMVLAEAVVITAIAGYAGVVAGVALVELAGKELHDAPFVRNPSVSLAIALQATALIVA
                     AGAFAGFFPALRAARVNPIVAMREGGQ"
     gene            1813..3072
                     /locus_tag="VLJ38_09490"
     CDS             1813..3072
                     /locus_tag="VLJ38_09490"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU39792.1"
                     /translation="MSSFFFDIDTWQEIWSTLKQNRLRALLTASGVFWGLFMLILLLG
                     LGRGLERGALALSELAPRAVYVWAQRTGVPYRGLQPGRFVRFEDEDIARLRAIPGVEF
                     VAARLRFGGWRDNAQVSHAGKTGAVNVLGDMPDYARIEPIGIDRGRFLNQPDELEARK
                     VAVIGSKARGVLFGDASPLGQRVEVNGVHFLVVGEIHSDKSGDDGDRINNTVFIPFRT
                     FQQTYNQRNRVGWFTLGVREGASSADVERDVRRVLAANHRVSPLDEQAIGSFDAAAKY
                     EKIRSLFAGIRTFVWFVGTLTLFSGVLGVSNILLIIVKERTREIGVRKALGATPGSIV
                     RLVVQESMALTTLAGYTGLVAGVAALEGIARLVEHLDGAPLRSPEVDFRAALVAALVL
                     VVAGAVAGIVPARHAAGIPPVEALRAE"
     gene            3160..4269
                     /locus_tag="VLJ38_09495"
     CDS             3160..4269
                     /locus_tag="VLJ38_09495"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU39793.1"
                     /translation="MLKRIVPFAITLGVLVAFSWTLLFLYQKSQAKPLVFKTEKPRVT
                     DIVKKAVAPGSIVPRKEVTIKSRVSGVLEKIEVVPGQHVKRGELIAKIRIIPDVVSLN
                     NAEARLRAAQISNDNAKAELARFERLHTQNLVGETEYNQQKLNAELKAQELEAADANL
                     QLVKVGASKKSGAISNVVYSTVDGTVLDVPVKEGGSVIEANNFNEGTTIASIADMRDL
                     LFSGTVDESEVGKIREGMPVAITVGALGERHFKGTLEYIAPKGVPKDGTIQFEVRARL
                     ELLPDVLLRANYSANADIILEHHDHVLAISENLVKYEGSKSFVEVETAARQFEKRAVK
                     LGLSDSIDVEVISGVDANATLKVEDGVDQAPVKAH"
     gene            complement(4299..4661)
                     /locus_tag="VLJ38_09500"
     CDS             complement(4299..4661)
                     /locus_tag="VLJ38_09500"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU39794.1"
                     /translation="MGTLRRIAPVFAVHDLSASLAHYRQLGFETTEYAGGGYGYAKRD
                     GIEIHLGLVPAGDARSTPSTAYVWVDDADELAETWRSAGVDVRGPEDTEWGQHEGAVI
                     DPDGNVIRFGSPSTARAG"
     gene            complement(4823..>5174)
                     /locus_tag="VLJ38_09505"
     CDS             complement(4823..>5174)
                     /locus_tag="VLJ38_09505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39795.1"
                     /translation="LTMLWPHVDDLHERASHLLVERWGLPRDVVEVVGHHHHLHTGPT
                     ARIAAAVRLADHLTEYFDCSVRGPKVDGERLPGDSIDAFDLETGAAELGLDDAAVKSV
                     LKDAERTIPDIALL"
BASE COUNT          873 a         1730 c         1706 g          865 t
ORIGIN      
        1 ctcgacgact acgactcggg cgagtactgg ctcggcgagc agctgattcg cgcgctgccc
       61 gaacgcgtcg ccgcgcagta caggagccgc tacatcggct tcgtctttca gtccttcaac
      121 ctgctcggct tcaagaccgc gcaggaaaat gtggccttgc cgctttacta tcaaggcgtc
      181 tcgcgccgcg cgcgcaacga gctcgccctc gagtacctcg accgcgtcgg gctcaagccg
      241 cgcgcgcatc acttgccggc cgagctttcg ggcggcgagc ggcagcgcgt cgccgtcgcg
      301 cgcgcgctca tcagcgaacc gaagctcgtg ctcgcggacg agccgaccgg cgcgctcgat
      361 acggacactt cgtacgagct catggatttg ctcgaggccg tcaaccggag cggcatcacc
      421 atcgtcatcg tcacgcacga gccggacatc gccgcgcgca cgcgccgcgt gattcgtttc
      481 aaagacgggc gagtgctgcc ggagggtgcg cacgagacgc atgccagctg agtcgaatgt
      541 gcgtagagtc cgcggcttgg cgcggctggg tctcggctgg ctcagcttcg cgtccgtcga
      601 agagctgttc tcgacgctcg ggcggcaccg gctgcgcacc ctgctcaccg gactgtcggt
      661 cgcgtggggc acgttcatgc tcgtgctctt gctcggcgcc ggcaaagggc tcgaaaacgg
      721 catcgcgtgg gaattccgcg acgacgccgt gaattcgatc tggacgtgga cgggcttgag
      781 ctcgattccc ttcgccggcc gcggaccgaa ccgggacatc cgtttgaaga acgacgactt
      841 cgcggcgctc gaacggcgcg tctccggcat cgagcggctg agcgggcgct attggttttg
      901 gggcgagttc agcgtgaaga acggcgaccg ccacgcgtcc ttcgacgtgg tcggcgtcca
      961 ccccgatcag cgctatctcg aaaagaccct ggtgatcgcg ggccgctacg tgaatcaacg
     1021 cgacatcgcc gagcggcgca aggttgccgt gatcggcgag cccgtccaaa aagcgctcta
     1081 cggcaagctc gatcccattg gccggaacat cgagatccgc ggcctgccct accgcgtcgt
     1141 cggcgtcttt caggacgagg gcagcgaggc cgagctccgg cgcatctacg tgccgatcac
     1201 gacggcccag ctcgtctaca acgaccccgg gcgcatccac tcgctcgggc tgacggtggg
     1261 cgacgccgac accgccacga gcgagctcat cgagcgcgag gtgcaccgcc tgctcgccga
     1321 gcgccaccag gtcgcgatgg gcgaccggcg cgcgcttcgc acgcaaaata acctcgtgca
     1381 cttcaaaaaa atcgcggccg tcatcacctg ggtcaacggc ttcgtctggt tcgtgagctt
     1441 cggcacactg ctcgccggca tggtgagcgt ctcgaacatc atgctgatca gcgtcgccga
     1501 gcgcacgcgc gagatcggca ttcgtaaggc gctcggcgca acgccgctcc gcctcgtcgg
     1561 catggtgctc gccgaggccg tcgtcatcac ggccatcgcc ggctacgcgg gcgtcgtcgc
     1621 cggcgtcgcc ctcgtcgagc tcgcgggcaa ggagctccac gacgcgccgt tcgtgcgcaa
     1681 tccctccgtg agtctcgcca tcgccttgca agcgacggcg ctcatcgtcg ccgcgggcgc
     1741 gttcgcgggg ttctttcccg cgctccgcgc agcgcgcgtg aatcccatcg tcgcaatgcg
     1801 cgaaggcggg cagtgagctc gttctttttc gacatcgaca cgtggcaaga gatctggtcc
     1861 acgctgaagc agaaccgcct gcgcgccctg ctcacggcga gcggggtgtt ctggggcctg
     1921 ttcatgctga tcctcttgct cgggctcggc cgcgggctcg aacgcggcgc gctcgcgctc
     1981 tccgagctcg cgccgcgcgc ggtgtacgtc tgggcccagc gcacgggcgt tccgtatcgc
     2041 gggttgcagc cgggccgctt cgttcgcttc gaggacgaag acatcgcgcg ccttcgcgcg
     2101 attcccgggg tcgagttcgt cgcggcgcgc ctgcgcttcg gcggctggcg cgacaacgcg
     2161 caggtgtcgc acgccggcaa gacgggggcg gtcaacgtcc tcggcgacat gccggactac
     2221 gcgcgcatcg agcccatcgg catcgaccgc gggcgcttct tgaatcagcc ggacgagctc
     2281 gaggcacgca aggtggcggt catcggcagc aaggcgcgcg gcgtgctttt cggggatgcg
     2341 agcccgctcg gccagcgtgt cgaggtgaac ggcgtgcact tcctggtcgt cggcgaaatc
     2401 cattccgaca agtccggcga cgacggcgat cgcatcaaca acaccgtgtt catcccgttc
     2461 cgcaccttcc agcagaccta caaccagcgc aatcgcgttg gttggttcac gctcggggtg
     2521 cgcgagggcg cctcgtccgc cgacgtcgaa cgcgacgtgc ggcgggtcct cgccgcgaac
     2581 caccgcgtga gcccgctcga cgagcaggcg atcggctcct tcgacgccgc cgcgaagtac
     2641 gagaaaatac gcagcctgtt cgccggcatc cgcacgttcg tctggttcgt cggtacgctc
     2701 acgctttttt cgggggtgct cggcgtgagc aacatcttgc tcatcatcgt caaggagcgc
     2761 acccgcgaga tcggcgtacg caaagcgctc ggcgcgacgc cgggctcgat cgtgcgtttg
     2821 gtcgtgcagg agtcgatggc gctcacgacc ctcgccgggt acacggggct cgtcgccggc
     2881 gtcgccgcac tcgaaggcat cgcgcgcttg gtcgagcacc tggacggcgc gccgctccgg
     2941 agcccagaag tcgattttcg agccgcgctc gtggccgccc tggtgctcgt cgtcgcgggc
     3001 gccgttgcgg gcatcgtccc ggcgcgtcac gcggccggca ttccgccggt ggaggcgcta
     3061 cgtgcggagt gacgacagcg tgcctctcgg cttgcggaga ctcgcccgtt acgtaacact
     3121 cgggagctcc gggagcgccc gctactccgg gcgcgccgca tgttgaaacg catcgtcccg
     3181 tttgcgatca cgctcggcgt cctcgtggcg ttcagctgga ctttgctctt tctctatcaa
     3241 aagtcgcaag cgaagccgct cgtcttcaag accgaaaaac cgcgcgtgac ggacatcgtc
     3301 aagaaggcgg tcgcgcccgg ctcgatcgtg ccgcgcaagg aagtcaccat caaatcgcgt
     3361 gtctccggcg tgctcgagaa gatcgaagtc gtccccggcc agcacgtcaa acgcggcgag
     3421 ctcatcgcga agatccgcat cattcccgac gtcgtgagcc tcaacaacgc cgaagcgcgc
     3481 ctgcgcgccg cgcaaatcag caacgacaac gccaaggccg agcttgcgcg cttcgagcgg
     3541 cttcacacgc agaatctcgt cggtgagacg gaatacaacc aacaaaagct caacgccgag
     3601 ctcaaagcgc aggagctcga agcggccgac gcgaacctcc agctcgtgaa ggtcggcgct
     3661 tcgaaaaaat cgggcgccat ctcgaacgtc gtctattcga ccgtcgacgg caccgtgctc
     3721 gacgtcccgg tcaaagaagg cggcagcgtg atcgaagcca acaatttcaa cgagggcacg
     3781 accatcgctt cgatcgccga catgcgcgac ctcttgtttt cgggcacggt ggacgagtcc
     3841 gaggtgggta aaatcagaga gggcatgccc gtcgccatca cggtcggtgc cctcggtgaa
     3901 cgacatttca agggcacgct cgaatacatc gcgccgaagg gcgtccccaa ggacggtacc
     3961 atccaattcg aggtccgcgc ccggctcgag ctcttgcccg acgtgctctt acgcgccaat
     4021 tacagcgcca acgccgatat catcctcgag catcacgatc acgtgctcgc catttccgag
     4081 aatctcgtca aatacgaggg aagcaagtcg ttcgtcgaag tggagacggc agcgcggcag
     4141 ttcgaaaagc gcgccgtgaa gctcggactc tccgacagca tcgacgtcga agtcatctcg
     4201 ggcgtcgacg caaacgccac gctcaaggtc gaggacggcg tggatcaggc gccggtgaag
     4261 gcgcactgaa cggcttcggc ccgtggacac cgcagcaatc agccggcgcg cgcagtgctg
     4321 ggcgagccga agcggatgac gttgccgtcc ggatcgatga cggcgccttc gtgctgtccc
     4381 cattcggtgt cttccggccc ccgcacgtcc acgccggcgg agcgccacgt ttcggccagc
     4441 tcgtcagcgt cgtcgaccca gacgtacgcc gtactgggag tcgagcgcgc gtcgcccgcg
     4501 ggcactagtc cgaggtggat ctcgatgccg tcacgcttcg cgtagccgta gcctccgccc
     4561 gcgtactccg tggtttcgaa gccgagctgc cggtagtgcg cgagcgaggc gctcaggtcg
     4621 tggaccgcga aaacgggcgc gattcgacgc aaggtgccca tgaacgaaga cgatagttct
     4681 gatgacggcg agcccgcaac gccgcacgct ttgcgctttg ctccggtcag ctcggtcgaa
     4741 agacgtgagc gggcgcgctc ctggcacggc aacgcttttc agcctctgcc ggccagcgcg
     4801 tacggcggca aaaaaaacta cgtcagagca acgcgatgtc cgggatcgtg cgttcggcgt
     4861 ccttgaggac gcttttgacg gcggcgtcgt cgaggccgag ctccgcggcg ccggtttcga
     4921 gatcgaaggc gtcgatgctg tcgccgggca ggcgttcgcc gtcgactttg ggaccgcgga
     4981 ccgagcagtc gaagtattcg gtgaggtgat cggcgaggcg gacggcggca gcgatgcgtg
     5041 cggtgggacc ggtgtgaaga tgatggtggt ggccgacgac ttccacgacg tcgcgcggca
     5101 ggccccagcg ctcgacgagc agatgcgacg cgcgctcgtg cagatcatcg acgtggggcc
     5161 agagcatggt gagc
//
LOCUS       DATIML010000552         4304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1554611, whole genome shotgun sequence.
ACCESSION   DATIML010000552 DATIML010000000
VERSION     DATIML010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554611"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="VLJ38_09510"
     CDS             <1..611
                     /locus_tag="VLJ38_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSU39796.1"
                     /translation="GLNVGVQDAVNLGWKLAQVVRGTSPETLLDSYHAERHPVGARVL
                     RNTMAQTALMRGDDRSRAAHESMSELLKLDEPRKRYAAMISGLDIQYDLGPGHPLLGR
                     RMPDLELVTDGGPRRVFALLHAARPVLLNLGEPSALDIAPWAERVRWVNARYEGAWEL
                     PVLGAVAAPAAVLIRPDGHVAWVGDGTDEGLSDALQRWFGAP"
     gene            743..1639
                     /locus_tag="VLJ38_09515"
     CDS             743..1639
                     /locus_tag="VLJ38_09515"
                     /inference="COORDINATES: protein motif:HMM:NF005495.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU39797.1"
                     /translation="MAISLKPLNEQVMVITGASSGIGLATALAAAQAGASLVLAARSS
                     DVLTSVAREIGERGGRVFAVVADVANPTDLERVADVALREFGRIDTWVNNAGISIYGR
                     LDEVALEDQRRLFDVNYWGVVYGSLIALRHLRTEGGAIINLGSEVSDAVAPLQGTYSA
                     SKHAVKGFTDALRVEVEEVDKAPVSITLIQPTAVNTPYPEHAKNYLSREPALPKPMVE
                     PERVAQAILDAAKSPTRDKKVGFMSTMNTLTAKLMPGIADKLSAKKVEPQQKNMPPQR
                     DPEGALYRASEDGRIHGSPAAE"
     gene            1664..3412
                     /locus_tag="VLJ38_09520"
     CDS             1664..3412
                     /locus_tag="VLJ38_09520"
                     /inference="COORDINATES: protein motif:HMM:NF024905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HSU39798.1"
                     /translation="MAAAGASEPRRSLAALADFVLVGDPDLSRLRLAARVVLTALTTA
                     ACLFPAARLLRASPVTPLLGVALGVMSVSVVKDAQPAEQRKTHLLLVVPALGAATLAA
                     ALAPYPFWAATTFVAVVAVAVAARRLGPRGSALGMLGFLAYFDAEFFGARFGELHFAL
                     AALVSGIGIAFVVRFGVIRETPERLLRRSFATLVRQARRVVRRALEPRGASSNDGAEL
                     ERELARLNDTALVVDQHLQTVSGSARRALRLAVLDLELAAARVGTQTGPAGELTTALE
                     RLEALERAPTRGANVPLAEQHRPSATAASEPVVSHGRGLDPSARRAVQAAVACAAAIA
                     AGHVISPNRWYWAVISAFVVFNQVETSSDTVRRAWHRVLGTVAGVLAGDVLAYFASGR
                     RAVELTLLFSCMFVGFYLLRFSYAWMVFWISALLALLYALLGRAVTPLLEIRVLETLA
                     GAAAGALAATVVLPTRGSTRTATLLLGLMDQLDAYLNAALVPGRSRAELADIGWHLEV
                     SLNELRGTARSSSLAPFSPRTRVLELVDAASSVVLLARDTILGGGADRNALERLDRAV
                     LNLGLATRAWCGGLGP"
     gene            complement(3409..3774)
                     /locus_tag="VLJ38_09525"
     CDS             complement(3409..3774)
                     /locus_tag="VLJ38_09525"
                     /inference="COORDINATES: protein motif:HMM:NF042735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSU39799.1"
                     /translation="MSTLDIAKRYVELVKEHKNEECLRELFAPDAVSVEAGGPPGKDR
                     ASRGLEAIREKSKWWADNHIVHSSALEGPYPNEDRFAVRFSFEVTFKPENRRFTMNEI
                     GLFTVKDGKITQEEFFYTT"
     gene            3869..>4304
                     /locus_tag="VLJ38_09530"
     CDS             3869..>4304
                     /locus_tag="VLJ38_09530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39800.1"
                     /translation="MRHTRRHRWTLLVAIPCAALACGGESNDKNPGAAGTPATGGAGG
                     SSGAGTGGSSGRGGSSMGGTGGSAGTGGSAGTAGAGCPEQPPADRSACSLSSEEQGFA
                     RATCTFGDDPRPSCRTMALCTQGHWQVTPPDAQACSAPPLPTA"
BASE COUNT          631 a         1436 c         1496 g          741 t
ORIGIN      
        1 agggactcaa cgtcggcgtc caggacgccg tgaatttagg ctggaaattg gcccaagtcg
       61 tcaggggcac ctcgcctgaa actctgctcg acagctacca tgccgagcgc caccccgtcg
      121 gtgcccgcgt gttgcggaac accatggcgc aaaccgcgct catgcgcggt gatgatcgaa
      181 gccgcgccgc gcacgagagc atgtccgagc tcttgaagct cgacgagcca cgcaaacgct
      241 acgcggccat gatctccggc ctcgacattc agtatgacct cggtccggga cacccgctgc
      301 tcgggcgtcg catgcccgac ctcgagctcg tcacggacgg cgggccacgg cgtgtgttcg
      361 cgctgctgca cgctgcgcga ccggtgttgc tcaatctcgg cgagccgagc gcgctcgaca
      421 tcgcgccctg ggccgagcgt gttcgctggg taaacgcgcg ctacgagggt gcgtgggagc
      481 tcccggtgct cggcgcggtt gccgctccgg cggccgtact gattcgtccc gacgggcatg
      541 tcgcctgggt gggagacggc acggacgagg gactttccga cgcgctccag cggtggttcg
      601 gtgcgccctg agcgcggagc tcgaggcatc gagcacccgc acgtatcggt gcgcctcgat
      661 gcggcacttt tggcgcgcgc gcatcgcaac ggacgacgac gcgagggcgc gtgctggtac
      721 gaaagatgcg agacgccatc gaatggcgat ttcactcaaa ccactgaacg aacaagtcat
      781 ggtcatcacc ggcgcctcga gcggcatcgg gctcgccacg gcactggccg cggcgcaggc
      841 gggcgcgagc cttgtgctcg ccgcgcgcag ttccgacgtg ctcacgtccg tcgcgcgcga
      901 gattggcgaa cgcggcgggc gagtcttcgc cgtcgtggcg gatgtcgcga atccgaccga
      961 tctcgagcgc gtcgccgacg tggcgctgcg cgaattcggt cgcatcgaca cgtgggtcaa
     1021 taacgccggg atctcgatct acggccgcct ggacgaggtc gcgctcgagg accaaaggcg
     1081 cctgttcgac gtgaactact ggggcgtcgt gtacggttcg ctcatcgcgc tccgccattt
     1141 gcgaacggaa ggtggcgcga tcatcaatct cggcagcgag gtgtccgacg ccgtggcgcc
     1201 gcttcagggc acctattcgg cgtccaagca cgcggtcaaa ggcttcacgg acgcgctccg
     1261 cgtcgaggtc gaggaagtcg acaaggcgcc cgtgtcgatc acgctgattc agccgacggc
     1321 cgtcaacaca ccgtaccccg agcacgccaa gaattacctg agtcgcgagc cggcgttgcc
     1381 gaagcccatg gtcgagcccg agcgcgtcgc gcaggcgatt ctcgacgccg caaagagccc
     1441 gacgcgtgac aagaaggtcg gcttcatgtc gacgatgaac acgctgacgg cgaagctcat
     1501 gccgggcatc gccgataagc tctccgccaa gaaggtcgag ccgcagcaaa agaacatgcc
     1561 tccacagcgt gatcccgagg gggcgctcta tcgcgcgagc gaggacggac gcatccacgg
     1621 ctctccagcg gcagaatgac gctgctcgcg ctgaagtagc gtcatggcgg cggcgggagc
     1681 gtcggagccg aggcgttcgc tcgccgcgct cgccgatttc gtcttggtcg gtgatcccga
     1741 tctgtcgcgg ctccgactcg ctgcgcgcgt ggtgctgact gcgttgacga ccgcggcttg
     1801 tttgtttccg gcggcgcgac tgctgcgcgc atcgcccgtg acgccactac tcggagtcgc
     1861 gctgggcgtc atgagcgtgt cggtcgtcaa ggacgcgcag cccgcggagc aacgtaagac
     1921 gcacctgctg ctcgtcgtgc cggcgctcgg agccgcaacg ctcgccgcgg cgctcgcgcc
     1981 ctacccgttc tgggccgcca cgacgttcgt cgcggtcgtc gctgtcgccg tcgcagctcg
     2041 gcgtttgggc ccgcgcggca gcgcgctcgg catgctcggc tttttggctt acttcgacgc
     2101 ggagttcttc ggggcccgct tcggtgagct gcattttgcg ctcgcggcgt tggtctccgg
     2161 tatcggcatc gcgttcgtcg tgcgcttcgg cgtcatccgg gagacccccg agcggctgct
     2221 gcggcgctcg ttcgcgacgc tcgtgcggca ggctcggcgc gtcgtgcggc gtgcgctcga
     2281 accgcgcggc gcgtcgagca atgacggcgc ggaactggag cgcgagctcg cgcgactcaa
     2341 cgacacggcg ctcgtcgtcg atcagcacct ccaaaccgtg agcggcagcg ctcggcgcgc
     2401 gctgcggctc gcggtgttgg atttggagct tgcggcagct cgcgtcggga cgcagacggg
     2461 accggcaggc gagctgacca ccgcgctcga acggctcgaa gcgctggaac gagctccaac
     2521 gcggggagcc aacgtgccgc tcgccgagca gcacaggccg agcgcgaccg cagcgtccga
     2581 gcctgtcgta tcccacgggc gaggcctcga cccgagcgcg cgccgcgccg tccaagctgc
     2641 ggtcgcttgt gcggccgcga tcgcggccgg gcacgtcatc tcgccgaacc gctggtactg
     2701 ggcggtgatc agcgcgttcg tcgtgttcaa tcaagtcgag acttcgtccg acaccgtgcg
     2761 tcgcgcgtgg catcgcgtgc tcgggacggt cgcgggcgtg ctggcgggcg acgtcttggc
     2821 ctatttcgcg tccgggcgcc gcgcggtcga gctcacgttg ctgttctcct gcatgttcgt
     2881 gggcttttat ctgctgcgtt tctcgtacgc gtggatggtg ttctggatca gcgcgctgct
     2941 cgctttgctg tatgcgttgc tcgggcgcgc ggtgacgccg ctgctcgaga tccgcgtgct
     3001 cgagacgctg gcgggcgcgg cggcgggcgc gctcgcggcc acggtggtgc ttccaacgcg
     3061 ggggtcgacc cgaacggcaa cgctactgct cggtttgatg gaccagctcg atgcctacct
     3121 gaacgcggcg ctcgtgccgg ggcgatcgcg tgccgagctc gccgatatcg gctggcacct
     3181 ggaggttagc ttgaacgagc tccgaggaac ggcgcggtcg tcctcgctcg cgccgttctc
     3241 gccgcgcacg cgcgtactcg agctcgtcga cgctgcctcg tccgtggtgc tcctcgctcg
     3301 cgacacgatc ctcggaggcg gcgcggatcg aaacgcgctc gagcgcctcg accgcgccgt
     3361 cttgaacctc ggcctcgcga cgcgcgcgtg gtgcggtggg ttaggcccct aagtcgtgta
     3421 gaagaattct tcctgcgtga tcttgccgtc tttgaccgtg aacaagccga tctcgttcat
     3481 ggtgaaccgg cggttttccg gcttgaaggt gacctcgaag ctgaagcgca ccgcgaaacg
     3541 gtcctcattc gggtacggac cctcgagggc ggagctgtgc acgatgtgat tgtccgccca
     3601 ccacttgctc ttctcgcgga tcgcttcgag acctcgtgac gcgcgatctt tgcctggcgg
     3661 accgcccgcc tccacgctca cggcgtcggg cgcgaaaagc tcgcgcaggc actcctcgtt
     3721 tttgtgttct ttcacgagct cgacgtaacg ctttgcaata tccagggtcg acatgacggg
     3781 cctcgctttc gctgacgaac gtcttatcgg tcgggctgcg ccaaacgcaa ggggctcggg
     3841 agggcgccga tcaaagtaca cttcgctcat gcgccatact cgcaggcatc gctggacttt
     3901 actggtcgct attccgtgcg cggcgctcgc ctgcggcgga gagagtaacg acaagaatcc
     3961 cggagccgcg ggcactccgg cgacgggcgg ggccggcggc tcgagcggcg ccgggacggg
     4021 cggcagctca ggtaggggcg ggtcgagcat gggcgggaca ggcggctctg ccggcacggg
     4081 cggctccgcc ggcacggcgg gcgccggatg tccggaacag ccacccgcgg accgcagcgc
     4141 ctgctcgctg tcgagcgagg agcaagggtt cgcgcgcgcc acgtgcacct tcggcgatga
     4201 tccgcgcccg agctgccgga ccatggcgct ctgtacgcag ggacattggc aggtgacccc
     4261 gcccgacgct caggcgtgca gcgcgccgcc attgccgact gcat
//
LOCUS       DATIML010000553         1515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_976647, whole genome shotgun sequence.
ACCESSION   DATIML010000553 DATIML010000000
VERSION     DATIML010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_976647"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..540)
                     /locus_tag="VLJ38_09535"
     CDS             complement(<1..540)
                     /locus_tag="VLJ38_09535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39801.1"
                     /translation="MGELGPTESFARVFRERARRVRARLLTRYLALGAAGGALAGGVL
                     AGLCWWLRFGRGRPWFFVASLVLGALAGVVVARRRRWTDAEVALYLDARLGTNEAITT
                     AVEAGESPMHVAVRTRATAALADAERERTSPRVLTRWHGLLPLGSAAAVWLSLIPLPP
                     APVLAVAPGAERVKQTHLDG"
     gene            659..>1515
                     /gene="panB"
                     /locus_tag="VLJ38_09540"
     CDS             659..>1515
                     /gene="panB"
                     /locus_tag="VLJ38_09540"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HSU39802.1"
                     /translation="MATPTKVTVPALRARKGKGPKISVVTAYDVTFARLFEQGGVDVL
                     LVGDSLGMVVQGQPTTLGVTLDEVIYHGRAVARGTERAHLVGDLPFMSYQTGVVPALE
                     AAGRMLKEGGFEAVKLEGGEIYAEHVHRLVSAGIPVMGHLGLLPQSVHAMGGFKVQGT
                     NAAAADKIVADAKILAEAGVYAMVLEAIPAELARRVTQAVSVPTIGIGAGPHCDGQVL
                     VGYDLLGMYSEFKPKFVKRFAEAGKLIVDATRAYVSEVENGEFPTLAHAFGAPKELGA
                     PAEQTGAKPV"
BASE COUNT          251 a          524 c          529 g          211 t
ORIGIN      
        1 accgtcgagg tgcgtttgct tcacgcgctc ggcaccggga gcgacggcga gcacgggcgc
       61 gggcggcagc ggaatcaggg acaaccagac ggccgcggcg ctaccgagcg gtaaaagccc
      121 gtgccagcgc gtgaggacgc gcggtgacgt gcgctcgcgc tcggcgtcgg cgagcgccgc
      181 cgtcgcgcgg gtacgcaccg ccacgtgcat cggcgattcg ccggcttcga cggcggtcgt
      241 gatcgcttca ttcgtgccga gccgcgcatc gagatagagc gccacctcgg cgtccgtcca
      301 gcgccgccgg cgggccacga ccactcccgc gagtgcgccg aggacgagcg acgcgacgaa
      361 gaaccacggc cgcccgcgcc cgaagcgcag ccaccagcag agcccggcga gcacgccgcc
      421 cgcgagtgcg ccgcctgccg caccgagcgc caagtaacgc gtcagaagcc gcgcgcgcac
      481 tctccgcgca cgctcgcgga agacgcgcgc gaagctctct gtcgggccaa gctcgcccat
      541 ggaagagcta tagcgtagcg ggttttacgc cgtcgagcgg cgctcggaaa aactgccgaa
      601 atccgctcgc ttggggctgc cctcggcgcg gccccccctg gtgctaggct cggaactcgt
      661 ggcgactccg accaaggtca cggtccctgc gctccgcgct cgcaagggca agggtccgaa
      721 gattagcgtc gtcacggcgt acgacgtgac cttcgcgcgc ttgttcgagc aaggcggcgt
      781 cgatgtgctg ctcgtcggcg attcgctcgg gatggtcgtg caggggcagc cgacgacgct
      841 cggcgtcacc ctcgacgagg tcatctacca cggccgggcc gtggcgcgcg gcaccgaacg
      901 agcgcacctc gtcggcgact tgccgttcat gagctaccag acgggcgtcg tccccgcgct
      961 cgaagcggcg ggacgcatgc tgaaggaggg cggcttcgaa gcggtcaagc tcgaaggcgg
     1021 agagatttac gccgagcacg tgcaccggct cgtgagcgcc ggtattcccg tcatgggcca
     1081 tttgggcctc ttgccgcaat cggtgcacgc gatgggcggc ttcaaggtgc aaggaacgaa
     1141 cgccgccgcc gccgacaaga tcgtggccga cgccaagatc ctcgccgagg ccggtgtcta
     1201 cgccatggtg ctcgaggcga tccccgccga gctcgcgcgg cgcgtcaccc aagccgtgag
     1261 tgtcccgacg atcggtatcg gcgcggggcc gcactgcgac ggccaagtgc tcgttggcta
     1321 cgatttgctc ggtatgtact ccgaattcaa accgaagttc gtcaagcgct tcgccgaggc
     1381 cggcaagctc atcgtcgacg cgacgcgcgc gtacgtgagt gaggtcgaga acggcgaatt
     1441 cccgacgctc gcgcacgcct tcggtgcgcc caaagagctc ggcgctccgg ctgaacagac
     1501 gggagcgaag cccgt
//
LOCUS       DATIML010000554         3870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2999031, whole genome shotgun sequence.
ACCESSION   DATIML010000554 DATIML010000000
VERSION     DATIML010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3870
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2999031"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1261
                     /locus_tag="VLJ38_09545"
     CDS             <1..1261
                     /locus_tag="VLJ38_09545"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39803.1"
                     /translation="PRPGTAAPKDVLTAQLHEADRFVTLGADATPEPANVAPPNAATV
                     LIIDDEPDMRRYLAGILSDQYRVLKARDGAEGLELARRERPELVLVDLMMPVVNGWEV
                     CAALKREAEGAPKVVVITARTDEMAKIAALKQGADDFLSKPFSTLEVRTRLMNLALAS
                     ELERSLRLQNRALTDALTKLHVAEGKLVAREKMEAVVRLAGGILHEINNPLNFTLTAI
                     TVALDRYGGDAGLRSILEDVEAGMIRVRDIVSDLRSFATPGRVETRQSLLVRELVDEA
                     LKFTALELKDVQVHCEIPDGFRVYGARSELLQVLTNLLLNAASAVRMVSHERAPAIQI
                     VASGASGGASIRVRDNGTGIPEELIGKVFDPFLTTRDVGKGMGLGLSICRAVVTAHGG
                     DIRVRSRAGSFTEVEFDIPQPERGAAA"
     gene            1258..2514
                     /locus_tag="VLJ38_09550"
     CDS             1258..2514
                     /locus_tag="VLJ38_09550"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39804.1"
                     /translation="MTVSSDQAEFAVLYVDDEEQALKYFRMAFENDFRVLTATSADAG
                     WALIEAAQPPVGVLVTDQRMPEKSGTELLQRVRRMQPDIVRLLATAYSDLDAAIDAVN
                     SGAIYKYLVKPWDVRELRVTLRRAMDYFVLKRERDLLLREKLSTLQHLLVADRVRSLA
                     ILAEGLSSQIRNTMTALEAYVRLAREQAARSPAHNLSAEERWRNLEWETEDATGHLLK
                     LVQGIAAATIEPHHEFHDLVALGELVEASWVQARAQAPEGARLELDIDAELPPVGCCR
                     AMLARMFTSIFRTLLAAPLGATAGAPPPVRVVARQRSQVFGADGVAIQVVRPGFAETW
                     QKPLLFPAHDLAHEEEPADPLAAFFIVHHHAGTITLDRDDPLGSGFRITLPFSPASVV
                     RPDVGADAVKTLFANLPRWEALERGG"
     gene            2745..>3870
                     /locus_tag="VLJ38_09555"
     CDS             2745..>3870
                     /locus_tag="VLJ38_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HSU39805.1"
                     /translation="MDHWDAAPLEADIVVVGGGSAGSTAAIYAQRALLRGRVVLLEKA
                     HVKRSGAIAIGMDGLNNAIVPGHATPEQYVKEITMANDGIVNQRAVWEYAVNSYPMIE
                     ELDAWGVKFQKTSSGDFDVKKVHHQGSYVLPMPEGYDLKKILVRMLKRAGVTIVNRVM
                     ATRILLDGERVAGVLGFDTRSGAFQVIRAKAVILCCGASGRLGLPASGYLYGTYENPA
                     NAGDGYSLAYHAGAELTGIECFQINPLIKDYNGPACAYVTGPLGGHTVNARGHRFIES
                     DYWSGQMMLEFYRELHSENGPVYLKLDHLAPETLTEIERVLHRTERPSRGRFHAGRGT
                     DYAERLVEMHISEIGLCSGHSGSGVWVNERGETTVPGLYAA"
BASE COUNT          664 a         1290 c         1297 g          619 t
ORIGIN      
        1 gccacgtccc gggaccgccg cgccgaaaga cgtgctcacg gcccaacttc acgaggccga
       61 tcgcttcgtg acgctcggcg cagacgcgac gcccgagccg gccaacgtcg cgccccccaa
      121 tgccgcgacg gtgctcatca tcgacgacga gcccgacatg cgccgctacc tcgccggaat
      181 tctctcggac cagtaccgcg tgctcaaagc ccgtgacggc gccgaagggc tcgagctcgc
      241 gcggcgcgag cggcccgagc tcgtgctcgt ggacttgatg atgcccgtcg tgaacggctg
      301 ggaggtgtgc gcggccttga agcgcgaggc tgaaggcgca cccaaggtgg tcgtcatcac
      361 ggcccgcacc gacgagatgg ccaaaatagc ggcgctgaag cagggcgctg acgatttttt
      421 gagcaagccg ttcagcacgc tcgaggtgcg cacgcggctc atgaacctcg cgctagctag
      481 cgagctcgag cgcagcctcc ggctgcagaa tcgggcgctc accgacgcgc tcacgaagct
      541 ccacgtcgcc gaaggcaagc tcgtcgcgcg ggaaaagatg gaagccgtcg tgcgcctggc
      601 cggaggcatc ctgcacgaga tcaacaaccc cctcaatttc acgctgacgg ccatcacggt
      661 agcgctcgat cgctacggcg gagacgccgg gcttcgctcg attctcgagg acgtcgaggc
      721 cggtatgatt cgggtgcgcg acatcgtctc cgatctgcgc tccttcgcga cgccgggccg
      781 cgtcgaaaca cgccaatcgc tgctcgtgcg cgagctcgtc gacgaggcgc tcaagttcac
      841 ggcgctcgag ctcaaagacg tgcaggttca ctgcgaaatt cccgatggct tccgggtcta
      901 cggcgccaga tccgaactcc tgcaggtcct cacgaatttg ctcttgaacg cggcgagcgc
      961 cgtgcgcatg gtgagccacg aacgcgcgcc ggccatccag atcgtggcca gcggcgcgtc
     1021 cggcggcgct agcattcgcg tccgcgacaa tggaacgggg atccccgagg agctcattgg
     1081 caaggtgttc gatccatttc tcacgacacg cgacgtcggc aaaggcatgg gcctcgggct
     1141 cagtatttgc cgcgccgtcg tgacggcgca cgggggcgac atccgcgtgc ggagtcgcgc
     1201 gggcagcttc acggaagtag agttcgacat ccctcaaccg gaaagggggg ccgccgcgtg
     1261 acggtgagct ccgaccaagc agagtttgcg gttctgtacg tcgacgacga ggagcaggcg
     1321 ctcaagtact tccgcatggc gttcgagaac gacttccgcg tcttgacggc cacgagcgcc
     1381 gacgcgggct gggcgttgat cgaggcggcc caaccgccgg tcggcgtgct cgtcaccgat
     1441 cagcgcatgc ccgaaaagtc cggcacggag ctactccagc gcgtccggcg catgcagccg
     1501 gacatcgtgc gcttgctggc cacggcttac tccgatctcg acgcggccat cgacgccgtg
     1561 aacagcggcg caatctacaa atacctcgtc aaaccgtggg acgtccgcga gctccgcgtg
     1621 acgctgcgcc gcgctatgga ctatttcgtg ctcaagcgcg agcgcgacct gcttttgcgg
     1681 gagaagctca gcacgctgca gcacctgctc gtggccgacc gcgtgcgcag cctcgcgatc
     1741 ctcgccgagg gcctttcgag ccagatccgc aacaccatga cggcgctcga ggcgtacgtg
     1801 cgactggccc gcgaacaagc ggcgcgcagt cccgcgcaca acctttcggc cgaagagcgt
     1861 tggcgcaacc tcgagtggga aacggaagac gcgacgggtc atctgttgaa gctcgtgcaa
     1921 ggcatcgctg cggcgacgat cgagccgcac cacgaatttc acgatttggt cgcgctcggt
     1981 gagctcgtcg aggcaagctg ggtgcaagcg cgcgcgcagg cgccggaggg cgcgcgcctc
     2041 gagctcgata tcgacgcgga gctgccgccc gtcggctgtt gtcgcgcgat gctcgcgcgc
     2101 atgttcacct cgatctttcg cacgctgctt gcggcgccgc tcggcgctac tgcgggagcg
     2161 ccgccgcccg tgcgcgtcgt cgcgcgtcag cgcagccaag tgttcggggc ggacggcgta
     2221 gcgatccaag tcgtgcggcc gggctttgcg gaaacttggc agaagccact cttgtttccg
     2281 gcgcacgatc tcgcgcacga ggaagagccg gcggatccgc tcgccgcgtt cttcatcgtg
     2341 catcatcacg cggggaccat cacgctcgac cgcgacgatc cgctcggttc gggcttccgc
     2401 atcacgctgc cgttctcacc ggcgagcgtc gtgcggcccg acgtcggcgc ggacgccgtg
     2461 aagacgctgt tcgcgaactt gccgcgctgg gaagcgctcg aacgcggcgg ctgagcggcg
     2521 ccggatcccg ctgaacgggg agctccgagg aagccgcgcg cttgctgctc cgcgtgcacc
     2581 ggctgctgct cgactgctgc tggagcagca gtcgagaccg caatcgcgtc gactgaggca
     2641 tgttttctcg aggtttcgcg gcggcaccgc gacggctcgg ggctggcgcg cgccttgctg
     2701 gaggggaggg ctcggccgcc cgcacgcggc cggctcgaat cacgatggac cattgggacg
     2761 cggctccgct cgaagccgac atcgtcgtcg taggtggcgg cagcgccggg tcgacggccg
     2821 cgatctacgc gcaacgcgcc ttgctgcgcg ggcgcgtcgt gctgctcgag aaggcacacg
     2881 tcaaacgcag cggggcgatc gcgatcggca tggatgggct caacaacgcc atcgtgcccg
     2941 ggcatgcgac gcccgagcag tacgtcaagg aaatcacgat ggccaacgac ggcatcgtga
     3001 atcagcgcgc cgtctgggag tacgccgtca acagctaccc gatgatcgag gagctcgacg
     3061 cgtggggggt gaaattccag aagacgagct cgggcgattt cgacgtgaag aaggtgcatc
     3121 accagggcag ctacgtgctg ccgatgcccg aaggctatga tctcaagaag atcctcgtgc
     3181 gcatgctcaa gcgcgcgggc gtcacgatcg tcaatcgggt catggccacg cgcatcctgc
     3241 tcgacggcga gcgcgtcgcg ggggtgctcg gattcgacac gcggagcggc gcgttccagg
     3301 tcattcgcgc caaagccgtg attctctgct gcggcgcgtc gggccggctc ggtctgcccg
     3361 cctccggcta tctctacggc acctacgaga atcccgcgaa cgccggcgac ggctattcac
     3421 tcgcttacca tgcgggcgcc gagctcacgg gcatcgagtg cttccaaatc aatccgctga
     3481 tcaaggacta caacggtccg gcctgcgcgt acgtcacggg gccgctcggc ggtcatacgg
     3541 tgaacgctcg cggtcatcgc ttcatcgaga gcgattactg gagcggtcag atgatgctcg
     3601 agttttatcg cgagcttcac tccgaaaacg ggcccgttta cttgaagctc gaccacctgg
     3661 cgccggagac gctcaccgag atcgaacgcg tgctccatcg caccgagcga ccgagccgcg
     3721 ggcgcttcca cgccggccgg ggcaccgact acgccgagcg cctcgtcgag atgcacatct
     3781 ccgagatcgg cctctgcagc ggccacagcg gctcgggcgt ttgggtgaac gaacgtggag
     3841 agaccaccgt gcccggtctg tatgcggcgg
//
LOCUS       DATIML010000555         1904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5599458, whole genome shotgun sequence.
ACCESSION   DATIML010000555 DATIML010000000
VERSION     DATIML010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5599458"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1095)
                     /locus_tag="VLJ38_09560"
     CDS             complement(<1..1095)
                     /locus_tag="VLJ38_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HSU39806.1"
                     /translation="MSSLADALSTLSDRGLRRLLGARTFLRGLDYEKRKVVEDVDVNE
                     AQAVGKVRGSDPDPYAVTIRLGGEGITSHCTCPAFQKTGQHCKHVAALLITVRNRARS
                     ALPRNPATQGGGGPAHPPHAHQPMHSPQQHNGANGLDGSKASRRRDRRRRVQTQQPNT
                     PTNHYVPPAPDATARPTGIGAWLAPDGSTRQLQLEFRVHVRQGGLTVTVLDVDNRRPL
                     LPSDALGWQALTPTADRAALRVLSRFESGNPRHPAVDIRGEDAAELLPLVRERRVLLE
                     PALMQLRFVDEPLRPRFDLELVGAETIVAKVTFERSDGRRFQLTSGGWFEGAPGWHID
                     TSDGVARPLDPRVSPAALRRLLRSPTIAEPA"
BASE COUNT          278 a          625 c          725 g          276 t
ORIGIN      
        1 agcgggttcg gcgatggtgg ggcttctgag caagcggcgc agggcggcgg gtgacacgcg
       61 cgggtcgagc gggcgcgcca cgccgtcgct cgtgtcgatg tgccagccgg gagcgccctc
      121 gaaccagccg ccgctcgtga gctggaagcg acggccgtcg ctgcgctcga acgtcacctt
      181 ggcgacgatc gtttcggcgc cgacgagctc gagatcgaaa cgcggcctga gcggctcgtc
      241 gacgaagcgg agctgcatca gcgccggctc gagcagcacg cggcgctcgc gcacgagcgg
      301 caggagctcg gcggcgtctt cgccccggat gtcgacggcc gggtgacgcg gattgccgct
      361 ctcgaagcgt gaaagcacgc ggagcgccgc gcgatcggcc gtcggggtga gcgcttgcca
      421 gccgagcgcg tcgctcggca agagtggacg ccggttatcg acgtcgagca ccgtgacggt
      481 gagcccgcct tggcgcacgt ggacgcggaa ttcgagctgg agctggcgcg tgctgccgtc
      541 gggcgcgagc caggccccga tccccgtggg gcgtgccgtg gcgtcgggtg cgggcgggac
      601 gtagtgattc gtgggcgtgt tgggttgttg cgtttgaacg cggcggcggc gatcgcggcg
      661 gcggcttgcc ttgctgccgt cgagaccgtt ggcgccgttg tgctgttggg gagagtgcat
      721 gggttggtgc gcgtgcggcg gatgcgcggg gccgccgccg ccctgcgtgg ccgggttgcg
      781 cggcagcgcc gagcgcgcgc ggttgcgcac cgtgatgagc agcgcggcga catgcttgca
      841 gtgctgtccc gtcttctgga atgcgggaca cgtgcagtgc gaagtgatgc cttcgccgcc
      901 gaggcgaatg gtgaccgcgt agggatcggg gtcagagccg cggaccttgc ccacggcctg
      961 cgcctcgttc acgtcgacgt cttcgacgac cttgcgcttc tcgtagtcga ggccgcgcag
     1021 gaacgtgcgg gcccccagca agcggcgcag gccgcgatcc gagagcgtag aaagagcgtc
     1081 agctagtgag gacaaggctc gttgccggtc gatgaatgcc gagccccggc gggcggcgtt
     1141 ttcagaggaa aaaggttctt gcaaggagag cgaatgaagc agcgatggcc gctgcaatgc
     1201 aggctgccgg ttcgacggcg ctgcccagga tttcggctaa cgcgctaccg gtgaccgagg
     1261 ccgcatgggt gacgggatct ccctcgggac ggttggcgcg acgcgcgccg gccaaaaccg
     1321 cacgcgctcc gtccaccgcg agcgcgaccc ccagggcagt caccgcggcc cccgcaacga
     1381 acgctgcgag agtcccggcc gccagccgag ggcctgcatc tcgatacacg agccggagag
     1441 cgatgccaag cagaaccggt cccaaaagga ccgaggcagc tcccgacgcc gcgcctccga
     1501 ttcctagccg ccctgcgagc tcttcgcaag tgcgataact cggcacgcgg tcctccgcgg
     1561 gggattctgg gctcggcctt ccgagctgtc gctcgacttc gaccgcaagt tcgcgcgctg
     1621 cgcgggccga acggcgtgcc gcccaaccgg ccgcgaaaag gacgagaccg acgccgaaaa
     1681 gcgtcgccca gccatcactg ttcgtttcgg tccccggcgc gggtgcggga gtgagggtca
     1741 gtgcggccgc gagtgccgcg agcccctggg cgagcgtgag ggcgccatgg ccgaccgcgc
     1801 tcgggagctt gatcgaatcg gcgacacgct gcaggcgccc cgccgtttcg cccggggcac
     1861 ccgccatctg cgcgacggcc cgcgcggttt cgagcaggcc cgcg
//
LOCUS       DATIML010000556         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4735543, whole genome shotgun sequence.
ACCESSION   DATIML010000556 DATIML010000000
VERSION     DATIML010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4735543"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..794
                     /locus_tag="VLJ38_09565"
     CDS             <1..794
                     /locus_tag="VLJ38_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HSU39807.1"
                     /translation="IGLLGDASSTQRSTIATSLDHTNPNGSTPTNDAYDYAYSNGMQA
                     SKLTGNRFMLLITDGAPTLKKGCQGGGGPDNPQPTQPIIDDIHAARQAGVRTFIIGSP
                     GSESVSNGTTNVDVRPWLALAAVEGGTAPEGCSVLASTNGGGTDWCHIDLSQSSDFAG
                     ALNAALSRILGLITSCTFDVPVTAPDGKVVQRDEVNVIYTPGSGSGDVLVGRDDSPDC
                     QNGWQFDSDGRVVLCPQTCATAQNDPAGKIELLFGCDSVSVGPVR"
     gene            complement(787..1452)
                     /gene="radC"
                     /locus_tag="VLJ38_09570"
     CDS             complement(787..1452)
                     /gene="radC"
                     /locus_tag="VLJ38_09570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HSU39808.1"
                     /translation="MLDLRERTLLGELDRLSNADLLALVLGTGSAGESVTNLASDLLE
                     AAGGLDGLVRLAPHGIAARRGLGPAKAARVTAALELGRRAAVSGMAVRTTLLGSFDDV
                     VSWARPRFASLDHEEVWLLGLDGRNALKAARRIAQGGQHGCALTTRDVLGPALRDAVS
                     AIVLVHNHPSGDPHPSTEDVGMTRALAEACHVVGVPLLDHVIVARGGATSLLEVGALE
                     PLT"
     gene            1512..>1782
                     /locus_tag="VLJ38_09575"
     CDS             1512..>1782
                     /locus_tag="VLJ38_09575"
                     /inference="COORDINATES: protein motif:HMM:NF023855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching enzyme N-terminal
                     domain-containing protein"
                     /protein_id="HSU39809.1"
                     /translation="MGVCARGGRWRRRARSGAGSWRRALRSELRVTSPGWRSVERDSE
                     WLETDGLGGFASGTTSGVRTRRYHALLLAAAKPPADRRVLVQGFVA"
BASE COUNT          289 a          612 c          628 g          253 t
ORIGIN      
        1 cgatcggtct gctcggcgat gcgagctcga cgcagcgcag cacgatcgcg acctcgctcg
       61 atcatacgaa cccgaacggc tcgacaccca cgaacgacgc ctacgactac gcctactcga
      121 acggcatgca ggcctcgaag ctgacgggca accgcttcat gctgctcatc accgacgggg
      181 cgccgactct caaaaaaggc tgtcaaggcg gcggcgggcc ggacaacccg cagccgacgc
      241 agccgatcat cgacgacatc cacgcggcgc gccaagccgg cgtgcggacc ttcatcatcg
      301 gctcgcccgg cagcgagagc gtcagcaacg gcaccacgaa cgtggacgtg cggccgtggc
      361 tcgcgctcgc cgccgtcgaa ggcggcaccg cgcctgaagg ttgctccgtg ctcgcgtcga
      421 cgaacggcgg tgggaccgac tggtgtcaca tcgatctatc gcagagctcg gacttcgcgg
      481 gcgcgctgaa cgccgcgctt tcgcgcatcc tcgggctcat cacgtcctgc acgttcgacg
      541 tgccggtgac ggccccggac ggcaaggtcg tgcaacgtga cgaagtgaac gtcatctaca
      601 cgccgggctc cggcagcggc gacgtgctcg tcgggcgcga cgactcgccc gactgccaaa
      661 acgggtggca attcgatagc gacggccgcg tcgtgctctg tccgcaaacc tgcgcgaccg
      721 cgcaaaatga tccggctggc aaaatcgagc tgctgttcgg ttgcgacagc gtgagcgtcg
      781 gtccggtcag gtgagcggct cgagcgcgcc gacctcgagc agcgacgtgg ctccgccgcg
      841 ggcgacgatg acgtgatcga gcagcggcac gcccacgacg tggcacgcct ccgcgagggc
      901 gcgcgtcatc ccgacgtctt cggtgctcgg gtgcggatcg ccgctcggat gattgtgcac
      961 gagcacgatg gcgctcacgg cgtcgcgcag cgcgggtccg agcacgtcac gcgtcgtgag
     1021 cgcgcagccg tgttggccgc cttgagcgat gcggcgcgcc gctttgagcg cgttacgacc
     1081 gtcgagcccg agtagccaca cctcctcgtg atcgaggctc gcgaagcggg ggcgcgccca
     1141 agagaccacg tcgtcgaagg agccgagcag cgtcgtacgc acggccatgc cgctcacggc
     1201 cgcacgccgg ccgagctcga gcgccgcggt gacacgcgcg gccttggcgg gaccgagccc
     1261 gcgccgtgcg gcgatgccgt gcggcgcgag gcgtaccaag ccgtcgaggc cgccagccgc
     1321 ttcgagcaga tcgctcgcga gattggtgac gctttctccg gcactgcccg tgccgagcac
     1381 gagcgcgagc agatcggcat tgctgagcct gtcgagctca ccgagcaggg tgcgttcacg
     1441 aagatcgagc atcgtggcac ggagaagtgc acgctgcgtg ccagtccaaa gcgcggcctg
     1501 agctccctgc gatgggagtt tgcgcgcgtg gcggccgctg gcgacgccgg gcgcggtcgg
     1561 gcgctgggtc atggcggcga gcgctccgca gcgagcttcg tgtaacatcc cccgggtggc
     1621 gaagcgttga gcgcgacagc gagtggctcg agaccgacgg cttgggcgga ttcgcgagcg
     1681 ggacgacctc gggcgtgcgc acgcggcgct atcacgcgct cctacttgcc gccgcaaagc
     1741 cgcctgccga taggcgtgtg ctcgtgcagg gcttcgtcgc gc
//
LOCUS       DATIML010000557         3927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_692879, whole genome shotgun sequence.
ACCESSION   DATIML010000557 DATIML010000000
VERSION     DATIML010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3927
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692879"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1403
                     /locus_tag="VLJ38_09580"
     CDS             <1..1403
                     /locus_tag="VLJ38_09580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39810.1"
                     /translation="LRGRQRAFGAAVLVFARVPALLNWLFTGVTTPTTALVKWLPLSP
                     YYASFGKLWQAVLGNVSLLFGTLLNGEVWSAVFLPQGSAIVLWPALPALIWLGFRRGV
                     KPRALLVAWVGLGMLLPATYDSFLWNRLRYLWPFMAAWFVGVAAVADVVGLVVARYAP
                     GFERVRLLASGAVLGGLLSHLGWTLDDLATSANAIRTQQAELGHWAKDALPAGAVIGV
                     NDTGAIGYFSERRVFDVVGLTTRGEARYWVAGSGSRFEHYERLGAAALPTHFIVYPEW
                     FALPGLLGEYRTARHVPGATILGGETMIAYDADYKALGSGARPLGPARDDTLLADELD
                     VADLESESAHHYELFDASSLEDVALEQDGVMDGARRNRERERFDLRLPPAGTLVLRVE
                     GEGAGELGVRTGRGVLGVVPLAAGTWREFELALPASGDNEPHEVQVEARGARFGSLHY
                     WSYRRGPLAAAASPGP"
     gene            1443..2393
                     /locus_tag="VLJ38_09585"
     CDS             1443..2393
                     /locus_tag="VLJ38_09585"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSU39811.1"
                     /translation="MRKRTLGATGLEVSELALGTWGLSGEGYGPVEEAEQDAVIDRAI
                     ALGVTLFETSDSYAGGEMERRIGFRARIGRTPPPIVVATKIGTDSTASPARKRFDAVW
                     LKEAAERSRERLKRERIDILLLHNPSVATLARGELKDTLTSICDSGLARTWGVSVGTA
                     EVASEAVSIGAPVIELPYNTFHRREMVRIAADVKEKNIGILARSVLSYGLLCGEWPTG
                     HTFQYGDHRKERWTQAELKRRIVQLNALRPSVLQDVTSLRAVALRYVLSDALVSSVVL
                     GPRKAAQLDQLLRDSGKEPYLPEGGRAALENRLRAVGVDV"
     gene            2390..3211
                     /locus_tag="VLJ38_09590"
     CDS             2390..3211
                     /locus_tag="VLJ38_09590"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HSU39812.1"
                     /translation="MSRAELEVLVRIAAEAAVLVAEVYGKPFEVEYKGPRDPVTIADR
                     RANELIVERLTREFPGMPIVAEESDPERFAGFRDAPDVFFVDPVDGTNEFIEHHPEFV
                     VMIGLLQGKTVTHGVIHAPVSGTAWAGAVGFGAERIEASGERAPIAVTRVAELAHATI
                     VSSRSHRSARLERALDSLGVKEITSMGSAGLKGAAVARGSVDAHVAPHNGGKRWDAAA
                     VDALVVAAGGLVTDAWGDPIDYRGLSLTNDRGIVASNGLIHGELLERLHRHRTEG"
     gene            3375..>3927
                     /locus_tag="VLJ38_09595"
     CDS             3375..>3927
                     /locus_tag="VLJ38_09595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39813.1"
                     /translation="MRTSRAIASLISSLMLNSSLTAAVLITPALVGCKDEGQPEYWVE
                     KLDDPSWRAKSVNRLVQFYEDTLSRKNNDPKAPEVVELVNKTVEPLTKLYVDQYDNLD
                     SKTRVALIKLLADYRDKRTEPALKKAFDQFVKLPKTSRDETDVKWAARAEEDLQIESL
                     QLPMLEAFRKLRTSSMLGGVAYRD"
BASE COUNT          616 a         1328 c         1345 g          638 t
ORIGIN      
        1 gcttgcgcgg ccggcagcgc gcgttcggcg ccgcggtgct cgtcttcgcg cgcgtgccag
       61 cgttgctcaa ttggctcttc accggcgtca cgacaccgac caccgcgctc gtgaagtggc
      121 tgccgctgag cccttactac gcgtcgttcg gcaagctctg gcaggcggtg ctcggcaacg
      181 tgtcgctcct gttcggcacg ctgttgaacg gcgaggtgtg gagcgccgtg ttcttgccac
      241 agggctctgc gattgtgctc tggccggcgc tacccgcgct gatctggctc ggttttcggc
      301 gcggagtgaa gccgcgcgcc ctgctcgtcg cctgggtcgg cctcggcatg ctgctgccgg
      361 cgacgtacga cagcttcctc tggaatcggc tgcgttacct gtggccgttc atggccgcct
      421 ggttcgtcgg cgtggctgcc gtcgccgacg tggttggtct cgtggtggcg cgctacgcgc
      481 cggggttcga gcgcgtgcgc ttgctcgctt cgggtgccgt cctcgggggg ctcttgagtc
      541 atctcggctg gacgctcgac gacctcgcga cgagcgcgaa cgccatccgg acgcagcaag
      601 ccgagctcgg gcactgggcg aaggacgcgc tgcccgctgg cgccgtgatc ggcgtgaacg
      661 acacgggcgc gatcggctat ttctccgaac gccgagtctt cgacgtggtc gggctcacga
      721 cccgcggcga agcgcgctac tgggtggccg gctcgggctc gcgcttcgag cactacgagc
      781 ggctcggcgc ggcggcgcta ccgacgcatt tcatcgtcta tcccgagtgg ttcgcgctgc
      841 cgggcctgct cggcgagtac cggaccgctc gtcacgttcc cggcgcgacg attctcggcg
      901 gcgaaaccat gatcgcctac gacgccgact acaaggcgct cgggtcgggc gcccgccccc
      961 tcgggccggc ccgcgacgac acgctcctcg ccgacgagct cgacgtggcc gatctcgaga
     1021 gcgagagcgc gcaccattac gagctcttcg acgcgagctc gctcgaagac gtcgcgctcg
     1081 agcaggacgg cgtgatggac ggcgcgcgcc gcaatcgcga gcgcgaacgc ttcgaccttc
     1141 gcctgcctcc tgcgggcacg ctcgtgctgc gggtcgaagg cgaaggtgcg ggcgagctcg
     1201 gcgtgcgcac tgggaggggc gtgctcggag tcgtgccgct cgcggccggt acttggcgcg
     1261 aattcgagct cgctttgccc gcgagtggtg acaacgagcc acacgaggtc caggtcgaag
     1321 cacgtggggc gcgctttggc tcccttcatt attggagcta tcgccgcggc ccgctcgccg
     1381 cggccgcctc gccggggccg tgacgggtcg ctgcgtgccg atggcgtggt atacgccgct
     1441 cgatgcgcaa acggacgctc ggcgcaaccg gcctcgaagt gagtgagctt gcgctcggca
     1501 cctggggtct ctccggcgaa ggctacggcc ccgtcgagga agccgagcag gacgccgtga
     1561 tcgaccgcgc catcgcgctc ggtgtcacgc tcttcgaaac ctccgactcc tacgccggcg
     1621 gcgagatgga gcgccggatc gggtttcgag cgcgcatcgg ccgcacgccg ccgcccatcg
     1681 tggtcgcgac caagatcggc acggacagca ctgcgagccc cgcgcgcaaa cgtttcgacg
     1741 cggtctggct caaggaagcg gccgaacgct cgcgcgagcg gctgaagcgc gaacggatcg
     1801 acatcctcct gctccacaat ccctcggtcg caacgctcgc gcgcggcgag ctcaaggaca
     1861 cgctgacctc gatctgtgac tccggtctcg cgcgcacgtg gggcgtgagc gtcgggacgg
     1921 ccgaagtcgc gagcgaagcc gtgtcgatcg gcgcgcccgt gatcgagctc ccgtacaaca
     1981 cctttcaccg ccgcgagatg gttcgcatcg ccgccgacgt gaaggagaaa aacatcggga
     2041 tcctcgcgcg ttcggtgttg agctacgggc tcttgtgcgg cgagtggccg acgggacaca
     2101 ccttccagta cggcgatcac agaaaagagc gctggacgca ggccgagctc aagcgacgca
     2161 tcgtgcagct caacgctctg cgtccgagcg tcctccagga cgtgacgagc ctgcgcgccg
     2221 tcgccctgcg ctacgtgctg tcggacgcgc tcgtgagcag cgtcgtgctc ggcccgcgca
     2281 aggccgcgca actcgatcaa ttgctgcgcg actcgggcaa ggagccgtac ctgcccgagg
     2341 gtggccgcgc cgcgctcgag aatcgtctgc gcgccgtcgg ggtggacgtg tgagccgcgc
     2401 ggagctcgag gtgctggtgc gtatcgcggc cgaagcagcc gtgctcgtcg ccgaggtgta
     2461 tggcaagccg ttcgaggtcg aatacaaggg accgcgcgat ccggtgacga tcgccgatcg
     2521 gcgcgcgaac gagctcatcg tggagcggct gacgcgcgag tttccgggga tgcccatcgt
     2581 cgccgaggag agcgatcccg agcgcttcgc cgggttccgc gacgcgcccg acgtgttttt
     2641 cgtcgatccg gtggacggga ccaacgagtt catcgagcac caccccgagt tcgtcgtgat
     2701 gatcgggctc ttgcagggca agacggtgac gcacggcgtg attcacgccc cggtctcggg
     2761 caccgcgtgg gccggcgcgg tgggcttcgg cgccgaacgc atcgaagcgt cgggagagcg
     2821 cgcgcccatc gccgtcacgc gcgtcgccga gctcgcgcac gcgacgatcg tttcgtcacg
     2881 ctcgcaccga agcgcccgtc tcgagcgcgc cctcgactcg ctcggcgtga aggaaatcac
     2941 gtcgatgggc agcgcgggtc tcaaaggagc ggccgtcgcg cgcggcagcg tggacgcgca
     3001 cgtcgcgccg cacaacggcg gcaagcgctg ggacgccgcc gcggtcgatg cgctcgtcgt
     3061 cgcggccggc ggcctggtga cggacgcctg gggtgacccc atcgactacc gcggcctctc
     3121 cctcacgaac gatcgcggca tcgtcgcgag caacgggctg attcacggcg agttactcga
     3181 gagactgcac cggcatcgga ccgagggctg agcgggcccc gaagcacaca tccacctacc
     3241 tagaccggac ctcgtttggg tacttccaag actcaagcgt cgttgcagtt ccgttgacag
     3301 ccgaaggacg ggcggcctag cttgaaggcc cctcggaaat ccagggtttt tcggggaatt
     3361 tagaaggagc tcccatgcga acctcgcgcg ccatcgcgtc gctcatcagc tcgttgatgc
     3421 tcaactcgag cctcaccgca gcggtcctca tcacgccggc gctcgttggc tgcaaggacg
     3481 aaggccagcc cgagtactgg gtcgagaaac tcgacgaccc ttcgtggcgg gcgaaatccg
     3541 tcaaccgcct cgtgcagttc tatgaggaca cgctttcccg caagaacaac gatccgaagg
     3601 cgcccgaggt ggtcgagctg gtcaacaaga ccgtcgaacc tctcaccaag ctctacgtcg
     3661 atcagtacga caacctcgac tcgaagacgc gcgttgcgct catcaagctg ctcgccgatt
     3721 accgcgacaa gcgcaccgag cccgcgctga agaaagcttt cgaccagttc gtcaaactcc
     3781 cgaaaacgag ccgagacgaa acggacgtca aatgggcggc gcgcgccgag gaggatctcc
     3841 agatcgagag cctgcagctg ccgatgctcg aggcgtttcg taagctgcgc acgagctcca
     3901 tgctcggcgg cgtcgcgtat cgcgaca
//
LOCUS       DATIML010000558         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1270738, whole genome shotgun sequence.
ACCESSION   DATIML010000558 DATIML010000000
VERSION     DATIML010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270738"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..>1851
                     /locus_tag="VLJ38_09600"
     CDS             207..>1851
                     /locus_tag="VLJ38_09600"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSU39814.1"
                     /translation="MGPAAAPARKQPELVLATAGLVAIVGLFIAATSAYLSAVTWIDH
                     TLEVQRVLSHWLIEVRSSETAGRRFVDSGRPADLDDFSRAVSSQLSTREKLRGVLADN
                     PAQTAAFARAARDAEAALEPYRELVALARAGHHREAIDRLVAGEAEYNQAANRFEADC
                     DAMQAHEAALLVMRSEQARRRVLTALAGGSALGVSAFALLIAVWTSRARREGLLRKAA
                     SEARHRLQALSDVAVMLSEARNVPEVARAVVEVGMAAFAADVCTLYLLDESGTTLELV
                     GDRGVAPGVLERIRRISSSSGNPEAFRTLESGEPLWAESDADYQRLFPKLRHVTSDGP
                     RAQAFWSMPLIVENRPVGLLGMGFYGPRRFSDDDKLLADTLGKHCGQALLRARRLESE
                     EEARRWFTTTLRSIGDAVIATDPSGVVTFMNPVAEALTGWTEPEARGRPLDEVFQIFS
                     ERTRAAVESPVARVLREGAIVGLANHTILRSRRGGELPIDDSGAPIRNEQGELIGVVM
                     VFRDVSRDKADRARKEFLSKAGEALVASLDYQATLGTVAR"
BASE COUNT          300 a          627 c          630 g          294 t
ORIGIN      
        1 tatttcgtga cgcatggcgc cggtccgttg agcgtcgacg cccttgtggc caaaaatcgg
       61 cggcagcccg gtcgacgccg tgctcgcctc gaagcgacga ctcacccgtg agcgcacgcg
      121 cgtgtcattt cgccacgcgc ggccctcccg tacaaaactt gacgggcgac ttgcaccaac
      181 cgcgcggatg agagaaaccg aagagattgg gtcccgcggc cgcgcccgca cgcaagcaac
      241 ctgagctcgt cctagcgacg gccgggctcg ttgcgatcgt cggtctattc atcgcggcga
      301 ccagcgctta cctgtcggcg gtcacgtgga tcgaccacac gctcgaggtc caacgggttc
      361 tcagccattg gttgatcgaa gtgcgttcgt cggaaacagc cgggcgacgc ttcgtcgact
      421 cgggacggcc tgcggacctc gacgattttt cccgcgcggt ctcgagtcag ctctcgacgc
      481 gcgagaagct tcgcggcgtc ctcgccgata atcccgcgca gacggccgca ttcgcgcgcg
      541 cggcgcgcga tgcggaagcc gccctcgagc cgtaccgtga gctcgtcgcg ctcgctagag
      601 cgggccacca ccgggaagcg atcgatcgcc tcgtcgcggg cgaggcggag tacaatcagg
      661 cagccaaccg cttcgaggcc gattgcgacg ccatgcaggc gcacgaagcc gccttgctcg
      721 tgatgcgcag cgagcaggcg cggcgtcggg tgctgacagc gcttgccggc ggctctgcgc
      781 tcggggtgag cgcgttcgcg ctgctcatcg ccgtttggac gtcccgagcc aggcgcgagg
      841 ggctgctgcg aaaagcggcg agcgaagcgc gccaccgact ccaggcgctg tccgacgttg
      901 cggtcatgct ctcggaagct cggaacgtgc ccgaggtcgc gcgcgcagtg gtcgaggtcg
      961 gcatggccgc cttcgcagcc gacgtatgca cgctctactt gctcgacgaa agcggtacga
     1021 cgctcgagct cgtcggcgac cgcggcgtcg cccccggcgt gctcgagcgc attcgccgaa
     1081 tttcgagcag ctccggcaac ccggaggcgt tccgcacctt ggaaagcggc gagccgcttt
     1141 gggccgaaag tgacgccgac taccagcggc tgtttccgaa gctcaggcac gtgacgtccg
     1201 acgggccgcg cgcgcaagcc ttctggagca tgccgctcat cgtggaaaac cgccccgtcg
     1261 gcctgctcgg tatgggcttc tacggcccgc gtcgcttctc ggacgacgat aagctgctcg
     1321 ccgacacgct gggcaagcat tgcgggcagg cgctgctccg cgcgcgccgc ctcgaaagcg
     1381 aagaggaagc acggcgctgg ttcacgacga cgctccgcag catcggcgac gccgtgatcg
     1441 cgaccgatcc gagcggtgtc gtcactttca tgaaccccgt tgccgaggcg ctcacgggct
     1501 ggactgaacc cgaagcgcgc ggcaggccgc tcgatgaagt ctttcaaatc ttttcggagc
     1561 ggacgcgcgc ggccgtcgag agccccgtcg cgcgcgtctt acgcgagggg gcgatcgtcg
     1621 gcctcgccaa ccatacgatc ttgcgttcgc gccgcggtgg agagctgccc atcgacgaca
     1681 gcggcgcgcc gatcaggaac gagcaaggcg agctcatcgg cgtcgtgatg gtgtttcgcg
     1741 acgtatcgcg cgacaaggcg gatcgcgccc gcaaggagtt cttgagcaag gcaggcgagg
     1801 cgctcgtggc gtcgctcgac tatcaagcga cgctcgggac cgtcgcgcgc t
//
LOCUS       DATIML010000559         1913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5024481, whole genome shotgun sequence.
ACCESSION   DATIML010000559 DATIML010000000
VERSION     DATIML010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5024481"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..802)
                     /locus_tag="VLJ38_09605"
     CDS             complement(<1..802)
                     /locus_tag="VLJ38_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39815.1"
                     /translation="MVRRLAARVSFLAGVALLVVAAVHVGADQGAPAEPLPAALPHAP
                     AAAPHASPRAEGEEAACQDDALVVPSGHPVGLSCAQARSLLGEIRTRFAEDLPTPAPG
                     AFAESLTSWLDPHGLWSAAADAPTGPLIASEAEALIDELGAGANADRPCTAAGEIGAA
                     LEHWVGDLRATFDAASAGAPALSTPSASELALASAFEDGDVTVPAQTLAAELGRRVGS
                     VERSFGASLEPFVRASRERFLPGLDAREWENVVLAAAVRSYVSVVDPHG"
     gene            complement(822..>1913)
                     /locus_tag="VLJ38_09610"
     CDS             complement(822..>1913)
                     /locus_tag="VLJ38_09610"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU39816.1"
                     /translation="GGATFLGLIEGLADATSSLLKLASGYLGDRPGRKKPLVMVGYGL
                     ATFVRPFVALATAPWHVLVVRVTDRIGKGVRSSPRDALIAAAVPHEDAGRAFGFHNAM
                     DHAGAVIGPVTATLLLHFGVPLRTVFWLTALPGLLALAAAAVVREPAAAREPADAATT
                     EPDVSVQLAAAPVSPTLPGPLKTYCAILALFALGGSSDAFLLLRARDLGVAVALLPLL
                     WTLFNLSKLVSSYFAGSFSDRVPRVFVIVTGWVIYAFTYLAFAFAREAWHAWALFFVY
                     GAYYGLTEPVEKALVRDLTSSELRSRAYGLYNFVLGACALPAGLITGWLWDHLSPFVA
                     LATGAALAAAASLLLLAWARRGAVVRARA"
BASE COUNT          344 a          662 c          690 g          217 t
ORIGIN      
        1 cgccgtgcgg atcgaccacg ctcacgtagc tgcgcacggc cgccgcgagc acgacgttct
       61 cccactcgcg cgcgtcgagg cccggcagga agcgctcacg cgaagcgcgc acgaagggct
      121 cgagcgacgc gccgaacgag cgttcgacgc tcccgacccg ccgtccgagc tctgcggcga
      181 gcgtttgcgc cggcaccgtc acgtcgccgt cctcgaacgc cgaagcgagc gcgagctcgg
      241 aggcgctcgg cgtcgaaagc gcgggcgcgc cggcgctcgc cgcatcgaac gtcgcgcgca
      301 agtcgccgac ccagtgctcg agcgcggcgc cgatttcgcc cgctgcggtg cacggtcggt
      361 cagcgttcgc gccggcgccg agctcgtcga tcaacgcttc cgcctcactc gcgatgagcg
      421 ggcccgtagg tgcgtcggcc gcagccgacc aaaggccgtg cggatcgagc cagctcgtta
      481 ggctctccgc aaaggcaccg ggcgcgggcg tcggcaaatc ctcggcgaag cgcgtcctga
      541 tttcgccgag cagcgagcgc gcttgcgcgc agctgagccc gacgggatgt ccgctcggca
      601 cgacgagcgc gtcgtcctga cacgctgctt cttccccttc ggcgcgcggg gaagcatggg
      661 gtgcggcggc cggcgcatgc ggcagagcag cggggagcgg ctcagcgggc gcgccctggt
      721 cggcaccgac gtgcacggcg gcgacgacga gcaacgctac gccggccaag aacgagacgc
      781 gcgcggcgag ccgtcgaacc atgggtcagg ccgatcgtag cttacgcccg cgcccgcaca
      841 acggctccgc gccgcgccca agcgagcagc aacaaggaag cggcggccgc gagcgccgcg
      901 cccgtggcca gggcgacgaa cgggctcaaa tggtcccaaa gccagccggt gatgaggccg
      961 gccggcagcg cacaggcgcc gagcacgaaa ttatagagcc cataggcacg cgacctgagc
     1021 tcgctgctcg tgaggtcgcg cacgagcgcc ttttccaccg gctccgtgag gccgtagtac
     1081 gcgccgtaga cgaagaacag ggcccaggca tgccacgcct cccgcgcgaa cgcgaacgcg
     1141 agatacgtga aggcgtagat gacccagccc gtgacgatca cgaacacgcg cggtacgcga
     1201 tccgagaacg agccagcgaa atacgagctc acgagcttgg agagattgaa gagcgtccaa
     1261 agcagcggca agagcgccac cgcaacgccg aggtcgcgcg cccgcagcaa gagaaaggcg
     1321 tctgaagagc cgcccagcgc gaagagggcc aggatggcgc agtaggtttt gagcgggcca
     1381 ggcagagtag gcgagaccgg tgcggcggcg agctgaaccg aaacgtcggg ttcggtagtg
     1441 gcagcgtcgg cgggttcgcg ggctgcggcc ggctcgcgca cgacggccgc tgccgcgagt
     1501 gccaaaaggc ccggcagcgc cgtgagccaa aagacggtgc gcagcggcac cccgaaatgg
     1561 agcagcagcg tcgccgtgac cgggccgatc acggcgccgg cgtgatccat ggcgttgtga
     1621 aagccgaagg cgcggccggc gtcttcgtgc gggaccgccg ccgcgatcag cgcatcgcgc
     1681 ggcgacgagc gcacgccttt gccgatgcgg tccgtcacgc gcacgacgag cacgtgccag
     1741 ggcgctgtcg cgagcgcgac gaacggccgc acgaacgtgg cgagcccgta gccgaccatg
     1801 acgagcggct tcttcctgcc cggccgatcg ccgaggtaac ccgatgcaag cttgagcaaa
     1861 ctcgacgtag cgtctgcgag tccttcgatg agtccgagga acgtggcgcc gcc
//
LOCUS       DATIML010000560         3728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4736484, whole genome shotgun sequence.
ACCESSION   DATIML010000560 DATIML010000000
VERSION     DATIML010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3728
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4736484"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..897
                     /locus_tag="VLJ38_09615"
     CDS             <1..897
                     /locus_tag="VLJ38_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HSU39817.1"
                     /translation="RLNNPEIQSLVDGWVRPALEQWLNQTRTVAEQIVARIILSARAR
                     EASRAASAQVTRRSATNGRLTLPGKLSDCLSNARESTELFIVEGDSAGGSAKQGRDRN
                     FQAILPLRGKVLNTEGLATGKVLENKELADLVTALGCGVGTGFDLSRLRYQRIVLLAD
                     ADSDGHHITTLLLTFLYRHLPELIKGGRVFIAMPPLYRIDIGQATYWAADDPDRDRLL
                     KEHVKGNAKPEITRFKGLGEMMPKVLWETTLSPKTRRLLRVGIADALETDRIVGELMG
                     KDPSARFRFIMDRADEASDLDV"
     gene            1075..>3728
                     /gene="bamA"
                     /locus_tag="VLJ38_09620"
     CDS             1075..>3728
                     /gene="bamA"
                     /locus_tag="VLJ38_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HSU39818.1"
                     /translation="MSAGRLLAQGTPPAGTAASVQPAKTKAPKHTATKKGRTKATPAK
                     PADDDASDDETSAGDPAPSAAAPSAKGDTAKGAPPAKGTTTPSGAATPSGAATPSGAA
                     ASGDKGAAPTEEETPSPSTAIPPGEAELAEGMTIRAIEVAGNRRVTAEDVRTYLKERV
                     GMSFSAEALTEDVRELYGSGFFDDIEVDLVRGDDGVRLRFLVRERPSIAKVSFEGNQE
                     IDNDDLKEGVEIKEATVLSQPAIRRSVQKIRDMYAEKGFFLAEATSSIIPMRDGEVEV
                     KFKITEHDQVSVRRVTFIGNEHLSTEELRSLMFTGNSGFFLFGSGGPFRQDAFERDVA
                     VLSALYYDRGFLSVSIGTPRIMLTPDRSGIEVSITIDEGPRFRIRQLRVYERGADGKE
                     SEPIDGRRNLRMMVRAKSGDWFNRAELLEDLQAVRTLYRDHGYASVDATPQTNLDPAT
                     HEVDVIVPVERGPLVHFDRIEIRGNTKTRDKVIRRELEITEGDLFSESKLERSRKRIN
                     ALGYFERVDVSTEQGATPDRMNVYIEVGERPTGTFQVGAGFSSIENFILTAQVQQANL
                     FGNGQSLSLQIQWSGLRQLANIRFFEPYLLDSPFSASIDLYDQLRAYVDFSQSSIGGA
                     LTIGYPLLEPELYAYLTYTAEQDQVSTQQTSTLLGTSTRVSVFRSLPLANLFNDGFTS
                     SIRPSLTYDTRDNRLFPTAGVYVSASTELASSALGSTNEFLRHRVTGRFYYPLGKGFV
                     LKLNTEFGLVTSPSAEGVPIFARFFLGGIFDVRGFLYRSIGPRVGLTASTDPNSVPIP
                     NGAPIGGNMQYYQNLELEVPIVDAVGLRGVVFTDAGNAWNLESNYCKASQAIRYAAIN
                     PCFNGWDSISTLRTSWGFGFRWFSPLGPL"
BASE COUNT          673 a         1288 c         1179 g          588 t
ORIGIN      
        1 cgcctgaaca atcccgagat tcagtccctc gtcgacggct gggtgcggcc tgccctcgag
       61 cagtggctca atcagacgcg cacggtcgcc gaacagatcg tcgcgcgcat cattttatcg
      121 gcgcgcgctc gcgaggcgtc gcgcgccgcg tcggctcagg tcacgcgccg gagcgccacg
      181 aacggccggc tcacgctgcc cggtaaactc agcgactgtc tctcgaacgc gcgcgagagc
      241 accgagctct tcatcgtcga gggcgactcc gccggcggct cggccaagca gggccgtgac
      301 cgcaatttcc aggcaatctt gccgctccgc ggcaaggtgc tgaataccga ggggctcgcg
      361 acgggcaagg tcctcgaaaa caaggaactg gccgatctcg tgacggcgct cggctgtggc
      421 gtgggcacgg ggttcgacct gtcgcggctc cgctatcagc gcatcgtgct gctcgccgac
      481 gcggattccg acgggcacca catcacgacg ctcttgctca cgttccttta ccggcacctg
      541 cccgagctca tcaagggcgg ccgggtcttc atcgccatgc cgccgcttta tcgcatcgat
      601 atcgggcagg cgacgtactg ggcggccgac gaccccgacc gcgaccgcct cttgaaggag
      661 cacgtcaaag gcaacgcgaa gcccgagatc acgcgcttca agggcctcgg cgagatgatg
      721 ccgaaagtcc tgtgggagac gacgctgagc cccaagacgc ggcgactcct gcgcgtcggc
      781 atcgccgacg ccctcgaaac cgatcgcatc gtcggcgagc tcatgggcaa agacccatcc
      841 gcgcgcttcc gtttcatcat ggatcgggcc gacgaggctt cggacctcga cgtctagcct
      901 cctcggcgtg ccgcaccggg accggccgac gggccccgaa tggcggcgcg aggcgatcgg
      961 cgcaatttgc cgaacaaaat ccagcttccc tgttgtgcag gcgccggctc tgggctatcg
     1021 ccgggggccc gcgtgcgccc ccttctctcg gttcttctcg ccgttctcac tctgttgagc
     1081 gcgggacgcc tcctggcaca aggaacgccg ccagcgggca cggcggcgag cgtccaaccg
     1141 gccaagacga aagcgccgaa acacacggcg accaagaaag gtcgcaccaa agccacaccg
     1201 gcaaaacccg cggacgacga cgcttcggac gacgagacga gcgcgggcga tccggcgccg
     1261 agcgccgcgg caccgagcgc caaaggtgac acggcgaaag gcgcgccccc ggcgaaaggg
     1321 acgaccacgc cgagcggcgc agcgacgccg agcggcgcag cgacaccgag cggcgcagcc
     1381 gcgtccggcg acaagggcgc cgcccccacg gaagaggaaa ccccgtcccc atcgaccgcg
     1441 attccgcctg gcgaagccga gctcgccgaa ggcatgacga tccgcgccat cgaggtcgcg
     1501 ggtaaccggc gcgtgacggc cgaggacgtg cgcacctact tgaaagagcg cgtcggcatg
     1561 tcgttttcgg ccgaggcgct caccgaggac gtgcgcgagc tctacggttc gggctttttc
     1621 gacgacatcg aggtggatct cgtgcggggc gacgacggcg tgaggctccg cttcctcgtg
     1681 cgcgagcggc cgagcatcgc caaggtgagc ttcgagggaa accaggagat cgacaacgac
     1741 gatctcaaag aaggggtcga gatcaaggaa gcgacggtac tgagccagcc ggccatccgc
     1801 cgcagcgtcc agaagatccg cgacatgtac gcggagaagg gcttcttcct cgccgaggcg
     1861 acgagctcga tcatcccgat gcgcgacggc gaggtcgagg tgaagttcaa gatcaccgag
     1921 cacgatcagg tgagcgtgcg gcgggtgacc ttcatcggca acgagcacct gtcgaccgag
     1981 gagctccgct cgctgatgtt cacgggcaac tcgggcttct tcttgttcgg ctcgggcgga
     2041 ccgttccgac aggacgcctt cgagcgcgac gtcgcggtct tgagcgccct ctactacgac
     2101 cgcggctttc tctcggtctc gatcggcacg ccgcgcatca tgctcacgcc cgatcgcagc
     2161 ggcatcgagg tgtcgatcac gatcgacgag ggcccgcgct tccgcatccg gcagctgcgc
     2221 gtctacgagc gcggcgccga cggcaaggaa tccgagccga tcgacgggcg gcggaacttg
     2281 cgcatgatgg tgcgcgcaaa gtccggcgat tggttcaacc gagccgagct gctcgaggac
     2341 ttgcaggccg tgcgcacgct ctaccgcgac cacggctacg ccagcgtcga tgccacacca
     2401 cagacgaacc tcgatcctgc gacgcacgag gtcgacgtca tcgtccccgt cgagcgcgga
     2461 ccgctggtcc atttcgaccg catcgaaatc cgcggcaaca ccaagacgcg cgacaaggtg
     2521 attcgccgcg agctcgaaat caccgagggc gacctgttca gcgagagcaa gctcgagcgt
     2581 tcgcgtaagc gcatcaacgc gctcggctac ttcgagcgcg tcgacgtttc gaccgagcag
     2641 ggcgcgacgc cggaccggat gaacgtctac atcgaagtag gcgagcgtcc gaccggcacc
     2701 ttccaggtcg gcgccggctt ctcgagcatc gagaacttca tcctgaccgc gcaggtgcag
     2761 caagcgaacc tgttcggcaa cgggcagtcc ctgtcgctgc aaatccagtg gagcggctta
     2821 cggcagctcg ccaatatccg ctttttcgag ccgtacctgc tcgacagccc gttcagcgcc
     2881 agcatcgacc tttacgacca gctgcgcgcc tacgtcgatt tctcgcaatc gagcatcggc
     2941 ggcgcgctca ccatcggcta cccgctgctc gagcccgagc tctacgccta cctcacgtac
     3001 acggcggaac aagaccaggt ctcgactcag cagacctcga cgctactcgg cacctcgacg
     3061 cgggtgagcg tgttccgcag cctcccgctc gcgaacctgt tcaacgacgg cttcacgtcg
     3121 agcattcggc cgagcctcac ctacgacacg cgcgacaatc gcctctttcc gacggcgggt
     3181 gtttacgtct cggcctcgac cgagttggcg tcgtccgcgc tcggctccac gaacgagttt
     3241 ctgcgccacc gcgtgacggg gcgtttctat tacccgctcg gtaagggctt cgtgctgaag
     3301 ctcaacacgg agttcggact cgtcacgagc ccgtcggcgg agggtgtgcc gatcttcgcg
     3361 cgcttcttcc tcggtggcat cttcgacgtg cgcggcttcc tctaccgctc gattgggccg
     3421 cgcgtcggac tcactgcctc gaccgatccg aacagcgtcc cgatcccgaa cggcgcgccg
     3481 atcggcggca acatgcagta ctaccaaaac ctcgagctcg aggtgccgat cgtggatgcg
     3541 gtgggcctgc gcggcgtggt cttcaccgac gccggcaacg cttggaacct cgaaagcaat
     3601 tattgcaaag cgagccaggc aattcgctac gccgccatca atccgtgctt caacggctgg
     3661 gacagcattt ccacgctgcg cacgtcctgg ggctttggtt tccgctggtt ctcgccgctc
     3721 ggcccgct
//
LOCUS       DATIML010000561         2177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4443774, whole genome shotgun sequence.
ACCESSION   DATIML010000561 DATIML010000000
VERSION     DATIML010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4443774"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1333
                     /locus_tag="VLJ38_09625"
     CDS             <1..1333
                     /locus_tag="VLJ38_09625"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39819.1"
                     /translation="VAERERTWAAARGPQACLMTEDLKQGSKLGDNELMLRIGRGGMA
                     TVWVAREHGRAPNEDRLVAIKAMLPELAEETEFVRMFLDEVRLVRSIRHPNVVNVYDV
                     GEHDGVMWMSMEWVEGESLHTVIAEAGKRRAIPPEMAVRIIADAAAGLHAAHELRDEH
                     AAPRGVVHRDISPHNILIGTNGAVKLVDFGVAKAVGRVSEATRAGQLKGKFGYMSPEQ
                     ARGKPIDRRSDLFALGIVLFELTTSRRLFRGETDIETLKLVISSRVPPPTSLDPHYPP
                     ELERIVLRALQRDPQARYQSAAELEADLRQYLKSKRIVVAQSGIAGLLKRVIGERIEQ
                     RRRAVRSALRARTRGSFGDDLLSNEPVFTPTGGERISVTGASVPSGPSRLSYSGISSA
                     GGSLPGVAPPSSRSVVSRGSSDPNRVIAIVAYSVGVAGILIAIAVLYLNGH"
     gene            1459..>2177
                     /locus_tag="VLJ38_09630"
     CDS             1459..>2177
                     /locus_tag="VLJ38_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39820.1"
                     /translation="MLERRHATSQQASIERHEGAPAEAQAPARLGKILVVDDQRNMRT
                     TLALMLRSAGYEVDEAADGAQGKDLGAGGAYDVVITDLRMGEDDGIEVLRGIKEAQPM
                     TEVIVMTAYGTIESAVEAMRVGAFDYIQKPFTEQELTVKVSKALESRQLRSQVQLFAQ
                     EFKERYHLENVIGRSQPIRDVLSRVIKIAPTEATALITGESGTGKELIARAVHANSKR
                     AQRPFVTVNCAAITETLLESEL"
BASE COUNT          385 a          712 c          754 g          326 t
ORIGIN      
        1 tgtggcggaa cgcgagcgca cctgggctgc cgcgcgtgga ccgcaggcct gcctgatgac
       61 cgaagacctc aagcaaggat cgaagctcgg cgacaacgag ctgatgctca ggatcggtcg
      121 cggcggcatg gccacggtct gggtcgcccg cgagcacggc cgcgcaccga acgaagaccg
      181 cctggttgcg atcaaggcga tgctccccga gctcgccgag gagaccgagt tcgtccgcat
      241 gttcttggac gaggtccggc tcgtgcgttc gatccggcat ccgaacgtcg tgaacgtcta
      301 cgacgtgggt gagcacgacg gcgtcatgtg gatgtcgatg gagtgggtcg agggcgagtc
      361 gctccacacc gtgatcgccg aggcgggcaa gcgccgagca atcccgcccg agatggccgt
      421 gcgcatcatc gccgacgcgg cggcgggcct gcacgccgca cacgagcttc gcgacgagca
      481 cgcagcgccg cgcggcgtcg tgcatcgcga tatctcgccg cacaacattc tcatcggcac
      541 gaacggcgcc gtgaagctcg tggatttcgg cgtcgccaag gccgtcggcc gcgtgagcga
      601 agccacgcga gccggccagc tcaagggcaa gttcggttac atgtcgcccg agcaagcgcg
      661 cggcaagccg atcgaccggc gcagcgatct gtttgcgctc ggcatcgtgc tcttcgagct
      721 cacgacgagc cgtcgcctat tccgcggtga aacggacatc gaaacgctca agctcgtgat
      781 ctcgagccgc gtgccgccgc cgacgtcgct cgacccgcat tacccccccg agctcgagcg
      841 catcgtgctg cgggccctgc agcgcgaccc gcaggcacgc tatcagtcgg ccgccgagct
      901 cgaagccgat ttacggcagt acctgaagtc gaagcgcatc gtcgtcgcgc agagcggcat
      961 cgcagggctg ctcaaacgcg tgatcggcga gcgcatcgag cagcggcgcc gggcggtccg
     1021 ctcggcgttg cgagcgcgca cgcggggtag cttcggtgac gatctgctgt cgaacgagcc
     1081 cgtgttcacg ccgacgggcg gcgaaaggat ttcggtgacc ggcgcgagtg tgccgtccgg
     1141 accgtccagg ctgtcgtatt ccgggatctc gtcggccggc ggctcgctgc ccggggtggc
     1201 accgccgagc agccgctcgg tggtctcgcg gggtagcagc gatccgaacc gtgtcatcgc
     1261 gatcgtcgct tacagcgtcg gcgtggccgg cattctgatt gcgattgcgg tcctttattt
     1321 gaacggtcac tgagcctaca cggcggctgc aaggccgtga attcccgccg accgagcggg
     1381 tgagggcagg agcccctggc actttcggcc tcgcgtcgaa cgagaagcgc tggtgcgttg
     1441 gcgagtggag cgctaggaat gcttgagagg aggcacgcca cgtctcagca agcgtccatc
     1501 gagcgccacg aaggtgcccc cgccgaggcg caggcccccg cacgcctcgg taaaattttg
     1561 gtcgtcgacg accagcgcaa catgcgcacg acgctcgcgc tgatgctgag gagcgccggc
     1621 tacgaagtgg acgaggccgc ggacggcgcg cagggcaagg atctcggcgc cggcggcgcc
     1681 tacgacgtcg tcatcacgga tttgcgcatg ggcgaggacg acggcatcga agtcttgcgc
     1741 ggcatcaagg aagcacagcc gatgaccgag gtcatcgtga tgacggctta cggcacgatc
     1801 gagagcgcgg tcgaagcgat gcgcgtcggc gcgttcgact acattcagaa gccgttcacc
     1861 gagcaggagc tcaccgtgaa ggtgagtaag gcgctcgaga gccgccagct ccgcagccag
     1921 gtgcagctct tcgcgcagga gttcaaggag cgctatcacc tcgagaacgt catcggccgc
     1981 tcgcagccga ttcgcgacgt gctctcgcgc gtcatcaaga tcgcgccgac cgaagccacg
     2041 gccctgatca cgggcgagag cggcacgggc aaggagctca tcgcgcgcgc cgtgcacgcg
     2101 aacagcaagc gcgcccagcg cccgttcgtc accgtcaact gcgcggccat cacggagacg
     2161 ctgctggaaa gcgagct
//
LOCUS       DATIML010000562         2712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5600833, whole genome shotgun sequence.
ACCESSION   DATIML010000562 DATIML010000000
VERSION     DATIML010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5600833"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1285
                     /locus_tag="VLJ38_09635"
     CDS             <1..1285
                     /locus_tag="VLJ38_09635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39821.1"
                     /translation="GATGVRTLAETLYLTDLTIADNVFFFATNATGKTAQQGVVFDGH
                     SAAGAGVVRVQRNEIWGGSRGVVASYSLFDVSDNTFTNVQGSMETSAAIVLSAAAAGE
                     LGDGLVACNDIVAVTNGVLLQNYTPAAVIRIQDNAFSAVTGASIVQARAGIAAVVEVR
                     RNSFVEVAAGSPAALLFQNVVALTIEQNTLIANPAAGGVKSAFGVWVRGGKWVRIENN
                     DLFVDTGSEETCTAIRIDGTTDDVEIVGNRLICIGALAPSWSGIVVHSNVAAAGAFDV
                     LEELQVEPNADKIVALAERMRKSPELFVQALQAAEAGHVLAGAVTRGPSVRVEGNTVF
                     RSQMTEGIHVSRARRVVVCGNRCQASALNDSPGLVAVNDALSALVNANEVLTSANLAA
                     FTWNGVSKLVFSSNVVTGTIAPPLPPVWQPLNIIN"
     gene            1293..1706
                     /locus_tag="VLJ38_09640"
     CDS             1293..1706
                     /locus_tag="VLJ38_09640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39822.1"
                     /translation="MSGMTTVAPRETLSELVERLAPHGMGKTAAREALLSANPHLASQ
                     SGAAEQRALPEGYLVLVPFTTKGANVRVTSDDAFARAAGLVRRLSALEKALAKKPFGV
                     ATALGMATAAKPSDAAARTLQKALAALPEATRALR"
     gene            1790..>2712
                     /locus_tag="VLJ38_09645"
     CDS             1790..>2712
                     /locus_tag="VLJ38_09645"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39823.1"
                     /translation="MSPLNELSGAVRTSWHRFLETFEPLRPKLYLFCRHLTQSPWDAE
                     DLAQDTLARAFVTLGQMGAPPPNPRAWLFRVASNLWIDRTRRAWREAPLEAEVAEAGA
                     ASDPRRAREAAGTLLGGLSPQERAAVVLKDVFDCSLEETAEALSTTVGAVKTALHRGR
                     GKLSEPELEIASTPLPAVLDAFCAAFNAGDIDRLTALLLDTVSVEVVGATTQYGPEAA
                     RRTVLDGMLFGVMRLVRAQSECGVDDRFFSDALATPPRVEAREHRGGWVLLHFYAHQS
                     GEAVRALTRLDVDGERVARLQNHFYDPELIA"
BASE COUNT          441 a          927 c          918 g          426 t
ORIGIN      
        1 cggggcgacc ggcgtccgca ccttggccga gaccctctac ctgaccgatc tcacgatcgc
       61 cgacaacgtc ttcttcttcg ccacgaatgc gacgggcaag accgcgcaac agggagtcgt
      121 cttcgatggg catagcgccg cgggcgccgg tgtcgtgcgg gttcaacgca acgaaatctg
      181 gggcgggagc cgcggcgtcg tcgcaagcta ctcgcttttc gacgtcagcg acaacacgtt
      241 cacgaatgtg cagggctcca tggagacctc tgccgcgatc gtgctctcag cggccgccgc
      301 gggagaactc ggggacgggc tcgtcgcatg caacgacatc gtcgccgtga cgaacggcgt
      361 cctgctccaa aactacactc cggcggcggt catccgcatc caggacaacg cgttctcggc
      421 cgtgaccggc gcctcgatcg tgcaagcgcg cgccggcatc gctgcagtcg tggaggtgcg
      481 gaggaacagt ttcgtcgagg tagccgccgg aagccccgcg gctttgctat tccaaaacgt
      541 ggtggcgctc acgatcgagc agaacacgtt gatcgccaat ccggcggcgg gcggcgtgaa
      601 gagcgccttc ggcgtgtggg tgcgcggcgg gaagtgggtg cgcatcgaga acaacgattt
      661 gttcgtcgat accggcagcg aagaaacctg cacggcgatc cgcatcgacg gtacgaccga
      721 cgacgttgag atcgtcggca atcggttgat ctgcatcggt gcgctcgcgc cgagctggtc
      781 gggcatcgtc gtccattcga acgtcgccgc cgcgggagcg ttcgacgtgc tcgaagagct
      841 ccaggtcgag ccgaacgccg acaagatcgt ggcgctcgcg gagcgcatgc gcaaatcacc
      901 ggagcttttc gtgcaagcgc ttcaggccgc ggaggcgggc cacgtgctgg ccggggcggt
      961 cacgcgcggg ccgagcgtgc gcgtggaggg caacaccgtc ttccgctcac agatgacgga
     1021 gggcatccac gtgagtcgcg ccaggcgcgt cgtcgtctgc ggcaaccgct gccaggcgag
     1081 cgcgctcaac gacagtccag gtctcgtcgc cgtcaacgac gcgctctccg ctctcgtcaa
     1141 cgccaacgaa gtgctcacga gcgcgaatct cgccgccttc acctggaacg gcgtgagcaa
     1201 gctcgtcttc tcttccaacg tcgtgaccgg caccatcgcg ccaccgctgc cgcccgtctg
     1261 gcagccgctg aacatcatca actgaggtct ccatgtccgg aatgaccacc gtcgccccgc
     1321 gcgaaaccct gagcgagctc gtcgagcgtc tcgcgcctca cggcatgggc aagactgcgg
     1381 cgcgcgaagc gctgctgagc gcgaacccgc acctcgcgag ccagtcgggc gccgctgagc
     1441 agcgagcact gcccgagggt tacctcgtgc tcgtcccgtt cacgacgaaa ggagcgaatg
     1501 tgcgcgtcac gagcgacgac gccttcgctc gcgccgccgg cctcgtgcgt aggctgagcg
     1561 cgctcgagaa agcgctggca aaaaagccgt tcggggtcgc gacagccctg ggcatggcga
     1621 ctgccgcgaa accgtccgac gccgccgccc gcacgttgca gaaggcgcta gccgcgctcc
     1681 ccgaagcgac gcgcgcactg cggtgagccg cggggccgtc ggctgagctc actttgggga
     1741 ctcgttcgag cctggtatct tttcgtgagc cgtctacgtt ctctcgggta tgagccctct
     1801 gaacgagctc tccggcgcgg tccgcacttc gtggcaccgc ttcctcgaga ccttcgagcc
     1861 gctgcgaccg aagctctacc tcttctgtag gcacctcacg cagagtccct gggacgccga
     1921 ggatctcgcg caggacacgc tggcgcgcgc gttcgtgacg ctggggcaga tgggagcgcc
     1981 gccgccgaac ccccgcgctt ggttatttcg cgtcgcgtcg aacctatgga tcgacaggac
     2041 gcgccgtgcc tggcgcgagg cgccgctcga ggccgaggtg gccgaggccg gcgcggcgag
     2101 cgacccgcgg cgagcgcgcg aagcggcggg caccttgctc ggtgggttgt caccgcagga
     2161 gcgcgcggcg gtggtgctca aagacgtgtt cgactgctcg ctcgaagaga cggccgaggc
     2221 gctctcgacc acggtcggcg ccgtcaagac ggccctgcat cgcggccgcg gcaagctcag
     2281 cgagcctgag ctcgaaatcg cgagcacgcc gctgcccgcg gtgctcgacg ccttttgcgc
     2341 ggcgttcaac gccggcgaca tcgaccggct gaccgcgctg ttgctcgaca cggtgagcgt
     2401 cgaggtggtg ggcgcgacga cccagtacgg gcccgaagcc gcgcgccgca cggtgctgga
     2461 cggcatgctg ttcggagtca tgcgcttggt acgggcgcag tccgagtgcg gcgtggacga
     2521 ccgcttcttc agcgacgcgc tcgcaacgcc tccgcgcgtc gaagcgcgcg aacaccgcgg
     2581 cggctgggtg ctcttgcact tctacgcgca tcagagcggc gaagccgtcc gtgccctcac
     2641 gcgcctcgac gtcgacggcg agcgcgtcgc gcgcctccaa aaccatttct acgatcccga
     2701 gctcatcgct ga
//
LOCUS       DATIML010000563         8375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3578658, whole genome shotgun sequence.
ACCESSION   DATIML010000563 DATIML010000000
VERSION     DATIML010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8375
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3578658"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..3934
                     /locus_tag="VLJ38_09650"
     CDS             20..3934
                     /locus_tag="VLJ38_09650"
                     /inference="COORDINATES: protein motif:HMM:NF036484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HSU39824.1"
                     /translation="MSAMLRDLAARDNVVLVVEHDPALIGAADRVIELGPGAGSAGGR
                     VVRDGPPAAFSGQDTATGRALGGARFTSRTPRVAKSWLEVRGARANNLRGVDAKIPLG
                     VIAAVTGPSGSGKSTLAVDVLYRALARSLGDHDVEAAGEHASITGARGVKRVALVDQL
                     PLGRTSRGNAATYTKAWDCVRALYAKEPEAVAKHLGPSHFSFNVEDGRCPSCSGEGYE
                     TVEMQFLADVRLLCPVCKGKRFQERVLAVRHRGVSIAELLEHTVTDALAHFAAEPAIL
                     RALGPVQKLGLGYLRLGQPLSTLSGGEAQRLKLARALADDHEGSLLVLDEPSAGLHAD
                     EVVRVVEALDAIVTMGGSVIVVEHDLDLVNAADWVIDLGPGAGSAGGLVVATGTPAEV
                     AATETRTGVVLREHRARSAGAGTVGALASAAGALVASKNKIAKGVYVNGARGLNGANG
                     KRVNGTSGAPQHRNGVEARVLAVSHAREHNLKDVSVAIPHGSLTVVTGPSGSGKSTLA
                     FDVVFAEGQRRFLETLTPYARQFLPTMPRPDVDAVTGIPPAIALEQRTARAGGASTVA
                     TVTEVAHYLRLLYAKVGTPHCPDHDTPIERTTFEAVREAVRRVRGKRWLLAPVVKARK
                     GTYLDVFTAAARAGIELAFCDGTRVYTESPPKLKKALEHKIDLVIGTFAEPQTFERAE
                     LERALDWGEGELKLRTEAGSEQLFSTTSACPKCGFSVPELDPRYFSFNTKQGRCETCE
                     GHGVIYEEERHGRGKKAEVFLVESPCPACDGARLAPIPRAVRVAGERYHELTARSVRA
                     SLARVKGWQFEGDRALVAKPVVAELVRRLEFLDEVGLGYLALDRAAGTLSGGEMQRLR
                     LAAQLGAGLTGALYVLDEPTIGLHPRDTGRLLGNLRRLVALGSTVLVVEHDIDTIRAA
                     DHLIDLGPGGGARGGRIVAEGSPSAVLANAESPTGRALASEPRPRTALPVPRGHAMLE
                     LTGASEHNLKNVDIAVPLARFVVVAGVSGSGKSTLVRQVLLPAVRKALGLVTDEPGAF
                     EKLSGHQPVVRALSVDQSPIGRTPRSVPATFLGIWDLIRRIFAATPAAKTLGFDASRF
                     SFNTPKGGRCTTCDGQGSLTHEMSFLPDVVTACPACGGQRFEPQTLTVRYRELSVGDV
                     LALTAEEAVKVFEAHPKIVAPLQTLCDLGAGYITLGQGSHTLSGGEAQRLKLATELTA
                     GARHEHTLYVLDEPTTGLHVADVEKLVHVLGRLVERGDTLIVIEHHPQVMAGADWLIE
                     LGPDGGDAGGRIVAAGPPKDVAKKKTATGGVLAAMTAGQAAE"
     gene            3995..4849
                     /locus_tag="VLJ38_09655"
     CDS             3995..4849
                     /locus_tag="VLJ38_09655"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSU39825.1"
                     /translation="MKLTKAIIPMAGPAHRDLPLQHVTTGDGHTKRVAALQIEELFAA
                     GIREVALVTAAGENVVFDELARQFGPAIVLKEQAEPRGFGDALLGLEKWVGDEPFVLQ
                     VCDHVFVTYANKSCTAQLMEVAAREDSSVSAVQATAESQLPYFGVVGGQRVHGTEDLY
                     VIETVIEKPTPTVAEVECLIPGLRLGSYLALFGTHALTPEVFRPLRERSDTLPPGQKL
                     GLTDSLAALASRERYLALEVHGHRVDLEGPFGLLRAQLALALHGSRRDAVLRLMLEEV
                     AYSERRQD"
     gene            4855..8172
                     /locus_tag="VLJ38_09660"
     CDS             4855..8172
                     /locus_tag="VLJ38_09660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39826.1"
                     /translation="MHALVEAILSSDAESKAGAFERFTRDAGVSELVLAGKVLHGFAV
                     DLDRNAYQRVRAAFYAHAIYRYVLPRRPELPRAGRIPWHGQKLLLERRYAPACDVFLE
                     AVAADGICDPLASALAAAYHGLGFQILAAQVQRSVRALRGNRWMFRTGHALDHPLRVR
                     PELLEKDASGYGRVLVERTPVRMDLSHSGWSDIFFLGMDYPEGARVLNVSVDLAVRGR
                     DQGTQPPITCFFRVIDEPVLRLASVDLDAAADLTEVAEVFDYARDYLGLLKAAVIAAG
                     IVPPALEGSGQSLTLVLEQLVGPGRGIELVSQVSDIPKGSRLAVSTNLLGGLITLCMR
                     ATGQVASLTGSLGDSERRTAAGRAILGEWLGGSGGGWQDSGGLWPGIKLIEGVLAAVE
                     DVEHGSSRGRLLPRHTILDQNVISAEARKKLEDSLVLVHGGMAANVGPILEMVTEKFL
                     LGTTREWEARRELLANFDALVAALKAGDMRELGRLTTRSFRGALEAIVPWVTNAYTER
                     LIAEAEAALGQDFWGFWMLGGMSGGGMGFIVDPRRKAEAETLLLDVMRRAKRDLEASL
                     PFAMDPVVYGFSINEAGTAAELLSGPSAILSPEYYVFSLPRWHEQGSRSFSPARRREL
                     DSFASEHLRGERAESVSRALVRRLFPSVAGQQDGASLDVLLARYGFDPEQHERIRREL
                     LAGRIGLAQNRLPADTVIEDVRSRDVTPVANLPASSARTGRASLERGEAFVVSLAAGA
                     GSRWTQGAGTVKALHPFAKLGGRFRTFVEVHLAKSARVGRAGAPVPPHVFTTSFLTHA
                     PLERMLARENNYGFPGTLLLSPGSSIGLRLVPTARDLRFAWEQMPQQQLEERKQKVRD
                     SGRKGLLDWVADKGEASDYRDNVATQCVHPVGHFYEVANLLINGTLCRLLDERPALRY
                     FLLHNIDTLGADLDPALLGRHIERDAVFSFEVIQRRLEDRGGGLARVGGRPRIVEGLA
                     LPCDDDEAKLSYYNSLTTWVSIDPLLALFGLTREALRDEAAVRRGVRALAARLPTYVT
                     LKEVKRRWGNAQEDVLTVAQFEKLWGDVSALPDVPIEYFVVPRERGQQLKDVAQLDGW
                     ARDGSKEYIERCAGFVE"
BASE COUNT         1274 a         2804 c         2973 g         1324 t
ORIGIN      
        1 cccgacggac gtgccgccga tgagcgccat gctccgcgat ctggccgcgc gcgataacgt
       61 cgtgctcgtc gtcgagcacg atccggcgct gatcggcgcc gccgatcgcg tgatcgagct
      121 cggtcccggc gcgggcagcg cgggtggccg agtcgtgcgc gacgggccgc cggccgcatt
      181 tagcggccag gacaccgcga cgggccgcgc gctcggcggc gcgcgcttca cgtcccgcac
      241 gccgcgcgtc gcgaagtcct ggctcgaggt gcgcggcgcc cgtgcgaaca acctgcgcgg
      301 cgtggacgcg aagatcccgc tcggcgtcat cgcggccgtg acggggccga gcggctcggg
      361 caagagcacc ctggccgtcg acgtgctcta ccgcgcgctc gcacgctcac tcggcgatca
      421 cgacgtcgaa gcggcgggcg aacacgcgag catcacgggc gcacgcggcg tcaagcgcgt
      481 cgcgctcgtc gatcagctgc cgctcggtcg cacctcgcgc ggcaacgccg ccacgtacac
      541 gaaggcgtgg gactgcgtgc gcgcgcttta cgccaaggag cccgaagccg tcgccaagca
      601 cctcgggccg tctcactttt cgttcaacgt cgaggacggg cgctgcccga gctgctcggg
      661 cgagggttac gaaaccgtcg aaatgcaatt tttggcggac gttcggctgc tttgtccggt
      721 gtgcaagggc aagcgcttcc aggagcgcgt gctcgccgtg cgtcatcgcg gcgtgagcat
      781 cgccgagctg ctcgagcaca cggtgacgga cgcgctcgcg cactttgcgg ctgagccggc
      841 gattttacgc gccctcggcc ccgtgcaaaa gctcgggctc ggctacttgc ggctcggcca
      901 gccgctctcg acgctgtcgg gcggcgaagc gcaacgcctg aagctcgcgc gcgccttggc
      961 cgatgatcac gagggctcgt tgctcgtgct cgacgaaccg agcgcgggct tgcacgccga
     1021 cgaggtcgtg cgcgtcgtcg aggcgctcga cgcgatcgtc acgatgggcg gtagcgtcat
     1081 cgtcgtcgag cacgatttgg atctggtgaa cgcggcggac tgggtgatcg atctcggacc
     1141 gggcgcaggc agcgcaggcg gcctcgtggt cgcgacgggc acgccggccg aggtcgcggc
     1201 gacggagacg cggacgggcg tcgtgctgcg ggagcaccgg gcgcgcagtg cgggcgctgg
     1261 aacggtgggc gcgctggctt cggcggcggg tgcgctggtc gcctcaaaaa ataaaatcgc
     1321 caagggcgtc tacgtcaacg gcgctcgcgg gctgaacggc gcgaacggca agcgcgtgaa
     1381 cggcacgagc ggggcgccgc agcaccgcaa cggcgtcgaa gcgcgagtgc tcgccgtgtc
     1441 gcatgcgcgc gagcacaatt tgaaggacgt ttccgtcgcg atcccgcacg gatcgctcac
     1501 ggtggtgacg gggccgagcg ggtccggcaa gagcacgctc gcgttcgacg tggtgttcgc
     1561 ggaggggcag cggcggtttt tggagacgct cacgccctat gcgcggcagt ttctgccgac
     1621 gatgccgcga ccggacgtcg atgccgtcac gggcattccg cctgcgattg cgctcgagca
     1681 gcggacggcg cgcgcgggtg gtgcttccac ggtcgcgacg gtgacggagg tcgcgcacta
     1741 tttacggctg ctctacgcga aggtgggcac gccgcattgc cccgatcacg acacgcccat
     1801 cgagcgcacg acgttcgagg ccgtccgcga agccgtccgg cgcgtgcgcg gcaagcgctg
     1861 gcttttggcg cccgtggtca aggcgcgcaa ggggacgtac ctcgatgtgt tcacggcggc
     1921 ggcgcgcgcc ggcatcgagc tcgcgttctg cgacgggacg cgcgtgtata ccgagtcgcc
     1981 tccgaagctc aaaaaagcgc tcgagcacaa gatcgatttg gtgattggca cgttcgcgga
     2041 gcctcagacg ttcgagcgtg ccgagctcga gcgggcgctc gattggggcg agggggagtt
     2101 gaagctgcgt acggaagccg ggtcggagca gctgttttcg acgacgagcg cttgtccgaa
     2161 gtgcgggttt tccgtgccgg agctcgaccc gcgctacttc tcgttcaaca cgaagcaggg
     2221 acgctgcgaa acgtgtgaag ggcacggcgt catttacgaa gaggagcggc acggacgcgg
     2281 caagaaagcc gaggtgttcc tggtcgagag tccgtgtccg gcctgcgacg gcgcgcggct
     2341 cgcgccgatt ccgcgtgcgg tgcgcgtcgc gggcgagcgg taccatgagc tgacggctcg
     2401 ctcggtgcgc gcgtcgctcg cgcgcgtgaa agggtggcag ttcgagggcg atcgcgcgct
     2461 cgtcgccaag ccggtcgtgg cggagctcgt gcggcggctc gaatttttgg acgaggtcgg
     2521 gctcggctac cttgcgctcg atcgcgcggc ggggacgctg tcgggcggcg agatgcagcg
     2581 cttgcggctc gcggcgcagc tcggcgcggg gctcacgggc gccctctacg tgctcgacga
     2641 gccgacgatt gggctccatc cgcgcgacac cgggcgtctg ctcggcaatt tgcggcggct
     2701 ggtcgctctc ggctcgacgg tgctcgtcgt ggagcacgac atcgacacca ttcgcgcggc
     2761 cgatcacttg atcgacctcg ggcccggcgg cggcgcgcgc ggcggtcgga tcgtggctga
     2821 gggctcgccg tccgcggtgc tcgcgaacgc ggagtcgccc acggggcgcg cgctcgcgtc
     2881 ggagccgcgg ccccgcacgg cgctgccggt gccgcgcggt cacgccatgc tcgagctcac
     2941 gggcgcgagc gagcacaact tgaagaacgt cgatatcgcc gtgccgctcg cgcgcttcgt
     3001 ggtcgtcgcg ggcgtgagcg gttcgggcaa gagcacgctc gtgcggcagg tgctcttgcc
     3061 cgccgtgcgg aaagcgctcg gtctcgtgac ggacgagccg ggcgcgttcg aaaagctcag
     3121 tgggcatcag ccggtcgtgc gcgcgctttc ggtcgatcaa tcaccgatcg ggcgcacgcc
     3181 gcgttcagtg ccggcgacgt tcctcgggat ctgggatttg atccggcgca tcttcgccgc
     3241 gacgccggca gcgaagacgc tcggcttcga cgcgtcgcgc ttctcgttca acacgccgaa
     3301 aggcgggcgt tgcacgacgt gcgacgggca aggctcgctc acgcacgaaa tgtcgttttt
     3361 gcccgacgtg gtgacggcgt gtccagcgtg cggcgggcag cgcttcgaac cgcagacgct
     3421 caccgtgcgc taccgcgagc tctccgtggg cgacgtgctc gcgctcacgg ccgaagaagc
     3481 cgtgaaggtg ttcgaagcgc acccgaagat cgtcgcgccg ctccaaacgt tgtgcgatct
     3541 cggcgccggc tacatcacgc tcggacaggg ctcgcacacg ctctcgggcg gcgaagccca
     3601 gcggctgaag ctcgcgaccg agctcacggc cggagcgcgc cacgaacaca cgctgtacgt
     3661 cctcgacgaa cccacgaccg gcctgcacgt cgccgacgtc gaaaagctcg tgcacgtcct
     3721 cgggcggctc gtcgaacgcg gcgacacgct gatcgtcatc gaacaccacc cccaagtgat
     3781 ggccggcgcc gattggctca tcgagctcgg tcccgacggc ggcgacgcgg gcgggcgcat
     3841 cgtggcggcg ggtcccccga aggacgtcgc gaagaagaag acggcgacgg gcggcgtgct
     3901 cgcagcgatg accgccggtc aggccgcgga gtaagacaaa ggcaattgtc tcgcagctaa
     3961 acctcgacta cctcatggtc gagcaagaca cgccgtgaaa ttgaccaagg cgatcattcc
     4021 gatggcgggc cccgcgcacc gcgacttgcc gctccagcac gtgaccacgg gcgacgggca
     4081 caccaagcgt gtcgcggcgc tgcaaatcga ggagctcttc gccgcaggaa ttcgcgaggt
     4141 cgcgctcgtg acggcggcgg gcgaaaacgt cgtcttcgac gagctggcgc gccaattcgg
     4201 gccggccatc gtgctcaagg agcaagccga accgcgtggg ttcggcgacg cgctgctcgg
     4261 gctcgagaaa tgggtggggg acgagccgtt cgttttacag gtgtgcgacc acgtgttcgt
     4321 gacgtacgcg aacaaatcgt gcacggcgca gctgatggaa gtcgccgcgc gggaggactc
     4381 gagtgtctcg gccgtgcagg cgacggcgga gagtcagctg ccgtatttcg gtgtggtcgg
     4441 cgggcaacgc gtgcacggca ccgaggacct gtacgtgatc gagacggtga tcgagaagcc
     4501 gacgccgacc gtcgccgagg tcgagtgtct gatcccaggg ctcaggctcg gctcgtacct
     4561 cgcgctgttc ggcacgcacg cgctcacccc cgaggtgttt cggccgctgc gcgagcgctc
     4621 ggatacgctt ccgcccggtc agaaactcgg gctcacggat tcgctcgccg cgctcgcgag
     4681 ccgcgaacgc tacttggcgc tcgaggtgca cggtcatcgc gtcgatctgg agggcccttt
     4741 cgggctttta cgcgcgcagc tcgcgctcgc gctgcacggc tcgcgccgcg atgccgtgct
     4801 gcgtttgatg ctggaagaag tcgcctactc cgagcgtcgg caggactgag cgcgatgcac
     4861 gcgttagtgg aggccattct ctcgtccgac gcggagagca aggcgggcgc gttcgagcgc
     4921 ttcacacgcg acgcgggcgt gagcgagctc gtcctggcgg gcaaggtgct gcacggcttc
     4981 gccgtcgacc tcgatcgcaa cgcgtaccag cgtgtgcgcg ccgcgttcta cgcgcacgcc
     5041 atttaccgct acgtgctccc gcgccgcccc gagcttccac gcgcgggccg catcccatgg
     5101 cacgggcaaa agctcttgct cgagcgtcgc tacgcgccag cctgcgacgt gttcctcgag
     5161 gccgtcgcgg cagacggcat ctgcgacccg ctcgcgagcg cgctcgccgc cgcctatcac
     5221 ggcttgggct ttcaaatcct cgccgcgcag gtccagcgct ccgtgcgcgc gctccgcggc
     5281 aatcgctgga tgtttcgcac cggtcacgcg ctcgaccatc cgctgcgtgt ccggcccgaa
     5341 ttgctcgaaa aggacgcgag cggctacggt cgcgtgctcg tcgagcgcac ccccgtgcgc
     5401 atggatctca gccacagcgg ctggagcgac atcttcttcc tcggcatgga ttatccggag
     5461 ggcgcgcgcg tcctcaacgt gtcggtggat ttggccgtgc gcggccgcga tcaaggcacc
     5521 cagccgccga tcacctgctt ttttcgcgtg atcgacgagc ccgtgctgcg cctcgcgagc
     5581 gtcgatctcg acgccgccgc cgacctgacg gaagtcgccg aggtcttcga ctacgcgcgc
     5641 gactacctcg gtttgctcaa agcggcggtg atcgcggcgg gcatcgtgcc gccggcgctc
     5701 gaaggctccg gccagtcgct cacgctcgtg ctcgagcagc tcgtggggcc agggcgcggc
     5761 atcgagctcg tgagtcaggt gagcgacatt ccgaagggca gtcgcttggc ggtgtcgacg
     5821 aacctgctcg gcgggctcat cacgctgtgc atgcgcgcga ccggccaagt cgcctcgctc
     5881 acgggctcac tcggcgactc ggagcgccgc acggcggcag gtcgcgcgat cctcggcgag
     5941 tggctcggtg gctcgggcgg cggctggcag gacagcggcg gactctggcc cggcatcaag
     6001 ctcatcgaag gcgtgctcgc cgccgtcgaa gacgtggagc acggctcgag ccgcggccgt
     6061 ctgctcccgc gccacaccat tctcgaccag aacgtcattt cggccgaggc ccgcaaaaag
     6121 ctcgaggatt cactggtgct cgtgcacggc ggcatggcgg ccaacgtcgg ccccatcctc
     6181 gagatggtga cggagaaatt tttgctcggc acgacgcgcg aatgggaagc gcgccgcgag
     6241 ctgctcgcga acttcgacgc actcgtggcg gcgctcaagg cgggcgacat gcgcgagctc
     6301 ggccggctca cgacgcgctc gttccgcggc gcgctcgaag cgatcgtgcc gtgggtgacg
     6361 aacgcctaca ccgagcggct gatcgcggaa gcggaagcgg ctctgggcca ggatttttgg
     6421 ggtttttgga tgctcggggg catgtcgggc ggtggcatgg gcttcatcgt agacccccgg
     6481 cgcaaggccg aggccgagac gctcttgctc gacgtcatgc gtcgagcgaa gcgcgacctc
     6541 gaggcgagtc tgccgttcgc gatggatccc gtcgtgtacg gcttctcgat caacgaagcg
     6601 ggcacggcgg cggagctctt gagcggtccg agcgcgattc tctcgcccga gtactacgtg
     6661 ttttcgctgc cgcgctggca cgagcagggg tcgcgttcgt tctccccggc gcgccggcgt
     6721 gagctcgaca gcttcgcgag cgaacacttg cgcggcgagc gcgccgagag cgtgagtcgt
     6781 gcgctcgtgc ggcggctgtt tccgtcggtc gccgggcagc aagacggcgc gtcgctcgac
     6841 gtgctgctcg cgcgctacgg cttcgatccg gagcaacacg agcgcatccg gcgcgagctc
     6901 ctggcgggtc gcatcggcct cgctcaaaat cgactgccgg ccgacaccgt gatcgaagac
     6961 gtgcggtcgc gcgacgtgac tcccgtcgcc aatctgcccg caagctccgc gcggacgggg
     7021 cgcgcgtcac tcgaacgcgg cgaagcgttc gtcgtgtcgc tcgcggcggg cgccggcagc
     7081 cgctggacgc aaggcgccgg caccgtgaaa gccctgcacc ccttcgccaa actgggcggc
     7141 cgcttccgca ccttcgtcga ggtgcacctc gccaagtccg cgcgtgtcgg ccgcgccggc
     7201 gcgcccgtcc ctccgcacgt ctttacgacg agcttcctca cgcacgcacc gctcgagcgc
     7261 atgctcgcgc gcgagaacaa ttacggcttc cccggtacgc tgctgctctc tccggggagc
     7321 tcgattggtc tccgcctcgt gcccacggcg cgcgatctgc gcttcgcctg ggagcagatg
     7381 ccccagcagc agctcgaaga gcgcaaacag aaggtgcgcg acagcgggcg caaaggtctg
     7441 ctcgactggg tcgccgacaa gggcgaagcg agcgactacc gcgacaacgt ggcgacccag
     7501 tgtgtgcacc cggtcggtca cttctacgaa gtcgcgaacc tgctcatcaa cggcacgctc
     7561 tgccgcctgc tcgacgagcg accagcgctt cgctacttct tgctgcacaa catcgacacg
     7621 ctcggcgccg atctcgatcc ggcgctgctc ggccgccaca tcgagcgtga cgccgtgttc
     7681 agcttcgagg tgattcagcg ccggctcgaa gatcgcggcg gcggactcgc gcgcgtcggc
     7741 ggccggccgc gcatcgtcga ggggctcgcg ctgccgtgcg acgacgatga agcgaaactc
     7801 agctattaca attcgctcac gacctgggtc tccatcgacc cactactggc gctgttcggt
     7861 ctcacgcgcg aggcgctgcg cgacgaagcg gcggtccgcc gcggcgtgcg tgcactcgcc
     7921 gcgcgactgc cgacgtacgt cacgctcaag gaagtcaaac gacgctgggg caacgcacag
     7981 gaagacgtgc tcacggtggc tcaattcgag aaactctggg gtgacgtgag cgcccttccc
     8041 gacgtgccaa tcgagtactt cgtcgtgccg cgcgaacgcg gccagcagct caaggacgtg
     8101 gcgcagctcg acggctgggc gcgcgacggg tccaaggagt acatcgagcg ctgcgcgggg
     8161 ttcgtcgagt agcggctttc tcgagccgtt cgcggactag tgtcacaacg tccacccagc
     8221 ggggtggcag cggccgtcaa tcgctaaaaa tctctgcgta gaaccctgcg acacgtgcga
     8281 aggggagtgg cggttcggca gcgagtgtct taagcaggcg gggccaagcc catgcctgcg
     8341 actctcaacg agcgaccgtc acgaccgggt tacgc
//
LOCUS       DATIML010000564        10148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1271914, whole genome shotgun sequence.
ACCESSION   DATIML010000564 DATIML010000000
VERSION     DATIML010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10148
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1271914"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..1205)
                     /locus_tag="VLJ38_09665"
     CDS             complement(171..1205)
                     /locus_tag="VLJ38_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39827.1"
                     /translation="MSRPGSSRRQPWAAAVALCAFGVWAPAACSATGNRSGLDGSGAT
                     GSGATGSGASGGTVVLGSGGSINPSGGDATCARIGMFGRPPSYGATQGGTDNTDALRD
                     WLNAHVKAGTTVDVVTTDTAITADLLGKYDIIILQALEQREGGPYWSFSAAELATFES
                     WVRAGGAVIALTGYGAQAAEVKPTNQLLAFTGMAYNTDDAFATCPDNCCYCAGSSIPV
                     HGWHADHPIAANVTAVGAFHGRTIQAGDAALVASEGTAVYGATKELDAGRVFFFFDEW
                     VTYSSQWTQAAGVGGFTPDASCSDPNNVCVGRTPSDGYQVPQFWYNALKWATGNATCF
                     DFTADVPVVR"
     gene            1476..2546
                     /locus_tag="VLJ38_09670"
     CDS             1476..2546
                     /locus_tag="VLJ38_09670"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF009395.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HSU39828.1"
                     /translation="MLETQNLRVVDTTLLQSPSAVTAELPLTTRAAETIVRSREEIQR
                     SIEGKSPRLLTIVGPCSIHDPNAALEYAEQLLRLRERVASELVLIMRVYFEKPRTTVG
                     WKGLINDPHLDGTYDIPTGIRRARKLLSDLAERGLPAATEMLDPIIPQYIADLIAWSA
                     IGARTTESQTHREMASGLSMPVGFKNGTDGSLGVAVNAMIAASQPHSFLGIDESGRVG
                     VVRTAGNPHTHLVLRGGSSGPNYGEDAVKRAVASLEQAGVNPRVLIDASHDNSGKKAD
                     RQPSVVADVGAQVRRGSANVLGVMLESHLVGGRQELKDKSSLVYGQSITDACIDFPTT
                     ERTVLELAECAAARRTPAAVAS"
     gene            complement(2637..3239)
                     /locus_tag="VLJ38_09675"
     CDS             complement(2637..3239)
                     /locus_tag="VLJ38_09675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39829.1"
                     /translation="MRPTSAWLSVGIVAVGIAFVCGLLLGHGKAPATAAGVSTPSVPL
                     TSRTPAAPVARMPAALAPSAANSGNAPNPTDTTTSTAADTSVSAAPSTSVTAAPADGA
                     RSTAPKPALEPFNAKAARTNLSVAVARAQRCRDQTAPAGSVSAVVTFVASGRVADVTV
                     ITPAYAGTHTGKCIVSKLKTAQVPPFAGEPETMKKTFTLR"
     gene            complement(3750..7259)
                     /locus_tag="VLJ38_09680"
     CDS             complement(3750..7259)
                     /locus_tag="VLJ38_09680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39830.1"
                     /translation="MDLERQVGLRGDGSVVVPDRRAMFRAIALKLAAMGFPVPDQVGG
                     DAEVLDLGRDLFARYREQSRLLSEHLSPADRRVQDFLDALFVELAGESPIRLPSETFL
                     LDRYGLARELSLPLDADHWHNEQVSSYRLDNGVLHNPINDRRTTQGVFHVAEVGLPVP
                     GDKLGVPLIAYARMLREALRPPRDLLRLPYTANWEAPVETMVSLLLRPLVCPEVPRHS
                     SEKRLEIRFFAPGGLVSNLDFVESIFGNWGDPYLPENDAGLDVAGWTGHTGCVILAPH
                     LTRLKKKALGLPHVSQATAEQRTNGMCWSSDDELYNGGSPFKITARSASGVMVTILAD
                     NYFGYCKKEVKTQISFSANLYGLAEEEHAGGALAFSTVSLGDRYAPGGRQLGSEHRFG
                     EAVELLGERVTAHESGYATDNVYPELHYVPEDADFDVKKQAVTWARGDAEAQIKLLPG
                     HVYILPNGYKVRMQKHPAAPSWRLVGTMPEGTFCHKPCTVSGGGKSEISKSLSDAVLY
                     GPILVQNVEEDLTLVDAIFKKDFSDSLSNHGRGGKGRPILSSERSLGSVIKLLTPTPD
                     HSPEHNVWLESIPKHVRALVFVIKRFYSPDWGDDWRSHFSVDIINGAPGHELKHDGRK
                     LVGSYLRVGLEENGAWRTYKLRQDFVAADKVQMEDDISASTVVSRDVLKRLPKEYDGH
                     PSLKLVANCESRLFQRPDEAIHPGFDKQTEVDMSSPGLFCSNFQPLPTSDVKQLVEDV
                     AMHDAFTVPMQEHLTKNAARAQGFSICSAKPRLVGGKPSKNPRYLQVRPDVSRPRDRY
                     VAEMGARLYRKIPIEDAVVFPVISVLSGRRNNPPDGAIRPLCVYGPIHYQELPELFMD
                     YICSVTGKSPSTTGAGTEGALTKGPFNALCATADLNNALVSILLCGYAGFSSAAGWIG
                     PNYCFEHDISLLVPEIWCRLFPQERDPERLLAEGHLERLDDYDFEGRRVLASRLGCRI
                     TSKFVATFFGRVFDNPATVFSEEILRPELQDAKTFADGVDNIVDAQRRVAEAYFKDGS
                     IEDACPPLKALLHIMVHGQYQGKDARDPEIRALFTREALLTSDWYKERLRVKQERDVE
                     LWTRHVRALSAFLARPGHRDEALRLGIEERLELARHELERVSSERYLESLEGTIGADP
                     IHAETTRAARRLKAERGVETQLN"
     gene            complement(7347..8237)
                     /locus_tag="VLJ38_09685"
     CDS             complement(7347..8237)
                     /locus_tag="VLJ38_09685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39831.1"
                     /translation="MSTKRWIEAGSDASEFERALLASGLDADPPAEAEGAVWHSVAST
                     LGVPLPPVAATTSAAASVEALTSVSALVTLGKGFALGVAVSLGLVGVARLETARAPAA
                     QPARAPLVRSTRAAVTQDSGTKSIAAPNPLPELPRAAASTLVAEALRGELPATVPSPR
                     APAPPRLPEVSAPVTDLGPASLPSVAAFPIAAPRAPSPQAEREHQSQLEEEALLLRRA
                     RAELRANRLAAAFATLEASREKFSLPELRQEREALLIELLFRSGERARAVEKARRFLV
                     QYPQSPHAAQVRSIAEADAR"
     gene            complement(8234..8830)
                     /locus_tag="VLJ38_09690"
     CDS             complement(8234..8830)
                     /locus_tag="VLJ38_09690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39832.1"
                     /translation="MTRVRAELTAAPGAQLPLSAPDFAAFEAVYRGHFRFVWRSLRRL
                     GVPERDLADAVQEVFVVVHKKFAEFDAGTRVTTWLYAIALRVASDRRRRASERHEVLG
                     EVPEPTSVAATDSSELAERRALLEKALSALPLEQRAVFTLFELEGLDGAEIATLLAIP
                     VATVHSRLRLAREGFRRVVTRARVREAFELVRLGEEKP"
     gene            complement(8827..9771)
                     /locus_tag="VLJ38_09695"
     CDS             complement(8827..9771)
                     /locus_tag="VLJ38_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39833.1"
                     /translation="MAVCVLSLAATLDARAERVSPALVVTRAPGAEDCPDAAGIVTRV
                     RAMTQGDPFTPAADGRRDTWLELDFAQTLAGYRAVITARGRRQGTRSIEDVGPGCASL
                     ADAVTITVVMLLDPEVAAAKSVSDPNDLPVPPKDETPASPARVAFGAEAAGGVVLGVL
                     QHGGPFVEAGARLKFARSFAFALGGGFVFPDHTLAPPGRVSLELWYGYARFSGTLFEH
                     AGTHLALFLGPSVGVLGGSSDGFDYRTERHLLWVAGAFGVEAFALLSGPFSWSARLSA
                     VTPFRYEGFYVSDAGEPHRAFRTPGIGGALSLGVSVMP"
BASE COUNT         1699 a         3392 c         3441 g         1616 t
ORIGIN      
        1 gcgagcagca cgacctgcag cgcgaacacc tccagacact cgcgccggta ttcgagactg
       61 agcgcgagca gtcgccccaa aaggccgtgc ttctcgcgcg gtcgcgcttc ggcgcgcggt
      121 gctggcatca cgcggttttt atcctcgcgc gcgggtacgg aagctcgagc tcagcgcacg
      181 acgggaacgt cggccgtgaa gtcgaagcag gtcgcgttgc cggtcgccca cttgagcgcg
      241 ttgtaccaga actgcggcac ttggtagccg tcgctgggcg tgcgcccgac gcagacgttg
      301 ttcgggtccg agcacgaagc gtccggcgtg aagccgccga cgcccgccgc ctgcgtccac
      361 tgactcgagt aagtcaccca ctcatcgaag aagaaaaaca cgcgccccgc gtcgagctct
      421 ttggtcgcgc cgtaaaccgc cgtgccttcg gacgccacga gcgcggcgtc gcccgcttgg
      481 atggtccggc cgtgaaatgc acccacggcg gtgacgttcg cggcgatcgg gtggtcggcg
      541 tgccagccgt gcaccgggat cgagctgccc gcgcaatagc agcaattgtc ggggcaagtc
      601 gcgaacgcgt cgtccgtgtt gtacgccatg cccgtgaagg cgagcagttg gttcgtcggc
      661 ttgacctcgg cggcttgcgc gccgtagccc gtgagcgcga tgaccgcgcc gcccgcgcgc
      721 acccacgact cgaacgtggc gagctccgcg gcggagaagc tccagtaggg tccaccttcg
      781 cgctgctcga gcgcctgcaa gatgatgatg tcgtacttgc cgagcaaatc ggccgtgatc
      841 gcggtgtccg tcgtcacgac atcgacggtc gtgccagctt tgacgtgcgc gttgagccaa
      901 tcgcggagcg catccgtgtt gtcggtgccg ccctgggtcg cgccgtagct cggcggtcgc
      961 ccgaacatgc cgatgcgggc gcacgtcgcg tcaccgccgc tcggattgat gctgccgccg
     1021 ctgcctaaaa cgacggtgcc accggatgca ccgctgcccg tcgcgccgct gcccgtcgcg
     1081 cccgagccgt cgagcccgct gcggttgccg gtcgcactgc acgcggctgg ggcccagacg
     1141 ccgaaagcac agagcgcgac cgctgcggcc cagggttggc gtcgagagga accaggccgt
     1201 gacattgaag cgacgcgctg aagtgtagtc ccaagttttg gtttgtttag tgacgacgcc
     1261 gaaagtgacg agaccgaacc ttgcgctcgg gggccgcggc cgctagactg atggcctctc
     1321 gtgatttccg gccgtttttc ctattggtgt ggcttttggc ccgcggcaca cgcggcgtcc
     1381 agggtcggcc tctagcgaga agtagcgagc cgaaaacacc aaaacccctg gtcgccgcga
     1441 gcggccgggg gtttttcgtt tcagggaccc ttcaaatgct cgaaacccag aatctccgcg
     1501 tcgtcgatac caccttgctt caaagcccga gcgccgtcac tgccgagctc ccgctcacca
     1561 cccgtgcagc ggagacgatc gtccgttcgc gcgaagagat ccagcggtca atcgagggca
     1621 agagcccgcg cttgctcacg atcgtgggcc cctgttcgat ccacgacccg aacgcggcgc
     1681 tcgagtacgc cgagcaacta ctgcgcttgc gcgagcgcgt cgcgagcgag ctcgtgctca
     1741 tcatgcgcgt gtatttcgag aagccgcgca cgaccgtcgg gtggaagggg ctcatcaacg
     1801 acccgcacct cgacggcacc tacgacatcc cgaccggcat tcgccgcgcg cgcaagctcc
     1861 tgtccgacct cgccgagcgc gggctgcccg cggcgacgga gatgctcgat ccgatcattc
     1921 cgcagtacat cgccgatctc atcgcctggt cggccatcgg cgcccgcacg accgaaagcc
     1981 aaacgcaccg cgagatggcg agcggcctgt cgatgccggt cggcttcaag aacggcacgg
     2041 acggctcgct cggcgtggcc gtcaacgcga tgatcgccgc ctcgcagccc cacagtttcc
     2101 tcggcatcga cgagagcggg cgcgtgggcg tcgtgcgcac ggcgggcaat ccgcacacgc
     2161 acctcgtgct ccggggcggc agcagcggcc cgaactacgg ggaagacgcc gtgaagcgcg
     2221 ccgtcgcgtc cctcgagcag gcgggcgtga acccgcgcgt gctcatcgac gcgagccacg
     2281 acaacagcgg caagaaagcc gatcggcagc cgtcggtggt cgccgacgtg ggcgcacaag
     2341 tacggcgcgg ctcggcgaat gtgctcggcg tcatgctcga gagtcacctc gtcggcggcc
     2401 gccaggagct caaagacaaa tcgagtctcg tgtacggaca gagcatcacg gatgcctgca
     2461 tcgacttccc gaccacggag cgtacggtgc tcgagctcgc ggaatgcgcg gctgcgcgac
     2521 gcacaccagc cgcggtcgcc agctgagcgc tgcgacgaag cagggccgcg agctgaacgc
     2581 tgcgtttacg gcgagcaccg cacgcggtgt tcacggccaa gccgtcactc gcgcgttcac
     2641 cgcagcgtga acgtcttctt catcgtctcg ggttcgccgg caaacggcgg cacctgcgcg
     2701 gttttgagct tcgagacgat gcacttaccg gtgtgcgtgc cggcgtaagc cggcgtgatc
     2761 accgtcacgt cggcgacgcg acccgacgcc acgaacgtaa cgaccgccga aacgctaccg
     2821 gccggtgccg tttggtcacg gcaacgctgc gctcgcgcga cggcgacgct caggttcgtg
     2881 cgcgcggcct tcgcgttgaa cggctcgagc gcgggtttcg gcgccgtcga tcgcgcgccg
     2941 tctgcgggcg cggccgtcac gctggtcgag ggcgccgcgg atacggaggt gtctgccgcc
     3001 gtggacgtgg tcgtatccgt cgggttcggg gcgttcccgc tgttcgccgc actcggtgca
     3061 agcgcagcgg gcattcgcgc aacgggcgct gcgggcgttc tcgacgtgag cggaaccgag
     3121 ggcgtgctca ccccggcagc ggtcgccggt gccttgccgt gtccgagcag gaggccgcag
     3181 acgaacgcaa tgccgacggc aacgatgccg acggagagcc aagcgctcgt tggacgcacg
     3241 ccgagcgcgc tcagacctcg ggaccgcaac caagccaaca gcggcggacg gccctcctct
     3301 tccaaatccg cggccgtgag gggccgcgga tcgagcgttg gtatcggccg cggcgggtta
     3361 gtgccagcgt cggcgggcgt ccgtccgccg gacagagccg gcagaatggg ctgcggaccg
     3421 gacgccgcag gcggcaaact ctgaggtggg ctccctggcg gtacgggcag cggcggcaac
     3481 tgaatggctg cggccgtctc gtcccaccag cctcggtcgg tcgggattgg cgtaggacgg
     3541 accttcgact gctgctcggc ggacgtgtct gtatccacct cgcgtggaac gttgaggtcg
     3601 ccggcagctg ggtccgcctc agccatatcg aaagcacatc gtagacgcgg ggcccgcgct
     3661 tgaaaacccc gcggcgaaca cgaggcagtt cgacccgctt cggcacgcgg ctttttccgc
     3721 cgctgctgaa gttgctgttg cggatttact cagttgagct gcgtctcgac accgcgctcg
     3781 gccttcagac ggcgcgcggc gcgtgtcgtc tcggcgtgga tgggatcggc gccgatggta
     3841 ccctcgagcg actcgaggta gcgctcgctg ctcacccgtt cgagctcatg ccgcgcgagc
     3901 tcgagccgct cctcgatacc gagccgcagc gcttcgtcgc gatggcccgg acgagccaaa
     3961 aacgcactca gcgcacgcac gtgccgtgtc cagagctcga cgtcgcgctc ctgcttcacg
     4021 cgcaggcgct ccttgtacca atcgctcgtg agaagcgcct cgcgcgtgaa gagcgcgcgg
     4081 atctccggat cgcgcgcgtc cttaccttga tactggccgt ggaccatgat gtggagcagc
     4141 gccttgagcg gcgggcacgc gtcctcgatg ctgccgtcct tgaagtatgc ctccgcgacc
     4201 cgtcgctgcg cgtccacgat gttgtcgaca ccgtcggcga aggtcttcgc atcctggagc
     4261 tcggggcgca ggatctcttc gctgaacacg gtcgctgggt tgtcgaagac gcgaccgaag
     4321 aacgttgcga cgaacttcga ggtgatgcgg cagccgaggc ggctcgcgag cacacgccgc
     4381 ccctcgaagt cgtagtcgtc gagccgctcc aggtgacctt cggcgaggag acgctcgggg
     4441 tcgcgctctt gcggaaagag gcggcaccaa atctcgggca cgagcaggct gatgtcgtgc
     4501 tcgaagcagt aattcggccc gatccagccc gcggccgagc tgaagcccgc gtagccgcag
     4561 agcaggatcg agacgagcgc gttgttgaga tcggccgtgg cgcagagcgc gttgaagggg
     4621 cccttggtga gcgcgccctc ggtgccggcg cccgtcgtgc tcggcgattt gccggtgacc
     4681 gagcagatgt agtccatgaa gagctcgggg agctcctggt agtggatggg cccgtacacg
     4741 cagagcggcc ggatcgcgcc gtccggcgga ttattgcgcc gtcccgagag cacgctgatg
     4801 accggaaaga cgacggcgtc ctcgatcggg atcttgcggt agagccgcgc ccccatctcc
     4861 gcgacgtagc ggtcacgcgg ccgcgagacg tcggggcgca cctggagata gcgcgggttt
     4921 ttgctcggct tgccgcccac gaggcgcggc ttcgccgaac aaatcgaaaa gccctgcgcg
     4981 cgcgcggcgt tcttcgtgag gtgctcttgc atgggcaccg tgaatgcgtc gtgcatggcc
     5041 acgtcttcga cgagctgctt cacgtccgag gtcgggagcg gctgaaaatt cgagcagaac
     5101 aggcccgggc tcgacatgtc cacctcggtt tgcttgtcga agccggggtg aatcgcttcg
     5161 tcgggacgct ggaagagccg cgactcgcag ttggcgacga gcttcaggct cggatggccg
     5221 tcgtactctt tcggcaagcg cttgaggacg tcgcgtgaca cgaccgtgga cgcgctgatg
     5281 tcgtcctcca tctgcacctt gtcggcggcg acgaaatcct ggcgcagctt gtaggtgcgc
     5341 caggcgccat tttcttccaa gccgacgcgc aggtagctgc cgacgagctt gcggccgtcg
     5401 tgcttgagct cgtggcccgg cgcgccgttg atgatgtcga cgctgaagtg cgagcgccag
     5461 tcgtcgcccc agtcggggct gtaaaagcgc ttgatcacga acacgagcgc gcgcacgtgc
     5521 ttcgggatgc tctcgagcca cacgttgtgc tcgggtgaat ggtcgggcgt cggcgtgagc
     5581 agcttgatca cggagccgag cgagcgctcg gacgagagga tgggacgccc cttgcctccg
     5641 cggccgtgat tcgaaagtga atcggagaaa tcctttttga agatggcgtc gacgagcgtg
     5701 agatcctcct cgacgttctg cacgaggatg gggccgtaga gcacggcgtc gctcaggctc
     5761 ttgctgattt cggacttgcc gccgcccgaa acggtgcacg gtttgtggca gaaggttccc
     5821 tccggcatcg tgccgacgag gcgccagctg ggcgcggcgg gatgcttctg catgcgcact
     5881 ttgtagccgt tcggcaaaat gtagacatga cccgggagta gcttgatttg cgcttcggcg
     5941 tcgccgcgcg cccaggtcac ggcttgcttc ttcacgtcga aatcggcgtc ctcggggacg
     6001 taatgcagct cgggatacac gttgtcggtc gcgtacccgg actcgtgcgc cgtcacacgc
     6061 tccccgagta gctcgaccgc ctcgccgaag cgatgctcac tcccgagctg ccgcccgccc
     6121 ggcgcgtagc gatcgccgag gctcaccgtc gaaaacgcga gcgctccgcc cgcgtgctct
     6181 tcttccgcga gcccgtacag gttcgcgctg aagctgatct gcgttttgac ttctttcttg
     6241 cagtagccga agtaattgtc ggccaggatc gtcaccatca cgccgctcgc gctccgcgcc
     6301 gtgatcttga acgggctgcc gccgttgtag agctcgtcat cgctcgacca gcacatgccg
     6361 ttcgtgcgct gctcggccgt cgcttgcgag acgtggggca agccgagcgc cttcttcttc
     6421 agccgcgtga ggtgcggcgc gaggatcacg cagccggtgt gaccggtcca gccggcgaca
     6481 tcgagaccgg cgtcgttttc gggcaagtac ggatcgcccc agttgccgaa gatggactcg
     6541 acgaagtcga ggttcgagac cagtccgcct ggcgcgaaga agcgaatttc taggcgcttt
     6601 tcgctcgagt gacgggggac ttccgggcaa acgagcgggc gcaagaggag cgagaccatc
     6661 gtctcgactg gtgcctccca attcgcggtg tacggcaagc gcaagaggtc gcgcggcgga
     6721 cgcagcgctt cccgcaacat acgcgcgtag gcgatcagcg gcacgccgag cttgtcgccg
     6781 ggcacgggca gcccgacttc cgcgacgtga aacacaccct gcgtcgtgcg tcgatcgttg
     6841 atggggttgt ggagcacgcc gttgtcgagt cggtaactcg acacttgttc gttgtgccag
     6901 tggtcggcgt cgagcggcag cgaaagctca cgcgcgaggc cgtagcgatc gagcaagaac
     6961 gtctccgacg gcagccggat cggcgactcg ccagcgagct cgacgaagag cgcgtccaag
     7021 aaatcctgaa cccgtcggtc cgccgggctc aaatgttcgc tcagcagacg actctgctcg
     7081 cggtagcgcg cgaacaagtc acggccgaga tcgagcacct cggcgtcgcc cccgacctgg
     7141 tcgggcaccg gaaaacccat ggccgcgagc ttgagcgcga tcgctcgaaa catcgcgcgc
     7201 cgatcgggca cgaccacact gccgtcaccc ctgagaccaa cctgccgctc gagatccatg
     7261 gggactcctc acggttccga aagaaaccgg acgccctttt taccagcacg ccgcctcaag
     7321 ggccacgaga gaacgacacg cgctctctaa cgggcgtcgg cctccgcaat gctccgcacc
     7381 tgagcggcgt gagggctctg cgggtactga accagaaatc gccgagcctt ctcgaccgcg
     7441 cgcgctctct caccgctccg aaacaggagc tcgatgagca gcgcttcgcg ttcctgacgg
     7501 agctcgggta acgagaattt ttcacgcgaa gcctcgagcg tcgcaaacgc cgcggcgagg
     7561 cgattggcgc gaagctcggc gcgtgcgcgc cggagcagca gcgcttcttc ctcgagctgg
     7621 ctctgatgct cccgttcggc ttgtggcgac ggggcgcgag gcgcggcgat ggggaatgcg
     7681 gcgacggacg gcagcgacgc agggcccagg tccgtcacgg gcgcggatac ttccgggagc
     7741 ctcgggggcg ccggcgctcg tggcgacggg acagtcgctg gcagctcccc gcgcagagcc
     7801 tccgccacga gcgtggacgc cgccgctcgt ggaagctccg gcaggggatt cggagctgcg
     7861 atcgacttcg ttcccgagtc ttgagtcact gcggctcgag tcgaacgtac gagtggcgcg
     7921 cgcgctggct gcgcggcggg cgcgcgtgcc gtttcgagcc gcgcgacacc gacgagaccg
     7981 agactcacgg ccacgccgag cgcgaaacct ttgcccagcg tgacgagcgc ggagacactg
     8041 gtcagcgctt cgacgctcgc cgccgccgaa gtcgtcgccg cgaccggcgg caacggcacc
     8101 ccgagcgtcg acgcgacgct gtgccaaacg gcgccttcag cctcggcggg cgggtccgcg
     8161 tcgagtccac tcgctagcag cgcccgctcg aactcgctcg cgtcactgcc cgcctcgatc
     8221 cagcgtttgg tgctcatggc ttctcctctc ccagacggac gagctcgaag gcttcacgaa
     8281 cgcgggcccg cgtcacgacc cgccgaaaac cttcgcgcgc gagccgtagg cgcgagtgca
     8341 ccgtggcgac ggggatcgcg agcagcgtcg cgatttcggc gccgtcgagg ccctcgagct
     8401 cgaacagcgt gaacacggcg cgctgctcga gcggcaaggc ggacagtgct ttttcgagca
     8461 aagcgcgacg ctcggcgagc tcgctggaat ccgtcgctgc gacgctcgtg ggttccggca
     8521 cctcaccgag cacttcgtgt cgctcggagg cgcgccggcg ccgatcgctc gcgacgcgca
     8581 gcgcgatggc gtagagccac gtcgtcacgc gcgtgccggc gtcgaattcc gcgaacttct
     8641 tgtgcacgac cacgaacacc tcctgaacgg cgtcggctaa atcgcgttcg ggcacgccga
     8701 gacgccggag cgaacgccaa acgaagcgaa agtgcccgcg gtagacggcc tcgaacgccg
     8761 cgaaatctgg cgctgagagc ggtagctgcg cgccgggagc ggcagtcagc tcggcccgga
     8821 cgcgcgtcat ggcatcaccg acacgccgag cgacagcgcg ccgccgattc ccggagtgcg
     8881 aaacgcgcgg tgcggctcgc ccgcgtcgct cacgtaaaag ccctcgtagc ggaacggcgt
     8941 gacggcggac agtcgcgccg accacgaaaa cgggccggaa agcagcgcga acgcctcgac
     9001 cccgaacgcg cccgccaccc agagcaggtg ccgctcagtg cggtaatcga aaccgtcact
     9061 cgagccgccg agcacaccga cgctcggccc caaaaatagc gctaggtgcg ttccggcgtg
     9121 ctcgaagagc gtccccgaaa accgcgcgta gccgtaccag agctcgagcg acacgcggcc
     9181 gggcggcgcc aaagtgtgat cgggaaagac gaagccgccg ccgagagcga acgcgaacga
     9241 acgcgcaaac ttcagtcgcg cgccggcttc gacgaagggg ccgccgtgct gcagcacacc
     9301 gagcacgacg ccgccagcgg cttcggctcc gaacgcgacg cgcgccggag acgcaggcgt
     9361 ttcgtccttg ggcgggacgg gtaggtcgtt tgggtcgctt accgattttg ccgcagccac
     9421 ttccggatcg agcagcatca cgactgtgat cgtgacggcg tccgcgaggc tcgcgcagcc
     9481 cggacccacg tcctcgatcg agcgcgtgcc ttggcgccgg ccgcgcgcgg tgatcacggc
     9541 gcgatacccc gcgagggttt gcgcaaaatc gagctcgagc cacgtgtcgc gccgaccgtc
     9601 cgctgctggc gtgaaggggt caccctgcgt catcgcacgc acgcgagtca cgattcctgc
     9661 agcgtcagga cagtcctcgg cccccggcgc gcgcgtcacc acgagcgccg gtgacacgcg
     9721 ttccgcgcgt gcatcgagcg tggcggcgag cgacagtacg cagacagcca ccgcccggag
     9781 ctcagtacgg ccggggatca ccacagttca tcagcgacgg gtcgcacgta ttggcgggga
     9841 ccgttgcctg tggatcgtac gcagtgccct ttggaatgca gtacgaaccc gcgatcgaat
     9901 cgttccccgg tagacccaag tctcgaatca agggcgagca ctccatgtcg ccagggcagt
     9961 cgcagaaggg accggggccg ggaccgtcgc agcggcacga gcagatcacc cgttccgcag
    10021 ccggcatcgc caagaactgg gcgtccacag gaacggtgac ggggtcgttc gagtccggaa
    10081 taaaacattg tggttcgctc acgtggtcgg acctttggcc gtagggacag ctcacgcgac
    10141 cttgaaag
//
LOCUS       DATIML010000565         3017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3865738, whole genome shotgun sequence.
ACCESSION   DATIML010000565 DATIML010000000
VERSION     DATIML010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3017
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3865738"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VLJ38_09700"
     CDS             complement(<1..248)
                     /locus_tag="VLJ38_09700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39834.1"
                     /translation="MLLAATAGCSKGEGPARSEAAAVSRAIEALREADNGKKAELLRA
                     LRAVPCSVPDICGVQSFCAAAYDEHVQVLALIDAAKAAA"
     gene            complement(295..834)
                     /locus_tag="VLJ38_09705"
     CDS             complement(295..834)
                     /locus_tag="VLJ38_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39835.1"
                     /translation="MAKPTKKIICPSCGFANTPPLANHRCASCGAKVEELKPLLTRQE
                     ELERRYQQESFSPTWFLVSIAIMIVTTAAFVMGLPMVVPALDFEGSAGMMVSIPVWFF
                     GGMLIGLVSPGRTFVEPMIAVFLVAMPTAFILYSNQTVKTMPAFMYLLLSALGVLFTL
                     IGAYVGERIQMGPPPKAAE"
     gene            963..1628
                     /locus_tag="VLJ38_09710"
     CDS             963..1628
                     /locus_tag="VLJ38_09710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39836.1"
                     /translation="MQSSSENPSQPAPESAKKHDLASLPAPRRPWRRVTLVTLALGAL
                     GSLALSFAVLPDVVYSLHGGAPRDLGDLVSARLEPTLSDVWVHGEAQLSATRAIRYAR
                     PLEHDTYRLASVEGNPKVWVQIRVPANEESPRFVPPDSFVGRLLKVSSLGIRQRGLPD
                     AVRESGVEPPPADAWLLVDGESPAALRWAFGLFGLLLAFATFNVVGLVRLTRPIPSGE
                     PST"
     gene            1625..2743
                     /gene="thiO"
                     /locus_tag="VLJ38_09715"
     CDS             1625..2743
                     /gene="thiO"
                     /locus_tag="VLJ38_09715"
                     /EC_number="1.4.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016647 - oxidoreductase activity, acting
                     on the CH-NH group of donors, oxygen as acceptor [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine oxidase ThiO"
                     /protein_id="HSU39837.1"
                     /translation="MKKRKASPDVVVVGGGVMGTASAWELAQRGLSVVVLERSVPGAE
                     ASSAAAGILGAQVESHAPGPLAELSRASRRLYPAWVRALERATSVDTGYRECGVLKVA
                     FRAPELGRLAREVAWQKPRPRVLSRRALARREPNLDTKLAGGVAYDDDARVDPRRLFR
                     ALHIAAARAGVVFRSGAYVRRVVTKDGRAAGVALDDGSVVRAPHVVVAAGSWTSLVEG
                     LGIAPGAVQPVRGQIVELETPEPLITSVVFGPRAYLVPRDDGRTLVGSTMEFVGYRRE
                     VTAAAVRDLLTAAIELVPAFGAASLGQSWSNFRPYTQDELPLLGGTELPGLWLASGHY
                     RNGILLAPITAAVVAALVRGKASPVPLAPFAPARRAKS"
     gene            2810..>3017
                     /locus_tag="VLJ38_09720"
     CDS             2810..>3017
                     /locus_tag="VLJ38_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HSU39838.1"
                     /translation="MTLALGVLVSGTGTNLQAILDATRDGSLDARVSCVISNRTEAMA
                     LERAARAGVPALAIPHQTFDTRAAF"
BASE COUNT          438 a         1034 c         1079 g          466 t
ORIGIN      
        1 gccgcggctt tggcagcgtc gatgagcgca agcacttgga cgtgctcgtc gtaagcggcc
       61 gcgcagaagc tttgcacgcc gcaaatgtcg gggacgctgc acggcacggc acggagcgcg
      121 cgcaggagct cggctttttt cccgttgtcc gcctcgcgca gcgcttcgat cgcgcgactc
      181 acggcggcgg cttcggagcg cgccgggccc tcacctttgg agcaacccgc ggtcgccgcg
      241 agcaacacgc cgagcgcggc gcacgaggag catcgcaacg gtggtgctcg cccgctactc
      301 ggccgccttg ggcggcggac ccatttggat gcgttcgccg acgtacgcac cgatcagcgt
      361 gaagagcacg ccgagcgcgg agaggagcag gtacatgaac gcaggcatcg tcttcacggt
      421 ctgattcgaa tacaggatga aggcggtcgg catcgcgacg aggaacaccg cgatcatggg
      481 ctcgacgaag gtgcgccccg gcgacaccaa gccgatcagc atcccgccga agaaccaaac
      541 ggggatcgag accatcatgc cggccgagcc ctcgaagtcg agggccggca cgaccatggg
      601 caggcccatg acgaacgccg cggtcgtcac gatcatgatc gcgatcgaaa ccaagaacca
      661 cgtcgggctg aaggactctt gttggtagcg ccgttcgagc tcttcctgac gcgtgagcag
      721 cggcttgagc tcttccacct tcgcgccgca cgacgcacag cggtgattgg cgagcggcgg
      781 cgtgttggcg aagccacacg acggacagat gatcttcttg gtcggtttgg ccatcccgcc
      841 gagcaggata gccggctagc gatcgaaggg cgagatcccg aaaaacttta ggatttatag
      901 gctcttatgc taatgcgccc aggtacggaa acctgcgccg ctcccgcgct gtccgtttcc
      961 tcatgcagag ctcctccgaa aatccgagtc agccggcgcc cgaatcggcg aaaaagcacg
     1021 acctcgcgag cctgccggcg ccgcgccggc catggcggcg ggtcacgctc gtcacgctag
     1081 cgctcggagc cttggggtcg ctcgcgctct cgttcgccgt gttgcccgac gtcgtttact
     1141 cgctccacgg cggcgcgccg cgcgacctcg gcgacctcgt ctcggcgcgg ctcgaaccga
     1201 cgctctcgga cgtgtgggtc cacggcgaag ctcagctttc ggcgacgcgc gcgatccgct
     1261 acgcgcgccc gctcgagcac gacacgtacc ggctcgccag cgtcgaaggc aacccgaagg
     1321 tctgggtgca gatccgcgtc cccgcgaacg aagagagccc gcgcttcgtg ccgcccgatt
     1381 cgttcgtcgg tcgcttgctc aaggtgtcgt cgctcggcat tcgccagcgc ggcttgcccg
     1441 acgcagtgag agagagcggt gtcgagccgc cgcccgcgga cgcgtggctg ctcgtcgacg
     1501 gcgagtcgcc tgcggcgctg cgctgggcgt tcggtttgtt cgggctctta ctcgcgttcg
     1561 cgacgttcaa cgtggtcggg ctcgtgcggc tgacgcgtcc gatcccgagc ggcgagccct
     1621 cgacgtgaag aagcgcaaag cttcgcctga cgtcgtcgtg gtcggcggcg gcgtcatggg
     1681 cacggcgagc gcgtgggagc tcgcgcagcg ggggctgtcc gtcgtcgtgc tcgagcggag
     1741 cgtgccgggc gcggaggctt cgagcgccgc ggcggggatt ttgggcgcgc aggtcgagtc
     1801 ccacgcgccg ggacccctcg ccgagttgtc gcgtgcgagc cggcggctct atccggcgtg
     1861 ggtgcgagcg ctcgagcggg cgacgagcgt cgataccggg taccgcgagt gcggcgtgct
     1921 caaggtcgcg tttcgcgccc ccgagctcgg gcgtctcgcg cgtgaagtcg cgtggcagaa
     1981 gccgcggcct cgcgtgcttt cccggcgagc gctcgcgcga cgcgagccga acctcgacac
     2041 gaaactcgcg ggcggcgtcg cgtacgacga cgacgcgcgt gtcgatccac ggcggctgtt
     2101 tcgcgcgctg cacatcgcgg cggcgcgcgc cggcgtcgtc tttcgaagcg gtgcgtacgt
     2161 gcgccgcgtc gtgacgaaag acgggcgggc cgcgggcgtc gcgctcgacg acggcagcgt
     2221 ggtgcgcgcg ccgcacgtgg tcgtcgccgc cggcagctgg acgagtctgg tcgaagggct
     2281 cggcatcgcg cccggcgcgg tgcaaccggt gcgcgggcaa atcgtggagc tcgagacgcc
     2341 cgagccgctc atcacgagcg tcgtgttcgg gccgcgcgcg tacctcgtgc cgcgcgacga
     2401 cgggcgcacg ctcgtcggct cgaccatgga atttgtcggc taccggcgcg aagtcacggc
     2461 cgcggccgta cgcgacttgc tgaccgccgc gatcgagctc gtgccggcgt tcggcgccgc
     2521 gagcctcggg cagagctggt cgaattttcg tccctacacg caggacgagc tgccgttgct
     2581 cggcggcacc gagctgccgg gactctggct cgcgagcggg cactaccgaa acggcattct
     2641 gctcgcgccg atcacggcgg cggtcgtcgc cgcgctcgtc cgcgggaagg cttcgcccgt
     2701 gccgctcgcg ccgttcgcgc ccgcgcgacg cgcgaagtcg taggcgcgcc gcgctggcgg
     2761 gcaggccggg ccacgccccg cgcggttgat gctatgaccc ggcaagctca tgactctcgc
     2821 gctcggcgtg ctcgtctccg gaacggggac gaaccttcaa gccattctcg atgccacgcg
     2881 ggacggctcc ctcgacgcgc gcgtgagctg cgtcatctcg aacaggacgg aggccatggc
     2941 gctcgagcgc gcggcgcggg cgggtgtccc ggccctcgcg atcccgcacc agacgttcga
     3001 cacgcgcgcg gcgttcg
//
LOCUS       DATIML010000566         1550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3002319, whole genome shotgun sequence.
ACCESSION   DATIML010000566 DATIML010000000
VERSION     DATIML010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3002319"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..700)
                     /locus_tag="VLJ38_09725"
     CDS             complement(<1..700)
                     /locus_tag="VLJ38_09725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39839.1"
                     /translation="MQTSWRGRIAFASALGWLLGCSSSNGTPPANDYALEAGGTGSGA
                     TGGTTSTGGSGGTGANGGTTTIMLGSGGASMAGSGGSSSEDPCKSKDCGVGQRCQADG
                     GVASCVDKTCDEVACKDTELCQSAEGGGHICVDKCTSDAACDVALHCDTSTGECLPDD
                     CTPDTRTCGTDDTIRVCSSNGAPGAAIRCGSGGYFMSQCTADAAGSGACTCEDDWDCP
                     PFMTCEAGACVGTGV"
     gene            complement(919..1434)
                     /locus_tag="VLJ38_09730"
     CDS             complement(919..1434)
                     /locus_tag="VLJ38_09730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39840.1"
                     /translation="MGGGPLYFVLSLTAFIVGFLPGLLATWLSMRGELPRTDWWQLLK
                     VVGIARGATALLAGIVVPLAVAVAGLVASYFWSNGKGYAGYVAPALLGGWVMAVEPRW
                     LGSLALASGWTCYFATLAFALPLERGLVRRMNARFATRELAEAAARGIRAAYAVQALV
                     VIVILWEVHWH"
BASE COUNT          274 a          564 c          489 g          223 t
ORIGIN      
        1 ctacgcccgt gccgacgcac gcccccgctt cacacgtcat gaacggcggg caatcccagt
       61 cgtcctcgca cgtgcaggcg cccgaacccg cggcgtcggc ggtgcattgg ctcatgaagt
      121 aaccgccgct accgcagcgg atcgcagcgc ccggcgcacc gttcgagcta cacacgcgga
      181 tcgtgtcgtc ggtgccgcac gtccgcgtgt cgggcgtgca gtcgtccggc aaacactcgc
      241 cggtcgacgt gtcgcagtgg agcgccacgt cgcaggcggc gtccgaagta catttgtcga
      301 cgcaaatgtg cccgccgcct tcggccgatt ggcaaagctc ggtatctttg caggcgacct
      361 cgtcgcacgt cttgtcgacg cagctcgcga cgccgccatc ggcctggcag cgctggccga
      421 cgccgcaatc cttgctcttg cacggatctt cgctgctcga accgccgctg ccggccatgc
      481 tcgcgccgcc ggagccgagc atgatcgtgg tcgtgccgcc gttcgcgccc gtcccgccgc
      541 tgccgcccgt gctcgtggtt ccacccgtcg cgcccgagcc cgtgccgcct gcttccaggg
      601 cgtagtcgtt cgcgggcggt gtgccgttcg acgaactgca cccgaggagc cagccaagcg
      661 cgctcgcgaa agcgatccgc ccacgccacg acgtctgcat ttgtcaggag tctactccag
      721 ccgacgacgc gcgcggacga attgacgctg acgaactcgc gatcacgcca acgaactcag
      781 catgacgaca gttcgcgttt agcgctcaca ccgcgaacca cttttgcaaa tcggattccg
      841 cagtagcagc cattttcgcg cacgctatga atgccaactc ggtgagcgcg cgccaaccgg
      901 agtggcgcgt cccgtcagtc aatgccagtg cacctcccat aaaatcacga tcacgacgag
      961 cgcctggact gcgtaggccg cgcgaatgcc ccgcgccgcc gcttcggcaa gctcacgcgt
     1021 cgcgaagcgc gcgttcatgc gccgcacgag tccacgctcg agcggcagcg cgaacgcgag
     1081 cgtcgcgaag tagcaggtcc agccgctcgc aagcgcgagt gacccgagcc agcgtggctc
     1141 gaccgccatc acccagccac cgagcagcgc gggggcgacg tagccggcgt accccttgcc
     1201 attgctccaa aagtaagaag ccacgagccc ggcaaccgcc accgcaagcg gcacgacgat
     1261 tccggcgagc agcgccgtcg ctccgcgggc gatacccacc accttcaaga gctgccacca
     1321 gtcggtccgg ggcagctcgc cccgcatcga gagccaggtg gcgagcaagc ccggcaggaa
     1381 gccgacgatg aacgcggtga gcgaaagcac gaagtagagc gggccgccac ccatccttcc
     1441 gctcctagca ctcccgtcgg agtcttggag ggccagagca cgatcggcga aagacggaga
     1501 gccttcgcgt gagatggggg cgtcgcggga cgcggcgcag tacgagcggg
//
LOCUS       DATIML010000567         2121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2422863, whole genome shotgun sequence.
ACCESSION   DATIML010000567 DATIML010000000
VERSION     DATIML010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2422863"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            365..631
                     /locus_tag="VLJ38_09735"
     CDS             365..631
                     /locus_tag="VLJ38_09735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39841.1"
                     /translation="MPRGNPAVKLAVTVDADVHAKVLDAAEAEGKSVSAWITQAARRA
                     LLLRDGLAAVTEWEAEHGALTAAELAAARSRIEQKASRRKRSRR"
     gene            628..1008
                     /locus_tag="VLJ38_09740"
     CDS             628..1008
                     /locus_tag="VLJ38_09740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HSU39842.1"
                     /translation="MTPVIYDAGVLIAADRSERRVWAEHRVRLELGLIPLVPAPVVAQ
                     VSRSPKQAQLRRLLRGCEVIAFDERAAHAAGALLGRSRTRDVVDASVATLSIRMHADV
                     ISNDAEDIRRLLAAANAKTSIFDP"
     gene            complement(1042..>2121)
                     /locus_tag="VLJ38_09745"
     CDS             complement(1042..>2121)
                     /locus_tag="VLJ38_09745"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSU39843.1"
                     /translation="IALRAGSSEQTKNLVNPANLAPWDYRESYGLHTLDLAAYLDLDL
                     RFWKKLRISGGARVDFLAVGIENKLAGVVPPVATGALHGSFTNVAGVAPGPRVTVAYE
                     ALPELTPVVSAGQGFRSLDAASLTLCNAPSAAPTRQSRPCSPGVPYSQVTSFEVGLRS
                     AVGQGRFTTTLTAFQTNVDNELVFAVDSGGYETERASKRRGIVGSLLARPTSWLLAST
                     ALSVQTATFDTLVAGTSHYVPNVPALLLRADVNAHGELFRISQQPLTGRAGVGYTLIG
                     GRHVNDNLVSPTDHVLNALASLRYRFVELGLDMYNVLGLKYADETAYFVSNWSLEPGQ
                     QPASAGVHLVAAPPRTTLATLSLYF"
BASE COUNT          367 a          677 c          737 g          340 t
ORIGIN      
        1 ggtgaactcg accgtgagca cgtcgccttc cttgccgctc ggaaagtcac caggcgcctt
       61 gtgaatggcg gtgacttcac tgttggggaa cgtggcggcg tagaagcgcg cagcctgctc
      121 ggcgtccttc tcgaaccaga ggcaaatggt gtttttgggc gtcatcttca tggggtgctc
      181 ctcgtgcgcg gatcatggtt gacgaacgcc gcagtcggta gcgaattccg cgccgtaagc
      241 tcagatcggg ccatcttgcc acggccccgt aacgcccacg tgagacgggg cccacaacgc
      301 tcgacgaagc gccgcctgat ggggcggatt gcaaagcata ctactatggt ggtatggttt
      361 gccgatgccg cgaggaaatc cagccgtcaa gctcgccgtc acggtggacg cggacgtgca
      421 cgcgaaagtg ctcgacgccg ccgaagccga gggcaagagc gtttcggcgt ggatcaccca
      481 ggcggcgcgg cgcgctctgc tgctacgtga cgggctcgcg gccgtcacgg aatgggaagc
      541 cgagcacggt gcgttgacgg cagcggagct cgccgccgca cgctcccgca tcgagcaaaa
      601 agcttcgcgg cggaagcgct cgcggcgatg acaccagtca tttacgacgc gggcgttttg
      661 atcgcggccg accgctccga acgccgcgtt tgggccgaac atcgcgttcg cctggaactg
      721 gggctgatcc cgctggtgcc tgcgcccgtg gtcgctcagg tgagccgctc gccgaaacag
      781 gcacagctaa ggcgcctgct tcgcggttgt gaagtcatcg cgttcgatga gagagcggcc
      841 cacgcagcgg gtgcgttgct cggcaggtcg cgcacccggg acgtggtcga tgcctccgtg
      901 gccacgctgt cgattcggat gcacgctgac gtcatcagca acgacgccga agacattcgc
      961 agactcctag ccgccgcgaa cgcgaagacg tccatcttcg acccgtgaac gcccgctcgt
     1021 ggacgctccc tcccggcgct ctcagaagta gagcgacagc gtggcgagcg tcgtgcgtgg
     1081 cggagccgcg accaagtgca ccccggcgga cgcgggctgt tggccgggct cgaggctcca
     1141 attggagacg aaatacgcgg tttcgtcggc gtatttgagg ccgagcacgt tgtacatgtc
     1201 gagaccgagc tcgacgaagc ggtagcgcag cgacgcaagc gcgttcagca cgtggtcggt
     1261 cggactcacg aggttatcgt tgacgtgccg gccgccaatc agcgtgtagc cgacgccagc
     1321 gcggccggtg agcggctgtt gcgagatccg gaatagctcg ccgtgggcgt tcacgtcggc
     1381 gcgtaacagg agggcgggga cgttcggcac gtaatgcgac gtgccggcga cgagcgtgtc
     1441 gaacgtcgcc gtctgcaccg acaacgcggt cgaggcgagc agccacgacg tggggcgcgc
     1501 caagagcgag cccacgatcc cgcgacgctt gctggctcgc tccgtttcgt acccgcccga
     1561 gtccaccgcg aacacgagct cgttgtccac gttggtttga aacgcagtga gcgtcgtcgt
     1621 gaaccgcccc tggccgaccg cggaacgaag ccccacctcg aaactcgtca cttgcgaata
     1681 gggcacgcct ggactgcagg gccgcgactg gcgagtcggt gcggcgctcg gcgcattgca
     1741 caacgtgagg ctcgccgcgt cgagcgagcg aaagccctgc cccgccgaca cgacgggcgt
     1801 gagctccggc agggcttcgt acgccacggt gacgcgcggc ccgggcgcca cgcccgcgac
     1861 gttcgtgaac gagccgtgca aggcgcccgt cgcgaccgga ggcacgacgc cggcgagctt
     1921 gttttcgatg ccgaccgcga gaaagtccac gcgcgcgccc ccggagatgc ggagcttctt
     1981 ccagaaccgc agatcgagat cgaggtaggc ggcgagatcg agcgtgtgca ggccgtagct
     2041 ctcgcgatag tcccacggcg cgaggttggc gggattgacc aggttcttgg tttgctccga
     2101 actgccggcg cgcagagcga t
//
LOCUS       DATIML010000568         4504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3003375, whole genome shotgun sequence.
ACCESSION   DATIML010000568 DATIML010000000
VERSION     DATIML010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4504
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3003375"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..838)
                     /locus_tag="VLJ38_09750"
     CDS             complement(<1..838)
                     /locus_tag="VLJ38_09750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39844.1"
                     /translation="MKSSPSNTTDARDFIARGGGGVALLALAAGALGMAVMVWAFRAE
                     PARAYHSYLTAYVFAVTVPLGALGFTLIAHAANTTWPVAIRRLSEASMAVLPLFALLF
                     VPVVVGAARLYPWAQARQWPEPLASVLAHRRAFMNPRAFTIRAGVYILIWSFFALRLR
                     AVSLRMDTGANAVADSAGLRRLSYGGLVVTSVTVAFAGFDWLMSLAPEFSSTMFGAYF
                     IGICLFAGTAWLVLLLAFADARGFSGPLDDSHYHALGRLLLAFLIFLGYLAFFQYLLC
                     WIG"
     gene            complement(835..1434)
                     /locus_tag="VLJ38_09755"
     CDS             complement(835..1434)
                     /locus_tag="VLJ38_09755"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSU39845.1"
                     /translation="MTACRALALASLALALGGCENPVTAIGFERMLDQPRGKPFKASP
                     YFADGRLMRTPPAGAVPIDGAGSRERTLGLSDNAYVTTLPLAVDRELLQRGRDRFDVY
                     CAACHGATGDGTSIVATHMSLRKPPSLVDEPVRSFPPGRVFQVITDGYGLMPSYAPAL
                     AVDERWAVVAYLRALTLAAHVELGRLPAAVQSRAAEALR"
     gene            complement(1431..2048)
                     /locus_tag="VLJ38_09760"
     CDS             complement(1431..2048)
                     /locus_tag="VLJ38_09760"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HSU39846.1"
                     /translation="MLEPAKKHASELAETGFYAEFASDTAAVDAARRLAERGHAVLDA
                     FTPRPVAALEEVVAPGRSSLNRTVFVWGAIGACTGLGIEWACNAWDYPLNVGGRPPFA
                     LPAYIPITFEAMVLFAALAAFFGFMHRAGLPWLAHPAFDVPGFERASNDRFFLLVERT
                     SDGDEELRALLGELGALSVSPRPALEPPPAGPDAPVVAPSAEPAE"
     gene            complement(2041..3390)
                     /gene="nrfD"
                     /locus_tag="VLJ38_09765"
     CDS             complement(2041..3390)
                     /gene="nrfD"
                     /locus_tag="VLJ38_09765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HSU39847.1"
                     /translation="MSETPVLLGTPTDAELSLQLTRSVWQPPRRAWFALLAISGLGAL
                     GLFSLIAYTFAEGVGLWGNNIPVAWAFAIINFVWWIGIGHAGTFISAILLLLEQSWRT
                     SINRFAEAMTLFAVVQAGIFPVIHLGRPWFAYWLVPYPATMEIWPNFKSALPWDAAAV
                     STYFLVSLMFWYLGLIPDLAVVRDSAPGIWRRRIYGVFALGWRGSVRHLRHYRIAYGI
                     LAGLATPLVLSVHSVVSSDFAITILPGWHSTLFPPYFVAGAIFSGFAMVTTLMVPIRR
                     FFALENVITVRHLDNVAKFTLLTGLIVDFSYLCEFYVAWYSGKAPEEYTFFHAFLAGP
                     NAGVFWTAMVCNVLVPQLYWFPAMRRHPLATLCVAILINVGMWSERFFLIVLSLQRDY
                     SVSAWRAYSPTWVDWGIFAGTLGFFVFLFLLFIKFVPFVPVSEVKELARELAEEGHA"
     gene            complement(3387..>4504)
                     /locus_tag="VLJ38_09770"
     CDS             complement(3387..>4504)
                     /locus_tag="VLJ38_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSU39848.1"
                     /translation="VPAVQRDEPHPVVEVSRAGRRVRGPAVVLDGHADDAISVWLGYG
                     RDGDERLARGVGFDAYPLRTSDAPGFASGASLRRRDERYPLAFTQIEQHSHDRTLALS
                     TTLAAYRAHPDFTAEHKRPLPSIMPEYHFDGPAWAMSIDLTICTGCSACMVACQAENN
                     VLVVGKEQVRRGRVMHWLRIDSYRIGPAKGARFVHQPMMCQHCGDAPCEYVCPVNATV
                     HSPDGLNEMVYNRCVGTRFCSNNCPYKVRRFNWFDWSVHEPANQGQVELQRNPEVSVR
                     ERGVMEKCTYCVQRIRGAEIQARIERREIRPGEVITACAQACPTQALRFDSLTHASTT
                     MVQWRAEPRSYYALHETGARPRTMYLARIDNPNPELT"
BASE COUNT          874 a         1481 c         1543 g          606 t
ORIGIN      
        1 tgccgatcca gcacagcaag tactggaaaa acgcgaggta cccgaggaag atcaagaacg
       61 cgagtaacag ccggccgagc gcgtgatagt ggctgtcgtc gagtggaccg gagaagcccc
      121 gcgcgtcagc gaacgcgagg agcaacacga gccaggccgt gccggcgaac aggcagatcc
      181 cgatgaagta cgcgccgaac atggtggacg agaactccgg cgcgagcgac atcagccagt
      241 cgaagccggc gaacgccacc gtcacggacg tgaccacgag gcccccgtag ctcaaccggc
      301 ggaggcccgc ggagtccgcg acggcgtttg caccggtatc catcctgagc gacacggcgc
      361 ggagcctgag cgcaaaaaac gaccagatca ggatgtacac ccccgcgcgg atcgtgaaag
      421 ctcgtgggtt catgaacgca cggcgatgcg cgagtacgct cgcgagcggc tcgggccatt
      481 gccgcgcttg cgcccacggg tagagccgcg ccgcaccgac tacgacaggc acgaagagca
      541 gcgcaaacag cggcaaaacc gccatactcg cctcgctcaa gcgccgtatg gcgacgggcc
      601 acgtcgtgtt cgcggcgtgc gcgatgagcg tgaagccgag cgcgccgagc ggcacggtca
      661 cggcaaagac gtacgccgtg aggtacgagt ggtaggcgcg ggcgggctcc gcccggaacg
      721 cccacaccat gacggccatc cccaaagcgc ccgcggcgag cgcgagcaga gcaacgcctc
      781 ctccaccgcg cgcgatgaag tctcgcgcgt ccgtcgtgtt gctgggcgag ctcttcatcg
      841 caacgcctcc gcggcgcggc tctggaccgc cgctggcagt cgcccgagct cgacgtgagc
      901 ggcgagggtg agcgctcgga ggtacgcgac gacggcccag cgttcgtcga cggccagcgc
      961 cggagcgtag gaaggcatga gcccgtagcc gtcggtgata acctggaaca cgcgacccgg
     1021 cgggaacgaa cggacgggct cgtccacgag tgacggcggc tttctgagcg acatgtgcgt
     1081 ggctacgatc gacgtaccgt cgcccgtcgc gccgtggcac gcggcgcagt acacgtcgaa
     1141 gcggtcccgt ccgcgctgaa gcagctcgcg gtcgaccgcg agcggaagcg tcgtcacgta
     1201 ggcgttgtcg ctgagaccga gcgtgcgctc ccgcgaaccg gcgccgtcga tcggcacggc
     1261 gccggccggc ggcgtgcgca tgagccgccc gtcggcaaaa tacggcgatg ccttgaacgg
     1321 cttgccgcgc ggctgatcga gcatgcgctc gaagccgatc gcggtgaccg ggttctcgca
     1381 gccgccgagc gcgagggcca agctcgcgag cgccagggcc ctgcacgcag tcattcggcg
     1441 ggctccgcgc tcggcgccac gacgggagcg tcgggcccgg ctgggggcgg ctccagcgca
     1501 ggtctcggcg aaacactgag cgcgccgagc tcgccgagca aagcacgcag ctcctcgtcg
     1561 ccgtcgctcg tgcgttcgac cagcaagaag aagcggtcgt tgctggcacg ctcgaagccc
     1621 ggcacgtcga acgccggatg cgcgagccac ggcagcccag cgcggtgcat gaacccgaag
     1681 aacgcagcga gtgccgcgaa cagcaccatc gcctcgaagg tgatcggaat gtacgcgggc
     1741 agcgcgaacg gcggccggcc cccgacgttg agcgggtaat cccacgcatt gcacgcccat
     1801 tcgatgccga gacccgtgca ggcgccgatg gctccccaga cgaacaccgt gcggttcaag
     1861 ctggagcgcc caggcgccac gacctcttcg agcgcggcga cgggccgcgg cgtgaacgcg
     1921 tcgagcaccg cgtgaccgcg ttccgcgagg cggcgcgcgg catcgacggc cgcggtatcg
     1981 gacgcaaact ctgcgtaaaa acccgtctcc gcgagctcgc tcgcgtgctt cttcgcgggt
     2041 tcaagcatgc ccttcctccg cgagctcccg cgcgagctcc ttcacctcac tcaccggcac
     2101 gaacggcacg aacttgatga acaacaagaa caggaacacg aagaagccga gcgtcccggc
     2161 aaaaattccc caatcgaccc aggtcggcga ataggcgcgc caggcggaaa ccgaatagtc
     2221 acgctggagc gagagcacga tcaaaaagaa gcgctcgctc cacatgccga cgttgatcag
     2281 aatcgcgacg cagagggtcg ccagcggatg ccggcgcatg gcgggaaacc agtagagctg
     2341 cggcacgagc acgttgcaga ccatcgccgt ccagaagaca ccggcgttcg gtcccgcgag
     2401 aaaggcgtga aagaacgtgt actcctcggg cgctttgccg ctgtaccagg cgacgtaaaa
     2461 ctcgcagagg taggagaagt cgacgatcag gcccgtcagg agcgtgaatt tcgcgacgtt
     2521 gtccaggtgc cggacggtga tcacgttctc gagcgcgaag aagcggcgaa tcggcaccat
     2581 caaggtcgtg accatggcaa agccggaaaa gatggcgccc gccacgaagt acggcgggaa
     2641 cagcgtcgaa tgccagcccg gcaagatggt gatcgcaaag tcgctcgaca cgacgctgtg
     2701 caccgagagg acgagcgggg tcgcgagacc cgcgaggatg ccgtacgcga tgcggtagtg
     2761 ccgcaggtgc cgcaccgacc cgcgccagcc gagcgcgaag acgccgtaaa tgcgccgccg
     2821 ccaaattccc ggggcagagt cacgcaccac ggcgagatcc gggatcagcc ccagatacca
     2881 gaacatcagc gagaccaaaa aatacgtcga gacggccgcc gcatcccacg gcaacgcgct
     2941 cttgaagttc ggccagatct ccatcgtcgc cggatacggc acgagccagt aggcgaacca
     3001 cggccggccc aggtggatca ccggaaagat gccggcttgg acgaccgcaa atagcgtcat
     3061 cgcctcggcg aagcgattga tggacgtgcg ccaggactgc tcgagcaaga gcaaaatggc
     3121 cgaaatgaac gtacccgcgt gtccgatccc gatccaccac acgaagttga tgatggcgaa
     3181 cgcccaagcg accgggatgt tgttgcccca gagtccgacg ccttccgcaa acgtataagc
     3241 gatgagcgag aagagcccga gcgcgccgag cccggaaatc gcgagcagtg cgaaccaggc
     3301 tcttcgaggc ggctgccaga cggaacgcgt cagctgcagg ctgagctcgg cgtcggtcgg
     3361 cgtaccgagg aggacgggcg tctcgctcac gtcagctccg ggttcgggtt gtcgatgcgc
     3421 gcgagataca tcgtgcgcgg gcgcgctccg gtttcgtgca gggcgtagta gctgcgcggt
     3481 tcggcgcgcc actgcaccat cgtggtcgac gcgtgcgtga gtgaatcgaa gcgaagcgcc
     3541 tgggtcggac acgcctgggc gcaggccgtg atcacctcac ccggccggat ctcgcggcgc
     3601 tcgatgcgcg cttggatctc ggctccgcgg atgcgctgca cgcaatacgt gcacttttcc
     3661 atgacgccgc gctcgcgcac gctgacctcg gggttacgct ggagctcgac ctggccctga
     3721 ttggccggct cgtggacgct ccagtcgaac caattgaagc gccgcacctt gtagggacag
     3781 ttgttggagc agaagcgcgt cccgacgcag cggttgtaga ccatctcgtt caaaccgtcg
     3841 ggactgtgca ccgtcgcgtt gacggggcag acgtactcgc aaggcgcgtc gccgcagtgc
     3901 tggcacatca tcggttgatg gacgaagcgc gcgcccttgg cggggccgat gcgatacgag
     3961 tcgatgcgga gccagtgcat gacgcggccc cgccgcactt gctctttccc gaccacgagc
     4021 acgttgttct cggcctggca tgcgaccatg cacgcgctgc agcccgtgca aatcgtcaag
     4081 tcgatgctca tcgcccaggc cggcccgtcg aagtggtatt ccggcatgat gctgggcagc
     4141 ggccgtttgt gctccgccgt gaaatccgga tgcgcgcggt aagcggcgag cgtggtcgaa
     4201 agcgcgaggg tccggtcgtg cgagtgttgt tcgatttgcg tgaaggcgag tggataacgt
     4261 tcgtcgcggc gccgcaggct cgcgccgctg gcgaaacccg gggcgtcgct cgtgcggagc
     4321 gggtaggcat cgaagccgac gccgcgcgcg agccgttcgt cgccgtcgcg gccgtacccg
     4381 agccagacgg aaatcgcgtc gtcggcgtgg ccgtcgagaa cgacggcggg cccgcgcacg
     4441 cgccgccccg cgcgactcac ctccacgacc gggtgcggct cgtcgcgctg tacggccggg
     4501 acgc
//
LOCUS       DATIML010000569         3292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_404936, whole genome shotgun sequence.
ACCESSION   DATIML010000569 DATIML010000000
VERSION     DATIML010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404936"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /locus_tag="VLJ38_09775"
     CDS             complement(<1..608)
                     /locus_tag="VLJ38_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39849.1"
                     /translation="MLPERKQILVVDDEPNLRRVLRAQLERDGYDVHTAADGEQALAL
                     LHEHHIDLVITDLRMPKLDGMELLRRITALEDPMPVVMITAHGTVDTAVEALKTGAFD
                     YITKPFDQEDVRTIVRKALRTQDLSATEASRPSLVGGLEGGRYGIIGQSPNLVELYTV
                     LDRVADTPTTVLVTGESGTGKELVARALHENSSRRDKPFIKV"
     gene            841..1683
                     /locus_tag="VLJ38_09780"
     CDS             841..1683
                     /locus_tag="VLJ38_09780"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU39850.1"
                     /translation="MRLHLSGLVGVGALTFASSAFSAEEAHPYPECTHEASDADLTAA
                     KAAFQAGNVSFNEADYPRAILYWEDAFRRDCTAHPLLLNLARAYELNGQKAQAVTALE
                     TFLEREPNSSESAQIQRRIEVLKKQLDAERAAAVPAAVGPATQNPAQTPASTAPAAQN
                     TVVLSEHPKSKSVVPLVVAGVGGAMFIVGGLVFLDASKKVKDFETVCGPQHNQCPLGY
                     DVGPANAAAKRETAGGVVALVGLPIMAGGIIWYLVSSSPSKTATVTPAIAPGFYGVAV
                     NSRF"
     gene            complement(1700..1990)
                     /locus_tag="VLJ38_09785"
     CDS             complement(1700..1990)
                     /locus_tag="VLJ38_09785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39851.1"
                     /translation="MSVSRAPVSSFCAPARGLGIAAFGLLLALAVMSCGGSSSETPPP
                     LEPTPSNVRYDRSATTTLPGEIATPTHAAPPPSATAAAPAPKRLRPPSSSQY"
     gene            2217..2654
                     /gene="ruvA"
                     /locus_tag="VLJ38_09790"
     CDS             2217..2654
                     /gene="ruvA"
                     /locus_tag="VLJ38_09790"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HSU39852.1"
                     /translation="MREDALDLFGFPTELDRRVFRLLLSIPNVGPKTALGVLSALSVS
                     ELSRAIGAGDLARLSKVPGIGKKTAERFVLELKDKLPSVAEGDAAPPPRGPVSDAKQR
                     LMSALTNMGYRAGEAERAVDSLGSKVEAAPIGELLKDALARLG"
     gene            2803..>3292
                     /locus_tag="VLJ38_09795"
     CDS             2803..>3292
                     /locus_tag="VLJ38_09795"
                     /inference="COORDINATES: protein motif:HMM:NF024637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HSU39853.1"
                     /translation="MITCPKCGKENQDHYKFCLGCGAELPRGGAAAKPFTSNTPPHGI
                     PAAQARPVAASAPEVGAPPPPAAPAQAAPRPATPGTPSGAPPAAAAAPNMVSCPQCGH
                     SNVLGNRFCASCGYNLSALSGAQAVPAVAAPAAVAAGGARSITLTALRADGTEAGQYR
                     LPD"
BASE COUNT          513 a         1111 c         1145 g          523 t
ORIGIN      
        1 ttcaccttga tgaacggctt gtcgcggcgc gacgaattct cgtgcagcgc gcgtgcgacg
       61 agctctttgc ccgtgccgct ctcgcccgtc acgagcaccg tggtcggcgt gtctgcgacg
      121 cgatcgagca cggtgtagag ctcgaccagg ttcgggctct gcccgatgat gccgtagcga
      181 ccgccctcga ggccgccgac gagcgacggc cgcgacgcct cggtcgcgga cagatcttgc
      241 gtgcgcagcg ccttgcgcac gatcgtgcgc acgtcctcct ggtcgaaggg cttggtgatg
      301 tagtcgaagg cgcccgtctt gagggcttcc acggcggtat cgaccgtgcc gtgcgccgtg
      361 atcatcacga cgggcatggg atcttcgagc gccgtgatgc gccgcaagag ctccatgccg
      421 tcgagcttcg gcatgcgcag gtcggtgatg acgaggtcga tgtggtgctc gtggagcagc
      481 gcgagcgcct gctcgccgtc cgccgccgtg tgcacgtcgt agccgtcgcg ctcgagctgc
      541 gcccggagca cgcgcctgag gttcggttcg tcgtcgacga ccaggatctg tttgcgctcg
      601 ggcagcatca gcctactcgt cgtgcgttat ccgtgcggct cgcctgttgt gggcaatccg
      661 gagcgacggg ccgacagcga tcgggggtcg catcgttcga gtcggcaaga gagcgcggat
      721 ccctgcttgg cacaaggggc agagcagccg ccgcggcaaa gaaggaggtc ggcgctggcg
      781 gtttcatgct accaagattc tgtggctcga ctgcggtcgc cagactcatc cagaagtcgc
      841 atgcgtctcc acttgagcgg actcgtcggg gtcggggcgc tcacctttgc ctcgtctgct
      901 ttcagcgccg aggaagctca cccgtacccc gagtgcacgc acgaggcgag cgacgcggat
      961 ctgacggccg ccaaggcggc ttttcaggcc ggcaacgtct ccttcaacga ggcggattat
     1021 ccgcgcgcca tcctgtattg ggaggatgca ttccgtcgag attgcacggc gcaccctctg
     1081 ctcttgaact tggcgcgcgc ctacgagctc aacggacaaa aggcgcaggc cgtcacggca
     1141 ctcgaaacct tcctcgaacg ggagcccaac tcgagcgaga gcgcgcagat ccagcggcgt
     1201 atcgaggtgc tgaagaagca gctcgacgcc gagcgggccg ccgcggtgcc agccgccgtc
     1261 gggcccgcaa cgcagaaccc ggcgcagaca ccggcctcca ccgcgcctgc cgcacagaac
     1321 accgtcgttc tgagcgagca ccccaaatca aagagcgtcg tccccctagt cgtcgccggt
     1381 gtcggtggcg ccatgttcat cgtcggcggc ttggtatttt tggacgcgtc caagaaggtc
     1441 aaagacttcg agacggtttg cggcccgcag cacaaccagt gcccgcttgg gtacgacgtt
     1501 ggccccgcca atgccgcggc caagcgcgaa actgccggcg gcgtggtagc gctcgttggc
     1561 ctgcccatca tggccggcgg tatcatctgg tacctggttt cgagctcacc gtcgaagacc
     1621 gccacggtga cgccggcgat cgctcccggc ttttacggcg tcgccgtcaa ttcgcggttc
     1681 tgacgcgcgc cgccgcgcgt cagtactgcg aggagctcgg cgggcgcagg cgcttgggcg
     1741 cgggcgccgc ggcggttgcc gacggcgggg gcgccgcgtg cgtcggggta gcgatttcac
     1801 cgggcagcgt cgtcgtcgcc gagcgatcgt agcggacgtt cgacggcgta ggctcgagcg
     1861 gcggcggtgt ttcgctcgat gaaccgccgc agctcatgac cgcgagcgcg agcagcagcc
     1921 cgaacgcagc gatgccgagc ccgcgcgcgg gagcacagaa tgacgaaacc ggcgcgcggc
     1981 tgaccgacac ggagcccgga tagcacgaaa cccgtccccg cgtggcccga ggcgctgcgt
     2041 gtagtatgcc gtccaaagat gatcggttgg cttcgcggac gcgtcgtggc cgaggagccg
     2101 accggcgtcc tcgtggtcga tgtgggcggc gtgggttacg aagtgaatgc gccgctcggg
     2161 gcgatgggcc gagcggcggc cgtcaatggc gagctcgagt tcttcgtcca acccacgtgc
     2221 gtgaggacgc cctcgacctc ttcggcttcc cgacggagct cgatcgccgc gtcttccgcc
     2281 tcctgctcag catcccgaac gtcggcccga aaaccgcgct cggcgtcttg agcgcgctgt
     2341 cggtgagcga gctcagccgc gctatcgggg cgggcgatct ggcgcggctc tcgaaggtgc
     2401 cgggcatcgg gaaaaaaacg gccgaacgct tcgtgctcga gctcaaagac aagctgccga
     2461 gtgtggcgga gggcgatgcg gcgccgccgc cgcgcgggcc cgtgtccgat gccaagcagc
     2521 gcctcatgag cgcgctcacg aatatgggct accgcgccgg tgaggccgaa cgggcggtcg
     2581 acagcctcgg ctcgaaggtc gaagcagcgc cgattggcga gctcctgaag gacgcgctgg
     2641 ctcgcctcgg ctgaccgacc ggggcacgtg ccataacttg acggagtgcg cggagttcgg
     2701 ggctcttgac cccccagagc gagcatgggt agatccgcta ctgacgcgtg gaggcccctg
     2761 cgacgggcag ccctcagacg tgtctgcggt cggaggctca acgtgattac ctgtccgaag
     2821 tgcggcaagg agaaccagga ccattataag ttttgcctgg ggtgcggagc cgagctgccg
     2881 cggggcggcg ccgctgcaaa gccattcacg tcgaacacac caccgcacgg cattccagcg
     2941 gctcaggcgc gccccgtagc cgcttcggct ccggaggtcg gagcaccgcc gcctccagcg
     3001 gcgccggccc aagcggcacc gcgacccgcg acgccaggca cgccgtcggg cgctccgccc
     3061 gcggcggccg cggcgcccaa catggtgagc tgcccgcaat gcggccacag caacgtgctc
     3121 ggtaaccggt tctgcgcctc gtgcggctac aacctctcgg cgctctcggg tgctcaggcg
     3181 gtacctgccg tcgccgcgcc ggccgccgtc gctgcgggcg gcgctcgctc catcacgctc
     3241 acggcgctgc gcgccgacgg caccgaagcc ggacaatacc gtctcccgga cg
//
LOCUS       DATIML010000570         3297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3291691, whole genome shotgun sequence.
ACCESSION   DATIML010000570 DATIML010000000
VERSION     DATIML010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3297
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3291691"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1545
                     /locus_tag="VLJ38_09800"
     CDS             <1..1545
                     /locus_tag="VLJ38_09800"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF036799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HSU39854.1"
                     /translation="VPSALAGVMGGQDSEIRATTRRVLLECAYFQPRGVRRTARRHGL
                     HTESSHRFERGVDFGAVPAVLERAKELLAELSGGSIVAGAIHARGPEVVPARIRLRAS
                     RLDTLLGVPVPFEPAVASLERLGFAVASRSGSGDSAAVEVLAASHRPDVTLEVDLVDE
                     VSRLRGLDAIPARLPAVAPQPPRRTGELERRVLEVVQALGLSEALTYAFVDPADLRRL
                     KAPEAAVTLKNPLGEERSVMRTSLLPGLLSSLTRARRRGETRVRLFSLGATFHAPVLA
                     PSDGPRPRLAEDVGSLPSERLELAVLLAGPRLERLVLDPPEVDVYDAKAIAVELVERL
                     AQRAATVENAGAVDGVAHLHPRGAGLVRVGDAVLGRFGPLHPEVIDAFELGGQAQVIE
                     LDLEALERLGTVVPRYRTIPRLPAVTRDVSLVVGEDVQAGRVLGVLARAAGELCESID
                     VAAEFRGGSLPAGSRSLTFRVVYRDPKARLDTGDARTLTDQEVDAVASRMLDAARAEL
                     GAMLRT"
     gene            1542..1898
                     /locus_tag="VLJ38_09805"
     CDS             1542..1898
                     /locus_tag="VLJ38_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39855.1"
                     /translation="MSVGDPPSGRQVALALAVLAFAPACHRKAPGPEECREFAYQALG
                     VRSEADLQVPGALKRVDDFTTECLLTPFDRELLACVAQGLATRLCLRDFDLRHPTNAP
                     VLPSRAERRPREFPFP"
     gene            2108..3085
                     /locus_tag="VLJ38_09810"
     CDS             2108..3085
                     /locus_tag="VLJ38_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HSU39856.1"
                     /translation="MPPLPSLADFPPIFLIVFAVLLGLLFGSFLNVVIHRLPRGESIA
                     FPGSHCPHCGQPIKPRDNVPVLSYVLLFGRSRCCKAPISPRYPLVEAIGGLVAWAVMR
                     SIVLELAPETSIARAMAVFSAYLALALGLVAAAFIDLEHMLLPDEITLGGAGLGIATV
                     PLRADASFRESLLGAAVGFVVVWLPFVFLYSKIRGRPGMGLGDAKLVLLAGAWFGWLG
                     ALFALLAGAVQATAILAAIFATGKKLEEPPAVVEERKALLAALERAEGAEREALEREL
                     AEDPLAKEPEPGLAGARLAFGPFIILAILEFMFYGPVIRSELLSGLSEP"
BASE COUNT          408 a         1182 c         1157 g          550 t
ORIGIN      
        1 gtgccgagcg cgctcgcggg cgtgatgggc ggacaagaca gcgagatccg cgcgacgacg
       61 cgccgtgtgc tgctcgagtg cgcgtacttt caaccgcgcg gggtgcgccg cacggcgcgc
      121 cggcacgggt tacacacgga gtcgagccac cgcttcgagc gcggggtcga tttcggcgcc
      181 gtgcccgccg tgctcgagcg ggccaaggag ctgctcgccg agctgtcggg cggcagcatc
      241 gtcgcgggcg cgattcacgc gcgcggaccc gaagtcgtgc cggcgcgcat tcggctgcgt
      301 gcgagccggc tcgatacgtt gctcggcgtc ccggtcccgt tcgagcccgc cgtggcaagc
      361 ctcgagcggc tcggcttcgc ggtcgcgtcc cgctccggct ccggcgacag cgcggcggtc
      421 gaggtgctcg ccgcgtcgca ccgccccgac gtgacgctcg aggtcgatct cgtggacgag
      481 gtctcgcgcc tgcgcggact cgacgcgatc ccggcgcgct tgccggcggt cgcgccgcag
      541 ccgccgcgcc gcacgggtga gctcgagcgg cgcgtgctcg aggtcgtcca agcgctcggc
      601 ctgagcgagg cgctcacgta cgccttcgtc gatccggccg atttacgccg gctcaaggcg
      661 cccgaagcgg ccgtgacact caaaaatccg ctcggcgaag agcgcagcgt gatgcgcacg
      721 agtctcttgc cgggactcct gagctcgctc acacgcgcgc ggcggcgagg cgaaacgcgc
      781 gtgcggctgt tttcgctcgg tgcgacgttc cacgcgcccg tgctcgctcc gagcgacggc
      841 ccccggccgc gtctcgccga agacgtgggc tcgctcccga gcgaacgctt ggagctcgcc
      901 gtcctgctcg cgggaccacg cctcgagcgg ctcgtgctcg atccgcccga ggtcgacgtc
      961 tatgacgcca aggcgatcgc ggtggagctc gtggagcgcc tcgcgcagcg cgccgccacg
     1021 gtcgagaacg ccggtgcggt cgacggggtc gcccacttgc acccgcgcgg cgcagggctc
     1081 gtgcgcgtcg gcgacgcggt gctcggccgc ttcggcccgt tgcatcccga ggtcatcgac
     1141 gccttcgagc tcggcgggca agctcaggtg atcgagctcg atctcgaggc gctcgagcgg
     1201 ctcggtacgg tggtgccgcg ctaccgcacg attccgcgct tgcctgcggt gacgcgtgac
     1261 gtgtcgctcg tggtcggcga ggacgtgcag gcggggcgcg tcctcggcgt gctcgcgcgc
     1321 gcggccggtg agctctgcga gtcgatcgac gtggccgctg aattccgcgg tggctcgctg
     1381 ccggccggca gccgctcgct cacgttccgc gtggtctatc gcgatcccaa agcgcggctc
     1441 gacacaggcg acgctcgcac gctgaccgac caggaggtcg acgccgtcgc gagccgcatg
     1501 ctggacgccg cgcgcgcgga gctcggagcg atgctccgca catgagtgtc ggcgacccac
     1561 cgagcggacg gcaggtcgcg ctcgcgctcg ccgtgctcgc gttcgcccca gcgtgccaca
     1621 ggaaggcgcc ggggccggag gagtgccgtg aattcgcgta ccaggcgctc ggcgtgcgga
     1681 gcgaagcgga tttgcaagtc cccggcgcgc tgaagcgcgt cgacgatttc acgaccgagt
     1741 gtttgttgac gcccttcgat cgcgagctcc tcgcctgcgt cgcgcagggc ctcgccacgc
     1801 ggctctgtct gcgcgatttc gacctgcgcc atccgacgaa cgcgcccgtg ttgccgtcgc
     1861 gcgccgagcg ccgcccgcgc gagtttccgt tcccgtgaag cgctgacccc ctccagagcg
     1921 ccgttggagc gcgggagcgg tcgtcgtgac gttgccgtag cacgccgcgg aaggaaggaa
     1981 tccgcccgcg tgcgcgtttc gatcctgcaa aagaccgtct agcaccgcaa cccggatctt
     2041 cgatccgggt tcgcccgctg ccgcgggcgc ctcggcgatt gccgacggtc ggggccgtcg
     2101 tactaccatg ccgccgttgc cctcactcgc cgacttccct ccgatcttcc tgatcgtctt
     2161 cgcggttctc ctcgggctct tgttcggcag cttcttgaac gtcgtgatcc accggctgcc
     2221 gcgcggcgag agcattgcgt ttccgggctc gcattgcccg cattgcgggc agcccatcaa
     2281 gccgcgcgac aacgtgcctg tgctgagtta cgtcctcttg ttcggtcgct cgcgctgctg
     2341 caaagcgccg atctcgccgc gctacccgct cgtcgaggcg atcggcgggc tcgtcgcctg
     2401 ggcggtcatg cgctcgatcg tgctcgagct cgcgcccgag acgtcgattg cgcgcgccat
     2461 ggccgtcttc tccgcgtacc tcgcgctcgc gctcggcttg gtcgcggcgg cgttcatcga
     2521 tctcgagcac atgctcttgc cggacgaaat cacgctgggc ggcgctggcc tcggcatcgc
     2581 gacggtgccg ctgcgcgccg acgcgagctt tcgcgagtcg ctgctcggcg ccgccgtcgg
     2641 cttcgtcgtc gtgtggctcc cgttcgtctt tctttactcg aagatccgcg gccggcccgg
     2701 catgggcctc ggtgacgcga agctcgtgct gctcgcaggc gcgtggttcg gctggctcgg
     2761 cgcgctcttc gccctgctgg cgggcgccgt gcaagccacc gcgatactcg cggccatctt
     2821 cgcgacgggc aaaaagctcg aggagccgcc ggccgtggtc gaggagcgca aagcattgct
     2881 cgcggcgctc gagcgcgccg aaggagccga acgcgaagcg ctcgaacgcg agctcgccga
     2941 ggacccgctc gcgaaggagc cggagcccgg cctcgcaggc gcgcggctcg ccttcggacc
     3001 gttcatcatt ctggcgatcc tcgagttcat gttttacggc ccggtcattc ggagcgagct
     3061 gctctcgggg ctgagcgagc catgaagcgt tcacccgccg gaatttctcg aacgcgacaa
     3121 gccggcgagg ccggacgcgg gcggcctcag gctcgcccgg atcgcccgac ctcggcggtc
     3181 gagcttcggc aatttctcgc gctactactc atgggatgtg ctgcgagcac gccggttgtg
     3241 ccgaagggtc cgcatccacc tcacattcaa gagttcgtgg cggtcgccta cccgccc
//
LOCUS       DATIML010000571         3231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_116138, whole genome shotgun sequence.
ACCESSION   DATIML010000571 DATIML010000000
VERSION     DATIML010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3231
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116138"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VLJ38_09815"
     CDS             <1..957
                     /locus_tag="VLJ38_09815"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSU39857.1"
                     /translation="AVFTMLMAGITFQPTYRVYVSFQNPGGLTTGAPVRISGVKVGRV
                     SDIDFLGAEPGQAAQPDALIRVTAKIETRYASAIHEDARWFVTAQGVLGEMFLAVEPG
                     SAARPLLREGAQVHGVSPPQLDLLLSESYELLHRAYRGLKENEGKIGETFDGLHRTLG
                     LAGDALERNEPKLDHIVSNAETLSTTAVETLKAARERYVDGPQIKHILDNVQHGSEIA
                     AHDLGPLVSDGRELVGDAKKITRVFASEQELARVEGMTRDLGDAAKSAKSAAADAQTL
                     VSRVKQGHGTAGALLRDEALYDDLSELVRDLKHNPWKLIWKE"
     gene            complement(990..1244)
                     /locus_tag="VLJ38_09820"
     CDS             complement(990..1244)
                     /locus_tag="VLJ38_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39858.1"
                     /translation="MCFGRGLVSVVAVLALYGCAGREDAAGPGQDCYRDDDCKDGFVC
                     VANAQGNRVCSKDVTSLASTVEAPPPPPDAGTSPDDAGAP"
     gene            complement(1269..1481)
                     /locus_tag="VLJ38_09825"
     CDS             complement(1269..1481)
                     /locus_tag="VLJ38_09825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding carrier protein"
                     /protein_id="HSU39859.1"
                     /translation="MPKVTAPVTGTVWKIQVAPGDSVEEGQTLVILESMKMEMPVEAP
                     ERGTVAAVAVTEGQAIEEGDVLVSLE"
     gene            1781..2551
                     /locus_tag="VLJ38_09830"
     CDS             1781..2551
                     /locus_tag="VLJ38_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39860.1"
                     /translation="MAEQKESSVLFSLKELMSLEENRIKEEEQERDRRARAEAERRAR
                     EEADRRAAEEARLRAEEETRRAEEQRKREEATRLEAIRHGEIEKAKAEAEHQARMQQL
                     AAQQAHEHQLAALHQDQSKKRLKLIVGIVSAVLVIGIGVGVTLAMKSAERERQLQAAQ
                     LAEMQKHEAEMKQLKADIDAAQRKQDELQNSLANAKDEATKKALEAQLAQAKADTDAK
                     KAQSVGGGSRGGGSRSSGDRPHKSNSNCAPGDPMCGDL"
     gene            2589..>3231
                     /gene="pyrF"
                     /locus_tag="VLJ38_09835"
     CDS             2589..>3231
                     /gene="pyrF"
                     /locus_tag="VLJ38_09835"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001273.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HSU39861.1"
                     /translation="MQSARDRLAFPLDYPTLAEARRGAERVVGSAGVLKVGLELFVRE
                     GPAAVRLGEELGAAIFLDLKLHDIPETVERAVASAVGLGVRYLTLHAAGGPRMLEGAA
                     RRVEREGGKLTLLAITVLTSLDDADLRATGCNDGTAAQALRLGKLAVGSGVRGLVCSA
                     AEVGQLRAAVGPDVVLVTPGIRSAVAAGGDDQKRVGTPGDAIRSGSSVLVVGRP"
BASE COUNT          594 a         1090 c         1064 g          483 t
ORIGIN      
        1 gccgttttta cgatgctcat ggccggcatc accttccagc cgacgtacag ggtgtacgtc
       61 tcgttccaaa atccgggcgg gctgacgacc ggagcgcccg tgcgtatctc gggcgtcaag
      121 gtcgggcgcg tgagcgatat cgactttctc ggagcggagc ccggccaggc cgcgcaaccg
      181 gacgcgctca tccgcgtcac cgcgaagatt gagacccgct acgcgagcgc cattcacgag
      241 gacgctcgct ggttcgttac ggcgcaaggg gtgctcggcg agatgttcct cgccgtggag
      301 ccgggctcgg cggcacgccc gttacttcgc gaaggcgcgc aggtccacgg cgtgagcccg
      361 ccccagctcg atctgttgct cagcgaaagc tacgagcttt tgcaccgcgc ttaccgcggg
      421 ctgaaggaaa acgagggcaa aatcggcgaa acgttcgacg gactccaccg cacgctcgga
      481 cttgcagggg acgcgctcga gcggaacgag ccgaagctcg atcacatcgt gtcgaacgcc
      541 gaaacccttt ccaccacggc cgtggaaacc ctgaaagccg cgcgcgagcg ctacgtggac
      601 ggcccgcaga tcaagcacat cctcgacaac gtccagcacg gctccgagat agccgcccac
      661 gatctcgggc ccctcgtgag cgacggacgt gagctcgtgg gtgacgccaa gaaaatcacg
      721 cgcgtcttcg cgagcgaaca agagctcgct cgcgtcgagg gcatgacgcg cgacctcggc
      781 gacgcggcca aaagcgccaa atcagccgcc gccgacgcgc agacgctcgt gagccgcgtc
      841 aagcaggggc acggcacggc cggtgccctg ctgcgagacg aggcgctcta cgacgatctc
      901 agcgagctcg tgcgcgacct caagcacaat ccctggaaac tgatttggaa ggagtgagcg
      961 cgctgtcgat tcgggaagaa gtgcgcgcgc tagggtgcgc cggcgtcgtc cggcgatgtt
     1021 cctgcgtccg gcggaggcgg cggcgcctcg accgtggacg cgaggctcgt cacgtccttg
     1081 ctgcagacgc gattgccttg agcattggcg acgcagacga atccgtcttt gcagtcgtcg
     1141 tcacgatagc aatcctgccc cggtcccgcg gcgtcctccc tgccggcgca gccgtagagc
     1201 gcgagcacgg caaccacgct gaccagcccg cgcccaaagc acatgcgacg aattctagcc
     1261 gagctcgttt actcgagcga gaccagaacg tccccttctt cgatggcttg cccctcggtc
     1321 acggcgacgg ccgccaccgt tccccgctcg ggcgcctcga ccggcatctc catcttcatc
     1381 gactcgagaa tcaccagggt ttgtccctct tccacgctgt ctcccggcgc gacctggatc
     1441 ttccacacgg ttccagtcac cggcgcggtc actttcggca tgcggtgagc ctaccatccg
     1501 tgctccagcc accgaacggg ctcgagtcag ccgctcgact cgcggaaacg cgaataccaa
     1561 tgacgcgatg tagccggatg tgccgagaag tggtacctac tcgcctccaa ggacggcgct
     1621 agcatgcggg tcgaacgatc tcgtgcaccg gagtgccttg acccgtcaaa actcagggct
     1681 cgagcgcttg acggcatgct ttcgcgattg ctattcgcgg tgtgcgtgct cggattcgcg
     1741 cgggcccgac acgctgccgc gctagattga ggaatcgcct atggccgaac agaaagaaag
     1801 ctccgttctc ttctcgctca aagagctcat gagcctcgag gagaaccgga tcaaagagga
     1861 ggaacaagag cgggaccgcc gtgctcgcgc cgaagccgag cggcgcgcgc gcgaggaggc
     1921 cgatcgccgc gctgccgaag aggcgcgcct gcgagcggaa gaggaaactc gccgtgcgga
     1981 ggagcagcgc aagcgtgaag aggccacgcg cctcgaagcc attcgccatg gcgaaatcga
     2041 aaaggccaaa gccgaagccg agcaccaggc gcgcatgcag cagctcgcgg cgcagcaagc
     2101 gcacgagcac cagcttgccg ccttacatca ggatcagagc aagaagcggc tcaagctcat
     2161 cgtcgggatc gtctccgccg tgctcgtgat cggcatcggc gtcggcgtga ccctggcgat
     2221 gaagtcggca gagcgcgagc gccagctcca agccgcccaa ctcgctgaaa tgcagaagca
     2281 cgaggcggag atgaagcagc tcaaggccga catcgacgcc gcgcagagaa agcaggacga
     2341 gctccagaac tcgctcgcga acgccaagga cgaagcgacc aagaaggccc tcgaagccca
     2401 gctcgctcaa gccaaggccg acaccgacgc gaagaaggcg cagagcgtcg gcggcgggtc
     2461 gcgcggcggc gggtcgcgct cgagcggcga caggccgcac aagtcgaact cgaattgcgc
     2521 ccccggcgat ccgatgtgcg gcgatctctg agcacgtttt cgctcacctc gggtatatcc
     2581 atcgcgccat gcagagcgcg cgtgatcgcc tcgccttccc tctcgattat ccgacccttg
     2641 ccgaagcccg gcgtggcgcc gagcgcgtcg tgggctcggc cggcgtcctc aaggtcggcc
     2701 tcgagctctt cgtgcgggaa ggaccggcag cggtgcgact cggtgaagag ctcggcgccg
     2761 cgatttttct cgatctaaag ctccacgaca tccccgagac ggtcgaacga gcggtcgctt
     2821 ccgctgtcgg actcggggtc cgttacctga cgctccatgc ggccggcggt ccgcgcatgc
     2881 tcgagggcgc ggcacgccgc gtcgaacgtg agggcggcaa gctcaccttg cttgccatca
     2941 cggtgctcac gtcgctcgac gacgccgatc tgcgggccac cggctgcaac gacggcacgg
     3001 cggcgcaggc cctccgcctc ggtaagctcg cggtgggttc cggcgtgcgg gggctcgtgt
     3061 gctcggcggc ggaggtgggc caactgcgcg ccgcggtcgg gccggacgtc gtgctcgtca
     3121 cgcccggcat tcgctccgct gtcgctgccg gcggtgacga ccagaagcgc gtcggcacgc
     3181 cgggcgacgc gatccgcagc gggtcgagcg tactggtcgt gggcaggccc a
//
LOCUS       DATIML010000572         2301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1560520, whole genome shotgun sequence.
ACCESSION   DATIML010000572 DATIML010000000
VERSION     DATIML010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1560520"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="VLJ38_09840"
     CDS             <1..545
                     /locus_tag="VLJ38_09840"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU39862.1"
                     /translation="SAAAPALPLLWGRNFRGTLALSSWVPAALPWVGRRLVARYMNKT
                     GLPGVVDDPIRALFGDPARLDAELRERLLGVSGYRLGWVLEAARAYEQATRSLGVALL
                     RPGAAARWISNARCPVQAICGERDPIFMGPAWERLERARPDWHYVVLPGVGHVPQLEA
                     PREVTQCLVDFMAGRSATAE"
     gene            complement(532..768)
                     /locus_tag="VLJ38_09845"
     CDS             complement(532..768)
                     /locus_tag="VLJ38_09845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39863.1"
                     /translation="MSTARELVEVPLDARSVLLCRGHARIAKNSGVRTLRALRELYGS
                     GRRSYVSRRGLGAEPKRSERRSNPGRRATDVTQP"
     gene            995..1312
                     /locus_tag="VLJ38_09850"
     CDS             995..1312
                     /locus_tag="VLJ38_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSU39864.1"
                     /translation="MSAARAHSDVFRAIADPTRRAILDRLRAGPAPVNALASDFEQTR
                     PAISKHLRVLREASLVTERRVGRERLYELKPRPLQQVAGWVEGYRAFWQVSLNNLKRY
                     LEE"
     gene            1316..1798
                     /locus_tag="VLJ38_09855"
     CDS             1316..1798
                     /locus_tag="VLJ38_09855"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSU39865.1"
                     /translation="MSTLKRSAARAIADVAQGMLLATIDISATPERVFRAVTSEELTR
                     WWGSEDTYRTTKWSGDVRVGGTWRTEGIGRDGKPFSVHGEFIDVEPPRKLVQTWRYDW
                     DPTESVTTITWRFEPIEGGTRVIVRHEGFGEAQAACENHASGWERVLGWLSANFQVAA
                     "
     gene            1906..>2301
                     /locus_tag="VLJ38_09860"
     CDS             1906..>2301
                     /locus_tag="VLJ38_09860"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSU39866.1"
                     /translation="MQPRIKNPVFLIPDLYKALMALNGAVQKTGFSHQTQELVNMRVS
                     QINGCGACLEFHARELAKLGETNERLLTLAGWRETTYFTPAERAALAFAEAATRLADR
                     GEAVSDEVWAEAARHYSETELAALVVQVGM"
BASE COUNT          384 a          758 c          798 g          361 t
ORIGIN      
        1 tgagcgctgc ggcgcccgcg ctgccgctgc tctggggtcg taacttccgc ggcaccttgg
       61 cgctttcgtc gtgggtgccg gcggcgctgc cctgggtcgg caggcgcctg gtcgcgcgtt
      121 acatgaacaa gacggggctg cccggcgtcg tcgacgatcc gatccgcgcg ctcttcggcg
      181 atccagcgcg cctcgatgcc gagctccgcg agcgactcct cggcgtttca ggctaccggc
      241 tcggctgggt cctcgaggcg gcgcgcgcgt acgagcaggc gacgcgtagc ctcggcgtcg
      301 cactgctgcg gcccggagcg gccgcacgtt ggatttcgaa cgcgcgctgt cccgtccaag
      361 cgatttgcgg cgaacgcgat ccgattttta tgggaccagc gtgggaacga ctcgaacggg
      421 cgcgtcccga ctggcactac gtcgtgttgc ccggcgtcgg gcacgtgcct caactcgagg
      481 cgccgcgaga agtcacgcag tgtctcgtgg acttcatggc gggccgaagc gctacggctg
      541 agtaacgtcc gtcgcgcggc gtccggggtt cgagcggcgt tcggagcgct tgggctcggc
      601 gccgaggccc cgtcgcgaga cgtaggagcg gcgcccgctg ccgtagagct cgcggagcgc
      661 ccgcagcgtg cgcacgccgg aattcttggc gatgcgcgcg tggccgcggc agaggagcac
      721 ggaacgcgcg tcgagcggga cctcgacgag ctcgcgcgcc gtggacacga gctctggcct
      781 gaaaacctcg cagacttcgc agtgctgtgc catgcgccga gggtgcgccg cggcagcgag
      841 cgcggccaag tttcagtcgt gccgcttcga gcggaacctg cagcagacgc gaatgagtta
      901 cgcaatgtgt ctagcttgac agcacaacaa gcagccaata atagaaacgt gtgaacgaca
      961 ggttactctt aggcagccgc caatccgggg ccaattgagc gctgcgcgcg cccactcgga
     1021 cgtgtttcgt gccatcgccg atccgacacg ccgggcgatc ctcgatcgct tgcgcgccgg
     1081 ccccgccccg gtgaacgcgc tcgcgagcga cttcgagcaa acgcgcccag cgatctccaa
     1141 gcacctgcgc gtcttgcggg aagcgtcgct cgtgacggag cggcgggtcg gccgcgagcg
     1201 gctttacgag ctcaagccgc ggccgctgca gcaggtggct ggttgggtcg agggctaccg
     1261 cgcgttctgg caagtgagcc tcaacaactt gaaacggtat ttggaggagt agaggatgag
     1321 cacgctcaaa cgctctgctg cccgagctat cgccgacgta gcgcagggca tgttgctcgc
     1381 gaccatcgac atttccgcca cgccggagcg cgtgttccgc gccgtcacgt ccgaggagct
     1441 gacgcgctgg tggggctcgg aagatacgta ccgcacgacg aagtggagcg gcgacgtgcg
     1501 cgtcggcgga acctggcgca cggagggcat cggacgcgac ggcaagccgt tctcggtgca
     1561 cggcgagttc atcgacgtcg agccgccccg caagctcgtg cagacctggc gttacgactg
     1621 ggacccgacc gaaagcgtca cgacgatcac ctggcgcttc gaacccatcg aaggcggcac
     1681 ccgtgtcatc gtccggcacg aaggcttcgg cgaggcgcag gccgcttgcg aaaaccacgc
     1741 cagcggctgg gaacgcgtgc tcggctggtt gtcggcgaat ttccaagtgg ctgcctgatt
     1801 cgcagagcgg atgtcgatcg gacccgcgtg cccgcgttct tggggcatcg acggccgcgc
     1861 tggcggcgga caagctggaa tccgagcgat tccaaggagg tagccatgca accccgcatc
     1921 aaaaacccgg tctttctcat ccccgacctc tacaaggcgc tcatggccct gaacggtgcc
     1981 gtccaaaaga cgggcttctc gcaccagact caggagctcg tgaacatgcg cgtgagccag
     2041 atcaacggct gcggcgcgtg cctcgagttc cacgcccgtg agctcgcgaa gctcggagaa
     2101 acgaacgaac gcctcctcac gctcgccggc tggcgcgaga cgacgtactt caccccggcc
     2161 gaacgtgccg cgctcgcgtt cgctgaggct gcgacgcgac tcgccgaccg gggcgaagcg
     2221 gtgagcgacg aagtatgggc cgaagccgcg cgccactatt ccgaaacgga gctcgccgcg
     2281 ctcgtggtgc aggtcgggat g
//
LOCUS       DATIML010000573         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5317177, whole genome shotgun sequence.
ACCESSION   DATIML010000573 DATIML010000000
VERSION     DATIML010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5317177"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VLJ38_09865"
     CDS             complement(<1..403)
                     /locus_tag="VLJ38_09865"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39867.1"
                     /translation="MTYDVLFVDDEPENLTVFEAACTGRFNVLIASSAAQALELLRQH
                     VVFVLLTDQRMPKMTGLELLERVQREYPEVVRMLVTAYADLQTAIDAINRGQVRRYLK
                     KPWQAGELMNALADGVEYYQMRAKLCGLERRL"
     gene            complement(400..>1606)
                     /locus_tag="VLJ38_09870"
     CDS             complement(400..>1606)
                     /locus_tag="VLJ38_09870"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HSU39868.1"
                     /translation="EQRIVERDADEEQRAHSVLVVEDTPDVIRVIRLALHHDFRILAA
                     PDGKKGLELARKHRPTLIVTDLMMPELDGLALTRELRADPATEHIPIVMLTARGDLRD
                     RVEGIETGVNAYLSKPFSSKELIAVVRSQLKQKEATADVLLDQKLDSLQTVAGGLAHE
                     IKNPLNYVQGALAALENDVVRLLDPAATREPPFDPPRVAERTQKMFATARSGVQRIGA
                     TVDLMMRYSREGYTRTTQPYDVFAAVRDVLAVLLPTVGHVLAHDVDLVGEGLVDCVPE
                     ELNQVLTNLIENAIQALPTDGTGRLTIRGRVSDEELALTVKDNGPGIEPEHVARLFTP
                     FFTTKGKHGGSGLGLAIARRVVTALRGSIHVQSQPGAGAAFVVRLPRSTGALYFASEP
                     APLPSEMSS"
BASE COUNT          259 a          512 c          548 g          287 t
ORIGIN      
        1 gcaggcgccg ttcgaggccg cagagcttgg cgcgcatttg gtagtattcg acgccgtcgg
       61 cgagcgcgtt catgagctca ccggcttgcc acggcttctt gaggtagcgc cgcacctgcc
      121 cgcgattgat ggcatcgatc gcggtttgca gatccgcgta agccgtgacg agcatgcgca
      181 cgacctcggg atattcgcgc tgcacgcgtt cgagcagctc gagccccgtc atcttcggca
      241 tgcgttgatc ggtgagcaag acgaagacga cgtgctgccg caagagctcg agcgcctgcg
      301 cggccgagct cgcgatgagc acgttgaagc ggccggtgca cgccgcctcg aacacggtga
      361 ggttctcggg ctcgtcgtcg acgaagagga catcgtaagt catgaggaca tctcgctcgg
      421 tagcggcgcg ggctcggacg cgaagtagag cgctccagtc gagcgcggca gtctgacgac
      481 gaaggccgcc cctgcccccg gttgactctg cacgtggatg gacccgcgga gcgccgtcac
      541 gacgcggcgc gcgatggcga gcccgagccc cgagccgccg tgcttgcctt tggtcgtaaa
      601 gaacggcgta aacagccgcg caacgtgctc gggctcgatg cccggaccat tgtccttcac
      661 cgtgagcgcg agctcctcgt cgctgacgcg gccgcggatc gtgagccgcc ccgtgccgtc
      721 ggtgggcaac gcctggatcg cgttttcgat caaattcgtg agcacctgat tgagctcctc
      781 gggcacgcaa tcgacgaggc cttcgccgac gaggtccacg tcatgcgcga gcacgtggcc
      841 gacggtcggc aacagcaccg cgagcacgtc gcgcactgcc gcgaacacgt cgtacggctg
      901 cgtcgtgcgc gtgtaaccct ctcggctgta acgcatcatc aagtcgacgg tcgccccgat
      961 gcgctgcacg cccgaacgcg ccgtcgcgaa catcttctgg gttcgttcgg cgacccgcgg
     1021 cggatcgaag gggggttcgc gcgtcgccgc gggatcgagc agccgaacga cgtcgttctc
     1081 gagcgccgcg agcgcgccct gcacgtaatt gagcggattt tttatttcat gggcgaggcc
     1141 gcccgcgacc gtttgcagcg aatcgagctt ctggtcgagc aggacgtcgg cggtcgcttc
     1201 tttttgcttt aattgtgagc ggaccacggc gatgagctct ttcgaggaga acggcttcga
     1261 aagataagca ttaacccccg tctcgatgcc ttcgacgcga tcgcgcaagt cgccgcgcgc
     1321 ggtcaacatc acgatcggga tgtgctcggt cgctgggtcg gcacggagct cgcgcgtgag
     1381 ggcgaggccg tcgagctcgg gcatcatcag atcggtcacg atcagcgtcg ggcggtgctt
     1441 gcgcgcgagc tcgaggccct tcttgccgtc gggggcggcg aggatgcgga aatcgtggtg
     1501 gagcgcgagc cggatcacgc gaatgacgtc cggggtgtcc tcgaccacca gcacactgtg
     1561 cgctcgctgc tcctcgtcgg cgtcgcgttc gacgatgcgc tgttcg
//
LOCUS       DATIML010000574         2935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_406355, whole genome shotgun sequence.
ACCESSION   DATIML010000574 DATIML010000000
VERSION     DATIML010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2935
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406355"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /locus_tag="VLJ38_09875"
     CDS             complement(<1..600)
                     /locus_tag="VLJ38_09875"
                     /inference="COORDINATES: protein motif:HMM:NF024904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU39869.1"
                     /translation="MRIRRLDLKAFGSFSGTSLDLSAGAPGGLHVIYGPNEAGKSTAL
                     RAVRDLLFGFEHRTPDAHRHRSEDLRVGGLLEGPDGVVYVERLKRRKDSLLDDKGAPF
                     DEARLRKLLGGVDRDTFTRSFGLDHAELELYGERMLKGEASVGETLFDAGAGGLDVRR
                     LLEKLQAEQEKLYRSRGKQEINRLLEEHAEARRRSQEVWL"
     gene            complement(597..1850)
                     /locus_tag="VLJ38_09880"
     CDS             complement(597..1850)
                     /locus_tag="VLJ38_09880"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair exonuclease"
                     /protein_id="HSU39870.1"
                     /translation="MPKLVHAADLHLDSPLVGLERYEGAPVGELRRATRGALDRLVEL
                     CVSEDAELLLIAGDLFDGNWRDYSTGLFLCERMARLREAGVRVVWLRGNHDAASRLRK
                     HLRLPENVRELSHARPESVFFEELNLVVHGQGFPEQAVLEDLTRRYPAAVSGAVNVGL
                     LHTALDGRPGHDPYAPCTVSALVDRGYDYWALGHVHAHEIVHRAPFIVYPGNLQGRQL
                     REAGPKGAVVVTFDSAKVTGVEHRALDVVRWAKVTVEVGAAATLDEVGDAVQRALVRE
                     SLAASERLLAARVELVGPSALHGTLKADPERVTQTVRAAALDVDAGPVWIERAVVRTR
                     AERFDFDDGIGAAGPLGELGREISALKADPAALGAFLAELPALAELFRKYRPASGADA
                     AAEPGALLEDARELLLARLSELESG"
     gene            complement(2172..>2935)
                     /locus_tag="VLJ38_09885"
     CDS             complement(2172..>2935)
                     /locus_tag="VLJ38_09885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39871.1"
                     /translation="RSRRVRRERSRQRAAARRGLGASLNLRARMAVGSSAALWFLAAC
                     HELPSGVPLANAGGVLEDTGTERDRRPLPRLEAATPPRESKPSLPSPAHGPPPAALEA
                     TLDAGAPDGGIAATDAGSSAASWAGDYLGSDRLVRHFDGEADDVELDDKAHTRVEQSG
                     TTKLVISIVNSASNDVICSLHASAEGSSASLDPGQSCFGDENSTATVTDGHLSLGADR
                     LVLDFNGKVVENDEDDEDGDTLEFRLEYHFDGRRH"
BASE COUNT          474 a         1052 c          962 g          447 t
ORIGIN      
        1 gagccagact tcttgggagc ggcggcgcgc ctcggcgtgc tcttcgagca gtcggttgat
       61 ctcctgtttg ccccgcgagc gatagagttt ttcctgctcg gcctggagct tctcgagcag
      121 gcgacgcacg tcgagcccgc ccgcgcccgc gtcgaacagc gtctcgccga cgctcgcttc
      181 gcccttcaac atgcgctcgc cgtaaagctc gagctccgcg tggtcgagcc cgaagctgcg
      241 cgtgaaggtg tcgcgatcga caccgcccaa gagctttctg agccgagctt cgtcgaaggg
      301 cgcgcccttg tcgtcgagca gcgagtcttt gcgtcgcttg agccgctcga cgtagacgac
      361 gccgtccgga ccctcgagca ggccgccgac gcgcaggtct tcgctacggt gccggtgcgc
      421 gtcgggcgtg cggtgctcga agccgaacag caagtcgcga acggcacgga gcgcggtaga
      481 ttttcccgct tcgttcgggc cgtagatgac gtgcagcccg ccaggcgcgc cggctgacaa
      541 gtcgagggac gtgcccgaga acgacccgaa ggctttgaga tccagccggc ggatcctcat
      601 ccgctttcga gctccgaaag gcgagcgagc aagagctcac gcgcgtcctc gagcagggcg
      661 ccgggctcgg ccgcggcatc ggcgccgctg gcaggccggt acttgcgaaa aagctcggcc
      721 agcgccggca gctccgcgag gaacgcgccg agcgccgcgg gatcggcttt gagcgcgctg
      781 atttcgcgcc cgagctcgcc gagcggccct gccgcaccga tgccgtcgtc gaagtcgaaa
      841 cgctcggcgc gcgtgcgcac gaccgctcgc tcgatccaca ccgggcccgc gtcgacatcg
      901 agcgccgcgg cgcgcaccgt ctgcgtcacg cgctccggat ccgctttgag cgtcccatgc
      961 agcgcgctcg gccccacgag ctcgacgcgc gcggcgagca gccgctccga ggccgccaaa
     1021 ctctcgcgca cgagcgcacg ctgcacggcg tcacccacct cgtcgagcgt cgcggcagcc
     1081 cccacctcga cggtgacctt ggcccagcgc accacatcga gcgcgcgatg ctcgacgccc
     1141 gtcaccttcg cgctgtcgaa cgtgacgacg acggcgccct tcggccccgc ttcgcgcagc
     1201 tgccgcccct gcaaattccc cgggtacacg atgaacggcg cgcggtgcac gatttcatgc
     1261 gcatggacgt gtccgagcgc ccaatagtcg tacccgcgat cgacgagcgc cgacaccgtg
     1321 cacggcgcgt acggatcgtg gcccggtcgg ccgtcgagcg ccgtgtgcaa gagacccacg
     1381 ttcaccgcgc cggaaaccgc cgccggataa cgccgcgtga ggtcttcgag cacggcttgc
     1441 tcgggaaaac cctgaccgtg caccacgaga ttcagctcct cgaaaaacac gctctcggga
     1501 cgcgcgtgcg agagctcgcg cacgttttcc ggcagtctga ggtgcttgcg caggcggctc
     1561 gcggcgtcgt ggttgccgcg cagccacacc acacgcacgc cggcttcccg gagccgcgcc
     1621 atgcgctcgc acaaaaataa acccgtcgaa tagtcacgcc agttgccgtc gaacagatcg
     1681 ccggcaatca agagcagctc cgcgtcttcg ctcacgcaga gctcgaccag gcgatcgagc
     1741 gcaccgcgcg ttgcacggcg gagctcgccg acgggagccc cttcgtagcg ctcgagcccg
     1801 accagggggc tgtcgaggtg cagatcggcc gcgtgaacga gtttcggcac gccggccacc
     1861 gtgtatcacc gctcccgcgg cggcgcagcg taccaatgcc cgcgcacgga cattattcgt
     1921 ccgcggcacg cgaggacttc ggtcctagtg ctagctgggg cgcagcccca gcccgccaaa
     1981 acgcgtaagt cttggaagac cagatcacga tcggcccgag ccgcgagaag ccaacgcgac
     2041 aagccggcga ggccggaccc atgctgccct cgggctcgct cgagtcgccc gacaggaccg
     2101 gtcgagatcc ggcctacaac ggctcagaaa aaaattgact cgtccgttca tgaaacggct
     2161 cgtcaaggaa tctagtgccg acggccgtcg aagtgatatt cgagccggaa ttcgagggta
     2221 tcgccgtcct cgtcgtcctc gtcattttcg acgaccttgc cgttgaaatc gagcaccagc
     2281 cggtcggcgc ccaggctcaa atggccgtcg gtgaccgtcg cggtcgagtt ttcgtcaccg
     2341 aaacacgact gccccggatc gagcgacgcg ctcgagcctt ccgccgacgc atgcaggctg
     2401 cagatcacgt cgttgctggc gctattgacg atggagatga cgagcttcgt cgttccggac
     2461 tgctcgacgc gcgtgtgcgc tttgtcgtcg agctcgacgt cgtccgcctc gccgtcgaag
     2521 tggcggacga gccggtcgct gccgagatag tcacccgccc agctggcggc gctgctaccg
     2581 gcgtcagtcg cggcgatgcc tccgtccggc gcgcccgcat cgagcgtcgc ttcgagagcg
     2641 gcgggcggcg ggccatgcgc cggtgacggc aggctcggtt tcgactccct tgggggcgtg
     2701 gctgcttcca gtcgcgggag cggccggcga tcacgctcgg ttcccgtgtc ttcgagcaca
     2761 ccgccggcat tcgcgagcgg gaccccgctc ggcagctcgt ggcacgccgc aaggaaccag
     2821 agcgccgcgc tcgagccgac ggccatgcgt gcgcgcaggt tcaaagacgc tcccaggccg
     2881 cgacgcgctg ccgcgcgctg ccgagaccgc tcgcgccgaa ctcgacgaga tcgcc
//
LOCUS       DATIML010000575         2369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3292801, whole genome shotgun sequence.
ACCESSION   DATIML010000575 DATIML010000000
VERSION     DATIML010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3292801"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VLJ38_09890"
     CDS             <1..564
                     /locus_tag="VLJ38_09890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39872.1"
                     /translation="SPELWPRAMTEAFGYWPRGWLPSGTGPAASMLQRLTFMFGQPYD
                     ARRLDPVISEGELLAQFGAMHVGLFLHAAELVRRGYAAKLGAPDVIDRPRICADDCNH
                     TRDGAGPVPDHYLLPRHFHDHRITLLNATDNQLWHRDAVDLMHDWLRDHGVHSEKRNY
                     AGYRIQELFWGARAQRDVYPDIRNALL"
     gene            701..991
                     /locus_tag="VLJ38_09895"
     CDS             701..991
                     /locus_tag="VLJ38_09895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HSU39873.1"
                     /translation="MKDINVSELKANLSRYLRLASRGSRIIVKDRNEPIAELGPATPG
                     TESWRDRAAREGRLRLGTQAWSKLEISKLERPVDIQASLRDVREDPSEVRRR"
     gene            972..1388
                     /locus_tag="VLJ38_09900"
     CDS             972..1388
                     /locus_tag="VLJ38_09900"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HSU39874.1"
                     /translation="MKYVDASAVLRVLFSEPGPRISLAAGDRVISSQLVEIETLRAVD
                     RERLLGNLDDQTTAVKRKELGDFLSMLDLAPIDGAVIERAKSPFAVNVRALDAIHVAT
                     AEILTLQAQGEPLEFWTHDARQATAALSRGLVVRGV"
     gene            1678..>2369
                     /locus_tag="VLJ38_09905"
     CDS             1678..>2369
                     /locus_tag="VLJ38_09905"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39875.1"
                     /translation="MPLGSLLVGGRLQVTRKIGEGGMGAVYEAFDAERRTAVALKTIL
                     EPDAVGIYGLKNEFRALADVRHPNLVALHELFFDSDHWFFTMDMVDGEPFDCWVRPRD
                     GLDEARLRSALGQLARAVQVIHRAGKLHRDLKPSNVLVTPSGRVIVLDFGLVADPQLG
                     GLGQTGSGAMLVGTPEYMSPEQAAGGRASAASDFYALGVMTYEALSGQLPYAGTAGEI
                     LAAKQWGDPRPLL"
BASE COUNT          405 a          819 c          764 g          381 t
ORIGIN      
        1 tcgcccgagc tctggccgcg cgcgatgacc gaagcgttcg gctactggcc acgcggctgg
       61 ctaccgagcg gcacgggccc ggccgcgagc atgctgcagc gcctcacgtt catgttcggg
      121 cagccctacg acgcgcggcg cctcgatccg gtcatcagcg agggcgagct cttggcgcaa
      181 ttcggggcga tgcacgtcgg cttgttcttg cacgccgccg agctcgtccg gcgcggctac
      241 gcagccaagc tcggcgcccc cgacgtcatc gaccgcccgc ggatctgcgc cgacgactgc
      301 aaccacaccc gcgacggcgc cggcccggtg ccagatcact accttttacc tcgacacttt
      361 cacgaccatc gcatcacgct gctcaacgcg accgacaatc agctctggca ccgtgacgcc
      421 gtggatctca tgcacgattg gctccgcgat cacggcgttc attccgaaaa gcgcaactac
      481 gccggctacc gcatccaaga gctcttctgg ggcgcgcgcg cccagcgcga cgtctacccg
      541 gacattcgca acgcgctgct ttgaactgtg gaggccctgg aggaagggcg gggcggaggt
      601 ttcgtttttc aaatgccagc tccgagaggc gaacggccca cggaccgcgc caaaaggcgt
      661 tcgggttgcg acaggtccat catggaccca taatcggacc atgaaggaca tcaacgtgag
      721 cgagctcaaa gcgaacctca gtcggtacct gaggctcgcg tcgcgcggtt cacggatcat
      781 cgtgaaagat cggaacgagc caattgccga gctcggcccc gcgacgcctg gcaccgaatc
      841 atggcgcgac cgtgccgcgc gcgagggccg cctccgcctt ggaacacagg cttggtcgaa
      901 gctcgagatt tcgaagctcg agcggcccgt ggacatccag gcgtcgctgc gagacgtgcg
      961 tgaggatccg agtgaagtac gtagacgcta gcgcggttct gcgcgtcctc ttctccgagc
     1021 ccggcccgcg catttcgctc gcggcgggag accgcgtcat atcgtctcag ctcgtcgaga
     1081 tcgagacact gcgagcggtc gaccgggagc gcctgctcgg caacctcgac gatcagacga
     1141 cagccgtcaa gcgcaaggag ctcggcgatt tcttgagcat gctcgacctc gcgcccatcg
     1201 acggagccgt gatcgaacga gcaaagagcc catttgccgt gaacgtacga gccctcgatg
     1261 cgatccacgt cgctaccgcg gagatcctga cgctgcaagc gcagggcgag ccactcgaat
     1321 tctggacgca cgacgcgcgc caggcaacgg ctgcgctgtc gcgcgggctc gtcgtgcgcg
     1381 gcgtttgagt gatatcgccg cagaacggca cgccctctgc tcccgttcta ggtgaccacc
     1441 gtgcttgccg tgcggcacag gctgaaaagc attgccgggg caccgccact ccctgcccgt
     1501 ccgtgcgccc cgccgcggcg gcgtatacta gccgggtgag cggaggcgcg cctgggtcac
     1561 agcaagtcag ccgatgagcc cctcacgctc cacgacgaga gcggccaggt tccctcgttc
     1621 gccagcttca cgcgcgatgc cgccccgggc gcgaggtcgg cctcctcgaa ggcgcgcttg
     1681 ccgctcggca gcctcctggt cggtggccgt ctccaggtca cgcgcaaaat cggcgagggc
     1741 ggcatgggcg cggtgtacga agccttcgac gcggagcgtc ggacggcggt cgcgctgaag
     1801 acgatcctcg aacccgacgc cgtgggcatt tacggcttga aaaacgagtt ccgcgcgctc
     1861 gccgacgtgc gccatccgaa tctcgtcgcg ctccacgagc tcttcttcga cagcgaccac
     1921 tggtttttca ccatggacat ggtcgacggc gagccgttcg attgctgggt ccgcccgcgc
     1981 gatgggctcg acgaggcccg cttgcgctcg gcgctcgggc agctcgctcg agccgtgcag
     2041 gtcatccatc gcgccggcaa gctgcaccgc gatctcaagc cgagtaacgt cctcgtgacg
     2101 ccgagcggac gcgtcatcgt cctcgacttc ggcttggtcg ccgatccaca gctcggcggg
     2161 ctcgggcaaa ctggttcggg cgcgatgctc gtcggaaccc ccgagtacat gtcgccggag
     2221 caggcagccg gcggccgagc ctcggcagcg agcgatttct atgccctcgg agtgatgacc
     2281 tacgaagcgc tcagcgggca gctcccttac gcgggaacag ccggcgagat cctggcggcc
     2341 aaacaatggg gcgatccgag gccactgct
//
LOCUS       DATIML010000576         2215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_697545, whole genome shotgun sequence.
ACCESSION   DATIML010000576 DATIML010000000
VERSION     DATIML010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_697545"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1270
                     /locus_tag="VLJ38_09910"
     CDS             <1..1270
                     /locus_tag="VLJ38_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoenolpyruvate kinase"
                     /protein_id="HSU39876.1"
                     /translation="TRQPVHTVYGGAHLYRAETTERLGALAMRAFATYARDPRELMTG
                     VGLVQPGAPLDDEFATKLYARVRDKLASEAVEDFRIDFEDGFGARPDAEEDAVAVRVA
                     GEVARAASEGRLSPFIGIRIKSLGEEWTLRAARTVELFLDELLSKTGGVLPPNFVVTL
                     PKVTVPEQPRLLVRLFELLEERHGLPAGTLKLELMIETTQSLFDHEGRLALPGLLAAA
                     RGRCTGAHLGVYDFTAACNVTAAEQRVMHPLCDVARALMTFALAGTGVFLSDGATNVM
                     PVGLHRGDALGATELAENRASVHAAWQLSFRAIRHALASGIYQGWDLHPAQLPVRYAA
                     SYAFFLEGFSAAAERLRNFVATSAQATLVGDVFDDAATGQGLLNYFLRALNSGAIALE
                     DLSHTGLLPAEVELRSFAKILAARRARLGH"
     gene            1341..>2215
                     /locus_tag="VLJ38_09915"
     CDS             1341..>2215
                     /locus_tag="VLJ38_09915"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU39877.1"
                     /translation="MLRLELIAITKDYPGVRANEGVSLKVAPGAIHAVLGENGAGKST
                     LMKLIYGVTEPDAGEIRFDGRPVRIASPEQARKLGIAMVFQHFSLFESLTVAENVWLG
                     LERSHTLAGVTERIREVAATYGLELEPSRPVHALSVGERQRVEIVRALLQRPSLLILD
                     EPTSVLTPQAVDKLFVVLKKLASEGCAILYISHKLHEIRELCTACTVLRGGKVTGDCN
                     PQRETNASLSKMMIGAEPPELEHSDRQPGDVVLEVNELRLPREDQFGIDLDGVSLQVR
                     AGEVVGIAGVSGNGQ"
BASE COUNT          371 a          754 c          729 g          361 t
ORIGIN      
        1 gacgcgacag cccgtgcata ccgtctacgg cggcgcgcac ctctaccgag cggaaaccac
       61 cgaacgtttg ggagcgctcg ccatgcgcgc gttcgcgact tacgcgcgag acccgcgcga
      121 gctcatgacc ggcgtcggtc tggtgcagcc cggcgcgccg ctagacgacg agttcgcgac
      181 gaagctctac gctcgtgtcc gggacaagct cgcctcggaa gccgtcgagg acttccgcat
      241 cgatttcgaa gacggtttcg gcgcgcgacc cgacgcggag gaagacgcgg ttgccgtccg
      301 cgtcgcgggc gaagtagcgc gcgccgcgag cgaaggccgc ttgtcgccgt tcatcggcat
      361 tcgcatcaag tcgctcggcg aggagtggac gctccgcgcg gcgcgcacgg tcgagctctt
      421 tctcgacgag ctcttgtcga agaccggggg cgtcttgccg ccgaacttcg tcgtgacgct
      481 gccgaaggtg acggtgccgg aacagccgcg cctgctcgtg cggctattcg aactgctcga
      541 agaacggcac ggcttgcctg ccgggacgct caagctcgag ctcatgatcg agaccacgca
      601 gtcactcttc gatcacgaag ggcgactcgc gctcccgggg ctcctggccg cggcacgagg
      661 tcgctgcacg ggcgcccatc tcggggtcta cgatttcacc gcggcctgca acgtcaccgc
      721 cgccgaacaa cgcgtcatgc acccgctctg cgatgtcgcg cgcgctctca tgacgtttgc
      781 gcttgcaggt acgggcgtgt tcctctcgga cggcgcgacc aacgtcatgc ccgtcggact
      841 gcaccgtggc gatgcgctgg gcgcgacgga gctcgccgaa aatcgagcga gcgtgcacgc
      901 tgcttggcag ctctcgttcc gtgcgattcg ccacgcgctc gccagcggca tctaccaggg
      961 gtgggacttg cacccggcgc agctgcccgt gcgctacgcc gcttcttacg cgttcttcct
     1021 ggagggattt agtgccgcgg ccgaacgctt gcggaacttc gtcgcgacgt ccgcgcaggc
     1081 gacgctcgtg ggcgacgtgt tcgacgacgc ggcgaccgga caagggctcc tcaattactt
     1141 cctgcgcgct ctgaattccg gcgctatcgc gctcgaagac ctctcccaca ccggcctgtt
     1201 gcccgccgag gtcgaattgc gttctttcgc gaagattctc gccgcgcgtc gtgcacgcct
     1261 cgggcactga agcgcctcag gaccggtgca cgaaacgcgc cggacacgcg agcacggcga
     1321 gccttcgagc gagctgccgc atgctgcgcc tcgagctcat cgcgatcacc aaggactatc
     1381 ccggggtgcg cgccaacgaa ggcgtgagcc tgaaagtcgc acccggagca atccacgccg
     1441 tgctcggcga aaacggtgcc ggcaaatcga cgctgatgaa gctcatctac ggcgtgaccg
     1501 agccggacgc gggcgagatc cgcttcgacg ggcgccccgt acgcatcgcg agtcccgagc
     1561 aggcgcgcaa gctcggcatc gcgatggtgt tccaacactt ttcgctgttc gaatcgctca
     1621 cggtcgcaga aaacgtctgg ctcgggctcg agcgttcgca cacgctcgcg ggcgtcaccg
     1681 agcgcatccg ggaagtcgcg gcgacgtacg gcctcgagct cgagccgagc cgacccgtgc
     1741 acgcgctctc cgtcggtgag cggcagcgcg tcgagatcgt gcgcgcgttg ctccagcgcc
     1801 catcgctcct catcctcgac gagccgacga gcgtgctcac gccgcaagcc gtcgacaagc
     1861 tattcgtggt gctgaaaaag ctcgcgtccg agggctgcgc catcctctac atcagccaca
     1921 agctgcacga gattcgcgag ctgtgcaccg cgtgcacggt gctgcgcggc ggcaaggtca
     1981 cgggcgactg caatccgcag cgcgagacga acgcgtcgct cagcaagatg atgatcggcg
     2041 ccgaaccgcc ggagctcgaa catagcgacc gtcaaccggg cgatgtcgta ctcgaagtca
     2101 atgagttgcg cctgccgcgc gaagaccagt tcggcatcga cctggacggc gtgtcgctgc
     2161 aggtgcgtgc aggggaagtc gtcggcatcg cgggtgtctc gggcaatggg caaaa
//
LOCUS       DATIML010000577         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1561710, whole genome shotgun sequence.
ACCESSION   DATIML010000577 DATIML010000000
VERSION     DATIML010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1561710"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..686)
                     /locus_tag="VLJ38_09920"
     CDS             complement(42..686)
                     /locus_tag="VLJ38_09920"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSU39878.1"
                     /translation="MARPRPVPLLVAAVLAVGVPAQAERPGRRPPHVPAFNASERQAL
                     LAGATVSRPMHFKRGADGSYIGGVAYQVVNASPARVLAALADPEALPRALPHTERATL
                     VSSDGRSARIELVQGNAPFLATYTVNLEQTANGHGIRFWLDPTRPHDVKDVWGYFRVT
                     PFGKKQSLVTLAVALDLGPGIARLLLSDRVERLILRAPGRIREYVEPVRLTSAR"
     gene            complement(767..>1961)
                     /locus_tag="VLJ38_09925"
     CDS             complement(767..>1961)
                     /locus_tag="VLJ38_09925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39879.1"
                     /translation="YAAMQRQERAALLEAELLSPELRARPDACRAIDAALARATLRDP
                     ELRPRTAEELATAILPWLGDQPSGPRSSRRLMGTLVGLSPSQDLAGWSWIVRQKPRDD
                     VIIQSAAWDTDGHCFAFTPRGPLFWNGQAWVGAGGALVELPRGMVFARRSEAGGWLVG
                     GSAGTLAIFDTDGVRDLAQAPDVRVEFLEGSGRLDDLVTAVGRRPGEAPCLWAMSGGR
                     WLKPLPLPNVASVAGLARLDDLRWLVVGRRVQGGGFAAVYEPMQWALHELGVPATRSF
                     VHAAGSLEREIGLIVGSEGFVVRVDPDGTTTSRVHGEPDLSACALDVLDREWVTSLGT
                     LWTRGYALGEPWRPAWADATWHAPFVSLMADAGLVVAMTADGGIVEGRSLGRSPGQST
                     KPPSR"
BASE COUNT          313 a          702 c          683 g          263 t
ORIGIN      
        1 taagcgttga gcgcgatgac cccgacgcgc gtcagcatgc gtcagcgcgc ggacgtgagc
       61 cgcacgggct cgacgtactc gcggatcctg ccgggcgcgc gcaggatgag ccgttcgacg
      121 cgatcggaga gcaagaggcg cgcgatgccc ggcccgagat cgagcgcgac ggcgagcgtc
      181 acgaggctct gctttttgcc gaagggggtc acgcgaaagt atccccacac gtcttttacg
      241 tcgtggggcc gcgtgggatc gagccaaaag cggatgccgt gaccgttcgc cgtctgctcg
      301 agattcacgg tgtacgtcgc gagaaacggc gcgttcccct gcacgagctc gatgcgagca
      361 ctccgaccgt cgctgctcac gagcgtcgcg cgctcggtgt gcggcaacgc gcgcggcaag
      421 gcttcggggt cggcgagcgc cgccagcacg cgcgcggggc tcgcgttcac gacttggtag
      481 gcgacgccgc cgatgtacga gccgtcagct ccgcgcttga aatgcatggg gcgcgaaacg
      541 gtcgcccccg ctaggagtgc ctgccgttcg ctcgcgttga acgccggcac gtgcggcggc
      601 cggcgacccg gccgctcggc ctgggcagga acgcccacgg cgagcacggc ggcgacgagg
      661 agcggaacgg gtctgggccg cgccatcgga tctcagcgta acgacgatgg gcgcgtttcg
      721 ccagcgtttc gcgaaattcc agccgccccg ctgcaatcca gagggcttaa cgtgacggag
      781 gcttggtcga ttggccggga ctgcgcccaa gcgagcgccc ttcgacgata ccgccgtccg
      841 ccgtcatcgc cacgaccagc ccggcatcgg ccatgagact cacgaacggc gcgtgccagg
      901 ttgcgtcggc ccaggccgga cgccacggct cgccgagcgc gtagccacgc gtccagagcg
      961 tgccgaggct cgtcacccac tcgcgatcga gcacgtcgag cgcacacgcc gatagatcgg
     1021 gctctccgtg cacgcgcgag gtggtcgtgc cgtcggggtc gacgcgcacg acgaacccct
     1081 cgctgccgac gatcaaaccg atttcgcgct cgaggctgcc cgctgcgtgc acgaaggagc
     1141 gcgttgccgg cacgccgagc tcgtggagcg cccactgcat cggctcgtag actgccgcga
     1201 agccgccgcc ttgcacgcgc cgcccgacga cgagccaccg cagatcgtcg agccgggcga
     1261 ggcccgccac actcgcgacg ttggggagcg gcagcggctt gagccagcgc ccgcccgaca
     1321 tggcccagag gcacggcgct tcgccgggcc ggcgtcctac ggccgtgacc agatcgtcga
     1381 gccggccgct gccttcgaga aattcgaccc gaacatcggg cgcctgcgct agatcgcgca
     1441 cgccatccgt gtcgaagatc gcgagcgtgc ccgcggagcc gccgacgagc cagccgccag
     1501 cttcgctccg ccgcgcgaac accatgccac gcggcagctc gacgagcgcg ccgcccgcgc
     1561 cgacccacgc ttgcccgttc caaaacaacg gtccgcgcgg agtgaacgcg aagcagtggc
     1621 cgtcggtgtc ccaggcagcg ctctggatga tcacgtcgtc gcgcggtttt tgacgcacga
     1681 tccagctcca gcctgccaaa tcttgcgaag gggaaagccc gaccagcgtg cccatcaaac
     1741 gccggctcga gcgcggaccc gacggttgat cgccgagcca aggcaggatc gccgtcgcaa
     1801 gctcctcggc cgtgcgcggg cggagctcgg ggtcgcgcag cgtcgcgcgc gcgagggcgg
     1861 cgtcgatggc tcgacacgcg tccggtcgcg cgcgcagctc gggactcaag agctcggcct
     1921 cgagcagcgc cgcgcgctct tggcgttgca tcgccgcata c
//
LOCUS       DATIML010000578         1644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3869012, whole genome shotgun sequence.
ACCESSION   DATIML010000578 DATIML010000000
VERSION     DATIML010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3869012"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..586
                     /locus_tag="VLJ38_09930"
     CDS             17..586
                     /locus_tag="VLJ38_09930"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU39880.1"
                     /translation="MLSILTESLSNASFGIYMPRFSGTIYEVLSAPISAFEIVLGYVG
                     AAATKSVMLGAIIVVTARLFVPFGVEHPLWMLTFLVLTSVTFSLFGFVLGVWADSFEK
                     LQLVPLLVVTPLTFLGGSFYSIHMLPPLWQKITLFNPVVYLVSGFRWSFYGKSDVGVE
                     LSLAMTCVFLVICLLVVRWIFKTGYRLKP"
     gene            complement(587..>1644)
                     /locus_tag="VLJ38_09935"
     CDS             complement(587..>1644)
                     /locus_tag="VLJ38_09935"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional serine/threonine-protein
                     kinase/universal stress protein"
                     /protein_id="HSU39881.1"
                     /translation="TLEELFAGGPVPPAELASLGAATADALHSVHQQGVVHLDVKPGN
                     VVLRRDGRAALIDFGLSHHARFPDLHAEETRFRAGSAPYLAPEQLLGKRDDRRSDIFA
                     LGVLLYEGITGKLPFGEPDTDVRNRFWVDPEPPCAVVAAVAPWLQEIVLRCLEPRADQ
                     RYQSAAHLAFDLRHPEQVVLTSRAQKTQRAGLSSHVRRFLRARAEHGARLRQPAALLH
                     QTPIVLVAVDTEHLEDERHPAIYATVAQLVAQSTDFRLLCLSVLGPTAKAHEHLVRLR
                     HWAEPLGLPKQRLSLHALEADSPAQVIVELAAHNNADLIVLGAPSDGARAWSQSVAAS
                     VTARARCSVHVVRVRRH"
BASE COUNT          252 a          530 c          549 g          313 t
ORIGIN      
        1 cgtgccgggc ttgataatgc tgtcgatttt gaccgagagc ctctcaaatg cgtcgttcgg
       61 gatctatatg ccgcggttct ccggcacgat ttacgaggtg ctctccgctc ccatttcggc
      121 attcgagatc gtcctgggct acgtcggcgc cgcggctacg aaatccgtga tgctcggcgc
      181 aatcatcgtc gtgacggcgc ggctgttcgt gcctttcggc gtcgaacacc cgctgtggat
      241 gctcactttt ttggtgctca cctccgtcac cttcagcttg ttcggcttcg tgctcggtgt
      301 ctgggccgac agcttcgaaa agcttcagct cgtgccgctc ctggtcgtca cgcccctcac
      361 cttcctcggc ggcagcttct actcgattca catgctgccg cccctctggc agaagatcac
      421 gctcttcaat cccgtcgttt acttggtgag cggctttcgc tggagctttt acggcaagtc
      481 cgatgtcggg gtcgagctga gcctcgcgat gacctgcgtc tttctcgtca tttgcctgct
      541 cgtcgtgcgc tggatcttca aaaccggata ccgcctgaag ccgtagtcag tgtctgcgca
      601 cccggaccac gtgcacgctg cagcgcgcac gcgcagtgac gctcgccgcg accgactgcg
      661 accaggcgcg cgcgccgtcc gagggtgcgc cgagcacgat gagatcggcg ttgttgtggg
      721 cggcgagctc gacgattact tgcgccggcg agtcggcctc gagggcgtgc aatgagaggc
      781 gctgtttggg taacccgagc ggctcggccc agtgtcgaag tcgcacgagg tgctcgtgcg
      841 ctttagccgt cggcccgagc acgctcaggc agagcaggcg aaagtccgtg ctctgcgcga
      901 cgagctgagc gacggtcgcg taaatcgcgg ggtgacgctc gtcctcgagg tgctcggtgt
      961 cgacggcgac gagcacgata ggcgtttggt gcagcagcgc agcgggctgc cgtagccgcg
     1021 ctccgtgctc ggcacgggct cggaggaagc gacgcacatg cgacgacaga cccgcgcgct
     1081 gggtcttctg ggcgcgcgac gtgagcacga cctgctcggg atgacgcaag tcgaaggcca
     1141 ggtgcgccgc cgattggtag cgttggtcgg cccgcggctc gaggcagcgc aggacgatct
     1201 cttgaagcca cggagcgaca gccgcgacga ccgcgcacgg gggctctgga tcgacccaaa
     1261 aacgattgcg cacgtcggtg tccggctcgc cgaacggcag cttgccggtg atgccttcgt
     1321 aaagcaggac accgagcgcg aagatgtcgc tgcggcggtc gtcgcgcttt ccaagcagct
     1381 gctcgggcgc taggtacggc gccgaaccgg cccgaaagcg cgtctcttcc gcgtgcagat
     1441 cgggaaaacg cgcgtggtgc gagagtccga aatcgatgag cgccgctctg ccgtcgcgcc
     1501 ggagcacgac gttgccgggt ttcacgtcca ggtgaaccac gccctgctga tgcacgctgt
     1561 gcagcgcgtc ggccgtcgcc gcgccgagcg aggccagctc agccggcggc acgggtccgc
     1621 ccgcgaacag ctcctcgagc gtct
//
LOCUS       DATIML010000579         2031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3869150, whole genome shotgun sequence.
ACCESSION   DATIML010000579 DATIML010000000
VERSION     DATIML010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3869150"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2031)
                     /locus_tag="VLJ38_09940"
     CDS             complement(<1..>2031)
                     /locus_tag="VLJ38_09940"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU39882.1"
                     /translation="TEVLLGEAWLGNGTSQARAAGADAVERDAVFYERLRAAFAELAE
                     GVQVLHAAGRLHRDLKPENVFVRTHSGTVVLLDFGLVAALEQHGSGESTTGHGGASVG
                     GNERANDGKPPVTSSYAYHATQEGTVAGTFAYMAPEQALAQPLTAAADWYALGVMLYE
                     ALTGELPYAGTSREILAQKQGGFPPPPPCARVAGTPADLNELCLELLRREPSDRPAGS
                     DVVRRLGGAVADGKAASATRSVFVGRKRQLAKLLAAFDAAREGATVAHVYGHSGAGKS
                     ALLGRLLGELESNAETLVIAGRCYEQEFIPFKAVDSLMDALTRYLLKLPAAEREALLP
                     AEARVLSRLFPVLGRIVPAAPAGAEVDLLGARARAFAAMRELLTRLAERTRLVLLVDD
                     LQWGDVDSAALIAEVLRPPDAPNLLLVLAYRSEQRATNAALQAMRDVCRQSCGERESE
                     VDVGELGAEDAEELAGTLLPSDERDAVPWILGQAQGSAFLIHELARHVKRGGARRVAE
                     GRTLDDILWERLRALPQDSQKLVSFVAIAGRPVRLRHVQRAAELPALALPVVGSLCQE
                     RLLRTQGTGAATELETFHDRVRESVVQRWPAAELKSYAGALARVIAAANEGDAETIAA
                     LFERAGECGRASGHYAEAVAKAVRALAFEHAERLARKAIELASTDSERAVAY"
BASE COUNT          295 a          716 c          709 g          311 t
ORIGIN      
        1 cgtacgcgac ggcacgctcg ctgtcggtgc tcgccagttc gatcgccttg cgggcgagtc
       61 gttcggcgtg ctcgaaggcc agcgcacgaa cggctttggc gaccgcctcg gcgtaatggc
      121 cgctcgctcg tccgcactcg ccggcgcgct cgaacagcgc ggcaatggtc tcggcatctc
      181 cttcgttcgc cgctgcgatg acgcgcgcca gcgcgccggc gtagctcttg agctccgccg
      241 ccggccaacg ctgaacgacg ctctcgcgca cacggtcgtg aaacgtctcg agctcggtcg
      301 ctgcgccggt gccctgagtg cgcagcaagc gctcttggca cagcgagccg acgaccggga
      361 gcgcgagcgc gggaagctcg gcggcgcgct gcacgtgacg aagtcgcacg ggccgccccg
      421 cgatcgcgac gaagctcacg agcttttgtg agtcttgtgg cagcgcgcgc agacgctccc
      481 acaggatatc gtcgagcgtg cggccttcgg caacccggcg cgcgccgccg cgtttgacgt
      541 gacgagcgag ctcgtgaatc aaaaaagcgc tgccctgcgc ctgcccgagg atccaaggca
      601 cggcgtcgcg ttcgtcgctc ggcaagagcg tgcccgcgag ctcttcggca tcttccgcgc
      661 cgagctcgcc cacgtcgacc tcgctctccc gctcgccgca gctctgccgg caaacgtcgc
      721 gcatggcttg gagcgcggcg ttcgtcgcgc gctgttcgct gcggtacgcg aggaccaaaa
      781 ggagattcgg cgcgtccggt ggtctcaaga cttcggcaat caacgcggcg ctatcgacgt
      841 cgccccactg gagatcgtcg acgagcaaga cgaggcgcgt gcgctcggcg agtcgcgtga
      901 gaagctcgcg catcgcggcg aaggcacggg cgcgagcgcc caacaaatcg acctcggcac
      961 cagcgggagc cgcgggcacg atccgtccga gcacggggaa aagacgcgag agcacgcgcg
     1021 cctccgcggg caggagcgct tcgcgctcgg cggccggcag cttcaggagg taacgcgtga
     1081 gcgcgtccat caagctgtcg acggctttga acgggatgaa ctcttgctcg tagcagcgtc
     1141 ccgcgatgac gagtgtctcg gcgttgctct cgagctcgcc gagcaggcgg ccgagcagag
     1201 cgctcttgcc cgcgcccgag tggccgtaga cgtgcgcgac cgtcgcgccc tcgcgcgcgg
     1261 cgtcgaaggc tgccaagagc ttggcgagct gtcgtttgcg accgacgaac accgagcgcg
     1321 tggcgctggc cgctttgccg tcggcaaccg cgccgccgag ccgccgcacg acgtcgctac
     1381 cagcagggcg gtcgctcggt tcgcgtcgca ggagctcgag gcagagctcg ttcaggtcgg
     1441 ctggtgtccc cgcgacgcgc gcgcagggcg gcggcggtgg aaagcccccc tgcttttgcg
     1501 cgagaatctc gcgcgacgtg ccggcgtacg ggagttcacc cgtgagcgcc tcgtagagca
     1561 tgacgccgag cgcgtaccaa tccgcggcgg ccgtgagcgg ctgcgcgagc gcctgctccg
     1621 gcgccatgta cgcgaacgtt cccgcgacgg tgccctcttg cgtcgcgtgg tacgcgtacg
     1681 agctcgtgac gggcggctta ccgtcgttgg cgcgctcgtt cccgcccacg ctcgcccctc
     1741 cgtgcccggt cgtgctttcg ccggagccgt gctgctcgag cgccgcgacg agcccgaagt
     1801 cgagtagcac gaccgtgccg gaatgcgtgc ggacgaacac gttctcgggc ttgagatcgc
     1861 ggtgcaatcg gcccgcggcg tgcagcactt gcactccttc tgcgagctcc gcgaaggctg
     1921 cgcgcagccg ctcgtagaag acggcgtctc gttcgacggc atcggcgccc gcggcgcgtg
     1981 cctgcgacgt accgttgccg agccacgcct cgcccagcaa aacttcggtc g
//
LOCUS       DATIML010000580         2240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5605228, whole genome shotgun sequence.
ACCESSION   DATIML010000580 DATIML010000000
VERSION     DATIML010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5605228"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VLJ38_09945"
     CDS             <1..709
                     /locus_tag="VLJ38_09945"
                     /inference="COORDINATES: protein motif:HMM:NF014671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HSU39883.1"
                     /translation="TMRTPGHDAELAAGFLLAEGLIRSRADLGGIAHCGRLGEEGAHN
                     TLNVVPGPGVVLDVDALGRARRGTLTTSACGVCGRHLIDDLLEKLAPPPSSERFEHRF
                     IARLTDELRARQPHFERTGGLHAAGVARPDVGFVVVREDVGRHNAVDKTFGRLLLDGQ
                     VPARGAVLVVSGRTSFEIVQKALAAGVAGVVGVSAPSSLAVTTAARFGLLLCGFARGH
                     GFNVYAGAERLVAEPGT"
     gene            752..1588
                     /locus_tag="VLJ38_09950"
     CDS             752..1588
                     /locus_tag="VLJ38_09950"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU39884.1"
                     /translation="MSELVRNVSDTARWVATYRARESARPDALFRDPLAAHLAGERGE
                     AIAKLASPHSAWALITRTKLIDDLVAATVAEGCPRLLDLAAGFDTRPYRLELPTDFSW
                     IEGDLPDLLAEKERLLAGEKPRCRLERRAVDLSDREARARFLAESTEGASDVTVLTEG
                     LVIYLDEALVTELARAFSSCKAVRHWILDFNSPRIMADMVRGMGKLLNQAPLKFAPAS
                     GVGFFENLGWKPREIKPLFHEAARLKRLPLWMRPFSLFPPANPRALGNERWSAVVRFE
                     RA"
     gene            1673..>2240
                     /locus_tag="VLJ38_09955"
     CDS             1673..>2240
                     /locus_tag="VLJ38_09955"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HSU39885.1"
                     /translation="MAIGLRLTRAMNGAWRRWHGRPRQGVDVNARSSFLGTEYGGYAV
                     LPQLLAPSALVYSAGIGEDISFDLALIERFGCVVHGFDPTPRSLAWLKLQDLPPNYSV
                     HAYGLASFDGVASFAPPKNPAHVSHTILGDGPGERLEFPVKRLGTALRELGHERLDLL
                     KLDIEGSEYEVLDDLLANGPLPPQLLVEF"
BASE COUNT          328 a          757 c          761 g          394 t
ORIGIN      
        1 cacgatgcgc acgcccggcc acgacgccga gctcgccgcc gggtttttgc tcgccgaagg
       61 cctgattcgg tcccgcgccg acctcggtgg catcgcgcac tgtggccggc tcggtgagga
      121 aggcgcacac aacacgctca atgtcgtccc cgggcccggc gtggtgctcg acgtggacgc
      181 gctcggccgc gcgcggcgcg gcacgctgac gacctcggcg tgcggcgtgt gcgggcgtca
      241 cctgatcgac gacttgctcg aaaaactggc gcccccgccg agctccgagc gcttcgagca
      301 ccgcttcatc gcgcggctga ccgacgagct tcgcgcgcgc cagccgcact tcgagcggac
      361 gggcggactg cacgcagccg gcgtggcacg gccggacgtg ggcttcgtcg tcgtgcgcga
      421 ggacgtgggg cggcacaacg cggtcgacaa aacgtttgga cgactcttgc tcgacgggca
      481 agtgccggca cgcggggccg tgttggtcgt cagcggccgc acgagcttcg aaatcgtgca
      541 aaaagcgctg gcggcggggg tcgcgggcgt cgtcggcgtg tccgcgccga gctcgctcgc
      601 cgtcacgacc gcggcccgtt tcggcctctt gctctgcggc tttgctcgtg ggcacggctt
      661 caacgtgtac gcgggagccg agcgcctcgt cgctgagccc gggacctgac acgactttac
      721 gcagtgcggc accagcagta gcgtcggcgc gatgagcgag ctcgtccgca acgtttcgga
      781 cactgcgcgt tgggtcgcga cgtatcgcgc ccgcgaatcg gcgcgaccgg acgcgttatt
      841 tcgtgatccg ctcgccgcac atctcgccgg tgagcgcggc gaagccatcg cgaagctggc
      901 gtcgccgcac agcgcgtggg cgctcatcac acgcacgaag ctcatcgacg acttggtcgc
      961 cgcgaccgtc gccgaggggt gtccgcgcct gctcgatctg gcggccggtt tcgacacgcg
     1021 cccgtatcgg ctcgagcttc caacggactt cagctggatc gagggcgatc tgcccgacct
     1081 gctcgccgaa aaggagaggc tactcgcggg cgagaagccg cgctgccgcc tcgaacggcg
     1141 cgccgtcgac ttgtccgatc gcgaggcacg cgcgcgcttc ctcgccgaaa gcacggaggg
     1201 cgcgagcgac gtgaccgtgc tcaccgaagg gctcgtgatt tacctcgacg aggcgctcgt
     1261 caccgagctc gcgcgcgcct tctcgtcctg taaggcggta cggcactgga ttttggactt
     1321 caattcgccc cgcatcatgg cggacatggt tcgcgggatg ggcaagctct tgaaccaagc
     1381 gcccttgaaa ttcgcgccgg cgagcggcgt cggatttttc gaaaatctcg gttggaagcc
     1441 acgcgagatc aaacccctgt tccatgaagc tgcgcgcctg aagcgtttgc cgctctggat
     1501 gcgaccgttc tcgctgttcc cgcccgccaa ccctcgcgcg ctcggcaacg aacgttggtc
     1561 cgccgtcgta cgcttcgagc gtgcctgaag cggctggcac ggcgtgattt catgaaggcc
     1621 gcttcgggac gcaggctgtg cgctggcgtc gagttgagct aggaagggcg caatggctat
     1681 cgggctccgt ctgacgcgag cgatgaacgg cgcgtggcgc cgctggcacg gccggccgcg
     1741 gcaaggcgtc gacgtgaacg ccaggtcgag cttcctcggc accgagtacg gcggctacgc
     1801 cgtgctgccg cagttgctcg ctccgagcgc cctcgtgtat tcagccggga tcggcgagga
     1861 catctccttc gatctcgcgc tgatcgagcg cttcggctgt gtcgtgcacg ggttcgatcc
     1921 gacgcctcgt tcgctcgcat ggctcaagct ccaggatttg cccccgaatt actcggtgca
     1981 tgcgtatggc ctggcgagct tcgacggcgt ggcgtcgttc gccccgccga agaatcctgc
     2041 gcacgtctcg cacaccatcc tcggcgacgg tccgggcgaa cgcttggagt ttcccgtcaa
     2101 gcgcctcggt accgccttgc gtgagctcgg gcatgagcgc ctcgatctct tgaaattgga
     2161 catcgagggt tccgagtacg aggtgctcga cgatctcttg gcgaacggcc ccctgccgcc
     2221 gcaactgctg gtcgagtttc
//
LOCUS       DATIML010000581         6157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_698664, whole genome shotgun sequence.
ACCESSION   DATIML010000581 DATIML010000000
VERSION     DATIML010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6157
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698664"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VLJ38_09960"
     CDS             <1..730
                     /locus_tag="VLJ38_09960"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU39886.1"
                     /translation="GGRVEVSLDTVTLDEEACARFHGLTPGPHARLTVTDEGAGMPPA
                     VLERIFDPFFTTRAEGGGTGLGLAVVHGIVTRSNGAIAVTSEVGRGSTFSIFLPLATR
                     APSERPPAEDAALPGTERVLYVDDERDLTETMQRKLGRLGYRVSTLNSGPGAYGVLRA
                     APEAYDLVITDLTMPDLRGDQLARLVRDLRSDLPIVIFTGSQQEIDTEWVARLGRAAL
                     LAKPVALPALTQLIRRLLDGNSLG"
     gene            complement(749..1090)
                     /locus_tag="VLJ38_09965"
     CDS             complement(749..1090)
                     /locus_tag="VLJ38_09965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39887.1"
                     /translation="MSNASREAPGFSAVVKALSKERGVTFGGKGFGSSGLKADGKIFA
                     MLSARGQFVVKLPKARVDELVTGGIGERFDPGKGRLMQEWLAVRAPPRRWLALAKEAL
                     GFARSSKTARA"
     gene            1155..2144
                     /locus_tag="VLJ38_09970"
     CDS             1155..2144
                     /locus_tag="VLJ38_09970"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU39888.1"
                     /translation="MRILFVGGTGTISSASARRLAREPGKTLSFLLRGKTERPVPEGV
                     EVLQGDVRDPASARAALGRREFDVVVNWVAFTTAHVQADIELFAGRTAQYVFISSASA
                     YQTPPARLPVTESTPLKNPYWAYSRDKIACEELLVRAYREQGFPVTVVRPSHTYDCRS
                     LPVHGGYTVIDRMRRGKPVIVHGDGSSLWVLTHHDDFARGFNGLLGNPHVLGEAFHVT
                     SDELLTWNQIHELLAAAAGVEAKLCHVPSTTIASYDAAWGDSLLGDKTHSMIFDNTKI
                     KRAVPGFSATIPYAAGARETLAWYDANPARRHVDAATDALMDRLVAAQARALG"
     gene            2167..3417
                     /locus_tag="VLJ38_09975"
     CDS             2167..3417
                     /locus_tag="VLJ38_09975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39889.1"
                     /translation="MTTLSRWDAWLTARSTGVRVTVLGLTLAFALVVRLSYVPVSYHD
                     FGWLNRGADYGCDYYSDAYGARTVYNHPLDMYTRRLTEQTRPETYWPKRSVAPYPPAE
                     LLLLAGAHALGEKTGLGLYGVLMLADCVLVALTLAYALRTRWYLFPLVELNVFLAYRF
                     WGIGSFNGLLVLLCLTLGVMLARARPALGILCAVFAVCLKLTPIFFLTNFLRFRRGTA
                     LAAGALLVAGFVLPLFVFENYRYIYGFHATRDIRPVVRALEFVGMHGAHSVTLAAVLG
                     WALPLLLGGAFSLVLLYAQLKLDFTWQDRIGWAAVPFSLLFSLRMLSMRTLFEAMAIP
                     DRRLVRSFWLFGMGLMDMLLRVVDIDRTLRDGIWDACGCVGLFLICRHWLRLIGADAI
                     RADWARRYELLPWLFRAPAPAEVG"
     gene            complement(3522..4898)
                     /locus_tag="VLJ38_09980"
     CDS             complement(3522..4898)
                     /locus_tag="VLJ38_09980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39890.1"
                     /translation="MSAAVVACSGDDDDDTAPAAQTPSDLGQSCTRTADCKSPIVCID
                     QVCEKKGTVSNAGAGNEGTGGSTGGTSATGGKGGSGKAGSSSTGGTTPGPVLGGEGES
                     CTRAADCQTNLRCFNQRCTAGEETGGGGEGGMGPVTPPAPKLGERGETCAVSSDCAGG
                     LACLPASTVGVGVCTVVNAGITPTGNDCAAECREATDCCQLPQSVLTSLAIKSCADLD
                     VLLANVDCDNPGAAASQCFARQVYCSCDKNTWDCSDGLCSYTATCENSGFATNGCPTV
                     SRSGKTLVSTCNDSHCQLAAVDPTCSSDSECDGKGVADDGTDTCSPGECTCYKAAHLC
                     YRKCDVAIDCAPGNMCDGKTHVCMPAPECTADVDCQAAHMNVNNRCGLDGICRLTCDT
                     DLDCNANLLGSLRQVCNADHVCEDIGCTQDAECKSSSVPNVQMFCTPKLAAGEAAGGP
                     SSAITAGK"
     gene            5130..5960
                     /locus_tag="VLJ38_09985"
     CDS             5130..5960
                     /locus_tag="VLJ38_09985"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSU39891.1"
                     /translation="MRRLTASEFCATVVPELAAREVENDVMIGLALRIAAAPVSAPHS
                     VFCVVEAGGKLVGAALRTPPQLVIVTELPDGAARAVAEYFRSIADVPDGASGPRQHGR
                     EVAAFFASFRAGRLEHASDEIIYTLPELDALCERPTPPGAARLATAADAAVLTRFFAE
                     FFREIALPHSPDPAEYAASALARGSAWLWEDGEPRALACWARHMTTGTAIGPVYTAVD
                     SRGRGYGSAVTAALCRDLFAAGRKFVCLHADRRNPESNRVYRALGFQEVASFNVWTVG
                     "
BASE COUNT          922 a         2148 c         1991 g         1096 t
ORIGIN      
        1 cggcggccga gtcgaggttt cactcgacac cgtgacgctc gacgaggagg cgtgcgcgcg
       61 tttccacggc ctgacgccgg gtccccacgc gcgcctgacc gtcacggacg agggagccgg
      121 gatgccgccc gccgtgctcg agcgcatctt cgacccgttc ttcacgacgc gcgcggaggg
      181 cggcgggacg gggctcggtc tcgccgtcgt gcacggcatc gtcacgcgga gcaacggcgc
      241 catcgccgtc acgagtgaag tcggtcgcgg cagtacgttc tcgattttcc taccgctcgc
      301 gacgagagcg ccttcggagc gcccgccggc cgaagacgcg gcactgcccg gcaccgaacg
      361 ggtgctgtat gtcgacgacg agcgggacct caccgagacc atgcagcgca agctcggacg
      421 cctcggctac cgcgtgagca cgttgaacag cggaccgggc gcgtacggcg tattgcgtgc
      481 cgcgcccgaa gcctacgatc tcgtgatcac ggatttgacg atgccggacc tgcgcggcga
      541 ccaactggcg cggctggtgc gcgacctgcg ctcggacctg cccatcgtga tctttaccgg
      601 gtcgcagcag gaaatcgaca cggaatgggt ggcgcggctc ggacgcgcgg cgctgctcgc
      661 aaagccggtc gcgctgcccg cgctcaccca gctcatccgc cgcctgctcg acgggaactc
      721 actcggctga agacctgaga cgcgagcttc acgctcgggc ggtcttcgac gagcgcgcga
      781 aaccgagagc ttctttcgcg agggcgagcc agcgccgcgg cggcgcgcgc acggcgagcc
      841 actcctgcat caacctacct ttgcccggat cgaagcgttc gccgatgccg cctgtcacga
      901 gttcgtccac ccgggccttc ggcagcttga ccacgaattg tcctcgcgcg gatagcatgg
      961 cgaagatttt accgtcggct ttgagcccgg aggagccgaa gcccttgccg ccgaacgtca
     1021 cgccgcgctc cttcgagagc gccttcacga cggctgaaaa cccgggagcc tcccggctcg
     1081 cgttcgacat actcacttca catccgcgcg ccgcggccgc gcgtcaacgc cggcagtgct
     1141 atcgtcgccc ggctatgcgg attcttttcg tcggcggtac cggcaccatt tcttcggcct
     1201 cggcgcggcg cctcgcgcgt gagcccggca aaacgctgag ctttctcctg cgcggcaaga
     1261 cggagcgtcc cgtacccgaa ggcgtcgagg tgctccaggg cgacgtccgc gatccggcgt
     1321 cggcgcgtgc ggcgctcggt cgccgcgagt tcgacgtcgt cgtcaactgg gtcgctttca
     1381 cgaccgctca cgtccaagcg gacatcgagc tcttcgccgg tcgcaccgcc cagtacgtgt
     1441 tcatcagttc cgcgtctgcc tatcaaacgc cgcccgcgcg gctgcccgtc accgaatcca
     1501 cgccgctgaa aaatccatac tgggcctatt cgcgcgacaa gatcgcgtgt gaagagctgc
     1561 tcgtgcgtgc ctatcgcgag caagggttcc ccgttaccgt cgtgcgaccg tcgcacacct
     1621 acgactgccg ctcgttgccc gtgcatgggg gctacacggt catcgaccgc atgcggcggg
     1681 gcaaaccggt aatcgtgcac ggcgacggca gctcactctg ggtgctcacg catcatgacg
     1741 acttcgcacg ggggttcaac ggcctcttgg gcaatccgca cgtgctcggc gaggccttcc
     1801 acgtcacgag cgacgagcta ctcacttgga accaaatcca cgaactgctc gctgcggcgg
     1861 ccggcgtgga ggcgaagctc tgccacgtgc cctcgacgac catcgcgagc tacgacgccg
     1921 cctggggcga tagcctgctc ggcgacaaga cgcacagcat gatcttcgac aatacgaaga
     1981 tcaaacgcgc cgtccccggc ttctcggcga cgatcccgta cgcagcaggc gcgcgcgaaa
     2041 cgctcgcctg gtatgacgcc aaccccgcgc gacgccacgt cgacgcggcg accgacgcgc
     2101 tcatggatcg cctcgtagca gcccaggcgc gcgcgctcgg ctgagtggcc ttcgaccccc
     2161 gcgccgatga ccactctcag tcgctgggac gcatggctca cggcccgctc cacgggcgtc
     2221 cgcgtgaccg tgctcgggct cacgctcgcc tttgcgctcg tcgttcgcct ctcctacgtc
     2281 ccggtgagtt accacgactt cggctggctc aatcgcggcg ccgactacgg ctgcgactac
     2341 tactcggacg cctacggcgc gcgcaccgtt tataaccacc cgctcgacat gtacacgcgg
     2401 cgtctcaccg agcagacgcg cccggagacg tactggccga agcgcagcgt cgcgccgtac
     2461 ccgcctgcag agctgctcct gctcgccggc gcacacgcgc tcggtgaaaa gacggggctc
     2521 gggctctacg gcgtgctgat gctcgctgac tgcgtgctcg tggcgctaac actcgcttac
     2581 gcgctccgaa cacgctggta cttgttcccg ctcgtcgagc tcaacgtgtt tttggcgtac
     2641 cgcttttggg gcatcggcag cttcaacggc ttgctcgtgc tgctgtgctt gacgctcggc
     2701 gtgatgctcg cgcgggcgcg accggcgctc ggtatcttgt gcgcggtatt cgccgtgtgc
     2761 ctgaagctca cgccgatctt ctttttgacg aattttttgc gcttccggcg gggtacggcg
     2821 ctcgccgcgg gcgcgctgct cgtcgcaggt ttcgtcttgc cgctgttcgt gttcgaaaat
     2881 tatcgctaca tctacggctt ccacgcgacg cgcgacatcc ggcccgtcgt gcgcgcgctc
     2941 gagttcgtcg gcatgcacgg cgcgcactcc gtgacgctcg ctgccgtgct cggctgggcg
     3001 ctcccgctct tactcggcgg cgctttctcg ctcgtgctgc tctacgcgca gctcaagctc
     3061 gacttcacgt ggcaagaccg catcggctgg gccgccgtgc cgttctcgct gctcttcagc
     3121 ttgcgcatgt tgtcgatgcg cacgctgttc gaggccatgg cgattcccga tcgtcggctg
     3181 gtgcggtcgt tctggctctt cggcatgggg ctcatggaca tgctcctgcg cgtggtcgac
     3241 atcgatcgta cgctgcgcga cggcatttgg gacgcttgcg gctgcgtcgg gctgttcctg
     3301 atctgccgac attggctcag gctcatcggt gcggacgcga tccgcgccga ttgggcgcgg
     3361 cgctacgagc tcttgccgtg gctcttccgc gcgccggcac cagcggaagt cggctgagcc
     3421 gagccggcgg ccgcgcgtgc tgccgaaaaa gcgcgaggcc cacgacgggt tcgccgtggg
     3481 cctcgcgtgt gagcgcggca ggtgccgcgc ttctcggccg tttacttgcc ggcagtgatc
     3541 gccgaagacg ggccgcccgc ggcctcgccc gccgcgagct tcggggtgca gaacatctgc
     3601 acgttcggca cgctgctgct cttgcactcc gcgtcctgag tgcaaccgat gtcttcgcag
     3661 acgtggtccg cgttgcacac ctgcctgagc gagccgagca ggttcgcgtt gcaatcgaga
     3721 tcggtgtcgc acgtgagcct gcagatgccg tccaggccgc aacggttgtt gacgttcatg
     3781 tgagcagcct ggcaatcgac gtctgccgtg cattcgggcg cgggcataca gacgtgcgtc
     3841 ttgccgtcgc acatgttgcc gggcgcgcaa tcgatggcga cgtcgcattt gcggtagcag
     3901 aggtgcgccg ccttgtagca agtgcactca ccgggcgaac aggtgtcggt accgtcgtcg
     3961 gcgacaccct tgccgtcgca ctccgaatcg ctcgagcagg tgggatcgac cgccgccagt
     4021 tggcagtgac tgtcgttgca ggtcgaaacg agggttttgc ccgaccggct caccgtcgga
     4081 cagccgttgg tcgcaaagcc gctattttcg caggtagcgg tgtacgagca gaggccgtca
     4141 ctgcagtccc aggtgttctt gtcacagctg caatagacct ggcgcgcgaa gcattgactt
     4201 gccgcagcgc cggggttgtc gcaatcgacg ttcgccaaga gcacgtcgag atcggcgcac
     4261 gacttgatag cgaggctcgt gagcacgctc tgcggcagct ggcagcagtc agtcgcctcc
     4321 cggcattccg ccgcgcagtc gttaccggtg ggcgtgatgc ccgcgttcac gaccgtgcac
     4381 acgccgactc cgacggtcga ggcgggcaga cacgcgagcc cgcctgcgca gtccgaggag
     4441 acggcgcacg tctcgccacg ctcaccgagc ttgggcgccg ggggcgtgac cggccccatg
     4501 ccgccttcgc ctccgcctcc ggtctcctca ccggccgtgc agcgctgatt gaagcagcgc
     4561 aggttcgtct gacagtcggc ggcgcgcgtg cagctctcgc cctcgcctcc gagcacgggc
     4621 ccaggcgtcg tgccacccgt gctcgaactg ccggccttgc cggagccgcc cttcccgccg
     4681 gttgcgctgg ttccgccggt ggaaccgccg gttccctcgt tgcccgcgcc cgcgttcgag
     4741 acggtgccct tcttctcgca gacctgatcg atgcagacta tcggcgactt acagtcggcc
     4801 gtgcgcgtgc acgattgtcc gagatcgctc ggcgtttgcg cggcgggcgc ggtgtcgtcg
     4861 tcatcgtcgc cgctacaggc cacgacggca gcgctcatgc ataacgcaat gccaaagagc
     4921 gaaaacaagg atgtgcttct cattcggatg cctccaaaaa gcgccaccct cttccctcgg
     4981 gagcggcgcg gggcggcatc ctacaagcac gcgagccctt tgagcaagcc cgggtcccgg
     5041 ggaatactgc gacgcatgac ccaggtcgcc tcggcgagct ttggattcct gcaaatatct
     5101 gatcgcgagc gggagtaatc atgttcagtg tgagacggct cacagcctcc gaattctgcg
     5161 ccacggtcgt acccgagctc gccgcccgcg aagtcgaaaa cgacgtgatg atcggacttg
     5221 cgctacgcat cgcagccgcg ccggtctccg cgccgcactc ggtgttctgc gtggtcgaag
     5281 caggaggcaa gctcgtggga gccgcgctgc ggacgccgcc gcaactcgtg atcgtgacgg
     5341 agttgccgga cggcgcggcg cgcgccgtcg ccgaatactt ccgcagcatc gcggacgtgc
     5401 cggacggcgc gagcggaccg cggcagcacg gtcgtgaggt cgccgcgttc ttcgcgagct
     5461 ttcgcgcagg acggctcgag cacgcctccg acgagatcat ctacacgctg cccgagctcg
     5521 acgcgctctg cgaacggccg acgccgcccg gcgccgcgcg acttgcaacg gccgccgacg
     5581 ccgccgtgct cacgcgcttc ttcgccgagt tctttcgtga gattgcgcta ccgcactcgc
     5641 ccgatcccgc cgagtacgcg gcgagcgctc tcgctcgcgg ctcggcatgg ctctgggagg
     5701 acggcgagcc gcgggccctc gcctgctggg ctcggcacat gacgaccggc acagcgattg
     5761 gaccggtcta cacggccgtg gattcgcgcg ggcgcggcta cggcagcgcc gtgaccgcgg
     5821 ccctttgccg cgacttgttc gcagccggcc gtaagttcgt ctgtctacac gcggaccgca
     5881 gaaatcctga atcgaaccgc gtctaccgag ccctcggttt ccaagaggtc gcgtccttca
     5941 acgtgtggac cgttggctga agctgcgctc ggcgcgcccg taacctttgc cgccaacatc
     6001 gctcagctcg aggctagagc aaccagccga tccgtaaatg aaacgcaggc agcacggtct
     6061 gaccgacctt cgcgagcgtt tggcgcacct tctcctggtc gggcgccaag tacggctgta
     6121 gcaattccga gggcaagccg gcggcaacga cctgctg
//
LOCUS       DATIML010000582         3672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1277021, whole genome shotgun sequence.
ACCESSION   DATIML010000582 DATIML010000000
VERSION     DATIML010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3672
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277021"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VLJ38_09990"
     CDS             <1..292
                     /locus_tag="VLJ38_09990"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSU39892.1"
                     /translation="GGYSIPPSVTYALLRLLVRGETPENAVKSPRFRFDSNDYALLLD
                     GRFPGAVSADLTRRGETVRTSDATSAVQVLAFTPGGVVGAADPRKGGAALME"
     gene            308..1150
                     /locus_tag="VLJ38_09995"
     CDS             308..1150
                     /locus_tag="VLJ38_09995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39893.1"
                     /translation="MLKSPEPKLGQNAEELDAGWETAVAPPTAPRPGGVSVTPAAVAT
                     DELDDAWGELPVEPLLALRRAEPVTAKPRGTPASQPPLAKSRALPAAERPVAKTPLAV
                     APPVVEKAATAEASAASKPAATAQPSVARAVVPVVPTKPTAPTPAPRALSKKERRALE
                     RKQRAHATQKVSERKQSARAKRREEAQRLAEQRQAARHAAHAALKQRAREEKRATNKP
                     RSKRAAADEGVTLAVPKSGTKREAAAASRTKGRPKKYSGGGYIVALIALITLATGLYA
                     WSKR"
     gene            1225..2403
                     /locus_tag="VLJ38_10000"
     CDS             1225..2403
                     /locus_tag="VLJ38_10000"
                     /inference="COORDINATES: protein motif:HMM:NF022738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3095 domain-containing protein"
                     /protein_id="HSU39894.1"
                     /translation="MSEDFLHAAPEIERFADVIEPHFYRDAPDHWHVVLTDVRGSTKA
                     IEAGRYRDVNALGVASIVAIRNATPDLELPYVFGGDGATLLIPETRRAVCEAALRGVR
                     KLARSAFELELRVGLVPVGELRNAGHGVQVARFRASRFVRLAMLRGSGIAQAERWVKD
                     PIASARYAVSEDGPDAASFEGFECRWQPVPSRRGQIVSFIVQALDATEAERARSYRQI
                     IATLEAALGEGAGHPISLAGLRLGTFFGKYSTEARLRSGATQGDGYRAAAGEARKKSL
                     IGRALMALGASAGGFDGKAYPRELIENSDFRKFDEALRMVLDVSAEQLAAIEAELERA
                     RVEGHLVYGIHRAPSALITCYLRSYQGDHVHFVDGSDGGYALAARQLKAQLLERARSA
                     "
     gene            complement(2437..3279)
                     /locus_tag="VLJ38_10005"
     CDS             complement(2437..3279)
                     /locus_tag="VLJ38_10005"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSU39895.1"
                     /translation="MSACRRVVTLLDAYADGELEPEHVLEMEAHLADCHGCSSRLQLE
                     HAMKKSLRQQVYAEAQPSEAFRDRILASFHAEAEREAVGKLESSQRGAMLSWSSIVPL
                     AAAAAIALFWSSHTDNPVKSVSVGNSDGNHASILNVEQLLDQIVDRHIDRSKPEVTEP
                     ALLDGMEPEVGVPVHFPSLAQYGARWQGGRIVPLRNQNATLNTASLKFLVDGHRVTVY
                     VYNSERLALGSPLKRRVVGNEPVYTGWKRGYSIATADRHGVGYAVATDLGEDEGAEIV
                     ASLH"
     gene            complement(3276..>3672)
                     /locus_tag="VLJ38_10010"
     CDS             complement(3276..>3672)
                     /locus_tag="VLJ38_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39896.1"
                     /translation="GPDADPLADGWIGASTMEAMRDPESRAMRALLEKEIVAALDELP
                     EEFRLAVVLSDVEELSYKEISEIMGCPIGTVMSRLHRGRRLLKRRLYDHARTLGIVGP
                     EEEVGKPAQDRAGEAVVDLSSYRRKASNA"
BASE COUNT          599 a         1216 c         1295 g          562 t
ORIGIN      
        1 gggcggctac tcgattccgc cgagcgtcac gtacgccctg ttgcggctgc tcgttcgcgg
       61 cgaaaccccg gaaaatgccg tgaaaagccc gcggtttcgc ttcgacagca acgactacgc
      121 gctcctgctc gacgggcgct ttccgggcgc ggtgagtgcc gacctcacgc gccgcggtga
      181 aaccgtgcgc acgagcgacg cgacgagtgc ggtgcaggtg ctcgcgttca cgccgggcgg
      241 ggtggtgggg gcggccgacc cgcgaaaagg cggcgcggcg ctcatggagt gataacctcc
      301 gcggtcgatg ctgaagtcgc ctgagcccaa gctcggtcaa aacgccgagg agctcgacgc
      361 aggctgggaa accgcagtcg ctccccccac ggcgccgcgt ccgggcggcg tgagtgtcac
      421 gcccgccgcc gtcgctaccg acgagctcga cgacgcgtgg ggcgagctgc ccgtcgagcc
      481 gctcttggcg ctgcgtcgtg ccgagccggt cacggcgaaa ccacgcggca cgcccgcgtc
      541 gcagccgcca ttagcgaaat ctcgcgcgct gccggcagcg gagcggcccg tcgcgaagac
      601 gccgctcgcc gtggcgccgc cggtcgtcga gaaggccgcc acggcggagg cgtcagccgc
      661 ttcgaagccc gccgcgaccg cgcaaccgag cgtcgcgaga gccgtcgttc ccgtcgtccc
      721 cacgaagccg accgcgccga cgccggcgcc gcgcgcgctg agcaagaagg agcgccgcgc
      781 gctcgagcgc aagcaacggg cgcacgcgac gcagaaggtg tcggagcgca agcagagcgc
      841 gcgcgccaaa cgacgagaag aagcgcagcg gttggccgaa cagcgacaag cggcgcgcca
      901 cgcagcgcac gcagcgctga agcaacgtgc gcgcgaggag aagcgcgcca cgaacaagcc
      961 gcgatcgaag cgtgcggcgg cggatgaagg cgtcacgctg gcggttccga aaagtggaac
     1021 gaaacgcgaa gcagccgcag cgtcgcgcac caaaggtcgc cccaagaaat actcgggcgg
     1081 aggctacatc gtcgcgctca tcgcgctcat cacgctcgcg accggtcttt acgcctggtc
     1141 gaagcgctga cgcgaaaggc gcgcacgttt cggcactagc tcgggccgca gtgccagctc
     1201 gtcacggaat ctagagaggg cgtcatgagc gaggattttc tgcacgcagc gccggagatc
     1261 gaacgcttcg ccgacgtgat cgagccgcac ttttatcgtg acgcgcccga tcactggcac
     1321 gtcgtgctca cggacgtgcg cggctcgacg aaggcgatcg aagccgggcg ttatcgagac
     1381 gtgaatgcgc tcggggtcgc ttcgatcgtc gcgattcgca acgcgacgcc ggacctcgag
     1441 ttgccgtacg tattcggcgg cgacggcgcg acgctcttga ttccggagac gcgccgcgcc
     1501 gtctgcgaag cggcgctgcg cggcgtgcgt aaactcgcgc gttcggcgtt cgagctcgag
     1561 ctgcgcgtgg ggctcgtgcc ggtcggcgag ctccggaacg cagggcacgg cgtgcaggtc
     1621 gcgcgttttc gtgcgagtcg gttcgtgcgg ctcgcgatgc tgcgcggcag tggcatcgcg
     1681 caggcggaac gctgggtgaa ggatccgatc gcgagcgcgc gttacgccgt gagcgaggac
     1741 ggacccgacg cggcaagctt cgaaggtttc gagtgtcgct ggcagccggt gccgagccgg
     1801 cgcgggcaga tcgtgagctt catcgtgcag gcactcgacg ccacggaagc cgagcgcgca
     1861 cgcagctacc ggcagatcat cgccacgctc gaagcggcgc tcggtgaagg cgcgggccat
     1921 ccgatttcac tcgccggcct acggctcggc acgtttttcg gcaaatactc gacggaagcg
     1981 cggctgcgtt cgggcgcgac gcaaggtgac ggctatcgcg cggccgcggg tgaagcgcgt
     2041 aagaagtcgc tgatcggccg cgcgctcatg gcgctcggcg cgtcggcggg tggcttcgac
     2101 ggcaaggcgt atccgcgcga gctcatcgaa aattcggatt ttcgcaagtt cgatgaagcg
     2161 ctgcgcatgg tgctcgacgt ttcggccgaa cagctcgccg cgatcgaagc ggagctcgag
     2221 cgggcccgcg tcgaggggca cctcgtgtac ggcatccatc gcgcgccctc ggcgctcatc
     2281 acctgctact tacggtcgta ccagggcgac cacgtgcact tcgtcgacgg ctccgacggc
     2341 ggctacgcgc tcgcggcgcg acagctcaaa gcgcagctgc tcgagcgcgc gcggagtgcg
     2401 tgagaccggg cgagcggcgc ggtacggcgc gttcgctcag tgcagcgacg cgacgatctc
     2461 ggcgccttcg tcttcaccga ggtcggtggc gacggcgtaa ccgacgccgt ggcgatcggc
     2521 cgtggcgatc gaataaccgc gtttccagcc cgtgtagacg ggctcgttgc cgacgacgcg
     2581 gcgcttgagc ggcgagccga gcgccaaacg ctccgagtta tagacgtaga cggtgacgcg
     2641 gtgaccgtcg accaggaact tgagcgaggc cgtgttcagc gtcgcgttct gattgcgaag
     2701 cggcacgatc ctgccgccct gccagcgggc gccgtactgc gcgaggctcg gaaagtgcac
     2761 gggaacgccg acctccggct ccatgccgtc gagcagcgcg ggctcggtga cttccggctt
     2821 cgagcgatcg atgtggcgat cgacgatttg atcgagcagc tgttcgacgt tgaggatgct
     2881 tgcgtgattg ccgtcgctgt ttccgacgct caccgacttg acggggttgt ccgtgtggct
     2941 cgaccaaaag agcgcgatgg cggccgcggc ggcgagcggc acgatgctgc tccacgagag
     3001 catcgctccg cgctgtgacg attcgagctt gccgaccgct tcacgttcgg cctcggcgtg
     3061 aaacgacgcg aggatgcggt cgcggaacgc ttccgacggc tgcgcttccg cgtacacctg
     3121 ctggcgcagg ctctttttca tggcgtgctc gagctgcaac cgcgacgaac agccgtggca
     3181 gtcggcgagg tgcgcttcca tttcgagcac gtgctcgggc tcgagctcgc cgtcggcgta
     3241 ggcatcgagc agcgtcacga cacggcgaca ggcactcatg cgttgcttgc ctttctacgg
     3301 tagctcgaga ggtcgaccac cgcttcgcct gcgcggtcct gcgccggctt gccgacttcc
     3361 tcttccggtc cgacgatgcc gagcgtgcgc gcatgatcgt agagccggcg cttgagcagc
     3421 cggcgtccac ggtgcaggcg cgacatcacc gtgccgatgg gacagcccat gatctccgag
     3481 atttctttat agctgagctc ctcgacgtcc gacaacacga cggcgagccg gaactcctcg
     3541 ggcaactcgt cgagcgcggc gacgatttcc ttttcgagca gcgcgcgcat cgcccgcgac
     3601 tccgggtccc gcatggcttc catcgtcgaa gcgccgatcc aaccgtcggc gagcggatcg
     3661 gcgtccggtc cg
//
LOCUS       DATIML010000583         3538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_118903, whole genome shotgun sequence.
ACCESSION   DATIML010000583 DATIML010000000
VERSION     DATIML010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118903"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..672
                     /locus_tag="VLJ38_10015"
     CDS             247..672
                     /locus_tag="VLJ38_10015"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSU39897.1"
                     /translation="MAKIDVTKVWALNYRLVSSVLGEVAPALGELGVEVKELFLLAEL
                     DTTPYPAALAAALLIPKPTVSLYVKRLEAAGLVKREIDCSDLRRYKLSLTPDGRKTMT
                     RGLALLASTFGARLGRLTSMQQAEFKGLLEKLAKRRDAD"
     gene            915..2270
                     /locus_tag="VLJ38_10020"
     CDS             915..2270
                     /locus_tag="VLJ38_10020"
                     /inference="COORDINATES: protein motif:HMM:NF023218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HSU39898.1"
                     /translation="MTNVHPPVNTGGTPSEFAGNGGALPGHTAAGASGTLGTGGTSSP
                     GGASANGGASGMVGASALGGATAAAGRGAGGSTSTGGRRAAAGGTGVSGATSTSGSAG
                     MTAAGRSAAGGSSGSAGGTPVCGTAAEDASTTLTCPDGQIIQAITFASFGTPTGSCGS
                     FMASDCNAASSVSSIEALCVGRSTCTITASNGSFGDPCHGTTKHLDVEASCVVGDPLP
                     TTNSPYKGVANSPAAQLSALGSTWCYNWGTTPKSTDCNDPSFVPMIWGSDNVASALQG
                     IAKAGYKTVLGFNEPNKSDQSNIAVADAIALWPQLTSNADIRVGSPAVSDDGRAWLED
                     FMKQVKSKGLRVDFIDMHWYGWNAGSCTASQFEGAVNWASQWGLPVWVTEWGCMGSSN
                     PDEQTVLDFYKSAITMLAKHPLVERYAWYPWNTYNKLYDDSGKITALGQAFAAAPQYR
                     P"
     gene            complement(2302..>3538)
                     /locus_tag="VLJ38_10025"
     CDS             complement(2302..>3538)
                     /locus_tag="VLJ38_10025"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSU39899.1"
                     /translation="VVAAPGTLEQPTTLASALVRVTAGHTIFARGGRYVSATQITIAR
                     DNSGTKAAPKRLAAYATEQPILDFSSQPYGTGSNPRGLQINGSFWYLRGLEVMGAADN
                     GIYVAGSGNVIESAVTHGNRDTGLQLGRVTSDDTDLASWPSNNLILNCESYDNYDAPP
                     GSGENADGFAAKLTVGPGNVFRGCISHHNIDDGWDLYTKHDTGVIGPVTIDQCISYAN
                     GTLSDGTTNANGDRNGFKLGGEDIAVAHVVTRSVAFGNGKNGFTWNSNPGAIRLSNNL
                     AFDNVEGNFEFGDDGTATAAVFTNNVSFWTSTHDTQSDQAVGSDTPGTNAWWDKSRAT
                     STVASTSIVVTAADFASSLVAPSIARRADQTPDFAPFALAAQSSLVDAGVVPAGDLPF
                     DAASYYENAPDLGAVELGR"
BASE COUNT          600 a         1137 c         1222 g          579 t
ORIGIN      
        1 ttaccgcccg ccgcgatgta acggtccatg atctgctgcg attcttcgac cgaagagccc
       61 cagccgagat cttccccgaa cgtcatggcg ccgaggcaca gggggctgac gcgcaaaccc
      121 gaacgaccga gggtgacgta atgatcgagt gccatgcgat tgctccgtgg tagcgttggt
      181 tcaacgttca gttagttccg aatcgcgtaa tgtttaggat tgaactaatc gttcgacaag
      241 tgccccatgg cgaaaatcga cgtgacgaag gtgtgggcgc tcaattacag gctcgtttcc
      301 tccgtgctcg gggaggtggc gcccgcgctc ggcgagctcg gggttgaggt gaaggagctt
      361 ttcctcttgg ccgagctcga tacgacaccg tacccggccg cgctcgccgc ggcacttttg
      421 atcccgaagc cgaccgtctc cttgtacgtg aagcgcctcg aggccgcggg tctcgtgaaa
      481 cgcgagatcg actgctcgga tctccgccgc tacaagcttt cgctgacgcc ggacggtcgt
      541 aagacgatga cgcgcgggct cgcgttgctc gcgagcacgt tcggcgcgcg cctggggcgg
      601 ctcacgtcga tgcagcaggc ggagttcaaa ggcttgctcg aaaagctcgc aaagcgccgt
      661 gacgcggatt gaagaggacg agcgccggcg ccggaaaaat aggccgcgac tgtcccatcc
      721 ctggccgctg atccgcacgg tgcccacgac ttagcatccg aagccgagca acgctcgcga
      781 gcgcgtgcga cactacgggc gtgcgctacg gcttgcttgg taccaccgcc ctcacgtgcg
      841 gcctggggtc gctcctcgcc gctcctgcct gcgccacgga ccccggcggc gccgcttcgc
      901 cgagcgacgg cggcatgacg aacgttcatc caccggtcaa taccgggggc acgccgagcg
      961 agttcgccgg taacggtgga gctctacctg ggcacacggc agcgggagca agcggcacgc
     1021 tcggcaccgg cggcacgagc tccccgggcg gcgcgtcggc caacggcggg gcgagcggga
     1081 tggtcggcgc gagcgcgctg ggcggagcca cggcggccgc ggggcgcggc gcgggcggca
     1141 gcacgagcac tggcggacgc cgtgcggcgg ccggcggaac gggcgtcagc ggcgccacca
     1201 gcacgagcgg cagcgccggc atgactgcag caggccgcag cgccgcgggc ggcagcagcg
     1261 gttcggcagg cggcacgccc gtgtgcggca cggcggccga ggacgcaagc accacactca
     1321 cctgccccga cggtcagatc atccaggcca tcacgttcgc gagcttcggg acgccgacgg
     1381 gaagctgcgg aagcttcatg gcgagcgatt gcaatgcggc gtcgagcgtg agcagcatcg
     1441 aagcgctctg cgtcgggcgg agcacgtgca cgatcacggc gtccaacggc agcttcggag
     1501 acccctgcca cggcaccacg aagcacttgg acgtcgaagc gtcgtgcgtc gtgggtgacc
     1561 cgctaccgac gacgaacagt ccgtacaaag gtgtcgcgaa ctcgccggcc gcgcagctct
     1621 ccgcgctcgg ttcgacctgg tgttacaact ggggcaccac gccgaagagc acggactgca
     1681 atgatccgtc cttcgtgccg atgatctggg gttcggacaa cgtggcgagc gcgctgcaag
     1741 gcatcgccaa ggccggctac aagacggtgc tcggcttcaa cgagccgaac aagtcggatc
     1801 agtcgaacat cgcggtcgcg gacgcgatcg cgctctggcc gcaattgacg agcaacgcgg
     1861 acattcgcgt gggaagcccc gccgtgtcgg acgacgggcg cgcctggctc gaggacttca
     1921 tgaagcaggt gaagagcaag ggcctgcgcg tcgatttcat cgacatgcat tggtacggct
     1981 ggaacgcggg ctcgtgcacg gcgagtcagt tcgagggcgc cgtgaactgg gcgtcgcagt
     2041 ggggtctgcc cgtctgggtc acggaatggg gttgcatggg ctcgagcaat cccgacgagc
     2101 agaccgtgct cgacttttac aagagcgcga tcacgatgct cgccaagcac ccgctcgtcg
     2161 aacgctacgc ctggtacccc tggaacacgt acaataagct ctacgacgac agcggcaaga
     2221 tcacggcgct cggtcaggca ttcgcggcgg cgccgcaata tcggccatag cgctcgcctc
     2281 agcaccggcg atgccggaac gtcagcgccc gagctcgacc gcgccgaggt cgggagcatt
     2341 ctcgtagtag ctcgccgcgt cgaacggtag atcacccgcc ggtaccacgc ccgcgtcgac
     2401 gagtgagctc tgcgcggcga gcgcgaacgg cgcgaaatcc ggggtttgat cggcgcggcg
     2461 cgcgatcgac ggcgcgacga gtgagctcgc gaaatccgcg gccgtgacga cgatgctcgt
     2521 cgacgccacc gtggacgtgg ccctcgactt gtcccaccac gcgttggtgc ccggcgtgtc
     2581 gctgccgacc gcctggtcgc tctgcgtgtc gtgcgtcgag gtccagaacg agacgttgtt
     2641 ggtgaagacg gccgcggtcg ccgtgccgtc gtcgccgaac tcgaagttgc cttcgacgtt
     2701 gtcgaacgcg agattgttgc tgaggcggat ggcgcccgga ttgctgttcc aggtgaagcc
     2761 gttcttgccg ttgccgaagg ccaccgagcg cgtgacgacg tgagcgacgg cgatgtcttc
     2821 gccgccgagc ttgaagccgt tgcggtcgcc gttggcgttg gtcgtgccgt cgctgagcgt
     2881 gccgttggcg taggagatgc actgatcgat cgtgacgggg ccaatcacgc ccgtgtcgtg
     2941 cttggtgtaa aggtcccagc cgtcgtcgat gttgtggtgc gagatgcagc cgcgaaacac
     3001 gttgccggga ccgaccgtga gcttggccgc aaagccgtcg gcattctcgc cgctgccggg
     3061 cggcgcgtcg tagttgtcgt acgactcgca attcaaaatc aggttgttcg acggccaact
     3121 cgcgaggtcg gtgtcgtccg aggtcacgcg gccgagctgc aggcccgtat cgcgattgcc
     3181 gtgcgtgacc gcgctttcga tgacgttgcc gctgccggcc acgtagatcc cgttgtccgc
     3241 ggcccccatc acctcgagcc cacgcaaata ccaaaagctc ccgttgattt gcaggccgcg
     3301 cggattcgag cccgtgccgt acggctgcga cgaaaagtcc aatatcggct gttcggtcgc
     3361 gtacgctgcg aggcgtttgg gcgcggcttt ggtgccgctg ttgtcgcgtg cgatcgtgat
     3421 ttgcgtcgcc gaaacgtagc gaccgccgcg cgcgaaaatc gtgtgccccg ccgtcacgcg
     3481 aacgagcgcg ctcgccagcg tggtcggctg ctcgagcgta cccggcgcag caacgacg
//
LOCUS       DATIML010000584         4096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1563474, whole genome shotgun sequence.
ACCESSION   DATIML010000584 DATIML010000000
VERSION     DATIML010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563474"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..1234
                     /gene="tsaD"
                     /locus_tag="VLJ38_10030"
     CDS             161..1234
                     /gene="tsaD"
                     /locus_tag="VLJ38_10030"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HSU39900.1"
                     /translation="MTLIVLGIETSCDETGAALVRVSGEVLSDVVQSQVKLHAPYGGV
                     VPELASRDHLRNVEPVLVEAAARAGMKLADVDGVAVTCRPGLSGALLVGVQAARGLAW
                     ALEKPLVGVDHLVGHLLSPFLRFANVESPAAPEYPFVALLASGGHTALYRVDDSSVAA
                     IRELGATRDDAAGEAFDKVAKLLGLGYPGGPVIDRLAKEGNPEAVDLIWPMRQKNSFE
                     FSFSGLKSDVLRWVERNGRPGNDQTLRDLCAGFQRRVVDTLVGQAVLAAEREGARTLV
                     LAGGVAANRELRERALAAATASGIRLVVPPFRACTDNAAMIAYAGAQRLARGERDTEL
                     EISPNTALPRVTRKGRGARAARV"
     gene            complement(1246..3333)
                     /locus_tag="VLJ38_10035"
     CDS             complement(1246..3333)
                     /locus_tag="VLJ38_10035"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU39901.1"
                     /translation="MTQAQERRAQGTSRVPLETLVEICGNEPGIPAFEAQALDVSAQG
                     MHLRTAYLPDEGAPLVCRFEDRGREIVVEGVVAWRKESAKGGDFGVAFTALDSRSVDA
                     LKALIKTGEPGEKAASGEGPSGARVRLHIEGLGSPMKARIRTGSGQKIQVGSSLEFLK
                     VGRKLEIEDLDVGGRRTAQIDGVQVVVDPRTSVPQLVVALRYAGATEDTPEPSVTDLG
                     ADPVRPQSLRIAPEAVTLEPSRHSDPGDPAPSGDAPEARSDDQSNDDEDDEFDSAVPA
                     TTRAARKLGNAAENAGTVARDASVAAARWGSATLGQLFAGASAKIAALRGQKAAPPKR
                     RTTAKPADTSNALDAKRLRPQSSTKSAADAPDAEAAPARKSNKRAAIVIAVAAVSASA
                     GVIALRPAKVPSKTASAATAMDGAGLATGAVGGPAPFAAPGVTALATGVTALPGAAPI
                     TAGGMLAVPGATDPAAPPPGSPVTANVPLFGPTPLATTEPAPLGPPPTAATRGLEQAE
                     LTAAKAVTPPTASDEEFADPIEHVDGSRKSADGKSADGKNARPEDVPAWGKGKMHTPT
                     VHRLRLDGPGSELHGVSDATGFTVLVPGRKIMEQGDSIIKRDPRIGRARTTNTPGGAQ
                     VRITFRETLPAYRVRLRRDYIELLISESEESAPSKPSTKEAKPTRDSKDPKDGAKLGP
                     KNTLAAKSIPAKH"
     gene            3414..>4096
                     /locus_tag="VLJ38_10040"
     CDS             3414..>4096
                     /locus_tag="VLJ38_10040"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU39902.1"
                     /translation="MALTIVIRSGDTLAPAQITFDAPRVVIGRGEGCEVRLPDPSVSH
                     RHASIRQRGTEYVVIDEGSSNGTFVGPVRLSAQAPRVLRHRDLIRVGRIWLEVRVEQA
                     LPTVNPQATTREIALGLVGAALTAQGEEVSARVRVEQGPDTGRELVMHDVERTYVIGR
                     MPTADLPLADNDTSRRHVELKRVGQHIAARDLGSKNGSALGGKKLEPNRDTPWLPGLA
                     LELGKTTLAL"
BASE COUNT          562 a         1460 c         1417 g          657 t
ORIGIN      
        1 aggccgacaa tcgcgagccc actccaccta gaagccatgg ccaactatgc ccgcgtctgc
       61 tcgaaatgag cagctcgccg tcgagaaaaa gcggtcacct ggacgagctc gggccgccgc
      121 cttggaataa tgtagcgccc ttgttccgaa ccccacgagc gtgaccttga tcgtactcgg
      181 catcgaaacc tcttgtgacg aaaccggcgc ggccctcgtg cgcgtctctg gcgaagtcct
      241 gagcgacgtc gttcagagcc aggtgaaact gcacgccccc tacggcggcg tcgtgcccga
      301 gctagcgtcg cgcgatcact tgcgcaacgt cgagcccgtg ctcgtcgaag cggcggcgcg
      361 cgctggcatg aagctcgctg acgtggacgg cgtcgccgtc acctgccgtc cggggctctc
      421 gggcgcgctg ctcgtcggcg tgcaagcggc gcggggtctc gcctgggcgc tcgaaaaacc
      481 gctcgtcggc gtcgaccacc tggtaggcca cctactctcg ccgttcttgc gtttcgcgaa
      541 cgtcgaaagc ccggcggcac ccgagtatcc cttcgtcgcg ctgctcgcgt cgggcggcca
      601 caccgcgctc tatcgtgtcg atgactcgag cgtcgcggcg attcgggagc tcggcgcgac
      661 gcgcgacgat gccgcgggcg aagcgttcga caaggtcgcg aagctcctcg gcctgggcta
      721 cccgggcggc cccgtcatcg accgcctcgc caaagaagga aatcccgagg cggtcgatct
      781 gatttggccg atgcgccaaa agaactcctt cgagttcagc ttctcggggt tgaagagcga
      841 cgtcttgcgc tgggtcgagc gcaacggccg ccccggcaac gaccaaaccc tgcgcgatct
      901 ctgcgccggg tttcagcggc gcgtcgtcga cacgctcgtc ggtcaagccg tgctcgcggc
      961 cgaacgtgaa ggagctcgta ccctcgtgct cgccggcggt gtcgccgcca atcgcgagct
     1021 ccgagaacga gcgctcgctg ccgcaacggc cagcggcatc cgcctcgtgg tcccgccgtt
     1081 tcgagcgtgc acggacaacg cggcgatgat cgcctacgcc ggcgctcagc gcctcgcgcg
     1141 gggcgagcgc gacaccgagc tcgagatcag cccgaacacg gcgctcccgc gcgtcacgcg
     1201 caagggccgc ggcgcgcggg cggcgcgggt gtagcgcgca gtagctcagt gcttcgccgg
     1261 aatcgatttc gccgcgagcg tgttcttcgg gccgagcttg gcgccgtctt tcgggtcctt
     1321 cgagtccctg gtgggtttgg cctctttggt gctcggcttg cttggcgcgg actcttcgga
     1381 ctcgctgatc aagagctcga tgtagtcgcg gcgcaggcgc acgcggtacg ccggcagcgt
     1441 ctcgcggaag gtgatgcgca cttgcgcgcc gcccggcgtg ttcgtcgtgc gcgcgcggcc
     1501 gatgcgcgga tcgcgcttga tgatggagtc gccctgctcc atgattttgc gaccggggac
     1561 gagcacggtg aagccggtcg catcggaaac gccgtggagc tccgagcccg ggccgtcgag
     1621 ccgcaagcgg tgcacggtcg gtgtgtgcat cttgcctttg ccccacgccg gcacgtcctc
     1681 ggggcgagcg ttcttgccgt cggcgctctt gccgtccgcg ctcttcctgc tgccgtcaac
     1741 gtgctcgatc gggtcagcga actcttcgtc actggccgtc ggcggcgtga cggccttcgc
     1801 agcggtgagc tccgcctgtt cgagtcctcg agtggcggcg gttggcggcg gaccgagcgg
     1861 cgccggctcg gtcgtagcga gcggcgtcgg gccgaagagc ggcacgtttg cggtcacggg
     1921 cgagccgggc ggcggggccg ccgggtccgt ggcacccggg accgcgagca tcccccccgc
     1981 cgtgatcggc gccgcacccg gcagcgccgt aacgcccgtc gccagcgcgg tgacgcccgg
     2041 tgcggcgaac ggtgctggcc cacccacggc gcccgtcgcg aggccggcgc cgtccatcgc
     2101 cgtggcggca ctcgccgtct tcgaggggac cttggcggga cggagcgcga tgacgcccgc
     2161 cgacgccgaa accgccgcga ccgcgatcac gatggccgca cgcttgttcg acttgcgcgc
     2221 gggagccgct tcggcgtcgg gcgcatcggc cgccgacttg gtcgacgatt gggggcgcag
     2281 gcgtttggcg tcgagcgcgt tcgacgtgtc ggccggtttg gccgtggtgc ggcgcttggg
     2341 cggcgcggcc ttttgaccgc gcagcgccgc gattttcgcg gacgcacccg cgaacagctg
     2401 accgagggtc gcggaacccc agcgtgcggc cgcaacgctc gcgtcgcgcg cgaccgtgcc
     2461 ggcattttcg gcggcgttgc ccaatttgcg agccgcgcgc gtcgtcgcgg gtacggcgga
     2521 gtcgaactcg tcgtcctcgt cgtcgttgct ttggtcgtcg ctcctcgcct ccggcgcgtc
     2581 acccgacggc gccggatcac ccgggtcgct atggcgcgac ggctccagcg tgacggcttc
     2641 gggtgcgatg cgcagcgact gcgggcgcac gggatccgcg ccgagatcgg tgacgctcgg
     2701 ctccggtgtg tcctcggtag cgcctgcata acgcaacgcg acgacgagct gcggcacgga
     2761 cgtacgcgga tcgaccacca cctgaacgcc gtcgatctgc gccgtgcgcc gaccgcccac
     2821 gtcgagatct tcgatctcga gcttgcgacc caccttcaaa aattcgagac tcgagcccac
     2881 ctggatcttt tgcccgctgc ccgtgcggat gcgcgccttc atgggcgaac cgagaccctc
     2941 gatgtgcagg cgcacgcgcg cgccgctcgg tccctcgccg gaggcggcct tctcgcccgg
     3001 ttcgcccgtc ttgatcagcg ccttcaaagc atcgacgctg cggctgtcga gcgccgtgaa
     3061 cgcgacgccg aagtcgccgc ctttggcgct ctccttgcgc caagcgacca cgccctcgac
     3121 cacgatctcg cggccacggt cctcgaagcg gcagacgagc ggagcgccct cgtcgggcag
     3181 gtaggccgtg cgcaggtgca tgccctgcgc gctcacgtcg agtgcctgcg cctcgaaggc
     3241 gggaatgccg ggctcattgc cgcaaatctc gaccagggtc tcgaggggca cgcggctcgt
     3301 gccctgggcg cgtcgttctt gggcttgggt catggcatct cgccgatagg tcgcccgcgg
     3361 ctcctgggcc aactttcccg gcgcggtgtg ctcgccgtaa gctcctgcga cccatggctt
     3421 tgactatcgt gatccgctcg ggcgacacgc tggcgcccgc ccagatcacg ttcgacgccc
     3481 cgcgggtcgt gatcggccgg ggcgaaggct gcgaagtgcg actgcccgac ccgagcgtga
     3541 gccatcgcca cgcctccatt cggcagcgcg gcaccgagta cgtcgtcatc gacgaaggca
     3601 gctcgaacgg tacgttcgtt ggacccgtac ggctctcggc gcaagccccg cgcgtgctgc
     3661 ggcaccggga cttgatccgc gtcggtcgca tctggctcga ggtgcgcgtc gagcaagcgc
     3721 tgcccaccgt gaacccgcag gcgacgacgc gcgagatcgc cctcggtctc gtgggggcgg
     3781 cgctgaccgc gcaaggcgaa gaggtgagcg cgcgcgtgcg cgtcgagcag ggccccgaca
     3841 cgggtcgcga gctcgtcatg cacgacgtcg aacgcaccta cgtcatcggg cgcatgccga
     3901 ccgccgacct gccgctcgcc gacaacgaca cctcgcgccg ccacgtcgag ctcaaacgcg
     3961 tcggccagca catcgccgcg cgcgacctcg gctccaagaa cggctccgcg ctcggcggca
     4021 aaaagctcga gccgaaccgc gacacgccgt ggctcccggg ccttgcgctc gagctcggca
     4081 agacgacgct cgcgct
//
LOCUS       DATIML010000585         2822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5030656, whole genome shotgun sequence.
ACCESSION   DATIML010000585 DATIML010000000
VERSION     DATIML010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5030656"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..1835
                     /locus_tag="VLJ38_10045"
     CDS             165..1835
                     /locus_tag="VLJ38_10045"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HSU39903.1"
                     /translation="MVHPVTGSPADTVRIFDTTLRDGEQSPGATLTSEEKLEVARALS
                     RLGVDVIEAGFPCASPDDFEAVKSIASTVGVTPVEGRPSSEPPVICGLARAAENDIKR
                     AFEAVKVAKHPRIHIFLATSPIHREHKLRMTKEQVVERMVRMVTYAKTLCDDIEFSPE
                     DAGRTEPEFLYQVLEAAIRAGATTLNIPDTVGYTMPDEFGALIAGIMQNVPGIEKAIV
                     SVHCHNDLGLATANTLAGIKNGARQAEVTINGIGERAGNTALEEVVMALRTREPVFKL
                     NTNIDTTQLTRTSKLVSVRTGMVVQPNKAVVGANAFAHESGIHQDGMLKNEATYEIMR
                     PETVGAGQTLLVLGKHSGRHAFAVRLRELGHALEGEGLDAAFARFKLLADKKKRITDA
                     DLEALAVSEFGRGREYFQLDAVQVTCGSNGMPTATVRLRCPDGELRTRAAVGTGPVHA
                     VFRAVDEIVQAPAELLEYSINNVTEGIDALGHASVRVRGAGDGGRVNPQHGSGQAPIL
                     HGHAADTDVIVASTKAYLAALNRVLATVSAQAQTSSPTAAHEPQKAVS"
     gene            1848..>2822
                     /locus_tag="VLJ38_10050"
     CDS             1848..>2822
                     /locus_tag="VLJ38_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HSU39904.1"
                     /translation="MTDAPLRPDPDLVEIYDTTLRDGSQREGISYTASDKLRIAQKLD
                     EFGVAFIEGGWPGSNPKDAEFFARARDVEWKHAVVTAFGSTRRAKLGPENDASMRALL
                     DAGTKACTVVGKTWTLHVTDVLRTTLEDNLKMIEESVRFLVSEQRRVIYDAEHFFDGY
                     AADSAYALETLRAALRGGAETLVLCETNGGRLPWFVEETTRAVSAALGADTRLGIHAH
                     DDAGCGVANSLAAVRGGVTHVQGTINGYGERCGNANLSVIVPNLELKLGRRCLVPGRL
                     REITELSRFVAEVANLAPDDHAAYVGRSAFAHKGGVHVAAMRRTPASYQ"
BASE COUNT          508 a          970 c          940 g          404 t
ORIGIN      
        1 agattttgca ggaaaggcct aggatcgccg tggcctagga tccgttcgaa cgagacattt
       61 ttgcgcaccg ttgacccctt ttcccgacct cgcgctggcc gttacttcta gaacacaggc
      121 tgtcgccgaa ccgatacggc atccgattca acgaaagaaa agccatggtc cacccagtta
      181 caggctcccc cgctgacacc gttcgcatct tcgacacgac gcttcgtgac ggcgagcaat
      241 cgccgggcgc gacgctcacg tccgaagaga agctcgaggt cgcgcgggcg ctttcacggt
      301 tgggcgtgga cgtgatcgaa gcggggttcc cctgcgcctc accggacgac ttcgaagcgg
      361 tgaagagtat cgcttcgacg gtcggcgtga cgccggtcga gggtcgaccg agcagcgaac
      421 cgccggtgat ctgcggcctc gctcgcgcgg ccgagaacga catcaagcgc gccttcgagg
      481 cggtgaaggt cgccaagcac ccgcgcattc acatcttcct cgcgacctcg ccgatccatc
      541 gcgagcacaa gctccggatg acgaaggagc aagtggtcga gcgcatggtg cgcatggtga
      601 cgtacgccaa gacgctgtgc gacgacatcg agttcagccc cgaagacgcc ggccgcaccg
      661 aaccggagtt cttgtatcag gtgctcgaag ccgcgatccg cgcgggcgcg acgacgctga
      721 acatccccga caccgtcggc tacacgatgc cggacgagtt cggcgcgctg atcgccggca
      781 tcatgcagaa cgtgccgggc atcgaaaaag cgatcgtctc ggtgcactgt cacaacgacc
      841 tcggactcgc gacggccaac acgctcgccg gcatcaagaa cggcgcgcgc caggccgagg
      901 tgacgatcaa cggcatcggc gagcgcgcgg gcaacacggc gctcgaggag gtcgtgatgg
      961 ccctgcgcac gcgcgagccc gtgttcaagc tgaacacgaa catcgacacc acgcagctca
     1021 cgcgcacgag caagctcgtc tcggtgcgta cgggcatggt ggtgcagccg aacaaggccg
     1081 tcgtcggcgc gaacgccttc gcgcacgagt cgggcatcca ccaagacggc atgctcaaaa
     1141 acgaagcgac gtacgaaatc atgcgacccg agacggtcgg cgcgggccag acgttgctcg
     1201 tgctcggcaa gcattcggga cggcacgcct tcgccgtgcg gctgcgcgag ctcggtcacg
     1261 cgctcgaggg cgaagggctc gacgcggcgt tcgcgcgttt caagctgctc gccgacaaga
     1321 agaagcgcat caccgacgcc gacctcgagg cgctcgccgt cagcgagttc gggcgcgggc
     1381 gcgagtactt ccagctcgac gccgtgcagg tgacgtgcgg ctcgaacggc atgccgacgg
     1441 cgacggtgcg cttgcgctgt ccggacggcg agctccggac gcgggccgcc gtcggtaccg
     1501 gccccgtgca cgccgtgttc cgcgcggtcg acgagatcgt gcaagccccg gccgagctcc
     1561 tcgaatactc gatcaacaac gtgaccgagg gcatcgacgc gctcggccac gcgagcgtgc
     1621 gggtgcgcgg cgcgggcgac ggcgggcgcg tcaatccgca gcacggctcg ggccaagctc
     1681 cgattttgca cgggcatgcc gccgacaccg acgtgatcgt cgcgagcacc aaggcctatc
     1741 ttgctgctct gaaccgcgtg ctcgccacgg tgagcgcgca ggcgcaaact tcgagcccca
     1801 cggcggccca cgaaccgcag aaggccgtca gctgagcccg cttgcccatg accgacgccc
     1861 cacttagacc cgaccccgac ctcgtcgaga tctacgacac gacgctgcgc gacggctcgc
     1921 agcgcgaagg gatttcgtac accgcgtccg acaagctgcg catcgcgcag aagctcgacg
     1981 agttcggggt agccttcatc gagggcggct ggccgggctc gaaccccaaa gacgccgaat
     2041 ttttcgcgcg ggcgcgcgac gtcgagtgga agcacgccgt cgtcacggcg ttcggctcga
     2101 cacgccgcgc caagctcggt cccgagaacg acgccagcat gcgcgcgctg ctcgacgcgg
     2161 gcaccaaggc gtgcacggtc gtcggcaaga cgtggacctt gcacgtgacc gacgtgcttc
     2221 ggacgacgct cgaagacaat ttgaagatga tcgaagagag cgtgcgcttt ctcgtgagcg
     2281 agcagcggcg cgtgatctac gacgcggagc acttcttcga cggctacgcg gccgatagcg
     2341 cgtacgcgct cgagaccttg cgcgcggccc tacgcggcgg cgccgagacg ctcgtcttgt
     2401 gtgaaacgaa cggcggccgc ttgccctggt tcgtcgagga gacgacgcgc gccgtgagcg
     2461 cggcgctcgg cgcggacacg cggctcggca tccacgcgca cgacgacgcg ggctgcggcg
     2521 tcgccaattc gctcgcggcc gtgcgcggcg gcgtgacgca cgtgcagggc accatcaacg
     2581 gctacggcga gcgttgcggc aacgccaatc tctcggtgat cgtgccgaac ctcgagctca
     2641 agctcgggcg gcgctgcctc gtgcccgggc ggttgcgcga gatcacggag ctttcgcgct
     2701 tcgtcgccga ggtcgcgaac ctcgcccccg acgaccacgc cgcctacgtc ggccgcagcg
     2761 ccttcgccca caagggcggc gtgcacgtcg ccgccatgcg ccgcacgccc gcgtcgtacc
     2821 ag
//
LOCUS       DATIML010000586         2690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_408591, whole genome shotgun sequence.
ACCESSION   DATIML010000586 DATIML010000000
VERSION     DATIML010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408591"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VLJ38_10055"
     CDS             <1..338
                     /locus_tag="VLJ38_10055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39905.1"
                     /translation="EARYSRWPFGAGAVLRVAGRHLATELELGGTLGWLHVEGRSFSP
                     DQSANDVTFGPFAAVRLGPAHGRVRPFVEVWSVVWARSARVYADAAQPSHLLPSFDFA
                     LSVGAAFLP"
     gene            696..1586
                     /locus_tag="VLJ38_10060"
     CDS             696..1586
                     /locus_tag="VLJ38_10060"
                     /inference="COORDINATES: protein motif:HMM:NF019256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1588 domain-containing protein"
                     /protein_id="HSU39906.1"
                     /translation="MLAYGTLAAPEVANERIRLLLSDGMAGPFPAPPDAVTPGWAAQT
                     VDAYLDSMLLSDLVPGGVERFMRSWLGLHDANVAQTLITSSGASFTRADGTFSQLIAP
                     TEGTGLLQDPALNRVHTSISNRGAFLFPTLFCSTLVPPINTGDITGPIMGTPTLTRRQ
                     VLASVTSAPACAGCHNFVDSVGASLEVIDPTTGARRSVDENGLSIDASGTLSTVGISN
                     FGRTYTFTSIDDLAPELASSCEVARCFVTSYVNEGTAALGLPALGNDELEFVITRFSD
                     SHFSLRELARAFVQTPTFLE"
     gene            1635..2201
                     /locus_tag="VLJ38_10065"
     CDS             1635..2201
                     /locus_tag="VLJ38_10065"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39907.1"
                     /translation="MVERTCDDSRAENTRGSLELAAIYRTEGARVARWIQRLDPEGDT
                     EDLLQEVFLVVKRRLPEFRGDAAIGTWLHAVTVRVVVAERRKRKVRRFLLGRETEKFG
                     AEQPPPHTPEELLQGRELGRLLYELLDRLSERDRTLLILHELEGLAGAELAAVTGLSA
                     NGVWVALHRARARLRTAYVGRARERGDR"
     gene            2198..>2690
                     /locus_tag="VLJ38_10070"
     CDS             2198..>2690
                     /locus_tag="VLJ38_10070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39908.1"
                     /translation="MTRAGERSPEHEPPRLAAGDEGDPVFDELGRWFAAAPAPRGIDA
                     TALARVAQRLDGVGRRRRVTSLRALAAAFALVTVATGSAAMWQRLGPSSHAGSPSSGV
                     RAAAPPRQERIAPHHRRAASPADTNAELPATGPVAAPSAFVSPSQSAARAPSPVALRA
                     DRSP"
BASE COUNT          393 a          927 c          944 g          426 t
ORIGIN      
        1 gtgaggcgcg ctactctcgt tggccgttcg gcgcgggcgc cgtgttgcgc gtcgcgggcc
       61 gacacctcgc gaccgagctc gagctcggcg gcacgctcgg ctggctccac gtcgaagggc
      121 gctccttcag ccccgaccag agcgcaaacg acgtgacgtt cggaccgttc gccgcggtcc
      181 ggctcggacc ggcgcacggc cgtgtgcgac ccttcgtcga agtgtggagc gtcgtctggg
      241 cgcgctccgc ccgcgtgtac gccgacgcgg cgcagccaag ccacctgctg ccgagcttcg
      301 attttgcgct ttcggtaggg gctgcgttcc tgccctgagc ccaggtcgta aggtcgtggc
      361 tggtcgcgac accaataggt aagatgcacg aattcagcgg attcctcctg cgcgccagtg
      421 caattgccct gctccttcag ctcggagcgt gcggcggccg ctacgacatc ggtgaccgcg
      481 ccgaaggcgg cgccaatgcg agcggtgggt cggcagggtc ggcgaggacc tcggaggcaa
      541 gcgggggcgc tagcgggaag gtgggagaat cgagggggag cggtgggtcg gtcgcgagcg
      601 gtgggtcggt cgcgagcggt gggtcgtccg ttaccggcac gggtggagac ggcgccggcg
      661 gggcgagctg cgccaactat caggtagatg cttccatgtt ggcgtacggc acgttggcgg
      721 cgcccgaggt ggccaacgag cgcatccgac tcctcctgag cgacggcatg gctggccctt
      781 ttccggcgcc gcccgacgcc gtcacccctg gatgggccgc gcaaaccgtc gacgcgtacc
      841 tcgactccat gctcctgagc gacctcgtgc cagggggcgt cgagcgtttc atgcggagtt
      901 ggctcgggct ccacgacgcc aacgtcgcgc aaacgctgat cacgagcagc ggagcgtcgt
      961 tcacccgcgc cgacggaacg ttctcgcaat taatcgcgcc gacggagggc acggggttac
     1021 tgcaagaccc cgctctcaac cgcgttcaca cgagcatctc gaaccgaggc gccttcctgt
     1081 tcccgaccct gttctgctcg accctcgtgc cgcccatcaa taccggcgac atcacggggc
     1141 cgatcatggg cacgccgacg ctgacgcgcc ggcaagtgct cgccagcgtg acgtctgcgc
     1201 ccgcctgcgc cggctgccac aacttcgtcg actccgttgg cgcgagtctc gaagtcatcg
     1261 acccgacgac gggcgcgcgg cggtcagtcg acgaaaacgg gctcagcatc gacgcgtccg
     1321 gtacgctcag taccgtcggc atctcgaatt tcggccgaac gtacacgttc acgagcatcg
     1381 acgatctcgc gcccgagctc gcctcttcgt gcgaggtcgc gcgctgcttc gtcacgtcct
     1441 acgtgaacga ggggaccgcg gcgctcggcc taccggcgct cggaaacgac gagctcgagt
     1501 tcgtgatcac gcgcttttcc gacagtcatt tttcgctgcg ggagcttgcg cgcgctttcg
     1561 tgcaaacgcc gacgtttttg gagtgaggcg gctcgcgcta cgatgcatcg gccgaggagg
     1621 acacgcttcc gacggtggtt gaaagaacct gcgacgactc tcgagcggag aatacacggg
     1681 gctcactcga gctcgctgcg atctaccgca ccgaaggcgc tcgcgttgcg cgctggattc
     1741 aaaggctcga tcccgagggc gacacggaag atctgctgca ggaagtgttt ttggtggtga
     1801 agcggcgctt accggaattt cgcggtgacg cggcgatcgg cacttggctg cacgccgtca
     1861 cggtgcgcgt cgtcgtggcc gagcgccgca agcgcaaagt tcgccgcttc ctgctcgggc
     1921 gcgagacgga aaagttcggc gccgaacagc cgcctccgca cacgcctgag gagctactcc
     1981 aagggcgcga gctcggtcgc ttgctctacg agctcttgga tcgactttcc gaacgcgatc
     2041 gcacgctgct gatcctgcac gagctcgaag ggctcgcggg cgcggagctc gccgcggtga
     2101 cgggcctgtc ggcgaacgga gtctgggtcg cgctgcatcg cgcgcgcgca cgcttacgca
     2161 cggcgtacgt cggccgcgcc cgtgaacggg gggaccggtg acgcgcgcgg gcgagcgctc
     2221 gccggagcac gagccgccgc gcctggcggc gggtgacgag ggtgaccccg tgttcgacga
     2281 gctcggacgc tggttcgctg cggcgccggc gccccgtggc atcgacgcga cggcgctcgc
     2341 gcgcgtcgcg cagcggctcg acggcgtcgg acggcgccgc cgggtcacgt ccctacgcgc
     2401 gctcgccgct gcctttgcac tcgtgaccgt cgcgaccggc tccgccgcga tgtggcaaag
     2461 gctcggacct tcgtcgcatg cgggctcgcc gtccagcggc gttcgagcag ccgccccgcc
     2521 gaggcaggaa agaatcgcgc cgcatcatcg gcgcgcagcg agccccgcgg acacgaacgc
     2581 cgagctgccg gcgaccggcc ccgttgcggc gccgagcgcc ttcgtatcgc cgtcgcagag
     2641 cgccgcccgg gcgccgagcc ccgtcgccct gcgcgccgac cgctcgcccg
//
LOCUS       DATIML010000587         2549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5031055, whole genome shotgun sequence.
ACCESSION   DATIML010000587 DATIML010000000
VERSION     DATIML010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5031055"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1180)
                     /locus_tag="VLJ38_10075"
     CDS             complement(<1..1180)
                     /locus_tag="VLJ38_10075"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HSU39909.1"
                     /translation="MKIAVVGTGYVGLVAGACFADSGTHVTCVDVDEQKLEKLRRGEV
                     PFFEPNLAELVKRNWPHRLDFTSNLAQAIDGREVVFIAVGTPPQEDGSADLTHVLTVA
                     EQVAKTAKHDLALVTKSTVPVGTNERVREVVRKHAKHHISVVSNPEFLKEGDAVNDFL
                     KPDRIVIGTDDDRAFEWLSRLYAPFNRQRNRLQRMSPKSAEIVKYAANAMLATKISFM
                     NEIARLCDVAGGDAEHVRLAVGSDERIGMQFLYPGLGFGGSCFPKDLRALVQTGKELD
                     VELTVANAAWQANAGPVTFLLRHMEGDLGGLKDKVIAVWGLAFKPRTDDVREAPGLRL
                     IREVVKRGARVQATDPEALNTARAQLQLDGVLDQVKLVDDEYAACEGADALVLATEWS
                     E"
     gene            1328..2500
                     /locus_tag="VLJ38_10080"
     CDS             1328..2500
                     /locus_tag="VLJ38_10080"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HSU39910.1"
                     /translation="MALFGVAAGAARGRLRHATVSVLSSAKEAARSRAPERTAAVAPA
                     GGALATGAAASSVAAGTPAPFVIVAAGDVNLGRECGQAILQDARYDPFRFMAPIWGDA
                     DLRFANLESQLSDQDGETQSPHNRLIFTGPPGGAETLAQAGIAVVSTANNHAWDYGRG
                     ALFETLDNLARARVAKAGTGRTLAEAYEPAIVEAHGRRVAVVAVTQIWNAGPIEQHEG
                     RNYVAWARPGRVQAALERARRESDFVILSYHGGVEYVDSPTDATRRFIDGALKTGLVD
                     VVIGHHPHVPQGVAFRRGRPVFYSLGNFVFAGHTWAPWTLVGFAARLELGAEHELKVS
                     ACPFALDGHLPKPIGPSEPQSAEVRAHLVETSASVGEAVVGAADARGCFPLGPQTR"
BASE COUNT          395 a          860 c          870 g          424 t
ORIGIN      
        1 actcgctcca ttcggtggcg agcacgagcg cgtcggcgcc ttcacaggcc gcatactcgt
       61 cgtccacgag cttgacttgg tcgagcacgc cgtcgagctg cagttgtgcg cgcgccgtgt
      121 tgagcgcctc cggatccgtc gcttgcacgc gggcgccgcg cttgaccact tcgcgaatca
      181 agcggagacc cggcgcttcg cgcacgtcgt cggtgcgcgg cttgaacgcg aggccccaca
      241 cggcgatgac cttgtccttg agcccgccga gatcgccctc catgtggcgg agcaggaacg
      301 tgacgggccc cgcgttggcc tgccaggccg cattcgcgac cgtcagctcc acgtcgagct
      361 ccttgccggt ctgaacgagc gcgcgcaaat ccttggggaa gcagctgccc ccgaagccca
      421 ggcccggata caaaaactgc ataccgatgc gctcgtcgga gccgaccgcg agacgcacgt
      481 gctcggcatc gccgccggct acgtcacaga ggcgggcgat ctcgttcatg aacgagatct
      541 tggtcgcgag catggcattg gccgcgtact tcacgatctc ggcgctcttc gggctcatgc
      601 gctgcaggcg gttgcgctgg cgattgaacg gcgcgtaaag gcgcgagagc cactcgaatg
      661 cgcggtcgtc gtcggtgccg atgacgatgc gatcgggctt caaaaaatcg ttgaccgcgt
      721 cgccttcctt caagaactcc ggattgctga cgacgctgat gtggtgcttc gcgtgcttgc
      781 gcacgacctc gcgcacgcgc tcgttcgtac cgaccggcac cgtgctcttc gtcacgaggg
      841 cgagatcgtg tttggccgtt ttcgccactt gctcggcgac cgtgagtacg tgggtcaagt
      901 ccgccgagcc gtcttcctgc ggcggcgtgc cgacggcgat gaagacgact tcgcgcccgt
      961 cgatggcttg cgcgaggttc gacgtgaagt cgagtcgatg cggccagttg cgcttgacga
     1021 gctcggcgag attcggctcg aaaaagggaa cttcaccgcg gcggagcttc tcgagcttct
     1081 gctcgtcgac gtcgacgcac gtcacgtgcg tgccggaatc ggcgaagcaa gcgcccgcga
     1141 ccaacccgac gtacccggta ccaacaacag cgattttcac ggtgtccgct ctttaacccg
     1201 gctccgccgg ggcagcaaag ccagagtgct cgcgcgtgtc gcaagcgatg ggatactcga
     1261 ccttcgcccg atgaccgcac cacgagcgcc gcgccgtacc gccgggctac tggccctcgg
     1321 ggctaccgtg gcactgttcg gggtcgccgc gggggcggcg cgcggtcgcc tgcgacacgc
     1381 gaccgtgagc gtactttctt ccgcgaagga agccgccaga tcacgtgcgc ccgaacgcac
     1441 cgccgccgtg gcgccggccg gcggtgcgct ggcgacaggc gcggccgcga gctcggttgc
     1501 ggcgggaacg cccgcgccgt tcgtgatcgt cgcggccggt gacgtgaatc tcggccgcga
     1561 atgtgggcag gccattctgc aggatgcccg ctacgacccg ttccggttca tggcaccgat
     1621 ctggggcgac gccgatctac gtttcgcgaa cctggaatcg cagctcagcg atcaagacgg
     1681 tgagacgcag tcgccgcaca atcgtctgat ctttacggga ccgccgggcg gggccgagac
     1741 tctggcgcag gcgggtatcg ccgtcgtctc cacggcgaac aatcacgcct gggattacgg
     1801 ccggggcgcg ctattcgaaa cgctcgacaa cctcgcgcgc gctcgcgtcg ccaaagccgg
     1861 taccgggcga acgctggcgg aagcgtacga gccggccatc gtcgaggcgc acggccggcg
     1921 cgtggccgtc gtcgcggtca cgcagatttg gaacgccggc cccatcgagc agcacgaggg
     1981 tcgaaactac gtcgcttggg cgcgaccggg gcgtgtgcag gcggcgctcg aacgggcgcg
     2041 gcgtgagtcg gatttcgtga tcctctcgta ccacggcggg gtcgagtacg tggactcgcc
     2101 cacggacgcg acgcgacgct tcatcgacgg cgcgctcaag acgggcctcg tcgacgtcgt
     2161 catcggtcac catccgcacg taccccaggg cgtggcgttc cggcgcgggc ggccggtgtt
     2221 ctacagtctc ggcaacttcg tgttcgcagg gcacacgtgg gcgccgtgga cgctcgtcgg
     2281 cttcgctgcg cgtctcgagc tcggcgcgga gcacgagctc aaggtgagcg cctgtccgtt
     2341 cgcactcgac ggtcatctgc cgaagcccat cggaccctcc gagccgcaat cggcggaagt
     2401 gcgcgcgcac ctcgtggaga cgtcagcgag cgtcggcgag gcggtcgtcg gagccgcgga
     2461 cgcgcgcggc tgtttcccgc tcggaccaca gacgcgctga cacgacccgc cggacgtcac
     2521 gcgacgtcgc gttcggtacg aggctttcg
//
LOCUS       DATIML010000588         8973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3007554, whole genome shotgun sequence.
ACCESSION   DATIML010000588 DATIML010000000
VERSION     DATIML010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8973
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3007554"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="VLJ38_10085"
     CDS             complement(<1..503)
                     /locus_tag="VLJ38_10085"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HSU39911.1"
                     /translation="MSPEALRTALGEVVARGDFQVPPYPAVALRLQRILARPNYALAE
                     VADTIAADPALAARVLAVVNSALYRAAEDITSLPRAVNRLGARAVSSLAVAVGVGASA
                     TQAGALFDVKYRVWRRSITCALACQKLAPLRGLDPNEGFLTGLIHGFGRSVAVAAIEQ
                     LLAAQRSV"
     gene            582..944
                     /locus_tag="VLJ38_10090"
     CDS             582..944
                     /locus_tag="VLJ38_10090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSU39912.1"
                     /translation="MSETKTYSGGCHCGAVRYEVKLDLTKPVISCNCSMCGRVGSLLT
                     FVPAGEFKLLQGEDSLSDYQFNKHVIHHVFCKTCGIKSFARGKGRDGGDTVAVNTRCL
                     DGVELDKLNVTSYDGKNK"
     gene            970..2505
                     /locus_tag="VLJ38_10095"
     CDS             970..2505
                     /locus_tag="VLJ38_10095"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HSU39913.1"
                     /translation="MPLWHPSFRLPLIFGAVILLVAALLRIVPGAPRLHLRRSVLLFV
                     FYLGVLGAGTALGEHAGNVVAEGFRFAEALVALLVTVHLGALVLFDLVLRAFRWRPSD
                     ILHDLTLGTGYVFAIFWVMHGMGVNVTGIVATSAVVTAVIGLSLQSTLGNVIGGLSLQ
                     LDDSLREGDWIELENKTQGLVKKVRWRHTLIETRDWDTLIVPNNQLVAQTIKILGRRE
                     GKPIQHRMWVYFNVDHRFAPREVIRTVNAALQAAPLSGVAAEPKPHAICFDFARDGRD
                     SFAYYAVRYWLTDLASDDPTSSAVRERIYAALKRAQIPLALPGTAVFLSSDDTERSER
                     KRRRALDAHRTALRGVAVFSHLSDDELSRLAESARAAPFAAGEVITRQGDEARDLYVL
                     TSGEVDVLVTGGDGVERRVTSLLAPAFFGEMALATGAAREATVVAKTPVDCLLVDKDD
                     FRGLVAARPELGHEVSVVLAERRVGLEAVREGLDQAAKTKRIESESKRILVALKTFFG
                     LEE"
     gene            complement(2646..3758)
                     /gene="ald"
                     /locus_tag="VLJ38_10100"
     CDS             complement(2646..3758)
                     /gene="ald"
                     /locus_tag="VLJ38_10100"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HSU39914.1"
                     /translation="MKIGVPKETKIREYRVGMTPAGVRELTRRGNEVLVERGAGEGSG
                     IGDQFYVEAGARIVPAAADAWAAELVVKVKEPLEPEFTFLREGLVLYTYLHLAAAPEL
                     TRELVRRRVTAVAYETIRTPDGRLPLLRPMSEVAGRMAVQVGASCLERERGGKGVLLG
                     GVPGTRRGRVVILGGGVVGRNAATIAVGMGAQVTLLDIRAKTMEYLEDVFGSSIETLY
                     SNPYNIEEAVTRADLVIGAVLVPGAVAPKLVTEALIQRMEQGSVVVDVAVDQGGCIET
                     CRPTTHDQPTYEVHGVVHYCVPNMPGAVAQTSTWALTNVTLEHAVRIATLGFARAVNE
                     DSALEAGVNTFAGAITCGPVAEAHGLPYVELKTLLA"
     gene            4567..7026
                     /locus_tag="VLJ38_10105"
     CDS             4567..7026
                     /locus_tag="VLJ38_10105"
                     /inference="COORDINATES: protein motif:HMM:TIGR03901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MYXO-CTERM sorting domain-containing protein"
                     /protein_id="HSU39915.1"
                     /translation="MTTLSGCLVSWAGSGNTDDLATAFKYFNVLLDDYQKVGDGAGGD
                     EVVSHDSGYAMRTFAPYSAIAYDWLHDAPGMTEELRAHARARFNAWVTYYTDNGYLKD
                     LAGANYEAGYAFASTLIAIAEGGEAGSNGDAHWATVTNTIWGKDLAGGLGSSGVLAGG
                     DWPEGWQYGPLSVLEHALAARAMADNGVSIPGADTWANSLVLRFANDLTPVTHQVYAA
                     GDSDNTTPNRDPDNSPLIAAIAGPASEQAKSWARKLNSDLGLKNDNPLFDGLALARAG
                     ASAALPSDTPTNHLATGTGNWYMRGSFDAGTVWSVFQCSRRLVDDHQHNDAGNWVLTR
                     GADDVVVDPSPYGTVSTLSSNAPAVDSNALPDGYSPSQGYWGQKTKLDWARQSSSGVA
                     SGRCDYADQFARDDVPSDVSRAVRDFVLVPDGDSGEVVLIDRVVTGDASRSLHLRVRT
                     PGTFSLASNRASATVGASSLAVERVYSSSGTPTVRALPQGTECESSDHSCDLSRIPGG
                     TEYRLDVTGPSAMAIHVIAARGSNASSGAHTELAGDGYRGVVIPRASSPVAVITNDAP
                     SATPASSLSYTAPAGALHVVVDAPVDANGKSSVTATQDGSNCRVQVTPHAGSAGGYDG
                     APLIVQLSSTCAVQDDGVQAASSGSGSSFGSGSSAGTGGTSTSSGTAPGTGGTSTSSG
                     GGSTDTGSGGTSSDDAGTPPATGGTSTDTGTGGSSGSSAQGGSTSAGTGGTAGTGGRH
                     HRRFTWQQASSALGVKLSTQTVNPGEAQANDLSNVSSEDAGGGCSVASTSSGSPGSTL
                     AGLVLGALAVLRQRRRRIALN"
     gene            complement(7559..7891)
                     /locus_tag="VLJ38_10110"
     CDS             complement(7559..7891)
                     /locus_tag="VLJ38_10110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39916.1"
                     /translation="MAASKTECISAKSDVSRVQPWNGRFLKKVSPAGQNIAGHGARPA
                     PEVFFGGEGVMCRAAQREIRRAVIAALRKGFQVVKLEVMRLGAATDASRGVCVCMHGM
                     ISARFRRS"
     gene            7866..>8973
                     /locus_tag="VLJ38_10115"
     CDS             7866..>8973
                     /locus_tag="VLJ38_10115"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU39917.1"
                     /translation="MHSVFDAATKQIGVEPITPPESGSGDRWIGRRIGNYVVDRPLAR
                     GGMGSVYVARHPHLGREVAVKFLAQEVSAEPELAARFLAEARVTASLNHPNIVEILDF
                     GEVDGELYYAMELLRGKSLRAVMREKGRLSGAAMKPYVEQICWALDAAHRAGIVHRDL
                     KPANVLVLEGEPLRLKLLDFGVAKTMSSGPAQTRAGQVLGTATHMAPEQALGDPGRVT
                     PQSDLYSLGAIAYEMLTGLPVFHHESDMMLMVMHVRDAVRPIREHVPEVPSAVARLIE
                     ACLAKDPAARPAGARAVAEALARALANADAVHATTELQAPEQLVSIADRPTRLASTVP
                     PTPVAGAPQPTKPARHVTAPDTTAAAPTVRAAEPA"
BASE COUNT         1469 a         3101 c         2960 g         1443 t
ORIGIN      
        1 acgctacgct gcgcggcgag cagctgctcg atggcggcca cggcgacgga gcgaccgaag
       61 ccgtgaatca agcccgtgag aaagccctcg ttcgggtcca agccgcgcag cggggcgagc
      121 ttttggcagg cgagcgcgca ggtgatcgag cggcgccaga cgcgatactt cacgtcgaag
      181 agcgccccag cttgcgtcgc gctcgcgccg acgcccaccg cgaccgcgag cgacgagacg
      241 gcgcgcgcgc ccaggcgatt gacggcgcgg ggcagcgacg tgatgtcctc cgcggcgcga
      301 tacagcgcgg agttgacgac cgcgaggacg cgcgccgcga gcgccggatc ggcggcgatg
      361 gtgtcggcta cttcagcgag tgcgtagttc gggcgcgcca agatgcgctg caggcgcagc
      421 gcgacggctg gatagggcgg gacctggaag tcgccgcgag cgaccacctc gccgagtgcc
      481 gtgcgtaggg cctccggaga cacgctcgct tagagtagct cgaacggcag ctccggcaca
      541 ccgttggacg cgccgcccac gctcgggtag caggtgggca catgagcgaa accaaaacgt
      601 attcgggagg ctgtcactgc ggcgccgtgc gctacgaggt caagctcgac ctcacgaagc
      661 ccgtcatcag ctgcaactgc tcgatgtgcg gccgggtcgg tagcctgctc acgttcgtcc
      721 ccgccggcga gttcaagctc cttcagggcg aagactcact cagcgactat caattcaaca
      781 agcacgtgat ccaccacgtg ttttgcaaga cgtgcggcat caagtcgttc gcgcgcggca
      841 aaggccgcga tggcggcgac acggtcgccg tcaacacgcg ctgcctcgac ggcgtggagc
      901 tcgataagct caacgtgacg tcctacgacg gcaagaacaa atagcccgag tgtactaacg
      961 tgggggccga tgccgctctg gcacccttct tttcggctcc ctctgatttt cggcgcggtg
     1021 atcctcctgg tcgcggcgct gctccggatc gtgccgggcg cgccgcggct gcatttgcgc
     1081 cggagcgtgc tcctgttcgt cttctacctg ggggtgctcg gcgcgggcac cgcgctcggc
     1141 gagcacgcgg gaaacgtcgt ggccgagggc ttccgcttcg ccgaggcgct cgtcgcgttg
     1201 ctcgtcacgg tgcacctcgg agcgctcgtg ctgttcgatc tggtgctgcg cgcgtttcgc
     1261 tggcgcccgt cggacatcct gcacgatctg acgctaggga ccgggtatgt cttcgcgatc
     1321 ttctgggtga tgcacggcat gggcgtgaac gtcacgggca tcgtggcgac gagcgccgtc
     1381 gtgaccgccg tcatcggcct ctcgctccaa tcgacgctcg gcaacgtgat cggtggcttg
     1441 tcgctccagc tcgacgactc cttgcgcgag ggcgattgga tcgagctcga aaacaaaacg
     1501 caggggctcg tcaaaaaggt gcgctggcgc cacacgctga ttgaaacgcg cgactgggac
     1561 acgttgatcg tgccgaacaa ccagctcgtc gcccagacca tcaagatttt ggggcgtcgc
     1621 gagggaaaac ccatccagca ccgcatgtgg gtctacttca acgtcgatca ccgtttcgcg
     1681 ccgcgcgagg tgatccgcac cgtcaacgcc gcgctgcagg cggcgccgct ctccggggtc
     1741 gcggccgagc cgaaacctca tgcgatttgc ttcgacttcg cgcgtgacgg gcgcgacagc
     1801 ttcgcgtact acgccgtgcg ctattggctc accgatctgg cgagcgacga tcccacgagc
     1861 tcggccgtgc gcgagcgcat ttacgcagcg ctcaagcgcg cccagattcc gctggcgttg
     1921 ccgggcacgg ccgtctttct gagcagcgac gacaccgagc gcagcgagcg caaacgtcgc
     1981 cgcgcgctcg acgcccaccg caccgcgctg cgcggagtgg ccgtgttttc gcacctctcc
     2041 gacgacgagc tctcgcgact cgccgaaagc gctcgcgcgg cgccgttcgc cgcgggggaa
     2101 gtcatcacgc gccagggcga cgaagcgcgc gacctctacg tgctcacgag cggcgaggta
     2161 gacgtgctcg tcaccggcgg cgacggcgtc gaacggcgcg tcacgagcct acttgcgcca
     2221 gctttcttcg gggaaatggc gcttgcgacc ggagccgcgc gcgaagccac cgtcgttgcc
     2281 aagacgcccg tcgactgcct gctcgtcgac aaagacgact ttcgcgggct cgtggcggcg
     2341 cggcccgagc tcggacacga ggtgtcggtc gtcttggccg agcggcgcgt cggcctcgaa
     2401 gcagtgcgcg aaggcctcga tcaagccgcc aagaccaagc gcatcgagag cgaaagcaag
     2461 cggatcctgg tcgcgctcaa gacgttcttc ggccttgaag aatgagccct cgtcccccga
     2521 cgccgccaac ggatgttaac cgccaagacg ccaaggacgc caaggggaac gccaagcatt
     2581 tttttattag tttctgatct tggcgatctt ggcgtcttgg cggttcaact tctcgccgcg
     2641 tgtgctcaag cgagtaacgt cttgagctcc acgtacggca agccgtgcgc ctccgcgacg
     2701 gggccgcacg tgatggcgcc cgcgaaagtg ttgacgccgg cttcgagggc cgagtcctca
     2761 ttcacggcgc gcgcgaagcc gagcgtggcg atgcggacgg cgtgctcgag cgtgacgttg
     2821 gtgagcgccc aggtgctcgt ttgcgcgacg gcgccgggca tgttgggcac gcaatagtgc
     2881 acgacaccgt gcacttcgta cgtcggctgg tcgtgcgtgg tcgggcgaca cgtctcgatg
     2941 cagccgccct gatcgaccgc cacatccacg acgacactcc cctgctccat gcgctgaatc
     3001 aaggcctcgg tcacgagctt tggcgcgacg gcgcccggca cgagcacggc gccgatcacc
     3061 agatcggctc gggtgacggc ttcctcgatg ttgtaggggt tcgagtacag cgtctcgatc
     3121 gagctgccga acacgtcctc cagatattcc atcgttttcg cgcggatatc gagcagcgtc
     3181 acctgcgcgc ccatgccgac cgcaatcgtc gccgcattgc gacccacgac cccgccgccc
     3241 aaaatcacga cccggccacg ccgcgttccc ggcacgccgc cgaggagcac gcccttgccg
     3301 ccgcgctcgc gttcgaggca actcgcgccg acttgcacgg ccatgcgtcc ggccacttcg
     3361 ctcatcgggc gcagcagcgg caagcgtccg tccggcgtcc gaatggtttc gtaagccacc
     3421 gcggtcacgc gccgtcgcac gagctcgcgc gtgagctccg gtgccgccgc gagatgcagg
     3481 tacgtgtaga gcacgagccc ctcgcgcagg aacgtgaatt caggctcgag cggctctttg
     3541 actttcacga cgagctccgc ggcccaagcg tccgcggccg cgggcacgat gcgcgctccc
     3601 gcctccacgt agaactgatc gccgatgccg ctgccttcac cggcgccgcg ttcgacgagc
     3661 acctcgttcc cgcgccgcgt gagctcgcgc acgcccgccg gcgtcatccc cacgcggtac
     3721 tcccgaattt tcgtttcctt cggcaccccg atcttcatcc ccgcaatcct agtcctgctt
     3781 cgttcagaac ccgcaacgcc ccccgtttag cgctgagaaa tccgcatttt ctcgtggttt
     3841 tggtcttcgc gagcgctccg gttttgggcg accttgcaga gccgcgctcg ggcgggcgaa
     3901 aagcggcggc gtcgcgtctc aggccctgat tttggagtcg ctggcgcgtc attaatcggt
     3961 cattgccagg gctcccgcag tggccgtcac gatgtaggca aacgcgttcg tacgactgcg
     4021 gtcgagcggc tgaacgcgtc agcttgcctc gcgaagcgcg ccccgctgcc ggcgtaagca
     4081 ctggggcgca gtgcctcgag cggcgcacga ggacgtttat gtcgtcgctc gaggctcacg
     4141 cgcattgcgt catgcaaaaa ccaagaaccc tactggtcgt acatgggatt ggtaagacca
     4201 cgtgtgagcg cgacgaatcg ctacgggcgg tgcgcgacac gctgacgagg tgctgacaat
     4261 ccggtacgcg tcagttcatg cgagcgagcg ccggtgcgcg ctgctagttg ccccgacatg
     4321 tcaaaactcc accggcgcct attggcctct ggactcctcg ccagcattcc cgctctcagc
     4381 gtcaacgcct ttgccgctcc gtcaggtgcg catccgaggc tttggctcga cgccgcgacg
     4441 aaacaaggcc tttccggcca agttggaatc gcaaatagcc ccgtgacacg cggcgctgcg
     4501 cgctgcagcg ccgcacgcaa cagcccgtct gattatgacg atggcggctg gcagggtttt
     4561 gaattcgtga ccacgctttc gggctgtctg gtttcctggg cagggtccgg gaatacggat
     4621 gatctcgcga cggcgttcaa gtacttcaac gtactgctcg acgattatca gaaggtgggt
     4681 gacggcgccg gcggcgacga ggtcgtgtcg cacgactccg gctacgcgat gcgcacgttc
     4741 gcgccgtatt cggcgattgc gtacgactgg ctccacgacg cgccgggcat gacggaggag
     4801 ctgcgtgcgc acgcccgcgc gcgcttcaac gcctgggtca cctactacac ggacaacggc
     4861 tatctgaagg acctggccgg cgccaattac gaggccggct acgccttcgc ctcgacgctg
     4921 atcgccatcg ccgaaggcgg cgaggccggc tcgaacggtg atgcccactg ggccacggtg
     4981 accaacacca tttggggtaa ggacctggcg ggcggactcg gctcgagcgg cgtgctcgcc
     5041 ggcggcgact ggccggaagg ctggcaatat gggccgctca gcgtgctcga gcatgcactc
     5101 gcggcgcggg ccatggccga caacggcgtg agcatccccg gcgccgacac gtgggccaat
     5161 tcgctcgtac tgcgcttcgc gaacgatctc acccccgtca cgcaccaggt ctacgcggcc
     5221 ggcgactccg acaacacgac gccgaaccgc gaccccgaca atagcccgct catcgccgcg
     5281 atcgcgggtc cggcgagcga gcaagccaaa tcctgggcgc gcaagctgaa ctccgatctc
     5341 ggcctcaaga acgacaaccc gctcttcgac ggtctcgcgc tggcgcgcgc cggcgcgagc
     5401 gccgctttgc cgagcgacac gcccacgaac cacctggcga cgggcacggg caattggtac
     5461 atgcgcggca gcttcgacgc gggcacggtt tggagcgtgt ttcagtgctc ccggcggctc
     5521 gtcgacgacc accagcacaa cgacgcgggc aactgggtgc tcacgcgcgg cgccgacgac
     5581 gtcgtcgtcg atccctcacc ctacggcacc gtctcgacgc tgagcagcaa cgcgcccgcc
     5641 gtcgattcga acgcgctgcc ggacggctac tcaccgagcc aaggctattg gggccaaaag
     5701 accaagctcg actgggcgcg ccaatcgagc tcgggcgtcg cgagcggacg ctgcgactac
     5761 gccgatcaat ttgcgcggga cgacgtgccg agcgacgttt cgcgcgccgt gcgcgacttc
     5821 gtgctcgtgc cggacggcga ctcgggcgag gtcgtgctca tcgaccgcgt cgtgacgggc
     5881 gacgcgtcgc gcagcttgca cctgcgcgtg cggacgcccg gtacgttctc gctcgcgtcc
     5941 aatcgtgcaa gcgcgacggt cggcgcctcc tcgctcgccg tggagcgcgt gtattcgtcg
     6001 agcggcacgc cgaccgtgcg tgcgctaccg caaggcacgg agtgcgagtc gtccgatcac
     6061 agctgcgatc tttcgcgcat ccccggcggc accgagtatc gcctcgacgt gacggggccg
     6121 agcgcgatgg ccatccacgt catcgccgcg cgcggcagca acgcgagctc gggcgcccac
     6181 accgagctcg cgggtgacgg ctaccgcggc gtcgtgatcc cgcgcgcttc atcgcccgtc
     6241 gccgtcatca cgaacgacgc gccgagcgcg accccggcga gctcgctctc ctacacggct
     6301 ccggccggcg cgctccacgt cgtggtcgac gccccggtcg acgcgaacgg caagagctct
     6361 gtcaccgcga cgcaggacgg ctcgaactgt cgcgtgcaag tcacgccgca cgccggcagc
     6421 gcgggcggct acgacggcgc gccgctcatc gtgcagctca gctcgacctg cgccgtgcag
     6481 gatgacggcg tgcaggcagc gtcgagcggc agcggctcct cgttcggcag cggaagctcg
     6541 gctggcacgg gcggcacctc cacgagctcc ggcacggcgc cgggaaccgg cgggacttcg
     6601 acgagcagcg gcggaggctc cactgacacg ggcagcggcg gcacctcgtc cgacgacgcc
     6661 ggaacaccgc ccgcaaccgg cggaacctcc accgacacgg gcaccggcgg cagcagcggc
     6721 tcgagcgctc agggcggctc gacgagcgcg ggcacgggcg gcacggcagg cacgggcgga
     6781 cggcaccatc gccgcttcac ctggcagcag gcctcctcgg ccctcggcgt gaagctctcc
     6841 acccagaccg tcaatccggg cgaggctcag gcgaacgacc tctcgaacgt ctcgtcggag
     6901 gacgcaggcg gcggctgcag cgtggcatcc acatcgagcg gcagccccgg cagcaccctc
     6961 gccgggctcg tgctcggcgc gctcgcggta ctcaggcagc gccggcggcg gatcgcgctg
     7021 aactgacgcc ctccacaacg cgcgagcccc acgttgccac tctcgcgagt cggcggcgtg
     7081 gggctttcgt ttgcaatgcc gatgggctcg agagctcggc cgtggggatc gccggttgcg
     7141 tgcgctcgcg cacaaaactg cagcgatttc gtacccgctc ggccaagccg tctatgaatc
     7201 agcgcctgct cgaaaggtcc gtcgagcgtc gttgataagc cgacgtctcc gcgctctccc
     7261 tcgctcgtcc cttcagtgac gtccacgtcg accaccgttg cgcaatagac ctctcatcga
     7321 gtcgaggaca agcacgcgag gcacgcttct ggcgcacccg gccgcgacga gcgcgggcag
     7381 tgtgagtcgt ttctgatcgc ggatttgcct cgacacgatt cgttgcactc gcgtcgcgag
     7441 cttgcccacg atttcgaaaa tctagcgcgc gcggcacgca gcgggcgcac tgcgagctct
     7501 tgctcacttc gacgatttgc gtcgcgtttc gatcctcgat accccgcgag agcgcctatc
     7561 aggagcgtcg gaaacgcgcg cttatcatgc catgcatgca gacgcacaca cctctcgacg
     7621 cgtccgttgc tgctccgaga cgcatcacct cgagtttcac cacctgaaag cctttgcgca
     7681 gggcggcgat caccgcgcgt cgaatctcac gctgcgctgc gcggcacata acgccctcgc
     7741 cgccgaagaa gacttcgggc gcagggcggg ccccgtggcc ggcgatattc tgaccggcag
     7801 ggctgacctt cttcagaaaa cgtccgttcc aaggttggac ccgggaaacg tccgattttg
     7861 ccgagatgca ttccgtcttc gacgcagcca cgaagcagat cggcgtcgag ccgataacac
     7921 cgccggaatc cggttcgggc gatcgctgga ttgggcgccg tatcggaaac tacgtggtgg
     7981 accgcccgct cgcgcgaggt gggatggggt cggtgtatgt cgcgagacat ccgcacctcg
     8041 ggcgtgaagt ggcggtgaag tttctcgcgc aagaggtgag cgccgagccg gagctcgcgg
     8101 cgcgcttcct cgccgaggcg cgcgtgacgg cgagcttgaa tcacccgaac atcgtcgaga
     8161 tcttggattt cggcgaggtc gacggcgagc tctattacgc catggagctt ttgcgcggaa
     8221 agagcctgcg cgcggtcatg cgcgaaaagg ggcgcctttc gggcgccgcc atgaagccgt
     8281 acgtcgagca gatctgctgg gcgctcgacg cggcgcatcg cgccggcatc gtgcatcgcg
     8341 atctgaagcc cgcgaacgtg ctcgtgctcg agggcgagcc gctgcggctc aagctcctcg
     8401 atttcggcgt cgcgaagacg atgtcgagtg gacccgcgca gacgcgcgcc ggtcaagtgc
     8461 tcggtacggc gacgcacatg gcgcccgagc aggcgctcgg cgatccggga cgggtgacgc
     8521 cccagagcga cctgtattcg ctcggcgcga tcgcttacga gatgttgacg gggctgcccg
     8581 tttttcacca cgagtcggac atgatgctga tggtgatgca cgtgcgcgac gccgtgcgtc
     8641 ccatccgcga gcacgtgccc gaggtgccgt ctgccgtcgc gcgcctgatc gaagcctgtc
     8701 tcgccaagga tcccgcggcc cggcccgccg gtgcacgtgc ggtcgccgaa gcgctcgctc
     8761 gagcgctcgc caacgcggac gccgtgcacg ccacgacgga gcttcaagcg cccgaacagc
     8821 tcgtttccat tgcggaccga ccgacgcgcc tggcgtcgac ggtgccgccc acgcccgtcg
     8881 cgggtgcgcc ccaaccaaca aaacctgcac ggcatgtgac ggcgccggac accacggcgg
     8941 ccgcgccgac cgtccgtgca gcagaacccg ccg
//
LOCUS       DATIML010000589         6566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3871087, whole genome shotgun sequence.
ACCESSION   DATIML010000589 DATIML010000000
VERSION     DATIML010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6566
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3871087"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2236
                     /locus_tag="VLJ38_10120"
     CDS             <1..2236
                     /locus_tag="VLJ38_10120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39918.1"
                     /translation="QPWLEPLQALLRALEDQHPETAAFAHARASRAALELLNQGPLLA
                     PEARSPAREDLLQGLTAALGSLEAECVVVVVDDVHHADDLTRELVRRLAASECRGSRL
                     LLLCTAAPEPALEAAFVERFQHVTLAPLSEAEIDAAIRAMLAVDFPSPTLVNRAFEVS
                     QGNPYILGVYLRALIDEGMLRRDRHRGFYLDWQRGETVAVPQAGKPPLAVSSVTALFE
                     WRLHKLTPSELELASGAALLGASFDAATLAAIVELPLSQVEQTLAALCRHQVLELLGS
                     DRYRFGHATLTRLLSERVDASEAKLLHRRAAAVLRTRKAGTPTPPSALARHLSACGSH
                     RKAALSFAAAGHWYLAAHRREDALECFDSAIRELMSCRAAARLYADELVELQELTGDV
                     AVSLRKYQVATSAYRQALAFGSADPIRTARQYRKLAGAQQRDRDKAQDSLRRAIMVLD
                     AASERAGEYHVEWIQVHLDTMWLHYWKHENDAMLEIARQIAPEVEAFGTAPQRASLQF
                     NLAVGLMQHHRYVTGAAELAHAERALAIYESLQDRTNVAMCRFVRSMILLFAGDLDGA
                     EAGFQAVLAISEKATSVTIRVRALTFLCIVERRRKAREQVRRLATAAQSLAKEHEMLE
                     YQGTAMANLAWVALEDGEFGECERLVNAAVSAWDASPLNVFRWTGLLPLMASIVARGP
                     VPADAAKLASIAAELLHPLQQRLPEPLVAELTRLHAVEPSAGERAHLIARNALALAAD
                     IGLI"
     gene            2343..2426
                     /locus_tag="VLJ38_10125"
     tRNA            2343..2426
                     /locus_tag="VLJ38_10125"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2377..2379,aa:Leu,seq:caa)
     gene            2402..2812
                     /locus_tag="VLJ38_10130"
     CDS             2402..2812
                     /locus_tag="VLJ38_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39919.1"
                     /translation="MGSTPTFGTQLMLARYQIVRGKRPPGNPLPEGRRIDTRKHTRHF
                     LRPEAAQVDAFIADPSAQGFARFAKEYRATIEQRFARDRRPFDELAALAKDEDVFLGC
                     NCPTRWNPDAKHCHTTVALAFMRRKYPKLEIEMP"
     gene            complement(2839..3306)
                     /locus_tag="VLJ38_10135"
     CDS             complement(2839..3306)
                     /locus_tag="VLJ38_10135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39920.1"
                     /translation="MIRHLTNDELAVLAASTLAETAFLLAEPSPHAGHWQHDWACAVV
                     PFEAAVHGRLVVAAPVALAAQVAAEMPLVATADEALLQAGHAVAGLAGIIASAVASAI
                     FETAGRFRLGAPSVVSCEPPLAPGERANRVTLVNEAGQPVRVELVLGNGAFSA"
     gene            complement(3303..3689)
                     /locus_tag="VLJ38_10140"
     CDS             complement(3303..3689)
                     /locus_tag="VLJ38_10140"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39921.1"
                     /translation="MLSVLVIDASSVKRRMLVGALGVCRLPPHEVLEAASDHEAQAVL
                     DARHVDVVLCALDSPQIDARALLTKMRAEPVLATLPIVLVGCERSPELLGELEALGMR
                     GFLREPFRPEALGQLLREILRLSEPS"
     gene            complement(4143..5192)
                     /locus_tag="VLJ38_10145"
     CDS             complement(4143..5192)
                     /locus_tag="VLJ38_10145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39922.1"
                     /translation="MQSSSSRENADGQRRREGIFYARTVSGVELPIIDVTHPAFAVTL
                     SADEQRTRIDAFMRESQPLDKLPPVLRRLLLRFFLRGSLFARGMSSTGGSYLSGMHTY
                     LFKLGPDNLNLPDITRVDRKIAASLPAFGMRVRVCDIARLLADSTRTALEGAAAERPL
                     YLLNIAGGPAIDSLNALILLARERPDVLTGRHVEVVVLDLDTDGPEFGARALSALLAP
                     GAPLAGLQARFRRVHYDWSNPTELVPVLEEARGAHAVTLASSEGGLFEYGSDEQIVAN
                     LGALRAGTGAGFALVGSVTRGDAPMQRLRSQSPVPTRPRGLARFSALIEPAGFSVERA
                     IERPFSDHVVLVPRA"
     gene            6073..>6566
                     /locus_tag="VLJ38_10150"
     CDS             6073..>6566
                     /locus_tag="VLJ38_10150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39923.1"
                     /translation="MASVAVVGFEDVHTAVSWRRAHEELVRLSVKRAGLDFEEGRWLL
                     RTFRAGAHRELGYGSFHEYTERLFGYGPRLTQEKLRVAEALETLPETAAELKAGTRSF
                     SAVRELTRVAVPATEREWLRAARGRTVREVEELVSGHPAGSRPGDVPDASARRHVLRF
                     EVSG"
BASE COUNT         1092 a         2249 c         2223 g         1002 t
ORIGIN      
        1 gcaaccgtgg ctcgaaccct tgcaggcgct cctgcgtgcg ctcgaggatc agcatcccga
       61 aacggcggcc tttgcgcacg cccgcgcgag ccgcgccgcc ctcgagctct tgaaccaggg
      121 cccgctgctc gcgccggagg cccgcagccc cgcgcgcgaa gacctgctgc aaggcttgac
      181 ggcggcgctc ggttcgctcg aagccgagtg cgtcgtggtc gtcgtggacg acgtgcacca
      241 cgccgacgac ctcacgcgcg agctcgtgcg ccggctcgca gcgagcgagt gccgagggag
      301 ccgcctactc ttgctctgca ccgcggcacc ggagccggct ctcgaagcgg cattcgtcga
      361 gcggtttcag catgtcacgc tcgcgccgct cagcgaggcc gaaatcgatg cggccatccg
      421 agcgatgctt gccgtcgatt ttccttctcc gacgctcgtg aaccgcgctt tcgaggtctc
      481 gcaggggaac ccctatatcc tcggtgtgta cctgcgtgcg ctgattgacg aaggcatgct
      541 gcggcgcgat cggcaccgcg gcttttacct cgactggcag cgcggcgaga cggtggccgt
      601 gccccaagcc ggcaagccac cgctcgccgt gagctcggtg acggcgctct tcgagtggcg
      661 gctgcacaaa ctcacgccct ccgagctcga gcttgcgagt ggcgcggcgc tgctcggcgc
      721 gagcttcgac gcagcgacgc tcgccgcgat cgtcgagctt ccgctctccc aggtcgaaca
      781 gacgctcgcg gcgctctgcc gccatcaggt gctcgagctg ctcggctccg atcgctaccg
      841 cttcggccac gcgacgttga cgcgcctctt gtcggagcgc gtggacgcga gcgaagcgaa
      901 gctcttgcat cgccgtgcgg ctgcagtttt gcgcacgcgc aaggccggca cgccgacgcc
      961 gccgagcgcc ttggcccgac atttgagcgc gtgcggctcg caccgcaagg ccgcgctctc
     1021 gttcgcggcc gcgggccact ggtacctcgc tgcccaccgg cgggaggacg cgctcgagtg
     1081 tttcgactcc gcaatccgcg agctcatgtc gtgccgagcc gccgcgcgtc tttacgcgga
     1141 cgagctcgtc gagctccagg aactgacggg cgacgtggcg gtgtcgctgc gcaaatacca
     1201 ggtggcaacg agcgcctatc gccaggcgct cgccttcggg agcgccgatc ccatccgcac
     1261 ggcgcggcag tatcgaaagc tcgccggcgc acagcagcgc gatcgggaca aagcgcagga
     1321 ctcactgcgg cgagcgatca tggtgctcga cgcggcgagc gagcgggcgg gcgaatatca
     1381 cgtcgaatgg attcaggtcc acctcgacac gatgtggctt cactactgga aacacgaaaa
     1441 cgacgccatg ctcgagatcg cgcgccagat cgcgcccgag gtcgaggctt tcggtacggc
     1501 gccccaacgc gccagtctcc aattcaacct ggccgtcgga ctcatgcagc atcaccgcta
     1561 cgtcacgggc gcagccgagt tggcgcacgc cgagcgcgcc ctggccattt acgagtcgct
     1621 acaagatcgc acgaacgtcg cgatgtgtcg cttcgtgcgc tccatgatcc tcctgttcgc
     1681 gggcgatctc gacggcgccg aggcgggctt tcaagccgtg ctcgccatct ccgaaaaggc
     1741 gacgagcgtc acgatccggg tccgcgcgct cacgttcctc tgcatcgtag agcgccggcg
     1801 caaggctcgc gagcaggtgc gaaggctcgc gaccgcggcc cagtcgctcg ccaaagaaca
     1861 cgagatgctc gagtaccagg gcaccgccat ggccaatctc gcctgggtgg ccctcgaaga
     1921 cggcgaattc ggcgagtgcg agcgactcgt caacgctgcc gtcagcgcct gggacgcttc
     1981 gccgctcaat gtctttcgct ggaccgggct cttgccgctg atggcgagca tcgtggcgcg
     2041 cggccccgta cccgccgacg ccgcaaagct cgcgagcatc gccgcggagc tcttgcatcc
     2101 cttacagcag cgcctgcccg agccgctcgt cgccgagctc acgcgcttgc acgccgtcga
     2161 gccgtccgcc ggcgagcgtg cccatctcat cgcgcggaac gctctcgcgc ttgccgcgga
     2221 catcggattg atctgacacc tgggtggccg accggacgga gcaccgccgg agccatgctg
     2281 atcaaccgct accgccagca ggcaaggtct gctacggaac tcgcgcaaga atcgcagaac
     2341 gagccgaagt ggcggaaccg gcagacgcgg cggactcaaa atccgttgag gttacactcg
     2401 tgtgggttcg actcccacct tcggcactca gctcatgctg gcccgctacc aaatcgtgcg
     2461 tggcaagcgc cctccgggga accccctgcc ggaagggcgt cgcatcgata cgcgcaagca
     2521 cacgcgccac ttcttgcgcc ccgaggcggc gcaagtcgac gcgttcattg ccgacccgag
     2581 cgcgcagggg ttcgcgcgct ttgccaaaga gtatcgcgcg acgatcgagc agcgcttcgc
     2641 gcgcgaccgg cgaccgttcg atgagctcgc ggcgctcgcc aaggacgaag acgtgtttct
     2701 cggctgcaat tgcccgacgc gctggaaccc cgacgcgaag cactgccata cgacggtcgc
     2761 gctcgcgttc atgcgccgga agtatccgaa gctcgagata gagatgccgt gaggcgcgaa
     2821 cggcgcgcgt gctgacgttc acgcgctgaa cgcgccattg ccaagcacga gctcgacgcg
     2881 cacgggctgg cccgcttcgt tgacgagcgt cacacgattg gcgcgttcac ccggcgcgag
     2941 cggcggctcg cagctgacga cggacggcgc gcccaggcga aagcgaccgg cagtctcgaa
     3001 aatcgcgctg gcgacggcgc tggcgatgat gccggcgagg cccgcgacgg catggcccgc
     3061 ctgcaggagc gcctcgtcag ccgtggcgac gagcggcatt tcagccgcaa cttgggccgc
     3121 gagagcgacg ggcgcggcga cgaccaagcg gccgtgcacg gcagcctcga acggcacgac
     3181 ggcgcacgcc cagtcgtgct gccagtgccc ggcgtgtggt gagggttcgg cgagcaagaa
     3241 ggccgtttcg gccagagtgc tcgccgcgag cacggcgagc tcgtcattcg tcagatgtct
     3301 aatcatgaag gctccgacag gcgcaagatc tcgcggagga gctggccgag cgcttcgggt
     3361 cgaaacggct cgcgcaagaa gccacgcata ccgagcgctt cgagctcgcc gagcagctca
     3421 gggctgcgct cgcaaccgac caagacgatc ggcaacgtgg cgagcacggg ctcggcccgc
     3481 attttcgtga gcagcgcgcg cgcgtcgatt tgaggtgagt cgagcgcgca aagcacgacg
     3541 tcgacgtggc gcgcgtcgag cacggcttgc gcttcgtggt cgctcgctgc ttcgagcact
     3601 tcgtgcggcg gcaggcggca cacgccgagc gcaccgacga gcatgcgtcg cttgacactc
     3661 gaggcgtcga tcacgagcac gctcagcatg gccgaggtgt gtgcaagcga cgcgccaggg
     3721 cgcacacgcg caatcggagc ctgattgctc ggattcacta ctcgatggca cgccttccga
     3781 tcctgatttt cggatcgctg tcctcggact cggacacgtc attgcggatc gcgcagcgaa
     3841 catcggcgat ttccgctgtt tccaagtggc tcgttcgttg cacgacgcga cgcagcacaa
     3901 gccaccttcg cttttctgcc cgaggcaagt catgcccaga acgctccgct cgaagtccaa
     3961 gcctgcagtc gatcaggatc agatcccgac cgtgcgccct ccccgcgcgc cgtcgagcga
     4021 tccgcggaag ctcccggttc cacgtgagca cgcaccctcg cccggcctcg caacgctcgc
     4081 gcgcgagctc atgctcgctg aagccgacga agcgctcgac cgctcgcgtc cggcgccgtc
     4141 atctacgcgc ggggcacgag cacgacgtgg tcgctgaacg gtcgctcgat ggcgcgctcg
     4201 acgctgaagc ccgcgggctc gatcagcgcg ctgaaccgcg cgagtccacg aggccgcgtc
     4261 ggtacgggac tttggctacg gagccgttgc atgggcgcgt ccccgcgcgt cacggagccg
     4321 acgagcgcga agccggcgcc cgtgccggcg cgtagcgcgc caaggtttgc cacgatttgc
     4381 tcatcggagc cgtactcgaa gagtccgccc tcggacgacg cgagcgtcac ggcatgcgcc
     4441 ccgcgcgcct cctcgagcac ggggacgagc tcggtgggat tcgaccagtc gtagtgcacg
     4501 cgccgaaagc gcgcctgcag gccggcgagc ggggctcccg gcgcgagtag ggcgctcagc
     4561 gctcgcgcgc cgaactcggg gccgtccgta tccagatcga ggacgacgac ttcgacgtgc
     4621 cggcccgtga gtacgtcggg acgctcgcgc gcgagtaaaa tcagcgcgtt caggctgtcg
     4681 atcgccggcc caccagcgat gttcagcaag tacaaaggcc gttcggcggc cgcaccctcg
     4741 agcgcggtgc gagtactatc ggcgagcagg cgcgcgatgt cgcaaaccct cacccgcatg
     4801 ccgaacgcgg gcagcgacgc ggcgatcttg cggtcgacgc gcgtgatgtc cggcaggttc
     4861 aggttgtcgg ggccgagctt gaacaagtag gtgtgcatgc cgctcaggta cgagccgccc
     4921 gtcgagctca tcccgcgcgc gaacagcgag ccccgcagga agaagcgcaa gagtagccgg
     4981 cgcaggaccg gcggcagctt gtcgagtggc tgcgactccc gcatgaacgc gtcgatgcgc
     5041 gtccgctgtt catccgcgct cagcgtgacg gcgaacgccg ggtgcgtcac gtcgatgatg
     5101 gggagctcga cgccgctcac cgtccgcgcg tagaaaatac cctcacgccg acgctgcccg
     5161 tccgcgttct cccgagaact cgacgactgc atcgaggatc attacacaac ttcgcacaaa
     5221 aactcaatgg cctcgagcga gcgcgcgctc aggacgctac acaaatgtgc ggcaatcggc
     5281 cgtaggcgcc tgcgtcccga cgcgtggaat gaccgcacag accgtccgcg gccaatcacg
     5341 gctgctgctc ggagctgcgc gttcagttga cgttttcgtg ttcgggaaat gagctgcccc
     5401 cacgtgggtc cggcgctgca cgtcctgcgt gctcggcctt cggcctccgc gcgcaggcgc
     5461 ccgcctagcg cccgctgcgc ggtcgcgggg gcgcggcgac ggcgggcgga gtcggggcgg
     5521 agcgcgaaac atgctcgtgg ggcgacagcg ggcggaattg cacgaggtgc cggcgccgtg
     5581 aacagacgcg cgatgagcta agcggaactc ggccggcgac tacacgccaa gcacccgatc
     5641 accggcaccg ggtacgctat tccgctccac gccgcgaaga cggtgcgatg acttcagcgc
     5701 ccgccgcggc gtggtgctcg gcagcggggc tgggggctcg atacggcggc catgtcagtc
     5761 gatgttacgg cccgccccgc cgcccgagcc tttgggttgt ggtgttgcag cgagctcgtg
     5821 cggggctgaa agagcaggtg ttccgtcgat ttgtgtggac agctttccgc aggtgaagag
     5881 cgcacgtccg ttcaacgagc tctgaatagc gtcgtcgcgc tcgtccgttc gatggagcgc
     5941 gcgtttcgcg acgccgacgt ttcgaccgcg gtccgaggcc gagaaacgcg cgcagcgcgg
     6001 ggcacgtgaa gccgaaaaac agcgtgatag aggagatcgt cgactcagaa gcacaacgag
     6061 ggagggttcg acatggcatc agtcgcggtg gtcggattcg aggacgttca cacggccgtc
     6121 tcctggcggc gcgctcacga agagctcgtt cgactctcgg tgaagcgcgc gggactcgat
     6181 ttcgaggaag ggcgctggct gctgcggacc ttccgcgcgg gagcccatcg cgagctcggg
     6241 tacggctcct ttcacgagta caccgagcgg ctcttcggct atggcccgcg cctcacgcag
     6301 gagaagctcc gggtcgctga ggcactcgaa acgctgcccg agacagccgc agagctcaaa
     6361 gcgggaacgc gcagcttctc cgcggtccgg gagctcacgc gcgttgcagt tccagcgacc
     6421 gagcgcgagt ggcttcgagc agcgcggggg cgcaccgtgc gcgaggtgga agagctcgtg
     6481 tccggtcacc ctgctggaag ccgaccgggc gatgtcccgg acgcgagcgc caggcgccac
     6541 gtgctccgct tcgaggtctc gggcga
//
LOCUS       DATIML010000590         6568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3585036, whole genome shotgun sequence.
ACCESSION   DATIML010000590 DATIML010000000
VERSION     DATIML010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6568
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3585036"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1770)
                     /locus_tag="VLJ38_10155"
     CDS             complement(<1..1770)
                     /locus_tag="VLJ38_10155"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiheme c-type cytochrome"
                     /protein_id="HSU39924.1"
                     /translation="MAGLEVASYVALAVAAAWLVWRTGDARLRALTALGLAGALVASL
                     VRGAREAAPVSPIAVVRERAHAVGSGACRACHPSQFASWERSFHRTMTQVATPATVLG
                     PWQGVKLEVEGRNVELSRKGGELWARLPDPDLVAASIRAHSPTPSAAAPLVERRVLLA
                     TGSHHQQVYWVGGERGNELRLLPITYLIAEKRYVPRRDAFLQPPDAPPHAIRWNSNCI
                     MCHATRGEPALDEQRDVFASDAVELGIACEACHGPGGAHVEKQRAPLARLLTHLRDDA
                     DASIVNPARLSAERASAVCGQCHAYFVPRAEDRFWQTGFSDYSPGDALAPTRVLLAPA
                     AAGSPDRAAPASAAPGVSGASVEATTESLFWGDGTIRVGGRELNGLERSACYARGHGK
                     RQIACLSCHSMHASEPNDQLRRAEPVDVACGRCHAAEARRGTEHTHHAAGSAGSSCVG
                     CHMPFTSYALFSAIRSHRIDTPSASATARDGRPNACNLCHLDRTLGWTARTLDAWYGT
                     RAPSLGSAEPAPVDDEPPRALVELLSGDAATRVVVAAAFGRAEARAATNSVWQARALA
                     ELLDDPYAAVRKVACDALHATPEF"
     gene            1830..3560
                     /locus_tag="VLJ38_10160"
     CDS             1830..3560
                     /locus_tag="VLJ38_10160"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043138 - 3'-5' DNA helicase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HSU39925.1"
                     /translation="MTDSELPARVERLRERVLTAPAEERPGLAEELEALRGLYRSNSS
                     AFTAELVGMLRGIAADLDSAPPGEALARELKSTFGFDEFRPGQLAIVRTVLAGRDCIG
                     VMPTGAGKSLTYQLPARLLGGVTLVVSPLIALMKDQVDALAEVGLRSTFLNSSLSADE
                     RRERVARIRSGEIEIVYAAPEGLEASVGRVIADLDLRLIAVDEAHCISQWGHDFRPAY
                     RNLAGFKERFPKTPVLALTATATREVIEDIGKQLRMRAPALFRGSFLRPNLKLIAVRK
                     DTLGRVSTRDAIVALLRERRGESGIVYCLSRRSTEELAEYLRSAGISARHYHAGLEPA
                     ERSAAQDAFRKGEVDVVTATIAFGMGIDKSNVRFVVHRDLPRSIEGYYQEIGRAGRDG
                     LASDCILFYSWADVKAYDRMADQSGDEAAAERLRGQARDMFRLAEADGCRHAHVVRYF
                     GEKIAPCIESCDQCTGEAVADALKHVARGRRKAERVENGEEPLRKAAPVVPPGSEELL
                     GELKALRSRLANERRVPAYVVFSDATLVAMAARRPASHAELLTISGVGTTKLERYGDV
                     FLSAIARHGA"
     gene            complement(3573..4001)
                     /locus_tag="VLJ38_10165"
     CDS             complement(3573..4001)
                     /locus_tag="VLJ38_10165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU39926.1"
                     /translation="MPRLTPPSHQRMPRRLLRQRCQVVRERDFKLIADRVVDVSASGA
                     LVMPADPVLTGERVILSFQLPHSLYWVDAEAWVTRVLHGRRPGEHTRGVALELDGMSG
                     LSRFMLERALRHLPPAPPRYRSGRRANPNLISGLVGAPSV"
     gene            4157..5521
                     /locus_tag="VLJ38_10170"
     CDS             4157..5521
                     /locus_tag="VLJ38_10170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39927.1"
                     /translation="MTRPLFAALLLGFTAAGFLDTGLAAAGTPAAVFRPTLVLGTAEP
                     VPNGVKVGAAGAEWALPGGARLTAERDAELRVIAVPQQLDLGGRRRVASYTVMLKSGI
                     VRARVPANGSTAVVVSAPRKTSVLVAGGEASIAAGSQIAVANAEGATSVSVNGSPFHA
                     VEAGMVEVPGGPKRPLLQTPSLAGAPSVLLSYGKPAELDAFRWEPVAGARAYRLEIRD
                     SVSKRVVARSEMATTASPLGFATLEPGNYSVRIAAVDSAGIESAHPIERPLCVLGVSL
                     PPGALVDAAGIVRFPPGASIGFDHAAGVEMSFGQSGVFTPAPPSLGLFRAQPFLLRLR
                     AAGTDAPRDLWLMPRTLRAKIAFGQRAPHWPGEPLEIDVQVEDSAGTDALEVEPAVSV
                     GVEPVAVEFTRRGSRWHGVLAPRAGNGPWVVRVEVKDRSGITLGRDFVEVAGAAPNPS
                     GGGT"
     gene            5518..5937
                     /locus_tag="VLJ38_10175"
     CDS             5518..5937
                     /locus_tag="VLJ38_10175"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU39928.1"
                     /translation="MSTAGRAAPAEQQGTARARRVATRTNERRDRVRCEVHLDIDVQS
                     SAARSSAVTRDLSVAGAFIVTDLELPIGGMLELKLHLPRLAEPLCCVGEVRWSRPQGC
                     ESGDPAGVGVRFVAPDTEVRRAIQSFLLEQAPLDVDE"
     gene            complement(5991..>6568)
                     /locus_tag="VLJ38_10180"
     CDS             complement(5991..>6568)
                     /locus_tag="VLJ38_10180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39929.1"
                     /translation="DEPKKDEPTSAEAKKDEAKAEAKSDTKPADSTTPPEVKRTAKDI
                     ITAPEVTFMFNFNDSEPKERAEKACNSEAGDDAKKMALCMKKASGKFEADGMQFKKDN
                     KGQWVWVTIRRKGSTVTVLHNVPIEFGDDKPTSVVIKPIGKDTGKQPSKQPSEVVVEV
                     PNEFEIALKDPTHGRMVYEAKIGIMSDDKAK"
BASE COUNT          965 a         2272 c         2277 g         1054 t
ORIGIN      
        1 aaattccggc gtcgcgtgca gcgcatcaca ggcgaccttc cggacggccg cataagggtc
       61 gtcgaggagc tcggccaggg cccgtgcttg ccacacgctg ttcgtcgcgg cgcgtgcctc
      121 ggcgcgaccg aacgcggccg ccacgacgac acgcgtcgcc gcatcaccgg acaagagctc
      181 gacgagcgcg cgcgggggct cgtcatcgac cggcgccggt tcggcgctgc caagcgacgg
      241 cgcacgcgtg ccgtaccaag cgtcgagcgt ccgcgccgtc cagccgagcg tgcggtcgag
      301 gtgacagaga ttgcacgcat tcgggcgccc gtccctggcc gtcgcgctgg cgctcggcgt
      361 gtcgatgcga tgcgagcgaa tcgcgctgaa cagcgcgtac gaagtgaacg gcatgtggca
      421 gccgacgcag gagctgcccg cggaccctgc agcgtgatgc gtgtgctcgg tgccgcgacg
      481 cgcctcggcc gcgtgacagc gcccgcacgc cacgtccacc ggctcagcgc gccgcagctg
      541 atcgttcggc tcactcgcat gcatggaatg gcaggacaag cacgctatct gccgcttgcc
      601 gtggccgcgc gcgtagcagg ccgagcgctc gagtccgttg agctcgcggc cgcccacgcg
      661 aatcgtgccg tcgccccaga acaggctttc ggtcgtcgct tctacggaag cgccgctcac
      721 gcccggcgcg gctgaagcag gcgctgcgcg gtcgggcgag ccggctgctg ctggcgccag
      781 caggacgcgt gtgggagcga gagcgtcacc gggcgagtag tcgctgaacc cggtttgcca
      841 gaagcgatct tcagcgcgcg ggacgaaata agcgtgacac tggccgcaca cggcggaggc
      901 gcgctcggcc gaaaggcggg cgggattgac gatgcttgcg tcggcgtcgt cgcggaggtg
      961 cgtcaggagc ctagcgaggg gagcgcgctg tttctcgacg tgcgcgccgc ccgggccgtg
     1021 acaggcctcg caggcgatgc cgagctcgac ggcgtcggat gcgaagacgt cgcgctgctc
     1081 gtcgagcgcg ggctcaccgc gcgtcgcgtg gcacatgatg cagttcgagt tccagcggat
     1141 ggcgtgcggc ggggcgtcgg gcggctgcaa gaacgcgtcg cggcgcggca cgtagcgttt
     1201 ctcggcaatc aggtaagtga tgggcaacag tcggagctcg ttgccgcgct cgcctcccac
     1261 ccaataaacc tgctgatgat gcgagccggt cgcgagcaaa acgcgccgct cgactagcgg
     1321 cgccgcggcg ctcggtgtcg ggctgtgcgc gcgaatcgac gccgccacca gatccggatc
     1381 gggcaaacga gcccagagct cgccgccctt gcgcgaaagc tcgacgttgc ggccttccac
     1441 ctcgagcttt acgccctgcc aggggccgag caccgtcgca ggcgtcgcga cttgcgtcat
     1501 cgtgcgatga aagctccgct cccaactcgc gaattgggac ggatggcaag cgcggcaggc
     1561 gccggatccg acggcgtgag cacgctctcg cacgacggcg atggggctca ccggagcggc
     1621 ctcgcgcgcg ccgcggacga gcgaagccac cagcgcgcca gcaagaccca gcgccgtcaa
     1681 cgcgcgcagc cgcgcgtctc ccgtacgcca gacgagccac gccgcggcga cggcgagcgc
     1741 gacatacgaa gccacttcga gacccgccat gcggcccggc gaggataatg ccgcttgcgg
     1801 caaccgtggg gatcggtcat ggggcgagcg tgacggatag cgagctccct gcccgagtcg
     1861 aacgacttcg ggagcgtgtg ctcaccgccc ccgccgaaga acgccccggc ctcgccgagg
     1921 agctcgaggc cctacgcggc ctctatcgaa gcaactcgag cgcgttcacg gccgaactgg
     1981 tcggtatgct acgtggaatc gccgccgacc tcgattcggc tccgccaggt gaagctctcg
     2041 cgcgcgagct caaatcgacc tttggtttcg atgagttccg gcccggccag ctcgccatcg
     2101 tgcgcacggt cctcgccggc cgcgactgca tcggcgtgat gccgaccggc gccggcaaat
     2161 cgctcaccta ccagctgccg gcgcgcctgc tcggcggcgt gaccctcgtg gtctcgccgc
     2221 tcatcgcgct catgaaggac caggtggacg ccttggccga ggtggggctc cgctcgacgt
     2281 tcttgaactc gagcctgtcg gccgacgaac gccgggaacg cgtcgcgcgc atccgctcgg
     2341 gcgaaatcga aatcgtctac gccgcgcccg agggcctcga ggcctccgtc ggtcgtgtca
     2401 tcgccgacct cgacctgcgc ctgatcgccg tcgatgaagc gcattgcatc agtcagtggg
     2461 ggcacgattt tcgtcccgct taccgcaacc tcgccggctt caaggagcga tttcccaaga
     2521 cgcccgtgct cgcgctcacg gcgacggcca cgcgcgaggt catcgaggac atcggcaagc
     2581 agctccgcat gcgcgcgccc gcgctcttcc gcggctcgtt cttgcgcccc aacctgaagc
     2641 tcatcgccgt ccgtaaggac acgctcggtc gcgtctcgac gcgcgacgcc atcgtggcgc
     2701 tcttgcgcga gcgccgtggc gagagcggca tcgtctattg cttgtcgcgc cgttcgaccg
     2761 aggagctcgc ggagtacctg cgttccgcgg gcatttccgc gcgtcattac cacgccggac
     2821 tcgagccggc cgagcgctcc gccgcgcaag acgcgtttcg caagggtgaa gtcgacgtgg
     2881 tcacggccac gatcgcgttc ggcatgggca tcgacaagtc gaacgtgcgc ttcgtcgtgc
     2941 atcgcgacct gccgcgttcg atcgaaggct attaccaaga gatcggacgc gcgggtcgtg
     3001 acgggctcgc gagcgattgc atcctgtttt actcgtgggc cgacgtgaag gcctacgacc
     3061 gcatggccga tcagagcggt gacgaggccg ccgcggagcg tctgcgcggt caagcgcgcg
     3121 acatgttccg tctcgcggag gcggatggct gccggcacgc gcacgtcgtg cgctacttcg
     3181 gggaaaagat cgcaccctgc atcgagagct gtgatcaatg cacgggggaa gccgtggcgg
     3241 acgcgctcaa gcacgtcgcg cgcgggcggc gcaaggccga acgggtcgaa aacggcgagg
     3301 aacccttgcg caaagcagcg ccggtcgtgc cgcccggctc ggaggagctg ctcggcgagc
     3361 tcaaggcgct acgcagccgg ctcgcgaacg aacggcgtgt cccggcgtac gtcgtcttca
     3421 gtgacgcgac gctcgtggcg atggcggcgc gccgtccagc gtcgcacgcg gagctgctca
     3481 cgatctcggg cgtcggcacg accaagctcg agcgctacgg cgacgtcttc ctgtccgcca
     3541 tcgcgcggca cggcgcctga acgtcgcgcg agtcagacgc tcggcgcgcc caccaacccg
     3601 gagatcaaat tcggattggc acggcgcccg gagcgatagc gcgggggagc gggcggcaag
     3661 tgacgcaggg ctcgctcgag catgaagcga ctgagtcccg acatgccgtc gagctcgagc
     3721 gccactcctc gcgtgtgctc acccggacgg cggccgtgaa gcacgcgcgt gacccacgcc
     3781 tcggcgtcga cccaatacag cgaatgcggc agttggaagg acaggatgac gcgctcgccc
     3841 gtgagcaccg gatcggcggg catcacgagc gcccccgacg ccgacacgtc gacgacccga
     3901 tcggcgatga gcttgaaatc gcgttcgcgg acgacttggc aacgttggcg gagtagccgg
     3961 cgcggcatgc gctgatggga cgggggggtc aatcgaggca tcgggactcc ttgcttcagc
     4021 gaaatcgtaa ggtgagggga gtcgcgtggg ccaagttcgc gcgccatcgc acacggacgc
     4081 agggctaccc agcaattcgt gaggtagccc tgcgggcgat ctcaagtcgg gtcactgttg
     4141 gtccgtttag gcgttggtga ctcgtccgct cttcgctgca ctgctcctgg gtttcaccgc
     4201 tgctggtttc ctcgacactg gattggctgc ggcgggcacg ccggcggccg tgtttcgccc
     4261 gacactcgtg ctcggcacgg cggagcccgt gccgaatggc gtcaaggtag gcgcggcggg
     4321 ggccgagtgg gcactgccgg gcggggcgcg gctcaccgcc gaacgtgacg cggagctgcg
     4381 cgtcatcgcc gtgccgcaac agctcgatct cggcgggcgt cgccgcgtcg ccagttacac
     4441 cgtgatgctc aagtccggca tcgtgcgcgc gcgcgtcccg gccaacggct cgacggcggt
     4501 cgtcgtctcg gcgccccgca agacgtccgt gctcgttgcc ggcggcgaag ccagcattgc
     4561 cgcggggtcc cagatcgcag tcgcgaacgc cgaaggtgcg acctccgtct cggtcaacgg
     4621 ctcgccgttc cacgcggtcg aggccggcat ggtcgaagtg ccgggcggcc cgaagaggcc
     4681 cctcctgcag acgccgtccc tcgcgggcgc gccgtcggtt ctgctctcgt acggcaagcc
     4741 ggccgagctc gacgccttcc gctgggagcc ggtcgccggc gcgcgcgcct atcgcctcga
     4801 gatccgcgac agcgtgagca agcgagtcgt cgcccgctcc gaaatggcga cgaccgcctc
     4861 gccgctcggg ttcgcgacgc tcgagcccgg caattattcg gtccgcattg ccgcggtcga
     4921 tagcgcgggc atcgaaagcg cgcacccgat cgagcgcccg ctgtgcgtcc tcggcgtcag
     4981 cctgccgccc ggagccctgg tcgatgcggc cggcatcgtg cgcttcccgc ccggcgcgag
     5041 catcggcttc gatcacgccg cgggcgtcga gatgagcttc ggacagagcg gcgtatttac
     5101 tcctgcgccg ccgtcgctcg ggctcttccg cgctcaaccg tttctgctgc gtttgcgcgc
     5161 cgcgggtaca gacgctcctc gcgatctctg gctcatgccg cgcacgctgc gcgccaagat
     5221 cgccttcggg cagcgcgcgc cgcactggcc cggcgagccg ctcgagatcg acgttcaggt
     5281 ggaggactcc gccggcactg acgcgctcga ggtagaaccc gccgtgagcg tcggcgtcga
     5341 gccggtcgcc gtggaattca cgcgtcgcgg gtcgcgctgg cacggcgtgc tcgcgccgcg
     5401 cgctgggaac ggaccctggg tcgtgcgcgt cgaagtcaaa gatcgcagcg gcatcacgct
     5461 cggtcgcgac ttcgtcgaag ttgcgggcgc cgcccccaac ccgtcgggtg gaggcacgtg
     5521 agcaccgccg ggcgcgccgc gcccgccgag cagcagggaa cggcgcgcgc acgccgcgtc
     5581 gcgactcgca cgaacgagcg ccgcgaccgc gtgcgttgcg aggtgcacct cgacatcgac
     5641 gtgcagagca gcgcggcacg ctcttcagcc gtcacgcgtg atctttccgt ggcgggcgcc
     5701 ttcatcgtga cggacctcga gctgccgatt ggtggcatgc tggagctcaa gctacatttg
     5761 ccgcggctcg ccgagccgct gtgttgcgtg ggcgaggtgc gctggtcgcg cccgcagggc
     5821 tgtgagtccg gcgaccccgc gggcgtgggc gtccgtttcg tcgcgcccga cacggaagtt
     5881 cgccgcgcga ttcagtcgtt cctgctcgag caagcgccgc tcgacgtgga cgagtgaagg
     5941 gcagggtggc gtgaacggtg gcggctgcgc ctgaacggtg aagcggcggg ctatttcgcc
     6001 ttgtcgtcgc tcatgatgcc gatcttcgct tcgtagacca tccgcccgtg cgtcgggtcc
     6061 ttgagcgcga tctcgaactc gttcggaacc tcgaccacga cctcactcgg ctgcttgctc
     6121 ggctgcttcc ccgtatcctt gccgatcggc ttgatcacga cggaggtcgg cttgtcgtcg
     6181 ccgaactcga tcggcacgtt gtgcagcacc gtcacggtcg agcccttgcg gcggatcgtc
     6241 acccaaaccc actggccctt gttgtccttc ttgaactgca tcccgtcggc ttcgaacttg
     6301 ccgctcgcct tcttcatgca gagcgccatc ttcttcgcgt cgtcgccggc ttccgagtta
     6361 caggccttct cggccctttc cttcggctcc gaatcgttga agttgaacat gaacgtcact
     6421 tcgggcgccg tgatgatgtc cttcgccgtg cgcttgacct cgggcggcgt ggtcgagtcg
     6481 gccggcttcg tgtccgactt cgcctcggct ttcgcctcgt ccttcttggc ctcggccgag
     6541 gtcggctcgt ccttcttcgg ctcgtcgg
//
LOCUS       DATIML010000591         2527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1855349, whole genome shotgun sequence.
ACCESSION   DATIML010000591 DATIML010000000
VERSION     DATIML010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1855349"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VLJ38_10185"
     CDS             complement(<1..650)
                     /locus_tag="VLJ38_10185"
                     /inference="COORDINATES: protein motif:HMM:NF024773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HSU39930.1"
                     /translation="MASRTHLERLFAPESVAVVGASSSPDKAGHQALLALASFGGDVF
                     PVNPRATEIAGRRAFPSLGALGRPVDLVLLAVPAAACVEAVREAVACGCGGGLILGGG
                     FAESGPAGAALQAELHALCAQSGFRVLGPNTAGFVNKEVSLTASFLPAADRICSGPVA
                     VIAQSAGMNLTVSFLLEQLGSGVSLAVGLGNAMNVDAADVLEFVANRPTTKSIALHL"
     gene            complement(656..>2527)
                     /locus_tag="VLJ38_10190"
     CDS             complement(656..>2527)
                     /locus_tag="VLJ38_10190"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HSU39931.1"
                     /translation="EIAVVVLYCEGRTFIAGADIGELGNEPLRPDVPDVVEFVAAAEK
                     PVVVAMHGTALGGGLELALGCHFRLATGNAKLGFPEVNLGILPGAGGTQRLPRLVGVR
                     RALELVVGGAPITAAQALEWGLIDAIIDGDVRTAALAFAERLLREGTAVRRASSLTAR
                     LEDPGLFEEYEARIRERQRGFIAPERCLQAIRAAVELPFEQGIELERALFRELVASAQ
                     SKAQRHVFFAEREVSRLPGLSDGGAALREVKRVAVIGAGTLGTDIAACFADARIAVTI
                     VDPSGERGLAGEETKNADLLVEAVGEDVGLKREIFAMLDKVCKPGAMLATTTSSLDID
                     RLAEGTERAGDVVGMHFGTPVRAVKLLEIARARRTTPDVWASALKVGKVLGKISVPVI
                     AHPGLAADRMLAQELREAFFLLEEGALPAQVDRVLRDFGFPLGPFAAIDAAGLESVWQ
                     YREQNYGRMTARERSCDLLEKVYALGRLGRQTHAGFHRYGPDGEQAPDPAIEELVVNH
                     SQSRGIARRSVTDAEILERCLYAIINEGANVLAEGVVARALDIDLVWIHGYGFPIYRG
                     GPLFHADEIGLPDVHRTLVALQARLGAEYWAPAPLIERLIREAKGFYGSAPSAPAAA"
BASE COUNT          440 a          902 c          832 g          353 t
ORIGIN      
        1 aggtgcaaag caatcgattt cgtggtgggt cgattggcga cgaactcgag cacgtcggcg
       61 gcgtcgacgt tcatggcgtt gccgaggcca accgccagcg agacgccgga gccgagctgc
      121 tccaggagaa agctcaccgt cagattcatg ccggcgctct gcgcgatgac agcgacgggc
      181 cccgagcaaa tacggtccgc agcgggcagg aagctcgcgg tgagcgacac ctccttgttg
      241 acgaatcccg cggtgttcgg gccgagcacg cgaaaccccg actgagcgca cagcgcgtgc
      301 agctccgcct gcagcgcggc accggccggt cccgactcgg caaagccacc gcccaagatc
      361 aacccgccgc cacaaccgca tgcgacggct tcgcgcaccg cctcgacgca ggcggcggcc
      421 ggcacggcga gcagcacgag atccacgggg cggccgagcg cgccgagcga cgggaacgcg
      481 cgacgcccag cgatctccgt ggcacgcgga ttgacgggga aaacgtcacc accgaaactc
      541 gcgagcgcga gcaaggcctg atgaccggcc ttgtccgggg agctagacgc gcccaccacg
      601 gccacggact ctggcgcgaa gaggcgttcc aagtgcgtgc gcgacgccat ggcgctcacg
      661 cggctgccgg cgcgctcgga gcgctaccgt aaaagccctt tgcttcccgg atcaagcgtt
      721 cgatgagcgg ggccggcgcc cagtactccg cgccgagtcg cgcctgcaag gcgacgagcg
      781 ttcgatgcac gtccggcagc ccgatttcgt cggcgtggaa cagcggacca ccgcgataaa
      841 tcggaaagcc gtagccgtgg atccagacca gatcgatgtc gagcgcgcgg gcgacgacgc
      901 cttcggccaa gacgttcgcg ccttcgttga tgatcgcgta gagacaacgc tcgaggatct
      961 ctgcgtcggt cacgctgcgc cgcgcgatgc cgcgcgactg ggagtgattg acgaccagct
     1021 cttcgatcgc gggatcgggc gcctgctcac cgtccgggcc gtagcggtgg aagccggcgt
     1081 gcgtctgccg gccgagccga ccgagcgcgt acactttttc gagcaagtcg caggagcgct
     1141 cgcgtgcggt catgcgcccg tagttctgct cccggtactg ccagacgctc tcgagcccgg
     1201 cggcgtcaat cgcggcgaac gggcccaacg gaaagccgaa gtcacggagc actcgatcca
     1261 cctgggccgg caaagccccc tcttccagta gaaaaaaggc ctcgcgcagc tcttgcgcga
     1321 gcatgcgatc ggctgccaag ccaggatgcg caatcacggg cacactgatc ttgccgagca
     1381 ccttgccgac tttgagcgcg ctcgcccaga cgtcgggcgt cgtccggcgc gccctcgcaa
     1441 tttcgaggag cttcaccgcg cgcacgggag tcccgaaatg catgccgacc acgtcaccgg
     1501 cgcgctccgt gccctcggcg agccgatcga tgtccaatga cgaggtggtg gtcgcgagca
     1561 tggcgcccgg cttgcagacc ttgtcgagca tcgcgaaaat ctcgcgcttg aggcccacgt
     1621 cttcgccgac ggcctcgacg agcagatccg cgttcttcgt ttcctcacca gcgagcccac
     1681 gctcgcccga cgggtcgacg atcgtcaccg cgatgcgcgc gtcggcgaag caggcggcga
     1741 tatcggttcc cagagtgccc gcgccgatga cggccacgcg cttcacctcc cgcagcgccg
     1801 cgccgccgtc ggacagaccc ggaagcctcg aaacctcacg ctcggcgaag aacacgtggc
     1861 gctgcgcttt cgactgcgcg gacgcgacga gctcgcggaa gagcgcccgt tcgagctcga
     1921 tgccctgttc gaacggcagc tcgactgccg cgcgaatcgc ttgcaagcag cgctcaggtg
     1981 cgatgaaacc gcgctgccgc tcgcggatcc gagcttcgta ctcttcgaac agcccggggt
     2041 cttcgagccg agccgtgagc gagctcgctc ggcgcacggc agtcccctcg cggagcaggc
     2101 gctcggcgaa cgcgagcgcc gccgtcctca cgtccccgtc gatgatggcg tcgatcagcc
     2161 cccactcgag cgcctgcgcc gcggtgatgg gggcgccgcc cacgacgagc tcgagcgcgc
     2221 gccgcacgcc cacgagccgc ggcagtcgtt gcgtgccgcc cgcgcccggc aagatcccga
     2281 ggtttacttc cggaaagccg agcttcgcgt tccccgtcgc gagacgaaag tgacaaccga
     2341 gcgcgagctc gagcccaccg ccgagcgcgg tgccgtgcat cgcgacgacc accggctttt
     2401 ccgccgcagc gacgaattcg actacgtcgg gaacgtccgg ccgcagcggc tcgttgccga
     2461 gctcgccgat atccgcgccc gcgatgaacg tgcgcccctc gcagtaaagg acgaccacgg
     2521 cgatctc
//
LOCUS       DATIML010000592         1512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3871793, whole genome shotgun sequence.
ACCESSION   DATIML010000592 DATIML010000000
VERSION     DATIML010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3871793"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1512
                     /locus_tag="VLJ38_10195"
     CDS             <1..>1512
                     /locus_tag="VLJ38_10195"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39932.1"
                     /translation="LVGERQIPDHPLVNQTVTDATTEAMDEAGFIALLRQIESGKLRL
                     VARDLTEPSPFAASILTAKPYSFLDDAPLEERRTQAVLSRRWIDPAQAKDLGALDPEA
                     IARVSHDAWPDPRDPDELVDALGVLGFMTEVEGKRDALEAHFAALSAGRRATRLDTAG
                     GLWVATDRLAELTAIHPDARLDPPLPPLAPRGAEPWTFETALKEILRSRLEAVGPVTT
                     AELARSLAVSDDAVVVALAALEAEGVVFRGSFRPGGQAEWCERRLLARIHRATIDRLR
                     SEIEPVTQQDFLRFLLNFQRALPSTKLAGPTGVAAALEILEGFEAPASAWESDLLPSR
                     LEEYDAAWLDGLCLAGQTSWLRRTPSGSGATPVRATPITLVPRDAVGRWRALGAGSAN
                     VTPLSADAEAVRVVLEARGASFFDDLVRASGLVRTQVEIALGELVSRGLVSSDGFNGL
                     RALLVPAKLRTRQEYGRRQRAPIYALAGAGRWSLFDAPGAELAPPSDDDVEAVA"
BASE COUNT          209 a          575 c          504 g          224 t
ORIGIN      
        1 ctcgtgggcg agcggcaaat tcccgatcat ccgctcgtca atcagacggt caccgacgcg
       61 accacggaag cgatggacga agccggcttc atcgcgctcc tgcgccagat cgagtccggc
      121 aagcttcgcc tggtcgcgcg cgatctcacc gagccgtcgc cgttcgccgc gagcatcctc
      181 accgccaagc cgtactcctt cctcgacgac gctccgctcg aggagcgccg cacgcaagcc
      241 gtgctgagcc ggcgctggat cgatcccgca caggccaagg atctcggcgc gctcgatccg
      301 gaagccatcg cgcgcgtcag ccacgacgcc tggcccgatc cgcgcgatcc cgacgagctc
      361 gttgatgcgc tcggtgtgct cggcttcatg acggaagtcg agggcaagcg tgacgcgctc
      421 gaggcgcact tcgccgcgct cagcgccggc cggcgcgcga cgcggctcga cacggcgggc
      481 ggactctggg tcgcgaccga tcgcctcgcg gagctcacgg caattcaccc cgacgcgcgc
      541 ctcgacccac cgctgcctcc gctcgcgccg cgcggcgccg aaccctggac cttcgagacc
      601 gcactcaaag aaatcctgcg ttctcggctc gaagccgtgg gccccgtcac gaccgcggag
      661 ctcgcgcgct cgctcgccgt gagcgacgac gcggtcgtgg tcgctctcgc cgcgctcgaa
      721 gccgaaggcg tcgtgttccg cggctctttc cgtcccggcg gacaagccga atggtgcgag
      781 cggcgcctgc tcgcgcgcat ccaccgtgcc accatcgatc ggctgcgttc cgagatcgag
      841 ccggtcacac agcaagactt cttgcgtttc ctgctcaact ttcagcgcgc cctgccgagc
      901 acgaaactcg ccggccccac gggcgtggcc gccgcgctcg agatcctcga gggcttcgaa
      961 gcgcccgcga gcgcctggga gtccgatctg ctgccgtcgc ggctcgaaga gtacgacgcc
     1021 gcctggctcg acgggttgtg tctcgccgga cagacgagtt ggctccgccg cacgccgagc
     1081 ggctcggggg cgacgcccgt gcgcgcgacg cccatcacgc tcgtgccgcg cgacgcggtc
     1141 ggccgctggc gcgccctcgg cgccgggagc gcgaacgtga cgccgctctc cgcggatgcc
     1201 gaagccgtgc gtgtcgtact cgaagcgcgc ggggcgtcgt tcttcgacga cctcgtgcgg
     1261 gcgagcggac tcgtgcgcac gcaagtcgaa atcgcgctcg gcgagctggt ttcgcgcggt
     1321 ctcgtgagct ccgacgggtt caacggcctg cgcgctttgc tcgtccccgc caagctccgc
     1381 acgcgccagg aatacggtcg ccgccagcgc gcgccgattt acgcgctcgc cggcgcggga
     1441 cgctggtcgc tcttcgacgc gcccggcgcg gagctcgctc cgccgagtga cgacgacgtc
     1501 gaagccgtcg cc
//
LOCUS       DATIML010000593         2850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4161675, whole genome shotgun sequence.
ACCESSION   DATIML010000593 DATIML010000000
VERSION     DATIML010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2850
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4161675"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VLJ38_10200"
     CDS             <1..682
                     /locus_tag="VLJ38_10200"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU39933.1"
                     /translation="TGPVGPLCKEDAAGRGSLHSVLARVGPSLMLGLAMEDFVDPVPE
                     TTPAIAAALVANHREFLSFVERRVGSRALAEEILQDAFVRSMTRGEEIRESAVGWFYR
                     VLKHAVIDQQRRGASADRRLEAFAAELATQSEPDAALARVACECVGRLAAGLKAEYAD
                     ALQRIDVEGIAVKDYAASAGISSGNAGVRIFRARAALRRELARSCGTCAEHGCLDCSC
                     GTTHGGCG"
     gene            751..1368
                     /locus_tag="VLJ38_10205"
     CDS             751..1368
                     /locus_tag="VLJ38_10205"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HSU39934.1"
                     /translation="MNLLILGATGRSGREVVRIALARGHHVTAYVRSPNKLGPERASL
                     RVEQGDALDTERLSAALVGQDAVVSALGLPAKLALRPSNFMAEAAATTVAAMKRAGVG
                     RLAIVSAAVLFPQKGLLYAFFRWFLRYHARDLSAMETVVRATDLDWTIARPPRLVAAE
                     DEQLRIVEGALPDKSYKLSFRALASFLVECVEHARYGGRVVGLAR"
     gene            1328..2356
                     /locus_tag="VLJ38_10210"
     CDS             1328..2356
                     /locus_tag="VLJ38_10210"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU39935.1"
                     /translation="MRATAVESWGLPAELALYAIRVGPHEVRVSGTETDRTTDAARLA
                     AFQAQRSTLVALAYRMLGDVGRAEDMVQEAWVRWQSAEGLIESPRAYLVTTVTRLCLN
                     ELDSAPRRREESRSDRLPEPVELGVLDPAREELERWQDVEMAFLVVLQRLTPSERAVF
                     LLHDAFDFDHREIAELVGRSEPACRKLLERARRDLRDGRRMLAASSDEHRRLLRAFVA
                     AARAGDTAALLALLADEAVLVSDGGPEGRALAGVRNLKKPLHGASHVAQFVVATTSRA
                     LSLFELEERELNGGPALVFYRDGAPTAALLLGIAGGKIERVFFHADSTRLGHVGERTD
                     PVTSARPP"
     gene            complement(2334..>2850)
                     /locus_tag="VLJ38_10215"
     CDS             complement(2334..>2850)
                     /locus_tag="VLJ38_10215"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HSU39936.1"
                     /translation="QNPDFARALADQPGSAAFTLPDILTAAVMGRPTRRLTLGLDMNV
                     VLWSTYDRIPIDFATAPDRTLAPKGENTYTVRGGVDFLTPLAGLHARGGLIFDHGAIP
                     SSGVGPALPDSNRIDVTMGLGYGQHAWNVDLGYMIVKFLPKDATGGVESPEGTYHTLA
                     YLLGLTVGVHL"
BASE COUNT          428 a          960 c         1000 g          462 t
ORIGIN      
        1 tacgggccca gtcgggccgc tctgcaaaga agacgcagcg gggcgcggtt cattacactc
       61 cgtactggcg cgggtcggcc cgagccttat gctgggcctc gcgatggagg acttcgtcga
      121 ccccgtgccc gagaccacgc cggccatcgc ggcggcgctg gtcgcgaacc accgagaatt
      181 tttgagtttc gtcgaacggc gcgtcggcag ccgcgcgctc gccgaggaga tcctgcagga
      241 cgccttcgtg cggagcatga cgcgcgggga agagattcgg gaatcggcgg tcggttggtt
      301 ttatcgcgtg ctcaagcacg ccgtcatcga tcagcagcgg cgcggagcgt ccgcggaccg
      361 ccggctcgag gccttcgccg cggagcttgc cacccagagc gagcccgacg cggcgctcgc
      421 gcgcgtcgcg tgcgaatgcg tggggcggct cgccgccgga ctcaaagccg agtatgcgga
      481 cgcgctccag cgcatcgacg tcgagggaat cgccgtgaag gactacgccg cgagcgccgg
      541 catctcgagc ggcaacgccg gcgtccggat ctttcgcgcc cgtgcggccc tccgccgcga
      601 actggcgcgc tcgtgcggta cctgcgccga acacggctgc ctcgactgtt cgtgcggcac
      661 gacgcacggc ggctgcggct gaagccgggg atccactcgc gacgcgttgc gtcaaagtca
      721 cgagttgccg ccttatacgg tctagctggg atgaacctgc tcattctagg cgcgaccggc
      781 cgaagcggcc gcgaagtcgt gcgtatcgcc ctggcgcggg gtcaccatgt gaccgcgtac
      841 gtccgctctc cgaacaagct cggtcccgag cgcgcctcgc tgcgcgtcga acagggcgac
      901 gcgctcgaca cagagcgcct gtccgcggcg ctcgtcgggc aagacgccgt cgtgtcggcg
      961 ctcggattgc ccgcgaagct cgcgctccgg ccgagtaact tcatggccga agcggcggcg
     1021 acgaccgtgg cggcgatgaa gcgcgccggc gttgggcggc tcgcgatcgt ctcggcggcc
     1081 gtgctgtttc cgcaaaaggg acttctttat gccttttttc gctggtttct gcggtaccac
     1141 gcgcgtgatc tcagcgcgat ggagacggtc gtgcgcgcga ccgatctcga ctggaccatt
     1201 gcgagaccgc cgcgattggt cgccgccgag gacgagcagc tgcgcatcgt cgagggcgcg
     1261 ctcccggaca agagttacaa gctctccttt cgcgcgctcg cgtcgttcct cgtcgagtgc
     1321 gtcgagcatg cgcgctacgg cggtcgagtc gtggggcttg cccgctgagc tcgcccttta
     1381 cgccattcgc gtcgggcccc atgaagtgcg cgtgagcggc accgaaacgg atcgcaccac
     1441 cgacgctgcg cgtctcgcgg cgttccaagc gcagcgctcg acgctcgtcg cgctcgccta
     1501 tcgcatgctg ggcgacgtcg ggcgggccga ggacatggtg caggaagcgt gggtgcgctg
     1561 gcagagcgcc gaagggctca tcgaatcgcc gcgcgcgtac ttggtcacca ccgtgacgcg
     1621 cctgtgcttg aacgagctcg atagcgcgcc ccgccgacgg gaagagagtc gcagcgatcg
     1681 cttgcccgag ccggtcgaac tcggcgtgct cgatcccgcg cgcgaggagc tcgagcgttg
     1741 gcaagacgtg gaaatggcgt ttctcgtcgt gctgcagcgg ctcacgccga gcgagcgcgc
     1801 cgtgttcctg ctgcacgacg cgttcgattt cgaccatcgc gagatcgccg agctcgtcgg
     1861 acgcagtgag ccggcgtgcc gcaagttgct cgaacgtgct cgccgtgacc tccgcgacgg
     1921 ccgccgcatg ctcgcagctt ccagcgacga gcatcgccgg ctgctccgag cgttcgtcgc
     1981 cgccgcgagg gcgggcgaca ctgccgctct gctcgcgttg ctggcggacg aggccgtgct
     2041 cgtgagcgac ggcgggccgg aagggcgcgc gctcgcgggc gtccgaaatc tcaaaaagcc
     2101 cctgcacggc gctagccacg tcgcgcaatt cgtcgtcgcc acgacgagcc gcgcgctgtc
     2161 gctattcgag ctcgaggagc gcgagctcaa cggtggcccc gctctcgttt tctatcgcga
     2221 cggcgcaccc acggccgccc tcctgctcgg catcgctggc ggtaagatcg agcgcgtctt
     2281 cttccacgcc gattcgacgc gcctcggtca cgtcggcgag cgaaccgatc ccgtcacaag
     2341 tgcacgccca ccgtgagccc gagcaaataa gcgagcgtgt gatacgtgcc ctcggggctc
     2401 tcgacgccgc cggtcgcgtc cttgggcaga aacttgacga tcatgtagcc gagatcgacg
     2461 ttccacgcgt gctgcccgta gccgagcccc atcgtcacgt cgatgcgatt cgaatcgggc
     2521 agcgctgggc cgacgccgga agacgggatc gcgccgtgat cgaagatgag cccgccgcgc
     2581 gcgtgcaggc ctgcgagcgg cgtgagaaag tcgacgccgc cgcgcacggt gtacgtgttc
     2641 tcgcctttcg gcgcgagcgt gcgatccggg gccgtggcaa agtcgattgg gatgcgatcg
     2701 tacgtggacc agagcacgac gttcatgtcg aggccgagcg tgagccggcg cgtcgggcgg
     2761 cccatgacgg ccgcggtgag gatgtcgggc aacgtgaagg ccgcgctgcc tggctgatcg
     2821 gcgagcgcgc gcgcaaaatc cggattttga
//
LOCUS       DATIML010000594         3362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5032026, whole genome shotgun sequence.
ACCESSION   DATIML010000594 DATIML010000000
VERSION     DATIML010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5032026"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VLJ38_10220"
     CDS             <1..220
                     /locus_tag="VLJ38_10220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39937.1"
                     /translation="DFLAFSGSLTTSIGWENITLQNGPDGQHRNAFWSPDAKLYLKFE
                     LQPDLLFEPRAVSRYTRARPLTNVASAR"
     gene            complement(227..1750)
                     /gene="gndA"
                     /locus_tag="VLJ38_10225"
     CDS             complement(227..1750)
                     /gene="gndA"
                     /locus_tag="VLJ38_10225"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HSU39938.1"
                     /translation="MEASADIGLIGLAVMGQNLALNIADHGFKVAVYNRTTATMKDFV
                     AHHPSTPGGLLGCATTQDLVQAVKRPRKFIILVKAGPAVDAVVEELIASGVEHDDIVV
                     DCGNSLWTDTIRRERDYTARCKFFGSGVSGGEVGARFGPSLMPGGDPNSWQHLKPIWE
                     AVAAKVDEQTGKPIETGAPGKPVVGGVPCTAYLGPNGAGHYVKMVHNGIEYIDMQLIA
                     EAYTLLRDLCGMRADELGRVFARWNDGDLDSYLIQITADILGQRDPHDPNAFLVDRVL
                     DAAGQKGTGKWTSVNALDMGIPANAIAEAVFARCLSALKEERVAASSELTGPNTPPFA
                     GDRAALIDAVRDALYCSKICAYAQGFQLMREAQKEYSWQLDFGTIAAIFRGGCIIRAR
                     FLQKITDAYRRNPELVNLLLDPYFKEQITGAQGNWRQVIGLASAHGVPAPAFMSALAY
                     YDGYRSQHLPANLIQAQRDYFGAHTYERVDRPRGQFFHTDWPEPGRPEQPVRGSGGH"
     gene            1867..2886
                     /locus_tag="VLJ38_10230"
     CDS             1867..2886
                     /locus_tag="VLJ38_10230"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSU39939.1"
                     /translation="MPASPSDLPPSSRGGVIVVADDDRITRELLAGMLRARGHEVDTV
                     PDGQAAVERVARGGVHLVLLDVLMPRLGGLEACRLLKSMTTGAFLPVVLVTVKTDSQS
                     RVEGLKIGADDYVCKPFDESELMARVEAMLRIKRLHDHVADARQRLEQLSIHDDLTGL
                     YNYRHLQVRLGEEYKRAERHRESLACMAIDIDRLQLQNEAGGRAHGDRVLRHVADTIR
                     RTIRDGDVLARFGGDEFLMVLPGLHFSGAVSVAERVFRDLRERPLASDTSKPPPITLS
                     VGVALFPSRDVRTRDSLLRSADLALGMAKREGGARVCVYQQEGQIYTPLVGLAGDGSE
                     GRGQG"
     gene            2886..>3362
                     /locus_tag="VLJ38_10235"
     CDS             2886..>3362
                     /locus_tag="VLJ38_10235"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39940.1"
                     /translation="MEASIRPGELGGPSIEAAPPRVLVVDDEPGLRRALSRLLQASGI
                     NVRTADDGAMALDVLAEDSFDVALVDLMMPRMNGLELLQHIRKRHAGTQVVLMTAFGD
                     VETAVQAVRAGAHHFLTKPFRSNDEVVLAVTKAAEHRRLVDHAVMLERRLEQMQKFG"
BASE COUNT          534 a         1095 c         1137 g          596 t
ORIGIN      
        1 ggattttctg gcgttcagcg gctccctcac gacgtcgatc gggtgggaga acatcacgct
       61 acagaacgga ccggacgggc agcaccgcaa cgctttttgg agcccggacg cgaagctcta
      121 cctcaaattc gaactccagc cggacctctt gttcgagccg cgcgctgtgt ccaggtacac
      181 ccgtgcgcgc ccgctcacga acgtcgcgag cgcacgttga cttgtctcaa tgtccgcccg
      241 agccgcgcac gggttgctcg gggcggccgg gctcgggcca atcggtgtgg aagaactggc
      301 cgcgcgggcg atcgacgcgc tcgtaggtgt gcgcgccgaa gtagtcgcgc tgcgcttgga
      361 tcagattcgc gggcaagtgc tgactccgat agccgtcgta gtaggcgagg gcactcatga
      421 aggccggcgc cggaacgccg tgcgccgaag ccaggccgat gacttgccgc cagttgcctt
      481 gcgcgcccgt gatctgctct ttgaaatagg gatcgagcag gagattgacg agctcgggat
      541 tgcgccgata cgcgtccgtg atcttttgaa ggaagcgtgc gcggatgatg caacccccgc
      601 ggaagatcgc ggcgatcgtg ccgaaatcga gctgccacga gtactctttt tgcgcttcgc
      661 gcatgagctg gaagccctgg gcgtaggcgc agatcttcga gcagtagagc gcgtcgcgta
      721 cggcgtcgat cagcgctgcg cgatcgcccg cgaacggcgg ggtgttcggc cccgtgagct
      781 cgctgctcgc ggcgacgcgt tcttccttga gcgcgctcag gcagcgcgcg aagacggctt
      841 cggcgatggc gttggcgggg atgcccatgt cgagcgcgtt gacgctcgtc cacttaccgg
      901 tgcccttctg gcccgcggcg tcgagcacgc gatcgacgag gaacgcgttc ggatcgtggg
      961 ggtcgcgctg accgaggatg tcggccgtga tttgaatcaa gtacgagtcg agatcgccgt
     1021 cgttccagcg tgcgaacacg cgcccgagct cgtcggcgcg catgccgcag agatcgcgca
     1081 gcagcgtgta cgcctcggcg atgagctgca tgtcgatgta ctcgatgccg ttgtgcacca
     1141 ttttcacgta gtgcccggcg ccgttcgggc cgaggtacgc agtgcacgga acgccgccca
     1201 cgacgggttt gccgggcgcg ccggtctcga tgggtttccc cgtttgctcg tcgactttgg
     1261 ccgcgacggc ctcccagatc ggcttgaggt gctgccacga gttcggatcg ccgccaggca
     1321 tgagtgaggg accgaagcgc gcgccgacct cgccgccgga aacgcccgag ccgaagaact
     1381 tgcagcgcgc ggtgtaatcc ctctcgcgcc gaatggtgtc ggtccagagg ctgttgccac
     1441 agtcgaccac gatgtcgtcg tgctcgaccc cggaagcgat gagctcttcg accacggcat
     1501 cgactgccgg tccggctttg acgaggatga tgaatttgcg cggccgcttg acggcttgca
     1561 cgaggtcctg cgtggtcgcg caaccgagga gtccgcccgg cgtgctcgga tgatgtgcga
     1621 cgaagtcctt catcgtcgcc gtggtgcggt tgtagacggc gactttgaag ccgtggtcgg
     1681 cgatgttgag ggccaggttt tggcccatga cggcgagtcc gatgagtccg atgtccgcgc
     1741 ttgcttccat atcgccttac ctcgagcttc gcgccgttcc atagcatgaa cgccgtgcaa
     1801 ctcggccatt gcccttggaa agacgacgct cgccaaattc gagtcgaggc gaggtaagct
     1861 cgtttcgtgc cagcgtcgcc gagcgatctt ccgccatcct cgcgcggggg agtgatcgtc
     1921 gtcgcggacg acgatcgcat cacgcgcgag ctcttggccg gcatgctgcg cgcgcgcggt
     1981 cacgaagtcg acaccgtccc ggacggccag gcggcggtcg aacgcgtcgc gcgcggcggc
     2041 gtgcacctcg tgctgctcga cgtcctcatg ccacgactcg gcgggctcga ggcatgtcgc
     2101 ctcctcaaga gcatgacgac cggcgcattt ctgcccgtcg tgctcgtcac cgtgaagacc
     2161 gacagccaga gccgcgtcga ggggctcaag attggcgccg acgattacgt ctgcaagccg
     2221 ttcgacgaga gcgagctcat ggcgcgcgtc gaggccatgc tgcgcatcaa gcggctccac
     2281 gatcacgtcg ccgacgcgcg tcagcgcctc gagcagctca gcattcacga cgatctcact
     2341 gggctttaca actaccggca cctgcaagtg cgcctcggcg aggagtacaa gcgcgccgag
     2401 cgccaccgcg aatcgctcgc ctgcatggca atcgacatcg atcgtctgca gctgcaaaac
     2461 gaggccggcg ggcgagcgca cggcgaccgc gtcctccggc acgtcgccga caccattcgt
     2521 cgcaccatcc gtgacggcga cgtgctcgcg cgcttcggcg gcgatgaatt cttgatggtg
     2581 ctgcccggac tccacttctc gggcgcggtg tcggttgccg agcgcgtgtt ccgcgatctg
     2641 cgcgagcgcc cgctcgcctc ggacacgagc aagcccccac ccatcaccct ttcggttggc
     2701 gtcgcgctgt tcccgtctcg cgacgtccgt acgcgcgact ccttgctccg gtcggccgac
     2761 ctcgcgctcg gcatggccaa acgggaaggc ggcgcgcggg tttgcgtcta ccagcaggag
     2821 gggcaaattt atacgccgct cgtcggtctc gccggcgacg gctccgaagg acgaggccag
     2881 ggttgatgga ggcgagtatt cggcccggcg agctcggcgg accgagcatc gaagctgcgc
     2941 ccccgcgcgt gctcgtggtc gatgacgagc cggggctccg gcgcgcgctc tcacggctct
     3001 tgcaagcgag tggcatcaac gtgcgcaccg ccgacgacgg cgcgatggcg ctcgacgtgc
     3061 tcgccgagga ttcgttcgac gtggcgctcg tcgatttgat gatgccgcgc atgaacggcc
     3121 tcgagctctt gcagcacatc cgcaagcgcc acgccggtac gcaggtcgtg ttgatgacgg
     3181 cgttcggcga cgtggagacg gccgtgcaag cggtgcgcgc cggcgcgcac cattttctca
     3241 cgaagccgtt ccgctcgaac gacgaggtcg tgctcgccgt caccaaggcc gccgagcacc
     3301 gccggctcgt cgatcatgcg gtgatgctcg agcggcgact cgagcagatg cagaagttcg
     3361 gc
//
LOCUS       DATIML010000595         5374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3872236, whole genome shotgun sequence.
ACCESSION   DATIML010000595 DATIML010000000
VERSION     DATIML010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5374
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3872236"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VLJ38_10240"
     CDS             complement(<1..437)
                     /locus_tag="VLJ38_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HSU39941.1"
                     /translation="MAKLADGAVLATYGESVVLVTVVSSEERPGLDFFPLTCEYVEKT
                     YAAGKIPGGFFKREGRLRDYEVLASRIMDRPLRPLFPDGYKKDTQVIATVLSADKENP
                     TDVIALSAASAALHISNIPWDGPIAGIRLARVVGELITFPTFD"
     gene            complement(679..948)
                     /gene="rpsO"
                     /locus_tag="VLJ38_10245"
     CDS             complement(679..948)
                     /gene="rpsO"
                     /locus_tag="VLJ38_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HSU39942.1"
                     /translation="MPLEPGAKTEVVSRHRLHETDTGSPEVQVALLSQRIDTLTDHFK
                     VHSKDHHSRRGLLRMVAQRRQLLDYLKRTNVDRYRKIVASLNLRK"
     gene            complement(1028..2155)
                     /locus_tag="VLJ38_10250"
     CDS             complement(1028..2155)
                     /locus_tag="VLJ38_10250"
                     /inference="COORDINATES: protein motif:HMM:NF016946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008488 - gamma-glutamyl carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0017187 - peptidyl-glutamic acid
                     carboxylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HTTM domain-containing protein"
                     /protein_id="HSU39943.1"
                     /translation="MKWLTEERDAYLLGLMRLLLGVLLCVQVWARFDELTYWGYFGAN
                     FHLPFVPEAWVPSLATYRVLLAIELAGALLAVIGWFGREGLFVGSSIGIFLMLCDRLQ
                     YHNNRFSLLLFCFLCAFCPSDRSFLLYRGRSHALPEPLRIGPTLPRRLMQFQVSLLYL
                     SSGGGKLLDPDWRGGQTMLLRFQRGMEEAARAGAPLPGWFVDWFTTPALASLGSKAAI
                     SLELSLALALWLRKTRVPALWAGAMFHLLIQASARVELFSWLMGVAYVAFVTPELRER
                     TLRVDSRATLGRAARTFVAVFDWLARFRIEELPASETGQGSVVVVGRSGETARGWAVP
                     AALARALPVAFLAWPACALLALRQARDRSPTAGIGSSAGPG"
     gene            complement(2152..2652)
                     /locus_tag="VLJ38_10255"
     CDS             complement(2152..2652)
                     /locus_tag="VLJ38_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39944.1"
                     /translation="MISGRERTPRVRPSVLELGPRARVVFAVFYVGVMGAVIVSAQRR
                     PDHVFGFQMFNESSTVNIHLFRRVRGRRNLEALPNGSFQDRSHGVVRTLSWLERVHDP
                     VLSQLDTPTHAKYGLEGQLFRLQLALDDFVARLPRGSDTLGLVAVVETLKNGRDPQVV
                     RLKAER"
     gene            complement(2664..4277)
                     /locus_tag="VLJ38_10260"
     CDS             complement(2664..4277)
                     /locus_tag="VLJ38_10260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39945.1"
                     /translation="MKRRPRVESAQLPVRAVLATLTTVLAALLAPAARAEEPSSRAFL
                     KTSLVFIYGDDDVLHAPADSVPASPASGAGDRPGYAPLFEGYTSRYTGRENWSELDLD
                     GFAPGFVRGLTTRARLALALDASSLGMRSTPVVIEDVGSFIETAWTFGHAALERPDAL
                     TLRVFPLNADRERVGELEALGWGGAVGPNWESPYATASGPVRAARLELAAGVFQLHAA
                     LKTASFVETAATGPAVAETSYGAFGGVASRTSAPLAVALEVGHFEYGRLPGGASAPRA
                     TTTGASLRVRAGVGLVEPEPPTGFGMERSPFDTSAPFAEDAGGDTEQPNAKNPPKTQA
                     FAVAVETAHLLERLWDFDHPGATALASARAVAVVAEARWSFIDVRALFTVRNPEFVLR
                     NGSGAFAAQTLPRAAQEGSEVGLAAGIALTIARCLRPSVGVGVLRPAFVTTQAVDALG
                     QPTGATLVLHAPNDVESLPPGAAPVPVFELRPGFDVRVSSLLQALLWVQYRRDFNHTR
                     LVAAEGGALARGFRAPDRLGYGVAARAVW"
     gene            complement(4274..>5374)
                     /locus_tag="VLJ38_10265"
     CDS             complement(4274..>5374)
                     /locus_tag="VLJ38_10265"
                     /inference="COORDINATES: protein motif:HMM:NF014871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HSU39946.1"
                     /translation="RDGWGSPRRCVPRRVPIVHSGAYGKYFGRVRLELDDGAARLDEH
                     YDPLDGFELVGLDFSLVPVTAETPDDLGMAELLAPYRPAALDVLSTLDVLADAPEPLE
                     RNGATGGDSPLGNFAAEATRAAADADIAVIGASSLRHDLPPGVVDLATLVHVVPFEDP
                     VIRAELGGAALANAFERVARAAAGRECRTPVHVAGALVHLRCPCTGASCAVVFAPATE
                     VPCVNDADCRAFGGACAARKGESGVCFAPLAADAAFRVATTEYLANGGSDLFEPIPTT
                     ARVTEADSLSAVMAELVRGGAACAASDCNQGCAADLVRRANATCAAEGRTAACADEAL
                     LCARAAEACRYVPCLDGRLGAQRDGRIRIEAP"
BASE COUNT          979 a         1813 c         1847 g          735 t
ORIGIN      
        1 tggtcgaacg tcgggaacgt gatgagctcg ccgacgacgc gcgcgagacg aatgcccgcg
       61 atcgggccgt cccaggggat gttcgagatg tggagcgcgg cgctcgcggc cgagagcgcg
      121 atcacgtcgg tcgggttctc cttatcggcg gagagcaccg tcgcgatgac ctgggtgtct
      181 ttcttgtagc cgtcggggaa gagcggccgg agcgggcgat ccatgatgcg cgaggcgagc
      241 acctcgtagt cgcgcaggcg gccttcgcgc ttgaagaagc cgcccgggat cttgccggcg
      301 gcgtacgtct tttcgacgta ctcacaagtc agcggaaaga aatcgaggcc gggccgctcc
      361 tcactcgaca ccacggtgac gagcacgacg ctctccccgt aagtagcgag aacggcaccg
      421 tcggcgagct tcgccaagcg gccggtctcg agcgtgagcg gacgaccgcc aatattaacg
      481 gattctctaa cgaacatagg ttttagcgct ccttctggcg cgaacgagcc gctacgtgcg
      541 gcagtgacgc cggaagcgaa cgcctgattc ttcagcctcg atgcgtaccg cgtacgtcac
      601 cccgttcgga tggtgcgcgg cacgaagcga agttgaagcg gccgcccgct ccggaaacga
      661 attcgaaaaa agcccctgct acttacgcag gttcaaagac gcgacgatct tgcggtagcg
      721 atcgacgttc gtacgcttca agtaatcgag cagctggcgg cgttgcgcca ccatgcgcaa
      781 aagaccacgt cgcgaatggt gatccttcga gtgcaccttg aaatggtcgg tcagggtatc
      841 gatgcgctgg ctcaagaggg caacttgcac ctccggtgaa ccggtgtcgg tctcatgcaa
      901 acgatgacga gagacgactt ccgttttagc gccgggttcg agaggcatgc ttcagctttc
      961 ctagggtctg ttggaggggg ggctaggtct attgagggcg gcgagtatac gcaggttcag
     1021 gggtcggtca acctggaccg gccgacgagc caatgcccgc ggtaggactc ctatcgcgag
     1081 cttgacgaag tgccaagagg gcgcaagcag gccaggcgag aaaagcgacg gggagcgcgc
     1141 gagcgagcgc cgccggaacc gcccagcctc gcgccgtttc cccgctgcgg ccgaccacga
     1201 cgacgctgcc ctgccctgtc tcggacgcgg ggagctcctc gatacgaaag cgcgcgagcc
     1261 aatcgaatac ggccacgaag gtccgggcgg cacggccgag cgtcgcgcgc gaatcgacgc
     1321 gcagcgtgcg ctcacggagc tccggcgtga cgaacgcgac gtaggccaca cccatgagcc
     1381 agctgaagag ctccacccga gccgaagctt gaatgagtaa gtggaacatg gcgccggccc
     1441 acaacgccgg gacccgtgtc ttccgtaacc agagcgcgag cgccaggctg agctcgagtg
     1501 aaattgcggc cttggaaccg agactcgcga gcgcgggcgt ggtgaaccaa tcaacgaacc
     1561 agccggggag cggcgcgcct gcgcgtgcgg cttcctccat gccccgctga aatcgaagca
     1621 gcatggtttg tcctccgcgc caatccgggt cgagcagctt gccgccaccc gacgagagat
     1681 agaggagcga cacctgaaat tgcatgagtc ggcggggcaa ggtcggaccg atgcgcagcg
     1741 gctccggcag cgcgtgcgac cggcctcgat agagcaagaa cgagcgatca ctcggacaga
     1801 aggcacagag aaaacagaag agaagaagtg agaagcgatt gttgtgatac tgcaggcgat
     1861 cacagagcat caaaaagatc ccgatgctcg agccgacgaa gagcccctcg cgcccgaacc
     1921 agccgatcac ggccaagagc gcgcccgcga gctcgatcgc gagcagcacg cggtaagtcg
     1981 caagggaggg cacccaagct tcgggcacga acggcaggtg aaaattcgcg ccgaagtagc
     2041 cccagtacgt gagctcgtcg aagcgtgccc acacttgtac gcagagcagc acgccgagca
     2101 agagccgcat caggccgagc aagtaggcgt cgcgctcttc ggtcagccac ttcatcgctc
     2161 cgccttcaaa cgcacgacct gcggatcgcg gccgttcttc agggtctcga cgacggcgac
     2221 cagtccgagc gtgtcggagc ctctgggtag acgcgcgacg aaatcgtcga gcgcaagctg
     2281 gagccgaaag agttgtccct cgaggccgta tttggcgtgt gtcggagtgt cgagctggct
     2341 gagcaccgga tcatggacac gctcgagcca gctcagcgtg cgcacgacgc cgtgggaccg
     2401 gtcttggaag ctgccgttcg gcagcgcttc gaggttgcga cggccccgga cgcgccgaaa
     2461 caagtgaatg ttcacggtcg agctctcgtt gaacatttgg aacccgaaca cgtgatcggg
     2521 gcgccgctgt gcgctcacga tcacggcacc catcacgccg acgtagaaca ccgcgaacac
     2581 cacgcgcgcc cgcgggccga gctcgagcac cgagggccgc actcggggcg tacgttcgcg
     2641 tccgctgatc acgcgcgctc tgactaccac acggcgcgcg ccgcgacgcc gtaacccaaa
     2701 cgatccggcg cgcgaaagcc gcgcgcgagc gcaccgccct cggcggcgac cagccgcgta
     2761 tggttgaagt cacggcgata ctgcacccac aagagcgctt ggagcaggct cgagacgcgc
     2821 acgtcgaacc ccggccgcag ctcgaacacg ggcacgggcg ctgcgccggg cggcagcgat
     2881 tccacgtcgt tcggcgcgtg cagcacgagc gtcgcgcccg tcggctgacc gagcgcgtcg
     2941 acggcttggg tcgtcacgaa cgcggggcgg agcactccca cgccgacgct cggccgaaga
     3001 caacgtgcaa tcgtcaaagc gataccggcg gcgaggccca cttcgctccc ctcctgcgcg
     3061 gcgcgtggca acgtctgcgc ggcgaacgcg ccggagccgt tgcgcaagac gaactcgggg
     3121 tttcggacgg tgaacagagc gcgcacatcg atgaacgacc agcgcgcctc ggccacgacc
     3181 gcgacagcgc gcgcgctcgc gagtgcggtc gcgccggggt ggtcgaagtc ccacagccgc
     3241 tcgagcaggt gcgcggtctc gacggccacg gcgaaagcct gcgttttggg cgggttcttc
     3301 gcgttcggct gctccgtgtc accgcctgcg tcctcggcga acggcgcgct cgtgtcgaac
     3361 ggggagcgct ccatgccgaa gccggtcgga ggctccggct cgacgaggcc gacgccggcg
     3421 cgcacgcgca gcgacgcgcc cgtcgtggtg gcgcgcgggg cgctcgcacc acccggcaac
     3481 cggccgtact cgaaatggcc cacctcgagc gccacggcga gcggggccga cgtgcgcgaa
     3541 gccacgccgc cgaatgcgcc gtaactcgtc tccgcgacgg cggggccggt cgccgcagtt
     3601 tccacgaagc ttgccgtctt gagcgcagcg tggagctgga acacgcctgc cgcgagctcg
     3661 aggcgtgccg cgcgcacggg cccgctcgcc gtcgcgtacg gcgattccca attcggcccg
     3721 acggcgccgc cccagccaag cgcctcgagc tcaccgacac gctctcgatc cgcgttgagc
     3781 ggaaaaacac ggagcgtgag cgcgtcagga cgctccagag cggcatgacc gaatgtccac
     3841 gcggtttcga tgaagctccc cacatcctcg atcacgacgg gagtcgagcg catgccgagt
     3901 gacgaggcat cgagcgccag cgcgagcctc gcgcgcgtcg tgaggccgcg aacgaagccc
     3961 ggcgcgaaac cgtcgagatc gagctcgctc cagttttctc gcccggtgta gcgcgacgta
     4021 tagccttcga ataacggggc gtagccgggg cgatcacccg cgccgctcgc cggcgaggca
     4081 ggcacgctat cggccggcgc gtgaagcacg tcgtcgtcgc cgtaaatgaa gacgaggctc
     4141 gtcttgagga aagcccggct ggacggctct tccgcgcgcg ccgcgggagc gagcagcgcg
     4201 gcgagcaccg tcgtgagcgt ggcgagcacc gctcgcaccg gcagctgagc ggattctacg
     4261 cgcgggcgtc tcttcatggc gcctcgatgc ggatccggcc gtctcgctgt gcaccgagcc
     4321 gtccatcgag acacggcacg taccggcacg cctccgcggc acgcgcgcag aggagcgcct
     4381 cgtccgcgca tgccgccgtc cggccttcgg ccgcacacgt cgcgttcgcg cgccgcacca
     4441 ggtcggcggc gcagccctgg ttacaatcgg acgccgcgca cgccgcgcca ccgcgtacga
     4501 gctcggccat gaccgcgctg aggctgtcgg cctcggtgac acgcgcagtc gtcggaatcg
     4561 gctcgaagag gtcgctgccg ccgttcgcga ggtactcggt cgtcgcgacc cgaaaagccg
     4621 cgtccgccgc gagcggagcg aaacagacgc cactctcgcc cttccgtgcg gcgcatgcgc
     4681 cgccaaaagc gcgacagtcg gcgtcgttga cgcacggaac ctcggtggcc ggggcgaaca
     4741 cgaccgcgca actcgcgccc gtgcaggggc accgcaggtg cacgagcgcg cctgcgacat
     4801 gcacgggcgt gcggcactcg cgccccgccg cggctcgcgc aacgcgctcg aaggcgttcg
     4861 caagcgccgc gccgccgagc tcggcccgaa tcacggggtc ctcgaacggc acgacgtgca
     4921 cgagcgtggc gagatcgacg acgccgggcg gcaggtcatg ccggagcgat gacgcgccga
     4981 tgacggcgat gtccgcgtcg gccgcggcgc gcgtagcctc ggccgcaaag ttgccgagcg
     5041 gcgagtctcc gccagtcgca ccattgcgct cgagcggctc cggagcgtcc gcgagcacgt
     5101 cgagcgtcga gagcacgtcg agcgccgctg gacgatacgg cgcgagcagc tccgccatgc
     5161 ccaggtcgtc gggcgtctcg gccgtcaccg gcacgaggga gaagtcgagc cccacgagct
     5221 cgaatccgtc gagcggatcg tagtgttcgt cgagccgtgc cgccccatcg tcgagctcga
     5281 gccggacgcg gccgaagtac ttgccgtagg cgccgctgtg cacgatgggc acgcggcgcg
     5341 gcacgcagcg gcgcgggcta ccccagccgt cgcg
//
LOCUS       DATIML010000596         2105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4744565, whole genome shotgun sequence.
ACCESSION   DATIML010000596 DATIML010000000
VERSION     DATIML010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4744565"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VLJ38_10270"
     CDS             complement(<1..1275)
                     /locus_tag="VLJ38_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase family protein"
                     /protein_id="HSU39947.1"
                     /translation="MAPALPFSDRAERARAALTTYYTTSLDQALERHLHEDAFARALA
                     LFEDARARVPAYASFLAERGFTGADVRTRADFERVPAMTKANYYRRHTLPELCRDGRL
                     EHSDFVAVSSGSTGEPAIWPRFVSDELATAERFEQVLGDAFRVQERRTLGVVCFALGS
                     WVGGMYTTMACRHVAAKGYPLTLVTPGNNVVEILRVVRALAPHFEQTVLFGYPPFLKD
                     VIDAGAADGLCWRDHHVRLVTAGEVFSETWRALVGERMGSPELAVSTASLYGTADGGV
                     LANETPLSVTIRRFMAEHPGAARELFGEPRLPTLCQYDPCHRFFELDQGELLFTGDGG
                     APLVRYRILDRGGIVGYDAMLAFCRDHGADPLASVGALRTRAQPFVFVFGRTGFAVSY
                     YGANVYPENVAPGLDAPGVAPHVTGKFVLELAH"
     gene            complement(1375..>2105)
                     /locus_tag="VLJ38_10275"
     CDS             complement(1375..>2105)
                     /locus_tag="VLJ38_10275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39948.1"
                     /translation="DTEALELRLKVARETLPLPESGPPASPERELARREAARALTAQA
                     RLLCSAARLLEPKRATLDPVFQKIADVEKVLATNATTPIDEARSVRSACLGELTATRR
                     SRTQANPADPASDELLKQLSDASLKPSRDDRGVVVTLETPFERDDRLTTHAASRLADL
                     AGVAKAHPDFPLLVVLHAVGKLGEARETARGAQAASALRDHGAPRVETASVGMALPRV
                     DPHTPGAAARNDRLEIVFVAPNAS"
BASE COUNT          312 a          711 c          773 g          309 t
ORIGIN      
        1 gtgggccagc tcgagcacga acttgcccgt gacgtgcggc gcgacgccgg gcgcgtcgag
       61 gccgggcgcc acgttttcgg gatacacgtt ggcgccgtag taggagaccg cgaagcccgt
      121 gcggccgaag acaaacacga acggttgcgc gcgcgttcgc agcgcgccga cgctggcgag
      181 gggatcggcg ccgtggtcgc ggcaaaaagc gagcatggcg tcgtagccga cgatgccgcc
      241 acggtcgagg atgcgatagc gaacgagcgg cgctccgccg tcacccgtga agaggagctc
      301 gccctgatcg agttcgaaga aacgatgaca gggatcgtac tggcagagtg tcggcaacct
      361 cggctcgccg aagagctcac gcgcggctcc agggtgctcg gccatgaagc gccggatcgt
      421 gaccgagagc ggggtctcgt tcgcgagtac gccaccgtcg gccgtaccat agagcgacgc
      481 cgtcgagacg gcgagctcgg gtgagcccat gcgctcgccg acgagcgcgc gccacgtttc
      541 gctgaagact tcccccgcgg tgacgagccg cacgtggtgg tcgcgccagc agaggccgtc
      601 cgccgcgccg gcgtcgatca cgtccttgag gaagggcggg tagccgaaga gcaccgtctg
      661 ctcgaagtgt ggcgcgagcg cgcgaacgac gcgcaggatc tcgacgacgt tgttgcccgg
      721 cgtcacgagc gtcagcggat agcccttcgc cgcgacgtgc cggcacgcca tcgtcgtgta
      781 catgccgccg acccagctcc cgagcgcaaa gcacacgacg ccgagcgtcc gccgctcctg
      841 cacgcggaac gcgtcgccga ggacttgctc gaagcgctcc gccgtcgcga gctcgtcgct
      901 cacgaaacgc ggccagatcg ccggctcgcc cgtcgagccc gacgagacgg cgacgaagtc
      961 cgagtgctcg aggcgcccgt ctcggcacag ctccggcagc gtgtgacggc ggtagtagtt
     1021 cgccttcgtc atcgccggca cgcgctcgaa atcggcgcgc gtgcgcacgt ccgcgcccgt
     1081 gaagcctcgt tcggcgagaa aactcgcgta tgccggcact cgcgctcgcg cgtcctcaaa
     1141 gagcgcgagg gcgcgcgcga acgcgtcttc gtggaggtgg cgctcgagcg cctgatcgag
     1201 gctcgtcgtg taataggtcg tgagcgccgc gcgggcacgc tcggcgcgat cggagaacgg
     1261 aagcgctggg gccatcggtg aaccggtgtt tcccggatgc tactccgcgt gggcggcctt
     1321 cccgcgccaa aacggcgatc atgctgagcg agcgcgagcg ccgtcgcgcg cgcgtcagct
     1381 ggcgttcggt gcgacgaaca cgatttcgag ccggtcgttg cgcgcggcgg cccccggcgt
     1441 gtgtgggtcg acgcgcggga gcgccatgcc gacgctggcc gtttcgacgc gcggcgctcc
     1501 gtgatcgcgc agcgcgctcg cggcctgtgc gccgcgcgcc gtttcgcgcg cctcaccgag
     1561 cttgcccacg gcgtgcaaga cgacgagcag cgggaaatcc ggatgcgcct tggccacgcc
     1621 cgcaagatcc gcgaggcggc tcgcggcgtg ggtcgtgagg cggtcatcgc gctcgaacgg
     1681 agtttcgagc gtgacgacca cgccgcgatc gtcgcggctc ggcttgagtg aagcgtcgct
     1741 cagctgcttc aggagctcgt cgctcgcggg atcggcgggg ttcgcttgcg tgcgcgaccg
     1801 gcgcgtcgcg gtgagctcgc ccaggcacgc gctcctcacg ctgcgggctt cgtcgatcgg
     1861 cgtcgtggcg ttcgttgcga gcaccttttc gacgtccgcg attttctgaa atacggggtc
     1921 gagcgtcgct cgcttcggct cgagcaggcg cgcagcggag cacaggagac gcgcctgagc
     1981 cgtgagcgcg cgagcggctt cgcgccgcgc gagctcgcgt tccggcgacg cgggcgggcc
     2041 gctctccggc aacggcaacg tttcgcgcgc gaccttgagc cggagctcga gcgcttcggt
     2101 gtcgg
//
LOCUS       DATIML010000597         2885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2718825, whole genome shotgun sequence.
ACCESSION   DATIML010000597 DATIML010000000
VERSION     DATIML010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2718825"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VLJ38_10280"
     CDS             complement(<1..774)
                     /locus_tag="VLJ38_10280"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSU39949.1"
                     /translation="MAVFEFRGVQVGSGKAVKGFRDAENAKTLRAALRRDGILLTQAT
                     IEAERVLREQKKFDPFAFFKRPSARDVSVMTRQLATLVRAGVPLVESVAALTEQVENE
                     QLTRILTTVRESLNAGTAFAKSLEQHPRTFPTLYTNMIAAGEASGTLEAVLERLADFM
                     EGQARLRGKVAGALAYPALMSVFGIGLVAFLMVAVVPKVTTVFDSLGQALPWYTRLLI
                     TISNIVGGFWWLIIGSGVAAGFAFRRFKNSPSGKLKWAQF"
     gene            complement(974..2749)
                     /gene="gspE"
                     /locus_tag="VLJ38_10285"
     CDS             complement(974..2749)
                     /gene="gspE"
                     /locus_tag="VLJ38_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
                     /protein_id="HSU39950.1"
                     /translation="MTPQRALGQILVRHGAVQADALEPLYLTQIDKPQGLVELVLEAQ
                     LASESDVARALAAECRLPFVEKIDVDAIPAELAIRVPITYAKSHGLLVTAENDGEVTV
                     ICADPLDTAGLDDVRALFRKPLALTVAPNELVVDAINRVYERGATMNELESTEKAEDD
                     EGEIDILDSDEDAPIIRWVNGLLSQAVKERASDIHIEPEEREVLVRYRVDGQLYVAKR
                     ASRQFMSAVIARVKIMAGLNIAEKRLPQDGRISRKIGGRSIDVRVSTIPTSRDHERVV
                     MRLLHKSNVLLDLSELGFAPRDFKLMDDMIRRPDGIMLVTGPTGSGKTTTLYSCLNRI
                     NTPDINILTAEDPVEYEILGIHQVHVQPKIGLTFASALRAFLRQDPDVILVGEIRDRE
                     TAEIAIHASMTGHLVLSTLHTNDAASAVTRLVEMEIEPFLVRSTLAAILAQRLVRRLC
                     PSCKEPYEATAYELEQLGIDPERTRKRDDRKLSPRYMPHGVDYDPPGWREAHPPVFYR
                     PKGCDKCDNKGFTGRFGIYEMLVVEDVVGRLVLDNADARTIKRAAQAQGMDSLRDDGA
                     RKVLQGNTTVEEVVAATQDDVVLDD"
BASE COUNT          443 a          971 c          969 g          502 t
ORIGIN      
        1 aaattgcgcc catttgagct tgccgctcgg cgagttcttg aaacggcgga acgcgaaccc
       61 cgcggccacg cccgagccga tgatgagcca ccaaaacccg cccacgatgt tcgagatcgt
      121 gatcagcagg cgtgtgtacc aaggcagcgc ctggcccaag ctgtcgaaca ccgtcgtcac
      181 cttgggcacg acggcgacca tcaagaacgc cacgagcccg atgccgaaga cggacatcag
      241 cgccggatac gcgagcgcgc ccgcgacctt accgcgcaaa cgcgcctgac cctccatgaa
      301 gtcggcgagc cgctcgagca cggcctcgag cgtgccggat gcttcgcccg cggcgatcat
      361 gttcgtgtag agcgtcggga acgtgcgcgg atgctgctcg aggctcttcg cgaaggcggt
      421 gccggcgttc aggctctcgc gcacggtcgt gaggatgcgc gtgagctgct cgttttcgac
      481 ctgctcggtg agcgcggcga ccgactcgac gagcggcacg cccgcgcgca cgagcgtcgc
      541 gagctggcgc gtcatcacgc tcacgtcgcg cgcgctcggc cgcttgaaga acgcgaacgg
      601 atcgaacttc ttctgctcgc gcaggacgcg ctcggcctcg atcgtcgcct gcgtcagcag
      661 gatgccgtcg cggcgcagcg cggcacgcag cgtcttcgcg ttctccgcgt cgcggaagcc
      721 cttgaccgcc ttaccgctgc cgacctgcac gccgcgaaat tcgaagaccg ccatggttca
      781 ggtccccttg tgagtcgacc ggcgcgtcgg ggcgggccgg ccgcgtcggt gccagccgca
      841 agcgacgttg aggaaagtcc agcgtctctc gcgttcagga gcggcccaac caccggcctc
      901 gcgggtcttt ctcgtggcga ttggccgctc acgccgatcg agatctggtc ttccaagacc
      961 gctcaactcg tggtcagtca tcgagcacca cgtcgtcctg cgtcgcggcg acgacttctt
     1021 cgacggtggt gttgccctgg aggaccttgc gggctccgtc gtcgcgcagc gaatccatgc
     1081 cttgcgcctg cgccgcgcgc ttgatcgtgc gtgcgtccgc gttgtcgagc acgagccgcc
     1141 cgacgacgtc ctcgaccacg agcatctcgt aaataccgaa acggccggta aaacccttgt
     1201 tgtcgcactt gtcgcagccc ttcggccgat aaaaaaccgg cgggtgcgcc tcccgccaac
     1261 cgggcgggtc gtagtcgacg ccgtgcggca tgtagcgcgg agacagcttg cgatcgtcgc
     1321 gcttgcgcgt ccgctcgggg tcgatgccga gctgctcgag ctcgtaggcg gtggcctcgt
     1381 agggctcctt gcagctcggg cacaagcggc gcaccaggcg ttgcgccagg atcgcggcga
     1441 gcgtcgaacg cacgaggaac ggctcgatct ccatttcgac caggcgcgtc accgccgacg
     1501 cggcgtcgtt cgtgtgcagc gtcgagagca cgaggtggcc cgtcatcgac gcgtgaatgg
     1561 cgatctccgc cgtctcacgg tcgcggatct cgccgacgag gatcacgtcc gggtcttggc
     1621 gcaaaaaggc gcgcagcgcg ctcgcgaacg tgagcccgat cttgggctgc acgtgaacct
     1681 ggtgaatccc gaggatttcg tactcgaccg gatcctcggc cgtcaggatg ttgatgtcgg
     1741 gcgtgttgat gcggttcaag cacgagtaga gcgtcgtggt cttgccgcta ccggtcggcc
     1801 ccgtcacgag catgatgccg tcggggcggc ggatcatgtc gtccatgagc ttgaagtcgc
     1861 gcggcgcgaa gccgagctcg gagaggtcga gcaagacgtt cgacttgtgc aagagacgca
     1921 tcacgacccg ctcgtggtcg cggctcgtcg ggatggtcga gacgcgcacg tcgatgctgc
     1981 ggccgccgat tttacgggaa atgcggccgt cttgcggcag gcgcttctcg gcgatgttca
     2041 ggccggccat gatcttcacg cgcgcgatca cggcgctcat gaactggcgg ctcgcgcgct
     2101 tggccacgta aagctgcccg tccacgcggt agcgcacgag cacctcgcgc tcctccggct
     2161 cgatatgaat gtcgctcgct cgctccttga ccgcctgcga caacaggccg ttcacccagc
     2221 ggatgatcgg cgcgtcctcg tccgagtcga gaatgtcgat ctcgccctcg tcgtcctcgg
     2281 ccttctcggt cgactcgagc tcgttcatcg tggcgccgcg ctcgtagacg cggttgatgg
     2341 cgtccacgac gagctcgttc ggagcgaccg tgagcgcgag cggctttctg aacagcgccc
     2401 gcacgtcgtc gagccccgcc gtgtcgagcg gatcggcgca gatcaccgtc acctcgccgt
     2461 cattttcggc ggtgaccaag aggccgtggc tcttcgcgta cgtgatgggc acccgaatcg
     2521 cgagctcggc cgggatcgcg tccacgtcga tcttttcgac gaacggcaag cggcactccg
     2581 ccgcgagcgc acgggccacg tcgctctcgc tcgcgagctg cgcctcgagc acgagctcga
     2641 ccaagccctg cggcttgtcg atttgcgtga ggtacaaagg ctcgagcgcg tccgcctgca
     2701 cggcgccgtg tcgcacgagg atctggccga gagcgcgttg gggcgtcatt cgactcgctc
     2761 gacgttcacg ctgcgcgcga tcgggttgac gatgatggga gagtcgagct cgccgcggcg
     2821 gccacccgcg cgttgacgag cgggtgtgcg cgccggcgcg ggcctggccg gcgcggcctt
     2881 ggtgg
//
LOCUS       DATIML010000598         1791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1280022, whole genome shotgun sequence.
ACCESSION   DATIML010000598 DATIML010000000
VERSION     DATIML010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280022"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..>1791
                     /locus_tag="VLJ38_10290"
     CDS             215..>1791
                     /locus_tag="VLJ38_10290"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSU39951.1"
                     /translation="MESDLQAELLDAVASGLLVWRPDDLADVHTLRLVYLNRIAAKWL
                     SLPPHASVGKLMFELFPGTELERAEAILEVARSREAKDLGLLTWIGAGASSVLMRAVA
                     VGDRAVAVLVEDHDAVQRAESETLRVNRFLDSIIEHIPAMVFMKDAEELRFERFNRAG
                     EELLGLPRGDLLGKSDFDFFPEAQASFFVAKDREVLTGGAIDIPEEPIQTKHGERWLH
                     TRKIPLLDEEGVPRHLLGVSIDITDKKRAQDILRASHDELERRVLQAEEQLRHAQKLE
                     AVGRLAGGVAHDFNNLLSVIQSAAALALDALDDGDEVRADLAEIQGAAQRAGRLTRQL
                     LAFGRRQLLEPRVVDLNEVLMSSREMLARMIGEDIELRYALAPELGKVKVDVGQLEQV
                     VMNLVVNARDAMPRGGRVTLETMDVVFDEAYEATHVEVAAGAHVMLAVSDTGVGMDRA
                     TLDRAFEPFFTTKEAGKGTGLGLSTVFGIVKQSGGSIFAYSEPERGATFKLYFPLASE
                     GRTTHEPQKPQSQPLATG"
BASE COUNT          323 a          601 c          581 g          286 t
ORIGIN      
        1 ccggcgacgc gcaagccccg gcaaggaacg cgagtgggaa aacacgggcg atcgaggaac
       61 gaggatccga taggcgcatg gcacttactt gagccggatt ctcccgcgac tgcaaccaca
      121 tcgacgcctg cgcggcgtgc aacacggtca atcggcgcgt gttacgctgt acgttccttg
      181 cggcctaacg ccgcccggaa ttgcgaggcc gagggtggaa tcggacctac aagcggagtt
      241 actcgacgcc gtcgcgtccg gcttgctcgt ctggcgcccg gacgacctcg ccgacgtcca
      301 cacgttgcgg ctcgtttact tgaaccgcat cgccgcgaag tggctctcgc ttccgcctca
      361 cgcaagcgtc ggtaagctca tgttcgaact cttcccgggc accgagctcg aacgcgcgga
      421 ggcgatcctc gaagttgcga ggtcgcgcga ggcgaaggac ctcggcctct tgacgtggat
      481 cggcgcaggc gcaagctcgg tactcatgcg cgcggtcgcc gtgggcgacc gtgccgtcgc
      541 cgtgctcgtg gaagaccacg acgccgtcca gcgcgccgag agcgagaccc tgcgcgtcaa
      601 tcgcttcctc gattcgatca tcgagcacat ccccgccatg gtgttcatga aggacgccga
      661 agagctccgc ttcgagcgct tcaatcgcgc gggggaagag ctcttgggcc tcccgcgcgg
      721 ggacctgctc ggcaagtcgg atttcgactt ttttcccgaa gcgcaagcga gcttcttcgt
      781 cgccaaggac cgcgaggtct tgaccggggg agccatcgac attccggaag agccgattca
      841 aaccaagcac ggtgaacgct ggctccacac gcgcaaaatc ccgctgttgg acgaagaggg
      901 cgtgcctcgc cacttgctcg gcgtctcgat cgatatcacg gacaagaagc gcgctcagga
      961 catcttgagg gcatcccacg acgagctcga gcgtcgcgtg ctgcaagccg aagaacagct
     1021 caggcacgcc cagaagctcg aagccgtcgg acggctcgcc ggcggcgtcg cccacgactt
     1081 caacaatctg ctctccgtga ttcaaagcgc ggccgcgctc gcgctcgacg cgctcgacga
     1141 cggcgacgag gttcgcgccg atctggccga aattcaaggc gccgcccagc gcgcggggcg
     1201 cctcacgcgc cagctgctcg cgttcggccg gcgccagctg ctcgagccgc gcgtcgtcga
     1261 tctcaacgaa gtcctgatgt cgtcacgcga aatgctcgcg cgcatgatcg gggaggacat
     1321 cgagctccgt tacgcgctcg cgcccgagct cggcaaggtc aaggtggacg tagggcagct
     1381 cgagcaggtc gtgatgaacc tcgtcgtcaa cgcccgcgac gccatgccgc gcggaggccg
     1441 cgtgacgctc gagaccatgg atgtcgtctt cgacgaggcg tacgaagcga cgcacgtcga
     1501 ggtcgcggcg ggcgcgcacg tcatgctcgc cgtgagcgat acgggggtcg gcatggaccg
     1561 cgcgacgctc gaccgcgcgt tcgaaccgtt cttcacgacc aaggaggcgg gcaagggcac
     1621 cgggctcgga ctctctacgg tcttcggcat cgtcaagcaa agcggcggtt cgatcttcgc
     1681 ttacagcgag ccggagcgtg gcgcgacctt caagctctac ttcccgctcg cgtccgaggg
     1741 ccgcacgacg cacgagccgc aaaagcctca gtctcagcct ctcgctacgg g
//
LOCUS       DATIML010000599         1793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5322508, whole genome shotgun sequence.
ACCESSION   DATIML010000599 DATIML010000000
VERSION     DATIML010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5322508"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VLJ38_10295"
     CDS             complement(<1..325)
                     /locus_tag="VLJ38_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HSU39952.1"
                     /translation="MDVLMVTAELAPYARVTEAGDVVFALAKGLRQLGHRVTIALPRY
                     AAFEEHGLLLARRLTPLTVDGAEVTVFDGQLSTGVELVLFDVPGLTAPGELKQREPDA
                     RTVEAF"
     gene            462..1379
                     /gene="argB"
                     /locus_tag="VLJ38_10300"
     CDS             462..1379
                     /gene="argB"
                     /locus_tag="VLJ38_10300"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HSU39953.1"
                     /translation="MDDLISKAQVLHEALPYIRRFQGRTFVVKYGGHAMVDDELKESF
                     SRDVCLLRLVGIRVVVVHGGGPQINRMLERVGISSTFSAGLRVTDDDTMELVEMVLGG
                     GVNQEIVGMICQHGGRAIGLSGKDDRFLTAKKLDRVAAKDEHGETVLVDLGRVGEVVH
                     VETGVVEQLASNGFIPVIAPIGVDDQGRSLNVNADTAAGAIGGALRAAKLILMTDVDG
                     VKTASGELLSSLDALTAEKLIADRVITGGMIPKVRCALEAVQSGVEQVHVIDGRRRHA
                     LLLEIFTDRGIGTEIRRPSARRDASESKS"
     gene            1394..>1793
                     /locus_tag="VLJ38_10305"
     CDS             1394..>1793
                     /locus_tag="VLJ38_10305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSU39954.1"
                     /translation="MPRSAEVDETTIVRPAEVPDGAIRRALRVPPEAAGQRLDVFVQT
                     QLRHTSRTRAQRIVEKSAFNLQGKRLRSNDRVREGAIILLWREPFEPDEEQPPLPILY
                     EDPHLLVVDKPPLVAVHPTARHHVHTVIVRL"
BASE COUNT          307 a          612 c          604 g          270 t
ORIGIN      
        1 tgaacgcctc gaccgtgcga gcgtcgggct cgcgttgctt gagctcgccc ggcgccgtga
       61 gcccggggac gtcgaagagc acgagctcga cgcccgtcga gagctgaccg tcgaacaccg
      121 tcacctcggc gccgtccacg gtgagaggcg tcagacgtcg cgcgagcaat agcccgtgct
      181 cctcgaaggc ggcgtagcgc ggcaaggcaa tcgtgacccg atgcccgagt tggcgcaggc
      241 ctttggcgag ggcgaaaacc acgtcgccgg cctccgtcac gcgcgcgtag ggcgcaagct
      301 cggcagtcac catcaacacg tccatgggcg gggcggtcct acacccgagt gccgcaggaa
      361 ccaagggcgg aaaacgcgcg aggcccgagt cgagccgacc ggcccgaccc tgcgcttgcg
      421 ggtggccgct cggcgcaaca gggtgtatgc cgccccagcc gatggacgac ctcatcagca
      481 aagctcaggt tctgcacgaa gcgttgccgt atatccggcg ctttcaaggc cgcactttcg
      541 tcgtgaagta cggcgggcac gccatggtcg acgacgagct caaagagagc ttttcgcggg
      601 acgtctgcct gctccgcctc gtcggcatcc gcgtggtcgt cgtgcacggc gggggcccgc
      661 aaatcaaccg catgctcgag cgcgtcggca tttcatcgac cttctcggcc ggcctgcgcg
      721 tgactgacga cgatacgatg gagctcgtcg agatggtgct cggcggcgga gtgaatcagg
      781 aaatcgtcgg gatgatttgc cagcacgggg ggcgcgcgat cggcctctcg ggcaaagacg
      841 accgcttcct caccgccaag aagctcgatc gcgtcgccgc caaggacgag cacggcgaga
      901 ccgtgctcgt cgatctcggc cgggtgggtg aggtcgtgca tgtcgaaacc ggggtggtcg
      961 agcagctcgc gagcaacggt ttcatccccg tgattgcgcc catcggcgtc gacgaccaag
     1021 gtcgttcgct caacgtgaat gccgacacgg ccgcgggggc gatcggcggc gcgctgcggg
     1081 cggccaagct catcttgatg acggacgtgg acggcgtgaa gacggcctcg ggcgagctcc
     1141 tgagctcgct cgacgccctc acggccgaaa agctgattgc ggatcgcgtc atcacgggcg
     1201 gcatgattcc gaaggtccgc tgcgcgctcg aagccgtgca gtcgggcgtc gagcaagtgc
     1261 acgtcatcga cggccgccgc cgccacgcgc tcttgctcga gatcttcacc gatcgcggca
     1321 tcggcaccga gatccgccgc ccttcggcgc gacgcgacgc ctcggagtcg aagagctaga
     1381 ctgctcgtcg ccgatgcccc gctccgccga agtcgacgag acgacgatcg tgcgaccggc
     1441 ggaagttccc gacggagcga tccggcgcgc cctgcgcgtc ccccccgaag cggctggcca
     1501 gcgcctcgac gttttcgttc agacgcagct gcgacacacg agccgcacgc gcgcgcagcg
     1561 catcgtcgaa aagagcgcct tcaatctcca aggcaagcgc ttgcgctcca acgaccgcgt
     1621 gcgcgagggc gccatcatcc tgctctggcg cgaaccgttc gagccggacg aggagcaacc
     1681 gccgctgccg atcttgtacg aagatccgca cctcttggtg gtggacaagc cgccgctcgt
     1741 cgcggtgcat ccgacggcgc gccatcacgt gcacaccgtc atcgtgcgcc tgc
//
LOCUS       DATIML010000600         2576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_988443, whole genome shotgun sequence.
ACCESSION   DATIML010000600 DATIML010000000
VERSION     DATIML010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_988443"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VLJ38_10310"
     CDS             complement(<1..359)
                     /locus_tag="VLJ38_10310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39955.1"
                     /translation="MLDLPENGLYRTTQPMTGHEETFPAGVLVYVGELPNGGGKFVVR
                     PGSNRRNRWFWGDPTTPLRQPTWARTLKQLPSEGFYTLPEALEFEGGGKWLKNAIVQL
                     GYDERGRGIIFVGQWKE"
     gene            441..1103
                     /locus_tag="VLJ38_10315"
     CDS             441..1103
                     /locus_tag="VLJ38_10315"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSU39956.1"
                     /translation="MPSVKKTKPTPKPAVKKPALGNKIARSPAAKTAKVGPSAKQARA
                     TAAKAGSKSAAQKPAASKASPSKDVLDVGSRAPAFKLKDQSGKEVSSASLAGSPYVLY
                     FYPKDDTTGCTKQACGFRDSHRSFGRVARVLGVSPDSEASHARFAQKYGLPFTLLSDP
                     DKTLANAYGVWVKKQNYGREYMGISRSTFLVDGKGVIQQAWRGVRVDGHVDTVLSAAK
                     AL"
     gene            complement(1121..1837)
                     /locus_tag="VLJ38_10320"
     CDS             complement(1121..1837)
                     /locus_tag="VLJ38_10320"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSU39957.1"
                     /translation="MALEGLVRADELSVVFQPIVGMNDGELFAYEALVRCTRPEISSP
                     PVLFERAVSAGCVGRLGRMVREIAVPLASGIPLFLNVHPLELEEAWLVRPDDPIYGHD
                     SDVFLEITESVPLTHFELCHHVLSEVRVRGGVHLVVDDLGAGYSNLKRIIDLEPRVVK
                     LDRELIVGIDKSQRQQRLVANVVRLCCDLDATVVAEGIETASEFDALRDTGVHYGQGF
                     LFARPQFPLPAVSWPPPRAG"
     gene            2166..>2576
                     /locus_tag="VLJ38_10325"
     CDS             2166..>2576
                     /locus_tag="VLJ38_10325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39958.1"
                     /translation="MDSFSLFTTSCAGHLRLVRVAGSYAAALLLLLAGCANDAKKSAA
                     LAQEQVKALAAVVHEDVREVREGLPLGAAELAKLLPAEGDIDASTAREALEKTRNKIQ
                     DLRIAKSTFFALVAPNGIVIRDDQQQDRLAGKNLV"
BASE COUNT          490 a          826 c          848 g          412 t
ORIGIN      
        1 tcttctttcc actggccgac gaagatgatg ccgcgcccgc gctcgtcgta accgagctgg
       61 acgatggcgt tcttgagcca cttgccgccg ccttcgaatt cgagcgcctc gggcagggtg
      121 tagaagcctt cagacgggag ctgcttcagc gtgcgagccc acgtcggttg gcgaagcggc
      181 gtcgtcggat caccccagaa ccaacgattg cgacgattgc tgccgggacg aacgacgaac
      241 ttgccgccgc cgttcggtag ctctccgacg tagacgagga caccggcggg gaatgtttcc
      301 tcgtggccgg tcatgggctg agtcgtgcgg taaaggccat tttcgggcaa atcgagcatc
      361 gcttctcacc ttggaacgtc gcaggggccg gcacaatagc cgaaccctcg agcgcgacaa
      421 tgggttagct ttgcgccgcc atgccgagcg tcaagaagac gaagcccact cccaaacccg
      481 ccgtgaagaa gccggctctg ggaaacaaga tcgcgcgaag cccggccgcg aagacggcga
      541 aagtcggccc gagcgccaag caggcgcgcg ccaccgcggc gaaagccggc tcgaagagcg
      601 cggcccagaa gcctgccgcc tcgaaggcga gcccgagcaa agacgtgctc gacgtgggta
      661 gtcgcgcccc tgccttcaaa ttgaaagatc agtcgggcaa agaagtgtcc tcggcttcgc
      721 tcgccggttc gccgtacgtt ctctattttt atccgaagga cgatacgacc ggctgcacca
      781 agcaggcatg cggctttcgc gattcacacc gctcgttcgg tcgcgtcgcg cgcgtgctcg
      841 gcgtgagccc cgattcggaa gcgagccacg cccgcttcgc gcaaaaatac ggcctgcctt
      901 tcacgctgct ctccgacccc gataagacgc tcgcgaacgc ctacggcgtc tgggtgaaaa
      961 aacagaacta cggtcgcgag tacatgggta tttcgcgcag cacgttcctc gtcgacggca
     1021 agggcgtgat tcagcaggcg tggcgcggcg tgcgtgtcga cggacacgtg gatacggtgc
     1081 tcagcgccgc caaagcgctg taacgccgag gcggtcgcgc tcagcccgcg cgcggcggcg
     1141 gccaggagac ggcgggcagc ggaaactgcg gccgcgcgaa gagaaagccc tggccgtagt
     1201 ggacgcccgt gtcgcgcaag gcgtcgaact cactcgctgt ttcgatgcct tcggcgacga
     1261 cagtggcgtc gaggtcgcag cagagccgca cgacgttggc gacgagacgc tgctggcgct
     1321 ggctcttgtc gatgccgacg atgagctcac ggtcgagctt cacgacgcgt ggctcgagat
     1381 cgatgatgcg cttgaggttc gagtacccag cgccgagatc gtcgaccacc aagtgcacgc
     1441 cgccgcgaac gcgcacttcg ctcaaaacgt gatggcagag ctcgaaatgc gtgagcggca
     1501 ccgactcggt gatctcgagg aacacgtcgc tgtcgtggcc gtaaatcgga tcgtcggggc
     1561 ggacgagcca agcctcttcg agctcgagtg ggtgcacgtt gaggaagagc gggatccccg
     1621 aggcgagcgg taccgcgatc tcacgcacca tgcgaccgag tcgtcccacg cagccggcgc
     1681 tcacggcgcg ttcgaacaag acgggcgggc tcgaaatctc cgggcgcgtg cagcggacca
     1741 aggcttcgta cgcgaagagc tcgccatcgt tcatcccgac aatcggctgg aaaacgacgc
     1801 tgagctcgtc ggcgcgcacg agcccttcga gagccaagaa ggaatccctg ccggaggtca
     1861 gactggtggg gacggggaca gcgtgcatgg ccacagggcg ggagcttggc gcgctcagcg
     1921 ggacactccg caaaactcag ttgacgccac agtgctccac tctctccttt aacacgcaag
     1981 ctcgtccttc tcaaccgctc gcccgcgcct cgccggcgcc ctgccggaaa aagcatgaca
     2041 tgcggtggcg caccggctca gactctccgc catctcccat ggcaagcgtg caggcacgaa
     2101 cgagctcgaa tcgccctaga cccgttgccg gctggtttcg tgtgagctca cgctcgccgt
     2161 ctcgcgtgga ttcgttctca cttttcacta catcgtgcgc gggacacctg cggctcgtgc
     2221 gagtcgccgg ctcgtacgcc gcggcccttt tgctgctgct cgcgggctgc gccaacgacg
     2281 cgaagaagag cgcggcgcta gcgcaggaac aggtgaaggc gctcgccgcc gtggtgcacg
     2341 aagacgtgcg ggaggtgcgc gagggactgc cgctcggcgc ggcggagctt gcgaagctcc
     2401 tgccggccga aggtgacatc gacgcgtcga ccgcgcgcga agcgctcgag aagacgcgaa
     2461 acaagatcca agatctgcgt atcgcgaagt cgacgttctt cgcgctcgtc gcgccgaacg
     2521 ggatcgtcat ccgcgacgat cagcagcagg atcggctcgc ggggaagaat ctggtt
//
LOCUS       DATIML010000601         2991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5609198, whole genome shotgun sequence.
ACCESSION   DATIML010000601 DATIML010000000
VERSION     DATIML010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5609198"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1420
                     /locus_tag="VLJ38_10330"
     CDS             <1..1420
                     /locus_tag="VLJ38_10330"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSU39959.1"
                     /translation="VCGKSVHVELEGSGTELDRSIIEAIKDPLMHAVRNAIDHGIESA
                     EKRVAAGKPASGRLTFRAFHEGGQVNIEVSDDGGGINTDKVRARAVERGLVAHDRALR
                     MNERELLHLIFLPGFSTAESVTHLSGRGVGMDVVKTNIEKIGGTVDIRSERGLGTTLK
                     IKIPLTLAIIPALIVASGGERFAIPQVNLLELVRLEGAQSRRGIETLHGTPLYRLRGN
                     LLPLVFLNEALDLPGPGAGVDVINIVVLQADDRQFGLVVDGISDTEEIVVKPLGKELK
                     RLDVFAGATIMGDGRVALILDVLGVARHAGVVSGARDRGVAEPAAPPAVAAEPRETLL
                     LFRATGSERMAIPLALVARLEELAPERIERAGGREVVQYRGAILPLIRLDEDRPNGRR
                     ALYDGPLKVIVYSEHGRSVGLVVDEILDVVEEVVRVEDAAAGRGLRGMAVIQGKVTDL
                     LDVHAAIRRQDPAFFERKEAAA"
     gene            1438..1893
                     /locus_tag="VLJ38_10335"
     CDS             1438..1893
                     /locus_tag="VLJ38_10335"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSU39960.1"
                     /translation="MNDAQKLCTFTLADLVFGVEVTNVQEVLRFQPMTRVPLASSTVR
                     GLINLRGQIVTAVDVRARLGFSTLPDAHEPMNVVLCSKDGVVSLLVDQIGDVLEVPPS
                     AFERAPTTLPTVLRDVVRGVYKLEHGLLLLLDVERVVLLPEHRRVEDAA"
     gene            1948..>2991
                     /locus_tag="VLJ38_10340"
     CDS             1948..>2991
                     /locus_tag="VLJ38_10340"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSU39961.1"
                     /translation="MQEPSEHHKTNGNGDSMRPLGLARGDEHEVAELKSKLRALEERL
                     GSAQRAEVDLKAKVDTILAVVDAAAGGDLTRQITIGGDDAVGRLALRLNAFFGTMRKS
                     VGNIADNATTLGAASEELSSVAKQMTSNATQTSTQANVASSAVEEVNRNIHTVAASTE
                     EMSASIKEIAKNASDAARVAVSAVRAAETTNGIVAKLGASSADIGKVIKVITSIAQQT
                     NLLALNATIEAARAGEAGKGFAVVANEVKELAKETARATEDISQKIEHIQSDTRSAVD
                     AITQIGSIINQINDIQNTIACAVEEQTATTNGISRSLGDAARGSGDIAHNITGVARAA
                     QSTTAGASDTERAA"
BASE COUNT          549 a         1027 c          992 g          423 t
ORIGIN      
        1 cgtctgcggc aaatccgtgc atgtcgagct cgagggcagc gggacggagc tcgaccgctc
       61 gatcatcgaa gccatcaagg acccgctgat gcacgcggtc cgcaacgcca tcgaccacgg
      121 catcgaaagc gctgaaaagc gcgtcgccgc gggcaaaccc gcgagcgggc ggctcacgtt
      181 ccgcgccttt cacgagggcg gccaggtcaa catcgaggtc tccgacgacg gcggcggcat
      241 caacacggac aaggtccgcg cgcgtgccgt cgaacgcggc ctcgtcgcgc acgatcgcgc
      301 gctgcgcatg aacgagcgcg agctcttgca cctgatcttt ttgcccggtt tctccacggc
      361 cgaaagcgtc acgcacctct ccggccgcgg tgtcggcatg gacgtagtca agaccaacat
      421 cgaaaagatt ggtgggacgg tcgacattcg ctccgagcgc ggcctcggca cgacgctcaa
      481 aatcaagatc ccgctcacgc tcgcgatcat tccggccctg atcgtcgcga gcggcggcga
      541 acgcttcgcg attccgcaag tgaacctgct cgagctcgtg cggctcgagg gcgcgcagtc
      601 gcggcgcggc atcgaaaccc tgcacggtac gccgctctat cggctgcgcg gcaacctgct
      661 cccactcgtc tttttgaacg aggcgctcga cttgccgggt ccgggtgccg gcgtcgacgt
      721 catcaacatc gtcgtgctcc aagccgatga tcggcagttc gggctcgtcg tcgacggcat
      781 cagcgacacc gaggagatcg tcgtcaagcc gctcggtaag gagctcaagc gcctcgacgt
      841 gttcgccgga gcgacgatca tgggcgacgg gcgcgtggcg ctcatcctcg acgtgctcgg
      901 cgtggcacgc cacgcgggcg tcgtctcggg cgcgcgcgac cgcggtgtgg ccgaacctgc
      961 cgcgcccccg gccgtggcgg cagaaccccg cgaaacgctg ctgctctttc gggcgacggg
     1021 ctccgagcgc atggcgatcc cgctcgcgct cgtggcgcgg ctcgaggagc tcgcacccga
     1081 gcgcatcgaa cgcgcgggcg gacgcgaagt cgtgcagtac cgcggcgcga tcctgccgct
     1141 gattcggctc gacgaagatc gcccgaacgg ccgccgggcg ctctacgacg ggccgctcaa
     1201 ggtcatcgtg tactccgagc acggtcgcag cgtggggctc gtcgtcgacg agatcctcga
     1261 tgtcgtcgag gaagtcgtgc gggtcgagga cgccgccgcg gggcgcgggc tgcgcggcat
     1321 ggcggtgatc cagggcaaag tcacggatct gctcgacgtg cacgccgcga tccgccgcca
     1381 ggatcccgcc ttcttcgagc gtaaggaagc ggccgcctag gccgaggaga cgagtccgtg
     1441 aacgacgccc agaagctctg caccttcacg ctcgccgatc tcgtgttcgg cgtcgaggtc
     1501 acgaacgtgc aggaagtgct gcgttttcag ccgatgacgc gcgtaccgct ggcttcgtcg
     1561 acggtgcgcg ggctgatcaa tttgcgcggg cagatcgtga cggccgtcga cgtacgggcg
     1621 cggctcggtt tttcgacgct gcccgacgct cacgagccca tgaacgtcgt gctctgcagc
     1681 aaagacggcg tcgtgagcct gctcgtcgac cagatcggcg acgtgctgga ggtcccgccg
     1741 agcgcgttcg agcgcgctcc cacgacgctc cccaccgttt tgcgcgacgt cgtgcgcggc
     1801 gtgtacaaac tcgagcacgg gctgctcttg ttgctcgacg tcgagcgcgt cgtgctgctg
     1861 cccgaacacc gtcgcgtcga ggacgccgcg taacgaaagt tttccgcggc gcggagcgcg
     1921 ggaccgaggt tgagaggatc cgagaccatg caagaaccca gcgaacatca caaaacgaac
     1981 ggtaacggcg actcgatgcg cccgctcggc ctcgctcgcg gcgacgagca cgaggtcgcc
     2041 gagctcaaat ccaagctgcg tgcgctcgag gaacggctcg gctcggccca gcgcgccgag
     2101 gtcgacctca aagcgaaagt ggacacgatt ttggccgtgg tcgatgcggc cgcaggcggc
     2161 gatctcacgc gccaaatcac gatcggcggc gacgacgccg tgggccgcct cgcgctgcgg
     2221 ctgaacgcgt ttttcggcac gatgcgcaag agcgtcggca acatcgcgga caacgcgacc
     2281 acgctcggcg cggcgtccga ggagctctcg tcggtcgcca agcagatgac ctcgaacgcc
     2341 acgcaaacct cgacgcaagc caacgtggcc tcgtccgcgg tcgaggaggt caaccgcaac
     2401 atccacacgg tcgcggccag caccgaggag atgtcggcaa gtatcaaaga aatcgcgaag
     2461 aacgcctccg acgccgcgcg cgtcgccgtc tcggccgtga gagcggccga aaccaccaac
     2521 ggtatcgtcg ccaagctcgg cgcgagcagc gccgacatcg gcaaggtcat caaggtcatc
     2581 acctcgatcg cgcaacagac gaacctgctc gcgctgaacg ccacgatcga agccgcgcgc
     2641 gccggtgaag cgggcaaggg cttcgccgtc gtcgcgaacg aagtgaaaga gctcgcgaag
     2701 gagaccgccc gcgcgaccga ggacatcagc cagaagatcg agcacatcca gagcgacacg
     2761 cgctcggcgg tcgatgccat cacgcaaatc ggcagcatca tcaaccagat caacgacatc
     2821 caaaacacga tcgcctgcgc cgtcgaggag cagaccgcca ccaccaacgg catcagccgg
     2881 agcctcggcg acgccgcgcg cggcagcggc gacatcgcgc acaacatcac gggcgtcgcg
     2941 cgcgccgctc agagcacgac cgccggcgcg tcggacaccg agcgcgcggc t
//
LOCUS       DATIML010000602         3163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4746029, whole genome shotgun sequence.
ACCESSION   DATIML010000602 DATIML010000000
VERSION     DATIML010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3163
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4746029"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(175..1605)
                     /locus_tag="VLJ38_10345"
     CDS             complement(175..1605)
                     /locus_tag="VLJ38_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HSU39962.1"
                     /translation="MLLGRPDVPRPTNAARDKARLLLEQALGPSKVVTGADACAAYAE
                     DESEAEGVTPDAVVLAESAEDILAALRVARETSVPITPRAAGTGRTGGAVPVAGGIVL
                     STFGMKSIKEIDRRDGVAVVEPGVVLADLHAAVEAEGWFYPPDPNSLADCCLGGNVAE
                     NAGGPRALKYGVTRDWVLGVDAFLIGGQRIHAGRRTTKGVTGYDVTGLLVGSEGTLAV
                     FGDVTLGLMPKPEHVMTLMTLFSDVRAAGDAVERAVAAGLLPRCIELLDGPTLEAMRR
                     AGNAIDARAGAMLLVEFDGDERTCERDAERFGETAEAAHALEVLVAQDAAQRARLWSA
                     RREMSRAVRKLSKKKLSEDVVVPRHAIGALLEHVAVLGERERVRHLTYGHAGDGNLHV
                     NFLWDDDDEVPAVVRAIEGLFREVVRLGGTLSGEHGIGVLKAPYLPLEQAPELIELQR
                     DLKRVFDPGGLLNPGKIFPAAPHRAC"
     gene            complement(1643..2341)
                     /locus_tag="VLJ38_10350"
     CDS             complement(1643..2341)
                     /locus_tag="VLJ38_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSU39963.1"
                     /translation="MTASRLQKPLRHQYVRQPVPIFFPSDEEVPESALHLRLRTALFL
                     ILERRLRGRAYVGSDQFVYWDSTNPKLCLAPDAFVRLGGPDELLPSYQTWRHGAPEVA
                     VEIISASDGGPRELERRLERYRQCAVEELVYFDPEDRKRPLRLWDWLESDLVERELTA
                     PNARYCDKLEAYWCLHQDPRLGVMLRLADGADGSGLWPTPEEAEIELRNSEREAAARR
                     IAELEAELRRRGPA"
     gene            complement(2400..2879)
                     /locus_tag="VLJ38_10355"
     CDS             complement(2400..2879)
                     /locus_tag="VLJ38_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39964.1"
                     /translation="MDKQSLLAKLERALQGELASASRAAKETADAANHPEARPENDKD
                     TRKIELSYLAAGQAARAKELETGIALLSQIPARSFASNEPLAVGALVELDVDGKAQRV
                     LLSPAGGGLKLADEQGEINVVTPSSPLGRGITGKSAGDAFELAIGGLRREVTIVRAE"
     gene            complement(2911..>3163)
                     /locus_tag="VLJ38_10360"
     CDS             complement(2911..>3163)
                     /locus_tag="VLJ38_10360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="high-affinity nickel-transport family protein"
                     /protein_id="HSU39965.1"
                     /translation="TVHDARSALVYLVVFGAGTIASMMLVTALLAVPLRIAAARFASA
                     ERVLARASGALSLAFGLFLAYRIGFVQGLLFGEAKWTPE"
BASE COUNT          477 a         1079 c         1082 g          525 t
ORIGIN      
        1 aagccgtcgg cgtaccaggg aaagatgccc gattcgtagg ccaagagcag gcgctcgggc
       61 gtgagatcgc cgcccacggc caagagccct tcggcgtcgg cccatgccgg atcggggaaa
      121 gtcatgggcc cggtcggtga cagcaagacg gggcgcgcgc ggcgggccat ggctctagca
      181 ggcgcggtga ggcgctgcgg ggaagatttt gccggggttc aagagcccgc ctggatcgaa
      241 cacgcgcttg agatcgcgct gcagctcgat gagctcgggc gcttgttcga gcgggaggta
      301 cggcgccttg agcacgccga tgccgtgctc gccgctcagc gtgccgccga gccgcacgac
      361 ttcgcggaag agtccctcga tggcgcggac gacagcggga acttcgtcgt cgtcgtccca
      421 caagaaattg acgtgtaggt tgccgtcgcc ggcgtggccg tacgtgagat ggcgcacgcg
      481 ctcgcgctcg ccgagcacgg cgacgtgctc gagcagcgcg ccgatggcgt gacgcggcac
      541 gaccacgtcc tcgctgagct tcttcttgct gagcttgcgc accgcgcggc tcatttcccg
      601 ccgtgccgac cagagccgcg cgcgctgagc cgcgtcttgc gcgacgagca cttcgagtgc
      661 gtgcgcggct tcggccgttt ctccgaagcg ctcggcgtcg cgctcgcacg ttcgctcgtc
      721 gccgtcgaat tcgacgagca acatcgcacc ggctcgcgcg tcgatggcgt tgcccgcgcg
      781 gcgcatggcc tccagcgtcg gtccgtccaa aagctcgatg cagcgcggca agagcccggc
      841 cgcgacggcg cgctcgacgg cgtcgcccgc ggctcgcacg tcgctgaaga gcgtcatcag
      901 cgtcatcacg tgctccggtt tcggcatcaa gccgagcgtt acgtcgccga ataccgcgag
      961 cgtgccttca ctgccgacga gcaggcccgt cacgtcgtag cccgtcacgc ctttggtcgt
     1021 gcgccggccg gcgtggatgc gctgcccgcc gatcagaaat gcgtccactc cgagtaccca
     1081 gtctcgtgtg acgccgtact tgagggcgcg tggcccgccg gcgttctcgg cgacgttgcc
     1141 cccgagacag cagtccgcga gcgagttcgg atccggcgga taaaaccagc cttccgcttc
     1201 gacggccgcg tgcagatccg cgagcacgac gcccggctcc acgacggcga cgccgtcccg
     1261 ccggtcgatc tctttgatgc tcttcatccc gaaggtcgag agcacgatgc cacccgcgac
     1321 cggtaccgcg cctcccgttc gtcccgtccc ggccgcgcgc ggcgtgatcg gtaccgaggt
     1381 ttcacgcgcg acgcggagtg cggcgagaat gtcttcggcc gattcggcga gcacgacggc
     1441 gtcgggtgtc acaccctcgg cttccgattc gtcctcggcg taggccgcgc aagcgtctgc
     1501 gcccgtcacg accttcgacg gaccgagcgc ttgctcgagc aggagtcgag ccttgtcacg
     1561 cgccgcgttg gtcgggcggg gcacgtccgg gcgtccgagg agcacgcacg aagcttagcg
     1621 cgtacgccga cgctgcgtcg tttcacgccg gcccgcggcg gcgaagctcg gcttcgagct
     1681 cggcgatacg gcgcgcagcc gcttcccgtt cactgttccg gagctcgatt tccgcctctt
     1741 ccggcgtcgg ccatagcccc gagccgtccg cgccatccgc gaggcgcaac atcacgccga
     1801 gccgcggatc ctggtgcaag caccaatacg cttcgagctt gtcgcagtag cgcgcgttcg
     1861 gcgccgtgag ctcgcgttct accaggtcgc tctccaacca atcccaaagc ctgagcggac
     1921 gtttgcgatc ctcggggtcg aaatacacga gctcttccac cgcgcactgc cggtagcgct
     1981 cgagtcgtcg ctcgagctcg cgcgggccac cgtcggaggc gctgatgatc tcgacggcta
     2041 cttcaggcgc gccgtgtcgc caggtttgat acgacggcaa gagctcgtca ggcccgccga
     2101 gacgcacgaa ggcgtcgggc gcgaggcaca gcttgggatt ggtcgagtcc caatatacga
     2161 attggtcgga cccgacgtag gcacgtccgc gcagccgtcg ctcgaggatc aagaatagcg
     2221 ccgtgcgcag ccggaggtgg agcgccgatt caggcacttc ttcgtccgac gggaaaaaaa
     2281 tgggcacagg ctgccgcacg tattggtgcc ggagcggctt ttgcaggcgc gacgcggtca
     2341 cggctcgagg atagcacacg gcctgcatcg gtcgcccgcg ggcgccggtt gcgtgcgtgt
     2401 cactcggcgc gaacgatcgt cacttcacgt cgcagtccgc cgatcgcgag ctcgaacgcg
     2461 tcaccggcgc tcttgcccgt gatgccgcgg ccgagcggtg aggacggcgt gacgacgttg
     2521 atctcacctt gctcgtcggc gagcttgagt ccgccgcccg ccgggctcaa gagcacgcgt
     2581 tgtgccttgc cgtcgacatc gagctccacg agcgctccga cggcgagcgg ttcgttcgaa
     2641 gcgaagctgc gcgccgggat ttgtgagagt agggcgatgc ccgtctcgag ctccttggcg
     2701 cgcgcggctt gccccgcggc gaggtacgag agctcgatct tgcgcgtgtc cttgtcgttt
     2761 tccgggcgcg cttcggggtg attggctgcg tccgccgttt ctttggcggc gcggctcgcg
     2821 ctcgcgagct cgccctgcag ggcacgttct aattttgcga gcaggctttg cttgtccatc
     2881 gccgagaacg ccgaacagcg tgccgccgct tcattccggc gtccacttgg cttccccgaa
     2941 caggagtccc tggacgaaac cgatgcggta cgcgagaaag agaccgaagg cgaggctcag
     3001 cgcgcccgag gcgcgcgcga ggacgcgctc cgccgacgcg aagcgggcgg ctgcgatgcg
     3061 tagcggcact gcgagcagcg cggtgacgag catcatgctc gcgatcgtgc ccgcgccgaa
     3121 cacgacgaga tagacgagcg cagagcgtgc gtcgtgcacc gtc
//
LOCUS       DATIML010000603         3677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4163802, whole genome shotgun sequence.
ACCESSION   DATIML010000603 DATIML010000000
VERSION     DATIML010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4163802"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VLJ38_10365"
     CDS             complement(<1..521)
                     /locus_tag="VLJ38_10365"
                     /inference="COORDINATES: protein motif:HMM:NF012951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HSU39966.1"
                     /translation="MSTSNAAPAKVVGRLAPSPTGLLHLGHARTFLCAWWSARSQAGR
                     VLLRLEDLDGPRASGRFSDAAQRDLEWLGLDWDGAPSVQSEHLARFAHAVDALLATGK
                     AYACVCTRGDLRTAQNAPHAGDNEPRYPGTCRGRFASLAEAERASGRAPGVRLVVPPG
                     PVRIDDALAGPRS"
     gene            complement(518..889)
                     /locus_tag="VLJ38_10370"
     CDS             complement(518..889)
                     /locus_tag="VLJ38_10370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39967.1"
                     /translation="MRSAPGNAASAHANDLQTAQAELEHARIEFNRALAVRAPRPASG
                     GGAPAAASRGAADAAPPAKAEKKSAESSCATACRAFASLERAADAVCRITGEKDGRCS
                     HAHAVVSDAKQRVAVCTCTSE"
     gene            1238..1906
                     /locus_tag="VLJ38_10375"
     CDS             1238..1906
                     /locus_tag="VLJ38_10375"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSU39968.1"
                     /translation="MHATEPSFPLRGRPDRQYVRPPRPLIFPTSAEMPETGVHLDLRT
                     ALYLTVRYFVGERGAVGSEQYVYWDAEDPRRCLAPDLMVRMGATPGPFPVWKTWERGA
                     PHLAVEIVSQSDAPDAPWADKLRRYRAAGIAEVVRFDPLGRDCPLRLWDRIEDDLVER
                     ALVGQGAFFCDTLELYWCVRPHPVLGLELRLAKDAGGEQLVLSPDEAFKRVAELDAEL
                     GRRP"
     gene            complement(1919..3202)
                     /locus_tag="VLJ38_10380"
     CDS             complement(1919..3202)
                     /locus_tag="VLJ38_10380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39969.1"
                     /translation="MGRPHRFGPSLGAGLSGLALLAGACSRTEPTAHLVPSAVPVGSI
                     RSATSSISPSAAASGSDTSAPSPHAAPSRTTAEPTANVVEAKSTATLPGVTLGELFDV
                     GPAGPMAASSDGVVLLTKDDRVLLARKTAAGRADKLKIATLDAPQAAFFPVGRGPSVA
                     GGRAYWISHGRLVRRALGDEHELEVLNAAARDGSRTAAGEVRGTVAVAFLGRPDREGT
                     SHARLWLEGKEPLDLTPEGAGASSVALTRVGDHLLATTLDGRSAMTPMHARTVRVEPN
                     GATLGDDVVVWVGGPAQAWTETFVGAEGERAWAHVPIERDATHFGLASVELGAEPHLD
                     AAVAFFDYANGIDLAPVATAELCGRAYVAFVRPTASAPHSPEELVLTRQGENEAVTLA
                     NARGFAAVSLAPVPGGALLAYVADGRTWARGIGCK"
     gene            3327..>3677
                     /locus_tag="VLJ38_10385"
     CDS             3327..>3677
                     /locus_tag="VLJ38_10385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39970.1"
                     /translation="MRFPTPAETIALCALLTACAPPASSRSPNVSGNSPNAPPPPASG
                     VEAEPPVANAALPATAPSATPASSAAPGFAAPNTAPAPLGPSPTNERHGPPLPELSVK
                     SFGLHVGGSKDAGAR"
BASE COUNT          516 a         1304 c         1303 g          554 t
ORIGIN      
        1 aagctccggg gtcccgcgag ggcgtcgtcg atgcgcaccg gaccgggcgg gacgacgagg
       61 cgcacgccgg gcgcgcgacc gctcgcgcgc tctgcttccg cgagcgaggc gaagcggccg
      121 cggcaggtgc ccgggtagcg cggctcgtta tcgccggcgt gcggcgcgtt ctgcgcagtg
      181 cgtaaatcgc cgcgggtgca cacgcaggcg tacgccttgc ccgtcgcgag caacgcgtcc
      241 accgcgtgcg cgaaacgagc tagatgttcc gattggacgc tcggcgcacc gtcccagtcg
      301 aggccgagcc actcgaggtc gcgttgcgcg gcgtcgctga agcggccgct ggcgcgcggg
      361 ccgtcgaggt cctcgaggcg caagaggacg cggcctgcct gcgagcgggc gctccaccac
      421 gcgcagagaa acgtgcgcgc gtgcccgagg tgtaaaaggc cggtcgggct cggggcgaga
      481 cgcccgacga ccttcgcggg cgcagcgtta ctcgtgctca ttcgctcgtg caggtgcaga
      541 cggcgacgcg ctgcttcgcg tcggacacga cggcgtgcgc gtgcgagcaa cggccgtctt
      601 tttcacccgt gatgcggcag acggcatccg ccgcgcgctc gagcgacgcg aacgctcgac
      661 acgcggtcgc gcagctcgat tcggcggact ttttctcggc tttggccgga ggcgctgcgt
      721 ccgcggcgcc acgacttgca gctgccggcg cgcccccgcc gctcgctggc cgcggggctc
      781 gcacggcgag ggctcgattg aactcgatgc gcgcgtgctc gagctccgct tgagcggtct
      841 ggagatcgtt ggcgtgcgcc gaggccgcat tacccggcgc actgcgcatt tcttcgtcct
      901 cccgcggcgc cgtcgctcgg tcctggggtg aaagcgctcc cggctccgcc tcggctggcg
      961 ccgctgcggg agcgggcgcc gccggcgacg gaggaggtgg tgaggccgcg ggtgccgtcg
     1021 tcgcaggcgg ggcggcgtgg gaacatgcga cggtaacggc caacacccag agaagcttcc
     1081 cgctgccgcg cgcaccgaac tcaccgccgg tagtcatgcc cattgtcctc gccaggccat
     1141 tagacgtatc acgcagcgaa ttggctcaac acgcgaaagg cgagcaactc tcgctggcgg
     1201 ggggccgacc cgattggcgt ggtacaatct catgagcatg cacgcgaccg agccgtcctt
     1261 tccgctccgc gggcgccccg atcgccagta cgtacggccg ccccgtcccc tgatcttccc
     1321 gacgtcggcg gaaatgcctg agacgggcgt ccacctcgac ctgcgcacgg cactctattt
     1381 gacggtgcgt tacttcgtgg gcgagcgcgg ggccgttggc tcggaacaat acgtgtattg
     1441 ggatgcggaa gatccgcgtc gctgcttggc gcccgacttg atggttcgaa tgggcgcgac
     1501 accaggcccg tttccggtct ggaagacgtg ggaacgcggc gcgccgcacc tcgccgtcga
     1561 aatcgtcagc caatcggacg ctccggacgc gccgtgggca gacaagctcc ggcgctatcg
     1621 ggccgccggg atcgcggaag tcgttcgctt cgatcccctg ggtcgcgact gtccgctccg
     1681 gctctgggat cgaatcgaag acgatctggt cgaacgggcg ctcgtcggac aaggtgcgtt
     1741 cttctgcgac acgctcgagc tctattggtg cgtccgaccg catccggtgc tggggctcga
     1801 gctccgtctc gccaaggatg ccggaggcga gcagctcgtc ctttctcccg acgaagcgtt
     1861 caagcgcgtc gccgagctcg acgccgagct tggacgccgt ccctgaacga gctgcgggtc
     1921 acttgcaacc gatcccgcgc gcccacgttc gaccgtccgc gacataagcc agcagcgccc
     1981 cgcccggcac gggcgcaagt gatacggccg cgaaaccgcg tgcgttcgcg agcgtgacgg
     2041 cctcgttttc gccttgccgc gtcagcacga gctcctcggg tgaatgcggc gcgctcgccg
     2101 tgggccgcac gaacgcgacg tacgctcgcc cgcaaagctc cgccgtggcg acgggcgcca
     2161 ggtcgatccc gttcgcatag tcgaagaacg cgacagcggc gtccaagtgc ggttcggcgc
     2221 cgagctcgac gctcgcgagc ccgaagtgcg tcgcgtcgcg ctcgatcggc acgtgcgccc
     2281 aggcgcgctc gccttcggcg ccgacgaacg tctcggtcca agcctgcgcg gggccgccca
     2341 cccagacgac gacgtcgtcg ccgagcgtcg caccgttcgg ctcgacgcga acggtgcgag
     2401 cgtgcatggg cgtcatcgcg ctccggccgt cgagcgtggt cgcgagcagg tgatcgccga
     2461 cgcgcgtgag tgcgacgctg ctcgctccgg cgccctcggg cgtgaggtcg agcggttcct
     2521 tgccttcgag ccacaagcgc gcgtgcgacg tgccctcccg atcggggcgc cccagaaagg
     2581 ccacagcgac ggtgccacgc acctcgcccg ctgccgtgcg cgagccgtcg cgcgccgcag
     2641 cgttcaacac ttcgagctcg tgctcgtcac cgagcgcccg gcgcacgagt cgcccgtgcg
     2701 aaatccagta cgcgcgcccc ccggcgacgc tcggtccgcg tcctaccggg aaaaaagcgg
     2761 cttgcggcgc gtcgagcgtt gcgattttca gcttgtccgc ccgcccggcg gctgtcttcc
     2821 tcgcgagcag cacgcgatcg tctttggtga gcagcaccac cccgtcgctg ctcgccgcca
     2881 tcgggccggc ggggcctaca tcgaagagct ccccgagcgt cactcccggc agcgtcgccg
     2941 tactcttggc ttcgacgacg ttcgccgtgg gttcggctgt ggtccgcgag ggcgccgcat
     3001 ggggcgatgg tgcactcgtg tcactgccgg aagctgcggc gctcgggcta atcgaggagg
     3061 tggcggaccg gatgctccct acgggaaccg cgctcgggac gaggtgcgcg gtgggttcgg
     3121 tgcgggagca cgcgccggcc agcagcgcca agccagagag cccggcgccg agcgatgggc
     3181 cgaagcggtg cggtcggccc atgccggagg catagcgctc gggcgcggcc ggtgaaagcg
     3241 ctggctgggg cggatgtcca tgaaacggct gctccatgaa tctagctggt tgtcggcggt
     3301 cgtcaggacg cgctatctcg cggggcgtga gatttccgac cccggcggag accatagcgc
     3361 tttgcgcctt gctcacggcg tgcgccccgc cggcaagcag ccgatccccg aacgtcagcg
     3421 gcaactcccc gaatgcgcct ccgccgcccg cttccggggt cgaagccgaa ccgcccgtgg
     3481 ccaacgctgc gctgcccgca accgccccga gcgcgactcc ggcgagttcg gcagcgccgg
     3541 gcttcgcggc gccgaacacc gcgccggcac cgctcggtcc ctcaccgacg aacgaacgtc
     3601 acggcccgcc gttgcccgag ctcagcgtga agagcttcgg tttgcacgtc ggcggcagta
     3661 aggacgccgg cgcgcgg
//
LOCUS       DATIML010000604         5252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5323504, whole genome shotgun sequence.
ACCESSION   DATIML010000604 DATIML010000000
VERSION     DATIML010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5252
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5323504"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1087)
                     /locus_tag="VLJ38_10390"
     CDS             complement(<1..1087)
                     /locus_tag="VLJ38_10390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU39971.1"
                     /translation="MSHLGSRWISDWNPEDAAFWKSGGKRIATRNLIWSIVAENLGFS
                     IWLIWSVTAPRLNKAGFHYTTDELFTLVALPGLVGSLMRFPYTFAVPKFGGRNWTMVS
                     AALLFIPTLSLVFLVTRPDTPFWLMATAAATAGLGGGNFASSMSNISFFYPDREKGFA
                     LGLNAAGGNIGVSTVQLLVPILIATAWVNLSPEGAKPHQGPHLENAGLMWLPLIALAI
                     FGAYRFMDNLAAQRSSFKDQLVITRRKHTWIMAWLYIGTFGSFIGYSAAFPLLLKTQF
                     PHVTTNLAFLGALVGSVARPLGGKLADRIGGARITFVNFLIMGLATLGVIHFLGTQNF
                     AGFLAMFLVLFITTGVGNGSTFRMIPVI"
     gene            1401..2654
                     /locus_tag="VLJ38_10395"
     CDS             1401..2654
                     /locus_tag="VLJ38_10395"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HSU39972.1"
                     /translation="MPFFETLALLLTLTAAFAYVNHRWLRQPASVALMAMTLAASLAL
                     LAASELGLFRLGPMAVTLGRLQLDQTLLHGMLGALLFAGALHIRLDDLREHRLAVAVL
                     ALVGTVLSTFIVGGLVYVLVGLVGLPLGFLDCLLFGAVISPTDPVAVLGILKQAHVPH
                     GMRVQISGESLFNDGVAVVLFTTIVEFRTDSTHTVAGAFALFAREALGGALFGLVTGY
                     VVYRLLRSVDHYQTELLLTLALVLGGYAAAERLHVSAPLSAVVSGLVIGNHGRERGMS
                     QVTREQLDTFWALVDDILNAVLFVLVGLEVMIVSLSRQTLTASLIALPAVLVARWSSV
                     AVPILLMGRRRRFPQGTIRVLTWGGLRGGISVALALSLPLLPAKGVIVTMTYFTVIFS
                     IIVQGLTLGRVARRFGAESREAAPQ"
     gene            complement(2657..3436)
                     /locus_tag="VLJ38_10400"
     CDS             complement(2657..3436)
                     /locus_tag="VLJ38_10400"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU39973.1"
                     /translation="MTREVWMPNDAMERLQQVAALHDVFVRILGHELRTPLSSVVYAA
                     RMIAARPEDLQGTRRRADQIERTARALDRLIEHVLALAQASTEGALPLSCEPTDLDSL
                     VRRCLAELGPESSIRVSVAANGDTVGVWDHRRLAHVVSNLVTNALEHGEAGGLVRVEL
                     DGSDAARVRLSVHNRGTIAEEALGVLFEPFKARRRMSSGVGLGLYVVHCFVRAHWGDV
                     QVTSNAEHGTEFRVELPRTRADGAAADGAEPHSQERPRHDQ"
     gene            complement(3843..4025)
                     /locus_tag="VLJ38_10405"
     CDS             complement(3843..4025)
                     /locus_tag="VLJ38_10405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39974.1"
                     /translation="MSAISGDVNLAGKTVPKSQGWVSDDSDERAATARDDCPLAYLAV
                     FCAPGEFVGGSAAGRC"
     gene            4336..>5252
                     /locus_tag="VLJ38_10410"
     CDS             4336..>5252
                     /locus_tag="VLJ38_10410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39975.1"
                     /translation="MTIVLDVAIGITFLYLLLALLVTTVQELFASALRLRAQNLYAAL
                     DGMLKRDEQAAGKGANGTARDGKTLLAEVYAHPLIKNLRGKKLLSPSELALPSYIPSK
                     TFALALLDVLRRRSSLSAELGATKLLNGAREAVAGIDGHADLKHALELIFEQAEAKAM
                     RLDEEVELVTTGIETWFNDRMSRASGWYTRKAQLLGLVLALAVTAITNADSIRVVNAL
                     WHNGALREAAASTAQSFYDRSAARPAASAAAEAKPPSDIDPATVTKPAGADPLQALNL
                     SKLPIGWEGLAFTDPKPWPLRLLGWIITTL"
BASE COUNT          906 a         1720 c         1708 g          918 t
ORIGIN      
        1 agatgacggg gatcatgcgg aaggtggagc cgttgccgac gccggtcgtg atgaagagca
       61 cgaggaacat ggcgaggaag ccggcgaaat tctgggtgcc gaggaaatgg atcacgccga
      121 gagtcgcaag tcccatgatc aggaagttca cgaaggtgat gcgcgctccg ccgatgcggt
      181 cggcgagctt gccgccgagc gggcgagcga ccgagccgac gagggcgccg agaaaggcga
      241 ggttggtcgt cacgtgggga aactgcgtct tgagcagcag cgggaacgcg gccgaatacc
      301 cgatgaagga gccgaacgtg ccgatgtaga gccaggccat gatccaggtg tgcttgcgcc
      361 gcgtgatgac gagctgatcc ttgaagctcg aacgctgtgc cgcgaggttg tccatgaagc
      421 gatacgcgcc gaagatcgcg agcgcgatga gcggcagcca catgaggccg gcgttctcga
      481 ggtgcgggcc ttggtgcggc tttgcgcctt ccgggctcag gttcacccac gccgtagcga
      541 tcaggatcgg cacgagcagc tgaacggtgc tcacgccgat gttgccgccg gctgcgttca
      601 acccgagcgc gaagcccttc tcacgatcgg ggtagaagaa cgaaatgttc gacatgctcg
      661 acgcgaagtt gccgcccccg agcccggccg ttgccgccgc ggtagccatg agccaaaacg
      721 gcgtgtcggg tcgagtgacg aggaagacga gcgacagcgt cgggatgaag agcaaggccg
      781 cgctcaccat cgtccagttg cgtccgccga atttcggcac ggcgaacgtg taggggaagc
      841 gcatcagcga gccgacgagg cccggcagcg cgaccagcgt gaagagctcg tccgtcgtgt
      901 aatggaagcc cgccttgttc aggcgcggcg ccgtgacgct ccagatgagc catatcgaaa
      961 accccaggtt ttccgcgacg atggaccaaa tgagatttcg ggtggcgatg cgcttgcccc
     1021 cgctcttcca gaaggcggcg tcctcgggat tccaatccga aatccagcgt gatccaagat
     1081 gactcatggc gaaaaactct ccttgtgctg atgcggcgac tctctccata ttgaaaattg
     1141 gcgcagctcg tggcaacgcg aaatcgcggt gaaactgggt gtatttcggt ttctgttcga
     1201 tgtcagaaac gctccgctaa ccaagtgcac gaagccgaaa cgttcttggc tctgttagaa
     1261 acgttcccga aagcagcgac gcatgacgtt cgatccagaa acgagcccag ttgctcccct
     1321 cgggccgcgt cgaaacgcgc caaccgaccc tcgtgcgcgc ggccgaaacg aaaggtccgg
     1381 cgtctaggcg cagcgtcagc atgccgttct tcgagacgct cgcgctgctc ctcacgctca
     1441 ccgccgcgtt tgcgtacgtg aatcaccgct ggctgcgcca gccggcttcc gtggcgctca
     1501 tggccatgac gctcgcggcc tcactcgcgc tgctcgccgc ttccgagctc ggtttgttcc
     1561 ggctcgggcc catggcggtc acgctcggtc gacttcagct cgatcagacg ctcttgcacg
     1621 gcatgttggg tgcgctgctc ttcgcgggcg cgctccatat ccgcctcgac gacctgcgcg
     1681 agcaccgttt ggccgtagcg gtgctcgccc tggtcgggac cgtgctgtcg acgttcatcg
     1741 tcggcggcct cgtttacgtc cttgtagggc tcgtcgggct gccgctcgga tttctcgact
     1801 gcctgctgtt cggcgccgtg atctcaccga ccgaccccgt ggccgtgctc gggatcctga
     1861 agcaggcgca cgtgccgcac ggtatgcgcg tgcagatcag cggcgaatcg ttgttcaacg
     1921 acggcgtggc cgtcgtgctc ttcacgacca tcgtcgaatt taggacggac agcacgcaca
     1981 ccgtggccgg agcgttcgcc ctcttcgcgc gcgaggcgct cggcggcgcc ctgttcggcc
     2041 tcgtcacggg ctacgtcgtg taccggctcc tccgcagcgt ggatcactat caaaccgagc
     2101 tgcttctcac gctggcgctc gtgctcggag gttacgctgc agccgaacgc ctgcacgtct
     2161 ccgctcccct ctcggccgtg gtctccggcc tcgtgatcgg caatcacggc cgcgagcgcg
     2221 ggatgtcgca ggtgacgcgc gagcagctcg atacgttctg ggcgctcgtg gacgacatcc
     2281 tcaacgcggt gctgttcgtt ctcgtggggc tcgaggtcat gatcgtcagc ctctcgcgac
     2341 agacgctgac ggccagcctg atcgcgctac cggcggtgct cgtcgcgcgc tggtcgagcg
     2401 tcgccgtgcc cattttgctg atggggcgcc gccgccgttt tccgcaaggc acgattcgcg
     2461 tcctcacgtg gggcgggctg cgcgggggga tctcggtggc cctcgcgctg tccctgccgt
     2521 tgctccccgc caaaggtgtc atcgtgacga tgacgtattt taccgtcatc ttttcgatca
     2581 tcgtgcaggg cctcacgctt ggacgcgtgg cgcgacgttt cggcgccgag agccgcgaag
     2641 cggccccaca gtagcgctat tgatcgtggc gggggcgctc ctgggagtgg ggctccgcgc
     2701 cgtccgcggc tgcgccgtcc gcccgggttc gcggcaattc cacgcgaaac tcggtgccgt
     2761 gctccgcgtt cgacgtgacc tgaacgtcac cccagtgcgc gcgcacgaag caatggacca
     2821 cgtacaggcc taggccgact ccgctcgaca tgcgccggcg cgccttgaac ggctcgaaca
     2881 acacgccgag cgcctcctcg gcgatagtgc cgcggttatg caccgacagc cgcacgcgag
     2941 cggcgtcgct cccgtcgagc tcgacgcgca cgagtccccc ggcttcgccg tgctcgagcg
     3001 cattcgtcac gagattactg acgacgtgcg cgagccgccg atggtcccaa acgcccaccg
     3061 tgtcgccgtt cgccgcgacg ctgacgcgaa tggaagattc cggaccgagc tcggcgaggc
     3121 agcgccgcac gagcgagtcg agatccgtcg gctcgcacga gagcgggagc gcgccttcgg
     3181 tgctcgcctg ggcgagggcg agcacgtgct cgatcaagcg atcgagcgcg cgcgccgtgc
     3241 gttcgatttg atcggcgcga cggcgcgtgc cctgaagatc ctcggggcgc gccgcgatca
     3301 tgcgagccgc gtagacgacg ctgctgagcg gcgtcctcag ctcgtggccc aagattctca
     3361 cgaaaacgtc gtgcaacgca gccacctgct ggaggcgctc catcgcgtcg ttcggcatcc
     3421 acacttcacg cgtcatggct accccttcct acgaccaaca tgagcctacg accaacatga
     3481 ggactccctg agagcgtttg gcgcaaccca tcttggccac cgtcttttag tgcgcaagac
     3541 accccgttgt gaagactcga gcttcgcagg cagacgactt gtcgtggcga aaacgcacga
     3601 gcgtccaagg aaagagcgac acgctgcctt tgaatcgggg ccggcgactt tcggggaatg
     3661 atgggcgcat gtcgatggtt cagcacgact cggccgctcc ttcttgaaag ctcgtttcgg
     3721 gatcggccgc tgacgaaccg cgcaaacgcg ccgaggccgc caacggcgat gagctcacgt
     3781 agtttccggc catcacggca gcagggcagc aaatgtcgtg ccgacggcct gggtgtcatc
     3841 gctcagcagc ggccagcagc gctcccgcca acgaattcgc ccggagcgca gaacacggcc
     3901 aagtacgcga gaggacagtc gtctcgcgcg gtcgcagctc gctcgtcgct gtcgtcgctg
     3961 acccagccct ggctcttcgg cacggtcttg cccgcgaggt tcacgtcgcc gctgatagcg
     4021 ctcacttccg tcgcgccggt gctgtcgatg aaactaatct tctcgaagcg ctgccgaatc
     4081 gtttgacggc ggcgatgtcg ctcacggtcg ggaacccgaa catgaaagcc tcctgagtcg
     4141 ctccggcgcc cggaacgagc tcttgcgagc gagccgtccg cgatagacga gagcgagtcc
     4201 cgcttgcgtg gcgagcgcga aaactcgtgg tgaaaggcgg ctcaagacgc cgactggagc
     4261 aagtgactat ggcgccgccg gcccggcgcg ggctaggagt caaagggctg ctttgccggc
     4321 ccaaggggaa gacagatgac gatcgtcctc gacgtcgcga ttggaatcac gttcctgtac
     4381 ctgctgctcg ccctgctcgt caccacggtg caggagctct tcgcctcggc gctccgcttg
     4441 cgtgcgcaaa acttgtatgc agcgctcgac gggatgctga aacgtgacga gcaggctgca
     4501 ggcaagggcg ccaacggcac ggcgcgcgac ggcaagacgc tgctcgcgga ggtttacgcg
     4561 catcccttga tcaagaattt gcgcggcaaa aagctgctga gtccaagcga gctcgccctg
     4621 ccgtcctaca ttccgagcaa gaccttcgcg ctggcgcttc tcgacgtgct ccgccgacgt
     4681 agctcgctct cggctgagct cggggccacg aagctcttga acggcgcccg tgaggcggtt
     4741 gcggggatcg acggccacgc cgacttgaag cacgccctcg agctcatttt cgagcaagcg
     4801 gaggcgaagg cgatgcgcct cgacgaggaa gtggagctcg tcacgaccgg catcgagacg
     4861 tggttcaacg accgcatgtc gcgcgcttcg ggctggtaca cgcgcaaggc gcaactgctc
     4921 ggtctcgtgc tcgcgctcgc cgtgacggcg atcacgaacg ccgattccat ccgtgtcgtg
     4981 aatgcgctct ggcacaacgg ggcattacgc gaggcagccg cgtcgacggc gcagtcgttt
     5041 tacgatcgtt ccgcggcgcg acccgccgct agcgccgccg ccgaggccaa gccgccgagc
     5101 gacattgacc cggcgaccgt caccaagccc gccggggccg acccgttgca agcactcaac
     5161 ctctcgaaac tgccaatcgg ctgggaaggc ctcgcgttca cggacccgaa accgtggccg
     5221 ctccgcctgc tcggatggat catcacgacg ct
//
LOCUS       DATIML010000605         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5034425, whole genome shotgun sequence.
ACCESSION   DATIML010000605 DATIML010000000
VERSION     DATIML010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5034425"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..909
                     /locus_tag="VLJ38_10415"
     CDS             <1..909
                     /locus_tag="VLJ38_10415"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSU39976.1"
                     /translation="DGEAPEALLANAEAALKKAKASGQSYVFYAPVMNARVSEQLALE
                     TKLRRAVEREEFLLHYQPKIELKTGVIVGLEALIRWRDPESGLVPPGKFIPLLEETGL
                     IGEVGRWVLERAALQYHEWVAAGHAPPRIAVNVSGLQLAAKDFVSKLERVLMHYPDGA
                     SGIDLEITESVFVDDLDGSIEKLAAARRHGLTVAMDDFGTGYSSLSSLGRLPLDSLKV
                     DRSFVHRMTEDAQSTSIVTTIISLGHALDLKVVAEGVETAEQARLLRLLKCDQAQGYL
                     IARPKPAEEIVPLLGTRIDFNAPPRA"
     gene            complement(887..>1519)
                     /locus_tag="VLJ38_10420"
     CDS             complement(887..>1519)
                     /locus_tag="VLJ38_10420"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU39977.1"
                     /translation="TAEQCLREVEERVDSAALAHAEKAWARARERLGGMRLGLERMRE
                     LVVKLRTFSRLDEGETKQVSIRESVDSVLTILGHRLGAHVAVECRIGDPDVIECMPGL
                     LNQALMNLVTNAIDAVAGDGRIVIGAQVEDDAYVIRVEDSGPGIPRELRQRVLEPFFT
                     TKPVGQGTGLGLSITYSIVKKHGGSLELTDAPSGGAAVIVRLPLKLAVAR"
BASE COUNT          239 a          501 c          522 g          257 t
ORIGIN      
        1 gacggcgagg ctcccgaggc gctgctcgcg aacgcagaag ccgcgctcaa gaaagcgaag
       61 gcgagcggtc agtcgtacgt cttctacgcg cccgtcatga acgctcgcgt ctcggagcaa
      121 ctcgcgctcg agaccaagct ccgccgcgcc gtcgagcgcg aggagttctt gctgcattat
      181 cagccgaaga tcgagttgaa gaccggcgtg atcgtggggc tcgaagcgct cattcgctgg
      241 cgcgatcccg agtctgggct cgtcccgccg ggcaaattca tcccactgct cgaggagacc
      301 gggctcatcg gcgaggtggg gcgctgggtg ctcgaacgcg ccgcgctcca gtatcacgag
      361 tgggtggcag ccggtcatgc cccgccgcgc atcgccgtca acgtgtcggg cctgcaactt
      421 gcagccaagg atttcgtctc gaagctcgag cgagtgctga tgcactaccc ggacggcgcg
      481 tcgggcatcg acctcgagat caccgagagc gtgttcgtcg acgacctcga cggcagcatc
      541 gaaaagctcg cggcggcgcg ccggcacggt ctcaccgtcg cgatggacga tttcggcacg
      601 ggctactcgt ccttgagttc gctcggtcgc ctgccgctcg attcgctgaa ggtcgatcgc
      661 tcgttcgtgc accggatgac cgaagacgcg cagagcacct cgatcgtgac gacgatcatc
      721 tcgctcgggc acgctctcga cctcaaggtc gtggccgagg gcgtcgaaac ggcggagcag
      781 gcccggctcc tgcggttgct caagtgcgac caggcccagg gctatttgat cgcccggccc
      841 aagcccgccg aggagatcgt gccgctgctc gggacgcgca tcgatttcaa cgcgccaccg
      901 cgagcttgag cggcagccgc acgatgacgg ccgcgccgcc gctcggcgcg tccgtgagct
      961 cgaggctgcc gccatgcttc ttgacgatgg agtaggtgat cgagaggccg agccccgtgc
     1021 cttgcccgac cggcttggtg gtgaagaacg gctcgagcac gcgctgcctg agctcgcgcg
     1081 gaatgccggg gccgctatct tcgacgcgga tgacgtaggc gtcgtcttcg acttgggcgc
     1141 cgatgacgat gcggccgtcg ccggcgaccg cgtcgatggc gttggtgacg aggttcatca
     1201 gcgcctgatt caagaggccc ggcatgcact cgatcacgtc cgggtcgccg atgcggcatt
     1261 cgacggcgac gtgcgcgccg agccggtgac cgaggatcgt gagcacggag tcgacgctct
     1321 cgcggatgct cacttgcttg gtttcgccct cgtccaggcg cgagaaggtg cgaagcttga
     1381 cgacgagctc gcgcatgcgc tcgaggccga gccgcatgcc accgaggcgt tcgcgcgccc
     1441 gtgcccaggc cttttcggcg tgtgcgagcg cggcggagtc cacgcgctct tcgacttcgc
     1501 gcaggcattg ctcggccgt
//
LOCUS       DATIML010000606         1635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5034550, whole genome shotgun sequence.
ACCESSION   DATIML010000606 DATIML010000000
VERSION     DATIML010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5034550"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..1135)
                     /gene="hrcA"
                     /locus_tag="VLJ38_10425"
     CDS             complement(44..1135)
                     /gene="hrcA"
                     /locus_tag="VLJ38_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020464723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HSU39978.1"
                     /translation="MHRPAKMKVLNPLSKRARSVLYAVVTEFIASGEPVGSRLISKKY
                     AFSLSPATIRNVLADLEDEGYLAQPHTSAGRVPTERAFRLFVDALMQVRKLPDNDAGR
                     INEWLEDLSPDADILRETGKLLADLSKAPAVILRARAETRTLLKLRFIVTRPGEMLAV
                     AVFLDGTVENRFIRVETPISEADLERLHGMLEEVTPGRTLPALRDAIHQGLSERRAEL
                     GVLHDLGYELVRSTAEGAPRIADVVIEGQSLLLDRPEFGSVDRMRELLLALDDRQRLV
                     GLLDRALVTDRVQVFLGEETGSGLGYPVSLVAARYQERGEPGGAVGVIGPTRMDYPFV
                     VPLVAAAAEAMSAAIARSQEPRDPNKSSG"
     gene            1209..>1635
                     /locus_tag="VLJ38_10430"
     CDS             1209..>1635
                     /locus_tag="VLJ38_10430"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39979.1"
                     /translation="MITRRPGTFLGAPLTTTLLAVDDSKTMRKVLEITFSGEDFRLLL
                     CGSGAEALGKLSERPSVALVDAGLDGASGYELCQKLKAAQPGLGVIILSSKQQPYDRA
                     LGGQFGADDFADKPFDTQQLIDKVIALSKKSAGAAAPAPA"
BASE COUNT          287 a          543 c          554 g          251 t
ORIGIN      
        1 gcagtgcggc acggcggtcg cccaaaccaa caaaacctcg aactcagccg gacgacttgt
       61 tcggatcgcg cggctcttgg ctccgcgcaa tcgcggcgct catcgcttcg gccgccgctg
      121 cgacgagcgg aacgacgaac ggatagtcca tgcgcgtcgg gccgatcacg ccgacggcgc
      181 cgcccggctc gccgcgctcc tggtagcgcg ccgcgacgag gctcacgggg tagcccaggc
      241 cggagcccgt ttcctccccc aaaaacacct gcacgcgatc ggtcacgagc gcgcgatcga
      301 gtagccccac gagccgctgc cgatcgtcga gcgcgagcag cagctcgcgc atgcggtcga
      361 cgctgccgaa ctcgggccgg tcgaggagca gcgattgccc ctcgatcacg acgtcggcga
      421 tgcgcggcgc gccttcggcg gtcgaacgca cgagctcgta gccgaggtcg tgcagcacgc
      481 cgagctcggc gcggcgttcg ctcaggccct ggtggatggc gtcgcgcagg gcgggcagcg
      541 tgcggcccgg cgtcacctct tcgagcatgc cgtgcaaacg ttcgagatcc gcttccgaga
      601 tgggcgtctc gacacggatg aaccgatttt cgacggtgcc gtccaagaac accgcgacgg
      661 cgagcatctc gcccgggcgg gtgacgatga agcgcagctt caagagcgtg cgggtctcgg
      721 cgcgcgcgcg caaaatcacg gcgggcgcct tgctcaagtc ggcgagcaac ttgccggtct
      781 cgcgcaagat gtcggcgtcg gggctcaggt cctcgagcca ctcgttgatg cggccggcgt
      841 cgttgtccgg gagctttcgc acctgcatga gcgcgtcgac gaagagccgg aaggcgcgct
      901 ccgtcgggac gcggccggcc gaggtgtgcg gctgcgcgag gtacccctcg tcctcgagat
      961 cggcgaggac attgcggatc gtcgccgggg agagtgaaaa cgcgtacttc ttactgatga
     1021 gccgactacc gaccggctcg ccggaagcga tgaattccgt cacgacggcg tagaggacgg
     1081 agcgggctct cttcgagagg gggttcaaca ccttcatttt ggccgggcga tgcacccaag
     1141 gtcaaacggc actcaaataa gtgggcgtag cctcggcgaa atccttgaca gggttggaag
     1201 cggccctgat gatcacacgc cgtccgggta cctttttggg agcacctttg accacgaccc
     1261 tgttggccgt cgacgacagc aagacgatga ggaaggtgct ggaaatcacc ttctctgggg
     1321 aggacttccg actgctgctc tgcggtagcg gggccgaagc gctgggcaag ctctccgagc
     1381 ggccgagcgt cgccctcgta gacgccgggc tcgacggagc gagcggctac gagctctgcc
     1441 agaagctcaa agccgctcag cccggcctcg gcgtcatcat cctctcgagc aagcaacaac
     1501 cttacgaccg ggcgctcggc ggccagttcg gtgcggacga tttcgccgac aagccgttcg
     1561 acacccagca gctcatcgac aaggtcatcg ccctgtctaa gaagagcgcc ggcgccgcgg
     1621 caccagcgcc tgcgc
//
LOCUS       DATIML010000607         2623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3874275, whole genome shotgun sequence.
ACCESSION   DATIML010000607 DATIML010000000
VERSION     DATIML010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3874275"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VLJ38_10435"
     CDS             complement(<1..543)
                     /locus_tag="VLJ38_10435"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39980.1"
                     /translation="MPIDASVVFVVDDDISVRESLDSLIRSAGFGVESFASARAFLAR
                     RRSDVASCLVLDVSLPDLSGLDLQERLSNDKSKLPIIFLTGYGDVPMTVRAMKAGAVE
                     FLTKPFEPEALLDAIRAALGRSAAALAEDGERRALRDRHALLSDREREVMALVVSGLL
                     NKQVGGELGISEITVKAHRGR"
     gene            complement(533..967)
                     /locus_tag="VLJ38_10440"
     CDS             complement(533..967)
                     /locus_tag="VLJ38_10440"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU39981.1"
                     /translation="MIRTKQPKHDPASGRVDARPLVSVVDDDESVRESLPDLLRELGY
                     SVRAFASAEEFLECPELARVHCLILDVSMPGMSGPELQRELSQSGRQMPTIFITAQVD
                     ATLRPALLAQGATECLFKPFSEAELVTALKAATGALATDHAD"
     gene            1107..2480
                     /locus_tag="VLJ38_10445"
     CDS             1107..2480
                     /locus_tag="VLJ38_10445"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU39982.1"
                     /translation="MSDIDPIVCVIDDDVSVREAIVGLVRSAGIEVRAYTSAQEYLSA
                     ERGLPVGCLVLDVKLPGVTGLELQELLGRDREQVPIVFVSGQSDVPMSVRALKAGALD
                     FLTKPFDPDALLDAIRAGIAVASRAGVRAVRAGDASSLGIVGQSRALDAALAEVRIVA
                     STDSTVLVYGETGTGKELVARAIHDLSERRQGPFVKVNCGAIPTGLLESELMGHEKGA
                     FTGAIAQRIGRFELAHGGTLFLDEIGEIALELQPKLLRLLQEREFERVGGTRTVRSNV
                     RVLAATNRDLQAMVRQRTFREDLYYRLNVFPITLPPLRTRRQDIPALVDHFVTQSAKR
                     LKKEIPVVTANAMQHLQRYNWPGNVRELENVVERAMILARGPALEFPPLYNAALAEHD
                     EEAGDDLAAVNKAHILGVLEATGWIVAGPHGAAARLGVKRSTLNYRMKKLGIPSVRHR
                     ARGFDAD"
BASE COUNT          470 a          862 c          855 g          436 t
ORIGIN      
        1 cctgccgcga tgagctttga ccgtgatctc actgatgcca agttctccgc ccacttgttt
       61 attgagtagg ccggacacga ccagcgccat gacctcccgc tcacggtcgc tcagcaacgc
      121 atgccggtcg cgcagcgcgc gccgctcgcc gtcctctgcc aacgccgcgg cgctccgccc
      181 gagcgccgcc cgaatcgcgt cgagcaaggc ttcgggctcg aagggcttcg tcaggaattc
      241 cacggccccg gccttcatgg ctcgaaccgt catcggcacg tcgccgtacc cggtgagaaa
      301 gatgattgga agcttagact tgtcgttcga caggcgctcc tgcaagtcga gaccactcag
      361 atcgggaagc gacacgtcga gcacgaggca cgacgcaacg tccgagcgtc gccgtgcaag
      421 aaatgctcgg gccgacgcga aactctcgac gccgaagccg gccgagcgga tcagcgagtc
      481 gagcgactcg cgcaccgaga tgtcgtcgtc cacgacgaaa acgacggacg cgtcaatcgg
      541 catgatcggt tgctagcgca cccgtcgctg ccttcaaggc tgtgacgagc tccgcctccg
      601 agaacggctt gaacaggcat tccgtcgcgc cttgcgcaag taaagcgggg cgcagcgtcg
      661 cgtcgacctg agcagtgatg aagatcgtgg gcatctgacg gccgctttgg ctgagctcgc
      721 gttggagctc gggaccggac atgcccggca tgctgacatc gagaatcagg caatgcacgc
      781 gagcgagctc cggacactcg agaaattcct ccgcggacgc aaacgctcga accgagtagc
      841 cgagctcccg gagcaggtcg ggcagcgact cgcgcaccga ctcgtcgtcg tcgacgacgg
      901 aaacgagcgg gcgagcgtcg acgcgtccgc tcgcagggtc gtgctttggc tgcttggtgc
      961 ggatcacggg cacctagaag tacgcctggg ccttccgagc tcgccatcat actttggtat
     1021 cgggcgcacg cctccacgag accttcgtac aatatgactt ctcggcgcgg tcgagcatcc
     1081 ttcacgcaac ccgaaggact gctgccatgt ccgacataga tccgattgtt tgcgtcatcg
     1141 acgacgacgt ctcggttcgt gaggccatcg tcgggctcgt gcgctcggcc ggcatcgagg
     1201 tcagagccta cacgtccgcg caggagtact tgtccgccga acgcgggctg ccggtcggtt
     1261 gtttggtgct ggacgtgaag ctgccgggcg tgaccgggct cgagctccaa gagctgctcg
     1321 gccgcgatcg cgagcaagtc ccgatcgtgt tcgtgagcgg gcagagcgac gtgccgatgt
     1381 cggtgcgagc gttaaaggcg ggcgcgctgg attttctgac caagccgttc gatccggacg
     1441 cgctactcga cgcgatccgc gcgggcatcg ccgtggcgag ccgtgcaggc gtgagggccg
     1501 ttcgcgccgg cgacgcttcc tcgctcggta tcgtcggcca gagcagagcg ctcgacgctg
     1561 cgctcgcgga agtgcgcatc gtggcgagca cggattcgac cgtcctcgtg tacggcgaga
     1621 ccggtaccgg caaggagctc gtcgcgcggg cgattcacga cttgagcgag cggcgtcagg
     1681 gccccttcgt caaggtcaat tgcggcgcga tcccgaccgg cctgctcgag agcgagctca
     1741 tggggcacga gaagggcgcc ttcacgggcg ccatcgcgca gcgtatcggt cgcttcgagc
     1801 tcgcccacgg cggcacgctg ttcctcgacg aaatcggaga aattgcgctc gagctgcagc
     1861 ccaagctcct gcggctgctc caggaacgag agttcgagcg cgtcggcggc acgcgcacgg
     1921 tgcgctcgaa cgtgcgcgtg ctcgccgcca cgaaccgaga cctccaagcg atggtgaggc
     1981 aacggacctt ccgggaagat ctctactacc ggctgaatgt gtttccgatc acgctgccgc
     2041 cgctccggac gcgacggcaa gacatcccag cgttggtcga tcacttcgtg actcagagcg
     2101 ccaagcgact gaaaaaggag atcccggtag tgacggccaa cgcgatgcag cacttgcaac
     2161 gctacaactg gcccggcaac gtgcgcgagc tcgagaacgt cgtcgagcgc gccatgatcc
     2221 tcgcacgtgg gccggcgctc gagtttccgc cgctctacaa cgccgcgttg gccgagcacg
     2281 acgaagaggc cggcgatgac ctcgccgccg tcaacaaagc ccacattctg ggcgtgctcg
     2341 aggcgactgg gtggatcgtc gcgggcccgc acggcgccgc cgcccgcctc ggcgtcaagc
     2401 gctccacgct gaactaccgg atgaagaagc tcggcattcc ctccgtgcgt caccgcgcgc
     2461 gtgggttcga cgcggattga tacccgcgct tcttcgcgca cgcgatcggc gaagtcgata
     2521 cctaccgagc gctgacgacg gttgagcatt ctgccgaagc ctcggctcgt tcggctgcga
     2581 aacgagtgat tcgagccgct ctttgccaga accaggggag gtc
//
LOCUS       DATIML010000608         3309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_412254, whole genome shotgun sequence.
ACCESSION   DATIML010000608 DATIML010000000
VERSION     DATIML010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3309
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412254"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1434
                     /locus_tag="VLJ38_10450"
     CDS             <1..1434
                     /locus_tag="VLJ38_10450"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU39983.1"
                     /translation="VTFMLPNNFSLTEGRKLTPRLKEIIERTPEVTEVLSQLGRPEDG
                     TDTKLPNNLEVFIRLKPMAEWRHEKPTLDALVDEMSKNLREVPGIDYNFSQPIRDNVE
                     ENISGQKGQVALKIYGEDLDKLVQAAEIAKDTVAKIPGAVDVGITKSGTSPQISVKLD
                     RMALARFDMDLGDVQNYVETAVGGHVASEIWEGERRFDVTVRLPPATREDVTALARMP
                     LPLKDGSLLPLSALASVGMGTGRAAITRENGRRYVGVRMNVRNRDLGSFVAEAQRKVK
                     SALHLPEGYELTWGGEFENQQRAMARLELVIPLALMITFLLLFSAFNSLFDAAIILLN
                     VPLALLGGVVALAVVRMPLSVSAAVGFIALLGQAVLNGVLVVAAIRARLEAGEAPFDA
                     VFNGTRERLRAVLVTALLASLGLLPAALSHAIGSETQRPIAVVVVGGTISAALLTLVV
                     LPVTYYAACYLRQRLKLGRPLSPEPAE"
     gene            1622..2335
                     /locus_tag="VLJ38_10455"
     CDS             1622..2335
                     /locus_tag="VLJ38_10455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39984.1"
                     /translation="MRRTAFVPKLALGTVVACVVPSQLAACGGESDDDSGHAGGAGKG
                     GSGTGGSGGTTGGTGASAGRGGTGAGGSGGTSATGGGGGRNGTGGSFGTGGFFVLAMG
                     AFGGTGGSSAGNGGSGGKAGSAGGGGVAGRAAMGGRGGASGRGGASGRGNFGTGGFIS
                     LAIGAFGGGGADGGTSAGRSNNGGRAGGGASGASPGGASPGGASPGGASAGGAAGTTG
                     RGGNFFVLAINAFSGRGGA"
     gene            2332..3186
                     /locus_tag="VLJ38_10460"
     CDS             2332..3186
                     /locus_tag="VLJ38_10460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSU39985.1"
                     /translation="MTFGAVEVRRTRSKTALARHHERALRGELVRVAKPIAWDDFDRS
                     RYPEPALALAEDLFTKLAMGEYSAVGLFAQITSGLALTGAPLDIVAASTRVGSDEIRH
                     AEYCLRMAELCAGKPVAVTIDHDALAASVPEATSLANVDFLVFKYAAIGETLAAALLT
                     ECRRRATDPVAKALYGSLVADEVHHARLGWYYAAHRAPLFTLSERQELADRVAEFVML
                     LEEEFWMGRDAPASARGAAKALGVLDSETQRRVIAEVVEGEILGALDEVGLGTSLAWR
                     ARRRPERA"
BASE COUNT          491 a         1116 c         1199 g          503 t
ORIGIN      
        1 gtcaccttca tgctgccgaa caacttctcg ctgacggagg ggcgcaagct cacgccgcgg
       61 ctgaaggaga tcatcgagcg cacgccggaa gtgacggagg tgctctcgca gctcggtcga
      121 cccgaggacg gcaccgacac gaagctgccg aacaacctcg aagtcttcat tcgcctgaag
      181 ccgatggcag agtggcggca cgaaaagccg acgctcgacg cgctggtcga cgagatgtcg
      241 aagaacctgc gcgaggtgcc gggcatcgac tacaacttct cgcagccgat ccgcgacaac
      301 gtcgaggaga acatctcggg ccaaaagggc caggtcgcgc tcaaaattta cggcgaggat
      361 ctcgacaagc tcgtgcaggc ggccgaaatc gcgaaggaca ccgtcgccaa gatcccgggt
      421 gcggtcgacg tcgggatcac caaatccggc acgtcaccgc agatctcggt gaagctcgac
      481 cgcatggcgc tcgcgcgctt cgacatggat ttgggcgacg tccaaaacta cgtcgagacg
      541 gccgtgggcg gtcacgtcgc gagcgagatc tgggagggag agcggcgctt cgacgtgacg
      601 gtgcgcctgc cgcccgcgac gcgcgaggac gtgacggcgc tcgcgcgcat gccgttgccg
      661 ctcaaggacg gttcgctcct gccgctctcc gcgctcgcgt cggtcggcat gggcacgggc
      721 cgcgcggcga tcacgcgcga gaacgggcgc cgctacgtcg gcgtgcgcat gaacgtcaga
      781 aaccgcgact tgggctcgtt cgtcgccgag gcgcagcgca aagtcaaaag cgctctccat
      841 ttgcccgaag gctacgagct cacgtggggc ggcgaattcg agaaccaaca gcgcgccatg
      901 gcgcggctcg agctcgtgat cccgctcgcg ctcatgatca cgttcctgct cttgttctcg
      961 gcgttcaact cgctgttcga cgccgcgatc attttgctca acgtgccgct cgcgctgctc
     1021 ggcggcgtgg tcgcgctcgc ggtcgtccgc atgccgctct ccgtgtcggc ggcggtcggc
     1081 ttcattgcct tgctcggcca agcggtgctg aacggcgtgc tcgtcgtcgc ggccattcgc
     1141 gcgcggctcg aagcggggga ggcgccgttc gacgccgtct tcaacggcac gcgcgagcgt
     1201 ttgcgcgccg tgctcgtgac ggcgttgctc gcctcgctcg ggttgctccc ggcggcgctg
     1261 tcgcacgcga tcggcagcga aacgcagcgg cccatcgcag tcgtcgtcgt gggcggcacg
     1321 atttcggcgg cgctgctcac cctcgtcgtg ttgccggtga cgtattacgc ggcgtgctac
     1381 ctaaggcagc gcctgaagct cgggcgtccg ctgagcccgg aaccggccga gtgagctcga
     1441 acgcagtcga acgcgaccgg cggctgcact gaacgagcgc tgaatccggc aaatgcgaca
     1501 ccctcgcctc cgtgcggggg ccgggcgccc cgcttccgct aggtatcgac gaagccgcgc
     1561 tgcgccgcaa cctggccgag ttgcgtcccg cggtgtaaaa cgaggtctgg gagaggtgat
     1621 catgcgacga accgctttcg ttcccaagtt ggcactcggc acggtcgtgg cgtgcgtggt
     1681 cccgtctcag ctcgccgcgt gcggcggtga atccgacgac gacagcgggc acgctggcgg
     1741 cgccggcaaa ggcggcagcg ggacaggcgg tagcggtggc acgacgggcg gcaccggcgc
     1801 cagcgccgga cgcggcggca ccggcgcggg cggtagcggc ggaaccagtg ccacgggcgg
     1861 tggcggcggc cgcaacggca ccggcggcag cttcggcacg ggcggcttct tcgtgctcgc
     1921 gatgggcgca ttcggcggca cgggcgggag ctcggctgga aacggagggt cgggcggcaa
     1981 agccggctcg gctggcggcg gtggggtagc tgggcgcgcg gcgatgggcg gccgcggagg
     2041 cgcgagcggc cgcggaggtg cgagcggccg cggaaacttc ggcacgggcg gcttcatctc
     2101 gctcgcgatt ggagcattcg gcggcggcgg cgcggacggc ggcacgagcg ccggtcgcag
     2161 caataacggc ggtcgcgcgg gcggcggcgc gagcggcgcc tcacccggcg gagcgtcacc
     2221 cggcggagcg tcaccgggcg gagcctcagc gggcggagcg gctggcacga ccgggcgcgg
     2281 tggtaacttc ttcgtgctcg ccatcaacgc attcagcggc cggggcggcg cttgaccttc
     2341 ggcgccgtcg aggtccggcg cacgcgcagc aagaccgctc tggcgcggca tcacgagcgg
     2401 gcgctccgcg gtgagctcgt tcgtgtcgcc aagccgattg cctgggatga tttcgatcgc
     2461 tcgcgctacc cggagccggc gctcgcgctc gccgaggatt tgttcaccaa actcgccatg
     2521 ggtgagtaca gcgccgtcgg cttgttcgcc cagatcacgt cgggtctcgc gctcacgggc
     2581 gcgccgctcg acatcgtcgc ggcatcgacg cgcgtcggca gcgacgaaat tcggcatgcc
     2641 gagtattgcc tgcgcatggc cgagctctgc gccggcaagc ccgtggccgt cacgatcgat
     2701 cacgacgcgc tcgccgcgag cgtgccggag gcgacgagcc tcgcgaacgt cgattttctg
     2761 gtgttcaagt acgcggccat cggcgagacg ctcgccgcag cgctgctcac ggaatgccgc
     2821 cgccgcgcga ccgatccggt cgcgaaggcg ctctacggct cgctcgtcgc cgacgaggtc
     2881 caccacgccc gtctcggctg gtactacgcg gcccatcgcg cgccgctctt cacgttgtcc
     2941 gagcggcaag agctcgccga tcgcgtcgcc gagttcgtga tgctgctcga agaagagttt
     3001 tggatgggcc gcgatgcgcc cgcttcggcg cgcggcgccg cgaaagcgct cggcgtgctc
     3061 gattccgaaa ctcagcgccg cgtgatcgcc gaagtcgtcg agggtgaaat cctcggcgcc
     3121 ctggatgagg tcgggctcgg cacctcgctc gcgtggcgcg ctcggcggcg acccgagcgc
     3181 gcatgaaccc cgaattcccg ctgcgcgcgc taccggcgcc gctgacggcc gaacggcgcg
     3241 cctccgtgcg agccgcgctt tccgatttgc tcgcctggca gcgagagctc gtgcgttggc
     3301 ccgagctcg
//
LOCUS       DATIML010000609         3539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_412290, whole genome shotgun sequence.
ACCESSION   DATIML010000609 DATIML010000000
VERSION     DATIML010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3539
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412290"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2961
                     /locus_tag="VLJ38_10465"
     CDS             <1..2961
                     /locus_tag="VLJ38_10465"
                     /inference="COORDINATES: protein motif:HMM:TIGR03491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM0106 family RecB-like putative nuclease"
                     /protein_id="HSU39986.1"
                     /translation="VRRRFETFVRATATPAPEERAPTYPEPVEHCAVCPWWKRCDDQR
                     RRDDHLSLVANITRRQRDRLEQAGISTLAKLAELPAERTVEGVDTLPRLREQAELQAR
                     ARADGKPHYRLLGDADRKPLILPPDAKPKLVGLEALPEPTPGDLFFDLEGDAFVEGGG
                     LEYLFGLLELGEPLLDDFTTRDAPGEPRYAGAWARNLADEKRAFETVVDRIVRGRTEF
                     RGLHVYHFGHRETDALKKLSCRHKTREAEVDQLLREHVLIDLHPIVRHALVASVEGYT
                     LKELERLHGFERTTDLSSAARALQLYGFWLETRDPALEPERIERQVEAYNREDCYSTW
                     KLRDWLERLRPELAARERRVLARPAWQDSVEKPERTSRNEASAELGRRLRGGLDERPH
                     GDATAEARWLLADLLDWHWRESKSAWWEYFRTLELAPDDYVGDRAALGGLEYVGEVAA
                     IKSSLVHRYRFPPQDHALRRTPPPIDPLTGKPAGTVAELGEEHLDLARKKASSVPHPS
                     ALIPGKPIDAGAQEESLASLGERLAADTSGAKLERAVFRLLQRATPELGQAPGTPLVN
                     SGEPIDLALPRLALAMNGDVLAIQGPPGSGKTHQAARVIVELVGRGKRVGVTANSHEV
                     CKGLLAKVRELGGESLRLLHYEEPDEASAEPARPFTLAKPKDLATRIARGELDVVGGT
                     AWLWSASAYAGALDCLVIDEAGQFSLANAVAVARAAKNLVLVGDPAQLEQPQKGVHPA
                     GAEVSALGHFLGDGALTLAPERGVFIPTTRRLNPELCAFVSEAFYDGRLTSLPGLEAQ
                     SVHAGGSFEGAGIRFLPVEHRGNTNQSPEEVDAVVRLVGELGLLDASVSKHASFEERD
                     GRSRRLERKDVLVVAPYNAQVSALERALPEGIRVGTVDKFQGKEAPIVIYSLATSTAA
                     EAPRGLEFLYSRNRLNVAVSRAQALAVVVASPELVTVACRTPRQMELVNALCRALEFA
                     ERARGSQSAPSTTF"
     gene            complement(2934..3437)
                     /locus_tag="VLJ38_10470"
     CDS             complement(2934..3437)
                     /locus_tag="VLJ38_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39987.1"
                     /translation="MNTRILVLSFAALAASACAQSGIAVGDLHNGNQDPKQVKFTWKA
                     DAHSPERGSIWGDMPDGKHYTGRYYQVMADVPEQVYSSAWGGAEPYWPDWPVTSPAPA
                     DKANWNTFAATYTGLAIATLTASGGPVIRCRFNVNSPTAGLVRGGSGECKLSDGTTIQ
                     NVVLGAD"
BASE COUNT          595 a         1217 c         1181 g          546 t
ORIGIN      
        1 gtacggcgac ggttcgaaac gttcgtgcgc gcgacggcga cgcccgcgcc tgaagagcgc
       61 gccccaacgt accccgagcc ggtcgaacac tgcgcggtct gcccgtggtg gaaacgctgc
      121 gacgatcagc ggcggcgcga cgatcacctc tcgctcgtcg ccaacatcac gcgccggcag
      181 cgcgatcggc tcgagcaggc tgggatttcg acgctcgcca aactcgccga gctgccggcc
      241 gagcgtaccg tcgagggcgt cgacaccttg ccgcggctgc gcgaacaagc cgagctgcaa
      301 gcgcgagccc gcgcggacgg caagcctcat taccgcctgc tcggcgacgc tgatcgcaag
      361 ccgctgatat tgccgcccga cgccaaaccg aagctcgtcg ggctcgaagc gttacccgaa
      421 ccgacgcccg gcgatctctt cttcgatctc gaaggcgatg cgttcgtcga gggcggcgga
      481 ctcgaatacc tgttcggctt gctcgagctc ggcgagccgc tgctcgacga tttcacgaca
      541 cgagacgccc cgggcgaacc gcgttacgcc ggcgcgtggg cgcgaaacct tgccgacgaa
      601 aagcgtgcgt tcgagaccgt tgtcgatcgc atcgtgcgcg gtcgcacgga gtttcgcggc
      661 ctgcacgtct atcacttcgg gcatcgtgaa acggacgccc tcaaaaagct ctcctgccgt
      721 cacaaaacgc gtgaagccga agtcgaccag ctgctgcgcg agcacgtctt gatagacctt
      781 catcccatcg tgaggcacgc gctcgtcgcc tcggtggagg gttacacgct gaaggagctc
      841 gaacggctgc atggcttcga gcgcaccacc gatttgtcga gcgcggcgcg cgctctgcaa
      901 ctgtacggct tctggctcga aactcgcgac ccggcgctcg agcccgagcg catcgaacga
      961 caggtcgaag cctacaaccg cgaggattgt tactcgactt ggaagctccg cgactggctc
     1021 gaacgcctgc ggccggagct cgccgcgcgc gaacggcggg tgctggcgcg acccgcctgg
     1081 caagactcgg tggaaaaacc cgagcgcacg agccggaacg aagcgtccgc cgagctcggg
     1141 cggcgcctcc gcggcggcct ggacgagcgc ccgcacggcg atgctacggc cgaagcgcgc
     1201 tggctcctcg ccgatttgct cgattggcac tggcgtgagt cgaagtcggc ttggtgggag
     1261 tactttcgca cgctagagct cgcacccgac gactacgtcg gcgaccgcgc cgcgctcggc
     1321 ggcctcgaat acgtgggcga ggtcgccgcg atcaagtcct cgctcgtgca tcgttatcgc
     1381 tttccgccgc aggatcacgc gctccggcgg acgccgccgc ccatcgatcc gctcacgggt
     1441 aagcccgccg gcaccgtcgc cgagctcggg gaagagcacc tcgacctcgc gcgcaaaaag
     1501 gcctcgagcg tgccgcaccc gagcgcactc atcccgggga agcccatcga cgccggcgcg
     1561 caagaagaga gtctcgcgag cctgggagag cggctcgctg ccgacacgag cggcgccaag
     1621 ctcgagcgcg ctgtgttccg actattgcag cgcgcgacgc ccgagctcgg ccaagcgccc
     1681 ggcacgccgc tcgtgaactc cggcgagccc atcgacctag cgctgccgcg gctcgcgctc
     1741 gccatgaacg gcgacgtgct cgcgattcag gggccgccgg gctcgggcaa gacgcaccag
     1801 gcggcgcgcg tcatcgtcga gctcgtcggg cgcggcaagc gcgtcggcgt gacggcgaac
     1861 agccacgaag tctgcaaggg actgctcgcg aaggtgcgcg aactcggcgg cgagagcctg
     1921 cgcctgctgc actacgagga accggacgaa gcgtccgcgg agccggcgcg tcccttcacg
     1981 ctcgccaagc ccaaggacct tgcgactcgc atcgcgcgcg gtgagctcga cgtggtcggc
     2041 gggacggcct ggctctggtc ggccagcgcg tacgccgggg cgctcgactg tctcgtgatc
     2101 gacgaagcag ggcaattttc gctcgcaaac gcggtcgccg tggcccgcgc cgccaagaat
     2161 ctcgtgctcg tgggcgatcc ggcgcagctc gaacaaccgc aaaaaggcgt gcaccccgca
     2221 ggcgccgagg tgtcggcact tggtcacttc ttgggtgacg gcgcgctcac gctcgcaccc
     2281 gaacgcggcg tcttcatccc gaccacgcgc cggttgaacc ccgagctgtg cgcgttcgtc
     2341 tccgaagcgt tttacgacgg ccgcctcacg tcgctgcccg gtctcgaggc acaatccgtg
     2401 cacgcaggcg gcagcttcga gggcgccggc atccgcttct tgccggtgga gcatcgcggc
     2461 aacacgaatc agtcgccgga ggaggtggac gccgtcgtgc gactggtcgg agagctcggg
     2521 ctactcgacg cgagcgtctc gaagcacgct tcgttcgagg agcgggacgg tcgctcgcgg
     2581 cgtctcgaac gcaaggacgt gctcgtcgtc gctccgtaca acgcgcaagt gtccgcgctc
     2641 gaacgagcct tgcccgaggg tatccgagtc ggcacggtcg ataagttcca gggcaaagag
     2701 gcgcccatcg tcatctactc actcgcgacc tcgacggccg cggaggcgcc gaggggactc
     2761 gagtttttgt acagccggaa tcgcttgaac gtcgccgtct cccgcgccca ggcgctggcg
     2821 gtcgtggtgg caagcccgga gctcgtgacg gtggcgtgtc gcacgccgcg acaaatggag
     2881 ctcgtcaacg cgctctgtcg cgcgctcgag ttcgctgaac gcgctcgggg atctcagtca
     2941 gcgccgagca cgacattttg aatcgtcgtg ccgtcggaga gcttgcactc gccgctgccg
     3001 ccacgcacga gacccgccgt cggcgagttc acgttgaagc ggcagcgaat caccgggccg
     3061 ccgctcgccg tcagcgtggc gatcgcgaga cccgtgtagg tcgctgcaaa cgtgttccag
     3121 tttgccttgt ccgcaggcgc ggggctcgtg acgggccaat ccggccagta aggctccgcg
     3181 ccgccccaag cgctcgaata gacctgctcc ggaacgtccg ccatcacctg gtaatagcgt
     3241 ccggtgtagt gtttgccgtc gggcatgtcg ccccagatcg agccgcgctc gggtgaatgc
     3301 gcgtcggcct tccaagtaaa tttcacctgc ttgggatctt gattgccgtt gtgaagatcg
     3361 ccgaccgcga tacctgactg ggcgcaggcg gaggcggcga gcgcggcgaa cgacagaacc
     3421 agaatgcgtg tgttcatgag gacctcaccc ttccgagtct tcgagggttt agtcgaatac
     3481 gtgcgaaccg gcgacgcaag gcgcaagccc gcacgcggca cggtcaccgc gagccctcc
//
LOCUS       DATIML010000610         1941 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3588430, whole genome shotgun sequence.
ACCESSION   DATIML010000610 DATIML010000000
VERSION     DATIML010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3588430"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1103
                     /locus_tag="VLJ38_10475"
     CDS             <1..1103
                     /locus_tag="VLJ38_10475"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA];
                     GO_process: GO:0071978 - bacterial-type
                     flagellum-dependent swarming motility [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HSU39988.1"
                     /translation="AAKAEPPTPAVRPGSPEDIDGALPLDVLALEVGYELVQVVDPEL
                     GGTLVDRIGALRKQIAMDLGTVIPPVHIRDNLELLPGCYRILLLGTEVARGMTRAGRV
                     LAMDPTGSAGPLDGEAVKDPAFGTPARWIHPRDRELAEALGATVVDHTTIVATHLGEV
                     ARTQAHRILGRAELQHLFEVFTKTTPKLVDDLVPNLLSATDVLKVLRNLLRENVSIRD
                     LRTILEGLIELGPATRDTEQLTELVRQRLSRQLTAQYTGPDEVLAGLVLDAPVEEMFR
                     RSLREIASGTGGALNPEHARTLGLALEAGVARMMKAGRAPCVIASPDVRRYLRAFAER
                     RCPQLAVISFREIEPDVTLKPFETISFTSEAA"
     gene            1325..>1941
                     /locus_tag="VLJ38_10480"
     CDS             1325..>1941
                     /locus_tag="VLJ38_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39989.1"
                     /translation="MQFQNFRGSDVTEALSQVRSVLGPDAVIRATRRVKGGGPLDHGY
                     VEIEAAAGAPASRPTPSAPIGGAPVRRANFTRLPGRNDRQSYTPPSSARGSSPEASRG
                     TAQAQNFARAAAATVGGGKSQHSTEMSREIAELKAAVEALQAACTPRTRVLGYLHAAG
                     IEGPLANELAHGAPRGTKNAQTPGSWLRKNIGKRLRTLPSIIERPG"
BASE COUNT          318 a          711 c          639 g          273 t
ORIGIN      
        1 tggcggcgaa agccgagccc ccgactcccg cggtccgccc cggctcgccc gaggacatcg
       61 acggtgcgct gccgctcgac gtgctcgcgc tcgaggtcgg ctacgagctc gtccaggtcg
      121 tcgatcccga gctcggcggc acgctcgtcg atcgcatcgg cgcgctccgc aagcagatcg
      181 ccatggatct cggcaccgtg attccgccgg tgcacattcg cgacaatctc gagcttttgc
      241 ccggctgcta ccgcatcctc ctgctcggga cggaggtcgc gcgcggcatg actcgcgccg
      301 gccgcgtgct cgcgatggat cccaccggca gcgcaggccc gctcgacggc gaagccgtca
      361 aggatccggc gttcgggacg ccagcgcgct ggatccaccc ccgcgaccgc gagctcgcgg
      421 aggcgctcgg cgcgaccgtc gtcgaccaca ccaccatcgt ggcgacgcat ctcggcgagg
      481 tcgcgcgcac gcaagcccac agaattctcg gtcgcgccga gctccagcac ctgttcgagg
      541 tgttcaccaa gacgaccccg aagctcgtcg acgacttggt accgaacttg ctctcggcta
      601 ccgatgtgct gaaggtcctg cgcaatctcc tgcgagagaa cgtctcgatt cgagacctgc
      661 gcacgatcct cgagggcctg atcgagctcg ggcccgcgac gcgcgacacc gagcagctca
      721 ccgagctcgt gcgccagcgc ctctcgcgcc agctgacggc ccagtacacc ggccccgacg
      781 aggtgctcgc gggcctcgtg ctcgacgcgc cggtcgagga gatgttccgc cgctcgctgc
      841 gcgaaatcgc gtccggcacg ggcggcgcgc tcaatcccga acacgcgcgg acgctcggcc
      901 tcgcgctcga agccggcgtg gcgcgcatga tgaaagcggg gcgggcgccc tgcgtgatcg
      961 cgagccccga cgtgcgtcgc tacttgcgtg ccttcgccga gcgacgctgc ccccagcttg
     1021 cggtgatttc gttccgtgag atcgagccgg acgtgacgtt gaagccgttc gagacgatct
     1081 cgttcacgag tgaagccgcc taacatctac tgccagagtc ttggatgacc agatcacgat
     1141 cgacaatgga gaccctaacc cacgcgagtg ctctggcgcg gccaacgccc gctggttttc
     1201 ggctcgaaat ggacgcgaga caccggtgcg aggacgttcg aaacgggtcg cccccaagag
     1261 cggccgtagt tctcgagcga agcacaaacg tctcccagca gtactaaccc aaggagtgcg
     1321 aaccgtgcag ttccagaatt tccgtggatc cgacgtgacc gaggcgcttt cgcaggtgcg
     1381 gagcgtgctc ggtccggacg ccgtcattcg cgccacgcgg cgcgtcaagg gtggtgggcc
     1441 gctcgatcac ggttacgtgg aaatcgaagc cgcggcgggt gcgcccgctt cgcgcccgac
     1501 gccctcggcc ccgatcggcg gagcgcccgt caggcgcgcg aacttcacgc gcctgcccgg
     1561 acgtaacgac cggcagagct acaccccgcc gagctcggcg cgcggctcga gcccggaagc
     1621 gtcgcgaggc acggcgcagg cgcaaaactt cgcgcgcgcc gccgccgcga ccgtgggcgg
     1681 cggcaaatcg cagcactcga cggagatgag ccgcgagatc gccgagctca aagccgcggt
     1741 cgaagcgctc caggccgcct gcaccccgcg cacccgcgtg ctcggttacc tgcacgccgc
     1801 cggcatcgag ggcccgctcg cgaacgagct cgcccacggc gcgccgcgcg gcacgaagaa
     1861 cgcgcagacg cccggcagct ggctgcgcaa gaacatcggc aagcgcctgc gcacgctgcc
     1921 ctcgatcatc gagcgtcccg g
//
LOCUS       DATIML010000611         2644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1281813, whole genome shotgun sequence.
ACCESSION   DATIML010000611 DATIML010000000
VERSION     DATIML010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2644
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281813"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VLJ38_10485"
     CDS             complement(<1..269)
                     /locus_tag="VLJ38_10485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39990.1"
                     /translation="MVLPLTTRLSLALGAVIFASACGGADDDTTNGLGKGAATGKSTG
                     GTGGTAIITLTGGTSGSSNPGAGGTGNATSSGGTGPYTLPAGYTRA"
     gene            445..1653
                     /locus_tag="VLJ38_10490"
     CDS             445..1653
                     /locus_tag="VLJ38_10490"
                     /inference="COORDINATES: protein motif:HMM:NF002325.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSU39991.1"
                     /translation="MSAQSELAELGQKFLYPNYRQAPVVIARGEGAVLWDADGKRYID
                     MLAGIAVSALGHAHPKLVAAIADQAARVIQVSNYYYNEPNVRLAQKLTALTGMDRAFF
                     CNSGTEAVEAALKLVRRHFHTLGQPERLKVLAYSNSFHGRTLGALAATGQDKYKEGFG
                     PLPGALHVPYGDLAATRRALGPEVAAVIFEPVQGEGGVVPAPPGFLAGLRTLTAETGT
                     LLIADEIQTGVGRTGTFLACQAAGIQPDIVVLAKGLAGGVPIGSLLCKQELASALPPG
                     SHGSTFGGNALASRAALTVLETLESEGLIARVRELGELLGAGLAKLAARHPKKIESVR
                     GAGLLQAAVLKEGIDPRGILGALQSRGLLLSVAGARALRFSPPLVVKPAELDEALGML
                     DATLTELTLQ"
     gene            1650..>2644
                     /locus_tag="VLJ38_10495"
     CDS             1650..>2644
                     /locus_tag="VLJ38_10495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39992.1"
                     /translation="MTAASAVFGEATRPCSTCGKMVDPLRAERVAFVRERFRYFCSAA
                     CCERYGSDVYATPLPVPAPRVGHAPAGAPRVATSEPAASNPATAPEAARAVAEIARAT
                     SVGEELERLPRPRVSTSPPPPAVASTSEPRSASASGLLLLLAGLGGVLSMGLVLAGGS
                     RTVLAARVVLAAVACAALVTERATSPRDPAELNAAVFAAAPVAAAGIAWGTLVLGDAR
                     AADAALLTSVIVCLGALSVALLRRARRPIDAARERLVAVMSTVSRRVVDDGTVEAHAL
                     DLRPGEEILVEAGDVIPADATVTAGSGTVYPWLDAKATHAVREGDTLLAGGRVAEG"
BASE COUNT          367 a          954 c          921 g          402 t
ORIGIN      
        1 gccctggtgt agccggccgg cagcgtgtac gggcccgtgc cgccgctcga ggtcgcgttg
       61 cccgtcccgc ccgcgccggg attgctgctg ccgctcgtgc cgccggtgag cgtgatgatg
      121 gcggtgccac ccgtgccgcc cgtgctcttg cctgtcgctg cgcctttccc gaggccgttc
      181 gtggtgtcgt cgtcggcgcc gccgcacgcg gaagcgaaga tgacggcgcc gagcgcgagt
      241 gagaggcgag tcgtgagggg tagcaccatg gagtctccgg agcttcgagg cagaagccac
      301 gagcgatcat cagaatagcc ttggcgtcgt gcctcgacca gcgccgttcg gctcatcgac
      361 gcgcgctgac ccagaacttt tttggatggt gaccaaggtg cgccttattc ccacactgga
      421 ccaaagtgct atatgaccgc tgctatgagc gcccagagtg agctcgccga gctcggtcaa
      481 aagtttctct acccgaacta tcgacaagct ccggtcgtga ttgcgcgcgg cgaaggggcc
      541 gtgctctggg acgccgacgg caagcgttac atcgacatgc tcgccggcat cgccgtgagc
      601 gcgctcggac acgctcaccc gaagctcgtc gccgcgatcg ccgatcaggc cgcccgcgtg
      661 atccaggtct cgaactacta ttacaacgag ccgaacgtcc gtctcgcgca gaagctcacc
      721 gcgctcacgg gcatggaccg cgccttcttc tgcaactccg gcaccgaggc cgtcgaagca
      781 gccctgaagc tcgtgcgccg tcactttcac accctcggcc agcccgagcg gctgaaggtg
      841 ctcgcctaca gcaattcctt ccacggccgc acgctcggcg cgctcgccgc gacgggccaa
      901 gacaaataca aagagggctt cggtcccctg ccgggcgccc tgcacgtgcc gtacggcgat
      961 ctcgcggcca cccgccgcgc gctcggcccc gaagttgcgg cggtgatttt cgagccggta
     1021 cagggtgaag gcggtgtggt gccggcgccg cccggcttcc tcgcgggcct acgcacgctc
     1081 acggccgaga caggcacgct cctcatcgcc gacgagatcc agacgggggt tggccgcacc
     1141 ggaacgttcc tcgcgtgcca agccgccggc atccagcccg acatcgtcgt gctcgccaag
     1201 ggactcgcgg gcggcgtgcc gatcggttcg ctgctctgca agcaagaact cgcgtcggcg
     1261 ctgccccccg gcagccacgg ctcgacgttc ggcggcaacg cgctcgcctc gcgcgccgcg
     1321 ctcaccgtgc tcgagacgct cgagagcgag gggctcatcg cacgcgtgcg cgagctcggc
     1381 gagctcctcg gggcgggact cgccaagctc gcggcccggc atcccaagaa gatcgagagc
     1441 gtgcgcggcg ccgggttgct gcaggcggcc gtgctcaaag aaggcatcga tccccgaggc
     1501 atactcggcg ccctacagtc ccgcgggctc ctcctcagcg tcgctggggc gcgcgcgctc
     1561 aggttctcgc cgccgctcgt cgtcaagccc gccgagctcg acgaagcgct cggcatgctc
     1621 gacgcgacgc tgaccgagct caccttgcaa tgacggccgc atccgccgtc ttcggcgagg
     1681 cgacgcgccc ttgctcgacc tgcggcaaaa tggtggaccc gctgcgcgcc gagcgcgtgg
     1741 cgttcgtgcg tgaacggttt cggtacttct gcagcgcggc gtgctgcgag cgttatggca
     1801 gcgatgtgta tgcgacgccg ctccctgttc cggcgccgcg cgtgggacat gcgcccgcgg
     1861 gcgcgccgcg agtcgcgacg tccgagcccg ctgcgagcaa ccctgcaacc gcacccgaag
     1921 cggcgcgcgc cgtcgccgaa atcgcgcgtg cgacgagcgt cggtgaagag ctcgagcggc
     1981 tgccgcggcc gagggtgagc acgtcgcctc cgcccccggc cgtcgcgagc acgagcgaac
     2041 cgcgcagcgc gagcgcgagt ggactcttgc ttttgctcgc cggcctcggc ggcgtactct
     2101 cgatgggcct cgtcttggcg gggggttcgc gcaccgtcct cgccgcgcgc gtcgtgctcg
     2161 cggccgtcgc ttgcgccgcg ctcgtgacgg aacgggcgac gagcccgcgc gacccggcgg
     2221 agctcaacgc ggccgtgttc gcggccgcgc ccgtcgccgc ggcgggcatt gcgtggggca
     2281 cgctcgtgct cggtgacgcg cgcgcggccg acgcggcgct cctgacgagc gtcatcgtct
     2341 gtctgggcgc gctgtcggtc gcgctgttgc gccgcgctcg gcgtccgatc gacgcggcac
     2401 gcgagcggct cgtcgccgtg atgagcaccg tgtcacgccg cgtggtcgac gacggcacgg
     2461 tcgaggcgca cgcgctcgat ttacgccccg gggaagagat cctagtggaa gcgggtgacg
     2521 tgatcccggc cgacgcgacg gtcacggcgg gcagcggcac cgtctacccg tggctcgacg
     2581 ccaaagcgac gcacgccgtg cgcgagggcg acaccttgct cgccggcggg cgcgtcgccg
     2641 aagg
//
LOCUS       DATIML010000612         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_703996, whole genome shotgun sequence.
ACCESSION   DATIML010000612 DATIML010000000
VERSION     DATIML010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703996"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VLJ38_10500"
     CDS             complement(<1..653)
                     /locus_tag="VLJ38_10500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39993.1"
                     /translation="MSKSRRTFHFLGRTGALVATLLACASTARAADWDPDSEADNYAR
                     GWVRLDADRVGVQGWVGTTLPLGRLELAGDVVISQAYSGVVDPLQNAASAAEVGSGYR
                     APSVRLELGPALSHGAFFFLPKLGLGYDFERQKIAPFVPQLMTIIQGGPLYVESWLQY
                     FVYAAFDHGSQDSFYTLELALVAVDNHLALGVQAELTLATANSPPKHVRSLPLGLAA"
     gene            complement(650..>1627)
                     /locus_tag="VLJ38_10505"
     CDS             complement(650..>1627)
                     /locus_tag="VLJ38_10505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39994.1"
                     /translation="GNMMVLLGTRVTTTAKARQEVQLEQVLACYPGLNADDFESDAVS
                     LLLDWLTPPTNPTALLANAKSLVPRGYEIFKQLGCAGCHSGPFLTNNRMERLYARRSS
                     ELGIAPPSTAGFRPLGRGTGPALETAPYRSLANRALQLFVAPPYDPATGKALTEGGAV
                     PGLFGSRPVGYKTLQLRYLWGSAPYLHDGGVAVALKPGSAPPGDDLKALLARPAADKF
                     YGMGTLLAYRETHQSGEPWPNAALSLQALVLEGERRRVAADNRAPVLPVPLGDADNPL
                     HAPAQTSLASLGVEGIGHEFFIDDVPGGDRVTALVAFLLALDDEPGALP"
BASE COUNT          264 a          542 c          585 g          236 t
ORIGIN      
        1 ttggcagcca ggccgagggg caagctgcgc acgtgcttgg gtggggagtt cgccgtcgcg
       61 agcgtcagct ccgcctgcac gccgagcgct aggtgattgt cgaccgccac cagcgcgagc
      121 tcgagcgtgt agaagctgtc ctgtgagccg tgatcgaacg cagcgtagac gaaatactgg
      181 agccaggatt cgacgtagag cggccccccc tgaatgatgg tcatgagctg cgggacgaac
      241 ggtgcgatct tctggcgctc gaagtcgtag ccgaggccga gcttcggcag aaagaagaac
      301 gcgccgtgtg agagcgctgg cccgagctcg aggcgcacgc tcggcgcccg gtaaccacta
      361 ccgacctcgg ccgcggacgc tgcgttctgc agcggatcga cgacgccgga atacgcttgc
      421 gagatgacga cgtcgcctgc gagctcgaga cgaccgagcg gcagcgtcgt gcccacccag
      481 ccttgcacgc cgacgcggtc cgcatcgagc cgcacccagc cgcgcgcgta gttgtccgcc
      541 tccgaatccg gatcccaatc ggcggcgcgc gccgtgctgg cgcacgcgag caacgtcgcg
      601 accaaagcgc ccgtgcgccc gagaaagtga aacgtccgcc gggacttgct cacggtaaag
      661 ctcctggttc gtcgtccagc gcaagcagga acgccaccag cgcggtgacg cgatcgcctc
      721 ccggaacatc gtcgatgaaa aactcgtggc cgatgccttc gaccccgagc gaggcgaggc
      781 tcgtttgcgc cggcgcgtgc agtggattgt cggcgtcgcc gagcggcacc ggcaggacgg
      841 gcgcgcgatt gtcggccgcg acgcggcgcc gctcgccctc gagcacgagc gcttgcaggc
      901 tgagcgcggc gttcggccac ggctcgccgc tctgatgcgt ttcgcggtag gcgagcagcg
      961 ttcccatgcc gtaaaatttg tccgcggccg gtcgcgcgag cagcgccttc aggtcgtcac
     1021 cgggaggcgc ggagcccggc ttgagcgcga cggcgacgcc tccgtcgtgc aggtacggcg
     1081 cggagcccca caggtaccgg agctgcagcg tcttgtaacc gacggggcgc gagccgaaga
     1141 ggcccgggac cgcgccgccc tcggtcagcg ccttgccggt cgccggatcg taagggggcg
     1201 cgacgaagag ctgcagcgcg cgattggcga gcgaacggta cggcgccgtt tcgagcgccg
     1261 gcccggtgcc gcgaccgagc gggcgaaatc cggccgtcga gggaggcgcg atgccgagct
     1321 cgctgctgcg gcgcgcgtac agccgttcca tgcggttgtt cgtgaggaac gggcccgagt
     1381 ggcagcccgc acacccgagc tgcttgaaga tttcgtagcc gcgcggcacg agcgacttcg
     1441 cgttcgcgag cagcgccgtg gggttcgtcg gcggggtcag ccaatcgagc aggagtgaca
     1501 ccgcgtcgga ctcgaagtca tcggcgttca ggcccgggta gcacgcgagc acctgctcga
     1561 gctgaacctc ctgccgcgcc tttgccgtgg tggtgacgcg cgttccgagc agcaccatca
     1621 tgttgcc
//
LOCUS       DATIML010000613         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1859150, whole genome shotgun sequence.
ACCESSION   DATIML010000613 DATIML010000000
VERSION     DATIML010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1859150"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..171)
                     /locus_tag="VLJ38_10510"
     CDS             complement(4..171)
                     /locus_tag="VLJ38_10510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39995.1"
                     /translation="MRTLTSAPSISLAACAIAPVLGAATWLAATQIVNAAALTVELQY
                     GFWPEMLPPGA"
     gene            158..1006
                     /locus_tag="VLJ38_10515"
     CDS             158..1006
                     /locus_tag="VLJ38_10515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU39996.1"
                     /translation="MSVRTESFPDDRPEVVPPPEPGSESAVLSWDSPRHEHARLRLCR
                     ARDDCLERWVSFEPTDPEAERGRTLGFLAAAVFLETTPAAPAASPAPIAKPPPPATSS
                     PVAVAAAPAKLERDFPRGEVSAAAAASGPGDGTALGATLAGDLALNARFRIGLAGELR
                     FGELANAEASSRIGSLLVHTSWLAWRPTQGTWLGPSLGIGIYHLSVSHFSSDDPEPDR
                     QSRFLPGGTLGGMAGVDFNRTSSLFVELAAEVLAGKTTVKVHEEVRATWPPVNPLARV
                     GLRASF"
     gene            1090..1758
                     /locus_tag="VLJ38_10520"
     CDS             1090..1758
                     /locus_tag="VLJ38_10520"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU39997.1"
                     /translation="MSPAPLRPLRLVQGNSPANRLPAAETDGALLAAVIAGEASAAVN
                     FHDRLRPVIERTLGRLLGARDPDHDDLVQQALIDLVLSLERFRGECPLDAWAAVIAAR
                     TAYKHIRRRKIERRLFVLTDSETFDRADRAASGTALLRNSIRRVEKHLTDMDANRAWT
                     FVLHDVHGFSLKEISDITKVSVAAVQSRLVRGRKEMHERILCDPDLAGSMDDLARSHR
                     ELHD"
     gene            1751..>2378
                     /locus_tag="VLJ38_10525"
     CDS             1751..>2378
                     /locus_tag="VLJ38_10525"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HSU39998.1"
                     /translation="MTEPTRYAALAAWLLRERPLTKESRLSRDVGISVVAHGIAMRRK
                     RRGARLAAAGVGFAAVAALAIFFAAAPRNSRASACRGANCTGAGERDHRRGLDAGQSI
                     VAPAGAPTSVVLTSGTQIALDAKSVLECRDASATQRFALLRGGAHLHVAKLRPNERFL
                     VDTPHAEVEVRGTVFDVKLEPATNDCAERSFVAVHEGRVEVRADGKAVT"
BASE COUNT          379 a          818 c          819 g          362 t
ORIGIN      
        1 tgactacgcg ccaggcggca acatctcggg ccagaagccg tattgaagct cgacggtgag
       61 cgcggcggca ttgacgatct gggtagcggc gagccaagtc gccgcaccga gcacgggtgc
      121 gatggcgcaa gccgcgagcg agatgctcgg cgccgaagtg agcgttcgca ccgagtcgtt
      181 ccccgacgac cgtcccgaag tcgttccgcc gccggaaccc ggcagtgaga gcgccgtgct
      241 gtcgtgggac tcgccgcgtc acgagcacgc gcggctgaga ctctgtcgag cgcgcgacga
      301 ctgtctcgag cgctgggtga gcttcgagcc gactgatccc gaggccgagc gcggccgcac
      361 gctcggcttt ctcgcggcgg ccgttttcct cgaaacgacg ccggccgcgc ccgcggcgag
      421 ccccgctccg atcgcgaaac cgccaccgcc ggcgacgagc agcccggtcg cagtcgccgc
      481 cgctccggcg aagctcgagc gcgactttcc gcgaggggag gtcagcgcgg cagccgcggc
      541 gtcagggcca ggcgacggca cggcgctcgg ggcgactctc gccggggatc ttgcgctgaa
      601 cgcacggttt cgcatcggtt tggcaggcga gcttcgtttc ggggagctcg cgaacgcgga
      661 ggcttcgtca cgcatcggct cgctccttgt ccacacgagc tggctcgcct ggcggccgac
      721 gcagggaact tggctggggc cgagccttgg tatcggaatt tatcacctct cggtgagcca
      781 cttttcgtcc gacgacccgg agccggaccg gcaaagccga ttcttgcctg gaggaacttt
      841 gggtgggatg gcgggagtgg atttcaacag gacatcgagc ttgttcgtgg aactcgcggc
      901 ggaagtcctg gcaggcaaga cgactgtcaa agtgcacgag gaagtgcgcg cgacctggcc
      961 cccggtcaac ccgctcgcgc gggtaggcct gcgcgcgtct ttctaagcgc gagcgcggcc
     1021 gacgtcccaa gatcggccta gcgcgggcct gctacagtgg ccatcaaggc actcccgatc
     1081 agggcatcca tgtctccagc acccctgcgc ccgctccgtc tcgtccaagg caactccccc
     1141 gccaaccggc tgccggcggc ggagacggat ggcgcgctgc tcgcggcggt catcgcggga
     1201 gaggcgtccg ccgcagtaaa ttttcacgat cggttgcgac cggtcatcga gcgcacgctc
     1261 ggtcgtctac tcggcgcgcg cgatccggat cacgacgatc tcgttcagca ggcgctgatc
     1321 gatctcgtgc tcagcctcga acgtttccgc ggcgaatgcc cgctcgacgc ctgggccgcc
     1381 gtgatcgcgg cgcgcaccgc gtacaagcac atccgccgcc gcaagatcga acgccgactc
     1441 ttcgtgctca ccgactcgga gaccttcgat cgcgccgaca gggccgcgag cggcaccgcg
     1501 ctcttgcgta actcgattcg tcgggtcgaa aagcacctga cggacatgga cgcgaaccgc
     1561 gcctggacgt tcgtgctgca cgacgtgcac ggcttctcgt tgaaagagat cagtgacatc
     1621 accaaagtga gcgtcgctgc cgtgcagagc cggctcgtgc gcgggcgcaa agagatgcac
     1681 gagcgcattc tttgcgatcc ggatctcgcg ggctcgatgg atgatctcgc ccgctcgcac
     1741 cgggagctcc atgactgagc ccacgcgcta cgcggcgctc gcggcgtggc tgctccggga
     1801 gcgaccgctg acgaaggaat cgcgactgag tcgcgacgtg ggcatcagcg tcgttgcgca
     1861 cggcatcgcc atgcgacgta aacggcgggg cgcgcgcctc gcggccgccg gcgtaggctt
     1921 cgccgccgtg gcggcactcg cgatcttttt cgcagccgct ccgcgaaatt cgcgcgcgag
     1981 cgcctgccgc ggcgcgaact gcacgggcgc aggcgaacgc gaccaccgtc gcgggctcga
     2041 cgcgggacag agcatcgtcg ccccggctgg agcgcccacg tccgtggtgc tcacgagcgg
     2101 aacccagatc gcgctcgacg ccaagagcgt gctcgagtgc cgcgacgcct cggcgacgca
     2161 gcgtttcgcg ctgctgcgcg gcggtgccca cctgcacgtc gccaagctgc gaccgaacga
     2221 gcggttcttg gtcgacacgc ctcacgccga ggtggaggtg cgcggcaccg tgttcgacgt
     2281 gaagctcgag cctgccacga acgactgcgc cgagcgatcg ttcgtcgccg tgcacgaggg
     2341 acgcgtcgaa gtgcgcgccg acggcaaagc cgtcacgc
//
LOCUS       DATIML010000614         2249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3589089, whole genome shotgun sequence.
ACCESSION   DATIML010000614 DATIML010000000
VERSION     DATIML010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3589089"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(362..1105)
                     /locus_tag="VLJ38_10530"
     CDS             complement(362..1105)
                     /locus_tag="VLJ38_10530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU39999.1"
                     /translation="MNEPAASPSAPDLDVTGLQVLYGGIAAVKGVSFSVGRGEIVALI
                     GANGAGKTSVLKALVGLVPAARGSVHLFGRDVTTVPTHRRTALGATLVPEGRAIFAGM
                     TVRENLELGAFLKRDPATLGQRLERVLALFPRLGERLAQAGGTLSGGEQQMLAIGRAL
                     MGQPRLLLLDEPSLGLAPKLVSQIFASIVEIAKTGLTILLVEQNTRLALETAHRAYVL
                     VTGEIVLAGPCSELRNDQRIKAAYLGEAL"
     gene            complement(1102..1896)
                     /locus_tag="VLJ38_10535"
     CDS             complement(1102..1896)
                     /locus_tag="VLJ38_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU40000.1"
                     /translation="MTLLALERVDKVFGGLRALRSVSFEVTPKSIFGLIGPNGAGKTT
                     LFNVVTGVYRPDGGHLRFDGAEIGGLPPARVAELGVARTFQNIRVFRSMSVLENVMVA
                     GHKLHRSGVLSAIVRNTAHANDERALTARAHELLRILGLDEQAGEIAGSLPYGSQRRL
                     EIARALMLAPKLLLLDEPAAGMNSSEARELERQIRFLRDDLGVTVVLVEHNMSLVMSV
                     CERIHVVDHGETIAEGTPAEIREHPRVLAAYLGEETPATGRKESEA"
     gene            complement(1893..>2249)
                     /locus_tag="VLJ38_10540"
     CDS             complement(1893..>2249)
                     /locus_tag="VLJ38_10540"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSU40001.1"
                     /translation="TRLKVLAFTLSAATAGIAGGLFAHMQSGIRPEDFKFDKSIDMIV
                     MIIVGGLGSISGAALGGVFVAVTLELMRDLQQYRLVLYALLLIVIMLVRPEGLLGTRE
                     ISVAALRRRFRQPERP"
BASE COUNT          371 a          765 c          753 g          360 t
ORIGIN      
        1 cacgcagtga ttcgccgtga tggcgagcgt cgccgagagc gcgaccgcgc cgcacgtgac
       61 gccgtccgcg ccgagaatgg cgagggttgg ttcgtcgccc accagcggag cgttgacaga
      121 gacctcgtga cacgcgacga cgccgaaaag agccagcgat ccgaaaattt tgcgcatgaa
      181 accgccttgg gcagagcttc gccagagccc gccgcggccc tccctggacc gctgctcggg
      241 catgcgcgga tctgatgcgc acaccgcgac cgacattcga cccgcgcatc gaagtcggtt
      301 cgattgccgg ttctcgtgtg acgcgcggcg tctcgtgcac cgcaggtccg gcggctccgt
      361 cctaaagtgc ctcgccgagg taagccgctt tgatcctctg gtcgttgcgc agctccgagc
      421 aggggcccgc gaggacgatt tcgccggtga ccagcacgta cgcgcgatga gccgtttcga
      481 gtgcgagacg cgtgttctgc tcgacgagca ggatcgtgag gccggtcttc gcgatttcca
      541 cgatactagc gaaaatttgc gacacgagct tcggcgcgag cccgaggctc ggctcgtcca
      601 gcagcagaag gcgtggctgt cccatgagcg cgcgcccgat ggcgagcatt tgctgctccc
      661 cgcccgagag tgtgccgccc gcctgggcca ggcgctcgcc gaggcgagga aacaaagcga
      721 gcacgcgctc gagccgctgt ccgagcgtgg ccgggtcgcg cttcaggaac gcgccgagct
      781 cgaggttttc gcgcacggtc atacccgcga agatggcgcg cccttcgggt acgagcgtcg
      841 ctcccagggc cgtacggcga tgggtcggca cggtcgtcac gtcacgtccg aacaggtgca
      901 cgctgccgcg cgcggcgggt accaagccga cgagcgcctt cagcacgctc gtcttgccgg
      961 cgccgttcgc gccgatgagc gccacgatct ccccgcgccc gacgctgaac gagacgccct
     1021 tcacggccgc gatcccgccg taaagtacct ggagtcccgt gacgtcgagg tccggtgcgc
     1081 tcggggaagc ggccggctcg ttcacgcttc cgactccttg cgacccgtcg ccggcgtctc
     1141 ctcaccgagg taggccgcga gcacgcgcgg gtgctcgcgg atttccgcgg gcgtgccttc
     1201 agcgatggtc tcgccgtgat cgacgacgtg aatgcgttcg cacacgctca tcacgagaga
     1261 catgttgtgc tcgaccagca ccaccgtgac gccgaggtcg tcgcgcaaga agcggatctg
     1321 gcgctcgagc tcgcgtgctt cgctgctgtt catgccggcg gctggttcgt cgagcaagag
     1381 cagcttgggc gcgagcatga gcgcgcgcgc gatctcgagc cggcgctgtg agccgtacgg
     1441 caagctgccg gcgatctcgc ccgcttgctc gtccaggccc aaaattcgca gtaattcatg
     1501 cgcccgcgcc gtgagggcgc gctcgtcgtt cgcgtgtgcc gtgttgcgaa cgatggcgct
     1561 cagcacgccc gagcggtgca gcttgtgacc ggcgaccatg acgttctcga gcacgctcat
     1621 cgagcgaaag acgcgaatgt tttggaaggt tcgcgcgacg ccgagctcgg ccacgcgcgc
     1681 gggcggtagc cccccgatct cggcgccgtc gaagcgaagg tggccgccgt cgggtcgata
     1741 cacgccggtg acgacgttga agagcgtcgt cttgcccgcg ccgttcggcc cgatgagccc
     1801 gaagatggac ttcggcgtga cctcgaagct cacgctccgc aaggcgcgca gcccaccgaa
     1861 caccttgtcg acccgctcga gggcgagcag cgtcacgggc gctccggttg gcgaaatcgg
     1921 cgccggagcg ccgcgacgct gatttcccgc gtcccgagca acccttcggg ccgcaccagc
     1981 atgatcacga tcagcaagag cgcgtagagc acgaggcggt attgctgcaa gtcgcgcatg
     2041 agctcgagcg tcacggcgac gaacacgccg ccgagcgccg cgcccgaaat cgagcccaat
     2101 ccgcccacga tgatcatgac gatcatgtcg atcgacttgt cgaacttgaa gtcttcggga
     2161 cgaattcccg actgcatgtg cgcgaagagc ccgcccgcga tgccggccgt cgctgcgctc
     2221 aacgtgaagg cgagcacctt gagccgcgt
//
LOCUS       DATIML010000615         3913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3589140, whole genome shotgun sequence.
ACCESSION   DATIML010000615 DATIML010000000
VERSION     DATIML010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3589140"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1655)
                     /locus_tag="VLJ38_10545"
     CDS             complement(<1..1655)
                     /locus_tag="VLJ38_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSU40002.1"
                     /translation="MPAFIELLARSAFSFLRGASRPEELVERAKELELEAIALCDRDG
                     LYGSVRAHAAGQELGQRVIVGAELGVATGIERRGSWRTPKREKAAPELPVVALLVRDH
                     EGYTNLCRLLTRAHADLEKGQSALEPGWLAEHSRGLVAVVPCPRRPGDASTPSEGLLT
                     AVKDAFGENAAIAVHRHLDRFERERFMAARSWAHRYGLRLVASARPSFHAPERKPLAD
                     VMHCIRLGTTLEAAGTALDGNAEAYLRSELEMRRLFAERPDLVDAAGELGEELRFSLS
                     QLRYRFPCTLEPGESADERLRRLTDEGLARRYPDGVSDAVRAQIEKELALIAEIDVAP
                     YFLSTLEVVEIARRRRILCQGRGSAANSAVCYALGITAVDPARSSLLFERFLSAERRE
                     PPDIDVDFEHERREEVIQELYERWGRERAAMVSEVISYRGKSALREVGKVFGLSPEQI
                     ERLSGSIIHWEGSSEASEKRLTELGFDPEGSTLRQVVALARELEGFPRHLSIHVGGFV
                     LSADPLDAVTPVEPGRMPNRTVVPWDKDDIEVLGFFKIDVLGLG"
     gene            1812..2267
                     /locus_tag="VLJ38_10550"
     CDS             1812..2267
                     /locus_tag="VLJ38_10550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40003.1"
                     /translation="MPRPSEVDVEELADSEASEVTPRSRVQHHFELEPDSTSRGPFES
                     RRLGVRAPASFSVCMTRQGKRIRARAAEVSTTGVLVDFRYSEPCAFDGLVTLELAVPA
                     LPKPIRCAARFARYVGRLQAFEFMIIGRDDRLSLAEYIDRVARPSQREF"
     gene            complement(2338..3021)
                     /locus_tag="VLJ38_10555"
     CDS             complement(2338..3021)
                     /locus_tag="VLJ38_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HSU40004.1"
                     /translation="MRPTVLLFDIDGTLLTTGHAGRRAMERTFARYGSADACNFRFDG
                     LTDKQIARQALTTLGIEPTEAAIMASLATYLELLEEEVQRTDEADYRLHEGIVDALRA
                     ARERAHGIGLGTGNLVEGARIKLSRVGVYEEFAFGGFGSDAEDRTELLRHGAERGARH
                     LGAPLDACRVVVIGDTPKDVAAAQGIGAESIGVGTGTYSVETLLACGATHAFPSLLAP
                     GALAALLGE"
     gene            complement(3049..>3913)
                     /locus_tag="VLJ38_10560"
     CDS             complement(3049..>3913)
                     /locus_tag="VLJ38_10560"
                     /inference="COORDINATES: protein motif:HMM:NF013340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HSU40005.1"
                     /translation="AGTGGGSGTTSTAAGTGGTTSGSAGMASTAAGTGGSGGSTATGG
                     SGGATTNAGQGGSGGSTGGQGGHAGSTAGASGRGTTGGAGTSAGGQGRGGMSGASGSA
                     GSGTSGTGAGGAAAGGRSAGGNGGTGGIGSMTLTSSVIMEGGMFPDQNTCASTADDSP
                     DLTWTAGPNGTMSYAVVLFDTSNMMTHWVIWDIPPSVTALPAKLDDMAMPAMPAGAKQ
                     KSFQGNGYAGPCPSGKDHVYRFTVYALPVAMLSGVTTSSQPAQIGTAITNANPLASAS
                     LSAHSLASQAN"
BASE COUNT          650 a         1371 c         1246 g          646 t
ORIGIN      
        1 ccgagaccga gcacgtcgat cttgaaaaag ccgagcactt cgatgtcgtc cttgtcccaa
       61 ggcacgaccg tgcgattcgg catgcgcccg ggctcgacgg gcgtcacggc gtcgagcgga
      121 tcggccgaga gcacgaaccc gcccacgtgg atcgagaggt gccgcggaaa accctcgagc
      181 tcacgcgcga gcgccaccac ttgtcgcagc gtagaacctt ccggatcgaa gccgagctcg
      241 gtgaggcgct tttcgctcgc ttcgctgctg ccttcccagt gaatgatgct tccgctcaaa
      301 cgctcgattt gttcgggtga aagcccgaat accttgccca cttcgcgcag cgcgctcttg
      361 ccgcgatagg aaatcacctc cgagaccatg gccgcgcgct cgcgccccca gcgctcgtac
      421 agctcctgaa tcacctcttc gcgccgctcg tgctcgaagt cgacgtcgat gtccggcggc
      481 tcgcgccgct ccgcgctcaa aaaacgctcg aacagcaagc tcgaacgcgc cggatcgacg
      541 gccgtgattc cgagcgcgta gcagacggcg ctgttcgcgg cgctgcctcg cccctggcac
      601 aagatgcggc gccggcgcgc gatctcgacc acctcgagcg tcgacaaaaa atacggagcc
      661 acgtcgatct cggcgatgag cgcgagctct ttttcgatct gcgcgcgcac ggcgtcgctt
      721 acgccgtccg gatagcggcg cgcgagccct tcgtccgtga ggcgcctgag ccgctcgtcg
      781 gcgctctccc ccggctcgag cgtgcatgga aagcgatagc ggagctgcga gagcgagaaa
      841 cggagctcct caccgagctc acccgccgca tcgacgagat ccggacgttc ggcgaaaagc
      901 cgacgcatct cgagctcgga gcgcaggtac gcttcggcgt tgccgtcgag cgccgtgccg
      961 gccgcttcga gcgtcgtgcc gaggcggatg cagtgcatca cgtcggcgag cggcttacgc
     1021 tcgggcgcgt gaaagctcgg ccgcgcgctc gcgacgagcc gcaagccgta acggtgcgcc
     1081 caggaacgag ccgccatgaa gcgctcccgt tcgaaacgat cgagatgacg atgcacggcg
     1141 atggcggcgt tctcgccgaa ggcatctttg actgcagtga gcaaaccttc ggaaggcgtg
     1201 ctcgcgtcac ccggacggcg cggacacggg accacggcga cgagtccgcg cgagtgctcg
     1261 gcgagccaac cgggctcgag cgcgctctgt cccttctcca aatcggcgtg cgctcgcgtg
     1321 agcagacgac acagattcgt gtagccctcg tgatcgcgca cgagcagcgc cacgacgggc
     1381 agctccggcg ccgccttttc gcgctttggc gttcgccacg aaccgcgccg ctcgataccc
     1441 gtggcgacgc cgagctcagc gcccacgatc acccgttgcc cgagctcttg tcccgcggcg
     1501 tgcgcgcgca ccgaaccata gagcccatca cgatcgcaaa gcgcgatggc ttctagctcg
     1561 agctccttgg cgcgttcgac gagctcctcg ggccgtgatg ctcctcgcaa aaacgaaaag
     1621 gcagagcgcg cgagcagctc gatgaaggcg ggcacgatta cctgaacaga taatcaggtc
     1681 tgtagcggcg gcaagaatta atggtcttta ttgattcatt tcagctgttt gagtgagtgg
     1741 ccacccaggg cccgcgcctg gcgtccgcgg gacggggtta ccaaccacca acacccgagg
     1801 aggcctgccc catgccacgc ccgagtgaag tcgatgtcga agagctcgcc gacagcgagg
     1861 cgagtgaggt cactccgaga agccgcgtcc aacaccattt cgagctcgag ccggactcga
     1921 cttcgcgcgg accgttcgaa tcgcggcggc tcggcgtgcg cgcgccggct tccttcagcg
     1981 tgtgcatgac gcgacagggc aagcgcattc gcgcgcgcgc cgccgaagta tcgacgaccg
     2041 gcgtgctcgt cgattttcgc tactccgaac cgtgcgcctt cgacgggctc gtcacgctcg
     2101 agctcgccgt gcccgcgcta ccaaagccga tccgctgcgc ggctcgcttc gcgcgttacg
     2161 tcgggcgcct gcaggcattc gaattcatga tcattggccg cgacgatcgc ttgagtctcg
     2221 cggagtacat cgatcgcgtc gcgcggccgt cgcaacgcga attttgacgt tcggcctagt
     2281 cgcacgacgc gagacggcag cgtcaatcgc cgagcaacgt cagcgcgtgc ggcgcagtca
     2341 ctcgccgagt aacgccgcga gcgcgcccgg cgccaaaagc gaagggaacg cgtgtgtggc
     2401 gccgcatgcg agcagcgttt cgacgctgta agtcccggtg ccgacaccga tcgattcggc
     2461 gccgatgccc tgcgccgcgg ccacgtcctt cggcgtatcg ccgatcacga ccacgcgaca
     2521 cgcgtcgagc ggagcgccga ggtgacgcgc gccgcgctcg gcgccgtgcc gcaaaagctc
     2581 ggtgcgatcc tcggcgtccg aaccgaagcc gccgaacgcg aactcttcgt acacgccgac
     2641 gcgtgaaagc ttgatgcgcg ccccctcgac gaggttaccg gtgccaagtc cgataccgtg
     2701 cgcccgttcc cgcgccgcgc gcagcgcgtc gacgataccc tcgtgcaggc gataatccgc
     2761 ctcgtccgtg cgctgcacct cttcttccaa gagctcgaga tacgtcgcga ggctcgccat
     2821 gatcgcggcc tcggtcggtt cgataccgag cgtggtgagc gcttggcgcg cgatctgttt
     2881 gtcggtcagg ccgtcgaagc gaaaattgca cgcgtcggcg ctgccgtagc gcgcgaacgt
     2941 gcgttccatc gcgcggcggc cggcgtgacc ggtcgtgagc agcgtgccgt cgatgtcgaa
     3001 gaggaggacg gtggggcgca tcgaagcgat gagcctagcg cggaacgctc agttcgcctg
     3061 cgaggctaac gagtgggcgc tcagcgaagc ggacgcgagc ggattggcgt tcgtgatggc
     3121 cgtgccgatt tgtgccggtt ggctcgaagt cgtgacgccc gagagcatgg cgactggcag
     3181 tgcgtagacg gtaaaacgat agacgtgatc cttgccgctc ggacatggcc ctgcgtagcc
     3241 gttgccttga aatgactttt gctttgcgcc ggcgggcatg gccggcatag ccatgtcatc
     3301 gagcttggcg ggcaacgccg tgacactcgg cgggatatcc cagatgaccc agtgagtcat
     3361 catgttagaa gtatcgaaca ggaccaccgc gtaactcatg gtgccattcg gtccggccgt
     3421 ccatgtcaga tccggcgaat cgtccgccgt cgacgcgcac gtgttctgat cgggaaacat
     3481 cccgccctcc atgatcacgc tgctcgtcag cgtcatcgag ccgatgcccc ccgttccgcc
     3541 atttcccccc gcgctcctgc cgcccgcagc ggcaccaccg gcgcccgtcc cgctcgtgcc
     3601 cgaaccagcg ctaccactcg cgccgctcat ccctccgcgg ccctgccctc ccgcgctcgt
     3661 accggccccg ccggtcgtgc cacgaccact cgcaccagcc gtgctgccgg cgtgtccgcc
     3721 ttggccgcca gtggagccac cactgccgcc ttgtcccgca ttcgtggtcg cgccgccgct
     3781 accacccgtc gcagtgctgc caccggaacc accagtgccc gcggcggtgc tcgccatgcc
     3841 ggcggagccg ctcgtcgtgc caccggtgcc tgccgccgtg ctcgtcgtgc cggagcctcc
     3901 gccggtgcct gct
//
LOCUS       DATIML010000616         3817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3875347, whole genome shotgun sequence.
ACCESSION   DATIML010000616 DATIML010000000
VERSION     DATIML010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3875347"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..1046
                     /locus_tag="VLJ38_10565"
     CDS             135..1046
                     /locus_tag="VLJ38_10565"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSU40006.1"
                     /translation="MARPIPCKSWLFLLLLLAQCEQKTETPASTAAPPATSAAPAKAP
                     SAAPTASETASASATAASSAAPAPDRTPPADAIKTKSGLSMLVLTKGTGKKHPKATDI
                     VRARFTGWTPTGRPFGGNEPSLLTLAQEPPGWSEALTAMVEGDKRRVWMPPALAYGNA
                     PGAPNEALVLDLELISIVEPPKAPADVKQPPKDATKLPSGLAYKILQKGSGTGHPTAT
                     SRVTMHYTGWTKAGKMFDSSVLRGAPLTIGLNQVIPGWTQGVPMMVVGDKMRLWIPAA
                     LAYGEKPPRPTDPAGDLVFDLELIAFH"
     gene            1135..1557
                     /locus_tag="VLJ38_10570"
     CDS             1135..1557
                     /locus_tag="VLJ38_10570"
                     /inference="COORDINATES: protein motif:HMM:NF017897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mpo1-like protein"
                     /protein_id="HSU40007.1"
                     /translation="MRARLDEYERFHRSGANELCHFLGIPSIVVGAAGLLALVHVARM
                     PAGYLTLAELVAGAIVIFYVASARWLGVVTGALLAALVLVGRALPWTLGLALFAGGWA
                     LQFLGHAVYEKRSPAFLRNLLHLLVGPAWLVERAFGRI"
     gene            1593..2069
                     /locus_tag="VLJ38_10575"
     CDS             1593..2069
                     /locus_tag="VLJ38_10575"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HSU40008.1"
                     /translation="MTYDALVLLGCRITPGALPAAAERRVARAARAFEARLAPRIVVS
                     GGRAWEGLTEADRLARELVHRGVPESALLLERTSLTTRDNARCTARLLAPLGVRRIGL
                     VTCDWHLGRALWSFQREGFDVEGVAALSPPLPAHRRALRSLRERGAWLLDRARAAV"
     gene            2192..>3817
                     /locus_tag="VLJ38_10580"
     CDS             2192..>3817
                     /locus_tag="VLJ38_10580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40009.1"
                     /translation="MTDVTRLRDLASAEQRRASGAVNATDLTSHDVRLRRAAARALAR
                     IADERAGELLAASLGDEDPEVVTWSAYGLGATCQGHEDSNVRALVVRATAVLLERAER
                     HAPAPSAPAPLFDVLSTLALALGRCGGPDAEHTLRAWLELGAPLREAAGFALGTLAGA
                     RDRLEDATLVALLDAASRQEAPVASAFQPFTRLSHLDDTVQARLHEVARRALAKNGLG
                     RALALRALPAAGARAVPDLAAVVGAPTASPAERADAARGLGRLGDEGQRALAEALAPL
                     VDELAGSTPERLLGPEYGVLSTLIGALKPPPDRAGPALAHLANLTVGTTPALARRSVS
                     LRCAAAALLAGRGSQSSVLAGCDPDPNGRAGRLARLAVLDRGALAGERLRQWQALSTA
                     DDAVVRERSLELAAKHDELDVTSALTRAFAAKTAGEVATAAHLVAEHPERASTTRSAE
                     APAPGVTQALTTALEHWDTSPNIEVRTNLFDAAARLGVLTAKPRLEVACRSDNPTLRD
                     HAERALRLLGDRDRHCTTFDPPAAPPAELARALG"
BASE COUNT          536 a         1401 c         1313 g          567 t
ORIGIN      
        1 aaatcttctc cgtggcgacg tcggtgaaga ggctcgtgat cccgagcagg atgacggcgc
       61 ggggtaaagc gcgggaaacg cgggccacgc cgcacgattg cttggcccgc gtgggtcgtc
      121 cacaatcgcg cgccatggcg cgaccgatcc cctgcaagtc ctggctcttt ctgttgctgc
      181 tgctcgctca gtgcgagcaa aagacggaaa cccccgcctc gaccgcggcg ccgcccgcga
      241 ccagcgcagc acccgcgaaa gccccgtccg ccgcgcccac cgcgagcgag acggcaagcg
      301 ccagcgccac cgcggcgtcc tcggctgcgc cggcaccgga tcgcacgccg cccgccgacg
      361 cgatcaaaac gaagagcgga ctttccatgc tcgtgctcac gaagggaacc ggcaagaagc
      421 atcccaaagc gacggacatc gtgcgcgctc gcttcacggg ctggacaccg accggtcgtc
      481 ctttcggcgg taacgagccg tcactgctca cgctcgccca agagcccccc ggttggagcg
      541 aagcgctcac cgcgatggtc gaaggcgaca aacggcgcgt gtggatgccg ccggcgctcg
      601 cctacggcaa cgcgccgggt gcgccgaacg aagcgctcgt cctcgatctc gagctcatct
      661 ccatcgtcga accgcccaaa gcaccggcgg acgtgaagca gccgcccaag gacgcgacga
      721 agctgccatc cggcctcgcc tacaaaatct tgcaaaaagg cagtggcacg gggcatccga
      781 cggccacgag ccgcgtcacg atgcactaca cgggctggac gaaggcgggg aaaatgttcg
      841 atagctccgt gctacggggc gcgccgctca cgatcggttt gaaccaagtc attccaggct
      901 ggacccaggg cgtcccgatg atggtggtcg gcgacaagat gcggctctgg atcccggcgg
      961 cgctcgctta cggggagaag ccgccacggc cgacggaccc cgcgggcgac ctcgtgttcg
     1021 atctcgagct catcgcgttt cactgattcg agcgcgttct tatccgagct gctgtcccga
     1081 cccagcacgc gctacactcg cggccgggcc atgcggtttt tcgtgcctcc cccgatgcgc
     1141 gctcgcctgg acgagtacga gcgttttcat cgctcgggcg cgaacgagct gtgtcatttc
     1201 ctcggcatac ccagcatcgt cgtgggggcg gcggggctct tggcgctcgt ccacgtcgcc
     1261 cggatgccgg ctgggtattt gacgctcgcg gagctcgtgg ccggagcgat cgtgattttt
     1321 tacgtggctt cggcgcgctg gctcggtgtc gtgacgggcg cgctgctggc ggctttggtt
     1381 ttggtgggac gcgcgttgcc gtggacgctc gggctcgcgc ttttcgccgg cggttgggcg
     1441 ctgcagtttt tggggcacgc cgtgtacgag aagcgctcgc cggctttcct gcggaacctg
     1501 ttgcacctgc tcgtcggtcc cgcgtggctc gtcgagcgag cgttcggccg gatctagctg
     1561 cgagcttggt gggatcgcta aacttgagtt cagtgaccta cgacgcgctc gtgctgctcg
     1621 gatgtcggat cacgccgggc gcattgccgg cggctgccga gcgccgggtc gcgcgtgcgg
     1681 cgcgggcgtt cgaggcgaga cttgcgccac gcatcgtcgt gagcggcggt cgagcttggg
     1741 aggggctcac ggaagccgac cgtctcgcgc gcgagctcgt gcatcgcggc gtgccggaaa
     1801 gcgcgctctt gctcgagcgg acgtcgctca cgacgcgcga caacgcgcgc tgcacggcgc
     1861 gcttgctcgc gccgctcggc gtgcgccgca tcggactcgt cacctgcgac tggcatctcg
     1921 gacgcgcgct ctggagtttc cagcgcgaag ggttcgacgt ggagggcgtc gcggcgcttt
     1981 cgcctccgct gccggcgcac cgccgcgcct tgcgctcgct gcgtgaacgg ggcgcatggc
     2041 tgctcgaccg cgcgcgggcg gccgtctgaa gatgcggtgt tcacggcacg tttcagggtg
     2101 gtgcgcggga ctgctcgtgc tcgcgtgtca cggctcgcca ccggcgccgc tggcgagctc
     2161 gagtgcgcaa cggagcgccg ccgcgccgcg aatgacggac gtgacccgcc tacgcgatct
     2221 cgcgagcgcc gagcagcggc gggcgagcgg cgccgtcaac gcgacggatc tcacgagcca
     2281 cgacgtccgg ctgcgccgcg ccgccgcgcg cgccctcgcg cgtatcgccg acgagcgcgc
     2341 gggtgagctc ctcgcggcga gcctcggcga cgaagatccc gaggtcgtca cctggtccgc
     2401 ttacggcttg ggcgcgacgt gtcagggcca cgaagactcg aacgtgcgcg cgctcgtcgt
     2461 ccgcgcgacg gccgtcttgc tcgagcgcgc cgaacgccat gcgcccgcgc cgagcgcccc
     2521 ggcgccgctc ttcgacgtgc tgtcgacact tgcactcgcc ctcggccgct gcggcgggcc
     2581 ggacgccgag cacacgctcc gcgcctggct cgagctcggc gcgcccctgc gcgaagccgc
     2641 gggattcgcg ctcggcacgc tcgccggcgc gcgcgaccgc ctcgaggacg cgacgctcgt
     2701 cgcgctgctc gacgccgcca gccgccagga agcacccgtc gcgagcgcgt tccagccctt
     2761 cacgcgcctg agccacctcg acgataccgt ccaggcgcgg ctccacgagg tcgctcgccg
     2821 cgcgctcgcg aagaatggac tcggcagggc gctcgcgctt cgcgcgctcc ccgcggcggg
     2881 cgctcgcgcc gtaccggatc tggccgccgt cgtcggcgca ccgaccgcat cacccgccga
     2941 acgtgccgac gccgcgcgtg gactcggccg actcggcgac gagggccagc gcgcactcgc
     3001 cgaagcgctc gcgccgttag tcgacgagct cgctgggtcg actccggagc gcctgctcgg
     3061 ccccgaatac ggcgtacttt ccacgctgat cggcgccctc aaaccgccgc ccgatcgtgc
     3121 cggcccggcg ctggctcacc tcgcgaatct caccgtcggc acgacgccgg cgctcgcgcg
     3181 ccgcagcgtc tcgctccgtt gcgcggcggc cgcgctcctc gcgggacgcg gcagccaaag
     3241 cagcgtgctg gccggctgcg atccggatcc gaacggccgc gccggccgcc tggcacggct
     3301 cgctgtgctc gaccgaggcg cgctcgcggg cgagcgcttg cgacagtggc aagccctgag
     3361 cacggccgac gacgccgtcg tccgcgagcg ctcgctcgag ctcgcggcca aacacgacga
     3421 gctcgacgtg acgagcgcgc tcacccgtgc gttcgcggcg aaaacggcgg gtgaagtcgc
     3481 gacggcggcg catctcgttg ctgaacaccc cgaacgcgcg tccacgacgc gcagcgccga
     3541 ggctccagcg cccggcgtga cacaggcact caccaccgcg ctagagcact gggatacgtc
     3601 cccgaacatc gaagtgcgca cgaacctctt cgatgcggct gcgcgcttgg gcgtcctcac
     3661 cgccaagcct cgactcgagg tcgcgtgtcg gagcgacaac ccgaccctgc gagaccacgc
     3721 cgaacgcgcg ctccgcctcc tcggtgatcg cgatcggcac tgcacgacct tcgatccacc
     3781 cgcggctcct ccggcggagc tcgctcgcgc gctcggc
//
LOCUS       DATIML010000617         4535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1568811, whole genome shotgun sequence.
ACCESSION   DATIML010000617 DATIML010000000
VERSION     DATIML010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4535
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568811"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..578)
                     /locus_tag="VLJ38_10585"
     CDS             complement(<1..578)
                     /locus_tag="VLJ38_10585"
                     /inference="COORDINATES: protein motif:HMM:NF019255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1587 domain-containing protein"
                     /protein_id="HSU40010.1"
                     /translation="MLGKPSRALLGCACALALGCTGTVTVPAPGAGGQGGSASNTSGT
                     AGAAAKSSGGTTNGGSGTTSGSSGTTNDPTAAACAQQTGSALHVGRSRLSRLTRTQLD
                     HTLRDLLGVAGSPSSALTPDESVGPFASNALAVVTDLIVLQHQELAAKVALDAQSRMA
                     KITPCDLASGDACVKTFITTFGAKAYRRPLLD"
     gene            complement(823..3300)
                     /locus_tag="VLJ38_10590"
     CDS             complement(823..3300)
                     /locus_tag="VLJ38_10590"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HSU40011.1"
                     /translation="MQEPPPSAEPADPSGPSSRRERVLRILKWSGLAVLVALVAALLA
                     IVLVVRHYQAGLPSVAELKRYHPPEVTRVLARDGTVLASIFVERRTVVPFSEIPQHVK
                     LAFLAAEDASFYEHRGLNYLGMLRAVAVNLRAGHTKQGASTITQQVIKNVVLTSDRHY
                     ERKIKETILARELERTLGKDEILELYLNQIYLGHGRYGIEEASRYYFGKKVRDIDLAE
                     AATLAGLVASPERFSPRRDEARSLERRHYVLAQMLEKGFVTRELYQQAYDAPLRLAPV
                     SDGESDLAPEAVSYALSQLAALAGKDKADATGHEAAPAAHLVTTTIDPMLQAAARKAV
                     RDALDAYAHRQKLEAPFTAETRRLWGKPATVPPKPNKAAVGHVLAVHDDAGAVDIDVG
                     GAHCRALILREERFNPKHLPPSEFTKVGALLRVVFDTEPAPSADAPPVPCHLALGPEA
                     ALVAIDVRTREVRALIGGYEAVAGGLDRATQSRRQPGSAFKPFLYSFALSSRRFTPAS
                     VLTLPNVAHPGHPALLTDAGVPAPNRTLTLRSAIAQSDNDAAQFLLKEVGAPNVVTWA
                     HALGIESELQPTLSLALGAYEVTPLELVNAIATFAAGGELEPPKLLLSVQGVDLDAVR
                     ARVPKHRVLSPEEAYLTTSLLESVVERGTGQRARTLKRPVAGKTGTTNGAKDAWIVGF
                     STELVAGVWVGYDEPLPLGWGEAGAATALPAWVSFMKAAHEGHPVTDFPRPGGIVTLH
                     VDPATGLLAYPGQTDGVDEEFLAGTEPATVASPDAGAADALDAGTDDESAEGKTPLGD
                     TPDGTHGADTSTHGVRDAGATAEVAPF"
     gene            complement(3300..4376)
                     /locus_tag="VLJ38_10595"
     CDS             complement(3300..4376)
                     /locus_tag="VLJ38_10595"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40012.1"
                     /translation="MRPKDPFIGREILSGQFRVLEKIGTGGMGSVYKASQPAMNRMVA
                     IKILHPKLAGRKDLTSRFRREARAMSQLTHPNTAKVFMYGEAEEDGSLYIVMEFLEGK
                     NLNQTVRKEGPMQPERAIPILIQVCGALQEAHDLGIVHRDLKPENIFLSKQGGIQDYP
                     KVLDFGLAKVTERQMQPGSVILTQEGMVFGTPEFMSPEQAQGRVLDARSDIYSLAVIL
                     YEVLTGKLPFTARTPMEYIQKHVMEPAIPLNERVPERKFAKGLEDVLALALKKKPDER
                     YQSAAEFGEALRPYGGATAASLPAIRIAGPQVVVEQPGFTNSEAPTVAKKGPSGLGLL
                     VGVAVACLLGGVIIAIIVMRAVGH"
BASE COUNT          668 a         1482 c         1609 g          776 t
ORIGIN      
        1 tcgtcgagga gcggacgccg gtacgccttg gcgccgaagg tcgtgatgaa cgttttgacg
       61 cacgcgtcgc cggacgcgag atcgcacggc gtgattttcg ccatccggct ctgcgcgtcg
      121 agcgccactt tggcggcgag ctcttggtgt tgtaggacga tgagatccgt gacgacggcg
      181 agcgcgttgc tcgcgaaggg tcccacgctt tcgtcggggg tgagcgcgga ggacggacta
      241 cccgcgacgc caagcaggtc gcgcagcgtg tgatcgagct gagtgcgggt gagccggctc
      301 agccgcgagc ggccgacgtg gagcgcggaa ccggtttgtt gggcgcacgc tgccgccgtg
      361 gggtcgttcg tggtgccact cgagccgctc gtcgtgccgg agccgccgtt cgtggttcca
      421 ccgctgctct tcgcggcggc gccggccgtg ccgctcgtgt tgctcgcgct gccgccctgg
      481 ccgcccgcgc cgggggccgg cacggtgacg gtgcccgtgc agccgagcgc gagcgcgcaa
      541 gcgcaaccga gcagagcacg cgaaggtttg ccgagcatgc cgcgaaccca cgagaatacg
      601 ccgccggacc tcgctccggc aacgtcagag ccccatgatt tgcggcattc tgagcaaatc
      661 ggtgcgaccc gaacgcacac cgtgcccgcg catcggcagc gagagagcac tatttcgccg
      721 agctcgaaat gcgcgctcga ccgcgtggaa cggctcgagc gagcgacgtc gaccgcgccg
      781 aacgctggtc gccccaagat ccaatcaact cggagtgatt cgctaaaacg gcgccacttc
      841 cgccgtcgcc cccgcgtcgc gcacgccgtg cgtcgacgta tcggcgccgt gcgtcccgtc
      901 cggcgtgtcg ccgagtggcg tcttgccttc ggcgctttcg tcgtcggtgc ccgcatcgag
      961 cgcgtccgct gcacccgcgt cgggtgacgc cacggttgcg ggctcggtgc cggcgagaaa
     1021 ctcttcgtcg acgccgtcgg tttgacccgg gtaggcgagc aggccggtcg ccggatcgac
     1081 gtggagcgtg acgatgccgc cgggtctcgg aaaatcggtc acggggtggc cttcgtgcgc
     1141 ggctttcatg aagctcaccc acgcgggtag cgcggtcgcg gcgccggcct caccccagcc
     1201 gagcggcagc ggctcgtcgt agccgaccca cacgcccgcg acgagctcgg tggaaaagcc
     1261 gacgatccaa gcgtctttgg cgccgttcgt cgtgcccgtc ttgcccgcca ccggccgttt
     1321 gagcgtgcgg gcgcgctggc ccgtgccgcg ctcgacgacg ctttcgagca ggctcgtcgt
     1381 cagatacgcc tcttcgggcg acagcacgcg gtgcttcggg acgcgcgcgc ggactgcgtc
     1441 gagatcgacg ccctggacgc tcagcaagag cttcggcggc tcgagctcgc cgcccgccgc
     1501 gaaggtggcg atcgcgttga cgagctcgag cggggtcact tcgtacgcgc cgagcgcgag
     1561 cgagagcgtc ggctggagct cggattcgat gccgagcgcg tgcgcccagg tgacgacgtt
     1621 cggtgcaccg acttctttga gcaagaattg ggcggcgtcg ttgtcgcttt gcgcgatggc
     1681 gctccggagc gtgagcgtgc gattcggcgc cggcacaccc gcatccgtga gcagcgcggg
     1741 gtgacccggg tgcgcgacgt tcggcagcgt gagcacgctc gcgggcgtga agcggcgcga
     1801 cgaaagcgca aagctataga ggaacggctt gaacgcggag cccggctggc ggcgcgactg
     1861 ggtcgcgcgg tcgagtccgc ccgccacggc ctcgtaaccg ccgatcaggg cgcgcacctc
     1921 gcgcgtgcgc acgtcgatgg caacgagcgc ggcttcgggg ccgagcgcca ggtgacacgg
     1981 cacgggcggc gcgtcggctg agggcgcggg ttcggtgtcg aacacgacgc gcaggagcgc
     2041 gccgactttg gtgaactcgc tcggcggcag gtgcttcggg ttgaagcgct cttcgcggag
     2101 tatgagcgcg cggcaatgcg cgccgcccac gtcgatgtcg acggcgcccg cgtcgtcgtg
     2161 cacggcgagc acgtgaccga cggccgcttt gttcggcttg ggcggcaccg ttgccggctt
     2221 gccccagagc ctgcgcgtct cggccgtgaa gggcgcttcg agcttctgcc ggtgcgcgta
     2281 ggcgtcgagc gcgtcgcgca cggctttgcg agcggcggct tgtagcatcg ggtcaatcgt
     2341 cgtcgtcacg aggtgcgccg ccggtgcggc ttcgtgtccg gtcgcgtccg ctttgtcctt
     2401 gcccgcgagc gcggcgagct gcgaaagcgc gtaagaaacc gcctcgggcg ccagatcgga
     2461 ctcaccgtcg gagaccggcg cgagccggag cggcgcgtcg tatgcctgct ggtaaagctc
     2521 gcgcgtgacg aagcccttct cgagcatttg cgcgagcacg tagtgacggc gctcgagcga
     2581 gcgcgcttcg tcgcgacgcg gcgagaagcg ttccggtgac gcgacgagcc ccgcgagcgt
     2641 cgccgcttcg gcgagatcga tgtcgcgcac tttcttgccg aaatagtagc ggctcgcctc
     2701 ctcgatgccg taacggccgt ggccgaggta aatctgattc aggtagagct cgaggatctc
     2761 gtccttgccg agggtgcgct cgagctcgcg cgcgaggatg gtctctttga tcttgcgctc
     2821 gtagtggcgg tcggacgtga gcacgacgtt cttgatcacc tgctgggtga tggtcgaagc
     2881 gccttgcttg gtgtgacccg cgcgcaggtt cacggcgacg gcgcgcagca tgccgaggta
     2941 gttgagtccg cggtgttcgt aaaagcttgc gtcctcggcc gcgaggaacg cgagcttgac
     3001 gtgctggggg atttcgctga acggcacgac cgtgcgccgc tcgacgaaaa tgctcgcgag
     3061 cacggtgccg tcgcgcgcga gcacgcgcgt cacctcgggc gggtggtaac gcttgagctc
     3121 ggcgacgctc ggcaaccccg cctggtagtg ccggacgacg agcacgatcg cgagcagcgc
     3181 tgcgacgagc gcgacgagca cggccagacc cgaccacttc aggattcgaa gcacccgctc
     3241 gcgtcgcgag ctcgggccgc tcgggtcggc gggttccgcg ctgggcgggg gctcttgcat
     3301 cagtgtccga cggcgcgcat cacgatgatc gcgatgatca cgccgccgag taggcatgcc
     3361 acggccacgc ccacgagcaa tccgagcccg ctcgggccct ttttggcgac ggtaggcgct
     3421 tcactgttcg tgaagcccgg ctgctcgacg acgacttggg gccccgcgat gcgaatggcc
     3481 ggcaacgacg cggccgtcgc gccaccgtac ggcctgagcg cctcgccgaa ctcggccgcg
     3541 gattggtaac gctcatccgg cttcttcttg agcgcgaggg cgagcacgtc ctcgaggccc
     3601 ttcgcgaatt tgcgctcggg gacgcgttcg ttcagcggga tggccggctc catcacgtgc
     3661 ttttggatgt attccatcgg cgtgcgagcc gtgaacggga gcttgcccgt gagcacctcg
     3721 tacaggatga cggcgagcga gtagatgtcg ctgcgcgcgt cgagcacgcg accttgcgct
     3781 tgctcgggtg acatgaactc gggcgtgccg aagaccatgc cttcctgcgt gaggatcacg
     3841 ctacccggct gcatctgccg ttcggtgact ttcgcgagcc cgaagtccag aaccttcgga
     3901 taatcctgaa tgccgccctg cttcgagagg aagatgttct cgggtttgag gtcgcggtgg
     3961 acgatgccga ggtcgtgggc ttcttgcagc gcgccgcaaa cctgaatcag gatcgggatc
     4021 gcgcgctcgg gctgcatcgg gccttccttg cgcacggttt gattcaggtt cttgccctcg
     4081 agaaattcca tcacgatgta gagcgagccg tcctcttcgg cctccccgta catgaacacc
     4141 ttggcggtgt tcggatgggt gagctggctc atggcgcggg cttcacgccg aaagcgcgag
     4201 gtgagatctt tgcgacccgc gagcttggga tggaggatct tgatcgccac catccggttc
     4261 atggccggct gggacgcctt gtagacggag cccatcccac ccgtgccgat cttctccagg
     4321 acgcggaact gcccgctcag gatctcacgg ccgatgaacg ggtctttggg gcgcatccga
     4381 tcacgatcga taccaaaatt acccggagcc tcccaggcgg aagcgcccgg ccacgttcgc
     4441 ctcagcgcgc gagcgacagg atcgtgtcgc cgctggccgg atccagcacc gaaaactcgc
     4501 tgtgcccgtc ggtcgcagct acacgcacct cgtgt
//
LOCUS       DATIML010000618         4696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_124397, whole genome shotgun sequence.
ACCESSION   DATIML010000618 DATIML010000000
VERSION     DATIML010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4696
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124397"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1059)
                     /locus_tag="VLJ38_10600"
     CDS             complement(<1..1059)
                     /locus_tag="VLJ38_10600"
                     /inference="COORDINATES: protein motif:HMM:NF012925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 16 glycosylhydrolase"
                     /protein_id="HSU40013.1"
                     /translation="MNRFALASLSSLCLLGALLPARVASATKSAEFYTSKAYPYGRFE
                     ARMRVAAGDGVVSAFFLWKDGSEQAGTFWNELDYEKIGATCQLQTNALFGNPSVNHTQ
                     KPTVSADLCGDFHVYAYEWTADYISWSLDGKEIRRETGDIAAAYAQNVPAGMQLHFNI
                     WPGDSSFGGNFSPSILPVHQYIDWVQYSAYANGAFTLSWREDFTAATAPSGWQTGDWG
                     SPKNLSTHDPRNVNFLGGYAVLSLTSDDATGPAGAMSGPDTGTAGMGAGGAGTSGGGG
                     IAGTAAGASAGGTTGTAGTPAAGGSSGTPAAAGTSASGAAGGTGGTSATGGTTATGGT
                     TATAGTTAVGGTSGTAATT"
     gene            1687..3453
                     /locus_tag="VLJ38_10605"
     CDS             1687..3453
                     /locus_tag="VLJ38_10605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnogalacturonan lyase"
                     /protein_id="HSU40014.1"
                     /translation="MERLTRGVVAVPVSGGVYVGWRMLGFEYDAANPANVAYSVYRDG
                     THLATVADSTNYLDAGGTASSKYSVRVVLGGVEGAASEQVSPWAQNYLRVPLSVPPGG
                     NTPSSCDTPNEAYTYSANDASAGDLDGDGNYELILKWDPSNSHDNSQAGCTGDVYLDA
                     LELDGTRLWRIDLGPNIRAGAHYTQFIVYDFDGDGKAELAVKTAPGTKDGTGKFLSLG
                     PAANDDDSKAYRQSDGYVLSGPEYLTVFSGLTGAELATVDFDQARGTVSSWGDDYGNR
                     VDRFLATAAYLDDTGEPSFVMARGYYTRTTLTAWNFRGGKLSQLWKFDSNVTASDAAK
                     HPYSGQGAHSLSVANVDDDLGQEIVYGAMVIDNDGKGKCSTGYDHGDALHVGDFVPTH
                     PGLEYFMVNEDGNHPSYHLTDPKTCAPIVDGPVVADQDTGRGDADDILSSNPGAEMWA
                     AGANKDLYSATTGMKVGSPPSSINFLIWWDADETRELEDGTTISKYGGSSLLNCSPCA
                     SNNGTKSTPALTADLFGDWREEVVWRESNNAALRIYTLMHDPQYRVAIAWQNTAYNQP
                     PHPSFAIGNGMAAPPLPNILVK"
     gene            complement(3463..4062)
                     /locus_tag="VLJ38_10610"
     CDS             complement(3463..4062)
                     /locus_tag="VLJ38_10610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40015.1"
                     /translation="MLAVSSQAARAHEPFQITTEARTLPAGLVLHVTLASRTATLACP
                     SAVGAIRSLTSLDLERYRAGLDACARGLYVVRSAGRVLEPLAADVRLTEEGDFDARLR
                     YAPAAPGLLTLEAVHLARLPDAMYGAELTVTSERDFVGQALLRRASPVLSVHVPQSAA
                     PDPARAPRKLSFFDYRLVGALVTFAAFVASVVWLLRKRT"
     gene            4279..>4696
                     /locus_tag="VLJ38_10615"
     CDS             4279..>4696
                     /locus_tag="VLJ38_10615"
                     /inference="COORDINATES: protein motif:HMM:NF037627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU40016.1"
                     /translation="MSQLALAIRVETTTRHLSYVENGRSRPGRDLVLRLAQALDLPLR
                     ARNELLVAAGLPAEFPANGLESVPLAPYRRAIAGVIAALDPFPAFVIDPLFNLEQTNA
                     MGRRLLPVQPGAPANLLDAFLAPGPARALLENFAELA"
BASE COUNT          808 a         1622 c         1559 g          707 t
ORIGIN      
        1 cgtcgttgca gcggtcccgc tcgtgccgcc gacggccgtc gtgcccgccg ttgcggtcgt
       61 gccgcctgtc gcggtcgtgc cgcctgtcgc gctcgtaccg cccgtcccgc cggctgctcc
      121 gctcgcgctc gtccctgccg cggctggagt gccactactg ccgcccgcag cgggcgtgcc
      181 cgcagtgccc gtcgtcccgc ccgcactcgc tccggcagcg gttccagcaa tcccaccacc
      241 gccgctcgtc ccggcgccgc ccgcgcccat gccggccgtt cccgtgtcgg ggccggacat
      301 cgcgcccgcg ggacccgtgg catcgtcgga ggtcaacgag agcacggcat agccgcccag
      361 aaaattcacg ttgcgcgggt cgtgcgtcga gaggttcttc ggtgaacccc agtcgcccgt
      421 ctgccagccg ctcggcgccg tcgcggccgt gaaatcctcg cgccagctca gcgtgaacgc
      481 gccgttcgcg taagcggagt actgaaccca gtcgatgtac tgatgcaccg gcaggatgct
      541 cgggctgaag ttgccgccga acgaggaatc acccggccag atgttgaaat gcagctgcat
      601 gccggcgggc acgttctgcg cgtacgcggc cgcgatatcg ccggtctccc ggcggatctc
      661 cttgccgtcg agcgaccagg agatgtagtc cgccgtccac tcgtaggcgt agacgtgaaa
      721 gtctccgcac agatccgcgc tcaccgtcgg cttctgggtg tggttgaccg acggattacc
      781 aaacagcgcg ttggtctgaa gttggcaggt cgcgccgatc ttctcgtaat cgagctcgtt
      841 ccagaaggtg cccgcctgct cggagccgtc tttccagagg aagaacgcgc tgacgacgcc
      901 gtcaccggcc gcaacgcgca tgcgcgcctc gaagcgaccg tacgggtacg ccttgctcgt
      961 gtagaactcc gcgctcttcg tggcggaggc gacacgggcg gggagcaggg cgcccaggag
     1021 gcaaagcgac gaaagcgacg ccagcgcgaa cctattcatc gagaagtaga taccctccgg
     1081 gcagagacca gactttgcgt ttcttgggga atcaggggca gccccaaaaa tccgaccgac
     1141 cggcggcgcg ttgcgtaacc ttcggaagtt ggcgtcgacc tcgagtccca ggatttttac
     1201 atgaccgttt ggcgtctagg tgttcgctcc agttggctgc tcggcactgg cttggtgatc
     1261 ctgagctgcg gcaccaaaga cagcggcggc ggcgcctccg gcggagacac gtcgagcggc
     1321 ggccgcggcg cagcgcctgc ttcgggtgga aacggaatgc ttggtggctc gggaggcacg
     1381 ctgcacacgg gcggcactgg tcagagctcg ggcggcgcag caggtagccc gacgagcggg
     1441 ggcacaggtg ggactacctc gacgggaggc tcgaactcga cgggaggctc gaactcgacg
     1501 ggaggctcca tgacggccgg aacgaccgcg gctgcaggaa caactgccgc aggaggccga
     1561 ggtccagcag cgggcggcgc acctgcaagc ggaggaagga cgagcgcggg cagcgcggga
     1621 acggcaccgc acggtggcgc cggcgcgggc ggttcagcgc caacgggcgg cagcggcttt
     1681 tatcacatgg aacggctgac ccgaggcgtc gtcgcggttc ccgtcagcgg cggcgtgtac
     1741 gtcggctggc gcatgctcgg cttcgagtac gacgcagcga accccgccaa cgtcgcctat
     1801 tcggtttacc gcgatgggac gcacctcgcg accgtcgccg acagcacgaa ctacctcgac
     1861 gccggaggca cggcgagctc gaagtacagc gtgcgcgtcg tgctcggcgg agtcgagggc
     1921 gccgcctccg agcaggtgtc tccctgggcg cagaactacc tgcgcgtccc gctcagcgtg
     1981 ccgcccggcg gcaacacgcc gtcgtcctgc gatacgccga acgaggcgta cacctacagc
     2041 gccaacgacg cgagcgcggg tgacctcgac ggtgacggca actacgagct catcctcaag
     2101 tgggatccct cgaactcaca cgacaactcc caggcaggct gcaccggcga cgtctacctc
     2161 gacgcgctcg agctcgacgg cactcgcctc tggcgcatcg acctcgggcc gaatatccgg
     2221 gccggcgcgc attacacgca gttcatcgtt tacgatttcg acggcgacgg caaagccgaa
     2281 ctggccgtca aaacggcccc cggcaccaag gacggcaccg ggaaattctt gagcctcggc
     2341 cccgccgcga acgacgacga cagcaaagcg taccgtcagt cggacggcta cgtgctgtcc
     2401 ggtcccgagt acctcaccgt gttcagcggg ctcaccggtg ccgagctcgc gacggtggat
     2461 ttcgatcagg cgcgcggcac ggtgagctct tggggcgacg actacggcaa ccgcgtcgat
     2521 cgcttcctcg cgacggccgc ctacctcgac gacacgggcg agccgagctt cgtgatggcg
     2581 cgcggctact acacgcgcac gacgctcacg gcttggaatt tccgaggggg caagctgagc
     2641 cagctctgga aattcgacag caacgtgacc gctagcgatg cggcgaagca cccctacagc
     2701 ggtcagggtg cgcactcgct ctccgtcgcc aacgtcgatg acgatctcgg gcaggagatc
     2761 gtctacggcg ccatggtcat cgacaacgac ggcaagggta aatgctcgac cggctacgat
     2821 cacggcgacg ccctccacgt cggcgacttc gtgcccacgc acccggggct cgagtacttc
     2881 atggtcaacg aggacggcaa tcacccgagc tatcacttga ccgacccgaa gacgtgcgcg
     2941 cccatcgtcg acgggcccgt ggtcgccgat caagacaccg gccgtggcga cgccgacgac
     3001 atcttgtcga gcaacccggg cgcggaaatg tgggcggcgg gcgcgaacaa ggacctgtac
     3061 tcggccacga cgggcatgaa agtgggcagc ccgccgagct ccattaattt tttgatttgg
     3121 tgggacgcgg acgagacgcg tgagctcgag gacggcacga ccatttcgaa atacggcggc
     3181 tcctcgctct tgaactgcag cccatgcgcc tccaacaacg gcacgaagag cacccccgcg
     3241 ctcacggccg acctgttcgg tgattggcgt gaggaagtcg tgtggcgcga gtcgaacaac
     3301 gcggcgctac gcatctacac gctgatgcac gacccgcagt atcgcgtggc gatcgcctgg
     3361 caaaacacgg cctataacca gccgccgcat ccgagcttcg ctatcggcaa cggcatggcg
     3421 gctccaccgc tgccgaacat cctcgtcaag tgagcgcgac cgttacgtgc gtttgcggag
     3481 cagccacacg acgctggcga cgaacgccgc gaacgtgacg agcgcaccga ccagccgata
     3541 atcgaagaac gataacttac gcggcgctct cgcggggtcc ggagcggcgc tttgcggcac
     3601 gtgcacgctg agcaccggcg acgcacggcg cagcagcgcc tgaccgacaa aatcgcgctc
     3661 gctcgtgacg gtgagctccg cgccgtacat cgcgtcgggc aagcgcgcga ggtgcacggc
     3721 ctcgagcgtc agcagtcccg gtgcggcggg cgcataacgc agccgagcgt cgaagtcgcc
     3781 ctcttccgtc agccgcacat ccgccgcgag cggctcgagc acgcggccgg cgctccgcac
     3841 cacgtacaga ccgcgcgcgc acgcatcgag tcccgctcgg tagcgctcga ggtcgagcga
     3901 cgtgaggctt cgaatcgcac cgacggcgct cggacacgcg agcgtcgccg tccggctcgc
     3961 caacgtgacg tggagcacga gcccagccgg gagcgtccgc gcttccgtcg tgatctgaaa
     4021 cggctcgtgc gcgcgagccg cctggctcga aacggcgagc atgcagccaa gagcaaccgc
     4081 ggggaggcag cgacgtttgc gcggggtcgt ggtgacggcg ccggtccacg agacccctgc
     4141 gagcttcggc gcccgagagt ccataccctc gaagggtatt gcgctcggcg cgtcgcctcg
     4201 cggaaacttg cgtggatgac tccggtagga ccgagcgcgt gcgggagtct cgttcgtcat
     4261 tttcggcgcc aacgcggtat gagtcaactc gctctcgcga tccgtgtcga gacgacgacg
     4321 cggcacctct cgtacgtcga gaatggacgc tcgcggccgg gccgtgacct cgtgctccgc
     4381 ctcgcgcagg cgctcgatct gccgcttcga gcacgcaacg agctgctcgt ggcagccgga
     4441 ctccctgccg agtttccggc caacgggctc gagagcgtcc cactcgcgcc ctatcggcgc
     4501 gccatcgcgg gcgtgatcgc ggcgctcgac ccgttcccgg cgttcgtgat cgacccgctg
     4561 ttcaacctcg aacaaaccaa cgcgatggga cggcgcctgc tacccgttca acctggcgcc
     4621 cccgcgaacc tgctcgacgc gtttctcgcg cccgggccgg cgcgcgcgct gctcgagaac
     4681 ttcgccgaac tggcct
//
LOCUS       DATIML010000619         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4748564, whole genome shotgun sequence.
ACCESSION   DATIML010000619 DATIML010000000
VERSION     DATIML010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4748564"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1332
                     /locus_tag="VLJ38_10620"
     CDS             <1..1332
                     /locus_tag="VLJ38_10620"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU40017.1"
                     /translation="IEKRYIRKNGELRWGQLSFSCARDEHGRVRYIVLACSDIHEHKR
                     SLEQRAKLEGSLLQAQKLETVGRLVGGVAHDFNNRLLVIMGYADLLKRGSAHDSVLAS
                     HAEVVVSSARRAADLTRQLLAYSRRQVLRPRPSDLNAVVDGTRRMLERLIGERVELVT
                     VLGAKFPMLADPGQIEHVLMNLTLNARDAMPDGGRVTLETFDFEVTKDAAVEGLTDGA
                     YVALSVSDTGTGISEATRKHIFEPFFTTKDVGRGTGLGLATADGIVRQSGGGITLETS
                     EGHGSTFTIYLPRAVDTAAELTPSKIDKPDYVPCLPTVETILIVDDEDDVRKLLVDVL
                     RIGSYRVLEARDAEQALEVATAHGSPIDLLVTDIVMPGMTGMELADAIRARSPDLKVL
                     FMSGYAERDRIRPLRDSEQFVPKPFLPAEFYGAVDKFLHEPTAPLEQTQTA"
     gene            1550..1623
                     /locus_tag="VLJ38_10625"
     tRNA            1550..1623
                     /locus_tag="VLJ38_10625"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1584..1586,aa:Met,seq:cat)
BASE COUNT          333 a          677 c          533 g          286 t
ORIGIN      
        1 atcgaaaagc gctacatccg gaagaacggc gagctgcgtt gggggcagtt gagcttctcc
       61 tgcgcgcgcg atgagcacgg ccgcgttcgc tacatcgtcc tcgcctgtag cgacattcac
      121 gaacacaagc gctcgctcga acaacgcgcc aagctggaag gtagtctgct ccaagcccaa
      181 aagctcgaaa ccgtcgggcg tctcgtcggc ggcgtcgccc acgacttcaa caatcgtctg
      241 ctcgtgatca tgggctacgc cgacctcttg aagcgcggga gcgcccacga ctccgtgctc
      301 gcatcccacg ccgaagtcgt cgtctcgagc gcgcgccgcg cggccgacct cacgcgccag
      361 ctcctcgcgt acagccgccg ccaagtcttg cgcccgcggc cgtccgatct caacgccgtc
      421 gtcgacggca cgcgccgcat gctcgagcgt ctgatcggcg agcgcgtcga gctcgtcacc
      481 gtgctcggcg cgaaattccc gatgctggcc gatccgggac aaatcgagca cgtcctcatg
      541 aacctcacct tgaatgcgcg cgacgccatg cccgacggcg gccgcgtcac gctcgaaacc
      601 ttcgacttcg aggtgaccaa agacgcggcg gtcgaaggac tcaccgacgg cgcctacgtc
      661 gctctctccg tctcggacac gggcaccggc atttccgaag ccacgcgcaa acacatcttc
      721 gaacccttct tcaccaccaa agacgtgggg cgcggcacgg ggctcggcct cgccacggcc
      781 gatggcatcg ttcgtcagag cggcggcggc atcacgctcg aaaccagcga aggccacggc
      841 agcaccttca cgatctacct cccgcgcgcg gtcgacaccg ccgccgagct caccccttcg
      901 aaaatcgaca aacccgacta cgtcccctgt cttccgaccg tcgagaccat cctcatcgtc
      961 gacgacgaag acgacgtccg aaagctcttg gttgacgtcc tgcgcatcgg ctcctaccgc
     1021 gtcctcgaag cgcgcgacgc cgaacaagcc ctcgaagtcg cgaccgcgca cggctcgccc
     1081 atcgacctcc tcgtcaccga catcgtcatg cccggcatga ccggcatgga actcgcggac
     1141 gccattcgcg cccgcagccc cgacctcaaa gtgctcttca tgtccggcta cgccgaacgc
     1201 gaccgcatcc gcccgctccg agacagcgaa cagttcgtcc cgaagccgtt cttgcccgcg
     1261 gagttttacg gcgccgtcga caagttcttg cacgagccca cggcgccgct cgagcagacc
     1321 cagacggcgt agcaatcgcg cggcccgaca cgacgagcgg agcgtcgcgg ctcgtccgcg
     1381 tctcggcgct gcgcggtggc cggcggcacg tccgtcgtgg ttcggcgcct cgggcgcgct
     1441 atctcacggc gcgcgaaaag cccagcaaaa ccgctgaaac ttgctcagaa attctccgca
     1501 tcgagacgct tgacaacccc cccgccgcga ctaaggtacc cgcctctgac gcgcggtgga
     1561 gcagcctggt agctcgtcgg gctcataacc cgaaggtcgg aggttcaaat cctccccgcg
     1621 caactactcg cagaagacgt tgattcctcg tcccgcccgc cctggttcgc cttggcgggc
     1681 ggagtcgtga gaaggaccag cggtaggatc tccgagcgcg cgatgtagaa accgtccggt
     1741 tgcgggatag gccaatccga ccatccctga acggcggcgt agctcctcgc gtccccccgt
     1801 cacgtcggtg gtgaggcgac gctcgaggt
//
LOCUS       DATIML010000620         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2145074, whole genome shotgun sequence.
ACCESSION   DATIML010000620 DATIML010000000
VERSION     DATIML010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2145074"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1096
                     /locus_tag="VLJ38_10630"
     CDS             <1..1096
                     /locus_tag="VLJ38_10630"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HSU40018.1"
                     /translation="ITDDERIQASLPTIKKAIASGARVILASHLGRPKGERAPKYSLE
                     PAAARLSELLGQDVTLPDDCIGDAPKKVIADLRPGQVCLLENLRFHPEEEKNDEAFAK
                     ELASFTDVFINDAFGSSHRAHASVHGLARLIKDRGMGYLLKNEIQALDRVVSSPARPF
                     VAILGGAKVTDKIAVIEALLQKCDSLCIGGAMANTLLAAQGYDMKKSLYEADWLAKGR
                     TLLENARNKGVDLVLPTDLVTGTGVDATTGKVVKANAVPEGEMALDIGPESVKAFATR
                     LTNAKTIFWNGPMGLFENKAFAAGTNGIAQAVADSSGFSVVGGGDSVAAVKAAGDAVL
                     KKIGFISTGGGASLELVEGKKLPGVEALRP"
     gene            1118..1870
                     /gene="tpiA"
                     /locus_tag="VLJ38_10635"
     CDS             1118..1870
                     /gene="tpiA"
                     /locus_tag="VLJ38_10635"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014029893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HSU40019.1"
                     /translation="MRSYVIAGNWKLNYGGGEGCDLATKVAQATKGITKAKIVVAPPF
                     TVLAAVSTDLVDSHVEIAGQNLYPEDKGAFTGEISAPMLLAAGAKWVILGHSERRQYF
                     AESDDFVHKKTVAALNAGLRPIVCIGETLAEREANKTLEVVFRQLDAVTADLRTRPGF
                     GVIAYEPVWAIGTGKVATTEQAQEVHAAIRERLKSVSPELATETAVLYGGSVKADNAA
                     ALLACADIDGALVGGASLDADGFAKIARAVPA"
BASE COUNT          373 a          694 c          675 g          287 t
ORIGIN      
        1 catcacggac gacgagcgca tccaggcgtc gctgcccacg atcaagaagg ccatcgcgtc
       61 gggcgcccgc gtgatcctcg cctcccacct cggacggccc aagggcgaac gcgcgccgaa
      121 gtacagcctc gagcccgccg ccgcgcgcct gagcgaactg ctcggccaag acgtgacgct
      181 gcccgacgac tgcatcggcg acgcgcccaa gaaggtcatc gcggatctgc gccccggcca
      241 ggtgtgcctg ctcgaaaacc tccgcttcca tcccgaggag gagaagaacg acgaggcgtt
      301 cgccaaggag ctcgcctctt tcacggacgt cttcatcaat gacgccttcg gctcctcgca
      361 tcgcgcccac gcgtccgtgc acggcctcgc gcgcctcatc aaagaccgcg gcatgggcta
      421 cctgctgaag aacgaaatcc aggcgctcga ccgtgtcgtc tcgtcaccgg cgcggccgtt
      481 cgtcgccatc ctcggcggcg ccaaggtcac cgacaagatc gccgtgatcg aggcgctgtt
      541 gcagaagtgc gactcgctct gcatcggcgg cgcgatggcg aacacgctgc tcgccgcgca
      601 gggctacgat atgaaaaagt cgctctacga agccgattgg ctcgccaagg ggcgcacgct
      661 gctcgagaac gccaggaaca agggcgtgga cctcgtgcta ccgactgacc tcgtcaccgg
      721 cacgggcgtc gacgcgacca cgggcaaggt cgtgaaggcc aacgccgtcc ccgagggcga
      781 gatggcgctc gatatcgggc ccgaatccgt gaaagccttc gcgacccggc tcacgaacgc
      841 caagaccatc ttctggaacg ggccgatggg cctcttcgag aacaaggcgt tcgccgcagg
      901 cacgaacggc atcgcgcaag cggtcgccga ttcgagcggc ttctcggtcg tcggcggcgg
      961 cgacagcgtc gcggccgtga aggcggcggg cgacgccgtg ctcaagaaga tcggcttcat
     1021 ctccaccggc ggcggcgcgt cgctcgagct cgtcgagggc aagaagctcc ccggcgtcga
     1081 agcgctgcgt ccctgagcgc acggaaggaa ccgcaccatg cgctcatacg tcattgctgg
     1141 taactggaag ctcaactacg gcggcggcga aggctgcgat cttgcgacga aggtcgcgca
     1201 ggcgacgaaa ggcatcacca aggccaaaat cgtggtggcc ccgcccttca cggtgctcgc
     1261 ggccgtgagc acggatctcg tcgattcgca cgtcgagatc gccgggcaaa acctgtatcc
     1321 cgaggacaaa ggtgccttca ccggtgaaat cagcgccccg atgttgctcg cggcgggcgc
     1381 caagtgggtc atcctcggcc acagcgagcg gcgccagtac ttcgccgaga gcgacgactt
     1441 cgtgcacaag aagacggtgg ctgcgctgaa cgcgggcctc cgccccatcg tgtgcatcgg
     1501 ggagacgctc gccgaacgcg aagcgaacaa gacgctcgag gtggtctttc gccagctcga
     1561 cgccgtgacg gccgatctgc gcacgcggcc ggggttcggc gtgatcgcct acgagcccgt
     1621 gtgggcgatc ggcacgggca aagtcgcgac gaccgagcaa gcgcaagagg tccacgccgc
     1681 catccgcgaa cgcctgaaga gcgtctcgcc cgagctcgcg acggagacgg ccgtgcttta
     1741 cggcggcagt gtcaaagcgg acaacgccgc ggcgttgctc gcgtgcgcgg acatcgacgg
     1801 cgcgctcgtc ggcggcgcct cactcgacgc ggacggcttc gccaagatcg cgcgcgccgt
     1861 tccagcttag tcatggcgag cgcagaacaa cccgacacct cgccggcgca gtgcaagagc
     1921 tgtcacggca cgggtgaggt cgtgaacgaa tacggcccgg cggcttgtcc cgactgcgga
     1981 ggcgcgggtt acttgccgtc ggcgcacgtc ctcgtggaat ggcgcgcgc
//
LOCUS       DATIML010000621         3161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3591564, whole genome shotgun sequence.
ACCESSION   DATIML010000621 DATIML010000000
VERSION     DATIML010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3161
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3591564"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VLJ38_10640"
     CDS             complement(<1..597)
                     /locus_tag="VLJ38_10640"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSU40020.1"
                     /translation="MLAASLWLLLRLEPAAAATRVHALIIGNNAPFHAVGEAAPAPLH
                     YADDDAAAFAELLGELATSTELLTVMDRDTQELYPGLAARARAPTRDAVRSAVTRLAQ
                     RLREQHDAGHRTVLFFYFSGHGSVDFEGHPALALSDGGLDQAFLYEGILAQLPADEVH
                     VLIDACHAEAIVRPRDVEAEAVQVSPAQASAFLVDQTLA"
     gene            complement(635..1243)
                     /locus_tag="VLJ38_10645"
     CDS             complement(635..1243)
                     /locus_tag="VLJ38_10645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40021.1"
                     /translation="MTKLGRVSGEDSELNRLLARGRLSGAEYDAVERRIFEAITPRRK
                     RAKWPLVGSALALAAGLALWLGLGSAPSHYAEKGGSTPAGGVVGVGCPGRAPHTCRLG
                     DTLLFSVLGNTAPVYVVSYAERLDASEPSRIWYFPHADGAAPRVEVAAGTNVAPEGVR
                     LGPPHVKGRYRVKVWLSDAPVDRERATKLTEPAQSFEIDVVD"
     gene            complement(1240..1866)
                     /locus_tag="VLJ38_10650"
     CDS             complement(1240..1866)
                     /locus_tag="VLJ38_10650"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU40022.1"
                     /translation="MPLLRNDPELLAAFRAGERRALETVYRFYARPLEGYFRALGRRS
                     GVTAFSHSGAIQDLLQDAFIRAFSYAARQSYDAARDFSPYIKAIARNSFIDALRKRKH
                     EIPFEEHEAGLTLDEVRVDSDYEPEVLAALQAYLERLSPDLRGVYEQRFELGLTQEVA
                     CRTLGVSRRSLRTLEEQLRRGLRKTLALAGLLRVERPVRLDAFEPRQQ"
     gene            complement(2058..>3161)
                     /gene="glyA"
                     /locus_tag="VLJ38_10655"
     CDS             complement(2058..>3161)
                     /gene="glyA"
                     /locus_tag="VLJ38_10655"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HSU40023.1"
                     /translation="TNKYSEGYIGKRYYEGQVVIDQVEELAVSRLKQLFGAEHVNVQP
                     YSGSPANLAAYLAFCAPGDPIMGLGLPFGGHLTHGWNVSITGRYFKSVPYGLSQKDHR
                     IDLDEVRRLAREHKPKIIWCGTSAYPRTLDFSAFRGIADEVGAKLCADIAHIAGLVAG
                     GAHPSPLGIADVVTTTTHKSLRGPRGAVIMCKQAFAKDIDRAVFPGLQGGPHNHTTAA
                     IAVAAKEAMTPEFKTYATNTVANARALAEGLLARGFTLVTGGTDNHLILIDLTSRGVT
                     GKIAAKALDRAGISTNYNAVPYDPRKPFDPSGLRIGTPAITSRGMGASEMGKIAGWID
                     EVVKAPSDDALVARIARDVEELCKSFPAPGLAL"
BASE COUNT          514 a         1051 c         1103 g          493 t
ORIGIN      
        1 cgcgagcgtc tggtcgacga ggaacgcgct cgcttgtgcg ggggagacct gcaccgcttc
       61 ggcctcgacg tcacgaggcc gcacgatcgc ttcggcgtga caggcgtcga tgaggacgtg
      121 cacttcgtcg gcggggagct gtgcgaggat cccttcgtag aggaacgcct gatcgagccc
      181 gccgtcgctg agcgcgaggg cggggtgccc ctcgaagtcc acgctaccgt gcccgctgaa
      241 gtagaaaaag agcaccgtgc ggtgcccagc gtcgtgttgc tcgcgtagcc gctgagccaa
      301 acgcgtgact gcgctccgca cggcgtcacg cgtcggcgca cgcgcgcgcg cggcgagtcc
      361 gggatagagc tcctgggtgt cgcgatccat caccgtcagt agctccgtcg aggtggcgag
      421 ctcacccaag agctcggcga acgcggccgc gtcgtcgtcg gcgtaatgca gcggagcggg
      481 cgccgcctcc cccacggcgt ggaaaggcgc attgttgccg atgatcagcg cgtgcacgcg
      541 cgtggccgcc gccgcgggct cgagccgaag caggagccac aacgaagcgg cgagcacgcg
      601 ccagagcccg gcggcgcgcg ccgcacggcg acgatcaatc gaccacatcg atctcgaagc
      661 tctgcgcggg ctcggtcagc ttcgtcgctc gttcacggtc cacgggagcg tcgctgagcc
      721 agaccttgac gcgatagcga cccttcacgt gcggcggccc gagccgaacg ccttcgggag
      781 ctacgttggt cccggctgca acttcgacgc gcggcgccgc gccgtccgca tgcgggaagt
      841 accagatgcg cgacggttcc gaggcatcga gccgttcggc gtacgagacg acgtacacgg
      901 gcgccgtatt gccgagcacc gagaacagca gggtgtcgcc gagccggcag gtgtgcggag
      961 cgcgcccagg acagccgacg ccgacgacac cgcctgccgg cgtgctcccg cccttttcgg
     1021 cgtaatggct gggcgccgag ccaagcccca gccacagcgc caggcccgcg gccagcgcga
     1081 gcgcggagcc gaccagcggc catttcgctc gctttcgccg gggagtgatg gcttcgaaaa
     1141 tgcggcgctc gaccgcgtcg tactccgcgc cgctcaggcg gccgcgcgcg agcaagcgat
     1201 tgagctcgct gtcctcgccg gaaacgcggc cgagcttggt cattgctggc gcggctcgaa
     1261 agcgtcgagc cgaacgggac gctcgacgcg cagcagcccc gcgagcgcga gtgttttgcg
     1321 cagaccacgc cgtagctgct cttcgagcgt gcgcaacgag cggcgtgaga cgccgagcgt
     1381 tcggcaggct acctcctgcg tcagcccgag ctcgaaccgc tgctcgtaga cgccgcgcag
     1441 gtccggcgac aaccgctcga gatacgcttg gagcgcggcc aggacctccg gctcataatc
     1501 cgagtcgacg cggacctcgt cgagggtgag ccctgcttcg tgctcttcga aggggatttc
     1561 gtgcttgcgc ttgcgcaggg cgtcgatgaa ggagttccgt gcgatggcct tgatgtaggg
     1621 cgaaaagtcc ctggccgcgt cgtagctctg ccgagcggca taggagaaag cgcggatgaa
     1681 cgcgtcctgc aagagatcct gaatcgcgcc cgagtgcgag aatgcggtga cgccggagcg
     1741 gcggcccagg gcgcgaaagt agccttcgag cggccgcgcg taaaagcggt atacggtctc
     1801 gagcgcccgg cgctcgcccg cgcgaaacgc cgccaacagc tcgggatcgt tgcgcaataa
     1861 cggcattggc cacgaccgca cccacgcccg ccgcgatggc cccagacgac gataacggtc
     1921 catgaagagc gtaccgatcg cgctccgaac acgcaagccc cgtcggccac tcgcgcgttg
     1981 ccgccgcgtc aactcattcg tgactgcgct gcccgcggaa gccgtgactt caaatcattg
     2041 gagcagcgtg gccaggctca cagcgcgaga cccggcgccg ggaagctctt gcagagctcc
     2101 tcgacgtcgc gcgcgatacg ggcgacgagc gcgtcgtcgc tcggggcctt gacgacctcg
     2161 tcgatccagc cggcaatttt gcccatttca ctcgcgccca tgccgcgcga ggtgatggcc
     2221 ggcgtgccga tgcgcagccc cgacgggtcg aacggcttgc gcggatcgta gggcacggcg
     2281 ttgtagttcg tcgagatgcc ggcgcgatcg agcgccttgg ccgcgatctt gccggtgacg
     2341 ccgcgcgagg tgaggtcgat caagatcagg tggttgtcgg tgccgcccgt cacgagcgtg
     2401 aagccgcggg cgagcaggcc ttcggcgagc gcgcgcgcgt tcgccaccgt gttcgtcgca
     2461 taggtcttga actcgggcgt catcgcttcc ttcgcggcga cggcgatggc agcggtcgtg
     2521 tgattgtgcg ggccgccctg taggccaggg aacacggcgc gatcgatgtc cttggcgaac
     2581 gcctgcttgc acatgatgac ggcgccgcgc gggccgcgca gcgacttgtg cgtggtcgtc
     2641 gtcacgacgt ccgcgatgcc gagcggcgag ggatgcgcgc ctccggcgac gagacccgcg
     2701 atatgggcga tgtcggcgca gagcttggcg cccacttcgt cggcgatgcc gcgaaacgct
     2761 gagaaatcca aggttctcgg gtaagcgctc gtgccgcacc aaatgatctt cggcttgtgc
     2821 tcgcgcgcga gacgccgcac ctcgtcgaga tcgatccggt gatccttctg gctcaagccg
     2881 taaggcacgc ttttgaagta gcggcccgtg atgctcacgt tccagccgtg cgtgaggtgc
     2941 ccgccgaacg gcaagccgag acccatgatc ggatcgccgg gcgcgcagaa cgcgaggtac
     3001 gcggcgaggt tcgcggggct accgctgtag ggctgcacgt tcacgtgctc cgcaccgaaa
     3061 agttgcttga gccgcgacac ggcgagctct tccacctgat cgatgacgac ctggccctcg
     3121 tagtagcgct tgccgatgta gccctctgag tatttgttcg t
//
LOCUS       DATIML010000622         2819 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2434171, whole genome shotgun sequence.
ACCESSION   DATIML010000622 DATIML010000000
VERSION     DATIML010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2819
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2434171"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1356
                     /locus_tag="VLJ38_10660"
     CDS             <1..1356
                     /locus_tag="VLJ38_10660"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HSU40024.1"
                     /translation="TLMKIIAGVERPDTGSLELDDAAYAPAGPLAARARGVVTVHQEL
                     SLCPHLTVVDNIVLGSEPRRFGWIDQSAATERARRALALLGASTAALRLDARVAELSA
                     AEQQLVEIARALTHDACRLLILDEPTSSLGHDDAERLFATLGELATRGITILYVSHFL
                     DEVRRVADGYTVLRDGRHVESGRVQDTTNEALVTAMAGGAVQLEARRAGEAGEVLLTL
                     RNVSGLRLPREASLELRRGEVLGIAGLMGSGRTELLRAVFGLDRVKSGEIRVGAAAGP
                     ASPAARLAQGVGLLSEDRAHEGLALALSIENNLTLSRLRPLLRHGFLSPKSEHATAAR
                     WIERLGIRARGPEQRVGELSGGNQQKVAVARLLHHDVDVLLLDEPTRGIDVRSRGEIH
                     RLIGELCGAGKAVLIVSSHLDELLAVCDRIAVMHKGVLGAARAARGLSERALLEQAAG
                     A"
     gene            1353..2285
                     /locus_tag="VLJ38_10665"
     CDS             1353..2285
                     /locus_tag="VLJ38_10665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU40025.1"
                     /translation="MKQLLRRAWVGPLAALLAVYALFCALAPATFIGAVNLATMLRQT
                     AVVAVTSLGMTFVILLGGIDLSVGSAVALTGVVVARALQSGAGALSAVAIGVLAAALA
                     GALNGALTAHAKITPFIVTLGSMSVLRGIAKGLAGEQKIDAEPRGLETLMTGGANALM
                     PSGVWLALALARDGAVVLHYTVFGRHVIAIGSNVQTARLCGVPVERVVLAVYALAGAL
                     TGVAGVLEFSTLTVGDPTDSLGLELDAIAAVVIGGGSLAGGQGSIAGAMLGALLMTVI
                     KTGSTHVGLPNWVQEILTGVIIVVAVGIDRFRRR"
     gene            complement(2340..>2819)
                     /locus_tag="VLJ38_10670"
     CDS             complement(2340..>2819)
                     /locus_tag="VLJ38_10670"
                     /inference="COORDINATES: protein motif:HMM:NF014948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40026.1"
                     /translation="AVMFHDVRWGAEHDGRFLWVLLNSGSCGAYAFNHDPSTLKGAHT
                     YRQPSLYFPTPGGTFAGESLPGAVTWARAYIRDDVLWMDVGKGEVVKLPPATRDAWWE
                     GTTREWPFMAADLGVGRDTLMAHYQSNHVAVAYGDVFGEMVALSQELGFRVRILGSG"
BASE COUNT          394 a          978 c          995 g          452 t
ORIGIN      
        1 acgctgatga agatcatcgc gggcgtcgag cgacccgaca cggggtcact cgagctcgac
       61 gacgcggcgt acgctcccgc gggaccgctc gccgcgcgcg cgcgcggcgt cgtcaccgtc
      121 catcaagagc tctcgctttg cccgcacctc acggtcgtcg acaacatcgt cctcggcagc
      181 gaacctcgcc gtttcggctg gatcgaccag agcgccgcga ccgaacgcgc ccggcgcgcg
      241 ctcgcattgc tcggagcgag cacggcagcg cttcggctcg acgcgcgcgt cgccgagctc
      301 tccgcggccg agcagcagct ggtcgagatc gcgcgcgcgc tcactcacga cgcttgccgg
      361 ctgctcatcc tcgacgagcc gacgagcagt ctcgggcacg acgacgcgga acgtctgttc
      421 gcgaccctcg gtgagcttgc cacacgcggg atcacgattt tgtacgtgtc tcactttttg
      481 gacgaggtgc gccgcgtcgc ggacggttac acggttctgc gagacgggcg gcacgtcgag
      541 agcggcagag tgcaggacac gacgaacgag gcgctcgtca cggccatggc cggcggcgcc
      601 gtgcagctcg aagcacgccg tgcaggtgaa gccggtgagg tcttgttgac gctccggaac
      661 gtgagcggcc tgcggttgcc gcgcgaggcg agcctcgagc tccggcgtgg cgaggtgctc
      721 ggcattgcgg gcttgatggg ctcgggacgc acggagctct tgcgcgcggt cttcggcttg
      781 gatcgcgtga aaagcggcga aattcgcgtc ggagccgccg ccgggcccgc ctcgcccgcc
      841 gcgcggctcg cgcaaggcgt ggggctcttg agtgaggatc gcgcgcacga gggactcgcg
      901 ctcgcgctca gcatcgaaaa caacctgacg ctctcgcggc tacgtccact cctgcgccat
      961 ggcttcttgt caccgaagag cgagcacgcg accgcagcgc gctggatcga gcggctcggc
     1021 atccgcgcgc gcggtcccga acagcgcgtc ggggagctct cgggcggcaa tcagcagaag
     1081 gtcgccgtcg cgcgcctctt gcaccacgac gtcgacgtgc tcttgctcga cgagccgacg
     1141 cgcggcatcg acgtgcgcag tcgcggcgag atccatcgtc tgatcggcga gctgtgcggc
     1201 gcaggcaaag ccgtgctgat cgtgtcgagc cacctggacg agctgctcgc ggtgtgtgac
     1261 cgcatcgcgg tcatgcacaa aggcgtgctc ggcgccgctc gcgccgcccg tggactgtcc
     1321 gagcgagcgc tcctggaaca ggcggcgggc gcgtgaagca gctcttacgg cgggcttggg
     1381 tgggtcccct ggcggcactg ctcgcggttt acgcgctgtt ttgcgcgctc gcgcccgcca
     1441 cgttcatcgg cgccgtgaac ctcgcgacca tgctgcgcca gaccgcggtc gtcgccgtca
     1501 cgtcgctcgg catgacgttc gtgattttgc tgggcggtat cgatttgtcc gtcggctccg
     1561 cggtcgcgct cacgggcgtc gtcgtggcgc gcgcgctgca gtcgggcgcc ggcgcgctca
     1621 gcgccgtcgc gattggcgtt ctcgccgcgg ccctcgcggg cgcgctgaac ggcgcgctca
     1681 cggcgcacgc gaagatcacg cctttcatcg tgacgctcgg cagcatgagc gtgcttcgcg
     1741 gcatcgccaa gggactcgcc ggcgagcaga agatcgacgc cgagccgcgg ggtctcgaga
     1801 cgctcatgac gggcggcgcg aacgcactca tgccgagcgg cgtttggctc gcgctcgcgc
     1861 tcgcgcgcga cggcgccgtc gtgctgcact atacggtgtt cggccgccac gtcatcgcga
     1921 tcggctcgaa cgtgcagacg gcgcggctct gcggcgtgcc cgtggagcgc gtcgttctcg
     1981 cggtttatgc gctcgccggt gcgctcaccg gcgtcgcggg cgtgctcgaa ttttcgacgc
     2041 tgaccgtggg cgatccgacg gattccctcg gtctcgagct cgacgcgatc gccgccgtcg
     2101 tcatcggcgg cggctcgctc gcgggcgggc agggttcgat cgcgggcgcc atgctgggcg
     2161 cgctcttgat gaccgtgatc aagacgggct cgacgcacgt cggactcccg aattgggtcc
     2221 aggagatcct cacgggcgtc atcatcgtgg tcgccgtcgg gatcgatcgc ttccgccgcc
     2281 gctgacgcgt gcggctcgtc gccgcccagc ccaggacgag cccctcgcgc tcacggcgct
     2341 cacccgctgc cgagaatgcg cacgcggaaa ccgagttcct ggctgagcgc gaccatttcg
     2401 ccgaacacgt cgccgtaggc gaccgccacg tgattcgatt ggtagtgcgc catcagggtg
     2461 tcacgaccga cgccgaggtc cgcggccatg aacggccact cgcgcgtcgt gccttcccac
     2521 cacgcgtcgc gggtcgcagg cggcagcttc acgacctcac ccttgccgac gtccatccag
     2581 aggacgtcgt cgcgaatgta cgcgcgcgcc caagtcacgg cgcccggcaa gctctcgccc
     2641 gcgaaggtgc cgccgggggt ggggaagtag agcgacggct ggcgataggt gtgcgcgcct
     2701 ttgagcgtgc tgggatcgtg gttgaaggcg taggccccgc aagagcccga gttgaggagc
     2761 acccacagga accgaccgtc gtgctcggcg ccccagcgca cgtcgtggaa catcaccgc
//
LOCUS       DATIML010000623         1735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5038481, whole genome shotgun sequence.
ACCESSION   DATIML010000623 DATIML010000000
VERSION     DATIML010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5038481"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..683)
                     /locus_tag="VLJ38_10675"
     CDS             complement(6..683)
                     /locus_tag="VLJ38_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSU40027.1"
                     /translation="MVEPTPSPQRPLDPIALAFGSSGVVLGVLLVLLSASVAVWFIWF
                     LKVGQLSRLRSRNRGFEQEASTVHQGVDLVALARRHADSPGGRVVIELGRRQGQALSG
                     DFLLAVAKRAIASEQQRASILMPTLSSIASASPFIGLFGTVWGIMDAFLRIGVEKSAS
                     LPVVAPAIGEALIATAFGQVAAIPATIGFNYVDKRIGDLLDELTASAEVWVETLIADP
                     SDARGRG"
     gene            complement(712..1236)
                     /locus_tag="VLJ38_10680"
     CDS             complement(712..1236)
                     /locus_tag="VLJ38_10680"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU40028.1"
                     /translation="MRTLFIPLGSLILLAACSSEPKPVAQAPAPPPASAEPAPPPEKA
                     GDVPTRSNINISEDIKKACGLTDADAYFAFDSANVRPQDHAVLQKLAACFSTGPLKGR
                     MMRLVGHADPRGDEEYNMVLGGRRADNVKNAIVDAGLASSKIATTSRGEMDATGTDEA
                     GWEKDRRVDVMLGS"
     gene            complement(1444..>1735)
                     /locus_tag="VLJ38_10685"
     CDS             complement(1444..>1735)
                     /locus_tag="VLJ38_10685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40029.1"
                     /translation="LDHWDDEAAHRAFLEYCREHDQLVEAAVRYRGMRGDHQRGPLAE
                     KKLTAITALALARLESARSPDHRKPSRAVGYALVALFIAATIGLLAYLGPLR"
BASE COUNT          289 a          553 c          602 g          291 t
ORIGIN      
        1 catggttaac ctcgaccccg agcgtcactc gggtcggcga tcaacgtttc tacccacacc
       61 tctgccgagg ccgtgagctc gtcgagcaga tcgccgatgc gcttgtcgac gtagttgaag
      121 ccgatcgtgg ctggaatggc cgcaacctgg ccaaatgcgg tcgcgatcag cgcttcaccg
      181 atggccggcg cgacgacggg caaggatgcg ctcttctcga cgccgatgcg caagaaggcg
      241 tccatgatgc cccacaccgt gccgaacaag ccgatgaacg gcgacgcgga cgcgatgctc
      301 gagagcgtcg gcatcaagat gctcgcgcgc tgctgctccg aggcgatcgc gcgcttggcg
      361 acggcgagca ggaagtcgcc gctgagcgct tgaccttgcc ggcggccgag ctcgatcacg
      421 acgcgcccgc ccggcgagtc ggcgtggcgg cgggcgagcg ctaccaggtc gactccctga
      481 tgcacggtcg acgcctcttg ctcgaagccg cggttcctcg agcgcaggcg tgacagctgg
      541 ccgaccttca gaaaccaaat gaaccagacc gcgaccgagg cggacaggag cacgagcagc
      601 actccgagca ccacgcccga cgatccgaac gcgagcgcga tggggtcgag ggggcgttgg
      661 gggctcggag taggctcaac catcggtgtt ttctgctgtc aaagcgcggg ctcagctgcc
      721 gagcatcacg tcgacgcggc gatccttttc ccagcctgcc tcatcggtac ccgtcgcgtc
      781 catctcgccg cgcgaggtgg tagcgatttt gctcgaggcg agtcccgcat cgacgatggc
      841 gttcttcacg ttgtccgcgc gccgcccgcc gagcaccatg ttgtactcct cgtcgccccg
      901 cggatcggcg tgacccacga ggcgcatcat gcgtcccttg agcgggccgg tcgaaaagca
      961 cgccgccaac ttctggagca cggcgtgatc ctgcggccgc acgttggcgg agtcgaacgc
     1021 gaagtaggcg tcggcgtccg tgagcccgca agctttcttg atgtcttcag aaatgttgat
     1081 gttcgaacga gttggcacgt caccggcttt ttccggcggc ggcgcgggct cggccgacgc
     1141 agggggcggt gcgggcgctt gtgccacggg ctttggttcc gagctgcacg cggcgagcaa
     1201 aatcaacgag ccgagaggga taaacagagt tcgcatggtg catttcctcg caaggatttg
     1261 gggggacctt actcgctcgg gctctatagc ctggtgccgg gcccgttgcg aagcgcgatg
     1321 gggcctgatg gcgcagaatc gcggatttgt cggccgagca taaccgccga cggcggtcgt
     1381 gcattccagt ccactgccgt gggtgggtcg aaagcgcgcg gcgcggtctc ggcttggttc
     1441 ggctcagcgc agcgggccca gataggccaa caggccgatc gtcgcggcaa tgaacaaggc
     1501 aacgagggcg taacccacgg cgcggctcgg cttgcggtgg tccggagagc gcgcgctctc
     1561 gagccgcgcg agcgcgagcg cggtgatggc ggtgagcttc ttctcggcga gcgggccgcg
     1621 ctggtgatcg ccccgcatgc cgcgatagcg caccgcagct tcgacgagct gatcgtgctc
     1681 acggcaatat tcgaggaagg cgcgatgcgc ggcttcgtcg tcccagtggt cgagc
//
LOCUS       DATIML010000624         1555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_416049, whole genome shotgun sequence.
ACCESSION   DATIML010000624 DATIML010000000
VERSION     DATIML010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416049"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VLJ38_10690"
     CDS             <1..492
                     /locus_tag="VLJ38_10690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40030.1"
                     /translation="NFQSRVQMYLFKARQAAGEEFERALETTGLSVEKLRAFLKANPK
                     YAAGLHKSPHAGGSTPVDLVHEVAAVVNLTPAERRWKLARKHASAAFEFLTHAAKEAP
                     ASTKSAAVLFAQAAAELAEIAKEKAPGLAETAVNSARDRLGKLLPFAARATTPEPVAT
                     AAE"
     gene            735..>1555
                     /locus_tag="VLJ38_10695"
     CDS             735..>1555
                     /locus_tag="VLJ38_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40031.1"
                     /translation="MVAAALCSLQCGGERGAETTATAPLFTQTVHAGVQSDVFLEVPA
                     SSRCDLHSEGLAAIELYADVRGVVSFFVTLEAAGVSADFSVSCQGPGPAHRHTTQTVR
                     VSAVPDDEEPRAPTAWLAALAYPGRLVPALDEDPERVTAERLVELGLPAKPNRATAPE
                     EYALWLEQVSQPSVEIESNLTDADFEELPPRVPIVNTIPQEQHPIWAGFVTTGYAGIT
                     SPLFDTVYGAWAVPSVADGADTGTFYSSIWVGLGGYPTDAHGANEAFPNGRVKGAG"
BASE COUNT          270 a          525 c          522 g          238 t
ORIGIN      
        1 aacttccaga gccgcgtgca gatgtacttg ttcaaggcgc gccaagccgc aggcgaagaa
       61 ttcgagcgcg cgctcgagac gaccggcctc agcgtcgaga agctccgcgc gttcctgaag
      121 gcgaatccca agtacgcggc cggcctgcac aagtcgccgc acgccggcgg ttcgacgccc
      181 gtcgatctgg tgcacgaagt ggccgcggtc gtgaatctga cgcccgccga gcgccgctgg
      241 aaactcgcgc gaaagcacgc ctcggccgcg ttcgagtttt tgacgcacgc cgccaaggaa
      301 gcccccgcga gcaccaagtc agcggcggtg ctcttcgcgc aagccgcggc cgagctcgcc
      361 gaaatcgcca aagaaaaggc gccggggctc gccgaaacgg ccgtgaactc ggcgcgcgac
      421 cggctcggca agctgctgcc gttcgcggcg cgtgcgacca cgcccgagcc cgtcgcgacg
      481 gccgcggagt gagttcaagc accgtgtccg cttaaagctc gcgggcactg cccgaggcgc
      541 cggttccccc agaactggcg cttcggcgtc ttttgtcaac caggcgcgcc tctcgctccg
      601 taaagaaaag agtgcggtca atgccggctg ccacccgggc tcggcgctcg gcgcggccgg
      661 cgtgctggga atgacaaaca atgaagcatc caagtgggcg tgctccgtgg agcggtgggc
      721 ttgggcgaac cgcaatggta gcggcggcgc tctgttccct gcagtgtggc ggcgagcgcg
      781 gcgccgagac gacggccacg gcgccgctgt tcacccagac ggtgcacgcc ggcgtgcaga
      841 gcgacgtgtt cctcgaggtg cccgcgagct cacgctgcga cctccacagc gagggcctgg
      901 cagctatcga gctctacgcc gacgttcgcg gggtcgtcag tttcttcgtg acgctcgaag
      961 cagcgggcgt cagcgctgat ttttcggttt catgccaagg gccgggccct gctcaccggc
     1021 acacgacgca gacggttcga gtcagcgccg ttcccgacga cgaggagccg cgcgcgccga
     1081 cggcctggct cgccgcgctt gcctaccccg gccggctcgt tccggcgctg gacgaggacc
     1141 ctgagcgcgt aacggccgag cgtctcgtcg agctggggct cccggcgaag cccaatcggg
     1201 cgaccgcgcc ggaagagtac gcgctatggc tcgagcaggt ctcgcagccg agcgtcgaga
     1261 tagagtcgaa cctcacggac gccgatttcg aggagctccc tccgcgagtt cccatcgtaa
     1321 ataccatccc tcaagaacag caccccatct gggcagggtt cgtgaccact ggatatgcgg
     1381 ggatcacgag cccgttgttc gacacggtct atggcgcgtg ggcggttcca agcgtcgcgg
     1441 acggagccga caccggcacc ttttactcgt ccatttgggt cggacttggc ggctatccca
     1501 ctgacgcaca tggagccaac gaagcgttcc caaatggacg agtaaaaggt gccgg
//
LOCUS       DATIML010000625         3080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4167713, whole genome shotgun sequence.
ACCESSION   DATIML010000625 DATIML010000000
VERSION     DATIML010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4167713"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..940
                     /locus_tag="VLJ38_10700"
     CDS             <1..940
                     /locus_tag="VLJ38_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase"
                     /protein_id="HSU40032.1"
                     /translation="NSDGSNNLKDDAYDTFADYLTEVVKHYQDSFGITFRTLEPLNEP
                     NADWWKANGGQEGCHFSPSNQQTLVKAVGAKLTAKGLTATTVAASDENSIDDAYTNLR
                     TFDATALATLSQMNVHTYSGSRRADLRTLATSKSKRLWQSESGPLNQTLADDTEAALF
                     MAGRIISDLRDLQPEAWVDWQVGDPSTNWASISLSDAKQTFTPLKRFYMHAGFSRYIR
                     PGATFVDIDNSDMVAAVSADGHSLAIVARNGDTSASKAFTFDLTTLPGVGSEVEIHRT
                     SRSENLASVAAQPIQGFSFVVTVPAFSVTTFVVPLP"
     gene            973..2880
                     /locus_tag="VLJ38_10705"
     CDS             973..2880
                     /locus_tag="VLJ38_10705"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU40033.1"
                     /translation="MPEDPASRIESLEAEKRRLQVMLASSADFIARITVDGRFLYVNH
                     VAQGHEIASVIGTSVYDYIPAAFHERAQRAIKTAHETRSVQEYRTIGPVSTERNGHYL
                     TRVSPVIESGEVTSLVMTATNITVLEEQRLLLQLALEAVGLGTFSFDPATGEGSWDDM
                     AASVFGLAPGTPMPGMTRFFAEYLHPDDHELASKAFEQTLADARFGPIEYRVRLASGS
                     TRWVSAAGTTMRDPKGAIIAIVGTLKDVTERRALEARLRDAEKLESIGRLAGGVAHDF
                     NNMLTAILGNVAFAAGVESLEEMRPLLDEVRVAAERSAALTAQLLAFARRQLVEPKII
                     APDELIQRLEPLLRRLLDERNKLELKLGASSHVRIGESQLEQVVMNLVTNARDSLAGM
                     GHITVETRDVTLSAATSTEAGLAPGDYLLLAVSDTGRGIPADVRPHLFEPFFTTREGG
                     TGLGLATCYGIVTQNGGSISVESELAEGSTFRVFLPRVAAGTSAGASPTSLRRPTTRI
                     NVLVVEDEDSVRRVIEHALRGEDFVVSVASGAEEARRLAAAHAPFDVLVTDIVMPEVD
                     GHELARGLRERWPELAVLFISGYTQEMPLNEHGSDPTVAFLQKPFRPSDLSNAVHQLL
                     GASVSARRQAR"
     gene            complement(2887..>3080)
                     /locus_tag="VLJ38_10710"
     CDS             complement(2887..>3080)
                     /locus_tag="VLJ38_10710"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSU40034.1"
                     /translation="GSHRGQTVCAVAHGHLLRALAARLLGLPLREGRIFAIGTCAIGD
                     FFERDGRFQLAAWNRRPVG"
BASE COUNT          574 a         1042 c          994 g          470 t
ORIGIN      
        1 caatagcgac ggttccaaca atctgaagga cgatgcgtac gatacgttcg ccgactacct
       61 gaccgaggtc gtcaagcact accaggacag cttcggcatc acgttccgta ccctcgagcc
      121 gctcaacgag ccgaacgccg attggtggaa ggcgaacggc ggacaggaag gctgccactt
      181 ctcgccgtcc aaccagcaga cgctcgtcaa ggcggtaggc gcaaaactta cggccaaggg
      241 gctcaccgca acgaccgtcg ccgcctcgga cgaaaacagc atcgacgacg cctacaccaa
      301 cctgcgcacc ttcgacgcca cggcgctggc aacgctgagc cagatgaacg tgcacaccta
      361 ctccggcagc cggcgagcag atttgcgaac gctcgcgacg agcaagagca agcgtctctg
      421 gcaatcggag tccgggcccc tcaatcaaac gctcgccgac gataccgagg cggcgctgtt
      481 catggccgga agaatcatca gcgatctccg ggatctgcag ccagaggcct gggtcgactg
      541 gcaggtgggc gatcccagca cgaattgggc tagcatcagc ctgagcgacg cgaaacagac
      601 gttcactccg ctcaagcgct tttacatgca cgcgggcttc agccgctaca tccgccccgg
      661 cgccactttc gtcgatatcg acaatagcga catggtggcg gccgtgagcg cggacggtca
      721 ttcgctcgcg atcgtcgcgc gcaacggcga cacgtccgcg agtaaggcgt ttactttcga
      781 cctcacgacg ttgcccggcg tgggcagcga ggtcgagatc caccgcacct cgcgtagcga
      841 aaatctcgcg tcggtcgcgg cccagcccat ccagggcttt agcttcgtcg ttaccgtgcc
      901 ggcgttctcg gtcacgacct tcgtcgtgcc cctgccctga caggccagcg tcacgtaggt
      961 tactctcggt atatgccgga ggaccccgcc agccggatcg agtcgctcga ggcggaaaag
     1021 cgacggctcc aggtgatgct ggcgtcttcc gccgacttca tcgcgcgcat caccgtcgac
     1081 ggcaggttct tgtacgtgaa ccacgtggcg cagggccacg agatcgcgtc cgtgatcggc
     1141 acgagcgtct acgactacat tccggcggcg tttcacgagc gcgcccagcg agccataaaa
     1201 accgcgcacg agacgcgcag cgttcaagag taccggacga ttggtcccgt gagcaccgag
     1261 cgcaacggcc actacctcac gcgcgtgagt cccgtgatcg aaagcggcga ggtcacctcg
     1321 ctcgtgatga cggcgacgaa catcaccgtg ctcgaggagc agcggttgct cctgcagctc
     1381 gctctggagg cggtgggcct gggcacgttc agcttcgatc ccgcgacggg cgaaggctct
     1441 tgggacgata tggccgccag cgtgttcggt ctcgcgccgg gcacgcccat gccgggcatg
     1501 acgcggtttt tcgcggagta cttgcacccc gacgaccacg agctcgcgtc gaaggcgttc
     1561 gagcaaacgc tcgcggacgc gcgcttcggt cccatcgagt accgagtgcg actcgcgagc
     1621 gggagcacgc gttgggtgag cgcggcgggc acgaccatgc gcgacccgaa gggcgccatc
     1681 atcgcgatcg tcggcacgct gaaggacgtg accgagcgcc gtgccctcga agcgcggctg
     1741 cgcgacgccg aaaaactcga gagcatcgga cggctcgccg gcggcgtcgc acacgacttc
     1801 aacaacatgc tgacggcgat tctcggcaat gtcgccttcg cggcgggcgt ggagtcgctg
     1861 gaggaaatgc gcccgttgct cgacgaggtg cgcgtcgccg ccgaacgcag cgccgcgctg
     1921 acggctcagc tgctcgcttt cgcgcggcgc cagctcgtcg agccgaaaat catcgcaccg
     1981 gacgagctca tccagcgact cgagccgctg ctccgccgct tgctcgacga gcgcaacaag
     2041 ctcgagctga agctcggcgc gtcctcgcac gtgcgcatcg gtgaaagtca gctcgaacaa
     2101 gtggtgatga acctcgtgac caacgcgcgg gactcactcg ccgggatggg gcacatcacg
     2161 gtggagacgc gcgacgtgac gctctcggcg gccacgagca cggaagccgg gctcgcgccg
     2221 ggcgactact tgctgctggc cgtgagcgac accggacgcg ggatcccagc ggacgtgcgt
     2281 cctcacctgt tcgagccgtt tttcacgaca cgtgagggcg gcacggggct cggcctcgcc
     2341 acctgctacg gcatcgtcac gcagaacggc ggctcgatca gcgtcgaaag cgagctcgct
     2401 gaaggctcca cgttccgagt cttcttgcca cgggtcgcag cgggcacctc ggcgggagcg
     2461 agccccacct cactccgccg cccgacgacg agaatcaacg tgctcgtcgt cgaggacgaa
     2521 gacagcgtgc gccgcgtcat cgagcatgcc ctgcgcggcg aagatttcgt ggtctcggtc
     2581 gcgagcggcg ccgaggaggc gcggcggctc gcggccgcgc atgcgccttt cgacgtactc
     2641 gtcaccgaca tcgtcatgcc cgaagtcgac ggccacgagc tcgcgcgcgg cttacgcgag
     2701 cggtggcccg agctcgccgt cctcttcatc tccggctaca cacaggaaat gccgctcaac
     2761 gaacacggca gtgatccgac cgtcgctttc ttgcagaagc cgttccgccc gagcgacctg
     2821 tcgaacgccg tgcaccaact gctcggcgcc tcggtgagcg ccaggcggca agcgcggtga
     2881 acggagtcag cccacaggcc tgcggttcca ggccgcaagt tgaaagcggc cgtcgcgttc
     2941 gaaaaagtcg ccgatagcgc aggtgccgat cgcaaagatg cgcccttcgc gcaagggcag
     3001 gccgagcaga cgcgcggcta gagcacgcag gaggtggccg tgagcgaccg cgcagaccgt
     3061 ctgtccgcga tggctcccgc
//
LOCUS       DATIML010000626         4053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3592479, whole genome shotgun sequence.
ACCESSION   DATIML010000626 DATIML010000000
VERSION     DATIML010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4053
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3592479"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VLJ38_10715"
     CDS             complement(<1..797)
                     /locus_tag="VLJ38_10715"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU40035.1"
                     /translation="MSLSRTRVLPEVLWITLASATVAACAGERPSLTSLRSSADERIA
                     GRRLREGDSAEKLLSEPLTPESAARVALLNNHDVQAAYEKLGVAHGDLVHALRFPNPR
                     ADAAVRFFHSGSPEIEILATIGLSDLAFLPLKSEAASAALEAERLEALGVIFDLAFDV
                     RLAFIAYQAAEQTLELAHTVLGATQASAEAAARLHEAGNTTDLDLANQRAFNEEARVA
                     ARRAEAARVEARAHLNELMGLAANAEWSPAVARLPEPPAEELALAGLA"
     gene            complement(794..2143)
                     /locus_tag="VLJ38_10720"
     CDS             complement(794..2143)
                     /locus_tag="VLJ38_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper oxidase"
                     /protein_id="HSU40036.1"
                     /translation="MDEKIDRSRRDAVLGGAVLAGTAALLVDGQARAAAASARSWDRS
                     YSGGQLGRTPLLPGEPGRDYVPSVTPGGSTLPWRVVDGAKIYHLVAGEVEHEFAPGLK
                     AKCWGYNGSVHGPTLEAVEGDHVRVYVTNKLPEPTTVHWHGVYLPNGMDGVGGLTQRV
                     IQPGETFKYEWTFRQSGTLMYHPHHDEMTQMALGMMGMIVVHPRRPPAGYQVDRDFVI
                     LLSEWRIKPGTQRPDPIEMTDFNVLTMNGKVFPATTPLVSRLGERVRVRFGNLSAMDH
                     HPIHLHGHYFKIVATDGGSIPTSAQWPESTVLVPTGSTRDIEFVSDAAGDWPLHCHMT
                     HHVMNQMGHGVPNMIGVKSGSLDKNVGSLVPGYMTMGQEGMGSMGEMSMAVPPNSIPM
                     VGGHGPYGYITMGGMFTLLKVREHLDGYDDPGFYKAPPGTVAELAKPADAKRDGIPL"
     gene            2353..2757
                     /locus_tag="VLJ38_10725"
     CDS             2353..2757
                     /locus_tag="VLJ38_10725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40037.1"
                     /translation="MPEVSLDTKNQCTLDDPTDGADLPSAVPSARTPNEVPTAAPVPL
                     CLAQEPGSGGATSDCTDELVRQFGGGEGAGPFGPTPLADKDSCSAETLSFVGACGKVL
                     YELVEERKIDPFNVASCAGSISSLTHCEFKGD"
     gene            complement(2832..3587)
                     /locus_tag="VLJ38_10730"
     CDS             complement(2832..3587)
                     /locus_tag="VLJ38_10730"
                     /inference="COORDINATES: protein motif:HMM:NF042851.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA family kinase"
                     /protein_id="HSU40038.1"
                     /translation="MSLPRFTTGHVLGRLVRGASSSPVVVETPGGRFVLKLRGAGGGV
                     PALIAELVVAELAERLGLPVPERALVALDADFRSDDRNDELHDLLTRSVGLNVGFRFL
                     EGSRLPRPEELARLDDDFVARVLWLDGLTLNPDRTSGNPNILFWKQRPWLIDHGAALS
                     FHYDWARVTEASPRELTTYAGHVFAERADRLSLVDATLARRLDPHALAACLKVVPDEF
                     FETVAHEAPARARAAYEAFLWKRLKPPRPFAAG"
     gene            complement(3590..>4053)
                     /locus_tag="VLJ38_10735"
     CDS             complement(3590..>4053)
                     /locus_tag="VLJ38_10735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40039.1"
                     /translation="LLHRWGVVFRRVIDREGALPPWRDLLRCYRRLEARGEIRGGRFV
                     AGFSGEQYALPDAVAALRAVRRKPHDHALIAVSAADPLNVVGILTPGRRVPALAGNRV
                     LFQDGLAVAVREGATTRLLAGDAEKPAHELEAALIRRRLPPTVRAYLGNAG"
BASE COUNT          643 a         1330 c         1445 g          635 t
ORIGIN      
        1 gcgagacccg cgagcgcgag ctcttcggcg ggcggctcgg gcaggcgcgc gacggcgggc
       61 gaccactcgg cgttggccgc gagccccatg agctcgttca ggtgagcacg ggcttcgacc
      121 cgtgccgctt cggcacgccg cgcggcgacg cgcgcttcct cgttgaaggc gcgctggttg
      181 gcgagatcga ggtcggtcgt gttaccagct tcgtgcaagc gcgcggcggc ctcggccgag
      241 gcctgcgtcg cgccgaggac ggtgtgcgcg agctcgagcg tctgctcggc ggcctgatac
      301 gcgatgaagg cgaggcgcac gtcgaaggcg agatcgaaga tgacgcccag cgcctcgagc
      361 cgctcggctt cgagcgcggc gctcgccgct tcgctcttga gcggcaagaa cgcaagatcc
      421 gagagcccga tcgtcgccag gatttcgatt tccggggaac ccgaatgaaa aaagcgcacg
      481 gcagcgtccg cgcgtgggtt cgggaagcgc aaggcatgca ccagatcccc gtgagcgacg
      541 ccgagctttt cgtaggccgc ctgcacgtcg tgattattga ggagcgcgac gcgcgcggcg
      601 gactccgggg tgagcggctc ggacaagagc ttttcggcgc tgtcaccctc gcgcaggcgc
      661 cgcccggcaa tgcgttcgtc ggcgctgctc cgaagtgacg tgaggctcgg cctttcgccc
      721 gcgcacgcgg cgaccgtggc gctagcgagc gtgatccaaa gcacttccgg caaaactcgc
      781 gttcggctca aactcacagg gggatcccgt cacgcttggc gtctgcgggc ttcgcgagct
      841 ccgccacggt tccgggaggc gctttgtaaa agccgggatc gtcgtagccg tcgaggtgct
      901 ctcgcacctt gagcagcgtg aacatgccgc ccatcgtgat gtacccgtac ggcccatgac
      961 cgcccaccat cgggatgctg ttgggcggta cggccatcga catctcgccc atgctgccca
     1021 tgccctcttg gcccatcgtc atgtagccgg ggacgagcga gccgacgttc ttgtcgaggc
     1081 tgccggattt gacgccgatc atgttgggca cgccgtggcc catctgattc atgacgtggt
     1141 gggtcatgtg gcaatgcagc ggccagtcgc cggccgcgtc gctgacgaac tcgatatcgc
     1201 gcgtcgagcc ggtcggcacg agcacggtgc tttcgggcca ctgtgccgag gtcgggatcg
     1261 agcccccgtc cgtggcgacg attttgaaat agtggccgtg caggtggatc gggtgatgat
     1321 ccatcgcgct caggttgccg aagcggacgc gcacgcgctc gccgagtctc gagacgagcg
     1381 gggtcgtggc agggaagacc ttgccgttca tcgtgagcac gttgaaatcg gtcatttcaa
     1441 tgggatcggg gcgctgcgtg ccgggtttga tgcgccactc gctcagaagg atcacgaagt
     1501 cgcgatcgac ctgatagccg gccggcggac gccgtggatg cacgacgatc attcccatca
     1561 tcccgagcgc catctgggtc atctcgtcgt ggtgtgggtg atacatgagc gtgcccgatt
     1621 gccggaacgt ccactcgtat ttgaaggtct caccgggctg gatcacgcgc tgagtgaggc
     1681 cgccgacgcc gtccatgccg ttcggtaagt agacgccgtg ccagtgcacc gtggtcggct
     1741 cgggaagttt gttggtgacg tagacgcgga cgtggtcgcc ctcgacggcc tcgagcgtcg
     1801 ggccgtgcac ggacccgttg tagccccagc acttcgcttt gagccccggt gcgaactcgt
     1861 gttccacctc gccggccacg agatgataaa tctttgcgcc gtcgaccacg cgccagggca
     1921 gcgtcgagcc gcccggggtc acgctgggca cgtagtctcg ccccggttcg ccgggcaaaa
     1981 gcggcgtgcg cccgagctgt ccgccgctgt aggaccgatc ccagctccga gctgacgccg
     2041 ccgccgcgcg ggcctgcccg tccacgagca acgccgccgt cccggcgagc accgcaccgc
     2101 ccagcaccgc gtcacgccgc gatcgatcga tcttctcgtc catttccgca ctcctcgctc
     2161 ttccggcgag cgcaggctcg cgcgacacca acacccgagg tgtcacgaat attacccctc
     2221 gctcgcgggc gccatgtttc agcagcgaca cgggcgcgtg ccgccgcgca cgagggtcac
     2281 gcaaccgagt cgggaacccg accgatgcat gggctgcggg gcactttcat ccccccgcga
     2341 ggagtttcag agatgcccga agtgagtctc gacaccaaaa accagtgcac gctcgatgac
     2401 cccacggacg gggcggattt gccaagtgcc gtcccaagcg cccgaacgcc caatgaagta
     2461 cctacggcgg ctccggtgcc gctttgcctg gctcaagagc cgggaagcgg cggcgccacg
     2521 agcgactgca cggacgagct ggtgcgccag ttcggcggcg gtgagggcgc cggaccgttc
     2581 gggcccacgc cgctcgccga caaggactcg tgctcggccg aaacgctctc gttcgtcggc
     2641 gcctgcggca aggttctcta cgaattggtg gaggagcgga agatcgatcc gttcaacgtg
     2701 gcaagctgcg ccggctcgat ctcgtcgctc acccactgcg agttcaaggg cgattgagtc
     2761 gccggagcga gagcgctgga gtggagcctc tccggcgctc ccgcggggcg tctcgcaagt
     2821 ggccatgctc gtcagccggc cgcgaacgga cgtggcggtt tgaggcgttt ccagagaaac
     2881 gcttcgtacg cggcgcgagc tcgcgccggc gcttcgtgcg cgacggtttc gaagaattcg
     2941 tcgggcacga ccttgaggca cgccgcgagc gcgtgcgggt cgaggcggcg cgcgagcgtg
     3001 gcgtcgacga gcgacaagcg atcggcgcgt tcggcgaaga cgtgcccggc gtaggtcgtg
     3061 agctcgcgtg gcgacgcttc ggtcacgcgg gcccagtcat agtggaagga gagcgcggcg
     3121 ccgtgatcga tgagccacgg gcgctgcttc caaaagagga tgttggggtt tccgctcgtg
     3181 cgatcggggt tgagcgtgag gccgtccagc cagagcacgc gcgcgacgaa gtcgtcgtcg
     3241 agacgagcga gctcttcggg gcgcggcaac cgcgagccct cgaggaagcg aaagccgacg
     3301 ttcaagccga cgctgcgcgt caggaggtcg tggagttcgt cgttgcgatc gtcgcttcga
     3361 aagtcggcgt cgagcgccac gagggcgcgc tccggcacgg gcaatccgag ccgttccgcg
     3421 agctcagcca cgacgagctc ggcgatgagc gccggcacgc cgccgcccgc gccgcgcagc
     3481 ttcaagacga agcggccccc cggcgtttcg accacgaccg gcgaggagct cgccccgcgc
     3541 acgagccggc ccaaaacgtg acccgtcgtg aagcgaggca gcgacacgct caacctgcgt
     3601 tgccgaggta cgcgcgcacg gtcggcggca agcggcgccg gatcagcgcg gcttcgagct
     3661 cgtgcgcggg cttttcggcg tcgcctgcga ggagacgcgt ggtcgcgccc tcgcgcacgg
     3721 cgacggcgag gccgtcttgg aagaggacgc ggttaccggc gagcgcgggg acacggcggc
     3781 ccggcgtgag gatgccgacc acgttgagcg gatcggcggc gctcacggcg atgagcgcgt
     3841 ggtcgtgggg tttgcggcgc acggcgcgga gggcggcgac ggcgtcgggc agggcgtatt
     3901 gttcgccgct gaaaccggcg acgaagcgac ccccgcggat ttcgccgcgc gcttcgaggc
     3961 ggcgatagca acgcagtagg tcgcgccacg ggggcagcgc gccctcgcga tcgatgacgc
     4021 gccggaacac gacgccccag cggtggagca gcg
//
LOCUS       DATIML010000627         4406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_416426, whole genome shotgun sequence.
ACCESSION   DATIML010000627 DATIML010000000
VERSION     DATIML010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4406
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416426"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VLJ38_10740"
     CDS             <1..528
                     /locus_tag="VLJ38_10740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSU40040.1"
                     /translation="RAREVKDRVDEVLANGVYHTLDWEELNHGLFTALRIQQILMSLV
                     LALIIVVAAFTVIATLIMVVLDKKREIAVLKAMGARNTALLRTFLYQGAIIGLVGAVL
                     GLGLGYVICKLLNVYGLPLDPKVYFISKLPVLMRASDFVWVGVFAVLVCLVATVWPAQ
                     YAARLRPAEAFRENR"
     gene            complement(702..1412)
                     /locus_tag="VLJ38_10745"
     CDS             complement(702..1412)
                     /locus_tag="VLJ38_10745"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU40041.1"
                     /translation="MRGIVCEFKSYSALESVLARGHEERDFEMPHCDAVRDGEWLVVT
                     VIVGDESTSVAGRVDEHGEGFRLAFEQRDWERLHGFVEEGGPPSLGPAERANVPHPVC
                     AAPGTRVLVVDDDSAQQTIVGAMLQASGICAVSVGSAEEALQTLKTVPVDLVVLDWSL
                     PGMSGLELCHKLRQEPRFSVLPVLFLTAHSASDDLVTAFEAGADDFVSKPFRALELKA
                     RVLGLLRRTQAPALAVGH"
     gene            complement(1517..2188)
                     /locus_tag="VLJ38_10750"
     CDS             complement(1517..2188)
                     /locus_tag="VLJ38_10750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40042.1"
                     /translation="MSVRLGVDTARDLLARSRLKSYAAAAAATVVASGLHERASDASG
                     ADRALLGLTLPLVVPMACYAVFDCAFGAAKSSLRTEPLARYGADRFRVTLGLDAVAVA
                     TCAVLAAALALLAVLAASAMPMHALGDIYASVWGGALVGAAYGCLLALGSTWGRAGRL
                     WLLLGDWVFGSGTGAAALPWVRGHARTLLGGEPVLRTSPALATVSRLVLASLCVLAAA
                     RRGPR"
     gene            complement(2185..2835)
                     /locus_tag="VLJ38_10755"
     CDS             complement(2185..2835)
                     /locus_tag="VLJ38_10755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40043.1"
                     /translation="MTQIELRGVAHGALRAAAGSFACTCTVITGDDARALATVVAVMS
                     GAVRPERGVVLLDGVPLDTTPGARRRVASLLGSENLPFARDVDAAVARALRARGDVQR
                     SHDVLARFGLDVWSRRAPNDLDRDELRSVALALALSHEQAEVLVLYEPLATSVSAAMS
                     LEMAARRTLERGAVVVIATASRAGALRWGGPHCAVSDGVLAPVAHDSVARSDGAAP"
     gene            complement(2832..3257)
                     /locus_tag="VLJ38_10760"
     CDS             complement(2832..3257)
                     /locus_tag="VLJ38_10760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40044.1"
                     /translation="MFADQNSRRWLVLRALAEERLAEGFLGRAARVYSWGIAVSYGAL
                     MLLAPGSALRLLERALVTGLGVVGTLMASTLLRDVLADPRRDALSSLARENGFARREL
                     LLARGAAALVRFVKVLGVPGAVLACVALAMHLADAGAAR"
     gene            complement(3247..4161)
                     /locus_tag="VLJ38_10765"
     CDS             complement(3247..4161)
                     /locus_tag="VLJ38_10765"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40045.1"
                     /translation="MRRWVVLLLTGCSAGAPLPPQAAALNAAGVEAFKHGDLETADAR
                     LSVALEYSPHFVEALVNLGLVELERGNFERARLLCERARRLNPDVAQPHHALGVLAER
                     ERRPDDASRHYYDALRVDPGFAPSRQNLARLLFRAGLTEEALVQYERLVQVSPNDPSA
                     EAGLVETLVRLGRRDEAEARLTPALERFPDAPELLILHARSLLRAGQIEQAVAALAPL
                     ASRHDELGAAALAWLATAELARGNADGAVTQARRALTLEPDSTVATYALALGLRELGA
                     AEAEAWLARARRTSPSDPLLQSPPARVR"
BASE COUNT          727 a         1465 c         1567 g          647 t
ORIGIN      
        1 cgtgcgcgcg aggtcaaaga tcgcgtcgac gaggtgctcg cgaacggcgt ttatcacacg
       61 ctcgattggg aagagctgaa tcacggactc ttcacggccc tgcgcattca gcagatcctg
      121 atgagcctcg tcctggcgct catcatcgtg gtcgcggcgt tcacggtgat cgcgacgctc
      181 atcatggtcg tcctcgacaa gaagcgcgag atcgccgtgc tcaaagccat gggcgcgcgc
      241 aacacggcgc tgctccgcac gttcttgtat cagggcgcca tcatcggtct cgttggcgcg
      301 gtgctcggtc tcgggctcgg ctacgtgatt tgcaagctcc tgaacgtcta cggcttgccg
      361 ctcgatccca aggtttactt catctcgaag cttccggtct tgatgcgagc gagcgacttc
      421 gtgtgggtcg gcgtgtttgc cgtgctcgtc tgtctcgtcg ccacggtctg gcccgcgcaa
      481 tacgcggcgc gcctccggcc cgccgaagcc tttcgcgaaa accgctgagt cgcgctgatt
      541 tgggcttcgc gagtgcagcg ctgctttgag gggcctgcga gccgcgtcgt gcgaccaatt
      601 cgttcagaag gaggttggcg ttggcttcgc cagagcactc gcgtggctct tggtctcgct
      661 cgctgatcgt gatctggccc gccaagactc tgagcgtcgt gtcagtgacc gacggcgagc
      721 gcgggcgctt gcgtgcgcct gagcaagccg agcacacgag ctttgagctc gagcgcacgg
      781 aagggcttgc tcacgaagtc gtcggcgccg gcctcgaacg cggtgacgag gtcgtcgctc
      841 gcagaatggg ccgtgagaaa gagcacgggc aagacgctga agcgcggttc ttggcggagc
      901 ttgtgacaaa gctcgaggcc gctcatgccg ggcagcgacc agtcgaggac gacgaggtcc
      961 acgggaaccg ttttgagcgt ctggagcgct tcctccgcgc tgccgacgga aacggcgcaa
     1021 atcccggaag cttggagcat ggcgccgacg atggtttgtt gagcgctatc gtcgtcgacg
     1081 acgagcacgc gcgtgccggg agcggcgcac accgggtgcg ggacgttggc gcgctcggcg
     1141 ggaccgagcg agggcggccc gccttcctcg acgaagccgt gcaagcgctc ccaatcgcgc
     1201 tgttcgaacg cgaggcgaaa gccttcgccg tgctcgtcga cgcggccggc gacgctcgtg
     1261 gattcatcgc cgacgatcac ggtaacgacg agccattcgc cgtcgcgcac tgcgtcgcaa
     1321 tggggcatct cgaagtcgcg ctcctcgtga cctcgggcga ggacgctttc gagcgcggag
     1381 taactcttga attcgcagac gataccgcgc actggtcgct actttgccac tttgatgtcg
     1441 ttcgtccagc tgtcgcagcg tgtgacgcca tgcgacgaag cgagcagcaa atcggtgggt
     1501 gggtgcagcg ccggactcat cttggcccgc gccttgcagc ggccagcacg cacaacgacg
     1561 cgagcaccag tcgcgaaacc gtagccaaag cgggggacgt acggagcacg ggctcaccgc
     1621 ccagcagagt tcgcgcgtgg ccgcgcaccc acggcagcgc cgccgcgccc gtaccggatc
     1681 cgaacaccca atcgccgagg agcaaccaaa gtcggcccgc tcggccccac gtggacccga
     1741 gcgccaacag gcagccatac gcggcgccga cgagcgctcc cccccacacg ctggcgtaga
     1801 tgtcgccgag cgcgtgcatt ggcatggcgc tcgctgccag cacggcgagt agcgcgaggg
     1861 cggccgcgag tacggcgcaa gtagcgacgg cgacggcgtc gaggccgagc gtcacgcgaa
     1921 agcgatcagc gccgtagcgc gcgagcggct cggtacggag cgagctcttg gccgcgccga
     1981 aagcgcagtc gaacactgcg tagcaagcca tgggtacgac gagcggcagc gtcaagccga
     2041 gcagcgcccg atcggcaccg ctcgcgtcgc tcgcgcgctc gtgcaaaccg gaggcgacga
     2101 cggtcgcggc ggcggcggcg gcatagcttt tgaggcgcga acgcgcgagc aagtcgcgag
     2161 ccgtgtcgac gccgagtcgc acgctcacgg cgctgctccg tcgctccgag ccacgctgtc
     2221 atgcgcgacg ggggccagca cgccgtcgct gacggcgcag tgcggtccgc cccagcgcag
     2281 cgcacctgcg cggctcgccg tcgcaatcac gacgacggcg ccccgctcga gcgtccgccg
     2341 agcggccatt tcgaggctca tcgcagccga aacgctcgtc gcgagcggct cgtacaaaac
     2401 gagcacttcg gcctgctcgt ggctgagcgc cagcgcgagc gccaccgagc gaagctcgtc
     2461 gcggtcgagg tcgttcggcg cgcggcggct ccagacgtcg aggccgaacc tcgcgagcac
     2521 gtcgtgcgat cgctgcacgt cgccgcgcgc ccgtagcgca cgcgccacgg ccgcgtcgac
     2581 gtcgcgcgcg aacggcaggt tctcgctgcc gagcagcgac gcgacacgac gccgcgcgcc
     2641 tggtgtcgtg tcgagcggca cgccatccaa gagcaccacg ccgcgctcgg gtcttacggc
     2701 gccgctcatg acggcgacga cggtcgcgag tgcgcgcgcg tcatcgcctg tgatgaccgt
     2761 gcaggtacac gcgaagctgc cggccgcggc acgtagggca ccgtgagcga ccccgcggag
     2821 ctcgatctgc gtcaccgtgc cgcccctgcg tcagcgaggt gcattgcgag cgcgacgcac
     2881 gcgagcacgg cgcccggcac gccgaggact ttgacgaagc gcacgagcgc ggccgcgccg
     2941 cgagccaaga ggagctcacg ccgcgcgaag ccattttcac gcgccaagct cgagagggcg
     3001 tcgcgtcgtg gatcggcaag cacgtcgcgc aagagcgtgc ttgccatcag tgtgccgacg
     3061 acgccgagac cggtgacgag tgctcgttcg aggagcctga gcgcgctgcc gggcgcgagc
     3121 agcatgagcg cgccgtacga aactgcgatg ccccagctgt acacgcgcgc cgcgcggccg
     3181 agaaatccct ccgccaggcg ctcctcggcg agcgctcgga gcacgagcca acggcgtgag
     3241 ttttggtcag cgaacacgag caggcggcga ttgtaacagc ggatcggacg gcgacgtgcg
     3301 gcgagcccgc gcgagccagg cttctgcttc ggcggcgccg agctcgcgca ggccgagcgc
     3361 cagggcgtac gtcgcgacgg tgctgtccgg ctcgagcgtg agcgcgcggc gggcttgcgt
     3421 gaccgcgccg tcggcgttcc cgcgcgcgag ctcggccgtg gcgagccacg ccagcgcggc
     3481 ggcgccgagc tcgtcgtggc ggctggcgag cggcgctagc gctgccacgg cttgctcgat
     3541 ctggccggct cgcagcaggg agcgggcgtg caaaatcagg agctccggag cgtcggggaa
     3601 gcgctcgagc gcgggcgtga gccgagcttc tgcttcgtcg cgacggccga ggcgaacgag
     3661 cgtttcgacg aggcccgctt cggcgctcgg gtcgtttggt gagacctgga cgagccgttc
     3721 gtattgaacg agcgcttctt ccgtgagtcc ggcccggaag aggagccgcg ctaggttttg
     3781 gcgtgacggc gcgaagccgg ggtcgacgcg caacgcgtcg taataatgtc gagaggcgtc
     3841 atcggggcga cgctcgcgtt cggcgaggac gccgagcgca tggtgcggtt gtgccacgtc
     3901 ggggttgaga cgccgggccc gctcgcagag cagccgggcc cgctcgaagt tgccgcgctc
     3961 gagctcgacc aagccgagat tgacgagcgc ctcgacgaag tgcgggctgt attcgagcgc
     4021 gacgctcagc cgagcgtctg cggtctcgag gtcaccgtgc ttgaacgctt cgacccctgc
     4081 ggcattgagg gcggcagcct gtggtggcag cggcgcaccg gccgagcagc cggtaagtag
     4141 caagacgacc catcgacgca cgaggcttta tcggcacgag cgaagcgcga gtttcctgtc
     4201 cttcaaaacg gcgaaagtcc tagaccccct tgcgcggccg aggttcgcgt ggtttcaaga
     4261 ggcgcccatg gtgagcgaga gcgaccgaga cgtagcctcc gcggcggacg tagacgaaga
     4321 gcgccgcgag cggcggcccg tcaaaaagaa gaagccgaag ccgccggttc cgaccgacga
     4381 gcgcgagatc gacgcgcccg acaagc
//
LOCUS       DATIML010000628         1765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3878257, whole genome shotgun sequence.
ACCESSION   DATIML010000628 DATIML010000000
VERSION     DATIML010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3878257"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VLJ38_10770"
     CDS             complement(<1..465)
                     /locus_tag="VLJ38_10770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40046.1"
                     /translation="MKAERGMDFLFGRARLVLLIAAVLAAVCGVRAVLTYANLRSDLE
                     ELLPRSAPSVQALDQARRRLPGLRHLGVVVDTGRPENADAALRFLSDLEARVAHYPKE
                     LVAGVRSGVAAERHFIETRALALMEPSDVARLREAVEARHRWEVAHATGLSLL"
     gene            complement(462..1427)
                     /locus_tag="VLJ38_10775"
     CDS             complement(462..1427)
                     /locus_tag="VLJ38_10775"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSU40047.1"
                     /translation="MPPTLPERSALPHSPWSRLRALWGRWLLLPFLPTLYALVLVVFH
                     GNLRPEHLVIAALALALGVIGRRTAALYRELLPFFAVGIGYDCVRYARALWVTPERVL
                     SCSFRAAERAILPLPGGTTLPEWFMSHHVAAADLAAAVPYFAFVYFAIGYAIWLRFRD
                     PRKMAFFAWSFAFANWISFVVWILIPVAPPWYVHAHGCAVSLADVPSPAGLARVDALL
                     GVSYFAHFYARAASVFGALPSMHCAYPLLGLLTAWRGAGRKERALHVAYAVWMACSAV
                     YLAHHWVIDVVAGWTTAVLGVLLARFVLEPRSAETAQLPDARSAV"
     gene            complement(1408..>1765)
                     /locus_tag="VLJ38_10780"
     CDS             complement(1408..>1765)
                     /locus_tag="VLJ38_10780"
                     /inference="COORDINATES: protein motif:HMM:NF016060.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HSU40048.1"
                     /translation="MPLATLLGCIVGGTVAFSLSRLWVFRALRQSVRRQVVRFLFVSG
                     SSALLNAGGVWMMSLLPGVHPYVGWLITRALVFVCWNFPLHSEWAFPEREREGAERLP
                     PELGSGVGGKSAADAS"
BASE COUNT          358 a          614 c          612 g          181 t
ORIGIN      
        1 gagtaggctg agtccggtcg cgtgcgcgac ctcccagcgg tgccgtgctt cgacggcttc
       61 gcgcaagcgg gcgacgtcgc tcggctccat cagcgcgagc gcgcgcgtct cgatgaagtg
      121 gcgctccgcc gcgacgccgg agcgcacgcc cgcgacgagc tctttcgggt aatgggcgac
      181 gcgcgcctcg agatcggaga ggaaacgcag cgcggcgtcg gcgttctcgg gacggccggt
      241 gtcgacgacg acgccgagat ggcgcagacc cggcaagcgc cggcgcgcct ggtcgagcgc
      301 ctgcacggac ggagcgctcc ggggcaggag ctcctcgagg tcgctccgca aattggcgta
      361 cgtgagcacg gcgcgcacgc cgcacacggc cgcgagcacc gcagcgatca gcaacacgag
      421 ccgcgcgcgg ccgaacaaga aatccatgcc gcgttcggcc ttcacacggc gctccgtgcg
      481 tcgggaagct gcgccgtttc ggcgctgcgc ggctcgagga cgaagcgcgc gagcagcacg
      541 ccgaggaccg ccgtcgtcca acctgctacg acgtcgatca cccagtgatg cgcgaggtac
      601 acggccgaac acgccatcca aaccgcgtac gcgacatgta gcgcgcgctc cttacggccc
      661 gcgccacgcc acgccgtcag caagccgagc aacgggtaag cgcagtgcat cgagggcagc
      721 gcgccgaaca cgctcgcggc acgcgcgtaa aaatgcgcaa aatacgagac gccgagcagc
      781 gcgtccacgc gcgcgagtcc ggccgggctc ggcacgtcgg cgagcgatac ggcgcagccg
      841 tgagcatgca cgtaccaggg cggagcgacc ggaatcaaaa tccacaccac gaaagatatc
      901 cagttggcga acgcgaacga ccacgcaaag aaagccatct tacgtgggtc gcgaaaacgg
      961 agccaaatag cgtagccgat ggcgaaatac acgaaggcga agtacggcac cgccgccgcg
     1021 agatcggccg cggcgacgtg gtggctcatg aaccactcgg gcagcgtcgt gccgccaggt
     1081 agcggcaaaa tcgcgcgctc ggccgcgcgg aacgaacagg agagcacccg ctcgggcgtg
     1141 acccagagcg cccgcgcata gcgcacgcaa tcgtaaccga tgcccaccgc gaaaaacggc
     1201 aagagctcgc gatagagcgc cgcggtgcgc cggccgatca cgccgagcgc gagggccagc
     1261 gccgcgatca cgaggtgctc gggccgcagg ttgccgtgga acacgacgag cacgagcgcg
     1321 tagagcgtgg gcaagaacgg caggagcagc caccggcccc agagcgcgcg cagtcgtgac
     1381 cagggactgt ggggcagtgc gctccgctca ggaagcgtcg gcggcactct tgcctccgac
     1441 acccgagccg agctccggcg gcagccgctc ggcgccttcg cgctcgcgct ccgggaacgc
     1501 ccactcgctg tggagcggga aattccagca cacgaacacg agcgcgcgcg tgatgagcca
     1561 accgacgtag ggatgcacgc ccggcaagag cgacatcatc cacacgccgc ccgcgttcag
     1621 gagcgcgctc gacccggaga cgaacagaaa gcgcaccacc tgacgccgca cgctctggcg
     1681 cagcgcgcga aagacccaca gccgcgagag gctgaaggcg accgtgccgc cgacgatgca
     1741 gccgagcagc gtcgcgagcg gcatg
//
LOCUS       DATIML010000629         3338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1285794, whole genome shotgun sequence.
ACCESSION   DATIML010000629 DATIML010000000
VERSION     DATIML010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1285794"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..734)
                     /locus_tag="VLJ38_10785"
     CDS             complement(<1..734)
                     /locus_tag="VLJ38_10785"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40049.1"
                     /translation="MASALDAALDVSRRVPNGVSEQPLGWTPDRSAQRYQITGWGSPY
                     FQVNARGQIEVTPNPDRQQCINLYELTQELRARGLELPLLIRFSDIVADRIKRLNEAF
                     GKAIAEYEYPGSYRGVYPVKVNQQRHLVEEIVRYGRAWNFGLEAGSKPELLIALAAMQ
                     DVGGLIICNGYKDQKYIETALVAQKFDKTVIIVLERLEEIDLVFKASEKLGIRPLLGV
                     RAKLTTKGVGRWADSAGDRAKFGLTTS"
     gene            complement(976..1932)
                     /locus_tag="VLJ38_10790"
     CDS             complement(976..1932)
                     /locus_tag="VLJ38_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CAAX endopeptidase family protein"
                     /protein_id="HSU40050.1"
                     /translation="MTSPVVSAALPLTRLAEPSYFQSILAFTPVKALVPLPILAALAP
                     AVWWFFRDTWRVLDAEAAETRSLAGDRPDYRPAVALVIVAVVLTLQEYYGGRQVYDTL
                     LRPWLHELEAAGHPWLKTAEYDELYSYGWWALARVIGYVFVPLPLWKLIFPQDSLLDM
                     GLRGRGFLSHIWIYGLCLAVVLPAMLLVASQPDFGTYYPFYKSSSRSISDLLMWEAMY
                     GAQFFALELFFRGFLLGALRRTLGSAAIFAMAVPYCMIHYGKPYLETNGAIVAGIVLG
                     SLAMRTRSIYAGFLVHITVAFSMDFLALWRRDALPHVFWPLG"
     gene            complement(1949..>3338)
                     /gene="gltX"
                     /locus_tag="VLJ38_10795"
     CDS             complement(1949..>3338)
                     /gene="gltX"
                     /locus_tag="VLJ38_10795"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HSU40051.1"
                     /translation="YLHIGGARTALFNWLWAKSQGGVFVLRVEDTDQERSSIESVRAI
                     LDAFVWLGMDWDEGPEVGGAYGPYFQSERKAIYRELVEGLISKGHAYRCYCTKEELDR
                     AREELKQRNPKAQFVYPGTCRNRTDQPDLPHVVRFKSPRDGVTEFVDKVFGPISTPNA
                     AQQDFVLVRTDGYPLYNLAATIDDHLMDITLVARARDHIGNTPQQLLIYRALGWAPPE
                     FAHLPMMLSPKGEKLSKRHTSVSVQDYRDRGYPAAAVLNYIVRFGWSSGDQEIFSREE
                     LVRLFSWDRVNKSDGKFDDKKFADVAFEHLKREDLTPLPEYAKNVQPFLAERGLTAPD
                     PGTLAAAIPGIRERARTYRDAAADLDFYFREPPELDVKARDKLLNAEGAARLVELADT
                     LASRESWDAPGLEATVREWSEARGLAIKDVAQPARVALTGRSASPPLFEVMVVLGKER
                     SLARLRRAPSLV"
BASE COUNT          572 a         1047 c         1171 g          548 t
ORIGIN      
        1 gaagtggtga gcccgaactt cgcgcggtcc cccgccgaat ccgcccagcg cccgacgccc
       61 ttggtcgtca gcttggcgcg cacgccgagc agcgggcgaa tgccgagctt ttccgaagct
      121 ttgaagacga gatcgatctc ctccaaacgc tcgagcacga tgatgacggt cttgtcgaac
      181 ttctgcgcga cgagcgcggt ctcgatgtac ttctggtctt tgtagccgtt gcaaatgatg
      241 aggccgccca cgtcttgcat ggccgcgagg gcgatcaaga gctccggctt gctgcccgct
      301 tcgagcccga aattccacgc gcgcccgtaa cgcacgatct cctcgacgag gtggcgctgc
      361 tggttcactt tgacggggta aacgccgcgg tagctgcctg ggtactcgta ctcggcgatc
      421 gccttaccga acgcttcgtt caagcgcttg atgcgatcgg cgacgatgtc cgagaagcgg
      481 atgagcagcg gcagctcgag cccgcgcgcg cgtagctcct gcgtgagctc gtagaggttg
      541 atgcactgct ggcggtcggg gttcggcgtg acctcgatct gaccgcgcgc gttcacctgg
      601 aagtagggcg agccccagcc ggtgatctga tagcgctgcg cgcttcgatc cggtgtccaa
      661 ccgagcggtt gctcggagac cccgttcggc acgcggcgcg acacgtcgag agctgcatcc
      721 aatgcggaag ccatgagttt gccgccgtga atcgtcaaag aggttcctag tcgttcgccg
      781 aaatggaggc gcgtgggtgc gttcgccggt tcggagggac gcgcgaatgc gcggacggac
      841 tatagcggat ctcgggcggg aggcgacgcc gatccgacgc acgccgggga cggtttcgtc
      901 ggcgctcggg gaagcccctc acgtgaggcg ctgctcggcc gccgctcttc gtcatgtcgt
      961 cacccgttcg tcccgtcacc cgagcggcca gaacacgtga ggcaaagcgt cgcgtcgcca
     1021 gagcgccagg aaatccatgg aaaacgcgac ggtgatatgc acgagaaacc cggcgtagat
     1081 gctgcgcgtc cgcatcgcga gcgagccgag cacgatgccc gccacgattg ccccgttcgt
     1141 ctcgaggtac ggcttgccgt agtggatcat gcagtagggc acggccatcg cgaagatagc
     1201 cgccgagccg agcgtgcgcc ggagcgcgcc gagcaggaac cccctgaaaa atagctccag
     1261 cgcgaagaac tgcgcgccgt acatcgcctc ccacatcaaa agatcggaga tgctgcgcga
     1321 gctcgacttg tagaagggat agtaggtgcc gaagtccggc tgactcgcga cgagcagcat
     1381 cgcgggcagc accacggcga ggcagagccc gtagatccag atgtggctca gaaagccgcg
     1441 cccgcgcagg cccatgtcga gcaagctgtc ctggggaaaa atgagtttcc agagcggcag
     1501 cgggacgaac acgtagccga tgacgcgcgc gagcgcccac cagccgtagc tgtagagctc
     1561 gtcgtactcg gccgtcttga gccaggggtg tccggcggcc tcgagctcgt ggagccatgg
     1621 gcggagcagg gtgtcgtaca cctggcgccc cccgtaatac tcctggagag tgagcacgac
     1681 ggcgacgatg acgagcgcca cggcggggcg gtagtccggg cgatcgccgg cgagcgagcg
     1741 tgtttcggcg gcttcggcgt cgagcacgcg ccaggtgtcg cgaaagaacc accacaccgc
     1801 cggcgcgagc gccgcgagga tgggcagcgg cacgagcgcc ttcacgggcg tgaaggcgag
     1861 aatcgattgg aagtaagacg gctcggcgag ccgagtgagt ggaagcgcgg cagaaaccac
     1921 ggggctcgtc atcggcgggg tggcgagcct acacgaggct cggcgcgcgc cggaggcgag
     1981 cgagggagcg ctccttgccg agcactacca tcacctcgaa gagcggcggg ctcgccgagc
     2041 ggcccgtgag cgccacccgc gcgggctgtg ccacgtcctt gatcgccagg cctcgtgcct
     2101 ccgaccactc ccggacggtc gcttcgaggc cgggtgcgtc ccagctttcg cggctcgcga
     2161 gcgtgtcggc gagctcgacg agccgcgcgg cgccttcggc gttgagcagc ttgtcccgcg
     2221 ccttcacgtc gagctccggc ggctcccgga aataaaagtc gaggtcggcg gccgcgtccc
     2281 ggtacgtgcg cgcgcgctcc cggatgccag ggatggcggc cgcgagcgtc ccggggtccg
     2341 gcgccgtcag gccccgctcg gcgaggaacg gctggacgtt cttggcgtac tcgggcagcg
     2401 gggtgaggtc ctcgcgcttc agatgctcga acgccacgtc cgcgaacttc ttgtcgtcga
     2461 atttgccgtc gctcttgttg acgcggtccc aggaaaagag ccgcacgagc tcctcgcggc
     2521 tgaagatttc ctggtcgccc gaggaccagc cgaaacggac gatgtagttc aacacggccg
     2581 cggcaggata gccgcggtct cggtagtcct gaaccgagac ggaggtgtgg cgcttgctga
     2641 gcttttcgcc cttgggcgag agcatcatgg gcaggtgcgc gaattcgggc ggggcccagc
     2701 cgagcgcgcg gtagatcagg agctgctgcg gcgtattgcc gatgtgatcg cgggcgcgcg
     2761 cgaccagcgt gatgtccatc aggtggtcgt cgatggtcgc ggcgaggtta tagagcgggt
     2821 agccgtcggt gcggaccagc acgaaatcct gctgcgcggc gttgggcgtc gaaatggggc
     2881 cgaagacctt gtcgacgaat tccgtgacgc cgtcgcgcgg cgatttgaag cgcacgacat
     2941 ggggcaagtc gggctgatcg gtgcggttcc tgcaagtgcc ggggtagacg aactgcgcct
     3001 tggggtttcg ctgcttgagc tcctcgcggg cgcggtcgag ctcctctttg gtgcagtagc
     3061 agcggtaggc gtgccccttc gagatcaggc cctcgacgag ctcgcggtag atcgccttgc
     3121 gttcgctctg gaagtagggg ccgtaagcgc cgccgacctc ggggccctcg tcccaatcca
     3181 tgccgagcca gacgaaggca tcgaggatcg cgcgcacgct ctcgatgctc gagcgctcct
     3241 gatcggtgtc ctcgacgcgg agcacgaaga ctccgccctg gcttttggcc cagagccagt
     3301 tgaaaagcgc tgtacgcgct ccaccaatgt gcaaatac
//
LOCUS       DATIML010000630         4250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5614688, whole genome shotgun sequence.
ACCESSION   DATIML010000630 DATIML010000000
VERSION     DATIML010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5614688"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..846)
                     /locus_tag="VLJ38_10800"
     CDS             complement(<1..846)
                     /locus_tag="VLJ38_10800"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HSU40052.1"
                     /translation="MTPERVERALLEATREARSEQLPHVDWTAIEDQLPMTRVHTVPP
                     RPFNVRPWLLAASFAAAGVALGFALRQPEPHRAVVARSNTHTPAASVAPKTNQDINGD
                     ALAPGAHVAATDLPQTVIHAGHARWTLAPHSEGTLLANGDIVTVRLDRGSVTSRVTKS
                     SRTETFAVEAADVRVAAHGTEFVVSLGADGVSVSVTEGSVLVGPREEAGTGQLLISPA
                     AKRYSLAGAPAEDDRGLEALGAHPTRGRTTAEEPAASASASADSRLALEAGLRKAPAK
                     RTVPSA"
     gene            complement(843..1472)
                     /locus_tag="VLJ38_10805"
     CDS             complement(843..1472)
                     /locus_tag="VLJ38_10805"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU40053.1"
                     /translation="MSDGSDGSDLVARCKTGEPAAFRQLFREHRASVTRLVHRMTGGS
                     PDLEDLVQEVFVQVHKSLGSFRREARLGTWIYRIAVNVVLMHRRALRSRPSTIHATDD
                     AVIVDDDQPDEQLARRRRVAALYRLLDGMSEKKRTVYVLHEIEGLSPAEISKIVGAPV
                     LTVRTRLFYARRSLHADLMQEPALAALAEALPPLSEPAPASPEPHKEPA"
     gene            complement(1650..1787)
                     /locus_tag="VLJ38_10810"
     CDS             complement(1650..1787)
                     /locus_tag="VLJ38_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40054.1"
                     /translation="MTPRLIESASNGKPVAGPAKTRLLRAVNHILEQKKQKPVDLKTV
                     F"
     gene            2042..2872
                     /locus_tag="VLJ38_10815"
     CDS             2042..2872
                     /locus_tag="VLJ38_10815"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HSU40055.1"
                     /translation="MATELDEAVRVVEALSLGAPAIGVVLGSGLGAFAAALDGRVAVP
                     YRDIPGFPPPSVSGHGGELVFGRVRGVLVACLSGRVHLYEGHAPNKVVFGVRLLAALG
                     CGIVLVTNAAGGIREGLTPGGLLLLRDHVNLTGTNALVGPNEPPFPRFPDMSAAYDIR
                     CRDIAREVARDEALELDEGVYAGVLGPSYETPAEIRMLRTLGADAVGMSTVLEVIALR
                     HRGVRVGAVSVITNMAAGLSNAPLDHAEVQATGAAARDRLERLLSGWIERLAPEVALG
                     "
     gene            2865..3269
                     /gene="cdd"
                     /locus_tag="VLJ38_10820"
     CDS             2865..3269
                     /gene="cdd"
                     /locus_tag="VLJ38_10820"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF004064.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0008655 - pyrimidine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HSU40056.1"
                     /translation="MAELTSAESRLVEAARSARERAYAPYSAFRVGAALETESGKLFS
                     GVNVENASYGATVCAERVAVFSMVAAGERNVKRIAVYTEAPQLSMPCGLCRQVLVEHA
                     PRADVIVAGPSGARTTTLAALLPEPFVFEVSR"
     gene            3266..4024
                     /locus_tag="VLJ38_10825"
     CDS             3266..4024
                     /locus_tag="VLJ38_10825"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HSU40057.1"
                     /translation="MTRASPVVPPRIIPGTPPEIVVYDEPHDCPYVPGRVAVLPLRVP
                     SRRLTGDELEMRLAAGDRRQGMFLYRTACPQCRACEPIRLDVESYLPNRSQRRALARG
                     DAAIRYEVGPPVLDDARVALYNKHKQLRSLGDGEIDLAGYRQFLVMTCCESFEIRYTL
                     DGVLVGIALVDRSTDALSAVYCFYDPSLPELSLGTYSILKQIELCKTWGLRYLYLGLY
                     IGDCERMRYKSRFLPHERLLDGRWVMIERASDQE"
     gene            4021..>4250
                     /locus_tag="VLJ38_10830"
     CDS             4021..>4250
                     /locus_tag="VLJ38_10830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40058.1"
                     /translation="MSVAWLNEAGGLRYHLRGARYAESLWQPFRFALAEWLYAWQPPE
                     KKLVVVGASGGWCVQPFFYERFTDVLCLEPDPL"
BASE COUNT          600 a         1393 c         1507 g          750 t
ORIGIN      
        1 ggccgagggt acggtacgtt ttgcgggcgc cttcctgagc ccggcttcga gcgccaggcg
       61 tgagtccgcg ctcgccgacg cgcttgctgc tggctcttcc gccgtcgtac ggccgcgcgt
      121 cgggtgcgca ccgagcgctt cgagcccgcg atcgtcctcc gcgggggctc ccgctagcga
      181 gtagcgcttg gctgcggggc tgatgaggag ctggcccgtg ccggcctctt cgcgcgggcc
      241 gacgagcacg gagccttccg tgacgctcac ggacacgccg tcggcgccga ggctcacgac
      301 gaattcggtg ccgtgcgcgg cgacgcgcac gtcggcggcc tccaccgcga acgtttccgt
      361 gcgcgagctc ttggtgacgc gcgaggtgac gctgccgcga tcgagccgca cggtgacgat
      421 gtcgccgttc gcgagcagcg tgccttcgct gtggggagcg agcgtccagc gcgcgtgccc
      481 cgcgtggatg acagtttgcg gcagatcggt ggcggcgacg tgcgcgccgg gcgccagcgc
      541 atccccgttg atgtcctggt tcgtcttcgg tgcgacgctc gcggccggcg tgtgcgtgtt
      601 cgagcgcgcg accaccgctc tgtgcggctc cggctgacgc agcgcgaacc cgagcgcgac
      661 gcccgcagcg gcgaagcttg cggcgagcag ccagggacgc acgttgaatg gacgcggcgg
      721 gacggtgtgc acgcgcgtca tcggcagctg gtcctcgatg gccgtccaat ccacgtgcgg
      781 cagctgctcg gagcgcgctt cgcgcgtggc ctcgaggagc gcacgttcga cgcgttcggg
      841 cgtcatgctg gctccttgtg tggctcggga ctcgccggag cgggttcgga aagtggcggc
      901 agcgcttctg ccagcgccgc gagagcgggt tcttgcatca agtctgcgtg tagggagcgg
      961 cgcgcgtaaa acaggcgcgt ccgcacggtg aggaccgggg cgcccacgat tttcgaaatc
     1021 tcggcgggcg agagcccttc aatctcgtgg agcacgtaca cggtgcgttt cttttcgctc
     1081 ataccgtcga gcagccgata cagggccgcg acgcggcgtc gtcgcgcgag ctgctcgtcc
     1141 ggttggtcgt cgtcgacgat gacggcgtcg tcggtcgcgt ggatggtcga ggggcggctc
     1201 cgaagcgccc gccggtgcat gagcacgaca ttgacggcaa tgcgatagat ccaggtgccg
     1261 agccgcgctt cgcgccggaa gctgcccagg ctcttgtgga cctgaacgaa gacctcttgg
     1321 acgagatctt cgagatccgg gctgccaccg gtcatgcggt ggaccaagcg cgtcacgctg
     1381 gcgcggtgtt cgcgaaagag ctgtcggaac gccgccggct cgccggtctt gcaccgcgcg
     1441 accaggtcac tcccgtcact cccgtcgctc acgacgcaca gggtagcgct ttcgggtggc
     1501 gtgcgctcgc gcgccgagtc cacgcggtgt tcacccgacg tcgacgcgga ccaggttccc
     1561 cggcggacgc tcgagatctc ggaaagtgaa gctggcctca ccgagcggat tcgttgccgc
     1621 ccgctcgcgg ttcattcagg agcgaaggct caaaagaccg tcttgagatc gacgggcttc
     1681 tgcttcttct gctcgaggat gtggttgacc gcgcgcagga gccgggtctt ggccgggccc
     1741 gccacgggct tgccgttcga ggcggactcg atgagccggg gcgtcacggg gcgacctgag
     1801 cgcggtttcg ccggcttggt ctcgctttcg gtcttggggg cgccttcagc tttgctctgc
     1861 ctctgggcga acttgagctt ccgatcttgg ggtcggaggc gctcgatgcg gaccgaaacg
     1921 gccaaaaggc ggcgagcgtc aatcttgtta tcctggagga actgcgcgaa cttggttgcc
     1981 atgagggctc cagcagcact cgctcggcga gcgccggcca aaaggggagc gcccctatag
     2041 catggccacc gagcttgacg aagccgtccg ggtggtcgag gccctttcgt tgggggcccc
     2101 agccatcggg gtcgtgctcg ggtccggtct gggcgctttc gccgccgcgc tcgatggcag
     2161 ggtggcggtc ccatatcgag acatcccagg cttcccgccg ccgagcgtct cggggcacgg
     2221 cggcgagctc gtctttggtc gcgtgcgggg cgttttggtg gcgtgtcttt ctggtcgcgt
     2281 gcacttgtac gaagggcacg cgccgaacaa ggtcgtcttc ggcgtgcgac tcctcgccgc
     2341 gctcggctgt ggcatagtgc tcgtgacgaa tgccgctgga ggtattcgtg agggactgac
     2401 accgggagga ttgctcctcc tccgagatca cgtcaattta accggaacga acgcactcgt
     2461 cggtcctaac gagcctccgt tcccacggtt tcccgacatg agtgctgcct acgacatccg
     2521 ctgtcgcgac atcgcgcgcg aggtcgcacg agacgaagcg ctcgagctcg acgaaggtgt
     2581 gtacgcgggc gtgctcggtc cgagttacga gacgcccgcc gagatccgca tgctgcgcac
     2641 gctcggtgcg gacgcggtcg gcatgagcac ggtgctcgaa gtcatcgcgc tcagacaccg
     2701 gggcgtgcgt gtcggcgcgg tgagcgtcat caccaacatg gcggccggtt tgtcgaacgc
     2761 gccgctcgac cacgccgaag tgcaagcgac gggtgccgcc gcgcgcgatc ggctggaacg
     2821 gctactttca ggctggatcg aacgacttgc cccggaggtc gcgcttggct gagctcacgt
     2881 ccgccgagtc acgcttggtc gaggcggcgc ggtcggcgcg cgagcgtgcg tacgcgccgt
     2941 actccgcgtt ccgcgtgggc gccgcgctcg agacggagag cggtaaactt ttttccggag
     3001 tgaacgtaga gaacgcgtcc tacggcgcga cggtgtgcgc cgaacgggta gcggtgttct
     3061 cgatggtcgc agccggtgaa cgcaacgtga aacgcatcgc cgtgtacacg gaagctccgc
     3121 agctcagcat gccgtgcggc ctgtgccggc aggtgctggt cgagcacgcg ccgcgcgccg
     3181 acgtgatcgt cgcgggaccg agcggcgcgc gcacgacgac gctcgcggcg ctcctgcccg
     3241 agcccttcgt cttcgaggtg tcgcgatgac gcgcgcgagt ccggtcgttc cgccacgcat
     3301 cattccgggc acgccgcccg agatcgtcgt gtacgacgag ccgcacgact gcccctacgt
     3361 gcccgggcgt gtcgccgtgt tgccgctgcg cgtcccgtcg cggaggctca cgggtgacga
     3421 gctcgaaatg cggctcgcgg ccggggaccg ccgtcaaggc atgttcctct accgcacggc
     3481 gtgcccgcag tgccgcgcct gcgagccgat tcgcctcgac gtcgagtcgt acctgccgaa
     3541 ccgctcgcaa cggcgggcgc tcgcgcgcgg tgacgccgcc atccgctacg aagtagggcc
     3601 gcccgtcctc gacgacgcgc gcgtcgctct ctacaacaag cacaagcagc tgcgctcgct
     3661 cggcgacggg gagatcgatc tcgcgggcta tcgccagttt ctggtgatga cgtgctgcga
     3721 gagcttcgag atccgttaca cgctcgacgg cgtgctcgtg ggcatcgcgc tcgtcgatcg
     3781 cagcaccgac gcgctgtcgg ccgtctactg cttctacgat ccgagcttgc cggagctcag
     3841 cctcggcacc tactcgattt tgaagcaaat cgagctgtgt aagacctggg ggttacggta
     3901 cctgtacctc gggctttaca tcggtgactg cgagcgcatg cgctacaaat cgcgcttctt
     3961 gccgcacgaa cggctgctcg acgggcgctg ggtgatgata gagcgcgcga gcgaccagga
     4021 gtgagcgtcg cctggctcaa cgaagccggc gggcttcgct accacctgcg gggcgcgcgt
     4081 tacgccgaga gcctctggca gccgtttcgc ttcgcgctcg ccgagtggct ctacgcctgg
     4141 cagccccccg aaaaaaagct cgtcgtcgtg ggggcgagcg gcggctggtg cgtgcagccg
     4201 ttcttctacg agcgcttcac ggacgtgctc tgcctcgagc cggacccgct
//
LOCUS       DATIML010000631         1985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2724932, whole genome shotgun sequence.
ACCESSION   DATIML010000631 DATIML010000000
VERSION     DATIML010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2724932"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..990)
                     /locus_tag="VLJ38_10835"
     CDS             complement(<1..990)
                     /locus_tag="VLJ38_10835"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HSU40059.1"
                     /translation="MTTSTAANPNARRIILARLRALRVAGTTFTRPADAVAWLGAVQA
                     QDYLGALWAVGLRLMRATELDVEQALADATIVRTWPMRGTLHFVAAADARWLTELLAP
                     RAVTAGASRMRELGIDTGVLKRARAIIAKELEARRWLSRPDVYRVLEEGGIATANQRG
                     IHVLWRLAQECFICFGPRVGRQPSFVLFDDWLPHARRLRGDEALAALAVRYFTSHGPA
                     TARDLAWWSGLALGEARRAVLAAGAALSHVTLDGDEYLSAAATESLGRAQRVCVLPPF
                     DELLVGYRYGGTFVDAAVTKRVRSGGVIRAVVVVDGHVAGTWGRRLTAREVTCK"
     gene            complement(1020..1604)
                     /locus_tag="VLJ38_10840"
     CDS             complement(1020..1604)
                     /locus_tag="VLJ38_10840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40060.1"
                     /translation="MIAGHFGFAMAVKARERSVPLWLMLLGCQWLDIVFVPLFVAGIE
                     RIEPLAGTQPGGYGSGVIYADYTHSLVGAVLLSLLFGAVSGARHGRRAGVVLALVAFS
                     HWLLDLPLHRADMPLLPGNAGHLPRLGFGLWQFPVVSAALELALVLGGSLLYWRAALG
                     VAEVEPALVRRAHVCGALALVTGLVTLGLNLAGM"
     gene            complement(1706..>1985)
                     /locus_tag="VLJ38_10845"
     CDS             complement(1706..>1985)
                     /locus_tag="VLJ38_10845"
                     /inference="COORDINATES: protein motif:HMM:NF024701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TetR-like C-terminal domain-containing protein"
                     /protein_id="HSU40061.1"
                     /translation="QATQARTDSLAPALPTFAALVGAPAALAAARVLTPFLHGFVAME
                     LAGAFRLGGGIDEAFEHGVATILAGLAPKRRAPRRPGQSTRKQRTRQE"
BASE COUNT          342 a          698 c          694 g          251 t
ORIGIN      
        1 cttgcaagtg acctcccgcg ccgtcagtcg gcgtccccag gtgccagcga cgtggccgtc
       61 cacgacaacg accgcacgaa tcaccccgcc ggaacgtacc cgtttcgtga ccgccgcatc
      121 gacgaacgtc ccgccgtacc gataccccac gagcagctcg tcgaaaggcg gtagcacgca
      181 cacccgttgc gcacggccga gcgactccgt ggccgcggcg ctcaagtatt catcaccgtc
      241 caacgtcacg tggctgagcg ctgcgcccgc cgccagcacg gcccggcgcg cctcgcccag
      301 cgcgaggccg gaccaccacg cgagatcgcg cgccgtcgcg gggccgtggc tcgtaaaata
      361 gcggacggcg agcgcggcga gtgcctcgtc tccgcggagc cgccgcgcgt gcggtagcca
      421 atcgtcgaac agcacgaacg acggttgcct gcccacgcgc gggccgaagc agatgaagca
      481 ttcctgggcg agccgccaca agacgtggat cccgcgttga ttggcggtgg caatgccccc
      541 ctcctcgagc acgcgataaa catcgggccg cgacagccag cggcgagcct cgagctcctt
      601 cgcgatgatg gcgcgcgcgc gtttgaggac cccggtgtcg atacccagct cgcgcattcg
      661 gctggcgccc gccgtgacgg cgcgcggagc cagcagttcg gtgagccagc gcgcgtcggc
      721 ggcggcgacg aaatggagcg tcccgcgcat cggccaggtg cgcacgatgg tcgcgtcggc
      781 gagcgcttgc tccacgtcga gctccgtcgc tcgcatgagc cggagcccga cggcccagag
      841 cgcgccgagg tagtcttgtg cctgaacggc gccgagccac gcgacggcgt cggctggtcg
      901 cgtgaacgtc gtccctgcga cgcgtagcgc gcgaagtctc gcaaggatga tccggcgcgc
      961 gttggggttt gccgccgtcg atgtcgtcat gcgcaatgcc cgacgatagc gcgggcgtac
     1021 tacatgcccg cgaggttgag gccgagcgtc acgagtcccg tgacgagggc cagcgcgccg
     1081 cacacgtgag ctcgccgcac gagcgctggt tcgacttctg ccacgccgag cgcggcgcgc
     1141 caataaagga gcgagcctcc gaggacgagc gcgagctcga gcgctgcgga gacgacgggg
     1201 aactgccaca agccgaaacc gaggcgcggc agatggccag cattgccggg caagagcggc
     1261 atgtccgcgc gatgtagcgg caggtcgagc agccagtgcg aaaacgccac gagcgccaag
     1321 acgacgcccg cgcgccgccc gtgccgcgcg ccggagaccg caccgaagag cagcgacagc
     1381 agcacggcac ccacgagcga gtgcgtgtaa tcggcgtaga tcacgccgct gccgtagccg
     1441 cccggctgcg tcccggcgag cggctcgatg cgttcgatgc ctgcgacgaa gagcggcacg
     1501 aacactatgt cgagccactg gcaaccgagc aacatgagcc agagcggcac gctacgttcg
     1561 cgcgccttca ccgccatggc gaagccgaaa tgacccgcaa tcacgagcga gctccgcgcg
     1621 cttcgcgccc gacccagggc aggcgccgat cgaggcgccc gagcacgatc acgtacacga
     1681 tgaggcccaa tacgaatgac atggcttact cctgacgggt gcgctgcttg cgcgtgctct
     1741 ggccggggcg acgaggcgcc cggcgctttg gcgcgagacc ggcgagtatc gtcgccacgc
     1801 cgtgttcgaa cgcttcgtcg atgccgccgc cgagccgaaa tgcgcccgcg agctccatcg
     1861 cgacgaagcc gtgcaagaag ggtgtgagca cgcgtgcggc cgccagtgct gccggtgctc
     1921 cgacgagcgc ggcgaaggtg gggagggcgg gcgccaggct gtccgtgcgc gcttgggtcg
     1981 cttgg
//
LOCUS       DATIML010000632         3758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_708048, whole genome shotgun sequence.
ACCESSION   DATIML010000632 DATIML010000000
VERSION     DATIML010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3758
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_708048"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="VLJ38_10850"
     CDS             complement(<1..367)
                     /locus_tag="VLJ38_10850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40062.1"
                     /translation="MKSRTAFRVRVTLLLSVLAVVVLYAVHDVLTRHARTEWRRPLDI
                     AFVLVTGPGVDAAAVTALRARVPDLAARLTSELHRYRPGAPAPFAFTRYGPTPLAESP
                     PAPEDGFVGAVRYAYALHRF"
     gene            complement(402..2000)
                     /locus_tag="VLJ38_10855"
     CDS             complement(402..2000)
                     /locus_tag="VLJ38_10855"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HSU40063.1"
                     /translation="MRRVRRALLALSVLVLVAFSGARHAVADGPVLHEFIPPDPNEDL
                     ALHATTRDGRLPAAVDTPSGVLPAPPDRRAPPENAYGGNATPDSIDASYRIDGDTTRP
                     EVVSYDDPFIPAVTPFKRLYAYDAVDESVELIVSDRRLRKVETGGVALPGEDQFFADL
                     FVDAAPGVPVRIPSPGPGARILATRVEPASPIEIVRDGADNWFLVGTTRQRIRLVLEL
                     AVPRASFGSPFPDVSWGSLVPRVPLLPRAVRDVARDVLHALGLSQSVSPRDALAALVA
                     HFRAFAPSEDLPRSRLPAELYRELALSKKGVCRHRAFAFTITALALGLPTRLVRNEAH
                     AWVEVGDGAIWHRIDLGGAAGRFELDPGAQAQLHVPPDDPFVWPPGAQSAAGALSASG
                     LAPGAGNVPTPGAAPSGSSQAASAPTATEPSSDAPPATSAEPSNGRPAAQIELGVEGA
                     EARRGAHLKVHGAVASEGEGCPGARVDLALRAQDGRLSPLGSVPTDAHGRFAAELTVP
                     LALAVGDYALVATTPGAGLCGASR"
     gene            complement(2061..2978)
                     /locus_tag="VLJ38_10860"
     CDS             complement(2061..2978)
                     /locus_tag="VLJ38_10860"
                     /inference="COORDINATES: protein motif:HMM:NF036967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel"
                     /protein_id="HSU40064.1"
                     /translation="MAHAPPLAVATETTLTSPGRQTYQVRIIGAPRTPLRDFYHALLQ
                     LNWPATVGFIALVYFGVNVVFAAAYFECDGIEHADPHSFLDAFYFSVQTMGTIGYGFM
                     YPKTHFANGVVVVESTASLVLTALATGLVFAKFSRPTARLMFSEHMTLAPMNGVPTLS
                     FRVGNQRRNRIVEAQIRLVLTRTERTLEGKDFYRSTDLKLVRDRLSLTRSWNVLHVVD
                     ETSPLFHETPESLAAAGVEFNVSVSGLDDTWMQIVHAQYRYPAEQVAFGYRPVDILTE
                     APNLMTLDLTKFHDIEPTEPRPDFPYPRG"
     gene            complement(2957..3571)
                     /locus_tag="VLJ38_10865"
     CDS             complement(2957..3571)
                     /locus_tag="VLJ38_10865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40065.1"
                     /translation="MSVPPVPPRTWVRFCVDTGVTPPPNTQVDRYRVEAVRTLRGAPL
                     AGISPGARLLRLESTHELPPGGGDIVGVTQQLLYTRAAERADLATTQPPGSDALCVLI
                     PVTKSEAWWQLALDERDALFRGAGTRTGHVALGLPLARTLLRKLYHGRPLAGAGWDLL
                     AYLECAPSERPQFEALLAGLRDPERNPEWNYVEREAEIWLTRHP"
BASE COUNT          582 a         1181 c         1459 g          536 t
ORIGIN      
        1 tgaagcgatg caacgcgtag gcgtagcgca cggccccgac gaagccgtcc tcgggcgccg
       61 gcggcgactc ggcgagcggg gtcgggccgt agcgggtgaa cgcgaagggc gccggcgcgc
      121 ccgggcgata gcggtggagc tcgctcgtga ggcgcgcggc gaggtcggga acgcgcgcgc
      181 gcagggccgt cacggcggca gcgtcgacgc cgggcccggt gacgagcacg aacgctatgt
      241 cgagcggacg gcgccactcg gtgcgagcgt gacgcgtgag cacgtcgtgc acggcgtaga
      301 gcacgaccac ggcaagcacg gagagcagca gcgtgacgcg cacgcggaac gccgtgcggc
      361 tcttcactcg tgcaccattc gccgattccc agacggcggc actagcggct cgcgccgcac
      421 aatcccgcgc ccggcgtcgt cgccacgagg gcgtagtcgc ccacggcgag agcgagcggc
      481 accgtgagct cggccgcgaa gcggccgtgc gcgtccgtcg gtacggagcc gagcggcgag
      541 agtcgcccgt cttgcgcgcg aagggccaaa tcgacgcgcg cgcccgggca cccttcgcct
      601 tcagaggcga cggcgccgtg cactttgagg tgcgcgccgc gccgcgcttc cgcgccctcg
      661 accccgagct cgatctgcgc ggcggggcgg ccgttcgacg gttccgcgga ggtcgcgggc
      721 ggcgcgtcgc tcgagggttc agtcgcggtc ggcgcggagg cggcttggct cgagccggac
      781 ggcgccgctc cgggagtcgg cacgttgccg gcgcccggtg cgagcccgga cgcgctgagc
      841 gcacccgcgg cgctctgagc gcccggcggc caaacgaagg gatcgtcggg cgggacgtgc
      901 agttgcgctt gcgcacccgg atcgagctcg aagcggcccg cggcgccgcc cagatcgata
      961 cggtgccaga tcgcgccgtc tccgacttcg acccaggcgt gcgcttcgtt gcggacgagg
     1021 cgcgtcggca gcccgagcgc gagcgccgtg atcgtgaacg cgaacgcgcg atgacggcac
     1081 acgccttttt tggagagcgc gagctcacga tagagctcgg cgggcaggcg cgaacgcggc
     1141 aaatcctcgg acggagcgaa cgcccgaaaa tgcgcgacga gcgccgcgag cgcgtcgcgc
     1201 gggctcacgc tctgggacaa gccgagcgcg tggagcacgt cgcgcgcgac gtcgcgtacg
     1261 gcgcgcggca agagcggtac gcgcggcacg aggctccccc agctcacgtc ggggaatggc
     1321 gagccgaagg acgcccgagg cacggcgagc tccagcacga gtcggatgcg ctgacgggtc
     1381 gtgcccacca aaaaccaatt atcggccccg tcgcgcacga tttcgatggg cgacgccggc
     1441 tcgacgcgcg tcgcgagaat gcgcgcgcct ggtccgggac tcgggatgcg caccggcacg
     1501 ccgggcgcgg catcgacgaa gagatcggcg aagaattggt cttcgcccgg cagcgcgacg
     1561 ccgcccgtct cgactttgcg cagccggcga tcggacacga tgagctcgac ggattcgtcg
     1621 acggcgtcgt acgcgtagag gcgcttgaac ggtgtgacgg cggggatgaa cgggtcgtcg
     1681 tagctcacga cttccgggcg cgtggtgtcg ccgtcgatac ggtagctcgc gtcgatgctg
     1741 tcgggcgtgg cgttgccgcc gtacgcgttt tcgggcgggg cgcggcggtc gggcggcgcg
     1801 ggcagcacgc cgctcggcgt gtctaccgcg gcgggcaggc ggccgtcgcg cgtggtggcg
     1861 tggagcgcca ggtcctcgtt cgggtcgggc gggatgaact cgtggaggac ggggccgtcg
     1921 gcgaccgcgt gccgcgcgcc ggagaaggcg acgagcacga gtacggagag agcgaggagc
     1981 gcacggcgaa cgcggcgcat acgcgcgagt gtaggaccgc ttcgacgacg ccgcacgtgt
     2041 gcaagcgaga ggtggtcgct tcagccgcgc ggatagggga agtccgggcg cggttcggtc
     2101 ggttcgatgt cgtggaactt ggtgaggtcg agcgtcatga ggttcggggc ctcggtgagg
     2161 atgtcgacgg ggcggtagcc gaaggcgact tgttcagccg ggtaacggta ctgcgcgtgg
     2221 acgatttgca tccaggtgtc gtcgaggccg ctcacgctga cattgaattc cacgcccgcc
     2281 gcggcgagcg actcgggcgt ctcgtggaac agcgggctcg tttcgtcgac gacgtggagc
     2341 acgttccagg agcgcgtgag cgacaggcgg tcgcgcacga gcttgagatc ggtcgagcgg
     2401 tagaagtcct tgccttcgag cgtgcgctcg gtgcgcgtca gcacgagccg gatctgcgcc
     2461 tcgacgatgc ggtttctgcg ctggttgccg acgcggaacg aaagcgtcgg cacgccgttc
     2521 atgggcgcga gcgtcatgtg ctcggagaac atgaggcgcg cggtcgggcg cgagaacttc
     2581 gcgaacacga ggccggtcgc gagcgccgtc aagactaggc tcgccgtcga ttcgacgacg
     2641 acgacgccgt tcgcgaagtg cgtcttcggg tacatgaagc cgtagccgat cgtgcccatg
     2701 gtttggacac tgaagtagaa cgcgtcgagg aacgaatgcg gatcggcgtg ctcgatgccg
     2761 tcgcattcga agtacgcagc cgcgaagacg acgttcacgc cgaaatagac gagcgcgatg
     2821 aagccgaccg tcgccggcca gttgagctgc aagagcgcgt ggtaaaaatc gcggagcggc
     2881 gtgcgcggcg cgccgatgat gcgcacctgg tacgtctgac ggcccggact cgtgagcgtc
     2941 gtttcggtcg cgacggctaa gggtggcgcg tgagccaaat ttccgcctcg cgttcgacgt
     3001 agttccattc ggggttgcgc tccggatcgc gcagcccggc gagcagcgct tcgaattgcg
     3061 ggcgttcgga cggcgcgcat tcgaggtagg cgagcaagtc ccagccggcg ccggcgagcg
     3121 gacggccatg atagagcttt cggagcagcg tgcgggcgag cggcaggccg agcgcgacgt
     3181 ggccggtgcg cgtcccggcg ccgcggaaga gcgcatcgcg ttcgtcgagc gcgagttgcc
     3241 accaggcttc ggacttggtg acgggaatga ggacgcagag ggcgtcggag ccgggtggct
     3301 gcgtggtcgc gaggtcggcg cgttcagccg cccgggtgta gaggagctgc tgcgtcacgc
     3361 cgacgatatc gccgccacct gggggaagct cgtgcgtgga ctcgagccgg agcaggcgcg
     3421 cgcccggcga gatgccggcg agaggggcgc cgcgcaaagt gcgaacggcc tcgacgcgat
     3481 agcgatcgac ttgggtgttg gggggcgggg tgactcccgt gtcgacacag aagcggaccc
     3541 aggtccgagg aggtacgggc ggcacggaca tcgcgactcg cgcttagcat tttctgtgtt
     3601 tcgcgacttt tccatgcaga acctggcgtg cgggcgcgcc gccatcaaaa tgggctcacg
     3661 ttggcccgct ctcacttctt gcttcgctct gtcctgcttt cgacggtcct cttcgcggca
     3721 gcgagcagca gcgggtgcgg ctcgagcgag tcccgacc
//
LOCUS       DATIML010000633         3934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4168969, whole genome shotgun sequence.
ACCESSION   DATIML010000633 DATIML010000000
VERSION     DATIML010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3934
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4168969"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /locus_tag="VLJ38_10870"
     CDS             complement(<1..677)
                     /locus_tag="VLJ38_10870"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSU40066.1"
                     /translation="MKRLPFGTASSRIRVGISGWRYAPWRGVYYPKGLRQADELAFAA
                     NDFSTIEINGSFYSLQNPSCYRQWYKATPPDFVFAIKGSRFITHMLRLRNVERALANF
                     LASGPLCLEEKLGPILWQFPPTLQLDERFEKFLSLLPRDTLQAAELARDHDERVREPA
                     FGVRVCRELRHAVEIRHPSFCTPSFAQMLRRQRVAWVIADTAGHFPYFEDITADFVYV
                     RLHGDEEL"
     gene            complement(674..1315)
                     /locus_tag="VLJ38_10875"
     CDS             complement(674..1315)
                     /locus_tag="VLJ38_10875"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HSU40067.1"
                     /translation="MPDPDRNPDLHGNVPDTSTLALVIVDVLNALDFPGGDAFLPRAL
                     QAAENIAALKARAARLGIPSIYVNDNGGRWRSDLRELLDACTREGVPGRPLGRLLRPL
                     PEDYVVLKPKHSGFYSTTLDTVLTYLGCKRLVLTGLTLERCLLFTANDAFLRDYSLHV
                     PRDCTAAIDAEDEAAALRILERVLGADTTTSTSIDLERLRDQAQAEAKGAGAA"
     gene            1475..2707
                     /locus_tag="VLJ38_10880"
     CDS             1475..2707
                     /locus_tag="VLJ38_10880"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40068.1"
                     /translation="MTVSEDDSRGHARSRQPKVLVVDDLPANLKLVEDVLEPLECQVV
                     LASSGRKALSLVERDEFAVLLLDVQMPEMNGYELAQQLRSDPKAAAVPIMFLTATSRD
                     DRNVLRGYGSGAVDFLFKPVDARILRSKVQVFLDLYASQRRLAEAYAELKATQVQLIQ
                     SAKMASLGELVAGIAHEINNPLAFALSHLETVKRSLGKAEGELDISVSPVARAEWDRA
                     TARLQEIGFGLDRIRELVLKLRVFSRLDEGEWKAVSIRESVESVLMILQHRLVSGISV
                     RTDFGTPDEIECYPSLLNQALLNVLANAIEALPATGTVTVQTGGTADAYEICIADTGP
                     GIAPLLMDRVFEPFFTTKPPGQGTGLGLSITYSIMQKHGGMLALDCPPEGGTKVRLTL
                     PIRRGPEFNGSGGKQLSS"
     gene            2755..3027
                     /locus_tag="VLJ38_10885"
     CDS             2755..3027
                     /locus_tag="VLJ38_10885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40069.1"
                     /translation="MIFLTAQGSSPVEFLLGRYEPPPADVGRWRDAGIEERTGLLREE
                     RLLLPGDDPNASRLVRQVRYRDPVTRVIARAEAEQRVPRRRVRVAR"
     gene            complement(3114..>3934)
                     /locus_tag="VLJ38_10890"
     CDS             complement(3114..>3934)
                     /locus_tag="VLJ38_10890"
                     /inference="COORDINATES: protein motif:HMM:NF015817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DbpA RNA binding domain-containing protein"
                     /protein_id="HSU40070.1"
                     /translation="PPMDADTYTHRSGRTGRAGRKGKSSIMVQPAGLPRLAVMLKRAR
                     VRYRLEPIPTAESIEAAQDETLLAELSSSLQTPAEEPAADAGATAPARAEELPDERAL
                     RLAARLVQAGDAERALALLLMRSRVAGRCPPRDVTPQTPASANKQRGPANFSRHAHPR
                     EPLPAHRRPLAPERKHAAERQHTREHAAPDAGWVRFRVSWGQAEGADARRLLPMLCRR
                     GKIRGSDIGAIELTPSFSFVDVSQRVALEFERATQRPDPRDPTVHVRRELDLRG"
BASE COUNT          655 a         1242 c         1371 g          666 t
ORIGIN      
        1 agctcttcgt cgccgtgcaa gcgcacataa acgaaatcgg ccgtgatgtc ctcgaagtag
       61 ggaaagtgcc ccgccgtatc ggcgatcacc cacgcgacgc gctggcggcg cagcatctgg
      121 gcgaagctcg gcgtgcaaaa gctcgggtgc cgaatttcga cggcgtgccg caattcgcgg
      181 cacacgcgca cgccgaaggc aggttcgcgg acgcgctcgt cgtggtcccg cgcgagctcc
      241 gcggcttgca gggtgtcgcg cggcaagagc gacagaaatt tctcgaagcg ttcgtcgagc
      301 tgtagcgtcg gcgggaattg ccagaggatg gggccgagct tctcctcgag acacaggggg
      361 ccggacgcga gaaagttggc gagcgcgcgt tcgacgttcc gcagccgcag catgtgcgtg
      421 atgaagcggc tgcctttgat cgcgaagacg aagtccggcg gcgtcgcctt gtaccactgt
      481 cgatagcagc tcgggttttg cagcgaatag aacgagccgt tgatctcgat cgtggaaaag
      541 tcgttcgcgg cgaaggcgag ctcatccgct tgcctgagcc ccttcgggta gtaaacgcca
      601 cgccagggtg cgtagcgcca gccggagatc ccgacgcgga tccgcgaaga cgcagtgccg
      661 aacggcaggc gcttcacgct gcccccgctc ctttcgcttc ggcctgcgct tgatcgcgca
      721 gccgctcgag atcgatactc gtggaagtcg tcgtgtccgc gccgagcacg cgctcgagga
      781 tccgcagcgc ggccgcttcg tcttcggcat cgatcgcggc ggtgcaatcg cgtggaacgt
      841 gaagcgagta gtcgcggaga aacgcgtcgt tcgccgtgaa caagagacaa cgttcgagcg
      901 tgagtcccgt gagcacgagc cgcttgcagc ccaagtacgt gagcacggtg tcgagcgtcg
      961 tcgagtaaaa gccggagtgc ttcggcttca acacgacgta atcttccggc agtggtcgca
     1021 gcagccggcc gagcgggcgc ccgggcacgc cctctcgggt acaggcgtcc aagagctcgc
     1081 gcagatcgga gcgccagcgt ccgccgttgt cgttgacgta aatgctcggg atcccgagac
     1141 gcgccgcgcg agccttgagc gcggcgatgt tttcggctgc ttgcaacgcg cgcggtagaa
     1201 acgcgtcgcc gccggggaaa tcgagcgcgt tcagtacatc gacgatcacg agtgcgagcg
     1261 tgctcgtgtc ggggacattc ccgtgcagat ctggattccg gtcgggatcg ggcatcgcga
     1321 atgcttggcg aggcaacatc cgtgccttga aggagcacga gcccgccggg cggtagggaa
     1381 gcggccaggc ccgtcggcga cgctccgcgg cgggcttgat gagccgagct cgaggcgact
     1441 acattacggc gcagggatcg aagggcggcg cacgatgacg gtgtccgaag acgattccag
     1501 gggtcatgcg cgctcacgac agccgaaggt gctcgtggtc gacgatctgc cggcgaatct
     1561 gaagctggtg gaggacgtcc tggagcccct ggagtgtcag gtcgtactcg ccagttccgg
     1621 tcgcaaagcc ttgagcctcg tcgaacgcga cgagtttgcc gtgctgctgc tcgacgtcca
     1681 aatgccagaa atgaatggct acgaacttgc gcagcagctg cgtagcgatc cgaaggccgc
     1741 ggcggttccc attatgttcc tgaccgcgac gagtcgcgac gaccgcaacg ttctccgcgg
     1801 ctacggctcg ggcgccgtcg attttctgtt caagcccgtg gacgcgagga tcctgcgtag
     1861 caaggttcaa gtctttctcg acctgtatgc cagtcaacgt cgcctcgcgg aggcgtatgc
     1921 cgagctcaaa gccactcagg ttcagctgat ccagtccgca aaaatggcgt ccttgggtga
     1981 gctcgtggcg gggatcgcgc acgaaatcaa taacccgctg gcgttcgcgc tctcccacct
     2041 cgagaccgtg aagcgaagcc tcggcaaggc ggagggtgaa ctcgatatca gcgtttctcc
     2101 cgtagcgcgc gccgagtggg atcgcgcgac ggcgcggctc caagaaatag ggttcggcct
     2161 cgaccgcatc cgagagctcg tgctgaaatt gcgagttttt tcccgcctgg acgaagggga
     2221 gtggaaagcg gtgagcattc gggaaagcgt cgagtccgtg ctcatgatcc ttcagcatcg
     2281 gctggtcagc ggcatcagcg tgcgaacgga tttcggaacg ccggacgaga tcgagtgtta
     2341 cccgagcctg ctgaaccagg cgctcctgaa cgtactggcg aacgcgattg aagcgctgcc
     2401 ggcgaccgga acggtgacgg ttcagactgg cgggaccgcc gacgcttacg agatctgcat
     2461 cgccgatacc ggtcccggga tcgcgccgct gctcatggac cgtgtgttcg agccattttt
     2521 cacgaccaag ccaccggggc aggggactgg gctcggccta tcgatcactt actccatcat
     2581 gcagaagcac ggcggaatgc tcgcgctcga ctgcccgccc gaggggggta ccaaagtgag
     2641 gttgacgctg cccatccgca ggggacctga gttcaatggc tcgggcggaa agcagctttc
     2701 tagctgactg cccccgtcgt cttctgcgcg ctcctcttct gggcagcggt gttcatgatc
     2761 ttcttgacgg ctcaaggtag ctcgcccgtc gagttcctcc tcggtcgcta cgagcccccg
     2821 ccagccgacg tgggccgctg gcgggacgcg ggtatcgagg aacggacggg actgctgcgt
     2881 gaagagcgcc tcttgctgcc cggcgacgat cccaatgcgt ctcgcctcgt gcgccaagtg
     2941 cgttaccggg acccggtgac gcgcgtcatc gcccgcgcgg aagccgagca acgcgtgccc
     3001 cggcgacggg tgcgcgtggc aaggtgacgg cccgacggcg caccgctcgt cgtgcaatcg
     3061 tcgagcgccg ccacgtgacg gtcgtcgtca gcgcgcggtc gggctcggcg cgatcatccg
     3121 cgcaagtcga gctcgcgccg tacgtgcacg gtcggatcgc gcggatcggg gcgctgcgtc
     3181 gcgcgctcga actcgagggc gacgcgctgg gagacgtcga cgaacgaaaa gctcggcgtg
     3241 agctcgatcg cgccgatgtc gctgccgcgg atctttccgc gccggcacag catcggcaaa
     3301 agacgccggg cgtccgcgcc ttccgcctgc ccccacgaga cccgaaagcg cacccagccg
     3361 gcgtcgggag ctgcgtgttc gcgcgtgtgc tggcgctcgg ccgcgtgctt gcgctcgggc
     3421 gccaggggcc ggcgatgtgc cggcagcggc tcgcgcgggt gcgcgtggcg cgaaaaattc
     3481 gccggtccgc gctgcttgtt ggcggacgcg ggggtctggg gcgtcacgtc gcgcggtggg
     3541 cagcgacccg ccacgcgcga gcgcatgagc agcaacgcga gcgctcgctc cgcgtcaccg
     3601 gcttggacca gccgcgccgc gaggcgaagg gcgcgctcgt ccgggagctc ttccgcgcga
     3661 gcgggagcgg tcgccccggc gtcggctgca ggctcttcag cgggcgtttg gagggagctc
     3721 gaaagctcgg cgaggagcgt ttcgtcctgc gcggcttcga tactttccgc cgtggggatg
     3781 ggctccaagc gatacctgac gcgcgcgcgc ttgagcatca cggcgaggcg cggtagcccc
     3841 gccggttgca ccatgatgga gctcttgccc ttgcggccgg cacgcccggt gcgtccgctc
     3901 cggtgcgtgt acgtatccgc gtccatcggc ggct
//
LOCUS       DATIML010000634         1762 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2725456, whole genome shotgun sequence.
ACCESSION   DATIML010000634 DATIML010000000
VERSION     DATIML010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2725456"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1363)
                     /locus_tag="VLJ38_10895"
     CDS             complement(<1..1363)
                     /locus_tag="VLJ38_10895"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF013400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009341 - beta-galactosidase complex
                     [Evidence IEA];
                     GO_function: GO:0004565 - beta-galactosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HSU40071.1"
                     /translation="MGDTADVLAPTSTKMICAVLAATLLGCSAKPASAPVVQSASIPN
                     AGLRQVPLGLCEDYPEETRSLEEVRRDFGVLKAAGVNVLRVSIGWDGVEPEKDHYDFA
                     FWDAFVDAAVASGIRLIPYVAYTPRWDSDGTPEAYWKTPPRDLAEFTEIMGLLAARYR
                     ARVGSWEIWNEPDNRDYWLGSAAEYASLLAAGSAAVRRANPRAEVVSGGLAGGVEFLR
                     EVFDEHGGAELVDVVNLHAYYETWNPNPLEALPQYLDDVSAIVKRHGGRQAIWLAEVG
                     YSNWRAPAAPPSAPYEHTLDYQAVMLVRTLALAYAHPAVSLVAWYELKDPRGSAPMIG
                     NDHNRHLGVTFADYAPKPAFAALAFTQSLFSRGFSDVDAQVRVSRQPSSAVELRAFVT
                     ARQSLVLVAWLKTAAPPGAEPRHEVVRVAAPYTRRGAARVYDAQGRPVEAHLGEYARS
                     SVDL"
BASE COUNT          301 a          621 c          556 g          284 t
ORIGIN      
        1 tcaaatcgac gctgctacgc gcgtattcgc cgaggtgcgc ctcgaccgga cgaccctggg
       61 cgtcgtaaac gcgcgccgcg ccgcgccgcg tgtagggggc agcgacccga acgacctcgt
      121 gccgcggctc ggccccgggc ggcgcggccg tcttgagcca cgcaacgagg acgaggctct
      181 ggcgcgccgt gacgaacgcc cggagctcga ccgcggagga cggctgacgg gacacacgca
      241 cctgagcgtc cacgtcgctg aaaccacgac tgaagagcga ctgcgtgaac gcgagcgccg
      301 caaacgccgg tttgggcgca tagtccgcga aagtcacgcc gaggtggcgg ttgtggtcgt
      361 tgccgatcat gggcgccgaa ccccgtggat ccttgagctc gtaccaggcc acgagcgaca
      421 cggccggatg cgcgtaagcg agcgctagcg tgcgcacgag catgaccgcc tgataatcga
      481 gcgtgtgctc gtacggcgca ctaggaggag cagccggcgc gcgccagttg ctgtagccga
      541 cctccgcgag ccaaatcgcc tgccgtccgc cgtgccgctt cacgatcgcg ctcacgtcgt
      601 cgaggtactg cggcagcgct tcgagcggat tcggattcca ggtctcgtag tacgcgtgca
      661 aattcacgac atcgacgagc tccgcgccgc cgtgctcgtc gaagacttcg cgcaagaact
      721 cgacaccgcc cgcgagtccg cccgagacca cttccgcacg cggattggca cgccgaaccg
      781 ccgctgaacc cgccgccagc aaggacgcgt actcggctgc gctgccgagc caataatcgc
      841 ggttgtccgg ttcgttccaa atctcccagg agcccacgcg cgcgcgataa cgcgccgcga
      901 gcagccccat gatctcggta aactctgcga gatcgcgtgg cggcgtcttc caatacgctt
      961 cgggcgtgcc gtccgaatcc cagcgcggcg tgtaggcgac gtacggaatc aggcgaatac
     1021 cgctcgctac cgccgcgtcg acgaacgcat cccaaaaagc gaagtcgtaa tggtccttct
     1081 cgggttcgac gccgtcccag ccgatcgaca cgcggagcac gttgacgccc gccgctttga
     1141 gcacgccgaa atcgcgccgc acctcctcga gtgagcgcgt ctcctccgga tagtcctcgc
     1201 agagcccgag cggcacctgc cgcagcccgg cgttcggtat cgaggcgctc tgaacgacgg
     1261 gcgcgctcgc cggcttcgcg ctgcagccga gcaacgtcgc cgcgagcacg gcgcaaatca
     1321 ttttcgtcga ggtcggcgcg agcacgtccg cagtatcgcc cacccccaga cacgaccaaa
     1381 cgacccgagc tcgcctcaga accgccatat tcgtttttag acctgccgca gctgagcgtg
     1441 ccggggcgca agcgcggagc gtgcggtcgt ggtattttgc cacgctcctt aacgccgcag
     1501 cgatagcgcc gttcttcgtg gcggctcgaa ccttcatgtc cgaaacgcac gttccgcgtc
     1561 ctctttggtc ttcgattcga aagctcgttc ctcattgccg tgctcaagcc ggcgacctcg
     1621 cccgtgtcgc agtgctcggt gggagcgcgg ccgcattggc agcgatcgag ccgctcacgc
     1681 tgaaggtgct cttcgatcgc ttcgtcgcca agcaagcggg agctgcggcg gcaccgttcg
     1741 cgcttttcgt cgccatcctc gc
//
LOCUS       DATIML010000635         6787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1573557, whole genome shotgun sequence.
ACCESSION   DATIML010000635 DATIML010000000
VERSION     DATIML010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6787
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1573557"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1200)
                     /gene="argH"
                     /locus_tag="VLJ38_10900"
     CDS             complement(<1..1200)
                     /gene="argH"
                     /locus_tag="VLJ38_10900"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HSU40072.1"
                     /translation="MTIARGGRLPNGLDAAMERLNTSVDVDGELWREDIRGSIAHARG
                     LARAGIISDAEAHAIVEGLGRVAGELERGELTFRRDREDVHMNVEARLVELIGAVGGK
                     LHTGRSRNDQVATDLRLYCRRLGEETLASMERLAGVLLARAEAEIDTLMPAYTHLQRA
                     QPSRLSHHLMAWQELVWRDHSRLTDALARANECPLGSGAVAGSGFPLDRAGVAAELGF
                     AAPTRNSIDATGSRDFLIEIASALALSAVHLSRIGEELVLWSTSEFGFVALSDGFSTS
                     SSMMPQKKNPDVAELVRGRAARAMGTLTSLLALEKSLAFGYGRDLQEDKRPIFDAFDC
                     VLPCLDALAGALASCRFDAGRMRQALEHGHLCATDLADFLALKGVPFREAHHVVGALV
                     REAEAQGI"
     gene            complement(1250..2206)
                     /locus_tag="VLJ38_10905"
     CDS             complement(1250..2206)
                     /locus_tag="VLJ38_10905"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HSU40073.1"
                     /translation="MALLTALPLTAARELGRAYGVELVELLPLSLGSVNSNFRAVAAD
                     GRVFFARLYEEQGPEGARGELELLHALARAGSKVAEPLARTGELPLYAGKPFALFPWL
                     EGEILCLARVSADACHRVGSALARVHRASDGLPRLGRGRFGPTDMLARLERVERETSR
                     AELLADVRRARELYERFVPARDASLPSGIVHGDLFRDNVLWQGGEILALLDFESAFHG
                     PFVYDLCVTIAAWCYRDAFDVAAARAMVEGYSAVRPLAAAERAAVPVEGALGCLRFVT
                     SRITDFELRAPPGAPPVRDFRRFLARLSAITSGALAPAFAAP"
     gene            complement(2273..2893)
                     /locus_tag="VLJ38_10910"
     CDS             complement(2273..2893)
                     /locus_tag="VLJ38_10910"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HSU40074.1"
                     /translation="MTLLDAAQKQRIEVAIAALEERTAAEVVVAVVPQSGRPWLTRSL
                     VAFACGLLGAWLFLEWAPVADARWALGFELAVTFAAFALFGARPLERLLIAPALAERE
                     VAEHAFALFARRGLHRTRGHTGVLILLSELERRAVILGDEGIHARLGEQGWRRHVDRI
                     VDAIRRGRAADGLVEVLGELTDVLAELAPPEAKNDNELPNAVLDER"
     gene            complement(2898..3716)
                     /locus_tag="VLJ38_10915"
     CDS             complement(2898..3716)
                     /locus_tag="VLJ38_10915"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HSU40075.1"
                     /translation="MKSKSLRDGLGALSGLFSALILLALLLVAGSAAALEPPALTGRV
                     NDYAHLLPADRARALTDRLAAHEQKTGHQFVVLTIPSLEGDPVEDFSIRTVEKWKLGH
                     AKVDDGLLLLVAQRERKVRIEVGYGLEGHITDALSSRIIRNTIVPAFRGGDYPGGIEQ
                     GVFELLRADGDDQGGAARTPSGARSPNSGSSLWPLLFFAPIVFLFLWLRGRSGGGYGT
                     GGRFGGGGYYGRGYRGGYWGGGGGFGGGGFGGGGGGGFSGGGGGFGGGGASGSW"
     gene            complement(3745..4305)
                     /locus_tag="VLJ38_10920"
     CDS             complement(3745..4305)
                     /locus_tag="VLJ38_10920"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HSU40076.1"
                     /translation="MLAVAVILPLGGCGYNEIIDRDEEVKAGWAEVQNQYQRRSDLVP
                     NLVNVVKGNAQFEKSTLESVVEARSKVAGVKVDQSTIDDPAKLKQFEEAQQGLTSALS
                     RLMVVVERYPDLKATESFRDLQSQLEGTENRITVARKRYIDSVAEYNKVVERFPTSIG
                     ASLRHKPLRPTFSVAPGVEKVPEVKF"
     gene            complement(4477..6291)
                     /gene="typA"
                     /locus_tag="VLJ38_10925"
     CDS             complement(4477..6291)
                     /gene="typA"
                     /locus_tag="VLJ38_10925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HSU40077.1"
                     /translation="MSHADGIRNVAIIAHVDHGKTTLVDAMLRQTGTYRQNEHVIDRV
                     MDSNDLERERGITILAKHCSARFRDVTINIIDTPGHADFGGEVERTLKMADGALLLVD
                     AAEGPLPQTRFVLGKAIELGLPVIVVVNKIDRSDARPDDVLTEVFDLFCELEASDAQT
                     DFPSLYAIGKAGIAKYKLEDEGKNLLPLLETIISRVPPPRGNPDEPLQLLVHNIEHDE
                     YVGRLGIGRVWRGKLSVGETVQLVGATGGQPARISALYGYEGPKRVKVERAEAGDIVA
                     VAGIEEVQIGDTLAATDRVEALPRIVVEEPTIKIRFVVNTSPFAGKVGKWVTSRHVRD
                     RLQREARKNLALRFEDTPEPDTFIVYGRGELMLAVLAETMRREGYEFALGMPEVVVKD
                     VDGVLSEPIERVSVDVPEQYVGSVTTRLGERRGKLVKMANLGFGRARIEFIVPSRGLI
                     GFRSAFLTETRGMGLLNSLFEGWEPYAGPMLRRPNGAMVADRRGVTTPYALFHLQPRG
                     VLLVGPGVEVYEGMIVGEHNRNNDLDVNVTREKKLTNIRAAGRDENVILSPPRVLTID
                     TALEFIDRDELAEVTPDAVRVRKQVLDCNRRPRRDDEN"
     gene            6458..>6787
                     /locus_tag="VLJ38_10930"
     CDS             6458..>6787
                     /locus_tag="VLJ38_10930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40078.1"
                     /translation="MLLSTGCAGSLAEARDAFEEGRLPAAAVELRALEPKFATFGHET
                     RARYALYRGLVELGLGNAAAADHWLFLAYSADRRDPRCFDDREHGALLSAWRATGRLP
                     GEPGQRFR"
BASE COUNT         1105 a         2364 c         2277 g         1041 t
ORIGIN      
        1 gatcccctgc gcttccgctt cacgcacgag cgcgccgacg acgtggtgcg cctcgcgaaa
       61 cggcacgccc ttcagcgcca aaaagtcggc cagatcggtc gcgcacaggt gaccgtgctc
      121 caaggcctgc cgcatgcgcc cggcgtcgaa gcgacagctc gcgagggcgc ctgcgagagc
      181 gtcgaggcag ggcagcacgc aatcgaacgc gtcgaagatc ggacgcttgt cttcttgcaa
      241 gtcgcgcccg tagccgaagg cgaggctctt ttcgagcgcg agcaggctcg tgagcgtgcc
      301 catcgcgcgc gccgctcgcc cgcgcacgag ctcggcgacg tccgggttct tcttctgtgg
      361 catcatggac gagctcgtcg agaagccgtc gctcagcgcg acgaagccga actcggacgt
      421 ggaccagagc acgagctcct cgccgatgcg cgacaggtgc acggccgaga gcgcgagggc
      481 cgaggcgatt tcgatcaaga aatcacggct gcccgtggcg tcgatggagt tgcgcgtcgg
      541 ggccgcgaag ccgagctcgg ctgcgacgcc cgcgcgatcg agcggaaagc cgctgcccgc
      601 gaccgcgccg ctgccgagcg gacactcgtt ggcgcgcgcg agcgcgtcgg tgagccggga
      661 gtggtcccgc cagacgagct cttgccaagc catcaggtga tgtgaaagcc ggctcggctg
      721 cgcgcgttgc aagtgcgtgt aggccggcat cagcgtgtcg atctcggcct cggcgcgcgc
      781 gagcaagacc cctgccaggc gttccatcga ggcgagcgtc tcctcaccga gccggcggca
      841 gtacaggcgc aaatcagtcg cgacttggtc gttgcgcgag cggccggtgt ggagcttgcc
      901 gcccacggcg ccgatgagct cgacgaggcg ggcctcgacg ttcatgtgca cgtcctcgcg
      961 atcgcgccgg aacgtgagct cgccgcgctc gagctccccc gccacgcgcc cgagtccttc
     1021 gacgatcgcg tgcgcttcgg cgtcgctgat gatgccggcc ctggcgagcc ctcgcgcgtg
     1081 cgcgatcgag ccgcggatgt cctcgcgcca gagctcaccg tcgacgtcga cgctggtgtt
     1141 gagccgctcc atcgcggcat cgagtccgtt cgggaggcga cctccacgtg caatcgtcat
     1201 gacgcgcccg aagctaacac gccgtgccgc acgcttcccg ccacgcgcgt cacggcgccg
     1261 cgaacgcggg cgcgagcgcg ccgctcgtga tggcgctcag gcgggcgaga aagcgccgaa
     1321 aatcacgcac cggcggcgcg cccggcggcg cgcgcagctc gaaatccgtg atgcgcgacg
     1381 tgacgaaccg caagcaaccg agcgcgccct cgacgggaac cgccgcgcgc tccgctgccg
     1441 cgagcggccg cacggcgcta tacccctcca ccatggcgcg cgccgccgcc acgtcgaagg
     1501 cgtcgcggta gcaccaggcg gcaatcgtca cacacaggtc gtagacgaaa gggccatgaa
     1561 acgcgctctc gaagtcgagc agcgccagga tttccccgcc ctgccacagc acgttgtcgc
     1621 gaaacaggtc gccatgcacg ataccggacg gcaagctcgc gtcgcgcgcc ggtacgaagc
     1681 gttcgtagag ctcgcgagcg cgacgcacgt cggccaagag ctcagcgcgg ctggtctccc
     1741 gctccacccg ttcgagccga gcgagcatgt ccgtcggccc gaaacggccc cggcctagcc
     1801 gagggagtcc gtcgctcgcc cggtgaacgc gcgcgagcgc cgaaccaacc cggtggcacg
     1861 cgtcggcgct gacgcgcgcg agacacagga tttcgccttc gagccacggg aacagcgcga
     1921 acggcttgcc cgcgtagagc ggcagctcgc ccgtgcgcgc gagcggctcc gccaccttcg
     1981 accccgctcg agcaagcgcg tgaaggagct cgagctcacc acgggcgccc tccggcccct
     2041 gctcctcgta caaacgcgcg aaaaagacac ggccgtcggc agcgaccgcg cgaaagttcg
     2101 agttcaccga gccgagcgag agcggtaaga gctcgacgag ctcgacgccg taagcgcgac
     2161 cgagctcgcg cgcggcggtg agcggcagtg cagtcaaaag ggccacgacg cgcgaggatc
     2221 acccagcgct catgcagcgg tcaagcgccg gcgccctggg cgtcggcccg agctagcgct
     2281 cgtcgagcac ggcgttcggc agctcgttgt cgtttttcgc ttcgggcggc gcgagctcgg
     2341 cgagcacgtc ggtcagctcc ccgagcacct cgacgagccc gtccgcggct cgcccgcgcc
     2401 gaatggcgtc tacgatacga tcgacgtgcc gccgccagcc ctgctcgccg agccgcgcgt
     2461 gaatcccctc gtcaccgagg atcacggcgc gccgctcgag ctcggagagc aggatgagca
     2521 cgcccgtgtg cccgcgggtg cgatgtagtc cgcggcgcgc aaagagcgcg aaagcgtgct
     2581 ctgcgacctc gcgctccgcg agtgccggag cgatgagcag ccgttcgagc ggccgggcgc
     2641 cgaacagcgc gaaggccgca aaggtgaccg cgagctcgaa accgagcgcc cagcgcgcgt
     2701 cggcgaccgg agcccattcg aggaaaagcc acgcgcccag cagtccgcac gcaaaggcga
     2761 ccagcgagcg cgtgagccag ggtcgcccgc tctgcggcac gacggcgacg acgacctcgg
     2821 cagcggtacg ctcttcgagc gctgcaatcg cgacttcgat gcgctgcttc tgcgcggcgt
     2881 cgagcagcgt catcgcatca ccatgacccc gacgcgccgc cgccgccgaa cccgccgccg
     2941 ccaccggaaa agccgccgcc accgccgcct ccaaagccac cgccgccgaa gccgccacct
     3001 ccaccccaat aaccgccgcg atacccgcgt ccgtaatagc cgccgccgcc gaagcgcccg
     3061 cccgtcccgt agccgccccc gcttctaccg cggagccata gaaacaaaaa cacgatcgga
     3121 gcgaagaaca gcagcggcca gagcgaagaa ccggagttcg gcgagcgcgc accgctcggc
     3181 gtgcgcgccg cgccgccctg gtcgtcccca tcggcacgca acagttcgaa gactccctgc
     3241 tcgatgccgc ccggatagtc gccgccccgg aacgccggca cgatggtgtt gcggatgatg
     3301 cgcgacgata gggcgtcggt gatgtgccct tcgagtccgt atccgacctc gatgcgcacc
     3361 ttgcgttcgc gctgggcgac cagcagcaag agtccgtcgt cgaccttggc gtgaccgagc
     3421 ttccacttct cgaccgtgcg gatcgaaaaa tcctcgaccg gatcgccctc gagcgacggg
     3481 atcgtgagca cgacgaactg atggccggtc ttttgctcgt gggccgccag acggtccgtg
     3541 agcgcgcggg ccctatccgc gggcaaaagg tgggcgtagt cgttgacgcg acccgtgagc
     3601 gccggcggct cgagcgcggc tgcgctgcct gccacgagca acagcgcgag caggatcagg
     3661 gccgagaaca gcccggagag cgcgccgagc ccgtcgcgaa gcgacttcga cttcatgctg
     3721 cagctcctca cgtgaagcgc tgactcagaa cttcacttcc ggcactttct cgacgccggg
     3781 cgcgaccgag aacgtcggcc gcagcggctt gtgacgcagg ctcgcgccga tgctcgtcgg
     3841 gaaacgctcg accaccttgt tgtactcggc cacggagtcg atgtagcgct tgcgcgcgac
     3901 ggtaatgcga ttctcggtgc cctcgagctg cgactgcaga tcgcggaacg actcggtcgc
     3961 tttgagatcc gggtagcgct cgacgacgac catcagccgc gagagcgcgc tcgtgagccc
     4021 ctgctgcgct tcttcgaatt gcttgagctt ggccgggtcg tcgatggtcg actggtcgac
     4081 cttgacgccc gccaccttgg agcgcgcctc gacgacgctc tctagcgtgc tcttctcgaa
     4141 ttgggcgttg cctttgacga cgttgaccag gttcggcacg agatcggagc ggcgctgata
     4201 ctgattttgg acctcggccc accccgcctt cacttcctcg tcacggtcga tgatctcgtt
     4261 gtagccgcag ccgccgagcg gcaggatcac ggccaccgcc agcatcaaca cggaaaaagg
     4321 ccgaagcgac gctcggctga gccttcggac caactccgaa acgagagaat gcttcatgaa
     4381 ttcggcgctc cgcccagttg gttaagaccg gagcggcacg ggcgcaagcg ccgaaagccg
     4441 cgtactagcc tcgactcgag cgttcgagcc agaacctcag ttttcgtcgt cgcggcgcgg
     4501 acggcgattg caatcgagca cctgtttgcg cacgcgcacg gcgtcgggcg tgacctcggc
     4561 gagctcgtcg cgatcgatga actcgagtgc ggtgtcgatc gtgagcacgc gcggcggcga
     4621 gaggatcacg ttttcgtcgc ggcccgcggc gcgaatgttg gtgagcttct tctcgcgcgt
     4681 gacgttcacg tcgagatcgt tgttgcggtt gtgctcgcct acgatcatac cctcgtacac
     4741 ctcgacgccc ggcccgacga ggagcacccc gcgcggctgc aagtgaaaga gcgcgtaggg
     4801 cgtcgtcacg cccctgcggt cggcgaccat cgcgccgttc gggcggcgaa gcatggggcc
     4861 ggcgtagggc tcccaacctt cgaacagcga gttcagaagt cccatgccgc gtgtctcggt
     4921 gaggaaggcc gagcggaagc cgatgagacc gcgtgaaggc acgatgaact cgatgcgggc
     4981 gcgaccgaag ccgaggttcg ccatcttcac gagcttgccg cgccgttcgc cgaggcgcgt
     5041 ggtgaccgag ccgacgtact gctccggcac gtcgacgctc acgcgttcga tcggctcgga
     5101 caagacgccg tccacgtcct tcacgacgac ctcgggcatc ccgagcgcaa actcgtagcc
     5161 ctcgcgccgc atcgtctcgg cgagcacggc gagcatgagc tcgccgcggc cgtacacgat
     5221 gaacgtgtcc ggttcaggcg tgtcctcgaa gcggagcgcg aggtttttgc gagcttcgcg
     5281 ctgcaggcgg tcgcgcacgt gccgcgaggt cacccatttg ccgactttac cggcgaacgg
     5341 cgaggtgttg acgacgaagc ggatcttgat ggtcggctct tcgaccacga tgcgcggcag
     5401 cgcctccacg cgatcggtcg ccgcgagcgt gtcgccaatt tgcacctctt cgatgcccgc
     5461 gactgcgacg atgtcgcccg cctcggcgcg ctcgaccttg acgcgcttgg gaccctcgta
     5521 gccgtagagc gcgctgatgc gcgccggttg cccacccgtg gcccccacga gctgcacggt
     5581 ttcgccgacg ctcagcttgc cgcgccacac gcgaccgatg ccgagccggc cgacgtactc
     5641 gtcgtgctcg atattgtgca cgagcagctg cagcggctcg tccgggttgc cgcgcggcgg
     5701 cggcacgcgc gagatgatgg tctcgagcag cggcagcagg ttcttgccct cgtcctcgag
     5761 cttgtacttg gcgatgcccg ccttgccgat cgcgtacagg ctcggaaaat ccgtctgcgc
     5821 gtcgctcgcc tcgagctcgc agaacagatc gaacacctcg gtgagcacgt cgtccggtcg
     5881 cgcgtcggag cgatcgattt tgttgacgac gacgatgacc ggcagcccga gctcgatcgc
     5941 cttgccgagc acgaaacgcg tctgcggcag cggcccctcg gcggcgtcga ccaggagcag
     6001 cgctccgtcc gccatcttga gcgtgcgctc gacctcgccg ccgaagtcgg cgtgcccagg
     6061 agtgtcgatg atgttgatcg tcacgtcgcg aaagcgcgcg ctgcagtgct tggccaaaat
     6121 ggtgatcccg cgctcgcgct cgagatcgtt ggagtccatc acgcggtcga tgacgtgctc
     6181 gttttggcga tacgtgccgg tttggcgcag catggcgtcc actagcgtgg tcttgccgtg
     6241 atcgacgtgt gcgatgatgg caacgttgcg gatgccgtcg gcgtggctca tggggcgccc
     6301 cctctagcat cagttcttcg cgcgagccgg aaggaagtgc ggctcggccc gttccggcgt
     6361 ttctcgtgcg agcggatccg gcggttttca agcaactcga gcgctctcgg accgatcttc
     6421 acgggtgcgt tcccgttcgg ccctttttct caatttggtg ctcctgagca ctggctgtgc
     6481 tgggtccctg gcggaagcgc gcgatgcttt cgaagagggg cggctgccgg cggccgcggt
     6541 cgagctccgc gcgctcgagc cgaaatttgc gaccttcggc cacgaaacac gggcgcgcta
     6601 cgcactctac cgggggctcg tggagctcgg gctcggcaat gcggcggccg ctgaccactg
     6661 gcttttcttg gcctacagcg cggatcgacg cgacccgcgg tgcttcgacg accgcgagca
     6721 cggcgctctg ctctcggcgt ggcgcgcgac ggggcgcttg ccgggcgagc cgggccagag
     6781 gttcaga
//
LOCUS       DATIML010000636         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2436521, whole genome shotgun sequence.
ACCESSION   DATIML010000636 DATIML010000000
VERSION     DATIML010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2436521"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VLJ38_10935"
     CDS             complement(<1..491)
                     /locus_tag="VLJ38_10935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40079.1"
                     /translation="MLGRSVQFLEQDCCVNVRGRAVVFGDALVDDVPDKGMHERKWRL
                     RPKKVGSGEGGGSRCDIAPFEPGERGCVVSARAVTEHRDSARERGSGVRKPSKSKANR
                     PCHCVRRQPLNHGDAGCDRRDILGGETPQKLAEEQRVSTRRAVTCRDERLVRVSAQLG
                     AHK"
     gene            507..>1831
                     /locus_tag="VLJ38_10940"
     CDS             507..>1831
                     /locus_tag="VLJ38_10940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40080.1"
                     /translation="MLAPPESVAAAVGVLRGAAERAAGEAGLESAVRYLIRALDEVMD
                     DEERSALLLELAAAEARLGRPEVIEHLREAAALAQTDEQRGEVALALGHALYWAGDEE
                     DGVEVVEQALGELTEIDNDLRRRLEAELMVNAMRLASAHEDARRRVASLDVAPSEGSG
                     ARLLLSGQAYAIGTSGVGTRAEAISIAQETLAAMPLDELAWNYTAGIYALMWGDALDE
                     ALAFLDGALSEVRRRGAVLQFSSLSMTRALIQYTRGALLDAEADGRAALETMPHKHVW
                     FVPHSHGWLAQILVERGAVDEAAEVIARVPEPPDPFSRTPVHRARALIAAARGDHRSA
                     LDQALRLGEALAGFGHVSAAASYPAWRSLAALAHHALGAEDEALALASEEAELARAWG
                     APRTLGRALRILGLIEGGADGITTLREAVDTLADSPSRLEHAYALANLGA"
BASE COUNT          277 a          638 c          627 g          289 t
ORIGIN      
        1 tgcttgtgcg cgccgagctg ggcgctgacg cggacgaggc gttcgtcgcg gcatgtcaca
       61 gcgcgacggg tggaaacccg ctgctcctcc gcgagcttct gcggagtctc gccgccgagg
      121 atgtcgcgcc ggtcgcagcc agcgtcgccg tggttgagcg gttggcgccg gacacagtga
      181 cacggtcggt tcgctttcga cttgctcggc ttccggacgc cgctgccgcg ctcgcgcgcg
      241 ctgtcgcggt gctcggtgac cgcgcgagcc gagaccacgc agccgcgctc gccgggctcg
      301 aacggcgcga tgtcgcaccg gctgccgccg ccctcgcccg agccgacctt ctttggccgg
      361 agcctccatt ttcgttcgtg catccccttg tccggaacgt cgtctaccag agcatccccg
      421 aacacgaccg ctcgaccgcg cacgttgacg cagcagtctt gctccaagaa ttgaacgctc
      481 cggccgagca agtcgcagcg cagctcttgc tcgcgccgcc agagtccgtt gcggccgctg
      541 tcggagttct gcgaggggcg gctgaacgcg ctgctggcga ggccgggctc gaaagtgccg
      601 tcagatattt gatccgggcg cttgatgaag taatggacga cgaggagcgg agcgcactgt
      661 tgctcgaact ggctgcggca gaggctcgcc tcggccgacc cgaggtgatc gagcacctcc
      721 gcgaggccgc ggcgctcgct caaaccgacg aacagcgtgg cgaggtcgcg ctcgcactcg
      781 gccacgccct ctattgggcg ggcgacgagg aagacggcgt cgaggtcgtc gaacaagcgc
      841 tcggcgagct gaccgagatc gacaacgatc tgcgccgccg gctagaggcc gaactgatgg
      901 tcaatgcgat gcggctcgcg tcggcgcacg aagatgcccg gcggcgagtc gcatcgctcg
      961 atgtcgcgcc gagcgagggc tctggcgccc ggctactgct cagcggccag gcttacgcca
     1021 tcggcaccag tggggttggc acccgcgccg aggccatctc gatcgcacag gagacgctcg
     1081 cggcgatgcc tctggacgag ctggcctgga actacacggc cgggatctac gcgctgatgt
     1141 ggggcgacgc cctcgacgag gcgcttgctt tcctcgacgg cgccctgagc gaggtgcggc
     1201 gacgcggggc agtgctgcag ttttcgagcc tttcgatgac tcgggctctg atccagtaca
     1261 cgcgcggcgc gctgctcgac gcggaagctg acggccgcgc cgcgctcgaa acgatgccgc
     1321 acaagcatgt gtggttcgtt cctcactcac acggctggct cgcacagatt ctcgtcgaac
     1381 ggggcgcagt cgatgaggca gccgaggtca ttgcccgcgt ccccgagccg cccgacccct
     1441 tctcccgcac gccggttcac cgtgcgcgcg cgctgatcgc ggccgcgcgc ggcgaccacc
     1501 gaagcgcgct cgatcaagca cttcgactcg gcgaggcact cgcgggattc ggtcacgtca
     1561 gcgcggctgc ctcataccca gcctggcgct cgctcgcagc tctcgctcat cacgccctcg
     1621 gggcagagga tgaagcgctc gcccttgcga gcgaagaagc tgaacttgca cgggcttggg
     1681 gtgcgccgag gacactcggc cgggcgctgc ggatccttgg gctgatcgaa ggcggcgccg
     1741 acggcatcac gacgctccgc gaagccgtcg acacgctggc ggactcgcca tcacggctcg
     1801 aacacgccta cgcactcgcc aacctcggcg c
//
LOCUS       DATIML010000637         1816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4170015, whole genome shotgun sequence.
ACCESSION   DATIML010000637 DATIML010000000
VERSION     DATIML010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4170015"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..795)
                     /locus_tag="VLJ38_10945"
     CDS             complement(172..795)
                     /locus_tag="VLJ38_10945"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSU40081.1"
                     /translation="MARPRTDIEPRILAAARQSFRERGVEAASLRAIARDAGTSIGMI
                     YYYYPTKDELFFAVVEETYQKLLADLERLLSPEASVDERLRRLFERVAQVSDEEVFIL
                     RLVAQEGLLQSPRFERLVERFLRGHVPLVLKTVFDGIREGTLDAKRHPVVLLLATFGL
                     AGPPQLIRRALGSRLPVPGAPEGTVLARELVDVLLHGIAPARKAENA"
     gene            complement(795..>1816)
                     /locus_tag="VLJ38_10950"
     CDS             complement(795..>1816)
                     /locus_tag="VLJ38_10950"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU40082.1"
                     /translation="LFGYAINTDVRHMRTLVYDQDQSAASRDFAASMVATGFYDVVGH
                     VSGYAEIERSLRRGDARVALVVPPRYEANLRAGKPASLGLIVDGSDPQTVASATNTAS
                     AMAAARSSELLLERVKQSGAAGLEPVELEPNTWYNPELRTAVYIVPGLVGVILTMTMV
                     MLTAMAVARERERGTLEQLIVSPVRPVELVLGKIAPYVIIGYVQMTVILGAGQVIFHV
                     PFQGSLLLLYALAFVFIAANLAIGLFFSTLARTQQQAMQMSFFFLLPNILLSGFMFPF
                     EGIPRPAQIPALALPLTHFLRIVRSIVLKGGGFDDVYPEFLWLTGILCVLVLMSSLRF
                     RKKLI"
BASE COUNT          342 a          572 c          634 g          268 t
ORIGIN      
        1 tgatctcgag atcgtcggcg tgggcgccga caccgaggtg cgtcgtgcgg gcgagcgcgt
       61 cgctcggagc catgccgtcg ggcacgaaga tcgcggagct cggacgcgcg aacatgccgc
      121 tcaaattacc acggcgtgaa ggcgccgagc gctgcggtaa ggtcgactca tctacgcatt
      181 ttcggctttg cgggccggcg caatgccgtg gaggagcacg tcgaccagct cgcgagcgag
      241 cacggtgccc tcgggcgcgc cggggacggg cagccgcgag ccgagcgcgc ggcggatgag
      301 ctgcggcggg ccggcgagac cgaacgtcgc gagcaggagc acgaccgggt gccgtttcgc
      361 gtcgagcgta ccctcgcgaa tcccgtcgaa caccgtcttc agcacgagcg gcacgtgccc
      421 gcgcaagaag cgctcgacga gccgttcgaa gcgcggcgat tggagcaagc cttcttgcgc
      481 gacgagccgc aagatgaaga cttcctcgtc gctgacttgc gcgacgcgct cgaagagccg
      541 tcggagccgc tcgtccacgg aagcctccgg ggacagcaag cgctcgagat cggcgagaag
      601 cttctggtac gtctcttcga ccacggcgaa gaagagctcg tctttcgtcg ggtaatagta
      661 atagatcatg ccgatgctcg tgccggcgtc gcgagcgatc gcgcgcaggc tcgcggcctc
      721 gacgccacgc tcgcggaagc tctggcgcgc cgccgcgaga atgcgcggtt cgatgtcggt
      781 gcggggacga gccatcagat gagctttttc cgaaatctca gcgagctcat gagcacgagc
      841 acgcacagga tgcccgtgag ccacaaaaac tcggggtaca cgtcgtcgaa gccgccgccc
      901 ttgagcacga tgctgcgcac gatgcgcaag aaatgggtga gcggcagcgc cagcgcgggg
      961 atttgcgcgg gccgcgggat gccctcgaac gggaacatga agcccgagag caggatgttc
     1021 ggcaagagga agaagaacga catctgcatc gcctgctgtt gcgtgcgcgc gagcgtcgaa
     1081 aagaagagcc caatcgcgag attggccgcg atgaacacga acgcgagcgc ataaagcagc
     1141 aagagcgagc cctggaacgg cacgtggaag atcacctgtc ccgcgccgag gatcaccgtc
     1201 atttgcacgt agccgatgat cacgtacggc gcgattttac cgagcacgag ctcgaccggg
     1261 cgcacgggcg agacgatgag ctgttcgagc gtaccgcgct ctcgttcgcg cgcgaccgcc
     1321 atggcggtga gcatcaccat cgtcatggtg aggatcacgc cgacgagacc gggcacgatg
     1381 tagacggccg tgcgaagctc ggggttatac caagtgttcg gctcgagctc gacgggctcg
     1441 aggccggccg caccgctctg tttgacacgc tcgagcagga gctcgctcga gcgcgcggcc
     1501 gccatcgccg atgcggtgtt cgtcgcgctc gcgacggtct gcggatcgga gccgtctacg
     1561 atgagcccga gcgacgcagg cttaccggcg cgcagattcg cttcgtagcg cggcggcacg
     1621 acgagggcga cgcgcgcgtc cccgcgccgg agcgagcgct cgatttcggc gtagccgctc
     1681 acgtgcccga ccacgtcata gaagccggtc gccaccatgc tggcggcaaa atcgcgggac
     1741 gccgcgctct gatcctggtc gtacacgagc gtccgcatgt gccgcacgtc ggtgttgatc
     1801 gcgtagccga agagca
//
LOCUS       DATIML010000638         3140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2149160, whole genome shotgun sequence.
ACCESSION   DATIML010000638 DATIML010000000
VERSION     DATIML010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2149160"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..716)
                     /locus_tag="VLJ38_10955"
     CDS             complement(69..716)
                     /locus_tag="VLJ38_10955"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HSU40083.1"
                     /translation="MNPTRVGHGVLALALLAGCASAPDEADRSHSIVITKFAPNTDFA
                     KYKTYYLRPEIRTVSDEGELTPVSPSKAQPFLNATEQNLMARGFTPASKANADLGIEL
                     LYTEHVSTTYWCYSWWDPYYWGYPPYWGYYPYYGCDAAMWESNMLATSITDLSQGPSL
                     PGAGGEAGSGGMDPAQERVAGVWFSGVYGVLLDTPSAVDGINQAFTQSPYLKAAP"
     gene            975..1817
                     /locus_tag="VLJ38_10960"
     CDS             975..1817
                     /locus_tag="VLJ38_10960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40084.1"
                     /translation="MPDAPGSFLLDTPWQYESTTVATNGDESVPFPTDRAFLATVHYP
                     ASGEPATGDALDGSLVRFGADSRILVEPPSLTEYRDLGSRYSVVDSSALRVKVDHDGF
                     FSWGYHYDRPSGTLLLNPEPDASQAVLAFVCDVLTTVLVDGALDSAAAAVADALSTDP
                     RVASASSSELAALTALDPAVAAEWLLDVLSPGGILDPNVAGDVLAARLGPVVQALASV
                     ERDALTDTLVSALLDANVVAPTLSSERAEKALRFVLYRKVLLTTRNLAAVERIELELE
                     RGGS"
     gene            1814..2824
                     /locus_tag="VLJ38_10965"
     CDS             1814..2824
                     /locus_tag="VLJ38_10965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40085.1"
                     /translation="MSVGRQAPKKPRTAAALAFVAALFVTQLASAQAPDAGHGTSAWP
                     YKFPIWGNKLAERGIRFPLPFGIGLNYAFADQPITISNIAVGVNDGPMTDLSKIIKFG
                     DLNSRVNALNLRADLWVFPFVNVYGMANYIVESKTDVSVVEPFAFDAGAVQSGVGGGF
                     GTTFSGGALGLFGTLDLNWTWNKMQKLDKPVGTFLLAPRIGKNFGNWGGLEWILWVGG
                     MRQNIQSETKGEIRLSDAVGGSGFQEKLQGWYDGLPPGRQAVVDGIVGRINGGGDPVI
                     RYSLDKAIKYPWNMLIGGELGLTKAWRVRAEVGFIHRTQVVLGLNYRFGLFEAGPAAP
                     AK"
     gene            2878..>3140
                     /locus_tag="VLJ38_10970"
     CDS             2878..>3140
                     /locus_tag="VLJ38_10970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40086.1"
                     /translation="MLRLVLGGSVALGLCTSVPASAEPSTSQSSAAPDEPTSRMRLRF
                     VLPLWLPLLTFEGSTQSKGTLSDLVQTETAVRWVAMGMLELGYR"
BASE COUNT          510 a         1073 c          990 g          567 t
ORIGIN      
        1 ggtcgaaatc agtgcgatgc ccgaggctcc ggctagcgtc ttcttcatgc gactctcccg
       61 aaaggtcttc acggtgccgc cttcaggtag ggggattgcg taaacgcctg attgatcccg
      121 tcgaccgcgc tcggcgtgtc gagcaaaacg ccgtaaacgc cggagaacca gacacctgcc
      181 acgcgctcct gcgcgggatc catgccgccc gaaccggctt cgccgcccgc gccgggcagg
      241 ctcgggcctt ggctcaaatc cgtgatcgac gtagcgagca tgttcgactc ccacatcgcg
      301 gcgtcacagc cgtagtacgg gtagtagccc cagtacggcg gataacccca gtagtaggga
      361 tcccaccacg aatagcacca gtaggtcgtc gagacgtgct cggtataaag tagctcgata
      421 ccgagatcgg cgttcgcctt gctcgcgggt gtgaagccgc gcgccatgag gttctgctcc
      481 gtagcgttga ggaacggctg cgctttgctc gggctcaccg gcgtgagctc gccttcgtcc
      541 gagaccgtgc gaatctccgg ccgcaagtag tacgtcttgt acttggcgaa gtccgtattc
      601 ggcgcaaact tcgtgatcac gatcgagtgc gaccggtcgg cctcgtcggg cgccgaggcg
      661 cagccggcga ggagcgcgag cgccagcacc ccgtgcccta ctcgtgtcgg gttcatggcc
      721 tccccttagg catggccccc gcacaccgtc aaacgcttcg ctactccaac tctcggaggc
      781 tcgcggtcgg cggcttcttc gtagcgttcg gttgcgtctc ggattcggaa tgtgcactat
      841 cgcggcccgg cacctcgatg cggacgcaag gccgatgcac gctccggcgc cccagggcgc
      901 gctgtcttcc actttgcctg atttttccgc tcgctgtggc cctgggggcc tgcgcggaag
      961 agacgcatcc gcccgtgcct gacgctccag gctcgttcct gctcgacacc ccgtggcaat
     1021 acgaaagcac gacggtcgcg accaacggtg acgaatcggt gcccttcccg acggaccgcg
     1081 ccttcctcgc gaccgtccac taccccgcca gcggcgaacc tgcgacgggc gacgcgctcg
     1141 acggctcgct cgtccgcttc ggcgccgaca gccggatcct ggtcgagcca ccgagcctca
     1201 ccgaatatcg cgacctcggc tcgcgctact cggtggtgga ttcgagcgcc ttgcgcgtga
     1261 aggtcgacca cgacggcttt ttttcctggg gctaccacta cgaccgaccc tcgggcaccc
     1321 tgctgctcaa tccggagccc gacgctagcc aagccgtgct ggccttcgtg tgcgacgtgc
     1381 tcacgacggt tctcgtcgac ggagcgctcg acagcgctgc ggccgccgtc gccgacgcgc
     1441 tgtccaccga tccccgcgtg gcttcggcga gctcgtccga gctcgccgcc cttaccgcgc
     1501 tcgatccggc ggtcgcggcg gagtggctgc tcgatgtcct ctcgccgggc ggcatcctcg
     1561 accccaacgt tgcgggagac gtgctcgccg cgcgcctcgg ccccgtcgtg caggcgctcg
     1621 cgtccgtcga acgcgacgcg ctcaccgaca cgctcgtctc ggcgctgctc gacgcgaacg
     1681 tcgtcgctcc caccctcagc tcggaacgcg ccgagaaagc gcttagattc gtgctctatc
     1741 gcaaggtcct tttgacgact cgaaatctcg cggccgtcga acgcatcgag ctcgagctcg
     1801 agcggggtgg ctcgtgagcg tcggcaggca agcacccaaa aagcctcgga ccgccgcggc
     1861 gctcgcgttc gtcgcggctc tgttcgtgac gcagctggcg agcgcccaag cccccgacgc
     1921 cgggcacggt acgagcgctt ggccgtacaa gttcccgatc tggggcaaca agctcgcgga
     1981 acgcggcatt cgctttccgc tgccgttcgg catcgggctc aactacgcgt tcgccgatca
     2041 acccatcacg atttccaaca tcgccgtcgg cgtgaacgac ggcccgatga ccgatctctc
     2101 caagatcatc aagttcggcg acttgaactc gcgcgtcaac gcgctgaact tgcgcgccga
     2161 tctctgggtt tttcccttcg tcaacgtcta cgggatggcg aactacatcg tggagtcgaa
     2221 gaccgacgtt tccgtggtgg aacccttcgc tttcgacgcg ggcgccgtgc agtccggcgt
     2281 gggcggcggg ttcggcacga ccttttcggg cggtgcattg ggcttgttcg gcacgctcga
     2341 tctcaactgg acgtggaaca agatgcagaa gctcgacaag ccagtcggca ccttcttgct
     2401 cgcgccgcgc atcggcaaaa acttcggcaa ctggggcggg ctcgagtgga ttttgtgggt
     2461 cggaggcatg cgccagaaca tccaatccga gacgaagggt gaaatcaggc tcagcgatgc
     2521 cgtgggcggc agcggctttc aggaaaagct ccagggttgg tacgacggct tgccgcccgg
     2581 aaggcaggcg gtcgtcgacg gcatcgtcgg acgcatcaac ggcggcggcg atcccgtgat
     2641 tcgatacagt ctcgacaaag ccatcaaata tccgtggaac atgctgatcg gaggcgagct
     2701 cggcctcacc aaagcctggc gcgtccgcgc cgaggtcggc ttcattcacc gcacccaggt
     2761 cgtcctcggg ctgaattacc gcttcggatt attcgaagct ggacccgccg ctccggcgaa
     2821 gtgaaccgcg aggcacaggg gggcgtcatg gttcggcgtg gggcactccg gacagcgttg
     2881 cttcgcctcg tactcggcgg gagcgtcgcg ctcggcctct gcacgagcgt ccccgcgagc
     2941 gcggagccga gcacgagtca gagcagcgcc gcgcccgacg aacccacgag ccgaatgcgc
     3001 ctgcgtttcg tgttgcccct gtggcttccg ctgctgacct tcgaaggctc gacgcagtcg
     3061 aagggcacgc tctccgacct cgttcaaacc gaaaccgccg tacgctgggt ggcgatgggc
     3121 atgctcgagc tcggctatcg
//
LOCUS       DATIML010000639         2055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2437399, whole genome shotgun sequence.
ACCESSION   DATIML010000639 DATIML010000000
VERSION     DATIML010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2437399"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..796
                     /locus_tag="VLJ38_10975"
     CDS             182..796
                     /locus_tag="VLJ38_10975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSU40087.1"
                     /translation="MTQPATAGGAAGGGGSTIVRYKAELRKAIRRNANEPEVNFLNIT
                     AMLDIMTIILVFLLKSLGESSNAIPQSDDLRLPTSVARTDPHQEGVTVTLSKTQILVG
                     DQKILALPGRESQAQTGVGAQNKRGGPNDLYIVPLGNVLQTARRTDVALRRAKGLDPS
                     TSEAIIIADKGTPYRLFIEVLFTLGQSEFGKYHLMVMQSKTLGG"
     gene            904..>2055
                     /locus_tag="VLJ38_10980"
     CDS             904..>2055
                     /locus_tag="VLJ38_10980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40088.1"
                     /translation="MELALIFLLELGGLALGSALARAAFSAPSTPQVGRVVAALERAA
                     RAFLLRALTRFGAFFGALLGLLLATGVAAGHAGAALAGAAGMALGAVLAMATAFAATW
                     LGGRAIRAAVARAGAELDLVLTTGLRSAGATGIAAQALGVLGALGLLGVGYWFHHGDM
                     AASAGEIARRSALSLPGYAVGTALVALWLHVTCGAYATSARAGELRGELLDAGVARHI
                     TQNPALVASLVGERLEHGALAARLFGATALATVASVWLALGSGTSEAAELRFVAFPLL
                     LWAFGLVGNGAGLFVARALEAQGALPALVRGQACAAGVWLVGLLGAGYWLYPESWLVW
                     FLPGAAGFVGGATAASATARAFARRRGALRDALDGLGVGAFAPQAAAFGF"
BASE COUNT          286 a          689 c          717 g          363 t
ORIGIN      
        1 tacatcaccg ccaaccccgg tacggagtac cagatcctca tcaacgtgat cgacgcgctc
       61 cggcgcacgg cgaccggcgt gccgctcttc gaaaacgtca atttcaaggt gccgcgatga
      121 cggctctttc gctcatactg accgggttcg agcagagggc cgtgaatcag acgaggtggg
      181 cgtgacacaa ccagcgaccg caggtggcgc cgcaggcggc ggaggaagca cgatcgtccg
      241 ctacaaagcg gagctccgga aggcgattcg ccgcaacgcg aacgagccgg aggtaaactt
      301 cctcaacatc accgccatgc tcgacatcat gacgatcatc ctcgtctttt tgttgaagag
      361 cttgggtgaa tcgagcaacg ccatcccaca gagtgacgat ctgcgcttgc cgacctccgt
      421 cgcgcgcacg gatccgcatc aggaaggcgt caccgtcacg ctctccaaga cgcagatcct
      481 cgtcggcgat cagaagattt tggcgcttcc cggccgcgaa tctcaggccc aaacgggggt
      541 tggtgctcaa aacaagcgcg gtggcccgaa cgacctctac atcgtgccgc tcggcaacgt
      601 gctccagacg gcccgccgca cggacgtggc gctccggcgc gccaaggggc tcgatccatc
      661 cacctccgaa gcgatcatca tcgccgataa gggcacgccc taccgtttgt tcatcgaggt
      721 gctgttcacg ctcggacaga gcgaattcgg caagtatcac ctgatggtga tgcaatcgaa
      781 gacgctcggc ggctgagccg ctcggcgccg cacgggcctc tcgcgcgaac gccggacgag
      841 tagccatcgt caaggcccta gcccttcggt gctcgcctcg ggtactgaac gcggggtctt
      901 tcgatggagc ttgcgctcat cttcttgctg gaactcggcg ggctcgcgct cgggtcggcc
      961 ctcgcgcggg cggcgttcag cgcgccgagc acaccgcagg tcggacgtgt cgtcgcggcg
     1021 ctcgaacgcg cggcgcgcgc cttcttgctg cgcgctctca cgcgtttcgg cgcgttcttc
     1081 ggcgcgctgc tcgggctgct cttggcaaca ggcgtcgctg ccggccacgc aggggccgcc
     1141 cttgctggag cggccggcat ggctctcggc gcagtgctcg ccatggccac ggcgttcgcc
     1201 gcgacgtggc tcggtggtcg cgcgatcagg gcggccgtcg cgcgcgctgg ggcagagctc
     1261 gatctggtgc tcacgacggg gctacgtagc gcgggggcga cgggcatcgc ggcacaggcg
     1321 ctcggtgtgc tcggtgcgct cgggctgctc ggtgtcggct actggtttca ccacggcgac
     1381 atggccgcga gcgcgggcga gatcgcgcgc cgctcggcgc tgagcttgcc ggggtatgcg
     1441 gtgggcaccg cgctcgtcgc gctctggctg cacgtgacgt gcggtgcgta cgccacgtcg
     1501 gcgcgcgccg gagagctccg cggcgagctg ctcgacgccg gcgtggcgcg acacatcacg
     1561 cagaacccgg cgctcgtcgc gagcctcgtc ggcgaacgcc tcgagcacgg cgctctggcg
     1621 gctcgtcttt tcggcgccac ggcgctcgcg actgtagcca gcgtttggct cgcgctcggg
     1681 tcgggcacga gcgaggcggc cgagctgcgc ttcgtggcgt ttcccttgct tctatgggct
     1741 ttcgggctcg tcggcaacgg cgcggggctg ttcgtcgcgc gtgcgctcga ggcgcaaggc
     1801 gcgttgccgg cgctcgtgcg cggacaggcg tgcgcggcgg gtgtctggct cgttggactg
     1861 ctcggtgccg gctactggct ttatccagag tcgtggttag tttggttctt gccgggcgcc
     1921 gcgggtttcg tcggcggagc cacggcagca tcggcgaccg cgcgtgcctt cgcgcgtcga
     1981 cgcggcgcgc ttcgcgacgc gctcgacgga ctcggtgtcg gcgcgttcgc tcctcaagct
     2041 gcagcgttcg gcttc
//
LOCUS       DATIML010000640         3182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_710230, whole genome shotgun sequence.
ACCESSION   DATIML010000640 DATIML010000000
VERSION     DATIML010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_710230"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..534)
                     /locus_tag="VLJ38_10985"
     CDS             complement(40..534)
                     /locus_tag="VLJ38_10985"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40089.1"
                     /translation="MTPARPGPSPYSKLVQKGDHAYVARDYDAAIAAYREEIQKNPNG
                     ALGHYRLAEVELAKGSFDEAEKSLQTALRVVGKDEATKSKLLLVLADLKERQKAYDEA
                     VVRWKACAEHAQATGTGYAATATERIRRADEWKKISADAAEVKARIEKRIQEADESMK
                     KSSK"
     gene            793..1896
                     /locus_tag="VLJ38_10990"
     CDS             793..1896
                     /locus_tag="VLJ38_10990"
                     /inference="COORDINATES: protein motif:HMM:NF013236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HSU40090.1"
                     /translation="MNWGSTMLLVTVRPYPWQALDRVPRAAVKQLARLREHVAEVRTD
                     EVERTLAALVGASIDVSVTTLRVGKPPRELTEVGLGVGAGNLTIGAEPALVTALLERI
                     LARPFALARPGAELEPSVVGAFAALGVEVARRVTSEPITLVTPLAARDDALCALVKVT
                     VDGRAFAAYALSALAPSPSHGARAPDPARLGGLPLEVPLVVARSLVTRDELRRLAPGT
                     AFMPGERAWVDARGSGRGVLAAATAERGVAVELPPDGRLVLRGETVELLPDAPDSTPQ
                     TMSDADDMNQTLVDAALEAPVIVRVELGSVSMTAADWARLRTGDVIETGRRVAEPVIL
                     RVAGHVVARGELVDVDGEVGVRVRELVGNQPER"
     gene            1922..2671
                     /locus_tag="VLJ38_10995"
     CDS             1922..2671
                     /locus_tag="VLJ38_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HSU40091.1"
                     /translation="MTADERVALAERLRAIRERIAVAAAKTGSANPVRLIAVSKGQPA
                     SLVRAAYELGQRDFGENYVQELAQKSEALRDLPELRFHLIGHLQRNKVKHVVEHAVAV
                     HSVDSPALLAELGRRALGRELPAERRAFGGDGRLPLLVEVSIASEAQKSGLPPHELGA
                     LLAEAERTGGVRLVGLMCVPPFMDDPTASRPYFDALARLREEHGGPQRLPELSMGMTA
                     DFEHAIAAGATVVRVGTAIFGARQPRPAKDG"
     gene            2674..>3182
                     /locus_tag="VLJ38_11000"
     CDS             2674..>3182
                     /locus_tag="VLJ38_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU40092.1"
                     /translation="MARARGRTGPDEPTLLGHAAARGAFGAPPAPLAERMRPRSLDEV
                     VGQEHLLARGKPLRETIESDRLPSIILWGPPGSGKTTLASVIARRTRTEFVGFSAVLG
                     GVQELRAIIEQARERRAYHGRGTTLFVDEIHRFNKSQQDAFLPHLESGTIALIGATTE
                     NPSFAVNAA"
BASE COUNT          458 a         1076 c         1141 g          507 t
ORIGIN      
        1 tgcgcgtcaa agtcgcgaag taggcgccgc gggctcggac tacttcgagc tcttcttcat
       61 cgactcgtcg gcttcctgga tccgcttctc gatgcgtgcc ttcacttcag cggcatcggc
      121 cgagatcttc ttccactcgt cggcgcgccg gatgcgttcc gtcgccgtcg ctgcatagcc
      181 ggtgcccgtc gcctgggcgt gttcggcgca agccttccag cgtacgacgg cctcgtcata
      241 ggccttctgt cgctccttga ggtcggcgag caccaagagc agcttgctct tggtcgcttc
      301 gtccttgccc acgacgcgca gggccgtctg caaagacttc tccgcttcgt cgaagctgcc
      361 cttggcgagc tcgacctcag cgaggcggta gtgaccgagc gcgccgttcg ggttcttttg
      421 gatttcttcc cgataggccg cgatggcggc gtcgtagtcg cgggccacgt aggcgtggtc
      481 gcccttttgc acgagcttgg agtacggact cggaccgggt ctcgcgggcg tcactggggc
      541 cggcgtggag ggtgcagcag cgggcgtggc ggctgccggc gaaggagccg gtgcagcctg
      601 ggaaggttgg gttccggggg gcgtctccgc gaacgccggg acactcacag ccaacgtgac
      661 caaagcgagt cgaatggggg tcgaacgcgg cataccgccc aggctaacac gccgctggaa
      721 cgcgaatagc tgcgtgattt ccgccccgtc gcgtgtcact ggttcgccca atagacaatc
      781 cacaggctgt ggatgaattg gggctctacg atgctgctcg tgacggttcg accctatccc
      841 tggcaggcgc tcgaccgcgt gccccgcgcc gcggtcaagc agctcgcgcg gctgcgggag
      901 catgtcgccg aggtgcgtac ggacgaggtc gagcgaacgc tcgcggcgct cgtgggggcg
      961 agcatcgacg tctcggtcac gacgctgcgc gtcggaaagc ctccacgtga gctcacggaa
     1021 gtgggactcg gggttggcgc cggcaatctg acgatcggcg ccgagccggc gctcgtgaca
     1081 gcgctgctcg agcgcatttt ggcgcggccg ttcgcgctcg cgcggcccgg cgcggagctc
     1141 gagccgagcg tcgtcggggc atttgccgcg ctcggcgtcg aggtggcacg gcgtgtcacg
     1201 agtgaaccca tcaccctggt gacgcccctc gcggcgcgcg atgacgcact gtgcgcactc
     1261 gtcaaagtga ccgtcgacgg gcgcgcgttc gccgcgtacg ccttgagcgc gctcgcgccc
     1321 tcgccgagcc atggcgccag agcgcccgac ccggcgcgcc tcggcggctt gccgctcgag
     1381 gtgccgctcg tggtcgcccg atcactcgtg acacgcgacg agctccggcg gctcgcgccg
     1441 ggcactgcct tcatgccggg cgaacgggcg tgggtcgatg cgcgcggctc cgggcgcggc
     1501 gtgctcgccg ccgcgacggc cgagcgcggt gtggcggtcg agctgccgcc ggacggccgt
     1561 ctcgtgctac ggggagaaac cgtcgagctt ctgccggacg cgccggactc gacgccccaa
     1621 accatgtccg acgcggacga catgaatcag acgctcgtgg acgcagcgct cgaagcgccg
     1681 gtcatcgtac gcgtcgagct cggcagcgtg agcatgacgg ccgccgattg ggccaggctc
     1741 cgaaccggtg acgtgatcga gactgggcgg cgcgtggcgg agccggtgat tttgcgcgtg
     1801 gccggtcacg tcgtcgcgcg cggcgagctc gtcgacgtcg acggcgaggt cggcgtccgg
     1861 gtgcgcgagc tcgtcggcaa tcagccggag cggtgagagc gtggcgcccg aggcggacgc
     1921 gatgactgcc gacgagcgcg tcgcgcttgc cgaacggctg cgcgcgattc gagagagaat
     1981 cgcagtcgcc gcggcgaaaa ccggcagcgc aaacccagtg cggctcatcg cggtctcgaa
     2041 gggtcagccc gcctcgctcg tccgtgcggc gtacgagctc ggacagcgcg atttcggcga
     2101 gaattacgtg caggagctgg cgcagaagtc ggaggcgctg cgtgatttgc ccgagctccg
     2161 ctttcacctg atcggacacc tgcaacgcaa caaggtgaag cacgtcgtcg agcacgccgt
     2221 cgccgttcac tccgtggatt caccggcgct gctcgcggag ctcggacgcc gcgcgctcgg
     2281 acgggagcta cccgccgagc ggcgcgcgtt cggcggtgac ggacgcttgc cgctgctggt
     2341 cgaggtcagc atcgcgagcg aagcgcaaaa gagcggcctg cccccgcatg aactcggagc
     2401 cctgctcgcc gaggcagaac gcaccggagg cgtgcgtctc gtcgggctca tgtgcgtgcc
     2461 gccgttcatg gacgatccga cggcatcgcg gccgtacttc gatgcgctcg cgcgactgcg
     2521 ggaagagcac ggcggccctc agcgtttacc cgagctcagc atgggcatga ccgccgactt
     2581 cgagcacgcg atcgccgcgg gcgcgacggt cgtgcgcgtc ggtacggcga ttttcggcgc
     2641 acgccagccc cggccggcga aggacggctg aatttggcgc gcgctcgtgg acgcacgggg
     2701 ccggacgaac ccacgttgct cggccacgcc gccgcgcgcg gcgcgttcgg cgcgcccccg
     2761 gcaccgctcg ccgagcgcat gcgcccccgt tcgctcgacg aggtcgtggg ccaggagcac
     2821 ctgctcgcgc gcggcaagcc cctgcgcgaa acgatcgaga gcgatcggct gccgtcgatt
     2881 attttgtggg ggccgcccgg ctcgggcaag acgacgctcg ccagcgtgat cgcgcggcgg
     2941 acgcgcacgg agttcgtcgg attttcggcg gtgctcggcg gcgttcagga gctgcgcgcc
     3001 atcatcgaac aggcgcgcga gcgccgcgcc tatcacggcc gcggcacgac gctcttcgtc
     3061 gacgagatcc atcgcttcaa caagagccaa caagacgctt tcttgccgca cctcgagagc
     3121 ggcacgatcg cgctcatcgg tgccaccacg gagaacccgt cgttcgcggt gaacgcggcg
     3181 tt
//
LOCUS       DATIML010000641         2976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3305699, whole genome shotgun sequence.
ACCESSION   DATIML010000641 DATIML010000000
VERSION     DATIML010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2976
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3305699"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VLJ38_11005"
     CDS             <1..473
                     /locus_tag="VLJ38_11005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40093.1"
                     /translation="AGDRVEVLAGVLVRARSGGVQALCVSSGDAPSRIAELSGADDAL
                     GVTAALAGSRPRSVPAGTPGFARRPLVSAFASKVGVTQAAPDDETDAPRPERGDLVEH
                     FAFGICEVLSATGDRLVLRDARGSGRTREIASEHLGITGPVEHDGKRLFRLTRR"
     gene            528..2483
                     /locus_tag="VLJ38_11010"
     CDS             528..2483
                     /locus_tag="VLJ38_11010"
                     /inference="COORDINATES: protein motif:HMM:NF023324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-1,4-glucan--maltose-1-phosphate
                     maltosyltransferase"
                     /protein_id="HSU40094.1"
                     /translation="MSPATEPPRVVIEEITPAVDGGRYPVKVSAGGTLDVGANVFRDG
                     HDLVAARVIFLAPGEPQWRSTPLAYKFEPDRWYGSFRVEQPGRWHYGVEAWPDHFGTW
                     RSELQKRVQAGQDVRGELLVGALLLERYAALLRGDVARHVRELAKTMADDAAALDARL
                     RAALDESLLAEVYGPLEPADLTRSPLFELVVDRPEASFAAWYELFPRSQSTKPGVHGT
                     FLDTARRLPEIAALGFDVIYLPPVHPIGETHRKGRNNAPAAEPGDVGSPWGIGSSAGG
                     HTAVHPELGTLADFEHLVASARDLGLEIALDYALQCSPDHPWVKEHPEWFFVRPDGSI
                     RYAENPPKKYEDIYPLNFWCKDREAMWNACRDVLLFWAERGVRTFRVDNPHTKPFAFW
                     EWVLREVHTAYPDVVFLSESFTRPNRMKALAKLGFNQSYTYFTWKNTAWELRDYFREL
                     TSPPLTLYYRPNCFTNTPDILHEYLQHGGRPAFRVRLVLAATLAPLYGIYSGFELCEG
                     TPVRPGSEEYLDSEKYQLVTRDYNAPGNIKQDIARLNRIRRENPALQTLPNLEFVQSD
                     FDGILAYRRYAPGNELLVVVNLDPHLMHETVIDVPLDRLGISEQEPYEVFDLLSGARY
                     TWRGRRNYVKLDPSERVAHVFRITRRG"
     gene            2493..>2976
                     /locus_tag="VLJ38_11015"
     CDS             2493..>2976
                     /locus_tag="VLJ38_11015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40095.1"
                     /translation="MTQSDARRDPSARPVRAFQSGLTFAVACRLAVAVAASLVSVTAC
                     SKRPPPSPIPSASPAPPAVSALKFGRLGTPTGFELTASATGATLVFAPLERADGSLRK
                     LELDPNGAFASAASTALEPGALHGEASDLTATWVGQRLALAWVEREGAKARVRAAWSG
                     A"
BASE COUNT          447 a         1076 c          984 g          469 t
ORIGIN      
        1 cggcggggga tcgcgtggaa gtgctggcgg gcgtgctcgt gcgtgcccgt tcgggcggcg
       61 tgcaagcgct gtgcgtgtct tcgggtgacg cgccgtcgcg catcgcggag ctgtccggcg
      121 ccgatgacgc gctcggcgtg acggccgcgc tcgccggctc tcggccgcgc agcgtgccgg
      181 cgggaacgcc cggtttcgcg cgacggccgc tcgtgtccgc gttcgcgtcg aaggtcggcg
      241 tcacgcaagc cgcacccgac gacgaaaccg acgcaccgcg ccccgagcgc ggtgatttgg
      301 tcgaacattt cgcgtttggg atctgtgagg tgctctcggc gacgggcgac cggctcgtcc
      361 tgcgcgacgc gcgcggttcg ggccgcaccc gtgaaatcgc cagcgagcac ttgggcatca
      421 cggggcccgt cgagcacgac ggcaagcgtc tgtttcgcct cactcggcgc tgagccgcgc
      481 tgccggcttg ctccggctcg aacggctctg gtacacgaag tttcgcgatg agccctgcta
      541 ccgaaccccc gcgcgtcgtg atcgaggaga taacaccggc ggtcgacggc gggcgttatc
      601 ccgtcaaggt cagcgcgggc ggcaccctcg acgtcggcgc gaacgtgttc cgcgacgggc
      661 acgatctcgt cgcggcgcgc gtcatcttcc tcgcgccggg cgagccgcag tggcgctcga
      721 cgccgctcgc gtacaagttc gagcccgatc gctggtacgg gagctttcgc gtcgagcaac
      781 ccggccgctg gcactacggc gtggaagcgt ggcccgatca tttcggcacc tggcgctcgg
      841 agcttcagaa gcgcgttcag gccgggcaag acgtccgcgg cgagctgctc gtgggtgcgc
      901 tcttgctcga acgctacgcc gcgctgctcc gcggcgacgt cgcccgccac gtgcgcgagc
      961 tcgccaagac gatggcggac gacgccgcgg cgctcgacgc gcgcctgcgc gccgccctcg
     1021 acgagagctt gctcgccgag gtgtacggcc cgctcgaacc cgccgatctc acgcgctcgc
     1081 cgctgttcga gctcgtcgtc gaccggcccg aggcctcctt cgcggcctgg tacgagctct
     1141 ttccgcgttc ccaaagcacg aaaccgggcg tgcacggcac cttcctcgac acggcgcgcc
     1201 gcctgccgga aatcgccgcg ctcggcttcg acgtgattta ccttccgccc gtccacccca
     1261 tcggcgagac gcaccgcaag gggcgcaaca acgcaccggc ggccgagccc ggcgacgtcg
     1321 gcagcccttg ggggatcggc tcgagcgcgg gcggccacac cgcggtgcac cccgagctcg
     1381 gcacgctcgc ggacttcgag cacttggtcg cgagcgcgcg tgacctcgga ctcgagatcg
     1441 cgctcgacta tgcgctgcag tgctcacccg atcatccttg ggtcaaagag cacccggaat
     1501 ggttcttcgt gcggccggac ggcagcatcc gctacgccga aaacccgccc aagaaatacg
     1561 aggacatcta cccgctgaac ttctggtgca aggaccgcga ggcgatgtgg aacgcgtgtc
     1621 gcgacgtgct cttgttctgg gccgaacgcg gcgttcgcac cttccgcgtc gataacccgc
     1681 acaccaaacc cttcgccttt tgggagtggg tgctgcgcga ggtgcacacg gcttaccccg
     1741 atgtcgtgtt cttgagcgaa tccttcacgc gcccgaaccg gatgaaggcg ctcgccaagc
     1801 tcggcttcaa ccagagctac acgtacttca cgtggaagaa cacggcctgg gagctgcgcg
     1861 actatttccg cgagctcact tcgccgccgc tgacgctcta ttaccggccg aattgcttca
     1921 ccaacacgcc cgatatcctg cacgaatacc tgcaacacgg cgggcgtccc gcctttcgcg
     1981 tgcggctcgt gctcgccgcc acgctcgcgc cgctctacgg catttacagc ggcttcgagc
     2041 tctgcgaggg cacacccgtg cgtcccggca gcgaagagta cctggacagc gagaagtatc
     2101 agctcgtcac gcgcgactac aacgcgccag gcaacatcaa gcaggacatc gcgcggctca
     2161 accgcatccg gcgtgaaaat ccggcgctgc agacgctacc gaacctcgag ttcgtgcaga
     2221 gcgatttcga cggcatcctc gcgtatcgcc gctacgcgcc gggcaacgag ctcctcgtcg
     2281 tcgtgaacct cgatccgcac ctgatgcacg agacggtcat cgacgtgccg ctcgatcgct
     2341 tggggatctc cgaacaagag ccgtacgagg tgttcgacct cttgagcggc gcgcgctaca
     2401 cgtggcgcgg gcggcgcaac tacgtgaagc tcgacccgag cgagcgcgtc gcgcacgtgt
     2461 tccgcatcac gcgacgcggt taggcgcgcc ccatgacgca gagcgacgcc cgtcgtgatc
     2521 cgtcggcgcg ccccgtgcga gcgtttcaga gcggtctcac gttcgccgtc gcatgccgac
     2581 tcgccgtggc cgtcgctgcg tcactcgtgt ccgtcacggc ctgcagcaaa cgcccgccgc
     2641 cgtcgcccat tccgtccgcg agcccagcgc ctcccgccgt ttccgcgctg aaattcggcc
     2701 gtctcggcac gccgaccggc ttcgagctca ccgcgagcgc gacgggcgcg acgctcgtct
     2761 tcgcgccgct cgaacgcgcc gacggctcgc tgcgcaagct cgagctcgac ccgaacggag
     2821 cgttcgcgag cgccgcgagc acggcactcg agccgggcgc gctccacggc gaagcgagcg
     2881 atctcacggc cacgtgggtc ggccagcgac tcgcgctcgc gtgggtggag cgtgaagggg
     2941 cgaaggcgcg cgtgcgcgcc gcctggtccg gcgcct
//
LOCUS       DATIML010000642         2251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1866018, whole genome shotgun sequence.
ACCESSION   DATIML010000642 DATIML010000000
VERSION     DATIML010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1866018"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1164)
                     /locus_tag="VLJ38_11020"
     CDS             complement(<1..1164)
                     /locus_tag="VLJ38_11020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40096.1"
                     /translation="MSGAALSLLFGLPFAVVGPVVRAKLSARAAARGFSADVERVRPT
                     WTGVWLFGVGIRGRNGRITGRLEAVRVPFGDAAVEVHGGRLTLRGAAVELEHELAPEQ
                     AEPSGNGGGRRLVRADGLSVAWNELDRRGSTIKIWGLAAERAGDGDRLHLDAARAETR
                     GGVFETKNVDVSLAARGSARLRQVRVERLGAALDLELLGGTDPASSISGRPPGGSARA
                     ANGSAAHQPVTDGASSRARYALGLAAAAEIAKQALPEGAQARVDSALVALAFHGEHLG
                     FGPSEVTLRREATALALELEPSERPSAGATALALRGKLPFGPEPPVVELEGGPVSLAA
                     LGVRDGELGLTRPRDATLEAHLRVELGNGTLRGSGTGALVNLSLRRPELGAREV"
     gene            1369..>2251
                     /locus_tag="VLJ38_11025"
     CDS             1369..>2251
                     /locus_tag="VLJ38_11025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40097.1"
                     /translation="MAAVAPEIDGEFPRWRLAIAVGAALAFYGATMLDVATGREDWPI
                     SPYPMYSDMPGSTASRFRISGVSQDGEFTLDDAQTAPFHGSRLLVISRKLEHHPAKRA
                     QFIRKLASRYEARRASEGWPELHAIRFYRDEWDLREYLKGNERPQQTLVSTMYLPPPT
                     LLERLSAEANGKATPEAPVRAPAGDMIVDFARAQCTADCSAFADPLAAGGSALRLTPM
                     SARRASAAASLELATGRYVVLLRMRTTAEPGQDKLELELDGDRQGELGNYREDLSDSG
                     WVWASASSAKPPLALEVK"
BASE COUNT          342 a          844 c          746 g          319 t
ORIGIN      
        1 cacttcgcgg gcaccgagct cggggcggcg cagcgaaaga ttgacgagcg cacccgtgcc
       61 cgagccgcgc agcgtgccat tgccgagctc gacgcgcagg tgcgcctcga gcgtcgcgtc
      121 gcgcgggcgc gtgagaccga gctcgccgtc gcgcacgccg agggccgcga gactcaccgg
      181 gccgccctcg agctccacga cgggcggctc cggaccgaac ggcagcttcc cgcgcagggc
      241 aagcgccgtc gcgcccgcgc tcggtcgctc actcggttcg agctcgagtg cgagcgccgt
      301 cgcttcacga cgcagcgtca cctcgctcgg tccgaacccg agatgctcgc cgtgaaacgc
      361 gagcgcgacg agcgccgaat cgacccgcgc ctgcgcgcct tccggcaacg cttgcttcgc
      421 aatttcggcg gcggcagcga gtccgagggc gtagcgtgcg cgcgaggacg cgccgtccgt
      481 cacgggttga tgcgcggcgg agccgttcgc cgcgcgcgcg gagccgcccg gcggccgccc
      541 gctgatgctc gaggccgggt cggtgccgcc cagtaactct aggtcgaggg cggctccgag
      601 acgttcgact cgaacctgac ggagccgcgc gctcccacgg gcggcgagcg agacatcgac
      661 gttcttggtc tcgaaaacgc cgccgcgcgt ctctgcgcgc gccgcatcga ggtgcagccg
      721 atcgccgtcg ccggcccgct ctgccgccaa accccagatt tttatggtcg aaccgcgtcg
      781 atccagctcg ttccacgcga cgctcaagcc gtccgcacgc acgagtcgtc ggccaccgcc
      841 atttccgctc ggctcggcct gctcgggcgc aagctcgtgt tcgagctcca cggcggctcc
      901 ccgcagcgtc aggcgtccac cgtgcacctc gaccgcggcg tcgccgaacg gcacgcgcac
      961 ggcctcgagg cgacccgtga ttctcccgtt acgcccgcgg atacccaccc cgaacagcca
     1021 cacccccgtc cacgtcggac gcacacgctc gacgtctgcg ctgaacccgc gggcggcggc
     1081 gcgtgccgag agcttcgctc gcacgaccgg tccgacgacg gcgaagggca ggccgaacag
     1141 cagactgagc gccgcgcccg acactgcgac ccgagctccg cggctcaggt cccgccatag
     1201 cgacaacacg ctcggcactg acgggaggct agcgccggct catgctccgc gcgactttcg
     1261 gacggcggcc gctacgccgc gcgacggcgc gcgccgcaac gccgcgaatg aacgcacatt
     1321 ccccttggca ttggctcggc cccgcacgac gatacggccg catcctcgat ggcagccgta
     1381 gcgcccgaga ttgacgggga gtttccgcgc tggcgcctcg ccatcgccgt cggcgcggcc
     1441 ctcgccttct acggcgcgac catgctcgac gtcgccaccg gccgcgaaga ttggccgatc
     1501 tcgccctacc ccatgtacag cgacatgccc gggtcgacgg cgtcgaggtt ccggatcagc
     1561 ggcgtttcgc aagacggcga gttcacgttg gacgacgccc agacggcgcc attccacggc
     1621 tcgcggctgc tcgtgatcag ccgcaagctc gagcatcatc ctgccaagcg cgctcagttc
     1681 atccgcaagc tcgcgagccg ctatgaagcc cggcgcgcga gcgagggttg gcccgagctc
     1741 cacgccattc gtttctatcg tgacgagtgg gatctccgtg agtacctgaa aggtaacgag
     1801 cgcccccagc agacgctcgt gagcaccatg tatctaccgc ctcccacgct gctcgagcgc
     1861 ttgagcgccg aagcgaacgg caaggccacg cccgaagctc ccgtgcgcgc tccggcggga
     1921 gacatgatcg tggactttgc gcgcgcgcaa tgtactgccg actgctccgc attcgccgac
     1981 ccgctcgcgg cgggcgggtc cgccttgcgc ttgacgccca tgagcgctcg acgggcgagc
     2041 gcggcagctt cgctcgagct tgctacgggc cgctacgtcg tgttgcttcg catgcgaacg
     2101 accgcggaac ccggtcagga caagctcgag ctcgagctcg acggcgatcg acaaggcgag
     2161 ctcggcaact accgcgagga cctgtccgat tctggttggg tgtgggcgag cgcctcatcg
     2221 gccaagccgc ccttggcgct ggaggtgaag c
//
LOCUS       DATIML010000643         3333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3881973, whole genome shotgun sequence.
ACCESSION   DATIML010000643 DATIML010000000
VERSION     DATIML010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3881973"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1303
                     /locus_tag="VLJ38_11030"
     CDS             <1..1303
                     /locus_tag="VLJ38_11030"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HSU40098.1"
                     /translation="PSYETSLRLNSDTSFASVTAYSSNDLAHWKFEGDVLTAAGSGSE
                     IAGSSWIGRLGVAYNANTKKYVLVSQYQGSAGTGELFATSATPAGKFVFDHLQAAVTN
                     VANTTTGDQTIFVDDDGSAYVICSSSSGRSNLYVAPLRASDFLNVEPATRIFGGAGRE
                     GNAMFKHGNHYYFCSSDLHGWNASHTYCISATNILGPYGAEFVLDDTDADFSHVTQTG
                     FFITVTGSAGSFVIFAGDRWADFAGNGSGYNQWLPITFDGDTPHFQSLSEWSIDVQSG
                     TLQVGPGNNYALNPSFEADRVTMTQPAGWVTSTATSGATPYTNVKDAHSGNWGWQLTS
                     TADYDATIAQSLSGLPNGTYTLSAWVKSSGGQAQAELYVTGFGASELTASLTKALASY
                     TQVSIPGVAVSNGKAEIGVRTRASAKQTITFDDVTFVRMGP"
     gene            complement(1329..2234)
                     /locus_tag="VLJ38_11035"
     CDS             complement(1329..2234)
                     /locus_tag="VLJ38_11035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU40099.1"
                     /translation="MEEELSDPERPCVTVLPPAFVAAREEFLAMVADVRPELHRYAAR
                     LTGSVIDGEDIVQDTLAKALYALSQAAEVPSLRPWLFRIAHNTALDFLKSHGRKYAAP
                     EVELEHIAAEDVMPDPLSVRAALARFLTLPVPQRSAVILKDVLGHSLEETAETMATSV
                     VAVKALLSRGRAKLGEQDGTPAAPASEARAELERYVSRFNARDWDGVRALVSDDCRLD
                     LVSKSQRRGKQVGFYFARYEKENLNARLVRLEGRLALAVYAAAAQAPAYFILLEFADG
                     RVRLIRDYRYVPYIVHEAEFELVGD"
     gene            complement(2245..2595)
                     /locus_tag="VLJ38_11040"
     CDS             complement(2245..2595)
                     /locus_tag="VLJ38_11040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40100.1"
                     /translation="MRTVLVRYKTKEDQAEANAKLVRTVFDELAAQVPGGFHYVTFRL
                     ADGVTFVHLATMEGATPLQSLPAFQTFQADIRARCVEPPVLSEATVVGSYELPEFVAV
                     AEAKAPAAAERRAD"
     gene            2683..3231
                     /locus_tag="VLJ38_11045"
     CDS             2683..3231
                     /locus_tag="VLJ38_11045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40101.1"
                     /translation="MLRPTRRLVAALAIATSLAVTGCVVANYDYGPARQSPVFVLDSS
                     ITPSTLTPLTVKSDATVHLAVTAFAEDAGEELMSALYVDYKHKGGYFVLPHRYGSSAF
                     ETPRHVEYDVTKPLLPTSGCHMLTLMLFHESDWDDAHSEIIGIPPDLASVTWIGRFGA
                     DGTSVPLATCPDVSTESPITSP"
BASE COUNT          609 a         1119 c         1058 g          547 t
ORIGIN      
        1 gccgagctac gagacgagcc tgcgcctgaa cagcgacacg agctttgcgt ccgtcacggc
       61 gtattcgtcg aacgatctcg cgcattggaa gttcgagggc gacgtgctca cggcggcggg
      121 cagcggcagc gagattgccg gcagctcgtg gattggacga ctcggcgtcg cctacaacgc
      181 gaacacgaag aagtacgtgc tcgtttcgca gtaccagggc tccgcgggca cgggcgagct
      241 cttcgcgacg agcgctacgc cggcgggcaa attcgtgttc gatcacctgc aagccgcggt
      301 caccaacgtc gcgaacacga cgaccggtga ccaaacgatt ttcgtcgacg acgacggcag
      361 cgcctacgtc atctgctcga gcagctcggg gcgttcgaac ctgtacgtcg cgccgctgcg
      421 cgcctccgac tttttgaacg tcgagcccgc gacgcgcatc ttcggcggcg cggggcgcga
      481 ggggaacgcc atgttcaaac acggcaacca ttactacttc tgctcgtccg atttgcacgg
      541 ctggaacgcg tctcacacct attgcatctc cgcgaccaac atcctcgggc cctacggcgc
      601 cgagttcgtg ctcgacgaca cggatgcgga cttcagtcac gtcacgcaaa cgggattctt
      661 catcaccgtg acgggcagcg ccggctcctt cgtgatcttc gcgggtgatc gctgggcgga
      721 cttcgccggc aacggcagcg gctacaacca atggctgccg atcacgttcg acggtgacac
      781 ccctcacttc caatcgctga gcgagtggag catcgacgtt caaagcggca cgttacaagt
      841 cggacccggc aacaactacg cgctcaatcc gagcttcgag gccgatcgcg tcaccatgac
      901 gcagcctgcc ggttgggtca cctcgaccgc gacgagcggc gccacgccgt acacgaacgt
      961 gaaagacgct cacagcggca actggggctg gcagctcacc tcgacggccg actacgacgc
     1021 aaccatcgcg cagagcctga gcggcttacc gaacggcacc tacacgctgt ccgcctgggt
     1081 caagagcagc ggcgggcagg cccaagccga gctctacgtg accggcttcg gcgcgagcga
     1141 gctcaccgcg tcgctcacga aggcgctagc gagctacacg caagtgagca tccccggcgt
     1201 cgccgtctcg aacggcaaag ctgaaattgg tgtgcggacg cgcgccagcg cgaagcagac
     1261 catcacgttc gacgacgtga cgttcgtgcg catggggccg tgaacgcgca tggcgcgatc
     1321 ccagacgctc agtcgccgac gagctcgaac tccgcttcgt ggacgatgta cggcacgtaa
     1381 cggtagtcgc gaatcagccg cacgcggcca tccgcgaact cgagcaggat gaaataggcg
     1441 ggagcttgcg ccgcggcggc gtacacggcg agggcgagcc gtccctcgag gcgcacgagc
     1501 cgcgcgttga ggttctcctt ctcgtagcgc gcgaagtaaa agcccacttg tttgccacgg
     1561 cgctgcgatt tcgaaactag atcgagccgg cagtcatcgc tcacgagcgc gcgcacgccg
     1621 tcccaatccc gcgcgttgaa gcgactcacg tagcgctcga gctcggcacg tgcttcggac
     1681 gccggcgcag cgggcgttcc gtcttgctcg ccgagcttgg cacggccgcg cgacaagagg
     1741 gctttgacgg cgacgacgct ggttgccatg gtctcggcgg tctcctcgag cgaatggccg
     1801 agcacgtcct tcagaatgac ggcactccgc tgcgggactg gcaacgtgag gaagcgcgcg
     1861 agcgcggcgc gcacgctgag cgggtcgggc atcacgtcct ccgccgcgat gtgctcgagc
     1921 tcgacctcgg gcgcggcgta ttttcggccg tggctcttca agaaatcgag cgccgtgttg
     1981 tgggcgatcc gaaagagcca cggccggagc gacggtacct cggcggcttg gctgagcgcg
     2041 tacagggcct tggcgagcgt gtcttgaacg atgtcttcac cgtcgatgac cgagcccgtg
     2101 agacgcgccg cgtagcggtg aagctccggg cgcacgtccg cgaccatggc gagaaactcc
     2161 tcgcgcgcgg cgacgaacgc tggcggtagc acggtcacgc agggacgctc gggatccgaa
     2221 agctcctcct ccatgcagaa gccgtcaatc cgctcgccgt tcggcggcag cgggagcctt
     2281 cgcctccgcg acggccacga actccggcaa ctcgtacgag ccgacgaccg tggcttcgct
     2341 cagcaccggc ggctccacgc agcgcgcgcg aatgtccgcc tggaacgtct gaaacgccgg
     2401 caaggactgg agtggcgtcg cgccctccat cgtcgccagg tgcacgaacg tgacgccgtc
     2461 cgccaaccgg aacgtcacgt aatgaaagcc accggggacc tgcgccgcga gctcgtcgaa
     2521 gacggtccgc acgagtttag cattggcttc tgcttgatct tctttggttt tgtagcgaac
     2581 gagcacggtt ctcatggttt gcctccgggc tatccgtcgg aagacgaccg agctcggcaa
     2641 aaggatgcgc tgcttcgtct agttggtgtt atttctcggc cggtgctccg ccctacgcgc
     2701 cgactggttg ccgcactcgc gatcgcaacc tcgcttgcgg tcacgggctg cgtcgttgca
     2761 aattacgatt acggaccagc gcgccagagc ccggtcttcg tcctcgacag cagcatcacg
     2821 ccgagcacgc tgacaccgct caccgtcaag tccgacgcga cggtgcacct cgccgtaacc
     2881 gccttcgccg aggacgccgg tgaagagctc atgtcggcac tctacgtcga ttacaagcac
     2941 aagggtggct acttcgtgct acctcatcgc tacggtagca gcgcgttcga gacgcctcgg
     3001 cacgtcgaat acgacgtcac gaagccgctg ctgccgacca gcggctgtca catgcttaca
     3061 ctgatgctgt ttcacgagag cgactgggac gacgcccact ccgagatcat cggcatccca
     3121 ccggacctcg cgagcgtcac ctggataggg cgcttcggcg cggacggcac gtccgtgccg
     3181 ctcgccacgt gtcccgacgt gtccacggaa agccccatca cgagcccgta agccgtcgaa
     3241 cattgcggcc ccgcggggta agtttgcagc aactcgacgg gcaggcgagg caagccgccg
     3301 cactcgctcg cgcccgaagg cgtcgttccg cgg
//
LOCUS       DATIML010000644         5323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4172703, whole genome shotgun sequence.
ACCESSION   DATIML010000644 DATIML010000000
VERSION     DATIML010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5323
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4172703"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /gene="hisB"
                     /locus_tag="VLJ38_11050"
     CDS             <1..591
                     /gene="hisB"
                     /locus_tag="VLJ38_11050"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HSU40102.1"
                     /translation="SDRRARVERATRETQISVDIDLDGTGRASIATPLPFLSHMLEQI
                     ARHGSIDLSVFAEGDVEIDGHHTTEDIGIVLGKAVLDALGDRRGIRRYGSATLPMDEA
                     LVTAALDLSGRPFFVWRVDLPKAKLGNWDVELAEVFFEAFARTAQANLHLRKHEGSNL
                     HHIIEISFKAFARALREAASIDPRSPDVPSTKGMLD"
     gene            588..1217
                     /gene="hisH"
                     /locus_tag="VLJ38_11055"
     CDS             588..1217
                     /gene="hisH"
                     /locus_tag="VLJ38_11055"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HSU40103.1"
                     /translation="MTQTAVVVDIGIGNLRSVAKALEIAGEGRVTVVRSHDPDVVRRA
                     DRVVVPGQGGFAACAEGLAGGLDQALIEAVKSGVPYLGICLGLQVLFEGSEEAPGVPG
                     FGWMRGQVRKLAGGPGIKIPHMGWNQLELADGGHAGLEAAGGQGAWVYFVHSYHAVPE
                     EPGVLRASVSYGSNRVTAAVSRDNVLGTQFHPEKSQAAGLALLAAFLRR"
     gene            1228..1962
                     /gene="hisA"
                     /locus_tag="VLJ38_11060"
     CDS             1228..1962
                     /gene="hisA"
                     /locus_tag="VLJ38_11060"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HSU40104.1"
                     /translation="MEVIPALDLLDGKAVRLRQGRYDEVTVYDDQPHVVAAEWSGRVR
                     RVHVVDLDGAKQGTPVQRVLVRKVVASFGAGVQVGGGVRSMAAIDQYFELGVDRVVLG
                     TAAIRDPELVRTAAEAYPGRIIVAVDARNGNVATDGWLDQSERRALDVVRELSGLGLA
                     AVLYTDIDRDGTEVGPNVDATALLAKEGGVPVIASGGVGKLEHLRALAQAGSGIVGAI
                     VGRALHEHRFSLEEAVAAASERAAHG"
     gene            1955..3517
                     /locus_tag="VLJ38_11065"
     CDS             1955..3517
                     /locus_tag="VLJ38_11065"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40105.1"
                     /translation="MAERGIHDPTEALSRASVFPTHSVPEAPGVPESEHPAPSSAFNG
                     EDFLFHLYRGSELLQDNCVPEAKEELERALRFQPSDAAGQGLLGIVYFRLGMYPRAIG
                     IYEELIRNFPNEISPKVNLALCYLKTGQQHQARDVLEEVIHREPDHKRAWGYYGLALE
                     RLAEYGKAQVAFQHAGQPQLARRMQNRAEEGAVALEPTEGEHELDEVRLAAADAVQEL
                     DAQAPFISAPEEARELEPVRSRRWRAVEPGEEVVPVAPRVSRPSAPPTRAGLASFGAP
                     AVSEPMELPPASRRPTVEPPPTVSPPRDTVPGSPSALVAEVAVGVPDPRERLLIRGSI
                     AVVRVEVGFAIRNEALRAVQPDAAGFMRSALRRKVRGRASDEPFGGPATPWTLLEGTG
                     TAVLAASGERSVAGLELGGEFVYLRESRLMGFDSSARYENGRLPAPAQEPAPIVIVQL
                     SGRGLVLVESERPLRALVVTAEHRVIVRSESVAGWTGRMLAQPLTADDSPTRAHGFVS
                     FSGEGAVLLDDA"
     gene            3514..4191
                     /gene="pgsA"
                     /locus_tag="VLJ38_11070"
     CDS             3514..4191
                     /gene="pgsA"
                     /locus_tag="VLJ38_11070"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HSU40106.1"
                     /translation="MTTSSIPPAPRPARPTRAERRRRRRSLSEDALNVPNLLTMGRVA
                     VIPLVILLLDRASPKDCWWAALVYSAAALTDLIDGWLARRMHVVSVLGKFLDPLADKL
                     LVMAVLIYLVPLGRIPAWAVTLLLARELSVTGLRSIASSEGVVIAAGDDGKSKTALQM
                     VGLLCLILGYPYHLTLGPIDLGDVDLVYVGRALVYVSLVFSIMSALSYTRLFAEAVEA
                     KNQRGAP"
     gene            4287..4742
                     /locus_tag="VLJ38_11075"
     CDS             4287..4742
                     /locus_tag="VLJ38_11075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40107.1"
                     /translation="MFHSALRIFARGVCLLATIAVFSTSCSRQPEGERCDYDWAGPTQ
                     DCDSGLVCTPCGNLQGSPVDRCCRSDNTYTDPRCAPAAAPNQISCNTRKEPDSNTGGS
                     TSGSAGSGTGGSSAGKAGAATTGGSAGTAGSGEMPISGNAGEATAGSGT"
     gene            4746..5003
                     /gene="sctS"
                     /locus_tag="VLJ38_11080"
     CDS             4746..5003
                     /gene="sctS"
                     /locus_tag="VLJ38_11080"
                     /inference="COORDINATES: protein motif:HMM:TIGR01403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030254 - protein secretion by the type III
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     subunit SctS"
                     /protein_id="HSU40108.1"
                     /translation="MPSLAALGDLGENAVLLALVVSLPVIGVAALVGALVSALQAATQ
                     LQDATLSHLPRFLAVALALVVMGPWMGAEIAKFALEVFAAR"
     gene            5061..>5323
                     /locus_tag="VLJ38_11085"
     CDS             5061..>5323
                     /locus_tag="VLJ38_11085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40109.1"
                     /translation="MTLGGRVLVGEPGRLVVADAFQRVTVTGEGLVAEPGELVVVRGR
                     LARGALVESKLVERLQAPFPRGDGMLQRFCFEGTATRLAARARV"
BASE COUNT          770 a         1851 c         1840 g          862 t
ORIGIN      
        1 tccgaccgcc gcgcgcgcgt ggagcgcgcc acccgcgaga cgcagatcag cgtcgacatc
       61 gacctcgacg gtaccggccg cgcctccatc gcgacccccc tgcccttcct ctcgcacatg
      121 ctcgagcaga tcgcgcggca cgggagcatc gatctttcgg ttttcgccga aggcgacgtt
      181 gagatcgacg gacatcacac gaccgaagac atcggtatcg tgctcggcaa ggccgtgctc
      241 gacgcgctcg gcgaccggcg cggcattcgg cgctacgggt cggccacgtt gccgatggac
      301 gaggcgctcg tgacggcggc gctggatctg tccgggcgtc cgttcttcgt gtggcgcgtc
      361 gacttaccga aggcaaagct cggcaattgg gacgtcgagc tcgccgaggt cttcttcgaa
      421 gcgttcgcgc ggacggcgca agcgaacctc cacctgcgca agcacgaggg ctcgaacctg
      481 caccacatca tcgagatctc gttcaaggcg ttcgcccgcg cgctgcgtga ggcggcgagc
      541 atcgatccgc gctcccccga cgtgccctcc accaaaggaa tgctcgattg actcaaacag
      601 ccgtcgtcgt cgatatcggc atcggcaatc tgcgctcggt cgccaaagcg ctcgagatcg
      661 caggtgaagg gcgtgtcacg gtggtccgct ctcacgatcc cgacgtggtc cggcgcgccg
      721 accgcgtggt cgtccccggt cagggcggct tcgcagcgtg cgccgaaggg ctcgcgggtg
      781 gtctcgacca agcgcttatc gaagccgtga agagcggcgt gccctatctc ggtatctgcc
      841 tggggctgca agtactcttc gagggcagcg aggaggctcc cggcgttcca gggttcggct
      901 ggatgcgggg tcaggtgaga aagctcgccg gtgggccggg catcaagatc ccgcacatgg
      961 gctggaatca gctggagctt gcggacggcg gacatgccgg cttggaagcg gcgggcggac
     1021 aaggcgcctg ggtgtacttc gtgcactcgt accacgcggt tccggaagag ccgggcgttc
     1081 tccgcgcgag cgtgagttac gggtcgaacc gcgtgacggc cgcggtttcg cgcgacaacg
     1141 tgctcggcac gcaattccac cctgaaaaga gtcaagcggc ggggcttgcg ctccttgccg
     1201 cctttttgcg acgctgaagg catcccgatg gaagtcattc cggccctcga tctgctcgac
     1261 ggcaaggcgg tccgcttgcg ccaaggccgt tacgacgagg tgaccgtcta tgacgatcag
     1321 ccgcatgtcg tggcggccga gtggagcggg cgcgtgcggc gcgtgcacgt cgtcgacctc
     1381 gacggcgcca agcagggcac gcccgtgcag cgcgtgctcg tgcgcaaggt ggtcgcctcg
     1441 ttcggcgcgg gcgtgcaggt cggtgggggc gtgcgttcga tggccgctat cgatcaatac
     1501 ttcgagctcg gcgtggatcg ggtcgtgctc ggcacggcgg cgattcgcga tcccgagctc
     1561 gtgcgcaccg cggccgaggc ctacccaggg cgcatcatcg tcgcggtgga cgcgcgcaac
     1621 gggaacgtcg cgaccgacgg ctggctcgac caatccgaac gccgggcgct cgacgtcgtg
     1681 cgcgagctct ccgggctcgg cctcgccgcg gtgctctaca ccgacatcga ccgcgacggc
     1741 acggaagtgg gcccgaacgt ggacgccacg gccctcctcg ccaaggaggg cggcgtgccc
     1801 gtgatcgcga gcggcggagt cggcaaactc gagcacctgc gagcgctcgc gcaggcgggc
     1861 tccggaatcg tcggcgccat cgtcggccgc gccctgcacg agcaccgctt ttcgctggag
     1921 gaagcggtcg ccgccgcgag cgaacgcgcc gctcatggct gagcgcggca tccacgatcc
     1981 gacggaggcg ctctctcgcg cgtccgtctt tccgacgcac agcgtgccgg aggcccccgg
     2041 cgtgcccgag tccgagcacc cggcgccctc gagcgccttc aacggcgagg attttctctt
     2101 ccacctctac cgtggcagcg agctcctgca ggacaactgc gtgcccgagg cgaaggagga
     2161 gctcgagcga gcgctgcgct ttcaaccgag cgacgccgca ggtcaagggt tgctcgggat
     2221 cgtctacttc cggctcggca tgtatccgcg tgccatcggc atctacgaag agctcatccg
     2281 gaactttccg aacgagatat ctcccaaggt aaacctcgcg ctctgttatc tgaagaccgg
     2341 ccagcagcac caagcgcgcg acgtgctcga agaggtgatt caccgcgagc cggatcacaa
     2401 gcgcgcttgg ggttactacg ggctcgcgct cgaacggctc gccgagtacg gcaaggcgca
     2461 ggtcgcgttc cagcacgcgg ggcagcccca actcgcgcgc cgcatgcaaa atcgagccga
     2521 agaaggcgcc gtcgccctcg agcccaccga aggcgagcac gagctcgacg aagtgcggct
     2581 tgccgccgcc gacgccgttc aggagctcga cgcgcaagcg ccgttcatct cggcaccgga
     2641 agaagcgcgc gagctcgagc cggtgcgctc gcgccgctgg cgcgccgtcg aacccggcga
     2701 ggaggtcgtg cccgtggcgc cgcgcgtgtc gcgtccgtcg gccccgccga ctcgcgctgg
     2761 cctcgcaagt ttcggtgcgc cggcagtctc agagccgatg gaactgcctc ccgcgtcgcg
     2821 gcggcccacg gtagagccgc caccgacggt gtcgccgcct cgcgacacgg tcccgggttc
     2881 accctcggcg ctcgtggcgg aagtcgcggt cggcgttccc gacccccgcg agcggctcct
     2941 gatccggggc agtatcgcgg tcgttcgcgt cgaggtcggc ttcgcgatcc gtaacgaagc
     3001 gctccgcgcc gtgcagcccg acgcggcggg gttcatgcgc agcgcgctcc ggcgcaaggt
     3061 gcgcggccgc gcctcggacg agccgttcgg tggccccgcg acgccctgga cgttactcga
     3121 aggcaccggc acggccgtgc tcgcggcgag cggcgagcgc agcgtcgccg gcctcgagct
     3181 cggcggtgag ttcgtttacc tgcgcgaatc gcggcttatg ggcttcgatt cgagcgcgcg
     3241 ttacgaaaac gggcgcctcc cggcgccggc acaagagccg gcgcccatcg tgatcgtgca
     3301 gctttcgggc cgcggtctcg tgctcgtgga gagcgagcgc ccgctccgcg cgctcgtcgt
     3361 gacggccgag caccgcgtca tcgtgcgcag cgaatccgtc gcgggctgga ccgggcgtat
     3421 gctggcgcaa ccacttacgg ccgacgattc cccgacacgc gcgcacggct tcgtgtcgtt
     3481 ttccggcgaa ggcgccgtgc tcctcgacga cgcatgacca cctcgagcat tcctccggcc
     3541 cctcgcccag cgcgcccgac ccgcgccgaa cgccgccgtc gccgccgctc gctgagcgag
     3601 gacgcgctca acgttccgaa cctgctcacg atgggtcgcg tcgcggtcat tccgctcgtg
     3661 atcctgctgc tcgatcgcgc ctcgcccaaa gattgctggt gggccgcgct cgtctactcg
     3721 gcggctgcgc tcaccgatct catcgacggc tggctggcgc gacgcatgca cgtcgtgagc
     3781 gtgctcggaa aattcttgga tccgctcgct gacaagctgc tcgtgatggc ggtgctcatc
     3841 tacctcgtgc cgctcgggcg gatccccgcg tgggcggtga cgctcttgct cgcgcgcgag
     3901 ctgtcggtca cggggctgcg cagcatcgcg agcagtgagg gcgtcgtgat cgccgcgggt
     3961 gatgacggca agagcaagac cgcgctgcag atggtgggcc tgctctgcct gatcctcggt
     4021 tacccctatc acctcacttt ggggcccatc gatctcggcg acgtggatct cgtctacgtc
     4081 ggtcgcgccc tcgtctatgt ctcgctggtg ttctcgatca tgagcgccct ctcctacacg
     4141 cgcctcttcg ccgaggccgt ggaggccaaa aaccagcgtg gcgcgccgta gcactgctgc
     4201 gccagtcttt ggccgggggc agatccgcga ccgaaatcag ccaggattgc tcgcgccgcg
     4261 cgcgtggtgg tagaagccgg ctccgcatgt tccattcggc ccttcggatc ttcgcgcgcg
     4321 gcgtgtgcct gctcgcgacc atcgctgttt tctcgacgag ttgctcgcgc caacccgaag
     4381 gggaacgctg cgattacgac tgggccgggc cgacgcaaga ctgtgactcc ggcttggtct
     4441 gcactccgtg cggcaacctg cagggcagtc ccgtcgaccg ctgctgccgc agcgacaaca
     4501 cctacacgga cccccgctgt gccccggcgg cggcgcccaa ccaaatcagc tgcaacacgc
     4561 gcaaagagcc cgactcgaac acgggcggca gcacgagcgg ttcggccggt agcggtacgg
     4621 gcggctccag cgctggcaag gccggcgcgg ccacgacggg cggctcggcc gggactgcgg
     4681 gctccggcga gatgccgatc tccggcaacg ccggcgaagc gaccgccggc agcggaacct
     4741 gatccatgcc ctcgctcgcg gcgctcggtg acctcggcga gaacgcggtg ctgctcgcgc
     4801 tcgtggtgtc actgcccgtc attggcgtcg ccgcgctcgt gggcgctctc gtgtcggctt
     4861 tgcaagccgc gacccagctg caggacgcga cgctgtcgca cctgccgcgg tttctcgccg
     4921 tcgcgctcgc gctcgtcgtg atggggccgt ggatgggcgc tgaaatcgcc aaattcgcgc
     4981 tcgaagtgtt cgcggcacgc tgagcgatgc gagcgtgcgt gctcgcgcca agcgacctgc
     5041 ctcgctcccg aggtaaacgc gtgacgctcg gcgggcgcgt cctcgtcggt gaacccggac
     5101 gcttggtggt cgcggatgcg tttcagcgcg tcaccgtgac gggcgaggga ctcgtcgccg
     5161 agcccggtga gctcgtcgtc gtcagggggc ggctcgcgcg cggcgcgctc gtggagtcga
     5221 agctcgtcga gcgcttgcag gcgccgttcc cgcgcggaga cggcatgctc cagcgcttct
     5281 gcttcgaggg taccgcgacg cgtcttgcgg cccgggcgcg cgt
//
LOCUS       DATIML010000645         3864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_132212, whole genome shotgun sequence.
ACCESSION   DATIML010000645 DATIML010000000
VERSION     DATIML010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132212"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..989
                     /locus_tag="VLJ38_11090"
     CDS             <1..989
                     /locus_tag="VLJ38_11090"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSU40110.1"
                     /translation="RFVGAQPKNLVFIQNTTVGVNTVLASVAFRPDDEVLITSHGYNA
                     CNNAARYWAERQGARVTVANVQVPVADPGEVVGAVLGAVTPRTRVAIVDHVTSPTGMV
                     FPVAELAQRLRERGVLSLIDGAHAPGMLPLDLGALDADYYVGNLHKWCCTPKGSAILV
                     ARREHQATLRPLVVSHGANTTRPERSKFWLEFDWIGTIDPSAFLAAPRALEFLAGLLP
                     GGIAGLQEHNHDLACRARRTLLDAVGGTPLCPESMLGSLASVALPDAPQAPGHESSPF
                     SEPLYAELVARGFQVLAAFWPAAPRRFLRVTAQIYNEASQYERLAAAVKELL"
     gene            1108..2157
                     /locus_tag="VLJ38_11095"
     CDS             1108..2157
                     /locus_tag="VLJ38_11095"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSU40111.1"
                     /translation="MSNPTLAGIPYAASVGAALTRSTEVLRYEPEPFGLMSARVAVSE
                     LWRERGLAVAPERVALTASTSEAYAFVFKLLCDPGDEVLVPAPSYPLLEHLGALENVR
                     LVQYELGHDGAWFIDVAEVARRVSSRTRAVVLVSPNNPTGTYLKHDELSRLSALGLPV
                     ISDEVFGDYALVDDARRARSVLDADEGLVIALDGLSKAAALPQMKLAWLTLGGAAPLV
                     DEALARLELVLDAFLSPSTPVQRALPELLATRGVARDAILERVRQNLAVLARKCAGSA
                     VTQLPVEGGWYAVVRVPATATDEAWALRLLDAGVLVQPGYFFDFGEVPHLVVSLLTEP
                     APFAQGVERLVAVAG"
     gene            complement(2161..2988)
                     /locus_tag="VLJ38_11100"
     CDS             complement(2161..2988)
                     /locus_tag="VLJ38_11100"
                     /inference="COORDINATES: protein motif:HMM:TIGR03901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MYXO-CTERM sorting domain-containing protein"
                     /protein_id="HSU40112.1"
                     /translation="MGARSEVMLLSNRSHARRTLPALVMLVLTLICATALAAGRIDWK
                     SKTFKERSDKSWMLELALYLPRAPDVAYVPMKFEFQPEVYYERSLVDGHDGPIDRKVP
                     LENRQPLIESVDVGFMDSATTKIESRTRFSFKVKRDLGYEAGEYKVTVRDTRNGQVIG
                     SPTTIIFDGQNEIIDRRAMVFSGEKKKKPEEKKPAEEKKADSADSGDADKSTSDGDKD
                     DAKSEGDNSGGDKPPPVEKKSGGCGCRVSGTQAMGLEWALPLALGAVFAARRRKRAA"
     gene            complement(3052..3486)
                     /locus_tag="VLJ38_11105"
     CDS             complement(3052..3486)
                     /locus_tag="VLJ38_11105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40113.1"
                     /translation="MPKVYLLAVGSGSSVDQHSNNITLFNLVEQLNFPRQSWPPPGAI
                     LPLEMHAYLRLDAFELNQKFELRFVLVGDNGLETPTNAFSHRSATPRYRTRTFGLPAP
                     PAPGGYELRVEFRGHEGAIWQRDPMTWPLLVLQSEPRPSVTH"
BASE COUNT          550 a         1316 c         1313 g          685 t
ORIGIN      
        1 cccgtttcgt gggcgcccag ccgaaaaacc tcgtgttcat tcagaacacg accgtgggcg
       61 tcaataccgt cctcgcgtcc gtcgcctttc gcccggacga cgaagtcctc atcacgagcc
      121 acggctacaa cgcgtgcaac aacgccgcgc gctactgggc cgaacgtcag ggcgcgcgcg
      181 tcacggtcgc gaacgtccaa gtgcccgtcg ccgatcccgg cgaggtggtc ggagccgttc
      241 tcggcgcggt cacgccgcgc acgcgcgttg cgatcgtcga tcacgtgacg agcccgacgg
      301 gcatggtctt tcccgttgcc gagctcgcgc agcggctgcg cgagcgtggt gtcctctcgc
      361 tcatcgacgg cgcgcatgct cccggcatgt tgccgctcga cctcggcgcg ctcgacgccg
      421 actactacgt cggtaacctc cacaagtggt gctgcacgcc caagggcagc gccatcctcg
      481 tggcgcggcg cgagcaccaa gcgaccttgc ggccgctcgt ggtcagtcac ggcgccaaca
      541 cgacgcgacc cgagcgctcc aaattttggc tcgaattcga ttggatcggc accatcgatc
      601 cgtctgcgtt cctcgcggcc ccgcgcgcgc tcgagtttct cgcggggctc ttgccgggcg
      661 gcattgccgg gcttcaagag cacaatcacg atttggcgtg ccgcgcgcgt cgcaccttgc
      721 tcgacgccgt gggcggcacg ccgctctgcc ccgagagcat gctcggctcg ctcgcgagcg
      781 tggcgctgcc ggacgcgccg caggcccccg gccacgagtc ctcgccgttc agcgagccac
      841 tgtatgcgga gctcgtcgcg cgcggcttcc aagtgctcgc tgcgttctgg cccgcggctc
      901 cgcgccgctt tttgcgggtg accgcgcaga tctacaacga ggcgtcgcag tacgagcgct
      961 tggcggccgc ggtgaaagag ctgctgtagc cgtccagcga ggaaacgagt gttttcggaa
     1021 cgcagtgccc gggagcggtc gcccaatcga ctgagtgccg ccgtcgccga gcggcgagcg
     1081 gccggcgctg ctctcgtcga tttgacggtg tcgaacccga cgcttgccgg gatcccctac
     1141 gccgcgagtg tcggcgccgc gctgacgcgc tcgacggagg tgctgcgcta cgagccggag
     1201 ccgttcgggc tcatgagcgc ccgtgtggcg gtgagtgagc tctggcgcga gcgggggctc
     1261 gcggtggcgc cggagcgcgt cgcgctgacg gcgagcacga gcgaggcgta cgccttcgtg
     1321 ttcaagctcc tgtgcgatcc gggcgacgag gtgctcgtgc ccgcgccgag ctacccgctg
     1381 ctcgagcacc tcggcgcgct cgaaaacgtg cgcctcgttc agtacgagct cggccacgac
     1441 ggcgcgtggt tcatcgacgt ggcggaggtc gcgcggcgcg tgagctcgcg gacgcgcgcc
     1501 gtggtgctcg tgagtccgaa caacccgacc ggaacctacc tgaagcacga cgagctctcg
     1561 cgcctgtcgg cgctcggttt gcccgtcatc tcggacgagg tgttcggtga ctacgcgctc
     1621 gtggacgacg cgcggcgcgc gcgctccgtg ctcgacgccg acgaggggct cgtgatcgcg
     1681 ctcgacgggc tctcgaaagc cgcggcgctg ccgcagatga agctcgcctg gctcacgctc
     1741 ggcggtgcgg cgcctctcgt ggacgaggcg ctcgcgcggc tcgagctcgt gctcgacgcg
     1801 tttctgtcac cgagcacgcc ggtgcagcgg gcgctcccgg agctcctcgc cacgcgcggc
     1861 gtggcgcgcg acgcgatcct cgagcgggtg cggcagaatc tcgccgtgct cgcgcgaaag
     1921 tgcgcgggct ccgccgtgac gcagttaccc gtcgagggcg gctggtacgc cgtcgtgcgt
     1981 gttcccgcga cggcgacgga cgaagcctgg gcgctccggc tgctcgacgc gggcgtgctc
     2041 gtgcagccgg ggtacttctt cgatttcggc gaggtgccgc acctcgtcgt gagtctgctc
     2101 accgagccgg caccgttcgc gcagggtgtc gaacggctcg tcgccgtcgc cggctgagac
     2161 tcacgccgcg cgcttgcggc gccgcgcggc aaacacggcg ccgagcgcga gcggtagcgc
     2221 ccactcgagc cccatcgcct gcgtcccact cacgcgacag ccgcagccgc cgctcttctt
     2281 ctcgacgggc ggcggcttat caccaccgct gttgtcgcct tcgctcttgg cgtcgtcctt
     2341 gtcgccgtcg ctcgtcgact tgtccgcgtc accgctgtcg gcgctgtcgg ccttcttctc
     2401 ctcggccggc ttcttctctt cgggcttctt cttcttttcg ccggaaaaca ccatggcgcg
     2461 gcgatcgatg atctcgttct ggccgtcgaa aataatggtc gtcgggctgc cgatgacctg
     2521 gccgttgcgc gtgtcccgca ccgtcacctt gtactcgccg gcctcgtaac cgaggtcgcg
     2581 cttgaccttg aagctgaagc gcgtgcggct ttcgatcttg gtcgtggccg aatccatgaa
     2641 gcccacgtcg acgctttcga tgagcggctg gcggttctcg agcgggacct tgcgatcgat
     2701 ggggccgtcg tggccgtcga ccagggagcg ctcgtagtaa acctcgggct ggaactcgaa
     2761 tttcatcggc acgtaggcga cgtccggagc gcgcggcagg taaagcgcga gctcgagcat
     2821 ccaggatttg tcgctgcgct ccttgaaggt cttgctcttc cagtcgatgc gaccggcggc
     2881 gagcgccgtg gcacagatca acgtgaggac gagcatgacg agggcgggca acgtccggcg
     2941 agcgtgggag cgattcgaca agagcatgac ctccgagcgg gcgcccaccc tatcgggtct
     3001 tctgccgcgt gccaagcgcg gcccctcgtg cgggccgacc gtggtgcgcg ctcagtgcgt
     3061 gacgctcggt cgtggttcgc tctgcagcac gaggagcggc caagtcatcg ggtcacgctg
     3121 ccagatggcg ccttcgtggc cgcgaaactc gacgcgcagc tcataaccgc cgggcgcggg
     3181 cggcgccggc agtccgaacg tgcgcgtgcg gtagcggggc gttgcggaac gatgcgagaa
     3241 ggcgttcgtc ggcgtctcga gcccgttgtc gcccacgagc acgaagcgaa gctcgaattt
     3301 ttgattgagc tcgaaagcgt ccaggcgcag gtacgcgtgc atttcgagcg gcaagatggc
     3361 gccgggcggc ggccacgact ggcgcgggaa gttcagctgc tcgaccagat tgaacagcgt
     3421 gatgttattc gaatgctgat cgacgctcga tccgctgcca accgcgagca aatagacctt
     3481 cggcatcctt gggggcccta gcactacttc ggcagtctcg gcatggccag atcacgatcg
     3541 gcagatgtgg cgatcaccta cgtaaataaa ccggcgcggc cggtggacgg ccgtccttcc
     3601 ggacaccaaa gtcggcacct tttctcgttc gccatctggg agatggcttc agctggtggc
     3661 acgccgtccg tataatcgtc ggatcgcctc gcgacgttgg cgagctcatt tacggcgttc
     3721 caccggcctc gccggttctt tacgtgggtc atgccgaccc aggtcgctcg tgatctgctc
     3781 ctaccaaaga ctagcgaagt actcgcagca tgcaccggcg cgtgcgacta acccgcggcg
     3841 agtcgcacga ccgtgagcgt gccg
//
LOCUS       DATIML010000646         1708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1867778, whole genome shotgun sequence.
ACCESSION   DATIML010000646 DATIML010000000
VERSION     DATIML010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1867778"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1708
                     /locus_tag="VLJ38_11110"
     CDS             <1..>1708
                     /locus_tag="VLJ38_11110"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU40114.1"
                     /translation="RDAELASLREAYGDTIAGRAVVVVVDGESGIGKTALCQTFLDEM
                     RLERRAAVLQGRCYERESLPFKAFDPLIDELTRYLRGLAPAQAAALMPRDVFALAKLF
                     PVLGRVAPIADAPARSGLAPAELRRRAFDALGELFARIRDRRPLVAYIDDLQWMDADS
                     AALLRHLLISREPVPALLIVSHRTDDGSRSPLLQAVLAAAASNRLLALRRVRLGPLPL
                     ERTEELASSWLGEAAAEPELAQAIARESRGSPFFVLELARFVRGAPPQSHAELSLAAV
                     VSAQLAALSSAARTLLEALALAGRPLPFESMLAVAAASHQDVDDLRAAQFVRGNESGG
                     QRLIDCYHDRIRENVSAGLSVARTRLLYGALAQALEADPKADPELVSRCLEGAGDAEA
                     AARYASIAADAALAAMAFEHAAACYRKAIALGTADGTSRLALLTQLGVALENAGRGPE
                     AADAYQQAALLSAGDTRVDLRRRAAEQLLATGHVAEGTELLERVCEELGLSLPATTSA
                     AFLSLLWTRSLLRLRSLDQSLPEPANSGAQAAVVRGARARSSPGATGQRLETARSIVT
                     GLI"
BASE COUNT          230 a          630 c          586 g          262 t
ORIGIN      
        1 ccgtgacgcc gagctcgcga gcttacggga agcgtacggc gacaccatcg ccggccgtgc
       61 cgtcgtcgtc gtcgtcgatg gcgagagcgg catcggcaag acggcgctct gccaaacgtt
      121 cctggatgaa atgcgcctcg agcgtcgggc cgccgtgctc caagggcgtt gttacgagcg
      181 cgagagcctg ccgttcaagg cgttcgatcc gctgattgac gagctgactc gctacttgcg
      241 cggcttggct ccggcccagg ctgcggcgct catgccgcgc gacgtcttcg cgctcgccaa
      301 gttgttcccg gtcctcgggc gcgtcgcacc gatcgccgat gcccccgccc gcagcggtct
      361 cgctcccgcg gagctcaggc ggcgcgcctt cgacgcgctc ggcgagctct tcgcacgcat
      421 ccgcgatcga cggccgctcg tcgcgtacat cgacgatctg caatggatgg acgcggattc
      481 tgccgcgctg ctgcggcatc tgctgatcag ccgcgagccc gtacccgcgc tgctgatcgt
      541 cagtcaccgc accgacgatg gcagtcgcag tccgctgctg caggcggtgc tcgcagccgc
      601 cgcatcgaat cgactgctcg cgctccggcg cgtgcggctc gggccgctgc cgctcgagcg
      661 tacggaggag ctcgcgagct cttggctcgg cgaggccgcc gcggagcccg agctcgcgca
      721 ggccatcgcg agggagtcac gcgggagccc gtttttcgtc ctcgagctcg ctcgcttcgt
      781 gcgcggggca ccgccgcaaa gccacgccga gctctcgctc gccgcggtgg tttcggcgca
      841 actcgccgcc ctgtcgagcg cagcccggac cctgctcgaa gcgctggctc tcgcgggccg
      901 tccgctgccg ttcgagtcga tgctcgccgt cgccgcggcc agccatcagg acgtcgatga
      961 cctgcgggcc gctcagttcg tgcgcggcaa cgagtcgggc ggccaacgtc tcatcgactg
     1021 ctatcacgat cgcatccgag agaacgtgag cgctggactc tcggtcgcac gcacccgcct
     1081 gctctacggc gcgctcgcgc aggcgctcga agcggaccca aaagccgatc ccgagctcgt
     1141 cagccgctgt ttggaagggg cgggcgacgc cgaggccgcg gcgcggtatg ccagcatcgc
     1201 cgccgacgcg gcgctcgcgg cgatggcctt cgagcacgcg gccgcctgct accgcaaggc
     1261 aatcgcgctc ggcactgcgg acgggacgag ccgcttggcg ctcctcacgc agctcggggt
     1321 cgcgctcgag aacgccgggc gtggcccgga agcagcggac gcctaccagc aagcggcgct
     1381 gctctccgca ggcgacacgc gtgtggatct gcgccggcgc gccgcggagc aactgctcgc
     1441 gaccgggcac gtcgcggagg gcaccgagct cctcgagcgt gtgtgcgagg agctcgggct
     1501 gagcttaccc gcgacgacgt cagccgcgtt cctgtcactg ctctggactc gatccctgtt
     1561 gcggctgcgc tcgctcgacc aaagcttgcc cgaaccggcg aacagcggcg cgcaagcggc
     1621 tgtcgtccgc ggagctcgcg ctcgctcgtc gccgggcgcc acgggccagc gcctcgagac
     1681 cgcacgatcc atcgtcaccg gactcatc
//
LOCUS       DATIML010000647         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4756307, whole genome shotgun sequence.
ACCESSION   DATIML010000647 DATIML010000000
VERSION     DATIML010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4756307"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VLJ38_11115"
     CDS             complement(<1..300)
                     /locus_tag="VLJ38_11115"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the formation of L-tryptophan from
                     L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived
                     by automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HSU40115.1"
                     /translation="MSTAERVGYYGEFGGRFVAETLVPALEELERAFETHVKSASFQN
                     EWRGLLASYVGRPTPIYRADRLAHELGLEPGILGELWLKREDLCHTGAHKINNALG"
     gene            complement(297..974)
                     /locus_tag="VLJ38_11120"
     CDS             complement(297..974)
                     /locus_tag="VLJ38_11120"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HSU40116.1"
                     /translation="MSLWIKICGVTTVGDAELAVRAGADAVGVNFVAGSKRRVDEETA
                     RDIVRAVGARAEVVGVVADWPADALVALRARLGLGSVQLHGSESPEALARLLPGAYRA
                     ARIATSADVDAARRFGGTRLLVDAKVAGTLGGTGHTFDWALVAALARERALVVAGGLT
                     PENVGAAVDAVRPYGVDTASGVEGDDPRRKDADKVARFVDAARRAARAAGLDSRASVD
                     YEPGRNP"
BASE COUNT          257 a          582 c          537 g          240 t
ORIGIN      
        1 cccgagcgcg ttgttgatct tgtgcgcgcc cgtgtgacag agatcctcgc gtttgagcca
       61 gagctcgccg agaatgcccg gctcgaggcc gagctcgtgc gcgagccggt cggcgcgata
      121 gatcggcgtg ggccgaccga cgtaactcgc gagcaggccg cgccactcat tttgaaacga
      181 cgcgctcttc acgtgcgttt cgaacgcgcg ttcgagctcc tcgagagcgg ggacgagcgt
      241 ctccgccacg aagcgcccgc cgaattcgcc gtaatacccg actcgctctg cggtgctcat
      301 gggttccgtc ccggctcgta atccacgctt gctctgctgt cgagcccggc cgcgcgcgcc
      361 gcccgccgcg cggcgtcgac gaaacgcgcg accttgtcgg cgtctttcct gcgcggatcg
      421 tcgccctcga cgccgctcgc cgtatcgaca ccatacgggc gcacggcgtc taccgctgct
      481 cccacgttct ccggcgtgag cccgccggcg acgacgagcg cccgctcgcg cgcgagcgcc
      541 gccacgagcg cccaatcgaa cgtgtgcccc gtgccgccga gcgtccccgc gacctttgca
      601 tcgacgagca gccgcgtgcc cccgaagcgc cgcgccgcgt ccacgtcggc gctcgtcgcg
      661 atccgcgccg ctcgatacgc gcccggcaac aagcgcgcga gcgcttccgg cgactcactg
      721 ccatgcagct gcacgctgcc gagaccgagc cgcgcgcgca gggcaacgag cgcgtccgcc
      781 ggccaatcgg cgaccacgcc caccacctcc gcgcgagctc ccactgcccg cacgatgtct
      841 cgcgccgtct cctcatcgac gcgccgcttc gagcccgcca cgaagttcac tccaacggcg
      901 tccgcgccgg cgcgcaccgc aagctccgca tcaccgacgg tcgtgacgcc gcagatcttg
      961 atccagagcg acatggagac aggcgtcata gcactcgctt gcgctaccgt gaaaatggca
     1021 gagagagctg gggttgcccc ccatcgtcgc tcctcgcgcc tgcggcgctg cggggcgccg
     1081 gttccccccc aatcgcgacg cgaagacgcg tcgctcaggg gggaacgccg gcgcacgagg
     1141 tgacgggcgg tgcgcgattg cccgtcggaa tgcttatacc ggtgtggtcg tgaggcgcgg
     1201 atcgccggtt cgacgacggc tgcttggttt gcgccctgcg cacgctcggc cggaacgccg
     1261 gctcgctagt gccggaagtc ggcgtatgcg agtgatgccc tcgggaccgc tgcgtgaagc
     1321 ggagattgcg cctgatgaaa cggcgcgcgc gagacgagac cacgacgaag accgacggag
     1381 gttggcggga cgaatggacg gcgggggaac gctcgaggca gcgctggacg cacgccgctg
     1441 aagagcccat caaagagatc taggtgtgca cgctagctcg ttgagagggt caagatctgc
     1501 gcctcacgag ctcgagatcg aagcgacgca tgcgggaagt tccgtgccac ctaagaaccc
     1561 cgtggccacg ccggcgacgt atcgtaggtg agcttcgtga cgccgcagga attgct
//
LOCUS       DATIML010000648         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5334136, whole genome shotgun sequence.
ACCESSION   DATIML010000648 DATIML010000000
VERSION     DATIML010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5334136"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..1233)
                     /locus_tag="VLJ38_11125"
     CDS             complement(232..1233)
                     /locus_tag="VLJ38_11125"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSU40117.1"
                     /translation="MLPLLLLGSCVGAGNANSDEPKAVADTPVCDGQTFGDLERSETV
                     SDGCKAELSAYLPASSDNSTGRLAMLGNEARGDGSLRVFLAGLDAAGAPLSAAAYVGA
                     HVSVRGDAGKFVESGAVLRATGFGALGEGALSLEFVNDYSASMNLADLRVVERIQHDL
                     VAALPPIYEGEVTLFSDEVRVKQAFTTDRNALLAGVQRDEHFERKLTALYDGMGNGLD
                     SLTARSRPARVLMVATDGFENASVAYKKSDIVKGIADDGIFVIMLGALFAKESELASL
                     AGPRGVYFYTPLYADLDDRLNAWMGALAHGAALDIPAGTAQKRPLRLEVAGETVEID"
     gene            complement(1534..1911)
                     /locus_tag="VLJ38_11130"
     CDS             complement(1534..1911)
                     /locus_tag="VLJ38_11130"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSU40118.1"
                     /translation="MQNSDPPVLGMVSMFSPTYLCARAAEAAGLTGDDVTIVGFDFEP
                     ETLTYMQSGMIKATHAQRQYYMGYLVPYVLYSMKALGAERTLDILSPQMTDTVRFNAG
                     IDVVSAEKVDAYNAFLDSLGITG"
BASE COUNT          358 a          668 c          667 g          349 t
ORIGIN      
        1 cggccccgga atacaacgaa cccttcagca acgactcgct catggctgtg tctctccctg
       61 ttgaggcccc gcaccacacc cgacgtgggg cgacgtgaag agactccagt ccttgcgccg
      121 agtcaaccga cgctacgaca cgtgaatgcc cgcgccgtgg cgacttcttc tcgtttttga
      181 cgcccgtgtg cggagagggc gacgggcgcg caccgtaacg ggcgcgcgag ctcagtcgat
      241 ttcgacggtt tcgcccgcga cctcgagacg cagcgggcgc ttttgagccg ttccggcagg
      301 aatgtcgagc gccgcaccgt gggcgagcgc gcccatccaa gcgttcagcc gatcgtcgag
      361 gtccgcgtag agcggcgtgt aaaaatagac gccgcgcggt ccggcgagcg acgcgagctc
      421 gctttctttc gcgaagagcg ccccgagcat gatcacgaag atgccgtcgt ctgcgatgcc
      481 tttgacgata tcgctcttct tgtatgcgac cgacgcattt tcgaacccgt cggtcgcgac
      541 catcagcacg cgggcagggc ggctccgcgc ggtcaagctg tcgaggccgt tgcccatgcc
      601 gtcgtaaagc gccgtgagtt tgcgctcgaa gtgctcgtcg cgttgcacgc cggcgagcag
      661 cgcgttgcga tcggtcgtga aagcttgttt cacccgcact tcgtcggaaa agagcgtgac
      721 ctcaccctcg taaatcggcg ggagcgcggc aacgagatcg tgctgaatgc gctcgacgac
      781 gcgcaagtcc gccagattca tgctcgcgga gtagtcgttc acgaactcga gcgagagcgc
      841 accttcgccg agcgcgccga acccggtcgc acgcagcacg gctccgctct cgacgaactt
      901 gccggcgtcg ccgcgcaccg acacgtgcgc tcccacatac gccgccgcgg agagcggcgc
      961 gcctgcggcg tccagacccg caaggaacac gcgcagcgag ccgtcgcctc ttgcttcgtt
     1021 gccgagcatt gcgagccggc ccgtggaatt gtcggagctt gcaggcaggt atgcgctgag
     1081 ctcggctttg cagccgtccg agaccgtctc ggagcgctcg aggtccccga acgtctgtcc
     1141 atcgcagacc ggcgtgtcgg cgacggcctt cggctcgtcg ctgttcgcgt tcccggcacc
     1201 gacgcaactg ccgagcaaaa gcagcggaag caccgcgaaa cgggacgcaa ggcggagcgg
     1261 cagcctgaaa gacacgatcg gcccgctgtc cactcagcaa cgcgcgtgcc acacccgagc
     1321 cggcgtaaag ctcgctgttt cctgccgagc cgcgcgcggg gccgcgacat tgatgtcgcg
     1381 cacgtccgct gttattgaag agtcgctcgt cgaacgcgcg gagcgtcgcg tcgaaccgac
     1441 ttggtctcgc ttccccaaac gccccacaaa agaacgcgcc cgccgcgagc gtgtgctcgg
     1501 gcgggcgcgc gaccagcgca acgagcggga actttagcca gtgatgccga gtgaatcgag
     1561 gaatgcgttg taggcgtcga ccttttcggc gctcacgacg tcgatgccgg cattgaaacg
     1621 cacggtgtcg gtcatctgcg gcgagaggat gtcgagcgtg cgctccgcgc cgagcgcctt
     1681 catcgagtaa agaacgtacg gcacgagata gcccatgtag tactggcgct gcgcgtgtgt
     1741 cgctttgatc atgcccgact gcatgtacgt gagcgtttcg ggctcgaaat cgaagccgac
     1801 gatggtcacg tcgtcaccgg tgagaccggc ggcctccgcg gcgcgcgcac agaggtacgt
     1861 cggcgaaaac atgctgacca taccgagcac gggcggatcg gagttctgca agggtcggtc
     1921 atgtcgacca cgtcttgcgc ttgctcgtcg tcggtccagt cggtcgtgtg cacgacgacc
     1981 gtgtagccgg cggattgtag cgaatcgacg gcgccctgcg tgcggttgat gccgtcggac
     2041 ca
//
LOCUS       DATIML010000649         2571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_133283, whole genome shotgun sequence.
ACCESSION   DATIML010000649 DATIML010000000
VERSION     DATIML010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133283"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1400
                     /locus_tag="VLJ38_11135"
     CDS             <1..1400
                     /locus_tag="VLJ38_11135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40119.1"
                     /translation="LLTGRPPFEGESSHAILEQVKHEPVPDPRKYDRSIERDLAGLCL
                     RCLEKEPEHRYRSAGELADTLRRFLDGEPVGRVSAFERALRWRRRNPLLAAVATMLLA
                     FLLIMTPSALSLMRGEEAHKRAEIVADNQNAAQLFAYAVLGHLRALSDAVARAAAEEP
                     LARGLERGDAPALQQFVDAKLAEYEDAAQGLKLDDNSPFDMWCLLDNEGTLVADSRLS
                     VVARRQKNVATDYEWRDYFIGARELASRGSIATYVSPAFKSENDDRHKFAISTPVYSR
                     DRSHRPLGVLVAAVAAQANLGSLILKDTHAVAVLVAPHGRERHDPQPKPSFLILRHPA
                     YSRYGEAVPTDGPELRRLASVQPATLLGRERWGLPRRDLAANRDYRDPVAERYSAYVG
                     HWIAAFAPVGNTGFVVVVQTLETDALKPIRTFGVGLAKAGGLSLSPGLLLLAAGVARS
                     RRGRVWRASQAKQHD"
     gene            complement(1498..1917)
                     /locus_tag="VLJ38_11140"
     CDS             complement(1498..1917)
                     /locus_tag="VLJ38_11140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40120.1"
                     /translation="MVSRSNTVQAADEAGFVDATVRAVEEELHARGVEGIVRGAGEHP
                     PAPRLELTFVSWQPGRGAVTHLTESERKQAFIAILVKARAEYDRVTLEGRVEGADLAS
                     SEGTHEAAEAAGRSIGRALADADYMPKAPQSLATSLP"
     gene            complement(2063..>2571)
                     /locus_tag="VLJ38_11145"
     CDS             complement(2063..>2571)
                     /locus_tag="VLJ38_11145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40121.1"
                     /translation="GGNAATGGSAGKGGTSTGGSSGAGNAAIGGSSARAGDGADGGAA
                     GDGGISGAAGSAADGGTSPGGGGSDGGGTAGAAGAPSGARSCEKDCTDLANTECAGPD
                     FDVAACIPDCEQAAQDAIDAASQIGCLDQFLALDACRADDPVCTHPNPNECVAENAAY
                     IQCLEDAT"
BASE COUNT          400 a          899 c          847 g          425 t
ORIGIN      
        1 acctgctcac cggtcggcct ccgttcgagg gcgagagcag ccacgccatc ctcgaacagg
       61 tcaagcacga gccagtgccc gatccgcgca agtacgatcg cagcatcgag cgagacctcg
      121 cggggctgtg cttgcgttgt ctcgaaaagg agcccgagca ccgctatcgc tcggcgggcg
      181 agctcgccga cacgttgcgc cgcttcctcg acggcgagcc cgtggggcgg gtgagcgcgt
      241 tcgagcgcgc gctgcgttgg cgccgccgta acccgttgtt ggcggccgtt gcgacgatgc
      301 tgctcgcgtt cttgctgatc atgacgccga gcgcgctgtc gctgatgcgc ggcgaggagg
      361 cccacaagcg cgccgagatc gtcgccgaca accaaaatgc agcgcagctg ttcgcctatg
      421 ccgtgctcgg ccatcttcgc gccctgagcg atgcggtcgc tcgcgcagca gcggaggagc
      481 cgctcgcgcg cgggctcgag cgaggcgacg cgccagccct ccagcagttc gtcgatgcga
      541 agctcgccga gtacgaggat gccgcccagg gtctcaagct cgacgacaac tcgcccttcg
      601 acatgtggtg cctgctcgac aacgaaggaa cgctcgtggc cgattcgcgg ctgtcggtgg
      661 tcgcccgcag gcagaagaac gtcgcaaccg attacgagtg gcgcgactac ttcatcggcg
      721 cacgcgagct cgccagtagg gggtcgatcg cgacctatgt ctcgccggcg ttcaaatcgg
      781 aaaacgacga ccgacacaaa ttcgccatct cgaccccagt gtactcgcgc gaccgctcgc
      841 atcggccgct cggcgtgctc gtcgccgcgg tggccgccca agcgaacctc ggctcgctta
      901 tcctcaaaga cacgcacgcc gtggcggtgc tggtcgcgcc acacggccgt gagcgccacg
      961 acccgcagcc gaagccgtcc tttctgatcc tcaggcaccc cgcttactca cgctacggag
     1021 aggcggtgcc tacggacggt cccgaattac ggcgactcgc tagcgtgcaa ccggcaacac
     1081 tgctcgggcg ggaacggtgg ggactacctc gccgcgacct ggcggcgaac cgcgactatc
     1141 gtgatcctgt tgcggaacgc tacagcgcct acgtagggca ttggattgcg gcgttcgcgc
     1201 cagtcggcaa cacgggcttc gtcgtcgtgg tgcaaactct cgagactgac gccttgaagc
     1261 cgattcgtac cttcggcgtc gggctcgcca aagcaggcgg cctctcgctg agcccgggct
     1321 tgttgctgct cgcggccggc gtcgctcgca gccgccgcgg ccgcgtttgg cgcgcgagcc
     1381 aggcgaagca gcacgactaa ctttcgtccg gatcgccgat cctgccgcag ctctgcgcgt
     1441 cggcggagat tagcgggtgc caacgctaaa gcaatcgcgc cgaaatcgaa gtgaggctca
     1501 aggcagcgac gtagcgagac tctgcggcgc cttgggcatg tagtcggcgt ccgcgagcgc
     1561 tcgcccgatg gagcgtccgg cggcctcggc cgcctcgtgc gtgccttcac tggacgctag
     1621 gtccgcgcct tcgactcgtc cttcgagcgt gacacggtcg tactcggctc gcgccttcac
     1681 gaggatggcg atgaaggcct gcttgcgctc ggactcggtg aggtgagtga cggcaccgcg
     1741 acccggttgc cagctgacga aggtgagttc caggcgcggc gcgggcgggt gctcgccggc
     1801 gccgcgcacg atgccttcga caccgcgtgc gtgcagttct tcctcgacgg ctcgcaccgt
     1861 cgcgtcgacg aagcccgctt catcggccgc ctgcacggtg ttactccgcg aaaccacgat
     1921 cgaaatcgag cacggcggcc ggtagttcga actacggacg aagtcgtgcc acgttgcata
     1981 gtgcgcgcag ccgagcagca aacagccggc gcacgaaaaa atcaggtcgc gacgcatccg
     2041 cacgccgagc acggcgttca ggttacgtcg cgtcctcgag gcactgaatg taggccgcat
     2101 tttcggcgac acactcgttc ggattcgggt gcgtgcagac ggggtcgtcg gcacggcagg
     2161 cgtcgagtgc caagaactga tcgagacagc cgatttggct ggcggcgtcg atcgcatcct
     2221 gggcggcttg ctcgcagtcg gggatgcacg ctgctacgtc gaaatcggga ccggcacatt
     2281 cggtgtttgc cagatcggtg cagtcttttt cgcacgagcg cgcgccgctc ggcgcgcccg
     2341 ccgcgccggc agtgccgccg ccgtccgagc cgcctccgcc aggcgaggtg cccccatcag
     2401 cggcgctgcc tgccgcaccc gagatcccgc cgtcacctgc cgccccgcca tcggccccgt
     2461 cgcctgctct cgccgagctg cccccgatcg ctgcgttgcc tgcgcccgag ctgcctccgg
     2521 tggaagtgcc ccctttgccc gcgctgcccc ctgtcgccgc gtttccgccc t
//
LOCUS       DATIML010000650         3021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2440975, whole genome shotgun sequence.
ACCESSION   DATIML010000650 DATIML010000000
VERSION     DATIML010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3021
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2440975"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..393
                     /locus_tag="VLJ38_11150"
     CDS             <1..393
                     /locus_tag="VLJ38_11150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40122.1"
                     /translation="LARAMSGVIELLGLKRFLLCTYAGGQRHVRPTVESVGRDVVFHH
                     QAQPFPLEQILPPGFLRGDRPVQLAIEPLEFADEHFGYLVLEGDFKHGLAYLTLRRYL
                     GCTVARMAHGRELRRLYAAEKRRTEVER"
     gene            553..2280
                     /locus_tag="VLJ38_11155"
     CDS             553..2280
                     /locus_tag="VLJ38_11155"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40123.1"
                     /translation="MSQPLFNEISAHSFERPVLRVGRYRILSELGRGGMSNVYLAVAH
                     GPGGVNKLVVLKALLPDLSAEPYALTMFLDEARLAAQLNHPNVVQTYEVGTEGDRHVI
                     VMEYLEGQSLSIVIKRSEQAGNPLPLGLHLRVIVSALEGLHYAHELRAYDGSLLQLVH
                     RDISPQNVFVTYDGQVKVLDFGIAKAASSSTHTATGIVKGKIAYMAPEQTIGDTVDRR
                     ADLFSVGCMLWAAATGRKLWKDTPDVHIMRRVINGDIPTPQSANPACDDELNAIVMRA
                     LAVDPNQRYQTALELQQELEAYCEGLEPAKQKDIARHVATLFADKRAEIKALVERQLA
                     LVGTEETSASGSRGIPVLTTDLKASTGTHPSWSPTKLGETMKSGGSGGSKLWWVAVPL
                     LLGGAGFFFWRSSNSAPSADAHGVPTAPVVRTPEAAPAPTTATIEFKVTPGEAKLFLD
                     DEPLPSNPTSKVLRVDGAIHRLRATADGFNAATAEFTAARDTTLDLDLTPSAAPVVAA
                     TDDDSSASKGRPRGSVRPYGRVRPVAPGTTPTTTEATPPAPAPKVANCDSPFFVDKDG
                     IKKMRPECL"
     gene            complement(2338..>3021)
                     /locus_tag="VLJ38_11160"
     CDS             complement(2338..>3021)
                     /locus_tag="VLJ38_11160"
                     /inference="COORDINATES: protein motif:HMM:NF013895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HSU40124.1"
                     /translation="VDGAGVLLGMITIDDIVDVLTAEQTEDVQKIGGMDPLDVPYFQT
                     TFGGFIRKRGVWLLALFIGEFFTQTALRHYDGTLSAIHGAAYYVPLLISAGGNSGAQS
                     STLVIRGLATGELKLTDWWRIFWREARMGLVLGLGLATVGFFRVLMYKDQHTNFALTV
                     GVALVGIVFAGCTIGSMLPILLKRLRVDPATSSTPFIASLVDVTGILVFVYTAQVIMA
                     DVIAKFEPH"
BASE COUNT          548 a          994 c          986 g          493 t
ORIGIN      
        1 ctcgctcgcg ccatgagcgg cgtgatcgag ctgctcggct tgaaacgatt tttgctctgc
       61 acttacgccg gcgggcaacg ccacgtgcgc ccgaccgtcg aatccgtcgg acgggacgtg
      121 gtcttccatc atcaagcgca accgttcccg ctcgaacaga tcctgccgcc cggctttctg
      181 cgcggtgaca gaccggtgca actcgccatc gaaccgctcg agttcgccga tgaacatttc
      241 ggttatctcg tgctcgaagg tgacttcaag cacggtctcg cctacctcac gctgcgccga
      301 tatctcggct gcacggtcgc gcggatggcg cacggtcgcg agctccgccg tttgtacgca
      361 gccgaaaaac gccgtaccga agtggagcgt tgaactggcc tcgagtttgc cgatcggtcg
      421 aggccggtgc tgcgaagtgc gagccgaacc tacatgaatc gtgccgcgag cgagcgcggg
      481 ccgaggatgt tatgctctcg ggcagagatg gcatcggacg cgagctccaa tggagagccg
      541 acctcgtcga gcgtgagcca accgcttttc aacgagatca gcgcgcacag cttcgagcgg
      601 cccgtgctgc gggtggggcg ttaccgcatt ctttccgagc tcgggcgggg cggcatgtcg
      661 aacgtctatc tggccgtcgc gcacggtccg gggggcgtga acaagctcgt ggtgctgaag
      721 gcgcttttgc ctgatctgag cgcggagccg tacgccctca cgatgttttt ggacgaggca
      781 cggctcgcgg cgcagctgaa ccacccgaac gtcgtgcaga cgtatgaggt cggcaccgag
      841 ggcgatcgtc acgtcatcgt gatggagtac ctcgaggggc agtcgctctc gatcgtgatc
      901 aagcgctcgg agcaggcagg caatccgctg ccgctcggac ttcatttgcg cgtcatcgtt
      961 tcggcgctcg agggtcttca ctacgcgcac gagctcaggg cgtacgacgg ctcactgctc
     1021 cagctcgtgc accgcgacat ctcgccgcaa aacgtgttcg tgacgtacga cggtcaggtg
     1081 aaggtgctcg acttcggcat cgccaaagcc gcaagctcgt ctactcacac ggcgaccggc
     1141 atcgtgaagg gcaaaatcgc ctacatggcg ccggagcaga ccatcggcga cacggtcgat
     1201 cggcgtgccg acctattttc cgtcggctgc atgctgtggg cggctgcgac cgggcgcaag
     1261 ctgtggaaag acacgccgga cgtccacatc atgcgccgtg tcatcaacgg cgacattccg
     1321 acgccgcaga gcgcgaaccc cgcgtgtgac gacgagctca atgccatcgt catgagagcg
     1381 ctcgcggtcg atccgaacca gcgctatcag accgcgctcg agctccagca ggagctggaa
     1441 gcctattgcg aaggcctcga accggcgaaa cagaaggaca tcgcgcggca cgtcgcgacc
     1501 ctgttcgccg acaagcgcgc cgagatcaag gcgctcgtcg aacgtcaact cgcgctcgtc
     1561 gggacggaag agacatcggc atccggctcg cgcggcattc ccgtgctcac gacggatctc
     1621 aaggcctcga ctggcaccca tccatcttgg tcaccgacca agctgggcga aacgatgaag
     1681 agcggcggca gcggcggctc gaagctctgg tgggtagccg tgccgctcct gctcggcggc
     1741 gccggatttt tcttttggcg tagctcgaac agcgcgccct cagccgacgc gcacggcgtg
     1801 ccgacggcgc ccgtggttcg cacgcccgaa gcggcgcccg cgccgaccac ggcaacgatc
     1861 gaattcaagg tcaccccggg ggaagccaag ctcttcctcg atgacgaacc gttgccctcc
     1921 aatccgacgt ccaaggtcct ccgcgtcgac ggggcgattc atcggctgcg cgcgaccgca
     1981 gacggcttca acgccgcgac cgccgaattt acggccgcgc gtgacacgac gctcgacctc
     2041 gacctcactc ccagcgcggc gccggtcgtg gccgcgaccg acgacgactc gagcgcgtcg
     2101 aagggccgcc cgcgcggcag cgtgcgtccg tacggtcgcg tgcgccccgt cgcgcccggc
     2161 acgacgccga ccacgaccga agcaactccg cccgcccccg cgcccaaggt cgccaactgc
     2221 gactcgccct tcttcgtcga caaggacggc atcaagaaga tgcgtcccga gtgcctctga
     2281 gcgccgcgag cgtgccccgt ccgggtgtgg cttcggagca agccgcccgc tgcgagacta
     2341 gtgcggctcg aacttagcga tcacgtcggc catgatcact tgggccgtgt agacgaagac
     2401 gaggatgccc gtcacgtcga cgaggctcgc gatgaaggga gtcgagctcg tcgctgggtc
     2461 gacgcgcagg cgcttgagca gaatcggcag catggagccg atggtgcatc cggcgaagac
     2521 gatgccgacg agcgcgacgc cgaccgtgag cgcgaaattc gtatgctggt ccttgtacat
     2581 gaggacgcga aagaagccga ccgtcgcgag cccgagtccg agcacgagtc ccatgcgcgc
     2641 ttcacgccag aagatgcgcc accagtcggt gagcttgagc tcgcccgtcg cgagcccgcg
     2701 gatgacgagg gtcgaggatt gagcaccgga gttgccgcct gcgctgatga ggagcggcac
     2761 gtagtaggcg gcgccgtgaa tggcgctgag cgtgccgtcg tagtggcgga gcgcggtctg
     2821 cgtgaagaac tcgccgatga agagcgccag tagccacacg ccgcgcttgc gaatgaaccc
     2881 gccgaacgtg gtctgaaaat aaggcacgtc gagcggatcc atgccgccga tcttctgcac
     2941 gtcctcggtt tgttcggccg tgagcacgtc gacgatgtcg tcgatcgtga tcatgccgag
     3001 cagcacgccg gcgccgtcga c
//
LOCUS       DATIML010000651         1918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1868926, whole genome shotgun sequence.
ACCESSION   DATIML010000651 DATIML010000000
VERSION     DATIML010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1868926"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..390)
                     /locus_tag="VLJ38_11165"
     CDS             complement(58..390)
                     /locus_tag="VLJ38_11165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40125.1"
                     /translation="MFDELAPEVIFGGEGVVCRAAQREIRRAMIAAWRKRFQVVKLET
                     MGLGATRSVRVHVATAVPVAFEDGAADGGGNVTHAPAAPALRDPRILCGHCGNECMLA
                     LVHRCDCE"
     gene            complement(487..999)
                     /locus_tag="VLJ38_11170"
     CDS             complement(487..999)
                     /locus_tag="VLJ38_11170"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF023395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HSU40126.1"
                     /translation="MPRTVEKPEALELLAENRRLLLGDGDGCIMCALVRRAPEAAERL
                     AENAHGVALLDRFGSRAGHTIVIAKPHIEDTTALGWQTYAELQRLAYEACAAIERVLA
                     PARTFVAVLGASEQLPMSFPHFHIHVLPVFERDERARPAHVFSWSSGVLVYDDDEARA
                     LAARLRAAWP"
     gene            complement(1009..>1918)
                     /locus_tag="VLJ38_11175"
     CDS             complement(1009..>1918)
                     /locus_tag="VLJ38_11175"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSU40127.1"
                     /translation="LAVSRDASRIALVASGNAWSVSGELPTLFLSSLDLSQGAPPAEF
                     ASSNCGGNQYSHHLPGEPVAVAFDAAGKYVVLSREPALLELEGDTFISLSDESHFDTG
                     FAMFHLNASGGISCASCHPEGGDDGHVWSFSSIGLRRSQALEAHVAERTPFHWSGDLP
                     SFHDLFTEVMLKRMSLPVTPPDTHVQALADWLDGIPALAPADGLDPALVARGQSLFSD
                     AVVGCASCHSGPSYADNLKHDVGTGGSFVTPALTGVGLRAPLMHDGCASSLRARFGVC
                     GGTAHGNVSTLNDADIDALVAFMRSL"
BASE COUNT          324 a          637 c          672 g          285 t
ORIGIN      
        1 tatcatcgga agttgtccct ccaaatgctg ctcgccgcct tccgacgcct gctgcactca
       61 ctcgcaatcg catcgatgga ccaaggcgag catgcattca ttgccacaat gtccgcataa
      121 aatgcgggga tccctcagcg ccggcgccgc cggcgcgtgc gtcacattcc cgccgccgtc
      181 cgccgcaccg tcttcgaacg cgacgggaac cgctgtagct acatggacgc gaacggaacg
      241 cgttgctccg agacccatcg tctcgagttt caccacctga aaccgtttgc gccaggcggc
      301 gatcatcgcg cgtcgaatct cacgctgcgc tgcgcggcac acaacgccct cgccgccgaa
      361 gatgacttcg ggcgcgagtt catcgaacac cggaagctct cgctcccgcg cgactcgttc
      421 ggtcgttcag gctaatgact cctatcggta ccagccggcg ccgtgtagct cgaaccgatt
      481 gacgcgttag ggccacgccg cgcgcaggcg tgcagcgagg gcgcgcgcct cgtcgtcgtc
      541 gtacacgagc acgcccgagc tccaggagaa gacgtgagcg ggacgcgcgc gctcgtcgcg
      601 ctcgaagacg gggaggacgt ggatgtgaaa gtgcggaaag ctcatcggca attgttcgct
      661 cgcgccgagc acggcgacga aggtgcgcgc gggggcgagc acgcgttcga tggccgcaca
      721 cgcctcgtac gcgaggcgct ggagctcggc gtaggtctgc cagccgagcg ccgtcgtgtc
      781 ctcgatgtgc ggcttggcga tgacgatggt gtgccccgcg cgcgagccga accgatcgag
      841 cagggcgacg ccgtgcgcgt tttccgcgag tcgctcggcc gcttcgggcg cgcgacgcac
      901 gagcgcgcac atgatgcagc cgtccccatc gccgagcagc agccggcggt tctcggcgag
      961 tagctcgagc gcttcgggct tctcgacggt gcgcggcatg cgtaaacgtt agagcgaacg
     1021 catgaaggcg acgagcgcgt cgatgtcggc gtcgttcagg gtcgagacgt tgccgtgagc
     1081 ggtgccgccg cacacgccga aacgcgcgcg cagcgagctc gcgcagccgt cgtgcatgag
     1141 cggcgcgcgc aggccgacac cggtgagcgc aggcgtcacg aaggagcccc ccgtgcccac
     1201 gtcgtgcttc aggttgtcgg cgtagctcgg gccggagtgg cagctcgcgc agccgaccac
     1261 ggcgtcggag aagagcgact ggccgcgcgc gacgagcgcc gggtcgaggc cgtcggcggg
     1321 cgcgagcgcc gggatgccgt cgagccagtc ggcgagggct tgcacgtgcg tgtcgggcgg
     1381 cgtcacgggc agcgacatgc gcttcagcat cacttccgtg aagaggtcgt ggaagctcgg
     1441 caagtcgccg ctccagtgga acggcgtgcg ctctgcgacg tgagcttcga gcgcctgtga
     1501 ccgcctcaaa ccaatgctcg aaaaagacca cacgtggccg tcgtcgccgc cttcggggtg
     1561 acacgaggcg caggagatgc cgccgctcgc gttcaggtga aacatcgcga atcccgtgtc
     1621 gaagtgcgac tcgtccgaga gcgaaatgaa cgtgtcgccc tcgagctcga gcagcgcggg
     1681 ctcgcgcgag agcacgacgt attttccggc cgcgtcgaag gcgaccgcca cgggctcgcc
     1741 cggcaggtga tgcgagtact ggttgccacc gcagttgctc gacgcgaact cggcgggcgg
     1801 cgcgccctgg ctcaggtcga gggacgagag gaagagcgtc ggcaactcgc cactcacgga
     1861 ccaggcattg ccgctcgcga cgagggcgat gcggctcgcg tcgcgcgaca cggcgaga
//
LOCUS       DATIML010000652         1917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1868977, whole genome shotgun sequence.
ACCESSION   DATIML010000652 DATIML010000000
VERSION     DATIML010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1868977"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VLJ38_11180"
     CDS             <1..569
                     /locus_tag="VLJ38_11180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40128.1"
                     /translation="IEEARDLCALPDPLQLDLIADAVPGRDARTVAAVAERRGRGRPP
                     GALNKRSAKFREQLLAMCNGQHPALVLARATTTPVEQLAAVLECGRAEAFGFQLRAAV
                     ELMPYLEGKQPTQVELRTHRDVVLIMPSGGTSAEELERIADEAADGMAEGTDWGSAEI
                     IDVLPSMAAQTGTPMRAGSADEAAPSGD"
     gene            1235..1483
                     /locus_tag="VLJ38_11185"
     CDS             1235..1483
                     /locus_tag="VLJ38_11185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40129.1"
                     /translation="MMHSPPVAAVPLTVKGVPDRRFGPYCWTPGRKAALGRAQAAAAK
                     REGFEILAQLDPSDGHWSWQSSPHVLWLANVLAGVRYD"
     gene            1476..1718
                     /locus_tag="VLJ38_11190"
     CDS             1476..1718
                     /locus_tag="VLJ38_11190"
                     /inference="COORDINATES: protein motif:HMM:NF021580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2312 domain-containing protein"
                     /protein_id="HSU40130.1"
                     /translation="MTEGTVAAKQLRLFIERAERIHAEVKSANEDLAEVFKEAKSNGY
                     CPKTMKAVMRLRRLETHVRQEEDALLETYKQALGLD"
     gene            1711..>1917
                     /locus_tag="VLJ38_11195"
     CDS             1711..>1917
                     /locus_tag="VLJ38_11195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40131.1"
                     /translation="MTDCSPLTCARTPAPARARRGSLQLAYDEELERNERIRKLAEHN
                     GYSAEVREFHGARWWFVPRDFVPMI"
BASE COUNT          312 a          631 c          677 g          297 t
ORIGIN      
        1 agatcgagga ggcgcgcgat ctgtgcgcgc tgcccgatcc gctccagctc gatctgatcg
       61 ccgacgccgt gcccggtcgc gatgcgcgca ccgtcgcggc cgtcgccgag cgtcgaggcc
      121 gagggcggcc gccgggcgcg ctgaacaagc gcagcgccaa gtttcgcgag cagctcctcg
      181 ccatgtgcaa cggtcagcac cccgccctgg tgctcgctcg agcgacgacg acgccggtcg
      241 agcagctcgc ggccgtgctc gagtgcggcc gcgccgaggc tttcggcttc cagctccgcg
      301 cggccgtcga gctgatgccc tatctcgagg gcaagcagcc gacgcaagtc gagctccgca
      361 cgcatcggga cgtcgttcta atcatgccga gcggtgggac gtcggccgag gagctcgagc
      421 ggatcgccga cgaggcggcc gacggcatgg cagagggcac ggattgggga agcgccgaga
      481 tcatcgacgt actgccaagc atggcggctc aaacgggtac acctatgcga gccggatcag
      541 ccgacgaggc cgcgccgagc ggcgactagg ccgcgaacgg gcaatcgggc gcacgtctta
      601 gacctaaacg agccgaggcc gatcgatcgc ggggggggca cccccccctg cggctcgcgc
      661 gcgtccttgt gccctatggc gctcggcacg cgccgatttt cggggctgaa agcccgcccc
      721 ttaaggctgt ctgcagccgg gaaacggcgg aaacttggga gccctgaacg gggcacgggg
      781 gcaaggggat tgacaagcac cgttgccgcg cgggaaacaa cgcacctacc gcgccgacgg
      841 gctcgggatc aatggggggg atccgctgaa tggatcgcga cgacgcgcgc tttgttgctc
      901 acgcgctggc tagccgaatc gctggcgatc gggacgagat cgatcgacta gccgcgtcgt
      961 cgcttatgcg gatttccgcc ctggcgacga ggatccgcgc gctcgccgac ggttgggagc
     1021 cggcgctcta cagcgcggcc gagctcatgg cgatctgccg ccggggcgcg ggtctatgcg
     1081 acgagccggc ggcgccgagc cttcaagttt ttgtggataa gatgctcgag ctcgcggccg
     1141 aggcggcgtt gccgcgatcg cgcgcgcctc gaggccgacg gtcgttgctc gtgacggctc
     1201 tcgcgtgcgc ctccgtgtcc ctcggatctg ttcgatgatg cactcgccgc cggttgcggc
     1261 ggttcctctc acggtcaaag gcgtgcccga tcgacggttc ggcccgtact gttggacgcc
     1321 gggccgcaag gcggcgctcg gccgcgcaca agcggcggcc gcgaagcggg aaggattcga
     1381 gatcctcgcg caactggatc cgtcggacgg tcattggagc tggcagtcgt cgccgcacgt
     1441 gctgtggctc gccaacgtcc ttgcaggggt tcgctatgac tgagggcacc gtcgccgcga
     1501 aacagctccg gttgttcatc gagcgcgccg agcggatcca cgccgaagtc aagtcggcca
     1561 acgaggatct cgccgaagtt ttcaaggaag cgaagtcgaa cggctattgc cctaagacca
     1621 tgaaagccgt gatgcggctg cgccgcctcg agacgcacgt tcgccaagag gaggacgcgc
     1681 tactcgagac gtacaaacag gctctcggcc ttgactgatt gctcgcctct cacgtgtgcg
     1741 cgcacgccag cgccagcgcg cgcgaggcgc ggctcgctgc agctcgctta cgacgaggag
     1801 ctcgagcgca acgagcggat ccgcaagctc gccgagcaca acggctactc ggccgaggtt
     1861 cgggagtttc acggcgcccg ctggtggttc gtcccgaggg atttcgttcc gatgatc
//
LOCUS       DATIML010000653         3687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5334841, whole genome shotgun sequence.
ACCESSION   DATIML010000653 DATIML010000000
VERSION     DATIML010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3687
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5334841"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..636
                     /locus_tag="VLJ38_11200"
     CDS             <1..636
                     /locus_tag="VLJ38_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HSU40132.1"
                     /translation="TDGNQEFLIATKQGQSIRFHEQQVRPMGRNAGGVKAIELESGDE
                     VVGLARTEPERTWVLAVCERGYGKRTALEEFRAQNRGGKGIILIDASDRNGPVVGIAL
                     VKPEDEIMLITDRGQTIRTPVDGVRETGRNAQGVKLMSVGDDERVVAFEPIGESSAGA
                     VLDGGSIPPEAGDEGEVDGTGEGSDGGVGSGSIAPTSGENGAGGDGEPEER"
     gene            701..1540
                     /gene="nth"
                     /locus_tag="VLJ38_11205"
     CDS             701..1540
                     /gene="nth"
                     /locus_tag="VLJ38_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HSU40133.1"
                     /translation="MISVKPGGKHATRIAAGKPVASKRAAAVEKRSTKLPAAAPKKPK
                     ATRGASAKPGVAAEPLAPRAVFRKLAAYHADAHCELEHRSPFELIVATVLSAQSTDVT
                     VNQVTPELFRRWPTPAALARADAADVERVILRTGFFRQKTKSIQGLAQKLVAEHGGEV
                     PRTLAELVKLPGVGRKTANVVLGVAFGTPEGVVVDTHVQRLSQRLGWTRHQEPLEIEQ
                     DLMREFPRDDWDAIGHVLIFHGRRICTARKPACASCPVAAHCPSAFRAENVGRKPARL
                     RPA"
     gene            complement(1537..1866)
                     /locus_tag="VLJ38_11210"
     CDS             complement(1537..1866)
                     /locus_tag="VLJ38_11210"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HSU40134.1"
                     /translation="MSLKIYPVILELVRRLAPVIRVLRCRSLALADQTERALISVPLN
                     VAEGAYSRGKNRQARFQSAAASARETLACLETAEAMGFIGPIDRELAALFHRVIGTLV
                     RLVEPRG"
     gene            2834..>3687
                     /locus_tag="VLJ38_11215"
     CDS             2834..>3687
                     /locus_tag="VLJ38_11215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40135.1"
                     /translation="MASAAVIGFEDVHADVSWRRAHEELVRLSVKRAGLDFEEGRWLL
                     RAFRSGAHRELGYGSFHEYTERLFGYGPRLTHDKLRVAEALEALPDTVEELKAGTLSF
                     SAVRELTRVAVPATEREWLRAARGRTVREVEELVSGHRAGSRPGDVPDASARRHVLRF
                     EVSGEALASFREAMAKIRREAGEALDDDAAILLLSRSVLEGRRDEARSSYQVALTVCE
                     RCRQGQQQGRGELVQVSRAVVDMAECDGQHIGHLEIGAEPRAHVGTHVGEAKKPTRAT
                     QTIPPALRR"
BASE COUNT          630 a         1227 c         1306 g          524 t
ORIGIN      
        1 accgacggca accaagagtt cttgattgcg accaagcagg gccaatcgat tcgcttccac
       61 gagcaacagg tgcgccccat gggccgcaac gcgggcggcg tgaaagccat cgagctcgag
      121 tcaggcgacg aggtcgtggg actagcgcgc acggagcctg agcgcacttg ggtcctcgcg
      181 gtctgtgagc gcggctacgg caagcgcacg gcgctcgagg agtttcgcgc gcagaaccgc
      241 ggcggcaaag gaatcattct gatcgacgcc agcgatcgca acggtccggt cgtcggcatc
      301 gcgctcgtga agccggagga cgagatcatg ctcatcaccg accgcgggca aacgatccgc
      361 acgccggtcg acggcgtgcg cgagacggga cgcaacgctc agggcgtgaa gctcatgagc
      421 gtcggcgacg acgagcgtgt cgtcgcgttc gagccgatcg gcgagagcag tgcgggcgcg
      481 gtgctcgacg gcgggtcgat cccgcccgag gccggcgacg agggcgaggt cgacggcacc
      541 ggcgagggca gcgacggggg cgtcgggtcg ggcagtattg cgccgacttc cggcgagaac
      601 ggagccggcg gcgatggcga gccggaagag cgctgaggtc cggagccctc gcgggcgagc
      661 ggtcgcagcg gcgaagcccg tccaaaaacc cgcgcgcgtc gtgatttcgg tcaagccggg
      721 cggcaagcac gccacgcgta tcgccgcagg caagcccgtc gcgagcaagc gcgcggcagc
      781 cgtcgagaag cgcagcacga agctcccggc ggccgcaccc aagaagccga aggccacgcg
      841 cggcgcgagc gcgaaacccg gtgtcgctgc cgagccgctc gcgccgcgcg cggtgttccg
      901 aaagcttgcc gcgtaccacg ccgacgcgca ctgcgagctc gagcaccgct cgccgttcga
      961 gctcatcgtc gcgaccgtgc tctcggcgca gagcacggac gtgaccgtga atcaggtgac
     1021 gcccgagctc ttccgtcgct ggccgacgcc ggccgccctc gcccgcgccg acgccgctga
     1081 cgtcgagcgc gtgattttac gcacgggctt ttttcgccaa aagacgaagt cgattcaggg
     1141 gctcgcgcag aagctcgtcg ccgaacacgg cggcgaagta ccgcgcacgc tcgccgagct
     1201 cgtcaagctg ccgggggtcg gccgcaagac cgccaacgtc gtgctcggtg tcgcgttcgg
     1261 cacgcccgaa ggcgtcgtgg tggacacgca cgtgcagcgg ctgagccagc ggctcggttg
     1321 gactcggcat caggagccgc tcgaaatcga gcaggatctc atgcgcgagt ttccgcgcga
     1381 cgattgggac gcgatcgggc acgtcctcat cttccacggt cgccgcatct gcacggcgcg
     1441 caaacccgct tgcgcgagct gccccgtcgc ggcgcactgc ccgtcggctt tccgcgccga
     1501 gaacgtcggg cgcaaacccg cgcgcttgcg cccggcttag ccacgcggct cgacgagacg
     1561 cacgagcgta ccgatgacgc gatgaaagag cgctgccagc tcgcggtcga tgggcccgat
     1621 gaagcccatg gcttcggcgg tttccaagca cgcgagcgtt tcccgcgctg aagcggcagc
     1681 tgattgaaac cgtgcttgcc gattcttgcc acggctgtag gcgccctccg cgacgttcag
     1741 tggaacgctg atgagtgccc gctccgtctg atcagccagc gccaaactgc gacaacgcag
     1801 cactctgatg accggcgcta gccgacgaac gagttcgaga atgacgggat agattttgag
     1861 tgacatggat gttcctcctg tccccgcttg ctcgaggacc taaacgtcca cgccggcgcg
     1921 cgcaggccgg atcaaggctc gcgagtcctc gagcgaccgc gcgcctgcgc gcggccccgg
     1981 ccttgatccg gccgagcacg ccggcacact caaaagtccc gagacaccct tgcacctgcc
     2041 tcggggcgga gggggcctgc gttcccgcga gtgagacagc aggaaagacc gtccgcggtc
     2101 aagcacagcg gccgctcgga gtcgcgttca cttgttttgg tgtgcgggaa tgagctgccc
     2161 ccgcgcgggt gcggcgctgc acgtcctgcg tgctcggcct tcagcctccg cgcgcaggcg
     2221 cccgccaagc gcccgcttcg cggtcgcggg ggcgcggcga cagcggccgg cgtcgggcgg
     2281 agcgcgaaag acgcgcgtca ggcgacggcg cgcggaattg cacgagatgc aggcgccgtg
     2341 aatagatgcg cgatgagcta agcggaactc ggccggcgac cacacgccga gcgcccgatc
     2401 gccgtcgccg ggtaccgcta ttccgctcca cgccgcgaag accgtgcggt gacttcagcg
     2461 cccgcagcgg cgtggtgctc ggccgcgggg ctaggggctc gatacggcgg cgatgtcagc
     2521 cgatgttacg gcccgctccg ccgcccgagc ctttggcttg tggtgttgca gcgaactcgt
     2581 gcggggctga aagagcaggt gatccgtcga tttgtatgga cagctttccg ccgacgaaga
     2641 gcgcacatcc gttcgacgag ctctgcatag cgtcgtggcg ctcgtctgct cgacggagcg
     2701 cgcgtttcgc ggcgccggcg agtcgactgc tgtcctgggc gcgcaaaggc gcacagcgcg
     2761 gcgcgcgcga agccgaaaaa ctgcgtgata gaggagatcg tcgactcaga agcacaacga
     2821 gggagggttc gacatggcat cagcagcagt catcggattc gaggacgttc acgccgacgt
     2881 ctcttggcgg cgcgctcacg aagagctcgt tcgactttcg gtgaagcgcg cggggctcga
     2941 tttcgaggaa gggcgctggc tcctgcgggc attccgctcg ggagcccatc gcgagctcgg
     3001 gtacggctcg tttcacgagt acacggagcg gctcttcggc tacggcccac gcctcacgca
     3061 cgacaagctc cgggtcgctg aggcactcga agcgctgccc gacacagtcg aagagctcaa
     3121 ggcggggacc ctcagcttct ccgccgtgcg ggagctcacg cgcgtcgcag tcccagcgac
     3181 cgagcgcgag tggctccgag cagcgcgggg gcgcacggtt cgcgaggtgg aagagctcgt
     3241 gtctggtcat cgtgccggaa gccgccccgg cgacgtcccc gacgcgagcg ccaggcgtca
     3301 cgtgctccgc ttcgaagtct ccggcgaagc gctcgcgagc tttcgcgaag cgatggcgaa
     3361 gatccggcgc gaagcgggcg aagcgctcga tgacgacgcg gccatcttgc tcctcagtcg
     3421 tagcgtcctc gaaggcaggc gggacgaagc ccggtcgagt tatcaggtgg cgctcaccgt
     3481 gtgtgagcgc tgccggcagg gacagcagca gggccgtggt gagctcgtcc aggtgtcacg
     3541 ggcagtggtc gacatggccg agtgcgatgg gcagcacatc gggcatctcg aaataggcgc
     3601 cgaaccgcgc gcccacgtgg gaacccacgt gggcgaagcg aagaaaccca cgcgcgcgac
     3661 gcaaaccatc ccgcctgctc tccggcg
//
LOCUS       DATIML010000654         1864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1579405, whole genome shotgun sequence.
ACCESSION   DATIML010000654 DATIML010000000
VERSION     DATIML010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1579405"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VLJ38_11220"
     CDS             <1..869
                     /locus_tag="VLJ38_11220"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HSU40136.1"
                     /translation="SVRVAGFALALLGCAGIVTSELDDERPLEIARNFYGTVAVYDVD
                     QHDPEAHHYSLTHGVVVHGRQFRAPDKQDRPLAYYGENSGVGRALRFFAAEPSLRVGA
                     VGLGVGTLAHYVHADQHLSFYEINPAVVRLAQKHFSYLSHCGSACDIVLGDARLSLER
                     ESPKNFQVLVLDAFSGDAVPAHLLTREALDLYLRHLAPDGIIAVNITNRQLDLAPVLA
                     GLAEHGDLRSVRVYSADDPRGLLYHADWILLTRNERFLTVTPPVLPPELPKPKPAVLW
                     TDSYSNLFQLLK"
     gene            complement(894..>1864)
                     /locus_tag="VLJ38_11225"
     CDS             complement(894..>1864)
                     /locus_tag="VLJ38_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HSU40137.1"
                     /translation="SGVKPEEARELLHKHRIEKLLVVENKKLVGLITIKDLLQAERNP
                     LAVKDDRGRLRVGAAVGPGPDRVARTEALIEVGADVIVVDTAHGHSRGVLEAVADTKK
                     RFPHIELIAGNIATAEAARALIDSGVDAIKVGIGPGSICTTRIVAGIGVPQITAIADC
                     AEVAEPRGIPVIADGGIKYSGEVTKALAAGASTVMIGSLFAGTDESPGELVLYQGRSY
                     KVYRGMGSLGAMKRGSKDRYGQAGAADEKLVPEGIEGRVPHRGSLASIVQQLVGGLRS
                     GMGYTGSRTIGDLRKNGQFIRITSQGLRESHVHDVMISEEAPNYHL"
BASE COUNT          280 a          700 c          559 g          325 t
ORIGIN      
        1 gctcggtgcg cgtggccggc ttcgcgctcg cgctgctcgg ctgcgcgggg atcgtcacga
       61 gcgagctcga cgacgaacgg ccgctcgaaa tcgcgcgcaa cttctacggc acggtcgcgg
      121 tttacgacgt cgatcagcac gaccccgagg ctcaccatta ttcgctcacg cacggcgtcg
      181 tcgtgcacgg tcgccaattt cgcgcgccgg acaagcaaga tcgccccctc gcgtactacg
      241 gcgaaaactc cggcgtcggc cgcgcgcttc gcttcttcgc tgctgagccc tcgctgcggg
      301 tcggcgccgt cgggctcggt gtcggcacgc tcgctcacta cgtgcacgcg gaccaacacc
      361 tcagcttcta cgaaatcaac cccgccgtcg ttcggctcgc ccaaaaacac ttcagttacc
      421 tttcgcattg cggcagcgcg tgcgacatcg tcctcggcga cgcgcggctc tcgctcgagc
      481 gcgaatcccc caaaaatttc caggtgctcg tgctcgacgc cttcagcggc gacgccgtcc
      541 ccgcgcacct gctcacgcgc gaagcgctcg acctctacct ccgtcacctc gcgccggacg
      601 gcatcatcgc cgtcaacatc acgaaccgcc agctcgacct cgcgcccgtg ctcgccggcc
      661 tcgcggaaca cggcgacctc cgcagcgtcc gcgtctacag cgccgacgac ccgcgcggcc
      721 tgctctacca cgccgactgg atcctcctca cgcgcaacga acgcttcctc accgtgacgc
      781 cgccggtcct gccccccgag ctaccgaagc cgaagcccgc ggtgctctgg actgacagct
      841 acagtaacct cttccagcta ctcaagtgac gcgcggcgcg ccccgcgcgt cacctacaag
      901 tgataattcg gcgcctcttc cgaaatcatc acgtcgtgca cgtggctctc gcgcagtccc
      961 tggctcgtga tgcggatgaa ctgcccgttt ttgcgcaaat ccccgatcgt gcgcgagccc
     1021 gtgtagccca tgccggaacg caggccgccg acgagctgct gcacgatgct cgcgagtgaa
     1081 cctcggtgcg gcacgcggcc ctcgatgccc tcggggacga gcttttcgtc cgcggcgccc
     1141 gcttggccgt agcgatcctt gctgccgcgc ttcatcgcgc cgagcgagcc catcccgcga
     1201 tacaccttgt aactgcggcc ttggtagagc acgagctcac cgggcgactc atccgtgccc
     1261 gcgaacagcg agccgatcat gacggtcgac gcgcccgcgg cgagcgcctt cgtgacttcg
     1321 cccgagtact tgatgccgcc gtcggcgatg acgggaatgc cgcgcggttc ggcgacctcg
     1381 gcgcagtcgg cgatggccgt gatttgcggc actccgatgc ccgcgacgat acgcgtcgtg
     1441 cagatgctgc ccgggccgat gccgaccttg atggcgtcga cgcccgagtc gatgagcgcg
     1501 cgcgcggctt ccgccgtcgc gatgttgccc gcgatgagct cgatgtgcgg aaagcgcttc
     1561 ttcgtgtcgg ccacggcctc gagcacgcca cgtgagtgcc cgtgcgccgt gtccacgacg
     1621 atcacgtcgg cgccgacttc gatcagcgcc tcggtgcgcg ccacgcgatc gggtccgggt
     1681 cccacggcgg cgcccacgcg caaacggccg cgatcgtctt tgaccgcgag cggatttctc
     1741 tccgcctgca aaagatcctt gatcgtgatg agccccacga gcttcttgtt ctcgacgacg
     1801 agcagcttct cgatgcgatg cttgtgcagg agctcgcgcg cttcctcggg cttcacgccg
     1861 ctcg
//
LOCUS       DATIML010000655         3611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_713812, whole genome shotgun sequence.
ACCESSION   DATIML010000655 DATIML010000000
VERSION     DATIML010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713812"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..1389
                     /locus_tag="VLJ38_11230"
     CDS             166..1389
                     /locus_tag="VLJ38_11230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40138.1"
                     /translation="MSSSRFGFTPFGLRTAAPPSGWSASKAPERKPSRWAFRTTAVAS
                     VTVLSAWMAMRTLPWFGPLVADTLRGAIGSERVTELEEAVADVEDHVEQATNNGKARA
                     LSEVTPAALLSTSQEAPATLPLERRPANVPVPYPAVAASEDGEWSVVPVRTGGTPALF
                     RTLIHPDPDRRYAELFVFALDLSKLSVHATAGSIEPKSADSAASATRPGIVPEADRGE
                     LIAAFNGGFKAEHGQFGMMADGKTLLAPKPLACTIAASADGRLSIAPWTKLAPRAQDF
                     VWWRQTPGCMLENGVLHPGLRSTETKNWGATIDGDTVIRRSALGLSSDGQTLFVGISN
                     STTARAMALGMRDAGAVTVAQLDVNFSFPRFVVYEEGDSGQLSAVGAVKGFLYEPDQY
                     LGHSSTRDFFYVTVR"
     gene            complement(1398..2927)
                     /locus_tag="VLJ38_11235"
     CDS             complement(1398..2927)
                     /locus_tag="VLJ38_11235"
                     /inference="COORDINATES: protein motif:HMM:NF016190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM44-like domain-containing protein"
                     /protein_id="HSU40139.1"
                     /translation="MRRRGLKRTRVALFVGALSFSAALGARPGGGQAYRGGSSRSSGS
                     SSHYSPSSGSSRSYGPSGGGGDVDSGLLLELLLLCFRYPPLGLLVAGGVVGFVLLNRR
                     RTSGLSEWSVGGMPARVETTTAATSARRELTRLTESDPGFSLVLFEDFAYALYAELEM
                     KRARGEVRRLAAFLSPAVMELLYDPTLERVEGVVIGAMRYVSVELAADRTAVTLELEA
                     NLSEVRGGMVQRFYVCDRLVLTRARNARSRPPGRTHKLDCPNCGAPLEGMRGTTCGYC
                     GQEVGGGRLDWQLERIERLTTEPRPPDVTSDAPESGSQLPTLVAPGAEQRMNELVARD
                     PASEPAAVSARVALVFNQLQFGWSNRDLSRIRPFVTDNLFQYFGYWIDVYTSVRARNV
                     TENARILKIELVDVTADAVYDAVTVRLFATSLDYTLSDDGKLLSGSRERERQYSEYWT
                     LVRGRGARGRPRSEPVCPACGAPLNIGMAGNCGYCHARIVSGEFDWVLSRIEQDEAYG
                     G"
     gene            complement(2909..3529)
                     /locus_tag="VLJ38_11240"
     CDS             complement(2909..3529)
                     /locus_tag="VLJ38_11240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40140.1"
                     /translation="MSEREFLEAAAKERTAAAIRGIEKQTAVEVVVAVRRRAGRYLAT
                     SIAFGAVCATLAFAVMWFSPRVYDVRTMPLDAALTLVLGVALGMALPGLRRLLTPKRT
                     LAQRAQLAAKIAFSELGIAKTRGRTGLLVYVALFERTAVLVPDSGIPAVAVTNSLAAI
                     GGALSHAVAALDMAAFLAALSELGPACAAVLPRRADDENELCDDVA"
BASE COUNT          620 a         1262 c         1185 g          544 t
ORIGIN      
        1 ctagcgtccg taacaggacg gctccattgt aggcagagcg cccacccgcc cgctcagcgc
       61 acaaattggc cgaaatttag gagtacggga ccgaggcgcg tcacgatgac ggcgcgcgca
      121 cggatggcac accggctgca gtagcccccc tcggggagca acaacatgtc gtcatcacgc
      181 ttcggtttca ctccgttcgg cttacgtaca gccgctccgc cgagcggctg gagcgcctcc
      241 aaagcgcccg agcggaagcc ttcgcgctgg gccttccgca cgacggccgt cgcctccgtc
      301 acggtgctca gcgcctggat ggccatgcgc acgctgccgt ggttcggccc gctcgtcgcc
      361 gataccctgc gcggcgcgat cgggagcgag cgtgtcactg agctcgaaga ggccgtcgcg
      421 gacgtcgaag accacgtcga gcaagcgacg aacaacggga aggctcgcgc cctgtcggag
      481 gtgactcccg ccgcactgtt gtccaccagc caagaggcgc ccgcgaccct accgctcgag
      541 cgccgcccgg cgaacgtccc cgtgccctac cctgcggtcg cagcaagcga agacggcgag
      601 tggagcgtcg tgccggtccg caccggcggc acgcccgcgc tgttccgcac gttgattcat
      661 cccgatcccg accgccgcta cgccgagctc ttcgtcttcg cgctcgatct ctcgaagctc
      721 agcgtgcacg cgacggcggg cagcatcgag ccgaagagcg ccgacagcgc agcgagcgct
      781 acgcgtcccg gcatcgtgcc ggaagcggat cgcggcgagc tcatcgcggc gttcaacggc
      841 ggcttcaaag ccgagcacgg ccaattcggc atgatggccg atggcaagac gttgctcgcg
      901 cccaagcccc tcgcctgcac gatcgcggcc tcggcggacg gcaggctgag tatcgcgccg
      961 tggaccaagc ttgcgccccg cgcacaggac ttcgtctggt ggcgccaaac gccgggctgc
     1021 atgctggaaa atggcgtgct gcatcccggt ttgcgctcca cggagaccaa gaactggggc
     1081 gcgaccatcg acggggacac cgtgattcgc cgctcagccc tggggctcag ttccgacggt
     1141 caaacgctct tcgtgggtat cagcaactcg acgacggcgc gggccatggc gctcggaatg
     1201 cgtgatgccg gcgccgtgac cgtcgcgcag ctcgacgtga acttctcgtt cccgcgcttc
     1261 gtcgtttacg aggagggtga cagcggccaa ctcagcgccg tcggcgccgt gaagggcttc
     1321 ttgtacgagc ccgaccagta cctcgggcat tcctcgacgc gcgacttctt ttacgtgacc
     1381 gtgcgctgag tcacctgtta gccgccgtag gcttcgtcct gctcgatgcg cgagagcacc
     1441 caatcgaact cgccgctcac gatgcgtgcg tggcagtagc cgcaattgcc ggccatgccg
     1501 atgttcaggg gtgcgccgca agccgggcac acgggctcgc tccgcgggcg accccgggcg
     1561 ccccggcccc gcacgagcgt ccaatattcg ctgtactgtc gctcgcgttc gcgactgccg
     1621 gagagcaact tgccgtcgtc cgagagcgtg tagtcgagac tcgtggcgaa cagccgtacg
     1681 gtgacggcgt cgtagacggc atccgccgtg acgtcgacga gctcgatctt caagatgcgt
     1741 gcattttccg tgacgttgcg cgcgcgaacg ctcgtgtaca cgtcgatcca atagccgaag
     1801 tactggaata gattgtccgt cacgaacggc cggatccggg aaagatcgcg attggaccag
     1861 ccgaattgga gctggttgaa gacgagcgcg acgcgcgcag aaactgccgc gggctcgctc
     1921 gccggatccc gtgccaccaa ttcattcatg cgctgctcgg cgcccggcgc tacgagcgtc
     1981 ggcagttgac tgccgctttc gggcgcatcc gaagtgacgt ccggcgggcg cggctccgtc
     2041 gtgaggcgct cgatgcgctc gagttgccaa tcgagccgac cgccgccgac ttcctgcccg
     2101 caatagccgc aggtcgtgcc gcgcatgccc tcgagcggcg ctccgcagtt cgggcagtcg
     2161 agcttgtgcg tgcgaccggg cggacgcgag cgggcgttgc gagcgcgcgt gagcacgagt
     2221 cgatcgcaga cgtagaaacg ctgcaccata ccgccgcgca cttcactgag gttcgcctcg
     2281 agctcgagcg tgacggccgt gcgatcggca gcgagctcca cgctgacgta ccgcatcgcc
     2341 cctatcacga cgccttcgac gcgttccagc gtcggatcgt agagaagctc catgaccgcg
     2401 ggactcaaaa acgccgcgag ccgccggacc tcgccgcgtg cgcgcttcat ctcgagctcg
     2461 gcgtagagcg cgtacgcgaa gtcctcgaac aaaacgagcg aaaatcccgg gtcgctctcg
     2521 gtgagtcgcg tgagctcacg ccgggcggaa gtcgcagccg tcgtcgtttc gacgcgcgcc
     2581 ggcatgccgc ccaccgacca ctcggagagc ccgctcgttc gcctgcggtt gagaagcacg
     2641 aaaccgacga cgcctccggc cacgagcaga ccgagcggcg ggtagcgaaa gcagagcagc
     2701 aagagctcga gcaagaggcc cgaatcgacg tccccgccac caccgctcgg cccgtagctg
     2761 cgcgagctcc cactactcgg cgagtagtgg gaactgctgc cgctcgaacg gctgctgcca
     2821 ccccgataag cttggccacc gcccggtcgc gcgcccagcg cggcgctgaa cgacagcgcg
     2881 cccacgaaca gcgcgacacg cgtgcgcttc aggccacgtc gtcgcacagt tcgttctcgt
     2941 cgtcggctcg ccgcggaagg acggccgcgc aggcgggacc gagctcgctg agagccgcta
     3001 aaaaagcagc catgtcgagc gccgcaacgg catgagacag cgctccgccg attgcggcga
     3061 gcgaattcgt gactgcgacc gcagggatgc cgctgtccgg gacgagcacc gcggtacgct
     3121 cgaagagggc gacgtacacg agcagtcccg tgcgtccgcg tgtcttcgcg atcccaagct
     3181 ccgaaaacgc gattttggca gccagttgcg cgcgctgcgc gagcgtccgc ttcggtgtga
     3241 gcaggcgccg taggcccggc agcgccatgc ccagggccac gccgagcacg agcgtgaggg
     3301 cggcgtcgag cggcatggtg cgcacgtcat acacgcgcgg gctgaaccac atcacggcga
     3361 atgccagcgt ggcgcatacg gcaccgaacg cgatgctcgt cgcgagatag cgccccgcac
     3421 ggcgccgcac ggcgacgacc acctcgaccg ccgtctgctt ctcgatgccg cgaatggcgg
     3481 ccgccgtgcg ctccttggcg gcggcctcga gaaattcgcg ctcagacatg ccgcggcgag
     3541 cataccgccg ctctccacgt aacggcgtct ttccggcgtg cgctcgaggc taaaaccagc
     3601 cgagctcgat g
//
LOCUS       DATIML010000656         2476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3884811, whole genome shotgun sequence.
ACCESSION   DATIML010000656 DATIML010000000
VERSION     DATIML010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3884811"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(361..1518)
                     /locus_tag="VLJ38_11245"
     CDS             complement(361..1518)
                     /locus_tag="VLJ38_11245"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HSU40141.1"
                     /translation="MSQPDRLDDVVQTLGELGKTAVPVEDQLRAGYRRERIVRLIGSA
                     ITAEGRRARRRRAFPWLAAAAALVLGIGGAGAWNWYHVVGPSNPVAAATERASAGEAR
                     LVAGDVSVRRNGQATALHAGDVLTGGESVSTAAYSVAEIGIASGRAELEASSELELVA
                     PTASERRLRLGSGSVDVDLPRKLEGGKHLIVETPDVEVMVIGTAFTVAVGSEHGAAST
                     HVRVRRGTVWIMHAGTQRAVLHAGDEWTSPVAKAAAVTPEPVSPAPVAGRALHERPRR
                     AAPPARVVERTRVVDSGTLAEENRMFQAGLTARNAGDAGGAADAFASLLAHYPRSVLR
                     EQALAEQFRALERAGRGSAAAVGARRYLASYPNGFARADAERIANGLLGGR"
     gene            complement(1515..2117)
                     /locus_tag="VLJ38_11250"
     CDS             complement(1515..2117)
                     /locus_tag="VLJ38_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU40142.1"
                     /translation="MIEGGAEPAARGPTDEQIVDAVQSGNTAMAGQVYDRLLGAVDHA
                     LYRVFGRREHDHDDLVQAAFEQIVLTLSRRSYARACSLQTWASTIATHVAFNALRARR
                     RERRVFDRETTKLNEPEPPAPSDLERTAGARADLERVRWLLAQMKPERAETVFLHDVL
                     GHDLAEIALMTRVSVAAAQSRLVRGRRELRERLTKEQLMS"
BASE COUNT          406 a          840 c          848 g          382 t
ORIGIN      
        1 gtgccgaggg tgcacgcacc cgcaaccagt aaactcatgc caacgcgaga aatagtcata
       61 tgagcgtcct ttgagcggct cgcctttcgg ggggaagcca aatcagtgtc atggtaaccg
      121 ccaccctggc aggcaggcac acagtgtcgg acgagccgac gatcgcgggt gcgcgctcaa
      181 gtaatgtgca tgcggccgaa atgcagcttg caacaatctt gcaagctgcg ttcgaacgag
      241 cgcgacgaga gcggcaagtt gccgcggttg tcggaccgcc atccggacgg gatccgtcat
      301 ctgggcagtc gcaaagcgcc gaagttccgc gcgtcgaacg gatgcgtatc gcgcgtgggc
      361 tcagcgcccg ccgagcaaac cgttcgcaat gcgctcagcg tcggcgcgag caaatccgtt
      421 cggatagctc gccaagtaac gacgcgcgcc gactgctgcc gcggagccgc gccccgcacg
      481 ctctagtgca cggaattgct ccgcgagcgc ctgctcacgc agcaccgaac gcgggtagtg
      541 cgcgagcagc gacgcgaagg catccgcagc accgcccgca tctccggcat tccgtgccgt
      601 gagacccgcc tgaaacattc ggttctcttc cgcgagcgtt ccgctgtcga caacgcgcgt
      661 tctttcgacg acacgggctg gcggagccgc acggcgcggc cgctcgtgca gggctcgccc
      721 cgcgacaggc gccggtgaaa ccggctcggg agtgaccgcg gccgccttcg cgaccggaga
      781 cgtccactcg tcacccgcgt gcagcaccgc gcgctgcgtg ccggcgtgca tgatccacac
      841 ggtgccgcga cgcacgcgca cgtgcgtcga agcggcaccg tgctcgctgc cgacggctac
      901 ggtgaaggcc gtgccgatca ccatgacctc gacgtcgggc gtctcgacga tcaagtgctt
      961 gccgccttcg agcttgcgcg gaagatcgac gtcgacgctg ccgcttccga gacgcaggcg
     1021 ccgctcgctc gccgttggag ccacgagttc gagctcgctc gaggcttcga gttcggcgcg
     1081 tccggaagcg atgccgatct cggcgaccga ataggcagcc gtcgagacgg actcaccgcc
     1141 cgtgaggacg tcacccgcgt gcagtgccgt cgcttggccg ttgcggcgta cggagacgtc
     1201 gcccgcgacc aggcgcgctt cacccgcgct cgctcgctcg gtagccgctg ccaccgggtt
     1261 cgacgggccg acaacgtgat accagttcca ggcgccggct ccgccgatac cgagcacgag
     1321 cgcggccgcc gcagcgagcc acgggaacgc gcgacgccgc cgcgctcgcc ggccttcggc
     1381 cgtgatcgcg gagccgatca ggcgcacgat gcgctcgcgg cggtaaccgg cgcgcagctg
     1441 atcctcgacg ggcacggccg ttttgccgag ctcaccgagc gtctgcacga cgtcgtcgag
     1501 gcggtcaggc tggctcatga catgagctgc tccttcgtca gcctttcgcg cagctcgcgc
     1561 cgcccgcgta cgagacgaga ctgcgcggcg gcgacggaca cacgcgtcat cagcgcaatc
     1621 tcggcgaggt catgaccgag cacgtcgtgg agaaacaccg tctccgcgcg ctcgggtttc
     1681 atctgagcga gcagccagcg cacgcgctcg agatcggcgc gcgccccggc ggtgcgctcg
     1741 aggtcggagg gagccggagg ctcgggctcg ttcagcttcg tcgtctcgcg gtcgaatacg
     1801 cgccgctcgc ggcggcgcgc ccggagcgcg ttgaaggcga cgtgagtcgc gatggtggag
     1861 gcccaagtct gcaggctgca cgctcgagcg taagagcgcc gcgaaagcgt gagcacgatc
     1921 tgctcgaacg ccgcctgcac caggtcgtcg tggtcatgct cgcggcgacc gaacacgcga
     1981 tagagcgcgt ggtccaccgc gccgagcagc cgatcataga cctgccccgc catggcggta
     2041 ttgccgctct gaaccgcatc gacgatttgc tcgtccgtcg gtccacgcgc agcgggctcg
     2101 gccccaccct caatcactct caaccgagcg ctggtcgctt tagaagactg aggcactaca
     2161 cgccaatggt aacagacccc ggcgctatca ggcacccgcc ggttgggggg tcaatccgaa
     2221 aaaagcttgc ggtggcgacg ggatcgcgcg tttagggacg ccgccggcct agaatttttc
     2281 aggcgagaat ctcttcttcg gctgcctgga gcgccagggc cgcggggact gctaggtttg
     2341 ggcgtccgat gcgaaacgtg ggccaatttc ttacccttgg ggtttttatg ttggcggggt
     2401 gcggggacaa gacgttcgcg ttgtggccgg gggcggccgg cggggcgccg atggctggcg
     2461 gcgcgggcgc cggggc
//
LOCUS       DATIML010000657         1878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5046439, whole genome shotgun sequence.
ACCESSION   DATIML010000657 DATIML010000000
VERSION     DATIML010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5046439"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1172
                     /locus_tag="VLJ38_11255"
     CDS             <1..1172
                     /locus_tag="VLJ38_11255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40143.1"
                     /translation="ELGEHLEADREALADGLQGVARELEKSPLARKTAEALADKRLDD
                     AEKALRELAEKLKSKKNPPTTAELERLRSALQQASEQTHARLEAIEQRRRELNEQRES
                     LLKKKSDPAASAANQKKLEDNKRQLEHLDRQKSRAEKSKEQMSELDRELSKAAQELQQ
                     ALNERQKSAGEQASDELEQSAEDVHRMGQKQLDDAQKRELLQRLKEMREVLRQQGQGG
                     DQRKARMERFGQSARGQKPGGSGQDGQPGQSKPGGGELRIGRGGGGIEIPGASTTTQG
                     APGQSANQDGSGDGPSQPGQGYGNGHDPNLTGDRSHVAGQTHDVSAAGIDSGEGTASA
                     EVIYGAAQRGFVGKGYKDVFTEYQSVAEQVIDKDEIPPGYRFYVRRYFQLIRPRE"
     gene            1202..>1878
                     /locus_tag="VLJ38_11260"
     CDS             1202..>1878
                     /locus_tag="VLJ38_11260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU40144.1"
                     /translation="MSELDQARDEIVEFQKKLGTMREEIGKVIVGQRAVVDGVLTCLL
                     AGSHALLEGVPGLGKTMLVRTLAQTLGLEFSRIQFTPDLMPADVIGTVVLDEGAQGGK
                     VFEFRKGPIFSNLVLADEINRATPKTQSALLEAMQEQRVTVGRTTHRLEAPYFVLATQ
                     NPLEMEGTYPLPEAQLDRFFFKLEVPFPTREELHAIVDRTTSDQHAEAHTVASRAEIL
                     ALQALVRR"
BASE COUNT          411 a          614 c          631 g          222 t
ORIGIN      
        1 ccgaactcgg cgagcacctg gaagccgatc gcgaggcgct cgcggacggc ttgcagggcg
       61 tggcgcgcga gctcgaaaag agcccgctgg cgcgcaagac ggccgaagcg ctcgccgaca
      121 agcggctcga cgatgccgag aaggcgctgc gcgagctcgc cgaaaagcta aaatcgaaga
      181 agaatccgcc gaccaccgcc gagctcgagc gcttgcgcag cgcactgcag caagcgagcg
      241 agcagaccca cgcacggctc gaagccatcg agcagcgccg ccgcgagctc aacgaacagc
      301 gcgaaagtct gctcaagaag aagagcgacc ccgccgcgag cgccgcgaac caaaagaagc
      361 tcgaagacaa caagcgccag ctcgagcacc tcgaccgcca gaagagccgc gcggagaaga
      421 gcaaagagca aatgtccgag ctcgaccgtg agctcagcaa ggccgcgcaa gagttgcagc
      481 aagcgctgaa cgagcgccaa aagagcgccg gcgagcaggc ctccgacgag ctcgagcaga
      541 gcgccgagga cgtgcaccgg atgggccaaa agcagctcga cgacgcgcag aaacgcgagc
      601 ttttacagcg cttgaaggag atgcgggagg tgctgcgcca gcaaggccaa ggcggcgacc
      661 agcgcaaggc gcgcatggag cgcttcggcc agagcgcacg cggacagaag cccggcggca
      721 gcggtcagga cggccagcca gggcagtcga aaccgggcgg cggcgagctc aggatcggcc
      781 gcggcggcgg cggtatcgaa atccccggcg cctccacgac gacgcaaggt gcgccgggcc
      841 aaagcgccaa tcaagacggc agcggcgacg gtccgagcca gcccgggcaa ggctatggca
      901 acggccatga tccgaacctc acgggcgacc gtagtcacgt cgccggccag acgcacgacg
      961 tgagcgccgc cggcatcgac agcggcgagg gcacggcgag cgcggaggtc atctacggcg
     1021 cggctcagcg cggcttcgtc ggcaagggtt acaaggacgt cttcaccgag tatcagtcgg
     1081 ttgccgagca ggtgatcgac aaagacgaaa tcccgcccgg ttaccgcttc tacgtgcgcc
     1141 gctattttca gctgattcgg ccccgcgagt aggcgtcgcc gagccacccc gagaaagaat
     1201 catgagcgag ctagaccaag cgcgagacga aatcgtcgag tttcaaaaga agctcggcac
     1261 gatgcgtgag gagatcggca aagtcatcgt gggacagcgc gcggtggtgg acggcgtgct
     1321 cacgtgcctg ctcgccgggt cgcacgcttt gctcgaaggc gtgccggggc tcggcaagac
     1381 gatgctcgtg cgcacgctcg cgcaaacgct cggcctcgag ttttcgcgca ttcagttcac
     1441 gcccgatctc atgcccgccg acgtgatcgg cacggtcgtg ctcgacgaag gcgcccaggg
     1501 cggcaaagtg ttcgagtttc gcaaaggtcc gattttctct aacctcgtgc tcgccgacga
     1561 gatcaaccgc gcgacgccga agacgcagag cgcgctgctc gaagccatgc aggaacagcg
     1621 cgtgaccgtg gggcgcacga cgcaccggct cgaagcgccg tatttcgtgc tcgcgacgca
     1681 aaaccccctc gaaatggagg gtacctaccc gctgcccgaa gcgcagctcg atcgcttctt
     1741 cttcaagctc gaggtgccgt ttccgacgcg tgaggagctc cacgccatcg tcgatcgcac
     1801 gacgagcgac cagcacgccg aggcacacac cgtcgcgagc cgcgccgaaa ttctcgcgct
     1861 gcaggcgctc gtgcggcg
//
LOCUS       DATIML010000658         6436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3309903, whole genome shotgun sequence.
ACCESSION   DATIML010000658 DATIML010000000
VERSION     DATIML010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6436
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3309903"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..606)
                     /locus_tag="VLJ38_11265"
     CDS             complement(<1..606)
                     /locus_tag="VLJ38_11265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40145.1"
                     /translation="MASAAVVGFEDVHAAVSWRRAHEELVRLSAKRAGLEEGRWLLRA
                     FRSGAHRELGYGSFHEYTERLFGYAPRLTQEKLRVAEALEALPDTAEELKAGTLSFSA
                     VRELTRVAVRATEREWLRAARGRTVREVEELVSGHRAGSRPGDVPDPSVRRHVLRFEV
                     SGEALASFREAMAKIRREAGEALDDDAAILLLSRSVLAGTRD"
     gene            complement(1073..1732)
                     /locus_tag="VLJ38_11270"
     CDS             complement(1073..1732)
                     /locus_tag="VLJ38_11270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40146.1"
                     /translation="MNAGKLSSIVRGRLRPRALSYRAVLCACLAAAAVTASCGRWTPA
                     RDYVSQSKTDAASAYQKLLKVFADKGYHVVEQRDGEHYAKVRAHIDENFVSHQSFIAA
                     QVDPAGVVHFTPSGYLVREGKIHKKLASELLDLEYAMRGDVGPQPEPSASASAAPVPP
                     PEAIATASAAPPVVTPPPAPTPPPKAASKPKAATTPAPKATPAPKATAKPNGDDWVPV
                     Q"
     gene            1840..3501
                     /locus_tag="VLJ38_11275"
     CDS             1840..3501
                     /locus_tag="VLJ38_11275"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40147.1"
                     /translation="MLELVPGQIFATDFRVVRPLSQGGMGAVYVVEQLSTQQQRALKL
                     MHPELVRDARLRQRFEQEARIGGQIPSDHIAQVISAGVDPASGTPWLAMELLQGETLA
                     EWIARRTTSAPELFEIYRQLCHAVGAAHERGIVHRDLKPENIFVAVPRQAGLSFFIKV
                     LDFGIAKLSSHHASGGTTTSMGTPLWMAPEQTENGRIGPPADVWALGLIAFALRTQRV
                     YWARSHQEDTTLPALMREILFEPLVPASTRARQLGAPVQLEPGFDAWFARTVNRDPAQ
                     RFPNASEAYGALVSWVSQPSVPLVAATVAYAGPPPELAAYFAGTPPHVVGTPPHVVAA
                     GYAGATARAPVQGVTERGVSDTLHEPVRRRGGTAALAALGAVTVAGLAALGWFALRPR
                     PAAAACGPDEIAGADGKCACPAGSAKAVDHCVAVALPACPDGQARKGERGPCRCTNGN
                     EPDTRGQCPQASCSAAADQPAIRAMLKQAEATARERCHAPTPTRNSGSLTVTVAPTGH
                     VVDASVDGPLAASDGARCLSDIFRAMSVACFSGEPVKLKKGISLP"
     gene            3498..4010
                     /locus_tag="VLJ38_11280"
     CDS             3498..4010
                     /locus_tag="VLJ38_11280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40148.1"
                     /translation="MRRLTIFEILCALCAACNEHPKPTPERSPAVVPSASEPQRAAAS
                     SQAASDTTAIPPTFETLKLVLTGTHPPCNAADCHGPGGPNPLQYWVKDDDKLYDTLTR
                     HVSVECGNLPVVTPGHPERSAIVKVLKGPCSSKVPQMPNGCTPEANNCLPAEYVAAIE
                     RWIALGAPRK"
     gene            complement(4041..5108)
                     /locus_tag="VLJ38_11285"
     CDS             complement(4041..5108)
                     /locus_tag="VLJ38_11285"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSU40149.1"
                     /translation="MAKLEIGLDTFGDRTRTLDGKVVPHAQVIRQLVEQAELADRVGL
                     AFIGVGEHHREDFAVSAPEVVLAAIAGRTERIHLGSAVTVLSSDDPIRVFQRFATLDA
                     VSNGRAEVILGRGSFTESFPLFGFELARYEELFDEKLELFAKVRAGTPVTWSGGARPP
                     LENQSIYPPLENGLLRTWIGVGGSPESVVRAARYGFDLMLAIIGGEPARFAPYVALYE
                     EALAKFGFGKRPVGVHSPGHVAETDARAREELWPHFLEQRTKIGAERGWAPPTRAQFE
                     HEAGPRGALFVGSPETVAQKIAATARTLSLSRFDLKYSNGPMPHELMLRSIELMGTKV
                     VPRVHELLAMESAPTAEVRAP"
     gene            5201..>6436
                     /locus_tag="VLJ38_11290"
     CDS             5201..>6436
                     /locus_tag="VLJ38_11290"
                     /inference="COORDINATES: protein motif:HMM:TIGR01840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HSU40150.1"
                     /translation="MRYSLFPLLSGCLLVASPAGAAALAGPISGWASGVPSYVSMYEY
                     VPDKLATNPPILVVAHYCSGNASGVFGEAKTGGIVAAADQYGFILVLPQTSNNCWDVG
                     SSASLTHDGGGDTQAVAEMVKYELTKRSANANRVYITGTSSGAMMTEAMLAVYPEMFK
                     AGAEFSGVPAGCWAVGYSSSNQWSGSCADGQVSHTAQEWGDLARKMEPNYSGPRPRVQ
                     LWHGLSDPTISPNNQTEAIKEWTNVLGLAATPTATTNVSLSNHQWTRQTWQDSCGLTV
                     LDAWSETNGPHGTDANLNAMYVIPFLGLDKAGDTDPQQCGSAGMGGAGGTGGAGAAGA
                     AAGGASAGGRGGGRGGSAGMANALGGRGGTSSIGSGGVAAAGSAGGPSGGGSAGENVA
                     GRVGASGTGGLAGQSTGGGG"
BASE COUNT         1004 a         2171 c         2225 g         1036 t
ORIGIN      
        1 gtcccgcgtg cctgcgagga cgctgcgact gaggagcaag atggccgcgt cgtcgtcgag
       61 tgcttcgccc gcttcgcgcc gaatcttggc catcgcttcg cgaaagctcg cgagcgcttc
      121 gccggagact tcgaagcgga gcacgtgacg cctgacgctc gggtccggga catcgcccgg
      181 gcggcttccg gcacgatgtc ccgacacgag ctcttccacc tcgcgcaccg tgcgcccccg
      241 cgctgctcga agccactcgc gctcggtcgc tcggactgcc acccgcgtga gctcccgtac
      301 cgcggagaag ctgagggtcc ccgccttgag ctcttcggct gtgtcgggca gcgcttcgag
      361 tgcctcagcg acccggagct tctcctgcgt gaggcgcggg gcgtagccga agagccgctc
      421 cgtgtactcg tgaaaggagc cgtacccgag ctcgcgatgg gctcccgagc ggaaggcccg
      481 cagcagccag cgcccttcct cgaggcccgc gcgcttcgcc gagagtcgaa cgagctcttc
      541 gtgagcgcgg cgccaggaga cggcagcgtg aacgtcctcg aatccgacta ccgctgctga
      601 tgccatctca acccctccct gctcgtgctt ctgagtcgca cgatctgtat cacgcacttt
      661 ttcggcttcg cgtgccccgc gctgcgcgcg tttgcgggcc tcggacggcg gtcgaaacgt
      721 cgatgccgcg aaacgcgcgc tccatcgaac agacgagcgc gctgacgcta ttcagagctc
      781 gtcgaacaga cgcgtgcact tggttggccg aaatctgtct acataaatca acggactacc
      841 tgctctttcc gcccctgcgc gagctcgttg caacactaca acgcaaaggc tcgggctgtt
      901 gctcggtgaa cagtgaatga cgcatgtcgt gcagttccgc gccgtcgcgt gcgcgcgcct
      961 ttcgcacccc ccacgccgcc gcgcgatgtc gtcacgccgc cgctccgatg ccgctcgatg
     1021 tcgtcgcgcc cccgcgcccg cgaagcgggc gcttggcggg cgactgcgag agctattgaa
     1081 cggggaccca gtcgtccccg ttcggcttgg ctgtcgcttt gggcgcgggc gtcgccttcg
     1141 gcgcgggcgt ggtcgccgct ttcggtttgc tcgcggcttt gggcggggga gttggcgcag
     1201 gcggtggcgt cacgacgggg ggcgctgcgc tcgcggtcgc gatcgcctcg ggcggaggca
     1261 cgggcgcggc cgaggcggag gccgagggct ccggctgcgg ccccacgtcg ccacgcatcg
     1321 cgtactcgag atcgagcagc tcgctcgcga gcttcttgtg gatcttgcct tcgcgcacga
     1381 ggtagccgga aggggtgaag tgaacgacgc ctgccgggtc gacttgcgcc gcgatgaagg
     1441 actggtgcga tacgaagttc tcgtcgatgt gcgcgcgcac cttggcgtag tgctcgccgt
     1501 cgcgctgctc gacgacgtgg tagcccttgt cagcgaagac cttgagtagc ttctggtacg
     1561 cgctcgccgc gtccgtcttg ctctgcgaca cgtaatcgcg cgccggcgtc cagcgaccgc
     1621 agctcgccgt gacggccgcc gccgcgagac acgcgcacaa aaccgcgcga tacgagagcg
     1681 cgcggggtcg aagtcggcct cggacaatcg atgaaagctt gcctgcgttc acggtgcgct
     1741 cgctccttcg tctcatagtt tgggcgctcg gtcgaggccg agcggctctc ggattcatcg
     1801 ctggtccgaa actggctttt gggttagacg taggagaggg tgcttgagct cgttcccggg
     1861 cagatcttcg cgacggactt tcgcgtcgtg aggccgctca gtcagggcgg gatgggggcg
     1921 gtctacgtgg tcgagcaatt gagcacccag cagcagcggg cgctcaagct catgcacccc
     1981 gagctcgtgc gcgacgcgcg tttgcgccag cgtttcgagc aggaagcacg catcggcgga
     2041 cagatcccga gcgatcacat cgcgcaggtg atctcggcgg gcgtcgatcc cgcgtctgga
     2101 acgccctggc tcgcgatgga gctcttgcag ggcgagacgc tcgcggagtg gatcgcgcgc
     2161 cggacgactt cggccccgga gctcttcgaa atctaccggc agctctgcca tgccgtcggc
     2221 gccgcgcacg agcgcggcat cgtccatcgc gatctcaaac ccgagaacat tttcgtcgcc
     2281 gtgccgcgac aggccggact ctcgttcttc atcaaggtgc tcgatttcgg catcgcgaag
     2341 ctttcgtcac atcacgcctc cggcggcacg acgacgtcga tgggcacgcc gctctggatg
     2401 gcgcccgagc agacggaaaa tggacgtatc ggtccgcccg cggacgtgtg ggcgctcggg
     2461 ctgattgcgt tcgcgctccg cacgcagcgc gtgtactggg cgcgcagcca tcaggaggac
     2521 acgacgctgc cggcgttgat gcgcgaaatt ttgttcgagc cgctcgtgcc ggcgtcgacg
     2581 cgcgcgcgcc agctcggcgc gcccgtgcag ctggagccgg gcttcgacgc gtggttcgcg
     2641 cgcaccgtga atcgtgatcc ggcgcagcgc tttccgaacg cgagcgaagc gtacggcgcg
     2701 ctcgtgagct gggtctcgca gccttccgtg ccgctcgttg ccgccacggt ggcgtacgct
     2761 gggccaccgc ccgagctcgc ggcgtacttc gcgggcacgc cgccgcacgt cgtgggcacg
     2821 ccgccgcacg tcgtggcggc aggttatgcc ggtgcgaccg ctcgcgctcc ggtgcagggc
     2881 gtcaccgagc gcggcgtctc ggacacgctg cacgagcccg tgcggcgtcg tggcggcacg
     2941 gcagcgctcg ccgcgttggg agccgtgacg gtggcgggac tcgccgcgct cggctggttt
     3001 gcgctgcgcc cacgcccagc cgccgccgcg tgcgggcccg acgaaatcgc cggtgccgac
     3061 ggcaagtgcg cctgcccagc gggctcggcc aaagccgtcg accattgtgt ggcggtagcg
     3121 ttgcccgcgt gtccggacgg ccaagcgcgc aaaggcgaac gcggcccatg ccgctgcacg
     3181 aacggcaacg agccggatac acggggtcaa tgcccgcaag cctcctgcag cgcagccgcc
     3241 gatcaaccgg cgatccgcgc catgctcaag caagccgagg ccacggctcg agaacgctgt
     3301 cacgccccga cacccacccg caactccggc agcttgaccg ttaccgtcgc gccgacgggt
     3361 cacgtcgtgg atgcaagcgt ggacggcccg ctcgcggcta gcgacggcgc gcgctgcctc
     3421 agcgacattt ttcgcgcaat gagcgttgcc tgcttcagcg gcgagcccgt gaagttgaaa
     3481 aagggcattt cgctgccgtg aggcggctca ccattttcga aattttgtgc gcgctctgcg
     3541 ccgcctgcaa cgagcaccca aagccgacgc ctgagcgctc ccctgccgtg gtgccgagcg
     3601 cgagcgaacc ccagcgcgcc gcagccagca gccaggcggc gagtgacacg acggccatcc
     3661 cgccgacctt cgagacgcta aagctcgtcc tcaccggcac gcacccgccg tgcaacgccg
     3721 ccgactgcca tggtcccggc ggcccgaatc cacttcagta ttgggtcaaa gacgacgaca
     3781 aactttacga caccctcaca cgccacgtct cggtcgagtg cggcaacctc cccgtcgtca
     3841 cgcctggtca ccccgagcga agcgccatcg tcaaagtgct caaagggccg tgcagcagca
     3901 aggtcccgca aatgccgaac ggctgcacgc ccgaggcgaa caactgctta ccggcagaat
     3961 acgtcgccgc catcgagcgc tggatcgcac tcggcgcgcc gcgaaagtag gcgcgccggg
     4021 cgtcccgaga ccgccccagg ttacggagcg cgtacttccg ccgtcggcgc gctctccatc
     4081 gcgagcagct cgtgcacgcg cgggaccacc ttggtgccca tgagctcgat gctcctcagc
     4141 atgagctcgt gcggcatcgg gccgttgctg tacttcaggt cgaagcgtga gagcgacagc
     4201 gtgcgggccg tcgccgcgat tttttgcgcg acggtctcgg gtgagccgac gaagagcgcg
     4261 ccgcggggtc ccgcttcgtg ctcgaactga gcgcgggtgg gcggcgccca gccgcgttcg
     4321 gcgccgattt tggtgcgctg ttcgagaaag tgcggccaga gctcctcacg tgcccgcgcg
     4381 tccgtttcgg cgacgtgacc cggcgagtgc acgccgaccg ggcgcttgcc gaagccgaac
     4441 ttcgcgaggg cctcttcgta gagcgcgacg tacggcgcga agcgggcggg ctcgccgccg
     4501 atgatggcga gcatcagatc gaagccgtag cgcgcggcgc gcacgaccga ctcggggcta
     4561 ccgccgacgc cgatccacgt gcgcagcagg ccgttttcga gcggcgggta gatgctctgg
     4621 ttttcgagcg gcggacgcgc cccgccggac caggtcacgg gtgtgccggc gcgcactttg
     4681 gcgaagagct cgagcttttc gtcgaagagc tcctcgtagc gggcgagctc gaaaccgaag
     4741 agcggaaagg actccgtgaa cgagccgcgc ccgaggatca cttcggcgcg gccattcgac
     4801 acggcgtcga gcgttgcgaa gcgttgaaac acccggatgg gatcgtcgga gctcaacacc
     4861 gtcacggccg aacccaggtg gatgcgctcg gtgcggcccg cgatcgccgc cagcacgact
     4921 tcgggcgccg acacggcaaa atcctcgcgg tggtgctccc cgaccccgat gaacgcaagc
     4981 ccgacacgat cagcgagctc ggcctgttcg accagctggc gaatcacctg cgcgtgaggc
     5041 acgaccttgc cgtcgagggt ccgcgtccga tcgccgaaag tatcgagacc gatttcgagc
     5101 ttggccataa aagtacaagc taaccagtct ggcgctctcg tccagctccc gccggccgcg
     5161 attttggacg gaagacgccg catcgagcaa ctgcttcggc atgcgctatt ccctctttcc
     5221 gctcctgagc ggctgcttgc tcgtcgcttc gccggctggg gccgcggcgt tggcggggcc
     5281 gatcagcggc tgggcgagtg gcgtgccgag ctacgtttcg atgtacgagt acgtcccgga
     5341 caagctcgcg acgaacccgc cgatcctcgt cgtcgctcac tactgcagcg gcaatgcctc
     5401 cggggtgttc ggtgaggcga agaccggggg catcgtcgcg gcggcggatc agtacggttt
     5461 catcctggtc ctgccgcaga cctcgaacaa ttgctgggac gtgggctcga gcgcgtcgct
     5521 cacgcacgac ggtggcggcg acacgcaagc cgtcgcggag atggtgaagt acgagctcac
     5581 gaagcgcagc gcgaacgcga atcgcgtcta catcaccggc acgtcgtccg gagccatgat
     5641 gacggaggcg atgctcgccg tttaccccga gatgttcaag gcgggcgcgg agttttctgg
     5701 agttccagcc gggtgctggg ccgtcggtta cagctcgagc aaccagtgga gtggctcgtg
     5761 cgccgacggt caagtgtcgc atacggctca ggagtggggg gatctcgcgc ggaaaatgga
     5821 gcccaattac agcgggcccc gcccgcgggt tcagctctgg cacggcttga gcgaccccac
     5881 catcagtccc aacaatcaga ccgaagccat caaggaatgg acgaacgtgc tcgggctcgc
     5941 cgccactccg acggcgacca cgaacgtgtc cctttcgaat caccagtgga cgcgtcaaac
     6001 ctggcaggac agctgcgggc tcaccgtgct cgacgcgtgg tcggaaacga acggcccgca
     6061 cggcaccgac gcgaacctga acgccatgta cgtgatcccg tttctcgggc tggataaggc
     6121 aggcgatacc gatcctcagc agtgcggctc ggctggtatg ggcggcgccg gcgggacggg
     6181 cggcgcggga gctgcgggtg ctgctgcggg cggcgcgagc gcgggcgggc gtggcggtgg
     6241 tcgtggcggc agcgccggca tggcgaacgc gctaggcgga cgcggtggca cgagcagcat
     6301 cggttcgggg ggggtggcgg ccgcaggttc tgcgggcggg ccaagcggcg gcgggagcgc
     6361 gggcgaaaat gtcgccgggc gtgtgggcgc gtccggtacg ggtggccttg cgggacaaag
     6421 tacgggcggc ggtggc
//
LOCUS       DATIML010000659         2730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4465028, whole genome shotgun sequence.
ACCESSION   DATIML010000659 DATIML010000000
VERSION     DATIML010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4465028"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VLJ38_11295"
     CDS             complement(<1..400)
                     /locus_tag="VLJ38_11295"
                     /inference="COORDINATES: protein motif:HMM:NF025244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4202 domain-containing protein"
                     /protein_id="HSU40151.1"
                     /translation="MNGADPVREDVAGVSRPRLLVQAERLAAWVERLEPHASEALRLA
                     AHCQHLERWKIARGEFPEGRAGYLQWRTRLGRYHAERARDVLASLGYEDETVRAVETI
                     VTKQHLRSNPDSQTMEDALCLVFLEYEFEDF"
     gene            531..1514
                     /locus_tag="VLJ38_11300"
     CDS             531..1514
                     /locus_tag="VLJ38_11300"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSU40152.1"
                     /translation="MQYRELGRTGFRVSSVSFGAWAIGGTWGEVDDAESIAALHRALD
                     RGVNFFDTADVYGDGRSERLLRQLRSERKEPFYVTTKAGRRANPHGPAAYNRENLTQW
                     IERSLTNLGVEALDLLQLHCPPTEVYYRPEVFGILDDLVKAGKLRNYGVSVERVEEAL
                     KAIEFPGVQSIQIIFNLFRQRPADLFFEQAKRKRVGILARVPLSSGLLGGKLKRDTSF
                     AADDHRRFNRHGEAFDRGETFSGVDYDFALGVVEKFKALVPPGSTLPELALRWILSFD
                     AVTCAIPGAKRPSQVEENVKAADAGPLPEPLLRELSAIYERDVKALVHQYW"
     gene            complement(1582..2610)
                     /locus_tag="VLJ38_11305"
     CDS             complement(1582..2610)
                     /locus_tag="VLJ38_11305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40153.1"
                     /translation="MSMQRTWSILAAGFLAAGCAAAGKPEPQHGGDERTPPATEEQNA
                     FPGEAAPATEAPPTAPESSNDDFSPEPGNDEAGSRAAAPAPEARNEAGGADMQRYQES
                     SHASRGAAPAKKSARPLDFEPERPGLGTTWGETRTSRVSNAPFERSSSNPFSLTSIHY
                     NDSSGVAALLHDASPVAYRTDMATVVSNGAVTVRLVDANGSPLPTFTTASGALVQGDV
                     GQRYQIELVNETSSRFEAVVTVDGLDVIDGRPGAFSKRGYLLEPFATVDIDGFRQNME
                     QVAAFRFGSVRGSYAARKGNDRNVGVVGVALFAERGASGPWSERELRRRETADPFPGR
                     FAAPPIAR"
BASE COUNT          423 a          940 c          899 g          468 t
ORIGIN      
        1 gaaagtcctc gaactcatac tcgaggaaaa ccaggcaaag cgcgtcctcc atcgtttgcg
       61 agtcgggatt cgaacgcaaa tgttgcttcg tgacgatggt ctcgacggcg cggacggtct
      121 cgtcttcgta gccgagactc gcgagcacgt cgcgcgcgcg ctcggcgtga tagcggccga
      181 gccgcgtgcg ccactgcaga taaccggcgc gcccttcggg aaactcaccg cgcgcgattt
      241 tccagcgctc caggtgctgg caatgcgcgg cgaggcgcag cgcctcgctc gcgtgcggct
      301 cgagccgctc cacccacgcg gccagccgtt ccgcctgaac gagcaggcgc ggccgtgaca
      361 cgcctgcgac gtcttcacgc acgggatcgg cgccgttcaa ctcgctgaac gtttggatcg
      421 ctttttcgaa tcgcgtcgcc agagcccggc cattgtaccc gccgagcctg ccaaagactg
      481 gcgaagtagt actcgttgtg ccctcgctcg cgctgccgta ggcaatccgc atgcaatatc
      541 gcgaacttgg acggaccggc ttccgcgttt ccagcgtcag cttcggcgcc tgggcgatcg
      601 gcggcacctg gggcgaggtc gacgacgccg agtcgatcgc ggcgctgcat cgcgcgctcg
      661 atcgcggcgt caatttcttc gacacggccg acgtgtacgg tgacggtcgc agcgagcgcc
      721 tgctccggca gctcaggagc gaacgcaaag agccgtttta cgtcacgacc aaggccggtc
      781 gccgcgcgaa cccgcacggt ccggctgcgt acaatcgcga aaacctcacg cagtggatcg
      841 agcggagcct gacgaacctc ggcgtggagg cgctcgacct gcttcaactc cactgcccgc
      901 cgacggaagt ctattaccgc cccgaagtct tcggcatcct cgacgacctc gtgaaggctg
      961 ggaagctccg caactacggc gtcagcgtcg agcgcgtcga ggaagcgctc aaggccatcg
     1021 agttccccgg cgtgcagtcg attcaaatca tcttcaacct gtttcgtcag cgcccggctg
     1081 atttgttctt cgagcaggcc aagcgaaaac gcgtcggcat tctcgcgcgc gtgccgcttt
     1141 cttcggggct gctcggcggc aagctcaagc gcgacacatc gttcgccgcg gacgaccacc
     1201 gccgcttcaa ccgtcacggc gaggcattcg atcgaggcga gacgttttcc ggcgtcgatt
     1261 acgactttgc gctcggcgtc gtcgaaaagt tcaaggcgct cgttccgccg ggcagcacct
     1321 tgcccgagct cgcgctgcgc tggattttga gcttcgacgc cgtcacctgc gcgatccccg
     1381 gggcgaagcg gccgtcgcaa gtcgaagaga acgtgaaggc ggccgacgcc ggtccgttgc
     1441 ccgagccgct cctgcgcgag ctttctgcca tctacgagcg cgacgtgaaa gcgctcgtgc
     1501 atcaatactg gtgaggcgcg gcagcccggc tccgctcgtg cggaccgggc cgtcactgtc
     1561 gctgccgccg cgccatccac gtcagcgcgc gatgggcggc gccgcgaagc ggcccgggaa
     1621 cggatcggcc gtctcgcggc ggcggagctc acgttcgctc caggggccgc tcgcgccccg
     1681 ttcggcgaac agcgcgacac cgaccacgcc gacgttgcga tcgttgccct tccgcgccgc
     1741 gtacgagccg cgcacgctgc cgaaacgaaa cgccgccact tgctccatgt tttggcggaa
     1801 gccgtcgatg tcgaccgtcg cgaacggctc tagcaggtag ccgcgcttcg agaacgcgcc
     1861 cggccggccg tcgatcacgt cgagtccgtc gaccgtcacg accgcctcga agcgactcga
     1921 cgtttcgttg acgagctcga tctggtagcg ctgccccacg tcgccctgaa cgagcgcgcc
     1981 gctcgcggtc gtgaaagtcg gcagcgggct gccgttcgca tcgaccaacc gcaccgtcac
     2041 ggccccgttg ctcacgacgg tcgccatgtc cgtgcgatag gcgactgggg acgcgtcgtg
     2101 cagcagcgcg gcgacgccgg acgagtcgtt gtagtgaatg ctggtgagcg agaacgggtt
     2161 cgagctcgag cgctcgaagg gcgcgttcga gacgcggctc gtgcgcgtct caccccaagt
     2221 ggtgccgagt cccggccgct cgggttcgaa atcgaggggg cgcgccgatt ttttcgccgg
     2281 cgcggcgccg cggctcgcgt gggagctctc ttggtagcgt tgcatgtccg cgccgccggc
     2341 ctcgttgcga gcctccggtg ccggagcggc cgcccggctc cccgcctcgt cgttgccggg
     2401 ctcggggctg aaatcgtcgt tcgagctctc gggcgcggtc ggtggcgcct cggttgcggg
     2461 cgctgcttcc cccggaaaag cattctgctc ttcggtcgcg ggcggcgtcc gctcgtcgcc
     2521 gccgtgttgc ggctcgggtt ttcccgccgc ggcacagccc gctgccaaaa atcccgccgc
     2581 taagatcgac caagtacgct gcatgctcat cgccattcct ccaggttgag gagagaacga
     2641 gcgacgcggc gggagcttac agggtcgtcg ccgcgccgag cggaagaggg tttccgctag
     2701 cgtcgaaatc gacttggccg ctcagacgtg
//
LOCUS       DATIML010000660         2909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1580223, whole genome shotgun sequence.
ACCESSION   DATIML010000660 DATIML010000000
VERSION     DATIML010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580223"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1204
                     /locus_tag="VLJ38_11310"
     CDS             <1..1204
                     /locus_tag="VLJ38_11310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40154.1"
                     /translation="IPVDLLEGDDPGAAAPAPPSAPPEPAVEPDAPPRPKPKPKPKPK
                     DAGAPDAEPPDAEVPDAEAQDAALDAGLADAAATDGAADAAVTDGGIANADGGSPNPM
                     AGLVGEAKKVIDQDANVRLVIYPEKIRNHPLAPRIGQLLASIYQWRDFFGPSKLDPIR
                     DVDRLMVVGPELRDSSKVAAIIQHNVGASRMHEALDAIVHADPDHGEWLDAGTPAATA
                     YADRAPRVLVMPSPNVVVVVPPTLKDVALSLKRVRVPKPTGSEVMWAYAVTPWRAARS
                     AGVALPHTLAWAKIWVTPSEGGGAVVEAEAEDDSPESATKHAEELNAQVQDALSMAAS
                     FSLLGQVLLGTRATRLVESVELHADGNKIRGTATLTEEQIERLLEQVRGLLVERRATT
                     PRRDAGAP"
     gene            complement(1244..2461)
                     /locus_tag="VLJ38_11315"
     CDS             complement(1244..2461)
                     /locus_tag="VLJ38_11315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40155.1"
                     /translation="MSYAPVPAEVVSAIKDHPHLEAIVRFVRRTAMDAAEHRRQNFAS
                     RTPDGRAEALPALPEGLTSSDFNTAFGNVAELIGKGVTTATEALLIGVLLALSLREEA
                     PSVDEEQTLVAHMAWLAAHTPCDALLAFDAAVGERAGLWRAVARIAVEPVEVAPDFGR
                     TEALLAAATLGSALSPASAPPRTRALAQVDDPGVRALLALGGLAREPLLGELLPPPFG
                     PVTTAVLALTFVLGALQLARLIARLAFGYRRPASFTLTERGLELTHRTELLGRVLKEQ
                     TLLVPLANLASVTREVQYPRAGLYAGLAALVIGTYFGMGLFVDALRVPGGSSSLMAMA
                     VALIVGGLAIDFVLSSGIDTMRGRCHLLVEPRKGRTICIGAIDPLQADAMLASITAVA
                     SGASVPSLLPPPA"
     gene            complement(2567..>2909)
                     /gene="panD"
                     /locus_tag="VLJ38_11320"
     CDS             complement(2567..>2909)
                     /gene="panD"
                     /locus_tag="VLJ38_11320"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HSU40156.1"
                     /translation="EGSVTIDRDLMDAANILPFEAVHIWNATSGTRLVTYALEGPRGS
                     GAICVNGAAAHLNKPGDVVILATFADMAPEEARDYRPTVVRVDAKNRVVHAGDAAEKP
                     GPILDSLGILS"
BASE COUNT          479 a         1007 c         1025 g          398 t
ORIGIN      
        1 catccccgtc gacttgctcg agggagacga ccctggtgcg gccgctccgg cgccgccgag
       61 cgccccgccg gagccggcgg tcgagcccga cgcgcccccc cggccgaagc ccaaacccaa
      121 gcccaaaccc aaggatgccg gggcgccgga cgccgagccg cccgacgccg aagtacccga
      181 tgcagaagcc caggatgccg cgctcgatgc cggcttggcc gacgccgcgg cgacggatgg
      241 ggcggccgac gcggctgtca cggacggcgg catcgcgaat gccgacggcg gcagtccgaa
      301 cccgatggct gggctcgtcg gcgaagccaa aaaggtcatc gaccaggacg ccaacgtccg
      361 gctcgtcatc taccccgaaa agatccgcaa tcatccgctt gcgccgcgca tcgggcaact
      421 gctcgcgtcg atttaccagt ggcgcgactt tttcggcccg tcgaagctcg atcccatccg
      481 cgacgttgac cgtctcatgg tcgtcggtcc cgagctgcgc gattcgagca aagtcgccgc
      541 tatcattcag cacaacgtgg gcgcgtcccg catgcacgaa gcactcgacg cgatcgtgca
      601 tgcggatccc gaccacggtg agtggctcga cgcgggcacg ccggctgcga cggcctacgc
      661 cgatcgagcg ccgcgcgtgc tcgtgatgcc gtcgccgaac gtcgtcgtgg tcgtgccgcc
      721 gaccttgaag gacgtggcgc tgtcgctcaa gcgcgtccgc gtccccaagc cgaccggctc
      781 cgaggtcatg tgggcctacg cggtcacgcc ctggcgcgcg gctcgttcgg ccggagtcgc
      841 gctgccgcat accctggctt gggccaaaat ttgggtcacc ccgagcgagg ggggcggcgc
      901 cgtggtcgaa gccgaagccg aggacgacag tccagagagc gcgaccaagc acgccgagga
      961 gctcaacgca caagtccagg acgcgctgtc gatggcggct tcgttcagct tgctcgggca
     1021 ggtgctgctc ggcacgcgcg cgacgcgcct ggtcgagagc gtcgagctcc acgccgacgg
     1081 caacaagatc cgcggcacgg cgaccctcac cgaagagcaa atcgagcggc tgctcgaaca
     1141 ggtgcgcggc ttgctcgtcg aacggcgcgc cacgactccg cgccgcgacg ccggagcgcc
     1201 ctgagcgtcg cgccgcgacg cgtccacgcc gacggtcgtc cgttcaagcg gggggcggca
     1261 agaggctcgg cacgctcgct ccactcgcca cggcggtgat gctcgcgagc atggcgtccg
     1321 cctgcaacgg gtcgatcgct ccgatgcaaa tggtgcggcc cttgcgcggc tcgacgagca
     1381 agtgacagcg gccgcgcatc gtgtcgatac cgctcgacag cacgaaatcg atcgcgaggc
     1441 cgccgacgat cagcgcgact gccatcgcca tgagcgagct cgagccgccc gggacgcgca
     1501 gggcatcgac gaacagcccc ataccgaaat aggtaccgat cacgagcgcg gcgagccccg
     1561 cgtacagtcc ggcgcgcggg tactgcacct cgcgcgtcac gctcgcgaga ttggcgaggg
     1621 ggacgagcag cgtttgctcc ttgagcacgc ggccgagcag ctccgttcgg tgagtgagct
     1681 cgaggccgcg ttcggtgagc gtgaacgagg caggccggcg atagccgaag gcgaggcgcg
     1741 cgatcaggcg cgcgagctgc aaggcgccaa gcacgaaggt cagcgcgagc acggcggtcg
     1801 tcacgggacc gaacggaggc ggcaggagct cgccgaggag cggttcgcgc gcgaggccgc
     1861 cgagcgcgag gagcgcacgg acgccgggat catcgacttg ggcgagcgcg cgcgtgcgcg
     1921 gcggcgccga agcgggcgag agagcagagc cgagcgtcgc ggcggcgagc agggcttcgg
     1981 tgcggccgaa atcgggcgct acctcgacgg gctcgacggc gattcgcgcg acggcgcgcc
     2041 aaaggcccgc gcgttccccg acggccgcgt cgaacgcgag caaggcgtca cacggcgtgt
     2101 gcgcggcgag ccacgccatg tgcgcgacga gcgtctgctc ttcgtccacg gatggagctt
     2161 cctcgcgtag cgagagcgcg agcaggacac cgatcaggag cgcctcggtg gcggtcgtca
     2221 cgcccttgcc gatgagctcg gcgacgttgc cgaacgcggt gttgaagtcc gagctcgtga
     2281 gcccttcggg tagagcgggc agcgcctcgg cgcgaccgtc cggagtccga gaagcgaaat
     2341 tttgccggcg atgctcggcc gcgtccattg ccgtgcgccg cacgaagcgc acgatcgcct
     2401 ccaggtgcgg atggtccttg atggccgaga ccacctcggc cgggacgggc gcgtacgaca
     2461 tcggatcgaa cccatgcctc tagccgaatt cgctccttct aggccactat ggcgtgccgt
     2521 gaggccacga tggcgtgctg cacggcgccg atccgagccg ttcggctcag ctcaggatgc
     2581 cgagcgaatc gaggatgggg ccgggttttt ccgcagcatc tccggcgtgt acgacgcgat
     2641 tcttcgcgtc gactcgcacc accgtcggcc gataatcccg cgcctcttcc ggcgccatgt
     2701 cagcgaaggt cgcgaggatc acgacgtcgc cgggcttgtt caggtgcgcc gccgcgccat
     2761 tcacgcagat ggcaccgctg ccgcgcggcc cctcgagtgc gtaagtgacg aggcgcgtgc
     2821 cgctcgtcgc gttccagatg tgcaccgcct cgaacggcag gatattcgcc gcgtccatca
     2881 ggtcgcggtc gattgtgaca ctgccttcg
//
LOCUS       DATIML010000661        11956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2442544, whole genome shotgun sequence.
ACCESSION   DATIML010000661 DATIML010000000
VERSION     DATIML010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 11956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11956
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2442544"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VLJ38_11325"
     CDS             complement(<1..494)
                     /locus_tag="VLJ38_11325"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HSU40157.1"
                     /translation="MIPAEATGPSLYDLPIQLVDRTGTTRPLAAFRGAPLLVTMFYGS
                     CASACPLLTSDLKRIERQLPAGVRDQVRVLMVSFDQARDTPPVLERMTIERGMDPARW
                     TLASAADDDARSLAGVLGIRYRKLDTGEFFHSSAIVLLDRDGRVRARLDGLGRDAAAI
                     VSFLS"
     gene            complement(617..1426)
                     /locus_tag="VLJ38_11330"
     CDS             complement(617..1426)
                     /locus_tag="VLJ38_11330"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HSU40158.1"
                     /translation="MSSRCFARVLALVSALACAAHAAPRPLKAPVGMVVVGPGVYRPL
                     YPASPAEKLVSVRRFYLDAKPVTNGAFLDFVRENPAWRRDRAQRLFADDGYLKHWSAV
                     DALGPEVRPTSPVTNVSWFAAKAYCAARAARLPSEREWELAALASESARDASTDPAFV
                     ARILDFYSRPALASLRDVGGGKPNLYGVYDLHGLVWEWIYDFSASLVAVDSREKGEAD
                     RNRFCGANGASAQTPSDYAAFMRVAFRSSLEASYTTARLGFRCAADVEETP"
     gene            complement(1426..2832)
                     /gene="nirK"
                     /locus_tag="VLJ38_11335"
     CDS             complement(1426..2832)
                     /gene="nirK"
                     /locus_tag="VLJ38_11335"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HSU40159.1"
                     /translation="MGAWQRHFTEHPAPPPDVTSVPSDDRIMAVLTSPPNVPPPTNRT
                     KPARVVVKLTVKEVVLPMADGVQYSYWTFGGTVPGSFIRVRQGDVVEFHLQNDATSTM
                     PHNIDLHAVTGPGGGAASSFTAPGHASQFTFRALNPGLFVYHCATAPVPMHVANGMYG
                     LILVEPPGGLPPVDREYYVMQGDFYTKGKYHAKGLQAFDMDKGIDERPTYVVFNGAEG
                     ALLGDKSLKAYVGDSVRIYFGVGGPNLTSSFHVIGEVFDRVYTEGGTHYQENVQTTMV
                     PAGGSAILDFRVQVPGAYALVDHSLFRAFNQGAVGTLKVSGPEDKLLYSGKQEDSLAQ
                     AEEAPKAAVLAESAAVSTLTRDERIAAGKTLFASTCSACHQATGSGLPGSIPPLAGSD
                     FLVKNDKERVLGVVLNGLSGPVKVNGASFNSVMPTWNHLTNDELANVITYVLNSWGNP
                     GGEVTPAEIAKVRGSGAI"
     gene            3220..3753
                     /locus_tag="VLJ38_11340"
     CDS             3220..3753
                     /locus_tag="VLJ38_11340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40160.1"
                     /translation="MLGGTLVDGMLRTSMNAATLLVAAVVALASVGGAAATHRRVRSR
                     GSLQLAAALVLAVAGAPIEAAAGAPFATLLVSAGVKSVVFISSVLVVRAALATSGKNG
                     SSRGRRLYLMASALALAGASALTAAHRAPEAIVCVLATGSILLSAHRRPTAKDLKPLG
                     LWLTALTLLTTLAPLFP"
     gene            complement(5000..6265)
                     /locus_tag="VLJ38_11345"
     CDS             complement(5000..6265)
                     /locus_tag="VLJ38_11345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40161.1"
                     /translation="MRRELNEIEYLNWCVEQPYNMVVAVRVRGAVTPLELRSALDRAQ
                     RRHPLLGVNTEIGANRLPYFVSEGVGPIPLAVIEHAEPDAARRLFDSELSARFERDGR
                     EQPRLPLLRVTLLVPNDAGTAVDLVFTVQHVIGDGLSLAYLVRDLLTFIEQPQAPVAV
                     LAAPASAEDLLPPKVRRRLPRSAHFFNAVSWLVKAYSRLRASGATPPAPCVQCHRVWT
                     LSVEQTARLRARCRRERVSVQAAVAAAFFSEFSWIHVPVNLRPFLGRPVGEGFGLFVG
                     AAELRLAYQSQLGFWSNARRCQRRLQRALRDPFAVFRLFSKAVPFERVRELGPLLVKL
                     AGKERAFAITNLGDLDERGLAFNGARVSLESFYGAVSGIVKSNVLTVYTLSGELSLYL
                     LANESSTADCAIRDAAGRAVQLLLTALES"
     gene            complement(6384..7448)
                     /locus_tag="VLJ38_11350"
     CDS             complement(6384..7448)
                     /locus_tag="VLJ38_11350"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HSU40162.1"
                     /translation="MSATPKSQVFALVSLSLLAGCAARPPSTPPANVAVPGVPAPAAS
                     ANAGALLARAKASFGTLPSAAALPAEQVALGRRLFFEPRVSADGKIGCVSCHLPARYA
                     TDGLPRARGVFERENPRNSPTVFNAASQTAEHWRADRDSVEDQARRALLGKPSFGNAT
                     EEEALGRLRALPAPYPDEFHRAFPSDPEPVSIRNWGTAIGAYERTLVTPGPFDAFLTG
                     EDKALSASARAGLTAFMDEGCVQCHDGPLLGGVALRKFGIDVEYAPLTHSNPVDTGRF
                     DVTKDAADRYVFKVAPLRNVARTAPYFHDGSVATLPEAVAIMAQTQLGKRLPAERIDA
                     IVVFLESLTGPVPATFSPPP"
     gene            7530..9455
                     /locus_tag="VLJ38_11355"
     CDS             7530..9455
                     /locus_tag="VLJ38_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HSU40163.1"
                     /translation="MLGLINLGKSFGARTLFEGVSLKLVPEARYGLVGANGSGKTTLL
                     KILAGDEPPSDGSVTLPKTARMGVLRQDRFLDDAEPILSVATAGDEIVTSARREQALL
                     AGDAGANAERILELEDRIAAHDGYTLEARASAILEGLGIPVAEHGRPLATLSGGFKLR
                     VLLAQVLIGGPDVVLLDEPTNHLDILSIRWLEQFLAAYRGTALVISHDEHFLDSVATH
                     ILDVDYGTVTLYTGNYAAFARQKAEVRQRKEAEVARAEANIAEKRAWVERFGAKATKA
                     RQAQSRLKQIERIEVEVLEQTSRRSPAFRFEAERPSGRDVLTLDGISKAYGDKRVLER
                     VSLTVRRGERLAVIGKNGLGKSTLLKVAMGALPPDAGSVTWGYETRVGYFAQDHHEVL
                     ERPDATPFEVIDAALPLDGPSVVRGHLGRVLFSGDDVNKPIAALSGGEAARLVFCRIM
                     VQRPNVLVLDEPTNHLDLESIHALVTALAAFEGTLLFVSHDRAFVSALATRILEVQAG
                     GFNDFPGSYDDFLARAGDDHLDANAVVLRAKQARAAAANGPNQAISWEESKRRANRLK
                     QLPALRDQALAAIEAAEARKAQIQASFCADGFFERTPKERVAALEAEERALGPRIEAL
                     IAEWEALETELGESAAR"
     gene            9550..11166
                     /locus_tag="VLJ38_11360"
     CDS             9550..11166
                     /locus_tag="VLJ38_11360"
                     /inference="COORDINATES: protein motif:HMM:NF000658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HSU40164.1"
                     /translation="MKLEFTNRAWRDLPFDPNEENRTRQVFGACFTRVRPTPVKAPRT
                     LCVAREVAELLDFTPEFTASAEFAEVFAGNRSLPGMDPVAACYGGHQFGTWAGQLGDG
                     RAISLGELKNARGEHWELQLKGAGPTPYSRRADGRAVLRSSLREFLCSEAMHHLGIPT
                     TRALCLVSTGEDVLRDLLYDGNARHEPGAIVCRVAPTFLRFGNFELFAARDDRENLAK
                     LGAHTLTTHFPELGPPSAEAFQQLLGEVSRRTAELMAAWMAKGFVHGVMNTDNMSILG
                     LTIDYGPFGFLDDFAPNWTPNITDASGRRYRYENQPSVALWNLVRLAHALFPLIGDVS
                     AVEAALSAYGDTLTRARSQSLAEKLGLHALREDETRADGTPGVSDATLVDDLFELLAA
                     VETDFTLFFRRLADVKTDPAAGEPSDEVRFAPLRDAYYDPSAVSDDHRSRLLVWLRRY
                     VARVRDDGRPDSERRRAMNAVNPKYVLRNYVAQLAIEAAERGDLSVLSELLDVLRHPF
                     DEQPAHARFAEKRPEWARHRAGCSMLSCSS"
     gene            complement(11314..11595)
                     /locus_tag="VLJ38_11365"
     CDS             complement(11314..11595)
                     /locus_tag="VLJ38_11365"
                     /inference="COORDINATES: protein motif:HMM:NF021009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-type lectin domain-containing protein"
                     /protein_id="HSU40165.1"
                     /translation="MARFDSEQIGWRLLEPNGDAPRSHAARIVFESAFQLAPVVHVGV
                     SGFDIENSDAARLRVRVTHVDQAGFEVELETWLATRVWSVDVSWLAIGS"
BASE COUNT         2011 a         4032 c         3971 g         1942 t
ORIGIN      
        1 gagagaaaac tcacgatcgc agccgcatca cggccgaggc catcgagccg cgcccggacg
       61 cgaccgtcgc gatcgagcag cacgatcgcc gacgagtgga agaactcccc cgtgtcgagc
      121 ttgcgataac ggatgccgag cacgcccgcg agtgagcgcg cgtcgtcgtc cgctgcgctc
      181 gcgagcgtcc agcgagccgg atccatgccg cgctcgatcg tcatgcgttc gagcacgggt
      241 ggagtgtccc gggcctgatc gaagctcacc atcagcacgc gcacctggtc gcgcacaccg
      301 gcagggagct gccgttcgat gcgcttgagg tcgctcgtga gcagcgggca cgccgacgca
      361 cagctgccgt agaacatcgt gacgagcagc ggggcgccgc ggaacgccgc gagcggacgc
      421 gtcgttcccg tgcgatccac gagctgaatc ggcaaatcgt agagtgacgg gccggtcgct
      481 tcggcgggga tcactgggcc tctcccggac tgacttcgcg gcgtgtcaga gctcgaagcg
      541 gcggggacgg gcgccgcggg ctgccggcaa gcgagcagaa aaagtgcgag tgaccacacg
      601 aacggcctac gtcgagtcac ggtgtttcct ccacgtcagc ggcgcagcga aagccgagcc
      661 gcgcggtcgt gtaagacgct tcgagcgagc tacggaacgc gacgcgcatg aacgccgcgt
      721 aatcggacgg cgtttgcgcg ctcgctccgt tcgcgccgca gaagcggttg cgatcggcct
      781 cgcctttttc gcgtgagtcc acggccacga ggctggcgct gaagtcgtaa atccactccc
      841 agaccaaacc gtggagatcg tacacgccat agaggttcgg cttgccaccg cctacgtcac
      901 gcagcgacgc gagggccggc cgcgaataga aatcgaggat gcgcgcgacg aacgccggat
      961 cggtgctcgc gtcgcgagcg ctctcgctgg cgagcgccgc gagctcccac tcgcgctccg
     1021 acggcagtcg ggccgcgcgc gcggcgcaat acgccttcgc tgcgaaccag ctgacgttcg
     1081 tcaccgggct cgtcggacgg acctccgggc cgagcgcgtc taccgccgac cagtgcttca
     1141 agtacccgtc gtccgcgaac aagcgctgag cgcgatcgcg acgccacgcg ggattttcgc
     1201 gcacgaagtc gaggaaggcg ccgttcgtca ccggcttggc gtcgaggtaa aaacgacgca
     1261 cagagacgag cttctccgcg ggggaggccg ggtagagcgg ccgatagacg ccgggcccga
     1321 ccaccaccat gccgacgggc gccttgagcg gtcgaggcgc agcgtgtgcc gcgcacgcga
     1381 gcgcggacac gagcgcaagg acacgcgcga agcaccgcga gctcatcaga tggctccgct
     1441 ccctcgcacc ttggctatct cggcaggcgt cacttcaccg ccggggttac cccagctgtt
     1501 cagcacgtag gtgatgacgt tcgcgagctc gtcgttcgtc agatgattcc aagtcggcat
     1561 caccgagttg aacgacgcgc cgttgacctt gacggggccg ctgagcccgt tcagtaccac
     1621 cccgagcacc cgctccttgt cgttcttcac gaggaagtcg gagccggcga gcggaggaat
     1681 cgagcccggc aacccgctgc ccgtcgcctg gtgacaagcg ctgcaggtcg aagcaaacaa
     1741 cgtcttgccg gccgcgattc gttcgtcgcg cgtgagcgtg ctgaccgcgg cggactccgc
     1801 gagcacggcc gccttggggg cctcctctgc ttgtgccagt gaatcttctt gtttgcccga
     1861 gtagaggagc ttgtcttctg gtccgctcac cttgagcgtg ccgacggcgc cctggttgaa
     1921 cgcccggaag agcgagtggt cgacgagcgc gtacgctccc ggtacttgga cgcgaaaatc
     1981 caagatcgca gagcctccgg cggggaccat cgtcgtttgc acgttctcct ggtagtgcgt
     2041 gccaccctcc gtatagacgc gatcgaagac ttcaccgatg acgtggaagc tcgacgtgag
     2101 gttcgggcca ccgacaccga aatagatacg cacgctgtcg ccgacgtagg ccttcaatga
     2161 tttgtcgccg agcagcgcgc cttccgcacc gttgaagacg acgtaagtcg gacgctcgtc
     2221 gatgcctttg tccatgtcga aggcttgcaa gcctttcgcg tgatacttgc ccttcgtgta
     2281 aaaatcgccc tgcatcacgt agtactcgcg atcgacgggc ggcagtcctc cgggcggttc
     2341 tacgaggatg aggccgtaca tgccgttcgc gacgtgcatg ggcacgggag cggtcgcgca
     2401 gtgatagacg aacaggcctg gattgagggc gcggaacgtg aattgcgacg cgtgtcccgg
     2461 cgcggtgaag ctcgaggcag cgccgccgcc cggccctgtc accgcatgca aatcgatgtt
     2521 gtgcggcatg gtactcgtcg cgtcgttctg aaggtgaaac tcgaccacgt cgccttgacg
     2581 cacgcggatg aagctgcccg gcaccgtccc gccgaacgtc caatacgagt attggacgcc
     2641 gtcggccatc ggcagcacca cctccttgac ggtcagtttg acgacgactc gcgcgggctt
     2701 ggtgcggttg gtaggcggcg gaacgttcgg cggcgaggtg agcacggcca tgattcggtc
     2761 atccgagggc acgctcgtga cgtccggcgg cggcgccgga tgctccgtaa aatggcgctg
     2821 ccaggcaccc acgtcgggct tttgctcaca agcagtcgca accaacgcga gagcaattgc
     2881 gctcccgcga agcacgccaa tgatcccacg ggaatctttg ctcatgcttg caatcgagca
     2941 aacctcgtgc cttgcgcagg gtcgtgctga gacgacgcag cgcgcgcggg ccggcaagca
     3001 ttgcggcaag cttcgagatc cgcgcgagag ttgcgcgcac tttaccggtt gcggcggagc
     3061 ttcatcgcgt cagcgcttcc gagtgccctc ctgccgtcac gtgcatcgat ccggaccgcg
     3121 cggcacgcgc cttgctccgc caatgtaagc atggacgccg ccggacatcc ccgtacggct
     3181 ctcggccttc gacttccgcg cgaacacggc ttctgggtca tgctcggcgg aacgctcgta
     3241 gacggcatgc tacgaacgag catgaacgcc gcgacgctcc tcgttgccgc ggtcgtcgcc
     3301 ctcgcatccg tcggcggtgc tgccgcaacg caccgccgtg ttcgaagtcg aggctcgctt
     3361 cagctggccg cggcgctcgt tctggcggtc gccggcgcac ccatcgaagc cgctgcgggc
     3421 gcacccttcg ctacactgct cgtgagcgcc ggagtgaaga gcgtcgtgtt catttcgagt
     3481 gtgctcgtcg tgcgcgcggc gctcgctacc tcgggcaaga acggttcgtc gcgcggcagg
     3541 aggctctatc tcatggcatc ggcgctcgcc ctggccggcg cgagcgcttt gacggcggcg
     3601 caccgtgcac cggaagcaat cgtgtgtgtc ctcgccaccg gctcgatttt gctctcggct
     3661 catcgccgcc cgacagccaa ggacctgaaa ccactcggtc tgtggctgac cgcgctcacc
     3721 ctgctcacga ccctcgctcc tctatttccc tgagcgttgc cgcgcgatga ccattccaac
     3781 tcaccacctg ctgggcctcg gacgacaagc gcccgcgcct cgtgcatctt cgttgctcga
     3841 acgcggcttc aggccattct ttctactcgc ggccgctttt ggcgcgtgcg ccgtgccgct
     3901 ttggctactc gcgttgcatg gcggactgca accgggcggc tcgttcggct ccatgcagtg
     3961 gcacgcccac gagatgctct tcggtttcac taccgcggtc attgccgggt tcttactgac
     4021 ggcaatcacg aattggaccg cccgccgcac cgcgacgggc tcggcgctcg gcgctctagc
     4081 cttgctttgg ctgctcggac gagcggccat gctcttcttg tctcgagcgc cgagactcgc
     4141 cgccgccgta gacggcgcgt tcttacccct cctgacggtc gtctgcgcga ttcctatcct
     4201 ggcggctcga gaccggcgaa attacccctt catcggcatt ctggtcgtgc tatcggcact
     4261 gaacgcgggg gcgcaccgcg cggcgctgca cgcggatctc gcgcaggtac gcgacatcca
     4321 cgcgctcgct ctcgatctca tcgtgctcgt catggtgctc gtgaccggtc gcatcgtgcc
     4381 gtcgttcaca cgcaacgcaa ccggcatcgc gagcaccggc acgaaccgca cgctcgaacg
     4441 cgcgagtgcc ctcgccgccc tcgcgctact cgtggcagac acattgcggg cggctctggc
     4501 gcccgggccg atgctcgtcg cgggcacagc cgcgctctcg ttggtcgcgg ctgcgctgct
     4561 cgctctgcgt atgcgccgct ggggctcgtg gcaggcgcga cgtgacccgc tgctctggat
     4621 cttgcatctc ggaagcgcgt ggttgcccgt agggctcctg ctgcgggccg gctcgctcgt
     4681 ttcttccgcg gttccggccg gcagcgccct gcacgctctc acggccggag ccattggttg
     4741 cctgacgctc ggcatgatgg cgcgagtcag cttgggtcac accggacgca tgctgcgagc
     4801 gtcacgcgcg actgccgtcg ctttcgtttg cgtggccgtg gcgggcgtgg tgcgcgtctt
     4861 ggccccactc gtgccgagcg tgctttacct ccccgtgctg gatttggcgg gcgcggcctg
     4921 gtcgagcgcc ttcctcattt tcctgttcgg tcatgttcgg atactcgtga cggcacgcgt
     4981 cgacgccccg ctagttctct caactctcga gggcagtcag cagcagctgc acggcgcgac
     5041 ccgccgcgtc gcgaatcgcg caatcggccg tggagctttc gttggcgagc aggtacagcg
     5101 acagctcccc gctcagcgtg tacacggtca agacattcga tttcacgatg ccgctcaccg
     5161 cgccgtaaaa cgattcgagc gacacgcgtg ccccgttgaa cgcgagccct cgctcgtcga
     5221 gatccccgag gttcgtgatg gcaaacgcgc gctccttccc ggccagcttc acgagcagcg
     5281 gcccgagctc gcggacgcgc tcgaaaggga ccgccttgga aaaaagacga aataccgcga
     5341 acgggtcgcg gagcgcccgc tgcaagcggc gctggcatcg gcgcgcgttg ctccaaaatc
     5401 cgagctggct ctggtaggcg agccggagct cggcggcgcc gacgaacaac ccgaagccct
     5461 caccgaccgg ccgcccgagg aagggccgca aattcacggg cacgtggatc catgaaaact
     5521 ccgagaaaaa tgccgctgcg acggctgcct ggacggagac gcgctctcga cgacagcgtg
     5581 cccgcaagcg tgcggtctgt tcgacgctga gcgtccagac gcgatggcac tgcacgcacg
     5641 gcgccggcgg cgtcgcaccg gacgcacgca accgggaata tgctttgaca agccacgaga
     5701 cggcgttgaa gaaatgcgcc gaacgcggca aacgtcgccg taccttcggc ggcagcaaat
     5761 cctcggcgct cgccggcgca gcgaggacgg cgacgggcgc ctgcggctgc tcgatgaagg
     5821 tgagcaagtc tcgaacgagg tatgcgagcg aaagaccgtc gccgatgacg tgctgcacgg
     5881 tgaacacgag gtcgaccgcc gtgcccgcgt cgttgggcac gagcaacgtc acgcgcagca
     5941 ggggaagtcg gggttgttcg cgcccgtcac gctcgaacct cgcggacagc tcgctatcga
     6001 aaagcctccg cgcagcatcc ggttccgcgt gctcgatgac cgcgagcgga atcggtccga
     6061 cgccctcgga aacgaagtac ggcagccgat tcgctccgat ttccgtgttg acgccgagca
     6121 acggatgacg gcgctgcgct cgatcgagcg ccgagcggag ctcgagtgga gtcacggcgc
     6181 cgcggacccg caccgccacg accatgttgt acggctgctc gacacaccaa ttgaggtact
     6241 cgatctcgtt gagctcgcgt cgcatctcgg cggaccgagc gtgcaagcgc cgcgccgcta
     6301 cttgcgccca cgttcgagcg cgcggaggag cgcaaagcct gcgcgcgaag gcattcggcg
     6361 cgaagcagtt gcgcgcgctg agctcagggc ggtggcgaaa aggtcgctgg caccggcccc
     6421 gtcaagcttt cgagaaagac gacgatggcg tcgatgcgtt cggcgggcag gcgcttgccg
     6481 agttgcgttt gggccatgat ggcgacggct tcgggcagcg ttgcgaccga accgtcgtga
     6541 aagtacggcg ccgtgcgcgc gacgtttcgg agcggcgcga ccttgaaaac gtagcggtcg
     6601 gctgcgtcct tcgtgacgtc gaagcggccg gtgtccacgg ggttactgtg cgtgagtggg
     6661 gcgtattcca cgtcgatgcc gaacttccga agcgcgacgc cgccgagcag cggaccgtcg
     6721 tggcattgaa cgcagccttc atccatgaac gccgtgagcc ctgcgcgggc gctcgcgctg
     6781 agcgccttgt cttcgcccgt cagaaacgcg tcgaagggac ccggcgtcac gagcgtgcgt
     6841 tcgtaggcac cgatcgcggt gccccaattc cgaatgctca cgggctccgg gtcgctcggg
     6901 aatgcgcggt gaaattcgtc ggggtacggc gccggcaagg cgcgtagccg tccgagtgct
     6961 tcttcttccg tggcattgcc gaacgagggc ttgccgagga gcgcgcggcg cgcctgatct
     7021 tcgacggaat cgcggtcggc gcgccagtgt tcggccgttt gagacgcggc gttgaagacg
     7081 gtcggggaat tccgcggatt ttcccgttcg aagacgccac gggcgcgtgg cagcccgtcg
     7141 gtcgcatagc gcgccggcag gtggcagctc acgcagccga tcttgccgtc cgccgaaacg
     7201 cgcggctcga agaacaagcg gcgaccgagg gcgacttgct ccgcgggaag cgcagcagcg
     7261 ctcggtagcg tgccgaacga cgctttcgcc cgagcgagca gcgcaccggc gttcgcggag
     7321 gcggccggcg ccggaacgcc ggggacggct acgttcgccg ggggcgtcga gggcggacgc
     7381 gcggcgcagc cagcgagcaa gctcagcgaa accagcgcaa aaacttgcga cttcggagtg
     7441 gctgacacgt ccacgggcga agcctagggc ccgtcccccg ccgagccaag ccctacctcg
     7501 acgcccaatg ctatgagggc ggctctcgca tgctcggctt gatcaatctc ggcaaatcct
     7561 tcggcgctcg cacgctgttc gagggcgtat cgctgaagct cgtgccggag gcgcgctacg
     7621 gcctcgtcgg agcaaacggc tcgggcaaga cgacgctgct caagatcttg gcaggcgacg
     7681 aacccccgag cgacggctcg gtgacgctac ccaaaacggc gcgcatgggc gtcctgcggc
     7741 aggatcgctt cctcgacgac gccgagccca tcttgagcgt cgcgacggcg ggcgacgaga
     7801 tcgtcacgag cgcccgccgc gagcaagcgt tgctcgccgg tgacgccggt gcgaatgccg
     7861 agcggatcct cgagctcgag gatcgcatcg ccgcgcacga cggctacacg ctcgaggcgc
     7921 gcgccagcgc gattttggag ggactcggca ttcccgtcgc ggagcacggc cgaccgctcg
     7981 cgaccctgtc cggcgggttc aagctgcgcg tcctgctcgc gcaggtgctc atcggcggcc
     8041 ccgacgtcgt gctgctcgac gagcccacca accacctcga tatcctctcg atccgctggc
     8101 tcgagcaatt cctcgcggcc tatcggggga cggcgctcgt gatttcccac gacgaacact
     8161 tcctcgacag cgtcgcgacg cacatcctcg atgtcgacta cggcacggtg acgctttaca
     8221 cgggcaacta tgcggcgttc gcgcggcaaa aagccgaggt gcgccagcgc aaggaagccg
     8281 aggtcgcgcg cgccgaggcc aacatcgcgg aaaaacgcgc ctgggtcgaa cgcttcggcg
     8341 ccaaggcgac caaggcgcgc caggcgcaga gtcgactgaa gcagatcgag cgcatcgaag
     8401 tcgaggtgct cgagcaaacg tcgcggcgga gtccggcgtt caggttcgag gccgagcgac
     8461 cgagcggacg cgacgtgctc acgctcgacg gcatctcgaa agcctacggc gacaaacgcg
     8521 tgctcgaacg ggtttcgctg acggtgcggc gcggcgagcg cttggccgtc atcggcaaga
     8581 acgggctcgg caaatcgacc ctgctcaagg tcgcgatggg ggcactcccg cccgacgcag
     8641 gcagcgtcac ttggggttac gaaacgcgcg tcggctattt cgcccaagac caccatgaag
     8701 tgctggagcg ccccgacgcc acgccgttcg aggtgatcga cgccgcgctg ccgctcgacg
     8761 gaccgagcgt cgtgcggggt catctcggac gcgtgctctt ctccggcgac gacgtcaata
     8821 agccgattgc ggcgctgtcg ggcggcgagg cggcgcggct cgtcttctgc cgcatcatgg
     8881 tgcaacgtcc gaacgtgctc gtgctcgacg agcccacgaa ccacctcgat ctcgagtcga
     8941 ttcacgccct ggtcacggcg ctcgccgcgt tcgagggcac gctgctcttc gtttcgcacg
     9001 atcgcgcgtt cgtctcggct ctcgccacgc gcattctcga agtgcaggcg ggcggtttca
     9061 acgacttccc cggcagctac gacgacttcc tcgcgcgcgc cggcgacgat cacctggacg
     9121 caaacgccgt cgtgctccgc gccaagcaag cacgggccgc cgcggccaac ggcccgaacc
     9181 aagcgatctc gtgggaagag agcaaacgtc gcgccaaccg cctgaaacag ctgccggcgc
     9241 tgcgcgatca agcgctcgcc gcgatcgagg cggccgaagc ccgcaaagcg caaatccaag
     9301 cgagcttttg cgcagacgga ttcttcgagc gcacgcccaa agaacgagtc gcggcgctcg
     9361 aagcggaaga gcgcgcgctc ggtccgcgca tcgaagcctt gatcgcggag tgggaggcgc
     9421 tcgagacgga actcggagaa agcgccgcgc gctgacggca ggaacctgca cgacctgcgg
     9481 cgcgcacgct gagaggccgc tgccactcgg cgcgccgtga ccgctcatga cgtgtgctag
     9541 gagacagccg tgaagctcga gtttacgaac cgcgcctggc gtgatttgcc gttcgatccc
     9601 aacgaggaga atcgcacgcg ccaggtgttt ggcgcttgtt tcacgcgcgt gcggcccacg
     9661 ccggtgaagg ctccgcgcac gctctgcgtg gcgcgcgagg tcgccgagct cttggatttc
     9721 acgccggagt tcacggcgag cgccgagttc gccgaagtgt tcgccggcaa tcgctcattg
     9781 ccgggaatgg atccagttgc ggcttgttac ggcgggcatc aatttggaac ctgggcgggg
     9841 cagctcggtg acgggcgcgc gatcagcctc ggtgagctca agaacgcgcg cggcgagcac
     9901 tgggagctcc agctcaaagg cgcaggaccc acgccgtact cgcgacgtgc ggacggccgg
     9961 gccgtgctgc gctcgtcgct gcgggaattt ttgtgcagcg aggccatgca tcacctcggc
    10021 attccgacga cgcgcgcgct gtgcctcgtc tcgaccgggg aagacgtgct gcgcgacctg
    10081 ctctacgacg gtaacgctcg gcacgaaccg ggtgccatcg tgtgtcgcgt cgcgccgacg
    10141 tttctccgct tcggcaattt cgagctcttt gcggcccggg acgatcggga gaacttggcc
    10201 aaactggggg cgcacacgct cacgacgcat tttcccgagc tcggcccgcc gtcagccgag
    10261 gcattccagc agctactcgg ggaagtcagt cgccgcacgg ccgagctcat ggccgcatgg
    10321 atggcgaagg gcttcgtaca cggcgtcatg aacacggaca acatgtcgat cctcgggctc
    10381 acgatcgact acgggccgtt cggttttttg gatgatttcg cgcccaactg gacaccgaac
    10441 atcaccgacg cgagcggccg gcgctaccgc tacgagaatc agcccagcgt cgcgctctgg
    10501 aacttggtgc ggctcgccca tgcgctgttt ccgctcatcg gcgacgtgag cgccgtcgag
    10561 gcggcgctca gcgcttacgg ggacacgctc actcgtgcgc ggtcgcagag cctcgcggag
    10621 aagctcggtc tccacgcctt gcgtgaagac gagacgcgcg ccgatggcac gccgggcgtg
    10681 tccgacgcga cgctcgtgga cgacctgttc gaactcctcg ccgcggtcga aaccgatttc
    10741 acgctgttct ttcggcgcct cgcggacgtg aagacggacc ctgccgcggg cgagccgagc
    10801 gacgaagtgc ggttcgcgcc gctccgtgac gcctactacg atccgagcgc cgtgagcgac
    10861 gaccaccgct cgcgcctgct cgtctggctc cgccgctacg tcgcgcgcgt acgcgacgac
    10921 ggccgtcccg acagcgagcg ccgccgcgcc atgaacgccg tcaacccgaa atacgtcctc
    10981 cgcaactacg tcgctcagct cgcgatcgaa gccgccgaac gcggggatct ctccgtgctg
    11041 agcgagctcc tcgacgtgct ccggcatccg ttcgacgagc aaccggcgca cgcgcgcttc
    11101 gccgagaaac gcccggagtg ggcgcgccat cgcgccggct gctcgatgtt gtcatgcagc
    11161 tcctgagtcg agtcacgcga tcttggaagg ccagatcacg atcggcgcga gcggccattc
    11221 gccacgcgaa taaccggcga ggccggcggc tgggccgcgc gggaacgcca cggacgcgtg
    11281 accttcggaa gctcgtctcg gcaaaaaagg tggtcagctt ccgatcgcga gccagctcac
    11341 gtcgaccgac cagacacgcg tcgcgagcca cgtctcgagc tcgacctcga agcccgcttg
    11401 atccacgtgc gtgacgcgca cgcgcagccg cgccgcgtcg ctgttctcga tgtcgaaccc
    11461 gctgacgccc acgtgcacga cgggcgccag ctgaaacgcc gactcgaaca cgatgcgcgc
    11521 cgcatgagaa cgcggggcat cgccgttcgg ctcgagcagc ctccagccga tctgctcgct
    11581 atcgaagcga gccacggcgg cggcaatttt cagcggaaga acgggcgcaa gcggagtttc
    11641 cagggacacc cttgccgcgt accgaagctc ccccctggat gcaacggatg attgagacat
    11701 ctccgcgaca caaaggcgcg gctcggcgcc atactacggg cgaaaacgcg ggagccgtca
    11761 cgtgcgcccg tcgtgcgagc tagaactgaa ccgcgcgcgc ccgaaaggta ggaggagcga
    11821 tgaacgtagc gtcgcgagag accacgtgct gcattgccgg aggtggcccg gcaggaatca
    11881 tggccggcct cctgctcgcg cgtcagggag tcgatgtgat cgtgctcgag aagcacggcg
    11941 acttcctgcg cgactt
//
LOCUS       DATIML010000662         4132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4175525, whole genome shotgun sequence.
ACCESSION   DATIML010000662 DATIML010000000
VERSION     DATIML010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4132
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4175525"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1071)
                     /locus_tag="VLJ38_11370"
     CDS             complement(<1..1071)
                     /locus_tag="VLJ38_11370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40166.1"
                     /translation="MRFGLLVTSAGLVAQVGACNAILGNESEYVLVAAGGEDSGAQAG
                     STGASSGGKGGAAGSSLSSGGKSAGAGGKASGGTTAGGTGGGAGAGEGGVEEPAGAAG
                     AAGGDAGAPSCVRRGAENCFNGVDDDCNGDIDCEDSACNGPAECRPVPAGAEPGYFAA
                     PGGTCPSGYTRVDLHQDLQVPMQCNGCSCVSPTKLLCDSGVYGHGTYACPSYQFNGQL
                     WDVFNDRCSSLPGDPNLHYYSIRGTSECTPAGTPTLDPATWSASAIFCLADRVGGGCG
                     AGKACVPAEVPTWCTLGDGGCSPDYANDRGTWYEGVDDQRACSACQCGLGTADCSASY
                     IGVYSDGGCGTAPTPLPSVQVQG"
     gene            complement(1071..2078)
                     /locus_tag="VLJ38_11375"
     CDS             complement(1071..2078)
                     /locus_tag="VLJ38_11375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40167.1"
                     /translation="MPTRRVRWLLAGFGVATGLALTPAPARAATPADSAAAQALFEQA
                     KRLLKEGKAAEACPKLEESQRLDPGSGTLINLARCYEQTDRLASAWNKYLEAAAAALA
                     SGNAQREKEARARATALRPTLSELVIEVSPDAKAVSGLEITRDGERVGPAQWGVPIPA
                     DTGEHRIAASAPGREAWQSVVVVRGPGGTFAATVPALVPAGGVPVVATQGEPAPAPVA
                     TTEPAPSSGGLGTQRTIALVAGGVGVAGVIVGSIFGLKSKSDHDEAENYCDGSRCTDA
                     RGVTAGNAAHSAGNVSTVAMIVGGVGLAAGVTLWLTAPKARASAALKLTPGSLHVQGS
                     F"
     gene            complement(2095..3549)
                     /locus_tag="VLJ38_11380"
     CDS             complement(2095..3549)
                     /locus_tag="VLJ38_11380"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40168.1"
                     /translation="MSVSHATAGVREGDILAGKYRVDRVLGVGGMGVVVAAHHVELDD
                     RVAIKFLLPEALHSGEAVARFGREAQAAVKIKSEHVARVTDVGRLENGAPYIVMEYLD
                     GLDLGAWLQQRGPLPIAQAVEFLLQACEAIAEAHALGIVHRDLKPANLFVIRRPDGGL
                     SVKVLDFGIAKRTGAGQVASITSTAAVMGSPLYMSPEQLNSAKDADARTDVWALGVIL
                     YELLAGEAPFIAETLPSVMVKITASEPPPLRARRPEVPAGLERVILTCLEKDRSKRFP
                     TIGDLAHALVDFGSPRSRTSVERIAGIMAASGIALSATGPAEVPPSGVSGNSAGTMAA
                     WNQSAPTGKRSRGTLFALLAGSALALLVVTWFALRHDGGGGTGAMGSAAAPESATAIG
                     ARSSPAVPETARHAALVPAPPPATAAPLASASASPTPPPGSALSTARAPSPTRVPAAR
                     TSPAAPSGKSQKAAAKISGKPSAAGKLDVYDDRK"
     gene            complement(3744..>4132)
                     /locus_tag="VLJ38_11385"
     CDS             complement(3744..>4132)
                     /locus_tag="VLJ38_11385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU40169.1"
                     /translation="ARHFLAHFGRELAKPLELSPAALDALAAYDWPGNVRELRNVIER
                     AVVLADPGGVLEPDDLSFDLALTSAAASASAAPHPSIFDEIAQAEAERIRAALREAGG
                     SKARAARLLGLPRTTLNDRLRKLAIR"
BASE COUNT          640 a         1496 c         1371 g          625 t
ORIGIN      
        1 gccttgaacc tggacgctcg gcaggggcgt gggagccgtg ccgcagcccc cgtcggagta
       61 gacgccgatg tagctcgcgc tgcagtcagc cgtaccgaga ccgcactggc acgccgagca
      121 cgcgcgctgg tcgtcgacgc cctcgtacca ggtgccgcga tcgttcgcgt agtcggggct
      181 gcatccgccg tcgccgagcg tgcaccacgt ggggacctcc gccgggacgc aggccttgcc
      241 cgcaccgcag ccgccgccca cgcgatccgc caggcaaaag atggcactcg cggaccacgt
      301 cgctggatcg agggtgggag tgcccgccgg cgtgcactcc gaagtaccgc gaatcgaata
      361 gtagtgaaga ttcgggtcgc caggcagcga ggagcagcgg tcattgaaca cgtcccagag
      421 ttgcccgttg aattggtagc tcggacaagc gtacgtgccg tgaccgtaga cgccgctgtc
      481 acacagcaac ttcgtcggag aaacgcagga gcagccgttg cattgcatcg gtacctgcaa
      541 atcttggtgc aggtcgacgc gggtgtatcc gctagggcag gtacccccgg gggcggcgaa
      601 gtacccgggc tcggcgccgg ccggcacggg acggcactcg gcaggaccgt tgcacgccga
      661 atcctcgcaa tcgatgtctc cgttgcaatc gtcgtcgacg ccgttgaaac aattctcggc
      721 gccgcgcctc acgcagctcg gagcgcccgc gtcgcccccc gccgcaccgg ctgcaccggc
      781 gggctcttcg acgccgccct cacccgcgcc cgcgccgcca ccggtcccac ccgccgtcgt
      841 cccacccgaa gccttgccgc ccgcgcccgc gctcttcccg ccgctgctca gcgagctgcc
      901 cgcggcgccg cccttgccgc cggaactagc gccggtggat cccgcctggg cgccggagtc
      961 ctccccgccg gcagccacga gcacatactc gctctcgttg cccaggatcg cgttgcacgc
     1021 gccaacctgc gccacgagtc cggcgctagt aaccaggagc ccgaagcgca tcagaacgac
     1081 ccctggacgt gcaggctgcc gggcgtcagc ttgagcgcgg cgcttgctcg ggctttcgga
     1141 gccgttagcc acagcgtcac gcctgccgcg agaccgacac cgccgacgat catggcgacg
     1201 gtcgaaacgt tacccgcgga gtgcgccgca ttgcctgcgg tgacaccgcg cgcgtccgtg
     1261 cagcggctgc cgtcacagta gttctccgct tcgtcgtggt ccgacttgga cttcaagccg
     1321 aaaatgctgc cgacaatcac gcccgccaca ccgaccccgc ctgccacgag cgcgatcgtt
     1381 cgctgcgtgc cgagaccgcc gctcgaggga gcaggctccg tggtggcgac gggagccggc
     1441 gccggttctc cctgcgtggc aaccactgga acaccaccag cgggtaccag tgcgggaacc
     1501 gtggcggcaa aggtgccgcc gggtcctctg acgacgacga cgctttgcca cgcttcgcgg
     1561 cccggggcgc tcgccgcgat gcgatgctca cccgtatcgg cgggaatcgg gacgccccac
     1621 tgcgccggcc cgacgcgctc accgtcgcgc gtgatctcga gcccactcac tgccttggcg
     1681 tccggcgaca cttcgatgac gagctcggac agtgtcggac gtagcgccgt cgcccgagcg
     1741 cgcgcctcct tctcgcgctg cgcgttgccc gaagccagcg ccgcggcagc ggcctcgaga
     1801 tacttgttcc aagcggacgc gagccgatcg gtctgctcgt agcaacgcgc tagattgatg
     1861 agcgtcccgc tgcccggatc gaggcgctga ctctcttcga gcttcggaca ggcttcggcc
     1921 gccttgcctt ccttcagcaa gcgcttggcc tgctcgaaga gggcctgcgc cgcagcgctg
     1981 tcggccggcg tcgccgcgcg agcgggggcc ggcgtgagcg ccaatcccgt cgctacgccg
     2041 aaccccgcga gcagccagcg aacgcgacgc gtcggcacgc tggttctgcc tcgctcactt
     2101 tcgatcgtca tagacgtcga gcttaccagc cgcactcggc ttaccggaga ttttggctgc
     2161 tgccttttgc gacttgccgc tcggagcggc tggactcgtg cgggcggcag gcacgcgtgt
     2221 cggcgagggt gcgcgcgcgg tgctcaatgc cgatccgggt ggcggcgtcg ggctcgcgct
     2281 cgctgacgcg agcggcgccg ccgtcgctgg cggaggagcc ggaaccaacg cagcgtgccg
     2341 cgccgtttcc ggcacggcgg gcgacgaacg tgcgccgatg gccgtcgcgg actcgggcgc
     2401 ggccgccgag cccatcgcgc ccgtgccgcc gccgccgtcg tgacgaagcg cgaaccacgt
     2461 cacgacgagc aacgccagcg cgctaccggc gagcagcgca aacagcgttc cacgactgcg
     2521 ttttcccgtg ggcgcactct gattccaagc cgccatggtg ccggctgaat tccccgacac
     2581 cccgctcggg gggacttccg ccggccccgt cgcgctgagc gcgatgccgg aagcggccat
     2641 gatgccggcg atgcgttcga ccgaggtccg cgagcgcggg ctaccgaaat cgaccagcgc
     2701 gtgcgcgaga tcgccgatgg tcggaaagcg cttcgaacga tctttttcga gacacgtgag
     2761 gatgacgcgc tcgagtcccg cgggcacttc ggggcggcgt gcgcggagcg gcggcggctc
     2821 gctcgcggtg attttcacca tcacggaagg cagcgtctcc gcgatgaacg gagcttcccc
     2881 agcgaggagt tcgtacagga tcacgccgag agcccacacg tccgtgcgcg cgtccgcgtc
     2941 cttcgccgag ttcagctgct cgggtgacat gtaaaggggc gagcccatca ccgcggccgt
     3001 gctcgtgatg ctcgcgacct gcccggcgcc cgtgcgtttg gcgataccga aatcgagcac
     3061 cttcacggag agcccaccgt cgggccgccg gatcacgaat aggttcgcgg gcttgagatc
     3121 ccgatgcacg atgccgaggg catgcgcttc ggcgatagcc tcacacgcct ggagcaggaa
     3181 ctcgacggcc tgcgcgatcg gcaaagggcc gcgctgctgc aaccacgcgc caaggtcgag
     3241 cccgtccagg tactccatga cgatgtacgg cgcgccgttc tcgagccgcc ctacgtcggt
     3301 aacgcgcgcg acgtgctcgc tcttgatctt gacggcggcc tgggcttctc gcccaaagcg
     3361 cgcgacggcc tcgccgctgt gaagcgcttc cggcaacagg aatttgatgg cgacgcgatc
     3421 gtccaattcc acgtggtgcg ctgccaccac gacgcccatg ccgcccacgc cgagcacgcg
     3481 atcgacacga tatttccccg ccaaaatatc gccttcgcgc acccctgccg tcgcgtgcga
     3541 gacgctcacg gctgtttcct cggagctcgg atccgcatgc ggcagagccg ctatttatat
     3601 cagatcggcg gccacgcgct gcccgtcgga ctgttccggc gccaagcaca tacacctaca
     3661 cccgccgcac gagcgcgagc gcggattccg gccgggcgcg caggcaagaa gcgctttggt
     3721 tgcgggccga gccgtctcgc gcgtcacctg atcgcgagct tgcgcaagcg atcgttcagc
     3781 gtcgtgcgcg gaaggccgag caggcgcgcc gcccgcgcct tgctaccgcc tgcctcgcgc
     3841 agagcggcac gaatgcgctc ggcttcggct tgcgcgattt cgtcgaaaat ggacgggtgc
     3901 ggcgccgcgc tcgccgacgc ggccgcactc gtcaatgcga gatcgaagct caagtcgtcc
     3961 ggctcgagca cgccccccgg atcggcgagc accactgccc gctcgatgac gttcctgagc
     4021 tcgcgcacgt tgcccggcca atcgtaggcc gcgagcgcgt cgagcgccgc cggcgaaagt
     4081 tcgagcggct tggcgagctc acggccgaaa tgagccaaga aatggcgcgc ga
//
LOCUS       DATIML010000663         4535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5046864, whole genome shotgun sequence.
ACCESSION   DATIML010000663 DATIML010000000
VERSION     DATIML010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4535
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5046864"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..937)
                     /locus_tag="VLJ38_11390"
     CDS             complement(<1..937)
                     /locus_tag="VLJ38_11390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSU40170.1"
                     /translation="MAGGSRQRQADAADAGALEGDLPFGEPRSGTAPKPPSLLDDAAR
                     LRALVTHVPDPILEVDAGGVVLFASRSLPGAPASVEGRSFFELLAPQFRASTRTVFEA
                     ALRSGEAATIEVMANGASEDVNWYSCRIGVLDDHAVVTVRDTTGRRQTDAQLFATDRL
                     ASVGTLAAGVAHEINNPLAAVIANLELAAADIVASGGGGELLEEVRDAREAAERVRLI
                     VRDLRLFSRAEETRRRMVDVREVLDSTLRMAWHEIRHRARLVKAFDDVPNVEANEARL
                     GQVFLNLVLNAAHAIPEGRAETNQIRVATRHEDGRV"
     gene            1139..1546
                     /locus_tag="VLJ38_11395"
     CDS             1139..1546
                     /locus_tag="VLJ38_11395"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40171.1"
                     /translation="MASNRSAASEQPPAGGTRSVLVVDDEPLLIKSLGRSLQARGFTV
                     MTAVGADEALRVARNVTALDLLVTDVFLPGTDGVALATLLIEARPDLPVLFISGLDAG
                     PVAGRLAAVKRWAFLAKPFGHRQLDDCLAELLG"
     gene            1649..1999
                     /locus_tag="VLJ38_11400"
     CDS             1649..1999
                     /locus_tag="VLJ38_11400"
                     /inference="COORDINATES: protein motif:HMM:NF025704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4398 domain-containing protein"
                     /protein_id="HSU40172.1"
                     /translation="MREFCLVGVVALVTACGGAAVPQESLTAAKASIAGAEVGGAASE
                     PKAALHLKLAKEQVAKAESLISDGDNEEAARVIDRAQADADLSLALAKEVSAEKAAIE
                     TKEQLEKLRKKATQ"
     gene            2031..2876
                     /locus_tag="VLJ38_11405"
     CDS             2031..2876
                     /locus_tag="VLJ38_11405"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU40173.1"
                     /translation="MKNGFNRIALFTLLPQALLACATPMPPQELLDARTAYDVATKSS
                     APQYAPAQLDTAKQSLARAEQSFQDNGDKPVTKDLAYVADRRAKLAAAEGSREQAERT
                     RAQMDKDFRSTEIDALETTKSKLENEQRARAEAEKGLADAQKKLSLAMASLAEIAKVK
                     EESRGVVITLSGSVLFATGKSALLPIAQEKLAEVAKALNDQGFKSLLVEGHTDSQGSA
                     DKNMVLSQERAESVRTYLISQGIPSDKIKAQGIGSSRPVADNGTAEGRANNRRVEIVV
                     EPLGK"
     gene            complement(2880..4241)
                     /locus_tag="VLJ38_11410"
     CDS             complement(2880..4241)
                     /locus_tag="VLJ38_11410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40174.1"
                     /translation="MTALPVELPAPDLGAAGIAFERWLRARPDTSHAYLRSESRVRFE
                     PRDDDVLVPLPGVTVRATPGGSELGGGALPKPLPLPGVAETAARRFFTLLDGDVTLAR
                     ACRAAPLDANARQTVLSATFGVALFAPFAVAELERAVSGVEIVRFPGAPYEIERPYWE
                     NMAAVRRASPALESALDDARAALAELQSLHVTALMGASRANFYCPASRVAQNGVSPGT
                     LWHTPSRTLDTPEGTRFLEGPRVHVPLLGGPGYGALLAELSGDPEATLGRRKLDDEGL
                     DWGRVVTAMAVSDAEPAPWFCPPRPITLAHVEQLFSSLALAVAAATRGERATTVHALA
                     DFHQRFVRLHPFRACNQALAMNLVNGVLARVTGAGMPHLVLDHVALRWAPAAYRRLFT
                     CAVDAWCVGGAPAARLARLLTLKRDYFALVTRLQATSDAAEARVAAETMPDAARLALL
                     DLS"
     gene            complement(4238..>4535)
                     /locus_tag="VLJ38_11415"
     CDS             complement(4238..>4535)
                     /locus_tag="VLJ38_11415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40175.1"
                     /translation="AVTATRERRTRFWVGDTWKAAWSLARRRPDLRIRTILTPPSGLV
                     VVRRLDPSSRTLADGFDALVNELRTQSYPLEPGRWPALLNVVPNTPEGLAEALS"
BASE COUNT          766 a         1531 c         1588 g          650 t
ORIGIN      
        1 cgacacgacc gtcttcgtgc cgcgtggcga cgcggatttg gttcgtttcg gcgcgacctt
       61 ccgggatggc gtgcgcggcg ttgagcacga ggttcagaaa tacctgaccg agccgcgcct
      121 cgttcgcctc gacgttgggc acgtcgtcga aggccttcac gagccgcgcg cggtgccgga
      181 tttcgtgcca ggccatgcgc agcgtggagt cgagcacctc gcgcacgtcg accatgcggc
      241 gccgcgtctc ctcggcgcga gaaaacaggc gcaaatcgcg gacgatcagg cgcacgcgtt
      301 cggccgcttc gcgtgcgtcg cggacttcct cgaggagctc gccaccgccg ccgctcgcaa
      361 cgatgtcggc tgccgcgagc tcgaggttgg cgatcacggc ggcgagggga ttgttgatct
      421 cgtgcgcgac gcccgcggcg agcgtgccga cggacgcgag ccggtcggtg gcaaagagct
      481 gagcgtcggt ttggcggcgg cccgtcgtgt cccgcaccgt gacgacggcg tgatcgtcga
      541 gcacgccgat gcggcacgag taccagttca cgtcttcgct ggcgccattg gccatgactt
      601 cgatcgtcgc cgcttcaccg ctgcgaaggg cggcctcgaa cacggtgcgg gtggacgcgc
      661 gaaactgcgg cgcgagcaac tcgaagaacg agcgcccttc gacgctcgcc ggcgcgccag
      721 gcagcgagcg gctcgcgaaa agcaccacac ccccggcatc cacttccagg attggatccg
      781 gtacgtgggt gacgagcgcc cgcaaccgcg ctgcatcgtc gagcaacgaa ggcggcttcg
      841 gggccgtacc cgaacgcggc tccccgaagg gcaggtctcc ctccaacgcg ccggcgtcgg
      901 ccgcgtccgc ctgccgctgc cgtgaacctc ctgccatttt tctccgctct gcccgctcga
      961 atgtagggtg caggataggc agccggcctg cgcgtgacaa gggccggccg tttccggcca
     1021 aggactggtc ggaaacgggc tccgagcttc cgtcaatggg cagagctttg gccgtcgcca
     1081 ctcactgctt gaaccccgcg gcagggtggc acatacgttg ctgcctattt tgcccggctt
     1141 ggcttcgaat cgcagcgctg cctcggaaca accaccggcg ggcggcacgc gctcagttct
     1201 tgtggtggac gatgagccgc tccttataaa gagcctcggt cgttcgctcc aggcgcgcgg
     1261 ctttactgtc atgaccgcgg tcggagcgga cgaagcgcta cgtgtcgcgc gaaatgtcac
     1321 agccctcgat ctgctggtga cggacgtttt tctgccaggc accgacggcg ttgccctcgc
     1381 cacgctgctt attgaagcgc gaccagatct ccccgtcctc ttcatctccg ggctcgacgc
     1441 cgggccggtc gctgggcggc tggccgcggt caagcgctgg gcctttctgg ccaaaccgtt
     1501 cgggcatcgg cagctcgacg actgcctggc cgaattgctc ggataagctg agcgaattcc
     1561 ggcgcgtcga ggatgacgga cgcgttcggg atcgatatag tcccccgcac gccccgtgct
     1621 ggggcgctga agtaacccga ggatttccat gcgagagttc tgcttggtcg gggtcgtcgc
     1681 gctggtcacg gcatgtggtg gcgcagcggt gcctcaggaa tcgttgactg ccgcgaaggc
     1741 atccatcgcg ggcgccgagg ttggtggcgc cgcttccgaa ccgaaggcgg cgcttcactt
     1801 gaagctcgcc aaagagcaag tcgcgaaggc ggagagcctc atcagcgacg gcgacaacga
     1861 ggaagccgcg cgcgtcatcg atcgcgcgca agcggacgcc gacctgtcgc tcgcgctcgc
     1921 caaagaagtg tccgccgaga aggcagcgat agagacgaaa gagcagctcg agaagctgcg
     1981 caagaaggcg acgcagtagc cgtgcgccgg acggatcagg agtcagcgag atgaaaaacg
     2041 gtttcaaccg catcgcattg ttcaccctgc tgccccaggc gctgctcgcc tgcgcgacgc
     2101 ccatgccgcc gcaggagctg ctcgatgcca ggacggctta cgacgtggcc acgaagagct
     2161 ccgcgcccca atacgcgccg gcccagctcg acacggccaa gcaatccctc gcccgggccg
     2221 agcagtcatt ccaggacaac ggcgacaaac cggtgaccaa ggatctcgcg tacgtcgcgg
     2281 accgccgcgc gaagctcgcc gcggccgagg gctcgcgcga gcaagccgag cgcacacgcg
     2341 cgcagatgga caaggacttc aggtccaccg aaatcgacgc gctcgaaacg acgaagtcga
     2401 aactcgagaa cgaacagcgc gcgcgcgccg aagccgaaaa gggtctcgcc gacgcgcaga
     2461 agaagctctc gctcgcgatg gcgagcctcg ccgagatcgc caaggtcaag gaggagtcgc
     2521 gcggcgtcgt cattacgctc tcgggttcgg tgctgtttgc gacgggcaag agcgcgctcc
     2581 tgcccatcgc acaggaaaag ctcgccgagg tcgcgaaggc cttgaacgat cagggcttca
     2641 agagcctgct cgtcgagggt cacaccgact cgcagggcag tgccgacaag aacatggtgc
     2701 tctcgcaaga gcgcgccgaa tccgtgcgga cctacctcat cagccagggc atcccctccg
     2761 acaagatcaa ggcccagggc atcggctcct cgcggcccgt tgccgacaac ggcacggccg
     2821 agggacgcgc caacaaccgt cgcgtcgaaa tcgtcgtcga gccgctcggt aagtaagcgt
     2881 caactcagat cgagcagcgc gaggcgcgcg gcgtccggca tggtttcggc ggcgacgcgc
     2941 gcctcggcgg catctgaagt cgcctgcagg cgcgtcacga gcgcgaagta gtcgcgcttc
     3001 agtgtgagga gacgcgcgag ccgtgcggct ggggctcccc cgacgcacca cgcgtcgacg
     3061 gcgcaggtga agagccgccg gtacgccgcc ggcgcccagc gcagcgcgac gtgatcgagc
     3121 acgaggtgcg gcatgcccgc gcccgtcacg cgtgcgagca cgccgttgac gaggttcatc
     3181 gccagcgcct gattgcaggc gcgaaacgga tgcaggcgca cgaagcgctg gtgaaaatcg
     3241 gcgagggcgt ggacggtggt cgcccgttca ccgcgggtcg ccgcggcgac ggcgagcgcc
     3301 agggaggaaa acagctgctc gacgtgcgcg agcgtgatcg gacgtggcgg gcagaaccag
     3361 ggtgccggct ccgcgtcact cacggccatg gcggtgacga cgcggcccca gtcgagccct
     3421 tcgtcgtcga gcttgcggcg cccgagcgtc gcttcgggat cgccggagag ctcggcgagg
     3481 agcgcgccgt agcccggccc gccgaggagc ggcacgtgca cgcgagggcc ttcgaggaag
     3541 cgcgtaccct ccggggtgtc gagcgtgcgc gacggcgtgt gccagagcgt gccggggctg
     3601 acgccgtttt gcgcgacacg gctcgcaggg cagtagaaat tcgcgcggct cgcgcccatg
     3661 agcgccgtca cgtgcaagga ctgaagttcg gcgagcgccg cgcgcgcgtc atcgagagca
     3721 ctttcgagcg caggggacgc ccgccgaacg gcggccatgt tctcccaata cggccgctcg
     3781 atttcgtaag gtgcgccggg gaagcgcacg atttcgacgc ccgacaccgc gcgctcgagc
     3841 tccgcgacgg cgaacggcgc aaacagggcg acgccgaacg tcgccgagag caccgtttgg
     3901 cgtgcgttcg cgtcgagcgg cgccgctcgg cacgcccggg cgagcgtcac gtcgccgtcg
     3961 agcagtgtaa agaagcgccg cgcggcggtc tcggcgacgc ccggcagggg caggggtttc
     4021 ggcagggctc cgccgccgag ctccgagccg cccggagtcg cgcgcaccgt gacacccggc
     4081 agcggcacga gcacgtcgtc gtcgcgcggc tcgaagcgca cgcgcgattc gctgcgcagg
     4141 tacgcgtggc tcgtgtccgg tcgcgcgcgc agccagcgct cgaacgcgat gccggccgct
     4201 ccgagatccg gcgccggaag ctcgacggga agcgccgtca cgacagcgct tccgcgaggc
     4261 cttccggcgt gttcggcacg acgttcagca gcgccggcca gcgtcccggc tcgagcgggt
     4321 agctctgcgt tcgaagctcg ttcacgagcg cgtcgaagcc gtcggcgagc gtgcgggagc
     4381 tcggatcgag ccggcgcacg accacgaggc ccgaaggagg cgtcaggatc gtgcggatgc
     4441 gcaaatcggg ccgtcggcgc gccagtgacc acgcggcttt ccacgtgtcg ccgacccaaa
     4501 aacgcgtccg gcgctcgcgc gtcgccgtca cggcc
//
LOCUS       DATIML010000664         3745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_423951, whole genome shotgun sequence.
ACCESSION   DATIML010000664 DATIML010000000
VERSION     DATIML010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3745
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423951"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /locus_tag="VLJ38_11420"
     CDS             complement(<1..373)
                     /locus_tag="VLJ38_11420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40176.1"
                     /translation="MQDAFVRYLRAKVSIDDAAINRTVFAAAKAAIASGAGGEPTRVL
                     DLGAGSCSMLVRAADWGLLEHAHYVAVDADASVLAAAKVQLSEWARARGDECVATGTD
                     ELVIRGDGRQLTVRLVHASLDD"
     gene            467..2743
                     /locus_tag="VLJ38_11425"
     CDS             467..2743
                     /locus_tag="VLJ38_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3160 domain-containing protein"
                     /protein_id="HSU40177.1"
                     /translation="MKKAKILAICAIAGGALACSSTRASDSPGSKPVPGGTGGAGGSG
                     PQFEDPGVVVQTTESNATATQRQTLEQKLAPVADLSAADLMARYPASFAPAPSYDLTT
                     VAGLNTLQASNLALNAAERAELADHGLVISRRQQWPTFLYGYATLYMQDLPLYVSADS
                     ILFAVHRSYDAILSRVESEILVSDLGALLGGMRARLAAGDAGFAAGAVRKDADVYLAV
                     AEALLAGDAGAPVAGGDAGLVRDLVARANAAQGEQTVKLFGVTRDEDFSQFEPRGHYT
                     DSDVLKHYFRAMMWLGRIDLRLLETQSDGSQVFRRRQLEAALALRDLVGADLLPNFAR
                     IDDTVTAFVGEHDYMQLHELGKLLTELGVSDPAGLAALDDVTIAQKIAAGGYGAQRIS
                     SHIMINGLGSGTLPLSASFALFGQRYVVDSHVFSNVVYDRAGGGTIPRMLPNPLDAAF
                     AALGNNQAATLLTDELARYPYAPDLAAMRVLVDEHPADFWQENLYNQWLGALRTLAPS
                     AAPVATDPGLPPVARSALWGKRLLSAELASWAELRHDTILYAKQSYSAGASCDFPDAY
                     VDPYPDFYARIGDYAQFGEQLADELGKAPGANALVDGIRSHFSLLGDVAGRLKAMAEH
                     ELTGAPFTDEMMTFINDAVTLQSICGGDSVDHAGWYGQLFYADGLNFDPTIADVHTQP
                     TDEAGNPVGRVLHVGTGPARLMVVVSEGCSGPRAYAGLASSYYEKVTDNFERLTDEAW
                     AESVYTEADPSWLADVLK"
     gene            complement(2940..>3745)
                     /locus_tag="VLJ38_11430"
     CDS             complement(2940..>3745)
                     /locus_tag="VLJ38_11430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40178.1"
                     /translation="RAKSAGARVFWCALAALALLPALHNGRQVWALDYLDSTAVALGP
                     ELDERTLVLTEAGRVPYWTRARVIDVVGLNDPRSAKHPPDRSYIASLRPDVIMYHSAG
                     TLDEAAISSLPPEGAEGQVVSVPAAALASALVEPYRSLLTTVGADFPKQVLPHRFAAA
                     ALTNYVTTTNEFDIFLVRYGAGFRHVWAVRRGQPFSASIERTLQESAWRPYLSYADAK
                     GIRVGSLPCRLLSGLARHLGPRSLGWPQIPTCDVQRAESSPFRARHERP"
BASE COUNT          646 a         1253 c         1228 g          618 t
ORIGIN      
        1 agtcgtccaa gctcgcgtga acgagccgga ccgtcaattg gcggccgtcg cctcggatca
       61 cgagctcgtc cgtgccggtc gccacgcact cgtcaccgcg ggccctcgcc cactccgata
      121 gttgaacctt ggcggccgcg agcacactcg catcggcatc gaccgcaacg tagtgcgcgt
      181 gctctagcaa accccagtcc gccgcgcgta cgagcatcga gcagctgcct gctccgagat
      241 cgaggacgcg cgtgggttca ccccccgcgc cggacgcgat ggccgccttg gcagcggcga
      301 agaccgttcg attgatggcg gcgtcgtcga tcgagacttt cgcgcgcaaa tagcgaacga
      361 acgcgtcctg catgacgtcg gactctaacc cgggctcgac tcaccggatc cggcatgctt
      421 actgcagctt gcggcagtgc caacggctcg aaagctcgaa aacagcatga aaaaagcgaa
      481 aatcctcgcc atttgtgcga tcgccggcgg cgcgcttgcg tgctcgagca cgcgcgcctc
      541 tgacagtcca ggcagcaagc ctgtgccagg tggcacaggc ggcgccggcg gtagcgggcc
      601 acagttcgag gatccgggcg tcgtcgttca gaccacggaa tccaacgcga ctgccacgca
      661 gcggcaaact ctggaacaga aactcgcccc ggtcgctgat ctatcggccg ccgatctgat
      721 ggcgcgctac ccggcgagct ttgcgccggc acccagctac gatttgacca cggttgccgg
      781 cctcaacacg cttcaggcct cgaaccttgc cctgaacgcc gccgagcggg ccgagctcgc
      841 cgaccacggc ctcgtcatca gccggcggca gcagtggccg acgttccttt acggttacgc
      901 gaccctgtac atgcaggatc tgccgctcta cgtgtcggcc gactcgattc tattcgctgt
      961 tcaccgctcg tacgacgcga tcttgtcgag ggtcgagagc gagatcttgg tctcggacct
     1021 gggcgcgctg ctcggcggca tgcgtgcgcg gctcgcggct ggcgacgcag gatttgccgc
     1081 gggcgccgta cgcaaggacg cggacgtgta tctggctgtc gccgaggcgt tgctggcggg
     1141 cgatgccggc gcacccgtag ccggcgggga cgccgggctc gtccgcgatt tggtggcaag
     1201 agcgaacgcc gcgcaaggcg agcaaacggt caagctcttc ggcgtcacgc gcgacgagga
     1261 cttttcgcag ttcgagccgc gggggcacta cacggattcg gacgtcctca agcactactt
     1321 ccgcgcgatg atgtggctcg gccgcatcga cttgcggctg ctcgagactc agtccgacgg
     1381 cagccaagtc tttcgtcgcc gtcagctcga ggcggcgctg gctttgcgcg atctggtcgg
     1441 agcggacctc ttgccgaact ttgctcgcat cgacgacacg gtgaccgcct tcgtcggcga
     1501 gcacgactac atgcagctcc acgagctcgg caagctcttg accgagctcg gcgtgagcga
     1561 ccccgcagga cttgccgccc tcgacgacgt gaccatcgcg cagaagatcg ccgcgggcgg
     1621 ttacggcgct cagcgcatct cgagccacat catgatcaac ggcttgggga gcggcacgct
     1681 gccgctttcg gcgtcatttg cgctcttcgg ccagcgctac gtcgtcgaca gccacgtgtt
     1741 ttcgaacgtc gtctacgacc gcgcgggcgg cggaacgatc ccacggatgc tgccgaaccc
     1801 gctcgatgcg gcgtttgccg cgctcggcaa caatcaggca gcgacgctgc tcacggacga
     1861 gctcgcgcgt tatccgtacg ccccggatct cgcggcgatg cgcgtgctcg tcgatgagca
     1921 cccggcggat ttctggcaag agaacctgta taatcagtgg ctcggcgcgc tgcggacgct
     1981 cgcgccatcc gctgccccgg tcgcgaccga tccgggtctg ccgcccgtcg cgaggagcgc
     2041 gctctggggc aagcgactgc tctcggccga gctcgcctcc tgggcggagc tccgtcacga
     2101 cacgatcctg tacgccaagc agtcgtactc cgccggagcc agctgcgact tcccggacgc
     2161 ctacgtcgat ccttatcccg atttttacgc caggatcggc gactacgcgc agttcggcga
     2221 acagctcgcc gacgagctcg gcaaggcgcc gggcgcgaat gctctcgtcg acggcatccg
     2281 ctcccacttc agcctactcg gtgacgtggc cgggcgcctc aaggccatgg cggagcacga
     2341 gctcacgggc gcgccgttca ccgacgagat gatgacgttc atcaacgacg ccgttaccct
     2401 gcagtccatc tgcggcggcg actcggtcga tcacgccggc tggtacggcc agctgtttta
     2461 cgctgacgga ttgaatttcg atccgacgat cgccgatgtc cacacgcaac cgacggacga
     2521 ggcaggcaac cccgtcgggc gcgtgctcca cgtgggcacg ggccctgccc gcttgatggt
     2581 cgtcgtgagc gaaggttgca gcggaccgcg cgcttacgca ggccttgcct cttcgtatta
     2641 cgagaaggtg acggacaatt tcgagcgcct cacggacgag gcctgggccg agagcgtgta
     2701 cacggaagcc gatccgagct ggctcgcgga cgtgctgaag taggtgctga agctcgcgcg
     2761 ggtcagtgcg tctcgtcggc gcgcggcgca gcagcgagcg tgacgttgtg ccccccgaac
     2821 gcctgggcgt tcgtcagcgc taccttcacg atcgctcgac gcgccgcttc gggcacgtga
     2881 cggcaagctc gcccgcgcct cccagcgcag gcaagccaag aggaagagaa attgactcac
     2941 tacgggcgtt cgtggcgagc gcggaatggc gatgattctg cgcgttgaac gtcacaggtt
     3001 gggatttggg gccagccgag ggagcgcggg cccaggtggc gggccagtcc agataacaat
     3061 cggcacggga gtgaacccac ccggatgccc ttcgcgtccg catacgacaa gtacgggcgc
     3121 caagcgctct cctggagagt ccgctcgatc gacgcgctga acggctgtcc tcgacggacc
     3181 gcccagacat ggcgaaaccc ggctccgtat ctgaccagga aaatatcgaa ttcgttggtt
     3241 gtagtgacgt agttggtcaa ggctgcggcg gcgaagcgat gcgggagcac ctgcttcgga
     3301 aaatccgcgc cgaccgtcgt gaggaggctt cgatagggct cgacgagcgc gctggccaac
     3361 gctgccgcag gcacgctgac cacctgccct tcggcacctt ccggcggaag cgagctgata
     3421 gccgcttcgt cgagggttcc ggcgctgtga tacatgatga cgtcaggccg gagcgacgcg
     3481 atgtacgaac ggtcgggcgg atgcttcgca gagcgaggat cattcaggcc gacaacgtcg
     3541 atgacgcgtg cgcgcgtcca gtaagggacg cggccagcct ccgtcagtac gagcgtgcgc
     3601 tcgtccagct cggggccgag cgcaacggcc gtagagtcca aatagtccag cgcccacacc
     3661 tgccgcccgt tgtgcagcgc gggaaggagc gcaagcgccg caagcgcgca ccagaacaca
     3721 cgagcgcccg cgctcttcgc gcggg
//
LOCUS       DATIML010000665         3539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_715081, whole genome shotgun sequence.
ACCESSION   DATIML010000665 DATIML010000000
VERSION     DATIML010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3539
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_715081"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2426
                     /locus_tag="VLJ38_11435"
     CDS             <1..2426
                     /locus_tag="VLJ38_11435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU40179.1"
                     /translation="GRRATARQALLNLANTDLYLGRLARARASIEALEEQREQLPEVL
                     KPQLLGLKAELYARQGQLERAVALFDARAEANEKLGHGVDAAEAWLEGVLTSARAGNV
                     DLAALRKRVARAREALGDAPAHKALALLATARVAELAGDERGARSAFDGAIDAARECG
                     QKEWIWRALEARAALEEQGGQPLLARRDREEALAVLEDIGARLPRDLREVYWNDARRR
                     QLRASVPGGVATATTELVPWLPPKAVGVRAAATTLTGRSSATSQLVTPLEHKLARILE
                     VNGELAREIDLARLTARITDHAVDLARAERGFVLLRGADGALAVHTSRTRGADEAHAE
                     FSRSIAEDVMASREPIVAVNAQSDARVGAYASVHQMMLESVACVPILAPNGDAIGALY
                     LETRLKRGSHFERELPTLRAFADQVAIALESSRLIRENQTRAEELARANAGLEEARVR
                     LEEALGDRTEELRRTRRRLRDARETLYGHFGYHGLVGTSAAMRRVYALIDRLKETDVP
                     VLITGESGTGKEMVARAIHASSPRSKAKFLGVNCGAIPENLLESELFGHVKGAYTGAD
                     RDRKGLFRECDQGSILLDEIGETPKKMQASLLRVLQEHTVRSVGGTTEEPIDVRVLFA
                     TNRNLEELVRAGEFREDLYYRIHVVELRLPSLRDRSEDIPQLVDHFFGIFAARYKREK
                     GTLSRDALRRLSDYDWPGNVRQLENVLLNAWVMSEGPELLAEDIELPDGWTPRPPSGA
                     RPESHAPPRERAPAAPRKGTVSEHRRQERERILDALRSCNWNRVKAAEISGIPRRTFY
                     RRLREYGIQ"
     gene            complement(2457..>3539)
                     /locus_tag="VLJ38_11440"
     CDS             complement(2457..>3539)
                     /locus_tag="VLJ38_11440"
                     /inference="COORDINATES: protein motif:HMM:NF015114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40180.1"
                     /translation="QIVWQDTAAKVLGKIGDPAAIEPLMKVMLDPTKGMTEFTTVQIT
                     SVLALVKIGKPAADAAAKLLKSDYEKLQTFELQRIREVTGSDEKGKPWVQTAAVILGT
                     IGRQDSIPVMIEAMKSEKEDSTKAVIARELTKIPATPESIEAFKETFLSIPLSAELPS
                     GGGAIDALIEASGRFCDPSLASWMVETAGKLKGDADDRKAAQAAMTVTALKLVKADGL
                     PEVKTAVDRYGTDLEKGLYKQVESALGACKDDVSCYLGLIQKPENQKVENQFVGIKAG
                     YMIAILGNEAARDKLVDELGNIRNAGLRFVASQAIDKLSPKGSKNAADKLNGIITTNA
                     KSPDRDKAAGDSALKEVMYRLYARSG"
BASE COUNT          537 a         1217 c         1214 g          571 t
ORIGIN      
        1 cgggccgccg cgccaccgct cgccaagcgc tcctgaatct cgcgaacacc gatctgtacc
       61 tcggccgcct cgcgcgggca cgcgcgagca tcgaggcgct cgaggagcaa cgcgagcagt
      121 tgcccgaggt gctcaagccg caactcctcg ggctcaaagc ggagctctac gcgcgacaag
      181 ggcagctcga gcgcgccgtc gcgctgttcg acgcgcgcgc cgaagccaac gaaaagctcg
      241 gtcacggcgt ggacgccgcg gaggcgtggc tcgagggcgt gctcacgtcc gcgcgtgcgg
      301 gcaacgtcga tttggcggcg ctcagaaagc gcgtggcgcg tgcccgcgag gcgctcggtg
      361 acgccccggc gcacaaggcg ctggcgctgc tcgcgaccgc gcgcgtcgcc gagctcgccg
      421 gagacgaacg cggcgcgcgc tcggcgttcg atggcgcgat cgacgccgcg cgcgagtgtg
      481 gccaaaagga gtggatctgg cgcgcgctcg aggcgcgcgc cgcgctcgag gagcaaggcg
      541 gacagccgct gctcgcgcgt cgcgaccgcg aagaggcgct cgccgtgctc gaggacatcg
      601 gcgcgcggct gccgcgggac ctgcgcgaag tttattggaa cgacgcgcga cggcggcagc
      661 tgcgggccag cgtgccgggc ggggtcgcga cggcgacgac cgagctcgtg ccgtggctgc
      721 cgcccaaggc cgtcggcgtg cgcgccgccg cgacgacgct cacggggcgg agcagcgcga
      781 cctcgcagct cgtgacgccg ctcgagcaca agctcgcgcg catcctcgag gtcaacggcg
      841 agctggcgcg cgagatcgat ctggcgcgac tgacggcgcg aatcaccgat cacgcggtcg
      901 acctcgcgcg cgccgagcgc ggcttcgtgc tcctgcgcgg cgcggatggc gcgctcgccg
      961 tgcacacgtc gcgcacgcgc ggcgccgacg aggcgcacgc cgaattttcg cgctcgatcg
     1021 ccgaagacgt catggcgagc cgcgagccga tcgtcgccgt gaacgcgcag agcgacgcgc
     1081 gcgtcggcgc gtacgcttcc gtgcaccaga tgatgctcga gtctgtcgcg tgcgtgccga
     1141 tcctcgcgcc gaacggcgac gccatcggcg cgctctatct cgaaacccgg ctcaaacgcg
     1201 gctcgcactt cgagcgcgag ttgccgacgc tgcgcgcctt cgcagaccag gtcgcgatcg
     1261 cgctcgagag ctcgcgcctc attcgcgaaa accagacgcg cgccgaggag ctcgcgcgcg
     1321 ccaacgccgg actcgaggaa gctcgcgttc gcctcgaaga ggcgctcggc gatcgcacgg
     1381 aagagctccg gcgcacgcgc cgccggctgc gggacgcgcg cgagaccctg tacggccact
     1441 tcggctacca tggcctggtc ggcacgagcg ctgccatgcg ccgcgtctac gcgctgatcg
     1501 atcgcctcaa agaaaccgac gtgcccgtgc tcatcaccgg tgagagcggc acggggaagg
     1561 aaatggtcgc gcgcgccatc cacgcctcgt cgccgcgcag caaagccaaa ttcttgggcg
     1621 tcaactgcgg agccatcccc gaaaatctgc tcgagagcga gctgttcggg cacgtcaagg
     1681 gggcgtacac gggcgccgat cgcgatcgca aagggctctt tcgcgagtgc gaccagggca
     1741 gcattttgct cgacgagatc ggcgagacgc cgaagaagat gcaggcgtcg ctcttgcgcg
     1801 tgttgcagga gcacacggtg cgctccgtcg gcggtacgac cgaggagccc atcgacgtgc
     1861 gcgtgctctt tgcgaccaat cgaaacctcg aggagctcgt gcgtgccggc gagtttcgcg
     1921 aggatctgta ctaccgcatc cacgtcgtcg agctgcgctt gccctcgctg cgcgaccgca
     1981 gcgaagacat cccgcagctc gtcgatcact tcttcgggat tttcgccgcg cgctacaagc
     2041 gcgagaaggg cacgctctcg cgtgacgcgc tccggcgcct cagcgactac gattggcccg
     2101 gcaacgtgcg ccagctcgaa aacgtgctgc tgaacgcttg ggtcatgagc gagggtcccg
     2161 agctcttggc ggaagacatc gagctgccgg acggctggac gccgcggccg ccttcggggg
     2221 cacgcccgga gagccatgct cctccacgcg agcgcgcgcc ggcggcgccg cgcaaaggca
     2281 ccgtctcgga gcatcgccgg caagagcggg agcgcatcct cgatgcgctc cgctcctgca
     2341 attggaaccg cgtgaaggcc gcggaaatca gcggcatccc gcgtcgcacg ttttaccgcc
     2401 gcctgcgcga gtacgggatt cagtagcgga cctacgcgtg cggcggtgcg ccgcgtttag
     2461 ccgctgcgcg cgtaaaggcg gtacatcact tccttgagcg ccgagtcacc cgccgccttg
     2521 tcgcggtcgg gactcttcgc gttcgtggtg atgatgccgt tcagcttgtc ggccgcgttc
     2581 ttcgagccct tgggcgagag cttgtcgatg gcttgcgagg cgacgaacct gaggcctgcg
     2641 ttgcggatgt tgccgagctc gtccaccagc ttgtcgcgcg ccgcctcgtt gccgaggatc
     2701 gcgatcatgt agccggcctt gataccgacg aactgatttt ccaccttctg gttctcgggt
     2761 ttctggatca ggccgagata acagctcacg tcgtctttgc aggcgccgag cgcgctctcg
     2821 acctgcttgt acaggccctt ctcgagatcg gtgccgtaac ggtcgacggc cgtcttcacc
     2881 tcgggcaggc cgtcggcctt cacgagcttg agcgccgtga cggtcatggc cgcttgcgcc
     2941 gccttgcgat cgtcggcgtc gcccttcagc ttgccggccg tctcgaccat ccacgaggcg
     3001 agcgagggat cgcagaagcg cccggacgct tcgatcagcg cgtcgatggc cccgccgccc
     3061 gacggcagct cggcgctgag cgggatcgag aggaacgtct ccttgaacgc ttcgatcgac
     3121 tccggtgtcg cggggatctt cgtgagctcg cgcgcgatga cggctttggt ggagtcttcc
     3181 ttctcgctct tcatcgcctc gatcatcacc gggatcgagt cctgccggcc gatggtgccg
     3241 aggatgaccg cggccgtctg cacccacggc ttgcccttct cgtcggagcc cgtgacctcg
     3301 cgaatgcgct ggagctcgaa ggtctggagc ttctcgtagt cgctcttcaa gagcttggct
     3361 gccgcgtccg ccgccggctt tccgatcttc acgagcgcga gcacgctcgt gatttgcacg
     3421 gtcgtgaact cggtcatgcc cttggtggga tcgagcatca ccttcatgag cggctcaatc
     3481 gctgcggggt cgccgatttt cccgagcacc ttggcggccg tgtcttgcca gacgatctg
//
LOCUS       DATIML010000666         2066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5047091, whole genome shotgun sequence.
ACCESSION   DATIML010000666 DATIML010000000
VERSION     DATIML010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5047091"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VLJ38_11445"
     CDS             complement(<1..1015)
                     /locus_tag="VLJ38_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSU40181.1"
                     /translation="MRIALLYPPPWKIAERGQAPIGPPEGPPHDYREGDLDADFYQTP
                     YGLFALGAQGIRAGHRVKVLNLSGFAWSRVEAVVGELEADVYGLSCWTANRRGVALVA
                     REIRRRHPRACIVVGGPHATPLAREMLEHHPDIDVVTLGESDDTFSEIVQRLEAGQSL
                     DGLAGALVRTSRGIEAGPERPSVRDLDTLECPHRYYDTHIVMTSRGCPWACTFCGAET
                     TWGRGFRGHSVPYVLDMLEAALARVRVRMLQIKDDTFTTNKKRVLELCRGIRERKLNF
                     LWSCDTRVDVLSEELLQEMRLAGCQRLSLGVESGSQRILDAIHKNITVDEIVAATAMA
                     KRHG"
     gene            complement(1106..>2066)
                     /locus_tag="VLJ38_11450"
     CDS             complement(1106..>2066)
                     /locus_tag="VLJ38_11450"
                     /inference="COORDINATES: protein motif:HMM:NF014900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate formate lyase family protein"
                     /protein_id="HSU40182.1"
                     /translation="QVTLDTGRVQYESDDLLREFWGDDAAIACSVSATCIGKQMQFFG
                     ARVNLAKCLLYAINGGRDELSGEQIMPPFEPVRGEVLELEQVMVRFEHAMDWLARTYV
                     NAMNCIHYMHDKYAYERLEMALHDYDPERSMAFGIAGLSIVADALSDIANTRVRVVRD
                     ASGLVVDYAADGDFPKFGNNDDRVDRFASEVVEKFMKKLRQYPAYRGAEHTQSVLTLA
                     SNFVYGKHTGNTPDGRRSGEPFAPDANPLQGRDTLGLFASALSVAKLPYEFCQDGISL
                     AATIAATALGNARPEQVEQLIAALDDLFDAGLYHINVHLDPAT"
BASE COUNT          352 a          661 c          702 g          351 t
ORIGIN      
        1 cgccgtgacg cttggccatc gcggtcgccg cgacgatctc gtccacggtg atgttcttgt
       61 gaatcgcgtc gaggatgcgc tgcgagccgg actcgacgcc gagcgagagt cgctggcagc
      121 ccgcgagccg catctcctgc aagagctcct cgctgagcac gtcgacgcgc gtgtcgcagc
      181 tccagagaaa gttcaacttg cgctcgcgga tgccgcggca gagctcgagc acgcgcttct
      241 tgttggtggt gaaggtatcg tccttgattt gcagcatgcg cacgcggacg cgcgcgagcg
      301 ccgcttcgag catatcgagg acgtacggca ccgagtgccc gcgaaaaccg cggccccagg
      361 tcgtctcggc gccgcaaaag gtgcacgccc acgggcagcc ccgcgacgtc atcacgatgt
      421 gcgtgtcgta gtagcgatgg gggcactcga gcgtgtcgag atcgcgcacg ctcggccgct
      481 cggggccggc ttcgatgccg cggctcgtgc gcacgagcgc tcccgcgagg ccgtcgagac
      541 tttgacccgc ctcgaggcgc tgcacgattt ccgaaaacgt gtcgtcgctc tcgccgagcg
      601 tcacgacatc gatgtcgggg tggtgctcga gcatttcacg cgcgagcggc gtcgcgtgcg
      661 gcccgccgac gacgatgcac gcgcgtggat ggcggcgccg gatctcgcgc gcgacgagcg
      721 ccacgcctcg acgattcgcc gtccagcacg atagcccgta aacgtccgcc tcgagctcgc
      781 cgacgaccgc ctcgacgcgc gaccaggcga aaccggacaa attgagcacc ttgacgcgat
      841 gccccgcgcg gatcccctga gcgccgagcg cgaacaagcc gtatggcgtc tgataaaaat
      901 ccgcgtcgag atcgccttct cggtaatcgt gcggcggccc ctcgggtggc ccgatcggcg
      961 cctgaccgcg ctccgcgatc ttccacggtg gcggatacaa aagagcgatg cgcatcgaac
     1021 gctgaggata caacggccga cgcagagcgt ctaagcccct tggccgaccg cctcgcccgg
     1081 aatttgcgcg cagctcggga ttcggtcacg tcgcggggtc gaggtggacg ttgatgtggt
     1141 agaggccagc gtcgaagagg tcgtcgaggg cggctatcag ctgctccacc tgttcggggc
     1201 gcgcgttacc gagggcggtc gcggcgatcg tggcggcgag cgagatgccg tcctgacaga
     1261 actcgtaagg gagcttggcg accgacaagg ccgaggcaaa caatccgagt gtgtcccggc
     1321 cttgcagtgg attggcatcc ggggcgaaag gctcacccga ccgacggccg tcgggggtgt
     1381 tgcccgtgtg cttgccgtaa acgaagttgg acgcgagcgt gaggacggac tgggtatgct
     1441 ccgcgccgcg gtaggcgggg tattggcgca gctttttcat gaacttttcg acgacttcgc
     1501 tcgcgaagcg atcgacgcgg tcgtcgttgt tgccgaactt gggaaagtcg ccatcggccg
     1561 cgtagtcgac cacgaggccc gaggcgtcac gcacgacgcg cactcgcgtg ttcgcgatgt
     1621 cggagagcgc atcggcgacg atggacaatc ccgcgatgcc gaacgccatg ctgcgctcgg
     1681 ggtcgtagtc gtgaagggcc atctcgagcc gctcgtacgc gtacttgtcg tgcatgtagt
     1741 ggatgcagtt catggcgttc acgtacgtgc gggcgagcca atccatcgca tgctcgaagc
     1801 gcaccatcac ctgctcgagc tcgagcacct cgccgcgcac cggctcgaac ggaggcatga
     1861 tctgctcgcc gctgagctcg tcgcgtccgc cgtttatcgc atagagcaga catttggcca
     1921 ggttcacgcg cgcgccgaag aactgcatct gcttgccgat gcaagtggcg gacacagagc
     1981 aggcgatggc ggcgtcgtcg ccccagaact cgcgcaagag gtcgtccgat tcgtattgaa
     2041 ccctgccggt gtcgagcgtg acctgc
//
LOCUS       DATIML010000667         2248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5336619, whole genome shotgun sequence.
ACCESSION   DATIML010000667 DATIML010000000
VERSION     DATIML010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5336619"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VLJ38_11455"
     CDS             <1..648
                     /locus_tag="VLJ38_11455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40183.1"
                     /translation="DDAEAEPVLAVSAEEEEEQPPASSRRSRGPATLDEVMANASPAD
                     SEREIPVKTPPPESGPQEALPATGLEAPRLPDIENLEADLSGPPSMGPTAEQLGETIE
                     LEAPRGPELEIDITVSESDADVPAPAEELEVTLPRASLQSGLYDVSIAAPPSLDVPAP
                     EVHVAVTVPAVASSPENPERVARPALGATDVAEVRFGTRAAEKSFLELLDASLGL"
     gene            733..1044
                     /gene="rplU"
                     /locus_tag="VLJ38_11460"
     CDS             733..1044
                     /gene="rplU"
                     /locus_tag="VLJ38_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HSU40184.1"
                     /translation="MAYAIIRSGGKQYRVAEGDTVRVDLMSGAAGDKIKFEDVLMIGG
                     DEPKIGSPLVTGAAVEAEVVGQVQGDKLVVFKFRKRKRSRRKAGHRQSFTAVKITKVQ
                     G"
     gene            1050..1313
                     /gene="rpmA"
                     /locus_tag="VLJ38_11465"
     CDS             1050..1313
                     /gene="rpmA"
                     /locus_tag="VLJ38_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HSU40185.1"
                     /translation="MAHKKGGGSTRNGRGSNAQFRGVKVFGGEFVRAGGILVRQVGQT
                     INPGRNVGVGSDYTLFALVDGTVTYEHASRTKKRVSVYPNAAN"
     gene            1320..2171
                     /locus_tag="VLJ38_11470"
     CDS             1320..2171
                     /locus_tag="VLJ38_11470"
                     /inference="COORDINATES: protein motif:HMM:NF019887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HSU40186.1"
                     /translation="MSTRYKLLVSDIDGTLVGPAGNIRPADMAAVRSLVERGVHVTLC
                     TGRMFTGTQPLALELGLDAPVACVDGSHVAHARTGTALACAGLTPEAITLFCEVLRRH
                     DAAPFALSDELLFHDDDGHAHLDYMRLWSRRTTVVRDMLVSDAWHRGRSVPAMLALGT
                     EERIRAAAEALGGRAESLLQTIVFESQSEYDDGTRPWAVLVRAAGIDKGTGIEWLARH
                     YGISLDEVITVGDWLNDVPMLERAGLSFAMAQAPDDVKRAADVVLDSDHETGGAIAEV
                     ARRAGLL"
BASE COUNT          378 a          757 c          776 g          337 t
ORIGIN      
        1 gatgacgcgg aagccgaacc cgtcctcgcc gtttcggcag aggaggaaga agagcaaccg
       61 ccggcgtcgt cgcgccgctc gagaggtcct gcgacgctcg acgaggtcat ggcgaacgcg
      121 tcgcccgcgg acagcgagcg cgagatcccg gtgaagacgc cgccgcccga gtcggggccg
      181 caagaagcgc tgccggcaac cggtctcgaa gcgccgcgcc tgccggacat cgaaaatctc
      241 gaagccgatc tcagcgggcc gccgtcgatg ggtccgaccg cagagcaact cggcgagacg
      301 atcgagctcg aagcgccgcg cggtccggag ctcgagatcg acatcaccgt ctccgagtcg
      361 gacgccgacg ttccggcgcc cgcggaagag ctcgaagtga cgctgccgcg cgcgtcgctg
      421 cagtcgggac tttacgacgt gtcgatcgcg gctccgccgt cgctcgacgt gcctgcgccc
      481 gaggtgcacg tcgcggtgac ggtgcccgcg gtcgcgtcga gcccggagaa ccccgaacgc
      541 gtggcccgcc cggccctcgg cgcgaccgac gtggcggagg tccgtttcgg cacgcgagcg
      601 gccgaaaaga gctttctcga gctcctcgac gcctcgctcg gcctgtgagt ccgcgttttc
      661 agcggcaaaa acgctagatt cacccgctgc ttgcgaggcc gtaggtcatc ggctaccttc
      721 cgcgcccccc aaatggccta cgcaatcatc cgctctggcg gcaaacagta ccgagttgcc
      781 gagggcgata ccgtccgcgt cgatctgatg tcgggcgcgg cgggcgacaa gatcaagttc
      841 gaggacgtgc tgatgatcgg cggcgatgag ccgaagatcg gaagtcccct ggtcaccggc
      901 gccgcggtcg aagcggaggt cgtcggccag gtgcagggcg acaagctcgt cgtcttcaag
      961 ttccgcaagc gcaagcgctc gcgtcgcaag gcgggccacc gccagagctt cacggcggtc
     1021 aagatcacca aggtgcaggg ctaactccga tggcacataa aaaaggcggc ggctcgacgc
     1081 gtaacggacg cggctcgaac gcgcagttcc ggggcgtcaa ggtgttcggc ggcgagttcg
     1141 tgcgcgccgg tgggatcctc gtgcggcagg tcgggcagac catcaacccg ggccgcaacg
     1201 tcggcgtggg cagcgattac acgctgttcg cgctcgtcga cggcaccgtg acgtacgagc
     1261 acgcgagccg caccaagaag cgcgtttcgg tttatccgaa cgccgcgaac tgagtcgcga
     1321 tttccacgcg ttacaagctc ctcgtcagcg acatcgacgg gacgctggtc ggcccggctg
     1381 gaaacatccg cccggctgac atggcggcgg ttcgatcgtt ggtcgaacgc ggcgtgcacg
     1441 tgacgctctg cacggggcgc atgttcacgg gtacgcagcc gctcgcgctc gagctcggtc
     1501 tcgacgcccc tgtcgcgtgc gtcgacggca gtcacgtcgc gcacgcccgc acgggcaccg
     1561 cgctcgcctg cgccggtctc acgcccgagg ccatcacgct tttttgcgag gtgctgcgcc
     1621 ggcacgacgc cgcgcccttt gctctttcgg acgagctcct gttccacgac gacgacggac
     1681 acgcgcacct cgactacatg cgcctgtggt cgcgccgtac gaccgtcgtg cgcgacatgc
     1741 tcgtgagtga cgcatggcac cgtggccgca gcgtgcccgc gatgctggcg ctcgggacgg
     1801 aagagcgtat ccgtgccgcg gccgaggccc tcggcggtcg tgcggagagc ttgctccaga
     1861 cgatcgtttt cgaatcgcag agcgaatacg acgacgggac gcggccctgg gccgtgctcg
     1921 tgcgcgccgc cggcatcgac aagggtacgg gcatcgagtg gctcgcgcgg cactacggga
     1981 tctcgctcga tgaagtcatt acggtcggtg actggctgaa cgacgtgccg atgctcgaac
     2041 gcgcggggct ttcgttcgcg atggcgcaag cgccagacga cgtaaaacgc gccgccgacg
     2101 tggtgctcga cagtgatcac gagaccggcg gcgccatcgc cgaggtcgcc cggcgcgccg
     2161 ggctgttatg acgcgacgcg cgtgctcggc tcggcgctac actgcagccc tgctgcggtg
     2221 atggaaccaa agaagcaccc gcagacaa
//
LOCUS       DATIML010000668         3558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1002714, whole genome shotgun sequence.
ACCESSION   DATIML010000668 DATIML010000000
VERSION     DATIML010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3558
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002714"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..941
                     /locus_tag="VLJ38_11475"
     CDS             <1..941
                     /locus_tag="VLJ38_11475"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSU40187.1"
                     /translation="ELREHQPGDPFRRIAWRASARRAQLLVREYEREERDVVWVLLDA
                     SVELWSGEPGRAPLDTAIDEAATVALRHLRRGDHVGLAIVAARTLAFIEPGSSPGHAL
                     KLVNALATATGCLDPERSGLDEADVGLRVLEHLRPLDVRGGATLRPGELDRIARRAER
                     LVATRALFRGVSVAAATRRERQLRGYLAAFGLGSPARIEPDRPRTDAELARLLVRLGR
                     ERQKPSLVYLWSPPPDPETRPALERALVTLPRRRFGLNWMSVPLDAGLGGDVSGVARV
                     VAETVSLRAQAAMRRGELALRRLGVRAAPRQAPGRP"
     gene            938..1804
                     /gene="rsmA"
                     /locus_tag="VLJ38_11480"
     CDS             938..1804
                     /gene="rsmA"
                     /locus_tag="VLJ38_11480"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HSU40188.1"
                     /translation="MRKPSAPAPAVASGDNARAVLARHGVLPKRHFSQNFLLDRGLCR
                     RIAEYVAPEGAFVIEVGAGLGALTEPLVERSREVVAIERDRDLVPALTAELRPSIDAG
                     RLRIVEADAKSFDYESELERAAPPRAVVGNLPYHLSGVLLETFVRLAPRLERAGALVQ
                     LEVAARLVAPAGGDDYGALSVFTQAAYRVTRPLVVRRGAFFPQPGVDSALVVFEPLPT
                     PLAQETVRFRELVKAAFSQRRKKLKNAWSGVLAPPELARAAERAGIDLDRRGETLSVA
                     EFARMTAEADAR"
     gene            1801..2256
                     /locus_tag="VLJ38_11485"
     CDS             1801..2256
                     /locus_tag="VLJ38_11485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40189.1"
                     /translation="MTLLCRRTFVVTLALTAAFGCRRAADAPPVHARFGVFFGGQLQE
                     REEIPLVFDRARQSMGVRFEFSTPPASEGRVTWELEKPRAGKGKNLGNVVEYGEARTR
                     PGEPVLDIPLAFREGDRAGAWRIRVALDGKNVLDRPFKVVPATDSPADD"
     gene            complement(2303..2809)
                     /gene="atpC"
                     /locus_tag="VLJ38_11490"
     CDS             complement(2303..2809)
                     /gene="atpC"
                     /locus_tag="VLJ38_11490"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HSU40190.1"
                     /translation="MAETLDLEIVTPEGVKLAQAVEIFTAPGVDGEFGVMPRHQPMLA
                     ALTAGIVTFTHSGVLETVAIGAGFAEVADDRAVVLTAHFTTKTEIDPVKVRLELKEVD
                     EALDRYAGDPNGPEYGALVARELWAATQLELYGDPPPARVRSQNEIALTQVEQYRAHP
                     DGAPSEGV"
     gene            complement(2820..3323)
                     /locus_tag="VLJ38_11495"
     CDS             complement(2820..3323)
                     /locus_tag="VLJ38_11495"
                     /inference="COORDINATES: protein motif:HMM:NF012236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40191.1"
                     /translation="MPLTDDLTDPAPATTFAHLDATTVLSRAISEKGIYPAVDPLDST
                     STMLSPAIVGDEHYKVARQVQQTLQRYKDLQDIIAILGLDELSEDDKLTVSRARKIER
                     FLSQPFFVAATFTGRPGRYVPLKETIAGFQEILSGALDDLPEQAFYLQGNIDDVKAAA
                     AKLKAAA"
     gene            3342..>3558
                     /locus_tag="VLJ38_11500"
     CDS             3342..>3558
                     /locus_tag="VLJ38_11500"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The beta chain is a
                     regulatory subunit; Derived by automated computational
                     analysis using gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HSU40192.1"
                     /translation="MQEVLQRYKELQDIIAILGLDELSEEDKVIVSRARKVQKFLAQP
                     MFVAEVFTGLPGIFTPVEETIESFEMLL"
BASE COUNT          498 a         1260 c         1253 g          547 t
ORIGIN      
        1 gcgagctccg cgaacaccag ccaggcgatc cgttccggcg catcgcgtgg cgagcgtccg
       61 cgcgacgcgc acagctgctc gtgcgtgagt acgaacgcga ggagcgcgac gtggtctggg
      121 tgctgctcga cgcctccgtc gagctctggt cgggcgaacc cggccgcgcc ccgctcgaca
      181 cggccatcga cgaggcggcg accgtggctc tccgtcatct ccggcgcggc gaccacgtcg
      241 ggctcgcgat cgtggcggcg cgcaccctcg ccttcatcga gcccggctcg agcccaggcc
      301 acgcgctcaa gctcgtgaat gcgctcgcga cggcaaccgg ctgtctcgac ccggagcgca
      361 gcggcctcga cgaggccgac gtggggcttc gcgtgctcga acatttgcgg ccgctcgacg
      421 tgcgcggcgg cgcgacgctc cggccgggtg agctcgatcg catcgcgcgg cgcgccgagc
      481 gcttggtcgc gacacgcgcg ctctttcgcg gcgtcagcgt ggcggccgcc acacgccgcg
      541 aacggcaatt gcgcggctat ctcgcagcct tcgggctcgg ttcccccgcg cgcatcgagc
      601 ccgaccggcc acgcaccgac gccgagctcg cgcgcctgct cgtgcgactc ggccgcgaac
      661 gccagaagcc gagcctcgtg tacctgtggt cgccgccgcc ggatcccgaa acgcgtcccg
      721 cgctcgagcg cgcgctcgtc acgctgccgc gccgccgctt cgggctcaat tggatgagtg
      781 tgccgctcga cgccggcctc ggcggggacg tgagcggcgt cgcgcgcgtg gtcgcggaaa
      841 cggtgtcgct gcgcgcccaa gccgctatgc gccgcggcga gctcgcgctc aggcggctcg
      901 gggttcgagc ggccccacgc caggcaccgg ggcgtccgtg agaaagccga gcgcgcccgc
      961 cccggccgta gcgagcggcg acaacgcccg cgccgtactc gcgcgccatg gcgtgctacc
     1021 caagcgccat ttcagccaga atttcctgct cgatcgcggc ctctgccggc gcattgccga
     1081 gtatgtcgcg cccgaaggcg cgttcgtcat cgaggtgggc gcggggctcg gcgcgctcac
     1141 cgagccgctc gtggagcgca gccgcgaagt cgtcgccatc gagcgcgatc gcgacctcgt
     1201 gccggcgctc acggcggagc tacggccgag catcgacgcc ggacgcttgc gcatcgtcga
     1261 ggccgacgcg aagagcttcg actacgagag cgagctcgaa cgcgccgcac cgccgcgcgc
     1321 cgtcgtggga aacctgccgt accacctgag cggcgtcttg ctcgaaacct tcgtgcggct
     1381 cgctcctcga ctcgagcgcg ccggagcgct ggtccagctc gaggtggcgg ctcgcctcgt
     1441 ggcgcccgct ggtggcgacg attacggcgc gctcagcgtg ttcacgcagg ccgcctatcg
     1501 cgtcacgcgg ccgctcgtcg tgcgccgcgg cgccttcttc ccacaaccgg gcgtcgactc
     1561 cgccctcgtc gtgttcgagc cgctcccgac gccgctcgcc caagaaacgg tgcgctttcg
     1621 cgagctcgtc aaggcggcct tttcgcagcg cagaaagaag ctcaaaaacg cctggtccgg
     1681 cgtgctcgcg ccgcccgagc tcgcccgcgc cgccgaacgt gccggcatcg atctcgaccg
     1741 gcgcggcgaa acgctcagcg tcgcggagtt cgcgcgcatg acggcggagg cagacgcccg
     1801 gtgacactgc tctgccgtcg cacgttcgtc gtcacgctcg cgctcacggc ggcgttcggc
     1861 tgccggcggg ccgcggacgc gccgccggtg cacgcccggt tcggtgtctt cttcggcgga
     1921 cagctgcagg aacgcgagga gatcccactc gtcttcgatc gcgcgcgcca gagcatgggc
     1981 gtgcgcttcg aattttcgac gccgcccgcg agcgaggggc gcgtcacttg ggagctcgag
     2041 aagccgcgcg cgggcaaagg caaaaatctc ggcaacgtcg tggagtacgg cgaagcgcgc
     2101 acgcgcccgg gcgagccggt gctcgatatt cccctcgcct ttcgcgaggg cgaccgcgcg
     2161 ggcgcctggc gcattcgcgt cgccctcgac ggcaagaacg tgctcgaccg cccgttcaag
     2221 gtcgtgccgg caacggactc gccagcggac gactgagcgc gctcgggaag gacaagccgg
     2281 atcgaagatc cgggttgcgg gactaaacgc cttcgctcgg agcgccgtcg gggtgcgcgc
     2341 gatactgctc gacctgcgtg agggcgatct cgttctgact gcgcacgcgc gccggcggcg
     2401 gatcgccgta gagttcgagc tgggtcgcgg cccagagctc gcgcgcgacg agcgcgccgt
     2461 actcggggcc gttcggatcg cccgcgtagc ggtcgagcgc ttcgtccact tctttgagct
     2521 cgagccgcac tttgacgggg tcgatctccg tcttcgtcgt gaaatgcgcg gtcaggacga
     2581 cggcgcgatc gtcggccacc tcggcgaagc ccgcgccgat ggcgaccgtt tccagcacgc
     2641 ccgagtgcgt gaacgtgacg atgccggccg tgagcgccgc gagcatcggt tgatgccgcg
     2701 gcatcacgcc gaattccccg tccacgccgg gcgccgtgaa gatctccacc gcttgggcga
     2761 gcttgacgcc ctcgggcgtg acgatctcga ggtcgagtgt ttcagccatc cggatggcct
     2821 tacgcggctg ccttgagctt ggccgcggcg gccttcacgt cgtcgatgtt gccttggagg
     2881 tagaacgcct gctccggaag atcgtcgagc gcgcccgaga ggatctcctg gaacccggcg
     2941 atcgtctcct tgagcggcac gtagcggccc gggcggcccg tgaaggtcgc ggccacgaag
     3001 aacggctgcg acaggaagcg ctcgattttg cgcgcgcgcg acacggtgag cttgtcgtct
     3061 tcgctgagct cgtcgaggcc gaggatggcg atgatgtcct gcaaatcctt gtagcgctgc
     3121 agcgtctgct gcacctggcg cgccaccttg tagtgctcgt cgccgacgat ggcgggcgag
     3181 agcatcgtgc tcgtcgagtc gagcggatcg acggccgggt agatgccctt ctcggaaatc
     3241 gcgcgcgaga gcacggtcgt ggcgtcgaga tgcgcgaacg tcgtggcggg cgccgggtcg
     3301 gtgagatcgt cggtcagcgg cactacgact gcgcccgccg ggtgcaggag gtgctccagc
     3361 gctacaagga gctccaggac atcatcgcca tcctcggcct cgacgagctg tcggaagagg
     3421 acaaggtcat cgtgtcccgc gcccgcaagg tgcagaagtt cctggcgcag ccgatgttcg
     3481 tcgccgaggt gttcaccggc ctgcccggca tcttcacccc ggtggaggag acgatcgaga
     3541 gcttcgagat gctcctcc
//
LOCUS       DATIML010000669         2217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3311004, whole genome shotgun sequence.
ACCESSION   DATIML010000669 DATIML010000000
VERSION     DATIML010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3311004"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VLJ38_11505"
     CDS             complement(<1..364)
                     /locus_tag="VLJ38_11505"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HSU40193.1"
                     /translation="MTSATDVTGESPHPLASSSVLDTEGRAVTLGELFGARPLVVVFL
                     RHFGCLFAKQQIAELVRRYDELGAAGAAVAVIGNGSVEEARAFASEHALPFALFTDPT
                     RESYCAVGLRHGLGTTLTP"
     gene            complement(361..1833)
                     /locus_tag="VLJ38_11510"
     CDS             complement(361..1833)
                     /locus_tag="VLJ38_11510"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HSU40194.1"
                     /translation="MRVFITGATGFLGRALTLRLRRDGHDVSAWVRSPAKAKALLGAE
                     IELIDARGGDARLRVALAASDAVIHLAGEPVLPRRWSKGRRKVLFDSRVGLTDQIVQA
                     LAELSVRPQVLVSGSAVGFYGDGQAMPLPEAAAKGQGFLAHLCAAWESAAQKASQLGL
                     RVVTLRTGVVLGRDGGAVARLVPLQRAGLGVLGRGEQWLPWIHLHDWVELVVTALRDA
                     RYSGALNATAPRPVTQGEFARELGRVLGNVTPRRVPAVALRLALGAAAEVLLASQRAV
                     PKRAEQLGFHWSFPELPGALTDLLEARGVTTEALGPGPLAVTEPTPYLVGRPPRYLLR
                     SSVELTAPIEEVFGFFSLPENLGPMTPANLEFRMLEPVESVGAGARIDYRIRLGALPL
                     RWRTTIERFRPPHLFIDSQARGPYRAWWHEHRFRAEGGHTIMEDRVYYALPFGWLGRL
                     VHRWFVVGALRRIFGFRSDAVRLRFGVAAAPLAPGKRGAA"
     gene            1904..>2217
                     /locus_tag="VLJ38_11515"
     CDS             1904..>2217
                     /locus_tag="VLJ38_11515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40195.1"
                     /translation="MNVGIELAERGLIPDPFLRVGIRRLLRRRRAEEAARAEHPEAIE
                     RWLAEMAASPIALETQAANRQHYEVPSAFFEAVLGPQLKYSACFFEPGVSSLPAAEER
                     MLA"
BASE COUNT          388 a          770 c          769 g          290 t
ORIGIN      
        1 cgggcgtgag cgtcgtaccg agcccgtgcc tgagcccgac ggcacagtag ctctctctcg
       61 tggggtcggt aaaaagcgcg aacggcagcg cgtgctcgct cgcgaacgcc cgcgcctcct
      121 cgaccgagcc gttcccgatg acggcgacgg cggcacccgc agcgccgagc tcgtcgtagc
      181 gtcgcacgag ctcggcgatt tgctgtttgg cgaacagaca accgaagtgc cgcagaaaca
      241 ccacgacgag cggacgcgca ccgaagagct caccgagcgt gacggcgcga ccctcggtgt
      301 cgagcacgct gctcgacgcg agcggatgcg gcgactcccc ggttacgtca gtcgcgctgg
      361 tcacgccgca cctcgcttgc cgggagcgag cggcgccgcg gccacgccga aacgcaagcg
      421 cacggcgtcg ctgcgaaagc cgaagatgcg ccgcagcgcg cccacgacga accagcggtg
      481 gacgagacgc ccgagccaac cgaagggcag cgcgtagtac acgcggtcct ccatgatcgt
      541 gtgaccgccc tcggcgcgaa accgatgctc gtgccaccac gcgcggtacg gaccacgcgc
      601 ctgcgagtcg atgaagaggt gcggtgggcg gaagcgttcg atcgtcgtgc gccagcgcag
      661 aggcaacgca cccaaccgaa tccggtaatc gatgcgcgcg cccgcgccga cgctttcgac
      721 cggctcgagc atccgaaact cgaggtttgc cggcgtcatg gggccgaggt tctcgggcag
      781 ggaaaagaag ccgaagacct cttcgatggg cgccgtgagc tccacgctgg accgcagcaa
      841 gtaccgcggc ggccggccga cgaggtacgg cgtcggctcc gtgacggcga gtggacccgg
      901 cccgagcgct tcagtcgtga cgccccgggc ctcgagcaag tcggtgagcg cgcccggcag
      961 ctccggaaac gaccagtgaa acccaagctg ctcagcgcgt ttcggcacgg cgcgctggct
     1021 cgcgagcaag acctccgcgg ccgcgccgag tgcgaggcga agggcgaccg cgggcacgcg
     1081 acgcggcgtc acgttaccga gcacgcgacc gagctcgcgc gcgaactcgc cctgtgtcac
     1141 ggggcgcggc gccgtggcgt tcagcgcgcc gctgtagcga gcgtcgcgca aggccgtcac
     1201 gacgagctcg acccagtcgt gcaggtgaat ccaaggcagc cactgctcgc cgcgcccgag
     1261 cacgccgagg cccgcgcgtt ggagcggcac gagccgagcg accgccccgc catcgcggcc
     1321 cagcacgacg cccgtccgca gcgtgacgac acgtagaccg agctgactcg ccttctgcgc
     1381 cgcggattcc caagcggcgc agaggtgcgc gagaaagccc tgccccttcg ccgcggcctc
     1441 gggcaacggc atcgcttgcc catcaccgta gaacccgaca gcgctgcccg agacgagcac
     1501 ctgtggtcgc acggagagct cggcgagggc ttggacgatt tggtcggtta agccgacgcg
     1561 gctatcgaac aggacctttc ggcgcccttt ggaccaacgc cgcggcaaca ctggctcgcc
     1621 ggcaagatgg atgaccgcat cgcttgccgc gagcgcgacg cgcagtcgcg cgtcgccgcc
     1681 gcgagcgtcg atgagctcga tttctgcgcc caaaagggcc ttcgccttgg cgggcgaacg
     1741 cacccaggcg ctgacgtcgt gcccgtctcg ccggagcctc agggtcaagg cgcggccgag
     1801 gaaacccgtg gcacccgtga tgaagactcg cattgggctg atctagacga tttggacgac
     1861 tagtcaattg acaagtcgtc caagtcgtcc aagatggggt gacatgaacg tcggcatcga
     1921 gctggccgaa cgaggcctga ttcctgaccc cttcctgcgc gtagggattc gccggctgct
     1981 gcgccgtcgc agggcggagg aggcggcgcg tgccgagcac cccgaggcca tcgagcggtg
     2041 gctcgcagag atggcggctt cgcccatcgc gctcgagacg caggctgcga accgacagca
     2101 ctacgaagtg ccgagcgcgt tcttcgaggc cgtgctcggg ccgcagctca agtacagcgc
     2161 gtgcttcttc gagccggggg tgagctcact gccggcagcc gaggagcgca tgctcgc
//
LOCUS       DATIML010000670         3780 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2155885, whole genome shotgun sequence.
ACCESSION   DATIML010000670 DATIML010000000
VERSION     DATIML010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3780
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2155885"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..698)
                     /locus_tag="VLJ38_11520"
     CDS             complement(<1..698)
                     /locus_tag="VLJ38_11520"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40196.1"
                     /translation="MTKSSSLSPVSEPQPLTLPFAPGDIIADKYEVVGVLGSGGVAYV
                     ISALHLELGEMVALKFLRPESLAHEDVVARFASEARAVARIKSEHVAHVFDVGTLPDG
                     APFIVMEYLEGKDLADVLAERRKLPVKVAVDYVLQACEALACAHAAGIVHRDIKPENL
                     FLTQQAGSVERVKVLDFGISKSAMAGLEQPNGKRFAHTMLPMGTPGYMSPEQIRAPKD
                     VDSATDVWALGVML"
     gene            complement(784..2355)
                     /locus_tag="VLJ38_11525"
     CDS             complement(784..2355)
                     /locus_tag="VLJ38_11525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40197.1"
                     /translation="MARHRTPHLYAPLALLCGLGGAACNSITKLDSYTVGPDTQASDH
                     AAACVSNAECTDDATSAAGSSDPVPAVCVKSTGHCVKLLSDDCTTITGDYTSDDAIVI
                     GSLFSTVGAQAATNIQRQQSAMLAVTQINDVGGVPSNSGVPHKLVLVSCDESTNLARA
                     GGHLVDELKVPAIVGPNTSQDTLDLSMQVSVPGDTVVMSPTAVASSVAALSDDDLTWL
                     MVPTDVQRAPLMISQINVLEQQLEAARGTTSVKLGVVYRNDALGIGTRTSLNALTLNG
                     KPIADAVNLGNKVHINAYNFSDADQDPIVQEYLTFLPDIIVLAGTAEAISKVMVPLES
                     AWPASTPRPQYVLIDSVKVPELITAATGNDDLRSRVRGTGVTPSATSAVVYNAFKVDY
                     QIAYPNSSMVSGMGPAYDATYAIAFALAAKKDEPVSGDAVKAGLRMLTGGDTMEIGAT
                     KVLPAFQKLAAGQAINALGTYSSLSWSKDGAVVGGTLEMWCIGAPGGKPAFQSSGLTF
                     DIMTAKQAGTYTACN"
     gene            2534..3613
                     /locus_tag="VLJ38_11530"
     CDS             2534..3613
                     /locus_tag="VLJ38_11530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40198.1"
                     /translation="MHAHQPTSSFRSPLLPALVACMGLFAPAVAHAQDDAAETAAART
                     LAVDGVKLAQAEQCGDAIDKLDRAEKLKHSPIVLRYLGECQIKVGRWVEGSESLRKLL
                     REPLPEGATPALEQAYDSATATLRDLKPRIPSMKITVNAPHEAELKLKVDGKDTPSSV
                     IGVALPADPGDHTIEVTAAGFLKASSQLRLAPSGTATVALELRRDPSAPVAAKAAVVA
                     ASPAAAPLPAAPPEETAPPPHGSRTGRALAYVSYGVAAVGLGVGIAFGTSASHDEQAL
                     RTTCPNHVCPPDQQGALDFAKTKGTISTIGFAVAGGSAALGTILLFTSADPSPKKNAA
                     LPKRTASFKPHAAIGFGNVTVGADF"
BASE COUNT          611 a         1297 c         1241 g          631 t
ORIGIN      
        1 tagagcatca cgccgagcgc ccacacgtcg gtcgcggagt cgacgtcctt cggcgcgcgg
       61 atctgctcgg gcgacatgta gcccggcgtg cccatgggca gcatcgtgtg cgcgaagcgc
      121 ttgccgttcg gttgttcgag gccggccatc gcgctcttgg agatgccgaa gtcgagcact
      181 ttgacgcgct cgacgctgcc ggcctgctgc gtcaaaaata gattttctgg cttgatgtcg
      241 cggtgcacga tgcccgcggc gtgggcgcac gcgagcgcct cgcaagcctg aagcacgtaa
      301 tcgacggcca ccttgacggg cagcttgcgg cgttcggcga ggacgtcggc gagatccttg
      361 ccctcgaggt actccatcac gatgaacggt gcgccgtccg gcagcgtgcc gacgtcgaag
      421 acgtgcgcca cgtgctcgct cttgatgcga gcgaccgcgc gcgcctcgct cgcgaaacgc
      481 gcgaccacgt cttcgtgcgc gagcgattcg ggacgcagga atttgagcgc caccatttcc
      541 ccgagctcga ggtgcagcgc cgagatcacg taagcgacac cccccgaccc gagcaccccg
      601 acgacctcgt acttgtcggc gatgatgtcg cccggagcga aaggcaaggt gagcggttgg
      661 ggctccgaaa ccggcgacag gctcgagctc ttcgtcacga gcgatcgcgg ccgcgtgggt
      721 tctgactcga ccttcctcgg tgtactgctc atgaactcct ctgtcttcaa atccgtctcg
      781 cggtcagttg caggcggtgt aggtgcccgc ttgcttggcc gtcatgatgt cgaaagtgag
      841 gcccgagctc tggaacgccg gcttgcctcc gggcgcgccg atgcaccaca tctcgagcgt
      901 gccgccgacc acggcgccgt ccttgctcca gctgagcgaa gaatacgtcc cgagcgcgtt
      961 gatggcctgc cccgcggcga gcttttggaa cgccggcagc accttggtcg cgccgatttc
     1021 catggtgtcg ccgcccgtca gcatgcgcag gcccgctttg acagcatcgc cgctcacggg
     1081 ctcgtccttc ttggccgcga gcgcgaacgc aatcgcgtac gtggcgtcgt acgccggacc
     1141 catgcccgag accatcgagc tgttcgggta ggcgatttgg tagtcgacct tgaaagcgtt
     1201 gtagacgacg gccgatgtgg ccgacggcgt cacgcccgtg ccacgcacgc gcgagcggag
     1261 gtcgtcgttg cccgtcgcag ccgtgatgag ctcggggacc ttcaccgaat cgatcaggac
     1321 gtattgcgga cgcggcgtgc tggcgggcca ggcgctttcg agcggcacca tcaccttgct
     1381 gatggcttcg gccgtgccgg cgagcacgat gatgtcgggc aggaacgtga ggtactcctg
     1441 cacgatcgga tcctggtcgg cgtccgagaa gttgtaggcg ttgatgtgca ccttgttgcc
     1501 gaggttcacc gcgtcggcga tgggcttacc gttgagcgtg agggcgttca gcgacgtgcg
     1561 cgtgccgatg ccgagcgcgt cgttgcggta gacgaccccg agcttgacgc tcgtcgtccc
     1621 gcgagcggcc tcgagctgct gctcgagcac gttgatctga ctgatcatga gcggggcgcg
     1681 ctgcacgtcg gtcggtacca tcagccaggt gagatcgtcg tcgctcaacg cggcgacgct
     1741 cgaagccacc gccgtcggcg acatcacgac ggtgtcaccg ggcaccgaca cctgcatcga
     1801 cagatcgagc gtgtcctggc tggtgttcgg gcccacgatg gccggcactt tgagctcgtc
     1861 taccaggtgg ccgcccgcgc gagcgaggtt cgtcgattcg tcgcaggaga cgagcacgag
     1921 cttgtgcggc acgcccgagt tggagggcac gccgcccacg tcgttgatct gcgtcacggc
     1981 gagcatggcg ctctgttgcc gctggatgtt cgtcgcggcc tgcgcgccca ccgtcgagaa
     2041 cagcgagccg atgacgatgg cgtcgtcgct cgtgtaatca cccgtgatgg tggtgcagtc
     2101 gtcgctcaag agcttcacgc aatgacccgt actcttcacg cacacggcgg ggaccggatc
     2161 gctcgatccg gctgcgctcg tcgcgtcgtc ggtgcactct gcattcgaga cgcacgccgc
     2221 tgcatgatcc gaagcttgag tatccggacc aacggtgtag ctgtcgagct tcgtgatcga
     2281 attacacgca gcgccgccga ggccgcacag gagcgccaaa ggtgcgtaga ggtggggggt
     2341 tcggtgtcgg gccatcgtga tcctccgtat tccttctgcc tgagtgcgtg gtcccaccaa
     2401 acggccgctt gggtcgccgc aaaagcctcc ctcgtccaaa aaagagacga gccccaaact
     2461 gccgctctta atcggctagt gcgtcggtcg ttgttgccgg ggcaccgttt ttactcgaac
     2521 gcgaaggact cccatgcacg cacaccagcc cacctcgtct tttcgctcac ctctccttcc
     2581 ggcactcgtc gcctgcatgg ggctgttcgc gcccgccgtc gcacacgcac aagacgacgc
     2641 cgccgagacc gcagccgcgc gcaccctcgc ggtcgacggc gtgaagctcg cgcaagccga
     2701 gcaatgtggc gacgcgatcg acaagctcga ccgcgccgaa aagctcaagc actcgccgat
     2761 cgtgctccgc tatctcggcg agtgtcagat caaagtgggc cgctgggtag aaggcagcga
     2821 gtcgctgcgc aagctcctgc gcgagcccct gcctgaaggt gcgacgcccg cgctcgagca
     2881 agcttacgac agcgcgacgg cgacgctccg cgacctgaag ccgcgcatcc cgagcatgaa
     2941 gatcaccgtg aacgcgccgc acgaggccga gctcaagctc aaggtcgacg gcaaggacac
     3001 gccgtcgtcc gtcatcggcg tcgcgctgcc cgccgacccc ggtgaccaca ccatcgaagt
     3061 cacggcagcc ggcttcttga aagcgagctc gcagctcagg ctcgcgccga gcggcacggc
     3121 cacggtggcg ctcgagctaa ggcgcgaccc gtccgcaccc gttgccgcca aagccgccgt
     3181 cgtcgcggcc tcgcccgccg cggcgcccct gcccgccgcg ccgcccgaag agacggcgcc
     3241 gccgccgcac ggttcgcgca cgggccgcgc cctcgcctac gtctcgtacg gcgtcgccgc
     3301 cgtcggtctc ggcgtcggca tcgccttcgg cacctcggcg agccacgacg aacaggcgct
     3361 gcgcaccacc tgcccgaacc acgtctgccc gcccgatcaa caaggcgcgc tcgacttcgc
     3421 caagaccaag ggcaccatct cgacgatcgg cttcgccgtc gcgggcggca gcgccgcgct
     3481 cggaacgatc ttgctcttca cttcggccga cccgagtccg aagaagaacg ccgcgctgcc
     3541 caagcgcacg gcgagcttca agccgcacgc cgcgatcggc ttcggcaacg tgaccgtcgg
     3601 cgcggacttc tgagcccggt cgcggtcagc tcggcgcggc acgcagccgg gcggcgatgg
     3661 tttcgaccag cgcgcgccga tcggccgcga acagctgcgt gtggtcgaaa cgcgggaagt
     3721 agtcgagcgt gacccggtcc cggaaatcga gctccggaaa ggcggcgcgg agctggctcg
//
LOCUS       DATIML010000671         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_136039, whole genome shotgun sequence.
ACCESSION   DATIML010000671 DATIML010000000
VERSION     DATIML010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136039"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1201)
                     /locus_tag="VLJ38_11535"
     CDS             complement(230..1201)
                     /locus_tag="VLJ38_11535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40199.1"
                     /translation="MTQTATLLLLLAGAPTPGERQLLADFARQNHLAFIAPAPTPDSS
                     SLGYPSELVLDIEGRLDEARTLASSLDEEHALALLDTVERDLSKHPELPQAAWLLAEH
                     HRIEADVRRDEPDSSARVKELTLAADVLEGPRALAFGAANDAPSAPPAPKNVAVRDLT
                     ARDSLEIDGQGGGAERLVLPGVHQVRVLRERELVFAAWQRLGTEPNVTLGVRPIAPCS
                     EEDLSVEASGLTPHTHAPVACPEWFVARRVPQGLELSRCRASACGAFVPLAASAPEAK
                     PFPAWATATLVGAGAVAAGFLAVWAAGGFEHEPAAPPKTVFVYGGLH"
     gene            1235..>1704
                     /locus_tag="VLJ38_11540"
     CDS             1235..>1704
                     /locus_tag="VLJ38_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HSU40200.1"
                     /translation="MQLDFVNRELTIKLVYYGPALSGKTTNLQALHRVAAPGSSGRLM
                     TLETKDDRTLFFDLLPLSFRAQSGLAVRLKVFTVPGQVIHASTRRLVLQGADGVAFIA
                     DSRVSETQANTDSFMDLKDNLREHGLSLRQMPLVIQFNKRDLPNIRSDEEIAKLG"
BASE COUNT          266 a          567 c          607 g          264 t
ORIGIN      
        1 ctggcgacgg acgagcgccg gtccgcgctc gatattgcgc tcgccgtcga gcggcgaacg
       61 gtgcttggcg gtccggcgaa atcgacggtg ctcgccgcca tcgccgacgc gcggacgcgc
      121 tggctcgccg tgagcgccgc ccggcgttga gacgcggagc cgagccggcg aacggaacgg
      181 cgcccgcgaa cggagcgcga cggaaccaaa cggcccgcgt gtgcggattt cagtgcagtc
      241 cgccgtagac gaacacggtc ttcggcggcg ctgccggttc gtgctcgaag ccgcccgctg
      301 cccaaacggc caagaagccc gcggcgaccg cgccggcgcc gacgagcgtc gccgtcgccc
      361 acgctggaaa cggcttcgcc tcgggcgctg acgcggcgag cgggacgaac gcgccgcaag
      421 cgctcgcccg acagcgcgag agctcgagac cttgcggcac gcgtcgcgcc acgaaccact
      481 cggggcacgc gacgggcgcg tgagtgtgcg gcgtaaggcc gctcgcttcg acgctcaggt
      541 cctcctcgct gcacggcgcg atggggcgga caccgagcgt gacgttcggc tccgtgccga
      601 gccgctgcca agcagcgaac acgagctcgc gctcgcggag aacgcgcacc tgatgcacgc
      661 cgggcaggac gagccgctcg gcgccgccgc cctgtccgtc gatttctagg ctgtcgcgtg
      721 cggtgagatc gcgcacggcc acgttcttgg gtgcgggggg agcgctcggc gcgtcattcg
      781 ccgctccgaa cgcgagcgcg cgcgggcctt cgagtacgtc ggccgcgagc gtaagctcct
      841 tcactcgcgc gctcgaatct ggctcgtctc ggcgcacatc ggcttcgatg cgatgatgct
      901 cggcgagcag ccacgccgct tgcggtagct cggggtgctt cgagagatcg cgctcgacgg
      961 tgtcgagcag cgcgagcgcg tgctcctcgt cgagtgagga cgcgagcgtg cgcgcctcgt
     1021 cgagtcggcc ctcgatgtcg agcacgagct cgctcgggta gccgagcgag gacgagtccg
     1081 gtgtaggcgc gggtgcgatg aacgcgaggt gattttgtcg tgcgaagtcc gcgaggagct
     1141 ggcgttcgcc gggcgtggga gcgcccgcga gcagcaagag cagcgtcgcg gtttgggtca
     1201 tcctaggccc gtggtaggct gcctgtaggt cactgtgcag ctcgatttcg tcaatcgtga
     1261 gctaacgatc aagctcgttt actacgggcc tgccctcagt gggaagacga cgaatctgca
     1321 ggccctgcat cgcgtggctg cgccgggttc gagcggacgg ctcatgacgc tcgaaaccaa
     1381 ggacgatcgt acgctgttct tcgatctgct cccgctctcg ttccgcgcgc agagcgggct
     1441 tgccgtgcga ctcaaggtgt tcacggtgcc cggccaggtg attcacgctt cgacgcgccg
     1501 gctcgtgctc cagggggccg acggcgtcgc gttcatcgcc gactcgcgcg tgagcgagac
     1561 acaggcgaac accgactcct tcatggactt gaaggacaac ctgcgcgagc acgggctttc
     1621 gctgcggcaa atgccgctcg tgatccaatt caacaagcgc gatttaccga acatccgcag
     1681 cgacgaagaa atcgcgaagc tcgg
//
LOCUS       DATIML010000672         3231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1294820, whole genome shotgun sequence.
ACCESSION   DATIML010000672 DATIML010000000
VERSION     DATIML010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3231
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1294820"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2049)
                     /locus_tag="VLJ38_11545"
     CDS             complement(<1..2049)
                     /locus_tag="VLJ38_11545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSU40201.1"
                     /translation="MKAPRELVADALGLLHQKEGPLTAELLRKPAGFGIGQVPLAKQP
                     DATTTAVCGFCSTGCGLELHLKDGEAIGLTPARDYSVNFGMACPKGWEALTPLKAKDR
                     ATVPLIRNERGALVPVAWDRALEAFVRRFKAIQEKHGKESVAWLGTGQIPTEELAMLG
                     AFAKFGMGVVHGDGNTRQCMATAAVAYKQAFGFDAPPYTYEDFEQSDVIVLVGSNLCI
                     AHPILWEHVCRNPHQPEIVVVDPRRTETAMNATLHLQLAPKSDLTLFYAVTSHIISRG
                     WLDREFIDAHTSGFDELARHVAPFTLARAAEATGLAPDAIARLAQLIGTGKRVSIWWT
                     MGVNQSYEGVRLAQALMNLALITGNIGRPGTGANSITGQCNAMGSRLFSNTTNLLGGR
                     DFTNPEHRATVARILGIPNERIPDRPSLAYDQILEGVLAGKIKGLWIVATNTAHSWIN
                     QNDAVDILKRLDFLVVQDMYTTTETARVAHLVLPAAGWGEKEGTFINSERRVGLLKKV
                     ARAPGEALADFSIFKLLAEAWGVGELFRRWTDPEAVFQIMKELSRGQPCDMTGIEDYA
                     MLDDRRGIQWPLRAGENVLPQSQRRLFADGRFFHADGKARLLFDAPRPVPEATTPEYP
                     FVLLTGRGSSSQWHTGTRTEKSAVLRRLYPNEPYVELSPSAADRLSIQPGSWVIVESR
                     R"
     gene            complement(2046..>3231)
                     /locus_tag="VLJ38_11550"
     CDS             complement(2046..>3231)
                     /locus_tag="VLJ38_11550"
                     /EC_number="1.8.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF016838.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0019645 - anaerobic electron transport
                     chain [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DmsC/YnfH family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HSU40202.1"
                     /translation="GIVRKCDMCSDRLAEGEPPACVQACPNEAISIRIVDTARALEDA
                     QSEAFLPGAPSPTITVPTTTYKSTRPLPRNVLPADFHRVRSSHRHLPLVFLLVLTQLS
                     VGAFVADFVLGRLGGYATLGVARPYQSLLALAMGLLALGASVFHLGRPQYAFRAILGI
                     RTSWMSRECAAFGLFAGSAVLYASLFWVEPLSGRFGLPPPPAFLLAEGRSVLGFVVAA
                     SGVVGVLCSMKLYQVTARRWWSAARTSGRFFLTAAVLGVATTSVALTLASLFEGRDSA
                     ARATAFGLFLPLAALAAIKLAFDAEILLHLKDRGLGELRRTALLLIGELRPYAFARFV
                     LGALAAALLVAVARTPDIALETQLGLAVTAWALLLGAEICERMLFFSAQSAPKMPGAI
                     GP"
BASE COUNT          553 a         1058 c         1120 g          500 t
ORIGIN      
        1 gcgccgcgat tcgacgatga cccagctgcc cggctggatc gagagtcggt cggcggcgct
       61 cgggctgagc tcgacgtacg gctcgttcgg gtagagccgc cggagcacgg ccgatttttc
      121 ggtgcgcgtc cccgtgtgcc actggctcga ggagccgcga cccgtgagca acacgaacgg
      181 gtactcgggc gtggtcgctt ccggcacggg ccgcggcgcg tcgaacagga gccgcgcctt
      241 gccgtcggcg tggaagaaac gaccgtcagc gaacagccga cgctggctct gcggcagcac
      301 gttctcaccg gcgcggagcg gccactgaat gccgcgccga tcgtcgagca tcgcgtagtc
      361 ctcgatgccg gtcatgtcgc acggctgccc gcgcgaaagc tccttcatga tttgaaacac
      421 cgcttccgga tccgtccagc gccggaacag ctcgcccacg ccccaggctt ccgcgagcag
      481 cttgaaaatc gaaaagtcgg cgagcgcttc ccccggcgcg cgcgcgacct ttttcagaag
      541 tccgacgcgg cgctcggaat tgatgaaggt gccttctttt tcgccccaac cggccgcggg
      601 cagcaccaaa tgcgcaacgc gtgcggtctc ggtcgtcgtg tacatgtctt ggaccaccaa
      661 aaaatccaag cgcttcagga tgtcgacggc gtcgttctga ttgatccagg agtgggccgt
      721 gttcgtggcg acgatccaga gccctttgat tttgccggcg agcacgccct cgaggatttg
      781 gtcgtacgcg aggctcgggc gatcggggat gcgttcgttc gggatgccga gaattcgtgc
      841 gacggtggcg cggtgctcgg gattggtgaa gtcgcgcccg ccgaggaggt tcgtcgtgtt
      901 gctgaacagg cgcgacccca tcgcgttgca ctggccggtg attgagttcg ctccggtgcc
      961 gggacgaccg atgttgcccg tgatgagcgc gaggttcatc aaggcttgag cgagccgcac
     1021 gccttcgtag ctctggttga cgcccatggt ccaccagatg ctcacgcgct tgcccgtgcc
     1081 gatgagctga gcgagacgag cgatggcgtc cggcgcgagg cccgttgcct cggcggcgcg
     1141 ggcgagcgtg aacggcgcga cgtgccgcgc gagctcgtcg aaacccgacg tgtgagcgtc
     1201 gatgaactcg cgatcgagcc aaccgcgcga gatgatgtgc gaagtgacgg cgtaaaaaag
     1261 cgttaagtcg gatttgggcg cgagttgcag gtgcagggtc gcgttcatcg ccgtctccgt
     1321 gcggcgcgga tcgacgacca cgatttccgg ctgatgcggg tttcggcaca cgtgctccca
     1381 caggatcggg tgcgcgatgc agaggttcga gcctacgagc acgatcacgt cggactgctc
     1441 gaaatcctcg taagtgtacg gcggcgcgtc gaagccgaag gcctgcttgt acgcgacggc
     1501 ggccgtggcc atgcactggc gcgtgttgcc gtcgccgtgc acgacaccca tgccgaactt
     1561 cgcgaaggcg ccgagcatgg caagctcctc ggtggggatt tgccccgtgc cgagccaagc
     1621 gacggattcc ttgccgtgct tctcttggat ggccttgaac ctgcgcacga aggcttcgag
     1681 cgcgcgatcc caggccacgg gcacgagcgc gccgcgttcg ttgcggatga gcggcacggt
     1741 cgcgcgatct ttggccttga gcggcgtcag cgcttcccac cccttcgggc acgccatgcc
     1801 gaagttcacg gaatagtcgc gcgcgggcgt gagcccaatg gcctcgccgt ccttgagatg
     1861 cagctcgagg ccgcagcccg tcgaacagaa gccgcacacg gccgtggtcg tcgcgtcggg
     1921 ctgcttcgcg aggggtacct ggccgatgcc gaagccggcc ggtttgcgca aaagctccgc
     1981 cgtgagcggc ccttcttttt ggtgcaacag gccgagggcg tcggccacga gctcgcgagg
     2041 tgctttcacg gtccgatggc tcccggcatt ttgggtgcgc tctgggcgct gaagaacagc
     2101 atgcgctcgc agatttcagc gccgagcaag agcgcccacg ccgtcacggc gagtcctagc
     2161 tgcgtctcga gcgcgatgtc cggcgtgcgc gcgaccgcga cgagcaatgc cgctgcgagc
     2221 gccccgagca cgaagcgcgc gaacgcatac gggcggagct cgccgatcag caagagcgcc
     2281 gtgcgcctga gctcgccgag gccgcgatcc ttcaagtgca ggaggatctc ggcgtcgaag
     2341 gcgagcttga tggcggcaag cgccgccagg ggcaagaaca agccgaacgc ggtcgcgcgc
     2401 gccgccgagt cgcggccctc gaagagcgag gcgagcgtga gggcgacgct cgtcgtggcg
     2461 acgccgagca cggcggccgt caaaaagaag cgaccgctcg tgcgcgccgc gctccaccag
     2521 cgccgcgccg taacttggta aagcttcatc gagcagagca cgccgacgac gccgctcgcc
     2581 gcgacgacga agccgagcac cgagcgcccc tctgcgagca agaacgcggg cggcggcggc
     2641 aagccgaagc ggccgctcag cggctccacc caaaatagcg acgcgtagag cacggcggag
     2701 cccgcgaaca agccgaacgc ggcgcactcc cggctcatcc acgaggtgcg gatcccgagg
     2761 atcgcgcgga acgcgtactg tggcctaccg aggtggaaca cgctcgcgcc gagcgcgagc
     2821 agccccatag cgagcgcaag cagcgattgg tacggccgcg cgacaccgag cgtcgcgtat
     2881 ccgccgagcc ggccgagcac gaaatcggcg acgaacgcgc ccacggacag ctgcgtgagc
     2941 acgagcaaga acacgagcgg caagtgccgg tgcgagcttc tgacccggtg aaagtccgcg
     3001 ggcagcacgt tacgcggcag gggccgcgtg ctcttgtacg tcgtcgtggg caccgtgatc
     3061 gtcggcgaag gcgcgccggg caaaaaagcc tcgctctgcg cgtcttcgag cgcgcgcgcc
     3121 gtgtcgacga tgcgaatcga aatcgcttcg ttcgggcacg cctgcacgca cgccggcggc
     3181 tcgccctccg ccaagcgatc actgcacatg tcgcacttgc gcacgatccc g
//
LOCUS       DATIML010000673         1950 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4759951, whole genome shotgun sequence.
ACCESSION   DATIML010000673 DATIML010000000
VERSION     DATIML010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4759951"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VLJ38_11555"
     CDS             <1..200
                     /locus_tag="VLJ38_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU40203.1"
                     /translation="MLCLWASLAFGGAAALGPALQSVGVTSGYHLFNAAPYILTLAIM
                     IITCSPKRTLTGAPAELSITR"
     gene            208..891
                     /locus_tag="VLJ38_11560"
     CDS             208..891
                     /locus_tag="VLJ38_11560"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HSU40204.1"
                     /translation="MSERYIKSEPYAWPYNGDLRPENTALIIIDMQTDFCGVGGYVDK
                     MGYDLSLTRAPIEPIKRLLSAMRAKGYHIIHTREGHRPDLADLPANKRWRSRQIGAGI
                     GDPGPCGRILVRGEPGWDIIPDLYPKAGEPIIDKPGKGSFCATDLDMLLRQTGVRNLI
                     LTGITTDVCVHTTMREGNDRGYECLILGDCCAATDAGNHAAALKMVTMQNGVFGAVST
                     SNALLEVWT"
     gene            888..>1950
                     /locus_tag="VLJ38_11565"
     CDS             888..>1950
                     /locus_tag="VLJ38_11565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU40205.1"
                     /translation="MSAAAVPGREPTLGVDVSGIGAKGPPRVEARAMTKQFGGNVVLD
                     NVSLSLEPGTVHALLGENGAGKSTLVKCLMGFYQADAGELLVSGEVVAVKSPRDAQAH
                     GIGMVYQHFTLVENMTVAENLLIARQTLPAIIDWKREIAELTAFMQRMPFHIEPTRLV
                     RQLAAGEKQKLEILKQLYLGSRVIILDEPTSVLTPDEADEVLGLVRQMAGRGELSVLI
                     ITHKFREVLAFADHVTILRRGKLVATDRVANLTPAQMAELMVGAEPPKQSSSRTDAAP
                     REIALELELVEADDDIGLPVLEGVSLNVRAGEIVGIAGVSGNGQAELVEILAGQRPLR
                     SGTVRVAGDHYRSTREHIRT"
BASE COUNT          346 a          675 c          624 g          305 t
ORIGIN      
        1 cgatgctgtg cctgtgggcc tcgcttgctt tcggtggtgc ggcagcactg gggcccgcgc
       61 tgcaatcggt cggcgtgacc tcgggctatc acctcttcaa cgccgcgccg tatatcctga
      121 cgctggcgat catgatcatc acctgctcgc ccaagcgcac gctgaccggc gcgcccgccg
      181 aactctcgat cacccggtaa tccgaccatg tccgagcgtt acatcaagtc cgagccctat
      241 gcgtggccct acaatggcga tctgcggccg gagaataccg ccctgatcat catcgacatg
      301 cagaccgatt tctgcggcgt cggcggctat gtcgacaaga tgggctatga tctctcgctc
      361 acgcgggcgc cgatcgagcc gatcaagcgg ctgctgtcag cgatgcgcgc caagggctac
      421 cacatcatcc acacccgcga aggccatcgc cccgatctcg ccgacctccc cgccaacaag
      481 cgctggcgct cgcggcagat cggcgcgggg atcggcgatc ccggcccctg cgggcgtatc
      541 ctggtgcgcg gcgagcccgg ctgggatatc attcccgatc tctatccgaa ggcgggcgag
      601 cccatcatcg acaagcccgg caaaggctcg ttctgcgcca ccgatctcga catgctgctt
      661 cgccaaacag gcgtgcggaa tttaatcctg acgggcatca cgaccgacgt ctgcgttcac
      721 acgacgatgc gcgagggcaa cgatcgcggc tacgaatgct tgattctcgg cgattgctgc
      781 gcggcgaccg atgcgggcaa ccacgcggcg gcgctcaaaa tggtcaccat gcaaaacggc
      841 gtgttcggtg cggtttcgac ctcgaacgct ttgctcgagg tgtggacgtg agcgccgcgg
      901 cagtgcccgg ccgagagccc acgctcggcg tggacgtgag cggcatcggc gcgaagggtc
      961 cgccgcgcgt cgaggcgcgc gcgatgacca agcaattcgg cggcaacgtc gtgctcgaca
     1021 acgtctcgct cagcctcgaa ccgggcaccg tgcacgccct gctcggcgaa aatggcgcgg
     1081 gcaagagcac gctcgtcaaa tgcctgatgg gcttttacca ggccgacgcc ggcgagctct
     1141 tggtcagcgg cgaggtcgtc gccgtgaaga gcccgcgcga cgcccaggcg cacgggatcg
     1201 gcatggtcta ccagcacttc acgctggtcg agaacatgac cgtcgccgag aacctgctga
     1261 tcgctcggca gacgctgccg gcgatcatcg actggaagcg cgagatcgcc gagctcacgg
     1321 cgttcatgca gcggatgccg tttcacatcg agcccacacg gctcgtgcgc cagctcgcgg
     1381 cgggcgaaaa gcaaaagctc gagattttga agcagctcta cctcggcagc cgcgtcatca
     1441 tcctcgacga gccgacgagc gtgctcacgc ccgacgaagc ggacgaggtg ctcggcctcg
     1501 tgcggcagat ggccgggcgc ggcgagctca gcgtgctcat catcacgcac aagttccgcg
     1561 aggtgctcgc cttcgccgat cacgtgacga tcctgcgccg cggcaagctc gtcgcgaccg
     1621 accgcgtcgc gaacctcacg cccgcgcaga tggccgagct catggtcggc gccgagccgc
     1681 cgaagcagtc gtcctcgcgc acggacgcgg caccgcgcga aatcgcgctc gagctcgagc
     1741 tcgtcgaagc ggacgacgac atcgggctgc ccgtgctcga gggcgtgtcc ctcaacgtac
     1801 gcgcaggtga aatcgtgggc atcgccggcg tgagcggtaa cggacaagcc gagctcgtcg
     1861 aaatcctcgc cggccagcgg ccgctccgga gcggcacggt gcgcgtcgcc ggcgaccatt
     1921 accgctcgac acgcgaacac atccgcaccc
//
LOCUS       DATIML010000674         2515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2444225, whole genome shotgun sequence.
ACCESSION   DATIML010000674 DATIML010000000
VERSION     DATIML010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2515
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2444225"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VLJ38_11570"
     CDS             <1..1035
                     /locus_tag="VLJ38_11570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40206.1"
                     /translation="VARHETPLAIKLVEHSNAPAPALPGQQAPERCYDPSACPPEKLG
                     TAACPGTQVPKPTKKSWGATCGDTSECQTGLECIKGSCETPTKCEDAKDCGEGAECVD
                     GVCHVPTKAELQGRLGPAKHHWIGLHAGVDFNVMHEGTGVCGASTEDSQHFACFEGGN
                     EYAGVPNTLYSGHVKSSLYFATVRAMLSYEYAFARMLVGARIGWAFRGAPKDFSPIHI
                     EVRAHYSLARKPFDEHFRPYLGLVFGHAPVDAYAPTLIVDCTSQDPNIKAACAKSTSK
                     TDLANAIKDPNLAVQRQLNAYHSGAPFFFGPSLQLMYALTNEAAFVFNFTVMLPNVTF
                     EPTIGYQMGL"
     gene            complement(1040..2365)
                     /locus_tag="VLJ38_11575"
     CDS             complement(1040..2365)
                     /locus_tag="VLJ38_11575"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HSU40207.1"
                     /translation="MPSVERGGHGAFFVALGALLVAATCSRESRLETVSSAKRTPEPA
                     AALPAPVAARSGEQPSPAQIPAASLPLAAAVPVLPRFDQALAALESKKRSESVRIVWL
                     GDSHTAADFMTGAVRRRLSERFGAGGPGLIRVGANTYRHDGVKIAREGRWKIEPDPPS
                     RRTTEGDTALGYEGMRTIPLDARAGVELRLDARTLRGTVHYELLFDLPPDASFKVGVG
                     STKHLIDARQKLATVQGSPLRRLKLEGAVSDPFEISAASGLPRFYGVIAEGSEPGVVL
                     DTSGIDGARVATALAWNADVFAAELRARAPELVAIAYGTNEAFDNRRAEIIGVDLATL
                     VERLRRGAPNADCLVVGPPDAAAPDFASLPHVVEIEEVLGRTAARLGCGFFSLRAAMG
                     GEGAFARWLRASPPLARGDRIHFTPAGYEELGNAVARALVAGYEADLKK"
BASE COUNT          418 a          886 c          840 g          371 t
ORIGIN      
        1 gtcgctcgcc atgagacgcc gctcgccatc aaactcgtcg agcattcgaa cgcgccggcc
       61 ccggcgttgc cgggccaaca ggcgcccgag cgttgctacg acccgagcgc atgtcctccg
      121 gaaaagctcg gcaccgcggc ctgccccggc acgcaagtcc ccaaacccac gaaaaaaagc
      181 tggggcgcga cctgcggcga caccagtgaa tgtcagacgg ggctcgagtg catcaagggc
      241 agctgcgaaa cgccgaccaa atgcgaggac gccaaggatt gcggcgaggg cgccgaatgc
      301 gtcgacggcg tctgtcacgt cccgacgaaa gcggagctcc aagggcgtct cggcccggcg
      361 aagcaccatt ggatcggcct acacgccggc gtcgacttca acgtgatgca cgagggcacg
      421 ggcgtgtgcg gcgcgagcac cgaggactcg caacacttcg cctgtttcga gggcggcaac
      481 gagtacgcgg gggtgccgaa cacgctttac tcggggcacg tcaaatcgag cctctatttt
      541 gcgaccgtgc gcgccatgct ctcctacgag tacgcgttcg cgcgcatgct cgtgggggcg
      601 cgcatcggct gggcgtttcg cggcgcaccc aaggacttca gccccatcca catcgaggtc
      661 cgcgcgcact atagcctcgc gcgaaagccg ttcgacgagc acttccgccc gtacctcggc
      721 ctcgtcttcg ggcacgcgcc cgtggacgct tacgcgccga cgctcatcgt cgattgcacg
      781 agccaggatc cgaatatcaa ggccgcttgt gccaagagca cgagcaagac ggatctcgcg
      841 aacgcgatca aggatccgaa cctcgccgtc cagcggcagc tcaacgcgta ccacagcggc
      901 gcaccgttct tcttcggccc ctcgcttcaa ctcatgtacg ccttgaccaa cgaagcggcc
      961 ttcgtcttca acttcaccgt catgctgccg aacgtgacgt tcgagccgac catcggctac
     1021 cagatgggcc tctgagcgtt tatttcttga ggtccgcttc gtagccggcg accagggcgc
     1081 gcgcgacggc gtttccgagc tcttcgtaac cggcgggcgt gaaatggata cgatcgccgc
     1141 gcgcgagcgg cggcgaggcg cggagccagc gcgcgaacgc gccctcgccg cccatggcgg
     1201 cgcgcagcga gaagaagccg cagccgagcc gcgccgcggt tcgcccgagc acctcctcga
     1261 tttccacgac gtgcggcaag gacgcgaagt ccggcgccgc tgcgtcgggc ggtcccacga
     1321 cgagacaatc ggcgttcggc gcgccgcggc gcaacctttc gacgagcgtc gcgaggtcta
     1381 cgccgatgat ctcggcgcgt cggttgtcga acgcttcgtt cgtgccgtac gcgatcgcga
     1441 cgagctcggg cgcgcgggcg cgcagctcgg ccgcgaacac gtcggcgttc cacgcgagcg
     1501 ccgtggccac gcgcgccccg tcgatgccgg aggtgtcgag cacgacgccc ggctcgctgc
     1561 cctccgcgat tacaccgtaa aaccgcggca ggccgctcgc agcgctgatc tcgaacgggt
     1621 cgctcacggc gccctcgagc ttgagccggc gtaacggcga gccctgaacc gtggcgagct
     1681 tctggcgtgc gtcgatcagg tgcttggtgc tgccgacgcc gaccttgaag cttgcgtccg
     1741 gcggcaggtc gaacaaaagc tcgtagtgca cggtgccgcg cagcgtccgc gcgtcgaggc
     1801 ggagctcgac gcccgcgcgc gcgtcgagcg ggatcgtgcg catgccttca tacccgagcg
     1861 ccgtgtcacc ttcggtcgtg cggcgcgacg gcgggtcggg ctcgatcttc cagcggccct
     1921 cgcgcgcgat tttcacgccg tcgtgccggt aagtattcgc gcccacgcgg atgagcccgg
     1981 gcccgcccgc accgaaacgc tcgctcaacc ggcgccgcac cgcgcccgtc atgaagtcgg
     2041 ccgcagtatg cgagtcgccg agccaaacga tgcgcacgga ttcgctacgc ttcttcgatt
     2101 cgagcgccgc gagcgcctga tcgaagcgcg ggagcaccgg caccgcggcg gcgaggggca
     2161 aagacgccgc ggggatttga gccgggctcg gctgctcgcc cgagcgcgcc gcaacgggcg
     2221 ctggtagagc ggcggcgggc tcgggcgtgc gctttgccga gctgaccgtt tcgagccggc
     2281 tctcgcggct gcacgtcgcg gcgacgagca acgctccgag cgctacgaaa aacgcgccgt
     2341 gcccgccacg ctcaactgac ggcatcccac ggctccttgt gcggtccatc ggacacgcgt
     2401 ctctccgcga cccggtcggc cacgtgtgaa agtagcacgt cgaggtacgc ctcgagcggg
     2461 ggacagccga taccggccgg ggcgagcaac tcgagcgcga gacgatcgtc gtacg
//
LOCUS       DATIML010000675         4482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5624607, whole genome shotgun sequence.
ACCESSION   DATIML010000675 DATIML010000000
VERSION     DATIML010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4482
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5624607"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VLJ38_11580"
     CDS             complement(<1..294)
                     /locus_tag="VLJ38_11580"
                     /inference="COORDINATES: protein motif:HMM:NF025057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HSU40208.1"
                     /translation="MKRDDHPIIIVKKVKGHAGHHGGAWKVAYADFVTAMMALFIVLW
                     LLSQTDQSSRQRISQYFRTGVLSGSNSVLSGGTGVEDKGFLDVKGTDATPSEDQ"
     gene            complement(291..1151)
                     /gene="motA"
                     /locus_tag="VLJ38_11585"
     CDS             complement(291..1151)
                     /gene="motA"
                     /locus_tag="VLJ38_11585"
                     /inference="COORDINATES: protein motif:HMM:TIGR03818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HSU40209.1"
                     /translation="MSSILGIVVVLAAVLGGFAMGGGPFAVLIQPNELIVIGGAAIGS
                     VLSSAPGKARGRLLGALKRSFKDSSPTKQDYLDLLKLLYELFGIMRREGILALENHVN
                     ERDKSALFAKYPKVVKRHHAMDFLVEGLKQLVDGCPASDLAQLFDAELETHHEEQHAP
                     VALLRGTGDALPGLGIVAAVLGIVITMAHLDGGPEEIGHHVGAALVGTFLGILLCYGV
                     VGPLANNVEVQDAAEGRYLGCIKEALLAAARGTTPALSIEFGRRAIFTDERPSIEELE
                     KAFQELKKSS"
     gene            complement(1190..2002)
                     /locus_tag="VLJ38_11590"
     CDS             complement(1190..2002)
                     /locus_tag="VLJ38_11590"
                     /inference="COORDINATES: protein motif:HMM:NF013954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HSU40210.1"
                     /translation="MSSAVALIPGLGRPTESALEPPARAPGSFAVATPDASAAERPGV
                     VQAVRTPLTAEQASTLIGDALEHVTGEKPKPETVAILTAQWAHETGHGASMFNYNFAG
                     IKGTGPTGLSVAQRTREGWGTSERTITDNFRAYRTAEEGARDYVSLLKSRFPGALDAA
                     ITGDPAATVHALKQAGYFTGDEGAYTRSVTQIARRVGPASLEFASASTESLPTLPLDY
                     AQGFAVRGAAGSDAAGTTPFVASADFSDHVLRAALRILASPTDEQERAKALT"
     gene            2252..2992
                     /locus_tag="VLJ38_11595"
     CDS             2252..2992
                     /locus_tag="VLJ38_11595"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook basal-body protein"
                     /protein_id="HSU40211.1"
                     /translation="MSTGIWAAASGMVGQQAALDVAAGNIANANTPGFRADRSLFRQT
                     LVAANNRSAPTLALRYSVARTVEPDRRQGQMAQTGQPLDVALRDPNALFVVRTPNGER
                     YTRAGNFQLRPDGKLVTAGGDLVLGPNHKPLSVAADAGAVRIAPTGELEVNGESTGQK
                     LLTVTFPRPEGLVKEGSVLLRSQNAGRPVARDPDLMTETLELSNASALDGMTSLVTAS
                     REFEMMSRVVEAFSDIERRSATDIMSPK"
     gene            3130..4356
                     /locus_tag="VLJ38_11600"
     CDS             3130..4356
                     /locus_tag="VLJ38_11600"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40212.1"
                     /translation="MKRILFVDDDASVLDALRNLLRKRRSEWDMVFAVGGHAALAELD
                     KAAAGQAAFDVVVTDMRMPGMDGAELLKRVRDDFPGTARIVLSGHAERDAVVRALPVT
                     HQFLNKPCDAVTLRSVVERTCNLQALLQNEVTRSVIGKLDRLPSPPATYLRLTEAMAD
                     PRVTSRSIAAIVEEDPAMTVKILQLVNSAYFGLAHAATSVGQAVTYLGLEVLRALTLS
                     AHVFSTAEGTRICRAELDAIQRSSLATATIAKRLVKNRELANDAFTAGIIHDVGRIVI
                     ALALPEKHREISECAAASSKPECSVEQDVLGVTHAEVGAYLLGVWGLPFSIVETTAFH
                     HAPSGAANETPEVLAAVHLASAVVHAAASGEPELDRAFLERVGLASEIDNWRAAAAEY
                     FARLGGAAPARRAANG"
BASE COUNT          779 a         1471 c         1521 g          711 t
ORIGIN      
        1 ctggtcttcg ctcggcgtag cgtccgtgcc cttcacgtcg aggaagcctt tgtcctcgac
       61 gccggtgccg ccggagagca cggagttcga gccggagagc acgccggtgc gaaagtactg
      121 cgagatgcgc tggcgcgacg actgatcggt ttgcgacaag agccacagca cgatgaagag
      181 cgccatcatc gcggtcacga agtcggcgta agcgaccttc cacgcgccac cgtggtggcc
      241 ggcatggccc ttcacctttt tgacgatgat gatgggatgg tcgtcgcgct tcatgacgac
      301 ttcttgagct cctggaatgc cttctcgagc tcttcgatcg aggggcgttc gtccgtgaag
      361 atcgcgcgcc ggccgaattc gatcgacagc gcgggcgtcg tgccgcgcgc ggcggcgagc
      421 agcgcttcct tgatgcatcc gaggtagcgg ccctcggcgg cgtcctgcac ttcgacgttg
      481 ttcgcgagcg gccccacgac gccgtagcag agcaagatgc cgaggaaggt accgacgagc
      541 gcggcgccga cgtgatggcc gatctcttcg ggtccgccgt cgaggtgcgc catcgtgatc
      601 acgatgccga gcacggcggc gacgatgccg aggccgggca aggcgtcgcc cgtgccgcgc
      661 aggagcgcga cgggcgcgtg ttgttcttcg tggtgcgtct cgagctccgc gtcgaagagc
      721 tgcgccagat cgctcgccgg acagccgtcc acgagctgct tcaagccctc gaccaagaag
      781 tccatcgcgt ggtggcgctt gacgaccttc ggatacttcg cgaaaagcgc gctcttgtcg
      841 cgctcgttga cgtggttttc gagcgccaga atgccttcac ggcgcatgat gccgaagagc
      901 tcgtagagca gcttcaatag gtcgagatag tcctgcttgg tcggactcga atccttgaag
      961 ctgcgtttga gcgcgccgag caaacgcccg cgcgccttgc cgggagcgga ggacagcacc
     1021 gagccgatgg ccgcaccgcc gatgacgatg agctcgttcg gttggatcaa gaccgcgaac
     1081 gggccacccc ccatggcgaa gccgccgagg acagcggcta gaacgacgac gataccgagg
     1141 atggatgaca caattccgga ttcctagaac gggcgggttg gcattcggtt taggtgaggg
     1201 ctttcgcccg ctcctgctca tctgtaggtg aagccaagat acggagggct gcgcgcagca
     1261 cgtgatcgct gaagtcggca gaggcaacga aaggagtcgt gccggcggcg tcgctgcccg
     1321 ctgctccacg cacggcgaaa ccctgcgcgt agtcgagcgg caacgtgggc agcgactcgg
     1381 tgctcgcgct cgcgaactcg agcgaagcgg ggccgactcg acgcgcgatt tgggtgacgg
     1441 agcgcgtgta ggcgccttca tcaccggtga agtagccggc ttgtttgagg gcgtgcaccg
     1501 tcgccgcggg atcgccggtt atcgcggcgt cgagcgcacc ggggaagcgc gatttcaaga
     1561 gcgagacgta gtcgcgcgcg ccttcttcgg ccgtgcgata cgcgcggaaa ttatcggtga
     1621 tcgtgcgttc gctcgtgccc cagccttcgc gcgtgcgctg ggcgacggag agccccgtgg
     1681 gccccgtgcc tttgatgccg gcgaagttgt agttgaacat cgacgcgcca tggcccgttt
     1741 cgtgcgccca ctgcgccgtg agaatggcga cggtctcggg cttcggcttt tccccggtga
     1801 cgtgctcgag cgcgtcgccg atgagggtac tcgcttgctc ggcggtcaaa ggcgtgcgga
     1861 cggcctgcac gactccgggg cgctccgcgg ccgaggcgtc cggcgtggcg acggcaaatg
     1921 acccgggagc acgcgctggc ggctcgagcg cgctttcggt cggtcgaccg agacccggga
     1981 tgagcgccac agcggacgac attcgtacgc gaccttcgca agaagcaggc cagacgcagc
     2041 gcgaggcgcg tctgggattt tcccgtctcg aagcgaggca cgccgccacc gagctgaccg
     2101 cggggtgtca acgcgccgac gcgactcacg cacgctgccg cgaccaccac cagaacggcg
     2161 acgagacgcg acgcgacgcg atgatagggc cgctggcact cgccttgctt tgacgagact
     2221 cggagcggca gcgcaagcga ggaatgtcga aatgagcacc ggtatctggg cggcagcatc
     2281 ggggatggtc ggacaacaag cggcgctcga cgtcgcggcc ggcaacatcg ccaacgccaa
     2341 taccccggga tttcgtgccg atcgctcgct gttccggcag acgctcgtcg cggcgaacaa
     2401 ccgctcggcg ccgacgctcg cgctccgtta ctcggtggcg cgcaccgtcg aacccgatcg
     2461 ccgtcaaggt cagatggcgc aaaccgggca gccactcgac gtggcgctgc gcgatccgaa
     2521 cgcgctcttc gtcgtgagga caccgaacgg cgagcgctac acgcgcgccg gcaacttcca
     2581 gctccgtccc gacggcaagc tcgtgacggc cggcggcgac ctcgtgctcg gccccaatca
     2641 caagccgctc tccgtggcag ccgatgccgg cgccgtgcgc attgccccga cgggcgagct
     2701 cgaagtgaac ggcgaaagca cgggccaaaa gctcctgacc gtgacctttc ctcgacccga
     2761 agggctggtg aaggaaggct cggtgctctt gcgttcgcaa aacgcgggcc gtccggtggc
     2821 gcgcgacccc gacctcatga ccgagacgct cgagctgtcc aatgcctctg cactggacgg
     2881 aatgacgtcg ctcgtcaccg cgtcgcgtga gttcgagatg atgtcccgtg tcgtcgaagc
     2941 gttcagcgat atcgagcggc gctcggcgac ggacatcatg tcccccaagt aggatagcgg
     3001 gcaccggccg cagggacgaa aggtgcttaa cggacgctcc cttcgtgccg tttcgtcgat
     3061 gggcaacgtg ggtccacaag agcttcgagg aatgaaggcc gagagtcgtc aacgagcacg
     3121 agaggcagag tgaagcgcat cctcttcgtc gacgatgacg cgagcgtgct cgacgccttg
     3181 cgcaacctct tgcgcaaacg caggagcgaa tgggacatgg tgttcgccgt cggcgggcac
     3241 gcggcgctcg cggagctcga caaagcggcc gccgggcaag ccgccttcga cgtggtcgtc
     3301 accgacatgc gcatgcccgg catggacggc gcggagctac tcaagcgcgt gcgtgacgat
     3361 tttccgggca cggcgcgcat cgtgctgtcg ggtcacgccg agcgcgacgc ggtcgtgcgc
     3421 gcgctgccgg tgacgcacca gttcttgaac aagccgtgcg atgccgtgac gctgcgcagc
     3481 gtcgtcgagc gcacctgcaa tttgcaggcg ctgctccaga acgaagtcac gcgcagcgtg
     3541 atcggaaagc tcgatcggct gccctcgccg cccgcaacct acctccggct gacggaagcg
     3601 atggccgacc ccagggtcac ctcgaggagc atcgccgcca tcgtcgaaga ggatcccgcg
     3661 atgacggtga agatcctcca gctcgtcaat tcggcgtatt ttgggctcgc gcacgcggcg
     3721 acatcggtcg gccaagccgt gacgtacctc ggcctcgagg tcctgcgcgc gctcacgttg
     3781 agcgcccacg tgttcagcac ggcggaaggc acgcgcatct gccgcgcgga gctcgacgcg
     3841 attcagcgga gctcgctcgc gacggcgacg atcgccaagc gcctggtcaa gaaccgcgag
     3901 ctcgccaacg acgcgttcac ggccggtatc atccacgacg tggggcgcat cgtgatcgcg
     3961 ctcgcgctgc cggagaaaca ccgggaaatc agcgagtgcg ccgccgcgag cagcaagccc
     4021 gagtgcagcg tcgaacaaga cgtgctcggc gtgacccacg ccgaggtcgg cgcatacctc
     4081 ttgggcgtct gggggctccc tttctccatc gtcgaaacca cggcgtttca tcacgctccg
     4141 agcggagccg ccaacgagac accggaggtg ctcgcggccg tacacctcgc gagcgccgtc
     4201 gtacacgcgg ccgccagcgg tgaacccgag ctcgatcgcg cgttcctcga acgcgtgggg
     4261 ctcgcctccg aaatcgacaa ctggcgggct gctgccgccg aatatttcgc tcgcctcggc
     4321 ggcgccgccc ccgcgcgccg ggcggcaaac ggttagccca tggaacataa aggtcgcccc
     4381 aaaatcctct gcgtcgacga cgagccgaac gtcttggagg gactcgcgct gcatttgcgc
     4441 cgccgctacg acgtcacgac cgcgaccaac ggcgctgcgg cg
//
LOCUS       DATIML010000676         2504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1873088, whole genome shotgun sequence.
ACCESSION   DATIML010000676 DATIML010000000
VERSION     DATIML010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1873088"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..1800
                     /locus_tag="VLJ38_11605"
     CDS             181..1800
                     /locus_tag="VLJ38_11605"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU40213.1"
                     /translation="MSDTVVLPQSPVLGPQPGDIIAGRYRLERELGRGAMGMVWAAMH
                     TTLAQRVAIKLIAADKARSSEARQRFALEAKAAARLRSRHVVQVYDDGETPDGTPYIV
                     MEYLEGQTLEERLEARPDMGLGEAVRIATHVGRALARAHAQGVVHRDLKPGNIFIAKS
                     DDDELGWLAKVLDFGVAKVLNEPSATRTGTIVGTPLFMSPEQIRGAAQVDHRADLYSL
                     GMVFYNMVTGSHAFDGPSYSDVLVAICTQSLPDIRNVAPWLPPAVGTWFDKACARERE
                     ARFQSADEMIEALQEAVGPHSRLTRPSVPDEISGPSGTLVGHVPPHTATTLLAGQFAH
                     PPPSIAHAPSTPHAAQPRVGGAGAGRADPGRAAGPRIDAAPPSSRRETTLRSTPTDPV
                     LAPVPRARTSLWLWAASGAGLAVGMVVLVVAVLRTSAWLTAPSPRAEPHATSPGSGPP
                     TSTERALPHADAPRSTATSTPLAPLTAPPTVVPVPTPTVASPITHRSPSSARRTDSLT
                     PSRTAPPLPAAKPAATAEKPPSAAAAPDMGF"
     gene            1826..>2504
                     /locus_tag="VLJ38_11610"
     CDS             1826..>2504
                     /locus_tag="VLJ38_11610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40214.1"
                     /translation="MSFANLRLSGALALAFVTVLGVSGTAAAQDANQAENIAAARSLG
                     IEGVQLAEAGKCDQAIEKLSRAEALYHAPTILDRLGECQITVGQIVLGTENLNRVVRE
                     PLAANAPKAFRDAQARAKKALDAALPRIGYLTVTVEPKEAKITVTVGGAPVPDALIGA
                     ERPTDPGTREVVASAPGYLTQKTTVTLAEGGHEAVTLRLPLDPNAPKPGADVPAAVAP
                     PPVPPPPP"
BASE COUNT          402 a          925 c          817 g          360 t
ORIGIN      
        1 aggctttgct cgttcgggcc cccgttcgag gggccgcgga tagtaccgcc gcccgtgcat
       61 aggtcaacgc gaatcgcgcc cctcggcggc cgaaacgggc ggagattggc gtattgggag
      121 ggggggagcg taaactcgga gcgccgtgtt tggggcgtcc gcccgggcgc tcggccgtcc
      181 atgagcgaca ccgtcgtttt gccgcaatca cccgttctgg ggccgcagcc cggcgacatc
      241 atcgccgggc gttatcggct cgagcgcgag ctcgggcgcg gcgcgatggg catggtgtgg
      301 gcggcgatgc atacgacgct cgcgcagcgc gtcgccatca agctcatcgc cgcggacaag
      361 gcgcgttcga gcgaagcacg ccaacgtttc gcgctcgaag ccaaagccgc ggcacgcctc
      421 cgctcccgcc acgtggtgca ggtgtacgac gacggcgaga cgccggacgg cacgccttac
      481 atcgtgatgg agtacctcga gggtcaaacg ctcgaggaac ggctcgaggc gcgcccggat
      541 atgggactcg gcgaggcagt gcgcattgcg acgcacgtcg gccgggcgct cgctcgcgcg
      601 cacgcgcaag gtgtggtcca tcgcgatctc aagcccggca acatcttcat cgccaagagc
      661 gacgacgacg agctcggctg gctcgccaag gtgctcgact tcggcgtcgc gaaggtgctg
      721 aacgaaccgt ccgccacgcg cacgggcacc atcgtgggga cgccgctctt catgagcccg
      781 gagcagatcc gcggcgccgc acaagtcgat caccgcgcgg atctctattc gctcggtatg
      841 gtcttttaca acatggtgac ggggtcgcac gcctttgacg ggccctcgta tagcgatgtc
      901 ttggtcgcca tttgtacgca gtcgttgccc gacattcgca acgtggcgcc gtggctgccg
      961 ccggccgtcg gaacctggtt cgacaaggcg tgcgcacgcg aacgcgaagc tcgcttccaa
     1021 agcgccgacg agatgatcga agcgttgcaa gaagccgtag gtccgcactc ccggctcacg
     1081 cgaccgtccg tgccggacga aatcagcggg ccttcgggta cgctcgtcgg acacgtgccg
     1141 ccccacaccg cgacgacgct cctcgccggt cagttcgcgc accccccgcc gtcgatcgcg
     1201 cacgccccct ccacgcccca cgcagctcag cctcgcgtcg gcggggcggg cgcgggtcgt
     1261 gcagatcccg gtcgagccgc cggaccgcgc atcgacgctg cgccgccgag ctcacgccga
     1321 gaaacgacgc ttcggagcac gccgaccgat cccgtactcg cgccggtgcc ccgagcgcgc
     1381 acgagcctct ggctctgggc ggcgagcggc gcaggactcg ccgtcggcat ggtcgtactc
     1441 gtcgtcgccg tgctgcgcac ctccgcatgg ctcacggcgc cgtcgccccg agctgagccg
     1501 cacgcgacgt cgcctggcag cggcccgccg acgtcaactg aacgcgcgct gccgcacgcc
     1561 gacgcgccgc gatcgacagc aacgtcgaca ccgctggcac cgctgaccgc ccctcccacc
     1621 gtcgtcccgg ttccgacccc aaccgtcgcg tccccgatca cgcaccgctc cccgagctcc
     1681 gcgcgccgaa cggactcgct cacgccctcg cgaaccgcgc cgcccctgcc agctgcaaaa
     1741 cccgcggcta cggcagaaaa acctccgtcc gcagcggccg ctcccgatat gggcttctaa
     1801 cccggctttg ggtagagtgc cgaacatgtc gttcgccaac cttcgcttat cgggggcgct
     1861 cgcccttgcg ttcgtgaccg tgctcggtgt ctcgggcacc gccgccgctc aggacgcgaa
     1921 ccaagccgag aacatcgcgg cggcccgctc gctcggcatc gaaggcgtgc agcttgccga
     1981 agcgggcaag tgcgaccaag cgattgaaaa gctcagccgg gccgaagcgc tttatcacgc
     2041 gcccacgatt ctcgatcgcc tgggcgagtg ccagatcacg gtcggccaaa tcgtgctggg
     2101 caccgagaac ctcaatcgtg tcgtgcgtga gccgctcgcc gcaaacgcgc ccaaggcgtt
     2161 tcgcgacgcg caagcgcgcg ccaagaaggc gctcgacgcc gcgttacctc gcatcggtta
     2221 tttgaccgtc acggtcgaac cgaaggaagc caagatcacg gtgaccgtgg gcggcgcgcc
     2281 cgtgccggat gcgctcatcg gcgccgagcg tccgaccgat ccggggacgc gcgaggtcgt
     2341 cgcgagcgct cccgggtact tgacgcagaa aacgacggtg acgctcgccg aaggcggcca
     2401 cgaagcggtc accctgcgcc tccccctcga tccgaacgcg ccgaagccgg gcgccgacgt
     2461 acccgctgct gtggcgcccc cacccgtgcc gcctccgcca cccc
//
LOCUS       DATIML010000677         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_427041, whole genome shotgun sequence.
ACCESSION   DATIML010000677 DATIML010000000
VERSION     DATIML010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427041"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..>1648)
                     /locus_tag="VLJ38_11615"
     CDS             complement(189..>1648)
                     /locus_tag="VLJ38_11615"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HSU40215.1"
                     /translation="QLAQLFEQLARLNERVAELLAVAQRKQRKARAPIAPPPAAPPPV
                     VADDQQRAFEERPKAPEKSIAERTAKAKAKPTGRKPLPRHLETEEHELRPELCAACGG
                     HALDVADELVEEKLHVVKEHQRRRVVRRYTCRCRACGERTTLRSLPAPYERSKVTCEW
                     LAWLVYQKFWLLTPLDRIRRDLAEREIPIAMSTLVSFIERAADLLSGVDGLHWKQLLA
                     GSWMATDGTGLKVIVPKLPAAHNGYLELYRNDELAVFQYEPDKSGDVVAARLRPFRGT
                     LTADAEHRFNDVFASGRVLEAGCNAHGRRKFRDAEDTQLVLAAEGGAFLGAMYGEEEK
                     AQKLGLSGDALRDHRQQYIRPIVRDFQRWLEAVKPTLLPSEPLAAAIAYYKNHGAALF
                     RFVDDPLVPIDNSPTEREFQNVAKLRLNMLFAGSTEGAHRACVLLGIIATCRALRVPA
                     QAYLVWAFERLGTHRDLFNLPLEALTPAAFKKTLG"
BASE COUNT          282 a          474 c          593 g          299 t
ORIGIN      
        1 tcacttccag agattctcgt ccaaacgttg gacaagtcgt ctaccacctg ggctggccag
       61 cactaccgcc cggatgaccc ctcccgcctt tgaagaatcg agccgcggcg cggcccatcc
      121 gcgtcgtttg gcgcggagtg accgatcagc gaaggcggga tgcgaagcgc gcggaatcgt
      181 gctgagcgct agccgagcgt tttcttgaag gcggcgggag tcagggcttc gagcgggagg
      241 ttgaagaggt cgcgatgggt gcctagccgt tcgaaggccc aaacgagata agcctgggcg
      301 ggcacgcgca gtgcacggca ggtggcgatg attccgagca gaacgcaggc gcggtgagcg
      361 ccttcggtgc tgccagcgaa gagcatgttg aggcgtagct tggcgacgtt ctggaactcg
      421 cgctcggtgg gcgagttgtc gatgggcacg aggggatcgt cgacgaagcg gaagagcgca
      481 gcgccgtggt ttttgtagta ggcaatcgcc gccgccagcg gctcggaagg gagcagggtt
      541 ggtttgacag cctcgagcca ccgttggaaa tctcggacga tgggacggat gtattgctgt
      601 cgatgatcac ggagtgcgtc accgctgagg cctagctttt gtgccttctc ttcttcgccg
      661 tacatggcac cgaggaacgc gccgccttca gccgcgagca cgagctgggt gtcctcggcg
      721 tcgcggaact tgcggcgtcc gtgcgcgttg cagccagctt caagcacgcg gcctgaagcg
      781 aagacgtcgt tgaatcgatg ctcagcgtcg gcggtgagag tgccgcgaaa cggacggagc
      841 ctcgcggcca cgacatcgcc gctcttgtcg ggctcgtact gaaagacggc gagctcgtcg
      901 ttgcgataaa gctcgagata gccgttgtgc gcggcgggga gcttgggaac gatgaccttg
      961 agccctgtcc cgtcggtggc catccacgag cctgcgagca gttgtttcca gtgcaagcca
     1021 tcaacgcccg agagcaagtc agcagcgcgc tcgatgaagg agacgagcgt gctcatggcg
     1081 atcggaatct cgcgctcggc gagatcacga cgaatgcggt cgagcggcgt gagcagccag
     1141 aatttctggt aaacgagcca ggcgagccat tcgcaagtga ctttagaacg ctcgtacgga
     1201 gccggcagcg agcggagcgt ggtgcgctcg ccgcacgcgc ggcagcggca agtgtagcgt
     1261 cgcacgacgc ggcggcgctg gtgctccttg acgacatgga gtttctcttc gacgagctcg
     1321 tcggcaacgt ccagggcatg gccgccacag gcggcacaca actcgggccg cagctcgtgc
     1381 tcctcggtct cgaggtggcg aggaagcggc ttgcgcccag tcggcttggc cttcgccttc
     1441 gccgtgcgct cggcgatgga tttttcaggc gccttggggc gctcttcgaa cgcgcgctgc
     1501 tggtcgtccg ctacgacggg cggcggcgcg gcgggcggcg gcgcgattgg ggctcgagct
     1561 ttgcgctgct tgcgttgcgc tacggcgaga agctcggcaa ctcgctcgtt gagacgtgcg
     1621 agttgctcga agagttgtgc gagttggc
//
LOCUS       DATIML010000678         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2735845, whole genome shotgun sequence.
ACCESSION   DATIML010000678 DATIML010000000
VERSION     DATIML010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2735845"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..552)
                     /locus_tag="VLJ38_11620"
     CDS             complement(73..552)
                     /locus_tag="VLJ38_11620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40216.1"
                     /translation="MRAMLIVGSLVCLALGSACNTARQQQEKANEAQAEADRKIADAT
                     QKASAQINEAQADADRKKAEAQATFDKLREDYRHDITTKLADLDKKIADLDAKAKTEP
                     PKKKAELDAKLADIHASRDAFVNEYHSVETASAATWDDVKKRVDKSWNELEAKVNRA"
     gene            complement(772..>1648)
                     /locus_tag="VLJ38_11625"
     CDS             complement(772..>1648)
                     /locus_tag="VLJ38_11625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40217.1"
                     /translation="SRCSADLPPVAFSTTGFTRIHSEPVLSAAVGTPPRAAVWSGQSV
                     FLFDGAQARELPAPTLPPRSSVELFFGRDNQPRLMGFAPSETGDDVPVYLRFRQGTFR
                     AEPSELGPLARPRGALYGVLGFADPEVVCRPRELCLVKRTTGWQRAPAHDAPAHVILR
                     NGAVFALRADRIERLVERSWTPLEPARAFDHPLDAWLAPSGELWVVDSSADGLFRLRS
                     GRWEPVTSPIAEPRAVFDRSERALFVVGTNGAAEFDGHTFRCVSNVSGPLHLAFAVGD
                     RVWLAGESGVYRSGE"
BASE COUNT          263 a          526 c          565 g          294 t
ORIGIN      
        1 ttggttgcgc cgcgccggcg aacgaccgcc ctgcgtccta cgcgatggtc tggagcgaca
       61 gcgaggctcc gctcaggcgc ggttcacttt tgcctcgagc tcgttccacg acttgtcgac
      121 gcgcttcttc acgtcgtccc aggtggcggc cgacgcggtc tccaccgagt ggtactcgtt
      181 gacgaacgcg tcacggctcg catggatgtc ggcgagcttg gcgtcgagct cggccttctt
      241 cttgggcggc tcggttttgg ctttggcgtc gaggtcagcg atcttcttgt cgaggtcggc
      301 gagcttggtc gtgatatcgt gtcgatagtc ctcgcgcagc ttgtcgaacg tggcttgcgc
      361 ttcggccttc tttcggtcgg cgtcggcttg cgcctcgttg atttgcgcgc tggccttctg
      421 cgttgcgtcg gcgatcttgc gatcggcctc ggcctgcgcc tcgttggcct tctcctgctg
      481 ttggcgtgcg gtattgcacg ccgaacccaa ggccaaacac accagacttc cgacgatgag
      541 cattgctcgc atggaatctc tcctcgcgca cgacgaggag caatccgcat gccgatgcga
      601 agggcgatat agccgatctg aagacggcgg cgggtctcct cgccacaagc gggacaaaaa
      661 aggggcgcca gcagtcgaac tgaacgtcag aagctcgctc ggtcgctggt acggcggtcg
      721 ctgttcaaca gcagttcgag ccgggcggcc cgccagggct ccagccgaat cctattcgcc
      781 gcttcgatag acgccgctct ccccggcgag ccagacgcgg tcacccacgg cgaacgcgag
      841 atggagcgga ccgctcacgt tgctcacgca gcgaaacgtg tggccgtcga attcggcggc
      901 gccgttcgtg cccacgacga agagggcgcg ctcggagcgg tcgaaaacgg cgcgcggctc
      961 ggcgatgggt gaggtgacgg gttcccaacg cccggagcgc agcctgaaga gtccgtctgc
     1021 ggaggagtcg acgacccaca gctcaccact cggcgcaagc catgcgtcga gcgggtgatc
     1081 gaaagcacgc gctggttcga gcggtgtcca gctacgctcg acgaggcgct cgatgcgatc
     1141 ggcgcgaagt gcgaacaccg cgccgtttcg caggatgacg tgcgccgggg cgtcgtgcgc
     1201 cggggcgcgc tgccagccgg tcgtgcgttt gacgagacag agctcgcgtg gtcgacatac
     1261 gacttcggga tcggcgaagc ccaagactcc gtagagcgcg ccacgcggcc gcgcgagcgg
     1321 cccgagctcg ctcggctctg ctcgaaacgt gccctggcga aagcgtaggt agaccggcac
     1381 gtcatctccc gtttcgctcg gcgcgaaccc catcaagcgc ggctggttgt cgcggccgaa
     1441 gaagagctcg acgctggagc gcggcggcag agtcggcgct ggaagctcgc gtgcttgtgc
     1501 gccgtcgaac aggaacacgc tttgacctga ccacaccgcc gctcgtggtg gcgtgccgac
     1561 tgccgcagac agcactggct cggaatggat ccgcgtgaat cccgtcgtag agaaggcgac
     1621 aggtggtagg tccgcggagc agcgcgac
//
LOCUS       DATIML010000679         3905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5050935, whole genome shotgun sequence.
ACCESSION   DATIML010000679 DATIML010000000
VERSION     DATIML010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3905
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5050935"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VLJ38_11630"
     CDS             complement(<1..501)
                     /locus_tag="VLJ38_11630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40218.1"
                     /translation="MATPNVARRTKPSRASLLALAALLAGCSSLLGIDDLSTNPRDGS
                     AAGSGAQAGSGGTGGANSGGSAGVPGGRNGSGGGNGAHGGAGGSTGGNGTGGSNTGGA
                     AGSGANAGAGATGHTGGTGGAGGSGAEAAGGAGEGGGGNPTDSTVHGTIIDFWQHPVA
                     NVPVAIG"
     gene            complement(501..1433)
                     /locus_tag="VLJ38_11635"
     CDS             complement(501..1433)
                     /locus_tag="VLJ38_11635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40219.1"
                     /translation="MVALAAPARAEAGSSNAAAAEALFAEGRRLANEGNYSDACPKFE
                     ASQKLDPGLGTLLNLADCYEKIGKTASAWAEYREAIPLARAAGSSEREKLALDCSKAL
                     ESRLSTLTIRAMGGDNGDAALDVRRDGVSVDSAQLGVAIPVDPGWHEVTASSSGQKPW
                     SAKVQVGANGEKVVVEVPKLVPAEGSAAAGLMAPPDQASGHKSSPQRPIAIAVGAVGV
                     VGLGLGTFFGLSASSTWKDAKAACRDYPYECTQEGLDKQDSAQSKATISTVAFIAGGV
                     ALATGIVLFVTAGSGKQETAIGIGPGSIVARRSF"
     gene            1518..1757
                     /locus_tag="VLJ38_11640"
     CDS             1518..1757
                     /locus_tag="VLJ38_11640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40220.1"
                     /translation="MSDRARPGGSTQRVPEPFDPEPVPVLPPGVPEVVELPGVLAPPG
                     AVSFGVVLPPGPLVPELPFPVSVPAPLGAPLLGFV"
     gene            complement(2032..2745)
                     /locus_tag="VLJ38_11645"
     CDS             complement(2032..2745)
                     /locus_tag="VLJ38_11645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HSU40221.1"
                     /translation="MSPLTLAFPLGFGLAFFGSVPMSGPVAVLFMARMLNADRGPAML
                     VALGGSLVEAGYALGIAFALPHLVGRTQVVVLASLALGSVVVTTLGTVLLTRPNLVQR
                     AAQTSAKRGFVRGALSSLFNPTLIATWTVAVSTLYANGWLSKELSSAAGFALGVALGS
                     LAWFGIVLAVTKARNLRVTPELNTKLLRGMGGLLVCSGIFLAVRFVVTLQHPERRNQQ
                     TLERAGHLLDELSHHRSEP"
     gene            complement(2905..3294)
                     /locus_tag="VLJ38_11650"
     CDS             complement(2905..3294)
                     /locus_tag="VLJ38_11650"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HSU40222.1"
                     /translation="MKIGEFSRQLGLSVPTVRYYEALGLLEPPARVSGRRRYGAEALN
                     GLRLVLALKRSGFRLSEIRQLMPLEARARTPERWREIARHKVAELDAQIAELCQARAA
                     LTSSLSCDCDGRAERCALVANTTGTQR"
     gene            3419..3790
                     /locus_tag="VLJ38_11655"
     CDS             3419..3790
                     /locus_tag="VLJ38_11655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40223.1"
                     /translation="MPLESTERPIACDLSQIPPELRERLARDFQRIFGRATALRALPD
                     GFALEFSNEHGTVAGLGEIIEYDRRCCPFIRHTLVHEPWDGPIRLELTGTPDVREFIA
                     AELVPFLPAELVRAAGMQVSP"
BASE COUNT          618 a         1351 c         1313 g          623 t
ORIGIN      
        1 accgatcgca accggcacgt tcgccaccgg gtgctgccag aaatcgatga tcgtgccgtg
       61 cacggtcgag tcggtcgggt tcccgccgcc accttcgccc gcgccgccgg cagcctcagc
      121 gcctgaaccg ccggcgccgc cggtcccgcc cgtatgcccg gttgcgccgg caccagcatt
      181 ggcgccgctt cccgccgcgc ccccggtgtt gctcccgccg gtaccgttgc cgccggtgct
      241 gccgcccgcg ccaccgtgcg cgccatttcc tccgccgctg ccgttgcgac cgccgggcac
      301 gcccgcgctg ccgccgctgt tcgcgccgcc cgtgccgccg ctcccggcct gggcgccgct
      361 gccagccgcg gaaccgtcgc gcgggttcgt gctcagatcg tcgatgccga ggagcgacga
      421 gcaccctgcg agcagtgctg cgagcgccag gaggctcgct cgtgagggct tcgttcggcg
      481 agcgacattc ggcgtcgcca tcagaagctc ctccgcgcga cgatggaccc gggtccgatg
      541 ccgatcgcag tttcctgttt cccggaccca gccgtcacga acagcacgat gcccgtcgcg
      601 agtgcaacgc ctcccgcgat gaaggcgacc gtcgagatcg tcgctttcga ttgcgccgag
      661 tcttgcttgt cgaggccttc ctgcgtgcac tcgtaggggt aatcccggca ggcggctttc
      721 gcgtccttcc aggtggagga ggcgctgagg ccgaagaacg tgccgagacc gaggccgacg
      781 acgccgaccg cgcccacggc aattgcgatg ggccgctgcg gcgacgactt gtgcccgctc
      841 gcttgatcgg gcggggccat caaaccggcc gcggcagagc cttcggcagg gacgagcttc
      901 ggtacttcga cgacgacctt ctcaccgttg gcgccgactt ggaccttcgc cgaccacggc
      961 ttctggccgc tgctggaggc cgtgacctcg tgccagccgg gatcgacggg aatggcgaca
     1021 ccgagctggg cgctgtcgac cgagacgccg tcgcgccgaa cgtcgagggc ggcgtcgccg
     1081 ttatcgccgc ccatcgcgcg gatggtgagc gtcgagagcc gggactcgag cgccttcgag
     1141 cagtcgagcg cgagtttttc ccgctcgctc gagccggcgg cgcgtgcgag cgggatcgct
     1201 tcacgatatt ccgcccaggc gctcgccgtc ttgccgatct tttcgtaaca gtcggcgagg
     1261 ttcaggagtg tgccgaggcc cggatcgagc ttctggctag cctcgaattt gggacaagcg
     1321 tcggagtagt tgccttcgtt cgcgagtcgc cggccttcgg cgaagagcgc ctccgccgcg
     1381 gccgcattcg acgagcctgc ttccgcccgt gcaggggcgg ccaacgcaac cacgagaagt
     1441 cccgaaaata aggttttcca ccgcaccaga ccttcggtat cgcactcggc acgcgctgac
     1501 aagtctcgcc gccgagcatg tcagatcgcg ctcggccggg aggatcgact cagcgggtac
     1561 ccgagccgtt cgatccggag ccggtgcccg tgctgccgcc tggagtcccc gaagtcgtgg
     1621 aactgcctgg tgtgctcgcg cctcctggcg ccgtgtcgtt cggcgtggtg ctgcctccag
     1681 gcccgctcgt gccggagctg ccattccccg tgagcgtccc cgcgccgctc ggggctccgt
     1741 tgctggggtt cgtttgattc tgtggaggag tgaagtccgg attgttggat ggagttgagg
     1801 tggcgccctc gaccgtctgc gcggaggcgg gcggccgatc gttaccgtgg ctgcaagcga
     1861 atgcgagcaa acaagcgagc agaatggtcg gatgcttcat gagtttcact cgagcaataa
     1921 gcagaccaaa gttctggccc agcgaatctc ggctcgccgt cagcacgtgg cgcagccgca
     1981 cgcggctcga gagcacatcg cggcgagata cacccgaggc cgctttgcag actaaggttc
     2041 gctgcggtgg tgcgagagct cgtcgagcaa atggcccgcg cgctcgagcg tctgctggtt
     2101 tcgccgttcg ggatgctgga gcgtcacgac gaagcgaacg gcgagaaaaa tgcccgagca
     2161 gacgagcagc ccgcccatcc cgcgcaggag cttggtgttg agctccggag tgacgcgcag
     2221 gttgcgcgcc ttggtgacgg cgagcacgat gccgaaccag gcgagcgagc cgagtgcgac
     2281 accgagcgcg aacccggccg ccgagctcag ctccttcgac aaccagccgt tcgcgtaaag
     2341 cgtgctgacg gcgaccgtcc acgtcgcgat gagcgtcggg ttgaacaggc tggacaaggc
     2401 gccgcgcacg aagccacgct tcgcgctcgt ctgcgcggcg cgctgcacga ggttcggacg
     2461 cgtgagcagc acggtgccga gcgtcgtgac gacgacggag ccgagcgcga gcgaggcgag
     2521 cacgaccact tgcgttctgc cgaccaagtg cggcaaggcg aacgcgatac cgagcgcgta
     2581 gccggcctcg acgagcgagc cgccgagcgc gacgagcatg gcggggccac ggtcggcatt
     2641 gagcatacgg gccatgaaca gcacggcaac cggaccgctc atgggcaccg agccgaagaa
     2701 agcgaggccg aacccgagtg gaaaggcgag ggtcaaagga gacaccgagc atcgcacggc
     2761 aatgcctgtt ccagcgcctc cgcccgttta tggcggcgcg agcgcaacat ccgcggctcg
     2821 ctgcgccgcg ctgaggccaa aatgcgcgct cgtcgactct cgtacggcgg gtctgcagcg
     2881 tccgtcaccg acgaggtcgt cggttcaacg ctgcgtgccc gtcgtattcg cgaccagcgc
     2941 gcagcgttcc gcccggccgt cgcagtcaca actgagcgag ctcgtgagcg ccgcgcgcgc
     3001 ctggcagagc tcggcgattt gcgcgtcgag ctcggcgact ttgtgacgag caatctcacg
     3061 ccatcgttcg ggcgtgcgtg cgcgcgcttc gagcggcatg agctgcctga tctccgatag
     3121 ccggaagccc gagcgtttga gcgcgagcac caggcgcagg ccgttgagcg cctccgcacc
     3181 atagcggcgg cgtcccgaaa cgcgcgccgg tggctcgagc aaaccgagag cctcgtagta
     3241 gcggacggtc ggaacactga ggccgagctg ccgcgagaat tcgccgatct tcatgagccc
     3301 gcatccagtt tgccacctca cggacgaacg gcacgcccgg attgatttga cctcgagcgt
     3361 acttgagctc gtagcgtccc cctgcgagcg cccttcgcgt ctcgcgacca ggaacaccat
     3421 gcctctcgaa agcaccgaac gacccatcgc ctgtgatctc agccaaatac cccccgagct
     3481 gcgcgagcga ctcgcgcgcg atttccagcg catcttcggg cgcgcgacgg ctctgcgcgc
     3541 cctgcctgac ggcttcgcgc tcgaattttc gaacgagcac ggcaccgtcg cggggctcgg
     3601 cgaaatcatc gaatacgatc gccgctgctg ccccttcatc cgccacacgc tggtccacga
     3661 gccgtgggac ggcccgatcc gactcgagct gacgggcacg cccgacgtgc gcgagttcat
     3721 cgcggccgaa ctcgtgccct tcttacctgc ggagctcgtg cgagcggcgg gcatgcaggt
     3781 gagcccctga gctaaaccgt cagcggacgg cagaatttcc agttggcgcc gggaccgagt
     3841 tcgcgcgaag ctgcgcggcc cgatgcccct cgagttcgcg cttcgtcccc gcttcgacct
     3901 ggagc
//
LOCUS       DATIML010000680        12330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3314391, whole genome shotgun sequence.
ACCESSION   DATIML010000680 DATIML010000000
VERSION     DATIML010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 12330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12330
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3314391"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1589
                     /locus_tag="VLJ38_11660"
     CDS             <1..1589
                     /locus_tag="VLJ38_11660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40224.1"
                     /translation="LPVRPGSATGTPLPVRPAPRPGVSAAPTATPLPLQSTNGNGARA
                     NGTPPQNDPTATPPRDAAPVTNGGATATPSPSPTTIKAKLVALSPGLLGVSTAMKEKA
                     PLKSSPDGERAPESGVPHSIPDAELFDVDGPTSSKPPDSAVPIDSVDYVESLPPPVAP
                     VHRSAAVHNRAANQTTKRMPTAPHPPHAPHPPHPPQATANASGESPRRRVPSGDLSDD
                     FLSTDLGFDAAPAIAPPDANSLLRAPVSVRPPGTSARPTSQTSTRAPVSSPSNVAPES
                     KSSARGIVFVLVAAVFGTAGYYWTHRLQAPPEPGAPPVSAVATTEPAATTTAEPTGNT
                     PSQPTPPEANAQAPGGDQPGAASTTPATTRTAPAATDAPTAAAGAVAPSEKSGKSRVE
                     RSTRESGSSPSTAESEAAPAKTEAAAPEAAPAATSKTVVEPRGPVGTDPFDVAAARSA
                     LEMSADQASSCRKDGDPSGVAVVTITFSPTGRVTTATISGPPFQATPTGGCIASTMRR
                     TRVPPFAGDMVTVRKTVTIQ"
     gene            complement(1684..4740)
                     /locus_tag="VLJ38_11665"
     CDS             complement(1684..4740)
                     /locus_tag="VLJ38_11665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40225.1"
                     /translation="MTAFRRVLVGALVLAAVGCERDDADYGQTTFYDRKITPALHTSG
                     CTPSGTGSRCHGSDGAGNADGNLSFETYDTLSLRRDLLTDYGPYGVPGLLLKVIPPFK
                     VSLTNWKDEPPLVITTAIAHDAGSQIDFTSAQFVTLDTWIRNGAAENNAPPAPAARQL
                     DPCSVALGSDPLFDPTTDPARADYLTFLGTVAPVVADKCAAGNCHGASSNALHLTCGS
                     TPEQTRWNYFALQDYVSADATSSEILRRALAPEAGGTFHEGGTVFGSRDDQAYVAIEN
                     WAKEKGGPTNVPSNAGFEFFASRVQPMLVKRGCMMLGCHSASMFHDYRLRGGSGGQFS
                     LATTRHNYELSLEQLALESPNPNASRLIAKNLAPEAGGIRHRGGALFGMGETATPCDM
                     TAAQTGPIDEQKPYCVIAAWFSEEKSERMANAKPFSGVVYVRRAPVSGPETPQDYATY
                     APGAEVIENAAALAADGTLTPGGETSLSALCGLDATRTDARRPAVSWDGQRVAFAART
                     AETDPYHVYVVSGGTCAVDAAIDAPAVNDHGDAVPPNSELLHNFDPAFAPDGRIVFAS
                     TRGNIMNTDAFSYAGPQRTPADPSRLNANLYVRDTDAKIRQLTFLNNQEFLPSFMRDG
                     RLIFTSEKRAPNFYQLAGRRMNLDGADYHPLFGQRSTIDYTQFTDVVELADKNLAFIL
                     SDKGAERSAGALAVLNRSIGIDQRSETPADYLVDPAAITTPNKPLYQHSLAIVDANAT
                     GKLSGTQGAYRNPAPLPNGNLVVSYAPTVTALDAFSGKFELDVVNPQTGVRTPFVSDA
                     TRDCLWPVAVYEKPNNGVFQSRQDEANAATSIGPGTNATVTVLDVGVLGSLLFQNTRS
                     GRDLLAIGGFSVWEDLPPPPDVTDFASGGSFVVSDAYGQVYARRQLLGNVPVFPDSSA
                     ALTLPGGVPVNLELRAKLAGDGAAVDHHQREEMQFYPGERSHQSFRRKFFNGLCGGCH
                     GSVSGSEMELAVKPDILTQASQVTARGFTPADLTGAPGAPSGPPFN"
     gene            complement(4866..5816)
                     /locus_tag="VLJ38_11670"
     CDS             complement(4866..5816)
                     /locus_tag="VLJ38_11670"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU40226.1"
                     /translation="MTSRFCNVLALATSLGFAAVSSSARADDDPSTHAGRAAVYANLQ
                     NSSLETVSTPATIRSLFDGKGNPNYAPTRVWQVLEHGEKVECLSCIPLVAGLLYDSHA
                     KTREIAAWWLRRRIFGVFGPGEVYSQVIVTLGDASQSEARRAGAANALGEFLALDGAK
                     YLATAIHNDASPSVRKAAVQALERMNSEGPKQDLADALGDSDASVRLAAVHAATRVNL
                     FTKVEAIAPLVADTDPTVRAAAAAALGTMRVKDSVDLLEMLASIENESDASVRKSAIW
                     SLGQLRDPSALATVTAAQSDPNAFVRDAAHIAAIALGGAR"
     gene            complement(5843..8179)
                     /locus_tag="VLJ38_11675"
     CDS             complement(5843..8179)
                     /locus_tag="VLJ38_11675"
                     /inference="COORDINATES: protein motif:HMM:NF037276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40227.1"
                     /translation="MPRTLVSSLPLLSLLGLVSCTGETLSPDNSKTDVSQIVYAVRQH
                     TLVDGNGNATTVDVAGGMGQVMDYGRYEPGGRLEVYDLRTFKAHNLIADLDQADITSV
                     DVSYDATRVLFTMKTKPDDKYHVYWAALSPNDDGVYERHQLTFGDYDDINAIWADQTR
                     IVFVTNQAYTPMGTRADEYNHSRVVTQLGTVTVDGGDADRKLCSQNLSHIVNLFSMSD
                     GRVGFSRWEHLENVNDVKLFAMNPDCTQMVALGGQHAKPNGGNSLVQVTESTTANVFY
                     GVVTTRENTIQAGSLFRYDARAAKDPTRIDEEKADGFKVVTPLVPVSDDPSPVGRYRS
                     PAVMPNGKLLVSWAKGVVNDQNEFSLTPPDYGIYLLDEQSGENDIVVNYTDTWELYAR
                     PVVARQPVGVPSRQDNADGTVPAIIGSVDIRQTSLTTRHGEHVSGAEFDDTTMDDAFA
                     EAVRVRIIEGFSSEAAPGATMFGLTMSEGAAILGEAKINSDGSWMAEVPPYVPMHLQP
                     VDRYDLAIRSQTTWIQGMPGERRVCGGCHEDRTANVQPAEQQVTVAAGNDPEHFNLQI
                     ADRTEFPWAYANEGHTTNEIQALLNQRCVQCHNGTTNGDKAQEFYTVSTTDVVTGETT
                     AMYMIPRLDLTDTPITVTYDRQTKTYPMSYVSLFYPAALQMEMGRDGAMIQGTVPPRW
                     AIPSDARHSKLIEKLNVTSETDPKDYAWKLGTPIEADDNGGIVAGGTHVDHAAVAGMT
                     RDELVKLVRAIDMGGQFYSRQNTAFAPFTSDPVGGGSQ"
     gene            8402..9067
                     /gene="hisIE"
                     /locus_tag="VLJ38_11680"
     CDS             8402..9067
                     /gene="hisIE"
                     /locus_tag="VLJ38_11680"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HSU40228.1"
                     /translation="MTIPDITFDSNGLVTAIAQDRATGEVRMVAWMNAEALDQTLATG
                     IATFYSRSRQKLWVKGETSGHRLRVQSVMADCDADTLLLLVDPEGASCHTGRPTCFFR
                     LVTPEGVAEPGRTALPYLFELEETVAERASATAAKSYTRSLLDGGAAKINAKIEEEAS
                     ELARAIAGESEERVASEAADVLYHVLVGLRLRGVPLRSAVEKLLARSAQSGLAEKASR
                     QSK"
     gene            9138..11312
                     /locus_tag="VLJ38_11685"
     CDS             9138..11312
                     /locus_tag="VLJ38_11685"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40229.1"
                     /translation="MLYPSEMSKKILIFESDAAFAAELRTGFSRLGCEVSVVDDATAG
                     LQQAAKDKPDLIFLAVELPRSNGFSVCNKLKRDPGLQGVPVVILSQDSTDETFEQHRR
                     LRGRAEDYIHKPIAFDALIARTGSLAGLNGSAAEESTAAAVVDDDDLLIDDLEEVPAG
                     APPLDPNANAIEVEEEVLIAAPSIAPSAPDPTSTESVNLSDAPLEIESVPIPPPPDSL
                     AGLEIESVPVPPAPDSLGGLEIESLSPAAVVGARTQDVPPSDAPAPPRPLARPPSLAP
                     ASARRPSVSPDAARLHEEIDRLKQRLREVEESERAALVRADELDESVRKGASRDAEVQ
                     RLQRELDDTKAKLASGKSQGSAREFLDLREQLNKKDKELLELRDQVTYRDKDLLALRD
                     GSLVLEREKADIADRVAELEQKMVDSQKREDAAKSDKEQAAKRAEDFRRKAEKLKSDV
                     DLLSAELASDRAGRDAELAERDARETALRADIEEAKRRGEAELEAAVAATEEQGKRVL
                     AEALEKARAEAEAERASAVENARAEARAETRSQAEQEHEAKVMALSRAQDEALAKVRA
                     EHAQSLTEIEAATARQIQEKSAELEAVRREAEERAGRIASLDQELTTERAAHGEATGR
                     LSSAEERLTRFKHELEAASNELESFRDTAHQRARAISNLEQELTRSRAAASTAEAALA
                     AEKQRSEELVGAIRTSDATLERAKDALAATLARIEEAQQNRG"
     gene            11883..>12330
                     /locus_tag="VLJ38_11690"
     CDS             11883..>12330
                     /locus_tag="VLJ38_11690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40230.1"
                     /translation="MSAGGAGAGGGGTSAGNSSLGGGAGTAGGSAGVPGGSAGAPSGS
                     AGVPSGSAGAPSGSAGAPGGSGGSGGRTAPPGQPLDPCAAPSGETCDGIDNDCNGAVD
                     DLGDFSCGIGACRRTVAACTNGVLGVCVPDVPASGAIDDCNGIDDDC"
BASE COUNT         2020 a         4170 c         4294 g         1846 t
ORIGIN      
        1 cacttcccgt gcgtccgggg agcgcaaccg gcacgccact cccggtccgt cccgcgccgc
       61 gacccggcgt gagcgccgct cccacggcga cgccgctccc actccagagc acgaacggca
      121 acggcgcgcg cgcgaacggg acgccgccgc agaacgaccc gactgcgacg cctccgaggg
      181 acgcagcgcc cgtcacgaac ggcggcgcca cggccacgcc gagtccgagt cccaccacca
      241 tcaaagccaa gctcgtcgcg ctctcgcccg gactcctcgg cgtttccacg gccatgaagg
      301 agaaggcccc gctcaagtcg tcacctgacg gcgagcgcgc gccggaatcg ggcgtcccgc
      361 actcgattcc cgacgcggag ctcttcgacg tcgatggccc cacgagctcg aagccgcccg
      421 actcggcggt gcccatcgac tcggtcgatt acgtcgaaag cctgccgccg cccgtcgcgc
      481 cggtgcaccg cagcgcagcc gtgcacaacc gcgccgccaa ccaaacgacc aagcgcatgc
      541 cgacggcgcc gcatccgccg cacgcgccgc acccacccca ccctccgcag gctaccgcca
      601 acgccagcgg cgagtctccg cgccggcgcg tgccctcggg tgatctcagc gacgatttcc
      661 tgagcacgga tctcggcttc gatgcggcgc ccgcgatcgc gccgcccgac gcgaactcgc
      721 tgttgcgcgc gcccgtttcc gtgcgtcctc caggcacatc ggcacgcccc acgtcgcaaa
      781 cctcgacgcg cgcgccggtg tcgagcccga gcaacgtcgc gcccgagagc aagagctcgg
      841 cgcgcgggat cgtgttcgtg ctcgtggcgg ccgtattcgg cacggccggc tattactgga
      901 cgcaccgcct gcaagcgccg cccgaaccag gagcgccgcc cgtcagcgcg gtcgcaacga
      961 cggaaccggc ggccacaacc actgccgaac cgacgggcaa cacgccgagt caaccgacgc
     1021 cgccggaagc gaatgctcag gccccgggcg gggaccagcc gggcgcggcg agtacgacgc
     1081 ccgcgacgac gcgcacggca cctgcggcga cggacgcgcc cacggcagct gcaggcgccg
     1141 tcgcgccgag cgaaaagtca gggaagtcgc gcgtcgagag atcgacacgc gaatcgggtt
     1201 cgagcccgag caccgcggaa agcgaagccg cgcccgcgaa gaccgaagcc gcggcccccg
     1261 aagccgcgcc cgcagcaacg agcaagacgg tcgtcgagcc gcgcggcccc gtaggcacgg
     1321 atccgttcga cgtggccgcg gcgcgcagcg cgctcgagat gtccgccgat caggcgtcga
     1381 gttgccgcaa ggacggcgat ccgagcggcg tcgccgtcgt cacgatcacg ttctcgccga
     1441 ccggccgcgt cacgacggca acgatctcgg gcccgccctt ccaagccacg cccacgggcg
     1501 gctgcattgc atcgacgatg cgccgaacgc gcgtgccgcc ctttgccggc gacatggtca
     1561 cggtgcgcaa gaccgtgacc attcaataac acgacgttta cggcgccgcg cgcaacgcac
     1621 gcgacgttta cgccgacgca acgcacgcga cgttacggcg ccgcgcgcga cggtacagcg
     1681 ccgtcagttg aacggcggcc ccgacggcgc gcccggtgca cccgtcaagt cggcgggcgt
     1741 gaagccgcgc gccgtgacct gcgacgcctg cgtcaaaata tccggcttca ccgcgagctc
     1801 catctcgctc ccgctcaccg agccgtgaca gccaccgcag agcccgttga agaatttccg
     1861 ccggaagctt tggtgggagc gttcgcccgg ataaaattgc atttcctcgc gctggtgatg
     1921 gtcgacggcg gcgccgtcac cggcgagctt ggcgcgcagc tccaggttca ccggcacgcc
     1981 gcccggcaag gtcaacgcag ccgagctgtc gggaaagacg ggcacgttgc cgagcagctg
     2041 ccggcgcgca tacacctggc cgtacgcatc gctcaccacg aagctgccgc ccgaagcgaa
     2101 atcggtaacg tcgggtgggg gcggcagatc ctcccacacg gagaagccgc cgatcgccaa
     2161 gaggtcgcgc cccgagcgcg tattttggaa caggaggctt ccgagcacgc cgacgtcgag
     2221 cacggtgacg gtcgcgttcg tccccgggcc gatggatgtg gcggcgttcg cttcgtcctg
     2281 gcgcgactgg aagacgccgt tgttcggctt ctcgtagacg gcgacgggcc acaggcagtc
     2341 gcgcgtggcg tccgagacga acggcgtgcg tacgcccgtc tgcgggttga ccacgtcgag
     2401 ctcgaatttg ccgctgaagg cgtcgagtgc ggtgaccgtc ggcgcgtagc tcaccaccag
     2461 attgccgttc ggcagcggcg ccggattgcg gtacgccccc tgcgtgccgg agagcttgcc
     2521 ggtcgcgttc gcgtcgacga tcgcgagcga gtgttggtaa aggggcttgt tcggggtcgt
     2581 gatcgccgcc ggatcgacga ggtagtcggc gggcgtctcg ctccgctgat cgatgccgat
     2641 gctgcgattg agcacggcga gcgcgccggc gctccgctcg gcccctttgt cgctcaggat
     2701 gaacgcgagg ttcttgtcgg cgagctcgac cacgtcggtg aactgcgtgt agtcgatggt
     2761 gctgcgctgg ccgaagaggg gatggtagtc ggcgccgtcg agattcatgc gccgcccggc
     2821 gagctggtaa aagttcggcg cgcgcttttc gctcgtgaaa atcaggcggc cgtcgcgcat
     2881 gaacgagggc aaaaactctt gattattgag gaacgtcagc tggcggatct tagcgtcggt
     2941 gtcgcggacg tagaggttcg cgttcaagcg cgacggatcg gcgggcgtgc gctgggggcc
     3001 cgcgtaggag aaggcgtcgg tgttcatgat gttgccgcgc gtcgacgcga agacgatgcg
     3061 gccgtcgggc gcgaaggccg ggtcgaagtt gtgcaagagc tcactgttcg gcggcaccgc
     3121 gtcgccgtga tcgttgacgg caggcgcgtc gatggcggcg tcgacggcgc acgtgccgcc
     3181 gctcacgacg tagacgtgat acgggtcggt ctccgcggtg cgcgcggcga aggcgacgcg
     3241 ctggccgtcc catgaaaccg ccggccggcg cgcatcggtc cgcgtcgcgt cgagtccgca
     3301 gagcgcgctc aagctcgtct cgccgcccgg cgtgagcgtg ccgtcggccg cgagcgccgc
     3361 agcgttctct atcacttccg cgcccggcgc gtacgtcgcg tagtcctgcg gcgtttcggg
     3421 cccgctcacg ggcgcgcgcc gcacgtagac gacacccgag aacggcttgg cgttcgccat
     3481 gcgctcgctc ttttcctccg agaaccacgc cgcgatcacg cagtagggct tctgctcgtc
     3541 gatcggaccc gtttgcgccg ccgtcatgtc gcagggcgtc gccgtctcac ccatgccgaa
     3601 gagcgcgccg ccgcgatggc gaatgccgcc cgcctcgggc gcgagatttt tcgcgatgag
     3661 ccggctcgcg ttcgggttcg gcgactcgag cgcgagctgc tcgagcgaaa gctcgtagtt
     3721 gtgacgcgtg gtcgcgaggc tgaattggcc accgctgccg ccccgcagac ggtagtcgtg
     3781 aaacatcgat gcggagtgac agccgagcat catgcacccg cgcttgacga gcatcggctg
     3841 cacgcggctc gcgaagaact cgaaccccgc gttgctcgga acgttggtag ggccgccctt
     3901 ctccttcgcc cagttttcga tcgcgacgta ggcttgatcg tcgcgtgagc cgaacaccgt
     3961 gccgccctcg tggaacgtgc cgcccgcctc gggcgcgagc gcgcgcctga ggatctcgct
     4021 cgatgtggcg tcggccgaga cgtagtcctg caaggcgaag tagttccagc gcgtttgctc
     4081 cggcgtgctg ccgcacgtga ggtggagagc gttggaggac gcaccgtggc agttacccgc
     4141 ggcgcatttg tccgccacga cgggagcgac ggttccgagg aaggtgaggt agtcggccct
     4201 ggcgggatcg gtcgtggggt cgaacagcgg atcgctgccg agcgcaaccg agcagggatc
     4261 gagctgccgc gcggccggcg cgggcggcgc gttgttctcg gcggcgccgt ttctgatcca
     4321 ggtgtcgagc gtgacgaact gagcgctcgt gaagtcgatc tgactgcccg cgtcgtgcgc
     4381 gatggccgtc gtgatgacga gcggaggctc gtccttccag ttcgtgagcg agaccttgaa
     4441 cggcgggatg accttgagca agagccccgg cacgccgtac gggccgtagt cggtgagcag
     4501 gtcgcgccgg agcgagagcg tgtcgtacgt ctcgaaagag agattgccgt cggcgttgcc
     4561 ggcgccgtcc gagccatggc agcgcgagcc ggtgccgctc ggcgtgcagc ccgacgtgtg
     4621 cagggccggc gtgattttgc ggtcgtaaaa ggtcgtctgc ccgtagtcgg cgtcgtcgcg
     4681 ctcgcagcca acggcggcga gaacgagcgc gcccacgagc actcggcgaa aagctgtcac
     4741 agagcgcatc ttagcggcac tcgcgcgctc gtgccgcgat cttgccgatg cgattgcgac
     4801 ggtcgtgagc aagcgcatgc gacgcgataa atcggcgctg gcggccgtgc gcaacctaca
     4861 gcgacctacc tcgcgccacc gagcgcgatg gccgcgatgt gagccgcgtc gcgcacgaac
     4921 gcgttcgggt cgctttgagc ggccgtgacc gtcgcgagcg cgctcgggtc gcgcagctgg
     4981 ccgagcgacc aaatagcgga ctttcgcacg ctcgcgtcgc tctcgttctc gatcgaggcg
     5041 agcatctcga gcaggtcgac cgagtctttg acgcgcatcg tgccgagcgc ggcggcggcg
     5101 gcggcgcgca ccgtcgggtc tgtgtcggcg acgagcggcg cgatcgcctc gaccttcgtg
     5161 aacaggttca cgcgcgtggc ggcgtgcacc gccgcgagcc gcaccgaggc gtcggaatcg
     5221 ccgagagcgt cggcgaggtc ctgcttcggc ccctcgctgt tcatgcgttc gagcgcttgc
     5281 accgcggctt tgcgcacgct gggggaggcg tcgttgtgaa tcgccgtcgc caggtatttc
     5341 gcgccatcga gcgccaggaa ctcaccgagc gcgttggcgg caccggcccg gcgcgcctcc
     5401 gactgcgaag cgtcgccgag cgtcacgatc acctgcgagt acacctcacc cggcccgaac
     5461 acaccgaaga tccggcgcct gagccaccac gccgcgatct cgcgcgtctt cgcgtgcgag
     5521 tcgtagagca agcctgcgac gagcggaatg caggacaagc actccacctt ctccccgtgc
     5581 tcgagcacct gccagacgcg cgtgggcgcg tagttggggt tgcctttgcc gtcgaagagc
     5641 gagcgaatcg tcgcgggcgt gctcacggtc tcgagcgaag agttctgcag gttcgcgtac
     5701 acggccgcgc gtcccgcgtg cgtgctcggg tcgtcgtcgg cgcgcgccga ggacgagacc
     5761 gccgcgaagc ccaagctcgt cgccagcgcc aaaacattac aaaatcgtga ggtcatggtc
     5821 gtatctcctc gtcctcgaag cactactgcg acccgccgcc gaccgggtca ctcgtgaaag
     5881 gtgcgaacgc cgtgttctgg cgcgagtaga actggccgcc catgtcgatg gctcggacga
     5941 gcttcacgag ctcgtcgcgt gtcatgcccg cgacggcggc gtgatcgacg tgcgtgccgc
     6001 cggcgacgat gccgccgttg tcgtccgcct cgatgggcgt gccgagcttc caggcgtagt
     6061 ccttcgggtc cgtctcggac gtgacgttga gcttctcgat cagcttgctg tgacgcgcgt
     6121 cgctcgggat cgcccagcgc ggcggcacgg tgccttggat catcgcgccg tcacgtccca
     6181 tctccatctg gagggcggcc gggtagaaga gcgagacgta cgacatcgga tacgtcttgg
     6241 tctgccggtc gtacgtgacc gtgatcggcg tatcggtgag atcgagccgc gggatcatgt
     6301 acatcgccgt cgtctcgccc gtgaccacgt ccgtggtcga taccgtgtag aattcctgag
     6361 ctttgtcgcc gttggtcgtg ccgttgtggc actgcacgca gcgttggttc aaaagcgcct
     6421 ggatctcgtt ggtggtgtgg ccctcgttcg cgtacgccca cgggaactcg gtgcggtcgg
     6481 cgatttgcag attgaaatgt tccggatcgt tgcccgcggc gaccgtgacc tgctgctcgg
     6541 cgggctggac gttcgcggtg cgatcctcgt ggcagccgcc gcacacgcgc ctctcgcccg
     6601 gcatgccttg gatccaggtc gtttggctgc gaatcgccag gtcgtagcga tcgaccggct
     6661 ggaggtgcat cgggacgtag ggcggcacct cggccatcca cgagccgtcg gagttgatct
     6721 tggcttcgcc gaggatcgcc gcgccttcgg acatcgtgag accgaacatg gtcgcgccgg
     6781 gcgccgcttc gctcgagaag ccttcgatga tgcgcacgcg caccgcttcg gcgaacgcgt
     6841 cgtccatcgt cgtatcgtcg aactcggcgc cgctcacgtg ctcgccgtgc cgcgtcgtga
     6901 gcgacgtttg ccggatatcc acggaaccga tgatggccgg caccgtaccg tccgcgttgt
     6961 cctgccgcga cggcacgccg acgggctgac gcgccacgac gggccgcgcg taaagctccc
     7021 aggtgtccgt gtagttcacc acgatatcgt tttcgccgct ctgctcgtcg agtaggtaaa
     7081 tgccgtagtc gggcggcgtg aggctgaact cgttctgatc gttgacgacg cccttggccc
     7141 acgaaacgag cagcttcccg ttcggcatca cggcgggcga ccggtagcga ccgaccggcg
     7201 acggatcgtc gctcacgggc acgagcggag tgacgacctt gaagccgtcc gccttctctt
     7261 cgtcgatgcg cgtcggatcc ttcgcggcgc gcgcgtcgta acggaagagc gaccccgcct
     7321 gaatcgtatt ttcgcgcgtc gtgacgacgc cgtaaaagac gttcgcggtc gtgctctccg
     7381 tcacctgcac gagcgagttg ccgccgttgg gcttcgcgtg ctggcctccg agcgcgacca
     7441 tctgcgtgca gtcggggttc atggcaaaga gcttcacgtc gttgacgttc tcgaggtgct
     7501 cccagcgcga gaagccgacg cgcccgtccg acatgctgaa caggttgacg atgtgcgaca
     7561 gattctgcga gcacagcttg cgatcggcgt caccgccgtc gaccgtgacg gtgccgagct
     7621 gcgtgacgac gcgcgaatgg ttgtactcgt cggcgcgcgt gcccatcggc gtgtacgcct
     7681 ggttcgtcac gaacacgatg cgggtctggt ccgcccagat cgcgttgatg tcgtcgtaat
     7741 cgccgaaggt gagttggtgc cgctcgtaga cgccgtcgtc gttcggcgag agagccgccc
     7801 agtagacgtg gtacttgtcg tccggcttcg tcttcatcgt gaagaggacg cgcgtcgcgt
     7861 cgtagctcac atcgacgctc gtgatgtcgg cttgatcgag atcggcgatc aggttgtgcg
     7921 ccttgaaggt cctgaggtcg taaacctcga ggcgaccacc cggctcgtag cgcccgtagt
     7981 ccatcacctg gcccatgccg ccggccacgt cgacggtcgt cgcgttgccg ttgccgtcca
     8041 ccagcgtgtg ttggcggacg gcgtagacga tctgcgaaac gtcggtcttg ctgttgtctg
     8101 gcgacagggt ttcacccgtg caggacacga gaccgagtag cgacagaagc ggtagcgagc
     8161 tgacgagcgt tcgcggcatg aagactcctt cggcccagga cggcctcctg gggcaaccgc
     8221 agtgatgcag tttacgcacc aaccaaagaa acacgcattt tcaataactt agcgcggttc
     8281 gtcgggggcc cgcacccacc ctgcggccca aacaaggggg ccgctacccc cgaagcatcc
     8341 gctaaaatcc ctcggccggt gccggcacgc gtcccgatcc gtgccacaaa tcccgcctcc
     8401 cttgaccatc cccgacatca ccttcgactc gaacggcctc gtcacggcca tcgctcaaga
     8461 ccgcgccacc ggcgaagtcc gcatggtcgc ctggatgaac gccgaagcgc tcgaccaaac
     8521 gctcgccacg ggaatcgcga cgttttacag ccgatcgcgc caaaagctct gggtcaaggg
     8581 ggagacgagc ggacaccgcc tgcgcgttca gtcggtcatg gccgactgcg atgccgacac
     8641 gctcctcctc ctcgtcgatc cggagggcgc gtcctgtcac acgggtcgcc cgacctgctt
     8701 cttccggctc gtcacgcccg aaggcgtcgc cgagccgggt cgcacggcac ttccgtatct
     8761 gttcgagctc gaggaaacgg tggccgagcg cgcctccgcg acggccgcca aaagctacac
     8821 gcgctcactg ctcgacggcg gcgccgccaa gatcaacgcg aagatcgagg aggaagcgtc
     8881 cgagctcgcc cgcgccatcg ccggcgaaag cgaggaacgc gtggcgagcg aggcggcgga
     8941 cgtgctttat cacgtgctcg tggggctcag gctccgcggc gtgccgctcc gttcggccgt
     9001 agaaaagctg ctcgcgcgct ccgcgcagtc ggggctcgcc gagaaggctt cgcgccaaag
     9061 taaataaagg tgggagtccc gaggtcggcc ggcggaatac tcgcttcgtt tgaccctact
     9121 cggcggagcc ggctatcgtg ctctacccgt ccgagatgtc gaagaaaatc ctgatcttcg
     9181 agagcgacgc cgctttcgcc gccgagctgc gaacgggctt ttcacgcctc ggctgcgagg
     9241 tatcggtcgt ggacgacgcc acggccggcc tgcagcaagc ggccaaagac aagcccgacc
     9301 ttattttctt ggccgtcgag ctcccgcgta gcaacggctt ctcggtctgc aacaagctca
     9361 agcgcgaccc ggggctgcaa ggggtccccg tcgtgatcct gagccaggac tcgaccgacg
     9421 agacgttcga acagcaccgg cgcctgcgcg ggcgcgccga agactacatc cacaaaccca
     9481 tcgcgttcga cgcgctcatc gcgcgcacgg gaagcctggc gggactgaac ggcagcgccg
     9541 ccgaggagag caccgccgcc gccgtcgtcg acgacgacga cctcttgatc gacgatctcg
     9601 aggaggtccc ggcaggcgcg ccgcccctcg atccgaacgc caacgcgatc gaggtggaag
     9661 aggaagtcct catcgcggcg ccgagcatcg cgccgagcgc gccggacccg acgagcacgg
     9721 agagcgtgaa cctgtcggac gcgccactcg aaatcgaaag cgtgccgata ccgccgccgc
     9781 ctgacagcct ggccggtctc gaaatcgaga gcgtgccggt gccgccagcg ccagacagcc
     9841 tgggcggcct cgaaatcgag agcctttccc cggctgccgt cgtcggcgcg cgcacccaag
     9901 acgtgccacc gagcgacgcc ccagcgccgc cgcgccccct ggcgcgccca ccttcgctcg
     9961 ctcccgcctc ggcgcggcgc ccgtcggtga gcccggacgc tgcccgcctg cacgaagaga
    10021 tcgatcgcct gaagcagcgt ctgcgcgagg tggaagagag cgaacgcgcc gcgctcgtcc
    10081 gcgccgacga gctcgacgaa tccgtgcgca agggcgcgtc gcgcgacgcc gaagtccagc
    10141 gcttgcagcg cgagctcgac gacacgaagg cgaagcttgc ctccggcaag tcgcaaggct
    10201 cggcgcgtga gtttctcgat ttacgcgagc agctcaacaa gaaggacaag gagctgctcg
    10261 agctgcgcga tcaggtcacc tatcgcgaca aggatttgct cgcgctccgg gacggctcgc
    10321 tcgtgctcga gcgcgagaag gccgacatcg ccgatcgcgt cgccgagctc gagcaaaaga
    10381 tggtcgactc gcaaaaacgc gaggacgcgg ccaagagcga caaggagcag gccgccaagc
    10441 gcgccgaaga tttccggcga aaggccgaga agctcaagag cgacgtcgac ctgttgtctg
    10501 ccgagctcgc gagcgaccgt gccggacgcg acgccgagct cgccgagcgc gacgcgcgcg
    10561 agacggcgct ccgcgccgac atcgaagagg ccaagcgacg tggcgaagcc gagctcgaag
    10621 ctgcggtggc cgcgaccgaa gagcaaggca agcgtgtgct cgccgaagcg ctcgagaaag
    10681 cgcgcgccga ggccgaggcc gagcgggcca gcgccgtcga gaacgcacgc gccgaggcgc
    10741 gtgccgagac gcgcagccaa gccgagcaag agcacgaagc caaggtgatg gcgctgagcc
    10801 gcgcgcaaga cgaagcgctc gccaaggtgc gcgccgagca cgcgcagtca ctcaccgaaa
    10861 tcgaggccgc gacggcgcgc caaatccaag agaagtcggc cgagctcgag gccgtgcggc
    10921 gtgaagccga ggagcgcgcc ggccgcatcg cctcgctcga ccaagagctc acgaccgaac
    10981 gcgccgcgca cggcgaggcc accggccgct tgagctccgc cgaagaacgc ctcacgcgct
    11041 tcaagcacga gctcgaagcc gcgtcgaacg agctcgaatc cttccgcgac acggcgcacc
    11101 agcgcgcgcg cgccatctcg aacctcgagc aagagctcac gcgcagccgc gccgcggcgt
    11161 cgacggccga ggccgcgctg gccgccgaaa agcagcgcag cgaagagctc gtgggagcca
    11221 tccgcacgag cgacgccacg ctcgagcgcg ccaaggacgc gctcgccgca acgctcgcgc
    11281 ggatcgaaga agcgcagcag aaccgggggt aacgccagcg cgcgcgtgaa tgctcctggc
    11341 ttcgggttga acgtcttcgg agcagcggca actaactggt cgccatgtgg acgcgccgtg
    11401 ggcttggagt cgggaggttg ggtaccgggg ggccgctcgt cttggctggt gcgctgctcg
    11461 ctagcgtcct cgctgcaggc tgcgggaagg actcgcatcc ccggccgagt ggtggaggag
    11521 cgcagagtgc cgggcacggc ggctattcgg ggcaacaggc gagccgcgct ggacgggccg
    11581 ggcacgggac cacgctggag gcgggcgcgg gtggtcgttc ggacggagga agctcgggct
    11641 ccaacgacgc gggcgcggag gacaatggag gcagtgaacg tggcatcgga ggaacggcgg
    11701 tcgctggcgg gtcccacgga ggcgcgccgg gcagcggcgg gaacggagcg ggacgcggcg
    11761 ggagcggcgc ggtaaatgac gagacgggag gagcggcggg cgaaagtgga gaagcgggaa
    11821 cgggtgtgag tggtgcgttc gcggtgggtg gccgcggagg tacggctggt gagggggcgg
    11881 gagtgtccgc gggcggtgcg ggtgcgggag gcggcggaac gtcagcgggc aacagctcgc
    11941 taggcggcgg cgcgggcacc gctggtggca gcgccggtgt gccgggtggc agtgccggtg
    12001 cgccgagtgg cagcgccggt gtgccgagtg gcagtgccgg tgcgccgagt ggcagcgccg
    12061 gcgcgccggg cggctcgggt ggttcagggg gtcgcactgc accgccaggg caaccgctcg
    12121 atccgtgcgc ggccccgagc ggcgaaacgt gtgacggcat cgacaacgat tgcaacggcg
    12181 cggtcgacga ccttggcgac ttcagctgcg gcatcggcgc gtgccgccgc accgtggcgg
    12241 catgcacgaa cggcgtgctc ggggtgtgcg tgcctgacgt ccccgccagc ggcgccatcg
    12301 acgactgcaa cggcatcgac gacgactgcg
//
LOCUS       DATIML010000681         1560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_139408, whole genome shotgun sequence.
ACCESSION   DATIML010000681 DATIML010000000
VERSION     DATIML010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139408"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..540)
                     /gene="purE"
                     /locus_tag="VLJ38_11695"
     CDS             complement(22..540)
                     /gene="purE"
                     /locus_tag="VLJ38_11695"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HSU40231.1"
                     /translation="MAKVRAEKQSEPPLVGVIMGSMSDWETMRHTSETLEELGVPHEV
                     RVVSAHRTPELMFEYAGSAAERGLEVIIAGAGGAAHLPGMVAARTWVPVLGVPVESHA
                     LRGMDSLLSIVQMPAGVPVGTLAIGRAGAINAALLAAAIVARGRPKLALRLERYRAER
                     KQRVLDEPSPRS"
     gene            689..>1560
                     /locus_tag="VLJ38_11700"
     CDS             689..>1560
                     /locus_tag="VLJ38_11700"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: protein motif:HMM:NF016169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HSU40232.1"
                     /translation="MTFHVHQSNRVERLVTLLARQLERPRGGAFEQEAVVVPGRGMGV
                     WLSMELSKRLGVWATPLIYPRALVEDVARRALGQNALGPEPLSEELMEWAIRALLPGL
                     LDEPDFAGLKRYLARDPLGVRLSELSERLATVFDQYLTYRPEWARVWAGGGLLNVGPE
                     DRFQPLLFRRLSERLRCRHVGELEPLLLERLADSRPLALPPRVSVLGVSTLPPLFVRV
                     LVALARHVDVHFFLFAPSPSLAVDGGARPLLAGLGQVGRELDDVLRATLEAQGVAAEW
                     HDEFEPPRADTLLGA"
BASE COUNT          196 a          539 c          565 g          260 t
ORIGIN      
        1 ccgacgcgcc ggagccggcg ctcagcttcg ggggctgggt tcgtcgagga cacgttgttt
       61 gcgctccgcg cggtagcgct cgagccttag cgcgagcttc ggccggcccc gcgcgacgat
      121 cgcggcggcg agtagcgccg cgttgatcgc gccggcgcgc ccgatcgcga gcgtgcccac
      181 cggaacaccc gccggcattt gcacgatcga caaaagcgag tccatgccgc gcagggcgtg
      241 gctctcgacc ggcacgccga gcaccggcac ccacgtcctg gccgcgacca tgcccggcaa
      301 gtgcgcggca ccgccggccc ccgcgatgat cacctcgagc ccgcgctcgg ccgcgctgcc
      361 tgcgtattcg aacatgagct cgggcgtgcg gtgcgccgac accacgcgca cctcgtgcgg
      421 cacgccgagc tcttcgagcg tctcggacgt gtggcgcatc gtctcccaat cgctcatcga
      481 gcccatgatg acgcccacga gcggcggctc actctgcttt tcggctcgca cctttgccac
      541 gacggaaggg cggggacttt agtgagtttc gcctggcgcg caagcgtccg cgcacaatgg
      601 ccggcgctcg tgacaaccaa tgtcagagct cggggcttct ggccttgagg cgagcggcga
      661 gcgtgcgtag atccccggag catcgccgat gaccttccac gtgcaccaga gtaaccgggt
      721 cgagcgcctc gtgacgctgc tcgcccggca actcgagcgg ccgcgcggcg gcgcgttcga
      781 gcaggaggcc gtggtcgtgc cgggacgcgg catgggcgtc tggctttcga tggagctctc
      841 gaaacggctc ggcgtgtggg caacgccgct gatttacccg cgcgctctcg tggaggacgt
      901 ggcacggcgg gcgcttggcc aaaacgcact cggtccggag cccctcagcg aggagctcat
      961 ggagtgggcg attcgcgcgc tcctgccggg actgctcgac gagccggact ttgcggggct
     1021 caagcgctac ctcgcgcgcg atccgttggg cgtgcggctg agcgagctct ccgagcggct
     1081 ggcgaccgtg ttcgatcagt acctgacgta tcgaccggag tgggcgcgcg tctgggcggg
     1141 tggcggcttg ctcaacgtgg ggcccgagga tcgcttccag ccgcttttgt tccggcgctt
     1201 gagcgaacgg ttgcgctgcc ggcacgtggg ggagctcgag ccgctcctgc tggaacgctt
     1261 ggccgattcg cggccgctcg cgctgccgcc gcgcgtttca gtgctcgggg tttcgacgct
     1321 gccgccgctg ttcgtgcggg tgctcgtggc gctcgctcgg cacgtcgatg tgcatttctt
     1381 cttgtttgcg ccgtcgccgt cgctcgccgt ggacggcggc gcgcgaccgc tgctcgccgg
     1441 tctcggccaa gtggggcgcg agctcgacga cgtcctgcgc gcgacgctcg aagcgcaggg
     1501 tgtcgcggcc gagtggcacg acgagttcga gccgccgcgc gcggacacgc tgctcggggc
//
LOCUS       DATIML010000682         2556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_139797, whole genome shotgun sequence.
ACCESSION   DATIML010000682 DATIML010000000
VERSION     DATIML010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139797"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1238)
                     /gene="dapE"
                     /locus_tag="VLJ38_11705"
     CDS             complement(<1..1238)
                     /gene="dapE"
                     /locus_tag="VLJ38_11705"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HSU40233.1"
                     /translation="MSRTDLTQTLLWLCRIPSPIGEEKELCDAVSERIGQVPLAGAIR
                     RYGHSIVVPLVRGTGKAHVVLAGHLDVVRTVHDAPARIEGDKLYGAGAADMKSGLALM
                     LELAERPERPAVDVTLVFYAREEGPFAENELGPVLAQDPDVKRADLAIALEPSDNKLQ
                     LGCGGSLHATVTFHGRTAHSARPWQGENAIHKAAALLARLGALAPVTETVDGLEWKNV
                     ISATMASGGRARNIIPDRFELNLNHRFGPETSVEVAKGNIERLVAGEAEVSFPDLAPS
                     APPSRNHPLVRALAASGVLAIEPKQAWTDVARFHAAGVPAANFGPGTQAQAHQRNEWT
                     HLPELEVGRAILERFFEKIAALGVLALVLASLGTTACESTTGATERRTDAVANPAPAA
                     PSYLERAQVKRWLPALLQRLR"
     gene            complement(1277..2101)
                     /locus_tag="VLJ38_11710"
     CDS             complement(1277..2101)
                     /locus_tag="VLJ38_11710"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HSU40234.1"
                     /translation="MQDAELEAAITAAFADRTLLAKAEVKAAVEEVIRRLDTGALRVV
                     EPEAPGKYRTLAWVKQAILLYFAIRPMQKLEAPPFEFYDKIPLKRGLEEAGVRVVPPG
                     TVRYGAFVERGAIVMPGYVNIGAWVGAGTMVDTWATVGSCAQIGRDCHLSGGVGIGGV
                     LEPPGAQPVIVEDGCFIGSRAIIVEGVIVEREAVIGAGVALTASTAILDVTGSEPIET
                     RGRIPPRSVVIPGTRTKRFPAGEFQIPCALIIGRRSESTDKKTSLNAALRDFAVAV"
     gene            complement(2163..>2556)
                     /locus_tag="VLJ38_11715"
     CDS             complement(2163..>2556)
                     /locus_tag="VLJ38_11715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40235.1"
                     /translation="PFPFKVPDLLRQRLPASPSGRRPARRFTARLSLTEPLPEVLLKP
                     RAFSTLIGAAAELLSDPNGVPGISIAVQSGTLEVYVSGSAAAGSELVVWGYGVIGPSA
                     AAIGAAAELSGVEFSAGEGGMLFGVRTS"
BASE COUNT          384 a          840 c          924 g          408 t
ORIGIN      
        1 cgcagccgct gcaagagcgc cggaagccag cgcttcactt gcgcgcgctc gaggtacgag
       61 ggcgccgccg gtgccggatt cgcgacggcg tcggtgcggc gttcggtcgc gccggtcgtg
      121 ctctcgcaag ccgtcgtccc gaggctcgcg agcacgagcg cgagcacgcc gagcgcggcg
      181 atcttctcga agaagcgctc gaggatcgcg cgtcccactt cgagctccgg caggtgcgtc
      241 cactcgttac gttggtgcgc ctgggcttgc gtaccggggc cgaaattcgc ggcaggcacg
      301 cccgcggcat ggaagcgagc cacgtccgtc cacgcctgct tcggctcgat cgcgagcacg
      361 ccgctcgccg cgagcgccct gacgagcgga tgattgcgcg acggtggcgc cgagggcgcc
      421 agatcgggga agctcacttc ggcctcaccc gcgacgagtc gttcgatgtt gcccttcgcg
      481 acctccacgg acgtttcggg tccgaagcgg tggttgaggt tcagctcgaa gcgatcgggg
      541 atgatgttgc gcgcccggcc gccgctcgcc atcgtcgcgc tgatgacgtt cttccactcg
      601 agtccgtcga cggtttcggt cacgggcgcg agcgccccca agcgcgcgag cagggccgcc
      661 gccttgtgaa tcgcgttttc gccctgccag gggcgcgcgc tgtgggccgt ccggccatgg
      721 aacgtcaccg tggcatgcag cgagccgccg cagccgagct ggagcttgtt gtcgctcggc
      781 tcgagcgcga tcgcgagatc ggcacgtttt acgtcgggat cttgcgcgag cacggggccg
      841 agctcgtttt cggcgaaggg gccctcctca cgcgcgtaaa agacgagcgt cacgtcaacg
      901 gcggggcgct cggggcgctc ggcgagctcg agcatgagcg cgaggccgct cttcatgtcc
      961 gccgcgcccg cgccgtagag cttgtcccct tcgatgcggg ccggcgcgtc gtgcacggtg
     1021 cgcacgacgt ccaggtggcc ggcgagcacg acgtgcgcct tgccggtccc gcgcacgagc
     1081 ggcacgacga tcgagtggcc gtaacggcga atcgcgcccg cgagcgggac ctgtccgatg
     1141 cgctcgctca cggcgtcgca gagctccttc tcctcgccga tgggggaggg gatacggcag
     1201 agccagagca gcgtttgagt gaggtcggtc ctggacatcg gatttgcgtg gcgtacttgg
     1261 tgatggccga ggcccgtcag acggcgacgg cgaagtcgcg gagcgccgcg ttcaagctcg
     1321 ttttcttgtc ggtgctctcg ctgcgccggc cgatgatgag cgcgcacggg atctgaaatt
     1381 cacccgcggg aaagcgtttg gtgcgcgtgc cggggatgac gacgctgcgc ggcggaatgc
     1441 gtccccgtgt ttcgatgggt tcgctgccgg tcacgtcgag gatcgcggtg gaagcggtga
     1501 gcgcgacgcc tgcgccgatc acggcctcgc gttcgacgat tacgccctcg acgatgatgg
     1561 cacgcgagcc gatgaagcag ccgtcctcga cgatgacggg ttgcgctccc ggcggctcga
     1621 gcacgccccc gatgccgaca ccgcccgaga ggtggcagtc gcggccgatc tgagcgcagg
     1681 agccgacggt cgcccaggta tcgaccatcg tgccggcgcc gacccaggcg ccgatgttca
     1741 cgtagccggg catcacgatc gcgccccttt cgacgaaggc gccgtagcgc accgtgcccg
     1801 gtggcacgac acgcaccccc gcttcttcga gcccgcgctt gagcgggatc ttgtcgtaaa
     1861 actcgaaggg cggcgcctcg agcttttgca tgggccggat cgcaaagtag aggagaatcg
     1921 cctgcttcac ccaagcgagc gttcggtact tgcctggcgc ctcgggctcg acgacgcgga
     1981 gcgcgcccgt gtcgagccgg cgtatcacct cctcgacggc ggctttgact tcggctttgg
     2041 cgaggagcgt gcgatcggcg aaggcagccg tgatggcagc ttcgagctcg gcgtcttgca
     2101 tggtaagacg cgaatatagc gcgacttcgg cgccggcagc ccgcgccgtg aggatggtgc
     2161 gttcagctcg tgcggacgcc gaacagcatg ccgccttcgc cggcggaaaa ttcgacgccg
     2221 gaaagttccg cggcggcacc gatcgcggcc gcgctagggc caatcacgcc gtagccccag
     2281 acgacgagct ccgacccggc cgcggccgag cccgagacgt agacttcgag ggtgccgctt
     2341 tgaaccgcga tgctgatacc gggcacgccg ttcggatcgc tcaagagctc ggcggcggcg
     2401 ccgatcaagg tcgagaaggc gcggggcttg agcagcactt ctgggagcgg ttccgtgagc
     2461 gatagacgcg cggtaaagcg gcgcgcggga cggcgtccgc tcggggaggc cggtaatcgc
     2521 tggcgcaaca gatcggggac cttgaaggga aacggc
//
LOCUS       DATIML010000683         2263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_428949, whole genome shotgun sequence.
ACCESSION   DATIML010000683 DATIML010000000
VERSION     DATIML010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428949"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..668
                     /locus_tag="VLJ38_11720"
     CDS             <1..668
                     /locus_tag="VLJ38_11720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40236.1"
                     /translation="VSATDVATAAAPSSVTAPAPVTSPAAAASPASVAVEHRTAASSR
                     RTEPVAGPPPSGFVSAFVTVGTGLDSGPARRGGGLWAARSLAPLPLWIPVSVVYTWRP
                     REGSLKVDWLTLRAGLGNVWSFAGGRVELEAEAFIALEQLTATATHPTTGRQDSEQRW
                     APFLGVGAGPVFALLPPLGLAIEARVGKSLRTFRVYDAGREVARTSLWDAAVEVGPLL
                     TFR"
     gene            732..1406
                     /locus_tag="VLJ38_11725"
     CDS             732..1406
                     /locus_tag="VLJ38_11725"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU40237.1"
                     /translation="MRMASLPARDSRPHLRLVPGGTERAAEPVSDEELIAAFVRGDRG
                     VAEELYDRLIHVVEATLFRILGRRGDDHEDLVQSAFEQIMLTLVRKRFAGACSLRAWA
                     ATVTSHLALNVIRTRTRDRRWLAREGTCGSELERARAPVDVERQAAVRDELERVRRIL
                     ATMKPERASALVLHDVLGHELAEIAVLTGVSVSAAQSRLFRARAELEAKLEAELEACR
                     SGEGES"
     gene            1403..>2263
                     /locus_tag="VLJ38_11730"
     CDS             1403..>2263
                     /locus_tag="VLJ38_11730"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HSU40238.1"
                     /translation="MTRAPTAAERALAAMREQRLPEDSELAKGAQRRRMVARVEGFQA
                     GLLRDDRRRRRVVPWLATGLMLAAAAAVALGSALKAPAPLSSAVPAARAELAPAKLVA
                     ERGAVDFVRQRRAGSPSRGELFPGDEVRTREDGGVTLLLALGAKVELGPSTAVELSNP
                     GPPAGKSESVRLVRGRIELSVPKQPDGASFSVTAPLAKVVVLGTEFSVTASEHGPTMV
                     EVKQGRVLVEHGSGSTFLDAGATWTSERPFEPGATASAAASAVSSVRQVDSALTSAVE
                     ALREVRPLASA"
BASE COUNT          308 a          784 c          811 g          360 t
ORIGIN      
        1 cggtttccgc gaccgacgtt gcgacggctg cggcaccctc gagcgtgacg gctccggctc
       61 ccgtcacatc acctgccgcg gccgcgagtc cagcatccgt cgccgtcgaa caccgaacgg
      121 cagcttcttc gcgccgcacc gaacccgtcg ccgggccgcc cccgagcggc ttcgtgagcg
      181 ccttcgtcac cgtcggcacc gggctcgaca gcggtcccgc gcggcgcggc ggcggcttgt
      241 gggcggcgcg ctcactcgcg ccgttgccgc tctggatccc cgtgagcgtc gtctacacgt
      301 ggcgaccgcg cgagggatcg ctgaaggtcg actggctcac gctacgcgcc ggcctcggca
      361 acgtatggtc gttcgcgggc ggccgcgtcg agctcgaggc agaagcgttc attgcgctcg
      421 agcagctcac ggccacggcg acgcatccga cgaccgggcg tcaggactcc gagcagcgtt
      481 gggcgccttt cttgggcgtc ggcgccggac ccgttttcgc cctgctgccg ccgctcggcc
      541 tcgcgatcga ggcacgcgtc ggcaaatcct tgcgtacgtt ccgggtgtac gacgcgggac
      601 gggaggttgc tcgcacgtcg ctttgggacg ccgccgtcga ggtcggacct ttgctcacgt
      661 ttcgatgaag tgagcgcgac ggtgcgcatg caaagagcag catggccgcg gggcgctgcg
      721 ttaccttaat catgcgtatg gcttctttgc cggcccgtga ctcgcgtccc cacttgcggc
      781 tagtgccggg tggaaccgag cgcgccgccg agcccgtctc ggacgaagaa ctgatcgcgg
      841 cgttcgtgcg cggtgatcgg ggcgtcgccg aggagctgta cgaccggctg atccacgtcg
      901 tggaagcgac gctgtttcgc attctcggtc gccgcggtga cgaccacgaa gatctcgtgc
      961 agtctgcgtt cgagcagatc atgctgacgc tcgtgcgcaa gcgctttgcc ggcgcgtgca
     1021 gcttgcgggc ctgggcggcc acggtcacga gccatctcgc gctcaacgtg atccgtacgc
     1081 gaactcgtga tcgccgctgg ctcgcgcgcg aggggacgtg cggctcggag ctcgagcgtg
     1141 ctcgagctcc cgtcgacgtc gagcgacagg ccgcggtgcg cgacgagctc gagcgcgtgc
     1201 ggcgcatcct cgcgaccatg aaaccggagc gagcgagcgc actcgtgctc cacgacgtgc
     1261 tcggtcacga gctcgccgaa attgccgtcc tcaccggtgt ctccgtctcg gccgcgcagt
     1321 cgcgcctgtt tcgtgcgcgt gccgagctcg aagcgaagct cgaagcggag ctcgaagcct
     1381 gccgcagcgg ggagggcgag tcgtgacacg cgcaccgacc gccgccgagc gtgctctcgc
     1441 tgcgatgcgc gagcagcgcc tacccgaaga cagcgagctc gcgaaaggcg ctcagcgccg
     1501 ccgcatggtg gctcgggtcg aaggcttcca agcgggcctc ttgcgtgatg atcggcgtcg
     1561 gcgccgcgtc gtgccctggc tcgcgacggg gctcatgctg gccgcagctg cggcagtcgc
     1621 gctcggctcc gcgctgaaag cgccagcgcc cttgtcgagc gccgtgcccg cggcgcgagc
     1681 cgaactcgcg cccgccaagc tcgtcgcaga acgcggtgcg gtggacttcg tgaggcaacg
     1741 gcgcgcgggc tcgccgtccc gtggagagct ctttccaggt gacgaggttc gcacgcgcga
     1801 ggacggcggg gtcacgctgc tgctcgcgct cggcgccaag gtcgagctcg gcccgagcac
     1861 ggccgtcgag ctgtcgaatc cgggcccgcc ggcgggcaaa tccgaatcgg tgcgcctcgt
     1921 tcgcggtcgt atcgagctca gcgtacccaa gcagccggac ggggcttcgt tctccgtcac
     1981 ggcgccgctc gccaaagtcg tggtgctcgg cacggagttc tcggtcacgg catccgagca
     2041 cgggccgacg atggtcgagg tgaagcaagg ccgcgtcctc gtcgagcacg ggtcgggcag
     2101 cacgttcttg gacgccggcg cgacatggac ctccgagcga ccgttcgagc caggcgccac
     2161 ggcgagcgct gcggcgagcg ccgtgagtag cgtcaggcaa gtggattccg cgctcacctc
     2221 ggccgtcgag gctttgcgcg aggtgcggcc gctggcgagc gca
//
LOCUS       DATIML010000684         2095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1298832, whole genome shotgun sequence.
ACCESSION   DATIML010000684 DATIML010000000
VERSION     DATIML010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298832"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1099)
                     /gene="lgt"
                     /locus_tag="VLJ38_11735"
     CDS             complement(<1..1099)
                     /gene="lgt"
                     /locus_tag="VLJ38_11735"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HSU40239.1"
                     /translation="MSLLPSIDWDLDPVFVSVPQAAVVGIAGAIALYSFFQALRHKGG
                     DNTSTGILFALLAFVAYRYMERGLELRYYSMLFVVVFLGGYGLLKWQIERGGGPAEDA
                     GDFIVYGVLGVLLGARLGHVLFYDLKKAIDDPAWIFKIWTGGLASHGAVIGLILAMYL
                     FTRRRGIPFIEGSDRFAFSAALGAALVRLGNLLNSEIVGRIVPDQSWGFRFKRYAEDI
                     REVELGHLPQIPLRYPTQLAEMFLGFGVLGALYLFDRALGREKRPRGALISLFFLLYF
                     SGRFCVEFYKEFEGNGGKPLGLPIDMGQVLSLPGILIGVVGLYLSFKKRIPVGWPHGE
                     SLARDEDDEEEPAPKKRKRKPVAAAVAEDEDE"
     gene            complement(1116..1853)
                     /locus_tag="VLJ38_11740"
     CDS             complement(1116..1853)
                     /locus_tag="VLJ38_11740"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HSU40240.1"
                     /translation="MSLIEITRELRRSMQKLRFAEPVSYVYCPLDYAWDAHAAYLERW
                     GKGKKQVVFLGMNPGPFGMVQTGVPFGDVTFVRDWLGVSGKIKKPTREHPARPVLGFE
                     CARGEVSGQRLWGWARETFGEPERFFERFFVVNYCPLAFVEESGRNRTPDKLPKGEQA
                     PLFAACDRALSRIIDELQPEHVIGVGAFAEARARRVLAESGVRVGTILHPSPASPRAN
                     QGWARIASEELRQSGIILPPSSPSPGS"
BASE COUNT          421 a          679 c          670 g          325 t
ORIGIN      
        1 cttcgtcttc gtcttccgcg acggccgcgg cgaccggctt gcgcttgcgc ttcttcggcg
       61 caggctcttc ctcgtcgtct tcgtcgcgcg cgaggctctc gccgtgcggc catcccaccg
      121 ggatgcgctt cttgaacgag aggtataggc cgacgacacc gatgaggatg cccggcaagc
      181 tcaagacttg ccccatgtcg atcggcagcc cgagcggctt gccgccgttg ccctcgaact
      241 ccttgtaaaa ctcgacgcag aagcggccgc tgaagtagag caggaagaac agcgagatga
      301 gcgcgccgcg cggccgcttt tcgcggccga gcgcgcggtc gaagagatag agcgcgccga
      361 gcacgccgaa accgaggaac atttcggcga gctgcgtcgg gtagcgcagt gggatttggg
      421 gcaagtggcc gagctcgact tcacggatgt cctcggcgta gcgcttgaag cggaaacccc
      481 acgactgatc gggaacgatg cgaccgacga tttccgagtt gagcaggttg ccgaggcgta
      541 cgagcgccgc accgagcgcc gccgaaaacg cgaagcgatc ggagccctcg atgaacggaa
      601 tgccgcgccg ccgcgtgaac aggtacatcg cgaggatgag cccgatcacg gcgccgtggc
      661 tcgcgaggcc gcccgtccag atcttgaaga tccacgcggg atcgtcgatc gccttcttca
      721 aatcgtaaaa gaggacgtgg cccaagcgcg cgccgagcag cacgccgagc acgccataaa
      781 cgatgaagtc gcccgcgtct tcggccggac cgccgccgcg ctcgatttgc cacttcaaga
      841 gcccgtagcc gccgagaaag acgacgacga agagcatgct gtagtagcga agctcgagcc
      901 cgcgctccat gtacctgtaa gcgacgaacg cgagcagcgc gaacaggatg ccggtcgagg
      961 tgttgtcgcc gcccttgtgg cgcagggcct gaaagaagct gtaaagagcg atggcgcccg
     1021 cgatgccgac gaccgctgct tgcggcaccg agacgaagac gggatcgaga tcccaatcga
     1081 tggacggcag aagcgacatg gggccccgaa ctacatcaag agcccgggct tggcgaggac
     1141 ggcggcaaaa tgatgccact ttgtcgcagc tcttcgctcg cgatgcgtgc ccaaccctgg
     1201 ttggcccgcg ggcttgccgg gctcgggtgc aaaatagtgc cgactcgtac gccgctctcc
     1261 gcgagcactc gccgcgcgcg cgcctcggcg aacgcaccaa cgccgatcac gtgctccggc
     1321 tggagctcgt cgatgatgcg cgacaacgcg cgatcgcacg ccgcgaagag cggcgcctgt
     1381 tcgcctttcg gtagcttgtc gggcgtgcga tttctgcccg actcctcgac gaacgcgagc
     1441 ggacaataat tgacgacgaa gaagcgttcg aaaaaccgct cgggctcgcc gaacgtctcg
     1501 cgcgcccagc cccagagacg ctggccgctc acttcgccgc gcgcacactc gaacccgagc
     1561 acggggcgcg ctggatgctc gcgcgtgggc tttttgatct tgccgctcac tccgagccaa
     1621 tcgcgaacga acgtcacgtc gccgaacggc acgcccgtct gcaccatgcc gaacggaccc
     1681 ggattcatgc ccaggaagac gacctgcttc ttccctttgc cccagcgctc gaggtacgcg
     1741 gcgtgcgcgt cccacgcgta gtcgagcggg cagtacacgt aggagacggg ctcggcgaag
     1801 cggagcttct gcatggagcg gcgaagctcg cgggtgatct caatcaggga cacgccggca
     1861 agcttagcca agccgccgcc gctgctcgaa aacacgcgta tttacgcaaa aaatcgcgca
     1921 ctctctccgc gtgtacccga catcggccca caggcgcgaa cgtaggagag tgtcccacaa
     1981 aaaagtgact attggcattt tcagggcgaa atcagagcgc cggagccgtc gcgaaacagg
     2041 ggcgtcacgt gatagaagag tcatccgctc gatgctcgct gacggatcga aatat
//
LOCUS       DATIML010000685         2031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3606603, whole genome shotgun sequence.
ACCESSION   DATIML010000685 DATIML010000000
VERSION     DATIML010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3606603"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..606
                     /locus_tag="VLJ38_11745"
     CDS             <1..606
                     /locus_tag="VLJ38_11745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40241.1"
                     /translation="ESSWTAEAGYYYYETEEYTTQENGQEVQKERRVQHTRWERAWGH
                     RADEFDDVLVCASVGMPRDLADKFATFNTTQLVPYSPGFLAGWRAEEYAVDLEGGFVF
                     ARGKMEHEQENRCGKDVPGDTKRNLRVDNTFSAITFKHVLLPVWIAAYRYNNQIYRFL
                     VNGQTGEVVGKAPWSWIKIALFTLMLCATAFILYYLFGRRQ"
     gene            603..1019
                     /locus_tag="VLJ38_11750"
     CDS             603..1019
                     /locus_tag="VLJ38_11750"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HSU40242.1"
                     /translation="MTTDVVGKKVIRVVAAVVENDGLYLITQRRESAVLPLKWEFPGG
                     KVEKGEADEDALRRELRERLDAEAKIGRKLGEKVHEYDGYRVALALYEATLVEGKPLH
                     AKRVKDFRWVASADFDKYPFPDADQQTMDQLLGFSR"
     gene            1032..1916
                     /locus_tag="VLJ38_11755"
     CDS             1032..1916
                     /locus_tag="VLJ38_11755"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU40243.1"
                     /translation="MPPKKKMEPSSLGEVTAGHFKSSIEGLTRLASTHPSVRYILDVL
                     TRLREKPYATNAIIRGEPGTGKEGLAHTLHELMHPDGAPLVSVSTAGRPEEAVALELF
                     GSWPRHKGDRPVDGAVGEADEGTLVLDEVIGLSPALQRRLLDLVKRGRYHREFEDRER
                     VAQVNVIVITDGNLLAEVQAGRFRHDLYHKLARLDLVLPPLRERPEDVPGAARWMANR
                     VRLDRGLPANVELEGTPGAEAGSIVIRKEAIEALCQHPWPGNFRELEIVVERALMLYG
                     NGQEVTAADVQKALADPT"
BASE COUNT          377 a          658 c          691 g          305 t
ORIGIN      
        1 gagtcgtcgt ggacggccga ggccggctac tactactacg agaccgaaga gtacacgacg
       61 caagagaacg gccaggaagt gcagaaagag cgccgcgtgc agcacacgcg ctgggagcgc
      121 gcctggggtc accgcgccga cgagttcgac gacgtgctcg tgtgcgcctc ggtcggcatg
      181 ccgcgcgatc tcgccgacaa gttcgcgacg ttcaacacga cgcagctcgt cccctactcg
      241 cccggcttcc tcgccggctg gcgcgccgaa gagtacgccg tcgacctcga aggcggcttc
      301 gtcttcgcgc gcggcaagat ggagcacgag caggaaaatc gctgcggcaa ggacgtgccg
      361 ggcgacacga agcgcaacct gcgcgtcgac aacaccttca gcgcgatcac cttcaagcac
      421 gtgctcttgc ccgtgtggat cgcggcttat cgttacaaca accagatcta ccgcttcctc
      481 gtgaacggac agaccggtga agtcgtcggc aaggcgccgt ggagctggat caagatcgcg
      541 ctgttcacgc tgatgctgtg cgcgacggcg ttcatcctct actacttgtt cgggagaagg
      601 cagtgacgac ggacgtcgtg gggaaaaagg tcattcgtgt ggtggcggcc gtcgtcgaga
      661 acgatgggct ctatttgatc acgcagcgcc gcgagtcggc ggtgttgccg ctgaagtggg
      721 aattccccgg cggcaaggtg gaaaagggcg aggcggatga agacgcgctt cggcgcgagc
      781 tgcgcgagcg gctcgacgcg gaggcgaaga tcgggcgcaa gctcggcgag aaggtgcacg
      841 agtacgacgg ctatcgcgtc gcgctcgcgc tctacgaagc gacgctcgtc gaaggcaagc
      901 cgctgcacgc caagcgcgtc aaagattttc gctgggtggc gtcggccgac ttcgacaaat
      961 atccattccc cgacgccgac cagcagacga tggatcagct gctcggattc tcgcgctaaa
     1021 gaaaaggaat catgccgccc aagaagaaaa tggaaccgtc gtcgctcggt gaggtcaccg
     1081 cgggacattt caagagctcg atcgaggggc tgacgcggct ggcgtcgacg catccgtcgg
     1141 tgcgctacat cctcgacgtg ctgacgcggc tgcgcgaaaa gccgtacgcg accaacgcca
     1201 tcattcgcgg cgagccgggc acgggcaaag agggcctggc gcacacgctg cacgagctca
     1261 tgcatccgga cggcgccccg ctcgtctcgg tgtcgacggc gggacggccc gaagaggcgg
     1321 tcgcgctcga gctgttcggc tcgtggccgc ggcacaaggg cgatcgcccc gtcgacggtg
     1381 cggtcggcga agccgacgaa ggcacgctgg tgctcgacga ggtcatcggc ctgtcgccgg
     1441 cgctgcagcg gcgcctgctc gatctggtca agcgcgggcg ctaccaccgc gagttcgaag
     1501 atcgcgagcg cgtcgcgcag gtcaacgtca tcgtcatcac cgacggcaac ttgctggccg
     1561 aagtgcaggc gggccgcttt cgtcacgacc tctatcacaa gctggcgcgg ctcgatctgg
     1621 tgctgccgcc gttgcgcgag cgtcccgagg acgtgccggg cgcggcgcgc tggatggcca
     1681 atcgcgtgcg cctcgaccgc ggcctgcccg cgaacgtcga gctcgaaggc acgcccggcg
     1741 ccgaagccgg ctcgatcgtc atccgcaaag aagcgatcga agcgctgtgc cagcatccgt
     1801 ggccgggcaa cttccgcgag ctcgagatcg tcgtcgagcg cgcgctcatg ctctacggca
     1861 acggccagga agtgaccgcc gcggacgtgc agaaggcgct cgccgacccg acgtgactcc
     1921 cgcgcagcgc atcgcccgcg agctcggcgt ccccgatctc gtcgacaagc tgagcgcgct
     1981 gcccgccaac gaattgacat cgctgctcct cgaggtcacg cggcggcaca a
//
LOCUS       DATIML010000686         1969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3891900, whole genome shotgun sequence.
ACCESSION   DATIML010000686 DATIML010000000
VERSION     DATIML010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3891900"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1969
                     /locus_tag="VLJ38_11760"
     CDS             <1..>1969
                     /locus_tag="VLJ38_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU40244.1"
                     /translation="ALYLYPTKALSRDQEHGLLELTRAAGLELPGAVFDGDTPGDARR
                     ATRERARMLLTNPDMLHAGILPSHARWASLFQGLRYVVLDELHTYRGVFGSHMAQVLG
                     RLRRIAAFHGAKPSFLCATATIGNPREHAARLLGVEPEAVTLVDRSGAPAASREVYVY
                     NPPVVNEELGVRASYVKQAVKLAADLVRARVPTIVFGPSRNSVEVMLKYLRAEVGDGV
                     PPDAIMGYRGGYLPETRRKVEAGLREGEILCVVATNALELGIDIGDLDAVICAGYPGS
                     VAGTWQRFGRAGRRGSRSVAVLVCSSNPLDQYLAREPGVLLDAPAEEARIDPSNTEIV
                     IQHLKCAAFEAPFTLAAKGPREARPEPAVGESFLGLSVTDTRDALDYLAGHGLVHAAS
                     GRYYWSGEAFPASSVSLRNVGWDNFVIVDMASDKTLAELDYRAAHTMLHEQAIYQHDA
                     DQYQVERLDFDNHKAFVRKVEPDYFTTALTYRSVLVIEERELGRLGAAKIGFGDVKVL
                     EKITGYKKIKFFTHENAGYGDVHLPEMQMHTTSFWLTLPETIVSGLGEPRALVVDALR
                     GISVALETVASVALMCDPRDLGRTLGDGEEDGAPPGRDPHTRRTGGFEPTLFLFDSIP
                     GGVGLAERIYERSAELVARTARLVAGCACKGG"
BASE COUNT          323 a          652 c          673 g          321 t
ORIGIN      
        1 cggcgctcta cctctacccg accaaagcgc tgtcacgcga tcaggagcac ggcttgctcg
       61 agctcacacg cgccgcggga ctcgaacttc ccggcgcggt gttcgacggc gacacgcccg
      121 gtgacgcgcg gcgcgcgacc cgtgaacggg cgcgcatgct gctcacgaat cccgacatgc
      181 tgcacgccgg catcctgccg agccacgcgc gctgggcgag tctcttccag ggcctgcgtt
      241 acgtcgtgct cgacgagctt catacgtacc gcggcgtctt cggatcacac atggcgcagg
      301 tgctcggacg cttgcggcgg atcgcggcgt ttcacggggc aaaacccagc tttttgtgtg
      361 ccaccgccac gatcggcaat ccgcgcgaac atgccgcgcg cctactcggc gtcgagccgg
      421 aagcggtgac gctcgtcgat cgctcgggag cgcccgcggc aagccgcgag gtgtacgttt
      481 acaatccgcc cgtcgtgaac gaggagctcg gcgtgcgcgc gagctacgtg aagcaagccg
      541 tgaagcttgc ggccgatctc gtgcgcgcgc gcgtaccgac gatcgtgttc gggccgtcgc
      601 gtaattcggt cgaggtgatg ctcaagtacc tgcgagcgga ggtcggcgac ggcgtgccgc
      661 ccgacgcgat catgggctat cgcggcgggt acttgcccga gacgcgccgc aaagtggagg
      721 cgggcctgcg cgagggcgag atcctgtgcg tcgtcgcgac gaacgcgctc gagctcggca
      781 ttgacatcgg cgatttggac gcggtgattt gcgcgggcta cccggggtcg gtcgcgggca
      841 cttggcagcg cttcggacgc gcgggacgcc gtggctcgcg cagcgtcgcg gtgctcgtct
      901 gctcgagcaa cccgctcgac cagtacctcg cgcgcgagcc gggcgtgctc ttggacgcgc
      961 cggcggaaga ggcgcgcatc gatccgtcga acaccgagat cgtgattcaa catttgaagt
     1021 gcgccgcctt cgaggcgccg ttcacgctcg ccgccaaggg tccgcgcgag gcgcgccccg
     1081 aacccgccgt gggcgagagc ttcctcggcc tgagcgtgac ggacacgcgc gacgcgctcg
     1141 attacctcgc cggacacggt ttggtgcacg cggcgagcgg gcgttattac tggtcgggcg
     1201 aagcgtttcc ggcgagcagc gtctcgctcc gcaacgtcgg ctgggacaac ttcgtcatcg
     1261 tcgacatggc aagtgacaag acgctcgcag agctcgacta tcgcgccgcg cacaccatgc
     1321 tgcacgagca ggcgatttac cagcacgacg ccgatcaata ccaagtcgaa cggctcgatt
     1381 tcgacaatca caaggccttc gtgcgcaagg tcgagcccga ttatttcacg acggccctca
     1441 cctaccgcag cgtgctcgtg atcgaggagc gggagctcgg caggctcggt gcggcgaaaa
     1501 tcggcttcgg tgacgtgaaa gtcctcgaga agatcacggg ctacaagaag atcaagttct
     1561 tcacgcacga gaacgcgggc tacggcgacg tgcacctgcc cgagatgcag atgcacacga
     1621 cgagcttctg gctcaccttg ccggagacga tcgtgagcgg actcggcgag ccgcgcgcgc
     1681 tcgtggtcga tgcgctacgc ggcatttcgg tcgcgctcga gaccgtggcg tcggtcgcgc
     1741 tgatgtgcga cccgcgcgat ctcggtcgga cgctcggcga cggcgaagaa gacggcgccc
     1801 cgcccggacg cgatccgcac actcgccgca cgggcggttt cgagccgacg ctctttttgt
     1861 tcgattcgat tcccggcggc gtcggtctcg cggaacgcat ttacgaacgc tccgccgagc
     1921 tcgtcgcgcg gacagcacga ctcgtcgcgg gctgcgcgtg caagggcgg
//
LOCUS       DATIML010000687         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2738240, whole genome shotgun sequence.
ACCESSION   DATIML010000687 DATIML010000000
VERSION     DATIML010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2738240"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..1047
                     /locus_tag="VLJ38_11765"
     CDS             124..1047
                     /locus_tag="VLJ38_11765"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSU40245.1"
                     /translation="MGSGPSRPKVGDAYESTLEVTVSRDMRDLIEVAAKQQALMIVLS
                     EPCLGSRVLLAEAPVEIGRGARGGLLIDSDSVSRRHARVEWLGSSHRIVDLGSTNGTF
                     VNGSRVTQHELRDGDRVQIGKVLLKYIAGGNIEATYHEEFQRLMRFDALTGVFNKSSF
                     GDALRTAASTARSSSTPFSLMVLDLDHFKKINDTHGHVVGDGVLCELCSVAREAMGPD
                     GTFGRVGGEEFAALLDGASAKQMADVAERVRKATEAHKFSFEGKRLAVTVSIGVAEYS
                     PASNETVEALYERADAKLYAAKGAGRNRVCV"
     gene            complement(1333..1704)
                     /locus_tag="VLJ38_11770"
                     /pseudo
     CDS             complement(1333..1704)
                     /locus_tag="VLJ38_11770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370549.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase domain-containing
                     protein"
BASE COUNT          282 a          552 c          585 g          285 t
ORIGIN      
        1 gcacagagcc gagagacgcg cgcgcggagc atgctaaagt cagaagggca gggagtgcct
       61 tgccaagggg ctaaaacccc atgtcttttg ggggaccccg cagcgatcgc agaacgacga
      121 atcatgggct ccggacccag ccggccgaaa gtgggcgacg cctacgaatc tacgctcgaa
      181 gtgacggtct cgcgcgacat gcgagacctc atcgaggttg cggcgaaaca gcaagcgctg
      241 atgatcgtcc tgtcggagcc gtgcctcggc agtcgcgtcc tgcttgcgga agcgcccgtc
      301 gagatcgggc gcggcgcgcg cggcgggttg ctcatcgact ccgactcggt gagccgccgt
      361 cacgcgcgcg tcgagtggct cggctcgtca caccgcatcg tcgatctcgg ctcgacgaac
      421 ggcaccttcg tcaacggctc gcgcgtgacg cagcatgagc tccgtgacgg cgatcgcgtg
      481 caaatcggca aggttttgct caagtacatc gcgggcggca acatcgaggc gacgtaccac
      541 gaggaattcc agcgcctgat gcgcttcgac gcgctcacgg gcgtgttcaa caagtcgagc
      601 ttcggcgacg cgctgcgcac ggctgcgagc acggcgcgct cgagctcgac gccgttttcg
      661 ctgatggtgc tcgacctcga ccacttcaag aaaatcaacg acacgcacgg tcacgtcgtg
      721 ggcgacggcg tgctctgcga gctctgctcg gtcgcgcgcg aggcgatggg acccgacggc
      781 acgttcggcc gcgtcggcgg ggaggaattc gcggcgctgc tcgacggcgc ctccgcgaag
      841 caaatggcgg acgtcgccga acgcgtgcgc aaggcgacgg aagcgcacaa gttcagcttc
      901 gagggtaaac gcctcgccgt caccgtgagc atcggtgtgg cggagtattc gccggcgtcg
      961 aacgaaaccg tcgaagccct gtacgagcgc gccgacgcga agctctacgc ggccaagggc
     1021 gcaggccgca accgcgtctg cgtgtgagta gcaaccaggt cagcggcgcg ccgaactctc
     1081 gctcggcacg ccgcttcttc caggcttcga ggactacgcg cggagcgccg tcgcgcggag
     1141 cttgcgcgtc gaggcgccgt tcgaggcgcc gtgattgtcc tcgggcttcg gcgccgacgc
     1201 cttggccttc ttcgcgtcct tcgctttggc gtcggacttg ccgtcgctct tggcggccgc
     1261 gcgcgatttc ggggctttga cgggagcggc cttcatcttg acgccgagca ggtcatcggc
     1321 gagctgggcg gcgcgctcgg tcttttccca ggcgaactcc ggccggccga agtggccgta
     1381 cgacgaggtc ggctggtaaa tcggacgcaa gaggtcgagc tcttcgatca gggcgcgcgg
     1441 gcgcatgtcg aagtgctcgc tcacgtaagc cgcgagtttt tcgtcttcga ttttgccggt
     1501 gccgaacgtg tgcacgtaca cgcccatcgg cttcgcgacg ccgatcgcgt aggcgacctg
     1561 cacctcgcaa cgcgacgcta ggccggcggc gacgatgttc ttggcgacgt agcgcgcgta
     1621 gtagcaagcc gaccgatcga ccttcgacgg atctttgccg ctgaaggcgc cgccgccgtg
     1681 gcggcccatg ccgccgtaag tatc
//
LOCUS       DATIML010000688         3238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3892163, whole genome shotgun sequence.
ACCESSION   DATIML010000688 DATIML010000000
VERSION     DATIML010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3892163"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1384)
                     /locus_tag="VLJ38_11775"
     CDS             complement(<1..1384)
                     /locus_tag="VLJ38_11775"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU40246.1"
                     /translation="MHLPPPESKATESKGNNDESAGLPRPFERFTLLRRIARGGMGEL
                     YLATAGGIEGAERPVVIKIIRKDHDTDSSFLARFLDEARIQSQLYHPGVAQILEAATD
                     AAGKPYVAVEYVEGHNLGDVRARAAQLGVRVEWPEAVALALCVADALAHVHERTDAAG
                     KPLDIVHRDLSPQNVMVGYGGDVKLIDFGTARGENRRCHTVAGVVFAKPGYVAPEVAN
                     NTPGGVPADLYAFGVMLWELVAGRRFLVGEPSAHLAAVGAGTKSLTPIAQSVGAPLEL
                     DAVLARLTAVSIEQRYGSARDAMAELVRILQRAPSRSDGDRSVRGRVAELMHRLYPAE
                     PARSRADFQALLAGARSQQPVLPVLPPSPEPPAPDDHLLPGTRYRIERELGRGAMGVV
                     YEATHIDIGRKVALKVLERELSSGEARGRFVAEARAVARIDHEGLVRLHEFGVTSEGR
                     PFYAMELVEGE"
     gene            1523..1975
                     /locus_tag="VLJ38_11780"
     CDS             1523..1975
                     /locus_tag="VLJ38_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40247.1"
                     /translation="MTKPIPDVASRFRARTQLGSVRRLSVLLVAVSLVSLFSANARAA
                     VSSHNAVPMCSSDGRSVIAPPIVLPWRMLTLEAPPPCPQADDTLFQSATEHHPPAPSK
                     PPAPEAPRAVPLRDAELARPAAARVPITALAPLASRELRGTLYRPPRK"
     gene            2196..>3238
                     /locus_tag="VLJ38_11785"
     CDS             2196..>3238
                     /locus_tag="VLJ38_11785"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSU40248.1"
                     /translation="MNKGTAIVGFLLSFIAGMFLMWGADRRSGADIHAESGTTASAGD
                     QSGASVPVTSNDPQWGKPNAPVTIVEISDFECPFCGRVVPTLKQIKETYGPDKVRFVF
                     KHSPLPFHKDARPAADAAATVFGLGGSDAFWKFHDTAFTNQRALTPENFEKWATEAGV
                     DAGKFKAALASKKFTSKVDDDLAFSKKVGANGTPAFRINGVTVSGAQPFDKFKEVIDA
                     QLAEAQKLVASGTKASDVYVQLTNKNFQAPADNGKDDQKKPQKNEEEEDKSVWKVPVG
                     AEDPVRGPKDALVTIIEYSDFQCPFCKRVEDTMKQVVEAYPNDVRVIWKDNPLPFHPR
                     AKPSAVLARMAYE"
BASE COUNT          564 a         1107 c         1086 g          481 t
ORIGIN      
        1 gttcgccttc gacgagctcc atggcgtaga agggacgccc ttcgctcgtg acgccgaact
       61 cgtgcaagcg cacgagccct tcgtgatcga tgcgggccac ggcgcgcgct tccgccacga
      121 agcgcccgcg cgcttcccca ctcgagagct cgcgctcgag caccttgagc gccaccttgc
      181 ggccgatgtc gatgtgcgtc gcttcgtaca cgacgcccat ggcgccgcgg ccgagctcgc
      241 gctcgatgcg atagcgcgtg ccgggcaaca ggtggtcgtc gggcgccggc ggttcgggcg
      301 agggcggcag cacgggcagg actggttgct gcgagcgcgc gccggcgagc aaggcctgaa
      361 aatcggcgcg cgagcgcgcg ggctcggcgg gatacaagcg atgcatgagc tcggccacgc
      421 gaccgcgcac gctgcgatcg ccgtcggaac ggctgggcgc gcgctgcagg atgcgcacga
      481 gctcggccat ggcgtcgcgc gcggagccgt agcgctgctc gatgctgacg gccgtgagtc
      541 gcgcgaggac ggcatcgagc tcgagcggcg cgccgaccga ctgggcaatc ggcgtgaggc
      601 tcttcgtgcc ggcgccgacg gccgccaggt gcgccgacgg ttcgccgacg aggaagcgcc
      661 ggcccgcgac gagctcccag agcatcaccc cgaaggcgta gagatcggcg ggaacgccgc
      721 cgggcgtgtt gttggcgacc tcgggtgcga cgtagccggg cttggcgaac acgacgccgg
      781 ccaccgtgtg gcagcgacgg ttttcgccgc gtgccgtgcc gaagtcgatg agcttcacgt
      841 cgccgccgta gccgaccatc acgttctgcg gcgatagatc gcgatgcacg atgtcgagcg
      901 gcttgcccgc ggcgtcagtg cgttcgtgca cgtgagcgag cgcgtcggcg acgcaaagcg
      961 cgagcgccac ggcctcgggc cactcgacgc gcacgccgag ctgcgcggcg cgggcgcgca
     1021 cgtcgcctaa gttgtgccct tcgacgtact cgacggcgac gtacggcttg cccgccgcgt
     1081 ccgtcgccgc ttcgaggatc tgcgcgaccc cgggatggta gagctgcgac tgaatgcgcg
     1141 cctcgtcgag aaagcgcgcg agaaaggagc tgtcggtgtc gtgatccttg cggatgatct
     1201 tgatcaccac cggtcgttcg gcgccctcga tgccgccggc cgtcgccaag tagagctctc
     1261 ccatgccgcc ccgcgcgatg cgacgaagca gcgtgaagcg ctcgaacggc cgcggcagcc
     1321 ccgcggactc gtcgttattt ccctttgatt ccgtggcctt ggactcgggg ggcggcaggt
     1381 gcataggggc atggtgccta tgtcccacaa tgtaggcaaa gaaagcggct ggccggaatc
     1441 aacgcggggg tcgcggagtt ctcacggtgg tcccgattgt gaaacgaaaa acggtaggta
     1501 gactgcgcgt gttttcgtag cgatgacgaa gccgattcca gacgtggcga gccgatttcg
     1561 cgctcggacc cagctcgggt cggtgcggcg tctcagcgtt ttgctcgtgg ccgtgagcct
     1621 cgtgagcctc ttcagcgcga acgcacgcgc cgccgtctcg tcacacaacg ccgtgcccat
     1681 gtgcagtagc gacgggcgtt ccgtgatcgc gccgcccatc gtgctgccct ggcgcatgct
     1741 gacgctcgaa gcgccgcccc cctgccccca ggcggacgac acgctcttcc aatccgcgac
     1801 cgagcatcac ccgcccgctc cgtccaagcc tcccgcaccc gaagcgccgc gcgccgttcc
     1861 gctgcgcgac gccgaactgg cgcggcccgc tgccgcacgc gtaccgatca ccgcgctcgc
     1921 gccgctcgcc agccgcgagc tccggggcac gctctatcga ccgccgcgca agtagcggcg
     1981 attcgggggc gaggcaccga tccgcacgcg tccggcgcgt acggatgctt cgccgctctg
     2041 gcgcgctcat ttaggcgcgc ctccaacgcg ttacctaccg cacctaccgc gagccgactc
     2101 gttcggtgac gcggctcgtc cgaacgcgag tgccggaagc gcgcgaggac gccacgactt
     2161 tacgtctcga aaatacggaa aatcaggaga atatcatgaa caagggaacc gccatcgtcg
     2221 ggttcttgct gagcttcatt gccggcatgt tcctcatgtg gggcgccgat cggcgctcgg
     2281 gcgcagacat tcacgccgaa agcggcacta ccgcgagcgc gggggatcaa agcggcgcaa
     2341 gcgtgcccgt cacgtccaac gacccgcagt ggggcaaacc gaacgcaccg gtcaccatcg
     2401 tcgaaatcag cgatttcgag tgcccgttct gcggccgcgt cgtgccgacg ctcaagcaaa
     2461 tcaaggagac ctacggcccg gacaaggtcc gcttcgtctt caaacacagc ccgctcccgt
     2521 tccacaagga cgcgcgcccg gcagccgacg ccgccgcaac cgtcttcggc ctgggcggca
     2581 gcgacgcgtt ctggaagttc cacgacacgg cgtttacgaa ccagcgcgcg ctcacgccgg
     2641 agaacttcga gaagtgggcg accgaagccg gcgtcgacgc cggtaagttc aaggcggcgc
     2701 tcgcctcgaa gaagttcacc tccaaggtgg acgacgatct cgccttctcc aagaaggtgg
     2761 gcgcgaacgg caccccggcg ttccgcatca acggcgtcac cgtgagcggc gcgcagccgt
     2821 tcgacaagtt caaggaagtg atcgacgccc agctggccga ggcgcagaag ctcgttgcga
     2881 gcggcaccaa ggcgagcgac gtgtacgttc agctcacgaa caagaacttc caggcgcctg
     2941 ccgataacgg caaagacgac cagaagaagc cgcagaagaa cgaggaagag gaagacaaga
     3001 gcgtttggaa ggtgccggtc ggcgccgagg atccggtccg cggacccaag gacgctctcg
     3061 tcaccatcat cgagtactcc gacttccagt gccccttctg caagcgcgtg gaagacacga
     3121 tgaagcaggt cgtcgaggcc tacccgaacg atgtgcgcgt gatctggaag gacaacccgc
     3181 taccgttcca cccgcgcgcc aagccctccg ccgtgctcgc gcgcatggct tacgagaa
//
LOCUS       DATIML010000689         1816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3030274, whole genome shotgun sequence.
ACCESSION   DATIML010000689 DATIML010000000
VERSION     DATIML010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3030274"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VLJ38_11790"
     CDS             <1..488
                     /locus_tag="VLJ38_11790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40249.1"
                     /translation="LWSLGGEQRWYLLELEGTSELLAPESDLVLVSTFMPELLKSYLA
                     GAPFASTRFSRAHELFAYLRYENEEADARRALSRRRVLEDALDAALVSERTGRVIGGG
                     LGLRHSHVYFALERPAHGVTRARQIAAKLRVGGPGSAICFCDHALVRGVAAERSRPAG
                     S"
     gene            583..1494
                     /locus_tag="VLJ38_11795"
     CDS             583..1494
                     /locus_tag="VLJ38_11795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40250.1"
                     /translation="MSDSIRITASLRMERPAAVVRQQYRDIDHHIRNNVHPSIQYAWE
                     PTDPGQRKIRTTFRILGVPQYDVSLLEDADDGSFLIRYLEGTNAGMLLVHRFVPLGPN
                     ATNVELTADAPATLGRKLLGPLFAAGGRQVMKKALAEDKRDLEQGLFQPGKAAGNLDK
                     ALASLKPIAALGADAKRAVLEATCLVAVADNIVEASERDAIDRLASVIAATDERAFID
                     RRLQDLTAAASSERIAAEAVRIGQSLLNAAVGLEGVTAAVVVALVSDGMSLGELELLR
                     HLAEAAGIPDGSLPALVEGADRVLSEA"
     gene            complement(1565..>1816)
                     /locus_tag="VLJ38_11800"
     CDS             complement(1565..>1816)
                     /locus_tag="VLJ38_11800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40251.1"
                     /translation="NARALSASERRALAREFDLLTVQRKLKDAGRFIFIQRRRQDPSF
                     LPFVAPTLDIVTSALERLSDEPALRDLAAIVAAARRACE"
BASE COUNT          292 a          604 c          616 g          304 t
ORIGIN      
        1 cgctgtggtc gctcggtggc gagcagcgct ggtacctgct cgagctcgaa ggcacgagcg
       61 agctgctcgc gccggagtcg gacctcgtgc tcgtctccac gttcatgccc gagctcttga
      121 aatcgtatct cgcgggggcg ccttttgcgt caacgcgctt ttcgcgcgct cacgagctct
      181 tcgcgtactt gcgttacgaa aacgaggaag ccgacgcgcg ccgcgcgctg tcccgccgtc
      241 gcgtgctcga agacgctctc gacgcggcac tcgtgagtga gcggacggga cgcgtcatcg
      301 ggggcggcct gggcttgcgc cattcccacg tgtatttcgc gctcgagcgg ccggcgcacg
      361 gggtgacacg ggcgcgacaa atcgccgcaa aactgcgcgt tggaggtccc ggaagcgcga
      421 tttgtttctg tgatcatgcg ctcgttcgcg gtgtcgctgc ggaacgctcg cggccggcgg
      481 gctcatgatt tccggacggt gacgcgcgag gggagttacg gtattcgtgc ggtcgggaat
      541 gatccggctg gggccgtcgt tcgtaggttt cgggaggtca cgatgtccga ttcgattcgc
      601 atcaccgctt cgctccgcat ggagcgccct gccgcagtcg tgaggcagca gtatcgggac
      661 atcgatcatc acattagaaa taacgtgcac ccgagcatcc agtacgcgtg ggagcccacc
      721 gacccgggcc agcgcaagat ccgcacgacg tttcgcattc tcggcgtgcc gcagtacgac
      781 gtctccctgc tcgaggatgc cgacgacggc tcgttcctga ttcgctacct cgaaggcacg
      841 aacgccggca tgctgctcgt gcatcgcttc gtcccgctcg gcccgaacgc gaccaacgtc
      901 gagctcaccg ccgacgcgcc agcgacgctc ggccgcaagc tgctcggccc gcttttcgcc
      961 gcgggcgggc gccaggtcat gaagaaggcg ctcgcggaag acaagcgcga cctcgagcag
     1021 ggcctcttcc aacccggcaa agccgcgggc aacttggaca aggcgctggc gtcgctcaaa
     1081 cccatcgccg ctctcggcgc tgacgccaaa cgcgccgtgc tcgaagccac gtgcctcgtc
     1141 gcggtcgcgg acaacatcgt ggaagcaagc gaacgggacg ccatcgaccg gctcgcctcg
     1201 gtcattgccg cgacggacga gcgagccttc atcgaccggc gcctgcaaga cctcacggcc
     1261 gcagccagct ccgaacgcat cgccgccgaa gcggtgcgca tcggccaaag tctgctcaac
     1321 gcggctgtcg gcctcgaagg cgtcacggcc gctgtcgtgg tcgccctcgt gagcgacggc
     1381 atgtctctcg gcgagctcga actcctccgc cacctcgccg aagccgccgg catccccgac
     1441 ggctcgctac ccgcactggt cgagggcgcg gatcgcgtgc tgagcgaagc gtagagacgc
     1501 ggttctcgac gccggggaga agccgcgcag cttgcgatcg cgtccggcgt ttaaaatccc
     1561 gagctcattc gcacgccctc cgcgctgccg ccacgatcgc ggccaggtcg cgcagtgccg
     1621 gttcatccga aagccgttcg agggcgctcg tgacgatgtc gagtgtggga gcgacgaagg
     1681 ggaggaagct cgggtcctgg cggcggcgct ggatgaagat gaagcggccg gcatctttca
     1741 gtttgcgctg gacggtgagg aggtcgaact cgcgggctag ggcgcggcgt tcggatgccg
     1801 agagagcgcg ggcgtt
//
LOCUS       DATIML010000690         4687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2449338, whole genome shotgun sequence.
ACCESSION   DATIML010000690 DATIML010000000
VERSION     DATIML010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2449338"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VLJ38_11805"
     CDS             complement(<1..443)
                     /locus_tag="VLJ38_11805"
                     /inference="COORDINATES: protein motif:HMM:NF012691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HSU40252.1"
                     /translation="MNNHASQSDAFVLFGATGDLAYKKIFPALHWMIKRGNPGFPIIG
                     VSRGGSGLEQLRQRVQESVKEYGGGADPRAIEILTKNLSYVDGDYRTEELFRKLRETL
                     GGAKRPLYYLSIPPSVFPQVVELLGKTRCSDGARVVVEKPFGRDLA"
     gene            complement(533..2242)
                     /locus_tag="VLJ38_11810"
     CDS             complement(533..2242)
                     /locus_tag="VLJ38_11810"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU40253.1"
                     /translation="MPPLALRAPSFRGGVAWLIGPRGAPFAERLVALLTAAIVVVGLL
                     LRARGYLWNPTAFWLDECSWAMNLVEQPLLELCIRPIGFMWTSRELARVFSLSEPVLR
                     FMPWLAGVSTVLMTPALARRLFVNPGARLLFVFIIALHPVAIDFSKEFKPYSISLTLH
                     LLLILLTLRYLDTQRGRDLAWLLVAATLGGLFAQDLVFAYPGVFLLAGYTSLRLDRRH
                     LIAIVSVAAFIILLLLLQYFFSWRKNPPSDTNMWGNKYNVFYEGRHAYSTWASERHES
                     MAEFPAFRHKFWQTPLLHGRRADFARAVDNMVWLALHVAGLCVIAIWRRQRAVLLVLP
                     VALVWAFNMLRLWPVGAFRANLFIVGYMSAIACMALDVPRREVAKLGDVLPALVIVLL
                     PFLIFDRYWSDHKQSLTYSSAFPRALDTLLRVKAEAGGDVREPLVLDRRSCDPFRYYT
                     EFHPRRSARLGPAVRAAFDITCVTDDRLYRHALLAAMPRAPLHVYTILHSVRPVWNLV
                     RHHLLGDAQQTYAEKIGPHTVMAFQRPAAGETATPAPPPAESAFAPAPEPETQEDGTS
                     PND"
     gene            2435..3505
                     /locus_tag="VLJ38_11815"
     CDS             2435..3505
                     /locus_tag="VLJ38_11815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40254.1"
                     /translation="MSAMRLLVDILHPAHVHVFGALAKELGSRGHDVRFTLRDKDVAR
                     ELLDQHGIGYELLSRQRQGVGLAGEFVQRSARLWHVAAAFRPHFLAGVMGPSITAVGR
                     LRRTLTRDRARIAVFYNTEIARLTNTVVYPLADYVCTPDSYWAKVYGNHVTYPGYHEL
                     TYLHPHRFKPDPEVPRRHGIDPTEPYFVVRFVSYKSSHDLGTSGLTLAQKIALIGALQ
                     EFGRVYISSEGALPPELEAYKLRIPASDMHQVLAFARLLVGESATMASEAAVLGVTSF
                     YISPFGRGFTDDQERRYQLVYNFNGARFRADWLSDVRRLAADPHLVARAHAAQDRLLH
                     EKTDVTLWMVDFFEREYKKHFG"
     gene            complement(3525..4040)
                     /locus_tag="VLJ38_11820"
     CDS             complement(3525..4040)
                     /locus_tag="VLJ38_11820"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSU40255.1"
                     /translation="MSQHETPGDRASASVLVRVPQTEAFRLFTEEIDTWWRRGLRYRI
                     GKRRSVVQLEPKLDGRLFEAFDTADGSKIVETGRVTHFDPPRRLVLAWRAVNFAPGEQ
                     TEVEVSFEPTNGGTLVTVHHRGWSRIRGDHPVRHGADAPSFIARMGLWWAGLLTSLRE
                     LAEPPTGTPPG"
     gene            complement(4037..4372)
                     /locus_tag="VLJ38_11825"
     CDS             complement(4037..4372)
                     /locus_tag="VLJ38_11825"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSU40256.1"
                     /translation="MSSLDTTLVALADPTRRAVIDLLRKKPRRAGELADLLSTTRPAM
                     SRHLRALRKTGLVSETEPDHDARVRLYRLERAPFRELRGWLAEVEAFWDAQLTAFKVH
                     AERGGRGRR"
     gene            complement(4374..>4687)
                     /locus_tag="VLJ38_11830"
     CDS             complement(4374..>4687)
                     /locus_tag="VLJ38_11830"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU40257.1"
                     /translation="GGRIIHSELKLEEALVTVAGTDGREAWQSNYRSPKSIGGAVTQA
                     LAFYIDDVDAHAERAVAAGAHVVRPIETKDYGEDYWADRSYGALDPEAHLWWFMQRVR
                     G"
BASE COUNT          826 a         1574 c         1563 g          724 t
ORIGIN      
        1 gcgaggtcgc gcccgaacgg cttttcgacg acgacgcgcg cgccgtccga gcagcgcgtc
       61 ttgcccagca gctcgacgac ttgggggaaa acgctcggcg ggatcgacaa gtagtagagc
      121 ggccgcttcg cgccgccgag cgtctcgcgc agcttccgga agagctcctc ggtgcggtag
      181 tcgccgtcga cgtacgacag gttcttcgtc aggatttcga tggctcgggg gtcggcgccg
      241 ccgccatact ccttgacgct ctcctgcacg cgctggcgca gctgctcgag gcccgaaccg
      301 ccgcgcgaga cgccgatgat gggaaacccc gggttaccgc gcttgatcat ccagtggagc
      361 gcgggaaaga tcttcttgta agcgagatcc cccgtagcgc cgaacagaac gaatgcgtcc
      421 gactgagagg cgtggttgtt catcgcgggc cgatctgtac catccccccc gcgcgatcac
      481 acgcgcgtcc atgttcgcgc tcggagcgcg acgggagcgc gggctccggt catcaatcgt
      541 tcggcgacgt cccgtcttcc tgtgtttcgg gctcgggtgc cggggcgaaa gccgactccg
      601 cgggaggcgg ggcgggcgtg gcggtttcgc ccgcggccgg acgctggaac gccatcacgg
      661 tgtgcgggcc gatcttctct gcgtacgtct gctgcgcgtc gccgagcaaa tggtgccgca
      721 cgagattcca gacgggacgc acgctgtgca gaatggtgta gacgtgcagc ggcgcgcgcg
      781 gcatcgccgc gagcagggca tgccgataga gccggtcgtc cgtgacgcag gtgatgtcga
      841 aggccgcgcg cacggcgggc ccgaggcggg ccgaacgcct cgggtggaac tcggtgtagt
      901 aacggaacgg atcgcaggag cgacgatcga gcacgagcgg ctcccgtacg tcaccgcccg
      961 cctccgcctt cacgcgtagc agcgtatcga gggctcgcgg gaacgccgaa gaatacgtga
     1021 gcgactgctt gtgatcgctc cagtagcgat cgaaaatgag aaacggcaag agcacgatca
     1081 cgagcgccgg caatacgtca ccgagctttg cgacctcgcg ccgcggcacg tcgagcgcca
     1141 tgcacgcgat ggccgacatg tagccgacga tgaacaaatt cgcgcgaaac gctccgacgg
     1201 gccaaagccg gagcatgttg aacgcccaca ccaacgctac gggcaagacc agcagcacgg
     1261 cgcgctggcg ccgccaaatc gcgatcacgc agagacctgc gacgtggagc gcgagccaga
     1321 ccatgttgtc gacggcgcgc gcgaagtccg cgcggcggcc gtgcaagagc ggcgtctgcc
     1381 agaacttgtg gcggaacgcg gggaactccg ccatcgattc gtgacgctcg ctcgcccagg
     1441 tcgagtaggc gtgccggccc tcgtagaaga cgttgtactt gttgccccac atgttcgtgt
     1501 cggacggcgg gttcttgcgc cagctgaaga agtactggag cagcaagagc aggatgatga
     1561 acgccgccac cgagacgatg gcgatcaagt gccggcggtc gagtcgcagc gacgtgtatc
     1621 ccgcgagcag gaacacacct gggtaggcga acacgagatc ctgcgcgaat aggccgccca
     1681 gagtcgcggc gacgaggagc caggcgaggt cgcgcccgcg ctgcgtgtcg aggtagcgca
     1741 gggtgagcag gatcaggagc aaatgaaggg tcaggctgat cgagtacggc ttgaactcct
     1801 tcgagaaatc gatcgcgacc gggtgaagcg cgatgatgaa gacgaagagc agccgcgccc
     1861 cggggttcac gaacaggcga cgcgcgagcg cgggcgtcat cagtaccgtg ctgacgcccg
     1921 cgagccaggg catgaagcgc aggaccggct ccgacagcga gaacacgcga gcgagctcgc
     1981 ggctggtcca catgaagccg atcggacgaa tacagagctc gagcagcggc tgctcgacga
     2041 gattcatcgc ccacgagcac tcgtcgagcc aaaaagccgt cgggttccag agatagccgc
     2101 gcgcccgcaa gagcaggccg acgaccacga tcgccgccgt gagcagcgct acgaggcgct
     2161 cggcgaacgg cgcgccgcgc ggacctatca gccacgccac gccgccgcga aagctcggcg
     2221 cgcgcagggc aaggggaggc atggtcccga aagctacgaa ccgcagctat aaagtaaagc
     2281 gagaagcaga atgcggcgcg tgccgcgcgc ggccacgccg gccgggtggc cagaatgcgc
     2341 gtgcgcgtcg ctggacgttc gggtagaagc tggggcaccc tacgctgcgg cgtcgcgtcg
     2401 tcggatccgg atcggatccc gtgcggagcc gagcttgagc gccatgcggt tgctcgtcga
     2461 tattctgcac cccgctcacg tccacgtctt cggagcactc gcgaaagagc tcggctcgcg
     2521 cggccacgac gtgcgcttca ccctgcgcga caaggacgtt gcacgcgagc tcctcgatca
     2581 acacggcatc ggctacgagc tcttgtcacg gcagcgacaa ggcgtgggac tcgcgggcga
     2641 gttcgtgcag cgctcggcgc ggctctggca cgtcgcggcc gcatttcgcc cgcattttct
     2701 ggccggcgtc atggggccga gcatcacggc cgtgggccgt ctgcgccgta ccctcacgcg
     2761 cgaccgcgcg cgcatcgccg tcttttacaa caccgagatc gcgaggctca cgaacaccgt
     2821 cgtctacccg ctcgcggatt acgtctgcac gcccgactcc tactgggcca aggtctacgg
     2881 caaccacgtc acctacccgg gttatcacga gctcacgtac ctgcacccgc accgcttcaa
     2941 accggacccc gaagtcccgc ggcgccacgg catcgatccg acagagcctt acttcgtcgt
     3001 gcgcttcgtc tcgtacaagt cgtcgcacga tctcggcacc tccggcctga cgctcgcgca
     3061 gaagatcgcg ctcatcgggg cgttgcagga gttcggccgc gtttacatca gctcggaggg
     3121 cgcgctcccg cccgagctcg aggcgtacaa gctcaggata ccggcttccg acatgcatca
     3181 agtgctcgcg ttcgcgcgcc tgctcgtcgg cgaaagcgcg acgatggcgt cggaggcggc
     3241 cgtgctcggc gtcacgtcct tttacatctc gccgttcgga cgcggcttca cggacgacca
     3301 ggagcgccgc taccaactgg tttacaactt caacggcgcg cgcttccgcg ccgattggct
     3361 cagcgacgtg cgccgcctcg ccgccgatcc gcacctcgtg gcgcgcgcgc acgccgcgca
     3421 agaccgcctg ctccacgaga agaccgacgt gacgctctgg atggtcgatt tcttcgagcg
     3481 cgaatacaaa aaacacttcg gttgaaggcg aaggtcctgc ctgctcaacc cggcggagtc
     3541 ccggtcggtg gttccgcgag ctcccgcaac gaggtgagaa gccccgccca ccaaagtccc
     3601 atcctcgcga tgaagctcgg cgcgtccgcc ccgtgccgca cgggatggtc gccgcgaatg
     3661 cgactccagc cacggtgatg aacggtcacg agcgtcccgc cgttggtcgg ctcgaacgac
     3721 acctccacct ccgtctgctc gcccggcgcg aaattgacgg cgcgccaagc gaggacgagc
     3781 cgtcggggcg gatcgaaatg cgtgacgcgc cccgtttcca cgatcttcga gccgtcagcg
     3841 gtgtcgaacg cttcgaacag gcgcccgtcg agcttcggct ccagctggac gacgctgcgc
     3901 cgcttgccga tgcgatacct gaggccgcgc cgccaccacg tgtcgatttc ttccgtgaac
     3961 aggcgaaacg cttccgtctg cggcacgcgg acgagcacgc tggcgctcgc gcgatcaccc
     4021 ggtgtttcgt gctggctcat ctgcggccgc gcccgcctcg ttccgcatgc actttgaagg
     4081 ccgtgagttg cgcgtcccag aaagcttcca cctccgcgag ccagccgcga agctcgcgga
     4141 atggtgcgcg ttcgaggcgg tacaggcgca cgcgcgcgtc gtggtccggc tcggtctcgc
     4201 tcacgagacc cgtcttgcgc aacgctcgca agtggcggct catcgcgggc cgcgtcgtcg
     4261 acaaaaggtc agcgagctcg cccgcgcggc gcggcttttt tcgcaataga tcgatgacgg
     4321 cgcgccgcgt gggatcggcc agcgcgacca gcgtcgtgtc gagcgacgac attttagccg
     4381 cgcacgcgct gcatgaacca ccacaagtgg gcttcggggt cgagcgcgcc gtagctgcgg
     4441 tcggcccaat agtcctcgcc gtagtccttg gtctcgattg ggcgtacgac gtgggcgccc
     4501 gccgccacgg cacgctccgc gtgggcgtcg acatcgtcga tgtagaacgc gagcgcctgc
     4561 gtcaccgcgc cgccgatgct cttaggactg cggtagttgc tctgccaagc ctctcgaccg
     4621 tccgtgccgg ctaccgtgac cagtgcctcc tcgagcttga gctcggaatg gatgatgcgg
     4681 ccgccgt
//
LOCUS       DATIML010000691         2905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1300652, whole genome shotgun sequence.
ACCESSION   DATIML010000691 DATIML010000000
VERSION     DATIML010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1300652"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1039)
                     /locus_tag="VLJ38_11835"
     CDS             complement(<1..1039)
                     /locus_tag="VLJ38_11835"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSU40258.1"
                     /translation="MDLGFLEDAPFVCYAFRRERNEFVLAHVNAAARQGNPTLGSLIG
                     KPMAHLYSDQPAVIADASRCVSEGVVVDHEIAVRRHDRIEATLLLSLRFVPAPPDHLV
                     LFVQEMNQPDMARKALHESEARYHSLVASLPDAVLMRGADGRVLFCNDVALRLFGAAS
                     HADLLGKRDVLAPNVIVRDEAGALIHAQNVPSLRVIMHGEPEHGLYSFDTRGDLRWMR
                     VAAQPIRSGDGRITGSVTTFTDVTERIVAQRSLRESAARLDLALAAARMGVWEYDPAL
                     DRGWWSPNLSEIFRLGQREPGLALFLNAVHLDERDVLRQQLEALSRGADGHTIEVEFR
                     IVGDDGAARWAR"
     gene            1258..2745
                     /locus_tag="VLJ38_11840"
     CDS             1258..2745
                     /locus_tag="VLJ38_11840"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HSU40259.1"
                     /translation="MRQLTWPRRFAVLSVIGLLPLGCARSATSGQLHQDVAPETAKLA
                     HSPVQVLPTAALAVTGPQGAASIADITEHVLPSVVNISMTKAVKMRGGMQGMPFPFFF
                     GQPPEGGERREQGMGSGVVISNDGYIITNNHVVEDAQAIKVTLYDKREFDAEVVGTDP
                     KSDVALIRLKNSPADLRAIEIDDSSQLRLGDVVLAIGNPFGVGQTVTMGIVSAKGRSD
                     LGIEDYEDFIQTDAAINPGNSGGALVDMNGKLVGINTAILSRSGGYQGIGFAIPTNMA
                     IPIMESLRKYGKVSRGWLGVSIQDVDGEISQAMKLPTARGVLIADVQAGSPAAKAGVL
                     RGDVVEKVQGRAVATTGEFRNAIAAAGAGHTVDLELYRDGKLRVVPAALGEATSDAAP
                     STSTAHPAAPQGLDGLTVSDLTPEARRAFSVNDAGIKGVIVTDLARNSPAARAGLHPG
                     DVLMEVNRKPVTTVREFADAYGKARGTVLLLVHRHGSTAYIVVKR"
BASE COUNT          501 a          984 c          965 g          455 t
ORIGIN      
        1 cgcgagccca acgggccgcg ccgtcatcgc cgacgatgcg aaactcgacc tcgatggtgt
       61 gaccgtccgc gccccggctg agcgcctcga gctgctggcg cagaacgtcg cgctcgtcga
      121 ggtgcacggc gttcagaaac agcgcgagcc ccggctcgcg ctggccgagc cggaagattt
      181 ccgacaggtt cggtgaccac cagccgcgat cgagcgctgg atcgtattcc caaacgccca
      241 tgcgtgccgc ggcgagcgcg agatccagtc gcgcagcgct ttcgcgcagc gagcgttgcg
      301 cgacgatgcg ctcggtcacg tcggtgaacg tcgtgaccga gcccgtgatg cgtccatcgc
      361 ccgaacggat cggctgggcg gcgacgcgca tccagcgtaa atcgccgcgg gtatcgaacg
      421 agtagagtcc gtgttcgggc tcgccgtgca tgatcacgcg taagctcggc acgttctgcg
      481 cgtgaatcag cgcgccggct tcgtctcgga cgattacgtt cggcgcgagc acgtcgcgct
      541 tgccgagcag gtccgcgtga ctcgcggcgc cgaacaagcg cagcgcgacg tcattgcaga
      601 agaggaccct tccgtccgcc ccgcgcatga ggacggcgtc gggcagcgac gcaaccaggc
      661 tgtgatagcg cgcctcgctt tcgtgcaagg ctttccgggc catgtccggc tggttcatct
      721 cctgcacgaa cagcaccaag tgatcgggcg gggccggcac gaagcgcagg ctgaggagca
      781 gcgtggcttc gatgcgatcg tgacggcgca ccgcgatctc gtggtcgacg acgacgccct
      841 cgctgacaca gcggctcgcg tcggcgatga cggccggctg gtcgctgtag agatgcgcca
      901 tgggcttgcc gatcaacgag ccgagcgtcg ggttaccctg gcgcgcggcg gcgttgacgt
      961 gcgcgagcac gaattcgttc cgctcacgtc gaaacgcgta acagacgaag ggggcgtctt
     1021 cgagaaaacc caagtccatg gtcgcgcgca tccgacccaa ggccacaccg ccgagactcc
     1081 atcgcaaacg gccacagggg gcgtggaggt aaggccccat gctactttgg ggcggctgcc
     1141 cgtgttgctc gaaccgacga gcccggagtg tcccccgcga tccacccgaa atgacgtggc
     1201 tttcgcgttc cgggaatcgg ccgcccgagc ggcgtgttcg agcaagagaa aaagcccatg
     1261 agacagctca cctggccccg tcgcttcgcc gttctctccg ttattggcct gcttccgctc
     1321 ggctgcgccc gctcggccac ctccggccag ctgcatcaag acgtggcgcc cgagaccgcc
     1381 aagctcgctc actctccggt tcaggtgctg ccgacggcgg cgctcgcggt gaccggtccc
     1441 cagggagccg cgagcatcgc cgacattacc gaacacgtgc tgccgtcggt cgtgaatatc
     1501 tcgatgacca aagcggtgaa gatgcgcggc ggcatgcaag gcatgccgtt tcccttcttc
     1561 ttcggtcagc cgcccgaggg cggcgagcgg cgggagcagg gcatgggctc gggcgtcgtg
     1621 atctcgaacg acggctacat catcacgaac aatcacgtcg tcgaggacgc tcaggcaatc
     1681 aaagtcacgc tttacgataa gcgcgagttc gacgccgaag tcgtcggcac cgatccgaag
     1741 agcgacgtcg cgctgattcg cctcaagaac agccccgcgg atctgcgcgc gatcgagatt
     1801 gacgactcct cgcagctccg actcggcgat gtcgtgctcg cgatcggcaa tcccttcggc
     1861 gtcggccaaa ccgtgacgat gggtatcgtg tcggccaagg gtcgctccga cctcggcatc
     1921 gaggactacg aagacttcat tcagacggac gcggccatca accccggcaa ttccggcggc
     1981 gcgctcgtcg atatgaacgg caagctcgtc ggcatcaaca ccgccatcct ctcgcgcagc
     2041 ggcggctacc agggcattgg cttcgccatc cctacgaaca tggcgattcc gatcatggag
     2101 agcctcagaa agtacggcaa agtgtcgcgc ggctggctcg gcgtgtcgat tcaagacgtc
     2161 gacggcgaga tcagccaggc catgaagctg ccgaccgcgc gcggcgtctt gatcgcggac
     2221 gtgcaggcgg gctcgccggc cgccaaagcg ggtgtcctgc gcggcgacgt cgtcgagaag
     2281 gtgcaagggc gcgcggtcgc gaccacgggt gaattccgaa atgccatcgc cgcggcaggc
     2341 gcggggcaca cggtcgacct cgagctctat cgcgacggca agctccgcgt cgtccccgcc
     2401 gcgctcggcg aagccaccag cgacgcagcc ccgtccacct cgacggccca ccccgcggcg
     2461 ccgcaaggcc tggacgggct cacggtctcc gatctcaccc ccgaggctcg gcgcgccttc
     2521 agtgtcaacg acgccggcat caagggcgtg atcgtgaccg atctggcgcg caacagtccg
     2581 gcggctcgtg cgggcctgca cccgggcgac gtgctgatgg aggtgaaccg caaaccggtg
     2641 acgaccgtgc gcgagttcgc cgacgcttac ggcaaggccc gcggcaccgt gctcttgctc
     2701 gtgcaccgcc acggctcgac ggcgtacatc gtggtcaagc gttgacgggg ctgtcgtcga
     2761 gcagcgcagc gagctcggcg ctcggcaagt cgatcccgag ctcggcgagc ggcttgacga
     2821 tgtcgtcgag cacggcgctt ttcgcgagcg cgacgtagcg ctcgggctcg atccagccga
     2881 gctcgtgctc gtcgaagttc ccgaa
//
LOCUS       DATIML010000692         1960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5629691, whole genome shotgun sequence.
ACCESSION   DATIML010000692 DATIML010000000
VERSION     DATIML010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5629691"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VLJ38_11845"
     CDS             <1..451
                     /locus_tag="VLJ38_11845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40260.1"
                     /translation="VHVMVSEGRSKTQLKVLKVPEEVYVKSEAYLRHDVPDDPPLPPV
                     TSIPASPPASDVIPATPPLAGRPAAPPPPDPPSALDPAAPPRPAPGDPPPPALPPITA
                     PAPPRPPCAAPATTMPLPPPFGPLPPSPALPLDLPSLAPSLEQPTTE"
     gene            complement(623..895)
                     /locus_tag="VLJ38_11850"
     CDS             complement(623..895)
                     /locus_tag="VLJ38_11850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40261.1"
                     /translation="MRQRCELCDTLGADSRGHQLIGVAVGPRDTLLCADHALFALDAD
                     VGSLSELRELFEFVASLEPSAHEAPAASGPYSRTRRAGARASRGAA"
     gene            complement(1212..1730)
                     /locus_tag="VLJ38_11855"
     CDS             complement(1212..1730)
                     /locus_tag="VLJ38_11855"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HSU40262.1"
                     /translation="MSGKARGKGPLERADLEAVALSYLNRFDCSVSKLRTHLRQTVRR
                     RGGDQAELEAHIGVLLERYQASGLLNDTRFAENLASRLSERGGSRRAVVQKLRQRGIE
                     SGVAEASVPTTPGAELEAARAYVRRRKLGPHRPEAERLENRQRDLAALARRGFDHETA
                     IRALGYGRNDDF"
     gene            complement(1727..>1960)
                     /locus_tag="VLJ38_11860"
     CDS             complement(1727..>1960)
                     /locus_tag="VLJ38_11860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding-motility protein MglA"
                     /protein_id="HSU40263.1"
                     /translation="NLRTNLAEQGYSLEKIPYVIQYNKRDLPNVVTVEELRALINPMN
                     VPDFEANARSGTGVFDTLKAVSRLVLNELRRGG"
BASE COUNT          317 a          717 c          634 g          292 t
ORIGIN      
        1 cgtgcacgtc atggtgagcg aagggcgatc gaagacgcag ctcaaggtct tgaaggtgcc
       61 cgaagaggtg tacgtgaagt cggaggcgta cctgcggcac gacgtgccgg acgatccacc
      121 gctcccgccc gtaacgtcca taccggcctc gccgcccgct tcggacgtga ttcccgcgac
      181 tccgccgctc gctggccgcc ccgccgcgcc gccgccgccg gatccgccgt ccgcgctcga
      241 tccggccgct cctccacgac ccgcaccggg cgatccgccg ccaccagcgc tgccgcccat
      301 caccgcaccg gcaccgccgc gcccgccgtg cgccgcaccg gcgacgacca tgccgctccc
      361 gccaccgttc ggcccgctgc caccgagtcc ggcgctgccg ctcgatctgc cgtcactcgc
      421 gccgtcgctg gagcaaccga caaccgagta gaacatcagc gcagaggcgt ggatccccac
      481 tcgcaccagt ctctcgagcc accgcgccac tcgggatgat caagccagag ggtcgcgtcg
      541 cgaacaagga agggcgaacc gtcgagcgct ttgcatcgtg ggaccctggc cgttcggcag
      601 agccgtgcct cgcaagggtg cgtcaggccg cgccgcgcga cgctcgggcg cccgcacgtc
      661 gggtgcgact gtacgggccg ctcgcagctg gggcttcgtg cgcggacggt tcgagcgagg
      721 cgacgaactc gaagagctcg cgcagctcgc tgagggagcc cacgtccgcg tcgagcgcaa
      781 acaaggcgtg gtcggcgcaa agcagggtat cgcgcggccc gacggccacg ccgatgagct
      841 ggtggccgcg ggaatcggcc ccgagggtgt cgcagagctc acaacgttgg cgcatgtcgg
      901 ccaccatcga gctcccccgc gcaaagggcc aaatattcgg cttcctggcc acgcgaaagg
      961 cttcgtgata ggcctccgcc ccccgagcaa acgccatgta cctcgctacc cgttccaaga
     1021 cgcgtaagac gaaccgcaaa cgctccgtgc gcaacaaggc gaagctcgcg gccaagaacc
     1081 gcgggcgccg taaaggcctg cagaagtagc cgcttccagc atgcggggtg actcgcacgc
     1141 ggcgcgtgaa tgacggatct cggccgactg ggcggcctgt tccctccagg cgagcgccgc
     1201 ctccgcgttg ctcagaagtc gtcgtttcgg ccgtagccga gcgcgcgtat cgccgtctcg
     1261 tggtcgaaac cgcgccgggc gagcgcggcc aaatcgcgct gccgattttc gagccgctcc
     1321 gcttccggac gatgcggccc aagctttcgc cgccgcacgt acgcgcgcgc cgcttcgagc
     1381 tcggcgccgg gcgtcgtcgg aacgctcgcc tcggcgacgc cactctcgat gccacgttgg
     1441 cgcaactttt gaacgacggc gcggcgcgag ccaccgcgtt ccgacagccg gctcgcgagg
     1501 ttttcggcga agcgcgtgtc gttgagcaag ccggacgcct gataacgctc gagcaagacg
     1561 ccgatgtgcg cctcgagctc cgcttggtcg ccgccgcggc gtcgcaccgt ttgccgcaag
     1621 tgcgtgcgga gcttcgacac cgagcaatcg aaacgattca agtagctgag cgcgacggct
     1681 tcgagatcgg cccgctcgag cggccctttt ccgcgcgcct tcccgctcac ccgccgcgcc
     1741 ggagctcgtt caacacgagc ctgctcacgg ccttcagcgt gtcgaacaca ccggtgcccg
     1801 agcgcgcgtt cgcctcgaaa tccggaacgt tcatcgggtt gatcagcgcg cgcagctcct
     1861 cgacggtgac cacgttcggc aaatcgcgct tgttgtactg gatgacgtaa ggaatctttt
     1921 cgagcgaata gccctgctcg gccaggttcg tgcgcaggtt
//
LOCUS       DATIML010000693         6965 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1588471, whole genome shotgun sequence.
ACCESSION   DATIML010000693 DATIML010000000
VERSION     DATIML010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6965
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1588471"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..153
                     /locus_tag="VLJ38_11865"
                     /pseudo
     CDS             13..153
                     /locus_tag="VLJ38_11865"
                     /inference="COORDINATES: protein motif:HMM:NF024770.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
     gene            complement(141..848)
                     /locus_tag="VLJ38_11870"
     CDS             complement(141..848)
                     /locus_tag="VLJ38_11870"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSU40264.1"
                     /translation="MQTKRAPVIGVLTPFTGGFYYGAAMAGIERVTHARGATVVALQT
                     TGQEFAADDAPDSQYLGLEAVDGWLAVNQFEAPAFTARIRARGVPLVHVNSRPETPGG
                     SSILPDNDTSMRAAVRHLIEHGHRRIAFAGFLGQVDLRERYEAYLAALGEGGLEIDPA
                     LLFESPANFELDGEELAQRILAAGVPCTAIVAGTDRLALGNERLGSYSALQPQDCRGT
                     NVVGTRKTCGNGVPQRR"
     gene            complement(973..1722)
                     /locus_tag="VLJ38_11875"
     CDS             complement(973..1722)
                     /locus_tag="VLJ38_11875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40265.1"
                     /translation="MSKWRSGEVLRLFLSAALLLAGCGGESARHGAPASDGGATSGMS
                     TTGGAGGSDGSSIANGGTLPSDAGGSGALGGSSAGSSGSMPALPCSNVTCPSIPTSCK
                     RIVQAADACCPTCLDTGCDVCPALDCAEGTHTETVPGDCCPSCVADPPDACATGQQVY
                     ADVRAMLLDKYGSSGCSNSTDCTFVSESNACSVTCGVALPLSTAQDFTQTLGSLLTGC
                     ATCPAPSELVCKGYVAGCLNGLCAILHPISR"
     gene            complement(1774..2775)
                     /locus_tag="VLJ38_11880"
     CDS             complement(1774..2775)
                     /locus_tag="VLJ38_11880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40266.1"
                     /translation="MFAKRPPLLLAFAGGCLSGAALILSGVGAVSLWRGGTPAISSPH
                     GNGDRNEDVVEARVAAVPVGTRERTLGVAKTSIAAEELAHGPAAAHASDEASAEHPSD
                     SGSSVADVLTRLEAAYRQGLVDGARANANHAEPADPGTGAAEPANAAGPHDVPAREQS
                     AATAVGNSPVVVTAAPTAPPAPSQPTVIAVPAPPITVAVITPPADVAPAYPPQALGAG
                     AAPAAATPEPAQSHDGTASVTQNIHIDNLHQGDVYQQLAVMQYMQLFAGSPYGAYGGY
                     APAPAVPAHHHSTPTSSPFSTPALPVAAPPFPSFLTSLTNPANPYPLPQRHVGRAFR"
     gene            complement(2867..3061)
                     /locus_tag="VLJ38_11885"
     CDS             complement(2867..3061)
                     /locus_tag="VLJ38_11885"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSU40267.1"
                     /translation="MNVARSRRCSRPEKAGRAPFALDNGVTQAELVEVITHLAFYVGW
                     PSAVSAVNRAKALFAERDSK"
     gene            complement(3024..4040)
                     /locus_tag="VLJ38_11890"
     CDS             complement(3024..4040)
                     /locus_tag="VLJ38_11890"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HSU40268.1"
                     /translation="MQGAVLYGPRDVRYEERAMPGLNAPTDAILRLSATCICGSDLWP
                     YRGANPTNGPTAMGHEYCGIVEEVGRAVTSVKPGEFVIGSFFASDNTCPHCRAGYQTS
                     CEHRQIIGGAQAPFLRVPLADGTLVATSEVPPPELVPHLLAASDVLGTGWFAADAANV
                     KPGSTVVVVGDGAVGLLAVLSAKHLGAERIFAMSRHPARQKLAREFGATDVISERGDA
                     GIARIKELTRGVGADAVLECVGTQESMQQAIGAARPGGYVSYVGVPHGVSLDGQNLFF
                     RHVHLHGGPAPVRRYLPALIDLIWQRTLEPGKVFDLTLPLAEVAEGYRAMDERRAIKT
                     LLTT"
     gene            4292..5605
                     /locus_tag="VLJ38_11895"
     CDS             4292..5605
                     /locus_tag="VLJ38_11895"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HSU40269.1"
                     /translation="MEQYQQAWGPVLLGAALLFLVWGVVGRKRAKTPSMPARPEGTSE
                     RAAAPQKPAAAKERPAPAKEHPVVAAAKERSAASKEPSAPDATKTASVPPKKPARRTT
                     ALVWEVPQVGQADDEDITVLRAIPVFDDQADVTIEGQPPAEPGESEPEEDRVSRVEMS
                     YEEGAEPDEMTGSSARILLYAGGDSDQGRVRPRNEDSLLMMPERSLFAIADGMGGHRG
                     GEIASSIAIDTLRDAFFRSTFDARLHVENDVPRRAKELATAVQMSNECVRSMAMADRE
                     LSDMGTTLVAARFSPNKQRLYIGHVGDSRCYRLRRGVFRQLTTDHTMASLGMKGPRSK
                     DLYQAVGVSPDLTIDMIVDKPQDDDVYLLCSDGLSKMMSDDEVRDVLVEHQDLESALY
                     TLIEIANDRGGKDNVTVIIVKVLAHNSKKIEILAELGAKNASGAS"
     gene            complement(5634..6503)
                     /locus_tag="VLJ38_11900"
     CDS             complement(5634..6503)
                     /locus_tag="VLJ38_11900"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSU40270.1"
                     /translation="MTAGSATAPEALLDPFTAKTFLAVAEAGSISAGARRVFRTQSTA
                     STQIRLLEEQLGARLFDRDTRSLALTAEGERFLAYARRLLAANVEALSALRSKAPTPP
                     LRLGFSDYFQPEHVATLVRRVSSEWPDCRFELRIGQSSALEREFEARRLDLVVSAKLE
                     RRERAGAEPVHWVARADFAAPLRGELPLVLLPATCALHQVALKALDHHGTACRVAVIA
                     SGVTGVHAALRGGLGLGCLNASAIPADLAVRRDPRLPDLPRLRFLWRARRGTLAADVA
                     ASLGAGALRVEPK"
     gene            6612..>6965
                     /locus_tag="VLJ38_11905"
     CDS             6612..>6965
                     /locus_tag="VLJ38_11905"
                     /inference="COORDINATES: protein motif:HMM:NF025903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HSU40271.1"
                     /translation="MPLVEIYVSEQRSGAERKQLADAVHRALVETIGIPVDDRFQIVR
                     ALAREDYIADANYFDLARSDDFLVVRVTLRRGRSPDKKQALYRAIADGAARAVGMHRE
                     DVLVVLHENDAIDWSF"
BASE COUNT         1184 a         2324 c         2379 g         1078 t
ORIGIN      
        1 gccggtctcg cggtgcccaa ggacctggcg ctcgtcggct tcgacgacat cgagcgggct
       61 cagctggtcg acccgccact caccacggtg cgccaaaatt tcgcgctcgt gaccgcgacc
      121 gccaccgcga cgctgctcga tcacctcctc tgcggcacgc cgttgccgca ggtcttgcgc
      181 gtgccgacga cgttcgtccc ccggcaatct tgcggctgca aggcggagta cgacccgagc
      241 ctctcgtttc cgagcgcgag gcgatcggtt cccgcgacga tcgccgtgca cggcacgccc
      301 gccgcgagga tacgctgggc gagctcttcg ccgtcgagct cgaaattcgc cgggctttcg
      361 aagagcagcg ccggatcgat ttcgagcccg ccttcgccga gcgccgcgag gtacgcctcg
      421 taacgctcgc gtaagtccac ttggccgagg aaacccgcga acgcgatgcg gcgatgcccg
      481 tgctcgatca ggtggcgcac ggcggcgcgc atgctcgtgt cgttgtcggg caaaatgctc
      541 gagccgccag gagtttcggg ccggctgttc acgtggacga gcggcacgcc gcgcgctcga
      601 atgcgcgccg tgaatgccgg cgcctcgaat tgattgaccg cgagccagcc gtcgacggcc
      661 tcgagtccca aatactgact gtcaggggcg tcgtccgccg cgaactcttg tcccgtcgtc
      721 tgcagcgcga cgaccgtcgc tccacgcgcg tgtgtgacac gctcgatgcc cgccatcgcc
      781 gcgccgtagt agaagccgcc cgtgaagggg gtgagtacgc cgatcaccgg ggcgcgcttc
      841 gtctgcatat caacagacaa gcgttacacg agattggcac ggacacccgc ggactcgcga
      901 atgctcgaaa cacacgagtg taggcgcgcg gccgggtcgc acctacaacc tgcgcaatgc
      961 ggacgcaggc gtttacctgc taattgggtg caaaatcgca cagagcccgt tcaggcaacc
     1021 agcgacgtag cctttgcaaa ccagctcgct cggagccggg cacgttgcac accccgtcag
     1081 gaggctgccg agagtttgcg tgaagtcctg tgcggtcgag agcggcagcg ccacgccgca
     1141 agtcacgcta caggcgttgc tttcggagac gaacgtgcaa tcggtgctgt tcgagcagcc
     1201 gctcgagccg tacttgtcga gcagcatcgc gcgcacatcg gcgtagacct gctgccccgt
     1261 ggcgcacgcg tccggcggat cggcgacgca gctcgggcag cagtcacctg gcacggtttc
     1321 ggtatgcgtg ccctcggcgc agtcgagcgc gggacacacg tcgcagccgg tatcgagaca
     1381 ggtcgggcaa cacgcgtcgg ctgcttgaac gatgcgcttg cagctggtcg ggatggacgg
     1441 acaggtgacg ttgctgcacg gtaaggcggg catcgagccg ctgctgccgg cgctcgagcc
     1501 gccgagcgcg ccgctgcccc ccgcgtcaga cggcagcgtc ccgccgttag cgatcgacga
     1561 accatcgcta ccaccggcgc cgcccgtcgt ggacatgccg ctggtcgcac cgccgtcgct
     1621 ggccggcgcg ccgtggcgcg cggattcacc gccgcagccc gcgagcagga gcgccgcgct
     1681 caggaataaa cgaaggacct caccagagcg ccacttcgac acgcgcgaag cttgatcctc
     1741 agcgcagagc gcgtccaccg tgctcgtcgc ccgctaccga aacgcgcggc cgacgtgacg
     1801 ctggggcagc ggatacggat tggccgggtt cgtgagcgac gtcagaaatg aggggaaagg
     1861 aggtgcggcg accggcagcg ccggggtcga aaagggcgag gacgtcggcg tcgaatgatg
     1921 atgagccggc accgcgggag caggagcgta gcccccgtac gcgccgtacg gcgaacccgc
     1981 gaacagctgc atgtactgca tcaccgcgag ctgttgatac acgtctccct gatgcaagtt
     2041 gtcgatatgg atgttctgcg tcacgctcgc ggtgccgtcg tgcgattgag ccggctccgg
     2101 cgtcgctgcg gccggtgctg ctccggcgcc tagcgcctgc ggcggatatg cgggagcgac
     2161 atccgccggt ggagtgatga cggcgacggt gatcggcggg gccggcacgg cgatcaccgt
     2221 cggctgcgag ggtgctggcg gcgccgttgg agcggccgtc acgacgaccg gcgagttgcc
     2281 gacggcagtc gcggctgatt gttcgcgagc gggaacgtcg tgcggacctg ctgcgttagc
     2341 cggctcggca gcgcccgttc ccggatccgc gggttcagcg tgattggcgt tcgcgcgggc
     2401 gccgtccacg agtccctggc ggtacgcggc ttcgaggcgc gtcaacacgt cggcgacgga
     2461 actcccggaa tcgctcgggt gctcggcact cgcctcatcg cttgcgtgcg cggcggcggg
     2521 gccgtgcgcg agctcctcgg cagcgatgct cgtcttggca acgccgagcg ttcgttcgcg
     2581 cgtgcccacc ggcacggcgg cgacgcgagc ttcgacgacg tcttcgtttc gatcgccgtt
     2641 gccgtgcgga ctcgaaatcg ccggcgtccc tccgcgccag aggctgaccg cgccgacgcc
     2701 gctcaggatc agcgccgcgc cgctgagaca gccccccgcg aaagcgagga gcagaggggg
     2761 ccgcttcgcg aacatcgagc cgactctagc acgtcggccg ggggttcggt cgcggccggc
     2821 gcgagcctca ggggtgagct cgtgccgtgg ctcgatcgtg acgaaattac ttgctgtccc
     2881 gctcggcgaa cagcgctttg gcgcgattga ccgccgacac ggcgctcggc caaccgacgt
     2941 aaaacgcgag gtgcgtgatc acctcgacga gctccgcctg cgtgacgcca ttgtcgagcg
     3001 cgaacggtgc ccttccggct ttctcaggtc gtgagcaacg tcttgatcgc gcgacgttca
     3061 tccatcgcgc ggtagccttc ggccacttcg gcgagtggca acgtcaagtc gaagaccttc
     3121 ccgggctcga gcgtacgttg ccaaatcagg tcgatcagcg cgggcagata gcggcgcacg
     3181 ggggcaggtc cgccgtgcag gtgtacgtgc cggaaaaaca aattttgccc gtcgagtgag
     3241 acgccgtgcg gcacgccgac ataactcacg tagccgcccg gtcgtgccgc cccgatcgcc
     3301 tgctgcatcg actcctgcgt cccgacgcat tcgagcacgg cgtccgcacc gacgcctcgc
     3361 gtgagctcct tgatgcgcgc gatgccggcg tccccgcgct cggagatcac gtcggtcgcg
     3421 ccgaactccc gcgcgagctt ttggcgcgcc gggtgccgac tcatcgcgaa aatccgctct
     3481 gcgcccagat gtttcgcgga gagcacggcg agcaggccca cggcgccgtc acccacgacc
     3541 acgacggtcg agcccggctt gacgttggcc gcgtcggccg caaaccagcc ggtgccgaga
     3601 acgtcggaag cggcgagcag atgcgggacg agctcgggcg gaggcacttc gctcgtcgcg
     3661 acgagcgtgc cgtcggcgag tggcacgcgt agaaacggcg cctgggcgcc cccgatgatt
     3721 tgtcgatgct cgcacgacgt ctggtaaccc gcgcggcagt gagggcacgt gttgtcggac
     3781 gcgaagaacg agccgatcac gaactctccc ggcttcaccg acgtgaccgc gcgacccacc
     3841 tcctcgacga tgccgcagta ttcgtggccc atcgccgtcg ggccgttcgt cgggttcgcg
     3901 ccccggtacg gccacaaatc ggaaccgcag atacacgtcg ccgacagccg caaaatcgcg
     3961 tcggtcggcg cgttcagccc cggcattgcg cgctcttcgt agcgcacgtc gcgtggaccg
     4021 tagaggactg ctccctgcat gactctttac tcccgtactg gtgttccgtc gctgggcctg
     4081 gcgtgcacga atcgaaccaa gcttgccgtc gagcgtgcag ctcagcgtgg agccggaggc
     4141 gctcgcggac atgtgaacag aggtgagtgc ctggatggcg gtgtgctcca aacggcgcgg
     4201 gcgcgctacg aaatgcgggc tcctttatcc gccgcgcgcc gcgttggctg gggagactca
     4261 cccccagtaa cgatgataga ctggatgaaa cgtggagcaa tatcagcaag cttggggccc
     4321 agtgttgctc ggcgccgccc tgctcttcct tgtctggggt gtcgtcggtc ggaagcgcgc
     4381 aaaaacgccc agcatgccgg cgcgcccgga aggtacgagc gaacgcgctg ccgcgccgca
     4441 aaagccagca gccgcgaagg agcgccccgc accagcgaag gagcatccgg tcgtggcggc
     4501 cgccaaggag cgttcggccg cctcgaagga gccgtccgct ccagacgcga cgaagaccgc
     4561 atcggttccg ccgaaaaagc cagcacggcg cacgacggcg ctcgtctggg aagtgccgca
     4621 agtcggtcaa gcggacgacg aagacatcac ggtgctgcgc gcgattcccg tgttcgacga
     4681 tcaagcggac gtgacgatcg aaggacagcc ccccgccgag ccgggcgaga gcgagcccga
     4741 ggaagaccgc gtttcgcgcg tcgaaatgag ctatgaggag ggcgccgagc ccgacgagat
     4801 gacgggctct tccgcgcgga ttctcctcta cgcgggcggc gatagcgatc agggacgcgt
     4861 gcgcccccgc aacgaagaca gcttgctcat gatgccggag cgttcactgt tcgcgatcgc
     4921 ggacggcatg ggcgggcacc ggggcggcga aattgcgagc agcatcgcga tcgacacgct
     4981 gcgcgacgcc ttcttccgct cgactttcga cgcgcgcttg cacgtcgaaa acgacgtgcc
     5041 ccggcgtgcc aaagagctcg cgacggccgt gcagatgtcg aacgagtgtg tgcgctcgat
     5101 ggcgatggcc gatcgcgagt tgtcggacat gggcacgacg ctcgtcgcgg cgcggttctc
     5161 gccgaacaaa cagcgcctgt acatcggaca cgtcggggac agccgctgct accgcttgcg
     5221 acgaggggtg ttccgtcagc tcacgaccga ccacacgatg gcctcgctcg gtatgaaagg
     5281 tccgcgctcg aaggatctgt atcaggccgt cggcgtgagc cccgatctca cgatcgacat
     5341 gatcgtcgac aagccgcaag acgacgacgt gtacctgctc tgttcggacg gcttgtccaa
     5401 gatgatgagc gacgacgaag tgcgcgacgt actcgtcgag catcaggatc tcgagagcgc
     5461 gctctacacc ttgatcgaga tcgccaacga tcgcggcggc aaggacaacg tgaccgtgat
     5521 catcgtcaaa gtcctcgccc acaactcgaa gaagatcgaa attttggccg agctcggcgc
     5581 gaagaacgcg agcggcgcgt cgtagtaacg cttccctcgg ctaatccagc cgactacttg
     5641 ggttcgacgc gcagcgctcc cgcgccgagg gacgcggcga cgtcggcggc gagggtgccg
     5701 cggcgggcgc gccaaagaaa gcgcaggcgc ggcaggtctg gcagccgcgg atcgcggcgt
     5761 acggcgaggt cggccgggat cgcgctcgcg ttcaggcaac cgagcccgag gccgccacgc
     5821 aacgccgcat gcacccccgt gacgccgctc gcgatcacgg ccacgcggca ggccgtgccg
     5881 tggtggtcga gcgccttcag cgcgacttgg tgcagcgcgc atgtcgccgg caacagcacg
     5941 agcggcagtt cgccccgcag cggcgccgcg aaatcggccc gcgcgaccca atggacgggc
     6001 tcggcgcccg cgcgctctcg acgctcgagc ttggcgctga cgaccaaatc gagccgccgt
     6061 gcctcgaact cccgctcgag ggcgctcgat tggccgatgc gcaactcgaa gcggcagtcg
     6121 ggccactcgc tcgaaacgcg gcgcacgagc gtcgcgacgt gctcgggctg gaagtaatcg
     6181 ctgaacccta gccgcagcgg cggagtcgga gctttcgagc gcaacgcgga gagcgcctcg
     6241 acgttcgcag ccagcagccg ccgcgcgtac gcgaggaagc gctcgccctc ggccgtgagc
     6301 gcgagcgagc gcgtatcgcg atcgaacagg cgcgcgccga gctgctcttc gagcagccgg
     6361 atctgggtgc tcgccgtcga ttgcgtgcgg aacacgcgtc gcgcgccggc cgaaatgctc
     6421 ccggcttcgg ccacggcgag aaatgtcttc gccgtgaagg gatcgagtaa ggcctccggg
     6481 gcggtcgcgc tgccggcagt catcggaatt gccgatgatt gtagttgaaa ttattcgttt
     6541 ctcaaatagt gccggcgtcg ttacttttga cggcgtcggg cccatacgaa atggctcgag
     6601 caggagcagg gatgccgctc gtcgaaatat acgtgtccga acagcgctcg ggtgcagagc
     6661 gaaagcagct cgccgacgcc gtgcaccgag ccttggtcga gaccatcggg atcccggtgg
     6721 acgatcgctt ccaaatcgtg cgcgcgctcg cgcgcgagga ctacatcgcc gatgccaact
     6781 actttgacct cgcgcgcagc gacgacttcc tggtcgtgag ggtcaccttg cgtcgcggcc
     6841 gcagtcccga caagaagcag gcgctctacc gggcgatcgc ggacggcgct gcgcgcgccg
     6901 tgggcatgca ccgcgaggac gtgctcgtcg tacttcacga aaatgacgct atcgattggt
     6961 cgttc
//
LOCUS       DATIML010000694         1674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5629897, whole genome shotgun sequence.
ACCESSION   DATIML010000694 DATIML010000000
VERSION     DATIML010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5629897"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1650)
                     /locus_tag="VLJ38_11910"
     CDS             complement(<1..1650)
                     /locus_tag="VLJ38_11910"
                     /inference="COORDINATES: protein motif:HMM:NF023454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3516 domain-containing protein"
                     /protein_id="HSU40272.1"
                     /translation="MMTGDATVNRDASVICCTAEILANIALGQGEHADVDYVVMDEFH
                     YFSDKDRGVAWQIPLLTLPHSRFVLMSATLGDVSAFESLLERQTGIDVVTVRSGKRPV
                     PLEFEYQEKLLQEATHTLVEKGRAPVYVVSFTQRGAAEAAQSLLSLDYCTKEEKKELA
                     EAMRGESFRSPYGKEVQKLLRHGIGLHHAGLLPRYRLLVEKLCQRGLLKIVCGTDTLG
                     VGVNVPIRTVLFTKLCKYDGEKVRLLSVRDFQQIAGRAGRKGFDERGFVVALAPEHAV
                     ENLKLEAKSKDGHKKKFVRKKPPEWGYVPWDKATFERLATGEPEPLVSRFQVTHGMLL
                     AVLGRPEGGCRAMKDLVRESLEPPANQRRHRDHALALLRSLWQAGIVEFRSAAEGGGI
                     RLHAELQEGFSILQALGLFVVDAIERLSKESPSYALDVLGLVEAVVEDPEVILRAQVD
                     KLKTEKLAELKAAGVEYDERMAELEKIEHPKPNAEFLNTAFAAFAADHPWVVRENLKP
                     KSVAREVVESLTPFGSYVKEYGLLRSEGLLLRYLSEVYKTLV"
BASE COUNT          271 a          556 c          543 g          304 t
ORIGIN      
        1 aacgagggtt ttgtacacct cggagaggta gcgcaagagc agcccctcgg agcgcaacag
       61 gccgtactct ttgacgtagc tgccgaacgg cgtgagcgac tccacgactt cgcgcgccac
      121 cgatttcggc ttcaggtttt cgcgcacgac ccacggatga tcggccgcaa aggccgcaaa
      181 cgccgtgttc aagaactccg cgttcggctt gggatgctcg atcttctcga gctcggccat
      241 gcgctcgtcg tactcgacgc cggccgcctt gagctcggcg agcttctccg tcttgagctt
      301 gtcgacttga gcgcggagga tcacctcggg atcctcgacc accgcttcta cgaggccgag
      361 cacgtcgagc gcgtagctcg gactctcctt ggacaggcgc tcgatggcgt cgacgacgaa
      421 gagccccaac gcctggagga tcgaaaaacc ctcctgcagc tcggcgtgca agcggatgcc
      481 gccgccctcg gccgcgctcc ggaattcgac gatgccggct tgccagagcg agcgcaagag
      541 cgcgagggcg tggtcgcgat ggcggcgctg attcgccggc ggctcgaggc tctcgcgcac
      601 gaggtccttc atcgcccgac agccgccctc gggacgaccg agcaccgcga gcaacatgcc
      661 gtgcgtcacc tgaaagcgcg agacgagcgg ctcgggctca cccgtcgcga gccgctcgaa
      721 cgtcgccttg tcccatggca cgtagcccca ttcgggcggc ttcttgcgca cgaatttctt
      781 cttgtggccg tccttggact tcgcctcgag cttcaggttc tcgaccgcgt gctcgggcgc
      841 gagcgccacc acgaaaccgc gttcgtcgaa acccttacgc cccgcgcgcc cggcgatttg
      901 ctgaaaatca cggacgctga gcaggcgcac cttctcgccg tcgtacttgc agagcttggt
      961 gaagagcacg gtgcggatcg gcacgttcac gccgacgccg agcgtgtcgg tgccgcagac
     1021 gatcttgagt aagccgcgct ggcacagctt ttcgacgagc aggcggtagc ggggcaagag
     1081 gcccgcgtgg tgcaggccga tgccgtggcg caggagcttc tgcacctcct tgccgtaggg
     1141 gctgcggaag ctctcgccgc gcatggcctc ggcgagctcc ttcttttctt ctttcgtgca
     1201 gtaatcgagg ctgagcaggc tctgcgcggc ttcggcggcg ccgcgctgcg tgaaactcac
     1261 gacgtagacg ggcgcgcggc ccttctcgac gagcgtgtgc gtcgcctcct gcaggagctt
     1321 ctcttggtat tcgaactcga gcggcaccgg gcgtttgccc gagcgcacgg tgacgacgtc
     1381 gataccggtt tgtcgctcga gcagcgactc gaacgcgctc acgtcgccga gcgtcgcgct
     1441 catcagcacg aagcggctgt gcggcaaagt gagtagcggg atctgccacg cgaccccgcg
     1501 gtccttgtcg gagaagtagt gaaactcgtc catcacgacg tagtcgacat cggcgtgctc
     1561 gccttgcccg agcgcgatgt tggccaaaat ttcggccgtg cagcagatga cgctggcgtc
     1621 gcgattgacc gtggcgtcgc cggtcatcat gccgacgcgt tcgggcccga gctc
//
LOCUS       DATIML010000695         4931 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5630152, whole genome shotgun sequence.
ACCESSION   DATIML010000695 DATIML010000000
VERSION     DATIML010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4931
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5630152"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1018
                     /locus_tag="VLJ38_11915"
     CDS             <1..1018
                     /locus_tag="VLJ38_11915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40273.1"
                     /translation="WSFLTEEHFWAADAGVPAAQAVGRMTFLLETALSESLLSLQDVM
                     DGITFETISARLPLKELQRVVKFALEAGRKKAPLTEENLLEVVPLKDLLGHIPLDHVY
                     KRVLMAKLAQPAGFVGSGVGEEAWPEDEPADLGEEAVRAASGQKEPEKASEAKRGAPP
                     KPAKTDAKEAEETVTDDELEEVPIPSANAGSTRPPAEEEARRKVADRLAAINRLPPRH
                     NDLSTPILLSIESMYAELLTAPTDEAREMCIRDSFPNEAHLSTALLALIELLDPSIDV
                     NDPVIRDADAESLIKVVLFEERRRYEQANPSGRGPAAPPPGSKRSVPPPLPGARNGDE
                     KRIR"
     gene            complement(1119..1202)
                     /locus_tag="VLJ38_11920"
     tRNA            complement(1119..1202)
                     /locus_tag="VLJ38_11920"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1166..1168),aa:Leu,seq:cag)
     gene            complement(1249..>4931)
                     /locus_tag="VLJ38_11925"
     CDS             complement(1249..>4931)
                     /locus_tag="VLJ38_11925"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40274.1"
                     /translation="LVPGYAPSFKALERLLVQAHKHEALVELYERAVDLAPDAESKIT
                     WLFKIGRLQEDALGEPARAMTAFRRILDVDGQHLGAIHALQRAAERAGRFKELIAALE
                     LEVARVSDKRRRLELLHRAGEVAELELADEAQALAFYRKAFEIDRGYSPALAGLGRLH
                     YKAGRWDALLETYRAELEYTATGPGSAALHYKVGELYEQRIGREDEALAAYRRALAAD
                     PRHRPSIRALERKLGERGRFDDLARLLEGEVAAAAEPYDKARAAFRVGEIYENRLKQA
                     DKARAAYEQALAADPELRPAREGLIRLLTLGREFKRVAVELEQQVKMEQDPALAVSAL
                     LRQGEVCRDELGDPVRAVACFEAVLERDPAHVEALIALEPLYVEQAAWDALARLYATE
                     ARVLSDAGARIAVLRELARLEERRAGDELGRVRDAEMTVLQLAPSDPTALAALERLAL
                     RAGDPSLIGQVDAQLANAEHPGIAAEHTTRLAELLEASGDASALGLYRAALAREADNL
                     GAARGLSRMAERLGDPKLLEEAASRMVAVGLDRPYAARLLLRAAEVQSNAVDRSGAAS
                     LLEAALEVSPENELAALRLEQLLVATGEVDRAVRVLSQAATEASERERSAALWIRVAE
                     LHAERRRDLQAALAVLHRALGLLPAHVGVLMKLAELFVRDGQWTEAVDRLKQVTAQPQ
                     APEAARLDAHARLAAILDERLGDADRARASVEAVLAANPRHAAALGRLVQLELRRGRL
                     DAASDAASRLVQISEEPEDRVEALAAQGRVEKARGRLGAAAQAFVEAIAIGGLDTDAA
                     RELVELVNQVPRKPDAPGWDVYAAALARHLDVAGDAAPPAAFLELARVYRDCLHRPEQ
                     ALQVLERGAAQNDDAELHAEFAGRTLEAGNPTKAIQALRRVLERDVANALAWRKLAEC
                     FKALGRRTEATLATAPLAALGQANDLELATLSQSPPRPATAPARSFDLAELESISLVP
                     PGDPVARLVGALSEVLEKVYPPELERYGVSARDRLGARSTHALRTLADRVAAIFGVNE
                     FDLYLHQMPAVALELEFTDPVSILVPPFAQKLGESGQVFVLARAFAQIARKLHPVERL
                     GPDALELLLAGAARVVDGGFPAPLRAGEDSVTALAKRVSRALPWLGRGSIEDAARAYA
                     SSPSVDFNDWCLRARMSAARAAVLVSDDLPAAVLVTRQTEGVLSGAQGAALALGTRLT
                     RDLLSFWLSDGALAVRRRLGVL"
BASE COUNT          765 a         1725 c         1742 g          699 t
ORIGIN      
        1 ctggtcgttc ctcaccgagg agcacttctg ggctgccgac gccggagtcc ctgcggcgca
       61 agcggtggga cgcatgacgt ttctcctgga aaccgcgcta tccgagtcgc tgctttcgct
      121 gcaggacgtg atggacggca ttaccttcga aacgatttcg gcccggttgc cgctcaaaga
      181 actccagcgc gtcgtgaagt tcgcgctcga agcggggcgg aagaaggcgc cgctcaccga
      241 ggagaacctg ctcgaggtcg tgccgttgaa ggacctgctc gggcacattc cgctcgacca
      301 cgtctacaag cgtgtgctga tggcgaagct cgctcaaccc gccgggttcg tcggctccgg
      361 cgtgggtgag gaagcatggc cagaggacga gcccgccgac ctgggtgaag aggccgtgcg
      421 ggctgcgtcc gggcagaagg aaccggagaa agcctccgag gccaagcgcg gcgcgccacc
      481 aaagcccgcg aagacggacg ccaaagaggc ggaagagacc gtcacggacg acgagctcga
      541 ggaagtgccg atcccgagcg ccaacgcggg cagcacacgc ccaccggcgg aagaagaagc
      601 gcggcgcaaa gtcgccgatc gcctcgcggc catcaatcgc ctgcccccgc gtcacaacga
      661 tctgtcgacg ccgattttgc tctcgatcga gagcatgtac gccgagcttc tcacggcgcc
      721 gaccgacgag gcgcgcgaga tgtgcatccg tgattcgttt ccgaacgaag cgcacctctc
      781 gaccgcattg ctcgccctca tcgagctgct cgatccgagc atcgacgtga acgacccggt
      841 gattcgcgac gccgacgcgg agtcgctcat caaggtggtc ctgttcgaag agcgacgccg
      901 ctacgagcag gcaaacccga gcggccgcgg cccggcggcg ccgccacccg gaagtaagcg
      961 ttccgtaccc ccgccgctgc ccggcgctcg caacggcgac gaaaaacgca ttcgctgacc
     1021 gagccgcgca ctcgaacgga gtcggtcgta ctcaccggcg cacggagctc cgtgcgccgg
     1081 tcgcgttttg tgcctcgaac gctcagtgct gcgaggagtg ccgacggagg gacttgaacc
     1141 cccatgacct tgcggtcgcg tggacctgaa ccacgtgcgt ctgccaattc cgccacgtcg
     1201 gcatggtggg cgcctcttct agccggcagc gccgcgctcg gcaagggctc agagcacgcc
     1261 gagtcgccgc cgaaccgcga gcgccccgtc gctcaaccaa aacgacaaaa gatcgcgcgt
     1321 cagccgcgta ccgagcgcga gggctgcacc ctgggccccc gagagaacgc cctccgtctg
     1381 gcgggtcacc aggacggcag cgggcagatc gtcggacacg agtacggcgg cgcgcgcggc
     1441 gctcatgcgt gcccggaggc accagtcgtt gaaatcgacg ctcggtgagg aggcataggc
     1501 gcgagccgcg tcctcgatcg agccccgacc gagccacggc agcgcgcgcg agacacgctt
     1561 ggcgagcgcc gtgaccgagt cctcccccgc gcgcagcggc gccggaaatc cgccgtccac
     1621 gacgcgcgcg gcgccggcga gcaagagctc gagagcgtcg ggaccgagcc gctccacggg
     1681 gtgcagtttg cgggcgattt gcgcaaacgc gcgcgccagc acgaacacct gccccgactc
     1741 accgagcttt tgggcaaagg gcggcacgag gatcgagacc ggatcggtga actcgagctc
     1801 gagcgccacc gcgggcatct ggtgcaggta gaggtcgaac tcattgacgc cgaaaatcgc
     1861 cgccacgcga tcggccagcg tgcgcagcgc gtgcgtcgag cgggcgccga gccggtcgcg
     1921 agcactcacg ccgtagcgct cgagctcggg cggatacacc ttctcgagca cttcggagag
     1981 cgcgccgacg agtcgcgcga cgggatcccc cggcggaacg agcgagatgc tctcgagctc
     2041 ggcgaggtcg aacgagcgtg ccggcgcggt ggccgggcgc ggcgggctct gcgagagggt
     2101 cgcgagctcg aggtcattgg cttggccgag ggcggcgagc ggcgccgtcg ccaacgtggc
     2161 ttccgtgcgg cgcccgagcg ccttgaagca ctccgcgagc ttacgccacg cgagcgcgtt
     2221 cgcgacatcg cgctcgagca cgcgcctgag cgcttgaatc gccttggtgg gattacccgc
     2281 ctcgagcgtg cggccggcga attcggcgtg gagctcggcg tcgtcattct gcgccgcgcc
     2341 gcgctcgagg acctgcagcg cttgctcggg gcggtgcaag caatcgcggt agacgcgcgc
     2401 gagttcgagg aaggcggcgg ggggagcggc gtcgcccgcc acgtcgagat gccgcgcgag
     2461 cgccgcggcg taaacgtccc agcctggcgc gtccggcttg cggggcactt gattgacgag
     2521 ctccacgagc tcgcgcgccg catcggtgtc gagcccgccg atggcgatcg cctcgacgaa
     2581 ggcttgagcg gcggcgccga gccggccgcg tgctttttcg acgcgacctt gggccgcgag
     2641 cgcttccacg cgatcttcgg gttcttcgga gatttgcacc aggcgagaag cggcgtcgct
     2701 cgccgcgtcg aggcggccgc gccggagctc gagctgcacg agccggccga gtgcggcggc
     2761 atgtctcggg ttggccgcga gcacggcttc gacgctcgcg cgcgcccggt cggcgtcgcc
     2821 gagccgctcg tccaggatcg cggcgagccg cgcgtgtgcg tcgagccgcg cggcttccgg
     2881 cgcctgcggc tgagccgtca cttgtttcaa ccgatcgacg gcctccgtcc attggccatc
     2941 ccgcacgaag agctcggcaa gcttcatcag cacgccgacg tgcgccggca aaagaccgag
     3001 cgcgcggtgc agcacggcca gcgccgcctg cagatcgcgg cgccgctcgg cgtgcagctc
     3061 ggcgacacgg atccaaagcg ctgcgctgcg ctcgcgttcg ctcgcttcgg tggcggcctg
     3121 cgacagcacg cgcacggcgc gatccacctc gcccgttgcg acgagcaact gttcgagcct
     3181 gagcgcggcg agctcgtttt cggggctcac ctcgagcgcc gcctcgagca gcgacgcggc
     3241 gccgctgcga tcgaccgcgt tcgactgcac ttccgccgcc cgcaagagca gccgcgcggc
     3301 gtagggccga tcgagcccca cggccaccat gcgcgacgcc gcttcctcga gcagcttcgg
     3361 gtcgccgagc cgctcggcca tgcgcgaaag accgcgcgcc gcgcccaggt tgtccgcttc
     3421 ccgcgcgagc gcagcgcggt agagcccgag cgccgaggcg tcgccgctcg cttcgagtag
     3481 ctcggcgaga cgtgtcgtgt gttcggcggc gatgcccggg tgctcggcgt tcgccagctg
     3541 cgcatcgact tgtccgatga gcgacggatc gcccgcgcgc agggccagcc gctcgagcgc
     3601 ggcgagcgcc gtgggatccg agggagcgag ctggagcacg gtcatttcgg cgtcgcgaac
     3661 gcggccgagc tcgtcgcccg cgcgtcgctc ttcgagccgc gcgagctccc gcagcaccgc
     3721 gatgcgcgcg ccggcgtccg agagcacgcg ggcctcggtc gcgtagagtc gcgcgagcgc
     3781 gtcccacgcc gcctgctcga cgtagagcgg ctcgagtgcg atgagcgcct cgacgtgagc
     3841 cggatcgcgc tcgagcaccg cctcgaagca cgccaccgcg cgcaccggat cgccgagctc
     3901 gtcgcggcac acctcgccct gccgcaagag cgccgacacg gcgagcgcgg gatcttgttc
     3961 catcttcact tgctgctcga gctcgaccgc gacgcgcttg aactcgcgcc cgagcgtgag
     4021 caggcggatc aagccctcac gtgcgggccg gagctcaggg tcggcggcga gcgcctgctc
     4081 gtacgcggcg cgcgccttat cggcttgttt caggcggttc tcgtagattt cgccgacgcg
     4141 gaaggcagcg cgcgccttgt cgtacggctc ggccgcggcg gcgacctcgc cttcgagcaa
     4201 gcgcgccaga tcgtcgaagc ggccgcgttc gccgagcttg cgctcgagtg cgcggatcga
     4261 cgggcggtgg cgaggatcgg cagccagggc gcgccgatac gctgcgagcg cctcgtcttc
     4321 gcgtccaatg cgctgctcgt agagctcacc gactttgtaa tggagggcgg cgctgccggg
     4381 gccagtcgcc gtgtactcga gctcggcgcg atacgtctcg agcagcgcgt cccaccggcc
     4441 cgctttgtag tgcaaccggc cgagtcccgc gagagccggt gagtagccgc gatcgatttc
     4501 gaacgccttg cgataaaacg cgagcgcctg agcttcgtcg gcgagctcga gctcggcgac
     4561 ttcaccggcg cggtgcaaga gctcgagccg gcggcgtttg tcgctcacgc gcgcgacctc
     4621 gagctcgagc gcggcaatga gctctttgaa gcgtccagcg cgctcggcag cgcgctggag
     4681 cgcatggatt gcgcccaggt gctggccgtc gacgtcgagg atgcgccgga aagccgtcat
     4741 ggcgcgcgcg ggctcgccga gcgcgtcctc ctgtaaccga ccgatcttga agagccacgt
     4801 gattttgctc tccgcgtccg gcgccaggtc gaccgcgcgc tcgtagagct cgacgagcgc
     4861 ctcgtgcttg tgcgcctgca ccagcagacg ctcgagcgcc ttgaacgagg gcgcgtagcc
     4921 cggcacgaga c
//
LOCUS       DATIML010000696         1728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1878650, whole genome shotgun sequence.
ACCESSION   DATIML010000696 DATIML010000000
VERSION     DATIML010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1878650"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VLJ38_11930"
     CDS             <1..272
                     /locus_tag="VLJ38_11930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40275.1"
                     /translation="LGFHPLAPLLVPLLAFVFGQALLDYIRGTPPASPARAWWAKRTA
                     SWLAGALLVLLITVWLARFAGYFGGPVAVESFRDRVTRGAPMRAP"
     gene            complement(300..1400)
                     /gene="ychF"
                     /locus_tag="VLJ38_11935"
     CDS             complement(300..1400)
                     /gene="ychF"
                     /locus_tag="VLJ38_11935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HSU40276.1"
                     /translation="MGFSCGIVGLPNVGKSTLFNSLSTAKAEAANFPFCTIEPNVGVV
                     AVPDERVEALARVCDPDRKVYTSIRFVDIAGLVRGASKGEGLGNQFLSHIREVDAVAH
                     VVRCFTDENVTHVEGRVDPVADIATIDTELCLKDLDTVNKRLDRARKQSKGGDPLERL
                     AAAVCERLSAHLDQGKPARSFVLDEKETDIVRELSLLTQKPVFYVANVDETSLGKLGD
                     NKYYQALLAHAQSEGARVVAICAQLEAQIAELEPADRPDFLASAGLSEPGLNAVIRTG
                     YELLGLITFLTAGKQEVRAWTVRKGSTAPQAAGVIHTDFERGFIKAEVIWWEDFVALG
                     SEAKCREAGKLAIEGRDYVVRDGDVMHFRFNV"
     gene            complement(1481..>1728)
                     /locus_tag="VLJ38_11940"
     CDS             complement(1481..>1728)
                     /locus_tag="VLJ38_11940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="GMP synthase"
                     /protein_id="HSU40277.1"
                     /translation="PGALVLGKSRLEPNAVVRFAPRAWGVQFHPEFDGDVMRGYIAAR
                     RPALAAEGIDPEALPAEDAPEAAEVLRAFARLVERGA"
BASE COUNT          253 a          602 c          588 g          285 t
ORIGIN      
        1 ccctgggctt ccacccgctt gcgccgctgc tcgtcccctt gcttgcgttc gtgttcggcc
       61 aagcgctcct cgactacata cgcggcacgc cgcccgcgtc gcccgcgcgc gcgtggtggg
      121 cgaaacgcac ggcgagctgg ctcgcgggcg cgctgctcgt gctcttgatc acggtgtggc
      181 tcgcgcgctt cgcgggctac ttcggcggcc ctgtcgccgt ggagagcttt cgcgaccgag
      241 tgacacgcgg cgcgccgatg cgcgcaccgt gagccacagg gcaggccgtg aggccccgct
      301 cagacgttga agcggaagtg catcacgtcg ccgtcacgca ccacgtagtc gcgcccttcg
      361 atcgcaagct tgcccgcttc acggcacttc gcctcgctgc cgagcgcgac gaagtcctcc
      421 caccaaatca cctcggcctt gatgaagccg cgctcgaaat cggtgtgaat gacgcccgcc
      481 gcttgcggcg ccgtagaacc cttgcgcacg gtccaagcgc gcacttcctg cttgccggcc
      541 gtgaggaacg tgatgaggcc caagagctcg taccccgtgc gaatcacggc attgagcccc
      601 ggctcgctca ggccggcgct cgcgaggaaa tcgggccgat cggcgggctc gagctcggcg
      661 atttgagctt cgagctgcgc gcaaatcgcg accacgcgcg cgccttcact ctgggcgtgg
      721 gcgaggagcg cttggtaata tttgttgtcg ccgagcttgc cgagcgacgt ctcgtcgacg
      781 ttggcgacgt agaagacggg cttctgcgtg agcagcgaaa gctcgcgcac gatgtccgtc
      841 tccttctcgt cgagcacgaa cgagcgggcc ggcttgccct gatcgaggtg cgccgacagt
      901 cgctcgcaga cggcggcagc gagccgctcc agcggatcgc cgcccttcga ctgcttgcgc
      961 gcgcggtcga ggcgcttgtt cacggtgtcg agatctttga ggcagagctc ggtgtcgatc
     1021 gtcgcgatgt cggcgacggg atcgacgcga ccctcgacgt gcgtgacgtt ctcgtccgtg
     1081 aagcagcgca cgacgtgcgc caccgcgtcg acctcgcgaa tgtgcgaaag gaattggtta
     1141 ccgagcccct cgcccttcga cgcgccgcgc acgaggcccg cgatgtcgac gaagcggatg
     1201 ctcgtgtaga ccttgcgatc gggatcgcac acgcgcgcga gtgcttcgac gcgttcgtcg
     1261 ggcacggcga cgacgccgac gttcggctcg atcgtgcaga acgggaaatt cgcggcctcc
     1321 gccttcgcgg tcgagagcga gttgaacagc gtgctcttgc cgacgttcgg caggccgacg
     1381 atgccgcacg agaagcccat ggcggcggct catagcgtcg agcgtgcggt ttggcaacgt
     1441 cgggccactc gcgggcccgt tacgcccggc gcccggcccg ttacgccccg cgttcgacca
     1501 agcgcgcgaa cgcccgcagc acctcggccg cttcgggagc gtcctcggcc gggagcgcct
     1561 ccggatcgat gccctcggcc gcgagcgccg ggcggcgagc ggcgatgtag ccgcgcatga
     1621 cgtcgccgtc gaattccgga tgaaactgca cgccccaagc gcgcggcgcg aagcggacga
     1681 ccgcgttcgg ttcgagccgg ctcttgccga gcacgagcgc tcctggcg
//
LOCUS       DATIML010000697         3305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_722658, whole genome shotgun sequence.
ACCESSION   DATIML010000697 DATIML010000000
VERSION     DATIML010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3305
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722658"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VLJ38_11945"
     CDS             complement(<1..851)
                     /locus_tag="VLJ38_11945"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40278.1"
                     /translation="MRPSAGALLFLIGCAARPGAQLAAPAPVRTVEVPRIVVTPNDTA
                     TLAELFAQARAAAERGDFSRAAAEFDRIVALEPHGQLAGEALFLAGEARGLLGDRAGA
                     LTRYETVADRYPEHARARDAATRAVRLLAYDEQWDWAGRYADRALEHRAELAPLQLVV
                     VYAGKALQSVSAGDDTRASVYVERGRDIVERDGLDLAGRVPTELAPLYFALGEVSRLR
                     SERVPLEPTARFSGLLERRCQFILDAQRAYSDTWRAYDSFWSTLAGFRLAEMYEKLHK
                     DVMAMSPP"
     gene            1185..1385
                     /locus_tag="VLJ38_11950"
     CDS             1185..1385
                     /locus_tag="VLJ38_11950"
                     /inference="COORDINATES: protein motif:HMM:NF016231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HSU40279.1"
                     /translation="MKLGIDSPITDLEARHRDLDLAVSRLDKRAYLTPHEQRTVADLK
                     KEKLWTKDRIAHLRRSEPPSSR"
     gene            complement(1419..1913)
                     /locus_tag="VLJ38_11955"
     CDS             complement(1419..1913)
                     /locus_tag="VLJ38_11955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40280.1"
                     /translation="MRSAPDYAACHRAMRMYVLFALAALGCTTYREDLNRGQRLYEEN
                     QYEHALAIWRMLETDTDSLTENDQARYAYLRGMTDYRLGYRPYARHWLGVAKALEKEH
                     PGGLSQEWRDRLDKSLADLNTDVYGGAERSDKTSSTSVDHPADAPAPAPSDAPSTASP
                     TPAL"
     gene            complement(1927..2583)
                     /locus_tag="VLJ38_11960"
     CDS             complement(1927..2583)
                     /locus_tag="VLJ38_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanine-N7)-methyltransferase"
                     /protein_id="HSU40281.1"
                     /translation="MSSSPLQNPTPLAPNERVRPYADAPRIPEGEVIDPRELVGAKLA
                     PVELEIGPGRGGFVFERLAAEPKLFFLGLEIRRKWATIVDRRLAASEHAGRGRVFAED
                     ARSVLPRFVAGSIARAFVHFPDPWWKKRHHKRMVIGAPLLDELVRVLAPGGELFIQTD
                     VEERAASYEALCNACSGLMPAPGGPRIAENPFGARSPREKRAQADGLPIYRLLYRREA
                     "
     gene            2607..>3305
                     /locus_tag="VLJ38_11965"
     CDS             2607..>3305
                     /locus_tag="VLJ38_11965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40282.1"
                     /translation="MKAFARRHALRLGLLLALALLTLRSVLRATGGVPAVPLDDAFIH
                     FEYARSFWEGRGFAYTQGAPPVPGATSLLWPALFSLPYGLGLRGERVIWAAWLFGWAA
                     LGMLGYETRRASERLVSDDGALAAELMVLSFGGYVWFASSGMEVVPLAWILMRTARRA
                     AEWLERPSLERAQPWELVAYAALAPLIRPEGVLATFAVAATLAYGLRGRQRVFGAAVL
                     AFARVPALLNWLFTG"
BASE COUNT          525 a         1112 c         1151 g          517 t
ORIGIN      
        1 ggaggcgaca tcgccatcac gtccttatga agcttctcgt acatctccgc gagccgaaaa
       61 ccggcgagcg tcgaccagaa cgaatcgtaa gcgcgccagg tgtcggagta cgcgcgctgc
      121 gcgtcgagaa tgaattgaca gcgtcgttcg agtagccccg aaaaacgcgc tgtcggctcg
      181 agcgggacgc gctcggagcg caaccgcgac acttcaccga gcgcaaagta aagcggcgcg
      241 agctcggtcg gcacgcgacc ggcgagatcc aggccgtcgc gctccacgat gtcgcgacca
      301 cgctcgacgt aaacgctcgc gcgcgtgtcg tcacccgcgc tcacgctctg cagcgccttg
      361 cccgcgtaca cgacgacgag ctggagcggc gcgagctccg ccctatgttc gagcgcgcgg
      421 tccgcgtaac gtcccgccca atcccactgc tcgtcgtacg cgagcagccg cacggcgcgc
      481 gttgcagcgt cccgggcgcg agcgtgctcg gggtagcgat cggcaaccgt ctcgtaacgc
      541 gtgagcgctc ccgctcgatc gccgagcaaa ccgcgtgcct cgcccgccaa gaacaaagcc
      601 tcgcccgcga gctgcccgtg cggctcgagc gcgacgatgc ggtcgaactc cgcggcagcc
      661 ctcgaaaaat ccccacgttc ggcggcggcc cgcgcctgcg cgaagagctc ggcaagcgtc
      721 gcggtgtcgt tcggtgtcac cacgatccgc ggcacctcga cggtccgaac cggcgccggc
      781 gccgcaagct gcgcgcccgg gcgagcggca caaccaatca aaaagaggag cgcgccagcg
      841 ctgggacgca tcgagtccca agcgtagcgc tcggtgcacg tccgagcagg gtcgcgacaa
      901 agtccacggt ttctgctgct ttgctgcgga ccgacctagc gtgtttcagt cgcacgccgc
      961 gagacggcga cggcccgacg tgcgtccgga tgaaacccac gcgtgcttca aaaagcgcgg
     1021 ctcgcttcaa tgggccttca ggcgcgccga aaacgttgac gccaatcgtg agaggcatac
     1081 cctaatcgag tgagtcctcg ctgccgcagg ggaatcaaag cgacccgtcg cgggtcaaac
     1141 agcaacgagc agcgtgtgag ctcacgagaa ggaggtccat ttcgatgaag ctgggaatcg
     1201 actcgcccat caccgatcta gaggcacggc accgcgatct cgatcttgcc gtctcccgtc
     1261 tggacaagcg ggcgtacctg acgccgcacg aacagcgaac ggtcgcggac ctcaaaaaag
     1321 aaaagctttg gacgaaggat cgcatcgcgc accttcgtcg ttccgaacca ccgagtagtc
     1381 gttagcaatc gactccgccg gagacggccc cggcggtttc agagagcggg cgtgggcgaa
     1441 gcggtacttg gcgcgtcgct cggggcgggc gccggcgcat cggcgggatg gtcgacggac
     1501 gtcgagctgg tcttgtcgga gcgttcggcg cccccgtaca cgtccgtatt cagatcggcg
     1561 agcgatttgt cgagacggtc gcgccactct tggctcagcc cgcccgggtg ctctttttcg
     1621 agtgccttgg cgacgccgag ccagtggcga gcgtagggcc gatagccgag ccggtagtcg
     1681 gtcatgccgc gcaggtacgc gtagcgagcc tgatcgtttt cggtgagcga gtcggtgtcg
     1741 gtctcgagca tgcgccagat ggcgagcgcg tgctcgtact ggttctcttc gtacagccgt
     1801 tgtccgcggt tcaaatcctc gcgatacgtc gtgcagccga gcgcggcgag ggcaaaaagg
     1861 acgtacatgc gcatggcgcg gtggcaagca gcgtagtctg gcgccgaccg cacgcgcaag
     1921 cgcgcgtcag gcttcgcgcc ggtagagcaa gcggtagatg ggcaggccgt ccgcttgcgc
     1981 gcgcttttcg cgcgggctcc gcgcgccgaa cgggttttcg gcaatgcgcg ggccgcccgg
     2041 cgccggcatg agcccagagc acgcgttgca cagcgcctcg tagctcgccg cgcgttcctc
     2101 gacgtccgtc tgaatgaaga gctcgccgcc cggtgcgagc acgcgcacga gctcgtcgag
     2161 cagcggagcg ccgatcacca tgcgtttgtg atggcgcttc ttccaccacg ggtcgggaaa
     2221 atgcacgaac gcgcgcgcga tcgagcccgc cacgaagcgc ggcaacacgg agcgcgcgtc
     2281 ctcggcgaag acgcgtccgc gcccggcgtg ctcggacgcg gcgagccggc ggtcgacgat
     2341 cgtcgcccac ttgcggcgga tctcgaggcc caagaagaag agcttcggct cggccgcgag
     2401 ccgctcgaag acgaagcccc cacgccccgg gccgatctcg agctccacgg gcgcgagctt
     2461 ggcgccgacg agctcgcgtg gatcgatcac ttcaccctcc gggattcggg gcgcgtcggc
     2521 gtaagggcgc acgcgctcgt tcggggccaa gggggtgggg ttttgcaagg gcgacgacga
     2581 cacgagagtc aagtatacag gcccgcgtga aagcgttcgc gcggcggcat gcgctgcgac
     2641 tcgggttgct cctcgcgctc gcgcttttga cgctgcgttc ggtgttgcgg gcgacgggcg
     2701 gggtgccggc ggtgccgctc gacgacgcgt tcattcactt cgagtacgcg cgctcctttt
     2761 gggaagggcg cggctttgcc tacacccagg gcgcgccccc cgtcccgggc gccacgagcc
     2821 tgctctggcc ggcgctcttc agcctgcctt acgggctcgg cctgcgcggc gaacgcgtca
     2881 tctgggcggc gtggctcttc ggctgggcgg cgctcggcat gctcgggtac gagacgcgcc
     2941 gcgcgagcga gcggctcgtg agcgacgacg gcgcgctcgc ggccgagctc atggtgctct
     3001 cgttcggcgg gtacgtctgg ttcgcctcga gcggcatgga ggtcgtgccg ctcgcttgga
     3061 ttttgatgcg cacggcgcga cgcgcggccg aatggctcga gcggccgagc ttggagcgcg
     3121 cgcagccctg ggagctcgtg gcgtatgccg cgctcgcgcc gctcattcga cccgaaggcg
     3181 tgctcgcgac cttcgcggtc gcggcgacgc tcgcctacgg cctgcgcggg cggcagcgcg
     3241 tgttcggcgc cgcggtgctc gccttcgcgc gcgtgccggc gttgctcaat tggctcttca
     3301 cgggc
//
LOCUS       DATIML010000698         3920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5344377, whole genome shotgun sequence.
ACCESSION   DATIML010000698 DATIML010000000
VERSION     DATIML010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3920
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5344377"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..1097
                     /locus_tag="VLJ38_11970"
     CDS             84..1097
                     /locus_tag="VLJ38_11970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40283.1"
                     /translation="MLSGRDWVSLFPFGRSVQYLYRPAPGGNPDAWDVLGANLSPFVQ
                     NLISPERAYLMYYAFRVARESFDPRRVPPFRGVDIDWVHEDRSGKPDLNASRGAAEQM
                     VQGFGLLRRPDPPSAGPAAPATAAPAAPGARAPSPVPPPNETQGRPEAPGRLSGRDWT
                     STFRTPRTLDVLASPFRESVTRFVSALQAARVTVSIADTFRAPERAYLMHYAFRIARE
                     GLDPAKVPRMRGVDIEWVHPNASGAPDLAASRSAAEQMVQGYNIVYRPALQSRHTEGL
                     AIDMSLSWSGELAIADGQGRTVTISSEPRTGAKNTDLHQVGASYGVYKLVSDAPHWSS
                     DGR"
     gene            1142..1915
                     /locus_tag="VLJ38_11975"
     CDS             1142..1915
                     /locus_tag="VLJ38_11975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40284.1"
                     /translation="MTLDEFVGSLLSGITRGRAQSDNTSAQVAEQYAQHELLKGFPIP
                     RMTIGNMEIEATFAIAPKGGSAAPLADAEIQKAALYRLRELVAELPHEPELAPVFQAH
                     PSARSSWHAGLEGVVTRLGQVLSGPAPDLENVVNSLGVTLLNYVYECAPEEQRRLLFA
                     SRPNVTKDESSGKPAEPSSKLIERLLRTRVKALLGSTIPEQAGAATAQGLSVIVTSNE
                     LAQLNPASFQKVKFTLTSSDRRWVSLEKDGTKVNVLDRA"
     gene            complement(2022..2094)
                     /locus_tag="VLJ38_11980"
     tRNA            complement(2022..2094)
                     /locus_tag="VLJ38_11980"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2059..2061),aa:Ala,seq:ggc)
     gene            complement(2164..2607)
                     /locus_tag="VLJ38_11985"
     CDS             complement(2164..2607)
                     /locus_tag="VLJ38_11985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40285.1"
                     /translation="MSDHGHAGAADAHGDHHSVYDGAPANEPGPGEPTTPGWFTLLGI
                     TLVLALMLAWVATRPDGKTRAELTPSGSASAAPAASAPRPDRPLPTGARPGMPPGMPS
                     AFLPRPAPSGVRPVRPGGEFAIRPGDSANPAGGIQRRPRPTAAPQ"
     gene            2730..>3920
                     /locus_tag="VLJ38_11990"
     CDS             2730..>3920
                     /locus_tag="VLJ38_11990"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40286.1"
                     /translation="MPQPAQRYKVLERIAAGGMAEVFRAESAGLEGFKKLVAIKRVLP
                     HLAEKKQFIGMFLDEARVGAHLSHSNCVQVFDIGVGDNTYFIVMEFVDGSDLKGVIEH
                     RKTLGQPIPVEEACLITVRICEGLAYAHELVDGRGQSLHIVHRDMSPPNVLLTRFGEV
                     KIVDFGLAKANSQLEKSEPGIIKGKFSYLSPEAAQGLPVDARTDVFAVGIILWEMLAG
                     RRLFLGESDLETVRLVQRAEIPPLREFNPKIPAELERVLQKGLAGDPGKRYQTAREFG
                     RDLNQILFHIGRAVSSFDVSQLVLPIWRERQRKKKDKVDKGAIIGSLIDEALFEFSSL
                     ERDSQGNKSTVGAVPVSLGSFEDVHNWGDEMSNEPPAVRETGPMSYEAGNLAALEDET
                     PPPRM"
BASE COUNT          661 a         1278 c         1376 g          605 t
ORIGIN      
        1 agtgaaggac tacgggggcg gcgaggcccg gaacaacgcc gcctgagcgg atgaaacgcg
       61 cggcgcggtc cggggatgat tcgatgttga gcgggcgcga ctgggtttcg ctatttccat
      121 tcggtcgcag cgttcagtac ctgtacaggc cggcgcccgg cgggaatccc gacgcgtggg
      181 acgtgctcgg cgcgaatctg tcgccgttcg tgcagaacct gatctcgccc gagcgcgcct
      241 atctcatgta ctacgcgttt cgggtcgcgc gcgagagctt cgatccccgg cgagtgccgc
      301 cgtttcgggg cgtcgatatc gattgggtac acgaggatcg cagcggcaaa cccgatctga
      361 acgcgtcgcg tggcgccgcc gaacaaatgg ttcaggggtt cggccttttg aggcgtccgg
      421 atccaccgag cgccgggccc gccgcacccg ccacggccgc gcccgccgcc ccgggggcgc
      481 gtgccccgag cccggtgccg ccccccaatg aaacccaggg ccggccggaa gcgcccggac
      541 ggctcagcgg ccgtgactgg acatcgacgt tccgcacacc gcgcaccctc gacgtgctcg
      601 cctcgccatt tcgcgaaagc gtaacgcgct tcgtgagcgc gctccaagcg gcgcgcgtca
      661 ccgtgtcgat cgcggacacg ttccgagcgc ccgagcgcgc gtacctcatg cactacgcgt
      721 tccgtatcgc gcgcgagggg ctcgatccgg ccaaggtgcc gcgcatgcgc ggggtcgata
      781 tcgaatgggt ccatccgaac gcgagtggcg cccccgatct cgcggcgtcg cgcagcgccg
      841 ccgaacagat ggtgcaaggc tacaacatcg tctatcgccc cgcgctccag tcgcggcaca
      901 ccgaggggct cgcgatcgac atgagcctca gctggagcgg cgagctggcg atcgcggacg
      961 gacagggccg cacggtcacc atctcgagcg agccgcgcac gggcgccaag aacaccgatt
     1021 tgcaccaagt cggcgcctcg tacggagtct acaagctcgt gagtgacgcc ccgcattggt
     1081 cgtccgacgg gcgttagagt aagagagcgc ggtggcggca tgcgcgtgct aggacaatgc
     1141 cgtgactctc gatgaattcg tcggttcgct cttgtcgggc atcacgcgcg gccgcgcgca
     1201 gagcgacaac acgagcgcgc aggtggccga gcaatacgcg cagcacgagc ttttgaaggg
     1261 ctttcccatc ccgcgcatga cgatcggcaa catggagatc gaagcgacgt tcgcgatcgc
     1321 gccgaaaggc ggctccgccg cgccgctcgc cgatgccgaa atccagaagg cggcgctcta
     1381 tcgcttgcgc gagctggtcg ccgagctgcc gcacgagccc gagcttgcgc ccgtcttcca
     1441 ggcgcatccc tccgcacgtt cgagttggca cgcgggactc gaaggcgtgg tgacgcggct
     1501 cggccaagtg ctgagcgggc ccgcgcccga cctcgagaac gtcgtgaatt cgctcggcgt
     1561 cacgctgctg aactacgtgt acgaatgtgc ccccgaggag cagcgccgcc tgctcttcgc
     1621 gagccgcccg aacgtcacga aagacgagtc gagcggcaag cctgccgaac cgagctcgaa
     1681 gctcatcgag cgcctgcttc gaacgcgcgt gaaagcgctg ctcggcagca cgattccgga
     1741 gcaggccggc gcggcgacgg cgcagggcct gagcgtcatc gtgacctcga acgagctcgc
     1801 gcagctgaac ccggcttcgt tccagaaggt caagttcacg ctcacgtcgt ccgatcggcg
     1861 ctgggtcagc ctcgaaaagg acggcacgaa ggtcaacgtt ctcgaccgtg cctgagagga
     1921 tcggggcgac ttcgacggag tgacgccgca agggcgcttg tactcgcgtg tgaagtgcgc
     1981 cgcagaactg agtgcggctc ggatcgaacg agcgaagcga gtggagccgt gggggatcga
     2041 accccagacc tcatgactgc cagtcatgcg ctctcccagc tgagctacgg ccccgggtgg
     2101 ggatgaaagg gagcgggagc ctggcacacg ccgcacggaa aggcgagtgg tgccggccgg
     2161 aatttattgc ggagccgcgg tcggacgcgg ccggcgttgg atgccccccg cggggttcgc
     2221 cgagtcgccg gggcggatgg cgaattcgcc tccggggcgc acgggacgca cgccgctcgg
     2281 ggccgggcgt ggaaggaatg cgctcggcat gcccgggggc ataccgggac gcgcaccggt
     2341 cggcagtggt cggtcgggac ggggagccga agccgctggt gccgcggatg ccgaccccga
     2401 aggcgtgagc tccgcgcgcg ttttgccgtc ggggcgcgtc gcgacccagg cgagcatgag
     2461 cgcgaggacg agggtaattc cgaggagtgt gaaccagccg ggcgtcgtgg gttcgccggg
     2521 gcccggttcg ttcgcgggcg cgccgtcgta gacggagtgg tggtcgccgt gggcgtcggc
     2581 agcgccggca tggccgtggt cgctcatcgg ccgagagtca tcctccgttc gttctcgtgg
     2641 gtcaagggcg ctcgcttgac cgtcacggac gcggggtcct aggctgcctt tgggcgcccc
     2701 ggtggtgcgc tcggaagcgt ccgaactcga tgcctcaacc cgcccagcgt tacaaggtcc
     2761 tcgaaaggat cgctgcgggc ggcatggccg aggtgttccg cgccgagagc gccggcctcg
     2821 aagggttcaa gaagctcgtc gccatcaagc gcgtgctccc gcacctcgcc gagaagaagc
     2881 agttcatcgg catgttcctg gacgaggcgc gcgtcggcgc gcacctctcg cactcgaact
     2941 gcgttcaggt gttcgacatc ggcgtcggcg ataacacgta cttcatcgtc atggagttcg
     3001 tggacggctc cgatctcaag ggcgtcatcg agcaccggaa gaccttgggc caaccgatcc
     3061 ccgtcgaaga ggcgtgcctc atcaccgtcc gcatctgcga gggcctcgcg tacgcgcacg
     3121 agctcgtcga cggcaggggt cagtcgctcc acatcgtgca ccgcgacatg tcgccgccga
     3181 acgtgctgct gacgcgcttc ggcgaagtga aaatcgtgga ctttggcttg gccaaggcga
     3241 acagccagct cgaaaagagc gagcccggca tcatcaaggg taagttcagt tatctctcgc
     3301 ccgaagcggc gcaggggctg ccggtcgacg ctcgcaccga cgtcttcgcc gtgggcatca
     3361 tcttgtggga gatgctcgcg gggcggcggt tgtttttggg cgagagcgat ctcgagacgg
     3421 tgcggctggt ccagcgcgcg gaaatcccgc cgctccgcga gttcaacccc aagatcccgg
     3481 ccgagctcga gcgcgtgctg cagaaggggc tcgcgggcga tcccggcaag cgttaccaaa
     3541 cggcgcgcga gttcgggcgc gatctcaacc agatcctctt ccacatcggg cgcgcggtct
     3601 cgtcgttcga cgtttcgcag ctcgtgctgc cgatttggcg cgagcgacag cgcaagaaga
     3661 aggacaaggt agacaagggc gcgatcatcg ggtccctgat cgacgaagcg ctgttcgagt
     3721 tctcgtcgct cgagcgcgac agccagggca acaagagcac ggtcggcgcc gtgcccgtga
     3781 gcctcggttc gttcgaggac gtgcacaact ggggcgacga gatgtcgaac gagccgcccg
     3841 ccgtgcgtga aacgggtccc atgagctacg aagccggcaa ccttgccgcg ctcgaggacg
     3901 agacgccgcc gccgcgcatg
//
LOCUS       DATIML010000699         7296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2163084, whole genome shotgun sequence.
ACCESSION   DATIML010000699 DATIML010000000
VERSION     DATIML010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7296
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2163084"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(209..718)
                     /locus_tag="VLJ38_11995"
     CDS             complement(209..718)
                     /locus_tag="VLJ38_11995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40287.1"
                     /translation="MGSYGVMWRGLAGAGRSNAKGGVAARWWVLVAPLALGCGHEPEV
                     ADGVGLLGDWWLDGGTKTRDCGSGPVTTNLDHPHTIRIARGTTSDLTLQFFQGSGTDG
                     PVTCEFPFRGLSPMAAALVAPHSCNDGAGGVVTWLESKAFIPNWGVEVDTHLIDAEGC
                     TSDVQAAYL"
     gene            1317..1922
                     /locus_tag="VLJ38_12000"
     CDS             1317..1922
                     /locus_tag="VLJ38_12000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40288.1"
                     /translation="MNKFLPLLVAGALLTLNPHRAEATDLYAWNNHASPLTFRFGNEI
                     DMHQQSRATAGGSIVGFLYVQFTGTVTSDGYRVATHGDCAAARCTVGWTFSGKTLDAK
                     LIAEPMDDHPLFFVGRSNIPEPGAFSHFHWLGDMPAVGSHASGYILQLVAVDRFCFLH
                     HDAAAAVADKSCRDNQGVKVELGFDVASHLNVVPTDLSEPM"
     gene            complement(1940..3142)
                     /locus_tag="VLJ38_12005"
     CDS             complement(1940..3142)
                     /locus_tag="VLJ38_12005"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HSU40289.1"
                     /translation="MTESAPRTPSRRSSVAWLALAATLAVTSVARAEAPVRLRVLTWN
                     VWGLPAVSTNLKARMAMVPDAVAKLDPDIVLLQELWAEGDGVGVRQGLERRGYPYACH
                     LAHTKYGMTGLFTASKLPFRNIGFMPFAAGRVGHSFWHLEWLASKGVGSFAVQTALGE
                     IEIQNTHLQAQYETDAYEAERLSQASEILLMPQDRALPLVLGGDFNSGAEELPRRALL
                     DLDALRDTTPSPRPDTIFVRSGATLQLRVVETREALTEPVTLENGVVTELSDHPAVVV
                     DLELSVCSTCAPVAIVDTTSTRKAAHAALVTAAAITPWRVTLALSVAASLGAVAVSFF
                     RRTAALLAPSWRFRLFRRATLALLATGFVWTAYLGVLYYPARAKALRLVAQELEGLPP
                     SKPPSSLR"
     gene            3502..4419
                     /locus_tag="VLJ38_12010"
     CDS             3502..4419
                     /locus_tag="VLJ38_12010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40290.1"
                     /translation="MKALGTLVGSMVCVVWLSSAPMAAAQEPAEPAGTTAGADATAAA
                     APSAPDAANPANAAPAAAAPNAADTAKPIDGAPGTRADEPRFNDANADRAILFSTAET
                     HPKGTFFFSDYELILLQFGYAFTDNLQLTLTGVPPIISQQPYFFDLALKWNFLRTDVV
                     RAAVIGSGMAAFTGQSEEPNSLFGVRLNGVSQFCFETSCKSSFSFNVGTFLNNQSNEV
                     IPITLAGGLIVHVSRVVKLLLEPAYALVVGSGVENQPEGFLLDYGLRLSGNHFGFDLA
                     FIRPFATDSPFILGVPYVAFTYRTSGDGS"
     gene            complement(4424..4774)
                     /locus_tag="VLJ38_12015"
     CDS             complement(4424..4774)
                     /locus_tag="VLJ38_12015"
                     /inference="COORDINATES: protein motif:HMM:TIGR01617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HSU40291.1"
                     /translation="MKIYQYAKCSTCRKALAFLARRAVPYDAIDIVTEPPSKSELKRA
                     LELTGLPVKKLFNTSGESYRKGGFGERLPAMRQTEALDELARDGKLVKRPLVLGDDFA
                     LVGFDEAAYRARFG"
     gene            4800..5786
                     /locus_tag="VLJ38_12020"
     CDS             4800..5786
                     /locus_tag="VLJ38_12020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40292.1"
                     /translation="MRERRAVSILLASSLVLVVLARLELGTDETPPPPRHALHAIASA
                     STQLAAPSSAPGVMTYVYNAPESPLDRRYDYHWEILRQALERTQPKWGPYALLPSVGM
                     SEKRQTSELSAATGRISVMYLGTTPALEHSLVAVRIPVDKSLGSYSVFLVRPGALSRF
                     AAVETLDELRHLTVGLGLGWLDVDILRANRFEVVTGSSYDGLFRMAANARFDGFLRAA
                     VEVLGELEARQSEALELVVEPTLLVYYPLPMYFWFSSTEGGNKLAARAREGMLAMLED
                     GSYDRVFAAYQGYKIERLGLKARRLFKLPNPYLVAETPFDDPRLWFDPMKAP"
     gene            5783..>7296
                     /locus_tag="VLJ38_12025"
     CDS             5783..>7296
                     /locus_tag="VLJ38_12025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU40293.1"
                     /translation="MSPLGRQRSIAVLVIAALVGVATLSLGALGFENHRALREHAQVN
                     LRSELERTSNVLALSLELPLWNFDRLGVNDLLDGVMDNRDVFAVVVRQPDVSSARGVA
                     VYARARDGAWAPVATTTDIAPGTDLATDAEPVEVRAIVRGDDRLGTLTLVGTTRFMQE
                     RLRKSLIRLLLEIAAVDLLLVLSLYLLLSRIVLTPLAEVEAFARDVSLGKPGGVPEHR
                     RAFHGELESLRASLERTFELLDTRYTRLRASEEMHRASEAKYRLLAEHIGDVIWVLGE
                     DEKLVYVSPSVEQLRGFRPEAALTQTLEEMLTPDSVARLRDYLAEPPRKAGDAPTLLE
                     LEQTRAAGDTVWVEVTLLPMFDANGERSGVLGCSRDISERRRAAKQREELEQQVRQAQ
                     KLEAIGTLAGGIAHDFNNILAAILSYSEMLLLDLDAESPLKKDVLGIQAAVQRASALV
                     RQILAFSRKTPHEVKEIELSAVVAEALDMLRATLPATTTLRVRVGNATPVLADPT"
BASE COUNT         1257 a         2451 c         2345 g         1243 t
ORIGIN      
        1 tgaccggctc gaggcgctgg aagacttcta cgaagccgca acccaacgcg tcgccgactt
       61 tcgctggtat ctggaaggtc gcaggctcga agtgaccatc atcctgatct tggttctcga
      121 gtgcctgctc atggccggcg acatctatct tcatttcgcc cgcggccgct gatcacgccg
      181 ctgagtgccg gctcgtgtgg cgttcggctt ataagtatgc ggcctgcacg tcggaagtgc
      241 agccttcggc gtcgatgagg tgggtgtcga cttcgacgcc ccaattgggg atgaatgcct
      301 tgctctctag ccaggtgacc acgccgcccg caccgtcgtt gcagctgtga ggtgcgacca
      361 gggctgccgc catgggagag agcccccgaa agggaaactc gcaggtgact gggccatcgg
      421 tgcccgaccc ctggaagaac tgcagcgtga ggtcgctcgt cgttccgcgg gcaatccgaa
      481 tggtgtgcgg atgatcgagg ttggtggtca ctggcccgga gccgcagtcc ctggtcttgg
      541 taccgccatc gagccaccaa tcccccagca gtccgacacc gtccgcaact tcgggctcgt
      601 ggccgcaccc cagcgcgagg ggcgcgacca gcacccacca gcgcgccgcc accccgccct
      661 tcgcgttgct acggcctgcg ccagcgagcc cacgccacat cactccatac gatcccacac
      721 tgctggcctc cgatgcaacc catacaatcg tgttgctcat gaagcgggta aacagggcga
      781 ggattgcccc gtgtgcatcc acgtcgcgcc cgacggcaat gacacgctgg ccggctcgaa
      841 cgatggcgca acgccgtttg catcctgcaa gccgccctcg acttcaccga cacacaccgc
      901 cagctcgccc accgcgtctg cgtcgcgtcc ggcgcggcgt gcggcgcctc ggcgatacag
      961 cggccccgcg ggagccaacc tcacgatgcg tgagggcatc agcttgctcg gcaactacga
     1021 atcgacgacg tggacgcgct gcaccaattc gatccgtgag ctgcattgac tagaggcgac
     1081 gacgaccgcg cccgccgtga tccgcgcccg cgcgcggaga tttcgaccgt ttcggcgtag
     1141 cctcccgcga aaaaatcgcg ccgccagcgt cgcgacgcgc aagttcatcg cgtgcgagca
     1201 cgttgcgcac cgagttcgcc cgtcgcgctc acgtgcgtgc cttgaaagcg ccgatgcgaa
     1261 ctcactgccg cgtctcctgg cacgcgccgt gcacggggcc gacggcagga gccgacatga
     1321 acaagttttt gcccttactc gtcgctggcg cactgctcac gctcaaccct catagggccg
     1381 aagcgaccga tctgtacgcc tggaacaacc acgcttcgcc cctgaccttt cgattcggaa
     1441 acgaaatcga catgcaccaa cagagccgtg ccaccgcggg cggcagtatc gtgggctttc
     1501 tgtacgtgca gttcacgggc acggtgacga gtgatggcta tcgcgtggca acccacggcg
     1561 attgcgcggc ggctcgctgc acggtgggtt ggacgttcag cggcaagacg ctcgatgcga
     1621 agctcatcgc cgagccgatg gacgatcatc cgctgttctt cgtcggccgt tcgaacatcc
     1681 ccgagcccgg cgcgttcagt cactttcact ggctaggcga catgccggcc gtgggctcgc
     1741 acgctagcgg gtacatcctt cagctcgttg ccgtggaccg cttctgcttt ctgcaccacg
     1801 acgctgctgc agccgtcgcc gacaagtcgt gtcgcgacaa tcagggcgtg aaggtcgagc
     1861 tcgggttcga cgtggcctcc cacttgaacg tcgtcccgac ggatctgagt gagccaatgt
     1921 agcgctgacg cgctcggact caccgcaagc tcgacggagg cttcgacggc ggcaagccct
     1981 cgagctcttg cgccacgagg cgcagcgcct tggcgcgcgc gggataatag aggacgccga
     2041 ggtaagcggt ccaaacgaag ccggtcgcga gcagcgcgag cgtggctcgg cggaacagcc
     2101 tgaagcgcca agacggggcg agcagcgcgg ccgtgcgccg aaaaaacgaa accgccacgg
     2161 cgccgaggct cgccgcgact gatagcgcga gcgtgacgcg ccagggcgtg atggcagctg
     2221 cggtgacgag cgctgcatga gccgccttgc gcgtgctcgt cgtgtcgacg atcgcgacgg
     2281 gcgcgcacgt gctgcacacg gatagctcga ggtcgacgac gacggccgga tggtcggaga
     2341 gctcggtgac gacgccattt tcgagcgtca ccggctccgt gagtgcctcg cgcgtctcga
     2401 cgacgcggag ctgaagcgtc gccccgctgc gcacgaagat cgtgtccggg cgcggcgacg
     2461 gggtcgtgtc acggagtgcg tccagatcga gcagagctcg tcgcggcagc tcctccgccc
     2521 cggagttgaa atcaccgccg agcaccaatg gcagggcgcg gtcctgcggc atgagcagga
     2581 tttcactcgc ttgggagagg cgctcggcct cgtaggcgtc ggtctcgtat tgcgcctgaa
     2641 gatgggtatt ttggatctcg atttcaccga gcgccgtttg caccgcaaag ctgcccacgc
     2701 ccttcgaggc aagccactcg aggtgccaaa agctgtggcc gacgcgtccc gccgcaaagg
     2761 gcatgaaacc aatgtttctg aatgggagtt tcgacgccgt gaacagcccc gtcatcccgt
     2821 atttcgtgtg cgcgaggtgg cacgcgtacg gatagccacg acgttcgagt ccttgcctga
     2881 cgccgacgcc gtcaccttcg gcccaaagct cctgcaagag gacgatatcg ggatctagct
     2941 tggcgaccgc gtcgggcacc atggccatgc gcgctttcaa attggtcgag accgccggca
     3001 ggccccacac gttccaggta agcacacgca gtcggaccgg cgcctcggca cgcgctacgg
     3061 acgtgaccgc gagcgtggcc gccaacgcaa gccatgcgac ggagctcctc cggctcgggg
     3121 ttcgcggggc cgactcggtc atgtcgatct ctagcacgtt gaccggcagt tcgagaacgg
     3181 agccgtcttt cgcagcgaga gccgtgcact ttcgggcagt cgggctttcg gaagccgcac
     3241 ccgaggacct cgcagcacgc agaaggtggc cgattttttt cgcaactcga acctcggtcg
     3301 gccgacccag gtgcggcgcg cgctgtcgcg cgaccaagac acgcgtaagt gagacgctgt
     3361 tcggaaaggc acggtgtcgg gtgatggctt acatgcctaa aagcccggac aatgagccgc
     3421 aaaccacgcg cgcagtcgga aactttgaca ttcacgaaga gctttgaaag tctcaaggct
     3481 catcacttgg ggtcaaatca catgaaggca cttggaacat tggtgggttc gatggtgtgt
     3541 gttgtatggc tctcgagcgc gcccatggcg gccgctcagg agccggcgga gccggccggc
     3601 acgacggcag gcgccgacgc gacggccgcg gcggcaccga gcgcgccgga cgccgcaaac
     3661 ccggcgaatg ccgcgccagc cgccgcggcg ccgaacgccg cggatacggc gaagccgatc
     3721 gacggcgcgc ccggtacgcg cgccgacgag ccgcgcttca acgacgcgaa cgccgatcgc
     3781 gccatcttgt tctcgaccgc ggagacgcac ccgaagggga cgttcttctt ctcggattac
     3841 gagctcatcc tgcttcagtt cggctacgcg ttcacggaca accttcagct cacgctgacc
     3901 ggcgtgccgc cgatcatctc ccagcaaccg tacttcttcg acctggcgct caagtggaac
     3961 ttcttgcgca ccgatgtcgt gcgcgccgcc gtgatcggct cgggcatggc ggccttcacc
     4021 gggcaaagcg aggaaccgaa cagtctattc ggcgtcaggc tgaacggcgt gtcgcagttt
     4081 tgcttcgaaa cgtcctgcaa gagcagcttc tcgttcaacg tcggaacgtt cctcaacaat
     4141 cagtcgaacg aggtgattcc gatcacgctg gcgggcggcc tcatcgtcca cgtgtcgagg
     4201 gtcgtgaagc tcttgctcga acccgcttac gcgctcgtgg tcggctcggg cgtcgaaaat
     4261 cagcccgaag gctttctgct cgattacggc ctacgccttt ccggcaatca cttcggcttc
     4321 gacctcgcat tcattcgccc gttcgcgacc gacagcccgt tcatcctggg cgtgccgtat
     4381 gttgcgttca cctaccgcac ctccggcgac ggctcctgaa cgctcagccg aagcgcgccc
     4441 gatacgcggc ttcgtcgaag ccgacgagcg caaaatcgtc gccgagcacg agcggtcgtt
     4501 tgacgagctt gccgtcgcgg gcgagctcgt cgagcgcttc cgtttggcgc atggcgggga
     4561 gccgttcgcc gaaaccgccc ttgcggtaac tctcaccgct cgtattgaat agctttttga
     4621 cggggagtcc cgtgagctcg agcgcacgtt tcagctcgga cttgctcggc ggctccgtga
     4681 cgatatcgat cgcgtcgtag ggcacggctc gtcgggcgag aaaggcgagt gccttacggc
     4741 aggtggagca tttggcgtac tggtaaatct tcacggccgt gtattaagct cgggggcgca
     4801 tgagggaaag gcgagcagtc tcgattttgc tcgcgagctc gctcgtgctc gtggtgctgg
     4861 cgcgcctcga gctcggaacc gacgagacgc cgccccctcc ccggcacgcg ctccatgcca
     4921 tcgcgagcgc ctcgacacag ctggcggctc cgtcgtcggc gcccggcgtg atgacgtacg
     4981 tctacaacgc gccggaatcg ccgctcgatc gacgttacga ctaccactgg gagatcctgc
     5041 gccaggcgct cgagcgcacg cagccgaagt gggggccgta cgcgctcctg ccgtccgtcg
     5101 gcatgagcga aaagcgccag acctccgagc tcagcgcggc gactggacgc atcagcgtga
     5161 tgtacctcgg gacgacgccg gcgctcgagc actcgctcgt cgccgtccga attccggtcg
     5221 acaagagtct cggcagctac tccgtgttcc tcgtgcgacc gggcgcgctg tcacgcttcg
     5281 ccgcggtgga gacgctcgac gagctcagac atctcaccgt cggcctcgga ctcggttggc
     5341 tcgacgtcga catcttgcgc gcgaaccgct tcgaggtggt gacgggctcg agctacgacg
     5401 gcttgttccg catggcagcg aacgcacgct tcgacggctt cttacgcgcc gcggtcgagg
     5461 tgctcggcga gctcgaggcc cgacagagcg aagcgctcga gctcgtcgtc gagccgacac
     5521 tcctcgtcta ctatccgctg ccgatgtact tctggttctc gagcacggag ggcgggaata
     5581 agctcgcggc acgagcccgc gagggcatgc tcgcgatgct cgaggacggc agttacgacc
     5641 gcgtcttcgc agcgtatcaa ggctacaaaa tcgaacgcct cggactcaag gcgcgccggc
     5701 tgttcaagct tccgaacccc tacctcgtcg cggagacgcc gttcgacgat ccgcggctct
     5761 ggttcgatcc gatgaaggcg ccatgagccc gctcggccgc cagcgttcga tcgccgtgct
     5821 cgtgatcgcg gcgctcgtgg gcgtggcgac gctctcgctc ggcgcgctcg gcttcgaaaa
     5881 ccatcgggcg ctccgcgaac atgcgcaggt gaacctgcgt tcggagctcg aacgcacgag
     5941 taacgtcctc gccctcagtc tcgagctgcc gctctggaac ttcgaccgcc tgggcgtgaa
     6001 cgacttgctc gacggcgtga tggacaaccg cgacgtgttc gccgtcgtcg tgcgccagcc
     6061 ggacgtctct tccgcgcgcg gcgtcgccgt ctacgcccgg gcgcgcgacg gcgcctgggc
     6121 gcccgtcgcg accacgacgg acatagcgcc cgggacggat ctcgcgaccg acgcggaacc
     6181 cgtggaagtg cgggccatcg tacggggcga cgatcggctc ggcacgctca cgctcgtcgg
     6241 cacgacgcgc ttcatgcagg agcgcctgcg aaagagcctg attcggctct tgctcgagat
     6301 cgcggccgtc gacttgttgc tggtcttgag cctgtatctt ttgctctcgc gcatcgtgct
     6361 cacgccgctc gcggaagtcg aagccttcgc acgcgacgtg agcctcggca agccgggcgg
     6421 cgtgcccgaa caccgccgcg cgttccacgg tgagctcgag agcctacgcg cctcgctcga
     6481 acgcaccttc gagctactcg acacgcgcta cacgcgcctg cgcgcgagcg aagagatgca
     6541 ccgcgcctcc gaagcgaagt accggctgct ggccgagcac atcggcgacg tgatctgggt
     6601 gctcggggag gacgaaaaac tcgtgtacgt gagcccctcg gtcgagcagc tgcgcggctt
     6661 ccgccccgaa gccgcgctca ctcagacgct cgaggagatg ctcactcccg actcggtcgc
     6721 gcggctgcgc gactatctgg ccgagccgcc gcgcaaggcc ggtgacgctc cgacgctgct
     6781 cgagctcgaa cagacgcgcg cggcagggga tacggtttgg gtcgaggtca ccctgctgcc
     6841 catgttcgat gcgaacggcg agcgctccgg cgtgctcggc tgctcgcgcg acatcagcga
     6901 gcgccggcgt gcggcaaagc agcgcgaaga gctcgagcaa caggtgcggc aagcccaaaa
     6961 actcgaggcc atcggcacgc tcgccggcgg catcgcgcac gatttcaaca acatactcgc
     7021 cgcaattttg agctattccg agatgctgct gctcgacctc gacgcggagt caccgctgaa
     7081 gaaggacgtg ctcgggatcc aagcggcggt tcaacgcgcg agcgcgctcg tgcggcagat
     7141 cctcgcgttt agccgcaaga caccacatga ggtgaaagag attgaacttt cggcagtcgt
     7201 cgccgaagcg ctcgacatgc tgcgcgcgac cctgccggcg accacgaccc tgcgcgtccg
     7261 cgtcggcaac gcgacgcccg tcttggccga tccgac
//
LOCUS       DATIML010000700         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3318370, whole genome shotgun sequence.
ACCESSION   DATIML010000700 DATIML010000000
VERSION     DATIML010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3318370"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..722)
                     /locus_tag="VLJ38_12030"
     CDS             complement(96..722)
                     /locus_tag="VLJ38_12030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40294.1"
                     /translation="MHRLFNATSLLSVLATAAALLASAPAHAQSIIKQPGNHPNYGLE
                     LDPHLVAQYADLPYTSAGVGVGVRLSIPFVHNGPISSINNNIGITFGMDWAHFGDDGL
                     CHGNAPFYPDTCNANELWFPVAVQWNFFLTRIISVFGEFGLSPHYTSWGYDGPCEAGP
                     GTCSYRTHNLDLFEPVFWGGGRFLFSRTVGMTVRLGWPYISVGASILF"
     gene            complement(748..1392)
                     /locus_tag="VLJ38_12035"
     CDS             complement(748..1392)
                     /locus_tag="VLJ38_12035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40295.1"
                     /translation="MNFFGHAAIAGRFETDPVFALGAMLPDFYGMLGFRAPEPAPGPL
                     AAGVRFHHVTDLAFHELSAFRTLNHAACAELAERGVRRGTARAVAHVSVELLLDAELA
                     DNEAARTLYFAALRAGAAPECFATAEISSEQCVRLGRLLATLSERGVAKRPSSASISE
                     RLERALERRERLAILADDRPRVTEWVELFRARVVASAPMLLRELIADIERRLAP"
BASE COUNT          307 a          508 c          541 g          271 t
ORIGIN      
        1 ggcggggcgc tcttcggcca aagcgcccga tcttcgcaat tgtcccgcgc gccggcaaga
       61 actcctgtcg tccgttggaa cggaaacgtc gtctgtcaga ataaaatcga ggcgcccacg
      121 gaaatgtagg gccagccgag ccgtaccgtc atccccaccg tgcggctgaa gaggaaacgg
      181 ccaccgcccc aaaacaccgg ctcgaacaaa tcgagattgt gcgtgcggta cgagcaggtg
      241 cccggtcccg cttcacacgg cccgtcgtaa ccccagctcg tgtagtgggg ggacaagccg
      301 aactcgccga acacgctgat gatccgcgtg agaaagaagt tccactgcac cgcgacggga
      361 aaccagagct cgttggcgtt gcacgtatcc ggatagaagg gcgcgttgcc gtggcacaag
      421 ccgtcgtcgc cgaaatgcgc ccaatccatg ccgaacgtga tgccgatgtt gttgttgatg
      481 ctcgagatcg gcccgttgtg cacgaacggg atcgataagc gcacgccgac gccgacgccg
      541 gcgctcgtgt acggcagatc cgcgtactga gcgaccaggt ggggatcgag ctcgagcccg
      601 tagttcggat gattccccgg ctgcttgatg atcgattgcg catgggcggg cgcgctcgcg
      661 agcaacgcgg cggccgtcgc gagcacggag agcaagctcg tggcgttgaa aagacgatgc
      721 atgaggatgg tgcttggggg gttcggacta cggagcgagc cgtcgctcga tgtcggcgat
      781 gagctcgcgg agcagcattg gagcggatgc tacgacacgc gcgcggaaga gctcaaccca
      841 ttcggtcacg cgcggccgat cgtccgctag gatcgccagt cgttcacggc gctcgagcgc
      901 gcgctcgaga cgctcgctga tgctcgcgct cgagggtctt tttgccacgc cgcgttcgct
      961 caacgtggca agcaggcggc cgagccgcac gcactgttcg ctgctgattt cggctgtcgc
     1021 aaagcattca ggcgctgcgc cagccctgag cgcggcgaag tagagcgtgc gcgcggcttc
     1081 gttgtctgcg agctcggcgt cgagcaaaag ttctacgctc acgtgcgcca cggcacgtgc
     1141 cgtcccgcgc cgaacgcctc gctcggcgag ctcggcgcaa gcggcgtgat tcaaggttcg
     1201 aaaggccgaa agctcgtgaa acgcgagatc ggtgacgtga tgaaaacgta cgcccgcggc
     1261 gagcggcccc ggcgctggct cgggcgcgcg aaagccgagc atgccgtaaa aatcggggag
     1321 catggcgccg agggcgaaca ccgggtccgt ttcgaaacga ccggcaatcg ccgcatgccc
     1381 gaaaaagttc atgctcaaag gtaggctagc atgacagagt cgtagggttc ggtgtccagt
     1441 cgtcaacgtc ccgctcacgt catcgctcgg cgtgctctgt ctccacgcgt gagtgagctc
     1501 accctcgaaa tcgcaggccc gccggtcttt cgctggcgcg ccgggcaata tctcactctg
     1561 catcctgagg gcggcactgg tgcgcacgag ggaccgctcg cctactcgat cgcctccgcg
     1621 tgtgacg
//
LOCUS       DATIML010000701         7711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1879055, whole genome shotgun sequence.
ACCESSION   DATIML010000701 DATIML010000000
VERSION     DATIML010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7711
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1879055"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VLJ38_12040"
     CDS             <1..338
                     /locus_tag="VLJ38_12040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40296.1"
                     /translation="WSGIFSRISYVNGLAQKRVATNGAAAPRSRILALAAGGLHWGRE
                     RTSASAAEGELAELELLDARGALLDVLSVPFARFDHLPGGFLSVPSDVLARADVASVR
                     AGGVVLAVP"
     gene            complement(348..2111)
                     /locus_tag="VLJ38_12045"
     CDS             complement(348..2111)
                     /locus_tag="VLJ38_12045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HSU40297.1"
                     /translation="MPRSFSNLVELYQRACKDFGPQDVFGTKHGDHWHWITYAEFGER
                     VDDFRAGLATLGVGPGDRVAIVANNCIEWAVAAYATYGLRAAFVPMYEAQVPDEWLFI
                     LKDCAARVVIASRPDIFEKLVARKAEAPSLEHVIGIDLPETDTRAFAAVALRGRALPV
                     PVVEPAPGEIAGFIYTSGTTGLPKGVVLTHRNFCTNVNDAGVRFPIGPEDRCLAFLYW
                     AHAFGQTAELHQFIAFGLSLAINDDVANLVKNLADVRPTVLVAVPRIFNRIYDGITKQ
                     MAERPALIQKLFRAGIAAATRRSRGEKLGLGELVSLTLADALIFRKVRARLGGRLRFC
                     VSGSAALSKEVAEFVDALGIAVYEGYGLSEASPVVSSNYPGFQRIGSVGKPFPSVRVV
                     IDKDVTGDPVNGELVVYGDNVMQGYHNRPEENAQTFTADGGLRTGDMGHFDQDGFLFI
                     TGRIKEQYKLENGKYTVPSPLEEELKLSPYIANVMLYGENKPYNVAIVVPDTQSLERW
                     AKQEHHTLGDLRTDPRVRALLQAELDKHSTHFKGYERPKRLLVVLEDFTVENGILTPS
                     LKIKRREVVKRYDQQIEALYS"
     gene            2173..3645
                     /locus_tag="VLJ38_12050"
     CDS             2173..3645
                     /locus_tag="VLJ38_12050"
                     /EC_number="2.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035596 - methylthiotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MiaB/RimO family radical SAM
                     methylthiotransferase"
                     /protein_id="HSU40298.1"
                     /translation="MPGFAVVTFGCQMNQHDSDRISEVLARAGWTPEPDPELADLVLL
                     NTCSVREKAEHKLRSEVGRIALIKARRPSLVIGIAGCVAQQEGERLVARMPDVDLVIG
                     PDNIAELPDLLAQAELGAPAQVRTVFDSDAPRVLEARPAAGRAKTSEFVTVMKGCNER
                     CAFCIVPHTRGPERYRPAREIVAEVQRLVDAGAREVTLLGQTVNSYADPEQSLAPAPG
                     AGERPWTHTHPTTARQDESMFPSLLRAIVAGVPSLRRLRYTSPHPRHLTRSLILAHRD
                     LEPLARHVHLPVQSGSDRLLRRMIRRYSAAEYRERVAALRAEVPDVTLSTDVIVGFPG
                     ETREDFEATLELVRDVGFTGLFGFKYSPRPYTPALKLDGEPSEEEKSARLAELFAVSE
                     AQRQAHLVSCVGTTQRVLVEGRGKSSGYSGRSGQNEIVHFECPLDAIGEIVPVRITRA
                     FKNSLGGEPELGWVGSGAARGLSAEARAVQSERRTLPMAP"
     gene            3642..4163
                     /locus_tag="VLJ38_12055"
     CDS             3642..4163
                     /locus_tag="VLJ38_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HSU40299.1"
                     /translation="MSGIVRSFRGVSPRLGSGVYLAPTAAVVGDVELGEEVSVWYGAV
                     LRGDVGHIRIGRRTNVQDHACIHMSLGVSHAEIGEEVTIGHHATIHGARVEDGALIGI
                     GAILLDNAVIGHEACVGAGALVTAGMQVPPRVLVLGQPARVIRDLDEKDYLLGRKLAE
                     RYVGVAREHALAG"
     gene            complement(4195..4395)
                     /gene="thiS"
                     /locus_tag="VLJ38_12060"
     CDS             complement(4195..4395)
                     /gene="thiS"
                     /locus_tag="VLJ38_12060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HSU40300.1"
                     /translation="MHVTVNGEEKSVAAGLSVRGLIELLGLTDGPVAVERNREVVPRA
                     EHPTTVLVENDVLEIVHLVGGG"
     gene            4751..6247
                     /locus_tag="VLJ38_12065"
     CDS             4751..6247
                     /locus_tag="VLJ38_12065"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU40301.1"
                     /translation="MTGVVADYEALKGGSGRDIYFRPDRYQRSELGPIGLTVEITFAE
                     QREHCELVDVSQNGVAFVWPFGMAVEVGTILSEIVIKFDDHEAYRGEARVSSVRRDGG
                     RGIVGASLVDTLMNIEDVLHLRDVKAWAGGGEAKGLGLRDAAWRVPGQERFKALVGEL
                     RLLLEDGREKLGELEASLPWHVAHGEHDSPARDALIERVRSEFSAEVVQCSNEIDTAF
                     RLAGKSERDALREYSTRYLHDLFMQSPCMHRARHKPLGYPGDYEVMNSLYGDHFAGAT
                     LFAKGLNLAFVSTPAAVAVRTRKDQLKHEITNLLTNAKADRPVRILSIAAGPAQEIYE
                     LLQELHELPRPVEIVLFDQDKRALSFSYRRLQRVVNTKWKDRVSLLHLHDSIRHLLRG
                     AAVFAGHGAFDLVYSCGLFDYLQLPSGVSLCRSLFSLVAPGGRLYVGNMVPSCASRWV
                     MELHLDWFLVYRERSQMLEMARMAAPGFAAEMVEEPTRVNPFLLLRKD"
     gene            6294..>7711
                     /locus_tag="VLJ38_12070"
     CDS             6294..>7711
                     /locus_tag="VLJ38_12070"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU40302.1"
                     /translation="MLERNRRGLTSALWIALLLYPLFGVLDLLTAPPRWLWLLWGTRG
                     LVTLVTLLMFRVVRTSFFERYANALTASYMMLASACISLMTVFMGGLASPYYAGLTLT
                     IVATGLLYVWPLRVVAITHATIIASWVVPNLALGTHGHAVTALSNQFFLVSTAIIVGA
                     GQHLVYRAQREQIAGQLVIERTKKNLEHAHTQLQELDRVKSEFFANITHELKTPLTMM
                     LAPIELLIDGELGSISEPQRSTLASIERSGIKLRRLIGDLLDLSRLEESKLRLRVHRY
                     DLVEYLRGLVTQAEPLTQRKSLALEFSSNVESSGVYCDLERVERVMVNLLSNATKFTP
                     AQGKIAVRLHDDGEHARIEVEDTGIGFPPGMAERIFQRFFQVDSGSTRRYGGTGIGLA
                     LAKELVELHGGRIWAEGAVGQGAKLSVTLPKDREHFALDVLDRRGPRVDLLAGSRASD
                     HGLAEWHTDEHERFRLLEIDQAT"
BASE COUNT         1230 a         2496 c         2626 g         1359 t
ORIGIN      
        1 cttggtccgg catcttctcg cgcatcagct acgtgaacgg cctggcgcaa aaacgggtgg
       61 ccacgaacgg cgccgcggcg ccgcgctccc gcattctcgc gctcgcagcg ggcggtttgc
      121 attgggggcg ggagcgcacg agcgcgagcg cggcagaagg tgagctcgcc gagctcgagc
      181 tactcgacgc ccgtggcgcg ctgctcgacg tgctttcggt gccgttcgcg cgtttcgatc
      241 acttacccgg tggcttcctg agcgtgccgt ccgacgtgct cgcgcgcgcc gacgtggcga
      301 gcgtccgcgc gggcggtgtc gtgctagccg tgccgtgagc gtcgaagtta cgaatacaac
      361 gcttcgatct gctggtcgta gcgcttgacg acttcgcggc gcttgatctt gagcgagggc
      421 gtgaggatgc cgttttcgac agtaaagtcc tcgagcacga cgagcaggcg ctttggccgc
      481 tcgtagccct tgaagtgcgt cgagtgcttg tcgagctcgg cctggagcag agcgcgcacg
      541 cgcggatcgg tgcgcaggtc accgagcgta tgatgttcct gtttggccca gcgctcgagg
      601 ctctgcgtgt ccggaacgac gatcgccacg ttgtacggct tgttttcgcc gtaaagcatc
      661 acgttcgcga tgtacggcga aagcttgagc tcctcctcga gcggcgacgg caccgtgtac
      721 ttgccgtttt cgagcttgta ctgctctttg atgcgaccgg tgatgaacag gaagccgtcc
      781 tggtcgaagt gacccatgtc gcccgtgcgg aggccgccgt ccgcggtgaa cgtctgcgcg
      841 ttttcctccg ggcggttgtg atagccctgc atgacgttgt cgccgtagac gacgagctcg
      901 ccgttgaccg ggtcgcccgt tacgtccttg tcgatgacga cgcgaacact cgggaatggc
      961 ttgcccacgc tgccgatgcg ctggaaaccc gggtaattgc tcgagacgac ggggctcgct
     1021 tcgctcaagc cgtagccctc gtagacggcg atgccgagcg cgtccacgaa ttcggcgact
     1081 tccttgctga gcgccgcgct gccgctcacg cagaagcgca gccgcccacc gagccgcgca
     1141 cgtaccttgc gaaaaatcaa cgcgtcggca agcgtgagcg aaacgagctc gccgagtccg
     1201 agcttttcgc cgcgtgagcg gcgcgtcgct gcggcaatgc ccgcgcggaa gagcttttgg
     1261 atgagcgctg ggcgctccgc catctgcttg gtgatgccgt cgtagatgcg attgaaaatg
     1321 cgcggtacgg cgacgagcac cgtcgggcgc acgtcggcga ggtttttgac caggttcgcg
     1381 acgtcgtcgt tgatggcgag cgagaggccg aaggcgatga attggtggag ctccgccgtc
     1441 tgaccgaagg cgtgcgccca atacaaaaac gcaaggcacc gatcctcggg cccgatcggg
     1501 aaacggaccc ccgcgtcgtt cacgttcgtg cagaagttgc ggtgcgtgag cacgacgccc
     1561 ttcggcaatc cagtcgtgcc cgaggtgtag atgaagcctg cgatctcgcc aggcgccggt
     1621 tcgaccaccg gcacggggag cgctcggccg cgcagagcca cggccgcgaa cgctcgcgta
     1681 tccgtctcgg gcaaatcgat gccgatgacg tgctcgagtg aaggggcttc ggctttgcgg
     1741 gcgacgagct tctcgaagat gtccggtcgt gaggcgatga cgacgcgtgc ggcacagtcc
     1801 ttgaggatga agagccactc gtcggggact tgggcctcgt acatcgggac gaaggccgcc
     1861 cgcaggccgt acgtcgcgta ggcggcgacc gcccattcga tgcagttgtt cgccacgatg
     1921 gcgacgcggt cccccggacc cacgccgagc gtcgcgagtc ccgctcgaaa gtcgtccacg
     1981 cgctcgccga attccgcgta ggtgatccag tgccagtggt cgccgtgctt ggtgccgaag
     2041 acgtcctgag ggccgaaatc cttgcaggcg cgctggtaga gctcgacgag gttcgaaaaa
     2101 ctgcgaggca tggtgggaag gggcggcagc atagcctggc gattcgccga acgacgtggc
     2161 aaaaaccgcc ccatgcccgg ctttgcagtc gtgactttcg gctgccagat gaaccagcac
     2221 gattcggacc gcatttccga ggtgctcgcg cgcgcgggct ggaccccgga gccggatccc
     2281 gagctcgccg atctcgtctt gctcaatacc tgcagcgtgc gggaaaaagc cgagcacaag
     2341 ctgcggagtg aagtcgggcg catcgcgctc atcaaggcgc gccggccttc gctcgtgatc
     2401 ggcatcgccg gttgcgtcgc ccagcaagaa ggcgagcggc tggtcgcccg catgcccgac
     2461 gtcgatctcg tgatcggccc cgacaacatc gcggagctgc ccgacttgct cgcgcaggcc
     2521 gagctcggag cgcccgctca ggtgcgcacc gtattcgaca gcgacgcgcc gcgggtcctc
     2581 gaggcgcgtc ccgctgccgg gcgcgccaag acgagcgagt tcgtcacggt gatgaagggc
     2641 tgcaacgagc gctgcgcgtt ttgcatcgtg ccgcacacgc gcggtcccga gcgctatcga
     2701 ccggcgcgcg agatcgtggc ggaagtgcag cgcctggtcg acgccggcgc gcgcgaggtg
     2761 acgctgctcg ggcaaaccgt caacagctac gccgatcccg agcaatcgct cgcgcccgcg
     2821 ccgggggcag gcgaacggcc ctggacgcac acgcacccga ctacggcgcg ccaggacgag
     2881 agcatgtttc cctcgctcct gcgcgcgatc gtcgcgggcg tcccgagcct gcgacggctg
     2941 cgttacacga gcccgcaccc gcgccacctc acgcgctcgc tcatcctcgc gcatcgcgat
     3001 ctcgagccgc tcgcccggca cgtgcatctg cccgtgcagt cgggcagtga ccgcttgctg
     3061 cgccgcatga tccgccgata ctcggcggcc gagtatcgcg agcgtgtcgc ggcgctccgt
     3121 gccgaagtgc cggacgtgac gctctcgacc gacgtgatcg tgggttttcc gggcgaaacg
     3181 cgggaggact tcgaggcgac gctcgagctc gtgcgcgacg tgggcttcac gggtcttttc
     3241 ggcttcaagt attcgccgcg cccgtacacg cccgcgctca agctcgacgg cgagccgagc
     3301 gaagaggaaa agagcgcgcg tctcgcggag ctcttcgccg tctcggaagc gcagcggcag
     3361 gcgcacctcg tgtcgtgtgt cggcacgacc cagcgcgtgc tcgtcgaggg tcgcggcaag
     3421 agctcgggct acagcggccg gagcggccag aacgagatcg tgcacttcga gtgcccgctc
     3481 gacgccatcg gtgaaatcgt gcccgttcgc atcacccgtg ccttcaagaa ctcgctcggc
     3541 ggggagcctg agctcggctg ggtcggctcg ggcgcggcgc gcggcctgtc ggctgaggcg
     3601 cgcgccgttc agagcgagcg tcggacgctg ccgatggcgc catgagcggc atcgttcgat
     3661 cctttcgtgg cgtttcgcca cgcttaggca gcggcgtata cctcgccccg acggccgcgg
     3721 tggtcggcga cgtcgagctc ggggaagagg tgagcgtttg gtacggcgcc gtcctgcgcg
     3781 gcgacgtggg ccacatccgc atcggccgcc ggaccaacgt gcaggatcac gcctgcatcc
     3841 acatgtcgct cggtgtttcc catgccgaaa tcggcgagga agtgacgatc ggccatcacg
     3901 cgacgatcca tggcgcccgc gtcgaagacg gcgcgctcat cggcatcggc gcgatcctgc
     3961 tcgacaacgc cgtgattggc cacgaagcct gcgtgggcgc gggggcgctc gtgacggcgg
     4021 gcatgcaagt gccgccgcgc gtgctcgtcc tgggccagcc ggcgcgcgtc atccgcgatc
     4081 tcgacgagaa ggactactta cttggacgca agctcgccga gcgctacgtc ggcgtcgccc
     4141 gcgagcatgc gctcgccggg tagcggaccg ccgagacgca cgcggcgccc gcgttcaacc
     4201 gccgcccacg aggtgcacga tctcgagcac gtcgttttcg acgagaaccg tcgtcgggtg
     4261 ttcggcgcgc ggcacgacct cgcggttccg ctcgacggct acgggcccgt ccgtgaggcc
     4321 caatagctcg atcaggccgc ggacgctgag tccggcggcc acgctctttt cctcgccgtt
     4381 gacggtgacg tgcacgaacg gaggggtagc acgacccggc tagacgcgtt ttacgcgaga
     4441 caaacccgtc gactttgtca ttcggcaggg cttaagcgcg tagggggatg tgcgtagggg
     4501 gaggcagcgc gtgacgcgaa cgtgaaggac gcggcacatc gtcgcgtgac ccctgcgttg
     4561 acgttgcgat cgcaggcgaa gctttgtttg gattcgttcg gaaacataga ctccgctaac
     4621 agcctgagtg ttagcgcttc tttttttgac tggagaacaa cacgtgacgc aagagttcgc
     4681 atcggctgag gtccgcactc tcgagtccga gccacccgtc agcggcaggc gagaaattcg
     4741 gcccgctccc gtgacgggag tggtcgccga ctacgaagca ctcaaaggcg gcagcggccg
     4801 cgacatttac tttcgtccgg atcgctatca gcggtcggag ctcggcccca tcggtctcac
     4861 cgtcgagatc acgttcgccg agcagcgcga acactgcgag ctcgtcgacg tctcgcagaa
     4921 cggcgtcgcg ttcgtgtggc ccttcggcat ggccgtcgag gtcggcacta ttttgagcga
     4981 aatcgtgatc aagttcgacg atcatgaagc gtatcgcggc gaggcgcgcg tctcttccgt
     5041 acgccgcgac ggcgggcgcg gcatcgtggg cgcctccctc gtggatacgc tgatgaacat
     5101 cgaggacgtg ctgcacctgc gggacgtgaa ggcgtgggcg ggcggcggcg aggcgaaagg
     5161 cctcgggctg cgcgacgctg cctggcgcgt gcccgggcag gaacgcttca aagcgctcgt
     5221 cggagagctc cggctgctgc tcgaagacgg gcgcgagaag ctcggcgagc tcgaggcgtc
     5281 gctgccgtgg cacgtggcgc acggcgagca cgattcgccg gcgcgcgacg cgttgatcga
     5341 gcgggtgcgc agcgaatttt cggcggaagt cgtgcagtgc tcgaacgaaa tcgacacggc
     5401 ctttcgcctc gccggcaaga gcgagcgcga cgccttacgc gagtactcga cccgctatct
     5461 ccacgacttg ttcatgcagt cgccctgcat gcaccgcgct cggcacaagc cgctcggcta
     5521 tcccggcgac tacgaggtga tgaacagcct ttacggcgat cacttcgcgg gggcgacgct
     5581 cttcgcgaag gggttgaacc tcgcgttcgt ttcgactcca gctgcggtcg ccgtgcgcac
     5641 gcgcaaggat caactcaagc acgaaatcac gaatttactc acgaacgcga aagcggatcg
     5701 ccccgtgcgc atcctgtcga tcgcggcggg tccagcccag gaaatctacg agctcttaca
     5761 ggagctgcac gaactgccgc gtccggtcga gatcgtgctc ttcgatcagg acaagcgagc
     5821 gctctccttt tcgtatcggc ggttgcagcg ggtcgtcaac accaagtgga aggaccgcgt
     5881 gtcgctcttg cacctgcacg actcgattcg acacctgctg cgcggcgcgg cggtgttcgc
     5941 gggccacggc gcgttcgatc tcgtctactc gtgcgggctc ttcgactact tgcagctgcc
     6001 gagcggcgtg tccctctgcc ggagcttgtt ctcgctcgtg gcgcccggcg ggcggctgta
     6061 cgtgggcaac atggtgccga gctgcgcgag ccgctgggtg atggagctcc acctcgattg
     6121 gttcttggtc taccgcgagc gttcgcagat gctcgagatg gcgcgcatgg ccgcgccggg
     6181 cttcgccgcg gagatggtgg aggagccgac gcgcgtgaac ccgttcttgc tgttgcggaa
     6241 ggactgagcg cctggcggaa gattcggagc tcgagtcgcg ctggctcgct tggttgctcg
     6301 agcgcaaccg gcgcggactc acgagtgcgc tctggattgc gctcttgctc tatccgctgt
     6361 tcggcgtgct cgatctgctg acggcgccgc cgcgctggct ctggctgttg tggggcacgc
     6421 gcggcctggt cacgctggtg acgttgctca tgttccgcgt cgtccggacg tcgtttttcg
     6481 aacggtacgc caacgcgctc acggcgtcgt acatgatgct cgcgtcggcg tgcatcagct
     6541 tgatgaccgt attcatgggc ggcctcgcct cgccgtacta cgcggggctc acgctcacga
     6601 tcgtggcgac ggggctcctt tacgtctggc cgctccgcgt cgtcgcgatc acgcacgcga
     6661 cgatcatcgc gtcctgggtc gtgccgaacc tcgcgctcgg tacgcacggc cacgccgtca
     6721 cggcgctttc gaaccaattc ttcctggttt cgacggcgat catcgtgggt gcggggcaac
     6781 acctggtcta ccgtgcccag cgcgaacaga tcgccggaca gctcgtgatc gagcgcacga
     6841 agaagaacct cgagcacgcc cacacgcagc tgcaggagct cgatcgcgtc aaatccgaat
     6901 tcttcgccaa catcacgcac gagctgaaga cgccgctcac gatgatgctc gcgccgatcg
     6961 agctcttgat cgacggcgag ctcggctcga tctccgaacc gcagcgctcg acgctcgcgt
     7021 cgatcgagcg gagcggcatc aagcttcgcc gtctgatcgg cgatttgctc gatctgtccc
     7081 ggctcgagga gtcgaagctc cggctgcgcg tgcaccgcta cgatctggtc gagtatttgc
     7141 gcgggctcgt gacgcaagcg gagccgctca cgcagcgcaa atcgctcgcc ctcgagtttt
     7201 cttccaacgt ggagagctcg ggcgtctatt gcgacctcga gcgcgtcgag cgcgtgatgg
     7261 tgaacctcct ctcgaacgcg acgaagttca cgccggcgca gggtaagatc gcggtgcgcc
     7321 tgcacgatga cggcgagcac gcgcgcatcg aggtggaaga cacgggcatt ggctttccgc
     7381 caggcatggc cgagcggatt tttcagcgtt tctttcaggt cgattccggc agcacgcgcc
     7441 gctacggcgg gaccggcatt ggactcgcgc tcgccaagga gctcgtcgag ctccacggtg
     7501 ggcggatttg ggccgagggc gcggtggggc agggagcgaa gctcagcgtg acgctgccca
     7561 aggatcgcga gcacttcgcc ctcgacgtgc tcgaccggcg cggcccgcgc gtcgatctgt
     7621 tggcgggtag ccgcgcctcc gatcacggcc tcgccgagtg gcacaccgac gagcacgagc
     7681 gttttcggct gctcgagatc gatcaggcga c
//
LOCUS       DATIML010000702         2261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3318540, whole genome shotgun sequence.
ACCESSION   DATIML010000702 DATIML010000000
VERSION     DATIML010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3318540"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2261
                     /gene="treY"
                     /locus_tag="VLJ38_12075"
     CDS             <1..>2261
                     /gene="treY"
                     /locus_tag="VLJ38_12075"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HSU40303.1"
                     /translation="IRAEHPALRRSKFFTGADVFGTRVRDLLWFNPDGQPTTQESWAN
                     PEGRAVAMFLAGRGIDDIDETGRSLVDDNLLLLLNASEGSVDFVLPVEAVEEPWELLL
                     DTTDDHAEEHRRPGEKTTLIGHSLKLFRSSSRVLRAGGALHRLNATYRLQLHAGFRFA
                     DAQAITPYLQDLGITDVYTSPILRATPGSTHGYDVVDYGSLNPELGGEPAFSAWSDEL
                     KRRNMGLIIDFVPNHMGISGGQNSAWDDVLEHGPSSSCAEFFDIDWTPSRADLQNRVL
                     LPMLGGQYGDVLERGELSVVWENSTLKLRYYDRRLPIAVDTLGPLLCAAVAKSRLPEE
                     DLARRELESIVVALGHLPPRAPLSPELRRERHRETQVIRRRLSTLVSESAAVRSGLDE
                     ALVELNGVSGVSASFDALERLVSSQSYRLASWRVAVEEINYRRFFDVNDLAAVRMETE
                     AVFSRAHALVFRLIEEKRVNALRLDHTDGLYDPYAYFDAIQRRFVPNEPGTNVSPDDA
                     ARPLPLLVEKILGRDETLPSSWPVDGTTGYDFLALVEALWVDPEAERAMTSVYRAFTG
                     DQATFHEHVYAAKRHVLAHVLVSEINMLATRLQRIAMSHRSYRDFTLLSLTRAIEEVA
                     SAFPVYRTYLRDTAERQEQDERLIRAAVRLARRRRQALSPSIFEFVERQLLGQTTPTG
                     VEIDRRAFAMPFQQLTGPIMAKAVEDTAFYRYTRLICLNEVGGQPARFGLEPATFHAS
                     NEERARSWPFAMLA"
BASE COUNT          370 a          781 c          737 g          373 t
ORIGIN      
        1 atccgcgccg aacacccggc cctgcgccgc tcgaaattct tcacgggcgc cgacgtcttc
       61 ggcactcggg tgcgtgacct cttgtggttc aaccccgacg ggcagccgac gacccaggag
      121 agctgggcca accccgaggg ccgcgcggtc gcgatgtttc tcgctggccg cggcatcgac
      181 gacatcgacg agaccgggcg ctcgctcgtc gacgacaatc tgctcctgct cttgaacgcg
      241 agcgaggggt cggtggactt cgtgttgccc gtcgaagccg tcgaggagcc gtgggagctc
      301 ctgctcgata cgacggacga tcacgccgag gagcaccggc gacccggcga gaagaccacg
      361 ctcatcggtc actcgctgaa gctcttccgg tcgagctcgc gcgtcctgcg cgcggggggc
      421 gcgctgcatc gcctgaacgc gacgtatcga ctgcagctgc acgcgggctt tcgcttcgcc
      481 gacgcgcagg cgatcacccc ttacctgcaa gacctcggca tcacggacgt gtacacgtcg
      541 ccgatcctgc gggcgacgcc cggaagcacg cacggttacg acgtggtcga ctacggctcg
      601 ctcaaccccg agctcggcgg cgagccggcg ttctcggcct ggagcgacga gctcaaacgc
      661 cggaacatgg gcctcatcat cgacttcgtg ccgaaccaca tgggcatctc cggcggccag
      721 aacagcgcct gggacgacgt gctcgagcac ggcccgagct cgtcgtgcgc cgagttcttc
      781 gacatcgatt ggaccccctc gcgcgcggac ctacaaaacc gcgtgctttt gcccatgctc
      841 ggcgggcagt acggcgacgt gctcgagcgg ggggagctca gcgtcgtgtg ggagaactcg
      901 acgctcaagc tccgctacta cgaccggcgg ctgccgatcg ccgtggatac gctcgggccg
      961 ctcttgtgcg ccgccgtcgc gaaatcgcgc ttgcccgagg aggacctcgc gcggcgtgag
     1021 ctcgagagca tcgtcgtggc gctcggacat ttaccgccgc gcgcgccgct ttcgcccgag
     1081 ctccggcgcg agcgccaccg tgagacgcag gtgattcggc ggcgactttc gacgctcgtc
     1141 tccgaatccg cggccgtgcg tagcgggctc gacgaggccc tcgtcgagct caacggcgtg
     1201 agcggggtct cggcgagctt cgacgcgctc gagcggctcg tgtcgagcca gagttaccgg
     1261 ctcgcttcgt ggcgcgtggc cgtcgaggag atcaactacc ggcgcttctt cgacgtgaac
     1321 gacttggcgg ccgtgcgtat ggaaaccgag gcggtgttca gccgcgctca cgcgctcgtg
     1381 ttccgcctga tcgaggagaa gcgcgtcaat gcgctaaggc tcgatcacac cgacgggctc
     1441 tacgatccct acgcgtattt cgacgcaatc cagcggcgct tcgtgccgaa cgagcccgga
     1501 acgaacgtca gccccgacga cgcagcccgt ccgctgccgc tgctcgtcga aaagattctg
     1561 ggacgcgacg agaccctgcc gtcgagctgg cccgtcgacg ggaccacggg ctacgacttt
     1621 ctcgcgctcg tggaggcgct ctgggtcgat ccggaagccg agcgcgccat gacctccgtt
     1681 tatcgcgcct ttacgggcga tcaagcgacg tttcacgagc acgtgtacgc cgccaaacgt
     1741 cacgtgctgg cgcacgtgct cgtgagtgag atcaacatgc tggcgacgcg tctgcagcgc
     1801 atcgcgatgt cgcaccggag ctaccgtgac ttcaccctgc tcagtctcac gcgcgcgatc
     1861 gaagaggtag cgagcgcatt ccccgtgtac cgcacgtacc tgcgcgacac ggccgaacgg
     1921 caggagcaag acgagcgact gattcgcgcc gccgttcgcc tcgcgcgccg gcgccgtcaa
     1981 gcgctgagcc cgagcatctt cgaattcgtc gagcgccagc tgctcggtca gacgacgccg
     2041 accggcgtcg aaatcgaccg ccgcgccttc gccatgccct ttcagcagct cacggggccc
     2101 atcatggcca aggcggtcga agacaccgcg ttttatcgct acacgcgctt gatttgcttg
     2161 aatgaggtcg gcgggcaacc tgcacgcttc gggctcgaac cggcgacgtt tcacgcgagc
     2221 aacgaagagc gcgcgcgcag ctggccgttt gcgatgctcg c
//
LOCUS       DATIML010000703         3259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5055574, whole genome shotgun sequence.
ACCESSION   DATIML010000703 DATIML010000000
VERSION     DATIML010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3259
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5055574"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1909
                     /locus_tag="VLJ38_12080"
     CDS             <1..1909
                     /locus_tag="VLJ38_12080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU40304.1"
                     /translation="LAAPAPHPGLDVDRSEWLAGLLAYSPDVISILDLEGRLIYLSRT
                     GSEVDPRSLYGHAVADDIPVPYRERWLEALKRALTTKQAQQLELLSQMALWWETRIIP
                     IERDGAVTYLLSIGKDITAQKRAEAELAVRDAQLHLALEASGMGQWSWNVETDLVSLD
                     AAARRVFAWPEQSEDLKLESFLALVQSEDRERVKTALLRAVENCEYPDTTFRIALADG
                     AVRWILSKGQVLKNESGKGHELVGGMIDITDGKRTEAQLHRSQKLEAIGQLAGGVAHD
                     FNNLLVAILGNLSLARETPDDQERGTLLAEALAAGNRAAELTRQLLAFSTRQHVDQEM
                     IDVNIMLGDTLKLLRRLVPESVKMDFIGGHRLPRVLGDRGQLEQVIVNLCVNARDAMP
                     HGGKLAIETELVLVNGRFRETHPWVRPGRYVLVSVTDTGIGIPPDALEHVFEPFFTTK
                     AQGSGLGLATAYGVVRRHGGFMHVYSEVGKGTTFKVYLPMSARDAADVGTKVQGPVKG
                     GSETILVAEDEPRVRAVVVRILQRAGYRVITAEDGEEAVRKFDEQKPPFDLVLLDAVM
                     PNKGGTEALAEIRERAPHIAAILCSGYSDSLASVSTLGEGVTFLPKPYEPDELLRIVR
                     QRLDARQRPAP"
     gene            1956..2201
                     /locus_tag="VLJ38_12085"
     CDS             1956..2201
                     /locus_tag="VLJ38_12085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40305.1"
                     /translation="MANLTIVVDDEVLKRARMRALEQGTSVNAVLAARLQAYAGEAET
                     QTRTTQALIALARASRQPKAGKAREPRRFTRDELHER"
     gene            2191..2625
                     /locus_tag="VLJ38_12090"
     CDS             2191..2625
                     /locus_tag="VLJ38_12090"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HSU40306.1"
                     /translation="MNAERVFIDTNVLTYLFDFAEGDKQKRAERTLAEETREMFVSTQ
                     VLQELYVSLTKGKSPIATSEVAEQAVHEASKYSVVHIDPALVFSAIEIARKHKISFWD
                     ALIVGAAARADCGAVLSEDLNAGQIIEGVRIENPFAHGQRKR"
BASE COUNT          611 a         1079 c         1043 g          526 t
ORIGIN      
        1 gctcgcggcg cccgcgccgc acccgggact ggatgtcgat cgttcggaat ggctggcggg
       61 cctcctcgcg tactcgcccg acgtgatctc gatcctcgat ctcgagggac gtctcatcta
      121 cttgagccgc accgggagcg aggtggatcc gaggagcctg tacggtcatg ccgtcgcgga
      181 cgacatcccc gtgccgtacc gcgagcgctg gctcgaagcc ttgaagcgcg cgctcacgac
      241 caagcaagcg cagcagctcg agctcctgag ccagatggcg ctctggtggg agacgcgcat
      301 catcccgatc gaacgtgacg gcgccgtcac ttatctcttg tcgatcggca aggacatcac
      361 ggcccaaaag cgcgccgagg ccgagctcgc cgtgcgcgac gctcagctcc acctcgcgct
      421 cgaagcttcc gggatggggc agtggtcgtg gaacgtcgaa accgatttgg tcagcttgga
      481 cgcggccgcg cggcgcgtct ttgcgtggcc ggagcagagc gaggacctga agctcgagtc
      541 ctttctcgcg ctcgtgcaga gcgaggaccg cgagcgcgtg aagacggcgt tattgcgcgc
      601 cgtcgaaaac tgcgagtacc ccgatacgac gtttcgcatc gcactcgccg acggcgccgt
      661 gcgctggatt ttgtcgaaag gccaagtgct caagaacgag agcggcaaag gccacgagct
      721 cgtcggcggc atgatcgaca tcaccgacgg caagcgcacc gaagcgcagc tccaccgttc
      781 gcagaagctc gaggccatcg gtcagctcgc gggcggcgtg gctcacgact tcaacaacct
      841 gctcgtggcg attttgggca atttgagcct ggcccgtgaa acgcccgatg accaagagcg
      901 cgggacgctg ctcgccgagg cgctcgccgc gggcaatcgc gcggccgagc tcacgcgcca
      961 gctgctcgcc ttcagcacgc gccagcacgt cgatcaagaa atgatcgacg tgaacatcat
     1021 gctcggcgac acgttgaagc tactccgccg cctcgtgccc gagagcgtga aaatggactt
     1081 catcggcggg caccgcttgc cgcgcgtgct cggcgatcgc gggcagctcg agcaggtgat
     1141 cgtcaacctg tgcgtgaatg cgcgcgacgc gatgccgcac ggcggcaagc ttgccatcga
     1201 gaccgagctc gtcctcgtca acggacgctt tcgcgagacg cacccgtggg ttcggcccgg
     1261 tcgctacgtg ctcgtgagcg tgactgacac cggcatcggc attccgcccg acgcgctcga
     1321 gcacgtgttc gagccgttct tcacgaccaa agcgcagggg tcgggcctcg ggctcgcgac
     1381 ggcgtacggc gtcgtgcgcc ggcacggcgg cttcatgcac gtctacagcg aggtcggcaa
     1441 gggcacgacg ttcaaagtgt acttgccgat gtcggcgcgt gacgccgccg acgtcgggac
     1501 caaagtgcag gggccggtca agggcggttc ggaaaccatt ctcgttgccg aagacgaacc
     1561 gcgcgtgcgc gccgtcgtgg tgcgcatcct ccagcgcgcg ggttaccgcg tcatcacggc
     1621 cgaagacggc gaagaagccg tgcgcaaatt cgacgagcaa aagccgccgt tcgacctcgt
     1681 gctgctcgac gcggtcatgc ccaacaaggg cggcaccgaa gcgctcgcgg aaatccgcga
     1741 gcgcgcgccg cacatcgccg cgatcctctg cagcggctac tccgactcac tcgcgagcgt
     1801 ctcgaccctc ggcgaaggcg tcaccttcct cccgaagccc tacgaaccgg acgagctctt
     1861 gcgcatcgtg cggcaacgac tcgacgcgcg gcaacgtccg gccccctgac gctgcgcaca
     1921 ctgcgctgtc acgggatccg tgctacacgg aactcgtggc caatctcacc atcgtggtag
     1981 acgacgaagt cctcaaacga gcccgcatgc gcgctctgga gcaaggcacg agcgtcaacg
     2041 cagtcttggc agctcgcctg caagcttacg cgggtgaggc cgagacgcag acgcggacca
     2101 cgcaggcgct catcgccctc gctcgcgcgt cgcgccagcc gaaggcgggc aaggcacgcg
     2161 aaccacggcg cttcacgcgc gacgagctgc atgaacgctg aacgcgtctt catcgacacg
     2221 aacgtcctca cctatctttt cgacttcgcc gaaggcgaca agcaaaagcg cgcagagcgc
     2281 acgctcgcgg aagagactcg cgaaatgttc gtgagcacgc aggtgctgca ggagctctac
     2341 gtttcgctca cgaagggcaa aagccccatc gcgacgagcg aagtagccga gcaggcggtg
     2401 cacgaggcgt cgaagtattc ggtcgtgcac atcgacccgg cgctcgtctt ctcggccatt
     2461 gaaatcgcgc gcaagcacaa gatttccttt tgggacgcac taatcgtcgg cgctgccgca
     2521 cgcgccgact gcggggcagt cctgtccgaa gacctgaatg cgggacagat catcgagggg
     2581 gtgcgcatcg agaatccgtt cgcgcacggc cagcggaagc gttgaggaaa acgcgtcacc
     2641 cccagttccg aagccgtacg agctatgacg agctcttgcg caacgttcgg cagcgactcg
     2701 acgcgcgggg agcacggcaa cgagctgacg catcacaact tagtttcatc caaaatgagc
     2761 tcgtggcccg cgctgagacg ccatgcggcc attaagatcg agtcgacgtg caatcttccg
     2821 gcctcgacag atgccacgct attttttggc gcgtatccgg cgcctacgcg cgattaatcg
     2881 cgctaccaaa agccggtgcg cgtcgagcca gaaatgagag cgcttaacgc gcccgcgaga
     2941 cgttgacggc gacgacgacg tgctattttc cccacgagcc cgtttcactt ctccggtgaa
     3001 cgctcggagg cccctttgca ctcgaagcat ttgatctcgg ttactgcact tttgttgtcc
     3061 gcggccgcgt gttcatccac cgcttcggat gacgacttag gcactggcgg ctccggcgct
     3121 tcaggcggac aagtcgggac cggcggcacg catcaaggta gcggcggctc gactgcaacg
     3181 ggcggctcga ccgcgacggg cggttcgacc tcgaccggcg gctcgactgc aacgggtggt
     3241 tcgacctcga ccggcggct
//
LOCUS       DATIML010000704         1906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2452339, whole genome shotgun sequence.
ACCESSION   DATIML010000704 DATIML010000000
VERSION     DATIML010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2452339"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1179
                     /gene="fliD"
                     /locus_tag="VLJ38_12095"
     CDS             <1..1179
                     /gene="fliD"
                     /locus_tag="VLJ38_12095"
                     /inference="COORDINATES: protein motif:HMM:NF018852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HSU40307.1"
                     /translation="TLLGKLQTALEAVDETREVGSYTATSSSNAVAVSANGGALPGSY
                     QISVGSLASEQRTYSDPQNSSSTALGLSGQLGISVGGAATTTISLASGDTLEDIASKI
                     NGSGLRVSASVINDGSQYRLQVRGLDTGAANAISFSGTTLGLDQAENTRQAATDSHVM
                     IDGFTINRPTNQVTGAIPGVTLNLTQTTATNSPVTVQVASDPNGLKTKLNAVITAYNG
                     VIDAVHSAAGFGTAKASVKALASDSMLRSLTNRMSAAVGSLVGNGRYNTLGTIGVSLD
                     ASGHMSLDEDKLGAALQADPNAVANVIAGPSNGDGAIDVMRDVVKSFAQSGTGIFASR
                     ETSLASSAKDLGARIDTEQQRLDDYAAQLRAQFTALDSTMSSTNQSMSYLTSFFGKSG
                     "
     gene            1214..1618
                     /gene="fliS"
                     /locus_tag="VLJ38_12100"
     CDS             1214..1618
                     /gene="fliS"
                     /locus_tag="VLJ38_12100"
                     /inference="COORDINATES: protein motif:HMM:TIGR00208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HSU40308.1"
                     /translation="MLATAVSRYRQVVVSTSTPGELLLALYGGLFRYLKQARALLEAK
                     QRGRAAELVSKARAIIAELDIALDHEASPELCQNLSGLYGFCLDRLRLACREDSVQAI
                     DDVIRVLTPLHQAWQLAVPKAQREQGRADNGR"
     gene            complement(1686..>1906)
                     /locus_tag="VLJ38_12105"
     CDS             complement(1686..>1906)
                     /locus_tag="VLJ38_12105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40309.1"
                     /translation="SGNLATAAHRLARAKRRVFGSRDGIPTLREVLAAARLISERVAN
                     HPGLPSANVLSAEVRDLCIGDLPSRTGT"
BASE COUNT          352 a          685 c          584 g          285 t
ORIGIN      
        1 accctactcg gtaagctcca gacggcgctc gaagccgtcg acgagacgcg cgaagtcggc
       61 agctacacgg cgacgtcttc gtcgaacgcc gttgccgtga gcgcgaacgg tggcgccttg
      121 cccggcagct atcaaatttc cgtcggcagt ctggcctcgg agcagcgcac ctactcggac
      181 ccgcagaatt cgtcgagcac ggcgctcggc ctatcgggcc agctcggtat ctcggtcggc
      241 ggcgccgcaa ccacgacgat ttcgctggcc tccggcgaca ccctcgaaga catcgcctcg
      301 aaaatcaatg gctcggggct gcgcgtgagc gcctccgtca tcaacgacgg cagccaatat
      361 cgcttacaag tgcgcggcct cgacacgggc gccgcgaacg ccatcagctt ctccggcacg
      421 acgctcggcc tcgaccaggc cgaaaacaca cggcaggccg cgacggactc gcacgtcatg
      481 atcgacggct tcaccatcaa ccgtcccacg aaccaggtca cgggcgcgat ccccggcgtc
      541 acgctgaatc tcacgcagac gacggcgacg aactcgcccg tcaccgtgca agtcgcctcc
      601 gatccgaacg gcctcaagac caagctcaac gccgtcatca cggcctataa cggcgtgatc
      661 gacgccgtcc actcggcagc aggcttcggt acggcgaaag ccagcgtcaa ggcgctcgcc
      721 agcgactcga tgttgcgctc gctcacgaac cgcatgtccg ctgccgtcgg ctccctggtc
      781 ggcaacggca ggtacaatac gctcggcacc atcggcgtga gtctcgacgc gagcggccac
      841 atgtcgctcg acgaggacaa gctcggcgcc gcgctccagg cggacccgaa cgccgtggcc
      901 aacgtgatcg cgggcccgag caacggcgac ggtgcgatcg acgtcatgcg cgacgtggtc
      961 aagagcttcg cccaatcggg gacgggaatc ttcgcctcgc gcgagacctc gctcgccagc
     1021 agcgcgaagg atctcggtgc ccgcatcgac accgaacaac aacgactcga cgactatgcc
     1081 gctcagctca gggcacagtt tacggcgctc gactccacga tgagcagcac caaccagtcg
     1141 atgagctatc tcaccagctt tttcggcaag agcggctaac tagccgtcca agaagccacc
     1201 agggtcaaac tccatgttag ccactgccgt cagccgctat cgtcaagtcg tcgtctccac
     1261 gtccacgccg ggcgagctct tgctcgcgct ctacggcggc ctgttccggt acctgaagca
     1321 agcacgcgcg ctgctcgaag cgaaacagcg cggccgcgcc gccgagctcg tctccaaggc
     1381 gcgcgcgatt atcgccgagc tcgacattgc gctcgaccac gaagcctccc ccgagctctg
     1441 ccagaacctg agcgggcttt atggcttctg cctcgaccgg ctacgtctgg cgtgccgcga
     1501 ggactcggtg caggcgatcg acgacgtgat ccgggttctc actccgctcc atcaagcctg
     1561 gcagctcgcc gtgccgaagg cacagcgcga gcagggtcgc gccgacaacg ggcggtagtt
     1621 cgcgactcgc cggcctcgcg ccaggtttcg gggctgggcg gcgcctcagc gagcccgcgc
     1681 gtctctcacg tccccgttcg ggacggcaaa tcgccgatgc agaggtctcg cacctcggcc
     1741 gagagcacgt tcgccgacgg cagcccgggg tggttcgcga cgcgctcgct gatcaagcgg
     1801 gccgcggcga gcacctcgcg caacgtcggg atgccgtcgc gactgccaaa aacgcgacgc
     1861 ttggcgcgcg ctaggcgatg cgccgcggta gcaagattgc cggact
//
LOCUS       DATIML010000705         6184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2452685, whole genome shotgun sequence.
ACCESSION   DATIML010000705 DATIML010000000
VERSION     DATIML010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6184
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2452685"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1185
                     /gene="ftsZ"
                     /locus_tag="VLJ38_12110"
     CDS             <1..1185
                     /gene="ftsZ"
                     /locus_tag="VLJ38_12110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HSU40310.1"
                     /translation="VIGVGGSGGNAINTMIHFGLEGVEFVTINTDAQALGSNAAAEKI
                     AIGQNVTRGLGAGADPERGRKAALEDVNRLKEIVQGADMVFVTAGMGGGTGTGAAPIV
                     AQLAREAGALTVGVVTKPFAFEGKMRSRRAEQGIVALTEHVDTLITIPNEKLMSIADD
                     ELTFVEAFRKADEVLFQAVKGISDLITLDGIVNVDFADVRTVMSGNGRALMGTGCAKG
                     EGRARLAAEQAIHSPLLDDISVQGATGVLINIVGGHDMKMKEIQEAASLVQEQAHDEA
                     NIIFGASIDETMGEALKVTVIATGFNPAEAELPVETAREVRRPAVSLRESLVPRPTSA
                     PAREQVPALSTRRPVAPSLAASARDGQMGLPVLRERIAFPSALDADAEWDVPAFQRRQ
                     GG"
     gene            complement(1266..1883)
                     /locus_tag="VLJ38_12115"
     CDS             complement(1266..1883)
                     /locus_tag="VLJ38_12115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40311.1"
                     /translation="MVWACGGRSQRDLSTNRGGASTGATTGTGGSGAIGGTGAGGAVS
                     NGGDGGDGCFDAGSYHARGSTYPAGDGCSTCTCTPAGSDCSTSTSTCPGGACSTLARE
                     YAVALDRARSCVAGRVGECAGLMPLTLRCGCPTTVNDTRELETLYSAWYSANCDQMAP
                     LPCPACIPLDTLGMFRYCTTDGRCAVSEVTRGGAGQNSDAGAAGQ"
     gene            complement(1980..3545)
                     /locus_tag="VLJ38_12120"
     CDS             complement(1980..3545)
                     /locus_tag="VLJ38_12120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40312.1"
                     /translation="MPAGCGSSRDDYFDKPPTLHAGAPGAGADGTGGSSALTGGTGGG
                     TTGGGSGQGAGGTLSAGGTGATSGGGSGCTSGSLCNGTCIDTQASNSNCGVCGAQCPA
                     RSTCTAGSCVCSDNQSICDGHCVNTLTNLSNCGWCGNVCPPRADCDTGECVCPGDETL
                     CTDTCVDTSQDPMNCNGCGKACPDTAACEDAKCVCPGTEIVCGDQCVDTDTDQDNCGG
                     CGLPCIGGACTGGVCVCPAGKTNCHGTCADLDTDKQHCGSCNVACSDAEICGLPPDVV
                     GAAGAGGGGSGGEGVHECVCPPEREDCSGVCADLTSDMNHCGDCDTACPGDKICSASA
                     CVCTPGTEDCGGGVCANLSSDKDHCGDCDTACPSNQICKNKNCGCPAGSSLCGDTCVD
                     LQNDRNNCNSCGKACSSDQVCSGGQCLRSPCDQLCGSTEAMPLVEDGFRLDPLGTGAH
                     CLEVKGYDPVDTNRRIVCWNFQNGRSLRVNGTSVACLTGAGVALGEPRAGGYCVQVGA
                     GLASYAGVLLPTK"
     gene            complement(3893..4531)
                     /locus_tag="VLJ38_12125"
     CDS             complement(3893..4531)
                     /locus_tag="VLJ38_12125"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSU40313.1"
                     /translation="MALHLGSIAPDFEQDSTEGPIRFHQWIGDSWAILFSHPKDFTPV
                     CTTELGRAANLKAEFDKRHVKMLAVSVDPVTEHKKWIGDIEETQRATMNFPILGDSDR
                     KVAKLYDMIHEEANDTLTVRSVFIIDPNKKIRATITYPASTGRNFGELLRVIDSLQLT
                     DNHKVATPADWKDGDECVIVPSIQDPKELAERFPKGFRALKPYLRLTPQPNK"
     gene            complement(4614..5132)
                     /locus_tag="VLJ38_12130"
     CDS             complement(4614..5132)
                     /locus_tag="VLJ38_12130"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40314.1"
                     /translation="MVDALTPQTLRLRAARIRLVLTDVDGVLTDAGVYYSERGEELRR
                     FSLRDGMGVELLRAGGIETAFLSREDSGIVRARANKLAVKTFLGVRDKLALLPEILAQ
                     SGLTPAGVAFIGDDVNDLPLLCEIAEQGLTGAPADAIDAVRRSVHAVSESVGGHGAFR
                     DFADAILRWRTA"
     gene            complement(5126..5941)
                     /locus_tag="VLJ38_12135"
     CDS             complement(5126..5941)
                     /locus_tag="VLJ38_12135"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU40315.1"
                     /translation="MNGAPSLGGKVAIVTGAAGLLGREHCLALARAGASVVAADLDEE
                     ACRRVAEAVAAECGTATLGIALDITDPASVTNLHARTQSTLGEVDVLVNNAAIDDKFA
                     ASEAAEQSRFDTYALERFRRSLDVNVTGTFLCCQSIGARMAERGKGSIVNVASTYGIV
                     APDQSLYRRPDGVQAFFKSVAYPTSKAAVLGLTRFLAAYFGPRGVRVNALSPGGVEAG
                     QDEWFQAAYARRVPLGRMAERTDYHGAVVFLASDASAYMTGANLVVDGGFTVW"
     gene            complement(5938..>6184)
                     /locus_tag="VLJ38_12140"
     CDS             complement(5938..>6184)
                     /locus_tag="VLJ38_12140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40316.1"
                     /translation="SLLQQELIRRGVLWGGFHNVSFSHTDADVERVLAAYREALPVLK
                     AAVERGRVLESLRGEPVEPVFRKTSQFNTKPVPFGAR"
BASE COUNT         1001 a         2098 c         2122 g          963 t
ORIGIN      
        1 gtgatcgggg tcggtggctc ggggggcaac gccatcaaca ccatgatcca cttcgggctc
       61 gaaggcgtcg agttcgtgac gatcaacacc gacgcgcaag cgctcggctc gaacgcggcg
      121 gccgagaaga tcgcgatcgg ccagaatgtg acgcgcgggc tcggcgcggg cgcggatccc
      181 gagcgcggtc gcaaggcggc gctcgaggac gtgaaccgcc tcaaggaaat cgtgcagggc
      241 gccgacatgg tgttcgtcac ggccggcatg ggcggcggga ccggcacggg cgcggctccc
      301 atcgtcgcgc agctcgcgcg cgaagcgggc gcgctcaccg taggcgtcgt gacgaagccc
      361 ttcgccttcg aaggcaagat gcgctcgcgc cgcgcggagc agggcattgt ggcgctcacc
      421 gagcacgtcg acacgctaat cacgatcccg aacgagaagc tcatgagcat cgctgacgac
      481 gagctcacct tcgtcgaagc gttccgcaag gcggacgagg tgctgtttca agccgtcaag
      541 ggcatcagcg acctcatcac gctcgacggc atcgtgaacg tggatttcgc cgacgtgcgc
      601 acggtcatgt ccggcaacgg ccgcgccctg atgggcaccg gctgcgccaa gggcgaaggc
      661 cgcgcgcggc tcgccgccga gcaggcgatt cattcgccgc tactcgacga catctccgtg
      721 cagggcgcga cgggcgtcct catcaacatc gtgggcggcc acgacatgaa gatgaaggaa
      781 atccaggaag cggcgtcgct cgtccaagag caggcgcacg acgaggcgaa catcatcttc
      841 ggcgcgagca tcgacgagac gatgggcgaa gcgctcaagg tgaccgtcat cgcgaccggc
      901 ttcaacccgg ccgaggcgga gctgcccgtc gagacggcgc gcgaggtacg ccgcccggcc
      961 gtgtcgctgc gcgaaagcct cgtaccgcgc ccgacctcgg cgccggcgcg cgagcaggtg
     1021 ccggcgctct cgacgcggcg gcccgtcgca ccgagcctcg cggcgagcgc ccgcgacgga
     1081 cagatgggtc tcccggtgct ccgcgagcgc atcgcgttcc cgtccgcgct cgacgccgac
     1141 gcggagtggg acgtgcccgc gttccagcga cgtcagggcg gctgagcgtc gcgcggtaag
     1201 cccggctcgc cacggcgaga ccgggctcat ccccgccggt tccgttcgtt ccggggcctc
     1261 gtcgcctact ggccagccgc ccccgcgtcg ctgttttggc cggcaccacc gcgggtcacc
     1321 tccgatacgg cgcacctgcc gtccgtcgtg cagtaacgga acatgccgag cgtatcgagc
     1381 gggatgcagg cgggacaggg aagcggcgcc atttgatcgc aattggcgga gtaccaagcg
     1441 gaatagagcg tctcgagctc gcgcgtgtcg ttcacggtgg tcggacaccc gcagcgcagg
     1501 gtcaatggca tgaggccggc gcattcgccg actcggccgg ccacgcaaga gcgggcgcgg
     1561 tcgagggcga ccgcgtactc cctcgcgagc gtggagcatg ctccaccggg gcaggtgctg
     1621 gtcgaggtcg agcagtcgct gcccgccggc gtgcaggtgc aggtgctgca gccgtctcca
     1681 gcaggatagg tcgagccgcg tgcgtggtag ctgcctgcat caaagcagcc gtcgccgccg
     1741 tcgccgccgt tgctgacagc gccgcccgca ccggtgccgc cgattgcgcc acttccgccg
     1801 gtgccggtcg tcgcgcccgt gctcgcgccg cccctgttgg tcgaaagatc acgctgcgag
     1861 cggccgccgc aggcccagac cacgagtccg agcgacagcg ccagacccca actccctcgg
     1921 ctttggcggc gaacacgacc cacgcgcaca gggtggcgta gggcagggcg cggatcaact
     1981 cacttggtcg gcaagagcac gcccgcgtag ctcgcgagac cggcgcccac ctggacgcag
     2041 tacccgccgg cgcggggttc gccgagcgcg acgcccgcgc ccgtgagaca cgcgacggac
     2101 gtgccgttca cgcgcagcga gcgcccgttc tggaaattcc agcacacgat gcgtcgattg
     2161 gtgtccaccg gatcatagcc cttcacctcg agacagtgcg cgcccgtgcc caacggatcg
     2221 aggcgaaaac cgtcctcgac gagcggcatt gcctccgtcg atccgcagag ctgatcgcac
     2281 ggcgagcgca ggcactggcc gcccgagcaa acctgatcgc tgctgcaggc cttgccgcag
     2341 ctattgcagt tgttgcggtc gttctgcaaa tcgacgcagg tgtcgccgca cagactcgag
     2401 ccggcggggc agccgcaatt tttgttcttg cagatttgat tgctcgggca cgcggtgtcg
     2461 cagtcgccgc agtggtcctt gtcgctgctc aggttcgcgc agacgccgcc gccgcagtct
     2521 tccgtgccgg gcgtgcagac gcaggccgaa gccgagcaga tcttgtcgcc cggacacgcg
     2581 gtgtcgcaat cgccgcagtg gttcatgtcg ctcgtgagat cggcgcagac gccactgcag
     2641 tcctcgcgct cgggcggaca gacacactcg tgcacgccct cgccgccgct gccgccgccc
     2701 ccggctccag ccgcaccgac gacatccggc ggtaggccgc agatctcggc gtcgctgcac
     2761 gcgacgttgc agctgccgca gtgttgtttg tcggtgtcga gatccgcgca agtcccgtga
     2821 caattcgtct tgcccgcggg gcagacacag accccgccgg tgcaggcgcc gccgatgcag
     2881 ggcaacccgc aaccgccgca gttgtcttgg tcggtgtcgg tgtcgacgca ctggtcgccg
     2941 cagacgattt ccgtgcccgg acagacgcac ttggcgtcct cgcaggcggc cgtgtcgggg
     3001 cacgccttgc cgcagccgtt gcagttcatg ggatcctgcg acgtatcgac gcaggtgtcg
     3061 gtgcacagcg tttcgtcgcc gggacagacg cattccccgg tatcgcaatc ggcgcgcggc
     3121 ggacagacgt tgccgcacca gccgcaattc gaaaggttcg tgagcgtgtt gacgcagtgc
     3181 ccgtcgcaga tcgactggtt gtcgctgcag acgcagctgc cggccgtgca cgtggagcgc
     3241 gccggacact gcgcgccgca cacgccgcaa ttcgagttgc tcgcctgtgt atcgatgcag
     3301 gtgccgttgc agagcgagcc cgaggtgcac ccggagccgc cgccgctcgt cgcgcccgtg
     3361 cctccggcgc tgagcgtccc gcccgcgccc tgtccggagc cgccgccggt cgtgccgccg
     3421 ccggtcccac ccgttagggc gctcgagccg cccgtcccgt cagcgccggc accgggggct
     3481 ccggcgtgca gggtcggggg cttgtcgaaa tagtcgtcgc gactcgagcc gcaacccgcc
     3541 ggcaacgcca gcgcgactcc aagaaagaaa agcgagaaag tgaaacgtga cttaggggcc
     3601 acgaaagcag tccgatgcaa tggcgaggac gtatcttagc cggcttcgag cgagcgcaac
     3661 ctgcgcgatg cgccagcact ttatcccagg cgcaaaaggg cggcactggc ataattgccc
     3721 cccgtccttc ggccggccct gtctgcgtcg agcggcctcg gaaggcccga actcgggctt
     3781 cccgccatca ccgcaacgtc tgcgcttgtg ggctgaggtg cgcacgagcc tcgacgccga
     3841 cgagttcgtc gtcgaggctc cgctgcgcgg tcgaagccgc tcggcccgcg cgttatttgt
     3901 tcggttgcgg cgtgaggcgc aggtacggct tgagcgcgcg gaagcccttc gggaagcgct
     3961 cggcgagctc cttcggatct tggatcgagg gcacgatgac gcactcgtcg ccgtccttcc
     4021 agtcggcggg agtcgcgacc ttgtgattgt cggtgagttg cagcgagtcg atgacccgca
     4081 ggagctcgcc gaagtttctg cccgtgctcg cggggtaggt gatcgtggcg cggatcttct
     4141 tgttcgggtc gatgatgaag acggaacgta cggtgagcgt gtcgttcgcc tcctcgtgga
     4201 tcatgtcgta gagcttggcc accttgcgat cggagtcgcc gaggatgggg aaattcatcg
     4261 tcgcgcgctg cgtctcttcg atgtcgccga tccacttctt gtgctcggtg accggatcca
     4321 cgctcacggc cagcatcttg acgtgacgct tgtcgaactc ggctttgagg ttcgcggcgc
     4381 ggccgagctc ggtcgtgcac acgggcgtaa agtccttcgg gtgcgaaaaa agaatcgccc
     4441 agctatcgcc gatccactga tggaaccgaa tcgggccctc cgtggaatcc tgttcgaaat
     4501 cgggtgcgat gctgccgagg tgcagtgcca tgagtttctc cttcactgtg ctttacggca
     4561 tgcggccgtg aagcgcttag gggcgtagga ctcgctggtg cgcgaggcaa gcctcaagcc
     4621 gttcgccagc gcaaaatggc atcggcgaag tcacgaaatg ccccatgacc gccgaccgac
     4681 tcgctcacgg cgtgaaccga gcgccgcacc gcgtcgatcg cgtcggcggg cgcgcccgtg
     4741 agaccctgct cggcaatttc gcaaaggagc ggcaagtcgt tcacgtcgtc gccgatgaag
     4801 gcgaccccgg caggcgtgag gccgctctgc gccaggatct ccggcaagag cgcgagctta
     4861 tcgcgcacgc cgaggaacgt cttgacggcg agcttgttcg cgcgggcgcg cacgatgccg
     4921 gagtcttcac gcgagaggaa cgccgtttcg atgccgccgg cgcgcaggag ctcgacgccc
     4981 atgccgtcgc gcagtgagaa gcggcgcagc tcctccccgc gctccgaata gtagacaccc
     5041 gcgtcggtga gcacgccgtc gacgtccgtg agcacgagcc gaatgcgagc ggcgcgcagg
     5101 cgcaacgtct ggggggtgag cgcgtctacc aaaccgtgaa acctccgtcg accacgaggt
     5161 ttgcgcccgt catgtaggcg gaggcgtcgc tcgcgagaaa gaccacggca ccatgatagt
     5221 ccgtgcgctc cgccatgcga ccgagcggca ctcgccgcgc gtacgcggct tgaaaccact
     5281 cgtcttggcc cgcttcgacg ccgccgggcg agagtgcgtt gacgcgcacg ccgcgggggc
     5341 cgaaataggc ggccagaaag cgcgtgagcc cgagcaccgc ggctttgctc gtcggatacg
     5401 ccaccgattt gaagaacgcc tgcacgccgt ccggacggcg atagagcgac tgatcgggcg
     5461 cgacgatgcc gtaggtggag gccacgttga cgatgctacc cttgccccgc tcggccatgc
     5521 gcgcgccgat gctctgacag cagaggaacg tgccggtgac gttcacgtcg agcgagcgcc
     5581 gaaagcgttc gagcgcgtag gtgtcgaagc gggactgctc ggccgcttcc gaagccgcga
     5641 atttgtcgtc gatagcggcg ttgttcacga gcacgtcgac ctcgccgagc gtgctctgag
     5701 tgcgggcgtg caggttcgtg acggacgccg gatcggtgat atcgagcgcg atgccgagcg
     5761 tggcggtgcc gcattcggca gcgacggcct cggcgacccg cctgcacgcc tcctcgtcga
     5821 ggtcggccgc gacgacgctc gcccccgcgc gcgcgagcgc caaacaatgc tcgcgaccga
     5881 gcaaccccgc ggcgcccgtc acgattgcga ctttgccgcc gagcgaaggc gcgccgttca
     5941 tcgcgctccg aacgggaccg gcttggtgtt gaactggctc gtcttgcgaa acacgggctc
     6001 gaccggctcg ccccgcaggc tttcgagcac gcggccgcgc tcgacggcgg ctttgagcac
     6061 cggcaatgcc tcccggtagg cggcgagcac acgctcgacg tccgcgtccg tgtgcgaaaa
     6121 ggacacgttg tgaaagccgc cccagagcac gccacgccgg atgagctcct gctgcaggag
     6181 cgac
//
LOCUS       DATIML010000706         9378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1304536, whole genome shotgun sequence.
ACCESSION   DATIML010000706 DATIML010000000
VERSION     DATIML010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 9378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9378
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304536"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VLJ38_12145"
     CDS             complement(<1..192)
                     /locus_tag="VLJ38_12145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40317.1"
                     /translation="MTSSPFDLVNVLLVDNDRGRLARSCGWLLAKGYDVTTRSTGHEL
                     TKAVRELRPAIVLIDVLVPD"
     gene            349..1023
                     /locus_tag="VLJ38_12150"
     CDS             349..1023
                     /locus_tag="VLJ38_12150"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HSU40318.1"
                     /translation="MHAQPLSPAELAALSIFPLPEATLFPGALLPLHVFEPRYRALVT
                     DALAGSRTLAVARLKPGFESDYGGRPPVFDVCGAGRIVEHTLLPDGRHNVMLLGLARV
                     RLVRELPAAQMYRVVRAELIADLPFDPRLSATLEQEVVSLWRTLGPRLPEAVRDLSEV
                     TRGAADAGHFADRIAALIAGDPEASQALISEPDPCERLRLIVEQLRAAVVALGVRAPA
                     GKPTLN"
     gene            1286..2953
                     /locus_tag="VLJ38_12155"
     CDS             1286..2953
                     /locus_tag="VLJ38_12155"
                     /inference="COORDINATES: protein motif:HMM:NF012925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding domain-containing protein"
                     /protein_id="HSU40319.1"
                     /translation="MGAYSKLLALLLLVASAHAEAKPWKGAELGSQQTFKYGAFEARV
                     RAAEGSGMITAFFLWKYGSEVPGALWQEQDIEIFGRDGDYQTQLITPGKNGAQRTEHV
                     VNQLLLSPAWTRYYTYRLEWTPNYLAFFVDGQEVRRETDAVEFAKFLDSSQAEAAQIR
                     LSLWAADTTWSGSFDASRVPSDVFVNWVQTYSYTPGTGPNGSDFTPLWRDEFNTLDTS
                     RWQLSNWTFDAAVNDYVPQNAAAKDGKLVLVLTSEQSTGVFPAPPADDGSLNPPPGPT
                     GPWPLPFRIEAEAFARYSDTTPGNIGGACRNTDVDLEVTQDPNGGQCHVGWTDPGEWL
                     EYDVRVAAAATFDLTLRVASLIADRQLHVEIDGIDVTGPLTVPANGWQAFADLTVPDV
                     DLTAGAHVVRLAFDTGYLNVNYFEFTSTGESNVPPPACTPSTHTYEAETMSATTGGSA
                     PGGWNLWSNGSLSTTHDFVGGDSIIRVSAYGQSAQGVWPHLSVRVGSQTIGDVSVSAT
                     KYTPYEFAYTALGGPQTVSVAFDNDYYANGQDRNLYIDSVSIDECFD"
     gene            3036..3452
                     /locus_tag="VLJ38_12160"
     CDS             3036..3452
                     /locus_tag="VLJ38_12160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II truncated hemoglobin"
                     /protein_id="HSU40320.1"
                     /translation="MTSTQTPGRDLFNPFTNMGGEARVRELVERFYDEMEAHEPELAA
                     LHQHENGHISRATRERFALFLIGWLGGPEHYVQRYGHPRLRMRHAHVPVNAGTRDAWL
                     RSMQRALDAQELEPDTRDFLRARFAEVADFLRNEAG"
     gene            3706..4224
                     /locus_tag="VLJ38_12165"
     CDS             3706..4224
                     /locus_tag="VLJ38_12165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40321.1"
                     /translation="MAVAGHSAMTSGASGVSGSDAGRASSDGGSGTRCDDSSLVWRSA
                     NKTNYTSYPDPGSEECVKYNGCMWAGQFAACDAKQSEAWVSEHDIVAAFPDFDALKLH
                     DLCLRRGTKTIVVTVLDTCGDDDCGGCCTQNRGSADELIDVESYTDARWGVPDGPIEW
                     ADLGPTATSGCR"
     gene            complement(4477..5280)
                     /locus_tag="VLJ38_12170"
     CDS             complement(4477..5280)
                     /locus_tag="VLJ38_12170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40322.1"
                     /translation="MGDRSAPQGGAGTGGRASTANGEITPDGSGWVDPASNDLGIQGA
                     FYPYGDRYGVAKCLNVGMHAPDECSLITTPAPPPATGFPNQDGKLCTTGATAVILPCK
                     AGVTTSGCPDHDFSNMWGAGIGFDFNAPGGTDGTTVKSPWNPDEHGVLGVAFELDAVP
                     APGLRVEFPLRLTDSEAQTVNLPPGSTTDDHPDGAPYWGGNATFSNSPVRAGHNELYW
                     ADVKKPGTTPSYVFDKARLLGIQFHVPAVQTPPPGAYSFCVSHLTLLRQ"
     gene            5700..6167
                     /locus_tag="VLJ38_12175"
     CDS             5700..6167
                     /locus_tag="VLJ38_12175"
                     /inference="COORDINATES: protein motif:HMM:NF019140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40323.1"
                     /translation="MGTAKKPTRAAQTIPPALRRQLLRRDGGRCQVPGCRHATFVDVH
                     QLRPRSEGGANTLENLALCGAHHRASHAGKLSSAGTPSKHLSLLHADGTPYGHAPLPP
                     IAELRASAYRALTHLGFRESEAKWALARAPLTTNVTLEDMIRQTLRELARERH"
     gene            6421..6855
                     /locus_tag="VLJ38_12180"
     CDS             6421..6855
                     /locus_tag="VLJ38_12180"
                     /inference="COORDINATES: protein motif:HMM:NF021443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LiaF domain-containing protein"
                     /protein_id="HSU40324.1"
                     /translation="MQIQPLEKKLRFATAEDWFEEDEFEELSEPFITDEECFEQGAAF
                     DGFRIEVRSRNFRSGRVTAVVSGVTIDLREALPSPEGATLDVQSTLSGITILVPKHWE
                     VSCEVEAFCGGISQDRFAAAPDTSPPRLRVTGTVVAGGLSVR"
     gene            6869..7678
                     /locus_tag="VLJ38_12185"
     CDS             6869..7678
                     /locus_tag="VLJ38_12185"
                     /inference="COORDINATES: protein motif:HMM:NF021443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5668 domain-containing protein"
                     /protein_id="HSU40325.1"
                     /translation="MRRKRGPGIWPGFILVSLGAGLLAREFGLVPHHVRVVDFWPLFV
                     VIMGVSALTRARGVIAGFFALAFVAMGALLLAGNLGMIAFPAARLWPGLLVLMGLSFI
                     VRGRHRHGFRAHWEQPGAYGSGSGEGGAGDEGDGGRADGRELRADESFHKHAQTTDAD
                     QLRRQYTFSGAQLNIESQAWRGGELGVTAGGVEIDLRHARLAPEGAVLDLRIVMGGVD
                     IRVPDTWPVYCEVTPLFGGADDTTRTTQGSADAPRLRITGTVTLGGVTVRH"
     gene            7716..8780
                     /locus_tag="VLJ38_12190"
     CDS             7716..8780
                     /locus_tag="VLJ38_12190"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HSU40326.1"
                     /translation="MHPLLAQRRSLTAYLSFWAGLSVVPWLLLHSAAELGAFLLALIC
                     TLAFALVTLPSWYLCRALPLDPGRLGRVVSAQGAAAVVCSLVFLVCWKAFVEVLALVP
                     AWHRLPGDVDAAELALLGVGALFYVLVATFHYMLSELELRRDAIEREGALALNAQRAE
                     LQALRAQVHPHFLFNSLNTVNALIGYDTGKAREACVLLADYLRGTLGAQEHALVPLSE
                     EWALCERYLNVETLRLGDRLKVDVELDPDARACLVPSLLLQPLVENAMTHGIASVDEP
                     APLCVRARRLAERLLVEVENGIDPLPRRRPGGVGLANVRARLVAHYGSDAVLRIERDS
                     AHFRVVLDLPARAPETKDAG"
     gene            8777..>9378
                     /locus_tag="VLJ38_12195"
     CDS             8777..>9378
                     /locus_tag="VLJ38_12195"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU40327.1"
                     /translation="MTKLASERRVLVADDEEPARRLVVEYLRAHPSFTLVGEAKHGLE
                     AVRLASTEKPDLILLDVQMPKLDGFEVLGLIPSDVAVVFTTAFDEYAVHAFEVHAVDY
                     LLKPFTAERFAQALARVEKRLGAPRALAAPELAQAARAPGTFLDRLVIRDGVEILIIP
                     TRSIDFVKGQDDYVEVFHDGRSSLTQQTLQSLETSLDPRQ"
BASE COUNT         1519 a         3160 c         3133 g         1566 t
ORIGIN      
        1 gtcgggaacc agcacgtcga tcagcacgat cgcgggccgg agctcgcgca ccgctttggt
       61 gagctcgtgc cccgtgcttc gcgtcgtcac gtcgtagccc ttggccagca gccagccgca
      121 gcttctcgcg agccgaccgc gatcgttgtc cacgagcaag acgttcacga gatcgaaagg
      181 cgagctggtc actgaggaag ccgagtcggt tgccaggcga acggtcgttg cggccggccg
      241 ctttagagcg cctgcgcctt ttgctgcgaa atgcgcgcga gctagacgta tccgacaagg
      301 tgagcgcgcc ggggtcgtcg cggccggcgc gtgtggcagg atcgccgcat gcacgcgcag
      361 ccgctgtccc ccgccgagtt ggcggcgctt tccatctttc cattaccgga agcgacgttg
      421 tttccgggag cgctcttgcc gctccacgtt ttcgagccgc ggtaccgcgc gctcgtgacc
      481 gacgcgctcg ccggctcacg cacgcttgcc gtcgcgcgct tgaagcctgg cttcgaatcg
      541 gactacggcg gccggccgcc cgtgttcgac gtctgcggcg cgggtcgcat cgtcgagcac
      601 acgctgctac ccgacggccg ccacaacgtc atgctgctcg gcctcgcgcg cgtgcgcctg
      661 gtccgggagc tgcccgctgc gcaaatgtac cgcgtcgtgc gcgcggagct cattgccgac
      721 ctaccgttcg atccgcgctt gagtgcgacc ctggagcaag aggtcgtctc actttggcgc
      781 acgctcggac cgcgcttgcc cgaagcggtg cgcgacctca gcgaggtgac gcgcggcgcg
      841 gcggacgcgg ggcacttcgc cgatcgtatc gcagccctga tcgcgggcga ccccgaggcg
      901 agtcaggcgc tgatctcgga gccggacccg tgcgagcggc tgcgcctcat cgtcgaacaa
      961 ctgcgtgcgg cagtggtggc actgggcgtg cgcgcgccgg ccgggaaacc gaccttgaac
     1021 tgaagtcgac cgtctcgtgc gggaaccgtc cgaacgtttc ggacggacac atgccatgcg
     1081 gcgtttgccg gtgagcgcgg cagtagtgcc tcagcgcgac aagttggacg tgcggcgggc
     1141 ccttgcgaca atcgataacc cgggcgagtg tggtttgtac gatcctggtc gcttggcccg
     1201 cattctgcag cctcgcgcaa cgacgcgtcc gtcgagccgg tcgtgctcgg cccgtcacat
     1261 caccaatatg tcgaactcaa ccgccgtggg cgcttactcg aagctactcg ctttgctgct
     1321 gctcgtcgcg agcgcgcacg ccgaagccaa accttggaaa ggagcggagc tcggctcgca
     1381 gcaaacgttc aagtacggcg ccttcgaagc gcgcgtccgt gcggccgagg gctcgggcat
     1441 gatcaccgcg ttttttctgt ggaagtacgg gtccgaagtg cccggcgcgc tctggcaaga
     1501 gcaagacatc gagatcttcg gccgtgatgg ggactatcaa acgcaactca tcacgccggg
     1561 gaagaacggc gcacagcgca ccgagcacgt cgtcaaccag ttgctcctga gtcccgcctg
     1621 gacgcgctac tacacgtatc gcctggagtg gacgccgaac tacctcgcct ttttcgtcga
     1681 cgggcaagag gtgcggcgcg agaccgacgc cgtcgagttc gcgaagttct tggactcctc
     1741 gcaggccgag gccgctcaga tccgtctgag cctctgggcg gctgacacga cgtggtcggg
     1801 cagcttcgac gccagccggg tcccgagcga cgttttcgtc aattgggtgc agacgtattc
     1861 gtacacgccg gggaccggac cgaacggcag cgatttcacg ccgctctggc gtgacgaatt
     1921 caacacgctc gacacgagcc gctggcagct ctccaactgg accttcgacg cggcggtcaa
     1981 cgattacgtc ccgcaaaatg ccgcggcgaa ggacggcaaa ctcgtgctcg tgctcacgag
     2041 cgaacagtcg accggtgtct ttccggcgcc gcctgccgat gacggcagtc tgaatccacc
     2101 gccgggcccg acgggtccgt ggccgctccc gttccggatc gaagccgaag cgttcgctcg
     2161 ctactcggac acgacgccgg gcaacatcgg cggggcgtgc cggaacaccg acgtcgacct
     2221 agaagtcacc caggacccca acggaggaca gtgccacgtc ggctggacgg atcccggaga
     2281 gtggctcgaa tacgacgtgc gcgtcgctgc agcggcgacg ttcgacctga cgctacgcgt
     2341 cgcctcgctg atcgccgacc gacagctgca cgtggagatc gacggcatcg acgtgaccgg
     2401 cccgttgacg gttcccgcga acggctggca agcattcgcg gacttgaccg taccggacgt
     2461 ggacctcacg gccggtgccc acgtcgttcg cttggcgttc gataccggct acctcaacgt
     2521 caactacttc gaattcacgt caaccggcga gtcgaacgtc ccgccgcccg catgcacacc
     2581 gtcgacgcac acgtacgagg ccgagacgat gtcggcgact accggcgggt ccgcgcctgg
     2641 cggctggaat ctatggtcga acggcagcct ctcgacgacg cacgacttcg tcggcggaga
     2701 cagcattatc cgcgtctcgg cctacggcca gagcgcgcaa ggcgtctggc cgcacctgag
     2761 cgtgcgcgtc ggcagccaaa cgatcgggga cgtgagcgtc agcgcgacga agtacacgcc
     2821 ctacgaattc gcttacacgg cgctgggcgg gccccaaacc gtgagcgtcg ctttcgacaa
     2881 cgactattac gccaacggtc aggatcgcaa cctctacatc gactccgtct cgattgacga
     2941 atgcttcgac tgaggcggtc agagcgttcg caagccggcg tggccctcgg ggggcgtcga
     3001 gtcgtcggcg ccgtgttgcg ctagactaaa agacggtgac cagcacgcaa actcctggac
     3061 gcgacctctt caacccgttc accaatatgg gcggtgaggc ccgcgtgaga gagctcgtcg
     3121 agcgctttta cgacgaaatg gaagcgcacg agcccgagct cgccgcgctc caccaacatg
     3181 agaacggcca catcagccgc gcgacccgcg agcgcttcgc gttgttcttg atcggctggc
     3241 tcggcggccc cgagcactac gttcaacgct acggacatcc ccgcttgcgg atgcggcacg
     3301 ctcacgtgcc cgtgaacgcg ggcacgcgcg acgcgtggct ccgtagcatg cagcgcgccc
     3361 tggacgcgca ggagctcgag cccgacaccc gcgacttctt gcgcgcaaga ttcgccgaag
     3421 tcgccgattt cttgcgcaat gaggcgggct agccggaacc caatgcgcgc gcacaccgca
     3481 ctggctcgtc ggactttggc gcgtgcgttc gtctggcttt cggccgcagg cgccgtagcc
     3541 gcttgcagcc aaccggacgc tccgcatcga gctgcggccg cgggcagcgg acccacgggc
     3601 ggcgttggag gctttgctag cgacacggcg ggacgtggca cgagcgcggg gcgcggagct
     3661 ggcaccagcg ccgggcgagg cggaaccgtt gccggagagg gcggagtggc ggtggccggc
     3721 cacagcgcga tgacgagcgg cgcgagcgga gtgagcggca gcgacgcagg tcgcgcttct
     3781 tcggacggcg gctccggaac ccgatgtgac gattcgtcgc tcgtctggcg cagcgcgaac
     3841 aagacgaact acacgtcgta tcccgatccc gggagcgaag agtgcgtgaa atacaacggc
     3901 tgcatgtggg ctgggcagtt tgccgcgtgc gacgcgaagc agagcgaggc gtgggtttcc
     3961 gagcacgaca tcgtggcggc cttcccggat ttcgacgcgc taaagctcca cgatctgtgt
     4021 ctgcgccgag gcaccaagac catcgtcgtc accgtgctcg acacgtgcgg cgacgatgat
     4081 tgtggcggtt gctgcacgca aaatcgcggc tccgccgacg agctcatcga cgtcgagtcg
     4141 tacacggacg cgcgctgggg cgtgccggac ggacccattg aatgggcgga tctcggaccg
     4201 acggcgacga gcggctgtcg ctagtcgaag ccctcccccc ccgagcgaga cgcactcgct
     4261 cccccacccc caacgccggg catgcacccg caataccccc tgccaatccc gcctccgtcg
     4321 agcccacctg tgccactcct gaaatctttg cggttccgac gggcgcgcta gcgcgcagcc
     4381 tcacgaaaac gtgtcggcgc catgaccact attggatgat gcccgctcgg tgcccgaacg
     4441 atcacggctg caccaattcg ccccccccct cgccagtcat tgtcggagca acgtcagatg
     4501 actcacgcaa aaggagtacg cgccgggggg aggcgtttgg accgccggca cgtgaaattg
     4561 aatgccgagc aggcgtgcct tatcgaagac gtaggacggc gtcgtgcccg gcttcttcac
     4621 gtccgcccag tagagctcgt tgtgcccggc gcggaccggt gagttggaaa aggtcgcgtt
     4681 ccccccccaa tacggcgcgc cgtccgggtg atcgtccgtc gtcgagccgg gcggcaggtt
     4741 gacggtctgg gcttcactgt cggtcaaacg cagcgggaat tccacacgca ggccgggcgc
     4801 tgggacggcg tcgagctcga acgcgacccc gaggacgccg tgctcgtcgg ggttccacgg
     4861 actcttgacc gtggttccgt cggtgccgcc cggcgcgttg aagtcgaagc cgatgccggc
     4921 gccccacatg ttcgaaaagt cgtgatcggg acaaccggag gtcgtcacgc ccgctttgca
     4981 cggcaaaatg acggccgtcg cgccggtcgt gcacagcttg ccgtcttggt tcggaaagcc
     5041 cgtggccggc ggcggcgctg gcgtcgtgat gagcgagcat tcgtcgggcg cgtgcatacc
     5101 gacgttcagg cacttggcga caccgtaacg atcgccgtac gggtaaaacg cgccttggat
     5161 cccgaggtcg ttactcgcag ggtccaccca gcccgagccg tcgggcgtga tttcgccgtt
     5221 ggccgtgctc gctcgtccgc ccgtgccggc gccaccctgc ggcgctgagc ggtcacccac
     5281 aggtgactga ttggcgcagg cgctcgctgc gacgcaaatc gccgtgagcg ccaacgttct
     5341 gagtgacgtg cgtcgccgtc gtgggtctcg ttccatgtcg tcgcctcccg cgttcgagtc
     5401 cgacggacgc tgagtgcaac cgatgtgccg agtgcgcgct gctcgtaaaa cgcagagcaa
     5461 accgcggaca aatggcgacc gctgcaagcg gtctcggatg cagggaacgt ccggacggac
     5521 gtcggcgcgg acgtccgcgt cggggcggcg tcggacgacg tcggtgtggt gttgcagcga
     5581 actcgcgctg ggctgaaaga gcagctgatc cgtcgatttg tatggacagc tttccgtcga
     5641 cgaagtgcgc gcgtccgttc gacgagctct aaatagtgtc gtcgcgcgcg ggaacccacg
     5701 tgggcacagc gaagaagccc acgcgcgcag cgcaaaccat cccgcctgct ctccggcgcc
     5761 agctgctgcg ccgcgacggc ggacgttgcc aggtgcccgg ttgccggcac gcaacctttg
     5821 tcgatgtgca ccagctgcgg cctcgctccg aaggcggcgc gaacacactc gaaaatctcg
     5881 ccctctgcgg cgcgcaccat cgtgcaagtc acgccggaaa gctttcgagc gcagggacgc
     5941 cgtccaagca tctcagtttg ctgcacgctg acggcactcc ttacggacat gcacccttgc
     6001 cccctatcgc cgaactacgc gcgagcgcct atcgcgccct cactcacctc ggcttccgcg
     6061 agtcggaggc gaaatgggcg ctcgctcgtg ctcctctcac gaccaacgtc acgctcgaag
     6121 acatgatccg ccaaacgctg cgcgaactcg cccgagaacg gcactaactc tagggctcgg
     6181 gcggcggggc agcaccaccc ggccggccgt gcttcgctgt ggctcagcgt gtctgctcag
     6241 ggcagccgca acgcggcgag cacggacggt ggggtgggca gtacacccgt ccgccggcag
     6301 gcctccgccg ttcaccggta ggcccgcggc gttcgccgaa gcgcgcgggc tcgaggcagg
     6361 ttggtcccct agtttgagtt tcacgagagg tcgctccgga gagcgcccgt ggaggtcaaa
     6421 atgcaaattc aaccgttgga aaaaaagctg cgcttcgcga cagcggagga ttggttcgag
     6481 gaagacgagt tcgaggagct gagcgagccg ttcatcaccg acgaggagtg cttcgagcag
     6541 ggcgccgcgt tcgacgggtt tcgcatcgag gtgaggtcgc gcaatttccg cagcggtcgc
     6601 gtcaccgcag tggtgtcggg cgtgacgatc gacctgcgtg aagcgctgcc gagcccggag
     6661 ggcgcaacgc tcgacgtgca gtcgacgctc agcgggatca ctattttggt gcccaagcac
     6721 tgggaagtct cctgcgaggt cgaagccttc tgcggcggca tcagccagga tcgcttcgct
     6781 gcggctcccg acacgtcgcc gccgcggctg cgcgtgaccg gcacggtcgt agccggcggc
     6841 ctgagcgtgc gataggaggt gtgtcgtgat gcgcagaaaa cgcggacccg gaatatggcc
     6901 gggtttcatt ttggtttcgc tcggcgcggg gctgctcgcg cgtgagttcg gtctcgtgcc
     6961 gcaccacgtg cgagtggtcg atttttggcc cttgttcgtg gtgatcatgg gtgtctcggc
     7021 gctcacgcgc gcgcgcggcg tcatcgccgg gttcttcgcg ctcgcgttcg tggccatggg
     7081 cgcgctcctg ctcgcgggca acctcgggat gatcgcgttc ccggccgcac gcctctggcc
     7141 cgggctgctc gtcttgatgg ggctctcgtt catcgtgcgc gggcggcacc ggcacggttt
     7201 tcgcgcccat tgggagcagc ccggcgcgta cggcagcggc agcggcgaag gcggagctgg
     7261 tgacgagggc gacggcggga gggctgacgg gcgcgagctg cgcgcggacg aatcgtttca
     7321 caagcacgcg caaacgacgg atgccgatca gctgcgccgg caatacacgt tctccggcgc
     7381 tcagctcaac atcgagtccc aggcgtggag aggaggcgag ctcggcgtca cggcgggcgg
     7441 cgtggaaatc gacctccgtc acgcgcggct cgcacccgaa ggcgccgtgc tcgatctgcg
     7501 catcgtgatg ggcggcgtcg atatccgcgt gcctgataca tggccagttt attgtgaggt
     7561 gacgccgctc ttcggcggcg ccgacgacac gacgcgtacg acgcagggct cggccgacgc
     7621 tccccgcctg cgcatcaccg gtacggtaac gctcggcggc gtgaccgtgc gtcactgagc
     7681 ttccgctcag caccgacttt cttccgagtt tcgccgtgca tcccctgctc gcccagcgcc
     7741 gctcgctcac ggcttacctc tcgttctggg cgggcctgtc cgtggtgccg tggctgctct
     7801 tgcattcggc ggcagagctc ggcgccttct tgctcgcgct gatttgcacg ctcgcgttcg
     7861 ccctggtgac gctgccgtcc tggtatctct gccgcgcgct tccgctcgat ccgggacggc
     7921 tcgggcgcgt cgtctcggcg caaggcgcgg cggccgtcgt gtgcagcctc gttttcctcg
     7981 tgtgctggaa ggcgttcgtc gaagtgctcg cgctcgtgcc cgcctggcac aggctgccgg
     8041 gggacgtcga cgcagcggag ctcgccttgc tcggcgtggg agcgctgttt tacgtgctcg
     8101 tcgcgacctt ccactacatg ctctccgagc tcgagctgcg gcgcgacgcc atcgaacgcg
     8161 agggcgcgct cgcgctgaac gcgcaacgcg ccgagctcca ggcgctccgc gcgcaagtgc
     8221 acccccactt cttgttcaac agcttgaaca ccgtgaacgc gctcatcggc tacgacaccg
     8281 gcaaggcgcg cgaggcctgc gtcctgctcg cggattacct gcgcggcacg ctcggcgcgc
     8341 aagaacacgc gctcgtgccg ctcagcgaag aatgggcgct ctgcgagcgc tatctcaacg
     8401 tcgagacgct gcgcctaggc gaccgactca aagtagacgt ggagctcgac ccggacgctc
     8461 gcgcgtgcct cgtgccgtcg ctgctgctcc agccgctcgt ggaaaatgcc atgacgcacg
     8521 gcatcgccag cgtcgacgag ccggcgccgc tctgcgtgcg cgcgcgccgg ctcgccgagc
     8581 gactcctcgt cgaggtcgag aacggcatcg acccgctgcc gcgccgccgt ccgggcggtg
     8641 tggggctcgc gaacgtgcgc gcccggctcg tcgcccatta cggctcggac gcggtgttgc
     8701 gcatcgaacg cgattctgca cacttccgcg tcgtgctcga cttgccggcg cgcgcaccgg
     8761 aaaccaagga cgcaggatga cgaagctcgc gagcgaacgc agggtactcg tcgccgacga
     8821 cgaagagccc gcccgacgtc tggtcgtcga gtacctgcgc gcgcacccga gcttcaccct
     8881 cgtcggcgaa gcgaaacacg ggctcgaagc cgtgcggctc gcgagcacgg agaagcccga
     8941 tctgatcctg ctcgacgtgc aaatgcccaa gctcgacggc ttcgaggtgc tcggcttgat
     9001 tccttccgac gtagcggtcg tcttcacgac ggcgttcgac gagtacgccg tgcacgcgtt
     9061 cgaagtgcac gcggtagact acctgttgaa gccgttcacg gccgaacgct tcgcgcaggc
     9121 gctcgcacgc gtcgaaaagc gcctcggtgc gccgcgagcg ctcgcggcgc ccgagctcgc
     9181 gcaagcggcg cgcgcgccgg gaacctttct ggatcggctc gtgatccgcg acggcgtcga
     9241 gatcctcatc attccgaccc gctcgatcga cttcgtgaaa ggccaagacg actacgtcga
     9301 ggtgtttcac gacggccgct cgtcgctcac gcagcagacg ctgcagagcc tcgaaacgag
     9361 cctcgacccg cgacagtt
//
LOCUS       DATIML010000707         4148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2454258, whole genome shotgun sequence.
ACCESSION   DATIML010000707 DATIML010000000
VERSION     DATIML010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4148
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2454258"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VLJ38_12200"
     CDS             <1..426
                     /locus_tag="VLJ38_12200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40328.1"
                     /translation="VRVRFRLPTGKAQEAAAELARREPAAALAGLVAACVVEIQDEHG
                     ERLDALPPSLVAPLGAVLEALDPQAETRVSMTCVTCGAPFEALLDAATLLFAELGPGR
                     IFRDVHVLASRYHWSEAAILRLSSERRRHYLALIGEEAS"
     gene            423..1295
                     /locus_tag="VLJ38_12205"
     CDS             423..1295
                     /locus_tag="VLJ38_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40329.1"
                     /translation="MSFFANLLRRGIGEVPNLGGRALPLVSPVREEERFIAAPASQAV
                     SQNAPAGDLVSRKASAPFVAPAPVVAFPARVAAPPAPGDVPPPRAVIAEESVARESVA
                     PIARPVMPANLQAAAPAKPAQSLLSPPPFSPLAGATEASELTDAPASQGVPLVVATPL
                     RTLVVRETMRELVERSVPAVATEPAVSPAGGAAPLKRGPREAPSPLATPPSAAARDLR
                     SATRAALRPEAEATPRYEPAPPLVAPAAQAEVRIERIEILAESTPAPSVEPAPAPRGF
                     DAYLFARSYVRRAR"
     gene            1295..1522
                     /locus_tag="VLJ38_12210"
     CDS             1295..1522
                     /locus_tag="VLJ38_12210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40330.1"
                     /translation="MRVVIERLVLRGAVEAQRVPWLRARLERELGRALSGLGAEVAAA
                     SVPVPPLDHPGFPAAVAARVRGAVARARRGA"
     gene            1519..2211
                     /locus_tag="VLJ38_12215"
     CDS             1519..2211
                     /locus_tag="VLJ38_12215"
                     /inference="COORDINATES: protein motif:HMM:NF039279.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40331.1"
                     /translation="MTGYTQTPRVARGAFAVYFSSNADGTEDSSQSPTIVSFQYNPET
                     IRRTVALKGPDDKGGKGAKIAGRRIQGFPDETITLAIELDATDAIAAADATALEYGLG
                     PVLATLELLAHPPRTWEQDVRKQADAGKVAVKPSSAPLTLLVWGEARVAPVLLTNLAI
                     TEEAFDPKLNPILAKAEVTLRVLTTLELADSMLGVRAYGAYADKKWNLADKLKSADAA
                     ARSGAQKATSGG"
     gene            2213..2494
                     /locus_tag="VLJ38_12220"
     CDS             2213..2494
                     /locus_tag="VLJ38_12220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM domain-containing protein"
                     /protein_id="HSU40332.1"
                     /translation="MFFKGSRYENVGTASIVDERGRTLRYKLMRVIDDVTPEAEHVVR
                     QGVRVDQVAALRLGDPERFWRLCDLNRVAWPPELVAEVGRRLLVPSEDG"
     gene            2498..3619
                     /locus_tag="VLJ38_12225"
     CDS             2498..3619
                     /locus_tag="VLJ38_12225"
                     /inference="COORDINATES: protein motif:HMM:NF017739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
                     /protein_id="HSU40333.1"
                     /translation="MVPWSYRLKVDGAPASAGVLAAIQEIEVEESLELADILRLHLAI
                     DRNAAGSSWTVVDDDTFRRLRKLELAVTIGSKTEPLIEAYVIDVAIEIAPTPGNSALT
                     VVAMDASVLMDLEEKQRAWPDMSDASIARAVFGDYGFALAVDETQPTRQAVDHTSVQR
                     GTDIQFLRQLALRNGYECFVEIDPGTQRTTGHFHAPRLDGAAQPTLSVHLGTETNVAA
                     FKARYDMLRPTSVKAAGLDVETGEPQSASSDKSEQKSMGTTSTDARDKPRSVLLSNTG
                     LSDAGELATLTQAIVDRSAWAVDAEGELDGEIYGALLRAKRTVLVRGAGTQFSGTYYV
                     TKVHHHFAGGRYVQRFGLRRTATGVPRSQRFDEQKGLPS"
     gene            3616..4140
                     /locus_tag="VLJ38_12230"
     CDS             3616..4140
                     /locus_tag="VLJ38_12230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HSU40334.1"
                     /translation="MNASEETAALVRDQVERHFGRYRGVVTSNADPKKLGRIRAKVPE
                     VLGELESGWALPAAPAAGKNAGFFAVPAKGDLVWMEFEAGDTSRPTWVGAFWSDQQVP
                     NGVEPSVRVWKTPAGHTISLDDSAGGEKLTISDAHGASIVLDQSGVEITKGSQKLKLT
                     ATSVSINDGALEVT"
BASE COUNT          655 a         1451 c         1450 g          592 t
ORIGIN      
        1 gtccgcgtgc gcttccggct gccgacgggc aaagctcagg aagccgcggc ggagctcgcc
       61 cgccgcgagc ccgcggcagc gctcgccggc ctcgtcgccg cgtgcgtggt cgaaatacag
      121 gacgagcacg gcgagcggct cgacgccctg ccgccgtctc tcgtcgcccc gctgggcgcc
      181 gtgctggaag cgctcgatcc ccaggccgaa acgcgggtgt ccatgacgtg cgtcacttgt
      241 ggcgctccgt tcgaagcgct gctcgacgcg gcgacgctgc tgttcgccga gctcgggccc
      301 ggacgcattt tccgcgacgt gcacgtgctc gcgagccgct atcactggag cgaagcggcg
      361 attttgcggt tgagctcgga acgacgccgg cactacctcg cgctcatcgg cgaggaggcc
      421 tcgtgagctt cttcgccaac ctattgcgcc gcggcatcgg cgaggtaccg aatctcgggg
      481 gcagagcgct gccgttggtg tcgcccgtgc gtgaagagga gcgcttcatc gcggcgcctg
      541 cgtcgcaggc tgtttcgcag aacgcgccgg ccggcgacct cgtgtcacgc aaggcgtccg
      601 cgcccttcgt tgcgcccgcg cccgtcgttg cgtttcccgc gcgcgtcgca gcgccgcctg
      661 cgccgggcga cgtcccaccg ccgcgtgcgg tcattgcaga agagagcgtg gctcgggaaa
      721 gcgtcgcgcc gatcgctcgc cccgtcatgc ccgcgaatct ccaggcagcg gcccccgcaa
      781 aaccggctca gtcgttgctc tcaccgccgc cgttctcgcc gctcgccggg gccacggagg
      841 cttcggagct cactgatgct ccggcgagcc aaggcgtgcc cctggtcgtc gcgacgccgc
      901 tccggacgct cgtggtgcgt gaaaccatgc gtgagctcgt ggaacgctcc gtccccgcgg
      961 tcgcgaccga gccggcggtg agtccggccg gcggcgctgc gccgctgaag cgcgggccac
     1021 gcgaagcgcc gtcgccgctc gccacgccgc cctcggccgc agcgcgcgac ctgcgttcgg
     1081 ctacgcgcgc cgcgttgcgg cccgaagccg aagccacgcc acgctacgaa ccggcgccgc
     1141 cgctcgtcgc gccggccgcg caggcggagg tgcgcatcga gcgcatcgag atcctcgccg
     1201 agtccacgcc cgcgccgtcc gtcgagcccg cgcccgcgcc gcgcggcttc gacgcgtacc
     1261 tgttcgcgcg gagctacgtg cggagggccc gctgatgcgc gtcgtgatcg agcgcttggt
     1321 gttgcgcgga gcggtcgagg cccagcgtgt gccgtggctg cgcgcgcggc tcgagcgcga
     1381 gctcggtcga gcgctcagcg gcctcggtgc ggaggtcgcc gccgctagcg tgcccgtgcc
     1441 gccgctcgat catccgggtt ttcccgccgc ggtcgccgcg cgcgtgcggg gagccgtcgc
     1501 acgcgcgagg aggggcgcgt gaccggttac acgcaaacac cgcgcgtcgc tcgcggggcc
     1561 ttcgccgtgt acttctcgag caatgcggac gggacggagg actcgagtca gtctccgacg
     1621 atcgtctcgt tccaatacaa ccccgagacg atccggcgca ccgtcgcgct caaaggtccc
     1681 gacgacaagg gcggcaaggg cgcaaagatc gccggccgcc ggatccaggg ctttccggac
     1741 gaaaccatca cgctcgccat cgagctcgac gcgacggacg cgatcgccgc agccgacgcc
     1801 acggcgctcg agtacgggct cggccccgtg ctcgctacgc tcgagctcct cgcgcacccg
     1861 ccgcgcacgt gggaacagga cgtgagaaag caggcggacg ccggcaaggt cgccgtcaag
     1921 ccctcttcgg cgccgctcac gctgctcgtg tggggcgaag cgcgggtggc gccggtgttg
     1981 ctcaccaacc tcgcgatcac cgaggaggcg ttcgatccga agctcaaccc catcctcgcc
     2041 aaagccgagg tcacgctgcg cgttctgacg acgctcgagc tcgcggactc gatgctcggc
     2101 gtgagagcct acggcgccta cgccgacaag aagtggaacc tcgccgacaa gctgaagtcg
     2161 gcggacgccg cggcacgttc cggggctcag aaagccacga gcggagggta gggtgttctt
     2221 caagggcagc cgttacgaaa acgtgggcac ggcgagcatc gtggacgagc gcggccgcac
     2281 gctgcgctac aagctcatgc gcgtgatcga cgacgtgacg ccggaggccg agcacgtcgt
     2341 gcgccaaggg gtgcgcgtcg atcaggtggc ggcgctcagg ctcggcgatc ccgaacggtt
     2401 ttggcggctg tgcgacctga atcgggtcgc ctggccgccg gagctggtgg ccgaggtcgg
     2461 tcggcggctg ctcgttccga gcgaggacgg ctgacgcatg gtgccctgga gctaccgctt
     2521 gaaggtcgac ggcgcccccg cgagcgcggg agtgctggcc gccattcagg aaatcgaggt
     2581 cgaagagtcg ctcgagcttg ccgacattct gcggctccat ttggcgatcg atcgcaatgc
     2641 cgccggcagc agctggacgg tcgtggacga cgacacgttc cggcgcttgc gcaagctcga
     2701 gctcgccgtg acgatcggca gcaaaacgga gccgctgatc gaggcctacg tcatcgacgt
     2761 cgcgatcgag atcgcgccga cgcccggcaa ctccgcgctc accgtcgtcg ccatggacgc
     2821 gagcgtgctc atggatctgg aagagaagca gcgagcgtgg cccgacatga gcgacgcgag
     2881 catcgcgcgc gccgttttcg gcgactatgg cttcgcactc gccgtggacg agacgcagcc
     2941 gacccgtcaa gcggtcgatc acacgagcgt ccagcgcggc accgacattc aattcttgcg
     3001 ccagctggcg ctgcgcaacg gctacgaatg cttcgtcgag atagatcccg ggacgcagcg
     3061 aacgaccggt cattttcacg cgccacgcct cgacggcgcc gcgcagccga cgctctcggt
     3121 ccatctcggc acggagacca acgtggcggc gttcaaagcc cgctacgaca tgctgcgccc
     3181 gacgagcgtg aaggcggcgg ggctcgacgt cgaaaccggc gaaccgcagt cggcttcgag
     3241 cgacaagagc gagcagaaga gcatgggcac gacctcgacg gacgcgcgcg acaagccgcg
     3301 cagcgtgctg ctcagcaata ccgggctcag cgacgcaggg gagctcgcga cgttgacgca
     3361 agccatcgtc gaccgctccg cctgggccgt cgatgccgag ggcgagctcg acggtgaaat
     3421 ctacggggct ctcctcaggg ccaagcgaac ggtactcgtg cgcggcgcgg gtacccaatt
     3481 cagcggcacc tactacgtga ccaaggtgca ccaccatttc gcgggcggtc gctacgttca
     3541 acgcttcggc ttgcggcgca cggccacggg cgttccccgc tcgcagcgct tcgacgagca
     3601 gaaggggctg ccgtcttgaa cgcgtcggaa gagaccgcag cgctcgtccg cgatcaggtc
     3661 gagcgccatt tcggacgtta ccgcggcgtc gtgaccagca acgccgatcc caaaaagctc
     3721 ggccgcatcc gcgccaaggt gcccgaggtc ctgggcgagc tcgagagcgg ctgggcgctg
     3781 cccgcggcgc ctgccgccgg taagaacgcc ggcttcttcg ccgtccccgc caaaggcgat
     3841 ctcgtgtgga tggagttcga ggccggggat acgtcgcgcc cgacctgggt gggggcgttc
     3901 tggagcgacc aacaggtgcc gaacggcgtc gaaccgagcg tgcgcgtgtg gaagacgccc
     3961 gccggccaca cgatctcgct cgacgacagc gccggaggcg aaaagctcac gatcagcgac
     4021 gcccacggcg cgagtatcgt gctcgatcag agcggcgtcg aaatcacgaa aggcagccag
     4081 aagctcaagc tcaccgcgac ttcggtcagc atcaacgacg gcgcgctcga ggtgacgtga
     4141 tgggcgcg
//
LOCUS       DATIML010000708         5529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5633591, whole genome shotgun sequence.
ACCESSION   DATIML010000708 DATIML010000000
VERSION     DATIML010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5529
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5633591"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1883)
                     /locus_tag="VLJ38_12235"
     CDS             complement(<1..1883)
                     /locus_tag="VLJ38_12235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40335.1"
                     /translation="MKDHRRSGLARQAGRAIACALTMALWLVTRVAFAAPQARILRVD
                     PRAAQQNGNPVLTTVIEVSQTKRVSDATAACASLTGNGQLDCMSQALEQPFALYTPFP
                     FPAANAIFTVTIDGDEFPAKYVDHATWGDSQQQPGVGTAWLVLIDADRRMGGSFNDAR
                     QVAQQLVASLGPNDIIDLMFFNDRQVVKDSKWLAGAQKAGAAFINANAETYAASGRNR
                     SLLTIIKNAATDGFGSLGNVGENVKVPLHQAMVVLSSGFGGTDPATTGPGALQLQQYL
                     TGGRFPEDNTALPKSPVPIISVYFPLKTLDEFRQNSFEFMQNLANPEIGGFFTVVQEG
                     GGARAPAIVGTVRQRFSKMSIVHWKVACVAPSITQTFKLFFNNMSTPLLGDNTFKDVP
                     VGIDPTTWPLDVNTQYSAQIAQTHPVYPNGNFRIYGDFCWGGDKSRAEIYFLPSGQPL
                     PTALVGADIDQAKRTQQQLIAMGMKGTAVEAADTYVEVQAPDKDKILWGTGDQAVVRL
                     VVYDNRAHRTSGLTADTIVSLKGTSPPLNLMLILGAAFGVVVLALLALVIVKSGGSKK
                     RGSAPAPMAPAYGAPGGYGAPPAAPHPEFMYGAPGQAAGLGVAVPPAQAAPPSPYGGV
                     GATT"
     gene            complement(1892..2479)
                     /locus_tag="VLJ38_12240"
     CDS             complement(1892..2479)
                     /locus_tag="VLJ38_12240"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU40336.1"
                     /translation="MGSPEGLNPFGATVGPPNAPSGGAPQQSWTGEAGFGASVPPAAE
                     EPRPAAPAYAQPAPQPQPVAAPAPAARPSAHPAAADPELVDPHAPRALAGFLVSYEGN
                     ELGVFFPIFQGQNLVGRKGAAQGLQIELEHGTTSSRHATIFASARPGRMKLEDMGSTN
                     GTFVGDLMLERGKKHELKDGDVVRFGGYVTIIKIV"
     gene            complement(3006..3365)
                     /gene="rplS"
                     /locus_tag="VLJ38_12245"
     CDS             complement(3006..3365)
                     /gene="rplS"
                     /locus_tag="VLJ38_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HSU40337.1"
                     /translation="MTATLSKIHALESAGIRKDLPDFRVGDTIAVHYKIVEGDKLRVQ
                     IFRGVVIKRHRAGLRSTITVRKVSFNVGVERIFMLHSPRLEQIDVVSRGVVRKGRLFY
                     LRDLAGKAARVQDEKDR"
     gene            3552..5204
                     /locus_tag="VLJ38_12250"
     CDS             3552..5204
                     /locus_tag="VLJ38_12250"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU40338.1"
                     /translation="MAFERLLEPLRAARILHHGGGLLVVDKPPGIPVHGGDEALGGDL
                     VTRLGAWLSARGESDYVGVHQRLDEGTSGVLVFTTSREKNSELARASSEHALERRYLA
                     AVTLRSRSFAERLKHGRVRLEHRLETAAGRTRVAPSGGVSASSHVSLVERHGERALVA
                     LEPETGRTHQLRVQLAHEGAPVGGDVLYGGDPAPRLLLHACELAFGGERFRAPEPHGF
                     SAWVRGEPPVLPEPATLAALLEDAALLRAPLAKFTDTYRLVNELGDGLPAVTVDRYGD
                     YAVLQVASPEAEARTAELAALLVELGARGVYLKRRVRGDVRRAGPERTPPLPIAGEPA
                     PEHLLVDEYGLRLHVALGDGLSTGLFVDQRDNRRRVRELARGKSVLNLFCYTASFSVA
                     AALGGARRVVSVDQARRPLAIARDNFRDNGLATEAHAFLQADALDWLARAGRGKERFD
                     LIVLDPPSFASSAGGAPFSVAKGYGLLAERALALLAPGGHLFAVTNHRGTSLGRLRRT
                     LREAAARAGVNVARLKDLAPGLDCPAGPDGPAPSKSVLLTRA"
     gene            5201..>5529
                     /locus_tag="VLJ38_12255"
     CDS             5201..>5529
                     /locus_tag="VLJ38_12255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSU40339.1"
                     /translation="MKQNPYARPDARTRAAKAQGYPARSVFKLEEIDRRVKLFTPGQR
                     VLDLGAAPGSWSLYAAERVGERGAVRQLLLGPGDERVAAALEVALQIGGRAALDEHRL
                     GARADVQ"
BASE COUNT          791 a         1843 c         1999 g          896 t
ORIGIN      
        1 gtcgtggcgc cgacgcctcc gtacgggctc ggcggggctg cttgggcagg tggaacggcg
       61 acaccgagtc ccgccgcttg tcccggcgcg ccgtacatga actcgggatg cggagccgcg
      121 ggcggggcgc cgtaaccgcc gggcgcgccg tacgcgggag ccatcggggc gggcgcactg
      181 ccgcgcttct tgctgcctcc gctcttcacg atcacgagcg ctagtaacgc gagcacgacg
      241 acgccgaagg cggcgcccag aatcaacatc aggttcagcg gcggcgacgt gcccttgagc
      301 gacacgatcg tgtcggccgt gagcccgctc gtgcggtgcg cccgattgtc gtaaacgacg
      361 aggcgcacga ccgcctggtc ccccgtgccc cagaggatct tgtctttgtc gggggcctgg
      421 acttcgacgt acgtgtccgc cgcctcgacg gcggtgcctt tcatgcccat cgcgatgagc
      481 tgctgttgtg tgcgcttcgc ctggtcgatg tccgcaccga cgagcgccgt cggcagcggc
      541 tgccccgaag gtaggaagta gatttcggcg cggctcttgt cgccgcccca gcagaagtcg
      601 ccgtaaatcc ggaagttgcc gttcgggtac acggggtgcg tctgcgcgat ctgcgccgag
      661 tactgcgtgt tcacgtcgag cggccacgtc gtcggatcga tgccgaccgg cacgtccttg
      721 aacgtgttgt cgccgagcag cggcgtgctc atgttgttga agaagagctt gaacgtctgc
      781 gtgatgctcg gagcgacgca cgcgaccttc cagtgcacga tgctcatctt ggagaagcgc
      841 tggcgcaccg tgccgacgat cgccggcgcg cgcgcgccgc cgccctcctg caccaccgtg
      901 aaaaaaccgc cgatctcggg gttcgcgaga ttttgcatga actcgaacga gttctggcgg
      961 aactcgtcga gcgtcttcag cggaaagtac acgctgatga tggggacggg cgacttcggt
     1021 agcgcggtgt tgtcctcggg gaagcgcccg cccgtgaggt actgctggag ctgcagcgcg
     1081 cccggacccg tggtcgccgg atcggtgccg ccgaagccgc tcgagagcac gaccatcgcc
     1141 tggtgcagcg gcaccttcac gttttcgccg acgttgccga gcgagccgaa gccgtcggtc
     1201 gccgcgttct tgatgatggt gaggagtgag cgattacggc cgctcgcggc gtacgtttcg
     1261 gcgttcgcgt tgatgaacgc ggcgcccgct ttctgcgccc ctgcgagcca cttcgaatct
     1321 ttgacgacct gacggtcgtt gaagaacatg aggtcgatga tgtcgttcgg gccgaggctc
     1381 gcgacgagct gctgcgccac ttggcgcgcg tcgttgaagc tgccgcccat gcggcggtcg
     1441 gcgtcgatga gcacgagcca cgccgtaccg acgccgggtt gctgctggct gtccccccac
     1501 gtcgcatggt ccacgtattt ggccgggaac tcgtcgccgt cgatcgtcac cgtgaagatg
     1561 gcgttcgccg cggggaaggg aaagggcgtg taaagcgcga acggctgctc gagagcctgg
     1621 ctcatgcagt cgagctggcc gttgccggtg agagacgcgc aggccgccgt cgcgtcgctg
     1681 acgcgcttgg tctgcgagac ctcgatcacc gtcgtgagta cgggattacc gttttgctgc
     1741 gctgcgcgag gatcgacacg cagaatgcgt gcctgcggcg ccgcgaacgc gacgcgggtc
     1801 acgagccaaa gcgccatggt gagcgcgcac gcgatggcgc ggccggcctg ccgcgcgagc
     1861 cccgatcgac gatgatcctt catatacgcc ctcaaacgat tttgatgatc gtcacgtagc
     1921 caccgaaacg gacgacgtcg ccgtccttga gctcgtgctt cttgccgcgc tcgagcatga
     1981 ggtcgccgac gaaggtgccg ttcgtgctgc ccatgtcctc gagcttcatg cggcccgggc
     2041 gcgcgctcgc gaagatcgtc gcgtggcgcg acgaagtggt gccgtgctcg agctcgatct
     2101 ggagcccctg agcggcgccc ttcctgccca ccaggttttg tccctgaaag atcggaaaga
     2161 acacgccgag ctcgttgccc tcgtagctca cgagaaagcc ggcgagcgcg cggggcgcgt
     2221 gtgggtcgac taactcggga tcggccgcgg ccggatgcgc ggacggacgg gccgcgggag
     2281 ccggggcggc gacgggttgc ggttgcggcg cgggttgcgc gtaggcgggc gccgcgggac
     2341 ggggctcctc ggcggccgga gggacgctgg cgccgaatcc ggcttcaccc gtccaggatt
     2401 gctggggcgc tccgccgctc ggtgcgttgg gagggccgac cgtggctccg aagggattca
     2461 acccttcggg cgagcccacg cggtgcgccg gcgcaggacc gaaaccgccc gcgggcgcga
     2521 agcccgggcc ttgattccat ccagcggggg gctgctgcgc aggtggaggg ggcgcacccc
     2581 aagcggctgg agccggagga ttggcaggct gctggcccca gccaccctgt ggtgcgggcg
     2641 gtgcgggcgg tggttggccc caagcctgct gtgcgggagc cggcggcgct tgaccccagc
     2701 cctgctgagc cggttgttgc ccccaaccgg ctgcgggcgg ctcggctgca ggcggtcccc
     2761 attgaggcgg gggagccggc ggcggcggcg cagcccatgg ctggggtgca ggtgcgggag
     2821 gagggttgtt ggcgggggca ggtgccgcag ggggctgctg ccccggctgt tgaacgggag
     2881 ctccgcacga taagcagaac ttgttcgtcg gctggttctg ggcgccacag cgagcgcaga
     2941 cgatcatgcg aggactccgg gggcgcgagc atagccgctc gcgctcgcca gcggaacacc
     3001 gcgattcagc ggtccttctc gtcctgaacg cgagcggctt taccggctag gtcgcgcagg
     3061 taaaagaggc gacctttgcg caccacgccg cgggaaacga cgtcgatctg ctcgaggcgc
     3121 ggggagtgca gcatgaaaat gcgctcgacc ccgacgttga agcttacttt gcgcaccgtg
     3181 atggtggagc gcagccctgc ccggtggcgc ttgatgacga cgccgcggaa gatctgcacg
     3241 cggagcttgt caccttcgac gatcttgtag tggacggcga tggtgtcgcc gacccggaag
     3301 tccgggagat ccttgcggat tccggctgat tccagggcat gaattttgga cagcgtcgcg
     3361 gtcatgacaa aagctcgttt tccggcgggt gggggaggag gggcggcgat tatgcactcc
     3421 gagccgatcg cgtcaagccg cgcgggcctg gacgagcaag tctcggtgaa ttgcgcattt
     3481 ctgctctcgg ttccagaagc ggcggcacgc gaggcaggcc gacgaagcgt cacgcgttat
     3541 cttgccgcga cttggcgttc gaacgcttgc tcgagccgct gcgcgctgcg cgcattttac
     3601 atcatggcgg cggcttgctc gtcgtcgaca agcccccggg catcccggtg cacgggggcg
     3661 acgaggcgct cggcggcgat ctcgtgacgc gcctcggcgc ctggctcagc gcgcgcggcg
     3721 agagcgacta cgtcggggtg caccagcggc tcgatgaggg cacctcgggc gtcctcgtct
     3781 tcacgaccag ccgcgagaaa aattcggagc tcgcgcgcgc gtcgagtgag cacgcgctcg
     3841 aacgccgtta tctcgcggca gtgacgctcc gctcgcgatc cttcgccgaa cgcttgaagc
     3901 acggccgcgt gcgcctcgag caccggctcg aaacggcggc cggtcgcacg cgcgtcgccc
     3961 cgtccggcgg cgtgtccgcg agctcgcacg tgtcgctcgt cgaacgccac ggagaacgcg
     4021 cgctcgtcgc gctcgagccc gagacggggc gcacgcacca actccgggtt caactcgcgc
     4081 acgagggggc gcccgtgggc ggcgacgtgc tgtacggcgg cgatccggcg ccgcgtctgt
     4141 tgctccacgc gtgcgagctc gcgttcggcg gcgagcggtt tcgggcgccg gagccgcacg
     4201 gtttttcagc gtgggtgcgg ggtgaacccc cggtgctccc cgagccggcg acgctcgcgg
     4261 cgctgctcga agacgcggcg cttttgcgcg cgccgctcgc gaagttcacc gacacgtatc
     4321 ggctcgtcaa cgagctcggt gacggcttgc cggccgtcac ggtcgatcgc tacggcgatt
     4381 acgcggtgct ccaggtcgcc tcgcccgaag cggaagcgcg cacggccgag ctcgcggcgc
     4441 tgctcgtcga gctcggcgcg cgcggcgtct acttgaagcg gcgtgtgcgc ggcgacgtgc
     4501 ggcgcgccgg cccggagcgc acgcccccgc tgcccatcgc gggcgagccc gcacccgagc
     4561 acttgctggt cgatgagtac ggcttgcgcc tgcacgtcgc gctcggcgac ggcctctcga
     4621 cggggctctt cgtggatcag cgtgacaatc gccggcgcgt gcgcgagctc gcccgcggca
     4681 agagcgtgct caatctcttc tgttacacgg caagcttctc ggtcgcggcg gcgctcggcg
     4741 gcgcgcggcg cgtcgtgagc gtcgatcaag cgcgccggcc gctcgcgatc gcacgcgaca
     4801 actttcgcga caatgggcta gccaccgaag cgcacgcctt cttgcaagcc gacgcgctcg
     4861 actggctggc acgggcaggc cgcggcaagg agcgcttcga cctcatcgtg ctcgatccgc
     4921 cgagctttgc gagctcggcc ggcggcgcgc cgttcagcgt cgcgaagggc tatggcctgc
     4981 tcgccgaacg cgcactcgcg ctgctggcgc ccggtgggca tctctttgcc gtcaccaatc
     5041 accgcggcac ctcgctcggc cgtctgcgcc gcacgctgcg cgaagcggcg gcgcgcgccg
     5101 gcgtgaacgt cgcaaggctc aaggatctcg cgccgggact cgactgcccc gccgggcccg
     5161 acggtcccgc gcccagcaag agcgtgctac tcacccgagc gtgaaacaga acccctacgc
     5221 gcgtcccgac gcccgcacgc gtgcggccaa ggcgcagggt tatccagcgc gtagcgtgtt
     5281 caagctcgag gagatcgatc ggcgcgtcaa gctcttcacg ccggggcaac gcgtgctcga
     5341 tctgggcgcg gccccgggct cgtggtcgct ctacgccgcg gagcgcgtcg gcgagcgcgg
     5401 cgcggtgcgc cagctcctgc tcggcccagg cgacgaacgc gtcgcagcag ctctcgaagt
     5461 ggcgctgcag atcggcggcc gtgcagcgct cgacgaacac cgtctcggcg cccgtgccga
     5521 cgtccagat
//
LOCUS       DATIML010000709         2979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3612086, whole genome shotgun sequence.
ACCESSION   DATIML010000709 DATIML010000000
VERSION     DATIML010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3612086"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="VLJ38_12260"
     CDS             complement(<1..845)
                     /locus_tag="VLJ38_12260"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde reductase"
                     /protein_id="HSU40340.1"
                     /translation="MSNDDQLVLVTGANGFVATHCIVELLRSGYRVRGTLRSSAQAAK
                     VRNAVGTEANATRLSFAEADLNLDDGWTRATEGCTYVLHVASPVPRQVPKNADDVILP
                     ARDGTLRVLKAATSSGVKRVVLTSSTAAVFYGRKRDGSEVYSEKDWSILSEEVSAYDR
                     SKTLAERAAWDYVRSLGPSQRLELAVLNPGLVLGPLLMDNASISGEVVGKLLKRELPG
                     CPDLGFAPVDVRDLAAMEVKAMTHPAAAGERFILALEHASMLEIAQILARHFGPQGIN
                     VPTRRV"
     gene            complement(957..2576)
                     /locus_tag="VLJ38_12265"
     CDS             complement(957..2576)
                     /locus_tag="VLJ38_12265"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSU40341.1"
                     /translation="MLSRSAYLLLLAVGTQKSACSHGWELAGYDETASAFNANERRLG
                     PNNVARLKVDWVFDETAAGQPVRPIHATPVIDADGNAYVGDLGGRFYSVSPSGTLRWT
                     FAADAPTPELGALVAPELGAPDGAPFLGGAALATERPYVVAGDANGRIYARRLDTGDE
                     VWTARGLDANPLGGVSGNSVAVYGDTVLVGMSSLENYAFVLSSAGLRVDCCSHQGELV
                     ALDLATGAERWRYVTSPPAAPLPPAAAPFVLGPAGGDIWSQPTLDVDTHTVYVSTGQN
                     LSPTADGHSTPTSDAIIALDGSNGAVEWVHQFTPNDIWAVGVPNPNPVTGQLLDMDLG
                     DAPKIYRLPNGRKVVAAGQKDGRYHVLDAATGDLVKTTQVLAARNDLGGFQTGGAFAY
                     GMAFEHGLNATAGFDTCEDGSCPYEGFDGTVVALSADGARRIWSVNVPVSPLLGGIAV
                     ANRVVYFQSPVEEANPQTDAPRWGLYAIDALSGAVLERMTFAGRAIASPVVSDGHVYV
                     TSGNGALPAYGIMPKGGLVRLGLPAGADGRD"
     gene            complement(2614..>2979)
                     /locus_tag="VLJ38_12270"
     CDS             complement(2614..>2979)
                     /locus_tag="VLJ38_12270"
                     /inference="COORDINATES: protein motif:HMM:NF024911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU40342.1"
                     /translation="KRHAKKAYDEFIHLPVEFPLVKDGHRPVSEKFRKLSDGLLLETL
                     RELGIKYHIVSGSLEERLGRIAEIYRLEPVMPLDQAVREASARVRALHRAIETDAQAA
                     ALRRQSLPWRARVRQKLAS"
BASE COUNT          472 a          962 c         1033 g          512 t
ORIGIN      
        1 acgcggcggg tcggtacgtt gatgccctgc ggcccgaaat ggcgcgccaa gatctgggcg
       61 atttccaaca tcgaagcgtg ctcgagcgcg agaatgaagc gttcgcctgc ggcagcagga
      121 tgcgtcatgg ctttcacttc catcgccgcg aggtcccgga cgtctaccgg cgcaaagccg
      181 agatcggggc agcccggaag ctctcgtttg agcagcttgc ccacgacttc tccggaaatg
      241 ctcgcgttgt ccatgagcag cggcccgagt acgagtccag ggttgagcac ggccagctcg
      301 agccgttgcg agggacccag actgcgcacg tagtcccacg cggcgcgctc ggcgagcgtc
      361 ttgctccgat cgtaggcgct cacttcctcc gagaggatcg accaatcctt ctcgctgtac
      421 acttccgagc cgtcgcgctt gcgcccgtag aacacggcgg cggtcgagga cgtcaagacc
      481 acgcgcttga cgcctgagct cgtggcggct ttcagcaccc gcagcgtgcc gtcgcgcgcc
      541 ggcaagatca cgtcgtccgc gtttttcggc acttggcgcg gcacgggcga ggcgacgtgg
      601 agcacgtacg tgcagccttc ggtcgcgcgc gtccagccgt cgtcgaggtt caggtccgcc
      661 tcggcgaacg agagtcgcgt cgcgttcgct tccgtaccta cggcgttgcg aaccttagcg
      721 gcttgcgccg aggaacgcag cgtgccgcgc acgcgatagc cgctgcgcaa gagctccacg
      781 atgcagtgcg tcgccacgaa tccgttcgcg cccgtcacga ggacgagttg gtcgtcattt
      841 gacatgtcgc ttgccaccct tggttgtgtg tccgccctga gcacgagcat agacgagcga
      901 ttcgcgctcg gcaactcgtc ttcggtcgcg tgcgcaggac gtcggcgcgg ctttcatcaa
      961 tcacgtccat ccgcgcccgc gggcaagccg agtcgaacga ggccgccttt gggcatgatc
     1021 ccgtaagcgg gtagcgcgcc gttgccgctc gtcacgtaca cgtgtccgtc gctgacgacg
     1081 gggcttgcga tggcgcggcc cgcgaacgtc atgcgctcga ggacggcgcc gctcagcgcg
     1141 tcgatggcgt agagacccca gcgtggcgcg tcggtttgcg ggttcgcctc ctcgacgggc
     1201 gactgaaaat aaacgacgcg gtttgcgacg gcgatgccgc cgagcagcgg cgaaacgggg
     1261 acgttgacgc tccagatccg ccgcgcgccg tcggcggaga gggccacgac cgtgccgtcg
     1321 aagccttcgt acgggcagct gccgtcctcg caagtgtcga agcccgccgt cgcattcaga
     1381 ccgtgctcga aggccatgcc atatgcaaag gcgccgccag tctggaaccc gccgagatcg
     1441 ttgcgggcgg cgagcacttg agtggttttg acgaggtcgc ccgtcgcggc gtcgagcacg
     1501 tggtagcgcc cgtctttttg accggcagcc acgactttgc ggccgttcgg caggcggtaa
     1561 atcttcggcg cgtcgccgag gtccatgtcg agcagctggc ccgtgaccgg gttcgggttc
     1621 ggtacgccta ccgcccagat gtcgttcggc gtgaattggt gcacccattc gaccgcgccg
     1681 ttcgacccgt cgagcgcgat gatggcgtcg ctcgtcggcg tggagtggcc gtctgcagtc
     1741 ggcgacaggt tctgtcccgt gctcacgtag acggtgtgcg tgtcgacatc gagtgtcggt
     1801 tgcgaccaga tgtcgccacc ggcgggaccg agcacgaacg gagcggcggc gggcggaagt
     1861 ggcgccgcag gcggcgaggt cacgtaacgc cagcgctcgg cgcccgtcgc gagatcgagg
     1921 gcgacgagct cgccctgatg cgagcaacaa tcgacgcgca gccctgcgga cgagagcacg
     1981 aaggcgtagt tttcgagcga cgacatgccc acgagcacgg tgtctccgta cacggcgacg
     2041 gagttgcctg agaccccgcc gagcggattc gcgtcgaggc cgcgcgccgt ccaaacctcg
     2101 tccccggtgt cgagccggcg tgcgtagatg cgtccgttgg cgtcgccggc cacgacgtac
     2161 gggcgctccg tcgcgagcgc ggcgccgccg aggaagggcg ctccgtcggg cgcgccgagt
     2221 tcgggcgcaa cgagcgcgcc aagctcgggt gtgggcgcat ccgccgcgaa ggtccaacgt
     2281 agcgtgccgc tcggcgagac cgagtaaaag cggccaccta gatcgccgac gtaagcattg
     2341 ccgtctgcgt cgatgacggg cgtcgcgtgg ataggacgca ccggctgtcc ggcggcggtc
     2401 tcgtcgaaga cccaatcgac cttgagtcgc gcgacgttgt tcgggccgag ccgccgctcg
     2461 ttcgcgttga aagcgctggc ggtctcgtcg tagcccgcga gttcccagcc gtggctgcac
     2521 gcgctcttct gcgtaccaac ggcgagcagc aacaaataag ccgaacggga caacatgcgt
     2581 tcaattcctt ttggttcgga aagggagagc ccttcaagaa gcgagctttt gccggacccg
     2641 ggcgcgccag ggcagggatt gacggcgcag cgccgcagcc tgcgcatcgg tctcgatcgc
     2701 gcggtgcagc gcgcgaacgc gggcgctcgc ttcgcgcacg gcttggtcga gcggcatcac
     2761 cggctcgagc cggtagatct ccgcgatgcg tccgaggcgc tcttcgaggc tgcccgacac
     2821 gatgtggtac ttgatgccga gctcgcggag cgtctcgagc aagaggccgt cggacagttt
     2881 gcgaaatttt tccgacaccg gccggtggcc gtctttgacg agcgggaatt cgacggggag
     2941 gtggatgaac tcgtcgtagg ctttttttgc gtgccgttt
//
LOCUS       DATIML010000710         2073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1882247, whole genome shotgun sequence.
ACCESSION   DATIML010000710 DATIML010000000
VERSION     DATIML010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1882247"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VLJ38_12275"
     CDS             <1..432
                     /locus_tag="VLJ38_12275"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU40343.1"
                     /translation="IDVAVTWEPWITKVAGEKKGHVIFSSKETPNLILDVLAVGTKAA
                     AKRSAETRAFLKAMNRGYEFVQAHPDEAAALGAKALEQKPEEVKAMLTKVELYSPAKN
                     LTVMAGPAAEASKQVAKFFKDHGVNDTLVDTNTLYDASYLK"
     gene            429..1115
                     /locus_tag="VLJ38_12280"
     CDS             429..1115
                     /locus_tag="VLJ38_12280"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HSU40344.1"
                     /translation="MTSAIAAAEPAGVSRMALLMIDFQRDFCAEGGYSDRFAGLEWVK
                     PILAPARRLLDAARKSGLLVVHTREGYAADLSDCSPAKLLRSRKAGSEIGSVGPMGRL
                     LIRGEHGHDIIDALKPVAGEIVIDKASYGAFCGTNCESILRSRGIDTLVFAGVTADVC
                     VHTTLREAYDRWFDCFYVKDAISCFDPEIRRACEKMIEEEGGIWGALTTVEQMTQRWS
                     ASTHSPTVCR"
     gene            complement(1208..1987)
                     /locus_tag="VLJ38_12285"
     CDS             complement(1208..1987)
                     /locus_tag="VLJ38_12285"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSU40345.1"
                     /translation="MSAEPDWSPARYANQARFVIDGGAPLLELLAARPGDRVLDLGAG
                     TGTLTRAIADTGASVIGVDASDAMLAEARRAYPELDFRAGRAEALAFEREFDAIFSNA
                     TLHWIPDAASVARGMFRALVPGGRLVAEFGGYGNVSAVLAAINHALTTLAPDSALLPF
                     SPWYFPRLGAYTHLLETHGFEVRSAWCFPRPSPMPDRDGQSGIAAWIDIFARDVVATL
                     SQDERRRFDMLVEEHARAALFREGTWCIDYVRLRVVAVVPR"
BASE COUNT          395 a          670 c          683 g          325 t
ORIGIN      
        1 atcgacgtcg ccgtgacctg ggagccctgg atcacgaagg tagcgggcga aaagaagggg
       61 cacgtgatct tcagctccaa ggagacgccg aacctgattt tggacgtgct cgccgtcggc
      121 accaaggcgg ccgccaaacg ctcggccgag acgcgcgcct ttctgaaggc catgaatcgc
      181 ggctacgaat tcgtgcaagc gcaccccgac gaggcggccg cgctcggcgc caaggcactc
      241 gagcagaagc ccgaggaagt caaagccatg ttgaccaagg tcgagctcta cagtcccgca
      301 aagaacctga cggtcatggc ggggcccgcc gccgaagcat cgaagcaagt tgccaaattc
      361 ttcaaagacc acggcgtgaa cgacacgttg gtcgacacga acacgctcta cgacgcctcg
      421 tacctgaaat gacgagcgcc atcgccgcgg cggagcctgc gggcgtgagc cgcatggcac
      481 tcctcatgat cgatttccag cgcgactttt gcgccgaagg cggctattcc gatcgtttcg
      541 cggggctcga gtgggtaaag cccattctcg cacccgcgcg ccgcctgctg gacgccgcgc
      601 gcaagagcgg gctcctcgtc gtgcacacac gggaaggcta cgccgcggat ctgtcggact
      661 gctcgcccgc caagctcctg cgcagccgca aggcgggcag cgaaatcggc agcgtgggtc
      721 ccatgggacg gcttctgatc cgcggcgagc acggccacga catcatcgat gcgctgaagc
      781 ccgtcgctgg cgaaatcgtg atcgacaagg cgagctacgg cgcgttctgc ggcacgaatt
      841 gcgagagcat cctccgctcg cgcggcatcg acacgctcgt gttcgccggc gtcaccgccg
      901 acgtctgcgt ccacacgacg ctacgcgaag cgtacgatcg ctggtttgac tgcttctacg
      961 tgaaggacgc catttcgtgc ttcgaccccg agattcgtcg cgcttgcgag aagatgattg
     1021 aagaggaagg cggcatctgg ggcgcgctca cgaccgtcga gcagatgacg caacgctgga
     1081 gcgcgtcaac gcattccccg acggtctgcc gctgacatcc gcgcacgcct cgctggaatc
     1141 cccgagtaga acagaagccg cggctccggg aacactcgct gagcgctgtc tgaatgggct
     1201 cgcgcgctta gcgcgggacg accgcaacga cgcgaagccg cacgtagtcg atgcaccagg
     1261 tgccttcacg aaacagcgcg gcgcgggcat gttcttccac gagcatgtcg aagcggcggc
     1321 gctcgtcttg gctgagcgtc gctacgacgt cgcgcgcgaa aatgtcgatc caggccgcaa
     1381 tgccgctctg gccgtcccga tccggcatgg ggctcggccg cgggaagcac caagcgctcc
     1441 gcacttcgaa gccgtgcgtc tcgagcagat gcgtgtacgc gccgagccga gggaaatacc
     1501 acggcgaaaa cgggagcaaa gcggagtcag gcgcgagcgt cgtgagcgcg tggttgatcg
     1561 cggcgagcac ggccgagacg ttgccgtaac cgccgaactc cgcgacgagg cggccgccgg
     1621 gcacgagggc gcgaaacatg ccgcgcgcga cgctcgctgc gtccggtatc caatgcagcg
     1681 tcgcgttgga aaagatcgcg tcgaattcgc gctcgaacgc cagagcttcg gcgcggcccg
     1741 cgcgaaagtc gagctcggga taggcacgcc gggcttcggc gagcatggcg tccgaggcgt
     1801 cgacgccgat gacgctcgcg ccggtgtcgg cgatcgcccg ggtcagcgtg ccggtgcccg
     1861 caccgagatc gagcacgcga tcgcctggtc gcgccgcgag caattcgagc agcggcgcgc
     1921 cgccgtcgat cacgaaacgt gcttggttcg cgtagcgcgc ggggctccag tccggttcag
     1981 cgctcatgtt gatgttccta gctttcgttc tcggggtgtt tatctctctg cgagaacatg
     2041 gcgcggcttc aaagcttaat caaactaata taa
//
LOCUS       DATIML010000711         3598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2455380, whole genome shotgun sequence.
ACCESSION   DATIML010000711 DATIML010000000
VERSION     DATIML010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3598
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2455380"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1465)
                     /locus_tag="VLJ38_12290"
     CDS             complement(<1..1465)
                     /locus_tag="VLJ38_12290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40346.1"
                     /translation="MVVPLLAVACGSSDDDSGAAGSAGQSGALSQGGSGGTGAHAGQG
                     AGGGTDASGGTGAHAGQSTGGGAGKGSPASGGNTTGGAGSLAGAAGVSDGGGGGETTL
                     SICDAPELAPSSEPDHVVGDGTAASCTESELQAAASAGGVITFDCGRDPVTITVTQTI
                     VFKKESVLDGNGLVTLSGGKSARILYLDSAYDQRTPRLTVERLTFRDGNSPAGGDDTA
                     AGGGAIYRDGGSLTVLECDFENNHAPSVGQDVAGGAIYGFGGGETVIAHSTFSGNAAS
                     DGGAVGSLNGDLTIIDSLFSDNQATGTDGNPGNGGCGGAVYMDGGDETTTLCGVVMAH
                     NSAGALAGGFFRVSNSADGTFTMDRSVVRDNSVTPDASGNAGGMYLQGLALTITASTI
                     AGNRAFYNGGLWISGREANLTNVTVAGNTAFGSNGAGLWLAHEPTGTILNSTIADNHS
                     TADGQVAGAIFGSGLALKNTIVSGNTAQYTPGCDAKHA"
     gene            complement(1623..2324)
                     /locus_tag="VLJ38_12295"
     CDS             complement(1623..2324)
                     /locus_tag="VLJ38_12295"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU40347.1"
                     /translation="MKKPVCAVVGVGPGNGAAIARRFHAQGYAVALLARSTELTSALA
                     TELDGARAYVCDVADEGSIVKAFAALSSELGAVEVLVYNAGSGVWGTIEDISSKDFEQ
                     SFRVNTLGAFVTSKQVIGPMKQAGKGSIVFIGATASRRGNVKTAAFAPAKAAQRSLAE
                     SMARYLWPAGIHVAVVILDGVVDLPRTRKMMPDKPDSFFVSPTELAESVWQLTQQKRS
                     VWSFELEARPFGESW"
     gene            2449..>3598
                     /locus_tag="VLJ38_12300"
     CDS             2449..>3598
                     /locus_tag="VLJ38_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40348.1"
                     /translation="MPLLAATAGACTGAELRDGPPDTQGDSGNGGYAGTTGAGGKGNG
                     GSSSTAATGGSSATGGSSATGGTAGSTGTTGGNANGGGANAAPSGGASGTSARGGSSG
                     ATGHAGAGASGGSAGKSGSAGKAGSAGAAGASGGGSWSAGNPNGSCSAGVPSRGKAVD
                     TTKPTTVVGTGTAASCTFSKLQSAVAQGGIITFDCGPDPVTIAVTATLTPPVNKNTVL
                     DGGRLVTLDGGNAVQILRFDSPDFQANDNGLTLQHLALTNGKQTPTDAIPYAPAPCSQ
                     GFDDGEGGAVYVRDGFLTVIDSIFTHNEAAPLGPDTGGGAIYVLGSKAGVTIVSSTFT
                     GNQASNAGAVGGLFAELDIYDSLFSNNSAIGHDANSNDPDHCSVMNNDQ"
BASE COUNT          575 a         1267 c         1198 g          558 t
ORIGIN      
        1 ttgcgtgctt cgcatcgcaa ccaggagtgt attgcgcagt gttgcccgac acgatggtgt
       61 ttttcagcgc gagaccggag ccgaaaatgg cgccggcgac ttgaccgtcc gccgtggaat
      121 ggttgtcggc gatggtcgag ttcaagatcg tgccagtggg ctcgtgagcg agccagagac
      181 cggcgccgtt actgccgaag gccgtgttgc cggcgaccgt gacgttcgtg aggttcgctt
      241 cgcggcccga gatccagagt ccgccgttgt aaaaggcgcg gttacccgcg atcgtgctcg
      301 ccgtgatcgt gagcgcgagg ccttggaggt acatgccccc cgcgttgccg gaagcgtcgg
      361 gcgtcacgct gttgtcgcgc acgacgctgc gatccatcgt gaacgtgccg tccgcagagt
      421 tcgagacgcg gaagaagccg cccgcgagcg cgccggcgct attgtgcgcc atcacgacgc
      481 cgcagagcgt cgtggtctcg tcgccgccgt ccatgtagac ggcgccgccg cagccaccgt
      541 tgccgggatt gccgtccgtg ccggtcgctt ggttgtcgct gaagagggag tcgatgatgg
      601 tcaagtcgcc gttcaggctg ccgacggcgc caccgtcact cgcggcgttg ccgctgaagg
      661 tgctgtgagc gatgacggtc tcgccgccgc cgaagccgta aatggcgccg ccggccacgt
      721 cttggccgac gctcggcgcg tgattgttct cgaagtcgca ctcgagcacg gtgaggctgc
      781 ctccgtcgcg gtagatggcg ccgccgccgg ccgccgtgtc gtcgccgcct gccgggctgt
      841 tgccgtcacg aaaggtgagg cgctcgaccg tgagccgcgg cgttcgctga tcgtaggcgg
      901 agtcgaggta gaggatacgc gcgctcttgc cgccgctcag cgtcacgaga ccgttgccgt
      961 cgagcacgct ttcctttttg aagacgatcg tctgcgtgac ggtgatggtg acggggtccc
     1021 ggccgcagtc gaacgtgatg acgccgcccg cgctcgccgc ggcttggagc tcgctctccg
     1081 tgcagctcgc cgccgttccg tcgccgacga cgtgatcggg ctcggagctt ggcgcgagtt
     1141 cgggcgcgtc acagatggaa agcgtcgtct cgccgccgcc gccgccgtcc gagacgcccg
     1201 ccgcacccgc aaggctgccg gccccgcccg tcgtattgcc gccgcttgct gggcttccct
     1261 tccccgcccc gccgcccgtg ctttgtccag catgcgcgcc ggttccgccg ctcgcgtcgg
     1321 ttccgccgcc tgcgccttgt ccagcgtgcg cgccggttcc gccggaaccg ccttggctca
     1381 gcgcaccgct ctgcccggcg ctgcccgccg ctccagaatc atcgtccgag ctgccgcaag
     1441 ccacggccag aagaggcacc accacgaccc agccataccg cagcatgagc gccttcgagc
     1501 ttacaccgct cgtcgctccg agcgttgccg ttgcggagtg tgcaacacaa tcaggtgtgc
     1561 gacgaccgac acgcacctac agcgcgcacc cgcgctagac cgctcaactc gagacgagca
     1621 attcaccaac tctcgccaaa gggccgcgct tcgagctcga acgaccagac cgagcgtttc
     1681 tgctgggtca gctgccacac cgactctgcg agctcagtcg ggctcacgaa aaagctgtcg
     1741 ggtttgtcgg gcatcatctt gcgcgttcgc ggcaaatcca cgacaccgtc gagaatgacg
     1801 acggcgacgt gaattcccgc gggccagagg tagcgcgcca tcgactcggc gaggctccgt
     1861 tgcgcggctt ttgccggcgc gaaagccgcc gtcttcacgt tgccacgccg ggaggccgtc
     1921 gcaccgatga aaacgatgct gcctttgccg gcttgtttca tcggaccgat gacttgcttc
     1981 gacgtgacga aggcgcccag cgtgttgacg cgaaacgact gctcgaagtc tttggacgaa
     2041 atgtcctcga tcgtgcccca gacgccgctg cccgcgttgt agacgagcac ctccacggcg
     2101 ccgagctcgc tcgagagcgc ggcaaaagct ttgacgatcg agccctcgtc ggcgacgtcg
     2161 cagacgtagg cacgcgcgcc gtcgagctct gtggcgagcg cgctcgtgag ctccgtcgaa
     2221 cgggcgagca gcgcgacggc gtaaccttga gcgtgaaacc gccgtgcgat ggccgcgccg
     2281 ttgccggggc ccacgcctac cactgcacat acgggctttt tcatcagcgc ctccgcggcc
     2341 cggtgtacca cgtcgccatt tttttgaccc gtgcgcccaa actcgcggtt cctatcccac
     2401 gtgctcggaa tcactcgttt ccgctcgcta cgccgcagca gagctctggt gccactcctt
     2461 gccgcgacag ccggcgcctg caccggcgcc gagctccgcg acgggccccc cgacacgcag
     2521 ggcgacagcg gcaacggcgg ctacgccggc acgacgggtg caggtggcaa agggaacggc
     2581 ggctcgtcgt ccacggccgc aaccggcggc tcgagcgcaa ccggcggctc gagcgcaacc
     2641 ggcggcactg ccggctcgac cggcacgacg ggcggtaacg ccaacggcgg gggtgccaac
     2701 gcagcgccga gcggcggcgc gagcggcacg agcgcccgtg gcggctcgag cggcgcaaca
     2761 ggacacgccg gcgccggcgc ctcaggcggc agcgccggca agagcggcag cgccggcaaa
     2821 gcgggcagcg cgggcgcggc cggagcgagt ggcggcggca gctggagcgc cggcaacccg
     2881 aacggctcgt gcagcgccgg cgtgccgtcg cgtggcaagg ctgtcgacac caccaagccg
     2941 acgacggtcg tcggcacggg cacggccgcg agctgcacgt tcagcaagct tcagagcgcc
     3001 gtggcgcaag gcggcatcat cacgttcgat tgcgggccgg atccggtcac gatcgccgtg
     3061 acggcgacgc tcacgccgcc cgtgaacaag aacaccgtgc tcgacggcgg ccggctcgtc
     3121 acgctcgacg gtggcaacgc ggtccagatc ctgcgcttcg acagcccgga ttttcaggcg
     3181 aacgacaacg gcctcacgct gcagcacctc gcgctcacga acggcaagca gacgccgacc
     3241 gacgcaattc cctacgcgcc cgcgccgtgc tcgcagggct tcgacgacgg cgaaggcggc
     3301 gccgtgtacg tgcgcgacgg ctttctcacc gtcatcgact cgatcttcac gcacaacgag
     3361 gctgcgccgc tcggccccga cacgggcggc ggcgcgattt acgtcctcgg cagcaaagcg
     3421 ggcgtcacca tcgtgagcag cacgttcacg ggcaaccaag cgagcaacgc gggcgccgtg
     3481 ggcggcttgt tcgccgagct cgacatttac gacagcctct tctcgaacaa cagcgcgatc
     3541 ggccacgacg ccaacagcaa cgatcccgac cactgctcgg tcatgaacaa cgatcaga
//
LOCUS       DATIML010000712         2559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3037286, whole genome shotgun sequence.
ACCESSION   DATIML010000712 DATIML010000000
VERSION     DATIML010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3037286"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..932)
                     /locus_tag="VLJ38_12305"
     CDS             complement(<1..932)
                     /locus_tag="VLJ38_12305"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HSU40349.1"
                     /translation="MQESVVRGTPVPVSDVPSIGRPYVVLVLFRTFDLNWRACSGTYF
                     APRVVLTAAHCVPPEYVAGAYVYWGNDFETDIGNVFDIPPPGQPSVWAKADSWHVHPD
                     YLKNYFDADMAVVYLDRKPPFDPLPLFRNRLDASWTNKLATLVGWGANLALSQDTQDN
                     EGFGIKRTGKAPILGTPTLADYEPTPQEAPLLTPTVRGHNVKLNGKKPNANLCSGDSG
                     GPLLVNQYGQDYVAGVASRTGDWCEDLSLYTRIDPYLPFLDEAYRKGGQAPLVPSLDC
                     IDTWTGKTTAYFGYQNDNGVSVSVPYGTKNYFPL"
     gene            1215..>2559
                     /locus_tag="VLJ38_12310"
     CDS             1215..>2559
                     /locus_tag="VLJ38_12310"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU40350.1"
                     /translation="MNQAVSTRASVWSWIVTRRYTLALAALVSASLAFRLHVSHACSL
                     WQDEASTAHDAYAPWPLLLHGPEREHPPLMFWMVRFATEILGRGDTGVRSVSLFFGCV
                     LLVAVYRLCLELELSAAQGLAAAASLSLTPFFMKHAIEARQYAITGALVTFSTVFALR
                     LLRGPFRLRTFVGFAVCSVAASAVQFFAFAYALSLWGAVVVGTARRWRPQTLSVRQRA
                     ALASVLGLTLLSFGAITVLVVSLAHWYEMRALGEKAQHHFSVPSIWRAFSFLARPPWP
                     ALEPFVAAFGLLFIAVRRRSLAGLIPLALTFAPIGVASLMSSGHSLGPRYLYPSFVFY
                     QLGEVAAVFGVFELLAKLAGRWGRPLAALGVVALVVPLGLRLREYPTGFGAGTANYRG
                     LQAYFEGPRGRDTALVVFVGYAGLRIMQTLYPVPHLMSLEAFEPIPGIDRYLIAEF"
BASE COUNT          376 a          867 c          801 g          515 t
ORIGIN      
        1 tcgagcggga agtagttctt cgtgccgtag ggcacgctca cgctgacacc gttgtcgttc
       61 tgatacccga aataggccgt cgtcttaccg gtccacgtgt cgatgcagtc gagcgacggc
      121 acgagcggcg cctgcccgcc cttgcggtac gcctcatcga ggaagggcag gtatggatcg
      181 atgcgcgtgt agagggacag atcctcgcac caatcgccgg tccggctcgc cacgcccgcg
      241 acgtaatcct ggccgtattg gttgacgagg aggggaccgc cggagtcgcc cgagcaaagg
      301 ttcgcgttcg gcttcttgcc gttcagcttc acgttgtgac cgcgcacggt cggcgtcaaa
      361 agcggcgcct cctgcggggt cggctcgtag tccgcgagcg tcggcgtgcc gaggatcggc
      421 gccttaccgg tgcgcttaat cccgaagcct tcgttgtcct gagtgtcttg actgagcgcc
      481 aggttcgcgc cccaaccgac cagcgtcgcg agcttgttcg tccagctggc gtccaagcga
      541 tttctaaaca gcggcagcgg atcgaagggc ggcttgcgat cgaggtacac gaccgccatg
      601 tcggcgtcga agtagttctt caggtagtcc ggatgcacgt gccagctgtc cgctttcgcc
      661 cacacggagg gctgaccggg cggcggaata tcgaacacgt tcccgatatc cgtctcgaaa
      721 tcattgcccc aatagacgta ggcgcccgcc acgtactcgg gcggcacgca gtgcgcggcc
      781 gtgagcacga cgcgtggcgc aaaatacgtc cctgagcaag ctcgccaatt caaatcgaac
      841 gtccgaaaca gcacgagcac gacgtacggc cgcccgatcg agggcacgtc gctcaccggc
      901 accggcgtgc cgcgcaccac gctctcttgc acgtggctcg tcgcctcgct cccgaggtcc
      961 gacgtcgcgc aaccaatggc cagccacgcg gctgcaccgc acatcccaaa cgcccgtttc
     1021 cacatgcttg tacctctccc agtgcggccc gcgtgggcgc gtcacttccg cgagacacct
     1081 cactagcatt acgtccggcg tgagatcaac tgctcgttcc cacgccggac gaagtgtaac
     1141 ctcctcgttt cggcgccttc tcggaccacg ccggaccaga gatcgttcga gacgttgacg
     1201 ttgacgagcc gcgaatgaac caagctgtct ccacccgggc aagcgtttgg tcgtggatag
     1261 tgacgcggcg ctacaccctg gcgctcgccg cgctcgtcag cgcaagtctc gcgtttcggc
     1321 tgcacgtctc acacgcctgc tcgctctggc aagacgaagc gagtacggcg cacgacgcct
     1381 acgcgccatg gccgctgctc ctgcacggtc cggagcgcga gcacccgccg ttgatgttct
     1441 ggatggtgcg gttcgctacc gagatcctcg ggcgaggtga cacgggcgtg cgctccgttt
     1501 cgctgttttt cggctgcgtg ctgctcgtcg ccgtttaccg cttgtgcctc gagctcgagc
     1561 tctcggccgc gcaagggctc gccgccgccg cttcactctc gctcacgccg ttcttcatga
     1621 agcacgcgat cgaagcgcgc caatacgcca ttaccggagc gctcgtcacg ttcagcacgg
     1681 tcttcgccct gcggctgctg cgagggccgt tccgtctccg gacgttcgtc ggcttcgccg
     1741 tgtgctccgt ggcggcctcg gcggttcagt ttttcgcgtt cgcgtacgcg ctttcgctat
     1801 ggggagccgt cgtcgtgggg acggcgcgcc gctggcgacc gcaaacattg tcggtgcgac
     1861 aaagagcggc gctcgccagc gtgctcggac tgacgctgct ctcgttcggc gcgatcaccg
     1921 tgctcgtggt ttcgctggca cattggtatg aaatgcgtgc tctcggcgag aaagcgcagc
     1981 accacttctc cgtgccgtcg atatggcgcg cgttttcctt cttggcgcgc ccgccttggc
     2041 ccgcgctcga accgttcgtg gcggcattcg ggctgctgtt catcgccgtg cgccgtcgca
     2101 gtctcgctgg gctcatccct ctggccctga cgttcgcgcc gatcggcgtg gccagcctga
     2161 tgtcgagcgg tcattcgctc ggcccgcgct acctctaccc gtctttcgtt ttttatcagc
     2221 tgggcgaagt cgctgccgtg ttcggggtct tcgagctctt ggctaagctc gccgggagat
     2281 gggggcggcc gcttgcggcg ctcggcgtgg tcgcgctcgt cgtgccgctc gggctgcgcc
     2341 tgcgcgaata cccgaccggt ttcggcgcgg gaaccgcgaa ctaccgcggt cttcaagcct
     2401 acttcgaggg tccgcgcggg cgcgacaccg cactcgtcgt cttcgtcggt tacgcaggcc
     2461 tcaggatcat gcagacgctg tatcccgtgc cgcacctcat gagtctggag gcgttcgagc
     2521 cgatacccgg tatcgatcgc tacctcatcg ccgaatttt
//
LOCUS       DATIML010000713         1908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_436929, whole genome shotgun sequence.
ACCESSION   DATIML010000713 DATIML010000000
VERSION     DATIML010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436929"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            363..785
                     /locus_tag="VLJ38_12315"
     CDS             363..785
                     /locus_tag="VLJ38_12315"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40351.1"
                     /translation="MDSAIATADSGNLDEQRQALIRRIALAVGTPAYIYDAAALRERL
                     TLLRQHFELVRFAQKALSNIHVLRLLRLGHALVDCVSEGELERALAAGFRTGVEPAEI
                     VYTADILTEATLERLVALQPPASDDRRADRARASLRPN"
     gene            931..>1908
                     /locus_tag="VLJ38_12320"
     CDS             931..>1908
                     /locus_tag="VLJ38_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HSU40352.1"
                     /translation="MTRPLNRRLFLRGLGGACVAAPFLGSLAERGVKAQAAAPRPRLI
                     AMFTQYGCITTRFFPAKSHGALTAADLEPTTLKHLAPYVDRLLIPRGIRAMNEWTATL
                     ARGQGNDPHTQVVGSYLTCQPVSPNSDDPFSFDQNTLFAPRPVGRSLDHVMAEQLSPS
                     GTPMFMRVGNQSDGAQSAISYSDAKVQYPGLGSPAQVWNGLTGLFTDGAPVSPDSYAA
                     ARGKSVVDLVRDDLATLERANMSRADQLKLEAWKELLDQTGTVVASAQCTQAGATALG
                     VTQANVDAAKTTLGGDMLTTKITDSMDGADLYSNFAALAAVCNANPVIFL"
BASE COUNT          348 a          633 c          614 g          313 t
ORIGIN      
        1 ctcgtccgag gccgcaacaa cgaggatggc ctcggcagag ggagacaagc tagcggatcc
       61 cgtgtcagcc acgataaccg tcgtgcctcg tacagcttcg gccgtcaaca tttccacgac
      121 cggcgtgctc cgactcgccg acgtgcttct tcacgcccgt ccgggtcatg tggaatttct
      181 cgaccgggtc ggtgatcgaa gtgtctgcac gtccgagctg ctcgagaacg cctcgggcgt
      241 cgcgtccgaa gcgcggcgaa agaggcagtc gaggccgcca tgtcagaggc tgaagcggcg
      301 cgcgcgcaaa atggatcatg cccgccattt tacccgtaac gagaaccgct taggttgctc
      361 gcatggactc tgcgatagcg acggccgaca gcggcaacct cgacgagcaa aggcaagcgc
      421 tgatccggag gatcgccctc gccgtaggca cgccagccta catctatgac gccgccgcgc
      481 tacgcgagcg gctaacgctg ctccgccagc atttcgagct cgtgcgcttc gcgcagaagg
      541 cgctctcgaa catccacgtc ttgcgcttgc tgcgcctcgg tcacgcgctc gtcgactgcg
      601 tttccgaggg cgagctcgag cgcgcgctgg ccgcgggttt tcgcactggg gtggagccgg
      661 ctgagatcgt ctacacggcg gacatcctca ccgaggccac cctcgagcga ctggttgcgc
      721 ttcagccgcc ggcgtcagac gatcgacgag ctgatcgcgc tcgagcgagt ctgaggccga
      781 actagccgca ccgccaccag gacgcgacga gagcaagccg tccacccttg gaccaatctt
      841 ctcgcgcaat cgcaaaggcg cgagaaagaa ttcaccccac ccgggttcgg tagtcggttc
      901 agactagtcg ctgctggagc tggaacaagc atgacgcgtc ctttgaaccg acgcttgttc
      961 ctgcgtggac tcggcggcgc gtgcgtcgcg gcgccgttcc tcggttcgct cgccgagcgc
     1021 ggcgtcaagg cgcaagcggc ggcgccgcgg ccgcggctca tcgcgatgtt cacacaatac
     1081 ggttgcatca cgacgcggtt cttcccagcg aagtcccacg gcgcgctcac ggccgccgat
     1141 ctcgaaccga cgacactgaa gcacctggcg ccgtacgtgg atcggctgct catcccgcgc
     1201 gggatccgag cgatgaacga gtggacggcc acgctcgcgc gcggacaggg taacgacccg
     1261 cacactcagg tcgtcggctc gtacctgact tgtcagcccg tgagcccgaa cagtgacgat
     1321 cccttcagct tcgatcagaa tactttgttc gcgccgcggc ccgtcgggcg ctcgctcgac
     1381 cacgtgatgg cagagcagtt gagtccgagc gggacaccaa tgttcatgcg cgtgggcaat
     1441 cagagcgacg gagcgcagtc ggcgatctcg tactcggacg ccaaggttca ataccccggg
     1501 ctcgggtcgc cggcgcaggt ttggaacgga ctcacggggc tcttcacgga cggagctccc
     1561 gtatccccgg actcgtacgc cgcggcgcgt ggcaagagcg tcgtcgatct cgtgcgggac
     1621 gacctcgcga ccctcgagcg ggcgaacatg agccgggcgg atcagctgaa gctcgaagct
     1681 tggaaggaac tgctcgatca gactgggacg gtcgtggcct ccgcgcagtg cacccaggcc
     1741 ggagcgacgg ccctcggcgt gacacaggcg aacgtcgacg cggcgaagac gacgctcggc
     1801 ggagacatgc tgacgacgaa aatcacggac agcatggacg gagccgatct gtactcgaat
     1861 ttcgcggcgc tcgcggccgt ctgtaacgcg aatcccgtca tctttctc
//
LOCUS       DATIML010000714         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5349995, whole genome shotgun sequence.
ACCESSION   DATIML010000714 DATIML010000000
VERSION     DATIML010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5349995"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..>1615
                     /locus_tag="VLJ38_12325"
     CDS             77..>1615
                     /locus_tag="VLJ38_12325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HSU40353.1"
                     /translation="MPLPPRRGLYDPQFEHDACGVGIVAQTNGQASHDIVKKGIDILL
                     NLVHRGACGCDPLTGDGAGILIQLPDPFFRRECEASEVELPAPGKYAVGCVFLPRDKH
                     DRRRCMHILEDKIFGTGQRLIGWRDVRVNESALGPMARASAPVIKQVFIGSTSEDEAE
                     FERKLFVIRKWAERTVRESNMAGRGAFYIPSLSSRTIVYKGLLLAEQLAGFYTELTDP
                     AMVSALAMVHQRFSTNTFPTWELAQPFRTLAHNGEINTVRGNAAWMSAREQLFDEEVF
                     GEDIKQILPIISPGGSDSAQLDNVAELLVHGGRSLPHVMMMLVPEAWQNDDQMSQRKR
                     DFYEYHSCLIEPWDGPAALAFTDGKRIGGILDRNGLRPARWTVTKDGLVVLASETGVL
                     DIPPENVERKGRLEPGRMFLVDTEAGRIVEDEELKDEIARRKPYGRWLRENKIALSEI
                     EVSPPTATRREHASLKQRQKAFGYTEEDVRLLMAPMAEKGEEATGSMGTDTPLAVLSQ
                     EPQLL"
BASE COUNT          299 a          537 c          521 g          258 t
ORIGIN      
        1 gcctgacctt cgtgcgctta cggcatataa tcgcggcaca ctcgcctctc taaccctcag
       61 gcagtgtttt tcccacatgc ccctacctcc ccgccgtggc ctctatgatc cccaattcga
      121 gcacgacgcc tgtggcgtcg gcatcgtcgc tcaaacgaac ggccaagcga gccacgacat
      181 cgtcaagaag gggatcgata ttcttttgaa cctcgtgcat cgcggcgctt gcggctgcga
      241 tccactcacc ggcgacggcg ccggcattct gattcaactg ccggatccgt tcttccgtcg
      301 cgagtgcgaa gcgagcgagg tcgagctgcc cgcgcctgga aaatacgccg tcggttgcgt
      361 gttcttgccg cgcgacaaac acgaccgtcg ccgctgcatg cacatcctcg aggacaagat
      421 cttcggcacg ggccagcgtc tgatcggctg gcgtgacgtg cgcgtgaacg agagcgcgct
      481 cggtcccatg gcgcgcgcga gcgcgccggt gatcaagcag gtgttcatcg gctcgacgtc
      541 ggaagacgaa gccgaattcg agcgcaagct gttcgtcatc cgcaagtggg ccgagcgcac
      601 cgtgcgcgag agcaacatgg cgggacgcgg cgcgttttac atcccgagcc tgtcgtcgcg
      661 caccatcgtc tacaagggcc tcttgctcgc cgagcagctc gcgggcttct acaccgagct
      721 caccgatccg gcgatggtga gcgcgctcgc gatggtgcac cagcgcttca gcaccaacac
      781 gttcccgacc tgggagctcg cgcaaccgtt ccgcacgctc gcgcacaacg gagaaatcaa
      841 caccgtgcgc ggcaacgccg catggatgag cgcgcgcgag cagctcttcg acgaagaagt
      901 gttcggcgaa gacatcaagc aaatcttgcc gatcatctcg cccggcggct ccgactcggc
      961 tcagctcgac aacgtcgcgg agctgctcgt gcacggcggg cgctcgctgc cgcacgtgat
     1021 gatgatgctc gtgcccgagg cgtggcagaa cgacgaccag atgtcgcagc gcaagcgcga
     1081 cttctacgag taccactcgt gcctgatcga gccctgggac ggaccggccg cgctcgcgtt
     1141 caccgacggc aagcgcatcg gcggcatctt ggatcgcaac ggcctgcgtc ccgcacgctg
     1201 gaccgtgacg aaggacgggc tcgtcgtgct ggcctccgag acgggcgtgc tcgacattcc
     1261 acccgagaac gtcgaacgca aagggcggct cgagccgggg cgcatgttcc tggtcgatac
     1321 cgaagcgggt cgcatcgtcg aggacgagga gctcaaggac gagatcgcgc gtcgcaagcc
     1381 gtacgggcgc tggctcaggg aaaacaagat cgcgctcagc gagatcgagg tgtcgccgcc
     1441 gacggcgacg cggcgcgagc acgcgtcgct caagcagcgg cagaaggcgt tcggctacac
     1501 cgaggaggac gtccgtctgt tgatggcgcc catggccgag aagggcgaag aggcgacggg
     1561 ctcgatgggc accgacacgc cgctcgccgt gctctcgcag gagccgcagc tcctg
//
LOCUS       DATIML010000715         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3037725, whole genome shotgun sequence.
ACCESSION   DATIML010000715 DATIML010000000
VERSION     DATIML010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3037725"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1204
                     /locus_tag="VLJ38_12330"
     CDS             <1..1204
                     /locus_tag="VLJ38_12330"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40354.1"
                     /translation="EHLPHLVILDVMMPGMSGWEVCRKIREAVSLAHTGVIMLTGIGE
                     ALNEMTSPLYGADAHVDKPFEFAELDRKIEETLERRQAGALGRPDAAAGDEIRLEVGG
                     RPTDDDEDDDLDDDDDDDLDDEDEDEDGDDLDMEDEDEDEDEAPPAAVKAATARAEKK
                     EAKAPKAPAASKAKAPSPVKAAPREKAERIAPKPKPVAAKAAPAKPAPKPERSKPASA
                     KATPAKPAVKPKPLPEPKIAAKAKPPAKAKPPAKAKPPAKAKPPAKTKPLPKTEPITK
                     KPVAKTKAKNLPEPSKKKSTAKAVTRGESKPVKTAPAKNKPAAIAATPKGKGKAPTAS
                     KGKAKAPIAGKAKAPPIPARAGKAPVKAAPRANKPVTKNSGRTPTPAATKSAKSPAKP
                     AGKRPLRG"
     gene            complement(1242..>1884)
                     /locus_tag="VLJ38_12335"
     CDS             complement(1242..>1884)
                     /locus_tag="VLJ38_12335"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HSU40355.1"
                     /translation="TPRDLPPPARPDFSDRAAERVAELVRLVGGGAFVLTTSLRSMRA
                     FHERLRQLAPEFRLLLQGEAPKATLLGAFRAAGDAVLVATTSFWEGVDVPGRALRLVV
                     LEKVPFAVPTDPIVRARAEVLEAEGKNAFMDFHVPAAAIALKQGFGRLVRTRRDIGIV
                     ALLDERVHKKGYGRILLDALPPAARTDDLGSVRSFWSEHGRAPLEGSGSAPVA"
BASE COUNT          426 a          651 c          625 g          182 t
ORIGIN      
        1 cgaacacttg ccgcatctcg tcatcctcga cgtcatgatg ccgggcatga gcggctggga
       61 ggtctgccgc aaaatccgcg aagccgtctc gctcgcgcac accggcgtca tcatgctcac
      121 gggcatcggt gaagcgctga acgagatgac gtcgccgctc tacggcgccg acgcgcacgt
      181 cgacaagccg ttcgaatttg ccgagctcga tcggaagatc gaagagacgc tcgagcgccg
      241 ccaagccggt gcgctcggtc gacccgacgc tgccgcaggc gacgaaatcc gcctcgaagt
      301 cggcgggcgc cccacggacg acgatgagga cgacgacctc gacgacgacg atgacgacga
      361 cctcgacgac gaagatgaag atgaggacgg cgacgacctc gacatggagg acgaagacga
      421 ggacgaggac gaggctccgc ccgcagccgt gaaagccgcg actgcgcgcg ccgaaaagaa
      481 agaagccaag gcgccaaagg ctcccgcagc gagcaaggcg aaagcaccga gccccgtcaa
      541 agcggcaccg agggagaaag cggaaaggat cgcccccaag ccgaaacccg ttgctgcgaa
      601 ggcggcaccg gcgaagccag ccccgaaacc cgaacgctcg aaacccgcct ccgcaaaggc
      661 cacaccagcc aagcccgcgg tgaaacccaa accgctgcca gagccgaaaa tcgcagcgaa
      721 agccaagccg ccagcgaaag ccaagccgcc ggcgaaagcc aagccgccag cgaaagccaa
      781 gccgccagca aagacgaagc ctctgcccaa gaccgagccg atcaccaaga agccggtggc
      841 gaagaccaag gcgaagaact tgccggagcc gtccaagaag aagtcgacgg cgaaagccgt
      901 gacgcgcggc gagagcaagc ccgtgaagac cgcaccggcg aagaacaagc cagcagcaat
      961 cgccgcaaca ccgaagggca aaggaaaggc ccccaccgcc tcgaagggca aagcgaaggc
     1021 gcccatcgcg ggtaaagcga aagccccgcc cataccggct cgcgcgggca aagcgccggt
     1081 caaggcagcc ccgcgcgcga acaaaccggt cacgaagaac agcggccgca ctcccacgcc
     1141 ggctgctacc aaatcggcga aaagcccggc aaagcctgcc ggcaagcgtc ccctccgggg
     1201 gtgagcggca gcgcgctgcc gaggggtccg gcgacgctac gtcacgcgac gggcgcgctg
     1261 ccggatcctt cgagcggcgc gcgaccgtgc tctgaccaaa agctccgcac cgatccgaga
     1321 tcgtcggtgc gagcggctgg cggcagcgcg tcgagcagga tgcggccgta acccttcttg
     1381 tgcacgcgct cgtcgagcag cgccacgatg ccgatatcgc gacgcgtgcg cacgagccgc
     1441 ccgaagcctt gtttgagggc gatggcggcc gcgggcacat ggaaatccat gaaggcgttt
     1501 ttgccttcgg cctcgagcac ctccgcgcgc gcccggacga tcggatccgt cggcaccgcg
     1561 aagggcactt tctcgagcac gacgagccgg agggcgcgcc caggcacgtc gacgccctcc
     1621 cagaagctcg tcgtagcgac gaggacggcg tcgcccgcag cgcgaaatgc gccgagcagc
     1681 gtcgccttcg gcgcttcccc ttgcagtagc aagcgaaact ccggcgcgag ctgccgcaag
     1741 cgctcgtgga aggcgcgcat cgagcggagc gaggtcgtga ggacgaacgc gccgccgccg
     1801 acgagccgca ccagctcggc gacgcgctcg gccgcgcggt cgctgaaatc gggacgcgct
     1861 ggtggcggca gatcgcgcgg tgtg
//
LOCUS       DATIML010000716         2453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1307620, whole genome shotgun sequence.
ACCESSION   DATIML010000716 DATIML010000000
VERSION     DATIML010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1307620"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1739)
                     /locus_tag="VLJ38_12340"
     CDS             complement(<1..1739)
                     /locus_tag="VLJ38_12340"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HSU40356.1"
                     /translation="MRAVVSIPMLLLAWLVSGCARIPHQRYALDRIDFVGNHVLGDGE
                     LEDHIASRESPKFLGLFEGFVDEYEVFDRYVLERDLERVERYYRAKGYYDARARVARV
                     YASGKHVRVEIVLEEGHPVLVGRVDVHGLEALSPSLRAKAEDFARRRMRLQKPLEEER
                     LHAVEQEIARLLGDEGYAWVKVKGSADVDLPHRVASVGFWIEPGKPARLGAVRIEGLE
                     KIPEGPVRRALNLKPGEPYSLSDLEAARQAVLDLGVFSAVTIEPDLPPDAGEPDVMPL
                     LVKVEVTKLRSVHLGGGVEIDSLKSEIHATAGWEDRNFLGGFRRFQVEAVPGVVLYPT
                     HLPNLKAPRRLLPEGRLRAEFRQPGFLEARTTGVLRGQFSIYPLLLSAELPPGSPIIG
                     YRELRGSVGLERNIQKLNLSLTQNVQNNAPFTYAGPLDPDLVSVLASYPELFADLELT
                     DSRVSPHSGVSLRNTFQVAGLGGDARDVKIVPDVRGYIPLGRKVTLALRASVGLLFPA
                     NYGQTVEPNSMTRTPGDATRQEWVRDSELMFLRGLFSGGPGSDRGYGLREIGPHGLVP
                     FYAPGVTGTQAGST"
     gene            1779..2198
                     /locus_tag="VLJ38_12345"
     CDS             1779..2198
                     /locus_tag="VLJ38_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40357.1"
                     /translation="MHRIRLLFVAGLATACGSSLPLPRQVAPSEDAFFEVPYPPPPAL
                     SELVPKRPKGKNVVFQDGGWTWRGRYYVWERGGWVTPDASARFCPWAFHFTADGRALF
                     SKSHWVDTQGHYLRPAAILVPAVTPPNEVTAEFQTGR"
     gene            complement(2213..>2453)
                     /locus_tag="VLJ38_12350"
     CDS             complement(2213..>2453)
                     /locus_tag="VLJ38_12350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40358.1"
                     /translation="SAAHVIGRAVGATLLVCGAHFLVRALTGKTPLDHAKDWLGRGKS
                     PQPLAAPRPPTDPVDESSWESFPASDPPAHSPKNA"
BASE COUNT          424 a          804 c          814 g          411 t
ORIGIN      
        1 gtggaccccg cctgtgtgcc ggtgacgcca ggcgcgtaaa acgggaccaa gccgtgcggg
       61 ccgatttcac gcaggccgta accgcgatcg gagccagggc cgcccgaaaa tagcccacgc
      121 aagaacatga gctccgagtc acgcacccac tcttgtctcg tcgcgtcacc cggggtgcgc
      181 gtcatcgagt tcggctcgac cgtttggccg taattcgcgg ggaagagcag gccgacgctc
      241 gcgcggagtg ccagcgtcac cttgcgcccg agcggaatgt agccgcgcac gtcgggtacg
      301 attttaacgt cgcgcgcatc gccgccgagc cccgccactt gaaaggtatt gcgcagggag
      361 acaccggaat gcggactcac gcgactgtcc gtgagctcca gatccgcaaa tagctccggg
      421 taggacgcga gcacggagac gaggtcggga tcgagcggcc ccgcgtaggt gaagggcgcg
      481 ttgttttgca cgttctgcgt cagtgacagg ttcagcttct gaatgttgcg ctcgagcccc
      541 acgctgcccc gaagctcgcg atacccgatg atgggcgaac ccggcgggag ctcggcgctc
      601 aagagcaaag gatagatgct gaactgtccc cgaaggacgc ccgtcgtgcg cgcctcgagg
      661 aagcccggct ggcgaaactc ggcgcgcagc cgaccttcgg gtaagagcct gcgcggcgcc
      721 ttgaggttcg gcaagtgcgt cggatacagc acgacgccgg gcacggcttc gacttggaag
      781 cgccgaaagc caccgaggaa gttgcgatct tcccagcccg ccgtcgcatg gatttccgac
      841 ttgagcgagt cgatttcgac accgccgccg aggtggacgc tgcgaagctt ggtgacctcg
      901 accttgacga gcaagggcat gacgtccggc tcgccggcgt cggggggcaa gtccggttcg
      961 atggtgacgg cgctgaagac accgagatcg agcaccgctt gacgcgcggc ctcgaggtcg
     1021 ctcagcgaat acggttcgcc cggtttgagg ttcagcgcgc gccgcacggg cccctcgggg
     1081 attttctcga gaccctcgat gcgaacggca ccgaggcgcg cgggcttacc gggttcgatc
     1141 caaaagccga cgctcgccac ccgatgcggc aggtcgacgt cagccgaacc cttgaccttg
     1201 acccaggcgt agccttcgtc cccgagcagc cgagcgattt cttgctcgac tgcgtgcagc
     1261 cgctcttcct cgagcggctt ctgcaggcgc atgcggcgtc gcgcgaaatc ttccgccttg
     1321 gcgcggaggc tcggcgacag ggcttcgagc ccgtgcacgt cgacgcgccc gacgagcacg
     1381 gggtgacctt cttcgagcac gatctcgacg cggacgtgct tgccggaagc gtaaacacgc
     1441 gcgacccgag cgcgtgcatc gtaatacccc ttggctcgat agtaacgctc gacgcgctcg
     1501 agatcacgtt cgagcacata gcgatcgaac acttcgtatt cgtcgacgaa gccctcgaac
     1561 aggcccagaa acttcggaga ttcccggctc gcgatgtgat cctcgagctc tccgtcgccg
     1621 agcacgtgat tgcccacgaa atcgatgcgg tcgagcgcat agcgctggtg tggaattcgc
     1681 gcgcagccgc tcacgagcca cgcgagcaag agcatcggta tcgacacgac tgcgcgcatc
     1741 cggcgcgctc cggcgcgatt cgtgctgtgc ccgtggacat gcaccggatt cgactgctct
     1801 tcgtcgccgg gctggcgact gcttgtggtt cgagcctgcc actgccgagg caagttgccc
     1861 cctcggagga cgcgttcttc gaggtgccgt atccgcctcc gcccgcgctt tcggagctcg
     1921 ttccgaagcg accgaaaggc aagaatgtag tgtttcaaga cggaggctgg acctggcgcg
     1981 gccgctatta cgtctgggag cgtggcggct gggtcacgcc cgatgcgtcg gcgcgctttt
     2041 gcccgtgggc ctttcacttc accgcggacg gccgcgcgct cttttcgaag agccattggg
     2101 tcgacacgca gggccactac ctcaggccgg ccgcgatcct cgtacctgcc gtgacgccgc
     2161 cgaacgaggt caccgccgag ttccaaaccg ggaggtgaag gacgactcac gttcaggcat
     2221 tcttcggcga atgtgccggg ggatcgctcg ccgggaacga ctcccacgac gactcgtcca
     2281 cgggatcggt gggcgggcgc ggcgccgcca gcggctgcgg cgacttgccg cgcccgagcc
     2341 agtccttcgc gtgatcgagc ggcgtcttgc cggtgagcgc gcgcacgaga aaatgagcgc
     2401 cgcacacgag gagggttgcg cctactgccc tgccgatgac gtgtgcagcg ctc
//
LOCUS       DATIML010000717         5673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1307820, whole genome shotgun sequence.
ACCESSION   DATIML010000717 DATIML010000000
VERSION     DATIML010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5673
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1307820"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..649
                     /locus_tag="VLJ38_12355"
     CDS             <1..649
                     /locus_tag="VLJ38_12355"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU40359.1"
                     /translation="ELPKDLQPKLLRVLERREVRRLGGQRTLPVDVRLIAATNRNLQA
                     EVARGNFREDLYFRLAAAHVHVPPLRDRMDDLPLLVEHFLSHAKPPRKLTDIPPTVWN
                     MFTAHRWPGNVRELSNAVQRFIVTPERVFANPWAGAPERDSRPPGQSADSRPPNESAN
                     VQPLRVARREASDAFERSYLEQLLARTGRNVTRAAAIAEVSRQMVQKLMRRHGID"
     gene            complement(698..1657)
                     /locus_tag="VLJ38_12360"
     CDS             complement(698..1657)
                     /locus_tag="VLJ38_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40360.1"
                     /translation="MIDLTKRVRIAPKRTGGATEILDLATVRGELETKLLDLGDASAL
                     QAHLRELCAPPSERSEPAPDLTQTLVLAPAPNLAETCVIAPAPNLAETSIIAPARAEL
                     DRTMYDGGALRDYARMLVEDQREESAVPTTEAGPGALRESVKSRSRAWAAVSARGALG
                     ARWASACMHWRAARRHWNAARPSRRLVLALLPLALVASAAGTIVTLTRQSPPAIPEPQ
                     PAAVMPSRPLPSAPARPVPPASMPAPVQAPLPTPAASAPRHSVETASLVADPVLERAA
                     LRAAFDGNKREAIGAYERLAARPGGEPFKLAARLLREDRVRKP"
     gene            complement(1654..2784)
                     /locus_tag="VLJ38_12365"
     CDS             complement(1654..2784)
                     /locus_tag="VLJ38_12365"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HSU40361.1"
                     /translation="MIPKHVFEQTLLQFFEPIVPFLDDPAVSEVMINGPDQVYVERRG
                     QLELTGARFETREALMAALRNLSQYVGKHVSEERPILEGRLPDGSRVEALLPPIAPDG
                     PHVAIRRFFKETLTVERLVEFGSLPPIAAAALEAFVASKLNVLIAGGTGSGKTSMLNA
                     LSSFIPDGERVVVIEDSREIQFQKPHVVQLEARPADARGSGAVSIRDLFRATLRMRPD
                     RVIVGEIRGGEALDIVQAMTSGHGGCMGTLHASYPRDTLTRLETMAMMSDVDMPLAAL
                     RAQIGSGVELIVQVSRLQDGSRKVTHVTEVLGFELETQKYLLADLFVREYHGTDEHGR
                     IRSELVPTGVMPSFLTKLAEHGRSLPAELMAEIDRRQAESDK"
     gene            complement(2781..3386)
                     /locus_tag="VLJ38_12370"
     CDS             complement(2781..3386)
                     /locus_tag="VLJ38_12370"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40362.1"
                     /translation="MTERIRKHESAPRFTLGILALVMSSSWGCASTAQQARRDRLELE
                     RERSTAELIRKGEASSAVGDMTRAEQYFVAALHSGTRERFIVSRLLMVCVADQRYPVA
                     AEYADDYLRRHPGDLDIAFAAASIHAALGQRERARALLEALIQQRPAWPEPHFTLASV
                     LREDNDAEALALADTHDLTYLKLEPRGPLAEMAKARLRRTP"
     gene            complement(3383..4246)
                     /locus_tag="VLJ38_12375"
     CDS             complement(3383..4246)
                     /locus_tag="VLJ38_12375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU40363.1"
                     /translation="MSTLLFEIAHEDGRRETAPVEGMRALVGSASHCDVRLPMGDAAD
                     EHLLVELVGDTLRVRTLTDAVATTLDGAPVHTAVLPEGAVLGVGRSRLAVRALSERPE
                     TARSSAKRGSNPTQLVAVALLAVLGVAVLVVGLRPESAIAPAPDKAPELFAETPPSCP
                     KDRDTGALAFAEEQADMAVATHERVPFAAHEGVVAVGLYETAAACFRLAGATERAGDA
                     EQAAEALKGELGDDFRARRLRLSHVLALEDYALAKVDVAALRALTAGKQGPYVEWLAK
                     VSKQLRAKEER"
     gene            complement(4258..5166)
                     /locus_tag="VLJ38_12380"
     CDS             complement(4258..5166)
                     /locus_tag="VLJ38_12380"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSU40364.1"
                     /translation="MSLGGFAFFRAAAWLAVGSALFTLGYVGAASPSGDARRLGLRGL
                     KRQRALSQNPVWALLEPGVRWLGARLAGLVSDDLRRRLNRQIALAGDFLGLLPEEVLG
                     LSVLTTAAGLVAGLVLGRVSGLGNLVVVACTLAGAGLPHSRIASTAAERMKEVNRRLP
                     HAIDLLALAMGAGLDFPGSVRQVIEKSGSPEEPVVEEFTLILQGLKLGRTRRQALEEF
                     GERVPTDAVLEFVGSVVQAELRGNPVADVLRIQAEISRRKRTVRAEELAAKAGVAMML
                     PLVFVFLAILTVIVAPILLRLQLAGM"
     gene            complement(5163..>5673)
                     /locus_tag="VLJ38_12385"
     CDS             complement(5163..>5673)
                     /locus_tag="VLJ38_12385"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSU40365.1"
                     /translation="LIVALANALKTVPSASAALGQLVTVLPQPMRLEIERLLKEMRVG
                     STLEQALLSMSARLGSRDLDSALSAVLIGLQVGGNLPAVLESTAATIREMNRLEGVVR
                     TKTSEARAQLWVLALFPFVIALGFHAIDPEYFVPLQTTVLGSIATAGAGSFWALSLFT
                     ARKILKVDL"
BASE COUNT          902 a         1965 c         1946 g          860 t
ORIGIN      
        1 tgagctgccg aaagacttgc aaccgaagct actacgcgtg ctcgagcgac gcgaagtgcg
       61 gcgtctgggt gggcagcgca cgctgccggt cgacgtgcgg ctcatcgccg cgacgaatcg
      121 caacctccaa gccgaggtcg cgcgcggcaa tttccgcgag gatttgtatt ttcgcctcgc
      181 cgccgcgcac gtgcacgtgc cgccgctgcg cgaccggatg gacgatttgc cgctcctcgt
      241 cgaacatttt ctctcgcacg ccaagccgcc gcgcaagctc acggacattc caccgacggt
      301 gtggaacatg ttcacggcgc accgctggcc gggcaacgtg cgcgagctct ccaacgccgt
      361 gcagcgcttc atcgtcactc ccgagcgcgt ctttgcgaac ccgtgggcgg gcgcaccgga
      421 gcgcgacagc cgcccgccgg ggcagagcgc cgactcgcgt ccgccgaacg aatccgcgaa
      481 cgtccagccg ctgcgcgtcg cgcgacgcga ggcgagcgat gccttcgaac gctcgtacct
      541 cgagcagctg ttggcgcgca cggggcgcaa cgtgacgcgc gcggcggcga tcgcggaggt
      601 gtcgcgccaa atggtgcaaa agctcatgcg ccgtcacggg atcgactgag ccgcacggct
      661 tgaagaacgg cgcggtgcgg cgcatgcaag tcgtgcgtca gggcttgcgc acgcggtctt
      721 cgcgcagaag tcgcgccgcg agcttgaacg gctcgccgcc gggacgcgcg gcgaggcgct
      781 cgtaggcgcc gatggcctca cgcttgttgc cgtcgaaggc ggcgcggagg gcggcgcgtt
      841 cgagaacggg atcggccacg agcgaagccg tttccacgct gtgtcgtggc gcactcgcgg
      901 cgggcgtcgg gagcggcgcc tggacggggg cgggcatgga cgccggaggc acgggccgcg
      961 ccggtgccga cggcaagggg cgactcggca tgactgccgc cggctgaggc tcgggtattg
     1021 ctggcggcga ctggcgcgtg agcgtcacga tcgtgccggc agcggacgcg acgagcgcca
     1081 acggaagcaa cgcgagcacg agccttctcg acgggcgagc ggcgttccaa tggcgacgcg
     1141 cagcgcgcca atgcatgcag gcgctagccc agcgcgcacc gagggcaccc cgcgcgctca
     1201 ccgcagccca cgcacgcgag cggctcttga ccgactcccg cagcgcacct ggtcccgcct
     1261 ccgttgttgg cacggcggac tcttcccgct ggtcctcgac gagcatccgc gcgtaatcgc
     1321 gcagcgcccc gccgtcatac atggttcgat cgagctcggc gcgcgcgggt gcgatgatgg
     1381 acgtttctgc gaggttcggc gccggcgcaa tgacgcacgt ttctgcgagg ttcggcgccg
     1441 gcgcgagaac gagcgtctgc gtgagatccg gcgcgggttc gctgcgctcg gacggcggcg
     1501 cgcaaagctc gcgcaagtgt gcttgtaacg cggaagcatc gcccaaatcg aggagcttgg
     1561 tttcgagctc accgcgtacc gtcgcaagat cgagtatttc ggtcgcgccg cccgtgcgct
     1621 tcggcgcgat gcgcacccgc ttcgtgagat cgatcatttg tcgctctccg cttggcggcg
     1681 gtcgatttcg gccatgagct ccgcgggtaa actccgcccg tgctcggcga gcttcgtgag
     1741 aaagctcggc atgacgccgg tcggcacgag ctcgctccgg atgcgcccgt gctcgtcggt
     1801 gccgtgatac tcgcgcacga acagatcggc gagcaggtac ttctgcgttt cgagctcgaa
     1861 gccgagcacc tccgtgacgt gcgtcacttt acggctgccg tcttgcaggc gcgagacctg
     1921 cacgatgagc tcgacgcccg aaccaatttg cgcccgcagc gcggcgagcg gcatgtcgac
     1981 gtcgctcatc atcgccatcg tctcgaggcg cgtcagcgtg tcgcgcggat agctcgcgtg
     2041 cagcgtcccc atgcagccgc cgtgtccgct cgtcatggcc tgcacgatgt cgagcgcctc
     2101 gccaccgcgg atttcgccga cgatcacgcg gtcggggcgc atccgaagcg tcgcgcggaa
     2161 caggtcgcga atgctcacgg cgccgctgcc gcgcgcgtcg gccggccgcg cttcgagctg
     2221 cacgacgtgc ggcttctgaa actggatttc gcgcgaatcc tcgatcacga cgacgcgctc
     2281 gccgtccgga atgaagctcg agagcgcgtt caacatcgag gtcttcccgc tgcccgtacc
     2341 gcccgcgatc agcacgttga gcttcgacgc cacgaacgcc tcgagagctg ccgcggcgat
     2401 cggcggcagg gacccgaact cgacgagccg ctcgacggtg agcgtctcct tgaagaagcg
     2461 gcgaatggcg acatgcggcc cgtccggcgc gatgggcggc agcagcgcct cgacgcgcga
     2521 accgtccggt aagcgccctt cgaggatggg ccgctcttcg ctcacgtgtt tgccgacgta
     2581 ttgggacaga ttgcggagag ccgccatgag cgcctcacgc gtttcgaagc gcgcgccggt
     2641 gagctcgagc tgcccgcgtc gttcgacgta gacctggtcg gggccgttga tcatgacctc
     2701 gctgacggcc ggatcgtcga gaaacgggac gatgggctcg aagaattgga gcagcgtttg
     2761 ctcgaagacg tgtttcggaa tcatggcgtt ctccgcagcc gcgccttcgc catttcggcg
     2821 agcggacctc gtggttcgag cttcaaataa gtgagatcgt gagtgtcggc gagcgcgagc
     2881 gcttccgcgt cgttgtcctc gcgcagcacg ctcgcgagcg tgaagtgcgg ttccggccac
     2941 gccgggcgct gttggatcag cgcttcgagg agtgcgcgcg ctcgttcgcg ttggccgagc
     3001 gcggcgtgaa tggacgcagc ggcaaaggcg atgtccagat cgcccggatg ccggcgcaag
     3061 tagtcgtcgg cgtactccgc ggcgaccgga taacgctggt cggcgacgca caccatcagc
     3121 agccgcgaca cgatgaagcg ctcgcgcgtc ccgctatgca gcgccgcgac gaagtactgc
     3181 tccgcgcgcg tcatgtcgcc gacggcgctc gaggcttcac ctttgcggat gagctcggcc
     3241 gtcgagcgtt cgcgctcgag ctcgagccgg tcacgccgcg cttgctgggc cgtgctggcg
     3301 cagccccacg aagagctcat gacaagggcc aaaatgccga gcgtgaagcg cggcgccgac
     3361 tcgtgtttcc ggatccgctc ggtcatcgtt cctccttggc tcggagctgt ttgctgacct
     3421 tcgcgagcca ttcgacgtac gggccttgct tgccggccgt gagggcgcgc agcgcggcga
     3481 cgtcgacctt cgcgagcgcg tagtcctcga gcgccagcac atgggacagt cgcaggcggc
     3541 gagcgcggaa gtcgtcgccg agctcgcctt tgagcgcctc cgcggcttgc tcggcatcgc
     3601 cggcgcgctc ggtcgcgccg gcgagtcgaa aacacgccgc agccgtctcg tacaacccga
     3661 cggcgacgac gccctcgtgc gcggcgaacg gcacgcgctc gtgcgtcgcg acggccatgt
     3721 cggcttgctc ctccgcgaac gcgagagcgc cggtgtctct gtccttcgga cagctcggcg
     3781 gcgtctcagc aaagagctcc ggtgccttgt ccggggcggg tgcaatggcg ctctcgggcc
     3841 gcaaacccac gaccaacacc gcgaccccga gcacggccag cagcgcgacg gcgacgagct
     3901 gggtcggatt gctgccgcgc ttggcggaag aacgtgccgt ttcggggcgt tcggacagcg
     3961 ctctcaccgc gagccgactg cggccgacgc cgagcacggc gccttcgggc agcaccgccg
     4021 tgtgcacggg cgcaccgtcg agcgtcgtgg cgacggcgtc ggtcagcgtg cgaacgcgca
     4081 gcgtgtcccc gacgagctcg acgagcaggt gctcgtcggc cgcgtcaccc atcggcaagc
     4141 gcacgtcaca atgggacgcg ctgccgacca aagcgcgcat gccctcgacc ggcgccgttt
     4201 cccgccggcc gtcctcgtgt gcgatctcga acagtagggt actcatcggc tctcctgtca
     4261 catgcctgcg agctgtagcc gcagcagaat cggggcgacg atcacggtga gaatcgccaa
     4321 gaagacgaag acgagcggca gcatcatcgc gacgcccgct ttcgccgcga gctcctcggc
     4381 acgcacggtg cgcttacgcc gcgagatctc ggcttggatc cgcagcacgt ccgcgacggg
     4441 attgccgcgc agctcggctt gcaccaccga cccgacgaac tcgagcacgg cgtcggtcgg
     4501 cacgcgctcg ccgaactcct cgagcgcttg gcggcgcgtg cggccgagct tcaacccctg
     4561 caaaatcagc gtgaattcct cgaccaccgg ctcttccggg ctgcccgatt tctcgatcac
     4621 ctgccgcacg gagccgggga aatcgagccc ggcgcccatc gcgagcgcga gcagatcgat
     4681 ggcgtgcggc aaacgccggt tcacctcttt catccgctcg gcagcggtgc tcgcgatgcg
     4741 cgagtgcggc agcccggctc ctgcgagcgt gcaggccacg acgacgaggt taccgaggcc
     4801 cgacacgcgc cccagcacca ggcccgcgac gagtccggcc gccgtcgtca gcacgctgag
     4861 accgagcacc tcctccggta agagcccgag gaagtcgccg gccagcgcga tctgtcggtt
     4921 caagcggcgg cgcaagtcgt cggaaaccag cccggccagg cgcgcgccga gccagcgcac
     4981 gccgggctcg agcagcgccc acacgggatt ttggctcaac gcgcgctggc gcttgagccc
     5041 gcgcaagccg agccgccgcg cgtcgccact cgggctcgcg gcgccgacgt acccgagcgt
     5101 gaagagcgcg ctgccgacag cgagccacgc cgcggcgcgg aagaacgcaa agccgccgag
     5161 gctcacaggt ccaccttcaa gatcttgcgc gccgtaaaaa gcgacagcgc ccagaagctc
     5221 ccggcgcccg cggtcgcgat cgagccgagc acggtcgtct gcaagggcac gaagtactcg
     5281 gggtcgatgg cgtggaatcc gagcgcaatc acgaacggaa acagcgcgag tacccacagc
     5341 tgagcccgcg cctccgaggt cttcgtgcgc acgacgcctt cgagccgatt catctcgcgg
     5401 atggtcgccg ccgtgctttc gagcacggcc ggcaggttgc cgccgacctg cagcccgatc
     5461 agcaccgcgg agagcgcgct gtcgaggtcg cgactgccga gccgcgccga catgctcaag
     5521 agcgcttgct cgagcgtgct accgacacgc atttccttga gcaaacgctc gatttcgagc
     5581 cgcatcggct gcggcaacac ggtgaccagc tgcccgagag ctgcggacgc actcgggacc
     5641 gttttgagcg cgttggcgag cgccacgatc aac
//
LOCUS       DATIML010000718         1802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4190342, whole genome shotgun sequence.
ACCESSION   DATIML010000718 DATIML010000000
VERSION     DATIML010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4190342"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            328..>1802
                     /locus_tag="VLJ38_12390"
     CDS             328..>1802
                     /locus_tag="VLJ38_12390"
                     /inference="COORDINATES: protein motif:HMM:NF014301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA domain-containing protein"
                     /protein_id="HSU40366.1"
                     /translation="MADLRQLTFEGENAEAYFSFDGRFLTLQSRLPGQDCDRIYRLPV
                     FDAAPERIPVSSGDGATTCSYFLPGDQEMIFASTHLGGSACPPKPDRSKGYVWALYDD
                     YDIFKTSVTGGPLTRLTDTKGYDAEGTVCAKDGAILFTSVRDGDLELYRMDKDGKNVV
                     RLTHTPGYDGGGFFNRDCTRIVWRAARPKPGPELDEYRALLAQHLVRPTKLEIYVANA
                     DGSDATQLTYLDAASFAPFFHPSSKRVLFASNYGDPNGREFDLWAVDDSGARLERITT
                     APGFDGFPMFSPDGSLLAFSSNRNTPAGSHDTHVFLAHWAEGTVTPTLETAADRTLTD
                     VRFLADSAREGRGLGLAGLTAAGDYIAERFATLGVEAAGDHGYRQPFVVPTALERANA
                     TSLAFGGTPVDAKSFAPLGYSSPRVHAAGELVFAGYGIVDKERKRDDFAGLAVKGKIV
                     LVRRFVPEAPEFTQTEDKRRFGDLRYKAWLAKERGAKALIVV"
BASE COUNT          274 a          655 c          584 g          289 t
ORIGIN      
        1 tcagcaaccg cagccgagct cctggtcagg agccctagcg ttcgtcctgg cgcttcgtct
       61 cgcaccccgg agcgctcaac gcccgcgctc gcctcgctgc acgtcgcgac attcgttcgc
      121 actctcgtct gtgggtcgcg cctgctcacg cgcgtcgcga tcacgcgcgt cgccgtcagg
      181 cgcctggcca tcacggtgcc ccccctgatg gccgcatgtg gcgcgcaaac gccggctccc
      241 acgccaccgc cacggccctc cgccgtcgca atggcgcggc cggcgccgcc tcccgtcttc
      301 gggcctgcgc ggcccgacga gaagcatttg gctgatctga ggcaactcac gttcgagggc
      361 gagaacgccg aggcttactt ctcgttcgat gggcggttct tgacattgca gtcgcggctg
      421 ccgggacagg actgcgatcg gatctatcgc ttgcccgtgt tcgatgcggc acccgagcgg
      481 atccccgtgt cgagcggcga cggcgcgacg acgtgctcgt atttcttgcc gggcgaccag
      541 gagatgattt ttgcgtcgac gcatcttgga ggctccgcat gtccgcccaa gccggaccgg
      601 agcaagggtt acgtttgggc gctctacgac gactacgaca tcttcaagac gagcgtcacc
      661 ggcgggccgc tcacgcgtct gaccgacacg aaaggctacg acgccgaagg gacggtctgc
      721 gccaaggacg gcgcgatcct gtttacgtcc gtgcgcgacg gcgatctcga gctctatcgc
      781 atggacaaag acggcaagaa cgtcgtgcgg ctgacgcaca cgcccggcta cgacggcggc
      841 ggcttcttca accgcgattg cacgcgcatc gtttggcgcg ccgcgcggcc caagcccggc
      901 cccgaactcg acgagtaccg cgccctgctc gcgcagcacc tcgtgcgccc gacgaagctc
      961 gaaatctacg tcgcgaacgc cgacggctcc gacgcgacgc agctcaccta cctcgacgcg
     1021 gcgtcgttcg cgcctttctt ccacccctcg agcaagcgcg tgctcttcgc gtcgaactac
     1081 ggcgatccga acggccgcga attcgacctc tgggcggtcg acgactcggg cgctcgactc
     1141 gagcgcatca cgaccgcgcc gggcttcgac gggttcccga tgttctcgcc ggacggctcg
     1201 ctgctcgcct tttcgtcgaa ccgcaacacg ccggccggct cgcacgacac gcacgtcttc
     1261 ctcgcacact gggcggaggg caccgtcacg ccgaccctcg agacggccgc cgatcgcacg
     1321 ctcaccgacg tgcgctttct cgccgattcg gcgcgcgaag gacgcgggct cggcttagcg
     1381 ggactcacgg ccgccggcga ctacatcgcc gagcgcttcg cgacgctcgg cgtcgaagcg
     1441 gcgggcgacc acggttaccg gcagccgttc gtcgtgccga cggcgctcga gcgcgccaac
     1501 gcgacgagcc tcgcgttcgg cggcacgccc gtcgacgcga aatcgttcgc gccgctcggc
     1561 tactcgagcc cgcgcgtgca cgccgccggc gagctcgtgt tcgcggggta cgggatcgtc
     1621 gacaaggagc gcaagcgcga cgactttgcc gggctcgccg tgaaggggaa gatcgtgctc
     1681 gtgcgacgct tcgtgcccga agcgccggag ttcacgcaga ccgaggacaa gcgccgtttc
     1741 ggcgacttgc gttacaaggc gtggctcgcc aaggagcgcg gcgccaaagc gctgatcgtc
     1801 gt
//
LOCUS       DATIML010000719         2943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1596183, whole genome shotgun sequence.
ACCESSION   DATIML010000719 DATIML010000000
VERSION     DATIML010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1596183"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..956
                     /gene="proC"
                     /locus_tag="VLJ38_12395"
     CDS             120..956
                     /gene="proC"
                     /locus_tag="VLJ38_12395"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HSU40367.1"
                     /translation="MQPQRIGLIGAGNMSLALVRGLVSSGRVSAEQVRASDPSEARRA
                     LLAKEHGIGVSESNAEVARWANVVVLAVKPQMIEPAIASIADALGPDATIVSIAAGVP
                     IAALEARLPAGARVVRAMPNTAAIALAGATGLSGGSRATADDLALTRSLFEAVGSVVF
                     LDESLLDAVTGLAGSGPAYVMLVIEALADGGVKMGLPREAALLFAAQTVYGSAKLLLE
                     TKEHPARLKDMVTSPAGTTIAGLSALESGGVRGSLIDAVERATLRSRELAADAVARLK
                     KA"
     gene            complement(1171..>2943)
                     /locus_tag="VLJ38_12400"
     CDS             complement(1171..>2943)
                     /locus_tag="VLJ38_12400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40368.1"
                     /translation="LLAPVAKREKAPEKTDAASKQAKPADTTLGVLTLVHPGTADRAL
                     PLKLSGVDDEAARAIVERGFWLDSFEQAPTAELSGWVAGNDGFVGVRVKLDGTVLVGA
                     PEPHLDRALLRGRFGLVVGHSGGLRETVDGGFEWSDGELPGEPDLRPLKTSGTTSGCT
                     PLGCAVSGWLRVGWKMGERDRLTLATVPEPTHLPGSGGNRWSLECEATGEASKPALHQ
                     SPANDDRSVSPWDPLAEVPPPVRARSDLGIETSNEADLRLFHAYAWGPPGDGWSRQAR
                     WLVRVRDPYRVSDAVWSTAPSPVAWSSAVLATDAFGRSPSGPPASWRVVTDPLRHAGL
                     LLVSIRGMVEIYLLEEGSRIARVKTAGTTGVIASAAFAGGRFYVAALGEARALRLYRV
                     EQGELELLGEFPEVAGHSEPPALAPAARGESFGVWLHDADYYLFPFDLSNRRFDAPIV
                     ERASDVSAMPAPCTTGEDGYVVSDALALEPNVDLNSPSVATGNGIEARVIVSPSRICM
                     DVLAAPLGAPGDERARAHRKSAHKDRAAADSAGLVRAPSALPRGDDAMDVSVRGIPAR
                     DAGPGAPLVLDAPDGSRKAYRCRD"
BASE COUNT          477 a         1003 c         1039 g          424 t
ORIGIN      
        1 cgagcggcga cgagccacgt aaactgccgg cgaaaccggc gctagggcac tttcagcatg
       61 cgaccgacgc ctcgcgtttc tccccaatta ccgaacccct catgccaaga taacccggca
      121 tgcagcccca acgcatcgga ctcataggcg cgggcaacat gtccctcgcg ctcgtgcgcg
      181 gcctcgtgag ttccgggcgc gtgtcggccg agcaagtccg ggcgagcgat ccgagcgaag
      241 cacgccgcgc gctgctcgcg aaggagcacg gcatcggcgt gagcgagagc aacgccgaag
      301 tcgcgcgctg ggcgaacgtg gtcgtgctcg ccgtgaagcc gcagatgatc gagccggcga
      361 tcgcgagtat cgccgacgcg ctcgggccgg acgccaccat cgtctccatc gccgcgggcg
      421 tgcccatcgc ggcgctcgag gcacggctgc cggcgggggc gcgcgtcgtg cgagcgatgc
      481 cgaacacggc tgccatcgcg ctcgcgggcg caacgggact gagcggcggg agccgcgcca
      541 ccgccgacga tctcgccctg acgcgctcgc tgttcgaggc cgtgggcagc gtcgtgttcc
      601 tggatgaaag cctgctcgac gccgtcacgg gactggccgg cagcggcccc gcctacgtga
      661 tgctggtgat cgaagcgctc gccgacgggg gcgtgaagat ggggcttccg cgcgaggccg
      721 ccttgctctt cgcggcgcaa accgtctacg gctcggccaa gctgttactc gaaaccaaag
      781 agcaccccgc gcgcctcaaa gacatggtga cgagtccggc ggggacgacg attgccggac
      841 tctctgcact cgagtcgggc ggcgtgcgcg gcagtctcat cgacgcggtc gaacgcgcga
      901 cgttgaggtc acgcgagctc gctgcggacg ccgtagcgcg gctcaagaag gcgtgagcgc
      961 cgcgtcaggg tcgcacgaaa taaaagtgtc cgcgcggagg ggccgggggg ggggacagcc
     1021 tcgctccacg cggactagtt ataattagca gcgctcgatc gcgaatgcaa cggaagtaag
     1081 ttcagcagaa tgtaagttcg gcgggtgatt gagctcggcg agcccgaggg gtcgcgctcg
     1141 gttctgcaat cacgtgccgc aaattatgct tcagtcgcgg caccggtagg ctttgcgtga
     1201 gccgtcgggg gcgtcgagca cgagtggggc gccgggcccc gcgtcccgcg cagggatgcc
     1261 acggacactt acgtccatgg cgtcgtcacc ccggggcagt gcgcttggcg cgcggacgag
     1321 gccggcgctg tctgcggcgg cgcgatcttt gtgggctgac tttcgatggg cgcgggcgcg
     1381 ctcgtcgccc ggcgcgccga gcggggccgc aagaacatcc atgcagatgc ggctcggcga
     1441 cacgatcacg cgggcctcga taccgttccc cgtcgcgacg ctcgggctgt tcaaatcgac
     1501 gttcggctcg agcgcgagcg cgtcactcac gacgtagccg tcttcccccg tcgtgcacgg
     1561 cgcgggcatg gccgaaacgt cgctcgcgcg ttcgacgatc ggcgcgtcga aacggcgatt
     1621 cgagagatcg aagggaaaaa ggtaatagtc cgcgtcgtgg agccacacgc cgaagctctc
     1681 gccgcgcgcg gcgggcgcga gcgcgggcgg ctccgaatgt ccggcgactt cgggaaactc
     1741 gccgaggagc tcgagctcac cttgttcgac gcgatagagc ctgagcgcac gggcctcgcc
     1801 gagcgcagca acgtaaaagc gcccgcccgc gaaggcggcg ctcgcgatca cgccggtcgt
     1861 acccgccgtt ttgacgcgtg cgatgcggct gccctcctcg agcaggtaaa tctcgaccat
     1921 gccgcggatg ctcacgagca agagccctgc gtgccgcagc ggatcagtca cgacgcgcca
     1981 gctcgccggc ggtccactcg gcgaacgccc gaatgcgtcc gtcgcgagca ccgcgctcga
     2041 ccacgcgacg ggcgacggag ccgtcgacca gacggcgtcg ctcacgcgat agggatcacg
     2101 cacccgcacg agccaacgcg cttgccggga ccagccgtcg cccggagggc cccacgcgta
     2161 agcgtgaaag agtcgcaggt ccgcttcgtt gctcgtctcg atgccgagat cggagcgcgc
     2221 gcggacgggt ggcggcacct cggccagcgg atcccacgga ctgacggagc gatcgtcgtt
     2281 tgccgggctc tggtggagag cgggcttgct agcctcaccg gtcgcttcgc actcgagtga
     2341 ccagcggttg ccgcctgaac cgggcaagtg cgtgggctcg ggcaccgtcg cgagggtgag
     2401 acgatccctt tcgcccatct tccagccgac gcgcagccag ccggaaaccg cgcaaccgag
     2461 cggcgtgcag ccgctcgtcg tgcccgaagt tttgagcggg cggagatcgg gctcgccggg
     2521 gagctcgccg tcgctccact cgaaaccacc gtccaccgtt tcacgcaagc cgccgctgtg
     2581 accgacgacc aagccgaagc gaccgcgcag gagcgcgcga tcgaggtgcg gctcgggcgc
     2641 gcccacgagc acggtcccgt cgagtttcac ccgcaccccg acgaagccgt cgttgccagc
     2701 gacccacccg ctgagctcgg cggtcggcgc ttgctcgaac gagtcgagcc agaaaccgcg
     2761 ttcgacgatc gctcgcgccg cttcgtcgtc cacgcccgac agcttgagcg gcaaggcgcg
     2821 atcggctgtg ccggggtgaa cgagcgtgag cacgccgagc gtcgtgtcgg cgggcttcgc
     2881 ctgcttggag gcggcgtccg tcttctcagg cgccttttcg cgcttggcca cgggtgcgag
     2941 cag
//
LOCUS       DATIML010000720         3201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3615943, whole genome shotgun sequence.
ACCESSION   DATIML010000720 DATIML010000000
VERSION     DATIML010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3201
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3615943"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1091
                     /locus_tag="VLJ38_12405"
     CDS             <1..1091
                     /locus_tag="VLJ38_12405"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HSU40369.1"
                     /translation="MVLDHARDFWMGFRVRPTDLAHTTPVLFATRFVTHFCAPVFVLL
                     AGTAAYLYGRTRTPSERTRFLLSRGLFLVLLELTVIRMMWVPDPFYHFTVLQVIWAIG
                     WSLVVLAALAYAPPAVVFGVGAMLVLGHNLLDGVHAREFGAFAPLWNVVHERAALKPW
                     PGRTFFVSYPLVPWIGVMALGYAFGRVVERPLAWRRSFCLKLGLALTLGFFALRAVNH
                     YGDPVPWSTQRSPVFTLLSFFNVEKYPPSLDYLLVTLGLALVLFAFAPELAARSRFLV
                     NFGRVPLLFYVAHLFLLRYASIPVAVLRFGTTAALAPPPKGTGGSPEFPLIVTYLVWI
                     VALLALYPLCRWYARLKATKKAVWMSYL"
     gene            1088..1684
                     /gene="udk"
                     /locus_tag="VLJ38_12410"
                     /pseudo
     CDS             1088..1684
                     /gene="udk"
                     /locus_tag="VLJ38_12410"
                     /inference="COORDINATES: protein motif:HMM:NF004018.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004849 - uridine kinase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
     gene            complement(1801..2457)
                     /locus_tag="VLJ38_12415"
     CDS             complement(1801..2457)
                     /locus_tag="VLJ38_12415"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSU40370.1"
                     /translation="MPRLGALFDMDRTLVRKDTAGLYTRYRRDRGEVTLRDALRVSWW
                     MVQYTLGVIDAPRVALQALEHFRGTEERALIESCEGWFKDYVLPHVQPAGRAAVERHR
                     ERGDLVAIVTGATKYVAQPLALELGIEEVVCTELELDAEGRFTGRPIEPLCYGAGKLE
                     LARRLAERQGFELAEATFYSDSITDLPLLEAVRHPRIINPDARLRRLARQRGWPIEQW
                     "
     gene            2538..>3201
                     /locus_tag="VLJ38_12420"
     CDS             2538..>3201
                     /locus_tag="VLJ38_12420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU40371.1"
                     /translation="MPAPSLTSLPIDAVIGEIVARVAAEHALVLEAPPGAGKTTRVPW
                     ALHAAGDGRGEVIVTEPRRLAARMAARRVASERSLKLGETVGYSVRFEDVAGPHTRVR
                     YVTEGVLVRRLLDDPELRGVRAVVLDEFHERHLESDLLLALLARLRQRTRPDLDLVVM
                     SATLDAEPVANFLGAPRLRSEGRAFPVTIEHLPALDERPLEKQVTSAVRRVLDEQSTG
                     HVL"
BASE COUNT          439 a         1172 c         1017 g          573 t
ORIGIN      
        1 tcatggtgct cgaccacgcg cgcgactttt ggatgggctt ccgggtgcgc ccgaccgatc
       61 tcgcacacac gacgcccgtc ctgttcgcga cgcgcttcgt cacgcatttc tgcgcgcccg
      121 tcttcgtgct gctcgcgggc acggccgcct atctgtacgg ccggacgcgc acgcccagcg
      181 agcgcacgcg cttcttgctg tcgcgtggcc tgttcctcgt cctgctcgag ctcacggtga
      241 ttcggatgat gtgggtgccg gatccttttt accatttcac cgtgctgcag gtgatctggg
      301 ccattggttg gtcactcgtc gtgctcgcgg cgctcgccta cgcgccgccc gcggtcgtct
      361 tcggcgtcgg cgccatgctc gtcctcggcc acaacctgct cgacggggtc cacgcgcgcg
      421 agttcggcgc gttcgctccg ctctggaacg tcgtgcacga gcgcgcagcg ctcaagccgt
      481 ggcccggccg cacgttcttc gtctcgtatc cgctcgtgcc ctggatcggg gtgatggcgc
      541 tcggctacgc cttcggtcgt gtcgtcgagc ggccgctcgc gtggcggcgc agcttctgcc
      601 tgaagctcgg tctcgcgctc acgctcgggt tcttcgcgct gcgcgccgtg aaccattacg
      661 gcgatcccgt gccgtggagc acgcagcggt cgcccgtctt cacgctgctc tcgttcttca
      721 acgtggagaa atacccgccg tcgctcgatt acctgctcgt gacgctcggc ctcgcgctcg
      781 tgctcttcgc tttcgcgccc gagctcgcgg cccgctcgcg tttcctcgtg aatttcggca
      841 gggtgccgct gctcttttac gtcgcgcacc tgtttctgct gcgttacgcg tcgattcccg
      901 tcgccgtgct gcggtttggc accacggccg ccttggctcc gccgcccaag gggaccggcg
      961 gaagccccga attcccgctc attgtcacgt acctggtctg gatcgtcgcg ctcctcgccc
     1021 tgtacccgct ctgtcgctgg tacgctcgcc tgaaggccac aaagaaggcc gtctggatga
     1081 gctacctttg aagcgaaatt cactcctcat cggcatcgcc ggcggcaccg gcagcggcaa
     1141 gacgaccctc gctcaacgca tcgaggccgc gctgccaagc gacgtcacgg tcctcgagca
     1201 ggacagctac taccgcgacc gctcgcacct cgcgcccgcc gagcgcgcga tggtcaacta
     1261 cgacgagccg gcggcgctcg aaaacgatct gctcgccgcc cacctccagg cgctccgcga
     1321 cggccaagcc gtcgagacac ccgagtacga tttttcgacg cacacgcgcc gccgagcgac
     1381 gcgccgcgtc gcgccctcac ccatcgtcgt cgtcgaaggc atcctgctct tcgccgtgcg
     1441 cgagctgcgt gaggtcttcg atctgcgcat cttcgtcgac accgacgacg acattcgcct
     1501 catgcgccgc atccgccgcg acatcgtcga tcgcggccgc gacatcgcgg acatcgagcg
     1561 ccagtaccac gacagcgtgc gaccgatgca cctcttgcac gtcgcgccga gcaagcgctt
     1621 cgcccacctg atcgtgcccg aaggcggcga aaacgccgaa gcgctcgacg tcatcgtcgg
     1681 ccgcctgcgc tactgtgctc gacgccacgc cgagttcctg agcgattgtt ttttgcggcg
     1741 accgctgcgc ggcagggtcg aacggccgtc gctcgcgccg ttccaccgct cggctcgcgc
     1801 tcaccactgc tcgattggcc agccgcgctg gcgcgcgagg cggcggagcc gcgcgtccgg
     1861 attgatgatg cgcgggtggc gcacggcttc gagcagcggc aaatcggtga tgctgtcgct
     1921 gtagaacgtc gcttccgcaa gctcgaagcc ctgccgttcg gccagccttc gcgcgagttc
     1981 gagcttgccc gcgccgtagc agagcggctc gatgggccgt cccgtgaagc ggccctcggc
     2041 gtcgagctcg agctccgtgc acaccacctc ttcgatgccg agctcgagcg cgagcggctg
     2101 cgcgacgtat ttagtggcgc ccgtgacgat ggcgacgaga tcgcctcgtt cgcggtgtcg
     2161 ctccaccgcg gcacgtcccg caggctgcac gtgcggcagc acgtagtctt tgaaccagcc
     2221 ttcgcacgac tcgatgagcg cgcgctcctc ggtgccgcga aagtgctcga gcgcctgcag
     2281 cgcaacgcgc ggcgcgtcga tgacgccgag cgtgtactgc accatccacc agctgacgcg
     2341 cagcgcgtcg cgcagcgtga cttctcctcg atcgcgccgg taacgcgtgt aaagtcccgc
     2401 ggtgtctttt ctgaccagcg tccgatccat gtcgaacagg gcgccaagcc ggggcatacc
     2461 cgcccatgtt agtaccactg tcgtaaattc gcattttcct ggataccgcg agcgcgcagg
     2521 ccggccgagc tagtccgatg cccgcccctt cgctcacttc gctgccgatc gacgccgtga
     2581 tcggggaaat cgtcgcgcgt gtcgcggccg aacacgccct cgtgctcgag gcgccgccgg
     2641 gagcgggcaa gaccacgcgc gtgccctggg cgctccatgc cgcgggcgac ggccgggggg
     2701 aagtcatcgt gacggagccg cgccggctcg ccgcgcgcat ggcggcgcgc cgcgtcgcga
     2761 gcgaacgctc gctgaagcta ggcgagaccg tcggctacag cgtgcgcttc gaggacgtcg
     2821 cgggaccgca cacgcgcgtg cgctacgtga ccgaaggcgt gctcgtgcgg cgcctactcg
     2881 acgatcccga gctccggggc gtccgcgccg tcgtgctcga cgagtttcac gaacgccacc
     2941 tcgagagcga tctgttgctc gcgttactgg cgcgcctgcg ccagcgcacg cgccccgacc
     3001 tcgacttggt cgtgatgagc gcgacgctcg acgccgaacc cgtcgcgaac ttcctcggcg
     3061 cgccgcgcct gcgcagcgaa ggccgcgctt ttcccgtcac gatcgagcac ctgcccgcgc
     3121 tcgacgagcg gccgctcgaa aagcaagtaa cgagcgccgt ccggcgcgtg ctcgacgagc
     3181 aaagcacggg gcacgtcttg g
//
LOCUS       DATIML010000721         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3325803, whole genome shotgun sequence.
ACCESSION   DATIML010000721 DATIML010000000
VERSION     DATIML010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3325803"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..1218)
                     /locus_tag="VLJ38_12425"
     CDS             complement(70..1218)
                     /locus_tag="VLJ38_12425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40372.1"
                     /translation="MLNSHHSRSLRFSRRLGAPRAATLASLAAIALAFGCATDPVDET
                     PDASGTTNTESGTLHATIGPEGGELVGAPGSPLAGVRLAVPAGALAAKTELTLRAVDE
                     GTPLPKTAVRCGPNFSIEPAGLALALPASLTLPFDEDAITTQYRFDDEVKVWDLQQGT
                     WGQRIQTDSSEGSVTIELEALSGDVAAGVNPPSSDDIVSFDFAPNPKFLPCLAAYPDD
                     PTRAPSVHAVVVRGDLNDGLFLRGSYVKPGLKFDMFSVENGSLDANGAPLANFSNFGL
                     AWYQSDLEADKHGEMRASIRTILLDQIFGFDPGVNLPPTGTFEVGFWFNNPDDAVSCG
                     FDASKPTPFNGEHKAGPLAMITLPDAETGLGPLCTQPDTSVSPARCDP"
     gene            complement(1474..>1829)
                     /locus_tag="VLJ38_12430"
     CDS             complement(1474..>1829)
                     /locus_tag="VLJ38_12430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40373.1"
                     /translation="AYTTHTRELRSVLWCALTESTGDRLELTPGVARALGRGEDAVAK
                     RLSPMPTVTVSTSQSSGTEPPRALYDTATREQIEASLAKHEGNVASAAEELGFKNRYV
                     LYRLMKKLAIAGGES"
BASE COUNT          269 a          588 c          659 g          313 t
ORIGIN      
        1 ggcgaacccc gcgggttcac ggtgtcgtgc cgtgagcccg cgcggctcgc tgcccaatcc
       61 gagctcggct cagggatcgc agcgcgccgg actcactgag gtatcgggct gcgtgcagag
      121 cggtccgagc ccggtctcgg cgtccggtag cgtgatcatc gcgagtgggc cggccttgtg
      181 ctcgccgttg aacggcgtcg gcttgctcgc gtcgaagccg cagctgacgg cgtcgtccgg
      241 attgttgaac cagaagccga cctcgaacgt acccgtgggc ggcaggttga cgcccggatc
      301 gaagccgaag atctggtcga gcaagatcgt ccggatcgag gcgcgcatct cgccgtgctt
      361 gtcggcttcg aggtcgctct gataccaggc gagcccgaaa ttcgagaagt ttgcgagagg
      421 ggcgccgttc gcgtccagcg agccgttctc gaccgagaac atgtcgaact tgaggcccgg
      481 tttgacgtag ctgccgcgca ggaacaagcc gtcgttcaga tccccgcgca cgaccacggc
      541 gtgcacgctc ggcgcgcgcg tcgggtcatc ggggtacgcc gcgaggcagg gcaaaaattt
      601 cggattcggc gcgaaatcga aggacacgat gtcgtcggac gacggtggat tgacgccggc
      661 cgccacgtcg ccgctcagcg cctcgagctc gatcgtgacc gagccttcgc tgctgtcggt
      721 ctggatgcgc tggccccagg tgccttgctg caagtcccaa actttcacct cgtcgtcgaa
      781 gcggtactgg gtcgtgatcg cgtcctcgtc gaacggcaac gtgagtgaag ccggtagcgc
      841 gagcgcgagc ccggcgggtt cgatcgagaa gttgggtccg caacgcacgg cggttttcgg
      901 cagcggcgtg ccttcgtcga ccgcgcgcag cgtgagctcc gtcttcgccg cgagcgcccc
      961 ggcggggact gcgagacgta cgcccgcgag cggtgagccc ggtgcaccca cgagctcgcc
     1021 gccttcgggg ccgatggtgg cgtggagcgt gccggactcc gtgttggtgg ttccgcttgc
     1081 gtccggtgtc tcatcgaccg ggtccgtagc gcaaccgaac gcgagcgcga tggcggccag
     1141 cgacgcgagc gtcgccgcac gcggagcacc gagacgacga ctgaagcgga gagaacgaga
     1201 gtgatgcgaa ttgagcatgt gggaactcct cgagttcggg cgcgggctcg aacgactcgg
     1261 ccgcgccgac ggagtgccct tcagcaaccg tcgtgccggc gtgggcggcg cttcccgaag
     1321 cgctcgggtc caggatcggc ctgtcgcgaa tatctgaatg aaaccgctgg attgaagccg
     1381 tcgccgctcg tcgtgccgcg gccgcgaatc cttcgtgcgc ggctcgtgcg cgcacgcttt
     1441 cgttcgtgcg cgcaccgctg cgcccggaac cgttcagctt tcgccgccgg cgatagcgag
     1501 cttcttcatc aagcgataga gcacgtagcg attcttgaag ccgagctcct cggccgcgct
     1561 cgcgacgttg ccctcgtgct tggcgaggga ggcctcgatt tgctcgcgcg tcgcggtgtc
     1621 gtagagggcg cgcggcggct cggtgcccga gctctggctg gtgctgacgg tgacggtcgg
     1681 catcggcgag agtcgcttgg cgacggcgtc ctcgccgcgc ccgagcgcac gagcgacgcc
     1741 gggcgtgagc tcgagtcggt ccccggtgct ctcggtgagc gcgcaccaga gtacgctgcg
     1801 aagctcgcgc gtgtgcgtcg tgtacgcgt
//
LOCUS       DATIML010000722         5614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1597904, whole genome shotgun sequence.
ACCESSION   DATIML010000722 DATIML010000000
VERSION     DATIML010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5614
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1597904"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1083)
                     /locus_tag="VLJ38_12435"
     CDS             complement(<1..1083)
                     /locus_tag="VLJ38_12435"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HSU40374.1"
                     /translation="MEERIAVIGLGYVGLPIALAFARRFPGTIGFDLNPQRVDALRRG
                     IDNTNEVDGSALKQTTLEVTTDDKALERANFFVVAVPTPIDGDHRPDLTPVLGASETV
                     GKRMKAGSVVVYESTVYPGVTEDICGPVLEKTSGLKRSRDFKLGYSPERINPGDREHS
                     FEKIVKVVSGEDPETLDRVARVYETVVDAGCYRAPSIRVAEAAKAVENVQRDLNIALM
                     NELSLICDRIGIRTRDVLNAAGTKWNFLRFEPGLVGGHCIGVDPYYLTTLAESVGYHP
                     QVILAGRRINDGMGKYVAEQTVKHMIQAGFPVKSAKINVLGLTFKENCPDLRNSRVID
                     VVQELRSYGADVYVHDPVADVAEAMHE"
     gene            complement(1267..2631)
                     /locus_tag="VLJ38_12440"
     CDS             complement(1267..2631)
                     /locus_tag="VLJ38_12440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40375.1"
                     /translation="MPARRVGVGSSSFSAVGAALVLALLSARSSAAPPKLQAVGETSV
                     GVTDNATSAPDEPLAGGASKSPGAFIVLRPGLIFGLLSPRTVQRLSYTFDYDLYLTRS
                     ATNSSSNRLDYRAFFDLSSGLSAIVGGAATISDSYASLTFAPAAGGALPFLPGASTRL
                     FQGSADEMISDDFAVGWRGWESAGVVYATPITGTAPETLSPNLRLGTEYSWLGNAAGA
                     ELRTDYTVVHDGVLADGTQVPLQRQLVTRAVALYRRDIGRYFSTRFEAGAARVDWLET
                     HKNYYYPTGSATLGYADTFGDATLTYAHSITTNVLMGQQYLSDEVRLRGAIPLDQKSI
                     FSLAASAGYQTGRLLDENARLATHVSLLLTDVTFGWQTTPWLLLGVRAQHIDQRSDVR
                     VPTLPVSFVQNSIMLGASAKFPPDPDMPAAYRSPRRVDRTDELRTATVPDGQAIAAPT
                     GRSR"
     gene            complement(2636..4009)
                     /locus_tag="VLJ38_12445"
     CDS             complement(2636..4009)
                     /locus_tag="VLJ38_12445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40376.1"
                     /translation="MLDLYGFLFQRVLYPGLQSGIKRRPTLDHLHELERTQWCSLDEL
                     HVIQERELKRLLAHVFENVPYARQKYAAAGIGLEDIQRLDDLVKLPLLTRDEAREHAA
                     ARRSVAPPFAAIDKSTSGTTGRPLTFAYDRGSEYWRQATKFRGYGWAGYQLGDRAIHF
                     WGSPSLRPPPLARRLKESLDHSFRREHYVDCTERSEPALERTVARIRRVKPRVMVCYA
                     QAAAALARHVNAKGLRDWADINVICAAERVWPSDRAAMIQAFGPGVFETYGNREVMLI
                     AAECEAHAGLHLSMENLIVEIIVRDGDRQRPAAPGELGEVAITDLHNYGAPFVRYLTG
                     DLAVAHPAERCACGRWLSRLASIEGRSTETLYDGAGNPVSGMFFSVLFAYLADKVREF
                     QVVQRRDKAIDLRLVPTGELDQALVDSILQHLRKYLPGVPVRAEVVRELLPDRSGKLR
                     VVVVEKN"
     gene            complement(4003..5097)
                     /locus_tag="VLJ38_12450"
     CDS             complement(4003..5097)
                     /locus_tag="VLJ38_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40377.1"
                     /translation="MAFHRNVHRWLAGYAEQLWRTKHEPPVSGPRHVLFALCDHYEPL
                     WGDADDARGRERVERWARTYGETLGEFRDADGRPPRHSFFFPGEQYQPYFLDALGTLA
                     RKGFGEVEFHLHHDGDDAAKLTHDLGRYIASYAEHGHLTRAPDGRPRYAFIHGNWCLA
                     NCRPDGRYCGLDSELAVLFETGCYADFTFPSAPDSTQPNIVNQIYWPTGDPRSARAHE
                     HGERARVGTVMRDRILMIQGPLALARRRLRVRIESSALTARDPGTPDRIATWIAQDIH
                     VEGRPEWTFVKVHTHGAPEAQAGALLGEPGRALHRELTSRYNDGQKYVLHYVTAREMF
                     NIALAGMQGKSGDPNLFRDYALPPPPIAAC"
     gene            complement(5109..>5614)
                     /locus_tag="VLJ38_12455"
     CDS             complement(5109..>5614)
                     /locus_tag="VLJ38_12455"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40378.1"
                     /translation="TSAERGEGKTTCAANLGLALADETLARVLLIDANLRRPSLAQAF
                     GFEPSDSFIERLAMNRDVTPPYRVAAVRGTRLHVAALPQQRPRSGHIDRLLFTAALHD
                     LKSEYDYIVIDAAGVFESADADVAGECADGVLLTARAGSSHRGAIESAIEQLHPTRVF
                     GTVLLDS"
BASE COUNT          916 a         1768 c         1985 g          945 t
ORIGIN      
        1 ttcgtgcatc gcctcggcca cgtcggccac cggatcgtgc acgtagacat cggcaccgta
       61 ggaccgcagc tcctggacga catcgatgac gcgggagttg cgaaggtcgg ggcagttctc
      121 cttgaacgtg aggccgagca cgttgatctt cgcggatttg accgggaatc cggcctggat
      181 catgtgcttg accgtttgct cggccacgta cttgcccatg ccgtcgttga tcctgcgccc
      241 ggcgagaatc acctgcgggt gataacccac ggactcggcg agcgtcgtca gataataagg
      301 atccacgccg atgcagtggc cgcccacgag tcccggctcg aaacgcaaga agttccactt
      361 cgtgccggcg gcgttcagca cgtcgcgcgt gcggatgccg atgcggtcgc aaatgagcga
      421 gagctcgttc atgagcgcga tgttcagatc gcgctgcacg ttctcgacgg ccttggccgc
      481 ttcggcgacg cgaatcgacg gcgcgcgata gcagcctgca tcgaccacgg tctcgtagac
      541 gcgcgcgacc cggtcgagcg tctccggatc ttcgcccgag acgaccttca cgatcttctc
      601 gaacgagtgc tcgcggtcac cgggattgat gcgctcgggt gaatagccga gcttgaagtc
      661 gcgactacgc ttgaggccgc tcgtcttttc cagcaccggc ccgcagatgt cttccgtcac
      721 gccgggataa accgtcgact cgtaaacgac gacgctgccg gccttcatgc gcttgccgac
      781 ggtctcgctc gcgccgagca cgggcgtgag atcggggcgg tggtcgccgt cgatgggtgt
      841 cggtactgca acgacgaaga aattcgcgcg ttcgagcgct ttgtcgtcgg tcgtgacctc
      901 gagtgtcgtc tgtttgagag cggagccatc gacttcgttg gtgttgtcga tgccgcggcg
      961 caaagcgtcc actcgttgcg gattgagatc gaagccgatg gtgccgggaa agcgacgtgc
     1021 aaaagccaat gcgatcggca atccgacgta gccgagcccg atgacggcaa tgcgttcttc
     1081 catggcggcg actacttgca aaacgtgggc cgtgttgggc atgtttcggc gccgggcgtt
     1141 tcggccgcgt gctacgcggg ccctcgtcca tctcgccacg gtgagatccc aagtcacgcg
     1201 cggcgcgtcg cctggtgtcg cactcgttcg gcggagtcgc gcttacgtct gccgtgacga
     1261 gctttgctag cgactgcggc ccgtgggggc cgcgatggcc tggccatcag gcactgtcgc
     1321 ggttctgagt tcgtccgtgc ggtcgacgcg tcggggtgag cggtacgccg cgggcatgtc
     1381 cggatcgggc ggaaatttcg cggaggcgcc gagcatgatg ctattttgga cgaaactcac
     1441 gggcagggtg ggcacgcgga cgtccgaacg ctgatcgatg tgttgagcgc ggacgccgag
     1501 caggagccag ggggtcgttt gccagccgaa cgtcacgtcc gtgaggagaa gcgagacgtg
     1561 cgtcgcaaga cgggcgtttt cgtccaatag ccgccccgtt tggtaacccg cggaggcggc
     1621 gagcgagaag atggatttct gatcgagcgg gatagctccg cggaggcgca cttcgtcgga
     1681 gaggtactgt tggcccatga ggacgttggt cgtgatggag tgcgcgtagg tgagggtcgc
     1741 gtcgccgaac gtgtcggcgt agccgagcgt cgccgaacct gtcgggtagt aatagttctt
     1801 gtgggtctcg agccaatcga cccgggcggc gccggcctcg aagcgcgtcg aaaaataacg
     1861 gccaatgtcg cggcgataga gcgcgacggc gcgcgtgacg agttggcgct ggagcggcac
     1921 ttgggttccg tccgcgagga caccgtcgtg cacgacggtg tagtcggtgc gcagctcggc
     1981 gccggcggcg ttaccgagcc agctgtattc ggtgccgagc cgcaggttcg gtgacagcgt
     2041 ctcgggcgcc gtaccggtga tgggggtcgc gtagacgacg cctgcgctct cccagccacg
     2101 ccagcccacg gcgaagtcgt cgctgatcat ttcatcggcg ctaccctgaa acagccgggt
     2161 gctcgcgccg ggcaagaacg gcaaggcgcc cccggccgct ggcgcgaacg tgagcgacgc
     2221 ataactgtcg gagatggtcg ccgcgccgcc gacgatcgcg ctcaggcccg acgaaagatc
     2281 gaagaaagct cgataatcca gccgattgga cgagctgttc gtcgccgaac gcgtgaggta
     2341 gaggtcgtag tcgaacgtgt acgagagtcg ctgcaccgtg cgcggcgaca gcaggccgaa
     2401 gatgagtcca ggccgaagta cgatgaatgc cccagggctt ttcgaggcgc cgcccgcgag
     2461 cggctcgtcg ggcgccgagg tcgcgttgtc cgtgacaccg acggacgtct ccccgacggc
     2521 ttggagcttc ggcggtgcgg cgctgctccg agcggatagg agcgcgagca cgagcgcggc
     2581 gcccacggcg ctgaagctcg agcttccgac tccgacgcgc cgcgctggca tcggctcagt
     2641 ttttctcgac gactacgacg cgcagcttgc cgctccgatc gggcaatagc tcccgcacga
     2701 cttcggcacg caccggcaca cccggcaagt acttgcgcag gtgctgcagg atcgagtcga
     2761 ccagcgcctg atcgagctcg cccgtgggca ccaagcgcag atcgatggct ttgtcgcggc
     2821 gctgcacgac ctgaaattca cgcaccttgt cggccaaata ggcgaagagc acgctgaaga
     2881 acatgccgct caccgggttg ccggcgccgt cgtacaacgt ttccgtcgag cggccctcga
     2941 tgctcgcgag ccgcgagagc cagcgcccgc acgcgcaacg ctcggccggg tgcgcgaccg
     3001 ccaggtcgcc cgtcaagtaa cgcacgaagg gtgcgccgta gttgtgcaaa tccgtgatcg
     3061 cgacttcgcc gagctcgccc ggcgcggcgg gccgctgccg gtccccgtcg cgcacgatga
     3121 tttcgacgat gaggttctcc atcgaaaggt gcagcccggc gtgtgcctcg cactcggcgg
     3181 cgatcagcat cacttcgcgg ttaccgtagg tctcgaatac gcccggcccg aacgcttgga
     3241 tcatcgccgc gcgatcgctc ggccacacgc gctcggccgc gcaaatgacg ttgatgtccg
     3301 cccagtcgcg cagacccttg gcgttgacgt gccgcgcgag cgcggcggcg gcctgcgcgt
     3361 aacagaccat cacgcgcggc ttcacgcgcc ggatgcgcgc gaccgtgcgc tcgagcgccg
     3421 gctccgaacg ctccgtgcag tcgacgtagt gctcgcgccg gaaggagtgg tcgagcgact
     3481 ctttgagccg gcgcgcgagc ggtggcggtc tgagcgaggg cgagccccag aagtgaatcg
     3541 cccgatcgcc gagctggtag ccggcccagc cgtagccgcg aaacttcgtc gcctggcgcc
     3601 aatattccga gccgcgatcg taggcgaagg tgagcgggcg gcccgtcgta ccgctcgtcg
     3661 acttgtcgat cgcggcgaag ggcggcgcca cggagcgccg cgccgcagcg tgctccctcg
     3721 cttcgtcgcg cgtgagcagc ggaagcttga cgagatcgtc gagccgctgg atgtcttcga
     3781 ggccgatgcc ggcggccgcg tacttctggc gcgcgtatgg cacgttttcg aacacgtgag
     3841 caagcaagcg tttgagctcg cgctcctgaa tcacgtggag ctcgtcgagc gagcaccact
     3901 gcgtgcgctc gagctcgtgt aaatgatcga gcgtcggacg ccgtttgatt ccgctctgca
     3961 ggcccgggta gagcacgcgc tgaaacagaa aaccgtagag gtctaacatg cggctatcgg
     4021 gggtggaggg agggcgtagt cgcggaagag attcgggtcg ccggatttgc cctgcatgcc
     4081 ggcgagcgcg atgttgaaca tctcgcgcgc cgtcacgtag tgaaggacgt acttctggcc
     4141 gtcgttgtac ctcgacgtga gctcgcggtg aagcgcgcgc ccgggctcgc cgagcagcgc
     4201 gcccgcctgc gcctccggag cgccgtgcgt gtggaccttc acgaacgtcc attcgggccg
     4261 cccctcgacg tgaatgtctt gcgcgatcca ggtcgcgatg cgatcgggcg ttccgggatc
     4321 gcgcgccgtg agcgccgagc tctcgatgcg cacacggagc cttcggcgcg cgagggccaa
     4381 gggtccttga atcatcagga tgcgatcgcg catcacggtg ccgacccggg cgcgctcgcc
     4441 gtgttcgtga gcgcgcgcgc tccgcggatc gcccgtgggc caataaatct gattgacgat
     4501 gttcggttgc gtcgagtcgg gggccgacgg gaaggtgaag tccgcgtaac aaccggtctc
     4561 gaacaggacc gcgagctcgg agtccaggcc gcagtagcgg ccgtcggggc ggcaattggc
     4621 gaggcaccaa ttgccgtgaa tgaacgcgta gcgcggccgg ccgtcgggag cgcgcgtcaa
     4681 atggccgtgc tcggcgtagc ttgcgatata gcggccgaga tcgtgcgtga gtttcgcggc
     4741 gtcgtcgccg tcgtggtgca ggtggaactc gacctctccg aagcccttgc gcgcgagcgt
     4801 gccgagcgcg tcgaggaagt acggttggta ctgctcgccc ggaaagaaga aggagtggcg
     4861 cggggggcgg ccgtcggcgt cgcggaactc gccgagcgtc tcgccgtacg tgcgcgccca
     4921 gcgctcgacg cgctcgcggc cgcgcgcgtc gtcggcgtcg ccccagagcg gctcgtaatg
     4981 atcacacagc gcgaacagga cgtgacgcgg cccgctcacg ggcggctcgt gcttggtgcg
     5041 ccagagctgc tcggcgtagc cggcgagcca gcggtggaca ttgcgatgga aagccatgca
     5101 aggttcgctc aggagtcgag gagcaccgtg ccgaagacgc gcgtcgggtg cagctgctcg
     5161 atggcggact cgatggcgcc gcggtgggac gagccggcgc gcgcggtgag gagcacgccg
     5221 tcggcgcatt cgcccgcgac gtcggcgtcg gcgctctcga acacgcccgc cgcgtcgatc
     5281 acgatgtaat cgtactcgct cttgagatcg tgcagcgccg cggtgaaaag cagccggtcg
     5341 atgtggcccg aacgcggccg ttgctgcggc agcgccgcga cgtgcaagcg cgtgccgcgg
     5401 acggcggcga cgcgatacgg cggcgtcacg tcacggttca tggcgagccg ctcgatgaag
     5461 ctgtccgatg gctcgaagcc gaatgcttgc gccagcgaag gacgccgcag attcgcgtcg
     5521 atcaagagca cgcgggcgag cgtctcatcg gcgagcgcga gccccaggtt cgcggcgcag
     5581 gtcgtcttgc cttcgccgcg ctccgcgctc gtga
//
LOCUS       DATIML010000723         2703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2749206, whole genome shotgun sequence.
ACCESSION   DATIML010000723 DATIML010000000
VERSION     DATIML010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2749206"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="VLJ38_12460"
     CDS             <1..588
                     /locus_tag="VLJ38_12460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40379.1"
                     /translation="GKDGAHLVAAPDARHSVPLRTGSDVEAFGLKNPSAHADPTWFGA
                     RLRPASEWARVRLLVRQTARVPVVALSDGTGFRNSLLAGFDDAEYPAEFLVAYLNSTP
                     VRWLHHARHRDARQGMPQLKIAHLRATPAPPSLELKRTLAALGKELSLRGRGIRASEQ
                     AELDELVADSFDLTQKERERLRDFRSSVADARPRD"
     gene            606..1511
                     /locus_tag="VLJ38_12465"
     CDS             606..1511
                     /locus_tag="VLJ38_12465"
                     /inference="COORDINATES: protein motif:HMM:NF015376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HSU40380.1"
                     /translation="MSGLVHLKTWGRRVLPAACVLAALLVGGKAALSRASIEPPQPVP
                     APRPSARSAPPAPPGPSHVALEPLDVRPTPNPLRGLSPAELDRLALTKPSSLGSICVG
                     RPNRGQLWNSVELASAPGLHVMVQHDTSFGTDATVRTIRAAVAEFRTSYPNAPDLAVG
                     DLSHAHGGYLRPHHSHQLGLDADLGYFYREGGKWYAKATAENLDRELTWAFLKALIAQ
                     GSTEYIFMDRSVQGLLRAYALAQGEDATWLDTLFESPAHRDTLIRHAYGHITHFHVRF
                     LDPAAERTGRLLAARLAPRRRFARH"
     gene            complement(1579..>2703)
                     /locus_tag="VLJ38_12470"
     CDS             complement(1579..>2703)
                     /locus_tag="VLJ38_12470"
                     /inference="COORDINATES: protein motif:HMM:NF045039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40381.1"
                     /translation="ALAVSCAQLPDTGLKRRAGSGGAETAGAAGVVPNGAAGTSTTQA
                     RTGGSAGSGGYGAGGLAATAGSANARAGAAGSAANTGAGGAKGGAGAKAGGGRSSGAG
                     GAPAQASGAPDAGAPDAGAANGGGSAGFSTNRGDFFGESRCKNAGFALCEDFESGSLD
                     TGTWKSRGAAPTIETVRAARGTHSAHFHTTDNGLSYITQTKTFPAPNDTYYARVFVWF
                     EALPTAPAWAHWTISGAQAGTAQDAPEIRVGGQWDSNHDLALFGVGSDRGDTGDWTNL
                     DADPAGKPKAVPAQAWVCLEWMFDGSANQTKFWWDGVEHPSLATSSTNHGGTSDAFVL
                     PQFDAMWIGWWLYQANTDPPAFDVWFDEVAVDYARIGCNR"
BASE COUNT          381 a         1035 c          857 g          430 t
ORIGIN      
        1 ggcaaagacg gcgcgcacct cgtcgccgcg cccgacgcgc gccacagcgt gcccctccgc
       61 acgggcagcg acgtcgaagc gttcggccta aaaaacccct ctgcccacgc cgatcccacg
      121 tggttcggcg cgcgcctgcg ccccgcgagc gaatgggcgc gcgtgcgttt gctcgtgcgg
      181 cagaccgcgc gcgtccccgt cgtggcgctc tcggacggca cgggttttcg caattcactg
      241 ctcgccggct tcgacgacgc cgagtacccc gctgaatttc tcgtcgcgta cttgaattcc
      301 acgcccgtgc gctggctgca ccacgcgcgt caccgcgacg cgcgccaggg catgccgcag
      361 ctcaaaatcg cgcatttgcg cgccacaccc gccccgccat cgctggagct caaacgaacg
      421 ctcgcggccc tgggcaaaga gctttcgctg cgcggccgcg gcatccgcgc gagcgagcag
      481 gccgagctcg acgagctcgt ggcggattct ttcgacctca ctcaaaaaga acgcgagcgt
      541 ctccgagatt tccggagctc ggttgccgac gctcgtcctc gggattaagg tcccgagtcg
      601 cccgcatgtc tggtttggtc cacctcaaga cgtgggggcg gcgtgtgctg ccagcagcgt
      661 gcgtcctcgc ggcgctactc gtcggcggca aagctgcgct ctcgcgcgcc tcgatcgagc
      721 cgccgcagcc cgtgccggcg ccccggccca gtgcgcgctc ggcgccgccc gcgccgcccg
      781 gcccgagtca cgtcgcgctc gagccgctcg acgtgcgtcc cacgccaaac ccgctgcgtg
      841 gcctctcccc cgccgagctc gaccggctcg cgctcaccaa accgagttca ctcggctcga
      901 tctgcgtcgg ccgcccgaat cgcgggcagc tgtggaactc cgtcgagctc gcctccgcgc
      961 cgggcctgca cgtcatggtg cagcacgaca cgagcttcgg caccgacgcg acggtgcgca
     1021 cgatccgcgc ggcggtcgct gagtttcgca cctcttaccc gaacgccccc gatctcgccg
     1081 tcggtgatct cagccatgcg cacggcggct acttgcgccc gcaccacagc catcaactcg
     1141 gtctcgacgc cgacctcggt tacttctacc gggagggcgg caagtggtac gcgaaggcca
     1201 ccgccgaaaa cctcgatcgc gagctcacgt gggcattcct caaagccctg atcgcgcaag
     1261 gcagcaccga atacattttc atggaccgct cggtgcaagg gctgcttcgc gcctacgcgc
     1321 tcgcgcaggg tgaagacgcc acgtggctcg acacgctgtt cgaaagccct gcccaccgcg
     1381 acacgctgat tcgccacgcc tacggccaca tcacgcattt tcacgtgcgt ttcctcgatc
     1441 cggccgcgga gcgcaccgga cgcctgctcg ccgcacggct cgcgccccgg cggcgtttcg
     1501 cgcggcattg acgggcgagc gtcgcgtggc gcggcttacg ggtaccgcac gcgacggcgc
     1561 gcagcgcggc acgccgtctc agcgattgca gccgatacgc gcgtagtcga ccgccacttc
     1621 gtcgaaccac acgtcgaacg cgggcggatc cgtgttcgcc tggtagagcc accagccgat
     1681 ccacatcgcg tcgaactgcg gcaaaacgaa ggcgtcgctc gtgccaccgt gattcgtcga
     1741 gctcgtcgcg agtgacgggt gttcgacgcc gtcccaccag aatttcgtct ggttcgcgct
     1801 gccgtcgaac atccattcga gacacaccca ggcttgcgcg ggaacggctt tgggtttgcc
     1861 cgccggatcg gcgtcgaggt tcgtccaatc cccggtgtcg ccacggtcgc tgcccacgcc
     1921 gaagagcgcg aggtcatgat tcgaatccca ctgcccgccg acgcggattt cgggggcgtc
     1981 ttgcgccgtg cccgcctgtg cgccagagat cgtccagtgt gcccaggcgg gcgcggtcgg
     2041 cagcgcctcg aaccagacga agacgcgcgc gtagtaggtg tcgttcggcg ccgggaacgt
     2101 cttggtttgc gtgatgtacg acaggccgtt gtccgtcgtg tgaaagtgcg ccgagtgcgt
     2161 cccgcgcgcg gcgcgcacgg tctcgatcgt cggcgccgca ccgcgcgact tccacgtccc
     2221 cgtgtcgagc gagccgctct cgaagtcttc gcacaacgcg aagcccgcgt tcttgcagcg
     2281 actctccccg aaaaaatcgc cgcgattggt cgaaaatccc gcgctgccgc cgccgttcgc
     2341 tgcgcccgcg tcaggtgcac cggcgtcagg cgcgccgctc gcttgcgcag gcgccccgcc
     2401 cgcaccgctg ctccgccctc cgccggcctt ggcgccggca ccgcccttcg cgccgcccgc
     2461 accggtgtta gccgcactgc cggccgcgcc ggcgcgcgcg ttcgcactgc ccgccgtagc
     2521 ggccaagccg cctgccccgt agccgccact gccggcgctc ccacccgtgc gcgcctgtgt
     2581 cgtgctcgtg ccggcggcgc cgttcggtac gacgccagcc gcaccagcgg tttcggctcc
     2641 gccgctcccc gcgcgacgtt tgagaccggt gtccggcaat tgtgcgcacg agactgcgag
     2701 cgc
//
LOCUS       DATIML010000724         2019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2460423, whole genome shotgun sequence.
ACCESSION   DATIML010000724 DATIML010000000
VERSION     DATIML010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2460423"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..1262)
                     /locus_tag="VLJ38_12475"
     CDS             complement(174..1262)
                     /locus_tag="VLJ38_12475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSU40382.1"
                     /translation="MRDPYEILGVGRSATESEIKLAFRKLAILHHPDRNQDAPEAQTR
                     FKEINAAYQILSDPQKRAAYDRFGEAAFRPGGAGGGSDFGDFGGLDSIFSDLLGAFGL
                     RTSEGGHVKKTLELTFEESARGAKKELVYERIDVCSDCHGRGAAPGARVDTCSACGGR
                     GRVRYQQAFLPIALERPCTTCRGTGSIPSARCSRCDGAGVATSSRTITIDVPAGIEPG
                     SSRTLNGEGHRLKPHQPPGDLELLIDVAPHPFFRRSGDDVLCRVPVTFTQAALGGEVV
                     VPTLSGKVKLKIPASSQPGAVLRIRGQGFPHRLRSGAGDQLVEIAVEVPEQLSDRAKT
                     LLRELGDELGQDAPDERRSFLEKLKELF"
     gene            1308..1709
                     /locus_tag="VLJ38_12480"
     CDS             1308..1709
                     /locus_tag="VLJ38_12480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02266 family protein"
                     /protein_id="HSU40383.1"
                     /translation="MSNDPEDDRRRQYRAPIELKVEYKRLNTFFADYTKNISRGGSFI
                     ATEKPLPVGTEFVFALGVPNLEQPLRLRGKVIWVTTQAQATRANPAGMGIEFQYDEHE
                     RREKEAAVERLMTAELGEHLTTKLLGRKPQE"
     gene            1804..>2019
                     /locus_tag="VLJ38_12485"
     CDS             1804..>2019
                     /locus_tag="VLJ38_12485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40384.1"
                     /translation="MAKKKVKPIPKGYHSVQAALNLTDAKGAMAFVKQVFGGKVLEQM
                     AGNDGKLMHGAVKLGDSVVMFSDAMNEP"
BASE COUNT          338 a          638 c          701 g          342 t
ORIGIN      
        1 cgctcgtgcc gatcgtgatc tggtctgcca aagactcacg ggtcgtggtg ggcggggcgt
       61 tgccccgctg gtttcacgtt caaagccaat ccccgcagct cctcgggccc aatccccgaa
      121 ctcataccaa atccaagagc tcttcgaatc ttgggtcggc actttcgcgc ggctcagaac
      181 agctctttca atttttcgag gaagctccgg cgttcgtcgg gggcgtcttg accgagttcg
      241 tcgccgagct cgcgcaggag agtcttggcg cggtcggaga gctgttcggg gacttcgacc
      301 gcgatttcga ccagttgatc gccggcgccc gagcgcaggc gatgcggaaa gccttggccg
      361 cggatgcgga gcacggcgcc cggttgcgac gaagcgggga tcttcagttt gaccttgccg
      421 ctgagggtcg ggaccacgac ttccccgccg agcgcggctt gcgtgaaggt gactggaacg
      481 cggcagagta cgtcgtcgcc cgaacgtcga aagaagggat ggggcgccac gtcgatcagg
      541 agctcgagat cgccgggcgg ttggtgcggc ttcaggcggt ggccttcgcc gttcagcgtg
      601 cggctcgagc ctggctcgat gccggcgggg acgtcgatcg tgatcgtgcg cgagctcgtg
      661 gcgacgcccg cgccgtcgca gcgcgagcag cgcgcgctcg ggatcgaacc cgtgccgcga
      721 caggtcgtgc acggtcgctc gagcgcgatg ggcaagaacg cctgctggta gcggacccgc
      781 ccgcgcccgc cgcacgccga gcacgtgtcg acgcgcgccc ccggcgccgc gccgcggccg
      841 tgacagtcgc tgcacacgtc gatgcgttcg tagacgagct ccttcttcgc gccgcgcgcc
      901 gactcctcga acgtgagctc gagcgtcttt ttgacgtggc cgccctcgct cgtgcgcagg
      961 ccgaacgcgc cgagtagatc gctgaagatg gagtcgagcc cgccgaagtc gccgaagtcg
     1021 gagccgcccc ccgcgcctcc gggacgaaac gccgcctccc cgaaccggtc gtacgccgcg
     1081 cgtttctggg ggtcgctcag gatctggtaa gcggcgttaa tctctttgaa gcgggtctgc
     1141 gcttcggggg cgtcctggtt gcggtccgga tgatgcagga tggcgagctt gcgaaatgcg
     1201 agtttgattt cgctctcggt ggcggaccgc ccgacaccca agatctcgta gggatctcgc
     1261 acctgatgtt gatagcacgc gcggtcccgg gtgataatct gagctccgtg agtaacgacc
     1321 ccgaagacga tcgccggcgc cagtaccggg cgccgatcga gctcaaggtc gagtacaagc
     1381 ggctcaacac gtttttcgcg gattacacga agaacatttc ccggggcggc tcgttcatcg
     1441 cgaccgagaa gccgctgccc gtcggtaccg agttcgtctt cgcgctcggc gtaccgaacc
     1501 tggagcagcc gctccgtcta cgcggcaagg tgatctgggt gacgacgcag gcgcaggcga
     1561 cgcgcgccaa tccggccggg atgggcatcg aatttcagta tgacgagcac gagcgccgcg
     1621 agaaagaggc cgccgtcgag cggctcatga ccgccgagct cggcgaacac ctcacgacca
     1681 agctgctcgg tcgcaaaccg caggagtgag cggagcgagc ggtttcgccg cgcgccttgc
     1741 cgtccgcgcg tggagctttc ggtcgcgggc gagcggcggt atgccgccct gcggaggcag
     1801 tcgatggcga agaagaaggt gaaaccaatc ccgaagggct atcactcggt ccaggccgcc
     1861 ctgaatctca ccgacgcgaa gggcgcgatg gcgttcgtga agcaggtatt cggcggtaaa
     1921 gtgctcgagc agatggcggg gaacgacggc aaactgatgc acggcgccgt caagctgggc
     1981 gactcggtcg tgatgttttc ggacgcgatg aacgagccc
//
LOCUS       DATIML010000725         2817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3903128, whole genome shotgun sequence.
ACCESSION   DATIML010000725 DATIML010000000
VERSION     DATIML010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3903128"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VLJ38_12490"
     CDS             complement(<1..394)
                     /locus_tag="VLJ38_12490"
                     /inference="COORDINATES: protein motif:HMM:NF017946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HSU40385.1"
                     /translation="MHALRFYSTLYRTALKSVAEYRVDFAVGIVTAVAMQLAALAFYW
                     VIFARTPALGGWSPGQVLLLFGFTAMVLGLSEATLNGIWWLPYYILDGQLDRLLTFPV
                     NSLAFVLLSRPELHSFGNFAAGALSVAVA"
     gene            complement(400..1227)
                     /locus_tag="VLJ38_12495"
     CDS             complement(400..1227)
                     /locus_tag="VLJ38_12495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40386.1"
                     /translation="MSTLPAPTLLQAIAGFCVLAQKTAQTRLTYRLAMLVTLLASAFA
                     YCVFLLVWEEVYRQNPHAGPLSREQMLGYLVIAFLVNTMLILNVESRFLQRVRMGLVA
                     IDLVRPLGFVFVQLAQATGDLMVNAFYAVPIYVVGLAFAGPALYPASWLAAVLGSVSV
                     ALAFLVGFGVSYLIVQASFVLQSGYGVLFARAALHQVFSGLSAPLVMFPPPLRRVAAW
                     LPFRHEIETPARLWLGQASLAEAPSLLLQQAAWGVGLVLAGELIFRAVMHRHQIQGG"
     gene            complement(1224..2243)
                     /locus_tag="VLJ38_12500"
     CDS             complement(1224..2243)
                     /locus_tag="VLJ38_12500"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU40387.1"
                     /translation="MMVPAILVENLGKTYTRRKRKAGFWAGLRAYLSTASERVAAVTE
                     LSFRIERGESVGLIGENGAGKSTTVKMLTGILVPSEGRVETLGVVPWRERRRLAQNMG
                     VVFGQKPQILWDIPARESFRLLKAMYAIPNEVFRFTYDEAVERLELGEFLDTPVRLLS
                     LGQRMRCDLAASLLHAPAVAFLDEPTIGLDVLVKERVREHLIEMRRRFGTTIVLTTHD
                     LKDISATCERLLVLDRGRLLYDGSRQGFEERFAHGRTLLVELGSEADASTRSALEHEL
                     AGDEVTFVWDTPHRLRVECARSASAPKVTASVLEHLHVADLAVHGAELDAIVTRLYRT
                     AKAPA"
     gene            complement(2278..>2817)
                     /locus_tag="VLJ38_12505"
     CDS             complement(2278..>2817)
                     /locus_tag="VLJ38_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion-transporting ATPase"
                     /protein_id="HSU40388.1"
                     /translation="PRFDVVLFDAPATGHGLDMLRVPKVIVELAPPGVLRADAERAWT
                     MFRDPRQSGVVVVTLPEELPVNETEELSRSLAEELRLPVAALVVNCLRSELFDAASRA
                     ALTPLARDLPLAPEPGSEALAAGVRRAVRERIQTNCRERLRALGHAELELPLLLGGAS
                     SHETIGVLAQRFAASWRAA"
BASE COUNT          526 a          943 c          982 g          366 t
ORIGIN      
        1 acgccaccgc cacgctgagc gcgcctgccg cgaagttacc gaacgagtgg agctccggcc
       61 gcgagagcag cacgaacgcg aggctattga ccggaaaggt gagcagccga tcgagctgcc
      121 cgtcgaggat gtagtacggc agccaccaga tgccgttcag cgtcgcttcc gagagcccga
      181 gcaccatcgc cgtgaagccg aacagcaaga gcacctgtcc cggcgaccag ccaccgagtg
      241 cgggcgtgcg ggcgaagatc acccagtaga aggcgagcgc ggcgagctgc atcgcgacgg
      301 ccgtcacgat cccgacggcg aagtcgacgc gatactcggc gacggatttc aacgccgtgc
      361 gataaagcgt cgaatagaac cgcagggcgt gcattcgagc tagccgccct ggatttgatg
      421 gcggtgcatc acggcgcgaa aaatgagctc gcccgcgagc acgagcccga cgccccaggc
      481 cgcttgctgc aggagcaggc tcggcgcttc cgcgagcgag gcctggccga gccacaggcg
      541 cgcaggcgtc tcgatctcgt gccgaaaagg gagccacgcc gcaacgcgcc ggagcggcgg
      601 cgggaacatg acgagcggcg ccgaaagccc cgaaaacacc tggtgcaacg ccgcgcgcgc
      661 gaagagcacg ccgtatcccg actgcagcac gaacgacgcc tgcacgatga ggtagctcac
      721 accgaagccg accaagaacg cgagcgcgac gctcacgctg ccgagcacgg cggcgagcca
      781 cgacgccggg tagagcgccg gacccgcgaa cgcgagtccg acgacgtaga tcggcacggc
      841 gtagaacgcg ttgaccatca agtcgccggt ggcttgcgcc aactggacga acacgaagcc
      901 gagcggccgc acgaggtcga tcgcgacgag acccatgcgc acgcgctgca agaagcgact
      961 ctcgacgttc aagatgagca tcgtgttcac gaggaacgcg atcacgagat agccgagcat
     1021 ctgttcgcgt gagagcgggc cggcgtgtgg attttggcga tacacctcct cccacacgag
     1081 caagaagacg cagtaagcga aagcgctcgc gagcagggtg acgagcatcg cgagccggta
     1141 ggtgagccgg gtctgcgcgg tcttttgcgc gagcacgcag aagccggcga tggcttgcag
     1201 gagcgtcgga gccggcagcg tgctcacgcc ggagccttgg ccgtgcggta caggcgcgtg
     1261 acgatcgcgt cgagctcggc gccatgaacg gcgaggtcag cgacgtgcag gtgctcgagc
     1321 acgctcgccg tgaccttggg cgcgctcgcc gagcgggcgc actcgacgcg caaacggtgc
     1381 ggcgtgtccc agacgaacgt cacttcgtcg ccagcgagct cgtgctcgag cgcgctccgc
     1441 gtcgaggcat cggcttcgct gccgagctcg acgagcagcg tgcgcccgtg agcgaagcgc
     1501 tcctcgaaac cctgacggct gccgtcgtag agcagccggc cgcgatccaa gacgagcagc
     1561 cgctcgcacg tcgcgctgat gtccttcaag tcgtgcgtcg tgagcacgat cgtggtgccg
     1621 aaacggcgcc gcatctcgat caaatgctcg cgcacgcgct ccttcacgag cacgtcgagg
     1681 ccgatcgtgg gttcatccag gaacgcgacc gccggcgcgt gcaggagcga cgccgccaaa
     1741 tcgcaacgca tgcgctggcc gagcgacaag agccgcacgg gcgtgtcgag aaactcgccg
     1801 agctcgagcc gctcgacggc ttcgtcgtag gtgaagcgaa acacctcgtt cgggatggcg
     1861 tacatcgcct tgagtaggcg aaagctctcg cgcgcgggga tatcccagag gatctgcggc
     1921 ttctgcccga acacgacgcc catgttctgc gccagtcgcc gccgctcgcg ccagggcacg
     1981 accccgagcg tctcgacgcg accttcgctc ggcacgagga taccggtgag catcttcacg
     2041 gtcgtggact tgccggcacc gttttcgccg atgaggccga cgctctcgcc gcgctcgatc
     2101 cgaaacgaga gctccgtcac cgccgccacc cgctcggacg cggtcgagag gtacgcgcgc
     2161 aggcctgccc aaaaacccgc tttgcgcttg cggcgcgtgt acgtcttgcc gagattttcg
     2221 accaggatcg cggggaccat catgccgcca aggagcgcgc gtcgcagcag gggtgcgtca
     2281 cgccgcgcgc cacgacgcgg cgaagcgttg cgcgagcacg ccgatggttt cgtgcgacga
     2341 cgcgcccccg agcaggagcg gcaattcgag ctcggcgtgc cccagggcgc gcaggcgctc
     2401 gcggcagttg gtttggatgc gttcgcgcac ggcgcggcgg acgccggctg cgagcgcctc
     2461 cgagccaggc tcgggtgcta gcggcaagtc gcgcgcgagc ggcgtgagcg ccgcgcgcga
     2521 ggccgcgtcg aacagttcgg agcgcaggca attgacgacg agcgcggcga cgggcagccg
     2581 cagctcctcg gcgagcgagc gcgagagctc ctcggtctcg tttacgggta gctcttcggg
     2641 caacgtgacg acgacgacgc cggactgcct cggatcgcga aacatggtcc acgcgcgttc
     2701 ggcgtcagcg cgcagcaccc cgggcggcgc aagctccacg atgaccttgg gcacgcgcag
     2761 catgtcgagg ccgtgcccgg tggcgggcgc gtcgaacagc acgacgtcga agcgcgg
//
LOCUS       DATIML010000726         2834 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5064893, whole genome shotgun sequence.
ACCESSION   DATIML010000726 DATIML010000000
VERSION     DATIML010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5064893"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VLJ38_12510"
     CDS             complement(<1..673)
                     /locus_tag="VLJ38_12510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40389.1"
                     /translation="MSGAARSVLGVLGLAAAFGPGCSTAGSTWMAEPLTPNDTSAVGQ
                     DYTPEPDAAPVRHGVRSRTLGSGTPSEEAQGAPPNAPVAGGRSLGTFRNTYYDFPSEA
                     DYDGPTVALPNKSCGKIADVPQSFFEAICVQGSGTLRRGATVSFAKRVCECAPVCPRT
                     GQKICFDELDAREFPWGRGATGKPITPLLTVAVDPAVIPLGTAIYVPELDGMPRDSAG
                     ASAHDG"
     gene            complement(670..1107)
                     /locus_tag="VLJ38_12515"
     CDS             complement(670..1107)
                     /locus_tag="VLJ38_12515"
                     /inference="COORDINATES: protein motif:HMM:NF013331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HSU40390.1"
                     /translation="MTEPTLYEELGGESVLRRVIERFVDRLFDDVMIGYLFRAADRAR
                     VKEKEFEHAAEHLGAPIAYTGRPVAAAHAPHRIRGGQFMRRVQILKETLAEFGVPATV
                     AEHWISHTLALRPLVTSDEDGVCDPSLGARAPAGDTPGKGARE"
     gene            complement(1132..1623)
                     /locus_tag="VLJ38_12520"
     CDS             complement(1132..1623)
                     /locus_tag="VLJ38_12520"
                     /inference="COORDINATES: protein motif:HMM:NF002449.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HSU40391.1"
                     /translation="MTCPCGLGESLETCCGPILKHEQKPPTAEALMRARYTAYATGDV
                     DFIVESHDPERKTEVDRKNTEAWSKQSEWLGLEITSTEKGQPEDDTGIVEFVARYKVK
                     STKIEHRERALFRKHNERWVFVDGLEIKGPPIKRTEPRVGRNDPCPCGSGKKYKKCHG
                     VAA"
     gene            complement(1901..>2834)
                     /locus_tag="VLJ38_12525"
     CDS             complement(1901..>2834)
                     /locus_tag="VLJ38_12525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HSU40392.1"
                     /translation="DTAFFEKTPKFLHYAPEVAVLTSIEHDHVDIYPTFASYLDAFER
                     FVALVPEHGLIVANATDAHVVQSVEKCARAQVAWFALADESTHGMPPHWLAAPAGADA
                     RGQAFDLYAGGVACGRLALPLPGRHNLKNAVAALAAVAQGYGARLADLGPALASFQGV
                     RRRQDLLGTPGGVFVYDDFAHHPTAVSETLAALRARHPEGRLFAVFEARSATACRRMH
                     QSEYAAAFDAADDVLFPPLGRLNLAPAEALDLDVLVSALRERGRRAARFDGVDAIVNE
                     LGKTTREGDVVALLSNGAFGGIHAKLLSKLAERG"
BASE COUNT          399 a          945 c          994 g          496 t
ORIGIN      
        1 agccgtcgtg cgccgaggcg cccgcgctgt cgcgcggcat gccgtcgagc tcgggcacgt
       61 aaatcgcggt tccgagcggg atcacggcgg ggtcgaccgc gaccgtcaag agcggggtga
      121 tgggcttgcc ggtcgcgccg cggccccacg ggaattcgcg tgcgtcgagc tcgtcgaagc
      181 aaatcttctg gcccgtgcgc gggcagaccg gcgcgcattc gcaaacgcgc ttggcgaagc
      241 tcacggtcgc gccgcgccgg agtgtaccgc tgccttgcac gcaaatcgct tcgaagaagg
      301 actgcggcac gtccgcgatc ttgccgcagc tcttgttcgg cagcgcgacg gtcgggccgt
      361 cgtagtcggc ttcgctcgga aaatcgtagt aggtattgcg gaaggtgccg agcgagcggc
      421 cgcccgcgac gggcgcgttg ggcggcgcgc cttgcgcctc ctcgctcggc gtgccgctgc
      481 cgagcgttcg ggaacgcacg ccgtgccgta cgggcgcggc gtccggctcc ggcgtgtagt
      541 cttgcccgac ggctgacgtg tcgttcggcg tgagcggctc cgccatccaa gtcgaacccg
      601 ccgtcgagca gcccgggccg aacgctgcgg cgaggccgag caccccgagc acggagcgcg
      661 cggcgccgct cactctcgcg cgccctttcc gggggtgtcg cccgcgggcg cgcgtgctcc
      721 gaggctcgga tcgcacacgc cgtcttcgtc ggacgtcacg agtgggcgga gggcgagcgt
      781 gtgcgaaatc caatgttcgg cgaccgtggc gggcacgccg aactccgcga gcgtctcctt
      841 cagaatttgc acacggcgca tgaactggcc gccgcggatc cgatgcggcg cgtgtgcggc
      901 tgcgaccggt cgtcccgtgt acgcgatcgg cgcgccgagg tgctcggcgg cgtgctcgaa
      961 ctccttctcc ttcacgcgcg cgcgatcggc ggcgcgaaac aggtagccaa tcatcacgtc
     1021 gtcgaacagg cgatcgacga agcgctcgat gacgcggcgg aggacgcttt cgcctccgag
     1081 ctcttcgtac agcgtcggct cggtcattgg atcaacgtgt tgcggtgggg ctcacgcggc
     1141 cacaccgtgg cactttttgt actttttacc gctgccgcac ggacagggat cgttgcggcc
     1201 gacgcgcggc tccgtgcgct tgatgggcgg ccctttgatc tcgagcccgt cgacgaagac
     1261 ccaacgctcg ttgtgtttgc gaaacagcgc gcgctcgcga tgttcgatct tcgtggactt
     1321 caccttgtag cgcgcgacga actcgacgat gccagtgtcg tcttcgggtt gccctttttc
     1381 ggtcgaggtg atctcgaggc cgagccactc cgactgcttc gaccacgctt cggtgttctt
     1441 gcggtcgacc tccgtcttgc gctccggatc gtgcgattcg acgatgaaat cgacgtcgcc
     1501 cgtcgcgtac gcggtgtagc gcgcgcgcat cagcgcttcg gcggtcggcg gcttctgctc
     1561 gtgcttgagg atggggccgc agcaagtctc gagcgattcg cctaggccgc aggggcaagt
     1621 catggccagg gcttagcatt agtcgaagtg tttggatccc ttgaccctcc gtttcgtgca
     1681 tgaatcggtc aagttttctg acgcgacgta ggccggatct cgaccggtgc tgtggggcga
     1741 cccgagcgag cccgagggca gcccgcgccc ggcctcgccg gcttgtcgcg ttgggttgtc
     1801 gcggctcggg tcgatcgtga tctgttcttc ctagactcac atgtcttgtc gggctggggc
     1861 tgcgcccgag ccagcattac ctcaatgcgc ttgggaggac ctagccgcgc tctgcgagct
     1921 tgctcaacaa tttggcgtga attccgccga aggcgccgtt cgagagcagc gccacgacgt
     1981 cgccctcgcg cgtggtcttc ccgagttcgt tgacgatcgc gtccacgccg tcgaagcgcg
     2041 cggcgcgccg cccgcgctcg cggagcgcgc tcacgagcac gtcgaggtcg agcgcttccg
     2101 cgggcgctag attcaggcgc cctagcggtg ggaacaggac gtcgtcggcg gcgtcgaaag
     2161 ccgcggcgta ttcgctctgg tgcatgcggc ggcacgccgt cgcgctgcgc gcctcgaaca
     2221 cggcgaacaa gcgcccttcc gggtgccgcg cccggagcgc cgcgagcgtc tcgctcaccg
     2281 ccgtcgggtg atgcgcgaaa tcgtcgtaca cgaagacgcc gcccggcgtg cctagcaaat
     2341 cctgccgccg ccgcaccccc tgaaacgacg cgagcgccgg ccccagatcc gcgagtcgcg
     2401 cgccgtagcc ctgcgccacg gcggcgagcg ctgcgacggc gtttttcaaa ttgtgccggc
     2461 cgggcagcgg cagcgcgagt cgcccgcagg ccacgccgcc cgcgtacaaa tcgaaggctt
     2521 ggccgcgcgc gtcggcgccc gcgggcgcgg cgagccagtg tggcggcatg ccgtgcgtcg
     2581 actcgtcggc gagcgcaaac caagcgactt gggcgcgggc gcacttttcg acgctctgca
     2641 cgacgtgtgc gtcggtcgcg ttcgcgacga tgagcccatg ttcgggaacg agcgcgacga
     2701 agcgctcgaa ggcgtcgaga tagctcgcga acgtcgggta gatgtcgacg tgatcgtgct
     2761 cgatcgacgt gagcacggcg acctcgggcg cgtagtgcag aaacttcggc gtcttctcga
     2821 agaaggccgt gtcg
//
LOCUS       DATIML010000727         6276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5065806, whole genome shotgun sequence.
ACCESSION   DATIML010000727 DATIML010000000
VERSION     DATIML010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6276
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5065806"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1667
                     /locus_tag="VLJ38_12530"
     CDS             <1..1667
                     /locus_tag="VLJ38_12530"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005971 - ribonucleoside-diphosphate
                     reductase complex [Evidence IEA];
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HSU40393.1"
                     /translation="IYGRYADIAKLSKFSGGIGVAYHRVRSRGSLIASTNGLSNGIVP
                     WLKTLDASVAAVNQGGKRKGACAVYLETWHADIEEFLELRNNTGDDARRTHHLNLANW
                     VPDLFMRRVESDDAWSLFDPKDVPELPDLFGEAFEHAYVEAERRGLAKKTLKARELYA
                     RMLRTLAETGNGWITFKDRANRCCNQTALPGRTVHLSNLCTEILEVTSESETAVCNLA
                     SINLARHTHVTEDGVRAFDFEKLARTVRAVVRQLDRVIDLGFYPIDSARGSNLAWRPV
                     GLGVMGLHDLFFQLGLAFDAPEARRLSRRIAEDVYFHALSTSADLAAERGAHPTFAET
                     RAAQGELQFDAWNGEVSDPERWEALRARIALTGLRNSLLVAIAPTATIASIAGCSECV
                     EPLVSNLFKRETLSGDFLQVNRYLVAELKRLGLWTETLRARLKLAEGSVQGLTELPEE
                     LRRVYRTAWELPMRSLIDMAAERGAFIDQSQSLNLFAESPSIEKLSSMYFHAWKSGLK
                     TTYYLRSRPATRIAKTEAPAALPDETRVATALACSLENPESCEACQ"
     gene            1658..2686
                     /locus_tag="VLJ38_12535"
     CDS             1658..2686
                     /locus_tag="VLJ38_12535"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005971 - ribonucleoside-diphosphate
                     reductase complex [Evidence IEA];
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HSU40394.1"
                     /translation="MPVSSAGRPARLLDPGLCLTLRPLAYPAFFELYRAAIKNTWSVE
                     EVDFATDAADLAERMTPAERHLVERLVAFFATGDSIVANNVVLCLYRHLNAPEARMYL
                     SRQLYEEALHVQFYLTLLDTYLPDPAARHRAFAAVENVPSIRRKADFCLRFLEGSARL
                     TRLETRGDRREFLKNLICFAACVEGLFFFGAFAYVYFLRSRGLLHGLAAGTSWVFRDE
                     SAHMAFAFEVVRTVRREEPELFDAELERDVANMIDEAVDCEAEFAADLLQGGIAGLSL
                     GDVRQYLEFCADQRLLTLGLGKRYGSKNPFSFMDLQDVQEHTNFFERRVSAYQVGIRG
                     DVALDSAF"
     gene            2708..5032
                     /gene="metE"
                     /locus_tag="VLJ38_12540"
     CDS             2708..5032
                     /gene="metE"
                     /locus_tag="VLJ38_12540"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF003556.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HSU40395.1"
                     /translation="MSVLSSCLGHPRIGANRELKRALEDFWAGKRSKTELLAVARELR
                     QRHWLAMRDAGIALVPSNDFSLYDHVLDTAVLFGVVPERYARVEDPLARYFAMARGLQ
                     EKTAGVDLEALEMTKWFDTNYHYIVPELEPEQRFRLDASKLLSELGEARALGVEPRPV
                     LLGPVSFLLLAKWAPFKGAGRHRLDLLEGLLPVYAELLERLEQAGVRAVQLDEPWLAL
                     DLDQRAESAFRSALHTLGELQRRPELVVATYFEGVEEQARLVTESGCEGLHVDLARAP
                     EQLDGVLGMLGERQSLSLGVIDGRNVWRADLDRAHALVHRAVERLGPERVIVATSCSL
                     LHVPVDLGAEHTLDAEVRSLLAFARQKLEEVVELASAAEIARPNGKGFEAARAALATR
                     RASARTRNAAVRARTAAVSPELLRRHAPFGVRKLAQRARLKLPCLPTTTIGSFPQTTE
                     VRKARADFRAGALTAADYRHFLEDQTRRALERQEALGLDVLVHGEFERNDMVEYFGEK
                     LDGFAFTEHGWVQSYGSRCVKPPVLFGDVLRRGPLTVDWARYAQSRTQKPVKGMLTGP
                     VTILKWSFVRDDQPLADTCRQIALALRDEVSDLEAAGIAVIQVDEPAIREGLPLRRAR
                     SGEYLAWAVDAFLLATSGARDETQIHTHMCYSEFGDILDAVARMDADVVSIETSRSKM
                     ELLTDFGRYRYPNDVGPGVYDIHSKRVPSQEEMMLLIRRAMEVLPPEQLWVNPDCGLK
                     TRQWPEVEAALSAMVAAARAVRAQLPQQPHLPAR"
     gene            complement(4996..6114)
                     /locus_tag="VLJ38_12545"
     CDS             complement(4996..6114)
                     /locus_tag="VLJ38_12545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40396.1"
                     /translation="MLRSRGVRGWVGAAVLWTAVSCASTFTNVEDSDRGGHSSLGGAG
                     MSAGRSGAAAGMRATAGTGTQGGQGAGGSAGGELAGEAGSAGAPVTSSGGTTSSGGRS
                     MTGGSGATAGTAGEAGDTTQGSGGSGGRAGSAGQAGSGGSPPADPIHRDGLVYWFSAD
                     SGVTQTNGGVSKWLDRSGNGNDAAQISSDSRPRLGTFADTGAPALVFDGDNDYLGLTP
                     LRTNFDAGVTFFAVARPTDGFYCMPLLELSNGPEMDDVSFGWTKTALSYEVFEDFVSG
                     QDGAFTLGEPRLVDITHAASGNVNLWMNGLADGLTLFDLPAAVTRGQTFVGKSLYAGC
                     STWNGEIAEIILYARELDLSERQDVESYLAGKWGCCGN"
BASE COUNT          984 a         2169 c         2051 g         1072 t
ORIGIN      
        1 cgatttacgg ccgctacgcc gacatcgcaa agctctcgaa gttttcgggc ggcatcggtg
       61 tcgcgtacca ccgcgtacgc tcgcggggct cgctgattgc cagcacgaac ggactttcga
      121 acggcatcgt gccgtggctc aagacgctcg atgcgtccgt cgccgccgtc aatcagggcg
      181 gcaagcgcaa gggcgcgtgc gccgtgtatc tcgagacgtg gcacgccgac atcgaggagt
      241 tcctcgagct tcgcaacaat actggcgacg acgcacgacg cacccaccat ttgaaccttg
      301 cgaactgggt gccggacctc ttcatgcggc gcgtcgagag cgacgacgct tggagcttat
      361 tcgatccgaa agacgtcccg gagctgcctg atctcttcgg cgaagctttc gagcacgcct
      421 acgtcgaggc cgaacggcgc ggactcgcga aaaagacgct caaagcgcgc gagctctacg
      481 cccgcatgct gcgcacgctc gcggagaccg gcaacggctg gataaccttc aaggatcgcg
      541 cgaaccgttg ctgcaaccag acggcgctgc cgggccgcac ggtgcacctc tcgaacctct
      601 gcaccgaaat cctcgaggtc acgtccgaaa gcgaaacggc cgtctgcaat ctcgcttcga
      661 tcaatctcgc gcgccacacg cacgtgacgg aggacggcgt gcgcgcgttc gacttcgaaa
      721 agctcgctcg cacggtgcgc gccgtcgtgc gccagctcga tcgcgtgata gacctcgggt
      781 tttacccgat cgactcggcg cgcggctcga acctcgcctg gcgtcccgtg gggctcggcg
      841 tgatgggcct ccacgatttg ttcttccaac tcggtctcgc gttcgacgca cccgaggcgc
      901 gccgactctc gcgccgcatc gcggaagacg tttactttca tgcgctttcg acctctgcgg
      961 acttggcggc cgagcgtggc gcccacccga ccttcgctga aacgcgcgcc gcgcagggtg
     1021 agctccagtt cgacgcttgg aacggcgagg tgagcgaccc cgagcgctgg gaagcgctgc
     1081 gcgctcgcat cgcgctcacg ggtctccgca attcgctgct cgtcgccatc gccccgacag
     1141 ccacgatcgc gtcgatcgcc ggctgctcgg agtgcgtcga gccactcgtc tcgaacctgt
     1201 tcaagcggga gaccttgtcc ggcgatttct tgcaggtgaa ccgctacctc gtcgccgagc
     1261 tcaagcgctt gggactctgg accgagacgc tgcgcgcacg cttgaagctc gccgagggct
     1321 ccgttcaggg cctcaccgag ctgccggagg agctccgtcg cgtgtatcgc accgcctggg
     1381 agcttccgat gcgctcgctc atcgacatgg cggctgagcg cggcgccttc atcgatcaga
     1441 gccagtcgct caacctgttc gcggagagcc ccagcatcga aaagctctcg agcatgtact
     1501 tccacgcctg gaaatcggga ctaaagacga cgtattacct gcgctcgcgt ccggcgacgc
     1561 gcatcgccaa gacggaagcg ccggccgcct tgcccgacga aacgcgcgtg gccaccgcgc
     1621 tcgcctgctc actcgaaaac ccggaaagct gcgaggcgtg ccagtgagct cggccggccg
     1681 tcccgcgcgc ttgctcgatc cggggctctg cctcacgctg cgtccgctcg cctatccagc
     1741 gttcttcgag ctgtatcgcg cggcgatcaa gaacacctgg agcgtggagg aagtcgactt
     1801 cgcgacggac gcggccgacc tagccgagcg catgacgccg gcggagcggc atttggtcga
     1861 gcggctcgtc gcgttcttcg cgacgggcga ttccatcgtc gccaacaacg tcgtcctctg
     1921 cctctaccgg cacctgaacg cgccggaagc gcgcatgtac ctctcgcgcc agctctacga
     1981 ggaggcgctg cacgtgcagt tctacctcac gctgctcgac acgtacctgc cggatccggc
     2041 ggcgcggcac cgagcctttg ccgccgtgga aaacgtgccg tcgatccggc gtaaggcgga
     2101 tttttgccta agatttctcg agggatcggc ccgcttgacg cggctcgaga cgcgcggcga
     2161 caggcgagaa ttcttgaaga atttgatctg cttcgcggcg tgtgtcgaag ggctcttctt
     2221 cttcggcgcg tttgcgtacg tgtacttctt gcgctcgcgc gggctcttgc acgggctcgc
     2281 tgccgggacc agctgggtgt ttcgcgacga gagcgcgcac atggcgtttg cgttcgaggt
     2341 cgtgcgcacc gtccggcgtg aggagcccga gcttttcgac gccgagctcg aacgcgacgt
     2401 ggcgaacatg atcgacgagg ccgtcgactg tgaggcagaa ttcgccgcgg atctcttgca
     2461 gggcggcatc gcggggctct cgctcggcga cgtgcggcag tacctcgagt tctgcgccga
     2521 ccaacgcctg ctcacgctcg ggctcggcaa gcgctatggc tcgaagaatc cgttctcgtt
     2581 catggacctg caagacgtgc aggagcacac gaatttcttc gagcggcgtg tgtcggctta
     2641 tcaggtcggc attcgcggcg acgtcgcgct cgatagcgcg ttttgaagca cgaaaaggag
     2701 catggtcatg tccgttctct cgagttgtct cggtcatcca cgtatcggag ctaaccgtga
     2761 gctcaagcga gctctcgagg atttttgggc cggcaagcgc tccaaaacgg agctcttggc
     2821 ggtcgcgcgc gagctccggc agcgccactg gctcgccatg cgcgacgcgg ggatcgcgct
     2881 cgtgccgagc aacgacttct cgctttacga ccacgtgctc gatacggccg tgctcttcgg
     2941 tgtcgtgccg gagcgctacg cgcgcgtcga ggatccgctc gcgcgctact tcgcgatggc
     3001 gaggggcctg caagagaaga cggccggcgt cgacctcgaa gcgctcgaga tgacgaaatg
     3061 gttcgacacg aactaccact acatcgtgcc cgagctcgag ccggagcaac gcttccggct
     3121 cgacgcgagc aaactcttgt ctgagctcgg cgaggcacgc gcgctcggtg tcgagccgcg
     3181 ccccgtgttg ctcggccccg tgtcgtttct cctgctcgcc aaatgggcgc cgttcaaagg
     3241 cgccgggcgt caccgtctcg acctgctcga ggggctcttg cccgtttacg cggagctttt
     3301 ggagcggctc gagcaggcgg gcgttcgggc ggtgcagctc gacgagccct ggctcgcgct
     3361 cgatctcgat cagcgcgcag agagcgcatt tcgtagcgcg cttcacacgc tcggtgagct
     3421 tcagcgccgg cccgagctcg tggttgcgac gtacttcgag ggcgtcgagg aacaggcgcg
     3481 gctcgtcacc gaatccggct gcgagggact ccacgttgac ctcgcacgtg cccccgagca
     3541 gctcgatggc gtgcttggca tgctcggcga gcggcagagc ctgtcgctcg gcgtgatcga
     3601 cggccgcaac gtctggcgcg ccgacctcga ccgcgcccat gcgctcgtgc atcgcgccgt
     3661 cgagcggctc gggcccgagc gcgtcatcgt cgcgacctcg tgctcgctct tgcacgtgcc
     3721 cgtggatctc ggcgcggagc acacgctcga cgccgaggtt cgaagcctac tcgcgttcgc
     3781 gcgtcagaaa ctcgaagagg tcgtcgagct cgcgagcgcc gccgaaatcg cgcggccgaa
     3841 cggcaaaggg ttcgaagccg cccgtgcggc gctcgcgacg cggcgtgcgt cggcgcggac
     3901 gcgaaacgcc gcggtacgcg cccgaacggc cgctgtgtcc ccggagctct tgcggcggca
     3961 cgcgccgttc ggcgtgcgta agctcgcgca gcgcgctcgg ttgaaactgc cgtgcttgcc
     4021 gacgacgacg atcggctcgt tcccgcagac gaccgaggtg cgcaaggcgc gcgcggattt
     4081 tcgcgcgggc gcgctcacgg ccgccgatta ccggcacttc ttggaagacc agacgcgccg
     4141 cgcgctcgaa cgccaagaag cgctcggcct cgacgtgctc gtgcacggtg agttcgagcg
     4201 caacgacatg gtcgagtact tcggcgaaaa gctcgacggc ttcgcgttca ccgagcacgg
     4261 ctgggtgcaa agctacggct cgcgctgcgt caaaccgccg gtgctcttcg gcgacgtcct
     4321 gcgccgtggc ccgctcaccg tcgattgggc gcgctacgcc cagagccgca cgcaaaagcc
     4381 cgtcaaaggc atgctgaccg gccccgtcac gatcctcaaa tggtccttcg tgcgcgacga
     4441 tcagccgctc gccgacactt gccggcaaat cgcgctcgcg ctccgggacg aggtctcgga
     4501 cctcgaagct gccggcatcg ccgtgattca agtggacgag ccggcgattc gcgaggggct
     4561 gccgctgcgg cgcgcgcgct ccggcgaata cctcgcctgg gcggtcgacg cgttcttgct
     4621 cgcgacctcg ggcgcccgcg acgagacgca gatccacacg catatgtgct actcggagtt
     4681 cggcgatatc ctcgacgccg tggcgcgcat ggacgcggac gtggtctcga tcgagacctc
     4741 gcgctcgaag atggagctac tcaccgattt cggccgctac cgctacccga acgacgtggg
     4801 tccgggcgtc tacgacatcc attccaagcg cgtaccgagc caagaagaga tgatgctgct
     4861 catccggcgc gcgatggaag tgctgccccc cgagcaactc tgggtgaatc ccgattgcgg
     4921 gctcaagacg cggcaatggc cggaagtcga agccgcgctg tccgccatgg tcgcggcggc
     4981 tcgcgccgtg cgggctcagt tgccgcagca gccccacttg cctgcgaggt agctctcgac
     5041 gtcctgccgc tccgagaggt cgagctcgcg cgcgtagagg atgatctcgg cgatctcacc
     5101 gttccaggtg ctgcagcctg catacaggct cttgccgacg aacgtctgcc cgcgcgtgac
     5161 ggcagcgggc aaatcgaaca gcgtgaggcc atcggcgagc ccgttcatcc agaggttcac
     5221 gttgccggaa gcggcgtgcg tgatgtcgac caggcgcggc tcaccgagcg tgaacgcccc
     5281 gtcctggccg ctcacgaaat cctcgaacac ttcgtacgaa agcgccgtct tggtccagcc
     5341 gaagctcacg tcgtccatct ccgggccgtt cgagagctcg agcagcggca tgcagtagaa
     5401 gccgtccgtc gggcgcgcca cggcgaagaa cgtgacgccg gcgtcgaagt tcgtgcgcag
     5461 cggcgtgagc ccgaggtagt cgttgtcgcc gtcgaaaacg agcgcgggcg ctcccgtgtc
     5521 ggcaaaggtg ccgagccggg gccggctatc gctcgagatt tgtgcggcgt cgttaccgtt
     5581 ccccgagcgg tcgagccact tcgaaacgcc gccgttggtc tgcgtcacgc cggagtcggc
     5641 ggagaaccaa tacacgagcc cgtcgcggtg gatgggatcg gctggtgggc tgccgccgct
     5701 cccggcctgg cccgcgctcc cagcgcggcc cccgcttccg ccgctgcctt gagtcgtgtc
     5761 gccggcctca cccgcggtgc cggcggtcgc gccgctgccg ccagtcatcg agcgaccgcc
     5821 gctgctcgtc gtgccgcccg agctcgtgac gggcgccccc gcgctccctg cctcgccagc
     5881 gagctcgccc cccgcgctgc ctcccgcgcc ctgtccgcct tgggtccccg tacccgcggt
     5941 cgcgcgcatt cccgccgcgg caccggatcg gcccgcgctc atgccggcgc cgccgagcga
     6001 ggaatgcccg cctcgatccg agtcctcgac gttcgtgaac gtcgaggcac aggagacggc
     6061 tgtccaaagc actgcggcgc ccacccaccc gcgcacgcct ctcgagcgaa gcatcccctc
     6121 gttcgtagca tgaactcaga gctttaccct agctgccacg ctcgcgccgc ttttggcggg
     6181 ccttgcggag cccgccccgc gaccgatggg ttcagctcac acggcccgac gctggtgctc
     6241 gtcgtgccgg tgcgcgcggg cgaacgaacg gaaggc
//
LOCUS       DATIML010000728         2215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3328799, whole genome shotgun sequence.
ACCESSION   DATIML010000728 DATIML010000000
VERSION     DATIML010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3328799"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VLJ38_12550"
     CDS             <1..756
                     /locus_tag="VLJ38_12550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008767 - UDP-galactopyranose mutase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HSU40397.1"
                     /translation="RKRAEPVKHCRTSEEAVVSKVGRELYELFFKNYTRKQWGLDPSE
                     LDASVAARVPARTNRDDRYFTDEFQAMPRHGFTRLFQKMLDHPNITLALKTDYRELID
                     EVDFGAMVYSGPVDAFFDYRFGKLPYRSLEFRFETHEREVFQPQAVVNYPNEEEYTRI
                     TEFKYLTGQRHPFTSVVYEYPKADGDPYYPIPRPVNAELYRKYKLLADATPQVHFVGR
                     LATYKYYNMDQVVAQVLALTDRILGRERPSRAA"
     gene            760..>2215
                     /locus_tag="VLJ38_12555"
     CDS             760..>2215
                     /locus_tag="VLJ38_12555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HSU40398.1"
                     /translation="MPRSHLTRLGLARGAPKDRAAGYPRPLLERSEWTSLDGQWEFAL
                     DPGASLASPEAVRFGAKIQVPFAPETPRSGIGDTGLYRACWYRREFVAPDLGQGDRLL
                     LRFGAVDYEATVWLDGRVVARHEGGYTPFSADVTELCRGGGVHELTVRAEDEPGDLTK
                     PRGKQDWQLEPHSIWYPRTSGIWQTVWLERVPRARVAELQWTPHLGRWEIGMDARVIA
                     PPGERFWLSVRLNVGDVIFADDRYAVVDGEVHRRIALSDPGIDDFRNEFLWSPASPTL
                     IEIAIELSSADGAMIDNVRSYTALRSFMVDGTRFVLNGRPYPLRLVLDQGYWPDTGLT
                     PPDDAALRRDIELTKAMGFNGARKHQKIEDPRYLHWADRLGLLVWEEMPSAYRFTERS
                     IARLVKEWIDVVRRDMSHPCVVAWVPFNESWGVPNLPDSKPERHYVEAIYHLTKTLDS
                     SRPVVGNDGWESVATDILGIHDYDGSPERLARRYA"
BASE COUNT          374 a          740 c          726 g          375 t
ORIGIN      
        1 cgcaagcgcg ccgagcccgt gaagcactgc cgcacctcgg aggaggccgt cgtctcgaag
       61 gtggggcgcg agctctacga gctgttcttc aagaactaca cgcgcaagca atgggggctc
      121 gatccgtccg agctcgacgc gtccgtcgcg gcgcgcgtgc cggcgcgcac gaaccgcgac
      181 gatcggtatt ttaccgacga atttcaggcg atgccgcgtc acggcttcac gcgcttgttc
      241 caaaaaatgc tggatcatcc caacatcaca ctggcgctca agacggatta tcgcgagctc
      301 atcgacgagg tcgacttcgg cgcgatggtc tacagcggtc ccgtcgacgc ctttttcgac
      361 taccggttcg ggaagctgcc gtatcggtca ctcgaattcc gtttcgaaac gcacgagcgc
      421 gaggtgtttc agccgcaggc ggtcgtgaac tatccgaacg aggaggagta cacgcgcatc
      481 acggagttca agtacctgac cgggcagcgt catccgttca cgagcgtcgt ctacgagtat
      541 ccgaaggccg atggcgatcc gtattacccg attccgcgcc ccgtgaacgc cgagctctat
      601 cgcaagtaca agctgctcgc cgacgccacg ccgcaggtgc acttcgtcgg gcggctcgcg
      661 acgtacaagt attacaacat ggaccaggtc gtggctcagg tgctcgccct gaccgatcgc
      721 atcctcggtc gggagcgccc gtctcgagcg gcgtagctca tgccgaggtc acacctcacg
      781 cggctcgggc tcgcgcgcgg cgctccgaag gatcgagcgg cgggctatcc gcggccgttg
      841 ctcgagcgca gcgagtggac gagcctcgac ggtcaatggg agtttgcgct cgaccccgga
      901 gcttcgctcg cgagccccga agccgtgcgc ttcggcgcga agattcaggt gccgttcgcg
      961 ccggagacgc cgcgcagcgg catcggcgac accgggcttt accgcgcctg ctggtaccgg
     1021 cgcgagttcg tggcgccgga cctcgggcag ggcgatcgct tgctgctccg cttcggcgcc
     1081 gtcgattacg aggcgacggt gtggctcgac ggccgcgtgg tggcgcgcca tgaaggaggc
     1141 tacacgccat tttcggcgga cgtgaccgag ctctgccgcg gcggcggcgt tcacgagctc
     1201 accgtgcgag ccgaagacga gccgggcgat ctcacgaagc cgcgcggcaa gcaggactgg
     1261 cagctcgagc cgcactcgat ctggtacccg cgcacgtcgg gcatctggca gaccgtgtgg
     1321 ctcgagcgcg tgccccgcgc gcgcgtggcc gagctgcagt ggacgccgca cctcggccgc
     1381 tgggaaatcg gcatggatgc gcgcgtgatc gctcccccgg gcgagcgctt ctggctctcg
     1441 gtgcggctga acgtgggcga cgttattttc gccgatgatc gctacgccgt cgtggacggc
     1501 gaggtccacc gccgcatcgc gctgagcgat ccgggcatcg acgattttcg gaacgaattt
     1561 ttgtggagcc ctgcgtctcc cacgctgatc gagatcgcaa tcgaactgtc gtctgcggac
     1621 ggcgccatga tcgacaacgt ccggagctac accgccctcc gctcgttcat ggtcgacggg
     1681 acgcgcttcg tactcaacgg ccgcccgtat ccgctgcgtc tcgtgctcga tcagggctac
     1741 tggcccgaca cgggcctcac gccgccggat gacgccgcgc tccggcgcga catcgagctc
     1801 acgaaggcca tgggcttcaa cggcgcgcgc aagcatcaga aaatcgagga cccccgctac
     1861 ctgcactggg ccgaccggct gggcttgctc gtgtgggaag aaatgccgag cgcctatcgc
     1921 ttcaccgagc gctccatcgc gcggctggtc aaggagtgga tcgacgtggt tcggcgcgac
     1981 atgagccacc cgtgcgtggt ggcgtgggtc ccgttcaacg aatcgtgggg cgtgcccaac
     2041 ctgcccgaca gcaagcccga acgccactac gtcgaagcca tctaccattt gacgaagacg
     2101 ctcgattcct cgcgtcccgt cgtcggcaac gacggctggg aaagcgtcgc gacggacatc
     2161 ctcggcattc acgactacga cggctcaccc gagcgcctgg cgcgtcgtta cgcga
//
LOCUS       DATIML010000729         3197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5355019, whole genome shotgun sequence.
ACCESSION   DATIML010000729 DATIML010000000
VERSION     DATIML010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5355019"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..837
                     /locus_tag="VLJ38_12560"
     CDS             <1..837
                     /locus_tag="VLJ38_12560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40399.1"
                     /translation="MKARLSYGSFAPARARSRGAGARCSLLLASLAAAAHGARPLPEA
                     VLTESATDIDAVEHGELEWELNLSVLGAREGGARSAATSVELEWRMLDELGLRLEPTL
                     ERFSDGLTASTEAGFAGALAFGLFHDFERDTHVQLELLAHTLESAPHAFEMSDAELPG
                     AADLVAATRRGRFTLRATAGAEAFGSFVHAPLHTELALLTGILRDERYGFVALDVRAD
                     WARRAPFVIAPEFVADGSPLGIPLRLSAALPFNVGARSTSESFGLLLRLTLTTERERL
                     AQ"
     gene            888..1856
                     /locus_tag="VLJ38_12565"
     CDS             888..1856
                     /locus_tag="VLJ38_12565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40400.1"
                     /translation="MISTLRASSAAFTASIFVFAAACGGTSVSHVDAGGMAGMSESGG
                     SGTTGGSSGHGGSGATGGTRGSSGGTTSTGGTGGTGATGGFGNSGSTGAFGGTGALGG
                     TGAFGGTGALGGSGAFGGTGALGGTGAFGGTGALGGAGGTAGHSGGGTGGISGGGGSG
                     GSTPCVYGGMCTTEGATCSESACCSCSHTCKGGVWSAGICPPCAAPICPQDPPRMGDM
                     CSVCSIPQGGCSWDERGFDGPLYEADCVNGRWAVSTLDAHGCCSMDSDCSGGSCVQGV
                     CKTPPSTGCWTERDCVNGGLCQGADVCTCGAECFAADSPGNCVYPL"
     gene            complement(1896..2549)
                     /locus_tag="VLJ38_12570"
     CDS             complement(1896..2549)
                     /locus_tag="VLJ38_12570"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent F420 reductase"
                     /protein_id="HSU40401.1"
                     /translation="MKTIGLIGAGRIGSQVARLAIAAGYDVVISNSRGPETLTALVKE
                     LGPRARAATALEAAKSGELVVVTIPLKNIRSVPPEPLAGKIVLDTNNYYPQRDGQIRE
                     LDQQTLTSSELLQQHLPASKVVKAFNHIYAAELTTHGQPRGTPNRRALVIAGNDAAAK
                     RTVTELLDQFGFDTVDAGPLAESWRIQPNTPGYGPRRTAEELRRDLAAAQRPAPARA"
     gene            complement(2602..>3197)
                     /locus_tag="VLJ38_12575"
     CDS             complement(2602..>3197)
                     /locus_tag="VLJ38_12575"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSU40402.1"
                     /translation="SYGLAWDDRDNTVSAERGQFHSARVDLAPGGTAHVPQSWARVNV
                     ALRFYVPLVRHRLTFAARAVSDILLGDPPFYEMQRFDDTAAIGGANGVRGVPGQRYYG
                     KIKLFSNFELRARLFDFKLFGQKDAFGVAAFTDVGRVWSDLPADPMLDGSGVGLKLGI
                     GAGVRIYGGKSFVVRGDIAWSPDARPIGGYLAPGEIF"
BASE COUNT          466 a         1047 c         1150 g          534 t
ORIGIN      
        1 atgaaggccc gactttctta cggcagcttc gcgccagcgc gggctcggtc gcgcggcgcg
       61 ggcgcccgct gcagcttgct gctcgcgtcg ctcgctgcgg cggcgcacgg cgcgcgcccc
      121 ttgcccgaag cggtgctgac cgaaagcgcg acggacatcg acgccgtaga gcacggtgag
      181 ctcgagtggg agctcaacct gagcgtcctc ggtgcgcgcg aaggcggagc tcgttcggcg
      241 gccacgagtg tcgagctcga atggcgcatg ctcgacgagc tcggcttgcg cttggagccc
      301 actttggagc gcttctcgga cggcctcacg gcgagcaccg aggctggctt cgcgggtgcg
      361 ctcgccttcg ggttgttcca cgacttcgag cgggacacgc acgtccagct cgagctcctc
      421 gcgcacacgc tcgagtccgc gccgcacgca ttcgaaatgt ccgatgccga gctccccggc
      481 gccgccgatc tcgtcgcggc gacgcgccgt ggtcgtttca ccctgcgcgc gaccgcgggc
      541 gcggaagcat tcgggtcgtt cgtgcatgcc ccgcttcaca ccgagctggc gctgctcacg
      601 gggatcctcc gggacgaacg ttacgggttc gtggcgctcg acgtgcgcgc cgattgggcg
      661 aggcgcgcgc cgttcgtgat tgcgcccgag ttcgtcgccg acggctcgcc gctcgggatc
      721 cctttgcgct tgagcgcggc gctgccgttc aatgtaggtg ctcgtagcac ttcggagagc
      781 ttcgggctgt tgctccggct caccttgacg accgagcgcg agcggctcgc gcaatgaacc
      841 gcgctggcac agactgtgcg ggcacgctga ttgctaaatc tcggttcatg atctcgacac
      901 tgcgcgcttc gagcgctgcg ttcacggcat cgatcttcgt gttcgcggcg gcttgtggcg
      961 gaacgagcgt ctcccacgtc gatgccggcg gtatggcggg catgtccgag tccggcggaa
     1021 gtggcacaac gggcggcagc tccggccatg gcggctccgg agcgacaggc ggcacccgag
     1081 gcagcagcgg cggcaccact tccacgggcg gcacgggcgg cacgggcgcg acgggcggct
     1141 tcggtaattc cggcagcacg ggcgcgttcg gcggcaccgg tgcgctgggc ggcacgggtg
     1201 cgttcggcgg taccggtgcg ctcggcggct cgggcgcgtt cggcggtacc ggagcgctcg
     1261 gcggcacggg tgcgttcggc ggtaccggag cgctcggcgg cgcgggtgga acagcgggtc
     1321 actccggtgg cggcacgggc ggcatctccg gcggcggcgg ctcgggcggg agcaccccct
     1381 gcgtctacgg cggcatgtgc acgaccgagg gagcgacttg ctccgaaagc gcctgctgct
     1441 cgtgcagcca cacctgcaag ggcggcgtgt ggagcgccgg catttgcccg ccgtgcgcgg
     1501 cccccatctg cccgcaagac ccaccgcgca tgggcgacat gtgctccgtc tgcagcatcc
     1561 cgcagggcgg ttgtagctgg gacgaacgtg gcttcgacgg tccgctctat gaggccgact
     1621 gcgtgaacgg gcgctgggcc gtttcgacgt tggatgcaca cggctgctgt tcgatggaca
     1681 gcgactgctc gggtggctct tgcgtccagg gtgtttgcaa aacgccgccg agcactggct
     1741 gctggacgga gcgtgattgc gtcaacggag gcttgtgcca gggcgctgac gtgtgcacct
     1801 gcggggcgga gtgcttcgcc gcggacagtc cgggcaactg cgtgtacccg ctctgattcc
     1861 ggtcttccaa gatcgctgaa ctcgaggctc gagcctcaag cccgagcggg cgcgggtcgc
     1921 tgggccgcgg cgagatcgcg ccgcaactcc tcggccgtgc ggcgcggtcc gtagcccggc
     1981 gtgttcggct gaatgcgcca gctttcggcg agcggccccg cgtcgaccgt atcgaagccg
     2041 aactgatcga ggagctcggt caccgtgcgc ttggccgcgg cgtcgttgcc cgcgatcacg
     2101 agcgcgcgac gattcggcgt gccgcgcggc tggccgtgag tcgtgagctc ggcggcgtaa
     2161 atgtgattga aggctttgac caccttcgag gccggtaagt gctgctgcaa gagctcgctc
     2221 gacgtgagcg tctgttgatc gagttcgcgg atctgaccgt cgcgctgggg gtagtagttg
     2281 ttcgtgtcga gcacgatttt gccggccaac ggctcgggcg gcacggaccg gatatttttg
     2341 agggggatgg tcacgacgac gagctcgccg ctcttggcgg cctcgagggc cgtcgcggcg
     2401 cgagctcgcg ggccgagctc tttcaccagc gcagtcagcg tttccggacc gcgcgaattg
     2461 ctgatcacga cgtcgtagcc cgcggcgatc gcgagccggg cgacctgact gccgatgcgt
     2521 cccgcgccga tgagtccgat ggtcttcatg tccgcaaacc tggagcgggc cgcgccatgc
     2581 gcaagggcaa aggcggcgtc ctcagaagat ctcccccgga gcgagatagc cgccgatcgg
     2641 ccgtgcatcg ggggaccagg caatgtcgcc acgaacgacg aacgatttgc ccccgtaaat
     2701 ccgaacaccg gcaccgatcc cgagcttcaa gccgacgccc gacccgtcga gcatcggatc
     2761 ggccggtagg tcactccaca cccgccccac gtccgtgaag gccgcgactc cgaacgcgtc
     2821 tttctgaccg aagagcttga agtcgaacag cctggcgcga agctcgaagt tggaaaagag
     2881 cttgatcttg ccgtaatagc gctggcccgg cacgccgcgc acgccgttcg cgccgccgat
     2941 cgcggccgtg tcatcgaacc gttgcatctc gtaaaatggt gggtcaccga gtagaatatc
     3001 gctcaccgcg cgcgccgcga acgtcaggcg atgacgcacg agcggcacgt agaagcggag
     3061 tgcgacgttg acgcgcgccc agctttgcgg gacgtgcgcc gtgccgccgg gtgcgagatc
     3121 gacgcgcgcc gaatgaaatt gaccgcgttc ggccgagacg gtgttgtcgc ggtcgtccca
     3181 agcaaggccg taggaga
//
LOCUS       DATIML010000730         3742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1600013, whole genome shotgun sequence.
ACCESSION   DATIML010000730 DATIML010000000
VERSION     DATIML010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3742
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600013"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VLJ38_12580"
     CDS             complement(<1..705)
                     /locus_tag="VLJ38_12580"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40403.1"
                     /translation="MRLALLTASAALVLASAGKAEAQFNPHGRTKKTAPAPTRATPRP
                     ARAPSDQAARPKTPESGEAAERRASDREALIARYLGAALAQPGAEFPIQRLVELYRER
                     DGKLDALMAELERRAAGTGGERYAALLGLAAVERLEGNPERAIESYARASAEQPKNPA
                     AELALGHLYEQRGDSRAARTHFEQALARSTDPTERESLLRSLRGLALDQRDFTAATRY
                     QRELEQHAKGSFFVRAE"
     gene            complement(756..1526)
                     /locus_tag="VLJ38_12585"
     CDS             complement(756..1526)
                     /locus_tag="VLJ38_12585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40404.1"
                     /translation="MRRALVVSSLVVLAVACGGRSDLFEDPAGAGATSGATGGTGGST
                     AGTGGHGGTGARGGTGGVGGTFAGTGGLDGGVGGFGATGAVGATGGVGANGGVGANGG
                     VGAFGGVSGQGGSNIGGTGNTGGTGGTGARGGTGGRGGTGGVAATGGVAGSGGVSGSG
                     NSAGAPDGGFAGASPENCLACVASGCPSASKCFATPACTQGIFCGLGSCTGAGTDTAA
                     FTCWLGCFNGDTSLAFVALDAAICLSDTCAVACQAFTQ"
     gene            1608..>3742
                     /locus_tag="VLJ38_12590"
     CDS             1608..>3742
                     /locus_tag="VLJ38_12590"
                     /inference="COORDINATES: protein motif:HMM:NF021379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2079 domain-containing protein"
                     /protein_id="HSU40405.1"
                     /translation="MSGPSEAGSPEPAAAPEPAREPIDGKVLDPGTAAHLDTPVTEAD
                     APGPALNGEAPAVPPPGVEPSADSSDTDSRDALLVHGSRIVVLATLLGGAIAFWTQVA
                     FRSPWLDAFLLDNELEPGKRASLLLALVGGFLVGGVAAFVGIELWRRRSRPIVELEQW
                     AWFLSPLLMLPLGPVLFRPKVWMGRHDVLLPSLVLILLVFEQLAFRCLTNVPPAAHAW
                     WAEAVEQLPARLRKHGPLVIVVAAAAGFSAFFIFYTLRWHYKLRTGNYDLSINNNLMY
                     EGLHGKFLNSPLVFPKDPPKYLANHVKLGAYLFLPIYALFPRAETLFVIQSLFIGFGA
                     VPLFLFARRHVSEWTAALVCLAYLSYYPLHGASFSEFQAVPVAAFFIFLVIWAADTRR
                     YRWLAFGLVAALLMREDVSVGLAVLGAFYLLTGYRPGIGLVMALASTAYFLLLRFYVM
                     DAAGSWWFPNMYKELWADGEKGFRSVIKTMLTNPMFTLSKIIIEKKLIYVLHLLTPIV
                     FLPARRWYLWAAFLPGAFLTLLVTNYDPPITYSFHYVMHWAPYLFAASVITLEALRNG
                     PAFGVERYRAAVAALVASSLVLSYNYGAFPRREGSFKAGFSRIEFSFTEDEWNRYQEL
                     LEITSIIPKDASLAATEKCGPHLSSRINMFTMRQGPQTAEWIVASSRELKLSKTRPTL
                     KEALESGKYGVVKRLDDFAVMKLGYSTAD"
BASE COUNT          549 a         1333 c         1194 g          666 t
ORIGIN      
        1 ctcggcgcgt acgaaaaacg agcccttcgc gtgttgttcg agctcgcgct ggtagcgggt
       61 cgccgccgta aaatcgcgct gatcgagcgc gaggccgcgc agcgaacgta agagtgactc
      121 tcgttcggtc ggatccgtcg agcgggcgag ggcttgctcg aagtgcgtac gcgccgctct
      181 gctgtcgccg cgctgctcgt aaaggtggcc gagcgcgagc tcggcggctg gattttttgg
      241 ttgttcggcc gaggcgcgcg cgtagctctc gatggcgcgc tcggggttgc cttcgagccg
      301 ctcgacagcg gccaggccga gcaaggcggc gtagcgctca ccgcccgtgc cggccgctcg
      361 ccgctcgagc tcggccatga gcgcatcgag cttgccgtcg cgctcgcgat agagctcgac
      421 gagacgctga atcggaaatt cggcgcccgg ctgcgcgagc gccgcgccga ggtaacgcgc
      481 gatcagcgct tcacggtcgc tggcgcgccg ttcggcggct tcgccggatt ccggcgtctt
      541 cggtcgagct gcttggtcgc tcggcgcgcg cgccggccgc ggtgtcgctc gggtcggagc
      601 gggcgccgtc ttcttcgtcc gaccgtgcgg attgaactgc gcctcggcct tgcccgcgct
      661 ggcgagaacc agcgccgccg aggccgtgag cagcgcgagg cgcatcccca caggttagcg
      721 ggtcctcctc gggggaccag ccacctcgac gagcctcact gcgtgaacgc ttgacacgcc
      781 acggcgcagg tatcgctgag gcagatggcc gcgtcgagcg ccacgaacgc gagcgaagta
      841 tccccgttga agcagccgag ccagcaggtg aacgctgcgg tgtcggtgcc tgcgcccgtg
      901 cacgatccca acccacaaaa aatgccctga gtgcacgcgg gcgtcgcgaa gcatttcgac
      961 gcactcgggc aacccgaagc cacgcacgcg aggcagtttt cgggtgaagc gcctgcgaag
     1021 ccgccgtcgg gcgcgcccgc gctattgccc gatccggaaa cgccgccact gcccgcgacg
     1081 ccgcctgtgg ccgcgacccc accggtgcca cccctgccac cagtgccgcc ccgggcgccg
     1141 gtgccgccgg tgccgccggt gttgccggtt ccaccgatgt tgctgccgcc ttgaccgctc
     1201 acgccgccga aagcaccgac gccgccgttc gcgccgacgc cgccgttcgc gccgacgccg
     1261 ccagtcgcgc cgacagcgcc ggtcgcaccg aagccgccca cgccgccgtc gagcccgcca
     1321 gtgccggcaa aggttccgcc gaccccgcca gttccgcccc tggcgcctgt gccgccgtgg
     1381 ccgcctgtac cagccgtcga accgccggtg ccgccggtcg ctccggacgt cgcgcccgcg
     1441 ccggccgggt cctcgaaaag gtcggagcgc ccgccgcaag caacggcaag cacgaccaga
     1501 ctcgagacca ccaaagctcg gcgcatctcc acattcgtag catcgatggg ttgggacgtc
     1561 ccgcggcgtt cgcgcgccgc gcggctttga tgtagaggag cctcaccatg agtggtccgt
     1621 cggaggccgg gtcgcccgag ccggctgcag caccagagcc cgcaagggag ccgatcgacg
     1681 gaaaggtgct cgatcccggg accgctgcgc acctcgacac acccgtcacc gaagcggatg
     1741 cacctggccc cgcgctgaac ggcgaagcgc cggccgtgcc cccgccgggc gtggaaccct
     1801 cagcggactc gagcgacacg gactcacgcg acgcgttgct cgttcacggt tcgcgcatcg
     1861 tggtgctcgc gacgctgctc ggcggggcga tcgctttttg gacgcaagtc gcctttcgct
     1921 cgccctggct cgacgcgttc ctgctcgaca acgagctcga gcccggcaag cgcgcgtcgc
     1981 tgctgctcgc gctcgtgggc ggcttcctcg tgggcggggt cgcggcgttc gtgggcatcg
     2041 agctctggcg tcgtcgttcg cggccgatcg tggagctcga gcaatgggcg tggttcctct
     2101 cgccgctctt gatgctgccg ctcgggccgg tgctgttccg gcccaaggtg tggatggggc
     2161 ggcacgacgt gctcttgccg agcctcgtgc tgatcttgct cgtcttcgag cagctcgcgt
     2221 tccgctgcct cacgaacgtg ccgcccgcag ctcacgcgtg gtgggccgaa gcggtcgagc
     2281 aattgcctgc gcgcctgcgc aagcacggtc ccctggtcat cgtcgtcgcc gccgcggcgg
     2341 gcttctccgc cttcttcatc ttttacacgc tcaggtggca ctacaagctg cggaccggca
     2401 actacgatct ctcgatcaac aacaatctca tgtacgaggg cttgcacggc aagttcctga
     2461 atagtccgct cgtcttcccg aaagatccgc cgaaatacct cgcgaatcac gtcaagctgg
     2521 gcgcgtattt gtttttgccg atctacgcgc tcttcccacg cgccgagacg ctgttcgtca
     2581 ttcaatcctt gttcatcggc tttggcgccg tgccgctgtt cttgttcgcg cgccgccacg
     2641 tctcggagtg gacggcggcg ctcgtgtgtc tcgcgtatct gtcgtactac ccgctccacg
     2701 gcgcgagctt ctcggagttc caagccgtgc cggtcgcggc gttcttcatc ttcctcgtca
     2761 tctgggcggc cgacaccagg cgctaccgct ggctcgcgtt cggcctcgtc gccgcgctct
     2821 tgatgcgcga ggacgtgtcc gtcggactcg ccgtcctcgg ggccttctac ctcctcacgg
     2881 ggtatcgccc cggcatcggc ctcgtgatgg cgctggcctc gacggcgtac ttcctgctcc
     2941 tgcgctttta cgtgatggac gccgccggca gctggtggtt ccccaacatg tacaaggagc
     3001 tctgggccga cggcgaaaag ggatttcgca gcgtcatcaa gacgatgctg accaatccca
     3061 tgttcacgct ctcgaagatc atcatcgaga agaagctcat ctacgtcttg cacctgctca
     3121 cgccgatcgt ctttttgccg gcgcgccgct ggtatctctg ggccgcattc ttgcccggcg
     3181 ccttcctcac gctgctcgtc acgaactacg acccacccat cacctattcg ttccactacg
     3241 tcatgcactg ggcgccgtac ctgttcgccg cgagcgtcat cacgctcgaa gcgctgagga
     3301 acggccccgc tttcggcgtc gaacgctacc gcgccgccgt ggcggcgctg gtcgcgagct
     3361 cgctcgtcct cagctacaac tacggcgcgt tcccgcgtcg cgagggcagc ttcaaggccg
     3421 gcttcagccg catcgagttc tcgttcacgg aagacgagtg gaatcgctat caagagctgc
     3481 tcgaaatcac gtccatcatt cccaaggacg cgagtctcgc ggcgacggaa aaatgcggac
     3541 cgcacctctc ctcgcgtatc aacatgttca cgatgcgtca gggcccgcag actgccgagt
     3601 ggatcgtggc ctcgtctcgg gagctcaagc tttcgaagac acgcccgacg ctcaaggaag
     3661 cgctcgagag cggcaagtac ggagtcgtca aacgcctcga cgacttcgcc gtcatgaagc
     3721 tcggttactc gacagccgac aa
//
LOCUS       DATIML010000731         1896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_442732, whole genome shotgun sequence.
ACCESSION   DATIML010000731 DATIML010000000
VERSION     DATIML010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442732"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..699
                     /gene="gspN"
                     /locus_tag="VLJ38_12595"
     CDS             <1..699
                     /gene="gspN"
                     /locus_tag="VLJ38_12595"
                     /inference="COORDINATES: protein motif:HMM:TIGR04411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspN"
                     /protein_id="HSU40406.1"
                     /translation="SLFSLLLGRRVVSFGAKAFGGSLDGSVADSDAERVLDLELDSLD
                     LGQTPVLAGLIGLPVSGKLSGTANLITPEAHLSKAEGKVSLKLAGLSVGDGKAKIRDI
                     IALPKLDAGELTLEAEVKSGQVNVTELAANGPDLQLNAQGTIRLRDQVDQSILSLSAE
                     FKFTDHYTNKDDMTRALFGPSGAFDLDAKNRRAKRPDGFYSWRVNGSLSNPIFFPSGG
                     AVPKKPGGLLHAPK"
     gene            complement(704..>1896)
                     /locus_tag="VLJ38_12600"
     CDS             complement(704..>1896)
                     /locus_tag="VLJ38_12600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40407.1"
                     /translation="AMLAAFSDLGEVYEQSGATDKSIDALEAAQTLDPENRERAEKLS
                     ALYATDPERYLDKAVAAQGVLLKQNPYRADSYKALRRLYTETRHADSAWCLCQALTLL
                     KLAEPDEERFFKRMRSDTAAMAQAALTDDDWLNLLTHQDVDPLLTAVFALIEPAVAVK
                     RGQALGELGYDETHVIDVSTHPAPVCQSLYYAAGVLGVPLPTIVENRGDRGGLGFVVA
                     REPVISLGRTALLADVPLRPAAFIAARQLAYVRPGSYLRHVLESGTALKSWLFAAIKL
                     TAPHFPVAAELEGAVAEAMRALDTGIQGPARDQLTRVVAKLLQSGTALDLKRWVSGLD
                     LTADRAGFLLTHDLETATTVIRASDEASSAVSHEDRFQELVLFSVSPAYFTLRERLGI
                     TVDA"
BASE COUNT          307 a          611 c          680 g          298 t
ORIGIN      
        1 tcactgtttt cgctgctgct cggccgccgt gtcgtaagct tcggcgcgaa ggccttcggc
       61 ggcagcctcg acggcagcgt ggccgactcc gatgccgagc gcgtgctcga cctcgagctc
      121 gacagcctcg atctcggcca aacgcccgtg ctcgcggggc tcatcggcct accggtctcc
      181 ggcaagctct cgggcacggc caacctgatc acgcccgagg cacacctgag caaagccgag
      241 ggcaaagtct ccttgaagct cgcgggcctc tcggtcggcg acggcaaagc caagatccgc
      301 gacatcatcg cgctcccgaa gctcgacgcc ggcgagctca cgctcgaagc cgaagtgaag
      361 agcggccaag tcaacgtgac cgagctcgcc gcgaacggcc ccgacctcca gctgaacgcg
      421 cagggcacga ttcgcctccg cgatcaggtg gaccagagca tcctgagtct ctcggcggag
      481 ttcaagttca ccgatcacta cacgaacaag gacgacatga cgcgtgcctt gttcggcccc
      541 tcgggcgcct tcgatctcga cgccaagaac cgccgcgcca agcgcccgga cggcttctac
      601 tcctggcgcg tcaacggctc gctcagtaac ccgatcttct tcccgagcgg cggcgccgtg
      661 ccgaagaagc cggggggctt actgcacgct ccgaagtaag cgctcaggca tcgacggtga
      721 tcccgagccg ctcccgcagc gtgaagtagg ccgggctcac gctgaagagc acgagctctt
      781 ggaagcgatc ctcgtgggac acggcgctcg aggcttcgtc ggaggcgcga atgacggtcg
      841 tcgcggtctc gagatcgtgg gtcaggagga agccggcgcg atcggccgtg agatcgaggc
      901 cgctcaccca gcgcttgaga tcgagcgccg tgccggattg gagcagcttg gcgacgacgc
      961 gcgtcagctg atcgcgggcg ggcccttgga tgccggtgtc gagggcgcgc atggcttcgg
     1021 cgacggcgcc ttcgagctcg gccgcgacgg ggaagtgcgg cgccgtgagt ttgatcgcgg
     1081 caaagagcca ggatttgagg gcagtgccgg actcgagcac gtggcggagg tagctgccgg
     1141 gccgcacgta ggcgagctgg cgcgcggcga tgaaggccgc ggggcgcagc ggcacgtcgg
     1201 ccaagagcgc ggtgcgtccg agcgagatca cgggctcgcg cgcgacgacg aagccgaggc
     1261 cgccgcggtc gccgcgattt tccacgatgg tcggcaaggg cacgccgagc acgcccgcgg
     1321 cgtagtagag gctttgacag acgggcgcgg ggtgcgtcga gacgtcgatg acgtgggtct
     1381 cgtcgtagcc gagctcgccg agcgcttggc cgcgcttcac ggcgacggcg ggctcgatca
     1441 gcgcgaagac ggcggtgagc agcgggtcca cgtcttggtg cgtgagcagg ttcagccaat
     1501 cgtcgtcggt gagcgcggct tgcgccatcg cggccgtgtc ggagcgcatg cgcttgaaga
     1561 aacgctcttc gtcgggttcg gcgagcttga gcagcgtgag cgcttgacac aaacaccacg
     1621 ccgaatccgc gtgccgcgtc tcggtgtata ggcgacgcag ggccttgtag gagtccgcgc
     1681 gataagggtt ctgcttgagg agcacgccct gggcggcgac cgccttgtcg aggtagcgtt
     1741 cggggtccgt agcgtagagc gcgctcagct tttcggcgcg ctcacggttt tccgggtcga
     1801 gggtctgggc ggcctcgagt gcgtcgatgc tcttgtcggt cgcgccgctc tgctcgtaga
     1861 cctcgccgag gtccgagaac gccgcgagca tggccg
//
LOCUS       DATIML010000732         3579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1889909, whole genome shotgun sequence.
ACCESSION   DATIML010000732 DATIML010000000
VERSION     DATIML010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3579
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889909"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="VLJ38_12605"
     CDS             complement(<1..807)
                     /locus_tag="VLJ38_12605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40408.1"
                     /translation="MHSVGLRAAAGLTLLAISSCFAGCTQELGARAAFAPLATPRRAP
                     PHTVAGVPVSDADYGQVVRWGADWFRYETFGGERAITDLIGFLEAPVRVPCDAAQGAK
                     ARCYREESALPYFIRALDELDGVRGNLYTGNGGFDGNGFTHDLTLRFPRGSTLYDLPL
                     PEEVHTGLDVEAGSAWPIGVSAVAVEGEDTKLPYVWHLAELGAGKVPGPAHVRVGITC
                     ALCHYSLDVDWDGKTDLKSAVLERVTPGSPYRPEDAWAVGNQDLKVGWLFS"
     gene            1034..1627
                     /locus_tag="VLJ38_12610"
     CDS             1034..1627
                     /locus_tag="VLJ38_12610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40409.1"
                     /translation="MQIGVWMQRGLALAAGLACCAFSRSARADGQDFHEDVRVPSVPA
                     WLTVPAELGHSAAWLRHSEGPAYRFRAALLPGVSAGSFGFHAALEAVYRNPEWDLGLG
                     GRLSFRVATLVGGFVPVRLLAEVTHLVVTTGGNASGGVQLGLGRLVHLAALYGHDTDR
                     PVNYFELRLGFDLASLWDPIGAVVRDVPQQDAVAGAR"
     gene            1646..3142
                     /locus_tag="VLJ38_12615"
     CDS             1646..3142
                     /locus_tag="VLJ38_12615"
                     /inference="COORDINATES: protein motif:HMM:NF015963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003885 - D-arabinono-1,4-lactone oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-arabinono-1,4-lactone oxidase"
                     /protein_id="HSU40410.1"
                     /translation="MKNPCAAPWINWSGTQEVYARRVERPTTLAGLQELVRDVSARRG
                     RLKAVATGLSFSDILQTEDTLVETTGLLGEPDTGALLPLEQELWHVPAHRTPLVRVAC
                     GARIRALNAALQQAGLAFTNLGGYDGQTLVGALSTSTHGSGLSLPPLSDAVRSFDLVT
                     ASGELLRLEPSRGLTDPTKFSHRYGNTRTLVQSDAWFWPAVVGLGCLGVVHSAVVAVS
                     PAYRLHERRRVRAWSSVESELRAGGVLRQFRNYEILINPYVRHDGDYSCLVTERNIAA
                     PDARRVPLPPERRSAESTTFLATSQTGVLELMNAEPRMIPGMLEAGLGALETGPEDHV
                     DESFLVYNVGRINTAHVVAGEYFFPLKDRTYLCAVRELLALVEKNRRRGIHQPTPFAL
                     RFVAGSRAPLSMARDEPHLTIELSLFRGSPRAAEALLSYERLCLALGGRPHWGQMHEL
                     TGEPGWLRRAYPRLDAFLTVFQNFNQSGVFNNHFTDRLGLSLPSGRLP"
     gene            3139..>3579
                     /locus_tag="VLJ38_12620"
     CDS             3139..>3579
                     /locus_tag="VLJ38_12620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40411.1"
                     /translation="MSGRLSRRELMRGGAGLAGLTLSEPTPALAAASYAPETVVLVQL
                     AGGADGASLLVPYTEERYYQARPTLALPPPGRSTHATLALDDRHALHPALRALEGLYH
                     AGELGFVVGVGMPALVRSHCDARRSLAASVTGLLGGRAPLRMHGA"
BASE COUNT          502 a         1279 c         1228 g          570 t
ORIGIN      
        1 cgaaaataac caccccactt tgaggtcttg attgccgacg gcccaggcat cctcgggacg
       61 gtaggggctg cccggcgtca cgcgctcgag caccgccgac ttgaggtccg tcttgccgtc
      121 ccaatcgaca tcgagcgagt agtgacagag cgcgcaggtg atgccgacgc gcacgtgcgc
      181 aggccccggg accttgcccg cgccgagctc ggccagatgc cacacgtacg gcagcttcgt
      241 gtcctcgcct tcgactgcca cggccgacac tccgatcggc caggccgagc ccgcttcgac
      301 gtcgagcccg gtgtgcactt cctccggcag cgggaggtcg tagagggtgc tgccgcgggg
      361 aaagcgcagc gtgagatcgt gcgtgaagcc gttgccgtcg aagccgccgt tgcccgtgta
      421 gagattgccg cgcacgccgt cgagttcgtc gagcgcgcgg atgaagtatg gaagcgccga
      481 ttcctcgcgg taacagcgcg ccttcgcccc ctgggccgcg tcgcagggaa cccgcactgg
      541 cgcctcgaga aagccgatca gatcggtgat ggcgcgctcg ccgccgaacg tctcataacg
      601 gaaccaatcc gcgccccagc gcacgacctg cccgtagtcc gcgtccgaca cggggacgcc
      661 ggcgaccgtg tgcggcggcg cacggcgagg cgtggcgagc ggcgcgaacg ccgcgcgcgc
      721 gccgagctcc tgggtacagc ctgcgaagca gctcgaaatg gccaacaacg tcagccccgc
      781 cgccgccctc aatccgaccg aatgcacgat cgtggtcctt ctactcgatt cgctatcaca
      841 cctcgcggcc ccgcggcacg ggtgtttgtc gcgccgggcc gcgagcgcac accccggcgc
      901 acccgagctg caccgcacgc gcacgctgag tatttgttga gcgggcgcgg gtgcgtggtc
      961 ggttcgtctt ctcccgcgcg gagcggcgtg agaaggttgg accctgttcg gcgcacagca
     1021 ccatcagcac atcatgcaga tcggggtttg gatgcagcgg ggcttggcgc tcgcggcggg
     1081 gcttgcgtgc tgcgcgttct cgcgctcggc gcgcgccgat ggccaggatt ttcacgagga
     1141 cgtgcgggtg ccgagcgtcc ccgcatggtt gaccgtgccc gccgagctcg gccacagcgc
     1201 cgcctggctg cgccacagcg agggtccagc gtaccgcttc cgcgcggcgc tgctgccggg
     1261 cgtcagcgcc ggatccttcg ggttccacgc ggcgctcgag gccgtgtatc gcaatcccga
     1321 gtgggatctc gggctcgggg gtcggctcag ctttcgcgtg gccacgctgg tgggcggctt
     1381 cgtccccgtg cggctgctcg ccgaggtcac gcacctcgtg gtcacgaccg gcggcaacgc
     1441 gagcggcggc gtgcagctcg ggctgggccg gctcgtgcac ctggccgcgc tctacggtca
     1501 cgacaccgat cgccccgtga actacttcga gctccgcctc gggttcgatc tggcttcgct
     1561 ctgggatccc atcggcgccg tcgtgcgcga cgtgccgcaa caagacgcgg tcgccggcgc
     1621 ccgttgaggt gatccggagc aggccatgaa gaacccgtgc gcggcaccct ggatcaattg
     1681 gagtggcacg caggaggtgt acgcgcggcg cgtcgagcgg ccgaccacgc tcgccgggct
     1741 ccaggagctc gtgcgcgacg tgagcgcgcg tcgtggccgc ctgaaggccg tcgccaccgg
     1801 gctttcgttc tcggacatcc tgcaaacgga ggacacgctc gtcgagacca ccgggctgct
     1861 cggtgagccc gacacgggcg cgctcttgcc gctcgagcaa gagctctggc acgttcccgc
     1921 gcaccgcacc ccgctcgtgc gcgtggcgtg cggcgcgcgc atccgggcgc tgaacgcggc
     1981 gctccagcaa gcgggcctcg cgttcacgaa cctcgggggc tacgacggcc aaacgctggt
     2041 cggcgcgctg tcgacgtcca cgcacggctc gggcctgtcg ctgccgccgc tgtccgacgc
     2101 cgtccgctcg ttcgatctcg tgacggcgag cggcgagctc ttgcgtctcg agcccagccg
     2161 cggcctcacc gatccgacga agttttcgca tcgctacggc aatacccgca cgctcgtgca
     2221 gtccgatgcc tggttttggc cggcggtcgt ggggctcggc tgcctgggcg tggtgcattc
     2281 cgcggtggtc gccgtgagcc ccgcttaccg actgcacgag cgacggcgcg tgcgcgcctg
     2341 gagcagcgtg gagagcgagc tgcgtgcggg cggtgtgctc cggcagttta gaaattacga
     2401 gatcctaatc aacccgtacg tgcggcacga cggcgactac agttgcctcg tcacggagcg
     2461 gaacatcgcg gctccggatg cgcgccgcgt gccgctgccg cccgagcggc gctcggccga
     2521 aagcaccacg ttcctcgcca cgtcacagac gggcgtgctc gagctgatga acgccgagcc
     2581 ccgcatgatc cccggcatgc tcgaggccgg gctcggggca ctcgagaccg gccccgaaga
     2641 tcacgtcgac gagagcttcc tcgtttacaa cgtcggccgc atcaacacgg cccacgtcgt
     2701 ggcgggcgag tacttttttc cgctcaagga tcggacgtac ctgtgcgccg tgcgcgagct
     2761 cttggcgctg gtcgagaaga atcgtcgacg cggcatccat caaccgacac cgtttgcatt
     2821 gcgcttcgtg gcgggctcgc gcgcgccgct ctcgatggct cgcgacgagc cccacctcac
     2881 gatcgagctg tcgctcttcc gcggcagccc gcgcgccgcc gaggcgctgc tttcgtacga
     2941 acggctgtgt ctggcgctcg gcgggcgccc gcactggggc caaatgcacg agctcacggg
     3001 tgagcccggc tggctgcggc gcgcgtaccc ccggctcgac gcgttcctca ccgttttcca
     3061 gaacttcaat caaagcggcg tgttcaacaa tcacttcacc gaccgtctcg gactgtcgtt
     3121 gccgtctgga aggctcccgt gagcggacgg ctctcgcggc gcgagctcat gcgtggaggc
     3181 gccgggctcg ccggcctcac gctcagcgag cccactccgg cgctcgccgc ggcgtcatac
     3241 gcccctgaaa ccgtcgtgct ggttcagctc gcaggcggtg ccgacggcgc gagcttgctc
     3301 gtgccgtaca cggaggagcg ctactaccag gcgcgcccca cgctcgcgct cccgccgccg
     3361 ggacgaagca cgcacgcgac gctcgcgctc gacgaccgtc acgcgcttca tcccgcgctg
     3421 cgcgcgctcg agggtcttta ccacgcaggc gagctcgggt tcgtcgtggg cgtcggcatg
     3481 ccggcgctcg tccgctcgca ttgcgatgca cggcgctcgc tcgcagcgag cgtcacgggg
     3541 ttgctcggcg gacgagcgcc gctccgaatg cacggcgcg
//
LOCUS       DATIML010000733         1910 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2751549, whole genome shotgun sequence.
ACCESSION   DATIML010000733 DATIML010000000
VERSION     DATIML010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1910
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2751549"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VLJ38_12625"
     CDS             <1..269
                     /locus_tag="VLJ38_12625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40412.1"
                     /translation="AATPVEALPVEALPVEAPKASAHPSAPVAPKPQVATKPAAPQAV
                     KSKPASAEAARHAEQKPKTPAKATGPAKPAAATAPAGTASFPLD"
     gene            complement(347..592)
                     /locus_tag="VLJ38_12630"
     CDS             complement(347..592)
                     /locus_tag="VLJ38_12630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40413.1"
                     /translation="MLERCLLPAALFFGCAPAVTLPVVAPAASPSAAAQAAVNVMSPA
                     RVHRGRHVARLSPPFAAAGGIRHVADSDAPTAVATTP"
     gene            complement(633..1499)
                     /locus_tag="VLJ38_12635"
                     /pseudo
     CDS             complement(633..1499)
                     /locus_tag="VLJ38_12635"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
BASE COUNT          338 a          636 c          675 g          261 t
ORIGIN      
        1 gtgcggcgac cccggtcgag gcgctccccg tcgaggcgct ccctgttgag gcgcccaaag
       61 ccagcgcgca cccgagcgca cccgtcgcgc cgaagccaca ggtcgcaacg aaacccgcgg
      121 cacctcaagc cgtgaaatcg aagcccgcga gcgccgaagc cgcgcgacac gcggagcaga
      181 aaccgaagac gcctgccaag gcgaccgggc ctgcgaagcc cgccgccgcg acggcacctg
      241 ccggcacggc gtcgttcccg ctcgactgac gcggacagcg ggcgcgtccc gatagacgag
      301 cctcgtactt gcgctgacgg tttcgcggaa cgcgtgacgg cgcgcgctaa ggcgtggtcg
      361 cgacggccgt cggggcatcg ctgtcagcga cgtggcggat gccgccggcc gccgcgaacg
      421 gcggcgaaag tcgcgcgacg tggcggcctc ggtgcacgcg cgccgggctc atcacgttca
      481 cggccgcctg cgccgcagcg ctcgggcttg ccgcgggtgc gacgacgggc agggtgacgg
      541 ctggggcaca gccgaagaac aacgcagccg ggagtaggca ccgctcgagc atgggtagga
      601 gagtgtaggt gtggaaggcg cgttagggaa aattacgcgc cgttcgcggg gccgtcacgg
      661 cgcggctcac cgcgtctatc gccgaagaag cgcagcatca cgtgcgcgag ctcttcgggg
      721 cgctcctctt gcggtaagtg cccggcgtcg atgagctcga ggcgagcgtc tttgatcgaa
      781 cgcgcgagcg ctcgggcggc cgcggccggc acgacgcggt cctcgttgcc cgaagcgacg
      841 agggtcggca agcggagccc actcgcacgc gtcgcgagct ggcgcgtgtc gccgagggcg
      901 cgcagcgttt cgtgtgcact cgtacgcgcg gagggttcgt cgaaggcggc gtagtaggcg
      961 tcgagcgtgg ccggcacgac gcggctcgcc ttggccacca gctgttcgcg gaagaaagcg
     1021 ccgaaaatgt ggcggttcca tagctgtttc agcacgaagc cgccgacgcc cggcaagacg
     1081 ccgagcctgc cgtaggcgcc gagccgcggc gactgacaga gcgcggacac gagcacgagc
     1141 tcggacacga gctcgggatg tcgcgcggcg agcgtgatcg cgatcgagcc gccgagacaa
     1201 tgaccgacga gcgtcgcgcg gccgagctcg agccccgcgt agagatccgc catgacttcc
     1261 gcgaactatt cgatggcgta aggaaagcga ctcgggtgtg gcttctcgct tgcgccgaag
     1321 ccgggcagat cgggcgtgac gacgcggtgc cggagcgcga gcgtcgtgcg caagccgttc
     1381 cacgtcgtgt tgtccagaaa caagccgtgc aagagtagga gcgtgggtcc ggagccggac
     1441 tccgcgacgc gcacgcgcac gccgcccgcc gtcacgtcgc gatagacgac ctccgacaca
     1501 gcgcgcagac tagtactcta agcgggaact tcggtgctgt ttcgtcgcag ccgggcttcc
     1561 ctgacacgaa ttcagggcgt ccggacggcc gaaccgcggc cgcgctcatg gacgacacat
     1621 cagctccatg gacaacctgt cggacatgac gaacaatgtc ctaggcggca cggcgcgcag
     1681 cttccatgga gctcccgagt aaatactgca aattttcggc tgcatccgct ttggtcgatc
     1741 cactgagtgg aatatattcc ctccacctcg cgagctcctg aagcgcgcgg gtcagaggag
     1801 ccacgtcacg tgccgatgga cgaacggatt ttgagcgcaa tcgaacgaga gagcccccgc
     1861 gggctcacct cggccgagat cctcgatctg ttcgcgcgcc acgacgtgcc
//
LOCUS       DATIML010000734         2991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_443016, whole genome shotgun sequence.
ACCESSION   DATIML010000734 DATIML010000000
VERSION     DATIML010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443016"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..603)
                     /locus_tag="VLJ38_12640"
     CDS             complement(43..603)
                     /locus_tag="VLJ38_12640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40414.1"
                     /translation="MTSTFARHATRLFLFAQLGTAAALLAGCDSDAHRVCTDITNCSH
                     GGSDDYVSACRDQVDDLSHEATRSGCDTTYDAYFSCAEDHFECTGNRATFPGCAATAD
                     ALDRCLDAGRANNACGELETRLAACAGTSAGAANDGPPSLQPCTAHGVCLARCYLDSL
                     ADVCAPAATELYAFSFCALSCEFSEF"
     gene            complement(618..1955)
                     /locus_tag="VLJ38_12645"
     CDS             complement(618..1955)
                     /locus_tag="VLJ38_12645"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HSU40415.1"
                     /translation="MSFARVRSAAGALAVTGAAWLTAPPASAADTTEPSDERVSLHFQ
                     AVAATQAHPAFSSAYSGQNSMTSVGESASAMVMNLALDVALWRGADVILNPEMSGGRG
                     LSRTLGVAAFPSGIVYRVGNPSPTIYLARLAFRQRFELGGGRVVDEPAANRLASTHDR
                     DTLTFSVGRLAVTDVFDGNRYAHDATTQFFDWALFASGAWDYPADTRGYTWGALSDLT
                     VGDFSLRSGIALLPKYGNLLEMEWNLAKARALMLEGEVRYRVAGRPGSVRVLGFVNQA
                     RMGNYRMATEDPAAGLDVTATRLDGRKKYGAGISADQELTSSLGVFLRASINDGNNET
                     WAFTEIDRSLAFGVVQSGAPWKRPDDEAGAAFVTDGIAPWHRRYLAAGGYGFLLGDGA
                     LNYGPEFEGDFYYRAQVTQYIQFSGVYQPIVNPGYNRDRGPVHVFSGRLHVAF"
     gene            2043..2741
                     /locus_tag="VLJ38_12650"
     CDS             2043..2741
                     /locus_tag="VLJ38_12650"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HSU40416.1"
                     /translation="MLTLRPAAERGHENHGWLDSWHTFSFADYYDPAHMGFRALRVIN
                     EDRVEPGHGFGTHGHREMEIISYVLEGALRHDDSTGVGSVIRPGDVQRMSAGSGVRHS
                     EKNLSASEPVHFLQIWILPALHGIAPSYEQKSFADADKRGRLRLVASREGRDGSVTVH
                     ADASLYAGSFDAGESAELELSPTRHAWVQVARGRAKVNGSELGPGDGAALSDESKLRI
                     EGVANAEVLVFDLA"
     gene            complement(2749..>2991)
                     /locus_tag="VLJ38_12655"
     CDS             complement(2749..>2991)
                     /locus_tag="VLJ38_12655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40417.1"
                     /translation="VTSTKAMVQRLGFKRWKSLHRSVYLIAALGALHFYWRVKKDTRE
                     PLAYAGVIGLLLLVRLVGTLKARSGRARGALATPSR"
BASE COUNT          526 a          989 c         1005 g          471 t
ORIGIN      
        1 catgcgccgc cgcccgatgc cgaattcgat gcaagcctcg cgtcagaact cagagaactc
       61 gcagctcagg gcgcagaagc tgaacgcata gagctcagtg gcagccggcg cgcacacgtc
      121 cgcgagcgaa tccaggtagc accgcgccaa gcagacgccg tgcgccgtgc atggttggag
      181 ggacggcggc ccgtcgttgg ccgcgccggc tgacgtgccg gcacacgccg cgagacgcgt
      241 ctcgagctcg ccgcacgcgt tgttcgctcg acccgcgtcc aggcagcgat cgagtgcgtc
      301 tgccgtcgcc gcgcagcccg gaaacgtggc tctgttgccc gtgcactcga agtggtcttc
      361 ggcgcacgag aagtacgcgt cgtaagtggt gtcgcagcct gaacgggtcg cttcgtgcga
      421 cagatcgtcc acctggtcgc ggcaagcgct cacgtagtcg tcgctaccgc cgtgcgaaca
      481 attcgtgatg tccgtgcaca cccgatgcgc gtcggagtcg caaccggcga ggagcgcggc
      541 cgcggtgccg agttgcgcga aaagaaatag gcgcgtggcg tggcgggcga aagtgctggt
      601 catgggccgg cggtccgtca aaaggcgacg tgcaggcggc cggaaaacac gtggaccgga
      661 ccgcgatccc gattatatcc cgggttcacg atcggctggt acacgccaga aaactgaatg
      721 tattgcgtga cttgggcgcg atagtaaaaa tcgccttcga actccggtcc gtaatttagg
      781 gcgccgtccc cgagcaagaa gccgtagccg cccgcggcga gatagcggcg gtgccagggc
      841 gcgatgccgt ccgtcacgaa cgcggcgccg gcttcgtcgt ccgggcgctt ccagggcgcc
      901 ccgctttgca cgacaccgaa cgcgagcgaa cggtcgatct cggtgaacgc ccacgtttcg
      961 ttgttgccgt cgttgatgct cgcgcgcagg aagacgccga gcgagctcgt gagctcctga
     1021 tcggcgctga tgccggcgcc gtacttcttg cggccgtcga ggcgcgtcgc cgtcacgtcg
     1081 agtccggcgg cgggatcctc cgttgccatt cggtagttgc ccatgcgcgc ctggttcacg
     1141 aagccgagca cccgcacgct gcccggccgt ccggcgacgc gataacgcac ctcgccctcg
     1201 agcatgagcg cgcgcgcctt ggcgaggttc cactccattt cgagcaagtt gccgtacttc
     1261 ggcagtagcg cgatgcccga acgcagcgag aaatcaccga ccgtcaaatc actcagcgcg
     1321 ccccaggtgt aaccgcgcgt gtcggcgggg tagtcccacg cgcccgaggc gaacagcgcc
     1381 caatcgaaga actgcgtcgt cgcgtcgtga gcataacgat tgccgtcgaa cacgtccgtg
     1441 acggccagtc gccccacgct gaacgtgagc gtgtcgcgat cgtgcgtgct cgcgaggcga
     1501 ttggctgcgg gttcatcgac gacgcgcccg ccgccgagct cgaaacgctg ccggaacgcg
     1561 agccgtgcga ggtagatggt cgggctcggg ttgccgacgc ggtacacgat cccgctcgga
     1621 aacgcggcga cgccgagcgt ccggctcaag ccgcgtccgc cgctcatttc gggattcaag
     1681 atcacgtccg cgccgcgcca aagcgccacg tcgagcgcca gattcatgac catggccgac
     1741 gcggactcgc ccacggaggt catgctgttt tggccggaat aggcggacga gaacgcggga
     1801 tgcgcttgcg tggcggcgac cgcctgaaaa tggaggctca cgcgctcgtc gctcggctct
     1861 gtcgtgtccg ctgcgctcgc gggcggagcc gtgagccagg ccgcacccgt gaccgcgagc
     1921 gcgccggcag cgctacgaac cctggcgaaa gacatcaagc cggcgcggca ttaagccgaa
     1981 cggcccccgg cggcaagctt tcccctcgcg aagacatggc gaagtggtgc taggaagttg
     2041 ccatgttgac gctccgcccg gccgccgagc gcggccacga aaatcacggc tggctcgatt
     2101 cctggcacac gttctcgttc gccgattact acgatccggc gcacatgggc tttcgcgcgc
     2161 tgcgcgtgat caacgaggat cgcgtcgaac ccggtcacgg cttcggcacc cacggccacc
     2221 gcgagatgga aatcatctcg tacgtgctcg aaggcgctct gcgccacgat gactcgacgg
     2281 gcgtcggctc cgtgattcgc ccgggcgatg ttcaacgcat gagcgccggc tcgggcgtgc
     2341 gtcatagcga aaagaatctt tcagcgagcg agccggtgca cttcctccaa atctggattt
     2401 taccggccct ccacggcatc gcgccgagct atgaacagaa gagcttcgca gacgccgata
     2461 aacgcggccg cttgcgtctc gtcgcatcgc gcgagggacg cgacggcagc gtgacggtgc
     2521 acgcggacgc gagcctctac gcgggtagct tcgacgccgg ggagtccgcc gagctcgagc
     2581 tttcgccgac gcgccacgcg tgggtacaag ttgcgcgcgg tcgcgccaaa gtgaacggta
     2641 gcgagctcgg acccggtgac ggcgccgcgc tgagcgacga atcgaagcta cgcatcgaag
     2701 gcgtcgccaa cgcggaagtc ctcgtcttcg atctggcttg agagctgctc agcgggacgg
     2761 cgtcgcgagc gcaccgcgag cgcgaccgct gcgtgccttg agcgtgccga ccagccgcac
     2821 gagcaacaag agtccaatca cgccggcgta ggcgagcggt tcgcgcgtgt ccttcttgac
     2881 gcgccaataa aagtgcagcg cgccgagcgc ggcgatcagg tagacgctgc ggtgcaggga
     2941 cttccagcgc ttgaagccga gcctttgcac catcgctttc gtggaggtga c
//
LOCUS       DATIML010000735         2116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3905154, whole genome shotgun sequence.
ACCESSION   DATIML010000735 DATIML010000000
VERSION     DATIML010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3905154"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /locus_tag="VLJ38_12660"
     CDS             <1..500
                     /locus_tag="VLJ38_12660"
                     /inference="COORDINATES: protein motif:HMM:NF017855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF938 domain-containing protein"
                     /protein_id="HSU40418.1"
                     /translation="ALHFARELPGWTIQPSDCDPEHLETLRRRVALAAHPRLLAPLVL
                     DVTAQPPACEPSAIFCANMLHIAPWSACAGLFDVAARLLPPAGPLVTYGPYAVHGEHT
                     AESNARFDASLRERNAAWGVRDVDAVLEVAQARGFALEATHAMPANNLLLVWRRPANG
                     EPRSS"
     gene            505..1629
                     /locus_tag="VLJ38_12665"
     CDS             505..1629
                     /locus_tag="VLJ38_12665"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HSU40419.1"
                     /translation="MAPSLDELRRFALRRSLFTQATLERALETLGFVQADPIRAPARA
                     QDLILMQRVRDYRAGELERRYESLEVEEDFFINYGFLAREAHALMHPRSGLERYTRAR
                     ERLAERVLEFVQQQGSAHPRDVERALGSGTEKNYWGGLSNVTTRLLDGLHYRGLLRVA
                     RREGGIRVYAPARPHRVPEPGDEAERLDALIDLVVQKYAPLPASSLAYAVNRLRYAAP
                     QWQPELKAGLKRARERLGHTEAAGHEWYWPAAEQLASRRRGSASDEPVRLLSPFDPVV
                     WDRRRFELFWGWQYRFEAYTPVAKRKLGYYALPLVWDARAVGWANLSFVDGRLTASFG
                     YTEPKLAKDPAFRRALDAELARFERFLTPRRASERSSRPR"
BASE COUNT          324 a          754 c          705 g          333 t
ORIGIN      
        1 acgcgcttca ttttgccagg gagctgcctg gctggacgat tcagccgtcc gattgcgatc
       61 ccgagcacct cgagacgctg cgacgccggg tggcgctcgc agcgcacccg cgcctgctcg
      121 cgccgctcgt gctcgatgtg acggcgcagc ccccagcctg cgagccgagc gcaatctttt
      181 gcgccaacat gctgcacatc gcgccctggt cggcgtgcgc cggcctgttc gacgtggcgg
      241 cgcgcctact gccgcccgca ggcccgctcg ttacgtatgg tccttacgcc gtgcacggcg
      301 agcacacggc cgaaagcaac gcgcgcttcg atgcttcgct ccgcgaacga aacgcagcgt
      361 ggggcgtgcg cgacgtggac gccgtgctcg aggtcgcgca ggcgcgcggc ttcgcgctcg
      421 aagcgacgca cgccatgccc gcgaacaacc tcttgctcgt ctggcggcgc cccgccaacg
      481 gggagccacg ctcgagttag cgtcatggca ccgtcgctcg acgagctccg tcgtttcgcg
      541 ctgcggcgca gcctgttcac gcaggcgacg ctcgagcgcg cgctcgaaac gcttggtttc
      601 gtgcaggcgg accccattcg cgcgcctgcg cgagcccagg atttgatcct gatgcagcgc
      661 gtgcgcgact accgcgcggg cgagctcgaa cgacgttacg agtcgctcga ggtagaagag
      721 gatttcttca tcaactacgg ctttctcgcg cgggaggcgc atgcgctcat gcaccctcgc
      781 tcggggctcg agcgctacac gcgtgctcgc gagcgccttg cagagcgcgt gctcgagttc
      841 gtgcagcagc agggcagcgc ccacccgcgt gacgtcgagc gagcactcgg gagcggcacc
      901 gagaaaaact actggggcgg tctctcgaac gtcacgacgc gcctgctcga cgggctgcac
      961 taccgcgggc tattgcgcgt cgctcggcgt gaagggggca ttcgcgtgta cgctccggct
     1021 cgcccgcatc gcgtgcccga gcccggcgac gaagccgaac ggctcgacgc gctgatcgat
     1081 ctcgtcgtgc aaaagtacgc gccgctgccg gcctcgagcc tggcctacgc cgtgaaccgc
     1141 ctgcgctacg cggcgccgca atggcaacct gagctcaagg ccggtttgaa gcgcgctcgc
     1201 gagcgcctcg ggcacacgga agccgccggt cacgagtggt attggcccgc cgccgagcag
     1261 ctcgcttcgc gacgccgggg gagcgcctcg gacgaacccg tgcggctgct ctcgccgttc
     1321 gaccctgtcg tgtgggatcg caggcgcttc gagctcttct ggggctggca gtatcgcttc
     1381 gaggcgtaca cgccggtcgc caagcgcaag ctcggttact acgcgctgcc gctcgtttgg
     1441 gacgcgcgcg ccgtcggttg ggccaacctg tcgttcgttg acggacgact cacggcgagc
     1501 ttcggctaca cggagccgaa actcgcgaag gatcccgcgt tccggcgcgc gctcgacgcc
     1561 gagctcgcgc gtttcgagcg ctttctcacg ccccggcgag cgtccgagcg ctcgagccgt
     1621 ccccgctaaa gacgggacca gacgggacgc agcacgtaaa aatgaccagc tgacgcgcgt
     1681 tgcgcccgct cgtgtgcctc gtgtaccgtc ttacgtcaga acgggagtac gaatggacac
     1741 catcgcaagc aagttcgggt gggtacgatg gctcgcggct ggcctcgtga tcgcggccgc
     1801 cgcagtagcg tgcggcggca cggcagccgg cggcgggaaa ggctcgatcg cgccggagcc
     1861 gtccgcgagc gccccggcgg acagcgcgtc acccggcacg gacgcgtcgg cagcggcgcc
     1921 cgccacaccc cactgacctg cggcccatcc cacgacgaga gcgctaacga tggcccaaac
     1981 caacccgatg accgcttcga tcagctttca cggcaacgtc gcctgcggcg gcgctacctc
     2041 gctgatcctc aaagacgacg ggacttgcat cttccacggt cacttccacg acgcggggtt
     2101 cgtcccttac ggcgtc
//
LOCUS       DATIML010000736         4257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4485195, whole genome shotgun sequence.
ACCESSION   DATIML010000736 DATIML010000000
VERSION     DATIML010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4257
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4485195"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..749
                     /locus_tag="VLJ38_12670"
     CDS             <1..749
                     /locus_tag="VLJ38_12670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU40420.1"
                     /translation="ADLKVAEANVNAQQANIRRISDLKSFARVTAPFAGTITERTIDR
                     GSLVSAGGTATPLFRLAATQIVRVFVQVPQDAAPSIVLNASAELTIREFPNEKFHGTV
                     ARTSGALDQATRTLSTEVRVPNADGRLLSGMYAEVRITLPSARRVFELPATVLMNDAQ
                     GLRIGVVDANNRVHLQPIVLERDLGSTVHIASGIDGTERVVQVPGPELAEGEAVDATA
                     AKVPPPTPSSSVAVTGALGTAPQPVASAPR"
     gene            766..1830
                     /locus_tag="VLJ38_12675"
     CDS             766..1830
                     /locus_tag="VLJ38_12675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40421.1"
                     /translation="MRASTLLSSPVSFGDFLLRLGFFALAPVGIVLAAELFPVRGALI
                     DVGLALSVFVAGEAARSVAKRSRLATFFLKEALAFEGYYREKPPRRFVYYFFYPFLFP
                     YWLSNREARREFLMFRGYTLGSLLILLLSFAWQYRRDYLPELGMRRFLPAVAISLVVE
                     TLLVLSLLMPIATTVVWYHASFRRRRLVVVLLAGLVSTAAVTYRVSSHRDPVVSYFTR
                     KRVAWRTSAARHRAHAALLDGVMTAWNDMYRLRTKGPGVEQDGKVEGVPLDDARKKLD
                     AFYKPDEAFAFDLWASPKRHPRLIVLYSEARSGRPPIWVALENGAEIRHTASLPKGAL
                     DAMKQAADTSDALGMIWEED"
     gene            2124..2684
                     /locus_tag="VLJ38_12680"
     CDS             2124..2684
                     /locus_tag="VLJ38_12680"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSU40422.1"
                     /translation="MREILAATEEILVENGVEHATMAKIAERAGVAVGTLYNRFTDRD
                     ELIEVLLAERRGDLLRQLDETMHALEHAGFREQLVGFFTTLFTHMAQHRPFLKLVFAR
                     EIGGQEGRERMSREMFARLDSILKRGHREKLLRRDGDHCFALTLFWSAKGTLARDDQG
                     LAPLPPAQAARSVVSLFLDGAAREER"
     gene            2681..>4257
                     /locus_tag="VLJ38_12685"
     CDS             2681..>4257
                     /locus_tag="VLJ38_12685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSU40423.1"
                     /translation="MSSSPKPPVNKWLVAISVTFGTLMGTIDASIVNVATPHLRGAMG
                     ATVQEITWVTTGFVIANVVVMPLTAFFGRFFGQKRVYQSALVLFVIGSGLCGLARSLE
                     ALVAFRLVQGLGAGALQPTEQAILRQTFPPKEQGMAMALYGVAVVIGPAFGPTIGGYI
                     VDNFSWEWIFYINLPVGALALFMVHRFVYEPEDIRLNNLAMAEKQRKHLDWQGIALLT
                     TGVATLQYVLEEGQKNDWFDSKEITYVTFVAAVAIAAFVIRELTATVPAVNISLFKEP
                     VFASGTLVGAVMFAMLLSLTFLLPVFMQELLGFTAVQAGLALMPRSLVMMVTMPIIGR
                     VYNKVSPRAFVAFGVLLFCWSAWLMSHYTLDTTSRDVVLVLAIQGVAFACLFIPLTTV
                     ALSRIPRHLLADATGLNSLLRQIGGSLGLAIFASLIPRISKFSSTALSTHVTADRPEV
                     TERFAMLTSAFERGGYDAASARLAAGRVIGGIVARQSMVITFERLFLLSGFLFLLVLP
                     LLYFLKSPDHGPQQAAPG"
BASE COUNT          637 a         1413 c         1417 g          790 t
ORIGIN      
        1 cggccgatct caaggtcgcc gaggcgaacg tgaacgccca gcaagcgaac atccgccgca
       61 tcagcgacct caaatcgttt gcgcgcgtga cggcgccgtt tgcgggcacc atcacggaac
      121 gcacgatcga tcgcggtagc ctcgtgtcgg cgggcgggac ggcgacgccg ctcttcaggc
      181 tcgctgcgac ccagatcgtg cgcgtgttcg tgcaggtgcc gcaggacgcg gcgccgagca
      241 tcgtgctgaa cgcgtccgcc gagctcacga tccgcgagtt cccgaacgag aagttccacg
      301 gcacggtcgc gcggacctcg ggggcgctcg atcaggcgac gcgcacgctc agcacggagg
      361 tgcgcgtgcc gaacgccgac ggccggctgc tctccggcat gtacgccgaa gtgcgcatca
      421 cgttgccctc ggcgcgtcgc gtgttcgagc tgcccgcgac cgtgctgatg aacgacgccc
      481 aggggctgcg tatcggtgtc gtcgacgcga ataaccgcgt ccacctgcag cccatcgtgc
      541 tcgagcgcga cctcggttcg accgtgcaca tcgcgagcgg catcgacggg acggagcgcg
      601 tcgtgcaggt gccgggaccc gagctcgcgg agggtgaagc ggtcgacgcc acggccgcaa
      661 aggtgccgcc gccgactccg tcgagctccg tcgcggtgac gggcgcgctc ggaacggcgc
      721 cgcaaccggt ggcttcggcg ccacgctgat agagttcacg cccgcatgcg ggcctcgacg
      781 ctgctctcct caccggtctc gttcggcgat ttcctgctcc ggctcggctt cttcgcgctc
      841 gcgcccgtcg gcatcgtact cgcggccgag ctctttcccg tacgcggcgc cctcatcgac
      901 gtggggctcg cgctctccgt cttcgtcgct ggcgaagcgg cgcggagcgt cgccaagcgc
      961 tcgcgcctgg ccactttctt cttgaaggaa gcgctcgcgt tcgaggggta ctaccgcgag
     1021 aagccgccgc gccgcttcgt ctactacttc ttctacccgt tcttgttccc gtactggctt
     1081 tcgaaccgcg aggcgcgccg cgagttcttg atgttccgcg gctacacgct cggttcgctc
     1141 ctgattttgc tgctctcgtt cgcctggcaa taccgccgcg attatttgcc cgagctcggc
     1201 atgcggcgat tcttgcccgc ggtcgcgatc tcactcgtgg tcgagacctt gctcgtgctc
     1261 tcgctcttga tgccgatcgc gacgacggtc gtctggtacc acgcgagctt tcggcgccgg
     1321 cgcctggtcg tcgtgttact cgccggtctc gtctcgacgg cggccgtgac gtatcgcgtc
     1381 tcgagccacc gcgatccggt cgtttcctac ttcacgcgca aacgcgtggc gtggcgcacg
     1441 tccgccgcgc gccaccgcgc gcatgccgca ctcctcgacg gcgtgatgac ggcttggaac
     1501 gatatgtatc gcttgcgcac gaaaggcccc ggggtcgaac aggacggcaa agtcgagggc
     1561 gtgccgctcg acgacgcgcg caagaagcta gacgccttct acaagccgga cgaggcgttc
     1621 gcgttcgatc tatgggcgag cccgaagcgt cacccgcgct tgatcgtgct ctatagcgaa
     1681 gcgcgctccg gccgcccgcc catctgggtc gcgctcgaaa acggcgccga gattcgtcac
     1741 acggcctcgc tgccgaaggg agcactcgac gccatgaagc aagcggccga cacgagcgac
     1801 gcgctcggca tgatttggga agaggattga ggaggagtac ggccgcggag gcagactgaa
     1861 gcaatccgcc ccggggcgga ctcggggggg cggcgcgagg agggccgtag gcccgctctg
     1921 ttgtggttgg aacgcagctg gtgcgaccgg cgctgccgtg ccggcgcgag acggcttgac
     1981 cccgggtgcg ccggccccaa aaaactcccg tgcagccgct tgacgctcct tcaaccgata
     2041 ctatctacct ctacaaagtg aacgaggatt cagaaaatgc acgcggacgt cagcggctga
     2101 gggatcggct gcgggaggcg accgtgcgcg agatcctcgc ggcgaccgag gaaatcctgg
     2161 tggagaacgg cgtcgagcac gcgacgatgg ccaagatcgc cgagcgcgcc ggcgtcgcgg
     2221 tcggcacctt gtacaaccgc ttcaccgatc gggacgagct catcgaggtg ctgctcgccg
     2281 agcgccgcgg cgatttgctg cggcagctcg acgagaccat gcacgccctc gagcacgcgg
     2341 ggttccgcga acagctcgtg gggtttttta cgacactgtt cacgcacatg gctcagcacc
     2401 gcccgttttt gaagctcgtg ttcgcacggg agatcggcgg ccaagaaggc cgcgagcgca
     2461 tgtcgcgcga gatgttcgcg cgcctcgaca gcatcctcaa gcgcggccac cgggaaaaac
     2521 tcttgcgacg cgacggtgat cattgcttcg cgctcacgct gttttggtcc gccaagggca
     2581 cgctggcgcg cgatgaccag gggctcgcgc cgcttccgcc cgcacaggca gcgcgttcgg
     2641 tggtaagcct gttcctcgac ggagcggctc gggaggaacg atgagcagtt cgccgaaacc
     2701 tcccgtcaac aagtggctcg tcgcgatctc ggtgacgttc ggcacgctca tgggcacgat
     2761 cgatgcttcg atcgtgaacg tggcgacgcc gcacttgcgc ggcgccatgg gcgcgaccgt
     2821 gcaggagatc acgtgggtga cgaccgggtt cgtgatcgcc aacgtggtcg tgatgccgct
     2881 cacggcgttt tttggccggt ttttcgggca gaaacgcgtg tatcagtccg cgctcgtgct
     2941 gttcgtgatc ggctcggggt tgtgcggcct ggcgcggagc ctggaggcgc tcgttgcgtt
     3001 tcgcctcgtg caagggctcg gtgccggcgc gctccagccg accgagcagg cgatcttgcg
     3061 ccagacgttc ccgcccaagg agcagggcat ggcgatggcg ctctacggcg tcgcggtcgt
     3121 gatcggtcct gccttcggtc ccacgatcgg cggatacatc gtcgataact tcagctggga
     3181 atggatcttc tacatcaacc tgcccgtcgg cgcgctcgcg ctcttcatgg tgcatcgctt
     3241 cgtctacgag cccgaggaca tccgcctgaa caacctcgcg atggcggaga agcagcgcaa
     3301 gcacctggac tggcagggca tcgcgctcct cacgacgggc gtcgccacgc tgcagtacgt
     3361 gctcgaagaa ggtcagaaga acgactggtt cgactcgaag gagatcactt acgtcacctt
     3421 cgtcgcggcg gtggcgatcg cggcgttcgt catccgcgag ctcaccgcta cggtgcccgc
     3481 cgtcaacatc tcgctcttca aagagccggt gttcgcctcc ggcacgctcg tcggcgcggt
     3541 gatgttcgcg atgctcttgt cgctgacgtt ccttttgccg gtgttcatgc aggaactctt
     3601 gggcttcacg gccgtgcagg cgggcctcgc gctcatgccg cgctcgctcg tgatgatggt
     3661 gacgatgccg atcatcgggc gcgtctacaa caaggtctca ccgcgggcgt tcgtggcgtt
     3721 cggcgtgctg ctcttctgct ggagcgcctg gctcatgagt cactacacgc tcgatacgac
     3781 ttcgcgcgac gtggtgctgg tgctcgcgat tcagggcgtc gccttcgcgt gcttgttcat
     3841 tccgctcacg accgtggcgc tgagccgcat tccgcgtcac ttgctggcgg acgccaccgg
     3901 gctcaattcg ctgctgcgtc agatcggcgg ctcgctcggg ctcgcgatct tcgcgtcgct
     3961 gattccgcgc atctcgaagt tcagcagcac cgcgctgtcg acgcacgtca cggccgaccg
     4021 tccggaggtg accgagcgct tcgcgatgct gacgagcgcg ttcgagcgcg gcggctacga
     4081 cgcggcgtcg gcgcgactgg cggcgggccg cgtgatcggc ggcatcgtgg cgcggcagtc
     4141 gatggtgatc accttcgaac gtctgttcct gctctccggg tttctattct tgctcgtgtt
     4201 gccgttactc tatttcttga agtcgcccga tcacgggccg cagcaggcgg cacccgg
//
LOCUS       DATIML010000737         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3044450, whole genome shotgun sequence.
ACCESSION   DATIML010000737 DATIML010000000
VERSION     DATIML010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044450"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VLJ38_12690"
     CDS             <1..414
                     /locus_tag="VLJ38_12690"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HSU40424.1"
                     /translation="MGPGGMGPGEHGMGPGMHGGPVEMLGQELSLTDDQKEKLRTKLD
                     ALRKSREGEMKSKMQAGQKHVDAVLDAFAGDKFDAKKAGVGTQGPEMVKAMAKARVEF
                     VQTVLGVLTPEQRPKFAEHIRAHADDPDAPPPSGG"
     gene            420..1397
                     /locus_tag="VLJ38_12695"
     CDS             420..1397
                     /locus_tag="VLJ38_12695"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HSU40425.1"
                     /translation="MAARKTKSAPKKPGTRQRRGVRLKPTELTAAELAVVPEAGALDA
                     LAAQVVADGGAVLARYREPLGGNSLLFVALPLERVAPTPFQRDVSDAHVRRLTRAMDK
                     TKRFLDPIIAVAADGKYWTPNGNHRLTALRELGASSIVALLVPEREVAYQILALNIEK
                     AHALRERALEVSRMYRELVKLSDEGESHFELEFEEPALVTLGFAYAARGRLAGGAYHP
                     ALRKVDAWLAGKLASSLEERERRAQAVLALDDAVNEAVAKLKERGLTSPYLKNFVVSR
                     VNPLRFIKGDPPSFDELLETMTKRARGFKVDKIKNEDLASAGGPLEDAD"
     gene            complement(1436..>2118)
                     /locus_tag="VLJ38_12700"
     CDS             complement(1436..>2118)
                     /locus_tag="VLJ38_12700"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSU40426.1"
                     /translation="ALFAAVGTAGQRCTSLRRLIAHERIADELLARLLRAYERVPVGD
                     PRASGTLMGPLIDHGALDAMQRALATAREQGGRVHGGQIVTSGVPAGGAYVRPALVEI
                     DPSAPIVAEETFAPILYFSRYATLDEAIALQNGVPQGLASAIITDDLREAERFCGPSG
                     SDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKNYMRRATNTVNYGDDLPLA
                     QGIRFELD"
BASE COUNT          352 a          723 c          735 g          308 t
ORIGIN      
        1 atgggtcctg gtggcatggg tcccggcgag cacggcatgg gccccggcat gcacggcggt
       61 cctgtggaga tgctcggaca agagctctcg ctcaccgacg atcagaaaga gaagcttcgc
      121 accaagctcg acgctctgcg caaatcgcgc gagggggaga tgaagtcgaa gatgcaagcc
      181 gggcagaagc acgtcgatgc cgtgctcgac gcgttcgccg gtgacaagtt cgacgccaag
      241 aaggcgggcg tcggcacgca aggaccggag atggtcaagg cgatggcgaa ggccagggtc
      301 gagttcgtgc agacggtgct cggcgtgctc acccccgagc aacggccgaa gttcgccgag
      361 cacattcggg cgcacgccga cgatccggac gcaccgccgc cgagcggggg ctgagtcccg
      421 tggccgcccg caagacgaag agcgctccca agaagcctgg cacgaggcaa cgccgtggcg
      481 ttcgcctgaa gccgaccgag ctcacggcgg ccgagctcgc ggtcgtgccc gaggcgggag
      541 cgctcgacgc gctcgcggcg caagtcgtcg cggacggcgg cgccgtgctc gcgcgctatc
      601 gcgagccgct cggcggcaat tcgctgttgt tcgtggcgtt accgctcgag cgcgtcgctc
      661 ccacgccgtt tcaacgcgac gtgagcgacg cgcacgtgcg gcgcctcacg cgcgcgatgg
      721 acaagacgaa gcgcttcctc gaccccatca tcgccgtggc cgccgacggc aaatactgga
      781 cgcccaacgg caatcatcgc ctcacggcac tccgcgagct cggggcctct tcgatcgtcg
      841 ccctgctcgt gcccgagcgc gaagtcgctt accaaatcct cgcgctcaat atcgaaaagg
      901 cgcacgccct gcgcgagcgg gcgctcgagg tttcgcgcat gtaccgcgag ctcgtgaagc
      961 tctccgacga gggcgagagt cacttcgagc tcgagttcga ggagccggcc ctcgtgacgc
     1021 tcggtttcgc ctacgccgcg cgcgggcggc tcgcgggcgg cgcttatcat cccgcgctac
     1081 gcaaagtgga cgcttggctg gcaggcaagc tcgcgagctc gctcgaagaa cgcgagcggc
     1141 gcgcccaagc cgtgctcgcg ctcgacgacg ccgtcaatga agccgtcgcc aagctcaagg
     1201 agcgcggcct cacgagcccc tacctcaaaa atttcgtcgt ttcgcgcgtg aacccgctgc
     1261 gcttcatcaa gggggaccca ccgagcttcg acgagctgct cgagacgatg accaagcgcg
     1321 cccgcggctt caaggtcgac aagatcaaga acgaggacct ggcgagcgcg ggcggcccgc
     1381 tcgaagacgc ggactgacgc gccctgcggc gtcgtgcggc gccgtcacgg cgagctcagt
     1441 cgagctcgaa gcgaatgccc tgcgcgagcg gcagatcgtc gccgtagttc acggtgttcg
     1501 tcgcacgccg catgtagttc ttccacgcgt cggagccgga ttcgcgcccg ccgcccgtct
     1561 ctttttcgcc cccgaacgcg ccgccgattt ccgcgccgct cgtgccgatg ttcacgttcg
     1621 cgatgccgca gtcggagccg ctcgggccgc agaaacgctc cgcttcgcgc aggtcgtcgg
     1681 tgatgatggc gctcgcgagc ccttgcggga cgccgttttg gagcgcgatg gcttcgtcga
     1741 gcgtcgcgta acgcgagaag tacaggatgg gcgcgaaggt ttcctcggcg acgatgggcg
     1801 cgctcggatc gatctcgacg agcgcggggc ggacgtaagc gccaccggcc ggtacgccgc
     1861 tcgtcacgat ttggccgccg tggacgcgac cgccttgctc gcgcgccgtg gcgagcgcgc
     1921 gttgcatggc atcgagggcg ccgtgatcga tgagcgggcc catgagcgtg ccagaagcgc
     1981 gcggatcgcc cacgggtacg cgctcgtagg cgcggagcag ccgcgcgagc agctcgtcgg
     2041 caatgcgttc gtgcgcgatg agccgccgca acgacgtgca gcgctggccc gccgtgccca
     2101 ccgcggcaaa caacgcgg
//
LOCUS       DATIML010000738         3366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3044594, whole genome shotgun sequence.
ACCESSION   DATIML010000738 DATIML010000000
VERSION     DATIML010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3366
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044594"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..1222)
                     /locus_tag="VLJ38_12705"
     CDS             complement(122..1222)
                     /locus_tag="VLJ38_12705"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HSU40427.1"
                     /translation="MPLGPKSSRRHRRQRKGQAKAIAPNPFLSLLGAIKLDMDDKLER
                     FFADELVRVKAHGAEIRALLRATAALSSRGGKRLRPTLLVAGFRVVSPSGDLEPALDA
                     GLALELLHTYLLVHDDWMDGDALRRGGPTVHAALREHFDDERLGEVTAILAGDFAAAL
                     ATEVIGRVRAPAARQPAVLAAFAEMQKSAIIGQVLDVAAKKHDPETMYALKTGSYTVR
                     GPLRLGALLAGAKDSTLKALDAYAAPVGIAFQLADDLLSAFGNPSITGKALGNDLRAG
                     KRTPLVLEGFKRARGADRKLLTATFGNARASEAQVKRALDVLERSGARKKTEDRIEEL
                     LAEGLGSLRKGISSQARELLEGAALALTARRV"
     gene            1319..2365
                     /gene="fni"
                     /locus_tag="VLJ38_12710"
     CDS             1319..2365
                     /gene="fni"
                     /locus_tag="VLJ38_12710"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004452 - isopentenyl-diphosphate
                     delta-isomerase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HSU40428.1"
                     /translation="MTDLSARKADHLDLATSGDVGFQKRTTLFECIELVHDALPELEL
                     GSIDTSTTLLGKRLAAPILIAAMTGGTERAERINHELAAIAEERGYAFGLGSQRAMLK
                     NPAALATYAVRSVAPEMLLLGNLGVVQAGKLKSDEVRELCAAVGADALCVHLNPAMEL
                     IQSDGDRDFRGCLATLERLARELPIPVVAKETGCGLSSSVAARLKQHGIRHVDVSGAG
                     GTSWVAVEMHRAAGTGRALGETFRDWGIPTAASVLFTARQGFETIFATGGIRDGLDIA
                     KAVALGASAAGIARSSLQALETGGRAAALAFFDRLEAELKTAMLLVGARDLAALRRAP
                     RLVRGELATWATLA"
     gene            complement(2380..2691)
                     /locus_tag="VLJ38_12715"
     CDS             complement(2380..2691)
                     /locus_tag="VLJ38_12715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40429.1"
                     /translation="MSASAPTPEAVDELLEASELERARQLLAGATPSDERFAVVRVKL
                     GLFEGSLPAGAAQQALIKLMRRDPEWPGAKELYQLASSQAYRGRESSASHSHPPPPER
                     K"
     gene            2766..>3366
                     /locus_tag="VLJ38_12720"
     CDS             2766..>3366
                     /locus_tag="VLJ38_12720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40430.1"
                     /translation="MRKRCSPGSYLKDPSDDSSMADEKKPSAESNSPSQDLRSERDRF
                     VKTFTRGSRLTDEFIQDYERMLDRVAMLEAENANLRAQVAADRSMRDLVQKIERLEAE
                     KSELLSRTNRAEAITNQFTTRVQEVESEFSNLANLYVASNQLHSSLSPRGVTRRIKEV
                     LAQLLGAERYSMYLANEDGTELVPIASEGIGGNDLSPVPV"
BASE COUNT          538 a         1172 c         1128 g          528 t
ORIGIN      
        1 gccacggcgc cgcgatcgag cgccgcagcg agcgccggtg ccccatacac gaccgcgtgc
       61 tcaccgagca gaatcacttt gccagcggca cgtgccgtac gctccatggc tcgcgtcggc
      121 tttacacgcg gcgcgccgtg agcgccagcg ccgcgccttc gagcagctct cgtgcttggc
      181 tcgagatgcc cttccggagc gagccgagtc cctcggccag gagctcttcg atgcggtctt
      241 ccgtcttctt gcgcgcgccg ctccgctcga gcacgtcgag cgctcgcttc acctgcgctt
      301 cgctcgcgcg cgcgttgccg aacgtcgccg tgagcagctt gcgatcggcg ccacgggcgc
      361 gcttgaagcc ttcgagcacg agcggcgtgc gcttgcctgc gcgcagatcg ttgccgagcg
      421 ccttgcccgt aatgctcgga ttaccgaacg cgctcaagag gtcgtcggcg agttgaaacg
      481 cgataccgac gggcgctgcg tacgcgtcca gggccttgag cgtgctgtcc ttcgcgccgg
      541 cgagcagggc gccgagacgc agcgggccgc gcaccgtgta gctgcccgtc ttgagcgcgt
      601 acatcgtctc cggatcgtgc tttttggcgg caacgtcgag cacttgcccg atgatcgcgg
      661 atttttgcat ctccgcgaac gccgccagca cggcgggctg acgcgcagcg ggcgcgcgca
      721 ctcgtccgat gacttccgtc gcgagcgcag cggcgaagtc acccgcgagg atggccgtga
      781 cttcgccgag tcgttcgtcg tcgaagtgct cacgcagcgc cgcgtggacg gtcggcccgc
      841 cgcggcgaag ggcgtcgccg tccatccagt cgtcgtggac gagcaggtaa gtgtggagca
      901 gctcgagcgc gagccccgcg tcgagcgccg gctcgagatc acctgagggc gacacgacgc
      961 gaaagcctgc gacgagcagc gtcgggcgca accgcttgcc gccccgcgag ctcagcgcgg
     1021 ccgtggcgcg caagagcgcg cgaatttcgg cgccatgcgc tttcacgcgc acgagctcgt
     1081 cggcgaagaa gcgctcgagc ttgtcgtcca tatcgagctt gatcgcgccg aggagcgaca
     1141 ggaacggatt cggcgcgatg gccttggctt gacctttgcg ctggcggcgg tgccgccggg
     1201 aactcttcgg acctaaaggc attttgtggg gccggagcct agcacgctcc cgcgggcggg
     1261 cgcccacttc gtcaggcgac gctcgaccgc gcggcgcact cgccgtatcg aagcgcccat
     1321 gacggatctg tcggcgcgca aagcggacca cctcgatctt gccacgtccg gcgacgtggg
     1381 ctttcagaag cgcacgacgc tcttcgaatg catcgagctc gtccacgatg cgctgcccga
     1441 gctcgagctc ggctccatcg atacgagcac cactttgctc ggcaagcggc tcgcagcacc
     1501 catcctcatc gccgccatga cgggcggcac cgagcgcgcc gagcgcatca accacgagct
     1561 tgccgcgatc gccgaagaac gcggctacgc cttcggtctc ggcagccaac gcgccatgct
     1621 caaaaatccg gctgcgctcg cgacctacgc cgtgcgcagc gtcgctcccg aaatgctcct
     1681 gctcggcaat ctcggcgtcg tgcaggccgg caagctcaag agcgacgagg tgcgcgagct
     1741 ctgcgccgcc gtcggcgccg acgcgctctg cgtgcacctg aaccccgcaa tggagctgat
     1801 ccagagcgac ggcgaccgcg attttcgtgg ctgcttggcg acgctcgagc gtctcgcccg
     1861 cgagctaccg atccccgtcg tcgcgaaaga gaccggctgc ggattatcga gcagcgtggc
     1921 ggcgcgcctg aagcagcacg ggatccgcca cgtcgacgtg tccggcgcgg gcggcacgtc
     1981 ttgggtcgcc gtcgagatgc accgcgcggc gggcaccggg cgtgcgctcg gcgaaacgtt
     2041 ccgcgactgg ggcatcccca cggcagcgag cgtcctcttc acggcgcgcc aaggcttcga
     2101 aacgatcttc gccacgggcg gcattcgcga cgggctcgac atcgccaaag cggtcgccct
     2161 cggcgcctcg gcggcgggca tcgcgcgttc ctcgctgcaa gcgctcgaga ccggcggacg
     2221 cgcagcggcg ctcgcgttct tcgatcgact cgaggccgag ctcaagaccg cgatgctctt
     2281 ggtcggcgct cgcgacctcg cggcactgcg ccgcgcacca cgcctcgtcc gcggcgagct
     2341 cgcgacgtgg gcgacgctcg cctgaaggcg caggcttccc tacttgcgct ccggtggcgg
     2401 tggatgtgag tgcgaggctg acgattcgcg cccgcggtag gcctgactcg aggcgagctg
     2461 gtaaagctcc ttcgcgccgg gccactcggg atcgcggcgc atcagcttga tcagcgcctg
     2521 ctgcgcggcg ccggcgggca acgacccctc gaacagaccg agttttacgc gcacgacggc
     2581 gaatcgctcg tcgctcggcg tcgcacccgc gaggagctgt cgggcccgct cgagctcgga
     2641 tgcctcgagc aactcgtcga cggcttcggg ggtcggggcg ctcgcgctca tgatagtcgc
     2701 tctgatacta tactgagagc cggggcgaac cccaaccccc aaaaaggggt gcgccgcgca
     2761 aaggggtgcg aaaacggtgt tcaccgggct cgtacctgaa ggatcctagc gacgactcca
     2821 gcatggccga cgagaagaag cccagcgccg agagtaattc accgtcgcag gacctcaggt
     2881 ccgagcgcga tcgcttcgtg aagacgttca cgcgcggctc gcgcctgacc gacgagttca
     2941 ttcaagacta cgagcgcatg ctcgatcgcg tcgcgatgct cgaggccgag aacgcgaacc
     3001 tgcgggctca agtcgccgcc gatcgctcga tgcgcgatct ggttcagaag atcgagcgcc
     3061 tcgaggcgga gaagagcgag ctcttgtctc gcaccaaccg ggcggaagcg atcacgaatc
     3121 agttcacgac gcgcgtgcag gaggtcgaga gcgagttttc gaatctcgcc aacctgtacg
     3181 tcgcgagtaa ccagctgcac tcgagcctct cgccgcgcgg cgtgactcgc cgcatcaagg
     3241 aagtgctcgc acagctcctc ggcgcggagc gctactcgat gtacctcgcg aacgaagacg
     3301 gcaccgagct cgtccccatc gcctccgagg ggatcggcgg aaacgatctt tcgccggtgc
     3361 ccgtcg
//
LOCUS       DATIML010000739         3973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3045040, whole genome shotgun sequence.
ACCESSION   DATIML010000739 DATIML010000000
VERSION     DATIML010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3973
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3045040"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VLJ38_12725"
     CDS             <1..243
                     /locus_tag="VLJ38_12725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40431.1"
                     /translation="NARAMGEFGAVYVVSGHIAGQTDTMPLRIEKLFQEYNLPGSFAV
                     ASLLTLVAILTLFAKSKLEQHLPAAADSRELGRKVP"
     gene            240..1295
                     /locus_tag="VLJ38_12730"
     CDS             240..1295
                     /locus_tag="VLJ38_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HSU40432.1"
                     /translation="MSIAVKNVSKHFGAFAAVDDVTLDVPNGELVALLGPSGSGKTTL
                     LRIIAGLEVADSGSVLHHDEDVTGYSPRDRKVGFVFQHYALFRHMTIADNIGYGLKVR
                     GVGKAERRARVEELLKLIRLESFGPRYPSQLSGGQRQRVALARALAARPAVLLLDEPF
                     GALDAKVRTELRQWLRRLHEEIHVTSVFVTHDQEEAFEVADRVVVMNQGKIEQVGTPA
                     EVFERPANAFVLDFLGNVNVFDGELDGDKPVLRGSSAPPALSGAARQAEIYVRPHELR
                     IEHHRNGEASIEAKVVHVNPAGLRTKVELRAPELDKAIFAELTAERFSELGLKTGDTV
                     YVSARRVHVFTPANYSI"
     gene            complement(1323..2273)
                     /locus_tag="VLJ38_12735"
     CDS             complement(1323..2273)
                     /locus_tag="VLJ38_12735"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HSU40433.1"
                     /translation="MAHVLAFERPVVELVARVRELRALASTDERWAPELERLEDKAAR
                     LAREVFANLSPMQKVQLSRHPNRPYTLDYVSRLFQEFVELRGDRRFADDASIVAGIGR
                     FHGRSVAVVGHQKGRSAKENVARNFGMPHPEGYRKAIRMYDLAERFGLPVLTFVDTPG
                     AFPGIGAEERGQSEAIGAAIESMSKLGVPVVTTVIGEGGSGGALALGIGNRVLVLEFG
                     YYSVITPEGCAAILWKSSDRTPEAAARLKITAPNLLELGIVDTIVDEPPGGAHQDHDV
                     AAKLLDRALFKELTALGSLDPDALRDDRYDRFRRLGAFVA"
     gene            complement(2485..3336)
                     /locus_tag="VLJ38_12740"
     CDS             complement(2485..3336)
                     /locus_tag="VLJ38_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40434.1"
                     /translation="MQPSFVRRASNRVYRFQALVCALGPSLLVALGCAGQPDVASTPA
                     GATPLTPASAPAVNATANPSALGASLASSSDPPASPSANPAPANSAAPALSASSAAGT
                     PPPSLDEENVYAPGHAATTADVPLVDANGKPLPQTDARPSAKNATFEARMRLLARAVT
                     SGDADAALPAFFPAVAYAQVKDIPQPDKDWEHRLVAAFRRDIAEYHGKLGPDAAKAVL
                     VAVEVPENKATFMKPGSEGNRVGYYRVLRSTVTFKKPDGKEQSFELTSMISWRGEWYV
                     VHLHGFK"
     gene            complement(3508..>3973)
                     /locus_tag="VLJ38_12745"
     CDS             complement(3508..>3973)
                     /locus_tag="VLJ38_12745"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSU40435.1"
                     /translation="YEGTLDKFMGDGIMALWGAPVVHPDDALRSVSCALEQMDMLARF
                     NRRRIEENQEPLAIGIGIHTGPLVAGYIGSSKALSYTVIGDVANTSARVCGIAAPGQI
                     LVSEATLARLQNKVEVDELPPANLKGKEKPFRIFNVKRLVTSVQVPLVAGTN"
BASE COUNT          620 a         1301 c         1385 g          667 t
ORIGIN      
        1 aacgcgcgcg cgatgggcga gttcggtgcc gtctacgtgg tttcgggcca catcgcaggg
       61 cagacggaca ccatgccgct ccggatcgag aagctgtttc aagagtacaa tttgccgggg
      121 tcgttcgcgg tcgcgtcgct cttgacgctg gtcgcgatcc tgacgctgtt cgccaagagc
      181 aagctcgagc agcacctgcc cgcggccgcc gacagcaggg agctcggaag gaaagtgccg
      241 tgagcatcgc cgtcaagaac gtctccaaac actttggcgc ttttgccgcc gtcgacgacg
      301 tgactctcga cgtcccgaac ggcgagctcg tcgcgctgct cggtccgtcc ggctcgggca
      361 agacgacgct gctccgcatc atcgcgggcc tggaggtcgc cgacagcggc tccgtgctgc
      421 accacgacga agacgtgacc ggttattcgc cgcgcgatcg caaggtgggc ttcgtctttc
      481 agcactacgc gctctttcga cacatgacca tcgccgacaa catcggttat ggcctcaagg
      541 tgcggggcgt cggcaaagcc gagcgacgag cgcgcgtcga agagctgctc aagctgataa
      601 ggctcgagag tttcggcccg cgctatccgt cgcagctttc gggcgggcaa cggcagcggg
      661 tcgcgctcgc gcgggcgctc gccgcgcgcc cggccgtgct cttgctcgac gaaccgttcg
      721 gcgcgctcga cgccaaagtg cgtaccgagc tgcggcagtg gctgcggcgc ttgcacgaag
      781 agatccacgt gacgagcgtc ttcgtcaccc acgatcagga agaggcgttc gaggtggccg
      841 atcgggtggt cgtgatgaac cagggcaaga tcgagcaggt gggcacgccg gccgaggtgt
      901 tcgagcggcc ggcgaacgcc ttcgtgctcg acttcctcgg taacgtgaac gttttcgacg
      961 gcgagctcga cggcgacaag ccggtgctgc gcggctcgag cgcgcccccg gcgttgtccg
     1021 gcgcggcgcg ccaggccgag atttacgtgc ggccgcacga gctgcgcatc gagcaccacc
     1081 gtaacggcga ggccagcatc gaggccaagg tggtgcacgt caatccggcg ggcctccgca
     1141 cgaaagtcga gctccgtgcg cccgagctcg acaaggcgat tttcgccgag ctcacggccg
     1201 agcgcttctc ggagctcggc ttgaagacgg gcgacacggt gtacgtgtcg gcgcggcgcg
     1261 tgcacgtgtt cacgccggcg aactattcga tttgacgtcg tgcgccggcg cggcgccgtg
     1321 ggtcacgcga cgaacgcgcc gaggcgccgg aagcgatcgt aacggtcgtc gcgcagcgcg
     1381 tccggatcga gcgagccgag cgcggtgagc tccttgaaga gcgcgcggtc gaggagcttg
     1441 gctgcgacgt cgtgatcctg gtgcgcgccc cccggcggct cgtcgacgat ggtgtctact
     1501 atgccgagct cgagcaaatt cggcgccgtg attttgaggc gcgccgcggc ttcgggcgtg
     1561 cgatcggagc tcttccacaa aatggccgcg cacccttcgg gcgtgatgac cgagtagtaa
     1621 ccgaactcga gcacgagcac gcggttgccg atgccgagcg cgagcgctcc gcccgagccg
     1681 ccttcgccga tcacggtcgt caccacgggc accccgagct tcgacatgct ctcgatggcc
     1741 gccccgatcg cctcgctctg cccgcgctct tcggcgccga tgccggggaa ggccccgggt
     1801 gtgtcgacga acgtgagcac gggcaaaccg aagcgctcgg caaggtcgta catgcggatg
     1861 gccttgcggt agccctcggg gtgcggcatc ccgaagttac gcgcgacgtt ctctttggcg
     1921 gagcgaccct tctggtgccc gacgacggcg acgctacgcc cgtgaaagcg gccgatgccc
     1981 gcgacgatcg aagcgtcgtc ggcgaagcgc cggtcgccgc ggagctcgac gaactcctga
     2041 aagagccggc tcacgtaatc gagggtgtag ggccgattcg gatgccgcga gagctgcacc
     2101 ttttgcatcg gcgacagatt cgcgaacact tcgcgggcga ggcgggcggc cttgtcctcg
     2161 agccgttcga gctcgggcgc ccatctctcg tccgtgctcg cgagggcgcg gagctcacgc
     2221 acgcgagcaa ctagctcgac gacgggacgc tcgaacgcga ggacgtgggc catgggcggg
     2281 ggccgaatct ctctgaatct tcgcactatg tcgagcggtc gccgctgacg cgttgcgccg
     2341 tcgtcacacc gcgaagatca gttcgcggcc cgagcacgac ttcgccagtg ctttgtccgc
     2401 cctcgcgcga agtgccttga ccagttggcg agtcgagcgc ggccttcgac gcgctgcgac
     2461 gagacctcga gcggaactct gcgctcactt gaagccgtgc aaatgcacga cgtaccactc
     2521 gccgcgccag gagatcatac tcgtgagctc gaagctctgc tccttgccgt ccggcttttt
     2581 gaacgtaacg gtggagcgca gcacgcgata atagccgaca cgattgccct cgctgcccgg
     2641 cttcatgaac gtggctttgt tctccggcac ctcgacggcg acgagcacgg ctttggcggc
     2701 gtcggggccg agcttgccgt ggtactcggc gatgtcgcgc cgaaacgcag cgacgagccg
     2761 gtgctcccaa tccttgtcgg gctgcgggat gtctttcacc tgcgcgtagg cgacggcagg
     2821 gaaaaaagcg ggcagcgctg cgtccgcgtc gccgctcgtg acggcgcgcg cgagcaggcg
     2881 catgcgcgct tcgaaagtcg cgttcttcgc cgaggggcgc gcgtccgtct gcggtagcgg
     2941 cttgccgttc gcgtcgacga ggggcacatc ggccgtggtc gctgcgtgac cgggcgcgta
     3001 aacgttctct tcgtcgaggg agggtggagg cgtgccggcg gcgctcgagg ccgagagcgc
     3061 gggtgcggct gaattcgcgg gtgctgggtt cgcggacggc gaggcgggtg gatcgctcga
     3121 gctcgcgagc gacgcgccga gcgccgaagg attcgccgta gcgtttactg ccggcgcgct
     3181 cgccggcgtg agcggcgtcg cgccggcggg cgtgctcgca acgtccggct gtcccgcgca
     3241 gccgagcgcg acgagcaagc tcgggccgag cgcgcagacg agcgcttgaa agcgataaac
     3301 acgattcgat gccctacgaa cgaaggacgg ttgcacgacg aatcgcccat tctgcccggg
     3361 ttcgccgctg attgggaagt agcaaaccac ccgctcggtc ctgccgcgag ccgcccacgt
     3421 tcggtccgcc ggcctgacga ccgaggtgcc gcgtcgggct ctcgagcgcg gcgtcctttc
     3481 gttcgcgcgc cccgtcagcc gatcgcttca gttcgtgccg gcgacgagcg gcacctgcac
     3541 gctcgtgacg agtcgcttca cgttgaagat gcggaacggc ttttctttgc ccttcaaatt
     3601 ggcgggcgga agctcgtcga cttcgacctt gttctgcagc cgcgcgagtg tcgcttcgct
     3661 cacgaggatc tgcccgggcg ccgcgatgcc gcagacgcga gcgctcgtgt tggcgacgtc
     3721 gccaatcacc gtgtaagaga gcgccttcga gctcccgatg tagccggcga cgagcggtcc
     3781 cgtgtggatg ccgatgccga tcgcgagcgg ttcctgattc tcctcgatgc ggcggcggtt
     3841 gaagcgcgcg agcatgtcca tctgctcgag cgcgcacgac acgctgcgca gggcgtcgtc
     3901 ggggtgcacg acgggcgcgc cccagagcgc catgattccg tcgcccatga acttgtcgag
     3961 cgtgccctcg tac
//
LOCUS       DATIML010000740         4623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2753195, whole genome shotgun sequence.
ACCESSION   DATIML010000740 DATIML010000000
VERSION     DATIML010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4623
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2753195"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /gene="eno"
                     /locus_tag="VLJ38_12750"
     CDS             <1..423
                     /gene="eno"
                     /locus_tag="VLJ38_12750"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240306.1"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HSU40436.1"
                     /translation="GFAEDDWDGWKLITDKLGSSVQLVGDDLFVTNKTRLARGIEGKY
                     ANSILIKLNQIGTLTETLDTIRLATTAGYTSIISHRSGETEDAFIADLAVATNAGQIK
                     TGSLSRSDRIAKYNQLLRIAEELGDAQVYSGSTPFSRR"
     gene            complement(525..1457)
                     /locus_tag="VLJ38_12755"
     CDS             complement(525..1457)
                     /locus_tag="VLJ38_12755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40437.1"
                     /translation="MTLFKWSSLVPFVVGLGGCTQQQPALYASAADQPAFAERYPAAL
                     GTTLNVYLTDEQQAQTLANGFAKYPDQLDKPSWPAVEQVVTAADQAGRSGDLANGMAE
                     AEAVRGFYATAKDPIHQKVAGSVDYAAKQKQCDAAELPGTAVGAMDRAIDQQVDESVR
                     SHNAATRVIEDNQDALGKQNLDKLQKAADQIALASYIVHVRMPQTKRNLDAALGDASS
                     VKGTLERDQEHAKAVLDDPHASKAAKVTADKRSAAASNALGALEPEIQDAKKQSDEME
                     KRTQAAQNAYQQAFDALVKDIRARADAQASAAKK"
     gene            1672..2817
                     /locus_tag="VLJ38_12760"
     CDS             1672..2817
                     /locus_tag="VLJ38_12760"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HSU40438.1"
                     /translation="MAKSKVAVLKVKPTTILSDIERLCDLAGMSAALDKGATTILKDN
                     ISWHYPFPGANSTPWQIEGTVQALRSSGFQDITCVQNKTVVTNAFKGEDLNHYLPIFK
                     RYNIPVLYNFKPEDMKWIEYRPKARLHVLHKIFPEGLFIPDYFFGKNIIHLPTVKCHI
                     YTTTTGAMKNAFGGLLNTKRHYTHSWIHRTLVDLLAIQKEIHTGLFAVMDGTTAGNGP
                     GPRTMFPVIKDYMLASQDQVAIDAVAAKMMGFDPLSLEFINIAHEDGLGVGDPRDIEI
                     VGADISNESWGFSVGDNAASKVGDFMWFGPLKGIQKLFFHTPLVNMFVFGSEFYHDYY
                     RWPRKDQQVFQDWQRTTHWGRLFEAYGKGESDRTTRSAPMAAAAPGE"
     gene            complement(2819..3733)
                     /locus_tag="VLJ38_12765"
     CDS             complement(2819..3733)
                     /locus_tag="VLJ38_12765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HSU40439.1"
                     /translation="MKRGARRSDASDRPRVVVVAKRTAYRRFIVDERDPRAKALLRRH
                     DPAVKNWLAAHREHMQTLETVLAVLERAGAQVMLVERSHAAFDASDAALVVPVGGDGT
                     LLAASHSVVKTPVLGVNSSPQLSVGFFCSAQRGTFRRMLEQALEQKLASVELTRMAVA
                     VNGRVRNKHVLNEALFCHASPAATSRYLLEHGRSNEEQRSSGIWVGPAAGSTAAQRSA
                     GGRVLPLASRVLQLVVREPYTPSGRPTRMAKLLIEDGDHVRVESKMDDAALFLDGPYR
                     SVPVRLGDKVTFFASDEPLVVLGLKKRR"
     gene            complement(3730..4407)
                     /locus_tag="VLJ38_12770"
     CDS             complement(3730..4407)
                     /locus_tag="VLJ38_12770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSU40440.1"
                     /translation="MDFPHIELELLEDLTPPAPPGFLRLIRRRYRAHYPDGTVSAPFV
                     YDLIERPALDAVVLVAHYLDESGVRRVFLRTSVRPPLGTRTPERSPHPERDPSNAMLW
                     ELPAGLVETSEQSPDGLVRAAQRELGEELGFSVPTSAFHELGASVFPVPAMIGERLYF
                     FEVSVDPAARGEPHLDGSALEQFGAVLALPLSDALELCRRGTLMDGKTELALRRLVER
                     HGFGRLA"
BASE COUNT          773 a         1536 c         1546 g          768 t
ORIGIN      
        1 ggcttcgcgg aggacgattg ggacggctgg aagctcatca cggacaagct cggctcgagc
       61 gtgcagctcg tgggtgacga cctgttcgtc acgaacaaga cgcgtctcgc ccgcggcatc
      121 gagggcaaat acgcgaacag catcctgatc aagctgaacc agatcggcac gctgacggag
      181 acgctcgaca cgatccgtct cgcgacgacc gccggctaca cgtcgatcat ctcgcaccgc
      241 tcgggcgaga ccgaagacgc cttcatcgcc gacctcgccg tggcgacgaa cgccggccaa
      301 atcaagacgg gcagcctgag ccgcagcgac cgcatcgcga agtacaatca actgctccgc
      361 atcgccgaag agctcggcga cgcgcaggtt tattcgggca gcacgccgtt ctcgcggcgc
      421 tagtcgccgc taggcactga gccgtcgcga ggcgcggcgg ctcggtggcc atggccgttc
      481 gtcgtggccc aaccggaccg cgacgtgcgt cacgtgcagc tgcgttactt cttcgccgcg
      541 ctcgcctgcg cgtccgcgcg cgcccgaatg tccttcacga gcgcatcgaa cgcctgttga
      601 taggcgttct gggcggcctg ggtccgcttc tccatctcgt cggactgctt tttggcgtct
      661 tggatttcgg gctcgagcgc gccgagtgcg ttcgaggctg ccgcgctgcg cttgtcggcc
      721 gtaaccttcg cggctttgga ggcgtgcgga tcatcgagca cggctttggc gtgctcttgg
      781 tcgcgctcga gcgtcccctt cacgctcgaa gcgtcgccga gtgcggcgtc gaggttccgc
      841 ttcgtctgcg gcatgcgcac gtgcacgatg tagctcgcga gcgcgatctg gtcggccgct
      901 ttttgcagct tgtcgaggtt ctgcttaccg agcgcgtcct ggttgtcctc gatcacgcgc
      961 gtcgcggcat tgtgcgagcg cacgctctcg tccacttgtt ggtcgatggc gcggtccatc
     1021 gcgccgacgg ccgtgcccgg cagctcggcg gcgtcgcact gcttttgctt ggccgcgtag
     1081 tcgacggagc ctgcgacctt ctggtgaatc gggtccttgg cggtcgcgta aaagccgcgc
     1141 accgcttccg cttcggccat gccgttcgcg agatctccac tccgccccgc ctgatcggcg
     1201 gccgtcacga cttgttcgac ggcgggccac gagggcttgt cgagctggtc ggggtacttg
     1261 gcaaagccgt tcgcgagcgt ctgcgcctgc tgttcgtcgg tcaggtagac gttcagggtc
     1321 gtgccgagcg ccgcggggta ccgttcggca aacgcgggct gatcggcggc tgaagcgtag
     1381 agggcgggct gctgctgcgt gcagcctccg agaccgacca cgaacggcac gagcgagctc
     1441 cacttgaaca aggtcatggg ccgagactct cctcggccgg tcacgacgcc gtcaagcagg
     1501 ctcgggcagc acgttccggt attgcggtag aggttcgacg cgcacggctg ccgaggacgt
     1561 ttttttgcgt ggccgcggcc ttccgagctc cgtgcagcct ttgtggagag ctcgtggaat
     1621 ttgggccggg ctgcttgctc gggcggcggc ctattactag ctttcccgcc catggcgaag
     1681 tcgaaagtcg cagtcctcaa ggtcaaaccc accaccatcc tctcggacat cgagcggctc
     1741 tgtgatctcg ccgggatgag cgccgccctc gacaagggag cgaccaccat cctcaaggac
     1801 aatatctcct ggcactaccc cttcccgggc gcgaactcca cgccctggca aatcgaaggc
     1861 acggtccagg cgctccgctc gagcggcttt caggacatca cctgcgttca gaacaagacc
     1921 gtcgtcacca acgccttcaa gggcgaggac ctgaaccact acctgccgat cttcaagcgc
     1981 tacaacatcc ccgtcctcta caacttcaag ccagaggaca tgaagtggat cgagtaccgc
     2041 ccgaaggcgc gtctccacgt cctgcacaag atcttccccg agggcctctt catccccgac
     2101 tatttcttcg ggaaaaacat cattcacctg ccgacggtca agtgtcacat ctacacgacg
     2161 accacgggcg cgatgaagaa cgcgttcggc gggctcctca acaccaagcg ccactacacg
     2221 cacagctgga ttcaccggac gctcgtcgat ctgctcgcga tccagaaaga gatccacacc
     2281 ggtctcttcg ccgtgatgga cggcaccacg gcgggtaacg gccccggtcc gcgcacgatg
     2341 ttccccgtga tcaaggacta catgctcgcg agccaagatc aggtcgcgat cgacgctgtg
     2401 gcggccaaga tgatgggctt cgatccgctg agcctcgagt tcatcaacat cgcgcacgag
     2461 gacggtctcg gcgtcggcga tccgcgcgac atcgagatcg tgggcgcgga catctcgaac
     2521 gagagctggg gcttcagcgt cggcgacaac gccgcgagca aggtcggcga tttcatgtgg
     2581 ttcgggccgc tgaaggggat tcagaagctc tttttccaca ccccgctcgt gaacatgttc
     2641 gtgttcggga gcgaatttta tcacgactac taccgctggc cgcgcaagga ccagcaggtg
     2701 ttccaggact ggcagcgcac gacgcattgg ggtcgcctgt tcgaggcata cggcaagggc
     2761 gagagcgatc gcacgacgcg ttcggcgccc atggccgcgg ctgcgccggg cgagtaactc
     2821 aacggcgctt cttcaagccc agcacgacga gcggctcgtc cgacgcgaag aacgttactt
     2881 tgtcgccgag ccgcaccggg acgctgcgat acggcccgtc caaaaagagc gcggcgtcgt
     2941 ccatcttgct ctccacgcgc acgtggtcgc cgtcctcgat gagcaacttc gccatgcgcg
     3001 tcggacgtcc cgacggcgtg tacggctcac gcaccacgag ctgcagcacg cgcgacgcca
     3061 gcggcaaaac acgtccgccc gccgaacgtt gcgccgccgt cgagcccgcg gcgggaccga
     3121 cccaaatgcc gctcgaacgc tgctcttcgt tcgagcggcc gtgctcgagc aagtagcgcg
     3181 acgtcgcggc gggcgacgcg tgacagaaga gggcctcgtt cagcacgtgc ttgttgcgca
     3241 cgcggccgtt gacggcgacg gccatgcgcg tgagctcgac gctcgcgagc ttctgctcga
     3301 gcgcttgctc gagcatgcgg cggaaggtgc cgcgctgcgc ggagcaaaag aagccgacgc
     3361 taagctgcgg tgagctgttc acgccgagca cgggggtctt gacgacgctg tgcgacgccg
     3421 cgagcaaggt gccgtcgccg cccacgggca cgacgagcgc ggcgtccgac gcatcgaagg
     3481 ccgcgtgcga gcgctcgacg agcatgacct gagcgcccgc gcgctcgagc acggcgagca
     3541 ccgtctcgag cgtttgcatg tgctcgcggt gcgcggcgag ccaattcttg acggcgggat
     3601 cgtggcggcg gagcagcgct ttggcgcgcg ggtcgcgctc atcgacgatg aagcgccggt
     3661 acgcggtgcg cttggcgacg acgacgacac gcgggcgatc ggaagcgtcc gagcggcggg
     3721 cgccgcgctt cacgcgagcc tcccgaaccc gtgccgctcg accagacggc ggagggcgag
     3781 ctcggtcttg ccgtccatca gcgtgccgcg ccggcagagc tcgagcgcgt ccgagagcgg
     3841 cagcgcgagg acggcgccga actgctcgag cgccgagccg tcgaggtgcg gctcgccgcg
     3901 cgcggccggg tcgaccgaaa cctcgaaaaa atagagccgc tcgccaatca tggccggcac
     3961 ggggaaaacg ctcgcgccaa gctcgtgaaa ggcgctcgtc ggcacgctga agccgagctc
     4021 ttcgccgagc tcgcgttggg cggcgcggac gaggccgtcc ggcgactgct cgctcgtctc
     4081 gacgaggccg gcggggagct cccagagcat cgcgttcgag gggtcgcgct cggggtgcgg
     4141 cgagcgctcg ggcgtgcggg tgccgagcgg cggtcgcacg gaagttctca aaaacacgcg
     4201 ccgcacgcca ctttcgtcca ggtagtgcgc gacgagcacg acggcgtcga gcgcgggacg
     4261 ctcgatgagg tcgtaaacga agggcgcgct caccgtgccg tccgggtaat gcgcgcgata
     4321 gcgccggcga atcaggcgca ggaaacctgg cggcgcgggt ggcgtcagat cttccaacag
     4381 ctcgagctcg atgtggggga agtccaaggc tgctcgcgcg ggagactact accgttttcg
     4441 tcgcgccgag gcttgccggc ggatgcggcc gagggtagag cggacgagac gccgatgact
     4501 cgccgcgcag ccgtgaccgt gtgcctcgcg ctctcgggat tgttcggtac gagcgccgcc
     4561 cacgcggaaa agacgaaggt ccccgcgccc gcgaatcgcg ccgaggttga ccgcctttcg
     4621 cac
//
LOCUS       DATIML010000741         1963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3045642, whole genome shotgun sequence.
ACCESSION   DATIML010000741 DATIML010000000
VERSION     DATIML010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3045642"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1323)
                     /locus_tag="VLJ38_12775"
     CDS             complement(<1..1323)
                     /locus_tag="VLJ38_12775"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU40441.1"
                     /translation="MKIAIGAPDVVGSTLSRRLALLTAARLVFLTLCLALVGLSYLRG
                     ASLGSTTLRIGLGLLVVSFALAGGYAGVLKTGRGLPLLADAQIVFDQLTWSVVAYLTG
                     GASSGAASLYGLSCLVGAALSGSRGAALAAGSGVVSYASLVLLLGSGVLAPPPDQPAS
                     IYHLSPEEIRFYLAVNALVMLVVALLAGTLAERLRWTGGELRIATERADRAERMAALG
                     RLATGLAHEIRNPLGSIAGSIDLLRSARGLSAEDQKLCDIIAREAGRLNDLVTDMLDL
                     SRPRRPELAPVDVAHLAHDVVELAARSGRAVSDVEVRYEGLRSVLIEADGAQLRQLVW
                     NLVRNGVQASRPGGLVRVVLELQGGRAVLSVIDRGVGIDEEARARLFDAFFTTRSHGT
                     GVGLAVVKSIADEHGFAIDVESGAGQGASFRVNLGPPLPSLGREYGKLT"
     gene            complement(1351..>1963)
                     /locus_tag="VLJ38_12780"
     CDS             complement(1351..>1963)
                     /locus_tag="VLJ38_12780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSU40442.1"
                     /translation="DSLPAITRLVIGTSRAFVSALPLIVLLGAGLVFGIVSVYRRPKG
                     KRFFHQAFLTMPVMGPVLRKIAVARFTRTLGTLLQSGVPILDALEICARTAGNVIVEE
                     GVMMVRQAISEGKNMAEPLAATKIFPDMVVQMIAVGEQTGALDQMLNKVADFYEEETD
                     IAVAAMTSAIEPILMVGVGGMVGVVLIAMYLPIFSLAGNIKSD"
BASE COUNT          367 a          675 c          660 g          261 t
ORIGIN      
        1 cgtcagtttt ccgtactctc tgccgaggga cggcagcggc gggcccaaat tcactcgaaa
       61 gctggcgccc tgtccggctc cgctttcgac atcgatcgcg aaaccgtgct cgtcggcgat
      121 gctcttgacc acggcgagcc ccacgcccgt gccatgcgag cgcgtcgtga agaacgcatc
      181 gaacagccgg gcgcgcgcct cctcgtcgat accgacgccg cgatcgatga cggagagcac
      241 ggcccggccg ccctgaagct cgagcaccac gcgcacgagc ccgccgggac ggctcgcctg
      301 cacgccgttg cgcacgaggt tccacacgag ctgccggagc tgggcgccgt cggcctcgat
      361 caagaccgag cggagccctt cgtaacgtac ttcgacgtcc gataccgcac ggcccgagcg
      421 cgctgcgagc tcgacgacgt cgtgggcgag gtgcgccaca tcgacgggag cgagctcggg
      481 acggcgcggc cgcgacaggt ccagcatatc cgtcacgaga tcattcaaac gccccgcttc
      541 gcgcgcgatg atgtcgcaga gcttctgatc ttcggcggag aggccacgcg ccgaacgcaa
      601 gaggtcgatc gagccggcga tcgagccgag cggatttcgg atctcgtgcg cgaggcccgt
      661 cgccaagcgt ccgagcgccg ccatgcgttc ggcgcgatcg gcgcgctcag tggcaatcct
      721 gagctcaccg cccgtccagc gcaggcgctc ggcgagcgtc ccggcgagca gcgcgaccac
      781 gagcatgacg agcgcattca ccgcgaggta gaagcggatc tcctcggggg agaggtgata
      841 gatcgacgcc ggctgatccg gcggcggcgc gagcacgccg ctgccgagca agagcacgag
      901 cgacgcgtag ctcacgacac cgctgcccgc agcgagcgcg gcgccccgtg agcccgagag
      961 cgcggctccc acgagacagc tcaagccgta aagcgacgcc gcgccgctcg acgcgccgcc
     1021 cgtgaggtag gccacgacgg accaggtgag ctgatcgaag acgatctgag cgtcggcgag
     1081 cagcgggagg ccacgacccg tcttgagcac accggcgtaa ccgcccgcga gcgcgaacga
     1141 gaccacgagc agcccgagcc cgatgcgcag ggtggtcgaa ccgagcgatg ccccgcgcag
     1201 gtaggaaagg cccacgagcg cgaggcagag cgtcaggaac acgagccgcg cggccgtgag
     1261 cagggcgagc cgtcgcgaga gcgtcgagcc cacgacgtcg ggagcgccga tggctatttt
     1321 caagggcaca ctcgagctgg acgctgtccg tcaatccgac ttgatgttgc cggccagcga
     1381 gaagatcggc aggtacatcg cgatgaggac gacaccgacc atgccgccga caccgaccat
     1441 caaaatcggc tcgatcgcgc tcgtcatcgc cgcgacggcg atgtcggtct cctcctcgta
     1501 gaaatcggcc accttgttca acatctgatc gagcgcgccg gtctgctcgc cgacggcgat
     1561 catctgcacc accatgtcgg gaaaaatctt ggtggccgcg agcggctcgg ccatgttttt
     1621 tccctcgctg atcgcctggc gcaccatcat cacgccctct tcgacgatga cgttgccggc
     1681 cgtgcgcgcg cagatctcga gcgcgtcgag gatgggcacc ccggattgga gcagcgtccc
     1741 gagcgtgcgc gtgaagcgcg cgacggcgat cttgcgcagc accgggccca tcacgggcat
     1801 ggtcaagaac gcttgatgaa aaaagcgttt gcccttgggc cggcggtaaa cggacacgat
     1861 gccgaacacg agccctgccc cgagcaggac aatgagcggc agcgcggaca cgaacgcgcg
     1921 cgacgtgccg atgaccaggc gcgtgatcgc cggcaggctg tcc
//
LOCUS       DATIML010000742         3827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3907115, whole genome shotgun sequence.
ACCESSION   DATIML010000742 DATIML010000000
VERSION     DATIML010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3827
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3907115"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1105)
                     /locus_tag="VLJ38_12785"
     CDS             complement(<1..1105)
                     /locus_tag="VLJ38_12785"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU40443.1"
                     /translation="MKRLLLVEPDESVRRELGAYLRSDGHEVLEIDKQRALELCQERV
                     DAVFVWTAREAARAAAVLREMDGSPQPRILFYAGTESASAHESTAPAPPALVGETTAM
                     RDLRATLRLLSGRPRTHVLVGGEAGSGKHTVARALHHATNPRHDFVHLTTARLANLLE
                     RGLRSFEEGATLYLPSIEAVDRSTQRGLAGLLAAHDGFNAPPVRLVIGLMRSGQQISL
                     GRLVQRAVHPELAARVPVLLDLLPLRKRRSDIPLLASHLLSSWCKDAGTSCPGLTPAA
                     LEQLADHAWPGNVRELANVLERASLSGHGRIDVADLPAFEAGRAGVDYELPSSGIDIS
                     EFERAMLVQALALSHGNQTQAASLLGLTRDQIRY"
     gene            complement(1277..2815)
                     /locus_tag="VLJ38_12790"
     CDS             complement(1277..2815)
                     /locus_tag="VLJ38_12790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40444.1"
                     /translation="MSELARALARVHEEPLAALLLAAEIECALEDRAHEAAPVARQLS
                     DALADAWLGVRQIATPFAQELMARLLLPDQVELKCPEGFAFYALDPAAYARAAARLRG
                     PRDACVVGVRTIGTSLSAVVRASLVRSGVAARRLTVRPSGHPWARVLEFGPAEREFVE
                     HHARDCDFLVVDEGPGRSGSTFLAVAEALERHGVPAARIRLLASHPIVAERLLAEDAP
                     RRFARFACEVVDAWSPPPGALDLSGGLWRRHVELRSWPPCWQTHERVKYLDAERKRLH
                     KFSGLSRYGSRVLERARLLAEAGFAPSVEPAEAGWLAYPWLSGRPARAGVDAANAVEV
                     LARYLAFRAAEITGPAPERGEIEAMARLNAREGAGVCVPEKFELEVVKPVVCDGHMMP
                     HEWIVADEAWMKTDGAEHGDDHFYPGRVDSAWDVAGAVVEWNLPSALEHALVQRYAAL
                     TRDDVRRRLDSYKLAYSALRLGVADFAERDAQAEDERDRWRAAKRHYAARLQHAASRL
                     TLRA"
     gene            complement(2880..>3827)
                     /locus_tag="VLJ38_12795"
     CDS             complement(2880..>3827)
                     /locus_tag="VLJ38_12795"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU40445.1"
                     /translation="VELYGTLEELQTKFEREVRDADVVMVGSYVPDGAEVLNWVLEKA
                     RGLKIFYDIDTPVTLARLEAGEKTYLTREAIPELDAYLSFSGGAALTRLEREYYARVA
                     LPLFCSVDPELYAPSERAPTRDLGYLGTYCADRQAALERLLLEPARRLPERRFIIAGA
                     CYPPEAWPANVERVEHVPPGDHSSFYGSLRYTLNVTRAHMIDVGHSPSVRLFEAAACG
                     VPIIGDAWPGIEDFFEPKREILLANEADEVEDYLERLREPERKSIARRARHRVLGEHT
                     ALHRAREFEGYLRRLGAAQSSPVSAKLPPAVGRAKMVGS"
BASE COUNT          635 a         1321 c         1286 g          585 t
ORIGIN      
        1 ggtacctgat ttgatcgcgc gtgagtccga gcagcgatgc cgcctgggtt tggttgccgt
       61 gcgaaagcgc gagcgcctgc accagcatgg cacgctcgaa ctcgctgatg tcgatgccgc
      121 tgctcggcag ctcgtaatcc acgccggcac gcccggcctc gaacgccggg aggtccgcca
      181 cgtcgatgcg cccgtggccg ctgagtgacg cgcgttccag cacgttggca agctcgcgaa
      241 cgttgccggg ccacgcatgg tccgcgagct gctcgagcgc cgcgggcgtg aggcccgggc
      301 acgaagtacc cgcatctttg caccaggacg agagcaagtg cgacgcgagc aacggaatgt
      361 cgctcctgcg tttgcgcagc ggcaagaggt cgagcagcac gggaacgcgc gcggcaagct
      421 ccggatggac cgcgcgttgc acgagccgcc cgagcgatat ctgctggccc gagcgcatca
      481 agccgatgac gagccgcacg ggaggcgcgt tgaaaccgtc gtgagcggcg agcagtcccg
      541 cgagtccgcg ttgcgtcgac ctgtcgaccg cctcgatcga cggcaggtac aaagtggccc
      601 cctcctcgaa cgagcgtagg ccgcgctcga gcagatttgc caagcgagca gtcgttaaat
      661 gcacgaagtc gtggcgtggg ttcgtggcgt ggtgcaacgc gcgggcgacc gtgtgtttgc
      721 cgctgccggc ttctccgccg acgaggacgt gcgtgcgcgg gcgccccgaa aggaggcgca
      781 aggtcgcgcg caggtcgcgc attgcggtcg tttctcccac gagcgccgga ggcgctggcg
      841 ctgtcgattc gtgagcggag gcgctctccg tacccgcgta gaacaagatg cgaggctgag
      901 gcgagccatc catttcccgc agcacggcgg ctgcgcgtgc cgcttcccgc gcagtccaaa
      961 cgaagacggc atcgacgcgc tcctgacaca gctcgagggc acgttgtttg tctatctcca
     1021 ggacttcgtg accgtcgctg cggaggtacg ccccgagctc acgcctgaca ctttcatcgg
     1081 gttcgacgag aagaagtcgt ttcatctgcc tcctcacaca atgtgagcac accagagcag
     1141 ctccgcgata tcagcaacaa acgtaccccc cgcccgctcg aatgtacata cgttatcgga
     1201 gcttcgccgc tacggctctc tacccttcga agcgccaatc agacacatgc gttctgcgac
     1261 ggcgtgatcg aacgcctcaa gctcgcagcg tcagtctcga cgccgcgtgc tgaagtcgcg
     1321 ccgcgtagtg tcgctttgcg gcacgccagc gatctcgctc gtcctctgct tgcgcgtcgc
     1381 gttcggcaaa gtccgcgacg ccgagccgta gcgccgaata agcgagcttg tacgagtcga
     1441 ggcgccgccg cacgtcgtcg cgggtgagcg ccgcataacg ctggacgagg gcgtgttcga
     1501 gcgcggacgg caggttccac tccacgacgg ctccagcaac gtcccaggcg ctgtcgacgc
     1561 gacccggata gaagtgatcg tcgccgtgct cggcgccgtc cgtcttcatc cacgcctcat
     1621 cggccacgat ccactcgtgc ggcatcatgt gcccgtcgca cacgaccggc ttcacgacct
     1681 cgagctcgaa cttttcgggc acgcacaccc ccgctccttc gcgggcgttg agcctcgcca
     1741 ttgcctcaat ttcgcctcgt tcaggcgccg gtccggtaat ctcggccgcc cgaaacgcca
     1801 ggtagcgcgc gaggacctcg actgcgttcg cagcgtccac gccggcccgc gccgggcgtc
     1861 cggaaagcca cgggtacgcg agccatcctg cctcggccgg ttcgacgctc ggggcgaagc
     1921 cggcttccgc gagcaggcgc gcgcgctcga gcacgcgcga cccatagcgc gacaatccag
     1981 aaaacttgtg gagccgcttc cgctcggcat cgaggtactt cacccgctcg tgggtctgcc
     2041 agcacggcgg ccacgacctc aattcgacgt gcctccgcca gaggcccccg gagagatcga
     2101 gcgcgcctgg cggcggtgac cacgcgtcga cgacctcgca agcaaagcgc gcgaagcgac
     2161 gtggcgcgtc ctcggcgagg agccgctcgg cgacgatcgg gtgactcgcc aggagccgaa
     2221 tcctcgcggc gggcacgccg tggcgttcga gcgcctcagc gacggcgagg aacgtcgaac
     2281 cgctccgtcc cggcccttcg tccaccacga ggaagtcaca gtctcgcgcg tgatgttcga
     2341 cgaattcgcg ttcggcgggg ccaaattcga ggacgcgcgc ccaggggtga ccgctcggac
     2401 gcacggtgag ccgacgtgcg gcaacgccgc tccgcacgag gctcgccctg acgacggccg
     2461 aaaggctcgt gccaatcgtg cgcacgccca cgacacacgc gtcgcgcggc ccgcgcagcc
     2521 gagccgcggc gcgtgcgtag gccgcgggat cgagcgcgta aaacgcgaag ccctcggggc
     2581 acttgagctc gacctggtcc ggtaacaaga gccgcgccat gagctcctgc gcgaacggcg
     2641 tggcgatctg ccgcacaccg agccatgcgt cggccaaggc gtcggagagc tggcgcgcca
     2701 cgggtgcggc ctcgtgcgct cgatcctcga gcgcgcactc gatttccgcg gcgaggagca
     2761 gcgccgcgag cggctcctcg tgcactcgcg cgagcgcgcg agcgagctcg ctcaaaagct
     2821 cgtgcgagcg aaccgaccgc cgggaatcgc ggaagacgag catcggcgtc gcgcgtcgct
     2881 cacgagccga ccatcttggc gcggccgacc gccggcggaa gcttggccga gaccgggctg
     2941 ctctgggcag cgccgagccg gcgcaggtac ccttcgaact cgcgagcgcg gtggagcgcc
     3001 gtgtgctcgc cgaggacgcg atggcgcgcg cgccgcgcga tgctcttgcg ctccggctcg
     3061 cgcagccgct cgaggtaatc ttcgacttcg tcggcctcgt tcgcgagcag gatctctcgc
     3121 ttcggctcga agaagtcttc gatgccgggc caagcgtcgc cgatgatggg gacgccgcac
     3181 gctgctgcct cgaacagacg cacgctcggc gagtgcccca cgtcgatcat gtgcgcgcgc
     3241 gtgacgttca gcgtgtagcg gagcgaaccg tagaagctcg agtgatcgcc cggcgggacg
     3301 tgctcgaccc gctcgacgtt cgcaggccac gcctcgggcg ggtagcaagc gcccgcaatg
     3361 atgaagcgac gttccggcaa gcgtcgagcc ggctcgagca agagccgttc gagcgcggcc
     3421 tggcgatccg cgcagtaggt gccgaggtag ccgagatcgc gggtaggagc ccgttcgctc
     3481 ggcgcgtaga gctccggatc caccgagcag aacaagggca acgccacccg ggcgtagtat
     3541 tcgcgctcga ggcgcgtgag cgcggcgccg ccgctgaacg agaggtacgc gtcgagctcg
     3601 gggatcgctt cacgcgtgag ataggtcttc tctcccgctt cgagccgcgc gagcgtgacc
     3661 ggcgtatcga tgtcgtagaa aatcttgaga ccacgcgcct tctcgagcac ccagttcagc
     3721 acctcggcgc cgtccggtac gtacgagccg accatgacta cgtcggcgtc gcgcacttcg
     3781 cgctcgaact tcgtctgaag ctcttcgagc gtgccgtaga gctcgac
//
LOCUS       DATIML010000743         3512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5068955, whole genome shotgun sequence.
ACCESSION   DATIML010000743 DATIML010000000
VERSION     DATIML010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3512
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5068955"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VLJ38_12800"
     CDS             <1..436
                     /locus_tag="VLJ38_12800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40446.1"
                     /translation="DCSATNPYCDLGMHRCIPCTPSDGCAAGSVCDGWSHSCLQSCAT
                     ELDPDHDCSRSTHMCNTRRSVCVECLGDDDCSSNPRGPHCAGGARCAECAVDTDCVTL
                     GRVCDPLTFTCVVCKDSRDCGAPLVCDPANHTCVGGEYDGEK"
     gene            661..1896
                     /locus_tag="VLJ38_12805"
     CDS             661..1896
                     /locus_tag="VLJ38_12805"
                     /inference="COORDINATES: protein motif:HMM:NF014113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40447.1"
                     /translation="MTLAKRAGRSFGAVFFGSFALMASAASCTSGEPTLAPGDGASAG
                     KTASGAGQSHGGATSGGAGLHGGGQVGSGGTVANSGGSSGGGSGATGGFAAVGGTGTA
                     GMNTAGLSSTGGSFGTGGSAGSRASSGTGGSAGSFTPGGGRGGGAGATSSGGGAGRGS
                     GGGGGMSGTSGSGGSGAGGNVAPPPDISGGSNGWASRYWDCCKPACGWTGNTGGRNPI
                     KSCSQSNQTLSDNNAKNACEGGGSAFMCWQDAPWTVGDKLAYGFAAASGGNYVCGRCY
                     HLQFNGSSHNGSGTSTQALNGKHMIVQVINNGGVAADQFDLLIPGGGVGALNACNTQW
                     GTADLGAQYGGFLAGCNGDVNCVKQKCQTVFSGKQDLLDGCNWFLGWFGAADNPNFTF
                     KQIACPSDITNKSGLSDPG"
     gene            complement(1880..3127)
                     /locus_tag="VLJ38_12810"
     CDS             complement(1880..3127)
                     /locus_tag="VLJ38_12810"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HSU40448.1"
                     /translation="MRRALTMFDALCLGVNAVVGSGVYLFPGTLAQRLGPASLVAWLL
                     TGVLCLPLALTFASLGTMEDRTGGSFRYAELAFGKGIAFVVGWSAWVTSVISWAAVAD
                     ALPSYLTPFAPSLGVEPYGRIVPPVLVLGLAALNVRGVKPSARLLDAFTALKLVPLVF
                     FVVVGLAAVRAAEFRPFAPHGLKALPAMALMTVFAYQGFEVVGVPSGEVREARRVVPR
                     AVLWSLFFPALLYLFVQLVFVGIGARASGAPLVDAARTLAGGTGATLLALGGVVSMLG
                     FNAGTALCTPRYLQALAEEGLLPRALANVHPRYATPAVAIVASGAVTAVIAELFDFEH
                     LVDMAALAVLAQYLASSAALVRLGKGRLRLLGVVSVLVSLSFGAQGELAPLAILGGLT
                     LAGVALAALTRFFARARRLSPDR"
BASE COUNT          692 a         1150 c         1202 g          468 t
ORIGIN      
        1 cgattgttcg gcgacgaatc cgtactgcga tctcggcatg catcggtgca tcccgtgcac
       61 ccccagcgac ggttgcgcgg caggcagcgt gtgtgacggc tggagccact cgtgcttgca
      121 gagttgcgcg acggagctcg atcccgatca cgactgcagc cgctcgacgc acatgtgcaa
      181 cacccggcgc agcgtctgcg tcgaatgcct cggcgacgac gactgcagct cgaacccgcg
      241 cggcccgcat tgcgcgggcg gcgcgcgctg cgccgagtgt gcggtcgaca ccgactgcgt
      301 caccctcggg cgcgtctgtg atccgctcac gttcacctgc gtcgtgtgca aggattctcg
      361 cgactgcggc gcgccgctcg tctgtgatcc ggccaatcac acttgcgtcg gcggtgagta
      421 cgacggcgaa aagtgatggg cctgcacgcg cgccgtgcgc tgcgaaaaac cctttgaact
      481 ccgcaaaaat cggcgcgcgt ctggttagtc acctctcgcg ggtgaagcaa ggcaggcacg
      541 tgctcgaacc tgcttccgag ctgcaattct ctgcgaccgg tgaatacccc cgaggtgtga
      601 tcggaagacg cgcccgatca agactggccg aggtggggac cagatgatac ccaagagaca
      661 atgactttgg cgaaacgtgc agggcgctcc ttcggcgccg tcttcttcgg atccttcgcg
      721 ctcatggcca gcgccgcctc gtgcacgagc ggcgaaccga cgctcgcgcc gggcgatggt
      781 gcgtcggcag gtaagacggc gagcggcgcg ggtcagagtc acggcggcgc gacgagtggt
      841 ggcgccggcc tgcacggggg cggccaagtc ggctcaggcg gcacggtcgc gaacagcggc
      901 ggctcgagcg gaggcggcag cggcgctacg ggcggttttg cggccgtggg cggaaccggt
      961 accgcaggca tgaatacggc gggcctgtcg agcaccggcg gaagcttcgg cacgggcggc
     1021 tcggctggta gccgagccag ctcggggacg ggcggcagcg cggggagctt cacgccgggc
     1081 ggcggtcgcg gcggcggcgc cggcgcgacg agctccggcg gcggcgcggg tcgaggctcc
     1141 ggcggcgggg gcggtatgag cggcacgagt ggcagcggcg gttccggcgc cggcggcaac
     1201 gtcgctccgc cgccggacat ctccggcggc tcgaacggtt gggcttcacg ctattgggat
     1261 tgttgcaagc cagcctgcgg ttggacgggc aacacgggtg gtcgcaaccc gatcaagtcg
     1321 tgcagccagt ccaatcaaac gctgagcgac aacaacgcca agaacgcgtg cgaaggcggc
     1381 ggcagcgcct tcatgtgctg gcaggacgcg ccctggaccg tcggggacaa gctcgcgtac
     1441 ggcttcgccg ccgcttcggg cggtaactac gtctgcggtc gctgttatca cctgcaattc
     1501 aacggcagct ctcacaacgg ctcgggcacg agcacgcagg cgctcaacgg caagcacatg
     1561 atcgtccagg tcatcaacaa cggcggtgtc gcggccgatc agttcgacct cctgatcccg
     1621 ggcggcggcg tcggcgccct caacgcgtgc aacacgcagt ggggcaccgc cgatctcggc
     1681 gcgcaatacg gtgggtttct cgccggctgt aacggcgacg tcaactgcgt gaagcaaaaa
     1741 tgccagaccg tgttcagcgg caagcaggat ctgctcgacg gctgcaattg gttcctcggt
     1801 tggttcggcg ccgccgacaa cccaaacttc acgttcaagc agatcgcgtg cccgtcggac
     1861 atcacgaaca agtccggcct cagcgatccg ggctgaggcg gcgcgcacgc gcaaagaagc
     1921 gcgtcagcgc tgcgagcgcg acgccggcga gggtgagccc gcctagaatc gcgagcggag
     1981 cgagttcgcc ttgagcgccg aacgagagac tcacgagcac cgagaccacc ccgagcagcc
     2041 gtagccgccc cttgccgagc cgcacgagcg ccgccgagct cgcgaggtac tgcgcgagca
     2101 cggccagcgc cgccatatcg accaagtgct cgaagtcgaa gagctcggca atgacggccg
     2161 tcacggcgcc gctcgcgacg atggccacgg ccggcgtggc atagcgcggg tgcacgttgg
     2221 cgagagcgcg cgggaggagc ccctcttcgg ccaaggcttg gagataacgg ggcgtgcaca
     2281 aagccgtgcc ggcgttgaaa ccaagcatcg agacgacgcc accgagcgcg agcagcgtcg
     2341 cgcccgtacc gcccgccagc gtgcgagccg cgtcgacgag cggagcgccc gaggcccggg
     2401 cacctatgcc aacgaagacg agctgaacga aaaggtacaa aagcgccggg aaaaatagcg
     2461 accagagcac ggcgcggggc acgacgcggc gcgcctcgcg cacttcgccg ctcggcacgc
     2521 ccaccacctc gaagccctgg tacgcaaaca cggtcatcag tgccatggcg ggcagcgcct
     2581 tcaaaccgtg cggcgcgaac ggtcgaaatt cggccgcgcg gacggccgct agcccgacca
     2641 ccacgaagaa gacgagcggc acgagcttga gcgcggtgaa tgcgtccagc aggcgtgcgc
     2701 tcggtttgac gcctcgcacg ttcaaggccg cgagtccgag cacgagcacg ggcggcacga
     2761 ttcggccgta gggctcaacg ccgagggacg gcgcgaacgg cgtcagataa ctcggtagcg
     2821 cgtccgcgac cgcagcccaa gagatcaccg acgtgaccca cgcggaccat ccgacgacga
     2881 acgcaattcc tttgccgaac gcgagctcgg cgtagcggaa cgagccgccc gttcggtcct
     2941 ccatggtgcc gagcgaggcg aacgtgagcg cgagcggcaa acacaaaacc cccgtgagta
     3001 accacgcaac gagcgacgcc ggaccgagcc tttgcgccag cgtccccgga aacaaataca
     3061 cgccactacc gacgaccgca ttcaccccga gacacagcgc atcgaacatc gtcagcgcgc
     3121 gccgcatgct atggtggtgc gtcgtttcag aagggagcat ccgaatggcc aaaggtcagc
     3181 agcgtccgaa gacgaacaac cagccgaagc tcaccgtcaa gcagaagaag cagaaaaaga
     3241 aggagaaggg cagcgcgaag tagtgcgctt ccctcacccg aagcaacgcg cagctagtac
     3301 tactgccgaa aatcttggaa gaacagatcg cgatcggcaa gtgagagcac gcgccacgcg
     3361 agtgctctgg cgcagccaac gccggctgct tttgagcatg gctcgagacg cagggcgcgt
     3421 ctgccgaact ccggaaaacg agacgcagcg attgctcaaa attccccgag caaacgcaaa
     3481 ttggcggcag tagtactagg ggtcagccta gg
//
LOCUS       DATIML010000744         1807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5069327, whole genome shotgun sequence.
ACCESSION   DATIML010000744 DATIML010000000
VERSION     DATIML010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5069327"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1807)
                     /locus_tag="VLJ38_12815"
     CDS             complement(<1..>1807)
                     /locus_tag="VLJ38_12815"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HSU40449.1"
                     /translation="ERLAALTGRRVQRIGLSATQKPIEDVARFLVGGTDDAAPDCTIV
                     DTGHVRARDLAIEVPESPLEAVMSTEVWGEVYDRITTLVREHKTTLVFVNTRRLCERL
                     AKNLGERLGQERVTSHHGSLSREHRLDAEQRLKSGALSALVATASLELGIDVGDVDLV
                     IQVGSTRSISAFVQRVGRSGHFLGGTPKGRLFPLSRDELCEAAALLDAVRRGELDRVR
                     IPEAPLDILAQQIVAATAAEGEWTEDALYELCRRAYPYRNLTRESFDAVVEMLAKGFA
                     TQRGRRGAHLHHDPVEHKLRPRRGAKLVAITSGGAIPDVADYEVLLEPEGLRVGTIHE
                     DFAVESMAGDIFQLGNQSYRIRRVEPGRVRVEDAKGAPPTLPFWLGEAPSRSAELSHA
                     VSRLREAVAERLDGEDGTANALAYLVNEIGLSEPAARQVTDYFALALATLGAMPSETT
                     LVLERFFDEQGGMHLVIHAPFGGRINRAWGLTLRKSFCRKFDFELQAAANEDAIVLSL
                     GPTHSFAVEDVWHYVRSASAHEVLVQALLVAPLFATRWRWNTQRALAVLRFRGGKKVP
                     PRFQRMDADDLLTVCFPDQVACAENLVGERQIPDHP"
BASE COUNT          265 a          580 c          677 g          285 t
ORIGIN      
        1 ggatgatcgg gaatttgccg ctcgcccacc aggttttcgg cgcacgcgac ctgatcgggg
       61 aagcagacgg tgagcagatc gtcggcgtcc atgcgctgaa agcgcggcgg cactttctta
      121 cccccgcgaa agcgcaagac ggcgagcgcc cgctgcgtgt tccagcgcca gcgcgtggcg
      181 aagaggggcg ccacgagcag cgcctggacg agcacctcgt gcgcggaggc gctgcgcacg
      241 taatgccaga cgtcttcgac ggcgaagctg tgcgtcgggc cgagcgagag cacgatggcg
      301 tcttcgttgg cggcggcttg cagctcgaag tcgaactttc ggcaaaacga tttgcgcagc
      361 gtgaggcccc aggcgcggtt gatgcgaccg ccgaacggcg cgtggatcac gaggtgcatc
      421 ccgccctgct cgtcgaagaa gcgctcgagc acgagcgtcg tctcgctcgg catcgcgccg
      481 agcgtcgcga gcgcgagcgc gaagtagtca gtgacctggc gcgcggcggg ctcggagagt
      541 ccgatttcgt tcacgaggta cgcgagcgcg tttgcggtgc cgtcctcgcc gtcgagacgt
      601 tccgcgacgg cttcgcgcag gcgcgacacg gcgtgcgaga gctcggcgct gcgcgagggt
      661 gcttccccga gccaaaacgg aagcgtgggc ggcgcgccct tggcgtcttc gacgcgcacg
      721 cggccgggct cgacgcgccg gatgcggtag ctctgattgc cgagctggaa gatgtcgccc
      781 gccatgcttt cgacggcgaa gtcctcgtga atcgtgccga cgcgcaggcc ctcgggttcg
      841 agcaagacct cgtagtcggc gacgtcgggg atggcgccgc ccgaagtgat ggcgacgagc
      901 ttggcgccgc ggcggggccg gagcttgtgc tcgacgggat cgtggtgcag gtgcgcgccg
      961 cgtcgcccgc gctgggtcgc gaagcccttc gcgagcatct cgacgacggc gtcgaagctt
     1021 tcgcgcgtga ggttacggta cgggtaggcg cggcggcaga gctcgtacag cgcgtcttcg
     1081 gtccactcgc cttcggcggc ggtcgcggcg acgatttgct gcgcgaggat gtcgagcggc
     1141 gcttcgggga tgcgcacgcg gtcgagctcg ccgcggcgca cggcgtcgag cagcgcggcc
     1201 gcttcgcaga gctcgtcgcg cgagagcgga aacagacgac ccttgggcgt tccgcccagg
     1261 aagtgacccg agcgtccgac gcgctgcacg aaggcggaga tcgagcgcgt cgagccgacc
     1321 tggatcacga ggtcgacgtc gcccacgtcg atgccgagct cgagcgacgc cgtggcgacg
     1381 agcgccgaga gcgcgccgga tttgagccgt tgttcggcgt cgagccggtg ttcgcgcgag
     1441 agggagccgt ggtgcgacgt gacgcgctcc tggccgagcc gctcgcctag gttttttgcg
     1501 agccgctcgc agagccggcg cgtgttgacg aacacgagcg tcgtcttgtg ttcgcgcacg
     1561 agcgtcgtga tgcggtcgta cacctcgccc caaacttccg tgctcatcac ggcttcgagc
     1621 ggcgactccg ggacctcgat cgcgagatcg cgcgcgcgca cgtgacccgt gtcgacgatg
     1681 gtgcagtcgg gcgcggcgtc gtccgtgccg ccgacgagga agcgcgccac gtcttcgatc
     1741 ggtttttgcg tcgccgacag gccgatgcgt tggacgcgcc gtcccgtgag cgcggcgagc
     1801 cgttcga
//
LOCUS       DATIML010000745         1919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3622861, whole genome shotgun sequence.
ACCESSION   DATIML010000745 DATIML010000000
VERSION     DATIML010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3622861"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(115..927)
                     /locus_tag="VLJ38_12820"
     CDS             complement(115..927)
                     /locus_tag="VLJ38_12820"
                     /inference="COORDINATES: protein motif:HMM:NF013664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40450.1"
                     /translation="MRLRGFVGIGLLCALAAACSVPVVAGLEDGDANRVVVALEQSGV
                     ASEKERDPDQESAYRVMVARDDASTALSILADEGLPPRAAPGLLEALGKGSLVPSRTA
                     EHARVVAGTGDELERSLIGLDGVVSARVHLGVPGRDPLAFDEKAPIATASVLLRHRGP
                     TPPISASEVQRLVAGAVPGLAPDEVSVVMLPVAPRPRTAERQLARLGPLTVTHASLFA
                     LRTMIGVAVLVSAALLACVVGLLFRLRRTEQALRDAASEAPDVPARPRRGTM"
     gene            complement(943..>1919)
                     /locus_tag="VLJ38_12825"
     CDS             complement(943..>1919)
                     /locus_tag="VLJ38_12825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40451.1"
                     /translation="LDHDSTFEVDLRMSMLPPEELPIELRASHVPAGRPGRQPAPSRP
                     MDATTELASLKARLESDPRPRYVVVKDGMDHGPFSAVELLQQIASHTFVDSDVLRDSL
                     SNDERTIKDWDEFAPFAEHARLHRDIRAEKAAIERVVVQESRSTRGKAILGLALVGAL
                     VAAGVVWILTKRGAKNDNVDVQDDTLSNIEVDGGINASGKRGGGAKRVVGHGPGGVPI
                     LGGGMSCESAQNAYVEEMNIGGPRGQADITGQQYGSILNRGSYFAHCGVPDSTGLSIC
                     AAVQNGRAVGVTVTAKPRNHTIESCVAASVRGLSFPSNPKLDVTRTNF"
BASE COUNT          292 a          658 c          670 g          299 t
ORIGIN      
        1 gcgcggcggc gcggcaatga ggcgctctgc tgctacggct ggtgctcgat cgctccgccc
       61 ggtactgccc tcgagcgttc gggccgctga acgcgcgtat tcgcgagcgc tcggctacat
      121 cgtcccacgc cgcgggcgcg cggggacatc cggggcttcc gacgcggcgt cgcgcaacgc
      181 ctgttccgtg cgccgcaaac gaaacaagag tccgacgacg cacgcgagca acgccgcgct
      241 caccaagacg gcgacgccga tcatcgtgcg caacgcaaag agcgaagcgt gggtgaccgt
      301 cagcggcccg agacgtgcca gctgccgttc ggcggtccgt gggcgggggg cgacgggcag
      361 catcaccacc gaaacctcgt cgggagcaag gcccgggacc gcccctgcca cgagccgctg
      421 tacctcgctc gcgctgatgg gcggcgtcgg tccgcggtgg cgtagcagca cggaagccgt
      481 cgcgatcggc gctttctcgt cgaaagctag gggatcgcgc cccggcacgc ccagatgcac
      541 acgcgccgag acgactccgt cgagaccaat cagcgagcgc tcgagctcgt ctccggtgcc
      601 ggcgacgacg cgcgcgtgct cggccgtccg gctcgggacg agcgaccctt tgccgagcgc
      661 ttcgagcaag ccgggagccg cgcgtggggg caagccttcg tcggcgagga tcgacagcgc
      721 cgtgctcgcg tcgtcgcgcg ccaccatgac gcggtaggcg ctttcctgat cgggatcgcg
      781 ctctttctcg gacgcgacgc cgctctgctc cagcgcgacg acgacgcgat tcgcgtcgcc
      841 gtcctcgagg cccgccacga cgggcacgct gcacgcggcc gcgagcgcgc agaggagccc
      901 aatgccgacg aaaccccgaa gcctcatacc cccgaatgaa cctcagaagt tcgtgcgtgt
      961 cacgtcgagc ttggggttcg aggggaagct cagtccgcgc accgaggcgg ccacgcacga
     1021 ttcgatcgtg tgattacgtg gtttggcggt cacggtcacg cccacggcgc ggccgttctg
     1081 gaccgcggcg cagatgctga ggcccgtcga atcgggcacg ccgcaatggg cgaagtagct
     1141 gccccgattg aggatactgc cgtactgctg gccggtgatg tcggcttggc cgcgcggtcc
     1201 gccaatgttc atctcctcga cgtaggcgtt ttgggccgac tcgcagctca tgccgccacc
     1261 gaggatcggc acgccgcccg ggccgtgacc gacgacgcgc ttggcgccgc cgccgcgctt
     1321 gcccgaggcg ttgataccgc cgtccacctc gatgttgctg agcgtgtcgt cctggacgtc
     1381 gacgttgtcg tttttggcgc cgcgcttcgt caggatccag acaacgcctg cagccacgag
     1441 cgcgccgacg agcgcgagac cgaggatggc tttgccgcgc gtgctgcggc tctcttggac
     1501 gaccacgcgc tcgatcgccg ccttttcggc cctgatgtcg cgatggagcc gcgcgtgctc
     1561 ggcaaaaggc gcaaattcgt cccagtcctt gatcgtgcgc tcgtcgttgc tgagcgagtc
     1621 gcgcagcacg tccgaatcca cgaacgtgtg gctcgcgatc tgctgcaaga gctcgacggc
     1681 gctaaatggc ccgtgatcca tgccgtcctt gacgacgacg tagcgggggc gcggatcgga
     1741 ctcgaggcgg gctttgagcg aagcgagctc ggtcgtcgcg tccatgggtc gcgacggcgc
     1801 aggctgacgg ccagggcgac ccgcgggcac gtgcgacgcg cggagctcga tcgggagctc
     1861 ttcgggtggc agcatcgaca tccgcaggtc gacctcgaag gtcgagtcgt gatccaggt
//
LOCUS       DATIML010000746         5674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1603249, whole genome shotgun sequence.
ACCESSION   DATIML010000746 DATIML010000000
VERSION     DATIML010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5674
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1603249"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..1390
                     /gene="ahcY"
                     /locus_tag="VLJ38_12830"
     CDS             2..1390
                     /gene="ahcY"
                     /locus_tag="VLJ38_12830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HSU40452.1"
                     /translation="MAQSAVVEGAGKVEPALSRKKQQGVPTQEGKNYRVRDMSLADWG
                     RKEISIAETEMPGLMALRAEYGAQKPLKGARVAGCLHMTIQTAVLIETLKELGAEVTW
                     TSCNIYSTQDHAAAAIAKAGVPVFAWKGETEEEYEDCLERQIFAFDGGKGPNMILDDG
                     GDLTIHIHKKHPQLFSGSDQIRGLSEETTTGVHRLYEMFKAGELKCPAMNVNDSVTKS
                     KFDNLYGCRESLTDGIKRATDVMFAGKICVVAGYGDVGKGCAQAMRGLGARVLITEID
                     PICALQAAMEGYEVTTMEDAAPRADILVTATGCCDVVRAEHLKVMKNEAILCNIGHFD
                     SEIDVAWLETQSGAREENIKPQVDHFIFPDGKKLILLARGRLVNLGCATGHPSFVMSS
                     SFTNQVLAQLALFNEKFPLGVHVLPKKLDEKVARLHLGKLGAKLDKLSQKQADYLGVG
                     VEGPYKPELYRY"
     gene            1421..1819
                     /locus_tag="VLJ38_12835"
     CDS             1421..1819
                     /locus_tag="VLJ38_12835"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HSU40453.1"
                     /translation="MTPGEKNIVRSLVAVAWADGRLESGESSVIEGLLTGFDASEAEE
                     RELLEYARTRRTLEADVPVAELSREERELLLANAALLTHADGDQSDAETEVLARLVTI
                     LGFSDAEAHAILSEADDGALALGARALEPD"
     gene            complement(1844..2443)
                     /locus_tag="VLJ38_12840"
     CDS             complement(1844..2443)
                     /locus_tag="VLJ38_12840"
                     /inference="COORDINATES: protein motif:HMM:NF016270.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HSU40454.1"
                     /translation="MHFKRLVRYFLRGLLVIAPLGLTVYIVWLVLSTVDRILPFPIPG
                     LGLIVTIVLITLVGVATSNVVGRTVVELADALFGRLPLVKLVYTSIKDLVDAFVGDKR
                     RFDVPVAVALAPESGARALGFVTRDGLARIGMPDYVAVYFPQSYNFAGYLLLVPRSRV
                     EPLDVPAAEVMTFIISGGVSGFGVGESMLPPEPRGAAAA"
     gene            2539..3045
                     /locus_tag="VLJ38_12845"
     CDS             2539..3045
                     /locus_tag="VLJ38_12845"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSU40455.1"
                     /translation="MRLSKAVLLLLLLCAACQKRVPEPESTETAKEAPAQSAATPPPP
                     EAAAAAPSASAASVTKLVKEDLKLGKGAAAKTGDSVKVHYTGTLLDGSKFDSSRDRNE
                     PFEFKLGAGMVIKGWDEGVVGMKPGGRRKLTIPSDMAYGKSGHPPVIPPDSPLVFDIE
                     LLEITPGT"
     gene            complement(3067..3957)
                     /locus_tag="VLJ38_12850"
     CDS             complement(3067..3957)
                     /locus_tag="VLJ38_12850"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU40456.1"
                     /translation="MGTKHAQERAAEPRSGESGLRVKRRLVPVLRQGVIEIRLDRPVL
                     VVGRSVTCEVQLTSGLVSRRHARLTLSGLGVSIEDLGSRNGVYVNSVRVIGSVRLKPG
                     DRVSVGDEVLYFGEIEEASEPAESVTGLVARVRQGDSPDDEVAIATRTADVFQLLASV
                     VDKALALGRGDEAERVIGSHLQATLAHVTAGNGISPELARTAAGYAVKLAGATGKAVW
                     MDNAVELYAALGLVLPLALVDEMYVLLRRVRGLDTAVLGAYTGALRARASELAPGERF
                     VLQRLLGLERLASWQTNTNG"
     gene            complement(4052..4888)
                     /gene="pheA"
                     /locus_tag="VLJ38_12855"
     CDS             complement(4052..4888)
                     /gene="pheA"
                     /locus_tag="VLJ38_12855"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: protein motif:HMM:NF008865.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HSU40457.1"
                     /translation="MSERLTGPVAFMGPRGTFSDLAVQAAFPNQPTFEVSTIPAVIDS
                     VERHAAEYGVVPIENSTEGGVSATLAALLESSLLIRGELVLSVPLCLAARHFDKARIR
                     RVASHPQPLGQCRHWLGRELPNAELVSMSSTTAAAREAARDDATAAVTSRLGAELFQL
                     ALIAENIEDHPDNATRFVIVGHADAPPSGYDKTSVVFSTAHERGALRRVLAVFDDEGI
                     NLTRIESRPAPGRRWEYVFFTDLEGHREDPPVQRALSRLALECGTVRVLGSYPRARET
                     IK"
     gene            complement(4885..>5674)
                     /locus_tag="VLJ38_12860"
     CDS             complement(4885..>5674)
                     /locus_tag="VLJ38_12860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40458.1"
                     /translation="ERPTAGRLGKSAPGLGKTPGVGRTTPLAKNPTRPSKRPPSLDPA
                     AARNFAATWPLFGDAAAPAFPAHPATTVHQLAPASADLAALAGRAPLSESSKQTERQQ
                     QKLTGELRDDAPEWVRAASSLAAWLEERIARGSVEPVEQAAIARAWAAFCLGGATEPQ
                     ILRVAHIVQRAHAAIRESPRGQQDLQAAFHAAAGVLHAALPGVIRQRMPLERVVYVVR
                     RLREEADAWTAIVQGTTELLGWTDYARVHAATAIRAVLERSRAR"
BASE COUNT          960 a         1886 c         1993 g          835 t
ORIGIN      
        1 catggcccag agtgcagtcg tcgaaggtgc gggaaaagtg gagccggcgc tcagccgcaa
       61 gaagcagcag ggcgttccga cgcaagaggg gaagaactac cgcgtccgcg acatgtcgct
      121 cgccgattgg gggcgtaagg aaatctcgat cgcggagacg gagatgcccg gcctgatggc
      181 cttgcgggcc gagtacggcg cgcagaagcc gctcaaagga gcgcgcgtcg ccggctgcct
      241 gcacatgacg atccagacgg ccgtcctgat cgagaccctg aaggagctcg gagcggaggt
      301 cacttggacg tcctgcaaca tctattcgac ccaggatcac gccgccgcag ccatcgccaa
      361 ggcgggcgtt ccggtcttcg cctggaaggg cgagaccgag gaggagtacg aggactgcct
      421 cgagcggcag atcttcgcgt tcgacggcgg caagggcccg aacatgatcc tcgatgacgg
      481 cggggacctc acgatccaca ttcacaagaa gcacccgcag ctcttctccg gctcggacca
      541 gatccgcggc ctgagcgagg agaccacgac cggcgtgcac cgactgtacg agatgttcaa
      601 ggcgggcgag ctcaagtgcc cggccatgaa cgtcaacgac tcggtcacca agagcaagtt
      661 cgacaacctc tacggctgtc gcgagtcgct gacggacggc atcaagcgcg cgacggacgt
      721 gatgttcgca ggcaaaatct gcgtcgtcgc gggctacggc gacgtcggca aggggtgcgc
      781 gcaagccatg cgcggcctcg gcgcacgcgt tctcatcacg gagatcgacc ccatctgtgc
      841 cctccaggca gcgatggaag gctacgaggt cacgacgatg gaggacgccg ccccgcgggc
      901 cgacatcctc gttaccgcca ccggttgctg cgacgtcgtc cgcgccgagc acctgaaggt
      961 gatgaagaac gaggccattc tctgcaacat cggccacttc gatagcgaga tcgacgtcgc
     1021 ctggctcgag acgcagtccg gtgcccgcga ggagaacatc aagccgcagg tcgatcactt
     1081 catcttcccc gacggcaaga agttgatctt gctcgcgcgc ggacgcctcg tgaacctcgg
     1141 ttgcgcgacg ggtcacccga gcttcgtcat gagctcgagc ttcacgaacc aggtgctcgc
     1201 gcagctcgcg ctcttcaacg agaagttccc gctcggagtg cacgtcctgc cgaaaaagct
     1261 cgacgaaaag gtcgcgcgcc tgcacttggg caagctcggc gcgaagctcg acaagctcag
     1321 ccagaagcag gccgactatc tcggcgtcgg ggtcgaaggc ccgtacaagc cggagctcta
     1381 tcgttactga gcgcgacgaa gaggcgaaga gggacgagcg atgacgcccg gtgagaagaa
     1441 catcgtgcgc tcgctcgtcg ccgtcgcctg ggcggacggg cggctcgagt ccggggaatc
     1501 gagcgtgatc gaagggctgc tcacgggctt cgacgcgagc gaagccgaag aacgcgagtt
     1561 gctcgagtac gcgcgcacgc gccggacgct cgaagcggac gtgccggtgg ccgagctgtc
     1621 gcgtgaggag cgcgagctct tgctcgccaa cgcggcgctc ctcacgcacg ccgacggcga
     1681 ccagagcgac gccgaaaccg aggtactggc gcgcctcgtc acgatcttgg gtttctccga
     1741 cgcggaagcg catgcgattt tgtccgaggc cgacgacgga gcgctcgcac tcggcgctcg
     1801 cgcactcgag cccgactgaa cgtcaggcgc gtgcgcattg gcgctaagcc gcggccgcgc
     1861 cgcgcggttc gggcggaagc atgctctcgc cgacgccgaa gccggacacg ccacccgaga
     1921 tgatgaaggt catgacctcg gcggcgggca catcgagcgg ttcgacgcgg ctcctcggca
     1981 cgagcaggag atagccggcg aaattgtacg actgcgggaa gtagaccgcg acgtagtcgg
     2041 gcattccgat gcgggcgagc ccgtcacgcg tgacgaagcc gagcgcccgc gcgccgctct
     2101 cgggggcgag cgccacggcg acgggcacgt cgaagcggcg cttgtcgccg acgaacgcgt
     2161 ctaccaagtc tttgatcgac gtgtacacga gcttcacgag cggcagccgg ccgaagagcg
     2221 cgtcagcgag ctccaccacg gttcggccga cgacgttcga cgtggcgaca ccgaccagcg
     2281 taatcaagac gatcgtcacg atgaggccaa ggcctgggat ggggaacggc aagatgcgat
     2341 cgaccgtgct gaggacgagc cagacgatgt agaccgtgag gccgaggggc gcgatcacga
     2401 gcaggccgcg caggaagtag cgcaccaggc gtttgaaatg catgacggaa gggtagcgct
     2461 ctcggctttg cccgacacaa gccccggcgc ccggcatttt tgctcgcccg cgcgccgctt
     2521 gcgcgagtag aaggcggcat gcgtctttcg aaagcagtcc tcctcctcct tctcctctgc
     2581 gcggcttgtc agaagcgcgt acccgagccg gaatcgacgg agacggccaa agaagcgccc
     2641 gcgcagtccg ccgcgacgcc gccgcctccc gaggccgccg ctgccgctcc gagcgcgagc
     2701 gcggcgagcg tcacgaagct cgtcaaggaa gatctcaagc tcggcaaggg cgccgccgcc
     2761 aagacgggcg acagcgtgaa ggtgcactac acgggaacgc tgctcgacgg ctccaagttc
     2821 gacagctccc gtgatcgcaa cgagcccttc gagttcaagc tcggcgcggg catggtgatc
     2881 aagggctggg acgagggcgt cgtgggcatg aagccgggcg ggcgtcgcaa gctcacgatc
     2941 ccttccgaca tggcttacgg caagagcggc cacccgcccg tgatcccgcc cgattcaccg
     3001 ctcgtcttcg acatcgagct gctcgagatc acgccgggga cgtgacgcac ggcgccgctc
     3061 ggcggctcaa ccgttcgtgt tcgtctgcca gctcgccagg cgctcgagtc cgagcagccg
     3121 ctgcagcacg aagcgttcgc ccggcgcaag ctcgctcgcg cgcgctctga gcgctcccgt
     3181 gtaagcgccg aggaccgccg tgtcgaggcc gcgcacgcgc cggagcagga cgtacatctc
     3241 gtcgacgagc gcgagcggga gcacgaggcc gagcgcggcg tagagctcga cggcgttgtc
     3301 catccaaacg gccttgcccg tggcaccggc gagcttgacg gcatagcccg ccgccgtgcg
     3361 cgcgagctcg ggtgagatgc cgttgcccgc cgtgacgtgg gcgagcgtcg cttggaggtg
     3421 ggagccgatg acgcgctcgg cttcgtcgcc gcggccgagc gcgagcgcct tgtcgacgac
     3481 gctcgcgagc agttggaaca cgtcggcggt ccgcgtcgcg atggcgacct cgtcgtcggg
     3541 ggagtcgccc tgccgcacgc gcgcgaccag ccccgttacg ctctccgccg gctcgctcgc
     3601 ctcctcgatt tcgccgaagt agagcacctc gtcaccgacg gagacgcggt cgcccggctt
     3661 gagccgcacc gagccgatga cacgcaccga gttcacgtac acgccgttgc ggcttccgag
     3721 gtcctcgatg ctgacgccga ggccgctcag cgtgaggcgc gcgtgacgcc gcgacacgag
     3781 gccgctcgtg agctgcactt cgcaggtgac gctgcggccg acgacgagca ccggccggtc
     3841 taggcgtatc tcgatgacgc cctggcgcag caccggcacc agccggcgtt tgacgcggag
     3901 cccgctctct cccgagcggg gctcggccgc tctctcttgc gcgtgcttgg tgcccacgtt
     3961 tgactacacg tctaaaccta cgaaggccca tacgtccagc gtgccggcgc ggacgcgcag
     4021 gtggggaaat gtaacctgct gaaactttag cctattttat ggtctctcgc gcgcgggggt
     4081 agctcccgag cacgcgcacc gtgccgcatt cgagcgcgag gcgcgaaagc gcgcgctgga
     4141 ccggcgggtc ctcccggtgt ccctcgaggt cggtgaagaa aacgtattcc cagcgccggc
     4201 ccggcgcggg gcgcgactcg atgcgcgtga gattgatgcc ctcgtcgtcg aacaccgcga
     4261 ggacacggcg taaggcgccg cgctcgtgcg cggtcgagaa caccacgctc gtcttgtcgt
     4321 agccgctcgg cggcgcgtcg gcgtgaccga cgatcacgaa gcgtgtcgcg ttgtcggggt
     4381 ggtcttcgat gttctcggcg atcagcgcga gttgaaagag ctcggcgccg agacggctcg
     4441 tcacggccgc tgtggcgtcg tcgcgcgccg cctcacgcgc cgccgccgtc gtcgacgaca
     4501 tcgagacgag ctcggcgttc ggcagctcgc gtccgagcca gtggcggcac tggccgaggg
     4561 gctgtgggtg cgacgcgacg cgtcgaatgc gcgctttgtc gaagtgccgc gcggcgaggc
     4621 agagcgggac cgagagcacg agctcgcctc ggatcaaaag cgagctttcg agcagcgcgg
     4681 cgagcgtcgc gctgaccccg ccttcggtcg agttctcgat ggggacgacg ccgtattcgg
     4741 cggcgtgccg ctcgacgctg tcgatcacgg cagggatcgt cgagacctcg aacgtcggct
     4801 ggttcgggaa agcggcttga acggcgaggt cggagaacgt cccgcgcggg cccatgaacg
     4861 cgacgggccc cgtgaggcgc tcgctcatcg ggcgcggctc cgctcgagca cggctcgaat
     4921 cgccgtcgct gcgtgcacgc gcgcgtagtc ggtccagccg agcagctcgg tcgtcccctg
     4981 aacgatcgcg gtccacgcat cggcctcttc gcgcagccgc cggacgacgt agaccacgcg
     5041 ctcgagcggc atgcgctggc gaatgacgcc cggcaacgcc gcgtgcagca cgccggctgc
     5101 ggcgtgaaat gccgcctgca agtcttgttg cccgcgcggg ctctcgcgaa tagcggcgtg
     5161 cgcgcgctga acgatgtgcg cgacgcgcag gatttgcggc tcggtcgcgc cgccgagaca
     5221 gaaggccgcc cacgcccgcg cgatcgctgc ttgctccacg ggttcgacgc tgccgcgcgc
     5281 gatgcgctcc tcgagccagg cagcgagaga gcttgccgcg cgcacccact cgggcgcgtc
     5341 gtcgcgcagc tcgccggtga gcttttgctg ctggcgctcc gtctgcttgc tgctttcgga
     5401 gagcggagcg cggccggcga gagcggctaa atccgcgctg gcgggcgcga gttgatgcac
     5461 ggtggtcgct gggtgcgccg ggaacgcggg cgcggcggcg tcgccgaaca gcggccaagt
     5521 agcggcaaaa ttgcgggccg cggcaggatc gaggctcggc ggtcgcttgc ttggtcgcgt
     5581 ggggttcttc gcgaggggtg tggtgcggcc gacgccgggc gttttaccaa gcccgggcgc
     5641 cgacttgccg agtcgtcctg cagtcggccg ctcg
//
LOCUS       DATIML010000747         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_737122, whole genome shotgun sequence.
ACCESSION   DATIML010000747 DATIML010000000
VERSION     DATIML010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737122"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VLJ38_12865"
     CDS             complement(<1..888)
                     /locus_tag="VLJ38_12865"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSU40459.1"
                     /translation="MEKAPVVPTGPSTEKVRAPRTSAQSQVETIHSHGQLLSGARIRI
                     AFTLFTAAVLVALTALVFALVSHIFARLTPSIRADLEWKAAHGAAELARSTDVGIVLA
                     DRAQIDKQFQAYAKDKDVLALAAADATGHVLHTYGTSPDGAASMFAGPAQRVREQAGW
                     YGAWEEVVIEGAVVGRVGVAISSARLDAGSRLERNILFGAGIAALFGLVAALAFVKLY
                     ITPILAVTAAAFERLEKTTAAALEAARIKSEFLANMSHEIRTPMNGVLGMTELVLATS
                     LTATQRDYLGIIRDSGQALL"
     gene            1040..1405
                     /locus_tag="VLJ38_12870"
     CDS             1040..1405
                     /locus_tag="VLJ38_12870"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40460.1"
                     /translation="MVVDDSEIAREAVKDTLETSGYEVVTLESAFGFIRTIREKSPAL
                     ILLDVGLASMNGTKLVQLARQHVGPGTRIVLYSGRSSDELASDARGSGADGYISKRTT
                     GRAFVLAVQGYIGGFNPSG"
BASE COUNT          267 a          511 c          534 g          294 t
ORIGIN      
        1 cagcagggcc tggcctgaat cgcgaatgat gcccaaataa tcgcgttggg tcgcggtgag
       61 cgacgtggcg agcaccagct ccgtcatccc gagcacgccg ttcatgggcg tgcggatctc
      121 gtggctcatg ttcgcgagaa attcgctctt gatgcgcgcc gcctcgaggg ccgctgccgt
      181 cgtcttttcg aggcgctcga aggccgcggc ggtcacggcg aggatgggcg tgatgtagag
      241 cttcacgaac gcgagcgccg cgaccaaccc gaacagcgcc gcgatcccgg cgccgaacaa
      301 gatattgcgt tccaggcggc tccctgcgtc gagccgcgcg ctggagattg cgacgccgac
      361 gcgcccgacc acggcgccct cgatcacgac ttcctcccac gcgccgtacc agccggcctg
      421 ctcgcggacg cgctgtgcgg ggcccgcgaa catactcgcc gcgccgtcgg gcgaggtgcc
      481 gtacgtgtga agcacgtgac cggtagcgtc ggccgcggcc agggcgagca cgtccttgtc
      541 tttggcgtag gcttgaaatt gtttgtcgat ttgcgctctg tccgcgagca cgattccgac
      601 gtcggtcgag cgggcgagtt cggccgcgcc gtgcgccgct ttccattcga ggtcggcgcg
      661 gatcgacggg gtcagccgcg cgaagatgtg cgacaccagc gcgaatacga gcgcggtcag
      721 cgccacgagc actgcagccg tgaatagcgt gaacgcgatg cggatccgcg cgcccgaaag
      781 gagctgtccg tgactatgga tcgtctcgac ctggctctgc gcagaggtgc gaggggcgcg
      841 caccttctcc gtgctcggac cagtggggac gacaggagcc ttttccacgt cttcgagcta
      901 cggccgactc tatctatgag ataaccggta agcgagaaat tttgttagaa cgattaattc
      961 gtaaccacga acggtcgttc ggggggtgga tcggactctg atggctggac ctgctcggaa
     1021 ctctacgaca ccagtagtcg tggtcgtcga tgacagcgag attgctcgcg aggcagtcaa
     1081 agacaccctc gagacctccg gctacgaggt ggtgacgctc gagagtgctt tcggcttcat
     1141 ccgcaccatt cgggaaaagt cgccggcgct catcttgctc gacgtggggc tcgcgtcgat
     1201 gaacggaacc aagctcgttc agctcgcgcg ccaacacgtc ggaccgggta cgcgtatcgt
     1261 gctctactcc ggccgttcgt ccgacgagct cgcgagtgat gcgcgcggct ccggggccga
     1321 cggctacatc agcaaacgca cgaccggccg cgcgttcgtg ctcgccgtcc agggctacat
     1381 cggcggcttc aatccgtcgg gctgacgctc gcgcgcgtcg gctcgttggt tcagcgcacc
     1441 gagagcgccg tcacgaagct ttcgagcact ggcgtcagcg ggtcgtccgt catccccatg
     1501 cgcacgatca tttcgttgtg ttcgaggccc gctagctcca cgaagcgcgc gttggggtcg
     1561 ccggccaagc gtgctttcat ttgcgcgaag gcttcgcggc agatgg
//
LOCUS       DATIML010000748         2813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3908355, whole genome shotgun sequence.
ACCESSION   DATIML010000748 DATIML010000000
VERSION     DATIML010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3908355"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VLJ38_12875"
     CDS             complement(<1..318)
                     /locus_tag="VLJ38_12875"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU40461.1"
                     /translation="MRVLVTGGAGFIGSHVVERLLAAGNEVAVLDNLSTGRRENVPAG
                     VRLYEIDVRDRDAVHRVLEEFRPQAVNHQAAQASVVVSLRDTRLDAEVNLLGGLNVLD
                     ASVA"
     gene            complement(614..2563)
                     /locus_tag="VLJ38_12880"
     CDS             complement(614..2563)
                     /locus_tag="VLJ38_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40462.1"
                     /translation="MSSDLPGLPPVPAEGPAAAPPAASVRAHARRFLADTGASIGAYF
                     TKYDPTLLRAFAPALVVSSLLYVRSPLSNYIFDEQEALLANPYVNGEGLGFLAAFKRD
                     FWGLPPDRSIGSYRPLPDLVWRLLWHVSHSPFLHHAVNVVVHALNGALIASFVLAVTR
                     RRAQAWFAGGVFLVLAVLTEAVSGVVGIADVLGGLFVLLALHALRLRWLAPLGVFAAL
                     FLGLLSKESVIVGVPLVAWAALVLAPALHPARPVRLLRAAAVLAASTLALVLYTWLRR
                     KCFPVPEPAIAAVSGEPRVVHVFHAFLRWFRQPPLPHDPINNPLIDADLPHRVAGALR
                     VYASGVVALFFPWHLSGDYSFPSEPIPARLVFPASVLGAILLVVPPLVAVGAWLRALL
                     RERRERRAGSFAAAPSVCFAHTALVAVGLLWVPLAYFPHSNIPILLPTVRAERFWYLP
                     AVGFALMLGPACAWFLRKQRRVAVIALSAWLGFEALQARLHAFDYTDDLVFWRATKNA
                     VPRSAKAHLNYSVMVGARGDLNERLSENRRALELAPRWAMAHIYLGDTLCRLHRPADA
                     WPHYVRGFELGPNDPNLIGLALQCLWDEKSIEAHQDELLAASDAHPGSWLAYLATDIV
                     YNGKQYDGVQKKYRPRSYDGGPKGD"
     gene            2615..>2813
                     /locus_tag="VLJ38_12885"
     CDS             2615..>2813
                     /locus_tag="VLJ38_12885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40463.1"
                     /translation="MSSLPSFDGCEVAEKVVTGPIVEVYRATQVPLGRRVTIKALAAS
                     IVPSSPFAAALEREARLLGQLN"
BASE COUNT          527 a          938 c          979 g          369 t
ORIGIN      
        1 cgcgacgctc gcgtcgagca cgttgagtcc gcccaagaga ttcacctcgg cgtcgaggcg
       61 cgtgtcgcgc aagctcacga ccacgctcgc ttgcgcggcc tgatgattga cggcctgggg
      121 tcgaaactcc tcgagcaccc ggtgcacggc gtcgcgatcg cgcacgtcga tttcgtacaa
      181 gcgcacaccc gcgggcacgt tttcgcgacg tcccgtgctc aggttgtcga gcacggccac
      241 ttcattgccg gcggcgagca gccgctcgac gacgtgactt ccgatgaacc cggctccgcc
      301 ggtgactagg acgcgcatct cgcctctcct ccggcctcga gtcgagcgat gttggaagga
      361 aagctcacgg tcgtcaaaag cggccacact tcaacgtgag atccggcgag accggtggat
      421 aggcgccggc gtcgccgagt cgcccacgag cccgacacgg gaatttctcg tctgctgtgc
      481 gaacacgacg attagagtca cgcgtccgtg gcgctcgcga gcggcccagc cgccggcctc
      541 gccggctatt cgcgtggaca atggccactc gcgccgatcg tgatctggtc ttccaagact
      601 gctcaagtcg aactcagtcg cccttcgggc cgccgtcgta cgaacgcgga cgatacttct
      661 tttgaactcc gtcgtactgc ttgccgttat aaacgatatc ggtcgcgaga tacgcgagcc
      721 agctgccggg atgggcgtcg gaggccgcca agagctcgtc ctggtgcgcc tcgatcgact
      781 tttcgtccca gaggcattgc agcgcgaggc cgatgagatt cgggtcgttc gggccgagct
      841 cgaagccgcg cacgtagtgg ggccaggcgt cggcgggacg atgcagccgg cacaaggtat
      901 cgccgaggta aatgtgcgcc atggcccagc gcggcgcgag ctcgagcgcg cggcggttct
      961 cgctgaggcg ctcgttcaag tcaccgcgcg cgcccaccat caccgaatag ttgaggtgcg
     1021 ctttggcgct ccggggcacc gcgttcttcg tcgcgcgcca gaacacgaga tcgtcggtgt
     1081 agtcgaaagc gtgcagacgc gcttgcaagg cctcgaaacc gagccaggcg ctgagcgcta
     1141 tcaccgccac gcgccgctgc tttctcaaga accaggcgca cgccgggccg agcatcaacg
     1201 cgaacccgac cgcgggcagg taccagaaac gctcggcgcg taccgtcggc aagaggatcg
     1261 gaatgttgga gtgagggaag tacgcgagcg ggacccagag tagacccact gcaacgagcg
     1321 ccgtgtgcgc gaagcagacg ctcggcgcgg cggcaaagct tcccgcgcgc cgttcgcggc
     1381 gttcgcgcag aagcgcccgc agccaggcgc cgaccgccac gagcggcggc accacgagca
     1441 ggatcgcgcc gagcacgctc gccggaaaca cgaggcgcgc ggggatcggc tccgacggaa
     1501 acgagtagtc gccgctcaag tgccaaggga aaaacagcgc gacgacgccg ctcgcgtaca
     1561 cgcgcagcgc gccggcgacg cgatggggca agtccgcgtc gatgagcgga ttgttgatcg
     1621 ggtcgtgcgg cagcggcggc tgccggaacc agcgcaaaaa agcgtgaaag acgtggacca
     1681 cgcgcggctc gcccgaaacc gccgcgatcg ccggctcggg cacgggaaag cacttgcgcc
     1741 gaagccaggt gtacagcacg agcgccagcg tcgaggctgc gagcacggcc gcggcgcgca
     1801 gcaggcgcac ggggcgcgcc gggtgcaacg ccggcgcgag cacgagcgcg gcccaggcga
     1861 cgagcggcac cccgacgatg acgctctcct tcgacagaag cccgaggaag agcgccgcga
     1921 acacgccgag cggcgcgagc cagcggagcc ggagcgcatg cagcgcgagc aacacgaaca
     1981 gacccccgag cacgtccgcg atgccgacga cgcccgagac ggcttcggtg agcaccgcca
     2041 gcacgaggaa aacgcccccg gcgaaccaag cctgcgcgcg acgccgcgtg accgccaaaa
     2101 cgaagctcgc gatcagcgcg ccgttcagtg cgtgcacgac gacattgacc gcgtgatgca
     2161 gaaacggcga gtggctcacg tgccacaaga gtctccaaac caggtccggc agcggccggt
     2221 acgagccgat gctgcgatcg gggggcagac cccaaaagtc gcgcttaaag gccgcgagga
     2281 acccgagacc ctcgccgttg acgtacgggt tggcaagcag ggcctcttgc tcgtcgaaga
     2341 tgtagttcga gagcgggctg cggacgtaca agagcgagct tacgaccagc gccggagcga
     2401 aggcgcgcaa gagtgtcgga tcgtacttcg tgaagtaggc gccgatgctc gcgccggtgt
     2461 cggcgaggaa acggcgcgcg tgcgcccgga ccgacgccgc gggaggcgcg gccgcggggc
     2521 cctcggcggg aaccgggggc agaccgggga ggtcgctcga cacgccgcgt tcgggtagca
     2581 ccgcgtcgcc aaagcgagta gtcggaaagg ccccatgagc tcgctcccga gcttcgacgg
     2641 ctgcgaggtc gccgaaaaag tcgttacggg cccgatcgtc gaggtctacc gagcgaccca
     2701 ggtgccgctc ggccggcggg tcacgatcaa ggccctggcg gcgagcatcg tgccgtcgtc
     2761 gccttttgcc gcggcgctcg agcgcgaggc gcggctactc ggccagctca atc
//
LOCUS       DATIML010000749         1923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1604489, whole genome shotgun sequence.
ACCESSION   DATIML010000749 DATIML010000000
VERSION     DATIML010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1604489"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VLJ38_12890"
     CDS             <1..193
                     /locus_tag="VLJ38_12890"
                     /inference="COORDINATES: protein motif:HMM:NF018770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1365 family protein"
                     /protein_id="HSU40464.1"
                     /translation="LALSRRPLTRRSLCVVALTRPFMSLTILAWIYGHALRLWLGGAP
                     VFPHPKQPARTLEGASDES"
     gene            183..1418
                     /locus_tag="VLJ38_12895"
     CDS             183..1418
                     /locus_tag="VLJ38_12895"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HSU40465.1"
                     /translation="MNLSHALARPIVRNEPSFFSRRLRARLRGLAHGSVTLVHSGATE
                     TFGEAVDGAPSAEVVVHHPRAFRRVALGGTLGAAESFIDGDWTTNDLTALVRVLLRNA
                     DTMSGLEAGAARYGALAARFWAALRRNTRHGSRRNISAHYDLGNDFFERMLDPTLAYS
                     SAVFPSPGATLEEASRHKLDLVCRKLALGPSDHLLEIGGGWGSLALHAAEQTGARVTT
                     TTISREQYGTTAERIRRAGLGDRITLLERDYRDLEGRFDKLASIEMIEAVGPEYYATY
                     FRRAAELLAPRGRFLLQAITIADQNYERHRREVDFIKRHVFPGSSLPSVTALLDNATR
                     ASDLRLLDLEDYGPHYARTLAEWRKNLEPHAGWVVARYGERFWRTWQFYLAYCEAGFA
                     EGYISVVQMLFERPQWRQA"
     gene            1415..>1923
                     /locus_tag="VLJ38_12900"
     CDS             1415..>1923
                     /locus_tag="VLJ38_12900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40466.1"
                     /translation="MKFLEACVLAFTLLISGSAVAGGGRVERYEGVAQTPSGEFLYRE
                     RHEVTETDGVPQKALTIYFDRAGKEIARLSSDFSRSPYAPTYRFTDERTGAQESATVT
                     ASSLKLVYRGDQKTLAVPGDAPLVVGQGLHHFARLNLERLARGPLTVAFALPSRLDTY
                     AFRIRPLASP"
BASE COUNT          309 a          675 c          614 g          325 t
ORIGIN      
        1 cctcgcgctt tcgcgccgcc cgctgacgcg ccgctcgctg tgcgtcgtcg cgctcacgcg
       61 acctttcatg agcctcacga ttctcgcctg gatctacggt cacgcgctgc gcctctggct
      121 cggcggtgcg ccggtctttc cgcatccgaa acaacccgcg cgcactctcg aaggagcctc
      181 agatgaatct tagccacgct ctcgcgaggc ccatcgtacg caacgaacca tcgttcttct
      241 cccgtcgcct gcgagcgcgc ctgcgcggcc tcgcgcacgg cagcgtcacg ctcgttcact
      301 cgggcgcaac cgagacattc ggtgaggcgg tcgacggcgc gccctccgcg gaggtcgtcg
      361 tgcatcaccc acgcgcgttt cggcgtgtgg ccctcggcgg cacgctcggc gcggccgagt
      421 cgttcatcga cggcgactgg acgacgaacg atttgacggc gctcgttcgc gtactcttga
      481 ggaacgccga cacgatgagc gggctcgaag cgggcgccgc tcgttacggc gcgctcgcgg
      541 cgcgattctg ggccgcgctt cgccgcaaca cgcgccacgg cagccggcgc aacatctccg
      601 cgcactacga cctcggcaac gacttcttcg agcgcatgct cgacccgacg ctcgcgtact
      661 cgtcggcagt ctttccgagc cccggcgcga cgcttgagga ggcgagccgc cacaaactcg
      721 acctcgtctg ccgaaagctc gcgctcggcc cgagtgatca cctgctcgag atcggcggcg
      781 gctggggttc gctcgcgctt cacgcggccg agcagacggg tgcgcgcgtg accacgacga
      841 cgatctcgcg cgagcaatac ggcaccactg ccgaacgcat tcgacgggcc gggctcgggg
      901 atcgcatcac gctgctcgaa cgtgactacc gcgacctcga agggcgcttc gacaagctcg
      961 cctcgatcga gatgatcgaa gccgtcggtc cggagtacta cgcgacctat ttccgtcgcg
     1021 cggccgagct actcgcgccg cgcggccgct ttttgctgca ggcgatcacg atcgccgacc
     1081 agaattacga gcgacaccgc cgagaggtgg acttcatcaa gcggcacgta ttcccgggga
     1141 gctcgttgcc gtcggtcacg gcgctgctcg acaacgcgac gcgcgcgagc gacctccgtt
     1201 tactcgacct cgaagactac gggccgcact acgcgcgcac gctcgcggag tggcgaaaga
     1261 atctcgagcc tcatgccggc tgggtcgtcg cgcgctacgg cgagcgcttt tggcgcacgt
     1321 ggcagttcta tctcgcctac tgcgaggcgg gctttgccga aggctacatc agcgtcgtcc
     1381 agatgctgtt cgaacgaccg caatggaggc aggcatgaaa ttcctcgaag cgtgtgtact
     1441 ggcgttcact ctgctcattt ccggctcggc cgtagccggc ggcggacgcg tcgagcgtta
     1501 cgagggcgta gcgcagacgc cgtcaggcga gtttctgtac cgcgagcggc acgaggtgac
     1561 ggagacggac ggcgtgccgc aaaaggcgct gacgatttat ttcgaccgcg cggggaagga
     1621 aatcgctcgg ctgtcgtcgg acttcagccg ctcaccgtac gcaccgacct atcgcttcac
     1681 cgacgagcga accggcgcgc aagagagcgc aacggtcacg gcgagcagcc tcaagctcgt
     1741 ctaccgcggt gaccaaaaga ccttggccgt gccgggcgac gcgccgctcg tggtgggtca
     1801 aggcttgcat catttcgcac ggctgaacct cgagcgcctc gcgcgcggac cgctcacggt
     1861 agcgttcgcg ctgccgtcgc ggctcgacac gtatgctttc cgcatccgac cgctcgcgtc
     1921 ccc
//
LOCUS       DATIML010000750         5977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_157703, whole genome shotgun sequence.
ACCESSION   DATIML010000750 DATIML010000000
VERSION     DATIML010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5977
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157703"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VLJ38_12905"
     CDS             complement(<1..236)
                     /locus_tag="VLJ38_12905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40467.1"
                     /translation="MTQPLSLTRFRELVAAYGGRLELWPHDEVSAARELLALSLEART
                     LLEQEASFDRELVAASSLPEVPATLLRRLNEVPLR"
     gene            complement(233..826)
                     /locus_tag="VLJ38_12910"
     CDS             complement(233..826)
                     /locus_tag="VLJ38_12910"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU40468.1"
                     /translation="MSHSQLIETRDEDAALVLRVGEGDVGAYRELVARYAPELLGFAT
                     RMLRDATEAEDVVQETCLRLWQHAREYKPSARVTTWLHRITHNLAIDRLRARGRLKPL
                     PDQDEDEDAMPESARQPSLIDEKRRVLALDAALAELPKRQAAALTLVHLHGLSGKEAA
                     EVLGIGAEALESLLARARRALKAGLTEPRAAGAKGAS"
     gene            complement(870..1265)
                     /locus_tag="VLJ38_12915"
     CDS             complement(870..1265)
                     /locus_tag="VLJ38_12915"
                     /inference="COORDINATES: protein motif:HMM:NF024890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HSU40469.1"
                     /translation="MKKIHVFSVLAMVMAASGAAFAHPGGGRMFERLDTNNDGKVTLA
                     EAQAGAQARFTALDKNKDGVITGDELGEGPKFMIKHADANNDGKVTLAELQAQTQTWF
                     ARFDKNSDKTITKDELQAARADHHPCPKS"
     gene            complement(1715..1939)
                     /locus_tag="VLJ38_12920"
     CDS             complement(1715..1939)
                     /locus_tag="VLJ38_12920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40470.1"
                     /translation="MPMSVDFVEMARAVGVSESCEGGELRRAAGVPVLGGVLGACGAL
                     LGRTGRGLTELGRGGFRVDGRGGTLTAFGG"
     gene            1983..2831
                     /locus_tag="VLJ38_12925"
     CDS             1983..2831
                     /locus_tag="VLJ38_12925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40471.1"
                     /translation="MSAAPATASAAPAPSEPQSDTPVELSTHAPADARMSDEERSEPS
                     STSAANAGSKARGDEERTKRPFSNTRADSPQAKGERARQNAPLRVSVPPREGTSLSRW
                     LMVSLVIAALIMGGRWYLQIRAQKAAADTERTQTAATTATDTPRATALAPSAVAVPQV
                     AETTTATAGPMAAAPSAAPETTALEAAPSAPTPSAADPSAASAAPSAASPPTPGMRVV
                     VVKISPPGARLFRKGKPIGSSPVTIELAPGEKRSFEVGMPGWVTRRLVVDGTKPEIFI
                     GLKPEK"
     gene            3039..4070
                     /gene="recA"
                     /locus_tag="VLJ38_12930"
     CDS             3039..4070
                     /gene="recA"
                     /locus_tag="VLJ38_12930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HSU40472.1"
                     /translation="MTEEKRSRSDSLREAVASIQKTYGQGAIMRCGDGAAETVDVIPS
                     GSLALDEALGVGGYPRGRIVEIYGPESSGKTTLTLHAIAQTQVNGGVAAFIDAEHAFD
                     LRYARAIGVDPARLLVSQPDCGEQALEIAETLARSNAVDLVVIDSVAALVPKAEIEGD
                     MGDAHMGLQARLMSQALRKLTAVAHRTNTCLVFINQLRQKIGVVFGNPETTPGGQALK
                     FYASVRLDVRRIGKVTLGETVVGNRTRVKLVKNKCAPPFTEAEFDIRWGVGIDVGADL
                     IETALGAGVLEKSGSHVTFGGKSIGAGRDRARDALLIDPKFYDAVKQATLEALPSQAR
                     RASAKKAAA"
     gene            4442..4939
                     /locus_tag="VLJ38_12935"
     CDS             4442..4939
                     /locus_tag="VLJ38_12935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40473.1"
                     /translation="MRTIIARMAFLGALTCVAGSIGACSADVHDNTLDVHDNNANIDN
                     AKVEITSSSDSVAAGSMVHVDVKAEDVFLCDPSTDPPADSAKVAGHLEFFIDSTTSTS
                     ILTTAEKSVDVPIPPTTPAGDHKLLCRVDKHDGTATKATSEIDIKVTASASVSGSVST
                     DTGSK"
     gene            5387..>5977
                     /locus_tag="VLJ38_12940"
     CDS             5387..>5977
                     /locus_tag="VLJ38_12940"
                     /inference="COORDINATES: protein motif:HMM:NF017009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40474.1"
                     /translation="MPLLSSSIVKHQLASMEQVEEALARQAAYGGDLLTNLLELQSLS
                     EARLSEALAEAFGFEAAQVGELPRAPEHVRRLVPVDVAQRFACYPVEEQGGILVLAVS
                     EPLPAEVENDLAFGLGVTIVQQVAPLVRVRQAVARDYGQPLDERTARALARLEGRASA
                     SPSAPPPGDQERVARPPTIAPPRAVPTLSPPLGSAAW"
BASE COUNT         1035 a         2080 c         1974 g          888 t
ORIGIN      
        1 cggagcggca cctcgttcaa acggcgcagc agcgtcgccg gcacctcggg cagcgagctc
       61 gccgcgacga gctcgcgatc gaacgacgcc tcctgctcca ggagcgtgcg tgcttccaga
      121 gagagcgcca agagctcacg cgccgcgctc acttcgtcgt gcggccagag ctcgagtctc
      181 ccgccgtacg cggcgacgag ctcgcgaaag cgcgtgagcg agagcggctg ggtcacgacg
      241 ctccttttgc gccggcggcg cgcggttccg tgagaccggc cttgagcgca cgtcgggcgc
      301 gcgcgagcag cgactcgagc gcttcggcgc cgatgccgag cacctcggcg gcctctttgc
      361 ccgaaagccc gtgcaggtgc acgagcgtca gcgcggcggc ttgacgcttg ggcagctcgg
      421 cgagcgcggc gtcgagggcg agcacacgtc gcttctcgtc gatcaggctc ggttggcggg
      481 cggattcggg catggcgtct tcgtcttcgt cttggtcagg taaaggtttc aggcggccgc
      541 gagcgcgcaa acgatcgatg gccaaattgt gcgtgatgcg gtgcagccag gtcgtgacgc
      601 gcgcgctcgg cttgtattcg cgggcgtgct gccagaggcg caagcacgtc tcctgcacga
      661 cgtcctcggc ctcggtcgcg tcgcggagca tgcgcgtcgc aaacccgagg agctctggcg
      721 cgtaccgcgc aacgagctcg cggtacgcgc ccacgtcgcc ctcgcccacc cgcagcacga
      781 gcgcggcgtc ttcgtcgcgc gtttcgatca gctgcgagtg ggacacgagc gggagctagc
      841 atgagccgga gttctcaccg agctccgctt cagctctttg ggcaggggtg gtggtcagcg
      901 cgggcggcct ggagctcgtc tttcgtgatc gtcttgtcgc tgttcttgtc gaagcgagca
      961 aaccaggttt gtgtctgcgc ttgcagctcg gcgagcgtga ccttgccgtc gttgttggcg
     1021 tcggcgtgct tgatcatgaa tttcgggccc tcgccgagct cgtcgcccgt gatgacgccg
     1081 tccttgttct tgtcgagcgc cgtgaagcgc gcctgcgcac cagcctgcgc ttcggcgagc
     1141 gttaccttgc cgtcgttgtt cgtgtcgaga cgctcgaaca tgcggccgcc accggggtgc
     1201 gcgaacgcag caccactcgc agccatcacc atcgccagca ccgaaaacac atggatcttc
     1261 ttcatggggg ggtctccttc agtccgatcc gccggcacac tgtccggctt catcaggttc
     1321 aacggagcag cgagcgagat ccgtcgctcg acgtaaaatc atgaattaac agtgacttac
     1381 gggccaaccc tgccggcgcc cgtacagttt gggcaaaatc gagcttctgg tacactccgt
     1441 cgggacgaag ctagggtcgc gaaggcatga gcaaaaacga ggaagatctc gatgaggctt
     1501 ggggagagga gcctctcgtc gcggcgcgca gcgccccaag atcggcgagc cagccgccca
     1561 gcgctccggg agcgacggcg agcacgcctt cagccacgaa cccgccacga gccttgagct
     1621 cgagctcagc gacgacgacg agcacacccc ccgccacgac gaattccgca ccgcccaagc
     1681 cggcaacgac gcccccccca aagacgacga gcagtcatcc gccgaaggcc gtgagcgtac
     1741 cgccgcgtcc gtcgaccctg aacccgccgc gcccgagctc ggtgagcccg cgccccgtcc
     1801 ggccaagcag cgctccgcac gcgccgagca cgccacccaa cacgggtacg ccagccgccc
     1861 gcctgagctc accgccttcg cacgattcac tcacgccgac cgcgcgcgcc atctccacga
     1921 agtccacgct catcggcatc cccgcccctt ccgtcgttcc gccgaaaggc cacgccaatg
     1981 acgtgagcgc cgcgccggcc acagcttccg ccgcgcccgc gccgtccgag cctcagagcg
     2041 acactccggt cgagctctcc acgcacgctc cggccgacgc gcgcatgagc gacgaggagc
     2101 gcagcgagcc gagctctacg tcggccgcca acgccggcag caaggcaaga ggcgacgagg
     2161 aacgaacgaa gcgccccttc tcgaatacgc gcgccgactc gccgcaagcg aaaggcgaac
     2221 gcgcacgcca gaatgcgccg ctgcgcgtgt cggtaccgcc gcgcgagggt acctcgctgt
     2281 cgcgctggct aatggtaagc ctcgtgatcg ccgcgctgat catgggcgga cgctggtacc
     2341 tgcaaattcg cgcgcaaaag gccgcggccg acaccgagcg cacgcagacg gccgcgacga
     2401 cggccacgga cacgccgcga gcgactgcgc tcgcgccgag cgccgtcgcc gtgccgcagg
     2461 tcgccgaaac cacgacggcc accgcagggc cgatggccgc agcgccgagt gccgcccccg
     2521 aaaccaccgc gctcgaggcg gcgccgagcg ctccgacgcc aagcgccgcg gacccgagcg
     2581 cagccagcgc ggcaccgagc gccgcgagcc caccgacccc cggcatgcgg gtcgtcgtcg
     2641 tgaagatcag cccgccgggc gcgcgcctct tccgcaaagg caagccgatc ggcagttcgc
     2701 ccgtgacgat cgagctcgct cccggcgaga agcgctcgtt cgaggtcgga atgccggggt
     2761 gggtcacgcg ccgcctcgtc gtcgacggga cgaagccgga gattttcatc gggctcaagc
     2821 ccgagaagta gcgaacgttc gccgctgcgt ggctccgcac ggacggcggc acgcgacgga
     2881 tcggtggcga acaccggcca acgattgacc gtcggggtcc tagcgcgccc catgccggct
     2941 ttttccggcg gatccgccgc ggcatgcggc gtgctctcga gtgttgccga aagcacgccg
     3001 cgccgcgcac agcgcacggc tcacgttggg aagcacacat gactgaagaa aaacgttcac
     3061 gctcggacag cttgcgcgag gcagttgcct cgattcagaa gacctacggc caaggcgcca
     3121 tcatgcgctg tggcgacggc gcggccgaaa ccgtcgacgt catcccgagc ggctccctcg
     3181 cgctcgacga agcgctcggt gtcggcggct acccgcgtgg ccgcatcgtc gaaatctacg
     3241 gacccgagtc gagcggcaag acgacgctga cgctccacgc catcgcgcag acgcaagtga
     3301 acggcggcgt cgccgcgttc atcgacgccg aacacgcgtt cgacttgcgt tacgcccgcg
     3361 cgatcggggt cgaccccgcg cgtttgctcg tgtcccaacc agattgcggc gagcaggcgc
     3421 tcgagatcgc ggaaacgctc gcgcgctcga acgcggtcga tctcgtcgtg atcgactcgg
     3481 tggcggctct cgtgccgaaa gccgaaatcg agggcgatat gggcgacgcg cacatgggct
     3541 tgcaggcgcg gctgatgagc caggccttgc gcaagctcac ggccgtggcc caccgcacga
     3601 acacttgcct cgtcttcatc aaccaacttc gccagaaaat cggggtcgtg ttcggtaatc
     3661 ccgagacgac gcccggcggg caggcgctca agttctacgc cagtgtccgg ctcgacgtac
     3721 ggcgcatcgg caaggtgacg ctcggcgaga cggtggtcgg caaccgcacg cgcgtgaagc
     3781 tcgtgaagaa caaatgcgcg ccgccgttca cggaggccga gttcgatatc cgctggggcg
     3841 tcggcatcga cgtgggcgcg gatttgatcg aaacggcgct cggcgcgggc gtgctcgaga
     3901 agagcggctc gcacgtcacg ttcggcggca agagcatcgg cgcaggacgc gaccgcgcac
     3961 gcgacgcgct cctcatcgat ccgaaatttt acgacgccgt gaagcaagcg acgctcgaag
     4021 ccctgccgtc ccaagctcgg cgcgcgagcg cgaagaaagc cgcggcctag ccgcaccgag
     4081 atccttcgcg ctgacggcgc gtgccgcggg ctccgtctcg aaaacgaacg actcggagcc
     4141 gcgcggcgcg taggccctcc gcgatccccg ctgccgtgag gctttgattc gattgcttcg
     4201 tatcgctaac aacgagtgtc gcgaaatgca cgcatggtga atcgcagcga cgaacacggg
     4261 cgtgcgtcgt tcaggtctga cccgccgaga caatgcgcct cgcagttggg ggcgcgtcgc
     4321 cacgcggcca accccgcaaa atcaaagcaa ttgctaacct ccaccgggac ggcacgtctc
     4381 ttgaagggtg acagctcgag acccaacacc atccgggtcg cttacaagga gtcgattcat
     4441 catgagaact atcattgccc gcatggcgtt cttgggcgcg ctcacgtgcg tggccggcag
     4501 catcggtgcc tgctccgcag acgtgcacga caacaccctc gacgtgcacg acaacaacgc
     4561 gaacattgat aatgccaagg tcgagatcac gtcgtcgagc gacagcgtgg ccgccggttc
     4621 catggtccac gtcgacgtca aggcggagga cgtcttcttg tgtgatccga gcaccgaccc
     4681 gcccgcggac agcgccaagg tggccggtca tctcgagttt ttcatcgaca gcacgacgag
     4741 cacctcgatt ctcacgacgg cggagaaatc cgtcgacgtc ccgatccccc cgacgacacc
     4801 ggccggcgac cacaagctcc tctgtcgggt cgacaagcac gacggaaccg ctacgaaggc
     4861 cacgtccgag atcgacatca aggtcacggc gtcggcgagc gtatccggca gcgtctcgac
     4921 ggacacgggc tcgaagtgac gtgatttagc ctggcgaatg ccgggcagcg gctgcgggca
     4981 gggtttcgac actgcccgca gcctggcggt ccacggcggg cgaccgcgtg ttcaagcaag
     5041 ggcggggtgc atcacttgca ggggcgggtg cgagaccagg ggcgcatgta gctgctctcc
     5101 cgtctcggcg agctcgcttt cggattcatg gtgcgcacgc caagagtcgc gcgggcgctc
     5161 gaattcggga cgctcaggcc gaggcagctc cagctcgagc acgaacgaac gcgaacccgc
     5221 tccgcgctca gctgaacggc gtcaagagcg acgcggcggc tctcttggcg gtccaagcgc
     5281 ggctaccgca aagcgtgcgg cggcccaatg tccggacggc agtgtgagcg gttgacacgg
     5341 gcgcgctcct cgagtgagcc taaatcgcgt atttttcccg agtctcatgc cgctcctcag
     5401 ctcgagcatc gtcaagcacc agctcgcatc catggagcag gtcgaggaag cgctcgctcg
     5461 ccaagccgcg tacggcggcg atctactcac gaacttgctc gagctgcagt cgctcagtga
     5521 agcacgactc tccgaggcgc tggcggaggc ttttggcttc gaagccgcgc aagtgggcga
     5581 gctgccgcgc gcgccggagc acgtccggcg gctggtcccg gtcgacgtcg ctcagcgctt
     5641 cgcgtgctac ccggtcgagg agcaaggcgg catcctggtt ctcgccgtca gcgagccgct
     5701 acccgcagag gtcgagaacg accttgcgtt cggtctcggt gtcacgatcg tgcaacaggt
     5761 cgcgccgctc gtgcgcgtgc gacaagccgt cgcgcgggat tacgggcagc cgctcgacga
     5821 gcgcaccgcg cgtgctctcg cgcggctcga aggtcgtgca tcggcgagcc cgagcgcgcc
     5881 tcccccgggc gatcaggagc gcgtcgcgcg tcccccgacg atcgcgccgc cccgcgcggt
     5941 gccgaccttg tccccgccgc tcggaagtgc ggcgtgg
//
LOCUS       DATIML010000751         5586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1317468, whole genome shotgun sequence.
ACCESSION   DATIML010000751 DATIML010000000
VERSION     DATIML010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1317468"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VLJ38_12945"
     CDS             <1..376
                     /locus_tag="VLJ38_12945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40475.1"
                     /translation="PPPDPGVPDVPDVVPAEPPAAVEPPVAPEPPFVVDPPVEPPAAS
                     EPPPVPPPLVVPAKAELPPLPSMAPEPPIPVALEPAWPACPASEPLLPHAAPKSAEPM
                     AHPANAEARREIKRMATPFPRG"
     gene            570..1562
                     /locus_tag="VLJ38_12950"
     CDS             570..1562
                     /locus_tag="VLJ38_12950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40476.1"
                     /translation="MNAQVLIDAIVRQTMVLIAQLSTADGVRSPLSHVADEVFVGLVR
                     ELERQKVGKKVIADMFGLALRSYQQKVQRLSESATARGVTLWGALHSFLAERESASRA
                     EILLHFKHDEEGTVRSILNDLVETGLVCRSGRGRDTRYRTATAEELEELGASEAGDAE
                     ETNAALLWVHLYPASPIKRDELAQMVPLPTAAFEAALGRLVADERARVEQRPDGAYCV
                     TERCLIPLGQAAGWEAAVVDHHRAVLKALAAKAVSGRHVSAAADEIGGTTLSFDLWPG
                     HPREQEVRALLATARKQLVSLWEEVAAYNKEHRPDETYSVTFYCGQNVTEEESE"
     gene            1559..3238
                     /locus_tag="VLJ38_12955"
     CDS             1559..3238
                     /locus_tag="VLJ38_12955"
                     /inference="COORDINATES: protein motif:HMM:NF028498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 30 beta sandwich
                     domain-containing protein"
                     /protein_id="HSU40477.1"
                     /translation="MSTRISAKYRSWLRLALAALALACDPVNKPQSIDSQTNWLRGCR
                     IDSQCDSSLSCVCGVCTKPCSEAAACATLKGTACVTSNDAAAVAQCNGAAPSAPGLCM
                     PRCDDAGCPGDQMCVAGACTPVPVADAHVSIDTRASHQTLTGFGAAVAYDEVEITSHP
                     QKAALEKTLFADLGLDVLRLRNRYGHTGDDDLTATTTLIAAASASLGRTPTLLLTSWS
                     PPATLKANGAVNCSGNAETCTLIKTAAGAFDYASFASYWRSSLDAYAAVGVQADYIGI
                     QNNPNWFPTASQVGEACIFTPSEANNTITVNGRNVTGSYPGYTEAQTATLKALRGFTP
                     LPKVLAPETSDFASVQSYLAALDPTTVDAVAHHLYGTDPENVDLAGLAATGQVAPDKP
                     LFQSEMQADGLGTAMLIHYTTTVENAAAYLQTTLTSSATGPSTNFDALVGLTATDFTI
                     RQPYYAMRHYSLNTDPGWTRVDASSSSSSLLSSAWLSPGGDALTVVLINDGTTDLSAE
                     LDVVNGEQPTHSVVSRTVFDGVERGAVLGSLSTGGVVKVPARSIVTVAFTN"
     gene            3325..>5586
                     /locus_tag="VLJ38_12960"
     CDS             3325..>5586
                     /locus_tag="VLJ38_12960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40478.1"
                     /translation="MASTRSWNARFLHVLLGSLVLVSALLARPASAQPAAAATCDPVN
                     LLAGKAPIERLNVTGDPALVTNGAIGQEGADWDAPPAITFMGAGSLTYDLGAPQSVSA
                     AFLQADANDTYRLEGSLDGTPGSYQLLTEFENARSRGHGLRERTVLFAPRTLRFLRVS
                     EGVGDGAYSIAEFAAYCRAPAPFPPVLRVEGPAPSAPPAAVTDAAGPRLALEDEGDNS
                     TRLPLLAAAGALFVLGGLSRLRRSDGADEPRKQPATGAKDAPSGQAAAPKPAAPVDSE
                     AARERRTERLLRLMFFGSGCAALIYEIVWFHLMRLVIGASALSVGIVLASFMGGMFLG
                     SLLFPRYVPADRHPLRVYGMLELGVGVCGLAMPLLLPAIRSVYVGLVGYGALGIAFRG
                     VIATVLLLPPTALMGATLPAIARRYPPGRRGMSALAWLYTTNTAGAVLGSLVSAFYLL
                     ALWDVWVATAAAAALNFAVGGLAVRLARATPTRIAGSLRDARPSTRRLPRKKVRSYAL
                     DVRSVYLAAGLSGLTALAAQVLWTRLLTLLFGATVFAFALILAVFLAGLGLGSALAAY
                     LLRRGHRPALALGWTQLLLVPSLFVSGLVLARYLPFASPPAITPVSALHGLHVVRAVL
                     VILLPAVLWGASFPFALAAAARSGNDTGRSSAYVYAANTIGAILGSLCVSFWIIPSYG
                     SAWATRLLGLAAGISAAVVFRALAVAAEKAQRPRLAPPLGAAWALGLGAVSAALVPTL
                     SPVFLAHGRYIWWV"
BASE COUNT          817 a         2020 c         1849 g          900 t
ORIGIN      
        1 gccgccgccg gacccaggcg tgccggacgt gccggatgtc gttcccgccg agccaccggc
       61 tgcagtcgag ccgccggtcg cccccgagcc gccgttcgtc gtggatccgc cggtcgaacc
      121 acccgcagcg tcggagccac cacccgtgcc accgccgctc gtcgtgccgg cgaaagcgga
      181 actgccaccg ctccccagca tggcgcccga gccgcccatc cccgtcgcgc tcgagcccgc
      241 ctggccggca tgtccagcgt cggaaccact gttaccgcac gccgctccga agagcgcgga
      301 accgatggcg caccctgcca acgccgaagc tcgaagagaa ataaagcgca tggcgactcc
      361 gtttcctcga gggtaacgca ccggcactgg tctgaggcgg gggcgcgcgg atttgccgat
      421 acgcgcgtac tcgtccgctg ctggcaaaac attgaaccca gtagcagaga acaatttcgc
      481 cccccctgga acgccgcgag cgctatcctg tgactctccg ctcatgtcct gcgctcgccc
      541 ggagcgacaa gctttagcgg tggcggaact tgaacgcgca ggtcctcatc gacgccatcg
      601 tccgtcagac gatggtcctc atcgcccagc tttccacagc cgacggcgtg cggtcgccgt
      661 tgtcccacgt ggccgacgag gtgttcgtcg ggctcgttcg cgagctcgag cgccagaagg
      721 tcggcaaaaa ggtgatcgcc gacatgttcg gcctcgccct ccgctcgtac cagcagaagg
      781 tgcagcgtct gagcgaatca gcgaccgcgc gcggcgtcac gctctggggc gcgctgcatt
      841 ccttcctcgc cgagcgcgag tcggcgagtc gggctgaaat ccttctgcac ttcaagcacg
      901 acgaagaagg cacggtccgg agcattctca acgatttggt cgagacgggg ctcgtctgcc
      961 gcagcgggcg cggccgcgac acgcgctatc gcacggccac cgccgaggag ctcgaggagc
     1021 tcggcgcgag tgaagccggc gatgcggaag agaccaacgc cgcactgctc tgggtgcacc
     1081 tctatcccgc gagtccgatc aaacgcgacg agctcgctca gatggtcccg ttgccgactg
     1141 cggctttcga agcggcgctc ggacgcctgg tggccgatga gcgcgcgcgc gtcgagcagc
     1201 gaccggacgg cgcctactgc gtgaccgagc gctgtttgat tccgctcgga caggccgcag
     1261 gttgggaagc ggcagtcgtc gatcatcacc gcgccgtgct caaggcgctg gcggccaaag
     1321 cggtgagtgg tcgtcacgtc tctgctgctg ccgacgagat cggtggtacg acgctctcgt
     1381 tcgatctctg gcccgggcac ccgcgtgagc aggaagtgcg ggcgctactc gccacggcgc
     1441 gcaagcaact cgtctcgttg tgggaagaag tcgcggccta caacaaagag caccggcccg
     1501 acgagacgta ttcggtgacg ttttattgcg gtcagaacgt gacggaagag gagagcgagt
     1561 gagcacgcgc atttccgcaa aatatcggtc ctggctccgg ctcgcgctcg ccgcgctcgc
     1621 gctcgcctgc gatccggtga acaagcccca aagcatcgac agccagacga attggcttcg
     1681 cgggtgtcgg attgactcgc aatgcgacag ctcgctgtcg tgcgtctgcg gcgtgtgcac
     1741 caagccctgt agcgaagcgg ccgcgtgcgc gacgctcaaa gggacggcct gcgtcacgag
     1801 caacgacgcc gccgccgtcg cgcagtgcaa cggcgcagcg ccctcggcgc ccggcttgtg
     1861 catgccgcgc tgcgacgacg cgggttgccc gggggatcag atgtgcgtcg ccggcgcgtg
     1921 cacgcccgtg ccggtcgccg acgctcacgt ctcgatcgac acgcgtgcgt cacatcagac
     1981 gctgacgggg ttcggcgccg cagtcgccta cgacgaagtc gagatcacga gccacccgca
     2041 aaaggctgcg ctcgaaaaga cgctcttcgc cgacctcgga ctcgacgtgc tgcggctgcg
     2101 caaccgctac ggccacaccg gtgacgacga tctcaccgcc acgaccacgc tcatcgccgc
     2161 cgcctcggcg agcctcggtc gcacgccgac gctcctgctc acttcctgga gcccacccgc
     2221 gacgctcaag gcgaacggcg ccgtgaactg cagcggcaac gccgagactt gcacgctgat
     2281 caagacggcg gcgggcgcct tcgactacgc gagtttcgcg agctactggc ggagctccct
     2341 cgacgcctac gccgccgtcg gcgtccaggc ggactacatc ggcattcaga acaacccgaa
     2401 ctggtttccc accgcgtccc aggtcgggga agcgtgcatt ttcacgccgt cggaagccaa
     2461 caacaccatc acggtgaacg gccgcaacgt gaccgggtcg taccccggct acaccgaagc
     2521 acagaccgcg acgctcaagg cgctccgcgg cttcaccccg ctgccgaagg tgctcgcgcc
     2581 cgaaaccagc gactttgcga gcgtgcagag ctacctcgcg gcgctcgatc cgacgaccgt
     2641 ggacgccgtc gcgcaccatc tgtacggcac cgatcccgaa aatgtggatc tcgccggcct
     2701 ggccgcgacg ggacaggttg cgcccgacaa gccgcttttc cagtccgaga tgcaggcgga
     2761 cggcctcggc accgcgatgc tcatccacta cacgacgacg gtggagaacg ccgccgcgta
     2821 cctgcagacg acgctcacga gctcggcgac gggcccttcg acgaacttcg acgcgctcgt
     2881 cggcctgacg gcgaccgatt tcacgatacg ccagccgtac tacgcgatgc ggcactactc
     2941 gctcaacacc gacccgggtt ggacgcgcgt cgacgcgagt tcgagctcga gctcgctgct
     3001 ctcctcggcg tggctctcgc ccggaggcga cgcgctcacc gtcgtgctca tcaacgacgg
     3061 cacgactgat ctcagcgccg agctcgacgt cgtcaacggc gagcagccga cgcactcggt
     3121 cgtgagccgc acggtgttcg acggcgtcga acgcggagcg gtgctcggta gcctctcgac
     3181 gggcggcgtg gtcaaggtgc ccgcccgctc gatcgtcacg gtcgccttca cgaactgagg
     3241 cagtaaactc ggcttttcgc gcgcccgcgc ggcgaagcgc gggatttggg ccatgcgcgt
     3301 cgacacgtcg ggtacaagat cggcgtggca tcgacccgct cttggaacgc tcggttcctg
     3361 cacgtccttc tcggctcgct cgtgctcgtc tcggcgctgc tggcgcggcc tgcgtccgcg
     3421 cagccggcgg ctgccgcaac ctgcgacccc gtgaacctgc tcgcaggcaa agcgccgatc
     3481 gagcgcctca atgtcacggg tgatcccgcc ctggtcacga acggcgcgat cggccaagag
     3541 ggcgcggact gggacgcgcc gcctgcgatc acgttcatgg gcgcaggctc gctcacttac
     3601 gatctcggcg ccccgcaaag cgtaagcgcc gcgttcctcc aagccgacgc gaacgacacc
     3661 tatcgcctcg aaggctccct cgacggcacc cccggcagct atcaactgct gacggagttc
     3721 gagaacgcgc gcagccgtgg ccacggcttg cgcgagcgca cggtgctgtt cgcgccgagg
     3781 acgctgcgct tcttgcgcgt gagcgaaggc gtcggcgacg gcgcgtactc tatcgccgag
     3841 tttgcggcgt actgccgagc tcccgcgccg tttccgcccg ttctgcgcgt cgaaggccct
     3901 gcgccgagcg cgccgccggc tgccgtgacg gacgcggccg gcccgcgcct tgcgctcgag
     3961 gacgagggcg acaattcgac gcgattaccg ctgctcgcgg ccgctggcgc gctcttcgtg
     4021 ctcggcggct tgtcgcggct gcgccgatcg gacggcgctg acgagccgcg caagcagcca
     4081 gcgacaggcg ccaaggacgc gccctcgggc caggcggcag cgccgaaacc cgcagcgccg
     4141 gtcgactcgg aggccgcgcg cgagcggagg acggagcgcc tgctgcggct catgttcttc
     4201 ggcagcggct gcgcagcgct catctacgaa atcgtctggt ttcacttgat gcgcctcgtg
     4261 atcggcgcct cggctctgtc ggtcgggatc gtgctcgcga gcttcatggg cggcatgttc
     4321 ctcggcagcc tgctcttccc gcgctacgtg ccggccgacc gccatccgct gcgcgtctac
     4381 ggcatgctcg agctcggcgt gggcgtgtgc ggcctcgcga tgccgctgct cttgccggcc
     4441 attcgctcgg tgtacgtcgg gctcgtcggc tacggcgcgc tcggcatcgc gttccgcggc
     4501 gtgatcgcca ccgtgctgct cttgccgccg accgcgctca tgggcgcgac gctgcccgcc
     4561 atcgcgcgcc gctatccgcc ggggcgccgc ggcatgtccg ccctcgcctg gctttacacc
     4621 acgaacaccg ccggcgccgt gctcggcagc ctggtctcgg cgttctactt gctcgcgctc
     4681 tgggacgtgt gggtcgcaac cgccgctgcc gcggcgctga atttcgccgt cggtgggctc
     4741 gccgtgcggc tagcgcgcgc gacgccgacg aggatcgccg gcagccttcg cgacgcccgg
     4801 ccgagcaccc gtcggctgcc cagaaaaaag gtgcgcagct acgcgctcga cgttcgcagc
     4861 gtgtacctgg cggcgggact ttccgggctg acggcgctcg cggcgcaggt gctctggacg
     4921 cggctcttga cgctgctctt cggcgcgacc gtgttcgcgt tcgcgctcat cttggccgtg
     4981 tttctcgcgg gcctcgggct cggcagcgcg ctcgccgcgt acctgctccg ccgcggtcac
     5041 cggccggcgc tcgcgctcgg ctggacgcag ctcttgctcg tgccgagcct gttcgtctcg
     5101 ggcctcgtgc tcgcgcggta cctgccgttc gcgtcgccgc cggcgatcac gccggtgagc
     5161 gcgctgcacg gactccacgt ggtgcgcgcg gtgctggtga ttctcttacc ggccgtgctc
     5221 tggggcgcaa gcttcccgtt tgcgctcgcc gccgcggcgc gctccgggaa cgacaccggg
     5281 cgttcgagcg cctatgtcta cgccgcgaat accatcggcg cgatccttgg ctcgctgtgc
     5341 gtgagttttt ggatcatccc gagctacggc tcggcctggg cgacgcgact gctcggctta
     5401 gccgccggca tttccgccgc cgtcgtcttc cgtgcgctcg cggtggcggc cgaaaaggcg
     5461 caacgcccgc ggcttgcgcc accgctcggc gccgcctggg cgctcggcct cggcgcggtc
     5521 agcgcggcgc tcgtgccgac gctatcgccc gtctttctcg cgcacggccg ctacatctgg
     5581 tgggtc
//
LOCUS       DATIML010000752         2667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4488917, whole genome shotgun sequence.
ACCESSION   DATIML010000752 DATIML010000000
VERSION     DATIML010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4488917"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..574
                     /locus_tag="VLJ38_12965"
     CDS             <1..574
                     /locus_tag="VLJ38_12965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40479.1"
                     /translation="LLVQAVARSSYASDTLVIVAEDDCQDGPDHVDSHRATTYFAGPY
                     VKQGAVVSTAYSQVNLLRTIEDLLGTEHLNLNTAFQPAMSDAFDTRSSGKWTFQAQAS
                     TVLQTTELAPLVTTLGAVYTAGPSVTPAHTADYWAARTAGFDFSEADRVPTAAFNRVL
                     WKGLKGSVPYPTLLSQSHVALSRVSAARDD"
     gene            555..1427
                     /locus_tag="VLJ38_12970"
     CDS             555..1427
                     /locus_tag="VLJ38_12970"
                     /inference="COORDINATES: protein motif:HMM:NF021454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2167 domain-containing protein"
                     /protein_id="HSU40480.1"
                     /translation="MRLATTERTNARPGPLDEDESGPSSWQAGPASIELDHGIELELS
                     AAYRFLPKEPAKKALEKNGNYHNENLLGLAGSADGTHAWFAVLTYDEEGYIKDDEKID
                     ADELLSGMRDGVKELNQERQKHGFNPLAVEGWADPPRYDRSRHELVWALVVSDPDGKS
                     VNYNTRVLGRRGYVSLDLVTDPEQLGAHRSDASALLAGTHFVNGARYQDFDAKKDKVA
                     EYGLTGLIMAGAGLGAAKLIKIGLIAKFWKVILALIIAGKKAVAAAVIGALAFFKRLF
                     GAKKKDEPQVAPPP"
     gene            complement(1369..2301)
                     /locus_tag="VLJ38_12975"
     CDS             complement(1369..2301)
                     /locus_tag="VLJ38_12975"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSU40481.1"
                     /translation="MTVIVQPNTGLPVPQPPRPEPRFEERVAGSPVPASAPPQRRGLG
                     AAGAVLLALLAKGKGLLLLLKGLPLAKLLLTSASMFAMIAFEARRSGVWFAVGFVLTI
                     LVHELGHGYAMKRNGVQAGWPVFIPFFGAMIAMKGEPQDREIEARIAYGGPLAGTAAS
                     LVAAGLGLATESRVLLAIAYTGFFLNLFNLTPFSPLDGGRVAQAFSRRAWIFGALVMG
                     GMFFLTHAPQLALIAVMALPRLFGRNTDTREVLPRSRQLGWAARYFGLAVFLAAGLYF
                     TAALLHPAARDDQDGVMAGAPPVARPSFSHRTGV"
     gene            complement(2362..>2667)
                     /locus_tag="VLJ38_12980"
     CDS             complement(2362..>2667)
                     /locus_tag="VLJ38_12980"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HSU40482.1"
                     /translation="RVLHGGGDGTFASVSNNAVRAQPGALMLGDKNRDGNLDVVLADD
                     ALSVLFGRGDGTFFCAQDYLTGKGPTAFSLGDLNGDGRLDVAALYSNSVRVLLNAAP"
BASE COUNT          514 a          871 c          914 g          368 t
ORIGIN      
        1 gctcttggtg caggccgtgg cgcggagttc ctacgcttcc gacacgctcg tgatcgtggc
       61 cgaagacgac tgccaagacg gccccgatca cgtggactcg caccgcgcga ccacgtattt
      121 cgccggaccg tacgtcaagc aaggcgcagt cgtgagcacg gcgtacagtc aggtcaactt
      181 gctccgcacg atcgaggacc tgctcggaac ggagcacttg aatctgaaca ccgccttcca
      241 gccggccatg agcgacgcgt tcgacacgcg ctcctcaggc aagtggacgt tccaggcgca
      301 agcgtcgacg gtgctccaga cgacggagct cgcgccgctc gtcacgacgc tcggcgccgt
      361 ctacaccgcg ggcccgagtg tcacacccgc ccataccgcg gactactggg cggctcgcac
      421 cgccggcttc gacttctccg aagcggatcg agtgccgacg gcggccttca atcgagtgtt
      481 gtggaagggc ttgaagggca gcgtcccgta cccgacgctc ttgagtcaga gtcacgtggc
      541 cctgagccgc gtgagtgcgg ctcgcgacga ctgagcgcac gaacgcgagg ccggggccgc
      601 tggacgagga tgagagcggt ccctcgtcgt ggcaagcggg gccggcgagc atcgagctcg
      661 accacggcat cgaactcgag ctttccgccg cgtatcgctt tctgcccaag gaaccggcga
      721 agaaggcgct cgagaagaac ggcaactacc acaacgaaaa tctgctcggg ctcgcgggga
      781 gcgccgacgg tacgcacgct tggttcgcgg tactcacgta cgacgaagag gggtacatca
      841 aggacgacga gaagatcgac gcggacgagc tcttgtcggg catgcgcgac ggcgtgaagg
      901 agctcaacca agagcgacaa aaacacggct tcaatccgct cgccgtcgaa ggctgggccg
      961 atccaccgcg ctacgatcgg agccggcacg agctcgtgtg ggcgctcgtc gtgagcgacc
     1021 ccgacggcaa atccgtcaac tacaacacgc gcgtcctcgg ccgccgcggc tacgtctcgc
     1081 tcgacctcgt gaccgacccc gagcagctcg gcgcgcatcg ttccgacgcc agcgcgctac
     1141 tcgcgggcac gcacttcgtg aacggggcgc gttatcaaga cttcgacgca aaaaaggaca
     1201 aggtcgccga gtacgggctc acagggctca tcatggccgg cgccggcctt ggcgccgcaa
     1261 agctcatcaa gatcggactc atcgcgaaat tctggaaggt catcctggcg ctgatcatcg
     1321 cgggcaagaa ggcggtagcc gcggccgtga ttggcgcgct cgcgttcttc aaacgcctgt
     1381 tcggtgcgaa aaagaaggac gagccacagg tggcgccccc gccatgacgc cgtcctggtc
     1441 gtcacgcgcg gccgggtgaa gcagcgcagc agtgaagtag agcccggcgg cgaggaacac
     1501 ggccaggccg aaataacgcg ccgcccagcc gagctgccgc gacctcggca aaacttcgcg
     1561 cgtatcggtg ttgcggccga agaggcgcgg caacgccatg accgcgatca gcgcgagctg
     1621 gggcgcgtgc gtcaggaaga acatgccgcc catgacgaga gcgccgaaaa tccaagctcg
     1681 acgcgaaaac gcctgcgcga cgcggccgcc gtcgaggggc gaaaacggcg tgaggttgaa
     1741 caggttcaga aagaaccccg tgtaggcgat cgccaagagc acgcgcgatt cggtggcgag
     1801 gccgagcccg gcggcgacga gcgacgcggc cgtgccggcg agcggcccgc cgtaggcgat
     1861 gcgagcctcg atctcacgat cctgcggctc gcccttcatg gcgatcatgg cgccgaaaaa
     1921 cgggatgaac acgggccagc ctgcctgcac accgttgcgc ttcatggcgt aaccgtggcc
     1981 gagctcgtgg acgaggatcg tgagcacgaa gccgacggcg aaccagacgc ccgagcgccg
     2041 cgcctcgaac gcgatcatcg cgaacatcga cgcgctcgtg agcaagagct tcgcgagcgg
     2101 caagcccttg agcaggagca agagcccctt gcctttggca aggagcgcca agaggacggc
     2161 accggccgcg ccgaggccgc ggcgttgggg cggcgcactc gcggggaccg gagagccggc
     2221 gacgcgttcc tcgaagcgtg gctccgggcg gggcggctgg gggacgggca aacccgtatt
     2281 tggttgcacg atgaccgtca cgcgagcttg gcacggcctg agtgcgtcgg ccaagccgcg
     2341 cctcgaagcg agcgggtcgg gctatggcgc agcgttcaaa aggacgcgca ccgagttcga
     2401 gtagagcgcg gcgacgtcga gccgtccgtc gccgttcaga tcgccgaggc tgaacgccgt
     2461 gggccctttg cccgtcaagt agtcctgagc acaaaagaag gtgccgtcgc cgcgtccgaa
     2521 gagcacgctg agcgcgtcgt ccgccaaaac tacgtcgagg ttgccgtccc ggttcttgtc
     2581 gccgagcatg agcgcgcccg gctgcgctcg gacggcgttg ttcgagacgc tcgcgaaggt
     2641 gccgtcgccg ccgccgtgga ggacgcg
//
LOCUS       DATIML010000753         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1026096, whole genome shotgun sequence.
ACCESSION   DATIML010000753 DATIML010000000
VERSION     DATIML010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1026096"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1012
                     /locus_tag="VLJ38_12985"
     CDS             <1..1012
                     /locus_tag="VLJ38_12985"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HSU40483.1"
                     /translation="HGAFGAIAFGIGTTQVRDVLATQTLSLAPLKVRRIEVTGRLRAG
                     VYAKDVILHVIRKLGVNGGTGYAYEYAGDAVSALSMEERMTLCNMSIEGGARVGYVNP
                     DETTFEYLKGREFSPQGAAWERALEYWRSIASDADATYDDVVRFDANDIAPTVTWGIN
                     PGQAISIEENVPRTEDAHSPAEQASIKEALEYMQLEPGKPIQGVPVNVAFIGSCTNGR
                     LSDFREVARHIRGKKVAPGVRALAVPGSMDVARAAEAEGLDQVFREAGWEWRQPGCSM
                     CLAMNPDRLIGRELCASSSNRNFKGRQGSPTGRTILMSPVMVAAAAVSGRIADAREVF
                     KA"
     gene            1038..1640
                     /gene="leuD"
                     /locus_tag="VLJ38_12990"
     CDS             1038..1640
                     /gene="leuD"
                     /locus_tag="VLJ38_12990"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020464811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HSU40484.1"
                     /translation="MALAKIQQLTGTAVYVPGSDIDTDRIIPARFMKCVTFDGLGAYL
                     FHDARVDENGAKKGHPLDDPRFAGASILLSNANFGCGSSREHAPQALAKHGIRAVVAE
                     SFAEIFFGNSTTLGMPCVSVSHEDVEALARVIEAQPSVPVTIDLVAGTVSAGSLTVRS
                     SMKPAARDALVNGEWDPIAQLLDGAEATRKVAAELPYLTL"
     gene            1759..>2001
                     /locus_tag="VLJ38_12995"
     CDS             1759..>2001
                     /locus_tag="VLJ38_12995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/ABC1/UbiB kinase family protein"
                     /protein_id="HSU40485.1"
                     /translation="MVRSLRALMLFWTIFASYGLTYARSLVARKARRERLFEAAHKKN
                     ARRLAHGFSSLRGVFIKMGQVLGVTGTFLPPAFSEAL"
BASE COUNT          332 a          677 c          670 g          322 t
ORIGIN      
        1 gcacggcgcg ttcggtgcca tcgcgttcgg catcgggacg acgcaggtgc gtgacgtgct
       61 cgcgacgcag acgctgtcgc tcgcgccgct caaggtgcgg cgcatcgagg tgacggggcg
      121 cttgcgcgcg ggcgtgtacg cgaaagacgt gattttgcac gtgatccgca agcttggcgt
      181 gaacggcggc accggctacg cctacgagta cgcgggcgac gccgtgagcg cgctcagcat
      241 ggaggagcgc atgacgctct gtaacatgtc gatcgaaggc ggcgcgcgcg tcggctacgt
      301 gaaccccgac gagacgacct tcgagtactt gaagggtcgc gaattttcac cccagggtgc
      361 ggcctgggaa cgcgcgctcg agtactggcg ctcgatcgct tccgatgcgg acgcgacgta
      421 cgacgacgtc gtgcgcttcg acgcgaacga catcgctccg accgtgacct ggggcatcaa
      481 cccgggccag gccatcagca tcgaagagaa cgtgccgcgc accgaggacg cccactcgcc
      541 cgccgagcag gcttcgatca aagaagcgct cgagtacatg cagctcgagc ccggcaagcc
      601 gattcaaggc gtgcccgtga acgtcgcgtt catcggcagc tgcacgaacg gacggctctc
      661 ggattttcgc gaagtcgcgc gtcacatccg cggtaaaaag gtcgcgccgg gcgtacgcgc
      721 gctcgccgtc cccggctcga tggacgtggc tcgcgcggcc gaagccgaag ggctcgacca
      781 ggtattccgg gaagccggtt gggaatggcg ccagcccggt tgctcgatgt gcctcgccat
      841 gaacccggat cgtttaatcg gccgcgagct ctgcgcgtcg tcgtcgaacc gcaacttcaa
      901 aggccgccaa ggcagcccta cgggccgcac catcctcatg agcccggtca tggtcgccgc
      961 cgccgccgtg agcggccgca tcgccgacgc gcgcgaagtg ttcaaagcct gaggatttga
     1021 ggagaaggaa accgaacatg gctctcgcga aaatccaaca actcaccggc accgccgtct
     1081 acgtcccggg ctccgacatc gacaccgatc gcatcatccc ggcgcgcttc atgaaatgcg
     1141 tgaccttcga cgggctcggc gcgtacttgt tccatgacgc gcgcgtcgac gagaacggcg
     1201 cgaagaaggg gcacccgctc gacgatccgc gcttcgctgg ggcgagcatt ctgctctcga
     1261 acgcgaattt cggttgtggc tcgtcgcgcg agcacgcgcc gcaagcgctc gccaagcacg
     1321 ggatccgcgc ggtcgtggcc gagagcttcg ctgaaatctt cttcgggaac tcgacgacgc
     1381 tcggcatgcc gtgcgtctcg gtctcgcacg aggacgtgga ggcgctcgcg cgcgtgatcg
     1441 aagcgcagcc gagcgtgccc gtgacgatcg acctcgtggc gggcacggtg agcgccggta
     1501 gtctgaccgt acgctccagc atgaaacccg ccgcgcgcga cgccctcgtc aacggcgagt
     1561 gggatcccat cgcgcagctc ctcgacggcg ccgaggcgac gcgaaaagtc gcggccgagc
     1621 tgccgtacct cacgctctga gccgagcggc gcttctcgcg cccgctcgga gtggcgctgg
     1681 cccgcgccga acgttcccga tcggcgcggc cggtcgctcg cgtgcggcaa tctcgggcgc
     1741 agggtgtagg ctagcgtcgt ggtccgctcg ctgcgcgccc tgatgctctt ctggacgatc
     1801 ttcgcgtcct acgggctcac gtacgctcgc tcgctcgtcg cccgtaaggc gcggcgcgag
     1861 cgcctgttcg aggccgcgca caaaaagaac gcgcgccgtc tcgctcacgg cttctcgtcg
     1921 ctccgaggcg tattcatcaa gatggggcag gtgctcggtg tcaccggcac gtttctgccg
     1981 cccgcgtttt ccgaagcgct c
//
LOCUS       DATIML010000754         5653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5646379, whole genome shotgun sequence.
ACCESSION   DATIML010000754 DATIML010000000
VERSION     DATIML010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5653
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5646379"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1143)
                     /locus_tag="VLJ38_13000"
     CDS             complement(<1..1143)
                     /locus_tag="VLJ38_13000"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40486.1"
                     /translation="MKETGVGEGQVLGRYELLLRVAQGGMARVWAARLHGTRGFRKLV
                     AVKTILPNVMDSERLEQMFLEEATLASGIHHPNVVDTIELGEQDGVLFMALEWVDGES
                     LSLVMQEAHKVGGVPLPIGVNLVVQACKGLHAAHELADETGAPLGVVHRDVSPHNVLV
                     SFSGLAKVVDFGIAKATQRASTLTEAGEVKGKLAYMAPEQIRGRAVDRRTDVFALGTL
                     LYQLTTGRHPWKGDHPGETTERLCSDRPVTPPSAFVDDYPEALEAAVQKALEKDPDKR
                     FATAERFLAALEEAVPSSLEGNAEARIAEFMQKLVGPRGVERRKQIRLAGDLLDQRRA
                     LSGTVTTTTGTSGSTGAVAVDAGVSSSRLSVVGQPGPTAMTPSIRVE"
     gene            complement(1344..2564)
                     /gene="ilvA"
                     /locus_tag="VLJ38_13005"
     CDS             complement(1344..2564)
                     /gene="ilvA"
                     /locus_tag="VLJ38_13005"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR01127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006549 - isoleucine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HSU40487.1"
                     /translation="MSDDEVTLERIRAARARLSGRVLSTPCRLSARLSERLGNPVYLK
                     LESLHPTGSFKERGACNRILLLSEAERACGVIAASAGNHAQAVARHAAALGIRATVVM
                     PETTPLVKVTAARRLGAEVVLHGQSYDEASERALELVREQGLTLIHPFDDPDVIAGQG
                     TIGLELLEQLPDVAAVVVPIGGGGLIAGVAVAVKALAPNVRVYGVESRTFPGMKHAVE
                     QSSPPSILGGKSIADGIAVRRVGRLTRRLVAQSVDDIALVEEEEIAEAILFLLEADKT
                     VAEGAGAVGVAALMHARTPPVSGPVAVVVSGGNIDVNLVSRVIERGLVQTGRTARFRV
                     VLPDVAGALAELASAVADLRANILEIQHDRAFAGVELGQTLVELVLETRGHEHVEEVR
                     NELTRRFTLHPRVS"
     gene            2881..5490
                     /locus_tag="VLJ38_13010"
     CDS             2881..5490
                     /locus_tag="VLJ38_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40488.1"
                     /translation="MRDESRADPSTPVPIDREKVLQSAQKYVEKKKYDRAIAEYQRVI
                     QDDPNDARTLLKIGDLQARLQAFPEAIATYDRVGQYYASQGFALKAIAVYKQIRELIK
                     KHAPALADRYGHIVPKLAEIYTQLGLTSDALAAYDEVATRLQRGGRDREAIDVFRRMV
                     ELDPSNPLPHLRLAEACCRVQSLDEAIELFWRAAELLLGLGRREDALKVVERILHFRV
                     DARFARVAAELYLERGSREDGLQALSKLQVCFQTDPRDLDTLTLLARAFQLIGQDAKA
                     LEVHKEMARIAREQGKVELYKQLLKHLRQIAGDDEGVRALESVRAPSPSSAPPSSSVP
                     VSIADSAVDFVEETMGKSSSTTSLPPDIIIVDEPQPVIEEVVEPGPSFDARAHAKKAI
                     VDADSFKRLRLYPKAIETLHIALEIEPRSLDIRAKLRELLIESGDREGAITETVNLAA
                     LHLDRGEHFEAETLLREVIEVEPTHAAALAMLEQLPSPIAPSETTSTTTAASPPVLDT
                     FDPDAPLPSYDLEEVGADQALHRGTTNTTGPKLLIVDEPFAPEEARALPSYGQTNADA
                     AGFDEVVDEISVIEEAPPVHVPPDLEVLEEALDEAEFFVARGLHEDARAILQDQLART
                     PNHRLVLERLREVEESLAAAGSSQTIDRSLLGAAASAPAVPAADVAASLGALDDLDPP
                     ESMRSSEVTSSMVDVDVDQVFAKFKAGVRAQVVEADSATHYDLGVAYKEMGLVTEAIT
                     EFEQAARDPHRECMCFAMIGLIYLEQGQLERSAEAYVKALGAQSKTVEQEMNLYYDLG
                     TVYEMKGQKGDALYYFQKIARRDPGYRDVADRLNALDPSIQQVKPAPTARAVNDDDDF
                     DRAFNDLFEGKGS"
BASE COUNT          949 a         1968 c         1874 g          862 t
ORIGIN      
        1 ctccacgcgg atcgacggtg tcattgccgt cgggccaggc tgccccacga cgctgagccg
       61 gctcgaggag acgccggcat ccaccgcgac ggcgcccgtc gacccgctcg tgcccgtcgt
      121 cgtcgtgacc gtgccggaga gcgcgcggcg ctgatccaaa aggtcacccg ccagccggat
      181 ttgcttgcgc cgctcgacgc cgcgcggccc gacgagcttc tgcatgaact cggcgatgcg
      241 cgcctcggcg ttgccttcga gcgagcttgg caccgcttcc tcgagcgcgg cgagaaaacg
      301 ctcggcggtc gcgaagcgtt tgtcaggatc cttctcgagc gccttctgca cggcggcttc
      361 gagcgcctcc gggtagtcgt cgacgaacgc cgacggcggc gtgaccggac gatcggagca
      421 gagccgctcg gtggtctcgc ccgggtggtc gcccttccag gggtgacggc cggtcgtgag
      481 ctgatagagc agcgtgccga gcgcgaagac gtccgtacgc cggtcgacgg cgcggccgcg
      541 aatctgctcg ggcgccatgt aggcgagctt gcctttgacc tcgcctgcct cggtgagcgt
      601 cgaggcgcgc tgcgtggcct tggcgatgcc gaaatcgacc actttggcga gaccgctgaa
      661 cgagacgagc acgttgtgcg gagaaacgtc gcgatgcacg acgccgagcg gcgcgcccgt
      721 ttcgtcggcg agctcgtgcg cggcgtgcag gcccttgcaa gcctgcacga ccaagttgac
      781 gccgatcggc aagggcacgc cgccgacctt gtgcgcctcc tgcatcacca ggctgagcga
      841 ctcgccgtcc acccactcga gcgccatgaa gagcacgccg tcctgctcgc cgagctcgat
      901 cgtatcgacg acgttcgggt ggtgaatgcc ggacgcgagc gtcgcttcct cgaggaacat
      961 ctgctcgagc cgctcgctgt ccatgacgtt cggcaggatg gttttgactg caacgagctt
     1021 acggaagccg cgcgtaccat gtaggcgagc cgcccagacg cgcgccatgc cgccctgcgc
     1081 cacacgcagc aagagctcgt agcgtccgag tacttgccct tcgccgaccc ccgtctcctt
     1141 catgttcgca acgcccgttc ccgcgagatt ttcgcggtgc gagcgccttg ggtcagtttc
     1201 acgattttca cggtgagtcc cccaacgtct cccccggttt cgaacttaac gccggggcga
     1261 gcgcccccat tatctgaggg ggcgagcgcc gcaccttgcg gcacagctgc gcactcggcg
     1321 tggaggcgag acgcgcgccg cgctcaggac acgcgcgggt gcagcgtgaa gcgtcgcgtg
     1381 agctcgttgc gcacttcctc gacgtgctcg tgtccgcgcg tctcgagcac gagctcgacg
     1441 agcgtttgcc cgagctcgac gcccgcgaac gcccggtcgt gctggatctc gaggatgttg
     1501 gcgcgcaagt cggcaacggc gctcgcgagc tcggcgagcg cgcccgcgac atcgggcagc
     1561 accacgcgaa agcgcgccgt gcgtcccgtc tgcacgagcc cgcgctcgat cacgcgcgag
     1621 acgaggttca cgtcgatatt gccgccgctc accaccaccg cgacggggcc cgatacgggt
     1681 ggggtccgcg cgtgcatcag cgccgcgacg ccgacggcgc cggcgccctc cgccacggtc
     1741 ttgtcggcct cgagcaagaa cagaatcgct tcggcgatct cctcctcctc cacgagcgcg
     1801 atgtcgtcga cgctctgcgc gacgagacgt cgcgtgagcc gaccgacgcg ccgcacggcg
     1861 atgccgtcgg cgatcgattt gccgccgagg atcgacggcg gtgacgactg ttcgaccgcg
     1921 tgcttcatcc cggggaacgt gcgcgactcg acaccgtaga cgcgcacgtt cggcgccagc
     1981 gccttcacgg cgacggccac cccggcgatc aagccgccac cgccgatcgg caccacgact
     2041 gcggccacgt ccgggagctg ttcgaggagc tcgagcccga tcgtcccctg ccccgcgatc
     2101 acgtccgggt cgtcgaaggg gtgaatcagg gtgaggccct gttcgcgcac gagctcgagc
     2161 gcacgctcgg aggcttcgtc gtagctctgg ccgtgcagca cgacctcggc gcccagccgg
     2221 cgcgcggccg tcactttcac gagcggggtc gtctcgggca tcacgacggt cgcgcggata
     2281 ccgagcgccg ccgcgtgccg cgcgaccgcc tgagcgtgat ttcccgcgct cgccgcaatc
     2341 acaccgcacg cgcgctccgc ctcggacaag agcaggatgc gattgcacgc gccgcgctcc
     2401 ttgaagctgc ccgtcgggtg aagggattcg agcttcaggt agactggatt cccgaggcgc
     2461 tcgctgagtc gtgcgctcag ccggcaaggc gtcgagagca ctcggccgga cagccgtgcg
     2521 cgcgccgcgc gaattcgttc gagcgtgacc tcgtcgtcac tcatgggggt tcgagtctcg
     2581 gtcccggcgc cggaaaacgc cacgtgaagc aggcgatcgt tcgccggccg atgggggttg
     2641 agcggcgtaa aggtagtgcc gcctcgcacc ttcaccaagc gccgacgaca cgggccggtg
     2701 aggggcgcgg ctcggggagg tgtgcgcgag cgagctacgc aaaaaaacgc ccctgagcca
     2761 tgccgcccgc atggctcaaa ggagaacgct aacgcgtggt tcggcccgtg cgttcgttga
     2821 ccgactgggc cgactgacct atgcttctgt gcttccgaac gtctctcgct gcgcgagcgc
     2881 atgcgcgacg aaagtcgtgc ggatccatcc acgcccgtgc ccatcgaccg cgagaaagtc
     2941 cttcagtccg cccagaagta cgtcgagaag aagaagtacg accgggcgat cgctgaatat
     3001 cagcgggtca ttcaagacga cccgaacgac gctcgcacgc tcctcaagat cggcgactta
     3061 caggcgcgcc tgcaagcgtt ccccgaggcg atcgcgacgt acgatcgagt cgggcagtac
     3121 tacgcgtcgc agggcttcgc gctcaaggcc atcgccgtct acaagcagat ccgcgagctc
     3181 atcaagaagc acgcgcccgc cctcgccgac cgctacggtc acatcgtccc gaaactcgcc
     3241 gagatttaca cgcagctcgg cctcacgagc gatgctctcg ccgcctacga cgaggtcgcg
     3301 acccggctgc aacggggcgg tcgcgatcgc gaagccatcg acgtgtttcg gcgcatggtc
     3361 gagctcgacc cgtcgaaccc gctcccgcat ctgaggctcg cggaagcctg ctgccgcgtg
     3421 cagagcctcg acgaggcgat cgagctcttc tggcgcgccg ccgagctttt gctcggactc
     3481 ggacggcggg aagacgcgct caaggtcgtg gagcgcattt tgcacttccg cgtcgacgcg
     3541 cgtttcgcgc gcgtcgccgc cgagctgtac ctcgagcgcg gctcacgcga ggacgggctg
     3601 caagcgctct cgaaactcca ggtctgcttc cagaccgatc cgcgcgacct cgacacgctc
     3661 acgctgctgg cccgcgcctt ccagctcatc gggcaggatg ccaaggccct cgaggtgcac
     3721 aaggaaatgg cgcgcattgc ccgggagcag ggcaaggtcg agctctacaa gcagctcctc
     3781 aagcacttgc gccagatcgc gggcgacgac gagggcgtcc gagcgctcga gagcgtgcgc
     3841 gccccgtcgc cgagctccgc gccgccgagc tcgagcgtgc ccgtaagcat cgcggactcg
     3901 gcggtcgatt tcgtcgagga gacgatgggc aagagcagct ccacgacgag cctgccgccg
     3961 gacatcatca tcgtcgacga gccgcagccg gtgatcgagg aagtcgtcga gccagggcct
     4021 tccttcgacg cgcgcgcgca cgccaaaaag gccatcgtcg acgccgactc tttcaagcgc
     4081 ctgcgcctgt accccaaggc catcgagacc ctgcacatcg cgctcgaaat cgagccgcgc
     4141 tcgctcgaca ttcgcgcgaa gcttcgcgag ctcttgatcg aatcgggcga tcgcgaaggc
     4201 gcgatcaccg agaccgtgaa tctcgcggcg ctgcacctgg atcgcggcga gcatttcgaa
     4261 gccgaaacgc tcctgcgcga agtgatcgag gtcgagccga cgcacgccgc cgcgctcgcg
     4321 atgctcgagc agctgccgtc gcccatcgcg cccagcgaaa ccacgagcac gaccacggcc
     4381 gctagcccac ccgtgctcga caccttcgat cccgacgcgc cgttgccgtc gtacgatctc
     4441 gaagaggtcg gcgccgacca ggcgctgcat cgcggcacga cgaacacgac gggcccgaag
     4501 ctcctgatcg tcgacgagcc gttcgcgccg gaagaggcgc gagcgctgcc gagctacggc
     4561 caaacgaacg ccgacgctgc gggtttcgac gaagtcgtcg acgaaatcag cgtcatcgaa
     4621 gaggccccgc ccgtccacgt gccgcccgac ctcgaggtgc tcgaggaagc gctcgacgaa
     4681 gccgaattct tcgtcgcgcg cggcctgcac gaggacgcgc gcgcgatctt gcaggatcag
     4741 ctcgcgcgca cgccgaatca ccggctcgtg ctcgagcgct tgcgcgaggt cgaagagtcg
     4801 ctggccgctg cggggtcgag ccagacgatc gaccgcagcc tgctcggcgc cgcggcgagc
     4861 gcgcccgccg tgccggccgc cgacgtagcg gcctcgctcg gcgcgttgga cgacctcgac
     4921 ccccccgaga gcatgcggtc gtcggaggtt acttccagca tggttgacgt cgacgtcgac
     4981 caggtgttcg ccaagttcaa ggccggcgtg cgcgcgcaag tggtcgaagc cgacagcgcg
     5041 acgcactacg acctgggcgt cgcgtacaaa gagatggggc tcgtcaccga agccatcacg
     5101 gagttcgagc aagccgcgcg tgacccacac cgcgaatgca tgtgtttcgc gatgatcggc
     5161 ctgatctacc tcgagcaagg ccagctcgag cgctcggccg aagcgtacgt caaagccctc
     5221 ggcgcccagt cgaagacggt cgagcaggag atgaacctct attacgatct cggcaccgtc
     5281 tacgagatga agggtcagaa gggcgacgcg ctctactact tccaaaagat tgcgcgccgc
     5341 gaccccggtt accgcgacgt ggccgatcgc ttgaatgcgc tcgacccgag tatccaacaa
     5401 gtgaaacccg cgccgactgc gcgcgcggtc aacgacgacg acgatttcga tcgcgcgttc
     5461 aacgacctgt tcgagggcaa gggctcctga gacgaacccg gcgtggacac gacgccgagc
     5521 gaccgtgtta cgctgcgcgg cgggtgatga tgcggcgtcg agcagcattt tgggtcggtg
     5581 ctggggtcgc gctggtggtg ttcgtcgcgt gcggcggacg cgacgggtcg gccccaccgc
     5641 ggacgagtag ggg
//
LOCUS       DATIML010000755         2857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1026574, whole genome shotgun sequence.
ACCESSION   DATIML010000755 DATIML010000000
VERSION     DATIML010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2857
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1026574"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..>2857)
                     /locus_tag="VLJ38_13015"
     CDS             complement(220..>2857)
                     /locus_tag="VLJ38_13015"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HSU40489.1"
                     /translation="SSYKLARRALPAPRDRTPWHALDVRAVLARLGTNATGLDRKEAL
                     ARRRVDHTARSNVVELVEAIGDELFNPLAPLLAAGAGLSAAVGSFGDATMVGGVVALN
                     AVIGGFQRHRTERAIRELARSARRRALVRRGGQLLEIDADQLVRGDVVLLAAGDVVPA
                     DCRIVEAESLEIDASSMTGESMPVKKQAAASFELDVSDRSSMLFEGTAIAAGRVTAVA
                     VAVGDETEARRGALVNKRDAVRGGVERRLRSLIQLTGPVALGAGVSLVAAGLLRGRKL
                     EDLVGSSVSLAVASVPEGLPLLATAAQLAAAERLAKRGALVRNARSIEALGRVDVLCV
                     DKTGTLTEGRIELVEVGDGEVMQNLPELDGATLPVLAAALRASAEPGGRSFDPTEQAL
                     YRASERLDVRPEYACPGFRRAIETSFEAGRGYHATVGNCEAGLVLDVKGAPEVVLRRC
                     TGVRRVGARQPLDAETSAALERHAASLAARGLRVLAVAERIVPQGDSLDPRRLVGLTF
                     LGFLAFSDPVRLSARAAVKELSQAGVRVVMITGDHPGTAEAIAREVGLVGSLHAVTGL
                     ELADIDDEALDRRVRGVSVFARVTPPQKVRIVRALQRAGRVVGMVGDGANDAPAIRLA
                     NVGIAVGEQSTTAARAAADIILTDARLETLVDAVLEGRAMWAAVRDAVSILVGGNLGE
                     IGFTLGAGLIDGRPPLNARQLLLVNLLTDVAPAMAIALRPPPPLSVQNLAHEGPEASL
                     GQLLNRQIAMRAGLTALGASSAWGIARFTGTRVRANTVGLVALVGTQLGQTLMSGRMS
                     RPVVVTGLASAAVLAVIVQTPGLSHAFGCRPLGLIGWSTAIGASTAVTVGSVVVPDLV
                     ARWRGEGAYAPIIVEAERPSLG"
BASE COUNT          453 a         1039 c          977 g          388 t
ORIGIN      
        1 tcttcttcca tggcgaagct ttccgccgtc gcgcgtacgg tgcgctcacc cgcgcactct
       61 acctccgctc tacgaatatg ctcgagcgaa cgacagccaa aatcggcggc ccacgtcacc
      121 cgtacggatg gcccacgtca cccgtacggg tcggcaccgc gagacggcac ccgtgcttgc
      181 ctgttgaaac gttgtcgaaa cccctgtgcg taacgtgcgc tagccaagac tcggtcgctc
      241 ggcttcgacg atgatcggtg cgtaagcgcc ttcgccgcgc cagcgcgcca cgagatccgg
      301 tacgacgaca ctgccgaccg tgacggccgt cgacgcgccg atggccgtac tccatccgat
      361 gaggccgaga ggacgacaac cgaacgcgtg gctgagcccg ggcgtctgca cgatgaccgc
      421 gagcacggcg gccgacgcca gacccgtcac gaccacggga cggctcatgc ggccgctcat
      481 gagcgtctgg ccgagctgcg tcccgaccag ggccacgagg cccacggtgt tcgcgcgtac
      541 gcgagtgccc gtgaagcgcg cgatacccca agccgagctt gcgccgagcg ccgtgagtcc
      601 cgcgcgcatc gcgatttgtc ggttcaagag ctggccgagc gacgcctcgg gaccttcatg
      661 ggcgagattt tggaccgaga gcggcggcgg gggcctgagc gcaatcgcca tggccggcgc
      721 cacgtcggtg aggagattca cgagcaggag ctggcgagcg ttgagcggcg gccgcccgtc
      781 gatgagaccg gcgccgaggg tgaagcctat ttcgcccagg ttaccgccga ccagaatcga
      841 aacggcgtca cgtacggccg cccacatcgc gcgaccctcg agcacggcgt ccacgagagt
      901 ctcgagccgc gcgtccgtga gaatgatgtc cgcggccgcg cgcgccgccg tcgtactctg
      961 ctcgccgacc gcgataccga cgttggcgag acggatggcg ggcgcatcgt tcgcgccgtc
     1021 gcccaccatc cccacgacgc gccccgcgcg ctgcaaggcg cgcacgatgc gcaccttttg
     1081 cggcggcgtc acgcgcgcga acacgctcac gccgcgcacg cggcggtcga gcgcctcgtc
     1141 gtcgatgtcg gcgagctcga gaccggtgac cgcgtggagc gagcccacga gcccgacctc
     1201 acgggcaatc gcctcggccg ttcccgggtg gtcgcccgtg atcatcacga cgcgcacccc
     1261 ggcttgcgag agctccttga cggcggcgcg ggcgctcagg cgcaccggat cactgaacgc
     1321 gaggaagccg aggaacgtga gccccacgag ccgccgcgga tcgaggctat cgccttgggg
     1381 aacgatacgt tccgccacgg ccagcacgcg cagtccgcgt gccgcgagcg atgcggcgtg
     1441 cctttcgagc gcggcgctcg tttcggcatc gagcggctgg cgcgccccga cgcgccgcac
     1501 acccgtgcag cggcgcagca cgacctcggg tgcgcccttc acgtcgagca cgagcccggc
     1561 ctcacagttg ccgaccgtcg cgtggtagcc gcgcccggcc tcgaacgagg tctcgatcgc
     1621 gcgccggaaa ccgggacacg cgtactcggg acgcacgtcg agccgctcgc tcgcgcggta
     1681 gagcgcctgc tcggtcggat cgaacgagcg cccgccgggc tcggccgatg cacgcaaggc
     1741 tgcggcgagg acgggcagcg tcgcaccgtc gagctcgggt agattttgca tcacctcgcc
     1801 gtctcccacc tcgacgagct ctatgcggcc ctcggtgagc gtgcctgtct tgtccacgca
     1861 cagcacatcg acgcgaccga gcgcttcgat actgcgcgcg ttgcgcacga gggcgccgcg
     1921 cttggcgaga cgctccgcgg ccgcgagctg ggccgccgtc gcgagcagcg gcaagccttc
     1981 gggcaccgac gccacggcga ggctcacgct gctgcccacc aaatcctcga gcttccggcc
     2041 gcgcaatagg ccagcagcca cgagtgaaac gccggcgccg agcgcgacgg gcccggtgag
     2101 ttgaatcaag gagcgcagcc gccgctcgac gccgccgcgc accgcgtcgc gcttgttcac
     2161 gagcgcgccg cggcgtgctt cggtttcgtc gccgaccgcc acggcgacgg ccgtgacgcg
     2221 cccggccgcg atggccgtcc cttcgaacag catcgagctc cgatccgaca cgtcgagctc
     2281 gaacgaagcc gctgcttgct tcttcacggg catcgactca ccggtcatgc tcgaagcgtc
     2341 gatttcgagc gactcggcct cgacgatgcg acaatcggcc gggacgacgt cgccggccgc
     2401 caacaggacc acgtcaccac gcacgagctg atcggcgtcg atttcgagca gctggccacc
     2461 acggcgcacg agcgcacgtc ggcgcgccga acgcgcgagc tcgcggatag cgcgctcggt
     2521 gcgatgccgc tggaagccgc cgatgactgc gttcagcgcg acgacgccgc cgaccatcgt
     2581 cgcgtcgccg aacgagccga ctgccgcgga cagacccgcg ccggcggcga gcagcggcgc
     2641 gagcggattg aagagttcgt ccccgatggc ttcgacgagc tcgacgacgt tcgaacgcgc
     2701 cgtgtgatcg acgcgtcggc gagcgagcgc ttctttgcgg tctaggcccg tcgcgttggt
     2761 accgaggcgc gcgaggacgg cgcgcacgtc gagcgcgtgc cacggcgtgc gatcgcgcgg
     2821 cgccggcagc gctcggcgcg cgagcttgta cgaggaa
//
LOCUS       DATIML010000756         2777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4201000, whole genome shotgun sequence.
ACCESSION   DATIML010000756 DATIML010000000
VERSION     DATIML010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4201000"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="VLJ38_13020"
     CDS             <1..420
                     /locus_tag="VLJ38_13020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40490.1"
                     /translation="GGSSGGTGGSSGGTGGSAGQLQCDADQDGARSDAATCGGDDCND
                     GDANVYPTQAGFFTSKNKSGTFDYNCDGDEEREFTTTLDCSLLNLVDCSGEGFDASLP
                     ACGQSGNFIRCDAISVLPTLSLSCAPVSEGTRVMGCR"
     gene            complement(425..1678)
                     /locus_tag="VLJ38_13025"
     CDS             complement(425..1678)
                     /locus_tag="VLJ38_13025"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HSU40491.1"
                     /translation="MAAPKKKPPYVVRPPTAVLTRGFDPRLSVGSARPAVFRSSTYVF
                     STPEAAERAFSIALGRSRPSQAENVDLIYSRLSHPNAEIVEDQVVPLERGAEEAAVFN
                     SGMAAISTIFLTTCPPGSSFVYTTPVYGGTQHLIHQLLEPLGLRGVPVPAAATAELER
                     AIETTQHLKLVFLETPANPTLVMCDIGAAVRAAKRNATGTPLVVVDNTFLGPIFQHPL
                     ALGADLSVYSATKYLAGHSDMLGGVVLGKDLELIASLRGMRAILGNILQPDECWLLNS
                     RLPTVELRMTRQSKNAQRIVEALSGHPRIARLHYPALFSDPEQIRIRDAQSDFSGAVF
                     ALELEGGKRAAFDFLRRLTIAKNAVSLGGVETLACHPATTTHSEMSPEELASAGITDA
                     LVRISVGIEDRRDLLTEFQGALDAL"
     gene            1744..2583
                     /locus_tag="VLJ38_13030"
     CDS             1744..2583
                     /locus_tag="VLJ38_13030"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HSU40492.1"
                     /translation="MVDLSVTPGLALTLEGAVEPHFVDAMGHMNVAFYAQLFDRAVWR
                     RFGELGLDAAYLERERRGMFALEENTRYIVELREGERLSVHTALVEVREKTLRFVQFL
                     ENRDKQELAATQEIVVAHIDLTTRRTTPIPPELRARLAAAVVGSLPGSTMTEAAAQAF
                     AQSWIDAWNRRDVEAVLAHYADDATFVSPRAERITGSPVVEGKSALRAYWQAALQQHQ
                     LEFALDRALWSARAETLTVLYRAVFNEQPPNRASEVMRFRGSSIVHGEAFYGGTAEPS
                     VRA"
     gene            2580..>2777
                     /locus_tag="VLJ38_13035"
     CDS             2580..>2777
                     /locus_tag="VLJ38_13035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40493.1"
                     /translation="MKRSSSTRVRSAEAPPAELRLSGWGDNEPLALLYFGFRAVVKKP
                     DEELARHGLGRVHHRILFFIAR"
BASE COUNT          476 a          905 c          947 g          449 t
ORIGIN      
        1 ggcggctcga gcggcggcac tggcggctcg agcggcggca ctggcggttc cgctggccag
       61 ctccaatgcg acgcggatca agacggcgcg cgctcggacg ctgctacctg cggcggcgac
      121 gactgcaacg acggcgatgc caacgtgtat ccgacccagg ccggcttctt cacgtcgaaa
      181 aacaaatccg gcacattcga ttacaactgc gacggggacg aggaacgaga gtttacgacg
      241 acgctcgatt gctcgctgct caatctcgtc gactgttccg gcgagggctt cgacgcttct
      301 ctacccgcct gcggacagtc cggcaatttc attcgctgcg acgcgatctc cgtcctcccg
      361 acgctgtcac tgtcgtgcgc gcccgtgagt gaaggcacgc gtgtcatggg ttgccgctga
      421 cttgtcacaa cgcgtcgagc gcgccctgga attccgtcag tagatcccgg cgatcttcga
      481 tcccgacgga aatgcgcacg agcgcgtcgg tgatgcccgc gcttgcgagc tcctcgggcg
      541 acatctcgga gtgtgtcgtc gtcgccggat ggcaggcgag ggtttcgacg ccgccgaggc
      601 tcacggcgtt tttggcgatc gtgagccggc gcaagaaatc gaaggcggcg cgtttaccgc
      661 cctcgagctc gagcgcgaac accgcgcccg agaaatcaga ctgcgcgtca cggatgcgga
      721 tctgctccgg atcggaaaaa agcgccgggt agtggaggcg agcgatgcgc ggatgcccgg
      781 acagcgcctc cacgatgcgc tgggcgttct tgctctgacg cgtcatgcgg agctcgaccg
      841 tcggcagtcg gctgttcaag agccagcact cgtcgggctg caggatattg ccgagaatcg
      901 cgcgcatgcc gcgcaagctc gcgatgagct cgaggtcctt gccgagcacc acgccgccca
      961 acatgtcgct gtggccggcc aagtacttgg tcgcggaata gacgctgagg tcggcgccga
     1021 gcgcgagcgg atgctggaaa atggggccga ggaaggtgtt atcgacgacg acgagtggcg
     1081 tgccggtggc gttccgcttg gccgcgcgta cggccgcgcc gatgtcgcac atgacgagcg
     1141 tcggattcgc gggggtttcg aggaagacga gcttcaggtg ctgcgtcgtc tcgatcgcgc
     1201 gctcgagctc ggccgtcgcc gcggcgggca cgggaacgcc gcgcaggccg agcggctcga
     1261 gcaattgatg gatcaggtgc tgggtcccgc cgtaaaccgg cgtcgtgtag acgaagctcg
     1321 agccgggcgg acacgtcgtc aaaaatatcg tcgaaatcgc cgccatgcca gagttgaaga
     1381 cggcggcttc ttcggcgccg cgctcgagcg gcacgacctg gtcttcgacg atctcggcgt
     1441 tcgggtgcga aagccgggag tagatgaggt cgacgttctc ggcctgcgac ggacgcgagc
     1501 ggccgagcgc gatcgagaac gcgcgctcgg cggcctcggg cgtcgagaac acgtaagtcg
     1561 aggagcgaaa caccgcgggc cgcgccgagc cgaccgagag ccgcgggtcg aacccgcgcg
     1621 tgagcacggc cgtgggcggc cggacgacgt agggcggctt cttcttgggt gcggccatgt
     1681 ttccaaggct acccggaacc gggggcattg accaccagca gccgcgacgc tagagaggtc
     1741 aacatggttg acctatccgt cacgccgggt ctcgcgctca cgctcgaagg cgccgtcgag
     1801 ccgcatttcg tcgatgcgat gggccatatg aacgtcgcgt tttacgcgca gcttttcgat
     1861 cgcgccgtct ggcgtcgctt cggcgagctc ggcctcgacg ccgcctacct cgagcgcgaa
     1921 cgccgcggca tgttcgcgct cgaggaaaac acccgctata tcgtcgagct cagggaaggc
     1981 gagcggctca gcgtccacac ggccctcgtc gaggtgcgag aaaagacgct gcgcttcgtg
     2041 cagttcctcg aaaaccgcga caagcaagag ctcgcggcga cgcaagaaat cgtcgtcgcg
     2101 cacatcgacc tcacgacgcg gcgcacgacg ccaatccccc ccgagctccg tgcgcgcctc
     2161 gcggcagcgg tcgtcggctc gctgcccggc tcgaccatga ccgaagccgc cgcgcaagcg
     2221 ttcgcgcaga gctggatcga cgcctggaat cgacgcgacg tcgaagccgt gctcgcgcac
     2281 tacgccgacg acgccacgtt cgtgagtccg cgcgccgagc gcatcacggg cagccccgtg
     2341 gtggaaggca agagcgccct gcgcgcctat tggcaagctg cgctccagca gcatcagctc
     2401 gaatttgcgc tcgaccgtgc gctgtggtca gcgcgcgccg agacgctaac cgtgttgtac
     2461 cgcgccgtct tcaacgagca gccgccgaac cgcgcttcgg aggtcatgcg cttccgtggc
     2521 tcgagcatcg tgcatggcga agcattttac ggcggcacgg ccgagcccag cgtgcgggca
     2581 tgaagcgttc gagctcgacg cgggttcgca gcgccgaagc gccgcccgca gaacttcggc
     2641 tgagcggctg gggcgacaac gagccgctcg cgctgcttta tttcggcttc cgcgccgtcg
     2701 tgaaaaagcc cgacgaagag ctcgctcgcc acgggctcgg gcgggttcac caccgcatcc
     2761 tgtttttcat cgcgcgt
//
LOCUS       DATIML010000757         2047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3910533, whole genome shotgun sequence.
ACCESSION   DATIML010000757 DATIML010000000
VERSION     DATIML010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3910533"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            29..1105
                     /locus_tag="VLJ38_13040"
     CDS             29..1105
                     /locus_tag="VLJ38_13040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40494.1"
                     /translation="MTLVPAPFVLLALATVVAFAPAAARAQAGNDLSGLSAEALFAEG
                     RRLMADGRTEQACDKFRESERLDPAVGTLLNLARCEKALGRSASAWLDYREAASRAHA
                     AGETKRERVARAEADALSALLPHLHVTVPGAAKLDGLELTLDATACPSSLWNSSLPLD
                     PGTHTLAARAPGFEPWTTSVELAPGEEREAVVPILERRSEPPPSSPPSEPAHLGPAIP
                     VERATSTSPTARSEPLEPTAQRRADPLKLTGYVVGGLGAALLVTGGGFALRAKRLDAS
                     SRENDHCDGATGCDADGLDKNRDALHAANLATGFAVTGAVLLAAGVVLVLVPRRTATT
                     KAARSGALAVQAELGSVSGLRASW"
     gene            1130..>2047
                     /locus_tag="VLJ38_13045"
     CDS             1130..>2047
                     /locus_tag="VLJ38_13045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40495.1"
                     /translation="MRSRRGALIGLGIIGLACSSVLGIDRYGPRAASVRRCDAAVTTA
                     CPPDEEGSAQTCFRAQTLGGHDFCVAVCDPTQAPANPEEFSCLGTGALLRICDPDVPH
                     SCPDGLSCFRTEVARVNGLLYPKQPSGLCIDMPVCTEAADCAGEPIRSECGSEVVRST
                     YPSLAGALVLNDLQCVEPCEGSELTCASGEECLDSELFSALPSICVPACEDAPCPPNF
                     YCLAHSGSGYPPLCVPGIPGGRCTNPEDCLLGYCVDTEAGFNLCSIDCDSDAVCQLLA
                     DIDPGFMCLMGHCVTKASYAGENCQDVSQC"
BASE COUNT          298 a          720 c          700 g          329 t
ORIGIN      
        1 atcccgaatc gatctatctt gaccggaaat gaccctggta cccgccccgt tcgtgctgct
       61 ggcgctcgcc acggtcgtgg cattcgcgcc tgcggccgcc cgggcgcagg ccgggaatga
      121 cttgtcggga ctctccgcgg aggctctgtt cgctgaagga cggcgtctga tggcagacgg
      181 ccggacagag caggcgtgcg acaagtttcg cgagagcgaa cggctcgatc cagccgtcgg
      241 cacgctgttg aaccttgcgc gctgtgaaaa ggcgcttggc cgcagcgcga gcgcctggct
      301 cgactaccgc gaggctgcct cacgcgcgca tgccgcgggc gagacgaagc gcgaacgcgt
      361 cgcgcgcgcg gaggccgatg cgctgtccgc cctgctaccg cacctgcacg tgaccgtgcc
      421 gggggccgca aagctcgacg gcctcgagct cacgctcgac gccaccgcgt gcccgagctc
      481 gctctggaac agttcgctgc cgctcgaccc ggggacgcac acgctcgcgg ctcgagcgcc
      541 gggcttcgag ccgtggacca cgagcgtgga gctcgctccc ggcgaggagc gcgaggccgt
      601 cgttcccatc ctcgaaagac gctcggaacc gccgccgagc tccccgccaa gcgagccggc
      661 acacctcggc cccgccattc cggtcgagcg agcgacgagc acgagcccga cggcgcgctc
      721 ggagccgctg gaaccgacgg cccagcgtcg cgccgatccc ctgaagctca ccggttacgt
      781 cgtgggcggc ctcggggcag cgttgctcgt gacgggcggc gggttcgcgc ttcgcgcaaa
      841 gcggctcgat gcgagctcac gcgagaacga ccattgcgac ggcgcgaccg ggtgcgacgc
      901 cgatggcttg gacaagaatc gcgatgcgct gcacgccgcg aacctcgcga ccgggtttgc
      961 ggtgactgga gccgtgttgc tcgctgccgg ggtcgtgctc gtcctcgtcc cgcgccgcac
     1021 cgccacgacg aaagcggcgc gctcgggcgc gctcgccgtg caggcggagc tcgggagcgt
     1081 gtccgggctt cgcgccagct ggtgaatggt gtcggcagac cgatccgcga tgcgctcgag
     1141 acgtggcgcg ctcatcgggc tcggcatcat cggcctcgcc tgtagcagcg tgctcggcat
     1201 cgaccgctac gggccgcgcg ctgcttccgt gaggcgctgc gatgccgccg tcaccaccgc
     1261 ctgtccgccc gacgaggagg gcagcgccca aacctgcttt cgagcgcaaa cgctcggcgg
     1321 ccacgacttc tgcgtcgccg tgtgtgatcc gacgcaagcg cccgcgaacc ccgaggagtt
     1381 cagctgcctc ggcaccggtg ccctcctgcg catctgcgat ccggacgtgc ctcattcctg
     1441 cccggacggg ctgtcctgct tccgaacgga agtcgcgcgc gtcaacggcc tgctctaccc
     1501 caagcagccg agcgggcttt gtatcgacat gccggtgtgt accgaagctg ccgactgcgc
     1561 cggcgagccg atccgcagcg agtgcggcag tgaagtggtg cgttcgactt acccgagtct
     1621 cgcgggcgcg ctcgtgctga acgatttgca atgcgtggag ccgtgcgagg gctccgagct
     1681 cacgtgcgcc tccggcgaag agtgtctgga ttcagagctg ttctcggcac tcccgtcgat
     1741 ctgcgtgccc gcgtgcgagg acgcgccgtg tccgccgaac ttctactgcc tggcgcactc
     1801 ggggtccggc tatccgccgc tctgcgtccc cggcattccg ggcggccgct gcacgaaccc
     1861 ggaagattgc ttgctcggct actgcgtcga cacggaggcg ggcttcaact tgtgcagcat
     1921 cgactgtgac tcggacgccg tctgccagtt actcgcggac atcgatccgg gcttcatgtg
     1981 tctcatgggg cactgcgtca ccaaagcctc ctatgcggga gagaattgcc aggacgtgtc
     2041 gcaatgc
//
LOCUS       DATIML010000758         2753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1896148, whole genome shotgun sequence.
ACCESSION   DATIML010000758 DATIML010000000
VERSION     DATIML010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896148"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..908)
                     /locus_tag="VLJ38_13050"
     CDS             complement(<1..908)
                     /locus_tag="VLJ38_13050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HSU40496.1"
                     /translation="MSRARATALALVNWKGVFFERYLLDPHVTALEGANGAGKTTVMI
                     AAYLVLLPDLTKLRFTNLGETAATGGDRGIFGRLGAPGRPSYAALELELAGERVILGV
                     HLERKAEPSVQATTFMVHGLARAHGLSALFLLADAENERVPELAELKARAAELGARIE
                     VFDTLRDYFGALFERGIVPLRLANDDDRAKFNEMLRTSMTGGISRALTSELRTFVLKE
                     ESGLSDTLARMRANLDACRRTRAEVQEARALEREISGVYEAGSGMFRAALGALGAELH
                     EATRRRDAARAEEHEAKLTLARAETAL"
     gene            complement(905..1906)
                     /locus_tag="VLJ38_13055"
     CDS             complement(905..1906)
                     /locus_tag="VLJ38_13055"
                     /inference="COORDINATES: protein motif:HMM:NF016198.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HSU40497.1"
                     /translation="MTATKFLTLGDAVQDEHFPDVDSALRRGRHIDRDDTSWFGFLAD
                     AADMLEPFYRRFGAELVYRADGYYYLLPTGDRLAKRYLSVAEMLVGQALTLLYLDPAT
                     VEQGGRVRRDQVLGHLATVMGTDALVRALNPKRRRYDERVAQETVRTRVADALRRLGA
                     LGFVEALGAEELKLRPALLRFAEPVRASADSTAALSKLVASGELALMPLDAVPEAGEG
                     EFEEETAPFGVAHGGDDVETERAETYGDASPRAETDGDVNERAETHPGAPEADAPNAD
                     TPDADAADTPDADAPDGELSEVLRGFDPSEFDDFDFEDVKRDPPAELPDDTALEEPE"
     gene            complement(1903..>2753)
                     /locus_tag="VLJ38_13060"
     CDS             complement(1903..>2753)
                     /locus_tag="VLJ38_13060"
                     /inference="COORDINATES: protein motif:HMM:NF028501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="condensin subunit MukF"
                     /protein_id="HSU40498.1"
                     /translation="VAGPLRVTIRDLVDGIERRQRGLDLQQERFQQEIGQLLSADWFD
                     AVARCQDLLESTTSTLRELNDVLLRDAHGLVTLLEDIRELAEERGAQGANEACHRLSE
                     QLDRIGAWGSARQQAWSEYYQYVHRYLRDVVRLDPTRALTERLRAQLSGRAGRSFALV
                     VAAQPPLVVPRDVTVPNERPPLARPRSERERPLVEAAPDDREQALTADVQAALDDGAR
                     TLSAVPQAVVERLPEAERFSSAGRVAEVVTRLTDAESARERPWQRVEEGIWIEEWALG
                     RGPERT"
BASE COUNT          395 a         1021 c          916 g          421 t
ORIGIN      
        1 agcgccgtct cggcgcgcgc gagggtcaac ttcgcttcat gctcctcggc tctggcggcg
       61 tcgcgcctgc gcgtcgcttc gtggagttcg gcgccgagcg ccccgagcgc cgcgcggaac
      121 ataccgctgc ccgcctcgta cacgccgctg atctcgcgct cgagcgcgcg cgcttcctgc
      181 acctcggcgc gcgtgcgccg gcaagcgtcg agattagcgc gcatgcgcgc gagcgtgtcc
      241 gagagccccg actcttcctt gagcacgaag gtgcgaagct cgctcgtgag cgcgcgcgag
      301 atgccgcccg tcatgctcgt gcgcagcatc tcgttgaatt tcgcgcgatc gtcgtcgttc
      361 gcgagacgca gcggcacgat gccgcgctcg aacagcgcgc cgaagtaatc gcgcagcgtg
      421 tcgaacacct cgatacgcgc gccgagctcg gccgcgcgag ccttgagctc cgcgagctcc
      481 ggcacccgtt cgttctcggc gtcggcgagc agaaatagcg cagaaaggcc gtgcgcgcgc
      541 gcgaggccgt gcaccatgaa ggtcgtcgct tgcacgctcg gctccgcctt acgctcgagg
      601 tgcacgccga ggatcacgcg ctcgccggcg agctcgagct cgagcgccgc gtacgacgga
      661 cgtccgggcg cgccgagtcg cccgaaaatt ccgcgatcgc cgcccgtcgc ggcggtttca
      721 ccgaggttcg tgaagcgcag cttcgtgaga tccggcaaca gcacgaggta cgccgcgatc
      781 atcacggtcg tcttgcccgc gccgttcgcg ccctcgagcg ccgtcacgtg cggatcgagc
      841 aagtaacgct cgaagaacac gcctttccaa ttcaccaaag cgagcgccgt ggctcgcgcg
      901 cgactcattc aggctcctcg agcgccgtgt cgtcgggcaa ctcggcgggc gggtcgcgct
      961 tcacgtcctc gaagtcgaag tcgtcgaact cgctcggatc gaaaccgcgg agcacttccg
     1021 agagctcgcc gtcgggtgcg tcggcgtcgg gtgtgtcggc tgcgtcggcg tcgggtgtgt
     1081 cggcgttcgg ggcgtcggct tccggcgcgc cagggtgcgt ctccgcacgc tcgttcacgt
     1141 cgccgtccgt ctccgcacgc ggcgacgcgt cgccgtacgt ctccgccctc tccgtctcca
     1201 cgtcgtcgcc accgtgcgcc acgccgaacg gcgccgtttc ctcctcgaac tccccctcgc
     1261 cggcttcggg cacggcgtcg agcggcatga gcgcgagctc tccgctcgcg acgagcttgg
     1321 acaacgcagc cgtcgaatcc gcggacgcgc gcaccggctc cgcaaaccgc agcaaagcgg
     1381 gccgcagctt cagctcctcg gcgccgagcg cctccacgaa cccgagcgca ccgaggcgcc
     1441 ggagcgcgtc cgccacacgc gtgcgcaccg tttcctgcgc gacgcgctcg tcgtagcggc
     1501 gccgcttggg attgagggcg cgcacgagcg cgtccgtgcc catcaccgtc gcgagatgcc
     1561 cgagcacttg gtcgcgccgc acgcggccgc cttgttcgac ggtcgccgga tcgaggtaga
     1621 gcagcgtgag ggcttgcccc acgagcatct ccgcgacgct caggtagcgc ttcgcgagcc
     1681 gatcgcccgt cggcaaaagg taatagtagc cgtcggcccg atacacgagc tcggcgccga
     1741 agcggcgata aaatggctcg agcatgtcgg cggcgtcggc gagaaagccg aaccacgacg
     1801 tatcgtcgcg atcgatgtgc cggccgcgcc gcagcgccga gtccacgtcg ggaaaatgct
     1861 cgtcttgtac cgcgtcgccg agcgtcagga atttcgtcgc cgtcatgttc gctccgggcc
     1921 gcgtccgagc gcccattcct cgatccaaat cccctcttcc acgcgctgcc acggccgttc
     1981 gcgcgcgctc tcggcgtcgg taagccgcgt cacgacctcg gcgacgcgac ccgcgctcga
     2041 gaagcgttcg gcttcgggca agcgctcgac cacggcttgc ggcacggccg aaagggtacg
     2101 cgcgccgtcg tcgagcgcgg cttggacatc ggcggtgagc gcctgctcgc gatcgtcggg
     2161 tgccgcttcc acgagcggcc gctcgcgctc gctgcgcggc cgcgcgagcg gcgggcgctc
     2221 gttcggcacc gtcacgtcac gcggcacgac gagcggcggc tgcgccgcca ccacgagcgc
     2281 gaacgagcgc cccgcgcgcc cgctcagctg cgcgcgcagc cgctccgtga gcgcgcgcgt
     2341 gggatcgagc cgcacgacgt cgcgcaggta gcggtgcacg tattggtagt attcggacca
     2401 cgcctgttgc cgcgccgaac cccaggcacc gatgcgatcg agctgctcgg acaagcggtg
     2461 acacgcctcg ttcgcgccct gcgcgccgcg ctcctcggcg agctcgcgaa tgtcctcgag
     2521 caacgtcacg aggccgtgcg cgtcgcgcag cagcacgtcg ttcagctcgc gcagcgtgct
     2581 cgtggtcgac tcgagcaaat cctgacagcg cgccacggcg tcgaaccaat ccgcgctgag
     2641 cagctgcccg atttcctgct gaaaacgctc ctgctgcaga tcgagcccgc gctgccgccg
     2701 ctcgatcccg tccaccaaat ctcgaatcgt gacgcgcagc ggccccgcga cgc
//
LOCUS       DATIML010000759         2307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4201371, whole genome shotgun sequence.
ACCESSION   DATIML010000759 DATIML010000000
VERSION     DATIML010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4201371"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..836)
                     /gene="phoU"
                     /locus_tag="VLJ38_13065"
     CDS             complement(168..836)
                     /gene="phoU"
                     /locus_tag="VLJ38_13065"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HSU40499.1"
                     /translation="MDRRHTDREYEGELESLREQVLLMGARVEEMMTLALRAFSEQNT
                     RLARTTIAHDRLVDAAEMQIDELCLRVLALRQPVASDLRFITTTLKLVTDLERIADLC
                     VNLCERVAEFGDEPSFAVDGMISQVGGLAQSMVHDALDAFVGRDALKAEQVMDRDETV
                     DRLHAEIIPELVNLMTTEPAVVPRSIRLISIAKYLERIADHATNIAEMVVFMVRGQDV
                     RHMS"
     gene            985..>2307
                     /locus_tag="VLJ38_13070"
     CDS             985..>2307
                     /locus_tag="VLJ38_13070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40500.1"
                     /translation="MLAGPLERSAAWWRRLWDDPLRALGFTTALVAVGLLAGALVYVL
                     APMLADFSTYGFHDWDSQTAYRYITTFSLKQGEAPWWHPWLCGGVPAFGYPEGATNFI
                     SPYLPFYVFADIRTAIRVEVLGQGLLGLAGTYAFASLLTTSVALRTLLAALFVLNGRW
                     ALQAAVGHTWHLQYAFMPWAFYFFERSLAPGRWRFAFGAGAALALCCYLGGVYPLPHT
                     ALLLSLYALLRAAFERTPTPLRSLVVAALSAVGFSAPKLFAVADQMRVIPRLIESKEV
                     IGFSELLAMLVAPDQRYGVRAVPVPAYNWHEWGIYVGLGGLLVLFIAAVFAAGPRGQS
                     FKLLGLLCLFLGFGAFHPYAPWTLLHELPLFSSQHVPSRFHYPMLLMLGAAFVVYANE
                     HLAPRLARRPWLDLLLLVPVALVAWDMARFSRTPFTQAFWMTAPSEIAR"
BASE COUNT          310 a          801 c          739 g          457 t
ORIGIN      
        1 ggcggtcact cgcgaccgag gcgctggaac tcttcgattt cgtcgtcgag acgttgaaga
       61 aacgcctgta atgagcgccg cacgccgtga cgcgccgcac gccgtaacgc gccgcacgcc
      121 gtaacgcgcc gcacgccgta acgcgccgca cgccgtaacg cagagcctca gctcatgtga
      181 cgcacgtctt gcccgcgcac catgaacacc accatttcgg cgatgttcgt ggcgtgatcg
      241 gcgatgcgct cgaggtactt tgcgatcgag atcagccgaa tcgagcgcgg cacgaccgcg
      301 ggctccgtcg tcatcaggtt cacgagctcg gggatgatct cggcgtgcaa gcggtccacg
      361 gtttcgtcgc gatccatcac ctgttcggcc ttgagcgcgt cgcggcctac gaacgcgtcg
      421 agcgcgtcgt gcaccatgct ttgcgcgagc ccgccgacct ggctgatcat gccgtccacc
      481 gcgaacgacg gctcgtcgcc gaactccgct acgcgctcgc acagattcac gcacaagtcg
      541 gcgatgcgct cgagatccgt gacgagcttc agcgtcgtcg tgatgaagcg cagatcggac
      601 gcaaccggct ggcgcaaagc gagcacgcgc aggcaaagct cgtcgatctg catttctgcc
      661 gcgtcgacca gacgatcgtg cgcgatggtc gtgcgcgcga gccgcgtgtt ctgctcgctg
      721 aaggcccgca gcgcaagcgt catcatctcc tcgacgcgtg cccccatgag gagcacctgc
      781 tcgcggagcg attcgagctc accctcgtac tcgcgatcgg tgtgtcggcg gtccatcacc
      841 tacttccccg acgctacctc agacgctcgg cgagcgcact ctccggcctt gtttcagagc
      901 gcttcgtgac gcccgcgtgg cgtgagctgt cgcgttcgcg atctgggctc ctaaaactgc
      961 ttcggtcgcg actaaagtag cgccgtgctt gccggaccgc tcgaacgctc ggccgcgtgg
     1021 tggcggcgcc tgtgggacga cccgctccgc gcactcgggt tcacgacggc gctcgtcgcc
     1081 gtcgggctgc tcgccggagc gctcgtgtac gtgctcgcgc cgatgctcgc ggacttttcg
     1141 acttacggat ttcacgactg ggattcgcaa acggcatatc gttacatcac gacgttcagc
     1201 ctgaagcagg gtgaggcgcc gtggtggcac ccatggctct gcggcggtgt gcccgcgttc
     1261 ggctatcccg agggggcgac gaatttcatc tcgccgtacc tccccttcta cgtcttcgcc
     1321 gacatacgca cggcgattcg cgtcgaggtg ctcggccagg ggctgctcgg gctcgccggc
     1381 acttacgcgt tcgcgagttt gctcacgacg agcgtcgcgc tccggacgct actcgcggcg
     1441 ttattcgtgc tgaacggccg gtgggcgctg caggccgccg tcggccacac ctggcacctg
     1501 cagtacgcgt tcatgccgtg ggcgttctac ttcttcgagc gctcgctcgc gccgggtcgc
     1561 tggcgtttcg ctttcggcgc gggcgcggcg ctcgcgctct gctgctatct cggcggcgtg
     1621 tacccgctgc cgcacacggc gctgctcttg agcctgtacg cgctcttgcg ggcggcgttc
     1681 gagcgcacgc ccacgccact tcggagcctc gtggtcgctg cgctttcggc ggttgggttc
     1741 tcggcgccca agctcttcgc ggtggcggat cagatgcgcg tgatcccgcg gctcatcgag
     1801 tccaaggaag tgatcggctt ctccgagctc ttggcgatgc tcgtggcgcc cgatcaacgt
     1861 tacggcgtcc gcgccgtccc cgtgccggct tataactggc acgagtgggg gatttacgtg
     1921 gggctcggcg ggctgctcgt gctcttcatc gcggccgtgt tcgccgcggg cccgcgcggg
     1981 cagagcttca aattgctcgg gctactctgc ctatttctgg ggttcggcgc gttccacccg
     2041 tacgcgccgt ggacgctctt acacgagctg ccgctcttct cctcgcagca cgtcccgtcg
     2101 cgctttcact acccgatgct cctgatgctc ggcgcggcgt tcgtcgtgta cgcgaacgaa
     2161 cacctcgcgc cacggctcgc tcgccggccc tggctcgatc tgttgctgct cgtccccgtc
     2221 gcgctcgtgg cctgggacat ggcgcgcttc tcgcgcacgc ccttcacgca ggcgttttgg
     2281 atgacggcgc cgtcagagat cgcgcgc
//
LOCUS       DATIML010000760         2855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3626415, whole genome shotgun sequence.
ACCESSION   DATIML010000760 DATIML010000000
VERSION     DATIML010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3626415"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..726
                     /locus_tag="VLJ38_13075"
     CDS             184..726
                     /locus_tag="VLJ38_13075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40501.1"
                     /translation="MASADAAPSGSAAPSGGAAPSGAFGAQGLPVGVRHLPKAFTRAL
                     SIADRSDPRWLTLAPGPAGEARVEIGVSDDGTLGELAYQNADERDRLAPVVRHLLENT
                     RLLLESGRFSVDPTTLRAGVQRLRVRVEVVERAGSSDPDGDPNELKELEYEAPTATKP
                     GRGSFALNSGRRVIGWVYVE"
     gene            773..1702
                     /locus_tag="VLJ38_13080"
     CDS             773..1702
                     /locus_tag="VLJ38_13080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40502.1"
                     /translation="MEPLSDAAIRPLVERYAELVSALELPAGEPLLVLPNGEFFPDVY
                     SGDVASVERLAARMQGYAGLESVNIDFGVSGEMFGSEGGCGTGGCGSGACATPSVEIS
                     EPRLRRTEQGYAVRVPAVELGDPIVLTARIATALGAIALLERHADGETRVRDAAAAEL
                     AAVTLGFGVLLLEASYLYKKSCGGPHVTHATELGCAELAVVFALSAAREKHSLRAALA
                     ELGTTQRVVVKDAAALVGESPALVRSLREHPLRVARGDFALRDGRSWLSRLFGGRSRP
                     KSEEERMTAALAALERGASVDELAELVGSQDGE"
     gene            2436..>2855
                     /locus_tag="VLJ38_13085"
     CDS             2436..>2855
                     /locus_tag="VLJ38_13085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40503.1"
                     /translation="MDGAKKLTTGGMSVMSGLPTSTKLTLMSGGMSHEYIIDIPADYD
                     PTHPYRLIFSWHQAYGSDTGNANGLHPANDGPNFDAKNYAYFGLHREMTAANDTAIFI
                     APGGIGNLPWDYNRDVVLFDDLLALVDTNLCIDDSRVF"
BASE COUNT          455 a          941 c         1030 g          429 t
ORIGIN      
        1 gagtcgggtc cggtcacgac gcctgacgag agcaccgcga gggcgccgca accggtcacg
       61 gcgacacacg ccgcgcaagc aagccgcatg gccgtggcga cgcacgctgt cgctacgtca
      121 cgagcgacgc cagcgaagtc agccacgaag ctcacctctg ccgcgacgaa gctccccgcc
      181 gcagtggcga gcgccgacgc agcaccgagc ggcagcgctg cgccgagcgg cggcgctgca
      241 ccgagcggcg ccttcggtgc gcaaggtttg cccgtcggcg ttcggcacct gccgaaagcg
      301 ttcacgcggg cactcagcat cgccgatcgc agcgatccgc gttggctcac gctggcgccc
      361 ggcccggccg gcgaagcacg cgtcgaaatc ggcgtctcgg acgacggcac gctcggtgag
      421 ctcgcgtacc agaatgccga tgaacgtgac cggctcgcgc ccgtcgtgcg ccatttgctc
      481 gaaaatacgc gtctcctgct cgagagcggc cgcttctccg tcgacccgac gacgctgcgt
      541 gccggcgtgc aacgtttgcg cgtccgcgtc gaagtcgtcg agcgcgccgg aagcagcgat
      601 ccggacggcg atcccaacga gctcaaggaa ctcgagtacg aagcgcccac ggccacgaag
      661 ccgggccgcg gaagcttcgc actgaactcg ggccgccgcg tgatcggctg ggtctacgtc
      721 gaatgagcgc cacgactggc gcaggatcgc tcgatctgcg aagcttttga acgtggagcc
      781 actctcggac gccgccattc gcccgctcgt cgagcgctac gccgagctcg tctccgccct
      841 cgagctgccg gcaggtgagc cgctgctcgt gctgccgaat ggagagttct tcccggacgt
      901 gtactccggg gacgtggcga gcgtcgagcg gctcgccgcg cgcatgcaag gctacgcggg
      961 cctcgaaagc gtgaacatcg atttcggggt gagcggcgag atgttcggca gcgaaggcgg
     1021 ctgcggcacg ggcggctgcg ggagcggcgc ctgcgcgacc ccgtccgtcg aaatttccga
     1081 gccacgcctg cgccgcaccg aacagggtta tgccgtgcgc gttcctgccg tcgagctcgg
     1141 cgatccgatc gtgctcacgg ctcggattgc cactgcgctc ggcgcgatcg cgctgctcga
     1201 gcggcatgcc gacggagaga cgcgggttcg cgacgcggcg gcagccgagc tcgccgcggt
     1261 cacgctcggt ttcggcgtgc tcttgctcga ggcctcgtac ctgtacaaga agagctgcgg
     1321 tggcccgcac gtgacgcacg ccaccgagct cggctgcgcg gagctcgccg tggtctttgc
     1381 gctctccgcg gcccgcgaaa agcattcgtt gcgcgcagct ctcgcggagc tcgggacgac
     1441 tcagcgcgtc gtcgtgaagg acgcggccgc gctcgtcggc gaatcacccg cgctcgtgcg
     1501 ttcgctgcgc gagcatccgc tacgcgttgc gcgcggcgat ttcgcgctcc gggacggccg
     1561 ctcgtggctg tcgcgcctgt tcggcggtcg ctcgcgtccg aagagcgagg aagagcgcat
     1621 gacggcggcg ctcgcggcgc tcgagcgcgg agcgagcgtc gacgaactgg cggagctcgt
     1681 cggttcgcaa gacggcgagt gaaggcctga ctgccgacca ggcgcatccg gccaggcggc
     1741 gacgacgtcg tttcccttcg tgtggcggag acgcggctcg ctcggccgtc gcagtcgcat
     1801 tctggctatc gcggattttt tcgcggcgaa tcgaatcggc tcagcgtgcc gtgaggatct
     1861 gcgatttcta ttaacagcgg ggcgcgcctg gacagttgcc agcggagcct tgcatgcata
     1921 cgaagtcgct gccgaccctg gttttcggaa tttcgttagg aatcacaggc tgcggaaatc
     1981 cgagcaccgg cggatctgct ggcggaacgg gcggcactac cggcggtagc tcgacgggcg
     2041 gctcgtcgac agctggctct gccacgcagg gcggcgccgg cggcgggaca gcgactggcg
     2101 gaactggggg cggcggaact gggggcggcg gaactggggg cggcggaact gggactggcg
     2161 gaactgggac cggcggaact gggaccggcg gaactgggac tggcggaacc gcgggtcatg
     2221 gaactgcagg tgccggaacc gcggggggcg gaactgccgg tgccggaacg gccggcggaa
     2281 cgtcgagcgg cggccggggc tcgggcggta gggcagcggg tggaaacgcc ggtggcggcg
     2341 gcgctgcgac gggcggaagc gccggcatcg gcgcgggggg cggggctggt gccagcggca
     2401 gcggcgcggc ggttccgagc aaaggctgtg gcgtcatgga cggcgcgaaa aagctgacca
     2461 cgggcggcat gtccgtgatg agcggtctgc ccacgtcgac gaaacttacg ctgatgagcg
     2521 gcggaatgag tcacgaatac atcatcgaca ttccggcgga ttacgatccg acgcacccgt
     2581 atcgcctgat cttctcctgg caccaggcgt atggctcgga caccgggaat gcgaatggtc
     2641 tgcatcccgc caacgatggc cccaacttcg acgccaaaaa ctacgcctac ttcgggctcc
     2701 accgcgagat gaccgcggcg aacgataccg ccatcttcat tgcgcccggc ggcatcggca
     2761 accttccctg ggactacaat cgggacgttg tcctcttcga cgacctgctt gccctcgtcg
     2821 acacgaacct gtgcatcgac gacagccggg tcttc
//
LOCUS       DATIML010000761         2655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2469145, whole genome shotgun sequence.
ACCESSION   DATIML010000761 DATIML010000000
VERSION     DATIML010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2469145"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VLJ38_13090"
     CDS             <1..220
                     /locus_tag="VLJ38_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSU40504.1"
                     /translation="HPFHLHGFFFQPLDASGVAVRPVEEKDTINVPPVTEIKLGVSYD
                     NRPGAWMFHCHILDHAEAGMMGMLHVMN"
     gene            complement(246..710)
                     /locus_tag="VLJ38_13095"
     CDS             complement(246..710)
                     /locus_tag="VLJ38_13095"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSU40505.1"
                     /translation="MAQIRKILVPVDFSASSQAALAYAAEIAQKFGASIDLVHVWQAP
                     TFIPTATLPEVPNVDANIVDLVRKNAEEATARALAAAKAQGLPVQSARCEPGVPARGI
                     VEFAKTDGYDLIVIGTHGRTGLSHAMMGSVAEKVVRLAPCPVLTVRAGAAKD"
     gene            754..1917
                     /locus_tag="VLJ38_13100"
     CDS             754..1917
                     /locus_tag="VLJ38_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HSU40506.1"
                     /translation="MARRVNTTLHMVLSADAQGRNGSAPADPQARLRKIVDSALPGAH
                     ILRITPLKADTAAKDETKKGTGYGAPLRVELMHEGKRRALVLHTATPNDFGHDRRADR
                     AAAALLAADTFGLVADHVALIDVGAYRDGDDFVSLAGTGEFYVLTTHAEGRIYADDLR
                     RIAERGQVTDSDRARSLTLVRYLAKLHAERPQRAKPVYERFWRDTLGSGEGIFGIADG
                     YAEDVPRAPRARLERIEEACLKWRFRLRRRSERLRRTHGDFHPFNVLFDDASRLSLLD
                     TSRGSVGDPADDVTCMAVNYAFFALGHPGAWRAAFAPLWYAFWQSYLDATHDDELVEV
                     VAPLLAWRGLVLANPAWYPDLAAPDRERILSFVEHALASERFAPEMAAEFFET"
     gene            1914..2423
                     /locus_tag="VLJ38_13105"
     CDS             1914..2423
                     /locus_tag="VLJ38_13105"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HSU40507.1"
                     /translation="MKPGTVVWVSGLPSAGKSAFAEHALASFKAQNIGACLLDGDAVR
                     ACLVPKLGFSPEDRAHFYETLANLSALLARQGLVVLVAATAHARAFRERARAVAPAFV
                     EVWVDTPLEECARRDTKGLYAAARSGAAHDVPGANETYEPPLAPEVVAHGGFDGAAIA
                     RLVTLLARK"
     gene            2434..>2655
                     /locus_tag="VLJ38_13110"
     CDS             2434..>2655
                     /locus_tag="VLJ38_13110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40508.1"
                     /translation="MTMQASVALTALAVAIAAGGLIGAERQQAHAGRDGADFGGVRTF
                     PLLAIAGALAGFLRPVLGAYIVGALLVAVV"
BASE COUNT          409 a          922 c          865 g          459 t
ORIGIN      
        1 gcaccccttc cacttgcacg gcttcttctt tcagccgctc gacgcgtccg gcgtcgccgt
       61 gcggccagtc gaggagaaag acactatcaa cgtccctccc gtcacggaaa tcaagctcgg
      121 cgtcagctac gacaatcggc cgggcgcgtg gatgttccac tgccatatcc tcgatcacgc
      181 cgaagccggc atgatgggca tgctccacgt catgaactaa acgtcacgcg ccagcaacgg
      241 gcgtctcagt ccttggctgc cccggcccgc accgtcaaga ccggacatgg cgcgagccgc
      301 acgacctttt ccgcgacact ccccatcatt gcgtgagaca gccccgtgcg gccgtgcgtg
      361 ccaatcacga tcagatcgta gccgtcggtc ttcgcgaact ccacgatgcc gcgcgccggc
      421 actccgggtt cgcagcgggc gctctgcacg ggcaagccct gcgctttggc agcggcgaga
      481 gcgcgtgccg tcgcttcctc ggcattcttg cgcacgaggt cgacgatatt tgcatcgacg
      541 ttcggcactt ccggcagggt tgccgtcggg atgaacgtcg gggcctgcca cacgtgcacc
      601 aggtcgatgc tcgcgccgaa cttttgcgcg atctccgccg cgtaggcgag ggcagcctgc
      661 gacgatgccg aaaaatcgac gggaaccagg attttccgaa tctgagccat tgccggatgc
      721 gctgcagtcc gcgtgccaag gcatatcggc gacatggcac gccgcgtgaa tacaacgctg
      781 cacatggtcc tctcggctga cgcgcaggga agaaacggct cggcgccagc ggatccgcaa
      841 gctcgattac gcaaaatcgt cgattctgca ctgccgggtg cgcacatctt gcgcattacg
      901 ccgttgaagg cggacacggc cgccaaggat gaaacgaaaa aaggcacggg ttacggtgcg
      961 ccgctgcggg tcgagctcat gcacgagggt aagcgccgcg ccctcgtgct gcacaccgcg
     1021 acgcccaacg atttcggaca cgaccggcgg gcggatcgcg cggcggcggc gctgctcgct
     1081 gcagacacct tcggcctcgt tgccgaccac gttgcgctca tcgacgtggg tgcgtatcgc
     1141 gacggcgacg atttcgtctc gctcgccggt acgggggagt tttacgtgtt gacgacacac
     1201 gccgaaggtc ggatttatgc cgacgacttg cgacgcatcg ccgagcgcgg gcaagtcacg
     1261 gacagcgaca gagcgcggag tctcacgctc gtccgttatc tcgcgaagct ccacgccgaa
     1321 cgtccccagc gcgcgaagcc cgtgtacgaa cgcttctggc gcgacaccct cggcagcggc
     1381 gagggcattt tcggtatcgc cgacggttat gccgaggacg tcccgcgcgc gcctcgcgcg
     1441 cgactcgaac gcatcgagga agcctgcttg aagtggcgct ttcggttgcg ccgccggagc
     1501 gagcgcctcc gccgcacgca cggcgacttc caccctttca acgtgctctt cgacgacgcg
     1561 tcccggcttt ccctgctcga caccagtcgc ggctccgtcg gcgacccggc ggacgacgtg
     1621 acgtgcatgg ccgtcaacta cgcgttcttc gcgctcggac accccggtgc ttggcgcgct
     1681 gcgttcgcgc cgctctggta cgccttctgg caaagctacc tcgacgcgac gcacgacgac
     1741 gagctcgtgg aggtcgtcgc cccactgctc gcgtggcgtg ggctcgtgct cgccaatccc
     1801 gcctggtatc cggacctcgc cgcgcctgac cgcgagcgca ttctttcgtt cgtcgaacac
     1861 gcgctcgcct ccgagcgctt cgcgcccgaa atggcggcgg agtttttcga gacgtgaagc
     1921 ccgggacagt cgtgtgggtg agcgggctgc cgtcggcggg caagtccgcg ttcgctgagc
     1981 acgcgctagc gtcgttcaag gcgcagaaca tcggcgcttg tctgctggac ggcgatgcgg
     2041 tgcgcgcgtg cctcgtcccg aagctcgggt tttcgcccga ggaccgcgcg catttctacg
     2101 agacgctcgc caatctctcc gcgctgctcg ctcggcaggg actcgtcgtg ctcgtcgccg
     2161 cgaccgcgca cgcgcgtgct tttcgagagc gcgctcgggc ggtcgcgccc gcgttcgtcg
     2221 aagtttgggt ggatacgccg ctcgaggaat gcgcgcgccg cgataccaag ggtctgtacg
     2281 cggcggcgcg ctccggcgcg gcgcatgacg tgccgggagc caacgaaact tacgaaccac
     2341 cgctcgcgcc cgaggtcgtg gcgcacggcg gcttcgacgg cgccgcgatc gcgcggctcg
     2401 tgacgctcct cgcgcggaag tgatagcgtc ttcgtgacga tgcaagcaag cgttgcactc
     2461 accgcgcttg ccgtggccat cgccgccggc ggcctcatcg gcgccgagcg ccagcaagcc
     2521 cacgccggcc gcgatggggc ggatttcggc ggggtacgca cgtttccgct gctcgcgatt
     2581 gccggcgcgc tcgccggctt cctgcggccc gtactcggcg cgtacatcgt cggggcgctg
     2641 ctcgtcgccg tcgtg
//
LOCUS       DATIML010000762         1787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3626722, whole genome shotgun sequence.
ACCESSION   DATIML010000762 DATIML010000000
VERSION     DATIML010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3626722"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VLJ38_13115"
     CDS             complement(<1..346)
                     /locus_tag="VLJ38_13115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40509.1"
                     /translation="MRRIFGLLALLAVPACGQSVPSRGNSGGHGGRAGADTTAGSPAA
                     AGAGGLLAGSGAGGGAAGRGVVLPSPDYTIAPAAMVGCRSPDQAGCSKCCVGGDPCGY
                     RDGGADSSMLLGE"
     gene            complement(434..>1787)
                     /locus_tag="VLJ38_13120"
     CDS             complement(434..>1787)
                     /locus_tag="VLJ38_13120"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSU40510.1"
                     /translation="PLGPLHGVPISVKECLDLAGTPSTFGMESRRAAVAERDELHVAR
                     LRRAGAIVLGKTNVAQALLYFETDNPVYGRTQNPWDATRTPGGSSGGEAALVATGGSA
                     LGVGTDLGGSVRIPAAFCGIAGLKPTAGRLPDPGRGSVPFGQKAIESQIGLLARNVCD
                     LALALSVANGDSEGAPVMPLRDAKSIELEHVRVGFYEDDGTFPATAAARRAVREAAAA
                     LRARGATVLPWTPPDLEHALDLFFSVLVADGLAGLSRALGKTARDPRIADLERGASTP
                     RALLPLVRWLLERMHRPHIARIARNHGRRTAGEYWDLVERIAEYRDAFGLALDTAPGG
                     KLDVILCPPSPLPAFRHGAALELATMGSYTPLFNVLGYPAGVVPWTRVHADESEGRPA
                     ARDKAVQAARDAELESAGLPIGVQVAARPWREDSVLAVMAALETAAPDVPTLPIEPSP
                     "
BASE COUNT          277 a          656 c          612 g          242 t
ORIGIN      
        1 gctcgccgag gagcatgctc gaatcggcgc ccccgtcccg ataaccgcaa ggatcgccgc
       61 ccacgcagca cttggaacaa ccggcttgat cgggagagcg acagccgacc atggcggccg
      121 gagcgatcgt gtagtcggga ctcggcaaca ccacgccgcg gcccgcagcc ccaccgcccg
      181 ctccgctccc ggcgagcaag ccacccgccc cggctgccgc gggcgaaccg gcagtcgtgt
      241 cggcgcccgc tcttccgcca tgcccgcccg agttgccgcg cgaaggcacg ctctgtccgc
      301 acgccggcac ggccagcagc gcaagcagcc cgaagatccg cctcatctcc cggccatagc
      361 acgagttcgg ccttcgctct tctcgacacg actcctcggc attgcgcgag cgaacgagcg
      421 gcgagctccg aattcacggt gacggctcga tcggcagcgt cggaacgtct ggggcagcgg
      481 tttcgagcgc agccatcacc gcgagcacgc tgtcctcgcg ccaaggccgc gccgccacct
      541 gcacgccgat cggcagcccg gcgctctcga gctccgcgtc gcgcgccgcc tgtaccgcct
      601 tgtcgcgcgc cgcggggcgt ccctcgcttt cgtcagcgtg gacgcgtgtc cagggcacga
      661 cgcccgccgg ataaccgagg acgttgaaga gcggtgtgta cgagcccatg gtcgcgagct
      721 cgagcgccgc cccatgccgg aaagccggca gtggtgacgg cggacacagg atgacatcga
      781 gcttgccgcc cggggccgtg tcgagcgcca ggccgaaagc gtcgcggtac tcggcgattc
      841 gttcgacgag atcccagtac tcgcccgccg tgcgccgtcc gtgatttcgc gcgatgcgcg
      901 cgatgtgcgg ccggtgcatg cgctcgagca gccagcgcac gagcggcaag agcgcgcgcg
      961 gcgtcgacgc gcctctttcg agatcggcaa tgcgcgggtc gcgcgctgtc ttgccgagcg
     1021 cgcgcgagag cccggcgagt ccgtcggcga ccagcacgga gaagaacaga tcgagcgcgt
     1081 gctcgaggtc cggcggagtc cagggcagga cggtcgcacc gcgcgcccgg agcgcagccg
     1141 ccgcttcacg cacggcgcga cgcgccgcgg ccgtggccgg gaaggtgcca tcgtcttcgt
     1201 aaaagcccac gcgtacgtgc tcgagttcga tcgacttcgc gtcgcggagg ggcatcaccg
     1261 gcgcaccctc cgagtcaccg ttcgcgacgc tgagcgcgag cgcgagatcg cagacgttgc
     1321 gcgcgagcag gccgatctga ctttcgatcg ccttttggcc gaaaggaacg ctgccgcgac
     1381 cggggtccgg taggcgcccc gcggtgggct tgagacctgc gataccgcaa aacgcagcgg
     1441 ggatgcgcac gctgccgccg agatcggtgc cgacaccgag cgccgaaccg cccgttgcga
     1501 cgagcgccgc ctcgccgccg ctcgaaccgc cgggcgttcg cgttgcatcc caaggattct
     1561 gagtgcgccc gtacaccggg ttgtcggtct cgaagtaaag cagcgcctgc gcgacgttcg
     1621 ttttgccgag cacgatcgcg ccggctcgcc gcagccgcgc gacgtgaagc tcgtcccgtt
     1681 cggccacggc tgcgcgccgt gactccatgc cgaaggtcga gggcgtaccg gccaaatcga
     1741 ggcactcctt cacgctgatc ggcacgccgt gcagcggccc gagcggc
//
LOCUS       DATIML010000763         2652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2758270, whole genome shotgun sequence.
ACCESSION   DATIML010000763 DATIML010000000
VERSION     DATIML010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2758270"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..760
                     /locus_tag="VLJ38_13125"
     CDS             <1..760
                     /locus_tag="VLJ38_13125"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HSU40511.1"
                     /translation="GYDLGEYVPETIERRLRNALARSGLAHFGELQHRVLHDAACFSA
                     LLDQVTVQVSDMFRDPDFYRTFRERVVPHLRTYPQIKLWHAGCASGEEVYASAILLSE
                     EDLYERTQIYATDLSAGAVESARAGVYSQEQASAFAQNYALAGGTRQFDDYVVSGYGR
                     VAVRDKLKKNVVYFQHNLATDYAIGEMNVIFCRNVLFYFEKPLRQRVLGTFAQGLRRG
                     GFLCLGASEAAPEDSELFSAFAQRERIFRRAGVA"
     gene            757..1989
                     /locus_tag="VLJ38_13130"
     CDS             757..1989
                     /locus_tag="VLJ38_13130"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU40512.1"
                     /translation="MTLTHTLRADADATSCATSRPAVLLVDDVEANLVALEAVLSGLD
                     CELVRAHSGNEALRQLLRHDFAVMLLDVQMPGMDGYEVARHAHGNPSTRNVPILFLTA
                     MSDSQHHVTRGYDSGAVDFLFKPVDSVVVRSKVRIFLELYAARRQITDSNQALEQAYR
                     TLQATQAQLVQSAKMASLGELVAGIAHEINNPLAFALSHLDTALRCVGPIEAASDPSL
                     SDGARPHWSKMKSRLGEMYLGLNRIRDLVVKLRTFSRIDGDERGVANVKECVDAVLTI
                     LGNRLRDRIEVECEFGEPATIECFPGLLNQAIMNLVANSADAIEGRGRIRVTGCAVED
                     RYVLVVADSGAGIPAELRQRIFEPFFTTKGVGEGTGLGLSITYSIVAKHGGTIRVDCP
                     LEGGTAMTMTLPLVAPGD"
     gene            complement(2289..>2652)
                     /locus_tag="VLJ38_13135"
     CDS             complement(2289..>2652)
                     /locus_tag="VLJ38_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40513.1"
                     /translation="VPLLSRAAMPLAIPLRERLLNLMVADGMAPGAAFVALSSAALAA
                     VGLVLVELELTRTEGPSSVRQRFARMREWARGPACVGYPTTRQALTSVEAFDLNRNFA
                     LAMDTFVKGLELTRAARA"
BASE COUNT          451 a          883 c          883 g          435 t
ORIGIN      
        1 cggctacgat ctcggcgagt acgtgccgga gacgatcgag cggcggctgc gcaatgcact
       61 cgcccgctcg ggcctcgccc atttcggcga gctccagcac cgcgtgctcc acgacgccgc
      121 ctgcttctct gcgctcttgg accaagtcac cgttcaagtg agcgacatgt tccgcgatcc
      181 ggacttttat cggacgtttc gcgagcgcgt cgtgccgcac ctgcgcactt acccgcagat
      241 caagctgtgg cacgccggct gtgcgtcggg agaagaggtc tacgcgagcg cgatcctgct
      301 cagcgaagag gacctctacg aacggacgca aatttacgcg acggacctca gcgccggagc
      361 cgtcgagagc gcgcgcgccg gcgtgtactc gcaagagcaa gcgtcggcgt tcgcgcagaa
      421 ttacgcgctc gccggcggca cgcggcaatt cgacgactac gtcgtgagcg gctacggccg
      481 cgtcgccgtg cgcgacaaac tcaagaagaa cgtcgtgtac ttccagcaca atctcgcgac
      541 cgactacgct atcggggaga tgaacgtcat tttctgccgc aacgtgctgt tctacttcga
      601 aaagccgctg cggcagcgtg tgctcggcac gttcgcgcaa gggctccgcc gaggaggatt
      661 tctgtgtttg ggcgcgagcg aagccgctcc cgaagacagc gagctgttct cggctttcgc
      721 gcagcgcgag cggatcttcc ggcgcgcggg ggtcgcgtga cgctgacgca tacgctgcgc
      781 gcggacgcag acgcgacgtc ctgcgcgacg tcgcgcccgg cggtgctgct cgtcgacgac
      841 gtcgaggcga acctggtggc gctcgaggcg gtgctctccg ggctcgactg cgagctcgtg
      901 cgcgcccact cgggcaacga ggcgctccgg caactcctgc gccacgactt tgccgtcatg
      961 ctgctcgacg tgcaaatgcc ggggatggac ggctacgagg tcgcgcgcca cgcccacggc
     1021 aatccgagca cgcgcaacgt gccgatccta tttttgaccg ccatgagcga ctcgcaacac
     1081 cacgtgacgc ggggctacga ctccggcgcc gtcgatttcc tgttcaagcc ggtcgactcc
     1141 gtggtcgtgc gcagcaaagt tcggatcttc ctcgagctct acgctgcgcg ccggcaaatc
     1201 accgattcga atcaggccct cgagcaggcg tacagaacgc tgcaggcgac gcaggcccag
     1261 ctcgtgcaat cggcaaaaat ggcctcgctc ggcgagctcg tcgcgggcat cgcgcacgaa
     1321 atcaacaacc cgctcgcgtt tgcgctcagt cacctcgaca cggcgctgcg ctgcgtgggt
     1381 cccatcgagg cggcgagcga tccctcgctc tcggacggcg cgcgtccgca ctggagcaag
     1441 atgaagagcc gcctcggcga gatgtacctc gggctcaatc gtatccgcga tctggtcgtg
     1501 aagctgcgca ccttctcgcg catcgacggc gacgagcgcg gcgtcgccaa cgtgaaggaa
     1561 tgcgtcgatg cggtgctcac gattctcggc aaccggctgc gcgatcgcat cgaggtcgaa
     1621 tgcgaattcg gagagccggc gacgatcgag tgctttccgg gcctcttgaa ccaggcgatc
     1681 atgaacctcg tggcgaactc ggcggacgcc atcgagggcc gcggccgcat tcgtgtgacc
     1741 ggttgcgccg tcgaggatcg ctacgttctc gtcgtcgcgg actccggggc gggcattccc
     1801 gccgagctgc gccagcgcat cttcgagcct tttttcacga ccaagggcgt cggggagggc
     1861 acggggctcg ggctctcgat cacctactcg atcgtggcga agcacggtgg aacgatccgc
     1921 gtggattgcc cgctggaggg cggcaccgcg atgacgatga cgctgccgct ggtcgctccg
     1981 ggcgactaga ctcgagttga gcagtcttgg aagaccagat cacgatcggc acgggtcgcc
     2041 aatcgctaac gtgaaattcc ggcgaggccg gcggttgggc cgcttcgacg ggctagtgac
     2101 gcaggacctt cggtagcgcc gtttcgcatg cgcgacaccg agaaagcctc gtaacgagct
     2161 tcccttcgcg ccccggaaaa ggcggctcgg ctctggcggc gaatcgcgat cttttctccc
     2221 aagaccgccc acgtcgagtc tagtacgacg gcgccgatct gcgttccggg cgactagggc
     2281 cttcgagttc aggcgcgagc cgcgcgcgtg agctccaaac ctttgacgaa cgtgtccatc
     2341 gcgagcgcga agttgcggtt caaatcgaag gcttcgaccg aggtgagcgc ctgccgcgtc
     2401 gtcggatacc cgacgcacgc cggaccacgc gcccattcgc gcatgcgggc gaagcgctgc
     2461 cggacgctcg aggggccctc cgtgcgcgtg agctcgagct cgacgagcac gagcccgacg
     2521 gcggcgagcg ccgcgctcga gagggccacg aacgcggctc cgggcgccat gccgtccgcc
     2581 accatcaggt tgagcagccg ctcgcggagc ggaatggcca gcggcatggc ggcgcgcgag
     2641 agcagcggca cc
//
LOCUS       DATIML010000764         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3626751, whole genome shotgun sequence.
ACCESSION   DATIML010000764 DATIML010000000
VERSION     DATIML010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3626751"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VLJ38_13140"
     CDS             <1..221
                     /locus_tag="VLJ38_13140"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSU40514.1"
                     /translation="KKITVAGELEGNIEAASQVELQQSGVLIGDLKAGSLTVAAGSRM
                     RGQAEFGWEEKASSSKANRNGTENGSAS"
     gene            218..607
                     /locus_tag="VLJ38_13145"
     CDS             218..607
                     /locus_tag="VLJ38_13145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40515.1"
                     /translation="MSATRPGPARPGTAGATRTCPHCKATILESASICPQCKHHVRFD
                     ADVAKRALETTSALRVEGTIRHPSDGEAWEYSMVLSIRNDRDEEIDRKIVGVGAMRPG
                     EQRTFTLTVEIFGDGTTKNTGGTSRKH"
     gene            complement(620..1990)
                     /gene="gor"
                     /locus_tag="VLJ38_13150"
     CDS             complement(620..1990)
                     /gene="gor"
                     /locus_tag="VLJ38_13150"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF004776.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004362 - glutathione-disulfide reductase
                     (NADP) activity [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HSU40516.1"
                     /translation="MRELDFIVIGGGSGGLAAARRAARHGARALVVEAGALGGTCVNV
                     GCVPKKVSYHAAELAGLFHDAADYGFELAPPTFDLGRLKRARDAYVERLRGIYAQNLE
                     RDGAERVNGWATLVDAHSVEVAGERYSAPHVLIATGGQPRLPSIAGAELGLSSDGFFG
                     LERLPERPLVVGAGYVAVELGGIFQALGASVTFVVRGHELLRYFDPMLRNALAEELTQ
                     TGAKLEFGFEPDRVERAPGGVRLVGKDGRVLAGDCLLWAIGREPMTSRMGLEQAGVEL
                     DPEGYVLVDEFQNTNVPGVYALGDVIGGDRMLTPVAIAAGRKLADRLFGGQPEARVDY
                     TDIPTVVFSHPPIGTVGLSEPAARERFGDADVRVYTTAFTSLYHGVTRRKPRTRMKLV
                     VSGPEERVVGVHSIGLGSDELLQGFAVAVKLGAKKADLDRTLAIHPTAAEELVLMGEL
                     NRTPVI"
BASE COUNT          374 a          707 c          693 g          293 t
ORIGIN      
        1 cgaagaagat caccgtcgcc ggcgagctcg aaggcaacat cgaagcggct tcgcaagtcg
       61 agctgcagca gtccggtgta ctgatcggcg atctcaaggc cggttcgctg acggtcgccg
      121 cgggctcgcg catgcgcggc caggccgagt tcggctggga ggagaaagcg tcctcgtcga
      181 aagcgaatcg caacggtacg gagaacggat ccgcatcatg agcgctacgc gtccggggcc
      241 tgcgcgcccc ggtaccgccg gcgcgacccg gacctgcccg cactgcaagg cgacgattct
      301 cgaaagcgcg agcatctgcc cgcaatgcaa gcaccacgtc cgcttcgacg cggacgtggc
      361 caagcgcgcg cttgagacga cgtcggcgct ccgcgtcgaa ggcacgatcc ggcatccgtc
      421 cgacggcgaa gcgtgggagt actcgatggt gctctcgatc cgcaacgatc gcgacgagga
      481 gatcgatcgc aagatcgtcg gcgtcggtgc gatgcgtccc ggcgagcagc gcacgttcac
      541 gctgaccgtc gagatcttcg gcgacggcac cacgaaaaac accggcggca cttcacgcaa
      601 gcactgagaa cggcgccggt cagatgaccg gcgtccgatt caattcgccc atcaacacga
      661 gctcttcggc ggcggtcgga tggatggcca gcgtacggtc gagatcggct tttttcgcgc
      721 cgagcttcac cgccacggcg aagccctgca agagctcgtc cgaaccgagc ccgatcgagt
      781 gcacgccgac gacgcgctct tcgggtccgc tcacgacgag cttcatgcgg gtgcgaggct
      841 ttcggcgcgt gacgccgtga tagaggctcg tgaacgcagt cgtgtaaacg cggacgtccg
      901 cgtcgccgaa gcgctcgcgc gcggcgggtt cgctcaagcc gacggtgccg atcggcgggt
      961 gactgaacac gaccgtaggg atgtcggtgt agtcgacgcg cgcctcgggc tgaccgccga
     1021 acaggcgatc ggcgagcttg cgaccggccg cgatggcgac cggcgtgagc atgcgatcgc
     1081 caccgatcac gtccccgagc gcgtaaacac cgggcacatt ggtattctga aattcgtcga
     1141 ccaaaacgta accctcggga tcgagctcta ccccggcttg ctcgagcccc atgcgcgacg
     1201 tcatcggttc gcggccgatg gcccagagca agcagtcgcc cgcgagcacc cgcccgtctt
     1261 tgccgacgag gcgcacgccg cccggagcac gctcgacgcg gtccggctcg aagccgaact
     1321 cgagcttcgc acccgtttgc gtgagctcct cggcgagcgc gttccggagc atggggtcga
     1381 agtagcgcaa gagctcgtgc ccgcgcacga cgaacgtcac gctcgcgccg agcgcttgaa
     1441 aaattccgcc gagctcgacc gcgacatagc cggcgcccac gaccagcggc cgttcgggta
     1501 gccgttccag cccaaaaaag ccgtccgaac tgagaccgag ctcggcgccg gcgatgctgg
     1561 gcagacgcgg ctgaccaccg gtcgcgatga ggacgtgcgg cgccgagtag cgctcgcccg
     1621 cgacctcgac tgagtgagca tcgacgagcg tggcccagcc gttcacgcgc tcggcgccgt
     1681 cccgctcgag attttgcgca tagatgccac gcaggcgctc gacgtacgcg tcgcgcgcgc
     1741 gtttgagccg gccgagatcg aaggtcggcg gagccagctc gaagccgtaa tcggcagcat
     1801 cgtggaagag gccggcgagc tcggcggcgt gatagctgac ctttttgggc acgcagccga
     1861 cattcacgca cgtgcctccg agggcgccgg cctcgaccac gagcgctcgg gcgccgtggc
     1921 gcgcggctcg acgcgcggcc gcaaggcccc cactgccccc gccgatcacg atgaaatcga
     1981 gctcccgcat gggcacgaca gcatacgccg ctgttcgggg ccgagttcca gcatcttcac
     2041 gggcgggcga cgaaaggccc cccgaac
//
LOCUS       DATIML010000765         3961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3050053, whole genome shotgun sequence.
ACCESSION   DATIML010000765 DATIML010000000
VERSION     DATIML010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3050053"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..830
                     /locus_tag="VLJ38_13155"
     CDS             159..830
                     /locus_tag="VLJ38_13155"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSU40517.1"
                     /translation="MLRAVLLDVDGTLIDSNDAHARAWVDAFAEFGRTVPFERVRPLI
                     GKGGDKLMPEVSGLDSESAEGKAIDERRSAIFRDRYLPTLKPFPRAKELLERMRADGL
                     ELVVATSAKKDELEPLLAVSGASRLVSARTSSDDAENSKPDGDIVAAALSRAKVAAAD
                     ALMLGDTPYDIEAAARSGVSTVALRSGGWDDAALSQALAIYADVSELFARYAESPFKR
                     APDEP"
     gene            complement(860..1555)
                     /locus_tag="VLJ38_13160"
     CDS             complement(860..1555)
                     /locus_tag="VLJ38_13160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40518.1"
                     /translation="MQHAFAKIAVVSQALAGLAACAGTARQTEPAKTSAAPSAPAAPV
                     SAAASGDHFEDPAAGVAIDKRPSWAFMPLEAEVANRRAVSVGDENTDKLMHEGSTPPL
                     VVIARYTEPSETPNPTLKINLRRLGDLSGASAVEITRAVAHVMSKAVPSFTLDDEIRP
                     AQVSGLAAGTFRAHFSVEVSNLGRSFVVKTQGWIVPRGQDTFIIAASDPTEGAANYEA
                     DFQAMVATIVIRK"
     gene            1606..2394
                     /locus_tag="VLJ38_13165"
     CDS             1606..2394
                     /locus_tag="VLJ38_13165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40519.1"
                     /translation="MDPPFARCGILRAMQRFLLRHVWLRLVMSAVPAASALSLQGCSQ
                     QAAAPAAAPAGQASATALPFEPSKLGSSIFVMHQISDLDAYEKYFESGDTHRETAGVD
                     GYLLSRLADGRVIVHLFADDLNRVQSVLNSEAMQGRLHRPDAPDTSQVWVTRDASLSL
                     PVTPPPGQTFSLYFKLEVPDFDAFKRGFEARDRLYAAHGAIGRGLHQSTTGRFVVVHF
                     VGTSRDELAALTKDPDFVALLSLAAPDGAGQPFLAEDLAHSRPK"
     gene            2470..3396
                     /gene="prs"
                     /locus_tag="VLJ38_13170"
     CDS             2470..3396
                     /gene="prs"
                     /locus_tag="VLJ38_13170"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HSU40520.1"
                     /translation="MSSRVPRRLLVTIASYAYLEPRFLAASELQAVPVERKWFPDGER
                     YLRVAEDVRGADVVLLGGTPSDLDWLELYDLGFAISRAGARSLSIVIPYFGYSTMERA
                     VLAGEVVTAKTRARLVSSIPPCEGGTRVILFDLHTDGIEFYFGHGHLTRHVYGAPIIT
                     RLIHDVTHGEPFVLGATDAGRAKWVESLAKKLGVEPAFVYKRRDSGSGALRVTGVNAD
                     VRGLDVVVYDDMIRTGASLLQAGRAYLEAGARRVHAVASHLVLPGESLAKLEESGVFA
                     SIHGTDSHPSSERIVDGVVAPVSALLAEALES"
     gene            complement(3418..>3961)
                     /locus_tag="VLJ38_13175"
     CDS             complement(3418..>3961)
                     /locus_tag="VLJ38_13175"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU40521.1"
                     /translation="YELQFFTNHMGHFMLVTGLLSRLAEHGRVVVVSSSAHRQAPRAG
                     IEFDNLDGSKGYGAWSAYGQSKFANLLFAKELARRLAAGKQTANAIHPGVIRTNLQRH
                     MSSPLAALLNASGPLALKSVAEGAATQVYVATHPTLAAVSGRYFADCNLATPRADADD
                     EALARKLWETSEAIVAKLRA"
BASE COUNT          626 a         1347 c         1284 g          704 t
ORIGIN      
        1 ctctacttca ccgccaatca gctccaccga cagccgcgct accatgaggg ccaggacgag
       61 cgggaaaagc cgtacgtcct gtttcggatc ccggtggacg gcacgccagt cgcgctgcgg
      121 tagccgtcgg tggcgcgcag cttgcatcac gcgacgccat gcttcgagcc gtgcttttgg
      181 acgtggacgg aacgctaatc gatagcaatg acgctcatgc ccgggcgtgg gtcgatgctt
      241 tcgcggagtt cgggcgcacg gtgccgttcg agcgcgtccg gccgctcatc ggtaaaggcg
      301 gcgacaagct gatgccggaa gtgagcgggc tcgactccga atcagccgaa ggcaaggcca
      361 tcgacgagcg gcgctccgcg atctttcgag accgttacct gccgacgctg aagccgtttc
      421 cgagggcaaa agagctgctc gagcgcatgc gcgccgacgg gctagagctc gtcgtggcta
      481 cctcggccaa gaaagacgag ctcgagccat tgctcgcggt ctcgggcgcg tctcggctgg
      541 tgagcgctcg aacgtcgagt gacgacgccg agaactccaa gccggacggc gatatcgtgg
      601 cggcggctct gtcgcgcgcc aaggttgcgg ccgccgacgc gctcatgctc ggcgacacgc
      661 cgtacgacat cgaagccgcc gcccgcagcg gagtcagcac cgtggctctg cgctccggcg
      721 gttgggacga cgccgcgttg agtcaggcgc tcgcgatcta cgcggacgtg agtgagctct
      781 tcgcgcgtta cgcggagtcg ccgttcaagc gcgctccgga cgagccctga ccctgcgctc
      841 atttacacca gtcgccgcgt cactttcgaa tcacgatcgt agccaccatg gcttgaaaat
      901 cagcctcgta gttggcggca ccctccgtgg ggtcggacgc ggcgatgatg aacgtgtctt
      961 gaccgcgcgg cacgatccag ccctgcgtct tgacgacgaa agaccgcccg aggttcgaca
     1021 cctcgacgct gaagtgcgcg cggaacgtgc cggcagcgag gccgctcact tgcgccgggc
     1081 gaatttcgtc gtcgagcgtg aagctcggca ccgctttgga catgacatgc gcgacggcgc
     1141 gcgtgatttc gacggcggat gcgccgctca ggtctccgag ccggcgcaag ttgatcttca
     1201 acgtcggatt cggcgtctcg ctcggctcgg tgtagcgcgc gatgaccacg agcggcggtg
     1261 tcgaaccctc atgcatcagc ttgtccgtgt tctcgtcgcc gacgctgacg gcgcgccgat
     1321 tggccacttc ggcctcgagc ggcatgaacg cccagcttgg ccgcttgtcg atcgcgaccc
     1381 cagcggccgg atcttcgaaa tggtccccgc tcgcagccgc gctgaccggc gcggcaggcg
     1441 cgctaggcgc ggcagaggtc ttggccggct ccgtctgccg cgcggtccct gcgcaggcgg
     1501 cgagcccggc cagagcttgg ctgacgaccg cgatcttcgc gaaagcgtgc tgcatcgggc
     1561 tctggacctt ttaccgcttc acgggatatt cggctcatct tttcgatgga tccgccgttc
     1621 gcgcgctgtg gcatcctgcg cgccatgcaa cgcttcctgc tgcggcacgt ctggcttcgc
     1681 ttagtcatgt ctgcggttcc ggccgcaagc gccctttcgc tacagggctg ttcccagcag
     1741 gcagctgcac cggccgccgc gccagccggg caagcgagtg ccacggcgtt gcccttcgag
     1801 ccgagcaaac tcggctcgag catcttcgtc atgcaccaga tcagcgacct cgacgcctac
     1861 gagaagtact tcgaaagcgg agatacgcac cgcgagacgg ccggcgtgga cggatacctt
     1921 ttgagccgtc tcgctgacgg ccgcgtgatc gttcacctct ttgccgacga cctcaatcgc
     1981 gttcaatcgg tcctcaactc cgaagcaatg cagggccgcc tccatcggcc ggacgcgccc
     2041 gacacgtcgc aggtttgggt cactcgcgac gcgtccctca gtctgccggt caccccgccg
     2101 ccgggccaga ccttcagtct ctacttcaag ctcgaagtcc ccgacttcga cgcgttcaag
     2161 cgcgggttcg aagcgcggga tcgcctgtac gccgcacacg gcgcgatcgg tcgcggcctg
     2221 caccagagca cgactgggcg tttcgtggtc gttcatttcg tcggcacgtc gcgcgacgag
     2281 ctcgctgcgc tcacgaaaga tccggatttc gtggcgctgc tgtcgctcgc cgcgcccgac
     2341 ggcgctggcc agccgttctt ggccgaggat ctcgcgcaca gtcgtccgaa gtgacacgaa
     2401 cgcgtcgcgg gccacgcgaa accgcgagtc caaagtgcgt tttgtccgtg agcccgctat
     2461 gacccccgga tgagctcgcg tgtcccccgg cgtctgctgg tcaccatcgc ttcgtacgct
     2521 tatctcgaac cccgcttctt ggccgcgagc gagctccaag ccgtcccggt cgaacgcaag
     2581 tggttccccg acggcgagcg ctacctccgt gtcgccgaag acgtgcgcgg cgccgacgtc
     2641 gtcttgctcg gcggtacgcc gagcgacctc gactggctcg aactctacga cctcggcttt
     2701 gcgatctcgc gggccggcgc gcgctcactg tcgatcgtca tcccttattt cggctactcc
     2761 accatggagc gcgccgtgct ggcgggggag gtcgtcaccg caaaaacgcg cgcgcgcctc
     2821 gtctcatcca ttccgccgtg cgaaggcggc acccgcgtca tcctcttcga tctgcacacc
     2881 gacggcatcg aattctactt cggccacggc cacctcactc gccacgtcta cggagcaccg
     2941 atcatcacgc gtctcattca cgacgtgacg cacggcgagc ccttcgtcct cggcgcgacg
     3001 gacgccgggc gcgccaaatg ggtcgaaagc ctcgccaaga agctcggtgt cgaaccggcg
     3061 ttcgtctaca agcgccgcga cagcggcagc ggcgccctgc gcgtcaccgg agtcaacgcc
     3121 gacgtgcgcg ggctcgacgt cgtcgtctac gacgacatga tccgcaccgg cgcgtccctg
     3181 ctgcaagccg gtcgagctta cctcgaggcg ggcgcgcgcc gtgtccacgc cgtcgcgagc
     3241 catctcgtcc tgccgggcga gtccttggcg aagctcgaag agtccggtgt ctttgcgtcc
     3301 attcacggca cggattcgca cccgtcgagc gaaaggatcg tggacggagt cgtcgcgccc
     3361 gtgagcgcgc tcttggcgga ggccctggag agctagcgct cgcgttggtt tcgcggttca
     3421 agcgcgaagc ttggccacga ttgcttcgga cgtttcccag agcttgcgag cgagggcttc
     3481 gtcgtcggca tcggcgcgcg gcgtggccag gttgcaatcg gcaaagtagc ggccggagac
     3541 ggccgcgagc gtagggtgcg tcgcgacgta aacttgagtc gcggcgcctt cggccacgct
     3601 tttcaatgcg agcgggccgg acgcgttgag cagcgccgcg agcggcgagc tcatgtggcg
     3661 ctgcagattc gtccgaatca cgcccggatg tatggcgttc gccgtctgct ttccggcggc
     3721 gagccgccgc gcgagctcct tcgcgaacag cagattcgcg aatttcgatt ggccgtaagc
     3781 ggaccaggcg ccgtagccct tcgagccatc gaggttgtcg aactcgatgc ccgcgcgcgg
     3841 cgcttgccgg tgcgcactgc tgctcacgac gacgacacgg ccgtgctcgg cgagtcgcga
     3901 aagcaggccg gtcacgagca tgaaatgacc catgtgattg gtgaagaact gaagctcgta
     3961 g
//
LOCUS       DATIML010000766         1956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1028589, whole genome shotgun sequence.
ACCESSION   DATIML010000766 DATIML010000000
VERSION     DATIML010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028589"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /locus_tag="VLJ38_13180"
     CDS             <1..599
                     /locus_tag="VLJ38_13180"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HSU40522.1"
                     /translation="GSVGMASGAGSGGGTNPAAGSSSTSDGGEAGAHGADLDDTTLLE
                     QARRSYAAWQKRTEDPQPISAQIFALCRGPTQAEEDFVASEHGDRLYLLDWIDPGAAA
                     VFAAASSGPFPVGATIVKEKLVLESGGYVLHALGLMLKREPGFDPAHGDWQFGYWNAA
                     DGMIAGAAENAHCGNCHAGSSTDFVFMDASWHVDGAGG"
     gene            complement(659..>1956)
                     /locus_tag="VLJ38_13185"
     CDS             complement(659..>1956)
                     /locus_tag="VLJ38_13185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40523.1"
                     /translation="AVHTVPLVAVVTLAFRAQRGARAAVERALGLAAASVGGVLLSGS
                     VPASFTQSLSAWIAAAVAGLLLHVVTHDLGRDLPTTPVARAADWAAAALGLVTSTLGA
                     DSDLQILRRSLFHAFTTGALHGAPAIALSLAAALLLTRSAARHRLAAFPAPAAALDGA
                     ALAATLANLPLGIFFGLGTALTAKTIPLLPGHRLENTPPPSTLSPNPARPHSHPHADP
                     HAHPHADPHAHPHADPHSHSHAGPHSHADPHSDAHATHTPPSPIHIDSGAEFATATTL
                     LREQLAWALTGLVLYALLSASLGPDALARLSLPIALAGAAVCGLPLELPAVTAVFIAA
                     ASWQHGLRLEAALAFAVLASLRVPRRLSVLLFEVAAGIGVGLAAGYFDAAHRLAPLLL
                     PLPLSALALALLLATTVFTAWQHGIRGLFAGVFHSHDSA"
BASE COUNT          347 a          538 c          824 g          247 t
ORIGIN      
        1 cgggcagcgt cggcatggcg agtggcgccg gcagcggcgg cggcacgaac ccagcggccg
       61 gcagctcgag cacctcggat ggcggcgagg ctggagcgca cggggcggat ctcgacgaca
      121 ccacactcct cgagcaagcg cgccgcagct acgcggcttg gcagaagagg accgaagacc
      181 cccagccaat ctccgcccag atcttcgcgc tctgccgtgg tcccacgcaa gccgaagagg
      241 acttcgtcgc gagcgagcac ggcgacaggc tctacttgct cgactggatc gacccgggcg
      301 ctgccgccgt cttcgcggcg gcaagcagcg gacccttccc ggtgggcgcg accatcgtca
      361 aagagaagct cgtgctcgaa agcggaggtt acgtccttca cgcgcttggc ttgatgctca
      421 agcgcgagcc gggtttcgat cccgcacacg gcgattggca gttcggttac tggaacgccg
      481 cggatggcat gatcgccgga gccgccgaga acgcgcactg tggcaactgc catgcgggct
      541 cgagcacgga cttcgtcttc atggacgcga gctggcacgt cgacggcgct ggcggctgag
      601 ccgagcgtcg gaacgccgga tggcgagggc ggcgctcgtg agcgggtcga tggacgggtc
      661 aggcgctgtc gtgtgaatgg aagacgccgg cgaacaggcc gcgaatgccg tgttgccagg
      721 cggtaaagac ggtcgtcgcg agaaggagcg cgagcgcgag cgcgctcagc gggagcggca
      781 ggagcagcgg cgcgagacga tgggcggcgt cgaagtagcc ggcggcgagt ccgacgccga
      841 ttccggcggc cacctcgaaa aggagcacgg agagtcttct gggcacacgc agtgaagcca
      901 agacggcaaa ggcgagggca gcctcgagcc gcaagccgtg ttgccagctg gccgcggcga
      961 tgaagacggc ggtgaccgcg ggcagttcga gcgggagacc gcagacggcg gcgccagcga
     1021 gtgcgatggg gaggctgagc cgagcgagag cgtccgggcc gagcgatgcg gagaggagcg
     1081 cgtacagaac gagtcccgtc agtgcccagg cgagctgctc gcggagcagc gtcgtggcgg
     1141 tcgcgaattc agcgccggag tcgatgtgga tgggtgaggg gggcgtgtgc gtggcgtggg
     1201 cgtcagagtg agggtcagcg tgagagtgag ggccagcgtg cgagtgagag tgagggtcag
     1261 cgtgcgggtg agcgtgaggg tcagcgtgcg ggtgagcgtg agggtcagcg tgcgggtgag
     1321 agtgagggcg ggcaggattg ggggagagag tggacggggg aggggtgttt tcgagccggt
     1381 gccctgggag cagggggatt gttttggcgg tcagtgccgt gcccaaacca aaaaaaatac
     1441 ccaaaggaag gttggctaaa gtggccgcca acgcggcgcc gtcgagggcc gcggcgggtg
     1501 ctggaaaagc agcgagtcgg tgacgtgcgg cggaacgcgt gaggaggagc gctgcggcga
     1561 ggctcagggc gatggcgggc gcgccgtgga gcgctcctgt ggtgaaggcg tggaataggg
     1621 agcgccggag tatttggagg tcgctgtcgg cgccgagtgt gctcgtaacg aggccgagtg
     1681 cggcggctgc ccagtcggcg gcgcgtgcga cgggcgtcgt gggaagatcg cggccgagat
     1741 cgtgcgtgac gacgtgcagg aggaggccgg cgacggcagc ggcgatccac gcggagagcg
     1801 attgcgtgaa ggaggcgggg acggagccag agagcaggac gccgccgacg ctcgccgcgg
     1861 cgagtccgag ggcgcgttcg acggccgcgc gcgcgccgcg ttgggcgcga aaggcgaggg
     1921 tgaccacggc gacgagcggc acggtgtgca cggcga
//
LOCUS       DATIML010000767         4861 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2759656, whole genome shotgun sequence.
ACCESSION   DATIML010000767 DATIML010000000
VERSION     DATIML010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4861
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2759656"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VLJ38_13190"
     CDS             <1..244
                     /locus_tag="VLJ38_13190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40524.1"
                     /translation="MPCTDSDEINYYVQCYQNDPSTQEDTDFLKCLGMQGMTDSMGAT
                     TIDCQAAGTACGATPAGTGGAGGMGSAGASAGSSSH"
     gene            complement(252..617)
                     /locus_tag="VLJ38_13195"
     CDS             complement(252..617)
                     /locus_tag="VLJ38_13195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40525.1"
                     /translation="MYQPWMFSAMLAAGTGLVAFSVKLQHPSVPSLAPEPPAAAVHVV
                     PPPAPTLVAEPADTNPVLQIPAIVIEGTRHRHAAPSEPAATEPAPAERPCSEWRDLGP
                     THVVSGQPSGNLAVRELCR"
     gene            complement(800..1804)
                     /locus_tag="VLJ38_13200"
     CDS             complement(800..1804)
                     /locus_tag="VLJ38_13200"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU40526.1"
                     /translation="MEDFPSDTLLEVKSVSVHFPLPGSESAVRAVDAVSLELRRGETL
                     ALVGESGCGKSTLARAIMGLRPPTSGEVWFDGARMAPLGTRARHALCRRLQMVFQDPD
                     ASLDPRRTIASAVAEGVELHETLSRDGVETRVLELLASVGIDPALRARYPHELSGGQK
                     QRVCIARALATRPDLLVCDEAVSALDVSIQAQIINLLADLRDRFQLAYLFITHDLRVV
                     RQIADRVAVMYLGQIVELAPTQALFERPLHPYTRALLAAVPNLDAARRPPVPALSGEV
                     PSPASPPAGCRFHPRCPFVMDRCRREAPSAYEHDHRSARCFLVEREMVQNADREFDSH
                     "
     gene            2080..2919
                     /locus_tag="VLJ38_13205"
     CDS             2080..2919
                     /locus_tag="VLJ38_13205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40527.1"
                     /translation="MASGGTTGGGTSNTGGTTGGSFSTGGTTSTTGGTGTGGTSAAGG
                     RSAAGGTTATGGGAGRVSSTGGTTATGGTTATGGTTATGGMPATAGTSGTSGVACDTA
                     WMVTADGFVRMPAKGGACWSGYAFAGGDTTTTTMVTFPGGGTDFSKAMGKLEISGTVG
                     AATADNNYAGNVYFGFNVGQTAGSMAAGTVKPTGTSLTITCTGCATPKMRAQLVSSAA
                     TWCTDLTSGTPILYSSFKQKCYDATPGAAYANDAITSIQISIPGAAAAATFDVTLVSV
                     TEQ"
     gene            complement(2927..3904)
                     /locus_tag="VLJ38_13210"
     CDS             complement(2927..3904)
                     /locus_tag="VLJ38_13210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU40528.1"
                     /translation="MPLLRVRELTTEFRTEDRVVRAVDHVSFDLQKGELLGIVGESGS
                     GKSATSLSILHLLPPQGRITHGSVELAGQNLLALPEPAMRGVRGARIAMIFQDPMTAL
                     NPYLRIGEQLVEGAILHLGLGARAAKERARALLDRVRIPDAAARLESYPHELSGGMRQ
                     RVMIAMALLCDPELIIADEPTTALDVTVQAQILELLNELRRERGLSILLITHDLGVVA
                     STCDRVLVMYAGRVVELAPAAELFARPLHPYTRALMQSLPRLDAVPGRRLETIPGLPP
                     RLDRGPFTECSFAPRCRFVHDACRVAEPALSEDVPGRLRRCVLPVDELE"
     gene            complement(3934..>4861)
                     /locus_tag="VLJ38_13215"
     CDS             complement(3934..>4861)
                     /locus_tag="VLJ38_13215"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU40529.1"
                     /translation="RRPRVRVARSARAEPFMSTRVLAASPHSPAARAWRRLKQNRLAR
                     VGLVLVALMALSCFCLPGLLQLDPTTTHPAFRHQPPSAAHWFGTDGLGRDYAARVLAG
                     GQTSLLVGLVATLTCVVIGVLYGAAAGYYGGRIDEVMMRFVDFMYGIPYMFLVILIML
                     MFSESARGDPVPVFVALGLVEWLTMARVVRGQVLTLREREFVLAARLLGAGDLAIIAR
                     HIVPNVLGIVTVYATLTVPTVIILESFLSFLGLGLKLSWGQLVSEAVGVVNPVAVYWW
                     LLAFPSAFLAVTLLCLNYVGDGLRDAVDPKGH"
BASE COUNT          887 a         1566 c         1716 g          692 t
ORIGIN      
        1 catgccgtgt accgactccg atgagatcaa ttactacgtg cagtgctacc agaacgaccc
       61 ctcgacgcag gaggacaccg actttttgaa atgcctcggc atgcagggca tgaccgactc
      121 gatgggcgcg accaccatcg attgccaggc ggcgggcacg gcgtgcggag caacgccggc
      181 gggcaccggc ggcgcgggcg gtatgggcag cgccggcgcc agcgccggca gttcgagtca
      241 ctgagctcgg ctcaccgaca gagctcgcgg acggccaaat tgccgctcgg ttggcccgaa
      301 acgacgtgag tcggtccgag gtcacgccat tcggaacatg gccgctccgc gggcgcgggc
      361 tcggttgccg ccggttcact cggcgcagca tggcgatggc gagtgccctc gatgacgatc
      421 gccgggatct gcagcacggg gttcgtgtcc gctggttccg cgaccaaggt cggcgccggc
      481 ggcggaacga cgtggacggc ggcggcaggg ggctccggcg cgagcgacgg cacgctcggg
      541 tgctgtagtt tcacgctgaa agcgacgagg ccggttccag cggccaacat cgcgctgaac
      601 atccagggct gatacatcgt gacctcctgt gtccgcgagg cgcgggcgtg tggacgtgcg
      661 aacgggcacg ccctccgttc aatgcgagcg aaagtcgacg agggcgctta tccgagcaac
      721 cgacagccgt gcccgacgct tccgtcgaaa ccggcaaaga gctcggatgt gcgcaaccta
      781 accacgtcgc acgagtccgc tagtgcgagt cgaactcgcg atctgcgttt tgtaccattt
      841 cgcgctcgac gagaaagcag cgcgcgctgc ggtgatcgtg ctcgtacgca ctcggcgctt
      901 cgcgccggca gcgatccatg acgaatggac agcgtgggtg aaaccgacag cccgcaggcg
      961 gcgacgcggg tgacggtact tccccgctga gggcgggaac gggcggacgg cgcgcagcat
     1021 cgaggttcgg gaccgcggcg aggagcgcgc gcgtgtacgg gtgcaaagga cgctcgaaca
     1081 gcgcttgcgt cggggcaagc tcgacgattt gaccgaggta catgacggcc acgcgatcgg
     1141 cgatttggcg gacgacgcgc aggtcatgag tgatgaacag ataggcgagc tggaaccggt
     1201 cacgcagatc ggcgagcagg ttgatgatct gagcttgaat cgacacgtcg agtgcggaga
     1261 ccgcttcgtc gcacacgagc aagtcggggc gcgtcgcgag cgcgcgtgcg atgcagacgc
     1321 gttgcttctg cccgccggag agctcgtgcg ggtaacgcgc gcggagcgcg gggtcgatgc
     1381 cgacggacgc gagcagctcg agcactcgcg tttcgacgcc gtcacgcgag agcgtctcgt
     1441 gcagctcgac gccttcggcg acggcgctcg caatcgtgcg gcgcggatcg agactcgcat
     1501 ctggatcctg aaagaccatt tggagccggc ggcagagcgc atggcgcgcg cgcgtgccga
     1561 gcggcgccat gcgtgcgccg tcgaaccaaa cttcaccgct cgtcggcggc cgtaatccca
     1621 tgatcgcgcg cgccagcgtt gacttgccgc agccggactc gcccacgagg gcgagcgttt
     1681 caccccgccg aagctcgaga ctcaccgcgt caaccgcgcg caccgccgac tcgctgccgg
     1741 gcagcgggaa gtgcaccgac acggacttca cttcgagcag tgtgtccgag ggaaaatctt
     1801 ccattgcagc ccgacattta ccgctgaagt ctttggcacg agcagatcac gatcggcgcg
     1861 agtcgccacg agcaacgaaa gcccggcgag gccggaacgg cgaatccagg gcgaagtcgc
     1921 ttggcgaaac cggttccgcg agctaccaca agagcttcgg aggctctgat gtatcgctcg
     1981 gccgtcgtct ttggcttgta cctttctttt gcaatcgccc tgggagcagc ctgcaccacc
     2041 gggagccctg aagtctccgg ggacgacggg tttaccccca tggcttcggg cggcacgacg
     2101 ggcggaggca ccagcaacac gggaggcacg accggcggca gcttcagcac gggcggcacg
     2161 acgagtacga ccggcggaac gggtacgggc ggcaccagcg ccgcgggcgg cagaagcgcc
     2221 gcgggcggga cgacggcgac cggcggcggc gcaggtcgcg tctcgagcac cggcggcact
     2281 accgcaacgg gcgggacgac ggcgacgggc ggcaccaccg caacgggcgg catgccggcg
     2341 accgcgggca cgtccggcac ctcgggcgtg gcgtgcgaca ccgcatggat ggtaaccgcc
     2401 gacggcttcg tccgcatgcc cgcgaagggc ggcgcgtgtt ggtcgggtta cgccttcgca
     2461 ggcggggata cgaccacgac gaccatggtg acgttccccg gcggcggcac ggactttagc
     2521 aaagcgatgg gcaagctcga aatctcgggc accgtcggtg ccgcgacggc cgacaataat
     2581 tacgcgggca acgtctattt cggcttcaat gttgggcaga cggccggctc tatggctgcc
     2641 ggcacggtca aaccgacggg tacctcgctc accatcacgt gcaccgggtg cgcaacgccg
     2701 aagatgcgcg cgcagctcgt ctccagcgcc gcaacctggt gcacggacct cacgagcggc
     2761 actcccatcc tgtactcgtc gttcaagcag aagtgttacg acgctacgcc tggagcggcg
     2821 tatgcgaacg acgcgatcac gtccattcag atctcgattc caggcgcggc ggccgccgct
     2881 acgttcgacg tgacgctcgt gagcgtcacg gagcaatagc ctccgctcac tcgagctcgt
     2941 cgaccggaag cacgcaacgc cggagtcgtc cggggacgtc ttcgctgagc gctggctcgg
     3001 cgacgcggca cgcgtcgtgg acgaagcggc agcgcggcgc gaagctgcac tccgtgaagg
     3061 ggccgcggtc gagccgtggc gggaggcccg ggatggtttc gaggcggcga ccgggcacgg
     3121 cgtccaggcg cggcaagctc tgcatgagcg cgcgggtgta ggggtggagt gggcgtgcga
     3181 agagctcggc tgcgggggct agctcgacga cgcgcccggc gtacatgacg agcacccggt
     3241 cgcaagtcga ggcgacgacg ccgagatcgt gggtgatgag caaaatcgag aggccgcgtt
     3301 cgcgccggag ctcgttcaaa agctcgagga tttgggcttg gacggtcacg tcgagcgccg
     3361 tcgtcggctc gtcggcaatg atgagctccg gatcgcagag cagcgccatc gcgatcatga
     3421 cgcgctggcg catgccgccg ctgagctcgt gcgggtaact ctcgaggcgc gccgcggcgt
     3481 cggggatgcg gacgcggtcg agcagggcgc gcgctcgctc tttcgccgct cgggccccga
     3541 gtccaaggtg caagatcgcc ccttccacca gctgctcgcc aatgcggagg taggggttca
     3601 gcgccgtcat cggatcctga aagatcatgg cgatgcgggc gccgcgtacg ccgcgcatcg
     3661 ccggctccgg cagcgcgagc aggttttggc ccgcgagctc gacgcttccg tgtgtgatgc
     3721 gaccttgcgg cggcaagaga tggaggatgc tgaggctcgt cgcgctcttg cccgagccgg
     3781 actcgccgac gatgccgagg agctcgcctt tttggaggtc gaaggagacg tgatcgacgg
     3841 cacgcacgac acggtcttcg gtcctgaact ccgtcgtgag ctcgcggacg cggaggagcg
     3901 gcatcgctga atgcaacggc gcgctcatct tcctcagtgc cccttcggat cgaccgcgtc
     3961 gcgcaagccg tccccgacgt agttgaggca aagcagtgtc acggccaaaa acgcgctcgg
     4021 aaaggcgagt aaccaccaat acacggcgac gggattcacg acgccgaccg cttccgaaac
     4081 gagctgcccc cacgacagct tcaagccgag cccgagaaac gacaagaacg actcgaggat
     4141 gatgacggtc ggcaccgtca gcgtcgcgta cacggtcacg atgccgagca cgttcggcac
     4201 gatgtgccgc gcgatgatcg cgaggtcgcc cgcaccgagc agccgcgcgg cgagcacgaa
     4261 ttcccgctcg cgcagcgtga gcacctggcc gcgcacgacg cgcgccatcg tgagccactc
     4321 gaccaaaccg agcgcgacga agacgggcac cggatccccc cgcgcgctct cggaaaacat
     4381 caacatgatg aggatcacga ggaacatgta cggaatgccg tacatgaaat cgacgaagcg
     4441 catcatgacc tcgtcgatgc ggccgccgta gtaacccgcg gctgcgccgt agagcacgcc
     4501 gatgacgacg caggtgagcg tcgcgacgag tccgacgagc agcgacgttt ggccgcccgc
     4561 gagtacgcgc gccgcgtagt cgcgaccgag gccgtcggtg ccgaaccaat gtgccgccga
     4621 gggcggctga tgccgaaacg cggggtgcgt cgtcgtcgga tcgagctgca gcaagccggg
     4681 taagcagaag cagctgagcg ccatcagcgc gacgagcacg agccccacgc gagcgagtcg
     4741 attctgcttg agccgtcgcc atgcgcgagc ggcggggctg tgaggggacg ccgccaacac
     4801 tcgcgtgctc atgaacggct ccgcacgcgc ggatcgagcc acgcgtacgc gaggtcgacg
     4861 a
//
LOCUS       DATIML010000768         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_161673, whole genome shotgun sequence.
ACCESSION   DATIML010000768 DATIML010000000
VERSION     DATIML010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161673"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1660
                     /locus_tag="VLJ38_13220"
     CDS             <1..>1660
                     /locus_tag="VLJ38_13220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HSU40530.1"
                     /translation="LVGTTSVEKSGAIARILGKKGIAHHVLNAKHHENEAFIVAQAGR
                     KGAITVSTNMAGRGTDILLGGNPEMLARLEIKQKGVTAADDSPEFKELVERHERECKI
                     EHDEVIELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGYSKFYLSLEDDLMRIFAGD
                     RVKSLMDRMGMPDDEPIEHPLVTRSIENAQRKVEERNFDVRKNLLEYDDVMNAQRKTV
                     YSLRQQLLAGRYVPEELDEAGKATGEGREIAVDPEILDKVSGPIGALVGMFCDPPVGI
                     TKEDGQTKYPTRETLAKVEKLVELEALQHEVYQLWGVRLDVEERRQRTPASVYDELIE
                     MVPRGLSEQRERVLDLTDRVVAAMVEESCAEGKPPEDWDFKGLHEGFQEHFQAKLSEG
                     VEELGEQDSVMKRAYERAEEVYREKEKELGVEIALRLFRHIYVEGIDEAWVDHLSNME
                     HLRDGIGLRGYGQRDPKNEYKKEGFDLFLNMMAKVSSNVLVKFFEARVQRTDEVAARE
                     QEAERRYQEELAQVVAQHPSAETEDPAAALNQLREQAAAVPQPTR"
BASE COUNT          352 a          537 c          554 g          217 t
ORIGIN      
        1 ctcgtcggca cgaccagcgt cgaaaagagc ggcgccatcg cgcggatttt gggcaaaaag
       61 ggcatcgcgc accacgtcct caacgccaag caccacgaga acgaagcctt catcgtcgcg
      121 caggcgggca ggaagggcgc catcacggtg tccaccaaca tggccggccg cggcacggac
      181 atcttgctcg gcggtaaccc cgagatgctc gcgcgcctcg agatcaagca gaagggcgtc
      241 acggccgcgg acgacagccc cgagttcaag gagctcgtcg agcggcacga acgcgagtgc
      301 aagatcgagc acgacgaggt gatcgagctc ggcggtttgc acatcatcgg caccgagcgc
      361 cacgagtcgc gccgcatcga caaccagctg cgcggccgcg ccggccgcca gggcgacccc
      421 ggctacagca agttctacct ctcgctcgaa gacgacctca tgcgcatctt cgcgggcgac
      481 cgcgtgaaga gcttgatgga tcgcatgggc atgcccgacg acgagcccat cgagcacccg
      541 ctcgtcacgc gcagcatcga aaacgcgcag cgcaaagtcg aagagcgcaa cttcgacgtg
      601 cgcaagaacc tgctcgagta cgacgacgtg atgaacgcgc agagaaagac cgtgtactct
      661 ctgcgccagc agctgctcgc gggccgctac gttccggaag agctcgacga agccggcaag
      721 gctacggggg aaggccgcga aatcgcggtc gatccggaga ttttggacaa ggtctcgggc
      781 cccatcggcg cgctcgtcgg catgttctgc gatccgcccg tcgggatcac caaagaggac
      841 ggtcagacca agtacccgac gcgcgaaacc ctcgccaagg tcgagaagct ggtggagctc
      901 gaagcgctgc agcacgaggt gtatcagctc tggggcgtcc ggctcgatgt cgaggagcgc
      961 cgccagcgca cgccggcgtc ggtctacgac gagctcatcg agatggtgcc gcgcggcttg
     1021 tccgagcagc gcgagcgcgt gctcgatctc accgaccgcg tcgtcgccgc gatggtcgaa
     1081 gagagctgcg ccgagggcaa gccgccggaa gactgggact tcaagggcct gcacgaaggc
     1141 ttccaggagc acttccaggc gaagctgtcg gaaggcgtcg aagagctcgg cgagcaggac
     1201 tccgtgatga agcgcgccta cgagcgcgcc gaagaggtgt accgcgagaa ggagaaggag
     1261 ctcggcgtgg aaatcgcctt gcgcctgttc cgccacatct acgtcgaggg catcgacgag
     1321 gcgtgggtcg atcacctgtc gaacatggag cacttgcgcg acggcatcgg cctgcgcggc
     1381 tacggccagc gcgatccgaa gaacgagtac aaaaaagagg gtttcgacct cttcctcaac
     1441 atgatggcga aggtctcgag caacgtgctc gtgaagttct tcgaggcgcg cgtgcagcgc
     1501 acggacgaag tcgccgcgcg cgagcaggaa gccgagcggc gctaccaaga ggagctcgcg
     1561 caagtcgtcg cgcagcaccc gagcgccgag accgaagatc ccgccgccgc gctcaatcaa
     1621 ctgcgcgagc aagcggccgc cgtgccgcaa ccgacccgcc
//
LOCUS       DATIML010000769         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_742218, whole genome shotgun sequence.
ACCESSION   DATIML010000769 DATIML010000000
VERSION     DATIML010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_742218"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VLJ38_13225"
     CDS             <1..446
                     /locus_tag="VLJ38_13225"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU40531.1"
                     /translation="AWGKKGERWLDVNLSKQTLVAYDGERPVFATLVSSGEAGLDDAD
                     KTTATKRGIFRIHTKHVSTTMSSDEVGEEFELRDVPYVQYFEQGYALHGAYWHDRFGT
                     PKSHGCVNLSPEDARRLFFFTEPALPTGWHGVIKALTGTIVFIHA"
     gene            complement(468..1070)
                     /locus_tag="VLJ38_13230"
     CDS             complement(468..1070)
                     /locus_tag="VLJ38_13230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40532.1"
                     /translation="MRSALPLSLACLCLLAACSNGDSGAPVSPGNVFLEITALHARGG
                     DVWLPPRAPDPADPSDEGSQGDPEPILIGCDRRLGVDARLEYFSLRAPDACGGNLQCG
                     YLVIEIDPSDAGAAASAYAAASSLFVDLGDLDHAGKLQGEHIIRPRLSQVDGKPFTHP
                     YASTPQDLTVTFTSDTCNVGGSGGGSGGPSSPNAGAGGRT"
     gene            complement(1093..1563)
                     /locus_tag="VLJ38_13235"
     CDS             complement(1093..1563)
                     /locus_tag="VLJ38_13235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40533.1"
                     /translation="MDLLIPDGVGRRVEFVPKTAFAEYVELPELRRELRITLASYSLS
                     CDRYVPPGPDDVLLVLTLTAPATEPFHPGTYPLETAEMPDAGPTKRAKGFAVARQGGR
                     GFDFPSGGAVELRSVEFTPGGLVGGMLALEFPGDGSRPPAGAHGKFEAHLCRGE"
     gene            complement(1620..>2392)
                     /locus_tag="VLJ38_13240"
     CDS             complement(1620..>2392)
                     /locus_tag="VLJ38_13240"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU40534.1"
                     /translation="DYNATAARSVSQEEFFKLFREEASALIMLPNHANLARFVTFDLA
                     ARPKPILVMELITGLSMDRLIRSRSLTMDRAFRYLDGIAAGLETMHGVGVGHLDIKPS
                     NVIMRDGETPVLVDFGLSGRHLRPGCGTLEFCAPEVLGIHDPSFHPAPQGADIYAFGC
                     LAYELLAAETLFQAEGETAILSLHVQHDGWPERVARLGRDSVLADLGKFIASCLRRDP
                     RQRPTAAQTRAALGPLAKKYKNVQWPLPLPAARAQRAG"
BASE COUNT          419 a          772 c          845 g          356 t
ORIGIN      
        1 ccgcctgggg caagaagggc gagcgctggc tcgacgtgaa cctgagcaag cagacgctcg
       61 tcgcgtacga cggcgagcgg cccgtgttcg cgacgctcgt ctcgagcggc gaggcgggcc
      121 tcgacgacgc cgacaaaacc acggcaacca agcgcggcat cttccgcatc cacacgaagc
      181 acgtctccac cacgatgagc tcggacgaag tcggcgagga attcgagctg cgcgacgtgc
      241 cgtacgtgca gtacttcgag caaggttacg ccctgcacgg cgcctactgg cacgatcgct
      301 tcggtacccc gaagagtcac ggctgcgtga atctgtcgcc cgaggatgcg cggcggctct
      361 tcttctttac cgagcctgcg ctcccgaccg gctggcatgg cgtgatcaag gcgctcacgg
      421 gcaccatcgt cttcattcac gcctgatctg cagcccgagc gctgcggcta agtcctgcca
      481 cccgctcccg cgttcggcga cgacggcccg ccagagccgc cgccagagcc gccgacattg
      541 caggtgtcgg aggtgaacgt gacggtgaga tcttgaggcg tggaggcgta cgggtgcgtg
      601 aacggcttgc cgtccacctg cgagaggcgc ggacggatga tgtgctcacc ttgcagcttg
      661 cccgcgtgat cgagatctcc gagatcgacg aagaggctcg aggccgcggc gtaagcgctc
      721 gccgcggccc ccgcgtccga gggatcgatc tcgatcacga gatagccgca ctgcagattg
      781 ccgccgcacg cgtcgggcgc ccgcagcgag aaatactcta gccgcgcgtc gacgccgagg
      841 cggcgatcgc acccgatcag gatgggctcg ggatcgccct gagagccctc gtcgctcggg
      901 tccgccggat cgggtgcacg cggaggcagc cacacgtcgc cgccgcgggc gtggagcgcc
      961 gtgatctcga ggaacacgtt gcccgggctc accggcgcgc ccgagtcgcc gttactgcac
     1021 gccgcgagca agcacagaca agcaagtgag agcgggaggg cggagcgcat gagggcaggg
     1081 tgctatcacg acttattccc cgcgacacag gtgcgcctcg aacttgccgt gcgcgcctgc
     1141 aggcggacgg ctgccgtcac cgggaaactc gagggcgagc atgccgccca cgagcccgcc
     1201 tggcgtaaat tccacgctcc ggagctcgac tgcgcctccg ctcggaaaat cgaagccgcg
     1261 gccgccttgg cgtgccacgg caaagccctt ggcgcgcttg gtggggcccg catcgggcat
     1321 ttccgcagtc tcgagcgggt aggtgcctgg atgaaagggc tcggtggcgg gggccgtcag
     1381 cgtcagcacg agcagtacgt cgtccggtcc cgggggtacg taacgatcgc aagacagcga
     1441 atagctcgcg agcgtgatgc gaagctcgcg ccggagctcg ggcagctcga cgtactcggc
     1501 gaaagcggtt ttcgggacga actcgacgcg gcggcccaca ccgtcgggga tgagcagatc
     1561 cacgccgttg ccggtgtttc cggcgcggca ggccgcgagg aaaagtgagc aggcgagggt
     1621 caaccggcgc gttgagcgcg cgcggcgggc agcggcaaag gccattggac gttcttgtac
     1681 ttcttcgcga gcggaccgag cgcggcacgt gtttgcgccg ccgtagggcg ctgtcgtgga
     1741 tcgcggcgca ggcaagatgc aatgaatttc ccgagatcgg ccaggacgct gtcccggccg
     1801 agccgggcca cgcgctcggg ccaaccgtcg tgctgcacgt ggagcgacaa aatcgcggtt
     1861 tcgccctcgg cttgaaagag cgtctcggcg gcgagcagct cgtacgccag gcagccgaag
     1921 gcgtaaatat cggcgccctg gggcgccggg tggaacgagg ggtcgtgaat gccgagcacc
     1981 tcgggcgcgc agaactcgag cgtgccgcaa cccggtcgta ggtgacgccc gctcagtccg
     2041 aagtccacga gcaccggggt ctcgccgtcg cgcatgatga cgttcgaggg cttgatgtcg
     2101 aggtggccga ctccgacgcc gtgcatcgtc tcgagaccgg cagcgatacc gtccaggtag
     2161 cgaaacgcgc gatccatcgt gagcgagcgg cttcggatca agcgatccat cgacagcccg
     2221 gtgatgagct ccatcacgag aatcggcttt ggccgcgcgg cgagatcgaa cgtgacgaag
     2281 cgcgcgaggt tcgcgtggtt gggcagcatg atcagcgcgg aggcctcttc gcggaacagc
     2341 ttgaagaact cctcctgcga gacggagcgc gcggccgtcg cgttgtagtc cg
//
LOCUS       DATIML010000770         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5649915, whole genome shotgun sequence.
ACCESSION   DATIML010000770 DATIML010000000
VERSION     DATIML010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5649915"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="VLJ38_13245"
     CDS             <1..591
                     /locus_tag="VLJ38_13245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU40535.1"
                     /translation="QRALRSGSVRVAGDDYRATREHIRTRRVRLLPEAPLKNACVSHM
                     TLAHNIAFRDYDRPPFTLARWALRPRAFKKRAEEAIRAFRIRTPGPLSPIGQLSGGNV
                     QRAVLARELAGEVRVLIAANPCFGLDFGAVAEIRSRIMDARNAGTAVLLISADLEEIF
                     ALSDRILVMSEGRIVHETPAATADVREIGRHMAGHA"
     gene            588..956
                     /locus_tag="VLJ38_13250"
     CDS             588..956
                     /locus_tag="VLJ38_13250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSU40536.1"
                     /translation="MKHDEGASSPALPRLVARALELATRGGDWQSLRHGVDILRLCGN
                     AESGPSVALLRYQPGAHVPAHRHLGFEVIYVLSGAQSDERGTYGAGTLVVNREGGAHS
                     VESADGCLVLIMWERPIEFV"
     gene            1221..>2305
                     /gene="urtA"
                     /locus_tag="VLJ38_13255"
     CDS             1221..>2305
                     /gene="urtA"
                     /locus_tag="VLJ38_13255"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033219 - urea binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter substrate-binding protein"
                     /protein_id="HSU40537.1"
                     /translation="MKTWLKMTVSVSAALLGACEGPGKEAPAPAPAASSSAAAAAPAA
                     AAPAAAPKAAETGPIKVGILHSLSGTMAISETSLKDVALMTIESINKAGGVLGRQLQP
                     VVVDPASNWPLFAEKARELIQKENVAVTFGCWTSVSRKSVLPVYEELNGLLFYPVQYE
                     GEESSYNVFYTGAAPNQQAIPAVEYLMSPKGGGAKRWVLLGTDYVYPRTTNKILRYFL
                     HEKGVKDDDILEKYTPFGHSDYQTIVAEVKKFAAGKPTAVVSTINGDSNVPFYKELAN
                     QGLKATDIPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDTPINKKFIKEWHAYTK
                     NDKRVTNDPMEAHVIGFNMWVKAVEKAG"
BASE COUNT          427 a          769 c          752 g          357 t
ORIGIN      
        1 cagcgcgcgc tacgcagcgg cagtgtgcgc gtcgcgggcg acgactaccg tgcgacccgc
       61 gaacacatcc gcacccgccg cgtccgactc ttgcccgaag cgccgctcaa aaacgcgtgc
      121 gtctcgcaca tgacgctcgc gcacaacatc gcgttccgcg actacgaccg gccgcccttc
      181 acgctggcgc gctgggcgct ccggccgcgc gccttcaaaa aacgcgccga ggaggcgatt
      241 cgggccttcc gcattcgcac tccgggcccg ctctcgccga tcgggcagct ttcgggcggg
      301 aacgtgcagc gcgccgtact cgcgcgcgag ctcgccggcg aagtacgcgt gctcatcgcc
      361 gccaatccct gcttcgggct cgacttcggc gccgtggcgg agatacgctc gcggatcatg
      421 gacgcgcgaa acgccggtac ggcggtgctc ttgatcagcg ccgatctcga agagatcttc
      481 gcgctctccg atcgcatcct cgtgatgagc gagggccgca tcgtccatga aacgccggcg
      541 gcgacggccg atgtgcgtga aatcggccgc cacatggccg gccacgcgtg aagcacgacg
      601 agggggcgag ctcgcccgca ttgccgcgcc tggtcgctcg cgcgctcgag ctcgctacgc
      661 gcggcggcga ttggcaatcg ctgcgccacg gcgtcgatat cctgcgcttg tgcggcaacg
      721 cggagagcgg cccgagcgtc gcgctgctcc gttatcagcc gggagcgcat gtcccagcgc
      781 accggcacct cgggttcgag gtgatttacg tgctctccgg cgcgcaaagc gacgaacgcg
      841 ggacgtacgg cgccggcacg ctcgtcgtca atcgcgaagg cggcgcccac agcgtcgaga
      901 gcgccgacgg ctgcctcgtg ctcatcatgt gggaacggcc gatcgagttc gtctgagctc
      961 gcgttttctc cgttcgtgag ggctcgtggg gtagcgcggc gacggcgcgc tacgacttgc
     1021 cgctgccgtg gcctgggggc gaacccagcg cgccggcaag atccgggccg gggcggtttg
     1081 atacgcggtt accaaggggc cgcgtcgacg aaagaaatcg gaaacaacga acgagggaaa
     1141 cccgagtgct gtgaccgagc gacgtcgatt gcccccttca cgcggaaggg gtcgcggcca
     1201 gacggtccag ggagacactc atgaaaactt ggttaaagat gacggtgtca gtgagcgcgg
     1261 cgctgctcgg cgcgtgcgaa gggccgggta aagaagcacc cgcgcccgca ccggccgctt
     1321 cgagctcggc ggcagcagcc gctccggccg cagcggcccc cgcggcagct ccgaaggctg
     1381 ccgaaaccgg cccgatcaag gtcggcattc tgcattcgct ctcgggcacg atggccatca
     1441 gcgaaacgtc cctcaaagac gtggcgctca tgacgatcga gagcatcaac aaggccggcg
     1501 gcgtcctcgg ccgccagctc cagccggtcg tcgtggatcc ggcgtccaac tggccgctct
     1561 tcgccgagaa ggcgcgcgag ctgattcaga aggaaaacgt cgccgtcacg ttcggttgct
     1621 ggacctcggt gtcgcgcaaa tccgtgctgc ccgtctacga agagctgaac ggcctgctct
     1681 tttaccccgt gcaatacgaa ggtgaagagt cgtcgtacaa cgtgttttac acgggcgcgg
     1741 cgccgaacca gcaggcgatc cccgcggtcg agtacctgat gagcccgaag ggcggcggcg
     1801 cgaagcgctg ggtcctgctc ggcaccgatt acgtctatcc ccgcaccacc aacaagatcc
     1861 ttcgctactt cttgcacgag aagggcgtga aggacgacga catcctcgag aaatacacgc
     1921 cgttcggaca ttccgattac caaacgatcg tcgccgaggt gaagaagttc gccgccggca
     1981 agccgaccgc cgtcgtttcg accatcaacg gcgactcgaa cgtgccgttc tacaaagagc
     2041 tcgccaatca gggtctcaag gcgacggaca ttcccgtggt cgcgttctcc gtcggcgagg
     2101 aagagctccg cggcatcgac acgaagccgc tcgtcggcca cctcgcggcg tggaactact
     2161 ttgaatcggt cgatacgccg atcaacaaga agttcatcaa ggaatggcac gcctatacca
     2221 agaacgacaa gcgcgtgacc aacgacccga tggaagccca tgtcatcggg ttcaacatgt
     2281 gggtcaaggc ggtcgagaag gccgg
//
LOCUS       DATIML010000771         3368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3628743, whole genome shotgun sequence.
ACCESSION   DATIML010000771 DATIML010000000
VERSION     DATIML010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3628743"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VLJ38_13260"
     CDS             <1..507
                     /locus_tag="VLJ38_13260"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HSU40538.1"
                     /translation="PKLIVPVAQLLGDTEMDQLINQAHIKNPGDGVAFHFHQDSYHRR
                     FGSALFSDVNGRGSFVQALTAVDAMTPENGGLWVVPKSHLAGHIPTSDGRLPDGSFDR
                     AAAVPLELAAGDTVLFGPFTVHGSGANAGRTPRRVFINGFCSPGANRREYPGAGTGFR
                     VRALHRAA"
     gene            595..735
                     /locus_tag="VLJ38_13265"
     CDS             595..735
                     /locus_tag="VLJ38_13265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40539.1"
                     /translation="MEHGLVTLAKIVGTLLFGMGVVPWIFLLSPGDSGEPAAEPDDAD
                     HH"
     gene            789..1619
                     /locus_tag="VLJ38_13270"
     CDS             789..1619
                     /locus_tag="VLJ38_13270"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HSU40540.1"
                     /translation="MTIARPMHGSHVRWLAALAFAAALGCSKKEAPANLAAVSSASLE
                     APKSASSGAVIVSVDTPTSSVKFLMDSPLEKIDGDAPGSASGELALDLGDLSKSTGLV
                     RIDLDKLSLYQQKRPDGSGDYQARTKNPLQNEHARDWLQLVPHEGEVTPEQAAQNRTA
                     EFRIEKVEPAASSVLALSGPERKVVATVSGTLRLHGRQAPESAKVELDFHFTGDHFDS
                     VGVKTLEPFSVDLEKFEIHPRDGAGKLVKSITDALSSTLKGKVKSEAPVSIELTAKPK
                     "
     gene            complement(1675..>3368)
                     /locus_tag="VLJ38_13275"
     CDS             complement(1675..>3368)
                     /locus_tag="VLJ38_13275"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSU40541.1"
                     /translation="DSPLTAAFRNTHFDWALAGPAPLVAAGELGVVPGPVPPIPAPGT
                     HIESGADLWTLAQAPPPSVEPWLSNSSGTFTARPVTPGRVHAVARHPDYVEGSSSSVV
                     LAPGGEAHVKIVLLAGGTLAGRVLDDRGFPVENAELELASAHVSVTRTALSARDGGFE
                     LGGIPAEVTLSVRRPDGTRRIALQRDVKVPAGEKTTLELVLPAPREDVSFRVADATDT
                     PVELASIGVLSLDPATPLRETLFTEADGSARIADARGLPLRLVVEAPGHPRKNVSVEK
                     APELVRVTLEQGVRVEGEITAVRGRSFVAGALVTLVTNGVRRTSRTDAEGRYRFADVA
                     AGPVHLSITHADYAPAALEATVTPTGRDDRAFELPSVDLSEPGGAEGDVVDRDGNAVA
                     GARVSVGEAPAYLPAGALPPGVTLTDSSGHFKLDGVAEGHQTLAAVSALSGHGRVAVD
                     IRAGRVADRVHIVLSPNAAEEALDGGNVAVTLGERGSGAALEVVVVAVAPSSEAERAG
                     VAAGDVVVAIDGVHPTNMGDARRRLAGRLGTDIVLELTRGTGRDVLRVAREAVRD"
BASE COUNT          525 a         1220 c         1142 g          481 t
ORIGIN      
        1 cccaagctca tcgtgcccgt ggcgcagctc ctcggcgaca cggaaatgga tcagctcatc
       61 aaccaggcgc acatcaaaaa tccgggcgac ggcgtcgcgt ttcacttcca ccaagacagc
      121 taccaccgcc gcttcggcag cgcgctcttc agcgacgtga acgggcgcgg cagcttcgtg
      181 caggcgctca cggccgtcga tgccatgacg ccggaaaacg gcgggctctg ggtcgtgccg
      241 aagagccacc tcgccgggca cattccgacg agcgacgggc gcttgccgga cggctcgttc
      301 gatcgcgccg cggccgtgcc gctcgagctc gccgcggggg acacggtgct gttcggcccg
      361 ttcacggtgc acggtagcgg cgccaacgca ggcaggacgc cacgacgcgt tttcatcaat
      421 ggcttctgct cgcccggcgc gaaccgccgc gagtatcccg gcgcggggac gggttttcgc
      481 gtgcgcgcgt tgcaccgcgc ggcctagcgg ttcgtcgcgg cgcggccgca gcggatctgc
      541 acaggggaac agccttccca gccgtgggct ctggggctat ggtccggccc gtcgatggaa
      601 cacggactcg tcacgctcgc caagatcgtc ggcaccctgc ttttcggcat gggggtcgtc
      661 ccctggatct tcttgctctc gcccggcgac tccggcgagc cggcagcgga gccggacgac
      721 gccgatcatc actgagctct cgcagaactg aaaccgctcg ggggccacag cgtaaaggag
      781 ggacaccgat gaccatcgcc cgtcccatgc acggctcgca cgtccgttgg ctcgccgcgc
      841 tcgcgttcgc cgcggcgctc ggctgcagta agaaagaggc acccgccaac ctcgccgccg
      901 tctcgagcgc gtcgctcgaa gcgccgaaga gcgcgtcgtc cggcgccgtg atcgtcagcg
      961 tcgacacgcc cacgagctcg gtgaagttct tgatggactc gccgctcgaa aagatcgacg
     1021 gcgacgcgcc cggctccgcg agtggcgagc tcgcgctcga tctcggcgat ttgtcgaagt
     1081 cgaccggcct cgtgcgcatc gacctcgaca agctctcgct ctaccaacag aagcgccccg
     1141 acggcagcgg cgactaccag gcgcgcacca aaaatcccct gcaaaacgag cacgcacgcg
     1201 actggctgca gctcgtcccg cacgaggggg aagtcacgcc cgagcaggcc gcgcagaatc
     1261 ggacggctga gtttcgcatc gagaaggtcg agcccgccgc aagcagcgtg ctcgcgctga
     1321 gcggtcccga acgcaaagtc gtcgccacgg tctctggaac gctccggctc cacggacgcc
     1381 aggcgccgga gagcgccaag gtcgaactcg acttccactt cacgggcgat catttcgact
     1441 ccgtgggggt gaagacgctc gagccgttca gtgtggatct cgaaaaattc gagattcatc
     1501 cgcgcgacgg cgccggcaag ctcgtcaaga gcatcaccga cgccctgtcc tcgacgctca
     1561 agggcaaggt caagagcgag gcacccgtct cgatcgagct cacggcgaag cccaagtaga
     1621 cgcgttcccg ctcgcgccgc tcgtgatccg gccttcctgg accgtcgttt cttcctaatc
     1681 gcgcacggct tcgcgcgcca cgcgcaacac gtcgcgaccg gtgccgcgcg tgagctcgag
     1741 tacgatgtcc gtgccgagcc gccccgcgag ccgccgccga gcgtcgccca tgttcgtcgg
     1801 gtgcacgccg tcgatcgcca ccacgacgtc gcccgccgcg acgcccgcgc gttcggcttc
     1861 gctcgacggc gcgaccgcca cgacgacgac ctcgagcgcg gcgccgctcc cgcgttcacc
     1921 gagcgtcacg gcgacgttcc cgccgtcgag cgcctcttcc gcagcattcg gcgagagcac
     1981 gatgtgcacg cgatcggcga cgcgtcccgc gcggatgtcg accgcgacac gcccatgccc
     2041 cgacagcgcc gagacggcag cgagcgtctg gtgcccctcg gcgacgccat cgagcttgaa
     2101 atggccgctc gaatccgtca gcgtcacgcc gggcggcagc gctccagccg gcaaatacgc
     2161 gggcgcctcg cccaccgaga cgcgcgcgcc tgcgacggca ttgccgtcac gatcgaccac
     2221 gtcgccttcg gcgccgccag gctcgctcaa atcgacggag gggagctcga acgcccgatc
     2281 gtcgcgtccc gtcggcgtga ccgtggcctc gagcgcggcg ggcgcgtagt cggcgtgcgt
     2341 gatgctcaga tggacgggcc cggccgctac gtcggcgaag cgatagcggc cctcggcgtc
     2401 ggtgcgcgac gtgcggcgca cgccgttcgt cacgagcgtg acgagcgcgc ccgcgacgaa
     2461 gctccgcccg cgcacggccg tgatttcgcc ttcgacgcgc acgccttgct ccagcgtgac
     2521 gcggacgagc tcgggcgctt tctctacgct cacgttcttg cgtgggtgtc ccggcgcttc
     2581 caccacgagg cgcagcggca ggccgcgcgc gtcggcgatt cgtgcggagc cgtcggcttc
     2641 ggtgaagagc gtctcgcgga gcggcgtcgc cggatcgagc gaaagcaccc cgatgctcgc
     2701 gagctcgacg ggggtgtcgg tcgcgtccgc gacgcgaaag cttacgtctt cacgcggcgc
     2761 gggcagcacg agctcgagcg tcgtcttttc gccggcgggc actttgacgt cgcgctggag
     2821 ggcgatcctt cgcgtgccgt ccgggcgccg caccgagagc gtcacttccg ccggaatacc
     2881 gccgagctcg aagccgccgt cacgcgcgct gagggccgtc cgcgtgacgg agacgtgcgc
     2941 gctcgcgagc tcgagctcgg cgttttcgac cgggaacccg cgatcgtcga ggacgcggcc
     3001 cgcgagcgta ccgcccgcga gcaacacgat cttcacgtgg gcctcgccac ctggggcgag
     3061 cacgacgctc gagctcgagc cttcgacgta gtcgggatgg cgcgccacgg catgcacgcg
     3121 accgggcgtt acgggccgcg ccgtgaaggt ccccgaggaa ttcgacagcc aaggctcgac
     3181 gctcggcggc ggcgcttggg cgagcgtcca gagatcggcg ccggactcga tgtgggtgcc
     3241 cggcgcggga atgggcggca ccggacccgg cacgacgccg agctcacccg cggcgacgag
     3301 cggcgccggc cccgccaacg cccagtcgaa gtgcgtgttg cggaacgccg ccgtgagcgg
     3361 tgaatccg
//
LOCUS       DATIML010000772         2681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_451754, whole genome shotgun sequence.
ACCESSION   DATIML010000772 DATIML010000000
VERSION     DATIML010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451754"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1233
                     /gene="lysA"
                     /locus_tag="VLJ38_13280"
     CDS             <1..1233
                     /gene="lysA"
                     /locus_tag="VLJ38_13280"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR01048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HSU40542.1"
                     /translation="LTVSGTPLGALLGPLFEASRSGTPAYVYDLDGLDAGARTLEASF
                     GSAAHVTAYAVKANTAGTILRTFARAGTGADVVSGAELEVALACGIEPRRIVMSGVAK
                     TDAELDLAIAHDILAVQVESLEEIERLAARARAAGRRARLGIRVKPGVTIDSHAHVAT
                     GHDAAKFGVAKSELGLAWERIDAHPELAAVGVSSHVGSMLREVDPYLTAARVVCEVVK
                     ARLATGHTLEYADFGGGYGIDYSGGSVPAPAVFVRAALELLRAEGLSTLKLVVEPGRS
                     LVAPFGVLVARVVQTKESAERRWVMLDAGMNDLIRPALYGAKHRVELLAAAPSEPEWR
                     VVGPVCESSDDFGAHPLGQAPSGLVVLRDAGAYGFVLASEYNGRPLPAEVFVKDGSVV
                     HVSSSPGRERWIARRLEA"
     gene            complement(1294..2619)
                     /locus_tag="VLJ38_13285"
     CDS             complement(1294..2619)
                     /locus_tag="VLJ38_13285"
                     /inference="COORDINATES: protein motif:HMM:NF019274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Kazal-type serine protease inhibitor
                     domain-containing protein"
                     /protein_id="HSU40543.1"
                     /translation="MKVNTSKGWTNRYALLALVAWAPLGLGAKGCDHAVVGDDGHCTT
                     DCPSGEAGADTGGTVGTGGDTGTGGSGTSGDAGKGGTSGTSGSAGKGGSSATGGSSAT
                     GGSSATGGSSGSVGQGGSSGTTTCGGLQGLSCDKGEYCDFAPETLCGAADQTGTCQPM
                     PQICDTLYAPVCGCDGQTYGNDCEAARAGVSVATKGECAPNGVTCGGSTFIECDSGQY
                     CDYPPDAICGRADGPGTCQPKPDGCTTDYAPVCGCDGQTYGNACTAHMAGVSVDHEGE
                     CVQVGTTCGGRSGTQCPAEQFCSFALAAQCGRGDQTGTCQPQPQVCDDIYQPVCGCDG
                     NTYPNACNANGAGTSVLASGACTDTGATCGGLRGSQCSAGEYCDFPIATQCGSADQTG
                     KCRSSSVACPQITGPSLEVCGCDGKTYGSSCFAQQAGVAVASLGACPAQ"
BASE COUNT          365 a          964 c          913 g          439 t
ORIGIN      
        1 ctcaccgttt ccggcacgcc gctcggggcg ctactcgggc cacttttcga ggcgtctcgc
       61 agcggtacgc ccgcctacgt ttacgatctc gacgggctcg atgccggagc ccgcacgctc
      121 gaggcaagct tcggctccgc ggcacacgtc actgcgtacg ccgtgaaggc gaacaccgcg
      181 ggcacgatcc tacgcacctt cgcgcgggcc ggcacgggcg ccgacgtcgt ctcgggcgcc
      241 gagctcgaag tggcgctcgc ctgcggcatc gagccgcgcc gcatcgtgat gagcggcgtt
      301 gccaagacgg acgctgagct cgatctcgcg atcgcgcacg acattctggc cgtgcaagtc
      361 gaaagcctcg aggaaatcga gcggctcgcg gcgcgggccc gggctgcggg caggcgcgca
      421 cggctcggca tccgcgtgaa gccgggcgtc acgatcgatt cgcacgccca cgtagcgacg
      481 gggcacgacg ccgccaagtt cggcgtcgcc aagagcgagc tcggccttgc gtgggagcgc
      541 atcgacgcgc atcccgagct cgccgccgtg ggcgtgtcct cgcacgtcgg ctcgatgctg
      601 cgcgaggtgg acccgtactt gacggcggcg cgcgtcgtct gtgaggtcgt caaagcacgg
      661 ctcgcgacgg gtcacacgct cgagtacgcc gacttcggtg gcggctacgg tatcgactac
      721 agcggcggca gcgtgccggc gcccgccgtg ttcgtgcgag cggcgctcga gctcttgcgc
      781 gccgaaggac tctcgacgct caagctcgtg gtcgagcccg gccgttcgct cgtcgcgccg
      841 ttcggcgtgc tcgtggcgcg cgtcgtgcag accaaggaga gcgccgagcg gcgctgggtc
      901 atgctcgacg caggcatgaa cgatttgatt cgtcccgcgc tttacggcgc caaacatcgc
      961 gtagagctgc tcgcggccgc tccgagcgag cccgagtggc gcgtggtcgg tcccgtgtgt
     1021 gaaagctcgg acgacttcgg cgcgcacccg ctcggacaag cgccgtcggg actcgtcgta
     1081 ctgcgagacg ccggcgcgta cggcttcgtg ctcgcgagcg aatacaacgg ccgcccgttg
     1141 ccggccgagg tgttcgtgaa ggacggcagc gtcgtgcacg tgagctcgag cccgggtcgc
     1201 gagcgctgga tcgcgcggcg gctcgaagct taacgagcta gcggcgcccg acccctcacg
     1261 gtcgagcgcc gctttttgag tcgcgcgtgg tcgctactgc gccgggcagg cacccaggga
     1321 cgctaccgcg acgccggctt gctgggcgaa gcacgagctg ccgtacgtct tgccatcgca
     1381 gccgcaaacc tcgagcgacg ggccggtgat ttgtgggcag gcgacgctag aggacctgca
     1441 cttcccggtc tgatctgcgg agccacactg ggtcgcgatt gggaaatcgc agtattcgcc
     1501 ggcgctgcac tggctgccgc gcagaccgcc gcacgtcgcg cccgtgtccg tgcacgcgcc
     1561 gctcgccaac acggaggtgc cggcgccgtt cgcattgcat gcgttcggat aggtgttgcc
     1621 gtcgcagcca cacaccggtt gataaatgtc gtcgcacacc tgcggctgcg gctggcacgt
     1681 gcccgtctgg tcgccgcggc cgcactgggc ggcgagcgcg aagctgcaga actgctccgc
     1741 ggggcactgc gtgcctgaac ggccgccgca cgtcgtgcct acctgaacgc actcgccctc
     1801 gtggtcgacg gagactcccg ccatgtgtgc cgtgcaggcg tttccgtacg tctggccgtc
     1861 gcagccgcac acgggagcgt agtccgtcgt gcagccgtcg ggtttgggct gacaggtccc
     1921 cggtccgtcg gcacgaccgc agatggcgtc cggcgggtag tcgcagtatt gcccgctgtc
     1981 acattcgatg aaggtgctac cgccgcacgt cacaccgttc ggcgcgcact cgcccttggt
     2041 ggccaccgat acgccggcgc gcgcggcttc gcagtcgttg ccgtacgtct ggccgtcgca
     2101 gccgcacacg ggcgcgtaca gcgtgtcgca gatttgcggc atcggctggc aagtccccgt
     2161 ctggtccgca gcgccgcaca gcgtctcggg cgcgaaatcg cagtattcgc ccttgtcgca
     2221 gctcaagcct tggaggccgc cgcacgtcgt cgtcccggag cttccaccct gaccgacgct
     2281 tcccgacgag ccgcccgtcg cggacgagcc gcccgttgcg gacgagccgc ccgtcgcgga
     2341 cgagccgccc ttgcccgcgc tgccgctcgt tcctgacgtc ccgccctttc cggcgtcgcc
     2401 gctcgtccca gagccgccag tacccgtgtc gccaccggtt cctaccgtac cacccgtatc
     2461 ggcaccggct tcaccgctcg gacagtccgt cgtgcagtgg ccgtcgtcgc cgaccacggc
     2521 gtggtcgcag cccttcgccc cgagcccgag cggcgcccac gcgacgagcg cgagcagcgc
     2581 gtagcggttc gtccacccct tcgatgtatt cactttcatg gtgtcacctc tttctcccta
     2641 attcgcgcga gcgcgcggtc gcgctcgggc gccaagtgcc c
//
LOCUS       DATIML010000773         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3629152, whole genome shotgun sequence.
ACCESSION   DATIML010000773 DATIML010000000
VERSION     DATIML010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3629152"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VLJ38_13290"
     CDS             complement(<1..597)
                     /locus_tag="VLJ38_13290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40544.1"
                     /translation="MSAPGVTPDPIHSPLCPFRVRLRVRLRHLEPSNMRFIELCCLVP
                     LSLLVLACQSTHSAAKDAPPEKSEAKAKSEKGEDDKDAKEEKMKKKQRELDDARLQLT
                     IARLETEAADRKEKDELQDAEYGMEKAREALEQFQKVTRPLELSKAQLSFDRVQERAE
                     ESKQELEELMSMYKKEEFAALTKELVVNRGKKNLEFANR"
     gene            complement(693..>1618)
                     /locus_tag="VLJ38_13295"
     CDS             complement(693..>1618)
                     /locus_tag="VLJ38_13295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40545.1"
                     /translation="AFQIGANAVAVRALLGVEETPERRASLEKGIRWLCTTEMPKRGS
                     DWDIDYTWSAVCGFDACVRVALDPRFQTGELHDLVVARGKHFYGILVHNQDPLGGWGY
                     YEGPVVSQRPTWSTSFTTAFVVPALFLARKLDWGVDPKVGDRAVEYLAECALPNGAYQ
                     YSLDPIPRITGGVMINDVKGSLGRIQACNWARREAGDKRVTDEKIRAGVELFFEDHPF
                     LDVARLKPIPHEAYYQNAAYFYLFGHLFAALAINELPQAEREPLQARLRPHLLKVQSP
                     DGKSFDFLGSTFMETSGTAFAILALQAGLAR"
BASE COUNT          248 a          533 c          552 g          285 t
ORIGIN      
        1 gcggttggcg aactcgaggt tcttcttgcc gcggttcacg acgagctcct tcgtcaaggc
       61 cgcgaactcc tccttcttgt acatcgacat gagctcctcg agctcctgct tgctctcctc
      121 ggcgcgctcc tgcacgcggt caaagctgag ctgcgccttg gagagctcga gcggacgcgt
      181 gaccttctgg aactgctcga gcgcctcgcg cgccttctcc atgccgtact cggcgtcctg
      241 gagctcgtcc ttctccttgc gatcggcggc ttccgtctcg aggcgcgcga tcgtcagctg
      301 caggcgcgcg tcatcgagct cgcgctgctt cttcttcatc ttctcttcct tggcgtcctt
      361 gtcgtcctcg cccttctccg acttcgcctt ggcctcggac ttctcgggcg gagcgtcctt
      421 cgcggcggag tgcgtcgact ggcacgcgag gacgaggagg gaaagaggca cgagacagca
      481 cagttcgatg aagcgcatgt tcgaaggctc cagatggcgc agccgcacgc gcagccgcac
      541 gcgaaacggg cagagggggg aatggatggg gtcgggcgtc acacccggcg cgctcatgat
      601 gagagccccc gcgcgcgaag ggaagcctgc gcccgttctc gcgccgtcgg ggttgcgcaa
      661 gagtgccgcg cgagcccgcc gacgccgcgg cttcagcgcg cgaggccggc ttgcagcgcg
      721 aggatcgcga aggccgtgcc cgaagtctcc atgaacgtcg agccgaggaa gtcgaagctc
      781 tttccgtcgg ggctctggac cttcaggagg tgcgggcgca gccgcgcttg caacggctcg
      841 cgctccgctt gcggcagctc gttgatcgcg agcgccgcga agaggtgccc gaagagatag
      901 aagtaggctg cgttctggta gtaggcctcg tgcggaatcg gcttgaggcg cgcgacgtcg
      961 aggaacggat ggtcctcgaa gaagagctcg acgccggcgc ggatcttctc gtcggtgacg
     1021 cgcttgtcgc ccgcttcgcg gcgcgcccag ttgcacgcct ggatgcggcc gagggagccc
     1081 ttcacgtcgt tgatcatcac gccgccggtg atgcgcggaa tgggatcgag gctgtattga
     1141 taggcgccgt tcggcagcgc gcactcggcc aggtattcga ccgcgcgatc gccgaccttg
     1201 ggatcgacgc cccagtcgag cttccgcgcg aggaacaagg ccggcacgac gaacgccgtc
     1261 gtgaagctcg tcgaccacgt cggacgctgc gaaacgacgg gaccttcgta gtagccccag
     1321 ccgccgagcg gatcctggtt gtgcacgagg atgccgtaga aatgcttgcc gcgcgcgacg
     1381 accaagtcgt gcagctcgcc ggtctggaag cgcggatcga gagcgacgcg cacgcacgcg
     1441 tcgaagccgc acacggcgct ccacgtgtag tcgatgtccc agtcgctgcc gcgcttgggc
     1501 atctcggtcg tgcacaacca gcggatcccc ttctcgagcg aggcgcggcg ctcgggcgtt
     1561 tcctcgacgc cgagcagcgc gcgcacagcg acggcgttcg cgccgatctg gaatgcgt
//
LOCUS       DATIML010000774         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_743009, whole genome shotgun sequence.
ACCESSION   DATIML010000774 DATIML010000000
VERSION     DATIML010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743009"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /locus_tag="VLJ38_13300"
     CDS             complement(<1..608)
                     /locus_tag="VLJ38_13300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSU40546.1"
                     /translation="MAVRSVTEQTFEQEVLMSEVPVLVEFSAEWCGPCKVVAPELAAL
                     SSELADKAKIVTIDIDRSPNLSRQLGVQSVPTFVVFHQGRPAGGKVGALKRTQLREMI
                     EPYLPRAEGALKPDEVSQLLRAGRISIVDTREPAVYGRAHIPGAKSMPADEIEGRLAE
                     LFMLGSPPILYCRQGDRTKELVAKLVEQGLQVGFLEGGVLAW"
     gene            complement(668..>2063)
                     /locus_tag="VLJ38_13305"
     CDS             complement(668..>2063)
                     /locus_tag="VLJ38_13305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40547.1"
                     /translation="LAAMVLQTRYFRFLASVPRSVRGDDPSGSERLAEVAARARTSLP
                     LALLALALGVAASTLLTRWLARHERFDRRFVAGATLVAALPLAALGRRATALGTAGVV
                     AALALGLTALLVLELHAPRRRHARLRRAVARAGTLLPLTLGTFIGAEAVLGRGLGALA
                     SNALSHSDLEALLWIAAALSVTGGLAILLPDALPRGRAAVQALGAIAPPRPRVRSLAA
                     LLVVLAAVAVGALLVPSGSSAGARFVHAAAMTLVTTGIAALAAALVTLTLGVLAGGIS
                     RAADILLSRLVDLTHALPQPLFACATFTFGALVGALLLGGLRGIEIAHSLRLHLVARR
                     DAEQLEPPGLGHAPISPYLRRVLPAAVGPAALSLALTAAWLPALEGAGAELGAPTSAS
                     LGALSVMPGGLGLAAFALLALLTATLCLLARDISPRELGEETPGSPLVLPLRRRIDSV
                     RPPRPAPGPGGTTP"
BASE COUNT          349 a          689 c          783 g          242 t
ORIGIN      
        1 tcccaggcga gcacgccgcc ctcgagaaag ccgacctgca ggccttgctc gacgagcttg
       61 gcgacgagct ccttcgtgcg atcgccttgt cggcagtaga gaatgggcgg cgagcccagc
      121 atgaagagct ccgccagccg accttcgatt tcgtcggcgg gcatgctctt ggccccgggg
      181 atgtgagcgc ggccgtagac cgccggctca cgcgtgtcca cgatgctgat gcgcccggcg
      241 cgcaggagct gggacacctc gtcgggtttg agcgcgcctt cggcgcgcgg cagatacggc
      301 tcgatcattt cgcgcagctg agtgcgcttc agtgcgccga ctttgccgcc cgcggggcgg
      361 ccttgatgaa acacgacgaa cgtcggcacg gactggacgc cgagctggcg cgacaagttc
      421 ggcgagcgat cgatgtcgat ggtgacgatc ttggccttgt cagcgagctc gctcgaaagc
      481 gcggcgagct ccggcgcgac gaccttgcac ggtccgcacc attccgcgga aaactccacg
      541 aggacgggga cctcgctcat gagcacttct tgctcgaagg tctgctcggt gacggaacga
      601 actgccatgg cgaaagcttc ctagcactac ctcggcagtc ttggcatggc gagaatcacg
      661 atccggctta cggcgtggtt ccgcccggtc cgggtgccgg cctcggcggt cggacgctgt
      721 cgatgcgccg ccggagcggc aagacgagcg gtgagcccgg cgtttcttcg ccgagctcgc
      781 gaggcgagat gtctcgcgcg agcagacata gggtcgccgt gagcaacgcg agcagcgcga
      841 aggcggcgag tccgaggccg ccgggcatga ccgacaacgc gccgagcgaa gcggacgtgg
      901 gcgcgccgag ctcggcgccg gcgccctcga gggccgggag ccatgcggcc gtgagcgcga
      961 gcgagagcgc ggcgggaccg acggcggcgg gcagcacgcg tcgcaagtag ggcgaaattg
     1021 gcgcgtggcc gaggccgggc ggctcgagtt gttcggcatc gcgtcgggcc acgaggtgca
     1081 ggcgtagcga atgagcgatt tcgatgccgc gcagcccacc gagcaagagc gcgcccacca
     1141 aagcaccgaa cgtgaacgtc gcgcaggcga agagcggttg tggcagcgcg tgcgtgaggt
     1201 ccacgaggcg cgacagcaag atatccgcgg cacgtgagat gccgcccgcg agcacgccga
     1261 gcgtcaaggt gacgagcgca gcggcgaggg ccgcgatccc ggtggtgacg agcgtcatgg
     1321 ccgcggcgtg aacgaagcgg gcgccggcgc tcgagcccga cggtacgagc aacgcgccca
     1381 cggcgacagc cgcgagcacg accaaaagcg ccgcgagcga gcgcaccctc ggacggggcg
     1441 gcgcgatggc gccgagcgct tgcacggcag cgcgcccgcg cggcaaagca tccggtagta
     1501 agatcgcgag cccgcccgtg acggacagcg cggcggcgat ccagagcagc gcctcgaggt
     1561 cgctgtgcga aagggcgttc gaggcgagcg cgccgagccc gcggccgagc acggcttcgg
     1621 cgccgatgaa ggttccgagc gtcagcggca agagcgtgcc ggcgcgcgcg acggcacgcc
     1681 gcaaccgtgc gtgtcggcgg cgcggagcat ggagctcgag cacgagcagc gccgtgagcc
     1741 cgagcgcgag cgcggcgacc acgcccgcgg tgccgagcgc cgtcgcacgc cggccgagcg
     1801 ccgcgagcgg cagcgccgcg acgagcgtcg cgcctgcgac gaagcgccga tcgaagcgtt
     1861 cgtggcgcgc aagccagcgc gtgagcaacg tgctcgccgc cactccgagc gcgagcgcga
     1921 gcagcgcgag cggcaggctc gtgcgagcgc gcgctgcgac ctcggcgagg cgctcgctgc
     1981 ccgacggatc gtcgccgcgc acgctgcgcg gcaccgacgc gagaaagcgg aaatagcgcg
     2041 tttggagcac catcgccgcg agc
//
LOCUS       DATIML010000775         3497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2760844, whole genome shotgun sequence.
ACCESSION   DATIML010000775 DATIML010000000
VERSION     DATIML010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3497
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2760844"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..1174
                     /gene="bioB"
                     /locus_tag="VLJ38_13310"
     CDS             191..1174
                     /gene="bioB"
                     /locus_tag="VLJ38_13310"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HSU40548.1"
                     /translation="MPDTPDPMSPALRHDFTLPEVRAIHDAPLFELLDRARAVHRQFH
                     VENEVQLCTLLSVKTGGCPEDCSYCSQSSHHETSVKGESMLPVNEVIERARAAKARGA
                     TRFCMGAAWREPKEGPNFERVLEMVRGVKDVGLEACVTLGMLTDSQAERLKAAGLDAY
                     NHNLDTSRTHYRSIITTRTFDDRLATLRRVRNAGITVCSGGIIGMGESVDDRCSMLIE
                     LASLAPHPESVPINALVRVEGTPLAAMPPVDPLELVRLIATARIMMPKTRVRLSAGRA
                     ELGREAQLLALYAGANSIFYGEQLLTTPNPGEDADTELIRAAGLRAQAPSA"
     gene            complement(1148..2077)
                     /locus_tag="VLJ38_13315"
     CDS             complement(1148..2077)
                     /locus_tag="VLJ38_13315"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HSU40549.1"
                     /translation="MRAALPWALALSVGASLLAAAPARAEYCRTKSCDNQAAYDDVWQ
                     TEPDPPCQRDSVGCLLYGTPLYWPQTCISFSVQRDGSPKDGIEYELADQTVRTAFQTW
                     LNADCGDGATPSFAIADYSPAICDKAQYNKDAPNANIFMFRDASWPYANSEDTLALTT
                     ITYNTENAQIYDADVEINSAEATFTFSDEASDTIDDLQAVLTHECGHFLGLSHDPVGT
                     STMYPQYAPGDLFQRTLDVDDTAGICDIFPPGQSIDTNVCTPRHGFSRECGAAHDTTT
                     CGVATGRTGAWPNALLVALGVGVSALRRRRLRA"
     gene            complement(2074..2592)
                     /locus_tag="VLJ38_13320"
     CDS             complement(2074..2592)
                     /locus_tag="VLJ38_13320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40550.1"
                     /translation="MSLVGLYEGHALGAVAKALTVADLVKKSTSTLVVTAVAQRSSWV
                     NLAGSERIVTDTQARVEELVTGIDPSARQIMLRTLGGRVGTTGQIVEGEAELSVGETS
                     LTFLTQFEPAIYAVTAMAQGHYPIVNQAGARVLATNRVLPALLKRSGSAVERLAGKKL
                     ADAVALVRAEHR"
     gene            2722..>3497
                     /locus_tag="VLJ38_13325"
     CDS             2722..>3497
                     /locus_tag="VLJ38_13325"
                     /inference="COORDINATES: protein motif:HMM:NF015410.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /protein_id="HSU40551.1"
                     /translation="MPASVPTLDRRSPTLAAELKSYVQRHRIAIETLVRAAGPEAGLP
                     AAVRYSKVIDGLLCALFRALETSMTADGTWIPVGLAAVGSYGREELALNSDLDVRLIS
                     SAKVDKVRPVAEALLYPLWDAGLTIGHQVVTANEVLELAHNDLPTATTLLDWRLVAGD
                     RAMSDKLVERAAEGLFGIGNISKFLERLAKRVTERGERYGGSVYLLEPDVKNGIGGLR
                     DIDVACWAARARFHVKTLKELVRVGVLLAREWQEIEEAMNL"
BASE COUNT          567 a         1148 c         1212 g          570 t
ORIGIN      
        1 attgatggag cagggcggct cgctttacgg catgcagacg ttcgaaatgc acgtgaaaga
       61 gctgctccgc gagggcacca tcgaccgcga ggtcgggcgc gcgaacatgg gcttttagcc
      121 gcgcagcgag cgcggctggg cggcgaggtt ttgaccgccg ggccgcggca cgataaaccg
      181 cggcgacacg atgcccgaca cacccgatcc catgagcccg gcgctgcgtc acgatttcac
      241 tctgccggag gtgcgggcca tccacgacgc gccgctcttc gagctgctcg atcgcgcccg
      301 cgccgtgcat cgccagtttc acgtcgaaaa cgaggtgcag ctctgcacgc tgctcagcgt
      361 caagacgggc ggctgtcccg aggactgctc gtactgctcg cagtcgtcgc accacgagac
      421 gagcgtcaag ggggagtcga tgctgcccgt gaacgaggtg atcgagcggg cacgcgcggc
      481 caaagcgcgc ggcgcgacgc gcttctgcat gggcgcggcc tggcgcgagc ccaaagaagg
      541 accgaatttc gagcgcgtgc tcgagatggt gcgcggcgtg aaggacgtgg ggctcgaagc
      601 gtgcgtgacg ctcggcatgc tcaccgattc gcaagccgag cggctcaaag ccgcagggct
      661 cgacgcgtac aaccacaacc tcgacacgtc gcgtacccac taccgttcga tcatcacgac
      721 gcgtaccttc gacgatcgcc ttgcgacgct ccgccgcgtg cgtaacgccg gcatcacggt
      781 gtgctcgggt ggcatcatcg gcatgggcga gagcgtggac gaccgctgct cgatgctgat
      841 cgagctcgcg tcactcgcgc cgcacccgga gagcgtgccg atcaacgcgc tcgtgcgcgt
      901 cgaaggcacg ccgctcgcag cgatgccgcc cgtcgatccg ctcgagctcg tgcggctcat
      961 cgcgacggcg cggatcatga tgccgaagac gcgcgtgcgc ttgagcgcgg gtcgcgcgga
     1021 gctcggtcgc gaagcgcagc tcttggcgct ctacgcgggt gcgaacagca tcttttacgg
     1081 cgagcagctg ctcacgacgc cgaaccccgg cgaagacgcc gacaccgagc tcatccgcgc
     1141 cgcgggacta cgcgcgcagg cgccgtcggc gtaacgccga gacgccgaca ccgagcgcga
     1201 cgagcaaggc gttcggccac gcacccgtgc gccccgtcgc gacgccgcac gtcgtcgtgt
     1261 cgtgagccgc gccgcattca cgcgagaagc cgtggcgcgg tgtgcagacg ttcgtgtcga
     1321 tgctttgacc cggcgggaaa atgtcgcaaa tgcccgccgt gtcgtcgacg tcgagggtgc
     1381 gctgaaagag gtcgcccggt gcgtattgcg ggtacatcgt cgacgtgccc accggatcgt
     1441 gcgagagccc tagaaaatgg ccgcactcgt gcgtgagcac ggcttgcagg tcatcgatgg
     1501 tgtcgctcgc ctcgtcggag aacgtgaagg tcgcctccgc cgagttgatc tcgacgtcgg
     1561 cgtcgtagat ctgcgcattt tcggtgttgt acgtgatggt cgtgagcgcg agggtgtctt
     1621 cggagttcgc gtagggccag ctcgcgtcgc ggaacatgaa gatgttcgcg ttcggcgcat
     1681 ccttgttgta ctgcgccttg tcgcagatcg cggggctgta gtccgcgatg gcgaagctcg
     1741 gcgtcgcgcc gtcgccgcaa tcggcgttga gccacgtttg gaacgcggtc ctcacggttt
     1801 ggtccgcgag ctcgtactcg atgccgtcct tcggcgagcc gtcacgctgc acgctgaaag
     1861 aaatgcacgt ctgtggccag tagagcggcg tgccgtaaag caaacagccg acgctgtcgc
     1921 gctggcaggg cgggtcgggt tccgtctgcc agacgtcgtc gtaggcggcc tggttgtcgc
     1981 aggacttcgt gcggcagtat tcggcacgcg ccggggcggc cgcgagcagg ctggcgccga
     2041 ccgagagcgc tagggcccag ggcagggccg ctctcatcgg tgctccgcgc gcaccagggc
     2101 gacggcgtcg gcgagctttt taccagcgag tcgttcgacg gcggagccgg agcgtttgag
     2161 cagcgcgggg agcacgcggt tcgtcgcgag cacgcgagct cccgcctggt tgacgatcgg
     2221 gtagtggccc tgcgccatgg ccgttacggc gtaaatggcc ggctcgaact gcgtgaggaa
     2281 ggtgagggaa gtctcaccca cgctgagctc ggcttcgccc tcgacgattt gaccggtggt
     2341 gccgacgcgc ccgccgagcg tccgaagcat gatctgtctc gcgctcgggt cgataccggt
     2401 gacgagctcc tccacgcgcg cctgcgtgtc ggtgacgatg cgctccgagc ccgcaagatt
     2461 gacccagctc gaccgctggg caacggccgt cacgacgagc gtgctcgtgc tcttcttgac
     2521 caggtccgct acggtcagcg ctttggccac ggcgccgagc gcgtggcctt cgtagagccc
     2581 gaccagggac atgcccagga cggataatgc tccccgccta tccatccgta gaccatagca
     2641 tccgggacgg tttgggcgag cagcgcgagg gtgcgccttg gggtataacc ccgggccggc
     2701 cgcatgccgt ctccaagctc cgtgcccgcg tcggtcccca ccctcgatcg tcgatccccg
     2761 acgctagctg ccgagctcaa aagctacgtg cagcggcatc gcatcgcgat cgaaacgctc
     2821 gtgcgagcgg cagggccgga ggccggtctg cccgctgccg tgcgttacag caaagtcatc
     2881 gacggcctgc tttgcgccct ctttcgcgcg ctcgaaacct cgatgaccgc cgacggcacg
     2941 tggataccag tcggcctggc ggccgtcggg agctacgggc gggaggagct ggcgctcaat
     3001 agcgacctcg acgtgcgcct gatctcgtcg gccaaggtgg acaaggtaag acccgtggcc
     3061 gaggcgctgc tctacccgct ctgggacgcg ggtctcacca tcggccacca ggtcgtcacc
     3121 gcgaacgagg tgctcgagct cgcgcacaac gatctaccga ccgcgaccac gctgctcgac
     3181 tggcggctcg tcgctggcga ccgcgccatg agcgacaagc tcgtcgagcg cgcggccgag
     3241 ggcttgttcg gcatcggcaa catctcgaaa ttcctcgagc ggctcgccaa gcgcgtgacc
     3301 gagcgcggcg agcgctacgg cggctccgtc tacttgctcg agcccgacgt gaagaacggc
     3361 atcggcgggc tgcgcgacat cgacgtagcg tgctgggccg cgcgggcccg cttccacgtg
     3421 aagacgttga aggagctcgt gcgcgtcggc gtgctgctcg cgcgcgaatg gcaggaaatc
     3481 gaagaggcga tgaacct
//
LOCUS       DATIML010000776         3001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4493691, whole genome shotgun sequence.
ACCESSION   DATIML010000776 DATIML010000000
VERSION     DATIML010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4493691"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VLJ38_13330"
     CDS             <1..594
                     /locus_tag="VLJ38_13330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsinothricin resistance N-acetyltransferase
                     ArsN1 family B"
                     /protein_id="HSU40552.1"
                     /translation="DAAGIAAVYAPYVASTPISFELVPPSPPEMAERIAHVTAHAPWL
                     VVEEEQGVSGYAYLSLHKERAAYQWSADCAVYVASARRRAGLGRALYTTLFELGRLQG
                     FCAVHAGITLPNAASVGLHEAFGFVPIAHYPKVGHKLGAWHDVGWWQLELNPRNAAPP
                     QRRSPLQVAHEDPDAWAAAFEAGGRLLRGAAGSQSGP"
     gene            complement(631..2835)
                     /locus_tag="VLJ38_13335"
     CDS             complement(631..2835)
                     /locus_tag="VLJ38_13335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40553.1"
                     /translation="MLSGGASLPWAWYLLFVLMVLAYVIDCCRQHASSSRFARAEFPE
                     RIDEKHDRQLDCAIARTKWLLYGAIRSFLFALVFAYMGVVCVLALVAHGGVLLGSGFH
                     ALYFGLGVVIVAGAAGHSGYTAIRAVRRYFVRYRAFGRCVGATLVPESVEDVQDGMKP
                     SGSAGRPRVAAEDGAADAGNLPSNPPPGTRPDSKPPSSRRPLSERVPLALGVLEPVGI
                     IDVARTSFAQLRNLTVLAGVLALGLVGALVLDTWSATDAGVDVTARPQLTLVALRAAS
                     LLSGVSPSAPALLCMAAIYVWAVGRMARLALAHSLSRGCPDDAEMDLVSTPMRLILYP
                     GYSRRQGSDAGFTEVERNLSNAIWRPITGRYYPWATLALVLCPLIVFTLKPLSTLEGC
                     AGTLYLGGALALSAVLIGSTLLQLVQFWLAFERLLKRTMEHPLSPAFRTLPPFAQDSV
                     DHQVSRSPDELLRWSACARLFHDLTRSAPALVPPQLIALKNGICEARERALLGFQAAE
                     PATPGEHPSVPPPDNSGRDAVRAELQAALERSVVAAASRVTELLSVHWNAQATAGTPA
                     AQGNSKGSGEPPVERDALWPLEQSGATRELAWLRAAQTFVATVVTLIIHRHARQFRYF
                     LCVTTLCSLLLVCAIASYPFEPYRLLLTYVWVVTGSTVTAGLAVFVQMDRNTLLSHIA
                     GTSPNSVTWNAAFVLRVVAWAVVPLFGVAAAQYPELANFLSELLGPFTRALR"
BASE COUNT          543 a          985 c         1035 g          438 t
ORIGIN      
        1 gacgccgcag gcatcgccgc cgtgtacgcg ccgtacgtcg cgagcacgcc catctcgttc
       61 gagctcgttc ctccatcgcc gccggagatg gccgaacgca tcgcgcacgt cacggcgcac
      121 gcgccgtggc tcgtcgtcga ggaggagcaa ggcgtgagcg gctacgcgta cctgtcgctg
      181 cacaaggagc gcgccgcgta ccaatggtcg gcggattgcg ccgtgtacgt cgcgagcgcc
      241 cgccgccgcg cggggctcgg tcgggcgctc tacacgacgc tgttcgagct cgggcggctc
      301 caaggctttt gcgccgtgca cgccggcatc acgctaccga acgccgcgag cgtcggcttg
      361 cacgaggcgt tcggcttcgt gccgatcgct cactacccca aggtcggtca caagctcggc
      421 gcctggcacg acgtcggctg gtggcagctc gagctcaacc cgcgcaacgc cgcgccacca
      481 cagcgccgct cacccctgca ggtagcgcat gaggatccgg acgcctgggc ggcggcgttc
      541 gaggcgggcg ggaggctact ccgtggcgcc gctggatcgc agagcgggcc ctgagaagct
      601 ccgcggccag gaccgcttgg ggcagtcggt tcaacgcagc gcacgcgtga acggccctag
      661 gagctccgaa agaaagttcg cgagctccgg atattgcgct gccgcgacgc cgaatagcgg
      721 gacgacggcc caggcgacca cgcgcaacac gaaggcggcg ttccaggtaa cgctgttcgg
      781 tgacgtgccc gcgatgtggc tgagcaacgt attgcgatcc atctgcacga agaccgcgag
      841 acctgccgtg accgtcgacc cggttaccac ccacacgtag gtgagcaaga ggcggtaggg
      901 ctcgaacgga tagcttgcga tcgcacacac cagcaggagt gagcagagcg tagtgacgca
      961 gagaaaatag cggaattggc gcgcgtgacg atggatgatc agggtcacga ccgtggcaac
     1021 gaaggtctgc gccgctcgca gccaggcaag ctctcgggtc gccccgctct gctcgagcgg
     1081 ccaaagcgcg tctctttcca cgggcggttc gccggacccc ttggagttac cctgtgcggc
     1141 gggggttccg gcggtcgcct gcgcgttcca atgcacgctc agtagctcgg tgacgcgcga
     1201 agcggccgca acgacgctgc gttccagcgc cgcttgcaac tcggcgcgca cggcgtcgcg
     1261 tcccgagttg tccggaggcg gcaccgaggg gtgctccccc ggggtcgctg gttcagccgc
     1321 ttggaagccg aggagtgctc gttcgcgcgc ctcgcaaatg ccgttcttca aggcgatcag
     1381 ctgaggtggt acgagcgcgg gcgcagaacg cgtgagatcg tgaaacagcc gggcgcacgc
     1441 ggaccagcgg agcagttcgt ccggcgagcg agagacctgg tggtcgaccg agtcctgcgc
     1501 gaacggcggc agagtgcgga acgccggcga cagcgggtgt tccatcgtgc gtttgagtaa
     1561 acgctcgaac gcgagccaga actggacgag ctggagaagc gtcgagccga tgagtacggc
     1621 gctgagcgct agcgctcccc cgaggtagag cgtaccggcg cacccttcca gggtcgacag
     1681 gggcttcagc gtgaacacga tcagtggaca gaggacgagc gcgagcgttg cccaggggta
     1741 gtaccgcccc gtaatgggcc tccagatggc gttactgagg ttgcgttcga cttccgtgaa
     1801 gccggcgtcc gacccttgtc ggcgcgagta cccgggataa aggatcaaac gcatcggcgt
     1861 gctcacgaga tccatttctg cgtcgtcggg gcaaccgcga gagagcgagt gagcgagcgc
     1921 gagccgcgcc atgcgaccga cggcccagac gtagatggct gccatgcaca gcagcgccgg
     1981 tgccgaaggg gaaacgccac tgaggagact cgccgcccgg agcgcgacca gcgtcagctg
     2041 aggccgggcg gtgacatcca cgccagcgtc ggtcgcgctc caggtgtcga gcacgagggc
     2101 cccgacgagc ccgagcgcga gcacgcccgc aagcaccgtg agattgcgga gttgcgcgaa
     2161 cgaggtgcgc gcgacgtcga tgattcccac gggctcgagc accccgagag cgagaggaac
     2221 tcgctcactc aggggccggc gcgacgatgg tggtttggaa tcgggcctcg tgccgggcgg
     2281 cgggttcgac ggcaaattgc cggcgtcggc ggcgccgtcc tcagccgcga ctcgcgggcg
     2341 tcccgcggag ccgctcggtt tcataccatc ctgaacgtcc tcgacgcttt cgggcacgag
     2401 cgtcgcgccg acgcagcggc cgaatgctcg atatcgaacg aagtagcgcc gcacggcgcg
     2461 tatcgccgtg tagccagagt ggccagcggc ccccgccacg atcacgacgc cgagtccgaa
     2521 gtacagtgcg tggaacccgc tcccgaggag aacgcctcca tgcgcaacga gcgccagcac
     2581 gcaaacgacg cccatgtacg cgaacaccag cgcaaacaag aacgagcgaa tggcgccata
     2641 caaaagccac ttcgtgcgcg cgatggcgca gtcgagctgt cggtcgtgct tctcgtcgat
     2701 cctttcgggg aattcggccc tggcgaagcg gctcgagctt gcgtgttggc ggcagcagtc
     2761 gatgacgtaa gccagcacca tcagcacgaa cagcaagtac caagcccagg gcaagctcgc
     2821 gcccccgctc agcaacaggg gttcttgttg cgctgctttg aacgcggccc aggccttcct
     2881 tcgcgccgcc tcgtccgcgg gatgacatag gccgctctca gcatcaggac tcaatcccga
     2941 taggtacaga cgtttcccgc aatccgccgt gggcgtcact cggttcggtg acagtacacc
     3001 g
//
LOCUS       DATIML010000777         2806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4493736, whole genome shotgun sequence.
ACCESSION   DATIML010000777 DATIML010000000
VERSION     DATIML010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4493736"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..750)
                     /locus_tag="VLJ38_13340"
     CDS             complement(<1..750)
                     /locus_tag="VLJ38_13340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40554.1"
                     /translation="MRGACAMLVAALVLSCQSSSERPPPPTCVGDCGLDPGLGAGMSP
                     GGGGAEGEGGSDGGTSKGVLLTGRVLVLNDDVNFVSGAPYTGVTDLKTKGVDGRTVTA
                     QWNGSEPFSLVGVLRTAPLWVLATPQNLRADDVLPVLEPVRTDKPDAQGTVTADLALV
                     HATSIDRLFELASVPLTNDSSKAQIILRLVDKTSTATDPPPLPGIGVSAPTAEATLYG
                     ASGGFSSVATATDVTGVVVLANVGGAAYPGAL"
     gene            complement(750..1715)
                     /locus_tag="VLJ38_13345"
     CDS             complement(750..1715)
                     /locus_tag="VLJ38_13345"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HSU40555.1"
                     /translation="MHGRLFQFDLGFLKEDLVMPGPSYFVLLLAGFLIATIMGALWAR
                     RVGQNPDVIVDLGLAMVLAGIAGSRLLHVLADGHFMEYVHRCTAPALVDWHVTRHECL
                     GPDIAGVWDATRALCHPKEPDCLAWAKFYNGGFTYYGGFVAASVAAWYLLKTDRFPFW
                     KAADMAGMVVPVGLGFGRLGCLLAGCCFGKPWQSALAVHFPGGSPASEAQHLAGLVSS
                     TASESLSVHPTQLYESAASFAIAAFLILYLHGRKRYDGQIFVAFVASYATVRFMLEFV
                     RADDRGGLLFLSTSQLLGIVLVAAAVVAHRRLVARALTLFRPEAA"
     gene            complement(1741..2433)
                     /gene="lspA"
                     /locus_tag="VLJ38_13350"
     CDS             complement(1741..2433)
                     /gene="lspA"
                     /locus_tag="VLJ38_13350"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HSU40556.1"
                     /translation="MSDPEEPRAPEVPVPAIGPEAVVAPAFASGPPAMRDRPTFIFFG
                     AVAAVSLILDVVTKAWAEIVLSKRPFDSPSLVLVPQHLTLTIAYNKGGAWGLLQDAAE
                     TVRRPFFFAVSVLAVLFIVSLYSKLGRGQRALMWGLPLVLGGALGNLSDRVTRSSVID
                     FIDYRADWVLAMNSAIAKAVPHWGLTDHWPTFNVADIAICIGVGLMAIDMFTARRGPE
                     RRSEPVGPALGA"
     gene            2600..>2806
                     /locus_tag="VLJ38_13355"
     CDS             2600..>2806
                     /locus_tag="VLJ38_13355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40557.1"
                     /translation="MRRCFAAERSVAPRAGRFASLPADLSAELTQALAARGVKELYSH
                     QREAIDAARAGGHVVVATPTASGKS"
BASE COUNT          506 a          922 c          987 g          391 t
ORIGIN      
        1 gagcgcgccc gggtacgccg cgccgccgac attcgcgagc acgacgacgc cggtcacgtc
       61 cgtcgcggtc gcgacgctgc tgaagccgcc gctcgcaccg tacaacgtcg cttccgcggt
      121 gggggcgctc acgccgatgc ccgggagcgg aggcggatcc gtcgcagtcg acgtcttgtc
      181 gaccaagcgc aagatgatct gcgccttgct ggagtcgttc gtgaggggga cgctcgccag
      241 ctcgaacagc cgatcgatgc tcgtcgcgtg gacgagcgcg aggtcggcgg tgaccgtccc
      301 ctgcgcatcc ggcttgtccg tgcgcacggg ctcgaggacc ggcaggacgt cgtcggctct
      361 gagattctgg ggtgttgcga gcacccagag cggcgcggtt cggagcacgc cgactagtga
      421 gaacggctcg gaaccgttcc actgcgcggt gactgtccgg ccgtcgacac ctttggtctt
      481 cagatcggtg accccggtgt agggagcgcc cgacacgaag ttcacgtcat cattcaggac
      541 gagcaccctg cccgtgagca ggacgccttt cgacgtgccg ccgtccgaac caccctcgcc
      601 ttcggcgccg ccaccgcccg gagacattcc cgcgccgagc cccggatcga gcccgcaatc
      661 gccgacgcac gtcggcggcg ggggccgctc cgagctcgat tggcagctca gcacgagcgc
      721 ggcgacgagc atggcgcacg cgccgcgcat caagccgcct ctggccgaaa cagcgtgagc
      781 gctcgcgcga cgagccggcg atgggcgacg accgcggccg cgacgagcac gatgccgagc
      841 agctgggacg tgctcagaaa gagcaagcca ccgcgatcgt cggcccgcac gaactcgagc
      901 atgaagcgca ccgtcgcgta gcttgcgacg aacgcgacga agatctgccc gtcgtaacgc
      961 tttcggccgt gcagatacag gatgaggaac gccgcgatcg cgaagcttgc ggcagactcg
     1021 tagagctgcg tggggtggac ggagagtgat tcgctcgcgg tcgagctcac gaggccggcg
     1081 agatgttgcg cttcgctcgc cggactacca ccgggaaaat ggacggccag ggccgattgc
     1141 cagggcttac cgaagcaaca cccggcgagc aggcaaccca agcgaccgaa gccgagaccg
     1201 acgggaacga ccatgcccgc catgtcagcg gccttccaaa acggaaagcg atcggtcttg
     1261 agcaggtacc aagcggccac ggacgcggcg acgaagccgc cgtaataggt gaagccgcca
     1321 ttgtaaaact tcgcccacgc caggcagtcg ggctctttcg ggtgacacag ggctctggtc
     1381 gcgtcccaga cgcccgcgat gtcggggccg aggcactcgt ggcgggtgac gtgccaatcg
     1441 acgagtgccg gcgccgtgca gcgatgcacg tattccatga agtgcccgtc ggcgagcaca
     1501 tgcaggagcc gtgagccggc gatgccggcg agcaccatgg cgagccccaa atcaacgatc
     1561 acgtcggggt tttggccgac gcggcgggcc cagagcgcgc ccatgatggt cgcgatcaaa
     1621 aaacctgcga gcaggagcac gaaatagctc ggccccggca tcacgaggtc ttccttcaga
     1681 aaaccgagat cgaattggaa gagcctgccg tgcatcttcc ttgcctccgc tcgagtcgta
     1741 tcaggcgccg agcgccggac cgacgggctc cgaacgccgc tcgggaccgc ggcgcgccgt
     1801 gaacatgtcg attgccatca ggccgacacc gatgcaaatc gcgatatcgg caacgttgaa
     1861 ggtcggccag tgatcggtga ggccccagtg cggcacggct ttcgcgatcg cgctgttcat
     1921 cgcgagcacc caatcggcgc gatagtcgat gaaatcgatc acgctgctgc gcgtgacgcg
     1981 gtcggacaag ttgccgagcg cgccgccgag cacgagcggg aggccccaca tgagcgcgcg
     2041 ctggccacgc ccgagcttcg agtagagcga cacgatgaag agcacggcga gcacgctcac
     2101 ggcgaagaag aacggacggc gtacggtctc cgccgcgtct tgcaggagcc cccaggcccc
     2161 gcccttgttg taggcgatcg tcagcgtgag gtgctggggg acgagcacga gcgagggact
     2221 gtcgaagggg cgcttcgaga gcacgatctc cgcccatgcc ttggtgacga catcgaggat
     2281 gagcgacacc gccgccacgg ccccgaaaaa gatgaacgtg gggcggtcgc gcatcgccgg
     2341 cgggccgctc gcgaacgcgg gggcaaccac cgcctcgggg ccgatggccg ggaccggaac
     2401 ttcgggggcg cggggctcct cgggatcact catcagggcg gtctcctacg acattccggc
     2461 gtcggcggtc gagttcggcg cgcggtaggg gctggcgcac cacggaacat ctgtttagca
     2521 tagcgcggtg gctgccgaac cttggtcgaa atctcgcggc atcgatgcgg tcttggcggg
     2581 gtggcagggg gccggggcgg tgcgccgctg tttcgcggct gaacgcagcg tcgcgccacg
     2641 tgccggccgc tttgcgagcc tgccggccga tcttagcgcg gagctcaccc aagcgctcgc
     2701 ggcgcgcggc gtgaaggagc tttacagcca tcaacgcgag gcgatcgacg cggcgcgagc
     2761 gggcggccac gtcgtcgtcg cgacgccgac ggcgagcggc aagagc
//
LOCUS       DATIML010000778         2380 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5651158, whole genome shotgun sequence.
ACCESSION   DATIML010000778 DATIML010000000
VERSION     DATIML010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5651158"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..905)
                     /locus_tag="VLJ38_13360"
     CDS             complement(<1..905)
                     /locus_tag="VLJ38_13360"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU40558.1"
                     /translation="MSPEGPPAAGETIGQRLKRLRLERGFSQRELAAPGVSYAYISRI
                     EAGTRQPSVKALRRLAAKLGVTADYLETGSDLDAEAARELRLTDLELAIRLGEADGAQ
                     PGLEALAAEAAAAGDRRTLLRANVALAALAQERGTHGDAVMLLESALQGEAFDPFSLA
                     DIYSQLARAYVASGRTSAAVELFERCLDQVADGEDPALEARYATALSYALSDIGDITR
                     AEAVVQRALERSAEIEDPYMRVRLYWSMARLAHHEGRSTAALENVRKAIALLRLTDDT
                     LHLARANLLAASISLARDDADTAAS"
     gene            1358..>2380
                     /locus_tag="VLJ38_13365"
     CDS             1358..>2380
                     /locus_tag="VLJ38_13365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40559.1"
                     /translation="MAALELVLYALFLLVTGLAVWRRPVAALFLFVVGLALHNAVMAA
                     LYGAGVRGSTLTAITAWKEVLLVVALARVSADAFRARRLPFDWSVVDWLALAFAALCV
                     VYALIPQSALGGDAGHRAVALGLRHDVVPVGAYFLGRALALTREQWRALAWTLLGTAA
                     AVAAWGLIDVYAIPISWWRSSAVVPYFRSHLGYHYNGTGHLPENFIYNVGGDKPFLRR
                     LVSTYLSPLASGYLFVVALLVASRWRRVAIALSVIVFAGLLWTFSRSSLVALAVGLVV
                     LACVCRRRLALFGAAALVIAVAVGWAHLFPHIAPTGRFTQADLRFQHSQAHKGPKTAF
                     CAVCSNE"
BASE COUNT          289 a          818 c          821 g          452 t
ORIGIN      
        1 tacgaggcgg cggtgtcggc gtcgtcgcgc gcgagcgaga tgctcgccgc gagcaggttg
       61 gcccgcgcaa ggtggagtgt gtcgtccgtc aggcgaagga gtgcgatcgc cttgcgcacg
      121 ttttcgagag cggctgtgct gcggccctcg tgatgtgcga ggcgcgccat cgaccagtag
      181 aggcgaaccc gcatgtacgg gtcctcgatc tctgccgacc gctcgagcgc acgctgaacg
      241 acggcctcgg cgcgcgttat gtcgccgatg tcgctgagcg cgtaactgag tgcagtcgcg
      301 tacctcgcct cgagtgcggg atcctcgccg tctgcgacct ggtcgaggca gcgctcgaag
      361 agctccacgg cggcgctcgt gcgccccgag gcgacatacg cgcgtgcgag ctgcgaatag
      421 atgtccgcaa gcgagaacgg gtcgaacgcc tcgccctgga gggccgactc gagaagcatt
      481 accgcgtcgc cgtgagttcc ccgttcctgc gcaagcgcgg caagcgcgac gttcgcgcgg
      541 agaagtgttc gccggtcgcc cgccgcggcc gcttctgcgg cgagtgcctc gaggcccggc
      601 tgcgccccgt cggcctcgcc gagccggatg gcaagctcga ggtcggtcag ccgcagttcg
      661 cgcgccgctt ctgcgtcgag atccgagccg gtctcgaggt agtccgcggt gacgccgagc
      721 ttcgcggcca ggcgacgcag cgctttcacc gacggctggc gagtgcccgc ttcgatgcgg
      781 gagatgtagg catacgagac gccgggcgcg gcaagctcac gctgagagaa ccctcgctcc
      841 agccgcaggc gcttgagccg ctgcccgatt gtctcgcctg cggccggcgg tccctcgggg
      901 ctcatgtggg caaatcatta ccgcgttcgg cggacggcgt caatagcgac ttgacaacag
      961 ttgtcagcct tgtttccgtc cttggcgaca accgagtccc tcgaccgagg gactcatgac
     1021 agaaaggtgg gagagtgtcc cgctacacgt tctacgtgcg cttcgcgctg ctcgtcgcgg
     1081 ttctcgcgac ggcggccgtc ctcctcggta acgagccgtg ggggccctgg tagccgacct
     1141 cggtctggct gcggacgaga gctgcggctc taaaacacgc gacaagaaag gtgggaaacg
     1201 tgtcccgcta ttcgttctat ctccgcttca ccgtcctcgt tgcgatcctc gcgacgcttg
     1261 cagtgctcct cggcaacgag ccgtggggcc cctggtaggc cgctaggccg ttcagcgggc
     1321 gggggctcgg ctcccccgcc cgctgtaccc tcgccacgtg gcggcgctcg agctcgttct
     1381 ctacgcgctg ttcctgctcg tcacggggct cgcggtctgg cgccggcccg tggcggcgct
     1441 ctttctcttc gtcgtcgggc tcgcgctgca caacgcggtc atggccgcgc tctacggcgc
     1501 gggcgtgcgc ggctcgacgc tgacggcgat caccgcgtgg aaggaagtgc tgctcgtcgt
     1561 ggcgctggcg cgcgtctcgg cggatgcctt ccgtgctcgg cggcttccgt tcgactggtc
     1621 tgtcgtcgac tggctcgcgc tcgcgttcgc cgcgctctgc gtcgtgtacg cgttgatccc
     1681 gcagtccgcg ctcggcggcg acgccggaca tcgcgcggtc gcgctcggcc ttcggcacga
     1741 cgtcgtccct gtcggtgcgt acttcctcgg ccgcgcgctc gcgttgacgc gcgaacagtg
     1801 gcgggcgctc gcgtggacgt tgctcgggac ggccgccgcc gttgccgcgt ggggattgat
     1861 cgacgtctac gcgatcccga tctcctggtg gcgctcgagc gcggtcgtgc cgtacttccg
     1921 ctcccacctc gggtaccact acaacggcac cggccacctg cccgagaact tcatctacaa
     1981 cgtcggcggc gacaagccgt tcctgcggcg gctcgtgtcg acgtatctct caccgctcgc
     2041 gagcggctac ctgttcgtcg tcgcgctgct cgtcgcgtcg cgttggcgtc gtgttgcgat
     2101 tgcgttgtcg gtcatcgtgt tcgcaggatt gctctggacg ttctcgcgct cgtcgctcgt
     2161 tgcgctcgca gtcgggctcg tcgtgctcgc gtgcgtttgc cgtcgtcgcc ttgcgctgtt
     2221 cggtgccgct gcgctcgtga tcgcggtcgc cgtcggctgg gcgcacctgt ttccgcacat
     2281 cgcgccgacc ggccgcttca cgcaggcgga cctccgcttc cagcacagcc aggcgcacaa
     2341 ggggccgaag acggccttct gtgccgtgtg ctcgaacgag
//
LOCUS       DATIML010000779         1864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4788087, whole genome shotgun sequence.
ACCESSION   DATIML010000779 DATIML010000000
VERSION     DATIML010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4788087"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..952
                     /locus_tag="VLJ38_13370"
     CDS             <1..952
                     /locus_tag="VLJ38_13370"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSU40560.1"
                     /translation="LALSTFACGGSEPAPASPPPPAPEPAPVVAAPPAPAVTLASVTP
                     APAPAPKLKLRVVTGSPEGFLANSTLVTGDKDAVLIDAQFTIADGKRVADAVKESGKN
                     LTLVYVTHSHPDHYFGFVSIKEAFPNAKLVALPATVAEIQKTWEAKVKQWKPLYKETI
                     TAKPFLPDAMSSTTLELEGQKLEVTGGVQGDESENSYVSIPSLHALVTGDVVYDQVFP
                     WTAETTPEQRKTWEGALDHLGTLTATVIVPGHQKPERQQNPDDLAFTKNYLIAFDEAI
                     ATSKKPAELQAKMKAKYPDAALDVILKLGAEAAFKKAPKK"
     gene            1007..1612
                     /locus_tag="VLJ38_13375"
     CDS             1007..1612
                     /locus_tag="VLJ38_13375"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU40561.1"
                     /translation="MSALERSVAASPAAPATGVDASAIDRAMSRYADGDDRAFGEVFE
                     ALAPRLHAFLRRLSGSEELAGDLVQETFLRMHRARGSFARSGAVLPWAYAIARNCYVT
                     HTRSFKTKVSRASIDIQEHEVPTGLETNAEEAASALERAAIVERTLARMSEANREAFI
                     LIRFEGQSVANAAQILGASESAVKLRAFRAYEQLREALGRP"
     gene            1609..>1864
                     /locus_tag="VLJ38_13380"
     CDS             1609..>1864
                     /locus_tag="VLJ38_13380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40562.1"
                     /translation="MTTPSEEELLARLGEIPDRAPPGLRPLPRLPALPRAAVRDETRR
                     RRLLALGASVLWLGSNLALLGLRKDLGELPSPYLQAEVVLP"
BASE COUNT          349 a          671 c          573 g          271 t
ORIGIN      
        1 gctcgcgctc tcgacgttcg cgtgtggcgg ctccgaaccc gcgccagcgt cacctccgcc
       61 cccagcgccg gagcccgcgc cggtcgttgc cgcacctccg gctcccgccg tgaccctcgc
      121 gtccgtgacg cccgcaccgg cccccgcgcc gaagctcaag ctccgcgtcg tgacgggctc
      181 gcccgaagga tttctcgcga actcgacgct ggtcacgggc gacaaagacg ccgtgctcat
      241 cgacgcgcaa ttcacgatcg ccgacggcaa gcgtgtcgcc gacgccgtca aagagagcgg
      301 caagaacctg acgctcgtct acgtcacgca cagccacccg gaccactact tcggcttcgt
      361 gtcgatcaaa gaagcgttcc cgaacgcgaa gctcgtcgcg ttgcccgcga ccgtcgccga
      421 aatccaaaag acctgggaag ccaaggtgaa gcagtggaag ccgctctaca aagagaccat
      481 caccgcgaaa cccttcttgc cggacgcgat gagcagcacg acgctcgagc tcgaaggcca
      541 aaaactcgaa gtcacgggcg gcgttcaggg cgacgagtcc gaaaattcct acgtctcgat
      601 tccgtccctg cacgcgctcg tgacaggtga cgtcgtttac gaccaggttt tcccctggac
      661 cgccgagacg acgccggaac agcgcaaaac gtgggaaggc gccctcgacc acctcggcac
      721 cctgaccgcg accgtcatcg ttcccggaca tcagaaaccg gagcgccagc aaaaccccga
      781 cgacctcgcc ttcacgaaaa actacctgat cgctttcgac gaggcgatcg ccacctccaa
      841 gaagccggcg gaactccagg ccaaaatgaa ggcgaagtac cccgacgccg ccctcgacgt
      901 gatcttgaag ctcggcgccg aagcggcctt caagaaagcc cccaagaagt agcgcataca
      961 agcgaaggga tgggcgacgc tacaagcctg tactaagcgg aggtgaatga gcgcgctcga
     1021 gcggtcggta gccgcctcgc cggccgcccc ggcgacgggc gtcgacgcta gcgcgatcga
     1081 ccgcgcgatg agtcgttacg ccgacggcga cgatcgcgcg ttcggcgaag tgttcgaagc
     1141 gctcgccccg cggctgcacg cgttcttgcg ccgcctctcc ggctccgaag agctcgctgg
     1201 cgatctcgtg caggagacgt ttttacgcat gcaccgggcg cgcggctcgt tcgcgcggag
     1261 cggcgccgtg ttgccctggg cctacgccat cgcgcgcaac tgctacgtga cgcacacgcg
     1321 ttcgttcaag acgaaagtct cgcgcgcgag catcgacatc caggagcacg aagtgccgac
     1381 cggcctcgag acgaacgccg aagaggccgc ctccgcgctc gaacgtgcgg ccatcgtcga
     1441 acgcacgctc gcccgcatgt ccgaggcgaa tcgcgaagcg ttcattttga ttcgcttcga
     1501 aggccagagc gtggcgaacg ccgcacagat cctcggcgcg agcgagagcg cggtgaagct
     1561 tcgtgccttt cgcgcctacg aacaactgcg ggaggcgctc ggccgcccat gaccaccccg
     1621 agcgaagaag agctgctcgc gcggctcggc gaaatcccgg accgcgcccc gcccggcctg
     1681 cgtccgctac cgcgcttgcc tgccctgccc cgcgcggcgg tgcgagacga gacgcgccgc
     1741 cgccggctgt tggcgctcgg tgcgagcgtg ctctggctcg gttcgaacct cgcgctcctc
     1801 ggcttgcgca aagacctggg cgagttgccg tcgccgtacc tacaagccga ggtcgtgctc
     1861 cctt
//
LOCUS       DATIML010000780         6149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3339402, whole genome shotgun sequence.
ACCESSION   DATIML010000780 DATIML010000000
VERSION     DATIML010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6149
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3339402"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VLJ38_13385"
     CDS             complement(<1..557)
                     /locus_tag="VLJ38_13385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40563.1"
                     /translation="MKSIARWLTAAFMVGCSSTPDTAVEAGRTSEEELAVNAPPGPED
                     GLADAFGNFLEIFTGNNLDAQFTLSFAFNLGLCTDKVKGDSGALASGQATLDLNTGDV
                     TATLNNVPATGGFELWLVKNVAGGTVAPEATDQMLKLGKFTTKGPTRTLTASVGTDVT
                     FDFDLIVVTRAGKTPDKSVVAAGDRT"
     gene            937..1536
                     /locus_tag="VLJ38_13390"
     CDS             937..1536
                     /locus_tag="VLJ38_13390"
                     /inference="COORDINATES: protein motif:HMM:NF012535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thaumatin family protein"
                     /protein_id="HSU40564.1"
                     /translation="MTTRGSVDCAHDGDGMTTLAFVNGCDHSVIFAGSDLDGGSLVPG
                     AVRCVDIGSAAEGLAAKRYWGYGGNDPGAGHYSLAEFTFNTDFHDFDWYDVSFVDAFN
                     LPLGITPLSRPDCQVLACADDFLAGCPAVGQLRQNGELVACVSPERDNGDSPVAQYFE
                     GCDDAYAWSADDQHGSDPSPTHACAGEDFAVTFCPDAKP"
     gene            1533..2939
                     /locus_tag="VLJ38_13395"
     CDS             1533..2939
                     /locus_tag="VLJ38_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_159397871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2403 domain-containing lipoprotein"
                     /protein_id="HSU40565.1"
                     /translation="MSLRARERIWGVVTVASVLATSAGACGGGETASHGGSGEAQSAG
                     RPNSGAPSSGREASGTAGAFSGAPSSGGEPSGTAGGTAGAPPAGGQAGSDALGPHPFL
                     ASTVTRGGTMTFTNVGAAGFWPRRIDRAAGDPGCDYKDGTDTWGGHCCMTEHQTDAVE
                     LSPFDSEMTLILKAINVRQLAVYQPASAAAGADWRRVTAWDDRTRASQNLWFTQQGDG
                     STIFPGDLTDDDCVGYLTQAPVFPCGDGRDYYCPNDPGILHQGFSGSKLVVLLASMTF
                     DDTQVKSCSGSGTASPSPWVAFVASELTRDGGRKYNGACNCYSRTGSVGDGCGEINVF
                     EVVMDNNDYSNREFASTGVRSFQAGHVGGAVCQASCDRDAFPDDSDVVDACAKTAYDT
                     APEILVGGSTTGCPVWRRPLGDRYLFILLDQSSRTIQVGMIHPANIPSAAAPLLPALP
                     ATLARSAVAGMLALRLPQ"
     gene            complement(2968..3231)
                     /locus_tag="VLJ38_13400"
     CDS             complement(2968..3231)
                     /locus_tag="VLJ38_13400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40566.1"
                     /translation="MADLPWQTQVAALLEQAAQALRTGSRRRAIVALGTAVAYVQRAR
                     EQGDRFAQELIAHTIESPKDDPTERFTFKPGELEALTSSNGKK"
     gene            3695..>6149
                     /locus_tag="VLJ38_13405"
     CDS             3695..>6149
                     /locus_tag="VLJ38_13405"
                     /inference="COORDINATES: protein motif:HMM:TIGR01733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HSU40567.1"
                     /translation="MSLVPDHVQDRESDLTSFADLSGLNAYLRQLLDGFDAATAAPGA
                     EPNGRRSSLRGFGQLDYPLAPEVARELFAVSARHQLATHSVLRAAWAVLVARYSGDND
                     VLFGVATRADQALDDASRAVLPFRVRVPGDLCVRDFLTTVHALCLAGRPYEDVELLEV
                     EGELALRSLMLESVLRVDWRAPSAAYSREARDAVRAPERSAPLELHVLGQLEGEVSLR
                     LSFDRSRFRAGMAERLVDAFVFVLEQLLTNDERLLHRVHVLRPEARHRLVTAFNATER
                     DFPRQLLIHERFEQQARARPDAIAVETQTSSVSYRELEALANRLAHALRARGAGPGVR
                     IAICLERGVLLVAAMLAVSKSGAAYVPLEPAYPAERLQRIVSDAAPAVVVTEASCADR
                     FASELLFADALELATLPATPPELVATSEDDCYVIYTSGSTGAPKGVVLQHRAVTNTCE
                     WVTREFGIGPGDRLLFVTSACFDLSVYDVFGALGAGATVVVAEQRLLADAAALGRAVH
                     ERNVTIWNSAPAVLELVMPFVARAPLSGRLRLVMLSGDFIPLALVALVKSTFPCAKLI
                     SLGGATEAAIWSNFYPVGELEPDWVSVPYGRPLQNCRYYALDARLEPVPLGAVGELCI
                     GGECLARGYLNQPELTAAKFVPNPFSDAPGDRLYRTGDLVRYFEDGNLEILGRADGQV
                     KIRGYRVELLEIEAALLALAGVAQAVCIATKLDSSGHRSLVAYVVPKAGATLSELGIK
                     RDLAQALPEFMLPARVALLGALPLSANGKLDRTALRAPDEFVPLAEASVPPFTETERV
                     VAESWGRILNRSAIGRDDDF"
BASE COUNT          943 a         2013 c         2087 g         1106 t
ORIGIN      
        1 gtgcgatcgc cggcagctac gactgatttg tccggagtct tgccggcgcg cgtgacgacg
       61 atcaggtcga aatcgaacgt cacgtccgtt ccgacggaag ccgtgagggt gcgcgtcggt
      121 cccttggtcg tgaactttcc aagcttgagc atctgatcgg tcgcctcggg cgcgacggtg
      181 ccaccggcga cgttcttgac gagccaaagc tcgaagccgc ccgtcgccgg aacgttgttg
      241 agcgtggccg tgacgtcccc ggtgttcagg tcgagggtcg cctgtccact cgctaaagca
      301 ccgctgtcgc ccttcacctt gtcggtgcaa agcccaagat tgaacgcaaa gctcagcgtg
      361 aattgcgcgt cgaggttgtt gccagtgaag atctcgagaa aattgccgaa cgcgtccgct
      421 aggccatctt cagggcccgg cggcgcgttg acggcgagct cttcttcgct ggtgcgacca
      481 gcttctacgg ctgtgtcggg cgttgatgag caacccacca taaatgccgc tgtaagccac
      541 ctggcaatcg atttcatgag cgacctcccg tgtggccaag gcaaatcact ccagcgagcg
      601 actttcgccc caaggatctt gccggccggc aaaatcggcg atcgacggaa acccgctcgg
      661 gtgtaagctt gtcgtttgtg gcgaccgctt agacaagcag atttggccgt tgctgctcga
      721 gcgagaatcc gactgcgtgg cgtccgtcac gcggtgctga tggtattttt catcgcgtgc
      781 ggccccagca ggtcgactga cgccgggtcg cacgcggacg cgccgaacgc gcgcggcgga
      841 acgtcatcga gcggcggaac gtcatcgagc ggcggaggcc tcgggggtca gtcaggccgg
      901 gccgggacgg tgtccggcgg catgtccgct ggcggcgtga ccacgcgagg ctccgtggac
      961 tgcgcgcacg acggcgacgg aatgacgacg ctcgccttcg tcaacggctg cgaccatagc
     1021 gtgatctttg caggcagcga tctcgacggc ggctcactcg ttcccggcgc cgtccgctgt
     1081 gtcgacatcg gcagcgcggc cgaagggctc gcggccaaac gctactgggg ctacgggggt
     1141 aacgatccgg gcgcgggcca ctactcgctc gccgagttca cgttcaacac cgactttcac
     1201 gacttcgatt ggtatgacgt aagcttcgtc gatgcgttca atctgccgct cgggatcaca
     1261 ccgctctcgc gtccggactg ccaggtgctc gcgtgcgccg acgactttct cgccggctgt
     1321 cccgccgtcg ggcagttgcg acaaaacggt gaactggttg cgtgcgtgag cccggagcgc
     1381 gacaacggcg atagcccagt cgcgcaatac ttcgagggct gtgacgacgc ctacgcgtgg
     1441 tctgccgacg accagcacgg cagcgatccg agtccgacgc atgcgtgcgc gggagaggac
     1501 ttcgcagtga cgttttgccc ggacgcaaag ccatgagcct ccgcgcgcgg gagcgcattt
     1561 ggggcgtcgt cacggtcgcg agcgttcttg cgacgagcgc cggcgcgtgt ggcggcggcg
     1621 aaacggcgag ccacgggggg tcgggtgagg cgcagagtgc gggaaggccg aatagcggtg
     1681 cgccgagctc gggcagggaa gcgagcggca cggcgggtgc gttcagcggt gcgccgagct
     1741 caggcggcga accgagcggt acggcgggtg gcactgccgg cgcgcccccg gcgggcggcc
     1801 aagcgggcag cgatgcgctc gggccacacc cgtttctcgc atcgacggtc acgcgcggcg
     1861 gcacgatgac gttcacgaac gtcggtgctg ccggcttttg gcctcgtcgc atcgatcgcg
     1921 cggcgggcga tccaggctgc gactacaaag acggcaccga cacctggggt ggccactgct
     1981 gcatgacgga gcaccagacg gacgccgtcg agctctcgcc cttcgactcg gagatgacct
     2041 tgatcttgaa ggcgatcaac gtcaggcagc ttgccgtcta tcaaccggcg agcgccgcgg
     2101 cgggtgccga ctggcggcgg gtgacggcgt gggacgaccg cacgcgcgct tcacaaaatc
     2161 tctggttcac tcagcagggc gacggcagca cgatcttccc gggcgatctc acggatgacg
     2221 actgtgtcgg ctatctcacc caagcaccgg tgttcccgtg cggcgacggc cgcgactatt
     2281 actgtccaaa cgatccaggc atcttacatc agggcttctc gggctccaag ctcgtggtct
     2341 tgctcgcctc gatgacgttc gacgatacgc aggtgaaatc gtgtagcggt agcggcacgg
     2401 ccagcccgag tccgtgggtc gcgttcgtcg cgtccgagct cacgcgcgac ggtggtcgca
     2461 agtacaacgg agcgtgcaac tgctactcgc ggacgggcag cgtcggtgac ggctgcggtg
     2521 aaatcaacgt cttcgaggtc gtgatggaca acaacgacta ctcgaaccga gaattcgcga
     2581 gcacgggcgt gcgatcgttc caagccggcc acgtgggagg cgccgtctgt caggcgagct
     2641 gcgatcggga tgcattcccc gacgacagcg acgtagtcga cgcctgcgcg aagaccgcct
     2701 acgacaccgc gcccgagatc ttggtgggag ggagcaccac gggctgccca gtctggcgtc
     2761 gccctctcgg cgatcgctac ctcttcatcc tgctcgatca gagctcgcgc acgattcagg
     2821 tcgggatgat ccacccggcc aacattccga gcgcggcagc gccgctcctg cccgcgctgc
     2881 cggctaccct cgcgcgctcg gccgtcgctg ggatgctcgc gctgcggttg ccgcagtagt
     2941 ctcccgccgt agcacgaccg agctcggcta tttcttgccg ttcgaggacg tgagcgcttc
     3001 gagctcgccc ggtttgaagg tgaagcgctc ggtggggtcg tctttcgggc tctcgatggt
     3061 gtgcgcgatg agctcctggg cgaagcggtc gccttgctcg cgcgcgcgct ggacgtaggc
     3121 gacggcggtc ccgagcgcga cgatcgcgcg ccgccgactg ccggttcgca gtgcttgcgc
     3181 cgcctgctcg aggagcgcgg cgacttgggt ctgccacgga aggtccgcca tcgatcgaag
     3241 tcgcttagag tagcacgtgc gcgctgcttg ccggaaacgg cgcgggacgc gtctcttcgg
     3301 agctacttgc cggctatccc ccccgaggag ctagcggtcc cgccgtgtcg ctgccgccgc
     3361 tcgaattcgt gccgccggtg ctcggaatcg cgccgccgaa cccggtcgcg tgccgatcgc
     3421 ggacggtagg gctgcgtggg gtggaaacct ggacgccaca tcaaaccgac gggggagcga
     3481 actcatgttc ttgcgtcggt ggagtcgggt cgtccgtggc ggattgccgc gatggccgtc
     3541 tgcagatcgt ctacgagcac gtggcaagcg cgaccgctgc ggtgatatct ttcgagcatt
     3601 ggagggcgtc gaatggatct cgtcgtggcg catcgaaggt tcgcagaggt caccgagcgt
     3661 cacgtagggt ccatgctagc ccgcctgatt gacgatgtct ttggtacctg accacgtcca
     3721 ggatcgtgag agcgacctca cttccttcgc ggacctatca ggactgaacg cttaccttcg
     3781 ccagttgctc gacggcttcg atgctgcgac tgcggccccg ggtgccgaac cgaacggcag
     3841 gcgctcgtcg ctgcgtggct tcggtcagct cgattaccca ctggcgccgg aggtcgcgcg
     3901 tgagctcttc gccgtcagcg cgcgacatca gctcgcgacc cactccgtac ttcgtgcagc
     3961 gtgggcagtg ctcgtcgcgc gctacagcgg cgacaacgac gtgttgttcg gtgtcgcgac
     4021 gcgagccgat caggcgctgg acgacgcaag ccgagcggtg ttgccgttcc gggtgcgtgt
     4081 cccaggcgat ctgtgcgtgc gcgactttct gaccactgtt cacgctctct gccttgccgg
     4141 ccgtccttac gaagacgtgg agctgctcga ggtcgaaggc gagctggctc tgcgctcgct
     4201 catgctcgaa agcgtgctgc gcgtcgattg gcgcgcacct tcggctgcgt actcgcgcga
     4261 agcgcgggac gccgtgcggg cgccggaacg cagcgcgccg ctcgagctcc acgtcctcgg
     4321 acagctcgag ggtgaagtct cactccgcct ctcgttcgac cgcagtcgct ttcgcgccgg
     4381 tatggccgag cgtctcgtcg atgccttcgt gttcgtgctc gagcaactgc tgacgaacga
     4441 cgagcgcctg ctccaccgag ttcacgtact caggcccgaa gcccgacatc ggctcgtcac
     4501 ggccttcaat gcgacggagc gcgactttcc gcggcagctc ctgattcacg agcggttcga
     4561 gcagcaggcg cgcgcacgcc cggacgcaat cgccgtcgaa acccagacct cgagcgtgag
     4621 ctaccgcgag ctcgaggcgc tcgcgaatcg gctggctcac gcgctccggg cacgcggcgc
     4681 ggggcccggt gtgcgcatcg cgatctgtct cgagcgcggc gtgctgctcg tggcggccat
     4741 gctcgccgtg tcgaagagcg gggcggcgta cgtgccgctc gagcctgctt atcccgccga
     4801 gcgtctgcag cgaatcgtga gcgacgcggc gccggccgtc gtcgtcacgg aggcttcctg
     4861 cgcggaccgt ttcgcgagcg agctgctctt cgcggacgcg ctcgagcttg cgaccttgcc
     4921 ggcgactcca cccgagctcg tcgcgacgtc cgaggacgac tgctacgtga tttacacttc
     4981 gggcagcacc ggagcgccga agggcgtcgt gctccagcat cgcgcggtca ccaacacttg
     5041 tgagtgggtg acgcgcgagt tcggcattgg tcccggcgac cggctgctgt tcgtcacgtc
     5101 agcctgcttc gatctatcgg tttacgacgt gttcggtgcc ctcggtgccg gagcgacggt
     5161 cgtcgtcgcc gagcagcgcc tgctggccga tgccgctgcg ctcggcaggg cagtgcacga
     5221 gcgtaacgtg acgatctgga actcggcgcc tgccgtgctc gagctcgtga tgccgttcgt
     5281 ggctcgggcg ccgctgagtg gacggctgcg tctcgtcatg ctgagcggag acttcatccc
     5341 gctcgcgctc gtggcgctcg tgaaaagcac cttcccgtgc gcgaagctca ttagcctcgg
     5401 gggcgccacc gaggcggcaa tctggtccaa tttttaccct gtcggcgagc tcgaacccga
     5461 ctgggtcagc gtgccgtacg ggcgaccgct ccagaattgt cgctactacg cgctcgacgc
     5521 gcggctcgag cccgttccgc tcggcgccgt cggcgagctt tgcatcggcg gcgagtgcct
     5581 tgcgcgtggc tacttgaacc agcccgagct cacggcagcg aagttcgtgc ccaatccgtt
     5641 cagcgacgcg ccaggcgacc gcctgtatcg cacgggtgat ctcgtgcggt acttcgagga
     5701 cggcaacctc gagatcctcg gtcgcgcgga cggtcaggtc aagatccgcg gctatcgcgt
     5761 cgagctcttg gaaatcgagg ctgccctgct cgcgctcgcc ggcgtcgcgc aggccgtgtg
     5821 catcgcgacc aagctcgaca gctccggcca ccgctcgctc gtcgcttacg tcgtgcccaa
     5881 agccggcgct acgctgagcg agctcggcat caagcgcgac ctcgcgcagg cgctgcctga
     5941 gttcatgctt ccggcccgcg tcgcgttgct cggcgcgctg ccgctctccg caaacggcaa
     6001 actcgaccgc acggctttgc gcgctcccga tgagttcgtc cctctagccg aagcgagcgt
     6061 tccgccgttc accgagaccg agcgggtcgt ggcggagagt tggggccgaa tcttgaatcg
     6121 cagtgcgatc ggccgcgatg acgacttct
//
LOCUS       DATIML010000781         2519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3339440, whole genome shotgun sequence.
ACCESSION   DATIML010000781 DATIML010000000
VERSION     DATIML010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3339440"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..826
                     /locus_tag="VLJ38_13410"
     CDS             68..826
                     /locus_tag="VLJ38_13410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSU40568.1"
                     /translation="MNRFLLVLALAFGLLGSAVPARAEGDPDVFARVVVAETELRAGP
                     GVSYRVIHRAHRGDTFLIRTRETSGYWLEVLLPDGRSAFALGDTVEAMAVDSDTPDAP
                     SKPGLFAPPALEDAHAGLALMGGVWNGSGYSELRPALVIAPAIAFEPYVGLSLQTDSR
                     RLIYGGAFALNLAPDWALAPFVVLGAGGMHETPKEENIREQRSWFHARVGGGLLVSLR
                     FRLLLRLEASDFVLFTEDRYKNVQSYVGGLGSYF"
     gene            835..1053
                     /locus_tag="VLJ38_13415"
     CDS             835..1053
                     /locus_tag="VLJ38_13415"
                     /inference="COORDINATES: protein motif:HMM:NF025452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4266 domain-containing protein"
                     /protein_id="HSU40569.1"
                     /translation="MANTLRFSLLVLLSFGAFACATVRPEQRAVLADPTMRFEGEPGE
                     QAAVEHVLENREASFGGGSVRGGGCGCN"
     gene            1044..2297
                     /locus_tag="VLJ38_13420"
     CDS             1044..2297
                     /locus_tag="VLJ38_13420"
                     /inference="COORDINATES: protein motif:HMM:NF023516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3570 domain-containing protein"
                     /protein_id="HSU40570.1"
                     /translation="MQLTGGFPSVRSLVALGTASAVFASAPSAAAQVAQADLHTSAFV
                     EPSKTSHLTVITPAANVAVQPTEFLDVHAAYTADIVTGATEAIKAGPVADVVTAATKF
                     SDVRHQFGGGVAVTRKDTHLGVDYSYGTESDYRSQSFAVSAGTEFFQKNTQIELQYAR
                     GFDKVCTTNYAPSTAPSGRARLDSSKGCFTKTPDRASRDVDLDTLQAAWTQAWTPVFA
                     TQAVLTGALQHGFLANPYRGVVITPSGEDALENHPENRARGALSVRGKYFIKPIGAAA
                     SAGVRLYRDTWDIFGQTYEVEFEKYVLPALRVLVHGRYYHQNGALFWSDDYTGGEPAA
                     GPRGQYWSGDRELSPLSSYLVGGRVLVAVQGTPDHRVLAVLLRLQGTAGLDILKTNLK
                     DFTWSGKKPDDTLAGMLSLGLRGEF"
BASE COUNT          398 a          842 c          846 g          433 t
ORIGIN      
        1 aagtgttcga tgaaaacagc gacgcggccg ccgtcattcg ggagtgggcg agccacgtga
       61 cgacgcaatg aaccgattct tgttggtcct ggcgctcgct ttcggcttgc tcggcagcgc
      121 agtgcccgcg cgcgccgagg gcgaccccga cgtctttgcg cgtgtggtcg tggccgagac
      181 ggagctgcgc gcggggcccg gcgtgagtta ccgcgtgatc caccgcgcgc atcggggcga
      241 caccttcctc atccgcacgc gcgaaacgtc cggttactgg ctcgaggtgc tcctgcccga
      301 cggtcgcagc gccttcgcgc tcggcgacac cgtcgaggcc atggccgtcg acagcgacac
      361 gccggacgcg ccgagcaagc cgggcttgtt cgcgcccccc gcgctcgaag acgcgcacgc
      421 aggtctggcg ctgatgggcg gcgtctggaa cggcagcggc tactcggagc tgcgcccggc
      481 gctcgtgatc gcgccagcga tcgcgttcga gccgtacgtc ggcctgtctt tgcaaacgga
      541 cagccgccgt ttgatttacg gcggcgcgtt cgcgctgaac ctcgcgcccg attgggcgct
      601 cgcgccgttc gtcgtgctcg gcgcgggcgg catgcacgag acgccgaagg aagagaacat
      661 ccgcgaacag cgctcgtggt ttcatgcgcg cgtgggcggc ggactgctcg tctcgctgcg
      721 ctttcgcttg ctcttgcggc tcgaagcgtc ggatttcgtc ctttttaccg aggatcgcta
      781 caagaacgtc cagagctacg tcggcggtct gggctcgtat ttttgaggca agacatggcc
      841 aacactctcc gcttctcgct gctcgtgctg ctctcgttcg gtgcgttcgc ctgcgcgacg
      901 gtccgtcccg aacagcgcgc agtgctcgcg gacccgacga tgcgcttcga gggcgagccg
      961 ggcgagcaag cggccgtgga acacgtgctc gaaaatcgtg aggcttcttt cgggggtggc
     1021 tcggtgcgcg gaggcggctg cgggtgcaac tgacgggtgg atttccgagc gtgcggtcgc
     1081 tcgtggcgct cggaacggcg agcgccgtgt tcgcgtccgc gccgtccgca gcggctcaag
     1141 tcgcgcaggc ggacctccac acgtcggcgt tcgtcgagcc ctcgaagacg agtcacctca
     1201 ccgtgatcac gccggcggcg aacgtcgcgg tgcagccgac ggagttcctc gacgtgcacg
     1261 ccgcgtacac cgccgacatc gtcacgggcg ccacggaagc gatcaaggcc ggccccgtcg
     1321 ccgacgtcgt cacggcggcg acgaagtttt ccgatgtgcg tcatcagttc ggcggcggcg
     1381 tcgccgtgac gcgcaaggac acgcacctcg gggtcgatta ttcttacggc acggagtccg
     1441 actaccgctc gcagagcttc gccgtgagcg ctggtacgga gttcttccag aagaatacgc
     1501 aaatcgagct gcagtacgcg cgcggcttcg acaaggtctg caccacgaac tacgcgccta
     1561 gcacggcccc atccggtcgc gcgcgtctcg atagctccaa aggctgcttc acgaagacgc
     1621 cggatcgcgc gagccgcgac gtcgatctcg acaccttgca ggcggcgtgg acacaggctt
     1681 ggacgcccgt attcgcgacg caggccgtgc tcactggcgc gctccagcac ggctttttgg
     1741 cgaaccctta tcgcggcgtc gtgatcacgc cttccgggga ggacgcgctc gagaatcacc
     1801 ccgagaatcg cgcgcgcggt gcgctgtccg tgcgcggcaa atacttcatc aaacccatcg
     1861 gtgcggccgc gagcgccggc gtgcggctgt atcgcgacac ctgggacatc ttcggccaga
     1921 cgtacgaagt cgagttcgag aagtacgtct tgcccgcctt gcgcgtgctc gtgcacggcc
     1981 gctactacca ccagaacggc gcgctcttct ggagcgacga ctacacgggc ggtgaaccgg
     2041 cggcaggtcc ccgtggccaa tactggagcg gtgatcgcga gctgtcgccg ctgtcgagtt
     2101 atctcgtcgg cggccgcgtg ctcgttgccg tccagggcac ccccgaccac cgcgtgctcg
     2161 ccgttctgct ccgtttgcaa ggcaccgccg gcctcgacat cctcaagacg aacctcaagg
     2221 acttcacgtg gagcggcaaa aagccggatg atactttggc agggatgtta tcgctgggct
     2281 tgcgagggga gttctaggcg cggaggctcg cccgcatcga gccgcgcccg gaacgcttcc
     2341 gtaagcagtc ccccaggtcg tgagactaac ggcggcgaag ccgccccgcg acgacgtggg
     2401 agtcttggca gaccagatca cgatcgcccg gagtcgcgat tacccaacgc aaatgccggc
     2461 gaacccggcg gtgggtctcg ttgctcgcgt cagacgccaa tcgccaggcg agcaatccg
//
LOCUS       DATIML010000782         1888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_163535, whole genome shotgun sequence.
ACCESSION   DATIML010000782 DATIML010000000
VERSION     DATIML010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163535"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1335
                     /locus_tag="VLJ38_13425"
     CDS             <1..1335
                     /locus_tag="VLJ38_13425"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU40571.1"
                     /translation="LGLITAAVVVLYVIAPSQRAALPLAGLLAIAVALATAGMAARLV
                     ARAASELAQVARGIAAGNLEIRSQSNAEGELGDLGRALDRVAEELATTLTELTVERDR
                     LRGVLTGMEEGVLLLDERGHIALINAALREMLLLGNDAVGRTQLEAIRHADLKELIDH
                     ARDGAEPVTGEIETGGLKPRRLLVRAAQLPGNEEQVFAVFVDVTEVRKLESMRRDFVA
                     NVSHELRTPVTAIRSAAETLQTTPPEDPEVEAMFIGIVARNAERLHDLVEDLLDLSRI
                     ESQKLKLAPEPLETRAVFEQVASLFRERADRKHVTLVYEAPPGLRVLADRRALEHVLT
                     NLVDNAVKYCGEHSRVVLRSEARDKELCLSVEDEGPGIEERHLPRLFERFYRVDAGRS
                     RELGGTGLGLSIVKHLTEAMGGAVTVMSKPGAGTTFSVTLKKAEPRTARAVA"
     gene            1338..>1888
                     /locus_tag="VLJ38_13430"
     CDS             1338..>1888
                     /locus_tag="VLJ38_13430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HSU40572.1"
                     /translation="MPARSGSLGLGYGSKLSGDAVFSRITRFFALVVIVGLGAMALEM
                     AAASAPTLRAFGFDFVLGRVWDPLHRVFGALPFIYGTLVSSLLALVIAVPVSFGVAIY
                     LSELAASWQRDLLGFLVELLAAVPSVVYGLWGVFALAPWLRTSVEPALAKSFGFLPLF
                     QGTTHGFGMLAGGVVLSIMILPT"
BASE COUNT          261 a          626 c          666 g          335 t
ORIGIN      
        1 ctcggcctga tcacggcggc ggtcgtcgtc ctctacgtca tcgcgccctc gcaacgggcg
       61 gcgctgccgc tcgcgggact cttggccatc gccgtcgcgc tcgcgaccgc cggcatggcc
      121 gcgcgtttgg tggcccgcgc cgcgtccgag ctcgcgcagg tcgcgcgcgg catcgcggcg
      181 ggcaatctgg agattcgttc gcaatcgaac gccgaggggg agctcggtga cctcggacga
      241 gccctcgacc gcgtcgccga agagctcgcg acgacgctca ccgagctcac cgtcgagcgc
      301 gatcgcctgc gcggcgtgct gaccggcatg gaggagggcg tgctcctgct cgacgagcgc
      361 ggacacatcg cgctcatcaa cgccgcgctc cgggagatgc tcttgctcgg caacgacgcc
      421 gtagggcgca cgcagctcga ggcgatccgt cacgccgact tgaaggagct catcgatcac
      481 gcgcgcgacg gcgccgagcc cgtcacgggc gagatcgaaa ccggcggact caagccccgg
      541 cgcctgctcg tgcgcgccgc gcagctcccc ggcaacgaag agcaggtgtt cgccgtgttc
      601 gtcgacgtga ccgaggtgcg aaagctcgag tcgatgcgcc gcgatttcgt ggcgaacgtc
      661 tcgcacgagc tgcgcacgcc cgtgacggcc attcgctcgg cggcggaaac gttgcaaacg
      721 acgccgcccg aagatcccga agtcgaagcg atgttcatcg gcatcgttgc gcggaacgcc
      781 gagcgactgc acgatttggt cgaagatcta ttggatctgt cgcgcatcga gtcacagaag
      841 ttgaagctcg cgccggagcc gctcgagacc cgcgccgtgt tcgagcaggt cgcgagtctg
      901 ttccgcgagc gggccgatcg taagcacgtg acgctcgtgt acgaggcgcc gcccggtttg
      961 cgcgtgctcg ccgatcggcg ggcgctcgag cacgtgctca cgaacctggt cgacaatgcc
     1021 gtcaagtact gcggcgaaca ctcgcgcgtc gtcttgcgca gtgaagcccg cgacaaggag
     1081 ctctgtctca gcgtagagga cgaagggccc ggcatcgaag agcggcacct gccgcgcctg
     1141 ttcgagcgtt tttatcgcgt cgacgcaggg cgttcgcgcg agctcggcgg tacgggcctc
     1201 ggtctctcga tcgtgaaaca cctgacggag gcgatgggcg gcgccgtcac cgtgatgagc
     1261 aagccgggcg cggggacgac cttcagcgtc accttgaaga aggccgagcc ccggacagcg
     1321 cgggccgtcg cgtgacggtg ccggcgcggt ccggctcctt gggcctcggt tacgggagca
     1381 agctgtccgg cgacgcagtg ttcagccgga tcacccggtt tttcgcgctc gtcgtgatcg
     1441 tggggctcgg cgcgatggcg ctcgagatgg ccgcggcttc ggctccgacg ctgcgggcgt
     1501 tcgggttcga tttcgtgctc gggcgtgtgt gggatccgct gcaccgcgtg ttcggtgcgc
     1561 tgccgttcat ctacggcacg ctcgtctcgt cgctgctcgc gctcgtcatc gccgtgcccg
     1621 tctcgttcgg agtcgcgatt tacttgtcgg agctcgcggc ctcgtggcag cgcgacctgc
     1681 tcgggtttct ggtcgagctc ctggccgccg tgccgagcgt cgtgtacgga ctctggggcg
     1741 tgtttgcgct cgcgccgtgg ctgcgcacgt cggtcgagcc ggcgctcgcc aagagcttcg
     1801 gttttttgcc gttgtttcag gggaccacgc acgggttcgg catgctcgcg ggcggcgtcg
     1861 tgctctcgat catgatcttg ccgacgat
//
LOCUS       DATIML010000783         7435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_453676, whole genome shotgun sequence.
ACCESSION   DATIML010000783 DATIML010000000
VERSION     DATIML010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7435
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453676"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2254)
                     /locus_tag="VLJ38_13435"
     CDS             complement(<1..2254)
                     /locus_tag="VLJ38_13435"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSU40573.1"
                     /translation="MLALFTLGAIGTAHGQAAATSTAPAPSPPVAPDLVPPHLLESGT
                     VPYPEGATGNVVVTLTLVVNRDGTVRSAEVTHGDEPFASVAVAAARDFRFTPATRGGQ
                     PVAATIRFEVEFVAPAPNAEATTPNGSANAPNGAPAANSASSAAPAPPPLKAVTEVVV
                     TGERPAPAVISLGRAEVRQLPGAFGDPFRAIEAMPGVTPIISGLPFFYVRGAPPGNVG
                     YYLDGVRVPYLFHVGLGPSIVNPALVDRVDLYPGGYPARFGRYAGGIVSGETTAPRTD
                     FHGEGNVRLFDLGGVLETGFAGGRGTILLGGRYSYTAAALSLVSPDAALDYRDYQARV
                     SFDITPHDRVTAFAFGSYDLLGEKQPQGLRVLFGTEFYRLDTRYDHFYGDDNRVRFAF
                     TLGYDRTRLDVDRNAQDKMLGARVEVTHHLSSKMLLRTGIDGTLDAYKTDRPTYVDPD
                     DPNEALLASLFSSRSDYAFGVYGDVVWDVAPGLEVTPGLRADLFQSSGTTKPSFDARL
                     AGKVSVTPRLKLIEAFGLAHQPPAFLGPVPALVPATLANGLQTSFQSSAGVELTLPAS
                     ITATTTLFHNAFFNMSDDLGTSRNIDPSNLDQRSLGQAYGFEFYARRPLTSKLAGFVT
                     YTLSRSVRSLGNEHFLSAFDRTHVGNVALAYDLGRNWRAGARFMFYSGVPKRPDIPPG
                     LIQPERTTSVEREPGFYRIDLRVEKRWNFKRTGWLSLVFEMLNATFHKETVANTEIGP
                     VTIPSIGVEAG"
     gene            complement(2324..3016)
                     /locus_tag="VLJ38_13440"
     CDS             complement(2324..3016)
                     /locus_tag="VLJ38_13440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU40574.1"
                     /translation="MDALVLIEGLKKSFVHMGRTLEVLRGIDLNVYPGQILAIVGPSG
                     AGKSTLLHCVGTLDLPTSGRIRLGSEELTTMSSSRLAAVRNRDIGFVFQFHHLLPEFT
                     ALENVMMPGLIQGRPRREMEKRAKALLEEVGLLSRATHRPGELSGGEQQRVAVARALA
                     LDPKLVLADEPTGNLDTATSDAIHDLFFQINREHGTTIIVVTHNPAFAERMPRVVRMR
                     DGVVEADENRPV"
     gene            complement(3043..4845)
                     /locus_tag="VLJ38_13445"
     CDS             complement(3043..4845)
                     /locus_tag="VLJ38_13445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU40575.1"
                     /translation="MNELLPLLLLAPATSHASPLDRHTTVSGEQPAFFVRLWESLGLW
                     PRIALFGLVVLALVVLVVWALKQLNRGRWRNLMAGITTVCLAAFTVFGFWAARLPTPR
                     GTYFVLWHQIVRVAAVVTGMGFILGAMALLIPRVFDRFEGQSFVPFIAARHVRSQKSG
                     FLTVISVLSIAGVAVSSFALCIVVAVMGGFGADLKRKILGNNAHVKIEATNGGGFQNY
                     RDLLEDVRKVPGVKAATPVAGGEAMASSSSNTAGVLLRGIDPNSIGDVIDLKKNIEVG
                     RWSYLTDWKRLAELPPDEPIGLGPGGEMYLKGPSLHFESDDKSDDKLDPSVKAAIVPT
                     DAYPGIVLGRELAKTLHVYIGDELTLVSPLGDLGPMGVLPKSRRFHVAAVFYSGMYEY
                     DSSQAYVTLEVAQDFLDLQGRVTTLEVRVQDAERVGDVRAGLAATIKDRPDLRVRDWK
                     ESNRNLFSALQLEKIATFVILSLAILVASFCIICTLLLMVTEKSKEIAVMKALGASDQ
                     TILRIFMSEGMMIGGIGTLLGVVTGLSGALGLLWFGVRLDPDVYYIDRLPISVDPLDF
                     LIVALSALLITTLATLYPALAASRLRPVDGIRYE"
     gene            complement(4842..6518)
                     /locus_tag="VLJ38_13450"
     CDS             complement(4842..6518)
                     /locus_tag="VLJ38_13450"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HSU40576.1"
                     /translation="MESGEEALLLARRQKLERMRQRGQNPYANDLDARDRTLVAELRA
                     KFAPALLDPAELRYDAERVASLAGEERFHVCGRLMARRGFGKASFFRLRDRSGEIQLF
                     AKQDVMGEAFAALEDVDLADHVEVRGRAMVTKTGELSLELAELRVLSKAVRGLPDKWH
                     GMTDPDLRYRRRYVDFVATPEAAAVIRARGIIVQGLRDFLDGEGFLEVETPTLGTLVG
                     GATARPFTTHHNALDLPLFLRVAPELYLKRLLVGGFERVYEIGRCYRNEGISTRHNPE
                     FTLLEFYQAYATYDLLMHTTERLFRHVDAFLSERLERLGFAVDVKHWHAARTFTLAEP
                     FARVPMRESVARSLERASLTSEVLERLEALAFDQKTKTAAHADADGWVALWRTRSPRA
                     NSVDWSNLRRALAACGSAGERLFVAYEYLAEPFLAEDYRSADGSKSLPVFIIDYPAEV
                     SPLARRKDADPAFVDRFELFVDGRELCNAFSELNDPADQEARFLHQVELKQKGNAETM
                     DYDADYILALEHGMPPAAGFGLGVDRFVMALTGQPSIRDVIAFPLMRPEE"
     gene            complement(6586..7176)
                     /locus_tag="VLJ38_13455"
     CDS             complement(6586..7176)
                     /locus_tag="VLJ38_13455"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HSU40577.1"
                     /translation="MHLPVFAPPPIRHAHLGFRCTECGACCRTLRVAVTHHDVRRLVH
                     ATVKAAAELVAWLAPDEVDMTGEPETFVELGLGRRLMVLAQRDGACTLLGPDNRCQAY
                     AARPRDCELFPFDPELAADGALQTLELLPFPACEATSDGSNDAHELAASHVRRERELA
                     DYRQRVRAWNQLALRRRRFGHPVGGSARFLAFLGVG"
     gene            complement(7211..>7435)
                     /locus_tag="VLJ38_13460"
     CDS             complement(7211..>7435)
                     /locus_tag="VLJ38_13460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40578.1"
                     /translation="LADAGPLTPARELSADQRLDELSALLAIGIRRVLAVRADPAAEH
                     VTLEAEAAELLGASDGDLLSVLPLKGGTDK"
BASE COUNT         1241 a         2357 c         2674 g         1163 t
ORIGIN      
        1 agcccgcctc gacgccgatg ctcgggatgg tgacggggcc gatctcggta tttgcgacgg
       61 tttccttgtg gaaggtcgcg ttcagcatct cgaacaccaa cgaaagccag ccggtacgct
      121 tgaaattcca gcgtttctcg acgcgcaggt cgatgcgata aaagccgggc tcgcgctcga
      181 cgctcgtcgt gcgctccggt tggatgagcc ccggcggaat gtcgggtcgc ttcggcacgc
      241 cgctgtagaa catgaagcgc gcgcccgcgc gccagttacg tccgaggtcg tacgcgagcg
      301 cgacgttgcc gacgtgcgtg cggtcgaacg cgctcaggaa gtgttcgttg ccgaggctcc
      361 ggacggagcg agaaagcgtg taggtcacga agccggcgag tttgctcgtg agcgggcggc
      421 gcgcgtagaa ctcgaaaccg taggcttggc cgagactgcg ttggtcgagg ttcgagggat
      481 cgatgttccg gctcgtgcct aggtcgtcgc tcatgttgaa aaaggcgttg tgaaagagcg
      541 tcgtcgtcgc cgtgatcgag gccggcagcg tgagctcgac gccggcgctc gattgaaagc
      601 tcgtttgcaa gccgttggcg agcgtggccg gcaccagtgc cggcacggga ccgaggaagg
      661 cgggcggctg gtgcgcgagg ccgaaagctt cgatgagctt gagacggggg gtgacgctga
      721 ccttgcccgc gagtcgtgcg tcgaagctcg gtttggtggt gccgctcgat tggaagagat
      781 cggcacgtag cccgggcgtt acctcgagtc cgggcgccac gtcccagacc acgtcgccgt
      841 agacgccgaa cgcgtagtcg ctgcgcgagc tgaacaaaga ggcgagcagc gcttcgttgg
      901 gatcgtcggg atcgacgtac gtcggacgat cggttttgta ggcgtcgagc gtgccgtcga
      961 tgcccgtgcg gagcagcatc ttcgagctca ggtggtgcgt gacctcgacg cgcgcgccga
     1021 gcatcttgtc ttgcgcgttc ctatcgacgt cgaggcgtgt gcggtcgtag ccgagcgtga
     1081 aggcgaaacg cacgcggttg tcgtcgccgt agaagtggtc gtagcgcgta tcgaggcggt
     1141 aaaactccgt gccgaagagc acgcgcaggc cttgcggctg tttttccccc aagagatcgt
     1201 aagagccgaa ggcgaacgcc gtgacgcggt cgtgcggcgt gatgtcgaag ctcacgcgcg
     1261 cctggtagtc gcggtagtcg agcgccgcgt cgggcgagac gagcgagagc gccgccgccg
     1321 tgtaggagta gcggccgccc agcaaaatcg tgccgcgccc gcccgcgaag ccggtttcga
     1381 gtaccccgcc gagatcgaag agacggacgt tgccttcgcc gtggaaatcc gtgcgcggcg
     1441 cggtcgtctc accggaaacg atgccgcccg cgtagcggcc gaagcgtgcc gggtagccgc
     1501 ccgggtagag gtccacgcgg tcgacgagcg cgggattgac gatcgacgga cccagaccga
     1561 cgtgaaagag gtacgggacg cggacgccgt cgaggtagta gccgacgttg ccggggggcg
     1621 cgccacgcac gtagaagaag ggcaggcccg agatgatcgg cgtaacgccg ggcatcgcct
     1681 cgatcgcgcg gaagggatcg ccgaaggcgc cggggagctg gcgcacctcg gcgcgaccga
     1741 gcgagatgac ggcgggggcg gggcgctcgc ccgtgacgac gacttcggtg acggctttca
     1801 ggggtggcgg cgctggggcg gcgctgctcg cggagttcgc cgcgggcgca ccgttcggcg
     1861 cgtttgcgga gccgttcggc gtcgtggcct cggcgttcgg cgcgggcgcc acgaactcga
     1921 cttcgaaacg aatcgtcgcg gcgacgggct gcccgccgcg cgtcgccggc gtgaagcgaa
     1981 aatcccgcgc cgccgccacc gccacgctcg cgaacggttc gtcgccgtgc gtcacctcgg
     2041 ccgaacgcac cgtgccgtcg cgattgacga cgagcgtcaa cgtgacgacc acgttgcccg
     2101 tcgcgccctc cgggtacggc accgtgccgc tttcgagcaa atgcggcggt acgaggtccg
     2161 gcgccacggg cgggctcggg gcgggcgccg tgctcgtcgc cgccgcctgc ccgtgcgcgg
     2221 tcccaatggc gcccagcgtg aagagcgcga gcacggcgac gcgcgcgaaa cgctgcgcaa
     2281 acggtgatgc gagtcgccct atcgcatcaa aaggcacgcc gggtcacacc ggccgatttt
     2341 cgtcggcctc gacgacgcca tcgcgcatgc gcacgacgcg cggcatgcgc tccgcgaagg
     2401 cgggattgtg cgtgaccacg atgatggtcg tcccgtgctc gcgattgatc tggaagaaca
     2461 agtcgtgaat cgcgtcgctc gtcgccgtgt cgaggttgcc cgtcggttcg tcggcgagca
     2521 cgagcttcgg atcgagcgcg agcgcacgcg ccacggcgac gcgctgctgc tcgccgcccg
     2581 agagctcacc gggacggtgc gtcgcgcgcg agagcaagcc gacctcttcg agcagcgcct
     2641 tcgctcgctt ttccatctcg cgccgcgggc gaccttgaat cagtcccggc atcatcacgt
     2701 tctcgagcgc ggtgaactcg ggcaagaggt gatggaactg aaagacgaag ccgatgtcgc
     2761 ggttacgcac ggccgcgagc cgtgagctcg acatggtggt gagctcttcg ctccccaggc
     2821 ggatgcgtcc gctcgtcggc aggtcgagcg tgccgacgca gtggagcagg gtgctcttgc
     2881 cggcgccgct cgggcccacg atggcgagga tctgtcccgg gtagacgttg aggtcgatgc
     2941 cgcgcagcac ctcgagcgtg cggcccatgt gcacgaagct ctttttgagc ccttcgatca
     3001 gaacgagtgc gtccaagttc ggctttcggg aaaaatcgcg cgctattcgt agcggatccc
     3061 gtccacgggg cgcaatcggc tcgcggcgag cgcaggatag agcgtcgcga gcgtcgtgat
     3121 gagaagcgcg gaaagcgcca cgatcaagaa atccaagggg tcgaccgaaa tcgggaggcg
     3181 gtcgatgtaa taaacgtccg gatcgaggcg gacgccgaac caaagcagcc cgagcgcgcc
     3241 ggacaggccg gtcacgacgc cgagcagcgt gccgatgccg ccgatcatca tgccctcgct
     3301 catgaagatg cgtaaaatcg tctgatcgct cgcgccgagc gccttcatca cggcgatctc
     3361 cttgctcttc tccgtgacca tcaagagcag cgtgcagatg atacaaaagc ttgccacgag
     3421 gatcgcgagc gacaaaatca cgaaagtcgc gatcttttcc agctggagcg cgctgaatag
     3481 gttgcggttc gactctttcc aatcgcgcac gcgtaaatcc gggcgatcct tgatcgtggc
     3541 ggcgaggccc gcgcgcacgt cgccgacgcg ctcggcatct tggacacgca cctcgagcgt
     3601 cgtcacccga ccctgcagat ccaaaaagtc ctgcgcgacc tcgagcgtga cgtacgcctg
     3661 gctcgaatcg tactcgtaca tgccgctgta gaagacggcc gcgacgtgga agcgccggct
     3721 cttcggcaag acgcccatgg ggccgaggtc gccgagcggc gagacgagcg tgagctcgtc
     3781 gccgatgtag acgtgcaagg tcttggcgag ctcgcggccg agcacgatgc cggggtacgc
     3841 gtcggtcggc acgattgccg ctttgacgct ggggtcgagc ttgtcatcgc tcttgtcgtc
     3901 gctctcgaaa tgcaggctcg gccccttcaa gtacatctcg ccgcccgggc cgaggccgat
     3961 gggttcgtcg ggcgggagct cggcgaggcg cttccaatcg gtgaggtacg accagcggcc
     4021 gacctcgatg ttcttcttca aatcgatgac gtcgccgatc gagttcggat cgatgccgcg
     4081 caggagcacg cccgcggtat tcgaggagct cgacgccatc gcctcgccgc cggcgacggg
     4141 ggtcgcggct ttcacgccgg gcaccttgcg cacgtcttcc aagaggtcgc ggtagttttg
     4201 gaagccgccg ccgttggtcg cctcgatctt cacgtgcgcg ttgttgccga ggatcttgcg
     4261 cttcaggtcg gcgccgaagc cgcccatcac ggcgacgacg atgcagagcg cgaacgagct
     4321 cacggcgacg cccgcgatgc tgagcacgct gatcacagtc aaaaagccgc tcttttgcga
     4381 gcgcacgtgc cgcgccgcga tgaagggcac gaagctctgg ccctcgaagc gatcgaacac
     4441 gcgcgggatc aagagcgcca tcgcgccgag gatgaagccc atgcccgtca cgacggcggc
     4501 gacgcgcacg atctggtgcc acagcacgaa atacgtgccg cgcggcgtcg gcaagcgcgc
     4561 cgcccagaag ccgaagacgg tgaaggcggc gaggcacacc gtcgtgatgc cggccatcag
     4621 gtttcgccag cggccacggt tcagctgctt gagcgcccag acgacgagca cgacgagggc
     4681 gagcacgacc aagccgaaca gcgcgatgcg cggccagagc ccgagcgact cccagagccg
     4741 gacgaagaac gcgggttgtt cgccgctcac ggtcgtgtgg cggtccaggg gcgacgcgtg
     4801 cgacgtagcg ggcgcgagca acagcagcgg caagagttcg ttcattcttc gggccgcatc
     4861 agagggaacg cgatcacgtc gcggatcgac ggttggcccg tgagcgccat cacgaagcgg
     4921 tcgaccccga gcccgaaccc ggctgcggga ggcatgccgt gctcgagcgc gaggatgtag
     4981 tccgcatcgt aatccatggt ctcggcgttg cccttctgtt tgagctcgac ctggtgcaaa
     5041 aatcgcgctt cctggtcggc aggatcgttg agctcgctga acgcgttaca gagctcgcgg
     5101 ccgtcgacga agagctcgaa gcggtcgacg aacgcgggat cggcgtcttt tctacgcgcg
     5161 agcggcgata cctcggccgg gtaatcgatg atgaagaccg gcaggctctt cgagccgtcg
     5221 gcgctccggt aatcctcggc gagaaacggt tcggcgaggt actcgtaggc gacgaacagc
     5281 cgctcgcccg ccgagccgca cgccgcgagg gcacgccgca agttcgacca atcgacgctg
     5341 ttcgcgcgcg gcgagcgcgt gcgccagagc gcgacccagc cgtcggcgtc ggcatgcgcc
     5401 gcggtcttcg tcttttggtc gaacgcgagg gcctcgagcc gctcgagcac ctcgctcgtg
     5461 agcgaagcgc gctcgagcga gcgagcgacg ctttcgcgca tcgggacgcg cgcgaagggt
     5521 tcggcgagcg tgaaggtgcg cgcggcgtgc cagtgcttca cgtcgacggc gaaaccgagc
     5581 cgctcgagcc gttcgctgag gaaggcgtcg acgtggcgga agagccgctc ggtcgtgtgc
     5641 atgagcaggt cgtacgtcgc gtaagcctgg tagaactcga gcagcgtgaa ctcggggttg
     5701 tggcgcgtgc tgatgccttc gttcctgtag cagcggccga tttcgtagac gcgctcgaag
     5761 ccgccgacga gcaggcgctt caagtagagc tcgggcgcga cgcgcaaaaa caacggcaag
     5821 tcgagcgcgt tgtggtgcgt ggtaaacgga cgcgccgtcg cgccgccgac gagcgtgccg
     5881 agcgtcggcg tttcgacttc gagaaaacct tcgccgtcca aaaagtcgcg caggccctgc
     5941 acgatgatgc cgcgcgcgcg aatgacggcc gccgcttcgg gcgtcgccac gaagtcgacg
     6001 tagcggcgcc gataacgcaa gtcgggatcg gtcatgccgt gccacttgtc gggcaagccg
     6061 cggaccgcct tgctgagcac gcggagctcc gcgagctcga gcgacagttc gccggtcttc
     6121 gtcaccatcg cgcgaccgcg cacctcgacg tgatcggcga gatccacgtc ctcgagcgcg
     6181 gcgaacgcct cgcccatcac gtcctgcttg gcgaacagct ggatctcgcc gctgcggtcg
     6241 cgtagccgaa agaagctcgc cttgccgaag ccgcggcgcg ccatgagccg cccgcagacg
     6301 tggaagcgct cctcgcccgc gaggctcgcg acgcgctcgg cgtcgtagcg gagctcggcc
     6361 ggatcgagca gggcgggcgc gaatttggcg cggagctcgg cgaccagggt gcggtcgcgc
     6421 gcgtcgaggt cgttggcgta ggggttttgg ccccgctgcc gcatgcgttc gagcttctgg
     6481 cggcgcgcca ggaggagggc ttcttcgccg ctttccatgg ggcggcgggg aataccccga
     6541 gggctcgggc gcgtccaggg acgctgccgt ggcacggccg ttcggtcagc cgacgccgag
     6601 aaacgccaaa aaccgagcgc tgccgccgac ggggtgcccg aagcggcgtc gtcggagcgc
     6661 gagctggttc catgcacgca cacgttgccg atagtccgca agctcgcgtt cgcgccgcac
     6721 gtgggaggcg gcgagctcgt gcgcgtcgtt cgagccgtcg ctcgtcgctt cacaagctgg
     6781 gaacgggagg agctcgagcg tttggagtgc gccgtccgca gcgagctcgg ggtcgaacgg
     6841 gaagagctcg cagtcgcgtg ggcgagcggc gtacgcctgg cagcgattgt cggggccgag
     6901 cagcgtgcag gcgccgtcgc gctgcgcgag caccatcagc cgccgcccga ggccgagctc
     6961 cacgaaggtt tcgggctcgc ccgtcatgtc cacctcgtcg ggcgcgagcc aggcgacgag
     7021 ctcggcggcc gccttgacgg tcgcgtgcac gagccggcgc acgtcgtggt gagtgacggc
     7081 gacgcgcagg gtcctgcagc aggcgccgca ctcggtgcag cgaaagccga ggtgcgcgtg
     7141 ccggatgggc ggcggagcga aaactggcag gtgcatgtgg cgtccgcacg aatttgggcg
     7201 cgacgccctt ctatttgtca gtgccgccct tgaggggcaa gacgctcagc aggtctccgt
     7261 cggaagcgcc gaggagctcc gccgcttcgg cctcgagcgt cacgtgctcg gcggcggggt
     7321 cggcgcgcac ggcgagcact cggcggatgc cgatcgccag gagggcggaa agctcgtcca
     7381 gccgttggtc ggcacttagt tcgcgggcag gcgtgagtgg gccggcgtcg gccag
//
LOCUS       DATIML010000784         4426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2184693, whole genome shotgun sequence.
ACCESSION   DATIML010000784 DATIML010000000
VERSION     DATIML010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4426
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2184693"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /locus_tag="VLJ38_13465"
     CDS             complement(<1..728)
                     /locus_tag="VLJ38_13465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40579.1"
                     /translation="MKPRPVLWEWLLLHGESPLRRVLAAAAEHDGLGRDAFEFLPSLA
                     FAGRGARAGGRVERIELEPLGRMSAKTRAELASVAGRALALFSWLGVADLHWENLVIG
                     RDRQARIVFAPLDIEMILDDFTSPAETKLVPDADPEYAAINRHAAGLRRVLPYLGKPL
                     SGPLLVTLAGAYRRTLALLDAHAADLADVFDSLPQFRDTPIRVCLRGTDEYVRALSVP
                     PWPPLLDAEATQLARGDIPYFFRL"
     gene            complement(838..2508)
                     /locus_tag="VLJ38_13470"
     CDS             complement(838..2508)
                     /locus_tag="VLJ38_13470"
                     /inference="COORDINATES: protein motif:HMM:NF017722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HSU40580.1"
                     /translation="MERSHGSGAVPGTSAGSGGSGGLVDTGGRGGVNGTSGTSSNVMM
                     GAGMAGSSAPGTGGASSGGNTGASAGGSPSPAGASGSAGSGAAGVPGSSGASSTSGTL
                     SLTIEANPNSVLSCYVSWKTEAPANSVVDFGVAGYQWEISDDKRVTDHRVLVIGMHAA
                     QTYAIKASSGSQSGEGTFMTGQLPAAIPVGKVMINDKTRSQAGWTLMNVEVGGTDNRP
                     RSADPPAAVIYDADGQPVWYFIDGPGVDIGGAVSTQLTDTGVVIGPTWNQNNTNGVPP
                     REVDFAGNIIWECKHAACLPGANVSHHAAKLANGHYVILEYVTKGSLQNPVFRELDAD
                     SKEVWSLDYAALVPPPAGSSGDWCHGNSITIDTEKNEVYANCRWVGLLKTTYQNPTYQ
                     WLIPASYGSKGLGDFTYVPADAQFSDSHDPEFHDDDSTVMFYDNGGWSGSVTGDTSQY
                     HSRAIEYKIDATAKTATPDFEFPGKFPVTDSWYTKDWYSPFWGDVDRLANGNVLITGG
                     EIGPGKESRVFEVTKADGQIVWEFRFPENFGVYRSDRVVPPLVHALPN"
     gene            complement(2738..3535)
                     /locus_tag="VLJ38_13475"
     CDS             complement(2738..3535)
                     /locus_tag="VLJ38_13475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40581.1"
                     /translation="MPIAFWIESFVLLNLAFLGLDIWIAHQANAFERRVEWLPVGFSV
                     AAPLLLAPLVADARHGVKRDVVGLCVGGASVAIGVLGTLFHLQSGFFEQQTLHGLVYA
                     APFVAPLSYVGVGLLLLLNRLERTETLEWARWLLFLAAAGFAGNLGLSLLDHAQNGFF
                     RASEWLSVTGAAFGTSFLACVVARPERLALRRATAWVMGAEAIIGFIGFTLHVHADLV
                     LRPGSSLTERLVYGAPAFAPLLFTNLAGLAALGLLSVERSLATEPER"
     gene            complement(3577..>4426)
                     /locus_tag="VLJ38_13480"
     CDS             complement(3577..>4426)
                     /locus_tag="VLJ38_13480"
                     /inference="COORDINATES: protein motif:HMM:NF024839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="multiheme c-type cytochrome"
                     /protein_id="HSU40582.1"
                     /translation="ASDFSPEQLALGERYHPGWLKRAGNAVGALEGPAALASGCDSCH
                     AVGKPNADGSFGSCTNCHARHVASVALAREPTTCGQCHMGPDHSQLEIYTESKHGALF
                     AAQHEHMNLAADPKHLTTADMPVPTCATCHMSGLEGMKMTHDTTERLSWFLFAPVSTK
                     RPAADRGQAEMKDLCTKCHEHSRIDAFYAAAEAVVAATNQKVQAATAVVAGLRKDGKL
                     TPEPFDEPIEFLEFDTWHYFGRTAKHGAFMGGADFVQWHGNYELLRHQVELDHLAAEI
                     RAQPKL"
BASE COUNT          741 a         1432 c         1495 g          758 t
ORIGIN      
        1 tagaggcgaa aaaaatacgg aatgtcaccg cgtgcgagct gcgtcgcttc ggcgtcgagc
       61 aggggcggcc acggcggcac ggagagcgcg cgcacgtatt cgtccgtgcc gcgcaagcac
      121 acgcggatcg gcgtgtcgcg gaactgcggc aggctgtcga aaacgtccgc gaggtccgcc
      181 gcgtgcgcgt cgaggagcgc gagcgtgcgg cgatacgctc ccgcgagcgt gaccaggagt
      241 ggcccactga gcggcttgcc caaatacggc agcacccgcc gcaagcccgc agcgtggcga
      301 ttgatcgcgg cgtactcggg atcggcgtcc gggacgagct tcgtttcggc gggcgacgtg
      361 aagtcgtcca agatcatttc tatgtcgagc ggcgcgaaca cgatgcgagc ctggcgatcg
      421 cggccgatca ccaggttctc ccagtgcaag tccgcgacgc ccagccaact gaagagcgcg
      481 agcgcccgtc cggccacgct ggcgagctcc gcgcgtgtct tggccgacat gcgcccgagc
      541 ggctcgagct cgatgcgttc cactcgtccc ccggcccgcg cgcccctacc tgcgaacgcg
      601 agcgacggca aaaactcgaa tgcgtcgcgc ccgagtccgt cgtgctccgc ggcggctgcg
      661 agcacacgac ggagcgggct ctcgccgtgg agcagcagcc attcccaaag cacgggacgc
      721 ggcttcacga tcgcgtcgcc tcgcagcgaa acgcgcctgc cgaaattgtg ggaatcgccg
      781 agcgggcgag gaatcaagct gaagctcccg gctcgccgag ggtgagcgca gaggaactca
      841 gttcgggagc gcgtgcacga gcgggggaac gacgcggtcg gagcggtaga ccccgaagtt
      901 ctccgggaag cggaactccc acacgatttg accgtcggct ttcgtgacct cgaagacgcg
      961 gctttctttg ccgggcccga tttcgccgcc cgtgatgagg acgttgccgt tggcgagccg
     1021 gtcgacgtcg ccccagaacg gcgagtacca gtctttcgtg taccagctgt ccgtcaccgg
     1081 gaatttgccg gggaattcga agtcgggcgt cgccgtcttc gccgtggcgt cgattttgta
     1141 ttcgatcgcg cgggagtgat actggctcgt gtcgcccgtc accgagccgc tccagccgcc
     1201 gttgtcgtaa aacatgacgg tgctgtcgtc gtcgtggaac tccggatcgt gcgagtcgct
     1261 gaactgtgcg tccgccggca cgtacgtgaa gtcgccgagg cccttgctgc cgtacgaggc
     1321 ggggatgagc cactgatacg tcgggttttg gtaggtggtc ttgagcagcc cgacccagcg
     1381 gcaattcgca tacacctcgt tcttttcggt gtcgatggtg atcgagttgc cgtggcacca
     1441 gtcgcccgac gaacctgcgg gcggcggcac gagcgcggcg tagtcgagcg accacacttc
     1501 tttgctgtcg gcatcgagct cgcgaaatac tggattctgt aggctgccct tcgtcacgta
     1561 ttcgaggatc acgtagtggc cgttcgctag cttcgcggcg tggtgcgaaa cgttggcgcc
     1621 cggcagacac gcggcgtgtt tacactccca aatgatgtta ccggcgaagt ctacttcgcg
     1681 cggcggcacg ccgttcgtgt tgttctggtt ccaggtcgga ccgatgacga cgcccgtgtc
     1741 cgtgagctgc gtggaaacgg cgccgccgat gtcgacgccg ggtccgtcga tgaagtacca
     1801 gacgggctgg ccgtcggcgt cgtagatcac cgccgccggt gggtccgccg aacgcggccg
     1861 attgtcggtc ccgccgactt ccacgttcat cagcgtccag ccggcttgcg aacgcgtctt
     1921 gtcgttgatc atcaccttgc cgaccgggat cgcggccggc agctggcccg tcatgaacgt
     1981 gccctcgccg ctttgtgagc cggagctggc cttgatggcg taggtctgtg ccgcgtgcat
     2041 gccgatgacg agcacgcgat gatcggtgac ccgcttgtcg tccgagattt cccactggta
     2101 gccggcgacg ccgaaatcga cgacggagtt tgccggtgcc tcggttttcc agctcacgta
     2161 gcaggaaagc acgctgttcg gattcgcttc gatcgtcagg ctgagcgtgc cgctcgtact
     2221 gctcgcgccg ctgctgcccg gcacgccggc cgcgccgctg cctgctgatc cgctcgcgcc
     2281 cgcaggcgag ggggagccgc ccgcgctcgc gccggtgttt ccacctgagg acgcgccacc
     2341 tgtcccgggg gcgctgctgc ccgccatgcc cgcgcccatc atcacgttgg agctcgtacc
     2401 gctcgtgccg ttgacgccgc cgcggccgcc cgtgtccacg agcccgccgc tgcctcccga
     2461 gccggcgctc gttccgggga cggctcccga gccgtgcgaa cgttccacgc tgccattgcc
     2521 gcagctgacg atcaaggtgg cgagggcccc aacgaaaacc gcggtacttg gagtgctggt
     2581 cactagtcga ataccaatag taagaggtgc accgaaaccg tgcgcgagtg actagtacct
     2641 cgcgtcgagc gagccaggca acccctcgtc cgtcggcgaa agtcgctgaa gcagcgttag
     2701 tcgtttctac ggtgtcaagg cgagcgattt cacgccgtca gcgttcgggt tccgtggcga
     2761 gcgaacgttc gacgctgagg agcccgagcg cggccaagcc ggcgagattc gtgaataaga
     2821 gcggagcgaa cgcaggggcg ccgtagacga ggcgctcggt caagctgctg ccgggtcgca
     2881 agacgagatc ggcatggaca tgcagcgtga agccgataaa cccgatgatt gcttccgcgc
     2941 ccatgaccca cgctgtcgcg cgccgcaacg cgagtcgttc aggacgcgcc acgacgcagg
     3001 cgaggaaact cgtgccgaag gcggcgcccg tgaccgacaa ccactcggaa gcacggaaaa
     3061 agccgttctg cgcgtgatcg agcagcgaca atccgagatt accggcgaac cccgccgcgg
     3121 cgaggaagag cagccaacgt gcccactcga gcgtctctgt tcgctcgagc cgattgagca
     3181 acaggagtag tccgacgccc acgtacgaaa gtggcgccac gaagggcgcc gcgtacacga
     3241 ggccgtgcag cgtttgctgc tcgaagaacc cactctgcaa atgaaagagc gtgccgagca
     3301 caccgatcgc cacggaggcg ccgccgacgc acagcccaac cacgtcgcgc ttcacgccgt
     3361 ggcgtgcgtc cgcgacgagc ggcgcgagta gaagtggcgc ggccaccgag aacccgacgg
     3421 gcagccactc cacgcggcgt tcgaacgcgt tcgcttggtg agcaatccag atatcgaggc
     3481 ctagaaaagc gaggttcaag agcacgaagc tctcgatcca aaaggcaatc ggcaagcccg
     3541 cgagctgcct ccgccaagtt ccttcgctac tggcgctcat agcttcggtt gcgcgcggat
     3601 ctccgccgcg aggtggtcga gctcgacttg atggcgcaag agctcgtagt tgccgtgcca
     3661 ttgcacgaaa tcggcgccgc ccatgaacgc gccgtgcttg gcggtgcggc cgaaataatg
     3721 ccaggtgtcg aattcgagga attcgatcgg ctcgtcgaag ggttctggcg tgagcttacc
     3781 gtccttgcgc aggccggcga cgacggcggt cgccgcttgc accttttggt tcgtggcggc
     3841 gacgacggcc tccgccgccg cgtaaaaggc atcgatgcgg gagtgctcgt ggcacttcgt
     3901 gcacagatcc ttcatttccg cttgtccccg atccgccgcg ggtcgcttcg tggaaacggg
     3961 cgcgaacagg aaccacgaca gccgctcggt cgtgtcgtgc gtcatcttca tgccttcgag
     4021 gccgctcatg tggcacgtgg cgcaggtggg gacgggcatg tccgcggtcg tcaggtgctt
     4081 cggatccgcg gcgaggttca tgtgttcgtg ctgcgcggcg aagagcgcgc cgtgcttcga
     4141 ctcggtatag atctcgagct ggctgtggtc ggggcccatg tggcactggc cgcacgtggt
     4201 cggttcgcgg gcgagcgcga cggacgcgac gtggcgcgcg tggcaattcg tacacgagcc
     4261 gaacgagccg tccgcgttcg gtttgccgac ggcatggcag ctgtcgcagc cgctcgcgag
     4321 cgcggcaggg ccttcgagcg cgccgaccgc attgcccgcg cgcttcagcc agccggggtg
     4381 atagcgctcg cccagcgcta gctgctctgg gctgaaatcg ctcgct
//
LOCUS       DATIML010000785         5852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2473425, whole genome shotgun sequence.
ACCESSION   DATIML010000785 DATIML010000000
VERSION     DATIML010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5852
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2473425"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..1175)
                     /locus_tag="VLJ38_13485"
     CDS             complement(69..1175)
                     /locus_tag="VLJ38_13485"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU40583.1"
                     /translation="MRVLHVHSGHAWGAVEATLATLARRAELAPAMQPEFALCADGRL
                     RRELENAGAAVIDLGSVQAQAPWSIVRARRELRRLLAGANYDVVVCHSAWTQAVFGGV
                     PRTLGIPEVFYLHDRVHHHRCVERWAARHPPDWSIANSEFTRAGLAGLFAVERSSVVY
                     SPVEPAGAVLSAEERRRVRAELGFDDETVVIVQACRLVPSKGHARLLRALARLPPPTS
                     WFCLQIAAVDGAAERAYRTSLEEQARALGVTARLRFLEDADDASRLFAAADIHCQPNL
                     EPEPFGIAFVRALEAGLPVVTFDMGGPREIVTDEVGVLVTDEAKLAAALERLVGDPEL
                     RKRLGAGGPARAHQLCDPAARLPEIAAVLERVTR"
     gene            1275..1877
                     /locus_tag="VLJ38_13490"
     CDS             1275..1877
                     /locus_tag="VLJ38_13490"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSU40584.1"
                     /translation="MSAEPLSSIHHTAIVEPTAVLGPGARVWHFCHVMEGARIGARTV
                     LGQGCFVGRGVRVGAGVRVQNHVSLFEGVELEDDVFVGPSVVFTNVLNPRAERPRKGE
                     FGRTLVRRGATIGANATILPGVVLGEYSFVGAGAVVREDVAPHAIVVGVPARQSGWMS
                     RQGERLEFSEGLGTCPASGERYVLSSAGVRLIDAAALRSV"
     gene            complement(1846..2175)
                     /gene="cyaY"
                     /locus_tag="VLJ38_13495"
     CDS             complement(1846..2175)
                     /gene="cyaY"
                     /locus_tag="VLJ38_13495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HSU40585.1"
                     /translation="MTEDEYEAVARPELSALIRALDELELPELEAELASDILTLEFAD
                     GARYVVNSHRAARQIWMAAELRAWHFDWIAERGRWIAAKSGDELWATLEAALARRLKR
                     SVTLPRR"
     gene            complement(2172..2591)
                     /locus_tag="VLJ38_13500"
     CDS             complement(2172..2591)
                     /locus_tag="VLJ38_13500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40586.1"
                     /translation="MRARVLLLTFGALVALPLACKKDEQPPPQQPVYGQYPQQQPYPA
                     AQPTAMQPAPTAMQPAPGQPTAMPAPTTAPAPTGAASAGALSQPSPMALACQSDAQCL
                     THRCNTQFGKCAWPCQTDNDCNPGNHCMAGACVPKMQ"
     gene            2668..3873
                     /locus_tag="VLJ38_13505"
     CDS             2668..3873
                     /locus_tag="VLJ38_13505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40587.1"
                     /translation="MSERAEPVSVLREAVVTRLALELRSALKRKPAREAWLGGALRSL
                     FLHAPELQRELVGALELFVRRGSFDRPLYAVIARGLGESRDPRVLPLLATALGTEDGG
                     GLATLAAAGHSAQPALAEPLAKLAGNRHAHIAFAAEVARVARGESNGAHARAVAPMIK
                     EVHRIALCQDMLVAWTWRPPLAPGIAAALAALRGAERHLGRWLLLAELGARAGDSTAL
                     EEARQQAAVGPSGTRPAWALVSWALEAAARPPATRPNLELVTRLSDRPTADKDLSFLF
                     RLAEARVQSSCPLLRHLTRGPLEHEASVRAALCLARDFGDDRARLQLAHAVEKGQDEA
                     LRGLASAALFDLGERERAVSAADELAQSAKLPTLTFGNLVLLAASGRESGPLVTEPRV
                     RRIQLGWWP"
     gene            3870..5669
                     /locus_tag="VLJ38_13510"
     CDS             3870..5669
                     /locus_tag="VLJ38_13510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40588.1"
                     /translation="MKRAAAWRRAPALCLALALVPSAHAADRETALVLFADTDDDDND
                     GVPDAEATRVTGATARDIVPLPPRSSVEPLSAPVARWIAGAKPWNGVGKPRGALALQG
                     LRAGATAAVIDGASVELAVVEVVLVDGRGGKIDLARSHAAVSRRLPSAAPSNDAPERP
                     DADAMRWLLAGPAAALPEAVTLTSTKPNGAVLDTIPSVTLEPVTCPPDLPPALTCRAT
                     PLGFAVADVIDRSRAAESARWIQAEVGGRLVLSSDGRKVASVRVGGPRVTAVGPIERL
                     RGHLRVHVFRTARGGMPAIGGDEAGARALARNEVEVASLLWGQCGIHFGPPSGQEIAV
                     HDPPPVYLLAVGCDAGMPASGGELRFSVAGRRVRVATRAGQRPVEVASAVVRALAAAG
                     VSASVSPNPTTLGAPFGTADVIVRRPDGALAELHADGAAPLSSDPSLTACFGEVDFAD
                     GIEHFTDVDAPAGTVEERALVKAFDDGDPTTIDVFVVPAFAGAGRIGESFVHDPGASI
                     QNVVILDRAGIRAGARSFVLAHELGHVLLDLPGHPDDFGVDRPSDLMDADAADPSMFG
                     PRRLSIAECERAFRQSGPAAAIPLLEPWPLTTK"
BASE COUNT          844 a         2061 c         2049 g          898 t
ORIGIN      
        1 gctgccctga tttccgaggc cctggctcga gcactcgccg ccgagcggcc gaacgacggc
       61 acctcgcgtt agcgcgtcac ccgctcgagc accgcggcga tctcgggcag acgcgccgcc
      121 ggatcgcaga gctgatgcgc acgagcagga ccacccgcac cgagccgttt gcggagctcg
      181 gggtcgccaa cgagcctctc gagcgcggca gcgagcttcg cttcgtcagt aacgagcacg
      241 ccgacttcat ccgtcacgat ctcgcgcggc ccgcccatgt cgaacgtgac gaccggcaga
      301 cccgcttcga gcgcacgcac gaatgcgata ccgaacggct cgggttcgag gttcggctgg
      361 caatggatat cggcggcggc gaacagacgc gacgcatcgt ccgcgtcttc gaggaagcgc
      421 agacgcgccg tgacgccgag cgcacgcgcc tgctcctcga gcgaagtgcg gtaggcgcgc
      481 tcggcggccc cgtcgacggc cgcgatttgg aggcaaaacc acgaggtggg aggcggcagc
      541 cgcgcgagcg cacgcagcag gcgcgcgtgc cctttcgagg gaacgagccg gcacgcctga
      601 acgatgacga ccgtctcgtc gtcgaagccg agctcggcgc gaacccggcg ccgctcttcc
      661 gcactcagca cggccccggc gggctcgacc ggcgagtaaa cgacggacga acgctccacg
      721 gcaaagagcc cggcgaggcc tgcgcgagta aattcgctgt tcgcgatcga ccaatcgggc
      781 ggatgccgcg cagcccagcg ctcgacgcag cgatggtggt ggacgcggtc gtgcaaatag
      841 aagacctcgg ggatgccgag cgtgcgcggg acgccgccga aaacggcctg cgtccacgcc
      901 gagtggcaga cgacgacgtc gtagttggct ccggcgagca gccgccgcag ctcccgccgc
      961 gcacgcacga tcgaccacgg cgcttgcgcc tggacactgc cgaggtcgat caccgccgcg
     1021 cccgcgttct cgagctcgcg ccggagccgg ccatccgcgc agagcgcgaa ttccggctgc
     1081 atcgccggag cgagctccgc gcgacgtgcg agcgtcgcga gcgtcgcctc gacggcgccc
     1141 cacgcgtggc cggaatggac gtgaaggacg cgcacgggtc gtcccgaata gcacagctcg
     1201 accgctgcct ccccgcgact tgcgcaatcg aagcgctcga tcccccgccc cgttcacgct
     1261 aacgaggtcc tgccgtgagc gccgaacccc tgagctcgat ccaccacacc gccatcgtcg
     1321 agccaaccgc ggtactcggt ccgggagccc gcgtttggca cttctgccac gtgatggagg
     1381 gcgcgcgcat cggtgcacgt acggtgctcg gccagggctg cttcgtgggg cgcggggtac
     1441 gcgtcggcgc cggggtacgc gtgcaaaacc acgtgagcct gttcgaaggc gtggagctcg
     1501 aggacgacgt gttcgtcggg ccgagcgtcg tgttcacgaa cgtcttgaac ccgcgcgccg
     1561 agcgcccgag aaagggcgaa ttcgggcgca cgctcgtgcg gcgcggcgcg actatcggcg
     1621 cgaacgcgac cattttgccg ggcgtcgtgc tcggcgaata ctcgttcgtc ggcgcgggcg
     1681 ccgtggtgcg cgaggacgtg gcgccgcacg ccatcgtcgt cggcgttccg gcgcgccaga
     1741 gcggctggat gagccgtcaa ggcgaacggc tcgagttcag cgagggactc ggtacgtgcc
     1801 cggcgtccgg cgagcgttac gtgctttcga gcgcgggcgt tcggctcatc gacgcggcag
     1861 cgttacggag cgtttgaggc gtcgcgcgag cgctgcttcg agcgtcgccc acaattcgtc
     1921 gcccgatttg gcggcaatcc agcgcccgcg ctctgcgatc cagtcgaaat gccaagcccg
     1981 tagctcggcc gccatccaga tctggcgggc ggcacggtgc gagttcacga cgtaacgcgc
     2041 gccgtcagcg aattcgagcg tgagaatgtc gctcgcgagc tccgcttcga gctccggcag
     2101 ctcgagctcg tcgagcgcac ggatgagcgc gctgagctcg ggacgagcaa ccgcttcgta
     2161 ctcgtcctcg gtcactgcat cttgggcacg caggcgcccg ccatgcagtg gttacctgga
     2221 ttgcagtcgt tgtccgtctg gcacggccac gcgcattttc cgaactgcgt gttgcagcgg
     2281 tgagtgaggc actgagcgtc cgactgacac gcgagcgcca tgggggacgg ctgcgagagc
     2341 gcgcccgccg acgcagcgcc cgtcggagcg ggagcggtcg tgggggcagg catggctgtc
     2401 ggctgcccgg gcgcgggctg catggccgtg ggcgcgggct gcatggcagt aggctgggcc
     2461 gcagggtaag gctgctgctg cgggtactgc ccgtagaccg gctgctgagg cggcggctgt
     2521 tcgtcttttt tacaagccag agggagcgcg acgagggcgc cgaacgtcag gagcaaaacg
     2581 cgagcccgca tgatttatcc tcgcgcgcga agttagccgg cctatcgttt tcggtcaacg
     2641 acggtttggg gttatcgtcg tggcacaatg tccgagaggg cggagccagt ctccgtactt
     2701 cgcgaggccg tggtcacgcg cctcgcgctc gagctgcgat ccgcgctcaa gcgcaaacca
     2761 gcgcgtgagg catggctcgg gggcgcgctg cgttcacttt ttcttcacgc gcccgagctc
     2821 cagcgcgagc tcgtcggcgc gctcgagctc ttcgttcgtc gcggctcgtt cgaccggccg
     2881 ctctacgcgg tcatcgcgcg cggactcgga gaaagccgtg acccgcgtgt gcttcccctc
     2941 ctcgcgactg cgctcggcac cgaggacggc ggcgggctcg cgacactcgc cgcggccggg
     3001 catagcgctc aacctgccct cgccgaaccg ctcgccaagc tcgcgggcaa tcgtcacgcg
     3061 cacattgcgt tcgccgcgga ggtggcgcgc gtcgcgcgcg gtgaatcgaa cggcgcgcac
     3121 gctcgcgccg tcgctcccat gatcaaagag gtgcatcgca tcgcgctttg ccaggacatg
     3181 ctcgtcgctt ggacgtggcg ccccccgctc gcgccgggca tcgccgccgc gctcgccgcc
     3241 ttgcgcgggg cggaacggca cctcggccgc tggctcctac tcgccgagct cggcgcgcgc
     3301 gcgggtgact cgaccgcgct cgaagaggcc cgccagcaag ctgcggtcgg accctccggc
     3361 acccgtccag cgtgggcgct cgtgagttgg gcgctcgagg ccgcagcgcg cccaccggcg
     3421 acgcgcccga acctcgagct cgtcacgcgg ctgagcgatc ggccgactgc cgacaaggac
     3481 ctgtcctttc tttttcggct cgccgaggct cgggtccaaa gctcatgccc gctcctgcgc
     3541 cacctcacgc gcggcccgct cgaacacgaa gcctccgtgc gcgccgcact ttgcctcgct
     3601 cgtgatttcg gagacgaccg ggcacgtttg cagctcgcgc acgccgtcga gaagggccag
     3661 gatgaagcat tgcgcggcct cgcgagcgcc gcactcttcg atctcggcga gcgcgagcgc
     3721 gcggtgtcgg ccgccgacga gctcgcccaa agcgcgaaat tgccgacgct cacgttcggt
     3781 aacctggtct tgctcgccgc atcgggtaga gaatcgggac cactcgtgac ggagccgcgc
     3841 gttcgccgca ttcagctcgg ttggtggccg tgaagcgcgc ggcagcttgg cggcgagcgc
     3901 cggcgctgtg tttggcgctc gcgctcgtgc cgtcggcgca cgcggccgat cgcgagacgg
     3961 ccctcgtgct gtttgcggac accgacgacg acgacaatga cggtgtccca gacgcggagg
     4021 cgacgcgcgt cacgggcgcg acggcgaggg acatcgtgcc gctgccgccg cgcagcagcg
     4081 tcgagccgtt gtccgcaccc gtggcacgct ggatcgccgg tgcgaagccg tggaacggtg
     4141 tcggcaagcc gcgtggcgca ctcgcgctgc aggggctgcg agcgggcgca accgccgccg
     4201 tcatcgacgg tgcgtctgtc gagctcgccg tcgtcgaggt ggtgctggtc gacggccggg
     4261 gcggcaagat cgacctcgcc cgctcccacg cggcagtttc gcgccgacta ccttcggccg
     4321 cacccagcaa cgacgccccc gagcggcccg acgccgacgc catgcgttgg ttactcgccg
     4381 ggcctgccgc cgcgttgccc gaagccgtaa cactcacgtc gacgaagccg aacggcgccg
     4441 tgctcgacac gattccgagc gtcactctcg agcccgtcac ttgtccgccc gatttgccgc
     4501 ccgcgctcac ttgccgcgcg acgccgctcg gcttcgccgt cgcggacgtg atcgatcgga
     4561 gccgcgccgc cgaatccgcg cgctggatcc aggcggaggt cggggggcgc ctcgtcttga
     4621 gcagcgatgg acgcaaagtc gcgagcgtgc gcgtcggcgg accgcgcgtc accgccgtcg
     4681 gacccatcga gcgcctgcgc ggacatctgc gcgtccacgt gtttcgcacg gcacgcggcg
     4741 gcatgcccgc gatcggcggc gacgaggcgg gcgcgcgcgc cctcgcgcgg aacgaggtcg
     4801 aggtggcgag cctgctctgg ggccagtgcg gcatccattt cgggccaccc tccgggcaag
     4861 agatcgcggt ccacgacccg ccgcccgtct acttgctcgc cgtcggctgc gacgccggca
     4921 tgcccgccag cggcggcgag ctccggtttt ccgtggccgg acggcgcgtg cgcgtcgcga
     4981 cgcgtgcagg ccagcgaccc gtcgaagtgg cgtcggcagt cgtgcgcgcg ctcgctgcgg
     5041 cgggcgtgag cgcgagcgtg agtccgaatc ccacgacgct cggcgcgccg ttcgggacgg
     5101 cggacgtcat cgtacggcgc cccgacggcg cgctcgccga gctccacgcc gacggcgcgg
     5161 cgccgctctc gagcgatccg agtttgacgg cgtgcttcgg cgaagtggac ttcgccgacg
     5221 gcatcgagca cttcacggac gtcgacgcgc cggcgggcac cgtcgaggag cgcgccctcg
     5281 tcaaggcgtt cgacgacggc gatccgacga cgatcgacgt cttcgtcgtc ccggcgttcg
     5341 caggcgccgg acgcatcggc gaatcgttcg tgcatgatcc cggcgcgagc attcaaaatg
     5401 tcgtcatcct cgaccgcgcg ggcattcgtg cgggcgctcg ttccttcgtg ctcgcgcacg
     5461 agctcgggca cgtcttgctt gacctacctg gtcatcctga cgatttcggc gtcgatcggc
     5521 cgtctgatct catggatgcc gacgcggcag atccgagcat gttcggtccg cgccgactct
     5581 cgatcgcgga atgcgagcgc gctttccgtc agagtggacc ggcggcggcc atcccgcttt
     5641 tggagccctg gccgctcacg acgaagtagc cccgggcccc catcgtccgg tggacaacgg
     5701 tcgcgcccaa ggctacgaaa ggtttcgtgc ctgacgaaag cttcttactg aagcgcgcgc
     5761 gcacgagggt ggtacgcggc ctattccccg ccttcatcct ctgtgctgtc agcgcgactt
     5821 ccgtttcttg tggtagcgac gacttttgct cg
//
LOCUS       DATIML010000786         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_164173, whole genome shotgun sequence.
ACCESSION   DATIML010000786 DATIML010000000
VERSION     DATIML010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164173"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..602)
                     /locus_tag="VLJ38_13515"
     CDS             complement(111..602)
                     /locus_tag="VLJ38_13515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSU40589.1"
                     /translation="MAASKQRPDPRKSLVGFIVGDVAYAVPIAEVQEIVAPLPLTELP
                     HSPETVAGVADHRGQVIPIIDLRARFRLPRLPDRRRAKWILVRVEDRTFGLAVDRVTD
                     VFGTGGVEVRPAPTLGGGEDTRGIVGVTSYEGALVFVLDVSRLYALVSAFTEADLVAM
                     GAR"
     gene            complement(608..1090)
                     /locus_tag="VLJ38_13520"
     CDS             complement(608..1090)
                     /locus_tag="VLJ38_13520"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSU40590.1"
                     /translation="MVDLVRTRGERLARRASGRGPVREFLTFVLGSDVFGVELARVKE
                     ILSPPPITPVPRAPIEVVGVCSVRGLLVTVVDLRIRLKLEVRPDTRRTRILLATASSG
                     EAVGLWVDEVLQVVRLAETDMELATAGIGTEVSEYVLGVGRPQGEFIVLLDLSALVTG
                     "
     gene            complement(1083..>2345)
                     /locus_tag="VLJ38_13525"
     CDS             complement(1083..>2345)
                     /locus_tag="VLJ38_13525"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HSU40591.1"
                     /translation="DRGGLEQAASLRSLTQTVRVDIRKLDHLMNIVGELAIVRSAFGR
                     VAEKLRGEGQRKLAAELQRLHRNFDRRLGEMQDGILEVRMVPLGQVFDRLARVVRQIS
                     REVGKEIRLVITGAETEIDKLIVEELSDPLMHMIRNAIDHGIEAGQGRVEVGKPLAGT
                     IALNAFQKGNHVMIEVEDDGRGIDEQALLEKAVRLGKIAAEDGAELSREEVLALVFLP
                     GVSTREVVSDTSGRGVGMDIVKTNIGRLGGIIDVQSEPGIGTKMTITLPITLAIVSAL
                     MVHIADQVFAIPLSTVSEALSLEPGLSRMLDGREVITLRGATLPLCRLDRVLGLERKK
                     TAAPRKHYVVVVSLGNRRLGVVVDHLIGQQDIVIKPLGRSLASVRGFAGATELGDQRV
                     GLVLDAAAIVDEVLSGVDVLRERGALHG"
BASE COUNT          379 a          846 c          764 g          356 t
ORIGIN      
        1 caaacccgcc gccgcgagcg ccggctcgag tcccacgagc gcgcgcgcgg cgcggcggcg
       61 ctcctcggga tcgtcggacg tgagtgcggc aaccgggatg ctcgtgccgg tcatcgcgcc
      121 cccatggcca cgagatcggc ctccgtgaac gcgctcacga gcgcgtagag gcggctcacg
      181 tcgagcacga agacgagcgc gccctcgtag ctcgtcaccc ccacgatccc gcgcgtgtcc
      241 tcgcccccgc cgagcgtcgg cgcgggccgc acctcgacgc cgcccgtgcc gaacacgtcc
      301 gtcacgcgat cgacggcgag cccgaacgtg cgatcctcga cgcgcaccaa aatccatttc
      361 gcgcggcggc gatcgggcag ccgcggcagc cgaaatcgcg cgcgcagatc gatgatcggg
      421 atcacttgtc cgcggtggtc cgcgacaccc gccacggtct cgggcgagtg cggcagctcc
      481 gtgagcggca gcggcgccac gatttcctgg acctcggcga tgggcaccgc ataagcgacg
      541 tcgcccacga tgaagccgac gaggctcttt cgcggatcgg gccgctgctt gctcgctgcc
      601 atcgctttca tccggtcacg agcgccgata aatccaaaag cacgatgaat tcgccctgcg
      661 gccgacccac accgagcacg tattcgctca cctcggtgcc gatgcccgcc gtcgcaagct
      721 ccatgtccgt ctcggccagg cgcacgacct gcagcacttc gtcgacccag aggcccacgg
      781 cctcgcccga gctcgccgtc gcgagcagga tgcgcgtccg gcgcgtgtcg ggccgcacct
      841 cgagtttgag ccgaatcctg aggtcgacga ccgtgacgag caggccgcgc acgctgcaca
      901 cgccgaccac ttcgatcggc gcgcgcggga cgggcgtgat cggcggcggc gacaggatct
      961 ccttcacgcg cgcgagctcg acgccgaaca cgtcactgcc gagcacgaac gtcaaaaatt
     1021 cgcgcacggg gccgcgaccc gacgcacgcc gcgcgagccg ctcaccgcgc gtgcgaacga
     1081 gatcaaccat gcaacgctcc ccgctcgcgg agcacgtcca cgccggacaa cacctcgtcg
     1141 acgatggcgg ccgcgtcgag cacgagcccg acgcgctgat cgccgagctc ggtcgcgccc
     1201 gcgaagccgc gcaccgaagc cagcgagcgg ccgaggggtt taatcacgat gtcctgctgg
     1261 ccgatcaggt gatcgaccac gacgccgagc cggcggttgc cgagcgaaac cacgacgacg
     1321 tagtgcttgc gaggcgcggc cgtcttcttg cgttcgaggc cgagcacgcg atcgagccgg
     1381 cagagcggga gcgtggcgcc gcgcagcgtg atgacctcgc gtccgtcgag catgcgcgag
     1441 agccccggct cgagcgagag cgcctccgac accgtcgaga gcgggatcgc gaacacctgg
     1501 tcggcgatgt gcaccatgag cgcgctcacg atcgcgagcg tgatgggcaa cgtaatcgtc
     1561 atcttcgtgc cgatgcccgg ctcgctctgc acgtcgatga tgccgccgag gcggccgatg
     1621 ttggtcttga cgatgtccat gccgacaccg cgaccgctcg tgtcgctcac gacctcacgc
     1681 gtcgagacgc cgggcagaaa cacgagcgcg agcacttcct cgcggctgag ctcggcgccg
     1741 tcctcggcgg cgattttgcc gaggcggacg gccttctcga gcagggcttg ctcgtcgatg
     1801 ccgcggccgt cgtcctcgac ctcgatcatc acgtggttgc ccttttgaaa ggcgttcagc
     1861 gcgatggtac ctgccagggg tttgccgact tccactcggc cctgccccgc ctcgatcccg
     1921 tgatcgatgg cgttgcggat catgtgcatc agcgggtcgc tcagctcttc gacgatcagc
     1981 ttgtcgatct cggtctccgc gccggtgatg accaggcgga tctctttgcc cacctcacgg
     2041 ctgatttgac ggaccacgcg agccagacgg tcgaacacct ggcccaaggg gaccatccgc
     2101 acctcgagga tgccgtcttg catctcgccc aggcggcggt cgaaattgcg atgtaagcgc
     2161 tgcagctcgg cggccagttt tcgctggcct tcgccgcgca acttctctgc gacgcggccg
     2221 aaggcgctgc gcacgattgc caactcgccg acgatgttca tcaggtggtc gagcttgcga
     2281 atgtcgacgc gcacggtttg cgtgagcgag cgcagcgacg cggcttgctc cagcccgccg
     2341 cgatc
//
LOCUS       DATIML010000787         3974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1323964, whole genome shotgun sequence.
ACCESSION   DATIML010000787 DATIML010000000
VERSION     DATIML010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3974
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1323964"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..2478)
                     /locus_tag="VLJ38_13530"
     CDS             complement(43..2478)
                     /locus_tag="VLJ38_13530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40592.1"
                     /translation="MSKPFAPRVELARCAPLATSFRTLARLTPLVALMAAPGCLDRPI
                     SPAQPTTTNLYVHTLPNHVVDKADLLFMIDNSISMADKQQILAKAVPVLVERLATPRC
                     LDAGGKPTGQVSDTSGHCASGRPEFTAVKDIHVGVITSSLGSHGGTECEPAGDDAANH
                     RTPDDRAELLPTANPGVRGAIDSWNQQGFLAWDPTQTKNTPPGDADLRHFSAAFGDQV
                     QKAGENGCGFEGSLEAWYRFLVDPAPPSSVGKATDAQGIPHTVLGPVNQTLLAERKAF
                     LRPDSLLVVVMLTDENDCSIDDEDGAQGWLVTTTVGGGGGEWHLPRATAVCATAPNDR
                     CCHSCGLPAPEGCTPNDSDTECKKHTALDRDEDQKNLRCFEQKRRFGLDLLYPLERYI
                     DGLTELTVRDHVNQEVPNPIFAAPPGEPARSKDLVLLTGIVGVPWQDIATADSLTGDG
                     LTYLTAAELSKQGRWPLILGAADGSPATDPLMQESIAARSGQNPILKAPLVPPGTTDA
                     KNPINGHEQNVVGSDDLQYACIFPLPTPRQCTDDNADSCDCAAEYAPYERPLCDYPSD
                     PSAHGIQRFAKAYPGLRELGVLQGVKDNGIVASICAKHTQPAPGLTESADASYGYNPA
                     VAAMGNVIIGRLARQCLPRPLSVETDPSSPSHGQVPCAVVEVKPNRDAACSCDTTRGR
                     SALGSSDAKLSAAVRDELWSEGDCGAQGERNCHDYCFCKIAPLAGASLDACQSGNEDA
                     SAFGYCYVDPAQGIGNPALVAGCPAAGQRSLRFVGDGLPANGSITFVACLGSTFDENA
                     PTAVTQARPAAAP"
     gene            complement(2687..3754)
                     /locus_tag="VLJ38_13535"
     CDS             complement(2687..3754)
                     /locus_tag="VLJ38_13535"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HSU40593.1"
                     /translation="MRNKAQSARVVIGLVAGLLATTLVAAPASAADAPPKAATGKADA
                     APAAKPPTKKQKDAARKAYAEGEKAYNSGDYATAVVAFQKANDAIKSPQADYWIAKSL
                     DQQNKTTDAIAAYESFLAAPDSSKVGEQKLNDAKARLDALKATLPAEVMVETDPALAS
                     VSVDGAPQPGEPPMTLKLTPGKHRLSVSSNGYQTKDLDIEVKGGEQQKQTIALLKDLP
                     PVAAAAVVAAPPPPAPAPPPPPPEEHSMVPAYVTLGIAGAAAVVGTVFGVKALSSKSD
                     FDKNPTTKTADDTERSALIADMAFGVAITLGVTGIVLLTSDDSPPPKAASHLTLPKRA
                     RLDILPYAGPKGGGASAKLTF"
BASE COUNT          544 a         1252 c         1459 g          719 t
ORIGIN      
        1 ctgctgcgcc tggccgcacg gcggttcttt cggggcgcga gctcacggcg ccgctgccgg
       61 gcgggcctga gtgacggcgg tcggcgcgtt ttcgtcgaag gtcgagccga ggcacgcgac
      121 gaaggtgatc gagccgttgg cgggcaagcc gtcgccgacg aagcgcaggc tacgctgacc
      181 ggcggccggg cagcccgcga cgagcgcagg gttgccgatg ccctgcgccg ggtcgacgta
      241 gcagtacccg aacgcggagg cgtcttcgtt gccgctctgg cacgcgtcga ggctcgcccc
      301 ggcgagcggc gcgatcttgc agaagcagta gtcgtggcaa ttgcgttcgc cctgcgcgcc
      361 acagtctccc tccgaccaga gctcgtcgcg tacggccgcg gaaagttttg cgtcgctcga
      421 gcctagcgcg ctgcggccgc gcgttgtgtc gcaagagcag gcggcgtcgc ggttgggctt
      481 cacctcgacg accgcgcacg gcacttggcc gtgcgacggt gagctcggat ccgtttcgac
      541 cgagagcggg cgaggcaaac actgccgcgc gagccggccg atgatgacgt tacccatggc
      601 ggcgacggcg gggttatagc cgtaggacgc gtcggcggac tccgtcagac cgggcgcggg
      661 ctgggtgtgt ttggcgcaga tgctcgcgac gatgccgttg tctttgacgc cctggagcac
      721 gccgagctcg cgtaagccgg gatatgcctt ggcgaaacgt tgtatgccgt gcgcgctcgg
      781 atcgctcggg tagtcgcaga gcgggcgctc gtagggcgcg tattcggcgg cgcagtcgca
      841 ggagtccgcg ttgtcgtccg tgcactggcg cggcgtgggc agcgggaaga tgcacgcgta
      901 ctgcagatcg tcgctcccga ccacgttctg ctcgtgcccg ttgatcgggt tcttggcgtc
      961 ggtcgtgccg ggtggaacga gcggcgcctt gaggatggga ttttggccgc tgcgcgctgc
     1021 gatcgactcc tgcatgagcg gatcggtcgc tgggctgccg tccgcggcgc cgaggatcag
     1081 cggccagcga ccctgcttgc tgagctcggc cgccgtgagg taggtgagtc cgtcgcccgt
     1141 caggctgtcg gcggtggcga tgtcttgcca gggcacgccg acgataccgg tgaggagaac
     1201 gaggtctttg ctacgtgccg gctcgcccgg gggcgcggcg aagatggggt tcggtacttc
     1261 ctggttcacg tgatcgcgga ccgtgagctc cgtgagcccg tcgatgtagc gctcgagcgg
     1321 gtacaagagg tcgaggccga agcgacgttt ttgctcgaag cagcgcaagt tcttttgatc
     1381 ctcgtcgcga tcgagcgctg tgtgcttctt gcattccgtg tcgctgtcat tgggcgtgca
     1441 accctcgggc gcgggcagtc cgcaggaatg gcagcagcgg tcgttcggcg ccgtcgcgca
     1501 gacggctgtc gcgcgcggca ggtgccactc gccgccgccg ccgccgaccg tcgtcgtgac
     1561 gagccaaccc tgtgcgccgt cctcgtcgtc gatcgaacag tcattttcgt cggtgagcat
     1621 cacgaccacg agcagggagt ccggccgcag gaacgccttg cgttccgcga gcaacgtctg
     1681 gttcacgggc ccgagtacgg tgtgcgggat gccctgcgcg tcggtggctt tgccgacgct
     1741 cgagggcggc gccgggtcga cgaggaagcg ataccaagct tcgagcgaac cctcgaagcc
     1801 gcagccgttc tcgcccgcct tctgcacttg atcgccgaag gcggcgctga agtgccggag
     1861 gtcggcatca ccgggcggcg tatttttggt ttgggtcgga tcccaggcga gaaaaccctg
     1921 ctggttccac gagtcgatcg cgccgcgcac tccgggattc gcggtcggca agagctcggc
     1981 tcggtcgtcg ggggtgcgat gattcgcggc gtcgtcgccc gcgggttcac attcggtgcc
     2041 gccgtggctg cctagactcg acgtgatcac gccgacgtgg atgtccttga cggccgtgaa
     2101 ctccgggcgg ccgctcgcgc agtgtccgct cgtgtccgag acttggcccg ttggcttgcc
     2161 acccgcgtcg aggcagcgcg gagtcgcgag ccgttcgacc agcacgggca cggctttcgc
     2221 gaggatttgc tgcttgtccg ccatcgagat cgagttgtcg atcatgaaga gcagatcggc
     2281 cttgtctacg acgtggttcg ggagcgtgtg cacgtagaga ttcgtcgtcg tcggctgcgc
     2341 gggcgaaatc gggcgatcga ggcagccggg cgccgccatg agcgcgacga gcggcgtgag
     2401 ccgggcgagc gttcggaacg aggtagcgag aggtgcgcaa cgagcgagct ccacgcgtgg
     2461 agcgaacggc ttcgacatgc ctgctcgttt cgcaagctgc gtgccgctcg tgttcgcgcg
     2521 gcgattcggc tcgatcgtcg aacgcgccgc gccaacccag ttgaaatgac gacgcttacg
     2581 ccaacgcagg tgtcggacgt ggacgtcgcc cgccgcacaa aaaacaacgg cccgccgcgg
     2641 agggcgagcc gtcgtggcat gacgcgcgcc gcgcgcgcgg tgcgtgtcag aacgtgagct
     2701 tcgccgaggc gccgccgccc ttcggtcccg cgtacggcag gatgtcgagg cgtgcgcgtt
     2761 tgggcaaagt gaggtgcgaa gcggccttcg gcggtggtga gtcgtcgctc gtgagcagaa
     2821 cgatgccggt cacgccgagc gtgatggcga caccgaaggc catgtccgcg atgagcgcgc
     2881 tgcgctcggt gtcgtctgcg gtcttcgtcg tcgggttctt gtcgaaatcg ctcttggagc
     2941 tcagcgcttt gacgccgaat accgtaccca cgaccgcggc tgcgccggcg atgccgagcg
     3001 tgacgtacgc cggcaccata ctgtgctcct cgggcggcgg cggaggagga gcgggcgccg
     3061 gcgggggggg cgcggccacc acggcagcgg ccgcgacggg aggcaggtcc ttcagcagcg
     3121 cgatggtctg cttctgctgc tcgccgccct tgacctcgat gtcgaggtcc ttggtctgat
     3181 agccgttcga cgagaccgag aggcggtgct tgccgggcgt gagcttgagc gtcatcgggg
     3241 gttcgccggg ttggggcgcg ccgtcgacgg agacgctcgc gagcgccggg tcggtctcga
     3301 ccatcacctc ggccggcagc gtcgccttga gcgcgtcgag gcgcgccttg gcgtcattca
     3361 gcttttgttc gcccaccttg ctcgagtcgg gagcggccaa gaacgactcg taggcggcga
     3421 tggcgtcggt cgttttgttt tgttgatcga ggctcttggc gatccagtag tcggcctgcg
     3481 gcgacttgat ggcatcgttc gccttttgga acgccacgac cgccgtggcg tagtccccgc
     3541 tgttataggc cttctcaccc tcggcgtagg ccttgcgcgc ggcatccttc tgcttcttgg
     3601 tcggaggctt ggcggcaggt gcggcgtccg ccttgccggt cgccgctttg ggtggcgcgt
     3661 ccgcggcaga ggccggggct gcgacgagcg tggtcgcaag gagcccggcg acgagtccga
     3721 tgacgacgcg cgctgattga gccttgttcc gcatgggtgt cctccgccgt ccgaatgccg
     3781 gacggtgccc cacaggctag accgcccgag accaggcgga caagccctgg tttcgcctat
     3841 agtgtcttgg ggtttcccgg ctcggcccct ccgttagaga tgccaccatc gacgccttcg
     3901 gatcgcgcgc aacacagcgt ctcggtgacg ccgcgccgca cgttgccgcc tcccgagtgg
     3961 cagccgagcg aagc
//
LOCUS       DATIML010000788         4268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2185229, whole genome shotgun sequence.
ACCESSION   DATIML010000788 DATIML010000000
VERSION     DATIML010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4268
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2185229"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VLJ38_13540"
     CDS             <1..270
                     /locus_tag="VLJ38_13540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40594.1"
                     /translation="SAARSTASAPQKEPLLYAFVIVEGDVYGAPISPDVNARAVREHI
                     DVAKLQEGVPTKAELEITGRSFGLAAELAPDLGAKVAIAVLRSET"
     gene            complement(284..520)
                     /locus_tag="VLJ38_13545"
     CDS             complement(284..520)
                     /locus_tag="VLJ38_13545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40595.1"
                     /translation="MKSEAQASGDTSNDVDRRPPEERRARLLIAIGAAVLFAGIAPAV
                     TDDETGRWLIVGGVGVLFLGLHRFGRLGPEDATA"
     gene            complement(517..1005)
                     /locus_tag="VLJ38_13550"
     CDS             complement(517..1005)
                     /locus_tag="VLJ38_13550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40596.1"
                     /translation="MVIRLFGVTTLLLACTEPAPRAPNPTRPLDERRAIEIIVQAFHD
                     EGDEPVPGRPIVLGPGQALAIDVLARGKKYGVAYVSADERSALGAALPPRDPAMGDAL
                     QLVSGLGDDAEARVLVLNDSEYLYDDQVGEAHADASVTAELKLRRDVRDFLVRAQAEK
                     WP"
     gene            1114..1746
                     /locus_tag="VLJ38_13555"
     CDS             1114..1746
                     /locus_tag="VLJ38_13555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40597.1"
                     /translation="MLRVVVRALRVVAFSSLALACGRSSLPDPKIAARAYADAAAHGQ
                     ADRIYALLETDARRSYGIDRVRELVRDERAELARQGASLRAPGTRVEALATMLLADGS
                     RIELTLEPDGFRVAAADTLPAAAQTPVEALDGLRRALARRSYTSLLRVLSAEARVALE
                     TDLRTLAAALENPATLDVRVQGDRAEVSVGGGHQVTLRRESGTWRVEDIQ"
     gene            1743..2510
                     /locus_tag="VLJ38_13560"
     CDS             1743..2510
                     /locus_tag="VLJ38_13560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HSU40598.1"
                     /translation="MSAGTRLGRRAFAAALGALTFGPERAFAFGEAGAFRARLLAAGK
                     GRPDDARVAGTARWGSELVRRTSAPAHEEPQTVAADRPALFREPFAVWCGTEDVGALS
                     LSEVSGLERFLRLGGTLVVDDTEPGSGAFGRSVRRELLRALPESPPVQLEATHVLFKT
                     FYLLDRPYGRVLGPPRVEAIVRGRNAVVLFLAHDLLGALARRGDAWAYGAEPGGAEQR
                     EHAIRFAVNIAMYVLCSDYKDDVVHAPFLLQRRGRAR"
     gene            2522..>4268
                     /locus_tag="VLJ38_13565"
     CDS             2522..>4268
                     /locus_tag="VLJ38_13565"
                     /inference="COORDINATES: protein motif:HMM:NF018757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HSU40599.1"
                     /translation="MPNLALAEGMTPVAVTLGALVLAAWVLWAALEVRRSERAGAAVL
                     VSALVAALCVAGAFFRPTRVNERGARLGPRVAVLVDQARRLRLPAEHGDRRSVALAAA
                     AALGRRWAQAQVDVYGFGEQKLVPLSLARESTLGQLGEESDLTGALAELAAAPGERVR
                     AVVVVSDGRLARPAERVDEAGLALALGTLGVPVHTVRVTEQAPADASVRQVSTVGAAV
                     AHQPLVLHVTVGCAGGLNCDEVPVVVRELRQGSSPAELARGTAHASTGEATIDLEVTI
                     ERAGQRVIEVAIEPQAGDRVPENDHRLLTLDVRRERVRLLHVAGRPTYDVRQLRLWLK
                     ANESIDLVAFFILRTNGDQPNVVDDTSELSLIPFPVDALFTQHLPTFDAVMLQDIDAV
                     EYKLEPYLPALEAYVRSGGGLIMVGGPSAFAGGGYAGSPLERVLPVELPRSGEPYDLR
                     GFVPRYTAAGRVAPVLGGVRQLLGEDLPLMEGSNTLGKPRPGSIVLWEHPDRRVGDSA
                     MPVLALGEMGDGRSIALGVDATHELGFGELAERTSGRAYGALWDGLLGWLMRDPRYEA
                     GRVSLDGPCIAGEPAS"
BASE COUNT          583 a         1465 c         1552 g          668 t
ORIGIN      
        1 agcgccgccc gcagcacggc gagcgcgccg caaaaagagc cgctacttta cgccttcgtc
       61 atcgtcgagg gcgacgttta cggcgcgccc atctcaccgg acgtgaatgc gcgcgccgtg
      121 cgcgaacaca tcgacgtggc caagctccaa gagggagtac cgacgaaggc tgagctcgag
      181 atcacgggcc ggagcttcgg gctcgcggcg gaactggcgc cggatctcgg cgccaaggtc
      241 gcgattgccg tcttgcgcag cgagacctga gtccagcgag aaactacgcc gtggcgtctt
      301 ccggcccgag ccgaccgaag cggtgcaatc cgagaaagag gacgccgaca ccgcccacga
      361 tgagccagcg tcccgtctcg tcgtcggtaa cggcgggagc gatgccggca aacagcacgg
      421 ctgctccgat cgcgatcaag agccgggcgc gccgctcttc gggcgggcgg cgatcgacgt
      481 cgttgctcgt gtcgccgctt gcttgcgctt cgctcttcat ggccattttt ccgcctgggc
      541 gcggaccaga aaatcccgca cgtcgcgccg gagcttgagc tcggccgtga cgctcgcgtc
      601 tgcgtgtgcc tcgccgacct gatcgtcgta aaggtactcg ctgtcgttta gcacgagcac
      661 acgcgcctcg gcgtcgtcgc cgagtccgct cacgagctgc agcgcgtcac ccatggcggg
      721 gtcgcgcggc gggagtgcgg cgccgagcgc cgagcgttcg tcggccgaca cgtaggcgac
      781 gccgtatttc ttgccgcgag cgagcacgtc gatcgcgagc gcctggccgg ggccgaggac
      841 gatgggccgg ccagggacgg gctcgtctcc ttcgtcgtga aatgcttgca cgatgatttc
      901 gatcgctcgg cgctcgtcga ggggccgggt cgggttcggt gcgcgcggag ccggctcggt
      961 gcaggcgagc agcaaagtcg tcacgccgaa gaggcggatg accattcgcc gggggtttcg
     1021 tggagggacc agggtcgtcc tcgcccgtgc aggggctggc atcgggcgca aaaggtagcc
     1081 aagagggcgt cctttagcta gctctgcgcg agtatgctgc gcgtcgtcgt gcgagccctc
     1141 cgcgtcgtag ctttttcgag cttggcgctt gcctgcggcc gctcgtccct gcctgaccca
     1201 aagattgcgg cgcgcgccta cgccgatgca gcggcgcacg ggcaagccga tcgcatttat
     1261 gcgctactcg agaccgacgc acgcagaagt tacggcatcg accgggtccg cgagctcgtg
     1321 cgcgacgaac gcgcggagct cgcgcggcaa ggtgcctcac tgcgagcgcc gggcacgcgc
     1381 gtcgaagccc tggcgaccat gctcctcgcg gacggtagcc gaatcgagct cacgctggag
     1441 ccggacggct ttcgggtcgc cgccgccgac acgctacccg ccgctgcgca gacgcccgtt
     1501 gaggctttag acggcctgcg gcgcgcgctc gcacgccgca gttacacgtc gctcctgcgc
     1561 gtcctcagcg cggaggcgcg cgtcgccctc gagacagatt tgcgaacact cgccgcggcc
     1621 ctggaaaatc ccgcgacgct cgacgtgcgc gtccagggcg atcgtgccga ggtctctgtc
     1681 ggcggcggac accaggtgac gctgcgccga gagtcgggca cctggcgtgt ggaggacatt
     1741 caatgagcgc aggaacgaga ctcgggcgac gggccttcgc ggcggcgctc ggtgcgctca
     1801 cgttcgggcc cgagcgcgcc ttcgcgttcg gtgaggccgg cgcgtttcgc gcgcgcttgc
     1861 tcgcggcagg caaaggccgg cccgatgacg cacgcgtcgc ggggacggcg cgctggggtt
     1921 cggagctcgt gcgccgaacg agcgcgccgg cgcacgagga gccccaaacc gtcgctgccg
     1981 atcgccccgc gctctttcgc gagccgttcg ccgtctggtg cggcaccgaa gacgtggggg
     2041 cgctctccct gtcggaggtg agcggcctcg agcgatttct ccggctcggg ggcacgctcg
     2101 tcgtggacga caccgagccc ggctcgggcg cattcgggcg ctccgtgcgg cgcgagctct
     2161 tacgcgcgtt gcccgagtcg ccgccggtgc agctcgaagc gacgcacgtg ttgttcaaaa
     2221 ccttctacct gctcgatcgc ccctacggtc gcgtgctcgg cccgccgcgc gtcgaagcca
     2281 tcgtgcgcgg gcggaacgcc gtcgtcttgt ttttggccca cgacctgctc ggcgcgctgg
     2341 cgcggcgcgg cgacgcctgg gcctacgggg ccgagccggg cggcgcggaa cagcgcgagc
     2401 acgccattcg ttttgcggtg aacatcgcca tgtacgtgct ctgctccgac tacaaagacg
     2461 acgtcgtgca cgctccgttt ttgctgcagc ggcgtggccg agcgcgctag aacccacgca
     2521 cgtgccgaac ctggcgctcg ccgaaggaat gacgcccgtc gccgtgacac tcggcgcgct
     2581 ggtgctggcc gcttgggtgc tgtgggcggc gctcgaggtg aggcggagcg aacgcgccgg
     2641 cgcggccgtg ctcgtgagcg ccctcgtggc ggcgctgtgc gtcgcaggcg ctttttttcg
     2701 ccccacgcgc gtgaacgagc gcggggcgcg gctcgggccg cgcgtcgccg tgctcgtcga
     2761 ccaagcgcgc cgcttgcgcc tccccgccga gcacggcgac cgccgctcgg tcgcgctcgc
     2821 cgcggcggca gcgctcggcc gccgctgggc gcaggcgcaa gtagacgttt atgggttcgg
     2881 cgagcaaaag ctcgtaccac tctcgctcgc gcgtgagagc acgctcggcc agctggggga
     2941 ggagagcgat ctcaccgggg cgctcgccga gctcgccgcc gcaccgggcg aacgcgtgcg
     3001 ggccgtggtc gtggtgagcg acggccgact cgcgcggccc gccgaacgcg tggacgaagc
     3061 cggcctcgcg ctggcgctcg ggacgctcgg cgtgccggtc cacaccgtgc gcgtcaccga
     3121 gcaggcgccc gccgacgcga gcgtgcgcca ggtgagcacg gtcggtgcgg cggtcgcgca
     3181 ccagccgctc gtcttgcacg tgacggtcgg ctgcgccggc ggcctcaatt gcgacgaagt
     3241 tcccgtcgtc gtgcgggagc tcaggcaggg ttcgtcgccc gccgagctcg ctcgcggtac
     3301 cgcgcacgca agcacgggcg aagcgacgat cgacctcgag gtgacgatcg agcgcgccgg
     3361 ccagcgggtg atcgaagtcg cgatcgagcc acaggccggc gaccgcgtgc ccgagaacga
     3421 ccatcgcttg ctcacgctcg acgtgcggcg cgagcgcgtg cgcctgctgc acgtcgcggg
     3481 taggccgacg tacgacgtgc gccagctgag gctctggctc aaagcgaatg aatcgattga
     3541 tttggtcgct ttcttcatcc tgcgcacgaa cggcgatcag ccgaacgtcg tcgacgacac
     3601 gagcgagctt tcgttgatcc catttccggt cgacgcgctc ttcacgcagc atctgccgac
     3661 gttcgacgcc gtgatgctgc aggacatcga cgccgtcgag tacaagctcg agccgtactt
     3721 gcctgcgctc gaagcgtacg tccgctcggg cggcgggctc atcatggtgg gcggcccctc
     3781 ggcgttcgcg ggcggcggtt acgccggctc gccgctcgag cgcgtcttgc cggtcgagct
     3841 gccgcgcagc ggcgaaccct acgatttgcg cggtttcgtg ccgcgttaca ccgcggccgg
     3901 gcgcgtggcg ccggtgctcg gcggcgtgcg gcagctgctc ggcgaggacc tgccgctgat
     3961 ggagggttcc aacacgctcg gtaagccgcg gccgggctcg atcgtactct gggagcatcc
     4021 cgaccggcgt gtgggcgaca gcgcgatgcc ggtgctcgcg ctcggggaga tgggcgacgg
     4081 ccgttcgatt gcgctcggcg tggacgcgac gcacgagctc ggcttcggcg agctcgccga
     4141 gcgcacgtcg gggcgggcgt acggagcgct ctgggacggc ctgctcggct ggctcatgcg
     4201 cgatcctcgt tacgaagccg gtcgcgtctc gctcgacggc ccctgcattg cgggtgagcc
     4261 ggcgtcgt
//
LOCUS       DATIML010000789         1723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5078182, whole genome shotgun sequence.
ACCESSION   DATIML010000789 DATIML010000000
VERSION     DATIML010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5078182"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VLJ38_13570"
     CDS             <1..299
                     /locus_tag="VLJ38_13570"
                     /inference="COORDINATES: protein motif:HMM:NF015665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP binding domain-containing protein"
                     /protein_id="HSU40600.1"
                     /translation="NTKVVDIVHELQQFGIEPIIHDPLVEAEGHSAEAPLRMQPWSEF
                     TGLDALILAVPHRQILQLPRQELFGAVRENGLFMDLKGAIPPSEVRPDLKYWSL"
     gene            303..1433
                     /locus_tag="VLJ38_13575"
     CDS             303..1433
                     /locus_tag="VLJ38_13575"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU40601.1"
                     /translation="MTRFETLGSSLRSSPQRWLVTGAAGFIGSHLVEALLRLNQEVVG
                     LDNFATGHAANLDDVRARVGAEHAARFRFIEGDVRDRATCLTALEGVSLVLHEAAIGS
                     VPRSMDDPWTTHSNNVDGFVTLLLAAREAGARRVVFASSSSVYGDDKHSPKLESQLGR
                     PLSPYATSKLIDEIYADTFARTHGIDTVGLRYFNVFGPRQDPNGAYAAVIPRWTEALM
                     TGKQCVVYGDGSTSRDFCFVENVVQANLLAALAPENDVAPRVFNVAYGARTTLLELFD
                     GLRERAATFRREAASAVLKHDPPRAGDIAHSLAAIDRARACLGYEPAFDLRRGLDATV
                     GWYAAHAGLSASNAAPSTRSLKENHDVLAHGHQQVHHLSHSR"
     gene            1378..1683
                     /locus_tag="VLJ38_13580"
     CDS             1378..1683
                     /locus_tag="VLJ38_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSU40602.1"
                     /translation="MTYSRTDINKSTIFRIRGELDALSAPELRPVLDHMIEEGRRDIT
                     VDLSDLRLIDSSGVGALVGLYKRVRAAGGAVRFVGVTAQPLVIFKMLRLDMVFGLPA"
BASE COUNT          274 a          618 c          547 g          284 t
ORIGIN      
        1 ggaacacgaa ggtggtcgac atcgtgcacg agctgcagca attcggcatc gagcccatca
       61 ttcacgatcc gctcgtcgag gcggaggggc acagcgccga agctccgctg cgcatgcagc
      121 cgtggtcgga gttcacgggc ctcgacgcct tgatcctcgc cgtgccccat cggcagatcc
      181 tacaattgcc ccgccaggag ctcttcggcg ccgtgcgcga aaatggccta ttcatggact
      241 tgaaaggggc cattccaccg agcgaggtgc gcccggacct caagtactgg agcctctgag
      301 tcatgacgcg tttcgagacg ctcggctcga gtctccgctc gagcccgcaa cgctggctcg
      361 tcacgggtgc cgccggtttc atcggctcgc atctggtcga ggcgctgctg cgcttgaatc
      421 aagaagtggt gggcctcgac aacttcgcga ctggacacgc cgcgaacctc gacgacgtcc
      481 gagcccgcgt cggcgccgaa catgccgcgc gttttcgctt catcgagggc gacgtgcgcg
      541 accgcgccac ctgcctcacg gcgctcgagg gcgtgagcct cgtgctgcac gaagccgcga
      601 tcggctcggt gccgcgctcg atggacgacc cctggacgac gcactcgaac aacgtcgacg
      661 gcttcgtgac gctgctcctc gcagcgcgcg aagcgggcgc tcgccgcgtc gtcttcgcct
      721 cgtctagctc cgtttacggg gatgacaagc acagcccgaa gctcgagagt caactcggcc
      781 gtccgctctc gccctacgcc acgagcaagc tcatcgacga gatctacgcg gacaccttcg
      841 cgcgcacgca cggaatcgac acggtgggcc tgcgttattt caacgtcttc ggcccgcggc
      901 aagatccgaa cggcgcgtac gccgccgtga tcccgcgctg gaccgaggcg ctcatgacgg
      961 gcaagcagtg cgtcgtctac ggcgacggca gcacgagccg cgacttctgc ttcgtggaaa
     1021 acgtagtgca ggcgaacttg ctggcggcgc tcgcgcccga aaacgacgtg gccccgcgcg
     1081 tcttcaacgt cgcctacggc gcgcgcacca cgctgctcga gctgttcgac gggctgcgcg
     1141 agcgcgcggc gacgtttcgg cgcgaagcgg cgagcgccgt cctgaagcac gacccgccgc
     1201 gcgccggcga catcgcccac tcgctcgccg cgatcgatcg cgcccgcgcc tgcctcggct
     1261 acgaacctgc tttcgacctc cgccgcgggc tcgacgccac ggtcggctgg tacgccgcgc
     1321 acgcaggtct ctctgcgtcg aacgcggccc cgagcactcg ttcgctcaag gaaaaccatg
     1381 acgtactcgc gcacggacat caacaagtcc accatctttc gcattcgcgg tgagctcgac
     1441 gcgctttcgg cgccggagct ccgtcccgtg ctcgatcaca tgatcgaaga gggccgccgc
     1501 gacatcaccg tcgatctctc ggatcttcgc ctcatcgaca gctcgggcgt gggcgcgctc
     1561 gtcggcctct acaagcgcgt gcgcgcggcc ggcggcgcgg tgcgcttcgt gggcgtgacc
     1621 gcccagccgc tcgtgatctt caagatgctg cggctcgaca tggtgttcgg gctgcccgcc
     1681 tgaaccagga atcggcgcgc aggccgcgcc cctcagcgtt cgt
//
LOCUS       DATIML010000790         4801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5078408, whole genome shotgun sequence.
ACCESSION   DATIML010000790 DATIML010000000
VERSION     DATIML010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4801
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5078408"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1497)
                     /locus_tag="VLJ38_13585"
     CDS             complement(<1..1497)
                     /locus_tag="VLJ38_13585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSU40603.1"
                     /translation="MIAFPFFPMPSEATRKLIRARLAAEIGRIERSAPTRVALVYPSP
                     YHVGMSSLGYQSVYAAIQRMPGFACERAFLPDEGDRPGATIERPVTYETLSELGQFGV
                     LAVSVAYEMELAGLVRILDAAGIPAFASERDERAPFILAGGPLTFSNPLPLAPFVDAI
                     VMGEGEGVTERCLELIADARTKADAIAALANEPHVFVPAIHGDTLPSPGTCDDALLPA
                     TSVIRTPHTELSNMFLIEAERGCSRGCTYCVMRRSTNGGMRLVPKETIFERIPKDAHK
                     VGLVGAAVSDHPRIVEIVTTLAERGLRVGLSSLRPDRLKDEFVHALKLAGYKTLTTAL
                     DGPSERLRDLIERRGREPHYVQAAERAKKHGMDCLKLYLMVGLPGETDADIDECVAFV
                     TELSKIVPIALGVAPFCSKRKTPLDNMPFAGVRIVEDRLARLRHGLKGRADVRPTSAR
                     WAWVEWVLAQGGRPEGAAVAAAVRTGGRFADYRRVFGELGKTPDGAGYA"
     gene            1620..2864
                     /locus_tag="VLJ38_13590"
     CDS             1620..2864
                     /locus_tag="VLJ38_13590"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HSU40604.1"
                     /translation="MAAQPEISSLVYDWNAPEPRAPQRRVALLDDTLRDGLQSTAVRQ
                     PTLDERSELLVAMRRAGIDAVNLGLPAVSFGAASAIVRLAKEAAALGLGVVCAGRTLE
                     ADMRAIVEVAEQSGVALEGHAFVGASAIRAKVEGWELGVLQARTASAIGTLARAGLSA
                     AFVTEDTTRSQPEALRVLFATALDAGATRLCLCDTVGHATPAGVRRLVGFTRAFLESR
                     RQNVALDWHGHADRGLALANALAALAAGVDRIHGTALGVGERAGNTPLELFALNLSLD
                     GAWPEDLTPIAEYCQRAAALLGVEIPANHPLVGAGAFRTATGVHAAAIRKAERQAAWL
                     SERVYGAVPSSAVGRTQEVCIGPMSGRANVEHWLSLRGLSLDEALIQRLLLCARASDH
                     VLEDAEVLEILARERANTAEER"
     gene            2939..4177
                     /locus_tag="VLJ38_13595"
     CDS             2939..4177
                     /locus_tag="VLJ38_13595"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HSU40605.1"
                     /translation="MPLNAYQTTNHYLERAFDLLGLPERLRTALLTPSREIRVELIIE
                     LDDGSLGHYIGYRVQHDDSRGPFKGGLRYHPDVDLDEVRSLASLMTWKTAVIDVPFGG
                     AKGGIQVDPRQLTRRELERLTRRFVEQIAPVIGPNTDIPAPDMNTNPQVMGWFFDEYS
                     RRSGFSPAVVTGKPLELHGSLGRDAATGRGCLFAVREVLAAAGKKLEGTSFAIQGFGN
                     VGSWLARLLHERGARVVAVSDLKGGVFKGDGLDVPALFQHARATGSVSEFPGAEALSN
                     QELLKVECDVLVPAALGHVLHEGNAREIRAKYVLEAANGPTTAEADQIFSERGITCIP
                     DIWANAGGVTVSYFEWTQNTQKLKWSEDLVNDGLEKHMVDAHRAIAACMDEYKCSMRT
                     AAFVVGVRRVKEATELRGIG"
     gene            4164..>4801
                     /locus_tag="VLJ38_13600"
     CDS             4164..>4801
                     /locus_tag="VLJ38_13600"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HSU40606.1"
                     /translation="MASVKRAARPPSGSRSGATPRQNEASVRHGVVRRAAPAMRGGAP
                     AAQRGAVPGRPAVAPGRKGAPAAPAVRPPRDRRALSHVGGAIELEGGSEDERHALRSA
                     LAVEPDETATQAHVHGFHSYPARLHPETARRLIEELSRPGDRVLDPFCGSGTVLVEAR
                     LAGRAALGVDVNPLAIELSELKANGPGAPWVPRLVPLAKRVAEHGDDRRRARA"
BASE COUNT          715 a         1588 c         1770 g          728 t
ORIGIN      
        1 ggcgtagccc gcgccgtccg gcgttttgcc gagctcgccg aaaacacgac gatagtcggc
       61 gaaccggccg cccgtgcgca cggccgccgc cacggctgcg ccctcgggac gcccaccttg
      121 cgccagcacc cattcgaccc acgcccaccg cgcgctggtg gggcgcacgt ccgcgcgacc
      181 tttgaggcca tggcgcaagc gcgcgaggcg gtcttccacg atgcggacgc cggcgaacgg
      241 catgttgtcg agcggcgtct tgcgcttcga gcagaaggga gccacgccga gcgcgatggg
      301 gacgattttg gagagctcgg tcacgaaggc gacgcactcg tcgatgtcgg cgtccgtctc
      361 gccgggcaag ccgaccatga ggtagagctt gaggcagtcc atgccgtgct ttttcgcgcg
      421 ctcggcggct tggacgtaat ggggctcgcg gccgcggcgt tcgatcaggt cgcggagccg
      481 ttcgctcggg ccgtcgagcg ccgtcgtgag cgttttgtag ccggcgagtt tgagcgcatg
      541 cacgaattcg tctttgagcc gatcggggcg caggctcgag aggccgactc tgaggccgcg
      601 ctcggcgagg gtggtgacga tttcgacgat gcgcgggtgg tcgctgacgg cggcgccgac
      661 gaggccgact ttgtgggcat ctttggggat gcgctcgaaa atggtctctt tggggacgag
      721 gcgcatgccg ccgttcgtgg agcggcgcat gacgcagtag gtgcaaccgc gcgagcagcc
      781 gcgttcggcc tcgatcaaga acatgttcga gagctcggtg tgcggcgtgc ggatcacgct
      841 cgtggcgggc aagagcgcgt cgtcgcaggt gccggggctc ggcagcgtgt cgccgtggat
      901 ggcggggacg aagacgtgcg gctcgttggc gagcgcggcg atggcgtccg ctttggtgcg
      961 cgcgtccgcg atgagctcga ggcagcgctc ggtcacgccc tcgccttcgc ccatgacgat
     1021 ggcgtcgacg aacggcgcga gcggcagcgg gttcgaaaac gtgagcggcc cgcccgcgag
     1081 gatgaacggc gcgcgctcgt cgcgctcgct cgcgaacgcg gggatgccgg cggcgtcgag
     1141 gattcgcacg aggccggcga gctccatttc gtaggcgacg ctcacggcga ggacgccgaa
     1201 ttggccgagc tcggagagcg tctcgtacgt gacggggcgc tcgatcgtcg cgccgggacg
     1261 gtcgccctcg tcggggagaa acgcgcgctc gcaggcgaaa cccggcatgc gctggatcgc
     1321 ggcgtacacg ctctggtagc cgagcgagct catgccgacg tggtagggcg acggatagac
     1381 gagcgcgacg cgcgtcggag ccgagcgctc gatgcgaccg atttcggccg cgaggcgcgc
     1441 gcggatgagc ttgcgggtgg cttcgctcgg catcgggaag aacgggaacg ctatcactcg
     1501 gcgagcgtta agcccgggtc ccgcaagggc ctgcgagcgg ccgggcattt agaggggcgc
     1561 cacggctggt cctaacgtcg ggatttgcga gtcttaaaga gagtgctggg atagggcgct
     1621 tggcggctca gcccgagata tcttcgctgg tttacgattg gaacgcgccg gagccgcgcg
     1681 ctccgcagcg tcgcgtggcg ctgctcgacg acaccctgcg cgatggattg cagagtacgg
     1741 cggtgcggca gccgacgctc gacgagcgct cggagctgct cgtcgcgatg cggcgcgcag
     1801 gcatcgacgc cgtgaatctc gggctacccg ccgtttcgtt cggcgcggcg agcgcgatcg
     1861 tccgcttggc caaagaagcg gcggcgctcg ggctcggcgt cgtgtgcgcg ggtcgcacgc
     1921 tcgaagccga catgcgcgcg atcgtcgaag tggcggagca gagcggcgtc gcgctcgagg
     1981 gtcacgcttt cgtcggcgcg agcgcgatcc gcgcgaaggt cgagggttgg gagctcggtg
     2041 tgctgcaagc gcgcacggcg tcggcgattg gcacgctcgc gcgcgcgggc ctcagcgccg
     2101 cgttcgtgac cgaagacacg acgcgctcgc agcccgaggc cttgcgcgtg ctgttcgcga
     2161 cggccctcga cgcgggcgcg acgcggctct gcctctgtga caccgtgggt cacgcgacgc
     2221 cggcaggcgt acgccggctc gtcggcttca cgcgcgcctt tctcgagtca cgccggcaaa
     2281 acgtcgcgct ggattggcac ggtcacgccg atcgcgggct cgcgctcgcg aacgcgctcg
     2341 ccgcgctggc cgccggtgtc gatcgcattc acggtacggc gttgggcgtc ggcgagcggg
     2401 ccggcaacac gccgctcgag ctcttcgcgc tgaacctgtc actcgacggc gcttggccgg
     2461 aagatctcac gccgatcgcg gagtattgcc agcgcgccgc cgcgctgctc ggcgtcgaga
     2521 tacccgccaa tcacccgctc gtgggggcgg gtgcgttccg cacggcaacg ggcgtacacg
     2581 ccgcggcgat tcgcaaagcc gaacggcagg ctgcatggct ctccgagcgc gtgtacgggg
     2641 ccgtgccgtc ctcggcggtc ggacgcacgc aggaggtgtg catcgggccg atgtcggggc
     2701 gcgcgaacgt cgagcattgg ctgtcactcc gtggactttc gctcgacgag gcgctgattc
     2761 agcggttgct cctctgcgct cgcgcttccg accacgtgct cgaggacgcc gaggtgctcg
     2821 aaatcctggc ccgagagcgc gcgaacacgg ccgaagaacg ctagaaccga gcgcacgccg
     2881 cgcgagcgtg cattgagtcg cgcgggactc cgtgcacgaa tgcgcgggtc aggatgccat
     2941 gccgctgaac gcctaccaga ccacgaacca ttatctcgag cgcgccttcg atctgctcgg
     3001 gctgccggag cggctccgca cggccctcct cacgccgagc cgcgagattc gcgtcgagct
     3061 catcatcgag ctcgacgacg gttcgctcgg tcactacatc ggttaccgcg tgcagcacga
     3121 cgactcgcgc ggcccgttca aaggcggctt gcgttatcac ccggacgtcg acctcgacga
     3181 ggtgcgctcg ctcgcgagcc tcatgacgtg gaagacggcc gtcatcgacg tgcccttcgg
     3241 cggcgccaag ggcggcatcc aggtcgatcc gcggcagctc acgcggcgcg agctcgagcg
     3301 gctcacgcgc cgtttcgtcg agcagatcgc gcccgtgatt ggcccgaaca cggacatccc
     3361 cgcgcccgat atgaacacga acccccaggt gatgggctgg tttttcgacg aatacagccg
     3421 ccggagcggc ttctcgccgg cggtcgtcac gggcaagccg ctcgagctgc acggctcgct
     3481 cggtcgcgac gccgcgacgg gccgcggctg cttgttcgcg gtgcgcgagg tgctcgccgc
     3541 cgcgggcaag aagctcgaag gcacgagctt cgcgattcaa ggcttcggta acgtcggcag
     3601 ctggctcgca cggctgctcc acgaacgggg cgcgcgcgtc gtggcggtga gcgacctcaa
     3661 gggaggcgtg ttcaaaggcg acggactcga cgtgccggcg ctcttccagc acgctcgcgc
     3721 gaccggcagc gtgagcgagt ttcccggcgc cgaggcgctc agtaatcagg agttactcaa
     3781 agtcgagtgt gacgtgctcg tgccggcggc gctcggtcac gtgctgcacg agggcaacgc
     3841 gcgtgagatt cgagccaaat acgtgctcga agccgcgaac gggcccacca cggccgaggc
     3901 cgatcagatt ttctcggagc gcgggatcac gtgcattccg gacatctggg cgaacgccgg
     3961 cggcgtgacc gtgagctact tcgagtggac gcagaacacg cagaagctca aatggagcga
     4021 agacctcgtg aacgacggtc tcgagaagca catggtggac gcgcatcgcg cgatcgcggc
     4081 gtgtatggac gaatacaagt gttcgatgcg cacggcggcg ttcgtcgtcg gcgtgcggcg
     4141 cgtgaaggaa gcgaccgagc tccgtggcat cggttaagcg cgccgcgcgt ccgccgtccg
     4201 gttcgcgctc gggcgcgacg ccgcgtcaga acgaggcgag cgtgcgtcac ggcgtcgtgc
     4261 ggcgcgctgc gcccgcgatg cgtggaggcg cgcccgcggc gcagcgcggt gcggtccccg
     4321 gccgtccggc ggtggcccct ggccgaaagg gcgcgcccgc cgcgcccgct gtgcgtccgc
     4381 cgcgcgatcg tcgcgccctt tcgcacgtcg gcggggcgat cgagctcgaa ggcggcagcg
     4441 aagacgagcg ccacgcgctg aggtcggccc tggccgtcga acccgacgaa acggcgacgc
     4501 aagcgcacgt gcacggtttt cacagctacc ccgcacgcct tcaccccgag accgcgcggc
     4561 gcctgatcga agagctctcg cgtcccggcg atcgcgtgct cgatcccttt tgcggcagcg
     4621 gcaccgtgct cgtggaagcg cggctcgccg gtcgcgccgc gctcggcgtc gacgtgaatc
     4681 cgctcgcgat cgagctcagc gagctcaaag cgaacggccc gggcgcgccg tgggtgccgc
     4741 ggttagtgcc gctcgcgaag cgcgtcgccg aacacggcga cgaccggcgc cgcgcgcgag
     4801 c
//
LOCUS       DATIML010000791         3066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2185762, whole genome shotgun sequence.
ACCESSION   DATIML010000791 DATIML010000000
VERSION     DATIML010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2185762"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VLJ38_13605"
     CDS             <1..195
                     /locus_tag="VLJ38_13605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40607.1"
                     /translation="KAPSCDDSGRAPSATKLSRARRRGLTFPLERVTLENLPMRLGIL
                     SDIHANYEALSAVVEAFKRE"
     gene            274..852
                     /locus_tag="VLJ38_13610"
     CDS             274..852
                     /locus_tag="VLJ38_13610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSU40608.1"
                     /translation="MVEATILGNHDAAVAGRMDYSYYYEAARHALDTHAQLLSEENMQ
                     WLKGLPYQIKFDEIGVHLCHGSPVRLEEFEYIFAPEQARECLPIFDELGHITLIGHSH
                     LCKVFALTKTTVEELPPIDFELQPDRKYIVSVGSVGQPRDYDNRASYTVYDSDKKRFE
                     FKRIEYDIETAADKVLRAKLERNFAHRLFIGV"
     gene            complement(936..2480)
                     /gene="cysS"
                     /locus_tag="VLJ38_13615"
     CDS             complement(936..2480)
                     /gene="cysS"
                     /locus_tag="VLJ38_13615"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HSU40609.1"
                     /translation="MPALPSLYNTLTRRVEAIEPVRPGEVGVYCCGPTVYDVPHAGHA
                     RSALVPDLLVRRLRALGVKVNYVRNVTDVEDKILERAAKNGEEPLALSSRMTEIYQTQ
                     MRASGCLVPDHEPKVSEHLPEIHAIIQKLIDREAAYAVEVRPGVRDVYFAVRNFAGYG
                     KLSRRKIDELLAGARVETSALKRDPLDFALWKGAAADEWGWESPWGHGRPGWHIECSA
                     MCTHYLGQPFDVHAGGMDLIFPHHENEIAQSEAAYPDQAPLARIWVHNGFLNVDREKM
                     SKSLGNFVTVGDVFERNDPEALRLFFLSAHYRGPIQFESEQLAGGRVVFPGVDEAERR
                     MDHAFSAVRRLQGLVSLGLTVPAKLSPELLAYRDASVRAVQAGEAALDDDLNTPVALA
                     SFTELTHLGHEVADSAAKRKKDPSYAGGAGAAAQFLLTAILRLGAELGLLQCAPAEYA
                     ARTRERRLRLRGLTAEAIDQKVAERALARRSKDFARADALRGELGALGIAVQDAGDAS
                     EWTIEQ"
     gene            complement(2531..>3066)
                     /locus_tag="VLJ38_13620"
     CDS             complement(2531..>3066)
                     /locus_tag="VLJ38_13620"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HSU40610.1"
                     /translation="SMFMHGGWAHLGSNMLFLYIFGDNVEDSIGHGRYLAFYLLSGIG
                     AAAAQVLTNPASQLPMVGASGAIAGVLAGYLVLYPSAPITLLVPPPLLFFTGLFIVMP
                     AYVVIGVWFALQLFSGVGSLGQAETGGVAFFAHVGGFLTGLVLVKPLQSGRPRYDHDR
                     WRGWRPPERAAARGRWS"
BASE COUNT          554 a         1011 c          997 g          504 t
ORIGIN      
        1 aaagcccctt cctgcgatga ttctggacgt gcaccctcgg cgaccaaact ctcgcgggcg
       61 agaagacgcg gccttacctt ccctcttgag cgtgttactc tcgaaaatct ccccatgcgc
      121 ctcggtatcc tgagcgacat ccacgccaac tacgaagcgt tgagtgccgt ggtcgaagcg
      181 ttcaaacgcg aatagatcga caagtactat tgcctcggtg acaccgaagg gtacggcggc
      241 tcgccaaacg agtgcgcgga catcgtccgt ggcttggtcg aagcaacgat cctcggcaac
      301 cacgacgcag ccgtcgcggg ccgaatggac tactcgtatt actacgaggc cgcgcgccat
      361 gcgctcgaca cccacgcgca gctgctctcc gaagagaaca tgcagtggct gaagggcttg
      421 ccttaccaga tcaagttcga cgagatcggc gtgcacctgt gccacggctc gccggtgcgc
      481 ctcgaagagt tcgagtacat cttcgccccc gaacaagcgc gcgagtgcct gccgatcttc
      541 gatgaactcg ggcacatcac gttgatcggt cactctcacc tttgcaaggt gttcgcgctc
      601 accaaaacca cggtcgaaga gctgcctccg atcgacttcg agctgcaacc cgatcgcaag
      661 tacatcgtca gcgtcggctc cgtcgggcag ccgcgcgact acgacaaccg cgcgagctac
      721 accgtgtacg acagcgacaa gaagcgcttc gagttcaagc gcatcgagta cgacatcgag
      781 acggccgcgg acaaagtgct gcgcgcgaag ctcgagcgta acttcgcgca tcgtttgttc
      841 atcggcgtgt gacgcacgcg gcgtgagcac ggcgtggcac ggcgagccca cgcgccgtaa
      901 cggtttcgtg ctgcgcgttc acgccgcgcg tcacgtcact gctcgatggt ccactcactc
      961 gcgtcgccgg cgtcttgcac cgcgataccg agcgcgccga gctcgccgcg cagcgcgtcg
     1021 gcgcgcgcaa agtccttgct gcggcgcgcg agagcgcgct cggccacctt ctggtcgatg
     1081 gcttccgccg tgagaccgcg gagcctgagc cggcgctcgc gcgtccgcgc ggcgtactcg
     1141 gcgggcgcac actgcagcaa gccgagctcg gcgccgagcc gcaggatcgc ggtcagtaga
     1201 aactgcgcgg cggcgcccgc accccccgcg tacgacggat cttttttgcg tttggcggcc
     1261 gagtcggcga cctcgtgccc gaggtgcgtg agctcggtga acgacgcgag cgcgacgggc
     1321 gtgttgaggt cgtcgtcgag cgcggcttcc ccggcttgta cggcgcgcac cgacgcgtcg
     1381 cggtacgcga gcagctcggg actcaacttg gccggcaccg tgaggccgag gctcaccaag
     1441 ccttggagcc gccgcacggc ggaaaaggcg tgatccatgc gccgttcggc ttcgtcgacg
     1501 ccggggaaca cgacgcgccc gccggcgagc tgctccgatt cgaattgaat cggcccgcgg
     1561 tagtgcgcac tcaaaaagaa gagccgcagc gcttccggat cgttgcgctc gaacacgtca
     1621 ccgaccgtga cgaagttgcc gagcgacttg ctcatcttct cgcggtcgac gttgaggaaa
     1681 ccgttgtgca cccagatgcg cgcgagcggc gcttggtcgg ggtacgcggc ttcactctgc
     1741 gcgatttcat tttcgtgatg cgggaagatc aaatccatgc cgcccgcgtg cacgtcgaac
     1801 ggctgtccga ggtaatgcgt gcacatggcc gagcactcga tgtgccagcc cggacgaccg
     1861 tgcccccacg ggctctccca accccactcg tccgctgcgg cgcccttcca caacgcgaaa
     1921 tccaaagggt cgcgcttgag cgcgctcgtc tcgacgcgcg ctcccgccaa aagctcgtcg
     1981 attttgcggc gcgagagctt gccgtaaccc gcaaaatttc gcacggcgaa gtaaacgtcg
     2041 cgcacgccgg gtcgaacctc cacggcgtac gccgcctcgc ggtcgatgag cttctggatg
     2101 atggcgtgga tctccggcag gtgctcgctc accttcggtt cgtggtcggg cacgagacag
     2161 ccgctcgcgc gcatctgcgt ttggtagatc tcggtcatgc ggctcgacag cgcgagcggc
     2221 tcttcgccgt tcttcgcggc gcgctcgagg atcttgtctt cgacgtcggt gacgttgcgg
     2281 acgtagttca ccttcacgcc gagcgcgcgc aggcggcgga cgagcaagtc gggcacgagc
     2341 gcggaacgag cgtgcccggc gtgaggcacg tcgtagacgg tcggaccgca gcagtagacg
     2401 ccgacttcgc ccggccgcac cggttcgatg gcttcgacgc gacgagtgag cgtgttgtag
     2461 agcgagggca gagcgggcac gggggcttcg gttttagctt gaattctggc tcgcacgcca
     2521 ggctcgccgg ttagctccag cgtcctcgcg cagcggcgcg ttcgggcgga cgccagccgc
     2581 gccagcgatc gtggtcgtag cgtggccggc cgctctggag cggcttgacg agcacgagac
     2641 ccgtcaaaaa tccgccgaca tgcgcgaaga acgcgacgcc gcccgtctcg gcctggccga
     2701 ggctcccgac gccgctgaag agctgcaacg cgaaccacac accaatcacg acgtaagccg
     2761 gcatcacgat gaacaggccg gtaaagaaca gcaaaggcgg cggtacgagc agcgtgatcg
     2821 gtgcgctcgg atagagcacg aggtaaccgg caaggactcc ggcgatggcg cccgaggcac
     2881 cgaccatggg cagctgactc gccgggttcg tgaggacctg agcggcggcc gcgccgatgc
     2941 ccgagagcaa gtaaaaggcg aggtatcgcc cgtggccgat cgaatcctcg acgttatcgc
     3001 cgaagatata gaggaagagc atgttgctgc cgaggtgggc ccagccgccg tgcatgaaca
     3061 tgctcg
//
LOCUS       DATIML010000792         2968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5078611, whole genome shotgun sequence.
ACCESSION   DATIML010000792 DATIML010000000
VERSION     DATIML010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5078611"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VLJ38_13625"
     CDS             <1..337
                     /locus_tag="VLJ38_13625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40611.1"
                     /translation="TAGAREVVVLCRSERLVSRVEFVTSPGERVRAIVTEDGVLERSS
                     TAEEWQLTDAGLGTRSAAELCAALPFAVRVASDSRALPPSDAELAALAEVVPETSAAP
                     RAQNGRAHA"
     gene            330..1271
                     /locus_tag="VLJ38_13630"
     CDS             330..1271
                     /locus_tag="VLJ38_13630"
                     /inference="COORDINATES: protein motif:HMM:NF020130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HSU40612.1"
                     /translation="MLDLRISSLGTYLPRRLVDNAALVATYPELGERDLDRVGVVSRG
                     EADDDEDVPTMAVRAARTALERAEVAPDTLDFLLLVNWSERRYVPDIAPRVQALLGAS
                     KAFAFDLGCACAGFIYALSLAHGYLQNPRFRRGLIVASDHSRRRVRPGSRASLLFGDG
                     AAAAVVATHVERGFRLVDYELGTDGTRHELMDVDRDGYLVTHVRQREVNELAVASLLR
                     AGRSLLARQRLTFADVDYIVPHSGTAGIQTLLAETLSLPRERILTNLPSVGNVTAASI
                     PTALEHFVQNGTLRAGHRVLMLAVGVGWQYVGGLVEL"
     gene            1268..1999
                     /locus_tag="VLJ38_13635"
     CDS             1268..1999
                     /locus_tag="VLJ38_13635"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU40613.1"
                     /translation="MSAFTGRHCVVTGVTSGIGRATTLKLLAEGATVTGLGRSEEKLL
                     ALAAQVGAKFDFLVADLAVAGERERVAAALRRARRPVDVFVSNAAEAAYASPLAIAPH
                     DLLRLFEVNVCAPLELCQAVVPAMPASGHVVQLSSVAARFVPNAKFGPYAVTKAAVTG
                     LIDALRLELAPRGIRVTSIAPGLVDTPIYDDLSGFTDLKKKLGEQVPNWLKPEDIAET
                     VAWVLSRPPNVVVTELSVMPRGQAR"
     gene            2007..2435
                     /locus_tag="VLJ38_13640"
     CDS             2007..2435
                     /locus_tag="VLJ38_13640"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSU40614.1"
                     /translation="MDERDPTEQTEAYVDGLFGAGAGKKHLRFLERIEHPGLREQILR
                     YHALEADTRALSLEENYLIGLAVLAALGRHDTAAMFAKTLLHLGTPKAKLLETIARLT
                     MWIGGLPAAETAFRVQRAIAEYERDGLGSLAVWLPEGGAR"
     gene            2432..>2968
                     /locus_tag="VLJ38_13645"
     CDS             2432..>2968
                     /locus_tag="VLJ38_13645"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU40615.1"
                     /translation="MTHAQLLAGRRGVVLGVSGENGVGFHAARAFRAAGAEVIVTHRE
                     PRREVVAPLAAALGCERIELDFRDERAVAHAFSELGRRHERLDFLVHTLVHVPDGVLE
                     KPVTELSASDFAEVLELGARSLLVACRYALPLLRRSDAPRVVTLLSPGSDRAVPHYHA
                     VGIMKGALAATVRYLALEL"
BASE COUNT          426 a         1047 c         1031 g          464 t
ORIGIN      
        1 gacggccgga gcgcgcgaag tcgtcgtgct gtgccggagc gagcggctgg tttcacgcgt
       61 cgaattcgtc acgagccctg gcgagcgcgt gcgcgccatc gtgacggaag acggagtgct
      121 cgagcggagt agcaccgccg aagagtggca gctcacggac gcaggtctcg gcacgcgttc
      181 ggcggccgag ctttgcgcag cgctgccgtt cgcggtgcga gtcgccagcg atagccgagc
      241 gctcccgccg agcgacgccg agctcgccgc gctcgccgag gtcgtgcccg aaacctcagc
      301 cgcgccgcgc gcacagaacg ggagagccca tgcttgatct gcgtatttcg agtctcggga
      361 cgtacttgcc gcgccggctc gtcgacaacg cggcgctcgt cgcaacgtac ccggagctcg
      421 gcgagcgcga cctcgatcgc gtcggcgtcg tgagtcgagg tgaggccgac gacgacgaag
      481 acgtgccgac gatggccgtg cgcgccgccc gcacggcgct cgagcgcgcc gaagtcgcgc
      541 ccgacacgct cgatttcctg ctgctcgtca attggagcga acgccgttac gtgccggaca
      601 tagcgccacg cgtccaggcg ctgctcgggg caagcaaggc tttcgccttc gatctcggct
      661 gcgcgtgcgc ggggttcatt tatgcgctct cgctcgcgca cggctaccta caaaacccgc
      721 gcttccgccg cgggctcatc gtggcctcgg atcactcgcg ccgtcgcgtg cgtccgggca
      781 gccgcgcttc gctcctgttc ggcgacggcg cagcggcggc cgtggtggca acgcacgtgg
      841 agcgcggctt ccggctcgtc gactacgagc tcggcacgga cggtacgcgg cacgagctca
      901 tggacgtcga ccgcgacggc tacctcgtca cgcacgtgcg ccagcgcgaa gtgaacgagc
      961 tcgccgtcgc ttcgctgctg cgcgccggcc ggagcttgct cgcgcgccag cgcctcacct
     1021 ttgccgacgt ggactacatc gtgccgcact cgggcacggc cggcattcaa accctgctcg
     1081 ccgagacgct ctcgctgccg cgcgaaagga tcctcacgaa cctgccgagc gtcggcaacg
     1141 tcacggcggc ctcgattccc acggcgctcg agcacttcgt gcaaaacggt acgctgcggg
     1201 cggggcaccg cgtgctcatg ctcgcggtcg gcgtcggctg gcagtacgtc ggggggctcg
     1261 tcgagctatg agcgcgttca cggggcggca ctgcgtcgtg acgggcgtca cctcgggcat
     1321 cggccgcgcg acgacgctca agctcttggc cgagggggcg acggtcacgg ggctcggacg
     1381 cagcgaagag aagctcttgg ccctcgcggc gcaggtggga gcaaagttcg atttcctcgt
     1441 cgccgatctc gcggtcgcgg gcgagcgcga gcgcgtcgct gctgcgctcc ggcgcgcgcg
     1501 ccgtccggtc gacgtgttcg tgagcaacgc agcggaagcc gcttatgcga gcccgcttgc
     1561 catcgcgcct cacgatttgc tgaggctctt cgaggtcaac gtgtgcgcgc ccctcgagct
     1621 ctgccaggcg gtcgtgccgg cgatgccggc ttcggggcac gtcgtgcagc tctcgtccgt
     1681 ggcggcgcgc ttcgtcccga acgcgaaatt cggtccctac gcggtgacga aagccgccgt
     1741 caccgggctc atcgacgccc tgcggctcga gctcgcgccg cgcggcatcc gcgtcacgtc
     1801 gatcgcgccc ggcctcgtgg acaccccgat ctacgacgac ctcagcggct tcaccgacct
     1861 caaaaaaaag ctcggggagc aggtgccgaa ctggctcaaa cccgaggaca tcgccgaaac
     1921 cgtcgcgtgg gttctgtcac gaccgccgaa cgtggtcgtg accgagctca gcgtcatgcc
     1981 gcgcggacag gcgcgctgag ggaatcatgg acgaacgcga tccgaccgaa cagaccgagg
     2041 cctacgtcga cggcctcttc ggcgccggcg ccggcaagaa acacctgcgc ttcctcgagc
     2101 gcatcgagca ccccggcctg cgcgagcaga tcctccgcta ccacgcgctc gaggccgaca
     2161 cgcgtgcgct ttcactcgag gaaaattatc taattggcct cgccgtgctc gcggcgctcg
     2221 gccgccacga caccgcggcg atgttcgcca agacgctgct gcacctcggc acaccgaaag
     2281 cgaagctgct cgaaacgatc gcccgcctca cgatgtggat cggcgggctc cccgcggccg
     2341 aaacggcctt tcgcgtgcag cgagcgatag ccgagtacga gcgcgacggg ctcggttcgc
     2401 ttgccgtgtg gctgccggaa ggcggcgcgc gatgacgcac gcgcagctgc tcgcgggccg
     2461 gcgtggggtc gtgctcggcg tgtccgggga aaacggcgtg ggtttccacg ctgcgcgcgc
     2521 gtttcgcgcg gcgggcgccg aggtcatcgt cacgcaccgc gagccgcggc gcgaggtcgt
     2581 ggcgccgctc gccgccgcgc tcggctgcga gcgcatcgag ctcgatttcc gcgatgaacg
     2641 cgccgtcgcg cacgcgttca gcgagctcgg ccgccgtcat gaacggctgg attttctagt
     2701 gcatacgctg gtgcacgtgc cggacggcgt gctcgaaaag ccggtgacgg agctgtcggc
     2761 gtccgatttc gccgaggtgc tcgagctcgg cgcgcgctcg ctcttggtcg cgtgccgcta
     2821 cgcgctgccg ctcttgcgtc gctcggacgc gccgcgcgtc gtgacgttgc tctcgccggg
     2881 cagcgaccgc gccgtgccgc actatcacgc cgtcggcatc atgaaaggcg cgctcgcggc
     2941 gacggtgcgt tacctcgcgc tcgagctc
//
LOCUS       DATIML010000793         4617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4496481, whole genome shotgun sequence.
ACCESSION   DATIML010000793 DATIML010000000
VERSION     DATIML010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4617
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4496481"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..1236)
                     /locus_tag="VLJ38_13650"
     CDS             complement(178..1236)
                     /locus_tag="VLJ38_13650"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HSU40616.1"
                     /translation="MKRSERWQPSAVALVIAGLLGCSRDDLYAITLLAAANAGGHAGS
                     DHAAGAGTGNGASGNGSSGNGSAGSSNAGRAGAADGSSGNAAVGACKSSTLAAGDSNR
                     SVVVDGVTRTYVLHAPSSYDASKPVPLVLDFHGMGGSGTSERTSSPYPSLLDAEGVVM
                     AFPDGKKGPAGTAWNVGPCCVANVDDVAFARALVEQVRGLACIDSQRVYAVGVLTGGG
                     MAHYLGCHAADVFAAIAPAAFDLLAENIDGCTPPRPITVISFRGTADSRVPYEGGPSS
                     LVPGMPLTFLGAEASFEKWAAIDACTGSASVPDANGCAAYTNCGAGSEVILCTKQGGG
                     EDPGDPAVAWPVLKRHTL"
     gene            complement(1233..2300)
                     /locus_tag="VLJ38_13655"
     CDS             complement(1233..2300)
                     /locus_tag="VLJ38_13655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40617.1"
                     /translation="MNRLRCILLVAALVMFSAANARAATVALLRPRSSAPEINEALFR
                     LKGELLAVGLDVALVERPPERDTASPAARAWLDRMANERGFDAVLDVLGEQEPVAVEV
                     WLDERAPSGNENTTPAHTRRELSVTRVVLEPEAQNAAGTLAIRALEVLRSKLVALDWT
                     PKPTPSAPAAAPERALPAPKRHEPSPAFGLEAGLSVRAPGDGVGPLLLPLGRFDWAFR
                     PWLALRLTGAASVTRPTLETTAGAVHLAEQFGLLGLAASPGSRAGITPLLALSAGFLR
                     TAIDAEASLPHVGHRLEHWGFLLDASVGASFALSPHYFLTLAAHVELAEPYAAIHVVD
                     EVVTTIGRPSLLLTLTLGAWL"
     gene            complement(2311..3600)
                     /locus_tag="VLJ38_13660"
     CDS             complement(2311..3600)
                     /locus_tag="VLJ38_13660"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HSU40618.1"
                     /translation="MSDAEQRQAERLAALAEHLRVTVKPHGALALERGLNALRARLGV
                     ERKRPRLALRRALALAVAVSSVALGALLVRAWWPHPRSLLKPVALTRVVGGQILEGGY
                     LSEVGHRGVELDFDEGSTFVLTPGTRGRLRALSADGARFEVDHGTAAFRITPSPERRW
                     IVEAGPFLVSVKGTDFTVVWDPTAERLDVELRRGRVTVSGPVVGDDLGLRPGQHLAVS
                     LPRAETTITEARLGSAPAAAADSGDAAAPTVAVTPSAREAPSSLSVPSSAARPPAAER
                     GWRQALAKGQWDRILADVERAGVTASLQTLSSDDLFVLADAARYRRRPDLARAALLTE
                     RERFPNSPRSLDAVFLLGRVEELRPNGSAQAIARYDEYLAHAPSGTYAAEALGRKMIL
                     VKATAGPERAREIASEYLRRFPNGSYAEAARTLQRVP"
     gene            complement(3597..4199)
                     /locus_tag="VLJ38_13665"
     CDS             complement(3597..4199)
                     /locus_tag="VLJ38_13665"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU40619.1"
                     /translation="MTGRSRRDVSDAEVAEGLTLGEDWALTEAWHRFAPLVLMTAERA
                     LGSRSDAEDVTQDVFSGVFRNVKTLRDPGSLRSFVYSVAVRTLRSHLRYRKLRHWLSF
                     SEPETLLDLRHSVQDVEGREFVRNLYRLLDRLSPRDRLVFILRRVDAMTVEEIASTMD
                     ISISTVKRSFTHASERLSRWIATDPALSERLDAKLAPRSG"
     gene            4339..>4617
                     /locus_tag="VLJ38_13670"
     CDS             4339..>4617
                     /locus_tag="VLJ38_13670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40620.1"
                     /translation="MARSQHQIERRRAKIAQRLRSDPTSTERTSCRHCAAGKSANDGG
                     AAHSITEGDDLAAVIERRSFSAPTPPVTTSSSSLRRMTIRATVCSYRTL"
BASE COUNT          773 a         1598 c         1563 g          683 t
ORIGIN      
        1 tgcggccacg tgagccgacg ttaccggttc cgtccgtcgc tccaacccag ggtggttgcc
       61 aagacgctgc tgctctcatc gaataactcc acgcagtatg gaatgctcgc tgtggccgac
      121 cgattccagt cgcacttaca gtcgcgcgcg ccgcgcaggt tggttcagga aagtggctca
      181 gagcgtgtgg cgcttgagca cgggccacgc gacagcgggg tcgccggggt cttcgccgcc
      241 gccttgcttg gtgcagagga tgacctcgct gcccgcaccg cagttcgtgt acgccgcaca
      301 gccgttggca tccggcaccg atgcgcttcc cgtgcacgcg tcgatcgccg cccacttctc
      361 gaacgatgct tctgcgccga ggaacgtgag cggcatgccc ggcacgagcg acgatgggcc
      421 gccttcgtaa gggacgcgtg agtccgcggt accacggaag gagatcaccg tgatcggtcg
      481 cggaggagtg cagccgtcga tgttctcggc caagagatcg aacgctgcgg gcgcgatggc
      541 ggcaaacacg tccgcagcgt gacaccccaa gtaatgagcc ataccgccgc ccgtcagcac
      601 tccgaccgcg tagacacgct gcgaatcgat gcacgcgagg ccacgcacct gctcgacgag
      661 cgcccgagca aacgccacgt cgtcgacgtt ggcgacacag cagggcccga cgttccacgc
      721 cgtgcccgcg ggtcccttct tgccgtcggg gaacgccatc acgacgcctt cggcgtcgag
      781 cagcgacggg tacggcgagc tcgtgcgctc gctcgttccc gagccgccca tgccgtgaaa
      841 atcgaggacc agcggcactg gtttgctcgc gtcgtagctc gagggcgcgt gcagcacgta
      901 agtgcgcgtg acaccgtcga cgacgacgct tcggttgctg tcccccgcag caagcgtcga
      961 cgacttgcac gcgccgaccg ccgcgtttcc ggagctgcca tcggccgcgc cggctcttcc
     1021 ggcgttactg ctaccggcgc tgccattgcc cgagctgccg tttccggacg cgccgttgcc
     1081 cgtaccggca cctgctgcgt ggtcgctacc ggcatgaccg cccgcgttcg ccgcggctaa
     1141 cagcgtgatc gcgtacaggt catcgcgcga gcagccgagg aggcctgcga tcacgagcgc
     1201 gaccgcgctc ggctgccagc gctcgctgcg cttcacaacc aagctcccag cgtgagggtg
     1261 agcagcaagg agggacgtcc gatcgtggtc accacttcat cgacgacgtg aatggcggca
     1321 taaggttcgg cgagctctac gtgcgcggcg agcgtcagaa aataatgcgg tgaaagcgcg
     1381 aagctcgcgc cgacgctcgc gtcgagcagg aagccccagt gctcgaggcg gtgcccgaca
     1441 tgcggcaagc tcgcttccgc gtcgatcgcc gtgcgcaaga aacccgcgga gagtgccaaa
     1501 agcggcgtga tacccgctcg ggaccccggc gacgcggcga gtccgagcag cccgaattgt
     1561 tcggccaagt ggacggcgcc cgccgtcgtt tcgagcgtgg gacgagtcac ggaagccgcg
     1621 cccgtgagcc gcagcgcgag ccatggacga aacgcccaat cgaagcgtcc cagcggcagg
     1681 agcagcggac cgactccatc accaggcgcg cgcacgctga gtccagcttc gaggccgaac
     1741 gctgggctcg gctcgtgccg cttcggtgcc ggcagcgcgc gctccggcgc ggccgcgggt
     1801 gcgctcggcg tcggctttgg cgtccagtcg agcgcgacga gcttcgaacg caagacttcg
     1861 agcgcgcgga tcgcgagtgt gcccgccgcg ttctgcgcct cgggctcgag caccacccgc
     1921 gtcacgctga gctcgcgccg agtgtgagcc ggcgtcgtat tttcgttccc ggaaggcgcg
     1981 cgctcgtcga gccagacttc gacggcgacc ggctcctgct cgccgagcac gtcgagcacg
     2041 gcgtcgaacc cgcgctcgtt cgccatccga tcgagccagg cgcgcgccgc aggggacgcc
     2101 gtatcgcgct cgggtggtcg ctcgacgagc gccacgtcga gaccgaccgc caagagctcg
     2161 cccttcaagc gaaacagcgc ctcgttgatt tcaggcgcgg aacttctggg ccgtaagagg
     2221 gcgacggtcg cggctcgcgc gttcgcggcg gagaacatca cgagtgcagc gacgagcaaa
     2281 atgcacctca ggcgattcac cgacaaccgc ctacgggact cgctgcaacg tacgcgcggc
     2341 ctcggcgtag ctcccgttcg ggaagcgtcg caggtattcg ctcgcgattt cgcgggcgcg
     2401 ctcggggccg gcggtcgcct tcacgagaat cattttacgc cccaacgctt ccgccgcgta
     2461 ggtgccgctc ggagcatgcg cgaggtactc gtcatagcgt gcgatcgcct gcgcgctgcc
     2521 gtttggccgc agctcctcga cgcgaccgag caggaagacc gcgtcgagcg agcgcggcga
     2581 gttcgggaag cgctcgcgct cggtcagcaa cgccgcgcgc gcgagatccg gccggcggcg
     2641 gtagcgcgcg gcgtcggcca gcacgaacag gtcgtcgctc gacagcgtct gcaagctcgc
     2701 cgtgacgccc gcgcgctcga cgtcagcgag gatgcggtcc cactgtccct tcgcgagcgc
     2761 ttgtcgccag ccgcgctcgg ccgcgggcgg ccgcgcagcc gaactcggaa cggagaggga
     2821 cgagggagct tcgcgcgcag aaggcgtgac ggcgaccgtc ggcgcggcag cgtcgccgct
     2881 atcggcagca gccgccggcg ccgagccgag ccgcgcttcc gtgatggtcg tctccgctcg
     2941 cggcaggctg accgccagat gctggcccgg tcgcaagccg aggtcgtccc cgacgacggg
     3001 accgctgacc gtgacgcgcc cgcgcctgag ctcgacatcc aaccgctcgg cagtcgggtc
     3061 ccagaccacg gtgaaatcag tccccttcac ggacacgagg aagggtcccg cctcgacgat
     3121 ccagcgtcgc tcgggactcg gggtgatccg gaaagccgcc gtcccgtggt cgacctcgaa
     3181 gcgtgctccg tcggcgctca gtgcacgcaa gcgtccacgc gtgcccggcg tcagcacgaa
     3241 cgtgctgcct tcgtcgaaat cgagctccac accgcgatgg ccgacctcag agaggtagcc
     3301 gccttcgagg atttgaccgc ccacgactcg tgtcagcgcc acgggcttga ggagcgatcg
     3361 cgggtgtggc caccaggcac gcacgagcaa cgcgccgagc gcgacgctcg acaccgcgac
     3421 ggcgagcgcg agcgcgcgtc gaagcgccag gcgaggacgc ttgcgctcga cgccgaggcg
     3481 cgctctgagc gcgttgagcc cgcgctcgag cgctagcgcg ccgtgcggct tgaccgtgac
     3541 ccgcaggtgc tcggccaagg ccgcgagccg ttccgcttgc ctttgctcgg cgtcgctcat
     3601 cctgacctcg gcgcgagttt ggcgtccaaa cgctcggaca gcgcgggatc ggttgcgatc
     3661 cagcgggaga gccgctccga agcgtgcgtg aacgagcgtt tcaccgtcga gatcgagata
     3721 tccatcgtgc tggcgatctc ctcgacggtc atcgcgtcca cacgccgcaa gatgaagacc
     3781 agcctatcgc gcggcgacag gcgatcgaga aggcggtaca aattcctgac gaactcgcgg
     3841 ccttcgacgt cctgcacgga gtggcggagg tcgagcagag tttccggctc gctgaacgac
     3901 agccaatgcc ggagtttccg atagcggagg tgggacctga gcgtacgcac ggcaacggag
     3961 tagacgaagc tccgcagact ccccggatcc cgcagcgttt tcacgttgcg aaacacgccg
     4021 ctgaagacgt cctgcgtcac gtcttccgcg tcgctcctcg agccgagcgc gcgctcggcg
     4081 gtcatcagca cgagcggcgc aaagcggtgc cacgcctccg tgagggccca gtcttcgccg
     4141 agcgtcagtc cttccgcgac ttccgcgtcc gacacgtcgc gacggcttcg gccggtcacg
     4201 agagctaacg gcgtgcggga atggttggac atcgtcgcag tgcgtgggac gcacagcagt
     4261 cgccggagcg ctgcgaaatg gttcaggggc cggtgggccg ccagcgcggg aaccggcgca
     4321 caaacgagct cgcacagggt ggcacgctcg cagcatcaaa tcgaaaggcg ccgagcgaag
     4381 attgctcaaa gattgcgcag tgatccgacg tcgacggaac ggacgagctg ccgccactgc
     4441 gccgccggca agagcgcgaa tgacggcggc gcagcgcact caatcaccga gggtgacgac
     4501 ctcgccgcgg tgatcgagcg ccgctctttc agcgcgccca cgccgccggt cacgacatca
     4561 tcttcgtcgc ttcggcgaat gactattcga gcaacggtat gcagctatcg caccctt
//
LOCUS       DATIML010000794         2312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1612546, whole genome shotgun sequence.
ACCESSION   DATIML010000794 DATIML010000000
VERSION     DATIML010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612546"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1202)
                     /locus_tag="VLJ38_13675"
     CDS             complement(<1..1202)
                     /locus_tag="VLJ38_13675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40621.1"
                     /translation="MPSAASPFGRRVTLGLGAGLLIFGCKAKAKPNAAPAAPSASASS
                     APILAAAPERCRALGTGASLVVGEVDRPAREPGAEPDTDDADDEEALQPFATRVDSAF
                     VLGNDFAVGGLNTQRAKTEAFLALVPLDGSPGRRVGLGAVHGDVDPPLVTGADGTLLV
                     AVADMDAGGGMLRISAVDVHADKPHGELSITGVEHDTGAAFAVGEHGALLVWGARGKR
                     GAVLKTLAVKPDKLSGTAPGDELKGTDDAESPVLVARPGGFWLAWVSEQAASAAHPDA
                     GVHDPVPHDAGTRNANSRDANTHDAGAQQGSADGPERLVDVGPRALLVLSLDANGKPT
                     APARAVSGPRAHVVGFSAALLPDAALSLTWREDDAAPGVESGPPELARVGLDGAVQRA
                     KVEDEELSA"
     gene            1284..>2312
                     /locus_tag="VLJ38_13680"
     CDS             1284..>2312
                     /locus_tag="VLJ38_13680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40622.1"
                     /translation="MSDRELTRTYEPNPVLRAVYRPFFDKIQVDEAWVAAVRDLAARG
                     SVVYVLRNLNFIDFLALDYLTKRYGLPRIRFVNDLRLWILNPLGKGWLNALFPKPITP
                     REELEDALSHGGSAALFLKRPPGVFDAVATGRTNVRGRTEGDDLVRTLFGMQARTDRP
                     IFLVPQVFVWSRFPDTRGTEPFDFLLGPREWPSPARTIAQFFYNYRHVELKLGEPLDL
                     KAFLAGANGLTETTRVRRLTYAVLRRLERERRSVIGPAEKAPERVRQEIVRNPRLRAV
                     IDDLVDERNSRYALEIRAHEMLRELQATPERTTIKGLEVLFDRVFQRIYAGVEWEKSD
                     IDRLRHAAR"
BASE COUNT          345 a          834 c          787 g          346 t
ORIGIN      
        1 gcgctgagct cctcgtcctc gactttcgcc cgctgcacgg cgccgtcgag cccgacgcgc
       61 gcgagctcgg gtggcccgct ctcgacaccc ggtgccgcgt cgtcctcgcg ccacgtgagc
      121 gagagcgcgg catccggcaa aagggccgcc gaaaaaccga cgacgtgcgc gcgcggacca
      181 gagacggcgc gcgcgggcgc cgtgggtttg ccgttcgcgt cgagcgagag caccaagagc
      241 gcgcgcgggc ccacgtcgac gagccgttcg gggccgtccg ccgagccctg ctgcgcaccg
      301 gcgtcgtgcg tattcgcgtc gcgcgagttc gcgttgcggg taccggcatc gtgcgggacg
      361 gggtcgtgca cgccggcgtc cgggtgcgcg gcagacgctg cctgttcgga gacccacgcg
      421 agccagaacc caccggggcg cgcgacgagc acgggggatt cggcgtcgtc cgtgcctttg
      481 agctcgtcgc ccggcgccgt gccggagagc ttgtcgggtt tgacggcgag cgtcttcagc
      541 acggcgccgc gtttgccgcg cgcgccccaa acgagcagcg cgccgtgttc gcccacggca
      601 aaggctgcgc ccgtgtcgtg ctccacgccc gtgatcgaaa gctcgccgtg cggcttgtcc
      661 gcgtgcacgt cgaccgccga gatgcgcagc atgccgccgc cggcgtccat gtcggcgacg
      721 gccacgagca aggtgccgtc cgctcccgtg acgagcggcg ggtcgacgtc gccgtgcacg
      781 gcgccgagcc cgacgcgccg tccgggcgac ccgtcgagcg ggaccagcgc caagaacgct
      841 tcggtcttcg cgcgctgcgt gttcaggccg cccactgcaa aatcgttgcc gagcacgaac
      901 gccgaatcga cccgcgtcgc gaacggctgc agcgcctctt catcgtccgc atcgtccgtg
      961 tcgggctcgg cgcccggctc gcgggcgggc cgatccacct cacccacgac cagcgatgcg
     1021 cccgtgccga gcgcccggca acgttccggc gctgcggcca aaatcggcgc gctcgaggcc
     1081 gacgcgctcg gcgctgcggg cgcggcgttc ggcttcgcct tggctttgca gccgaaaatc
     1141 aagaggcccg cgccgagtcc cagagtgacc cggcggccga agggcgaagc ggcggacggc
     1201 atctgtccgg aggtaccgca cgctggcgga gccgcgcaag atggtaggct tccgccgacc
     1261 cgtccgcccc gaatcgcatc gaaatgtcag atcgcgagct tactcgcacg tacgaaccga
     1321 atccggtgct tcgcgccgtc taccggccct tcttcgacaa gatccaagtc gatgaagcgt
     1381 gggttgccgc ggtgcgcgat ctcgcggccc gcggctcggt cgtttacgtg ctccggaacc
     1441 tcaacttcat cgattttctg gcgctcgact acttgacgaa gcgctacggc ctgccgcgca
     1501 tccggttcgt caacgatctc aggctctgga tcctgaaccc gctcggcaag ggttggctga
     1561 acgcgctgtt tccgaaaccg atcacgccgc gtgaagagct cgaggacgcg ctgtcgcacg
     1621 gcggctcggc agcactcttc ttgaagcgcc cgcccggagt cttcgacgcc gtagcgaccg
     1681 gtcgcaccaa cgtgcgcggt cgcaccgaag gcgacgacct ggtgcgcacg ctcttcggca
     1741 tgcaggcgcg caccgaccgg ccgatcttcc tcgtgccgca agtgttcgtg tggtcgcgct
     1801 tccccgacac gcgcggcacc gagcctttcg atttcttgct ggggccgcgc gaatggccga
     1861 gcccggcgcg cacgatcgcg cagtttttct acaactaccg acacgtcgag ctgaagctcg
     1921 gcgagccgct cgacctcaag gcgttcctcg cgggcgccaa cggactcacc gagacgacgc
     1981 gcgtcaggcg cctcacctac gccgtcctgc gccggctcga gcgcgagcgc cgcagcgtga
     2041 tcggcccggc ggagaaggcg cccgagcgcg tgcggcagga gatcgtcaga aacccgcggc
     2101 tacgtgccgt gatcgacgat ctcgtcgacg agcgcaacag ccgttacgcc ctcgagatcc
     2161 gcgcgcacga gatgttgcgc gagctgcagg cgacgcccga acgcacgacg atcaaaggtc
     2221 tcgaggtgct gttcgaccgc gtcttccaac gcatctacgc gggcgtcgag tgggagaagt
     2281 cggacatcga tcgcctgcgc cacgcggcac gt
//
LOCUS       DATIML010000795         3767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3055616, whole genome shotgun sequence.
ACCESSION   DATIML010000795 DATIML010000000
VERSION     DATIML010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3767
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3055616"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..710
                     /locus_tag="VLJ38_13685"
     CDS             <1..710
                     /locus_tag="VLJ38_13685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40623.1"
                     /translation="RLPLVEFIQFPWRLLGPIALVSSMALAVASAALFERVHVALRFG
                     AALLVSIPLLVFIAWPHVGAGEMLTGNVPREPESVRAGLGSATDADEYLPLAVPAPPT
                     APRTALVASASGAAVEFESSDASRHAVIVRSERAGAEVTLALHAFPGWQLATAEGPAE
                     AKLSADARGLMLVTLPVAGHYRLELHFGASTAARVGYAITGLGVLLLLLLLVFPERDE
                     WRRRLRGIVSARSVPGV"
     gene            707..1555
                     /locus_tag="VLJ38_13690"
     CDS             707..1555
                     /locus_tag="VLJ38_13690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40624.1"
                     /translation="MTSNDHLSPARRAMGAAQALWRSGHLLECHAFMLSSLRATLDAW
                     LPADAPLEPEAREERALALLAEHEYPRIEALRGVLSAQRSPRDAPPSTAPGAALPPDF
                     ERSWLQAERLLKFSEVRLRPRADRRRRRVLLAGLLSASVIAVLFMAYRLWGRVRVEAS
                     AVYSAAIPASYAIDDLENTEWLLPDATLGWIDLQFPHARRLHDVVVLNGHNRAYLDRA
                     TRRFRLTAYDGHKVRATAEGEFPSLTAARSALDVKLQAKHVTRLRLEVLSYFGSGSAV
                     AEIQPH"
     gene            1642..2052
                     /locus_tag="VLJ38_13695"
     CDS             1642..2052
                     /locus_tag="VLJ38_13695"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSU40625.1"
                     /translation="MAVPSNMLPLGTPMPRFSLKDTVSGRLVASDELRGHPSVVAFIC
                     NHCPYVKHLRAGLADFGRYCQEKRVGFVAISSNDVAAYPDDAPDEMALEAKTHGYTFP
                     YLYDESQSVARAFDAACTPEFYVFDAHGKLAYRG"
     gene            2193..3245
                     /locus_tag="VLJ38_13700"
     CDS             2193..3245
                     /locus_tag="VLJ38_13700"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HSU40626.1"
                     /translation="MNETSGAALVLGAVALLLVALPLRGAEPAERPVAVVDLHVDLSY
                     QTNYEHRPFATGSGQFPAAELARAGVVGVVLPLFVPRDVSPTGPRVEDFESSYARVYG
                     ELARTPPFRLPGCLPGDGGVRTWFSFEGIGPLASTPEALVGWAARGLRVLAPVHTRQN
                     ELASSSGDRAPAPFGLTAAGKVFAHAAERAGIVLDVSHASDLAARDLLAVAAETRAPV
                     VATHSNARALANQPRNLADRELRAIAASDGVVGVNFHSPFVAAGHAATLADVVRQVRY
                     LTRVMGVAHVALGSDFEGDIRPPAELADVSGYQRLAAALARDGMARGDIAQIFSRNAL
                     RVLCRPSSGAGSGQGD"
     gene            3284..>3767
                     /locus_tag="VLJ38_13705"
     CDS             3284..>3767
                     /locus_tag="VLJ38_13705"
                     /inference="COORDINATES: protein motif:HMM:NF018508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HSU40627.1"
                     /translation="MTPADQSFLDAFPAWLKGLAADARKLAELVEHDGATESVRRAAA
                     SSLNYLFKSLDLIPDGLEDIGFLDDAFVFRVAAVRVPEGDVGEDPSGIITRLRAETTL
                     IQEFLGEVYPRLDAYVAELEKAKVRGRVVGEILSDSDVRAEFVREARAWADGYQPPSF
                     L"
BASE COUNT          509 a         1318 c         1270 g          670 t
ORIGIN      
        1 atcgcctgcc tttggtcgag ttcatccagt tcccgtggcg actgctcgga cctatcgcgc
       61 tggtttcgtc catggccctt gccgtcgcct cggccgcgct gttcgaacgg gtgcacgtag
      121 ctttgcgctt cggcgcggcg ctgctggtgt cgattccgct cttggtcttc atcgcttggc
      181 cgcacgtcgg cgcgggcgaa atgctcaccg ggaacgtgcc gcgtgagccg gagtcggtgc
      241 gcgccgggct cggctcggcg acggacgccg acgagtattt gccgcttgca gtgcccgcgc
      301 ctccgaccgc gccgcgaacg gctttggtcg cgagcgcgtc tggtgcagca gtcgagttcg
      361 agtcgagcga cgcgagccgc cacgccgtca tcgtacgttc cgagcgcgct ggcgccgaag
      421 tgacgctcgc gctgcacgcg ttccccggat ggcagctcgc gacggcagag gggccggcag
      481 aagcaaaact gtcggcggac gcgcgtggac tgatgctcgt gacgttaccg gtcgctggtc
      541 attatcgtct cgagcttcac ttcggcgcgt cgaccgcggc gcgcgtgggc tatgcgatta
      601 ccggcctcgg cgtgctgctg ttactcctgc tcttggtttt cccggagcga gacgagtggc
      661 ggcgcagact ccgaggtatc gtctcagcgc ggtcggtgcc gggcgtatga cctcgaatga
      721 ccacctgagc ccggcgcgac gcgccatggg cgctgcgcag gcgctctggc gcagcgggca
      781 cttgctcgaa tgccacgcgt tcatgctgag ttctctgcgt gcaacgctgg acgcgtggtt
      841 gccggcggac gcgccgctcg agccggaggc tcgtgaggaa agggcgctcg cgctgctcgc
      901 agagcacgaa tatccgcgca tcgaagcgct gcgcggcgtc ttgagcgcgc agcgctcgcc
      961 gcgcgacgcc ccgccgagca cggcacctgg cgccgcattg ccgccggatt tcgagcgcag
     1021 ctggctccaa gccgagcggc tgctcaagtt ttcggaagtc cgcctgcgcc cgcgtgccga
     1081 ccggcgtcgc cggcgcgtcc tcctcgctgg cttgctctcc gcgagcgtca tcgcggtcct
     1141 gttcatggct tatcgactgt ggggtcgcgt gcgggtggag gcgtccgccg tttacagcgc
     1201 tgccattccc gcctcctacg ccatcgatga cctcgaaaac accgagtggc tcttgccgga
     1261 tgcgacgctc ggctggatcg accttcagtt tccacacgcg cgccggcttc atgacgtcgt
     1321 cgtgctgaac ggtcacaacc gcgcctacct cgatcgcgcc acccggcgat ttcgcctgac
     1381 cgcctacgac ggccacaaag tccgcgccac ggcggagggc gagttcccgt cactgaccgc
     1441 tgctcgctcc gcgctcgacg tgaagcttca ggcgaaacac gtcacccggc tccggctcga
     1501 ggtgctctcg tacttcggct ccggttccgc ggtcgcggag attcagccgc actgacggca
     1561 tcgcttcgag cctacggagc tcgtgcgggc gagcgggacg ccacgccgcc ggcgcctggc
     1621 cgatgaggta acatctccgg catggccgtt ccctccaaca tgctgcccct cggcacgccg
     1681 atgccgcgct tcagcctcaa ggacaccgtc tcgggccggc tcgtcgcgtc ggacgagctc
     1741 cgcggacatc cgagcgtcgt cgcgttcatt tgcaatcact gcccgtacgt gaagcacttg
     1801 cgcgcggggc tcgctgattt tggccgctac tgccaggaaa agcgcgtcgg gttcgtagcc
     1861 attagctcga atgacgtcgc cgcctatccc gacgacgccc ccgacgagat ggccctcgaa
     1921 gccaagacgc acggctacac ctttccgtac ctttacgacg aatcgcagag cgtcgcgcgc
     1981 gccttcgacg ccgcgtgcac gcccgaattt tacgtgttcg acgcgcacgg caagctcgcc
     2041 tatcgcggct agttcgatga ggcacgcccc aaaaacagcg tgcccgtgac gggcgcggac
     2101 gtgcgtgccg ccgtcgaggc gctgctcgcc ggccgcgcgc cgggccccga tcagaagccg
     2161 tcgatcggct gcagcatcaa gtggaaagca ggttgaacga gacgagcggc gccgcgctcg
     2221 tgctcggcgc cgtggcgctg ctgctcgtcg ccttgccgct gcgcggcgcc gagcctgcgg
     2281 agcggcccgt tgccgtcgtc gatctgcacg tggatctttc gtaccagacg aactacgagc
     2341 accggccgtt cgcgacgggc agcggccaat ttccagccgc ggagctcgcg cgcgccggcg
     2401 tcgtcggcgt ggtgctgccg ctgttcgtgc cgcgcgacgt ttcgcccacg ggtccccgcg
     2461 tcgaggactt cgagagctct tacgcgcggg tgtacggcga gctcgcgcgc acgccgccct
     2521 ttcgcttgcc cggttgtttg cccggtgacg gcggcgtgcg cacgtggttc tcgttcgagg
     2581 gcatcgggcc gctcgcttcg acgccggagg cgctcgtcgg ctgggcggcg cgtgggctac
     2641 gcgtgctcgc gcccgtgcac acgcgtcaaa atgagctggc ttcgtcctcg ggggatcgcg
     2701 cgcccgcgcc gttcgggctg acggcggcgg gcaaagtctt tgcgcacgcg gcggagcgcg
     2761 ccggcatcgt gctcgacgtg tcgcacgcgt cggacctcgc ggcgcgcgat ctgctcgccg
     2821 tcgcagctga aacgcgcgcg cccgtggtcg ccacgcattc caacgcgcgc gctctcgcca
     2881 atcagccccg aaacctagcc gaccgcgagc tccgagcgat cgcggcatct gacggcgtgg
     2941 tgggcgtcaa ctttcactcg ccgttcgtcg ccgccggtca cgcggcgacg ctcgcggacg
     3001 tcgtgcgcca agtgcgttac ctcacgcgtg tcatgggcgt cgcgcacgtc gccctcggct
     3061 ccgatttcga aggtgacatt cggccgccgg ccgagctcgc ggacgtgagc ggctaccagc
     3121 gcctcgccgc tgcgctcgcg cgtgacggca tggcccgtgg cgacattgcg cagattttct
     3181 cgcgtaatgc gctgcgcgtg ctctgccgcc cgagctccgg agcgggctcg ggacagggcg
     3241 attgacgctc gccacggccg ataggaagac tcctggcacc cgcatgactc ctgccgacca
     3301 gagctttctc gacgcgtttc ccgcttggct caaggggctc gccgccgacg ctcgcaagct
     3361 cgccgagctc gtcgagcacg acggcgcaac cgagagcgtg cggcgcgccg cggcgagttc
     3421 gctcaattac ttgttcaaat cactcgatct aatccccgac ggcctggaag acatcggctt
     3481 cctcgacgac gcgttcgtct ttcgagtcgc cgcggttcgc gtgccggagg gcgatgtcgg
     3541 tgaggacccg agcggaatca tcacgcgcct gcgcgccgag acgacgctga tccaagaatt
     3601 tctgggcgag gtgtacccgc gcttggacgc gtacgtcgcc gagctggaga aagccaaagt
     3661 ccgtggtcgc gtcgtcgggg aaatcctgtc cgactcggac gtgcgggccg agttcgtgcg
     3721 cgaggcgcgc gcgtgggccg acggttatca gccgccgtcg tttcttc
//
LOCUS       DATIML010000796         1981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2764019, whole genome shotgun sequence.
ACCESSION   DATIML010000796 DATIML010000000
VERSION     DATIML010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2764019"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..1762)
                     /locus_tag="VLJ38_13710"
     CDS             complement(191..1762)
                     /locus_tag="VLJ38_13710"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU40628.1"
                     /translation="MSSLSLLAALTAGCASERPSEEGQVLVPVAQRDDATPVRRGTAQ
                     KTAVAPKTKPSSPRLYAKARFVWIQSKPDASAEWLGYLWTGGSVALKSERAHYGPGCD
                     GPWYEIEPRGFVCADDKRATIDGEDAEATALRAFTPNMASAWPFRYGESLGLVRYREL
                     PTPELQARNESDWGAHLADVLRARAGQDIEALRGVDVSLPELAPPPLPLLARTVHEAR
                     TELYQHSTVAYTTEARWGERAFLLSADYGWIPKDRVKEYAPLAFHGVHLGAEAKLPLA
                     FFRTHDRPKYARLGDRVTRATGVFARLSFVELTGKSVEQDGVRYLETREPGVLLDAAD
                     AVVPELPLTTPWGAPVDRTGHGQKPPRGSLKRQRATNGIRAEDEHARWIDVSIQGGWL
                     VAFEGTEPRYVTLISPGRGGTPVPHHRLLETASTPLGTFSINTKIVTATMEAPNELVH
                     SDVPWVQNFVGPYALHTAYWHDDWGDAVSGGCVNLSPVDARYLFDFTEPKLPPGWHAV
                     RRETRGPTTRVVLHP"
BASE COUNT          289 a          667 c          702 g          323 t
ORIGIN      
        1 gcgctcgatc cggtacttgc cgagcaggat ctgcccaggc acgacccccg cgacctgatg
       61 gccgggctct ggatcggtga cgctatggtt caaagggacg agcaccctgc caagtacgga
      121 tagggcagta tatcgatccc ccacccaagc gcccagccgg cacgaaaaac cgccgggcgt
      181 ccttgcgggc tcaggggtga agcacgacgc gcgtcgtcgg tccgcgcgtt tcgcgccgga
      241 cggcatgcca gccgggcggc agctttggct cagtgaaatc gaagagatag cgcgcgtcga
      301 cgggggacaa gttcacgcag ccgccgctca cggcgtcgcc ccagtcgtcg tgccagtacg
      361 cggtgtgcag cgcgtacggg ccgacgaaat tctgcaccca cggcacgtcg gagtgcacga
      421 gctcgttcgg ggcttccatc gtggcggtca cgatcttcgt gttgatcgag aacgtgccga
      481 ggggggtcga agccgtctcg agcagccggt gatgcggcac gggggttccg ccgcggccgg
      541 gcgagatgag cgtcacgtag cgcggctcgg tgccctcgaa ggcgacgagc caaccgccct
      601 gaatgctcac gtcgatccag cgagcgtgct cgtcttcggc gcggatgccg ttggtcgcgc
      661 gttgccgttt cagggagcca cgcggcggct tctgcccgtg cccggtccgg tcgacgggcg
      721 cgccccacgg cgtcgtcagg ggaagctcgg gcacgaccgc gtccgcggcg tcgagcaaga
      781 cgcccggctc gcgtgtttcg agatagcgca cgccgtcttg ctcgacgctc ttgcccgtga
      841 gctcgacgaa cgacagccgc gcgaacacgc cggtagcgcg cgtcacccga tcaccgaggc
      901 gcgcgtactt cgggcgatcg tgcgtgcgga agaaggcgag cggcagcttg gcttcggcgc
      961 cgaggtgcac gccgtggaac gcgagcggcg cgtattcctt cacgcgatct ttggggatcc
     1021 agccgtaatc ggcgctgagt agaaacgccc gctcgcccca gcgcgcctcg gtcgtgtagg
     1081 cgaccgtcga atgttgatag agctcggtgc gggcctcgtg caccgtgcgt gcgaggagcg
     1141 gcagcggcgg cggcgcgagc tcgggcagac tcacgtcgac gccgcgcagg gcttcgatgt
     1201 cttgccccgc acgcgccctg agtacgtctg cgaggtgcgc gccccaatcg gattcgttgc
     1261 gggcttggag ctcgggcgtg gggagctcgc gatagcgcac gaggcccagc gattcgccgt
     1321 agcggaaggg ccacgcggag gccatgttgg gcgtgaaggc gcgcagggcc gtggcctccg
     1381 cgtcttcgcc gtcgatggtc gcgcgcttgt cgtcggcgca cacgaagccg cgcggctcga
     1441 tttcgtacca ggggccgtcg caccccggcc cgtagtgggc tcgctcgctc ttcagcgcga
     1501 cggagccgcc cgtccacaga tagccgagcc actccgcgct ggcgtcgggt ttgctctgaa
     1561 tccagacgaa gcgtgccttc gcgtacagtc ggggagacga aggtttggtt ttaggggcga
     1621 ccgccgtctt ctgcgccgtt ccacgccgaa cgggcgtggc gtcgtcacgc tgcgccacgg
     1681 gcacgagcac ttgtccctct tcgctcggtc gctccgacgc acagccggcc gtcagcgccg
     1741 cgaggagcga gagtgagctc aacgagcgga gctgccgcgt gcttctcgcg gtgggcgcgc
     1801 gaacccgcat gacccccgag ggtactcgag cggaccgagc agctcaaagg ggttccagtt
     1861 cacctacact gtgcgcgcgc cccgggcccg agttcttgct cggatttcgc gatatcgtgc
     1921 gcgcgatgtt ttcccgaagc ttccgctccc ccgtcctcgc gctcggcgtc gccctgctcg
     1981 c
//
LOCUS       DATIML010000797         2095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1903400, whole genome shotgun sequence.
ACCESSION   DATIML010000797 DATIML010000000
VERSION     DATIML010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1903400"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..873)
                     /locus_tag="VLJ38_13715"
     CDS             complement(154..873)
                     /locus_tag="VLJ38_13715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40629.1"
                     /translation="MPFVSAFVLATTVGLAGAQGTPEQTHADSPRGGFVPSERVRDDW
                     MVSLEAVTRVPLEAGVQAGVEMPFGLRVFGGYGWVPAAYVNLVAGVAAGREQASVLLD
                     SAQYSGDSARFGLGIRPLRSFGGYFDASYAHVRLTATRDIPAFSVPGFTFPGGTYELR
                     TGLDLWAVELGYEAELARRFVLGGALGLTGAFQSNTVIRPRGSAPNEERALSEAAADV
                     DHVFRTNLLPTLTLRIGFDLI"
     gene            933..1820
                     /locus_tag="VLJ38_13720"
     CDS             933..1820
                     /locus_tag="VLJ38_13720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40630.1"
                     /translation="MAAISWESWRRRRWLPPLIALAALCLASVAVAFVTARGRRSPGR
                     LLDGIAATLSNIPHSPPKVSVAPEPATVAASAPTATPPSNQARNFIASAPSSATAPSS
                     VDATPDVERAPPAYPQPIVLHVEPPIDLDDAGTRAMESGGSSNDSTAAAAAVAASAAP
                     VASAAPAASAAPEGVACGTTQCAPGKVCCNASCGTCTDPGERCSQRVCGMNPFNESQS
                     CGPSTCNVGEVCCNPSCGTCVHPGDACDTTRRCSSEITFPDSQSCGMQTCNVGLVCCN
                     PSCGICAPPGEPCSQDACR"
BASE COUNT          325 a          706 c          742 g          322 t
ORIGIN      
        1 tcttcaaggc cgggatttgg gcgggcgtct tcgccgtcgt gtgcctcgcc gcggtgctcg
       61 cgctgctcgt gcgcacgctc ggcggctgaa gcgtaggcgc agcgctcgca ggcggcggca
      121 ggcttcgacg ccggcgctac gcgaggcgag tgttcaaatc agatcgaagc cgatgcgcag
      181 cgtgagcgtc gggagcaggt tggtccgaaa gacatgatcg acgtcggcgg ctgcttcgga
      241 cagcgctcgc tcctcgttgg gtgcgctgcc gcgcggacgg atcacggtgt tcgactgaaa
      301 cgcgccggtg aggccaagcg cgccgccgag cacgaaacgg cgggcgagct ccgcttcgta
      361 gccgagctcg acggcccaga gatccaagcc ggtgcgaagc tcgtaggtgc cgccggggaa
      421 cgtgaagcct ggcaccgaaa acgctgggat gtctcgcgtt gctgtcagtc gcacgtgagc
      481 gtagctcgcg tcgaagtagc cgccgaagct gcgcagcggt cggatgccca ggccgaagcg
      541 tgcgctgtca cccgagtact gtgccgaatc gagaaggacg ctcgcctgct cacgcccagc
      601 ggcgacgccg gcgacgaggt tcacgtacgc ggccggcacc cagccgtatc cgccgaaaac
      661 gcgcaggccg aacggcatct cgacgcctgc ctgcacgcct gcttcgagcg gcacgcgggt
      721 gacggcttcg agtgaaacca tccaatcgtc acgcacgcgc tcggacggca cgaagccgcc
      781 tcgcggcgag tcggcgtgcg tttgctcggg cgtgccctgt gcgcccgcga gaccgacggt
      841 cgtcgccagg acgaatgcgg atacgaacgg catggcacgc aaggaggcgc aagaacggtg
      901 ccactggtcc gccctttgca cgcttgcccc acatggccgc gatatcttgg gagagctggc
      961 ggcgccggcg ctggctaccg ccgctcatcg cgcttgcggc actgtgtctg gcgagcgtgg
     1021 ccgtggcatt cgtgactgcc cgcgggcgcc gttcaccagg ccgcctactc gacggcattg
     1081 cggcaacgct gtcgaatatt ccgcacagcc cgcccaaggt ctccgtcgca cccgaacccg
     1141 cgacggttgc ggcgagcgcg ccgacggcga cgccgccatc gaaccaagct cgtaacttca
     1201 tcgccagcgc gccgtcgagc gcgaccgccc cgagcagtgt cgatgcgaca ccggacgtcg
     1261 agcgcgctcc gccggcctac ccgcagccca tcgtgctcca cgtcgagcca cccatcgacc
     1321 tggacgacgc gggcacacgg gccatggaga gcggcgggtc aagcaatgat tcgacggccg
     1381 ccgccgctgc cgtggccgca tcggctgcgc ctgttgcatc agcggcgcct gctgcatcgg
     1441 cggcgccaga gggcgttgcc tgcggcacga cgcaatgtgc gcccggtaag gtttgctgca
     1501 acgcgagctg cggtacctgc accgaccccg gcgagcgctg ctcgcagcgc gtctgcggca
     1561 tgaatccttt caacgagagc caaagctgtg ggccgtcgac gtgcaacgtc ggcgaggttt
     1621 gctgtaaccc gagttgcggg acgtgcgttc atccgggcga tgcttgcgac acgactcgcc
     1681 gctgctcgag cgagattacc tttcccgaca gtcagtcgtg cggcatgcaa acgtgcaacg
     1741 tcgggctcgt ttgctgcaac ccgagctgcg gcatctgcgc gccgccgggc gagccgtgct
     1801 cacaagacgc gtgtcgctga gccccgtgtt actctgtccg tctcgtgcgc ggcgtcgagt
     1861 ggagcttcgt ggtcgtctgt tcgttcgcgt gcgcttgttc gagcacggac gctgagcgcg
     1921 gagcgcctgc cgacaccgcg ggtcgaagcg ttggcggcgg gagcggccaa gcgccgacca
     1981 gctcgagcgg tggcgttggg cagttgggcg ctggccaaag cggtgccgcg caatcgcacg
     2041 ctgggcagag cggcggtcac ggggccggca caggtgggag cggtgggcac gcacc
//
LOCUS       DATIML010000798         2105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5079965, whole genome shotgun sequence.
ACCESSION   DATIML010000798 DATIML010000000
VERSION     DATIML010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5079965"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            616..903
                     /locus_tag="VLJ38_13725"
     CDS             616..903
                     /locus_tag="VLJ38_13725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40631.1"
                     /translation="MDSEHSIGRRARDPSDVAEFAQLPIGHVEVGVMRARCSPSDCDA
                     DEARASLRLAAGALGASELVGVRCVSFDGERACIATLGVAERDPETDPLAR"
     gene            complement(906..1628)
                     /locus_tag="VLJ38_13730"
     CDS             complement(906..1628)
                     /locus_tag="VLJ38_13730"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU40632.1"
                     /translation="MTAEDDRARTYYDDFSKRYENQRHHGYHALLDELELAVALPLAG
                     GRDVLEVGCGTGLILERLARVARRAEGIDLSPGMLEKARARGLSVREASATALPYADA
                     EFDLVVSFKVLAHVPDIASALAEMARVCRPGGRVLAELYNPWSLRFLAKRLGGPGTIS
                     ENRSEADVFTRWDPPSRLRQLMPPALELTEVRGLRVFTPAAFVHRLPFVGAALARAER
                     LVTRSPLRWFGGFLVVIATKRD"
     gene            complement(1625..>2105)
                     /locus_tag="VLJ38_13735"
     CDS             complement(1625..>2105)
                     /locus_tag="VLJ38_13735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU40633.1"
                     /translation="LAREVELALACRVKTPRARAVEAELQERARALGTADRVHFVGET
                     PKIIELVAAADIVTLPSTVAYAKMDYPLVLLEAMALARPVVVATDTPAAELAEDGAAL
                     AVTPDETTLGEVFGRLFEDEAERAALGRAARAAARERFGRERMAEAYELLYDGLLAG"
BASE COUNT          321 a          697 c          763 g          324 t
ORIGIN      
        1 cagcggtgga gcgcctagct ccaacgacgg cacgggcgcc tgagtccgat aaactgagtg
       61 gcgagtcgct cgagcggctc gccgcgcagg ccaagtctga aaaggcgcga cgacggtcgc
      121 gccttttctt tatttgggct accgctgaag cgagcgatga agcgactcga gctgctgcgg
      181 aaagcaaact ggcgccgcgt cggcgcgtgc ttgggtgcgc tcgcgggact cggatgcacg
      241 agcgccgccc cgcgtcctcc gcatgctccg gtcgagctca gcgaaacgtt gccggccggc
      301 tatgactctc tcggcatggt gagcgccgct tgccgggtgc ggccgcggga gcgttcgttc
      361 cgaggcgagc ctgcaacgag ctttgcctgt agtcgaaacg agctcgtgcg cgcgctcgtc
      421 gaaagagcca atgcgcgcgg ggccaatttg ctcgcacgcg aaagctgcga gcgcgagggc
      481 gaagacgccc tcgtttgcac ggccgaggcc gcgcgccctc ggtcagctgc gccagagaaa
      541 gcgcagccat cggctcaatc cgccgaccgc gacgacgagc ttctcgtcag cgtggcgact
      601 cgtattcgga tcgacgtgga ttccgagcac tccattggcc gccgagcacg ggacccgagc
      661 gacgtggcgg agttcgctca gttgccgatc ggtcatgtcg aggtcggcgt catgcgcgcc
      721 cgttgctcgc cgtcggactg cgacgcggac gaggcgcgcg ccagtctccg gctcgccgcc
      781 ggcgcgctcg gcgcgtccga gctcgtcggc gtgcggtgcg tttcgttcga cggcgagcgt
      841 gcgtgcatcg caaccctcgg cgtggcggag cgcgatccgg agacggatcc gctcgcgcgc
      901 tgagctcagt cgcgcttggt cgcgatcacg acgagaaatc cgccgaacca gcgcaggggg
      961 ctgcgagtca cgagacgttc ggctcgcgcg agcgccgcgc cgacgaacgg cagtcgatgc
     1021 acgaacgccg cgggcgtgaa gacgcgcagc ccccgaacct ccgtcagttc gagtgcgggc
     1081 ggcatcagct gccgcagccg tgacggcggg tcccagcggg tgaatacgtc cgcttcggag
     1141 cggttttcgg agatggtgcc cgggcccccc aggcgttttg ccaagaaccg caggctccag
     1201 gggttgtaga gctcggcgag cacgcgcccg cccgggcgac aaacgcgggc catctcggcg
     1261 agcgccgacg cgatgtcggg tacgtgggcg agcactttga agctgaccac caggtcgaat
     1321 tcggcgtcgg cgtaggggag ggccgtcgcg ctcgcttcac gcacactgag gccgcgggca
     1381 cgcgcctttt cgagcatgcc gggcgagaga tcgatgcctt cggcgcggcg ggcgacgcgg
     1441 gcgagccgct cgaggatcag accggtgccg caaccgacct cgagcacgtc ccgaccgccc
     1501 gcgaggggta gcgcgacagc aagctcgagc tcgtcgagga gcgcgtgata gccgtggtgg
     1561 cgctggtttt cgtaacgctt cgaaaagtcg tcgtagtagg tacgggcgcg gtcatcttcg
     1621 gcagtcatcc ggcgaggagc ccatcgtaga ggagctcgta ggcttcggcc atgcgttcgc
     1681 ggccgaaacg ttcgcgagcg gctgcgcgcg ccgcgcggcc gagcgctgct cgctcggctt
     1741 cgtcctcgaa caaacggccg aagacctcgc cgagcgtcgt ctcatcgggt gttacggcga
     1801 gcgccgctcc gtcttcggcg agctctgccg cgggcgtgtc cgtcgcgacg accacgggcc
     1861 gggcgagcgc catcgcttcg agcagcacga gcgggtagtc catcttcgcg tacgcgacgg
     1921 tcgagggcag ggtcacgatg tcggctgcgg cgacgagctc gatgattttc ggcgtttcac
     1981 cgacgaagtg aacgcgatcg gcggtcccga gcgcccgggc gcgttcttgc agctcggcct
     2041 cgaccgcgcg cgcccgcggc gtcttcacgc ggcaagccag agcgagctcg acttcgcgcg
     2101 cgagc
//
LOCUS       DATIML010000799         2806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3918178, whole genome shotgun sequence.
ACCESSION   DATIML010000799 DATIML010000000
VERSION     DATIML010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3918178"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VLJ38_13740"
     CDS             <1..603
                     /locus_tag="VLJ38_13740"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU40634.1"
                     /translation="ATGAPLAKNAEPDESLLDRQPPPAPVSNRADVALLERRRDAAAA
                     AANAHGHPFAPVLGVGLDAGLKGQGYTPFPLYDVGLTLSVPLLDGGLESANAAQATSQ
                     ANDFAAQAREAKRKVTIQEQRSRLALERASRRLELAQALVAAADEQVKHAEDQHELGG
                     VTFDAVVQARMQAERARLEVLTARLEHARAVLDLSSANTR"
     gene            complement(640..2745)
                     /locus_tag="VLJ38_13745"
     CDS             complement(640..2745)
                     /locus_tag="VLJ38_13745"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HSU40635.1"
                     /translation="MSARKNQPKKRTKAKARRVQRRQGGGRNKPARRSPRPAAKPKSK
                     STARKPVKAAAAQKQAAAKKAKAKKLADKKAAEKKLASKKAAEKKLADKKAAEKKLAE
                     QARREREREKIVRAKEKERELKERERQKALKEKEKQREHALKEREREKALKEKEREKA
                     QREKEKERELKEREREQALKEKERLKLLAEKEAERARAKKDADERRARDKAEKEAERK
                     RIAADKEAERKRQIAEREAAKEAARKAKEEERARREAEREAYRKAKDAERERLRAERE
                     AARRVREAKVARATRAAQKMDGLRMGTTRAYDPAAIPNQSGTTRHTGASGLIVHRLVG
                     VRHADSSPRHAVPTPLPIEPRRPTPPPAPPPVPVSESIEERYRRILERLGTAPESLKK
                     EYEETLEMSWIHHDSALEGVVYTFQELQAAMDPSASATPDSSMQPVCEEIRRHRQAIA
                     YVRDLGERKRVPLNVDVVKRIYVILHPEEGDVKTVKYRKDIPQHRLYFHEYAAPDKIA
                     YRVRQIMDWLNGPEAKKMKSPLRVAARVHYDLLRVFPFPLDSGKVSRLLMNIVLLRGG
                     YPPAIVHSTERQRYYEALKGQLPVIISLVNESIMNALASIEKRLDDEARAGGAPAPSS
                     SNAQSGPPSSPPEHEASTLPPAESEPFDAATDDAPSDDADADSDDSDELPPESEPAPE
                     SEPTGSSPSEPPPSSPSAS"
BASE COUNT          348 a          948 c          932 g          578 t
ORIGIN      
        1 gcgacgggcg cgccgctcgc caaaaacgcc gagccggacg agtcgctgct cgatcgccaa
       61 ccgccgcccg caccggtgtc gaatcgtgcg gacgtcgccc tgctcgagcg ccgccgcgac
      121 gccgcggcag cggccgcgaa cgctcatggc caccccttcg cgcccgtgct cggcgtcggt
      181 ctcgacgcgg gcctcaaggg acagggctat acgccctttc cgctctacga cgtgggtctc
      241 acgctcagcg tgccgctgct cgacggcggt ctcgaatcgg cgaacgccgc gcaggcgacg
      301 tcacaggcca acgatttcgc cgcgcaagcg cgtgaagcca aacgcaaggt gacgatccaa
      361 gagcaacgtt cccgcctggc gctcgaacgc gcgtcgcgcc ggctcgagct cgctcaggcg
      421 ctcgtcgccg cggccgacga acaggtcaaa cacgccgaag accaacacga gctcggcggc
      481 gtcacgttcg acgccgtcgt gcaggcgcgc atgcaagccg agcgcgcgcg gctcgaagtg
      541 ctgaccgcgc gtctcgagca cgcccgcgcc gtgctcgacc tgagctccgc gaacacgcgc
      601 tgacataggc gcgtcacggc ggcacgcccg cgcccgcgct caggatgccg aaggagagga
      661 cggaggcggc tccgacgggg aggacccagt cggctctgat tccggtgctg gctcggactc
      721 tggcggcagc tcatccgaat cgtccgagtc cgcgtcggcg tcatccgagg gtgcgtcgtc
      781 ggtcgccgcg tcgaacggct ccgattcagc cggcggcagc gtcgaagcct cgtgttccgg
      841 cggcgaggat ggcggcccgg actgggcatt cgaggatgac ggcgccggag caccgcccgc
      901 gcgcgcctcg tcgtcgaggc gcttctcgat gctcgcgagc gcgttcatga tcgactcgtt
      961 cacgagcgat atgatgaccg gcagctggcc cttgagcgcc tcgtagtagc gctgccgctc
     1021 cgtcgagtgc acgatcgccg gcggataccc gccgcgcaag agcacgatgt tcatgagcag
     1081 gcgcgacact ttcccgctgt cgagcgggaa ggggaacacg cgcaagagat cgtagtgcac
     1141 gcgcgccgcg acgcggagcg ggctcttcat cttcttggct tcgggcccgt tgagccaatc
     1201 catgatctgc cgcacgcgat aggcgatttt atcgggggcg gcgtactcgt ggaagtaaag
     1261 gcggtgctgc ggaatgtcct tccggtactt caccgtcttc acgtcgcctt cttcgggatg
     1321 aaggatgacg tagatgcgct tgacgacgtc gacgttgagc gggacgcgct tgcgctcgcc
     1381 gagatcgcgc acgtacgcga ttgcttggcg atggcggcgg atctcctcgc acacgggctg
     1441 catgctcgaa tccggggtcg cgctcgcgct cggatccatg gcggcctgga gctcctggaa
     1501 cgtgtagacg acgccttcga gcgcgctgtc gtgatggatc cacgacatct cgagcgtctc
     1561 ttcgtattcc ttcttcagcg actcgggcgc cgtgccgagc cgttcgagga tgcgccggta
     1621 gcgttcctcg atgctttcgc tgacgggcac gggcggcggg gcggggggcg gcgtcggacg
     1681 tcggggttcg atgggtagcg gtgtcggcac cgcgtggcgt ggcgacgagt ccgcgtgtcg
     1741 gaccccgacc agccgatgga cgatgagtcc gctcgcaccg gtgtggcgcg tggtgcccga
     1801 ttggttcggg atggccgccg gatcgtaggc gcgcgtcgtg cccatcctga ggccgtccat
     1861 cttttgcgcg gcgcgggtgg cccgcgcgac cttggcctca cggacgcgac gggcggcttc
     1921 gcgctcggca cgtagccgtt cgcgttccgc gtccttcgcc ttgcgatacg cctcacgctc
     1981 ggcttcgcgg cgcgcgcgct cctcttcctt cgccttgcgg gcggcttcct tggcggcctc
     2041 gcgctcggcg atttggcgct tgcgttcggc ttccttgtcc gccgcgatac gcttgcgttc
     2101 ggcttctttt tccgctttgt cgcgggctcg ccgctcgtcg gcgtctttct tggctcgcgc
     2161 gcgctcggct tctttttccg ccaggagctt caggcgctcc ttctctttga gagcctgctc
     2221 gcgctcgcgc tccttgagct cgcgctcctt ctctttttcg cgctgagctt tctcgcgctc
     2281 cttctctttg agcgcttttt cgcgttcgcg ttccttcaac gcatgctcgc gctgcttttc
     2341 cttctctttg agcgcctttt ggcgttcgcg ctctttgagc tcgcgctcct tctctttcgc
     2401 gcgaacgatc ttctcgcgct ctcgctcgcg gcgagcttgt tcggcgagct tcttttcagc
     2461 agccttcttg tcggcgagct tcttttcagc agccttcttg ctggcgagct tcttttcagc
     2521 agccttcttg tcggcgagct tcttcgcctt ggctttcttt gccgctgcct gcttttgagc
     2581 ggcggctgcc ttgacgggtt tgcgggcggt ggacttggac tttggcttgg cggccggccg
     2641 aggggagcga cgggctggct tgttgcgccc gcctccctgt cggcgctgga cgcgcctagc
     2701 cttggccttc gtgcgcttct tcggctgatt cttgcgagct gacattgaac gcgacagacg
     2761 cgacccaggg ccgagggcag cgccccaaaa aagatctgta aatttc
//
LOCUS       DATIML010000800        10068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5080933, whole genome shotgun sequence.
ACCESSION   DATIML010000800 DATIML010000000
VERSION     DATIML010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10068
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5080933"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..589
                     /locus_tag="VLJ38_13750"
     CDS             <1..589
                     /locus_tag="VLJ38_13750"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HSU40636.1"
                     /translation="TAAVQTYVPEIARGLGITMSHFFTNTKEMVLGQRPDPSTESVEA
                     GINTVSYPEQKRPYPARFRGVHRLTHREDDSPRCVACLCCSTACPAQCIHIEAGEYPE
                     GDPRRGYERFPKRFVIDELRCIFCGYCVEACPCDAIRMDTGIHAAPYDSREQFIFEKD
                     LLMSFAGRDGSQLSQNPRHEPADPTYPGVTREKGH"
     gene            850..2274
                     /gene="gatB"
                     /locus_tag="VLJ38_13755"
     CDS             850..2274
                     /gene="gatB"
                     /locus_tag="VLJ38_13755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HSU40637.1"
                     /translation="MTDYEPVIGLEVHAQLLTRTKLFCGCSTNFGGHPNTNVCPVCLG
                     LPGSLPVLNGAAVAMAVRAAVALGCSIEAKSIFARKNYFYPDLPKGYQISQYEEPFSR
                     HGSLELEVDGVRKKVGITRVHMEEDAGKNVHGVGGDSLVDLNRAGVPLVEIVGEPDLR
                     SSAEAAAYLRALRDVLVFIGVNDGNLEEGSFRCDANVSLRPRGTEKFGTRCEIKNINS
                     FRFVQRAIDAEIARQTAILDAGGKITQETRSFDPDTNQTKTLRSKEDAHDYRYFPEPD
                     LPPLALDAAFVSAQKSALPELPAAMRRRFVEELKLPPAAALTLTGHPAYARFFADACA
                     GFGDPIKVANWVVNEVLRGAKSHGLDATFSVTPAQVSELLALVEAGDISGKQAKEVYA
                     AIEGSDRSPRALIDERGMRVVSDAGAIQAVCERVLAAHPDQVASIRAGKKGVLGFLVG
                     QVMKETRGSANPKLVSSVLEKLTS"
     gene            complement(2329..2802)
                     /locus_tag="VLJ38_13760"
     CDS             complement(2329..2802)
                     /locus_tag="VLJ38_13760"
                     /inference="COORDINATES: protein motif:HMM:NF020950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease inhibitor I42 family protein"
                     /protein_id="HSU40638.1"
                     /translation="MFGFAATLALACKTSPETAPPGASAPTAATSLPSPPTGATTAPG
                     ATTPVPRTYDAATTSIEAGVGDAFNVALPSNITVPMKWRVEPQPDPKILAGGDDKYVE
                     QPPAECPGCAGYGGTRLFPFVATAPGSVTLHFALRPLSDPKGAAQKEVTIKVTIK"
     gene            complement(2817..5072)
                     /locus_tag="VLJ38_13765"
     CDS             complement(2817..5072)
                     /locus_tag="VLJ38_13765"
                     /inference="COORDINATES: protein motif:HMM:NF012340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C1 family peptidase"
                     /protein_id="HSU40639.1"
                     /translation="MALTLLAAGAASVAVPAGALPPKPPISVPPKPALHAAGTSTPAP
                     PAAPVTSAAGGHFTQHLQQLTALVQKDVERQARGNPLAKPRRKKSLAELRRGGLEQPK
                     PFARPAQRRSNLRSPQKRGVTQPLVTEKMAALTARVRRYVELETKASTTVKTKVAALR
                     TSIAQQKRSFQVGVTSVSDRPLKEITGFIGKPDLRAAKAQKAKRDSRKGKPNLVRETM
                     RERATPPPSAPDKKNEHRDPDDRPVTASKLIVTPDETRGSKGAGFPSSAMPSPTNPQF
                     SWRDKLEAVRNQGYCGSCWAFAVVGAYEGSQSLQNSQALDMAEQQLVNCVAPNPMTGG
                     DNCQGNMPATALDWMVANGTPYEQALPYKASMASCNTGVDRSDTRAAGWGFVSEDDPE
                     SIPSDALIKQAIAVHGPVAATVYVTDAFQSYTSGVFDEGASGHPNHAIDIVGWDDARK
                     AWHVRNSWGTSWGEDGYIWVKYGSNSIGYLASWVDAEKVTKPAPAEATFKDRYVSLRN
                     DAGEDLDISVQALVPSGSSFKWVPGEAGGAEAWKFRVGPATVLDVKRPDDGKFLRAKA
                     LRVWATSTDGKRSWNQYKAKDLAVASKSYRAAKRDRFTEDFPKSGGEPDADDVFTSAM
                     ELKDDKKLADARDQFALFAELFPDDARVHEARFWDGWCENQLGEYWEAVQDLYAMISG
                     APDEDENVPYAFYYLGDSYSSVGYCGYAVRSLEVDAYGEVNAPKNWVDASKKMIKFLN
                     DDDGQVCQNWD"
     gene            5155..6189
                     /gene="lipA"
                     /locus_tag="VLJ38_13770"
     CDS             5155..6189
                     /gene="lipA"
                     /locus_tag="VLJ38_13770"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HSU40640.1"
                     /translation="MLTAEDPKGGSPPLPHKEPKPPWLKVRAPGGETYAKLKQTLRSL
                     DLYTVCEEARCPNVGECWTAGTATIMLLGHTCTRGCRFCAVTTGNPRGAYDPREPEHV
                     ARAIATLDLKYVVLTMVDRDDLIDGGALQVARTVDGLRERRPELLVETLVGDFRGRLG
                     DVDVVLRSAPAVFAHNVEVTRRLTPLIRDARCDYDLSLGVLRHAKERAPERFVKSSIM
                     LGLGESRDEVDETLADLRAAGVDIVTLGQYLRPTPKHAKVDRYVTPEEFADYEARAYA
                     LGFAFVASGPLVRSSYHAAEGFVAARLNPASASGLAPRPVASKPPEPGVPAGGLLSPS
                     ALVRRSPSPR"
     gene            6367..6897
                     /locus_tag="VLJ38_13775"
     CDS             6367..6897
                     /locus_tag="VLJ38_13775"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HSU40641.1"
                     /translation="MSQLSRPPNYADRGVKDSILVASAASYGRSSEDDLTQPTGFDPE
                     AARLFEAIVESAFLVATADGEFDGTEQAAFQHVVLEACGGRVAERQIAALLGDLHDQV
                     AEDGVDKRIQMVARSIAREDHGREVLRVAALLAYVSGGVSDIERSMLDRLALALGLNA
                     QATSTALSEVASALSD"
     gene            7043..8170
                     /gene="pdhA"
                     /locus_tag="VLJ38_13780"
     CDS             7043..8170
                     /gene="pdhA"
                     /locus_tag="VLJ38_13780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HSU40642.1"
                     /translation="MSSEQSRRSGSSDPSAIVSVLRDDGTLDPAHDPGLGDDEVKFLY
                     RHLVQTRQLDERFVALQRQGRIGFHVGSLGEEAAILGSAFAMRKQDWLFPCYREFGAA
                     LMRGLSLQKLCDNMFGNANDTVKGRQMPCHYTCKAVGWTSISSPVGTQITHAVGAAWA
                     AKIRHEDAASLVYFGDGATSSSDFHSGLNFAGVFHLPVVFLCRNNGWAISVPVERQTA
                     TQTFAEKAVAYGIPGVRVDGNDIFAVVSVTRRAIERGMRGEGPTLVEAITYRMGGHST
                     SDDPNRYRESEAVQAWAARDPIERVRSYLVQRGAWSEADDKTLRADIDARFREAVAVA
                     EKTPPPALESMFDDVYAKVPWHLAEQRAELVAGPRAPSPHG"
     gene            8176..9150
                     /locus_tag="VLJ38_13785"
     CDS             8176..9150
                     /locus_tag="VLJ38_13785"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HSU40643.1"
                     /translation="MASINMVQAINDALRVAMRSDQRVVVLGEDVGKVGGVFRVTAGL
                     QDEFGEERVIDTPLSENGIVGSAVGMALYGIVPVVEIQFADFIWPAYDQIVNELAKYR
                     YRSGGEYSAKIVIRTPVGGGIRGGHYHSQHPEAQFIGVPGLKVVIPSNPYDAKGLLLA
                     SIRDPDPVIFFEPKRVYRAAKGEVPDGDYTVPLETASVVRPGRHVTVLAYGAMLYEAL
                     DAATKAAEKGVDAEVIDLRTLWPLDINTVIDSVKRTGRLVVVHEAPRTAGFGAELVTL
                     VCERALYHLEAAPVRVTGFDTPFPYTLEMEYLPLSHRILPAILSVVRS"
     gene            9520..>10068
                     /locus_tag="VLJ38_13790"
     CDS             9520..>10068
                     /locus_tag="VLJ38_13790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HSU40644.1"
                     /translation="MSKLEFKLPDIGEGVAEGEIVNWLVQEGDAVAENQEMVEVMTDK
                     ATVTIGAPKAGKVAERRFKVGDTVPVGGVLVVLDLEGGGAPEAPAPAPAATPAAKPAP
                     APAAKSDAQSSGPVASAVGDIRENLPGMNAAPAPRANDYFTDKPLAAPATRKLARELG
                     VDLRQVAPSGSSGRVTREDVERH"
BASE COUNT         1604 a         3403 c         3342 g         1719 t
ORIGIN      
        1 cacggccgcg gtccaaacct acgtgcccga aatcgcgcgc ggcctcggga ttaccatgag
       61 ccacttcttc acgaacacga aggagatggt gctcggtcag cgtcccgatc cttcgaccga
      121 gtcggtcgaa gcgggcatca acaccgtctc gtacccggag cagaagcgac cgtaccccgc
      181 gcgcttccgc ggcgtgcacc gcctgaccca tcgcgaggac gactctccgc gttgcgtcgc
      241 ttgcctctgc tgctcgacgg cgtgccccgc tcagtgcatc cacatcgagg ctggtgagta
      301 cccggaaggc gatccgcgcc gcgggtacga acgcttcccc aagcgcttcg tgatcgacga
      361 gctccgctgc atcttctgcg gctactgcgt cgaggcctgc ccttgcgacg ccattcgcat
      421 ggataccggc attcacgccg ctccctacga ttcgcgcgag cagttcatct tcgaaaaaga
      481 cctgctcatg agcttcgccg gtcgcgacgg ttcacagctc tcgcagaacc cgcgtcacga
      541 gcccgccgac ccgacctatc cgggcgtcac gcgcgaaaaa ggtcactgac gccgcgtcac
      601 ggaaacggcg gtagcggcgc ggacatgcgc gcggatgcgc tcgcgtgcgc gagatcatac
      661 tccttgatcg cttgagtgca tcgaggttcg gtgctcgcgc gcgtgcagta aacgacgctg
      721 accgggtggg catgattggc tccttcctcc gtcacatcgg ccaggcctcg tggccagttg
      781 cgcggcgagc cgctgattcc cgcgaaccgc ccgatgggcc gtgcgcttca cgcgtgatat
      841 agcggcccga tgaccgacta cgagccagtc atcgggcttg aggttcacgc gcagctgctc
      901 acccgcacga agctcttctg cggctgttcg acgaacttcg gtgggcaccc gaacaccaac
      961 gtgtgcccgg tgtgcctcgg tctacccggc tcgctgccgg tcttgaacgg cgctgccgtc
     1021 gccatggcgg tgcgcgccgc ggtcgcgctc ggctgcagca tcgaggcgaa gagcatcttc
     1081 gcgcgcaaga actactttta tccggatctg ccgaagggct accaaatcag ccaatacgaa
     1141 gagccgttct cgcgccacgg cagcctcgag ctcgaggtcg atggtgttcg gaagaaagtc
     1201 gggatcacgc gcgtgcacat ggaggaagac gctggcaaaa acgtgcacgg cgtcgggggg
     1261 gactcgctcg tcgacttgaa ccgcgccggc gttccgctcg tcgagatcgt cggcgaaccg
     1321 gacttgcgct cgagcgccga agcggccgca tacctgcgcg cgctgcgcga cgtgctcgtg
     1381 ttcatcggcg tcaacgacgg caacctcgaa gagggcagct tccgctgcga cgccaacgtc
     1441 tcgctgcgcc cgcgcggcac cgagaaattc ggcacgcgct gcgagatcaa gaatatcaac
     1501 tcgtttcgct tcgtgcagcg cgccatcgac gccgaaatag cgcgtcagac cgcgatcctc
     1561 gacgcaggcg gcaagatcac gcaagaaacc cgtagcttcg accccgatac gaaccaaacc
     1621 aagacgctgc gctcgaagga agacgcgcac gactatcgct acttccccga gccggacttg
     1681 ccgccgctcg cgctcgacgc agcgttcgtc agcgcgcaaa agagcgcgct gcccgagctg
     1741 cccgccgcga tgcgccgccg cttcgtcgag gagctcaagt tgcctcccgc cgccgcgctc
     1801 acgctcacgg gacacccggc ttacgcgcgc ttcttcgccg acgcgtgtgc gggcttcggc
     1861 gatccgatca aggttgcgaa ttgggtcgtg aacgaggtgc tgcggggcgc caaatcacat
     1921 ggtctcgacg cgacgttcag cgtgacgccc gcgcaagtct ccgagttgct cgcgctcgtc
     1981 gaagccggcg acatcagcgg caagcaggcg aaggaagtgt acgcggccat cgaaggcagc
     2041 gaccgctcac cccgcgccct catcgatgag cggggcatgc gcgtcgtctc cgacgccggt
     2101 gcgatccagg ccgtgtgcga gcgtgtgctg gcggcccatc ccgatcaggt agcgagcatt
     2161 cgagccggca aaaagggcgt gctcggcttc ctcgtcgggc aggtcatgaa ggagacccgt
     2221 ggctcggcga atccgaagct cgtgagctcc gtgctcgaga agctcacgag ctgagcgcgc
     2281 cgctcgtcgt gtgcgtgcgc gctgaccggc cgtcgtgccg tcgcggcgtt acttgatcgt
     2341 gaccttgatg gtcacttcct tttgtgcggc gcccttcgga tcggacagcg gccgcagcgc
     2401 gaaatggagc gtgacgctgc cgggcgcggt cgccacgaac ggaaacaggc gcgtgccgcc
     2461 gtaccccgcg cagccggggc actccgccgg cggctgttcg acgtacttgt cgtcgccgcc
     2521 ggccagaatc ttcggatccg gctgcggttc gacgcgccac ttcatgggta cggtgatgtt
     2581 ggacggcagc gcgacgttga acgcgtcgcc cacgccggcc tcgatgctcg tcgtggcagc
     2641 gtcgtaggtg cgtggcacgg gcgtcgtcgc cccgggcgcc gtcgttgcgc cggtcggcgg
     2701 tgaggggagg ctggtcgccg ccgtgggtgc gctcgcaccg ggcggcgccg tctccggcga
     2761 cgtcttgcaa gcgagcgcca gcgtcgcagc gaatccgaac acgaaacccc gcgtgtctaa
     2821 tcccagtttt gacatacttg cccatcgtcg tcgttgagga acttgatcat cttcttcgag
     2881 gcatcgaccc agtttttcgg cgcgttgacc tcgccgtagg catcgacctc gagcgagcgc
     2941 acggcgtagc cgcaatagcc gaccgacgaa tacgagtcgc cgaggtagta gaaggcgtaa
     3001 ggcacgttct catcctcgtc gggcgcgccc gagatcatgg cgtagagatc ctggacggcc
     3061 tcccagtact cgccgagctg gttttcacac cagccgtccc agaaacgcgc ctcgtgcacg
     3121 cgcgcatcgt cgggaaagag ctcggcgaag agcgcgaatt ggtcgcgcgc gtcggcgagc
     3181 ttcttgtcgt ccttgagctc catggcgctc gtgaacacgt cgtcggcgtc gggctcgccg
     3241 ccggatttcg ggaaatcctc ggtgaagcgg tcgcgcttgg cggcgcgata ggacttgctc
     3301 gccacggcga gatccttcgc cttgtactgg ttccagctgc gcttgccgtc cgtggacgta
     3361 gcccacacgc ggagcgcctt cgcccgcagg aatttgccgt cgtcggggcg tttcacgtcg
     3421 agcacggtcg cgggtcccac ccggaacttc cacgcctcgg cgccgccagc ttcgcccggc
     3481 acccacttga acgagctccc cgagggcacg agcgcctgca ccgagatgtc gaggtcttcg
     3541 cccgcgtcgt tgcgcaggct cacgtagcga tccttgaacg tcgcctctgc gggagcgggc
     3601 ttggtcacct tttcggcgtc gacccagctc gcgaggtagc cgatcgaatt cgagccgtac
     3661 ttcacccaga tgtagccgtc ctcgccccac gacgtgcccc acgaatttct cacgtgccag
     3721 gctttgcgcg cgtcgtccca gccgacgatg tcgatcgcgt ggttcgggtg cccgctcgcg
     3781 ccttcgtcga acacgccgct cgtgtagctc tggaaagcgt cggtgacgta gaccgtggcg
     3841 gcgaccggcc cgtgcacggc gatggcctgc ttgatgagcg cgtcgctcgg gatgctctcg
     3901 gggtcgtctt cgctcacgaa gccccagccg gcggcacgcg tgtcgctgcg atcgacgccc
     3961 gtgttgcagc tcgccatcga ggccttgtac ggcagcgcct gctcgtaagg cgtcccgttc
     4021 gccaccatcc agtcgagcgc cgtggccggc atgttgccct ggcaattgtc gccgcccgtc
     4081 atggggttcg gggccacgca gttgacgagc tgctgctcgg ccatgtcgag cgcttggcta
     4141 ttttgcagcg actggctgcc ctcgtaggcg ccgacgacgg cgaacgccca gcagctcccg
     4201 cagtagccct gatttctgac ggcctcgagc ttgtcgcgcc acgaaaactg cgggttcgtc
     4261 ggggaaggca tggcagacga cgggaagccc gcgcccttcg agccgcgcgt ctcgtcgggc
     4321 gtcacgatga gcttgctcgc ggtgacggga cgatcgtccg gatcacggtg ctcgttcttc
     4381 ttgtcgggcg ccgacggcgg cggcgtggct cgctcgcgca tggtttcgcg gacgaggttc
     4441 ggcttgccct tgcgcgaatc acgcttcgct ttctgcgcct tggcggctct gagatcgggc
     4501 ttaccgatga agcccgtgat ctctttgagc ggccgatcgg agacgctcgt cacgcccacc
     4561 tggaaggacc tcttctgttg cgcgatgctc gtgcggagcg cggccacttt ggtcttcacc
     4621 gtggtggacg ccttggtttc gagctcgacg tagcgccgca cgcgcgcggt cagcgccgcc
     4681 attttttcgg tgacgagcgg ctgcgtcacc ccgcgcttct gaggcgagcg caggttcgag
     4741 cggcgctgcg cgggcctggc aaacggcttc ggctgctcga gcccgccgcg gcgcagctcg
     4801 gcgaggctct tcttgcggcg cggcttggcg agcggattgc cgcgtgcttg acgctcgacg
     4861 tctttctgaa cgagcgccgt cagctgctgc aggtgctggg tgaaatggcc gccggccgcc
     4921 gaggtgaccg gcgcggccgg cggcgcaggc gtggaggttc cggccgcgtg caaggccggt
     4981 ttgggcggaa cgctgatggg cggtttcggt ggcagcgccc cggctggcac ggcgacactc
     5041 gcggccccgg cggcgaggag cgtcaacgcc aagcaagtga tccctcgtct cagcatgcaa
     5101 gcgagaagtc ccatcgctcc attgaggcgt caacactcgt gctaggactc cctcgtgctc
     5161 accgccgaag acccgaaggg cggctcgccg ccgttgccgc acaaggaacc gaagccccct
     5221 tggctcaaag tgcgcgcgcc cggaggcgag acgtacgcga agctcaagca gacgctgcgg
     5281 agcctcgacc tttacactgt gtgcgaggaa gcgcgctgtc cgaacgtcgg cgaatgttgg
     5341 accgccggca cggcgacgat catgctgctc ggccacacgt gcacgcgcgg ctgccgcttt
     5401 tgcgccgtga cgacgggcaa tccgcgcggc gcctacgatc cgcgcgagcc cgagcacgtc
     5461 gcgcgtgcga tcgcgacgct cgacctcaag tacgtcgttt tgaccatggt agatcgcgat
     5521 gatctgatcg acggcggcgc gctccaggtc gcgcgcaccg tcgacggcct gcgcgaacgg
     5581 cggcccgagt tgctcgtcga gacgctcgtc ggcgactttc gcgggcggct cggcgacgta
     5641 gacgtagtgt tgcgttcggc gcccgccgtc ttcgcccaca acgtagaagt gactcgccgg
     5701 ctcacgccgc tcatccgtga cgcgcgctgc gactacgatc tgtcgctcgg cgtactccgt
     5761 cacgccaagg agcgcgcccc cgagcgcttc gtgaagagct cgatcatgct cggcctcggt
     5821 gaaagccgag acgaggtgga cgagacgctc gctgatttgc gcgcggccgg cgtcgacatc
     5881 gtgacgctcg gtcaatatct ccggccgacg ccgaagcacg ccaaagtgga ccgctacgtg
     5941 acacccgagg agttcgccga ctacgaggcg cgtgcttacg cgctcgggtt cgccttcgtc
     6001 gcgtcggggc cgctcgtgcg gtcgagctac cacgccgctg aaggtttcgt ggccgcgcgg
     6061 ctgaatcccg cgagcgcgag cgggctcgca ccgcggccgg tcgcgagcaa acctccggag
     6121 cccggtgttc cggcgggcgg tctcctgagt ccgagcgcac tcgtgcggcg ctcgccgagc
     6181 ccccgctgac ccgagtctcg cgctccggcc ccggagcaag gtaacgatta ttacggcgag
     6241 attccgggaa atatgacggc tctttcaagc cgggctcgat gcggtgtagc ttcgagaacg
     6301 ctcgccgacg tagcacggcg ggacttcctc atgcccgcta acaacgcgtc cttgatcggg
     6361 aaagtcttga gccagttgag ccggccgccg aactacgcgg accgcggggt gaaggattcg
     6421 attttggtcg catccgcagc gtcctacggc agaagctcgg aagacgacct cacgcagccg
     6481 accggtttcg atcccgaagc cgcacggctg ttcgaggcca tcgtcgaaag cgcgttcctc
     6541 gtggccacgg ccgacggcga gttcgacggc accgagcagg cggcctttca gcacgttgtg
     6601 ctcgaggcgt gcggcggccg cgtggccgag cgccagatcg ccgcgttgct cggcgacttg
     6661 cacgatcaag tcgccgaaga cggcgtcgac aagcgcatcc agatggtggc gcgcagcatc
     6721 gcgcgcgagg accacggccg agaagtactg cgcgttgcgg ccctactcgc gtacgtctcg
     6781 ggcggcgtga gcgatatcga acgctccatg ctcgatcgcc tcgccctggc gctcggcctg
     6841 aacgcgcaag caacttcgac cgctttgtcc gaggtggcct ccgcgctttc ggactagtca
     6901 ggcgccttcg cggtccattt cgacaggccc gccctcgttt tttcggcatg acggccgaaa
     6961 cgttggtgct atcttccgcc gcgctcgtgg cgcccggacg agagccgcgg cgagcgagac
     7021 gtgagccgag ctggatgaat cgatgagctc cgagcagagc aggcgttcgg gcagcagtga
     7081 cccgagcgca atcgtcagcg tattgcgaga cgacggcacg ctggatcccg cgcacgaccc
     7141 tggactcggc gatgacgagg tgaaattcct ctatcgccac ctcgtgcaga cgcgccagct
     7201 cgacgagcgc ttcgtcgcgc tccagcgcca gggtcgcatc ggctttcacg tggggtcgct
     7261 cggggaagag gccgcgatcc tcggttcggc gttcgcgatg cgaaagcagg attggctctt
     7321 cccctgctac cgcgagttcg gtgcggcgct catgcgcggc ctctcgctgc agaagctttg
     7381 cgacaacatg ttcggcaacg cgaacgatac cgtcaagggc cgtcagatgc cgtgtcacta
     7441 cacctgcaag gcggtcggct ggacttcgat cagctcgccg gtcggcacgc agatcactca
     7501 cgccgtgggc gccgcctggg ccgccaagat ccgccacgag gacgcggcgt cgctcgtcta
     7561 cttcggcgac ggtgcgacga gctcatcgga ctttcacagc ggcctgaact tcgcgggcgt
     7621 ctttcatttg ccggtcgtct tcctctgtcg caacaacggc tgggccatca gcgtgccggt
     7681 cgagcgccag acggccacgc aaacgttcgc ggaaaaggcc gtcgcttacg gcatccccgg
     7741 cgtgcgcgtc gacggcaacg acatcttcgc cgtcgtctcg gtcacgcgcc gagccatcga
     7801 gcgcggcatg cgcggcgaag gaccgacgct ggtcgaagcc atcacctacc gcatgggcgg
     7861 gcattcgacg agcgacgacc ccaatcgcta tcgcgagagc gaggcggttc aggcgtgggc
     7921 ggcgcgcgat cccatcgagc gggtgcggag ctacctcgtg cagcggggcg cgtggagtga
     7981 ggccgacgac aagacgctgc gcgccgacat cgacgcgcgc ttccgcgagg ccgtggccgt
     8041 cgccgaaaag acgccgcccc ccgcgctcga gtcgatgttc gacgacgttt acgccaaagt
     8101 gccgtggcat ctcgcggagc agcgcgcgga gctagtcgcg ggaccgcgcg cgccgtcgcc
     8161 ccacggataa gacgcatggc ttccatcaac atggttcagg ccatcaacga cgcgcttcgc
     8221 gtcgccatgc gtagcgatca gcgcgtggtc gtgctcggcg aggacgtggg caaggtcggc
     8281 ggcgtgttcc gggtcacggc gggcctgcag gacgagttcg gggaggaacg cgtgatcgac
     8341 acgcccctca gcgaaaacgg catcgtcggc tccgccgtcg gcatggcgct ctacggcatc
     8401 gtgcccgtcg tcgagatcca attcgccgat ttcatctggc cggcctacga ccagatcgtc
     8461 aacgagctcg cgaagtaccg ctaccgttcg ggcggggaat actcggccaa aatcgtgatc
     8521 cgcacgccgg tcggcggcgg catccgtggc gggcactatc actcccagca cccggaggcg
     8581 cagttcatcg gtgtccccgg gctcaaggtc gtgatcccgt cgaaccctta cgacgccaag
     8641 ggcctgctgc tagcttcgat ccgcgatccc gatccagtca tctttttcga gcccaagcgc
     8701 gtttaccgcg ccgccaaggg cgaggttcca gacggcgact acaccgtgcc gctcgagacg
     8761 gcgagcgtcg tgcgcccggg ccgccacgtg accgtgctcg cgtacggcgc gatgctgtac
     8821 gaagcgctcg acgctgccac caaagccgca gaaaagggcg ttgacgccga ggtgatcgat
     8881 cttcgcacgc tctggccgct cgacatcaac accgtcatcg acagcgtgaa acgcaccgga
     8941 cgcctcgtgg tcgtgcacga ggcgccccgc acggccggtt tcggcgccga gctcgtgacg
     9001 ctcgtctgcg agcgcgctct ctaccatctc gaagccgcgc ccgtgcgcgt aacgggcttc
     9061 gacacgccgt ttccctacac gctcgagatg gaatacctgc cgttgtcaca tcgaattttg
     9121 ccggcgatat tatcggtcgt gaggtcgtag cgggcttggg gccaaagtag cttgggtggg
     9181 gtttctgttt ggggttcggc gatggtgtgc gttgatgcga ttcgcgtgat cggaagggca
     9241 cgccgcgccg gtttcgccgg tagttgcgtg ggtgggtgca ctctcttgcc gatcgtgatc
     9301 tggtctgcca agacttcaag ggcgatccgg gccgcggctc agccgcggcc ggcctgcaca
     9361 ctgcggcagt ttccgggcgt tagcagcgcg gagggcactc gcggcgagcg gctggggaaa
     9421 gcgaatcgtc gcgcgctcga tgcggtggcc gacccggccc gtatacgtac acgccgcact
     9481 gtgcgcggcc ggaaaaaatt gctagaacgg cacccgcgca tgtcgaagct cgagttcaag
     9541 ctgccggaca tcggcgaagg cgtcgccgaa ggtgaaatcg tcaactggct cgtccaagag
     9601 ggcgacgccg tggcggaaaa ccaagagatg gtggaggtga tgacggacaa agcgaccgtc
     9661 accatcggcg ccccgaaagc cggcaaggtc gccgagcgcc gctttaaggt gggcgacacc
     9721 gtccccgtgg gcggcgtgct cgtcgtgctc gatctcgaag gtggcggcgc tcccgaagcc
     9781 ccggctcccg cacccgccgc tacacccgcc gcgaagcccg cgcccgcacc cgccgccaag
     9841 tcggacgcgc aaagcagcgg gcccgtcgcg tccgccgtag gtgacattcg cgagaacctg
     9901 ccgggcatga acgcggcgcc cgcgccgcgc gcgaacgact acttcaccga caagccgctc
     9961 gccgcccccg cgacgcgcaa gcttgctcgc gagctcggcg tcgatttgcg tcaagtcgct
    10021 ccgtccggtt cctccggccg cgtcacgcgc gaggacgtcg aacgtcac
//
LOCUS       DATIML010000801         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1035861, whole genome shotgun sequence.
ACCESSION   DATIML010000801 DATIML010000000
VERSION     DATIML010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1035861"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VLJ38_13795"
     CDS             complement(<1..217)
                     /locus_tag="VLJ38_13795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40645.1"
                     /translation="MKRIRALVVDDSAFARKVMRESLAASSEIEVVATATDGIDALEK
                     IAELDPDVITLDLAMPNLDGVGVLKALP"
     gene            complement(214..1035)
                     /locus_tag="VLJ38_13800"
     CDS             complement(214..1035)
                     /locus_tag="VLJ38_13800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HSU40646.1"
                     /translation="MTGVQLSPPVFAILSGLIEERFGIHYDAEDRELLADKLAPRAAE
                     RGFDSLLDYYYFLRYDAGAQAELAYLAEALVVNETYFFREAPALELTASTFIPELVRQ
                     GIRPRVWCAACATGEEPLTLAMLLDAAELLDAVTLIASDISRRALAHAQEGVYLRRSL
                     RALPAFAAGRWFTPIENGMRIERRLTEAIDWRRINLIDAATIATLGEFDIVLCRNVLI
                     YFSDATVQTVLDVVAGTLRPNGRVIVGTSESLLRFQSALVCEERGGAFFYRKAQS"
     gene            complement(1032..>1628)
                     /locus_tag="VLJ38_13805"
     CDS             complement(1032..>1628)
                     /locus_tag="VLJ38_13805"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU40647.1"
                     /translation="DPDLHRAALVALGISKLRQALPHLLAALAGGDAATRLVALSALA
                     ELGLPEAVPAIARATEDRDEGVRVAATGFLAARSDTAATEELIQLLRKSPERAAIVAA
                     LGRAAPGRVRAISDALVAADDAVAGALVGSLAHMGSAEALDGIRQALHSKNDAARRAS
                     ASALVALQDAESTPALAQAALKDPDAEVRRISAAALRS"
BASE COUNT          271 a          555 c          564 g          238 t
ORIGIN      
        1 cgggcagcgc cttgagcacg ccgacgccgt cgaggttcgg catggccaga tcgagcgtga
       61 tcacgtcggg gtcgagctcc gcgatcttct cgagcgcgtc gatgccgtcc gtcgccgtcg
      121 ccacgacctc gatttcggag ctcgcagcca ggctttcacg cattactttg cgcgcgaacg
      181 ccgaatcatc gaccacgagc gcacggattc ttttcacgac tgggccttac ggtagaagaa
      241 agcacccccg cgctcctcgc acacgagcgc ggactggaag cgaagcagcg attcggacgt
      301 gccgacgatc acgcgcccgt tcggccggag cgtccccgcg accacgtcga gcaccgtttg
      361 caccgtcgcg tcgctgaaat agatcagcac gttgcggcaa agcacgatgt cgaactcgcc
      421 gagcgtcgcg atcgtcgccg catcgatcag gttgatccgg cgccagtcga tggcctcggt
      481 gaggcgacgt tcgatgcgca tgccgttctc gatcggcgta aaccagcggc cggccgcgaa
      541 ggccggcagc gctcgcagcg agcgccgcag gtacacgcct tcctgggcat gcgcgagcgc
      601 ccggcggctg atgtcgctcg cgatgagcgt cacggcgtcc aagagctccg cggcgtcgag
      661 caacatagcg agagtgagcg gctcttcccc cgttgcgcaa gcggcgcacc acacccgcgg
      721 ccgaatgccc tgccgaacga gctcgggaat gaaggtgctg gcggtgagct cgagcgcggg
      781 ggcttcacga aagaagtagg tttcgttgac gacgagcgcc tcggccaagt acgcgagctc
      841 ggcctgtgcc cccgcgtcgt agcggaggaa gtagtagtaa tcgaggaggg agtcgaagcc
      901 gcgttccgcc gcgcgcggtg cgagcttgtc cgcgaggagc tcgcggtctt ccgcgtcgta
      961 gtgaatgccg aagcgctcct cgatcaaacc gctcagaatg gcaaacaccg gcggcgaaag
     1021 ctgcacgccg gtcatgagcg cagcgcagcc gcgctgatcc tacggacctc ggcgtccgga
     1081 tccttgagcg ccgcctgcgc cagagcggga gtgctttcgg cgtcctggag tgccacgagc
     1141 gccgacgccg aggcgcggcg cgcagcatcg ttcttcgaat gcagcgcctg ccgaatcccg
     1201 tcgagcgctt ccgccgagcc catgtgggca aggctgccga cgagcgcccc ggcaaccgcg
     1261 tcgtctgccg cgacgagcgc gtcgctgatg gcccggacgc gtccgggtgc ggctcgcccg
     1321 agcgcggcga cgatcgcagc gcgctccgga ctctttcgca agagctgaat gagctcctcg
     1381 gtcgcggcgg tgtccgagcg cgccgccaag aagccggtgg ctgcgacgcg cactccctcg
     1441 tcgcgatcct cggtcgcgcg cgcgatcgcc ggcaccgctt cgggcaagcc gagttcggcg
     1501 agcgccgaca gcgcgacgag gcgcgtcgcc gcgtcgccgc cagcgagcgc ggcgagcagg
     1561 tgaggcaacg cctgacggag cttggaaatc ccgagggcga ccagcgcggc gcgatgcaga
     1621 tcgggatc
//
LOCUS       DATIML010000802         7056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3344016, whole genome shotgun sequence.
ACCESSION   DATIML010000802 DATIML010000000
VERSION     DATIML010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7056
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3344016"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VLJ38_13810"
     CDS             complement(<1..587)
                     /locus_tag="VLJ38_13810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40648.1"
                     /translation="MLATVAFGFARDGLAHFAARPAQGRAKAERPGPLPAPLPLPLSE
                     TAWLSGGLDRFHYLRLAPAPTLSWIGRYQHPGQNHVPEWRAFFDGRYGVARLEAPALT
                     WRFSEAWQPLALPLVVTRPCPRWKTPLPLTVARYAGESERLPLFDCEGAVAPEVIDRL
                     SVLARAPETPRPALPLPESAQAERPGEWLPGLRLL"
     gene            complement(674..1333)
                     /locus_tag="VLJ38_13815"
     CDS             complement(674..1333)
                     /locus_tag="VLJ38_13815"
                     /inference="COORDINATES: protein motif:HMM:NF037009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSU40649.1"
                     /translation="MMTTEQPAVPPARKPNEENGAAARSADWENPRVASILSAAAKCF
                     ARKGFTATTLAEIGKELGLRKSIVHYYFASKAALIHEVQSFTYHRYLDRLKEAIRNGD
                     GSPQQATDALRALWDAIQSNKTGTGLNIEVWSAARRDAELKRRAAGLQRDARQVVRDA
                     VAGSTKSPRSEALATLVLAVLNGLSVTEYLEGDELKAKEAYEAFLGLLQTALETPTNG
                     S"
     gene            complement(1531..3195)
                     /locus_tag="VLJ38_13820"
     CDS             complement(1531..3195)
                     /locus_tag="VLJ38_13820"
                     /inference="COORDINATES: protein motif:HMM:NF016202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanW family protein"
                     /protein_id="HSU40650.1"
                     /translation="MSLFARLRELFSRFPGGRTGGALAIAVTAGLLSGFLLVPRLPEA
                     GTPPKDPLSVELLGRALPLDARAGALALERVRTYAARRFALELPGGERRELYLGQLGA
                     EIDKQRLAELVREARDPTSPMVRAYREGGRHGPLSLPVPVSLNRDQALPALATLKDAI
                     DRAPVDARLDLETRKLVPEANGRLLDIDATLLALDRALEAGATSARVVWSERGPKRTA
                     KDLDGVRFDDVLGWFETRYDRSEKYAARTFNLRIAASKLDGHVLLPGEIFDFNELVGP
                     RDEANGYKVAPVIAEGEVVDGIGGGTCQISGTLHGAAFFAGLGIVDRTPHTRPSAYIK
                     LGLDATVVYPTINLRFQNTLDFPIVLHETVKNGVVRAEILGPRRTRTVTLIRRILDAI
                     PYEEVERPDKSLPSGVRVLAQRGVAGFKLRRYRIVRDGTHAVRERWDDVYPPTTQIVR
                     VGAGEPSHDKPNVHDDVHPEYLADELLVTTQGPDEKDQSDDASLAGSKDEAMFESREP
                     GRFGKPGWTEQAGMPFWRGRSESTPRENGPAGDEKGRTPPKKRGPA"
     gene            3272..5374
                     /gene="uvrC"
                     /locus_tag="VLJ38_13825"
     CDS             3272..5374
                     /gene="uvrC"
                     /locus_tag="VLJ38_13825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HSU40651.1"
                     /translation="MSSADAPQDELTHKLESLPSSPGCYVFRDGKGVTLYVGKAKSLR
                     ARVRSYFQEGASDTRAFIPFLRRHVTDLETIVTRSEKEAAILENNLIKERKPRYNVKL
                     RDDKEYLSVRLSLEHEWPRLELVRRPKPDGARYFGPYHSATAVRRTLHLVEKHWKLRT
                     CSDRELASRKRPCLKYQIGRCPAPCVYAVDRELYAEQVRSVALFLEGRHDELSSVLAE
                     RMRSASERLEFELAGTYRDQLSAVRSVREAQGVVSVSDRDQDVVGLFREADLAELVVL
                     IVRSGRVVDTVSFSSARVELPDDEVIAAFLRDHYGEGGLGEAHLPDEVLVPVLPEGAD
                     GVAEWLSERRAAIVPQGARTPRNVQLLSPRRGPRSNLLELAQKNAQHAFEEKRRAESD
                     IDERLARVKERLRLPTLPRRIECSDISHLGGEDTVGSVVALLNGKPDKKRYRTYHVKS
                     AGPGDDYQAQYEVLRRRFARGRAAALAQLPNGASVEGEAPTVESPSSSSPETEAGSVE
                     PASNSSPEGEAPNVESPSGDPEWQLPDLFVVDGGRGQLGVALAAAHDLGLHELAIVGL
                     AKERENELGDKLVDRVYLPGQKNPIPLRPNSPELFMLALARDEAHRFANRGRKQTGKR
                     RRFDSALDHVKGLGEKTKKALLTKLGSVEAVRRASDEQLLQVPGVSRRHVDAVRRWLA
                     EGVGEPAEISPSTSPVVE"
     gene            5567..>7056
                     /locus_tag="VLJ38_13830"
     CDS             5567..>7056
                     /locus_tag="VLJ38_13830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40652.1"
                     /translation="MTQKIGTSPSWLSKAATAAGKGLTAVGLLFGAGVLTAGCLDRPV
                     APAIPTTTNVYINQIRQTGVDKIDLLFMIDNSISMADKQEILAAAVPVLVQRLIAPTC
                     VDMNGVPVGNGGVITQADGTCPKGSNSVPEFKPIKDIHIGLVTSSLGDHGSNDVCSDA
                     QNADNQANGNPPSFYNDMAQLLPSVRPAANLYSWNNSGFLVWDPRDQTMVLDKHTPQT
                     ANETDQGTFNKNFTAMVTAAGEHGCGFEASLEAWYRFLIDPEPVSQMSETGNDPPNMK
                     TPKIVSVRGPDPADVGPTPDKGFVHSKTIANNTVLEQRKNFLRPDSLVAIVMLTDEND
                     CSIQDEDGTQGWLVGWKGGVGKNSFGMPRANSACANPNDPCCRPCISGNSKCADNAAD
                     PVCAMGPYLGTTTMNNEDNTNERCYNQKKRFGIDLLYPTSRYSEGLKSLTIHPRFGGP
                     EVPNPLYASVNGQPPRDSGLVFLAGLVGVPWQDISTMESWQGPHLT"
BASE COUNT         1177 a         2407 c         2331 g         1141 t
ORIGIN      
        1 tcgagcaggc gcaagccggg gagccattcg cccgggcgct cggcttgggc gctttccggc
       61 agcgggagcg cgggacgcgg cgtttccggt gcgcgcgcga gcacgctcag ccggtcgatg
      121 acctccggcg cgacggcgcc ctcacagtcg aagagcggga gccgttcact ttcgcccgcg
      181 taacgggcga cggtgagcgg cagcggcgtt ttccagcgcg ggcaggggcg cgtcacgacc
      241 agcggcaacg cgagcggctg ccaggcttcc gaaaatcgcc aggtgagggc cggagcctcg
      301 agcctcgcga cgccgtaacg gccgtcgaaa aacgcacgcc actccggcac gtgattttgg
      361 cccgggtgct gatagcgccc aatccacgac aaggtcggtg ccggcgcgag ccgcaggtag
      421 tgaaatcggt cgagcccgcc gctgagccac gccgtctcgc tgagcggcag cggcaacggg
      481 gcgggcagcg gtcccggcct ttccgctttg gctcggccct gcgcgggccg agccgcaaaa
      541 tgagccaagc cgtcgcgcgc gaaaccgaac gcgacggttg ccagcatcag tgcgctgccg
      601 agcgcgcgcc cgaaagcgcg cgatcgccga gtccgcgtgg cgctgctcac ccgcacggag
      661 gagccgtccg cgactacgag ccgttcgtcg gcgtttcgag ggccgtctgc agcaggccga
      721 ggaacgcctc gtaagcttcc tttgccttga gctcgtcgcc ctcgaggtac tcggtgacgc
      781 tcaggccgtt cagcacggcg agcacgagcg tcgcgagcgc ttcggagcgc gggctcttgg
      841 tcgagccggc gaccgcgtcg cgcacgacct ggcgcgcgtc gcgttgcagg cccgccgcgc
      901 ggcgcttgag ctcggcgtca cggcgcgccg cgctccaaac ttcgatgttg agtccggtgc
      961 ccgtcttgtt gctctgaatt gcgtcccaga gcgcgcggag agcgtccgtc gcctgctgcg
     1021 gcgagccgtc accgtttcga atcgcttcct tcaagcggtc gagatagcgg tgatacgtga
     1081 agctctgcac ctcgtggatc agcgcggctt tgctggcgaa gtagtagtgg acgatgctct
     1141 tcctgaggcc gagctccttg ccgatttcgg cgagcgtcgt tgcggtgaag cccttacgag
     1201 cgaagcactt cgccgcggcc gaaaggatcg acgcaacgcg agggttctcc caatcggcgc
     1261 tgcgagcggc ggcgccgttt tcctcgttcg gtttgcgggc gggggggact gcgggttgtt
     1321 ccgtggtcat catgggttga ttcgcttacc ggccagccgg tgtcagaggg atctaatctg
     1381 ggaggacctt acgcctctcg tcccgggccg gcgttcttcg cctagctcgt gcgtcgagtc
     1441 aagcctcggc atctcagggc atttctcgcg ggccggtggt gcaagcggcg gaaacataac
     1501 ttcatttgcg cggcgccgtc gagcgttcgc tcaagccggc ccacgtttct tcggaggagt
     1561 gcgccccttt tcgtctccgg ccggcccgtt ctcccggggc gtactttccg accggccgcg
     1621 ccagaacggc atcccggcct gttccgtcca gccaggctta ccgaagcgac ccggctcgcg
     1681 cgattcgaac atggcttcgt ccttcgagcc ggcgaggctg gcgtcgtcgc tttggtcctt
     1741 ctcgtcgggg ccctgggtcg tgacgagcag ctcgtcggcg aggtactcgg ggtgcacgtc
     1801 gtcgtggacg ttcggtttgt cgtgcgaggg ctcgccggca cccacgcgga caatctgtgt
     1861 cgtcggtggg tacacgtcgt cccagcgctc gcgcacggcg tgcgtgccgt cgcgcacgat
     1921 gcgatagcgc cggagcttga aacccgcgac gccacgttgc gcgagcacgc gcacgccgct
     1981 cggtagtgac ttgtcggggc gctcgacctc ttcatacggg atggcgtcga ggatgcggcg
     2041 gatgagtgtc acggtgcgcg tgcgccgcgg accgaggatc tccgcgcgca cgacgccgtt
     2101 cttcaccgtc tcgtgtagga cgatggggaa gtcgagcgtg ttttggaaac gtaagttgat
     2161 cgtcgggtag acgacggtcg cgtcgaggcc gagcttgatg tacgcgctcg gccgcgtgtg
     2221 cggcgtgcga tccacgatgc cgagccccgc gaaaaatgcc gcgccgtgta gcgtgcccga
     2281 aatttggcag gtgccgccgc cgatgccgtc gacgacctcg ccttcggcga tcacgggcgc
     2341 gaccttgtag ccgttggctt cgtcgcgcgg gcccacgagc tcgttgaagt cgaagatctc
     2401 gccgggcaag agcacgtgcc cgtcgagctt gctcgcagcg atgcgcaggt tgaaggtgcg
     2461 cgcggcgtat ttttcggagc ggtcgtaacg cgtctcgaac cagccgagca cgtcatcgaa
     2521 gcgcacgccg tcgaggtcct tggccgtgcg cttgggcccg cgctcgctcc agacgacgcg
     2581 cgcgctcgtg gcgcccgctt cgagcgcgcg gtcgagggcc aagagcgtcg cgtcgatgtc
     2641 gagcaagcgc ccgttcgctt cgggcacgag cttgcgcgtc tcgagatcga gtcgcgcgtc
     2701 gacgggcgcg cgatcgatcg cgtctttcag cgtcgccagc gcgggcagcg cctgatcgcg
     2761 gttcagactc accggcacgg gcaaactcag tgggccatgc cgcccgccct cccggtacgc
     2821 gcgcaccatc gggctcgtcg gatcgcgcgc ctcgcgcacg agctcggcga ggcgctgctt
     2881 gtcgatttcg gccccgagtt ggccgaggta gagctcgcgt cgctcgccgc caggcagctc
     2941 gagcgcgaag cgccgggcgg cgtacgtccg cacccgctcg agcgccagcg caccggcgcg
     3001 cgcatcgagc ggcagcgctc gacccaaaag ctccacgctg agcggatcct tcggcggcgt
     3061 gcccgcctcc ggcagccgag gcacgagcaa gaacccgctg agcagtcccg ccgtgacggc
     3121 gatggcgagc gcgccccccg tccggcctcc ggggaagcgt gaaaaaagct cacggaggcg
     3181 ggcgaaaaga ctcaaaaccg ccagacctct agcacgccgg gcgcgtgcgt ggcctagcgc
     3241 cgctcggcgc gccgagcgct agtctagcgc aatgtcgagc gccgacgcgc cgcaggacga
     3301 gctcacgcac aagctcgaga gcctcccgag ctcaccgggt tgctacgtct ttcgcgacgg
     3361 caagggcgtg acgctctacg tcggcaaggc gaagagcctg cgcgcgcgcg tgcggagcta
     3421 tttccaggag ggcgcctccg acacgcgcgc cttcattccg tttttgcgcc ggcacgtcac
     3481 cgatctcgag accatcgtca cgcgcagcga aaaagaagcc gcgatcctcg agaacaacct
     3541 gatcaaggag cgcaagcctc gctacaacgt caagctccgc gacgacaaag agtacttgag
     3601 cgtgcgcctc tcgctcgagc acgagtggcc gcggctcgag ctcgtgcggc ggccgaagcc
     3661 ggacggcgcg cgctacttcg gcccgtacca ctccgcgacg gccgtgcgcc gcacgctgca
     3721 cctcgtcgag aagcactgga agctccgcac ctgctcggac cgcgagctcg cgagccgcaa
     3781 acggccgtgt ttgaagtacc agatcggccg ctgcccggcg ccctgcgtct acgccgtgga
     3841 ccgcgagctt tacgccgaac aagtgcgttc ggtcgcgctc tttctcgagg gccgccacga
     3901 cgagctctcg agcgtgctcg ccgagcgcat gcgttccgcg agtgagcgcc tcgagttcga
     3961 gctcgcgggc acctaccgcg atcagctgtc cgcggttcga tccgtgcgcg aggcgcaagg
     4021 cgtcgtctcc gtgagcgatc gcgatcaaga cgtggtcgga ctctttcgcg aggcggatct
     4081 cgccgagctc gtcgtgctca tcgtgcgctc gggacgcgtc gtcgataccg tgagtttctc
     4141 gagcgcgcgc gtcgagctcc ccgacgacga agtgatcgct gcgttcttgc gtgatcacta
     4201 cggcgaaggc gggctcggcg aggcgcacct gccggacgaa gtgctcgtac cggtgctgcc
     4261 cgaaggcgcg gacggcgtcg ccgagtggct cagcgaacgg cgagcggcga tcgtgcccca
     4321 gggtgcgcgc accccgcgca acgtgcagct cctgtcgccc cgccgcggcc cacgctcgaa
     4381 cctgctcgag ctcgcgcaaa agaacgccca gcacgcattc gaagagaaac ggcgcgccga
     4441 gagcgacatc gacgagcggc tcgcgcgcgt caaagaacgc ttgcgtctgc ccaccttgcc
     4501 gcgccgcatc gaatgctcgg acatctcgca cctgggcggc gaagacaccg tcggctcggt
     4561 cgtcgcgctc ctgaacggca agcccgacaa gaagcgctac cgcacctacc acgtgaaatc
     4621 agcggggcct ggtgacgact accaggcgca atacgaagtg ctccgtcgcc gcttcgcgcg
     4681 cggccgcgcc gcggcactcg ctcagttgcc gaacggtgcg tccgtcgaag gcgaagcgcc
     4741 gaccgtcgag tcgccgtcga gctcgtctcc cgaaaccgaa gcgggaagcg tcgaaccggc
     4801 gtcgaactcg tctccggaag gcgaagcccc gaacgtcgaa tcgccgtcgg gcgaccccga
     4861 gtggcagctc cccgatctct tcgtcgtcga tggtggccgc ggtcaactcg gcgtcgcgct
     4921 cgcggccgct cacgacctcg gcctgcacga gctcgcgatc gtgggcctcg ccaaggagcg
     4981 ggagaacgag ctcggcgaca agctcgtcga ccgcgtctac ctcccgggcc agaagaaccc
     5041 catcccactc cgtccgaaca gccccgagct cttcatgctc gcgctcgccc gcgacgaagc
     5101 ccaccgtttc gccaaccgcg gtcgcaagca aaccggcaag cgccgccgct tcgactctgc
     5161 gctcgaccac gtcaaaggcc tgggcgaaaa gaccaagaaa gccctgctca ccaagctcgg
     5221 ctcggtcgaa gcggtgcgtc gcgcgtccga cgagcagctc ctccaagtgc ccggcgtcag
     5281 tcgccggcat gtggacgccg tacgccgctg gctcgccgag ggggtaggcg agccagcgga
     5341 gatttcaccg agcacgtcgc cggtggtgga gtagagtaca tccgaccagc gatccggggg
     5401 gtggaaactg ggttgtcaac cgcctgcagc ctgtgccaac caagttgcca gcgttggttc
     5461 atcgattacc gcagttctcc atagttacac gcggcacgcg ccttgcgttg acactatacc
     5521 gcgtcgacct ttaggctctc ggcgcccctt tttggagctc gatctcatga cgcagaaaat
     5581 tggcacgtcc ccctcatggc tcagcaaagc cgccaccgcg gcaggcaagg gcctgactgc
     5641 ggtcggcctg ctcttcggcg ccggtgttct caccgccggc tgtctcgatc ggccggtcgc
     5701 acccgccatc ccgactacga cgaacgttta tatcaaccag atccggcaaa cgggcgtcga
     5761 taagatcgac ctgctgttca tgatcgataa ctcgatctcg atggcggaca agcaggagat
     5821 cctggcggcg gccgtgccgg tgctcgtgca gcgactgatc gcgccgactt gcgtcgacat
     5881 gaatggcgtt cccgttggga acggcggcgt catcacgcag gctgacggta cgtgtcccaa
     5941 aggcagcaat agcgttccgg agttcaagcc gatcaaggac atccacatcg gcctcgtgac
     6001 ttcgagcctc ggtgaccacg gcagcaacga cgtgtgctcg gacgcccaga acgccgacaa
     6061 ccaggcgaac ggcaaccctc cgtcgttcta caacgacatg gctcagctgc tgccgagcgt
     6121 gcgtcccgcg gccaacctct acagctggaa taacagtggc ttcctcgtct gggatccacg
     6181 cgaccagacg atggtgctcg acaagcacac gccgcagacg gccaacgaga cggaccaggg
     6241 gacgttcaac aagaacttca ccgcaatggt cacggcagcc ggagagcacg gctgcggctt
     6301 cgaagcttcc ctggaagctt ggtatcgctt cctgatcgat cctgaacccg tgtcgcaaat
     6361 gtcagagacg ggcaacgatc cgccgaatat gaagacgccc aagatcgtga gcgtgcgcgg
     6421 tcccgatccg gcggacgtgg gcccgactcc tgacaaaggg ttcgtgcatt cgaagacgat
     6481 cgccaacaac accgtgctcg agcagcggaa gaacttcctg cgtcccgatt cactggtggc
     6541 gatcgtgatg ctcaccgatg agaacgactg ctcgattcag gacgaggacg gcacgcaagg
     6601 ctggctcgtc ggctggaagg gcggcgtcgg caagaacagc ttcggtatgc cgcgcgcgaa
     6661 ctctgcctgc gcgaacccga acgatccgtg ctgccgcccc tgcatctcgg gaaattcgaa
     6721 gtgcgcggac aacgccgcgg atccggtctg cgccatgggc ccctacctcg ggaccacgac
     6781 catgaacaac gaggacaaca cgaacgagcg ctgttataac cagaagaagc gcttcggcat
     6841 cgatctcctc tacccgacga gccgctactc cgaaggcctg aagagcctca ccatccaccc
     6901 ccggttcggc ggccccgaag tgccgaaccc gctctacgcg tcggtgaatg gtcagccccc
     6961 gcgtgactcg ggtctcgtct tcctcgccgg tctcgtcggc gtgccgtggc aggacatctc
     7021 gaccatggag agctggcagg gcccgcacct cacgta
//
LOCUS       DATIML010000803         1858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1615144, whole genome shotgun sequence.
ACCESSION   DATIML010000803 DATIML010000000
VERSION     DATIML010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615144"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="VLJ38_13835"
     CDS             complement(<1..237)
                     /locus_tag="VLJ38_13835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40653.1"
                     /translation="MVTYAFEKLYADLVTADGTVCIVYVAWTELFGVRRQTAGVELYT
                     PDGRREVMHARAAVELPELDAPEWRLRLELPSGPF"
     gene            complement(231..1706)
                     /locus_tag="VLJ38_13840"
     CDS             complement(231..1706)
                     /locus_tag="VLJ38_13840"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HSU40654.1"
                     /translation="MNAVVGAPSRVEALRTRSYVACVVVLYTAAFFALLPVVLWNVGA
                     AFDRGFALPPLSPAARPVGAVLFAAGALALLGSMSALVVRGRGFPISHLPPSFLVARG
                     IYARLRHPIYVAYTLTLLGAGLAAQSLGRSVLAPLLLWTGSVIYALGFEEPRLLARFG
                     PSYAEYARATPLLPVPFTAELAALAQRCWLAVRPLAERLANRTVLFRIGGSVWVTYGA
                     LVALGGVAGAVTAAPLLAGLGLSSALIAFYELGLALSMLAGGRLVWLAYEWRRVWREP
                     SIVVRRVGFVSFGGYAGFLLFTPFFAWLEHLPALALLDRTLPAAFLISACGRLGCLSY
                     GCCYGRPCRHGLRWSDPQSKVNREHGALGRVPRVPTPLLASGLAASLSALGFTLLAHA
                     ALPGAVSASVLLAYATLRFGIEHFRDEPRLWRLAFTKGQLLSLPIAVLALLLLVSLPP
                     GAVTPVEADFSVLPALGPVFAAVGLFAFVVCGFHHREVGRW"
BASE COUNT          385 a          640 c          645 g          188 t
ORIGIN      
        1 gaagggtccg ctcggcaact cgagccgcag acgccactcc ggcgcgtcga gctcgggcag
       61 ctccacggcg gcgcgcgcgt gcatcacctc gcgccgcccg tcgggcgtgt agagctcgac
      121 gccggccgtt tggcgacgaa caccgaagag ctccgtccac gcgacgtaca cgatgcacac
      181 ggtgccgtcc gcggtcacga gatcggcgta aagcttctcg aacgcatagg tcaccatcgc
      241 cccacctccc ggtggtgaaa gccgcacacg acgaacgcaa acaggccaac ggccgcgaat
      301 accggcccga gcgcggggag caccgagaaa tcagcctcta caggcgtcac agcgccgggc
      361 ggcagcgaga cgaggagcaa gagcgccagc acggcgatcg gcagcgagag gagctgcccc
      421 ttggtgaacg caagcctcca gaggcgcggc tcgtcacgga agtgctcgat gccgaagcgt
      481 agtgtcgcgt acgcgagaag cacgctcgcc gacaccgcgc ccggcaacgc agcgtgggcc
      541 aagagcgtga acccgagcgc cgaaagtgac gcagccaagc cggacgccaa gagcggcgtg
      601 gggacgcgtg gcacgcgacc gagcgcgccg tgttcgcggt tcaccttcga ttgcgggtcg
      661 ctccagcgca atccgtgccg acaaggccgg ccgtagcagc agccgtagct caagcagccg
      721 agccgaccgc aggcggagat gaggaacgcg gccggcagcg tgcgatcgag cagcgcgagc
      781 gccggcaagt gctcgagcca cgcgaagaac ggtgtgaaga gcagaaaccc ggcgtagccg
      841 ccgaaagaga cgaagcccac gcgccgcacg acgatgctcg gctctcgcca cacgcgccgc
      901 cactcgtaag caagccaaac gagccgccca ccggcgagca tggagagggc gagcccgagc
      961 tcgtaaaacg caatgagcgc ggacgaaagg ccgagcccgg cgagtagcgg cgccgccgtg
     1021 accgcacccg ccacaccgcc gagcgcgacg agcgcgccgt aggtgaccca cacgctgcct
     1081 ccgatacgaa acagcaccgt gcgattggca agccgctccg cgaggggccg cactgcgagc
     1141 caacagcgct gcgcgagcgc cgcgagttcg gccgtaaaag gcacgggcag gagcggtgtc
     1201 gcgcgcgcgt actccgcgta cgaaggaccg aagcgcgcga gcaggcgtgg ctcctcgaat
     1261 ccgagcgcgt agatgacgct gcccgtccag agcaacagcg gagcgagcac cgaacggccg
     1321 agcgattgtg cagcaagacc tgcaccgagc agagtgagcg tgtaagctac gtaaatcggg
     1381 tggcggaggc gtgcataaat cccgcgcgct acgaggaagc tcggcggcag atgcgaaatc
     1441 ggaaagcccc gcccgcgcac gacgagggca ctcatcgatc cgagcagcgc gagtgccccg
     1501 gccgcaaaca gtacagcccc cacgggtcgc gcggcgggtg aaagcggcgg cagcgcgaaa
     1561 ccacggtcga acgcggcccc gacgttccac agcacgacgg gcaagagcgc gaagaacgct
     1621 gccgtgtaga gcaccacgac gcaggcgacg taggaccgag tccgcaatgc ctcgacgcgc
     1681 gacggagcgc cgacgacggc gttcatggcc ggctccgcgc cgtgggctcg ctgctcccga
     1741 gcgcgttcca ctccggggtg tagccgcagt gccagtaaag agcgctctcg tcgtccgcgc
     1801 gcgtgtgcgc gagcgccgtg ctcatcgcgg cccacgtctt cccgccgaag atgggatc
//
LOCUS       DATIML010000804         1906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_457914, whole genome shotgun sequence.
ACCESSION   DATIML010000804 DATIML010000000
VERSION     DATIML010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457914"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VLJ38_13845"
     CDS             <1..442
                     /locus_tag="VLJ38_13845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40655.1"
                     /translation="TDGTALRTWGWIAEKYGIELWYAWEGLYFSDRYNDRQPTDTLHD
                     PVTFDERTRGGSDFGNGDGVLAYPGARPSLRLKALRRGLEDRLLLRELERCGGTEAAK
                     RLIDRMVPKALGEAGRRASWPVAEADWEDARNELLNDVEAACRD"
     gene            435..1382
                     /locus_tag="VLJ38_13850"
     CDS             435..1382
                     /locus_tag="VLJ38_13850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40656.1"
                     /translation="MIERTWIAEERPLTDALRQSRRLVRQGLRRPLWVGLGSLGLAAV
                     LGLSLLFSSRSYTPRVVLRVIEADRDPGSMPKLKRKLGEYVRDGVFTSEPLLDLIHRY
                     HLYPKLVTVSPRRAVEAFKRDIDVEVYQNYFVEQRSENEAPRSARVAVSYRSGNRDTA
                     LSVTRDLGALVVVRMTAEREAQARRASETAKVGAETLEQALVTRLAAIADKQRELDGN
                     RTPDPTAQVELVSLLGSVPALQQQVDAAERRAAALDLGAAFEARGIGLRFDIAEDADA
                     PLFDRHSRLRLVGLAGAFVLGLPLVLLTVGAFNTERGTV"
     gene            1382..>1906
                     /locus_tag="VLJ38_13855"
     CDS             1382..>1906
                     /locus_tag="VLJ38_13855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40657.1"
                     /translation="MPEPPYARDDDGRELERMASLFRRALHAWPLTLLVLSLAAFACC
                     AFLYFRHPGYRSETVILYSAGVRQTDAAEQDDNPRSASVRLKELLMSRPKLAQVVTRF
                     GLYPETRAQYGVSDAVEEFKRHIEFKAPGGDTFSIAFTGKSPSEAQKVTQALAELVVA
                     GDAELRKTQAEQARD"
BASE COUNT          306 a          667 c          641 g          292 t
ORIGIN      
        1 caccgacggc acggccctgc gcacttgggg ctggatcgcc gagaaatacg gcatcgagct
       61 ctggtacgcc tgggaagggc tctacttctc ggaccgttac aacgatcggc agcccaccga
      121 cacgctgcac gatcccgtga cgttcgacga acgcacgcgc ggcggcagcg atttcggcaa
      181 cggcgacggc gtgcttgcct acccgggcgc gcgcccttcc ctgcgactca aggcgctccg
      241 gcgcgggctc gaagatcggc tgctcctgcg cgagctcgag cgttgcggcg gaaccgaagc
      301 ggccaaacgg ctcatcgatc gcatggtgcc gaaggcgctc ggggaggccg gccggcgcgc
      361 gagttggccc gtcgccgaag cagattggga ggacgcccgc aacgagctct tgaacgacgt
      421 ggaggcggct tgtcgtgatt gagcggacct ggatcgccga ggagcgtccg ctcacggatg
      481 ctttgcgcca gagccgcagg ctcgtgcggc aaggtctgcg ccggcccctc tgggtcgggc
      541 tcggcagcct tggcctcgcg gcggtgctcg ggctttcgct gttgttttcg agccgcagct
      601 acacgccgcg cgtcgtgttg cgcgtgatcg aggccgaccg cgatcccggg agcatgccga
      661 agctcaaacg caagctcggc gagtacgtgc gcgacggcgt cttcacgagc gagccgctgc
      721 tcgatctgat ccaccggtat cacctgtatc cgaagctcgt aacggtgagt ccgcggcgcg
      781 cggtcgaagc cttcaagcgc gacatcgacg tcgaggtgta ccaaaactac ttcgtcgagc
      841 agcgcagtga gaacgaagcg ccgcgctcgg cgcgcgtcgc ggtgagctat cgctccggta
      901 accgcgacac ggcgctttcg gtgacgcgtg acctcggcgc gctcgtcgtc gtacgcatga
      961 ccgccgaacg cgaagcccaa gctcggcgcg cctccgaaac ggccaaggtc ggcgccgaaa
     1021 cgctcgaaca agccctcgtg accaggctcg ccgccatcgc cgacaaacag cgcgagctcg
     1081 acggcaaccg cacgcccgac cccacggcgc aagtcgagct cgtcagtctg ctcggctccg
     1141 tgcccgccct ccagcagcag gtcgacgccg cggagcgccg cgccgccgcg ctcgatctcg
     1201 gcgccgcctt cgaggcgcgc ggcatcggct tgcgcttcga catagcggaa gacgccgatg
     1261 cgccgctgtt cgaccgccat tcgcgcttgc gcctggtcgg cctggcgggc gcgttcgttc
     1321 tcggcctgcc gctcgtgctc ctcacggtcg gcgccttcaa caccgaacga ggtaccgtct
     1381 gatgcccgaa ccaccttatg cccgtgacga tgacggccgc gagctcgagc gcatggcgag
     1441 cctgtttcgc cgcgcgctgc acgcctggcc gctcacgctg ctcgtgctgt cgctcgcggc
     1501 gttcgcgtgt tgcgcgttcc tctacttccg gcacccgggc tatcgctcgg agaccgtgat
     1561 cctctactcg gcgggcgtcc ggcaaacgga cgcggccgag caagacgaca acccgcgcag
     1621 cgcgagcgtc cgtttgaagg agctcctgat gtcgcgcccg aagctcgcgc aggtcgtgac
     1681 acgcttcggc ctgtacccgg agacgcgcgc tcagtacggc gtgagcgacg ccgtcgagga
     1741 gttcaagcgc cacatcgagt tcaaagcgcc cggcggcgac acgtttagca tcgccttcac
     1801 gggcaagtcg ccgagcgaag cgcaaaaggt gacgcaggcg ctcgccgagc tggtcgtcgc
     1861 gggcgacgcc gagctcagga agacgcaagc cgaacaagcg cgggat
//
LOCUS       DATIML010000805         7600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_458077, whole genome shotgun sequence.
ACCESSION   DATIML010000805 DATIML010000000
VERSION     DATIML010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7600
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458077"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1293
                     /locus_tag="VLJ38_13860"
     CDS             <1..1293
                     /locus_tag="VLJ38_13860"
                     /inference="COORDINATES: protein motif:HMM:TIGR03710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HSU40658.1"
                     /translation="TLKWIESKFGKRSDLVAANIAALKAGHAFGETAEVFQHRYEVPP
                     APVEKGEYRNIGGNTATALGLVAGAQLAGLPLVLGAYPITPASDVLHELSKYKQFGVT
                     TVQAEDEIAAVCLALGASYAGNLGVTSTSGPGMALKMEGIGLALSVELPLVIVDIQRG
                     GPSTGLPTKTEQADLLQAVYGRNSEGPVCVIAASTPGNCFSMAIEAVRLALKYMTPVI
                     LLTDGYLANGAEPWKIPNVAELPKIDVKFRTDPAGFHPFLRDPATLARNWAIPGTPEL
                     MHRVGGLEKDYDSGHISYAPDNHERMVKARAAKIAGIASDIPPLTMEVGEDSGKLLVL
                     GWGSTYGAIREAVQRCRDRGLSVSHAHLRYLNPFPQNLGEVLKRFERVLVPELNMGQL
                     VKMLRSTYLVPAEGLSKVQGQPFKITELEEKIRQVLES"
     gene            1461..2483
                     /locus_tag="VLJ38_13865"
     CDS             1461..2483
                     /locus_tag="VLJ38_13865"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HSU40659.1"
                     /translation="MSDLISPTKLTKKDFETDQDLRWCPGCGDYSILANVQRVMPEFG
                     IARENIVWVSGIGCSSRFPYYMNTYGFHTIHGRAPAVALGIKVANPELSVWLATGDGD
                     GLSIGGNHLMHCLRRNLDVKILMFNNRIYGLTKGQYSPTSELGKVTKSTPSGSVDQPV
                     DPASFALGVNASFVARSIDTEAQHLSDVLRRAAAHVGTAFTEIYQNCNVFNDGAFDAF
                     TDKAVRADRQVRVEHGKPLVFGANNDKGLRLNPRTLGLEIVAVGDGGVPLSDVLVHDE
                     TNPAFGLLLARMPFPEFPVAIGVLHASQRPTYDGTLRAQQKAAREKLGQPDLAKLLRG
                     GSTWTI"
     gene            2529..2669
                     /locus_tag="VLJ38_13870"
     CDS             2529..2669
                     /locus_tag="VLJ38_13870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40660.1"
                     /translation="MGTPQDPRTRRRQRLRRAKKNLAWEAARAHENAEAAKPKTPAKK
                     AT"
     gene            2864..3208
                     /gene="clpS"
                     /locus_tag="VLJ38_13875"
     CDS             2864..3208
                     /gene="clpS"
                     /locus_tag="VLJ38_13875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HSU40661.1"
                     /translation="MATDKPKTRPDTQGELGVQERPKVERPRKYVVVLHNDDYTTMEF
                     VVHVLMKFFHLDETESTQVMLHVHHRGFGIVGTFTRDVAETKAASVMAYAKEHQHPLR
                     CTAEPEGFGDSP"
     gene            3205..5502
                     /gene="clpA"
                     /locus_tag="VLJ38_13880"
     CDS             3205..5502
                     /gene="clpA"
                     /locus_tag="VLJ38_13880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HSU40662.1"
                     /translation="MKVSAEVEVACSFALREAVARRHDVMAVEHLLYALLHDEATARV
                     VRRSGGKVDKLKRALDRILTEEFKPISGDAPVQPTPTRGFQRVLQRAAIHVQSSGKDE
                     LKGQNVLVAIFAEADSPAVQAMNDSGLTRYDVASFISHGVAKDGTDDDALEVSPGAGG
                     SESEDEDGEPTGDPLERFAVNLNERAAAGEIETLVGREKELRRAIQVLSRRKKNNPLF
                     VGDAGVGKTAIVEGLADRIVKKQVPKPLLDAVIFSLDMGALVAGTRFRGDFENRVKAV
                     LKKLDERPGAILFVDEIHTVVGAGAASGGTLDAANLLKPALSSGKLRCIGATTFEEYR
                     THVERDRALARRFQKIEVNEPSLEETMQILRGLLPRYAEFHGVTYAPDAVDAAAKLAD
                     RHLHDRKMPDKAIDLIDEAGADAKLEDGDAAQVGVERIEAVVARMAQIPPKQVSSSDK
                     SALLNLERDLELVVFGQNRALRELATAIKLSRAGLRPREKPIGSYLFTGPTGVGKTEA
                     ARQLAKTLGIELIRFDMSEYMERHTVSRLIGAPPGYVGYDRGGLLTEAIAKTPHAVLL
                     LDEIEKAHPDVFNVLLQVMDHGTLTDNNGKKADFRHVVLIMTSNVGAQDLARGLVGFG
                     TRDTRGKEDIALRNTFSPEFRNRLDARIQFDPLAPEVMEKVVDKFMKELGDQLAEREV
                     TLSLTPKARTYLADKGYDKEQGARPLGRLIQDEVKRPLGDQLLFGDLEHGGHVTVDFD
                     GKAIRFEVQGRPPKAATSGGPKLLN"
     gene            complement(5569..6624)
                     /locus_tag="VLJ38_13885"
     CDS             complement(5569..6624)
                     /locus_tag="VLJ38_13885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40663.1"
                     /translation="MATPRRDVGVRERGLPSVNQAKAEQRRAVVFGRVRLSGVPPHFW
                     LWSLTAIGLFMVVYWRIAEGHLESIKAQVMAKQRAVARAIGPSILPFRDKVEGWTTEL
                     AGPYPGDHVAPGAPYEDIRQSPGVYLRLRLANAKTAKDIRKAARASLHDGFTSCMFLH
                     KDAGDPTQGPACRTTSQCSPGKLCNEWNVCADPPIPYNMRLAYRTLRVLSNDWTDELH
                     GASSELAVSAYDRDLDSVTRYDVRIAAEILARSKYFTLVLDEEPAGGLPKELPDAGET
                     AEERVQRVGHPARVGIWDLSDGHQVLRLRSDASGDFVPMGRRKAQPPEIMAAEARQVN
                     GCTLALAVRAALGHDER"
     gene            complement(6651..7217)
                     /locus_tag="VLJ38_13890"
     CDS             complement(6651..7217)
                     /locus_tag="VLJ38_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSU40664.1"
                     /translation="MSEKALSRFVQPIAVPGRRLLHHIPLAFVRKKVAGGGGRSVNSE
                     IPLIPFIDFLLCIVLFLLASFSASGELPIDKTIKLPNAENVIDMTDAPMCAITGTQIL
                     VDGSPAGSTRVIEEANRLQRVEELFNILKNKRELWKQLNPGKDFPGVIVLQVDRKVQA
                     LVVKSVFQTAAFAGYPNVSFMVGRLGKQ"
     gene            complement(7224..>7600)
                     /locus_tag="VLJ38_13895"
     CDS             complement(7224..>7600)
                     /locus_tag="VLJ38_13895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="biopolymer transporter"
                     /protein_id="HSU40665.1"
                     /translation="KDPPKEKQLHVEMKGDTKFQLVWKEGNTVVNTIDLDRKAVPVGN
                     QGDYRFPDLAKKISDEWNANGAHRAASDAKLDQAVLHTDNSTPFSDVIAVIDAIYTPK
                     RDLTWGGKTEKLPAFNVTFAVN"
BASE COUNT         1409 a         2541 c         2449 g         1201 t
ORIGIN      
        1 acgttgaagt ggatcgagag caagttcggc aagcgttcgg acctcgtggc cgccaacatc
       61 gcggcgctca aggccgggca cgctttcggc gaaacggcgg aggtttttca gcaccgctac
      121 gaagtgccgc ccgcgcccgt cgagaagggc gaatacagga acatcggcgg caacacggcg
      181 accgcgcttg gcctggtagc gggcgcgcag ctcgcgggac tgccgctcgt gctcggcgct
      241 tatccgatca ctccggcaag cgacgtgctg cacgagctca gcaagtacaa gcaattcggc
      301 gtcaccaccg tgcaggccga ggacgagatc gcggccgtgt gcttggcgct cggcgcttcc
      361 tacgccggga acctcggcgt cacgagcacg agcggccccg gcatggcgct caaaatggag
      421 ggcatcgggc ttgcgctctc ggtcgagctc ccgctcgtca tcgtcgatat tcagcgcgga
      481 ggacctagca ccggcttgcc gacgaagacc gagcaggcgg acttgctgca agcggtctac
      541 ggtcgaaaca gcgagggccc ggtgtgtgtc atcgcggcgt ctactcccgg caactgcttt
      601 tcgatggcga tcgaagccgt gcggctcgcg ctcaagtaca tgacgccggt catcttgctc
      661 acggacggct acctcgcgaa cggcgccgaa ccctggaaga tcccgaacgt cgccgagctg
      721 ccgaagatcg acgtgaagtt tcgaaccgat ccggcgggat ttcacccgtt cctgcgcgac
      781 ccggcgacgc tcgcacgcaa ctgggcgatt cccggcacgc ccgagctcat gcatcgcgtc
      841 ggcggcctcg aaaaggacta cgactcgggg cacatctcgt atgcgccgga caaccacgag
      901 cgcatggtca aggcgcgcgc ggcgaagatc gccggcatcg cgagcgacat ccctccgctc
      961 accatggaag tcggagagga cagcggcaag ctcctcgtgc tcggctgggg ttcgacctac
     1021 ggcgcgatcc gcgaagccgt tcagcgctgc cgcgaccgcg ggctgagcgt ctcgcacgct
     1081 cacctccgct acttgaaccc cttcccgcaa aacctcggcg aggtcctgaa gcgcttcgag
     1141 cgcgtgctcg tccccgaact gaacatgggc cagctcgtaa agatgctgcg gagcacttat
     1201 ctcgtccccg ccgaaggcct ctcgaaagtc caaggccaac ccttcaagat caccgagctg
     1261 gaagaaaaaa tccgccaggt actcgaaagt tgagcgcgac gagctcgaag tcttggaaga
     1321 ccagatcacg atcatcacga gcggccgcaa ccccacacga gaaccggcga ggccggcgcc
     1381 cggcccgttt aagcagggcc agttcgaccc gacctctcgt gtcgccccga cctaatccca
     1441 agctccccgg acgccacccc atgtcagacc tgattagccc taccaaactc accaagaaag
     1501 acttcgaaac cgatcaggac ctgcgctggt gcccgggctg cggggactat tcgattctcg
     1561 cgaacgtgca gcgcgtgatg cccgagttcg ggatcgcgcg cgagaacatc gtctgggtga
     1621 gcggcatcgg ctgcagcagc cgcttcccgt actacatgaa cacgtacggg tttcacacga
     1681 tccacggtcg agcacctgcg gtcgcgctcg gcatcaaggt ggccaacccc gagctctcgg
     1741 tctggctcgc cacgggcgac ggggacgggt tgagcatcgg cggcaatcac ctgatgcact
     1801 gcctgcgccg gaacctcgac gtgaagatcc tgatgttcaa caacaggatc tacggcctca
     1861 ccaaggggca gtactcgcct acgagcgagc tcgggaaggt gacgaagagc acgccgtccg
     1921 gctccgtcga tcagcccgtc gatccggcaa gcttcgcgct cggcgtgaac gcgagcttcg
     1981 tggcgcgctc gatcgatacg gaggcgcagc acttgagcga cgtgctgcgc cgcgccgccg
     2041 cgcacgtggg gacggcgttc acggagattt atcagaactg caacgtcttc aacgacggtg
     2101 ccttcgacgc attcacggac aaagccgtcc gcgccgaccg ccaagtgcgc gtcgagcatg
     2161 gcaagcccct cgtcttcggg gcaaacaacg acaagggcct gcgcctgaac cctcgcacgc
     2221 tggggctcga aatcgtcgct gtcggcgacg gcggggtgcc gctctcggac gtgctcgttc
     2281 acgacgagac gaaccccgcc ttcggcctcc tgctcgcccg catgcccttc cccgagttcc
     2341 cggtggccat cggagtgctc cacgcgagcc agcgaccgac ctacgacggc accctaagag
     2401 cccaacaaaa ggccgctcgc gagaagctcg gccagcctga cctcgcaaag ctcttgcgcg
     2461 gcggcagcac ctggaccatc taagcgcccg tcattgcgca tcgctgcgcc cacgacacga
     2521 aaaacgatat gggaactccg caagatccac gcacccgacg ccgccagcgc ctgcgtcgcg
     2581 ccaagaagaa cctcgcctgg gaagccgccc gcgctcacga gaacgcggaa gccgccaagc
     2641 ccaagacgcc cgcgaagaag gcgacttagc cgccttcgcg acttagccgc cttcgcgtcg
     2701 cgcgaatcac ccgctgagca ctcgccccgc gcaagggcaa acgcgaagga gcgtcccctc
     2761 gccgcgcgct ggtcgcgaaa agccgcgcct ccgcgccagc gcgggcgtgg tcgcgccttg
     2821 ggggtcgaca aacggggctg ccgtgctcaa gatttagcct ggcatggcaa cggacaagcc
     2881 gaagacccga cccgacaccc agggtgaact gggcgttcag gagagaccaa aggtcgagcg
     2941 gcctcgtaag tatgtcgtgg tgctccacaa cgacgactac acgacgatgg aattcgtcgt
     3001 gcacgtgctc atgaagtttt tccacctgga cgagaccgag tccacccagg tgatgctgca
     3061 cgtgcatcac cgcggcttcg gcatcgtggg cacgttcacg cgcgacgtgg cggaaaccaa
     3121 ggcggcaagc gtcatggcct acgccaagga gcaccagcac ccgctcaggt gcacggccga
     3181 gccggagggt ttcggggatt cgccatgaaa gtcagcgctg aagtcgaagt tgcctgctcc
     3241 ttcgccctgc gcgaagcggt cgcgcgccgt cacgacgtga tggcggtcga gcacctgctt
     3301 tacgccctac tccacgacga ggccacggcg cgcgtcgtgc gccgctccgg cggcaaagtg
     3361 gacaagctca agcgcgctct cgatcgcatc ctcacggaag agttcaagcc gatttcgggc
     3421 gacgcgccgg tgcagccgac acccacgcgc ggctttcagc gcgtgcttca gcgcgctgcg
     3481 attcacgtgc aatcgagcgg caaagacgag ctcaagggcc aaaacgtgct cgtcgccatc
     3541 ttcgccgaag cggactctcc ggccgtccag gcgatgaacg actcagggct cacgcgctac
     3601 gacgtggcga gcttcatctc gcacggcgtc gccaaagacg gcaccgacga cgacgcgctc
     3661 gaggtgagcc ccggcgcggg cggcagcgag tccgaggacg aagacggcga acctacgggc
     3721 gatccgctcg agcgcttcgc cgtcaatttg aacgagcgcg cggctgccgg tgaaatcgag
     3781 acgctcgtcg ggcgcgagaa agagctccgg cgcgcgattc aggtgttgag ccgccgcaag
     3841 aagaacaacc cactcttcgt gggcgacgcc ggcgtcggca agaccgcgat cgtcgaggga
     3901 ctcgccgatc gcatcgtcaa aaagcaggta ccgaagccgc tgctcgacgc ggtcattttc
     3961 tcgctcgaca tgggcgcgct cgtcgccggc acgcgcttcc gtggcgactt cgaaaaccgc
     4021 gtcaaagccg tgctgaagaa gctcgacgaa cggccgggcg cgatcctgtt cgtcgacgag
     4081 atccacacgg tggtgggcgc gggcgccgcg agcggcggca cgctcgacgc ggccaatctc
     4141 ttgaagccgg cgctctcgag cggaaagctc cgctgcatcg gcgcgacgac cttcgaggag
     4201 taccgcacgc acgtcgagcg cgatcgcgcg cttgcgcgcc gtttccagaa gatcgaagtg
     4261 aacgagccga gcctcgagga gacgatgcag atcctgcggg gactcttgcc gcgctacgcc
     4321 gagttccacg gcgtgacgta cgcgccggac gcggtcgacg cggccgccaa gctcgccgat
     4381 cgacacctgc acgaccgcaa gatgccggac aaggcgatcg acctgatcga cgaggcaggt
     4441 gccgacgcga agctcgagga cggcgacgcc gcgcaggtcg gtgtcgaacg catcgaggcg
     4501 gtggtcgcgc gcatggcgca aattccgccg aagcaggtga gctcgagcga caagagcgct
     4561 ctcttgaacc tcgagcgcga tctcgagctc gtggtcttcg gccaaaaccg cgctctccgc
     4621 gagcttgcca cggcgatcaa gctctcgcgt gcgggactgc gcccgcgcga aaagccgatc
     4681 ggttcgtacc tgttcaccgg ccccacgggc gtcggcaaga ccgaagccgc gcgccagctc
     4741 gccaagacgc tcggcatcga gctcatccgc ttcgacatga gcgagtacat ggagcgccac
     4801 acggtctcgc gcctgatcgg cgcgccgccc ggctacgtcg gctacgaccg cggcggactc
     4861 ttgaccgaag cgatcgcgaa gacgccgcac gccgtgctgc tgctcgacga gatcgagaaa
     4921 gcgcaccccg acgtgttcaa cgtgcttcta caagtgatgg atcacggcac gttgacggac
     4981 aacaacggca agaaagccga tttccggcac gtcgtcctga tcatgacgag caacgtcggc
     5041 gcgcaggatc tcgcgcgcgg cttggtgggc ttcgggaccc gcgacacgcg cggcaaagaa
     5101 gacatcgcgc tccgcaacac gttcagcccg gagttcagaa atcgcctcga tgcgcgcatt
     5161 caattcgacc cgctcgcacc cgaagtgatg gagaaggtcg tcgacaagtt catgaaagag
     5221 ctcggcgatc agctggctga gcgcgaggtg acgctctcgc tcacccccaa ggcacgcacg
     5281 tacctcgccg acaagggcta cgacaaggag cagggcgcgc gccccctcgg ccggctgatc
     5341 caggacgaag tgaagcgtcc gctcggcgat cagctgctct tcggcgatct cgagcacggc
     5401 ggccacgtga cggtcgactt cgacggcaag gccattcgct tcgaggtcca aggccggccg
     5461 ccgaaggccg cgacctcggg cggcccgaag ctcctcaact agcgctcgtc gttttcgagg
     5521 cgaatcgacg cgtcttgggg cgcgcgcgct tcgaagcgcc gagcggacct aacgttcgtc
     5581 gtgtccgagc gcggctcgta cggcgagagc gagcgtgcag ccgttcactt ggcgcgcttc
     5641 ggccgccata atttcgggcg gctgcgcctt gcgtcggccc atgggaacga agtcgcccga
     5701 cgcgtccgaa cgcaagcgca agacttgatg cccgtcggaa aggtcccaga tgcctacacg
     5761 cgcggggtgc cccacgcgct gcacgcgttc ctccgccgtc tcgcccgcgt ccggcagctc
     5821 cttcggcaga cctcccgcag gttcctcgtc gagcacgagc gtgaaatact tcgagcgcgc
     5881 taggatttcc gcggcgattc gcacgtcata acgcgtgacg ctgtcgaggt cgcgatcgta
     5941 cgcgctgacg gcaagctcgc tgcttgcgcc gtgaagctcg tccgtccaat cgttcgagag
     6001 cacgcgcaac gttcggtacg cgagccgcat gttgtacgga atcggcggat cggcgcagac
     6061 gttccactcg ttgcagagct tgcccggcga gcattgggaa gtggtgcgac acgcgggccc
     6121 ctgcgtcgga tcgccggcgt ccttgtgcag gaacatgcag gacgtgaaac cgtcgtgcag
     6181 cgacgcccgc gcggccttgc gtatgtcttt ggccgtcttt gcgttcgcga ggcgaagccg
     6241 caaatagacg ccggggctct ggcggatgtc ttcgtacggc gcgccaggcg ccacgtgatc
     6301 gcccgggtat ggcccggcga gctccgtggt ccagccctcg accttgtcgc ggaacggcaa
     6361 aatcgacggg ccgatcgcgc gggcgacggc gcgctgcttc gccatcacct gcgccttgat
     6421 gctctcgagg tgtccctcgg cgatgcgcca gtagacgacc atgaagagcc cgatggccgt
     6481 gagcgaccag agccagaagt gcgggggcac gccgctcagg cgtacccgac cgaacacgac
     6541 cgcgcggcgc tgctccgcct tggcctggtt gaccgatggc agcccgcgct cgcggacgcc
     6601 gacgtctctg cgcggagtcg ccactccggc tactgccgct tggtgggcac ttactgcttg
     6661 ccgaggcgcc cgaccatgaa gctcacgttc gggtaaccgg cgaaggcagc cgtctgaaac
     6721 acgctcttga cgacgagcgc ctgaaccttg cggtcgacct ggagcacgat cacgcccggg
     6781 aaatccttac cggggttcag ctgcttccag agctcgcgct tgttcttgag gatgttgaag
     6841 agctcttcca cgcgctggag gcggttggct tcttcgatca cgcgggtgct acccgccggc
     6901 gagccgtcca ccaggatctg ggtgccggtg atcgcgcaca tcggcgcgtc cgtcatgtcg
     6961 atgacgttct cggcgttcgg cagcttgatg gtcttgtcga tcggcagctc accgctcgcc
     7021 gagaagctcg cgagcaggaa gagcacgatg caaagcaaga agtcgatgaa ggggatcagc
     7081 gggatctcgg agttgaccga gcgaccgccg ccgccagcga ccttcttgcg cacgaaggcg
     7141 agcggaatgt ggtgcaagag ccggcggccg gggaccgcga tcggctggac gaagcgagag
     7201 agggcttttt ccgacatgga tcctcagttg accgcgaacg tcacgttgaa ggccggcagt
     7261 ttttccgtct tgccgcccca ggtgagatcg cgcttgggcg tgtagatcgc gtcgatgacg
     7321 gcgatcacgt ccgaaaacgg cgtcgagttg tcggtgtgga gcacggcttg gtcgagcttc
     7381 gcgtcgctgg cggcacgatg ggcgccgttg gcgttccact cgtcgctgat cttcttcgcg
     7441 agatcgggga agcgatagtc gccctggttg ccgacgggca ccgccttgcg atcgagatcg
     7501 atcgtgttga cgacggtgtt gccttccttc cacacgagct gaaacttcgt gtcgcccttc
     7561 atctcgacgt ggagctgctt ctccttcggc ggatccttcg
//
LOCUS       DATIML010000806         3183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5082060, whole genome shotgun sequence.
ACCESSION   DATIML010000806 DATIML010000000
VERSION     DATIML010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3183
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5082060"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VLJ38_13900"
     CDS             <1..473
                     /locus_tag="VLJ38_13900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40666.1"
                     /translation="GTGGAAAHATGGTGIGSGGTGSGARAGASSGATGGTPGAAGASG
                     DTSGPPGPTADGSSPYAVVCNESTPCTEAGVTCLGIRLEEGGARFTCSNQCETSADCS
                     DAPSGTDAAAGCVEFTSAKHCVLVCYDAGVESDCPDGMGCYRYTNAPIGYCLWL"
     gene            522..1622
                     /locus_tag="VLJ38_13905"
     CDS             522..1622
                     /locus_tag="VLJ38_13905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40667.1"
                     /translation="MRMPTALRKLGTMLGTAMVLCECMGGGAYGPLGAACPAMTRGDP
                     LAQTYSANARANAKVRAFVAASADLVNVSVAAENLAADACRRMGRDLGVADAQMVVAD
                     PSREEPGGAARAACGAVSARIDGILRAGATVRVDARPPQCQANLDAKAGCDGTCNANV
                     DPGEIIAQCEPARLSGFCQGRCVGQCDGNCQGDCQGQCSAKDASGRCVGRCQGTCNGG
                     CDTTCHARCEGQWQAPQCQGYVRPPSADAECTASCSAKANFEAQCQPGTVNVQVAQNT
                     EEVLRLAATLRANLPDLLKAELGLGKRIVSDARAVVQIGSSLPQTLGDAGAEALACVA
                     AAGSASMNASVRIDVTIQASASVSGRVGANAG"
     gene            1664..>3183
                     /locus_tag="VLJ38_13910"
     CDS             1664..>3183
                     /locus_tag="VLJ38_13910"
                     /inference="COORDINATES: protein motif:HMM:NF016013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF389 domain-containing protein"
                     /protein_id="HSU40668.1"
                     /translation="MRLVGDGVESRAVLVSGMLRREPREAAAYWLKLVVAVGIATLGL
                     VVGSTAVIIGAMLIAPLMTPIVGLAMGLATGSPFLVLRSSGRIVFSVVLVILGAAAIT
                     LLVPIHELNAEISSRASPTVLDLAIAVFCALAGVLASLRPGSDTATTAAGTSISVSLV
                     PPLCASGYGVGTGAWSIAAGAALLFLTNLVAIALVGTCAFVLAGFNRVDVLALERREL
                     AEGDHDSRVARWLAQKLSRLFASRGGPLLRLAMPVLLLATVYLPLRRALDEVAWEVRV
                     RAAVRSAIAAEQPRVLESRLVLDRHQVELGFVVLGTMKESERVRERVKAAVHRASGVV
                     PQLEVRAVPDAAAFAGLESSVLSPKRSDRPLPMPAPSPAEQVERGQALVRAALSKFWP
                     AGAAGAALAVDVSTADDQPLRVRVVHIGQALGASARETLEHALEDELGRPAKLVDVAV
                     PGEELTRAEGDLTFVARLTAAIRATSALPRVSVCVTRPSEAESRALGSTEFTGIID"
BASE COUNT          453 a         1042 c         1175 g          513 t
ORIGIN      
        1 ccgggacggg cggtgccgct gcccacgcga cgggcggaac gggcataggc agcggtggaa
       61 cgggcagcgg cgctcgagcc ggggcgagct ccggcgcgac gggcggaact ccaggcgccg
      121 ctggcgcgag cggtgatacc agcggaccac cgggaccgac cgcggacggc tcgtcgccgt
      181 acgccgtcgt ctgcaacgag agcacgccct gcaccgaggc gggcgtcacg tgcctcggca
      241 tccggctcga ggaaggcggc gcgcgcttca cgtgctcgaa tcagtgcgag acctccgcgg
      301 attgctccga cgcgccctcg ggcacggacg ccgcggccgg gtgcgtggaa ttcacgtcgg
      361 cgaagcattg cgtcctcgtc tgctacgacg cgggtgtcga aagcgactgc ccggatggca
      421 tgggctgcta ccggtacacg aatgcaccga tcgggtactg cctctggttg tgaggcggct
      481 cgcgtggtgc cgccgaaagg gtttatgtat cctccctcgg catgcgaatg cccactgcgc
      541 tgcggaagct cgggacgatg ctcgggactg cgatggtgct ctgcgaatgc atgggcggcg
      601 gcgcgtacgg gccgctcggc gcggcttgtc cggccatgac ccgcggggac ccgctcgctc
      661 agacgtattc ggccaacgcg cgcgccaacg cgaaggttcg agcgttcgtc gccgcgagcg
      721 ccgatctcgt caacgtgtcc gtcgcggcgg agaatctcgc cgccgatgcg tgtcgccgca
      781 tgggccggga tctcggcgtc gctgacgcgc agatggtcgt ggccgatccg tcgcgcgagg
      841 aaccaggcgg agccgcgcgc gcggcgtgcg gcgccgtgag cgcgcgtatc gacgggatct
      901 tgcgcgcggg cgcgaccgtt cgcgtcgacg ctcggccgcc gcaatgtcag gcaaacctgg
      961 acgccaaggc gggttgcgac ggcacgtgca acgccaacgt ggatccaggt gaaatcatcg
     1021 cgcagtgtga gcctgcgcgc ttgagcgggt tttgccaagg ccgctgcgtc gggcaatgtg
     1081 acggcaattg ccagggcgac tgccagggac agtgcagcgc caaggatgcc tcgggtcgct
     1141 gcgtcggccg ctgccagggt acttgcaacg gcggctgcga cacgacgtgc catgcgcgct
     1201 gtgaaggaca atggcaagcg ccacagtgtc agggctacgt ccgcccgccg agcgccgacg
     1261 ccgaatgcac cgcgagctgc agcgcgaaag cgaacttcga ggcgcagtgt cagccgggaa
     1321 ccgtgaacgt tcaggtcgcg cagaacacgg aagaagttct gcgcctcgcg gccacgctgc
     1381 gcgcgaacct gccggacctt ttgaaggcgg agcttggact cggtaagcgt atcgtgagcg
     1441 acgcgcgcgc agtcgttcaa atcggctcga gcttgccgca gacgctcggc gacgccgggg
     1501 cggaagcgct cgcgtgcgtc gccgcggccg gcagcgccag catgaacgcg tcggtgcgca
     1561 tcgacgtgac cattcaggcg agcgcgagcg tgagcgggcg cgtcggggcg aacgcgggtt
     1621 gacgagcgcc gtcacgcctt tcgctcgcgc tcaggaccga ctcatgcgcc tggtgggcga
     1681 cggcgtcgaa agtcgcgccg tactcgtttc cgggatgctg cggcgggaac cgcgtgaggc
     1741 ggcggcgtat tggctgaagc tcgtcgtggc cgtgggaatc gcgacgctcg ggctggtggt
     1801 cgggagcacg gcggtgatca tcggtgcgat gctcattgct ccactgatga cgccgatcgt
     1861 cgggctggcg atgggacttg cgaccgggtc tccatttctc gtgctgcgct cttccgggcg
     1921 catcgtcttc agcgtcgtgc tggtgatctt gggggcagcg gcgatcacgc tgctcgtgcc
     1981 gattcacgag ctcaacgccg agatctcgtc gcgggcttca ccgaccgtcc tcgacctcgc
     2041 catcgcggtg ttctgtgctc tcgccggcgt tctcgcctcg ctccgacccg gctccgacac
     2101 ggcgacgacg gcggcgggga cgtccatcag cgtctcgctc gtcccgccgc tctgcgccag
     2161 cggttacggc gtggggacgg gcgcctggtc gattgcagcg ggcgcggcgc tgcttttttt
     2221 gactaatctg gtcgccatcg cgctcgtcgg gacctgcgcc ttcgtgctgg cgggtttcaa
     2281 tcgcgtcgac gtgctcgcac tcgagcggcg agagctggcg gaaggtgacc atgattcgcg
     2341 cgttgcacgc tggctcgcgc agaagctttc gcgtctgttc gcgtcgcggg gcggtccact
     2401 cctgaggctc gccatgcccg tgttgctgct ggcgacggtg tacttgcccc tgcgccgcgc
     2461 gctcgatgaa gtcgcctggg aggtgcgggt gcgcgccgca gttcggagcg cgatcgcagc
     2521 cgagcagccg cgcgtcctcg agagtcgtct cgtgctcgat cgtcaccaag tcgagctggg
     2581 cttcgtcgtg cttggtacga tgaaagaaag cgagcgggtg cgcgagcgcg tgaaagccgc
     2641 cgtccaccgg gcgtccggtg tcgtgccgca gctggaggtg cgcgcagtgc cggacgcggc
     2701 ggcgttcgcc gggctcgaat cgagcgtgct cagccccaaa cgcagcgacc ggccgctccc
     2761 catgccggcg ccctcgcccg cggagcaagt ggagcgcggc caggcgctcg ttcgcgccgc
     2821 gctgtcgaag ttttggcccg cgggggcggc cggcgccgca ctcgcggtcg acgtgagcac
     2881 ggcggatgat caaccgctgc gtgtgcgtgt cgtccacatc gggcaggcgc tgggggcgag
     2941 tgcgagggaa acgctggagc atgcgctaga ggacgagctc ggccgaccgg cgaagctcgt
     3001 cgacgtagcc gttcccggcg aggagctcac gcgcgcggaa ggcgacctga cgttcgtggc
     3061 ccgtctcacc gcggcaatcc gggcgactag cgcgctaccg cgcgtcagcg tctgcgttac
     3121 tcgtccttca gaagccgaaa gtcgcgcgct cggctcgacc gagttcaccg gcatcatcga
     3181 cca
//
LOCUS       DATIML010000807         3042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1328715, whole genome shotgun sequence.
ACCESSION   DATIML010000807 DATIML010000000
VERSION     DATIML010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3042
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1328715"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..2887
                     /locus_tag="VLJ38_13915"
     CDS             230..2887
                     /locus_tag="VLJ38_13915"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40669.1"
                     /translation="MRSRTALVFALALTFGCGGATSGTRAAARPIGRAAPAGAPAVPP
                     LSPLDQAEALIRTGRYAAAIELVRKGPKLAGADRLRGACLEAEAERRGGNLHEAERTL
                     RAVSADPAAREARLMLGEVLLELGRRAEAREPLLTLIADYNDGKLGEADGHALALVGR
                     AAHLLRSPRDANDAFGEAEAAGDHSSELYLWRAELFLEKHDPGHAEEVLTDALERTPN
                     DADALVAMAEVRLAQALDFVEAERLANVALSVNPKLARAYFVLGGVALRDVELDLARS
                     RIDAGLAARPNDLDLLSLRAAVSFVAGDRATFDADKRAVLALNPERSRFYAIVGEFAD
                     WEHRYDDIVELMREATRLDPDDPVAHTGLGMNLIRAGHDAEGVAELSRSFSLDPFDPR
                     VFNTLELFEKTIPNDYVTVPGARFRIRYEKHDRALLERYVPALLERAWGTFIEHYGFT
                     PKTPIGVELYASRTHFAIRTSGLPETAIQGVCFGHTLASMSPQNESFNLGMTLWHELS
                     HVFHIQLSASRVPRWFTEGLAEYETMLARPEWKREQDPELFELRRAGRLPPVEGLNRA
                     FTRAEQLSDVATAYYASSRLVAMLGEDFGMKALARMLELWAQGKTTADVMQGALGVAP
                     AEIDRKFGANLDAALARYQGKFVANARSGTVDAASALAAREPKSAAHEAALALALLRA
                     GKVDAARAALGRARALDATDPDTRFLTARIALSEAQPEGAIKELRAMLGEGHDGFDVE
                     MLLAQAADATHDEATRMAALTAATQLDPTQTAPLYGLLHAADARGDPDGALALLRQIA
                     ALSEHDAATYRELLRRLVGRGLFAEAVQVGDSAILVDMTGFETHFAFAEALTQTGNKK
                     RARVELESALLCAAEPSRLAEAKRRLAKR"
     gene            complement(2911..>3042)
                     /locus_tag="VLJ38_13920"
     CDS             complement(2911..>3042)
                     /locus_tag="VLJ38_13920"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU40670.1"
                     /translation="EHHGGQMAATARALGLERSHLYKKARALGLRGDKDGEKDGDES"
BASE COUNT          463 a         1064 c         1054 g          461 t
ORIGIN      
        1 tgggatccaa tcgacgcgcc gcccgaatgg ctcatccagg ccacgcaggc cctgctgcgg
       61 tcggcgtggc agcgacgacg tgcgggtcac ccctggccgc gccggctcgc acgctggcgc
      121 ccttcgcccg ctgacgcaga cgcgtgaggg ctcgggacgg caccgtgacg ctgctcaggc
      181 gggggcacca cgggcgtcag cacagccaac cgtggcgtag aatattgcga tgcgaagccg
      241 tacggcgctc gtgttcgcgc ttgcgctgac gttcggctgc ggcggcgcaa cgtcggggac
      301 gcgggcggca gctcgtccga ttgggcgcgc ggcccccgcc ggagccccgg ccgttccgcc
      361 gttgtcaccg ctcgatcagg cagaggcgct gatccgcacg ggtcgttatg cggcggccat
      421 cgagctcgtg cgaaagggcc cgaagcttgc tggcgccgat agactgcgtg gggcgtgtct
      481 cgaggccgaa gccgaacgtc gtggcggtaa tctgcatgag gccgagcgca cgttgcgtgc
      541 cgtcagcgcc gaccccgcag cgcgcgaagc gcggctgatg ctcggtgaag ttttgctcga
      601 gctcggccgg cgtgcggagg cgcgcgagcc gctgctcacg ctgatcgccg actacaacga
      661 cggtaagctc ggcgaggcgg acggccatgc gcttgcgctc gttggccgcg ccgcgcacct
      721 cctacgctcc ccgcgcgacg cgaacgacgc cttcggggaa gccgaagcgg ccggtgacca
      781 ctcgagcgag ctctatctct ggcgcgccga gcttttcctc gagaagcacg accccgggca
      841 cgctgaagaa gtgctcacgg atgcgctcga gcgcacgccg aacgacgccg acgcgctcgt
      901 ggccatggcg gaggtgcggc tggcgcaagc gctcgatttc gtggaagccg agcggctcgc
      961 gaacgtcgcg ctctcggtga acccgaagct cgcgcgtgcg tatttcgtgc tcggaggcgt
     1021 cgcgctccgc gacgtcgagc tcgatctcgc gcggagtcgc atcgacgccg ggctggcggc
     1081 gcggccgaac gatctcgacc tcttgagcct gcgcgccgcc gtgagcttcg tggccgggga
     1141 tcgcgcgacg ttcgacgccg acaagcgtgc ggtgctcgcg ttgaacccgg aacgctcgcg
     1201 tttttatgcg attgtcgggg aatttgccga ctgggagcat cgctacgacg acatcgtcga
     1261 gctcatgcgc gaggcgacgc ggctcgatcc cgatgacccg gtcgcgcaca cggggctcgg
     1321 gatgaacttg atccgcgcgg gccacgacgc cgagggcgtg gccgagctca gccgctcgtt
     1381 ctcgctcgat cccttcgatc cgcgcgtgtt caacacgctc gagctcttcg agaagaccat
     1441 cccgaacgac tacgtcacgg tgccgggagc gcgtttccgg atccgctacg agaaacacga
     1501 tcgcgcgctg ctcgagcgct atgtccccgc cctgctcgag cgcgcctggg gcacgttcat
     1561 cgagcactac ggtttcactc ctaaaacgcc gatcggcgtc gagctttacg cgtcgcgcac
     1621 gcattttgcg atccgcacga gcgggctccc ggagactgca attcaaggcg tttgcttcgg
     1681 gcacacgctc gcatcgatga gcccgcaaaa cgagagcttc aacctcggca tgacgctctg
     1741 gcacgagctc tcgcacgtct ttcacattca gctgtcggcg agtcgcgtgc cgcgctggtt
     1801 caccgagggc ctcgcggagt acgagacgat gctcgctcgc ccggagtgga agcgcgaaca
     1861 ggacccggag cttttcgagc tcagacgcgc ggggcgtctg ccgcccgtgg aagggctgaa
     1921 ccgggcgttc acgcgcgcgg agcaactgag cgacgtcgcc acggcctact acgcgtcgag
     1981 ccgcctggtc gcgatgctcg gcgaggattt cggcatgaag gcgctcgcgc gcatgctcga
     2041 gctttgggcg caaggcaaga cgacggccga cgtcatgcag ggcgcgctcg gcgtagcgcc
     2101 cgcggaaatc gaccggaaat tcggcgccaa cctcgacgcg gcgctcgcgc gctaccaggg
     2161 caaattcgtc gcgaacgcgc ggagcggcac ggtagacgcc gcctcggcgc tcgcggcgcg
     2221 tgaaccgaag agcgcggcgc acgaagcggc gctcgcgctc gcgctcctgc gcgccggcaa
     2281 agtcgacgcg gcccgcgcgg cgctcgggcg cgcccgagcg ctcgacgcga cggacccgga
     2341 cacgcgtttc ctcacggcgc gcatcgcgct ctccgaagcc cagcccgaag gcgccatcaa
     2401 ggaactccgc gccatgctcg gcgaaggtca cgacggcttc gacgtcgaaa tgctgctcgc
     2461 ccaagcggcg gacgcgacgc acgacgaggc gacccgcatg gcggcgctca cggcggcgac
     2521 ccagctcgat cccactcaaa cggcgccgct gtacgggctt ttgcatgccg cggacgcgcg
     2581 cggtgacccg gacggcgcgc tcgcgctgct acgccaaatc gcggcgcttt ccgagcacga
     2641 cgcggcgacg taccgcgagc tcctgcggcg gctcgtcggg cgcgggcttt tcgccgaggc
     2701 cgtccaagtc ggcgactcgg cgattctcgt cgacatgacg ggcttcgaga cgcacttcgc
     2761 gttcgccgaa gcgctcacgc aaacgggcaa caagaagcgc gcgcgcgtcg agctcgagag
     2821 cgcgctgctc tgcgccgccg agccgagccg cctcgcggaa gccaagcggc gtctggccaa
     2881 gcgctagtct ctaatttcgg cccgcaacct tcagctctcg tcgccgtcct tctcgccgtc
     2941 cttgtcgcca cgcaggccga gcgcacgcgc ctttttgtag aggtggctgc gttcgaggcc
     3001 gagcgcgcgc gcggtcgcgg ccatctggcc gccgtggtgc tc
//
LOCUS       DATIML010000808         3202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3635665, whole genome shotgun sequence.
ACCESSION   DATIML010000808 DATIML010000000
VERSION     DATIML010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3202
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3635665"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1720
                     /locus_tag="VLJ38_13925"
     CDS             <1..1720
                     /locus_tag="VLJ38_13925"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HSU40671.1"
                     /translation="GGPFELRVTASAAESTYAGIIRLVEAAERSKAPFVRLADRYALG
                     FLALTLALAAFAWILEGSPRRALAVLVVATPCPLILAAPAAIIAGVSRAARHGIIVKG
                     GGPLETLARVTVLLLDKTGTVTSARPQVVAVETFAGMSSDDVVRHAASVEQVSVHPFA
                     PAILAEARSRKLELSFPTDVREQMGTGIAGAVDGRRVAVGQLVFTDPNAPRTAALRSI
                     ETRTAVEGSSSVYVSVEGKLAGVLLLQDPIRPEAPRALRSLRTAGVQRIHMVTGDHPD
                     VAELVGDALGFDRVFAERTPEEKVEVVKFVRGEGVTAMVGDGINDAPALALADVGIAM
                     GARGATAASEAADIVLTADRLEGLLLATRIAQRTRRIALESVFAGMGLSLVAMSFAAA
                     GYITPVAGAILQEGIDVLVILNALRALGEGRFAAPKRPDVTGLAQGLALAHRSLRPHV
                     GELAALAARLDALAPPAARAELERVRDRLENELLPHEREEQRTAYPLLGKMLGDEDPT
                     GPLIQTHHEIHRLTRLFGRLVVQLPPEGPRPEDLRDLRRALYGLHAILTLHFAQEEEL
                     YSLFEA"
     gene            complement(1757..3007)
                     /locus_tag="VLJ38_13930"
     CDS             complement(1757..3007)
                     /locus_tag="VLJ38_13930"
                     /inference="COORDINATES: protein motif:HMM:NF018434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU40672.1"
                     /translation="MRIALLAHGSRGDIQPLLAVADELGRRGHAVRMTVNTNMVAWAR
                     RTGVDVVPIEPDVEALLKSVGGRTLLATGKLVQLFRLLGEAERTHAKAIMQSCRDAAE
                     GADLVLSSVLTAYRGDCLAERLDVPHGVLSTVPYLATRRWASFVAPRPNLGIGWLNRL
                     SYPLMHAVMWQQAKQGIAEMRTALGLPRRWRRPRVERTRSVQLYGSALVPRPVEWEPQ
                     HQLAGFCGLRPELRSRLGESEVSHDLQTWLDAGPPPVFFGFGRMPILEPARVLGWVSA
                     IAKARGVRALVGAGWSDYGATELPEHVFLAPIFNHDRVLPRCRAAVHHGGAGTTASSL
                     RAGLATAIISVFGDQPFWGWRLTELGAGTTLRFQALTEARLAAAVDEVLKSERRERAQ
                     TLAGEVARENGAVRAAEIVESWAT"
BASE COUNT          512 a         1120 c         1079 g          491 t
ORIGIN      
        1 tggcggccct ttcgagctgc gcgtcaccgc gtcggcggcg gaaagcacgt acgcggggat
       61 cattcgcctc gtcgaggcgg cggaacggtc gaaggctccg ttcgtcagac tcgcggaccg
      121 ctacgcgctc ggcttccttg cgctcacgct cgccttggcc gcgttcgcct ggatcttgga
      181 gggaagcccg aggcgcgcgc tcgccgtgct cgtcgtggcg acgccgtgtc ctctcattct
      241 ggcggcccct gccgcgatca ttgcgggcgt ttcgcgtgcg gcaaggcacg gcatcatcgt
      301 caaaggcggc gggccgctcg aaacccttgc ccgagtcacg gtgctcctgc tcgacaaaac
      361 ggggaccgtg acgtcggctc gcccgcaggt cgtcgcggtc gagacgttcg cgggcatgtc
      421 ttccgacgac gtcgtgcggc acgccgcgtc ggtcgagcag gtctcggtgc atccattcgc
      481 gcccgcgatc ctcgcggagg cgcgcagccg gaagctcgag ctgagcttcc cgacggatgt
      541 ccgcgagcag atgggcacgg gcatcgcggg ggccgtcgac ggcaggcgag tagcggtcgg
      601 ccagctcgtc tttacggatc ccaacgcgcc ccgcactgct gcgctgcgtt cgatcgagac
      661 gcgcacggcg gtcgagggct cgtcgagcgt ctacgtctcc gtcgaaggca agctcgcggg
      721 agtgctcctc cttcaggacc cgattcgtcc cgaggcgccg cgtgctctga gatcgctccg
      781 aacagcgggc gtgcagcgca ttcacatggt gaccggcgac catcctgacg tcgcggagct
      841 cgtcggggac gccctcggct tcgatcgcgt cttcgccgag cgaacacccg aagaaaaagt
      901 cgaagtcgtc aagttcgtcc gcggcgaagg cgtcacggcc atggtcggcg acggcatcaa
      961 cgacgcccca gcgctggcgc tcgccgacgt cggaatcgca atgggcgcgc gcggggccac
     1021 ggcagcctcc gaagcggcgg acatagtcct caccgcggac cggctcgagg gactgctcct
     1081 cgcgacgcga atcgcgcaac gcacgcggcg catcgcgctc gaaagcgtct tcgccggcat
     1141 gggcctttcc ctcgtggcaa tgagcttcgc cgcagccggc tacatcacgc ccgtcgccgg
     1201 ggccattctt caggaaggca tcgacgtgct cgtcatcctc aacgcgttgc gcgccctcgg
     1261 tgagggccgc ttcgcagcac cgaagcggcc ggacgtcacg ggtctcgcgc aggggcttgc
     1321 cttggcgcat cgctcgttgc gcccgcatgt cggcgagcta gcggcgctag cggcgcgtct
     1381 ggatgcactg gcgccgcccg cggcgcgcgc agagctcgag cgagtacgcg ataggctgga
     1441 aaacgagctc ttgcctcacg agcgcgaaga gcaacggacg gcttacccgc tgctcgggaa
     1501 gatgctcggg gacgaggatc cgacaggacc gctcatccag actcatcacg agatccaccg
     1561 gctcacgcgg ctcttcggtc gtctcgtcgt gcagctgcct cccgaagggc cacggccgga
     1621 ggacctgcgt gatctccgcc gcgcgctgta cggcctccac gccatcctga cgctgcactt
     1681 cgctcaggag gaagagctct acagcttgtt cgaggcctga cctctcgtgc actgcgaagg
     1741 ctcaaagtcg atccgcctag gtggcccagc tctcgacgat ctccgccgcg cgcaccgctc
     1801 cgttttcgcg agctacctcg cccgcgagcg tctgtgcccg ttctcgtcgc tcgctcttca
     1861 gcacttcatc gacggccgcc gccaaacgcg cttccgtgag cgcctggaag cgcagcgtgg
     1921 tgccggcacc gagctcggtg agtcgccaac cccagaaggg ctgatcgccg aacaccgaga
     1981 tgatcgcggt ggcaaggccg gcccgcaggg acgacgccgt cgtgcccgcg cctccgtggt
     2041 gaacggcagc gcggcagcgc ggtaggacgc gatcgtggtt gaagatcggc gcgagaaaga
     2101 cgtgctcggg gagctcagtg gcgccgtagt ccgaccaacc cgcgccgacg agcgcacgca
     2161 cgccccttgc cttcgcgatc gcgctcaccc agccgagcac acgcgccggt tcgaggatgg
     2221 gcatgcggcc gaagccgaag aagacgggcg gcgggcccgc atcgagccac gtttgcaggt
     2281 cgtgcgacac ctcgctctcg ccgagacgcg agcggagctc cggccgcagc ccgcaaaagc
     2341 ccgcgagctg atgctgcggc tcccactcca cgggtcgggg gacgagggcc gagccgtaga
     2401 gctggacgct gcgagttcgt tcgacgcgcg gccgccgcca gcggcgtggc agccccaacg
     2461 ccgtccgcat ctcggcaatt ccttgcttcg cctgctgcca catgacggcg tgcatgagcg
     2521 gatagctgag gcgattgagc caaccgatcc cgaggttcgg ccgcggcgcc acgaagctcg
     2581 cccagcggcg cgtggcgagg tagggcacgg tcgagagcac gccgtgcggg acgtcgagcc
     2641 gctccgcaag gcagtcgccg cgatacgccg tgagcacgct cgagaggacg aggtcggcgc
     2701 cttccgccgc gtcgcggcac gattgcatga tcgccttagc gtgcgtgcgc tcggcttcac
     2761 ccaagagccg gaacagctga acgagcttgc ccgtggcgag cagcgtgcga ccgcccacgg
     2821 acttcagtaa tgcttccacg tccggctcga tcggcacgac gtccacgccc gtgcggcggg
     2881 cccacgcgac catgttcgta ttgaccgtca tccttacggc gtgaccacga cgaccgagct
     2941 cgtcggcaac ggccagcagg ggttggatgt caccgcgcga cccatgagca agcaaggcga
     3001 tgcgcatctg gccgttccca acacccttat aacggtaagc tcgcccagag ccaaagctgg
     3061 agaaaggtcg acgggcggtg tgccccgcgt cggaaacgag ccttcagttg agcgcgtcac
     3121 cccagcacgc gagctcaccc gaatcggcga ttgcgcatgc ccggcgcagt ggactcccgg
     3181 tctcgaagaa catcgcgctg at
//
LOCUS       DATIML010000809         3246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2767886, whole genome shotgun sequence.
ACCESSION   DATIML010000809 DATIML010000000
VERSION     DATIML010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2767886"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..971
                     /locus_tag="VLJ38_13935"
     CDS             <1..971
                     /locus_tag="VLJ38_13935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40673.1"
                     /translation="RRDQQPFDVVHGHDWPGGLVGPHLAAGSPPLVLSVYDPRRAPLQ
                     TGLATARIVVTPAPTYGATVTDPAVTGSLAQAFSALPEPPVGITSGVDYAIFNPATDP
                     GLEARYDAEDPSAKARTKGVILRELRLELEISRSLVLFAAPLDRAHGADVVLGALPEL
                     TRLPATFVVAAVGQRGMLAEFQTLAAERPAELACIAAKDDVAVRRLYAAADITLVVPA
                     DAPCETAQLVAQRYGAPPVAYAAGTVVDSVVDCDAALETGTGFVFDSLEPRVLVGAVE
                     RALAAHADEDAWHRLRRRVMRLDLAWDRPARRYAQIYRRASEPPPS"
     gene            complement(938..1780)
                     /locus_tag="VLJ38_13940"
     CDS             complement(938..1780)
                     /locus_tag="VLJ38_13940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40674.1"
                     /translation="MKRRTLAVLFEFACRGAASIVLAGPVCAAVAASGIGAFPEGDRL
                     LFEPGGLLLVEVARASWLWLTPLANASLVTLAVVSVALSVPAALLWVTSADETPAAPS
                     ALFGRAAALVPSLLALEGLAFLGQILALCLGLSGAGSFRSALESPAAGDRWALVPLGC
                     AALVALALGILRDVASAAVVCGAPNARSGLRAGLGALFTAPVTLLTRWARPALAALVV
                     VGAVAGAVGVIDVGRPGSLRVVVVAALHQCVVLALSAFRAGWFTAAARLARAQLGGGS
                     EARR"
     gene            complement(1777..>3246)
                     /locus_tag="VLJ38_13945"
     CDS             complement(1777..>3246)
                     /locus_tag="VLJ38_13945"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HSU40675.1"
                     /translation="TLEFSSKLPSVVLRTGYAGDFHFVAQWFPKLARLEDDGSFAHFP
                     FHAQAEFYADFGDYDVSLDVPANEVVGAVGRRVAVEANGERRVEHYRAESVHDFAWAA
                     WPAFRERTARIDGVDVRLLYPPGYERSADRTRAALAFALPRASALYGAYPYPTLTVVH
                     PPERAGETGGMEYPTLIATGGPWYAGFFGDRAIESVTIHELLHEWFYGLVASNEARSP
                     FLDEGLTSYAELRTLDAAYGSGSAFSGFGLTLSVTSLGRAFAAALGEDVAVASPAAAF
                     PSFRTLGALVYSRTATLLETLARVYGRDRVEAALGAYARRYRFAHPTESDFLHAMGDA
                     LGPSVEHTLVQALDERGRVNFLVREVQSAPERPPAGVFDRASGRETVPAASAKARRYR
                     GRAVILRHGELEFPVDIDVFDTAGRRERRHWDGHGPFYVVDFRGDAPLARVVIDPEHR
                     VLLDDDLLDNAAAAEPEPPRRVFERATYVSELLLASFLP"
BASE COUNT          534 a         1134 c         1158 g          420 t
ORIGIN      
        1 agcgacgaga ccaacagccg ttcgacgtcg tgcacggcca cgactggccc ggtgggctcg
       61 tcgggccgca cctcgccgcg ggctccccgc cgctcgtgtt gtccgtctac gatccacgac
      121 gcgcgccgct ccagacggga ctcgcgacgg cgcggatcgt ggtcacgccg gcgccgacct
      181 acggcgcgac cgtcacggat cccgccgtca ccggttcgct cgcccaagcg ttctcggcgc
      241 tgcccgaacc tcccgtcggc atcacgagcg gcgtggacta cgcgattttc aaccccgcga
      301 ccgatccggg cctcgaggcg cgttacgacg cggaggatcc ctcggcgaag gcacggacga
      361 agggcgtcat cttgcgcgag ctacggctcg agctcgagat ttccaggtcg ctcgtcttgt
      421 ttgccgcgcc gctcgatcgc gcgcacggcg cggacgtagt gctcggggcg ctgccggagc
      481 tcacgcgact gccggcgacg ttcgtcgtgg cggccgtcgg acagcgcggg atgctcgcgg
      541 aatttcagac gctcgccgca gagcgacccg ccgagctcgc gtgcatcgcg gccaaggacg
      601 acgtcgccgt gcggcgactc tacgctgctg ccgacatcac gctcgtcgtg ccagcggacg
      661 cgccatgcga gacggcgcag ctcgtcgccc aacgttacgg agctccgccc gtcgcctacg
      721 ccgcgggcac cgtggtcgac agcgtcgtcg attgtgacgc ggcgctcgaa acggggacgg
      781 ggttcgtgtt cgactcgctc gagccgcgcg tgctcgtggg ggcagtcgag cgtgcgctgg
      841 ccgctcacgc cgacgaagac gcctggcatc gcctgcggcg tcgcgtgatg cgcctcgatc
      901 tggcgtggga tcgtcccgca cggcgttacg cgcagattta ccgtcgcgct tccgagcccc
      961 cgccgagctg agcgcgcgcg aggcgcgccg ctgccgtgaa ccagccggcg cgaaacgcgg
     1021 acagggcgag cacgacgcac tgatgcagcg cggcgaccac gacgacgcgc agcgaccccg
     1081 gccgtccgac atcgatcacg ccgaccgcgc cggccaccgc gccgacgacg acgagcgctg
     1141 cgagcgccgg cctcgcccag cgcgtgagaa gcgtgacggg cgcagtgaag agggcaccga
     1201 gccctgcgcg caggccggaa cgagcgttcg gcgcaccgca gacgacggcg gcgctcgcta
     1261 cgtcgcgcaa gatgcccaag gcgagcgcca cgagggctgc gcagccgagc ggcacgagtg
     1321 cccagcgatc gccggctgct ggactttcga gggcgcttcg gaacgaaccg gcgccggaaa
     1381 ggcccaagca gagggcgaga atttggccga ggaaagcaag gccctcgagc gcgagcaatg
     1441 acggcacgag cgcggcggcg cggccgaaga gtgcggatgg ggcagcgggc gtttcgtcgg
     1501 cgctcgtcac ccagagcagt gcagcgggta cgctgagcgc gacggagacg acggctagcg
     1561 tcacgagcga agcgttcgcg agcggcgtga gccagagcca ggaggcgcgc gctacctcga
     1621 cgagtaacaa gccgcccggc tcgaagagca aacggtcgcc ctctggaaac gctccaatcc
     1681 cgctcgccgc gaccgcggcg cacaccggac ccgcgagcac gatgctcgcc gcgccgcggc
     1741 aggcgaactc gaacagcacg gctagcgttc ggcgtttcac ggcaaaaacg acgcgagcaa
     1801 aagctcggag acatacgtcg cgcgctcgaa tacgcgacgg ggcggctcgg gttcggcggc
     1861 ggccgcgttg tcgagcagat cgtcgtcgag cagcacgcgg tgctcggggt cgatgaccac
     1921 gcgcgcgagc ggcgcgtcgc cgcgaaagtc cacgacgtag aatgggccgt gcccgtccca
     1981 gtgccggcgc tcgcggcggc ccgccgtatc gaacacatcg atgtcgacgg ggaattcgag
     2041 ctcgccgtga cgcaaaatca cggcgcgccc gcggtaacgc cgcgctttgg cgctcgctgc
     2101 cggcaccgtc tcccggccgc tcgcgcgatc gaagaccccc gcgggtggcc gctcgggggc
     2161 gctttggacc tcacgtacga ggaagttcac gcgcccgcgc tcatccagcg cttgcacgag
     2221 cgtgtgttcg acgcttggtc cgagcgcgtc gcccatggcg tggagaaagt cgctctcggt
     2281 cggatgcgcg aagcgatagc gccgcgcata cgcgccgagc gccgcctcga cgcggtcgcg
     2341 accgtacacg cgtgcgagcg tctcgagcag cgtcgccgtg cgcgagtaaa cgagagcgcc
     2401 gagcgtgcga aagctcggga aggcagcggc cgggctcgcg accgctacgt cctcgccgag
     2461 cgcggccgcg aacgcgcgcc cgaggctcgt gacggacagc gtgaggccga agccggaaaa
     2521 cgccgaaccg gagccgtatg ccgcgtcgag cgtgcggagc tcggcgtagc tcgtgaggcc
     2581 ttcgtcgagg aacggcgagc gcgcctcgtt cgaggcgacg agcccgtaaa accattcatg
     2641 caaaagctcg tggatcgtga cggattcgat cgcgcgatcg ccgaagaacc cagcgtacca
     2701 gggcccgccc gtcgcgatga gcgtcgggta ctccatgccg ccggtctcgc ccgcgcgctc
     2761 cggtgggtgg acgacggtga gcgtcgggta ggggtaggcg ccgtaaagcg cggaagctcg
     2821 cggcagcgcg aacgcgagcg cggctcgcgt gcggtccgcg cttcgctcgt agcccggcgg
     2881 ataaagcaga cgcacgtcga cgccgtcgat gcgagccgtg cgttcgcgga acgcgggcca
     2941 cgccgcccat gcgaagtcgt gcacgctctc ggcgcggtag tgttcgacgc gccgctcgcc
     3001 gttcgcttcc accgcgacgc gccgcccgac agcgccgacg acctcgttcg ccggcacgtc
     3061 gaggctcacg tcgtaatcgc cgaaatcagc gtagaattca gcctgggcgt gaaaggggaa
     3121 atgcgcaaag cttccgtcgt cctcgagccg cgctagcttt ggaaaccact gcgcgacgaa
     3181 gtggaagtcg cccgcgtagc ccgtgcgcaa aaccacgctc ggcagcttcg agctgaactc
     3241 gagcgt
//
LOCUS       DATIML010000810         2974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4501110, whole genome shotgun sequence.
ACCESSION   DATIML010000810 DATIML010000000
VERSION     DATIML010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4501110"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2794
                     /locus_tag="VLJ38_13950"
     CDS             <1..2794
                     /locus_tag="VLJ38_13950"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSU40676.1"
                     /translation="REIEKTGNEHFLFVLGQVQTLVHLVLGDWDAAEVANRAVAARIA
                     VGNGSFPVPDYYLFAGLLLCRRARSATDEARAELVVGIAEHVAALATFAAVCAPNFAH
                     KHKLLLAELARVERAPTEEVMALYAEALAAAGDDFLHLRALAFELQAELWSEKEQPQL
                     ARECLLEAYHLYRHWGARAKVARLEAAHRAWFERANLPRSAARGIVLDTMVTATVTSG
                     VEGSSLDVQSAIKATHAISSEVKAERLFSLLVQTMIENAGAEHGYLIVKADGSDELSV
                     AAQASVAENPACGELPLPLDRFEPIAHELVRYVARTHETIVLDDAREDELYKNDAHVV
                     AEGVQSVLCMPIVHQGTLKAILYVENSALSRAFTPARVSLLRVIAGQAAISIANADLY
                     EHLEQKVEERTRELAERNREVTAMLNSLEQGVFTIDERLAIEPRYSAHLEALLGGGAL
                     AGRDCIDALFAGAELEKAALDNMRAALTFSFGASPVFAEANRSHWVREFERRTPDGER
                     RHFELDWTPIADGDDSVCKILVAVRDVTLVKALSAKAAEHARELEIVGQVLDASVEQF
                     RRLTLSARRALAHGRERIEREPPSAAVAGELFRHLHTLKGNARMLGLTYLAQTVHTAE
                     EPFDARFAAQAPELRRAELLAAIDTVLASIDEYESVCRQKLGEVLEPARRDGEALERG
                     VTRQLELVKAGSLDANAALAAIEALLERAGAVSFAAIVKSSARVLPALAEETGKVAPA
                     VELEEPGLTLPCDVADALGDALIHAFTNALDHGLETAEERSRRGKPAQGKIRVNATRT
                     ALGTSISIRDDGRGLAVDALRERGTPADSDEIAAERIFAAGVSTARSITASSGRGVGL
                     DAVRALLRRLGGDAHAVFTGPLTGGHRPFELVLELPPEDARPSRSMPPRGSDLPPRPS
                     RPSNAPRRSWPPPGAS"
     gene            complement(2828..>2974)
                     /locus_tag="VLJ38_13955"
     CDS             complement(2828..>2974)
                     /locus_tag="VLJ38_13955"
                     /inference="COORDINATES: protein motif:HMM:NF017353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HSU40677.1"
                     /translation="AGERAQGKGEELTGAVKNRVGAVLGNERMQAEGKVKELKGQARQ
                     NANR"
BASE COUNT          468 a         1062 c          992 g          452 t
ORIGIN      
        1 gcgcgaaatc gagaagaccg gcaacgagca ttttctgttc gtgctcggtc aggtgcaaac
       61 gttggtgcat ctcgtgctcg gcgattggga cgccgcggag gtcgccaatc gcgcagtcgc
      121 cgcgcgcatc gcggtcggca acgggtcctt ccccgtgccg gactactacc tgttcgccgg
      181 tctcttgctc tgccgccgcg cgcggagcgc cacggacgaa gcccgcgccg agctcgtcgt
      241 cgggatcgca gagcacgttg cggcgctcgc gacgttcgcc gcggtgtgcg caccgaattt
      301 cgcgcacaag cacaagctcc tcttggccga gctcgcgcgc gtcgagcgcg caccgaccga
      361 ggaggtcatg gcgctctacg ccgaggcgct cgcagcggcc ggcgacgatt tcctgcacct
      421 gcgcgcgctc gcgttcgagc tccaagccga gctctggagc gaaaaggagc agcctcaact
      481 cgcgcgcgag tgcctgctcg aggcgtatca cctctatcgt cactggggcg ctcgcgcgaa
      541 ggtcgcgcgg ctcgaagcgg cccaccgcgc ctggttcgag cgggcgaacc tgccgcgctc
      601 ggcggcgcgc ggcatcgtgc tcgacacgat ggtgaccgcg acggtgacga gcggcgtcga
      661 aggctcgagc ctcgacgtcc aatccgccat caaggcgacc cacgccatct cgagcgaggt
      721 caaagcggag cgcctgttct ccttgctcgt gcagacgatg atcgagaacg cgggcgccga
      781 gcacggctac ctgatcgtca aggcggacgg ctcggacgag ctcagcgtgg cggctcaggc
      841 gtccgtcgcc gaaaaccctg cgtgcgggga gctcccgctg ccgctcgatc gtttcgaacc
      901 gatcgcgcac gagctcgtgc gttacgtggc gcgcacgcac gaaaccatcg tgctcgacga
      961 cgctcgcgag gacgagcttt acaagaacga cgcgcatgtc gtcgccgaag gcgtgcagtc
     1021 ggtcttgtgc atgcccatcg tgcaccaagg cacgctcaaa gcgatcctct acgtcgagaa
     1081 cagcgccttg agccgcgcct tcacgcccgc gcgtgtcagt ctcttgcgcg tgatcgccgg
     1141 acaagccgcg atttcgatcg ccaacgccga cctttacgag cacctcgagc agaaggtaga
     1201 ggagcggaca cgcgagctcg ccgagcgcaa ccgcgaagtg acggcgatgt tgaacagcct
     1261 cgagcaaggc gtgttcacga tcgacgagcg gctcgcgatc gagccgcgct actccgcgca
     1321 cctcgaggcg ctgctcggcg ggggcgcgct cgccgggcgc gattgcatcg acgcgctgtt
     1381 cgccggtgcg gagctcgaaa aggcggcact cgacaacatg cgcgcggcgc tcacgttcag
     1441 tttcggcgcc tcgcccgtgt tcgcggaggc gaaccgctcg cattgggtgc gcgagttcga
     1501 gcgtcgcacg ccggacggcg agcggcgaca tttcgagctc gattggacgc caatcgccga
     1561 cggcgacgac agcgtctgca aaatcctcgt cgccgtgcgg gacgtgacgc tcgtcaaagc
     1621 cctgagcgcc aaagccgccg agcacgcccg cgagctcgag atcgtcggtc aggtgctcga
     1681 cgcctcggtg gagcaattcc gacgcctcac gctgtcggcc cgccgcgcgc tcgcgcatgg
     1741 acgcgagcgc atcgaacgcg agccgccgtc cgccgccgtc gcgggcgagc tgttccggca
     1801 cctgcacaca ctgaagggca acgcgcgcat gctcggcctc acgtatctcg cgcagaccgt
     1861 gcacactgcc gaggagccgt tcgacgcgcg cttcgccgcg caagcgcccg agctacgccg
     1921 cgcggagctg ctcgccgcca tcgacaccgt actcgcgagc atcgacgaat acgagagcgt
     1981 ttgccgtcaa aagctcggtg aggtgctcga gcccgcgcgg cgtgacggcg aagcgctcga
     2041 acgcggtgtc acacgtcaac tcgagctcgt caaagccggc tcgctcgacg cgaacgcggc
     2101 gctcgccgcc atcgaagcgc tgctggaacg agcgggcgcg gtgtcgttcg ccgcgatcgt
     2161 caagagctcg gcgcgcgtgc tccccgcgct cgccgaggag acgggcaagg tcgctcccgc
     2221 cgtcgagctc gaggagcctg ggctcacgtt accttgcgac gtcgccgacg cgctcggcga
     2281 cgcgctgatt cacgccttca ccaacgcgct cgaccacggc ctcgagacgg ccgaggagcg
     2341 ttcgcggcgc ggcaagccgg cacaaggcaa aatccgcgtg aacgccacgc gcacggcgct
     2401 cggcacgagc atcagtatcc gtgacgacgg ccgcggcctc gccgtcgatg cgttgcgcga
     2461 acgcggcacg ccggcggact ccgatgaaat tgccgcggag cgcatctttg ccgctggtgt
     2521 ttccacggcg aggagcatca ccgcgagctc gggacggggc gtcggtctcg acgcggtccg
     2581 cgcgcttctg cgtcgcctcg gcggcgatgc gcacgccgtt ttcacggggc cgctgaccgg
     2641 cgggcaccgt ccgttcgagc tcgtgctcga actcccgccg gaggacgcgc gcccttcacg
     2701 cagcatgccc ccgcgcggca gcgacttacc gccgcgaccg tcccgtccgt ctaacgctcc
     2761 acgccgctcg tggccgccgc caggcgcaag ttagcgtccc gcgcgaccac gagcgccaaa
     2821 gtgcgggtca gcggttcgcg ttctgacgcg cttggccctt gagctctttg accttgcctt
     2881 cggcctgcat gcgctcgttg ccgagcaccg cgccgacgcg attcttgacg gcgccggtca
     2941 gctcttcgcc tttaccctgc gcgcgttcac ccgc
//
LOCUS       DATIML010000811         2928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5083461, whole genome shotgun sequence.
ACCESSION   DATIML010000811 DATIML010000000
VERSION     DATIML010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2928
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5083461"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2025)
                     /locus_tag="VLJ38_13960"
     CDS             complement(<1..2025)
                     /locus_tag="VLJ38_13960"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HSU40678.1"
                     /translation="MRLDAVLIVAVAAVAGQTAAVAPLAALCAAAGVLVVLAPGLERH
                     VAFVAILAFGASAWRARAALERFELERVRVRDAIGAPSRCAGEGVVVSSPTQSGDALT
                     FVAELGTLDCEGRRVPGPVLARLHGGAPDLGRGDRFELVAQLAPVQLFRNAAAHDTLP
                     GAARRGVTLSGAALALDVTARAHGVRRTIDRVRTHARARILATFSSAAAGMARALVLG
                     ENDLEPEDDAAFRKSGLSHMLAVSGTHLVFAVVSVVGAFAAFFVRFEALALAFEARRL
                     ACFLGVPLALVYADFAGGSGSAWRAAWMLAFGFFVRAVGRAPDGARALAVSLAIGVAR
                     DSLVAFDISFLLSAAATVGLFTFGRALTRPLARLPKVARYIGHAVAATIAAMLPCAPL
                     LAVLAPELTLAGVLANVIAAPFGETIALPFCLTHVLLAPFPPLERGAALVASGALLVV
                     KHVARESAAATWLSVSVPDPTPWHFALLAFGAASLVVHAPAGAGFTRGSEPAWPRVWR
                     RVCAAGLALSVLLLELGAKRGGRSLGILRVTALDVGQGDANLIELPDGAAWLVDAGGM
                     VGNPVDTGATVVLPVLRQKRRTRLDVMVLTHPHPDHFAGLPAVLREIEVGELWDSGQG
                     EAEGAGPSYAALLASARARHVPVRRPAELCGHPRRYGAATIELLAPCPGFV"
     gene            complement(2192..>2928)
                     /locus_tag="VLJ38_13965"
     CDS             complement(2192..>2928)
                     /locus_tag="VLJ38_13965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40679.1"
                     /translation="TLGGTMRFGSLSLLLALGSAGLAACGGGGSLAPTDSHPNEGSYQ
                     SVPSIDALPASINPTTYTPPPGSYDAPPGQENAGGIDVGATLESVCAELCSDVLGLGC
                     TVTGDSFASDPGKGENTDPNTPSAPANTLAVPAECASACVQAEAKEACPNELASAFAC
                     VLDHVVLTCDLLKDTSDQAHFDQQLAVSCQTALLAYTACHDAQPRAQEPPPQDSCTPN
                     SCARCPGACERCKCQHDGDASACTMC"
BASE COUNT          504 a         1048 c         1047 g          329 t
ORIGIN      
        1 cacgaacccg gggcacggag ccaagagctc gatcgtggcg gctccgtagc ggcgcgggtg
       61 cccgcaaagc tcggcgggac gccgcacggg cacgtggcgc gcgcgtgccg aggccagcag
      121 cgccgcatag ctcggccccg cgccctcggc ctcaccctgc ccgctgtccc agagctcccc
      181 cacctcgatt tcacgcagca ccgccggcaa tccggcgaaa tgatcggggt gcggatgcgt
      241 gagcaccatc acgtcgagac gcgtccgacg cttttgccgc aacaccggga gcacgacggt
      301 cgcccctgta tccacggggt tgccgaccat gccgcccgca tcgacgagcc acgccgctcc
      361 gtccggcaat tcgatcaaat tcgcgtcacc ttggcccacg tcgagggccg tcacccgcag
      421 gatcccgagg ctccgcccgc cgcgctttgc gccgagctcg agtaagagca ctgaaagggc
      481 gagccctgcg gcgcacacgc gacgccaaac gcgtggccac gccggctcgc tgccgcgggt
      541 gaaaccagcc ccagcgggtg cgtgcaccac gagcgacgcc gcgccgaacg caagcagcgc
      601 gaagtgccac ggcgtcggat cgggcacgga cacgctgagc cacgtcgccg ccgcactctc
      661 gcgcgccacg tgcttcacga cgagcagcgc ccccgaggcc acgagcgccg cgccgcgctc
      721 gagcggcgga aacggcgcga gcagcacgtg cgtcaggcaa aagggcaacg cgatcgtctc
      781 accgaacggc gccgcgatca cgttggcgag cacgccggcc aacgtgagct cgggcgcgag
      841 cacggcgagg agcggcgcgc agggcagcat ggccgcaatc gtcgcggcga ccgcgtgccc
      901 gatatagcgc gctactttcg gcagccgcgc gagcggccgc gtgagcgcgc ggccgaacgt
      961 gaagagtccc accgtggccg cggccgagag caagaacgaa atgtcgaagg caacgagcga
     1021 gtcacgcgcg accccgatcg cgagcgagac ggcgagcgcg cgggccccgt ccggagcgcg
     1081 acccacggcg cgcacgaaga agccgaacgc gagcatccac gccgcgcgcc aagccgaccc
     1141 gctgccgccc gcaaaatccg cgtaaacgag cgcgagcggc acgccgagaa agcacgccag
     1201 gcggcgcgcc tcgaacgcca gcgcgagcgc ctcgaaccga acgaagaacg cagcaaacgc
     1261 gccgacgaca ctgacgaccg cgaacacgag gtgcgtcccg ctcacggcga gcatgtgcga
     1321 gagcccgctc ttgcgaaacg ccgcgtcgtc ctcgggctcg aggtcgtttt cacccagcac
     1381 gagcgcgcgc gccatgcccg cggccgcgga cgagaacgtc gcgaggatgc gagcccgagc
     1441 gtgcgttcgc acgcggtcga tcgtgcggcg cacgccgtgg gcgcgcgcgg tcacgtcgag
     1501 cgcgagcgcc gcgccgctca gcgtgacgcc gcgccgcgcg gcgccaggca gcgtgtcgtg
     1561 agcggcggcg ttccgaaaga gctgcacggg cgcgagctgt gcgacgagct cgaagcggtc
     1621 gccgcggccg agatcgggcg cgccgccgtg gaggcgcgcg agcacggggc cgggcacgcg
     1681 ccggccctcg cagtcgagcg tgccgagctc ggcgacgaac gtgagggcgt cgccactttg
     1741 cgtgggtgag ctgacgacga cgccttcacc cgcgcagcgt gacggcgcgc cgatggcgtc
     1801 gcggacgcgc acgcgctcga gttcgaagcg ctcgagtgcc gcgcgggcgc gccacgcgga
     1861 agccccgaat gccaggatcg caacgaaggc gacgtggcgc tcgagccccg gagcgagcac
     1921 gacgagcacc ccggcggccg cacacagcgc ggccagcggc gcgaccgccg ccgtttggcc
     1981 ggcgacggca gccacggcaa cgatgaggac ggcatcgaga cgcacgtgcg gcgccggagc
     2041 aggtgtcgtg ccacgcgcgc cgtagcgacc cccaaccaaa aaaggccgag ctctgccgcg
     2101 aaatcgcgca actcacggcg ccgcgctgaa ctctacgccg cgtcggccgc ggcttggccg
     2161 gcggccgcca cgcacgtgaa cgggcgcgct actaacacat cgtgcaggcg ctggcgtcgc
     2221 cgtcatgctg gcacttgcaa cgctcgcacg cgccgggaca gcgcgcgcag gagttcggcg
     2281 tgcaggagtc ctgcggcgga ggttcttgtg ctcgaggctg ggcgtcgtga caggccgtgt
     2341 acgcgagcaa cgcagtctga cagctcacgg cgagctgctg gtcgaagtgc gcctgatccg
     2401 aggtgtcctt caagagatca caggtgagca cgacatggtc gaggacacag gcaaaggccg
     2461 aggcgagctc gttcgggcaa gcctcctttg cttccgcttg cacgcacgca ctcgcgcatt
     2521 cggcaggaac ggccagcgta ttcgcgggcg ccgagggcgt gtttgggtcg gtgttctcgc
     2581 ctttgcccgg atccgacgca aagctatcgc ccgtgacggt gcagccgagt ccgagcacgt
     2641 cactgcagag ctcggcgcag accgactcga gcgtcgcgcc gacgtcgatg ccacccgcgt
     2701 tctcttgacc gggcggggcg tcgtagctgc cgggcggggg cgtgtaggtg gtcggattga
     2761 tggaagccgg cagcgcgtcg atgctcggca ccgactggta acttccttcg ttcgggtgcg
     2821 agtcggttgg agcgagcgaa ccgccaccgc cgcacgccgc gagccccgcc gagccgagcg
     2881 ccaaaagaag cgagagagag ccgaagcgca tggtgcctcc taatgtcc
//
LOCUS       DATIML010000812         5152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2190449, whole genome shotgun sequence.
ACCESSION   DATIML010000812 DATIML010000000
VERSION     DATIML010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5152
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2190449"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1699)
                     /locus_tag="VLJ38_13970"
     CDS             complement(<1..1699)
                     /locus_tag="VLJ38_13970"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     family protein"
                     /protein_id="HSU40680.1"
                     /translation="MIERVAVTGIGAVSALGTGADATFDAVIAGRRGFGAVTLFDTAD
                     ARCRIAAEVHALDPELVASPEEAADFSRTDSMALVAAAEALARAGARDGRLGVILGGT
                     TGGMFETEQALLAGPLDRIDPRRAARLLSHPLDLTTERIARLAGGAHRRSTLCAACSS
                     SALAIAQGLAWLRAGSVDCVLAGGADGLCRLTFFGFDALGALDNEPCRPFDGRRRGLG
                     LGEGAAFLCLEREGAARARGAEILGFLSGAAAGAEAHHITHPEPSGAHAAELLLRALA
                     TAGLEPSDIDYVNAHGTGTVQNDAMEARALHAALGEAAARVLVSSTKGHVGHTLGAAG
                     ALEAVITVLAIHRGIVPATAGLETPEDPTLCHVVGAARRAPLRAAASCSFGFGGTGAV
                     LVFESATTPLRIRSDARVERVVVTGIAGVGPAGELTSGNVEHLLDAAASTPGGRLDPG
                     PIKLLDPERSRRFDTNAALVTQLAGQALARAGVGPSGVGVVAGTAFGSVERSVRFILR
                     AAERGVRRANPAEFPQLVASAASGNASIYLGLTGAALGVSDGATSAETAVATAVDALR
                     "
     gene            complement(1728..1985)
                     /locus_tag="VLJ38_13975"
     CDS             complement(1728..1985)
                     /locus_tag="VLJ38_13975"
                     /inference="COORDINATES: protein motif:HMM:NF006617.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HSU40681.1"
                     /translation="MDSAALKSEIKRLLIEALDLRHKTEAEIDDDAPLFGEGLKLDSL
                     DALQLAVALEERYGIEIPDDAEGRRVFASVSAIAAYVSSRR"
     gene            complement(1999..3012)
                     /locus_tag="VLJ38_13980"
     CDS             complement(1999..3012)
                     /locus_tag="VLJ38_13980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU40682.1"
                     /translation="MAALSPVVGGDALLLERSADACRRLRAQIGRVVVGHEAVVDLLL
                     VTLLARGHALLVGVPGLAKTLLVSSIAEALDLAFGRVQFTPDLLPADITGTDVLSDSE
                     EDGRIRQRIGFQPGPIFKNLVLADEVNRTPPKTQAALLQAMQERCVTVGGVTHPLPDP
                     FQVFATRNPIEQEGTYPLPEAQLDRFLLEIHVEYPSVDEEREIARRTTSGPAASIEPV
                     VRVDELREMGALVPRVPVTDAAVDFAVRLARLSRPGETGVPQEVSDYVRFGAGPRGSQ
                     ALVLAAKARAVVRGEPAADVEDVAAVALPALRHRLVLSYRADVDGVGSSEVVRAVLRR
                     AGG"
     gene            3043..3231
                     /locus_tag="VLJ38_13985"
     CDS             3043..3231
                     /locus_tag="VLJ38_13985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40683.1"
                     /translation="MREAGPPPLAPSGREGVVERPPPGMARGIFAVSPLVVTLVTALL
                     LLLSVGYYTLRLLKIRRR"
     gene            3228..4208
                     /locus_tag="VLJ38_13990"
     CDS             3228..4208
                     /locus_tag="VLJ38_13990"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSU40684.1"
                     /translation="MNRFLRRILGALLLGVLVYGAFVLYTGFHRIQESLARFHWGSFA
                     LALALASSNYFIRFAKWQYYLSRLGVRGVAWLDSLLVFLSGFVLTITPGKVGEVFKSA
                     VLARTHDVPAERTAPIVVAERLTDAIGVIALIVVGSGAFAGGLTWAIAGTAAVAVGVG
                     FIVWEHPGRLLIAWLERQSGGLGRLGPKVRVALTSLRVVAGPAALIWPTLLSLAAWAC
                     EGVALFVLLRGFGAPVPLGVAVFFYSTATLAGALIPVPGGLGVAETMIQEQLVQLGHV
                     PAGDATAAMILIRFATLWWAVLVGFMALAILRLRFPDRLAGDAGSVRVDT"
     gene            4249..>5152
                     /locus_tag="VLJ38_13995"
     CDS             4249..>5152
                     /locus_tag="VLJ38_13995"
                     /inference="COORDINATES: protein motif:HMM:NF024906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40685.1"
                     /translation="MLRPLLLLACGFAFGTATLGCGGATNGTKAAADPSAAPSGDAIG
                     AEHDADLAGAQGRTEELTDATSLEHLKQRLARASLSGVRLNLAARSFGPELGGVLAGA
                     ATLDGLVALDVSDNGLGAVGVEALVGSPHLATLRQLDLGGNDIDDRGVLAVARSGRFP
                     ALKVLNLSGNGIGLDGVRALAASPVLEGVRSLDLSMNPIGPDGARALAASPHLANLHS
                     LFLLGCDIGPGGAAALSGASGLRGLAVLALSGNGIADAGARALAEAATLGTLETLDVS
                     ANGIADDGARALAASPHLARVRSLE"
BASE COUNT          739 a         1864 c         1768 g          781 t
ORIGIN      
        1 atcggagggc atcgacggcc gtcgcgacgg cggtttcggc gctcgtcgct ccgtcggaca
       61 cgccgagggc tgcgcccgtg agcccgaggt aaatcgaggc gttgcccgac gccgccgaag
      121 cgaccagctg cggaaactcc gcggggttgg cgcgccgcac accgcgttcg gccgcgcgca
      181 ggatgaagcg caccgagcgt tcgacggagc cgaacgccgt gcccgcgacg actccgacgc
      241 cgctcggccc cacccctgcg cgcgctaacg cttgccctgc caattgcgtg acgagcgcgg
      301 cgttcgtgtc gaaacggcgc gaacgctccg gatcgagcag cttgatgggg ccggggtcaa
      361 gccgtccccc gggggtgctc gccgccgcgt cgaggaggtg ttcgacgttg cccgacgtaa
      421 gttccccagc cggaccgacg ccggcgatgc ccgtgacgac gacgcgctcg acacgcgcat
      481 ccgaacgaat ccggagcggc gtggtcgccg actcgaacac gagcacggcg ccggtgccgc
      541 cgaacccgaa cgaacacgac gctgcggcgc ggagcggcgc gcgccgcgcc gccccgacca
      601 cgtgacagag tgtgggatcc tcgggcgttt cgagaccggc cgtcgccggc acgatgcccc
      661 ggtgaatggc gagcacggtg atgaccgcct cgagcgcgcc ggccgccccg agcgtatgcc
      721 cgacgtgacc cttcgtcgac gacacgagca cgcgcgctgc cgcttcgccg agcgccgcgt
      781 ggagcgcgcg cgcctccatc gcgtcgttct gcaccgtgcc ggtgccgtgc gcgttcacgt
      841 agtcgatatc gctcggctcg agacccgccg tagccagagc ccgcaggagg agctcggcgg
      901 catgcgcgcc gctcggctcc gggtgcgtga tgtgatgcgc ctcggccccc gccgcagcgc
      961 cgctcaagaa gccgagaatt tctgcgccgc gcgcgcgggc ggcaccttct cgctcgaggc
     1021 agagaaatgc cgcgccttcg ccgagtccga gcccgcggcg ccggccgtcg aaaggccggc
     1081 acggctcgtt gtcgagcgcc cccagcgcat cgaagccgaa aaacgtgagg cgacagaggc
     1141 cgtcggcgcc tccggcaagc acacagtcga cgctgccggc gcggagccag gccagcccct
     1201 gcgcgatggc gagcgcgctg ctcgaacacg cggcgcagag cgtcgagcgg cggtgcgcgc
     1261 cgccggcgag acgcgcgatg cgctcggtcg tcagatcgag ggggtgtgaa agcagtcgcg
     1321 cggcacgtcg cggatcgatg cggtcgagcg gccccgcgag caaggcctgc tcggtctcga
     1381 acatgccgcc cgtggtgccg ccgagaatca cgccgagccg gccgtctcgg gcaccggcgc
     1441 gcgcgagcgc ctccgcggcc gcgacgagcg ccatgctgtc ggtgcgcgaa aaatcggcgg
     1501 cttcttcggg cgaggccacg agctccgggt cgagcgcgtg cacttccgcc gcgatccggc
     1561 aacgcgcgtc ggcggtatcg aacaacgtga ccgctccgaa gccgcggcgc cccgcgatca
     1621 cggcgtcgaa cgtcgcgtcg gctccggtgc ccagcgccga cacggcgccg attccggtga
     1681 cggccacgcg ctcgatcatg gcaagagagt gtagtcgagt tcgcgcgtta ccgccgtgac
     1741 gacacgtaag cggcgatggc gctcaccgag gcgaagacgc gccgtccctc cgcgtcgtcg
     1801 gggatctcga tcccgtagcg ctcctcgagc gccaccgcga gctgcagcgc gtcgagcgaa
     1861 tcgagcttca agccctcgcc gaacagcggg gcatcgtcgt cgatctcggc ctccgtcttg
     1921 tggcgaaggt ccaaagcctc gatgagcaag cgtttgatct cggatttgag ggcggccgaa
     1981 tccatcgcga tctagcgttc aacctccggc acgacgcagg acggcgcgca ccacctcgct
     2041 cgagccgacg ccgtccacgt ccgcgcgata gctcagcacc agccgatgcc gcagcgccgg
     2101 cagagccacg gccgccacgt cttccacgtc cgccgcgggt tcgccccgca cgacggcgcg
     2161 cgccttggcc gcgagcacga gcgcctgact gccgcgcggt ccggcgccga aacgcacgta
     2221 gtcgctgacc tcttgcggca ctcccgtctc gcccggtcgc gacagccgcg cgaggcgtac
     2281 ggcgaaatcg accgctgcgt ccgtgacggg cacgcgcggc acgagcgcgc ccatctcgcg
     2341 gagctcgtcg acgcgcacga cgggctcgat actggccgcg ggtcccgaag tcgtccgccg
     2401 cgcgatctcg cgctcctcgt cgaccgacgg gtactcgacg tggatctcga gcaagaagcg
     2461 atcgagctgc gcctcgggca acggataggt tccctcttgc tcgatgggat tgcgcgtcgc
     2521 gaaaacctgg aacgggtcgg gaagcgggtg cgtgaccccg cccaccgtca cgcaacgctc
     2581 ttgcatggcc tgaagcaaag ctgcctgcgt cttcggcggc gtgcgattca cctcgtccgc
     2641 gagcacgaga ttcttgaaaa tgggtcccgg ctgaaaaccg atgcgctggc gaatgcgacc
     2701 gtcttcctcg gagtcgctca ggacgtcggt gcccgtgatg tcggccggca ataggtcggg
     2761 cgtgaactgg acgcggccga acgccagatc gagcgcttcg gcgatgctcg agacgagcaa
     2821 cgtcttggcg agtcccggga cgcccaccaa gagtgcgtga ccgcgggcga gcaaggtgac
     2881 gagtaagagg tcgacgaccg cttcgtgacc gaccacgacg cggccaattt gcgcgcgcaa
     2941 gcggcggcaa gcatccgccg agcgctcgag caggagggcg tcaccgccga cgactggaga
     3001 aagagctgcc aaggcatggc attcgtacta caagcctgcc cgatgcgcga agccggcccg
     3061 ccccccctcg ccccgagcgg ccgggaaggc gtggtcgagc gaccgccgcc tggcatggcc
     3121 cgtggtattt tcgccgtttc cccgctggtc gtcacgctcg tcacggcctt gctgctgctg
     3181 ctttcagtcg gttattacac gcttcgcttg ctcaagatcc gccgccgatg aaccgctttt
     3241 tgcgacgcat tctcggagcc ctgctgctcg gtgtcctcgt gtacggggca ttcgtgctct
     3301 acacgggctt ccaccgcatt caagagagcc tcgcgcgctt ccattgggga tcgttcgcgc
     3361 tcgccttggc cctcgcgagc tcgaactact tcatccgctt cgccaagtgg cagtactacc
     3421 tgtcgcgcct cggcgtccgt ggcgtcgcct ggctcgacag cctgctcgtc ttcctgagcg
     3481 gcttcgtgct cacgatcaca cccggtaagg tcggcgaggt gttcaaaagc gccgtgctgg
     3541 cgcgcaccca cgacgtgccg gccgagcgca cggcgcccat cgtcgtcgcc gagcgcctga
     3601 ccgacgccat cggcgtgatc gcgctcatcg tcgtcgggag cggcgcgttc gccggcgggc
     3661 tcacctgggc gatcgcgggg accgcggcgg tggcggtcgg cgtcgggttc atcgtctggg
     3721 aacacccggg ccgacttttg atcgcgtggc tcgaacgcca gagcggcgga ctcggacggc
     3781 tcggtcccaa ggtgcgcgtc gcgctcacca gcttgcgggt cgtagcgggg cccgccgcct
     3841 tgatctggcc gacgctcttg tcgctcgcgg cgtgggcgtg tgaaggagtc gcgctcttcg
     3901 tactgctgcg tggcttcgga gcgccggtgc ccctgggcgt cgccgtcttc ttctattcca
     3961 cggccaccct cgctggcgcg ctgattcccg tgcctggcgg cctcggcgtc gccgagacga
     4021 tgattcagga acagctcgtg cagctcggcc acgtcccggc gggcgacgcg acggccgcga
     4081 tgattctgat tcggttcgcg actttgtggt gggcggtgct ggtcggtttc atggcgctcg
     4141 cgatcctgcg cctccgcttc cccgatcgct tggccggcga cgccggcagc gttcgggtcg
     4201 acacttagaa cgcttcgcgg cagggtgcgg cttggtacta tccggcggat gctccggccg
     4261 ctcctccttc tcgcttgtgg cttcgcgttc ggcaccgcga ctctcggctg cgggggcgcc
     4321 acgaacggca ccaaggcagc cgctgacccg agcgccgcgc catcgggcga cgcgatcggc
     4381 gccgagcacg acgctgatct cgcgggagcc cagggcagaa ccgaagagct caccgatgcg
     4441 acctcgctcg agcacttgaa gcaacgactc gcccgcgcgt cgctctcggg cgtgcgcttg
     4501 aacctcgccg cccgctcgtt tgggcccgag ctcggcggcg tgctcgccgg cgccgcgacg
     4561 ctcgacggtc tcgtcgcgct cgacgtgagc gacaatggtc tcggggctgt cggcgtggaa
     4621 gcgctcgtcg gctcaccgca cctcgcgacg ctccggcaac tcgatctcgg cggcaacgac
     4681 atcgatgatc gcggcgtcct cgcggtcgca cgaagcgggc ggtttcccgc gctcaaggtg
     4741 ctgaacctga gcggcaatgg catcggcctc gacggcgtgc gcgcgctcgc cgcctcaccc
     4801 gtgctcgaag gcgtgcggtc cctcgacctc agcatgaacc cgattggccc cgacggggcc
     4861 cgcgcgctcg cggcttcgcc acacctcgca aacctccact ccctctttct actcggctgc
     4921 gacataggcc ccggcggcgc cgccgcactg tccggcgcga gcggactgcg cgggctcgcc
     4981 gtactcgcct tgtccgggaa cggcatcgcc gacgcgggcg cgcgcgcact cgccgaagcc
     5041 gcgacgctcg gcacactcga gacgctcgac gtgagcgcga acggtatcgc cgacgacggc
     5101 gcgcgcgcac tcgccgcgtc ccctcacctc gcgcgcgtgc gttcgctcga gg
//
LOCUS       DATIML010000813         6346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4212382, whole genome shotgun sequence.
ACCESSION   DATIML010000813 DATIML010000000
VERSION     DATIML010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6346
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4212382"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..984
                     /locus_tag="VLJ38_14000"
     CDS             <1..984
                     /locus_tag="VLJ38_14000"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU40686.1"
                     /translation="QAQVKIIDDILDVSRVITGNFRIDTKPTDVVAIVRDALEVIRPA
                     ASAKKISIDFMPSSDFCLMIADPERLQQVVWNVLSNAVKFTDSGAIQVRVGPEGSKVV
                     ISVRDTGKGIDPAFVPHVFERFRQADSTITRRVGGLGLGLALARHIVELHGGGIAAES
                     DGLGKGATFTITLPVRAIVPVPLDSPQRTSASTGSDEAQSLQGIRILIVDDEPDARDM
                     LAEVLQSAGAIAETARSAAEGYERFRAAPPDVLISDIGMPEEDGYSFIRRIRALPGSE
                     AARVPALALTAFTRPEDRTSASAAGFTTHVSKPVDPEALVSAIANLVNTAN"
     gene            complement(981..1460)
                     /locus_tag="VLJ38_14005"
     CDS             complement(981..1460)
                     /locus_tag="VLJ38_14005"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40687.1"
                     /translation="MTAARRAGKNPRLEAGKTRHPIGLAFSLEGVFCTEVTASLPDSP
                     TVLVVEDDEDTRCAVRDLLTDNGLHVTEAADGRAALDVLTSGKKPAVVVLDLDMPRMS
                     GVELLDIMRRYETLMRVPVVVFSGTDRKVSGLPVVRVIAKAESADALLDAVRTHATG"
     gene            1478..5623
                     /locus_tag="VLJ38_14010"
     CDS             1478..5623
                     /locus_tag="VLJ38_14010"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU40688.1"
                     /translation="MPEPFLPSTTELTSAERRALGVLACEQRLGARALEVLAPELTPE
                     FWRRCVERGWVVDAGAARALGSRGTDVERTFALGPGLRPLVLRHLGDLEELDDVQRTL
                     RASSADPARSGFICALYAGDLGAVERALPELERRAVRGQETTFASSMLREAVAASFDA
                     AWLERTWGELGVRLVEQVLADALFALAPVEALYRFASEHLDEATTPGLRWVLAEHALL
                     RGEIALASSFIAGFASREQLGLRAALAYTSGAFADAQQLLSDYDRSHASAHGAASVTA
                     LLVLLALSREPPEGAKLARRCLPRRKERAPPLAGWPRLSAEPDLSRALRTLLKRMTQP
                     ETERLRLSVHQLPATASPWEAFVHALTVSLQERDEVARLGWARRLVADAERANAGGYS
                     WFSRQAQHLARALSPEALPELRELRPCQAGELLLCELLEPEPEWRRALGALQGFTESV
                     EASEKVVSRRVAWYVDMTNGVPAKPALEEFVRGTGWTRGRRVELDELDAVKDELPPED
                     RAVLRALDSSHLRRRDLPLELLEGLVGHPRVFNGARGRLPVEITRGTCRVETRREHGH
                     LVISLEPAGATEGVNVVVESETRLAVYRVTPTLGKLFGLVPSGVRIPERHEPEAIGVL
                     SRLAEHVEVRSSSLGARKKLDADSTPVLRISPESGAWYVEVGVRPFGARGRFFPPGLG
                     RVAITTREGDDWLDAERDFEREKASFHELTAACPTLALALSGGPVAEAPGGEGSFSGS
                     LGEEDLFTLLSELKQSELSVVLEWQDGRPVTARGTLGVGALHGALKRNKGWYLVTGGV
                     RIDDVMSLDLAELVTLPFTKSGRFLRLPNGDFVEVERRARRVLSLLASAADPPKRGRP
                     AELRIPEAALNTLRSLRDAGYEFDEDASGDGWLARCDQILATDPPLPLGLTATLRPYQ
                     LEGFRWLWRFSQLGLGVCLADDMGLGKTLEAMALLLTRRAGGPALVVAPTSVCRNWLE
                     ELRRFAPSLTVLEYTGKGRAALLEPFRSASPPDVLIVSYALLQHDASELSSLTWNTVV
                     LDEAQFIKNAHSLRARAAFALPARYRLAMTGTPVENHLGDLWSIFHFLNPVLLGTWKH
                     FQLRYLKPIERDRNSEQRAELKALIAPFLLRRVKDDVLSDLPPLTVVRHSVSLNEDET
                     LRYALLRRQIHEKLRTAYGKRQHKLQVFTEITRLRRFCCHPRLVYPDAPSEASKLTAF
                     LELAEELRDNGHRALVFSQFVDFLELAREVLDERGIRYSYLDGSTPKETRHTRVEEFQ
                     NGNNELFLISLKAGGFGLNLTAADYVIHLDPWWNPAVEAQATDRAHRIGQERPVTVYR
                     LITENTIEERIVELHREKRELADALLSGTDDVPELSHELLTELLGVGPAAEVRMQPSS
                     RND"
     gene            5711..>6346
                     /locus_tag="VLJ38_14015"
     CDS             5711..>6346
                     /locus_tag="VLJ38_14015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40689.1"
                     /translation="MLTRKAAGFVLWHPRNTVPPPTLVIGELVSGAPLALADLRSLAL
                     EQDPEFADLWAISAADCGLVEGQVYHYWFEVTLSHPERPNDVRIRITDPTAMSVDWRV
                     RGPRISKPGFSDDDRYPASIVRVVDGQLSYADPDGELETLAEDSPQNLPPNNRIVIYE
                     LPTTWTRSTELGGRDLGVGTFADVLALIDSDAEGEDFADLDVTQVGRKYLLD"
BASE COUNT         1046 a         2137 c         2090 g         1073 t
ORIGIN      
        1 caggctcaag tcaagatcat cgacgatatt ttggacgttt cgcgcgtcat tacgggaaac
       61 ttccgcatcg acacgaagcc gacggacgtc gtcgccatcg tcagagacgc actcgaggtg
      121 attcggcccg cggcgagcgc caagaagatc agcatcgact tcatgcccag cagcgatttc
      181 tgcctgatga ttgcagaccc cgagcggctc cagcaggtcg tgtggaacgt gctctcgaac
      241 gctgtgaagt tcaccgacag cggtgcgatc caagtgcggg tcgggccaga gggctcgaag
      301 gtggttatat cggtgcggga tacgggcaag ggcatcgacc cagccttcgt tccacacgtc
      361 ttcgagcgct tccggcaggc ggactcgacc atcacccgac gcgtcggcgg ccttggtttg
      421 ggccttgcgc ttgcccggca tatcgtggag ctgcacggcg gcggaatcgc cgcggagagc
      481 gacggtctcg gaaagggcgc gaccttcacg atcactctgc ccgtccgtgc gattgttccc
      541 gtgcccctcg acagcccaca acgcactagc gcaagcaccg gctccgatga agcgcagtcc
      601 ttgcaaggga tccgcattct catcgttgac gacgagcctg acgctcgcga catgctcgcc
      661 gaagttctac aaagtgcagg cgccatcgcc gaaactgcgc gctccgctgc cgaaggttac
      721 gagcgcttcc gtgccgcccc gcccgacgtg ctcattagcg acatcggaat gccagaggag
      781 gacggctact ccttcatccg ccgcattcgt gcccttccgg gttcagaagc tgcacgcgtg
      841 ccggcgctgg cgttgacggc attcactcga ccggaagatc gcacgagcgc ctcggccgcc
      901 gggttcacga cgcacgtctc aaagccggtc gaccccgagg cgctggtctc cgccatagcg
      961 aacctggtga acaccgcgaa ttaacccgtc gcatgcgtgc ggaccgcgtc gagcaatgca
     1021 tcggcgctct ccgcctttgc gataacccgg acgacaggga gtccgctcac tttccgatcg
     1081 gttccggaga agacgacgac cggaacacgc atgagggtct cgtacctgcg catgatgtcg
     1141 agcaattcga cgccggacat ccttggcatg tccaagtcga gcacgaccac cgccggcttc
     1201 ttcccggagg tgaggacatc gagcgccgcg cgaccgtcgg ctgcttccgt gacgtggagg
     1261 ccattgtccg tgagcagatc ccgcaccgcg cagcgggtgt cctcgtcatc ttcgacgacg
     1321 agaaccgtcg ggctgtccgg aagtgaagcc gtcacttctg tacagaatac tccttccagc
     1381 gagaacgcca acccgatggg gtgtcgcgtt ttgcccgctt ccaggcgggg gttcttgccg
     1441 gcacgtctgg cggccgtcat gctcggccgt cgcgtcgatg cccgagccgt ttttgccgtc
     1501 cacgacggag ctcacgtcgg ccgagcggcg cgcgctcggt gtgctcgcgt gtgagcagcg
     1561 cctcggggcc cgtgcgctcg aagtgctcgc tcctgagcta acccctgaat tttggcgaag
     1621 gtgcgtcgaa cgagggtggg tcgtcgatgc aggggcggcg cgggcgcttg gctcgcgcgg
     1681 gacggacgtg gagcgcacgt ttgcgctggg gccggggttg cgcccgctgg tcttgcggca
     1741 tttgggcgat ctcgaggaac tcgatgacgt acagcgcacg ctgcgcgcgt ctagtgctga
     1801 tccggcgcgg agtggcttca tctgcgcgct ctacgcgggc gatctgggcg cggtcgaacg
     1861 cgcgctgccg gagctcgaac ggcgcgctgt gcgtggccag gagacgacgt ttgccagcag
     1921 catgctgcgc gaagccgtgg cggcgtcgtt cgacgcggct tggctcgagc gcacgtgggg
     1981 tgagctcggt gtccgtctcg tcgagcaagt gcttgctgac gcattgtttg cgctggcgcc
     2041 ggtcgaggcg ctctaccgct tcgcgagcga acacctcgac gaagcgacga caccggggct
     2101 ccgctgggtg ctcgccgagc acgcgctgct ccgtggcgaa attgcgctgg cttcgtcgtt
     2161 catcgccggc tttgcgagcc gtgagcagct cgggctccgc gccgcgctcg cgtacacgtc
     2221 gggcgccttc gccgacgcgc agcagctcct cagcgactac gaccgttcac acgcgagcgc
     2281 gcacggcgcc gccagcgtga cggcgctgct cgtcctcttg gcgctcagtc gggagccgcc
     2341 cgagggcgca aagctcgcgc ggcgttgcct gccgcgacgt aaagaacggg cgccgccgct
     2401 cgccgggtgg cctcgcctga gcgccgaacc cgacttgagc cgcgcgctcc gaacgctgct
     2461 gaagcgcatg acgcagcctg aaaccgagcg actgcgcttg agcgtgcatc agctaccggc
     2521 gacagcgtcg ccctgggaag cgttcgtgca cgcgctcacc gtgtcgttgc aggagcgcga
     2581 cgaggtggca cgcctcggtt gggcgcgccg actcgtcgcc gacgccgaac gcgccaacgc
     2641 gggcggctac agctggtttt ctcgtcaggc gcaacacctt gcgcgcgcgc tcagtccgga
     2701 ggcgttgccc gagctgcgcg agctccgccc gtgccaagcg ggggagcttt tgctctgcga
     2761 actgttggag ccggagccgg aatggcgccg cgcgctcggc gcgttacagg ggttcaccga
     2821 aagcgtcgaa gccagcgaga aagtcgtctc gcgccgcgtc gcctggtacg tggacatgac
     2881 gaacggcgtg cccgccaaac ccgcgctcga ggaattcgtg cgtggaacgg gctggacgcg
     2941 cgggcggcgc gtggagctcg acgagctcga cgccgtcaaa gacgagctgc cgcccgagga
     3001 tcgagcggtg ctgcgcgcgc tggattcgag ccacctgcgg cgccgcgacc tgccgctcga
     3061 gctcttggaa gggctcgtcg gccatccgcg cgtgttcaat ggcgcgcgcg gacgtttgcc
     3121 ggtcgagatc acgcgcggca cctgccgcgt tgaaactcga cgcgagcacg gtcatctcgt
     3181 gatttcgctc gaacccgcgg gcgcgacgga gggcgtgaac gtggtcgtgg agagcgagac
     3241 gcgtctggcc gtctatcgcg tcacgccgac gctcggcaag ctcttcggcc tcgtgccgag
     3301 cggcgtacgc atcccggagc ggcacgagcc cgaggcgatc ggcgtgctct cgcgactcgc
     3361 cgagcacgtc gaggtccgaa gctctagctt gggtgctcga aaaaaactcg acgcggactc
     3421 cacaccggtg ctccggatct cgccggaatc gggcgcgtgg tacgtcgagg tcggcgtgcg
     3481 cccgttcggt gcgcgcgggc gcttcttccc gccgggtctc gggcgcgtcg cgatcacgac
     3541 gcgcgagggt gacgactggc tggacgccga gcgcgatttc gaacgagaaa aagcgtcctt
     3601 tcacgagctg acggccgctt gtccgacgct cgctctcgcg ctcagcggcg gccccgtggc
     3661 cgaagcaccc ggcggcgaag gcagcttcag cggctcgctc ggcgaggaag atctcttcac
     3721 gctgctgagc gagctcaagc agagcgagct ctcggtcgtg ctcgagtggc aggacgggcg
     3781 gcccgtgacg gcgcgcggga cgctcggcgt gggcgcgctg cacggcgcgc tcaagcgcaa
     3841 caagggctgg tacctcgtga cgggcggcgt gcgcatcgac gacgtgatgt cgctcgatct
     3901 cgccgagctc gtgaccctgc cgttcacgaa atcggggcgc ttcctgcggc tgccgaacgg
     3961 cgacttcgta gaagtcgaac ggcgtgctcg gcgtgtgctc tccctgcttg cgagcgccgc
     4021 cgacccgccg aaacgcggtc gccccgcgga gctccgcatt cccgaagccg cgctgaacac
     4081 gctgcgttcg ttgcgcgacg ctggctacga gttcgacgag gacgcgagcg gggacggctg
     4141 gctcgctcgc tgcgatcaaa ttctggcgac cgatccgccg ctcccgctcg gcctcactgc
     4201 caccctgcgc ccctatcaac tcgagggctt tcgctggctt tggcgtttca gtcagctcgg
     4261 actcggcgtc tgcctcgcgg acgacatggg tctcggcaag acgctcgaag cgatggcttt
     4321 gcttttgacg cgcagggccg gcgggccggc actcgtcgtg gcgccgacct cggtctgccg
     4381 caactggctc gaggagctgc gccgtttcgc gccgagcctc accgtcctcg aatacaccgg
     4441 caaaggacgc gcggcgctgc tcgagccctt tcgctccgcc tccccgcccg acgtcttgat
     4501 cgtcagctac gcgctcctgc agcacgacgc gagcgagctc tcgtccctga cgtggaacac
     4561 cgtcgtgctc gacgaagcgc aattcatcaa gaacgcgcac tccctgcgcg cgcgcgccgc
     4621 gttcgcacta ccagcgcgct accgcctggc catgacgggc acgcccgtcg aaaatcatct
     4681 cggcgacctc tggagcatct tccacttcct gaaccccgtc ctgctcggca cttggaaaca
     4741 ctttcagctc cggtacctca agcccatcga gcgcgaccgc aacagcgagc agcgcgccga
     4801 gctcaaggct ctgatcgcgc cgtttctctt gcggcgggtg aaagacgacg tgctctccga
     4861 cctgcccccg ctcaccgtcg tgcggcacag cgtcagcttg aacgaggacg agacgctccg
     4921 ctatgcgctc ctccgccgac agatccacga aaaattgcga accgcctacg gcaaacgcca
     4981 gcacaagctc caggtcttca ccgagatcac gcgcctgcgt cgcttctgct gtcatccgcg
     5041 gctcgtctac ccggatgcgc cgagcgaggc gtccaagctc acggccttcc tcgagctcgc
     5101 ggaagaactg cgcgacaacg gacaccgcgc tctggtcttc agccaattcg tcgatttcct
     5161 cgagctcgct cgcgaagtgc tcgacgaacg cggcatccgc tactcctacc tcgacggttc
     5221 cacgcccaaa gaaacccgcc atacccgcgt cgaggagttt cagaacggca acaacgagct
     5281 cttcctcatc agcctcaagg cgggcggctt cggactgaac ctcacggcgg ctgactacgt
     5341 gatccacctc gatccctggt ggaacccggc cgtggaagcg caagcgaccg accgcgcgca
     5401 ccgcatcggt caggagcgac ccgtgacggt gtatcgcctc atcacggaaa atacgatcga
     5461 ggagcgcatc gtcgagctac atcgcgagaa gcgagagctc gcggatgcgt tactttcggg
     5521 gacggacgac gtgccggagt tgagtcacga gcttttgacg gagctgctcg gagtgggccc
     5581 ggcagctgag gttcggatgc agccgagctc gagaaatgac tagagcggcg gccgccgagc
     5641 ggcgcaaaat gctagctccg gcgcggtagg tacgacaacc ggggaaggac gagcgtcatt
     5701 ggtcgcagac ttgttgactc gaaaagcggc ggggttcgtg ctctggcatc cgcggaacac
     5761 cgtgccgcca cctacactcg tgatcggtga gctcgtctcg ggggcaccgc tcgcgctcgc
     5821 ggacctccgc agcttagcgc tcgaacagga tccggaattt gcggatcttt gggcgatctc
     5881 ggcggcagac tgcgggctcg tcgaaggcca ggtttaccac tactggttcg aggtcacgct
     5941 cagccatccc gagcgaccga acgacgtgcg gattcggatc accgatccga ccgccatgag
     6001 cgtcgattgg cgagtgcgcg ggccccgcat ctcgaagccc ggattcagcg acgatgaccg
     6061 ctatccagcc agtatcgtgc gtgtcgtcga tggccagctc agctacgcgg atccggacgg
     6121 cgagctcgag acactcgccg aggactcgcc gcaaaaccta ccccccaata accgcatcgt
     6181 catctacgag ctcccgacca cgtggacgcg ctcgaccgag ctaggcgggc gcgacctggg
     6241 cgtcggtacg tttgccgacg tgctggcgct catcgacagc gacgcagagg gcgaggattt
     6301 tgccgacttg gacgtgacgc aagttggccg caaatacttg ctcgac
//
LOCUS       DATIML010000814         2870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1617371, whole genome shotgun sequence.
ACCESSION   DATIML010000814 DATIML010000000
VERSION     DATIML010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1617371"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VLJ38_14020"
     CDS             complement(<1..236)
                     /locus_tag="VLJ38_14020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU40690.1"
                     /translation="MIKGLHHNAYRCRDSEETRAFYEGFLGLPLAATLRIAETKTGRV
                     TETLHTFYRLDDGSFLAFFEAPDMPFEFKVQHDY"
     gene            complement(329..1003)
                     /locus_tag="VLJ38_14025"
     CDS             complement(329..1003)
                     /locus_tag="VLJ38_14025"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSU40691.1"
                     /translation="MKLYMHPVSMTSRPVRLFIAENKIPCDEQVVDLMTGEHHKEPFA
                     AINPNKLVPVLEDGDLRLTESSAILKYLADKIDSPTYPKELKQRAKVNEIMDWFNTNF
                     YRDYAYNMAYPQIFPNHKRSDDGVQSATIAWGTERSRNWLTVLDKHWIGPKNNYVCGS
                     QLTIADYFGVCLVTLGEIVRVDFSSYPNVQRWIGSMKKLESWARINEQLYSFANAVKD
                     APFVTV"
     gene            complement(1061..1849)
                     /locus_tag="VLJ38_14030"
     CDS             complement(1061..1849)
                     /locus_tag="VLJ38_14030"
                     /inference="COORDINATES: protein motif:HMM:NF004868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HSU40692.1"
                     /translation="MSALPEKQTTSIATSTPADVFVRDKSLCRELIGKLTFTEMIYFQ
                     VLGRRPTPAQTAVVDACLVTLMEHGLTPSALATRLVYSSAEEAMQAAVAAGLLAVGSR
                     FVGTTEGAGELFACVLGAGDDGEAEARRIALAHKTEKRPLPGFGHPFHKPDDPRTPVL
                     FALAREHGVAGAHVRAALTLSAAVDATYGKHITLNVTGAIAALLGDAGVPREILRGFS
                     LIARAAGLVGHVHEEQQKPAMRAIWEASERAVPYDGVLPSADDG"
     gene            complement(1846..>2870)
                     /locus_tag="VLJ38_14035"
     CDS             complement(1846..>2870)
                     /locus_tag="VLJ38_14035"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HSU40693.1"
                     /translation="SGTTGLPKGAVISHRAQIVRNLVVRAEFGVTGDEAFVAWSPLYH
                     MGAVDNSLGALMAGGKVITVDGFDRERLAQIVATEALGWLLLMPGMVAGFIGELERRH
                     VKARGVKICGVMADLVPPAEIAKITQLLNAPYANTFGATETGCPPCSSNLLAVGVLPA
                     RLSKAQSRFCEIRLVDADDRDVPDGTPGELCMRGPTLFSGYFRAPEATRYDFRGGWFH
                     MGDVFVRNPDRTLDFVDRVKYLIKSGGENIYPAEIERVLLAEPRVAEAAVVRKPDPKW
                     GEVPVAFVAARDARLSEEELKARCRAELASYKQPKEIHFIAFEDFPRSASGKIQRHEL
                     EKRSKA"
BASE COUNT          459 a          905 c          988 g          518 t
ORIGIN      
        1 tcgtagtcgt gctgcacttt gaactcgaag ggcatgtccg gcgcctcgaa aaacgcgagg
       61 aaggagccgt cgtcgaggcg gtagaaggtg tgcagcgtct ccgtcacgcg gcccgtcttc
      121 gtttcggcga tgcgcagggt cgccgcgagc ggcaagccga gaaacccttc gtaaaacgcg
      181 cgggtctctt ccgagtcgcg gcagcggtaa gcgttgtgat gcagtccctt gatcatccga
      241 atctcgcggg caattagcat agtgccggcg gacccgagcc gccaggaccc gagccgccgg
      301 caccacgcgc gccgcgattt gcgcgtcctc agacggtgac gaagggcgcg tctttgacgg
      361 cgttcgcgaa cgagtaaagt tgctcgttga tgcgcgccca gctctcgagc ttcttcatgc
      421 tgccgatcca gcgctgcacg ttgggatagg acgaaaagtc cacgcgcacg atctcgccga
      481 gcgtgacgag acagacgccg aagtagtcgg cgatcgtgag ctgcgagccg cagacgtagt
      541 tgttcttcgg gccgatccag tgcttgtcga gcacggtgag ccagttgcgc gagcgctccg
      601 tgccccacgc gatcgtcgcc gattgcacgc cgtcgtccga acgcttgtgg ttcggaaaga
      661 tctgcgggta ggccatgttg taggcgtagt cgcggtaaaa gttcgtgttg aaccaatcca
      721 tgatctcgtt caccttcgcc cgctgcttga gctccttcgg gtaggtgggc gagtctattt
      781 tgtcggcgag gtacttgagg atcgccgagc tctcggtgag ccgaagatcg ccgtcctcga
      841 gcacggggac gagcttgttc gggttgatcg ccgcgaaggg ctccttgtgg tgttcgcccg
      901 tcatcaggtc tacgacctgc tcgtcacagg ggatcttgtt ttcggcaatg aagagtcgga
      961 ccggacggct cgtcatcgag accgggtgca tgtagagttt catggttcct ccgctgacct
     1021 ttgccccaaa cggggaccgg cagcttaaca cgaagctcgc tcagccgtcg tcggcactcg
     1081 ggagcacgcc gtcgtaaggg acggctcgtt cactcgcttc ccaaatggcg cgcatcgcgg
     1141 gcttctgctg ctcttcgtgc acgtgcccga cgagcccggc ggcacgcgcg atgagggaga
     1201 agccgcgcaa aatctcgcgc ggcacgccgg cgtcgccgag cagggcggcg atcgcaccgg
     1261 tgacgttcag cgtgatgtgc ttgccgtagg tggcgtccac ggcggcggac agcgtgagcg
     1321 ccgcccgcac gtgggctccg gccacgccgt gctcacgggc gagcgcgaag agcacgggcg
     1381 tgcgcggatc gtcgggcttg tggaaggggt gcccgaagcc gggcagcggg cgcttctccg
     1441 tcttgtgggc gagcgcgata cgtcgtgctt ccgcctcgcc gtcgtcaccg gccccgagca
     1501 cgcacgcgaa gagctcccct gcgccttcgg tcgtgccgac gaagcggctg cccacggcga
     1561 gcagtcccgc ggccaccgcc gcttgcatcg cctcttcggc gctcgagtac acgagccgcg
     1621 tcgcgagcgc gctcggcgtg aggccgtgct ccatcagcgt gacgagacag gcgtcgacta
     1681 ccgccgtttg cgcgggcgtc ggccgcctgc cgagcacctg gaagtagatc atctcggtga
     1741 acgtgagctt gccgatgagc tcgcggcaga ggctcttgtc gcgcacgaac acgtccgcag
     1801 gcgtggaggt cgcgatgctc gtggtctgtt tttccggcag agcgctcatg ctttgctccg
     1861 tttctcgagc tcgtgacgct ggattttgcc cgacgcgctg cgcgggaagt cctcgaaggc
     1921 aatgaagtgg atctccttcg gctgcttgta gctcgcgagc tcggcgcggc agcgcgcctt
     1981 gagctcttct tcgctcaggc gcgcgtcgcg tgccgctacg aacgcgacgg gcacttcacc
     2041 ccacttcggg tccggcttgc ggacgacggc cgcctcggcc acgcgcggct cggcgagcag
     2101 cacgcgctcg atctcggcgg gatagatgtt ctcgccgccc gacttgatca ggtatttgac
     2161 gcgatcgacg aaatcgagcg tgcgatcggg attgcgcacg aagacgtcac ccatgtggaa
     2221 ccagccgccg cggaaatcgt agcgcgtcgc ctcgggagca cgaaagtacc cgctgaagag
     2281 cgtcggcccg cgcatgcaga gctcgcccgg agtgccgtcg gggacatcgc gatcgtcggc
     2341 gtcgaccaag cggatttcgc agaagcggct ctgggccttc gagaggcgcg ccgggaggac
     2401 gccgacggcg agtaggttcg acgaacacgg cggacacccg gtttcggtgg cgccgaaggt
     2461 attggcgtag ggggcgttca ggagctgggt gatcttggcg atctcggcgg gggggacgag
     2521 gtcggccatc acgccgcaga ttttcacgcc gcgcgctttg acgtggcggc gttcgagctc
     2581 accgatgaag cccgcgacca tgcccggcat caagagcagc cagccgagcg cttcggtcgc
     2641 gacgatttga gcgagccgct cgcgatcgaa gccgtccacc gtgatgactt tgccgcccgc
     2701 catgagcgcg ccgagcgagt tgtcgacggc gcccatgtgg tagagcggcg accaagcgac
     2761 gaaggcttcg tcgcccgtga cgccgaactc ggcgcgcacg acgagatttc ggacgatttg
     2821 cgcccgatgg ctgatgacgg cgcccttcgg taaccccgtg gtgccgctcg
//
LOCUS       DATIML010000815         3954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3921728, whole genome shotgun sequence.
ACCESSION   DATIML010000815 DATIML010000000
VERSION     DATIML010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3954
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3921728"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1156
                     /locus_tag="VLJ38_14040"
     CDS             <1..1156
                     /locus_tag="VLJ38_14040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40694.1"
                     /translation="FAASQEGLLASADRGCNWSADSSLGAAPIVDIALESDGSHLLAL
                     VSQPADTHYDIVVYRSDDATQNFTALGAPIASDLLAETIDPAPSDPSRIYVTGRRTSL
                     EALPDDTPAVFLRTRDGGASWERVPIMGTSLSDRAFIAAVDPIDPDVVYVRVQGESKS
                     DGSVIESFLLRTADAGDHWQEIFRGPADMLGFSLNEDGSEVLLGLGDSHDRNGVRAVD
                     PDALGVYRGDAPDFAFEHVSDGQVSCLTRSSSGLFMCSNQAAAAYELGLSTDDGSSAT
                     PLLQLGDIRGPLACGDTGLMCSASWSTSCTLLGKCNVNSASAADAGAESIPGDSAKPA
                     DTANGCGVAARTRAPEPQRAYGASAALLLGAAVARRRKRRTCSTLRPAKT"
     gene            1337..2071
                     /locus_tag="VLJ38_14045"
     CDS             1337..2071
                     /locus_tag="VLJ38_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSU40695.1"
                     /translation="MADMQCVILAGGLGTRMRPRTETIPKSLLEVCGRPFVDHQLEWL
                     ATHGVRDVLLSVGYLGEQLEAHVGDGARYGVNVRYVNEGPTLRGTAGALRLAADQGAL
                     ADEFLLTYGDSYLPIDFGAVAEAFRRSARPGLMTVLHNEGRWDTSNVVFDAESSNIVL
                     YDKSRTRRPASDYRYIDYGLSALRRSVIERDVPRDQKYDLADVFRPLSERGELFGYLV
                     TERFYEVGSPAGLADLEALLSSRSRA"
     gene            2118..2708
                     /locus_tag="VLJ38_14050"
     CDS             2118..2708
                     /locus_tag="VLJ38_14050"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HSU40696.1"
                     /translation="MSPAPELVVLDRDGVLNHLVSHRADGVLESPHAVSEVQILPGVP
                     EALRRLTEAGLVVVLATNQPAAAKGQVTREELDRIHAAIVAESEQAGGRIARSFICYH
                     RAEDGCACRKPRPGLLTAALEATPGARADEAWMVGDRATDVLAGLAVGFRTALLGPVW
                     PGDEEMLKNKGFAPFFRGRDLPEFADFRLKSRRISE"
     gene            2701..3426
                     /locus_tag="VLJ38_14055"
     CDS             2701..3426
                     /locus_tag="VLJ38_14055"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HSU40697.1"
                     /translation="MSDTPMNLKIKLFSDGADLPSLLEMAKNPVISGFTTNPTLMRKA
                     GVTDYVAFAKQVLEHIKDRPISFEVFADEFEEMARQARTIAAWGSNVYVKIPITNTRG
                     ESSLPLVKDLSVTGRVQLNVTAICTLEQVHGVTQALVGGAPAVVSVFAGRVADTGRDP
                     VPHMQAARAICDASGAKAELLWASPRELLNIVQAEKAGAHIITVPPDMLKKMSLFGKN
                     LGDYSLETVRMFHGDAQAAGFKL"
     gene            3423..>3954
                     /locus_tag="VLJ38_14060"
     CDS             3423..>3954
                     /locus_tag="VLJ38_14060"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HSU40698.1"
                     /translation="MNFTQQFLDESVQILKALDSALIDRLATGLAAAREGGGRLFILG
                     VGGSAGHASHAVNDFRKLCAFESYAPTDNVSELTARVNDEGWDTSFSEWLKVSRLGAR
                     DAVLVFSVGGGNKEKNVSPNLVLALELAKAVGARVFGIVGKDGGYTAKVADACVVIPT
                     VSPDRITPHTEGLCAVV"
BASE COUNT          660 a         1333 c         1295 g          666 t
ORIGIN      
        1 gttcgccgcg tcccaggaag gactgctcgc ctcggcggat cgcggctgca attggtccgc
       61 ggactcgtcg ctcggcgcgg cccccattgt cgacattgcg ctcgaaagcg acggctctca
      121 tctgctcgcg ctcgtgtcgc agcccgccga cacccactac gacatcgtgg tctatcgctc
      181 cgacgacgcg acccaaaact tcacggccct cggcgcgccc atcgcgagcg atttgttggc
      241 tgaaacgatc gatcccgcac cgagtgatcc gagccgcatc tacgtgaccg gcaggcgcac
      301 gtcgctcgag gcgctgcccg acgacacgcc cgccgtcttc ttgcgcacgc gcgacggcgg
      361 tgcgagctgg gagcgcgtgc cgatcatggg cacgtcactg agcgatcggg ccttcatcgc
      421 cgccgtggac cccatcgatc cggacgtcgt ctacgtgcgt gtgcagggcg agtccaaaag
      481 cgacggcagc gtcatcgaga gtttcctctt gcgaacggcc gacgcgggcg accactggca
      541 agagatcttt cgcgggcccg ccgacatgct cggcttctcg ctgaatgaag acggaagcga
      601 agttctgctc ggcctcggcg actcgcacga taggaacggc gtgcgtgccg tcgacccgga
      661 cgcgttgggc gtctaccgcg gcgacgcgcc ggacttcgcg ttcgagcacg tgtccgacgg
      721 ccaggtgagc tgcctcacgc gttcgagctc gggcttgttc atgtgcagca accaggcggc
      781 cgccgcgtac gagctcgggc tctccaccga tgatggctcg agcgccactc cgctattgca
      841 gctaggcgac attcggggcc cactcgcctg tggcgacacc ggcctgatgt gctcggcgtc
      901 atggtcgacc agctgcacgc ttctcggcaa gtgtaacgtc aacagtgcct cagctgcgga
      961 tgctggtgct gagtccatac ccggcgattc cgccaagccg gcggacacag ccaatggctg
     1021 cggcgtcgcg gctcgcaccc gagcgcctga accgcaacga gcgtacggcg cgagcgcggc
     1081 gttactcctg ggtgccgcgg ttgctcggcg gcgcaagcgc cggacctgct cgacgctgcg
     1141 acctgccaag acgtgaacgt aagtgagcgt cgtcggagac gggatccggc tgcatgtccg
     1201 aaccgcacag gcgagtggag gcagccgccc cgagcgcccg accaacgatt tcatcctagc
     1261 acgcataaat cataggccgc gcttcgcaac ggattggcgc gtaggcgcga gcctgtacta
     1321 tgccggctgc tgatcgatgg ctgacatgca atgcgtgatc ctcgcgggcg gtctcggcac
     1381 gcgcatgcgg ccgcgcacgg agacgattcc gaagtcgctg ctcgaggtct gcgggcgacc
     1441 gttcgtcgat caccaactcg aatggctcgc gacgcacggt gtgcgtgacg tgctgctctc
     1501 ggtcggatac ctcggcgagc agctcgaggc acacgtcggg gacggcgcgc gctacggcgt
     1561 caacgttcgt tacgtgaacg agggtcccac gctgcgcggg accgccggcg ccctccgtct
     1621 cgccgccgac cagggcgcgc tcgcggacga gttcttgctc acctacggcg attcgtactt
     1681 gcccatcgac ttcggcgccg tcgcggaggc gttccggcgc tccgcgcgtc ccgggctcat
     1741 gacggtgctc cacaacgagg gccgctggga cacgagcaac gtcgtgttcg acgccgaaag
     1801 ctcgaacatc gtgctctacg acaaatcgcg cacgcgccgc cccgcgagcg actaccgcta
     1861 catcgattac ggcctctcgg ccctccgccg cagcgttatc gaacgcgacg tgccccgcga
     1921 ccaaaaatac gatctcgccg acgtcttccg gccgctgagt gagcgcggtg agctctttgg
     1981 ctacctcgtg acggagcgtt tctacgaggt cggctcgccc gcggggcttg cggatctcga
     2041 ggccctgcta agctcacgca gtcgagcgtg agccttcgtt tggagacagc cggagccgat
     2101 tcgaggatag aagcggcatg agccctgcgc ccgaactcgt cgtgctcgac cgcgacggcg
     2161 tgctcaatca cttggtttcg caccgcgccg acggcgtgct cgagagccct cacgccgtga
     2221 gcgaagtcca aattctaccg ggcgtgccgg aagccctgcg gcggctcacg gaagccggcc
     2281 tcgtcgtcgt gctcgcgacg aaccagcctg cggccgcgaa gggtcaagtc acgcgcgagg
     2341 agctcgaccg catccacgcc gcgatcgtcg ccgagagcga acaggcgggc gggcgcatcg
     2401 cgcgctcgtt catttgctac caccgggccg aggacggctg cgcctgtcgc aagccgcggc
     2461 cgggcttact cacggcggcg ctcgaggcga cacccggcgc ccgcgcggac gaagcttgga
     2521 tggtcggcga tcgcgcgacg gacgtgctgg cggggctcgc cgtcggcttt cggacggcac
     2581 tcctcggacc cgtgtggccc ggcgacgaag agatgctaaa aaacaagggc tttgcgcctt
     2641 tctttcgcgg gcgggatctg ccagagttcg cggactttcg gctgaaatcc cgtcggatca
     2701 gtgagtgaca cgccgatgaa cctcaaaatc aagctcttct ccgacggcgc cgatttaccc
     2761 tccttgctcg agatggcgaa aaacccggtc atctcgggct ttacgaccaa cccgacgctc
     2821 atgcgcaagg ccggcgtgac cgactacgtc gcctttgcca agcaggtgct cgagcacatc
     2881 aaggatcggc cgatctcgtt cgaggtcttc gcggacgaat tcgaggagat ggcgcgccag
     2941 gcgcgcacca tcgcggcctg gggctcgaac gtctacgtga agatcccgat cacgaacacc
     3001 cgcggtgaat cgtcgctgcc cctcgtgaag gatttgtcgg tgaccggccg cgtgcagctc
     3061 aatgtgacgg ctatttgcac gctcgagcag gtgcacggcg tgacgcaggc gctggtcggc
     3121 ggcgctccgg ccgtcgtctc ggtgttcgcg gggcgagtcg ccgacacggg ccgcgacccg
     3181 gtgccgcaca tgcaggcggc gcgcgcgatc tgtgacgctt ccggcgcaaa agccgagctg
     3241 ctctgggcga gcccgcgcga gctcttgaac atcgtgcagg ccgaaaaggc cggggcgcac
     3301 atcattaccg tccccccgga catgctcaaa aaaatgagcc tgttcgggaa gaacctcggt
     3361 gactacagcc tggagaccgt gcgcatgttc cacggcgacg ctcaggctgc tggtttcaag
     3421 ctatgaattt tactcagcaa tttttggacg aaagcgtcca gatcctgaag gcgctcgaca
     3481 gcgcgctcat cgatcggctg gccacgggcc ttgccgcagc gcgtgaaggc ggcgggcggc
     3541 tcttcatcct cggcgtgggc gggtcggccg gtcacgcgag ccacgccgtc aacgattttc
     3601 gcaagctgtg cgcgttcgag tcttacgcgc ccaccgacaa cgtctccgag ctcaccgcgc
     3661 gcgtgaacga cgaaggttgg gacacgagct tctcggaatg gctcaaggtg tcccggctcg
     3721 gcgcgcgcga cgccgtgctc gtgttctcgg tcggcggcgg caacaaagaa aaaaacgtct
     3781 ccccgaacct cgtgctcgca ctcgagctcg caaaagccgt gggcgcgcgt gtcttcggca
     3841 tcgtgggcaa ggacggcggg tacacggcca aagtggccga cgcgtgtgtc gtgatcccca
     3901 cggtttcgcc cgaccgcatc acccctcaca cggaggggct ctgcgccgtg gtct
//
LOCUS       DATIML010000816         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5659154, whole genome shotgun sequence.
ACCESSION   DATIML010000816 DATIML010000000
VERSION     DATIML010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5659154"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..878
                     /locus_tag="VLJ38_14065"
     CDS             246..878
                     /locus_tag="VLJ38_14065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40699.1"
                     /translation="MVFTAAWLAAFTMTLGARAEQKNEDTWDGGAGKKNERRADFVFG
                     LSPSLVLMSANGYPNEVSKIDNPAYHSKSGFAAGPGVEAWIGGALTDWFTFGVGGLYL
                     SASGAESKTTGGAFLIRLETFPFYKFGLKDLAVYANFGAGGLSLDGQNGKHAGGSFAS
                     VGGGGVAYELVRLGHFAIAPTAEYLLVASETLTSNQALIGARVVFYGGPS"
     gene            949..>2112
                     /locus_tag="VLJ38_14070"
     CDS             949..>2112
                     /locus_tag="VLJ38_14070"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HSU40700.1"
                     /translation="MPYRSTTTFSGRSMAGARSLWRATGMADADFAKPIVAIANSFTQ
                     FVPGHVHLHDVGQRVKGVIDAAGGWGVEFNTIAVDDGIAMGHGGMLYSLPSRDLIADS
                     VEYMVTAHAADALVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKIVGTHDRDG
                     KALVRKLDLIDSMIAAGDASVSDAELGEMERSACPTCGSCSGMFTANSMNCLNEALGL
                     ALPGNGTLLATHARRWELFSDAAKRVVALAKRYWIDGDKSVLPRSIATFEAFENAMAL
                     DIAMGGSTNTVLHILAIAHEAGVAFEMKDIDRLSRRVPNLCKVAPSSHYHVEDVHRAG
                     GIFTILGELDRAGLIHRDVGTVHAPTLGAAIDANDIRRPTATAEAKQRTLAAPG"
BASE COUNT          362 a          704 c          707 g          339 t
ORIGIN      
        1 gagctccggc aaatcattcg tttcgagctc gaggagcagg cggacggggt gaagctcagc
       61 gtgcagcaga cgaacgtgga cacccaggcg cgcgccgacc actcgggcga caattggcgc
      121 tcggtgctca cgaagctcaa agagctggtc gaagaatgac ggaccgagcc cacgagtcgc
      181 ggtcttttcg tgctcggcct tgacgactcc gagccgccgt ccgaacaaac ggggcgatgc
      241 gccgcttggt tttcaccgcc gcatggctcg ccgcgttcac gatgacgctc ggcgctcgcg
      301 ccgagcagaa gaacgaggac acttgggacg gcggcgccgg caagaagaac gaacggcgcg
      361 ccgatttcgt cttcgggctc tcgcctagcc tcgtgctcat gagcgcgaac ggctacccga
      421 acgaggtctc gaaaatcgac aaccccgctt atcactccaa gagcggcttt gcggcgggcc
      481 cgggcgtcga ggcctggatc ggcggggcgc tcaccgactg gttcaccttc ggtgtcggcg
      541 gcctctattt gagcgcgagc ggcgcggagt cgaaaacgac gggcggcgcg ttcttgattc
      601 ggctcgagac gtttccgttt tacaaattcg gcttgaagga cctcgccgtg tacgcgaatt
      661 tcggcgcggg cgggctcagc ctcgacggtc agaacggcaa gcacgcaggc ggcagcttcg
      721 cgtcggtggg cggaggcggc gtcgcgtacg agctcgtccg gctcgggcat tttgcgatcg
      781 cgcccacggc ggaatacctg ctcgtcgcga gcgagacgct cacgtcgaac caggcgctga
      841 tcggagcgcg cgtcgtgttt tacggcggcc cgagctgagc tacggggcac ggtgttgcgt
      901 gcaacgcacg caccgtcacg gcgggcggct agtgctagcc tctctgccat gccgtatcgc
      961 agtaccacga cgttttcggg gcgcagcatg gcgggcgctc gttcgctctg gcgagcgacg
     1021 ggtatggccg acgccgattt cgccaagccg atcgtcgcca tcgccaacag cttcacgcag
     1081 ttcgtccccg gccacgtgca cctgcacgac gtgggacagc gcgtgaaggg cgtgatcgac
     1141 gccgccggcg gctggggcgt cgagttcaac accatcgcgg tagacgacgg catcgccatg
     1201 ggccacggcg ggatgctcta ttcgctgcct agccgcgatc tcatcgccga cagcgtcgaa
     1261 tacatggtga cggcgcacgc ggccgacgcg ctcgtgtgca tctcgaactg cgataagatc
     1321 acccccggca tgttgatggc cgccatgcgc ctcaacatcc cgactatttt cgtctcgggc
     1381 gggcccatgg aagccggcaa gatcgtcggc acgcacgatc gcgacggcaa ggcgctcgtg
     1441 cgcaagctcg acctcatcga ttcgatgatc gcggcgggag acgccagcgt ctcggacgcg
     1501 gagctcggcg agatggagcg ctcggcttgc ccgacgtgcg gctcgtgctc gggcatgttc
     1561 acggccaaca gcatgaactg cttgaacgaa gcgctcggcc tcgcgctgcc cggcaacggc
     1621 acgctgctcg cgacgcacgc gcgacgctgg gagctcttct cggacgcggc caagcgcgtc
     1681 gtcgctctcg ccaagcgcta ctggatcgac ggcgacaaga gcgttttacc gcgcagcatc
     1741 gcgaccttcg aggcgttcga aaacgccatg gcgctcgaca tcgcgatggg cggctcgacc
     1801 aacaccgtcc tccacatcct cgcgatcgcg cacgaagcgg gcgtggcgtt cgagatgaag
     1861 gacatcgacc gcttgtcgcg gcgcgtgccg aacttatgca aagtcgcgcc gtcgtcgcat
     1921 taccacgtcg aggacgtgca ccgcgcgggc ggcatcttca cgatcctcgg cgagctggac
     1981 cgggccggtc tcattcaccg agacgtcggc accgttcacg cgccgacgct gggcgccgcc
     2041 atcgacgcca acgacatccg gcgccccacc gccaccgccg aggcgaagca gcggacgctg
     2101 gccgcgccgg gc
//
LOCUS       DATIML010000817         1531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4214249, whole genome shotgun sequence.
ACCESSION   DATIML010000817 DATIML010000000
VERSION     DATIML010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4214249"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1531
                     /locus_tag="VLJ38_14075"
     CDS             <1..>1531
                     /locus_tag="VLJ38_14075"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSU40701.1"
                     /translation="AAERRLSSELEGAHGGNEGDAKSAPEQAAKGLGRLADGLKALRQ
                     ALASGGQLSLGELGGLSQGGSSFDEHGYLVGGHGAYHLVLVFPALQSDEGRELKPAVE
                     SIRGARDRALRGLAGKGLQADLTGAPALAVDELKSLQDSSRITSLISTVGIFLLLMLV
                     FRSLRHVGVLLLPLLAGMVISLGFVVLAYGGLNLVTSSFMSVLLGLGIEFGVHLLHRY
                     SEARVDGEDVRPALKTALLSDGPAVALGACTTAAAFLSTTATKFAAFAQLGVITAVGL
                     GVTLVCTIVGFPALLPLLAGKRQPNMHELVGLSTVLRVVGRHARWVLGLSIAATLLAV
                     GSLCVIRPGFNGRTFDFLPAHAESYRGLKRIEESGTPPLDTHFMVDSFDQARELTQKL
                     RRTPEVALVQSPSDLLPPETPERIARIKQAVADLGDYVPVIPAATAAQGPSRLAAFNR
                     LADTLDELSFALRQANLDGGEATRAAHELGELSRWLSGQPDAGASALNRVGQALQGAL
                     AR"
BASE COUNT          230 a          497 c          515 g          289 t
ORIGIN      
        1 ggccgccgag cggcggctgt cgagcgagct cgagggcgct cacggcggca acgagggaga
       61 cgcgaagtca gcgcctgagc aagcggcaaa agggctcggg cgcttagccg acggtttgaa
      121 ggccctacgt caggcgctcg cttcaggggg tcagctttcg ctgggtgagc tcggcgggct
      181 cagtcaaggt ggctcgtcat tcgacgagca tggctacctc gtaggcggtc acggagcgta
      241 ccacctggtc ctggtctttc ctgcgctgca aagcgacgaa ggccgagagc tgaagccggc
      301 cgtcgaaagc atccgcggcg cgcgcgatcg cgcgctccgt ggccttgccg gtaagggact
      361 ccaggccgac cttaccggtg cgccagcgct cgcggtggac gagctgaaga gcttgcaaga
      421 cagctcgcgc atcacttcct tgatctcgac cgttggcatc ttcctgctgt tgatgctggt
      481 gtttcgctcg ctccggcacg tcggcgtgct gctcttgccg ttgctcgccg ggatggtgat
      541 atcgctcggc ttcgtcgtgc tcgcgtacgg cgggttgaac ctcgttacct cgagcttcat
      601 gagcgtactg ctcggcctgg gcatcgagtt tggcgtgcac ctcttgcacc gctattcgga
      661 agcgcgcgtc gacggcgaag acgtgcgccc tgcgctgaag accgcgctct tgagcgacgg
      721 gcctgcagtg gcgctgggcg cgtgcaccac cgcggctgcg tttttgagca ccaccgcgac
      781 gaaattcgcc gccttcgcgc agctcggcgt gatcactgcc gtgggtttgg gcgtgacgct
      841 cgtgtgcacg atcgtgggtt ttccggcgct gcttccgctg ctcgccggca agcgtcagcc
      901 gaacatgcac gagctcgtgg gtctttcgac cgtgctcagg gtggtcggac gccatgcgcg
      961 ttgggtgctc ggactgtcga tcgctgccac gttgctcgca gtcgggtcgc tgtgcgtcat
     1021 ccgaccggga ttcaacgggc gcacgttcga ttttttaccg gcacatgccg agagctaccg
     1081 tggtctgaag cggatcgaag agtcgggcac gccgcccctc gacacccatt tcatggtcga
     1141 ttccttcgac caagcccggg aactcacgca gaagctccgg cgaactccgg aggttgcgct
     1201 ggtgcagagc ccgagtgatc tcttgcctcc ggaaaccccg gagcgcatcg ctcgcatcaa
     1261 acaggcagtc gccgatctcg gcgactacgt tccggtgatc cccgcggcca cggcagcgca
     1321 gggcccgtca cggcttgccg cgttcaaccg gctagccgat acgctcgacg agctttcgtt
     1381 tgctctgcgc caggcaaacc tggacggcgg cgaagcgacc cgcgccgcgc acgagctcgg
     1441 tgagctatcg cgctggctat ccggccagcc cgacgcagga gccagcgcgc tgaaccgcgt
     1501 cggtcaagca ttgcagggcg cgctcgcgcg t
//
LOCUS       DATIML010000818         2501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1909391, whole genome shotgun sequence.
ACCESSION   DATIML010000818 DATIML010000000
VERSION     DATIML010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1909391"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1531
                     /locus_tag="VLJ38_14080"
     CDS             <1..1531
                     /locus_tag="VLJ38_14080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HSU40702.1"
                     /translation="TAIRKALALIHTEGALRRESDEPFDPLDVVARVPAEDASVYDMV
                     SRADTVGVFQIESRAQMAMLPRLRPRRFYDLVIEVAIVRPGPIQGGMVHPYLKRRAAE
                     EKVTFPHPSLKPILERTLGVPLFQEQVMQIAITGAGYSAGEADQLRRDMAAWKRNGKL
                     LRHRERLLEGFAAHGIARAFGEALFEQIKGFGDYGFPESHAASFALLVYLSAWQKAHY
                     PAHFACALLNSQPMGFYSASTLVNDARHHGVEVRDVDVTRSDWDSTLEYDAPRGPALR
                     LGLRQVASVREESARAIERERPFVDLADCLRRTRLHQGEIDALAEAGAFETLVPGRRQ
                     ALFSAHAPRVGGLFEGARFSEPAVTLPPLNLAEQLLFDYRRKKLSVGDHPLRHLRAEL
                     TARRVITAAELAEAPHGRAVSVAGLVITRQQPGTARGVVFVTLEDETGFANLILFRDV
                     FESELWTVLHSTLLLAHGAVERAPITPGAEVAVVHLMVRKLERLAVPGRELPHLSRDF
                     R"
     gene            complement(1542..2267)
                     /locus_tag="VLJ38_14085"
     CDS             complement(1542..2267)
                     /locus_tag="VLJ38_14085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40703.1"
                     /translation="MSGLHMGLTHLPSTHAPALSHFVPHAPQLFASAVVSMQLPEHSV
                     PVMHMQVPLLQVWPVPHVTLAHGSETVPPVAPCPPLAPLPPPVPDIAPLPPLATVPPA
                     PADTEPPAPPVAFAPPVDVPPVAEEPPVLAKLPAVPLDVPPLPTAPELPPVAVAPPFG
                     APAEPPLDFPAEPELLPPTPCPAPEASLPGGASVVPETHARGTNGNAAKRIRVRFHQE
                     CVGIIELSNTLAWRRGRALMLSA"
BASE COUNT          419 a          814 c          847 g          421 t
ORIGIN      
        1 gacggccatt cgcaaagcgc tcgcgctgat tcacactgaa ggcgcgctcc gccgcgagag
       61 tgacgagccg ttcgatccgc tcgatgtcgt cgcgcgcgtg cccgcggagg acgcgagcgt
      121 ttacgacatg gtgagccgcg ccgacacggt cggcgtgttc caaatcgaaa gccgcgccca
      181 aatggcgatg ctgccgcgcc tccggccgcg ccgcttctac gatctcgtga tcgaagtcgc
      241 gatcgtgcgg ccgggtccga ttcaaggcgg catggtgcat ccgtatttga agcgccgcgc
      301 cgcggaagag aaggtgacgt tcccgcaccc gagcctaaaa cccatcctcg aacgcacgct
      361 cggcgtgccg ctctttcaag agcaggtgat gcagatcgcg atcacgggcg cgggctacag
      421 cgcaggcgag gccgatcagc tgcggcgcga tatggcggcg tggaagcgca acggcaagct
      481 cctgcgacat cgcgagcggt tgctcgaagg tttcgcggcg cacggcatcg cgcgcgcgtt
      541 cggtgaggct ctgttcgagc agatcaaggg cttcggcgac tacggcttcc ccgagtcgca
      601 cgcggcatcc ttcgcgctgc tcgtgtactt gtcggcctgg caaaaagcgc actatccggc
      661 gcattttgcc tgcgcgctct tgaactcgca gccgatgggc ttttactcgg cgtcgacgct
      721 cgtcaacgac gcgcgtcatc acggcgtgga ggtgcgggac gtcgacgtga cgcggagcga
      781 ctgggactcg acgctcgaat acgacgcgcc gcgcggcccc gcgctccggc tcgggctacg
      841 tcaggtcgct tccgtacgcg aagagagcgc gcgcgccatc gagcgcgagc ggccgttcgt
      901 cgatctcgcc gattgtttgc gccgcacgcg cttgcatcaa ggcgagatcg acgcgctcgc
      961 cgaagccggc gctttcgaga cgctcgtgcc cggcagacgg caggcgctct tcagcgcgca
     1021 cgcgccgcgc gtcggcggct tgttcgaagg cgcgcgcttc agtgagcccg cggtcacgct
     1081 gcctccgctc aatctcgccg agcaattact cttcgattac cggcgcaaaa agctgagcgt
     1141 gggcgatcac ccgctccgtc atttgcgcgc cgagctcacg gcccggcgcg tgatcacggc
     1201 ggccgagctc gccgaggcgc cgcacggcag agcggtgagc gtcgccggcc tcgtcatcac
     1261 gcgccagcaa ccaggcaccg cacgcggcgt cgtcttcgtc acgctcgagg atgagacggg
     1321 cttcgccaat ttgattttgt ttcgcgatgt cttcgaatcc gagctctgga cggtgctgca
     1381 ttcgacgctc ttgctcgcgc atggtgccgt ggaacgcgcg ccgatcacgc ccggagccga
     1441 ggtcgcggtc gttcatttga tggtgaggaa actcgagcgc ctcgccgtac ccggtcgcga
     1501 gctgccgcac ctgtcgcgcg attttcgatg atgcggaaaa atcacgccga gagcatcaga
     1561 gcccgtcccc gacgccatgc tagcgtgtta ctgagctcga tgatgccgac gcactcttgg
     1621 tggaaacgca cacgtattct ctttgcggcg ttgccgttcg ttcctcttgc gtgcgtctcg
     1681 ggcaccactg acgcacctcc cggcagtgat gcttccgggg ctgggcatgg cgttggtggg
     1741 agcagttccg gttcggccgg gaagtccagc ggcggctcgg cgggcgctcc gaaaggcggc
     1801 gcaacggcga caggcggcag ttcgggcgct gtcggcagcg gcggcacgtc gagcggcact
     1861 gccggcagtt tagcgagcac tggcggttcc tcggcaaccg gcggcacgtc aactggcggc
     1921 gcgaacgcca ccggcggcgc cggcggttcc gtgtcggcgg gtgccggcgg cactgtcgcg
     1981 agcggcggca gcggcgcgat gtccggcacg ggcggcggca acggcgcgag cggcggacaa
     2041 ggcgcgacgg gcggcacggt ttcggatcca tgcgcgagcg tgacgtgcgg caccggccaa
     2101 acctgcagca acggcacctg catgtgcatg accgggacgc tatgttccgg cagctgcatc
     2161 gacacgacgg cagacgcgaa caactgcggc gcgtgcggca cgaagtgcga cagcgcgggc
     2221 gcgtgtgtcg acggcaagtg cgtcaacccc atgtgcaatc cggacacgat gcagcgcagt
     2281 gggcacatca cgaattacca tctctcaacg cccatggtgg cttgtcactt tgagacgagc
     2341 gcgctgcctg ggaattacgg cgcaatgaac gagtacgact ggaacgccgc cgccgtgtgc
     2401 ggtgcctgtg tcgagattac gaataccacc aataaccaaa aggttactgt cacaatcgtc
     2461 gatcagtgcc cttacaaagg caacgagcaa tggtgcttcc a
//
LOCUS       DATIML010000819         2755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2192772, whole genome shotgun sequence.
ACCESSION   DATIML010000819 DATIML010000000
VERSION     DATIML010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2755
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2192772"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="VLJ38_14090"
     CDS             complement(<1..591)
                     /locus_tag="VLJ38_14090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40704.1"
                     /translation="MTPAPAAESAPAPPPVAAPGTLDGLPPPDDSAFLPQPSLLPEIG
                     FQRDPRWAVGIEGRAGVGMMAHSDARGAFAFAGAVLRGHVSYFEVGGFYDHADATATG
                     GTFSHAGGFVGAWLPFSNWVDFDAALGFGVRHYVDSDARYSGSGYSVNCPALSLLLGV
                     SDRARADKVGLRVGGGLVLTQDFGQKDKQWAFQETNA"
     gene            659..862
                     /locus_tag="VLJ38_14095"
     CDS             659..862
                     /locus_tag="VLJ38_14095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40705.1"
                     /translation="MGGAGAFGATGGAGAPALGAVGALGGVVDGGAAAEPDGDDSTGN
                     PAVGGVCAHAGATTESTSAQANP"
     gene            1225..2403
                     /locus_tag="VLJ38_14100"
     CDS             1225..2403
                     /locus_tag="VLJ38_14100"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU40706.1"
                     /translation="MASSSSSSHPLSHYSEWLDPRFRQLLLFQTAFGYAYAALILVPK
                     FATVRLGAGPREVGALAACPTIAAILFAPLCGAWLDRGAHRAAMIGGATLLGASTLGF
                     GYLNAVGPFTYALRALHGVGNLLIVSGSAVFVTRLVPAGHHGRAFGTAGAASLMMNAV
                     ATSATEHLADAFGWPMAYEVAGGACAFALGVSLTQPEVGEPIDASHPSTPNTAVTLRW
                     RAGYATFAAGAGFGMLVTFTQPYALSLGASHVATLFVGYTLTALGVRLGLGGAVDRWG
                     RRRAARVALTIYAVTVLVAAALRPATLFPLGLGFGFAHGLAWPALCALSVENVPSERT
                     GSALTRTQAFFAAGTMAAVWCGGVIADAYGYPAAFVAVGLIVASGALALGAETPSLAR
                     "
     gene            complement(2392..>2755)
                     /locus_tag="VLJ38_14105"
     CDS             complement(2392..>2755)
                     /locus_tag="VLJ38_14105"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HSU40707.1"
                     /translation="LCEGYAEDASRASPTYLKFDPKVAPVKLGIFPLVNKDGMPEIAE
                     KLYTELRTQFTCEFDAKQSIGKRYARMDEIGTPFCVTVDGQTLEDQTVTLRYRDTAAQ
                     ERVALDKVREKLAPSLAR"
BASE COUNT          394 a          956 c          939 g          466 t
ORIGIN      
        1 ggcgttcgtt tcctggaacg cccactgttt gtctttttgg ccgaaatcct gagtcagcac
       61 gagccctccg ccgacgcgca ggccgacttt atcggcgcga gcgcggtcgg agacgccgag
      121 caagagcgac agcgcgggac aattgacgct gtagccgctc ccactgtagc gcgcgtcgct
      181 gtcgacgtaa tggcgcacac cgaagccgag cgccgcgtcg aaatcgaccc aattgctgaa
      241 cggcagccac gcgccgacga agccgcccgc gtgcgagaag gtgccgcccg tcgcagtggc
      301 atcggcgtga tcgtaaaatc cgccgacctc gaagtagctc acgtgcccgc gcaagacggc
      361 gcccgcgaac gcgaatgcac cgcgcgcatc cgagtgcgcc atcatcccga cgcccgcgcg
      421 gccttcgatg ccgacggccc agcgcgggtc cctctggaaa ccgatctcgg ggagcaacga
      481 cggctgcggc agaaaagcgc tgtcgtccgg gggcggcagg ccgtcgagcg tgccgggcgc
      541 agcaacgggc ggcggcgcgg gtgctgactc ggcagcgggc gcgggagtca cccgtgcggg
      601 tgcagtcgcg gggggcggcg tcgtactcgg tgggggcgct gctgacggcg cgctcgatgt
      661 gggcggagcc ggtgcgttcg gcgcgacagg cggcgccggc gccccggcgc tcggtgccgt
      721 cggcgcgctc ggcggcgttg tggacggcgg cgcggccgcg gagccggacg gcgacgattc
      781 cacggggaac cctgccgtcg gtggagtctg cgcccacgcc ggagcaacaa ccgagagcac
      841 cagcgcgcaa gcgaacccgt gaacgaagga cgatgtcatt ggcaagatgg cgtcttcgag
      901 aaccgtaagt gtgagccgga cgcgcttatg gctcggctgc actctcggga agcctcggcg
      961 tgagctcgtt tcgatgagcc caatggatag acgccgaacc tcgcccggac cattgacgaa
     1021 atcgaaaggg agcgctagaa aaactcgctc gggaatgttc atgaccacgc gccagcacgc
     1081 cctcaaggct tggatcgtct gccgtccggc aggcgagggc gcgcagtcac gctaatccgc
     1141 tgattgacgt tagccctcac cgccaggcgg tcgagggcag gcgctgccgg atcttccctc
     1201 ctcctcctgg ctcccacgag ccagatggcc tcttcttctt cctcctctca cccgctcagt
     1261 cactactccg agtggctcga cccccggttc aggcaactgc tcctgttcca gacggcgttc
     1321 ggctacgcgt atgcggcgct gattttggtg ccgaagttcg cgacggtgcg cctcggcgca
     1381 ggtcctcgtg aagtcggcgc actcgcggcc tgtccgacca tcgctgccat cctcttcgcg
     1441 ccactctgcg gagcgtggct cgaccggggc gcacaccgcg ccgccatgat cggcggtgcg
     1501 acgctgctcg gcgcgagcac gctcggcttc ggttacctga acgcggtcgg gccgtttacg
     1561 tacgccctgc gcgcgcttca cggagtcggc aatctgctca tcgtgagcgg ctcggcggtg
     1621 ttcgtgacgc ggctcgtgcc ggctggacac cacggtcgcg ctttcggcac ggcgggtgcg
     1681 gcgtcgctca tgatgaacgc cgtcgctact tcggccaccg agcacctagc ggacgcgttc
     1741 ggctggccca tggcgtacga agtcgcaggc ggcgcatgcg cctttgcgct cggcgtgagt
     1801 ctcacccaac ccgaagtcgg cgaacccatt gacgcctcgc atccaagcac gccgaacacg
     1861 gccgtcacac tgcgctggcg cgcgggttac gcgaccttcg ccgcgggcgc cgggttcggc
     1921 atgctcgtca ccttcacgca gccgtacgcg ctgtcgctcg gcgcctcgca cgtcgcgacg
     1981 ctgttcgtcg gctacacgct cacggcgctc ggcgtgcgcc tcggcctcgg cggcgccgtc
     2041 gaccgttggg gacggcggcg tgccgcgcgc gtcgccctca ccatttatgc cgtcacggtg
     2101 ctcgtggccg cggcgctccg tcccgcaacc ctatttccac tggggctcgg tttcggcttc
     2161 gcccatggcc tcgcctggcc ggcgctctgt gccctctcgg tcgaaaacgt gccctccgaa
     2221 cgcacgggtt cggctctcac gcggactcag gcgttcttcg ccgcgggcac gatggccgcc
     2281 gtatggtgcg gtggagtcat cgccgacgcg tacggctacc ccgccgcgtt cgttgccgtc
     2341 gggctgatcg tggcaagcgg cgcgctcgcc ctcggcgccg aaactccgag cctagcgcgc
     2401 taggctcggc gcgagctttt cgcgcacctt gtcgagcgcg acgcgctcct gcgcggccgt
     2461 gtcgcggtac cggagcgtca cggtttggtc ctcgagcgtc tggccatcga ccgtgacgca
     2521 gaagggcgtg ccgatttcgt ccatgcgcgc gtagcgctta ccgatcgact gcttggcgtc
     2581 gaactcgcac gtgaactgcg tgcgaagctc cgtgtagagc ttctcggcga tctcgggcat
     2641 gccgtctttg ttgacgagcg ggaaaatgcc gagcttcacg ggcgcgacct tgggatcgaa
     2701 cttcaggtag gtggggctcg ctcgcgaagc gtcttccgcg tagccctcgc acagg
//
LOCUS       DATIML010000820         4404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1909844, whole genome shotgun sequence.
ACCESSION   DATIML010000820 DATIML010000000
VERSION     DATIML010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4404
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1909844"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..561)
                     /locus_tag="VLJ38_14110"
     CDS             complement(97..561)
                     /locus_tag="VLJ38_14110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40708.1"
                     /translation="MVLLALAVLGCRADVVDAGPDAVVEEFVQRMQRVHGDPKAARDA
                     YELLWGDAKRSLAERAKRASAVAGRELAPQAMLAPSRFWLSFLPRRYSAHIDGDWAIV
                     TAMGDEPTQRQDVKCVREDGHWRVVLVLPPLPPIQRRDEGAESDQTRPVAAP"
     gene            797..1831
                     /locus_tag="VLJ38_14115"
     CDS             797..1831
                     /locus_tag="VLJ38_14115"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HSU40709.1"
                     /translation="MALSNAGVRLIWPGRPESHAKSVGELRHRRGSDPNLRLIQGDNA
                     ASLRVLAQSGVRVALAYLDPPFFTGREHTLVERRDGRTDESTRAHAFDDRWDSLEAYL
                     ESLVERVRLTRELLLPEGCLVLHVDPRTSHYLKVLCDEVFGAASFASEIVWRYRRWPS
                     KTRNFQRVHDVLLRYVRDPERPPRFRQLYEPLAPSTLATWGDRKQRAVVDASGRRVRS
                     SKTAEATPGTPLGDVWDIGIVAPVAKERTGYPTQKPEALLERLITSCTDPGDLVLDPY
                     FGSGTTGVVCARLGRRVIGVDSNRRAITIARRRLAALAADPVEERLIEPDEAALEEPD
                     AADPSLSRAG"
     gene            1863..2873
                     /locus_tag="VLJ38_14120"
     CDS             1863..2873
                     /locus_tag="VLJ38_14120"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSU40710.1"
                     /translation="MAPQRTLSLLVLVACSAAGTALAADQSPPLITVGTATMSTAAVS
                     RRLAALPAYQLARYGKTASEQKKNFVEQVLVPEMLYGEEAKQRKLDESPALRDRLREA
                     LRDAVDRSVREEVLAKQPVTPDEIKQYYDENKARFETPKRIRLWRIQVADEATAKDIL
                     SQVKGTDGAKKWGDLAREKSLDKATAQRGGELGFVRADGSTDVPRIQVDPTIFTAADK
                     VTDGSLVPQPIHEGDRWSVIWRRGSVEASKRTVEDETASIRQILERRRVDKARQDLIA
                     QLRKDHVTDEHPELLANIDAQTFGAPPRRDFGRDGGVRRVHRELPLGGGPRPPRPDED
                     NR"
     gene            complement(2904..3326)
                     /locus_tag="VLJ38_14125"
     CDS             complement(2904..3326)
                     /locus_tag="VLJ38_14125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40711.1"
                     /translation="MALELTRRKLLRTLSAAAAALWTGVAWAGTYLNRAAVLLAGGAR
                     EANYLRARVADRELAVIVHRLAQARLAAAQEMTVPKEVVLAHPHLLLVLESYEQASEA
                     ATRGDAERFITYYQRALDEERTFRAVLKSFGWVLPDSP"
     gene            complement(3330..4064)
                     /gene="rnc"
                     /locus_tag="VLJ38_14130"
     CDS             complement(3330..4064)
                     /gene="rnc"
                     /locus_tag="VLJ38_14130"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HSU40712.1"
                     /translation="MSASDDVLGRIAALASLSPDSAALEQALTHPSLANERRGVAHNQ
                     RLEFLGDAVLGLCASEELYRAFPDADEGALTRLRAHLVNAEALAAWGRAVGLTSVLRV
                     GRGAAGGGLRESTNVLADAVEALIAAAYVEAGLDAARRLSSAVVRHGLATVSPAALRD
                     AKSELQERLQALGQPAPHYELVEATGPAHERRFRVSVAGGGRRLGEGEGRSKRTAEQA
                     AAAAALDALGKEGDAAVPSSSRSEQP"
     gene            4093..>4404
                     /locus_tag="VLJ38_14135"
     CDS             4093..>4404
                     /locus_tag="VLJ38_14135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40713.1"
                     /translation="MAALLACPFCRTLYRRGEGTQCNVCGVALLPFERLPPSADALAE
                     EPLVPVLPEDEQLPWTYWRRGRGPLLACAVLGIACFFLPWVRIELPETALRSGFDLAR
                     GR"
BASE COUNT          662 a         1574 c         1523 g          645 t
ORIGIN      
        1 gagatcgaag cgatcttctt ctcgaactga gctcgtctcg cacagcgcac ggcgcgtgtt
       61 cctcacgggg cacgcgccgt tcgtattttg tgcggctcac ggtgccgcga cgggccgcgt
      121 ctggtcgctc tcggcgcctt cgtcgcggcg ttgaatcggc ggcagcggcg gcagcacgag
      181 cacgacgcgc caatgaccgt cttcgcgcac gcacttcacg tcttgccgct gcgtcggctc
      241 gtcacccatg gccgtgacga tggcccagtc gccgtcgatg tgagcggagt accggcgcgg
      301 caagaagctc agccagaagc ggctcggagc gagcatggct tgcggcgcga gctcacgccc
      361 agcgacagcg ctcgcgcgtt tggcgcgctc cgcgagggag cgcttggcgt caccccacaa
      421 gagctcgtag gcgtcgcgcg ccgctttggg atcgccgtgc acgcgctgca tgcgctgcac
      481 gaactcctcg acgacggcgt cgggcccggc atcgaccacg tccgcgcggc agccgaggac
      541 agccaacgcg agcagaacca cgccacgtcc gaattgccgg cgatcggtgg tcgctaggct
      601 ggagcagcag ggatacgggc gcgtcactgc tgctggctcg tagccgcgcg cggctgcgcc
      661 cgcaagcgac ccgaggacgc ctgtcgcgtg gcggcgttga gctggcgggc gcgccccagc
      721 agcagccggt catggccgcg tcgcgcgtca aatttggccg tgtccgatga cacctcggta
      781 cgatcgcctt acgcccatgg ccctctcgaa cgcaggcgtc cgcttgatct ggcccggccg
      841 ccccgaatcg cacgccaaaa gcgtcggcga gctccggcac cggcgcggct ctgacccaaa
      901 cctccgtctg atccagggcg acaacgccgc cagcctgcgc gtgctcgcgc aaagcggcgt
      961 ccgcgtggcg ctcgcttact tggatccgcc gttcttcacg ggtcgcgagc acacgctcgt
     1021 cgaacgccgc gacggccgca ccgacgagag cacgcgcgcg cacgctttcg atgatcgctg
     1081 ggacagtctc gaggcgtatc tcgagtcgct cgtcgagcgc gtgcggctga cgcgcgagct
     1141 gctcttgccc gaaggctgcc tcgtgctcca cgtcgatccg cgcacgagcc attacctcaa
     1201 ggtgctctgc gacgaggtct tcggcgcggc ttcgttcgcg agcgaaatcg tgtggcgtta
     1261 ccggcgctgg ccctcgaaaa cgcgcaactt tcagcgcgtc cacgacgtgc tcctgcgcta
     1321 cgtgcgcgat ccggagcggc cgccacgctt ccgccaattg tacgagccgc tcgccccgtc
     1381 gacgctggcc acgtggggtg atcgcaagca gcgcgccgtg gtcgacgcga gcggccgccg
     1441 cgtgcgctcg agcaagaccg cggaggcgac gccaggcacg ccgctcggcg acgtctggga
     1501 catcggcatc gtcgcgcccg tcgcgaagga gcgcacgggt taccccacgc agaaacccga
     1561 ggcgctgctc gagcgcttga tcacgagctg caccgacccg ggcgatctcg tgctcgatcc
     1621 ctacttcggc agcggcacga ccggcgtcgt ctgcgcgcgc ctcggccgtc gcgtgatcgg
     1681 ggtggactcc aatcgccgcg ccatcaccat cgcgcggcgg aggctcgccg cgctcgccgc
     1741 cgacccggtc gaagagcgcc tgatcgagcc ggacgaagcc gcgctggaag agccggacgc
     1801 cgcggacccg agcctctcca gagctgggta acgcagccgg atccgtggta gatcgcgggg
     1861 ccatggcgcc tcagcgaacg ctttccttgc tggtccttgt cgcttgctcc gccgcgggca
     1921 cggctctcgc cgccgaccag agtccgcctc tgatcacggt gggcacggcg acgatgtcga
     1981 ccgccgccgt gtcgcgccgt ctcgctgcgc tgccggctta tcagctcgcc cgctacggca
     2041 agacggcgag cgaacagaag aagaacttcg tcgagcaggt gctcgtgccg gagatgcttt
     2101 acggcgaaga ggcgaagcag cgaaagctcg acgaatcgcc cgcgctgcgc gatcggctgc
     2161 gggaagcgct gcgtgacgcc gtggaccgct cggtgcgcga ggaggtgctc gccaagcagc
     2221 ccgtcacgcc agacgagatc aagcagtact acgacgagaa caaggctcgc ttcgagacgc
     2281 cgaagcgcat tcgtctctgg cgcatccaag tcgcggacga ggcgacggcg aaggacatcc
     2341 tgtcgcaggt gaagggcacc gacggggcca aaaaatgggg cgatttagcg agggaaaagt
     2401 cgctcgacaa ggcgacggcc cagcgcggcg gtgagcttgg gttcgtacgc gcggacggca
     2461 gcaccgacgt gccgcggatt caggtcgacc ccacgatctt cacggccgcc gacaaggtga
     2521 cggacggttc gctcgtgccg cagcccatcc atgagggcga tcgctggtcg gtcatctggc
     2581 ggcgcggcag cgtggaagcc tccaagcgca ccgtcgaaga cgagacggcc tcgatccgcc
     2641 aaatcctcga gcgccgccgc gtcgacaagg cccggcagga tctcatcgca caacttcgca
     2701 aagaccacgt cacggacgag caccccgagc tgctcgcgaa catcgatgct cagacgttcg
     2761 gcgcccctcc gcgccgcgac ttcggccgcg acgggggcgt gcggcgcgtc caccgggaac
     2821 tgccgctcgg cggtgggccg cgcccgccgc gccccgacga agacaaccgc tgaggccgca
     2881 acgcccggct cccgtgactt tggttacggc gagtcgggta ggacccagcc gaacgatttc
     2941 aagaccgctc gaaacgtgcg ctcctcgtcg agggcgcgct ggtagtacgt gatgaagcgc
     3001 tccgcgtcgc cgcgcgtcgc cgcctcgctc gcttgctcgt agctctcgag cacgagcaac
     3061 aggtgtgggt gcgcgagcac gacttctttc ggcacggtca tctcttgcgc ggcggcgagg
     3121 cgcgcctgcg ccaagcgatg gacgatcacg gcgagctcgc gatctgccac ccgagcgcgc
     3181 aggtaattgg cctcacgcgc cccgccggcc aagagcacgg ccgcacggtt caggtacgtc
     3241 cctgcccacg cgacgcccgt ccagagcgcg gcggcggcag ccgagagcgt ccggagcaac
     3301 ttgcggcgcg tgagctcaag cgccatggct cagggctgct ccgaacggga gctgctcggt
     3361 acggcagcgt ctccctcttt tccgagcgca tccagcgcgg cggccgcggc ggcctgctcc
     3421 gccgtgcgct tggagcgtcc ctcgccctcg ccgagccgcc gcccgccacc cgccaccgag
     3481 acgcgaaagc gacgctcgtg cgccgggccc gtcgcctcga cgagctcgta gtgcggcgcg
     3541 ggttgcccga gcgcctggag ccgctcctgg agctcgcttt tcgcgtcacg gagcgccgcc
     3601 gggctcaccg tcgcgaggcc gtgccgaacg acggccgagc tcagacgtcg ggcggcgtcg
     3661 agtcccgctt cgacgtaggc ggccgcgatg agggcttcga cggcgtcggc gaggacattg
     3721 gtgctctcgc gtaaaccgcc gccggcggcg ccgcgcccca cacgcagcac gctcgtgagc
     3781 ccgaccgcgc ggccccacgc cgcgagggcc tcggcgttga cgaggtgggc gcgcaggcgc
     3841 gtgagcgcgc cttcgtccgc gtcggggaac gctcggtaga gctcctcgct cgcacagagc
     3901 ccgagcaccg cgtcgcccaa gaactcgagg cgctgattgt gcgccacgcc gcggcgctca
     3961 ttcgcgaggc tcgggtgcgt gagcgcctgc tcgagcgcgg cggagtccgg ggagagcgaa
     4021 gcgagggccg caattcggcc aagaacgtcg tcactcgcgc tcatcgtcgc ccgtcgacgg
     4081 tatcatgggc ggatggcggc gctcctcgcg tgccccttct gccgcactct gtatcggcgg
     4141 ggcgaaggca ctcagtgcaa cgtctgcggc gtcgcgctcc tacctttcga gcggctgccg
     4201 ccctccgccg acgcgctcgc cgaagaaccg ctcgttccgg tgctgccgga agacgagcag
     4261 ctaccgtgga cgtattggcg ccgggggcgg gggccgctgc tcgcctgtgc cgtgctcggt
     4321 atcgcgtgct ttttcttgcc gtgggtgcgc atcgagctgc cggaaaccgc gctgcggagc
     4381 ggcttcgacc tcgcgcgggg ccgc
//
LOCUS       DATIML010000821         5853 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1332665, whole genome shotgun sequence.
ACCESSION   DATIML010000821 DATIML010000000
VERSION     DATIML010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5853
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1332665"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VLJ38_14140"
     CDS             complement(<1..240)
                     /locus_tag="VLJ38_14140"
                     /inference="COORDINATES: protein motif:HMM:NF013695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HSU40714.1"
                     /translation="MASHSGKKVVLAALAANAGIACVKLVVAALSGSATMLAEAVHSV
                     ADTANQALLLVGMTLAARKDVQRYPLGRESERYFWA"
     gene            complement(287..3238)
                     /locus_tag="VLJ38_14145"
     CDS             complement(287..3238)
                     /locus_tag="VLJ38_14145"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40715.1"
                     /translation="MGPPRAAVEPTVLLVGAGERLTPAFQAALSRYQVQVETTELSAV
                     MDAVIVTAPDLVLLMGEAAKDGGMSVLQRLAGLSKNFTVPVVVLSDEAELDAKLSAFR
                     HGATAVLPRSASIDRTAEQVARMARDIPEHGTDSQGGLGDATLDEFIAVLSKELRAGL
                     SDTFSAAGADAPDLKLTLGRGRPLTEFLDSFVRRVRRHVVRAEPLEYELSGLHGAEAL
                     GGTRPSLPAAAPDIASLRVVVADDDTPRADAVAQELRGRGVTVVVTDLEPSPTRLQTL
                     RQADPTVFIIGEEHDHDAGYDLLRRLRRDARLRWASLLVVRWEEIWSEERGAPALGRL
                     ESTLAGLAEPERALLARAEARVPFDTRLETTGPARLLRTLEKSERPLRVRVENPRVEL
                     TLDISDGLVVGAEGRTLEFEPKPLSGVNALSALLVLGSGRVRIEPVDQPASANVMTPV
                     EAALAMADAETPPITPSVPAAGTVSLHPPRPVEPASAPVPSIRPTPIVAIAAPAAAPR
                     PAVAPGPPSRPLAPRPGALPQASAPKPPQRSAPTPPGPFVAPRLPVPAAALAAPAVHV
                     PPAIAFDATAAASLTPAQLPPVATSTPPHERNPPAMTLSATEPLPRAVPPSPPASPAN
                     RGRARWQTFAARCAAQDAKLHGKRISFGMTAVLVGLGALQGLAIVTIYAGARWLARPR
                     IALESAALARDGVSERKASAFSAASVAAPPAPLASVVAPPPPHSAGSADGSAQSVPDC
                     KGLLGESPPHAGFYPGAALQEMRRGRAAIVHGDLGAARSALCRAASYNQKSAQIALEL
                     ARVLLLERDGAAAEPWARRAVALEPNNAPAQDALGDALAQLGANEEAKQAFIRGARLD
                     AQNEAGLHALLTRAMKQGDQALRHGDLITAERGFRRATVLEPRSSSAASGLSYVLVQL
                     GDVKSGVEWARRAVELAPRSSGAHLALGDALAKSGDKPSAGNEWREAALLDPGNREAQ
                     KRLRAAGLPPP"
     gene            complement(3392..4147)
                     /locus_tag="VLJ38_14150"
     CDS             complement(3392..4147)
                     /locus_tag="VLJ38_14150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40716.1"
                     /translation="MRALVSGIRSRLAGVGFTPPRRALTASCTRRALCLAFLPGLLLA
                     RSAGAEALLVDRTIVRFTAPELGGPRSPRFISARMLALEARIEALADPDRTGAAYRER
                     HVSAALERHIAETMLASLHIEPEPAAEELRQQTEAARRLIEERVGGSEPLAAAARAEG
                     ISRRELTSLYQRQARASLYLDRMVAPMLAPSDAELRALFRNEKTPYRDAPFETVLPGL
                     RRWYVSTRLQAALAAYYQNARSRLRIVFLADAG"
     gene            complement(4159..4896)
                     /locus_tag="VLJ38_14155"
     CDS             complement(4159..4896)
                     /locus_tag="VLJ38_14155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0158 family protein"
                     /protein_id="HSU40717.1"
                     /translation="MRDVPVDWEALEDAFENNAPEVHSYLHVVSGEVLRVVDGIADPE
                     MHARIASDQAYLRIEPVSSREQYRWMERFIPMVEDAPLRGQLSQAIDGKGAFRRFKDV
                     LIAYTTERERWFAFRSERLRVFMEAWLAANAMRPVPRPTWTAEASSEPQASPGAQITQ
                     EALGGRRARTSDALRKQLDEVLEGMGARDLEKVLAFAEFVKARRAARATPARSDVTAT
                     QEDVEKPSQTGSADYEPPSSKQRTAAR"
     gene            complement(4949..>5853)
                     /locus_tag="VLJ38_14160"
     CDS             complement(4949..>5853)
                     /locus_tag="VLJ38_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HSU40718.1"
                     /translation="DPDMCRLLRVPKAILPRIVPSAARLAVTRGVPGLPDGVPIAGLA
                     GDQHAALFGQACFDEGDAKCTYGTGAFLLVNTGARPVPSRAGLLSTLAWQIGAEVAYA
                     LEGSVFIAGAAVQWLRDGLGIIRTAAEIEPLARSVDSSAGVSFVPALAGLGAPYWDSE
                     ARGTVTGITRGTTRAHLARATLEAIALQVDDVLTAMQADLGRPISRLRVDGGAAANDL
                     LMQLQSDFSAISVERPTELESTARGAAMLAGVGVGLFPTPAAAAGICRLDRTFTKELE
                     ASDRTQFRARWEEAVSRARSRKTG"
BASE COUNT          859 a         2063 c         2074 g          857 t
ORIGIN      
        1 cgcccagaaa tagcgttcgc tctcgcgacc gagcgggtag cgctgcacgt ccttgcgcgc
       61 cgcgagcgtc ataccgacga gtaggagcgc ttggttggcc gtgtcggcca cggagtgcac
      121 ggcctcggcg agcatcgtcg cgctgcccga gagcgccgcg acgacgagct tgacgcatgc
      181 gatgccggcg ttcgcggcga gcgccgccag gacgaccttt ttgccggagt gagaggccac
      241 ggcccaggac cttagcgcac gggctcaggg cggcggcagt ccaggctcag ggcggcggca
      301 gtccggcggc gcgcaggcgt ttttgagcct cgcggttgcc ggggtcgagc aaggcggctt
      361 ctcgccactc gttgccggcg ctcggcttgt cccctgattt ggcgagcgcg tccccgagcg
      421 cgaggtgcgc gccagagctc cgcggcgcaa gctcgacggc gcgccgtgcc cattcgaccc
      481 ccgacttcac gtcaccgagc tgcacgagca cgtacgagag tccgctcgcg gccgagctgc
      541 tgcgtggttc gagcaccgtg gcgcggcgga aaccacgctc ggccgtgatc aaatcgccgt
      601 gccggagcgc ctggtcaccc tgcttcatgg cgcgcgtcaa gagcgcatgc aggccagctt
      661 cgttctgcgc gtcgagccgc gcgccgcgaa tgaacgcttg ctttgcttct tcgttcgcgc
      721 cgagctgcgc gagcgcgtca ccgagcgcat cttgtgccgg cgcattgttc ggctcgagcg
      781 ccaccgcgcg ccgcgcccac ggctcggcgg ccgcgccgtc acgctctagc agcaacacgc
      841 gcgcgagctc gagcgcgatc tgcgcgctct tttggttgta gctcgccgct cggcagagcg
      901 cgctgcgggc cgctccgaga tcgccgtgca cgatagccgc gcgcccgcgc cgcatctctt
      961 gcagcgcggc gccgggatag aagcctgcgt gcggcggact ttcgccgagc aggcctttac
     1021 agtcagggac actctgagca gagccgtcag ccgaaccggc ggagtgaggc ggcggcggcg
     1081 cgaccactga agcaagcgga gcgggcggcg ccgcaaccga tgccgctgaa aatgcgctcg
     1141 ctttgcgctc cgacacgccg tcgcgcgcca gcgcggcgct ttcgagcgcg atgcgcggcc
     1201 gcgcgagcca gcgcgcaccc gcgtaaatgg tcacgatcgc aagaccctgc agggcgccga
     1261 gtccgacgag cacggccgtc atgccgaagg agatgcgctt gccgtggagc ttcgcgtcct
     1321 gcgcggcgca cctggccgcg aacgtttgcc agcgcgcgcg cccacggttc gcgggagacg
     1381 cgggcggact cggcgggacg gcacggggca agggctccgt cgcagagagc gtcattgcgg
     1441 gcgggttgcg ctcgtgcggt ggtgtgctcg tggcgacggg cggcaactgc gccggagtca
     1501 atgacgcggc agcggtcgca tcgaacgcaa tcgcgggcgg aacgtgcacc gcgggcgccg
     1561 cgagcgcggc agccggcacg ggcaagcgcg gcgcgacgaa agggccgggc ggcgtgggcg
     1621 cggatcgctg aggcggtttc ggcgcgctcg cttgcggcag ggcaccgggg cgtggcgcga
     1681 gcgggcggct gggcggaccc ggcgccacgg caggccgcgg cgcagcggcc ggcgcggcga
     1741 tcgcaacgat tggcgtcgga cggatggaag gcaccggcgc cgatgcgggc tcgaccggcc
     1801 gcggtggatg caacgaaacg gttccggcgg cgggcaccga aggcgtgatg ggcggcgttt
     1861 cagcgtcggc catcgcaagc gccgcttcga ccggggtcat cacgttcgcg ctcgccggtt
     1921 gatcgacggg ctcgatgcgc acgcgcccgg agccgagcac gagcagcgcc gagagcgcgt
     1981 tcacgcccga aagcggcttc ggttcgaatt ccagcgtccg accctcggcg ccgacgacga
     2041 gcccgtccga aatatcgagc gtgagctcga cgcgcgggtt ctcgacgcgc accctgagcg
     2101 gtcgctctga tttttcgagc gttcgcagca ggcgcgcggg gcccgtcgtc tcgaggcgtg
     2161 tgtcgaacgg cacgcgagct tcggcgcggg ccaagagcgc gcgctccggc tccgcgagcc
     2221 ctgcgagcgt cgactcgagc cgcccgagcg ccggcgcccc tcgctcctcc gaccaaatct
     2281 cctcccagcg cacgacgagc agcgacgccc agcgcaggcg cgcgtcgcgc cgcaaccggc
     2341 gcaagagatc gtaaccggcg tcgtggtcgt gctcttcgcc gatgatgaac acggtgggat
     2401 ccgcctggcg caacgtctgc aggcgcgtcg ggctcggctc gaggtcggtc acgacgacgg
     2461 tgacgccgcg gccgcgcaat tcctgggcga ccgcgtcggc gcgcggcgtg tcgtcgtcgg
     2521 cgacgaccac gcgcagcgac gcgatgtcgg gcgccgcggc gggcaagctc ggacgggtcc
     2581 cgccgagcgc ttcggcgccg tgcaatccgc taagctcgta ctccagcggc tcggcgcgca
     2641 cgacgtgacg ccgcacccgc cgcacgaagg aatccaaaaa ttcggtgagc ggccggccgc
     2701 gtccgagcgt cagcttcaga tcgggtgcgt ccgcgcccgc cgcggagaac gtatccgaaa
     2761 gccccgcgcg cagctccttg gagagcacgg caatgaactc gtcgagcgtc gcgtctccga
     2821 ggccaccttg cgagtcggtg ccgtgctcgg gaatgtcgcg cgccatccgc gcgacctgct
     2881 cggccgttct gtcgatgctc gccgaacgcg gcagcaccgc cgtcgcgccg tgccgaaacg
     2941 cgctgagctt cgcgtcgagc tcggcctcgt cgctgagcac gacgaccggc acggtgaagt
     3001 ttttcgacaa gccggcgagc ctctgcagca ccgacatacc gccgtccttc gcggcttcgc
     3061 ccatcagcag cacgagatcg ggcgccgtca cgatcaccgc atccatgacg gcgctgagct
     3121 ccgtcgtctc gacttgaact tggtaacgtg agagcgccgc ctgaaatgcg ggcgttagac
     3181 gctcccctgc cccgacgagg agcacggtgg gctcgacggc ggcgcgaggc ggccccatgc
     3241 aaccgaaagc attgcgcagt ccttgcgcga ggtcgagcgc cgcgccctcg ccgcggtgcc
     3301 acctttccct tcatgcgcgc tctctttcgt acaaattgcg gcgccgttcg cgcgcgggac
     3361 gcgcccttcg cgggaagagc gcgcgctcgc gtcagccggc gtcggcgaga aacacgatcc
     3421 ggagccgcga ccgggcgttt tggtaataag cggcgagggc ggcttgcagc cgcgtcgaaa
     3481 cgtaccagcg ccggaggccg ggcagcaccg tctcgaacgg cgcgtcgcga tacggcgttt
     3541 tttcgttgcg gaaaagagcg cgcagctcgg cgtcgctcgg cgcgagcatc ggcgcgacca
     3601 tgcgatcgag gtaaaggctt gcgcgcgctt gtcgctggta gagcgacgtt agctcgcgcc
     3661 ggctgattcc ttcagcgcga gccgccgccg cgagcggctc gctgccgccg acacgctctt
     3721 cgatcaagcg cctcgccgcc tccgtctgct ggcgcagctc ctcggcggcc ggttcgggct
     3781 cgatgtgcag actcgcgagc atggtttcgg cgatgtggcg ctcgagcgcg gccgagacgt
     3841 gccgttcgcg gtaagcggcg ccggtacgat cgggatcggc gagcgcttcg atgcgggcct
     3901 cgagcgccag catgcgcgcg gaaatgaagc ggggagatcg aggtccgccg agctcgggcg
     3961 ccgtgaagcg cacgatcgtg cgatcgacga gcagtgcttc ggcgcccgcc gacctcgcca
     4021 gcagcagacc cggcaagaac gcgagacaga gggcgcgccg cgtgcacgag gccgtgagcg
     4081 cgcgtcgtgg cggcgtgaac cccacgcccg ctaacctcga gcgaatcccg ctgacgagcg
     4141 cgcgcaccga gctctcgctc agcgcgcggc cgtgcgctgc ttggacgagg gcggctcgta
     4201 gtcggcgctg cccgtttggc tcggcttctc gacgtcttct tgcgtggcgg tcacgtcgga
     4261 gcgcgccgga gtcgcgcgcg cggcacggcg cgccttcacg aactcggcga acgcgagcac
     4321 cttctcgaga tcgcgggcgc ccatgccctc gagcacttcg tcgagttgct tcctgagtgc
     4381 atcgctggtg cgcgcgcgac gcccgccgag tgcctcctgg gtgatttgcg cacccgggct
     4441 cgcctgaggc tccgacgagg cttccgcggt ccacgtcggg cgcggcaccg ggcgcatcgc
     4501 gttcgcggcg agccacgcct ccatgaacac gcgcagccgt tcgctgcgga aggcgaacca
     4561 gcgctcgcgc tcggtcgtgt aggcgatgag cacgtctttg aagcgccgaa aggcgccctt
     4621 accgtcgatg gcctgcgaga gttgcccccg gagcggcgca tcttccacca tcgggatgaa
     4681 gcgctccatc cagcggtatt gttcgcgcga gctcacgggc tcgatgcgga gataggcttg
     4741 atccgacgcg atgcgcgcgt gcatttccgg atcggcgatg ccgtcgacga cgcggagcac
     4801 ttcccccgag acgacgtgca ggtagctgtg cacctcgggc gcgttgtttt cgaacgcgtc
     4861 ctcgagcgct tcccaatcga cgggaacgtc gcgcatcggc tggcctgcac cgcggctcag
     4921 atcgtctgcc atctcgggaa acaagacttt accctgtttt cctcgaacgc gctcgactca
     4981 cggcttcttc ccagcgtgca cgaaattgtg tccggtcact cgcttcgagc tctttggtga
     5041 aggtccggtc gagccggcag atgccggccg cggccgctgg agtcggaaaa agccccacgc
     5101 ccacgcccgc cagcatggct gccccgcgcg ccgtggattc tagttccgtc ggccgctcga
     5161 ccgatatcgc ggaaaagtcg ctctgaagct gcatcaagag gtcgttcgcc gcggctcctc
     5221 cgtccacgcg cagccgggaa atcggtcgcc ccaagtcggc ctgcatcgcc gtgagcacgt
     5281 cgtccacctg caacgcaatc gcttcgagcg tcgcgcgcgc gaggtgagcc cgcgtcgtcc
     5341 cccgcgtgat ccccgtcacg gtcccgcgcg cctcggagtc ccagtagggt gccccgagcc
     5401 ccgcgagggc ggggacgaac gagactccgg cgctcgaatc gacgctgcgc gcgagcggct
     5461 cgatctcggc ggcagtccga atgatgccga gcccatcgcg cagccactgc acggccgctc
     5521 ccgcgatgaa cacgctgccc tcgagcgcat acgcgacctc agcgccgatc tgccaagcca
     5581 gcgtcgacaa gagtcccgcg cgactcggca ccggacgcgc acccgtgttc acgagcagga
     5641 acgcgcccgt gccgtacgtg cacttcgcgt cgccctcgtc gaagcacgcc tgtccgaaga
     5701 gcgccgcgtg ctgatcaccg gcaagcccgg cgatgggaac gccgtcgggc aatcccggca
     5761 cgccgcgcgt gacggcgagg cgcgccgcgc tcggcacgat gcgcggcaag atcgcttttg
     5821 ggacgcgcaa gaggcggcac atgtccgggt ccc
//
LOCUS       DATIML010000822         7363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4215174, whole genome shotgun sequence.
ACCESSION   DATIML010000822 DATIML010000000
VERSION     DATIML010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7363
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4215174"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..789)
                     /locus_tag="VLJ38_14165"
     CDS             complement(<1..789)
                     /locus_tag="VLJ38_14165"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HSU40719.1"
                     /translation="MRAFLAALACFSATALAALPSRASGFLIYDLSGEGIGRASAVSA
                     DASEPDAGWFNPAGLAYQDGVNGSVGGVFVTARSSFELKTTGAQTSSERGNYVLPALF
                     VNGKITDRLAAGIGVYSAFGIGLKWPYDWVGRESAISASLQSVTINPNVAFALSPNWS
                     VAAGFDATRGSVDFRNGLPAIVGGDVRLAGGGWGYGFNAAVLYRAIPEQLQFALTYRS
                     RTKLSFEGRADFSPQNPDFSRALADQPGSAAFTLPDILTAGVMGR"
     gene            complement(786..2111)
                     /locus_tag="VLJ38_14170"
     CDS             complement(786..2111)
                     /locus_tag="VLJ38_14170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40720.1"
                     /translation="MRAPGVGAKLAGFSLLVAASCTPDIGHDPVPDAMEFDTEAAPPR
                     VPQPTGLIVNPATGKIDFALAGTPLPADCAKSEVVSPAECQFDRYLETLDGFPTLSPA
                     AAPATAALDPDTLTLGDNVMVVPLRNPSTTPHVVLGFDDATRALGVRAVPSWALGETY
                     FVAVRGYAKGVRAKSGTEVVGSPTQALLKQDSSLTCGAASPDAIDPNCPALELLTQTQ
                     PDAAARQSAVTLEAIRQSYLASGIWQRLSDAGLPKSEVAVLWEFPIHTASVAEVDPSV
                     GLVPAVTAANEIRVAVHGAVDPASVSGFIVRKQAGSVVLMDLTAAATGDLVAGFPEIE
                     AEYAEGAIVVRGKAPLLAGHQYGIFMTNELRAPNGASLVPAPISVLLSLAYPVADANG
                     KSLVSSVADADAVVLEAGRAELAPVFDNLGPLTGLTRDNLVYCFAFEVP"
     gene            complement(2108..3985)
                     /locus_tag="VLJ38_14175"
     CDS             complement(2108..3985)
                     /locus_tag="VLJ38_14175"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HSU40721.1"
                     /translation="MTRNPHLVGFRVWSGLALGIAFGLATAGCGSDEPAAPPSGGSGA
                     TQKLLILHTNDLHSYLNGFAPEQDYTPLTKGDDTTRGGMARLAAAVASERASAASAHE
                     PVLLLDAGDFMMGTLFELLGTTQAPELTFFQDLGYDATTLGNHEFDWTSAGLAAILSA
                     AGAQGVKVPIVASNLQFSAEDAGDDALEAVAAAGMIQPKLVKTVGKLKVGFFGLLGSD
                     AATVTPQAAPVTFEAIADAASGMVTELRETDHVDLVVALSHSGIHADGTGEDAKLAMD
                     APGIDLIVSGHTHDSLTQPVRVGNTWIVTAGSYGRFLGELSLSVTPATKAGDPATLAV
                     EDYTLRAIDDSIAGDAATQTKVDGYVDAIDAALSSADLGYHDVVATTETDLPLPQYAE
                     APIGNLVTDAYRTLGTALQPDDPPVIAVDANGQIRADIKQGTSGNVWLADLFRVSPDG
                     IGPDKMPGFPLVTFYLNAADIASGLELGLAPELASNDYFLQVSGLKVEHGKGNPLGRI
                     TRISLVTADGEQELDPSDETTCYKIVTTNYVAGLLGVVEQFTGGLLSVTAKDSDCKTP
                     VDPTTRFIDADPKTQGVQELKQWQALLGYVSALPDSDGDGIPNIPAAYGSPQGRYVEV
                     K"
     gene            4110..5045
                     /gene="ppk2"
                     /locus_tag="VLJ38_14180"
     CDS             4110..5045
                     /gene="ppk2"
                     /locus_tag="VLJ38_14180"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HSU40722.1"
                     /translation="MSELEERVTSWLEAELEDNLDEDYELELGDSPLREEIAKIYQGK
                     PRPTLERGKYFRELLKLQSELIKLQTWVAHTGAKIVVLFEGRDSAGKGGAIKRITQRL
                     NPRICRVVALPAPSEREKSQWYFQRYVPHLPAAGEIVLFDRSWYNRAGVERVMGFATD
                     EQVEQFFDDAPAFEHLLVRSGIILLKYWFSISDEEQQLRFLTRIHDPMKQWKLSPMDL
                     ESRVRWEEYTTAKEEMLERTHTPDARWYLVEGNDKRAARLNCIHHLLQQVPYTDVPHD
                     PIALPERVFDPDYERKKLPREMYVPNVYGQAADAR"
     gene            complement(5070..6248)
                     /locus_tag="VLJ38_14185"
     CDS             complement(5070..6248)
                     /locus_tag="VLJ38_14185"
                     /inference="COORDINATES: protein motif:HMM:NF005761.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain"
                     /protein_id="HSU40723.1"
                     /translation="MRIAINGAGVAGPALAYWLKRFGHEPVLFEKAPALRTGGYVIDF
                     WGLGYELAERMGILEGLVERGYAMQRMKMVDAEGREVARMEVEPIRESLRGRFISVAR
                     SDVAAALVAACRDVPVQFGTSIVGFQEDPDGITAALSDGRHERFDLVVGADGLHSRVR
                     AVGFGEDPRHERPLGCHVAAFRLEHYPHQDELTYVSHTAPKRQVARMTLRDGQTLVLL
                     ICRSELLAAESVGTNVKEALRRAFSGMGWEVPDILARMEGVDELYFDAVSQIRLDTWS
                     RGRVALVGDAAACVSFLAGEGTGLAMIEAYVLAGELHRAGGDWARGLREYEARLRVFL
                     RDKQRSALQFRGFFVPRTGLGLALRNVLVNAFALPFVAKRLVGRSVRDDLELPAYEQN
                     "
     gene            complement(6263..6559)
                     /locus_tag="VLJ38_14190"
     CDS             complement(6263..6559)
                     /locus_tag="VLJ38_14190"
                     /inference="COORDINATES: protein motif:HMM:NF039620.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5985 family protein"
                     /protein_id="HSU40724.1"
                     /translation="MIDFLWGAIATLCAIAALFFVKFWRQTRDGLFVGFALGFGTLAL
                     HWTVLAVIHPTSETRHYVFWLRLLAFVFILGAVVLKNTTAPPGPSGSGQRAGRT"
     gene            complement(6556..6813)
                     /locus_tag="VLJ38_14195"
     CDS             complement(6556..6813)
                     /locus_tag="VLJ38_14195"
                     /inference="COORDINATES: protein motif:HMM:NF039620.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5985 family protein"
                     /protein_id="HSU40725.1"
                     /translation="MAEVTYVLCAFASIFCALLLIRNYQRTRLRLALLAALCFVGLAL
                     NNVLLFIDLVLVPEVDLRILRAVIALAALLLLVVGLVLEER"
     gene            complement(6806..7213)
                     /locus_tag="VLJ38_14200"
     CDS             complement(6806..7213)
                     /locus_tag="VLJ38_14200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40726.1"
                     /translation="MAAEREELRRWLFQYCEDLGELEILARLRDVRDGEPLNEVEIAT
                     LSGLTPEMTQEALRRLSSRELLASTGAPPRYRYAIVDAETRERVNQVIEVYRAQPIEI
                     MSLLTANALERVRTAAVSTFAECFRFGGPKSRG"
BASE COUNT         1298 a         2430 c         2452 g         1183 t
ORIGIN      
        1 gcggcccatg acgcccgcgg tgaggatgtc gggcaacgtg aacgcggcgc tgcccggctg
       61 atcggcgaga gcgcgcgaaa aatcggggtt ttgcgggctg aagtccgctc tgccctcgaa
      121 cgagagcttc gtgcggctgc gataggtgag cgcgaactgg agctgctcgg ggatggcgcg
      181 atagagcacc gcagcgttga agccgtagcc ccatccgcca ccggcgagac gcacgtcgcc
      241 gcccacgatc gccggtaagc cgttgcggaa atcgacggag ccgcgcgtcg cgtcgaagcc
      301 cgccgcgacc gaccagtttg gactcagcgc gaacgcgacg ttcgggttga tcgtcacgct
      361 ctggagcgac gccgaaatcg cgctttcgcg gccgacccag tcgtacggcc acttcaggcc
      421 gatgccgaac gcgctgtaga cgccgatacc ggccgcgagt cggtcggtga ttttgccgtt
      481 cacgaacagc gccggcagca cgtaattacc ccgttcgctg ctcgtttgcg cgcccgtcgt
      541 cttgagctcg aagctcgagc gcgccgtgac gaacacgccg ccgacggacc cgttcacacc
      601 gtcctgatac gcgagccccg ccggattgaa ccaacccgcg tcgggctcgg acgcatcggc
      661 gctcacggcc gaagcacggc cgatcccttc gccggacagg tcgtaaatca aaaagccgct
      721 tgcacggctc ggcagcgcgg cgagcgccgt cgccgagaag cacgcaagcg cggcgaggaa
      781 tgctctcatg gcacctcgaa cgcgaagcag tagacgagat tgtcgcgcgt gagccccgtg
      841 agcgggccga gattgtcgaa cacgggcgcg agctcggcgc gtccggcctc gagtacgacg
      901 gcgtcggcgt cggcgacgct cgagaccaag ctcttgccgt tcgcgtcggc gacgggatac
      961 gcgagcgaga gcaacaccga aatcggcgcc ggaacgagcg acgcgccgtt cggagcacgc
     1021 agctcgttgg tcatgaatat cccgtattgg tgcccggcca aaagcggcgc cttgccgcgc
     1081 acgacgatgg cgccctcggc gtattcggct tcgatctcgg gaaaccccgc gaccagatcc
     1141 ccggtcgcgg cggcggtgag atccatgagc acgaccgagc ccgcctgctt gcgcacgatg
     1201 aacccggaca cactcgccgg atccaccgcg ccgtgcaccg cgacgcggat ttcgttggct
     1261 gcggtcactg ccggcacgag accgacgctc gggtcgacct cagcgaccga ggccgtgtgg
     1321 atcgggaact cccacagtac ggccacctcg cttttgggta gccccgcgtc cgaaagccgc
     1381 tgccaaatac cgctcgcgag gtagctttgg cggatggctt cgagcgtgac ggcgctttgg
     1441 cgcgccgccg cgtcgggctg tgtttgggtg aggagctcca gagcggggca gttcgggtcg
     1501 atggcgtcgg ggctggcggc gccgcacgtg agggacgagt cttgtttgag gagcgcctgc
     1561 gtcggcgacc ccacgacttc ggtgccggac ttggcgcgga cgcccttggc gtagccgcgc
     1621 accgcgacga agtacgtttc accgagcgcc cagctcggca cggcgcgcac gccgagcgct
     1681 cgtgtcgcgt cgtcgaagcc gagcacgacg tgcggcgtcg tactcgggtt tcggagcgga
     1741 acgaccatga cattgtcgcc gagcgtcaac gtgtcggggt cgagcgcggc cgtcgcgggg
     1801 gccgcggcgg gcgataacgt cggaaacccg tcgagcgtct cgaggtaacg atcgaactgg
     1861 cactcggcgg gcgacacgac ctcggacttc gcgcaatcgg cgggcagcgg cgtgcccgcc
     1921 agcgcgaagt cgatcttacc cgtcgcggga ttcacgatga gccccgtcgg ctgcggcacg
     1981 cgaggcggcg ccgcctcggt gtcgaattcc atcgcgtccg gcacgggatc gtggccgatg
     2041 tcgggcgtgc agctcgccgc gacgagcagg ctgaagccgg cgagcttcgc gccgacgcca
     2101 ggcgccctca tttcacctcg acgtagcggc cttgtgggga gccgtacgcc gccggaatgt
     2161 tcgggatccc gtcgccgtcg ctgtccggca acgccgacac gtagccgagc agggcttgcc
     2221 actgcttgag ctcttgcacg ccttgcgtct tgggatcggc gtcgatgaaa cgcgtcgtcg
     2281 ggtcgacggg cgttttgcag tcggagtcct tggccgtcac gctgagcagc ccaccggtga
     2341 actgctcgac cacgccgagt aggccagcga cgtagttggt cgtcacgatc ttgtagcaag
     2401 tcgtctcgtc gctcggatcg agctcctgct cgccgtcggc cgtgacgagt gagatacgcg
     2461 tgatgcgccc gagcgggttg cccttgccgt gctcgacctt gaggccggag acttgcaaaa
     2521 aatagtcgtt cgacgcgagc tcgggggcca agccgagctc gagaccggac gcgatgtccg
     2581 cggcattcag ataaaacgtg accagcggaa accccggcat cttgtcgggc ccgatcccgt
     2641 cgggcgagac gcggaagaga tcggcgagcc atacgttgcc cgacgtgccc tgcttgatgt
     2701 cggctcggat ttgtccgttg gcgtcgacgg cgatcacggg tggatcgtcg ggctgtagcg
     2761 ccgtgccgag cgtgcggtag gcgtccgtca cgaggttgcc gatgggagct tccgcgtatt
     2821 gagggagcgg cagatccgtc tcggtggtcg ccacgacatc gtggtagccg aggtccgcac
     2881 tcgaaagcgc cgcgtcgatg gcatcgacgt agccgtcgac tttcgtctgc gtggcggcgt
     2941 cgccggcgat ggagtcgtcg atggcgcgga gcgtgtagtc ctcgaccgcg agcgtcgccg
     3001 ggtcgccggc tttggtggcg ggcgtgacgg agagcgacag ctcgccgagg aaacgaccgt
     3061 acgagcctgc ggtgacgatc caggtgtttc cgacgcgcac cggctgagtg agcgaatcgt
     3121 gcgtgtgacc gctcacgatg agatcgatgc ccggcgcgtc catggcgagc ttggcgtctt
     3181 cacccgtgcc gtccgcgtga atgcccgagt gcgagagcgc gaccaccaag tctacgtgat
     3241 cggtctcgcg cagctccgtc accatgccgc tcgcggcgtc ggcgatcgct tcgaatgtca
     3301 ccggcgcggc ttgtggtgtg accgtcgccg cgtcgctgcc gagcagaccg aaaaaaccga
     3361 ccttcagctt gccgacggtc ttcacgagct tcggctggat catgcccgcg gccgccacgg
     3421 cttcgagcgc gtcgtcgccc gcgtcctccg cgctaaattg caggttgctc gcgacgatcg
     3481 gcaccttcac gccttgcgct cccgccgcgc tcaggatcgc ggccagtccc gccgaagtcc
     3541 aatcgaactc gtggttgccg agcgtcgtcg cgtcgtaccc gaggtcctgg aagaaggtca
     3601 gctccggtgc ttgcgtcgtg ccgagcagct cgaagagcgt gcccatcatg aaatcgccgg
     3661 cgtcgagcaa gagcaccggc tcgtgcgcgc tcgccgcgct cgcgcgctcc gaagcgaccg
     3721 cggcagcgag ccgtgccatg ccgcccctcg tcgtatcgtc gcctttcgtg agcggcgtgt
     3781 agtcctgttc gggcgcaaac ccgttcaaat aggaatgcag atcgttcgta tgtaagatca
     3841 atagcttttg cgtcgcgccc gagcccccgc tcggcggcgc ggcgggttcg tcactgccgc
     3901 agccggccgt cgccaacccg aacgcgatgc ccaaagcaag accactccaa actcgaaaac
     3961 cgaccaggtg cggattcctc gtcatcaaga ccctcttttg tgaaggctct aggctacccc
     4021 gaccgagcgg tcaggagggt gacgcaaaaa gcccctccag gcttcgcggc cgccccggtc
     4081 cggcgtcctg cgcgctaaat agtccctgca tgagcgaact cgaagaacgc gtgacgagct
     4141 ggttagaggc ggagctcgag gacaacctcg acgaggatta cgagctcgaa ctcggcgatt
     4201 cgccgctccg cgaagagatc gccaagatct accagggcaa accccgcccg acgctcgagc
     4261 gcggcaagta cttccgtgag ctcttgaagc tgcaatcgga gctcatcaag ctccagacct
     4321 gggtcgcgca caccggggca aagatcgtgg tgctgttcga gggccgcgat tcggccggca
     4381 agggcggggc gatcaagcgc atcacgcagc ggctgaaccc gcgcatctgc cgcgtcgtcg
     4441 cgctgcccgc gccgagcgaa cgggagaaga gccagtggta tttccagcgc tatgtaccgc
     4501 acctgcccgc ggccggcgag atcgtgctgt tcgaccgctc ctggtataac cgtgcgggcg
     4561 tcgagcgcgt gatggggttt gcgacggacg agcaagtgga gcagttcttc gacgacgcgc
     4621 cggccttcga gcacctgctc gtgcgctccg gcatcatcct cctcaagtat tggttctcga
     4681 tttcggacga agagcagcag ttgcgctttc tgacgcgcat ccacgatccc atgaagcagt
     4741 ggaagctcag tccgatggac ctagagtcac gcgtgcgttg ggaggagtac acgacggcca
     4801 aggaagagat gctcgagcgg acgcacacgc ccgacgcgcg ctggtacctc gtcgagggca
     4861 acgacaagcg cgccgcgcgc ctcaactgca tccaccactt actgcagcag gtgccctaca
     4921 cggacgtgcc gcacgacccc atcgctctgc ccgagcgcgt cttcgacccg gactacgagc
     4981 gcaagaagct cccgcgcgag atgtacgtgc cgaacgtgta cgggcaggcc gccgatgcac
     5041 gctagcgcgc gtcgatgccg ggcatgccgt caattctgct cgtaagcggg caattccagg
     5101 tcgtcccgca ccgagcgccc gacgagccgc ttggccacga aaggcagcgc gaacgcattg
     5161 acgagcacgt tgcggagcgc gaggccgagt cccgtgcggg gcacgaagaa gccacgaaat
     5221 tgcagcgccg agcgctgctt gtcacgcaag aagacgcgca gtcgtgcttc gtattccctg
     5281 agtccccgcg cccagtcgcc tccggctcga tgtagctcgc ccgccagcac gtacgcctcg
     5341 atcatcgcga gcccggtgcc ctcaccggcc aagaacgaca cgcaagccgc cgcgtcgccc
     5401 acgagcgcca cgcgtcctcg actccaggtg tcgagtcgaa tttgactgac ggcgtcgaag
     5461 tagagctcat cgacaccttc catgcgggct aaaatatcgg gaacctccca gcccatgccg
     5521 ctgaaggcac gccggagcgc ctccttcacg ttggtcccca cgctttcggc agcgagcaac
     5581 tccgagcggc aaatcaagag cacgagcgtc tggccgtcac gtagcgtcat gcgcgcgacc
     5641 tggcgcttcg gtgcggtgtg ggagacgtag gtgagctcgt cctggtgcgg gtagtgctcg
     5701 agacgaaagg cggccacatg gcagccgagc gggcgttcgt ggcgggggtc ctcgccgaag
     5761 ccgacggcgc gtacacgcga gtgcaggccg tcggcgccga ccacgagatc gaagcgctcg
     5821 tgccggccgt ccgagagcgc ggccgtgatc ccgtcggggt cctcctggaa gcccacgatc
     5881 gaggtgccga attgcacggg tacgtctcgg cacgcggcga cgagtgccgc ggcgacgtcc
     5941 gaccgcgcca cgctgatgaa acgtccgcgc aggctctcgc ggatcggttc gacttccatg
     6001 cgcgcgacct cgcggccctc ggcgtcgacc atcttcattc gttgcatcgc gtagcctcgc
     6061 tcgacgaggc cctcgaggat ccccatgcgc tcggcgagct cgtaaccgag accccagaaa
     6121 tcgatgacgt acccgccggt gcgcagcgcc ggggctttct cgaacaagac cggttcgtga
     6181 ccgaaacgct tgagccaata ggcgagcgca ggaccggcga cgccggcacc gttgatagcg
     6241 atcctcatca cggactccct tcttacgtcc tgccggcgcg ctgtcccgaa ccgctcggtc
     6301 ccggcggagc agtcgtgttc ttgagtacga ctgcgcccag gatgaagacg aacgccagca
     6361 ggcgcagcca gaaaacgtaa tggcgtgtct cgctcgtagg atgaatcact gcgagtaccg
     6421 tccagtgcag cgcgagcgtg ccgaagccga gcgcgaagcc gacgaacagc ccatcgcgag
     6481 tctgtcgcca aaatttgacg aagaatagcg cggcgatcgc gcaaagcgtc gcgatggcac
     6541 cccacagaaa atcgatcatc tctcctccag cactaagccc accacgagca gcagcagcgc
     6601 ggcgagggcg atgacggcgc gcaggatgcg caaatcgact tcgggcacca agaccaagtc
     6661 gatgaacaaa agtacgttgt tcagcgcgag gccgacgaaa caaagcgctg cgagcaacgc
     6721 gagccgcagg cgtgtacgct gatagttgcg gatcaagagc agcgcgcaaa agatgctcgc
     6781 gaaggcgcag agtacgtaag tgacttcagc cacgagactt gggtcctccg aagcgaaagc
     6841 actcggcaaa tgtgctgacg gccgcggtgc gcacacgctc gagggcgttc gccgtcaaga
     6901 gcgacatgat ctcgatcggt tgggcacggt acacttcgat cacctgattg acgcgctcgc
     6961 gcgtttccgc gtcgacgatg gcgtaacggt agcgaggcgg cgcgcccgtg ctcgcgagca
     7021 gctcgcgcga agacaggcgc cggagcgcct cctgcgtcat ttcgggcgtt agtcccgaca
     7081 gcgtcgcgat ttcgacttcg ttcaagggct cgccgtcgcg cacgtcgcgc aggcgcgcga
     7141 ggatctcgag ctctccgaga tcctcgcaat actggaatag ccagcggcgg agctcttcgc
     7201 gttcagccgc catgcggtgt tccctgagtg ccggcccccg gcgcgggggg cgcgacggca
     7261 cgctgctggt aagcctgtac gatggtctga tcatcgacgt agccgagcaa gcgccccgtc
     7321 gtatccgtaa cgggcagctc gcgtaggccg ctctccagca tgc
//
LOCUS       DATIML010000823         4938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5086847, whole genome shotgun sequence.
ACCESSION   DATIML010000823 DATIML010000000
VERSION     DATIML010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4938
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5086847"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1278
                     /locus_tag="VLJ38_14205"
     CDS             <1..1278
                     /locus_tag="VLJ38_14205"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HSU40727.1"
                     /translation="DAEKIRGDALQNYRAWIDTGGHLTNIDVGSLDALDAALAEAELV
                     VDALFGTGLDRELTGAVRDVVTHLNAAQKPILSLDLPSGLDADRGVPLGVAVCATITA
                     TFAQKKRGLCTPHGAEHAGDIRVIPIGIPDELEARVGYGAVELERADVRSLVTARGPG
                     SHKGSSGRVLILAGSPGKIGAALLVAHGALRAGGGLVTLAGEPGTASVFEQRVLEAMT
                     ARLDPAAPERSLDALLEKTDVVALGPGLGFDAFARRVVDHVALGWSGRVVLDADGITS
                     FAERSGELVKARGKLVLTPHPGELARLLGGTVAEIEADRFGAVERAVARTGQTVLLKG
                     ASTLVAAPGEKISVNPTGNALLATGGAGDVLCGVIAALLVGSDPYRAARAGAYLHGAA
                     ADLLATELAVERGVLAHEVGDAVPRAFAAALAR"
     gene            1412..2359
                     /locus_tag="VLJ38_14210"
     CDS             1412..2359
                     /locus_tag="VLJ38_14210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40728.1"
                     /translation="MSVLSVLGLPAASDDATPIRIELDAPADCATAEGFYEAVRARTE
                     RARTVKEGESGVRVVVRLTRVGTRAHGELRVIGERGESDTRRVDGTSCTEVVAALSLT
                     VALAVDPTARLGPLERSPEKPPAPVCPRCEPPPPPPPPPPAPELEVRVGAHLLGMGQV
                     SPYMSFGADVSVRVIAPWSSASSLGLAIAYVRNDLFATTHEASIGSTLFQLTGCPKRF
                     GARDTFTFEPCLVGMGGWLHAEGRGLDTTTDVTRSYFAAGALFIGSAPLNTHFQLEVQ
                     AGFVFPLIKRHFTVSEPPREVGGTPDVSGIVGLGVAYSF"
     gene            2498..3178
                     /locus_tag="VLJ38_14215"
     CDS             2498..3178
                     /locus_tag="VLJ38_14215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU40729.1"
                     /translation="MIKTSPPGNNPHGSEMPDPSGSSEAVMGGAVVAGVLPGGRPLVE
                     SEIKSTVRATDREARLRWMVDEYIDFVARVLRNAGTPAAEVDDDVQRTFIAAARRLDD
                     VRPGAERSFLLQTALYVAAHARRTLARRREVAAEEAPEQIDSALTPEQLTDQKRARET
                     LDRVLSVMDADLRTVFVLYEFEELSMAEIADALSIPRGTVASRLRRARADFRDRVRAL
                     GGIGRLQK"
     gene            3175..3888
                     /locus_tag="VLJ38_14220"
     CDS             3175..3888
                     /locus_tag="VLJ38_14220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40730.1"
                     /translation="MNEPRRLRDEAESPVELLLLEAGVAYRSSADARAKTLAALGLVG
                     SAAVSAGAISAASSSLVTKVGVGWSKLLLISSLGAGVVAPVGYLTWNRLHSGREESAK
                     VVAAPPTTPPAAVVARTPPAVEAPPTGVSFDELPAPVVKPEAKPSSPAGDLAAELGAL
                     DVARSELAAGDANGALAKLDDYSRLYPRGRLVLEAEVLRIDALAKSGQTDVAKKRAEA
                     FLRRHPNSVLASRVRAFLD"
     gene            4071..>4938
                     /locus_tag="VLJ38_14225"
     CDS             4071..>4938
                     /locus_tag="VLJ38_14225"
                     /inference="COORDINATES: protein motif:HMM:NF013438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 8"
                     /protein_id="HSU40731.1"
                     /translation="MGGTQVPQSLAPLRGPDTYDNPFKDVLANLQLTDKDIDDKVEEA
                     FQQLFHGSVTGDINDPTNEAIFFPVIGAEDEAYIYDVYHRDVRTEGLGLGMLIAVELD
                     HQPEFDQLWNYAKREKQASGASRGYYNSRCDQTSTVALQCLDPYGLQMFAMALVFAHD
                     RWRTSALGNIDYEADALGLLDVMLNKERANGGIVDGVTNTFDAETSLVFDEPKTTAAS
                     RTRPSILMPAFYELWAQATGNAIFSAAADASRAFFVSVEQAAPTTGLMPLRAYFDGTP
                     VPGSDTFQAETYR"
BASE COUNT          757 a         1669 c         1684 g          828 t
ORIGIN      
        1 gacgccgaga agatccgagg cgatgcgctc caaaactacc gcgcctggat cgacacgggc
       61 ggtcacctca cgaacatcga cgtcggctcg ctcgacgcgc tcgacgccgc cctcgccgaa
      121 gccgagctcg tcgtggacgc cctgttcggc acgggcctcg accgcgagct cacgggcgcc
      181 gtgcgcgacg tcgtcacgca cctgaacgcc gcgcaaaagc cgatcttgtc gcttgatttg
      241 ccgtcggggc tcgacgccga ccgcggtgtt ccgctcggcg tcgcggtgtg cgcgacgatc
      301 accgcgacat ttgcgcagaa gaagcgcggc ttgtgcacgc cgcacggcgc cgagcacgcg
      361 ggcgacatcc gagtcatccc catcggcatc cccgacgagc tcgaggcgcg cgtcggctac
      421 ggcgcggtcg agctcgagcg cgccgacgtg cgctcgctcg tcacggcgcg cggtccgggc
      481 tcgcacaaag gttcctcggg gcgcgtgttg attctcgccg gatcgcccgg caaaatcggc
      541 gcggcgctct tggtggcgca cggcgcgctg cgcgcgggcg gcggtctcgt gacgctcgcg
      601 ggcgagcccg gcacggcgag cgtcttcgaa caacgcgtgc tcgaggccat gacggcgcgc
      661 ctcgaccccg cagcgcccga gcgctcgctc gacgcgttgc tcgaaaagac ggacgtggtc
      721 gcgctcggtc ccggcctcgg cttcgacgcg ttcgcgcgcc gtgtagtcga tcacgtggcg
      781 ctcggctggt cgggccgcgt cgtgctcgac gccgacggca tcacgagctt cgccgagcgc
      841 tcgggtgagc tcgtgaaggc gcgcggcaag ctcgtgctca cgccgcaccc cggggagctg
      901 gcgcgtctgc tcggcggcac ggtggcggaa atcgaagccg atcgcttcgg cgccgtcgag
      961 cgcgccgtcg cacgcaccgg tcaaaccgtg ctcttgaagg gtgcctcgac gctcgtcgcg
     1021 gcaccgggcg aaaagatcag cgtgaatccg acgggcaacg cgctgctcgc gaccggtggc
     1081 gcgggcgacg tgctctgcgg cgtgattgct gcgctgctcg tcggctcgga cccgtatcgc
     1141 gccgcccgcg caggcgcgta tttgcacggc gccgcggcgg acctcttggc gacggagctc
     1201 gcggtcgagc gcggggtttt ggcgcacgag gtcggcgacg ccgtgccgcg agccttcgcc
     1261 gccgcgctcg cgcgctgacg cgccgttcgg ccgggtcgcg agccacgcgg cgtcgtcccc
     1321 cgccgtgcga cagcggtcgg cgcgagggcg ctggcgctcg tcgcgcgggc atgcgaccgt
     1381 gtcgtgcgtg atcttaggtg gcggcgtcgc gttgagcgtt ctcagcgtcc tcggattgcc
     1441 cgcagcttct gacgacgcga cgccgatccg catcgagctc gacgcgcccg ccgattgcgc
     1501 gacggccgaa gggttttacg aggcggtccg cgcgcgcacc gaacgcgccc ggaccgtgaa
     1561 agaaggcgaa agcggcgtgc gcgtcgtcgt acggctcacg cgtgtcggta ctcgcgcgca
     1621 cggcgagctg cgcgtcatcg gcgaacgggg tgagagcgac acgcggcgcg tcgacggcac
     1681 gagctgcacg gaagtcgtcg ctgcgctttc tctcaccgtg gcgctcgccg tcgatcccac
     1741 cgcacggctc ggccccctcg aacggtcgcc cgaaaagcca cctgcgcccg tgtgtccgag
     1801 atgcgagccg ccaccgccac cgccgccacc gccgccagca cctgagctcg aagtgcgggt
     1861 cggcgcgcac ctgctcggta tgggtcaggt gtcgccctac atgagcttcg gcgccgacgt
     1921 ctccgtgcgt gtgattgcgc cctggagctc ggcgtcctcc ctcgggcttg ccatcgcgta
     1981 cgtcagaaac gacttgttcg cgaccaccca cgaagcctca atcggctcga cgctctttca
     2041 gctcactggt tgtccgaagc gcttcggcgc gcgcgacacg ttcacgttcg agccgtgctt
     2101 ggtcggtatg ggcggttggc ttcacgccga aggacgcggc ctcgacacca cgacggacgt
     2161 gacgcgctcg tatttcgcag cgggggcgct gttcatcggt agcgcaccct tgaacaccca
     2221 ttttcagctc gaggtccaag ctgggttcgt gttcccgctc atcaagcggc acttcacggt
     2281 ctcggagccg ccgcgcgagg tgggtgggac cccggacgtg tcgggcatcg tcgggctcgg
     2341 cgtggcgtac tcgttttagc tcgcgttccc tcgacccgcg gcgcaggtcg cagatcgcag
     2401 cacggatttg gcgctttcct gcgaagaacg acccgtttgg cctagtcgtg gcagaatagg
     2461 gcccccacgg tccgcgcgta cggatcggcg acccccgatg atcaagacgt ccccacccgg
     2521 gaataatccg cacgggagcg agatgcccga tcccagcggc tcgtctgaag cggtcatggg
     2581 cggagctgtc gttgccggag tgttgccggg agggcggccg ctggtcgaat cggagatcaa
     2641 gtccacggtg agagccaccg atcgcgaggc ccgccttcgc tggatggtcg acgaatacat
     2701 cgatttcgtc gcgcgagtgc tgcgtaacgc cggcacgccc gctgctgaag tcgatgacga
     2761 cgtgcagcga acgttcatcg cggcggcgcg ccggctcgac gacgtgcgtc ccggcgcgga
     2821 acgcagcttt ttgttacaga ccgcattgta cgttgcggcg cacgcgcgtc gcacgctggc
     2881 tcgccggcgt gaagtcgccg cggaggaagc gcccgagcaa atcgactcgg cgctcacgcc
     2941 ggaacaactg acggaccaaa agcgtgcccg agaaacgctg gaccgggtac tttccgtcat
     3001 ggacgcggat ttgcgcaccg ttttcgtgct ttatgagttc gaagagctca gcatggccga
     3061 gatcgcggac gcgctttcca tcccgcgcgg aacggtggcg tcgcgtcttc ggcgcgcccg
     3121 ggccgatttt cgtgatcggg tccgggcatt agggggaatt ggaaggttac agaaatgaat
     3181 gagccgcgtc gtcttcgcga cgaagccgag agtccagtcg agctgttact gctcgaagcc
     3241 ggcgtggctt accgcagctc ggcggacgcg cgcgccaaga cgctggcggc gctcggcctg
     3301 gtgggctccg cggccgtttc tgcgggcgca atcagtgctg cgagctcctc gctcgttacg
     3361 aaggtcggcg tcggttggag caagctcctg ctgatttcga gcctcggagc aggcgttgtc
     3421 gcgcctgtcg gctacctgac ctggaaccga ttgcactcag gtagggaaga aagcgccaaa
     3481 gtggttgcag ctccccctac cacccccccg gccgcggtcg tggcgcgcac cccgccagcc
     3541 gtcgaggcgc cacccaccgg ggtgtcgttc gacgagctcc ccgcgcccgt cgtcaaacca
     3601 gaagcgaaac cgtcgtcgcc ggcgggcgat ctcgcggccg agctcggcgc gctcgatgtc
     3661 gctcggtcgg agcttgctgc gggcgacgcg aacggcgcgc tcgcgaagct cgacgactat
     3721 tcacgactct acccgcgcgg tcggctcgtg ctcgaagccg aggtgctgcg catcgacgcg
     3781 ctcgcgaaga gcggtcaaac ggacgttgcg aagaagcgcg cagaagcgtt cctgcggcgc
     3841 catccgaaca gcgtgctcgc ctcgcgcgtg cgcgcgtttt tggattgagg tgtccgcggg
     3901 cgctccgcgc gaggagcggt cgtatgtcta aaagctgcta cgtttggcgc gtgcctttcg
     3961 gccgctctgc acactcgttt tgccgtctcg gattgctcgc tggcgcgctc gggctcagca
     4021 cggggtgcac ttcgagcgta gattcgctgg gccgcgacaa ggctacggcc gtgggcggca
     4081 cgcaggtgcc gcagtcgctc gcgccgctgc gcgggccgga cacgtacgac aacccgttca
     4141 aagacgtgct cgccaacctg caactcaccg acaaggacat cgacgacaag gtggaagaag
     4201 cgtttcagca gctctttcac ggcagcgtca cgggcgacat caatgacccc acgaacgagg
     4261 ccatcttctt ccctgtcatc ggtgcggagg atgaggctta catctacgat gtctaccatc
     4321 gcgacgttcg caccgagggc ctaggcctcg gaatgttgat cgcggtcgag ctcgatcatc
     4381 agcctgagtt cgaccagcta tggaattacg ccaaacgcga gaagcaagcg tcgggcgcga
     4441 gccgcggcta ctacaactcg cgttgcgatc agacgagcac cgtcgctctg cagtgcctag
     4501 atccatacgg gctccaaatg ttcgcgatgg cgctcgtctt cgcgcacgac cgctggcgca
     4561 caagcgcgct cggaaacatc gattacgaag cggacgctct cggccttttg gacgtgatgc
     4621 tgaacaagga gcgggcaaac ggcggtatcg tcgatggcgt cacgaacacg ttcgacgcgg
     4681 agacatcgct cgtgttcgac gagccgaaga cgaccgccgc gtcgcgcacg cggccctcaa
     4741 tcttgatgcc ggccttctac gaactttggg cgcaggcgac cggcaatgcg atcttttctg
     4801 cggctgccga cgcatcacgc gcgttcttcg tcagcgtcga gcaggcggcg ccgaccacgg
     4861 ggctgatgcc gcttcgtgct tacttcgacg ggacgcccgt tccgggctcc gacaccttcc
     4921 aggcggagac ctatcggg
//
LOCUS       DATIML010000824         2489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_753829, whole genome shotgun sequence.
ACCESSION   DATIML010000824 DATIML010000000
VERSION     DATIML010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_753829"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..>2489
                     /locus_tag="VLJ38_14230"
     CDS             151..>2489
                     /locus_tag="VLJ38_14230"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA
                     hydratase family protein"
                     /protein_id="HSU40732.1"
                     /translation="MSHFVVRKIAVLGAGVMGAQIAAHAVNAKVEVLLFDLPAPQGPK
                     NGIVLGAVERLKKLSPAPLVNEEDAISIEAANYEENLERLRECDLVIEAIAERLDLKH
                     ALYQKVAPFVAPHAIFATNTSGLPIAKLAEGLPPELLSRFCGVHFFNPPRYMHLVELI
                     AGARTEPKILDELESFLTTVLGKGVVRAFDTPNFIANRVGTFSILAVMAEAERYGLTL
                     DVVDDLVGTRLGRAKSGVFRTADVVGLDTLGHVIGTMRDTLKDDPFHALYAVPPMLAR
                     LIEQGALGQKTGAGFYQKIGKDILRADPATGSYVPATGKADEQVVGILKQKDPAERLR
                     LLRESEHPQARFLWAILRDEFHYAAVHLASIANSARDVDFALRWGFGWTLGPFETWQA
                     AGWDKVAGFVKADIESGAALNRAPLPEWVSAPEVSAARGVHTPQGSFSPRARAFVPRS
                     ELPVYRRQVFRAPLLGESAGPERAGRTLFEDDSVRAWALDDDALILSLKTKMHVIGAG
                     VTAGVARAVEEAEKNFRALVVWSPGEPFSAGADLKGMMPVFMSSGVRGIEQMERELQD
                     ALLRVRYAQVPVVAALAGLALGGGCELALACARRVAHVESYVGLVEVGVGLVPGAGGL
                     LYGARRAAEENALAPDVPPLAFLKKYFMNAAMANVSKSAFEAQRMGYLLPSDPVVFNT
                     HELLGAALAVAKSMAVSGYRPPLKLKGFRVAGRSATATILSQLVNLREGGFISEHDFY
                     LGQTIATILCGGDVEPGSLVDEAWVLGLERKAFTSLLMHP"
BASE COUNT          377 a          801 c          879 g          432 t
ORIGIN      
        1 cggacgttat acgcgacgcg gcggctttca ttggcttgcc cagcgtattc agcgcgcacg
       61 tccgcaccat ggccattcta cgggctgcgg ccgtgcgcgc gcctcgacgg atgctgctaa
      121 gctcgcctgc ctgagccagg gagaaaccgc gtgagccact tcgtcgttcg aaaaatcgca
      181 gtgctcggcg ccggcgtcat gggggcgcag atcgcggcgc atgccgtcaa cgccaaggtc
      241 gaggtgttgc tcttcgacct gccggcgccg caagggccga agaacgggat cgtgctcggc
      301 gcggtagaac ggctgaagaa gctgagcccg gcgccgctcg tgaacgagga ggacgccatc
      361 tctatcgagg ccgccaacta cgaggagaac ctcgagcggc tccgcgagtg tgatctggtg
      421 atcgaggcca tcgccgaacg gctcgatctg aagcacgcgc tctatcagaa ggtcgcgccg
      481 ttcgtcgcgc cgcacgcgat tttcgcgacg aacacgtcgg gcctgccgat cgcgaagctt
      541 gccgaagggc tgccgccaga gctcttgtcg cgtttttgcg gcgtgcattt cttcaatccg
      601 ccccgctaca tgcacttggt cgagctgatc gcgggagctc ggacggaacc gaagatcctc
      661 gacgagctcg agtccttttt gaccacggtg ctcggcaagg gggtcgtgcg ggcgttcgat
      721 acgccgaact tcatcgccaa ccgcgtgggt acgttctcga tcctggcggt gatggcggag
      781 gccgagcgtt acgggctcac gctcgatgtg gtggacgatc tcgtcggcac ccggctcggg
      841 cgcgccaagt ccggtgtgtt ccgcaccgcg gacgtcgtcg gcctcgacac gctcggacac
      901 gtgatcggca ccatgcggga cacgctgaag gacgatccat tccacgcgct ttacgccgtc
      961 ccgccgatgc tcgctcgctt gatcgagcag ggcgcgctcg ggcagaagac cggcgccggc
     1021 ttctaccaga agatcggtaa ggacatcctg cgcgccgatc cggcgacggg tagctacgtg
     1081 cccgcgacgg gcaaagccga cgagcaggtc gtcggcattt tgaagcagaa ggatcccgcg
     1141 gaacggctgc ggctcttgcg cgagtccgag cacccgcaag cgcgcttttt atgggcgatc
     1201 ttgcgtgacg agtttcacta cgccgccgtg catttggcct cgatcgccaa tagtgcgcgt
     1261 gacgtggact tcgcgctgcg ctggggcttc ggctggacgc tcgggccgtt cgagacgtgg
     1321 caagcggccg gctgggataa agttgcgggc ttcgtgaagg ccgacatcga gtcgggggcc
     1381 gccctcaacc gcgcgccgct cccggagtgg gtgtcggcgc cggaggtgag cgctgcgcgc
     1441 ggcgtgcaca cgccgcaagg ctcgttttcg ccgcgcgcgc gggcgttcgt gccgcgctcg
     1501 gagctccccg tgtaccggcg tcaggtgttt cgcgctccgt tgctcggcga gagcgcgggg
     1561 ccggagcgcg cggggcgcac gctgttcgag gacgattccg tgcgagcctg ggcgctcgat
     1621 gacgacgcac tgattctctc gctcaagacg aagatgcacg tcatcggcgc gggcgtgacg
     1681 gcgggcgtcg cgcgcgccgt cgaggaggcg gagaagaact tccgtgcgct cgtcgtgtgg
     1741 agtcccggtg agccgttttc ggccggcgcc gacctcaagg gcatgatgcc cgtgttcatg
     1801 tcgagcggcg tgcgcggcat cgagcagatg gagcgggagc tgcaggacgc gctgctcagg
     1861 gtgcgttatg cgcaggtgcc cgtggtcgcg gccctcgcgg ggctcgcgct cggcggcggg
     1921 tgtgagcttg cgctcgcgtg cgcccggcgt gtggcgcatg tcgaaagcta cgtcgggctc
     1981 gtcgaagtgg gcgtcgggct cgtgccgggc gccggcggtc tcctctacgg ggctcggcgt
     2041 gccgcggaag aaaatgcgct cgcacccgac gtgccgccgc tcgcgttcct caagaagtac
     2101 ttcatgaacg cggccatggc gaacgtctcg aaatcggcgt tcgaggcgca acgcatgggc
     2161 tatctgctgc cgagcgaccc ggtcgtcttc aacacgcacg agctcctggg cgctgcgctg
     2221 gctgtagcca agagcatggc ggtatccggc taccgcccgc cgctcaagct caagggcttc
     2281 cgcgtcgcgg ggcgcagcgc gacggcgacg atcctgtccc agctcgtgaa cctgcgcgaa
     2341 ggcgggttca tctccgagca cgatttttac ctcggccaaa ccatcgcgac catcctgtgc
     2401 ggcggcgacg tggagcccgg cagcctcgtc gacgaagcct gggtcctcgg gctcgagcgc
     2461 aaggcgttca cgagcctgct catgcaccc
//
LOCUS       DATIML010000825         8907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_754206, whole genome shotgun sequence.
ACCESSION   DATIML010000825 DATIML010000000
VERSION     DATIML010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8907
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_754206"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..672
                     /locus_tag="VLJ38_14235"
     CDS             <1..672
                     /locus_tag="VLJ38_14235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40733.1"
                     /translation="PAAAAQIAAAPAAPEAVLGPTPATCPKGMQPAPDGLFDDFEDGT
                     NQVALVGGRNGYWWLAKAEHASVSIPGPEFRTVDGGPKGSKKTAHFAGKTDAQDVWGA
                     SLGGNFLGGSFYDASRYAGVSFELKGKAKSFLRFKLHDVNTHPDGSICSKDCWNAFGK
                     TIELKSDWQHVELAFADLRQLEGWGSPRPPFVNTAKVKHLEWSVDQGEDFDFWLDDVK
                     LLVCK"
     gene            complement(884..2101)
                     /locus_tag="VLJ38_14240"
     CDS             complement(884..2101)
                     /locus_tag="VLJ38_14240"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 5 protein"
                     /protein_id="HSU40734.1"
                     /translation="MLWFCVVACQASQTAAPPPCPPLNPAPAVAAVAVAAAPTPALPD
                     KPVAAPLDKNLARPDVIARSAPLPGFMKGINLGNCLDAPAEGAWGTTISEKHFEMAAA
                     AGFDHVRLPTRFSAPERADVKPPYTVNPEFLKRVDWAVDQALAHHLSVIVDFHHFAEM
                     NSDPNANKARFYAIWRQVAAHLAKRPPEVAFEILNEPTDKLEPKLLNEITRETLKLIR
                     AKNPTRIVFADSYFWANARRLAELELPKDPNVVAQFHLYEPILFTHQGAPWMDSSYQT
                     RGILFPGPPAAPVTPVPDAAKSGWVAEWFNGYNTKPLAENPGGPKTVFEYFDLAANYV
                     KATGNRVYLGEFGAIDNADAQSRENYVWLVRTEAERRGIGWAYWDDGGSFKAMNTYAG
                     TWNEGLRRALLDK"
     gene            complement(2173..3372)
                     /locus_tag="VLJ38_14245"
     CDS             complement(2173..3372)
                     /locus_tag="VLJ38_14245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSU40735.1"
                     /translation="MSYFVPASWAAWLVVVASGWAFRSRAYAVYRAVTLGLQVLIASA
                     LVRYFAWAFPAVAYLEAMVFLSSLVLIRPRLRGLPYRALVSVPAAFFGAGTLLAAPWA
                     VVAAFGFTPHGAWLPYLFAAIGIVQSLTTREEATDVVVADGEHVEGLRRHAASELRVE
                     RPLQVLQITDPHLGPFMSVARLRRICERAVARAPDLVVLTGDFLTMESHERPDLLAAA
                     LAPLKALEGRTFACLGNHDHEALATVEQALAAAGVKLLVDRAAEVVTPAGLVQILGFD
                     FVWRGRAEHLARVTAAHPRKAGALRLLLLHDPSAFHHLPAGEGDLVLSGHTHGGQVGF
                     VSLGLPWTLMRAFVSAPDHGLWARGVDRLYVHRGTGHYGFPLRLGVPSEESVLRVHAG
                     TLAAVTA"
     gene            3398..4255
                     /locus_tag="VLJ38_14250"
     CDS             3398..4255
                     /locus_tag="VLJ38_14250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU40736.1"
                     /translation="MTQVDDRVRVAPPMRQADLSGKVLLVTGASAGIGAACAREAVQR
                     GANVVLVARRAERVAALAAELGSSALGVAGDVTRDGDIARAVALGRERFGGLDVLLAN
                     AGFGVSGDFVSLTLDDYRRQFETNVFGAMRSLYEALPELEKRRGAVGVVGSVNGYVSI
                     PGWSAYCMSKHALRSFCASVRLELRERGVSVTHLAPGFVETEFRRVDNANKHHPDVSD
                     PTPSFLLLSAERAAREMLDATVARRAEAVITLHGKAAVGLARHTPGVVSLALSLGGDI
                     TRRLSKRPA"
     gene            complement(4260..5993)
                     /locus_tag="VLJ38_14255"
     CDS             complement(4260..5993)
                     /locus_tag="VLJ38_14255"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40737.1"
                     /translation="MPPGAEKSEQPHAGAQAAGPTHLEPLRSDDPDVSVGWNEMEAVR
                     AAASRELPADLLREGVGRLRGLTLVAAAVLAVYLAALALFVPSTPEWLRMRGGCLTLL
                     GVGTGLSLAAHGMTRIAKLRPQHAHDLGYAYLIVLSLLLGLLRHAGGWPAAELVRQVS
                     PVVVPIIAFGALIPASPRTAVGTLFGAACMDPLAFVIARSGDPTPPPGDLLLLFSSPF
                     VAAFVAYAISRVVHRLSEGIVKAREVGSYRLVERLGVGGMAEVWRAEHRLLARPAAVK
                     LIRPKILVDHGPLEAERLLRLFLREARTTASLDSPHTIALYDFGTTREGAFYYVMELL
                     HGLDLKTLIDRFGPQTPERAAYLLTQVCHSLAEAHDRNFVHRDVKPANIFTCELGGDV
                     DFVKVLDFGLVLDRHPTAEELEDERRFVGTPAIMAPEMVRFQAPVDRRADLYAVGCVG
                     YWLITGKRVFEAETRHDMLVMHAHQRPVTPSVRIGKPIHAGLEAVIMACLEKNPDRRP
                     QTARELRERLNALSFEHPWSDERAALWWKRYRPMAADVTPARPSEPPAASTPEPSPPG
                     REATDSVETNA"
     gene            6242..7672
                     /locus_tag="VLJ38_14260"
     CDS             6242..7672
                     /locus_tag="VLJ38_14260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HSU40738.1"
                     /translation="MLALPAPNARADEPTPTAAAAPAAAAPAAVPSDVEKRLADLEAY
                     VTNGARADDKTSKITSPGPGHNGFMMICAALVLFMTLPGLALFYGGLVRQKNVLSIMA
                     QCMGIAALVTLLWWAFGYSLAFAPGTPFIGGMANAMLKDVGMAPNTAYAGWVSQSTFS
                     MYQLMFAIITPALIIGSIAERVKFSALLIFVTAWMVLIYFPLAHMVWGADGFMNGVWN
                     KDAGIKAIDFAGGTVVHMSSGWSALVLALIVGKRVGFGKEEFIPHSLVLTMVGTGMLW
                     VGWYGFNAGSAVAADGIAAQAFMTTTLAAAVAGGAWAGVEWLTRGKPSVLGFCSGIVG
                     GLVVITPAAGFVSANGAMLIGILAGVVPYFACTKLKHALGYDDALDTFGVHAVGGTLG
                     AFLTGLLATPDANPNLLTNLKDIVGKTLWVEQLKAMGLTLALSIIGTAVLGYALKLTI
                     GLRPSAEEEESGLDVSGHGEKGYNVS"
     gene            complement(7783..8013)
                     /locus_tag="VLJ38_14265"
     CDS             complement(7783..8013)
                     /locus_tag="VLJ38_14265"
                     /inference="COORDINATES: protein motif:HMM:NF016230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSU40739.1"
                     /translation="MIVCHCRAVSDRAIRASIRDGATTIEAVCAVTGASGCCGGCEPM
                     VSDILDEELGARPISSIGDRRPLRIVNDPRAA"
     gene            8233..8703
                     /gene="bfr"
                     /locus_tag="VLJ38_14270"
     CDS             8233..8703
                     /gene="bfr"
                     /locus_tag="VLJ38_14270"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HSU40740.1"
                     /translation="MQGDAEIIELLNEVLTSELTAINQYFIHAKMLKNQGYDRLAKKK
                     REESIEEMHHADAIIERILFLDGVPNMQRLFPVRVGEEPVEMHRVDLAVEKEAHARLN
                     RGIALAVAKGDNGTRALLESILKSEEESIDWLETHLGLIQELGRERYLAEQMHE"
     gene            8758..>8907
                     /locus_tag="VLJ38_14275"
     CDS             8758..>8907
                     /locus_tag="VLJ38_14275"
                     /inference="COORDINATES: protein motif:HMM:NF045213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HSU40741.1"
                     /translation="MSGHSKWATIKRKKGATDQARGRIWTKLIREVVTAARIGGGDQD
                     GNPRLL"
BASE COUNT         1541 a         2915 c         3020 g         1431 t
ORIGIN      
        1 cccgctgccg ccgctcagat cgcggctgcg ccggccgcgc ccgaggccgt cctcgggccc
       61 acgccggcca cgtgtccaaa gggcatgcag cccgcacctg acggactgtt cgacgacttc
      121 gaggacggca cgaaccaagt cgccctcgtc ggcggtcgta acggctattg gtggctcgcc
      181 aaagcggagc acgccagtgt ctcgatcccc ggcccggagt tccggacggt cgacggcggg
      241 cccaaaggct cgaaaaaaac cgcgcacttc gcgggcaaga cggacgcaca ggacgtgtgg
      301 ggcgcctcgc tcggcggtaa cttcctcggc ggcagctttt acgatgcttc gagatacgcc
      361 ggtgtctcct tcgagctcaa gggcaaggca aaatcatttt tgcgcttcaa gctgcacgac
      421 gtgaacacgc acccggacgg cagtatttgc agcaaggact gctggaacgc tttcggcaaa
      481 acgatcgagc tcaaaagcga ctggcaacac gtcgagctcg cgttcgcaga cctccgccag
      541 ctcgagggct ggggcagccc gcgcccgccg ttcgtcaaca cggcgaaggt gaaacacctc
      601 gagtggtcgg tcgaccaggg ggaagacttc gacttctggc tcgatgacgt gaagctgctc
      661 gtctgcaagt agtactactg ccgaaaatct tggaagaaca gatcgcgatc ggcaagtgag
      721 accacgcgcc acgcgagtgc tctggcgcag ccaacgccgg ctgcttttga gcatggctcg
      781 agacgcaggg cgcatccgcc gaactccgga aaacgagacg cggcgattgc gcaaaatccc
      841 cggagaaaac gcaaattggc ggcagtagtg gtaggcgcgg actctacttg tcgagtagcg
      901 cgcggcgcag gccctcattc caggtgcccg cgtaggtgtt catcgctttg aagcttccgc
      961 cgtcgtccca gtacgcccag ccgatgcctc gccgttcggc ttccgtgcgc acgagccaga
     1021 cgtagttttc acgcgactgt gcgtccgcgt tgtcgatggc gccgaattct ccgaggtaca
     1081 cgcggttacc cgtcgctttg acgtagttcg cggccaagtc gaagtactcg aagacggtct
     1141 tggggccgcc cgggttttcg gcgagcggct tcgtgttgta gccgttgaac cactcggcga
     1201 cccaccccga cttggccgcg tcggggacgg gagtcacggg cgcggctggg ggccccggga
     1261 acaggatgcc gcgcgtctgg tagctcgagt ccatccacgg cgcgccttgg tgcgtgaaga
     1321 ggatcggttc gtagaggtga aactgcgcga cgacattcgg atccttgggt aactcgagct
     1381 cggcgagccg ccgggcgttg gcccagaagt acgaatccgc gaacacgata cgcgtcgggt
     1441 tcttcgcgcg gatgagcttc agagtctcgc gcgtgatttc gttcaagagc ttgggctcga
     1501 gcttgtcggt cggctcgttc aggatttcga acgcgacttc gggcgggcgc ttggcgagat
     1561 gcgccgcgac ttgccgccaa atcgcgtaaa agcgggcctt gttggcgttc ggatcgctgt
     1621 tcatctcggc gaagtgatga aaatcgacga tgacgctcag gtgatgagcg agcgcttgat
     1681 cgaccgccca atcgacgcgc ttcaagaatt cgggattcac cgtatacggc ggcttgacgt
     1741 ccgcgcgctc gggcgcgctg aagcgcgtgg gcaagcggac atgatcgaag ccggcggccg
     1801 ccgccatctc gaaatgcttt tcgctgatgg tggtgcccca ggcgccctcg gcgggcgcgt
     1861 ccaggcagtt gccgaggttg atgcccttca tgaagccggg caggggcgcc gagcgcgcga
     1921 tcacgtcggg gcgcgcgagg ttcttgtcga gcggtgccgc gacgggcttg tccggcaagg
     1981 ccggagtcgg cgcggctgct acggcgaccg ccgctacggc tggcgccggg ttcagcgggg
     2041 gacaaggcgg aggcgccgcc gtctgcgacg cctgacaagc gacgacacaa aaccacagca
     2101 ccaaggagga gcgcttccag ttccgcatac cggtcggcat cctagggccg actcaagcag
     2161 tcttggaaga ctttatgccg ttacagcggc cagggttccg gcgtgcacgc gcagcacgct
     2221 ctcctccgac gggacgccga ggcgcaacgg gaagccgtag tgcccggtcc cgcggtgaac
     2281 gtacagtcga tcgacgccgc gtgcccacag cccatggtcg ggcgcgctca cgaaggcacg
     2341 catcaaagtc cacggcagtc cgaggctcac gaagccgacc tgcccgccgt gggtgtgccc
     2401 ggagagcacg agatcgcctt cgcccgcggg caggtgatgg aacgcgctcg gatcgtgcag
     2461 gagcagcagc ctgagcgcgc cggctttgcg cgggtgagcg gccgtgacgc gcgccagatg
     2521 ttcggcgcgc ccgcgccaaa cgaaatcgaa ccccaggatt tgcacgagcc cggcgggtgt
     2581 cacgacctcc gcggcccggt cgaccagcag tttcacgccg gcggctgcga gcgcctgctc
     2641 gacggtagcg agcgcttcgt gatcgtggtt gcccaggcac gcgaaggtgc gcccttcgag
     2701 cgccttgagc ggcgcgagcg cggcagcgag caagtccggc cgctcgtgag actccatcgt
     2761 gagaaagtcg cccgtcaaca cgaccagatc cggcgcgcgc gcgaccgcgc gctcacaaat
     2821 gcggcgcagt cgcgcgacgg acatgaaggg ccccaggtgc ggatcggtga tttgaagcac
     2881 ctggagcggc cgctcgacgc gcagctcgct tgctgcgtgg cgccggaggc cctcgacgtg
     2941 ctcgccgtcg gcgacgacca cgtccgtcgc ctcttctcgc gtggtcaatg actgtacgat
     3001 gccgatcgcc gcgaagagat acgggagcca ggcgccgtgc ggagtgaagc cgaacgccgc
     3061 gacgacggcc cacggcgcgg cgagcagcgt gcctgcgccg aagaatgcgg ccggcacgct
     3121 cacgagcgcc cgatacggta ggccgcgcaa gcgcggccga atcaagacga gggagctcag
     3181 aaagaccatc gcttcgaggt aagcgacggc cggaaacgcc cacgcgaagt agcgcacgag
     3241 cgcgctcgcg atcagcacct gcaacccgag cgtcacggcg cggtagacgg cgtaggcgcg
     3301 gctcctgaac gcccaaccgc tcgcgaccac gacaagccag gcggcccacg aggccggcac
     3361 gaagtaactc accttctagc aataagcccg aagcggcgtg acgcaagtag acgaccgtgt
     3421 cagggtcgcg ccgcccatgc gtcaggcgga tctcagcgga aaagtgctgc tcgtcacggg
     3481 cgcgtcggcg gggatcggcg cggcatgcgc gcgcgaggcc gtccagcgcg gcgcgaacgt
     3541 cgtgctcgtg gcgcgccggg cggagcgcgt ggcggcgctc gcggccgagc tcggctcctc
     3601 cgcgctcgga gtcgccgggg acgtgacgcg tgacggcgac atcgcgcgcg cggtcgcgct
     3661 cgggcgcgag cgcttcggcg ggctcgacgt gctgctcgcg aacgcgggct tcggcgtgtc
     3721 gggcgacttc gtctcgctca cgctcgacga ctaccgccgc caattcgaga ccaacgtgtt
     3781 cggtgccatg cgctcgctct acgaggcgtt gcccgagctc gaaaagcggc gcggcgccgt
     3841 gggcgtggtc ggcagcgtga acggctacgt ctcgattccg ggctggtcgg cctactgcat
     3901 gagcaagcac gcgctacgct cgttttgtgc ttcggtgcgg ctcgagctcc gcgagcgcgg
     3961 cgtgtcggtg acgcacctgg cgcccggctt cgtggaaacg gagttccggc gtgtcgacaa
     4021 cgcgaacaag caccatccgg acgtgtccga tcccacgccc tcgtttctgc tgctgtccgc
     4081 cgaacgcgcg gcgcgcgaga tgctcgacgc cacggtcgcg cgtcgcgccg aagccgtgat
     4141 cacgctccac ggcaaagcgg ccgtcggtct cgcgcgtcac acgccgggcg tcgtgtcgct
     4201 cgcgctctcg ctcggcggcg acatcacgcg ccggctctcg aagcgcccgg cgtagggcgt
     4261 caggcgttcg tttcgacgct gtccgtggcc tcccgaccgg gcgggctcgg ctccggcgtc
     4321 gatgcggccg ggggttcgct cgggcgtgcg ggcgtcacgt cggcggccat cggccgatac
     4381 cgcttccacc agagcgcggc tcgctcgtcg ctccaaggat gctcgaagct cagggcattg
     4441 agccgctcgc ggagctcgcg cgcggtctgc ggcctccgat cggggttctt ctcgaggcac
     4501 gccatgatca ccgcttcgag cccggcgtga atcggcttgc cgatgcgcac cgagggcgtc
     4561 accggccgct gatgggcgtg catcaccagc atgtcgtggc gcgtctcggc ttcgaacacg
     4621 cgtttgcccg tgatgagcca gtagccgacg caaccgaccg cgtacagatc ggcgcgccga
     4681 tcgaccggcg cttggaaccg caccatctcg ggcgccatga tcgcgggcgt gccgacgaag
     4741 cggcgctcgt cctcgagctc ctcggccgtg gggtgacgat cgagcacgag gccgaagtcg
     4801 agcactttga cgaagtcgac gtcgccgccg agctcgcagg tgaaaatgtt ggcgggcttc
     4861 acgtcgcggt ggacgaagtt gcgatcgtgc gcctcggcga gcgagtggca gacctgagtc
     4921 aagagatacg ccgcgcgttc gggcgtctgc ggcccgaagc gatcgatgag cgtcttcagg
     4981 tcgaggccgt gcagaagctc cataacgtag taaaaggcgc cctcgcgcgt ggtgccgaaa
     5041 tcgtagagtg cgatggtgtg gggtgagtcg agcgaggccg tcgtgcgcgc ttcgcgcaag
     5101 aacaagcgta agaggcgctc ggcctcgagc gggccgtggt cgaccaggat cttgggacgg
     5161 atgagcttga cggccgcggg ccgagcgagc aggcgatgct cggcgcgcca cacttcggcc
     5221 atgccgccga cgccgagccg ctcgacgagc cggtagctgc cgacttcgcg cgccttgacg
     5281 atcccctcgc tcaagcggtg cacgacgcgt gaaatcgcgt acgcgacgaa cgcagcgacg
     5341 aacggcgacg aaaacaggag caagaggtcg ccgggcggcg gcgtcggatc gcccgagcgc
     5401 gcgatcacga acgcgagcgg atccatgcag gccgccccga acagcgtgcc gacggccgtg
     5461 cggggtgacg ccgggatcaa cgcgccgaac gcgatgatcg gcacgaccac gggcgagact
     5521 tggcggacga gctcggctgc cggccagcct ccggcgtgcc gcaggagtcc gagtagcaac
     5581 gagaggacga tcaggtacgc gtagccgaga tcgtgcgcgt gctgcggcct gagcttcgcg
     5641 atgcgcgtca tgccgtgggc cgcgaggctc aacccggtgc cgacgccgag cagcgtgaga
     5701 cagccgccac gcatgcgcag ccactcgggc gtcgaaggca cgaacagcgc gagggccgcg
     5761 aggtaaacag cgagcaccgc cgcggcgacg agcgtcaacc cgcgcagccg gccgacgcct
     5821 tccctcaaga gatctgccgg aagttcccgg ctggcggctg cgcgcaccgc ctccatctcg
     5881 ttccagccga cgctgacgtc ggggtcgtcg ctgcgcagcg gctccaggtg cgtcggcccg
     5941 gcagcctggg ccccagcgtg aggctgctca gatttttcag cgccgggcgg cacggcgcaa
     6001 gtataggcgc tcgtttgatt ttcgtccgcg tatcgcccgc ggatgtttct cgaaagaact
     6061 acgaatcatc tgagaaacaa tcgatatgga taacctcatg ccgtcgcaaa cgaacggaaa
     6121 cgttggttcg atgtgcatcg gcctcgggtc cggacgtgag ctccatcaat cattcccacg
     6181 gaggtttgag ctcatgaaaa gactgatctt tttgctaatc acatcgatcc tggcaagcct
     6241 catgctcgcc ctgcctgcgc cgaacgcgcg cgccgacgag ccgaccccca ccgctgctgc
     6301 ggccccggct gctgctgcgc ccgctgcggt cccgagcgac gtggaaaagc gcctcgcgga
     6361 cctcgaggcg tacgtcacga acggcgctcg cgccgacgac aagacctcga aaatcacctc
     6421 gcctgggccc ggtcacaacg gcttcatgat gatctgtgcc gcgctcgtgc tcttcatgac
     6481 gctgccgggt ctcgcgctct tttacggcgg cctcgtgcgg caaaagaacg tgctctcgat
     6541 catggcgcag tgcatgggca ttgccgcgct cgtgacgctg ctttggtggg ccttcggcta
     6601 cagcctcgcg tttgcgcccg gtacgccgtt catcggcggc atggcgaacg cgatgctcaa
     6661 ggacgtcggc atggccccga acaccgcgta cgccggctgg gtctcgcaga gcaccttctc
     6721 gatgtatcag ctcatgttcg cgatcatcac gccggcgctc atcatcggct cgatcgccga
     6781 acgcgtgaag ttcagcgcgc tcttgatctt cgtcaccgct tggatggtcc tcatctattt
     6841 cccgctcgcg cacatggtct ggggcgccga cggcttcatg aacggcgtct ggaacaagga
     6901 cgctggcatc aaagccatcg atttcgcggg cggcacggtg gtgcacatgt cctccggctg
     6961 gtcggcgctc gtgctcgcgc tcatcgtcgg caagcgcgtc ggcttcggta aagaagagtt
     7021 cattccgcac agcctggtgc tcacgatggt cggcacgggc atgctgtggg tcggctggta
     7081 cggcttcaac gcgggcagcg ccgtcgcggc ggacggcatc gcggcgcaag cgttcatgac
     7141 cacgaccctc gccgcggccg tagccggtgg cgcctgggcg ggcgtcgaat ggctcacgcg
     7201 cggcaagccg agcgtgctcg gtttctgctc gggcatcgtc ggcggcctcg tcgtgatcac
     7261 gcccgcggcg ggcttcgtct ccgccaacgg cgccatgctc atcggcatcc tcgccggtgt
     7321 cgtgccctac ttcgcctgca ccaagctcaa gcacgcgctc ggctacgacg acgcgctcga
     7381 caccttcggc gtgcacgcgg tcggcggcac gctcggcgct ttcctcacgg gcttactcgc
     7441 aacgcccgac gcgaacccga acctgctcac caacctgaaa gacatcgtcg gtaagacgct
     7501 ctgggtcgag cagctcaagg cgatgggcct cactttggcg ctctcgatca tcggcacggc
     7561 cgtgctcggc tatgcgctca agctgacgat cgggctacgc ccgtcggcgg aagaagaaga
     7621 gagcgggctc gacgtgagcg gtcacggcga gaagggctac aacgtttcgt agagccgctt
     7681 agctacgcat cgaaagcgaa ggcccgggtc actccgggcc ttcgtcgttt gtacgctggc
     7741 tcggcgaacc cgaatggtgc gccggctcgg cgaacccgaa gctcacgcgg cgcgggggtc
     7801 gttgacgatg cgcagcggtc ggcggtcacc gatcgaagag atcggcctcg cgccgagttc
     7861 ctcgtcgaga atgtcgctca ccatgggctc acagccaccg cagcagccgg acgcgcccgt
     7921 gacggcgcac acggcctcga tcgtggtcgc accgtcgcgg atgctggcgc ggatggctcg
     7981 gtcactgacg gctcgacaat ggcaaacaat cacgaccctc caaacttaat gcagttgaaa
     8041 acgactttca acatcacttg caacaagaac gcgatccgcc acgcaatttg ggcgaaagtc
     8101 ggccgagcga ccggcttctt gtcggctttg ggcgcgaacc gtcggagcag ctcaggggag
     8161 aaccggcgtc cggaatggtc ggcagcgagc agggcttggg ctcgcgccgg ccggccccgt
     8221 atagtccccg ccatgcaagg cgacgccgag atcatcgagc tcttgaacga ggttttgacc
     8281 tcggagctca ccgccatcaa tcagtacttc attcatgcga agatgctgaa aaaccagggc
     8341 tacgaccggc tcgccaaaaa aaagcgcgag gaatcgatcg aggagatgca tcacgccgac
     8401 gcgatcatcg agcgcatcct ctttctcgac ggcgtgccca acatgcagcg cctctttccc
     8461 gtgcgcgtcg gcgaagagcc ggtcgagatg caccgcgtcg atctcgccgt ggaaaaagag
     8521 gctcacgcgc gcttgaaccg cggcatcgcg cttgcggtcg ctaagggcga taacgggacg
     8581 cgcgcgctgc tcgagtcgat tttgaagtcc gaagaggagt cgatcgattg gctcgagacg
     8641 catctcggcc tcatccagga gctcgggcgc gagcgctatt tggccgaaca gatgcacgaa
     8701 tagaccttgg tcggcctttc cgtttggctc gctcggtggt aggcaaagcg ccccagcatg
     8761 agcggccatt ccaaatgggc gacgatcaag cgtaagaagg gcgcgaccga ccaagcgcgc
     8821 ggtcgcatct ggaccaagct cattcgcgag gtggtgaccg ccgcgcggat cgggggcggc
     8881 gatcaggacg gcaatccacg cctgctt
//
LOCUS       DATIML010000826         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_754217, whole genome shotgun sequence.
ACCESSION   DATIML010000826 DATIML010000000
VERSION     DATIML010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_754217"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..952
                     /locus_tag="VLJ38_14280"
     CDS             <1..952
                     /locus_tag="VLJ38_14280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40742.1"
                     /translation="RGGMGGSPAPYIDPASGLFFTGVGSAPADKTCDSLATERFCDQT
                     IYNLAPARRTLYSWTTAEQVAELRADPVLLTRTETAGLGRGYAFTAIDALAARGSAPE
                     NQLLQKISGELFVKVRYAWPNAWATRMGWPGEDYGDQLLRIVLKPEAWIVIVSDGVGI
                     AVIDMNNQLVPIADALAHSERIGAVYFYKRDVTGSGSFQSCSGGYREFIVGNEAMIEE
                     WSLGTADIRERILDDAVLIEGFLGDLRAMPSGVDPATFNQAVVCNWDSAPSDELGRYE
                     RSLSIPSEYYAPLPEALANLSQTLRASLFDPEPLIVRPGD"
     gene            1147..>2046
                     /locus_tag="VLJ38_14285"
     CDS             1147..>2046
                     /locus_tag="VLJ38_14285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40743.1"
                     /translation="MMIAETPSIPAPSSQTTPTAPPPPPLPSLFADPVRTAAAAPIAG
                     GTLLVTADGKTAVAADPDRNRVFLVDLATHAVRSVATEPGEALGRVAEGPNGTVFVAA
                     RRGGAVLAIDVTLGTVQRRTPVCNAPSGLTYDAAQNRLYVACRSGRLVTLDGTSGSVV
                     STLDLDPDLRDVFLVNDSLVVTRFRSAELLRLDANGAVSAHQSPPSMGTGLASVAFRG
                     VPLPNGMLMLAHQIESSSPLGTGFGAYYGGSCAGGGVVGQALSLVAFGDTVLPPAQTS
                     GAVVSQPNGAFSMASRFVVGALGP"
BASE COUNT          301 a          751 c          662 g          332 t
ORIGIN      
        1 ccgcggcggc atgggcggga gcccggctcc ctacatcgat ccggcgagtg gactcttctt
       61 tacgggcgtc ggttcggccc ccgccgacaa gacctgcgac tcgctcgcga ccgagcggtt
      121 ctgcgatcag accatctaca acctcgcgcc ggcgcgtcgc acgctctact cgtggacgac
      181 agccgagcaa gtcgccgagc tccgcgccga cccggtcctg ctcacgcgca ccgaaacggc
      241 cggactcggc cgcggctacg ccttcaccgc gatcgatgcg ctcgcggcgc gcggttccgc
      301 gcccgaaaac cagctgctcc aaaagatcag tggcgagctc ttcgtgaagg tccgctacgc
      361 gtggccgaac gcgtgggcga cgcgcatggg ctggccgggc gaagactacg gcgatcagct
      421 gctccgcatc gtgctcaaac ccgaagcgtg gatcgtgatc gtgagcgacg gtgtcggcat
      481 cgccgtcatc gacatgaaca accagctcgt ccccatcgcg gacgcgctcg cgcacagtga
      541 acgcatcggc gccgtctact tttacaagcg ggacgtgacg ggctcgggca gctttcagag
      601 ctgcagcgga ggttatcgcg aattcatcgt cggtaacgaa gccatgattg aagagtggtc
      661 gctcggtacc gccgacattc gcgagcgcat cctcgacgac gccgtgctca tcgaaggctt
      721 tctgggcgat ctgcgagcga tgccgagcgg cgtcgatccg gcgaccttca atcaagctgt
      781 cgtttgcaat tgggactccg caccctccga tgagctcggc cggtacgagc gctcgctgtc
      841 gattccgagc gagtactacg cgccgctgcc cgaggcgctc gcgaacctga gtcaaacgtt
      901 gcgtgcgagc cttttcgacc ccgagccttt gatcgtgcgt cccggcgatt agccatgcgg
      961 atgggccatt atttcggttc ggcactcgcg ctgtccttac tggtgacggc gtgcgacgat
     1021 gggtctccca gtctcgatct ggggctgccc gcggatgctc atagcccgcc ggagcaaccc
     1081 acgccgagcg cgaccgcaac gcagccgtcg ccccctagcg ttgcgcctac tccgacgccc
     1141 ggccccgtga tgatcgctga aacaccgtcg atacccgcgc cgtcgtcgca aaccacgccg
     1201 acggcgcccc cgcccccgcc cctgccgagc ctcttcgccg atccggtccg tacggccgcg
     1261 gccgcaccga tcgcgggcgg cacgctgctc gtcaccgccg acggcaaaac cgccgttgcc
     1321 gccgaccccg atcgcaaccg cgtcttcctg gtcgacctcg cgacgcacgc cgtgcgctcc
     1381 gtggccaccg agccgggcga agcgctcggt cgcgtcgccg aagggccgaa cggcaccgtt
     1441 ttcgtcgccg cacgccgcgg cggcgccgtg ctcgcgatcg acgtgacgct cggcaccgtc
     1501 cagcgccgca cgcccgtgtg caacgcgccg agcggcctca cgtacgacgc cgcccaaaac
     1561 cgcctctacg tcgcctgccg ttcgggccgc ctcgtgacgc tcgacggcac gagcggcagc
     1621 gtggtctcga cgctcgacct ggatccggac ctgcgcgacg tgttcctcgt gaacgactcg
     1681 ctcgtcgtga ctcggttccg cagcgccgag ctgctcaggc tcgacgcgaa cggcgccgtg
     1741 agcgcgcacc agtcgccgcc cagcatgggc acgggtctcg cgagcgtcgc gtttcgcggc
     1801 gtgccgctgc cgaacggcat gctcatgctc gcgcatcaaa tcgagtcgag ctcgccgctt
     1861 ggcaccggct ttggcgcgta ttacggcggc agctgcgcgg ggggcggcgt cgtcgggcag
     1921 gcgctcagtc tcgtcgcttt cggggacacc gtgctgccgc ccgcgcagac gagcggggcc
     1981 gtcgtgagcc agccgaacgg cgcgttttcg atggcgtcgc gcttcgtcgt cggcgcgctc
     2041 ggcccg
//
LOCUS       DATIML010000827         2934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_174342, whole genome shotgun sequence.
ACCESSION   DATIML010000827 DATIML010000000
VERSION     DATIML010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174342"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            284..1810
                     /gene="mmsA"
                     /locus_tag="VLJ38_14290"
     CDS             284..1810
                     /gene="mmsA"
                     /locus_tag="VLJ38_14290"
                     /EC_number="1.2.1.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR01722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004491 - methylmalonate-semialdehyde
                     dehydrogenase (acylating, NAD) activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HSU40744.1"
                     /translation="MPFDLASATKSEDNSGLVDVADRLVRSGSNLLGGAWAPARSGSE
                     VVVTSPYTGAVIGSVPDSGADDVEDIVRAAAAAWPGWAGTPLKERVRPLQRFAAIVSR
                     NADELAQTVALESGKTRNEALGGIQRGLEVVEFAVSLPNLDHGGALEVSRGVTCEYRR
                     EPLGVVAGVTPFNFPAMVPMWMFPIALAVGNAFILKPSEKVPLSACLLGQWLLDAGLA
                     PGLFSVVHGRRATVEALIDHPGVSAVGFVGSTPVARALHGRATALGKRALCLGGAKNH
                     LLVAPDADEALTVKSVVDSFTGCAGQRCMAASVLVVVGAAERLLDPIVRTASKLELGT
                     GMGALIDQPARERLVSAITRAEADGATLLLDGRSAAAPAGYEGGNWLGPTVIDRVTPD
                     MSCANVELFGPVLSVIHVDTLDQALALERQSEYGNALSIFTSSGAVARYVAERATSGM
                     VGVNVGVPVPRDPFSFGGTKSSKFGQGDMTGPAGVELWSNLKKITTKWALSTDSNWMS
                     "
     gene            1827..>2934
                     /locus_tag="VLJ38_14295"
     CDS             1827..>2934
                     /locus_tag="VLJ38_14295"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF005536.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HSU40745.1"
                     /translation="MTTTGPKKKQPKAIVLTSHPRTHGPQPVPIVWGARDPMLRGPLV
                     GTVTNHAQRNVIGTHAGSYSVYRAVAVAAGALDPLRRPDLTNTDPTNRIGPFEQWFDP
                     AKIVALDPFGAVVSSAFASYFEQGYDIRPTIAITRAQIKMHELAEAVTAGRLEVDGKI
                     LRPGGAVYVTKAAIEPVWYLPGVAARFGCSEADLRRTLFEHTAGMFPELVTRNDLEVL
                     LPPIGGATVYMFGDIEAIADPSRALAVRVHDECNGSDVFGSDICTCRPYLTHGIEECV
                     RTAQAGGSGVIVYNRKEGRALGEVTKFLVYNARKRQEGGDRAEHYFARTECVAGVQDM
                     RFQELMPDVLHWLGITKIDRFVSMSNMKHDAVTRS"
BASE COUNT          481 a         1004 c          981 g          468 t
ORIGIN      
        1 tacaacgagg acggcttcgt cttcttcgtg agcattggtc tacgcggcga atcccaaggg
       61 ccggccgacg cttcggttcg catcaccagc gtcgaagtcg aagctggcgg cggcgcggtg
      121 atgtcggatt cgttcgattg cgggcactga agagagtgag cgtgcccgag cgagcggctt
      181 cgctgtgcga gtccacctca ggcggtagca cccgtcggcg gaccgtccgt tcccggcgga
      241 tcgagccgga tcgctgcttt tttgcgcccg gcccccgggc cccgtgccgt tcgatttggc
      301 atcagcgacc aagagcgagg acaatagcgg tctggttgac gtagccgatc gcttggtccg
      361 ttccggaagc aacctgctcg ggggcgcatg ggcacccgcg cggtcgggca gcgaagtcgt
      421 ggtcacgagt ccttacacgg gcgcggtgat cggaagcgtg cccgattcgg gagccgatga
      481 cgtcgaggac atcgtgcgcg ccgcggccgc tgcgtggccg ggctgggcgg ggacgcccct
      541 caaggaacgg gtgcgcccgc tgcagcgctt cgcagcgatc gtgtcgcgca acgccgacga
      601 gctcgcgcaa acggtcgccc tcgaatcggg aaaaacccgg aacgaagcgc tcggcggcat
      661 tcagcgcggg ctcgaggtgg tcgaattcgc ggtgagtctc ccgaacctcg atcacggcgg
      721 cgcgctcgag gtgtcgcgcg gcgtgacgtg cgaataccgg cgcgagccgc tcggcgtggt
      781 cgcgggcgtc accccgttca actttcccgc catggtgccg atgtggatgt tcccgatcgc
      841 gctcgccgtc ggtaacgctt tcatcttgaa accatcggaa aaagtgccgc tgagcgcctg
      901 cttgctcggc cagtggctgc tcgatgcggg cctcgcaccg ggcctctttt cagtggtgca
      961 cggccgccgc gccacggtcg aggccttgat cgatcacccg ggcgtcagcg ccgtcggctt
     1021 cgtgggctcg acgccggtcg cgcgtgccct gcacgggcgg gcgaccgcgc tcggtaaacg
     1081 cgcgctctgc ctgggcggcg ccaagaatca cctcttggtg gcgccggatg cggacgaggc
     1141 actgaccgtt aaaagcgtcg tggattcgtt caccggctgc gccggacagc gatgtatggc
     1201 ggcgagcgtg ctcgtggtcg tgggcgcagc ggagcgcttg ctcgatccca tcgtccgcac
     1261 ggcgagcaag ctcgagctcg gcacgggcat gggcgcgctc atcgaccagc ccgcccgcga
     1321 acggctcgtg tccgcaatca cgagagccga ggccgacggc gcgacgctct tgctcgacgg
     1381 gcggagcgct gcggcgcccg cgggctacga aggcggaaac tggctcggcc ctaccgtcat
     1441 cgatcgcgtg acgccggaca tgagctgcgc gaacgtggag ctattcgggc cggttttgtc
     1501 ggtgatccat gtggacaccc tcgatcaggc cctcgccctc gagcgacaga gcgagtacgg
     1561 caacgccctc agcatcttca cgagcagcgg cgccgtcgcc cgctacgtcg ccgaacgcgc
     1621 gacgagcggc atggtgggcg tcaacgtcgg agtccccgtc ccccgcgatc cgttctcgtt
     1681 cgggggcacg aagagctcca agttcgggca gggagacatg acggggcccg ccggcgtcga
     1741 gctctggagc aacctgaaga agatcacgac caaatgggcg ctctccaccg actccaactg
     1801 gatgtcttga ccgaggcgga cggcacgtga ccacgacggg acccaagaag aagcaaccca
     1861 aagcgatcgt gctcacgtcg cacccgcgca cgcacgggcc gcagcccgtc cccatcgtct
     1921 ggggcgctcg cgatcccatg ctgcgcggcc cactggtcgg caccgtgacc aaccatgcgc
     1981 aacgcaacgt catcggcacg cacgccggct cctattccgt ctaccgtgcc gtcgccgtag
     2041 ccgccggcgc gctcgatccg ctgcgcaggc cggatctcac caacacggat ccgaccaatc
     2101 gcatcggccc cttcgaacag tggttcgatc cggcgaagat cgtcgcgctc gacccgttcg
     2161 gcgccgtggt cagcagcgcc ttcgcctcct atttcgagca aggctacgac atccgcccga
     2221 cgatcgcgat cacgcgcgcg cagatcaaaa tgcacgagct cgcggaagcg gtcacagccg
     2281 gtcgcctcga ggtcgacggc aaaatcctgc gcccgggcgg cgccgtttac gtcaccaagg
     2341 ccgcgatcga gccggtctgg tacctgcccg gcgtggcggc gcgcttcggc tgctccgagg
     2401 cggacctgcg tcgcacgctg ttcgagcaca cggcgggcat gttccccgag ctcgtcaccc
     2461 gcaatgatct cgaagtgctc ttgcctccga tcggcggcgc gacggtctac atgttcgggg
     2521 acatcgaggc gatcgctgat ccgtcgcgcg cgctcgcggt gcgagtgcac gacgaatgca
     2581 acggctcgga cgtgttcggg tcggacatct gcacctgccg cccctacctc acgcacggca
     2641 tcgaggagtg cgtgcgcacg gcgcaagcgg gcggctccgg cgtcatcgtc tacaaccgca
     2701 aggaaggccg cgcgctcggc gaggtcacca agttcctcgt gtacaacgcg cgcaaacgcc
     2761 aggaaggcgg cgaccgcgcc gagcactact tcgcccgcac cgaatgcgtc gccggcgtgc
     2821 aagacatgcg ctttcaagag ctcatgcccg acgtcttgca ctggctcggc atcacgaaaa
     2881 tcgaccgctt cgtgtccatg agcaacatga aacacgatgc cgtcacgcgc tccg
//
LOCUS       DATIML010000828         2329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_463799, whole genome shotgun sequence.
ACCESSION   DATIML010000828 DATIML010000000
VERSION     DATIML010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463799"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1469)
                     /locus_tag="VLJ38_14300"
     CDS             complement(<1..1469)
                     /locus_tag="VLJ38_14300"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU40746.1"
                     /translation="MASSGGDLPTFDALELSPEVRRAVDELGYVHPTPVQLAVFEPAV
                     RGKDLVVQARTGTGKTAAFGLPLVDGIIKRASNVVQALVLCPTRELALQVTREVDALA
                     KHRGVRTAAVYGGAPMARQVADIKGGAQIVVGTPGRVLDHLHRETLDPSSIRTFVLDE
                     SDEMLSMGFLPQISDILGFLPAARQTLLFSATLPPDIRRVAETRLREPQFLTLSGDHI
                     GALEINHFVYIVPGDKLQALIQIIEVENPESAIVFCNTKDETKRVAAALEQQGFAADW
                     LNADLPQSDREKVMAATRNGTLRFLVATDVASRGIDISQLTHVINHDFPESAEAYVHR
                     TGRTGRAGRTGTAVSIVGPRDVGNLYLLRLTYKLRPIERQLPTARDKKTREETDLLRM
                     FTDAFSARRTHPDDLALARRLLSHDEAETIIAGLLRDHLGARPDAVDEATAARRTRTA
                     KGGAPEESPQTNGSPAEPQRAQSRGRDEQSRGRDEQSRGR"
     gene            complement(1476..1928)
                     /locus_tag="VLJ38_14305"
     CDS             complement(1476..1928)
                     /locus_tag="VLJ38_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40747.1"
                     /translation="MVRPARSRGRRIGRRIGIAVFAACVGVPTLLWTYQIMLAIFFRA
                     PGPAPASCEGGLLELLRAVDRARQAARQEPGGERQSLARFRTALDPEWQTRPALDALC
                     RGVPAEARRLREVDALRYAEEHAVRYEATALARQRQRARELEHELETR"
     gene            2052..>2329
                     /locus_tag="VLJ38_14310"
     CDS             2052..>2329
                     /locus_tag="VLJ38_14310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40748.1"
                     /translation="MKAQKVAEVPGLGIEAAVDALRGAVRTEAPGMRAEARLAEVAAI
                     FADDLAWVEAELGRAGQTGPAPGADAARHLIARGGKRLRPLALLLSSA"
BASE COUNT          353 a          767 c          817 g          392 t
ORIGIN      
        1 cgcccgcggc tctgctcgtc acgcccgcgg ctctgctcgt cacgcccgcg gctctgtgct
       61 cgctggggct cggcgggtga gccgttggtc tgcggcgatt cctccggcgc gccgcctttc
      121 gcggtgcgcg tgcggcgtgc ggcggtggcc tcgtcgactg cgtcgggtcg tgcacccaag
      181 tggtcgcgca agagccctgc gatgatggtc tcggcttcgt cgtggctcaa gaggcgccgg
      241 gcgagcgcga gatcgtccgg gtgcgttcga cgcgccgaga aggcgtcggt gaacatgcgc
      301 aagaggtccg tctcctcacg cgttttcttg tcgcgtgcgg tcggcagctg acgctcgatc
      361 ggtcggagct tgtacgtgag acggagcaaa tacagattgc cgacgtcgcg tggtccgacg
      421 atggaaacgg ccgtccccgt gcgcccggcg cgccccgtgc gccccgtgcg gtgcacgtag
      481 gcttcggccg actccgggaa atcgtgattg atgacgtgcg tgagctgcga aatgtcgatg
      541 ccgcgcgacg ccacgtcggt cgcgaccaga aaacgcaagg tgccgttgcg cgttgccgcc
      601 atcaccttct cgcgatcgga ctgcggcaag tcggcgttca accagtcggc ggcgaagcct
      661 tgctgctcga gcgccgcggc gacgcgcttg gtctcgtctt tggtgttgca aaagacgatc
      721 gcgctttccg gattttcgac ctcgatgatt tgaatcagcg cctggagctt gtcgccgggc
      781 acgatgtaaa cgaagtgatt gatctcgagc gcaccgatgt gatcgccgct cagcgtgaga
      841 aactgcggct cacgcaggcg ggtttccgcg acgcgccgga tatcgggcgg cagcgtcgcg
      901 ctgaagagca gggtttggcg cgccgccggc aagaagccga gaatgtcgga tatctgcggc
      961 aaaaagccca tcgagagcat ctcgtcgctc tcgtcgagca cgaacgtccg gatcgaagag
     1021 ggatcgagcg tctcgcggtg caggtgatcg agcacgcggc cgggcgtacc cacgacgatc
     1081 tgggcgccgc ccttgatgtc ggcgacctgt cgcgccatcg gagcgccgcc gtacacggcc
     1141 gccgtccgga cgccgcggtg cttggctaac gcgtcgactt cgcgcgtgac ctggagcgcg
     1201 agctcgcgcg tcgggcagag cacgagcgcc tgcacgacgt tcgaggcgcg cttgatgatg
     1261 ccgtcgacca gcggcaggcc gaacgctgcc gtcttgcccg tacccgtgcg cgcttggacg
     1321 acgaggtcct tgcctcgcac ggcgggctcg aacactgcca gctgcactgg agtcgggtgg
     1381 acgtagccga gctcgtccac ggcgcgccgc acctcgggcg agagctcgag cgcatcgaaa
     1441 gtcggaagat caccgccgga agaggccatt ttaattcacc gcgtctcgag ctcgtgttcg
     1501 agctcgcgcg ctcgctgccg ttggcgggcg agagcggttg cctcataccg cacggcgtgc
     1561 tcttccgcat agcgcagggc gtcgacttcg cgtagtcgcc tggcttcggc cggcacgcct
     1621 cggcaaaggg cgtccagcgc cgggcgagtt tgccactccg ggtcgagggc cgttcgaaag
     1681 cgcgcgaggc tctggcgctc gcccccgggc tcctgccgtg ccgcctgacg cgcacggtca
     1741 acggcgcgta aaagctcgag caaaccgccc tcgcagctgg cgggcgcagg ccccggcgct
     1801 cgaaaaaaga tcgccagcat gatctgatag gtccagagca gtgtcggcac cccgacgcaa
     1861 gccgcgaaga cggcgatgcc gatccgccgg ccgatgcgtc ttcctcgcga gcgagcgggg
     1921 cgtaccacgt gtcgtctttc agcacggtac cgggcctgcg gtcaaacccg gccaggtggc
     1981 cagtgcacgg aatcgggatg tccgggcgtt gaccccttgc gcccacgccg ccataattct
     2041 ttcacaagaa tttgaaagct cagaaagtcg cagaagttcc cggactcggc atcgaggcag
     2101 ccgtcgatgc gctgcgcggt gccgtgcgca ccgaggcgcc cggcatgcgc gcagaagcgc
     2161 gcctggcgga ggtcgccgcc atcttcgccg atgatctcgc gtgggtcgag gcggagctcg
     2221 ggcgcgccgg ccaaacgggg cccgcgccgg gagctgatgc ggcgaggcac ctcatcgcgc
     2281 gcggtggcaa gcgcctgcgt ccgctcgcgt tgcttttgag ctcggcctg
//
LOCUS       DATIML010000829         2282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5377835, whole genome shotgun sequence.
ACCESSION   DATIML010000829 DATIML010000000
VERSION     DATIML010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5377835"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VLJ38_14315"
     CDS             complement(<1..363)
                     /locus_tag="VLJ38_14315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40749.1"
                     /translation="MPLGCGPATPAATTPSPDQTVCTGTIGLALDTQGIAAGKQRLRL
                     AVFRAQGQKFWQPADLGVTVRVRLFRLLPEANITSGPGQEVRLMLPEVIAAPSNGGAP
                     VGALMPAVHYNYGVEADLD"
     gene            complement(427..1458)
                     /locus_tag="VLJ38_14320"
     CDS             complement(427..1458)
                     /locus_tag="VLJ38_14320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HSU40750.1"
                     /translation="MSISYVIAGILGLALLMVVHEMGHLLAARAFGMRVLRFSIGFGP
                     PLWRHKARGSETIYQVALIPFLAYVQIAGMNPFEEIDPEDKASYANGSLVARISAIVA
                     GPLANYLFASVFFFTALMIGGKPVYTTAVQVLDGPAKAAKMQDGDLVETIDGQRVSDW
                     EDLRRRVMASGNRPLEVGAKRKGVPMTFHVKPVTMEGQSKIGVASLPRQVPVTFREAT
                     TQSLILPANVVKGLVIGLSRVLTGREKPQLSGPVGIVKQTSLVAQRSWTEYLTWLGIL
                     SAYLGGFNLLPFPALDGGRLAFLGYEAVTRRRPNARVEARVHFFGLVMLLALIAVVSV
                     FDVVDIRAN"
     gene            1611..>2282
                     /locus_tag="VLJ38_14325"
     CDS             1611..>2282
                     /locus_tag="VLJ38_14325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40751.1"
                     /translation="MSQDNVPKAPVTAPNLQLSGGAAIVAPVSAFPGGVPGNALIVLP
                     LSKPDDEFMKKVSAGPIALQIEEMWKQLGFNGPAVQVQDAEGRPIAIGLDDLVAGLEK
                     HWGEDQSDLNRGRLLAQELMKYGRFEKAEKTLAKVVALGGTGDDWLGLGIAQVQQEKW
                     DKAEATLKGAQNLLPGNPLPFLHLSRVYEGLGDATNERAMIEHAIAAAPGAVDGWAAL
                     YSHVRR"
BASE COUNT          405 a          749 c          782 g          346 t
ORIGIN      
        1 atccaaatcg gcttcgacgc cgtagttgta gtgcaccgcc ggcatgagcg cgcccactgg
       61 agcgccgccg ttcgatggcg cggcaatcac ctccggcagc atcaagcgca cttcttggcc
      121 ggggcctgag gtgatgttgg cctcgggcag cagccggaaa agccgcacgc ggacagtgac
      181 gccgaggtct gcaggctgcc aaaacttttg gccctgagcg cgaaataccg cgagcctcaa
      241 gcgctgtttg cctgcagcga taccctgggt atcgagcgcc aagccgatcg tccccgtgca
      301 gacggtttgg tccggcgagg gcgtcgtggc ggcaggggtt gcaggtccgc aaccgagcgg
      361 caccagcccg agcttcagtt cagcggagtc gctcggtggc cttcgccgga atggactcgg
      421 tcgcgcctaa ttcgcgcgaa tatcgacgac gtcgaagacg ctcacgaccg cgatcagcgc
      481 gagcagcatg acgaggccga agaagtgaac gcgcgcttcg acgcgggcgt tcgggcgccg
      541 gcgcgtgacg gcttcgtagc cgaggaaggc gagccggccg ccgtcgagcg cgggaaacgg
      601 cagcaaattg aagccgccga ggtacgcgct caggatgccg agccaggtca aatattcggt
      661 ccagctccgc tgcgccacga gcgacgtctg cttcacgatg ccgaccgggc ccgagagctg
      721 cggcttttcg cgccccgtga gcacgcgcga gagcccgatc acgaggcctt tgacgacgtt
      781 ggccggcaaa atcaaggact gcgtcgtcgc ttcccggaac gtgacgggca cctgtcgcgg
      841 gagcgaggcc acgccgatct tgctctgtcc ctccatcgtg acgggcttca cgtgaaaggt
      901 catcggcacg cctttgcgct tggcgccgac ttcgagcggg cggttgccgc tcgccatcac
      961 gcggcggcgt agatcctccc agtcactgac gcgctgaccg tcgatcgtct cgacgaggtc
     1021 gccgtcctgc atcttcgcgg ctttggccgg cccatcgagc acctgcacgg cggtcgtgta
     1081 gacgggcttg ccgccgatca tgagcgccgt gaaaaagaac acggaggcga agaggtagtt
     1141 cgccagcgga cccgcgacga tcgcggagat gcgcgcgacg agcgagccgt tcgcgtagct
     1201 cgctttgtct tcgggatcga tctcctcgaa cgggttcatc cccgcgattt gcacgtaggc
     1261 gaggaagggg atgagcgcga cttgataaat ggtctcgctg ccgcgcgcct tgtgacgcca
     1321 gagcggcggg ccgaacccga tactgaagcg caggacgcgc atgccgaacg cacgcgccgc
     1381 caggaggtgc cccatctcgt gcaccaccat gagcagtgcc aacccgagga tcccggcgat
     1441 gacgtagctg atgctcaccc gaaccaatat agcgtcgcgt gaggccggcc gccacgctcg
     1501 aggccggcgg tattgccggg gcgagagggc actgctagag ccggtgcctc gtcgggtacg
     1561 agggtgtgcc gcgcgcggcc gcgcggcccc gaccgccgag cgaaaccgag atgagccaag
     1621 acaacgtacc gaaggcgccc gtgactgccc cgaacctcca gctctcggga ggcgctgcca
     1681 tcgtcgcgcc cgtgagcgcc ttcccgggcg gcgtgcccgg caatgcgctc atcgtgctgc
     1741 cgctctcgaa gccggacgac gagttcatga aaaaggtgag cgccggcccg atcgctctcc
     1801 agatcgagga gatgtggaag cagctcggct tcaacggtcc cgccgtacag gtgcaggacg
     1861 ccgagggacg cccgatcgcc atcggcctcg acgatctcgt cgccggtctc gagaaacact
     1921 ggggcgagga ccagagcgac ttgaatcgcg gccgcctgct cgcgcaagag ctcatgaagt
     1981 acggccgctt cgagaaagcg gagaagacgc tcgccaaggt cgtcgcgctc ggcggcaccg
     2041 gcgacgattg gctcgggctc ggcatcgcgc aggtgcagca ggagaagtgg gacaaggccg
     2101 aggcgacgct caagggcgcg cagaatctct tgcccggcaa tcccctgccg ttcttgcacc
     2161 tctcccgcgt gtacgaaggt ttgggcgacg ccacgaacga gcgcgccatg atcgagcacg
     2221 ccatcgcggc ggcgcccggt gcggtcgacg gctgggcggc gctctactcg cacgtgcggc
     2281 gt
//
LOCUS       DATIML010000830         2137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1913082, whole genome shotgun sequence.
ACCESSION   DATIML010000830 DATIML010000000
VERSION     DATIML010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1913082"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..703)
                     /locus_tag="VLJ38_14330"
     CDS             complement(<1..703)
                     /locus_tag="VLJ38_14330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40752.1"
                     /translation="MTQRLARRLWAVLAATLVVCLALVSRVAARDTGKARELRETIDR
                     ATLEVAIGRGRLALDDAGLVHSLAASLRALAAYYGKLPVDRVRVAVTPTHGRQINGST
                     RCGVSGPVVHLSLGAGVDAKALQNDWVVTHELLHVTFTSLDDEADTFTWVGEGLASYV
                     EPLVRVRAGTLTEATLWTELLAGAPQGLPEAGDRGLNRTHTWGRTYWGGALFWFEVDL
                     LLRERTAGHASMRDVL"
     gene            complement(719..1474)
                     /locus_tag="VLJ38_14335"
     CDS             complement(719..1474)
                     /locus_tag="VLJ38_14335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40753.1"
                     /translation="MPPPVLGFNNNVRHRGRIFHIQTEDSGVRFARIVTHLFADGGRI
                     IKTARTDYAEHVEKADVSKVVRTLMKDQHRAMFTALRAGELDAQLERAVGPLSDVPPA
                     ISRPTAPVATPRSAAPKSVRPPRSVRESERPRESERPRRRQLSNPALRGFAPSVSPPS
                     AEGFDLDVATLEQLPSRARVATPRGARKSQPPRSRPPQGRPQTQAQRPAAQFAAAPEA
                     RARSIFGDEAISEQTLDEVILSYLAEDLDGTQK"
     gene            complement(1528..>2137)
                     /locus_tag="VLJ38_14340"
     CDS             complement(1528..>2137)
                     /locus_tag="VLJ38_14340"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HSU40754.1"
                     /translation="SAEQAIKLLEKGEVDVVISELELGEGTDGFKLLELARQAEWGRG
                     LPWVFVTGSAAGNDAKRAFDLGAADFVTKPVSSDLLVAKLRQVIEREATRAGAKRGVS
                     GSLTEMSLPDMVQVLWHGRKTGALKIRSQTGTGEIHFVNGNVYNALFGNQRGEEAFYA
                     MLSLSQGDFVLDPNFVAPQELFNKSPEALLLEGMRRLDEAQR"
BASE COUNT          324 a          725 c          732 g          356 t
ORIGIN      
        1 gcagcacgtc gcgcatactc gcgtgccccg ccgtccgctc gcgcagtagc agatcgacct
       61 cgaaccagaa gagcgcgccg ccccaatacg tgcggcccca ggtgtgcgtg cggttgaggc
      121 cgcgatcccc tgcttccggt aagccttgcg gcgcgcccgc gagtagctcc gtccagagcg
      181 ttgcttcggt gagcgtcccc gcgcggaccc ggacgagagg ctcgacgtag ctcgcgagcc
      241 cctccccgac ccacgtgaag gtgtcggctt cgtcgtcgag ggacgtgaac gtcacgtgca
      301 agagctcgtg cgtgacgacc caatcgttct gtaaggcttt ggcatcgacg cccgcgccca
      361 ggctcaaatg cacgaccggg ccgctcactc cacagcgcgt gctgccgttg atttggcggc
      421 cgtgcgtggg tgtcacggcg acgcgcacgc ggtcgaccgg gagtttgccg taataagcgg
      481 cgagcgcacg gagcgaagcg gcgagcgagt gcacgaggcc ggcgtcgtcg agcgcgagac
      541 ggccgcgccc gatcgcaacc tcgagcgtcg cccggtcgat cgtttcgcgg agctcgcgcg
      601 ccttgcctgt gtcgcgagcg gcgacacgcg agaccagcgc gaggcacacg acgagcgtcg
      661 ccgcgaggac ggcccagagt cgccgagcca ggcgctgagt cacccgcgta ggctgatgct
      721 acttttgcgt cccgtcgaga tcttcggcga ggtagctcag gatcacttcg tcgagcgtct
      781 gctcgctgat cgcttcgtcg ccgaagatcg agcgcgcgcg cgcctccgga gcggccgcga
      841 attgcgcggc gggccgctgc gcttgcgttt gcggacgacc ctgaggcgga cggctgcgcg
      901 gcggctggct cttgcgcgcg ccgcgcgggg tcgcgacccg cgcgcgcgac ggcagctgct
      961 cgagcgtcgc cacgtcgagg tcgaagccct cggcgctcgg cgggctcacg ctcggcgcga
     1021 agccgcgcag cgcagggttc gacagctggc ggcgccgcgg tcgctccgat tcacgcgggc
     1081 gttcactctc gcggacgctg cgcggcgggc gcacgctctt cggcgccgcg gaacgtggag
     1141 tggcgacggg cgccgtggga cgtgaaatcg ccggcggcac gtcggagagc ggcccgaccg
     1201 cgcgttcgag ttgcgcgtcg agctcgcccg cgcgcagggc cgtgaacatc gcgcggtgct
     1261 gatccttcat cagcgtgcgc acgaccttcg aaacgtcggc tttttcgacg tgttcggcgt
     1321 agtccgtgcg cgcggtcttg atgatgcgcc caccgtcggc gaaaaggtgg gtgacgatgc
     1381 gtgcgaaacg cacccccgaa tcctcggttt ggatgtgaaa aatccggccg cgatggcgga
     1441 cgttgttatt gaagccgagg actggcggag gcaccttgga caaaagggag aacctctcgc
     1501 ggccgcccgc gaagctacaa gataccgcta tctctgcgct tcgtccaggc gtcgcatgcc
     1561 ttcgagcagc agcgcctccg ggcttttgtt gaagagctcc tgcggcgcga cgaagttcgg
     1621 atcgagcacg aaatcgccct gactaaggct cagcatcgcg taaaacgcct cttccccgcg
     1681 ttggttgccg aaaagcgcgt tgtacacgtt gccgttcacg aagtggattt cgcccgtccc
     1741 ggtttgagag cggattttga gcgcaccggt ctttcggccg tgccagagca cctgcaccat
     1801 gtcgggcagg ctcatctcgg ttagcgagcc ggaaacgccg cgcttcgcac ccgcacgcgt
     1861 cgcttcgcgc tcgatcacct ggcggagttt cgcgacgagc agatccgagc tcacgggttt
     1921 ggtcacgaag tcggcggcgc cgagatcgaa cgcgcgcttg gcgtcgttgc ccgcggcgct
     1981 accggtcacg aacacccacg gcaggcccct gccccactcc gcctgacgcg cgagctcgag
     2041 tagcttgaac ccgtccgtcc cttccccgag ctcgagctcc gagatgacga cgtcgacctc
     2101 gcctttttcg agcagcttga tcgcttgctc ggccgag
//
LOCUS       DATIML010000831        13429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5664382, whole genome shotgun sequence.
ACCESSION   DATIML010000831 DATIML010000000
VERSION     DATIML010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 13429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13429
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5664382"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1301)
                     /locus_tag="VLJ38_14345"
     CDS             complement(<1..1301)
                     /locus_tag="VLJ38_14345"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSU40755.1"
                     /translation="MVGSRAMAGFAWRFAAKPSVLAVVAALVAAFAFLAPARAGVLDE
                     VRARGELTWGGDLQGGAPYVFEDPRSPGGIRGFEVDIARAVGRRLGVKARFVQNDWSS
                     LIPALERGDFDVLLNGLEATPERRARLLLTVPYFVYGETLAVRRGAPYRALDDLRGKR
                     VATLNQTVAQQILTQHPVEIALYEGQQEPYFDLVHGRVDAVLLDHVIADVYGCPLAEV
                     TCLPGDVARGVYVAAVRRDRAELLRALDAALAAMIADGELRRILEAYRLWDAREEELS
                     ARAGGGVAARDGAVRESPGVRPNDGAVHEPPSRRRFDLAEFLLFLHGALFTLLISLGA
                     FALALPLGLLLAVARGFGSRGVSFAAAAYVEVFRGTPVLLQLYVLYFGLAPLVRLGPF
                     EAAILGLGMNYAAYEAEVHRGALLALPAGQTEAARALGLSS"
     gene            1317..1958
                     /locus_tag="VLJ38_14350"
     CDS             1317..1958
                     /locus_tag="VLJ38_14350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40756.1"
                     /translation="MPRPAPFLLVLSLALAAAGCAQQPVRLTEGPREYVSSDYDGVLR
                     LWTRSAQLTTLDALDNVLTVTATYESWDFRWAYTVRYAEDYRLTVDQRHALLERSLAD
                     THEKHEFYVALQAEKYKWNDLNAEQPAWIVRLIDDTGTETAPVEIQTIRRPGAIELTY
                     FPYTSPWRSAFRISFPRVRADGRPTIPGAAHWFGLRFAGPQGNQEIVWMVDKG"
     gene            complement(2329..4377)
                     /locus_tag="VLJ38_14355"
     CDS             complement(2329..4377)
                     /locus_tag="VLJ38_14355"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSU40757.1"
                     /translation="MSAEPPALPRAQDDDDDDVAWALRTAGVQWERGGAADAVVWLKR
                     AAESAAEAGAFGRSAEIQRRANEIDRWLKPPSGFPLQADEDDGVDSLLAAEPPEVEVE
                     TGASSEPSPSLVDALEAEERDYGEPVAIEAAPVGDLGDLEDVEDIEAADLDELEDEPE
                     DARSLDGYREELLDETTHARSEVSRQLLTADTRPPAPTSSRRPGAERVLTQPPSSRSS
                     KSRETTRVSAPPPKPVTSSLRPSTARAVSSPARASLPRELRRSVNATPQVPPPPEYKL
                     PPPPIPRLPLPEPRPLPEVSEARSTFPSEPVTLPASQRPFPSHVATVERRGQSPRVET
                     APPAEETPYVEEVTRGRAESLPEVSVTELDLPEQEAPTSTYTLGGADEGTTASLSVSV
                     RAAMATSQPPSRGAVREPPVSSAAPAELEAAVNALSETAPPPPVLDVTLLAACRGLED
                     LPPETQAELAARARLEVLAPDQEVSGFGLALVTRGQVVVMPTIAEGACGYAARGEPVF
                     SQGTLAEGVPLRAVALAEGADVAVWRPEDFAHVLETCPWVADELRAVADRFQAFAGAA
                     MGPLGDRLDDNMRAMITERCELRVLLAGDVLIEAGKVPDGLYIVGGGKLELLVGGKVK
                     EELGPGDLPFASSVLTREKASGSVRAAETGALVLHANRGATHELVVSVPPLLELLSMV
                     "
     gene            complement(4482..7232)
                     /locus_tag="VLJ38_14360"
     CDS             complement(4482..7232)
                     /locus_tag="VLJ38_14360"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HSU40758.1"
                     /translation="MGARLFMPRPATAGPAAPSPVLHRPSGRLREAAALLLVAGALFL
                     VLALVSCTVTPGSTEEISSWVGPTGGYVAHFLAQGFGVAAWLAPLELSLIAIPLFRGH
                     PMGDLWLRIAGDLTLAVVAAALAQVAAAGAVVFGHAPVGGNVGLLFGELMRELFSSVG
                     SFLVGSTIVGLILIGRASFSFIEACRRTLALLERLAARLNALGVRLRGAWREARQLRR
                     AEVERAPRIEPCDPDEAILLHLTDDDGDWIPVEQTGAPPLALSQALKNARGPEFEGLV
                     FATPEAPLVAALAAEPSENALAAPSGEIQAEARSRARGRRQKDAAADDPVDAKSDAKA
                     ATKSEGKAKTNGAKAQPPSDDSTPAASSRPPATNAAAATNAAAPVAASPGPKKEPVIV
                     DTLPEREVERPKVKLPVPRRGEFQLPGSALFDPPSETRVEVDRDAILEHARRLEKTLA
                     DYGVSGKVEEVRPGPTVTMYEVAFEAGTRVSKVASLADDLALGLSRKVRIIAPIPGKS
                     LIGFELPNDERQPVCLRELIEDQRFEKLSERAPLPVVLGRDIVGAPFYADLASMPHVI
                     VAGATGAGKSVGLNVMLSSLLLKRTPEDLRLLMIDPKVVELAPFDGIPHLLLPVVTDM
                     KQASTALRWAVEEMERRYQLFADAGTKNIGTYNAWVKRVQDGDIPAPIPTEVEALTVD
                     GALVTVPAAKDGNDGRPLPGKIPYIVIVVDEFADLMMQQGKEVEAAVARLAQKARAAG
                     MHVVLATQRPSVDVITGTIKANFPTRIAFRVSQRVDSKTILDEQGAELLLGRGDMLVK
                     LNGSTDTRRAQCPFVSEEEVERLTAHLRKQGSPQYHEAILLTPDEDGERQEDEEEVDA
                     RFDEAVRIVADTQRCSTSWLQRKMTIGYNRAAKIVEMMERRGMVGPPNGSRDRDVLMS
                     PL"
     gene            7492..9033
                     /locus_tag="VLJ38_14365"
     CDS             7492..9033
                     /locus_tag="VLJ38_14365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40759.1"
                     /translation="MGFALGAEACRTNEDNIRHWATTVQGPKKLIAVLTHDKYPIELR
                     VDAALALIRMKPRNGRRIGIDGSDDQPGLIAALTQLPPATRTAIISRLVPALEAEISK
                     PPPVAQAGQATPADPSVPYKDAAFALLTTDGGRLLGDPALRQSLRTALSGWIATAFAQ
                     RFDDSSQTYAVKQMVGELRAEAVKPLPNLIQPGAAKIDALAELIADYGDPQTKAQASE
                     RIVAVARDVDSDAWIKQKSPGVEAANKASKLAPTPEQFKAQMEQYQQEELLRVFASMK
                     RIGGAPVVEFLLRVAQDKNHDPKIRAGALAALQSNMDRTNTAQADAVLAVAAAPDTPD
                     QVRDVALQRAGEFPRNMVVEKLYQLFSSPSWKVRWVAAELVLKMSDTSQLPEFMDHIG
                     KAEGMAITEPLRYGSLIAEMKGSAPPAKVIEPYLGSSHPAPARLTALGYYYEKGTKND
                     LGKLSHLEEGDHTKTPTCAKDAEGCEWKCEVAGEGKRETKDIATVGEFFSYCIKPAME
                     KRTAP"
     gene            9030..9734
                     /locus_tag="VLJ38_14370"
     CDS             9030..9734
                     /locus_tag="VLJ38_14370"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU40760.1"
                     /translation="MSQDPNKKVTKSFQCREALWQKFEQMSKELECSVDYLINDAMKQ
                     YARQRGYGAAATGGGPSLPPQPQPPLPPPLPSAAPPPPPPGGPRMGGAPPPPAPPPKR
                     GGGPPPPPPPVGGRRIGTPPPLAPSRTAPPPKGGSSHPAGMNLTIHYQGEAFQVTKDR
                     FIIGRGKQTSDLTIKDPNVSRQHAMIEFSSGQYYIVDMGSTNGVEFNGQRVQRKVINE
                     GDTFRVCDHELVFTYD"
     gene            9727..10995
                     /locus_tag="VLJ38_14375"
     CDS             9727..10995
                     /locus_tag="VLJ38_14375"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU40761.1"
                     /translation="MTERGHDARQTCPPNRSRGRVRRALAGFGLVTFAFAAHARAALP
                     ASVELTRPDEPILTAPDARAPRRGAGERGARLPVYAASGGPGCESAWFEVGPLAWLCG
                     DGASPSPLPPSGPSEPAGDGLPFAYHFVGRDGSFGYRVLETAEEGDPDTQLFPGFGLA
                     ITRIAAKPGQRDPFGLTTHRLWVPLRDLGARVVPPPPLAAELADGLAVAWVNVPSASL
                     YERPAGRQKPGAFVEALTRVDVLERVELRHEAWLRVDEAAWLRERDTTSPLLKPPPAE
                     AAPDERWLDIDLARQVLVAYRGERPLFALPVSTGRGPAGTELATPPGVHRIWVKLRTS
                     DMDNLEDTDATRNYAIQAVPWVMYFERGYGLHGAFWHRGFGHVMSHGCVNLTPADAQR
                     LFAWTSPHLPAGWSAVLPTEYERGTLVRVE"
     gene            complement(11063..11389)
                     /locus_tag="VLJ38_14380"
     CDS             complement(11063..11389)
                     /locus_tag="VLJ38_14380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HSU40762.1"
                     /translation="MSKKNLSLAAAAATTLLTSSAFAQEAAAGSASSGGQAMAALGAG
                     LAVGLAVLGGGLGQGRAAAAALEGISRNPGAAPRIQTPMILGLALIESLVLFAFFIAF
                     LLQGKV"
     gene            complement(11533..12309)
                     /gene="atpB"
                     /locus_tag="VLJ38_14385"
     CDS             complement(11533..12309)
                     /gene="atpB"
                     /locus_tag="VLJ38_14385"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HSU40763.1"
                     /translation="MPEHANFLTLILAHFRETLEHNTALLGQSVVGKVQPSWHSFEPL
                     AASLFVLFFVLAIALATRARLADANEAVIPDDSLTLRTFMEAFLGFFYDLAKSTMDAE
                     RAKRYFPLIGTAATFVFFANVMALIPGLPVATSNLNITFGSGLVVFLWFNAYGLMTNG
                     MNYVKHLAGPAWWLAPLILPIELISLCVRPVTLGVRLMINMAVDHLIVSLFMGLIALV
                     VPIPLMLLTILVVVVQTMVFTLLTCVYVGLATEHEAEGHH"
     gene            complement(12314..12691)
                     /locus_tag="VLJ38_14390"
     CDS             complement(12314..12691)
                     /locus_tag="VLJ38_14390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40764.1"
                     /translation="MADAEQPNGILSLTWPVAAVAVVLTALSPFVLGAGEMRGVAVGG
                     ALATGNLLAVAFVVRGVLRGALLSWGSLAGVKFAVLLFVTYIILKNHWAGVAPLALGY
                     AALPLGIVVGQLMRSAPVRREEG"
     gene            complement(12684..12953)
                     /locus_tag="VLJ38_14395"
     CDS             complement(12684..12953)
                     /locus_tag="VLJ38_14395"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HSU40765.1"
                     /translation="MKQDWKGAGRYGTVGLELVLSVVVGLFAGQFLDRRFHTAPWLTL
                     VGTGYGIAAGVRGLYRAAQRATREAEELEQREREERKRYRNHPDG"
     gene            13034..>13429
                     /locus_tag="VLJ38_14400"
     CDS             13034..>13429
                     /locus_tag="VLJ38_14400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40766.1"
                     /translation="MRALAPAGTLLFGLLTAPVGFAQTAAPVPPVTYPKPQPSPPPAG
                     PAPAPEGPPGYYVEQGPPPPAETPAGSAPPGAAPPAGGPVYEPPPPAPNVVVFEPPPP
                     PLPRHVAPRTALWLGARVGWLVPFGSAYAL"
BASE COUNT         2280 a         4768 c         4428 g         1953 t
ORIGIN      
        1 cacgagctca gaccgagcgc acgcgccgcc tccgtttgtc ctgccggcag cgcgagcaaa
       61 gcgccgcggt gcacttcggc ttcgtaggcg gcgtaattca tgccgagccc caagatggcg
      121 gcttcgaacg gcccgagccg cacgagcggc gcgagtccga aatagagcac gtacagctgg
      181 agcagcaccg gcgtgccgcg aaaaacctcc acgtacgccg ccgccgcgaa cgacacgccg
      241 cgcgaaccga agccgcgcgc gaccgcgagc agcaacccga gcggcaacgc gagcgcgaac
      301 gcaccgagcg agatcagcag cgtgaagagc gcgccgtgca ggaacaacag gaactcggcg
      361 agatcgaagc ggcggcgcga cggcggctcg tgaacggcgc cgtcgttcgg cctgacgccg
      421 ggcgactcgc gaaccgcgcc gtccctcgcc gccactccgc cgccagcgcg ggccgaaagc
      481 tcctcctcgc gcgcgtccca caaccgatac gcctcgagaa ttcgtcggag ctccccgtcc
      541 gcgatcatcg cggcgagcgc cgcatcgagc gcgcgtaaca gctccgctcg atcacggcgc
      601 acggccgcga cgtaaacgcc tcgcgcgaca tcccccggca aacacgtgac ctcggcgagg
      661 ggacagccgt aaacgtcggc gatgacgtga tcgagcaaca ccgcgtccac gcgcccgtgc
      721 accaaatcga aatacggctc ctgctgccct tcgtagagcg cgatctcgac ggggtgctgc
      781 gtcaggatct gctgcgcgac ggtttggttc agtgtcgcca cgcgcttgcc gcgcagatcg
      841 tcgagggcgc gatacggagc gccgcggcgc acggcgagcg tctcgccgta gacgaagtac
      901 ggcaccgtga gcaagaggcg ggcgcgccgc tcgggcgtcg cttcgagacc gttcaagagc
      961 acgtcgaagt ccccgcgttc gagcgcgggt atcaagctcg accaatcgtt ttgcacgaag
     1021 cgcgccttca cgccgagccg ccggccgacc gcgcgcgcga tgtccacctc gaagccgcga
     1081 atgccgcccg gactccgcgg atcctcgaag acgtagggcg cgccgccctg caaatcgccg
     1141 ccccacgtga gctcgccacg agcgcggacc tcgtcgagca caccggcgcg cgcaggggcc
     1201 aaaaaggcga acgcggcgac gagcgcggcg acgacggcga gcacgctcgg tttcgcagcg
     1261 aaacgccacg cgaagccggc catcgcgcgc gagcctacca tggtacgctc cccttcgtgc
     1321 cgcgcccggc gccgttcctc ctcgtgcttt cgctcgcgct tgccgccgcc ggttgcgcgc
     1381 aacagcccgt gcgactcacc gaaggtccgc gcgaatacgt ctcgagcgac tacgacggcg
     1441 tgctgcggct ctggacccgt tccgcgcagc tcacgacgct cgacgcgctg gacaacgtcc
     1501 tcaccgtcac ggccacctac gaatcgtggg acttccgctg ggcgtacacg gtccgctacg
     1561 ccgaagacta ccggctcacg gtcgatcagc ggcacgcgct cctcgagcgt tcgctcgccg
     1621 acacgcacga aaagcacgaa ttttacgtcg cgctgcaggc cgaaaagtac aagtggaacg
     1681 acctcaacgc cgagcagccg gcgtggatcg tccgcctgat cgacgacacg ggcaccgaaa
     1741 ccgcccccgt tgaaatccaa accattcgcc gcccgggcgc gatcgagctc acgtactttc
     1801 cctacacctc accctggcgc agcgccttcc gcatctcctt cccgcgcgtc cgcgccgacg
     1861 gccgcccgac cattcccggc gccgcgcact ggttcggcct cagattcgcc ggcccgcaag
     1921 gcaatcaaga aatcgtctgg atggtcgaca agggctgaga tttttttggc gacctctgcc
     1981 gcgaaccgca gaacgtcgta gcagcgcccc gttccactcg ttcgcgcgcg tccgtgtcaa
     2041 ccgctcgggc caagcagagt gcagtcgtga atccgttcgg cgaagccgga gtgcagtcgt
     2101 gagatccgta cattgagcca gggtctcagc gtggcgccag ctcgggcaaa gcccgagccc
     2161 tcgacgacct cgcagtcctt ggaagaccag atctcgatcg tcacgagcag gcatacccca
     2221 cgcgacttac cggcgagccc gggacagggc cgtatcaacc cgccaccgac gcgcgaccta
     2281 aaagctcgat ccgacccaaa acctcccccg cagaaccaac gcccccgctc acaccatact
     2341 tagaagctcc agtaacggcg gcacgctcac cacgagctca tgcgtggccc ctcggttcgc
     2401 gtgaaggact agcgcgcccg tctccgctgc tcgcacgcta ccgctcgcct tttcgcgagt
     2461 gagcacggat gaagcgaagg gtaggtcccc cgggccgagc tcctctttca ccttgccgcc
     2521 gaccaggagc tcgagcttgc ctcccccgac gatgtagagg ccgtcgggca ccttgccggc
     2581 ttcgatcagg acgtcgccgg ccaagagcac gcggagctcg cagcgctcgg tgatcatggc
     2641 gcgcatgttg tcgtcgaggc ggtcaccgag cggccccatc gcggcgcccg caaacgcctg
     2701 gaaacgatcc gcgacggcgc ggagctcgtc ggcgacccac gggcacgtct cgagcacgtg
     2761 cgcgaaatcc tcgggtcgcc acacggcgac atcggcccct tcagcgagcg cgaccgcgcg
     2821 gagcggcacg ccttcagcga gcgtgccctg cgagaacacc ggttcgcccc gcgccgcgta
     2881 cccgcacgca ccctcggcga tggtcggcat cacgacgacc tgcccgcgcg tcacgagcgc
     2941 gagcccgaag ccgctcacct cctgatcggg ggcgagcact tcgagacgcg cgcgcgcggc
     3001 gagctcggct tgggtttcgg gaggcaagtc ttcgagcccg cgacaggcag cgaggagcgt
     3061 cacgtcgagc acgggcggcg gcggagccgt ctccgaaagc gcgttgactg cagcctcgag
     3121 ctcagcgggc gccgccgacg agacgggcgg ctcgcgcacg gcacctcgcg acggcggctg
     3181 agacgtggcc atcgcggcgc gtacgctcac cgagagcgaa gcggtcgtgc cctcgtcggc
     3241 gccacccaac gtgtacgtcg acgtgggcgc ttcctgctcc ggcagatcga gctccgtgac
     3301 ggagacttcc ggcagcgatt cggcgcgtcc gcgcgtcacc tcctcgacgt acggcgtctc
     3361 ctccgcgggt ggcgccgtct cgacacgcgg cgattgcccc cttcgctcca ccgtcgccac
     3421 gtgcgacgga aacggtcgct gagaggccgg cagcgtgacc ggctcggacg ggaacgtcga
     3481 acgcgcctcg ctcacctcgg gcagcggtcg cggctccggc agcggcaagc gcgggatcgg
     3541 gggcggcggc aatttgtact cgggcggcgg cggcacctgc ggcgtcgcat tgaccgagcg
     3601 ccgaagctcg cgcggcagcg acgcgcgcgc cggcgacgac accgcgcgcg ccgtactcgg
     3661 acgcaagctc gaggtcaccg gcttgggcgg cggcgccgaa acgcgcgtcg tctcgcgtga
     3721 cttgctcgag cgcgaagacg gcggctgggt gagcacgcgt tcggcgccgg gccggcgtga
     3781 gctcgtgggc gcgggaggtc gcgtgtccgc ggtgagcaac tgccgcgaga cctccgaacg
     3841 cgcatgcgtc gtctcgtcga gcagctcctc gcgataaccg tcgaggctac gcgcgtcttc
     3901 gggctcgtct tcgagctcgt ccagatcggc ggcttcgatg tcctcgacgt cctcgaggtc
     3961 gccgaggtcg ccgacggggg ccgcttcgat cgcgaccggc tcgccgtagt cgcgctcctc
     4021 ggcttcgagc gcgtccacca aactcggcga cggctccgag ctcgcgccgg tttcgacctc
     4081 gacctcgggc ggctcggcgg cgagcagcga gtccacgccg tcatcctcgt cggcctgcag
     4141 cgggaacccg gacggcggct tgagccagcg atcgatctcg ttcgcgcgcc gctggatctc
     4201 cgccgagcgg ccgaacgccc ccgcctcggc cgccgactcg gccgcgcgct tcagccacac
     4261 gaccgcatcc gcagcgccgc cgcgctccca ctgcacgcct gcagtccgga gcgcccacgc
     4321 cacgtcgtcg tcgtcgtcgt cctgggccct cggtaaggcc ggcggctccg cgctcatggc
     4381 cagaaagctc ttagcacgga ccttccagtc tccgacaagt cgtcctcgcg ggggctcgca
     4441 gggccccgga atccggggcg cgtcgagcgc gaccggccgc gtcagagcgg cgacatcagg
     4501 acgtcgcgat cccgcgagcc gttcggcgga ccgaccatgc cgcgccgctc catcatctcg
     4561 acgattttgg ccgcccgatt gtagccgatc gtcatcttac gctggagcca ggaggtcgag
     4621 cagcgctgag tgtcggcgac gattcgcacc gcttcgtcga agcgggcatc gacttcctcc
     4681 tcgtcctctt gacgctcgcc gtcctcgtcg ggggtgagca ggattgcctc gtggtactgg
     4741 ggcgagccct gcttcctcag atgagcggtg aggcgctcga cctcttcctc gctcacgaag
     4801 gggcactgcg cgcgccgcgt gtcggtcgag ccgttcagct tgacgagcat gtcgccacga
     4861 ccgagcaaga gctcggcgcc ctgctcgtcg aggatggtct tgctgtcgac gcgctgcgac
     4921 acgcggaagg cgatgcgcgt cgggaagttc gccttgatgg tgcccgtgat gacgtcgacg
     4981 ctcgggcgct gcgtcgcgag cacgacgtgc atgcccgcgg cgcgcgcctt ttgagccagg
     5041 cgcgccacgg cggcttcgac ctccttgccc tgctgcatca tgaggtccgc gaactcgtcc
     5101 acgacgatga cgatgtacgg gatcttgccg ggtagcgggc gaccatcgtt gccgtccttg
     5161 gccgcgggca cggtgacgag cgcgccgtcg acggtgagcg cttcgacttc ggtcggaatc
     5221 ggcgccggga tgtcgccgtc ttgcacgcgc ttgacccacg cgttgtacgt cccgatgttc
     5281 ttcgtcccgg cgtcggcaaa gagctggtag cggcgctcca tctcctcgac ggcccagcgc
     5341 agggccgtcg acgcctgctt catgtccgtc acgacgggca agagcaggtg cggaatgccg
     5401 tcgaagggcg caagctcgac gaccttcgga tcgatcatga gcagccggag gtcttcgggc
     5461 gtgcgcttga gcaaaaggct cgagagcatc acgttgagcc cgacgctctt gccggctccc
     5521 gtcgcgccgg cgacgatgac gtgaggcatc gacgcgagat ccgcataaaa cggcgcgccc
     5581 acgatgtcgc gcccgagcac gaccggcagc ggcgcccgct ccgaaagctt ttcgaagcgt
     5641 tggtcttcga tcagctcgcg cagacatacc ggctgccgct cgtcgttcgg cagctcgaag
     5701 ccaatcaggc tcttgcccgg gatcggcgcg atgatgcgca ccttgcgcga gagcccgagc
     5761 gcgagatcgt cggcgaggct cgcgactttg ctcacgcgcg tgccggcctc gaacgccacc
     5821 tcgtacatcg tgacggtcgg cccgggccgc acctcctcga ccttgccgct cacgccgtag
     5881 tcagcgagcg tcttctccag gcggcgcgcg tgttcgagga tggcgtcgcg atcgacttcg
     5941 acgcgcgtct cgctcggcgg atcgaagagg gcgctccccg gcagctggaa ctcgccgcga
     6001 cggggcacgg gcagcttcac cttcggacgc tcgacctcgc gctccggcaa cgtatcgacg
     6061 atgaccggct ctttcttggg gcccgggctc gcggcaaccg gtgccgcggc gttcgtcgcg
     6121 gcggcggcgt tcgttgccgg agggcggctc gatgcggccg gtgtggagtc gtcgctcggc
     6181 ggctgcgctt tcgcgccgtt cgttttggct ttgccttcgc tcttcgtggc cgccttggcg
     6241 tcgctcttgg cgtccactgg gtcgtccgct gcggcgtcct tttgccgccg gccgcgtgcg
     6301 cgcgaacgcg cttccgcctg aatctcaccg ctcggcgccg ctagcgcgtt ctcgctcggt
     6361 tcggcagcta gcgctgcgac gagcggcgcc tcgggcgtcg caaacacgag cccctcgaac
     6421 tccggaccgc gcgcgttctt gagcgcttga gagagcgcga gcggcggcgc gcccgtttgt
     6481 tccaccggga tccagtcgcc gtcgtcgtcg gtcaggtgca gcaaaatcgc ttcgtccgga
     6541 tcgcaaggct cgatgcgcgg agcgcgctcg acctccgcac gccggagctg ccgtgcttcg
     6601 cgccacgcgc cgcgcagccg caccccgagc gcgttcagtc gagcggcgag ccgctcgagc
     6661 agcgcgagcg ttcggcgaca cgcctcgatg aacgaaaacg acgcgcgccc gatcagaatg
     6721 agccccacga tcgtggagcc cacgaggaac gaccccaccg acgagaaaag ctcacgcatg
     6781 agctcgccga acagcagccc gacgttcccg ccgacgggcg catgaccgaa gacgacggct
     6841 cccgccgcgg ccacctgtgc cagcgcggcc gccacgactg cgagcgtcag gtcccccgcg
     6901 atacgaagcc acaaatctcc catgggatgc ccccggaaga gcgggatcgc gatcagcgaa
     6961 agctcgagcg gcgcgagcca agcggcgaca ccgaatccct gcgctagaaa atgggcgacg
     7021 tagcccccgg tcggcccgac ccagctcgag atctcctcgg tcgagccagg ggtaacggtg
     7081 cagctcacga gcgcgagcac caggaagagc gccccggcaa ccagcaacaa tgcagccgct
     7141 tcgcgcaagc ggccggaagg ccggtgtagg acgggactcg gcgcggcggg cccggcggtc
     7201 gcgggtcttg gcatgaacag gcgggcaccc atttgactac ctagaactac attatcctac
     7261 acgaccaggc aacttcgatc gcgcggaggt cgttctggcc gagctggcaa agccgagggg
     7321 tccgctgcgc tcaacttgag tcgcgagcga gccggcatgt agactccgtg ctcgcggttt
     7381 tagccgccgc cggaaattga gggccaagtg agtgacacga cggggcaaac catgaagact
     7441 ccacgggtat ccggcgccgt tctgagaagg gcgggggcag cagcattgct gttgggtttt
     7501 gcgctcggcg ccgaagcttg ccgcaccaac gaagacaaca ttcggcactg ggccacgacg
     7561 gtccagggac ccaaaaagct catcgccgtc ctgacgcacg acaagtaccc gatcgagctc
     7621 agagtggacg ccgcgctggc gctcatccgc atgaagccgc gcaacggtcg ccgcatcggt
     7681 atcgacggct ccgatgacca gccgggcctc atcgctgcgc tgacgcagct gccgccggcg
     7741 acgcgcaccg cgatcatctc gcggctcgtg ccggcgctcg aggcggaaat ctcgaaacct
     7801 ccgccggtcg cgcaagccgg tcaagcgacg cctgccgatc cttcggtgcc gtacaaggat
     7861 gcggccttcg cgctgctcac gaccgacgga ggccgactgc tcggcgatcc agcgctgcga
     7921 cagagcctgc gcacagcgct ttccggctgg attgccaccg ctttcgcgca acgcttcgac
     7981 gactcgtcgc agacgtacgc cgtgaaacag atggtgggcg agctcagggc cgaggcggtc
     8041 aaaccgttgc cgaacctgat ccagcccggc gccgccaaga tcgacgcgct cgccgagctc
     8101 atcgcggatt acggcgaccc gcagacgaag gcgcaagcga gcgagcgcat cgtcgcggtc
     8161 gcacgcgacg tcgactccga cgcctggatc aaacagaaga gccccggcgt cgaagccgcc
     8221 aacaaagcct cgaagcttgc gcccacgccc gagcagttca aggcgcagat ggagcagtac
     8281 cagcaggaag agctcctgcg ggtcttcgct tcgatgaagc gcattggtgg cgctcccgtg
     8341 gtcgagtttc tgctgcgagt ggctcaagac aagaaccacg acccgaagat ccgcgccggc
     8401 gcgctcgcgg cgctccagag caacatggat cgcacgaaca cggcccaagc cgacgccgtg
     8461 ctcgcggtcg cggctgcacc cgacactccc gaccaggtgc gcgatgtcgc cctccaacgc
     8521 gcgggcgaat tcccgcgcaa catggtggtc gaaaaactct accagctgtt ctccagccca
     8581 agctggaaag ttcgctgggt agcggcagag ctcgtgctca agatgagcga cacgagtcag
     8641 ctgcccgagt tcatggacca catcggcaag gccgagggca tggctatcac ggagccactg
     8701 cggtacggga gtctcatcgc cgagatgaaa ggtagtgcgc cgcccgccaa ggtcatcgag
     8761 ccgtatctcg ggagcagcca cccggcgccg gcccggctca cggcgcttgg ctactattac
     8821 gagaagggga cgaagaacga cctcggaaag ctctcgcacc tcgaggaagg cgatcacacc
     8881 aagacgccga cgtgcgccaa agacgcggag gggtgcgagt ggaagtgcga agtcgcgggc
     8941 gagggcaagc gtgagacgaa ggacatcgcc acggtcggcg agtttttcag ctactgcatc
     9001 aagccggcga tggagaaacg caccgcgcca tgagtcagga tccgaacaag aaggtcacca
     9061 agagctttca gtgtcgcgaa gcgctctggc aaaagttcga gcagatgtcc aaagagctcg
     9121 aatgctcggt ggactacctg atcaacgacg cgatgaaaca gtacgcgcgt cagcgcggct
     9181 acggagcggc ggcgacgggt ggcggtcctt cgctaccacc gcaaccgcaa ccaccgctgc
     9241 cgccaccttt gccttccgcg gccccgccgc cgccaccgcc cggtggacct cgcatgggcg
     9301 gtgctccgcc gccgcccgcg ccgccaccga agcgcggcgg tggaccgccg ccgccgcccc
     9361 cgccggtggg cgggcgtaga atcggcacgc cgccgccgct cgcgccttca cgcaccgcgc
     9421 cgcccccgaa gggcgggagc tcgcaccccg cgggcatgaa cctgacgatt cactatcagg
     9481 gtgaagcgtt ccaggtcacc aaagaccgat tcatcatcgg gcgcggcaaa cagacgagcg
     9541 atctcacgat caaagatccg aacgtttcgc gtcagcacgc gatgatcgag ttttcgagcg
     9601 gccagtacta catcgtcgat atgggctcga cgaacggcgt cgagttcaac ggccagcgcg
     9661 tccaacgcaa agtgatcaac gagggtgaca ccttccgcgt gtgcgatcac gagctcgtct
     9721 tcacgtatga ctgagcgcgg gcacgacgcc cgccagactt gccctcccaa ccgctcgcgt
     9781 ggccgcgttc ggcgcgcact cgccggcttc ggcctcgtca ccttcgcgtt cgcagcgcac
     9841 gcgcgcgcgg cgctgccggc gagcgtcgag ctcacgcgtc ctgacgagcc catcctcacg
     9901 gctcccgacg cccgagcgcc acggcgcggc gcaggcgaac gcggcgcgcg tctgcccgtg
     9961 tacgccgcga gcggcgggcc gggttgcgag agcgcctggt tcgaggtcgg tccgctcgct
    10021 tggctgtgcg gggacggcgc gagcccctcg ccgctgccgc cgagcggccc gagcgagccc
    10081 gcgggcgacg gcttgccgtt cgcgtatcac ttcgtcgggc gcgacgggtc gttcggctac
    10141 cgcgtgctcg agacggccga ggagggcgac cccgacacgc agcttttccc gggcttcggt
    10201 ctagcgatca cgcgcatcgc cgccaagccg gggcagcgcg atccgttcgg cctcacgacg
    10261 catcggctat gggtgccgct gcgcgatctc ggcgcgcgcg tcgtgccacc gccgccgctc
    10321 gccgcggagc tcgcggacgg cctggccgtc gcctgggtca acgtgccaag cgcgtcgctc
    10381 tacgagcggc cggcgggacg ccagaagccc ggcgcgttcg tcgaagcgct cacgcgcgtg
    10441 gacgtgctcg aacgcgtcga gctccggcac gaggcatggc tgcgcgtcga cgaagcggca
    10501 tggctgcgcg aacgcgacac gacatcgccc ctcctgaagc cgccgccggc cgaagccgca
    10561 cccgacgaac gctggctgga catcgatttg gcgcgtcaag tgctcgtcgc gtaccgcggc
    10621 gaacgtccgc tcttcgcgct gcccgtctcg accggacgcg gcccggccgg taccgagctc
    10681 gctacgccgc cgggcgttca ccgcatctgg gtgaagctcc gaacgagcga catggacaac
    10741 ctcgaggaca cggacgccac gcgcaactac gccatccagg ccgtgccgtg ggtcatgtac
    10801 ttcgaacgcg gctacggctt gcacggtgcg ttctggcatc gtgggttcgg ccacgtgatg
    10861 agccacggct gcgtgaacct cacgccagcc gacgcgcagc gactcttcgc gtggacgagt
    10921 ccgcatttac ccgcgggctg gtcggccgtt ttaccgaccg aatacgaacg cggaacgctc
    10981 gtgcgcgtcg agtgagcgct cacgctgagt agcgccggcg tgccgtggag cacgcagcgc
    11041 tactcggcga cgacgcagag actcagacct tgccctggag caagaacgcg atgaagaacg
    11101 cgaagagaac gagcgactcg atcagcgcga ggcccagaat catcggcgtc tgaatgcgcg
    11161 gagcggcacc cgggttgcgg ctgatgcctt cgagcgcagc ggcagcggcg cggccctgac
    11221 cgaggccccc accgaggacc gcgaggccga cggcgaggcc cgcaccgagc gcggccatcg
    11281 cttgcccgcc ggagctagcg cttccagcgg ctgcctcttg ggcaaaggcg ctcgacgtga
    11341 ggagcgtcgt ggccgcagcg gcggcaagcg acaggttctt cttggacatc gtcagggtct
    11401 ccttatctat ctttcgtcgg ggcgagcgcc ccgggcaaag tcgcgacggc tttagtgcgt
    11461 ttttcggcgg atggccagtc cttcgacgac caaaggcacg acagggcgtt tacagcccaa
    11521 tccggcttcg gttcagtgat gaccttctgc ctcgtgctcg gtggcgagtc cgacgtacac
    11581 gcaggtgagc agcgtgaaca ccatcgtctg aaccacgacc acgaggatcg tgagcagcat
    11641 gagcggaatc ggtaccacga gcgcgatgag ccccatgaac aagctcacga tcaggtgatc
    11701 gaccgccatg ttgatcatga gacgcacgcc gagcgtcacg ggccgcacgc agagcgagat
    11761 gagctcgatg ggtagaatga gcggcgcgag ccaccacgcc ggaccggcga ggtgcttcac
    11821 gtagttcatg ccgttcgtca tgagcccgta ggcgttgaac cagagaaaga cgacgaggcc
    11881 cgagccgaac gtgatgttca ggttgctcgt cgcgacgggc aaaccgggga tgagcgccat
    11941 cacgttcgcg aaaaacacga aggtcgcggc cgtaccgatg agcgggaagt aacgcttggc
    12001 gcgttcggca tccatcgtgc tcttcgcgag atcgtagaag aagccgagga aggcctccat
    12061 gaacgtgcgc agcgtgaggc tgtcgtcggg gatcacggcc tcgttggcgt cggcgagccg
    12121 ggcgcgcgta gcaagtgcga tcgcgagcac gaagaaaagg acgaagagcg aagccgcgag
    12181 cggttcgaag ctgtgccagc tcggctgcac cttgccgacg acgctctggc cgagcagcgc
    12241 cgtgttgtgc tcgagggtct cgcggaagtg cgcgagaatc agcgtcaaaa agttagcgtg
    12301 ttcgggcatc gactcatcct tcttctcgcc gcacgggcgc gctacgcatg agctggccga
    12361 ctacgatgcc gagcggcagc gcagcatagc cgagcgcgag cggggccacg cccgcccaat
    12421 gatttttgag aatgatgtag gtcacgaaga gcagcaccgc gaacttcacg cccgcgagcg
    12481 acccccagga gagcaacgcg cccctcagca cgccgcgcac gacgaaagcc acggctagga
    12541 ggttccccgt ggcgagcgcg ccacccacgg cgacgccccg catctcgccc gcgccgagca
    12601 cgaacggcga cagcgccgtg agcacgaccg ccacggccgc cacgggccag gtcaggctca
    12661 agatcccgtt cggttgctcc gcgtcagcca tcggggtgat tccggtatcg cttgcgttct
    12721 tcacgttcgc gctgctcgag ctcttccgcc tcgcgtgtcg cgcgctgcgc cgctctgtag
    12781 agcccgcgca cacccgctgc aatgccgtag cccgtgccga ccagagtcag ccagggggcc
    12841 gtgtgaaagc gacgatccag gaactgcccg gcgaataggc cgacgacgac gctcaagacg
    12901 agctcgagcc cgacggtgcc gtaccggcca gcgcctttcc agtcttgctt caccgaatca
    12961 actgctctca aagtcgaggc tcgcgggccg cgccacctag cacgtcctgc caggtggcac
    13021 tatcgttcac caaatgcgag ccctcgcacc ggcaggcact ctgctgttcg ggcttctcac
    13081 cgcccccgtc ggctttgcgc aaacggcggc ccccgtgccg cccgttacct acccgaaacc
    13141 tcagccctcg cccccgccgg ccggacctgc acccgccccc gagggaccac ccggctacta
    13201 cgtcgaacaa gggccaccac cgccggctga gactccggcg ggttccgcgc cgccgggcgc
    13261 agcaccgccg gcaggcggac cagtttatga acccccgcca ccggcgccca acgtcgtggt
    13321 cttcgagccg ccaccgccgc cgctgccccg acacgtggca ccacgcacgg cgctgtggct
    13381 cggagcgcgg gtcggctggc tcgtgccctt cggcagcgcg tatgcgctc
//
LOCUS       DATIML010000832         7592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3642913, whole genome shotgun sequence.
ACCESSION   DATIML010000832 DATIML010000000
VERSION     DATIML010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7592
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3642913"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VLJ38_14405"
     CDS             <1..298
                     /locus_tag="VLJ38_14405"
                     /inference="COORDINATES: protein motif:HMM:NF024948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HSU40767.1"
                     /translation="RGAHEAAALYRSLERLLAARGVPRPVSTPPLAHARALESLGHPL
                     GAETVELTEHYLRVRFGGEALDHAARRAYLERLQALRGIPMDSKPQPGAAASPP"
     gene            complement(375..884)
                     /locus_tag="VLJ38_14410"
     CDS             complement(375..884)
                     /locus_tag="VLJ38_14410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40768.1"
                     /translation="MSTRQQRRKSLSRAAAPASVSWVALVAATTLGIGGVQRVRAAVS
                     ADPRELGDSHGDYRLIVQSYAPSSFGTGRLPVGRARPLASTQRAITPEQLARGVSVDM
                     LGLAKPDVPATETPVIVAWVEKGRADLAFDGFEARPGVDAFYGVAASADATSALRSTP
                     IVLKRRGIG"
     gene            complement(1048..2463)
                     /locus_tag="VLJ38_14415"
     CDS             complement(1048..2463)
                     /locus_tag="VLJ38_14415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40769.1"
                     /translation="MRRTDPLLGVVLALVAACVEAPRPLPAPAVTATSQAAAPRSSAS
                     TLKGTPPDPADGRQAVVDATLKQVAAARQLPATGPIRSEVIGRVELLGRMKKELLEDL
                     QPELLEGSSELLFALGAAGADLDYLGSTLTLLATQLAGFYDPRAKELVLLDDLGMEAQ
                     QATLWHELIHGLQDQHYDLAGHMKWSAGHGDALAAVQSLAEGDATSGMMDIMLLPRGQ
                     SALDLPEGMLAGSLGMMEAMPEIASVPRILKRSIVAPYVDGLSFVHAMRRAGGWAAVD
                     AAWRDLPTTSEQILHPDKYRAHETAETVARPVGPAPELGHAIYTDVLGEQTVRLAFEE
                     WVPRVTATEAAGGWAGDSVAVFADGDRRAVGIHLRYDDEAHARRGFEAAARGALLAEA
                     ETWPSDRPPPNVPSAAAAAAVARRSVCRARDRRGPFAVVWRGRDLGVALGPYQRAATV
                     TRSAGDCALGLRWAESIAAMR"
     gene            complement(2460..3113)
                     /gene="rpe"
                     /locus_tag="VLJ38_14420"
     CDS             complement(2460..3113)
                     /gene="rpe"
                     /locus_tag="VLJ38_14420"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF004076.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HSU40770.1"
                     /translation="MVRIAPSILSADLGRLAEDVRDAEAAGADWIHVDVMDGRFVPNI
                     TFGPAIVRAVRKATKLPIDVHLMVVEPERHLAAFAEAGADGLSVQVEAVTHLQRTLHS
                     IRELGKRAGAVLNPHTPEENLRYVLPDLDLVLVMTVNPGFGGQAFLPAMLPKIRRVRE
                     LIDQAKQPIDLEVDGGIAPDTVGAVVEAGARVLVAGHSVFDQPDRAAAIRALRAAAA"
     gene            3249..3686
                     /locus_tag="VLJ38_14425"
     CDS             3249..3686
                     /locus_tag="VLJ38_14425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSU40771.1"
                     /translation="MITRPLGKQDYDHIVQIIDRWWGGPTTALAHPIFFYELGSMARV
                     VEHDGILVGFLLGFVAPGPPKTGYVHLVGIHPDYRRRGVGKVLYQTFEEDARAAGCTR
                     LKAITTVGNEGSIAFHKATGWSVTYVEDYAGPARPRIVFHKNL"
     gene            3710..4216
                     /locus_tag="VLJ38_14430"
     CDS             3710..4216
                     /locus_tag="VLJ38_14430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSU40772.1"
                     /translation="MPDSAEIVASDLRNIGLFGALSDEVLAFLASMLTVVKPTIGETI
                     FREGDEANAMYVVLAGEMEVTKKSRGAVDARVAVLGPGDWFGEMSIVDIQPRSATVRA
                     LAPGRLIRISAGDLDALYRHDVRSYAIIVLNLARELSRRLRVADGILADLIANVMDSY
                     LAKRPSAG"
     gene            complement(4186..4785)
                     /locus_tag="VLJ38_14435"
     CDS             complement(4186..4785)
                     /locus_tag="VLJ38_14435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40773.1"
                     /translation="MRRSLTLALIIAASSPAGCFLNPFPELPGDSSSEDLPDPPTTGN
                     AAGGGTSTAAGGSVSASTGGTSIATPGTGGTNSMGTGASTSGGTSTGGLSGGADGAAG
                     SGFMSGAGTNGGGQSGGGGAGMAGGSGTAGIAGGSGMGSAGASAGFGGRAGGAGAAGS
                     ANVGGMAGVSGMPGAAGHAASEAFAAGSNAHPADGRFAR"
     gene            complement(4914..5744)
                     /locus_tag="VLJ38_14440"
     CDS             complement(4914..5744)
                     /locus_tag="VLJ38_14440"
                     /inference="COORDINATES: protein motif:HMM:NF014234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HSU40774.1"
                     /translation="MNVTVIGLGLLGGSFALGLREIEPNARITAVDLQEVLELPAARG
                     AADGFIRASDAAAVDAAVAAADLTLLAAPVRRIVAIMPRVLAKARVLTDCGSTKRAIV
                     AAAADSPRRGRFVPGHPMAGAPAGSIELARPDLFRGRRWLLCPEASDRDAVTLVEDLV
                     RRLGAEPFRIDAAVHDRAVALTSHATQLVASALAAVALESGAQVTAGPAFEGATRVAG
                     GPAEMWGDILATNASEIEQALGALTREIDLVRSGLRADPPDVEPALSLLARARTLRRR
                     "
     gene            complement(5741..6646)
                     /locus_tag="VLJ38_14445"
     CDS             complement(5741..6646)
                     /locus_tag="VLJ38_14445"
                     /inference="COORDINATES: protein motif:HMM:NF037053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40775.1"
                     /translation="MIVVMEAGVTENAIESVIAFLVSAGFDVHRSSGATRTTLGVVGD
                     VTENDAAVVRELDGVAQVVRVTEPFRLASRRFRQRGSVVEGPWGIIGGERPWIAIEPI
                     GPAPRHERSRPVAPDSESDGPPSAELPYAVAAGRPFDAAVTRSHLTPDAVGALACLSM
                     HPQPSAQPYPVRFIARPPSAGANAWIGAAERELERAECQVVLLECGGEYPSGARTLEV
                     AAIARAKQRTHLPIVVDVPTIAERARYSAPVACAAIAAGADGIVLRVWVGRAGEVARV
                     PATLAWADAVELAERVRATAAAVRG"
     gene            7072..>7592
                     /locus_tag="VLJ38_14450"
     CDS             7072..>7592
                     /locus_tag="VLJ38_14450"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HSU40776.1"
                     /translation="MFTLANAHGLKAKITNYGATLTALEVPDRNGKLADIVLGFDDLA
                     GYEHGNAFFGATVGRVANRIRNATFSLAGKTYHLAANDPPHALHGGPKGFSKVVWDAQ
                     PVETSAGPSLELTYVSKDGEEGYPGTVTAKTTYTLTDANELKVEMVATTDRTTLVNLA
                     NHSYWNLAGHDAGP"
BASE COUNT         1203 a         2725 c         2521 g         1143 t
ORIGIN      
        1 gcgcggcgct cacgaagccg cggcgctata tcgttccctc gagcggctcc tcgccgcgcg
       61 cggagtgccg cgacccgtga gcacgccgcc actcgcccac gcccgcgcgc tcgaatccct
      121 cggccatccc ctcggcgccg aaacagtgga gctcaccgag cactacttgc gcgtgcgctt
      181 cgggggtgag gcgctcgatc acgccgcacg ccgcgcttac ctcgaacgcc tgcaggcgct
      241 gcgtgggatt cccatggact cgaagccgca gccgggcgcc gccgcgagcc cgccgtaatg
      301 gcgccgctgc gtgccgcctg ctcttgcgat cgggcggcgt tcggcgtgca accacgccgc
      361 cggcggcgtc ggtgtcagcc gattccgcgt cgtttcaata cgatcggcgt cgaacgcagc
      421 gcggacgtcg cgtcagcgct ggccgccacg ccgtaaaacg catccacgcc gggccgcgcc
      481 tcgaagccgt cgaacgccag atcagcccgg cccttttcga cccacgcgac gatcaccggg
      541 gtctcggtcg ccggcacatc cggcttggcg aggccgagca tgtcgaccga aacaccgcgc
      601 gcgagctgct cgggcgtgat ggctcgctgc gtcgatgcga gcggacgcgc gcgcccgaca
      661 ggcagccgtc cggtgccaaa gctcgatggc gcgtacgact gcacgatcaa acggtagtcc
      721 ccgtgtgaat cacccagctc gcgtggatcc gcgctaacgg ctgcgcgcac acgctgcacc
      781 ccaccgatgc cgagcgtcgt ggctgcgacc aacgccaccc aggacacact ggccggagcg
      841 gcagcgcgcg aaagcgattt gcgtcgttgc tggcgggtgc tcacgaggac ctgctttccg
      901 gatgaacgcg cgaggggagc gaaaggtttc cctgcgacga agaattcata agcaggtttc
      961 attccattca cggaccagtc ccgtccggcc ggtcggctgt cggcggtgcg cgtgctaggc
     1021 gcgggcgcaa aagcggcgaa ttttggctca gcgcattgcg gcgatgctct cggcccagcg
     1081 gaggccgagc gcgcaatcgc ctgcgctgcg tgtgacggtg gcggcacgtt gatacgggcc
     1141 gagcgcgaca ccgagatcgc ggccgcgcca aaccactgca aatgggcccc gacgatcgcg
     1201 ggcccgacag acgctccggc gggcgacggc ggctgccgcc gcggcgctcg ggacgttcgg
     1261 cggcggcctg tcggagggcc aagtctccgc ttccgcaagc agcgcgcctc gcgcggcggc
     1321 ctcgaagccg cgccgcgcgt gtgcctcatc gtcgtaacgc aggtggatcc cgaccgcccg
     1381 ccggtcgccg tcggcgaaca cggccacgct gtctccagcc cagccgccgg cagcctcggt
     1441 ggccgtcacg cgaggcaccc actcctcgaa ggccaatcgc accgtctgct cgccgagaac
     1501 gtcggtgtag atcgcgtgcc cgagctccgg cgcaggaccg accggccgtg cgacggtttc
     1561 ggctgtctca tgcgcgcggt acttgtccgg gtgcaggatc tgttcgctcg tcgtcggtag
     1621 atctcgccac gcagcatcga cggccgccca cccgcccgcg cgtctcatcg cgtgcacgaa
     1681 cgaaagcccg tcgacatacg gcgccacgat cgagcgcttc aaaatgcgcg gcacggacgc
     1741 gatttcgggc atcgcctcca tcatgccgag actgccggcc agcatgcctt ccgggagatc
     1801 gagcgcgctc tggccgcgcg gcagcagcat gatgtccatc atgccgctcg tagcgtcgcc
     1861 ctcggcgagg gactgcacgg ccgcgagcgc gtcaccgtgc cccgcgctcc acttcatgtg
     1921 ccccgcgagg tcgtagtgct ggtcctgcag cccgtgaatg agctcgtgcc aaagcgtcgc
     1981 ctgctgcgct tccatcccga ggtcgtccag caacacgagc tctttcgcgc gcggatcgta
     2041 gaagccggcg agctgcgtgg cgagcagcgt gagcgtgctg cccaggtagt cgaggtcggc
     2101 gcctgccgcc ccgagtgcaa acaacagctc actcgagcct tcgaggagct caggttgtaa
     2161 atcctcgagc agctccttct tcatgcgacc gagcagttcg acgcggccga tgacctcgct
     2221 tcgaattggg ccggtggcgg gcaactgccg agccgccgcc acttgtttca gcgtcgcgtc
     2281 gacgaccgct tgacgcccgt cagcggggtc gggcggcgtg ccctttagcg tcgaggcgct
     2341 cgatctcggc gcggcggctt ggctcgtggc ggtaacggcg ggtgcgggca gcggacgagg
     2401 cgcttcgacg cacgctgcga cgagagcgag aactaccccg aggagaggat ccgtccgtct
     2461 caagccgccg ccgcccgcag ggcgcggatc gcggccgctc gatcgggctg atcgaacacg
     2521 gaatgtcctg ctacgagcac gcgggctccc gcttccacta cggcgcccac cgtgtccggg
     2581 gcgatcccgc cgtcgacctc gagatcgatc ggttgtttcg cctgatcgat gagctcgcgc
     2641 acgcgcctga tcttgggcaa catcgccggc aaaaacgcct gaccgccgaa ccccggattg
     2701 acggtcatca cgagcacgag atccagatcc ggcagcacgt agcgcaggtt ctcctcgggt
     2761 gtatgcggat tgagcactgc gccggcacgc ttgccgagct cgcgaatcga gtgaagcgtc
     2821 cgctggaggt gcgtcaccgc ttcgacttgc acgctgagcc catcggcgcc cgcttccgca
     2881 aaagccgcga gatgccgctc gggctcgacc accatgagat gcacgtcgat cggcagcttc
     2941 gtcgcttttc gcacggcgcg cacgatggcg gggccgaagg tgatgttcgg gacgaaacgt
     3001 ccatccatca cgtcgacgtg gatccagtcg gccccggccg cttcggcgtc gcgtacgtct
     3061 tcggccaggc gtccgagatc cgcactcaaa atcgaggggg caatccgcac cacattcacg
     3121 gaccttcgat tacccgagga ctggcgcgcg cgccagcaga tgacagggcg cgtgcttgag
     3181 gccccgctcg tactacgctc taccggaagt gttaagctcc ggttcctctc accttcgttt
     3241 cggaagcaat gatcacccgc ccgctcggta agcaggacta cgaccacatc gtccagatca
     3301 tcgaccgctg gtggggcggt ccgacgacgg cgctggcgca cccgatcttc ttttacgagc
     3361 tcgggtcgat ggcgcgcgtc gtcgaacacg acggcatcct cgtcggcttc ctgctcggtt
     3421 tcgttgcgcc gggcccgccg aaaacgggat acgtgcacct ggtcgggatt catcccgatt
     3481 accggcgccg cggcgttggc aaagtgctct accagacctt cgaagaggac gcgcgcgcgg
     3541 cgggctgcac ccggctcaag gccatcacga ccgtcgggaa cgaaggctcc atcgctttcc
     3601 acaaggcgac gggctggagc gtgacgtacg tcgaagatta tgcggggccc gcgcggccgc
     3661 gcatcgtgtt ccacaagaat ctctgagcgt gttttcgact tgaagagcca tgccggactc
     3721 ggccgaaatc gtagcttccg acctccggaa catcgggctt ttcggggcgc tgagcgacga
     3781 agtgctcgcg ttcctcgcga gcatgctcac ggtcgtcaaa ccgacgatcg gggagaccat
     3841 ttttcgcgag ggtgacgagg cgaacgcgat gtacgtcgtg ctcgcgggcg agatggaggt
     3901 cacgaagaag agccgtggcg ccgtcgatgc gcgcgtcgcc gtgctcggcc ctggcgattg
     3961 gttcggcgag atgagcatcg tcgacattca gccgcgctcg gccacggtgc gcgcgctcgc
     4021 gccaggtcgc ctgattcgca tcagcgcggg cgatctcgac gccctgtatc gtcacgacgt
     4081 gcgctcgtac gcgatcatcg tgctcaacct ggcgcgcgag ctcagtcgtc gcttgcgcgt
     4141 cgccgacggc atcctcgccg acctgatcgc gaacgtgatg gacagctacc tcgcgaaacg
     4201 tccgtcggcg gggtgagcgt tcgagccggc ggcgaaagcc tccgaggcag cgtggccggc
     4261 tgcgcccggc ataccggata cccccgccat tccgccgaca ttcgccgagc cggccgctcc
     4321 cgcgcctcct gcgcggccgc caaagccggc actcgcgccc gcgctcccca tgccgcttcc
     4381 gcccgcgatg ccggccgtgc cgcttccgcc tgccatgccg gccccgccac caccgctctg
     4441 cccgccgccg ttcgttcccg caccgctcat gaacccgcta ccggcagcgc cgtccgcgcc
     4501 gcccgacagc cctccagtcg acgtgccccc actcgtggag gccccggtcc ccatggaatt
     4561 cgtgccgccg gttccgggcg tcgcgatgct cgttcctccg gtgctcgcgg agacactgcc
     4621 cccagccgcg gtcgacgtgc cgccgccggc ggcgttgccc gtggtcggcg ggtctgggag
     4681 gtcctcgctg ctgctgtccc ccggcagctc gggaaatggg ttgagaaagc acccggccgg
     4741 cgacgatgcc gcgatgatga gcgcaagcgt gagcgagcga cgcataggag ctctgtgcca
     4801 agtggagcac atttcgggcc acgagccgaa cgtaaaatct gcgtcgaagc gtgccgcccg
     4861 ccgccgcaac tggcacaacg tggcacagaa acgactccgg cggccctggt aagctagcgg
     4921 cggcggagcg tgcgcgcgcg ggcgagtagg ctgagtgcgg gctcgacgtc cggcggatcg
     4981 gcgcgcaacc ctgagcgcac taagtcgatt tcgcgcgtca gagcaccgag cgcctgctcg
     5041 atttcgctcg cgttggtggc cagtatgtcg ccccacatct ccgcggggcc gccggcgaca
     5101 cgcgtcgcgc cttcgaaagc cgggccggcc gtcacctggg cgccgctttc gagcgcaacc
     5161 gccgcgaggg cgctggcgac gagctgcgtc gcgtggctcg tgagcgcgac cgctcgatcg
     5221 tggacggccg cgtcgattcg gaacggctcc gcgccgaggc ggcgcaccag gtcttcgacg
     5281 agcgtcacgg catcgcgatc gctcgcttcg gggcagagca accagcgacg gccgcggaat
     5341 aggtcgggac gcgcgagctc gatgctgccg gccggggccc cagccatcgg atgacccggc
     5401 acgaagcggc cacggcgcgg cgaatcggcc gccgccgcga cgatcgcgcg cttggtcgaa
     5461 ccgcaatcag tgagcacccg cgccttcgcg aggacgcgcg gcatgatcgc gacgatgcgg
     5521 cgaacgggcg cggcgagcag ggtgaggtcg gccgcggcga ccgccgcgtc gaccgccgca
     5581 gcgtcagagg cgcggatgaa accatctgcg gcgccgcgcg ccgctggaag ttcgagcacc
     5641 tcttgcaggt ccacggccgt gatccgcgcg ttcggctcga tttcgcgcag gccgagcgcg
     5701 aaagagccgc cgagcagacc aagcccgatg accgtgacgt tcatccccgt accgcggcag
     5761 ccgtcgcccg gacgcgctcg gcgagctcga cggcgtccgc ccaggccagc gtcgccggca
     5821 cgcgcgcgac ctcacccgct cgtcccaccc acacgcgcag cacgatgccg tcggcgcccg
     5881 ccgcgatcgc ggcgcacgcg accggcgcgg aatagcgcgc gcgttcggcg atcgtcggca
     5941 cgtcaacgac gatcggcaga tgcgtgcgct gcttggcgcg cgcgatcgct gccacttcga
     6001 gggtacgcgc gccgctcggg tactcaccgc cgcactcgag cagcacgact tgacactcgg
     6061 cgcgctcgag ctcgcgctcg gccgcgccga tccaggcatt cgcgccggcg ctcggcggcc
     6121 gcgcgatgaa acgcacgggg tagggctgcg cggacggctg tgggtgcatc gagaggcacg
     6181 cgagcgcgcc cacggcgtcg ggcgtgaggt gcgagcgcgt gacggcggca tcgaacggcc
     6241 gccccgcggc cacggcatac ggcaactccg ccgagggcgg tccgtcgctc tcgctatcgg
     6301 gcgcgaccgg ccgggagcgt tcgtggcgcg gcgccggacc gatcggctcg atcgcaatcc
     6361 acggccgttc gccgccgatg atgccccaag gtccctcgac gacgctgccg cgctggcgaa
     6421 agcgacgtga cgcgagccga aagggctccg tgacgcgcac gacctgcgcg acgccgtcga
     6481 gctcgcgcac gaccgcggcg tcgttttcgg taacgtcacc tacgacgccg agcgtcgttc
     6541 gcgtcgcgcc gctcgaacgg tgcacgtcga accctgcgct caccaggaac gcgatgacgc
     6601 tctcgatcgc attctcggtc accccagctt ccatcacgac gatcatcggt cctcgaagag
     6661 ctctcgtacc ctaagcacgc cgtcgacagt attgccgcgt tcgacgcgcc tgaaaggggg
     6721 tcgatcgcga gtttcggctc ggaggccgcc cacatcgagc ttgagagccc gtctggctta
     6781 ttgctacggt tcgcccggcc gaagacccgg ccatcccgga ggataacggt tttgcgaacg
     6841 accgaaggac gaagcgcacg gacttgggca ctggttgccg cactcggcgt ggccctagct
     6901 tgttcggcac cccaaaccac ggccgtcacg ccgccgccgc cggccattag cgccgcccca
     6961 ccccttgggg taacagcacc gcccgccgct ccgccgccgg cgcaagcctc gcccgcacga
     7021 ggcgcgatcg agcaggcggc gtacggcaag gccgacggaa aggacgtctg gttgttcacc
     7081 ctcgcgaacg ctcacggact caaagccaag atcacgaatt acggcgcgac actcaccgcg
     7141 ctcgaagtcc ccgatcgcaa cggcaagctc gcagacatcg tgctcgggtt cgacgacttg
     7201 gctgggtacg aacacgggaa cgcgttcttc ggcgccacgg tcggtcgcgt cgcgaaccgc
     7261 attcggaacg ccacgttttc gctcgctggc aagacgtatc acctcgccgc caacgatccg
     7321 ccgcatgcct tgcacggcgg tcccaagggc ttttccaagg tggtttggga cgcccagccc
     7381 gtcgagacgt cggccggacc gtcactcgag ctcacctacg tctcgaaaga cggcgaagaa
     7441 ggctatcccg gcaccgtcac ggccaagacg acgtacacgc tcaccgacgc gaacgagctc
     7501 aaagtcgaga tggtcgctac caccgaccgc acgacactcg tgaacctcgc caaccattcg
     7561 tattggaacc tcgcgggtca tgacgctggc cc
//
LOCUS       DATIML010000833         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3927054, whole genome shotgun sequence.
ACCESSION   DATIML010000833 DATIML010000000
VERSION     DATIML010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3927054"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2159
                     /locus_tag="VLJ38_14455"
     CDS             <1..>2159
                     /locus_tag="VLJ38_14455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU40777.1"
                     /translation="LPEEIIGRHFSTFYRPEDAWKCEMELDVATRHGRVEDEGYRVRK
                     DGTLFWASVVITCLRDEHGEIVGFAKVTRDLTERKRAEEALRASDERFRLLVESVKDY
                     AIFMLDPSGRVATWNVGAERIKGYRADEIIGQHFSRFYPEEDVRAGKCDRELELAERD
                     GRFEDEGYRVRKDGTRFWANVVITPLRDAADKLIGFAKVTRDLSERRAAEEERLRVGR
                     LASERVRALTEFSEALASARSTDDVGRVVMERGAAFVGGDGSTLYLVDERTRELVLFA
                     ERNANRRLIERLARIPPAENPFYAIATGVRDAVWIENQADYDAFFPALARFVTEETRA
                     QAFAGVPLVAEGRAMGIITVGFREPRRFNADDREFIGTFARQAAQAFARARGLEAAQA
                     AAVLAERLRVSLATTMRSIGDAVIATDAAGAITLMNGVAEALTGYSEAEARGKPLPEV
                     FRIVNEHTRAEVPSPVARVLETGGVVGLGNHTLLVRRDGKEIPIDDSGAPIRAEQGPI
                     EGVVLVFRDVTERKREESRRAFLAEASAELSRSLDYEVTVGRVAELAVPRLADWCAVD
                     LVVAGESRTRQLAVAHVEPEKVALVRELDAKYPPDLDAPSGVPNVLRTARSEVYRELP
                     DELLVSACVDAEHVRLARALGPRSAMIVPLVLQGRVLGTMSFVFGDSGRVYSDQDLGV
                     AEELARRCATAIENALLYSSEQRARRFADVANRAKDE"
BASE COUNT          350 a          725 c          751 g          333 t
ORIGIN      
        1 ctgcccgagg agatcatcgg ccgccacttc tcgacgttct atcgacccga ggacgcgtgg
       61 aagtgcgaga tggagctcga tgtcgcgact cggcacgggc gcgtcgagga cgagggctat
      121 cgcgttcgca aggacggcac gttgttttgg gccagcgtcg tcatcacgtg cttgcgcgac
      181 gaacacggcg aaatcgtcgg tttcgccaag gtcacgcgcg atctcaccga gcgcaagcgc
      241 gccgaggagg ccttgcgtgc gagcgatgag cgcttccggc tgctggtcga gagcgtcaaa
      301 gactacgcca tcttcatgct cgatccgagc ggccgggtcg cgacctggaa cgtcggcgcc
      361 gagcgcatca aaggctaccg cgcggacgaa atcatcggtc agcatttttc gcgcttttat
      421 ccggaggagg acgtgcgagc cggaaagtgc gaccgggagc tcgagctcgc cgaacgcgac
      481 ggccgcttcg aggacgaggg ctatcgcgtt cgcaaggacg ggacgcgctt ttgggccaac
      541 gtcgtgatca cgccgctccg cgacgccgcc gataagctca tcggtttcgc gaaggtcacg
      601 cgcgatctca gcgagcggcg cgcggccgaa gaggaacgcc tgcgcgtcgg acggctggcg
      661 agcgaacgtg tgcgcgcgct caccgagttc tccgaggcgc tcgcgagcgc ccgctcgacc
      721 gacgacgtag ggcgcgtcgt gatggaacgg ggcgcagcgt tcgtcggcgg cgacggcagc
      781 acgctttact tggtcgacga gcgcacgcga gagctcgtgc tcttcgccga gcggaacgca
      841 aaccgccgct tgatcgagcg actcgcgcgt attcccccgg ccgaaaatcc gttctacgcg
      901 atcgcgacgg gcgtgcgcga cgcggtctgg atcgaaaatc aggccgacta cgacgcgttc
      961 ttcccggccc tcgcccgctt tgtcaccgag gagacgcgcg ctcaggcttt cgcaggcgtg
     1021 ccgctcgtcg ccgaggggcg tgcgatgggc atcatcaccg tcggtttccg cgagccgcgc
     1081 cggttcaacg ccgacgatcg cgagttcatc ggcacgtttg cacgccaagc ggcgcaggca
     1141 ttcgctcgcg cccgaggcct cgaagcagct caagcggcgg cagttctcgc agaacggctg
     1201 cgggtctcgc tcgccaccac gatgcgcagc atcggcgacg cagtgatcgc caccgacgcc
     1261 gcgggtgcga tcaccctcat gaacggcgtc gcggaggcgc tcaccggtta ctcggaggcc
     1321 gaggcccgcg gaaagccctt gccggaggtg tttcgcatcg tcaacgagca cacgcgcgcc
     1381 gaggtcccga gcccggtcgc aagggtgctc gagaccggcg gcgtggtggg gctcggcaat
     1441 cacacgctgc tcgtgcggcg agacggcaag gagatcccca tcgacgacag cggcgcgccc
     1501 attcgcgccg aacagggccc gattgaaggc gtggtgctcg tgtttcgtga cgtgacggag
     1561 cgcaaacgcg aggagtcgcg gcgggcattc ctcgccgaag cctccgctga gctcagccgc
     1621 tcgctcgact acgaggtcac cgtcgggcgc gtggccgagc tcgccgtgcc gcggctcgcc
     1681 gactggtgcg ccgtcgatct cgtcgtcgcc ggtgaatcga ggacgaggca gctcgcggtc
     1741 gcgcacgtcg agccagaaaa ggtcgcgctc gtgcgcgagc tcgatgcgaa atacccgcct
     1801 gacctcgacg cgccgagcgg cgtgcccaac gtgctccgca ccgcgcgctc cgaagtatat
     1861 cgcgagctcc cggacgagct gctcgtcagc gcgtgcgtcg atgccgaaca cgtgcggctc
     1921 gcgcgcgcgc tcgggccgcg ttcggcgatg atcgtgccgc tcgtcctgca gggtcgcgtg
     1981 ctcgggacga tgagcttcgt gttcggcgac tcgggccgcg tctacagcga ccaggatctc
     2041 ggcgtcgccg aggagctcgc tcgacgctgc gccacggcca tcgagaacgc actgctctac
     2101 agctccgagc agcgcgcgcg gcgcttcgcc gacgtcgcca atcgcgccaa ggacgagtt
//
LOCUS       DATIML010000834         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3927090, whole genome shotgun sequence.
ACCESSION   DATIML010000834 DATIML010000000
VERSION     DATIML010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3927090"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1506
                     /locus_tag="VLJ38_14460"
     CDS             <1..1506
                     /locus_tag="VLJ38_14460"
                     /inference="COORDINATES: protein motif:HMM:NF014801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HSU40778.1"
                     /translation="VDTDTGRVVLDQSLNYGSALPEYHSPHGFVENADPAVKHSDPLM
                     WVEALDRLFESIRASGFDLGTVAGVSGAGQQHGSVYLKTPLAKVTWTTKSKLAEQVRP
                     LLSRPTSPIWMDSSTGADCAAIAEAVGGDAVVTRISGSRATPRFTGPQIRKFARESPA
                     AYAATTEIHLVSSFIAGVLAGASAPIDFGDGAGMNLLDLAALGWSEPLLAATAPGLAA
                     KLRAPVASTTRVGDIAPYFVERYGFRRGTPVVAFTGDNPSSLVGMGAALPGTAIASLG
                     TSDTIFAAMREPKTDPRGFGHVFGNPAGGFMCLICFSNGSLAREAVAERVKLDWPAFE
                     RAIVTESQPGNGGNFMLPYFVPEITPRIGKPDVRLFGSADFVAWRAPALAARAIVEAQ
                     ALAMRRYSDWIGETPSSLLATGGASKNRGILQVLADVFQAEVRTLAVANSSALGGALR
                     AAQAVEGRSFAELFAPFCAPGAERTTPNRAVTGVYEELGARYAEEMTKLGG"
     gene            1617..1952
                     /locus_tag="VLJ38_14465"
     CDS             1617..1952
                     /locus_tag="VLJ38_14465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40779.1"
                     /translation="MTRVQRLLLALTFVSALGCASNEKQCQRVCEWEERCVLGAVGVE
                     DCASQCINDTESRSADCQDAFDSFASCTARNESCPGVDQQCGSEASRVIEKCDCTNAT
                     GPMAELCGK"
BASE COUNT          334 a          762 c          725 g          338 t
ORIGIN      
        1 gtcgatacgg acaccggccg tgtcgtcctc gaccagagcc tcaactacgg tagcgcgcta
       61 cccgagtatc actcgccgca cggcttcgtc gaaaacgccg acccggcggt gaagcactcc
      121 gatccgctga tgtgggtcga agcactcgat cgcttgttcg agtccattcg cgcgagcggc
      181 ttcgatctcg gcacggtggc cggcgtcagc ggcgcgggcc agcagcacgg ctccgtgtac
      241 ctgaagacgc cgctcgccaa ggtcacctgg acgacgaagt cgaagctcgc cgagcaagtg
      301 cgaccgctcc tgagccgacc gacgtcgccc atctggatgg acagctcgac gggcgcggac
      361 tgcgcggcca tcgcggaggc ggtcggcgga gacgcggtcg tgacgcgcat cagcggctcg
      421 cgcgcgacgc cccgcttcac gggcccacag attcgcaagt ttgcgcgcga aagccccgcc
      481 gcctatgccg cgacgaccga aatccacctc gtgagctcgt tcatcgcggg cgtgctcgcg
      541 ggcgcgtcgg cgccgatcga cttcggcgac ggcgcgggca tgaacctgct cgatctggcg
      601 gcactcggct ggagcgagcc gctgctcgcc gcgacggcgc cgggcctcgc cgccaagttg
      661 cgagcgcccg tggcttcgac cacccgagtc ggcgacatcg cgccgtactt cgtcgagcgt
      721 tacggctttc gccgcggcac tccggtcgtc gccttcacgg gcgacaaccc gagcagcctc
      781 gtcggcatgg gcgcggcgct gcccggcacc gccatcgcga gcctcggtac gagcgacacc
      841 atctttgcgg ccatgcgcga gccgaagacc gatccgcgcg gcttcggtca cgtcttcggc
      901 aacccggctg gcggcttcat gtgcctcatc tgcttctcga acggctcgct cgcccgcgaa
      961 gccgtcgccg agcgcgtgaa gctcgattgg cccgcgttcg aacgcgccat tgtcaccgag
     1021 agccagcccg gcaacggcgg caatttcatg ctgccgtatt tcgtccccga gatcacgccg
     1081 cgcatcggca agcccgacgt gcggctgttc ggttcagcgg atttcgtcgc atggcgtgct
     1141 ccggctctcg cggcgcgcgc gatcgtcgaa gctcaagcgc tcgcgatgcg ccgctactcc
     1201 gattggatcg gcgagacccc gagcagcctg ctcgcgacgg gcggggcctc gaagaatcgc
     1261 ggcattttgc aggtgctcgc cgacgtcttc caggccgagg tccgcacgct cgccgtcgcg
     1321 aactcttcgg cgctcggcgg cgcgctgcgt gcggcgcaag cggtggaagg gcgctccttc
     1381 gccgagctct ttgcgccctt ctgtgcgccc ggcgccgagc gtacgacgcc gaatcgggcg
     1441 gtgacgggcg tctacgagga gctcggcgcg cgctacgccg aggaaatgac gaagctcggc
     1501 ggttgaacgc gagcaggccg agcggccctg cccgcttcgt gcggctcagc gcgggcaagg
     1561 tgggcgcatg tgtgggggat cgtgctagct tccgcgcgcc ttcgcccatg cctgccgtga
     1621 ctcgcgttca acgcctcctt ctcgccctca cgttcgtctc ggcgctcggc tgcgcttcga
     1681 acgagaaaca atgtcagcgc gtgtgcgagt gggaggagcg ctgcgtgctc ggcgccgtcg
     1741 gcgtcgagga ttgtgcgtcc cagtgcatca acgacaccga atcgcgcagc gccgactgcc
     1801 aagacgcctt cgactccttc gcgagctgca cggcccgcaa cgaaagctgc cccggcgtcg
     1861 accaacaatg cggcagcgaa gcgagccgcg tcatcgaaaa gtgcgactgc acgaacgcca
     1921 cgggcccgat ggccgagctc tgcggtaaat agcagacgca gcgagacgcc gacacgcagc
     1981 gccatcaagg cgttgcctcc ggccgtgagc gagccgtggc gggtccttcg aaagcgaaac
     2041 ggcgccccga gcgagctcgg gcggcgccgt tttcgtgact tctcgcgact agaggctcac
     2101 tcgacgaaaa tatcgaccgt cggccgcagc ttgaggcacg ccgcgagcac ggtgtgcac
//
LOCUS       DATIML010000835         2656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5090262, whole genome shotgun sequence.
ACCESSION   DATIML010000835 DATIML010000000
VERSION     DATIML010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5090262"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..763)
                     /locus_tag="VLJ38_14470"
     CDS             complement(104..763)
                     /locus_tag="VLJ38_14470"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSU40780.1"
                     /translation="MSTRVALIRHGATTLSAEDRFAGATNVELSDAGRAQARALADRL
                     ASEPLAAIYASPLGRTLETASLVGAPHGLSPLPRDALREIDHGHWETLTRAEVESRYG
                     IEYAAWETDPFTFAPPGGESGVSVMARALPALREIVLAHTGGFVAVVSHKATIRLLLC
                     AVLGIDARGYRDRLDQAPACLNLLEFKDPVRARLMLFNDVSHYTATPRRPGARLSKWW
                     E"
     gene            complement(778..1677)
                     /gene="cyoE"
                     /locus_tag="VLJ38_14475"
     CDS             complement(778..1677)
                     /gene="cyoE"
                     /locus_tag="VLJ38_14475"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: protein motif:HMM:TIGR01473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HSU40781.1"
                     /translation="MNPPLAKTLESPSSASPLRLAGLLVELTKPSIVALVMVTATCGA
                     LVAHGSLPLGRLLVALVATTLVVGAANALNMYAERDTDALMRRTLQRPLPSGRLSAEV
                     ALGFGLLAASIGLNVLGVVAGGLACALTFLAFASYVFVYTPLKRVTPHALVVGALPGA
                     LPPLIGYAAVRGTLGWPALFLFAVLFVWQMPHFLAISLFLQEDYRRGGMRVYSVARGE
                     QATVRAARYWTLALVALTLLPAIGGAVHLGYFGVVVPAGLAFLALVFVKPAELTRVRW
                     ARRVFFASMPYLVVVYAAFVAAA"
     gene            1870..>2656
                     /locus_tag="VLJ38_14480"
     CDS             1870..>2656
                     /locus_tag="VLJ38_14480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40782.1"
                     /translation="MRFVGMLLGAAPLALAATLVTGTAAASDVGKTEASAKGKGITGG
                     ALLGAELVCSVEAVAGVKSPWAYVGGGVLGAAAGGVGGYFVEQNASPRASMLLLAGGL
                     TLVIPTIVGVLSATAYRPPANYLTDRPPADEPVANPPQPDLASPAPPGVTPAPAPATP
                     PTETNPATPPTMVPPTTPPTPSPPPTPSGPGSGAGPSSELPRVRHHLAARDRVLPPLV
                     LTTPSLVALTPGALALRIPAVEIQNTYTRAELAMYGVKQTTEVH"
BASE COUNT          451 a          933 c          919 g          353 t
ORIGIN      
        1 ccgaacccgc ggacgttacg tcgccgaacc cgcggacgtt acgtcgccga acccgcggac
       61 gttacgtcgc cgaacccgcg tagtcgcgcc gacgaagcgc gcgctactcc caccatttcg
      121 aaagccgcgc cccagggcgg cgcggcgtgg ccgtgtagtg cgagacgtcg ttgaacagca
      181 tgagccgcgc gcgcaccgga tccttgaact cgagcaggtt caagcacgcg ggcgcctgat
      241 cgagcctgtc gcgatagccg cgcgcatcga tgccgagcac ggcgcacagg agcaggcgaa
      301 tcgtcgcctt gtgcgagacg acggccacga agccgcccgt gtgcgcgagc acgatctcgc
      361 gcaaggcggg cagcgcgcgg gccatcacgc tcacgcccga ttcgccgccg ggcggcgcga
      421 aggtgaacgg gtccgtttcc cacgcggcgt actcgatccc gtagcgcgac tcgacttcgg
      481 cccgcgtgag cgtctcccag tgaccgtgat cgatttcgcg cagggcgtcg cgcggcagag
      541 ggctcaagcc gtgcggcgcg ccgacgagcg acgccgtctc gagcgtgcga ccgagcgggc
      601 tcgcgtaaat cgcggcgagc ggttcgctcg cgagccggtc ggcgagcgct cgtgcctgag
      661 cgcgtcccgc gtcggagagc tcgacgttcg tcgcaccggc gaagcgatct tcggccgaga
      721 gcgtcgtcgc gccgtgtcga atcaacgcga cgcgggtact catggcccgc tgaaccttca
      781 cgccgccgcg acgaaggcgg cgtacacgac gacgaggtag ggcatcgacg cgaagaacac
      841 gcgccgcgcc cagcgcacgc gcgtgagctc cgcgggtttc acgaaaacga gggcgagaaa
      901 ggcgagcccc gcgggcacca ccacgccgaa gtagccgagg tgcacggcgc cgccgattgc
      961 gggcaagagc gtgagcgcga cgagcgcgag cgtccagtag cgagcggctc gcaccgtcgc
     1021 ctgctcgccg cgcgcaaccg agtacacgcg catgccgccg cggcgatagt cttcctgcaa
     1081 aaacaaagaa atcgccaaga agtgcggcat ctgccacacg aagagcacgg cgaagagaaa
     1141 cagcgcgggc cagccgagcg ttccgcgcac ggccgcgtac ccgatgagcg gcgggagggc
     1201 gccgggcagc gcgcccacga cgagagcgtg cggcgtaaca cgcttgagcg gcgtgtagac
     1261 gaacacgtag cttgcaaaag cgaggaacgt gagcgcacag gcgagaccgc cggcgaccac
     1321 gccgagcacg ttgagcccga tgctcgccgc gagcagaccg aaaccgagcg cgacctcggc
     1381 gctcagccgg cccgacggca acggacgctg gagtgtgcgt cgcatgaggg cgtcggtgtc
     1441 gcgctcggcg tacatattga gggcgttggc cgcgccgacg acgagcgtcg tcgcgacgag
     1501 cgcgacgagc agccgaccga gcggcaaaga gccgtgcgcc acgagcgcac cgcacgtggc
     1561 cgtcaccatg acgagcgcca cgatgctcgg tttcgtgagc tcgacgagca gacccgcgag
     1621 acgcagggga cttgcgctgg acggcgactc gagggttttc gcgagcgggg gattcacgtc
     1681 ggctccgcgc ccgctttagc actcttgtcg cggcctcggc tccgagcgtg cgctttttta
     1741 cgtgattacg cccattttcg gccgatcgac cgggagtgtc ggagtgccac actcgaaatt
     1801 tcgcgtgttg ggcgcgtatt cgagagcgtt ctcggtgtta tcctcacgcc cgggtaacgg
     1861 agaaaaccaa tgcgcttcgt agggatgctt cttggggccg cgccactcgc gcttgcagcg
     1921 acactcgtca cggggaccgc agcggcgtcc gatgtgggca aaacggaagc gtccgctaag
     1981 ggcaagggga tcacgggcgg cgccctgctc ggcgccgagc tcgtttgcag cgtcgaggcc
     2041 gtggccggcg tgaagtcgcc atgggcctat gtgggcggcg gcgtgctggg cgcggccgcc
     2101 ggcggcgtcg gcggctactt cgtcgaacaa aacgcgagcc cacgcgcgtc gatgttgctg
     2161 ctcgcgggtg gcttgacgct cgtcattccc accatcgtcg gcgtgctcag cgcgaccgcg
     2221 tatcgtccgc ccgcgaacta cctgaccgat cgtccgcccg cggacgagcc cgtcgcgaac
     2281 ccgccgcaac cggacctcgc gagcccggct ccgcctggcg tgacgcccgc accggcaccc
     2341 gcgacgccgc cgacggaaac gaatccggca acgccgccga cgatggtgcc cccgacgacg
     2401 ccgcccacgc cgtcgccgcc gccgactccg tccggacccg gcagcggcgc cggtccaagc
     2461 tccgagctcc cgcgcgtgcg tcaccacctc gccgctcgtg atcgcgtgtt gccgccgctc
     2521 gtgctcacga cgccctcgct cgtcgcgctc acgcccggcg cgctcgcgct ccgcattccg
     2581 gccgtcgaga ttcagaacac ctacacccgc gccgaattgg cgatgtacgg ggtcaagcag
     2641 actacagagg tacaca
//
LOCUS       DATIML010000836         2198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4507651, whole genome shotgun sequence.
ACCESSION   DATIML010000836 DATIML010000000
VERSION     DATIML010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4507651"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..627
                     /locus_tag="VLJ38_14485"
     CDS             169..627
                     /locus_tag="VLJ38_14485"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSU40783.1"
                     /translation="MFRSILVPVDYSEHSKASVRYAAELAKNVGATLHVVHVWDRPTY
                     ASDAVLVRRPGEEHCSLAELIQRNAENDMKDFLATLELGDVKLTHELLSGDPTAKLVE
                     QLKGGGYDLVVLGTHGRTGLMHLLMGSVAEKLVRLSPVPVLTVPPASRGR"
     gene            772..1314
                     /locus_tag="VLJ38_14490"
     CDS             772..1314
                     /locus_tag="VLJ38_14490"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HSU40784.1"
                     /translation="MRVRFGETDLMGIVHHGTYISYFEVGRVEYMRRRGLDYHSWTEL
                     GIHLPVVEAYVRYRRTARFDELLCIETRLSELSRVKVRFDYRLLRAVEGEIAANGTDG
                     SEELVAEGHTLLACVDQHHIPRRIPPEAEAVLLGPELDIPARIGVDGRPRPTPLAPSH
                     AEGANGALPSPSERVAGSKS"
     gene            1384..>2198
                     /locus_tag="VLJ38_14495"
     CDS             1384..>2198
                     /locus_tag="VLJ38_14495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40785.1"
                     /translation="MSERRPASPDPRASVVDSGWSEPAPSERQLPRYDEGGREQLVTR
                     VDDQIQARIAAMNYDDRTEVTSAPATSPPPPPPPLPPPPPLPVHQTARALPPVPELKP
                     VPLDERTVVDSQPPVSSLPPLNPPARPASLPPPSLPPPQRASFSPSFSPMHPGSFEFE
                     GPPRLGRALADRVRIGGAVLPLWGILFPAFGVTAIVAALLAGYFGPGSQIEHAAIPAA
                     ATTDPAALARAPSSSASPLGTPDPSSASNSGSVLERARSGDARAISVLEHQRP"
BASE COUNT          315 a          777 c          725 g          381 t
ORIGIN      
        1 gcggcgcgct ggctgccggt gtccctgaat tttctactgc agaacgtggg cggcgtcgcg
       61 agctgtctcg ccggcatggc gctcgggcgg ctcgagtagg aagcgtgcgc gccctcgtgg
      121 tggggtgata gagttcgagc ctgcgccgcg tggcgcggag gttctacgat gtttcgctcc
      181 atcctcgtgc ccgtcgacta ttccgagcac tccaaagcaa gcgtgcgtta cgccgccgag
      241 cttgccaaaa atgtcggcgc gactttgcac gtcgtgcacg tttgggatcg gccgacgtac
      301 gcgtcggatg cggtgctcgt gcggcgaccg ggtgaagaac attgctcgct cgccgagctg
      361 atccagcgca acgcggagaa cgacatgaag gattttttgg ctacgctcga gctcggcgac
      421 gtgaaactca cgcacgagct gctgtcgggc gatcccacgg cgaagctcgt cgagcagctg
      481 aaaggaggcg ggtacgacct cgtcgtgctc ggaactcacg gtcgaacggg cctcatgcac
      541 ttgctcatgg gctccgtcgc cgaaaagctc gtgcggcttt cgcccgttcc ggtgctcacg
      601 gtccccccag cctcccgcgg gcggtgactc gagcggagcg gggcagtggg cggaggacgg
      661 ccggtccttc gcggctcaaa tcaggggctt gctcgcgagc cggagagccg cttattctcg
      721 cgcctcctcg tgaagcaagc cgttcctgcg cactgcacgt ccaggtaccg agtgcgcgtc
      781 cgcttcggcg agactgacct gatggggatt gtccatcatg gcacctacat cagctacttc
      841 gaggtcgggc gtgtcgagta catgcgccgg cggggcctcg actatcattc ttggaccgag
      901 ctcggtattc acctgccggt ggtcgaggcg tacgtgcgct accgccgtac ggcccgtttc
      961 gacgagctcc tctgtatcga gacccgtctg agcgagctgt cgcgcgtcaa ggtgcgattc
     1021 gactatcgct tgctgcgcgc ggtcgagggt gagatcgccg ccaacgggac cgacggcagc
     1081 gaagagctcg tcgccgaagg ccacacgctg ctcgcctgtg tcgatcagca ccacatcccg
     1141 cgccgcatcc cgcccgaagc cgaggcggta ctgctcggtc ccgagctcga tattcccgcg
     1201 cgcatcggcg tcgatggtcg gccgcgtccc acgcccctcg cgccgagcca cgccgagggc
     1261 gccaacgggg cgctcccgtc gccgagcgaa cgcgtcgccg gttcgaaatc ctaagccccc
     1321 tgcgagaatc gttcgacggc agcggacgcc gctctcgcgc gtccggcgtg ttacgctgag
     1381 actatgtccg aacgccggcc cgcctccccc gatccccgcg cgtcggtggt cgattcgggc
     1441 tggtcggaac cggcgcctag cgagcgccaa ttgccgcgtt acgacgaggg tggacgcgag
     1501 cagctcgtca cgcgcgtgga cgatcagatc caagcgcgca tcgccgcgat gaactacgac
     1561 gatcgcacgg aggtgacctc ggcacccgcg acgtcgccgc cgccacctcc tccgccactc
     1621 ccgcctccac ctccgttgcc ggtgcatcaa acggcgcgag cgttgccgcc cgtccccgag
     1681 ctcaagcccg tgccgctgga cgagcggacc gtggtggatt ctcagccgcc ggtttcgtca
     1741 ctgccgccct tgaacccacc ggcgcgtccg gcgtcgctgc caccgccgtc gctgccgccc
     1801 ccgcagcgcg cgtccttttc tccgtcgttt tctccgatgc acccgggcag cttcgagttc
     1861 gagggaccgc cgcggctcgg ccgcgcgctg gcggatcgcg tgcgcatcgg cggcgccgtg
     1921 ctgccgctct gggggatctt gtttccggcg ttcggggtga cggcgatcgt ggcggcgttg
     1981 ctcgcgggct acttcggccc tggcagtcaa atcgagcacg cagcgatacc ggccgctgcg
     2041 acgaccgatc cggcagcgct cgctagagct ccctcgtcct cggccagccc gctcggcacg
     2101 cccgacccga gctccgcttc caattccggt tccgtgctcg agcgcgcgcg cagcggcgac
     2161 gcacgcgcga tcagcgtgct cgagcaccaa cgacccga
//
LOCUS       DATIML010000837         2179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2774975, whole genome shotgun sequence.
ACCESSION   DATIML010000837 DATIML010000000
VERSION     DATIML010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2774975"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1211)
                     /locus_tag="VLJ38_14500"
     CDS             complement(<1..1211)
                     /locus_tag="VLJ38_14500"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSU40786.1"
                     /translation="MAPRAVCRSLGLAAAVLCAVTSTARAAIDLGAVARSGIALPRVV
                     GAQPSMIVEVPPGADPPARFVRVGTTPSGSTLGVLDLGVASLTSLAAARPELTLSWSP
                     PLRLLLDHADGFTGASAFRNATGLTGRGVILGMIDTGLDPTHPDLRDASGKSRILWWL
                     DFSRERAGLHPELEDELGCRIDPNDSNGVPCAVLDGDDVETLLADNDSTNDPRDFGGH
                     GTHVASLAGGTGRSNSPPRYVGVAPEASYIVARVARKGGGIYDTDVLKAASFVFERAQ
                     DLARPAVVNLSLGSDFGGHDGSSPVERGLESLVGADHPGRAIVVAAGNSATLYAGLDT
                     GTPEPLGVHTEVHIPEHGEALVPIVTPATAPGVTEGTIYVWITLRAGDALKLGVEHRA
                     GTILQPVAPGAG"
     gene            complement(1253..>2179)
                     /locus_tag="VLJ38_14505"
     CDS             complement(1253..>2179)
                     /locus_tag="VLJ38_14505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HSU40787.1"
                     /translation="TLEEMGGAKMHTSVSGCGDVLVATEEQALTFGRDYLAYMPQNAE
                     AEPPSTWVRPPKPGAPLESVVLPDENKPFDMRAVIEAVIDDNSLLEVKARFAKEIITA
                     FARIEGRPVGIVANQPKHLGGVLFVDSADKAARFIWLCDAFNLPLVFLADVPGFMIGT
                     KVERQGIIRAGAKMVAAVSEATVPKLSVIVRKAYGAGLYAMCGPAFEPEACIALPTAS
                     IAVMGAQAAVNAVHYNRIQQVPEGPEREALVAKLRAEYREDVSLEKLASELVIDAVVP
                     FDRLRSEIVARLANASSRRPARIARKHLVPPM"
BASE COUNT          334 a          760 c          751 g          334 t
ORIGIN      
        1 ccagctcccg gcgcgacggg ctgcaggatc gtaccagcgc gatgctcgac gcccagcttg
       61 agtgcgtccc cggcacgcag cgtgatccaa acgtagatcg tgccctccgt aacgcccggc
      121 gccgtcgccg gcgtcacgat cggcacgagc gcttcgccgt gctcgggaat gtgcacttcg
      181 gtgtgcacgc cgagcggctc cggcgtcccg gtgtcgaggc ctgcgtacag agtcgcgctg
      241 ttgcccgcgg cgaccacgat ggcgcgaccg ggatgatccg caccgaccaa gctttcgaga
      301 ccgcgctcga cgggcgagct gccgtcgtga ccgccgaaat cgctgccgag gctcagattc
      361 accacggccg ggcgcgcgag atcttgcgcg cgttcgaaca cgaagcttgc ggctttgagc
      421 acgtcggtgt cgtaaatgcc gccgccttta cgggcaacgc gcgccacgat gtagctcgcc
      481 tccggcgcga caccgacgta acgcggcggc gagttcgagc ggcccgtgcc gccggcgagc
      541 gacgcgacgt gcgtgccgtg tccaccgaag tcgcgcggat cgttcgtgga gtcgttatcg
      601 gcgagcagcg tctcgacgtc gtcgccgtcg agcacggcgc agggcacgcc attgctgtcg
      661 ttcggatcga tgcggcagcc gagctcgtct tcgagctcgg ggtggagacc ggcgcgttcg
      721 cgcgaaaaat cgagccacca gaggatacgg ctcttgccgc tggcgtcccg gaggtcgggg
      781 tgcgtcggat ccaggcccgt atcgatcatg ccgaggatga cgccgcgccc ggtgagaccg
      841 gtcgcgttgc gaaacgcgga cgcgcccgtg aaaccgtcgg cgtgatcgag caggagcctc
      901 agcggcggtg accaactgag cgtgagctcg ggccgcgcgg cggcgagcga agtgaggctc
      961 gccacgccga ggtcgagcac gccgagcgtc gaaccggacg gcgtcgtgcc gactcgcacg
     1021 aagcgtgcgg gtgggtccgc cccgggcggc acctcgacga tcatgctcgg ctgcgccccc
     1081 acgacgcgcg gcaacgcgat cccgctacgc gcgaccgcgc cgagatcgat cgcggcgcgc
     1141 gccgtgctcg tgacggcgca gagcacggcg gcggcgagac cgagcgaacg gcagacagcc
     1201 cgcggcgcca tgccgtcgcg cgagcgcaga agagcggcgc gtccggccat cgtcacatcg
     1261 gcggcacgag gtgtttgcgt gcaatacgag ccggacggcg cgagctcgcg ttggcgagcc
     1321 gcgccacgat ctcgcttcgt agccgatcga acggcaccac ggcgtcaatc acgagctcgc
     1381 tcgcgagctt ttcgagactc acgtcttcgc ggtactcggc gcggagcttc gcgacgagcg
     1441 cttcccgctc cggcccttcc ggtacctgct gaatgcggtt gtagtggacg gcattgacgg
     1501 ccgcctgcgc gcccatgacc gcaatcgacg cggtcggcag cgcgatgcac gcctcgggct
     1561 cgaacgccgg cccgcacatg gcgtagaggc ctgcgccgta cgccttgcgc acgatcacgc
     1621 tgagcttggg caccgtcgct tcgctcaccg ccgccaccat cttggcccca gcgcgaatga
     1681 tgccctggcg ctcgaccttg gtcccgatca tgaagcccgg cacgtcggcg agaaagacca
     1741 gcgggaggtt gaaggcgtcg cacagccaaa tgaagcgcgc cgccttgtcc gcgctgtcga
     1801 cgaacagcac gccgcccagg tgcttcggct ggttggcgac gattccgacc ggccgccctt
     1861 cgatacgtgc gaaggcagtg atgatctcct tggcgaagcg cgccttcacc tccagcaggc
     1921 tattgtcgtc gatgacggcc tcgatcaccg cccgcatgtc gaacggcttg ttctcgtcgg
     1981 gcaggaccac gctctcgagc ggcgcgccgg gtttcggcgg gcgcacccac gtgctcggcg
     2041 gctccgcttc ggcattttgc ggcatgtacg cgaggtagtc gcgtccgaac gtgagcgcct
     2101 gctcctccgt cgcgacgagc acgtcgccac aaccggagac gctcgtgtgc atcttggcgc
     2161 cgcccatttc ctcgagcgt
//
LOCUS       DATIML010000838         5571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4507659, whole genome shotgun sequence.
ACCESSION   DATIML010000838 DATIML010000000
VERSION     DATIML010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5571
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4507659"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="VLJ38_14510"
     CDS             complement(<1..482)
                     /locus_tag="VLJ38_14510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HSU40788.1"
                     /translation="MDYAEHLDRGLHDVHCSFIPGAPPTGEAEACRAAMYSPYSALFR
                     ESMWGGIPISLFALGAFAFLGGFAVYLLLARERAPKMALVFFAGVGVTPLLVSLVMFT
                     ISVTKLGHLCKTCVGIYISSLLLAIGAVSGLFTLKGEARPRLGFLFPVAWLAALGLTT
                     L"
     gene            complement(646..1665)
                     /locus_tag="VLJ38_14515"
     CDS             complement(646..1665)
                     /locus_tag="VLJ38_14515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40789.1"
                     /translation="MPVVVPTSSDMAPHVGELVTLGAKAASVAATGTCVARTSDFTYS
                     WLLTSVPAGSHASLNATTVNAPSFVVDAAGTYVARVVALDAAGHAGEPAEVRIEAGNC
                     GANSPVVGLLSSAPATPVTGDTVTLGASVTDADADATCDAHAASFEYTWSFSDLPTGS
                     HSALNDAHVEHPSFVVDTAGSYALDLVVTDPTGRRGTASVSVDVSQASTSGTDDGGGS
                     PSCGFSAPVAAAWKVVPGSVVDCSVPLIPTDLEGKSEIMLDAVPSSDADTLCGENQSL
                     DYQWTLLATPIDGASSHLLSTSSRTTVLAVTSEGEYQLRLVVTDSTGRASPELVCSLY
                     AYGLK"
     gene            1864..2904
                     /locus_tag="VLJ38_14520"
     CDS             1864..2904
                     /locus_tag="VLJ38_14520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40790.1"
                     /translation="MPRGLAPLRLSRALCLWLAGLAWTPRAAALETPSAAPERVRLVY
                     ARGADCPTPAALERELDTRLGTGWQAQPDELARTIAVSEELAREDHAVRIEYSDGSGR
                     AVTRAINARTCEEAAAMTAVVVAVAIDALAHERETAQSAPALHESVVAPAVPPAPAPV
                     PSAPALTPKPHATPFVHEAGLRFSVTTGFGTGAAWGAGAEWGLVARSFAVRAALEART
                     TGSVPAADAHARFSAFTGRGDVCAPTLRPPGWLSGRLCAGLEVGALKAEGVLSPPAVT
                     AAQPSTVPWIAGLVTPRLRLATKHVFVELVSELRFPFTRHTFTLEAPERRVFAIPAVA
                     FGVSLGAGVRFN"
     gene            3004..3531
                     /locus_tag="VLJ38_14525"
     CDS             3004..3531
                     /locus_tag="VLJ38_14525"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU40791.1"
                     /translation="MSGERASDFARAYVAFAWRVARRLGLGPADAEDVAQRAMLVAAR
                     RVETVTAGSERAFVFRTVENLVSRVYRARRRKPEEPEEAAGELVDHDHDPERLLEQRR
                     AREALDSILQTLSPDLRAAFVLFEIEGLSQPEMAVALGIPTGTVASRLRRAREEFLRI
                     AARRGLVAHSTKRLR"
     gene            3528..4382
                     /locus_tag="VLJ38_14530"
     CDS             3528..4382
                     /locus_tag="VLJ38_14530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40792.1"
                     /translation="MTELKRWLDDAPSDDIHALLAAAREENAPPRLLRRTLVALGTTS
                     ATVAAGASGASAASGAAKLGMLGIVLKWGGAGLVCGTLVAGAVAGVSRVATTHDTSRS
                     RAFERPASPQTNPTPELPRTNPARTAHTATAPDAAPAPPSGPSQPDVAALPRTSAPAM
                     PLPPATPSTAAVTLRSASSVRVPPPADPGPATAREVALVDAARTALRRGDGNTASSLL
                     RDYEQRFVPAHLEPEVLYLRMQAAKTQGDREAARNAAARIVSQFPQSPEVGRAEELLN
                     ADSSADKK"
     gene            4427..5524
                     /locus_tag="VLJ38_14535"
     CDS             4427..5524
                     /locus_tag="VLJ38_14535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40793.1"
                     /translation="MKLASWFSLALALACSGTSSIGRGTLDGGGGQGSSEQPDSGTPF
                     VTAGTPSTDGSGGVTSEPPGAAECVSTIEASEANDYELVPTFGFELTHVAPNMDLTFD
                     WSGVTQDFMGKPLDPKADIAHVELSLVTHKNTADVLARDFMTLSTKTADLLELDTLGS
                     RTRAGTQKFTVQMPPPIQDYVLSDFDSVTFGGYPYLVSIASTSAAGNQIRMFAPFVLD
                     DASMNTYVFMTSQSTTLAWASSLTTLTPVHVRPQDPHEMLDLSHLTSDVYGRPFPQTL
                     REVRISEHSAALEDLAGEVMDLDAVADHVWRAPAGTETSIDLSTLTDDDGQPFRGIDP
                     AGHTWLLALYADDVIPAPVFLTALEPCTAGQ"
BASE COUNT          904 a         2014 c         1858 g          795 t
ORIGIN      
        1 agcgtggtca agccgagcgc cgcgagccac gcgaccggaa acaagaaccc gagccgcggc
       61 cgcgcttcac ccttgagcgt gaagagcccg ctcacggcgc cgatcgcgag cagcagcgac
      121 gagatgtaga tgccgacgca cgtcttgcac aggtgcccga gcttcgtgac gctgatcgtg
      181 aacatcacga gcgacacgag caggggcgtg acgcccacgc ccgcgaaaaa gacgagcgcc
      241 attttgggag ctcgctcgcg cgcgagcagg aggtacacgg cgaagccgcc gagaaacgcg
      301 aacgcgccga gcgcgaacaa cgaaatcggg atgccgcccc acatcgattc tcggaacagc
      361 gcggagtagg ggctgtacat cgcggcgcgg cacgcctcgg cctcgccggt cggaggcgcg
      421 cccggaatga agctgcagtg gacgtcgtgc agcccgcgat cgagatgctc ggcgtagtcc
      481 atcgtcgagt acgacgcgaa cagaagcccg agaagtgacc ctccccgcgc gagagtcgcc
      541 ggaaatcgtg agctcgaacc gggcattcgc gggagagctt tccaaccggc agcaccgcgg
      601 tcaagcgtga aaccgctccc gtatgcgaag cagcggcgcc caggcctact tcagaccgta
      661 agcgtagagc gagcagacga gctcggggct cgcgcggccg gtcgaatcgg tcacgacgag
      721 ccgcagctga tattcgcctt cactcgtgac cgcgagcacg gtcgtgcggc tgctggtcga
      781 gagcaagtgc gaggaggcgc cgtcgatcgg cgtcgcgagc agcgtccact ggtagtcgag
      841 gctttggttt tcgccgcaaa gggtatcggc gtcgctcgaa ggcaccgcgt cgagcatgat
      901 ctcgctcttg ccctcgagat cggtcgggat cagcgggacc gagcagtcga cgaccgagcc
      961 gggcacgact ttccaagccg ccgcgaccgg cgcggaaaag ccgcagctcg ggctcccgcc
     1021 gccgtcatcg gtgccgctcg tgctcgcttg actcacgtcg acgctgacgc tcgccgtgcc
     1081 tcggcggccg gtcggatccg tcacgacgag gtcgagggcg tagctgcccg ccgtatcgac
     1141 gacgaacgac ggatgctcga cgtgcgcgtc gttcagcgcg ctgtggctgc ccgtcggcag
     1201 gtccgagaag gaccaagtat attcgaagct tgcggcatgc gcgtcacacg ttgcgtccgc
     1261 gtcggcatcg gtaacgctcg cgccgagcgt caccgtgtcg cccgtgacgg gcgtcgcggg
     1321 cgcggagctc aacaagccca cgacgggcga gttcgcgcca caattgccgg cttcgatgcg
     1381 gacctcggcg ggctcgcccg cgtgccccgc agcgtcgagg gcgacgacgc gcgcgacgta
     1441 agtgcccgcg gcatcgacca cgaagctcgg ggcgttgacg gtcgtcgcgt tcaagctcgc
     1501 gtgactaccg gcggggacgc tcgtgagcag ccaggagtag gtgaagtcgg aggtgcgcgc
     1561 cacgcaagtc cccgtggcag cgacgctcgc agctttggcg ccgagcgtca cgagctctcc
     1621 cacgtgcggc gccatatcgg agctcgtcgg cacgacgacg ggcacggact cgtggcaccc
     1681 tccagtcgca ggcgtggagg acgactcggc gcaggcgctc gtggccgcta gcaatgcgag
     1741 ggcgagtgac agcgaagatc gcatcggctc tcaccccgtt acggcacgcg ctttgcgcga
     1801 gtttagtggc cgaacgcccg gcgtgcgcgc gaactcagcc gcaatctcgt acacttgcac
     1861 gccgtgccac gaggcctcgc tccgctccgc ctgagccgcg ccctgtgcct ctggctcgcc
     1921 gggctcgctt ggacgccccg agccgcagcg cttgaaacgc cctccgccgc gcccgaacgc
     1981 gtgcgcctcg tgtacgcgcg cggcgccgat tgtccgactc cggccgccct cgagcgggag
     2041 ctcgacactc gactcggcac cggctggcaa gcgcaacccg acgaactcgc gcgcacgatc
     2101 gccgtcagcg aagagctcgc gcgcgaagac cacgccgtgc gcatcgaata cagcgacggc
     2161 tccggacgcg ccgtgacgcg cgcgatcaac gcgcgcacgt gcgaagaagc cgctgcgatg
     2221 acggccgtgg tcgtcgccgt ggcgatcgac gcgctcgctc acgagcgcga gactgcgcaa
     2281 tcagcgcccg cgctgcacga atcagtggtc gctcctgcgg tcccgcccgc accagcgccc
     2341 gtcccgtcag cgccggcgct cactccgaaa ccgcacgcca cgccgttcgt tcacgaagct
     2401 ggcctgcgct tcagcgtgac cacgggcttc ggcacgggcg cggcatgggg cgccggcgcc
     2461 gaatgggggc tcgtcgcgcg gagcttcgcc gtgcgcgcgg cgctcgaggc tcgcacgacg
     2521 ggcagcgtcc cagcggccga tgcgcacgcc cgtttcagcg ccttcacagg gcgcggcgac
     2581 gtttgcgccc caacgctgcg gccaccagga tggttgagcg gccggctgtg cgccggactg
     2641 gaagtgggtg cgctgaaggc cgaaggcgtg ctctcaccgc cggccgtgac ggcggcgcag
     2701 ccaagcacgg tgccgtggat tgccggactc gtaacgcctc ggttgcgact ggcgaccaag
     2761 cacgtcttcg tcgagctcgt ctcggaactg cggttcccct tcactcgcca taccttcacg
     2821 ttggaggccc cggaacgccg cgttttcgcc atcccggcgg ttgccttcgg cgtcagcctg
     2881 ggggccggcg tgcgatttaa ctgatcggag cggctgctgc cggggatcag ccttgaaacg
     2941 ctggtgcgct cgagtgctct cgcccaaccc ccgccggtcc tcgatgcggc cccgcatacg
     3001 tcgatgagcg gggaacgcgc gagcgatttc gcgcgcgcct acgtggcctt cgcgtggcgc
     3061 gtcgcgcggc gcctcgggct tgggcccgcc gatgccgagg acgtagcgca acgggccatg
     3121 ttggtggccg cccgccgcgt cgagacggtc acggccggca gcgagcgcgc cttcgtgttt
     3181 cgcaccgtcg aaaacctcgt cagccgggtc tatcgcgcgc gccgacgcaa gcccgaggaa
     3241 cccgaggaag cggcgggtga gctcgtcgac catgaccacg acccggagcg gctgctcgag
     3301 cagcgacgcg cgcgcgaagc gctcgactcg atcttgcaaa cgctgtcgcc ggatttacgc
     3361 gccgccttcg tgctgttcga aatcgagggc ttgagccaac ccgaaatggc agtcgcgctc
     3421 gggatcccga cgggcacggt ggcgtcacgc ttgcggcgcg cgcgcgagga gttcttgcgt
     3481 atcgccgcgc ggcgcgggct ggtcgcccat tcgaccaaga ggctacgatg acggagctca
     3541 agcgctggct cgacgacgcg ccttcggacg acattcacgc tttgctcgcg gcggcgcgcg
     3601 aagaaaacgc gccaccgcgc ctgctacggc ggacgctcgt tgcgctcggc acgacttcgg
     3661 cgaccgtggc agcgggcgcg agcggcgcgt ccgcggcgtc cggcgcagcg aagctcggca
     3721 tgctcggcat cgtgctcaag tggggcggcg ccgggctcgt gtgcggcacg ttggtcgccg
     3781 gagcggtcgc gggcgtctcg cgtgtcgcga cgacgcacga tacctcgcgc tcgcgcgcgt
     3841 tcgagcgacc ggcgtcgccg cagacgaacc cgactcccga gctgccgaga acgaacccgg
     3901 cgcgcacggc gcacaccgca acggcgccgg acgccgcacc cgccccgccg agcggccctt
     3961 cgcaacccga cgtcgcggcc ctgccccgga ctagcgcacc cgccatgccc ctcccgcccg
     4021 cgacaccgag cacggctgcc gtgacgctgc gctcggcgtc gtccgtccgc gtccccccac
     4081 ccgccgaccc cggccccgcc acggcgcgtg aagtcgcgct ggtcgacgcc gcgcgcaccg
     4141 cactccgccg cggcgacggc aacaccgcgt cgagcctcct ccgcgactac gaacagcgct
     4201 tcgtccccgc gcacctcgag cccgaagtgc tctacctccg catgcaagcc gccaagaccc
     4261 agggcgaccg agaggccgcg cggaacgctg ccgctcggat cgtctcgcag ttcccgcaat
     4321 ctcccgaagt cggccgcgcc gaggagctct tgaacgcgga cagcagcgcc gacaaaaagt
     4381 gatcggcgcg ttacggcgcg gggatgagca aggtggtgag gaaacaatga agcttgcaag
     4441 ctggttcagc ctcgcgctcg cgctcgcgtg cagcggcacg agcagcatcg gtcgcggcac
     4501 actcgacggc ggcggcggcc agggctcgag cgagcaaccg gactccggaa ctccgttcgt
     4561 cacggccggc acgccgagca cggacggtag cggcggcgtc acgagcgagc cccccggcgc
     4621 ggccgaatgt gtctccacga tcgaagccag cgaggccaac gactacgagc tcgtcccgac
     4681 cttcggcttc gagctcactc acgtcgcccc gaacatggat ctcaccttcg actggagcgg
     4741 cgtcacccag gatttcatgg gcaagccgct cgacccgaag gcggacatcg cgcatgtcga
     4801 gctctcactc gtgacgcaca aaaatacagc cgacgtcctc gcccgagact tcatgacgct
     4861 cagcacgaag acggccgact tgctcgagct cgacacgctg ggctcgcgca cacgcgccgg
     4921 cacgcagaag ttcactgttc agatgccgcc gcctatccag gactacgttc tctccgactt
     4981 cgacagcgtc actttcggag gctacccgta cctggtctcg atcgcctcga cctcggcggc
     5041 gggcaaccag atccgcatgt tcgcgccctt cgtcctcgac gacgcttcga tgaacacgta
     5101 cgtcttcatg acctcgcagt cgacgacgct cgcgtgggcg tcgagcctca cgacgctcac
     5161 ccccgtgcac gttcgccccc aagacccgca cgagatgctc gacctcagcc acctcacgag
     5221 cgacgtctac ggccgtccct tcccccaaac gttgcgcgaa gtgcgcatca gcgagcattc
     5281 cgcagcgctc gaggatctgg ccggcgaggt gatggacctc gacgccgtcg ccgaccacgt
     5341 ttggcgcgct ccggccggca ccgaaacctc catcgacctc tcgacgctca ccgacgacga
     5401 cggccaaccg tttcgaggca tcgaccccgc gggccacact tggctcctcg ccctctacgc
     5461 ggacgacgtg atcccagcgc ccgttttcct gaccgcgctc gagccgtgca ccgccgggca
     5521 gtgacgtagg ctttcggtcc ttttttggtt taggggcgac cgctggtgca c
//
LOCUS       DATIML010000839         5094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3643417, whole genome shotgun sequence.
ACCESSION   DATIML010000839 DATIML010000000
VERSION     DATIML010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5094
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3643417"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..958)
                     /gene="map"
                     /locus_tag="VLJ38_14540"
     CDS             complement(122..958)
                     /gene="map"
                     /locus_tag="VLJ38_14540"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HSU40794.1"
                     /translation="MALDLHFRSSSVEIKSAREIDAMREVGRLAGDSLMKIAELIRAG
                     VTTNELNQFVHEDTLKKGARPAPLNYRNGDSPPFPKSICTSVNEVVCHGIPSARALRD
                     GDIVNVDITHIYRGFHGDTSATFYVGKPSEEAKLVTEVARRSLELGIAEVRPGARLGD
                     IGAAIQEFAEARGCSVVEDFVGHGIGRKFHDEPKVAHYGERGKGMRLKAGMTFTIEPM
                     INLGTHEVEILDDEWTAVTADGRLSAQFEHTVLVTATGVEVLTARAGRLANSEIFPDY
                     FG"
     gene            complement(978..1544)
                     /locus_tag="VLJ38_14545"
     CDS             complement(978..1544)
                     /locus_tag="VLJ38_14545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40795.1"
                     /translation="MTRFTFWRRPAAVVLLVLGPNGCSGTQKHAADADAAPAPYSPEA
                     AVLFDDVFAPAVFGFDPEGRHPGKDPKLKERTRQAEFVLVARVETVSRVGGVAHRGAY
                     EVALAPVGAPLVGQAPPGPVVLKVPATSPSYAWLDGAGAKWVGSRLVVFGRHYRDGAG
                     KVLHFRCEPDTAEVRNAVEHDAGLRVLR"
     gene            1729..2580
                     /locus_tag="VLJ38_14550"
     CDS             1729..2580
                     /locus_tag="VLJ38_14550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40796.1"
                     /translation="MRLMSWTVVAVPLFAVSALVAVPAAAEKSGAEKPAKGGPGSVGK
                     KIALAPEGLKFGMSLEAIAKLYDKSFDQEYLPLYKKAAPGPETEALDAEIKQRKAEVR
                     RSKVDFNNTPTGVDQTALKGEYSYANGESMARLTLHSGTERYFFFFNDRLWKVYDEHK
                     LKKGSPLGDNYADAVKVLTSKYGSPPKKAPANADKGQFFDESVWTTPDMVIRAVDRDS
                     TLAMVYADREVQEDLPKKRRNHPKDETAMDPDVASALKKNEPPPGPKDKGGASDKKGG
                     GKGAPKK"
     gene            complement(2683..2946)
                     /locus_tag="VLJ38_14555"
     CDS             complement(2683..2946)
                     /locus_tag="VLJ38_14555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HSU40797.1"
                     /translation="MGAPRDQILEIVREIVGPLVRADGGQVYLVAVGDRSLTLHLAGR
                     FSGCPGNTLARRRVLEPLLTARFPDLKIEITSGPLLPAGAELL"
     gene            3091..3339
                     /gene="rpsP"
                     /locus_tag="VLJ38_14560"
     CDS             3091..3339
                     /gene="rpsP"
                     /locus_tag="VLJ38_14560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HSU40798.1"
                     /translation="MVQIRLARHGTKKTPFYRIVVAEHRRPRDGRFIENIGTFDPAGA
                     LAIDMARFEHWKKHGAQASHTLDRLLKKQARAAAAAST"
     gene            3345..3581
                     /locus_tag="VLJ38_14565"
     CDS             3345..3581
                     /locus_tag="VLJ38_14565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HSU40799.1"
                     /translation="MALKALVSTIARALVDDPDAVEVTEVDGDRNAVLELRVGEGDIG
                     KVIGKDGRTAQSIRTILLAASTKIGRRVHLDILD"
     gene            3595..4107
                     /gene="rimM"
                     /locus_tag="VLJ38_14570"
     CDS             3595..4107
                     /gene="rimM"
                     /locus_tag="VLJ38_14570"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HSU40800.1"
                     /translation="MARASRLEIGKIGAPHGLRGDVHATLHFEGSQALAAGVRVGVVG
                     ASGARELVLRSAQAHGRGMLLGFEGIDDRDAAVALRGARLELDRSALPPLADGEYYLV
                     DLIGATAFGPDGPVGEVTGISAHPSVTTLELRLTDGRVAEQPLTAPWVKRVDVDAGRV
                     ELENLDGLVI"
     gene            4130..4834
                     /gene="trmD"
                     /locus_tag="VLJ38_14575"
     CDS             4130..4834
                     /gene="trmD"
                     /locus_tag="VLJ38_14575"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HSU40801.1"
                     /translation="MHVAIVTLFPELFEPFLRTSFVGRAVERGVLAVTLEDLRPHGLG
                     NHLSVDDTPYGGGSGMVMRPDCVVSAMDAAERKVAARGRPKRILLTPQGRRFDQARAR
                     ALSELSAFTLVCGRYEGFDERVRYFADDEISLGDFVLTGGEVAAMCVIESAVRLLPNV
                     LGNEQSLREESFSPECGGLLEYPHFTRPVSFRGYEVPEVLRSGDHEKIATWRRGQARA
                     RSRARRPDLARRGGGK"
     gene            4831..>5094
                     /locus_tag="VLJ38_14580"
     CDS             4831..>5094
                     /locus_tag="VLJ38_14580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HSU40802.1"
                     /translation="MRRLAAALVHHPVLDRQGAIVTTAITNLDLHDIARSAHTYGLTD
                     FFVVHPVGAQRELAERVREHWTSGSGARRIPDRTPAMLGLRIVV"
BASE COUNT          882 a         1668 c         1748 g          796 t
ORIGIN      
        1 attcgggccc tagagcgacg aatccgtgcg caagctagtc gcctcagacg cgatacgtca
       61 aggcaaagca gcaccggcgc cccgcagcgt caggccggct agccaggttg gcgagtctct
      121 tttaaccgaa gtaatccgga aagatctcgc tgtttgccag gcggccggcg cgagcggtga
      181 gtacctcgac ccctgtcgcg gtcacgagga cggtgtgctc gaactgggca gacaagcggc
      241 cgtcagcggt cacggcggtc cattcatcgt cgagaatctc aacctcgtgg gtgccgaggt
      301 tgatcatcgg ttcgatggtg aaggtcatgc ctgccttgag gcgcatgcct ttgccgcgct
      361 cgccgtagtg cgcgaccttg ggctcgtcgt ggaacttgcg accgatgccg tggccgacga
      421 agtcttcgac gaccgagcaa ccgcgcgcct cggcgaactc ctgaatggcg gctccgatgt
      481 cgccgagccg cgcgccgggc cgcacctcgg cgatgccgag ctcgagggac cgacgtgcga
      541 cctcggtcac gagcttcgct tcttcactcg gcttgccgac gtaaaacgtc gcggaggtat
      601 cgccgtgaaa accccggtag atatgggtga tatcgacgtt gacgatgtca ccgtcgcgga
      661 gcgcgcgcgc tgacggaatg ccgtgacaca cgacctcgtt gaccgaggtg cagatgctct
      721 tggggaaggg gggactgtcg ccgttgcgat agttgagcgg cgccggtcgc gcgcctttct
      781 tcagggtgtc ttcgtgcacg aactggttga gttcgttcgt cgtcacgcct gcccggatga
      841 gctccgcgat tttcatcagc gaatcacccg caagccgacc gacttcgcgc atcgcgtcga
      901 tctcgcgcgc gctcttgatc tcgacggagc tcgatcgaaa atggaggtcc aacgccatat
      961 ctcctggagc ccgcagtcta cctcagcacg cggagccctg catcgtgctc gacggcgttc
     1021 cgcacctcgg cggtgtccgg ctcgcagcga aagtgcagca ccttgcccgc tccgtccctg
     1081 taatggcgcc cgaagacgac gagcctggag ccgacccact tggcgcccgc gccgtcgagc
     1141 cacgcgtacg aggggctagt cgccggtacc ttgagcacga ccggacctgg tggcgcttgc
     1201 ccgacgaggg gtgcgccgac tggcgccagc gcgacttcgt aagcaccccg atgcgcgacc
     1261 ccgccgacgc gcgacaccgt ctcgacgcgt gcgacgagca cgaactcggc ttggcgcgtg
     1321 cgctccttga gcttcgggtc cttccccgga tggcggcctt cggggtcgaa gccaaagacg
     1381 gccggagcga acacgtcatc gaagagcacg gccgcctcgg gcgagtaggg cgccggcgcc
     1441 gcgtcggcgt ccgctgcatg cttttgcgtg ccggagcagc cgttcggacc gagcacgagg
     1501 agcaccaccg cggcaggacg gcgccagaag gtgaaccggg tcatgaggag cgagggcttc
     1561 gggtccgtgc cctggccagg tggcgtcaca gtttggtcta gcacgccggg gaccgagaaa
     1621 aagatgaaca tcgggcgccc gacgtgcgta taacgatcgg ccgtgagccg ggtacaaagc
     1681 ccggtgtaaa gttatcgcgg ctcgcaggta gattcaggag gaatcccaat gaggctcatg
     1741 tcctggacgg tcgtcgccgt ccctctcttc gccgtctcag ctctcgtcgc cgtaccggcc
     1801 gcggctgaaa aatccggagc ggagaagccc gccaagggcg gtcccggttc cgtcggcaaa
     1861 aagatcgcgc tcgcccccga gggcttgaag ttcggcatga gcctcgaagc catcgcgaag
     1921 ctctatgaca agagcttcga ccaagagtac ttgccgctct acaagaaggc ggcgcccggc
     1981 ccggagacgg aagcgctcga cgccgagatc aagcagagga aggcggaggt tcgccgcagc
     2041 aaggtcgact tcaacaacac cccgacgggt gtggatcaga ccgcgctcaa gggtgagtac
     2101 agctacgcca acggcgagag catggcgcgc ctgacgctgc acagcggtac cgagcgttat
     2161 ttcttcttct tcaacgatcg gctctggaag gtctacgacg agcacaagtt gaagaagggc
     2221 tcgccgctcg gggacaacta cgccgacgcc gtcaaggtgc tcaccagtaa atacgggagc
     2281 ccaccgaaaa aggcgcccgc caacgccgac aagggccagt tcttcgacga gtcggtgtgg
     2341 acgacgcccg acatggtgat ccgcgcggtc gatcgcgatt ccacgctcgc catggtttac
     2401 gccgatcgcg aagtgcaaga ggacctgccg aagaagcgac gcaaccaccc gaaggacgaa
     2461 accgcgatgg atccggacgt cgcctccgcg ctcaagaaga acgagcctcc gcccgggccc
     2521 aaggacaaag gcggagcgag cgacaagaag ggtggcggta agggcgctcc gaagaaatag
     2581 cgccccgagc gccgcgtccg ccgtgctcgc aacgagccga gcacggcgtg aggcccacgg
     2641 agaactgggc cgagcgcgag cgttgccggt gacgggtggt ggctagagca gctcggcgcc
     2701 ggcgggcaag agcggccccg acgtgatctc gatcttgagg tcggggaacc gcgccgtgag
     2761 gagcggctcg agcacgcggc ggcgggcgag cgtgttgccc gggcagccgg agaagcgccc
     2821 ggcaaggtgg agcgtcagcg agcggtcgcc gaccgccacc aggtagacct gaccgccgtc
     2881 ggcccggacc agcggaccca cgatttcgcg gacgatctcg aggatctggt cccgcggagc
     2941 gcccatcagt ggagcgggag cctagcacgc ctcgcggtaa gtttgcgcct acccttgcag
     3001 cagctccggc gcttgggata caaggcgcca gaagccgctg gcggagcacc cgttgggtgc
     3061 tagcgttccg cccctaacgt cgaggaaatt atggttcaga ttcgcctggc tcggcacggc
     3121 acgaagaaga cgccgtttta ccgcatcgtg gtcgccgagc atcgccgtcc gcgtgacggc
     3181 cgcttcatcg agaacatcgg gacgttcgat cccgccggtg cgctcgccat cgacatggcc
     3241 cgcttcgagc actggaagaa gcacggcgcc caagcgtcgc acacgctcga tcgcctcttg
     3301 aagaagcaag cgcgcgcggc agccgccgcg agcacctgaa cggcatggcc ctcaaggctc
     3361 tcgtttcgac gatcgcccgg gcgctggtcg atgatccgga cgccgtcgaa gtcacggaag
     3421 tggacggcga ccgcaacgcg gtactcgagc tccgcgtcgg tgaaggcgac atcggtaagg
     3481 tgatcggcaa ggacgggcgc acggcgcagt cgatccgcac catcttgctc gcggcttcga
     3541 ccaagatcgg ccggcgcgtc catctcgaca tcctcgacta ggccgagcgc ggtcgtggcg
     3601 cgcgcgagcc ggctcgaaat cggcaagatc ggggcgccgc acggcttgcg cggtgacgtg
     3661 cacgccacgc ttcacttcga gggcagccaa gcgctcgcag ccggcgtgcg tgtgggcgtc
     3721 gtgggcgcga gcggcgcgcg cgagctcgtc ctgcgttcgg cgcaggcgca cggtcgcggc
     3781 atgctgctcg gcttcgaggg catcgacgat cgcgacgctg ccgtcgcgct gcgcggcgcg
     3841 cgcctcgagc tcgaccggag cgcgctgccg ccgctcgccg acggcgagta ctacttggtg
     3901 gacctcatcg gcgcgaccgc cttcggccct gacggccccg tgggcgaggt cacgggcatc
     3961 tcggcgcatc cgagcgtgac gacgctcgag ctgcgtctca cggacgggcg cgtcgcagag
     4021 cagccgctca cggcgccctg ggtcaaacgc gtcgatgtcg atgcgggacg cgtcgagctc
     4081 gaaaacctcg acggcctcgt gatttgaacg cgcgtcccac gagctatcga tgcatgtcgc
     4141 catcgtcacg ctgtttccgg agctattcga gccatttctt cgaacgagct tcgtcgggcg
     4201 cgccgtcgag cgcggcgtgc tcgcggtgac gctcgaagat ctgcggccgc acgggctcgg
     4261 taaccatctg tcggtcgacg acacgccgta cggcggcggc tcgggcatgg tgatgcgccc
     4321 ggactgcgtc gtatcggcga tggacgccgc ggaacgcaag gtcgcggcgc gcggccggcc
     4381 gaagcgcatt ttgctcacgc cccagggcag gcgcttcgat caggcgcggg cgcgcgctct
     4441 ctccgagctc tcggcgttca cgctcgtgtg cggacgttac gaaggcttcg acgaacgcgt
     4501 gcgttacttc gccgacgacg agatctcgct cggggatttc gtgctgacgg gcggcgaagt
     4561 cgcggccatg tgcgtgatcg aaagcgccgt gcggctcctg cccaacgtgc tcggcaacga
     4621 gcagtcgctg cgcgaggagt cgttcagccc cgaatgcggc gggctgctcg aatacccgca
     4681 tttcacgcgg cccgtgagct ttcgcggcta cgaggtgccc gaggtcttac gctcgggtga
     4741 ccacgaaaaa atcgcgacgt ggcggcgcgg tcaagcgcgc gcccgcagtc gcgcgcgccg
     4801 gcccgatctc gcgcgccggg gaggtggcaa gtgaggcggc tcgcggcggc tctcgtgcat
     4861 catccggtgc tcgatcgcca gggagcgatc gtgacgacgg ccatcacgaa cctcgatctg
     4921 cacgacatcg cgcggagcgc tcatacttac gggctcaccg attttttcgt ggtgcatccc
     4981 gtgggcgcgc agcgcgagct cgccgagcgc gtacgggaac attggaccag cggctcgggc
     5041 gcgcgccgga tcccggatcg gacgcccgcg atgctcgggc tccgcatcgt cgtg
//
LOCUS       DATIML010000840         2658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4219323, whole genome shotgun sequence.
ACCESSION   DATIML010000840 DATIML010000000
VERSION     DATIML010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4219323"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2222
                     /locus_tag="VLJ38_14585"
     CDS             <1..2222
                     /locus_tag="VLJ38_14585"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSU40803.1"
                     /translation="SDGEGFFSEEKSDTDSTVRWVSEGVPAFQIVNVCRSGRYAVEKT
                     IVTDPERHVLLQRTCFSPKAPAERRYHLYALLAPHLGNSGMENDARVGDYDGIPMLLA
                     ERPGYALALACSAPWLRRSAGYVGVSDGWQDVHAHGHMTWQYEAATQGNVALIGEIEF
                     ADGVPFVLALGFGRTAKAAAERARLSLNHGFDTALVRYTEEWSHWQRSLHSRARWPEG
                     AEEAYRASAAVLAVHESKEFPGATIASLALPWGESRGGGMVAGYHVMWPRDSYEAATA
                     LLALGARAEIVRALDFCAATQLEDGSWPQNMWLDGSAFGPGLQLDEVACPLLLFSLAR
                     RHDRLTTLDVQRLWPMLRKAAAFIVQRGPVSPEDRWEDAPGMSPFTLGCVIAALLIAA
                     ELADEHAEPKLAGFLRETADDYHAAIDDWLYAEGTPLARELGIDGYYVRVAPPEILAG
                     DVPLGRTKVPVISRGVGAKFAADTIVSVDALALVRFGLRRPDDARISNTLRAIDALLR
                     VETPVGPCWRRYTEDGYGERADGSPFSGSGIGRAWPLLVGERAHFELARGNRDEARRL
                     LEVMQRFGGATHLLPEQVWDAPAVPERALFLGGPTASACPLVWAHAEHVKLLRSLEDG
                     TVFDSPPQTRPRYLGGEARQAHVTWRFERPLRRLRPSSILRLETRARARVRWSDDDWS
                     TVRDAEAVDTGLGLFVTDLPTAMLEVGRTVRFTYFWPESGRWEGRDFHVEVGYRDRS"
     gene            2228..>2658
                     /locus_tag="VLJ38_14590"
     CDS             2228..>2658
                     /locus_tag="VLJ38_14590"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase"
                     /protein_id="HSU40804.1"
                     /translation="MSLSQSTAGIDALSVSAFSMPTDLPEADGTFEWQRTVLVTVELT
                     GGGERGFGYTYADEATAKVIESALAEVVLGADAFAIPALRAAMRRKVRNIGSRGVAAM
                     AISAVDTALWDLKARVLGVPLLALLGARREKVAAYGSGGFTS"
BASE COUNT          389 a          878 c          942 g          449 t
ORIGIN      
        1 tcagcgacgg cgaagggttc ttttcggagg agaagagcga taccgactcg acggtgcgct
       61 gggtgagcga gggcgttccg gcgttccaga tcgtgaacgt gtgtcgctcc ggacgctacg
      121 ccgtcgaaaa gacgatcgtg accgatccgg agcgccacgt gctgctccag cggacgtgct
      181 tttccccgaa agctcccgcc gaacgtcggt atcacctgta cgcgctactc gcgccgcacc
      241 tcggcaattc gggcatggaa aacgacgcgc gcgtcggcga ctacgacggg attccgatgc
      301 tgctcgccga gcgtcccggg tacgcgctcg cgcttgcgtg ctcggcgccg tggctccgtc
      361 ggtcggccgg gtacgtgggc gtctcggacg gctggcagga cgtccacgcg cacggtcaca
      421 tgacgtggca gtacgaagcc gccacccaag gcaacgtggc actcatcggt gaaatcgagt
      481 tcgccgacgg cgtgccgttc gtgctcgcgc tcggtttcgg gcgcacggcg aaggcagcgg
      541 ccgagcgcgc gcgcctgagc ctcaatcacg gcttcgacac cgcgctcgtc cgttacacgg
      601 aagaatggtc gcactggcag cgctcgttgc attcgcgcgc gcgctggccc gagggcgctg
      661 aagaggcgta ccgggcgagc gccgctgtgc tcgccgtgca cgagtcgaag gagtttcccg
      721 gagccacgat cgcgagtctt gccttgccgt ggggtgagag tcgcggtgga ggaatggtcg
      781 ccggttacca cgtgatgtgg ccgcgcgact cgtacgaagc cgcgacagcg ctccttgcgc
      841 tcggagcgag ggccgagatc gtgcgtgccc tcgatttttg cgcggccacg cagctcgagg
      901 acggcagctg gccgcaaaac atgtggctcg acggctcagc cttcggcccc ggcctccagc
      961 tcgacgaggt ggcgtgcccg ctcttgctct tctctctggc tcggcgccac gacaggctca
     1021 cgacgctgga cgtgcagcgc ctctggccga tgttgcgcaa agcagccgcg ttcatcgttc
     1081 agcggggtcc cgtttcaccg gaagatcgct gggaggacgc ccccggcatg agcccgttca
     1141 cgctcggctg cgtgatcgcc gcgctgctca tcgccgccga gctagcggat gaacacgctg
     1201 agccgaagct ggcgggcttc ctgcgcgaaa ccgcggacga ctaccacgct gctatcgacg
     1261 attggctcta cgccgagggc acgccgctcg cgcgtgagct cggcatcgac ggctactacg
     1321 tgcgtgtcgc gccccccgaa atcctcgcgg gcgacgtgcc gctcggacgt acgaaggtgc
     1381 cggtcattag ccgcggcgtg ggcgcgaagt tcgcggccga taccatcgtc agcgtcgacg
     1441 cgctcgccct ggttcgcttc ggcttgaggc gaccggacga tgcgcgcatt tcgaacaccc
     1501 tgcgcgcgat tgacgcgctc ttgcgggtcg agacgccggt cggcccgtgc tggcggcgct
     1561 acacggagga cggctacggc gagcgggcgg acggttcacc cttcagcggc agcggcatcg
     1621 gccgagcgtg gccattgctc gtcggcgagc gcgcccattt cgagctggcg cgcggtaatc
     1681 gcgacgaggc gcgccggctg ctcgaggtca tgcaacgctt cggcggcgcc acgcacctgt
     1741 tgcccgaaca ggtgtgggac gcgcccgccg ttcccgagcg agctctgttc ctcggcggtc
     1801 ccaccgcgtc ggcctgtccc ctcgtttggg ctcatgccga gcacgtgaag ctcttgcgtt
     1861 cgctcgagga cggcaccgtc ttcgactcgc cgccgcaaac acggccgcgg tacctcgggg
     1921 gagaagcgcg ccaggcgcac gtgacgtggc gcttcgaacg tccgctgcgc cgactgcggc
     1981 cgtcttcgat cctgcgcctc gagacgcggg cccgggcgag ggttcgctgg tcggacgacg
     2041 actggagcac cgttcgagac gcggaggccg tggacaccgg gctcggcctc ttcgtcaccg
     2101 acctgccgac cgcgatgctc gaggtcggcc ggaccgttcg tttcacgtac ttttggcccg
     2161 agagcgggcg ctgggagggc agggactttc acgtcgaggt cggttatcgc gatcggagtt
     2221 gaaccgcatg tcattgtccc aaagcacggc aggcattgat gcgctcagcg tgagcgcgtt
     2281 ctccatgccg acggatttgc ccgaggcgga cggcacgttc gaatggcagc ggacggtgct
     2341 cgtgacggtc gagctcacgg gcgggggtga gcgaggtttc ggttacacgt acgccgacga
     2401 agccacggcg aaggtcatcg aaagcgcgct cgcggaggtc gtgctcgggg ccgacgcgtt
     2461 cgcgatcccg gcgctgcggg cggccatgcg ccgtaaagtg agaaacatcg gctcgcgggg
     2521 tgtggccgcc atggcgatct cggccgtgga taccgcgctt tgggacttga aggcgcgagt
     2581 gctcggcgtg ccgctgctcg cgctgctcgg cgctcgtcgc gaaaaggtcg ccgcctacgg
     2641 tagcggcggc ttcacctc
//
LOCUS       DATIML010000841         2175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1914459, whole genome shotgun sequence.
ACCESSION   DATIML010000841 DATIML010000000
VERSION     DATIML010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914459"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..814)
                     /locus_tag="VLJ38_14595"
     CDS             complement(251..814)
                     /locus_tag="VLJ38_14595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40805.1"
                     /translation="MVAATLLAACIAGAPATSNAADSREIQGYDVRVPNAELNAGAAR
                     ARVQSNHDTLRGVLVDYPHYSQIITRFEKARVVGRVGQQTDVYLEVPILHGATKIWAI
                     VRFDAPKTEGTDEVIRGRMVRGNVKRLDAAWRVRKVDETSADLALELLIVPDLPAPHS
                     LILSEVRRAAARAVSGARAEAERRAHR"
     gene            complement(986..1405)
                     /locus_tag="VLJ38_14600"
     CDS             complement(986..1405)
                     /locus_tag="VLJ38_14600"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSU40806.1"
                     /translation="MASALPATELTALLGRGTHFEGKLHFEGRVRIDGTFRGEIRGDD
                     ALVIGEGAEVEAEIEAGVVIVKGGTLTGNVRAAHSIELYVPARASGTLHAPEVHIEKG
                     VQFAGTCTIGPLEGPPAVTAPDGAPNAPAKPPAGGVA"
     gene            1439..>2175
                     /locus_tag="VLJ38_14605"
     CDS             1439..>2175
                     /locus_tag="VLJ38_14605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40807.1"
                     /translation="MRYPSLVIRVSLAPLLGLLLLGVSGRAPAETPAADHEREPAPEA
                     AASPKKRPLLWHDSTVVWQQRAGSQTVHVGSDYQSSDPYYDWVFYLRPRFYFWENERS
                     SVSLRAQVWTTYEFTNSDITTQKNELIFGDTLLSLVPAHAFVKQGEYLTELELSLPRL
                     VLPTSKASYDSGEIAQLGVRAYLLQAFPLREGQSFLARAHAALRVGYSYQFARSTVPE
                     NPNLNQGVTDWEGVVVNSHQVAGAALA"
BASE COUNT          351 a          708 c          741 g          375 t
ORIGIN      
        1 gatcataaag gccacggcgg ggaggtaggg gcatgtggga aaaacactgc ctgagggggc
       61 aaagcggcga gtgtcccgcg attatagccg caagcgcgcc caggtcaggc gcgcttttgt
      121 atttcgtccg ttgtcacggt agcgtttggg gccgcggtca cgttggtcgt tggggccccg
      181 gccccaacga catccggcga gtttcgtccg accgccgctt cccgcgcgcg ttcgcgggtc
      241 tcggattgga tcagcggtgg gcgcggcgtt cggcttcggc gcgtgctccc gagacggctc
      301 gcgcggctgc gcgccggact tcgctcagga tcagcgaatg cggcgccggc aggtccggca
      361 cgatgaggag ctcgagcgcg aggtccgcgg acgtttcgtc tacttttcgg acgcgccagg
      421 cggcgtccag gcgtttgacg ttgccgcgca ccatgcggcc gcggatgact tcgtccgtac
      481 cttcggtctt cggcgcgtcg aaacggacga tcgcccaaat tttggtcgcg ccatggagga
      541 tcggtacctc caggtagacg tccgtttgct ggccgacgcg accgacgacg cgtgccttct
      601 cgaagcgggt gatgatctgc gagtagtgag ggtagtccac gagcacgccg cgcagcgtgt
      661 cgtggttcga ctgcacacga gcgcgggcgg caccggcgtt gagctccgcg ttggggacgc
      721 gcacgtcgta cccttggatt tcccggctat cggccgcgtt gctcgtcgcg ggagcaccgg
      781 cgatgcaggc cgcgagcagc gtagcggcaa ccaaggagtt cgaacgtgag aagaaacgga
      841 ccatacgcga cggaattgca cgccctatgc cgaaccgccg cacgaggtca actcccaaat
      901 ttcgcgcact tacgtggcac agcgtaacgg ccgacgggcc gagtgacgca ccagcggcac
      961 accgttacgc gaaacctgcg ggccgctaag caacaccgcc cgcgggcggc ttcgccggcg
     1021 cgttgggggc cccgtccgga gccgtgacgg cgggcggccc ctcgagcggg cctatcgtgc
     1081 acgttccggc gaactgcacg cccttctcga tgtgcacttc gggggcgtgg agcgtcccag
     1141 aggcgcgcgc gggcacgtag agctcgatcg aatgggccgc gcgtacattt cccgtgaggg
     1201 taccaccctt gacgatgacg acgccggctt cgatctcggc ttcgacctcg gcgccttcgc
     1261 cgatgacgag cgcgtcgtcg cctcggatct caccgcggaa agttccgtcg atgcgcacgc
     1321 gtccttcgaa gtgaagcttg ccttcgaagt gcgtgccgcg gccgaggagg gccgtgagct
     1381 ctgtagccgg aagcgcggaa gccataggcg ggtggcatcc tagcgcgggc cgggggccgt
     1441 gagataccct tcgctcgtga tccgcgtctc gctcgcgccc ctgctcgggc ttctactgct
     1501 cggggtgtcg ggccgagccc ccgcggagac gccggccgcc gatcatgaac gagagcctgc
     1561 gcccgaagct gccgcgtcgc ccaaaaaaag gccgctcctc tggcacgact cgaccgtcgt
     1621 ctggcagcag cgggcgggca gccagacggt ccacgtcggg tccgactacc agagcagcga
     1681 cccgtattac gactgggtct tttatctgag gccgcgcttc tatttttggg aaaacgagcg
     1741 ctcctccgtc agcctgcgcg cgcaggtttg gacgacctac gagtttacga acagcgacat
     1801 caccacccaa aagaacgagc tcatcttcgg tgacacgctg ctctcgctcg tgccggcgca
     1861 cgccttcgtg aagcaaggcg aatacctcac cgagctcgag ctcagcttgc cgcggctcgt
     1921 gctgccgacg tccaaggcga gctacgacag cggagaaatt gcgcagctcg gtgtgcgagc
     1981 ttacttgctc caggcgtttc cgctgcgtga ggggcagtcg ttcttggcgc gagcgcacgc
     2041 ggcgctgcgc gtgggctact cgtaccagtt cgcccgctcg accgtgccgg agaatcctaa
     2101 cctcaaccag ggcgttaccg attgggaagg cgtcgtcgtc aatagtcacc aggtcgcggg
     2161 cgcggccctc gccga
//
LOCUS       DATIML010000842         6898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1045261, whole genome shotgun sequence.
ACCESSION   DATIML010000842 DATIML010000000
VERSION     DATIML010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6898
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1045261"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..754)
                     /locus_tag="VLJ38_14610"
     CDS             complement(<1..754)
                     /locus_tag="VLJ38_14610"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSU40808.1"
                     /translation="MTDAATASVRQAEPAPSVAWLRERLTPTSVIPIALVASLLIGAG
                     DFVTGVDVAFTLLYVFPIALGTWYRDRRFGWILAVLCATLSAAAEVGWRLEHRGHVRF
                     FWLFWNHGGSLGIFVLCVEVLHRLRAYVENERLGRRRVIEQLRHAERLNVVGKLAAGV
                     AHELGTPLNVISTAAELLDADAPASPMTHASCRMIIEQSGRMAAIIRQLLDFGRRGGS
                     DRSTTDLVSLVESTIALMRPLARKRHVELSLAV"
     gene            complement(751..1188)
                     /locus_tag="VLJ38_14615"
     CDS             complement(751..1188)
                     /locus_tag="VLJ38_14615"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40809.1"
                     /translation="MTQDAFDRPTSDARRPPRVLVADDSAEQRWTLRLALSMMGFEVT
                     EAADGRELFWAIEGLERHPATEPELVIADVYMPVYNGLDALGAWSEGGQRHPLIVITA
                     FPDEVLRRRVADLGAFLLAKPFKLAALARTVRLALRRARASSS"
     gene            complement(1374..2609)
                     /locus_tag="VLJ38_14620"
     CDS             complement(1374..2609)
                     /locus_tag="VLJ38_14620"
                     /inference="COORDINATES: protein motif:HMM:NF019311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibro-slime domain-containing protein"
                     /protein_id="HSU40810.1"
                     /translation="MGQAHEDSLYRQCLRYRRYSGLVRTGEFMLRALTLGSLVMLSLA
                     SCGRTGLLTAEPCAEEGATMACANDCGDGFSSCRKGFWSACEVPDTARACENTCGSGT
                     ETCRDGAWSSCEVAPVERSCSGFCGQGVETCANGGWGRCEVPAVELPCSNTCGDGVQG
                     CENERLGYCAVPVSTRACASACGSGHEACVDGAWQACDAPQPRPPLLHAVIRDFQPAT
                     NPDFEFDLHGQDGNEPYIVATLLGQDDTPTYTNDPRIHTTSETTFYEWYHDTPNSFRI
                     EYDIQLQNSPNRPGFFLYDNPAFFPIDNRGFGNDGYPHNFHFTLATMLTFHYVGGEVF
                     DFSGDDDIWVFVNRHLAINLGGLHQRESASVSLDAHAAEFELSPGTTYAIHIFFAERH
                     SVDSEFRVETSVADQGSCP"
     gene            2595..3842
                     /locus_tag="VLJ38_14625"
     CDS             2595..3842
                     /locus_tag="VLJ38_14625"
                     /inference="COORDINATES: protein motif:HMM:NF024779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HSU40811.1"
                     /translation="MRLAHLASKYAARRTVARAAAVLAFARVISSVTTASALEAPAAS
                     EGYRISVITMGPGDAFVSYFGHDAFLVERAGLPALVYNFGTYTEQAIAPHHVLGGTLL
                     YYLSVDYFEHTLRIYRAQNRTVIQQVLALDAATAESLAMALSKNSRPQNTTYHYDFAL
                     DNCTTRVRDLIDRELHGALRRQLDRPSPYSYRDHALRFTARDLALSFLFDLGLGKPAD
                     RRLDAWDDAFLPDRLAAYLRRATVTNAAGTHPLVAREATLFAAKRAPVPERPPMREPY
                     YAFAGAMLGTLLIAAGSRPALRVAFGLACAAVGAFVGAAGVFVLLLLGTHVHPASHRN
                     FNALVCPAWALLLVPAGFRLAFGKSAPWERASFLAASSLLLAVAGTVVALGSGQASQR
                     VAMLSVPLLTGAWLGVRRARRVV"
     gene            complement(3796..4398)
                     /locus_tag="VLJ38_14630"
     CDS             complement(3796..4398)
                     /locus_tag="VLJ38_14630"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40812.1"
                     /translation="MSSPRVLVVMALEVESQGLFRERGVDVLYTGVGKVNAAYRLTRR
                     LAEERTRGATPLVVNLGTAGSRKHATGSVLACRRFVQRDMDVSGLGFPHGHTPFEDAV
                     PAALEFPAVFEELPHATCGSGDRFEAHSDDLDFDVVDMEAYALAKVCWFEHVPFACAK
                     FVTDGADGSAGSDWHSNLPVAARAFLKLHDELVARRAMLP"
     gene            complement(4443..6119)
                     /gene="ettA"
                     /locus_tag="VLJ38_14635"
     CDS             complement(4443..6119)
                     /gene="ettA"
                     /locus_tag="VLJ38_14635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HSU40813.1"
                     /translation="MPEFIFTMQDVSRVHPPDKRVLENITLAFYYGAKIGVIGTNGSG
                     KSSLLRIMAGIDKDFLGEAHAAPGIRIGYFAQEPELGPAETVREAVDEAVSDIRGLVK
                     EFEELSMKLGEPMSDEQMNKVLEKQAALQDKIDAIDAWSLDQRVDIAMEALRVPPGEA
                     KLADLSGGERRRVALCRVLLSRPDILLLDEPTNHLDAESVAWLERFLHEYTGTVVAVT
                     HDRYFLDNAAEWILELDRGRGYPFKGNYSSWLEQKQKRLAQEEKQESSRQRKLKQELE
                     WVQASPRARQAKSKARLAAYEDLLSQANKGSSDPTEISIPPGPRLGDIVIETEHLKKG
                     FGDRLLVDDLSFRLPRSGIVGVIGPNGAGKTTLFRMLVGEDKPDAGTLRIGETVKIAY
                     VDQSRASLAGDKNVWQEISGGEEKLLLGKREVASRAYCSWFGFKGADQQKKVGSLSGG
                     ERNRVQLAKLLKEGGNLLLLDEPTNDLDVDTLRALEQALLDFPGCAVIITHDRWFLDR
                     IATHILAFEGDSHVEWFEGNYRMYEEDRRRRFGEEADQPHRIKYKRIKLG"
     gene            complement(6064..>6898)
                     /locus_tag="VLJ38_14640"
     CDS             complement(6064..>6898)
                     /locus_tag="VLJ38_14640"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40814.1"
                     /translation="AASGRIPPEIFARALDAVGELLAVAREYGATSVVVAGTSALREA
                     ENGTAFGLAVRARFGVGVEILSGEDEGRLVYDGARSRMSELPERVGVIDLGGGSAEVA
                     IGDGEVCGYARSLPLGFLRLARVLDVHGPVDHQGFERVAEYVRTCSATVREDARALAP
                     RTWLLSGGTARASAGVLGVEPGAAISTRQLGAAAERFASADTLKLIGFGVEPARARGF
                     GLAVAVLATLCEAFGAPAARVSPGGLREGLLLREIGGNSTRHARVHLHDAGRFARSPA
                     G"
BASE COUNT         1121 a         2367 c         2260 g         1150 t
ORIGIN      
        1 gcacggcgag cgagagctcg acgtggcgtt tgcgggcgag cggccgcatc agagcgatcg
       61 tgctctcgac gagcgacacg agatcggtcg tgctgcgatc ggagccgccc cgccgcccga
      121 agtcgagcag ctgccgaatg atcgccgcca tgcgtccgga ctgttcgatg atcatgcggc
      181 acgatgcgtg agtcatgggc gaggccggcg cgtccgcgtc gaggagctcg gctgccgtcg
      241 agatcacgtt gagcggcgtg ccgagctcgt gcgccacgcc cgccgcgagc ttgccgacga
      301 cgttgagccg ctcggcgtgg cggagctgct cgatgacgcg acgccgtccg agccgctcgt
      361 tttcgacgta ggcgcgcagg cggtgcagca cctcgacgca gagcacgaaa atgccgagcg
      421 agccgccgtg attccaaaac agccaaaaaa agcggacgtg gccgcgatgc tcgagtcgcc
      481 agccgacctc ggcggcggcc gacaaggtcg cgcacagaac ggcgaggatc cagccgaagc
      541 gccgatcacg gtaccaggtg ccgagcgcga tcggaaaaac gtagagcagc gtgaacgcca
      601 cgtcgacgcc ggtcacgaag tcgcccgccc cgatcaagag cgaagcgacg agcgcgatcg
      661 gaatcacgct cgtcggcgtc agtcgttcgc gcagccacgc cacgctcggc gcaggctcgg
      721 cctgccgcac gctcgctgtc gcagcgtccg tcacgacgag ctcgcgcgtg ctcgccggag
      781 cgccagccgt accgtgcgag cgagcgccgc gagcttgaag ggcttggcga gcaggaatgc
      841 tccgaggtcg gcgactctgc gtctcagcac ctcgtccggg aacgctgtaa tcacgatcag
      901 aggatggcgt tgtccgcctt cgctccaggc gccgagcgcg tcgaggccgt tgtaaacggg
      961 catgtaaacg tcggcgatca cgagctccgg ctcagtcgcc ggatgccgct ccaggccttc
     1021 gatggcccaa aagagctcgc gcccgtcggc ggcttcggtc acctcgaagc ccatcatcga
     1081 gagggcgagg cggagcgtcc agcgctgctc ggcggagtcg tcggcgacga gcacgcgcgg
     1141 gggtcgccga gcgtcggatg tcggtcgatc gaacgcatct tgagtcatgg gcgacctcgc
     1201 gcagttgaac cagcgaacgc ctcggatcat tcccgctcgc acccgagcgg tactcgtcgc
     1261 gcgcgtgaat caggccacgt cgcgtctgcc gcgacggctc aacctgcaaa cgactttcgt
     1321 tgcctcaggc gcagcttaaa gttgcttgct gccttgcgtc gaaccgcgac ggctcacgga
     1381 cacgagcctt gatcggccac ggacgtttcg acgcggaact ccgagtccac gctgtgacgc
     1441 tctgcgaaaa aaatgtgaat ggcgtaggtg gtccccggcg acagttcgaa ctcggcggcg
     1501 tgggcgtcga gcgacacgct cgcgctctcg cgctggtgta ggccgcccag attgatcgcg
     1561 aggtggcgat tgacgaagac ccagatgtcg tcgtcgccgc tgaagtcgaa gacctcgccg
     1621 cccacgtaat ggaacgtgag catggttgcg agcgtgaagt gaaaattgtg cggataaccg
     1681 tcgttgccga agccgcgatt gtcgatcgga aagaacgcgg gattgtcgta gagaaagaat
     1741 ccggggcggt tcggcgagtt ctggagttga atgtcgtact cgatacgaaa gctgttcggc
     1801 gtatcgtggt accactcgta aaacgtggtc tcgctcgtcg tatgaatgcg cgggtcgttc
     1861 gtgtaggtcg gcgtatcgtc ctggccgagc agggtagcga cgatgtacgg ctcgttgccg
     1921 tcttggccgt gcaggtcgaa ctcgaagtcg ggattcgtcg ccggctgaaa atcgcggatg
     1981 acggcgtgca gcagcggcgg gcgcggctgg ggcgcgtcgc acgcctgcca ggcgccgtcg
     2041 acgcacgctt cgtgaccgga gccgcacgca ctggcgcaag cgcgtgtgct caccggaacg
     2101 gcgcagtagc cgagccgctc gttttcgcag ccctgcacgc cgtcgccgca cgtattgctg
     2161 cacggcaact ctacggccgg cacctcacac cggccccacc cgccgttcgc gcaggtctcc
     2221 acgccttggc cgcagaaccc gctgcagctc cgctccacgg gtgcgacttc gcagctgctc
     2281 cacgctccgt cacggcaagt ctcggtgccg ctgccgcagg tgttctcgca agcgcgcgcc
     2341 gtgtccggca cctcgcaagc gctccaaaaa cccttgcggc agctgctgaa gccgtcgccg
     2401 cagtcgttcg cgcaagccat ggtcgcgcct tcctcggcgc agggctcggc cgtgagcagc
     2461 cccgtacgcc cgcaactcgc cagcgagagc atgacgaggg atccgagcgt gagtgccctc
     2521 aacatgaact cgcccgtgcg gacgagcccc gagtaccgac ggtagcgcaa gcactgccgg
     2581 tagagggagt cttcatgcgc ctggcccatc tagcatcgaa gtacgccgcg cgccgaaccg
     2641 tcgcgcgcgc cgcggccgtt ctcgcgtttg cgcgcgtgat ctcgagcgtc acgaccgcga
     2701 gcgcgctcga agcgcccgca gcgagcgagg gctaccgcat ctccgtgatc acgatggggc
     2761 cgggtgacgc cttcgtctcg tacttcggtc acgacgcgtt cttggtcgaa cgcgcagggc
     2821 tccctgcgct cgtctacaat ttcggaacgt acaccgagca agccattgcg ccgcaccacg
     2881 tgctcggggg gacgctgctc tactacctga gcgtcgacta cttcgagcac acactgcgca
     2941 tctatcgcgc gcaaaaccgc acggtcatcc agcaagtgct cgcgctcgac gccgccacgg
     3001 cagagagcct cgccatggcg ctctccaaaa attcgcgccc ccaaaacacg acttatcact
     3061 acgatttcgc gctcgacaac tgcacgacgc gcgtgcgcga cctcatcgat cgtgagctcc
     3121 acggagcgct ccggcgtcag ctcgaccgac cgagccccta cagctaccgc gaccacgcct
     3181 tgcgcttcac cgcccgcgac ctggcgctct cgttcctgtt cgatctcggc ctcggcaagc
     3241 ccgccgatcg gcggctcgac gcgtgggacg acgcgttctt gcccgatcgg ctcgccgcgt
     3301 acctgcgccg cgcgaccgtc acgaacgcgg ccggtacgca cccactcgtc gcgcgcgagg
     3361 cgacgctctt tgcggccaag cgcgcgcccg tgcccgagcg gccgcccatg cgcgagccgt
     3421 actacgcgtt cgcgggcgcg atgctgggta cgctgctcat agcggcggga tcacggcccg
     3481 cgctgcgtgt cgcgttcggc ttggcgtgcg ccgccgtggg ggcgttcgtc ggagcagcgg
     3541 gggtgttcgt gctgctgctc ctcggcacgc acgtccatcc ggcgtcacac cggaacttca
     3601 acgcgttggt ctgtccggca tgggcgctcc tgctcgtgcc cgccgggttc cgtctcgcgt
     3661 tcggcaagag cgcgccctgg gagcgggcct cgttcctcgc ggcttcctcg ctgctgctcg
     3721 ccgttgcggg cacggtcgta gccctcggga gcgggcaggc gagtcagcgc gttgcgatgc
     3781 tgtccgtgcc gctgctcacg ggagcatggc tcggcgtgcg acgagctcgt cgtgtagttt
     3841 gaggaatgcc cgcgcggcga ccggcaaatt actatgccag tcgctaccag cgctgccgtc
     3901 ggcgccgtcg gtcacgaact tggcgcaggc gaagggcacg tgctcgaacc agcagacctt
     3961 cgcgagcgcg taggcctcca tgtcgacgac atcgaaatcg aggtcgtccg agtgcgcctc
     4021 gaagcggtcg cccgagccgc acgtcgcgtg cggaagctcc tcgaatacgg cggggaactc
     4081 gagcgcggcg ggtaccgcgt cctcgaacgg cgtgtgaccg tgcgggaagc cgaggccgct
     4141 cacgtccatg tcgcgctgca cgaagcggcg acacgcgagg acgctcccgg tcgcatgctt
     4201 gcggctcccg gccgtcccga gattcacgac caacggcgtc gcgcctcgcg tgcgctcctc
     4261 agccaaccgc cgcgtgagcc ggtacgcggc gttcaccttg ccgacgcccg tgtagagcac
     4321 gtcgacgccg cgttcgcgaa agaggccctg ggactcgacc tcgagggcca tgacgacgag
     4381 gacgcgcgga gaactcatgc gacgagaatc tttcccacag gcaccgcttc gaatgccacc
     4441 cgttatccga gcttgatgcg tttgtatttg atccgatgcg gttggtcggc ttcttcaccg
     4501 aagcgccggc ggcgatcttc ttcgtacatg cggtaattgc cctcgaacca ttccacgtga
     4561 ctgtcgcctt cgaacgccaa gatgtgcgtc gcgatgcgat ccaaaaacca gcgatcgtgg
     4621 gtgatgatca cggcgcagcc gggaaaatcg agcaacgctt gctcgagcgc tcgcagcgtg
     4681 tcgacgtcga gatcgttggt gggctcgtcg agcaggagca ggttgccgcc ttccttcaag
     4741 agcttggcga gctggacccg gttacgctcg ccgcccgaga gtgagccgac cttcttttgt
     4801 tggtcggcgc ccttgaagcc gaaccacgag cagtaagcgc gcgaggcgac ttcgcgcttg
     4861 ccgagcagga gcttttcctc cccgcccgag atttcttgcc agacgttctt gtccccggcg
     4921 agcgacgcgc gcgattgatc gacgtaggcg attttgacgg tttcgccgat gcgcagcgtg
     4981 cccgcatccg gcttgtcctc tccgaccagc atgcgaaaga gcgtcgtctt gccggcgccg
     5041 ttcgggccga tcacgccgac gatgccgctc cgcggcaggc ggaacgaaag gtcgtccacg
     5101 agcaagcgat cgccgaagcc cttcttcaag tgttccgtct cgatcacgat gtcgcccaag
     5161 cgcggacccg gcggaatgct gatctcggta ggatcgctcg aacccttgtt ggcttgactg
     5221 agcaagtcct cgtaagcggc gaggcgcgct ttgctcttgg cttggcgggc gcgcggcgag
     5281 gcctgcaccc actcgagctc ctgcttcaac ttgcgctgcc gcgagctctc ctgcttttcc
     5341 tcctgcgcga ggcgcttctg cttctgctcg agccaggacg agtagttgcc tttgaacgga
     5401 taacctcgcc cgcgatcgag ctccaaaatc cattcggccg cgttgtccaa gaagtagcga
     5461 tcgtgcgtga ccgccacgac cgtgcccgtg tattcgtgca aaaatcgctc gagccaggcg
     5521 acggattcgg cgtcgaggtg gttcgtcggt tcgtcgagca gcaggatgtc ggggcggctc
     5581 aagagcacgc ggcagagcgc gacgcgccgc cgctcgccgc ccgaaagatc cgcgagtttt
     5641 gcctcgccgg gcggcacccg cagagcctcc atcgcgatgt cgacgcgctg gtcgaggctc
     5701 caggcgtcga tggcgtcgat cttgtcctgc agcgcggcct gcttttcgag caccttgttc
     5761 atctgctcgt cggacatcgg ttcgccgagc ttcatgctga gctcttcgaa ctccttcacg
     5821 agcccgcgga tgtcgctgac cgcttcgtcg acggcctcgc gcaccgtttc tgccgggccg
     5881 agctccggct cctgcgcgaa ataaccgatg cggatgcccg gcgccgcgtg cgcttcgccc
     5941 aagaagtcct tgtcgatgcc ggccatgatg cgcaagagcg agctcttgcc ggagccgttc
     6001 gtgccgatga cgccgatctt cgcgccgtaa tagaacgcga gcgtgatatt ttcgaggacg
     6061 cgcttatccg gcgggtgaac gcgcgaaacg tcctgcatcg tgaagatgaa ctcgggcatg
     6121 ccgagtagaa ttaccaccaa tctcgcggag caagagcccc tcgcgtaagc cgcccggact
     6181 cacgcgcgcg gcgggcgcac cgaacgcctc gcacagcgtc gcgaggacgg cgacggcgag
     6241 gccgaaacct cgggcacgcg ccggctcgac cccgaatccg atgagcttca gcgtgtcggc
     6301 gctcgcgaag cgctcggccg cggcgccgag ctgccgtgtc gaaatcgccg cgccgggctc
     6361 gaccccgagc acgccggcgc tcgcgcgcgc cgtgccgccg ctcaagagcc aggtgcgcgg
     6421 cgcgagcgca cgcgcgtctt cgcgcaccgt cgccgagcag gtacgcacgt attccgcgac
     6481 gcgctcgaaa ccttggtggt cgacggggcc gtgcacgtcg agcacgcgtg ccaagcgcaa
     6541 aaatccgagc ggcagactgc gcgcgtagcc acagacttcc ccgtcgccga tcgccacctc
     6601 ggcggagccg cctccgaggt cgatcacgcc gacgcgctcg ggcagctcgc tcatgcgtga
     6661 ccgcgcgccg tcgtaaacga gccggccctc gtcctcaccc gacaggattt ccacccccac
     6721 cccgaagcgc gcgcgcacgg cgagcccgaa cgccgtccca ttttccgctt cgcggagcgc
     6781 gctcgtcccc gcgaccacga cgctggtggc gccgtactcg cgcgcgacgg cgagcagctc
     6841 gcccacggcg tcgagcgccc gcgcgaagat ttccggcggg atgcgaccgc tcgctgcg
//
LOCUS       DATIML010000843         3218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_758193, whole genome shotgun sequence.
ACCESSION   DATIML010000843 DATIML010000000
VERSION     DATIML010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758193"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..1476)
                     /locus_tag="VLJ38_14645"
     CDS             complement(178..1476)
                     /locus_tag="VLJ38_14645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40815.1"
                     /translation="MHVHELQRLVYGQQQLQLLSKAAALAVALAAAPAFAARVCAPPS
                     NGATAVHTRAQTNLEVRPGPGFFVVTGATAAADAACVSQKLANTALFDLVERIDAELG
                     IDPQIAVLLTASSLACDNLFYVPVANDVRGIGYEHEDARELFDDSPASRLEGIAFLND
                     FPYWQVHPDEFRKDFAHEIGHRFGARVHADGAGDTLLGRDNQHWSYFLDSAGSPLEGN
                     VWTQTDASEYVADTPLAVAGFSELDLYLMGSLPASQVKPSLLVATSAPATDCLGHPLT
                     ATSPPQSCGALAFDGSARSIDIAAVVEAEGERDPAADPTPRTLDVVYLVLSSGSDFPR
                     DECDALAAVLPERTTDFGAATRGALSLAPLADPEGSCDSASEAGSSTASAARIEACGC
                     RIGRAMPRSSFGALLAAFALLYLRRCGTRRRRSPFDASMR"
     gene            complement(1419..2072)
                     /locus_tag="VLJ38_14650"
     CDS             complement(1419..2072)
                     /locus_tag="VLJ38_14650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40816.1"
                     /translation="MKVVSIFGLVVVCAAAAGCGGGDEDKGNGAAQFNAISSSIAHPT
                     GKLDNTTAVGVAQEYEKISATSAAGLRLQSSSSASQTVACPSGGSYSVNASGDQSNVQ
                     ETLSYNNCCYEAACCFSGGGNWYFSTAGGSSFSYCGNYNLTLACDGESLSEKFSGCFN
                     ASGEWTYVVTIDSKTFAVTGSIDSGTGTLSITAANGSFSCTYTNYSGSCTGSSSFSF"
     gene            2219..>3218
                     /locus_tag="VLJ38_14655"
     CDS             2219..>3218
                     /locus_tag="VLJ38_14655"
                     /inference="COORDINATES: protein motif:HMM:NF025714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4403 family protein"
                     /protein_id="HSU40817.1"
                     /translation="MRSLACLGFLLGCTRFGPVYPERPPARPSALVPEPVPSRISLHL
                     AITGPSLRQALDGVVPASGDGSVSVLGSDRAYHWQREPLDVGFAGGRVAARTKVTATI
                     DLPISNLVVAFELHVSAEPVINTSYAFKLQATDVSVHSDDARLKMLDQVAGVFGRVGS
                     EVEARLREFTYDLKPMLEQAYERVRAPMPFALGDAAGCAVLKVLGVEAAPVILADGVE
                     KDFAFVVAPSVTIPCAPVALEPLPPLENVATVPTGPFTVTVPIVAAYSELTRGLGAAF
                     TNGKLFFSKEHPDLYLEKPELYEADDRLVLHLHIAGPVHELAIHTVIDGELYLTGHP"
BASE COUNT          508 a         1095 c         1056 g          559 t
ORIGIN      
        1 ttatcggcag cggctcgcaa ccggttgcgg aaaaaggtaa gatttttccg tccggacgcc
       61 acgaggcgcg cgatgtcgcc tgggggtgct ttctggcccc accacagcga cggacgcgct
      121 tctggttcgg cggttcgggg aaattcgagc gcgagttcga acgggatctc ggtgcgttca
      181 tctcatggac gcgtcgaacg gtgagcgccg gcgccgcgtt ccgcatcgcc gtaagtagag
      241 cagcgcgaat gccgcgagca acgcgccgaa gctcgagcgc ggcatcgcgc gtccgatacg
      301 acatccgcac gcctcgattc gcgcggccga cgccgtggac gagcccgctt cgctagcgct
      361 gtcgcagctt ccctccggat ccgcgagtgg cgcgagcgaa agcgcgccgc gtgtcgccgc
      421 gccgaagtcc gtggttcgct ccggcagcac ggccgcgagt gcgtcgcatt cgtcgcgcgg
      481 gaaatccgag ccgctcgaaa gcacgaggta cacaacgtcg agcgttcgtg gcgtggggtc
      541 ggccgccggg tcacgctcac cttcggcctc tacgacggca gcgatgtcga tgctgcgcgc
      601 gctgccgtcg aacgctaggg cgccgcaact ctgcggcggc gaggttgcgg tgagcggatg
      661 tccgaggcag tcggttgccg gcgcgctcgt ggcgacgagc aggcttggtt tcacttggga
      721 cgccggcagg ctgcccatca agtagagatc gagctccgaa aatccggcga cggcgagggg
      781 cgtgtctgcg acgtactcgg aagcgtcggt ctgcgtccag acgttgccct cgagcggcga
      841 cccggcgctg tcgagaaagt acgaccagtg ctggttgtcg cgcccgagca gcgtatcgcc
      901 tgcgccgtcg gcgtgcacgc gcgcgccgaa gcggtgtccg atctcgtgcg cgaagtcctt
      961 cctgaactcg tcgggatgca cttgccagta cgggaaatcg ttgagaaagg cgatgccctc
     1021 gagccggctc gcggggctgt cgtcgaagag ctcgcgcgcg tcttcgtgct cgtagccgat
     1081 gccgcgcacg tcgttggcga ccgggacata gaacaaattg tcgcaagcga gcgagctcgc
     1141 ggtcagtagc accgcgattt gcggatcgat gccgagctcg gcgtcaatgc gctcgacgag
     1201 gtcgaagagc gcggtgttcg cgagcttctg tgagacgcac gcggcgtccg cggcggccgt
     1261 tgcgcccgtc acgacgaaga agccgggacc cgggcgcact tccaggttcg tctgcgcgcg
     1321 cgtgtgcacc gctgtcgcgc cgttcgacgg cggagcgcac acgcgcgctg cgaaggccgg
     1381 tgctgccgca agtgcgacgg cgagcgccgc cgccttgctc agaagctgaa gctgctgctg
     1441 cccgtacacg agccgctgta attcgtgtac gtgcaagaga aggagccgtt cgcggccgtg
     1501 atcgagagcg ttcccgtgcc gctgtcgatc gagccggtca ccgcgaaggt cttcgagtcg
     1561 atcgtcacga cgtaggtcca ctctccgctg gcgttgaaac aaccggagaa cttttccgac
     1621 aagctttcac cgtcgcacgc gagcgtcaga ttgtagttgc cgcagtacga aaacgacgac
     1681 ccgcccgccg tcgagaaata ccagttgccg ccgccgctga agcagcacgc cgcctcgtag
     1741 cagcagttat tgtagctcag cgtttcttgc acgttcgact gatcacccga cgcgttgacg
     1801 ctgtaggaac cgccgctcgg acaagcgacg gtctggctcg cgctcgagct cgactgcagg
     1861 cgaagccctg ccgcgctggt cgccgaaatt ttctcgtact cctgcgcgac gccgaccgca
     1921 gtcgtgttgt cgagcttgcc ggtcggatgg gcgatgctgc tcgagatggc attgaactgc
     1981 gccgccccgt tgcccttgtc ctcgtcgcca ccgccgcacc cggcagccgc cgcgcacacc
     2041 accacgagcc caaaaataga taccaccttc atactcgcgt tttaccaaac ttcgcggccg
     2101 aatagtgctg aacgttcttg gcgaaattgc ccggcgctcg tcttttcgcc cgctcgcggg
     2161 cccgcccgtg catgatcttg ctcgcgcacc cggagccccg tgctagctcg gcgccgtgat
     2221 gcgctcactc gcttgccttg gcttcttgct cggatgcacg cgtttcggcc ctgtctatcc
     2281 cgagcgaccg ccggcgcgtc cgtcggcgct cgtgcccgag cccgtgccgt cgcgcatctc
     2341 gctccacctg gcgatcacgg ggccgagcct ccgccaagcg ctcgacgggg tcgtgccggc
     2401 gagcggcgac ggcagcgtca gcgtgctcgg cagcgatcgc gcgtaccact ggcagcgcga
     2461 accgctcgac gttggtttcg cgggcgggcg cgtggcggct cgcaccaaag tgacggcgac
     2521 gatcgaccta ccgatcagca acctcgtggt cgcgttcgag ctgcacgtgt cggcagagcc
     2581 cgtgatcaac acgagctacg ccttcaagtt gcaggccacg gacgtgagcg tccactccga
     2641 cgacgcacgg ctcaaaatgc tcgaccaagt ggcgggcgtc ttcggccgcg tcggcagtga
     2701 agtggaggcg cgccttcgcg agttcaccta cgacttgaag ccgatgctcg aacaagccta
     2761 cgagcgcgtg cgcgcgccga tgcccttcgc gctcggcgac gcggccggct gcgccgtgct
     2821 caaggtcctc ggggtcgagg ccgcccccgt gatcctggcg gacggcgtcg agaaggattt
     2881 cgcgttcgtg gtcgctccct ccgtcaccat cccgtgcgcg cccgtggcgc tcgagccgct
     2941 gccgccgctc gaaaatgtcg cgaccgtgcc gaccgggccc ttcacggtga ccgtccccat
     3001 cgtcgccgct tacagcgagc tcacgcgcgg gctcggtgcc gccttcacga acggcaagct
     3061 cttcttctcc aaggagcatc cggacctcta cctcgaaaag ccggagctct acgaagcgga
     3121 cgatcgtctc gtgctgcact tgcacatcgc gggtcccgtg cacgagctcg ccatccacac
     3181 cgtcatcgac ggcgagcttt acctcaccgg tcatccga
//
LOCUS       DATIML010000844         2727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_758218, whole genome shotgun sequence.
ACCESSION   DATIML010000844 DATIML010000000
VERSION     DATIML010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2727
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758218"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="VLJ38_14660"
     CDS             <1..692
                     /locus_tag="VLJ38_14660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40818.1"
                     /translation="RATIAAPFDVLLVTHAWHDERLERCPALAADGRCSLHAEDKPLV
                     CALAPLDALAPDASQHAVLAARSREAAFWGAACIRAGEPDGFVPLVRRLTLVDPTARR
                     LLAQRRAVLALEKQHWGAGVFRLLEPELFGKPEALAKIPPAGYMSLSIAPVLVVLAAV
                     SDACRARCREYLDAQLALARRLGAPQVVRGHAALRDAFARPLDRYVAGHAPDGRIAAA
                     TEAWLGLEQAA"
     gene            689..2035
                     /locus_tag="VLJ38_14665"
     CDS             689..2035
                     /locus_tag="VLJ38_14665"
                     /inference="COORDINATES: protein motif:HMM:TIGR03942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0018209 - peptidyl-serine modification
                     [Evidence IEA];
                     GO_process: GO:0046500 - S-adenosylmethionine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HSU40819.1"
                     /translation="MKYSDAVVRAAERLNIRPEAVQTYLDAGRGERASGVERSFHTTV
                     KPIGALCNLDCTYCYYLSKEELLEQKTRRITGDILERFIVDYIAAQDAPEIVFTWHGG
                     EPTLMGLPFFERVVELQAKHLPPGRRISNDLQTNGTLLDDGWCRFLAKNGFLVGLSID
                     GPRELHDAYRPTKGNAPSFDKVIAGARLLVKHNVVYSALCTVNRKNAREPLAVYRFLR
                     DELGAKFIQFIPCVEPRGFERTAPGFQRDQELASADSPRARPGHPFSIVTEFSVDPDD
                     WGSFLAAIFDEWLAHDRGGVRINLFESMFDQLAGRPAHLCTQSPICGKNIALENDGRV
                     YSCDHFVYPEYELGKIGDRSLAEMMFSLRQLEFGLAKHNTLPSECRKCPYLKLCWGEC
                     PRTRLLKTRPGEGNLSYLCSGWKHFYAHAVPRAPRRPIADPRLVPAVALLRSRPAT"
     gene            2520..>2727
                     /locus_tag="VLJ38_14670"
     CDS             2520..>2727
                     /locus_tag="VLJ38_14670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40820.1"
                     /translation="MKSSVSLSALGISLVLNASPAFAQAAAPVEPVALPPPSPPAEPV
                     PGAAAPPPLAAPSAPAPLAPPAPPA"
BASE COUNT          440 a         1016 c          822 g          449 t
ORIGIN      
        1 aacgcgcgac gatcgcggcg cctttcgacg tactcctcgt cacgcacgcg tggcacgacg
       61 agcgactcga gcgctgcccc gcgctcgccg cggacggccg ctgctcgctc cacgccgaag
      121 acaagccgct cgtctgtgcg ctcgcgccgc tcgacgcgct cgcgccggac gcgtcgcagc
      181 acgccgtgct cgccgcgcgc tcgcgtgaag ccgctttttg gggcgcggcg tgcatccgag
      241 cgggcgagcc ggacggcttc gttccgctcg tgcgtcgcct caccctcgtc gatccgacgg
      301 cacgcaggtt gctcgctcag cgccgcgccg tcctcgcgct cgaaaagcag cactggggcg
      361 ccggcgtctt tcggctgctc gagcccgagc tcttcggcaa acccgaagcg ctcgcgaaaa
      421 tcccgcctgc cggttacatg tcgctgtcca tcgctcccgt gctcgtcgtg ctcgcggcgg
      481 tgtcggacgc ttgtcgggct cgctgccggg aatacctcga cgcacagctc gcgctcgcgc
      541 gacgactggg cgccccgcag gtcgtgcgcg gacacgcggc cttgcgcgac gcgttcgcga
      601 gaccgctcga tcgttacgtt gccggccacg ccccggacgg ccgtatcgcc gccgccacgg
      661 aagcgtggct cggattggag caggcagcat gaaatactcc gacgctgtcg tgcgcgccgc
      721 ggagcggctg aatatccgcc cggaagccgt ccaaacctac ctcgacgcag gccgcggcga
      781 gcgcgcctcc ggcgtcgaac gctcgttcca tacgacggtg aagcccatcg gcgcgctctg
      841 caatctcgac tgcacgtatt gctactacct gagcaaagag gagctcctcg aacagaagac
      901 gcgccgcatc acgggcgaca tcctcgagcg cttcatcgtc gattacatcg cggcgcagga
      961 cgcgccggag atcgtgttca cctggcacgg cggcgagccg acgctcatgg gcctgccgtt
     1021 cttcgaacgc gtcgtcgagc tccaggcaaa acacctgccg cccggccgcc gcatctcgaa
     1081 cgacctgcaa acgaacggca cgctgctcga cgacggctgg tgccggtttc tagccaaaaa
     1141 cggcttcctc gtcggcctca gcatcgacgg gccgcgcgag ctccacgacg cctaccggcc
     1201 caccaaaggt aacgcgccga gcttcgacaa agtcatcgcc ggcgcgcgcc tgctcgtgaa
     1261 gcacaacgtc gtctacagcg cgctctgcac ggtcaatcgc aaaaatgcac gcgagccgct
     1321 cgccgtttac cgcttcttgc gcgacgagct cggcgcaaag ttcatccaat tcattccctg
     1381 cgtcgagccg cgcggcttcg agcgcacggc gcccggcttc cagcgcgacc aagagctcgc
     1441 cagcgccgac agcccgcgcg cgcgccccgg ccaccccttc tcgatcgtca cggaattcag
     1501 cgtcgatccc gacgactggg gcagcttcct cgccgcgatt ttcgacgagt ggctcgcgca
     1561 cgatcgcggc ggcgtccgca tcaacctgtt cgaatccatg ttcgaccagc tcgcaggccg
     1621 ccccgcgcac ctctgcaccc aaagcccgat ttgcggcaag aacatcgcgc tcgaaaacga
     1681 cggccgcgtc tactcctgcg accacttcgt ctatcccgaa tacgagctcg ggaaaatcgg
     1741 cgaccgctcc ctcgccgaaa tgatgttttc gctccgccaa ctcgaattcg gccttgccaa
     1801 gcacaatacg ttgccgagcg aatgccgaaa gtgcccatac ctcaaactat gttggggcga
     1861 atgcccgcgc acgcgcctgc tcaaaacccg cccgggggaa ggcaacctca gctacctctg
     1921 cagcggctgg aaacacttct acgctcacgc cgtcccgcgc gctccgcgcc gtccgatcgc
     1981 tgacccacgc ttagtcccgg cggtggcgct cttgcgctcc cgaccagcaa cgtgagcgcg
     2041 ccgtgtgttc ttgttggatt gaggggcgac cgctgctgca cgccgaaatg acgcgggctc
     2101 gcgccgttcc acgccggaga cgacgacgcg acacgcttga ccgcatcgcg gaaacgctgc
     2161 ggaaaagagg atgacggtgc cgagcacgca cgaaatacga cggtcgagga agacgcgctc
     2221 cgcggcactc gctcgcgacc cctcggccgg cgtcagcgcg cgataacgag cgcgattcag
     2281 cgctcaccct tcggagtggg gcgcgtccgg agcggcgggc cgccgctcgc gtgacatttc
     2341 gcaagcgggt gcggcgggtt caattcgtcc atccaggttt cgctgcgacg agcttggttt
     2401 tccgccgtgt aaccacgatt gcggggtcgt ttccgaaaca ccgcccgaac atagccggtc
     2461 cggttttggg cggtctttca cattgtagag ctcgagccca aaagcgaaga ctcgatgtca
     2521 tgaagtcttc cgtttccttg tctgcactcg gcatctcgct cgtactcaat gcttcccctg
     2581 ccttcgcgca ggcggccgcg cccgtcgagc ctgtagcgct gcctccgccg tcaccgcctg
     2641 ccgagcctgt ccccggagct gccgcgccgc cgcccctcgc cgcaccctcg gcgccggcgc
     2701 cgcttgctcc gcccgcgccg cctgctc
//
LOCUS       DATIML010000845         1841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4802425, whole genome shotgun sequence.
ACCESSION   DATIML010000845 DATIML010000000
VERSION     DATIML010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4802425"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /locus_tag="VLJ38_14675"
     CDS             <1..696
                     /locus_tag="VLJ38_14675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40821.1"
                     /translation="NGLNLLLGGAYRVLPALEIEAMLPIAWAQYGGSASFGGQSQSRS
                     DGGFAVLNLHLGVNYLRAERPWRLKVGGALEWGPWTNNFGLTARTAVLATNAAYGGEH
                     LGLWAPEAFSIVAPARFEYGERLVVSGDAQLGLHVSTSGGDSELSIQLAPGVGYYATD
                     VVLVGLRLPFTWIPTESGSYSTFFAIEPYGRFDLGSIFLDTSFVLNIDEPYGFAFDSG
                     RFWALHFGGGASF"
     gene            complement(721..>1841)
                     /locus_tag="VLJ38_14680"
     CDS             complement(721..>1841)
                     /locus_tag="VLJ38_14680"
                     /inference="COORDINATES: protein motif:HMM:NF042530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HSU40822.1"
                     /translation="QALEHWPREGLPVSPAGWIVTTARRAALDRVRREASRAERQEES
                     IRLYGPDEPENLDEGPMLDDELRLMFTCCHPALAPSAQVALTLRLIAGLETREIARAF
                     LVPEATMAQRLVRAKNKIRDATIPYRIPPAEELPGRLRWVLAVIYFVFNEGYVASAGA
                     ELGRTDLVTEAVRLARHVVELMPKEHEAVGLLALLLLIEARRPARTAPDGTLVPLAEQ
                     DRSLWDAALSAQGQALVRRCLAANQPGPYQIQAAINAVHADARRAEETAWDQIVALYD
                     QLLVFTPTPVVALNRAVAVAELRSASEALGIVEELELDGYYLFHAVRADLLARAGRLA
                     EAASAYERAAALTANQAELRLIERRRAELLARARVLAH"
BASE COUNT          290 a          617 c          610 g          324 t
ORIGIN      
        1 aacgggttga acttgctcct cgggggcgcc tatcgcgtcc tgcccgctct cgaaatcgag
       61 gcgatgctac cgatcgcctg ggcgcagtac ggcgggtccg catcgtttgg aggccaatcc
      121 cagtccagga gcgacggtgg atttgcagtg ctcaatttgc acctcggcgt gaactacctg
      181 cgcgcagagc ggccgtggcg tctcaaggtg ggcggcgcgc tcgagtgggg tccgtggacc
      241 aacaacttcg ggctgacggc ccgcacggcc gttctcgcaa ccaatgccgc ctatgggggc
      301 gaacatctcg ggctttgggc gcccgaagcc ttcagcatcg tggcgccggc gcgcttcgag
      361 tacggcgagc gcttggtcgt cagcggcgac gctcagctcg gcctacacgt ttcgacgagc
      421 ggcggtgact cggagctctc gatccaactc gcacccggtg tcggttacta cgcgacggac
      481 gtcgtgctcg tcgggctgcg gctgccgttt acgtggatcc cgacggagag cggcagctac
      541 tcgaccttct tcgcgatcga gccgtacggc cgcttcgact tgggctcgat ctttctcgac
      601 acgagcttcg tgctcaacat cgacgagccc tacggcttcg cgttcgactc cggaagattc
      661 tgggcgcttc acttcggcgg cggtgcctcg ttctgaaccc gcgctcgacc tgcgcggcca
      721 tcaatgcgcg agcactcgcg cgcgcgccaa gagctccgca cgtcgccgct cgatcaatct
      781 gagctcggct tgattcgccg tcagcgcagc ggcgcgttcg tacgcgctcg ccgcctccgc
      841 aagccgtccc gcgcgcgcca gcaagtcggc gcgtaccgcg tgaaacaagt aatacccgtc
      901 gagctcgagc tcttcgacga tgcccagcgc ctcactcgcc gaacggagct cggccacggc
      961 aactgcgcga ttgagcgcca cgacgggcgt cggcgtgaac acgaggagct ggtcgtagag
     1021 cgcgacgatc tggtcccagg ccgtctcctc ggcgcgccgg gcgtcggcgt gcaccgcgtt
     1081 gatcgccgct tggatttgat aaggtcccgg ctggttcgcg gcgagacagc gccgtaccag
     1141 cgcctggcct tgcgcgctga gcgcggcatc ccagagtgaa cggtcttgtt cggcgagcgg
     1201 cacgagcgtt ccgtccggcg ccgtgcgcgc cggccttcgc gcctcgatca ggagcaagag
     1261 cgccaagaga ccgactgctt cgtgctcctt gggcatcagc tcgacgacgt gacgcgccag
     1321 ccgaacggcc tcagtcacga gatcggtgcg tccgagctcg gcgcccgcgg acgccacgta
     1381 accttcgttg aagacgaagt agatgaccgc gagcacccag cgtaaccgcc caggcagctc
     1441 ctcggcaggc gggatgcggt acggaatggt tgcgtcgcgg atcttatttt ttgcgcgcac
     1501 gaggcgctgc gccatggtcg cttcgggcac caagaacgca cgcgcaattt cgcgagtctc
     1561 gaggccggcg atcagccgca aggtcagcgc cacttgcgcg ctcggcgcga gcgccgggtg
     1621 acagcaagtg aacatgagtc ggagctcgtc atcgagcata ggaccctcgt cgaggttttc
     1681 gggttcgtct ggaccgtaga gccggatgct ctcttcttgg cgctcagcac gcgacgcttc
     1741 acggcgtacg cggtcgagcg cggcgcgacg tgccgtcgtg acgatccaac ccgcgggact
     1801 gacgggcaat ccttcacgcg gccagtgctc gagcgcctga a
//
LOCUS       DATIML010000846         4789 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2487651, whole genome shotgun sequence.
ACCESSION   DATIML010000846 DATIML010000000
VERSION     DATIML010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4789
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2487651"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..513
                     /locus_tag="VLJ38_14685"
     CDS             <1..513
                     /locus_tag="VLJ38_14685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40823.1"
                     /translation="SAMGALVAEGERIAEGLESSWRPEAASPAEARALDELIAGLPAA
                     LDALAAVPPATPARPVSAVAPVGHALAGERRRPSSTLSDCRKKGAAALSASAITRTGV
                     EASSSLKLQEGSMVRLALGSDADRIETWFNVLLCVPSDSGYRVEAELFSPPREIKERW
                     QAMFDRSAPL"
     gene            565..2304
                     /locus_tag="VLJ38_14690"
     CDS             565..2304
                     /locus_tag="VLJ38_14690"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSU40824.1"
                     /translation="MQDPRQISLELDEIATLLEFSGASRFRVNAFRRGAQIVNTLGDD
                     LGALVEQGRLEEFEGIGATLSRQIEELWNTGTSELLAQLRREQPEGVVELVQVEGLTP
                     RRIRALTGALGIRSVEELRDACLAGRVAKVPGFGPKTQERLLAAAERWLRRGEEAPEP
                     LILAAALRLAELVRSRLLRVAPRVELAGALRRGEELVHELEFVVAGEPERALSHLAGL
                     RQVLRVDTARRMAWLTDGVTLRLHVGGPEDFGSVLVEATGNPAHLLALRERARPRGFE
                     LAPSAAPAVGPEPAPALPERTFATETELYAALDCTLVPPELRQGTSELDQASRGDFSD
                     LLELGDILGMVHCHTVYSDGKNSVLEMAQGAHALGMKYITITDHSPSAHYARGVTLDR
                     LKEQWDEIAAVQEQVPIRILRGTESDILSDGQLDFPDAILERFDVVIASIHARHRMDR
                     DAMTKRIEHALSLPIYKIWGHALGRILNHRAPFDCDVPRVLDALAKAGGAVEINADPH
                     RLDLPPAWIPAVRERGLSLVVSVDAHSVRGLDVLGYGVTMARRGGVRKSETLNTRDAH
                     AFATAVRPVGGRS"
     gene            complement(2438..3811)
                     /locus_tag="VLJ38_14695"
     CDS             complement(2438..3811)
                     /locus_tag="VLJ38_14695"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HSU40825.1"
                     /translation="MVAEYLFSHALTLIALLASIVMVVQLLDSKRTPQSTYAWLLAII
                     FVPLVAIPLFLLLGRRKFPRNAKRPSGRLPLATTDDGGESPVARLLRKSGVAPARDGN
                     RFELLTTGEVAFARLLWLIENAERSLDMTMFILADDAVGLRVVEALAARARSGIQVRL
                     ILDAVGSSGVLPHATRVLGAAGAEVRTFMPLRHSPVRGRTNLRSHRKLLIADGEHVFA
                     GGMNVAGEYMGPPELKVAERWRDLAAVVSGPVAPDATALFESDWRYCHGNATTRVGSA
                     PSSRGNEVLQLVPSGPDMVADTMYDALLTAVFAARERIVLITPYFVPDDALEHALVLA
                     ARRGVHADVVVPLRSNHRLADVARRASLRELSAAGVSLHYHPQMVHAKAMVIDELCAF
                     IGSPNFDMRSLFLNYEDALFLYSPDAIAQVRDFADALRAECASERPHERSNWLLERVA
                     RLLAPEL"
     gene            3880..>4789
                     /locus_tag="VLJ38_14700"
     CDS             3880..>4789
                     /locus_tag="VLJ38_14700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSU40826.1"
                     /translation="MLARLVSFALVVALSCCALPGAAEEPAHPVAPSRGGRPEVTVPG
                     NPKPPSDELDYDTPRLEPAAFPLLGGDSDIGFEFGAVGTLTRFSGGTRPFVWNMDLLL
                     ATSVKQGPSGLEFTQQSYLWQIDVPHAFGSNVRLNPALSYSNTINQGYFGVGNASSAE
                     KPAVIYGEPKRYFQYDEREARLRGITRIGWHPPWEVAIATTFRYAAPQAYQGSKLAED
                     VAAGQVTGYRKMTLGVLGAGLIYDSRDNEYFPRRGAFHQIGVRGVQGLPFDAHVGYGA
                     VGAVLATYVPVGGPVVLAARGVIDAEF"
BASE COUNT          769 a         1633 c         1647 g          740 t
ORIGIN      
        1 agcgccatgg gcgcgctcgt cgccgaaggc gagcgcattg cggagggcct cgagagcagc
       61 tggcgacccg aagctgcttc gcccgccgag gcacgcgcgc tcgacgagct gattgccgga
      121 ctgccagcgg cgctcgatgc actcgccgcc gtcccgcccg caacgccggc acgccctgtt
      181 tcggccgtcg cgcccgtcgg acacgcgctc gcgggtgaac gtcgccgtcc gagctcgacc
      241 ctcagcgact gccgcaagaa aggcgcggcg gcgctgtcag ccagcgccat cacgcggacg
      301 ggtgtcgaag cctcgagctc cctcaaattg caggagggct cgatggtgcg gctcgcgctc
      361 ggcagcgatg cggaccgcat cgagacctgg ttcaacgtgc tgctctgcgt tccgagcgac
      421 tcggggtacc gcgtcgaagc cgagctcttc tcgccgccgc gcgaaatcaa ggagcgctgg
      481 caggcgatgt tcgaccgttc tgccccgctc tgatggccgt aggccgagcg ggcgcgcgcg
      541 agagaacgag cgcacacttg agcgatgcag gacccgcggc agatctcgct cgagctcgac
      601 gagatcgcca cgttgctcga gttttccggc gcgtcgcgct tccgcgtgaa cgccttccgg
      661 cgcggcgcac aaatcgtgaa cacgctcggc gacgacctcg gggcgctggt cgagcaaggg
      721 cgcttggaag agttcgaagg catcggcgcc accttgtcgc gccagatcga ggagctctgg
      781 aataccggaa cgtccgagct cctggcgcag ctccggcgcg agcagcccga aggcgtggtc
      841 gagctcgttc aggtggaggg gctcacgccg aggcgcattc gagcgctgac cggtgcgctc
      901 gggattcgct cggtcgagga gctgcgcgac gcgtgcctgg cgggtcgcgt cgccaaagtg
      961 ccgggattcg gcccgaaaac acaagagcgc ctgctcgcgg ctgccgagcg ctggctccgg
     1021 cgcggcgagg aggcgcccga gccgctcatc ctggctgcgg cgttgcggct ggccgagctc
     1081 gtgcgctcgc ggctgctccg cgtcgctccg cgtgtcgagc tggcgggggc gctgcgccgc
     1141 ggtgaggagc tcgtgcatga gctcgagttc gtcgtcgcgg gcgagcctga acgggcactg
     1201 tctcaccttg cggggctacg ccaagtgctg cgcgtggaca ctgccaggcg catggcgtgg
     1261 ctgacggacg gcgtcacctt gcgactgcac gtgggaggcc ccgaggactt cggctcggtg
     1321 ctcgtggaag cgacgggcaa ccccgcgcac ctcctcgccc tccgcgagcg ggcccgaccg
     1381 cgcgggttcg agctcgcccc gtcagcggcg cccgcagtcg gccccgagcc cgcgcccgcg
     1441 ctgcccgagc gcacgttcgc gaccgagacc gaactctacg ccgcgctcga ctgcacgctc
     1501 gtgccgcccg agctcagaca gggcacgagc gagctcgacc aagcgagccg cggtgatttc
     1561 tccgatttgc tcgagctcgg cgacatccta ggcatggtgc attgccacac cgtgtattcg
     1621 gacggcaaaa atagcgtgct cgagatggcc cagggcgcgc acgcgctcgg catgaagtac
     1681 atcacgatca ccgaccattc gccgagcgcg cactacgcgc gcggtgtcac gctcgatcgc
     1741 ctgaaggagc agtgggacga gatcgcggcc gtgcaggagc aggtaccgat taggatcttg
     1801 cgcggcaccg agtcggacat tctgagcgac ggtcagctgg attttcccga cgcgatcctc
     1861 gagcgcttcg acgtagtcat cgccagcatt cacgcgcgtc accgcatgga ccgcgacgcc
     1921 atgacgaagc gcatcgagca cgccttgtcc ctgccgattt acaaaatttg gggtcacgcg
     1981 ctcggccgca tcctgaacca ccgcgcgccg ttcgattgcg acgtgccgcg cgtgctcgac
     2041 gcgctcgcca aggcgggcgg cgccgtcgaa atcaacgccg acccgcaccg gctcgatctg
     2101 ccgcccgcct ggatccccgc tgtgcgcgag cgcgggctct cgctcgtcgt ctccgtcgac
     2161 gcccactccg tgcgcgggct cgacgtgctc ggctacggcg tcacgatggc gcgccgcggc
     2221 ggcgtgcgaa agagcgagac cctgaacacc cgcgacgccc acgccttcgc gaccgcggtg
     2281 cggccggtcg gggggaggag ttgaaccgcc aagacgccaa gaaacagagg gatgaacgcg
     2341 gaacggagct tgctgtcacg cgctaatgtc gcagctgctc ccaccctaat tccgatccaa
     2401 aaaccttggc gacttggcgg tttttctccg gcccggatca aagctcgggc gcgagtaggc
     2461 gcgccacgcg ctcgagcagc caattgctgc gttcgtgcgg gcgttcgctc gcgcactcgg
     2521 cgcggagcgc gtccgcgaaa tcacgcacct gcgcgatcgc gtcgggcgag tagagaaaga
     2581 gcgcgtcttc gtagttcaag aacagactgc gcatgtcgaa gttcggcgag ccgatgaaag
     2641 cgcagagctc gtctatgacc atcgctttcg cgtgcaccat ctgcgggtgg tagtggagcg
     2701 agacaccggc cgcggagagc tcgcgcaagg acgcgcggcg tgccacgtcg gccaagcgat
     2761 gattggagcg gagcggcacg accacgtccg cgtgaacacc gcgcctggcc gcgagcacga
     2821 gcgcgtgctc gagcgcgtcg tcgggcacga aatagggcgt gatgagcacg atgcgctcgc
     2881 gcgccgcaaa aacggccgta agcagcgcgt cgtacatcgt gtcggcgacc atgtccggcc
     2941 cgctcggaac gagctgcagc acctcgttcc cgcgactgct cggcgccgag cctacgcgcg
     3001 tcgtcgcgtt gccgtggcaa taccgccaat ccgactcgaa gagcgccgtg gcgtccggcg
     3061 cgacggggcc gctcacgacg gcggccagat cgcgccagcg ttcggcgact ttcagttcgg
     3121 gcgggcccat gtattcacca gcgacgttca tgccgcctgc gaagacgtgc tcgccgtcgg
     3181 cgatgagcag cttgcggtgg ctgcgtaaat tcgtgcgacc gcgcacgggc gagtgccgga
     3241 gcggcatgaa cgtgcgcacc tcggcgcccg cggcaccgag cacgcgcgtg gcatgcggga
     3301 gcacgcccga cgaccccacg gcgtcgagga tgagccgcac ctgaatgccc gaccgcgcgc
     3361 gcgccgcgag cgcttccacg acgcggagcc cgacggcgtc gtcggccagg atgaacatgg
     3421 tcatgtcgag cgagcgctcg gcgttctcga tcagccacaa gaggcgcgcg aaggctactt
     3481 cgcccgtggt caacagctcg aagcgattgc cgtcgcgtgc tggcgcgacg ccgctcttcc
     3541 ggagtagccg cgcgacgggc gactcgccgc cgtcgtccgt cgtcgcgagc ggcaagcgtc
     3601 cgctcggccg cttggcgttt cgcggaaatt tacgccgccc gagcagcaga aacagaggaa
     3661 ttgccacgag cggcacgaag atgatggcga gtagccatgc gtacgtgctt tgcggggtgc
     3721 gcttggagtc gagcagctgc accaccatga cgatcgacgc gaggagcgcg atcagcgtga
     3781 gcgcgtgtga aaaaaggtac tctgcgacca cgggcgaccg aacttcccgg gcagcttagc
     3841 ctgtgctttc gccacttgct tcgtggtacg gaaggggcgg tgcttgcccg gctcgtgagc
     3901 tttgcgctgg tggtcgcgct ctcgtgctgc gcgctgcccg gcgctgccga agagccggct
     3961 caccccgtcg cgccctcgcg cgggggacgg cccgaagtga cggtgcccgg caacccgaaa
     4021 ccgccgagcg acgagctcga ctacgatacg ccgcgtctcg agcccgccgc cttcccattg
     4081 ctcggcggtg acagtgacat cggcttcgag ttcggcgccg tcggcacgct cacgcgcttt
     4141 tcgggtggga cgcggccgtt cgtctggaac atggaccttt tgctcgcgac gagcgtcaag
     4201 cagggcccga gcggtctcga gttcacgcaa cagagctacc tctggcaaat cgacgtgccc
     4261 cacgcgttcg ggtccaacgt gcgcctgaac ccggcgctct cgtattcgaa taccatcaac
     4321 cagggctact tcggtgtcgg caacgcatcg tccgccgaaa agcccgccgt gatctacggc
     4381 gagccgaagc gctatttcca atacgacgaa cgtgaggcgc gcctgcgcgg gatcacgcgc
     4441 atcggttggc atccaccgtg ggaagttgcc atcgccacga cgttccgtta cgcggcgccg
     4501 caagcgtatc agggcagtaa gctcgccgaa gacgtcgctg ccggacaggt gacgggttat
     4561 cgcaagatga cgctcggcgt gctcggcgcg ggcctcatct acgattcccg cgacaacgag
     4621 tatttccctc ggcgcggcgc gtttcatcag atcggcgtgc gcggcgtgca gggcctgccg
     4681 ttcgacgctc acgtcggcta cggcgcggtc ggcgccgtac tcgccacgta cgtcccggtg
     4741 ggcggtcctg tcgtcctcgc ggcgcgcggc gtgatcgacg cggaattcg
//
LOCUS       DATIML010000847         5770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3354833, whole genome shotgun sequence.
ACCESSION   DATIML010000847 DATIML010000000
VERSION     DATIML010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5770
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3354833"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1198
                     /locus_tag="VLJ38_14705"
     CDS             <1..1198
                     /locus_tag="VLJ38_14705"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU40827.1"
                     /translation="VKPAEDAAAGEPASLLSVVLVTALGSVSGGVFWTGVFFVTREHY
                     RFSAAENLTLALVMGTGYALVARSAGAVSRRFERVGVRRLAALGFVAWALVASLPGFV
                     ASRLGMWLCAVLGAAIPGVIWPVMESYLGGGRHGPELRRGLGSYNLTWTCSTAVPLLA
                     FPWLTRLSPLGPLYLCTLTNLLALAALLGLPLKPAPSHAEHAQAAVGREYPALLRASS
                     WLLPVSYLLLSAVSPILPHRLSELGTPVPPALVAATWMVARFTSLGVMAALPYWHGRW
                     EALVLAGAALLIGVALTLLAATLPLVVLGLALFGAGLGITYFCSIYYALSVGHAAVDA
                     GGGFEALIGVGYMLGPLVGLSGQLMPSGFEERGTVLLAWAAALAGGAAAARPYFAARR
                     RRRDAR"
     gene            1276..1755
                     /locus_tag="VLJ38_14710"
     CDS             1276..1755
                     /locus_tag="VLJ38_14710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40828.1"
                     /translation="MPRLLFVLPLALTTWAGCLTSQSPSAKASDAARELNVTSRFGDS
                     TSVASMTSPSVRDQFLSRRAEWGKLIRVVDVELASFTMDDNEHATVMVDFSWTRVDQG
                     TLHGTRVRQEWSNTEGGEWLLTRERRDSGDIGLFGEPIAKIDPEPRPDVQFATRVIR"
     gene            complement(1784..1918)
                     /locus_tag="VLJ38_14715"
     CDS             complement(1784..1918)
                     /locus_tag="VLJ38_14715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40829.1"
                     /translation="MSRRKGQAKKKARLKRRAETARAGRVQKKPAGKKKAAASSAAQS
                     "
     gene            complement(2056..2220)
                     /locus_tag="VLJ38_14720"
     CDS             complement(2056..2220)
                     /locus_tag="VLJ38_14720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40830.1"
                     /translation="MIEFSDGMHEYVTTPVKRVLRLASRDIFYIETVNSRYRLEVRDR
                     ERALEDVSSG"
     gene            complement(2480..3361)
                     /locus_tag="VLJ38_14725"
     CDS             complement(2480..3361)
                     /locus_tag="VLJ38_14725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40831.1"
                     /translation="MNDFDARCLLVPSARVSACVLGAAFFVGSGYAHAEPTPAPATTP
                     AAATPAAAATTKPPAAAAPSPTAPPAHPTKPVVADEPPHPDDGRMGTHQEHWVVGIGL
                     RENFVASSGFDPFSTNNVLPQFSVNAGRVLFASGRLSLAALALFDYGSVKANARALDT
                     SLSVARVTAAAEGRYHFWRRFYLFGRVAPGALYSGATLSDPIAGGEQHSNSWAFATDL
                     SLGAAVEFAGEARGASNRPRGWIGLDGGYGWAQASKLAFTSSGSDANAPARLEPVDLG
                     ELAVRGGFFRVNGTITF"
     gene            complement(3354..4961)
                     /locus_tag="VLJ38_14730"
     CDS             complement(3354..4961)
                     /locus_tag="VLJ38_14730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40832.1"
                     /translation="MNKHWLCSLLLLGCGGRPEAWDAPFTPTAPVGLDNAVVVMDTTL
                     ARALVLTSPGALELREDVLPVGQHVVKAQASPDGKRLFVLSRGVWPRRNPSDEHPRLT
                     VIETDPAPRVVKTYEFDDPLSGLVVDSDNEWAVLYVTNDDSRTVTNPNEIFLLHLSEL
                     DRDPIPVTVQSLSGSPQSFSFTGTLHVPNGAPRRLLVVEMQNEVTLVDLLPALGDLER
                     TTSQVTIQMSLNQQGQNATPAEVVFHDADAASGIDPQLAVRLTGDTNVMLLPLVAPSS
                     SSTHPFSVVPNLVDVGGQASTVRFVNTDDGVRLVALVPSKLSAGLVDPSTGNVTSVTL
                     AKPFTGIALVTAELATDASATDIALLWSNTTPTIGLWDLGKATTAATHGIDTLQVGAS
                     VRDVLNVPGDAFPTSKILQGQSGDFYVLDLKARRSSPMATNGHTYQLTFAPDGQSRRL
                     WAFAPSQEDFSSVELGTLNPTELHADSPVWSVFDIAQSGGAGGRSAIVLHQTGGTLGA
                     TVLDAVAPDTANTRFYSGLAYGGLSHE"
     gene            complement(4961..>5770)
                     /locus_tag="VLJ38_14735"
     CDS             complement(4961..>5770)
                     /locus_tag="VLJ38_14735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40833.1"
                     /translation="VTPDGAYAVVRVDGQKTLGFVDLASGERQTLALADFVTDIDLSA
                     DGKQAFAVSGGALVVVPVPPGDVDPSTLPRASAPGETGRSVSLSPDASLALLYSNATT
                     DNYLGILTGGGDWSEYDARAVDLKAPVLAVFASPDAEHGIAFQATAKGSSKGGAFSIV
                     SAQTDRAPKIVGTDAAPNALAFAPDGQSAIITTRDLTKQRYGAYLVHLASLEQTFIPL
                     SSPPLATGMVPSANRAFVAQAHPEGRITFVNLDDGSQHTLTGFELGAKVTQ"
BASE COUNT          844 a         1905 c         2017 g         1004 t
ORIGIN      
        1 ggtcaagccg gctgaggacg ccgcagccgg ggagcctgca agcctcctct cggtcgtgct
       61 cgtcaccgcg ctcggctcgg tgagtggcgg ggtcttctgg acaggcgtct ttttcgttac
      121 ccgcgagcac taccgcttct ctgcggccga gaatctgacc ctcgcgctcg tgatgggcac
      181 gggctacgcg ctcgtggcgc gttcggccgg cgccgtcagt cgaagattcg agcgcgttgg
      241 ggtgcggcgg ctcgcggccc tcggtttcgt cgcctgggct ctggtggcat cgcttcccgg
      301 tttcgttgcc tcacgtctcg gcatgtggct ctgcgccgtg ctcggcgcgg ccatcccggg
      361 cgtcatctgg cccgtgatgg agagctacct cggcggcggc cgtcacggcc ccgagctccg
      421 gcgcggcctc ggtagctata acctcacctg gacgtgcagc accgcggtcc cactgctcgc
      481 ctttccgtgg ctcacgcggc tgagcccgct cggcccgctc tacctttgca cgctcacgaa
      541 cctcctcgcc ctcgccgcgc tgctggggct accgctaaag ccggcgccga gccacgccga
      601 acacgcgcag gccgccgtcg gccgcgaata tccggcgctg ctcagggctt cgagctggct
      661 cttgcccgtg agctacctgt tgctttcggc ggtctcgccg atcttgccgc atcggttgtc
      721 ggagctcggc acgcccgtgc cgcccgcgct cgtcgcggcc acctggatgg tcgcgcgttt
      781 cacgtcgctc ggcgtgatgg cagcgttacc gtattggcac ggacgctggg aggctctcgt
      841 cctggccggt gcggcgttgc tgattggcgt ggcgctcacg ctgcttgcgg cgacgttgcc
      901 gctcgtcgtc ctcggcctcg cgctcttcgg cgcgggtctc ggcatcactt atttttgctc
      961 gatctactac gcgctctcgg ttggccacgc cgcggtcgat gcgggtgggg gcttcgaggc
     1021 gctcatcggc gtgggctaca tgctgggccc cctggtcgga ctgtccggcc agctcatgcc
     1081 gagcggattc gaagagcggg gcaccgtgct cttggcttgg gcggcagcgc tcgcgggggg
     1141 tgcggcagcg gcgcggccct attttgccgc gcggcgccga cgtagagacg cccgttgagt
     1201 cgcatgctcg agcgacccgc ccaaacggcg ccgctttctt ttccacgagc gcgcgctctt
     1261 gttaggggtc gtcgcgtgcc gaggctgctc ttcgttctgc cgctcgcgct cacgacttgg
     1321 gccggctgcc tcacgtcgca gtccccgtcg gcgaaagcca gcgacgcggc gcgcgagctc
     1381 aacgtcacgt cgcgcttcgg tgactcgacc agcgtcgcca gcatgacctc gccgtcagtg
     1441 cgcgaccaat ttctgagccg gcgcgccgag tggggcaagc tcatccgcgt cgtcgacgtg
     1501 gagctagcaa gcttcacgat ggacgataac gagcacgcga cggtgatggt cgacttctcg
     1561 tggacgcgcg tcgatcaggg cacgttgcac ggcacgcgcg tgcgccagga gtggagcaat
     1621 acggagggcg gcgagtggct gctcacgcgt gaacgccgcg actcgggaga catcgggctc
     1681 ttcggcgagc cgattgcgaa gatcgatccc gagccgcgtc cagacgtgca attcgccacg
     1741 cgcgtgatcc gctgagcgga gcggtcgcgc gtcgagcggc cgttcagctc tgagcggcgg
     1801 agcttgcggc cgccttcttc ttgccggcgg gcttcttctg cacgcggccc gcgcgcgccg
     1861 tttcggctcg gcgcttgagg cgagccttct tctttgcctg gcctttgcgg cgagacatct
     1921 tctgcgaatt acgtgagtcg aactttccca tggcgattcg gcgcggaacc tatcaccgac
     1981 ttcgggccga aggccagcgc ccgcgcgggt cgcgtcagcg tgccggcgcc gggcgcccgc
     2041 tgcgcgtcgt tcggttcagc cgctcgaaac gtcctcgaga gcgcgttcgc gatcgcgaac
     2101 ctcgaggcgg taacgactgt tgacggtctc gatatagaag atgtcgcgcg acgcgagccg
     2161 aagcacgcgc ttgacgggtg tcgtcacgta ttcgtgcatc ccgtccgaaa actcgatcac
     2221 tacgaccgaa ccgcgcctgg gagccctgac gaggcgtcca gctacggctc gtgatccgcg
     2281 cccgagcttt ctaagcacga cctgcacgtt catcagtcta gcaaggtcct ttgaggagtc
     2341 caccgggacg cgaggcatgc gattcaccca ggcctcccat ggctacggtc accatgcccc
     2401 gcatctgtag ccccgcgcga ataaattccc gaacttccag cgaggcctac actggtgccg
     2461 tgggtagggg aaagggccgt caaaacgtga tcgtcccgtt cacgcggaag aatccaccac
     2521 gcacggcgag ctcgcccagg tccacgggtt cgaggcgtgc aggtgcgttc gcgtcgcttc
     2581 ccgagctcgt gaaggcgagt ttcgacgctt gcgcccagcc gtagccgccg tccaagccga
     2641 tccagccgcg cggtcgattg gaggcgccgc gtgcctcacc cgcgaactcg acggcggcgc
     2701 cgagcgacaa gtccgtcgcg aaggcccagc tgttcgagtg ctgctcgccc ccggcgatgg
     2761 ggtcggagag cgtcgccccg gaatagagcg cgccgggtgc gacgcgaccg aacaggtaaa
     2821 agcgacgcca aaaatgatag cgaccctcgg cggccgccgt gacccgcgcg acgctgaggg
     2881 acgtgtccag agcacgcgcg ttcgctttca ccgagccgta atcgaagagc gcgagcgccg
     2941 cgagcgacag ccgaccgctc gcgaagagga cgcgaccggc gttgaccgaa aactggggga
     3001 gcacgttgtt cgtgctgaac ggatcgaacc ccgagctggc gacgaaattt tcccgtagcc
     3061 cgatgccgac gacccagtgc tcttggtggg tccccatgcg gccgtcgtcc gggtgcggcg
     3121 gctcgtccgc cacgaccggc ttagtcgggt gtgctggcgg agccgtgggg ctcggcgcag
     3181 ccgcggcagg cggcttggtc gtcgcggccg cagccggtgt ggccgcagcc ggtgtagtcg
     3241 cgggagcggg cgtgggttcg gcgtgcgcgt agccgctccc gacgaagaac gccgcgccaa
     3301 gcacgcacgc gctgacgcga gctgacggca ccagcaggca acgagcgtcg aagtcattca
     3361 tggctgagcc ctccgtaggc aaggccgctg taaaaacgcg tgttcgccgt gtcgggtgcg
     3421 acggcgtcga gcaccgtggc gccaagtgtg ccgcccgtct gatgcagcac gatggcggag
     3481 cgtccgcccg ccccgccgct ctgcgcgatg tcgaagacgc tccacacggg gctgtcagcg
     3541 tggagttcgg ttgggttcaa cgtgccgagc tcgacgctcg aaaagtcttc ctggctcggt
     3601 gcaaacgccc agagcctgcg gctctgtccg tcgggcgcga aggtcagctg gtaggtgtgt
     3661 ccgttcgtcg ccatgggcga gctccggcga gccttgagat cgagcacgta aaaatcgccg
     3721 ctctggcctt ggaggatttt ggaggtcggg aacgcgtcac ccggcacgtt gagcacgtca
     3781 cgcacgcttg cgccgacctg gagtgtgtcg atgccgtgcg tggcggcagt cgtggctttg
     3841 ccgaggtccc agaggccgat cgtcggggtg gtgttgctcc agagcagcgc gatatcggtg
     3901 gcgctcgcgt cggtggctag ctcggcggta acgagggcga tgccggtgaa gggcttcgcg
     3961 agcgtgacgc tcgtcacgtt gcccgtgctc ggatcgacga ggccggcgct cagcttcgac
     4021 ggaacgagag cgaccaaacg aacgccgtcg tccgtattga cgaagcggac ggtcgaggct
     4081 tgcccgccca catcgaccag attcgggacg acgctgaacg ggtgcgtcga gctgctgctc
     4141 ggcgccacca gcggcaacag catcacgttc gtgtcgcccg tgaggcggac ggcgagctgc
     4201 gggtcgattc cgcttgccgc atcggcgtcg tggaacacga cctcggcggg cgtcgcgttc
     4261 tggccctgct ggttgagcga catttggatc gtgacttggc tcgtcgtgcg ttcgaggtcc
     4321 ccgagcgcgg gcagcaaatc gacgagcgtc acttcgttct gcatctcgac cacgagcagc
     4381 cggcgcggcg cgccgttcgg cacgtgcagc gtacccgtga acgagaagct ctgcggcgac
     4441 ccgctcaggc tctgcacggt cacggggatc ggatcccggt cgagctcgct cagatggagc
     4501 aggaagatct cgttggggtt cgtcaccgtg cggctgtcgt cgttcgtgac gtacaagacg
     4561 gcccactcgt tgtcgctgtc cacgacgagt ccgctcagcg ggtcgtcgaa ttcgtacgtc
     4621 ttcacgacgc gcggcgcggg atcggtctcg atcaccgtga ggcgcgggtg ttcgtcgctc
     4681 ggattgcggc gcggccagac gccgcgcgag agcacgaaca ggcgcttgcc gtccggcgag
     4741 gcctgcgctt tcacgacgtg ctgcccgacg ggaagcacgt cctcgcggag ctcgagcgcg
     4801 cccggcgacg tgagcaccag ggcacgggcg agcgtcgtat ccatgacgac gaccgcgttg
     4861 tcgagaccca cgggcgccgt gggggtgaac ggcgcgtccc aggcttcggg acgaccgccg
     4921 caccccaaga gtaagagcga gcaaagccaa tgcttgttca tcactgtgtc accttcgctc
     4981 cgagctcgaa gcccgtgagg gtgtgctgtg agccatcgtc gagattgacg aaagtaatgc
     5041 gaccttccgg gtgggcctga gcgacgaagg cgcggttggc gctcggtacc atgccggtcg
     5101 cgagcggcgg gctcgagagt ggaatgaacg tctgctcgag gctcgcgaga tgcaccaaat
     5161 acgcgccgta acgctgcttg gtcagatcac gtgtcgtgat gatggcgctc tgcccgtcgg
     5221 gcgcgaacgc gagcgcgttc ggagcggcgt cggtgcccac gatcttcggc gcgcggtcgg
     5281 tttgcgcgga cacgatgctg aacgcgccgc ccttgctgct gcccttggcc gtcgcctgaa
     5341 acgcgatgcc gtgctcggcg tcgggggacg cgaacaccgc caagacgggc gccttgagat
     5401 ccacggcgcg cgcgtcgtac tcggaccagt cgccgccgcc cgtgaggatg ccgaggtagt
     5461 tgtccgtcgt cgcgttgctg taaaggagcg cgagcgaggc gtcgggcgag agcgacacgc
     5521 tgcggccggt ttcacccggc gcggaagcgc gtggcagcgt gctcggatcg acgtcacccg
     5581 gcggcaccgg cacgaccacg agcgcgccgc cagacactgc gaacgcttgc ttgccgtcgg
     5641 cggaaaggtc gatgtccgtc acgaaatcag cgagcgcgag cgtctggcgc tcgccgctcg
     5701 cgagatcgac gaagccgagc gtcttttggc cgtcgacgcg cacgacggcg taggcgccgt
     5761 ccggcgtcac
//
LOCUS       DATIML010000848         3165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1626137, whole genome shotgun sequence.
ACCESSION   DATIML010000848 DATIML010000000
VERSION     DATIML010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626137"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..371
                     /locus_tag="VLJ38_14740"
     CDS             <1..371
                     /locus_tag="VLJ38_14740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40834.1"
                     /translation="PRVVELPTTDVVGIVLAAVREATRGGSALIVLTRRAGVGIGGAL
                     GGESTRAGVAKQVHAVDVSAAPGCENIEVCALVAEHGTYAFVGRAEGHSVRAVHAADP
                     LLADLLIQRLAQVSGARFGD"
     gene            371..1735
                     /locus_tag="VLJ38_14745"
     CDS             371..1735
                     /locus_tag="VLJ38_14745"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HSU40835.1"
                     /translation="MARVVLLIEPDVDELGVLASKLRAHGLEVAIADSLERAAERASG
                     TRIGVMLVSSVLADAADFQPTLQATPSLANLPRFVLVDGIGMRGEAEVPRWDAEAIAK
                     RVHALGHSVPVAAAGGDFRGDLKQVSVADLLQLLGANRRSGTLSIATPTGAGEVRLGE
                     GDVLDAVYRRVDGEKALMRLLGQTEGSFAFAGGSAPTLRRIERSSQALLMDGMRQLDE
                     TKKLEDALALGSDALLAAVLARPDQRDIEQRVLEVLVTPHTLAELLDEVPALDLEVLN
                     ALAGLLTLGAVRRFAGGTLRIELADPERLTVLAALAQRAAPPGFEGMPRIGLAGSQRV
                     LATVLSSLGRLSDASVVTDVPAAPTPHPLGTLRLTESVSLELVGVPLIDAFAPLWGLV
                     LPGLLAVARLDDEPFETLEAGCRLASVPLVDGEPFLGDGGEADPERVAALVRATLERA
                     AGGE"
     gene            1737..2240
                     /locus_tag="VLJ38_14750"
     CDS             1737..2240
                     /locus_tag="VLJ38_14750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40836.1"
                     /translation="MKSGIKLGAAVAALVAFAWAAPARADEMIIKNPGLHPNYVFEAE
                     PHFLVDPYVDFAPGVGFRGTVSLLHNGFVQTINNSIGITFGLDWVDKGVWIPVAMQWN
                     FWLSRHWSVFGEPGVTFRAADDGHRGDHVAWLGLWAGGRYHFTDRVTLTLRVGSPTLS
                     VGVSFLL"
     gene            2309..>3165
                     /locus_tag="VLJ38_14755"
     CDS             2309..>3165
                     /locus_tag="VLJ38_14755"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSU40837.1"
                     /translation="MPPEPKPREEEARLTGARADFAASLPRRLETLRGALAAAEQVPD
                     DADRVKSLLRRVHAVCSAARVLGFASVAEALAEAERSVRTATASGRPLPFEEVSRAFD
                     VLPSLVLGAPISARTPETGGGAPAWPTSVLLLGSQALADAIAEPDRVPPVECERLSDA
                     SRLVELAHIVGPDVIVVDGDHEGAREAVTKFFADELIEPTPVVVVGSFAPAEAAAAFV
                     ELGVARVLPKPCSPDSLRRTIEELRERATRPRGAREPLGDMSVAGLTERIAAEFKRGL
                     VEALESGAP"
BASE COUNT          414 a         1062 c         1190 g          499 t
ORIGIN      
        1 cgccgcgcgt ggtcgagctg ccgacgacgg acgtcgtggg catcgtgctc gccgcggtgc
       61 gcgaggcgac gcgaggcggc tcggcgctca tcgtgctcac acgccgcgcc ggtgtcggca
      121 tcggcggcgc gctcggcggc gaatcgacgc gtgcaggggt cgccaagcag gtgcatgccg
      181 ttgacgtgag cgccgcgccc ggctgcgaaa acatcgaggt ttgtgcgctc gtcgccgagc
      241 acggcacgta cgctttcgtg gggcgcgccg aagggcattc ggtgcgcgcc gtgcacgcgg
      301 ccgatccgtt gctcgcggac ctgttgattc aacgcctggc gcaggtatcg ggcgcgaggt
      361 tcggcgactg atggcgcgcg tcgtcttact gatcgagccg gacgtggacg agctcggcgt
      421 gcttgcgtcg aagctccgcg cgcacggact cgaagtggcc atcgccgaca gcttggagcg
      481 cgccgccgag cgcgcgtcag ggacgcgcat cggcgtgatg ctcgtctcga gcgtcctcgc
      541 cgatgccgcg gacttccagc cgacgctgca ggcgacgccg agcctcgcga acctgccgcg
      601 cttcgtgctc gtggacggca tcggcatgcg cggcgaggcc gaggtgccgc gctgggacgc
      661 ggaagcgatc gccaagcgcg tgcacgcgct cgggcactcg gtgccggtcg cggcggcggg
      721 cggcgatttc cgcggtgatt tgaagcaggt gagcgtcgcc gatctcttgc agctgctcgg
      781 cgcgaaccgc aggagcggga cgctgtcgat cgcgacgccc accggcgcgg gcgaagtgcg
      841 gctcggtgaa ggcgacgtgc tcgacgccgt gtaccgccgc gtcgacggcg agaaggcgct
      901 catgcggctg ctcggccaga cggagggttc gttcgcgttc gcgggcggtt cggcgccgac
      961 gctccgccgc atcgaacgtt cgtcgcaggc gctgttgatg gacggcatgc gccagctcga
     1021 cgagacgaag aagctcgagg atgcgcttgc gctcggcagt gacgcgctgc tcgccgccgt
     1081 gctcgcgcgc cccgaccaac gcgacatcga gcagcgcgtg ctcgaggtgc tcgtgacgcc
     1141 gcacacgctc gcggagctgc tcgacgaggt gcccgcgctc gatctcgagg tcttgaacgc
     1201 cctcgcgggg ctgctcacgc tcggcgccgt gcggcgattt gcgggcggaa ccctgcgcat
     1261 cgagctggcc gaccccgagc ggctgacggt gctcgccgcc ctggcccagc gcgcggctcc
     1321 gcccggcttc gagggcatgc cgcgcatcgg cctcgcgggg tcgcagcgcg tactagcgac
     1381 cgtgctgtcg tcgctcggac gcctgagtga cgcgagcgtg gtgaccgacg tgccggcggc
     1441 gccgacgccg cacccactcg gtacgctgcg gctcaccgag agcgtatcgc tcgagctcgt
     1501 gggcgtgccg ctcatcgatg cgttcgcgcc gctctgggga ctcgtgttgc ccggtttgct
     1561 cgccgtggcg cgactcgacg acgagccgtt cgagacgctc gaggcgggct gtcggcttgc
     1621 ttcggtgccg ctcgtcgacg gcgagccatt tctcggcgac ggcggcgagg ccgatccaga
     1681 acgcgtcgcg gcgctcgtcc gcgcgacgct cgagcgtgcg gcaggaggcg aatgagatga
     1741 aatcgggcat taaactaggt gcggccgtag cggcgctcgt cgcgttcgcg tgggcggcgc
     1801 ccgcgcgcgc cgacgagatg atcatcaaaa atccggggct gcacccgaat tacgtgttcg
     1861 aggcggagcc ccacttcctc gtcgatccgt acgtcgattt cgcgcccggc gtcggctttc
     1921 gcggcacggt gagtttgctc cacaacgggt tcgttcagac catcaacaac agcatcggca
     1981 tcaccttcgg tctcgactgg gtcgacaagg gcgtttggat tccggtggcc atgcagtgga
     2041 acttttggct gagccgccac tggtccgtgt tcggcgagcc gggggtcacg ttccgcgccg
     2101 ccgatgacgg ccatcgcggc gatcacgtgg cctggctcgg tctatgggcg ggcgggcgct
     2161 atcacttcac cgatcgcgtc acgctcaccc tccgggtcgg tagtccgacg cttagcgtgg
     2221 gcgtctcctt cctgctctga ggacgggtag agcggccgct gccgcggaaa tctggctcga
     2281 ttagcgagtg gtatgctacg gccggaggat gcccccggag ccgaaaccgc gtgaggaaga
     2341 ggcccgactc accggagcgc gggccgattt tgcggcgagc ctgccgcggc ggctggagac
     2401 cttgcgtggc gcgctcgcgg cggccgagca ggtgcccgac gacgccgatc gggtgaagag
     2461 cttgctccgg cgcgtgcacg cggtctgtag cgcggcgcgg gtgctcggct tcgcgagcgt
     2521 cgccgaggcg ctcgccgagg cggagcggag cgtgcgtacg gcgacggcct cgggtcgtcc
     2581 gctgccgttc gaggaggtgt cgcgggcgtt cgacgtgctc ccctcgctcg tgctcggcgc
     2641 gccgatttcg gcgcgaacac cggagacggg cggcggggca cccgcttggc cgacgagtgt
     2701 gctcctgctc ggctcgcaag cgctcgccga cgcgatcgcg gagccggacc gcgtgccgcc
     2761 cgtcgagtgc gaacgcctga gcgacgcgtc gcggctcgtc gagctcgcgc acatcgtggg
     2821 gccggacgtg atcgtggtcg acggtgatca cgagggcgcg cgcgaggccg tcaccaagtt
     2881 cttcgccgac gagctcatcg agccgacgcc ggtcgtcgtc gtcggcagct ttgcgccggc
     2941 agaagcagcg gcggcgttcg tcgagctcgg cgtggcacgc gtgcttccca agccgtgcag
     3001 ccccgacagt ttgcgccgca cgatcgagga gctgcgcgag cgggcgacgc gaccccgcgg
     3061 cgcgcgcgag ccgctcggcg acatgagcgt cgcaggcctc acggagcgga tcgcggccga
     3121 attcaagcgc ggtttggtcg aagcgctcga gtcgggcgcg ccgaa
//
LOCUS       DATIML010000849         2785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1339155, whole genome shotgun sequence.
ACCESSION   DATIML010000849 DATIML010000000
VERSION     DATIML010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1339155"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1276
                     /locus_tag="VLJ38_14760"
     CDS             <1..1276
                     /locus_tag="VLJ38_14760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40838.1"
                     /translation="LRGVRHSAVWLLGLVPLGFATACASSGAVNAALKSDLGTLRQSI
                     RDEQRTGALDQSRAKKIARAVAEREVYAGSGPGAVARIRSLRACSSPMLPALEARADK
                     QDEAAAEATLVLLAAHELSPDALASRYEDADSGAWRAVAARASVAPERFARRRRYYVD
                     PDQRVRRAALEAAVEAPASLDEAALLEAARLDPDAMCRSLATRAVGAIGGEHAVRSLV
                     DLWDRADEDDRLNLVEAFGDRRSFKTGGKSELLRIADSEHGVPAVAARGELARLDESS
                     AAAMTNLLARDITDGSADEQELAIEMAPLEGPVVQALKTATRDADPTVRVAALDRLLE
                     VPTERARALAELRTESKTDTTGAARAALARAHDASVQPALVKELGAPGWQERKDAGVS
                     LISLGDYTHAATLLADDDANVRVAIACSMLGG"
     gene            complement(1307..2737)
                     /locus_tag="VLJ38_14765"
     CDS             complement(1307..2737)
                     /locus_tag="VLJ38_14765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSU40839.1"
                     /translation="MELTATASKANVVTSGSPYGVVLRLALPTVLAMLAQSAVNEMDI
                     IFLSWLPQPESSNAQAALLPSFILLWMFGGSLSAISVGTQTIAARRFAQNKPHDAGAV
                     LLNSMLFAFGSSVLLTAVAYAFLPHMLGLLIKVPEVRASAERYLSWRLLGVISMVTTF
                     SLKAFFDGIGKTYVHMVASVVMNVLNVALCLILIFGRFGAPRLGIAGAGVAGFISSWL
                     GLFICFGWVLLPRYRRAHRPFQMSALSRSLTGDILRLSVPSAVATLAVMTGFALFSMI
                     VSQLDHGVSVGAPPLVRHSEAVNSAATTVIVGILKLTFTACLAFGTSTATLVSQSLGE
                     GKPEKAERFGWVSVSLGLMIFGVVGLCEGGLFTHAILGLVTRSHAVAHAALVPLRMMG
                     FATPLIATGMILTQALFGAGNTRFVMIAELCLHFCCLVPLAWLLGIKLHWGLVGIWSA
                     ALTYVVLLTTAMVLKFRSGDWKSIKI"
BASE COUNT          508 a          963 c          942 g          372 t
ORIGIN      
        1 tcttcgcggc gtgcgtcact ccgccgtctg gctgctcggt ctcgttccgc tcggtttcgc
       61 gacggcttgc gcctcgagcg gcgccgtgaa cgccgcgctg aagtccgatc tcgggacctt
      121 gcgccagagc atccgtgacg aacagcgcac cggcgcgctc gatcagagcc gcgccaagaa
      181 gatcgcgcgc gccgtcgccg agcgcgaggt ctacgccggc agcggtcccg gcgccgtggc
      241 tcgcatccgc agcctacgcg cctgcagctc gcccatgctg cccgcactcg aggcgcgggc
      301 cgacaagcaa gacgaagccg ccgccgaagc cacgctcgtc ctgctcgccg cgcacgagct
      361 ttcgccggat gcgctcgcga gccgttacga ggacgccgac agcggggcat ggcgcgcggt
      421 cgcggcgcgc gcgtcggtcg ctccggagcg cttcgcgcgg cgccgtcgtt actacgtcga
      481 tcccgatcag cgcgtgcggc gcgcggcgct cgaggccgcc gtggaggctc ccgcttcgct
      541 cgacgaagcg gcgttgctcg aagccgcgcg gctcgatccg gacgccatgt gccgcagcct
      601 cgccacgcgc gccgtcggag ccatcggcgg cgagcacgcc gtccgctcgc tcgtcgacct
      661 gtgggatcgc gccgacgaag acgaccggct caacctcgtc gaggcgttcg gcgatcgacg
      721 ctcgttcaag acgggcggca agagcgagct cttacgcatc gccgactccg agcacggcgt
      781 gcctgccgtc gccgcgcgcg gcgagctcgc gcgcctggac gagagcagcg ccgcggccat
      841 gaccaacctg ctcgcgcgcg acatcacgga cggcagcgcc gacgagcagg agctcgcgat
      901 cgagatggct ccgctcgaag gtcccgtcgt gcaggcgctc aagaccgcga cgcgcgacgc
      961 cgatccgacg gtgcgcgtcg ccgcgctcga ccgcttgctc gaggtgccga cggagcgcgc
     1021 tcgagcgctc gcggaactgc gcaccgaatc caaaacggac acgacgggcg cggcgcgcgc
     1081 ggcactcgcg cgggcccatg atgcgagtgt tcagccggcg ctcgtcaaag agctcggcgc
     1141 gcccggttgg caggagcgaa aagacgcggg tgtgtcgctg atttcgctcg gcgactacac
     1201 ccacgccgcg accctgctcg ccgacgacga cgccaacgtc cgtgtcgcga tcgcgtgcag
     1261 catgctcggc ggctgagtcg cgggtcgact cgagcagtct cgaagactag atcttgatgc
     1321 tcttccagtc gcccgagcga aacttgagca ccatggcggt cgtcagcagc acgacgtaag
     1381 tgagcgccgc gctccagatg ccgacgaggc cccaatgcag cttgatgccg agcagccacg
     1441 cgagcggcac gaggcagcag aagtgcaggc acagctccgc gatcatgacg aagcgcgtgt
     1501 tgccggcgcc gaagagcgcc tgggtgagga tcatgcccgt cgcgatcagc ggcgtcgcaa
     1561 accccatcat gcgcaacggc acgagcgccg cgtgagccac cgcgtggctg cgcgtgacga
     1621 gtcccaagat cgcgtgcgtg aacaggccgc cctcgcacaa accgacgacg ccgaagatca
     1681 tgaggccgag cgagaccgat acccagccga agcgctccgc cttttcgggc ttaccttccc
     1741 cgagcgattg gctcacgagc gtagcggtcg aagttccgaa ggcgagacac gccgtgaacg
     1801 tgagcttcag gatgcccacg atgaccgtcg tggccgcgct gttcacggct tcgctgtggc
     1861 ggacgagcgg cggggctccg acggagacac cgtgatcgag ctggcttacg atcatcgaga
     1921 agagcgcgaa accagtcatc acggccaacg tggcgaccgc gctcgggacg gagagccgaa
     1981 gaatgtcgcc ggtgagcgag cgtgagaggg cactcatctg gaagggccgg tgcgcccgcc
     2041 gatagcgcgg caagagcacc cacccgaagc agatgaacag gccaagccag ctcgagatga
     2101 accccgccac gccagcgccc gcgatcccga gccggggcgc gccgaaccgg ccgaagatga
     2161 ggatgaggca gagcgccacg ttgagcacgt tcatcacgac actcgcgacc atgtggacgt
     2221 aggtcttgcc gatgccgtcg aaaaacgcct tcagcgagaa ggtcgtcacc atcgagatca
     2281 cgccgagcaa acgccacgac aagtaacgct ccgccgacgc ccgcacctcg ggcaccttga
     2341 tcaagagacc gagcatgtgc ggcaggaagg cgtaggcgac cgcggtcaag agcacgctcg
     2401 agccgaacgc gaacagcatc gagttcaaca aaactgcacc cgcgtcgtgc ggcttgtttt
     2461 gcgcgaagcg ccgcgcggcg atggtctgcg tacccacgga gatcgccgag agcgagccgc
     2521 cgaacatcca gagcaaaatg aaagacggca ggagcgccgc ctgagcgttc gacgactccg
     2581 gctgcggcag ccacgagagg aagatgatgt ccatctcgtt cacggcgctc tgcgcgagca
     2641 tcgcgagcac cgtcggtaac gcgagccgca gcacgactcc gtacggggag ccactcgtga
     2701 cgacgttggc cttcgaggcg gtggccgtaa gttccatgcg tgcggctcgc tttcctacta
     2761 ccttgcggca gcgagtgcac gacga
//
LOCUS       DATIML010000850         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1339508, whole genome shotgun sequence.
ACCESSION   DATIML010000850 DATIML010000000
VERSION     DATIML010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1339508"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VLJ38_14770"
     CDS             complement(<1..180)
                     /locus_tag="VLJ38_14770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HSU40840.1"
                     /translation="MGDETKAFEELEQRDRAALLGGGAARIERQHQAGKLTARERIER
                     LLDPGSFVEIGRFVAH"
     gene            283..370
                     /gene="ffs"
                     /locus_tag="VLJ38_14775"
     ncRNA           283..370
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VLJ38_14775"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(439..1125)
                     /locus_tag="VLJ38_14780"
     CDS             complement(439..1125)
                     /locus_tag="VLJ38_14780"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU40841.1"
                     /translation="MRLAVVTGASRGIGRATALELAHRGLSLALVGRPSAEQDETVEL
                     ARRRGSPQVRAFGCDLSDAFATQELGAELVRQLPAPEVIVHNAAVAPRSTIEETPTAV
                     WQETLLVNLTAPFLLTRAFLPSMRREGCGRIVFVGSISSTLGTARQSAYVASKWGVVG
                     FMKSLAEELRDSGLVTVAVLPGSTATRMLEGSGFEARMSAEDVAKTIVHYALDAPAAH
                     NGAAIEMFGV"
     gene            complement(1122..>1569)
                     /locus_tag="VLJ38_14785"
     CDS             complement(1122..>1569)
                     /locus_tag="VLJ38_14785"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:NF013398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HSU40842.1"
                     /translation="ELLSGYAVDRRALIEQGSTLAQTPAGIVALREVSVATVCPHHLM
                     PGLGRANVVYRPGARVLGLGAIARLVDACARRLVLQETIAEDVVASLIELAGARGAYC
                     EVTLVHGCLSARGACQTNARATSIVRRGELSESEVLLSLGLGGRPA"
BASE COUNT          260 a          573 c          529 g          207 t
ORIGIN      
        1 gtgcgcgacg aaacggccga tctcgacgaa gctgccggga tcgagcagcc gttcgatgcg
       61 ctcgcgtgcg gtgagcttgc ccgcctgatg ctgacgctcg atgcgcgccg cgccgccgcc
      121 caggagcgcg gcccggtctc gctgctcgag ctcctcgaac gccttggtct cgtcgcccat
      181 ggcctcaaac tataggccgg cgttccgacc aggcgtgcca cggcgtaaaa cggccgccct
      241 caccaaagtg ctcgcgcggg gcccgggagg tgataaacag cgggcgggtc cgccaacagc
      301 gcagcttgaa ccccgccagg cccggaaggg agcaacggta gagaaaagcg ggtgtggcgg
      361 gccctccgaa attttttggg gcgcgtggca cggcgccgtc acacgacgtg aacgcgacgc
      421 gcggcggcgt cgccggcctc aaacgccgaa catttcgatc gccgcgccgt tgtgcgcggc
      481 gggcgcgtcg agcgcgtaat gcacgatggt cttcgcgacg tcttcggcgc tcatgcgcgc
      541 ctcgaacccg ctgccttcga gcatgcgcgt cgccgtcgat cccggcagca ccgccaccgt
      601 cacgagcccg ctgtcgcgca gctcctcggc gaggctcttc atgaagccga cgacccccca
      661 cttcgacgcg acgtacgccg attggcgcgc cgtgccgagc gtcgaggaaa tgctcccgac
      721 gaagacgata cgaccgcacc cctcgcggcg catgctcggc aaaaacgcgc gcgtgagtag
      781 aaatggcgcc gtcaaattaa cgagcaacgt ctcttgccac accgccgtgg gcgtctcctc
      841 gatcgtcgaa cgcggcgcaa cggcagcgtt gtgcacgatc acttccggcg cgggcagttg
      901 ccgcacgagc tcggcgccga gctcctgcgt cgcgaacgcg tccgacaaat cgcagccgaa
      961 agcccgcacc tggggcgagc cgcggcggcg ggcaagctcc acggtttcgt cttgctcggc
     1021 cgagggacgg ccgacgagcg cgagcgacag cccgcggtgc gcgagctcga gcgccgtcgc
     1081 gcgaccgatg ccgcggctcg cgcccgtcac gaccgcgagt ctcacgccgg gcgccccccg
     1141 agcccgagcg aaagcagcac ctcgctctcc gaaagctcgc cgcggcgcac gatcgaggta
     1201 gcacgcgcgt tcgtctgaca cgcgccgcgc gcgctcaagc agccgtgcac gagcgttacc
     1261 tcgcaataag caccgcgcgc gcccgcgagc tcgatcagcg aggcgacgac gtcctcggcg
     1321 atcgtctctt gcagcacgag cctgcgcgcg caggcgtcga ccaagcgcgc gatcgcgccc
     1381 aagccgagca cgcgcgcgcc cggccgatac acgacgttcg cgcggccgag gccgggcatc
     1441 aggtgatgcg ggcacacggt cgcgaccgag acctcgcgta aggcgacgat gcccgcgggc
     1501 gtctgtgcga gcgtcgagcc ttgctcgatt agcgcgcgcc gatcgacggc atagccgctc
     1561 aagagctcg
//
LOCUS       DATIML010000851         1890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5382140, whole genome shotgun sequence.
ACCESSION   DATIML010000851 DATIML010000000
VERSION     DATIML010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5382140"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="VLJ38_14790"
     CDS             complement(<1..863)
                     /locus_tag="VLJ38_14790"
                     /inference="COORDINATES: protein motif:HMM:NF006569.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine aminotransferase"
                     /protein_id="HSU40843.1"
                     /translation="MTDSKLPAVGTTIFTVMSRLAEEHGAVNLGQGFPDFEPPEALKA
                     ALSRHVAAGKNQYAPMAGVPALRTRIAAELERSYGRKVDPESEITVTSGATEAIFDAI
                     AAVVRPGDEVIVLDPAYDSYEPSVLLQGGRCVHVPLLAPSFAVDWQRIADAVNPRTRL
                     LILNFPHNPSGAVLAPSDLETLAAILRDTDVLVLSDEVYEHIVFDGRAHQSILRNEEL
                     FARSFAVGSFGKSYHATGWKIGWAAAPLRLTSELRKVHQFVTFASSTPAQHALADVLA
                     LDPTHLRTLGA"
     gene            complement(870..1313)
                     /locus_tag="VLJ38_14795"
     CDS             complement(870..1313)
                     /locus_tag="VLJ38_14795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40844.1"
                     /translation="MKLSEGDNHLISARQGLAICQVWTRPDLSAEQGAKNARQMSEYL
                     ERHVLQPSSPYRGVIFDLRRGPPVFGPKTRETLAGFFATAARLDIAIAVLVGDSPIQV
                     LQFRNLCRDSGGRADVFDNEADAVRWFGAAPVSPFAANGSKKPPH"
     gene            1484..>1890
                     /locus_tag="VLJ38_14800"
     CDS             1484..>1890
                     /locus_tag="VLJ38_14800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40845.1"
                     /translation="MDARAPVEKRWEPGRMVARVLCAIFAVIGALPLLAAALLSSGPL
                     TRWAERETARVLRQELGVSATYRVELRLLPLRLAVVGLTVPATDGGSPALVAESVTVA
                     PRVFALFGGRLDLGEIEIKRPRARIVVKDGKVT"
BASE COUNT          278 a          618 c          663 g          331 t
ORIGIN      
        1 aacgcgccga gcgtgcggag gtgcgtgggg tctagggcga gcacgtcggc gagcgcgtgt
       61 tgcgcgggcg tcgagctcgc gaaagtcacg aactggtgca ccttgcggag ctcgctcgtg
      121 agtcgcagcg gcgccgcggc ccagccgatc ttccagccgg tcgcgtggta gctcttgccg
      181 aaggaaccga cggcgaacga acgagcgaag agctcttcgt tccggagaat gctctggtgt
      241 gctcgaccgt cgaacacgat gtgctcgtag acttcgtccg agagcacgag cacgtccgtg
      301 tcgcgcaaaa tcgcggcgag cgtctcgagg tcgctcggcg cgagcacggc gccgctcggg
      361 ttgtgcggga agttgaggat gagcaagcgc gtgcgggggt tcacggcgtc ggcgatgcgc
      421 tgccaatcga cggcgaagct cggcgcgagc agcggcacgt gcacgcagcg gccgccttgc
      481 aacaagacgg acggctcgta cgagtcgtac gccggatcga ggacgatcac ctcgtccccc
      541 ggtcgcacga cggcagcgat ggcgtcgaag atggcctccg tggcgccgct cgtgacggtg
      601 atttcgctct cggggtccac ttttcggccg taggaacgct cgagctcggc cgcaatacgc
      661 gtccgcaacg ccggcacgcc cgccatgggc gcgtattggt tcttgccggc ggccacgtgg
      721 cgcgagagcg ccgccttgag cgcttcgggt ggctcgaagt cgggaaagcc ctgtcccagg
      781 ttgacggcgc cgtgttcctc ggcgagccgc gacatcacgg taaagatcgt cgtgccgacg
      841 gcgggcagct tcgagtccgt caccgttcct cagtgcggtg gttttttcga gccgttcgcc
      901 gcgaaggggc tcacgggcgc cgccccgaac cagcgcacgg cgtccgcttc gttgtcgaac
      961 acgtccgcgc gcccgcccga gtcgcggcag aggttacgga actgcaggac ctgaatcggc
     1021 gagtcgccga cgagcacggc gatggcgatg tcgaggcgcg ccgcggtcgc gaagaagccg
     1081 gcgagcgtct cgcgcgtctt cggcccgaac acgggcgggc cgcgacgcag gtcgaagatc
     1141 acgccgcggt aaggactgct cggctgcagc acgtgtcgct cgagatattc cgacatctgg
     1201 cgggcgttct tggcgccctg ctcggcgctc aggtcgggtc gggtccagac ctggcatatc
     1261 gccaacccct gccgggcgga aatgaggtga ttgtcgcctt cgctgagctt cacgcggggt
     1321 cccttagact ccttgacgag cggttcgtgg acaaacaggt caagttttat gctgggtttt
     1381 caaagttgtt cgtgggcgtc cccagctagc tctatcacga gctctacgat tcccctgctt
     1441 ctgtgcctcc acgttacgcc ggggctacgc tttcggcctg aacatggatg cccgcgcgcc
     1501 cgtcgagaag cgctgggagc ccggccgcat ggtcgcccgg gttctctgcg cgatcttcgc
     1561 cgtgatcggc gcgctgccgc tccttgccgc cgctctgctc tcgagcggcc cgctcacgcg
     1621 ctgggccgaa cgcgagaccg cccgtgtgct gcgccaagag ctcggtgtct cggcgactta
     1681 ccgggtcgag ctccggctcc tgccgctccg gctcgcagtc gtgggcctca ccgtgcccgc
     1741 gaccgacggc ggctcgccgg cgctcgtcgc cgagtccgta acggtcgcgc cgcgcgtttt
     1801 tgcgctcttt gggggacggc tcgatctcgg tgaaatcgag atcaagcgcc cgcgcgcgcg
     1861 tatcgtggtc aaggacggca aggtaacgaa
//
LOCUS       DATIML010000852         4463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1626958, whole genome shotgun sequence.
ACCESSION   DATIML010000852 DATIML010000000
VERSION     DATIML010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4463
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626958"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..899)
                     /locus_tag="VLJ38_14805"
     CDS             complement(<1..899)
                     /locus_tag="VLJ38_14805"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40846.1"
                     /translation="MLAPGSMFGSRWIVGGRLGQSDTAEVYEAEATSERRFAAIKLFD
                     AALGLEPAWSEHAALTRKLSELPGEGLARAYDLGVEPKLGRPYVASERLTFPTITRYV
                     SERGPLPLRVLAQALTTLAGALDAAHGAGIVHGGLKPQNVFVSFDNPQWARLTDFGVT
                     RLRHAAGRGPAQLLGFSAPEGAATPAADRYALGLVCFFGATGIPWYTAFRGGDETGDR
                     LATRLASDRARSQGAELEPLFDAWFARALHADPTARFTTTVEMANAFVEIFTGAPTAE
                     MPARPSLPRASATASLPAPTRSSL"
     gene            complement(955..1983)
                     /locus_tag="VLJ38_14810"
     CDS             complement(955..1983)
                     /locus_tag="VLJ38_14810"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HSU40847.1"
                     /translation="MFRRALASLVLVGWSLTTAPAAASANGAPQVHVVQPGQRLGSIA
                     KRYNVTIEAIAYANGIRQHAPIKPGQRLVIPDRSDKDGSEARAQNPDVGDAPDAHATR
                     RASLERPSNGRRRSGPAWQDYVRSPKRKNWIELSNHISKWRGLVIDAKGHLRPQARAA
                     ICELLGATGDHPGAPDRLLRLLVDVSNTFGGRPLQIVSGYRTTSFFRDSRHKTSQAVD
                     FTVIGVPNAVARDYLLTLDSVGVGYYPNSTFLHLDVRPHSTRWIDYAGPGEAPRKTPH
                     GEPARTPVDFDELAELAAESSGLRDTESAARAPEVQTDSAPTTGAAPAASPKPAAPAA
                     ESAPAAHP"
     gene            2234..2773
                     /locus_tag="VLJ38_14815"
     CDS             2234..2773
                     /locus_tag="VLJ38_14815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40848.1"
                     /translation="MKSNFDRQEAHDNGDTLPEQANVYVPPRPLAQISDHRTMDFKAI
                     RIAAELDPRQAKTQLKLMLPPRRHRGLPLFIFGSAVVLALFGVVIYMAVAGPSPLPLV
                     TTDAAPPPAATTVRFLGASAPVGPTATTAPVATSAPTEPVTAAAPSAPKAAAAPRVRS
                     SAPRSAPHKAKVVREPWLE"
     gene            2761..3783
                     /locus_tag="VLJ38_14820"
     CDS             2761..3783
                     /locus_tag="VLJ38_14820"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HSU40849.1"
                     /translation="MARVGRALGVALALFVAAMSRPSRADDESDRAEQSFRDGNRAFA
                     SGDYHAAFEAYRAAWSLRQSFDVACNLGRTEIELGLSRDAAEHLDYCLRTYSVSSRDD
                     VRAAKERFSTLLQQVRREVGALTLEVRPAGTEITVDGASYGTAPLGHELFVTPGSHLV
                     RAHLTGFRDEERSITAEPGAALGLSISLEANARPLAAAPVAGAPSRPQPARKGIEPRT
                     IVVISGAAASLIALGVGVGFALDAGAAHADASRHGEAASETGTGCPPRSTSPDCVALT
                     DAVSREKRSRHRADAALLTGVILGAATVGAWLVMPDLARSKTTSLRALPWIGRETTGV
                     SLAGTY"
     gene            3877..>4463
                     /locus_tag="VLJ38_14825"
     CDS             3877..>4463
                     /locus_tag="VLJ38_14825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40850.1"
                     /translation="MLVVACSSPLAAKEASSAELATARRLFAEATALEASSDWNAAVS
                     KLKSAVAIKETPGLRYHLAHCEEQLGALVAASFDYERAAELIRSGAPAPDVEPLLPLA
                     QRRIDSRIAKLDIVVPAGTSALAEVDGRSLPRSALGTSLRLDPGPHRVVVRANGEVDY
                     QVELSLGTGERRTLKVFFHEATEAKPSERPRSTALA"
BASE COUNT          663 a         1514 c         1601 g          685 t
ORIGIN      
        1 agggacgagc gagtgggtgc gggcagcgac gcggtcgcgc tcgcccgcgg caaggacgga
       61 cgcgccggca tctcggccgt gggagcgccc gtgaagatct cgacgaacgc gttggccatc
      121 tcgacggtgg tcgtgaagcg agcggtcgga tcggcgtgga gagcgcgcgc gaaccaagcg
      181 tcgaagagcg gctcgagctc cgcgccctgg ctgcgtgcgc ggtcggacgc gaggcgtgtc
      241 gccaggcggt cgccggtctc gtcaccgccg cggaaggccg tgtaccaggg aatgcccgtc
      301 gcaccgaaga agcacacgag cccgagcgcg tagcggtcgg cggcgggcgt cgcggcacct
      361 tcgggggcgc tgaagccgag caactgcgcg gggccgcggc ccgccgcgtg gcgcagtcgg
      421 gtcacgccga aatccgtgag ccgcgcccac tgaggattgt cgaacgagac gaacacgttt
      481 tgcggcttga gcccgccgtg gacgatgccc gcgccatgtg cggcgtcgag cgcgcccgcg
      541 agcgtcgtga gcgcttgggc gagcacgcgg agcggcagcg ggccgcgttc gctcacgtag
      601 cgcgtgatcg taggaaacgt gaggcgctcg ctcgcgacgt acggccgtcc gagcttcggc
      661 tcgacgccca gatcgtaggc acgcgcgagc ccctcgccgg ggagctccga gagcttgcgc
      721 gtgagcgccg cgtgctcgct ccacgccggc tcgagcccga gcgcggcgtc gaacagcttg
      781 atggcggcga aacgccgctc actcgtggct tcggcttcgt agacctcggc ggtgtcgctc
      841 tggccgagcc gcccaccgac gatccagcgc gagccgaaca tgctgccggg agcgagcacc
      901 ctagcctcga gtcctacgat cgccgagggc gggcgtgcgc gcgagcgctt tcgttcacgg
      961 gtgtgcggcg ggcgccgatt ctgcggcggg cgccgccggc ttggggctcg ctgccggcgc
     1021 tgcgcccgtc gtcggcgcgc tgtcggtttg gacctccggc gcgcgcgccg cggattcggt
     1081 gtcgcgcaag ccgctgctct cggcggcgag ctcggcgagc tcgtcgaaat cgacgggcgt
     1141 gcgcgcgggc tcgccgtgcg gcgtcttgcg cggcgcttcc ccggggccgg cataatcgat
     1201 ccagcgcgtg gagtgcggtc gcacgtcgag gtgcaagaac gtcgagttcg gatagtagcc
     1261 gacaccgacg ctgtcgagcg tgagcaggta gtcgcgcgcg acggcgttcg gcacgccaat
     1321 cacggtgaaa tccacggcct gactcgtctt gtgccgtgaa tcgcggaaga acgaggtcgt
     1381 gcggtagccg ctcacgattt gcagcggccg gccgccgaac gtgttgctca cgtcgacgag
     1441 caagcgcaaa aggcgatcgg gcgcgccagg gtgatcgccg gtcgcgccga ggagctcgca
     1501 gatggcggcg cgtgcttgcg gccgcaagtg gcccttggcg tcgatgacga gcccgcgcca
     1561 tttggaaata tgattcgaga gctcgatcca gttcttgcgt ttggggctgc ggacgtagtc
     1621 ctgccaggcc ggcccggagc ggcgccggcc gttgctcggt cgctcgagtg aagcgcgccg
     1681 agtcgcgtgt gcgtcgggcg cgtcacccac gtcgggattt tgagcgcgcg cttcgctgcc
     1741 gtccttgtcg ctgcgatcgg ggatgaccag gcgctggccg ggcttgatcg gtgcgtgctg
     1801 gcgaatgccg ttcgcgtaag cgatcgcttc gatcgtcacg ttgtagcgct tggcgatgga
     1861 gccgagacgc tgccccggct gcacgacgtg cacctggggc gcaccgttgg ccgaggcagc
     1921 cgcgggagcc gtggtgaggg accatccgac gaggaccagg gaggcaaggg cgcgacgaaa
     1981 catggcgaac agagtcgata ccggtcgcac aaaacggggc tgccggccag acccgtgtcg
     2041 ctgggtcggc cgaccgggac gtgaaatttg ccggtgagac ggtagcgaac ggctgcgacg
     2101 cggcgaacgc cctcctccga gcacggggcc tcactgagct ttctttggaa ttaggagcaa
     2161 ttacgggtgc cggcgtgccg accggcttga cgcccgaccg ggattatcgg catttccatg
     2221 cacgcgcgtc cgtatgaaat ccaatttcga ccgtcaagaa gcgcacgaca acggcgacac
     2281 gttgccggaa caggcaaacg tctacgtccc gccgcgtccg ctcgcgcaaa tttccgatca
     2341 ccgcacgatg gatttcaagg ccatccgcat cgcggccgag ctcgatccgc gacaggccaa
     2401 gacgcagctc aaattgatgc tgccgccccg gcgccaccgc ggcttgcctc tcttcatctt
     2461 tggttcggcc gtcgtgctcg cccttttcgg cgtcgtgatt tacatggcgg tcgcggggcc
     2521 gtcgccgctg ccgctcgtga cgacggacgc ggctcctccg ccggccgcca ccaccgtgag
     2581 gttcctgggc gcgtcggcgc ccgtcgggcc gaccgccacg acagcgcccg tcgccacgag
     2641 cgcgccgacc gagccggtca cggcggccgc tcccagtgcg ccgaaagctg ccgcggcgcc
     2701 gcgggtcagg tcgtcggcgc cgcgctcggc gccgcacaag gcgaaggtcg tccgagaacc
     2761 atggctcgag taggtcgcgc gctcggcgtc gcgctcgcgt tgttcgtggc cgcgatgtcg
     2821 aggccgagcc gcgccgacga cgagagcgac cgcgcggaac agtcatttcg cgacggcaat
     2881 cgcgccttcg ccagcggcga ctaccacgcg gctttcgaag cctatcgcgc cgcttggtcg
     2941 ctgcggcaat cgttcgacgt agcgtgcaac ctcggacgca cggaaatcga actcggactt
     3001 tcgcgcgacg ccgccgaaca cctcgactat tgtctacgca cgtattccgt gagctcgcgc
     3061 gacgacgtcc gcgccgcgaa ggagcgcttc tccacccttt tgcaacaggt gcggcgcgag
     3121 gtcggcgcgc tcacgctcga ggtgcgcccc gcaggcaccg aaatcacggt cgatggcgcg
     3181 tcgtacggca cggctccgct cggccacgag ctcttcgtga cgccgggatc gcacctcgtg
     3241 cgagcgcatc tcaccggctt tcgcgacgaa gagcgttcga tcacggccga gcccggtgcg
     3301 gcgctcgggc tcagcatctc gctcgaggcg aacgctcgac ccctcgccgc ggcgcccgtg
     3361 gccggtgcgc cttcccgacc gcaacccgca cgcaagggca tagagccgcg cacgatcgtc
     3421 gtgatctcgg gagcggccgc gagtctaatc gcgctcggcg tcggcgtcgg ttttgcgctc
     3481 gacgcgggag cggcccacgc ggacgcctcc cgccacggcg aggcagcgag tgagaccggg
     3541 acgggctgcc cgccgcgctc gacttcgcca gattgtgtgg cgctcaccga cgccgtttca
     3601 cgcgagaagc gcagccgcca tcgggcggac gcagcgcttt tgaccggtgt catcctgggc
     3661 gccgccaccg tgggggcgtg gctcgtgatg cccgatctcg cgcgctcgaa aacaacgagt
     3721 ctgcgggcgc tgccgtggat agggcgtgaa acaaccgggg tgtcgctcgc gggcacttac
     3781 tgaggcgcag cgatgcagtg gttcggggtc gggggtcgcg caggctcgtg ctcgggctcg
     3841 cgtactctaa agcgcctcct cgcgctggtc gggattttgc tggtcgtcgc ttgctcgagc
     3901 ccgctggctg cgaaagaggc gtcgtcagcc gagctcgcca cggcgcgccg gctcttcgcc
     3961 gaagcgaccg cgctcgaggc gagctcggat tggaacgctg ccgtgagcaa gctgaagagc
     4021 gccgtcgcga tcaaagagac gccgggactc cggtatcatt tggcgcattg tgaggagcag
     4081 ctgggcgcgc tcgtcgcggc ctcgttcgat tacgagcggg ccgccgagct gattcgcagc
     4141 ggagcgccgg cccctgacgt cgagccactg ctcccgctgg cgcaacgccg catcgattca
     4201 cgcatcgcca agctcgacat cgtggtgccc gcgggcactt ccgcgctggc cgaagtcgac
     4261 ggacgctcgc tgccgaggag cgcgctcggc acgtcgctcc gactcgatcc gggcccgcac
     4321 cgggtcgtcg tccgcgcaaa cggggaagtc gactatcagg tggagctgtc gctcgggacg
     4381 ggcgagcgcc gcacgctcaa agtcttcttc cacgaagcaa cggaggcaaa accctccgag
     4441 cggccacgat ccacagccct cgc
//
LOCUS       DATIML010000853         3297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5093646, whole genome shotgun sequence.
ACCESSION   DATIML010000853 DATIML010000000
VERSION     DATIML010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3297
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5093646"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            243..1370
                     /locus_tag="VLJ38_14830"
     CDS             243..1370
                     /locus_tag="VLJ38_14830"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HSU40851.1"
                     /translation="MAPRVARRAEPDGDSAQTPFAEGYAMPAEWEPHEATWLAWPHEA
                     SDWPGKFEVIPWVFAEIARVLTQGERVRLIVGNAAEKKRARAVFASAGVDLKRVDFVT
                     AATDRSWTRDFVPSFVVKRGGKARQKGALAAARFRFDGWHRYPNHTKDIAAGLVALKF
                     GRTPAFEPVVTLGSKRHHVVLEGGAIDVDGEGTLLATEECLLDGKQARNPELGQGLTE
                     QVLRDFLGAQKVVWLGRGIAGDDTGGHVDDFARFVAPGRVVVAQELDKKDPNHRVLGD
                     ALERLRGARDARGRRFDIVPLPMPAPIVFDGQRLPASYANFYVASHAVLVPTFNDPND
                     RVALGIFGELFPGRDIVGIYSRDLVLGLGTLHCSTQQEPRP"
     gene            1340..2779
                     /locus_tag="VLJ38_14835"
     CDS             1340..2779
                     /locus_tag="VLJ38_14835"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HSU40852.1"
                     /translation="MLDAAGAATVARSGAAATRRELARARAWCVAGALLAAACVKAPI
                     RPVQAPDGAPPKNQGPTFELDGAPFCFAGANNYYPIYKPRPVVDDLFAAARALDFRVL
                     RVWGMLDRGSLDGSVPNADPGGGDKEGVYFQYWDTAKQAPAYNDGPNGLERLDYVLAK
                     AADAKLKVIVVLVNNWREFGGVDQYLMWYGRAAHHEFFTAPELRRAYEQWLAHVILRK
                     NQLNGRVYRDDPTVFAWELANEPRMNDGSAFDRPNGWDAQTLTRWADEMSAYVKTLDP
                     NHLVAVGDEGFLNGGGEHWAYAAKDGVDHRALTALRGVDFGTFHLYPEQWGVTAEWGS
                     AWISEHLRVARELGKPTLFEEYGMTVDRAGGTTGDITRGAAERERAYRSWNETLLRGG
                     GNGALAWMLAGMDEPSAGKPVARYPDYDHYAFYRDDATGRLLGELAQRFRAAPACVNQ
                     PPSNAPASPFVRVRRSETHVAFGWFGTDG"
     gene            complement(2800..>3297)
                     /locus_tag="VLJ38_14840"
     CDS             complement(2800..>3297)
                     /locus_tag="VLJ38_14840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40853.1"
                     /translation="EPLGHTGSNGRVELALSGDEGDRATLSVHCPAGFASPERPLSVG
                     LRHLSPGSPPPKFEVACLRLVHSVLVGVLASSGPHLPILHLKQKVGETDEHGVAHVLL
                     SAGNDERLTLTLDTSRSPGLRPQNPSLSFIARDHDEFVLLEHKFVEERPRAIRVVRRR
                     GPQPL"
BASE COUNT          541 a         1074 c         1163 g          519 t
ORIGIN      
        1 atccgttcgg ggtcgtgctc gccgaggcgg gcgagggcga ggagacgctc gtcgtcgatt
       61 gcgagctggg gcgtatcgaa gaagtgcggc gaaattggcc atttttccgc gaccggcgca
      121 tcgacgccta cggcggactc acgtcgcgct ttctcgacca gcgggcagga cgctaagcca
      181 cgatgaaacg cagcacctcg aaaacgcgcg cgacccaacg cgccctccgc aagccttcac
      241 gcgtggcacc gcgcgtcgcg cgtcgcgcgg agccggacgg cgactcggca cagacgccct
      301 tcgccgaagg ctacgccatg ccggccgagt gggagccgca cgaggcgacc tggctcgcct
      361 ggccgcacga agcgagcgat tggccgggta agttcgaggt gattccgtgg gtgttcgccg
      421 aaatcgcgcg cgtgctcacg cagggcgagc gggtgcggct catcgtcggt aatgccgcgg
      481 agaagaagcg cgcgcgcgcc gtgttcgcga gtgccggcgt ggatctgaag cgcgtcgatt
      541 tcgtcacggc ggcgaccgat cgctcgtgga cgcgggattt cgtgccgagc ttcgtcgtga
      601 agcgcggggg caaggcgcgg caaaagggag cgctcgcggc ggcgcgtttt cgcttcgacg
      661 gctggcatcg ctatccgaac cacacgaagg acatcgcggc ggggctcgtg gccttgaaat
      721 tcggccgcac gccggcgttc gagcccgtgg tcacactcgg ttcgaagcgc caccacgtcg
      781 tgctcgaagg cggcgccatc gacgtcgacg gtgaggggac gttgctcgcg acggaagagt
      841 gtctgctcga cgggaagcag gcgcgcaatc ccgagctcgg gcaaggcctg accgagcagg
      901 tgctgcggga ttttttgggg gcgcaaaagg tcgtgtggct cggccgcggt atcgcgggtg
      961 acgacacggg cggccacgtc gatgatttcg cgcgcttcgt cgcgccggga cgcgtggtcg
     1021 tcgcgcagga gctcgacaag aaggatccga accaccgcgt gctcggcgac gcgctcgagc
     1081 ggctgcgtgg cgcgcgcgac gcgcgaggcc gccgcttcga catcgtgccc ttgccgatgc
     1141 cggcgccgat cgtcttcgac ggccagcgcc tgcccgcgag ctatgcaaac ttctacgtgg
     1201 cgtcgcacgc cgtgctcgtg ccgaccttca acgacccgaa cgaccgcgtg gcgctcggca
     1261 ttttcggcga gctctttccg ggacgcgaca tcgtcggcat ttactcgcgc gacctcgtgc
     1321 tcggtctcgg gacgctgcat tgctcgacgc agcaggagcc gcgaccgtag ctcgctccgg
     1381 cgcggcggcg acgcgccgtg agctcgcgcg cgctcgcgcc tggtgcgtcg cgggcgcgct
     1441 cctcgccgca gcgtgcgtga aggcgccgat tcgtcccgtg caagcgccgg acggagcccc
     1501 cccaaaaaac caaggtccga ctttcgagct cgacggcgcg cccttttgct tcgcgggcgc
     1561 gaacaactac tacccgatct acaaaccgcg ccctgtcgtc gacgatctgt tcgcagcggc
     1621 gcgcgccctc gacttccgag tcctccgcgt ctggggcatg ctcgatcgtg gctcgctcga
     1681 cggcagcgtg ccgaacgcgg atccgggcgg cggcgacaag gagggcgttt actttcaata
     1741 ctgggacacc gcgaagcagg cgcccgcgta caacgacgga ccgaacggcc tcgaacgcct
     1801 ggattacgtg ctcgccaaag cggccgacgc caagctcaaa gtcatcgtcg tgctcgtcaa
     1861 caactggcga gagttcggcg gcgtcgatca gtatctcatg tggtacggcc gcgcggcgca
     1921 ccacgagttc ttcacggcac ccgagctcag gcgtgcttac gagcagtggc tcgcgcacgt
     1981 catcctgcgc aaaaaccagc tgaacggccg cgtgtaccgc gacgatccca cggtgttcgc
     2041 gtgggagctc gcgaacgagc cgcgcatgaa cgacgggagc gccttcgatc gtccgaacgg
     2101 ttgggacgcg cagacgctca cgcgctgggc ggacgaaatg tcggcgtacg tgaagacgct
     2161 cgacccgaat cacctcgtgg ccgttggtga cgaaggcttc ttgaacggcg ggggcgaaca
     2221 ctgggcgtac gcggcgaagg acggcgtcga tcatcgcgcg ctcaccgcgc tgcgcggcgt
     2281 cgatttcggc acatttcatc tgtatccaga gcagtggggc gtcacggccg agtggggcag
     2341 cgcttggatt tcagagcacc tgcgggtcgc gcgcgagctc gggaaaccga cgctcttcga
     2401 ggagtacggc atgaccgtcg accgcgccgg gggcacgacg ggcgacatca cacgcggcgc
     2461 agccgaacgc gagcgcgcct atcggagctg gaacgagacg ctcctgcgcg gcggcggcaa
     2521 cggcgctttg gcctggatgc tcgccggcat ggacgaaccg agcgccggca agcccgtggc
     2581 gcgttacccg gactacgacc actacgcgtt ttaccgggat gacgcgacgg ggcgcctgct
     2641 cggggagttg gcgcagcggt tccgggcggc gccggcgtgc gtgaaccaac cgccttcgaa
     2701 cgcgccagcg tcgccgttcg tgcgggtgcg gcggagcgag acgcacgtcg cgttcggttg
     2761 gttcggaacg gacggctaag tcacgttggc gttcaccgcc tacagcggtt gagggccacg
     2821 tctgcgcacc acacgaatgg cccgaggtcg ctcctcgacg aacttgtgct cgagcaagac
     2881 gaactcgtcg tgatcgcgtg cgatgaagct caagctcgga ttttgcggcc gcaagcctgg
     2941 gcttcggctc gtgtcgaggg tcagcgtcaa gcgttcgtcg ttgcccgctg acaagagaac
     3001 gtgggcgacg ccgtgctcgt ccgtttctcc gaccttttgc ttgagatgca agatgggcaa
     3061 atgtggcccg ctgctcgcga gcacgccgac gaggaccgaa tgcacgagcc tgagacaagc
     3121 gacctcgaac ttgggcggcg gcgagcccgg actcaggtga cgcaagccga cgctgagcgg
     3181 gcgctcgggc gaggcgaagc ccgcgggaca atgcacgctg agcgtcgcgc ggtcgccttc
     3241 atcgccgctg agcgctagtt cgacgcgccc attcgaacca gtgtgtccga gcggctc
//
LOCUS       DATIML010000854         5796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1917726, whole genome shotgun sequence.
ACCESSION   DATIML010000854 DATIML010000000
VERSION     DATIML010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5796
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1917726"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VLJ38_14845"
     CDS             <1..900
                     /locus_tag="VLJ38_14845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40854.1"
                     /translation="GASAIALISTVCGAAAAQSAPKPTAPPPAAPPAAAPPPVAAPPA
                     PAAAPPPPAYPAPPGYAAAPAPNYPAQPAPPGPPLAPSPMYGPPPGYGSPYYGPPPSA
                     YPPPLQPPKRPEGTAGFVGRPMIGLAWDVGIPVASVHDFTSNVSAAGFDISLRYWLHP
                     RITIGLEVEWQTYRDEKPRTTYPLDHGALTATAYNSLQAGSLRFDADYYFLDRGPVLP
                     FAGVNIGYGWSTFQTAAADIALYDDEDSVVLGAEVGALLALAPRKPLVLLAARYSAAP
                     AMEFLSSVKDVQSITLQLGLLLY"
     gene            complement(944..1510)
                     /locus_tag="VLJ38_14850"
     CDS             complement(944..1510)
                     /locus_tag="VLJ38_14850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSU40855.1"
                     /translation="MTAAPRLRFSFAEYLRVDSESPAKHEFLDGMILAMAGGSPEHAA
                     LAMAVGTSLQRQLEGKRCRVYSADLRIRVPVTGFAAYPDVTVVCDRLERDPDDASTAT
                     NPSVVVEILSPSTEHYDRGEKLRQYQQLASLLHVVLLAHDERRIDVWSRSETGWVVTT
                     AKAGDRVRLDGIGCALTVDDVYRDPLNT"
     gene            complement(1569..2102)
                     /locus_tag="VLJ38_14855"
     CDS             complement(1569..2102)
                     /locus_tag="VLJ38_14855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40856.1"
                     /translation="MTQSTEQRTSLIDAEWDSVPPAVPVSSVAPESLVLRRVSASPAE
                     PTAPARPIPALLHVLGVVAASIVFVATATSVSADRNLAAAGHQVEGELADDVASMPVH
                     TVAASPLAKPAIASAPPLVAGGAPDSDSALDVRVRAADPSTAAPPPTTKHVRAASGAR
                     ARAKSWNRKLPPSDNPF"
     gene            complement(2132..2566)
                     /locus_tag="VLJ38_14860"
     CDS             complement(2132..2566)
                     /locus_tag="VLJ38_14860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40857.1"
                     /translation="MAPSPPRLPARDFDTLPDADVMTDADAAPSAPPPLPPARRRTRA
                     RRSLLKLIGAAGALMALAGTAFAMHSQADHDQSANAPSGVPSVASAGAAAQPTHELVG
                     PSAEARELKFQKDPNPTAKHAPTTKSRSKAKPKAKASSPRHA"
     gene            complement(2907..4298)
                     /locus_tag="VLJ38_14865"
     CDS             complement(2907..4298)
                     /locus_tag="VLJ38_14865"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU40858.1"
                     /translation="MRTGPALPGTSRGEDSSTLTGASLGGTMVAIPRLLVTVLREGGK
                     VGSRTVELEGERIRVGSHPSNELLITDRLVSRFHCMLTLERGQWAITDTESLNGTLLL
                     GVRVREAILPPGECEIAIGESVVRVAQLSPEKVTRVPPQTSFGDLRGRTLAMRQVFSM
                     LERVAASDATVLVQGESGTGKELVASEIARRSQRRAGPFLTVDCGAISPNLVESELFG
                     HARGAFTGADRHRVGAFEAADRGTIFLDEIGEMPLEMQPKLLRVLENREVRRAGENDA
                     RKVNVRVIAATNRNLEREVNRGRFREDLYFRLSVFTVRLPPLRERADDIPELVQALLE
                     RMGATDSARLFTPQILAGLAQHEWPGNVRELRNYVERAVILEDATSPSHALRTSAAPD
                     AMAHELQSEVSIEAPFKTAKEALIASFERTYLTELMAWAGGNVSRASRKAKLDRMYLH
                     RLLQRYGLKREDE"
     gene            4389..5597
                     /locus_tag="VLJ38_14870"
     CDS             4389..5597
                     /locus_tag="VLJ38_14870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40859.1"
                     /translation="MAVASYPACEVLFELFSAPRGKVLLGRVATGREAGRVVRLRLVG
                     DSVPLRLNDIVGKASTLTHPDIVKLLGIVCDGSHYYLASEYLPGISLFELIARARARQ
                     QGFELAAAVHVTYSALRLVEQAAALLEALSLPRTRLFYTDSIWIAEFGETLLAEPGLA
                     SELGARGDDESGVRAVQGDIVTAAVELYHLATGKLLTHDLTAAVEQALPEPLAHTLTE
                     VFSWSDTEASDTVSSFARALGRLPAELRGDDAGVARALRLLAADVLSEREEKLADYRP
                     DMGPAIDGPTRVYALPDPDAAPDEPTVVLGRHLIARRPALGARPVASGQPKRALVRAA
                     QKPRVDLASRETPLAPVVPHDAPTSARKTAHRGFVFVALGLFAVLVLGFVARTQPAWV
                     RALAARVKLR"
BASE COUNT          854 a         1987 c         1978 g          977 t
ORIGIN      
        1 ggagcctcgg ccatcgcact gatttcgacc gtgtgcggcg ctgccgcggc tcaatcggcg
       61 cccaagccta cggccccgcc gcccgccgca ccgccggcag ccgctccgcc gcccgttgcg
      121 gcgccgcccg cgccggcagc cgctccgccg cctcctgcct atccggcacc gcctggctac
      181 gctgccgcgc cggcgccgaa ctatccggct cagcctgcgc cgcccggtcc gccgcttgcg
      241 ccctcgccga tgtacggtcc gccgccaggt tacggctcgc cgtactacgg tccaccgccg
      301 agtgcgtacc cgccgccact gcaaccgccg aagcgcccgg aagggacggc aggtttcgtc
      361 gggcgtccca tgatcggcct cgcgtgggac gtagggatcc ccgtcgcgag cgtccacgat
      421 ttcacgagca acgtgagtgc ggcgggattc gatatttcgc tacgctattg gctgcatccg
      481 cgcatcacga tcgggctcga agtcgagtgg cagacgtacc gcgacgaaaa gccgcgcacg
      541 acgtatccac tcgaccacgg cgcgctcacc gcgacggcct acaatagcct gcaggcgggc
      601 tcgctccgtt tcgacgccga ctactacttc ttggatcgcg gccctgtcct gccgttcgcg
      661 ggagtgaaca tcggctacgg ctggagcacg ttccagaccg ccgccgccga tattgcgctc
      721 tacgacgacg aagattccgt ggtgctgggc gccgaggttg gcgccctgct cgcgctcgcc
      781 ccgcgcaaac cgttggtgct gctcgcagcc cgctacagcg ccgcgccggc catggagttt
      841 ctgagctcgg tcaaggacgt gcagtcgatc acgctgcagc tcgggctctt gctctactga
      901 gcgcgagcca gcgcgcggcg cgctacccga gcgcgccgca ggctcaggtg ttcaacgggt
      961 cgcgatagac gtcgtcgacc gtcaaagcac agccgatccc gtccagacgg actcggtcac
     1021 cagcctttgc ggtcgtgaca acccagcctg tctcgcttcg gctccacacg tcgattcttc
     1081 tctcgtcatg cgcaagcaag acgacgtgca gaagcgacgc gagctgctga tattggcgga
     1141 gcttttctcc gcgatcgtag tgttccgtgc tggggctcaa gatctccacg acgacgctag
     1201 gattcgtcgc cgtgctcgca tcatcaggat ctcgctcgag ccgatcgcag actacagtga
     1261 cgtccggata ggccgcgaat ccggtgacag gaacgcggat tcgaaggtca gcgctgtaca
     1321 cacgacagcg ctttccctcg agctgcctct ggagcgacgt gccaaccgcc atggcgagcg
     1381 cggcatgctc cggggaacca cccgccatgg cgaggatcat gccatcgaga aactcatgct
     1441 tcgccggact ctcggaatcg acgcggaggt actcggcgaa cgagaagcga agccggggag
     1501 ccgccgtcac cgagctagtt tagcacgctc gcgcagttgc cccgaacacc gaccccacgc
     1561 cggcgccttc aaaacggatt gtcgctcggc ggcagcttgc gattccacga cttggctcga
     1621 gcgcgcgctc cggatgccgc tcgaacgtgc ttcgtcgtcg gcggcggcgc ggccgtgctc
     1681 gggtcggccg cgcgcacgcg gacgtcgagc gcgctgtccg aatccggcgc gccacctgcg
     1741 acgagagggg gcgccgacgc gatggcgggt ttggcgaggg ggctcgctgc gacggtgtgg
     1801 accggcatgc ttgccacgtc gtcggcgagt tcgccctcga cttggtgccc tgcggccgcg
     1861 aggtttcggt ctgcggatac ggaggtcgct gtcgccacga acacgatcga agcggcaacc
     1921 acgccgagca cgtgcagcag cgccggaatg ggacgagcgg gcgcggtcgg ttcggcaggt
     1981 gacgcgctca ctcgccgaag caccagcgac tccggcgcta ccgagctcac cgggacggcg
     2041 ggcgggacgc tgtcccactc cgcgtcgatg agcgaagtgc gttgttcggt ggattgagtc
     2101 atgttcctcg gcgcggaaga aaagcgaacg gtcaggcgtg ccgaggtgag ctggccttcg
     2161 ccttcggctt tgctttggat cgggacttgg tcgtcggcgc gtgcttggcg gtcgggttcg
     2221 gatctttttg gaatttcagc tcgcgtgctt cggcactcgg gccgacgagc tcgtgtgtcg
     2281 gctgcgcggc tgcgccggcg ctcgcgacgg acggaacgcc gctcggcgca ttcgcggact
     2341 ggtcgtggtc agcttgtgaa tgcatcgcga atgccgtgcc cgcgagcgcc atgagcgctc
     2401 cagccgcgcc gatgagcttg agtaaagagc ggcgcgcccg cgtgcgtcgc cgcgcgggcg
     2461 ggagcggcgg cggtgcagat ggggcggcgt cggcgtccgt catgacatcg gcgtcgggca
     2521 aagtgtcgaa gtcacgcgcc gggagccgcg gcggcgacgg ggccaccgcg tgagacgccg
     2581 gtcgacgcga actcggcggg agcggcgggg gtgcggaccg aggcgttgca gagggcggca
     2641 gcgcaggggc cgggcgcgaa gccgaaggtc gaggcggcac cgaaacggga gcgattgagc
     2701 ttggcgcgac cggcaggggc gggggtgctt ggcgagtttt catgggttcc tgctcgaagc
     2761 ttttgcagct ccgatgccag cccatgttgg ctgaaatcat tcgcgttttt ggcgtagggc
     2821 gccgacctgc tgctgccctt gggacgcaga tctgatgcct acaggcatca cctctctttt
     2881 cgctgctgcg ccccgccctt cgcgccctat tcgtcttcgc gtttcagccc gtagcgctga
     2941 agcagacgat gtaggtacat gcgatcgagt ttggccttgc gggacgcgcg gctcacgttg
     3001 ccgcccgccc aagccatgag ctcggtgagg tacgtgcgct cgaagctcgc gatgagcgct
     3061 tccttggccg ttttgaaggg cgcttcgatg ctcacttcgc tctggagctc atgcgccatc
     3121 gcgtcgggcg cggccgaggt tcggagcgca tgcgacggac tggtggcatc ttccaggatc
     3181 acggcgcgct cgacgtaatt gcgcagttcc cgcacgttgc cgggccactc gtgctgggcg
     3241 agtcctgcca agatctgagg cgtgaacaag cgcgcgctgt cggtcgcgcc catgcgctcg
     3301 agcagtgctt gcacgagctc cgggatgtcg tccgcgcgct cgcgcagggg tggcaggcgc
     3361 accgtgaaga cggacaggcg gaaatagagg tcctcgcgaa atcgcccgcg gttgacctcg
     3421 cgctccaagt tgcgattcgt ggcggcgatg acgcgaacgt tgaccttgcg tgcgtcgttc
     3481 tcccccgcgc ggcgcacctc gcggttctcg agcacgcgta agagcttcgg ctgcatttcg
     3541 agcggcatct cgccaatctc gtcgaggaag atggtgccgc ggtccgctgc ctcgaacgct
     3601 cccacgcggt gtcggtcggc gcccgtgaac gcgccgcggg cgtgaccgaa gagctcgctc
     3661 tcgaccagat taggcgagat ggcgccgcaa tccaccgtca agaacggccc cgcgcgacgc
     3721 tggctgcggc gcgcaatttc gctcgccacg agctctttac cggtgccgct ctcgccttga
     3781 acgagcaccg tggcgtcact cgccgcgacc cgctcgagca tgctgaagac ctggcgcatg
     3841 gcgagcgtgc ggccacgaag atcgccgaag ctcgtctgcg gcggcacgcg ggtcaccttc
     3901 tccgggctga gctgcgcgac gcgcaccacc gactcgccga tcgcgatctc gcactcgccg
     3961 ggcggaagga tcgcttcacg cacgcgcacg ccgagcagca gcgtcccgtt cagggactcc
     4021 gtgtcggtga tcgcccactg cccccgctcg agcgtcagca tgcagtggaa ccgcgaaacg
     4081 agtcgatccg tgatgaggag ctcgttgctc gggtgcgatc ccacgcggat ccgctcgccc
     4141 tcgagctcga cggtgcggct cccgaccttt ccgccctcgc gcagcaccgt cacgaggagc
     4201 cgcgggatcg cgaccatggt gcccccgagg ctcgcgcccg tgagcgtcga gctgtcctct
     4261 cccctactcg tacccggaag tgcggggccg gtcctcatcg gtctgttccg agagtatccc
     4321 tttcacgaca gtcgtggtcg agtacactcg tcatctcgtg aaacgggcgt ggagcagctg
     4381 agcgtaccat ggccgtagcg agctatccgg cgtgtgaggt tcttttcgag ctcttctccg
     4441 ctccgcgcgg caaggtgctg ctcggccgcg tcgcgacggg gcgcgaggcg gggcgcgtgg
     4501 tgcgcttgcg cttggtcggc gacagcgtgc cgctccgact gaacgacatc gtgggcaaag
     4561 cgagcactct cacccacccc gacatcgtga agctactcgg catcgtgtgc gacggcagcc
     4621 attactacct cgcgagcgag tacttgcccg ggatctcctt gttcgagctc atcgcgcgcg
     4681 cgcgggctcg gcagcagggg ttcgaactcg cggccgccgt gcacgtcacg tacagcgctt
     4741 tgcgcctggt ggagcaggcg gcggctctgc tcgaggccct gagcttgccc cgcacgcggc
     4801 tcttttacac cgactcgatc tggatcgccg agttcggcga gacactcctc gccgagcccg
     4861 ggctcgcgtc cgagctcggc gcacgcggcg acgacgagag cggcgtgcgc gccgtgcaag
     4921 gcgatatcgt gacggccgcg gtggagctct atcacctcgc gaccggcaaa ctcctgacgc
     4981 acgatctcac ggcagccgtg gagcaagcgc tgcccgaacc gctcgcgcac acgctcacgg
     5041 aagtcttcag ctggagcgac accgaagcat ccgacacggt ctcgagcttc gcccgtgctc
     5101 tcgggcgctt acccgccgag cttcgcggtg acgacgccgg cgtggcccga gcgttacgcc
     5161 tgctcgccgc ggacgtcctg agcgagcgcg aagaaaagct cgccgactat cgccctgaca
     5221 tgggaccggc gatcgacggc cccacacgcg tgtacgcgct gccggacccc gacgctgcgc
     5281 ccgacgagcc gaccgtcgtt ctcgggcggc acctcattgc gcgccggcca gcgctcggcg
     5341 cgcggccggt cgcgagcggc cagccgaaac gagcgctcgt cagggcggcg cagaagccgc
     5401 gagtcgactt agcgagccgc gagacgcccc tggcccccgt cgtgccgcat gacgcaccga
     5461 cttcggcgcg caagacggcg caccgaggct tcgtgttcgt cgcgctcggc ttgttcgcgg
     5521 tgctcgtgct gggtttcgtc gcgcgcactc agccggcgtg ggtgcgcgcg ctcgctgcgc
     5581 gagtgaagct ccgctgagcc gtcggcggag ctcgtcttcg gccttcgtcg ccgatgacct
     5641 cagaccttcg tgccgctgag cgccgcctgc aggcgcgctt cgtcttcgtg cgagagggac
     5701 gtcttgagga cggtgccgcc cgtgccggcg agctcctcga ggactttgtc gggcgtggcc
     5761 ttgcggacga gcacgaagag ggccgagcta ccaggc
//
LOCUS       DATIML010000855         2702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3356773, whole genome shotgun sequence.
ACCESSION   DATIML010000855 DATIML010000000
VERSION     DATIML010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3356773"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VLJ38_14875"
     CDS             complement(<1..356)
                     /locus_tag="VLJ38_14875"
                     /inference="COORDINATES: protein motif:HMM:NF027503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HSU40860.1"
                     /translation="MSIDTRAIETHSTDNRRFKPSPEFSARARIGTLERFNEMYRESL
                     DSPETFWKRETAELVFRKSWSTLSEWKPPFTKWFLGAELNASESCLDKHLKTARRDAP
                     AIVWESEPGETRKLTYA"
     gene            complement(555..821)
                     /gene="rpsT"
                     /locus_tag="VLJ38_14880"
     CDS             complement(555..821)
                     /gene="rpsT"
                     /locus_tag="VLJ38_14880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HSU40861.1"
                     /translation="MANHPSAEKRNRQRIVRTERNRALKSALRTTVKKARAAISAGDA
                     KLAKPLVAAAESALARAASKGVIAKKSASRVTARLAVTGGKLAK"
     gene            complement(1101..2315)
                     /locus_tag="VLJ38_14885"
     CDS             complement(1101..2315)
                     /locus_tag="VLJ38_14885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40862.1"
                     /translation="MSADTASKLVLRAEAALARAELREPDWDALSARIESALGAASST
                     DDSLLLPPLPESVEDGREEIAARETDERESEGPRSQRGDASLAELARAAVARRSSKDA
                     LDLVKASLAIASQSRALPETPRRVEPSATAAVSAELTREREQSTLPPARGQQSSLDTR
                     GPWIGVAIATIGLAAGFGLYLASRAPAASIAASPAPVTAPAVATTAGPLATDKAAAPS
                     ATALAVPHGETAEMLPVEKEALADPMPSAAPAAEHAPAALKAAAAASPPRGTTAANAT
                     RARPEKLVLEEDAAAAAKSSPSKATSSAMRPAELNAANGGMSDRPSTGAAQAAVGAVL
                     GAARSCIAGQPQASSATIVFGSSGEVTGVNVSGPADGTPAAACIKAALGKARVQPFAA
                     PNFSLGVTVRPL"
     gene            complement(2312..>2702)
                     /locus_tag="VLJ38_14890"
     CDS             complement(2312..>2702)
                     /locus_tag="VLJ38_14890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU40863.1"
                     /translation="GRSEPFTWIYRIAVNLSLNAIRARRTTRHSSPPDDPQVESLLLE
                     ARGGGVSPADATLDRELALALIDGLGELSESLRTTLIMVGIDGLSHAEVAKILGCPEG
                     TIAWRVHEARRKLRAYLLGRGHAEEES"
BASE COUNT          343 a          913 c          992 g          454 t
ORIGIN      
        1 gcgtaggtga gcttgcgcgt ctcgcccggc tccgattccc agacgatggc gggcgcgtcg
       61 cgccgcgcgg tcttcaggtg cttgtcgagg cagctttcgc tggcgttgag ctcggcaccg
      121 aggaaccact tggtgaacgg cggcttccac tcgctcagcg tggaccatga cttccggaag
      181 acgagctcgg ccgtctcgcg cttccagaac gtctccggcg agtcgaggct ctcgcggtac
      241 atctcattga agcgttccag tgtgccgata cgagcacgcg ccgaaaactc ggggctcggc
      301 ttgaatctgc ggttgtccgt cgaatgggtc tcgatcgctc gggtgtcgat gctcacgggt
      361 cgcctccggt gcgggcagtc taggccagct cccgagaacc gtactctcgt ttttggctcg
      421 aaagacgggg tcccgcaggc gtgagctcga cgctccggtg ccgcgacgcg cgaactgcgc
      481 cgcacgggtg aaagtggggc gcatatcggc gacaaggcgt ggcgcgcggc cacgccttgg
      541 aagcgcgctc ggcgctactt cgcgagcttg ccgcccgtaa cggcgaggcg agcggtcacg
      601 cgcgaggcag acttcttcgc gatcacgccc ttgctcgcgg cgcgcgcgag ggcgctctcc
      661 gcggcggcga cgagcggctt cgcgagcttg gcgtcaccgg cactgattgc ggcgcgcgcc
      721 ttcttgacgg tcgtgcggag cgcgctcttg agcgcgcgat tgcgctcggt gcggacgatg
      781 cgctgacggt ttcgcttctc ggcggacgga tgattggcca tgacttgttc ctagctcgcc
      841 ttgccgcgct tcgcgtccgg ggccttcgga tcgtagccgt cggggtgaac ggcaaacttg
      901 ggggtgatgc gggcagcgga gcgcttgcgc gcagccgcgg tgctccgcgc gcgaaggtta
      961 cgccgacgtt cggtttgacg agtagaagag accatatcgc aacgctcgaa gcggttaggg
     1021 gcggggacta tgttcgccag ttcagcgctt gtcaaccctg gggccgacct ccggggctcg
     1081 ctcgcgcccg ctgcccggcg tcagaggggt cggaccgtga cgccgaggct gaagttcggc
     1141 gcggcaaacg gctgcacccg ggcttttccg agtgcggctt tgatgcacgc cgcggcgggc
     1201 gtgccgtcgg cggggccgct cacgttcacg cccgtgactt cgccgctcga gccgaacacg
     1261 atggtcgcgc tcgacgcctg cggctgcccg gcgatgcacg agcgcgccgc gccgagcacg
     1321 gcaccgacgg cggcttgcgc cgcgccggtc gagggacggt ccgacatgcc tccgttcgcc
     1381 gcgttgagct cggcgggtcg catcgcgctc gacgtggctt tcgacggcga gctcttcgcc
     1441 gcagccgctg catcttcctc gagcacgagt ttctcgggcc gcgcccgcgt cgcgttcgcg
     1501 gccgtcgtcc cccgcggtgg ggaggccgct gcggcagctt tcagcgcggc cggcgcgtgt
     1561 tcagcggcgg gcgcagctga cggcatgggg tcggccagcg cttctttctc gacaggcaac
     1621 atctccgctg tctcgccgtg cggcaccgcg agcgccgtcg cactgggtgc agcggctttg
     1681 tccgtggcaa gcgggcccgc agtcgtcgct acggcaggtg ccgtgactgg cgcgggtgag
     1741 gccgcaatgc tcgccgccgg agcgcgcgag gccaggtaca aaccgaagcc ggcggcgagc
     1801 ccgatcgtcg cgatggcaac gccgatccac ggcccgcgcg tgtcgagcga gctctgctgg
     1861 ccccgcgcag gcggcagcgt gctctgctcg cgctcgcgcg tgagctcggc cgagacggcc
     1921 gccgtggcgc tcggctcgac gcgacgcggt gtctcgggca aggcgcggct ttgcgaagcg
     1981 atggcgagcg aggccttgac gagatcgagc gcgtctttgc tgctgcggcg tgcgaccgcg
     2041 gcgcgcgcga gctcggcgag ggaagcgtcc ccccgttgcg acctcgggcc ctcggactcg
     2101 cgttcgtccg tctcgcgggc ggcgatctct tcacgcccat cctcgacgct ttcgggcaac
     2161 ggcggcagca gcagactgtc atcggtgctg ctcgccgcgc cgagcgcgct ctcgatccgt
     2221 gccgagagcg cgtcccaatc cggctcgcgc agctcagcgc gcgcgagggc tgcctcggcg
     2281 cgcaagacga gcttcgatgc ggtgtcggcg ctcatgactc ctcctcggcg tggccccggc
     2341 cgagcagata cgctctaagc ttccggcgcg cctcgtgcac gcgccacgcg atggtgccct
     2401 ccgggcaacc gaggatcttg gcgacctcgg cgtgagacag gccgtcgatg ccgaccatga
     2461 tgagcgtcgt gcgcagactt tcgctgagct cgcccaagcc gtcgatgagc gcgagcgcga
     2521 gctcgcggtc gagcgtcgcg tcggcgggac tgacgccgcc gccgcgcgct tcgaggagta
     2581 ggctctccac ttggggatcg tcgggtggcg acgaatggcg cgtggtgcgc cgcgcgcgga
     2641 tggcgttgag cgagagattc acggcgatgc ggtagatcca cgtgaacggc tcgctgcggc
     2701 cg
//
LOCUS       DATIML010000856         1601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5383570, whole genome shotgun sequence.
ACCESSION   DATIML010000856 DATIML010000000
VERSION     DATIML010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5383570"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..799
                     /locus_tag="VLJ38_14895"
     CDS             194..799
                     /locus_tag="VLJ38_14895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HSU40864.1"
                     /translation="MPNQHHAARSTPEAQPVLGQRAKESQPYGTLMRYPLGLSDHARS
                     SSVESLNLLLADTISLRDMYKKHHWQVSGPTFYALHLLFDKHAGEQTELVDKLAERVQ
                     LLGGVAIAMGGDVAELTRVEKPPRGREEVPVQVSRLLEAHEHILTEARTLARQAAEAG
                     DEGTNDLVVSDVIRLNELQVWFVSEHVVDTPLVRAAQSAGS"
     gene            855..1295
                     /locus_tag="VLJ38_14900"
     CDS             855..1295
                     /locus_tag="VLJ38_14900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSU40865.1"
                     /translation="MASISDRDAAQSALGAFRVVRPEEIEWRPFPAFPPAARLAILAG
                     DPERPGPYVIRVRLPHDTKLMPHEHPETRVYTVVSGVFYIGLGERFEPERLTAHGVGS
                     VLVLPGGQRHFHWAKSGEYVTQVNAWGPLGLSYVDPAHDPRRRG"
     gene            complement(1333..>1601)
                     /locus_tag="VLJ38_14905"
     CDS             complement(1333..>1601)
                     /locus_tag="VLJ38_14905"
                     /inference="COORDINATES: protein motif:HMM:NF014229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UBP-type zinc finger domain-containing protein"
                     /protein_id="HSU40866.1"
                     /translation="NPCQHVSARVPRHVHRPTAGCKECLELGSSWVHLRICLNCGHVG
                     CCDDSPNRHATAHYRATRHPLITSGEIDETWAFCYADNQFLSKE"
BASE COUNT          265 a          533 c          535 g          268 t
ORIGIN      
        1 gtgaacatgg cagcccggct cgggattggt tcacagcgct gaagtcgcgc ggaacggcgc
       61 ggccgagccg tgcgaccgaa tttggtcgaa gtggcggttc ttgggcagga gctcgcacgc
      121 acgcttcgag ctcttgcgcg cgctgcggaa cggcacggct ttcgcattcg ccggccgcac
      181 aggagtgacc cacatgccca accagcacca tgcagcgcgc tcgacgcccg aagcccaacc
      241 cgtcctcgga cagcgcgcca aagaatcgca accctacggg acgctcatgc gctatcccct
      301 cggcttgagc gaccacgcgc gctcttcttc ggtggaatca ctgaacctgc tgctcgccga
      361 cacgatttcg ctacgcgaca tgtacaagaa gcaccactgg caagtgtcgg ggccgacctt
      421 ctacgcgctg cacctcttgt tcgacaaaca cgcgggcgag cagaccgagc tcgtggacaa
      481 gctcgccgag cgcgtccagc tcctcggcgg tgttgccatc gcgatgggcg gcgacgtggc
      541 cgagctcacg cgcgtcgaaa agccgccgcg cggccgcgaa gaggtcccgg ttcaggtctc
      601 gagactgctc gaggcgcacg agcacatctt gacggaggcg aggactctgg cgcggcaagc
      661 cgccgaagct ggcgacgagg ggacgaacga tctcgtcgtc agtgacgtga tacgcctgaa
      721 cgagctgcag gtttggttcg tgagcgagca cgtcgtcgat acgccgctcg tccgcgccgc
      781 gcagagcgcc ggctcctgaa cgacaccatc gtacgatggc tcgcgccgtc gcgtgtcgtt
      841 atccatggag aaccatggcg agcatttctg atcgcgacgc cgcgcagtcg gcgctcgggg
      901 cctttcgcgt cgttcgtccg gaggagatcg agtggcgacc gtttcctgcg tttccgccgg
      961 cggccaggct cgccatcctg gcgggtgacc ccgagcgccc cggcccctac gtgatccgcg
     1021 tgcgtctgcc gcacgacacg aagctgatgc cgcacgagca tccggaaacg cgcgtctaca
     1081 ccgtggtttc tggcgtgttc tacatcggcc tcggtgagcg gttcgagccg gagcggctga
     1141 ctgcgcacgg cgtggggagc gtcctcgtgc tgccgggagg gcagcggcat ttccattggg
     1201 cgaaatcggg cgagtacgtc acgcaggtca acgcttgggg tccgctcggg ctcagctacg
     1261 tcgaccccgc gcacgatcca cggcggcgcg gctgagcccg ccgccgagca cgactccgct
     1321 gtaccggcag cctcattctt tcgacagaaa ctggttgtcg gcgtaacaga aggcccaggt
     1381 ttcgtcgatc tcgcccgacg tgatgagcgg gtgccgcgtt gcacggtagt gcgcggtagc
     1441 gtgccggttc ggcgagtcgt cgcaacaccc cacgtggccg caattcaggc agatgcgcag
     1501 gtgcacccag ctcgagccga gctccaggca ttccttgcat ccggccgtgg ggcgatgcac
     1561 gtgccggggc actctcgcgc tgacgtgctg acagggattc g
//
LOCUS       DATIML010000857         2604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3931792, whole genome shotgun sequence.
ACCESSION   DATIML010000857 DATIML010000000
VERSION     DATIML010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3931792"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..794
                     /gene="rplC"
                     /locus_tag="VLJ38_14910"
     CDS             129..794
                     /gene="rplC"
                     /locus_tag="VLJ38_14910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HSU40867.1"
                     /translation="MNQHPGVIGRKLGMTQVFGEDGTVTACTVVEAASVVVAKRTLDK
                     DGYSALVVGIDELSEKRANKPGAAFFKKANVTPKQKLRELRCSPEFAASVEVGQPLKV
                     ESLFEEGQLVDVQGVTRGRGFTGVIRRHNFKGNRMTHGTHEYRRHGGSIGTRMTPGRV
                     KLGMKMPGHYGNETVSVLNQRVAKLVPGDNLVLVAGAIPGPRGCLVSVRGAIKRSGGK
                     KAA"
     gene            1007..2149
                     /locus_tag="VLJ38_14915"
     CDS             1007..2149
                     /locus_tag="VLJ38_14915"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU40868.1"
                     /translation="MDRRRAGGLVVALIVGVVGVRVAASFQRALPEAAEGSTTVHVGK
                     NEVALARDAPEWKSVHLGQAKPLGQRWTDTFPARFKIDETRASRIGSPLQGRVTKVFV
                     ELGQTVKAGTPLLAIASPDIAGFRAERQKAKVDLDVAHAQYDRVRAMVDARALPGKDE
                     LASDQQLKQAELSLSLAQSKLESLRVSLTRDNEFNIVAPRDGCVIDKQVVLAQQVSPN
                     DSMITIADLENVWVVAELFEADANGIAAGTTARVTSPSLPGYAAEAKVEMVSFVADPE
                     RHSIAVRAKLPNPTREIRPNAYAQVSFRADVTDGTVGIAASAVVSDGQKQYVYVQREP
                     GTFVRREVVVASTHGGQAAVVAGLKTGEIVVERGSALLDNQIALSS"
     gene            2159..>2604
                     /locus_tag="VLJ38_14920"
     CDS             2159..>2604
                     /locus_tag="VLJ38_14920"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU40869.1"
                     /translation="MLEALLKFSLKNRLAAFVLALVVGGWGLYAYKNLTIEAFPDPTD
                     TQVQVITLFSGQPAEEVERRVSLPLERALNGTPHLTGVRSISLFGLSFVTLTFDDKAD
                     LLQARQQTIERLSQAELPQGVQPSLGPMATPIGEVFRYTLEGQGADP"
BASE COUNT          445 a          868 c          881 g          410 t
ORIGIN      
        1 accgcggccc ggtaacgctg ccgcaagcgg cgtgcgacgg gccggtctcc ggttcgacgc
       61 cggcgggtcg ccttttccta tccgcgaacc ttgacgacac ccggggctgg cggtaagagc
      121 gccggcccat gaaccagcac cccggcgtga tcggcaggaa gctcggaatg acccaggttt
      181 tcggcgagga cggtaccgtc actgcctgca cggtcgtcga ggccgcgagc gtcgtcgtcg
      241 cgaagcgcac gctcgacaag gatggctaca gcgcgctcgt cgtcggcatc gacgagttgt
      301 cggagaagcg cgcgaacaag ccgggcgccg cgttcttcaa gaaggccaac gtaacgccga
      361 agcagaagct ccgcgagctg cgttgctcgc ccgagttcgc cgcgagcgtc gaggtgggtc
      421 agccgctcaa ggtcgagagc ctgttcgagg agggccagct ggtcgacgtg caaggcgtca
      481 cgcgcggccg cggcttcacc ggcgtcatcc gccgtcacaa cttcaagggc aaccgcatga
      541 cgcacggtac ccacgaatac cgccgccacg gcggctcgat cggtacgcgc atgacccccg
      601 gtcgcgtgaa gctcggcatg aagatgccgg gtcactacgg caacgagacg gtcagcgtgt
      661 tgaaccagcg cgtcgccaag ctcgtgccgg gcgacaacct cgtgctcgtc gcgggcgcga
      721 tcccgggacc gcgcggctgc ctcgtcagcg tgcgcggcgc gatcaagcgc agcggcggca
      781 agaaagccgc gtagctctgc gttctgtcga gctcgtcggg cgagctctgg gcggaagtcg
      841 cacctcacat tttttttctg tgggttgcac gtcgcgttcg aatacacttc cgctgggttt
      901 cgtcgcaccc acgtagaccc cgaaaatcgc gcgcgttccg cggcctgctg gaacggcacg
      961 cttcctgctc aacgcagcgg cactgatggc cgaagctgtg tttgcgttgg acagaaggcg
     1021 cgcgggcggg ctcgtcgtcg cgctgatcgt gggagtcgtc ggcgttcgcg ttgcagcgtc
     1081 ctttcagcga gcgctgcccg aagccgccga gggaagtacg acggttcacg tcggtaagaa
     1141 cgaggtcgcg ctcgctcggg atgcaccgga atggaagagc gtgcacctcg gccaagcgaa
     1201 gccgctcggc cagcgctgga ccgacacgtt ccccgcgcgc ttcaagatcg acgagacgcg
     1261 ggcgagccgc atcggttcgc cgcttcaggg acgcgttacg aaagtcttcg tcgagctcgg
     1321 acaaacggtc aaagcgggca cgccgctcct cgcgatcgcg agccccgaca tcgcgggttt
     1381 ccgcgccgaa cggcagaaag ccaaggtgga tctcgacgtg gcccacgcgc agtacgaccg
     1441 cgtgcgcgcc atggtcgatg cgcgcgcgct gcccggtaaa gacgagctcg cctccgatca
     1501 gcagctgaaa caagccgagc tcagcctctc gctcgcgcag agcaagctcg aatcgctccg
     1561 cgtttcgctc acgcgcgaca acgaattcaa catcgtcgcg ccgcgcgacg gctgcgtcat
     1621 cgacaaacaa gtggttttag cgcagcaggt ctcgccgaat gacagcatga tcacgatcgc
     1681 cgacctcgag aacgtctggg tcgtggccga gctcttcgaa gcggacgcga acggcattgc
     1741 cgcgggcacg acggcgcgcg tcacgagccc gtcgttgccg ggctacgcag cggaagccaa
     1801 ggtcgagatg gtctcgttcg tcgcggatcc ggagcggcac tcgattgcgg tgcgcgcgaa
     1861 gttgccgaac cccacgcgcg agatccgccc gaacgcctac gcgcaggtga gcttccgcgc
     1921 ggacgtgacg gacggcaccg tgggcatcgc ggcctcggcg gtcgtctccg acgggcagaa
     1981 gcaatacgtt tacgtccagc gcgagccggg cactttcgtg cggcgcgagg tggtggtcgc
     2041 ctcgacgcac ggcgggcagg cggccgtcgt tgcgggcctg aagacgggcg agatcgtcgt
     2101 cgagcgcggc tcggcgctgc tcgacaacca gatcgctctc tcgagctgag ctcccgccat
     2161 gcttgaagcg ctcctcaagt tctcgctgaa aaaccgcctg gcggcgttcg tgctcgcgct
     2221 cgtcgtgggc ggctggggac tctacgccta caagaacctg acgatcgagg cgttccccga
     2281 tcctaccgac acccaggtcc aggtcatcac gctcttctcg ggccagcctg cggaagaagt
     2341 ggaacgccgc gtctcgttgc cgctggagcg cgcgctcaac ggcacgccgc acctgacggg
     2401 cgtgcgcagc atctcgctct tcgggctctc gttcgtgacg ctcacgttcg acgacaaggc
     2461 cgaccttttg caggcgcggc aacagacgat tgagcggctg agccaagccg agctgccgca
     2521 gggcgtgcag ccgtcgctcg ggccgatggc gacgccgatc ggcgaagttt tccgctacac
     2581 gctcgagggg cagggcgccg atcc
//
LOCUS       DATIML010000858         3318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1628385, whole genome shotgun sequence.
ACCESSION   DATIML010000858 DATIML010000000
VERSION     DATIML010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3318
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628385"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..657
                     /locus_tag="VLJ38_14925"
     CDS             <1..657
                     /locus_tag="VLJ38_14925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HSU40870.1"
                     /translation="ENMARSKHTAAHFNYVEECDVGKLIELRERARPHAERAGVKLTF
                     LPFFVKAVVAALKLHPRLNAVVDEQAMELVVRKTYDIGIAMATEAGLMVPVVREADRL
                     SILEISREIDRLAVAAREGKSQREDLGGSTFTVSSLGKLGGFIAPPIINYPEVGIMGV
                     HAIKKKPVVRGNEIVVGDVMMLSFSFDHRIIDGDVGAVFAQEIVNYLETPDRLLVEMS
                     "
     gene            804..1847
                     /locus_tag="VLJ38_14930"
     CDS             804..1847
                     /locus_tag="VLJ38_14930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40871.1"
                     /translation="MQRSCGIERAVGILATLLIGSMASPVAAQTEASEPTPEQVRAAA
                     EAFDLGRQSYKDGRFAEAAEQFERADASAPNATALELAIRARDKAGDLDRAGTLASLA
                     LSLYPNDENISKIAPDVIERAGSELYELTVTCSEPCEITDGNKVVHGSAATRRTLFLS
                     AGTHNLRAGFGEGRALSKPVEAMPGSSGVVEFSLEPKDGAEPGVAPVATPEQPLNPDE
                     DRGVQKEHHGVSPLVFWAGVGATGVAGIVTIWSGIDTVNNPGADKVRTECAPHDENCK
                     YYKDGRSAQTRTNVLIGVTSVLGVATAAVGLFAIDWGKSSHPTTEEGRSKPHFTPYVG
                     WANGPALGARGAF"
     gene            1847..3307
                     /locus_tag="VLJ38_14935"
     CDS             1847..3307
                     /locus_tag="VLJ38_14935"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40872.1"
                     /translation="MVATKLFEPGAGRMRVDRYELVGEIASGGMATVYLARLGGVGGF
                     QRFVAMKRLHPHLQNEKEFVEMFLDEARLSAGIHHPNVVSILEVGASPVGYYLVMEYV
                     EGDTLARILARAAGKGDRIPTPIALRIVIDSLQGLNAAHELKDDRGVSVELVHRDVSP
                     QNILVGIDGVTRITDFGVARATSRLSSTRVGQLKGKLAYMAPEQAQGEGIIDRRADVF
                     SAGVLLWETLAGKRLFKAETEVATLQRVMNEPIPDLARVAPHLSSELCAVVNQALERD
                     PDQRYATAGQFADALESAAATRDGIAPSRDVAAFVKQILGEEVEQQREAVRAWLAKSE
                     PTHPPPLPLVTPSSVSVGAMSIPDGVQHGTRAAGVDRAGRRLAVPLAALGAALAALAA
                     VVVLWFGHRDHAPAPLPTIVVAARPPEPAPLPSPPPAPVDTEVLPVTTPDALPSAAPA
                     ESAAPPPAKAPPILRQSRPQKKKGGGEDLNVRNPYR"
BASE COUNT          568 a         1113 c         1118 g          519 t
ORIGIN      
        1 gagaacatgg cgcggtccaa gcacaccgcg gcccatttca actacgtcga ggagtgcgac
       61 gtcggcaagc tcatcgagct ccgcgaacgc gcgcgcccgc acgccgaacg cgccggcgtc
      121 aagctcacgt tcctgccgtt cttcgtgaag gcagtcgtgg cggcgctcaa gctccacccg
      181 cgcctcaacg ccgtcgtcga cgagcaggcg atggagctcg tcgtgaggaa gacctacgac
      241 atcggaatcg cgatggcgac ggaagcgggc ctcatggttc cggtcgtgcg cgaggccgat
      301 cggctgagca tcctcgagat cagcagggag atcgatcgcc tcgccgtcgc cgctcgagaa
      361 ggtaagtcgc agcgcgagga tctcggcggt tcgaccttca cggtgagctc gctcggtaaa
      421 ctcggcggct tcatcgctcc gcccatcatc aactacccgg aagtcgggat catgggcgtc
      481 cacgccatca agaagaagcc ggtcgtgcgc ggcaacgaaa tcgtcgtcgg cgacgtgatg
      541 atgctctcct tctccttcga ccaccgcatc atcgacggcg acgtgggcgc ggtgttcgcg
      601 caggagatcg tgaactatct cgagactccc gaccggctct tggtcgagat gtcgtgagtt
      661 tcggccgcgc gtggccgagc caaagaggag gggctcgagg ggcgggcagc ggcttttcgc
      721 gcgggttcgc ctacatgggc ttacatggac caagagtgaa acactcgctt gcgcgagcga
      781 tcggggctag tcttggttgg atcgtgcaac gttcctgcgg catcgagcgc gccgtgggca
      841 ttctcgccac gctactcatc ggtagcatgg caagtcccgt agcggcgcaa accgaggcgt
      901 cagagccgac gccggagcag gtccgtgccg cggccgaagc cttcgatctc ggccgccaat
      961 cttacaagga cggtcgcttc gccgaggcag ccgagcaatt cgagcgtgct gacgcgagcg
     1021 cgccgaatgc gacggccctg gagcttgcga ttcgcgcgcg cgacaaggcg ggcgatctcg
     1081 atcgcgccgg cacgctcgct tcgctcgcgt tgagcctgta cccgaacgac gagaacatct
     1141 cgaaaatcgc gccggacgtg atcgagcgcg cgggctcgga gctctacgag cttaccgtga
     1201 cgtgcagcga gccctgcgag atcaccgacg ggaacaaagt cgtgcacggc agcgccgcca
     1261 ctcggcggac gctattcttg agcgccggca cgcacaatct gcgcgccggg ttcggtgaag
     1321 gccgcgcgct ttcgaagcct gtggaggcga tgcctggctc gagcggtgtc gtcgaattct
     1381 cgctggaacc gaaggacggt gccgagcccg gggtagcacc cgtagcgact ccggagcagc
     1441 cgttaaaccc ggacgaagat cgcggcgtgc aaaaggagca tcacggcgtc tcgccgctcg
     1501 tcttctgggc aggcgtcggc gcgacgggcg tcgccggcat cgtcaccatc tggagcggca
     1561 tcgacacggt gaacaatccc ggcgccgata aggttcgaac cgagtgcgcg ccgcacgacg
     1621 agaactgcaa gtactacaag gacggccgtt ccgcccagac gcggacgaac gtcctcatcg
     1681 gcgtcacgag cgtgctcggt gtcgcgacgg cggccgtggg tctattcgcg atcgactggg
     1741 gtaagtcgtc gcacccgacg acggaagaag gtcgtagcaa gccgcacttc acgccctacg
     1801 tgggctgggc aaacgggccg gcgctcggcg cgcggggcgc attctgatgg tcgcgaccaa
     1861 gctcttcgaa cccggcgccg gtcgtatgcg cgtcgatcgt tacgagctcg tcggcgaaat
     1921 cgcctccggg ggcatggcga ccgtttacct cgcccggctc ggcggcgtgg gcggcttcca
     1981 gcgcttcgtc gcgatgaagc gtctgcaccc gcacctgcaa aacgagaagg agttcgtcga
     2041 gatgttcctc gacgaagctc gactctccgc gggcatccat cacccgaacg tcgtttcgat
     2101 cctcgaagta ggcgcgagcc ccgtcggcta ctacctcgtg atggagtacg tggagggcga
     2161 cacgctcgcg cgcattttgg cgcgcgcagc cggcaagggc gaccgcatcc cgacgccgat
     2221 cgccctgcgc atcgtgatcg actcgctcca ggggctcaac gccgcgcacg agctcaagga
     2281 cgacaggggc gtgagcgtcg agctcgtcca tcgcgatgtt tccccgcaaa acatcctggt
     2341 cggcatcgac ggcgttacgc gcatcaccga tttcggtgtc gcgcgcgcga cgagccgatt
     2401 gtcttcgacg cgcgtgggcc agctcaaggg caagctcgcg tacatggcgc ccgagcaggc
     2461 gcaaggcgag ggcatcatcg atcgccgcgc cgacgtgttc tcggcgggcg tgctcttgtg
     2521 ggagacgctc gcgggcaagc ggctgttcaa ggcggagacc gaagtcgcga cgctccagcg
     2581 cgtcatgaac gagccgatcc cggacctggc gcgcgtcgcg ccgcacctga gctccgagct
     2641 ctgtgccgtg gtcaaccagg cgctcgagcg cgatcccgac cagcgttacg cgacggcggg
     2701 acaattcgca gacgctctcg agagcgcggc ggccacgcgt gacggcatcg cgccgtcacg
     2761 cgacgtcgcc gccttcgtca agcagatact cggcgaggag gtcgagcagc agcgcgaagc
     2821 cgtgcgcgcc tggctcgcca agagcgagcc cacgcaccca ccgccattgc cgctcgtcac
     2881 gccctcgagc gtctcggtcg gcgcgatgtc gatcccagac ggtgttcagc atgggacccg
     2941 agctgcggga gtcgaccgcg cgggtcggcg cctcgcggtt cccctcgcgg cgctcggcgc
     3001 ggcgcttgcg gcgctcgcgg ccgtggtggt gctctggttt gggcatcgcg atcacgcacc
     3061 agccccgctt cccaccatcg tggttgctgc gcggcctccc gaacccgcgc cgcttccttc
     3121 gcctccgccc gcgccggttg acacggaggt cctgcccgtc acgacgcctg acgcgctccc
     3181 gtccgccgca ccggccgaga gcgcggcgcc cccgccggcg aaggcccctc cgattctcag
     3241 acagagccgc ccgcaaaaga agaagggcgg gggggaggac ctgaacgtga gaaatccgta
     3301 caggtaagag acattccg
//
LOCUS       DATIML010000859         2514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2490863, whole genome shotgun sequence.
ACCESSION   DATIML010000859 DATIML010000000
VERSION     DATIML010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2490863"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VLJ38_14940"
     CDS             complement(<1..335)
                     /locus_tag="VLJ38_14940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40873.1"
                     /translation="MLARFLLVPVLLLLVGCGSPAAPAAPAGPSSRALRLGSTPWVPF
                     TAEEGQPRVAAFLVERALARAGYEAHTTIVPDGTLTKALEDGRFDGSAALWPSEDRAA
                     FLLYSKPYL"
     gene            649..>2514
                     /locus_tag="VLJ38_14945"
     CDS             649..>2514
                     /locus_tag="VLJ38_14945"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE3 domain-containing protein"
                     /protein_id="HSU40874.1"
                     /translation="MSDANVTRPGRRKRVGGALPTRTLVGFVTAVIAVLAMASFSYWS
                     LAEGTRSGQRVAQTLEAVSHLQAVLSSLKDAETGQRGYLLTGTESYLDPFANAEQTLP
                     NEIARSRRALADKADQLRRLDLVERLASDKLSELRGTVELRRAGKAEEALEVVRTNRG
                     REIMKRLRSVVAEMMANEQGDLEARNQSYARASALSMLVTAGGSALLLVLIIVAANMS
                     ARDFSEQAAQAWLRTGQSELAVGLQGEQSVATIGGGVASFLAKYLDAQLAAVYFAPRR
                     SEPELIGSWGLSPAATTATRGAGGLTEQVLKDNRLLHVREVPDDFFAVSTGLGERKPR
                     ELVVMPVTADAVPNGVIELGFFRTLDRTELDFLRTVADAIGTAFRSAKYRADVQRLLE
                     ETQRQAEELQTQQEELRVSNEELEQQTRTLEESQARLLNQQAELEEINAQLEEHTQSL
                     EKQRAELMRAQVELERASAYKSEFLANMSHELRTPLNSSLILAKLLVDNRTGNLSEEQ
                     IKFAQTIYSAGNDLLTLINDILDLSRIEAGKLDVRPESVPLARLLEELSNGFQPIAKD
                     RSLEFSITQEKGLPSALYTDPVRLQQILKNLLSNAFKFTERGGVSVHVRRVQGATL"
BASE COUNT          443 a          856 c          826 g          389 t
ORIGIN      
        1 tcgaggtacg gcttcgagta cagaagaaac gccgcgcgat cctcgctcgg ccagagcgcc
       61 gccgagccgt cgaagcgtcc gtcttcgagc gctttggtga gcgtgccgtc cggcacgatc
      121 gtcgtgtgcg cttcatagcc cgcgcgtgct agcgcgcgct cgacgaggaa ggcggcgacg
      181 cgcggctgtc cttcttccgc cgtgaacggc acccacggcg tcgagccgag ccggagcgcg
      241 cgcgagctcg gcccggcagg tgcggcgggc gcagccggcg agccgcagcc gaccagcagc
      301 agcagaacag ggacgaggag aaagcgcgcg agcatgaggc gccttctagt cgcgcccacc
      361 ccgcgtcaca acgagcaagc gtcgcgacac gccccaaagc gacatttcgc tacgccggac
      421 cgcgggtgat tccggtgtga cccgccgaca tgtgctgcaa ttctccacgc tttccggcgt
      481 gctgctctcc ttccgctgtg gcacgtggtt tgcgtaaccg ccaacgccaa ccaggagcca
      541 ggccatcatc attcgtgctt tccgtcgact tggcctcctc ccgcgcgcgc gtcttcgtac
      601 cgaagccgcg acgtcgccca ctcgcgttcg aagcagcgct ggtgggacgt gagcgacgca
      661 aacgtgacgc ggcccggccg gcgtaagcgt gtcggcggtg cactgccgac tcggacgctc
      721 gtcggcttcg tcacggccgt catcgcagtc ctcgccatgg cgagcttttc ttactggtcg
      781 ctcgccgaag gaacgcggag tggccagcgt gtcgcgcaga cgctcgaagc cgtctcgcac
      841 ttgcaagcgg tgctctcgtc gctcaaggac gcggaaaccg ggcagcgcgg ctacctcttg
      901 accgggacgg agtcgtatct cgatcccttc gcgaacgccg agcaaaccct gccgaacgag
      961 attgcgcggt cccggcgtgc gctcgccgat aaagccgatc agctgcgtcg tctcgacctc
     1021 gtcgagcggc tggcgagcga caagttgagc gagctccgcg gcacggtcga gctccgtcgg
     1081 gccgggaaag cggaggaggc gctcgaggtc gtccgcacga accgcgggcg ggagatcatg
     1141 aaacggctgc gctcggtcgt cgccgaaatg atggcgaacg agcagggcga tctggaagcg
     1201 cgcaatcaat cctacgcgcg cgcctccgcg ctttcgatgc tcgtcacggc tggaggctcg
     1261 gcgctgctgc tcgtgctcat catcgtcgcg gccaacatgt cggcgcgcga tttcagcgag
     1321 caagccgcgc aggcgtggct ccggacgggc cagagcgagc tcgcggtcgg gctccagggc
     1381 gagcagagcg tcgcgaccat cggcggaggc gtcgcgagct ttctcgccaa gtacctcgac
     1441 gcacaactgg cggccgtgta cttcgcgccg cggcggagcg agcccgagct catcggttct
     1501 tggggcctgt cgccggctgc tacgacggca acgcgcggcg cgggcggtct caccgagcag
     1561 gtgctcaagg acaaccggct cctccacgtc cgcgaggtgc cggacgattt cttcgccgtg
     1621 agcaccgggc tcggtgagcg caagccgcgc gagctcgtgg tcatgcccgt cacggccgac
     1681 gccgtgccga acggcgtgat cgagctcggg ttctttcgca cgctcgaccg cacggagctc
     1741 gatttcctgc gcaccgtcgc cgacgccatc ggcacggcgt tccgttcggc gaagtaccgc
     1801 gccgacgtcc agcgcctgct cgaggaaacc caacgtcaag ccgaggagct ccagacgcaa
     1861 caggaggagc tccgcgtcag caacgaagag ctcgagcaac aaacgcgcac gctcgaggag
     1921 tcacaggcgc gacttctcaa ccaacaggcg gagctcgaag agatcaacgc gcagctcgag
     1981 gagcacacgc agtcgctcga aaagcagcgc gccgagctca tgcgcgccca agtcgagctc
     2041 gaacgggcga gcgcctacaa gtccgagttc ctcgcgaaca tgtcgcacga gctgcgcacg
     2101 ccgctcaaca gctcgctcat cctcgcgaag ctcctggtcg acaaccgcac cgggaacttg
     2161 agcgaagagc agatcaagtt cgcgcaaacc atctattcgg cgggcaacga ccttttgacg
     2221 ctgatcaacg acatcctcga cctgtcgcgg atcgaggccg gcaagctcga cgtgcggccg
     2281 gagagcgtgc cgctcgctcg gctgctcgaa gagctttcga atggctttca gccgatcgcc
     2341 aaggatcgca gcctcgagtt ttcgatcacg caagagaagg gcttgccgag cgcgctttac
     2401 accgatcccg tgcgcctgca gcagattttg aagaatctgc tttcgaacgc cttcaagttc
     2461 accgagcgcg gcggcgtgtc ggtccacgtg cgccgcgtgc aaggcgcgac gctc
//
LOCUS       DATIML010000860         3922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_181557, whole genome shotgun sequence.
ACCESSION   DATIML010000860 DATIML010000000
VERSION     DATIML010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181557"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1214)
                     /locus_tag="VLJ38_14950"
     CDS             complement(<1..1214)
                     /locus_tag="VLJ38_14950"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU40875.1"
                     /translation="MPARPLTSTTTQGNYRVFSKYRLLARLGSGGMAEVFLAVTGNPA
                     GFNKLQVLKVLRSDLPEQERADFARMFHDEARLAARLSHPNIVQSHEVGSEEGHDFIA
                     MEFLEGQPLSHLQERSWEADGAEFTLEMQLQVLCCVLEALDYAHGLRDYDGRVLHIVH
                     RDVSPQNIFVTYAGHTKLVDFGIAKTLESNKTRAGVVKGKVPYMSPEQVLGGAIDHRA
                     DLFSVGVILWEAVARRHMHGTASVYEILRSVVQGSLPSLREAAPNVPPELERIVKRAL
                     SRRPEDRYADASSFRDALLAFLDTRKRVSTRELGDRVSTMFAKERAEIAEVIRQAMSE
                     VNDAEAGYESGRINAVHLLPTLQFLAAQASSAPKSSPITAPTTAPSLLPEGNAMSTDP
                     PQRTSATAADNV"
     gene            1664..2530
                     /locus_tag="VLJ38_14955"
     CDS             1664..2530
                     /locus_tag="VLJ38_14955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40876.1"
                     /translation="MQKPPPSTQVQKSSAERGVNPCNTPDPGFGAYDHWVKTGSALVL
                     LPQRGMVNAAGEFDVVFHFHGHEPARKEWVQVMHGVVLVGMTLGIGSGAYENAFRDPA
                     AFERLLKSIEATVAEHSGRKAAHARRIALSSWSAGYGAVEEILNQPLGRERVDSVILL
                     DGLHCDYAGDGFVKTTLDPFVRFAHEAADGKRLMVVSHSSIIPPGYASTTETANFLIH
                     ELGGRPRPARARASDPMGLELVSRYDAGGFHVRGYAGNAELDHCAQIGLYRDILKVHL
                     APRWSPPRAARH"
     gene            2514..3452
                     /locus_tag="VLJ38_14960"
     CDS             2514..3452
                     /locus_tag="VLJ38_14960"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSU40877.1"
                     /translation="MPRDTEPKPPPVAFKDGTHIAAAAGPLDRLLRAAFPGASWNAVR
                     GLIESGKVAVDGAVVRETNRAVRAGSEMRVSMRAPRARENALPPELIAHLDAHVVVVR
                     KPAGISTVPYDEDETGTLSELVEAALKKKGGGHAPLGIVHRIDKETSGLVVFSRNLAA
                     LRGLKQQFRVHSVKRRYLAIAHGQVTSGTLRSQLVKDRGDGRRGSTENPNLGRDAITH
                     VRVLEPLRGATLIECRLETGRTHQIRIHLSEDGHPLLGERVYTKNFSGPLIPAPRLML
                     HAFELGFEHPATGAPLHFEEPMPDDMRGVLERLRGR"
     gene            complement(3516..>3922)
                     /locus_tag="VLJ38_14965"
     CDS             complement(3516..>3922)
                     /locus_tag="VLJ38_14965"
                     /inference="COORDINATES: protein motif:HMM:NF016883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016756 - glutathione
                     gamma-glutamylcysteinyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA];
                     GO_process: GO:0046938 - phytochelatin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phytochelatin synthase family protein"
                     /protein_id="HSU40878.1"
                     /translation="LSSDERSILEGTGKCWSGMCWGGLSLDELAGIARRNTKHQVTVL
                     RGLSYDDFRALLPRFNEPARRYIANFQRGMLMGKGTGHFSPIGGYLAEQDLVFVLDVN
                     AKWKPWLVEPKRLFDAIDTTSSDGKRGLLVLE"
BASE COUNT          689 a         1358 c         1230 g          645 t
ORIGIN      
        1 ctcacgttgt ccgctgctgt cgcggaggtc ctttgcggcg gatcagtgga catcgcattc
       61 ccctccggca ggaggctcgg cgccgtcgtc ggggccgtga tgggcgacga cttgggcgca
      121 ctcgacgcct gcgccgcgag aaactgcaaa gtcggcagga gatggacggc gttgatgcgc
      181 cccgattcgt agcccgcctc ggcgtcgttc acctcgctca tggcctggcg aatgacttcg
      241 gcgatctcgg cgcgctcttt ggcgaacatc gtagaaacgc ggtccccgag ctcacgcgtg
      301 ctcactcgct tgcgcgtgtc gaggaacgcg agcaaagcgt cgcgaaagga gctcgcgtcg
      361 gcgtagcgat cctccggccg gcgcgagagc gcgcgcttca cgatgcgctc gagctcggga
      421 ggtacgttcg gagcggcttc gcgcaagctc ggcagcgaac cctgcacgac gctgcgcaag
      481 atctcgtaca ccgacgccgt gccgtgcatg tgccggcgag ccaccgcttc ccacaaaatc
      541 acgccgacgc tgaacaaatc cgcgcgatga tcgatggcgc cgcccagcac ctgctcgggc
      601 gacatgtacg gcaccttgcc tttgaccact ccagcgcgcg tcttgttcga ctcgagcgtc
      661 ttggcgatgc cgaagtccac gagcttggta tgaccggcgt aggtgacgaa aatgttttga
      721 ggggaaacat cacgatggac gatgtgaagc acgcgcccgt cgtaatcacg taacccgtga
      781 gcgtaatcga gcgcctcgag cacgcagcag agcacctgca gctgcatctc gagcgtgaac
      841 tcggcgccgt cggcttccca cgagcgctct tgcaggtggc tcagcggctg cccttccaag
      901 aattccatcg cgatgaagtc gtggccctct tcggacccga cctcgtgcga ctggacgatg
      961 ttcggatggc tcaggcgcgc cgcgaggcgt gcctcgtcgt ggaacatgcg cgcgaagtcc
     1021 gcacgctctt gctcgggcag atccgagcgg agcaccttca gcacctgcag cttgttgaat
     1081 ccggccgggt tgccggtcac ggccaggaaa acctcggcca tgccgccgct acccaggcgc
     1141 gccagcaggc ggtatttgga gaaaacgcgg tagttcccct gggttgtcgt cgaggtgagc
     1201 ggcctggccg gcactggact aaaccgtcct cccgcggtcg aagctccgcc cacaccagga
     1261 cctcgtggcg gcaaggaacc aggattttgg cgggtgctga tggtcgcctc ctcgcggacc
     1321 ccgagccagc agcatgcccg acccggacgg ccagtctaac acgcggcgcc ggagagaacg
     1381 cgagcgcact ttgagctcag gaccaatacg agcgaccatg agcgcaacct ttcgggggac
     1441 gggcccccac gtgccttgga ctcggcgggc gaaggcgctt cacttgaacc acgtggcgat
     1501 tcgcgaaaag actctcggtg tggcgcattg ccctcgacgc tggccctggc actccgaggg
     1561 gtcgctcggt ccatgccgcg tcgcgtcgct cgtggcgttg tgtgtggcgg ggttcggaac
     1621 cagtgcggcg gctcgcgcgc cagaaacagg cagtcgttgg ttcatgcaga agccgccgcc
     1681 gtccacgcag gtgcaaaagt cgtccgccga gcgcggcgtg aacccctgca acacgcccga
     1741 tccgggtttc ggcgcctatg accattgggt caagacgggg tcggcgctcg tgctcttgcc
     1801 gcagcggggg atggtcaatg ccgcgggcga attcgacgtg gtctttcact ttcacggcca
     1861 cgagcccgcg cgcaaggagt gggtgcaggt gatgcacggc gtcgtgctcg tgggaatgac
     1921 actcggcatt ggctccggtg cttacgaaaa tgccttccgc gatccggctg ctttcgagcg
     1981 gttgctgaag agcatcgaag cgacggtggc ggagcacagc ggccgtaagg cagcgcacgc
     2041 gcgtcgcatc gcgctgagct cgtggagcgc gggttacggc gccgtcgagg agatcctgaa
     2101 tcagccgctc gggcgcgagc gcgtcgacag cgtcattttg ctcgacggcc tgcattgcga
     2161 ctacgcgggt gacggcttcg tcaagacgac gctcgacccg ttcgtacgct tcgcccacga
     2221 agccgccgac ggcaagcgcc tcatggtcgt gagccactct tcgatcatcc cgccgggtta
     2281 cgcctcgacg acggaaacgg ccaattttct catccacgag ctcggtggcc ggccgcgccc
     2341 cgctcgagcg cgcgcgagtg acccgatggg cctcgagctc gtctcccgtt acgacgcggg
     2401 cggctttcac gtgcgcggct acgccggtaa cgccgagctc gaccactgcg cgcagattgg
     2461 cctttaccgc gacatcctca aggtgcatct agcgccgcgc tggagcccac cgcgtgccgc
     2521 gcgacactga accgaaacca ccgcccgtcg cgttcaaaga cgggacgcac attgcggccg
     2581 cggcgggtcc gctcgatcgt ttgctgcgcg cggcgtttcc gggcgcgagt tggaacgccg
     2641 tgcgcggctt gatcgagagc ggcaaagtcg cggtcgacgg cgccgtcgtg cgcgaaacga
     2701 accgcgccgt gcgcgccggc agcgagatgc gcgtcagcat gcgcgccccg cgtgcgcgag
     2761 aaaatgcgct cccgcccgag ctcatcgcgc acctcgatgc gcacgtcgtc gtcgtgcgca
     2821 aaccggccgg catcagcacc gtgccgtacg acgaagacga aacggggacg ctttcggagc
     2881 tcgtcgaagc cgcgctcaaa aaaaagggcg gcgggcacgc gccgctcggc atcgtccacc
     2941 gcatcgacaa agaaacgagc ggcctcgtcg tcttttcgcg caacctcgcc gccctgcgcg
     3001 gcctcaaaca acaattccgc gtccacagcg tcaagcgccg ctacctcgcc atcgctcacg
     3061 gccaagtgac gtccggcacc ctgcgttcgc agctcgtcaa agatcgcggc gacggccgtc
     3121 gcggctccac cgaaaatccg aacctcggcc gcgacgccat cacccacgtc cgcgtcctcg
     3181 aacccctgcg cggcgcgacc ctcatcgaat gccgcctcga aacgggccga acgcaccaaa
     3241 tccgcatcca cctctccgaa gacggccatc cgttactcgg cgaacgcgtt tacacgaaga
     3301 acttcagcgg cccgctcatc ccggcgccgc gactcatgct gcacgccttc gagctcggct
     3361 tcgagcatcc cgcgacgggc gcaccgctgc acttcgaaga gccgatgccg gacgacatgc
     3421 gtggcgtgct cgaacggctg cgcggacgct gacgaacggc gacgtacgtc gtgcggcgtc
     3481 gtgttacggc ggcgtggcgt cgccgtacgt cgcgctcatt cgagcaccaa aagcccgcgt
     3541 ttcccgtcgc tcgacgtcgt atcgatcgcg tcgaacagtc gtttcggctc cacgagccac
     3601 ggcttccact ttgcgttcac atcgagcacg aacaccaaat cctgctccgc gaggtacccg
     3661 ccgatcggcg aaaagtgccc cgtccctttc cccatcaaca tcccgcgctg aaaattcgca
     3721 atgtagcggc gcgccggctc attgaatcgc ggcagcagcg cgcgaaaatc gtcgtagctc
     3781 aaaccccgca gcaccgtcac ctgatgcttc gtattgcgtc gcgcaatccc agcgagctca
     3841 tcgagcgaaa gcccgcccca acacatcccg ctccagcact tccccgtccc ctccaaaatc
     3901 gaccgctcat ccgagctcaa ac
//
LOCUS       DATIML010000861         2679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1628575, whole genome shotgun sequence.
ACCESSION   DATIML010000861 DATIML010000000
VERSION     DATIML010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628575"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..799)
                     /locus_tag="VLJ38_14970"
     CDS             complement(<1..799)
                     /locus_tag="VLJ38_14970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSU40879.1"
                     /translation="MARTIHFVSLGCPKNRVDSEVMLGLAEQKGFRHVSDPSDASVIV
                     VNTCGFIDAAKEESINTILELSRQKTEGRCEKLVVTGCLSQRHPDELARELPEVDHLL
                     GSSDMLKLGRVLDGKAERILVGDPASWLVNATDPRRVSTRGRSAFLKLAEGCNRSCSF
                     CVIPSLRGKQRSRSADDIVREAQELADAGIVELNLVSQDTVAWGRDTPGAPSLAALVE
                     RIAEVRGLRWVRLFYLYPERLGDDLVTLIADHPRVVPYVDMPLQHAAD"
     gene            complement(818..1945)
                     /gene="carA"
                     /locus_tag="VLJ38_14975"
     CDS             complement(818..1945)
                     /gene="carA"
                     /locus_tag="VLJ38_14975"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012053752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HSU40880.1"
                     /translation="MNGRPAHLALADGTLFPGRAFGADAAVVGEVVFTTGMTGYQEVL
                     TDPSYCGQIVTMTAPQIGNTGINADDAESVDGRPHVAGFVIRDRSVTVSNWRSEESLD
                     QYLGRNGIAAISDIDTRRLTRYLRDNGSQNGAIGSEPPHILVERARSAPNMEGLDLVA
                     RVTPANAYAFKERRGEWSAPFGDTPRASQRPLSVVAIDYGAKRNILRCLVDAGCNVTV
                     VPAKTSASEILAQNPDGVFLSNGPGDPAAVTYAVSTVRELVGKKPMFGICLGHQLLAL
                     ALGAKTYKLKFGHRGLNQPVQDLATGRVEITTQNHGFCVDVNSLGGKAKSTHLHLNDG
                     SSEGLEVPEARAFSVQYHPEAAAGPHDALYLFDRFVRSMQA"
     gene            complement(1942..>2679)
                     /locus_tag="VLJ38_14980"
     CDS             complement(1942..>2679)
                     /locus_tag="VLJ38_14980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSU40881.1"
                     /translation="HQLTQGADIHEGEISARLGLRGWPRIAEDVIVARDILLAEYVGA
                     RYHVAHVSTRGAARLVREAKGRHIDVTCEVTPHHLLLTDASLLGYDTACKVNPPLREA
                     EDVAALVAALADGTIDAVATDHAPHSPLEKDCELSQARPGMMGLELCFGLLLGLVGTS
                     GLKLERLIDALSTRPARIAGLEAPSLREGALAELTLIDPLARWKPESVRLRSKSRNTP
                     FMSRELMGKVLLTLARGVVVHDAIGGA"
BASE COUNT          411 a          851 c          949 g          468 t
ORIGIN      
        1 cgtcagccgc gtgctgcagc ggcatatcga cgtacggtac gacgcgcggg tggtcggcga
       61 tgagcgtcac cagatcgtcg ccgagtcgct cgggatatag gtaaaagagc cgcacccagc
      121 gcagtccgcg cacctcggcg atgcgctcga cgagcgcggc gagtgacggc gcccccgggg
      181 tgtcgcgacc ccacgccacc gtgtcctgcg agacgagatt gagctccacg atgcctgcgt
      241 cggcgagctc ttgtgcttcg cgcacgatgt cgtcggccga gcgcgagcgc tgcttgccgc
      301 gcaaggacgg gatcacgcaa aacgagcagc tccgattgca gccttcggcg agcttcaaga
      361 acgcactccg gccgcgcgtc gatacccgcc gcggatcggt cgcgttgacg agccagctcg
      421 ctggatcgcc cacgagtatc cgttcggctt tgccgtcgag gacgcgtccg agcttcagca
      481 tgtcgctcga gccgagcagg tgatcgactt cgggcagctc gcgcgcgagc tcgtcgggat
      541 ggcgttggct caggcagccc gtgacgacga gcttctcgca gcgcccctcg gtcttctgcc
      601 gtgaaagctc gaggatcgtg ttgatcgact cttccttcgc cgcgtcgatg aagccgcacg
      661 tgttgacgac gatgacgctc gcgtcgctcg gatcgctcac gtggcggaag cccttttgct
      721 cggcgagacc gagcatgact tcgctgtcca cgcggttctt ggggcagccg aggctgacga
      781 aatggatcgt gcgcgccatg tcggaccgtg ctgcgcgcta ggcctgcatc gagcgcacga
      841 agcgatcgaa gaggtagagt gcgtcgtgcg gtcccgcggc cgcttcgggg tggtactgca
      901 cgctgaaagc gcgcgcctcg ggcacctcga gcccttcgct cgagccgtcg ttcaggtgca
      961 ggtgcgtgct cttggccttg ccgccgagtg aattcacgtc cacgcaaaag ccgtggttct
     1021 gcgtcgtgat ctccacgcgg cccgtcgcga ggtcctgcac cggctgattc agcccgcgat
     1081 gcccgaattt cagcttgtag gtcttggcgc cgagggcgag cgcgagcagc tgatggccga
     1141 ggcagatgcc gaacatcggc tttttgccga cgagctcgcg aacggtcgac acggcgtagg
     1201 tgacggccgc cggatcgccg ggaccgttcg agaggaagac gccgtcggga ttttgcgcga
     1261 ggatctcgct cgccgaggtc ttcgcgggca cgaccgtcac gttgcagccg gcgtcgacca
     1321 gacaacgcaa gatgttgcgc ttggcgccgt agtcgatggc gacgacggag agcggtcttt
     1381 gggacgcgcg cggagtgtca ccgaacggcg cgctccactc gccgcgccgc tccttgaagg
     1441 cgtacgcgtt cgcgggcgtc acgcgcgcca cgagatcgag cccttccatg ttcggggcgg
     1501 agcgcgcacg ttcgacgaga atatgcggcg gttcgctgcc gatagcgccg ttttgcgagc
     1561 cgttgtcgcg caggtaacgc gtgagccgcc gcgtgtcgat gtcggagatg gcggcgatgc
     1621 cgttgcggcc tagatactgg tcgagcgact cctccgagcg ccagttcgag acggtgacgc
     1681 tacgatcgcg gatcacgaag cctgcgacgt gcgggcggcc gtcgacgctc tcggcgtcgt
     1741 cggcgttgat gcccgtgttg ccgatttgcg gcgccgtcat cgtgacgatc tgtccgcagt
     1801 acgagggatc ggtgagcact tcctggtagc cggtcatgcc agtcgtgaac acgacctccc
     1861 cgacgaccgc cgcgtccgcg ccgaaggctc ggccggggaa aagggtgccg tcggcgagtg
     1921 ccagatgtgc ggggcggccg ttcatgcgcc tccaatcgcg tcgtgaacga cgacgccgcg
     1981 cgcgagggtg aggagtactt tgcccatgag ctctcgggac atgaaggggg tgtttctgct
     2041 cttggaacgt aagcgaacgc tctccggttt ccagcgcgcg agcgggtcga tgagcgtgag
     2101 ctcggcgagc gcgccttcac gcaagcttgg cgcctcgagg cccgcaatgc gagccgggcg
     2161 cgtcgagagc gcgtcgatca accgctcgag cttgagcccc gaagtgccga cgagcccgag
     2221 caggaggccg aaacagagct cgagacccat catgccgggc cgcgcctggc tgagctcgca
     2281 gtccttttcg agcgggctgt gcggcgcgtg atccgttgcg acggcgtcga tggtgccgtc
     2341 ggctagggct gcgacgagcg ccgcgacgtc ttctgcctca cgtagcgggg gatttacttt
     2401 gcacgccgtg tcgtagccga gcagcgacgc atcggtgagc aggaggtggt ggggtgtcac
     2461 ttcgcacgtg acgtcgatgt gacggccctt ggcctcacgc acgagccgcg cggctccgcg
     2521 cgtcgagacg tgtgccacgt ggtaacgtgc cccgacgtac tcggcgagca ggatgtcgcg
     2581 ggcgacgatc acgtcttcgg cgatgcgagg ccagccgcgc aggccgagcc gcgctgaaat
     2641 ctcgccctcg tggatgtcgg cgccctgcgt gagctggtg
//
LOCUS       DATIML010000862         3694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4512937, whole genome shotgun sequence.
ACCESSION   DATIML010000862 DATIML010000000
VERSION     DATIML010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3694
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4512937"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1069)
                     /locus_tag="VLJ38_14985"
     CDS             complement(164..1069)
                     /locus_tag="VLJ38_14985"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HSU40882.1"
                     /translation="MPGALSPSDGSAPNAARLVASALRLHWRRSQSELAKFAARADRA
                     RAHDLRVALRRLLSALELAGALDAPAPAKAVRRLERMLSTLSPLRDLEVEKKAVDAMS
                     DDEPELAAIAAELEHERAALARRLSKRLGRFRAAASERALERTAERLEALPSTPDAVK
                     LVVLGRLAHAYAKFDRRRRAVCGADHRALHRARVAFKQYRYTVEAAMPFLPARAARDL
                     MLMKELQDELGAIQDASVLLETLRRLPSLRRRIGAKRRRALLSALERHRRLLVQSMAS
                     VLAAQAGAEPPAFSELFRWTASATA"
     gene            1132..1494
                     /locus_tag="VLJ38_14990"
     CDS             1132..1494
                     /locus_tag="VLJ38_14990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40883.1"
                     /translation="MPRSDPLPLEAVRDLLGIARALYAAQQREFASRQTLDELAAIGK
                     ALVNALRLAKKSGPDTLAHRAAWIQAEDACTRLVHVISLQTPAAAIVEAAVVRVRRIG
                     PRPPSAREERRAAAKIRR"
     gene            1563..3626
                     /locus_tag="VLJ38_14995"
     CDS             1563..3626
                     /locus_tag="VLJ38_14995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40884.1"
                     /translation="MSGKKEEAAQKAVRAALDTWGGRLPARSPPSTRLRRAWTQSGVR
                     TELSTTVFSAEPEEWVAYLTLPFARRYEGDTRVRAHRHRALKLLAFEAENAESAWLAE
                     LLDEGVRAVRHRLENKPHVLAAFEELLFGAMPLQNQTVSVLLSPHVPSDGTRESSHEG
                     ETQVRDQRIVLHARLAHYVHETLHNGAWLPPEQRLGILWPLVSRLTMELAYPPAPLDR
                     FAAKVEVFAKLIYVTLSVLYDGRKSGVLVRSPAGRIYEDQIAESLGIAPARLEEDHAY
                     FRLLAAIGFLTRGEPYASYAAEAKIAAREYLDELYLRLSLSGAMPDVPEAMRPMSFER
                     RGRDVRTPKPAVGAYGIQTSDDLDAWKTVSRPFADLGFTLLRQLGIGEFGRVYEVLNG
                     HNSRFPAHLALKVDRIQGKKKQAILEAEQAMVIGRDLAQAVHLIRLYDGGKLRGERYT
                     YHVLQLVEGDTLDNLVGVTGSEHASVSRPPRARSSEAEGTQEYEQAVSKRASQLWRRE
                     RIALPFTHPLSPAMILDLMSSILLCLMEVHGLDYAINDLKNGNLMMSRRGQLKGIDLD
                     SYAPVHSPRDKVTDFMFLAVSLVLLLSSAGGRAPRGGLPWEELIKDEARLREGLLRTW
                     PFGDTEAMSDGRVSTEELLRALVDLVLRSRQLVYAKHPELFATDVARLVSIKRRLLPE
                     ELVID"
BASE COUNT          609 a         1262 c         1246 g          577 t
ORIGIN      
        1 ggcggggccc ggatgctcgt gacgactgcg ttttacaaaa agcgcgaacc ctcatgccct
       61 cgctgcctgc gcccggacgc ctgcgcgacg ccggactcat acgtctagcg ccgggcgccg
      121 cccagctcta gcccacgcaa aaatcgcgat gaaaaacctg gtcttatgcc gtggcactcg
      181 ccgtccagcg gaaaagttcg ctgaatgccg gcggctccgc gccggcttgg gcagcgagca
      241 cgctcgccat gctctgaacg agcaaacgcc gatggcgctc gagcgcggag agcagcgcgc
      301 gacgacgctt ggctccgata cgacgccgca gggacggtaa acgacgcagc gtctcgagca
      361 gcacgctcgc gtcctggatc gcaccgagct cgtcctgcag ctctttcatc agcatcagat
      421 cacgtgcagc gcgcgcgggc aaaaacggca tcgcggcttc gacggtgtag cgatactgct
      481 tgaaggcgac gcgggcgcga tgcagcgccc ggtggtcggc gccgcagacg gcgcgacggc
      541 ggcgatcgaa tttcgcgtaa gcgtgcgcga gtcgaccgag cacgacgagc ttcacggcgt
      601 ccggcgtgga cggcagcgcc tcgagccgtt ccgccgttcg ttcgagagct cgctcgcttg
      661 cggccgcccg gaagcgaccg agccgtttgc tgaggcgcct ggcgagggcg gcgcgctcgt
      721 gctcgagctc ggctgcgatt gccgcgagct cgggttcgtc gtcgctcatg gcgtcgaccg
      781 ccttcttctc gacctcgaga tcgcggagcg gcgagagcgt ggaaagcatg cgctcgagac
      841 ggcgtactgc cttcgcgggc gcgggcgcgt cgagcgcgcc ggcaagctcc aaagcggaga
      901 gcaggcgtct gagcgccacg cgcagatcgt gtgcacgcgc ccggtccgcg cgtgcggcaa
      961 acttggcgag ctcgctctgc gagcggcgcc agtgtaagcg cagcgccgag gcgacgagcc
     1021 gcgcggcgtt cggcgcggac ccgtccgagg gcgatagagc tccgggcatg cgcgtttgcg
     1081 taccactctt tgcgtcccgc gaaagcgcgt gtagcgcttg acgtcaccgt cttgcctcgt
     1141 tccgacccgc tgccgctcga agccgtccgt gacttgctcg ggatcgcgcg cgctctctac
     1201 gccgcacagc agcgcgagtt cgcgtcgcgg caaacgctcg acgagctcgc ggccatcggc
     1261 aaggcgctcg tgaacgcgct ccgcctcgcg aagaagagcg gaccggacac gctcgcgcat
     1321 cgggcggcct ggattcaagc cgaagacgcg tgcacgcggc tcgtccacgt catctcgctc
     1381 caaacgcccg cggcagcgat cgtcgaggcc gcagtcgtgc gtgtgcgccg aatcggcccg
     1441 cgcccgccga gcgcgcgcga agagcgccgc gcagccgcga agatccggcg ctgagtgcgc
     1501 gggcttcggc gcggtagcag cgcaaattga cctgcatcgg tgctagcgtc gggtccgaaa
     1561 atatgtccgg aaagaaggag gaggcggctc aaaaggccgt gcgcgccgcg ctcgacacgt
     1621 ggggcgggcg cctccccgcc cggtcgccgc cgagcacgcg cctcaggcga gcctggacgc
     1681 agtccggcgt ccgcaccgag ctttcgacca cggtgttcag cgccgaaccc gaggagtggg
     1741 tcgcctacct gacgctgccg ttcgcgcgcc ggtacgaggg ggacacgcgc gtgcgggcgc
     1801 accggcaccg cgcgctcaag ctgctcgcgt tcgaggcgga gaacgccgaa tcggcttggc
     1861 tcgccgagct cctcgacgag ggcgtgcgag ccgtgcggca tcgcctcgag aacaagccgc
     1921 acgtgctcgc ggcgttcgaa gagctcctgt tcggcgcgat gccgctgcaa aatcagacgg
     1981 tcagcgtgct cttgagcccc cacgtgccga gcgacggcac gcgagaatcg tcgcacgagg
     2041 gtgagacgca agtgcgcgac cagcgcatcg tcctgcacgc ccgtctcgcg cactacgtcc
     2101 acgagacgct gcacaacggc gcctggctgc cgcccgaaca gcgtttgggc atcctctggc
     2161 cgctcgtgtc gcggctcacg atggagcttg cgtatcctcc ggcgccgctc gaccgctttg
     2221 ccgcgaaggt cgaggtgttc gcgaagctca tctacgtgac gctgagcgtg ctctacgacg
     2281 gtcgtaaatc gggcgtgctc gtgcgcagcc cggccgggcg catctacgag gatcaaatcg
     2341 ccgaatcgct cggcatcgcg cccgcccggc tggaagagga ccacgcctat tttcggctgc
     2401 tcgcggcgat cggatttctc acgcgcggcg agccgtacgc gagctacgcc gcggaggcga
     2461 aaatcgcagc gcgcgagtac ctcgacgagc tctatttgcg gctgagtctc tcgggcgcca
     2521 tgcccgacgt ccccgaagcc atgcgcccga tgtccttcga acgccgcggg cgcgacgtgc
     2581 gcacgccgaa gcccgccgtg ggcgcctacg gcatccagac cagcgacgat ctcgacgcgt
     2641 ggaaaacggt ttcgcgaccc ttcgccgatc tcggcttcac gctcttgcgc cagctcggca
     2701 tcggcgagtt cggccgcgtc tacgaagtgc tgaacggcca caattcacgc tttcccgcgc
     2761 acctcgcgct caaggtcgat cgcatccaag gcaaaaaaaa gcaagccatc ctcgaggccg
     2821 agcaggcgat ggtgatcggc cgcgatttgg cgcaggccgt gcatttgatc cgcctgtacg
     2881 acggcgggaa gctgcgcggc gagcgttaca cgtatcacgt gctccagctc gtcgagggcg
     2941 acacgctcga caacctcgtg ggcgtcacgg gcagcgagca cgcgagcgtt tcaaggccgc
     3001 cgcgggcgcg gagctccgaa gccgaaggca cgcaggaata cgaacaggcc gtgagcaagc
     3061 gcgccagtca actctggcgg cgagagcgca tcgccttgcc cttcacccac ccgctctcgc
     3121 ccgcaatgat cttggacctc atgagcagca tcctgctctg tttgatggaa gttcatggtc
     3181 tcgactacgc catcaacgat ctgaagaacg gcaacctgat gatgagccgg cgcggtcagc
     3241 tgaagggtat cgatctcgat tcgtacgcgc ccgtgcactc accgcgcgac aaagtgaccg
     3301 atttcatgtt cctcgccgta tcgctcgtgc tcttgctttc gagcgccggt gggcgcgcgc
     3361 cgcggggcgg gctgccctgg gaggagctga tcaaggacga ggcgcggctg cgggagggcc
     3421 tgctccgcac ttggccgttc ggcgatacgg aagcgatgag cgacggccgc gtctcgacgg
     3481 aggagctctt gcgcgccttg gtcgatctcg tgcttcgcag ccgccagctc gtctacgcca
     3541 agcaccctga gctcttcgcg acggacgtag cgcggctcgt ctcgatcaag cgccggctcc
     3601 tgccggaaga gctcgtgatc gactagtctc ggccggaaat cagctgaatt cgccgcgaat
     3661 gtaggcacgc gtctgctctt cgcgcggatc gccg
//
LOCUS       DATIML010000863         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1050631, whole genome shotgun sequence.
ACCESSION   DATIML010000863 DATIML010000000
VERSION     DATIML010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050631"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VLJ38_15000"
     CDS             complement(<1..314)
                     /locus_tag="VLJ38_15000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40885.1"
                     /translation="MLSMPSLRLCASCDPRAAAFVLNLVFALGCAAGRQGPPPAGAAF
                     DTSRPAPHAAQGVADASSELPASEGHVLERTAFVREVLRSNPSIESARSGFRAALART
                     RE"
     gene            complement(402..800)
                     /locus_tag="VLJ38_15005"
     CDS             complement(402..800)
                     /locus_tag="VLJ38_15005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40886.1"
                     /translation="MRSAFARLLMVLAALMLLPGSAWGGILYRCQMSGRVQASCCCDA
                     GKKSAAPESVPGVRASDCCERLIPGDRSKATTPQAASDSVQPAALAAVLSVPLAFGPN
                     RRTPDFAVRQSRAPPGPRRLLFSVHCAYLC"
     gene            complement(902..1981)
                     /locus_tag="VLJ38_15010"
     CDS             complement(902..1981)
                     /locus_tag="VLJ38_15010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSU40887.1"
                     /translation="MRYQLLGNTGLYVSELCLGTMTFGGSSGMWQAIGQLGQSESLAL
                     VSAALDAGVNFIDTADVYAEGESERLLGQALKTLNRPREQLVIATKVRGRVGPGVNQV
                     GLSRAHIFASIDASLRRLGLDHIDLYQIHGFDPVTPLEETLRALDDVVRAGKARYLGF
                     SNLPAWAASHALTFAEENGLARFQSAQVYYSLAGRDIERELAPLCLARKVAILPWSPL
                     AGGLLSGKFDPDKKGPADARRASFDFPPVNAERLPRVLAALRKVADETGASPARVALA
                     WQLTKPFVTSIILGAKRPEQLADNLAAVELELSSEHVKLLEEASALPAEYPGWMVDFQ
                     NSRDPRGASRAATEAEIRAAAARLR"
BASE COUNT          377 a          711 c          717 g          310 t
ORIGIN      
        1 tcctcacgcg tgcgggcgag cgccgcacgg aaaccgctgc gtgcgctctc gatgctcgga
       61 ttgctgcgca gcacctcgcg cacgaaagcc gtgcgttcga ggacgtggcc ctcgctcgct
      121 gggagctcgc tcgacgcgtc cgcgacgccc tgcgcggcgt gcggcgctgg tcgcgacgtg
      181 tcgaaagctg cacccgctgg cggcggccct tgacggccag ccgcgcaacc tagcgcgaaa
      241 accaaattca agacgaacgc ggctgctcgc gggtcgcacg acgcgcacag ccgtaacgac
      301 ggcatggaca acatgtaaaa ctcctggtca ctcggctcgc gaggcgcggc ctcacgagca
      361 atcaggggct agcgagccca actggcgcga acaggagcgc ttcagcagag gtaagcgcag
      421 tgcacactga agagcaggcg tctcggtccc ggcggcgcgc gactctgccg cacggcaaaa
      481 tccggcgtcc gccggttcgg gccaaaggcg agcggaaccg agagcacggc cgcgagcgcc
      541 gcgggttgaa ccgaatcgct cgctgcttgc ggagtcgtcg ccttggagcg gtcacccgga
      601 atgagacgtt cgcaacaatc gctcgcgcgc acgccaggca ccgactccgg tgcggcggac
      661 ttcttccccg cgtcacagca gcaggaggcc tgaacgcgcc cgctcatctg acagcggtag
      721 agaatgccgc cccaagcgct gcccggcagc agcatgagtg ccgcaagcac catgaggaga
      781 cgggcgaacg cggagcgcat ccaacgcact ttgtagcact gcgggattgc cgcggcgata
      841 gcaagagagg gagcgtgctc gcagccgagt cagcgagaac gcgcgcaaat ttttcgcagc
      901 cctagcgcag ccgggccgca gccgcccgga tctccgcctc ggttgctgct cggctcgcac
      961 cgcgcggatc gcgcgagttc tgaaaatcta ccatccagcc gggatactcg gccgggagcg
     1021 cgcttgcttc ctcgagcagc ttgacgtgct cgctcgaaag ctcgagctcg acggctgcaa
     1081 ggttgtcggc gagctgctcc ggccttttgg cgccgagaat gatactcgtg acgaagggtt
     1141 tcgtgagctg ccacgcgagc gccacgcgcg ccggcgaggc gcccgtctcg tccgcgacct
     1201 tacgcagcgc cgcgaggacg cgcggcaagc gctcggcgtt caccggcggg aaatcgaagg
     1261 acgctcgccg cgcgtcggcc ggacccttct tgtcgggatc gaacttcccc gacaaaagtc
     1321 cgcccgcgag cgggctccac ggcaaaatcg cgactttgcg tgcgaggcaa agcggcgcga
     1381 gctcgcgctc gatgtcgcga ccggcgagcg agtagtagac ctgcgcgctc tgaaaacgtg
     1441 caaggccgtt ttcctcggcg aacgtgagcg cgtgcgaggc cgcccaggcg ggcaggttgc
     1501 tgaagccgag ataacgcgcc ttgcccgcac gcacgacgtc gtcgagcgcc cggagcgtct
     1561 cttcgagggg cgtcaccgga tcgaagccgt ggatttggta gaggtcgatg tggtcgagcc
     1621 cgaggcggcg gaggctcgcg tcgatgctcg cgaagatgtg agcccgcgac aggccgactt
     1681 gattgactcc gggcccgacg cgcccccgca ccttcgtcgc gatcacgagc tgttcgcgtg
     1741 gccgattcag cgtcttcaga gcctgaccga ggaggcgctc gctttcgccc tcggcgtaca
     1801 cgtccgccgt gtcgatgaaa ttgacacccg cgtcgagcgc agccgacacg agcgcgagcg
     1861 actcgctttg gccgagctga ccgatggctt gccacatgcc gctactgccc ccgaacgtca
     1921 tggtgccgag gcagagctcg gagacataga gtccggtatt cccgaggagc tgatagcgca
     1981 tgccgcaagc ctaggacatg acgagcggac gtaaagcggc atcgcgagcg cgactttcgg
     2041 cctcggcacg caacacgctg cgcagccgtt ccgcgaaggc ctgcggccga agcacgtagc
     2101 cgttgtggct gcccg
//
LOCUS       DATIML010000864         3730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5096267, whole genome shotgun sequence.
ACCESSION   DATIML010000864 DATIML010000000
VERSION     DATIML010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5096267"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="VLJ38_15015"
     CDS             complement(<1..274)
                     /locus_tag="VLJ38_15015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40888.1"
                     /translation="MVLKQESGSRGRGRFALPLVSALALSLATPAARAQAPKPAVAPK
                     SAVAPTAAAVSNAAVAPKTKVSGDADRTKVSITVYNSGFGLVREVRE"
     gene            complement(265..1683)
                     /locus_tag="VLJ38_15020"
     CDS             complement(265..1683)
                     /locus_tag="VLJ38_15020"
                     /inference="COORDINATES: protein motif:HMM:NF024985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4139 domain-containing protein"
                     /protein_id="HSU40889.1"
                     /translation="MVVLAAGCGGPPPRSAPGPATAKSSTAAGRQKLAITIYNSDFAL
                     VREERTLPLAKGRVELAYADVSAHIQPETVHLRALEAPDALEVLEQNYRYDLLTPDKL
                     LEKYVGKQVKVVRYNEKLGIEETKLADVLSVENGPVLRIDGEITSGVPGRFVFPDVPP
                     NLLAKPTLVWLLASNVEQQRVEVSYLTSNLSWRADYVVVLDAADKKADLTGWVTLANT
                     SGTSYENAELKLVAGDVQRIAPPPPPEPMLEADEAAAPMAARPQFKQESLFEYHLYTL
                     ERPATVLDRETKQVSLLEAHGVDVEKKLEFRGAEGWYRGAYGEIAQNQKVSVYVEFQN
                     SEKNSLGMPLPKGTLRVYKADQSGAQQFVGEDAIDHTPRDEKVEVKLGEAFDVVADRK
                     QMSWTALGDCSSESAWEIEFRNHKDTAETVHDLEPVNGDWEIVQSSQPAVKKDAHTFE
                     FVVPVPARGATKVSYRVRIRWC"
     gene            1881..2972
                     /gene="proB"
                     /locus_tag="VLJ38_15025"
     CDS             1881..2972
                     /gene="proB"
                     /locus_tag="VLJ38_15025"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR01027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HSU40890.1"
                     /translation="MNGREELTKARRLVVKVGSRSLASDTELIPRLAREIASVMAARR
                     SVVLVSSGAIALGTQRLGYPSRPKETAKLQAAAAAGQSVLMRRYDEAFAAVGVTTAQV
                     LLTHADLAERERMNNAREAFAALLDAGAVPVVNENDTVSIEELNFGDNDQLAAMVAPL
                     VGAELLVLLSDVEGVLDENGERISTLGDADVIGKFDAAGPRVGTGGIHSKIEAARKGC
                     RAGAAAVIARAGRPGALLDILDGKDVGTFFPAIGAPLRARQSWIAFTLRPQGTIVLDA
                     GAVAAVRSGKASVLPVGVLGVRGEFAVGDAVRLVGPDGREVGRGLSRLGALDAARAAG
                     KKGALLEAVLGAGRTEIVVVHKDDLVVSE"
     gene            3233..>3730
                     /locus_tag="VLJ38_15030"
     CDS             3233..>3730
                     /locus_tag="VLJ38_15030"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HSU40891.1"
                     /translation="MLLPRAHTKAPQAASRDAEGTEDDLIGLPLALATDEDYVVRVVA
                     GSVTCSGSLIDEDRVLTAHHCLAQRGKSGNMLELDVGPESVRVELGGDPFAWGEVGVR
                     AVIAPTCGYAGGEGDIAILVLERRLIGVATRKAMLDEPPQLGSAITPIGFGRCFFGGS
                     GGRTVR"
BASE COUNT          558 a         1270 c         1249 g          653 t
ORIGIN      
        1 gctcgcgcac ctcgcgcacg agcccgaagc cgctgttgta gaccgtgatg ctgaccttgg
       61 tgcggtccgc gtccccggac actttggtct tcggcgccac cgccgcgttc gaaaccgccg
      121 cggcggtcgg cgcgacggcg ctcttcggcg cgaccgcagg cttcggcgct tgggcgcgcg
      181 ccgcgggcgt cgccaacgac agcgcgagcg cactcacgag cggcagcgcg aaccttccgc
      241 gtcccctgct tcccgactct tgcttcaaca ccatcgaatc ctcactcggt agctcacctt
      301 ggtcgcgccg cgcgccggca cgggcacgac gaactcgaac gtgtgggcgt ctttcttcac
      361 ggcaggctga ctcgactgca cgatttccca atcgccgttg acgggctcga gatcgtgcac
      421 cgtttccgcc gtgtctttgt ggttacgaaa ctcgatttcc cacgcgctct cgctcgagca
      481 atccccgagc gcggtccacg acatctgctt gcgatcggcg acgacgtcga acgcctcgcc
      541 gagcttcact tcgaccttct cgtcgcgcgg cgtgtggtcg atcgcgtcct cgcccacgaa
      601 ctgctgcgcc ccgctctggt cggccttgta aacgcgcagc gtgcccttgg gcagcggcat
      661 gccgagcgag ttcttctcgc tgttctggaa ttcgacgtag accgagacct tttgattctg
      721 cgcgatttcg ccgtaggcgc cgcgatacca gccctcggcg ccgcgaaact cgagcttctt
      781 ttccacgtcc acgccgtgcg cttcgagcag actcacctgc ttcgtctcgc gatcgagcac
      841 ggtcgcaggt cgctcgagcg tgtagaggtg atactcgaac agcgactctt gtttgaattg
      901 gggtcgcgcg gccattggcg cggccgcctc gtcggcctcg agcatgggtt cgggcggcgg
      961 cggcggcgcg atgcgctgca cgtcgcctgc cacgagcttg agctcggcat tttcgtagct
     1021 cgtgccgctc gtgttcgcga gcgtgaccca gcccgtcaaa tcggccttct tgtcggcggc
     1081 gtcgagcacg accacgtagt cggcgcgcca cgacagattg gacgtgaggt aactcacctc
     1141 gacgcgctgc tgctcgacgt tgctcgcgag cagccagacg agcgtcggct tggcgaggag
     1201 gttcggcggc acgtcgggaa acacgaaccg tccgggcacg cccgacgtga tttcgccgtc
     1261 gatgcggagc acgggcccgt tctcgaccga gagcacgtcg gcgagcttcg tctcctcgat
     1321 gcctagcttc tcgttgtacc ggacgacctt gacctgcttg ccgacgtatt tttcgagcag
     1381 cttgtcgggc gtgagcaagt cgtagcggta gttctgctcg agcacctcga gcgcgtccgg
     1441 agcctcgagc gcccgcaagt gcacggtttc gggctggatg tgcgccgaga cgtccgcgta
     1501 ggcgagctcg acgcggccct tggcgagcgg cagggttcgc tcctcgcgga cgagcgcgaa
     1561 gtccgagttg taaatcgtga tggcgagctt ctgccggccc gccgccgtcg agctcttggc
     1621 cgtcgcgggc cccggtgcgg aacgtggggg cgggccaccg caccctgccg caagcaccac
     1681 cactcccaaa agaggaagca gcgagcttgc ctggcgttgt ccgcgccgcc cgtgtttcga
     1741 ctgcattccc agcatcaacg tgccacgccg cctcctcctt acaggtccca ctctgggagg
     1801 gcaaccggac gcgggggcag gacgtaccag acgagccgca ggagctaccg gacgcgtcgg
     1861 gcgtggtatc tgaggcgccc atgaacggcc gagaagagct caccaaagcg cgacgactcg
     1921 tcgtcaaagt gggctcgcgt tcgctcgcga gcgataccga gctcatcccg cgtttggcgc
     1981 gggaaatcgc gagcgtaatg gcggccaggc gctcggtcgt gctcgtttcg agcggcgcca
     2041 tcgcgctcgg tacgcaacgg ctcggctacc cgagccgccc gaaggaaacg gcgaagctcc
     2101 aagcggccgc ggccgccggg cagagcgtcc tcatgcgccg ctacgacgaa gcgtttgccg
     2161 ccgtcggcgt gacgaccgct caggtgctgc tcacccacgc cgacttggct gagcgcgagc
     2221 gcatgaacaa cgcgcgcgaa gcgttcgcgg cgcttctcga cgccggcgcc gtgcccgtcg
     2281 tcaacgagaa cgacaccgtt tccatcgaag agctcaactt cggcgacaat gaccagctcg
     2341 ccgccatggt cgcgcccctg gtcggcgccg agctcctggt gttgctctcc gacgtcgagg
     2401 gcgtgctcga cgaaaacggc gagcgcatca gcaccctcgg cgacgccgac gtcatcggca
     2461 agttcgacgc cgcgggaccg cgcgtcggaa ccggcggaat ccacagcaaa atcgaagcag
     2521 cccgcaaggg ttgccgcgct ggggccgccg ccgtcatcgc gcgcgccgga cgcccgggcg
     2581 cgctgctcga catcctcgac ggcaaggatg tcggcacgtt tttcccggcg atcggcgcgc
     2641 cgctccgtgc acgccagagc tggattgcgt tcacgctgcg tccgcagggc accatcgtgc
     2701 tcgacgccgg agccgtcgcc gcggtgcgct cgggcaaggc gagcgtgctg ccggtcggcg
     2761 tgctcggcgt gcgcggcgag ttcgccgtcg gtgacgcggt gcgcctagtc ggacccgacg
     2821 gacgagaagt aggacgcgga ctctcccgct tgggcgcgct cgacgccgcg cgcgccgcgg
     2881 gtaagaaagg cgcgctactc gaagcggtgc tcggcgcggg tcgcaccgag atcgtcgtcg
     2941 tgcacaaaga cgatctggtc gtgagcgagt aaagacgcta tagtaatggt ccctgtaagc
     3001 acgtgtccgc gcgtgtaggc ttggcccaat gggggctaag aagtttcgtc ctacgccgta
     3061 aggaactccg cgcctccggg gttgtcagtt gcagagcttc atgggcacag tggccgcgga
     3121 cgcatcgtcg cggaagctgg gtgcgtcgtc gtcgccgcgc tcggggggaa gttccgcgcg
     3181 ttggcacaaa ttcagcctaa ttttgtgctg tggctggttc ggcagcgctt gcatgctgct
     3241 tccgcgcgcc cacaccaagg ctccacaagc cgcctcgcgc gacgccgaag gcacggagga
     3301 cgacctcatc ggtctgccgc tcgcgttggc gacggatgaa gactacgtcg ttcgcgtcgt
     3361 cgcgggctcg gtcacctgtt ccgggtcgct catcgacgag gaccgcgtgc tcaccgcgca
     3421 tcactgcctc gcgcagcgcg gcaagagcgg caacatgctc gagctcgacg tgggaccgga
     3481 gtccgtgcgt gtcgagctcg gcggcgaccc cttcgcgtgg ggtgaagtcg gcgtgcgcgc
     3541 cgtcatcgcg cccacgtgcg gctatgccgg tggggagggt gacatcgcga ttctcgtgct
     3601 cgagcggcgc ctcatcggcg ttgccacgcg caaagccatg ctcgacgagc cgccgcagct
     3661 cggctcagcc atcacgccca tcggatttgg gcgttgtttc ttcggcggct ccggcgggcg
     3721 tacggttcgc
//
LOCUS       DATIML010000865         4728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5096461, whole genome shotgun sequence.
ACCESSION   DATIML010000865 DATIML010000000
VERSION     DATIML010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4728
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5096461"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VLJ38_15035"
     CDS             complement(<1..303)
                     /locus_tag="VLJ38_15035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSU40892.1"
                     /translation="MAGNSNNDDDGLIAGINVTPLVDVTLVLLIIFMVTAKIIVSQGM
                     PMDLPKAASGESLQTIFSVELSIDGKAHVDSEAVATDDAILPLAKTAHDRNKDLRAV"
     gene            complement(331..1020)
                     /locus_tag="VLJ38_15040"
     CDS             complement(331..1020)
                     /locus_tag="VLJ38_15040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSU40893.1"
                     /translation="MNLVEWLQHLMTNFGAGWVMWLMIALSVLSVAVMLERGWFYWSL
                     RDDIGRLARELRERLRAEDLDGARKLLEASPSAEAAVVVAGLIEADRGAKAADEAMQG
                     AAALQKMKLERRLAFLGTLGNNAPFMGLFGTVIGVVQAFEALGKQGATAAKDSALTAP
                     TEVMAAIAEALVATAVGLAVAIPAVAMYNYYQRLSRSILANTDALSHVLLAHLVGTPV
                     AGKPDAEAEAE"
     gene            complement(1234..2673)
                     /locus_tag="VLJ38_15045"
     CDS             complement(1234..2673)
                     /locus_tag="VLJ38_15045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IG family 5'-nucleotidase"
                     /protein_id="HSU40894.1"
                     /translation="MSGIGPLPAVPNKIPRADRVFVNHDLRLSAIEWVGFDMDYTLAI
                     YRQDRMDALSVELTVDRLIKRGYPASLKELTYDTRFPIRGLLVDRKYGHVLKMDRYKV
                     VHRGYHGLERLPDDVIQTLYHDRRIRPHTARYHWIDTLFALSEVTSYAAVVTALERQG
                     QPVDYDKLFHDVRASIDEAHADGTVYSVVTSALDEYIERDPELARTLHKLRSAGKRLF
                     LLTNSPNSYTEQVMTYLLGNAMPEYPTWRHYFEVVICSAKKPRFFQEGQLLMEREGDV
                     LKPVKGPLERGRAYEGGNLEEFERLLGVSGANVLYVGDHIYGDILRSKKETSWYTAMI
                     IQELDAEVAAYEGSASDLLRMRSLEEQRERLEDELRFYQGRFKELSRANGGNGADTER
                     IRAKRAVERVRSELRANLAEYAARAERVSTRFHPYFGSLLKEQNEMSSFGLQVELYAD
                     VYMRRVSCLKAYSPQQYFRSPYDLMPHEL"
     gene            complement(2807..3877)
                     /locus_tag="VLJ38_15050"
     CDS             complement(2807..3877)
                     /locus_tag="VLJ38_15050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HSU40895.1"
                     /translation="MARITHLAFRPLDIELAEPFGIATGTQLVAENLLVEVGLSDGTL
                     GIGEAAPFPAVNHETRADAARALEAARDRLLGLEAETWRAASRRATELLGSAPSALCA
                     FETALLDALTRSIGLSLFAFFGGAKPELISDITLTTGSPEHAAEQAARAYQRGFRLLK
                     VKVGGAPLLHDLERLGRAASVAPDAGLVLDANASMRPEEAIRLVRALGALRERVVLFE
                     QPTAATDIAGLRAVRESGIKVAADESARSLADLERIIDEQAADVVNVKIMKSGVVTAL
                     DMATGARAAGLELMVGGMVETRLAMSASACLAGGLGGFSFVDLDTPLFLARDPFQGGF
                     EDSWPRLRLAGIERGHGVSLAT"
     gene            4143..>4728
                     /locus_tag="VLJ38_15055"
     CDS             4143..>4728
                     /locus_tag="VLJ38_15055"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HSU40896.1"
                     /translation="MSRSLTVLVTGDPVPNVERSRGSFSALIRETLGDAWAGEVVVVD
                     ARRGELPSKSETQALVITGSPESVASRLPWILEAESAVAELVRHGVPTLGICFGHQLL
                     GQALGGLVEANPRGREIGTVELELVGDDPLFVGVTAPFRANMSHRDSVTRLPPGALVL
                     GKSRLEPHAVVRFGPRAWGVQFHPEFDGDVMRGYI"
BASE COUNT          743 a         1517 c         1657 g          811 t
ORIGIN      
        1 cacggcccgc aggtccttgt tgcggtcgtg cgcggtcttg gcgagcggca ggatggcatc
       61 gtcggtcgcg accgcctccg aatcgacgtg cgccttgccg tcgatgctga gctcgacgga
      121 aaagatggtt tgcagcgact cgccgctcgc cgccttcggc agatccatcg gcatgccctg
      181 cgagacgatg atcttcgccg tgaccatgaa gatgatgagg agcacgagcg tcacgtcgac
      241 gagcggcgtc acgttgatgc ccgcgatgag gccgtcgtcg tcgttgttgg agttaccagc
      301 catgcgcgtt tcctcgcaaa agggggcgga ctactccgct tccgcttcgg cgtccggctt
      361 accggcgacg ggcgtgccca ccaagtgcgc cagcaaaacg tgactcagcg cgtcggtgtt
      421 cgccaggatc gaacgcgaga gccgctggta atagttgtac atggcgaccg cggggatcgc
      481 gaccgcgagg ccgacggcgg tcgcgacgag cgcctcggcg atggcggcca tcacctccgt
      541 cggcgccgtg agcgcgctgt ccttcgcggc cgtcgcacct tgcttaccga gcgcttcgaa
      601 cgcttggacg acgccgatga ccgtgccgaa cagccccatg aacggagcgt tgttgccgag
      661 cgtgccgagg aacgcgagcc ggcgctcgag cttcatcttc tggagcgctg cggcgccttg
      721 catggcctcg tcagcggcct tcgcgccgcg atcggcctcg atcagccctg cgaccaccac
      781 ggcagcctcc gcgctcggcg atgcctcgag cagcttgcgc gcgccgtcca ggtcttcggc
      841 gcgcagacgc tcgcggagct cacgcgccag ccggccgatg tcgtcgcgga gcgaccaata
      901 aaaccagccg cgctcgagca tgaccgcgac ggataggacg ctcagcgcga tcatgagcca
      961 catgacccac cccgcgccga agttggtcat caaatgttgc agccattcca caaggttcat
     1021 gcgagggtcc ttgaacgagc gcttcgccgt cgtctttctg gggcaccgcc ccccacttgc
     1081 ccagcgggaa gccgccggct cgtagcatga attgccgggg acggggctct ggcgggcggc
     1141 gcgttcgtcg acacgcagct gccacgggtt gttcctgccg cccgtccgaa gcgctccgga
     1201 ccaatctggc ccctgagccg ggtcgagccg aactcagagc tcgtggggca tcagatcata
     1261 cggcgagcgg aaatactgct gtggcgaata cgccttgagg cacgagacgc ggcgcatgta
     1321 gacgtcggca tagagctcga cctggagccc gaagctgctc atctcgttct gctccttgag
     1381 cagcgagccg aagtagggat gaaagcgagt cgagacgcgc tcggcgcgcg cagcgtattc
     1441 ggcgaggttt gcccggagct cggagcggac gcgctcgacc gcgcgtttgg cccggatccg
     1501 ttcggtgtcc gcgccgttgc cgccgttggc gcgcgaaagc tctttgaagc ggccctggta
     1561 gaaacggagc tcgtcctcga gccgctcgcg ttgctcttcg aggctccgca tgcggagcag
     1621 gtcgctggcg gacccttcgt aggcggcgac ttccgcatcg agctcctgga tgatcatcgc
     1681 cgtgtaccag gaggtttctt tcttggagcg caggatgtcg ccgtaaatgt ggtcgcccac
     1741 gtagagcacg ttcgcgccgc tcacgccgag caggcgctcg aattcttcga gattgccgcc
     1801 ttcgtaggcg cggccgcgct cgagcggccc tttcacgggc ttgagcacgt ccccctcacg
     1861 ttccatcaaa agctgcccct cctgaaaaaa gcgcggcttc ttcgccgagc agatcacgac
     1921 ctcgaagtaa tgacgccagg tcgggtactc gggcatcgcg ttgccgagca ggtacgtcat
     1981 cacctgttcg gtgtaggagt tcggggagtt cgtgagcaga aagagccgtt tgcctgccga
     2041 gcgcagcttg tggagcgtgc gagcgagctc ggggtcgcgc tcgatgtact cgtcgagcgc
     2101 gctcgtgacg acgctgtaga cggtgccgtc ggcgtgggcc tcgtcgatcg aggcgcgaac
     2161 gtcgtgaaag agcttgtcgt agtcgaccgg ttgtccctgg cgttcgagcg cggtgacgac
     2221 ggccgcgtag ctcgtgactt cgctcagcgc gaagagcgtg tcgatccaat ggtagcgagc
     2281 cgtgtggggc cggatgcgcc ggtcgtgata gagggtctga atcacgtcgt ccggcagccg
     2341 ctcgaggccg tggtagccgc gatgaacgac cttgtagcgg tccatcttga ggacgtggcc
     2401 gtacttgcgg tcgaccaaca ggccgcggat ggggaagcgc gtatcgtacg tgagctcttt
     2461 gagcgaggcc gggtagccgc gcttgatcag ccgatcgacg gtgagctcga cgctgagcgc
     2521 gtccatgcga tcttggcggt agatcgcgag cgtgtagtcc atgtcgaagc cgacccactc
     2581 gatcgcggag aggcgcaggt cgtgattgac gaacacgcgg tcggcgcgcg ggattttgtt
     2641 cggcacggcc ggcagcggcc cgatgccgct caagggaagc agaagcttct gactttccac
     2701 ggcctggctg gcggacagaa catgagcata gcatccgcgc gctcgttcgc tctgaaaccg
     2761 gcgcggggcg tgcgtgcggc ctttcggcgg atttcgcgga cgggcgctac gtcgcgaggc
     2821 tcacgccgtg tccgcgctcg atgcctgcga gcctcaggcg cggccagctg tcctcgaagc
     2881 cgccctggaa gggatcgcgc gcgagaaaga gcggcgtgtc gaggtcgacg aaggaaaaac
     2941 cgccgagccc gccggccaaa cacgccgacg cgctcatcgc gaggcgcgtc tcgaccatgc
     3001 cgcccaccat gagctcgagc ccggccgcac gggccccggt tgccatgtcg agcgcggtga
     3061 cgaccccgga cttcatgatc ttcacgttga cgacgtcggc cgcctgttcg tcgatgatgc
     3121 gctcgagatc ggcgagcgag cgagcgctct cgtcggcggc cactttgatg cccgactcgc
     3181 gcacggcgcg caggcccgcg atgtccgtcg ccgccgtcgg ctgctcgaac agcaccacgc
     3241 gctcgcgcag cgccccgagc gcacgcacga gccggatcgc ttcttcgggc cgcatgctcg
     3301 cgttggcgtc gagcacgagc ccggcgtcgg gcgcgacgga cgcggcgcgc ccgagccgct
     3361 cgagatcgtg caggagcggc gcgccgccga ccttcacctt gagcaggcga aagccgcgct
     3421 ggtacgcgcg ggcggcctgc tctgcagcgt gttcgggtga gccggtcgtg agggtgatgt
     3481 cgctgatgag ctcgggtttg gcgccgccga agaacgcgaa cagcgagagc ccgatcgaac
     3541 gggtgagcgc gtcgagcagc gccgtttcga aggcgcaaag agcgctcggg gcggagccca
     3601 agagctcggt cgcgcgtcgc gaagccgcgc gccaggtctc ggcttcgagc ccgagcagcc
     3661 ggtcgcgagc ggcttcgagc gcgcgggcgg cgtcggcgcg cgtttcgtgg ttcacggcgg
     3721 ggaacggcgc cgcttcaccg atgcccaagg tgccgtcgga aagccccacc tcgacgagca
     3781 ggttttcggc gacgagctgc gtgcccgtcg cgatgccgaa cggctcggca agctcgatgt
     3841 cgagggggcg gaaagctagg tgcgtgatcc gcgccacttt ggctgagctt agcactccat
     3901 acggttctca tccggaggga gttgaaccgc caagacgcca aggacgccaa gtccggaggt
     3961 tttgatttgg gatcgagctc cgttccgggg ttcatccacc ctccggtctt ggcgcttttg
     4021 gcgtcttggc ggttcaatct cctcccgtgc cgttcgaagc gggtcggtcg cggccccgcg
     4081 acgcgtagac ctcgaggccc gctggcgtgc tcgaaccaac aaaaaaagat tagaatggaa
     4141 aggtgagtcg ttctctcacc gtgctcgtga cgggcgatcc ggtgccgaac gtcgagcgtt
     4201 cgcgcgggtc gttcagcgcg ctcattcggg agacgctcgg cgacgcttgg gccggagagg
     4261 tcgtcgtcgt cgatgctcgg cgcggcgagc tgccgtccaa gagtgagacg caggcgctcg
     4321 tgattacggg ctcacccgaa agcgtcgctt cgcgcctgcc gtggatcctc gaggcggaaa
     4381 gcgcggtggc cgagctcgtg cgccacgggg tgccgacgct cgggatttgt ttcgggcacc
     4441 agctgctcgg ccaagcgctt ggcgggctcg tcgaagcgaa cccgcgcggg cgcgagatcg
     4501 ggaccgtgga gctcgagctc gtgggcgacg atccgttgtt cgtcggggtg acggcgccgt
     4561 tcagagccaa catgagccat cgcgattcgg tgacgcgcct gccgccggga gcgctcgtgc
     4621 tcggcaagag ccggctcgag ccgcacgcgg tcgttcgctt cgggccgcgc gcgtggggcg
     4681 tccagtttca tccggagttc gacggcgacg tgatgcgcgg ctacatcg
//
LOCUS       DATIML010000866         3090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4807957, whole genome shotgun sequence.
ACCESSION   DATIML010000866 DATIML010000000
VERSION     DATIML010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4807957"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1072
                     /locus_tag="VLJ38_15060"
     CDS             <1..1072
                     /locus_tag="VLJ38_15060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40897.1"
                     /translation="DQYVFSVLRKKTPQLERQSLTRGDLVFNGGFQLVYRHQTIANDR
                     TSTVNPNTTTTTNQGNALNTMPGTCTPPSQSTQALNCPIVDAYLPNSYTRRDATAWVP
                     DLWLELKYKKFRFGGEFATIQGSIANISNTTSAPVTTSDPNKSDYKIRAWGIATELEQ
                     KLLEDKLNLGFKFGWASGDPDVDGLTPNFNSQQLQGDQGGGAGLGDRTFSTFRFHPSY
                     RVDMILQRAILTRVQGTYYFRPSADYDFLKDASGQRAGGGIAAIWTRASEFIQAPGHE
                     HDLGIELDGKIYYQSKDGALNDVPGIMGGFFTEIDYGVLFPMAGLGYPDAIKERITTT
                     LGSNAADIKIAQTLRWYLGVLF"
     gene            1133..2149
                     /locus_tag="VLJ38_15065"
     CDS             1133..2149
                     /locus_tag="VLJ38_15065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40898.1"
                     /translation="MLRFRVTAPLLGVIALACSSEGVSPGAAGAGGSGGTTGDAGVAG
                     ANRGGGGGTAGSGRGGAGVDGTTCSAQAGEGGNGDGPASCDMPSYADATVASVMVGKV
                     TITVHDTDGMPVVGTPVTVCGVDVCSHLEHADTEGVAVVNLMSAVKKPALKFGDGLVH
                     AELAILLEDAEAGVVFPDLTLPALPAQGAPISACNTARSNGAELTLAPNATFTLDILP
                     PYDTADTRAFRAAELPPEQFPDGIDHGAGLERIFTLAPLGAVICPPAELRLPNVAGWE
                     PGTRVEFLVQGFGTGLEDGAQPFAPYGEWQSVATGVVDAHGETLRTTSGGLPIISNVG
                     VRRL"
     gene            2146..2793
                     /locus_tag="VLJ38_15070"
     CDS             2146..2793
                     /locus_tag="VLJ38_15070"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HSU40899.1"
                     /translation="MRRWGLFTLTALCVGCGTNRPEIPPELLQNPSDGSCATAGYPKG
                     PYGTDPGDVVANLCFQGWTTPDSSPHTEAALENLSLGAFHDQTGKNYELLLVNTAAIW
                     CAACKNEHKTLGQHYAELAPRGLALVSALFQDDAGGPATVNDLKLWVETFSVKFPMLL
                     DPDYQLGIYGSADQAPLNLLVDARSMRILQRIVGDQSDVIWPLIEDELARREASE"
     gene            2799..>3090
                     /locus_tag="VLJ38_15075"
     CDS             2799..>3090
                     /locus_tag="VLJ38_15075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40900.1"
                     /translation="MRARWAALAATLVWPAGAAAAEDADDGTPVSVELTEATTLMYAW
                     NNRDFSSGDVTTVTNDNWGVWYNRLHAQVTRGAFRFGLRIDNAWFYRSPDPTE"
BASE COUNT          536 a         1054 c         1017 g          483 t
ORIGIN      
        1 cgaccagtac gtcttctccg tcctgcgcaa gaagacgccg cagctcgagc gccagagcct
       61 cacgcgcggc gacctcgttt tcaacggcgg gttccagctc gtctaccgcc accagacgat
      121 cgcgaacgac cgcacctcga cggtcaaccc gaacaccacg acgaccacca accagggcaa
      181 cgcactcaac acgatgccgg gcacgtgcac tccgccgagc caaagcacgc aagcgctcaa
      241 ctgcccgatc gtcgacgcct atctccccaa tagctatacc cgtcgcgacg cgacggcctg
      301 ggtccccgac ctctggctcg agctcaagta caagaagttt cgcttcggcg gcgagttcgc
      361 gaccattcag ggcagcatcg cgaacatctc gaacacgacg tcggctcccg taacgaccag
      421 cgacccgaac aagagtgatt acaagatccg cgcgtggggt attgcgaccg agctcgagca
      481 aaagctcctg gaggacaagc tgaacctcgg cttcaagttc ggctgggcct caggcgatcc
      541 cgacgtggac ggcctcaccc cgaacttcaa cagccagcag ctccaaggcg accaaggcgg
      601 cggcgccggc ctcggcgatc gcacgttttc gaccttccgc ttccacccga gttatcgcgt
      661 ggacatgatc ctgcagcgcg ccatcctcac gcgcgtccag ggcacgtatt acttccgccc
      721 gagcgcggac tacgacttct tgaaagacgc gagcgggcag cgtgccggcg gcggcatcgc
      781 ggccatttgg acccgcgcga gcgagttcat ccaagccccc ggccacgagc atgacctcgg
      841 tatcgagctc gacggcaaaa tctactatca gtcgaaggac ggcgcgctga acgacgtgcc
      901 gggcatcatg ggcggcttct tcaccgagat cgactacggc gtgctcttcc cgatggcggg
      961 tctcggctac ccggacgcga tcaaggaacg gatcacgacg acgctcggct cgaacgcggc
     1021 ggacatcaag attgcgcaga ccctgcgctg gtacctcggc gtattgttct gagacgtccc
     1081 gcggatcttc acggcttggc gtgaggccgg ccgtggggct agctttcgct cgatgctgcg
     1141 ctttcgagtg accgcaccgc tgctcggtgt gatcgcgctc gcgtgcagca gtgaaggggt
     1201 gagcccaggc gctgctggtg cgggcggcag cgggggcacg actggggatg ctggagtcgc
     1261 gggagcgaac cgtggcggcg gcggtggcac ggcgggcagc gggcgcggcg gcgccggagt
     1321 cgacggcacg acttgttcgg cccaggccgg cgagggcggc aacggcgacg gacccgcaag
     1381 ctgtgacatg ccgagctacg ccgacgcgac ggtcgcgagc gtcatggtcg gcaaggtaac
     1441 gatcacggtg cacgacaccg acggcatgcc cgtcgtcggc acgcccgtca cggtctgcgg
     1501 tgtcgacgta tgtagccacc tcgagcacgc ggacacggag ggcgtcgcgg tcgtgaacct
     1561 gatgagcgcg gtgaagaagc cggcgctcaa attcggcgac ggtctcgtgc atgccgagct
     1621 cgcgatcttg ctcgaggacg ccgaggccgg cgtcgtcttc cccgacctga cgctgcccgc
     1681 gctgcctgcg caaggcgcgc cgatttccgc ctgcaacacg gcgcgttcga acggtgcgga
     1741 gctcaccctc gcgccgaacg cgaccttcac cctcgacatc ttgccgccct acgacaccgc
     1801 ggacactcgc gcatttcgcg cggcggagct cccgcccgag caattcccgg acggcatcga
     1861 tcacggcgcg ggactcgagc gcatcttcac gctcgcgccg ctcggcgccg tgatctgtcc
     1921 gcccgccgag cttcgtttgc cgaacgtcgc cggctgggag cccggcacgc gcgtggagtt
     1981 tttggtgcag ggcttcggta ccgggctcga agacggcgct cagccgttcg cgccgtacgg
     2041 cgagtggcag agcgttgcga ccggcgtcgt cgatgcgcac ggcgagacgc ttcggacgac
     2101 gagcggcggc ttgcccatca tttcgaacgt cggggtgcgc cggctgtgag gcggtggggg
     2161 ctcttcacgc tcacggcgct ctgcgtgggc tgcggcacga accgccccga aatcccgccc
     2221 gagctgctgc aaaatccgag cgacgggagc tgcgcgaccg cgggttaccc gaagggcccc
     2281 tacggcaccg atcccggcga cgtcgtcgcg aacctatgct ttcagggctg gacgacgccg
     2341 gactcgtcgc cgcacaccga ggcggcgctc gaaaatctgt cgctcggcgc attccatgac
     2401 caaacgggca agaactacga gctcttgctc gtgaacaccg ccgcaatctg gtgtgcggcc
     2461 tgcaaaaacg agcacaagac gctcgggcaa cactacgccg agctcgcgcc ccgcggcctc
     2521 gcgctcgtga gcgcgctctt tcaggacgat gcgggcggcc ctgcgacggt caacgacctc
     2581 aagctctggg tggaaacgtt cagcgtgaag ttcccgatgc tgctcgatcc cgactatcag
     2641 ctcggcatct acggttcggc ggatcaggcg ccgctcaact tgctggtcga tgcgcgctcg
     2701 atgaggatcc tccagagaat cgtaggcgat cagagcgacg tcatctggcc gctgatcgag
     2761 gacgagctcg ctcggcgcga ggcgtccgag tagcagcgat gcgcgcgcgc tgggcggccc
     2821 tcgccgcgac gctcgtttgg cccgcggggg ccgccgcggc cgaggacgcc gacgacggga
     2881 cgcccgtcag cgtcgagctc accgaggcga cgacgctgat gtacgcctgg aacaaccgtg
     2941 atttctcgtc gggcgacgtg acgacggtca ctaacgacaa ctggggcgtt tggtacaacc
     3001 gcttgcacgc gcaggtgacg cgcggggcgt ttcgtttcgg gctgcgcatc gacaacgcgt
     3061 ggttttatcg ctcgcccgat cccaccgagg
//
LOCUS       DATIML010000867         7414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5672050, whole genome shotgun sequence.
ACCESSION   DATIML010000867 DATIML010000000
VERSION     DATIML010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7414
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5672050"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1259)
                     /locus_tag="VLJ38_15080"
     CDS             complement(<1..1259)
                     /locus_tag="VLJ38_15080"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU40901.1"
                     /translation="MPAPLRPRALIGALLACTATFLLMSTDRHFGFSVPVGATLMALA
                     ALALLDFLGTLRALPASEAAAPSVFGPRAVELAGSVILCGAVIRLVVAGRLPFGHAGA
                     AFGVTGTLLWLGVAAFRLLAGLGIVDGGTPLHRRYGFWLFVVNLVLYVPLLGSYSLSD
                     PWETHYGEVAREMLARDDWISTWWAQENWFWSKPVLDFWLQALAFATFGVRFEPDQML
                     AGVASGYVPHPEWAARLPVFLLMLPAVYLAYRAVAERFGARAGFLGALVLSTAPHWYV
                     IGRQSMTDMPYVAPLTAALACVLLGLGKEPEAEARTFPVRVGKRSFALGAEHLVLGLV
                     AATVLPQVLYLFSRHLTLQTLGPSRGFRWHLDEILYGSPGNCGLPGNDECRLTGPLDP
                     VLQPGVMALIWLAALAIFLWINRKERRS"
     gene            complement(1358..2326)
                     /locus_tag="VLJ38_15085"
     CDS             complement(1358..2326)
                     /locus_tag="VLJ38_15085"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSU40902.1"
                     /translation="MADEETKEETARGFVLGDDEALERTAVVNLNELRKDLSGKRQLK
                     DRHLLVRARGAQLGQVLKLGQQSHRVGRANDCEIWLSDDGVSRRHATILFESGVYTIE
                     DTGSANGTFVGGQKVERATLRDGDLIQFGPQAVFRYSVADEGQEQLLRQLYEASVTDA
                     LTGANNREHFDSQLRMELSFSRRHGTDLSVVMFDVDHFKRVNDTFGHPVGDEVLVEIS
                     KATRRLVRNEDVFARYGGEEFVLILRGIALDGARVVGERLRERIAELSIVTDKGPLKV
                     TVSVGCASFASTPEATAESLVQLADKRLYAAKRGGRNRVVADGSDG"
     gene            2632..4089
                     /locus_tag="VLJ38_15090"
     CDS             2632..4089
                     /locus_tag="VLJ38_15090"
                     /inference="COORDINATES: protein motif:HMM:NF033768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AgmX/PglI C-terminal domain-containing protein"
                     /protein_id="HSU40903.1"
                     /translation="MAHDPLGASYAPVHRYVPPPPPFAAKEAAAATTDLSLYVFPRDG
                     APVDALECEDPALEAVEVTVLWGANVLAVAHLAPPRPFYVGHGDDVDYVLPRELTPCA
                     RASIVELEAGTVRAVAPEGALLAGDEVCFGELRFRVARVTAGKRLPRALGVDSRDFGG
                     VFALSLASVAAFLGALAYYTPALGASLDDELDRDRLDAMRVYLNAQAERERERQHESG
                     DKADAADGGGNPGQAARGPEGKMGRPDRPSVNRRTAIAGTGEHVLPRESALKEAQTFG
                     IVGMLAVMNARSLPSALWGADVANGPDTQDAWGELFGAEPGESGGLGGLRLSGTGHGG
                     GERGDWIGLGGIGTCGTDCGAGSGGHGIGSGIGSTGSGHHPRGPRLTLAGTSVTSGHL
                     PAEVIQRVVRQNYGRFRGCYENGLRANPNLTGRVTARFIIGRDGAVTNAANGGSDLPD
                     SKVVGCVLSQFYGISFPSPENGIVTVSYPIMFTPG"
     gene            4197..4994
                     /locus_tag="VLJ38_15095"
     CDS             4197..4994
                     /locus_tag="VLJ38_15095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40904.1"
                     /translation="MKRALSIWSALLLASLVSVVANAQEGFTRQSFLPPEHGVDLTGM
                     PARPMMVGLDVSTDTNNVPFHFPLHVYIGITDRLALGPIHEIGPFYPFGGLCPNCDHP
                     YDDIGLGILYKIIGKPDFELDFNGDAPLFIGFADHVRMSVRGGVLGRVNFGRVFALVF
                     DPSLQVGLVGRPPEQGNNKDYLWLPAWFYFQVTDKVAPFVGTGFGGQLEGFADSLDIP
                     LEGGCIVSVTRNVDLGGVFQFYNLMGHGGNADGRQIGFLGRFRFGGR"
     gene            complement(5002..6435)
                     /locus_tag="VLJ38_15100"
     CDS             complement(5002..6435)
                     /locus_tag="VLJ38_15100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40905.1"
                     /translation="MASSTSSLSLKDLPARALARLKRTSTASLIFYVLSILLLLLPQV
                     LPNAGDSEFLRLPRIWSGDEPAYLVQITSAARDFDADLSNNYDSALAGGDDAGERRRG
                     ALLDRHLAAGFHGHTAIWHEFYDSDAWKHAEHHVWPPPRIPNTPEPPDFRYSSHPDGL
                     IVLLTPVWLVFGHTSLLEPAVVFCSGLTAIALLFLLRAWMRTLTDDKLSIYVALAATM
                     FGTPLWHYGRSIFNEIYLATFAAAIYFIAFHSKRRWLFGVPIALGLLMKPFFLLLGLP
                     AFFVLRRSFKELFLACVPIGMAGVYVLVTNWLHFGSPLLFPQPSQYFAWSPTAATGLL
                     FDAKHGLLPYAPVLLVALLGWPALLRARPLEATLVAAGAASYSAIFLFVGFWDGGFCF
                     GPRYLLPTIPLWMLGMTQLRSTFVGRKPWAVALAALIGLTSVTINALGALPYSRSWNK
                     HPLSPYLEDTPALFPHDKPKHKHHRKR"
     gene            complement(6456..>7414)
                     /locus_tag="VLJ38_15105"
     CDS             complement(6456..>7414)
                     /locus_tag="VLJ38_15105"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU40906.1"
                     /translation="YGAALYHATMAARGRYAVMGDSDASYDFSDLMPFLKRLREGDDL
                     VMGNRFAGGIKPGAMPWKNRYIGNPILSGVGRLLFRTPIRDFHCGIRGYSLAAFKALD
                     LRTTGMEFASEMVIKATLAKMRVTEVPTTLSPDGRDRPPHLRPWRDGWRHLRFMLLYS
                     PNWLFLVPGLALMLVGAVVTGRLLIGPWHIGGVELDVHTLLYASFAIFVGFQITLFGI
                     FYKVLAIADGLLPESPRLTSLYKYAKLEIGVIAGALLMLAGLVGSLLAVRTWAEAGFG
                     QLLPGQLVRLISVSALGVALGLEVILGSFFLSLLSMRSRRPG"
BASE COUNT         1321 a         2466 c         2481 g         1146 t
ORIGIN      
        1 gagcgccgtt ccttgcgatt gatccacaga aagatcgcga gtgcggccag ccagatcaag
       61 gccatcacgc ccggctgcag tacgggatcg agcggtcccg tgaggcggca ctcgtcgtta
      121 ccgggcagcc cgcagttgcc cggtgagccg tacaagattt cgtcgaggtg ccagcgaaag
      181 ccgcgactag gtcccagggt ttgcagcgtc agatggcgcg aaaacaggta aagcacctgc
      241 ggcaacaccg tcgcggcgac cagcccgagc accaagtgtt ctgcgccgag ggcgaagctc
      301 cgcttgccca cgcgcacggg gaacgtccgc gcctccgctt cgggctcctt gccgaggccg
      361 agcaagacgc acgcgagcgc ggccgtgagc ggcgcaacgt acggcatgtc cgtcatgctc
      421 tgacggccga tcacgtacca atgcggggcg gtcgacagca cgagcgcgcc gaggaacccg
      481 gcacgcgcgc cgaagcgctc cgccacggcg cggtacgcga ggtacacggc gggcagcatc
      541 agcaagaaca ccgggagacg cgcggcccac tcggggtgcg gcacgtaccc gctcgccacg
      601 ccggcgagca tctggtccgg ctcgaagcgc acgccgaacg tcgcgaacgc gagcgcctgc
      661 agccaaaaat ccaagacggg cttcgaccaa aaccaatttt cctgcgccca ccacgtcgaa
      721 atccaatcgt cgcgcgcgag catttcgcgc gctacctcgc catagtgcgt ctcccaagga
      781 tcgctgagcg aatagctccc gagcagcggc acgtagagca cgagattcac gacgaacagc
      841 cagaagccgt agcgccggtg cagcggcgtt cctccgtcga cgatgccaag accggcgagc
      901 agccgaaagg ccgcgacgcc gagccagagc agcgtgcccg tgacgccgaa cgccgcgccg
      961 gcgtgaccga acggcagccg accggcgacg acgagccgga tcaccgcgcc gcacaggatc
     1021 acactgccgg cgagctcgac cgcgcgtggg ccgaagacgc tcggcgccgc cgcctcgctg
     1081 gcgggcaacg cacgcaaggt ccccaaaaaa tcgagcagcg cgagcgccgc gagggccatg
     1141 agcgtcgcgc cgaccggcac ggagaacccg aaatgccgat ccgtactcat caagaggaac
     1201 gtcgccgtgc acgcgagcag ggcgccgatg agcgcgcggg gtcgcagcgg agctggcatc
     1261 gggtccgaag tagctcaacc ggccggcggc gaacagctat cgtccgggcc cgctcacgtg
     1321 ccggaagcac gcgggctgcc ggcggctgct cgagtattca accgtccgag ccgtcggcga
     1381 cgacgcggtt ccgtccgccc cgcttcgcgg cgtagaggcg cttgtcggcg agctgcacga
     1441 gcgactcggc cgtggcttcg ggcgtgctcg cgaaggacgc gcaaccgacg ctcaccgtga
     1501 ccttgagcgg tcccttgtcc gtgacgatcg agagctcggc gatacgctcg cgcagccgtt
     1561 cgccgacgac gcgcgcgccg tcgagcgcga tcccacgcag gatcaggacg aactcttccc
     1621 cgccgtaacg cgcgaacacg tcctcgttgc gcacgagccg gcgcgtggct ttggagatct
     1681 cgaccaacac ttcgtccccc acgggatggc cgaaggtgtc gttcacgcgc ttgaagtgat
     1741 ccacgtcgaa catgacgacc gacagatcgg tgccgtggcg gcgcgaaaac gagagctcca
     1801 tccggagctg gctgtcgaag tgctcgcgat tgttcgcgcc agtgagcgcg tcggtcacgc
     1861 tcgcttcgta cagttgacgc aggagctgct cttgaccctc gtccgccacc gaatagcgaa
     1921 agaccgcctg aggtccgaac tggatcaggt cgccgtcgcg caaggtggcg cgttcgacct
     1981 tttggccgcc gacgaaagtg ccgttggccg agccggtgtc ctcgatggtg tagacgccgc
     2041 tctcgaacag gatggtggcg tggcggcggc tcacgccgtc gtcgctcagc cagatttcgc
     2101 agtcattggc gcgtccgacc cggtgtgact gctgcccgag cttcaggacc tggccgagct
     2161 gcgcgccgcg cgcgcgaacc agcaagtgac ggtccttgag ctgacgcttg ccgctgaggt
     2221 ccttgcgcaa ttcgttgagg ttgacgaccg ccgtgcgttc gagcgcctca tcgtcgccga
     2281 gcacgaagcc cctcgcggtt tcctccttgg tttcctcgtc agccacgccg gggacgacct
     2341 ctcagtagaa gctacaccag ggcccaggtt tcgtggaacg cttatttttt cggctgccgc
     2401 cctttttcgg ttgccgcccc gggcactcga cctgcgcctc tccggggaac ttcgtagggc
     2461 aggcacgtgt ctgtcctgtc gtgctcgttc ggggccacgg cccctgaaac gcccgcgcgt
     2521 agcagagcgc gcgggacaga aaatcgtggg gaaccgctgt gcgcgggatg cggctcactg
     2581 ccgacttttg cgcagcgtgt cctcactcgc cttcaccgag gagtgtcctt catggctcac
     2641 gatccactcg gcgcgtcgta cgcgcccgtc catcgctacg ttcccccgcc gccacccttc
     2701 gccgcaaaag aagcagcagc tgcgaccacc gatctctcct tgtacgtctt tccccgcgac
     2761 ggtgcgcccg tcgatgcgct cgagtgcgag gatccggcgc tcgaagccgt cgaggtgacg
     2821 gtgctctggg gcgcgaatgt cctcgccgtc gcgcacctcg cgccgccgcg gccgttttac
     2881 gtcgggcacg gcgacgatgt cgattacgtg ctgccgcgcg agctcacgcc gtgcgcgcgc
     2941 gcgagcatcg tcgagctcga agcgggtacg gtgcgcgccg ttgcgcccga gggcgcgctg
     3001 ctcgccggtg acgaggtgtg cttcggcgag ctccgatttc gcgtcgcgcg cgtgacggcg
     3061 ggcaaacgtt tgccgcgcgc gctcggcgtg gactcgcgcg atttcggcgg cgtgttcgcc
     3121 ctgtcgctcg cgtccgtcgc ggcatttctc ggcgcgctcg cgtattacac gcccgcgctc
     3181 ggcgcgtcgc tcgacgacga gctcgaccgc gatcgtctcg acgccatgcg cgtctacttg
     3241 aacgcccaag ccgaacgcga acgcgagcgg cagcacgaga gcggcgacaa ggcagacgcc
     3301 gccgacggag gcggcaatcc gggtcaggcg gcgcgcgggc ccgagggcaa gatgggtcgt
     3361 ccggaccgtc cgtcggtgaa tcgccgcacg gccatcgcgg ggacgggcga gcacgtgttg
     3421 ccgcgcgaat ccgcgctcaa agaggcgcaa accttcggta tcgtcggcat gctcgcggtg
     3481 atgaacgcgc gctcgctgcc gtcggcactc tggggcgcgg acgtggcgaa cggacccgac
     3541 acgcaagacg cctggggcga gctcttcggc gccgagcccg gcgagagcgg cggcctcggt
     3601 ggactccgct tgagcggcac cggtcatggc ggcggcgagc gcggcgactg gatcggactc
     3661 ggcggcatcg gcacctgtgg caccgattgc ggcgcgggtt cggggggaca cggcatcggt
     3721 tccggcatcg gcagcacggg ctcgggccat catccgcgtg gcccgcgact cacactcgcc
     3781 ggcacgtcgg tcacgagcgg gcacttgccg gccgaggtca ttcaacgcgt cgtgcgccaa
     3841 aactacggtc gcttccgtgg ttgttacgaa aacggcttgc gcgccaatcc gaacctcacg
     3901 gggcgagtga cggcgcgttt catcatcggg cgtgacggcg cggtcaccaa cgcagccaat
     3961 ggtggttccg acttaccgga ttcgaaagtc gtcggctgcg tcctcagcca attttacggc
     4021 atttcgttcc cgtcaccgga aaacggcatc gtgacggtga gctatccgat catgttcacg
     4081 ccgggctgat tggggcgcga tgccgcgggc ggcggccgaa gcgtgaccat tcggccgctg
     4141 cctcgactcg tgttggctct tccacgcccg ccgacgtcga gactaaagtc gcgcctgtga
     4201 agcgcgctct ttcgatttgg tccgcactct tgctcgcgtc gctcgtgagt gtcgtggcga
     4261 atgcccagga ggggttcacg cgccagagct tcctgccgcc cgagcacggc gtcgacctca
     4321 cgggcatgcc cgcgcgtccc atgatggtcg gcctcgacgt gtccacggac accaacaacg
     4381 tgcccttcca cttcccgctc cacgtgtaca tcggcatcac ggaccgactc gcgctcggcc
     4441 cgattcacga aatcggtcca ttttatccct tcggcggctt gtgccccaac tgcgaccacc
     4501 cctacgacga catcggcctc ggcatcctct acaaaatcat cggcaagccg gacttcgagc
     4561 tcgacttcaa cggcgacgcg ccgctcttca tcggtttcgc cgaccacgtg cgcatgtccg
     4621 tgcgcggcgg cgtgctcgga cgcgtcaact tcggtcgcgt cttcgcgctc gtcttcgatc
     4681 cgtcgctgca ggttggtctc gtcggacgcc cacccgaaca gggcaacaac aaggactacc
     4741 tctggctgcc ggcctggttc tacttccagg tcacggacaa ggtcgcgccc ttcgtcggca
     4801 ccggtttcgg tggccagctc gagggcttcg ccgattcgct cgacatcccc ctcgagggcg
     4861 gctgcatcgt ctccgtcacg cgcaacgtcg acctcggcgg cgtctttcag ttctacaatc
     4921 tcatgggcca cggcggaaac gccgacggcc ggcagatcgg ctttctcggg cgctttcgct
     4981 tcggcggacg atagcgcacg ctcagcgttt gcggtggtgc ttgtgcttcg gcttgtcgtg
     5041 cgggaagagc gccggcgtgt cctctagata cggcgaaagc gggtgcttgt tccaggagcg
     5101 tgagtagggg agcgcgccga gggcgttgat cgtcaccgac gtgagaccga tcagcgcggc
     5161 gagcgcgacg gcccacggct ttctcccgac gaacgtcgaa cggagctgcg tcattccgag
     5221 catccagagc gggatcgtcg gcagcaggta acgcgggccg aagcaaaagc cgccgtccca
     5281 aaacccgacg aacaggaaga tcgccgaata cgaggccgcg cccgcggcga cgagcgtcgc
     5341 ctcgagcggg cgagcgcgca gcagcgccgg ccagcccagg agcgcgacga gcaataccgg
     5401 cgcgtacggc aagagcccgt gcttcgcgtc gaacaagagc ccggtcgctg cggtcgggct
     5461 ccaggcaaaa tattggctcg gttgcgggaa gagcaggggt gagccgaagt gcagccaatt
     5521 agtcacgagc acgtaaacgc ccgccatgcc gatcggcacg caggccaaga acagctcctt
     5581 gaagcttcgg cgcaggacga agaacgccgg caagccgagc aggaggaaga acggcttcat
     5641 caaaagcccg agcgcaatcg ggacgccgaa cagccagcga cgcttggaat ggaaggcgat
     5701 gaagtaaatc gctgccgcga aagtagcgag atagatctcg ttgaaaatcg aacggccgta
     5761 gtgccaaagc ggcgtgccga acatcgtcgc cgcgagcgcg acgtagatcg acagcttgtc
     5821 gtccgtcagc gtgcgcatcc acgcgcgcag cagaaacagg agcgcgatcg cggtgagccc
     5881 cgagcagaag accaccgccg gctcgagcag actcgtgtgg ccgaagacga gccagacggg
     5941 cgtgagcagg acgatcaagc cgtcggggtg gctcgaatag cgaaagtcgg ggggctcggg
     6001 ggtgttgggg atgcgtggtg gcggccagac gtggtgctcc gcgtgcttcc acgcgtcgga
     6061 gtcgtaaaat tcatgccaga tcgcggtgtg gccgtgaaag cccgcggcga gatggcgatc
     6121 gagcagggcg ccgcggcggc gttcgccggc gtcgtcgccg cccgccagcg ccgagtcgta
     6181 gttattcgaa aggtcggcgt cgaaatcgcg cgcggcgctc gtgatctgca cgagataggc
     6241 gggttcgtcg ccggaccaga tgcgaggtag ccgcaagaac tcggagtcgc ccgcattcgg
     6301 cagcacctgc ggcaataaga gcaggagtat cgagagtacg taaaagatca ggctcgcagt
     6361 gctcgtgcgc ttcagccgcg cgagcgcccg cgccggcagg tccttcagcg acagactcga
     6421 agtggagctc gccaacttag attacccgtc gatgcctaac cggggcgccg cgagcgcata
     6481 ctcagcaggc tgagaaagaa actgccgagg atcacctcga ggccgagcgc gacgccgagc
     6541 gcggacactg aaatcaaccg taccaattgc ccgggcagca gctgcccgaa gccagcttcc
     6601 gcccaggtcc tcacggccaa gagcgagccg acgaggcccg cgagcatcaa cagcgctccg
     6661 gcgatcacgc cgatctcgag ctttgcatac ttgtaaaggc tggtcaggcg cgggctctcg
     6721 ggcagaagcc cgtccgcgat ggcgagcacc ttgtagaaga tgccgaagag ggtgatctga
     6781 aaaccgacga agatcgcaaa cgacgcgtag agaagcgtgt gcacgtcgag ctcgacgccg
     6841 ccgatgtgcc agggtccgat caagagccgc cccgtcacca cggctccgac gagcatcaac
     6901 gcgagcccgg gtacgaggaa cagccagttg gggctgtaaa gcagcatgaa gcgcaaatgg
     6961 cgccagccgt cgcgccaggg gcggaggtgc ggtgggcgat cgcggccgtc ggggctcagc
     7021 gtcgtcggca cctcggtgac gcgcatcttg gcgagcgtcg ccttgatcac catctccgac
     7081 gcgaactcca tgcccgtcgt gcgcaaatcg agtgctttga acgcggcgag cgaatagccg
     7141 cgaatgccgc agtgaaagtc gcggatcggt gtgcgaaaga gcaggcgtcc aaccccgctg
     7201 aggatcggat taccgatgta gcgattcttc cagggcatcg cacccggctt gatgccgccc
     7261 gcgaagcgat tgcccatgac gaggtcgtcg ccctcgcgca ggcgcttcaa gaacggcatc
     7321 aggtccgaaa aatcgtagct tgcgtccgag tcgcccatca cggcgtagcg gccgcgagcg
     7381 gccatcgtcg cgtggtagag cgcggcgcca tagc
//
LOCUS       DATIML010000868         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5097485, whole genome shotgun sequence.
ACCESSION   DATIML010000868 DATIML010000000
VERSION     DATIML010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5097485"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VLJ38_15110"
     CDS             <1..263
                     /locus_tag="VLJ38_15110"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HSU40907.1"
                     /translation="VVEEWKWRGVPVWYQDGMICTGETYKDVVKLTFAQGAQLADPAR
                     LFNSSLEGNTRRAIDFRQGEKVNEKALKTLVRDAVKLNQSKS"
     gene            complement(265..1332)
                     /locus_tag="VLJ38_15115"
     CDS             complement(265..1332)
                     /locus_tag="VLJ38_15115"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSU40908.1"
                     /translation="MHTRTPLEVRELARGLALPWALAFLPDGRLLVTEKHEGKLVLLT
                     LGGEEPREIKGVPRVDGRDQGGLLDVALGPDYPTSHLVYVSYYEPREGGNGLAVARAR
                     FVEGAQPALESLQVVFRMQPTLDSSKHAGGRLVFSPHGTLFVTLGERSILKGRVQARD
                     LASDLGKIVRILPDGGIPKDNPFVERAGARPEIWTLGHRNVLGAALDSKQRLWVAEMG
                     PRGGDELNLIERGKDYGWPTIGYGEEYSGASIHATTQAPGLEQPVYYWDPVISPGALA
                     IYSGALMPEWKGDFLIAGLSSEAVVRLTLKNDRVVGEERLFTDRHERMRDVVEGPDGA
                     VYLLTDESSGKLLRVAPAGGP"
BASE COUNT          345 a          652 c          682 g          325 t
ORIGIN      
        1 cggtcgtcga ggaatggaaa tggcgaggcg ttccggtttg gtaccaggac ggcatgatct
       61 gcaccggtga gacgtacaag gatgtcgtca agctgacctt cgcccagggc gcgcagctag
      121 ctgaccccgc ccgtctcttc aactcgagcc tcgagggcaa cacacggcgc gccatcgact
      181 ttcggcaagg cgagaaggtc aacgagaagg ccttgaagac gctcgtgcgc gacgcggtga
      241 agctgaatca atcgaagtcg tgaatcatgg cccacccgcg ggcgcgaccc gcaggagctt
      301 gccgctcgat tcgtcggtca ggagataaac ggcgccgtcc ggaccttcga cgacatcgcg
      361 catgcgttcg tgacgatccg tgaataggcg ctcttccccg acgacgcggt cgttcttcag
      421 cgtgaggcgc acgacggctt cgctcgacag cccggcaatg agaaagtcgc ctttccactc
      481 cggcatcaag gcgcccgaat aaatcgcgag cgcgcccggc gagatcaccg ggtcccaata
      541 atagacgggc tgctcgagcc cgggcgcctg cgtcgtcgca tgaatgcttg cgcccgaata
      601 ctcctcgccg tagccgatcg tcggccagcc gtagtcttta ccgcgctcga tcaggttgag
      661 ctcgtcgccg ccgcgggggc ccatttcggc cacccaaagc cgctgcttcg agtcgagagc
      721 cgcgccgagg acgttgcggt gacctagggt ccaaatctcg ggtcgcgcgc cggctcgttc
      781 gacgaacgga ttgtctttgg ggatgccgcc gtccggcaag atgcggacga tcttgccgag
      841 gtcgctcgcg agatcgcgcg cctgcacacg tcccttcaga atcgagcgtt cgcccagcgt
      901 gacgaacaag gttccgtggg gcgaaaacac cagacgtccg cccgcatgct tgctcgagtc
      961 gagcgtcggt tgcatgcgaa agacgacctg caacgactcg agcgccggct gcgcgccctc
     1021 gacgaaccgg gcgcgcgcga cggcgaggcc gttcccgccc tcacgcggct cgtagtagct
     1081 cacgtaaact aggtgactcg tcgggtaatc gggaccgagc gcgacgtcga gtaacccgcc
     1141 ttggtcgcga ccgtccactc gcggcacacc cttgatttcg cgcggttcct cgcccccgag
     1201 cgtcaggagc acgagcttgc cttcgtgctt ctccgtcacg agcagccgcc cgtcgggcaa
     1261 gaacgccagc gcccaaggca aagcgagccc gcgcgcaagc tcgcgcacct cgagcggcgt
     1321 tcgagtgtgc atggccggcg cccgcgtctg acccgcaaat gctggcttga actcgggcac
     1381 gttcggcggc cccgtttcga ccggcccttc ggaaacgccc gagggtgccg gcgctacgcg
     1441 aggtcgcgtg cgttcgcctt gtccactcgc tgggacgacg ctggccgtct gctgcccgct
     1501 cgccgtgggc gtccgggcac acgcgaagca cccgagcaac aatgcagacg ccacgtgggt
     1561 cagtgcggtg cgcatgggtg atgctcgaag catgaaccat tccgcaattg gcgggatgct
     1621 gggcaaccgc cgcgccgatt tactcagggg cgaactattt aggcgagagc gtgaaacaat
     1681 tcgtcttttg tcgcgggccg tagcgacgta gaggggaagg agcgggcatc tttgtcggga
     1741 gcggtgagcg atgatgaagc agcgatatcg agcggcgctc ggggtcctct ccgccctgct
     1801 cggcgcctgc ggggcatctg agtacaagcg gccgccgggg tctggtggct cggccggttc
     1861 ggcgatgggt ggagcagcga cggacgggac tgcgacgggc ggctcgtcgg cctcgccaag
     1921 cggcggaaat gcgggctccg gcggcagcac gaccggacgc ggcggcgccg gtccggccgg
     1981 gtcaggcggc gatggaccag ggaa
//
LOCUS       DATIML010000869         4902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3651110, whole genome shotgun sequence.
ACCESSION   DATIML010000869 DATIML010000000
VERSION     DATIML010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4902
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3651110"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..371
                     /locus_tag="VLJ38_15120"
     CDS             <1..371
                     /locus_tag="VLJ38_15120"
                     /inference="COORDINATES: protein motif:HMM:NF012961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 9 protein"
                     /protein_id="HSU40909.1"
                     /translation="IARTALVLVTASRIDADNSRRYLDAVSTQLGHLFGRNYYGRSFV
                     TGVGAKPPLHPHHRPSIADGIEPPWPGLLVGGPSKSDQAPATVWQDDSADYTSNEVAI
                     NWNAPLIYALAAFQPAGEVP"
     gene            complement(556..1071)
                     /locus_tag="VLJ38_15125"
     CDS             complement(556..1071)
                     /locus_tag="VLJ38_15125"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSU40910.1"
                     /translation="MTNPTATFSTSLGDFTAEIYADQMPVTAQNFIKLAKSGFYDGLH
                     FHRVIDGFMIQFGCPHSKDPSSPRAGTGNSPDGTIQDEHPANAKLSNEPGTLAMANTG
                     RPNSGSCQFFINTVHNAYLDWFTPGPSKHPVFGKITQGLDVVKKIEKTATDERDRPVK
                     PVQMVKVTINE"
     gene            1242..2174
                     /gene="argF"
                     /locus_tag="VLJ38_15130"
     CDS             1242..2174
                     /gene="argF"
                     /locus_tag="VLJ38_15130"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF001986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HSU40911.1"
                     /translation="MHLLKTSDLSAADLAYLLRRSAKFKAKPFARRSVLAGETVCCYF
                     AKPSTRTRISFETAVAHLGGTPAFLSAKDLQLGRGETFEDTARVISRYSRALVIRTFE
                     DADVERLASAATIPVINALTDGHHPCQSLADLLTIQQHRGRVAGQKIAYLGDGNNVAV
                     SLVQAAALAGAHVAVASPDGYSLPDAIVQSARAVADKHAGSVLVTRDPEEAVRDADVV
                     YTDVWLSMGHSEHERAERHRVLMPYQVNAAAMRKAKRDALFLHCLPAHRGEEVTADVV
                     DGPQSVIFDQAENRLWTSMAVLYALVEEKLQGVS"
     gene            complement(2193..3041)
                     /locus_tag="VLJ38_15135"
     CDS             complement(2193..3041)
                     /locus_tag="VLJ38_15135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40912.1"
                     /translation="MSSAGSRSGRLVLLFALACACEGPPPEQVRLELPDLVTSPDPVH
                     LTVHARRGGASSEVNQGVNFAVAPADVALVGKDMNLSCRKSGDATVTASVQGVKATAP
                     VKCRLVERLETSSLPLFDLSQPPVTLQVHTLGKSGTPLDDVPVTLSTDSPRVVSVSGT
                     TLTPLAVGETHVMVSAGNRSTKIPVRVVRSLKPEALPLEGGHRIYFGLPEGKYEVAIE
                     LPIEKTLSVEWRGAPYCAYKGSGKSHVSTCVLEHKGGAVLDNPGYLLTGNTAVSAAGI
                     SIREVP"
     gene            complement(3104..4297)
                     /locus_tag="VLJ38_15140"
     CDS             complement(3104..4297)
                     /locus_tag="VLJ38_15140"
                     /inference="COORDINATES: protein motif:HMM:NF015376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HSU40913.1"
                     /translation="MGPSRALGADLVISAALALALAACTSTHSVTAVTPAAAPSAVSA
                     EASHAESPEDPDNADTPAAEASDDSEEPDDEPEESEHEPVAGEHRPHPLDGWSEEQIA
                     RAVRTDMSSLGSMSVGIPNAGLLVNGRQAQKCEFYSPIAPATAWGTEETLAYLDAALR
                     KVHATVPDTPALVLGDISAQTGGPISPHLSHQAGRDVDISYFYVGEQRWYRRGNAENL
                     DLKRNWAFIRALVTETDVDLIFMDNSIQALIRDYALSIGEDHAWVEGLFGRGGERAII
                     RYARGHATHVHVRFYNPIAQETARRSYAALVARGVVPPVQNYLQHLVKKNETLGKIAK
                     KYGVSVEAIKRVNRLKKSLIHENRPILIPVAHPRPAPPAARLAFPPRRVPPSDPDGRA
                     ASREH"
     gene            complement(4300..4560)
                     /locus_tag="VLJ38_15145"
     CDS             complement(4300..4560)
                     /locus_tag="VLJ38_15145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40914.1"
                     /translation="MLDPTSTRGPRASTLLVLSLAIAAAFVSGAAWAGDTRLDDANAS
                     AAKAIALLKAVPSPVAELDAHRKKAIDLLTRAQGEILKAKGE"
     gene            4620..>4902
                     /locus_tag="VLJ38_15150"
     CDS             4620..>4902
                     /locus_tag="VLJ38_15150"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSU40915.1"
                     /translation="MQSLEFSSEIPGPDPLVVFEAWQRSAVEQRLPAPDAFALATATP
                     DGRPSVRTVLYKGMRDGALRLVTNYESRKGVELLRNPHAALVFFWPALER"
BASE COUNT          769 a         1597 c         1653 g          883 t
ORIGIN      
        1 ccatcgcgcg cacggcgctc gtactcgtga cggcctcgcg catcgacgcc gacaactcgc
       61 ggcgttacct cgatgccgtc agcacgcagc tcggccactt gttcggtcgc aattactacg
      121 gccgttcgtt cgtgaccggc gttggcgcca agccgccgct ccacccccac caccggccct
      181 cgatcgccga tggcatcgag ccgccttggc cggggctcct cgtcggcggc ccatcgaaga
      241 gcgatcaggc gcccgcgacg gtatggcaag acgattccgc cgactacacc tcgaacgagg
      301 tcgccatcaa ctggaacgcg ccgctgattt acgcgctggc tgccttccaa cccgcagggg
      361 aggttccttg aggagccgtt tcatcgctga ctcggtcaag ttttctgagc cactgtcgac
      421 cgaatctcga ccgcccaggt ggggcgacta gagcacgtgt catgtcgggc tggggcctgc
      481 gccccagcta gtactacccg ttagaaactc gtgttcgcga gcgctgggct ttagagcgga
      541 ctcgcgcgag tcccgtcatt cgttgatggt gactttgacc atctgtacgg gtttcacggg
      601 gcgatcgcgc tcgtccgtcg cggtcttctc gatcttcttc acgacgtcga gcccctgcgt
      661 gatcttgccg aacaccgggt gcttggaagg gccgggcgtg aaccaatcca ggtaggcgtt
      721 gtggaccgtg ttgatgaaga actggcagct gccgctgttc gggcgccccg tgtttgccat
      781 cgcgagcgtg ccgggctcgt tcgagagctt ggcgttcgcg gggtgctcgt cttgaatggt
      841 gccgtcagga ctgttgccgg tgccggcgcg ggggctcgac ggatccttgc tgtgcggaca
      901 cccgaactgg atcatgaacc cgtcgatgac gcggtggaaa tggaggccgt cgtaaaagcc
      961 gctcttggcg agcttgatga agttctgcgc cgtgaccggc atctggtcgg cgtagatttc
     1021 ggccgtgaaa tcaccgagtg acgtggaaaa ggtggcggta gggttcgtca tcgcggccgc
     1081 cacattaacg ccctccgcac ggacccgcaa tccgttagac ccggagcgcg gacgcgccga
     1141 tcgaacaaaa gcgacacggg cacacaatgc tgcgcctaaa agggctattt ttgcctccac
     1201 gcctcgggaa atgagctagc gtcacgcgct tcccgctgat gatgcacctg ctcaaaacct
     1261 ccgatttgtc cgcggccgat ctcgcttatc tcttgcgacg ctcggcaaag ttcaaggcga
     1321 agcccttcgc acggcgcagc gtgctcgccg gcgagacggt gtgctgctac ttcgccaagc
     1381 cctcgacccg gacgcgcatt tcgttcgaga cggccgttgc gcacctcggc ggcacgccgg
     1441 ccttcctgag cgccaaggac ctgcagctcg gtcggggcga aacgttcgag gatacggcgc
     1501 gggtcatcag ccgctactcg cgcgcgctcg tcatccgcac gttcgaggac gccgacgtcg
     1561 agcggctcgc ctcggccgcc accattcccg tcatcaacgc gctgacggac ggccatcatc
     1621 cgtgccagag cctcgcggat ctgctgacga ttcaacagca ccgcggcagg gtggccggac
     1681 agaagatcgc ctacctcggg gacggcaaca acgtcgccgt gagtctcgtg caggcggcgg
     1741 cgctcgccgg agcgcacgtg gccgtcgcga gccccgacgg ttactcgctg ccggatgcca
     1801 tcgtgcaatc cgcgcgcgcc gtggccgaca agcacgcagg cagcgtgctc gtcacgcgcg
     1861 atccggagga agccgtgagg gacgcggacg tcgtctacac ggacgtctgg ctctcgatgg
     1921 gccattcgga gcacgagcgc gccgagcgac accgcgtgct catgccgtat caggtgaacg
     1981 ctgccgcgat gcgcaaagcc aagcgcgacg cgctctttct gcactgcttg ccggctcacc
     2041 gcggcgaaga agtgacggcc gacgtcgtgg acggcccgca gtcggtcatc ttcgatcagg
     2101 cggaaaaccg gctgtggacg agcatggcgg tgctctacgc gctcgtcgaa gaaaagctgc
     2161 agggtgtgag ctgagttgct cgggggcgcg tattagggga cctcacgaat gctgatcccc
     2221 gccgcgctca ccgccgtatt gcccgtcaaa agatagcccg gattgtcgag cacggcgccg
     2281 cccttgtgct cgaggacgca ggtcgaaacg tggctcttcc ccgagccttt gtaggcgcag
     2341 taaggcgcgc cgcgccactc gacgctcagc gttttttcaa tcggcagctc gatcgcgact
     2401 tcgtatttgc cctcggggag accgaagtag atgcggtggc cgccctcgag cggcagggct
     2461 tcgggtttca ggctccgcac gacgcgcacg ggaattttcg tgctgcgatt gccggcgctc
     2521 accatgacgt gcgtttcgcc cacggcgagc ggcgtgagcg tagtgcccga gacgctcacg
     2581 actcgcgggc tatcggtgct gagcgtcacc ggcacgtcat cgagcggcgt gccggatttg
     2641 ccaagcgtgt gtacctgcaa cgtgacgggc ggctggctca gatcgaagag cggcaagctc
     2701 gacgtttcga gacgctcgac gagccggcac ttgaccgggg ccgtggcttt cacgccctga
     2761 acgctcgccg tgaccgtggc gtcaccggac ttccggcacg acaggttcat gtccttgccg
     2821 acgagggcta cgtccgcggg cgcgacggcg aagttgacgc cctggttgac ctcgctcgac
     2881 gcgcctccgc gccgtgcgtg aacggtcagg tgaaccgggt cgggcgacgt cactaggtcc
     2941 ggcagttcga gccgcacctg ctcgggcggc ggcccttcac aagcgcatgc gagcgcgaag
     3001 agcagaacga gacgacccga acgtgagccc gcagaggaca tacgaccctt gcgtgtagca
     3061 gaccgcgcac cgcgggagaa cgcgagaatc cggctccgct ggctcagtgt tcgcggcttg
     3121 cggcgcgacc gtcggggtcg ctcggcggga cgcggcgagg cgggaaggcg aggcgcgcgg
     3181 ccggtggtgc gggacgcggg tgcgcgacgg ggatcaggat cggccggttt tcgtggatca
     3241 ggctcttctt caggcgattg acgcgtttga tcgcctcgac gctcacgccg tatttcttgg
     3301 cgatcttgcc gagcgtctcg ttctttttga ccaggtgttg gaggtagttt tggaccgggg
     3361 gcacgacgcc gcgcgcgacg agcgcggcgt aactgcgccg cgcggtttct tgcgcgatcg
     3421 gattgtagaa gcgcacgtga acgtgcgtcg cgtgcccgcg cgcatagcga atgatggcgc
     3481 gctctccgcc ccggccgaag agtccctcga cccacgcgtg gtcctcgccg atcgagagcg
     3541 cgtaatcacg aatgagcgcc tggatcgagt tatccatgaa gatgagatcg acgtccgtct
     3601 cggtcacgag ggcacgaatg aacgcccagt tgcgcttcag atcgagattt tccgcgttgc
     3661 cgcggcgata ccagcgctgt tcgccgacgt aaaagtacga gatgtccacg tcgcggcccg
     3721 cttggtggct caggtgcggc gagatcgggc cccccgtttg cgcgctgatg tcgccgagca
     3781 cgagcgccgg ggtgtcgggc accgtcgcgt gcactttgcg gagggcggcg tcgaggtagg
     3841 cgagggtttc ctcggtgccc caggcggtag ctggcgcgat tggcgaataa aactcgcact
     3901 tctgcgcttg ccggccgttc acgagtaggc cggcgttggg aatgccgacg gacatcgagc
     3961 cgagcgagct catgtccgtg cggacggcgc gcgcgatctg ctcttcgctc cagccgtcga
     4021 gcgggtgcgg tcggtgctcg cctgcaaccg gctcgtgctc ggactcctcg ggttcgtcgt
     4081 ccggttcctc gctgtcgtcg ctcgcctcgg cggcgggtgt gtcggcgttg tccgggtcct
     4141 ccggcgattc cgcatgcgac gcctcggccg acacggcgct gggcgccgcc gcgggagtca
     4201 ccgctgtgac ggagtgcgtg ctcgtgcagg cagccaacgc cagcgctagg gcggcgctga
     4261 tgacgaggtc cgcgccgagc gcgcggctcg gacccaagct cactcgcctt tggccttgag
     4321 gatctcgccc tgcgcgcgcg tcaatagatc aatcgccttc ttgcgatgag cgtcgagctc
     4381 cgcgaccggt gagggcaccg ccttgagcag ggcgatggcc ttggccgcgc tcgcgttggc
     4441 gtcgtcgagc cgtgtgtcgc cggcccacgc ggcgcccgag acgaacgcgg cggcgattgc
     4501 caacgacagc acgaggagcg tgcttgcgcg cgggcctcgc gtgctggtgg ggtcaagcat
     4561 ggtagccatc ctacacggtc cgacgatgct acgctcgcgc agccccggtt cttcccgcca
     4621 tgcagtcgct cgaattttcc agtgaaattc ccggtccgga tccgctcgtc gtgttcgaag
     4681 catggcagcg gagcgccgtc gaacagcgac tgcccgcgcc cgacgcattt gcgctcgcga
     4741 ccgcgacacc cgacggccgc ccctcggtac ggaccgtcct ttacaagggc atgcgggacg
     4801 gagccttacg gctcgtgacc aactacgaga gtcgcaaagg cgtcgagctc ttgcgaaatc
     4861 cccacgctgc cctcgtgttc ttttggcctg cgctcgagcg gc
//
LOCUS       DATIML010000870         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2783739, whole genome shotgun sequence.
ACCESSION   DATIML010000870 DATIML010000000
VERSION     DATIML010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2783739"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            271..981
                     /locus_tag="VLJ38_15155"
     CDS             271..981
                     /locus_tag="VLJ38_15155"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU40916.1"
                     /translation="MDHAVDHAVTNSFAAHVRLARSVGARTRNSAVTCNGLRCSATSC
                     VSLALVLPGISMSSLSDAELAALVASREGRAEAQLFLRFAPRIELYGLKHLRDRAGAD
                     DLVQQVMLRVLEAVREGRLEDPTKLTSFVFGTCRNVTWDLRRARRREQRLEREATSLE
                     ATVGPPTLGEQEIARLFASMNTLSERESTIVRMTFFEDRTTDDIAARLALTASNVRVI
                     RHRALAKLAKRLHAGELS"
     gene            978..1517
                     /locus_tag="VLJ38_15160"
     CDS             978..1517
                     /locus_tag="VLJ38_15160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40917.1"
                     /translation="MSCPSLENVVAWALDELPQAAAELFEEHYFECELCFRRAQHVHR
                     LVAELDASLPPLLTRERREKLGAAEPDMPAIKVRPGERATLHLGGRSQFGLWVMQAPL
                     ENATRVDFEARDSHGELLFAHQDVPFDADRNEVVLACQVHYRALPVAGTFCVRLAATD
                     RAGARRVSEYVLDHEFESV"
     gene            1578..2312
                     /locus_tag="VLJ38_15165"
     CDS             1578..2312
                     /locus_tag="VLJ38_15165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSU40918.1"
                     /translation="MTVTNHEAGTRIDEIASRIYRISTPVPPNPGLPGGFSFNQFLLA
                     ADEPLLFHTGPRKLFPLVRQAVEHVLPPETLRYIAFSHWEADESGALAPWLATAPDAV
                     ALSGNIGAMVSASDASDRKPRGLADGEQLELGGQRVVWFDAPHVPHGWDCGFLGELTT
                     KTLLCGDLFTQPGAEHPPLTERELIGPSEAMRKQMDYFAHAPSTRQHLERLAAFEPRT
                     LACMHGSSFAGDGRAQLLGLAAALEA"
BASE COUNT          397 a          848 c          794 g          402 t
ORIGIN      
        1 aattgcggcc actggccaag aggccggatc cgctgctgga ggtggcgctg ctgagacaag
       61 ttgtcggaaa ggttggagat gtgaacgccg cgcgtgctcg gctcgtggtt gcgcaggttc
      121 tgcgtgacga gagagtcagc aagaaccatg cgccaactac aagcacccac atcggccggc
      181 caggcgcttt cgagcgaccg actgcgaaac gtccggtgtg agtcaggagc ctgcggggag
      241 ccggcccgtg gatcggcgga ctctgccgcc gtggatcacg ccgtggacca cgccgtgacg
      301 aactcgttcg cggcgcacgt caggcttgcc cgctccgtcg gagcgcgaac cagaaattcc
      361 gccgtcacgt gtaacggcct gcgctgctcg gccacttcct gcgtgtctct cgcgctcgtg
      421 ctacccggca tttcgatgtc gagtctgtcc gacgccgagc tcgcggcgct ggtcgcttcg
      481 cgagagggac gcgccgaagc acagctcttc ctgcgcttcg cgccgcgtat cgagctctac
      541 ggcttgaaac acctgcgcga ccgcgccgga gcggacgatc tcgtccaaca agtgatgctg
      601 cgcgtactcg aagccgtccg cgagggcaga ctcgaagatc cgaccaagct cacgtcgttc
      661 gttttcggaa cctgccggaa cgtcacctgg gatctgcgcc gcgcccgccg gcgcgaacag
      721 cgcttggaac gcgaagccac gagtctcgag gcgacggttg gcccgccgac gctcggcgag
      781 caggaaatcg cgcgcttgtt cgcgagcatg aacacgctgt ccgaacgcga atccaccatc
      841 gtgcgcatga ctttttttga ggatcgcacg accgacgaca tcgccgcgcg cctggcgctc
      901 acggccagca acgtgcgggt gatccgtcac cgcgcgctcg ccaagctcgc gaaacgcctg
      961 cacgctggag agctctcgtg agctgcccta gcctagaaaa tgtcgtcgct tgggcgctcg
     1021 acgagctacc gcaagcagcg gcggagctct tcgaggagca ctatttcgag tgcgagctct
     1081 gcttccgccg cgcccagcac gtgcaccggc tcgtggccga gctcgacgct tcgttgccgc
     1141 ccctgctcac gcgcgaacgg cgagagaagc tcggcgcggc cgagcccgac atgcccgcga
     1201 tcaaggtgcg gccgggcgag cgcgcgacgt tgcacctcgg cggacgcagc caattcgggc
     1261 tctgggtcat gcaggcgccg ctcgaaaacg cgacgcgcgt cgacttcgag gcgcgcgact
     1321 cccacggcga gctcttgttc gcgcaccaag acgtgccgtt cgacgcggac cgcaacgagg
     1381 tcgtgctcgc ttgtcaggtt cactatcgcg cgctgcctgt cgcggggacc ttttgcgtgc
     1441 gcctcgctgc gaccgatcgc gcgggtgctc gccgagtctc cgaatacgtc ctggatcacg
     1501 aattcgaatc ggtttaggtc cgttcgctgt aacgcggcgg gtgcgacctc cactaccgag
     1561 caaaacggag gagtcgtatg accgtcacga atcacgaagc cggaacccgc atcgacgaga
     1621 tcgcctcgcg catctaccgc atcagcacgc ccgtcccgcc gaatcctggc ctgcccgggg
     1681 gcttttcgtt caatcagttc ctgctcgccg ccgacgagcc actgctgttc cacacggggc
     1741 cgcgcaagct cttcccgctc gtacgacaag ccgtcgagca cgtgctaccg cccgagacgc
     1801 tgcgctacat cgcgttctcg cattgggagg ccgacgaatc cggtgcgctc gccccgtggc
     1861 tcgccacggc gcccgacgcc gtggcgctct cgggcaacat cggggcgatg gtttcggcct
     1921 cggacgcgag tgaccgaaaa ccgcgcggcc tcgcggacgg cgagcaactc gagctcggcg
     1981 gtcagcgcgt cgtctggttc gacgcgccgc acgtcccgca cggctgggac tgcggcttcc
     2041 tcggcgagct cacgacgaag acgctgctgt gcggcgacct cttcacccag ccgggcgccg
     2101 aacacccgcc gctcacggaa cgggagctca tcggcccgag cgaggcgatg cgcaagcaga
     2161 tggactactt cgcgcacgcg ccgagcacgc gacagcacct cgagcgcttg gcggccttcg
     2221 aaccgcgcac gctcgcttgc atgcacggca gctcgttcgc gggtgacggt cgcgcgcagc
     2281 tgctcggcct agccgcggcg ctcgaggcct gagcgcgccg ccgaagcggc aatacgtggc
     2341 gccgagtcgg ctgctccggc tcggcgtcag tccttttcga cgtgcttgag cttgatcacc
     2401 ggcttcaacg tgaatgcgca ggttcccgct tgctcgagcg a
//
LOCUS       DATIML010000871         1637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1345079, whole genome shotgun sequence.
ACCESSION   DATIML010000871 DATIML010000000
VERSION     DATIML010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1345079"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VLJ38_15170"
     CDS             <1..201
                     /locus_tag="VLJ38_15170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40919.1"
                     /translation="TDAASARGGTARLLADLAARGALLGAAAPNGVETKPERAVPSPH
                     GLRGARETTTMHGSDKEPHERS"
     gene            188..>1637
                     /locus_tag="VLJ38_15175"
     CDS             188..>1637
                     /locus_tag="VLJ38_15175"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional serine/threonine-protein
                     kinase/formylglycine-generating enzyme family protein"
                     /protein_id="HSU40920.1"
                     /translation="MSARDPLRIVGTLVADKYRIEKLVGEGGFALVYRAVHTIWNKPV
                     AIKFFNGLSSAPVDQRAQFQQAFIQEGALLTELSSHTAAIVQARDVGTYTSPDGQWMP
                     YMVLEWLEGFALDQLLEREKRAGLAPWTLAEVLGLLGQVAAALDVAHGKGIAHRDIKP
                     PNLFVIGTGERNPAAAVKVLDFGVAKMMSDNTELKAALAKTGMAVTSFTPQYGAPEQF
                     SRSYGATGPWTDVFALALVAVEMLTGKPPLDGDDLVQLGFAAGNPTRRPTPRTLGLVV
                     PDAVESVFARALAVRPEERYARAAEFWAAFERALGTTSSAARTLRPSVRPHTAPTELA
                     PATVPVRTGPSTTDGGAATTDPRPVETKSKLGLVVAGVAALGLAAAAALALRNKPAPE
                     KPTAAASIASTPAPVLASAAPAASVAAPVPSCPERSAKIPAGQYFQGSDAKDAADNEK
                     PSHNVSLNAFCMDLYETTAKEYKACSDVGKCRR"
BASE COUNT          277 a          605 c          536 g          219 t
ORIGIN      
        1 acggacgcgg cgtccgcgcg gggcggcacg gcgcgcctac tcgccgacct cgccgctcgc
       61 ggggcgctct tgggcgcggc ggccccgaac ggcgtcgaaa cgaagccgga gcgcgccgtt
      121 ccgtcgccgc acggcttgcg aggcgcacgg gaaaccacga cgatgcacgg ctcggacaag
      181 gaacctcatg agcgctcgtg atcccctccg tatcgtcggc acgctcgtcg ccgacaagta
      241 ccgcatcgag aagctcgtcg gtgaaggcgg cttcgcgctc gtctatcggg ccgttcacac
      301 gatttggaac aaaccggtcg cgatcaagtt cttcaacggc ctctcgtcgg cgcccgtcga
      361 ccagcgcgct cagttccaac aagccttcat tcaagaaggc gcgctcctca cggagctctc
      421 gagtcacacg gccgcgatcg tgcaggcgcg cgacgtcggc acgtacacct cacccgacgg
      481 ccaatggatg ccgtacatgg tgctcgaatg gctcgagggc ttcgcgctcg accagctact
      541 cgagcgcgaa aaacgcgcgg gcctcgcgcc gtggacgctc gcggaagtgc tgggcttgct
      601 cggccaagtc gctgccgccc tcgacgtggc acacggcaag ggcatcgcgc accgcgacat
      661 taaaccgccg aatctgttcg tgatcggcac gggtgagcgc aatccggcgg ccgccgtcaa
      721 agtcttggat ttcggcgtcg ccaagatgat gagcgacaac accgagctca aagcggcgct
      781 cgccaagacg ggcatggccg tcacttcctt cacgccacag tacggcgcgc ccgagcaatt
      841 cagccgctcc tacggcgcga ccgggccgtg gacggacgtg ttcgcgctcg cgctcgtcgc
      901 ggtcgagatg ctcaccggca agcctcccct cgacggcgac gatctcgtgc agctcgggtt
      961 cgccgcgggt aatcccacgc gccgtccgac gccgcgcacg ctcggactcg tcgtaccgga
     1021 cgccgtcgaa agcgtgttcg cgcgagcgct cgcggtgcgg cccgaggaac gctacgcgcg
     1081 ggccgcggag ttctgggcgg cgttcgaacg cgcgctcggc acgacgagca gcgcggcgcg
     1141 cacgctgagg ccgtcggttc gcccgcacac ggcgccgacc gagcttgccc ccgcgacggt
     1201 cccggtgcgc acggggccga gcacgacgga cgggggcgcg gccacgaccg acccccgccc
     1261 cgtcgaaacc aagtcgaagc tcggcctggt cgtcgctggc gtcgccgcgc tcggcctggc
     1321 cgcggcggcc gcgctcgcgc tgcggaacaa gcccgcgccc gaaaaaccta cggcagccgc
     1381 gtccatcgcg agcacacccg ctcccgtcct cgcgagcgca gcgccggcag cgagcgtcgc
     1441 cgctcccgtc ccgagctgtc ccgagcgcag cgccaaaatc ccggccggcc aatacttcca
     1501 aggctccgac gccaaggacg cggccgacaa cgaaaagccg tcgcacaacg tcagcttgaa
     1561 cgccttctgc atggatctct acgagaccac ggcgaaggaa tacaaagcat gctcggacgt
     1621 gggcaagtgc cgccgcc
//
LOCUS       DATIML010000872         1859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3075224, whole genome shotgun sequence.
ACCESSION   DATIML010000872 DATIML010000000
VERSION     DATIML010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3075224"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..1444)
                     /locus_tag="VLJ38_15180"
     CDS             complement(128..1444)
                     /locus_tag="VLJ38_15180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40921.1"
                     /translation="MRACAWLFLTVISAAAPARATPAAHGEPPCTSEPSALGGLACEL
                     ARAVRAQAGNAVVVGLAPTLSPSTPLKPAVAVALAVKVALALGRAASAWPLAEDRAHL
                     AHFASPRPLVVVTPKLDGDALVASLELFAPATPPVTSGNARLDASVHLVAKRGFDAEV
                     RRFLPAIALVARELVRVGPAESDVVALACGDLDGTGVPVVASVGRTFVTFGAYRAGKY
                     TLISRREQRELAPVAPTPLREALGTAWITPASTLDFGLSDRAHAVRLRGTQAEALAAR
                     LPWPGGGCVNLDAPLVSPRAVRCSKDEPQISEPALAEPLDALAGAVIVSRAGDARLVR
                     AGRLASGAVVVTDGAHEIRLDHGGAQLALADLDGDGAPELVTSLDTLDPHSDAVVVYS
                     WLGSSLSERLRVAVPAGVRALAVCPAPADRMPSIVVATSEGLWVIR"
     gene            1578..>1859
                     /locus_tag="VLJ38_15185"
     CDS             1578..>1859
                     /locus_tag="VLJ38_15185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40922.1"
                     /translation="MRLLSGIVGVGAVVVSLLLPRAAQAQCVDEALKQQLVGERAYRG
                     VVPRLIKKALRHEISAFGGWYAGDISDGAPTFGGAYTFHFTEDLGLEASY"
BASE COUNT          281 a          644 c          683 g          251 t
ORIGIN      
        1 agcgtgccac cgagtggcgt gcgtccgagc gcccgcgcgc gctcgagcaa gagcgcgttc
       61 acggtcgtcg cagccaggcc gctaacgagc gcccgccgtc ccaaacgagg aggagcgtgc
      121 cggtgcgtca tcggatgacc cagagtcctt cgctcgtcgc gaccacgatg ctcggcatgc
      181 gatcggcggg agcggggcac acggcgagcg cacgcacccc ggcgggcacg gcaacgcgca
      241 gccgctcgct caggctcgaa ccgagccagg agtaaacgac gacggcgtcg gagtgcggat
      301 ccagcgtgtc caggctcgtg acgagctcgg gcgcgccgtc gccgtcgaga tcggcgagcg
      361 cgagctgggc gccgccatgg tcgagccgga tctcgtgagc gccgtccgtc acgacgacgg
      421 cgccggaggc gagccgtccg gcgcgcacga gccgcgcgtc gcccgcgcgt gaaacgatca
      481 cggctccggc gagcgcgtcg agcggctcgg cgagtgccgg ctcgcttatc tggggctcgt
      541 ccttgctgca gcgcacggcg cgcggcgaga cgagcggcgc gtcgaggttc acgcagccgc
      601 cgccgggcca cggcaagcgg gccgccagcg cctctgcctg ggtaccgcgc aagcgtacgg
      661 cgtgagcgcg atcgctcaga ccgaaatcga gcgtgctagc cggtgtgatc caggccgtgc
      721 cgagcgcttc acgcagcggc gtcggagcga ccggcgcgag ctcgcgctgc tcgcgccgcg
      781 aaatcagcgt gtacttgccc gctcgataag ctccgaacgt cacgaaggtg cgtccgacgc
      841 tcgcgacgac gggcacgccc gtaccgtcga gatcgccgca cgcgagcgcg accacgtcgc
      901 tctcggccgg tccaacgcgc acgagctcgc gcgcgacgag cgcgattgcg ggcaaaaatc
      961 ggcgcacctc ggcgtcgaag ccgcgcttgg cgacgaggtg cacgcttgca tccaggcgcg
     1021 cgttgccgct ggtgacgggc ggcgtagccg gtgcgaagag ctcgagcgac gcgacgagcg
     1081 cgtctccgtc gagcttcggc gtgacgacga cgagtggtcg cggactcgcg aaatgcgcga
     1141 ggtgcgcccg gtcctcggcg agtggccacg cgctggccgc ccgcccgagc gcgagcgcca
     1201 ccttgacggc gagtgcgacc gcgacggccg gcttgagtgg cgtcgaaggt gacaaggtag
     1261 gagcgagacc gaccaccacc gcattgcccg cttgcgcgcg cacggcacgc gcgagctcgc
     1321 atgcaagccc gccgagcgcg ctcggttcgc tcgtgcacgg gggctcgccg tgagctgccg
     1381 gcgtcgcgcg cgccggcgcg gccgccgaaa tcacggtgag aaacagccac gcgcacgcac
     1441 gcatcgcgct cgagattact cacggatgcc cgagcgcgca gggcatgcac ccgttttgcc
     1501 gccgttttac gatcgaccgc acggccggcg cacttcccgc gagcgaggtg tgatattccc
     1561 gggtgtcgtt gagcggcatg cgtttactta gcgggatcgt cggtgtgggt gcggtcgtcg
     1621 tgtctctgct gctgccgcga gcggcgcagg cgcagtgcgt cgacgaagca ctcaagcaac
     1681 agctcgtcgg cgagcgcgcg tatcgcggtg tcgtgccgcg cctgatcaag aaggcgctgc
     1741 gtcacgagat ttcggccttc ggcggctggt acgcggggga catctccgac ggcgcaccga
     1801 cgttcggcgg cgcgtacacc tttcacttca ccgaggatct cgggctcgag gcgtcgtac
//
LOCUS       DATIML010000873         3417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_765868, whole genome shotgun sequence.
ACCESSION   DATIML010000873 DATIML010000000
VERSION     DATIML010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3417
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_765868"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VLJ38_15190"
     CDS             complement(<1..443)
                     /locus_tag="VLJ38_15190"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSU40923.1"
                     /translation="MAKVTPARGDLPRLLYGTAWKEERTERLTRLALELGFTGIDTAN
                     QRKHYYEAGVGAAVRSALDAGITTRERLFLQTKFTSVDGQDHRLPYDGRAPVGEQVAQ
                     SFASSLEHLGTDYLDSYVLHGPSRSRGLGPADWDAWRAMENLVRQG"
     gene            complement(487..1101)
                     /locus_tag="VLJ38_15195"
     CDS             complement(487..1101)
                     /locus_tag="VLJ38_15195"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU40924.1"
                     /translation="MLALLFAAAVVADSPVVRRGLTDILGASAELRVVGSAPLDEAQR
                     FDAESIDVIVEDVPDDTTAEMALSRVPAGVPVLALVGRPERTRELVQSGAQGALRRDA
                     SGESLMAASVAVAAGLYAFDRDTVAPLLTRSVPIPDAGTLSAREREVLELVASGLSNR
                     AIGEALGVTEHTVKFHVRSLLDKLGADTRADAVARAARRGLLTL"
     gene            1262..2143
                     /locus_tag="VLJ38_15200"
     CDS             1262..2143
                     /locus_tag="VLJ38_15200"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSU40925.1"
                     /translation="MSQLSAVSQALGDAVARVNRSVVAVHGGRCETASGVAFSREHVV
                     TAAHALERETELEVTLGDERVPATLVGADPGSDLAVLRVERELSPLPHADLAALRPGE
                     LALAVSRGARGLKARLGIISRVGPGWRVGPGLEAERYVESDIAPAPGLAASALVDANG
                     ALIGLNATGVVRGVLVALPSGVVARAVDAIVRHGHVRRAKMGVVVERVELPAAVAARR
                     GKRRGLIVLGVAPGGPAELAGVLLGDVILTLGGQAVGRADELASVLDEGKIGVELAVE
                     ILRAGAEQTLSVKPEAR"
     gene            2140..3051
                     /locus_tag="VLJ38_15205"
     CDS             2140..3051
                     /locus_tag="VLJ38_15205"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSU40926.1"
                     /translation="MTPLVELSESIERLVSDTSPSVVAVEHARGQGSGLVIASDGYVV
                     TNSHVVRGAQELAVAIGPGERVSAEVVGDDPASDLAVVRVGATGLPSLALLEERRLRV
                     GQLVLAIGNPLRFDRSVSLGVVSALDRTLPAERGRALEGLVQTDAAINPGSSGGPLLD
                     ARGVAVGITTAVIPMARGLGFAIPAHTVSWVVAMLLKAGHIERPRIGIGARGVELPPV
                     RARELGQARAVEVLEVVTGEAADRGGLRRGDLLLRANGEAVGSVDDLVRKLVLSGGAG
                     LTLELVRGRERERRTVEVTPGAERHAA"
BASE COUNT          462 a         1160 c         1289 g          506 t
ORIGIN      
        1 ccttgccgca cgaggttttc catcgcgcgc catgcgtccc aatccgccgg cccgagcccg
       61 cggctgcgtg acggaccgtg gagcacgtag ctgtcgaggt agtcggtgcc gaggtgttcg
      121 agcgagctcg cgaacgattg cgcgacctgt tcgccgacgg gggcgcggcc gtcgtacggg
      181 agccggtgat cctggccgtc gacggaggtg aacttggttt gtaagaagag ccgctcgcgc
      241 gtggtgatgc ccgcgtccag cgcggagcgc acggccgcac ccacgccggc ttcatagtag
      301 tgcttgcgct gattcgcggt gtcgatgccg gtgaagccga gctcgagcgc gaggcgcgtc
      361 agccgctcgg tgcgctcttc cttccaagcc gtgccgtaga gcaagcgcgg caggtccccc
      421 cgagccggcg tgactttcgc catcagtggg acgatagccg aaatccgccg gcgcggcgtg
      481 cgtccgttac agtgtcaaaa ggccgcgccg ggccgcgcgc gccacggcat cggcgcgcgt
      541 gtcggcgccg agcttgtcga gcagcgagcg gacgtggaat ttcaccgtgt gctcggtcac
      601 gccgagcgct tcgccaatgg cgcggttcga gagcccgctc gccacgagct cgagcacctc
      661 gcgctcgcgc gcgctgagcg tccccgcgtc ggggatgggc acgctgcgtg tgaggagcgg
      721 cgcgacggtg tcgcggtcga acgcgtagag ccccgccgca acggcgaccg acgccgccat
      781 gaggctttcg cccgaggcgt cgcgccggag cgccccctgc gcgccgcttt gcacgagctc
      841 acgtgtccgt tcgggccggc ccactagcgc gagcaccggc acgcccgcgg gcacgcgcga
      901 gagcgccatt tcggcggtcg tgtcgtcggg tacgtcttcg acgatcacgt cgatgctctc
      961 ggcgtcgaag cgctgcgcct cgtcgagcgg ggcgctgccg acgacgcgga gctccgcgga
     1021 cgcgccgagg atgtccgtca ggccgcggcg gacgaccggc gaatcagcta ccacggccgc
     1081 cgcgaacaag agggccaaca tgtcccttga acctaagcac gcgcgccgcg ctgtaaagcc
     1141 ctgctcgaac gggtaggccc gcgcgcccgt tcggcgagtt acgccgcgag ggcgcggtcc
     1201 ttagtttctt tgtacgcggc ccattcggca gtcgaacgag cccgcgccca gacgaggaat
     1261 catgagtcag ctttcagcag tttcccaggc gctcggcgac gcggtcgcgc gagtgaaccg
     1321 tagcgtcgtc gccgttcacg gcggccgctg cgaaacggca agcggcgtcg ctttcagccg
     1381 tgaacacgtg gtcacggcgg cccacgcgct cgagcgcgaa accgagctcg aggtgacgct
     1441 cggcgacgaa cgcgtgccgg cgacgctcgt cggtgccgac ccgggcagcg atttggccgt
     1501 cttgcgcgtc gagcgcgagc tttcacccct gccgcacgcc gacctcgctg cgctccggcc
     1561 gggtgagctt gctctggccg tgtcgcgcgg agcccgcggg ctcaaggcac ggctcgggat
     1621 catcagccga gtcggtccgg gctggcgcgt gggcccgggt ctcgaggccg aacgctacgt
     1681 cgagagcgat atcgcacccg cgccggggct cgcggcgagc gcgctcgtcg acgcgaacgg
     1741 cgcgctcatc gggctcaacg ccacgggcgt cgtgcgcggc gtgctcgtgg cgctgccgag
     1801 cggtgtcgtt gcgcgcgccg ttgacgccat cgtgcgccac ggtcacgtgc ggcgcgcgaa
     1861 aatgggcgtc gtggtggagc gcgtcgagct acccgcggcc gtggcggcgc ggcgcggcaa
     1921 gcggcgtggg ctcatcgtgc tcggcgtcgc acccggtgga cccgcggagc tcgcgggcgt
     1981 gctgctcggc gacgtgatcc tcacgctcgg cgggcaggcg gtcggccgcg ccgacgagct
     2041 cgcgagcgtg ctcgacgagg gtaaaatcgg cgtcgagctc gcggtcgaaa tcctgcgtgc
     2101 cggggccgaa cagacgctca gcgtgaaacc ggaggcgcga tgacgccgct cgtcgagctc
     2161 tccgagtcca tcgagcgact cgtgagtgac acgtcgccga gcgtggtcgc ggtcgagcat
     2221 gcccgcggcc aggggagcgg gctcgtgatc gcctcggacg gttacgtcgt gaccaattcg
     2281 cacgtggtgc gcggcgcgca agagctcgcc gtcgccattg ggccgggtga acgcgtgtcg
     2341 gccgaagtgg tcggcgacga tcccgcgagc gacttggccg tcgtgcgcgt cggcgcgacc
     2401 gggctgccga gcctcgcctt gctcgaggag cggcgcctgc gcgtagggca gctcgtgctc
     2461 gcgattggca atccgttgcg cttcgatcgg tcggtgagtc tcggggtcgt gagcgcattg
     2521 gatcgcacgc tgccggcgga acgcggccgc gcgctcgaag ggctcgtgca gacggacgct
     2581 gccatcaatc cgggcagctc cggcggaccg ctgctcgacg ctcgcggcgt cgccgtgggc
     2641 atcacgacgg cggtcatccc gatggcgcgc gggctcggtt ttgcgattcc ggctcacacc
     2701 gtgagctggg tcgtcgcgat gctgctcaaa gcagggcata tcgagcggcc gcgcatcggc
     2761 atcggcgcgc gcggcgtgga gctgccgccc gtgcgggcgc gcgagctcgg tcaagcgcgt
     2821 gctgtcgagg tgctcgaggt cgtgacgggc gaagcggccg accgcggcgg cctgcggcgt
     2881 ggcgatttgc tgttgcgcgc gaacggcgaa gcagtcggca gcgtcgatga tctcgtgcgc
     2941 aaactcgtgc tctccggcgg agccggactc acgctcgagc tcgtgcgcgg gcgcgaacgc
     3001 gaacgccgca cggtcgaagt cacgccagga gccgagcggc acgcggcgta aaactaggct
     3061 tgcggccact gcacgcagct cacgtcgtgc gaacgacgct gagctccggc ggcgttcgct
     3121 ttccgtgttc gggcaatgag ctgcccccgc gcggtccggc gctgcacgtc ctgcgtgctc
     3181 ggccgtcggc ctgcgcgcgc aggcgcccgc ctagcgcccg ctgcgcgggc gcgggggcgc
     3241 gacgacatcg ggcggcattg ggcggcggcg gcatcggagc ggcgtcgggg gcggagcgcg
     3301 aaagacgtgc ccggggctgc gacgcgcgga attgcaccga tgccgtcgcc gtgaacagac
     3361 gcgcgacgag ctaagcggaa ctcggccggc gacggcgata tcagtcgatg ttacggc
//
LOCUS       DATIML010000874         2808 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3075406, whole genome shotgun sequence.
ACCESSION   DATIML010000874 DATIML010000000
VERSION     DATIML010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2808
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3075406"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..>2808)
                     /locus_tag="VLJ38_15210"
     CDS             complement(157..>2808)
                     /locus_tag="VLJ38_15210"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU40927.1"
                     /translation="RWEFAAEARRNWARFQPSIADPSAWRFQMPSRGSEPGPVTRPSG
                     ARAPNPDLEPAPDRPPGLLSIRPSPLVGREDIRRSLRDLCNELVSGEGPPHRLALLVG
                     PAGAGKSRIAEWLCETMHEEGKMVPLRARYRAIRSPLDGMLGAALAYYNFERVDRHTI
                     ERSLLDRWKVRRDDKNGRAWVAGAAEWMRPMGSEQAIGPSGIRFTLDTLETRRMVIRY
                     TLRKIANKRPLLFWLDDLHNTGPATMDGLLRILEDEPDQRIMMLATARSEEVALGTSA
                     ADRLRQLREATNGTVIEVPPLTPERTVELIRSSIPLDDAAVEEAARRSRGNPLFALQQ
                     LHAWALSGHMEFAGNVYRVPPDVLSVRPQTTAELWDSRLASVPEQHRVAAYAAATLGG
                     DVRRNVLHALLSSLGQPADSAMLSLSNAEVLIPRGPGRYSWPHELLQEHLLMRLQTRP
                     DREKIYRAAAAALTLHPLAGQRRIVRQRMVNLIEANDSDTAALLLFDFLQQSWNGARE
                     PLATLADLELLKGKLRGRTLALKNRWQAEALRHIGRMAEANTYAELARARFEELGDNE
                     NIAHCQRLLGQLSSEQGGSAEGLDLVRRAFITFDSLGNVLGKALCQSAAGEIEYQLGD
                     YEQARDTIVQAERAFAELDQPLGRGQCLLLLSWIEHSEGATERSRRFAQEARGEFERA
                     GYRLGTAQADVSLAHIEHRLMNYHGAETGALEALVVFETLRTPRGQAACDRLLAMVGL
                     DTDDLEMAELYATRAHKTYAKTNDPWGVMETKLLFCQIALFRHDTARARELLEECSRI
                     AVEEAEPRQHFLLTRAWLEAENGDLDQALESVEAAADVFGPRTRAGDHSPQLLTRLLR
                     YRFSDHARGRIDAWRHALNDRTRRKQG"
BASE COUNT          396 a          920 c         1037 g          455 t
ORIGIN      
        1 ctacgacgcc gtctacatcg cgctggcaga agccctcgcc gtgccgctgg tcacgacgga
       61 cgagcgcctc tcgcgcactc ttggtcatga cgtggcgatc gagctcgtcg cgatcgtgca
      121 cggcgggtga aggggtcgcg ccgtacggcg atcgcgttag ccctgcttgc gtcgcgtccg
      181 gtcgttgagc gcgtggcgcc aggcgtcgat gcggccgcgc gcgtggtcgg agaagcggta
      241 gcggagcagg cgcgtcagga gctgcggcga gtggtcgccg gcgcgcgtgc gcggaccgaa
      301 gacgtcggcg gccgcttcga cggattcgag cgcttggtcg aggtcgccgt tttcggcttc
      361 gagccaggcg cgcgtgagca ggaagtgctg gcgcggctcg gcctcctcca cggcgatgcg
      421 gctgcattct tcgagcagct cgcgggcgcg cgccgtgtca tgacggaaga gcgcgatctg
      481 gcagaagagg agcttggtct ccatcacgcc ccagggatcg ttggtcttgg cgtacgtctt
      541 gtgggcgcgc gtcgcgtaaa gctctgccat ttcgaggtcg tcagtatcga gaccgaccat
      601 ggcgagcaag cgatcgcagg cggcctggcc gcgcggagtg cggagcgtct cgaacacgac
      661 gagcgcttcg agcgcgccgg tctcggcgcc gtggtagttc atcaagcggt gctcgatgtg
      721 ggcgagcgaa acgtcggcct gagcggtgcc taggcggtaa ccggcgcgct cgaactcgcc
      781 gcgcgcctcc tgcgcgaagc ggcgcgaacg ctcggtcgca ccctcggagt gctcgatcca
      841 cgacagcaag agcaggcatt ggccgcgacc gagcggttgg tcgagctcgg cgaaggcgcg
      901 ctcggcctgc acgatggtgt cgcgcgcctg ctcgtagtcg ccgagttggt attcgatttc
      961 gccggccgcc gattggcaga gcgccttgcc gaggacgtta ccgagcgagt cgaacgtgat
     1021 gaaggcgcgc cggacgagat cgagcccttc ggcggagccg ccctgttcgc tcgagagctg
     1081 accgagcagg cgctggcaat gggcgatgtt ttcgttgtcg ccgagctctt cgaagcgagc
     1141 gcgcgcgagc tcggcgtacg tgttcgcttc cgccatgcgc ccgatgtggc gcagcgcttc
     1201 ggcttgccag cgattcttca aggcgagcgt gcggccgcgc agcttgccct tcaagagctc
     1261 gaggtcggcg agcgtggcga gcggctcgcg cgcgccgttc cagctctgtt gcaggaagtc
     1321 gaagagcagg agcgcggccg tgtccgagtc gttcgcctcg atcaggttca ccatgcgctg
     1381 gcgcacgatg cggcgctgac cggcgagcgg atggagcgtg agcgccgcgg ccgcggctcg
     1441 atagatcttc tcgcgatcgg gccgcgtttg cagccgcatc agcaggtgct cctgcaagag
     1501 ctcgtgcggc cagctgtaac gaccgggccc gcgcgggatc agaacttccg cgttcgagag
     1561 gctcagcatc gcgctgtcgg cgggctgtcc gagcgagctc aagagtgcat ggagcacgtt
     1621 gcgccgcaca tcgccgccga gcgtcgccgc cgcgtaggcc gcgacgcgat gctgctcggg
     1681 cacggaagcg agccggctgt cccagagctc ggccgtcgtc tgcgggcgca cgctcagcac
     1741 gtcgggcggc acgcggtaga cgttgcccgc aaattccatg tggcccgaca gcgcccacgc
     1801 gtgcagctgc tgcagcgcga agagcggatt gccgcggctc cggcgcgcgg cttcctcgac
     1861 ggctgcgtcg tcgagcggga tcgaggagcg gatgagctcg accgtgcgct ccggcgtgag
     1921 cggcggcact tcgatcacgg tgccgttcgt cgcctcgcgc agctgccgca agcggtcggc
     1981 ggccgacgtc ccgagcgcga cttcctccga gcgcgccgtc gcgagcatca tgatgcgctg
     2041 gtcgggctcg tcctcgagga tgcgcagcag gccgtccatc gtggccggcc ccgtgttgtg
     2101 caaatcgtcg agccagaaca acaggggccg cttgttcgcg atcttccgca gcgtgtagcg
     2161 gatgaccatg cgccgggttt ccagcgtgtc gagcgtgaag cgaatgccgc tcggcccgat
     2221 cgcttgctcg gagcccatgg gccgcatcca ctcggcggcg cccgcgaccc aggcgcgacc
     2281 gttcttgtcg tcgcgccgca ccttccagcg atcgagcagc gaacgctcga tcgtgtggcg
     2341 atcgacgcgc tcgaagttgt agtaggcgag ggcggcgccg agcatgccgt cgagcgggct
     2401 ccggatcgcg cgataacgcg cgcggagcgg caccattttg ccctcttcgt gcatcgtttc
     2461 gcagagccac tccgcgatgc ggctcttgcc cgcgcccgct gggccgacga ggagcgcgag
     2521 ccggtgcggc gggccttcgc cgctcacgag ctcgttgcag agatcgcgca gcgaacggcg
     2581 gatgtcctcg cgaccgacga gcgggctcgg acgaatgctc aagagtcctg gcgggcgatc
     2641 gggcgcgggc tcgagatcgg ggttcggcgc gcgcgcgccg ctcggccgcg tgactgggcc
     2701 gggctcgctc ccgcgcgaag gcatttggaa gcgccacgcc gacggatcgg cgatggacgg
     2761 ctggaagcgc gcccaattgc ggcgtgcttc cgcggcgaac tcccagcg
//
LOCUS       DATIML010000875         1566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1633004, whole genome shotgun sequence.
ACCESSION   DATIML010000875 DATIML010000000
VERSION     DATIML010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1633004"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1019)
                     /locus_tag="VLJ38_15215"
     CDS             complement(<1..1019)
                     /locus_tag="VLJ38_15215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40928.1"
                     /translation="MSCRETRAVEALHDGRLPPEHAEALRLHLVTCAVCSSEAGRLEL
                     LSATLTALPDPESSKERVAAGRQRLLDSARRLGEKPSPSVGRMAGFALAACAAVTAAS
                     FGLERAKVRPHEPVAVRAVAAAANELVLTVTPAAGTTWSRASSNLAETLALTDGELAV
                     RVSRHAAARRLLVTLPDGELEDVGTVFSVEVHAGKTRAVSVSEGRVALRLRGRSELLL
                     SAGESFHAPDEDAVRAPSAPPPSAPLPSEAAPSADERTASEPRPAVNTRGGSRPGSAS
                     EEAHACPSRTLFQDGVQAFKRGEYGTAATLLERFSAACGHGNHGEDAAYLRMVALARA
                     GRRAEA"
     gene            complement(1016..>1566)
                     /locus_tag="VLJ38_15220"
     CDS             complement(1016..>1566)
                     /locus_tag="VLJ38_15220"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU40929.1"
                     /translation="DAPALPDADALAMQRLARGEVDALGELYDRHQAAVRRFATRMTQ
                     SADDGADLVHATFLAALKTAKNFDTSRSCRAWLLGITARLVHRQRTTGARWSRLLGAF
                     RPPEPAWTRDPESTLGDRQGLERALSRLSHAKRSVLLMAELEGLRGEEIAEALAIPVG
                     TVWTRLHHARRELLAALGEERS"
BASE COUNT          219 a          560 c          553 g          234 t
ORIGIN      
        1 gcttccgcac gacggccggc gcgagcgagc gccaccattc gcaaatacgc cgcatcctcg
       61 ccgtggttac cgtggccgca agcggcggag aaccgctcga gcaaagtcgc tgccgtcccg
      121 tactcgccac gtttgaacgc ctgcacgccg tcctggaaca acgtccggct cggacaggcg
      181 tgcgcctcct cgctcgccga acctgggcgt gaaccgccac gggtgtttac cgctggacgg
      241 ggttcgctcg ctgtcctttc gtccgcgctc ggggcggcct cgctcgggag cggagcgctc
      301 ggcggcggag cactcggagc tcggactgcg tcttcgtccg gcgcatggaa actctcgccc
      361 gccgagagca gcagctcact gcgaccgcgc aaccggaggg caacgcgtcc ctcgctcacg
      421 gagactgcac gcgtcttgcc ggcgtgtacc tcgacgctga acacggtgcc cacgtcctcg
      481 agctcgccgt ccggcaaggt cacgagcaag cgccgggccg cagcgtggcg gctgacccgc
      541 accgcgagct cgccatcggt gagcgcgagt gtttcggcca gattggagct cgcgcgcgac
      601 caggtggtgc ctgccgccgg cgtcaccgtg agcacgagct cgttcgcggc agctgcgacc
      661 gctcggacgg ccacaggttc atgcgggcga accttggcgc gctctagccc gaacgacgcc
      721 gccgtgaccg ccgcgcaggc agcgagcgca aaacctgcca tgcgcccgac ggacggcgac
      781 ggcttttcgc cgagccgtcg cgcagaatcg agcagacgct ggcggccggc agcgacgcgt
      841 tccttgctcg actcggggtc gggtagcgcc gtgagcgtcg cgctcaaaag ctcgagtcgc
      901 cccgcttcgc tcgagcagac ggcgcacgtc acgaggtgca ggcgcagcgc ttccgcgtgc
      961 tcgggcggta agcggccgtc gtggagcgcc tcgacggcgc gcgtctcccg gcagctcatg
     1021 atcgttcctc cccgagcgct gccaaaagct cgcgtcgcgc atgatgcagc cgcgtccaca
     1081 ccgtgcccac gggaatggcg agtgcctcgg cgatttcttc gccgcgcagc ccttcgagct
     1141 cggccatgag cagcacgctg cgtttggcgt ggctcaagcg tgagagggcg cgctcgagtc
     1201 cttggcggtc gccgagcgtg ctctccggat cgcgggtcca ggcgggttcc ggcgggcgaa
     1261 acgcgccgag cagccgtgac cagcgcgcgc cggtcgtccg ctgccggtgc acgagccgcg
     1321 ccgtgatgcc gaggagccag gctcggcacg agcgcgaggt atcgaagttc tttgccgtct
     1381 tgagcgcggc gaggaacgtc gcgtgcacga gatcggcacc gtcgtccgcg ctttgcgtca
     1441 tgcgcgtcgc gaagcgccgg acagcggctt ggtgccgatc gtagagctcg cccagcgcgt
     1501 cgacctcgcc ccgcgcgagt cgttgcatcg cgagcgcgtc ggcgtcgggg agcgccggtg
     1561 cgtcgc
//
LOCUS       DATIML010000876         1864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1346758, whole genome shotgun sequence.
ACCESSION   DATIML010000876 DATIML010000000
VERSION     DATIML010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346758"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VLJ38_15225"
     CDS             <1..391
                     /locus_tag="VLJ38_15225"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSU40930.1"
                     /translation="RMLTIPVETREREQLIDITSEVAKLARDIDEGVVWLHCPHTTAA
                     LTIQENADPALRVDYLEHLAKLVPQPGFRHDEGNADAHIKSSLIGTTQPVLVDKGKLV
                     LGRWQAIYFVELDGPRRRQVMARVSKA"
     gene            388..1545
                     /locus_tag="VLJ38_15230"
     CDS             388..1545
                     /locus_tag="VLJ38_15230"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40931.1"
                     /translation="MKRLVVATLFVVGCAHTSPTSTAQPEQHVTMEPMVFAEQPNGTV
                     ETVDAASLFERAGTAYGQKDYDAALALFDRVVRDWADSRYVVPSLYNAGLALEAKGDL
                     AAAAERYKRITVEHADSKDAIDAWYRLGFVQAQAKSWAAAVDTYGQILARKDLGLGDR
                     LEALARRGVAQFSARDLLAAEHTFRDELAYYHAHQTDERLESDFFVAMGAYYLGECAH
                     EQYRLLPVRLPEKQMARDLEAKARTLLVAQSRFLDAMRVDNVEWATAAGFQIGSLYRE
                     FYDDIVGAPVPPALTGEAREVYLEEVRKQVRTLLQKAVSIHEKNLLMAERSGEKNEWV
                     RRSNDQMEQLKKLLAPGPVAPQPPDAVEAPAEPQTPPLPRPRDEVKPPVVL"
     gene            1638..1710
                     /locus_tag="VLJ38_15235"
     tRNA            1638..1710
                     /locus_tag="VLJ38_15235"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1671..1673,aa:Thr,seq:tgt)
     gene            1744..1825
                     /locus_tag="VLJ38_15240"
     tRNA            1744..1825
                     /locus_tag="VLJ38_15240"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1778..1780,aa:Tyr,seq:gta)
BASE COUNT          356 a          650 c          562 g          296 t
ORIGIN      
        1 acgcatgctc accattcccg tggagacgcg cgaacgcgag cagctcatcg acatcacgag
       61 cgaggtcgcc aagctcgcgc gcgacatcga cgaaggcgtg gtctggcttc actgcccgca
      121 cacgaccgcg gcgctgacga tccaggagaa cgcagatccc gccctgcgcg tggattacct
      181 ggagcacctg gccaagctcg tgccgcaacc gggcttccgc cacgacgagg gcaacgccga
      241 cgcgcacatc aagtcgtcgc tcatcggcac gacgcagccg gtcctcgtcg acaagggcaa
      301 gctggtcctc ggccgttggc aagcgatcta tttcgtcgag ctcgacgggc cgcgccgccg
      361 tcaggtgatg gcgcgcgttt ccaaggcatg aagcgcctcg tcgtcgccac gctcttcgtc
      421 gtcggctgcg cgcacacgtc gccaacgtcg acggcgcagc ccgagcagca cgtgaccatg
      481 gagccgatgg tcttcgccga gcagcccaac ggcaccgtcg agaccgttga cgccgcgtcg
      541 ctgttcgagc gcgccggcac cgcctacggg caaaaagatt acgacgccgc gctcgcgctc
      601 ttcgatcgcg tcgtccgcga ttgggccgat tcgcgctacg tcgtcccgtc gctgtacaac
      661 gccggcctcg cgctcgaagc caagggcgac ctcgctgccg ccgccgagcg ctacaagcga
      721 atcaccgtcg agcacgccga ctccaaggac gccatcgacg cctggtaccg gctcggcttc
      781 gtgcaggcgc aagcgaagag ctgggccgcc gccgtcgaca cctacggcca gatcctcgcg
      841 cgcaaggatc tcggcctcgg cgatcgcctc gaagcgctcg cccgtcgcgg cgtcgcgcaa
      901 ttcagcgcca gggatctcct cgccgccgag cacaccttcc gcgacgagct cgcctattac
      961 cacgcgcacc agactgacga gcgtctcgag tccgacttct tcgtcgccat gggcgcctac
     1021 tacctcggcg agtgcgcgca cgagcaatat cgcctcttgc ccgtgcgcct gcccgagaag
     1081 cagatggcgc gcgatctcga agccaaagcg cgcacgctcc tcgtcgcgca atcacgcttc
     1141 ctcgatgcca tgcgcgtcga caacgtcgag tgggcgaccg ccgccggctt ccagatcgga
     1201 tcgctctatc gcgagttcta cgacgacatc gtcggcgcgc ccgtgccgcc ggcgctgacc
     1261 ggcgaggcgc gcgaagtcta cctcgaggaa gtccgcaagc aggtgcgcac gctcttgcaa
     1321 aaagcagtca gcatccacga gaagaacctg ctcatggccg agcgcagcgg cgagaagaac
     1381 gaatgggtgc gccgctccaa cgaccagatg gagcagctca agaagctcct cgcccccggc
     1441 ccggtggcgc cgcagccgcc cgatgccgta gaagcgcccg cagagccgca aacgccgcct
     1501 ttgccgaggc cgcgagatga ggtgaaacct cccgtagttc tgtgaaaagc cttgactgac
     1561 gcggcgcttc gatctatcaa actctccttt taaataggcc aagaggcaca ctgcgaacga
     1621 aatgtttttt gagtttcgct ggcgtagctc acttggtaga gcagctgcct tgtaagcagc
     1681 aggtaatggg ttcgattccc atcgccagct ctttggaaaa tgaaggagta aacaacgtca
     1741 ccgggagggg ttcccgagcg gccaaaggga gcagactgta aatctgccgg cattgcctac
     1801 gaaggttcga atccttcccc ctccacccac gaacgcgcgg gtgtagctca gctggtagag
     1861 ctct
//
LOCUS       DATIML010000877         5302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2785424, whole genome shotgun sequence.
ACCESSION   DATIML010000877 DATIML010000000
VERSION     DATIML010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5302
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2785424"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..755
                     /locus_tag="VLJ38_15245"
     CDS             27..755
                     /locus_tag="VLJ38_15245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40932.1"
                     /translation="MNRLSPLNLLLFAATLGLSALGCQSGGVGDPCTPEDEYRQVFNG
                     YAVTEVNVESKSFQCETRVCIVNHFQGRVSCPYGQTQDILDSGATPKPPTDTARCRIP
                     GTNGKHCLDASGKQSTDCPADGSGTNIDEITVPVDSQFVARSAQDTVYCSCRCAGPDP
                     AAKYCECPSGYACSELVRELGLPGKAELAGSYCVKNGTIYDPQGTIQSETCASEAEAI
                     KNTGKPVQTKYNVEQVCGPLGQNP"
     gene            760..1131
                     /locus_tag="VLJ38_15250"
     CDS             760..1131
                     /locus_tag="VLJ38_15250"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HSU40933.1"
                     /translation="MSATGDRHALGARAEALVADYLVADGYAIVARNLRIGALEIDLV
                     ARRGPIIAVVEVRTRGPGALTSAFGSIDAAKRERIRRAGERLWQRRYRRDLSVDRMRF
                     DVASVRFDVEPPTIEYVVAAF"
     gene            complement(1135..1953)
                     /locus_tag="VLJ38_15255"
     CDS             complement(1135..1953)
                     /locus_tag="VLJ38_15255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSU40934.1"
                     /translation="MAEAATATPGAGGRHQRRLKNYLLDPHFQFKYTSYLMLIAIALS
                     IGLGSLIWRTSNAVIAESKNAVHQGEEVVARGKEVVAESQKVSLVVQMNIVKDPVYSD
                     NPALLEAFKADAAKQDERLRAQQAELVKQAANLKQQSAELAARQTTMLYTLCGTLALL
                     VILIGAAGIVVTHRVAGPIYKMRANLRAVADGRLRVPTPLRKGDELVEFFETYRSMVI
                     SLRERQEEEIAKLVKAITTLESKAEPGELESLHALLRDMEAALEVKPSLQPAAS"
     gene            complement(2057..2863)
                     /locus_tag="VLJ38_15260"
     CDS             complement(2057..2863)
                     /locus_tag="VLJ38_15260"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU40935.1"
                     /translation="MLRARGPALLSAMAWMLVGRLSFAQTTSDVERMLDNLKNGGDFR
                     VRTQAALALGASHSPRATAALCGGLADPNITVRAAAAAGLGKLQLGGVDCLSARLAAE
                     PSETVKSAIQRALEQVKGGAAPAIGPNTKFYIAIGKTTDKSGRTGDGIDRMVHGSMAG
                     AASPLNIAIAPDAESAAEAKKVLAAHKGIKAFYLSPRIGPIEYGADTLKVRIEIAIFT
                     YPDKALLGNFAVPLTQQGVSGKDTASEDDLVKMAAERAIQKFPGIAAQIQ"
     gene            3078..4733
                     /locus_tag="VLJ38_15265"
     CDS             3078..4733
                     /locus_tag="VLJ38_15265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40936.1"
                     /translation="MIRVRGAARINATASALEGTVVVTGTVIDDTGRPVGGATLELRA
                     TAADGSAVPLPPFAACPNRPSSSPVSPPGPRPTRPLGSDASGRFCATFVTERATALVL
                     TFADARSLFDPAEQRVPIDSARRGVELRFAPTSATFELERETQRLQVSTHVVGAGPGL
                     SPPLPLAVYLATPKGEALVAQGACPADGATELEVASNRLGTPGPVELVLRFAGTPSLQ
                     PAESRRRVLATAEVRLALGRAPTAADPADGVPLELALESAAGPVNGGSVEARLQGQTV
                     GIAPVERGAAHLVAQFPRRADDATLEVRYLSVEPWWRPGATLKVEVKLLSRARWVSLG
                     WLSALGAIAAWLLWGWRRPAREGAARATPEPLAPIAGVHLVKREDDQPGWRGVVRDAH
                     DQAPIPRAVVELVARTPERRLIARAVADDLGRFELSGASDAELELAVSATWHTDFSSS
                     PPPHGELRVDLVSRRRYLVGRLVGWAERRGGQGRAGAEPTPGDVKRRGRRMHRDEVVA
                     WAAAVENAAFGPDPVDEKIEREVKRLEPPERADPNALEVKRDH"
     gene            4779..>5302
                     /locus_tag="VLJ38_15270"
     CDS             4779..>5302
                     /locus_tag="VLJ38_15270"
                     /inference="COORDINATES: protein motif:HMM:NF014880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HSU40937.1"
                     /translation="MLAVYVLIAVIAVLVVYFLFLRKSGTETPAVTRPPPGPKLERKP
                     ADKRSQPPAGAEAVKSGTAPSATSPEPSPPPPPARKGRESVPPPRVVEVAPVAAVPGE
                     REQLVEGMRRGLAKSRDSEGFFGRLRALISGKRDIDATLVKEMEEVLLTSDVGVETTA
                     LLIDRVKQGLARGEL"
BASE COUNT          829 a         1825 c         1766 g          882 t
ORIGIN      
        1 aacagcacac tgacggtgcg aggacaatga atcgactttc ccccctgaac ctcttgctct
       61 ttgccgccac gctcggtctc tcggcgctcg gctgccagag cggcggcgtc ggcgacccgt
      121 gcacgccaga ggacgaatat cgccaggtct tcaacggcta cgccgtcacg gaagtgaacg
      181 tcgagagcaa atcgttccag tgcgaaacgc gcgtttgcat cgtgaaccac ttccagggcc
      241 gcgtctcctg cccctacggc cagacgcagg acatcctcga ttccggcgcg acacccaagc
      301 cgccgaccga taccgcgcgc tgccgcatcc caggcacgaa tggcaaacac tgccttgacg
      361 caagcggcaa gcagtccacc gattgtccgg cggacggttc gggcacgaac atcgacgaaa
      421 tcacggtgcc tgtcgactcg cagttcgtcg ctcggagcgc ccaggatacg gtttactgct
      481 cgtgccgttg cgcgggtccc gatccggcgg cgaagtactg cgagtgcccg agcggttatg
      541 cctgcagcga gctcgtgcgc gagctcggcc tgccgggcaa ggcggagctc gccggctcct
      601 actgcgtgaa aaacggcacg atctacgacc cgcaggggac gatccagagt gagacttgcg
      661 cgagcgaggc tgaggcgatc aagaacactg gcaagcctgt gcagaccaag tacaacgtgg
      721 agcaggtctg cgggccgcta ggccagaacc cctgagcacg tgagcgcgac gggcgaccgt
      781 cacgctctag gagcacgggc ggaagcgctc gtcgccgact acctcgtcgc agacggttac
      841 gcgatcgtcg cgcggaacct gcgcatcggc gcgctcgaga tcgacctcgt ggcgcgccga
      901 gggcccatca tcgccgtggt cgaagtgcgc acgcgcggac cgggcgcgct cacgagcgcg
      961 ttcggcagca tcgacgcggc caaacgcgag cggatccgcc gtgcgggcga gcggctgtgg
     1021 cagcgacgct accggcgtga tctcagcgtc gaccgcatgc gcttcgacgt agcgagcgtg
     1081 cgcttcgacg tcgagccccc caccatcgag tacgtcgtcg ccgcgttctg aacttcaact
     1141 cgcggcgggc tgcagcgacg gcttcacctc gagcgcggct tccatgtcgc gcaagagcgc
     1201 gtggagcgac tcgagctcgc cgggctccgc cttcgattcg agcgtcgtga tggctttgac
     1261 gagcttggcg atttcctctt cttgccgctc gcgcagcgaa atcaccatcg aacggtaagt
     1321 ctcgaaaaat tcgacgagct cgtcgccctt gcgcaacggg gtcggcacac gcagccgccc
     1381 atccgccacc gcgcgtaggt tcgcgcgcat tttgtagatt ggccccgcca cgcgatgcgt
     1441 gacgacgatg ccggccgcgc cgatcagaat gaccagcagc gcgagtgttc cgcacagcgt
     1501 gtagagcatc gtcgtctggc gtgcggcgag ctcggccgac tgctgcttca ggttcgccgc
     1561 ctgtttgacg agctctgctt gctgagcacg caggcgctcg tcctgtttgg cggcgtcggc
     1621 tttgaaggcc tcgagcaagg ccgggttgtc gctgtagacc gggtccttca cgatgttcat
     1681 ctgcacgacg aggcttacct tctgactctc ggcgacgacc tctttgccgc gagccacgac
     1741 ctcttcgcct tggtggacgg cgttcttgct ctcggcgatg acggcgttac tcgtccgcca
     1801 gatcagcgag ccgagtccga tgctgagcgc gatggcgatc agcatcagat agctcgtgta
     1861 tttgaactgg aaatgcgggt cgaggaggta atttttgagc cggcgctggt ggcggccccc
     1921 ggctccgggt gttgcggtcg cggcttctgc catctctctg ctcctcgaac ctcgccgctc
     1981 gtcgagcggc aaaaatccca cccttagcgt atgccctcgc gttcggaacg agcaagaact
     2041 cgcgcgggtt tcgtggtcat tggatctgcg ccgcgatgcc cgggaacttc tggatggccc
     2101 gctcggcggc catcttcacg agatcgtcct ccgaggccgt gtctttgccc gaaacgccct
     2161 gctgcgtgag cggcacggca aaattgccga gcaacgcctt gtccgggtac gtgaagatgg
     2221 cgatttcgat gcgcaccttc agcgtgtcgg cgccgtactc gatggggccg atgcgcggcg
     2281 acaagtagaa ggccttgatg cccttgtggg ccgcgagcac ctttttcgcc tcggctgcgc
     2341 tctcagcgtc tggcgcaatc gcgatgttga gcggcgacgc ggctcccgcc atcgagccgt
     2401 gcaccatccg gtcgatgccg tcgcccgtgc gccccgactt atcggtcgtc ttaccgatgg
     2461 cgatatagaa cttggtgttc gggccgatgg cgggtgcggc gccgcccttc acttgttcga
     2521 gggctctttg gatcgcgctc ttcaccgtct cgctcggttc cgcggctagg cgcgccgata
     2581 gacagtccac gccgccgagc tgcagcttgc cgagaccggc cgccgccgcg gcgcgcacgg
     2641 tgatgttggg atcggcgagc ccgccgcaga gcgcggccgt ggcgcgcgga ctatgcgagg
     2701 caccgagcgc gagtgccgct tgcgtgcgca cgcggaagtc tccgccgttc ttcaggttgt
     2761 cgagcatgcg ctcgacgtcg ctcgtcgtct gcgcgaagga aagccggccc acgagcatcc
     2821 aggccatggc cgagagcaac gcaggtcccc gagcgcggag catcgagcct gactctaaca
     2881 gatgtcgcat gtgaatcggc gcgcccgaaa gtccgagctc gtcgctttca tcgtacgctc
     2941 ccgctgcccg cttctccctc gattcgtccg gcggaagggg gcatttcgtg gcaaggattg
     3001 tcgcggtgca gaagcgcgca tttctcgtcg gttccgctct ccttctcgcg agtgaggtcg
     3061 ggctaagtgc gagtccggtg attcgtgtac gcggcgctgc gcgcatcaac gctacggctt
     3121 cggcgctcga aggtaccgtc gtcgttaccg gtacggtgat cgacgacacc ggacgcccgg
     3181 tcggcggagc aacgctcgag cttcgcgcca cggcggccga cggcagcgcc gtaccgttgc
     3241 cgcccttcgc ggcttgtccg aaccggccga gtagctcgcc cgtttcgccg cctgggccgc
     3301 gaccgacgcg gccgctgggc agcgacgcga gcggtcgctt ttgcgcaacg ttcgtcaccg
     3361 agcgtgcgac tgctctcgtg ctcacgttcg cggacgcgcg ctcgctcttc gatcccgccg
     3421 agcagcgcgt gccgatcgac tcggcgcggc gcggcgtcga gctcaggttc gcgccgacga
     3481 gcgcgacgtt cgagctcgaa cgcgagacgc agcgcttgca ggtgagcacg cacgtcgtcg
     3541 gagcggggcc cggcctgagt ccaccactgc cgctcgccgt ctacctcgcg acgcccaaag
     3601 gcgaggccct cgtcgcgcaa ggcgcctgcc ccgccgacgg cgcaaccgag ctcgaggtcg
     3661 cgagcaaccg cctcggcacg ccaggcccgg tcgagctcgt gctgcgcttc gcaggcacgc
     3721 cttcgctcca gccggccgaa tcgcgccggc gagtgctcgc cacggcggag gtaaggctcg
     3781 cgctcggccg ggcgccgacc gccgccgatc cagcagacgg cgtcccgctc gagctagcgc
     3841 tcgaatcggc ggctggaccg gtgaacggcg gctcggtcga agcgcgcctt caaggtcaaa
     3901 ccgtcggcat cgcgccggtc gaacgcggag ccgcgcacct tgtcgcacag tttccccgcc
     3961 gcgctgacga cgccacgctc gaggtccgtt atctcagcgt cgagccctgg tggcggcccg
     4021 gtgcgaccct caaggtcgaa gtgaaactgc tgtcgcgggc acgttgggtg agcctcggct
     4081 ggttgtcggc gctcggggcc atcgccgcct ggctgctgtg gggctggcgt cgtcccgccc
     4141 gcgaaggagc agcacgagca acgcccgaac cgctggcacc gatcgcggga gttcacctcg
     4201 tgaaacgcga ggacgatcag cctggctggc gcggcgtcgt tcgcgacgca cacgaccaag
     4261 cccccattcc tcgcgccgtg gtcgagctgg tcgcccggac acccgaaagg cgcttgatcg
     4321 cgcgcgccgt ggccgatgac ctcggccggt tcgagctctc gggcgcctcc gacgccgagc
     4381 tcgagcttgc cgtcagcgcg acgtggcaca cggatttttc gagcagcccg ccgccacatg
     4441 gcgagctccg agtcgacttg gtttcgcgcc gccgttacct cgtcggtcgt ctcgtcggct
     4501 gggcggagcg acggggaggc cagggtcgcg cgggggccga acctacacca ggcgacgtga
     4561 aacgtcgcgg ccggcgcatg caccgggatg aggtggtcgc ctgggcggcc gcggtcgaaa
     4621 acgcggcgtt cggtcccgat cccgtcgacg aaaagatcga gcgcgaggtc aagcgcctcg
     4681 agccacccga acgggccgat ccgaatgcgc tcgaggtgaa acgcgaccat tgacgggcca
     4741 aacccggcgt tcctatagtc cgccgcccaa ggccgccgat gctagctgtc tacgtcctca
     4801 tcgccgtcat cgcggtcctg gtcgtctact tcctgttctt gcgtaagagc gggaccgaga
     4861 cgccagccgt aacgcggccc ccgccaggcc cgaagctcga gcgcaaaccc gccgacaagc
     4921 ggtcgcagcc gcccgcgggc gccgaagcgg taaaatctgg gaccgctccc agcgccacga
     4981 gcccggagcc gtcaccgcca ccgccgcccg cgcgcaaagg gcgcgagtcg gtgccaccgc
     5041 cgcgtgtggt cgaagtcgcg cccgtcgcag cggtgcccgg tgagcgcgag cagctcgtcg
     5101 agggcatgcg ccgcggtctc gctaaatccc gcgacagcga gggcttcttc gggcgcctgc
     5161 gcgcgctcat cagcggcaag cgcgacatcg acgcaacgct cgtcaaggag atggaggaag
     5221 tgctcctcac ctccgacgta ggcgtcgaga cgacagcgct cttgatcgac cgcgtcaagc
     5281 aagggctcgc tcgcggcgag ct
//
LOCUS       DATIML010000878         2261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3937260, whole genome shotgun sequence.
ACCESSION   DATIML010000878 DATIML010000000
VERSION     DATIML010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3937260"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..1110
                     /locus_tag="VLJ38_15275"
     CDS             79..1110
                     /locus_tag="VLJ38_15275"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSU40938.1"
                     /translation="MSKTETSQPILFTDLVEPPAADSKRRKLERLVLPAPVRPELVEL
                     AAALPAHVSLGTMSWSYPGWRGVVYAADADAKQLAKSGLRAYVQNPLLTAVEIDRTYY
                     EPVPVEALRAYAEQVPAGFRFVVKAHEACVVQRFPTHPRYGKRAGEQNPLYLDAAHAV
                     DNVVQPALAALGEKLGVVVFQFPPEDVGAPAAFARRLGAFLQRLPAGAVYAVELRNRA
                     LFGAEYAAALVDAGAVHCHNVWGDMPSASLQARQLAPPTRRPLLVRWLMRRGESYQSA
                     GERYLPFDRLVEEDVPNREDIARLVARAAEHGVPSFVMLDNKAEGCAPETAVRLARAI
                     VAARRPSAP"
     gene            1156..1701
                     /locus_tag="VLJ38_15280"
     CDS             1156..1701
                     /locus_tag="VLJ38_15280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF99 family protein"
                     /protein_id="HSU40939.1"
                     /translation="MIGFDDAPFEKRRRGDVRLVGVVCARTRLDGVVSGFVRRDGRNS
                     TARMIELVTRSQFRKHVRAVLLQGIAVAGFNVVDVQALHRALGVPVLVLMRRRPRFAL
                     IHDALFGHTPGAARKWSLIERAGPVEPLGALYCQRVGLTFADAAELVAATTLHGNLPE
                     PLRLAHLIAGGVTTGTSRGRA"
     gene            complement(1755..2072)
                     /locus_tag="VLJ38_15285"
     CDS             complement(1755..2072)
                     /locus_tag="VLJ38_15285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40940.1"
                     /translation="METLEQRLELIDRHLARCATALATESKASPVFVAVFRELEQKLG
                     KLKAVMNGDRRLARESLVETEQAADSMKIAAQADTGLTPAAVELARVAHDSLCVLKHE
                     WQG"
BASE COUNT          318 a          736 c          804 g          403 t
ORIGIN      
        1 gtggtcgaat ttatacgacc acggtgttca ggtcatcccc cgcgccggga gttccggcgc
       61 gcgtacactg ctggccgggt gtcgaagacc gagacctcgc aacccatcct gttcacggac
      121 ctcgtcgagc cacccgccgc ggactcgaag cgcaggaaac tcgagaggtt ggttttgccg
      181 gcgccggtgc ggccggaact cgtggagctc gcggccgcgc tgccggctca cgtgagcttg
      241 ggtacgatgt cttggtctta tccaggctgg cgtggggtcg tgtacgcggc ggacgccgac
      301 gcgaagcagc tcgcgaagag cggactacgc gcttatgtgc aaaatccgct gcttacggcc
      361 gtcgagatcg atcggacgta ctacgagccg gtgccggtcg aggcgctgcg tgcgtacgct
      421 gagcaggtgc ctgctgggtt tcgcttcgtc gtgaaggcgc acgaggcttg cgtcgtgcag
      481 cgctttccga cgcacccgcg ctacggcaag cgcgcaggcg agcaaaaccc gctctatctc
      541 gacgccgcgc acgccgtcga caacgtcgtt cagcccgcgc tcgccgcgtt gggagagaag
      601 ctcggcgtgg tcgtgtttca gtttccgccc gaggacgtgg gcgcgccagc ggcgttcgcg
      661 cggcgactcg gagcattctt gcaacggttg ccggccggcg cggtgtacgc cgtcgagctg
      721 cgcaatcggg cgctgttcgg cgccgagtac gcggccgcgc tcgtcgatgc tggcgccgtg
      781 cattgtcaca acgtctgggg cgacatgccg agtgcttcgc tacaggcgcg gcagctggct
      841 ccgccgactc ggcggccgct gctcgtgcgc tggttgatgc gccggggcga gagttatcag
      901 agcgcgggcg agcgttacct gccgttcgat cgtttggtcg aggaagacgt gcccaatcgc
      961 gaggacatcg cgcgcctcgt tgcgcgcgcg gcggagcacg gcgtcccgtc gttcgtgatg
     1021 ctcgacaaca aggcggaagg ctgcgcgccg gagacggcag tgcggctggc gcgtgcgatc
     1081 gtggcggccc gccgcccgtc agcgccgtga gcctggtgct agcctcggct caccctgtcg
     1141 cgctcgctga gcaacgtgat cggcttcgac gacgcgccgt tcgagaagcg gcggcgcggc
     1201 gacgtacggc tcgtcggcgt cgtgtgcgcg cgcacgcggc tcgacggcgt cgtttccggc
     1261 ttcgtgcgtc gcgacggccg gaattcgacg gcgcgcatga tcgagctcgt gactcggagc
     1321 caatttcgca agcacgtgcg cgcggtgctg ttacaaggca ttgccgtggc cggcttcaac
     1381 gtcgtggacg ttcaggcgct gcatcgcgcg ctcggcgtgc cggtgctcgt gctcatgcgg
     1441 cgacgtccgc gcttcgcgct gatccatgac gcgctcttcg gtcacacgcc gggcgcggcg
     1501 cgcaagtggt cgctcatcga gcgtgcggga cccgtcgagc cgctgggtgc actctattgc
     1561 cagcgcgtgg gactcacgtt cgcggacgcg gctgagctcg tcgccgccac gacgctgcac
     1621 ggtaacttgc ccgagccgct gcgcctcgcg catctgatcg cgggcggcgt cacgacgggg
     1681 acgagtcgcg ggcgggcgtg aacggcctga aatgcggtcg agcgtgacct gaccccgccg
     1741 gcttaggccg cggcctaccc ctgccactcg tgcttcaaca cacataacga gtcgtgcgcg
     1801 acgcgcgcga gctcgaccgc ggcgggggtg agtccagtgt ccgcttgcgc tgcgattttc
     1861 atgctgtccg cagcctgctc ggtttcgacc aagctctcgc gagcgagccg gcggtcgccg
     1921 ttcatgacgg ccttgagctt gccgagcttc tgctcgagct cccggaaaac ggcaacgaac
     1981 accggagaag ccttggactc tgtcgcgagc gccgtcgcgc aacgtgccag gtgacggtcg
     2041 atgagctcga ggcgttgttc cagggtttcc atggcttctc cgtttagtgc ggccagcaag
     2101 cggagtgagg ctagccgagt cgcgcttcga gtaccatgtt gaacggcgtt tcggtggcgc
     2161 gtcgcagcga ggaaaagccg ccctgtttga cgatgacgtc gcgcagccgc tcttcgccgg
     2221 cctgggctcc gagcgcaggg ccctgtgccg acaaagaatg c
//
LOCUS       DATIML010000879         6012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3077360, whole genome shotgun sequence.
ACCESSION   DATIML010000879 DATIML010000000
VERSION     DATIML010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6012
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3077360"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2757
                     /locus_tag="VLJ38_15290"
     CDS             <1..2757
                     /locus_tag="VLJ38_15290"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU40941.1"
                     /translation="DLYIAQIANNQEKTWKIEAGLALARLYDERFGLLGKAIEELEKV
                     LELEPSHPGALGAIAALKARMGDAQSAVAAMERLADAAATPVERAEHFVRAADLLHDR
                     GDAHGAIAVLKRALDAAPDHVGASKKLIAAYVEVGHHAAAVDLLEERLSGTKGERARA
                     AVAGEIALICHLYLQDDERALAMAQVALHLDPTNLDALRVQGRVAYRAGRFAEAASRL
                     QPVVTQPEALPADELGETVFSFIDALAKSGAPERALAAVDHFFDIVSASAAWLLPVCE
                     ISAEHGSPSRTAELVRRLIAEHADELDAAEEGLARRLLGQALIKLGRADQALPELARA
                     VDLDPNSRPALRAFADALAETGDYQRAVDLRRREVELAQGVERVTLLVDLGELVADKI
                     GDSDYAGRCFLLALDEAPNDRRILTRLMQLFSAEKDWSRLLEVVVRLAELVDDPKQRA
                     KYLHTAAMVAAREIGDPRQALGLLDDALRSDPTHEAATMEALAIRRRLGDWDGIKDLL
                     KPRAQQLAAAGRHEELLRVLEELGETYARLGSIEQATRVYESALDVEPDGVRWLERLA
                     RTYASDPDRYLDRAKDALALWIEVDPYRPEPYQILRRMYTQARLADGAWLAAQALHVL
                     GQAQPDESRFFARFRSTELVAARRRLTPGEFMEFVMPADSEPLITSLFSLIEPYVLAT
                     RGRPESAYGLGLEDELDMQRYPHGLVYAFYHGSQIFPADEPRIFQRTSDPSRVTPLMT
                     PSPSVVLGAGAFAEGMGPLESAFIAGSELAHSMPGLRLRTLLPNMTSLKSWLLGAIRL
                     VKPKFPVAGELEASVIDAARVLETAATGEYRDHLVHTVSKLLQDSAALDLKRWMRAVD
                     QTADRAGLILSGDLDVSVALIRREPARQGALDAVSRARDLLVYSVSPAHVEARERIAV
                     NVDA"
     gene            2962..4395
                     /locus_tag="VLJ38_15295"
     CDS             2962..4395
                     /locus_tag="VLJ38_15295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40942.1"
                     /translation="MVPRAVPPPPALCAELLAHATSGCAPSGPARPSLAAALSNDDLG
                     ARDAALACLEASEDVPAGSIRALRAELAPEPCADALVAPLLETPPKGMTPELESALLG
                     LTISARLARLLSDPPQLEGPVDKQRFMTFLSDTLSPWVVGEAAAIEKLSRDGARLSGY
                     GRGVAALAAGNADLRFVQMAREVPLPEAMKADKAVADAYYGELDQALEPRKVRGRDAA
                     LVGLRTFAELGAARDERVSRARRLLNELWAGSRIDALDRLLLPELEPLDTATPERVLA
                     ARLPAFYTKLLLADVDPSEPKLLRALLEHGVPPPLRAKLDAAKLSDAARTLYARALVD
                     SGRRYFRAADFRQARVVIGTPSGELARLLAAIAQALETGPSDATELMLKGPLVRGTGD
                     VSALDAEAARHGKYAGFAAFDAALVLALAPKQDDPAFWDELGRRFDRADKLLSALPHP
                     PPELAGQKVRDFAEAARATAFALRTKK"
     gene            complement(4364..>6012)
                     /locus_tag="VLJ38_15300"
     CDS             complement(4364..>6012)
                     /locus_tag="VLJ38_15300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40943.1"
                     /translation="WQGHGLIDPAFRNPDVAGIAYDARLLLHGELPYVAAAEIKPPGA
                     FLLFAPALALGGMRAVWAMAVLWGSALSLATGALAGAAWGRAAGPRAAVLHAACAVIA
                     SDGDINYSFWMATPFTLAAASAMAATLAPNARRAAALWFTTGVSAMLAVAIKPSAWPV
                     GLLFVGLLARELTARRWQGVVRAACAGVAGALFTAGLIVLPYAFAGELRGLEAGLHDV
                     ATFGGEYVAVVAQALGGRLRAVLAGLPCTFEQIPGLCALAALGASELFPRGRATPPLA
                     LGAWLFAVGSFVGVSYTLRFYSHDNVQLWPALAVLAVRPAGLLARGLDRLERASVPSV
                     GTTLPLAATLLLGLAAAWPSFGQRWGYVHFMAERDHMVEDICHELAPRLPPGEPVLGW
                     GWSAWSVYEHCERRAPGRIFKVMASVTTVNTNTCNNGFGPMLLRSDAAPSRFFAEIEQ
                     HPPALFLWSSYFTEMGGDPLDDFTALRTFLKARYSIVDARGPFVALLRSDLLPAAPSV
                     LTELERGPFERGLPWRARGEPALVDGAERSFTSSCAARTP"
BASE COUNT          916 a         2188 c         2076 g          832 t
ORIGIN      
        1 gacctctaca tcgctcaaat cgcgaacaac caggaaaaga cctggaagat cgaggccggc
       61 ctcgcgcttg cccggctgta cgacgagcgc ttcggcttgc tcggcaaggc gatcgaggag
      121 ctcgagaagg tgctcgagct cgagccgtcg caccccggcg cgctcggcgc gatcgcggcg
      181 ctcaaggcgc gcatgggcga cgcacagagc gccgtggctg cgatggaacg cctggcggac
      241 gccgcggcca cgcccgtcga gcgcgccgag cacttcgtgc gcgccgccga cctcttgcac
      301 gaccgcggcg acgctcacgg cgccatcgcc gtgctcaagc gagcgctcga cgccgcgccc
      361 gatcacgtgg gggcgtcgaa gaagctcatc gccgcgtacg tggaggtcgg ccaccacgcc
      421 gccgccgtcg atctactcga ggagcggctc tcgggaacga agggtgaacg cgcgcgcgcg
      481 gccgttgcgg gcgaaatcgc gctgatatgt cacctctact tgcaggacga cgagcgcgcg
      541 ctcgcgatgg cccaggtagc gctccacctc gatcccacga acctcgacgc gctccgcgtg
      601 caaggccgcg tcgcttaccg cgcgggtcgc ttcgccgaag cggcgtcgcg cctgcagccg
      661 gtcgtcacgc agcccgaagc gttgccggcg gacgagctcg gcgagacggt gttctctttc
      721 atcgacgcgc tcgcaaaatc aggcgcgccc gagcgcgcgc tcgccgcggt cgaccacttc
      781 ttcgacatcg tctccgcgag cgccgcgtgg ctcttgcccg tctgtgaaat cagcgcggaa
      841 cacggctcgc cctcgcgcac cgccgagctc gtccgccggc tcatcgccga gcacgccgac
      901 gagctcgacg ccgcggaaga gggacttgcg cgtcgcctgc tgggccaagc gctgatcaag
      961 ctcggccgcg ccgatcaggc gctgcccgag ctcgcccgcg ccgtcgacct cgacccgaac
     1021 tcacggcccg cgctgcgtgc gttcgccgac gcgctggccg agacgggcga ctatcagcgc
     1081 gccgtcgatt tgcgccgtcg agaggtggag ctcgcgcagg gcgtcgagcg ggtgacgctc
     1141 ttggtcgacc tcggcgagct cgtcgccgac aagatcggcg acagcgacta cgcggggcgc
     1201 tgcttcttgc tcgcgctcga cgaagcgccg aacgaccggc gcatcctcac gcgcctgatg
     1261 cagcttttca gcgccgaaaa ggattggtcg cgcttgctcg aggtcgtcgt gcgcctcgcg
     1321 gagctggtgg acgatccgaa gcaacgcgcc aagtatctgc acacggcggc catggtcgcc
     1381 gcgcgtgaaa tcggcgatcc gcgccaggcg ctcggtttgc tcgacgacgc gctcaggagc
     1441 gatccgacgc acgaagccgc gaccatggaa gcgctcgcga tccggcgtcg gctcggcgac
     1501 tgggacggca tcaaggacct cttgaagccg cgcgcgcagc agctcgcggc cgcaggccgg
     1561 cacgaggagc tcttgcgcgt gctcgaagag ctcggtgaga cctacgctcg cctcgggagc
     1621 atcgaacagg cgacgcgcgt ctacgaatcg gcgctcgatg tcgagccgga cggcgtgcgc
     1681 tggctggagc gactcgcgcg cacctacgcg agcgatcccg atcgctacct cgaccgcgcc
     1741 aaggacgcgc tcgcgctctg gatcgaggtc gatccttatc ggcccgagcc gtatcaaatc
     1801 ctccggcgca tgtacacgca ggcacgcctg gccgacggcg cgtggctcgc cgctcaggcg
     1861 ttgcacgtgc tcgggcaagc gcagcctgac gaatcgcgct ttttcgcgcg ctttcgcagc
     1921 accgagctcg tggcggcgcg ccgcaggctc acgccgggcg agttcatgga gttcgtgatg
     1981 ccggccgaca gcgagccgct catcacgtcg ctattttcgc tgatcgagcc gtacgtgctc
     2041 gcgacgcgcg gccggccgga gtcggcttac gggctcgggc tcgaagacga gctcgacatg
     2101 cagcgttacc cgcatgggct cgtctatgcg ttctatcacg gctcgcagat ttttccggcg
     2161 gacgagccgc ggattttcca gcgcacgagc gacccatcgc gcgtgacgcc gctcatgacg
     2221 ccgtcgccgt ccgtcgtgct cggagcgggg gcgttcgccg agggcatggg cccgctcgag
     2281 tccgcgttca tcgcgggcag cgagctcgcg cattcgatgc cgggactccg gctccgcacg
     2341 ctcttgccga acatgacgtc gctcaagagc tggctgctcg gcgccattcg cctggtcaag
     2401 ccgaagttcc ccgtggcggg cgagctcgag gcgagcgtga tcgacgccgc gcgcgtgctc
     2461 gaaacggcgg cgaccggcga gtaccgcgac catctggtgc acacggtatc caagctcctg
     2521 caggacagcg ccgctctcga cctcaagcgc tggatgcgcg ccgtcgatca aaccgccgat
     2581 cgtgcgggtc tgatcctatc cggtgatttg gacgtgagcg tcgcgttgat tcggcgtgag
     2641 ccggcgcggc agggcgcgct cgacgcggta tcgcgcgcgc gtgacttgct cgtctactcc
     2701 gtgagccccg cgcacgtcga agcgcgtgag cgcatcgccg tcaacgtcga cgcctgagct
     2761 tgtcgtggcc gagctctggc tgcgtgcggc agagctcggt gtaagctccg ccgcatgcag
     2821 cgtgcgattc tctttgcggc gttcgtgacg gcctgtgcgg cggcgccgcc ccgagctgcc
     2881 gtcacccctg cgcctcccag ctccgaagcg tcccccgcgt cttctgcgcc gactgcggag
     2941 cagaagacaa agccgcccgc cgtggtcccg cgcgctgtgc cgccgccgcc cgcgctttgc
     3001 gccgagctcc tcgcgcacgc gacgagcggc tgcgctccgt caggtcccgc gcgcccgagc
     3061 ctggccgccg cgctctcgaa cgacgacctg ggcgcccgcg acgcggcgct cgcttgcctc
     3121 gaagcgagcg aggacgtgcc ggccggcagc attcgcgcgc tgcgcgccga gctcgcgccc
     3181 gagccgtgcg ccgacgcgct cgtcgcccct ctgctcgaga cgccgccgaa gggcatgacg
     3241 cccgagctcg agagcgcgct gctcgggctc acgatttcgg cgcgtttggc gcgattattg
     3301 agcgacccgc cccagctcga gggcccggtc gacaagcagc gcttcatgac gttcttgtcg
     3361 gacacgttgt cgccgtgggt ggtcggcgag gccgccgcga tcgagaagct gtcgcgcgac
     3421 ggcgcgcgcc tgagcggcta cgggcgcggc gtcgcggcgc tcgccgccgg caacgccgat
     3481 ttgcgcttcg tgcagatggc gcgcgaggtg ccgctgcccg aagcaatgaa agcggacaag
     3541 gccgtggccg acgcgtatta cggcgagctc gaccaagcgc tcgagccgcg caaggtccgc
     3601 gggcgtgacg cggcgctcgt cggcctgcgc accttcgccg agctcggcgc cgcccgcgac
     3661 gaacgcgtga gccgcgcgcg ccggctcttg aacgagctct gggcggggag ccgcatcgac
     3721 gcgctcgatc ggctgctttt gcccgagctc gagccgctcg acacggcaac gcccgagcgc
     3781 gtgctcgcgg cgcgcctgcc cgccttctac acgaaactcc tgctcgccga cgtcgacccg
     3841 agcgagccga aactcctgcg cgccctgctc gagcatggcg tgccgccgcc gctgcgcgca
     3901 aagctcgacg ctgcgaagct ctcggacgcg gcgcgcacgc tgtatgcccg cgcgctcgtc
     3961 gactccggcc ggcgctattt tcgcgccgcc gacttccgcc aggcgcgcgt cgtcatcggt
     4021 acgccgagcg gcgagctcgc gcgcctgctc gcggccatag cgcaagcgct cgagaccggt
     4081 ccctccgacg cgacggagct catgctcaag ggtccactcg tccgcggcac cggcgacgtg
     4141 agcgcgctgg acgccgaagc ggcgcggcac ggtaagtacg cggggttcgc cgcgttcgac
     4201 gccgcgctcg tcctcgcgct cgccccgaag caagacgacc cggcgttctg ggacgagctc
     4261 gggcgtcgct tcgaccgcgc cgacaagctg ctcagcgctc tgccgcatcc gccgcccgag
     4321 ctcgcaggtc aaaaggtgcg cgactttgcc gaggcggcgc gcgctacggc gttcgcgctg
     4381 cgcacgaaga agtgaacgac cgttcggcgc cgtcaacgag cgcgggctcg ccgcgggccc
     4441 gccacggcaa gcctcgctcg aacggccccc gctctagctc cgtcagcacg ctcggcgccg
     4501 cgggcagcag gtcgctgcgc aagagcgcga cgaaaggccc gcgcgcgtcg acgatcgagt
     4561 agcgcgcctt gaggaacgtg cggagcgccg tgaagtcgtc gagcgggtcg ccgcccattt
     4621 ccgtgaagta gctcgaccac aaaaataagg caggcgggtg ttgctcgatc tccgcgaaga
     4681 agcgtgaggg agctgcatcg cttcgcaaca gcatcgggcc gaagccgttg ttgcacgtgt
     4741 tcgtgttcac ggtcgtcacg ctggccatga ccttgaaaat gcggcccggc gcgcggcgct
     4801 cgcaatgttc gtacacgctc caagcgctcc aaccccaacc gagcactggt tcgccgggcg
     4861 gcaggcgcgg cgcgagctca tggcaaatgt cctcgaccat gtggtcgcgc tcggccatga
     4921 agtgcacgta gccccagcgc tggccgaaac tgggccatgc cgcggcgagg ccgagcagca
     4981 acgtcgctgc cagcggcaac gtcgtgccga ccgacgggac cgacgcgcgc tccaagcgat
     5041 cgagcccgcg cgcgaggagt cccgccgggc gcacggcgag cacggcgagc gccggccaga
     5101 gctgcacgtt gtcgtgcgaa tagaagcgga gcgtgtaaga gacgcccacg aacgacccca
     5161 cggcgaagag ccacgcgcct aaggcgagcg gtggcgtggc ccgccctcgc ggaaacagct
     5221 cgctcgcgcc gagcgccgcc agcgcgcaaa gtcccgggat ttgctcgaac gtgcagggca
     5281 gacccgccag tacggcccga agcctgccgc caagcgcctg cgcgacgacg gcgacgtact
     5341 cgccgccgaa cgtcgcgaca tcgtggagtc cggcttcgag gccacggagc tcacccgcga
     5401 acgcgtacgg caacacgatg agcccggccg tgaacagcgc gcccgcgacg cccgcgcagg
     5461 ccgcgcgcac gacgccctgc caacgcctcg ccgtgagctc gcgggcgagc aagccgacga
     5521 agagcagccc cacgggccac gccgacggct tgatggcgac ggcgagcatg gcactgaccc
     5581 cggtcgtgaa ccacagggcc gccgcgcggc gcgcgttcgg tgcgagagta gctgccatcg
     5641 cgctcgcggc agcaagcgtg aacggcgtcg ccatccaaaa cgagtagttg atgtcaccgt
     5701 cggaggcgat caccgcgcag gcggcgtgca gcaccgccgc gcgcggcccc gcggcgcgcc
     5761 cccaagcggc accggcgagc gctcccgtcg cgagcgacaa ggcgctgccc cagagcacgg
     5821 ccatggccca aaccgcgcgc atcccgccga gcgcgagcgc cggcgcgaac aagaggaacg
     5881 cgccgggcgg cttgatctcc gccgctgcca cgtaggggag ctccccgtgg aggagcaggc
     5941 gcgcgtcgta cgcgatgccc gcaacgtccg ggttccgaaa cgccggatcg atcagaccgt
     6001 ggccctgcca gc
//
LOCUS       DATIML010000880         2741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5676457, whole genome shotgun sequence.
ACCESSION   DATIML010000880 DATIML010000000
VERSION     DATIML010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5676457"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..590
                     /locus_tag="VLJ38_15305"
     CDS             153..590
                     /locus_tag="VLJ38_15305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40944.1"
                     /translation="MPPRPRPANRIAALRRVLLVLATTAATWLLVVSHLTTALHFALI
                     SHQICAVHGELVHGSTPVHARTSSGASTRENAAVVPGAEEEGHEHCPVLSRRHEHTAV
                     LAQPGVRVASAPSDCAAVITKRDGVAPSRGALLLAAPKQSPPA"
     gene            820..>2741
                     /locus_tag="VLJ38_15310"
     CDS             820..>2741
                     /locus_tag="VLJ38_15310"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HSU40945.1"
                     /translation="MPFRPKSRRFIARWAFALAASGSCIAHRATAAEVTPPTLVREVA
                     PEWPDTPADHDVVVPVVLTVRADGTVSNVAVNESRGADFDAAAVSAALAWRFAPALRD
                     GVAVAARIRAAVRFVAPLAATQPAPVAPPPATPARAPAPGSTSAARGSAPPAAPAEAP
                     PPSAGTPPAAPEAEVIVEGRAATPPRGASDYAVNVGELARVPRKNATELLKLAPGVYL
                     SNEGGEGHAERIYLRGFDAREGQDIEASVDHIPVNESGNLHGNGFADLHFIIPELVLS
                     LRVLEGPFDPRQGNYAVAGSADYETGLAQRGLTAKYTFGSYGTQRALVLWGPPGESTH
                     TYGGAEIFHTDGYGQNRDATHGRAMAQYEGRLGEHTLFWLSGAAYSGSYHSAGLLRED
                     EVTSGRKGFYDTADPRQGGDGTRFQLAADIETKAGDFVLYQQLFAIRRGMRLRENFTG
                     FLLDSQEAIQEPHLQRGDLIDMHVDESTFGGRGWARTQGKALGQTQELELGYFARGDR
                     VDATQQRIAAATNVPYHTDTALHSDLADVGLYGDVALRPLHWLTLRGGARVDLFSYDV
                     LDACAVQDVSAPDPSHPPGDTSCLDQQRGGAHREPNQRSSTASTKLMPRAALLFGPFS
                     HFSFSLAWGQGVRSIDP"
BASE COUNT          409 a         1024 c          873 g          435 t
ORIGIN      
        1 cgtctgaggc gtcgcagccg ttcgtgccgc cttgggcacc tgccgcagcg gcgcgcctat
       61 cgaagtgcgc gtcggggact agggtcacgc catggtgggg gcaagcctcg cttgcggcac
      121 gatttgcttt gtgtttgagt cgagccgctc cgatgccccc gaggccgcgc cccgcgaatc
      181 gcatcgccgc cctgcggcgc gtgctgctcg tgctcgcgac gacggccgca acgtggctcc
      241 tcgtggtgtc gcatctgacg acggcgctgc attttgcgct gatttcgcac caaatttgcg
      301 ccgttcacgg tgagctcgtg cacggctcga cccccgtgca cgcgcgtacg agctcgggcg
      361 cgagcacgcg cgagaacgct gctgtcgtgc cgggcgctga ggaagaaggg cacgagcact
      421 gtccggtgct gagtcgccgg cacgagcaca cggccgtgct cgcgcagcca ggtgttcggg
      481 ttgcctccgc tccgtccgac tgcgccgcgg tgattacaaa gcgcgacggc gtcgctccat
      541 cacgaggcgc gctgttgctc gccgcgccga agcagtcgcc gcccgcctga gccgcgctcg
      601 ttgcgcgtca acgcccggcg ttcgctcccg gcgcgcacgc gctgtcgatc tttgctcagt
      661 actctgctgg agacgcacgc cgcgctcacc cgcgcggtcg cgctctcttc cgtcaagccc
      721 gctcggcgcg tccatgccgc cgagcttctc cggcgtgcac tcgaccacag tcgtttcgag
      781 tcgcgccgcg agccgctgcg ctcgcgaccc gctcccctca tgccttttcg tccgaaatcg
      841 cgtcgtttca tcgctcgctg ggccttcgcg ctcgcggcga gcgggtcgtg catcgcccat
      901 cgcgcgacgg cagccgaagt gacgccgccg acgctcgtcc gcgaggtcgc tcccgagtgg
      961 cccgacacac ccgccgatca cgacgtcgtc gtcccagtcg ttctcaccgt tcgggcggac
     1021 ggcaccgttt cgaacgtcgc cgtgaacgag agtcgcggtg ccgatttcga cgccgcggcc
     1081 gtgagcgccg cgctcgcgtg gcgcttcgct ccagcgctgc gcgacggtgt agccgtggct
     1141 gcccgcattc gcgccgccgt acgcttcgtc gctccgctag cagcaacaca accggcaccg
     1201 gtggcccctc ctccagcgac gccggcgcga gctcccgcgc ccggatcgac ttccgcagct
     1261 cgcggctccg ctccgcccgc tgcgccagct gaagcgcctc ccccatccgc cggcacgccg
     1321 cccgcagctc ccgaagccga agtcatcgtg gaagggcgcg ccgcgacgcc tccgcgcggc
     1381 gcctccgact acgccgtcaa cgtcggcgag ctcgcgcgcg tgccacgcaa aaacgcaacc
     1441 gagctcttga agctcgcccc gggcgtctac ctcagcaacg aaggcggcga gggtcacgcc
     1501 gaacgcatct acctccgcgg cttcgacgcg cgcgaaggcc aagacatcga ggcgagcgtc
     1561 gaccacatcc cggtcaacga gagcggcaac ctgcacggca acggcttcgc cgatctccat
     1621 ttcatcatcc ccgagctcgt cctctcgctg cgcgtgctcg aaggaccctt cgatccacgg
     1681 cagggcaact acgccgtcgc cggcagcgcc gactacgaaa cggggctcgc ccagcgcgga
     1741 ctgaccgcca aatacacgtt cggatcctac ggcacgcagc gtgcactcgt gctctggggt
     1801 ccgcccggcg agagcacgca cacctacggc ggcgccgaga tctttcacac ggacggctac
     1861 ggtcaaaacc gagacgcgac acacggtcgc gccatggcgc aatacgaagg ccggctcggc
     1921 gaacacacgc tattttggct cagcggcgcc gcctattccg gctcgtatca cagcgccggg
     1981 ctcttgcgtg aagacgaggt cacgagcgga cgcaaaggct tctacgacac ggccgatccg
     2041 cggcagggcg gcgacggcac gcgctttcaa ctggcggccg acatcgaaac caaggcgggc
     2101 gacttcgtgc tctaccagca gctcttcgcg attcgtcgcg gcatgcgctt gcgtgagaac
     2161 ttcaccggct tcttgctcga ctcccaggag gcgatccagg agccgcacct gcagcgcggc
     2221 gatctgatcg acatgcacgt cgacgaatcg acgttcggcg ggcgcggctg ggcacgcacg
     2281 caaggcaagg cgctcggaca aacccaggag ctcgagctcg ggtacttcgc gcgtggtgac
     2341 cgcgtggacg cgacgcagca gcgcatcgcg gcggccacga acgtgccgta tcacaccgac
     2401 accgctctcc actccgatct cgccgatgtc ggtctgtacg gcgacgtggc cctgcggccg
     2461 ctgcactggc tcacgctacg cggcggggcg cgcgtcgatc tcttcagcta cgacgtgctc
     2521 gacgcctgcg ccgtgcaaga cgtctcggcg ccggacccga gtcatccgcc gggggacacg
     2581 agctgtctcg atcaacagcg cggcggcgcc catcgcgagc cgaaccagcg ttcgtcgacg
     2641 gccagcacga agctcatgcc gcgcgcggcg ctgctcttcg gaccgttttc ccacttttcg
     2701 ttttcgctcg cctggggcca aggcgtacgc tcgatcgatc c
//
LOCUS       DATIML010000881         2202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2208015, whole genome shotgun sequence.
ACCESSION   DATIML010000881 DATIML010000000
VERSION     DATIML010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2208015"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1169)
                     /locus_tag="VLJ38_15315"
     CDS             complement(<1..1169)
                     /locus_tag="VLJ38_15315"
                     /inference="COORDINATES: protein motif:HMM:NF013560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HSU40946.1"
                     /translation="MHRHRLPRRAVVPFAALALALASCRPAATPCPPPAAATLVAAHP
                     APPTVAEAEAFVKATNDEFKRLLLDADRASWVKATYITPDTEYLDAKAREVMLEFSTR
                     KIKAAERFEGLALPPDTARALYLLRYSDGVPAPSDPARRARLAELGTELESRYSEGKY
                     CSAKLKGLGDDKQSQCLTLDELNHVLENSGDYELSLEAWRGWHTVSAPMRAPYTELVA
                     LGNEGARELGFRDMAEIWRGGYDMSPEEFERETARLWDAVRPLYEKLHCFARARLAKK
                     YGESKVSRKGPIPAHLLGNMWAQEWQHLYPMLEPYPGHGGIDLTKALVQKKYDAKKMV
                     ETAEHFFVSLGMAPLPETFWQRSLFSKPRDREVECHASAWDLGMTGDLRVKMCIRV"
     gene            complement(1180..2013)
                     /locus_tag="VLJ38_15320"
     CDS             complement(1180..2013)
                     /locus_tag="VLJ38_15320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40947.1"
                     /translation="MPPGPQTVLPPPATAVPGAAVLQADSPERAVRQRLLGSHVHEYV
                     RRANVTEGFGYGFWVFSTAGTVLGVATIHEDAGLGATWTIGFGLTTLAAGCSMAASRD
                     TRVDIFDVLTLLDAGVAFLGVAVADDPGDMPRLSTAATTATFFAEGLLRSINHLARTS
                     HLTLLRADRDRLEHGQLSSAELAAVEARFLETEEPLGPGVLALPFFVGGGIALVPALD
                     GRHNSNEQTFSAVFGSLLALDGVFSLFIPSLVPHYKAGLSTAGLSLVAGPGQTGFRYR
                     F"
BASE COUNT          374 a          711 c          763 g          354 t
ORIGIN      
        1 acgcgaatgc acatcttgac gcgcaaatcc cccgtcatcc cgagatccca cgcgctcgcg
       61 tgacactcga cttcacggtc gcgcggcttc gaaaacaaac tgcgctgcca gaacgtctcc
      121 ggcagcggcg ccatcccgag cgaaacgaag aagtgctcgg ccgtctccac catcttcttc
      181 gcgtcgtact tcttctgcac gagcgctttc gtcagatcga tgccgccgtg cccggggtac
      241 ggctcgagca tggggtagag gtgctgccac tcttgcgccc acatgttgcc gagtaggtgg
      301 gcgggaatgg gacctttgcg tgagaccttg ctctcgccgt actttttggc gaggcgagcg
      361 cgcgcgaagc agtggagctt ttcgtagagc gggcgcaccg cgtcccagag ccgcgcggtt
      421 tcgcgctcga actcttccgg gctcatgtcg tagccgccgc gccaaatctc cgccatgtcg
      481 cggaatccga gctcccgcgc gccttcgtta ccgagcgcta cgagctcggt gtacggcgcg
      541 cgcatcggcg ccgaaacggt atgccagccg cgccaagctt cgagtgaaag ctcgtagtcg
      601 cccgaatttt cgagcacgtg attgagctcg tcgagcgtca gacactggct ctgcttgtcg
      661 tcgccgaggc ccttgagctt cgccgagcag tacttacctt cgctgtagcg actctcgagc
      721 tccgtcccga gctccgcgag ccgcgcgcgc cgcgcgggat cgctcggcgc cggcacaccg
      781 tccgagtagc ggagcaggta cagggcgcgc gccgtatctg gcggcagcgc gaggccttcg
      841 aagcgctcgg ccgctttgat cttgcgcgtc gaaaactcga gcatcacctc gcgcgccttg
      901 gcgtcgaggt actcggtgtc gggcgtgatg tacgtcgcct tcacccacga cgcgcggtcg
      961 gcgtcgagca ggaggcgctt gaactcgtcg ttcgtggctt tgacgaaggc ttcggcttcg
     1021 gcgacggtcg ggggcgctgg atgagcggcg acgagcgtcg cggcggcagg cggcgggcag
     1081 ggggttgccg cgggacggca actggcgagc gctaaggcga gcgcggcgaa cggaacgacc
     1141 gcgcgacggg ggagccggtg gcgatgcatg gagagcccct cagaagcggt agcggaaccc
     1201 cgtctgcccg ggacctgcga cgagcgacag ccccgcagtg ctgaggcccg ccttgtaatg
     1261 agggaccaga ctcggaatga agagcgagaa cacgccgtcg agagccaaca gagagccgaa
     1321 cacggcgctg aaggtttgct cgttcgagtt gtgacggccg tcgagcgccg ggacgagggc
     1381 gatgccgccg cccacgaaga acggcaacgc cagcacgccg ggaccgaggg gttcctcggt
     1441 ctcgaggaag cgcgcctcga cggctgcgag ctcggcggac gagagctgcc catgctcgag
     1501 ccggtcgcga tcggctcgca gcagcgttag atggctcgtg cgagcgaggt ggttgatgct
     1561 cctcagcaag ccttcggcga aaaacgtggc ggtcgtcgcg gcggtgctca gtcgaggcat
     1621 gtcgcccgga tcgtctgcga cagctacgcc gaggaacgcg acacccgcgt cgagcaatgt
     1681 caacacatcg aagatgtcga cgcgggtgtc acggctcgca gccatcgaac aaccggctgc
     1741 gagcgtggtg agtccgaacc ctatcgtcca agtggcgccg aggccggcat cttcgtgaat
     1801 cgtggcgacg ccaaggaccg taccggctgt gctgaagacc cagaagccgt acccgaagcc
     1861 ctccgtcaca ttggcgcgcc gcacgtactc gtgcacatgc gagccgagca atcgctgtcg
     1921 gacggcgcgc tccggtgagt ccgcctggag cacggcagcg ccgggtacgg ccgttgcggg
     1981 cggcggcagt accgtctgcg gccctggtgg catgggggag agcgccggag tcgtaggatt
     2041 gggcgatgcg gtgacggaat tcggtgccga cgagtcgggt ggcgcctcga atgtcgccgt
     2101 tggcacttga gtgttgcccg gtgccgcgcg tgctgaggca ctcaccgaca gcgcccctac
     2161 tgccaaaacc agaccaacac cgcgcccagc cacggtcccg ga
//
LOCUS       DATIML010000882         1760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4230259, whole genome shotgun sequence.
ACCESSION   DATIML010000882 DATIML010000000
VERSION     DATIML010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4230259"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..>1760)
                     /locus_tag="VLJ38_15325"
     CDS             complement(14..>1760)
                     /locus_tag="VLJ38_15325"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HSU40948.1"
                     /translation="GAGIARVNTDSPACPHRPRCPGCPLLELAYPAQLEQKTRVLARA
                     LALYPVLAGHTLEAPVAAEPVTAFRLRTKLVVEGRALGLFARGTHDVVDIPGCLVQRP
                     RLKAVLDALRAALPLPGPISSVDLREADEGVLVTAAVPPSLPARERRALAERIAALAP
                     HVASVAVSTRESDAPQLLGSALEVLVGPTELRHRPDPDAPWHYAAHGAFVQAHAGQLV
                     RLHGAVEAALTAPELGAASRSLAGVCVLELYGGSGALALRLAAHGARVTLVESFAPAV
                     RLAESAAREQGLELETLAADAGDALARFARENARFAAVIVDPPRRGLAVDVRRLIAAL
                     APERLIYVSCAPETLARDAAHLARLGYALVRATPFDMIPQTDAVETLARFVRRQPPAL
                     AVLAEDETFIAVDKPPHATVTAPAGAEHGVPLAVLDAAVSGVCLFARTPELARSLESA
                     VRDATAEYILLARGILRAGGTLSLAGRPSTARVRYERTRIVAGHSLVTVRAVPSDISP
                     LTRAFARIGHPVLGDARHGDRRSNAHFCHRYGLDRPFLHRRALELMLPPGRVRLEAPL
                     APDLEAVLAALEPAA"
BASE COUNT          262 a          578 c          711 g          209 t
ORIGIN      
        1 gatgtttttg gtcttacgcg gcgggttcca acgccgcgag tacggcttcg agatcgggag
       61 cgagcggcgc ctcgagcctg acgcgcccgg gcgggagcat gagctcgagc gcgcggcggt
      121 gaagaaatgg gcgatcgagg ccgtagcggt ggcaaaaatg ggcgttcgag cggcgatcgc
      181 cgtgacgtgc gtcgccgagc acggggtggc cgatgcgtgc gaaggcgcgg gtgagcggcg
      241 agatgtcact ggggaccgcg cgcacggtga cgagggagtg tccggcgacg atgcgggtgc
      301 gctcgtagcg aacacgtgcg gtcgatggac gtcccgcgag cgatagggtg ccgcccgcgc
      361 ggaggatccc acgcgccaag aggatgtact ccgccgttgc gtcgcggaca gcgctctcga
      421 gcgaacgcgc gagctcgggg gtccgcgcga agaggcagac gccgctcacc gcggcgtcga
      481 gtacggcgag gggcacgccg tgttcggcac ctgcgggcgc ggtgaccgtt gcgtgcggcg
      541 gcttgtcgac ggcgatgaac gtctcgtcct cggcgagcac ggcgagagcg ggcggctgtc
      601 gtcgaacgaa gcgagcgagc gtttcgaccg cgtccgtctg cggaatcatg tcgaacggcg
      661 tggcccgcac gagcgcgtag ccgagccgcg cgaggtgcgc ggcgtcacgc gcgagcgtct
      721 cgggcgcgca cgaaacgtag atcaagcgct cgggcgcgag cgccgcgatc aggcgacgca
      781 cgtccaccgc gagaccgcgg cgcggtggat cgacgatgac ggcagcgaag cgcgcgtttt
      841 cgcgtgcgaa gcgcgcgagg gcgtcccccg cgtcggcggc gagcgtctcg agctccagcc
      901 cctgctcgcg ggcggcgctc tcggcgaggc gcacggcggg tgcgaagctc tcgacgagcg
      961 tcacgcgcgc gccgtgcgca gccagccgca acgcgagcgc gccggagccg ccatagagct
     1021 cgagcacgca gactcccgcg agcgaacgcg acgccgcgcc gagctccggg gccgtgagcg
     1081 cagcttcgac ggcgccgtgc aagcgaacga gctgcccggc gtgcgcttgc acgaaggcgc
     1141 cgtgggcggc gtagtgccaa ggtgcgtcgg gatcggggcg gtggcggagc tctgtcggac
     1201 cgacgagtac ctcgagcgcg ctgccgagca gctgcggcgc gtcactttcg cgggtgctca
     1261 ccgcgacgct ggcgacgtgc ggggcgagcg cggcaatgcg ctcggcgagc gcgcgccgct
     1321 cgcgcgccgg caagctcggc ggcacggcgg ccgtgacgag cacgccctcg tccgcctcgc
     1381 gcaaatccac cgacgaaatc ggcccaggca acggcagcgc cgccctgagg gcgtccagca
     1441 ccgctttgag ccgcggccgc tgcacgaggc agcccggaat gtcgaccacg tcgtgagtgc
     1501 cgcgtgcaaa gagcccgagc gcacggcctt cgacgaccag ctttgtgcgc aggcgaaacg
     1561 ccgtgaccgg ctcggcggcg acgggggcct cgagcgtgtg ccctgcgagc acggggtaga
     1621 gcgcgagcgc gcgagcgagc acgcgggtct tctgctcgag ctgggccggg taggcgagct
     1681 cgagcaaggg gcagccgggg cagcgcggcc ggtgcggaca ggcgggcgag tccgtgttca
     1741 cgcgggcgat gccggcgccg
//
LOCUS       DATIML010000883         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_187796, whole genome shotgun sequence.
ACCESSION   DATIML010000883 DATIML010000000
VERSION     DATIML010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187796"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VLJ38_15330"
     CDS             <1..858
                     /locus_tag="VLJ38_15330"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HSU40949.1"
                     /translation="REALAERCGVEPDQIVLGNGAAELLWSLARCLLAPGSTALIAEP
                     TFSEFRSAASCCGALVREWRAAPEQGFALDLAALSAPGTRAVYLCSPNTPTGTALPAS
                     EIAEWAERQASPIVLDQSFLSLSERWQDAALKLPSNVVAVRSLTKDHGIPGVRLGYLI
                     GRRELCATVERSRPAWSTSALAQAAAIASCRSDEFVARSRERLLEDRRQLERELEALG
                     IESVPSQTNFLLARVPRVAELRARLLARHQILVRDCGSFGLPGFLRLAARPAPERARL
                     VAALRAEHH"
     gene            858..>1551
                     /locus_tag="VLJ38_15335"
     CDS             858..>1551
                     /locus_tag="VLJ38_15335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HSU40950.1"
                     /translation="MLARTLMVQGTASSVGKSLLVAALCRLFRQDGFDVAPFKSQNMA
                     LNSAVTPDGFEIGRAQAVQAEAAGLPASVDMNPILLKPEGAQRSQVVVLGRPLATLSA
                     REYHDYKPELQSVVAGSLERLRRRHQLVIIEGAGSPAEINLKARDLVNMHVARLAEAP
                     VLLVGDIDRGGVFASFVGTLELLEPHERALVAALLINKFRGDVRLLDSGLRFLEDRTT
                     KPVLGVVPYVRGL"
BASE COUNT          209 a          557 c          534 g          251 t
ORIGIN      
        1 cgcgaggcgc tggcagaacg ctgcggcgtc gagcccgatc agatcgtgct cggcaacggc
       61 gcagccgagc tgctttggtc gcttgcacgt tgtctgctcg cgcccggctc aacggcgttg
      121 atcgccgagc ccaccttctc cgagttccgc agcgcggcga gctgctgtgg ggccctcgtg
      181 cgcgaatggc gagccgcgcc ggagcaaggc ttcgcgctcg atctcgctgc gctctccgcc
      241 ccgggcacgc gcgccgtcta cttgtgctcg cccaacaccc cgaccggcac ggcgctgcca
      301 gcgagcgaga tcgccgaatg ggccgagcgc caggcgtcgc cgatcgtgct cgatcagtcg
      361 ttcctcagtc tgagcgagcg ctggcaggac gcggcgctga agctgccgag caatgtcgtc
      421 gcggtgcgct cgctgaccaa ggatcacggc atcccgggcg tgcgcctcgg ttacttgatc
      481 ggccgccgcg agctgtgcgc gacagtcgag cgctcccggc ccgcgtggag cacgagcgct
      541 ctggcgcaag cggcggcgat cgccagctgc cgctccgatg agttcgtggc gcgcagtcgg
      601 gagcgcctgc tggaagaccg gcgccagctc gagcgcgagc tcgaggcgct cggcatcgag
      661 agcgttccct cgcagaccaa cttcttgctg gcgcgcgtgc cgcgcgtcgc cgagctacgg
      721 gcgcggctgc tcgcacggca tcagatcctg gtgcgcgact gcggctcctt cgggctgccc
      781 ggcttcctgc gcctcgccgc gcggcccgct cccgaacgcg cgcggctggt ggcggcgctg
      841 cgcgcggagc atcactgatg ctggcgcgta ccctgatggt ccagggtacg gcctcgtccg
      901 taggcaagag cctgctcgtg gccgccctgt gccgcctgtt ccgccaggac ggcttcgacg
      961 tcgcgccgtt caagtcacaa aacatggcgc tcaactccgc cgtcaccccc gacggcttcg
     1021 agatcggtcg cgcgcaggcc gtgcaggccg aggcagcggg cttgcccgcg agcgtcgaca
     1081 tgaacccgat cctgctcaag ccggagggag cgcaacgctc gcaggtcgtg gtcttgggtc
     1141 ggcccctggc aacgctcagc gcgcgggagt atcacgacta caagcccgag ctgcaaagcg
     1201 tcgtcgcagg ctcgctcgag cgcctgcgcc ggcgtcatca gctggtgatc atcgagggcg
     1261 caggcagccc cgcggagatc aacctcaagg ctcgggacct ggtcaacatg cacgtggcgc
     1321 ggctcgccga agcacccgtg ctcctggtcg gcgacatcga tcgcggcggc gtgttcgctt
     1381 cgttcgtcgg caccctcgag ctgctcgagc cgcacgaacg cgcgctcgtc gccgcgctct
     1441 tgatcaacaa gttccgcggc gacgtccggt tgctcgattc cggcttgcgc ttcctcgaag
     1501 atcgcacgac gaagcccgtg ctcggcgtcg tgccgtacgt gcgcggtctg t
//
LOCUS       DATIML010000884         3196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1635082, whole genome shotgun sequence.
ACCESSION   DATIML010000884 DATIML010000000
VERSION     DATIML010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635082"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VLJ38_15340"
     CDS             <1..768
                     /locus_tag="VLJ38_15340"
                     /inference="COORDINATES: protein motif:HMM:NF023454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3516 domain-containing protein"
                     /protein_id="HSU40951.1"
                     /translation="HPKPNAEFLNTAFAAFAADHPWVVRENLKPKSVAREIVESLTPF
                     GSYVKEYGLMRSEGLLLRYLSEVYKTLVQTVPELARTPELDAATEYLGTIVRGVDSSL
                     LDEWQRLRHPERLLDVNAAGFEPEPDADDITRDRRVFTVLVRNLMFSLVRSLATRDYE
                     SFLDAVEYGNAEYAQLDVERALRPLFDSGVSIDLDANARSPQNTTLSERDDDAWDVNQ
                     ALLIAGEVSEYAIRGRIDLARSRRERRAVFLLDHVGA"
     gene            765..1172
                     /locus_tag="VLJ38_15345"
     CDS             765..1172
                     /locus_tag="VLJ38_15345"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU40952.1"
                     /translation="MSSDPDERRGWVEPDEIVNISSNAAQMPFGPFAHYCAGKAVLDM
                     YSRALALDLGPQGIRVNVVSPGPVITPGGDEARQAFSDATGAPADVFAQSVPLGRLGS
                     PDDVAEVVGLLVSDRANWMTGANMLVDGGMTAR"
     gene            2003..>3196
                     /locus_tag="VLJ38_15350"
     CDS             2003..>3196
                     /locus_tag="VLJ38_15350"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSU40953.1"
                     /translation="MGWRERLDWTMEAADGLKPVGLVHQVLGDGRLDGRQIDLPQGRV
                     VNFGNCSYLGLETDERLKRGACEAVERFGVVFSSSRAYASLPLYEELEALLSELGGGW
                     PVVVAPSTGVVHQAALPVLVEDGDAVCFDVMAHSTLHVTLPLLAARGIHCEPVPHDRI
                     DVLERRARRLAEKHRRVFYLCDGVYSMHGDVANLDALLDVLDRTPALFAYVDDAHGVG
                     WAGRHGAGVVLGERRLHPQMAVALSLNKAFAAGGGCLMLPEAELARRVFTCGGPLIFS
                     GPLPPAQLGAAIASARIHLSPELAVLQRELRSRIELFDLLAATAGIECVVRTRSPIRF
                     IELGSNERTSAVAAALLAAGFFVNVSVFPAVSRGHAGVRLMLTVNQTLEDVGRLVTEL
                     SQAVRR"
BASE COUNT          490 a         1036 c         1105 g          565 t
ORIGIN      
        1 catcccaagc cgaacgccga gttcctgaac acggcatttg cggcgtttgc ggccgatcat
       61 ccctgggtcg tgcgcgaaaa cctgaagccg aagtcggtgg cgcgcgaaat cgtcgagtcg
      121 ctcacgccgt tcggcagcta cgtcaaagag tatggcctca tgcgctccga agggctgctc
      181 ttgcgttacc tctccgaagt ctacaagacg ctcgttcaaa ccgtgccgga gctcgcgcgc
      241 acccccgagc tcgacgcggc gaccgaatac ctgggcacca tcgtgcgcgg cgtcgattcg
      301 agcctgctcg acgaatggca gcgcctgcgt caccccgagc gtctgctcga cgtgaacgcc
      361 gccggcttcg agcccgaacc ggatgccgac gacatcacgc gcgatcgccg cgtcttcacc
      421 gtgctcgtgc gaaacctgat gttctcgctc gtgcgctcgc tcgcgacgcg cgactacgag
      481 tcgttcctcg acgccgtcga atacggcaac gccgaatacg cgcagctcga cgtggaacgc
      541 gccctgcgcc cgctgttcga ctccggcgtc agcatcgacc tcgatgcgaa cgcgcgcagc
      601 ccacaaaaca cgacgttatc cgagcgcgac gacgacgcgt gggacgtgaa tcaggcgctg
      661 ctcatcgcgg gtgaagtgag cgaatacgcg atccgcggcc gcatcgatct cgcgcgttcg
      721 cgccgcgaac gccgcgcggt gttcttgctc gatcacgtgg gggcgtgagc tcagatcctg
      781 acgagcgccg cggatgggtc gagccggacg agatcgtgaa catctcgtcg aacgcggcgc
      841 agatgccctt cggtccgttc gcgcattact gcgctggcaa ggcggtgctc gacatgtatt
      901 cgcgcgcgct cgcgctagat ctcgggccgc agggcattcg cgtgaacgtc gtgtcaccgg
      961 ggccggtgat cacgccgggc ggcgacgagg cgcgacaggc gttcagcgac gcgacgggcg
     1021 cgccggccga cgtattcgcc cagtcagtgc cgctcggtcg cctcgggtcc ccggacgacg
     1081 tggcggaggt cgtcgggctg ctcgtgtcgg accgcgcgaa ctggatgacg ggcgcgaaca
     1141 tgctcgtcga cggcggcatg acggcgcgct gagatcgtcc ggccggtgcc gccgtttttc
     1201 tcggcgattc gcgtcgagcc ggcggcgtga agaggtaccg cgttcggcat ggccgggcga
     1261 aacgtttcgt cgccggtgag gagcttggcg aagcttcctc aggattttca acaagaagtc
     1321 ggctggacgt cacaaggacc tcgctgacgt agaggagctc gagcgcctga aagacagcta
     1381 attccggcat ctcgctgtag ttgcgcgggg gcgattcgac cgatgtacca cgaggttttc
     1441 tcggcaattc gcgtagagct cgcggcgtga gggcgcatga acgggagcga gcagctgata
     1501 caatccaggg aacgccgagc gaacgtccgc ctcatcgaac accaccaggc acatcgtggt
     1561 gagtcttcga cggttcgccg ttcggcgtag ccgggcgaga cgtttcgttg ccggtgagga
     1621 gctttaccgg cccgaccgct ttcacatcgt ggtgcagcga gggctgcgcg ggggcgattc
     1681 gaccgatgta cgacgaggtt tcttgcccgg gagggcttcg actacagttc gtccgacact
     1741 tcgtcgctgc gtggaccaag gtgacgaatc tcgaccgctt cgatgtcgtt gcctgatcgc
     1801 gaagtcgttc ttcgcgtctt gcgcgagctg cacgaagcag agcggtgacg gcgtcttgac
     1861 tcggcacgcc cgaattcgtg ctcccgcgtc accattgtca tgcgcattca cgtccttccg
     1921 ccgcacggcg gcgcgtgaaa gggttggtac tcgaagcgag cgagcgagcg cagcggcgcg
     1981 gggtcgcaaa ggagtcgatc agatgggatg gcgcgagcgg ttggattgga cgatggaggc
     2041 ggcggacggc ttgaaaccgg tggggctcgt gcatcaggtg ctgggcgacg ggcggctcga
     2101 cggacgccag atcgacctgc cccaggggcg cgtcgtgaac ttcggaaatt gctcgtacct
     2161 cgggctcgag accgacgagc ggctgaagcg cggggcgtgc gaggccgtcg agcgatttgg
     2221 cgtcgtcttc tcctcgtcac gggcctacgc ttcgctcccg ctgtacgagg agctcgaagc
     2281 gctcctgtcg gagctcggtg gcggctggcc ggtagtcgtg gcgccgagca cgggcgtcgt
     2341 gcaccaggcg gccctgcccg tgctggtcga agacggggac gccgtgtgct tcgacgtcat
     2401 ggcgcactcg accttgcacg tgacgctgcc gctgctcgcc gcccgcggaa tccattgtga
     2461 gcccgtgccg cacgatcgca tcgacgtgct cgagcgccgc gcgcgccgcc tggccgagaa
     2521 gcaccggcgt gtcttctatc tgtgcgacgg cgtctacagc atgcacgggg acgtcgcgaa
     2581 cctcgacgcg ctgctcgacg tgctggaccg cacgccggcg ctctttgcgt acgtcgacga
     2641 cgcacacggg gtcggctggg ccggtcggca cggcgccggg gtcgtgctcg gggagcggcg
     2701 cctacatccg cagatggccg tggcgctgag cttgaacaag gcgttcgccg ccggcggggg
     2761 ctgcttgatg ctgcccgagg cggagctcgc gcgccgcgtc ttcacgtgcg gcggcccgct
     2821 gatcttctcg gggccgctgc cacctgcgca gctcggtgcc gccatcgctt cggcgcgcat
     2881 ccacctctcg cccgagctcg ccgtgctgca acgagagctc aggagtcgca tcgagctctt
     2941 cgaccttttg gccgcgacgg cggggatcga atgcgtggtg cgtacccgct cgcccattcg
     3001 cttcatcgag ctcggctcga acgagcgaac gagcgctgtg gcggccgcgc tgcttgccgc
     3061 gggctttttc gtgaacgttt ccgtctttcc cgccgtgtcg cgtggtcacg ctggcgtgcg
     3121 gctgatgctc accgtgaacc agacgctcga ggacgtcggg cgcctcgtga ccgagctcag
     3181 ccaggccgta cgtcgc
//
LOCUS       DATIML010000885         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_187848, whole genome shotgun sequence.
ACCESSION   DATIML010000885 DATIML010000000
VERSION     DATIML010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187848"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1070
                     /locus_tag="VLJ38_15355"
     CDS             <1..1070
                     /locus_tag="VLJ38_15355"
                     /inference="COORDINATES: protein motif:HMM:NF045433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system protein GspK"
                     /protein_id="HSU40954.1"
                     /translation="NGKNLGLDGAGFDIEIIDEDSKIDLNAPARGDSFSKARLGSQLA
                     GLMAGPQYDPLFSGRDADGQHSDRQAICGAIIDFIDPDQDADQSFCDPTSMTAQQTGA
                     EDGFYQSLPRPYERKNAALDSFEELHRVRGMSEDFWSTFIDPDPDDPSKRTVTVWGTG
                     TVNVNTANPQTLYALVCSNVDPTNTPMCHDPNEAAKFLGAFAMVRAFTRGAPLFGSPD
                     LFITSMQGKGLFGPVLAALGMMPVVFKSNDVLKKQMGTESKVFSIYATGRVKSGSRVT
                     HSKIHAVVDFRVAPAPGVNMAALQSMNAAQNALTNSAASLATAATTAGGASSSQTAAN
                     MAMQAVLKPSPGGSIIYFRVE"
     gene            1071..>2462
                     /gene="pilM"
                     /locus_tag="VLJ38_15360"
     CDS             1071..>2462
                     /gene="pilM"
                     /locus_tag="VLJ38_15360"
                     /inference="COORDINATES: protein motif:HMM:NF022554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HSU40955.1"
                     /translation="MGRFLGIDIGSRVVTAVVLDVGFRKLALSALADTVIADHPSLEA
                     AVRAAAFALTPQIEAVGVALEGDRTFTHRLTMPVTALKQIDEILQFELEAAVPVEIDE
                     LVWGHRLLRRKDNKEPLVVLATAARTEEVRQRIELLRGAIGREPDRVGHGALSLANLT
                     TLSHELRAPEPIAIVDLGGRTTEVTVLVAGEALFMRTLSRGTDGLPDAAPALAAELRQ
                     TLLAWVAERGEAVTALYLVGDGAQSPGAEAYFGYELGVPVRPLPALSMLGILPEQLPV
                     LPRYAKAIGLALGAAGRGHDVDLRRGPLAFQRGFSFLKEKAPLLTGLVGSVAVSFLFA
                     MWSELRALGRDLDAATAELERTTQSAFEKGTTDPAEATELLEQTKAKAESDPMPRLDA
                     FDVMVDISKAIPMSVTHDIEELDMQRGHVRMQAVVNTTGDASLVRDKIAETPCVNDAK
                     IAKVSQVVNGSKQK"
BASE COUNT          426 a          853 c          791 g          392 t
ORIGIN      
        1 ccaacggcaa gaacctcggc ctcgacggcg ccggcttcga catcgaaatc atcgacgaag
       61 actcgaagat cgacctgaac gcgcccgcgc ggggcgattc gttctccaag gcgcgcttgg
      121 gttcgcagct cgcgggcctg atggcgggcc cgcagtacga tcccctgttt tcgggccggg
      181 acgccgacgg ccaacactcc gaccgccagg cgatttgcgg cgccatcatc gacttcatcg
      241 atcccgacca ggacgccgat cagtcatttt gcgacccgac ctcgatgacg gcgcagcaga
      301 ccggcgccga agacggattc taccagtcgc tgccgcgccc ctacgagcgc aagaacgccg
      361 cgctcgacag cttcgaggag ctccatcgcg tgcgcggcat gagtgaagac ttctggtcga
      421 ccttcatcga ccccgacccg gacgacccgt ccaagcgcac ggtgaccgtt tggggaacgg
      481 gtaccgtcaa cgtcaacacg gcgaacccgc aaacgctcta cgcgctcgtc tgctcgaacg
      541 tcgacccgac gaacacgccc atgtgtcacg acccgaacga agccgcgaaa ttcctcggtg
      601 ccttcgcgat ggtgcgcgcc ttcacgcgcg gcgcgccgct cttcggctcg cccgatctgt
      661 tcatcacctc catgcagggc aagggtctgt tcggtccggt gctcgcggcg ctcgggatga
      721 tgccggtcgt gttcaagtcg aacgacgtgc tcaaaaagca gatgggcacc gagagcaagg
      781 tgttcagcat ctacgcgacc gggcgcgtga agtcgggctc gcgcgtcacg cactcgaaaa
      841 tccacgccgt cgtcgatttc cgcgtcgcgc ctgcgccggg tgtcaacatg gccgccctgc
      901 aaagcatgaa cgcggcacag aatgccctca cgaattcggc ggcatcgctg gcgaccgcgg
      961 cgaccacggc cggcggcgct tcgtcgagcc agacggccgc caacatggcg atgcaagcag
     1021 tgctcaagcc ctcgccgggc ggtagtatca tttatttcag ggttgagtga atgggacgct
     1081 ttctcggtat cgatatcggc tcccgcgtcg tcaccgcggt ggtgctggac gttggctttc
     1141 gcaagctcgc gctgagcgcg ctcgctgaca cggtgatcgc cgatcatccg tcgctcgagg
     1201 cggccgtccg cgccgccgcc ttcgcgctca cgccgcagat cgaagcggtg ggcgtcgcgc
     1261 tcgagggcga tcgcacgttc acgcaccggc tcacgatgcc ggtgacggcg ctcaagcaaa
     1321 tcgacgagat cctgcagttc gagctcgaag cagccgtccc cgtcgagatc gacgagctcg
     1381 tttggggaca ccggctcctg cggcgcaagg acaacaagga gccgctcgtc gtgctcgcga
     1441 ccgcggcgcg caccgaagaa gtgcgccagc gcatcgagct gctgcgcggc gcgatcggtc
     1501 gtgaacccga tcgcgtcggc cacggcgcgc tgtcgctcgc gaatctgacg acgctgtccc
     1561 acgagctcag agcgcccgag ccgatcgcga tcgtcgatct cggcggccgc accaccgagg
     1621 tcaccgtgct cgtcgcgggg gaagcgctgt tcatgcgcac gctctcgcgc ggtaccgacg
     1681 gcttgcccga cgcggcgccc gcgctcgccg ccgagctccg ccagacgcta ctcgcgtggg
     1741 tggccgagcg cggcgaggcg gtgacggcgc tctatctcgt gggtgacggc gcgcagtcgc
     1801 cgggcgcgga agcatatttc gggtatgagc tcggcgtccc cgtacgcccg ctgccggctc
     1861 tttcgatgct cggcattttg cccgagcagc tcccggtctt gccgcgttac gcgaaggcca
     1921 tcgggctcgc gctcggcgcc gccgggcgcg gccacgacgt agacctccgc cgaggcccgc
     1981 tcgcattcca gcgcggcttc tcgttcctga aggaaaaggc gccgctcttg acggggctcg
     2041 tcggctccgt ggcggtaagc ttcctgtttg cgatgtggtc cgagctgcgc gcgctcggtc
     2101 gggacctgga cgccgcgacc gccgagctcg agcgcacgac gcagagcgca ttcgagaagg
     2161 gcacgaccga tccggccgaa gcgaccgagc tcctggaaca gaccaaggcc aaagccgaaa
     2221 gtgatccgat gcctcgcctg gacgccttcg acgtcatggt cgacatttcg aaggccatcc
     2281 cgatgagcgt cacgcacgat atcgaggagc tcgatatgca gcgcggccac gtccgcatgc
     2341 aagccgtcgt gaacacgacg ggcgacgcgt cgctcgtgcg cgacaagatc gccgaaaccc
     2401 cgtgcgtcaa cgacgccaaa atcgccaaag tttcccaagt cgtgaacggc tccaagcaaa
     2461 ag
//
LOCUS       DATIML010000886         2676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_477953, whole genome shotgun sequence.
ACCESSION   DATIML010000886 DATIML010000000
VERSION     DATIML010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477953"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2663)
                     /locus_tag="VLJ38_15365"
     CDS             complement(<1..2663)
                     /locus_tag="VLJ38_15365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40956.1"
                     /translation="MSEGTKKLVVVEQSGVPSVELAPGEHTLVGAFEWDSLPDSLQVP
                     PETGIVSLLLAGALVAEPRRDHAGRLFLQKTSVEAEGERLEIVVHRRVIDDVPLLLTT
                     RVVLNVSGKSREVVLGKALPPGFTPLSITSELPARIEADTRLRVQARPGTWTIEVVAR
                     SEGPVTELARPAPDGPWRDGEEVWVFEAKSALRSTSVEGVRAIDPQQTSLPDAWKSLP
                     SYAMALGDKMRLVEKRRGDVEPEPDRLSLARVLWLDFDGGGYTANDSITGTVHRATRL
                     EMQPPTVLGRVAIEGRDQFITHLDKDPHKSGVELRQGPLSVSADSRINGAASDIPAVG
                     YDHDFHEVSATLHIPPGYRLLHASGADEVPGTWVRHWTLLELFLVLVLSLAFAKLFGR
                     AWGALACLTFTLVFPETDAARWLWAAALAFEALARVIPAGKARVACAVLRLGALLVLL
                     LNTLPFVVEHVREGIYPALADNDAGGGEVTQDSELLVAKTEEKPSLRPEAERPAPKTP
                     SGAPSPPSGTDAAVARGAGSLAPLSALSSPSRADYKQFNQAYDPNAMVQTGPGLPEWR
                     WSTTSVTFSGPVERSQRLHFYYLSPPINLLLALVRAALLTLLFARLLPFGTRRLPGFG
                     RPAAALAGLFLVLLPAPAARAQIPDDAVLNQYRDRLLAKPNCAPTCASSSRMLLDVHA
                     NVLRARLAIEVSATSAVPLPGDAAQWLPERVLVDGNPAQGLLRSDDGQLWLRLEPGVH
                     DVSVEGALPSRESLQIALPLKPHHVAVSVDGWSLEGVHEDGLADDHLQLTRTISKGGK
                     SAALAAGTLPPFVRVERTLLIGLNWQVSTRVVRVTPAGTAVVLEVPLLPGESVTTPDV
                     RSAAGKVLVNMPPDATEANWQSVLEQRSPVTL"
BASE COUNT          469 a          887 c          909 g          411 t
ORIGIN      
        1 agcgtgaccg gcgaacgctg ctcgagcacc gactgccagt tcgcttcggt cgcgtcgggt
       61 ggcatgttca cgagcacctt gccggccgcg ctgcgaacgt caggggtcgt gaccgactca
      121 cccggcagca gcggcacttc gagcacgacc gcggtgcccg ccggcgttac ccgcacgacg
      181 cgcgtgctca cctgccagtt gagtccgatc aataacgtgc gttcgacacg tacgaacggc
      241 ggcaaggtgc cggccgcgag tgccgcactc ttgccccctt tgctgatcgt gcgcgtgagc
      301 tgcaaatggt cgtcggccaa gccgtcttcg tgcacgccct cgagcgacca accgtcaacg
      361 cttaccgcga cgtgatgcgg cttgagcggc agggcgattt gcagcgattc gcggctcggg
      421 agcgctcctt cgacgctcac gtcgtggacg cccggttcga gccgaagcca gagttgaccg
      481 tcgtccgacc ggagcaggcc ttgagccgga ttgccgtcta ccaacacgcg ctcgggcaac
      541 cactgcgccg cgtcgcccgg gagcggcacg gcgctggtgg cgctcacctc gatcgcaagt
      601 cgcgcgcgca gtacgttggc gtgaacgtcg agcagcatgc gcgagctcga cgcgcaggtc
      661 ggcgcgcaat tcggcttggc gagcagccga tctcgatact gattgagcac ggcgtcgtcc
      721 ggaatttgcg cgcgcgccgc gggcgccggc aataaaacca gaaacaaccc ggccagtgcc
      781 gcggcgggtc gtccaaagcc tggcagccgt cgggtaccga agggaagcag gcgagcaaag
      841 agcaaagtca gtagcgcggc acgcaccaag gcgagcagta gattgatggg cggggagagg
      901 taatagaaat gcaggcgctg cgagcgctcg accggtccgc tgaaggtcac gctcgtcgtc
      961 gaccaacgcc actcgggcag gccgggtccg gtttggacca tcgcgttcgg gtcgtacgct
     1021 tggttgaact gcttgtagtc cgcgcgcgac ggagacgaca acgcgctcag cggcgcgaga
     1081 ctcccggcgc cacgcgcaac ggcggcgtca gtgccgctcg gtgggctcgg agcacccgaa
     1141 ggcgtcttcg gagccggccg ttccgcttca ggccggagcg atggtttctc ttcggtcttg
     1201 gcgaccaaaa gctcgctatc ctgggtcact tcaccgccgc ccgcgtcgtt gtccgcgagc
     1261 gccggataaa tgccctcgcg cacgtgctcg acgacgaatg gcaacgtatt gagcagcagg
     1321 accaagagcg cacccaggcg caagacggcg cacgcgacgc gcgctttgcc ggccgggatc
     1381 acgcgcgcca aggcttcgaa cgccagcgcc gcggcccaga gccagcgtgc cgcgtcggtt
     1441 tccgggaaca cgagcgtgaa cgtcaaacag gcgagcgcgc cccaagcgcg gccgaacaac
     1501 ttggcgaaag cgagcgagag cacgagcacc aggaagagct cgagcaaggt ccagtggcgg
     1561 acccaggtac cgggcacctc atcggcaccg gacgcatgga gcagccgata gccaggcgga
     1621 atgtgcagcg tggccgagac ttcgtgaaaa tcgtgatcgt agccgacggc ggggatgtcg
     1681 ctcgcagcgc cgttgatgcg actgtcagcc gagacggaga gcggcccttg ccgcagctcg
     1741 acgcccgatt tgtggggatc tttgtcgagg tgagtgatga actgatccct gccctcgatg
     1801 gcgacgcgac cgagcaccgt cggcggttgc atctcgagtc gcgtcgcgcg atgcaccgtg
     1861 ccggtgatgc tgtcgttcgc ggtatagccc ccgccgtcga aatccagcca caagacgcgc
     1921 gccagtgaca agcgatcggg ctctggctcg acgtctccgc ggcgcttctc gaccagccgc
     1981 atcttgtcac cgagggccat cgcgtagctc ggcagcgatt tccacgcgtc gggcagcgac
     2041 gtttgttgcg gatcgatcgc gcgcacgcct tccaccgagg tcgagcggag cgcactcttg
     2101 gcctcgaaga cccagacttc ttcgccgtcg cgccacgggc cgtccggggc gggacgcgcg
     2161 agttccgtca cggggccttc actgcgagcg acgacttcga tggtccaagt gccggggcga
     2221 gcttgcacgc gcaggcgcgt gtcggcttcg atgcgcgccg gcaattcgct cgtgatcgac
     2281 agaggcgtaa agccgggagg cagcgcctta cccagcacga cttcacgact tttgccggag
     2341 acgttgagca cgacgcgcgt cgtgagcaag agcgggacgt cgtctatgac tcggcgatgg
     2401 accacgattt cgagccgctc accctcggct tcgacgctcg tcttctgcag aaagagccgc
     2461 cccgcgtggt cgcgacgggg ctcggcgacg agtgccccgg cgagcagcaa cgagacgata
     2521 ccggtctcgg ggggcacttg cagcgagtcc ggcagcgaat cccactcgaa cgcgccgacg
     2581 agggtgtgct cgcccggggc gagctcgacg ctcggcacgc cagactgctc gaccacgacc
     2641 agcttcttcg tgccctcgct cacgtccaag ggccag
//
LOCUS       DATIML010000887         1732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1056542, whole genome shotgun sequence.
ACCESSION   DATIML010000887 DATIML010000000
VERSION     DATIML010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1056542"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..>1732)
                     /locus_tag="VLJ38_15370"
     CDS             complement(119..>1732)
                     /locus_tag="VLJ38_15370"
                     /inference="COORDINATES: protein motif:HMM:NF012400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097159 - organic cyclic compound binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b5-like heme/steroid binding
                     domain-containing protein"
                     /protein_id="HSU40957.1"
                     /translation="AELLADPSVARELLELVRAQEDGGQGASVYVCGRSGFASTVVDA
                     LTRAFERTLEAEHAPPHSGAVHLLRQLSGEGRLVFELHTDARPIADESRWLSLSEVAQ
                     RNNPKAGYWVILEQSVYDLTEFAELHPGGRTIVRAYAGIDASHAYDRAHGRQPDVDAM
                     REMYKIGRIRPLSFEAFTTKIKGPSGTTTLSCRAAYQAWVRALHLVVEMQNAHTVDLA
                     LQSSVTSPLEMPRHGSDRFKLSRAAETHVRFLRNCLKPLRAETLPALWSITRGVFAPE
                     ASEGWMQERLAHIARDQRSRYVKATSQDLVDNVQEWMEREELMLPLLATAREEDGRLL
                     EELKRVLVHGVQIFEEFETKTRTLGGDALIATCRRALTAVQEYYERLDAQWRRLRGAP
                     QLHRGRTSSRWPAANVRRLHESEFWLLDDFPEQRIAVLHRTPLPAVSLPALAADNDAL
                     IAKLGEQHRAYGIVVDTREAPLRNDKAFEETMAKFRLELTTHFERTAVLLESALGELQ
                     VTRLERDEGRTTFVTRSVSAAFRFAAGGR"
BASE COUNT          258 a          566 c          610 g          298 t
ORIGIN      
        1 ggcggagtgt actccgggtt cgcgcggcgc cagggcgagg cgtactgccc cgccgaacgg
       61 ctcccctttt ctcacggcag agcgcgatgc tcgctcgagc cggcctcggc gaccgctctc
      121 agcgaccgcc cgcggcgaag cggaacgcgg cgctcacgct acgtgtgacg aacgtggttc
      181 gtccttcgtc ccgctcgagc cgggtgactt ggagctcgcc gagggcgctc tcgagtagta
      241 cggccgtgcg ctcgaaatgc gtcgtcagct cgagccgaaa tttcgccatg gtctcctcga
      301 aagctttgtc gttgcggagc ggtgcctcac gcgtgtcgac gacgatgccg taggcgcgat
      361 gctgctcgcc gagcttggcg atgagcgcgt cattgtcggc ggcgagcgcc gggagtgaca
      421 cggcgggcag cggtgttcga tggagcacgg cgatgcgctg ctcggggaag tcgtcgagca
      481 gccaaaactc gctctcgtgc aggcggcgga cgttggcggc gggccagcgc gaggacgtgc
      541 ggccgcgatg aagctggggc gctccccgca ggcgccgcca ctgagcgtcg aggcgctcgt
      601 agtactcctg aacggccgtc agcgctcggc ggcaggtcgc gatcagcgcg tctccgccga
      661 gcgtgcgcgt tttagtttcg aattcttcga agatctgcac gccgtgcacg agcacgcgct
      721 tgagctcttc gagcagccga ccgtcttcct cgcgcgcggt ggcgagcaac gggagcatga
      781 gctcctcgcg ttccatccac tcttggacgt tgtcgaccag atcttgcgac gtcgccttca
      841 cgtacctgct gcgctggtca cgagcgatgt gggccaagcg ctcctgcatc cagccctcgc
      901 tcgcctccgg agcgaacacc ccgcgcgtga tcgaccagag cgccggcagc gtctcggcgc
      961 gcagcggttt caggcagttg cgcagaaaac gaacgtgcgt ctcggcggcg cgcgagagct
     1021 tgaaacgatc gctgccgtgc cgaggcattt cgagggggct cgtcacggag ctctgcagcg
     1081 cgaggtccac cgtgtgcgcg ttttgcattt cgacgaccag gtgcagcgcc cgcacccacg
     1141 cttgatacgc ggcgcggcag ctgagggtgg tcgtaccgct cgggcctttg attttcgtcg
     1201 taaaggcttc gaatgaaagc ggtcggatcc ggccgatctt gtacatctcg cgcatggcat
     1261 cgacgtcggg ctgccggccg tgcgcgcgat cgtaagcgtg gctcgcgtcg atgccggcgt
     1321 aggcgcgcac gatcgtgcga ccgcccgggt ggagctcggc gaactccgtc aaatcgtaca
     1381 cggattgctc gaggatgacc cagtagccgg ccttgggatt gttgcgttgc gcgacctccg
     1441 acagcgagag ccagcgcgat tcgtcggcga tgggccgggc gtcggtgtga agctcgaaga
     1501 cgagccggcc ttcgccggag agctgccgga gcaagtgcac ggcgcccgag tgcggcggtg
     1561 cgtgctcggc ttcgagcgtt cgctcgaacg cgcgcgtgag cgcgtcgacc accgtggacg
     1621 cgaagccact tcgaccacag acgtagacgc tcgccccctg accgccgtct tcctgcgcgc
     1681 gaacgagctc gaggagctcg cgcgcgacgc tcgggtcggc gagcagctcc gc
//
LOCUS       DATIML010000888         3629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3079401, whole genome shotgun sequence.
ACCESSION   DATIML010000888 DATIML010000000
VERSION     DATIML010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3629
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3079401"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VLJ38_15375"
     CDS             complement(<1..278)
                     /locus_tag="VLJ38_15375"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HSU40958.1"
                     /translation="MSHLPTLLAVGSRLTRSTAEAEDLVQDTLLKALRAREHFTPGSN
                     MRAWLLRILTNTFINRYRRGGLERSVLDGPDADPLADGWISASTMESMR"
     gene            complement(365..1000)
                     /locus_tag="VLJ38_15380"
     CDS             complement(365..1000)
                     /locus_tag="VLJ38_15380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis regulator
                     DNA-binding domain-containing protein"
                     /protein_id="HSU40959.1"
                     /translation="MNTETVSEANGSVPRRIIKRYSNRKLYDTQGSTYVTLLQIAQMI
                     REGEEVQIIDNASKEDKTDVTLALIISEELRTKPRAVPLSTLKALIRHGGERILSQLR
                     GGTIGRLMPNGAEGDPATEPINEDAPPSSVPPFNLEDDLSDSPRNGIRATLEHWQTQI
                     DERIRAVLPNFAAFRELEQEVKRISARLDAIEKRLGQAGGSEPPQDPGPSA"
     gene            1256..3007
                     /locus_tag="VLJ38_15385"
     CDS             1256..3007
                     /locus_tag="VLJ38_15385"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSU40960.1"
                     /translation="MASTRLREGDLLELRGDAFPEGRAAEVTLRGEVSRAGEPRARHF
                     ELSLPGRSVSTHAVSVDVTRPVERAFSGSTSPSHATFHGSIEVSFAPRVARTPPVTGV
                     LPDVTLDFLPAEGDSATLEARREEGAKFAEFIGVLLADDRAVPTVSGVMPGSAAERAG
                     VVLGDRLRELAGVHVLGVDDLVPPPRARSAELVVERDDRADGRRLVVDVTGFRPLLPR
                     DLGAGAALIASALALLFLLASPFGRALSFIEHRLLERLRSRDTALKPPLAGARRPPSR
                     AARLVQLLPMGIGSYAVFVVTNAVVAATALGVPIVAREIDLPILVVLSFTALALASFV
                     FGAPGERGIWARTRRALLVLVQALPALGALACLGLAVGSYGPDALALAQGAAPWDWLA
                     FKSPVLLAAASLLVLSLVPEVSRGRSIALALAAEKGRAERRQAAAALMGQAQLLIVSG
                     VTALAFFGGARLPGTSSSLAPSLGLALASVLWLLLKAWAIAGSVTALRWVLGRLDIDE
                     VRGLTLRAGVPLAAALVVLAALAREKPFERWLAASDRGLGWACLAGWLTLAVLVARRV
                     AAGRALADGERGPNPWL"
     gene            complement(3267..>3629)
                     /locus_tag="VLJ38_15390"
     CDS             complement(3267..>3629)
                     /locus_tag="VLJ38_15390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40961.1"
                     /translation="QGGGAVTVFKDTDASWANGRVVGGSNNWVTSGSTSVPSEWSGTR
                     QGTNPGFNNVGGRDLGLTSSSPLRDVGNGAATSPSGHAFPRPETSARFEPPRHASQAV
                     DSATKRVVVGAIDLGAYE"
BASE COUNT          440 a         1197 c         1332 g          660 t
ORIGIN      
        1 cgcatcgact ccatggtcga ggcgctgatc cacccatccg ccagcggatc ggcatccgga
       61 ccgtccagca cgctgcgctc gagaccgccg cggcgatagc ggttgatgaa cgtgttcgtg
      121 agaatgcgca gcagccaagc ccgcatgttg ctgccgggcg tgaaatgctc gcgggcgcgc
      181 agggccttga gcagggtgtc ctgcacgagg tcctccgctt ccgccgtgct gcgcgtcagg
      241 cgcgagccga cggccagcag ggtcgggagg tgagacattg cctcacgctc gaattcgctg
      301 ggccgtcgtc tcatcgtggt catctgaaag gcaaacctcg gctctcgcgc ggatattccc
      361 cggactaggc gctcggtcca gggtcctgcg ggggttccga cccgccggcc tgacccaggc
      421 gcttctcaat cgcgtccagg cgggccgaga tgcgcttgac ctcctgctcg agctcgcgga
      481 aggccgcgaa attcggcagg actgcgcgga tacgttcgtc gatttgggtt tgccaatgct
      541 cgagggtcgc gcggatgccg ttgcgggggc tgtcggacaa atcgtcctcc aggttgaagg
      601 ggggaacgct cgaaggcgga gcgtcctcgt tgattggctc ggtggccgga tcgccttcgg
      661 ccccgttcgg catgagccgg ccgatcgttc cgccgcggag ctggctcagg atgcgctccc
      721 cgccgtggcg aatgagggct ttgagcgtgc tcagcggaac ggctcgcggt ttggtgcgga
      781 gctcttccga gatgatgagc gcgagcgtta cgtcggtctt gtcctctttg ctcgcgttgt
      841 cgatgatttg tacttcttca ccctcgcgga tcatctgtgc gatctggagg agcgtcacgt
      901 aggtgctgcc ctgcgtgtcg tagagcttgc ggttcgagta ccgcttgatg atgcggcgcg
      961 ggacggaccc gttggcctcg gagacggttt cggtgttcat ggggaaatgg ggtgggctag
     1021 aggctcggaa cgactattga atcgtgtccg agcgggcagg tgtgaggcgc cgctccctca
     1081 agcatgatgc aaagcgtcaa gggggcaagg cgcgcggtga gcaggaattt ttccggaatt
     1141 ccggcaggtt gctacgctgt gggccagcgt gggcaaagcc ggttctctaa ctcttatcgt
     1201 ttttggctgg gcgtgccagt cggccggcgg gcctgccctc gtgaacgttg acggcgtggc
     1261 ttctacgcgc ctgcgcgagg gggatctgct cgagctgcgc ggcgatgcat tccccgaggg
     1321 gcgcgcagcc gaagtcacgc tgcgcggcga ggtgagtcgg gcgggtgagc cgcgcgcccg
     1381 ccatttcgaa ttgtctctgc cgggacgcag cgtgtcgacg cacgccgtgt cggtcgacgt
     1441 gacccgcccc gtcgagcgcg cgttcagcgg atctacgtcg ccgtcgcacg cgacgtttca
     1501 cggctcgatc gaagtttcgt tcgcgccgcg cgtcgcgcgc acgccgcccg tgaccggcgt
     1561 cttgccggac gtgacgctcg acttccttcc cgccgaaggc gacagcgcga ccttggaggc
     1621 tcgtcgcgag gaaggcgcga agttcgcgga gttcatcggg gtgctgctcg ccgacgatcg
     1681 cgccgtgccg accgtgtccg gcgtgatgcc gggcagtgcc gccgagcggg ctggcgtcgt
     1741 gctcggcgac cggctgcgtg agctcgccgg cgtgcacgtg ctcggcgtgg acgatctggt
     1801 gccgccgccg cgcgcgcgca gcgcggagct cgtggtcgag cgcgacgacc gcgcggacgg
     1861 gcggcgactg gtcgtggacg tgacaggctt ccggccgctg ctgccgcgcg atctcggcgc
     1921 cggagccgcg ctgatcgcga gcgcgctcgc gctgctcttc ttgctggcat cgccgttcgg
     1981 ccgcgcgctg agcttcatcg agcatcgctt gctcgagcgc ttgcgcagcc gggataccgc
     2041 cttgaagccg ccgctcgcgg gcgcgcggcg gccgccgtcg cgcgcagccc ggctcgtgca
     2101 gttgctcccg atgggcatcg gcagctatgc cgttttcgtc gtcacgaacg cggtcgtcgc
     2161 ggcgacggcg ctcggcgtgc ccatcgtcgc gcgcgaaatc gacctgccga ttctggtcgt
     2221 gctctcgttc acggcgctcg cgctcgcgag cttcgtcttc ggcgcgcctg gtgaacgcgg
     2281 gatttgggca cgtacgcgcc gcgcgctact cgtgctcgtg caagcactgc ccgcgctcgg
     2341 cgcgctcgcg tgtctcggtc tcgccgtcgg tagttacggt ccggacgcgc tcgcgctggc
     2401 gcagggcgcg gcgccctggg actggctcgc cttcaagagt ccagtcttgc tggcggcggc
     2461 ttcgctgctc gtgctctcgc tcgtgcccga ggtgtcgcgt ggccgctcca tcgcgctcgc
     2521 gcttgccgcc gaaaaaggtc gggccgagcg ccgccaagcc gcggcggcgc tgatgggcca
     2581 agcgcagctc ttgatcgtga gcggcgtgac ggcgctcgca ttcttcggcg gcgctcgcct
     2641 gccgggcacg agctcctcgc tcgcgccgtc gctcgggctc gcgctcgctt ccgtgttgtg
     2701 gctgctgctg aaggcgtggg ccatcgccgg gtcggtcacg gcgctgcgct gggtgctcgg
     2761 gcggctcgac atcgacgagg tacgcgggct cacgttgcgc gcgggcgtgc cgctcgccgc
     2821 cgcgctcgtc gttttggcgg cactcgcgcg ggagaagccg ttcgagcgct ggctcgccgc
     2881 gagcgatcgc ggcctcggtt gggcgtgcct cgccgggtgg ctgacgctcg ccgtgctcgt
     2941 cgcgcgtcgc gtggcagccg gtcgggcgct tgcggacggc gagcgcggtc cgaatccgtg
     3001 gttgtgattc gacgcaccac aggcgagcgc tcgcaattcc gttcaggcgc ggattgccgc
     3061 gtgcgccgaa ggtgctgcgc caggcttgcg ctgcccgcta ggctcgaacg acgcgaggag
     3121 cgcgggaacg attgcatgaa gcgcggccga gcctgcgggg cggcggcgcg ctcgattagc
     3181 cgaaatcgcc gcgccacact gttcacgcag ctgaacaatg ccgacgcgcg gcgccgcgag
     3241 cgacaccgcg gcctcgctcg cgtctcttac tcgtacgcgc cgagatcgat ggcgccgacg
     3301 acgacgcgtt tggttgccga gtcgaccgct tgcgaagcgt gccgtggcgg ttcgaagcgc
     3361 gcggacgtct cggggcgcgg gaacgcatgc cccgacggtg acgtcgcggc gccgttgccc
     3421 acgtcgcgca gcgggctcga cgacgtgagg ccgagatcgc ggccgccgac gttgttgaag
     3481 ccggggttcg tgccttgacg cgtgccgctc cattcgctgg gaaccgaggt cgagccgctc
     3541 gtgacccagt tgttgctgcc gccgacaacg cggccgttcg cccagctggc gtccgtgtcc
     3601 ttgaagacgg tcacggcgcc gccgccctg
//
LOCUS       DATIML010000889         3278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5103852, whole genome shotgun sequence.
ACCESSION   DATIML010000889 DATIML010000000
VERSION     DATIML010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3278
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5103852"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..694
                     /locus_tag="VLJ38_15395"
     CDS             <1..694
                     /locus_tag="VLJ38_15395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40962.1"
                     /translation="AVDEPTNVSGVVAIVPWERAGLGWITRLWATARLATLSHRELFA
                     SLPEGNARPAFEFALLSELVSAFGVALGVGGALALVPDFVHTALHDAVVRQVLLRVVA
                     WGVPGLAGLMILLHALHGLLVDRAAVAAGSKKRGRGLRFGLYACGWDLVTLPLGLLVV
                     ALTEGLSTTKRAAGLAISIPSQATRAYLTGVHALTPERAKKAAARANAQTGIGALVLL
                     ALVTLLLALVMR"
     gene            complement(707..1825)
                     /locus_tag="VLJ38_15400"
     CDS             complement(707..1825)
                     /locus_tag="VLJ38_15400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40963.1"
                     /translation="MKIRNPAALAVGLFVFGGARVAGADPLDPALERLVSSQTAACRT
                     SSGTYVPGAVSADGMAATCLPDNGAFARLVNQWGFALAPTAMHSARTTGYGGFDLSIE
                     ANYTSISGNKDYWKAGTQGEVDPNTGQPSNINRSPPSLLQNYSLKFRKGFGFGLELTG
                     IVGFVPQSSIVSGGADVRMSLLEGFRTGVGGVLPDVAVGAGVRTITGTSEFQLTTMGL
                     DGQISKPFAIAGQSVLTPWLGYQYLFIWGDSGLIDLTPATDAIQACNYSGAAVPGNPD
                     PSRVNASGEHVYDGGPVCRGGQAYDFNNNSVFEPVRLRRHRLLVGLNYRYEMVMVGAQ
                     FIMDLVPPANAQFKQSAKDYLAGEDKQYSFVLELGAVF"
     gene            1981..2511
                     /locus_tag="VLJ38_15405"
     CDS             1981..2511
                     /locus_tag="VLJ38_15405"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HSU40964.1"
                     /translation="MLEERLRATPRERPFHVVLVEPEIPPNTGNVARLCAATRSALHL
                     VGRLGFRIDEHAVRRAGLDYWHLVDLHTHATLDDALGAIALGRAEPPRRWFLSAHGAR
                     SYLDIAFEPGDVFVFGKESVGLPTELLAREPERTIGIPTLGAVRSHNLANAVAIVLYE
                     ALRQTGQLSGAALSAP"
     gene            complement(2530..3033)
                     /locus_tag="VLJ38_15410"
     CDS             complement(2530..3033)
                     /locus_tag="VLJ38_15410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40965.1"
                     /translation="MAASVPPPVEATAVLAVVAPAPRGIETPPPSVPDPHAAPDAHAA
                     PHGALAHTADVGHTSSTSSAPSTPAPSGSPGISSPGAAPEHVALGTLRLTADPGAVVS
                     VTGDQFSQTSATPVRALALAPGSYRIVFRSETYGAPVATEVTLAPGARRSVHADFRAA
                     EPSVIVR"
     gene            3032..>3278
                     /locus_tag="VLJ38_15415"
     CDS             3032..>3278
                     /locus_tag="VLJ38_15415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40966.1"
                     /translation="MPLLLPIPSSRDRADVAAGSGGTCVAGAPEGAVAPNSRNPSAAS
                     KASEVAPSTTVRQGDGRRVASGAVESRRVASTGGSGGG"
BASE COUNT          489 a         1113 c         1158 g          518 t
ORIGIN      
        1 cgccgtcgac gagccgacca acgtgtcggg cgtcgtcgcc atcgtgccgt gggaacgcgc
       61 agggctcggc tggatcacgc gcttgtgggc gacggcgcgc ctggcgaccc tgtcacaccg
      121 cgagctcttt gcttcgctgc cggagggcaa cgcgcggccc gctttcgaat tcgcgctgct
      181 ctcggagctc gtctccgcgt tcggcgtcgc gctcggtgtg ggcggcgcgc tcgcgctcgt
      241 gccggacttc gtccacacgg cgctgcacga cgcggtcgtg cgccaggtgc tgctccgcgt
      301 ggtcgcgtgg ggcgtgccgg gcctcgcggg actgatgatc cttttgcacg cactgcacgg
      361 tttgctcgtc gaccgcgcag ccgtcgccgc gggctcgaaa aagcgcggcc gcggcctgcg
      421 tttcgggctg tacgcgtgtg gctgggatct cgtgacgttg ccgctcggcc tgctggtcgt
      481 cgcgttgacg gaggggctgt cgacgacgaa gcgcgccgcg ggcctcgcca tttcgattcc
      541 gtcgcaagcc acgcgcgcgt acctgacggg agtccacgcg ctcacgcccg agcgcgcaaa
      601 gaaagccgcc gctcgcgcca acgcccagac gggaatcggg gcgctcgtgt tgctcgcgct
      661 ggtgacgctg ctgctcgcgc tcgtgatgcg ctgagccagc cgccgctcag aagaccgcgc
      721 cgagctccaa gacgaagcta tactgcttgt cttcgccggc gaggtaatcc ttcgccgatt
      781 gcttgaattg cgcgtttgcg ggcggcacga gatccatgat gaattgcgcc ccgaccatca
      841 ccatttcata acggtaattc aggcccacga gcagtcggtg ccggcgcagt cgcacgggct
      901 cgaacacgct gttgttgttg aaatcgtacg cttgcccgcc gcgacacacg gggccgccat
      961 cgtacacgtg ctcacccgaa gcgttcactc tactggggtc tgggttgccg ggaacggcgg
     1021 cgcccgagta gttgcacgcc tggatcgcgt ccgtagcagg cgtgagatcg atgagccccg
     1081 aatcacccca aataaataaa tactgatagc cgagccacgg cgtgagcacc gactggccgg
     1141 cgatcgcgaa cggcttcgag atctgaccgt cgaggcccat ggtggtgagt tggaactcgg
     1201 acgtgcccgt gatggtgcgc acacccgccc ccaccgccac gtccgggagc acgccgccga
     1261 ctccggtgcg aaagccttcg aggagcgaca tccgcacgtc ggcgccgccg gaaacgatgc
     1321 tcgattgcgg cacgaagccc acgattccgg tgagctccag cccgaagccg aagcccttgc
     1381 ggaacttgag cgagtaattc tggagcagcg aaggcgggga gcgattgatg ttcgacggct
     1441 gccccgtgtt ggggtcgacc tcgccttgcg tgcccgcctt ccaatagtcc ttgttgccgc
     1501 tgatgctcgt gtagttcgct tcaatcgaca aatcgaagcc gccgtagccg gtcgtgcgcg
     1561 ccgaatgcat ggccgtaggc gcgagcgcga agccccactg gttgacgagg cgcgcgaacg
     1621 cgccgttgtc gggcaaacac gtcgccgcca tgccgtcagc ggagacggcg ccggggacgt
     1681 acgtcccact cgaggtgcgg caagccgcgg tctgcgacga aaccaaccgc tcgagcgccg
     1741 gatcgagcgg gtcggcccct gccactcgcg ccccgccgaa tacgaagagc ccgacggcaa
     1801 gcgcggcagg attgcggatt ttcatgtgcg cggctccggc accgaccgga gaagctactt
     1861 gccggccggg atcgtcgtca agcaagcggc tagatccgag accgctcgcg tcgagctccg
     1921 ctccggagta gccgggtcgc tcggccgaga gtcgagtggt accgtcctat ccgagcgtcg
     1981 atgcttgaag agcgcttacg cgcgactcca cgcgagcggc cgttccacgt cgtgctggtc
     2041 gagccggaga tcccgccgaa cacgggcaac gtcgcgcgac tctgcgccgc aacccgttcg
     2101 gcgctgcacc tcgtcgggcg gctcggcttt cgcatcgacg agcacgctgt ccgtcgcgcc
     2161 ggtctcgatt attggcacct cgtcgatttg cacacgcacg cgacgctcga cgacgcgctc
     2221 ggcgcgatcg cgctcggtcg ggccgagccg ccgcggcgat ggttcttgag cgcgcacggc
     2281 gcgcggagtt acctcgatat cgcgttcgag cccggtgacg tcttcgtgtt cggcaaggag
     2341 agcgtcggcc tgccgaccga gctcctcgca cgtgagccgg agcgaaccat cggcattccg
     2401 acgctcggtg cggtgcgctc gcacaatctc gcgaacgccg tcgcgatcgt gctctacgag
     2461 gcgttgcgcc aaaccgggca gctttccggc gcggcgctca gcgcaccgtg acggacggct
     2521 cggcggcgct cagcgcacga tgaccgatgg ctccgcggcg cggaaatcgg cgtgtacgct
     2581 gcggcgcgcc ccgggcgcga gcgtcacttc cgtcgccacc ggcgcgccgt acgtctcgct
     2641 gcgaaagacg attcgatagc tgcccggcgc aagggcgagc gcgcgaacgg gcgtcgcgct
     2701 cgtctgcgaa aattggtcgc ccgtgacgct cacgaccgct ccgggatcgg cggtgaggcg
     2761 cagcgtgccg agcgcgacgt gctcgggtgc ggctccgggc gacgagatcc ccggactgcc
     2821 gcttggtgcg ggcgtgctcg gcgcgctcga cgtgctcgat gtgtgaccga catccgcggt
     2881 gtgcgccagg gcgccgtggg gcgccgcatg cgcgtcgggt gcggcgtgcg ggtcgggcac
     2941 actgggcggc ggcgtttcga tccctcgcgg cgcgggggcg acgacagcga gcacggcggt
     3001 cgcctccaca ggtggcggga cagacgcggc catgccgctt ttattgccaa ttccgtcgtc
     3061 ccgcgaccgc gccgacgtcg ctgccggtag cggcggcacg tgtgtcgccg gcgcgcccga
     3121 gggcgcggtg gcgccgaaca gccggaaccc gagcgcagcg agcaaggcga gcgaggtcgc
     3181 gccgagcacg accgtacgcc aaggcgacgg acggcgagtc gcaagcggcg cggtcgagag
     3241 ccggcgcgta gcgtccacgg gcggcagcgg cgggggaa
//
LOCUS       DATIML010000890         2334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2788422, whole genome shotgun sequence.
ACCESSION   DATIML010000890 DATIML010000000
VERSION     DATIML010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2788422"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VLJ38_15420"
     CDS             complement(<1..519)
                     /locus_tag="VLJ38_15420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40967.1"
                     /translation="MRRPLLGFAFVALACGEGNNAPGPPGSETQASLFVTLGPATPEI
                     FVAVVDDRPDATELRAAVARTFDGMDQQFLESSPSCHPPYDPAAFHPVDRAVVVVHPS
                     AAPEERYTTALDVPALSWRTDQRTDAEHAAWSAAVTAALEPKSGASGAFAALDSSEQV
                     ISLLRGLREPSND"
     gene            718..1107
                     /locus_tag="VLJ38_15425"
     CDS             718..1107
                     /locus_tag="VLJ38_15425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40968.1"
                     /translation="MNLRACLSIAIACLMLSQACSSGDDDASGGAGNGGSTAQGTGGA
                     SGTGGGASKCDSGCVATIAAACPNGPTDQDGCVNTCEALSTGSCAATYSAFQTCAVGK
                     PITCNSDGIPAVTACSDEQAAFIACLN"
     gene            complement(1157..1699)
                     /locus_tag="VLJ38_15430"
     CDS             complement(1157..1699)
                     /locus_tag="VLJ38_15430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40969.1"
                     /translation="MRALGISSCIFGLVLASACGGSQRPAELSPTSDATSKDAPAPSA
                     DEAKPASDAASSDDAKPVAATKADTTKKASDVPAPEFKENGSVLDAINAVPQGTPRLN
                     IEQEALGLPLNHPELYEPCKPGSAHFKAKVAIWDGKAVGLDLTTTPKNSKFAACVAER
                     IRSLTWPDKVKSLNIVEYTF"
     gene            complement(1748..>2334)
                     /locus_tag="VLJ38_15435"
     CDS             complement(1748..>2334)
                     /locus_tag="VLJ38_15435"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF013640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HSU40970.1"
                     /translation="YAPLLLTIRSASEGGAWKARDAERLELYGALLPLVDAVDVELAA
                     PIRRDVVRAARRAGRLIVLSQHDFARTPADAALDRVVERGLGAGADVVKVAAHLRGDA
                     DGARLAALLARHAGRPLVVIGMGEHGKKTRIFFPALGSLFTFASLDRGTAPGQLDLAE
                     TQRELRFFFPDYTPAAKPRAPQRRPPRRKPRRAR"
BASE COUNT          376 a          794 c          791 g          373 t
ORIGIN      
        1 gtcgttcgac ggctcgcgta gcccgcgcaa aagcgagatc acctgctcgc tcgagtcgag
       61 cgcggcgaac gccccgctgg cgccgctctt cggctcgagc gcggccgtca ccgccgcact
      121 ccaagcagcg tgctcggcgt ccgtgcgctg gtcggtgcgc cacgagagcg ccggaacatc
      181 gagggcggtc gtgtaacgct cttcgggagc ggcggacggg tgcaccacga cgaccgcgcg
      241 atcgacggga tgaaacgcgg ccggatcgta cggcggatgg caactcggcg agctctcgag
      301 aaactgctgg tccatcccgt cgaacgtgcg tgcaacggct gcgcgcagct ccgtcgcatc
      361 cggccgatcg tcgacgacgg cgacgaaaat ctccggcgtc gccggaccga gcgtgacgaa
      421 taaactcgcc tgcgtctccg acccgggcgg ccccggagcg ttgttcccct cgccgcacgc
      481 caaggcgacg aacgcaaagc ccagcagtgg tctgcgcatc gtagctcgcg aagcaatcaa
      541 cataccacgt cccataagca ctctttcgcg gcgctcccgg cgctcctcat gccaacgcag
      601 ttggcttagc tgcttgggac gtcgacgcgc acgctacctg cgccgcacga tgcgcaacgc
      661 tgcgctcgtt ctcgtctgcc ttgctcgacc gaggccgcgt tggagtatgg tcgtcggatg
      721 aacctgaggg cgtgcctgtc gatcgcgatc gcctgtctca tgctgtcgca agcctgcagc
      781 tcgggtgacg acgatgcgag cggcggcgcg ggaaacggcg gctccacggc gcaaggcacg
      841 ggtggggcgt ccggcactgg cggcggagcg agcaagtgcg acagcggctg cgtcgcgacc
      901 atcgcggcag cttgtccgaa cggccccacg gaccaagacg gttgcgtgaa cacttgtgag
      961 gcgctgagca cgggctcgtg cgccgcgacc tactccgcgt tccagacctg tgccgtcggc
     1021 aagccgatca cctgcaactc cgacggcatt ccagcggtca cggcttgcag cgacgagcaa
     1081 gcggcgttca tcgcctgcct caactgactg caatccgcag cgcacgcgcc gagctgagcg
     1141 tccccgctgc ggagcgtcaa aacgtgtatt cgacgatgtt cagcgacttc accttgtcgg
     1201 gccaggtgag ggagcgaatg cgctcggcga cgcaggcggc aaacttcgag ttcttgggtg
     1261 tcgtcgtgag gtcgagcccg acggccttgc cgtcccagat cgcgactttg gctttgaagt
     1321 gcgcgctgcc cggcttgcac ggctcgtaga gctcgggatg gttgagcggc agaccgagcg
     1381 cttcttgctc gatgttgagc cgcggggtgc cctggggcac ggcgttgatg gcgtcgagga
     1441 cggagccgtt ctctttgaac tcgggtgccg gcacgtcgga cgccttcttc gtcgtgtcgg
     1501 ctttcgtcgc agcgactggt ttggcgtcgt cgctcgacgc ggcgtcggac gccggcttgg
     1561 cttcgtcggc gctcggcgcg ggcgcgtcct tcgaagtggc gtcggaggtt ggcgaaagct
     1621 cggcggggcg ctgactgccg ccgcacgctg acgcgagaac gagaccgaaa atgcagctgc
     1681 taatacccag tgcccgcatc cccgcgacga taacgcccgc tcgcaagctc ggcaatgctg
     1741 ctcgtgttca gcgcgcgcgg cgcggcttcc tgcgcggcgg acggcgttgc ggggcacgcg
     1801 gctttgccgc cggcgtgtag tcgggaaaga aaaatctaag ctcgcgctgg gtctccgcca
     1861 aatcgagctg gcccggcgcc gtaccgcgat cgagtgacgc aaacgtaaac agcgagccga
     1921 gcgcggggaa aaagatgcgc gtcttcttgc cgtgctctcc catgccgatc accacgaggg
     1981 gccgcccggc atgacgcgcg aggagcgccg ccagtcgagc tccgtccgcg tcgcctcgca
     2041 ggtgtgcggc gactttcacg acgtccgctc ccgcgcccaa gccacgctcg acgacgcgat
     2101 cgagcgcggc gtccgctggc gtgcgcgcga aatcatgctg agacagcacg atcaaacgcc
     2161 cggcgcggcg cgcggcacgc accacgtccc ggcgaatcgg cgccgcgagc tccacgtcca
     2221 ccgcatcgac caacggtaag agcgcgccgt acagctcgag ccgctcggca tcgcgcgcct
     2281 tccaagctcc accttcgctc gccgaacgga tcgtgagcag cagcggcgcg tatt
//
LOCUS       DATIML010000891         2790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3656945, whole genome shotgun sequence.
ACCESSION   DATIML010000891 DATIML010000000
VERSION     DATIML010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3656945"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VLJ38_15440"
     CDS             complement(<1..419)
                     /locus_tag="VLJ38_15440"
                     /inference="COORDINATES: protein motif:HMM:NF024911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU40971.1"
                     /translation="MTRPERLRLAISGTYSTGKTTTTEALSLWVGIPRTHAQTMREIL
                     PEAFPGKALEDCSPSELFQLGIMRFTERAVREAQIGGSYISDGSSIHEWIYGKARLQV
                     GINPNGSELARLAQKALLLPFKKVIDEVNEGFGAVVKR"
     gene            complement(416..1489)
                     /locus_tag="VLJ38_15445"
     CDS             complement(416..1489)
                     /locus_tag="VLJ38_15445"
                     /inference="COORDINATES: protein motif:HMM:NF017469.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AvrD family protein"
                     /protein_id="HSU40972.1"
                     /translation="MKSGFSSQARAHDLPLRYSSIDLLLGDARGRFFGNGYRSIRRNV
                     VRVRLDAARREVLADASIEYPAAWSMKRERELTPHLSSLDALGVAAQLAEAYLRSVYR
                     LDDAGADKLRLARSALKPGPAPTTDLGNVGASCSLVDTTEQANGGVSRFVAKVGSIGV
                     ELSVEHPPLGEAFGVNASFERLSDVLGPPELSYYGCAYIRTELGVRDVLFDDSGERVS
                     ASIDMLPPANAAALRGLGSAHAPFFSEMTAIVTIAQLAQALLYRYDNVSRGQSNNLWM
                     RKILILSERSVPAALGMRVETWSKKMTLLPVKEGLWRTATFEYTAPGLAGEYTVAHLL
                     PEHRRDSQDPTSDAVDRAGAEDA"
     gene            complement(1705..2238)
                     /locus_tag="VLJ38_15450"
     CDS             complement(1705..2238)
                     /locus_tag="VLJ38_15450"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSU40973.1"
                     /translation="MAKRNGCELETLFTARECDVLALILLRATNRRIAEKLACSLKTV
                     EFHVSNILRKTGVASRAELMRAVDDTRNAGIDSALNARLCGALAELARERLQPPSQRT
                     AGQPEASRLLTKREQTVLDLLRAGRSNKEIALELGCSVRTAEYHVANVLRKTNASRRL
                     SLVGAQSKSDAPVRPSP"
     gene            complement(2363..2494)
                     /locus_tag="VLJ38_15455"
     CDS             complement(2363..2494)
                     /locus_tag="VLJ38_15455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40974.1"
                     /translation="MVLLAGAREEHHLLWQSEFEAAARDLGNVRLGVLKDDVLAESY"
BASE COUNT          463 a          908 c          911 g          508 t
ORIGIN      
        1 cgtttgacga cggcgccgaa tccctcgttc acttcgtcga tgaccttctt gaacgggagc
       61 agcaatgcct tttgcgcgag ccgggcgagc tcgctgccgt tcgggttgat gccgacttgt
      121 agccgggctt tgccgtaaat ccactcgtgg atcgaggagc cgtcggagat gtagctcccg
      181 ccgatctgag cttcgcgcac ggcgcgctcg gtgaagcgca tgatcccgag ctggaagagc
      241 tcgctcggtg agcagtcttc cagcgccttg ccggggaacg cttctggcag gatctctcgc
      301 atcgtctgag cgtgcgtgcg tggaatgccg acccaaagcg agagtgcttc ggtcgtcgtc
      361 gttttcccgg tcgagtacgt cccggaaatg gcgagccgca gccgttcggg gcgagtcatg
      421 cgtcttcggc tcccgctctg tcgacggcgt cgctcgtggg gtcctgcgag tcgcgtcgat
      481 gctcgggtaa cagatgcgcc acggtgtact cgcccgcgag ccccggcgcc gtgtactcga
      541 aggtggcggt gcgccacagt ccttccttga cgggcaacag tgtcatcttc ttgctccagg
      601 tttcgacgcg catgccgagc gcggcgggga cgctgcgctc gctcagaatc aggatcttgc
      661 gcatccacag gttgttgctc tgcccgcggc tcacgttgtc gtagcgatag agcagtgctt
      721 gggcgagctg agcgattgtc acgatcgccg tcatttcgga gaagaacggc gcatgcgcgg
      781 agccgagccc tctcagggcc gcggcgttcg ccggcggcag catgtcgatg gatgcgctca
      841 cgcgctcgcc gctgtcgtcg aacagcacat cgcggacgcc gagctcggtc cggatgtagg
      901 cgcagccgta atacgagagc tccggcggtc cgagcacgtc cgagagtcgt tcgaagctcg
      961 cgttcacgcc aaacgcctcg ccgagcggcg ggtgctctac gctgagctcg acgccgatcg
     1021 agccgacttt ggccacgaac cgcgaaacac cgccgttggc ctgctcggtc gtgtccacga
     1081 gcgagcagga cgcgccgacg ttcccgaggt cggtcgtcgg cgcggggccg ggcttcagcg
     1141 cagagcgcgc gagccgcaac ttgtccgcgc cggcgtcgtc gagccggtac acgctgcgga
     1201 gataagcctc cgcgagttga gcggcgacgc cgagcgcgtc cagactgctc aaatgaggcg
     1261 tgagctcgcg ctctcgtttc atcgaccagg ccgccggata ttcaatgctg gcatccgcca
     1321 gcacctcgcg ccgggcggcg tcgagccgta cgcgcacgac atttcggcga atcgagcgat
     1381 agccgttgcc gaagaaacga ccccgggcat cgcccagcaa gagatcgatg gaggagtagc
     1441 gtagcggtaa atcgtgtgct cgcgcctgcg aagaaaaccc gctcttcatg gaaacctccc
     1501 gcctgaagtt ctgacctatc cacctcgacc tcgagatgga ccatcggcgc gttgctgcgc
     1561 ctgccagcac acgcgcgagt tgacccgcgc gcagctggcg ccttagttga agatccgccg
     1621 ccctagtccc agacgattgg agcgccttcc cgcaggcgca cggagaaacc tacagagtgc
     1681 gaagcgattc gtctactggg gtgattacgg ggacgggcgt acgggagcat cgctcttgct
     1741 ctgcgcgccg accaagctca agcgccgtga cgcattcgtt ttccggagta cgttcgcgac
     1801 gtggtactcc gcggttcgca cgctgcagcc gagctcgagt gcgatttctt tgttgctgcg
     1861 gcccgctcgc agcaggtcga gcacagtctg ctcgcgcttc gtgagcaggc gcgacgcttc
     1921 tggttggccc gccgtacgct gactcggcgg ctgaagtcgc tcgcgggcaa gttcagcgag
     1981 cgcaccacag aggcgagcgt tcagcgccga gtcgatgcca gcgttgcgcg tgtcgtcgac
     2041 tgcacgcatg agctcggcgc gtgacgcaac gcctgttttg cgtaggatgt tcgatacgtg
     2101 aaattccacg gtctttagcg aacatgcgag cttttcggcg atgcgccggt tcgtcgctcg
     2161 cagcagaatg agcgcgagca cgtcgcattc gcgagccgtg aacagtgtct cgagctcgca
     2221 gccgttgcgt tttgccactg ccctgtcgct tctcttcatg caaccccctg aggctgtccc
     2281 catggcacga cgtgccacgc ctcgatatat acgtccagga taataaattg agttctacgc
     2341 cgccggagtg acggtcggcc gttcaataac tctcggccaa tacgtcgtcc ttcagcacgc
     2401 cgagccgtac attcccgaga tcgcgtgcgg cggcttcgaa ctcgctctgc cagagtaggt
     2461 ggtgctcctc gcgcgcaccc gcgaggagca ccacgcggcg ctcgctccga gctcgccaac
     2521 gggctcggcg agggcggagc ggagctgcag cgtgacgtac ggtccggccc gccagcgaaa
     2581 aacgcgcatt gcgccgacct cgagtgggag ctcgctcaca cggggtgata gcgagcggcg
     2641 cccgacccac gcgggcagaa cgccggaacg tcatggcgcg aatgcatcgt gacgggcgcc
     2701 gttcttgtca agcaggccgg cgcgcccgtc gcagcttgcc ccggacgccc gcaagcccca
     2761 cgctggcgag cgcccaaagc acgcacattg
//
LOCUS       DATIML010000892         3582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2499551, whole genome shotgun sequence.
ACCESSION   DATIML010000892 DATIML010000000
VERSION     DATIML010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2499551"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1188
                     /locus_tag="VLJ38_15460"
     CDS             <1..1188
                     /locus_tag="VLJ38_15460"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU40975.1"
                     /translation="DREQRTATLYALSRELSGARDAEQVLRVAREQLERVFESEIEVF
                     LPRGAGKELVRRAASSTTRAESERERSLAHWVFSHQQEAGLGTSTLPGGDALYVPLTA
                     SGGVVGVLGLRPRDEQRFASLERRRQVDAFAVQLAMALERAELAEETERARREIEAEQ
                     LRSSLLSSVSHDLRTPLAVITGAAGTLLEKPTEIPETVRLELIQTILDEAERLSRLIR
                     NLLDMTRLESGAVTLKRELLPIEELVGAALNRLESRLQGHEVKVELPTDLPLVPGDPI
                     LLEQALINLLENAVKYGKGPIEINAASYPDEVMLEVADRGSGIPAGEEARIFEKFQRA
                     GRDGSQGGVGLGLAICRAIATAHGGRIRAENRAGGGALFRLFLPVGSRNPLARAAATT
                     ESA"
     gene            1185..1895
                     /locus_tag="VLJ38_15465"
     CDS             1185..1895
                     /locus_tag="VLJ38_15465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU40976.1"
                     /translation="MSEVGPTILVIEDEAAMRKFLRVSLESNGYRWAEASSAREGLSQ
                     AASQNPELVLLDLGLPDLDGIEVTARLREWAKMPIIVISARGQEEDKVRALDAGADDY
                     LTKPFGVNELLARIRVALRHAHGAVGPSSPVLEIGGLKLDLDRREVFVDGQEVHLTPI
                     EYKLLALLAKHAGKVLTHRQILKDVWGPNQSEHTHYVRVHMAELRKKIEANPARPVYL
                     ATEPGVGYRLRDRPAEKE"
     gene            complement(1922..>3582)
                     /locus_tag="VLJ38_15470"
     CDS             complement(1922..>3582)
                     /locus_tag="VLJ38_15470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40977.1"
                     /translation="SALCITSLNARNLYVENGGTVVDNILTLYTLFLPLGARFSLDAV
                     RESWRLRPDRSVLDLNRPDPLNAPARVSSLVVLLLLVQWSCIYFFNTVQKDGAGWRDG
                     SALYWFFQQDRIVTPFGIWARNHLPFPLVRVMTYGALCIEGSLSVLILFPFAQKWTRR
                     VVLGLVWTLHGFIALSARIGPFSYAMMLFPLLLLGSEDFDWVTRPFRSEARRRQVILA
                     AESPFLFSLARLLDRFDPFDRLTFIDRRQAELVPAGAPDDPFLVVSRADGIFRHAAAW
                     RELTRALPFGVVLRVVFAVPGLEGVAVALARRLDTRQASWGRALGVRRGGQDPATAKP
                     AVLRPVPAVTARVREVLASGREVAVALLGVAVLSAILVQNPFVARRLHITRAEWMIEL
                     IEYPRILQGWSMFAPEPPYEDGRVVVDGRTADGRRFDPFSNGVPNLDPYAPDGWGHSQ
                     FWCDYHNRIRFGDNTQHRQHLREYLLHQHEQSGHPENRLVAFDVWWVSDRSPPPGVAR
                     GEPLPPEKLLSYGNVTDSGAAPLLGPLQAERSGRRRPDAPLHGP"
BASE COUNT          669 a         1199 c         1212 g          502 t
ORIGIN      
        1 gaccgcgagc aacgcacggc gacgctctac gcgctcagcc gcgagctttc cggcgcgcgc
       61 gatgccgagc aggtgctccg cgtcgcgcgc gaacaactcg agcgcgtgtt cgaaagcgag
      121 atcgaggtat ttctaccccg cggcgcgggc aaagagctcg tgcgccgcgc agcgagctcg
      181 accactcgcg ccgaaagcga gcgcgagcgc agcttggccc actgggtctt ttcgcatcag
      241 caagaggcgg ggctcggcac ctccacgctt cccggcggcg acgcactcta cgtgccgctc
      301 accgcttcgg gcggcgtggt cggcgtgctc ggcctgcggc cgcgcgacga gcaacgcttc
      361 gcctcgctcg aacggcgacg gcaagtcgac gccttcgccg tgcagctcgc gatggcgctc
      421 gaacgcgccg agctcgccga agaaaccgag cgcgcgcggc gcgagatcga agccgagcaa
      481 ctccggagct cgctcctgag ctcggtctcg cacgatttgc gcacgccgct cgccgtcatc
      541 actggcgccg ccggcacgct gctcgagaag ccgacggaaa tcccggagac ggtccgcctc
      601 gagctgattc agaccatcct cgacgaagcg gagcgcctca gccgcttgat ccgcaatctg
      661 ctcgacatga ctcgactcga gtccggcgcc gtgaccctga agcgcgagct cttgccgatc
      721 gaggagctcg tgggcgcggc gctcaatcgc ttggagtcac ggctccaagg acacgaagtg
      781 aaagtcgagc tcccgacgga cttgccgctc gtgcccggcg atccgattct cctcgagcaa
      841 gccttgatca acttgctcga aaacgcggtt aaatacggca agggcccgat cgagatcaac
      901 gccgcgagct atcctgacga ggtcatgctc gaagtcgccg atcgcggaag cggcatccct
      961 gcgggcgagg aggcgcgcat cttcgagaaa tttcagcgcg cgggccgtga cggcagccaa
     1021 ggcggtgtcg gcttgggcct cgcgatctgc cgtgcgattg cgacggcgca cggcggccgt
     1081 atccgcgccg aaaaccgcgc gggcgggggc gctctgttcc gattgttcct gcccgtcggt
     1141 agccggaacc cgctcgcccg cgctgcagcc acgacggaga gtgcatgagc gaggtcggac
     1201 cgacgatcct cgtcatcgag gacgaggcgg cgatgcgcaa gttcttgcgc gtgtcgctcg
     1261 agagcaacgg ttatcgctgg gccgaagcga gctcggcccg tgaagggctt tcccaggccg
     1321 cgtcccagaa ccccgagctc gtgctgctcg atctcgggct gcccgatctc gacgggatcg
     1381 aggtcacggc gcgcctgcgc gaatgggcga aaatgcccat catcgtgatt tccgcgcgcg
     1441 gccaagagga ggacaaagtg cgcgcgctcg acgcgggcgc cgacgattac ttgacgaagc
     1501 cgttcggcgt gaacgaactc ttggcgcgca ttcgcgtcgc cttgcgccac gcgcacggag
     1561 ccgtggggcc gtcctcaccc gtgctcgaga tcggggggct caagctcgat ctcgatcggc
     1621 gcgaggtgtt cgtcgacggc caggaggtcc acctcacgcc catcgagtac aagctgctcg
     1681 cgctcctcgc caagcacgcc ggcaaggtgc tcacgcaccg gcaaatcttg aaagacgtgt
     1741 ggggaccgaa ccagtccgag cacacgcact acgtgcgcgt gcacatggcc gagctgcgaa
     1801 agaagatcga agcgaatccc gcgcggcccg tgtatctggc gaccgagccg ggcgtcggct
     1861 accgcttgcg cgatcgaccg gccgaaaagg agtagcggcg cgtgctcgag ccggtttcac
     1921 gtcacggtcc gtgcaaaggc gcgtcgggac gccgccggcc gcttcgctcc gcctggagcg
     1981 ggccgagtaa cggcgcggca cccgaatcgg tcacgttgcc gtaggagagc agcttttcgg
     2041 gcggtagcgg ctcgccgcgc gcgaccccgg gcggcggcga acgatcgctc acccaccaaa
     2101 cgtcgaaggc gacgagccgg ttctcgggat ggccgctctg ctcgtgctga tgtagcaagt
     2161 actcgcgcaa gtgctggcga tgctgggtgt tgtcgccgaa gcgaatgcga ttgtggtagt
     2221 cgcaccaaaa ctgggagtga ccccagccgt cgggcgcgta cggatcgagg ttcggcacgc
     2281 cgttcgagaa cggatcgaaa cgccgcccgt ctgcggtgcg gccgtccacc accacgcgcc
     2341 cgtcctcgta gggcggctcc ggcgcaaaca tcgaccaacc ctgcaaaatg cgaggatatt
     2401 cgatgagctc gatcatccac tcggcgcgcg tgatgtgcag gcgccgcgcc acgaagggat
     2461 tctgcacgag gatggcgctc agcacggcga cacccagcaa cgcgacggcc acttcacgac
     2521 ccgacgccaa tacctcgcgc actcgggctg tgacggccgg cacggggcgc aagacggctg
     2581 gtttcgcggt cgccggatct tggcctccgc gacgcacgcc gagggcacgc ccccagctcg
     2641 cctgccgcgt gtcgaggcgg cgggcgagcg cgacagcgac accttcgagt cccggaaccg
     2701 cgaagaccac gcgcagcacg acgccgaacg gcagcgcgcg cgtgagctcc cgccacgccg
     2761 cggcgtgccg gaaaatcccg tccgcgcgcg agacgaccag gaacggatcg tccggcgcac
     2821 ccgcgggaac gagctcggcc tgccgccgat cgatgaacgt gagtcgatcg aaaggatcga
     2881 agcgatcgag cagacgcgcg agcgaaaaca agaaggggct ctctgccgcg aggatgacct
     2941 ggcgccggcg tgcctcgctc cggaacggcc gcgtcaccca gtcgaagtcc tcgctgccga
     3001 gcaggagcag cggaaacagc atcatcgcgt aggagaacgg gccgatgcgc gccgagagcg
     3061 caatgaagcc gtgcagggtc cacacgagcc ccagcacgac gcggcgcgtc cacttttgcg
     3121 cgaagggaaa gaggatgagg acgctcaggc tgccctcgat acagagcgcg ccgtaggtca
     3181 tcacgcgcac gagcggaaac ggcaggtgat tcctggccca aatgccgaaa ggcgtgacga
     3241 tgcgatcctg ctggaagaac cagtagagcg cgctgccgtc acgccagccc gcgccgtcct
     3301 tctgcacggt gttgaagaaa tagatgcacg accactgcac caacaaaagc agaacgacga
     3361 gcgaggacac gcgcgccgga gcgttcagcg ggtcgggccg attcaggtcg agcacgctgc
     3421 gatcgggccg cagccgccac gattcacgaa cggcgtcgag cgagaagcgc gcgccgagcg
     3481 gcaaaaacag cgtgtagagc gtgagaatgt tgtcgacgac ggtgccgcca ttctcgacgt
     3541 acaaattgcg cgcgttcagg ctcgtgatgc agagcgcgga ca
//
LOCUS       DATIML010000893         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1350280, whole genome shotgun sequence.
ACCESSION   DATIML010000893 DATIML010000000
VERSION     DATIML010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1350280"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VLJ38_15475"
     CDS             <1..888
                     /locus_tag="VLJ38_15475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU40978.1"
                     /translation="GLVQRGRAAYDRLRDVYVAEPDIIDGPAPAPRAISGRLEVRNLT
                     FAYGTNQVLRGVDLVLEPGRSLAIVGRTGSGKSTLAVLLARLQPTPRGCVFLDGTDVC
                     DLPLAVVRGAVGYAQQSAFLFSTTAARNIGFPLDDPDSPESFERIQHAAQEARVHDEI
                     TSLPDGYDTVVGERGVQLSGGQKQRVALAMAFASDPRILILDDPLSAVDARTERGILE
                     AIDRQRAKRSVLLVTHRVAAAARCDHIVVLDAGRILEQGTHAELCARGGLYAAFAEEQ
                     RIEHELEELGRGSAEVQVA"
     gene            1101..2228
                     /locus_tag="VLJ38_15480"
                     /pseudo
     CDS             1101..2228
                     /locus_tag="VLJ38_15480"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
     gene            2299..>2431
                     /locus_tag="VLJ38_15485"
     CDS             2299..>2431
                     /locus_tag="VLJ38_15485"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU40979.1"
                     /translation="MALVGPTGSGKTTITALLLRLYDIESGTVRVFGDDVTGLDRHEL
                     "
BASE COUNT          363 a          858 c          824 g          386 t
ORIGIN      
        1 ggcttggtgc agcgcggccg ggccgcctac gaccggctgc gcgacgttta cgtggccgag
       61 ccggacatca tcgacggtcc agcgccggcg ccccgcgcga tttcgggccg gctcgaagtg
      121 cgaaacctca cctttgccta cggcacgaac caagtgctgc gcggcgtgga cctggtgctc
      181 gagcccggcc gctcgctcgc gatcgtcggc cgcacgggca gcggcaagag cacgctcgcc
      241 gtgctgctcg cgcgcttgca accgacgccg cgcggctgcg tcttcctcga cggcaccgac
      301 gtgtgcgact tgccgctcgc ggtcgtgcgc ggcgccgtcg gctacgccca gcagagcgcg
      361 tttttgttct cgaccacggc ggcgcgcaac atcggcttcc cgctcgacga cccggactcg
      421 cccgagagtt tcgaacgcat ccagcacgcc gcgcaagagg cgcgcgtcca cgacgaaatc
      481 acgtcgctgc ccgacggcta cgacaccgtc gtgggcgaac ggggcgtgca gctctcgggc
      541 gggcaaaaac agcgcgtcgc gctcgcgatg gccttcgcgt ccgatccgcg catcttgatc
      601 ctggacgacc cgctcagcgc cgtcgacgcc cgcaccgagc gcggtatcct cgaagccatc
      661 gatcgccagc gcgccaagcg ctcggtcttg ctcgtgaccc accgcgtcgc ggcggcggcg
      721 cgctgcgatc acatcgtggt gctcgacgcc ggccgcatcc tcgagcaagg cacgcacgcc
      781 gagctctgcg cgcgcggtgg cctctacgcc gcgttcgccg aggagcagcg catcgagcac
      841 gagctcgaag agctcgggcg gggcagcgcc gaggtgcagg tcgcatgacg caagcggccc
      901 tgccgaacaa aagcgacgcg cagcgccgca ccgagaagat cctcgccgcc ttccacgacg
      961 aggagcgctt cacgaagagc tacgacgcgc gcctcgctcg ccacatctgg cgatttttga
     1021 ggccgcaccg cgtgctgatg gggctatccg tcacggtgct cctcatcacc tcggcgctct
     1081 cgctgatccg gccgctcgtg atgcgcgagg gcatcgacaa ggccgtgctc ggcgggaacc
     1141 gagacgagct catgcatttc ggcctcgtgt tcgcgggcgt gctcctggcc gagcaggtgc
     1201 tcggcttcgt gcacatgtac gcgatgcaga tcgtgggcgc gcgctcgatg gcgacgctcc
     1261 gccgcgaggt gtttcgtttc ctgcacggcc ggcggctctc gtacttcgac cgccagctcg
     1321 tcggacggct cgtctcgcgc gtcacgaacg acgtcgacgc gatcctcgaa gcgttcgcgt
     1381 cgggcgccgt caacggtatc ggcgacgtcg tgcgcctcgc cggcatcgtg gtgctgatga
     1441 tttcgctcga ttggcggctc tcgtgcatcg ccttcatcgc cgtgccgccc gtggcgctct
     1501 tcgtgcgcat gatccggcgc ccgatgcgcg aagcgctgcg cgagattcgc gcgcggacct
     1561 cgcgcatgaa cgcgatcacg aacgagcaag tctcgggcat gagcctgatt caggcgtacg
     1621 gccggcaaga cgccgcgcgg cgcgatttcg acgagacgaa cgtcgcctac cgcgacgcca
     1681 acgtgacgag catcaaatgg gaggcgattc aggacgccgc catcgacatg gtcggctccg
     1741 tctgcctcgc gtcgatcatc gtcgcgctcg gctaccggcc ggtatcgttc gggacggtcg
     1801 tggcgttcag cgcgtacttg agtcaattct tcgaacccat cagccagctc gcgcagcgct
     1861 acacgctcgt gcaaggcgcg atgacgggcg ccgagcgcgt cttcagtctg ctcgagctcg
     1921 gtgaggtcga cgccgagcca cgcgagcccg cgccgcccgc gcacagcgag ctcgccgtcg
     1981 cgctcgagca cgtgaacttc gcctacaagc cgggtgtacc ggtgctgacc gatctgagcc
     2041 tcgggatccg gcgcggtgaa aaggtcgcgc tcgtcgggcc cacgggctcg ggaaaaacca
     2101 ccatcacggc gctcttgcta cggctctacg acgtggagag cggcacggtg cgcgtgttcg
     2161 gcgacgacgt gacgggcctc gatcggcacg cgctccggcg ccggtttgcc gtggtgccgc
     2221 aggacgtcgt gctcttcccg ggcacggtgg ccgaaaacgt cgccgcgggt gaagtccccg
     2281 atccggcgcg gcgaaaaggt ggcgctcgtc gggccgacgg gctcgggcaa gaccacgatc
     2341 acggcgctct tactccggct ctacgacatc gagagtggca cggtgcgcgt gttcggcgac
     2401 gacgtgacgg gcctcgatcg gcacgagctc c
//
LOCUS       DATIML010000894         2909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1058902, whole genome shotgun sequence.
ACCESSION   DATIML010000894 DATIML010000000
VERSION     DATIML010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1058902"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VLJ38_15490"
     CDS             complement(<1..215)
                     /locus_tag="VLJ38_15490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU40980.1"
                     /translation="MSRPARRVAGALACLFVASGCGQASQLRGQIAGLEKIADQAERN
                     GAKRCAPRELAVARSQLEFASLELDQG"
     gene            complement(212..565)
                     /locus_tag="VLJ38_15495"
     CDS             complement(212..565)
                     /locus_tag="VLJ38_15495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4398 domain-containing protein"
                     /protein_id="HSU40981.1"
                     /translation="MPPLHTPPVLHRVIARLRRGVGVTTLGLALLLLTGCGNTLYAVQ
                     ANAASSKLEEARELGAERYAPYEYWFAREHIEKAESEASEADYGDAAHLAAVAEDYAD
                     KAIKLSRDARRGAGR"
     gene            complement(762..1406)
                     /gene="lexA"
                     /locus_tag="VLJ38_15500"
     CDS             complement(762..1406)
                     /gene="lexA"
                     /locus_tag="VLJ38_15500"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HSU40982.1"
                     /translation="MQGLTKRQEQTLDYIRKSIGERGYPPTLREIGEHMGIRSTNGVN
                     DHLRALERKGYLRREDMKSRALKLVEASVPQPVRAPLNEDDIIDIPVLGRVAAGLPLL
                     AEENVIDTVRVDRMLVRGGREVFGLRVTGDSMIEAGILGGDYIFVRKQATAERGDIVV
                     ALIGDEATVKYFYPERDYVRFQPANAKMAPILVRATDFKSTMLLGKVVGLYRRL"
     gene            complement(1855..2319)
                     /locus_tag="VLJ38_15505"
     CDS             complement(1855..2319)
                     /locus_tag="VLJ38_15505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSU40983.1"
                     /translation="MDDRLEQLARVELFAGLKPAALELIAKVAAEETHALGTKIFQHG
                     DAGDKLYLILEGKVRISREVPGMGEEALAVLGPGQLFGEMALLDESPRSADARVHERC
                     RVLSIAKDGFDDLLFMHKDLAYEVLWSIVGMLVKRLRETNDKLTFLSVSGKF"
     gene            complement(2371..>2909)
                     /locus_tag="VLJ38_15510"
     CDS             complement(2371..>2909)
                     /locus_tag="VLJ38_15510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40984.1"
                     /translation="PPHEEAAKPPAAAEAGKVLTAEPDPNEPVDLTGDGFVSGNGDRF
                     AGGVTATRGTAKTAVRSAEASPTGTGTAPRAAPPAPAPTANLSRPAMPGPGSWSDCGF
                     PAEADAEGINFKVVKIMVTVKPDGHARSVTVLADPGFGFAAIARTCALRKTFTPALNA
                     AGEPVEQTTPPFSVKFER"
BASE COUNT          477 a          942 c          964 g          526 t
ORIGIN      
        1 aacccctgat cgagctcgag gctcgcgaat tcgagctgac tgcgcgcaac cgcgagctcg
       61 cgcggcgcgc agcgcttggc gccgttgcgc tcggcctggt cggcgatctt ttcgaggccg
      121 gcgatttggc cgcgtagctg cgacgcctgc ccgcagccgc tcgcgacgaa caagcacgcg
      181 agcgcgccgg ccactcgccg tgccggcctg ctcatcgtcc ggctccgcgt cgcgcgtcgc
      241 gggagagctt gatcgccttg tcggcgtagt cctcggcgac ggctgccagg tgcgccgcgt
      301 cgccgtagtc ggcttccgac gcctccgact cggccttctc gatgtgctcg cgcgcgaacc
      361 agtactcgta cggggcgtag cgctccgcgc cgagctcgcg tgcctcctcg agcttggagg
      421 aagcagcgtt ggcttgaacg gcgtaaagcg tgttgccgca acccgtcagc aggagcagag
      481 caagaccgag cgtcgttacc ccgacgccgc gacgaagcct ggcgatgacc cggtgaagaa
      541 cgggtggggt atggagaggc ggcatgctgt ggacgcgagc gaaacgcgcg cgttttcacg
      601 ccgaacgcta gcaattcgcc gaagtttccg tcaaccaccg cgcggcttca ccttgcgatt
      661 tccgcggacg gtcgtcgccc gctcccacgc ccgagccaag tggcagacgg acgtcggatc
      721 ggctcagcta cggctgctcg gcgcgcgcga cgaaagttcc gtcagaggcg ccgataaagg
      781 ccgacgactt tgccgagcag catcgtcgat ttgaagtcgg tcgcgcgcac gagaatgggc
      841 gccattttcg cgttggcggg ctgaaaccgc acgtaatccc gctccggata gaagtatttc
      901 acggtggctt cgtccccgat cagcgcgacg acgatgtcac cccgctcggc cgtcgcctgc
      961 ttacgcacga aaatgtagtc tccacccaag atgccggctt cgatcatcga gtcgccggtc
     1021 acgcggagtc cgaacacctc gcgcccgcca cggacgagca tccgatcgac gcgcacggtg
     1081 tcgatgacgt tctcctcggc gaggaggggc aggcctgcgg ccacccgtcc gagcaccggg
     1141 atgtcgatga tgtcgtcttc gttgagcgga gcgcgaacgg gctgcggcac ggacgcttcg
     1201 acgagcttga gcgcgcggct cttcatgtcc tcccgccgga ggtaaccctt acgttcgagc
     1261 gctcgcaggt gatcgttgac gccgttcgtc gaacgaattc ccatgtgctc cccgatctcg
     1321 cgcagggtcg gagggtagcc gcgctcgccg atcgacttgc gaatgtagtc gagggtctgc
     1381 tcttgacgct tggtcagccc ttgcatgtcg agcgaaggat actgaacggg tgttacgaag
     1441 tcaaagataa ggtggttttt tgtttagggt gatcgtttga gcccgggggt ccttcgcagg
     1501 taaagcctac ttccgccggt ttcgccggtt tgttgcacgg ctcggggctg ctcgtggcga
     1561 tcgagatctg gtctgccaaa gaccgccgcg tcgttccagc gggccttcgg cccgcgcggc
     1621 ttacgccgta accgacgtac tcttccacgg ggtcacacgt cgttcggcgc tccctgcgtt
     1681 gcttctgcct taccagatca cgatcggccc aagcggcgac gacccggggc aacaaaccgg
     1741 cgagaccggc gggacaaact cgacaataga tcagggacgc gtggcctttc ccaacgcacc
     1801 cactcaaaat tccaaatcaa aagcgcgcgc tagacgcggt ggcttaccca gccctcaaaa
     1861 tttcccagaa acactcaaga aagtcagctt gtcattcgtc tcccgcaacc gcttcacgag
     1921 catgccgacg atgctccaga gcacttcgta agccaggtct ttgtgcatga agaggaggtc
     1981 gtcgaagccg tctttggcga tggagagcac gcggcaacgt tcgtggacgc gtgcgtcggc
     2041 cgaccgcggc gactcgtcga gcagcgccat ttcgccgaac aattgacctg ggccgagcac
     2101 ggcgagggcc tcttcgccca tgccggggac ctcgcggctg atgcggacct tgccctcgag
     2161 gatgaggtag agcttgtcgc cggcgtcgcc gtgctgaaag attttcgtgc cgagcgcgtg
     2221 cgtctcttcg gccgcgacct tggcgatgag ctcgagcgcc gcgggcttca ggccggcaaa
     2281 aagctcgacg cgggcgagct gctcgagccg atcgtccatc cgagcgtgcc acgatagtcc
     2341 gaaacggcac gctcccccaa gcttgcgcta ctagcgctcg aatttgacgc tgaaaggagg
     2401 cgtggtctgc tcgacgggct cacccgcagc gttgagcgct ggtgtgaagg tcttccgcaa
     2461 ggcgcacgtg cgggcgatcg cggcgaagcc gaagccggga tccgcaagta cggtgaccga
     2521 ccgagcgtgg ccgtcgggtt tgaccgtcac catgatcttc acgaccttga agttgatgcc
     2581 ttcggcgtcg gcttctgccg ggaacccgca gtcgctccac gagccggggc cgggcatggc
     2641 ggggcgtgaa agattggccg tgggtgcggg cgccggcgga gcggcccgtg gagcggtgcc
     2701 ggtgccggtc gggcttgctt cggccgagcg caccgcggtt ttggcagtgc cgcgcgttgc
     2761 cgtgacgcca cccgcgaagc ggtcgccgtt gcccgagacg aagccgtcgc ccgtgagatc
     2821 cacgggttca ttcggatcgg gctctgcggt gagcactttc cccgcttccg cagccgcggg
     2881 tggtttggcc gcctcctcat ggggcggcg
//
LOCUS       DATIML010000895         1552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3657758, whole genome shotgun sequence.
ACCESSION   DATIML010000895 DATIML010000000
VERSION     DATIML010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3657758"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..559
                     /gene="tadA"
                     /locus_tag="VLJ38_15515"
     CDS             <1..559
                     /gene="tadA"
                     /locus_tag="VLJ38_15515"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HSU40985.1"
                     /translation="GAAACACWRHFAALQRAFQFLPRAPLMSNLPNDDEAWMRLALAE
                     ADAATLHGDVPVGAVVVSAEGVELSRDHNRREALADPTAHAELLAVRRAAQSRGHWRL
                     EGATLFVTLEPCAMCAGALVNCRIARVVFGALDPKAGALASLFALGSDARLNHRFAVT
                     GGVLASDGAERLSRFFKKLRAAGEK"
     gene            706..>1552
                     /locus_tag="VLJ38_15520"
     CDS             706..>1552
                     /locus_tag="VLJ38_15520"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF006707.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HSU40986.1"
                     /translation="MSELASIQTHLGDKASYYLEHVSKTVSKDKLHLPSPTFVNDIWV
                     NSDRNQQTLRSIEDLFGHGRLAGTGYLSILPVDQGIEHSGGASFAKNPIYFDPENIVK
                     LAIEGGCNAVASTFGVLGSVARKYAHKIPFMVKINHNELLTYPNKAEQITWGTIKQCW
                     DMGCTAVGATVYFGSADASRQIVEVSKLFEQAHELGMATVLWCYLRNNAFKVGSTDYH
                     LSADLTGQANHLGVTMSADIIKQKLPENNGGFKALNSGSSSYGKLDERIYTELTSDHP
                     IDLCRY"
BASE COUNT          289 a          544 c          470 g          249 t
ORIGIN      
        1 tggcgccgca gcatgcgcgt gttggcggca tttcgcggcc ttacagcgcg cgttccagtt
       61 tttgccccga gcgccgctga tgtcgaacct accgaacgac gacgaagcct ggatgcgcct
      121 cgcgctcgcg gaagcggacg cggcgacatt gcacggcgac gtccccgtgg gcgccgtcgt
      181 ggtttcggcg gaaggcgtcg agctttcgcg cgatcacaac cggcgcgaag cgctcgccga
      241 tccgacggcc cacgccgagc tcctcgccgt acgcagggcg gcgcagagcc gcggtcactg
      301 gcgcctcgag ggcgcgacgc tgttcgtcac gctcgagccc tgcgcgatgt gcgcgggggc
      361 gctcgtgaat tgccgcatcg cgcgcgtcgt cttcggcgcg ctcgacccga aagcaggcgc
      421 gctcgcctcg ctcttcgcgc tcggcagtga cgcgcgcttg aaccaccgct tcgccgtaac
      481 cggcggcgtg ctcgcgagcg acggcgccga acggctgagc cggttcttca aaaaattgcg
      541 cgccgcgggc gagaagtaac cgagctcgac gcagcgcgtc tcgaaccgag acccaagcga
      601 gaaacgtccg cgaaatgcgc gctttcgagc agcttctcag gcggtcgcag gggctcgccc
      661 tttgagctag tctccgccac cctctatccc tttccggagt cgatcatgag cgagttagcc
      721 agtattcaaa cccacctcgg cgacaaggcg agctactacc tcgagcacgt ctcgaagacc
      781 gtcagcaaag acaagctgca cctgccgtcc ccgacgttcg tgaatgacat ctgggtgaac
      841 tcggatcgca accagcagac gctgcgcagc atcgaggacc tcttcggcca cggccgtctc
      901 gccggcacgg gctacctctc gatcctcccg gtcgatcagg gtatcgagca ctcgggcggc
      961 gcttcgttcg cgaagaatcc gatctacttc gatcccgaga acatcgtgaa gctcgcgatc
     1021 gaaggcgggt gcaacgcggt cgccagcacc ttcggcgtgc tcggctcggt cgcgcgcaaa
     1081 tacgcgcaca aaatcccgtt catggtgaag atcaaccaca acgagctcct cacctacccc
     1141 aacaaagccg agcaaatcac ctggggcacc atcaagcagt gctgggacat gggctgcacg
     1201 gccgtgggcg ccacggtcta cttcggctcc gccgacgcct cgcgccagat cgtcgaagtc
     1261 tcgaagctct tcgagcaggc gcacgagctc ggcatggcga ccgtgctctg gtgctacctc
     1321 cggaacaacg cgttcaaggt cggcagcacc gactaccacc tctcggccga tctcaccggc
     1381 caggccaatc acctcggcgt gacgatgagc gccgacatca tcaagcagaa gctcccggag
     1441 aacaacggcg gcttcaaggc gctgaacagc ggttcctcgt cgtacggcaa gctcgacgag
     1501 cgcatctaca ccgagctcac gagcgatcac ccgatcgacc tctgccgcta cc
//
LOCUS       DATIML010000896         1959 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1637663, whole genome shotgun sequence.
ACCESSION   DATIML010000896 DATIML010000000
VERSION     DATIML010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1637663"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VLJ38_15525"
     CDS             complement(<1..642)
                     /locus_tag="VLJ38_15525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSU40987.1"
                     /translation="MAEAPRPSRVTLALGVLGGALVVFLLLPIIGLISGTSFADARAG
                     LAHPLVAPALELSLVTTTLSVMLVVVLGTPLAWLVARTPGRAARFLESSLKLPIVLPP
                     AVAGLGLLLAFGRASALGELLARVGVSVPFTTTAVVLAQVFVSAPFYVEAAIAAFRRL
                     DTSLLVIAQTLGASPARVLLRVSLPLAAPGLLSGAALSWARALGEFGATLMFAG"
     gene            complement(649..1470)
                     /gene="modA"
                     /locus_tag="VLJ38_15530"
     CDS             complement(649..1470)
                     /gene="modA"
                     /locus_tag="VLJ38_15530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HSU40988.1"
                     /translation="MIARSARRSLLLCCFVTLAASCATGTKRGAGAPEHELTVFAAAS
                     LREAFTALGQRFEALHAGTHVVLSFAGSQTLRSQIEHGAPADVFASADERHMSALAAE
                     GHVTAPKLFAQNELVVAVSRAQAGTLREFRQLPAATRIVLGAPEVPIGEYTRQALERA
                     NADLGADFRARVEAHVVSREPDVRQVLAKIALGEADAGIVYRTDALAAKDKVALVPIP
                     AAHNVLAKYPVAVAAHAPEADLGRAFVELLLSADGARILADNGFLPVHGAKADAR"
     gene            1535..>1959
                     /locus_tag="VLJ38_15535"
     CDS             1535..>1959
                     /locus_tag="VLJ38_15535"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSU40989.1"
                     /translation="MLESTRTSLMIGLFVGGRGSRLGGVAKGNLALPSGETLAARLVA
                     RSRDALPGTPIVLVGAAEAYAHLGLPAVPDDPQGIGPLGGLRALLAHAEGRGRTHALA
                     LSCDLPYLEAPLIARLGVEAPAADFLAPRDGELWQTLVAR"
BASE COUNT          318 a          696 c          689 g          256 t
ORIGIN      
        1 gccggcgaac atcagcgtcg cgccgaactc cccgagcgcg cgcgcccaag agagcgcagc
       61 ccccgagagc agcccgggcg ccgcgagcgg cagactcacg cgaagcagca cgcgtgccgg
      121 cgacgcgccg agcgtctgcg caatcacgag caggctcgtg tccaggcgcc gaaacgccgc
      181 aattgcggct tcgacgtaaa acggcgccga aacgaagact tgcgcgagca cgaccgcggt
      241 cgtcgtgaag ggtaccgaga ctccgacgcg cgcgagcaac tcgccgagtg cgctcgcgcg
      301 gccgaacgcc agcaagagcc cgaggccggc gacagccggc ggcaacacga tcggcagctt
      361 gagcgacgac tcgagaaagc gcgcggcgcg ccccggcgtg cgcgcgacga gccacgcgag
      421 gggcgtgccc agcacgacga cgagcatgac gctgagcgtc gtcgtcacca agctgagctc
      481 gagcgccggc gcgacgagtg ggtgagcgag ccccgcgcgc gcgtcggcga agctcgtccc
      541 cgagatcaag ccgatgatgg gcaacagcaa gaagacgacc agcgcgccgc cgagtacgcc
      601 gagcgccaac gtgactcgag aagggcgagg agcttctgcc atcgtcactc agcgcgcgtc
      661 ggccttcgct ccatgcacgg gcaaaaagcc gttgtcggca aggatgcgcg cgccatcggc
      721 cgacaagagc agctcgacga aggcacggcc aaggtccgcc tctggcgcgt gcgccgcgac
      781 ggcgacagga tactttgcca gcacgttgtg ggccgctgga atcggcacga gcgcgacctt
      841 gtctttggcg gcgagcgcgt ccgtgcggta gacgatcccg gcgtccgcct cgccgagtgc
      901 gatcttcgcg aggacctgcc gcacgtcggg ctcgcgtgag accacgtgcg cttcgacgcg
      961 ggcgcgaaag tcagcgccca gatcggcgtt ggcgcgttcg agcgcctggc gcgtgtattc
     1021 gccgatgggc acctcgggcg ccccgagcac gatgcgcgtc gcggccggca gctggcgaaa
     1081 ctcgcgcagc gtgcccgcct gcgcgcgcga gacggccacg acgagctcgt tttgagcgaa
     1141 gagtttcggc gctgtgacgt gaccttccgc tgcgagagcg gacatgtgac gctcgtcggc
     1201 cgacgcgaag acgtccgcgg gcgcgccgtg ctcgatctgc gagcgcaagg tctggctgcc
     1261 cgcgaaactc aggaccacgt gcgtgccggc gtggagcgcc tcgaagcgct gaccgagcgc
     1321 cgtgaacgcc tcacgcaggg aggccgccgc gaacacggtg agctcgtgct ctggcgcgcc
     1381 cgccccgcgc ttcgtgccgg tcgcgcagct cgcggcgagc gtgacgaagc agcagaggag
     1441 gagtgaacgc ctcgcgcttc gcgcaatcat gcggggtctt tttacacccg cgacgcttgc
     1501 atcgaacgtc cattttcggt cattgctagt ctcgatgctc gaatccacgc gcacctcact
     1561 catgatcgga cttttcgtcg gggggcgcgg ctcgcgcctc ggcggcgtcg cgaaaggcaa
     1621 cctcgcgctc ccgagcgggg aaaccctcgc cgcacggctc gtcgcgcgct cgcgtgacgc
     1681 gctacccggc acaccgatcg tcctcgtcgg tgccgcggag gcgtacgctc acttgggcct
     1741 gccggcggtc cccgacgacc cgcagggcat cggccccctc ggcggactac gtgccctgct
     1801 cgcacacgcc gaagggcgag gtcgcacgca cgcgctcgcc ctttcgtgcg acttgcccta
     1861 cctcgaggcg ccgctcatcg cgcgactcgg cgtcgaggct ccggcggcgg actttctcgc
     1921 gccgcgcgac ggcgagctgt ggcagacgct cgtcgcgcg
//
LOCUS       DATIML010000897         2119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4521718, whole genome shotgun sequence.
ACCESSION   DATIML010000897 DATIML010000000
VERSION     DATIML010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4521718"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..799)
                     /gene="alc"
                     /locus_tag="VLJ38_15540"
     CDS             complement(<1..799)
                     /gene="alc"
                     /locus_tag="VLJ38_15540"
                     /EC_number="3.5.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR02961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004037 - allantoicase activity [Evidence
                     IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoicase"
                     /protein_id="HSU40990.1"
                     /translation="MTELALFSNLVDLASAALGGRAVCATDDFFAGVERLVEPAEPEF
                     DPQRYTERGKWMDGWESRRKRGSGHDHAVLELGTAGTVFGFEIDTRHFIGNHPPFASI
                     EGARAPSGASADEVAAFDWRPLLSEVPLRPGTRNVFGALSQAAVNYVRLRIFPDGGVA
                     RLRVFGEVEPLAAPPEHDEESVQHVPAELVDLAALKTGAKVLACSDARFGAMNQLILP
                     GRARTMGEGWETRRGRPPDHRHDWLILKLAARGTPVVVEVDTNHYRGN"
     gene            complement(802..>2119)
                     /gene="allB"
                     /locus_tag="VLJ38_15545"
     CDS             complement(802..>2119)
                     /gene="allB"
                     /locus_tag="VLJ38_15545"
                     /EC_number="3.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004038 - allantoinase activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0050897 - cobalt ion binding [Evidence
                     IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="allantoinase AllB"
                     /protein_id="HSU40991.1"
                     /translation="KSTRVVGPRGMEPATVVVVDGRIEAVETGDVGLAETRDLGDLVL
                     APGLVDCHVHVNEPGRSEWEGFETATRAAAAGGVTAIVDMPLNCLPVTTNRAALAVKL
                     AACAGKCCIDIGFWGGVVPGNAEALEGLAAGGALGCKAFLVHSGIDEFPNATERDLRQ
                     ALPVLKDAGLPLLAHAELELDGPATTGDARAYATYLASRPAAWEDAAIRLLVELCRET
                     RCAVHIVHLSAASSLPLLRRAKEEGLPITVETCPHYLCFEAEGIADGATEYKCAPPIR
                     EHENREALWQGLLDGAIDFVITDHSPCLPALKCKPAGDFGAAWGGIASLQLGLSALWS
                     EASRRGATPADLSRWMSEAPARFAGLGGKKGRIARGYDADFVVWDPDARFAVGESALF
                     FRHPVSPYLGRELAGGVRETWLRGQRIFADGTHSPAPLGVPLLGRA"
BASE COUNT          345 a          749 c          712 g          313 t
ORIGIN      
        1 aattgccgcg atagtggtta gtgtcgacct cgacgacgac gggcgttccg cgcgcggcaa
       61 gtttcaggat cagccagtcg tgccggtggt cggggggacg gccgcgccgc gtttcccagc
      121 cctcgcccat cgtgcgagcg cgtcccggca agatgagctg gttcatggcg ccaaaacgcg
      181 cgtccgagca cgcgagcacc ttggcgccgg tcttgagcgc cgcgagatcg acgagctcgg
      241 ctgggacgtg ctgcacgctc tcctcatcgt gctcgggtgg ggcggcgagc ggctcgactt
      301 caccgaacac gcgcagccgc gcgacgccgc cgtccggaaa gatgcgcagc cgcacgtaat
      361 tgacggctgc ttgcgagagc gcgccgaaca cgttgcgcgt gccgggacgc agcgggacct
      421 ccgacaagag cggacgccag tcgaacgccg caacctcgtc cgcgctcgcg cccgacggcg
      481 cccgcgcccc ctcgatgctc gcaaagggcg ggtgattgcc gatgaaatga cgcgtatcta
      541 tctcgaagcc gaacaccgtg ccggccgtac cgagttcgag caccgcgtgg tcgtggcccg
      601 agccgcgctt gcggcggctc tcccagccgt ccatccattt gccgcgctcc gtgtagcgtt
      661 gggggtcgaa ctcgggctcg gccggctcga ccagccgctc gacgcccgcg aagaagtcgt
      721 ccgtcgcgca gacggcgcga ccaccgagcg cggctgacgc gaggtccacc aagttcgaaa
      781 acagcgcgag ctcggtcacg ctcacgccct cccgagcaat ggcacaccga gtggcgctgg
      841 agagtgcgta ccgtccgcaa agatgcgttg tccgcggagc cacgtctcgc gcacgccgcc
      901 cgcgagctct cggccgaggt aaggtgagac cgggtgacga aagaagagcg cggactcgcc
      961 gacggcgaac cgcgcgtcgg gatcccacac cacgaagtcc gcgtcatagc cgcgcgcaat
     1021 gcgacccttc ttcccgccga gaccggcgaa gcgcgcggga gcttcgctca tccagcggct
     1081 caagtcggcc ggtgtcgcgc cgcgccggct cgcctccgac cacagcgcgg aaagtccgag
     1141 ctggagcgaa gcaatcccgc cccacgcagc gccgaagtcg cccgcaggtt tgcacttgag
     1201 ggcaggcaag cagggactat ggtccgtgat cacgaaatcg atcgcaccgt cgagcaagcc
     1261 ttgccagagc gcctcgcggt tttcgtgctc gcgaatgggc ggcgcgcatt tgtattcggt
     1321 ggcgccgtcg gcgattcctt cggcttcgaa gcacaaatag tgcgggcaag tctcgaccgt
     1381 gatcggcaag ccttcctctt tggctcggcg caagagcggt agcgagcttg cggccgacag
     1441 atgcacgatg tgaacggcac agcgggtctc gcgacaaagc tcgacgagta gccgaatggc
     1501 ggcatcctcc caagccgcgg gacgcgacgc gaggtacgtc gcgtacgctc gcgcatcacc
     1561 cgtcgtcgcg gggccgtcca gctcgagctc ggcgtgcgcg agcagcggca acccggcgtc
     1621 tttgagcacg ggcagcgcct gcctcaagtc gcgttcggtc gcgttcggaa attcgtcgat
     1681 ccccgaatgc acgaggaacg ccttgcaccc gagcgcgccg cccgcggcga gcccctcgag
     1741 cgcctcggcg ttgccgggca cgacgccgcc ccaaaacccg atgtcgatgc agcatttccc
     1801 cgcgcaggcg gcgagtttca cagcgagcgc ggcgcgattc gtcgtcacgg gcaggcaatt
     1861 gagcggcatg tcgacgatgg cggtcactcc gcccgcggcc gccgcgcgcg tcgccgtttc
     1921 gaagccttcc cactcgctgc gtcccggctc gttcacgtgc acgtggcagt cgacgagccc
     1981 gggcgcaagc acgaggtcgc cgaggtcgcg cgtttcggcg agtcccacgt cgcccgtctc
     2041 gacggcttcg atgcggccgt cgaccacgac gaccgtcgcg ggctccatgc cgcgcggacc
     2101 taccacgcgc gtgctcttc
//
LOCUS       DATIML010000898         1590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3081157, whole genome shotgun sequence.
ACCESSION   DATIML010000898 DATIML010000000
VERSION     DATIML010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3081157"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..532
                     /locus_tag="VLJ38_15550"
     CDS             <1..532
                     /locus_tag="VLJ38_15550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40992.1"
                     /translation="RGGAGSGRGGTSSGRGGTGAAGKAGAGGSATAGAGGSANGGAGA
                     GARGGAGGSPNGGANHGGAPGATLAAVQAIFDDRCVNCHDASKGGLPTYPMLPLTAGA
                     SHAALVNVAADETCGGVRVVPGNPDASYLVKKLEQTMPCDGQHMPRPFEVGTAPPLTA
                     DELATIRAWIAAGAPN"
     gene            complement(560..>1590)
                     /locus_tag="VLJ38_15555"
     CDS             complement(560..>1590)
                     /locus_tag="VLJ38_15555"
                     /inference="COORDINATES: protein motif:HMM:NF039585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5915 domain-containing protein"
                     /protein_id="HSU40993.1"
                     /translation="AFDASGASGRLRDFADVLTNWYVRLSRRRFWKSQDDADKADAYA
                     TLYEVLTTFARVVAPFMPFLSEFVYQRTVRPVDERAPASVHFTDFPAVRAERIDTALE
                     ARMLLVRRVVSLGRRLREEQKLKVRQPLARLTVVTRSEGARAAALATAALIREELNVK
                     TVETSLDEAAFCTLTLKPNFANLKGRAGPKLKEIGQGLASWGFDEVARLEAGETLPLA
                     GEAIGLSDVLLQRKPAPGRAVATEGDVTLVLDTALTPDLVLEGIAREFVSVLQQARKT
                     AGLEVSDRIGVLFDSEDAEVLAAIERHGAVIAEEVLALELRRDASAVASESINGRPVR
                     YAVSKRER"
BASE COUNT          220 a          585 c          559 g          226 t
ORIGIN      
        1 tcggggcggc gccggcagcg gtcggggcgg caccagcagc ggtcggggcg gcacgggtgc
       61 cgcgggcaaa gctggcgcgg gtggctcggc gactgccggc gcgggtggct cggcgaacgg
      121 cggcgctggc gcgggggcgc gcggcggcgc gggtggttcg ccgaacggcg gcgccaatca
      181 cggcggcgcg cccggcgcga cgctcgccgc cgtccaagcg atcttcgacg accgctgcgt
      241 caactgccac gacgcgagca agggggggct gccgacgtat cccatgttgc cgctcaccgc
      301 gggcgcttcg cacgccgcgc tcgtcaacgt cgccgccgac gaaacctgcg gcggcgtccg
      361 cgtcgtgccc ggcaatcccg acgcgagcta cctcgtgaag aagctcgagc aaacgatgcc
      421 ttgtgacggc cagcacatgc cgcgcccgtt cgaggtgggc acggccccgc cgctcacagc
      481 cgacgagctt gcgacgattc gcgcctggat cgccgcaggc gcgccgaact gacccgctcg
      541 gccgcgctca cctccgccgt cagcgctcgc gcttgctgac ggcgtaacgc acggggcgcc
      601 cgttgatgct ctcgctcgcc acggcgctcg cgtcgcgccg gagctcgagc gcgagcactt
      661 cttcggcgat cacggcgccg tgccgttcga tcgccgcgag cacctccgcg tcctcgctgt
      721 cgaacagcac gccgatgcga tcgctcacct cgagccccgc ggtcttgcgc gcctgctgca
      781 agacgctcac gaactcccgc gcgatcccct cgagcacgag gtccggcgtg agcgccgtgt
      841 cgagcacgag cgtcacgtcg ccttccgtcg cgacggcacg ccccggcgca ggcttacgct
      901 ggagcagcac gtccgaaagt ccaatcgcct cgcccgcgag cggcaaggtt tcgccggctt
      961 cgagccgcgc gacctcgtcg aagccccagc tcgcgaggcc ctgcccaatt tccttgagct
     1021 tcggcccggc gcgtcccttg aggttcgcga agttcggctt gagcgtgagc gtgcagaagg
     1081 cggcttcgtc gagcgacgtt tcgaccgtct ttacgttgag ctcttcgcgg atcagcgccg
     1141 ccgtggcgag cgcggcggcg cgggcgcctt cgctgcgcgt cacgaccgtg agacgcgcga
     1201 gcggctgtcg caccttgagc ttttgctcct cgcgcaggcg gcgaccgagc gaaaccacgc
     1261 gccgcacgag aagcatgcgg gcctcgagcg ccgtatcgat gcgttcggcg cgcaccgcgg
     1321 ggaaatccgt gaaatggacc gacgcgggcg cccgttcgtc cacgggccgc acggtgcgct
     1381 ggtagacgaa ctcgctcaaa aacggcatga agggcgcgac cacgcgcgcg aacgtcgtga
     1441 gcacttcgta gagcgtcgcg taggcgtccg ccttgtcggc gtcgtcctgg ctcttccaga
     1501 agcgccggcg cgagagccgc acgtaccagt tcgtgagcac gtccgcgaag tcccgcagcc
     1561 gcccgctcgc cccgctggcg tcgaacgcgt
//
LOCUS       DATIML010000899         2126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3081225, whole genome shotgun sequence.
ACCESSION   DATIML010000899 DATIML010000000
VERSION     DATIML010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3081225"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VLJ38_15560"
     CDS             <1..255
                     /locus_tag="VLJ38_15560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40994.1"
                     /translation="RIDGYFPRFGAQNSIRIPSFYALDVRVAKHFKFGESMGLELYLD
                     VQNVTNHENPEEIVYNFNYSQKSYITGLPILPVLGGKFTW"
     gene            252..1337
                     /locus_tag="VLJ38_15565"
     CDS             252..1337
                     /locus_tag="VLJ38_15565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU40995.1"
                     /translation="MKTGRDERFRIGALGSCVLGFSALACTPELPSGASIIDSPRVLA
                     VRSEPAEAAPKANSPTDMTWSALYVGPNGDEDASLLDWALCDERKPLATAGEISPACL
                     VPASNVLLDLGSGTSVSGTLPDDGCRLFGPNPPPPGPGEPAPRPTDPDSTGGFYQPLR
                     IAVPRASGYDYAVGLTRISCGLARVSSEQSSDYQARYRANENPTLSGVVASPGEGETP
                     LTADAATTASVKPGSHVVFRASWPDCPQTPSCGDGICGANEDKTNCAGDCALPHGCGG
                     SEPYVAFDLASRQVLDRREGMRLSWYATGGEFEHDRSGRTEEQASVPYADNAWTAPDH
                     AGDVRLWVVLRDDRGGVDWGAYFVHVE"
     gene            1427..>2126
                     /locus_tag="VLJ38_15570"
     CDS             1427..>2126
                     /locus_tag="VLJ38_15570"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU40996.1"
                     /translation="MTVPAQRSVAACLVAMGLFGCGHSENEWQTELQKYNRLLAMHQQ
                     TVNESEALKLELAKTIAQVEQLKTDLQKMGLNLETVNEELQQTGTQKEQLTKSVQDMQ
                     RALDEYKIRAAQLERIKQRFEEVRDKLKKLTDLGLKVEIRRNRMVIRLPGDVLFASGQ
                     DKLRPEGVKVLDAVAEVIRKDPQLAGRYFQVAGHTDTKPLAGGRFEDNWGLSLMRARQ
                     VLVYLIGPVDPKKGG"
BASE COUNT          388 a          701 c          699 g          338 t
ORIGIN      
        1 cgcatcgacg gctatttccc gcgcttcggc gcgcagaact cgatccgcat tccgtcgttt
       61 tacgcgctcg acgtgcgcgt cgcgaagcac ttcaagttcg gcgagtcgat gggactcgag
      121 ctctacctcg acgtgcagaa cgtcacgaac cacgaaaacc ccgaagaaat cgtgtataac
      181 ttcaactact cacaaaagtc gtacatcacg ggcttaccga ttcttccggt gctcggaggc
      241 aaattcacgt ggtgaagacc gggcgtgacg agcgcttccg aatcggcgcg ctcggctcgt
      301 gcgtcctcgg cttcagcgcg ctcgcttgca cgcccgagct gccgagcggc gcttcgatca
      361 tcgactcgcc gcgcgtgctc gcggttcgct ccgagccggc cgaggccgcg cccaaggcga
      421 attcgccgac ggacatgacg tggtcggcgc tctacgtcgg gccgaacggc gacgaagacg
      481 cgagcctgct cgattgggcg ctctgcgacg aacgcaagcc gctcgcgacg gccggcgaga
      541 tttcgcccgc gtgtctcgtg cccgcgagca atgtcctgct cgatctaggc tcgggcacca
      601 gcgtcagcgg cacgctgccc gacgacggtt gccgcttgtt cggcccgaac ccgccgccac
      661 ctggtcccgg cgaacccgcg ccgcgtccga ccgatcccga ttcgaccggc ggcttttatc
      721 agccgctgcg catcgcggtc ccacgagctt ccggctacga ttacgccgtc ggccttacgc
      781 gcatctcgtg tggactcgcg cgcgtgagct cggagcaatc gagcgactac caagcgcgct
      841 accgcgcgaa cgaaaacccg acgctctcgg gtgtcgtggc gtcgccgggc gagggcgaga
      901 cgccgctcac ggccgacgcg gcgacgacgg cgagcgtgaa gccggggagc cacgtcgtgt
      961 ttcgggcaag ctggccggat tgtccccaga cgccgagttg cggcgacggt atttgcggcg
     1021 ctaacgagga caagacgaac tgcgccggcg actgtgcgct gccgcacggt tgtggcggct
     1081 cggagccgta cgtcgcgttc gatctcgcga gccggcaggt cctcgatcgg cgcgaaggca
     1141 tgcgcctgtc gtggtacgcg acgggcggcg agttcgagca cgaccgctcg gggcggaccg
     1201 aggagcaagc gtccgtcccg tacgcggaca atgcgtggac ggcgccggac cacgcgggcg
     1261 acgtgcgact ctgggtcgtc ttgcgcgacg atcgcggcgg cgtcgattgg ggcgcctatt
     1321 tcgtccacgt cgaatagcgg ctccgcggcc cgcgagggcg catcaaatgc gaaccgcgcg
     1381 gttcgcgatc tttacatcgc gcgcgcgcta acgcagggtc ccgaacatga ccgttcccgc
     1441 gcagcgctcg gtcgcggcct gcctcgtcgc gatggggctc ttcggctgcg gccactccga
     1501 aaacgagtgg caaaccgagc ttcaaaaata caatcgcctg cttgcgatgc atcagcagac
     1561 ggtcaacgaa agcgaagcgc tcaagctcga gcttgccaag accatcgctc aagtcgagca
     1621 gctcaagacc gatctgcaga agatgggcct caatctggag acggtgaacg aggagctgca
     1681 gcagacgggc acgcaaaagg agcagctgac gaagagcgtg caagacatgc agcgcgccct
     1741 cgacgagtac aagatacgcg cggctcagct cgaacgcatc aagcagcgct tcgaggaagt
     1801 gcgcgacaag ctgaagaagc tcaccgacct cggcctcaag gtcgagatcc gacgcaatcg
     1861 catggtgatc cgtttgccgg gagacgtgct cttcgcctcg ggccaggaca agctccgccc
     1921 cgaaggtgtc aaggtgctcg acgcggtcgc cgaggtaatt cggaaagatc cgcagcttgc
     1981 tggacgctac ttccaggtcg cagggcacac ggacaccaag ccgctcgccg gcggccgttt
     2041 cgaagacaac tggggcctct cgctcatgcg ggcgcggcag gtgctcgtct acctgatcgg
     2101 gccggttgat cccaagaagg gcggcg
//
LOCUS       DATIML010000900         5305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3081252, whole genome shotgun sequence.
ACCESSION   DATIML010000900 DATIML010000000
VERSION     DATIML010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5305
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3081252"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="VLJ38_15575"
     CDS             complement(<1..898)
                     /locus_tag="VLJ38_15575"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSU40997.1"
                     /translation="MPFELRSPLGLALLGLLVPLVLLYVLRIQREPRRVSSLWLWRAA
                     ARDLLARQPFRRLVPHVSLMLEALALAALALAVARPLTRGGRIDAGHVALIIDASASM
                     SAVNAAGRSRLAEATDAARAAVHRLGPGADALVIEAGRDPRVVSPWEHDVHRLDAAIA
                     RVTGGDVEGDLGRALALASDHLRTRSGTRKVIVFTDGALADRDALRRSVYPLQLVRVG
                     EQADNAGIVRVDVGRTSGTAGKDQVSAFALVQNFGKRPSSSPSMPRRTTRAWASSSNF
                     PRATRYVPTIAPTSAFRRAAGCR"
     gene            complement(908..1582)
                     /locus_tag="VLJ38_15580"
     CDS             complement(908..1582)
                     /locus_tag="VLJ38_15580"
                     /inference="COORDINATES: protein motif:HMM:NF018866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 family protein"
                     /protein_id="HSU40998.1"
                     /translation="MHCSADIESETLRINRRYMVEVVEHFVLCPWAARSRLDGHVAEC
                     VFQQESSEDFTPSLARISELAARPAIEVALFIYPCVALGRLDFEHFARRLRALDHDRH
                     AVGRVPFAMAAFHPDAEPQLDDPERLIPFLRRTPYPTLQLVRTSALERVRGGEVEGTA
                     FLDLDVHGFPPRLEPAAVPLRERIARTNLKTVLAEGLETVRAAMEAIFRDRDETDARL
                     GRPKRA"
     gene            complement(1996..2886)
                     /locus_tag="VLJ38_15585"
     CDS             complement(1996..2886)
                     /locus_tag="VLJ38_15585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSU40999.1"
                     /translation="MTDALLAPEFLRELEILKRRMEIQARSGAAGEHMARRRGSSAEF
                     HEHRPYEPGDDLRRIDWLAFARSGQPVTKLFRAEEDTMVRIVLDASASLDFGTPSKLE
                     AARRVAAAVGYLALASGQRSELWVARVSSSGRLPFERTPPRRGRAGITAFLRDLSRVT
                     ASGSTDLGAAVRAVVEYAPRPGLIVLVSDFLDPGPVTSALALSRASGHDLALVQVLDA
                     AELEPDLEGDLALVDAESNQSLDVTADGAAIEAYLLRITGLIEELRAFARRNGATYVR
                     ALNDEPLLALVRRVVARSID"
     gene            complement(2883..4514)
                     /locus_tag="VLJ38_15590"
     CDS             complement(2883..4514)
                     /locus_tag="VLJ38_15590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU41000.1"
                     /translation="MSAQTGVASVPPSPASVRGLARARVGFSRLLADPNPVWMRELKA
                     AARLQRTPVVLAVTTGMMTLLVCSVGGIASIDAEPAKVGVWLYHTFFSLAFALVAWMG
                     PAMAATGIAAERSGGTWEALELTGLGAAAIARGKFLGALTYVTMYLVMLAPVGALPFL
                     FGGVTALEVVLAFVVLGGIAVLSVTFGLAMSSKFSSPALAILVTLLVSIPASIAAYAG
                     LGVGLSFAANSLWHGVAAGAPVWLPTAYARADFGIEYLTLLVLVPAVLVALPAWLFHE
                     ITVANMAAPSDDRSTRLRVWTLVAGPFMTVTCVVSGVALNDPSWFIAGEMGLVLTYLF
                     VGFLFAGEPLGPSRRVEARWQRERAGAGKRFLGPGVMRACTLLLLLVLGSFAALLAAA
                     ALTLRTPTDRDGVLALGAYAAAFLVFVAGFAAWTRARSRSNGVPRVILLGVLFLAFVG
                     PWIAMAIAGIFESSERALLVAAPSPLYAFHLRKVISSGTSDGEVAVLAGSVAAVSWAV
                     IGLGLFALASGRVEQRLAEERALRAGLEGPSGGAA"
     gene            complement(4511..>5305)
                     /locus_tag="VLJ38_15595"
     CDS             complement(4511..>5305)
                     /locus_tag="VLJ38_15595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU41001.1"
                     /translation="VREFLEFFADAYRIPELGVVDAVIELTDLTKLSDRLVATLSKGM
                     KQRLQIARTLLHDPKVLVLDEPASDLDPRARIEVRDLLLELRELGKTIFLSSHILTEL
                     SDVCTSVGILERGELVVAGPIGEIAERLALQRSNSARPAPTPSLGLEGTPGATDVPAG
                     ASGPAAPVVTPGGAPIPEATRKRLKLRVLGDSQAIVPMLQGGSGVLGVEAGPGGLLVL
                     YYVGGDQYVAEVVRYLVTSGVGVVSVEPERNELERIFLEVTKGDLS"
BASE COUNT          944 a         1759 c         1909 g          693 t
ORIGIN      
        1 accggcagcc ggctgctctc cggaacgcgg acgtaggcgc gatcgtcggc acgtagcgcg
       61 tcgcccgggg aaagttcgac gacgaggccc atgccctggt cgtgcgccga ggcatcgaag
      121 gtgaggacga cgggcgcttg ccgaagttct gaaccaaggc gaaggcgctg acctgatctt
      181 tgccggcggt acccgaggtg cgacccacat cgacgcgcac gatgccggcg ttgtccgcct
      241 gctcgcccac gcgcaccagc tgcagggggt agacggaacg gcgaagcgcg tcgcgatcgg
      301 cgagcgcgcc gtcggtgaag acgatgacct tccgggtccc cgagcgggtg cgcaggtggt
      361 cggaggcgag cgccaaggcg cggccgaggt ccccctcgac gtcgcccccg gtcacgcggg
      421 cgatggcggc gtcgagccgg tgcacgtcat gctcccaggg cgagacgacg cgcggatcgc
      481 gcccggcctc gatgacgagc gcgtccgccc cggggccgag gcggtgcacg gcggcccggg
      541 cggcgtctgt cgcttcagcg aggcgggaac gtccagccgc gttgaccgcg gacatggaag
      601 cgctcgcgtc gatgatgagc gccacgtgac cggcgtcgat gcgcccgccg cgcgtgagcg
      661 gccgcgcgac cgcgagcgcc agcgccgcca gcgcgagcgc ctcgagcatc agcgagacgt
      721 gcgggaccaa ccggcggaaa ggctgccgcg cgagcagatc gcgcgccgcc gcccgccaga
      781 gccagagcga actcactcgt ctcggctcac gctggatgcg gagcacgtaa aggaggacga
      841 gcggaacgag caggccgagt agcgcgaggc ctaatgggct ccggagctcg aacggcacct
      901 cgcgagctta cgcccgtttg gggcgtccga ggcgtgcgtc cgtctcgtca cggtcgcgga
      961 aaatggcttc catggccgcc ctcaccgttt ctagtccctc ggcgagcacc gtcttcaggt
     1021 tcgttctggc gatacgttca cggagcggca cggcggcggg ctcgaggcgc ggggggaaac
     1081 cgtgcacgtc gaggtccaaa aacgcggtgc cctcgacttc acccccccgc acgcgctcga
     1141 gcgccgaggt gcggacgagc tgtagggtgg ggtagggcgt gcgccggaga aacgggatca
     1201 gacgctccgg atcgtcgagc tggggttcgg cgtcggggtg gaacgcggcc atggcgaacg
     1261 gcacccgacc gacggcgtgg cggtcatggt cgagcgcgcg cagccggcgc gcgaagtgct
     1321 cgaagtcgag cctgccgagc gccacgcacg ggtagatgaa gagggcgacc tcgatcgcgg
     1381 gacgagcggc aagctcgctg atgcgcgcga gcgacggcgt gaaatcttcc gagctttcct
     1441 gctgaaaaac gcattcagcc acgtgcccgt cgagacgcga gcgcgccgcc cacggacaca
     1501 ggacgaagtg ctcgacgacc tcgaccatgt accggcggtt gatgcgcaag gtctcactct
     1561 cgatgtcggc ggagcagtgc acgcatgcga gcgtagccga tgtcgcgcgt gcgcttcacg
     1621 ctgtctcgcg ggtggtgatc gagtcgatgt cgcgcgtcga atgcgtgcgt gatgcttgac
     1681 gaagagaacg aagcaaggaa tcatgcgctc tcgtgaacgc tcgctcgagc gctcgctcaa
     1741 ccaaaacacc agaggatgga tatggctgcg aagaagaaga cggcccccgc gccgaagaag
     1801 cgacgtgcca agaaggcgaa agccgccccg gctatggcga tgccgaagaa ggcgaagaag
     1861 aagcgtcgca agaagaagtg agacgttgga gacgagcgcg ggcgccggtc acccaggtga
     1921 cgcgctcgcg ccgctcctct tcagaggggg gagtcgagag cgcttgagtg accggggagg
     1981 ggcgcgggga gagagtcagt cgatcgagcg cgcgaccacg cgccggacga gagcgagcaa
     2041 gggctcgtcg ttcagggcac ggacgtaggt tgcgccgttt cgccgcgcga aggcgcggag
     2101 ttcctcgatc aggccagtaa tccgcagtaa ataggcttcg atcgccgctc cgtcggccgt
     2161 gacgtcgagg ctctgattgc tctcggcatc gacgagcgcg aggtcgcctt cgagatccgg
     2221 ttcgagctcc gcggcgtcca agacctgcac gagggcgagg tcgtgtcccg aggcgcgcga
     2281 cagggcgagc gcgctagtaa ccggaccggg gtccaagaag tcactgacga ggacgatcag
     2341 gccggggcga ggagcgtact cgacgacggc acgaacggcc gctccgagat ccgtgctccc
     2401 gctcgctgtc acgcgcgaga ggtcgcgcaa aaatgccgtg atgcccgcgc gaccgcggcg
     2461 gggaggcgtg cgctcgaagg gcagacgccc cgagctgctc acccgcgcca cccagagctc
     2521 gctccgttgc ccactcgcga gggcgaggta gccgacggcc gccgcgaccc gacgcgcggc
     2581 ctcgagcttc gagggcgtgc cgaaatcgag cgacgccgac gcgtcgagca cgatgcgcac
     2641 catcgtgtct tcttccgcgc gaaagagttt agtcaccggt tgcccgctgc gtgcgaacgc
     2701 gagccagtca atgcgccgga ggtcgtcgcc gggttcgtac ggacggtgct cgtgaaactc
     2761 ggcgctcgac ccgcggcggc gcgccatgtg ctcgccggcg gctccggacc gcgcctgtat
     2821 ctccatgcga cgcttgagga tttcgagctc gcgtagaaac tccggagcga gcagggcgtc
     2881 ggtcatgccg cgccgccgct cggcccttcg agtcccgccc tgagcgcgcg ctcttcggcc
     2941 aggcgttgtt cgacgcgacc actcgcgagc gcgaacagcc cgagaccaat gacggcccag
     3001 gacaccgccg ccaccgagcc cgccaggacg gcgacctcgc cgtccgaggt accgctcgat
     3061 atgaccttgc gtaagtggaa cgcgtacagg ggcgagggcg cggcgaccag gagggcgcgt
     3121 tcactcgact cgaagatgcc ggcaatggcc atggcgatcc agggtccgac gaaagccaga
     3181 aacaagacgc cgagcaggat tacgcgcggc accccgttcg aacgtgaacg tgcccgcgtc
     3241 caggccgcga aacctgccac gaacacgagg aacgccgctg cgtaagcccc gagggcgagg
     3301 acgccgtcgc gatcagtcgg tgtgcggagg gtgagcgcgg cggctgcgag caaggccgcg
     3361 aacgagccca acacgagcag gagcaaaagt gtacaggcgc gcatgacacc ggggccgagg
     3421 aagcgcttgc ccgccccggc tcgctcgcgc tgccagcgcg cttccacgcg ccgtgagggt
     3481 ccgagcggct cgcccgcgaa cagaaagccg acgaacaggt acgtcagcac gaggcccatt
     3541 tcaccggcaa tgaaccagct cgggtcgttc agcgccacgc cgctcaccac gcacgtcacg
     3601 gtcatgaacg ggccggcgac gagggtccaa actcggagcc gcgtggaacg gtcgtcgctc
     3661 ggcgcggcca tgttcgcgac ggtgatctcg tgaaatagcc aggccggcag cgccacgagc
     3721 accgccggca cgagtacgag caaggtcagg tattcgatac cgaaatcggc gcgggcgtag
     3781 gcggtgggga gccacacggg cgctcccgcc gcaaccccgt gccagaggct gttggccgcg
     3841 aacgagagcc ccacgccgag cccggcatag gcggcaatcg acgccggaat cgagaccagc
     3901 agcgtcacca ggatcgcgag cgcagggctc gagaacttcg agctcatcgc caggccgaag
     3961 gtcacgctga gcacggcgat gccgccgagc acgacgaacg ccaggactac ctcgagcgcc
     4021 gtgacaccgc cgaacaggaa gggcagcgct cccaccggcg cgagcatcac gaggtacatc
     4081 gtgacgtaag tgagcgcgcc caagaatttg ccccgcgcga tggccgcggc gccaagtccg
     4141 gtgagctcga gtgcttccca ggtaccgccg ctgcgctccg cggcgatgcc cgtcgcggcc
     4201 atggcgggac ccatccaggc gacgagcgcg aacgcgagtg aaaagaacgt gtgatagagc
     4261 cagaccccga ccttggccgg ctcggcgtcg atcgaggcaa tgccgccgac ggagcagacg
     4321 aggagcgtca tcatcccggt cgtcacggcg agcacgaccg gcgtccgctg caggcgcgcg
     4381 gcggccttga gctcgcgcat ccagaccgga ttcgggtcgg cgaggagcct cgaaaacccg
     4441 acgcgcgccc gggcgaggcc gcggacgctc gccggcgaag gcggaaccga cgcgacgccc
     4501 gtttgcgcgc tcacgacaga tctcccttcg tgacctcgag gaagatgcgc tcgagctcgt
     4561 tgcgctcggg ttcgacgctc acgacgccca cgccgctcgt cacgaggtag cgcacgactt
     4621 ccgccacgta ctgatcgccg ccgacgtagt agagcacgag cagcccgccc ggccccgctt
     4681 ccacgccgag gacgccgctc ccgccctgga gcatggggac gatggcttgt gagtcgccga
     4741 gcacgcggag cttgagccgc ttgcgcgtcg cttcggggat gggggcgccg cccggtgtga
     4801 ccacgggtgc cgcggggccg ctcgctccgg cgggcacatc cgttgcgccc ggtgtccctt
     4861 cgagtccgag cgagggggtg ggcgccgggc gcgcgctgtt gctccgctgc agggcgagcc
     4921 gctcggcgat ttcgccgatt gggccggcca cgacgagctc gccacgttcg aggatgccca
     4981 cggaggtgca cacgtcgctc agctccgtga ggatgtggct cgacagaaag atggtcttgc
     5041 cgagctcgcg aagctcgagc aggaggtctc gtacctcgat gcgcgcccgc ggatcgagat
     5101 cgctcgccgg ttcgtcgagc acgagcactt tcgggtcgtg gagcaacgtc cgggcaattt
     5161 gcagccgctg cttcatgcct ttgctcaagg tggcgacgag ccgatcggag agcttcgtga
     5221 ggtcggtgag ctcgatcacg gcgtcgacca cgccaagctc ggggatgcgg taggcgtcgg
     5281 cgaagaactc gaggaactcg cgcac
//
LOCUS       DATIML010000901         1822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1929741, whole genome shotgun sequence.
ACCESSION   DATIML010000901 DATIML010000000
VERSION     DATIML010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1929741"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VLJ38_15600"
     CDS             <1..629
                     /locus_tag="VLJ38_15600"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSU41002.1"
                     /translation="VKKRVPVQGLQGHEDEAYFVLALPCPGSSDPEGADADLLGMVLA
                     NLTLSRSTRALRHDQGITYGVHASCEGHPGYGVFWIEFGVETEQADTALTAVLAEVER
                     LRDTPVSSSELARAKSRYLAGLAERLGTNRGTAGLLGQFYAQGLPPDELTRLTERVQA
                     ATAENLRTTAALFFNGRKGIAVSGSPGLLEPQLLRFGGGQWWTVRDDF"
     gene            complement(637..1281)
                     /locus_tag="VLJ38_15605"
     CDS             complement(637..1281)
                     /locus_tag="VLJ38_15605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41003.1"
                     /translation="MRDELVHALMPELRALVEHLVKTTVERSVASLFDRQRELEGKLE
                     RVATSLEKQRALPAAVERAATPSPDGRRELEAAVQSALAPLLDRQRGLETALSDLRRA
                     QSLPQDVRSIVAARAPEPATSLGSAAVAQAAPVTRPAPILPAVGAAPRAVPMQPLTAA
                     FTAAHDPNASWDIPAELNGSRRKRAVIWILAIAVILLLLSVAGLSVLSNTGRYL"
BASE COUNT          269 a          614 c          648 g          291 t
ORIGIN      
        1 acgtgaagaa gcgcgtgccc gtgcaaggtc tccaaggcca tgaagacgag gcttatttcg
       61 tgctggcgct gccctgcccg gggtcctcgg atcccgaggg tgccgatgcc gatctgctcg
      121 ggatggtgct cgccaacctg accctctcgc ggtcgacgcg cgcgctccgg cacgaccagg
      181 gcatcacgta cggcgtgcac gcgtcgtgcg aggggcatcc cggatacggc gtgttttgga
      241 tcgagttcgg ggtcgagacg gagcaggccg acacggccct cacagccgtg ctcgcggaag
      301 tcgagcggct gcgcgacacg ccggtctcgt cgagtgagct cgctcgcgcc aagagccgct
      361 atctcgccgg cctcgccgag cgcctgggca ccaaccgggg caccgcgggg ctactgggcc
      421 agttctacgc gcagggcttg ccccccgacg agctcacccg gctcaccgag cgcgtgcaag
      481 ccgcgactgc cgaaaacctg cgcaccacgg ccgccctgtt cttcaacggt cgcaagggca
      541 tcgccgtttc ggggtcgccc ggcttgctcg agccgcagct cttgcgtttc ggcggtggcc
      601 aatggtggac ggtacgcgac gatttttaga gccgcgttag agatatctgc cggtgttgct
      661 cagcacgctc agcccagcga cggagagcag gagcaggatc acggcgatcg cgagaatcca
      721 aatcacggcg cgcttgcgtc gcgagccatt gagctccgcg gggatgtccc acgaagcatt
      781 cgggtcgtgc gcggcggtga acgccgcggt gagcggctgc atggggacgg cgcgaggcgc
      841 cgcgccaacg gcgggtagga tgggcgcggg tcgcgtcacg ggagcagcct gcgcgacagc
      901 ggcgcttccg agcgaggtcg cgggctctgg cgcacgtgca gcgacgatgc tccgcacgtc
      961 ctggggaagg ctctgcgcgc gccgcaaatc ggagagcgcc gtttccaggc cacgttgtct
     1021 gtcgagcaac ggtgcgagcg cgctttggac cgctgcttcg agctcgcgtc gcccgtcggg
     1081 ggacggcgtg gccgcgcgtt cgaccgctgc agggagcgcg cgttgtttct cgagcgacgt
     1141 ggctacgcgt tcgagcttcc cttcaagctc gcgctgccgg tcgaatagcg aggcgacgga
     1201 gcgctcgacc gtcgtcttga ccaagtgctc caccagcgcg cgaagctcgg gcatgagggc
     1261 gtggacgagt tcgtcgcgca cggcgcgggc gttgtccgct gcgctccggc cctccgcgct
     1321 cgcaggcaat gcggcggggc ctggtcgcgg aatcgtgcct gcgggctcac gagcttcggg
     1381 accgcgcggt gcgttgaaga gcgacttggg cggcggccga ttgctcgttc gtcgcgtcga
     1441 tccaccgctc gcgcccgcgc tccgtgccga aggcgcgagc ggcgctcgcc gaggctgggc
     1501 gcccgtcccg tccgtgctca ccacctaagg atgcgcgatc gcacgaacac aatccagatt
     1561 gcgcggcgtt cgctgagtca agtcagtcgg tgcgccgcgc acctcgacac acccacgccg
     1621 tgccgacggc gagccgccca ccttgcgcga cggacccttg tcattcggct acgcagtggc
     1681 cgaaaccggg catcatcgca gcgtgatcgt cgaatccgcg gcgaagctgc gagcgaagta
     1741 gcgactgctt ggcaggctgc ccctcacttc atcgcgtgag agtcacagct tctcgacgag
     1801 cggcggcgac acgcgttcgg ct
//
LOCUS       DATIML010000902         5334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4817231, whole genome shotgun sequence.
ACCESSION   DATIML010000902 DATIML010000000
VERSION     DATIML010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5334
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4817231"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1673
                     /locus_tag="VLJ38_15610"
     CDS             <1..1673
                     /locus_tag="VLJ38_15610"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HSU41004.1"
                     /translation="IIGGGVNGTGVARDASLRGLKVALFERNDLAFGASGNSSGMIHG
                     GPRYLTTDPDVTYSSCLDSGHIQRIAPHLLFRIPFLAPVFGATELLAEATLATYDAFF
                     DVYDRYQPLKRGKPHVRLTGAEIATLEPGLAPGARGGVTFDEWGIDGARLCVANAVDA
                     IEHGAEVHVHSTVTELLRGDGGRVRGVRFRHRIDGTSGTRTARLVVNATGAWSPITAA
                     LGGLPKDAARVRPGKGIHIFLDRRLTNYAVMTNAIDGRQVFLMPWQNVSVLGTTDDDY
                     YGDLDRVVASGDEVRYLFEAVARVFPSIWQARAIGTWGGVRPTLYEWGPNEDELSREH
                     AVIDHAAHGAPGLYSMLGGKLASYRQFAEEMTDVLARELRVNVPCRTHVAPLPGGDEV
                     VDPMKLVVAGGMEAVTATRLEYRHGSRSLRVLERMQRDPREAAVICPCEPVTEAEVRY
                     TVAHELARTVEDVSRRTRLGLGVCGGLRCAARCGRIVAEMTDRSPRVGLQLAHGFLAG
                     AARRRAAAVGPDQARQEALGLAALRAEIGHPPWRPDPESEEAEHEAWR"
     gene            1674..2891
                     /locus_tag="VLJ38_15615"
     CDS             1674..2891
                     /locus_tag="VLJ38_15615"
                     /inference="COORDINATES: protein motif:HMM:NF013314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU41005.1"
                     /translation="MTAGRVVVIGAGMAGTAAAFAAARAGAAVVVVHDRAGASALYSG
                     ALDLVAWDAEVSAAVATRTQAALADAGLAAFLTALGVHRLGGTAPNGLIATASGVVRP
                     ALGADHALLELAPLAGRRVAVADVERDDWDAPLLAKTLGASDWAERTGTTFTPISVRL
                     LRTGYERRIAPYDFAELHDDPARGAALADALNAAGPDADAWLVGPWLGVEPDTVAAIR
                     SRARAPLGETTSPLAGAAGARFERARDRLFMQLGVEVRRGRVGRIAAHGAGWAVELAS
                     EVEGTPSELSAAAVVLATGGVGAGGVVFTWRLPGVVRGFELPFAAPVTLALDGEPAAG
                     GGSLYGPSLETKGLGVLERVGIACDALGRPVGNHDPQTGLFVAGDAVAGRPRTMLEAA
                     LAGLASGNVAARE"
     gene            2925..>5334
                     /gene="acnA"
                     /locus_tag="VLJ38_15620"
     CDS             2925..>5334
                     /gene="acnA"
                     /locus_tag="VLJ38_15620"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HSU41006.1"
                     /translation="MTDRALDSFQTRTDLAVGGKTYRYFSLPKLAAALGKDLSKLPFS
                     LRILLENLLRNEDGKAVVKRDIEAVANWDPKAEPDQEIAFYPARVVLQDFTGVPAVVD
                     FAAMRDAMAAMGGDPKRINPLFPAELVIDHSVQVDEYGTADALVRNTQNEYERNRERY
                     VLLRWAQKAFDNFRVVPPSTGIVHQVNLEYLSRVAFDAGDLVYPDTLVGTDSHTTMVN
                     GLGVLGWGVGGIEAEAAMLGQPINLLVPQVVGVRLYGTLPEGTTATDLVLTITRLLRD
                     RGVVSKFVEFYGDGLVGLPLADRATIGNMSPEFGSTCAIFPIDAETIAYLKLTGRSAE
                     RVALVEAYARAQGLYREKGAADPVFSENLELDLGSVVPTLAGPRRPHDKVALTDVKAA
                     FAKVLPEMAAAAKAKGKGAAPAVSASDLATSVHAELGGERFSLSHGSVVIAAITSCTN
                     TSNPYVLVAAGLVAKNAAARGLKSQPWVKTSLAPGSKVVTEYLRSSGLLNELEKLKFN
                     IVGYGCTTCIGNSGPLPDSISKAIADGQLVAVSVLSGNRNFEGRISPDVRANFLASPP
                     LVVAYALAGRIGIDFAKEPIGRGSDGKDVFLKDIWPSPRDVAAIVQQHVTAEAYAKEY
                     ADVFRGDDRWRALPVPEGARFAWEPESTYVRRPTFFDGIGKTPAPLTDIAGARALAVL
                     GDSVTTDHISPAGNIAKTSPAAAYLGEHGVNPRDFNQYGARRGNHEVMMRGTFANVRL
                     KNLLVPGVEGGVTRFLPTGEQMSIYDASMRYQAAKTPLVVLAGKEYGSGSSRDWAAKG
                     TFMLG"
BASE COUNT          781 a         1910 c         1849 g          794 t
ORIGIN      
        1 tcatcatcgg cggcggggtc aacgggaccg gcgtcgcgcg cgacgcttcg cttcgcggcc
       61 tgaaagtagc gttgttcgag cgaaacgatc tcgcgttcgg cgcgagcggc aactcgagcg
      121 gcatgatcca cggcgggccg cgctacctca cgaccgaccc ggacgtgacg tacagctctt
      181 gcctcgactc cgggcacatc cagcgcatcg cgccgcacct gctcttccgg attccgttcc
      241 tcgcgcccgt tttcggggcg accgagctcc tcgccgaggc gacactcgcc acctacgacg
      301 cgttcttcga cgtttacgat cgttatcaac cgctcaagcg cggcaagccg cacgtgcggc
      361 tcaccggcgc cgagatcgcg acgctcgagc cgggactagc gcccggagcg cgtggcggcg
      421 tcacgttcga tgaatggggc atcgacggcg cgcgcctctg cgtcgccaac gccgtcgacg
      481 ccatcgagca cggcgccgag gtccacgtgc actcgacggt caccgagctg ctccgcggcg
      541 acggcggtcg cgtgcgcggc gtgcgtttcc gtcaccgcat cgacggtacg agcggcacgc
      601 gcacggcgcg gctcgtcgtg aacgcgacgg gcgcctggtc tcccatcact gcggcgctcg
      661 gcggcctacc gaaggacgcc gcgcgcgtcc gtcccggcaa aggcatccac atttttctcg
      721 accgccggct caccaactac gccgtgatga cgaacgccat cgacggtcgc caggtcttcc
      781 tgatgccgtg gcaaaacgtg agcgtgctcg gcacgaccga cgacgactac tacggcgacc
      841 tcgaccgcgt ggtcgcgagc ggcgacgaag tccgctacct gttcgaagcc gtcgcgcgcg
      901 tcttcccgtc gatttggcaa gcccgcgcca tcggcacctg gggcggcgtg cgcccgacct
      961 tgtacgaatg gggcccgaac gaggacgagc tctcgcgcga gcacgcggtc atagaccacg
     1021 cggcgcacgg cgcgccgggc ctctactcga tgctcggcgg caagctcgcg agttaccgcc
     1081 aattcgccga ggagatgacg gacgtgctcg cgcgggagct ccgcgtcaac gtgccctgtc
     1141 gcacgcacgt cgcgccgtta cccggtggcg acgaagtcgt cgatccgatg aagctcgtcg
     1201 tggcgggcgg catggaagcc gtgacggcga cgcggctcga gtaccgacac ggcagccgct
     1261 cgctgcgcgt gctcgagcgc atgcagcgcg atccgcgcga agcggccgtg atttgcccct
     1321 gcgagcccgt caccgaggcc gaggtgcgct acacggtggc gcacgagctc gctcgcaccg
     1381 tcgaagacgt gtcgcggcgg acgcggctcg ggctcggcgt gtgcggcggc ctgcgctgcg
     1441 ccgcgcgctg cgggcgcatc gtcgcggaga tgacggaccg ctccccgcgc gtggggctac
     1501 agctcgcgca cggcttcttg gcaggcgccg ctcgccggcg cgccgcggcc gtgggccccg
     1561 atcaagcgcg ccaagaagcg cttgggctcg cggcgctgcg cgccgaaatc ggccacccgc
     1621 cgtggcggcc cgatccggag agcgaagagg ccgagcacga ggcctggcgt tagatgacgg
     1681 cgggtcgcgt ggtggtcatc ggtgccggca tggcgggcac cgcggcggcg tttgcggcgg
     1741 cacgcgccgg cgcggcggtc gtcgtggtcc acgaccgcgc cggcgcctcg gcgctctatt
     1801 cgggcgcgct cgatctcgtc gcctgggacg cggaggtctc ggccgccgtg gcgacgcgca
     1861 cgcaagcggc gctggccgac gcggggctcg ccgcgttcct cacggcactc ggggtccatc
     1921 ggctcggcgg aacggcgccg aacggcttaa tcgcgaccgc gagcggcgtc gtgcgccccg
     1981 cgctcggcgc cgatcacgcg ctactcgagc tcgcgccgct cgccggacgc cgcgtcgccg
     2041 tcgccgacgt cgagcgcgac gactgggacg cgccgctgct cgccaagacg ctcggcgctt
     2101 ccgattgggc cgaacgcacg ggcacgacgt tcacgcctat ttccgtgcgc ctgctccgca
     2161 ccggctacga gcgccgcatc gcgccttacg acttcgccga gctccacgac gatcccgcgc
     2221 gcggcgccgc gctcgccgac gcgctgaacg ccgccgggcc ggatgccgac gcctggctcg
     2281 taggaccctg gctcggcgtc gagccggaca ccgtggcggc catacgctcc cgagcgcgcg
     2341 cgccgctcgg tgagaccacc tcgccgctcg cgggcgcggc tggcgctcgc ttcgagcgtg
     2401 cgcgtgaccg actgttcatg cagctcggcg tcgaggtgcg gcgcggtcgc gtcggccgca
     2461 ttgcggcgca tggcgcgggc tgggcggtcg agcttgcttc cgaggtcgag gggacgccga
     2521 gcgagctcag cgcagcggcg gtcgtgctcg cgaccggcgg cgtgggcgcg ggcggcgtcg
     2581 tgttcacgtg gcgactgccg ggcgtcgtgc gcgggttcga gctgccgttc gcggcgccgg
     2641 tgacgctcgc gctcgacggc gagcccgccg ccggcggcgg ttcgctttat gggccgagtc
     2701 tcgaaacgaa gggtctcgga gtgctcgagc gcgtggggat agcctgcgac gcgctcggcc
     2761 gaccggtggg caaccatgac ccgcaaaccg gccttttcgt cgcgggcgac gccgtggctg
     2821 ggcggccccg cacgatgctc gaagccgcgc tcgcggggct cgcttcggga aacgttgctg
     2881 cgcgtgagtg acggcggtac gccgagcacg aaaggctttc gctcatgacc gaccgcgccc
     2941 tcgattcgtt ccagacccgc accgacctcg ccgtgggtgg caagacctac cgctacttca
     3001 gcctgccgaa gctcgcggcg gcactcggca aggatttgtc gaagcttccg ttctcgctgc
     3061 gcatcttgct cgagaacctg ctgcgtaacg aggacggcaa ggcggtcgtc aagcgcgata
     3121 tcgaagcggt cgcgaactgg gatccgaagg cggagccgga tcaagagatc gcgttttacc
     3181 cggcccgcgt ggtgctgcag gacttcacgg gcgtgcctgc cgtcgtcgat ttcgccgcca
     3241 tgcgcgacgc gatggccgcg atgggcggcg atcccaagcg catcaacccg ctctttcccg
     3301 ccgagctcgt gatcgaccac tccgtgcagg tggacgagta cgggaccgcc gacgcgctcg
     3361 tgcgcaacac gcagaacgag tacgagcgca accgcgaacg gtacgtcctg ctccgctggg
     3421 cacagaaggc gttcgacaac tttcgcgtcg tgccgccttc cacgggcatc gtgcaccagg
     3481 taaacctcga gtacctgtcg cgcgtcgcgt tcgacgcggg cgacctcgtc tatcccgaca
     3541 cgctcgtcgg caccgacagc cacacgacca tggtcaacgg cctcggcgtg ctcggctggg
     3601 gcgtgggcgg catcgaagcc gaagcggcga tgctcggcca gcccatcaac ctgctcgtgc
     3661 cgcaggtcgt cggcgtgcgc ctctacggca cgctgcccga gggcacgacc gcgaccgacc
     3721 tcgtgctcac gatcacgcgc ctcttgcgcg atcggggcgt ggtctccaag ttcgtcgaat
     3781 tttacgggga cggcctcgtg ggtctgccgc tcgccgatcg cgcgacgatc ggcaatatga
     3841 gcccggagtt cggctcgacc tgcgccatct tccccatcga cgcggagacg atcgcgtact
     3901 tgaagctcac gggccggagc gcggagcgcg tcgcgctcgt cgaagcgtac gccagggcgc
     3961 aggggctcta tcgggaaaag ggcgcggccg atccggtgtt cagcgagaac ctcgagctcg
     4021 atctcggctc cgtcgtcccg acgctggccg gaccgcgccg cccgcacgac aaggtggcgc
     4081 tgacggacgt gaaggcggca ttcgcgaagg tgctgcccga gatggccgcg gccgccaaag
     4141 cgaaaggtaa gggcgccgcg cccgccgtga gcgcgagcga tctcgcgacc tcggtgcacg
     4201 ccgagctcgg cggtgagcgc ttctcgctct cgcacggcag cgtcgtgatt gcggcgatca
     4261 cctcgtgcac caacacctcg aacccgtacg tgctcgtcgc cgcggggctg gtcgcgaaga
     4321 acgcggccgc gcgcggcctc aagtcccagc cctgggtcaa aacgagcctc gcccccggct
     4381 cgaaggtcgt caccgaatac ctgcgcagct cgggcctctt gaacgagctc gagaagctca
     4441 agttcaacat cgtcggttac ggctgcacga cgtgcatcgg caacagcggc cccttgcctg
     4501 acagcatcag caaggccatc gcggacgggc agctcgtcgc cgtgagcgtg ctcagcggca
     4561 accgaaactt cgaggggcgt atcagccccg acgtacgcgc caacttcctc gcatcgccgc
     4621 cgctcgtcgt cgcctacgcg ctcgcgggcc gcatcggcat cgacttcgcg aaggagccga
     4681 tcggccgcgg ttccgacggc aaggacgtgt tcttgaagga catctggccg tcgccacgcg
     4741 acgtcgcggc gatcgtccag cagcacgtca cggcggaggc gtacgccaaa gaatatgccg
     4801 acgtgttccg tggcgacgat cgctggcgcg cgctgccggt cccggaaggc gctcggttcg
     4861 cctgggagcc cgagagcacc tacgtccgcc ggccgacgtt cttcgacggc atcggcaaga
     4921 cgcccgcgcc gctcaccgac atcgcgggtg cgcgcgctct ggccgtgctc ggcgactccg
     4981 tcacgaccga ccacatctct cccgccggca acatcgccaa gacctcgccc gccgccgcgt
     5041 acctcggcga gcatggcgtc aacccgcgcg acttcaatca gtacggtgcg cgccgcggca
     5101 accacgaagt catgatgcgc ggcacgttcg ccaacgtgcg cttgaagaac ctgctcgtcc
     5161 ccggcgtcga aggtggcgtc acgcgctttt tgcccacggg cgagcagatg agcatctacg
     5221 acgcgtcgat gcgctaccaa gcggccaaga cgccgctcgt cgtgctcgct ggcaaggagt
     5281 acggctcggg ttcgtcccgc gactgggcgg ccaagggcac gttcatgctc ggca
//
LOCUS       DATIML010000903         2726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_772823, whole genome shotgun sequence.
ACCESSION   DATIML010000903 DATIML010000000
VERSION     DATIML010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772823"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1072
                     /locus_tag="VLJ38_15625"
     CDS             <1..1072
                     /locus_tag="VLJ38_15625"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU41007.1"
                     /translation="CELIKLDIQLPQQIETYLAELRRAGERAKDLVQQILTFSRRQPQ
                     QRRPMRLEQVVREALNLLRSTLPATIELDVRLAADAPVVLADPTLIHQVLMNLGTNAA
                     HAMGGGVGRLTVELDDAVLDETAARARPELLPGRYARLGVRDDGSGMDADTLKHVFEP
                     FFTTKGPGEGTGLGLAVVHGIVRDHEGAIFVESEPGRGTGVTVYLPEHAVELEGSSEP
                     SPELVRANGETVLFIDDEAVLCRSVSGLLERLGYRVTARSDPAEALALFRKKPDAFDV
                     VLTDLTMPGLTGVDVAREVLRVAPHKPVLLMSGYSSSWTAESVRTLGVIDLIAKPLGA
                     ARLSQSLAAALAKPNSVPSKAR"
     gene            1133..2467
                     /locus_tag="VLJ38_15630"
     CDS             1133..2467
                     /locus_tag="VLJ38_15630"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU41008.1"
                     /translation="MDKLLLVDDDAQMRNVLALYLRRAGFTVLDAATLAEARRLQQKQ
                     APDLTIVDYQLPDGTAFDLLTESRERDAGEAVIVLTGLGTIDLAVRAIKLGAEHFLTK
                     PVDLESLEVLVRRTLDLQRERRQRAVAAVGSSETPDPFLGTSAAIKNLAELATAALES
                     DVPVLILGETGSGKGILARWLHEHGTRKKEPFVDLNCAGLSRELAESELFGHQRGAFT
                     GAVNNKPGLIEVAHKGTLFLDELGDLELAVQPKLLTALEQGQFRRLGETATRVADVRL
                     IAATSRNLAGMVKEGRFREDLLFRINTLTFEIPPLRRRPGDVKPLAEAVLRDLCRRRG
                     RVAPALSEDVVDTLTRYSWPGNVRELRNVLERALLFCKGDLLDRTALRFDRSLEPDAD
                     AEPQTLDDAERRHIVNVLKQAGGKVEDAAKVLALSRSSLYAKLKKYGIRPSP"
     gene            complement(2516..>2726)
                     /locus_tag="VLJ38_15635"
     CDS             complement(2516..>2726)
                     /locus_tag="VLJ38_15635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41009.1"
                     /translation="LADAHVAARLVTLAARALQTSVLDAGALALGLPLFVDGGVVIGK
                     DTVVQAADIVLGHTRALLVLLERRR"
BASE COUNT          446 a          953 c          913 g          414 t
ORIGIN      
        1 ctgtgagctc atcaagctcg acatccagct cccgcagcag atcgagactt acctcgccga
       61 gctccgacgc gcgggcgagc gcgccaagga tctcgtccag caaatcctca ccttcagccg
      121 gcggcagccg cagcagcgcc gccccatgcg cctcgagcag gtcgtgcgcg aggcgctgaa
      181 tctcctgcgc tcgaccttgc ccgccaccat cgagctcgac gtgcggctcg ccgccgacgc
      241 ccctgtcgtc ctcgccgatc cgacgctgat ccaccaggtg ctcatgaacc tcggcacgaa
      301 cgccgcccac gcgatgggcg gcggcgtcgg gcgactcacg gtcgagctcg acgacgccgt
      361 gctcgacgag acggcggcgc gcgctcgtcc cgagctcctg cccggccgct acgcgcgcct
      421 cggcgtgcgc gacgacggct cgggcatgga cgccgacacg ctgaagcacg tgttcgagcc
      481 attttttacg accaagggtc cgggggaagg tacggggctc gggctcgcgg tcgtgcacgg
      541 catcgtgcgc gaccacgaag gcgcgatttt cgtcgagagt gaacccggcc gcggcacggg
      601 cgtcacggtg tatctgccgg agcacgcggt ggagctcgag ggctcgagcg agccgtcgcc
      661 ggagctcgtg cgcgccaacg gcgaaacggt gctgttcatc gacgacgagg cggtgctctg
      721 ccgctccgtc tccggactgc tcgaacggct cggctaccgc gtgacggcgc gcagcgatcc
      781 cgccgaggct ctggcgcttt tccgaaaaaa gcccgacgct ttcgacgtgg tgctcaccga
      841 tctcaccatg ccggggctga ccggggtaga cgtcgcccgc gaggtgctgc gcgtcgcgcc
      901 gcacaaaccc gtgctgttga tgagcggcta tagcagcagc tggaccgccg agtcggtgag
      961 aacgctcggc gtcatcgatc tcatcgccaa accgctcggc gccgcgcggc tgtcgcaaag
     1021 cctggccgcg gcgctcgcca agccgaactc cgtaccgtcg aaagcgcgct gagcggcgaa
     1081 tttctcgagc gaaatagaaa cttctcgggg cagcaataag ggttcgtgaa tcttggacaa
     1141 gctcttactg gtcgacgacg acgctcagat gcgaaacgtg ctcgcgctct acctgcgacg
     1201 cgcgggcttc acggtgctcg acgcggcgac gctcgccgag gcgcgtcgct tgcagcaaaa
     1261 gcaagcgccc gatctgacga tcgtggatta tcagctgccc gacggcacgg ccttcgatct
     1321 cttgaccgag tcgcgcgaac gcgacgcggg cgaggccgtg atcgtgctca cgggtctcgg
     1381 gaccatcgat ctggccgtcc gagcgatcaa gctcggggcc gagcacttct tgacgaagcc
     1441 cgtggacctc gagtcgctcg aagtgctcgt gcgtcgcacg ctcgatttgc agcgtgagcg
     1501 gcgccagcgc gccgtcgcgg ccgtcggctc gagcgagacg cccgatccgt ttctcggcac
     1561 gagcgccgcc atcaagaact tggccgagct cgcgaccgcc gcgctcgagt ccgacgtgcc
     1621 ggtcctcatc ctcggggaaa ccggctccgg caaagggatc ctcgcgcgtt ggctccacga
     1681 gcacggcacg cgcaaaaagg agccgttcgt cgatttgaat tgcgcggggc tttcgcgcga
     1741 gctcgccgag tcggagctct tcggacatca gcgcggcgct ttcacgggcg cggtcaacaa
     1801 caagcctggc ctcatcgagg tcgcgcacaa gggcacgctc ttcctcgacg agctcggcga
     1861 tctcgagctc gccgtccagc cgaagctcct gacggcgctc gagcaggggc agttccggcg
     1921 gctcggggag acggcgacgc gcgtcgccga cgtgcggctc atcgcggcta cgtcgcgcaa
     1981 cctcgcgggc atggtcaagg aagggcgctt ccgtgaggat ctcttgtttc gtatcaacac
     2041 gctgacgttc gagatcccgc cgctccggcg ccggccggga gacgtgaagc cgctcgccga
     2101 agcggtgctg cgcgatctgt gccggcggcg tggccgcgtg gcacccgcgc tctcggaaga
     2161 cgtcgtcgat acgctgacgc gttacagctg gcccgggaac gtacgcgagc tcaggaacgt
     2221 gctcgagcgt gccctgctct tttgcaaggg cgacctgctc gaccggacgg cgctgcgctt
     2281 cgatcgctcg ctcgagcccg acgccgacgc cgaaccgcaa acgctcgacg acgccgagcg
     2341 ccggcacatc gtgaacgtgc tcaaacaagc gggcggcaag gtcgaagacg cggccaaagt
     2401 gctcgccctc tcccggagct cgctctacgc caagctcaag aaatacggga tccgcccgag
     2461 cccctgagcg cttcgccggc gtgaacgcca gggccgcgcg tttcgcgcgc cgtcctcagc
     2521 gccgacgttc gagcaagacg agcagggcgc gcgtgtggcc gagcacgatg tcggccgcct
     2581 gaacgacggt gtccttgccg atgaccacgc cgccatcgac gaagagcggc aggccgagcg
     2641 caagcgcccc tgcgtcgagg acactcgttt gcagcgcgcg cgccgcgagc gtcacgagtc
     2701 gcgccgccac gtgcgcgtcg gcaagc
//
LOCUS       DATIML010000904         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3368097, whole genome shotgun sequence.
ACCESSION   DATIML010000904 DATIML010000000
VERSION     DATIML010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3368097"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..1622)
                     /locus_tag="VLJ38_15640"
     CDS             complement(48..1622)
                     /locus_tag="VLJ38_15640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU41010.1"
                     /translation="MASQAQDPEGTDAGAQSEARPSSRRPPSLTEFDHVRKERDLYRG
                     LLRLNLEGDPHAFLRDALELIVGVMSAAQGYLELFAPDDADVPWRYSFGFSERQADEV
                     RELVSRGIIAEAVASERVVFTPSALLDPRFRDRESVRRSRIDIVLCAPIGRDPPCGVV
                     YLQGGAGLAAPEANGWLTQFAEHLAPLRQHLVLRRQSQAGGELNALRKRLGAQTFQGR
                     SPALFGLLQEIEHLAPLEVGVLLTGETGTGKTEIARLIHANSPRASQAFIELNCAALP
                     DTLIENELFGSMPGAHSTAARRTEGKVAAAQGGTLLLDEIGDMSLPAQAKLLQLLQAK
                     EYYPLGASRPTKADVRVIAATHVDLQTAVQERRFREDLRYRLEVMTVRVPSLGERPED
                     KGLLATYFCERASKSHKLARIGFSPAAIRAVESAEWPGNVRQLAHVVESATIRAAAQR
                     AAQIEVHHLFPKTNSDAPTASPTRTFQEETRRFQADLVKRVLETNSWNVSAAARELDL
                     TRAHLYNLINAFGLKR"
     gene            complement(1711..>2115)
                     /locus_tag="VLJ38_15645"
     CDS             complement(1711..>2115)
                     /locus_tag="VLJ38_15645"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HSU41011.1"
                     /translation="IIASVVKDREVLWTDDRPPRALRRAIKPETAAELTRRMVQTVAN
                     GSAFKSFHDASGTSFLGEVTVAGKTGTLGDPDGSRLYTWFIGFAPVEAPEVAVSALVV
                     NNPSWQIKAPQLARDALRAYFARKGRKGVTAP"
BASE COUNT          321 a          704 c          732 g          358 t
ORIGIN      
        1 cgtcaactcg attggacggt cgccgccgcg agccgccgaa cgcccgttca gcgcttcagg
       61 ccgaacgcgt tgatgaggtt atagaggtgg gcgcgcgtca gatcgagctc gcgagccgct
      121 gcgctcacgt tccagctgtt ggtctcgagc acgcgcttga cgaggtcggc ttggaaacgg
      181 cgcgtctctt cctggaacgt acgtgtcggg gacgcggtgg gcgcatcact gttcgtctta
      241 gggaacaggt ggtgcacttc gatctgcgcg gcgcgctgcg cggcggcgcg aatggtcgcc
      301 gattcgacca cgtgcgcgag ctgccggacg ttgccgggcc actccgcgct ctccaccgcc
      361 cgaatcgcgg cgggcgagaa gccgatgcgc gccaatttgt gcgacttgct cgcgcgctcg
      421 cagaagtacg tggcgagcag gcccttgtcc tcgggccgct cgccgagcga gggcacgcgc
      481 accgtcatga cctcgagtcg gtagcgcaaa tcctcgcgga agcgccgctc ttgcacggcc
      541 gtttgcaaat cgacgtgcgt tgccgcgatc acgcgcacgt ccgctttggt cggccgcgac
      601 gcgccgagcg gatagtactc cttggcctgc aggagctgga gcaacttggc ctgcgccggc
      661 agcgacatgt cgccgatttc gtcgagcaag agcgtgccgc cctgcgcagc ggcgactttg
      721 ccttccgtgc ggcgcgccgc cgtcgagtgc gcgcccggca tcgagccgaa gagctcgttt
      781 tcgatcagcg tgtccggtag cgccgcgcag ttgagctcga tgaacgcctg cgaggcgcgc
      841 gggctgttgg cgtgaatcag tcgcgcgatc tcggttttac cggtgccggt ctcgcccgtg
      901 agcagcacgc cgacctcgag cggcgcgagg tgttcgatct cttgcaggag accgaagagc
      961 gcggggcttc tgccctggaa ggtttgcgcg cccaggcgtt ttctgagcgc gttgagctcg
     1021 ccgcccgctt ggctctgccg ccggagcacc aagtgctgcc gcagcggcgc gaggtgttcg
     1081 gcgaactgcg tgagccagcc attcgcttcg ggcgccgcga gcccggcgcc gccctgcagg
     1141 tagacgacgc cacacggcgg gtcgcgtccg atcggcgcgc acagcacgat gtcgatgcgc
     1201 gagcgccgga cgctttcacg atcgcggaag cgggggtcga gcagcgcgga cggcgtgaac
     1261 acgacgcgct cggaggcgac ggcttcggcg atgatgccgc gcgaaacgag ctcgcgcact
     1321 tcgtcggcct gacgctcgga gaagccgaac gaataacgcc agggcacgtc ggcgtcgtcg
     1381 ggcgcgaaaa gctcgaggta gccctgcgcc gcgctcatga cgccgacgat tagctcgagc
     1441 gcgtcgcgca agaacgcgtg cgggtcacct tcgagattga gacgcagcag gccgcggtag
     1501 aggtcgcgct ccttcctgac gtggtcgaac tccgtgagcg agggcggacg acggctcgac
     1561 ggccgcgctt cgctctgcgc gcctgcatcg gtaccttccg gatcctgcgc ttggctagcc
     1621 aaatgacctc ggagcttcga agctaacccc gaactcgacg caaatgcccg aacttcgcgg
     1681 gactccgcgg ataccttcgg gttttgcgcg ttacggcgcc gtgacgccct tccggccctt
     1741 gcgcgcgaag taggcgcgca gggcgtcccg ggcgagctgc ggcgccttga tctgccagct
     1801 cggattgttc acgacgagcg cgctcacggc gacttccggc gcctcgaccg gcgcgaagcc
     1861 gatgaaccac gtgtagaggc ggctgccgtc gggatcaccg agcgtccccg ttttgccagc
     1921 aaccgtcacc tcgccgagaa atgacgtccc cgacgcgtcg tgaaaactct tgaaagcgga
     1981 gccgttcgcg accgtctgca ccatcctgcg cgtgagctcg gcggccgtct cgggtttgat
     2041 ggcgcggcgg agcgctcgcg gcggtcggtc gtccgtccac aacacttcac gatccttgac
     2101 cactgacgcg atgat
//
LOCUS       DATIML010000905         8859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1061148, whole genome shotgun sequence.
ACCESSION   DATIML010000905 DATIML010000000
VERSION     DATIML010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8859
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1061148"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..970
                     /locus_tag="VLJ38_15650"
     CDS             <1..970
                     /locus_tag="VLJ38_15650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41012.1"
                     /translation="PSVAPASGRLVLVDRYPNSVLTWVDPATAAVLAQVSVGTGFASN
                     PHDYLELDGAKAYVSRYESNLHPGSEPNDAGGDLLILNTERYAIVGTVSLAQPDDGAF
                     LPHPARMLVVKGEAWVVLERFEQGYGDAGDGRIVGVSPDTDAVVWSVDLPGVANCGAL
                     VLDPAGERVAVVCSGVLGRAGAFEQSAVVLLDATVEPPVELARFAVGAELGASLSPTL
                     AWASDSLLLGATYGDLERGVFDLAYALDLTTGSARQLLDSGGAVVLGDTLCSPGCSDI
                     CFMADAQAAALRSWKVEGDEIAQGQDVAVDPGIGLPPRALGFLMAK"
     gene            1000..2247
                     /locus_tag="VLJ38_15655"
     CDS             1000..2247
                     /locus_tag="VLJ38_15655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41013.1"
                     /translation="MRRFVVLLALSAGCAPKPPAAAAPERVQSAPAVAGDAVALHGYV
                     GRSLIDAEMVATEAGFHGCYRELGTNLRVRLDGTLGAETAPRAAATEVPEPGEGEPHE
                     FDCRFESRSDIARLGGIVARCAALGDTSHGRTWSMNGAFYAVKDGASTPFYLGPASYP
                     SVPDELLLALAHAEAPPRACAPFLDVLDVKSLPGDRRAVLYARSFPCEADARNTGEER
                     AEPPLARLRLALVQKNDATHPRVVPLTVDDDADAVELHVYEFAGRDIFELERADAGVT
                     GGNGARSIDTRRSLFALTQSGRAGPLLELPEVRSLEGCDASDTVSLASAELDGDAPPE
                     LVLASDHHAKPCDNGALPSEPVSSTYAAYAFDPELGRFAQLSVESGELARRELTALDE
                     VSEADDAWQAPRSEQPCSVPAAP"
     gene            2223..3608
                     /locus_tag="VLJ38_15660"
     CDS             2223..3608
                     /locus_tag="VLJ38_15660"
                     /inference="COORDINATES: protein motif:HMM:NF004788.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate carboxypeptidase"
                     /protein_id="HSU41014.1"
                     /translation="MQRSRRALIDVVALVTLGCHGVEPKNERSGVATSVSSPFAPAAS
                     VSVAPSASVAPSVPAPSASVTPWPLDDAALALARAHRAAYVRDLTTLVNTDSGTDDAE
                     GLARVAAFAERRLRELGAEVEVRPAPPSAGKLVRATFRGTGTRKLLLLAHLDTVFGKG
                     EAARRPFRIEGDRAFGPGVADDKGGVVLVLHALALLRERHFRGYGVLSVIFDPDEEKG
                     SPGSRELIRTLAAEQDAVLSFEPPDAERVIVATNGIALLELAVKGRASHAGSAPEQGR
                     NAALELAHQIVRLKDLGDVRQGTSVNFTVLRAGERLNIIPDQATATADMRYSDPSELS
                     RVEASARALVAEHLVPDTEVNVTVDARRPPFARNAASDRLAELARSVYLGLGRSLEPV
                     AMRYGTDAGFAFQAGRASPAVLEGLGIVGQGLHSPAEWANLESVVPRIYLSLELIEAI
                     SVGVDAAAPPR"
     gene            3817..5565
                     /locus_tag="VLJ38_15665"
     CDS             3817..5565
                     /locus_tag="VLJ38_15665"
                     /inference="COORDINATES: protein motif:HMM:NF014589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HSU41015.1"
                     /translation="MRELAFREERNLARVLGIHVGHDSNAALVVDGRIVACVLEERFV
                     RIKHYAGLPVQAIEYCLKEAKLTIDDIDEVAFTSKYTDGGSLAKIMNLEPPAPGVGRE
                     AMVGRVLDFFRDVYRTMRPHGPEVPPIYYPTFKSRRPLRVRNVEHHLAHAASAFYTSG
                     RRAPTLIFTADGIGDDVSLTVWRAEPPAKFEVLYREGASGSLGWFYGLVTEGLGWWVG
                     DGEGKTMGLAPYGSTKGVEGVLDEFCPRYEGGRLVKPHDFGKLAFWSESATTHWHFEE
                     AERIVALIEKHGREAIAAEAQRVLEREMTGIVRHFLTAERTRVACFAGGIMLNVKMNQ
                     RLWESGMFDEQYIFPESGDGGLAVGAALLGNAELGGDLGEPLRQIYWGPAYDDALIRD
                     LLEERHLAYTTTDDPARAAAERLAAGKIVGWFQGRMETGPRALGGRSILMDPSKAENK
                     DIINARVKFREAFRPFCPSMTPAAARELLDPRARPERYMITSFEVRPEARSRIPAVVH
                     ADGTARPQIVEEAINPLFFRLLREFGARTGTECLLNTSFNIKGEPIVCHPREAIRCFF
                     DTGLDSLVMGSFVLDK"
     gene            5609..6667
                     /locus_tag="VLJ38_15670"
     CDS             5609..6667
                     /locus_tag="VLJ38_15670"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU41016.1"
                     /translation="MKRLLVTGSSGLIGSEMSAYFARAGWSVHGADNNGRAAFFGPSG
                     DTRWNQRRLLAELPGFVHHELDIRDRAAVLELLAELKPHAIVHTAAQPSHDLAAQMPF
                     EDFDTNAVGTMNLLEAARRASPEAPFVHLSTNKVYGDAPNEIPLVELDARWDYARPED
                     RDGIDESMRIDRSKHSLFGASKVAADVMVQEYGRYFAMPTCCLRGGCLTGPNHSGVEL
                     HGFLSYLVKCCVSGTRYTVYGYKGKQVRDNIHSLDVARFADAFIANPRAGEVYNLGGG
                     RENSCSILEAFALAEQVCGKKMSYDYVDRNRVGDHICYISNLTKMKTHYPSFTLSKSL
                     TDIFVEIHRSWLERAGAS"
     gene            6674..7885
                     /locus_tag="VLJ38_15675"
     CDS             6674..7885
                     /locus_tag="VLJ38_15675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41017.1"
                     /translation="MSSGAERYKQLLFINEYPPSTQAGAPLIMRQLLRDYDPERLDVL
                     CSASFYRDVAPVVRDSFLACRHTPVRAFNTRLRPRRVFGPIEATLNCWRLRYIMELGR
                     RIARERRVEAVLTTSYGAEMPHAAFFLARELGLPFYYYEMDRLDSVFTCRAAERLITK
                     YRREFLHSVKKLWLVSPTMVREFERLYGVRGEFMHHFVDIDRYQRIARDASPLPSDRI
                     RLIYTGSINSMFLDTMRWFCEWLNRGLSIEGRPVELVIYSGYCPPGLEGPQVKYAGFV
                     DSEAVAGKLVEAHAAVVLVSFTGDRGVKEQIETSIYTKTVDYLAASRPVLVVAPPYAA
                     QIEHYGNVCSVVERLDYDAVAAALRRLLTDEAYVDDLRQKGLALVKAQHSRARIEQLF
                     LSNFRVSAAPD"
     gene            7939..>8859
                     /locus_tag="VLJ38_15680"
     CDS             7939..>8859
                     /locus_tag="VLJ38_15680"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU41018.1"
                     /translation="MNVRALYEEFPFPYQGNHGDLFAKYVAPAIGFEPASILDAGCGT
                     GNLALDAAARFPRAEITGVDFSEASLERARTLAREAKVKNLVFERHDLMEPFPAGRAA
                     GPHPFVMSVGCIHHTPDPVRCLHNLRGVVAEGGVFVLGVYGKHGRIETELRRGLVDHV
                     RQVTGKTNRELLELYREVAAEPVLAQNRLRKVPPLTARYLVQRGLERVRAKLGPQRTP
                     DAASATDVGEADQFLHPLVHNWTAKEWIGALESAGFRLDRFVPDAAGNGWCIPDNPVE
                     RLQDPQLKALLRAMAPRDLWEALDLFYRPVL"
BASE COUNT         1412 a         2997 c         2926 g         1524 t
ORIGIN      
        1 gccgtccgtg gctccggctt cgggccgcct cgtgctcgtc gaccgttacc cgaattcggt
       61 gctcacctgg gtggatcccg cgacagccgc ggtccttgcg caggtttcgg tcgggacggg
      121 cttcgcctcg aaccctcacg actacttgga gctcgacggg gcgaaggcgt acgtctcgcg
      181 ctacgagtcg aatttgcacc ccgggtcgga gccgaacgat gcgggcggcg atcttttgat
      241 tttgaatacc gaacgctatg cgatcgtggg cacggtttcg ctcgctcagc cggacgacgg
      301 cgctttcctg ccgcatcccg cgcgcatgct cgtggtgaag ggggaagctt gggtcgtgct
      361 cgaacgcttc gaacagggct acggcgacgc gggggacgga cggatcgtcg gtgtgtctcc
      421 ggacacggat gcggtggttt ggtcggtcga cttgccgggt gttgccaatt gtggagcgct
      481 cgtgctcgat cccgcggggg agcgcgtggc cgtcgtgtgc agcggggtgc tcgggcgagc
      541 cggcgcgttc gagcagagtg ccgtcgtgct gctcgacgcg acggtggagc cgcccgtcga
      601 gctcgctcgt tttgccgtgg gtgccgagct cggtgcgtcc ctgtcgccca cgctcgcgtg
      661 ggcgagcgac tcgctcctac tcggcgcgac ttatggcgac ctcgagcgcg gtgtcttcga
      721 tttagcgtat gcgctcgacc tgacgaccgg ctctgcgcgc cagctgctcg actcgggagg
      781 cgctgtcgtc ctcggggata cgctctgctc tcccgggtgc agcgacattt gcttcatggc
      841 agacgcccag gccgccgcgc tgcgcagctg gaaggtcgag ggcgacgaaa tcgctcaggg
      901 tcaggatgta gcggtcgatc ctggaatcgg cttgccgccg cgagcgttgg gctttctgat
      961 ggcaaagtga ccgtcgccga cccacgagct gcccgcgcca tgcggcgttt cgtcgtgctg
     1021 ctcgccctct cggcggggtg cgcgccgaaa ccgcctgccg ccgccgcgcc cgagcgcgtg
     1081 cagagcgcgc ctgccgtcgc gggcgacgcc gtcgcgttgc acggctatgt cggccgttcg
     1141 ctgatcgacg ccgagatggt cgcgaccgaa gcgggctttc acggctgcta tcgcgagctc
     1201 ggtacgaacc tgcgcgtccg cctcgacgga acgctcggcg cggagacggc gccgcgcgcg
     1261 gcagccaccg aggttcccga acccggcgag ggtgagccgc acgagttcga ctgccgcttc
     1321 gagtcacgtt cggatattgc ccggctcggt ggcatcgtcg cgcgctgtgc ggccctcggc
     1381 gacacctcgc acggccgcac ctggtcgatg aacggcgcct tttacgccgt gaaggacggc
     1441 gcctcgacgc cgttttacct cggtcccgcg tcgtatccga gcgtgccgga cgagctcctg
     1501 ctcgcgctcg ctcacgccga ggcgccgcca cgcgcgtgcg cgccgttcct cgacgtgctc
     1561 gacgtgaagt cgctgcccgg cgaccgccgc gccgtcctct acgcgcgaag cttcccctgc
     1621 gaagccgatg ctcggaacac cggtgaagag cgcgccgaac cgccgcttgc acgtctccgc
     1681 ctcgcgttgg tccagaaaaa tgacgccacc cacccccgcg tcgttccgct cacggtcgac
     1741 gacgacgcgg acgccgtcga gctgcacgtc tacgagttcg ccggccggga catcttcgag
     1801 ctcgagcgcg cggacgcggg ggtcaccggc ggcaatggcg cccgctccat cgacacgcgg
     1861 cggagcctgt tcgcgctgac tcagagcggt cgagccggcc cgctgctcga gctgccggag
     1921 gttcgaagtc tcgaaggctg cgacgcgagc gacacggtga gcctcgcgag cgcggagctc
     1981 gacggtgacg cgccgcccga gctcgtgctc gcgagcgatc accacgccaa gccctgcgac
     2041 aacggggcgc tgccgagcga gccagtgagc tcgacctacg cggcgtatgc cttcgatccg
     2101 gagctcggac gttttgcgca gctttcggtc gaatcgggcg aactcgcgcg gcgcgagctc
     2161 acggctctcg acgaggtttc ggaagcggac gacgcgtggc aagctccgcg ctcggagcaa
     2221 ccgtgcagcg ttcccgccgc gccctgatcg atgtcgtcgc gctcgtcacg ctcggttgtc
     2281 acggagtgga gccgaaaaac gagcgtagcg gcgtcgctac ctcggtgagc tcgccgtttg
     2341 ccccggcagc gtccgtatcc gtcgcgccca gcgcttcggt cgcgccgtcc gtgccggcgc
     2401 cgtccgcttc cgtgacgccc tggccgctcg acgacgccgc gctcgcgctc gcccgcgcgc
     2461 accgggctgc gtacgtacgc gacctcacga cgctcgtgaa cacggacagc ggaacggacg
     2521 acgccgaggg cctcgcccgc gtcgccgctt tcgccgagcg gcggttgcgc gagctcggcg
     2581 ccgaagtgga ggtacgaccc gcgccgccct cggccggcaa gctcgtgcgc gcgacgtttc
     2641 gcggcacggg cacgcgcaag ctcctgctgc tcgcacacct cgacaccgtg ttcggaaaag
     2701 gcgaggcggc gcggcggccc ttccgtatcg aaggcgaccg cgcgttcggt cccggcgtcg
     2761 ccgacgacaa aggcggcgtc gtgctcgtgc ttcacgcgct cgcgctgctc cgcgaacgcc
     2821 attttcgagg ttacggcgtc ctcagcgtca tcttcgatcc cgacgaagaa aagggctcgc
     2881 ccggttcgcg cgagctcatc cgcacgcttg cggccgagca ggacgccgtg ctctcgttcg
     2941 agccacccga cgccgagcgc gtgatcgtcg cgacgaacgg catcgcgctg ctcgagctcg
     3001 cggtgaaggg gcgcgcttca cacgccggct ccgcgcccga gcaaggccgc aacgccgcgc
     3061 tcgagctcgc gcatcagatc gtgcggctca aggatctcgg cgacgttcgc cagggcacga
     3121 gcgtcaactt caccgtgctc cgcgccggcg agcgcctcaa catcatcccc gaccaggcga
     3181 cggcgaccgc ggacatgcgt tattcggatc cgagcgagct ttcacgcgtg gaagcgagcg
     3241 cgcgcgcgct cgtggccgag cacctggtcc cggatacgga agtcaacgtc acggtcgacg
     3301 ctcgccgtcc gccgttcgcg cgcaacgcgg cgagtgaccg cctcgccgag ctcgctcgca
     3361 gcgtctatct cggactcggc cgttcgctcg agccagttgc gatgcgctac ggcacggatg
     3421 cgggcttcgc ctttcaggcg ggtcgcgcga gcccggccgt gctcgaagga ctcggtatcg
     3481 tggggcaagg cctgcactca cccgctgagt gggcgaatct cgagagcgtc gtgccgcgga
     3541 tctatctcag cttggaattg atcgaggcga tctctgtcgg ggtcgacgct gcagcgccgc
     3601 cgaggtgacg acgagcggaa cgtcggggcg ggcgtgccgg agctcaccag tcccagagca
     3661 agcaccgatg tctctgaatc cgatggtgcg ttagcccggc gcgagctcgc gccatatcgc
     3721 ctcacccgtt agcatcagcc gcaggacgcg caacctacgc gggcgcgaaa gagctcgttc
     3781 gagcggtgct cgacccattg acgagcagta gccgaggtga gagaactcgc tttccgagag
     3841 gaacgaaatt tggcgagagt cctgggcatt cacgttggac acgattcgaa tgcagcgctg
     3901 gtcgtggacg ggaggatcgt agcctgcgtt ctggaggagc gtttcgtccg catcaagcac
     3961 tacgcgggct tgccagtcca agccatcgag tactgcctca aggaagccaa gctcacgatt
     4021 gacgatatcg acgaggtggc gttcacctcg aagtacacgg acggcggctc gctcgcaaag
     4081 attatgaatc tcgagccccc cgcacccggt gtgggccgcg aagcgatggt cgggcgcgtg
     4141 ctcgacttct tccgcgacgt ttaccgcacg atgcggccgc atgggccgga agtgccaccc
     4201 atctactatc cgacgttcaa gtcgcgacgg cctttgcgcg tgcgcaatgt cgagcatcac
     4261 ctcgcgcatg cggcctcggc tttctatacg tcggggcgac gggcgccgac gctcattttc
     4321 accgcggacg gcatcggtga cgacgtgtcc ctcacggtgt ggcgcgccga gcctccggcg
     4381 aagttcgagg tcctgtatcg cgagggagcg tccgggtcgc tcgggtggtt ctacggactc
     4441 gtcaccgagg gtctcggctg gtgggtcggc gacggcgagg gcaagacgat gggactcgcg
     4501 ccctacggct cgacgaaggg cgtcgagggc gtgctcgacg aattctgtcc gcgctacgaa
     4561 gggggccggc tcgtcaaacc gcacgatttc ggcaagctcg cgttctggag cgagtccgcc
     4621 accacacact ggcatttcga ggaggcggag cgcatcgtcg cgctgatcga aaagcacggg
     4681 cgcgaagcga tcgccgccga ggcgcagcgt gtgctcgagc gcgagatgac cggcatcgtg
     4741 cgtcatttcc tcacggctga gcggacgcgc gtcgcgtgct tcgcgggcgg gatcatgctg
     4801 aacgtgaaga tgaaccagcg gctctgggag agcggcatgt tcgacgaaca gtacatcttc
     4861 ccggagtcgg gcgacggggg gctcgccgtc ggcgcggccc tgctcggcaa cgccgaactc
     4921 gggggcgacc tgggcgaacc gctacggcaa atctattggg gcccagccta cgacgacgcc
     4981 ctcattcgcg acctgctcga ggaacgacac ctcgcgtata cgacgaccga cgacccggct
     5041 cgcgccgccg ccgagcgcct cgccgccggc aagatcgtcg gctggttcca gggacgcatg
     5101 gagacggggc cacgcgcgct cggcggccgt tcgatcctca tggatccgag caaggccgag
     5161 aacaaggaca tcatcaacgc acgcgtgaag ttccgggaag cgttccgccc cttctgcccg
     5221 tcgatgacgc cggcagccgc gcgcgagttg ctcgatccgc gggcgcggcc cgaacgctac
     5281 atgatcacga gcttcgaggt acggccggag gcgcgctcgc gcattccggc ggtcgtgcac
     5341 gccgacggca ccgcgcgccc ccaaatcgta gaggaagcga tcaaccccct cttcttccgg
     5401 ttgctgcgcg agttcggcgc caggaccggc accgagtgtt tgctcaacac ctcgttcaac
     5461 atcaagggtg agcccatcgt gtgccatccg cgcgaggcga ttcgctgctt cttcgatacg
     5521 gggctcgatt cgctcgtgat gggctcgttc gtgctcgaca agtaaagcct cgcatctcgt
     5581 cgcccagaaa gccgtcaacg acactagcgt gaagcgtctc ctcgtaaccg gttcctccgg
     5641 gctgattggc tccgaaatga gcgcgtattt cgcgcgagca ggttggagcg tgcacggcgc
     5701 cgacaacaac gggcgcgcgg ctttcttcgg cccgagcggc gacacgcgtt ggaatcaacg
     5761 ccggttgctc gccgagctgc ccggcttcgt gcaccacgag ctcgacatcc gcgatcgtgc
     5821 ggccgtactc gagctcctcg ccgagctgaa gccgcacgcg atcgtgcaca cggccgccca
     5881 accgtcgcac gatctcgccg cgcagatgcc gttcgaggac ttcgacacca acgcggtcgg
     5941 cacgatgaac ctgctcgagg cggcgcggcg cgcctcaccc gaggcgccgt tcgttcacct
     6001 ctcgaccaac aaggtgtacg gcgacgcgcc caacgagatc ccgctcgtcg agctcgacgc
     6061 gcgttgggac tacgcacgcc ccgaagatcg cgacggcatc gacgagtcga tgcgcatcga
     6121 tcgctccaaa cattcgctgt tcggtgcatc caaagtcgcg gccgacgtca tggtgcaaga
     6181 atacggccgc tatttcgcga tgccgacgtg ctgcctgcgc ggcggctgcc tcacggggcc
     6241 gaaccattcc ggcgtcgagc tgcatggctt tctctcctac ctcgtgaagt gctgcgtcag
     6301 cggcacgcgc tacacggtgt acggctacaa gggcaaacag gtgcgcgaca acatccactc
     6361 gctggacgtc gcgcgcttcg ccgacgcgtt cattgccaat ccgcgcgcag gcgaggtgta
     6421 caacctcggc ggcgggcgtg aaaattcttg ttcgatcctg gaggcatttg cgctcgcaga
     6481 gcaggtttgc ggcaagaaga tgagctacga ctacgtcgat cgcaatcgcg tcggcgatca
     6541 tatttgctac atcagcaatc tgacgaaaat gaagactcac tatccgagct tcactctcag
     6601 caagtcactg acggacatct tcgtcgagat ccatcggagc tggctcgaac gcgcgggcgc
     6661 gagctgagcg ggcatgagca gcggcgcgga gcgctataag cagctcctct tcatcaacga
     6721 gtaccccccg agcacgcaag cgggggcgcc gctcatcatg cggcagctac tccgcgacta
     6781 cgatcccgag cgcctcgacg tgctctgctc cgcttcgttc tatcgcgacg tggctcccgt
     6841 cgtgcgcgat tcgttcttgg cgtgccggca tacccccgtg cgcgccttca acacgcggct
     6901 caggccgcgc agggtgttcg gacccatcga agcgacgctg aactgctggc ggctgcgtta
     6961 catcatggag ctcgggcgcc gcatcgcgcg cgaacgccgc gtggaagccg tgctcaccac
     7021 ctcgtatggc gccgaaatgc cgcacgcggc cttcttcctc gcgcgcgagc tcggcctgcc
     7081 cttctactac tacgagatgg atcggctcga ctccgtgttc acgtgccggg cggccgaacg
     7141 gctcatcacc aagtatcgcc gtgagttcct gcactccgtc aagaagctct ggctcgtgag
     7201 cccgacgatg gtgcgtgagt tcgagcggct ctacggcgtg cgcggtgagt tcatgcatca
     7261 tttcgtcgac atcgaccgct atcagcgcat cgcccgcgac gcgtccccgc tgccgagcga
     7321 tcgcattcga ctgatctaca cgggttcgat caactcgatg tttctcgaca cgatgcgctg
     7381 gttttgcgaa tggctgaacc gggggctcag catcgagggc cggcccgtcg agctcgtcat
     7441 ctactccggc tattgtccgc ccggactcga aggaccgcag gtaaagtacg ccggcttcgt
     7501 ggactccgaa gccgtcgccg gtaagttggt cgaggcacat gccgccgtgg tgctcgtgtc
     7561 tttcaccggc gaccgcgggg tgaaagaaca gatcgagacg agcatctaca cgaagaccgt
     7621 ggattacctc gcggccagcc ggcccgtcct ggtcgttgcg ccgccttacg ccgcgcagat
     7681 cgaacactac ggcaacgtct gctccgtcgt tgaacgcctt gactacgatg cggtcgcggc
     7741 tgcgctacgc cgcctgctga ccgatgaggc atacgtggac gacttgcgtc agaagggact
     7801 cgccttggtc aaggcgcaac actcccgtgc acgcatcgag cagctcttcc tctcgaactt
     7861 tcgcgtgagc gccgcgcccg actagcgcgt tacggaggtt cgcggtactg tgcgcgctgc
     7921 gccttgcctg aaaacgccat gaacgtcagg gccttgtacg aagagttccc cttcccctac
     7981 caagggaacc acggcgatct gttcgccaag tacgtcgcgc cggcaatcgg cttcgagccg
     8041 gcgagcatct tggacgccgg ctgcgggacg ggaaaccttg cgctcgacgc ggccgcgcgc
     8101 tttccacgcg ctgagattac gggtgtggac ttttcggaag cttcgctcga aagggcgcgg
     8161 accttggcgc gcgaggccaa ggtgaaaaac ctcgtgttcg agcggcacga tctgatggag
     8221 ccgtttccag cggggcgcgc cgccggccca cacccgttcg tgatgagcgt cgggtgcatt
     8281 caccacactc ccgacccggt tcggtgtctg cataacctgc gcggggtcgt cgcggagggc
     8341 ggcgtgttcg tgctcggcgt gtacggcaag cacggccgca tcgagaccga gctcaggcgc
     8401 ggtctcgtcg accacgtgcg acaggtgacg ggcaaaacca accgcgagtt gctcgagctc
     8461 tatcgcgagg tggccgctga gccggtactc gcacaaaatc ggctgcgcaa ggtgccgccg
     8521 ctcacggccc gttatctcgt ccagcgcggg ctcgaacgcg tccgcgccaa actcggaccg
     8581 cagcgcactc ctgacgccgc gagcgcgacc gatgtcggag aagccgatca gttcctgcat
     8641 ccgctcgtgc acaactggac agccaaggaa tggatcggag cgctcgagtc cgcgggcttc
     8701 cgcctggatc gcttcgttcc tgacgccgct ggcaacggct ggtgcattcc cgacaatccg
     8761 gtcgaacgcc tgcaggaccc gcagctcaaa gccttgctcc gggcgatggc gccgcgcgat
     8821 ctttgggaag ctctcgatct gttctaccgt ccggtcctg
//
LOCUS       DATIML010000906         4863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3943375, whole genome shotgun sequence.
ACCESSION   DATIML010000906 DATIML010000000
VERSION     DATIML010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4863
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3943375"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..1719)
                     /locus_tag="VLJ38_15685"
     CDS             complement(43..1719)
                     /locus_tag="VLJ38_15685"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSU41019.1"
                     /translation="MPTTQAELDHALVRLDAAAPRLAALPPRDRARLLRAVGRRFHEL
                     APRFSALDARAKGIDAGSPRAGEAALEGPIIILRYVNELAATFEGARVIAPSRVREER
                     GRTVVDALPLDAYDAVILRGFRAEVWLDRAVGPERVATLPGALTAREGEVSLVLGAGN
                     VASIGVVDALGQCFVEGRACMLKLSPVNDYLGPLLELAFAPLVKEGFMALAYGGADVG
                     AYLTAHPAIDAIHVTGSYETHDAIVWGADPAERRANKARGEPLCKKPVTSELGNVSPA
                     VVVPGDWTEQEIEHAAQSIAGSFTFNAGFNCNATKLVVTPRGSRVRERLLARLREILA
                     GLPERAAYYPGAVDKYAHFTTSGGHVEKLGVASPVSEMELPWALVTELEPGARPAVLE
                     QEPFCAVLSEVAIGGDDPLAFLAQVAPFLNERVWGTLNAMLLVPASVEADPSLSAALD
                     RAIFELRYGAVCVNVWPAVAYGVGTLPWGGHPSATLANVQSGLGFGHNSLLLEHVEKS
                     VLRGPLVQFPKPFWYPDHRTLDRLARHLVDFQAAPSPWRLARVAMAALRG"
     gene            1803..2951
                     /locus_tag="VLJ38_15690"
     CDS             1803..2951
                     /locus_tag="VLJ38_15690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41020.1"
                     /translation="MSDSQPPERAPEVPAMSDRPLSRPPGSGRDSSAHLQAALSASGR
                     AEASLSTLMRAIRDLSSGVSGAREANVQLMRELEAMSDLLGAANERQLALRNRVTLLE
                     QSLERAHVEAQRERAYILDQQDAFIVAMMDDHEQVIAELNREIEATRHRSSQRPLIAE
                     LAPARGSDDSGVQNELEEAKQTIEKLLGERDRARETLLKVQAQRDEAQAELVDLQRQR
                     SGQLRVGAVSSPNLRNAPTLPPPETARPASSPHSAPVPVIVSKGPLDDLSLDDTGPQA
                     FGSIRPRAPELAFSPRDLADRISPPPEELRAAVHSPSSASMQRVQLPKRSFTPPGPPP
                     SVPQPNSGSGVASQPSASTPRPGGYSMTNSVAPEHVTDAPHVSRAPRG"
     gene            2959..3807
                     /locus_tag="VLJ38_15695"
     CDS             2959..3807
                     /locus_tag="VLJ38_15695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41021.1"
                     /translation="MSTTLATSGGTRWPSAQTYRTALAVTLALASLYFAKLALPAALL
                     VFLSWLAAPLEPPRVKQRHRWALSVAAAAAFVSVPLFLVREAVPGLVQGGTGAASQRA
                     VSRLREFLFAEDAARRGARYDPDGDGIGSALLFGELTGEIGVRHGARLAPPLLERYPK
                     VESVHGGYGLEIGGFWFMICVPAVGGGFTSDPEARLDDEAAERHFVAYAWPSGRAPGL
                     ERAYFIDEHERILSAASDSELRFGAEHPPACDDALADATRDDWRPWRGKKPRASLPGD
                     APLAKH"
     gene            3822..>4863
                     /gene="dusB"
                     /locus_tag="VLJ38_15700"
     CDS             3822..>4863
                     /gene="dusB"
                     /locus_tag="VLJ38_15700"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HSU41022.1"
                     /translation="MDAIYKTPVNRDVPPARPGEVRPLALGKRLVVSPPVVLAPMAGV
                     TNYPFRSICRRFGAGLYVSEMITARPLVEGNQKTLKIADFGEGEEPRSLQLYGVDPYY
                     VGEAVRRLVGEGRVDHIDMNFGCPVRKVTSKGGGAAIPAKPRLLAGIVRAAVQAAGEV
                     PVTIKFRIGIDDQVITHLDAGHVGQEEGVVAVALHARTAAQLYDGQARWEAIAELKNA
                     LRIPVLGNGDIWEAEDALRMLRMTGCDGVVVGRGCLGRPWLFRDLAAVMSGREPENPP
                     KLGEIATIMREHATLLAAWIGETAAIRAFRRHSTWYTKGFRGSAALRDRAMHLSTLAE
                     LDDWLAMLDAEEP"
BASE COUNT          757 a         1726 c         1686 g          694 t
ORIGIN      
        1 cctgcccctg cctaatctgc ctgggcgcgc ggccccgcga gctcaaccgc gcagggcggc
       61 catcgcgacg cgtgcgagcc gccacggact cggggcagcc tggaaatcga cgaggtggcg
      121 agcgagacgg tcgagcgtgc ggtggtccgg ataccagaac ggcttcggga attggacgag
      181 gggaccacgc agcacggact tttcgacgtg ctcgagcaag agcgagttgt ggccgaagcc
      241 gaggccgctc tggacattgg cgagcgtcgc cgacgggtgc ccgccccatg gcagcgtgcc
      301 gaccccgtag gccaccgcag gccaaacgtt cacgcagact gcgccgtagc gcagctcgaa
      361 aatcgcgcgg tcgagcgccg ccgagagcga cggatcggct tcgaccgacg ccggcacgag
      421 cagcatcgcg ttcagtgtgc cccacacgcg ctcgttcaag aacggcgcga cttgggcgag
      481 gaacgcgagc gggtcgtcgc cgccaatcgc gacttccgag agcacggcgc aaaacggctc
      541 ctgctcgagc acggcggggc gcgctccggg ctcgagctcc gtcacgagcg cccagggcaa
      601 ctccatttcg ctcacggggg acgccacgcc gagcttttcg acgtgaccgc cgctcgtcgt
      661 gaagtgggcg tacttgtcga cggctccggg gtaatacgca gcgcgttcgg gcaaccccgc
      721 gaggatctca cgtagccgcg cgagcaggcg ctcgcgcacc cgcgacccac ggggcgtgac
      781 gacgagcttg gtcgcgttgc agttgaagcc cgcgttgaag gtgaacgatc cggcgatgct
      841 ctgcgccgcg tgctcgattt cctgctcggt ccagtcgccc ggaacgacca cggcggggct
      901 cacgttaccg agctcgctcg tcacgggctt tttgcagagc ggctcgccgc gagccttgtt
      961 ggcgcgtcgc tccgcgggat cggcgcccca cacgatcgca tcgtgcgttt cgtacgaacc
     1021 ggtgacgtga atggcgtcta tcgccgggtg cgccgtgagg tacgcgccga cgtcagcgcc
     1081 accataggcg agcgccataa agccctcttt cacgagcggc gcgaacgcga gctcgagcaa
     1141 gggaccgagg tagtcgttca cggggctcag cttgagcatg caagcgcgtc cctcgacgaa
     1201 gcattggccg agcgcgtcga cgacaccgat cgaagcgacg ttaccggcac cgagcacgag
     1261 tgaaacctcg ccttcgcgcg ccgtgagcgc gcccggcagc gtcgccacgc gctcgggccc
     1321 gaccgcgcgg tcgagccaca cctccgcgcg aaagccgcgc aggatgacgg cgtcgtacgc
     1381 atcgagcggc agcgcgtcca ccaccgtgcg tccccgctcc tcccgcacgc ggctcggagc
     1441 aatcaccctc gccccttcga acgtcgccgc gagctcgttc acgtagcgca aaatgatgat
     1501 cggcccctcg agggcggcct cgcccgcgcg cggactgccg gcgtcgatac ctttggcccg
     1561 cgcgtcgagc gcgctaaatc gcggcgctag ctcgtgaaag cgacggccga cggcgcgcag
     1621 caagcgggct cggtcgcggg ggggtagcgc ggcgaggcgc ggggcggcgg cgtcgaggcg
     1681 gaccagggcg tggtcgagct cggcctgggt cgtgggcacc gattttgagc caattcctcg
     1741 ggccatggcc ggaccgaatt gcgtgccgcg gtcggcggtg cgaagcgtta aggcagggta
     1801 gcatgtccga ctcccagccc cccgagcgcg cccccgaggt cccagccatg agcgatcggc
     1861 ccctcagccg cccgcccggg tccgggcgtg acagcagcgc tcacctgcag gcggcgctct
     1921 ccgcgagcgg gcgcgccgag gccagcctca gcacgctgat gcgggcgatt cgggacctga
     1981 gctcgggcgt gagcggcgcg cgcgaggcga acgtccagct catgcgcgag ctcgaagcga
     2041 tgtcggatct gctcggcgcc gccaacgagc gccagctggc gctcagaaac cgcgtgacgt
     2101 tgctcgagca gtcgctcgaa cgcgcccacg tcgaagccca gcgcgagcgg gcgtacattc
     2161 tcgaccagca ggacgccttc atcgtggcga tgatggatga ccacgagcag gtgatcgccg
     2221 agctcaaccg tgaaatcgag gccacccgtc accgctcgag ccagcggccc ctcatcgccg
     2281 agctcgcccc ggcccgcggc agcgacgact ccggcgttca gaacgagctc gaggaagcga
     2341 agcagacgat cgagaagctc ttgggcgagc gcgaccgcgc gcgcgagacg ctcctcaaag
     2401 ttcaagcgca acgggacgaa gcacaagccg agctcgtgga tttgcagcgc caaaggagcg
     2461 gacagctgcg cgtcggcgcg gtctcttcgc cgaacctgcg caacgcgccc acgctgccgc
     2521 cgcccgagac ggcccgtccc gcttcgtcgc cgcactcagc gcccgtcccc gtgatcgtgt
     2581 cgaagggccc gctcgacgac ctgtcgctcg acgacaccgg accgcaggca ttcggctcga
     2641 ttcggccacg tgcccccgag ctcgcgtttt cgccgcgcga cctcgccgat cgcatctcgc
     2701 ccccgcccga ggagctgcgc gcggccgtgc attcgccaag ctccgcctcg atgcaacgag
     2761 tgcagctgcc gaaacggagc ttcacgccgc ccggccctcc gccgagcgtg ccgcagccga
     2821 attcgggtag cggcgtcgcc tcgcagccga gcgcctcgac accgcggccc ggcggctatt
     2881 ccatgacgaa cagcgtcgca cccgagcacg tcacggacgc gccgcacgtc tcgcgcgctc
     2941 cgcgcggctg agctccccgt gtcaaccacc ctcgccactt ccggcggcac gcgctggccg
     3001 tcggcacaaa cctatcgcac ggcgctcgcc gtcacgctcg cgctcgcttc gctctacttc
     3061 gcgaagctcg cgctgccggc cgcgctactc gtcttcttga gctggctcgc ggcgccgctc
     3121 gaaccgccgc gcgtgaagca gcggcatcgc tgggcgctct ccgtcgcggc ggcagcggcg
     3181 ttcgtgtcgg tcccgctctt tctcgtccgc gaggccgtgc cggggctcgt gcaaggcggc
     3241 acgggcgcgg cgagccaacg cgcggtgtcg cggttgcgcg aattcttgtt cgcggaagat
     3301 gccgcgcgcc gcggagcgcg ttacgacccc gacggggacg gcatcggctc ggcgctgcta
     3361 ttcggcgagc tcacggggga gatcggcgtc cgtcacggcg cgcgcctcgc cccgccgctg
     3421 ctcgagcgct atcccaaggt cgagagcgtg cacggcggat atgggctcga aatcgggggg
     3481 ttttggttca tgatctgtgt gccggccgtg ggcggcggct tcacgagcga tccggaggct
     3541 cggctcgacg acgaggcggc cgagcgccac ttcgtcgcgt acgcgtggcc gtcgggacgc
     3601 gcgccgggcc tcgagcgcgc gtatttcatc gacgagcacg agcgcatcct gagcgcggcg
     3661 tcggacagcg agctccgttt cggggccgag cacccgccgg cctgcgacga tgcgctggcg
     3721 gacgctacgc gcgacgattg gcggccctgg cgcggcaaga agccgcgcgc gagcttgccc
     3781 ggagacgccc cgctcgctaa gcactgagcc gaggcgcgcg cgtggacgcc atttacaaga
     3841 ctcccgtcaa tcgcgacgtg ccgccggctc gacccggtga ggtgcggcct ctggcgctcg
     3901 gcaagcggct cgtcgtctcg ccacccgtgg tgctcgcccc gatggcgggc gtcacgaatt
     3961 atcccttccg ctcgatctgc cggcgcttcg gcgcggggct ctacgtgagc gagatgatca
     4021 cggcgcgccc gctcgtcgaa ggcaatcaga agacgctcaa aatcgccgac ttcggcgaag
     4081 gtgaagagcc gcgcagcttg cagctttacg gcgtcgatcc gtattacgtc ggcgaagccg
     4141 tgcggcgcct ggtcggcgaa ggccgcgtcg atcacatcga catgaacttc ggctgcccgg
     4201 tacgcaaggt cacctcgaag ggcgggggcg cggcgattcc cgccaagccg cggctcctcg
     4261 ccggcatcgt gcgcgcggca gtgcaggcgg cgggcgaagt gcccgtcacg atcaaatttc
     4321 gcatcgggat cgacgaccag gtcatcacgc acctcgatgc cgggcatgtc ggacaagagg
     4381 agggtgtcgt ggccgtggcc ctccacgcgc gcactgccgc acagctttac gacgggcaag
     4441 cacgctggga agcaattgcc gagctcaaaa acgcgctccg catccccgtg ctcggtaacg
     4501 gcgacatctg ggaggcggag gacgcgcttc gcatgctgcg catgaccggc tgcgacggcg
     4561 tcgtggtcgg gcgcggctgc ctcggccgcc cctggttgtt tcgcgacctg gcggccgtca
     4621 tgagcgggcg cgagccggaa aatccgccga aactcggcga aattgcgacg atcatgcgag
     4681 agcatgcgac cttgctcgca gcgtggatcg gcgagacggc ggccattcgc gcgttccgcc
     4741 gccacagcac ctggtacacc aagggcttcc ggggcagcgc tgcgttgcgc gaccgggcga
     4801 tgcacctgag cacgctcgcc gagctcgacg attggctcgc gatgctcgac gccgaggagc
     4861 cct
//
LOCUS       DATIML010000907         3342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4235847, whole genome shotgun sequence.
ACCESSION   DATIML010000907 DATIML010000000
VERSION     DATIML010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4235847"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..1051)
                     /locus_tag="VLJ38_15705"
     CDS             complement(53..1051)
                     /locus_tag="VLJ38_15705"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSU41023.1"
                     /translation="MVPLSILDLAPITRGSDAGVALRRSLDLAQHAEGWGYTRFWLAE
                     HHNMPGVASAATAVALGFVAQGTERIRIGAGGIMLPNHAPLVIAEQFGTLAALYPGRV
                     DLGLGRAPGTDQLTLRALRRQQQASDAFPENVVELMRYLDPPAEGQAIRAVPGAGTRV
                     PVWLLGSSLYSAQLAAALGLPFAFAAHFAPDLLHEALDVYRSQFRPSPEHAVPHTMAC
                     INVYAAETDAEARRLLTSLEQAFVALRTGRPTELPPPIDAEARRAFEPALSDMLAQLL
                     RYAVVGGPEAVRRGVTEFVAATGVDELMTTAMIFDHAARLRSFEILATVFGLVHGG"
     gene            complement(1117..2064)
                     /locus_tag="VLJ38_15710"
     CDS             complement(1117..2064)
                     /locus_tag="VLJ38_15710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41024.1"
                     /translation="MSDTIRVTASLRIERPADVVGQQYRDIDHHIRNNVHPDIQYAWE
                     PAPEGQRKIRTTFHVLGVPQFDISELEDRTDGSFVIRCVEGTNAGMVLVHRFLPLGPN
                     ATQVELVEDAPTTLARKILGPLFVAGARQVLRKALFEDKRDLEQNAFAAGKAAGNLEY
                     ALAFMRRAEGSAASFVLPLAERGLAAKRAVLDATCLLAVADGKVEAGELDAVGRLAQI
                     IGASDERPWLEQRARELSALASTPAIVAEATRIGRALVAEGVAFDGITAAVVIALVSE
                     GMSLGELELLRELARVAGIADGSLPAVVERAERALMTPA"
     gene            2343..2855
                     /locus_tag="VLJ38_15715"
     CDS             2343..2855
                     /locus_tag="VLJ38_15715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41025.1"
                     /translation="MFPAAEPTSFCSRPTPVVPANPELCDKDESAHEHATERPAARPS
                     APPGSISDRPTFVPDDYMEPRRESPPCVTIQEETARDEPLEPASLVETPLLARRLPPP
                     LPVPAPAAAARALTLPPSTRHRRVLFARVLFVVLFGAVTSLLSFAFRPELAHAFGRFH
                     GGAVSATGVK"
     gene            2928..>3342
                     /locus_tag="VLJ38_15720"
     CDS             2928..>3342
                     /locus_tag="VLJ38_15720"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSU41026.1"
                     /translation="MVTYMGMLDLAQLEPERRRPITRAEYHAMGEAGLFENEHVELLD
                     GVIVKMSPRSLDHDSIIERLTERLLPPLVGRARVRIQLAFVASPYSEPEPDVAIVPKD
                     EPRLDHPGHAALLIEVALTSLRFDRSTKASIYARAG"
BASE COUNT          559 a         1159 c         1119 g          505 t
ORIGIN      
        1 cgcgaaggcg tgacgacgcg caactcggtg aacggcggcc tggacgaagc gttcagccgc
       61 cgtgcacgag tccgaacacc gtggcgagga tctcgaacga ccgaagccgc gccgcatggt
      121 cgaagatcat ggccgtcgtc atgagttcgt cgacgcccgt cgccgccacg aactccgtga
      181 cgcctcgacg cacggcctcg gggcccccaa caacggcgta gcgcaagagc tgagcgagca
      241 tgtcgctgag cgcaggctcg aaggcccggc gtgcctcggc gtcgatgggc ggcggcagct
      301 ccgtggggcg accggtacgt agcgccacga acgcttgctc gagcgaggtg agcagccggc
      361 gcgcctccgc gtccgtttca gcggcgtaca cgttgatgca cgccatggtg tgcggcactg
      421 cgtgctcggg cgacggccga aactgcgaac ggtaaacgtc gagcgcttcg tgcagtaaat
      481 cgggcgcaaa atgcgcggca aacgcgaacg gcaagccgag cgccgccgcg agctgtgcgc
      541 tgtacaggct cgacccgagc agccacacgg gcacgcgagt tccggcaccg ggcacggcgc
      601 gaatggcctg tccctccgcg ggcgggtcga gatagcgcat gagctccacg acgttctcgg
      661 gaaatgcgtc gcttgcctgc tgttgacgcc ggagcgcgcg cagcgtcagc tggtcggtgc
      721 cgggcgcgcg tccgagcccc aaatcgactc ttccgggata cagcgccgcg agcgtgccga
      781 actgctcggc gatgacgagc ggagcgtgat tcggcagcat gatgccgccc gcgccgatgc
      841 ggatgcgctc ggtgccttgt gccacgaaac cgagcgcgac ggccgtggcc gcgctcgcca
      901 cgccgggcat gttgtggtgc tcggcgagcc agaaacgcgt gtagccccag ccttcggcgt
      961 gctgggccag atccaaggag cgccgcagtg ccacaccggc gtcgctaccg cgcgtgatgg
     1021 gcgccagatc gaggatcgag agcggaacca tgcgaaagct atggggcggc ccgcggctgt
     1081 tcgcaaccgg ccgcggaggc tttgcgctcg actgcttcag gccggcgtca tgagcgcacg
     1141 ttcggcgcgc tcgaccacgg caggtagcga gccgtccgcg atgccggcga cgcgcgcgag
     1201 ctcgcgcaag agctcgagct caccgagtga catgccttca ctcacgagcg cgatgaccac
     1261 cgccgccgtg atgccgtcga acgcgacacc ctcggctacg agggcgcgcc cgatccgcgt
     1321 cgcctccgcc acgatcgccg gcgtgctcgc gagggcagag agctcacgcg cccgctgctc
     1381 gagccagggc cgttcgtcgg acgcgccgat gatctgtgcg agccgaccga cggcgtcgag
     1441 ttcaccggcc tcgactttac cgtccgcgac ggcgagcagg cacgtggcgt cgagcacggc
     1501 gcgcttggcc gcgaggccgc gctcggcgag cggaagaacg aacgacgccg cactgccttc
     1561 cgcccggcgc atgaacgcaa gtgcatactc gagattgccg gctgctttgc cggcggcaaa
     1621 cgcgttctgc tcgaggtcac gtttgtcctc gaagagcgcc ttgcgcagta cctgccgcgc
     1681 gcccgcaacg aacagtggtc ccaggatttt gcgggcgagc gtcgtcggcg cgtcctctac
     1741 gagctcgacc tgtgtcgcgt tcggaccgag cggcaggaac cgatgcacga gtaccatacc
     1801 ggcgttcgtg ccttcgacgc agcgaatcac gaacgagccg tccgtgcggt cttcgagctc
     1861 cgatatatcg aactgcggca cgccgagcac atgaaaagtc gtgcggatct tgcgctgccc
     1921 ttcgggcgcg ggctcccaag cgtactgaat gtccgggtgg acgttgttcc tgatgtgatg
     1981 atcgatgtcg cggtactgct gcccgacgac gtcggcgggc cgctcgatac ggagggacgc
     2041 agtaacgcga atcgtgtcgg acatctggat tcctcccggc gacggcgcat agcgttgcgc
     2101 atttcctacg cgagcgctag cgagcgtctc gggcggcacg tgtagccaga gctcggcgtg
     2161 ctccggacat gccccgcgca gcgtccacac caggctcggt cttcgcccac gacgaagcgc
     2221 gctgccgcgt gtccaaagct cataaaacgg tcgggcgcga accacacacc gggtattgtc
     2281 gagaaaccgg ggagtgcatg ccacgcaatc agctagaagt ccgaccggag gcgccgcact
     2341 ccatgttccc cgcggcagaa ccgacctcgt tttgctcgcg cccgacgccc gtcgtgccgg
     2401 caaatcccga gctttgcgat aaggacgaga gcgcgcacga gcacgccacc gagcgtccgg
     2461 cggcccggcc gtcggctccg cccggcagca tctccgatcg gccgacgttc gtgcccgacg
     2521 actacatgga gccgcggcgc gagagtccac cgtgcgtgac gatccaagag gagaccgcgc
     2581 gtgacgagcc gctcgagcca gcgtctctgg tcgagactcc tctgcttgcc cgccgcctgc
     2641 cgccgcccct ccccgtgccg gcgccagcag cagccgcgcg cgccctcacg ctgccgccga
     2701 gcacccgcca ccgacgcgtg ctctttgcgc gcgtgctgtt cgtcgtgctc ttcggagcag
     2761 tcacttcgct gctgagtttt gcgttccgtc cggagctcgc gcacgcgttc ggacggttcc
     2821 acggcggcgc ggtctcggcg actggcgtca aatagcgatt agccgcgcaa aagggctgcg
     2881 cggcgcaggc tcgacggctc gacgcaactc gccgtcacgg cgagccgatg gtaacctaca
     2941 tgggcatgct cgatctggcg caactcgaac ccgaacggcg ccgacccatc acgcgtgccg
     3001 aatatcacgc gatgggcgaa gcggggctct tcgagaacga acacgtggag ctgctcgacg
     3061 gggtcatcgt caagatgagc ccgcgcagtc tcgaccacga ctcgatcatc gagcgtctga
     3121 cggaacgctt gttgccccca ctcgtcggcc gagcgcgcgt gcgcattcag ctcgctttcg
     3181 tggcgagccc ttactccgag cccgaaccgg acgtggccat cgtgccgaaa gacgagccgc
     3241 ggctcgatca tcccggtcac gccgcgctac tgatcgaagt cgccctcacc tcgctacgct
     3301 tcgaccgcag caccaaagcg agcatttacg cgcgtgccgg cg
//
LOCUS       DATIML010000908         2751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3660617, whole genome shotgun sequence.
ACCESSION   DATIML010000908 DATIML010000000
VERSION     DATIML010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3660617"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..654
                     /locus_tag="VLJ38_15725"
     CDS             <1..654
                     /locus_tag="VLJ38_15725"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU41027.1"
                     /translation="ESLGDAVKAIDAVQERIGKPGGVRTHYAGAAQAFQESLASEPML
                     ILAALITVYIVLGVLYESYIHPITILSTLPSAGVGAFLALIVCKSDFNVIALIGIVLL
                     IGIVKKNAIMMIDFALEAERDQGITPLEAIHQACLLRFRPIMMTTMAALLGALPLALG
                     TGMGSELRRPLGISIVGGLLVSQVLTLYTTPVIYLYMDRLGRRLSGRKGASTALAQA"
     gene            659..>2751
                     /locus_tag="VLJ38_15730"
     CDS             659..>2751
                     /locus_tag="VLJ38_15730"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU41028.1"
                     /translation="MNISAPFIRRPVATSLLAAALLLAGLLAYFHLPVAPLPHVDFPT
                     IQVSASLPGASPETMASAVATPLERRFGRIAGLAEMTSSSSLGSTSITLQFDLDRNVD
                     GAARDVQAAIAAAGGELPPDLPLKPRYRKVNPSDAPTLILSLTSDTLPLVKVFDIANN
                     VIAQKISQVKGVGEVFVGGGQQPAVRVELDPPTLAGMGLAMSDVRRAIAATTTNQAKG
                     SIGGKIQATTIGANGQLFDAKSYRLIRITRPQGTTAALGDIARVYDDVENNRVAGWAD
                     GKRAVLMIVRKQSDANVIETNKRVLALLPELMSAVSPAVHLEVNSDRTDTIKASVDDV
                     EITLGISMALVVLVVFAFLRSARATLVPTVAMPLSLIATFGVMWLLGYSIDNLSLMAL
                     TISTGFVVDDAIVVTENIARGIEHGQRPLAAALEGAKQIGFTIVSITLSLLAVFVPLL
                     LMGGIVGRLFREFAVTLGIAVAVSALISLTLTPMMCSRLLKPESDRERGWLYRQSERF
                     FAWLLAVYERALRWALAHRTTMLLVTLVTVALNVYLMAKVPKGLFPQQDTGLLVVSTE
                     AAQDVSFAEMERLQKQVNDVLDRERDIDHYVTFIGSGGFGVGNTGRGFITLKPLDQRK
                     STADQVLARLRGQFNKIAGIQTYLQSRQEVNVGGRLARTQYQYTVQTASLEELRTWSV
                     RLTDAMRKLPQLKDVV"
BASE COUNT          442 a          934 c          897 g          478 t
ORIGIN      
        1 gagtcgctcg gcgacgccgt gaaggccatc gacgcggtgc aggagcgcat cggtaagccg
       61 ggcggcgtgc gcacgcacta tgcgggtgcc gcgcaagcgt tccaggagtc gctcgcgagc
      121 gaaccgatgc tcatcctcgc cgcgctcatc accgtctaca tcgtgctcgg cgtgctttac
      181 gagagttaca tccacccgat tacgattttg agcacgttgc cgtcggcggg cgtcggcgcg
      241 ttcctcgcgc tcatcgtgtg caagagcgac ttcaacgtga tcgcgctgat cgggatcgtg
      301 ctcctgatcg gcatcgtgaa gaaaaacgcg atcatgatga tcgattttgc gctcgaagcg
      361 gagcgtgacc agggcatcac gccgctcgag gcgattcacc aagcgtgcct gctgcgtttc
      421 cggccgatca tgatgacgac catggcggcg ctgctcggcg cgctgccgct cgcgctcggc
      481 acgggcatgg gctcggagct caggcgcccg ctcggtatca gcatcgtggg cgggctcttg
      541 gtttcccagg tgctcacgct ctacacgacg cccgtgattt acctgtacat ggatcgcctc
      601 ggccgccggc tttccggccg caagggcgcg agcacggcgc tcgcgcaagc ctgaccccat
      661 gaacatctcg gccccgttca tcaggcgacc ggtggccacg agcctgctcg ccgcggcgct
      721 cttgctcgcg gggctgctcg cgtatttcca cctgccggtc gcgccgttgc cgcacgtcga
      781 ctttccgacg atccaggtga gcgcgtcgct gccgggcgcg agccccgaga cgatggcgtc
      841 ggccgtggcg acgccgctcg agcggcgctt cgggcggatc gcggggctcg cggagatgac
      901 gtcatcgagc agcctcggct cgacgagcat cacgctgcag ttcgatctgg atcgaaacgt
      961 cgacggcgcc gcgcgcgacg tgcaggccgc gatcgcggcc gccggcggcg agctcccgcc
     1021 cgatctcccg ctgaaaccgc gttaccgcaa ggtgaatccc tcggacgcgc cgacgctcat
     1081 cctctcgctc acgagcgaca cgctgccgct cgtcaaggtg ttcgacatcg cgaacaacgt
     1141 catcgcgcag aagatctcgc aggtcaaagg cgtaggcgaa gtcttcgtcg gcggcgggca
     1201 gcagcccgcg gtgcgcgtcg agctcgatcc gccgacgctc gcgggcatgg gactcgcgat
     1261 gagcgacgtg cgccgcgcga tcgccgcgac gacgaccaac caagccaaag gcagcatcgg
     1321 cggtaaaatc caggcaacta cgattggcgc caatggccag ctgttcgacg ccaagagcta
     1381 tcgcctgatt cgcatcacgc gtcctcaggg tacgaccgcg gcgctcggcg atatcgcgcg
     1441 cgtctacgat gatgtcgaga acaaccgcgt cgccggctgg gcggacggca agcgcgccgt
     1501 gctgatgatc gtgcgcaagc agtcggacgc gaacgtgatc gagacgaaca agcgcgtgct
     1561 cgcgctcttg ccggagctca tgagcgcggt ttcgccagcg gttcacctgg aagtgaacag
     1621 tgaccgcacg gacacgatca aagcgtccgt cgatgacgtc gagatcacgc tcggtatcag
     1681 catggcgctc gtcgtgctcg tcgtgttcgc gttcttgcgc tcggcgcggg cgacgctcgt
     1741 gcccacggtg gcgatgccgc tctcgctgat cgcgaccttc ggcgtgatgt ggctcctggg
     1801 ctacagcatc gacaacctgt cgctgatggc gctcacgatc tcgacgggct tcgtcgtgga
     1861 cgacgccatc gtcgtcaccg agaacatcgc gcgcggcatc gagcacggcc agcgcccgct
     1921 cgccgccgcg ctcgagggcg ccaagcaaat cggcttcacc atcgtctcga tcacgctctc
     1981 gctgctcgcg gtgttcgtgc cgctcttgct catgggcggc atcgtgggcc ggctgttccg
     2041 cgaattcgcg gtgacgctcg gcatcgccgt cgccgtttcg gcgctgatct ccctgacgct
     2101 cacgcccatg atgtgctcgc gcctgctcaa gcccgagtcg gaccgcgagc gcggctggct
     2161 gtaccggcag tccgagcgtt tcttcgcctg gctgctcgcg gtttacgagc gtgccttgcg
     2221 ctgggcgctc gcgcatcgga cgacgatgct gctcgtcacg ctcgtcaccg tggcgctcaa
     2281 cgtttacttg atggccaagg tgccgaaggg cctcttcccg cagcaggaca cggggctgct
     2341 cgtcgtgtcg acggaggccg cgcaggacgt ttcgttcgcc gagatggagc gcctgcaaaa
     2401 gcaggtgaac gacgtgctcg accgcgagcg cgacatcgat cactacgtga cgttcatcgg
     2461 ctcgggcggc ttcggcgtcg gcaacacggg ccgcggcttc atcacgctga agcccctcga
     2521 ccagcgcaag tcgaccgccg accaggtact cgcgcgcttg cgcggtcagt tcaacaagat
     2581 tgccggcatt caaacgtacc tgcagtcacg ccaagaggtg aacgtcggcg gccggctcgc
     2641 gcgcacccag taccagtaca ccgtccaaac cgcgagcctc gaggagctcc gcacttggtc
     2701 cgtgcggctg acggacgcca tgcgcaagct gccgcagctc aaagacgtcg t
//
LOCUS       DATIML010000909         6597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_193598, whole genome shotgun sequence.
ACCESSION   DATIML010000909 DATIML010000000
VERSION     DATIML010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6597
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193598"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VLJ38_15735"
     CDS             complement(<1..181)
                     /locus_tag="VLJ38_15735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41029.1"
                     /translation="MNALSTSRLASAGIVGIAAWRSEPGLSLVPRPDELSVEEPLEIR
                     VAGETLAVTMRTPGHD"
     gene            complement(195..2567)
                     /locus_tag="VLJ38_15740"
     CDS             complement(195..2567)
                     /locus_tag="VLJ38_15740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FdhF/YdeP family oxidoreductase"
                     /protein_id="HSU41030.1"
                     /translation="MSREYDENSAREQVDTPAPKAPHAAAEQGVPRDEPPPETEAPRL
                     ERREESAAGFTSIYETAKHGFGEMGVARTVSTLLKINQKDGFDCPSCAWPDPDGERKL
                     AEFCENGAKAVASEATRKRVTPEFFAEHSIASLLERSDYWLEQQGRLAHPMLRAKGAD
                     HYTPISWDDAFTLIADELNGLASPNEASFYTSGRASNEAAFLYGLFARQFGTNNLPDC
                     SNMCHESSGLGLTESIGIGKSTVKIEDFAQADAIFVIGQNPGTCHPRMLTELEKAAKN
                     GCKIVGVNPLPETGLMRFKNPQEPLSLLGRGTPLACLFMPVRVNGDVALLKGVMKEML
                     EADRLSGGRVLAHDFIRDHTEGFEAFARDLENESWERLVAASGVSRAHLGRAAEIAIG
                     AERMICSWAMGITQHKNGVANVQTIANFALLRGQIGRPGAGLCPVRGHSNVQGDRTVG
                     IWEKMSPEYLAALGKEFGFEPPEAHGFDTVKTIQAMHDGRVKVFVGLGGNFLAAPPDT
                     HFTAEAIARCRLTVQISTKLNRAHLVTGEQALILPCLGRTERDVQAGGAQFVTVEDTT
                     GVVHASHGSLPPASEHLKSEPAIIAGMAQRTLGARTTVAWQTLADDYDRIREHIEHVV
                     PGFTDYNRRVREPGGFYLPNGPREGRFTTPSGRARFVVHPVAEHELRSEQLLLTTIRS
                     HDQFNTTIYGETDRYRGVARGRRVLFLSPEEIERRGFADGALVDIVSHFGEERRRAAG
                     FRLVPYPVPLGCAAAYFPETNVLVPVGAVSDGSNQPASKSIVVTLEQAAS"
     gene            2697..2996
                     /locus_tag="VLJ38_15745"
     CDS             2697..2996
                     /locus_tag="VLJ38_15745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41031.1"
                     /translation="MTITLTGLLILLLIAGICGAIGRAIAGGTAGGVIVSIAVGFVGA
                     LLGSFIAHYLRLPELMLVTVDRHPFPILWSIIGAAVFVALVHLLSGGVRRDWRYR"
     gene            3228..3533
                     /locus_tag="VLJ38_15750"
     CDS             3228..3533
                     /locus_tag="VLJ38_15750"
                     /inference="COORDINATES: protein motif:HMM:NF017239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family peptide modification chaperone"
                     /protein_id="HSU41032.1"
                     /translation="MSSAFARVPALTRGVRLRLDERPGWVLDSNQRAMRLSDGAAAAI
                     RLIDGVRSIADIARALRQRYEGGIDTFDADVLVLVRVLLGRGLVMLRTPAVAAAATR"
     gene            complement(3606..5195)
                     /locus_tag="VLJ38_15755"
     CDS             complement(3606..5195)
                     /locus_tag="VLJ38_15755"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSU41033.1"
                     /translation="MSGQAWWQRGIVYQIYPRSFADSNGDGVGDLRGILERVGYLAEL
                     GVDAVWISPIYPSPMADFGYDVSNYTDVHPLFGSLDDLRELVRRVHALGMKLILDFVP
                     NHTSNEHPWFLEAKSSRTNDKRQFYLWQDAKPDGSPPNNWLSVFGGSAWTWDETTGQY
                     YYHAFLPEQPDLNWRHPEVRRQMYAAMRFWLELGVDGFRVDVLWHLIKDAEWRDNPPN
                     PDYRAGEPPYTTLLPAYSTDQPEVFEIVREMRRVVEEYDERVLIGEIYLPISRLVSYY
                     GAAGDGAHLPFNFQLIVLPWRASDIAAAISEYEAALPPGAWPNWVLGNHDQARIASRI
                     GLRQARVAAMLLLTLRGTPTLYYGDELGLHDVPILPEQYRDPQGKNIGLSRDPARTPM
                     QWSAAPSAGFTTGTPWLPVADDYEHVNVERELADPDSMLALYRRLIALRRSEPAFVAG
                     SYRPVIAGGDIVAYTREHDGRRWLVALNLGGQPAELSLAALGATGEIVVATSRQRQGQ
                     RVAGQLALAGDDGVLVRLEST"
     gene            complement(5192..>6597)
                     /locus_tag="VLJ38_15760"
     CDS             complement(5192..>6597)
                     /locus_tag="VLJ38_15760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3459 domain-containing protein"
                     /protein_id="HSU41034.1"
                     /translation="ADFPGRFGWGYDGVDLFAPTRLYGGPDDFRAFVDRAHALGMGVI
                     LDVVYNHIGPDGNYLKQFSPDYFSSRYQNEWGEALNFDGPGSAPVREFFCENAGYWID
                     EYRFDGLRLDATQTILDASPRHVLADVTERARAAGRAHARNIYISAENEPQDSRVVAT
                     PETGGYGCDALWNDDFHHSARVALTGRREAYYADYRGSPQELISAVKWGFLYQGQYYA
                     WQKKRRGQPALGLTARHFVSYLQNHDQVANSLRGDRIGRLTSAAELRALTTFWLLAPP
                     TPLLFQGQEFDASAPFLYFADHGGELREKVAQGRHEFLDQFQAVHASRVSLDHPGTVG
                     TFERCKLDFSERERHAGTYALHRELLALRREDPAFAAERADSLHGAVLGERAFVLRYF
                     CEAGDRLVLVNLGPDLELDPVPEPLLAPAAGCEWKVLLSSEDTRYGGLGCRVPYADGK
                     WTLTARAACVLCGEKTV"
BASE COUNT         1034 a         2134 c         2238 g         1191 t
ORIGIN      
        1 cgtcgtggcc gggcgtgcgc atcgtgacgg cgagtgtttc ccccgcgacg cggatttcga
       61 gcggttcttc gacgctgagc tcgtccgggc gcggcacgag cgacaggccg ggctcagagc
      121 gccaggccgc gatgccgacg atgcccgcac tggcgagccg gctagttgac aatgcgttca
      181 cgccgaggct cctctcacga cgcggcctgt tcgagggtca cgacgatcga cttcgaggcc
      241 ggctgattgc tgccgtcgga gaccgcgccg accggcacga gcacgttagt ctcggggaaa
      301 taagcggcag cacacccgag cggcaccggg tagggcacga gccgaaagcc ggcggcgcgc
      361 cgccgctcct cgccgaagtg actcacgatg tcgaccaagg ctccgtccgc gaagccgcgc
      421 cgctcgattt cctccgggct caaaaacagc acgcgccggc cgcgcgccac gccgcggtag
      481 cgatcggtct cgccgtaaat cgtggtgttg aactgatcgt ggctgcggat ggtcgtgagc
      541 aggagctgct cgcttcgaag ctcgtgctcg gcgacggggt gcacgacgaa acgcgcgcgt
      601 ccgctcggtg tcgtgaagcg accttcgcgc gggccgttcg gcaggtaaaa gccgccaggt
      661 tcgcgcacgc ggcgattgta gtcggtgaag ccgggcacga cgtgctcgat gtgctcgcga
      721 atccgatcgt agtcgtccgc gagcgtctgc cacgcgacgg tcgtgcgcgc gccgagcgtc
      781 ctctgcgcca tcccggcgat gatggcaggt tcgctcttca agtgttcgga ggcgggcggc
      841 agcgagccgt gcgaggcgtg cacgacgccc gtcgtgtcct cgaccgtcac gaattgcgcg
      901 cctcccgctt gcacgtcgcg ctcggtgcgg ccgaggcacg gcaggatcag cgcctgctcg
      961 cccgtgacga ggtgggcgcg attgagcttc gtcgaaattt gcacggtgag ccggcagcga
     1021 gcgatggcct cggcggtgaa atgcgtgtcg ggtggcgccg cgaggaagtt gccgccgagc
     1081 ccgacgaaca ccttcacgcg gccgtcgtgc atggcttgaa tcgtcttcac ggtgtcgaag
     1141 ccgtgcgcct cgggtggctc gaagccgaac tccttaccga gcgcggcgag atactcgggg
     1201 ctcatctttt cccaaatgcc gaccgtgcga tcgccctgca cgttgctgtg cccgcgcacg
     1261 gggcaaagcc cggcgccggg gcggccgatc tgcccgcgca ggagcgcgaa attcgcgatg
     1321 gtctgcacgt tcgcgacgcc gtttttgtgc tgcgtgatcc ccatcgccca cgagcaaatc
     1381 atccgctcgg cgccgatggc gatctcggcg gcacgcccca aatgtgcgcg cgaaacgccg
     1441 ctcgccgcca cgagccgctc ccagctctcg ttctcgagat cgcgagcgaa agcctcgaag
     1501 ccttccgtgt ggtcgcggat gaaatcgtgg gcgagcacac ggccgccgct cagccgatcg
     1561 gcctcgagca tttccttcat gacgcccttg agcagcgcca cgtcgccgtt cacgcgcacg
     1621 ggcatgaaca agcacgcgag cggcgtgccg cgaccgagca ggctcagggg ctcttgcggg
     1681 ttcttgaaac gcatgagtcc ggtctcgggc agcggattga cgccgacgat cttgcagccg
     1741 ttcttggccg ccttttcgag ctccgtcagc atgcgcgggt ggcacgtgcc ggggttctgc
     1801 ccgatgacga agatggcgtc ggcctgcgcg aagtcttcga tcttcaccgt cgacttgccg
     1861 ataccgatgc tctcggtcag gccgaggccg ctcgactcgt ggcacatgtt cgagcagtcg
     1921 ggcaggttat tcgtgccgaa ttggcgcgcg aacagaccgt agaggaacgc ggcttcgttg
     1981 ctcgcgcgac ccgacgtgta gaacgaggct tcgttcggcg aggcgagtcc gttgagctcg
     2041 tccgcgatca gcgtgaacgc gtcgtcccag ctgatgggcg tgtagtggtc tgcgccttta
     2101 gcgcgcagca tcgggtgcgc gagccggcct tgttgctcga gccagtagtc gctccgctcg
     2161 agcagcgagg cgatcgagtg ctccgcgaag aattcgggcg tcacgcgctt gcgcgtggcc
     2221 tcgctcgcga cggccttggc gccgttttcg cagaactcgg cgagcttgcg ctcgccgtcg
     2281 gggtcgggcc aggcgcagct cgggcaatcg aagccgtcct tttggttgat tttgagtaag
     2341 gtcgaaaccg tgcgtgccac gcccatctcg ccgaagccgt gcttggcggt ttcgtagatg
     2401 gaggtgaaac cggccgctga ctcctctcgg cgttccaggc gcggagcttc ggtttcgggc
     2461 ggtggctcgt cacggggaac gccttgctcc gctgccgcgt gtggcgcttt cggcgcgggc
     2521 gtgtcgactt gctcgcgggc gctgttttcg tcgtactcgc gactcatcct cgttctcctc
     2581 ggagtcaggt cagctttccg ccagtctact ccgcgcgacg ttgggcggcg gccagaccgg
     2641 cgtggctcga tcgtggcaaa tcggcgcacg gcgcggctct tgcacagccg tgaagcatga
     2701 ccatcactct cactgggctg ctgattttgc tgctcatcgc cggcatctgc ggcgccattg
     2761 gccgtgccat cgcgggtggc actgcgggcg gcgtcatcgt ctccatcgcc gtgggtttcg
     2821 tcggtgcgct gctcgggtcg ttcattgcgc actacctgcg actgcctgag ctcatgctcg
     2881 ttacggtgga tcggcatcca ttcccgatcc tctggtcgat cattggcgcg gccgtattcg
     2941 tcgcgctcgt ccatctcctt tctggcggtg tacggcgcga ttggcgctat cggtagagtt
     3001 gctgggactc ttccgtgcgc ggaacctcac caaagggtgc tcagcggcgc cagtccgcct
     3061 cgtgcgggac gaagtgccac gtcgcgcggc gagctggatt ccgaggttat cttctccagg
     3121 ggcgctcggc ccgccgcagg catccttcgg gcgtgcacgg aatttgctgg aagcagccgt
     3181 cgtgaacgcc agagtattcg ttgaaggtga aagtagagca gggcgacgtg agtagtgcat
     3241 tcgctcgagt gcccgcgttg acgcggggtg tgcgcctgcg tctcgatgaa cgccccggct
     3301 gggtcctaga ttcgaatcag cgcgccatgc ggctcagcga cggcgccgca gccgcgattc
     3361 gcttgattga cggcgtgcgt agcattgccg atatcgctcg cgctctgcgt cagcgctatg
     3421 agggcggtat cgacacgttc gacgccgacg tactcgtgct cgtgcgtgtg ctgctcgggc
     3481 gcggcctcgt catgctgcgg acgccggcgg tagcggcggc ggccacgcgc tgagccatcg
     3541 gggctcgcgg cgcgcggcga cacctcgtgt tcctctcgac gcgctctcgg ttccgtcgag
     3601 cgccgtcagg tcgattcgag ccgtacgagc acgccgtcgt cgcccgcgag cgccagctgc
     3661 ccggcgacgc gctgcccttg ccgctgccgt gacgtagcga ccacgatctc gcccgtcgcc
     3721 ccgagcgcgg cgagggagag ctcagcgggc tgcccgccga ggttcagagc cacgagccag
     3781 cgccgtccgt cgtgttcgcg cgtgtaggcg acgatgtccc ctcccgcgat gaccggacgg
     3841 tagctgccgg cgacgaacgc aggctcgctc ctgcggagtg cgatcagccg gcggtacagt
     3901 gccagcatcg agtccggatc cgcgagctcg cgttcgacgt tcacgtgctc gtaatcgtcg
     3961 gcgaccggca gccaaggggt cccagtcgtg aaaccggcgc tcggcgcagc cgaccactgc
     4021 attggcgtgc gcgcggggtc acggctcagg ccgatgttct tgccttgggg atcgcgatac
     4081 tgttcgggca gaatcgggac gtcgtgcagg ccgagctcgt cgccgtaata gagcgtcgga
     4141 gtgccgcgga gcgtgaggag cagcatggcc gcgacgcgcg cttggcgaag accgatgcga
     4201 ctcgcgatgc gcgcctggtc gtgattgccg agcacccagt tcggccaggc gccgggcggc
     4261 agcgccgcct cgtactcgct gatggccgcc gcgatgtcgc tcgcccgcca cgggagcacg
     4321 atgagctgaa agttgaacgg caggtgcgcg ccgtcacccg ccgccccgta gtagctcacg
     4381 aggcggctaa tcggcaggta aatctcgccg atgagcacgc gctcgtcgta ctcttcgacg
     4441 acgcgccgca tctcgcgcac gatctcgaac acctcgggct gatccgtcga gtaggcgggc
     4501 aggagcgtcg tgtagggcgg ctcgcccgcg cggtagtcgg ggttcggcgg attgtcgcgc
     4561 cactcggcgt ctttgatcag atgccagagc acatcgacgc gaaagccgtc gacgccgagc
     4621 tcgagccaga aacgcatggc cgcgtacatc tggcgccgta cctccggatg tcgccaattg
     4681 aggtcgggct gctcgggtaa gaacgcgtgg tagtagtatt ggcccgtcgt ctcgtcccag
     4741 gtccaggcgc taccgccgaa gacgctgagc cagttgttgg gcgggctgcc gtcgggtttc
     4801 gcgtcctgcc agaggtaaaa ttggcgcttg tcgttcgtgc gcgagctctt ggcttcgagg
     4861 aaccacgggt gttcgttgga cgtgtggttc gggacgaagt ccaggatgag cttcatgccg
     4921 agcgcgtgca cgcgccgcac gagctcgcgc agatcgtcga gcgagccgaa gagcgggtga
     4981 acgtcggtgt agttcgagac gtcgtagccg aagtccgcca tcggagacgg gtagatgggc
     5041 gagatccaca cggcgtcgac gccgagctcg gcgaggtaac ccactcgctc caagatgccc
     5101 cgtagatcgc cgacgccgtc gccgttcgaa tccgcgaacg agcgcggata gatctgataa
     5161 acgatgccac gctgccacca agcttgtccg ctcatacggt cttctccccg caaagcacgc
     5221 acgcggcacg cgccgtgagc gtccactttc cgtccgcgta gggtactcgg cagccgagcc
     5281 cgccgtacct cgtgtcttcg ctcgagagca ggactttcca ctcgcagccg gcggccggcg
     5341 ccaagagcgg ctcgggcacg gggtcgagct ccagatccgg cccgaggttc acgagcacga
     5401 gccggtcgcc ggcttcgcag aagtaacgca acacgaacgc gcgctcgccg agcaccgcgc
     5461 cgtgcagcga gtccgctcgt tccgccgcaa acgccgggtc ctcacgcctg agcgccaaga
     5521 gctcgcgatg cagcgcgtaa gtcccagcgt gccgctcgcg ctccgaaaaa tcgagcttac
     5581 agcgttcgaa cgtcccgacg gttcccggat gatcgagcga gacgcggctc gcgtggacgg
     5641 cttgaaactg atccaaaaat tcatgccgtc cttgcgcgac cttttcacgg agctcgccgc
     5701 cgtgatcggc aaaatacaaa aatggggcgc tcgcgtcgaa ctcctgtccc tgaaacaaga
     5761 gcggcgtcgg tggcgccaga agccagaagg tcgtgagggc gcggagctcg gcggcactcg
     5821 tcaagcggcc gatgcgatca ccacgcaagc tgttcgcgac ttggtcgtga ttttggaggt
     5881 agctcacgaa gtgacgcgcg gtcaggccga gtgccggctg gccgcggcgc ttcttctgcc
     5941 acgcgtagta ttggccttga tagaggaagc cccatttgac ggccgagatg agctcctgcg
     6001 ggctgccgcg atagtctgcg taatacgcct cgcgccgccc cgtgagcgcg acgcgcgcgc
     6061 tgtgatggaa gtcgtcgttc cagagtgcat cgcagccgta cccgcccgtt tccggtgttg
     6121 cgacgacgcg gctgtcttgc ggttcgtttt cggccgaaat gtagatgttc cgagcgtgcg
     6181 ctcgccccgc cgcgcgggcg cgctccgtca cgtcggcgag gacgtggcgc ggagacgcgt
     6241 cgaggatcgt ttgcgtcgcg tcgagcctga gtccgtcgaa gcgatactcg tcgatccagt
     6301 aacctgcgtt ttcacaaaaa aattcacgga cgggtgcgct gcccgggcca tcgaaattga
     6361 gcgcctcacc ccattcgttc tgatagcggc tgctgaaata gtccggcgaa aattgtttca
     6421 gataatttcc atcgggaccg atgtgattgt agaccacatc gagaatcact cccatcccga
     6481 gcgcgtgcgc gcgatccacg aaggcgcgga aatcatccgg gccgccgtaa agccgcgtgg
     6541 gtgcgaaaag atcgacacca tcgtaacccc agccgaagcg gccgggaaaa tccgcga
//
LOCUS       DATIML010000910         1662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5397021, whole genome shotgun sequence.
ACCESSION   DATIML010000910 DATIML010000000
VERSION     DATIML010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5397021"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..1031)
                     /locus_tag="VLJ38_15765"
     CDS             complement(183..1031)
                     /locus_tag="VLJ38_15765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HSU41035.1"
                     /translation="MSGDSVLRAITDDGAFRVITARTSETVSGAIAAQGATGNTARTF
                     GELITGAILYRETMAPQLRVQGVLKGSGGTGSLVADSHPSGRTRGLVQLKGGRELDLE
                     NGAVIQMMRTLPSGRIAQGLVQLPSGGGISQALMEYMQTSEQVVSMVAVSTVVGTGGD
                     FAAGGYMVQLLPEVGRGPLMVMTERLREFESIDERVGEPGFSPESLLEQLLDGMPFTR
                     LEESSVSFECWCDELRVVAAIATLSRSDLEHLLADGEVLEIACEYCKREYRIPPARLR
                     GLLERS"
     gene            complement(1140..1325)
                     /gene="yacG"
                     /locus_tag="VLJ38_15770"
     CDS             complement(1140..1325)
                     /gene="yacG"
                     /locus_tag="VLJ38_15770"
                     /inference="COORDINATES: protein motif:HMM:NF015821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HSU41036.1"
                     /translation="MRLTCPICKTVVEDAPADLPTRPFCSKRCKLADLDNWLSDAYRI
                     SSPLNPSDTDDDELKLS"
     gene            complement(1374..>1662)
                     /locus_tag="VLJ38_15775"
     CDS             complement(1374..>1662)
                     /locus_tag="VLJ38_15775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSU41037.1"
                     /translation="MTSALRETKTAGCVQRVGSMLTLFFQAGPVTDFRRALGSDTSRF
                     SRFHAALLADGVYWPPSQFEAAFLSLAHTDADIDRTVAVVQSALQRSAATA"
BASE COUNT          287 a          550 c          556 g          269 t
ORIGIN      
        1 tacgcgcaaa gctcgctctt cgacagcccg gcgagcatcg cgttcggcag cggtcacggc
       61 gacaagaaga ccgcgtacat cgcaaacttc gcgatcaata gcgtgcaggc cggcttgccc
      121 gcgcatccgg gcattttatc gctgcccgtc cccgtgccgg gcgcgtcctt gccctgatgc
      181 gatcagctgc gttcgagtag tccgcgcaag cgcgcgggcg gaatgcggta ttcgcgcttg
      241 cagtactcgc aggcgatctc gagcacttct ccgtcggcga gcaggtgctc gaggtcgctc
      301 ctgctgagcg tcgcgatcgc ggcgacgacg cggagttcgt cgcaccagca ctcgaagctc
      361 acggagctct cttcgaggcg cgtgaacggc atgccgtcga gcagttgctc gagcaagctc
      421 tcgggggaaa agccgggctc gccgacgcgc tcgtcgatgc tctcgaactc gcgcaagcgc
      481 tcggtcatga ccatgagcgg cccgcgaccg acctcgggta agagctgcac catgtagccg
      541 cccgcggcaa agtcgccgcc agtgccgacc acggtcgaga ccgcgaccat cgagaccacc
      601 tgctcggagg tctgcatgta ctccatgagc gcctgcgaaa tgccgccgcc gctcggcaac
      661 tgcacgaggc cctgcgcgat gcgcccgctc ggcagcgtac gcatcatctg aatcacggcg
      721 ccgttttcga ggtcgagctc gcgcccgccc ttgagctgaa ccaggccgcg cgtgcgcccg
      781 ctcgggtgcg aatcggcgac gaggctgccc gtgccgcccg aacccttgag cacgccttgc
      841 acgcggagct gaggcgccat ggtctcgcgg taaaggatcg cccccgtgat gagctcaccg
      901 aacgtgcgcg ccgtattgcc ggtcgcgccc tgagcggcga tggctccgct caccgtttcc
      961 gacgtgcgcg ccgtgatgac ccggaatgcg ccgtcgtccg tgatcgctcg gagcacgctg
     1021 tcgcccgaca tgcacgaagc ataaccaccc gcggggcggt tgccagcact cggcccgagg
     1081 caagcacggc cggtatcaca ctcggagggg tgtttcgcgc gagaagccgg agcgggcgct
     1141 cagctcaatt tgagctcgtc gtcgtccgtg tcgctggggt ttagggggct cgagatgcga
     1201 tacgcatcgc tcagccaatt atcgagatcg gcgagcttgc agcgcttcga gcagaagggc
     1261 cgcgtcggga gatccgcagg ggcgtcctcg acgacggttt tgcagatggg gcaggtgagg
     1321 cgcacgagtg ttcccttcga atgtgccaca caaacccgag ctcggctctt gtctcaagcc
     1381 gtagcggccg agcgctggag cgcgctctgc acgaccgcga cggtgcgatc gatgtcggca
     1441 tcggtgtggg cgagtgacag aaacgccgcc tcgaactgag agggcggcca atacacgccg
     1501 tctgccagca gggcggcgtg aaagcgcgaa aagcgggagg tgtcggagcc tagtgcgcgg
     1561 cgaaaatccg tcaccggacc agcttggaag aacaaggtaa gcatcgagcc gacgcgttgc
     1621 acgcacccgg cagtcttcgt ctcccgcagg gcgctcgtca tg
//
LOCUS       DATIML010000911         7794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3083873, whole genome shotgun sequence.
ACCESSION   DATIML010000911 DATIML010000000
VERSION     DATIML010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7794
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3083873"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VLJ38_15780"
     CDS             <1..459
                     /locus_tag="VLJ38_15780"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HSU41038.1"
                     /translation="GTQAYTRAGTLKTDGLGNLVTNEGQLLDPPITIPNGSTNVSIAS
                     DGKVSVTMSGETTPVEIGQIQLATFLNPAGLKALGHNLFVKTLASGEPQQGTAGTDGR
                     GTLLQGSFERSNVDIVSEMIGMISAQRGYEMNSKVITTADDMLRAATQMK"
     gene            465..1202
                     /locus_tag="VLJ38_15785"
     CDS             465..1202
                     /locus_tag="VLJ38_15785"
                     /inference="COORDINATES: protein motif:HMM:NF024544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella basal body P-ring formation protein
                     FlgA"
                     /protein_id="HSU41039.1"
                     /translation="MRHPSLLLAFFAVLPLAAPASAENRVSIEGPTVRVSDIDPAAPA
                     EVADIELGRAPPPGSSRIFTRAEIRQRIREAGADAAHVNVPPSIRVEAPAEHWRPEEV
                     AARSDAAVRAALPLGVSLIKLDAQRSIVVPPGSSVTSVKPVIPHAVGRHDVTVVAEVR
                     RNLELVARAPLSLVVDVGEDAFAPVLRKGDRITLIIEQGNARIGASGVTLADANVGDA
                     IFCRVTSTGKVLKAKVQSRDVGRVVEL"
     gene            1211..1897
                     /locus_tag="VLJ38_15790"
     CDS             1211..1897
                     /locus_tag="VLJ38_15790"
                     /inference="COORDINATES: protein motif:HMM:NF014195.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HSU41040.1"
                     /translation="MLGLCLLATLAAACGPAHIAPFTPKERKYDPGAYAATQKEYRPA
                     VGSIYSEAQSGLLEDTRALRVGDLVVIRINEKADAQGNATTDLKKDTSRAAGMDSFLA
                     LMPKLQRMNPNLDPAKLFALAAKSDFAGSGNTARSGSLQGNIGVHVKREMPNGDLYVE
                     GTKVVMINHEEYHLYVSGVLRPADIQPDNSVDSSLIADARVEFTGRGDINDQVERGWL
                     TKILDVVNPF"
     gene            1901..3043
                     /locus_tag="VLJ38_15795"
     CDS             1901..3043
                     /locus_tag="VLJ38_15795"
                     /inference="COORDINATES: protein motif:HMM:NF003676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HSU41041.1"
                     /translation="MHDFSRPGLRRFRVLFAALLCALGVTSGAPAAHADHIRDLCDVV
                     GARDNQLVGYGVVTGLNGTGDDVSVPFAKQSLESLLRRLGVQIPDQQVRLRNVAAVIV
                     TTTIPAFVRSGGRLDVTVSSMGNARSLTGGVLVQTALHGADRRTYAVAQGPLVVGGFS
                     ASGSSGSSVQANSTSTARVPNGALVEREIPMSPNQNGKLVLALRAPDFATASRVAEAL
                     TKDLGTGSARALDGGAIEVKPPSSFKDRWVELIAHVGELDVDPVQNARVVINERTGTI
                     VVGGEVRLSPVAIAQGGITITVHEQKDVSQPEAFSQRGKTAIVNNSDVSAEEKPSNGL
                     AYVEGATTLADVAKALSMLGVSPRDLASILQALKAAGALRAEVVVQ"
     gene            3040..3345
                     /locus_tag="VLJ38_15800"
     CDS             3040..3345
                     /locus_tag="VLJ38_15800"
                     /inference="COORDINATES: protein motif:HMM:NF021638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod-binding protein"
                     /protein_id="HSU41042.1"
                     /translation="MKPLEAASVALQKPDAPLHQPQAKPSEKAIKAARDFEAIMVRHM
                     LESMQKTTDINGKSHANNGYQSMATEALADSIAKGGGLGLADLIAHTLESEMGRGKP"
     gene            3473..3727
                     /gene="flgM"
                     /locus_tag="VLJ38_15805"
     CDS             3473..3727
                     /gene="flgM"
                     /locus_tag="VLJ38_15805"
                     /inference="COORDINATES: protein motif:HMM:TIGR03824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HSU41043.1"
                     /translation="MDAYQRLAPVGSASQVKGPAPVASTPSHAENAEVKISAKARGMA
                     TDGDAAIDTTKVNDLKQKIASGDLKLDHDKIAARMLERAG"
     gene            3729..4076
                     /locus_tag="VLJ38_15810"
     CDS             3729..4076
                     /locus_tag="VLJ38_15810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41044.1"
                     /translation="MATAPARQGDDGALPPVFAELERVLAEEARALRKLDREGIERAA
                     EEKAKLCDELAAARAQLKPAQRHGLERIRKAALQNHMLLAHARDSVRQVLGTASGRPA
                     SPVLGGLRLDLRG"
     gene            4078..5454
                     /gene="flgK"
                     /locus_tag="VLJ38_15815"
     CDS             4078..5454
                     /gene="flgK"
                     /locus_tag="VLJ38_15815"
                     /inference="COORDINATES: protein motif:HMM:TIGR02492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HSU41045.1"
                     /translation="MGLTQILSTALDGLNAQSVGLSTTGDNISNVNTPGYARREVQLE
                     TRGQGLTGVNVAGLQRVSDTVVERRQYQAMGLSSAASERDSELANVEGLFDDSAGSGL
                     ADALSAFYSSFSSLASNPSDPTARAAVLNAAGALSGRINDTANSIASARADLFSKAKD
                     TAAEINQKAQKIAQLNQQIATAKAQGQDSANLQDQRSKVLLDLAPLVDVTTIAQDNGT
                     ILVQSSGTTLVDGIQARTLSVGLDTSGNMKISAAIGNGAGTDVTRYLTGGKLAGIKEA
                     RDTDLSAVATNLDNFAYAVATSVNTQHAAGYGLDGVTGRNLFSVTPSATGAARALAVS
                     ADVAGNPSAIAASSSKTALPGNSDNAVLLSGLSSLPTINGRSASEAYGDLVGDVGARK
                     QAAADDASIRDAVAAQATSARESTSGVSLDEEMVALSKYQRAYEASSKVITTIDQLLG
                     ELLNSVGR"
     gene            5451..6329
                     /locus_tag="VLJ38_15820"
     CDS             5451..6329
                     /locus_tag="VLJ38_15820"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41046.1"
                     /translation="MRVTDGMRQTNMVRTLGQLSSAQQDASNRALTGNRVNKPSDDPA
                     AAAELARIRASQAQTEAGLKAASTAESDLSLSESVLSQANELFTSARELAQEGTNASL
                     DAPTRANLANQVGQLKAQLVGLANSKGQTGYLFAGSQTSARPFDSSGNFSGDDDAHVV
                     DLGNGTPTAVNVSGARTFTAAGGRNVFDDLDQLQAALAANDPTAIANTFAGLEASRQQ
                     IVASQSDAGMRIDRLQTTQDILTQAKTALQTRQQTTAGADPYQAYSDLVTLGNSLEQA
                     VAVAKKVLDIGGLIQF"
     gene            complement(6383..7051)
                     /locus_tag="VLJ38_15825"
     CDS             complement(6383..7051)
                     /locus_tag="VLJ38_15825"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSU41047.1"
                     /translation="MTRHVPLHVTLRLVPGLPSLRRKAAFRVVREALAAARTGGVRVI
                     HYSIQSNHVHLLVEAQSTHGLARGMQALSIRLAKQLNRAFGRKGRVFADRFHARALKT
                     PLEVRRALAYVLNNFRRHADSKGPRLPLSFRDPMSSAHWFDGWDPEWVHAAPDKRALR
                     DPAPSLDAGVVAARSFLLRSGWRRHGLLQPFDVSDAEAKPKSRSPAGKKRRTADVRQP
                     RARS"
BASE COUNT         1461 a         2721 c         2494 g         1118 t
ORIGIN      
        1 ggaacgcaag cctacacgcg cgccggcaca ctgaagaccg acggcctcgg caacctcgtc
       61 acgaacgaag gccagctgct cgacccgccc atcacgatcc cgaacggctc gaccaacgtc
      121 tccatcgcgt ccgacggcaa agtcagcgtc accatgtcgg gcgaaacgac gccggtcgaa
      181 atcggtcaga tccagctcgc gaccttcttg aaccccgcgg gactcaaggc gctcgggcat
      241 aacctgttcg tcaagacgct cgcgagcggg gaaccgcagc agggcacggc ggggaccgac
      301 ggccgcggca cgctgctgca aggttcgttc gagcgctcga acgtcgacat cgtctccgag
      361 atgatcggca tgatcagcgc gcagcgcggg tacgagatga actcgaaggt catcaccacc
      421 gcggacgaca tgctgcgcgc cgccacgcag atgaagtgac ggccatgaga cacccttcgc
      481 tactcctcgc gttcttcgcc gtgctgccgc tcgccgcgcc cgcgagcgcg gaaaaccgcg
      541 tgagcatcga aggaccgacc gtgcgcgtgt ccgacatcga tcctgcggcc ccggcggagg
      601 tcgccgacat cgagctcggt cgcgcgccgc cgcccggcag ctcgcgcatc ttcacgcgcg
      661 ctgaaatccg ccagcgcatc cgcgaagccg gcgccgacgc ggcgcacgtg aacgtgcccc
      721 cgagcattcg cgtcgaagcg cccgccgaac actggcgccc cgaagaagtc gccgcgcgct
      781 ccgacgccgc cgtgcgcgcc gccctcccgc tcggcgtttc gctgatcaag ctcgacgccc
      841 agcgcagcat cgtcgtgccg ccgggcagca gcgtgaccag cgtcaagccc gtgattccgc
      901 acgccgtcgg ccgccacgac gtgaccgtgg tcgcggaagt gcggcgcaac ctcgagctcg
      961 tggcgcgcgc gccgctctcg ctcgtcgtgg acgtgggcga ggacgcgttc gcgcccgtgc
     1021 tgcgcaaggg cgaccgcatc acgctcatca tcgaacaagg caacgcgcgc atcggcgcgt
     1081 cgggtgtcac gctcgcggac gcgaacgtag gcgacgccat cttttgccgc gtcacgagca
     1141 cgggcaaagt gctcaaggcc aaggttcaga gccgcgacgt gggccgggtg gtggagctgt
     1201 gaaacgtcac gtgctcgggc tgtgtctgct cgccacgctc gccgcggcgt gcgggccggc
     1261 ccacatcgcg cccttcaccc cgaaagaacg caagtacgat ccgggcgcct acgcggcgac
     1321 gcaaaaagag tatcgccccg ccgtcggctc gatttacagc gaggcgcagt caggtttgct
     1381 cgaggacacg cgcgccctcc gggtcggtga cctcgtcgtc atccgcatca acgaaaaggc
     1441 ggacgctcaa ggcaacgcga cgacggacct caagaaggac acgtcgcggg ccgccggcat
     1501 ggacagcttc ctcgcgctca tgccgaagct ccagcgcatg aaccccaatc tcgatcccgc
     1561 gaagttgttc gcgctcgccg cgaaatccga cttcgccggc tcgggcaata cggcgcgttc
     1621 cggctcgctc cagggcaaca tcggcgtgca cgtgaagcgc gaaatgccga acggcgacct
     1681 ctatgtcgag ggcacgaaag tcgtgatgat caaccacgag gagtaccacc tctacgtctc
     1741 gggcgtcctc aggcccgccg acattcagcc ggacaactcg gtcgattcgt cgctgatcgc
     1801 agacgcgcgc gtcgagttca cgggccgcgg cgacatcaac gaccaggtcg aacgcggctg
     1861 gctcaccaag atcctcgacg tcgtcaaccc cttctgagcc atgcacgact tctctcgccc
     1921 cggtctacgc cgctttcgcg tgctgttcgc cgcgctgctc tgcgcgctcg gcgtcacgag
     1981 cggcgcgccc gccgcgcacg ccgaccacat ccgtgacctc tgcgacgtcg tgggcgcacg
     2041 cgacaaccag ctcgtcggct acggcgtcgt cacgggcttg aacggcacgg gcgacgacgt
     2101 ttccgtgccg ttcgccaagc agtcgctcga atcgctgctc cggcgcctcg gggtgcagat
     2161 ccccgaccag caggtgcggc tcaggaacgt cgcggccgtg atcgtgacca cgacgatccc
     2221 ggcgttcgtt cgctccggcg ggcggctcga cgtgacggtg tcgtcgatgg gtaacgcgcg
     2281 ttcgctgacg ggcggcgtgc tcgtgcagac ggcgctgcac ggcgccgatc ggcgcacgta
     2341 cgccgtcgcg caagggccgc tcgtcgtcgg cggattttcc gcttcggggt cgtcgggctc
     2401 gagcgtgcaa gcgaactcga cctcgacggc gcgcgtcccg aacggcgcct tggtcgagcg
     2461 cgaaatcccg atgagcccga accaaaacgg caagctcgtc ctcgccctgc gcgcccccga
     2521 tttcgcgacc gcgagccgcg tcgccgaagc gctgacgaag gatctcggca ccggcagcgc
     2581 ccgcgcgctc gacggcggcg cgatcgaagt caaaccaccg agctcgttca aggatcgctg
     2641 ggtcgagctc atcgcccacg tcggcgagct cgacgtcgac cccgttcaga acgcacgtgt
     2701 cgtcatcaac gaacgcaccg gcacgatcgt ggtgggcggg gaggtccggc tctcgcccgt
     2761 cgcgatcgcc cagggcggca tcaccatcac cgtgcacgag caaaaagacg tgtcacaacc
     2821 cgaagccttc tcgcagcgcg gcaagaccgc gatcgtcaac aactccgacg tgagcgcgga
     2881 ggagaagccg tcgaacggac tcgcctacgt cgaaggcgcg acgacgcttg ccgacgtcgc
     2941 caaggcgctc tcgatgctcg gcgtgagccc gcgcgatctc gcgagcatcc tgcaggcgct
     3001 caaggccgct ggcgcgctcc gcgccgaggt cgtcgttcaa tgaagccgct cgaagccgcc
     3061 tccgtcgcgc tgcaaaaacc tgacgcgccc ctacatcagc cgcaggccaa gccgagcgag
     3121 aaggcgatca aggccgcgcg cgacttcgag gcgatcatgg tgcgacacat gctcgagtcg
     3181 atgcagaaaa cgacggacat caacggcaag agccacgcga acaacggcta tcaatccatg
     3241 gcgaccgaag cgctcgccga cagcatcgcg aaaggcggcg ggctcggact ggccgacctc
     3301 attgcccata cgctcgagag cgaaatggga cgaggtaagc catgacgaac cggccgtctg
     3361 gccaatttgt ggtgatctct ctcaaggtgt tggctggccg accgtccatg cctgattgga
     3421 gattcccaat gcgatctgga gaaccatgaa aggaatttca ggaagccccg tcttggacgc
     3481 ctaccagcgg ttggctccag tcgggagtgc atcacaggtc aaggggccgg cgcccgtcgc
     3541 cagcaccccg agccacgccg aaaatgccga ggtgaagatc tcggccaaag cgcggggcat
     3601 ggccaccgac ggcgacgccg ccatcgatac gaccaaggtc aatgatctca agcaaaagat
     3661 cgcctcgggc gatttgaagc tcgaccatga caagatcgcg gcgcgcatgc tggagagggc
     3721 cggctaacat ggccaccgca cctgctcgcc agggggacga cggagcgctg ccgcccgtgt
     3781 tcgccgagct cgagcgggtg ctcgctgaag aagcgcgcgc gctacgcaag ctcgaccgcg
     3841 aaggcatcga gcgcgccgcc gaagagaagg ccaagctctg cgacgagctt gccgccgcgc
     3901 gtgctcaact gaaacccgcg cagcgccacg gcctcgaacg gatccgcaaa gccgcgctcc
     3961 aaaatcacat gctgctcgcc cacgcgcggg acagcgtgag gcaagtgctc ggtaccgcct
     4021 cggggcgacc agcgagcccc gtactcggcg gtttacgcct ggatttgcga ggctagcatg
     4081 ggactcacgc aaatcctgtc cacggcgctc gacgggctca acgctcagtc ggtcggcctg
     4141 tcgacgacgg gcgacaacat ttcgaacgtc aacactcccg gctacgcacg ccgcgaggtg
     4201 cagctcgaaa cgcgcggcca aggcctgacg ggcgtcaacg tcgcggggct acagcgcgtc
     4261 tccgacacgg tcgtggaacg ccgccagtat caggcgatgg gcttgtcgtc cgcggcatcc
     4321 gaacgcgact cggagctcgc caacgtcgaa gggctgttcg acgattcggc cggtagcggc
     4381 ctcgccgacg cgctctcggc attctactcg tccttctcgt cgctcgcgtc caatccgagc
     4441 gatcccacgg cgcgcgccgc cgtgttgaac gccgccggcg cgctctccgg ccgcatcaac
     4501 gacacggcca acagcatcgc ctcggctcgc gccgatctgt tcagcaaggc caaggacacg
     4561 gccgccgaaa tcaatcagaa ggcccaaaag atcgcgcagc tgaaccaaca gatcgcgacg
     4621 gccaaagcgc aaggccaaga cagcgccaat ctccaggacc agcgctcgaa ggtgctgctc
     4681 gatttggcgc cgctcgtcga cgtgacgacg atcgcgcagg acaacggcac gatcctcgtg
     4741 cagtcgtcgg gcacgacgct cgtggacggc atccaggcgc gcacgctgag cgtcggcctc
     4801 gacacgagcg gcaacatgaa gatcagcgcc gcgatcggca acggtgccgg aaccgacgtc
     4861 actcgttacc tcacgggcgg caagctcgcc ggcatcaagg aagcgcgcga caccgatctc
     4921 agcgccgtcg cgacgaatct cgataacttc gcgtatgcag ttgcgacgag cgtcaacacc
     4981 cagcatgcag ccggttacgg cctcgacggc gtgactggac gcaatctctt cagcgtcacg
     5041 ccgagcgcca cgggtgcggc gcgcgccctc gcggtgagtg ccgatgtcgc cggtaacccg
     5101 agcgccatcg cggcctcgag cagcaagacg gcgctgccgg gcaactccga caacgccgtg
     5161 ctcctctccg gcctctcgag cctgccgacg atcaacggcc gcagcgcgag cgaggcgtac
     5221 ggtgatctgg tcggcgacgt cggcgcgcgt aaacaagcgg cggcggacga cgcgtcgatc
     5281 cgggacgcag tggcggcgca ggcgacgtcg gcgcgcgaat cgacgagcgg cgtctcgctg
     5341 gacgaagaaa tggtcgcgct cagcaagtac cagcgcgcct acgaagcttc gtccaaggtc
     5401 attacgacga tcgatcaact gctcggcgag ctcctgaatt cggtgggtcg atgagagtca
     5461 cggacggcat gcggcagacg aacatggtgc gcacgctggg acagctcagc tcggcgcagc
     5521 aggacgcgtc caatcgcgcg ctcacgggca accgcgtgaa caagccgtcg gacgatccgg
     5581 cggccgccgc cgagctcgcc cgcattcgag cgagccaagc gcaaacggaa gccgggctca
     5641 aagccgcttc gacggccgaa agcgacctgt cgctctccga gagcgtgctc tcgcaggcca
     5701 acgagctttt cacgagcgcg cgcgaactcg cgcaagaagg caccaacgct tcgctcgatg
     5761 ctccgacgcg tgcgaacctg gcgaaccaag tcggccaact gaaggcccaa ctggtcggcc
     5821 tcgccaacag caaaggtcaa accggttatc tcttcgccgg cagccaaact tcggcgcggc
     5881 ccttcgactc gagcggcaac ttctcgggcg acgacgacgc gcacgtcgtc gacctcggca
     5941 acggcacccc gaccgccgtc aacgtcagtg gtgcccgcac cttcaccgcc gccggcggcc
     6001 gcaacgtctt cgacgacctc gaccagctgc aagcagcgct cgcggccaac gacccaaccg
     6061 cgatcgccaa cacctttgcc ggcctcgaag cgtcgcgcca acaaatcgtc gcctcgcaaa
     6121 gcgacgccgg catgcgcatc gaccgcctgc aaacgacgca agacatcctg acgcaggcca
     6181 aaaccgccct gcaaacgcgc cagcaaacca ccgccggcgc cgacccgtac caggcctact
     6241 ccgacctcgt cacgctcggt aactcgctcg agcaagccgt cgcggtcgcc aagaaggtgc
     6301 tcgacatcgg cggcttgatt cagttctgag gccggcagcg gggcgtcaca cgttcatgcg
     6361 cgtctcgttg cgtgcgtgca ttctacgacc gcgctcgagg ctgcctgacg tcagcagttc
     6421 ggcgcttctt accggcgggc gaccgggact tcggcttcgc ttcggcgtcc gaaacgtcga
     6481 acggctgcag cagtccgtga cgacgccagc cgctccgcag cagaaacgaa cgtgcggcga
     6541 cgacgcccgc gtcgagagac ggcgcaggat cgcgcaatgc acgcttgtcg ggcgcggcgt
     6601 gaacccactc cggatcccag ccgtcgaacc agtgcgcgga gctcataggg tcgcggaacg
     6661 agagcggtag ccgcggccct ttgctgtccg cgtgccggcg aaaattgttg agcacgtacg
     6721 cgagcgcgcg ccgaacctcg agcggcgtct tgagcgcgcg agcgtgaaag cggtccgcga
     6781 agactcgtcc ctttcgcccg aaggctcgat tgagctgctt cgcgagccgg atcgaaagcg
     6841 cctgcatgcc tcgcgcgagc ccgtgcgtac tctgcgcctc gaccagcaga tgcacgtgat
     6901 tggactgaat cgaataatgg atcacgcgca ccccgccagt tcgcgccgcc gcgagcgcct
     6961 cacgcaccac tcgaaaggcc gccttgcggc gcaaactcgg cagtcccggc acgagccgca
     7021 acgtcacgtg cagcggcacg tgtcgcgtca cgcgttccct cgtgaggtgc gaaacacgct
     7081 gcgaagagcg cggtcgcccc gcccctttcc gcgcgccgcc ccatgtgcgg aaccggagcg
     7141 cgacttgcgc ctgtttcctg gcgtggcgag tggcacgcgg agtccgtttg gaagtcgaca
     7201 cgtgaccgct tgaatatggc acatatgcgt atcgcacgca accgctcctg cgacgccggg
     7261 gggcgagcta gggtaaaaac cgggtacact cctgacacat cgagccgagg acaggcctga
     7321 cactcggttc gtgcaatccg aggacattcc tgacagtggc gcgcatgcct cggaaggaaa
     7381 tgaattcgat gaaggagctc gtgaagttcg tgttggaatg gggaaacgct ggagcgaggg
     7441 cgaagggcag ctcaatcgca gcgtcgcctc gaaagagacg gcgcgcgagt cgagccgttt
     7501 acccgcgccg tgggtcaggc gcgtcacggc gggcggcgtg aatacgagac gcgtgtcgtc
     7561 gaatgaaaag ccgtgcccac caattcaaat atcctcgagc tgcgcctccc gttggggaca
     7621 agcgttcgag ggcgcgtgct cgagaggcgc accggtcgag cttcgtctcg gcgacttccg
     7681 tcgaagatcg cgcgtgtagg tgcacctgcg tgcgccgtcg ccgccaagag ccatctcgcc
     7741 ttcgcgctcg cgtgtccgct gccgttgtcc gcgtgcgccg ccgtgacgcg tggt
//
LOCUS       DATIML010000912         7457 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5683541, whole genome shotgun sequence.
ACCESSION   DATIML010000912 DATIML010000000
VERSION     DATIML010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7457
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5683541"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..2091
                     /locus_tag="VLJ38_15830"
     CDS             127..2091
                     /locus_tag="VLJ38_15830"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU41048.1"
                     /translation="MRNENVIRAVIVGALGLVLALLVVLVAQTNHLEERLIVQAQQIR
                     ALGEATDRLAAGGVRVVGGGTPAAMDTAPPGVKFLHPDVPNFFKPKATHWPAPGANLE
                     GTLIRGWDTGDPKGFNPLLENSAYNTDLIENYVAYSLAGRNVWTNPSEWYGDLAYRAE
                     ITDDYKEFTFYLRPGVKWPAPVGVNLDDPAHAWLKGDHPLTADDFVFALDMVMDPNVE
                     SGPNRNYYSNLASWKALDPTTLVLRWKAKEFNNLPQSMVIEPLPRFIYTRDEHGVEFP
                     KEAVGTNFNQHWYNNKGFLGAGPYTMTRYEPGAKLVLTRNEAFPGEKPAIKSIVYPIY
                     TDSALTPLKLKAHELNLADLTPTQYRELILQYKQSGHPPPNSPFFNGDILCEPVELSS
                     YRYLAWNADRPMFSDKRVRRAMTMAFDRKRILDNVWVGLGTLITGPFPPSTPYNDPSV
                     APIPFDLEGAKKLLAEAGWQDTDGDGLLDKAFQPGEPRKPFEFTFLVALGPKETMVLA
                     NILRDDLLKIGVKMKLETAEWSLFLKRTDEKNFDAYAAAWTTGWEPDLYQIWHSSQAD
                     VAKGSNRVGFRNKEADKIIEQLRETFDQDERIKLCRAFHRIVADEQPYSFFSTKKVVV
                     CHWKEVQNVSFAKTFPNENALPWSVQRTEQ"
     gene            2177..3619
                     /locus_tag="VLJ38_15835"
     CDS             2177..3619
                     /locus_tag="VLJ38_15835"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU41049.1"
                     /translation="MKAYVLRRLLLMIPTFFGISLILFLILNLAPGRPGAQQSADLSQ
                     SMRGEVTAESYKIFREQFHLDKPVLFNTRFTLTREEVRAKVSAAAGIGQTTAAERVHA
                     QEELEDLGASAVPYLVSLLDAPDPKLRDAATYFLRIDTTRPLITPFDPRPSPEVRAQN
                     RAISEENAELRTLRYGPEDDDAKKHAVIDAWKRWFLAHRARFEHGTRDKLAMFFFDTR
                     FAAYWHNLVRLDFGVSLTSREPVTRTLVSKLKYSLTLSVGSLVLAYLIAIPLGVFSAV
                     KKGSRADRALTLLLFMLYSLPSFFVATLLLYFLSQASAWESLRWFPIGGWQSSDASEL
                     TTLGQWRDVAWHLVLPTICMTYGSLAALSRYMRSGLLEVIQADYVRTARAKGLSERVV
                     IGKHALRNGLLPILTLLAGLLPAVLGGSVIIEYIFGIQGMGLWVVDAINQRDYNVILA
                     VELFSTVLVLVGLLLTDLSYALVDPRIRYE"
     gene            3616..4854
                     /locus_tag="VLJ38_15840"
     CDS             3616..4854
                     /locus_tag="VLJ38_15840"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU41050.1"
                     /translation="MSALETATVQRTSYYSIVWRELKKDRLALLGLWAVLGLVAAAVG
                     APLVSQDQPFLYVESGHWSSPWLRGLFDRLVFESSVDIFFNLLLVLAPAYALVRFVLA
                     RVLGQGLAAREKRLAQGFGIGFVALFLAVTPATLGGAENPLHYSHQVENYRAKVAAAR
                     AAHRDVHAIFPLHHYSYRETNPAESLVPPNGEHWLGTDTEGRDVFARMLYGTRISLSI
                     GVVAVALYVFLGVVVGALAGYFGGWVDSALSRLIEVMICFPTFFLILTLAALIRERSI
                     FHVMFIIGITSWTGVARLVRAEFLKHKGLEYAQAARALGIPVRRIIFGHILPNASAPV
                     LVSATFGIASAILVESSLSFLGIGDPTVASWGETLNAGRVDNRLWLILAPGFAIFFVV
                     TVFNLVGEGLRDALDPKLRR"
     gene            4855..5904
                     /locus_tag="VLJ38_15845"
     CDS             4855..5904
                     /locus_tag="VLJ38_15845"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU41051.1"
                     /translation="MDSPLAAEEPLLRIANLSVHFRTSAGVVRAVDGVNYDVRRGETL
                     AVVGESGCGKSVTAMAVLGLLPRPPAEIPQGSIVFAGEELVGAHPDRLREIRGDRISM
                     IFQEPMTSLNPVFTIGDQIMEGLVLHRGLARDAARREAARLLELVRIPAGEQRLDEYP
                     HQLSGGMRQRVMIAMALACRPELLIADEPTTALDVTVQAQILDLLGQLQRELGMSIVL
                     ITHDLGVVAETAARVVVMYAGTVVERASVLSLFERPRHPYTAGLFLSLPSHAEGADAL
                     RPIEGSVPDPLHPPSGCRFHPRCPFAMPVCRERDPVLTPRESLGEPPHQSACFYVDEH
                     PEADLVALTKKGGER"
     gene            5901..7430
                     /locus_tag="VLJ38_15850"
     CDS             5901..7430
                     /locus_tag="VLJ38_15850"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HSU41052.1"
                     /translation="MSTPLLRVEGLTKHFPVTRGVLGRIVGQVRAVDGVSFDIARGET
                     LGLVGESGSGKTTVGRSILRLIEPTAGNVVFDGIDVRHADPSTLRQLRRSMQIIFQDP
                     YSSLNPRLRVLDLIGEALEVHGLARGPAAEKRVAELLTRVGLAPGAINRYPHEFSGGQ
                     RQRIGVARAIALEPKLIVCDEPVSALDVSIQAQVVNLLKDLGRELGLSYLFIAHDLSV
                     VRHLSHRIAVMYLGELVELAPGERLFSAPAHPYTRALLSAVPVPDPRRRRRRSVLEGD
                     LPSPMSPPSGCRFHTRCPAVMERCRTEPPPVYRPEPGHEVRCFHSEGASGDGWYAEVD
                     ARIEAQTAQNQRATPAPPRVQLEPRLADAAPGVRDIAAASPAHGRRSTRHAPPRISAS
                     RRTKALYVLPFMLLGAFFLARSAFRDIAAQRELKALSAELVAKATLTGALPASIADLG
                     WRLPPLFGPTGALDPWGHSFRYRVLPGGNGFELATLGPDGVKSSDDQLVVRRLTFPAR
                     R"
BASE COUNT         1216 a         2591 c         2345 g         1305 t
ORIGIN      
        1 gcggccagct cgcggcgcgc ggcccctgag cccacgcgcg ctcgcgccca cacgtccggc
       61 atttccgcgc cagcgcgagg tttcggcgct tgcagcgcgc tgcgccttct ggaacgctcc
      121 gggcgaatgc gaaacgagaa cgtgattcgc gccgtgatcg tgggcgcgct cgggctcgtg
      181 ctcgcgcttc tcgtcgtgct cgtcgcgcag acgaaccacc tggaggagcg cctgatcgtg
      241 caggctcaac agatccgagc gctcggtgaa gcgacggatc gcctcgcggc cggtggcgtg
      301 cgcgtcgtgg gcggcggaac gccagcggcg atggatacgg cgccgccggg cgtgaaattt
      361 ctgcaccccg acgtgccgaa cttcttcaag cccaaggcga cgcattggcc ggcgcctggc
      421 gcaaacctcg aaggcacgct gattcgcggc tgggacacgg gcgaccccaa gggcttcaat
      481 ccgctgctcg agaacagcgc ctacaatacc gatctcatcg aaaactacgt ggcttactcg
      541 ctcgcgggca ggaacgtttg gacgaacccg agcgagtggt acggcgacct ggcgtaccgc
      601 gccgagatta cggacgacta caaggagttc accttctacc tgcgtccggg cgtgaagtgg
      661 cccgcgcccg tgggcgtgaa tctcgacgac cccgcgcacg cctggctcaa aggtgatcac
      721 ccgctcaccg cggacgattt cgtgttcgcg ctcgacatgg tgatggatcc caatgtcgag
      781 agcgggccta accgcaacta ctactcgaac ctcgccagct ggaaggcgct cgacccgacg
      841 acgctcgtcc tccgctggaa ggcgaaagag ttcaataatc taccgcagag catggtgatc
      901 gagccgctgc cccgcttcat ctacacgcgc gacgaacacg gcgtggaatt ccccaaagag
      961 gcggtcggca cgaacttcaa ccaacactgg tacaacaaca agggcttcct cggcgccggc
     1021 ccgtacacca tgacgcgcta cgagcccgga gcgaagctcg tactcacgcg caacgaagcc
     1081 ttccccggcg agaagcccgc catcaagtcg atcgtttacc caatctacac cgatagcgcg
     1141 ctcactcccc tcaagctgaa agcgcacgaa ctcaacctcg ccgatctcac acccacgcaa
     1201 tatcgggagc tcatcctaca atacaagcaa tcgggacacc cgccgccgaa cagtcccttc
     1261 ttcaacggcg atatcctgtg cgaaccggtc gagctgtcct cgtaccgtta tctcgcctgg
     1321 aacgccgatc gcccgatgtt ttcggacaag cgagtgcggc gcgccatgac gatggcgttc
     1381 gatcgcaaac gcatcctcga caacgtctgg gtcggactcg gcacgctgat cacgggacct
     1441 ttcccgccct cgacgcccta caacgacccg agcgtcgcac cgattccatt cgatctggag
     1501 ggcgccaaga aactcctcgc cgaggcgggc tggcaggaca ccgacggcga cggtctactc
     1561 gacaaggcat tccagccggg agagccccgc aagcccttcg agttcacgtt cctcgtcgcg
     1621 ctcggcccga aagagaccat ggtcctcgcc aacatcttgc gcgacgatct cttgaagatc
     1681 ggcgtgaaga tgaagctcga gaccgccgag tggagcttgt tcttgaagcg gacggacgaa
     1741 aagaacttcg acgcctacgc cgccgcctgg accactggct gggagcccga tctctatcaa
     1801 atctggcact cgtcacaggc agacgtcgcg aagggctcga accgcgtggg ctttcgcaac
     1861 aaggaagcag acaaaatcat cgagcagctg cgcgagacgt tcgaccaaga cgagcgcatc
     1921 aaactctgtc gcgcctttca tcgcatcgtg gccgacgagc agccctacag cttcttttcg
     1981 acgaagaagg tcgtggtctg ccattggaaa gaggtacaga acgtcagctt cgccaagaca
     2041 tttccgaacg aaaacgcgct cccgtggtcg gtgcaacgca cggagcagta agcgtgagct
     2101 cgcacgcgag ggcccgggtt gagcgagctg cgttcggacg acgggggcgg acgagcggcg
     2161 ctgcgcgagg cggctgatga aagcctacgt cctccgccgc ctgctcctca tgatcccgac
     2221 gttcttcggg atatcgctga ttcttttttt gattttgaat ctcgcgccgg ggcgcccggg
     2281 cgcgcagcag agcgccgatc tttcgcagag catgcgcggc gaagtgacgg ccgagtcgta
     2341 caagattttt cgcgagcaat ttcacctcga caaacccgtg ctcttcaaca cgcgcttcac
     2401 gctcacgcgt gaggaggtgc gcgccaaggt gagcgccgcg gccggcatcg ggcagacgac
     2461 ggcggccgag cgcgtgcacg cgcaggagga gctcgaggat ctcggcgcgt ccgccgtgcc
     2521 gtacctcgtg agcttgctcg acgcaccgga tccgaagctc cgcgacgccg cgacgtattt
     2581 tttgcgcatc gacaccacgc ggccgctgat cactcccttc gacccgcgtc caagccccga
     2641 ggtccgcgcc caaaaccgcg ccatcagcga agaaaacgcc gaactccgca cgctccgtta
     2701 cggccccgag gacgacgacg cgaagaagca cgccgtgatc gacgcgtgga agcgctggtt
     2761 tctcgcacac cgcgcgcgct tcgagcacgg cacgcgcgac aagctcgcga tgttcttctt
     2821 cgacacgcgc tttgccgcct actggcacaa cctcgtgcgg ctcgatttcg gcgtatcgct
     2881 cacgagccgc gaacccgtga cacggacgct cgtttcgaag ctcaagtact cgctcacgct
     2941 ctcggtcggc tcgctcgtgc tggcctacct gatcgcgatc ccgctcggcg tcttttcagc
     3001 ggtgaagaag ggctcgcgcg ccgatcgcgc gctcacgttg ctgctcttca tgctgtattc
     3061 gctgccgagc ttcttcgtcg cgacgctctt gctctacttc ctctcgcaag cgtcggcgtg
     3121 ggaaagcttg cgctggttcc cgatcggcgg ctggcagagc tcggacgcga gcgagctcac
     3181 gacgctcggt cagtggcgcg acgtcgcttg gcacctcgtc ttgcccacga tttgcatgac
     3241 gtacggctcg ctcgcggcgc tcagccgcta catgcgctcg ggcctgctcg aagtgattca
     3301 agcggattac gtgcggacgg cgcgcgccaa gggcttgagc gagcgcgtgg tcatcggcaa
     3361 acatgcgctg cgtaacggcc tcttgccgat tctcaccttg ctcgcggggc tcttgccggc
     3421 cgtgctcggc ggctccgtca tcatcgagta catcttcggc attcagggca tggggctctg
     3481 ggtcgtcgac gccatcaatc agcgcgatta caacgtgatc ctcgcggtcg agctgttctc
     3541 gacggtgctc gtgctcgtgg ggctcttgct caccgatctg agctacgcgc tcgtcgatcc
     3601 gaggatccgt tacgaatgag cgcgctcgag acggccaccg tgcagcgtac gagctactac
     3661 tcgatcgtct ggcgtgagct caaaaaagac cgcctcgcgc tgctcgggct gtgggcggtg
     3721 ctggggctcg tggccgccgc cgtgggcgcg ccgctcgtct cgcaggatca gccgtttctg
     3781 tacgtcgagt ccggccattg gtcgtcgccg tggctgcgcg gactcttcga tcgactcgtg
     3841 ttcgagagct cggtcgacat cttcttcaat ctgctgctcg tgctcgcccc cgcctacgcg
     3901 ctcgtgcgct tcgtgctcgc gcgcgttctc ggacaaggct tagccgcgcg agaaaaacgt
     3961 ctcgcgcagg gcttcggcat cggcttcgtg gcgctcttcc tcgccgtgac gccggcgacg
     4021 ctcggcggcg ccgagaaccc cctgcactac tcgcatcagg tcgaaaacta ccgcgccaag
     4081 gtcgccgccg cgcgcgccgc gcaccgcgac gtgcacgcga ttttccccct gcatcactac
     4141 agctaccgcg aaacgaatcc cgccgagagt ctcgtcccgc cgaacggcga gcactggctc
     4201 ggcaccgaca ccgagggacg cgacgtgttc gcgcgcatgc tctacggcac gcgcatctcg
     4261 ctcagcatcg gcgtcgtggc ggtggcgctc tacgtcttcc tcggcgtcgt cgtcggcgcg
     4321 ctcgcgggtt acttcggcgg ctgggtcgat tcggcgctca gtcgcttgat cgaagtgatg
     4381 atctgcttcc cgacgttctt cttgatcctg acgctcgcgg cgctgatccg cgagcgcagc
     4441 atctttcacg tgatgttcat catcggcatc acgagctgga cgggggtggc gcggctcgtg
     4501 cgcgccgagt tcttgaagca caagggcctg gaatacgcgc aggccgcccg cgcgctcggt
     4561 attcccgtgc ggcgcatcat cttcggccac attttgccga acgcaagcgc gcccgtgctc
     4621 gtgagcgcga ctttcggcat cgcgtcggcc atcctcgtcg agtcgagcct ctccttcctc
     4681 ggcatcggcg accctaccgt cgcgagctgg ggcgaaaccc tgaacgccgg gcgcgtcgac
     4741 aaccggctct ggctcatcct cgcgccgggc ttcgccatct tcttcgtcgt gaccgtgttc
     4801 aacctcgtgg gcgaaggctt gcgcgacgcg ctagatccca agctgagacg ttagatggac
     4861 tcgccgctag ccgcagagga gccgctgctt cgcatcgcga acttgtccgt gcattttcgg
     4921 acgagcgcgg gcgtcgtgcg cgccgtcgac ggcgtgaatt acgacgtgcg gcgcggcgag
     4981 acgctcgccg tcgtcggcga gtccggctgc gggaaatcgg tcacggcgat ggcggtgctc
     5041 ggcctgttgc cgcggccgcc cgccgagatc ccgcagggtt cgatcgtgtt cgccggtgaa
     5101 gagctcgtcg gggcgcaccc ggatcggctg cgcgagatcc gcggcgatcg catttcgatg
     5161 atttttcaag agccgatgac gagcctgaac cccgtcttca cgatcggcga tcagatcatg
     5221 gagggcctcg tgctccatcg cggactcgct cgcgacgcgg cccgacgcga agccgcgcgc
     5281 ttgctcgagc tcgtgcgcat ccccgcgggc gagcaacgct tggacgagta tccgcaccag
     5341 ctttcgggcg gcatgcgcca gcgcgtcatg atcgcgatgg cgctcgcgtg ccggccggag
     5401 ctgctcatcg ccgacgagcc cacgacggcg ctcgacgtca cggtccaggc ccaaattctc
     5461 gacctgctcg ggcagctgca gcgcgagctc ggcatgtcca tcgtgctcat cacgcacgat
     5521 ctcggcgtcg tggcggaaac ggcggcacgc gtggtcgtga tgtacgccgg caccgtggtc
     5581 gagcgcgcga gcgtgctctc gctgttcgag cggccgcgcc atccctacac ggcggggctc
     5641 ttcttgtcgc tgccgagcca cgctgagggc gcggacgcgc ttcgacccat cgagggcagc
     5701 gtgccggatc cgctgcatcc accgagcggc tgccgttttc acccgcgctg cccgttcgcg
     5761 atgcccgtgt gccgcgaacg ggatcccgtg ctgacacctc gtgagtcgct cggcgagccg
     5821 ccgcatcagt cggcgtgctt ttacgtcgac gagcaccccg aggctgacct cgtcgcgctc
     5881 acgaaaaaag gcggcgagcg atgagcacgc cgctgctgcg cgtcgaagga ctcaccaagc
     5941 acttccccgt cacgcgcggc gtgctcgggc gcatcgtggg tcaggtgcgc gccgtcgacg
     6001 gcgtctcctt cgacatcgca cgcggtgaaa cgctcggtct cgtcggcgag tccggctccg
     6061 gcaagacgac ggtggggcgc tcgatcttgc gcctgatcga gccgacggcc ggcaacgtcg
     6121 tcttcgacgg catcgacgtc cggcacgccg acccgagcac gttgcggcag ctccgccgct
     6181 cgatgcagat catctttcaa gatccctaca gctcgctcaa tccgcgcctg cgcgtcctcg
     6241 atttgatcgg agaagcgctc gaggtccacg gcctcgcgcg cggcccggcg gcggaaaagc
     6301 gcgtcgccga gctgctcacc cgtgtcggcc tcgcgccggg cgccatcaat cgctacccac
     6361 acgaattttc gggcggccaa cgccaacgca tcggcgtcgc gcgagcgatc gcgctcgagc
     6421 cgaagctcat cgtgtgtgac gagcccgtgt ccgcgctcga cgtctcgatt caggcgcaag
     6481 tcgtgaatct cttgaaggac ctcgggcgcg agctcgggct ctcgtacctg ttcatcgcgc
     6541 acgacttgtc ggtcgtgcgc cacctttcgc accgcatcgc cgtcatgtac ctcggagagc
     6601 tcgtcgagct cgcgccgggc gagcggctct tcagcgcccc cgcgcatccc tacacgcgcg
     6661 cgctgctttc ggccgtgcca gtaccggatc cgcgccggcg gcgccggcgc agcgtgctcg
     6721 aaggcgatct gccgagcccg atgtcgccgc cgagcggctg tcgtttccac acgcgctgcc
     6781 cggccgtgat ggagcgctgt cgcactgagc cgccgcccgt gtatcggccg gagccgggcc
     6841 acgaggtccg gtgctttcac agcgaaggcg cgagcggcga cggctggtac gccgaagtgg
     6901 acgcgcggat cgaagcgcaa acggcgcaga accagcgcgc gacaccggcc ccgccgcgcg
     6961 ttcagctcga gccgcgcctc gccgatgcag cgccgggcgt gcgcgacatc gccgccgcct
     7021 cacccgcgca cggcagacga tccacgcgac acgctccgcc caggatcagc gcgtcgcggc
     7081 gcaccaaagc tctgtacgtc ttgccgttca tgctgctcgg cgctttcttc ctcgcgcgct
     7141 ccgcctttcg agacattgcc gcacagcgcg agctcaaagc gttgagcgcc gagctcgtcg
     7201 ccaaagcgac gctcacgggt gcgcttcccg ctagcatcgc ggatctcggc tggcggctgc
     7261 ctccgctctt cggcccgacg ggcgcgctcg acccctgggg ccactcgttc cgctaccgcg
     7321 tgctcccggg cgggaacggc ttcgagctcg cgacgctcgg tcccgacggc gtgaagagca
     7381 gcgacgatca gctcgtcgta cggcggctta cgttccccgc gcgacgctga acggccaggt
     7441 tacgatcgga cagagag
//
LOCUS       DATIML010000913         2518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4819578, whole genome shotgun sequence.
ACCESSION   DATIML010000913 DATIML010000000
VERSION     DATIML010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4819578"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1042)
                     /locus_tag="VLJ38_15855"
     CDS             complement(<1..1042)
                     /locus_tag="VLJ38_15855"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSU41053.1"
                     /translation="MQNRLANETSPYLLQHAHNPVDWYPWGEEALLRAKREDKPIFLS
                     IGYAACHWCHVMEKESFEREEVARLLNEGFVSIKVDREERPDLDEIYMAATVAVSGSG
                     GWPMSVFLDTEQRPFFAGTYFPPVERWGKPSFSTLLSRITELWRTNRGALSEQATQLV
                     AHVRAQFETETRASVGADANATAARELARTFDPTFGGFGSAPKFPPCAALALLLRHHH
                     ATGDEHALGMVRRTLDAMKDGGIYDQLGGGFARYSTDERWLVPHFEKMLYDNALLARA
                     YLHAFQVSDEPLFRRVCEETLDWAIRELRQDEGGFASSLDADSEGVEGKYFVWTLDQV
                     QSLLPREAAEYFA"
     gene            1137..2477
                     /locus_tag="VLJ38_15860"
     CDS             1137..2477
                     /locus_tag="VLJ38_15860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41054.1"
                     /translation="MKLPGASRYGVLGFLVVMSALDGACGRTDVWYRDDAYGAQGGSH
                     LIGGTGGKAGSGTGKGGTGSGAVSTGGTSVTGGTGGSFGTGGSVGIGGTFGAGGSNGG
                     GSGRGGSPGFGGRSAGGRGGAGNAGRSGAAGTAGAGATGPFACPGTLPTCDRYTNFAL
                     TNDITWGSGAFTGGIAVFGSGIYRVGDTSQIHVAGSVDGYGNGFVIWFTTCSDLRNAT
                     GVFFTATGTTDFMDQVQFSPMVNSDYPWQSAPENGKGACTSSNPSDPWGDCVLPYRNV
                     LLSTQPQSIYWTSVVGGAPVAWNANTSPGELIGLQWLFPYDANVGAYDIDVTLDNVGF
                     IDANPSAVDCGYTLGAGGAGGMGGAAGFGGTAGFGGVPVAGATSSGGVSFGGASNAGF
                     GGLGGASGIGGLSGFGGASGFGGFAGTTQTGGIGGLAGQSGSSAGSVAAGAAGL"
BASE COUNT          386 a          805 c          911 g          416 t
ORIGIN      
        1 aggcgaaata ttcggcggct tcgcgcggca agagcgactg gacctggtcg agggtccaca
       61 cgaaatactt gccttcgacg ccctcgctgt cggcgtccag cgacgaggcg aagccgccct
      121 cgtcctggcg cagctcacgg atcgcccagt cgagcgtctc ctcgcacacg cgccggaaga
      181 gcggctcgtc agagacctgg aacgcgtgca ggtacgctcg cgccagcagc gcgttgtcgt
      241 agagcatctt ctcgaagtgc ggcacgagcc agcgctcgtc cgtcgaatag cgcgcgaacc
      301 cgccgccgag ttgatcgtag atgccaccgt ccttcatggc gtcgagcgtg cggcgcacca
      361 tgccgagcgc gtgctcgtca ccggtcgcgt ggtggtgccg caggagcagc gcgagcgcgg
      421 cacacggcgg gaatttcggc gcactgccga agccgccgaa cgtcggatcg aacgtgcgtg
      481 cgagctcgcg cgccgccgtc gcgttcgcat cggcgcccac gctcgcgcgc gtctccgttt
      541 cgaattgcgc gcgcacgtgt gcgacgagct gcgtggcttg ctcgctgagc gcgccgcggt
      601 tcgtgcgcca gagctcggtg atgcggctga gcagcgtgct gaagctcggc ttgccccagc
      661 gctccacggg cggaaaatac gtgccggcaa aaaagggccg ctgctcggtg tccaagaaca
      721 cgctcatcgg ccagccaccg ctgcccgaga cggcgaccgt ggccgccatg taaatctcgt
      781 cgagatcggg gcgttcctcc cgatcgacct tgatgctcac gaaaccttcg ttcaacaggc
      841 gcgccacctc ctcgcgttcg aaactttctt tctccatcac gtggcaccag tggcaagcgg
      901 cgtagccgat gctcagaaaa atcggcttgt cctcgcgctt ggcgcgcaaa agtgcctctt
      961 cgccccaggg gtaccaatcc accgggttat gcgcgtgttg gagcaggtac ggactcgttt
     1021 cgttcgctag acgattttgc acgggcttga ctccggcgat cgatgcttcc gagagtggct
     1081 cattcgagac tggtggtagg ctagcgcccg tggagaggaa aagaagccgt tcgcgcgtga
     1141 agctgcctgg ggcgagtcgc tacggagtgc tcgggtttct cgtcgtcatg tcggcgctgg
     1201 acggcgcgtg cgggcgcacg gacgtttggt atcgcgacga cgcatacggc gcgcagggcg
     1261 gcagccacct catcggcggc acgggcggta aggcgggcag cggcacgggc aaaggcggca
     1321 cgggaagcgg cgcggtgagc accggcggaa cgagcgtcac tgggggcacg ggtggcagct
     1381 tcggcacggg tggcagcgtc ggaataggcg gcaccttcgg cgcgggcggc tcgaacggtg
     1441 gcgggtccgg ccgcggcggt agcccgggtt tcggcggtag gtcggccggc ggcagaggcg
     1501 gcgcaggtaa cgcgggcagg agcggcgccg ctgggactgc gggcgccggc gccacgggcc
     1561 cgttcgcgtg tccgggcacg ctgccgacgt gcgatcgtta cacgaacttc gcgctcacga
     1621 acgacatcac ctggggcagc ggcgccttca ctggcggcat tgccgtgttc ggcagcggca
     1681 tctaccgcgt tggcgatacc tcacaaatcc acgttgccgg cagcgtcgac ggctacggta
     1741 atggcttcgt gatctggttt acgacgtgct ccgatctccg gaacgccacc ggcgtcttct
     1801 tcacggcgac gggcacgacc gacttcatgg accaggtgca gttctcaccg atggtgaact
     1861 cggactaccc gtggcaatcc gcacccgaga acggcaaggg cgcgtgcact tcgtcgaatc
     1921 cgtccgatcc ttggggcgac tgtgtgctgc cgtaccgcaa cgtcctgctc tcgacccagc
     1981 cacagtcgat ctattggacg agcgtcgtcg gcggcgcccc cgtggcgtgg aacgcgaaca
     2041 cgagcccggg tgagctcatc ggcctacagt ggctcttccc atacgatgcc aacgtcggtg
     2101 cgtacgacat cgacgtgacg ctcgacaacg tgggtttcat cgatgcgaac ccgagcgccg
     2161 tcgattgcgg gtacacgctc ggtgcgggtg gcgcgggcgg catgggcggt gcggcgggct
     2221 tcggcggtac cgccggcttc ggcggtgtac cggtggcggg cgcgacgagc agcggcggcg
     2281 tgagcttcgg cggtgcgagc aacgccggct tcggcgggct cggcggagcg agcggcatcg
     2341 gcggcctgag cggcttcggt ggcgcgagcg gcttcggcgg atttgctggc acgacgcaga
     2401 cgggcggcat cggcggcctg gcgggtcaga gcggctcgtc ggcgggcagt gtcgcggcgg
     2461 gcgccgccgg gctctgagtg cgtatcagtt cggtggctgc catccgccga gcacggcg
//
LOCUS       DATIML010000914         1968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3370469, whole genome shotgun sequence.
ACCESSION   DATIML010000914 DATIML010000000
VERSION     DATIML010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3370469"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..989
                     /locus_tag="VLJ38_15865"
     CDS             <1..989
                     /locus_tag="VLJ38_15865"
                     /inference="COORDINATES: protein motif:HMM:NF041518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="choice-of-anchor Q domain-containing protein"
                     /protein_id="HSU41055.1"
                     /translation="DPKFVAGPADLHLGAGSPCIDAGDATTGPDHDFERTARPLDGDD
                     NGSALPDLGAYELFHRALCGDGHVDAGEACDDGDANGSPGFCDVACSLVPGSAGPTGS
                     GGVASSGVAGSAGNAAALAGSGGAPSAPGASGTPGASGTPAASGASGGSIGSVLPGGA
                     REGDAGAAGEQSTENAAGAAGATSASGDTSEHPTAGGDTSEHPSASGDTSEHPSANGG
                     SGSHGAAQSSSAGALPSGAAPSRCHPDEESTCHCPDGSTGVAQCESDGTLVCYCTVSS
                     RGGAGSSAALPADAAGCACRVAPSRRSDSAWFGALLLAWLGHRRRARRTVRP"
     gene            complement(1028..1573)
                     /locus_tag="VLJ38_15870"
     CDS             complement(1028..1573)
                     /locus_tag="VLJ38_15870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41056.1"
                     /translation="MTKSVLSVSVFALLLAACSGAAHPQASSLAHGPDCRGGSIHSDA
                     ELARLEHCVAIEGDLQVSGVTTLKSLARLREVTGTLAIGPTERLVALAGLERLEAVGT
                     LVLTRNRALIDARALNGLHRSEHVRVGGNPRLSKSFGFLEGLPVRDAKLELSHNIGLE
                     AEGLRPAGQAKQLGTLASLDH"
     gene            complement(1761..>1968)
                     /locus_tag="VLJ38_15875"
     CDS             complement(1761..>1968)
                     /locus_tag="VLJ38_15875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU41057.1"
                     /translation="DVLLPLRQRVLDQTELEYNAMAVGVFQLLQAKREEVETARVYVE
                     LLREYWSARIQVERLQAGRVKSER"
BASE COUNT          302 a          668 c          707 g          291 t
ORIGIN      
        1 tggatccgaa gttcgtcgcg ggcccggccg atctgcacct cggggcgggc agcccgtgca
       61 tcgacgccgg cgacgcgacg acaggtccgg atcacgactt cgagcgcacg gctcggccgc
      121 tcgacggcga cgacaatggc agcgcgctgc cggacctcgg cgcctacgaa ctgttccatc
      181 gcgctctctg cggtgacgga cacgtcgatg cgggcgaagc gtgcgacgac ggtgacgcca
      241 acgggagtcc tgggttttgc gatgtcgcct gctcgctcgt tcccggcagc gccggcccta
      301 cgggcagcgg aggagtcgcg agctccgggg tagcaggcag cgcaggcaac gccgcggcgc
      361 tcgcgggcag cggtggcgcg ccgagtgcgc cgggtgcatc aggtacgccg ggtgcgtcag
      421 gtacgccggc tgcgtcgggt gcatcgggtg gaagcattgg ttcggtcctg cccggagggg
      481 ctagggaagg cgatgcgggt gcggccggcg agcaatcgac cgaaaatgcg gccggcgccg
      541 caggcgcgac gagcgcgagc ggtgacacga gcgagcaccc gaccgcgggc ggtgacacga
      601 gcgagcaccc gagcgcgagc ggcgacacga gcgagcaccc gagcgcgaac ggcggctccg
      661 gcagtcacgg ggcagcccag tcgagcagcg ctggagccct gccctccggc gcggccccga
      721 gtcgctgtca ccccgacgag gagagcacct gtcattgtcc cgacggttcg acgggcgtag
      781 cgcagtgcga aagcgacggc acgctagtct gctactgcac cgtgtcgtcg cggggcggag
      841 ccggttcatc cgccgcgctg cctgcggatg ccgcgggctg cgcctgtcgc gtcgcaccga
      901 gccgtcgttc cgacagcgct tggttcgggg cactcctgct cgcatggctc gggcaccggc
      961 gtcgcgcccg ccgaaccgtg cggccctgaa gcggcgcagc cccgcgcgca tcgcgtcgcg
     1021 ccttacatca gtgatcgagg ctcgccaaag taccaagttg tttcgcctgg cccgccggtc
     1081 gcaggccttc ggcctcgagc ccgatgttgt gcgagagttc gagcttcgcg tcacgaaccg
     1141 gcaaaccctc gaggaagccg aacgacttcg agaggcgggg attgccgccg acgcgcacgt
     1201 gctcgctccg atggagaccg tttagggcgc gcgcgtcgat gagtgcccgg ttccgcgtga
     1261 ggacgagtgt gcccacggcc tcgagccgct cgagcccggc gagcgcgacg agccgttcag
     1321 tcggcccgat cgcgagcgtg cccgtcacct cgcgcaagcg cgccaaggac ttcagcgtcg
     1381 ttacgcccga gacctgcaga tcgccttcga tcgcgacaca gtgctccaag cgcgcgagct
     1441 cggcgtcgct gtgaatcgag ccgccgcggc agtccggccc gtgtgcgagc gacgaggcct
     1501 gagggtgcgc cgcgcccgag caagccgcga gcaggagcgc gaagaccgac acggaaagca
     1561 ctgatttcgt catgatgacg agacactctg cagcccgcgt gccaacggcg aatgcgcgtt
     1621 ttaagcgcac attttcggcc gttcgcgtcg ggttcgcgtc cgttgcgcaa gcgggtagcg
     1681 caactcgcgc actcgatttg ctcgctcgtt gcgcaagcac ctgccggctc gagcagcgag
     1741 gtgccgggct ttccctatat ttagcgctcg gacttgacgc gcccggcctg gagccgctcc
     1801 acctggatgc gcgcgctcca gtactcgcgc aagagctcga cgtacacgcg cgccgtttcg
     1861 acttcttcgc gcttggcttg gaggagctgg aaaacgccga cggccatcgc gttgtattcg
     1921 agctcggtct ggtcgagcac gcgctggcgt agcggcaaga gcacgtcg
//
LOCUS       DATIML010000915         2745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4820090, whole genome shotgun sequence.
ACCESSION   DATIML010000915 DATIML010000000
VERSION     DATIML010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2745
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4820090"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VLJ38_15880"
     CDS             <1..557
                     /locus_tag="VLJ38_15880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HSU41058.1"
                     /translation="SVNPKVTTSVIFTGDWSLPVKEAEAANSLIDQGADVLTAHVDSP
                     KVVIETAEKRGVFSTGYHASQASLAPKGYLTGAEWNWEKVYTAYIEKVKAGQMPDHLV
                     RGGFSSGYIKLSPYGAAVSDAVKAKADDAKAKLTAGTLVIYAGPMKDNAGKEIIPAGT
                     QHAQTDISLESMNYLVQGVKGKLN"
     gene            622..1731
                     /locus_tag="VLJ38_15885"
     CDS             622..1731
                     /locus_tag="VLJ38_15885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU41059.1"
                     /translation="MSPTTAVGEAPNPARARVDWAELGARLEPFLIPIFALLVSLALF
                     GAFVALAGQPPLEVYYQMYRGAFGTWFSFQNTLQRASPLLLTALCTALPARAGLVVIG
                     GEGAFVMGGLAAGATGVAMAGSPRGVILGAMFAAGALVGALWIGFCGFLRARRGVNET
                     IASLLLTYIGIALLNHFVEGPLRDPESLNKPSTRHIGEANMLGSIPGLDVHWGLVAGV
                     VACLFAYVLMERTVFGFSAALVGGNARAAKLSGVKVSEVIVITCALAGAAAGVAGSFE
                     VAAVHGRANASLVAGYGYAGILVSFLARHNALAIIPVSLFLGGIAASGGLLQRVFGLP
                     DATVNVLQGILFVVLIASDTLYGRIPWRALAGARS"
     gene            1728..2654
                     /locus_tag="VLJ38_15890"
     CDS             1728..2654
                     /locus_tag="VLJ38_15890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU41060.1"
                     /translation="MTVTTLGLWGIPLAVLGGAIRVSTPFLFVSLGECITERSGRVNL
                     GLEGTLVMGAMSGYGFSYLTGSPWLGVLGAGVVGALLGALHGFICGKPRVNDIALGIA
                     MMLLGVGLAFFLGKPLIQPTAPRLGAIPFGFFSSSALVRSALNVNVLFVLGVALAPLL
                     HFGLQNTRWGLVVRTVGESSEAARALGYDVNRVRLLATATGGFLAGVGGSFLSLYYPG
                     SWNEGLSSGQGLMAVALVIFARWSPKRCLYASLLFGGAGAIGPALQSVGITTGYYLWN
                     AAPYALTLAILIASSSATRASADMPAELGAAR"
BASE COUNT          395 a          915 c          924 g          511 t
ORIGIN      
        1 gctcggtgaa cccgaaggtg acgacgagcg tgatcttcac cggcgactgg tcgttgccgg
       61 tcaaggaagc ggaggccgcc aacagcttga tcgatcaggg cgcggacgtg ctcaccgcgc
      121 acgtggactc accgaaagtc gtgattgaga ccgccgagaa acgtggcgtc ttcagcaccg
      181 gttatcacgc gagccaggcg tcgctcgcgc cgaagggcta cctcacgggc gcggaatgga
      241 actgggagaa ggtctacacc gcgtacatcg agaaggtgaa agccgggcag atgccggacc
      301 atctcgtgcg tggcggattc tcgtccggct acatcaagct gtcgccctac ggcgcggctg
      361 tgagcgatgc cgtcaaagcc aaggcggacg acgccaaggc gaaacttacg gcgggtactc
      421 tcgtcatcta cgcgggccca atgaaggaca acgccggcaa ggagatcatc cccgccggca
      481 cccagcacgc gcaaacggac atcagcctcg agagcatgaa ttacctggtg cagggcgtga
      541 aagggaagct caactaggac cacccgcaag gctggtcgag cgaaacacgt gcaaaccgtg
      601 agcgattctt cggagcttcc tatgtcgccg accacggcgg tcggtgaagc tccgaaccct
      661 gcgcgcgctc gagtcgattg ggccgaactc ggcgcgcggc tcgagccgtt cctcatcccg
      721 atttttgctc tgctcgtctc gctcgcgctc ttcggcgcgt tcgtggcgct cgccgggcag
      781 ccgccgctcg aggtgtacta tcagatgtac cgcggcgcgt tcgggacgtg gttctcgttc
      841 cagaacacgc tgcagcgcgc gtcaccgctg cttttgaccg cactttgtac ggcgcttccc
      901 gcgcgggccg gcctcgtcgt gatcggcggt gagggcgcgt tcgtcatggg cggcctcgcc
      961 gccggtgcga cgggcgtggc gatggcgggc tcgccgcgcg gcgtgatcct cggagcgatg
     1021 ttcgcggcag gagcgctcgt tggcgcgctc tggattgggt tttgtggttt cttacgcgcg
     1081 cggcgcgggg tgaacgagac gatcgcgagc ctgctcctca cgtacatcgg catcgcgctc
     1141 ttgaaccatt tcgtcgaggg gccgctgcgc gatccagaaa gtcttaacaa gccgtccacg
     1201 cgtcacatcg gggaagccaa catgctcggc tcgatcccgg gactcgacgt gcactggggg
     1261 ctcgtggcgg gcgtcgtcgc gtgcctcttc gcgtacgtcc tgatggagcg cacggtgttc
     1321 ggtttttcgg cggcgctcgt cggcggcaac gcccgcgcgg ccaagctctc gggcgtcaaa
     1381 gtgtccgaag tgatcgtgat cacgtgcgcg ctcgcgggtg cggcggcggg ggtcgccggc
     1441 tcgttcgagg tcgcggcggt gcacgggcgc gcgaacgcgt cgctcgtggc gggctatggc
     1501 tacgcgggca tcttggtgtc gttcctcgcg cgacacaacg cgctcgccat catccccgta
     1561 tcgctctttt tggggggaat cgcggcgtcc ggcggtttgc tgcagcgcgt cttcgggctc
     1621 ccggacgcca cggtcaacgt gctgcaaggc atcctcttcg tcgtcttgat cgcgagtgac
     1681 acgctctacg ggcgcatccc ctggcgcgca ctcgcaggag cacgctcatg acagtcacga
     1741 cgctcggcct ctggggcatc ccgctcgccg tgctcggcgg ggccattcgc gtgagcacgc
     1801 cgttcttgtt cgtgagcctc ggcgaatgca tcacggagcg gagcggccgc gtgaacctcg
     1861 gactcgaggg gacgctcgtg atgggcgcga tgtccggcta cgggttttcg tacctcacgg
     1921 ggtcgccgtg gctcggcgtg ctcggcgcgg gcgtggtcgg cgcgctgctc ggcgcgctgc
     1981 acggcttcat ctgcggcaag ccgcgcgtca acgacatcgc gctcggtatc gcgatgatgc
     2041 tgctcggcgt gggactcgcg ttcttcttgg gcaagccgct gattcaaccg acggcgccgc
     2101 gcctcggcgc gatcccgttc ggcttcttct cgagtagcgc gctcgttcgc tcggccttga
     2161 acgtcaacgt gctcttcgtg ctcggcgtcg cgctcgcacc cctcttgcac tttggccttc
     2221 aaaacacgcg ctggggcctg gtcgtgcgca ccgtcgggga aagctcggag gcggcgcgcg
     2281 cgctcggtta cgacgtgaac cgcgtgcgcc tgctcgccac ggcgacgggc ggcttcttgg
     2341 caggcgtcgg cggctcgttt ctctccctct actatccggg cagctggaac gaaggcctct
     2401 cgagcggcca gggcctgatg gccgtcgcgc tcgtcatctt cgcgcgctgg agtcccaagc
     2461 gctgcctcta tgcttcgctc ctcttcggtg gtgcgggcgc catcggacct gcgttgcagt
     2521 cggtcggcat cacgaccggc tactaccttt ggaacgccgc gccgtacgcg ctgacgctcg
     2581 cgatcctgat cgcctcgagc tccgccacgc gcgcctccgc cgacatgccc gccgagctcg
     2641 gagccgcccg ctaacgctca cgtcccgagg atccccatga aattcgtgcc tgctgatccg
     2701 tacccctggc cttacgacgg cgccctcgaa cccaagaaca ccgcg
//
LOCUS       DATIML010000916         1833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_775935, whole genome shotgun sequence.
ACCESSION   DATIML010000916 DATIML010000000
VERSION     DATIML010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_775935"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1833
                     /locus_tag="VLJ38_15895"
     CDS             <1..>1833
                     /locus_tag="VLJ38_15895"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU41061.1"
                     /translation="SVGTTRRAFGHDVFPDARRALASLEDASARAKRFEPLAAYLAFA
                     GYTSELRFGRDPATHSRGSVILRELRDPNAAYADSARAASRGVEGDVAGALQTARALA
                     SARPADVDLKVLVAELTLRGSDARDAVAAWEAVEQAEPSARAAYGTARAKYAAGDFAG
                     AEAAAKLTLTRNPAHFSAPLLVARLQALGSGGDIEATASIERLLKTPNAASPEELVLA
                     QTLLGDIHLARGHVALAESAYASALKINPTSAPALVGLGEAQFQGGRFSEALARFEAA
                     SQTDPNDVRAQVGAAKTKLSLDRIEDATRALAALAKAQPKDPSVALWYGRALEASGDR
                     DRASAVYHTAIDAAAPSTELVSVYVALATLQNQNGQAEEAQKTLAAAKKKLPESGRLH
                     RALGHLALDQNRLPDAVRELKRALELDPEDLTARFELGVAERRSQNYAAATKTFDAVA
                     AVDRDHPGLALERGLMFEATGHAAEALTAYEGALAKAPGDPELMLRVGCGRVSAGKAA
                     LAEELLRKVLALRPASAETNHCLGRALLAQEKIPDAQRFFDRAVELDPRRAEYHLYAG
                     WAANEAQNVGKADKELAAALAIDNSLADAYWQRGVLRARQGAVK"
BASE COUNT          297 a          672 c          631 g          233 t
ORIGIN      
        1 gatccgtcgg caccacgcgg cgtgcgttcg ggcacgacgt cttcccggac gcgcgccgag
       61 cgctcgcgtc gctcgaagac gcgagcgccc gcgcgaagcg cttcgagccg ctcgcggcct
      121 acctcgcgtt tgcgggctac acgagcgagc tccgcttcgg gcgcgacccg gcaactcact
      181 cgcgcggcag cgtgatcctg cgcgagctgc gcgatccgaa cgcggcttac gccgattcgg
      241 ctcgcgccgc gagtcgcggc gtcgaaggcg acgtagccgg cgcgctccag accgcgcggg
      301 cgctcgcttc agcacgcccc gccgacgtgg atttgaaggt gctcgtcgcc gagctcacgc
      361 tgcgcggcag cgacgcgcgt gacgccgtag cggcgtggga agcggtcgag caggccgagc
      421 cgagcgcgcg cgcggcttac ggtactgcgc gcgccaagta cgcggcgggc gacttcgcgg
      481 gcgccgaggc cgccgcgaag ctcacgctca cgcgcaatcc cgcgcatttt tcggctccgc
      541 tcctggtcgc tcgcctccag gcgctcggca gcggcggcga catcgaagcg acagcgagca
      601 tcgagcgcct gctcaagact ccgaacgcgg cgagcccgga agagctcgtg ctcgctcaaa
      661 cgctgctcgg ggacatccac ctcgcgcgcg gtcacgtcgc cctcgccgag agtgcgtacg
      721 cgagcgcgct caagatcaat ccgacctcgg cgcccgcgct cgtcggcctc ggtgaagccc
      781 agttccaagg cggcagattc tccgaggcgc tcgcgcgctt cgaggcggcc tcgcaaacgg
      841 atccgaacga cgtgcgcgca caagtcggcg cggccaagac caagctctcg ctcgaccgca
      901 tcgaggacgc gacgcgggcg ctcgccgcgc tcgccaaagc gcaaccgaaa gatccgagcg
      961 ttgcgctctg gtacggccgc gcactcgaag cgtccggcga tcgtgatcgc gcgagcgccg
     1021 tctatcacac ggccatcgac gcggccgcgc cgtcgaccga gctcgtgagc gtctacgttg
     1081 cgctcgccac gctgcaaaat caaaacggcc aagccgaaga agcgcaaaag acgctcgccg
     1141 cggccaagaa gaagctcccc gaatcggggc gcttgcatcg cgcgctcggc cacctcgcgc
     1201 tcgatcagaa tcggctgccg gacgccgtgc gcgagctcaa acgcgcgctc gagctcgacc
     1261 ccgaggacct cacggcgcgc ttcgagctcg gtgtcgcgga gcgccgcagc cagaactacg
     1321 ccgccgcaac gaaaaccttc gacgcggtcg cggcggtgga ccgtgatcac cccgggctcg
     1381 cactcgagcg cgggctcatg ttcgaggcga ccgggcatgc cgccgaagcg ctcacggcct
     1441 acgagggcgc gctcgccaag gcgccgggcg atccggagct catgctgcgt gtcggctgcg
     1501 ggcgcgtctc ggcgggcaaa gccgcgctag ccgaggagct cttgcgcaag gtgctcgcac
     1561 tcagaccggc ctcggcggag accaaccact gtctcggtcg ggcgctcctc gcgcaggaga
     1621 aaatcccgga cgcgcagcgg ttcttcgatc gggcggtcga gctcgatccg cgccgcgccg
     1681 agtatcacct ctacgcgggc tgggccgcga acgaagcgca gaacgtcggc aaagcggaca
     1741 aggagctcgc ggcggcgctc gccatcgaca actcgctcgc cgacgcgtac tggcagcgcg
     1801 gcgtgctccg cgcgcgacag ggagcggtca aag
//
LOCUS       DATIML010000917         3204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2504846, whole genome shotgun sequence.
ACCESSION   DATIML010000917 DATIML010000000
VERSION     DATIML010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3204
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2504846"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="VLJ38_15900"
     CDS             complement(<1..859)
                     /locus_tag="VLJ38_15900"
                     /inference="COORDINATES: protein motif:HMM:NF025627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HSU41062.1"
                     /translation="MHAFPFIGVRRRLALAGLATGLLALSHSRTAVSAPEDAARALVP
                     PPITVLTSKTGVERGLVFVAPKTTPSASVQQGPEIIDDHGRPVWFHPVGDNEQAANFR
                     VQEYRGKPVLTWWQGTNSRTGPGEGLGVNYVYDQNYQQIAAVAAGNGYQADIHEFRIT
                     PRGTAFITIYHHLPYDLSPVGGPADGIVVDGVAQEVDLATGAVVWEWHSIDHVPLSES
                     QSTPPTSATTAYDYFHINAVNWDEDGNVFVSARNTWTIYKIDRRTRQIIWRQGGKSST
                     FRLSTGTGGT"
     gene            1124..1822
                     /locus_tag="VLJ38_15905"
     CDS             1124..1822
                     /locus_tag="VLJ38_15905"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU41063.1"
                     /translation="MPKKRINPPAPEPSRPRASARGRPPSIDSERLLAVARDVFLERG
                     IRATTLEVAERAGVSEGVLFHRFKSKEGLFSAAMDFDGEHAPHAILETIATLDGLDVR
                     EAIVRVATKLFEIGRVALPILMLSWSNPQPCSGPIFDKKRQKFREVLKALAAYFERQM
                     ELGKLRRMDAEMLARTLLGAVHHFAMTRILLEEGDGALMPEGMFVRGLADLMLNGAAE
                     TQAVPPRHPRFAAR"
     gene            1844..>3204
                     /locus_tag="VLJ38_15910"
     CDS             1844..>3204
                     /locus_tag="VLJ38_15910"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU41064.1"
                     /translation="MTPSRLPMFRHHLLSACLKSTFLASILLAPGRASAIQPLETFLE
                     AARQSSFDVREQRATVEQRDWEKESVFGRLLPAASARGVYTRNQFAARIPPSIIPGGA
                     TITPQDQFDLFLQVDVPLVDLSSYARLSQARHLVGASSAQLELSQNDAQRATARAYYA
                     YVGAAALVQAAERSVKIAEDNLAFVSTRRSLGAATELDQERARASLEQSKQDQADAER
                     LAVTAARNLETISGLTPSSVVEYPIDDLHPEPGLETWLAYRNTPADRVQAALNRAAES
                     AKRAAAYSVLPTLSANGQERVTNAPGFTGHSNFYTVQAMLSWRFDYGTYATAQAQASA
                     VDVQKVRAERTRRGVEDDVFDAWDRVRTGIVKSASSRAQAQAAVRAEELALSRYQSGA
                     LTQLDVTQAQRDAFQAQANRIQADADLLYSRVLLRLAAGQSPHVQPSSSPPVQAKDLG
                     APPA"
BASE COUNT          531 a         1114 c         1028 g          531 t
ORIGIN      
        1 gagtgccgcc ggtgcccgtg ctgagccgga aggtcgagct cttgccgcct tggcgccaga
       61 tgatctgccg cgtgcggcgg tcgatcttgt aaatcgtcca ggtgttgcgt gcgctgacga
      121 agacgttgcc gtcctcgtcc caattcacgg cgttgatgtg gaagtagtcg taggccgtcg
      181 tcgccgaagt cggcggcgtc gactggctct ccgagagcgg cacgtgatcg atgctgtgcc
      241 actcccacac cacggcgccc gtcgcgagat cgacctcctg agccacgccg tcgacgacga
      301 tgccgtccgc ggggcctccg accggcgaaa gatcgtaagg aaggtggtga tagatcgtga
      361 tgaacgccgt tccccgcggc gtgatccgga attcgtggat gtccgcctga tagccattgc
      421 cggcggcgac cgcggcgatc tgctgataat tctggtcgta aacgtagttt accccgagtc
      481 cctccccagg ccccgtgcga ctgttcgtgc cctgccacca ggtgaggacg ggcttgcccc
      541 gatactcctg gacgcgaaag tttgctgcct gctcgttgtc tccgacgggg tgaaaccaga
      601 cgggacgccc gtggtcgtcg atgatctccg gcccttgttg caccgacgcg ctcggcgtcg
      661 ttttgggcgc gacgaacacg agcccgcgtt cgacgccggt cttcgacgtg agcacggtga
      721 tcggaggcgg cacgagtgcc cgagcggcgt cctccggcgc cgaaaccgcc gtgcggctgt
      781 gcgacagcgc gagcaggccc gtggctagac ccgctagcgc gaggcgacga cgaacaccga
      841 tgaatggaaa agcatgcatg actctctcct ggacgcgtcg cgaccggtcg atccggcgcg
      901 acaggggaga ggagcttcgt tcgacgtttc cacgccacgc tgagtgccat cagcacggcg
      961 gcccgtcaag acaaatgtct attataacgg accgcgtatc gggccctggc ggcggcagcc
     1021 ggggcggctg acgttgcagt cctgcgcgaa ctgcacgcaa acgacgcgcg cagccctgtc
     1081 gcaccccttg acgattattg agtcctgcct cattaaagta accgtgccta aaaagcgcat
     1141 caatccgcct gcgcccgagc cgagtcgccc gcgcgcttcc gctcgcggcc ggccgcccag
     1201 catcgactcg gagcggctgc tcgccgtggc gcgagacgtc tttttggagc gcggcatccg
     1261 cgcgacgacg ctcgaagtcg ccgaacgcgc gggcgtgtcg gagggagtgc tctttcaccg
     1321 cttcaaatcg aaagaggggc tcttcagcgc ggcgatggat ttcgacggcg agcacgcgcc
     1381 gcacgccatc ctcgagacca tcgcaacgct cgacgggctc gacgtgcgcg aagcgatcgt
     1441 tcgcgtcgcg acgaagctct tcgagatcgg gcgcgtcgca ctgccgattt tgatgctttc
     1501 atggtcgaac ccgcagccgt gctcgggccc gattttcgac aaaaagcgcc agaaattccg
     1561 cgaagtcttg aaggcgctcg ccgcctactt cgaacggcag atggagctcg gaaagctccg
     1621 ccgcatggac gcggagatgc tcgcccgcac cttgctcggc gccgtccatc attttgccat
     1681 gacgcgtatc ctgctcgagg agggcgacgg cgcgctcatg ccggaaggca tgttcgtgcg
     1741 cggcctcgcc gatctcatgc tcaacggcgc cgccgagacc caggccgtgc ccccgcgcca
     1801 cccgcgcttt gccgctcgct gaagcgactg ttctgacgaa cccatgaccc cttcccgctt
     1861 gcccatgttc cgccaccatt tattgagtgc ctgcttaaaa agcacgttcc ttgcgtcgat
     1921 cctgctcgcg ccgggccgcg cctcagccat ccagccgctc gagaccttcc tcgaggctgc
     1981 gcgccaaagc agcttcgacg tgcgggagca gcgcgcgacg gtcgagcaac gtgactggga
     2041 gaaagagtcg gtgttcggac gcctgctgcc ggccgcgtcc gcgcgcggtg tctatacgcg
     2101 caatcaattc gcggcgcgta ttccgccgag catcattccg ggcggcgcga cgatcacgcc
     2161 gcaagatcag ttcgacctct tcttgcaggt cgacgtgccg ctcgtcgacc tttcgagcta
     2221 cgcgcgcttg agccaggcac ggcacctcgt gggtgcgtcg agcgctcagc tcgagctgtc
     2281 gcagaacgac gcccagcgcg ccacggcgcg cgcttactac gcgtatgtcg gcgcggccgc
     2341 gctcgtgcaa gcggcggagc gcagcgtcaa gatcgccgag gacaacctgg cgttcgtgag
     2401 cacgcggcgt tcgctcggcg ccgcgaccga gctcgaccag gaacgagcgc gcgccagtct
     2461 cgaacagagc aagcaggacc aagcggacgc ggagcggctc gcggtcacgg ccgcgcgtaa
     2521 tctcgagacg atttccgggc tgactcccag ttccgtcgtc gaatatccga ttgacgatct
     2581 gcaccccgag cccgggctcg agacctggct cgcctatcgc aacacgccgg ccgatcgcgt
     2641 gcaggcggcg ctcaatcgcg cggcggaatc cgcgaagagg gctgccgcct actccgtcct
     2701 accgacgctc agcgccaacg ggcaggagcg cgtcacgaac gctcccgggt tcaccggcca
     2761 ctcgaatttc tacaccgtcc aagccatgct ctcgtggcgc ttcgactacg gcacgtacgc
     2821 cacggcgcag gcccaggcga gcgccgtcga cgtgcagaaa gtccgcgccg agcgcacgcg
     2881 gcgcggcgtc gaggacgacg tgttcgacgc ctgggatcgc gtgcgcaccg gcatcgtcaa
     2941 gagcgcttcg tcgcgcgcgc aggcacaggc cgcggtgcgc gccgaagagc tcgccctctc
     3001 gcgctaccag tccggggcgc tcacgcagct cgacgtgacg caggcgcagc gcgacgcgtt
     3061 ccaagcgcag gcgaaccgca tccaggcgga cgccgatttg ctctactcgc gcgtgctctt
     3121 gcgcctcgcc gccggccagt ccccacacgt ccaaccctcg tcgtcgcctc ccgtccaagc
     3181 caaagacctc ggcgcgccgc cggc
//
LOCUS       DATIML010000918         5073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_485626, whole genome shotgun sequence.
ACCESSION   DATIML010000918 DATIML010000000
VERSION     DATIML010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5073
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485626"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..806
                     /locus_tag="VLJ38_15915"
     CDS             <1..806
                     /locus_tag="VLJ38_15915"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSU41065.1"
                     /translation="ESGEHRPAASAVMRTARTRGVRPDAVRNPRVEPGLGVTAIASNG
                     QPLAVGTRALLLHEHVSVGIAERRIQELESMGQTVLLVALAGRLVGLVGLQDGMRPGA
                     RAAVQHLLDAGLEPALLSGDARETCEALGRALAIDHLRPEVSPADRGDEIRRLVEGGA
                     TVAVIGQSPTDDAALAAADVAVALRSAGSTSADWGVQLATDDVRDAAFALHSARDCLR
                     HARVDLALTGLPAFALAALAALGMLPAVWVPMLATAGSVLALGRGNAAS"
     gene            930..1412
                     /locus_tag="VLJ38_15920"
     CDS             930..1412
                     /locus_tag="VLJ38_15920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020464720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HSU41066.1"
                     /translation="MRAADGDIHAPDRDRLRTDLNAFMLRRGLRSTEQRRLIIDTLFT
                     ASEHVTIDRLLEQVRAIDPRVGYATVYRTLKLLTESGIAQEHHFGDGHTRYELADSEA
                     HHDHLICVECSSITEFEEPAVEALQDRIASRHGFEIRAHKHELYGVCAECQRKRPKRK
                     "
     gene            complement(1422..2057)
                     /locus_tag="VLJ38_15925"
     CDS             complement(1422..2057)
                     /locus_tag="VLJ38_15925"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HSU41067.1"
                     /translation="MDPLDPALLAEVGARAKQQLRARMKALRAAFPAAALAERSARAV
                     QNVANLPEFAAARAVALFWPMVAQKEIDVRELDSVARAQGKRVYYPGFATTSTGALSS
                     ELRLTSSPAELAVRDHRFLEPPAGAQVAARGDVDFLVVPALAAALSGHRLGFGIGFYD
                     SLLPDFRPPARAAIVVFDFQLLAEVPAFAHDVACDIVVSDARSVLAAATGA"
     gene            2084..4153
                     /locus_tag="VLJ38_15930"
     CDS             2084..4153
                     /locus_tag="VLJ38_15930"
                     /inference="COORDINATES: protein motif:HMM:NF040521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C45 family autoproteolytic
                     acyltransferase/hydrolase"
                     /protein_id="HSU41068.1"
                     /translation="MQVLAVVPAYQAERTVGAVVRGLRAKLGREPVIVVDDGSTDGTA
                     RAAEQAGAVVVSHAENRGKGAALVSGLLRARELGADAVVTVDADGQHPPEEAARVAGD
                     SSPREALVLGVRELGRDGAPRANRFSNAFSNRFLSWFGGRPLHDTQCGLRRYPLPETL
                     ALGARSSGYAFEAEVLLRAARRGWDITHVPVRVIYPPGSERVSHFHAFRDPARIVYRV
                     LQTTLLVRRRGKRRLVLAAVAAAVLAVVLVHFGIAFAARPTQPDVHPSAALPVSVAPG
                     LRELGRSYVLERGALTEVGLYGDAVAIGTAQARLLREPMLQIEGAMLRRFDQAVPSAL
                     ARLLLVDITRLRYRDVDRGMSDDRRRELAAQALAFAPDPFASVLPTYQRFLYLNALYD
                     IALSFEHSPLVGCTTFAFHGAPKPGGGALLARAFDMEVDPVFDRGKVVFLVHEDGKIP
                     FASVAWPGLVGVVSGMNREGLAVVVHGARGGETRGDGEPVVHALRRVLSEARTVTDAV
                     RLLDAKPALVSHIVVAADARGEVAVLERVPGFRASVRELPERAAVTNHLEGPFREDPK
                     NQRVLRETTTLARRARADELALRAPAPVTAEGALALLRDRRGPGDAPLPLGDRRAIDA
                     LIATHGVIFDTQTKTLWVSEAPHLLGRFVAFDLSRQLADDYRPSRSPLPALPAEPFVG
                     TAANGER"
     gene            4208..>5073
                     /locus_tag="VLJ38_15935"
     CDS             4208..>5073
                     /locus_tag="VLJ38_15935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41069.1"
                     /translation="MNKRALTRSGSAWRAGAALAVVCLVTNPAQALEPAPPSIWYRSS
                     EGCPDGAAFVGRLHGAAEGAKLATAGDRIDFVVTLGLKAGHAFGQLERQTAEGRVAVR
                     ELEAPQCEEVADAVALTLTLALEPHAAQVGASPEATTAAAATTSAQSAQPNSTSAAPG
                     EVPRASNAMASNPVAHTPAPTSTKAAPEGARHAQRWLAGADATFYKGSLPDPLVGARL
                     FVELGADAPWHGSSARVAGFFMQRARETNPDVDLLIAGGRLDACPVALFGPVVELRPC
                     VALEPHAAQVGAS"
BASE COUNT          712 a         1805 c         1802 g          754 t
ORIGIN      
        1 cggagagcgg tgagcatcgc cccgcagcga gcgcggtcat gcggacggcg cgcacgcgcg
       61 gggtgcgtcc cgacgccgtg cgcaatccgc gcgtcgagcc ggggctcggc gtgacggcca
      121 tcgcgtcgaa cgggcagccc ctcgccgtcg gcacgcgcgc tttgctcctg cacgagcacg
      181 tgagcgtcgg catcgcggag cgccggatcc aagagctcga atcgatggga cagacggtgc
      241 tgctcgtcgc cctcgcgggg cggctcgtgg ggctcgtggg gctgcaagac ggcatgcgcc
      301 ccggcgcgcg cgccgccgtg cagcacctgc tcgacgccgg cctcgaaccg gcgctcttgt
      361 cgggcgacgc gcgcgagacg tgcgaggcgc tcggccgcgc cctcgccatc gaccacttgc
      421 gacccgaggt ttcgcccgcc gaccgcggtg acgaaatccg gcgcctcgtc gaaggtggcg
      481 cgaccgtggc ggtcatcgga caaagtccga ccgacgatgc ggcgctcgcg gcggctgatg
      541 tcgccgtcgc cctgcgttcg gcgggttcga cctcggccga ttggggcgtc cagctcgcaa
      601 ccgatgacgt ccgcgacgcg gcatttgcgc tgcactccgc gcgtgactgc ttgcgccacg
      661 cgcgcgtcga tctggcgctc acggggctgc cggcgttcgc gctcgccgcg ctcgccgcgc
      721 tcggcatgct acctgccgtc tgggtgccga tgctggcgac ggcgggctcg gtgctcgcgc
      781 tcggtcgcgg caacgcggcg agctgagtcg cgggcgctcg aaatcggagc cttcacgcgc
      841 gggtcgggcc gacccttgac tgacggccgt tcggggagga ttaacggagg gtgaagagcg
      901 gtttgacgcg agcggccacc ggacggggca tgcgtgcagc cgacggagac atccatgcgc
      961 cggaccggga ccgtctccgc accgatctga acgccttcat gctgcgccgc ggcctgcgct
     1021 cgaccgagca gcgccggctc atcatcgata cgctctttac ggccagcgag cacgtgacga
     1081 tcgaccgcct gctcgagcag gtgcgcgcga tcgatccgcg cgtcggctac gcgacggtgt
     1141 accgcacact caagctcctg accgagagcg gcatcgccca agagcaccat ttcggcgacg
     1201 ggcacacgcg ctacgagctc gccgactccg aggcgcacca cgatcacctg atctgcgtgg
     1261 aatgcagcag catcacggag ttcgaagaac ccgcggtcga ggcgctgcaa gatcgcatcg
     1321 ccagccgcca cggtttcgag attcgcgcgc acaagcacga gctttacggc gtctgcgccg
     1381 agtgccagcg caagcgtccg aagcgcaagt agacgcgcgg ttcacgcgcc ggtcgccgcg
     1441 gcgaggacgc tccgcgcgtc cgagacgacg atgtcacatg ccacgtcgtg cgcgaacgcc
     1501 ggcacctccg cgagcagctg gaaatcgaac accacgatcg cggcgcgcgc cgggggacga
     1561 aaatcgggca agagcgagtc gtaaaagccg ataccgaaac ccaggcgatg tcccgacagc
     1621 gccgcggcga gcgcgggcac gaccaagaaa tcgacgtcgc cgcgcgcggc cacttgggct
     1681 ccggcggggg gctcgaggaa ccggtggtca cgcacggcga gctccgccgg tgagctcgtc
     1741 agacggagct cactcgagag cgcacccgtg ctcgtcgtag cgaagcccgg gtagtagacg
     1801 cgcttgcctt gcgcgcgggc cacgctgtcg agctcccgca cgtcgatttc cttttgtgcg
     1861 accatcggcc aaaaaagagc gacggcgcgc gcggcggcaa actccggcag attcgccacg
     1921 ttttgtacgg cgcgagcgct gcgttccgcg agcgctgcgg cggggaacgc ggcgcgcagg
     1981 gccttcatgc gcgcccggag ctgctgcttg gcgcgcgctc cgacttcggc aaggagtgca
     2041 ggatcgagcg ggtccaagga gcggccatgg tagcgtgttc gcgatgcagg tgctcgcggt
     2101 cgttccggct tatcaagcgg agcggaccgt cggcgcggtc gtgcgcggcc tacgcgccaa
     2161 gctcggccgg gagcccgtga tcgtggtcga cgacggctcg acggacggca cggcgcgcgc
     2221 agcggagcag gcgggtgccg tcgtcgttag tcacgcagaa aaccgcggca aaggggcggc
     2281 gctcgtcagc ggactcctcc gcgcgaggga gctcggtgcc gacgcggtgg tcacggtgga
     2341 cgcggacggc cagcacccgc ccgaagaagc cgctcgcgtc gccggcgact cgtcgccgcg
     2401 cgaggcgctc gtcctcggcg tgcgcgagct cgggcgtgac ggggcgccgc gcgcgaaccg
     2461 tttctcgaac gctttttcga atcgcttcct gtcgtggttc ggcgggcggc cgctccacga
     2521 cacgcagtgc ggactgcgcc gttacccgct gcccgaaacc ctggcgctcg gcgctcgctc
     2581 gagcggctac gcgttcgagg ccgaggtgct cctgcgcgcg gcgcgccgcg gctgggacat
     2641 cacgcacgtc cccgtgcgcg tgatctaccc gccgggctcc gaacgggtgt cccactttca
     2701 cgccttccgc gatcccgcgc gcatcgttta tcgcgtgctc caaacgacgc tgctcgtgcg
     2761 ccgtcgcggc aagcggcgcc tcgtgctcgc ggcggtcgcg gccgcggtgc tcgcggtcgt
     2821 gctcgtgcat ttcggcatcg ccttcgccgc gcgccccacg cagcccgacg tgcatccttc
     2881 ggcggcgctg cccgtcagcg tcgctccggg cctgcgcgag ctcggacgct cctacgtgct
     2941 cgagcgcggc gcgctcacgg aggtcggact ctacggcgac gccgtcgcaa tcggcaccgc
     3001 gcaagcgcgt ctcttacgcg agcccatgct gcagatcgag ggcgccatgc tgcggcgctt
     3061 cgaccaggcg gtgccgagcg cgctcgcgcg cctcttgctc gtcgatatca ccaggctgcg
     3121 ttaccgcgac gtggaccgcg gcatgagcga cgaccgccgc cgtgagctcg cggcgcaagc
     3181 gctcgctttc gcaccggatc cgttcgcgtc ggtgttgccc acctatcagc gctttctgta
     3241 cttgaacgcc ctgtacgaca tcgcgctctc gttcgagcat tcgccgctcg tcggttgcac
     3301 gacctttgct tttcacggcg cgcccaagcc gggcggcgga gcgctgctcg cgcgcgcgtt
     3361 tgatatggaa gtggaccccg tgttcgatcg cggcaaggtc gtgttcttgg tgcacgagga
     3421 cggcaagatc ccgttcgcct ccgttgcgtg gccgggcctc gtcggcgtcg tcagcgggat
     3481 gaatcgcgag ggtttagccg tggtggtgca cggggcgcgc ggcggcgaga cgcggggcga
     3541 cggcgagccc gtcgtgcatg cgctccggcg tgtgctgtcc gaggcccgta cggtgaccga
     3601 cgcggtgcgt ttgctcgatg cgaagccggc cttggtgagc catatcgtcg tcgccgcgga
     3661 cgcgaggggc gaggtcgccg tgctcgagcg cgtccccggc ttcagagcga gcgtgcgcga
     3721 gctgcccgag cgcgccgccg tcacgaatca cctcgagggc ccgttccgtg aagatccgaa
     3781 aaatcagcgc gttttgcgcg aaacgacgac gctggcgcgc cgcgcgcgcg ccgacgagct
     3841 cgccctgcgc gcgcctgcgc ccgtgacggc cgaaggtgcg ctcgcgctgc tccgcgatcg
     3901 acgcggaccg ggtgacgctc cgctgccgct cggcgatcga cgcgccatcg acgccctcat
     3961 cgcgacccac ggcgtgatct tcgacaccca aaccaaaacg ctctgggtga gcgaggcgcc
     4021 gcacttgctc gggcgtttcg tggcgttcga tctttcgcgc cagcttgcag acgactaccg
     4081 gccgtcgcgc tcgccgctgc ccgccttgcc tgccgagccg ttcgtcggca cggccgcgaa
     4141 cggagagcgc tgagcgccaa cacgaccgtt gccgagcggg cctccgaggc gctaaggaag
     4201 agtacgggtg aacaagcgcg cgctgacacg ctcaggctcg gcttggcgcg cgggggccgc
     4261 cctggcggtc gtctgtctcg tcacgaatcc cgcccaagcg ctcgagccag cgccgccgtc
     4321 gatctggtat cggagctcgg aaggctgccc ggatggggca gcgttcgtcg gacgcctgca
     4381 cggcgccgcc gagggagcca agcttgcgac tgccggtgat cgcatcgatt tcgtggtcac
     4441 cctcggactg aaggctgggc acgcgttcgg ccagctggag cggcaaacgg cggagggacg
     4501 cgtcgccgtc cgagaactcg aggccccgca atgcgaagaa gtcgcggacg cggtggcgct
     4561 cacgttgacg ctcgcgctcg agccgcacgc cgcgcaagtc ggcgcgtcac cggaagcgac
     4621 gacagcggcg gcggccacga cctcggccca atctgcgcag cccaactcca cgagcgctgc
     4681 gccgggcgaa gtgccccgcg cctcgaacgc catggcgtcg aaccccgtcg cacacacgcc
     4741 cgctccgacc tccacgaagg ccgcgcctga gggcgctcgg cacgcgcaac gctggctcgc
     4801 gggcgcggat gcgacctttt acaagggctc gctccccgat ccgttggtcg gtgctcggct
     4861 gttcgtcgag ctcggcgccg acgcgccttg gcacgggtcg agcgcgcgtg tcgccggctt
     4921 cttcatgcag cgcgcccgcg agacgaatcc cgacgtcgac ctcctgatcg ctggcgggcg
     4981 tctcgacgcc tgcccagtcg cgctcttcgg acccgtcgtc gagctacggc cgtgcgtcgc
     5041 gctcgagccg cacgccgcgc aagtcggcgc gtc
//
LOCUS       DATIML010000919         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3085504, whole genome shotgun sequence.
ACCESSION   DATIML010000919 DATIML010000000
VERSION     DATIML010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3085504"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VLJ38_15940"
     CDS             <1..413
                     /locus_tag="VLJ38_15940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41070.1"
                     /translation="ASTREAAERLLAAPRTDDGALRGDLRVLASWGDDVDLDFALVDP
                     DGHRVSWLGAPTRGVITARDVTSHGEEALALSGGRPGEYALEVVRSSGDGVVRGELTV
                     TAAGTTRRVPFSLDGARARLGVVKISMHSRLVPL"
     gene            complement(466..1080)
                     /locus_tag="VLJ38_15945"
     CDS             complement(466..1080)
                     /locus_tag="VLJ38_15945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41071.1"
                     /translation="MKSLVFVAGFAFGLMAVGCKKAPDSTRAAGQSSPASASATHVMP
                     PVSKATPGDITWSEPAGWKRSPRQVPMRKATYQIPHAPKDKEDAELGIFYFGAGQGGT
                     VDANVDRWVKQFADLPASKVKRADRSANGLVQHTVEIDSGTFNANSMMQGPSKPKENF
                     ALLGAIIEAPSGEYFFKLTGPADTVAAARADFYKFLDSVQPKSG"
     gene            1129..2055
                     /locus_tag="VLJ38_15950"
     CDS             1129..2055
                     /locus_tag="VLJ38_15950"
                     /inference="COORDINATES: protein motif:HMM:TIGR03718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HSU41072.1"
                     /translation="MSGAVGPVDWAVFGGIVLLSLALDRAVFGGVKARVSFREAAIRS
                     AFFVLVGVGFGLYVAAREGQNAALTYLLAYVVEESLSVDNLFVFLVLFTYFRVSEALQ
                     QRVLVWGVLGAIVMRALFIFLGSALLHRFHFMNFVFGGFLLFTGAKLLVRKEEEVDPE
                     DNVALRLARRHLRTTKEAHGDRFFVIKDGQRYATPLFLVLVVVEFTDLLFAMDSVPAV
                     LAISNDVFVVYTSNIMAILGLRALYFVLSGMMSRFHYLGTGLAVILILIGAKMVASPF
                     VQVSSLQSLVAIGVVLTVAVCASLVRGKENAQ"
     gene            2052..>2678
                     /locus_tag="VLJ38_15955"
     CDS             2052..>2678
                     /locus_tag="VLJ38_15955"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF014499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HSU41073.1"
                     /translation="MSAPFAERSSGVLLHLTSLPGPYGGGDLGPSAHRFAEFLARAGQ
                     RYWQMLPVVPPGGGDSPYDSPSAFAGSPWLVSLEALARDGLLERSDLVAPARLAGASR
                     TRYAATRRFRERRLRKACAAFLSRPNARHELTQALEQHRDWLPDYALFRAHKRAHGEK
                     PWLGWQPELARREPAALDRARRDLAAAIDFEVFVQREFSRQWAALRTHC"
BASE COUNT          373 a          914 c          883 g          508 t
ORIGIN      
        1 ccgcgagcac gcgcgaggcc gccgagcggc tgctcgcggc gccccgcacc gatgacggcg
       61 cgctccgcgg cgatcttcgc gtcctggcga gctggggcga tgacgtcgat ctcgactttg
      121 cgctcgtcga tcccgacgga catcgcgtgt cgtggctcgg tgcgcccacg cgcggcgtga
      181 tcacggcgcg cgacgtgacg agccacggcg aggaagcgct ggcgctctcg ggcggcaggc
      241 ccggcgagta cgcgctcgag gtggtgcgca gcagcggcga cggcgtcgtg cgtggtgagc
      301 tcacggtgac ggccgccggc acgacacggc gcgtgccgtt ttcgctcgac ggcgcgcgcg
      361 cgcggctcgg tgtcgtcaaa atcagcatgc attcgcggct cgtgccgctc tgaaacgtcg
      421 cggccgactc gagctccggc gccacccggg cgcgggcgcc gccgctcaac ccgatttcgg
      481 ctgcacgctg tcgaggaact tgtagaaatc ggcgcgcgcc gcggcgacgg tgtccgccgg
      541 tcccgtgagc ttgaagaaat actcgccgct cggcgcttcg atgatcgcgc cgaggagggc
      601 aaagttctcc ttcggcttgc tggggccctg catcatcgag ttggcgttga aggtgccaga
      661 gtcgatttcg acggtgtgct gcacgaggcc gttcgccgag cgatcggctc gcttcacctt
      721 gcttgccggc aaatcggcga attgcttgac ccagcggtcg acgttcgcgt ccaccgtacc
      781 gccctggcca gcgccgaaat aaaagatgcc tagctcggcg tcttccttgt ccttcggggc
      841 gtgggggatc tggtaggtcg ccttgcgcat cggaacctga cgcggcgaac gcttccagcc
      901 cgccggctca ctccacgtga tgtcgccggg cgttgccttc gacaccggcg gcatgacgtg
      961 cgtggccgac gccgacgcgg gcgacgactg gcccgctgcg cgcgtcgaat ccggcgcctt
     1021 cttgcagcca accgccatga gcccgaacgc aaaaccagca acgaaaacga ggctcttcac
     1081 ggccggcgct tatagcatgc ccctacccgg catgatacga ggcgggtgat gagcggcgct
     1141 gtcgggcccg tggactgggc cgtgttcgga gggatcgtgc tgctctccct cgcgctcgat
     1201 cgtgcggtgt tcggtggtgt gaaggcgcgc gtgtcgttcc gcgaagccgc catccgcagc
     1261 gccttcttcg tgctcgtggg ggtcgggttc ggcctgtacg tcgcagcgcg ggagggacaa
     1321 aacgccgcgc tcacttacct gctcgcctac gtcgtcgaag agtcgctctc ggtcgacaat
     1381 ctcttcgtct tcctcgtgct cttcacgtat ttccgcgtgt cggaggcgct gcaacaacgc
     1441 gtgctcgtct ggggcgtgct cggcgccatc gtcatgcgcg cgcttttcat cttcctcggc
     1501 agcgcgctgc tccatcgctt ccacttcatg aatttcgtat tcggcggatt tctgctgttc
     1561 acgggcgcaa agctgctcgt gcgcaaggag gaggaagtcg atcccgagga caacgtcgcg
     1621 ctgcggctcg cacgccgtca tctccgcacc acgaaggagg cgcacggcga ccgtttcttc
     1681 gtcatcaagg acgggcaacg ctacgctacg cccctctttc tcgtgttggt cgtcgtcgag
     1741 ttcacggatc tgctcttcgc gatggactcc gtgcccgcgg tgcttgcgat ctcgaacgac
     1801 gtcttcgtcg tctacacgtc caacatcatg gccattctcg ggctgcgtgc gctttatttc
     1861 gtgctctcgg gcatgatgag ccgcttccac tatctaggga ccggacttgc cgtgatcctc
     1921 attttgattg gcgcgaaaat ggtagcttct cccttcgtcc aagtttcgtc gctacagtcg
     1981 ctcgttgcga tcggcgtcgt gctcaccgtg gccgtctgtg cctcgctcgt gcgcggcaag
     2041 gagaatgcgc aatgagcgca cccttcgccg agcgctcgag cggcgtgctg ctacacctca
     2101 cttcgctgcc gggaccgtac ggcggcggcg acctcggacc gagcgcgcac cgttttgccg
     2161 agtttctcgc gcgcgccggc cagcgctact ggcagatgct gccggtcgtg cccccaggcg
     2221 gcggtgactc gccgtacgac agcccttcgg cgttcgcggg cagcccctgg ctcgtgagcc
     2281 tcgaagcgct cgcgcgagac ggactgctcg agcgctcgga tctcgttgcg ccggcgcgct
     2341 tggcgggcgc gtcacgcact cgttacgccg cgacgcgccg cttccgcgag cgccgcttgc
     2401 gcaaagcttg cgccgcgttc ttgagccgtc cgaacgcgcg gcacgagctc acgcaagcgc
     2461 tcgagcaaca tcgcgactgg ctgcccgatt acgcactctt ccgcgcgcac aagcgcgccc
     2521 acggggaaaa gccgtggctc ggctggcaac cggagctcgc gcggcgcgaa cctgccgcgc
     2581 tcgaccgggc acgccgtgac ctcgcggccg cgatcgattt cgaagtcttc gtgcagcgcg
     2641 agttctcgag acaatgggcc gcgctgcgca cgcattgc
//
LOCUS       DATIML010000920         3696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5685519, whole genome shotgun sequence.
ACCESSION   DATIML010000920 DATIML010000000
VERSION     DATIML010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3696
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5685519"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..959)
                     /locus_tag="VLJ38_15960"
     CDS             complement(<1..959)
                     /locus_tag="VLJ38_15960"
                     /inference="COORDINATES: protein motif:HMM:TIGR02098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HSU41074.1"
                     /translation="MKISCPSCSAKYSISDEKVVSRLAKIRCRKCGATIVIDGKVNPP
                     QVTTSATADATETPDPMETSGTEYSVDLGEGDQRTMAIADIVTAYNAGQITGETYVWA
                     DGFADWKPLADVEEIMDAINAGKSAPRGSAPKAASPWDGGASASAARAAARPARGGSS
                     DLFGRIERAGSEDEVATSAPDASGGSSGATGSRNESSVLFSLSALTSASKPSATGTRS
                     SVAAASSASREDSGLIDLKALTAAAVRADPGSGGGMGAPAIAPLATAPLGVAAPLGLG
                     SPIAVGGLSADSPAKSKTGLFLAIAIVAAAVIVALAVILKPTPP"
     gene            complement(1193..1756)
                     /locus_tag="VLJ38_15965"
     CDS             complement(1193..1756)
                     /locus_tag="VLJ38_15965"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HSU41075.1"
                     /translation="MTDSAPVPPRREKIDLLHLAAWDDVLEDATYYEILGILQLADAR
                     AIRDAFHEFALAFHPDAQLDLEPSSRQVVARIFQRGVEAYRVLSSDADRARYDLALAK
                     GLVRLEGESERRATGARSLDELCRTAAAKLYAKRAEDFITQGLLGRATDELLRALRAE
                     DGPNADLAERLEALNALVKLGSEPSGR"
     gene            complement(1763..>3696)
                     /locus_tag="VLJ38_15970"
     CDS             complement(1763..>3696)
                     /locus_tag="VLJ38_15970"
                     /inference="COORDINATES: protein motif:HMM:NF012242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSU41076.1"
                     /translation="ISAFVLRKARAVAEQALGADVERAVITVPANFNDLQRAATKVAA
                     RVAGLEVLRILNEPTAAALAYGYGKGTSERLVVYDFGGGTFDVTLLDLANNVFEVLAT
                     AGNTFLGGDDIDLAIAERMAEQALRQHRYDARADPILFDRFRLAAEQLKHELSEAETA
                     TTIVRELTHGAGGKALDLTFTLSRTELETLAEPIIEQTFDVCRDALGVAKISVDELDQ
                     VLLVGGSTRIPLVQRRVEEFFRRPGEHHLSPDEVVAMGAAIQASALAGAERRKSAIPP
                     PPAAARRASTEPGVGRGTLPPGGPRSPADVGRLRLSSMLDASEEANPETKPFEPRQKA
                     PTRPGLQPPARAPSATLPQPTPAHTLLGLGSRGRVKTGTGLGPDPLLAEAQAEQSVAP
                     EAASALDEVTRPLRESYDDEAPISSVPISSVPISAVPLSSAPAAAPIESLPPDTIETP
                     LEAEVPLDEASLPLPEAPDEVTKRVIVSPVMPVTASEAPPSSGRRSPMQPALAVPAPV
                     LIDVTPLTLSVETVGGYCDALIARNTPVPCDRTRTFATAVDDQTTVRVRVAQGESTRF
                     GENTLLGELELSALRPAPRGNVEIAVTFALDTNGMLNVSARDLGTGRATEAQLNLVGL
                     PEARELEGLAARHAAQRTG"
BASE COUNT          533 a         1210 c         1375 g          578 t
ORIGIN      
        1 gggggggtcg gtttcaaaat caccgcgagc gcgacgatca cggcagcagc gacgatcgcg
       61 atcgccagaa acaagcccgt cttgctcttg gcgggtgagt cggcggagag gcccccgacg
      121 gcaatgggcg agcccagtcc gagcggtgct gccacgccga gcggcgcggt ggcgagcggt
      181 gcgatcgcgg gagcacccat gccgccaccg ctgcccggat cggctcggac ggctgctgcc
      241 gtgagtgcct tcagatcgat gaggccggag tcttcgcgcg aggcggagct ggcggccgcg
      301 acggacgagc gtgtgccggt tgccgacggc ttcgacgcgg acgtgagggc gctcagggag
      361 aagagcacgg acgattcgtt gcgcgacccg gtggcgccgg agctgccgcc gctcgcgtcg
      421 ggggcgctcg tcgcgacctc gtcctcgctg cccgcgcgct cgatgcggcc gaacaagtcg
      481 ctcgacccac cgcgcgcggg gcgagcggcg gcgcgagcag cgctcgccga cgcgccgccg
      541 tcccagggcg aagcggcctt gggcgcggag ccgcgcggcg cgctcttgcc cgcgttgatg
      601 gcgtccatga tctcttcgac gtcggcgagc ggtttccaat cggcgaagcc gtccgcccac
      661 acgtaggttt caccggtgat ctgcccggcg ttgtaggcgg tgacgatgtc ggcgatcgcc
      721 atcgtgcgct gatcgccttc tcccaggtcg accgagtact cggttccgga ggtttccatg
      781 gggtctgggg tttcagtggc gtcggcggtg gcgctggtgg tcacttgtgg ggggttcact
      841 ttaccgtcaa tcacgatggt ggcgccgcac ttgcggcagc gaatcttggc gagacgagaa
      901 acgaccttct cgtcggagat cgaatacttg gcggagcagg agggacagga gatcttcact
      961 tagcggcctc gcaacggccc gacgcaaagg ggccagcgca aaatacggtg acgggcgcgg
     1021 tttggtctag agccgcctac cagaggaccc aaaaatggcc cgggggccga tccttttagc
     1081 tatattcgag gcgccgcgcc agcatcgggc cggaagccgg gcgagaaacc tggttagacc
     1141 cggaaaggcg cgtccggctt ggcttccgac ggcgggtccg gaccaggcgt gctcagcgtc
     1201 cactgggctc gcttccgagc ttcacgagcg cgttcagcgc ctcgaggcgc tcggccaagt
     1261 ccgcattcgg cccgtcctcg gcgcggagtg cgcgcaagag ctcgtcggta gcgcgcccga
     1321 gcaagccttg ggtgatgaag tcctcggcgc gcttggcgta gagcttggcc gccgcggtgc
     1381 ggcaaagctc gtcgagcgag cgcgcgccgg tcgcgcgccg ttcactttcg ccctcgaggc
     1441 gcacgagacc cttggcgagc gcgaggtcgt agcgtgcgcg gtcggcgtcc gacgacaaga
     1501 cccgatacgc ttccactccg cgctgaaaga tgcgcgcgac cacctgacgc gacgagggct
     1561 cgagatcgag ctgagcgtcg ggatgaaagg ccagcgcgaa ctcgtgaaac gcgtcgcgga
     1621 tcgcgcgcgc gtcggcgagc tgcaagatgc cgaggatctc gtaatacgtc gcgtcctcga
     1681 gcacgtcgtc ccacgcggcg aggtgcaaaa gatcgatttt ttcgcggcgg ggagggacgg
     1741 gggcagagtc ggtcacgctg gcttagcccg ttcgctgcgc cgcgtgccgt gccgcgagtc
     1801 cctcgagctc gcgcgcttcc ggcaagccaa cgaggttcag ctgcgcttcg gtggcgcgcc
     1861 ccgtgccgag gtcgcgcgcg ctcacgttga gcatcccgtt ggtatcgagc gcgaacgtga
     1921 ccgcgatttc gacgttgccg cgcggcgcag gtctgagcgc ggagagctcg agctcgccga
     1981 gcagcgtgtt ctcgccgaag cgggtcgatt ccccttgggc gacgcgaacg cgcacggtgg
     2041 tttggtcgtc gacggccgtc gcgaacgtgc gcgtgcgatc gcacggcaca ggcgtgttgc
     2101 gcgcgatgag cgcgtcgcag tagccgccga ccgtctcgac cgacagcgtc agtggcgtca
     2161 cgtctatcag cacgggcgcg ggaaccgcga gcgcgggttg catgggggac cggcgccccg
     2221 agctcggcgg tgcctcggag gccgtcaccg gcatcacggg cgacacgatg acgcgcttgg
     2281 tgacctcgtc cggggcttcg ggcagcggca acgacgcttc gtcgagcggc acctcggctt
     2341 cgagcggcgt ctcgatcgta tccggcggca ggctctcgat cggtgcggca gcgggcgccg
     2401 acgacagggg cacggcggag atcggcaccg acgagatcgg caccgacgag atcggcgctt
     2461 cgtcgtcgta gctctcgcgc aagggtcgcg tcacttcgtc gagcgcgctc gcggcttcgg
     2521 gtgcgacgga ctgctccgcc tgcgcttcgg ccaggagggg gtcgggccca agaccggtgc
     2581 cggtcttcac gcggccgcgc gaaccgagtc cgagtagcgt gtgggcgggc gtaggctgcg
     2641 gcaaggtggc gctcggcgcg cgcgccggcg gctgcaggcc tggtcgcgtc ggcgcctttt
     2701 ggcgcggctc gaacggcttc gtttccgggt ttgcctcctc gctcgcgtcg agcatgctgc
     2761 tcaggcgtaa ccgcccgacg tcggccggcg agcgaggtcc gccgggcggc agcgtgccac
     2821 ggcccacgcc tggctcggtg ctcgccctgc gcgcggcggc aggcggcggc gggatcgcgc
     2881 ttttgcgccg ctcggcgccg gcgagcgcgc tcgcttgaat cgccgcgccc atggcgacca
     2941 cctcgtcggg gctcaaatga tgctcgcccg gacggcggaa aaactcttcg acgcggcgct
     3001 gcacgagcgg gatgcgcgtc gagccgccga ccaagagcac ttgatcgagc tcgtccaccg
     3061 aaattttggc tacgccgagc gcgtcgcggc aaacgtcgaa ggtctgctcg atgatgggct
     3121 cggcgagcgt ctcgagctcc gtgcgcgaga gcgtgaaggt gaggtcgagc gccttgccgc
     3181 cggcgccgtg cgtgagctcg cgcacgatgg tcgtggcggt ctcggcctcc gagagctcgt
     3241 gcttgagctg ctcggcggcc agccggaagc gatcgaaaag gatcgggtcg gcgcgtgcgt
     3301 cgtaacggtg ctggcgtagg gcctgctcgg ccatgcgctc ggcgatggcg agatcgatgt
     3361 cgtcgccgcc gaggaacgtg ttgccagccg tggcgagcac ctcgaagacg ttgttcgcga
     3421 gatcgagcag ggtcacgtcg aacgtgccgc cgccgaaatc gtagacgacg agccgctccg
     3481 aagtgccctt gccgtagccg taggccaggg cggcggccgt cggctcgttc aggatgcgca
     3541 agacctcgag ccccgcgacc cgcgcggcga ccttggtggc ggcgcgctgc aaatcgttga
     3601 aattcgccgg caccgtgatg acggcgcgct ccacgtcggc gccgagcgcc tgctccgcca
     3661 cggcgcgcgc cttgcgcagc acgaacgcgc tgatct
//
LOCUS       DATIML010000921         4672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3946821, whole genome shotgun sequence.
ACCESSION   DATIML010000921 DATIML010000000
VERSION     DATIML010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4672
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3946821"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..4237
                     /locus_tag="VLJ38_15975"
     CDS             <1..4237
                     /locus_tag="VLJ38_15975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41077.1"
                     /translation="LELEPGNDRAVQLAMYYAEQLGRAGDAAARAAAYVAANPNGPLA
                     ADARSLAQQFGQGIPAAPAPRPARSPSAMPAQRSSTAPGQRASAVPAQTHAAPQSPGY
                     AAHAAAAEAPAPAASSDEIGSLVEQAQALARKARKNDAAQKYREVLALEVSNLDAIAF
                     LEPYLKQLRKFAELRDILRRAATDEGIDMDQRVAWLREAAGLSETQLRDPNAAVAALE
                     ELLALDPESEDSRSSLKRLLERANRWDDLARVLEQEAELIADVEARITAEKAVARLHE
                     QKRKDPVGAGEAWTRIAALVPEDESALETAIELFEKGARPDRAAQAIVDALPSLTDDD
                     TRARLLEKLGDLRLAAGETLPAGEAFAESAALTKSAGLWLKAETAFAQAEVWEQAAAA
                     AGERAQLADRPSEKAKLFANEATFLTRAGDTAGAVERLEQATELDPTNDELAAELEER
                     YEEAERIEDLVAFLLRRAGQLPAGSVRSGLRRRAADVQRDRLDDGDGARETLLALLED
                     GDDLDALAWLADDAEQRADPSAAVDFLGRLSKASTDTPQKIAVLLREAALFAGPLSNA
                     EEAISRYRRILDDLDADHDEALAKVAELYEGTDDPGSAALALERRLKIATDDNVKLEV
                     ANKLADLYEGPLDDPKAAVRSLDVVRGLDAEDFGAIQRLAELCERIEDWPRVAEHLAQ
                     LMEVEGDEDEVSRMTRRRAEILHQKVGKGDEALNALLEVADRGDAACREEYVKLGDEL
                     GWKGIVAVKLVEWNLSAPSGAQRSAALHGAFDRFLEVDRKADAAAVGKEVARAKGTDA
                     EFARRLEKLAIELTDLDVLAVAHDLLVQDLTGPARAEEFVRQAEVLVDCGVDSEASIH
                     HGEQALTSVPPSEVEPLLTRLAHLCTDRGRIIEIYERQVTRCKNPADRLAALARAARV
                     AAEQGDLERARGFFDIVVGGGATEDAIESLEAAARAGDAEKGGKELRRTLAEALAGGG
                     QGARDGGRTRSSMLARAARIAFQDLDDREQAFTWLGDALIAHVGDEGLEQLETFAHEV
                     GDPKRADTVLSRALEEVFDGPLVRKLLARRASIRRDELSDPQGAAADLRRLHDLSPSD
                     ADVVEQLLRLYTELADWRGMVQLYEDQILRGKDPAVRAELARKVARLWEEKLDDPREA
                     ADAWRRVLRMKQGDPEATEGLERAKSGMLKRPKGESPSALEHAAPEAPSNGKIANPVV
                     DEPKNSAEPPPAKDAKAEAKEAKKKKKRESRPPMKEEAPPAAAPASSADDEMAGVDAL
                     VGGEGEPPSPSNGPVSARSAAEFEELTAGGAPAALAPPVVQPNTGSSPVAAPPPSALT
                     PPPPSSSSGVTRAPPPPPPGSGATRPPPPPPPSRAPPLPGGARPPLPPPGARLAPPPP
                     PSGATRPPPLPPSITDDDGEDVDDAELFEDSKV"
     gene            complement(4268..>4672)
                     /locus_tag="VLJ38_15980"
     CDS             complement(4268..>4672)
                     /locus_tag="VLJ38_15980"
                     /inference="COORDINATES: protein motif:HMM:NF036772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41078.1"
                     /translation="LECWTPGTARGPLVGGNLSLLAACAAAGRLSWPAGAVVAFEDVT
                     ESAYRVDRLLTSLFAAGYFDRVSGVVVGSFTDCPSSAGVEPRDVLREKLGELRVPVAA
                     GLQFGHGAWNEPLVFGLDASLDATRGELVLAA"
BASE COUNT          784 a         1650 c         1635 g          603 t
ORIGIN      
        1 gctcgagctg gagccgggca atgaccgcgc cgtacagctc gcgatgtatt acgccgagca
       61 gctcggacgg gcaggggacg cggcggcgcg tgccgctgcg tacgtcgccg ccaacccgaa
      121 cgggccgctc gcggcggacg cgcgctcgct cgcgcaacaa ttcggccagg gcatccccgc
      181 cgcacccgca ccccgaccgg cgcgtagccc ttcggccatg ccggcgcagc gctcgtcaac
      241 tgcccccgga caacgcgcct cggccgtgcc ggcgcagact cacgccgcgc cccaaagtcc
      301 ggggtacgcc gcgcatgctg ctgccgctga ggcgcctgca cccgccgcga gcagcgacga
      361 aatcggctcg ctcgtcgaac aagcgcaggc gctcgcgcgc aaggcgcgca aaaatgacgc
      421 agctcagaag taccgcgagg tgctcgcgct cgaggtctcg aacctcgacg ccatcgcctt
      481 tctcgagccg tacctgaagc agctcagaaa attcgccgag ctgcgcgaca tcctgcgccg
      541 cgccgcgacg gacgaaggca tcgacatgga tcagcgtgtc gcatggctgc gggaggccgc
      601 cgggctttcg gagactcagc tccgcgatcc gaacgccgcc gtcgccgcgc tcgaagagct
      661 gctcgcgctc gatcccgaaa gcgaggactc ccgctcgagc ctgaagcgcc tgctcgaacg
      721 cgcgaatcgt tgggacgacc tcgcgcgcgt gctcgaacag gaggcggagc tcatcgccga
      781 cgtcgaagcg cgcatcacgg ccgaaaaagc ggtcgcgcgg ctgcacgaac agaagcgcaa
      841 agacccggtg ggcgccggcg aagcttggac gcgcatcgcc gcgctcgtgc ccgaagacga
      901 gtcggcgctc gagacggcca tcgagctctt cgagaagggc gcacgcccgg accgcgcggc
      961 gcaagccatc gtcgatgcgc tgccgtcgct cacggacgac gacacgcgcg cgcgcttact
     1021 cgaaaaactc ggcgatctgc ggctcgcggc gggcgaaacg ctgccggccg gcgaagcttt
     1081 cgccgagtcg gcagcgctca ccaagagcgc cggactatgg ctgaaagccg agaccgcgtt
     1141 cgcgcaagcc gaggtgtggg aacaagccgc cgcggcggca ggcgagcgcg cccagctcgc
     1201 ggatcggcct tcggagaagg ccaagctctt cgcgaacgag gcgacgttcc tcacgcgtgc
     1261 gggtgatacc gccggcgctg tcgagcgcct ggagcaggcg accgagctcg atccgacgaa
     1321 cgacgagctc gcggcggagc tcgaggaacg ctacgaggag gcggagcgca tcgaggacct
     1381 cgtcgcgttt ctgctgcgcc gcgcaggtca gctgccggcc ggctccgtgc gttcgggctt
     1441 gcgccgtcgc gcagccgacg tgcagcgcga caggctcgac gacggcgacg gcgcgcgcga
     1501 aacgctcttg gcgctgctcg aggacggcga cgatctcgat gcgctcgcct ggctcgccga
     1561 cgacgccgag cagcgcgccg atccgtccgc tgccgtcgac tttctcggcc ggctcagcaa
     1621 ggcgagcacc gacacgccgc agaagatcgc ggtgctcttg cgcgaggcgg cgctcttcgc
     1681 gggcccgctc tcgaacgccg aagaagccat ctcgcgctac cggcgcatcc tcgacgatct
     1741 cgacgccgac catgacgagg cgctcgccaa ggttgccgag ctttacgagg gtaccgacga
     1801 tcccggctcc gccgcgctgg cactcgaacg ccggctcaag atcgcgaccg acgacaatgt
     1861 gaagctcgaa gtcgccaaca agctcgccga tctttacgag ggtccgctcg acgatcccaa
     1921 ggcggccgtg cgttcgctcg acgtggtgcg cgggctcgac gccgaggact tcggtgccat
     1981 tcaacgtctg gccgagctct gcgagcgcat cgaggattgg ccccgtgtag ccgagcatct
     2041 ggctcagctg atggaagtgg aaggtgacga ggacgaggtg agtcgcatga ctcgccgccg
     2101 cgccgaaatc ctgcaccaga aggtgggcaa gggtgacgag gcgctcaacg cgctgctcga
     2161 agtcgccgat cgcggcgatg cggcttgtcg cgaggagtac gtgaagctcg gtgacgagct
     2221 cggctggaag ggcatcgtcg ccgtcaaact cgtcgaatgg aacctgtcgg cgccctcggg
     2281 cgcgcaacgg tcggcggcgc tccacggcgc gttcgatcgc ttcctcgaag tggatcgcaa
     2341 ggccgatgcc gccgccgttg gcaaggaagt ggcgcgggcg aagggtacgg acgccgagtt
     2401 cgcgcgccgg ctcgagaagc tcgccatcga gctcaccgat ctcgacgtgc tcgccgtggc
     2461 gcacgatttg ctcgtccagg atctgacagg tcccgcgcgg gccgaggagt tcgtgcggca
     2521 agccgaagtg ttggtcgatt gcggcgtcga cagcgaggcc tcgattcatc acggcgagca
     2581 ggcgctcacg agcgtgccgc cgagcgaggt cgagccgctc ctgacgcgac tcgcgcacct
     2641 ctgcaccgat cgcgggcgca tcatcgaaat ctacgagcgg caggtcacgc gctgcaaaaa
     2701 tcccgccgac cgactggcgg cgctggcgcg cgcggcgcgc gtcgcggccg agcagggcga
     2761 tttggagagg gcgcggggct tcttcgatat cgtggtcggc ggcggcgcga cggaagacgc
     2821 gatcgagtcg ctcgaagcgg cggctcgggc cggcgacgcc gaaaaaggtg gcaaagagct
     2881 gcggcgcacg ctcgccgaag cgctcgcggg cggtggtcag ggcgcacgcg acggcggtcg
     2941 cacgcggagc agcatgctcg cgcgcgcggc tcgtatcgcc ttccaggacc tcgacgatcg
     3001 cgagcaagcg ttcacgtggc tcggcgatgc gctcatcgca catgtcggcg acgaagggct
     3061 cgaacagctc gagacgtttg cgcacgaggt cggtgacccg aagcgcgccg acacggtctt
     3121 gagtcgcgcg ctcgaagagg tgttcgacgg gccgctcgtg cgcaagctgc tcgcgcgccg
     3181 ggcctcgatt cgtcgcgacg agctctccga tccccagggt gcggccgccg atttgcggcg
     3241 cctgcacgat ctctcgccat ccgacgccga cgtcgtcgaa cagctcttgc gcctgtacac
     3301 cgagcttgcg gactggcgcg gcatggtcca gctctacgaa gaccagatct tgcgcggcaa
     3361 ggatcctgcc gtgcgcgcgg agctcgcgcg taaggtcgcg cggctctggg aagagaagct
     3421 cgacgatccg cgcgaggccg ctgatgcgtg gcgtcgcgtg ctgcgcatga agcaaggcga
     3481 tccggaagcg acggaaggcc tcgagcgcgc caagtccggc atgctcaaac gccctaaggg
     3541 agagtcgccg agcgcgctcg agcacgcggc gcccgaagcg ccttcgaacg gaaaaatcgc
     3601 taacccggtg gtcgacgagc cgaagaactc agccgaaccc cctcccgcga aggacgccaa
     3661 ggcggaggcg aaggaagcca aaaagaagaa gaagcgcgaa tcgcgaccgc ccatgaagga
     3721 ggaggctccg ccggcggctg ctcccgccag ctcggccgac gacgagatgg ccggcgtcga
     3781 cgcgctggtc ggcggcgaag gggaaccccc gtccccgagc aatgggcccg tcagcgcgcg
     3841 ttcggcggcc gaattcgagg agctcacggc gggcggcgct cccgcggcgt tggcgcctcc
     3901 ggttgtgcag ccgaacaccg gcagctcgcc cgtggcggcg ccgccgccct cggcgctgac
     3961 gccaccgccg ccgtcgtcat cctcgggtgt gacgcgcgcg ccgccaccgc cgccgcccgg
     4021 ctcaggggcg actcgcccgc ctccgcctcc gcctccctca cgggccccgc cgctgccagg
     4081 tggtgctcga ccgccgttgc ctccgcccgg cgcccggctt gcgccacctc cgccgccctc
     4141 gggagccacg cgtccgccgc cactcccgcc gtcgatcacc gacgacgacg gcgaggacgt
     4201 cgacgacgcc gagctcttcg aggacagcaa ggtctagcgc cgcccgtcac cgagcattga
     4261 cgtcgggtta cgcggcaagc acgagctcgc cgcgcgtcgc gtcgaggctt gcatcgagcc
     4321 cgaagacgag cggctcgttc caagcgccgt gcccgaattg caggcccgcc gcgacgggga
     4381 cgcgcagctc cccgagcttt tcgcggagca cgtcgcgcgg ttcgacgccc gccgaggagg
     4441 gacaatccgt gaagctgccg acgacgacgc cgctcacgcg atcgaaatac ccggcggcga
     4501 aaagcgaagt gagcagtcga tccacgcggt acgcgctttc ggtcacgtcc tcgaacgcca
     4561 ccacggcacc ggccggccac gagagtcgcc ccgccgcggc gcacgcggcg aggagcgaca
     4621 agttgccgcc gacgagcggc ccgcgcgccg tgccgggcgt ccagcactcg ag
//
LOCUS       DATIML010000922         4127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4822092, whole genome shotgun sequence.
ACCESSION   DATIML010000922 DATIML010000000
VERSION     DATIML010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4822092"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1991
                     /gene="uvrA"
                     /locus_tag="VLJ38_15985"
     CDS             <1..1991
                     /gene="uvrA"
                     /locus_tag="VLJ38_15985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HSU41079.1"
                     /translation="LHVNPDVPWKDLPEEQREAILYGAQPAKGKRRGQPSYDGIVPRL
                     ERMLDSGEAPESEDEAGDDGAIGIDDVGRFVVTRTCPACNGVRLRPEALAVRVVDKTI
                     ADLCSMPLRTLRQFLTELGQNPDLTSRDAAIALPLLRAVAERLHFLLEIGLDYLTLDR
                     AAHSLSGGEGQRIRLATQIGASLVGVLYVLDEPSIGLHARDNERLLFALRRLVDKGNS
                     VLVVEHDRDAILAADHVLDMGPGAGAHGGNIVAAGTPEELMASPASVTGPYLSGEKRL
                     PVPSSRTKPSAAVLRVVGARAHNLRDVTLEVPLGLVTAVTGVSGSGKSSLIVDTLLSA
                     ARAELYGATGWVGPCERIEGLDQIDKVISIDQTPIGRTPRSNPATYTGIFTHLRELYA
                     GLSDARARGYKPGRFSFNVRGGRCEACQGDGVLRVAMHFLPDVYVTCDACGGKRYNRE
                     TLEVAYRGLSIADSLELTVDAASELFESIPRIRQKLTALRQVGLGYIQLGQAATTLSG
                     GEAQRVKLATELARKATGRTLYVLDEPTTGLHFSDIELLTHALLGLRDAGNTVLFIEH
                     NMDLVACADWVVDLGPEGGENGGRIVAQGPPELVAEAADSHTGRYLKLALSGTRVTAP
                     KTAAASTPAAPAATPSARASATSGMRAATRETRRTKAR"
     gene            complement(2016..2378)
                     /locus_tag="VLJ38_15990"
     CDS             complement(2016..2378)
                     /locus_tag="VLJ38_15990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HSU41080.1"
                     /translation="MTKVQLKKFRDMLEAKREEIIKRAQQTLDQDMALDTDDLPDEMD
                     LASSEYLQSFTFRLRGREKAFLDKIQKAIDKIDAGTFGVCDDCGDKISVKRLEARPET
                     TLCIRCKEDQERVEKDFG"
     gene            complement(2558..>4127)
                     /locus_tag="VLJ38_15995"
     CDS             complement(2558..>4127)
                     /locus_tag="VLJ38_15995"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HSU41081.1"
                     /translation="CARAETPPEPVPAKAAASAPALSPRAETVARADALAIAATKLDP
                     AQAAPLFVEAAELRERLFRVEHREADALEALELWGQAAEARRSQRCAPALRRALLDAE
                     LRHDPALAYRQVAAERARGADARCRALADEALATLAAFRVSEPAAEQAADAGLPSASA
                     SDAAPSGGPVVVPDKAGVKAEPATIGEIERYGAKDAARVVVHVTHPALFEVRSLAAEG
                     SNGPRLVVDLLNVRGKSRRALAVGGLVERVRVGAQPSGTRVVLDLSQPAYRRVFYLPE
                     PFRLVIDVSNQPPVGFSPQVGGARAVRRVVLDPGHGGNDPGATGPGGLREKDVTLDVA
                     HRAAPLLARELGVSTLLTRDTDTYVALDERTARANAFGADLLISIHCNASEDGGGKGV
                     MSFVLDGSRDTLSARIAARENSASAAAASELANALSSVLDRSVVQRSERLAELLQRAT
                     LASLAPRYPEVPDLGVRRAGFYVLAGATMPAVLFETSFISSAPGELRLATPDYRQKLA
                     DGIVNAVRAYRDGR"
BASE COUNT          647 a         1463 c         1404 g          613 t
ORIGIN      
        1 cgctccacgt caaccccgac gtgccctgga aggatctgcc cgaggagcaa cgcgaggcga
       61 tcctgtacgg cgcgcagccg gccaaaggca aacgccgggg gcagccgagt tacgacggga
      121 tcgtgccgcg gctcgagcgc atgctcgact cgggcgaagc accggaaagc gaagacgagg
      181 cgggcgacga cggcgcgatc ggcatcgacg acgtcggccg cttcgtcgtc acgcgcacct
      241 gccccgcgtg caacggcgtg cgcctgcgcc ccgaagcgct cgccgtccgc gtcgtcgaca
      301 agacgatcgc cgatctttgc tcgatgccgc tccgcacgct gcgtcagttt ttgaccgagc
      361 tcgggcagaa tccggatttg acgagccgcg acgccgccat cgcgctgccg ctcttgcgcg
      421 cggtcgccga gcggctccac ttcttgctcg agatcggcct cgactacctg acgctcgacc
      481 gcgcggcgca ttcactgtcg ggcggcgaag gccagcgcat tcgcctcgcg acccagatcg
      541 gcgcttcgct cgtgggcgtg ctttacgtgc tcgacgagcc gagcatcggc ttgcacgctc
      601 gcgacaacga gcgtctgctt ttcgccttgc gcaggctggt cgacaagggc aacagcgtcc
      661 tcgtcgtcga gcacgatcgc gacgcgattc tcgccgccga tcacgtgctc gacatgggtc
      721 ccggcgccgg cgcccacggc ggcaacatcg tcgccgccgg cacgcccgaa gagctcatgg
      781 catcgcccgc ttcggtgacg ggcccctatc tctcgggcga aaagcgcctg ccggtgccgt
      841 cctcgcgcac caagccgagc gccgccgtgc tgcgcgtcgt gggcgcgcgc gcgcacaacc
      901 tgcgcgacgt gacgctcgag gtgccgctcg gcctcgtcac ggccgtcacg ggcgtgagcg
      961 gctcgggcaa gagcagcctc atcgtcgaca cgctgctcag cgcggcccgc gccgagctct
     1021 acggcgcgac cggctgggtc ggtccctgcg aacgcatcga agggctcgat cagatcgaca
     1081 aagtcatcag catcgatcag accccgatcg gccgcacgcc gcgctcgaac ccggcgacgt
     1141 acaccggcat tttcacgcac ctgcgcgagc tttacgccgg actctccgac gcgcgcgcgc
     1201 gcggttacaa gccgggacgg ttctcgttca acgtgcgcgg cggccgctgc gaagcgtgcc
     1261 aaggcgacgg cgtgctccgc gtcgcgatgc actttttgcc cgacgtttac gtcacctgcg
     1321 acgcctgcgg cggcaagcgc tacaaccgcg aaacgctcga ggtcgcctac cgtggcctat
     1381 ccatcgccga ctcgctcgag ctcaccgtcg acgccgcgag cgagctcttc gagtccatcc
     1441 cgcgcatccg ccagaagctc acggcgctgc ggcaggtcgg cctcggctac attcaactcg
     1501 gacaggccgc gacgacgctg tcgggcggcg aagcgcagcg cgtgaagctc gcgaccgagc
     1561 ttgcgcgcaa ggcgaccgga cgcaccctct acgtgctcga tgaaccgacg actggcttgc
     1621 acttctcgga catcgagctc ttgacgcacg cgctcctcgg gctgcgtgac gccggcaaca
     1681 ccgtgctctt catcgagcac aacatggatc tcgtcgcctg cgccgattgg gtcgtggacc
     1741 tcgggcccga gggtggggaa aacggaggcc gcatcgtggc gcagggcccg ccggaactcg
     1801 tggccgaagc ggccgacagt cacacgggcc gctacttgaa gctcgcgctg agcggcacgc
     1861 gtgttaccgc gccgaagacc gccgccgcct cgacgccggc tgctccggcg gccacgccga
     1921 gtgcgcgtgc ttcagcgacg agcggcatgc gggccgccac ccgtgaaacg cgacgcacga
     1981 aggcgcgctg acggcccgcg ccgggccctc ggcgctcagc cgaagtcctt ctcgacgcgc
     2041 tcctggtcct ctttgcagcg gatgcaaagc gtcgtctcgg gtcgtgcctc gaggcgcttc
     2101 acgctgatct tgtcgccgca atcgtcacac acgccgaacg tgccggcgtc gatcttgtcg
     2161 atcgcctttt ggatcttgtc gagaaacgct ttctcgcgcc cgcgcaggcg gaacgtgaag
     2221 gactgcaggt attcgctcga cgcgaggtcc atctcgtccg gaaggtcgtc ggtgtccagg
     2281 gccatgtcct gatcgagcgt ctgctgagcg cgtttgatga tctcctcgcg ctttgcctcg
     2341 agcatgtccc ggaacttctt gagctggact ttggtcatga ctatgccgtg gtgttaggcc
     2401 cgttggccgg tctcggtggg ctcaacaagc taggtcccga aatgatgttc gtcaacggga
     2461 acagacgtgc gagccaaccg ccgaggcgcg cgaacgcttc cagaagaaaa atttcgggtg
     2521 gcgggccgct tgcgcgaacc tctgtcggaa ccgagcgtca gcggccgtcg cggtaggcac
     2581 gcacggcatt gacgatgccg tcggcgagtt tttgccgata gtcgggcgtc gcgagccgaa
     2641 gctcgcccgg cgcgctcgag atgaacgagg tttcgaagag caccgccggc atcgtcgcgc
     2701 cggcgagcac gtagaagccg gcacggcgca cgccgagatc gggcacctcg ggataacgtg
     2761 gagcgagcga ggcgagcgtg gcgcgctgca agagctcggc gagccgctcc gagcgttgga
     2821 cgacggaacg atcgagcacg gagctcagcg cgttggcgag ctcggaggcg gcggcggcgg
     2881 atgccgagtt ctcgcgcgcg gcgatgcgcg ccgacagcgt gtcgcgcgag ccgtcgagca
     2941 cgaagctcat gacgcccttg ccgccgccgt cctcgctcgc gttgcagtga atcgaaatca
     3001 agaggtcggc gccgaacgcg ttcgcgcgcg cggtgcgctc gtcgagcgcc acgtacgtat
     3061 cggtgtcgcg cgtgagcagc gtggacacgc cgagctcgcg cgcgaggagc ggcgccgcgc
     3121 gatgcgcaac gtcgagcgtc acgtcttttt cgcgcaagcc accgggtccg gtagcgcccg
     3181 gatcgttccc gccatgcccc ggatcgagca cgacgcggcg aacggcgcgc gcgccgccga
     3241 cctgcggcga aaagcccacg ggcggctggt tcgacacgtc gatcacgagc cgaaatggct
     3301 cgggcaggta gaaaacgcgc cggtacgccg gctgcgataa gtcgagcacc acgcgcgtgc
     3361 ccgaaggctg cgcgccgacg cgcacgcgct cgacgagtcc accgaccgcg agcgcgcggc
     3421 gcgacttgcc gcgcacgttc aagagatcga cgacgaggcg cggcccgttg ctgccctccg
     3481 cggcgagcga gcgcacctcg aacagcgccg ggtgtgtcac gtgcacgacg acgcgagccg
     3541 cgtccttcgc tccgtaacgt tcgatttcgc cgatcgtcgc gggctccgcc ttcacaccgg
     3601 ccttgtcggg cacgacgacg gggccgccgc tcggcgccgc gtcgctcgcg ctcgcgctcg
     3661 gcaaacccgc gtccgctgct tgctcggcgg caggctccga cacgcgaaac gccgcgagcg
     3721 tcgcgagtgc ctcgtcggca agcgcgcgac aacgtgcgtc cgcgccccgt gcccgctccg
     3781 cggccacttg ccgataagcg agcgccggat cgtgacgcag ctccgcatcg agcagcgcgc
     3841 gcctgagcgc cggagcgcag cgctgactac gccgtgcctc cgccgcctgt ccccaaagct
     3901 cgagcgcttc gagcgcgtcg gcttcgcgat gctcgacccg aaagagccgc tcccgaagct
     3961 cggccgcctc gacgaagagc ggcgcggctt gcgccgggtc gagcttggtg gccgcaatgg
     4021 cgagcgcgtc agcgcgcgcg acggtttcag cccgcggaga gagcgcagga gcagaagcgg
     4081 cagcctttgc aggaaccggc tcgggaggcg tctccgcgcg cgcacag
//
LOCUS       DATIML010000923         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4239295, whole genome shotgun sequence.
ACCESSION   DATIML010000923 DATIML010000000
VERSION     DATIML010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4239295"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2009
                     /locus_tag="VLJ38_16000"
     CDS             <1..>2009
                     /locus_tag="VLJ38_16000"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU41082.1"
                     /translation="HSGLWLVLAARLVMILLALAGTVAGIEYARRLAGKSAALIAAFA
                     LALFPPLLVYSHRTLQEAASAPLVVLVPLLLLERGPRAAMWAGVAAGVATLLRFQCAM
                     LAATFFVGLVFQQRWADLRAYTKAGALVALGGGLLDWFTWGRPFHSFIAYIEFNLIKS
                     GASTFGVAPRSYFAWTLWTSSGPAILLVGVGLVVGGIRRAPAAFAAVALFVLLHSAIP
                     HKEFRFILPIFPLMLAIGAAGIADLLDRYWRRAWAAGVVTGVVSLAFIKAARGEHYAN
                     LGQYLGTPRANDSVWDTEEEPNLLLADAGVEPDVCGVLMLGVRAAFTGGYSYLHRHVP
                     LFYRFQACDESKSANYVIAARDNTNIPPEFHLVHTRHGYGLYHRDGTCAPPPADYSGM
                     LDGADDMGLGRAPIIQPDPHELRISAGSSAAAFVHGFGNGEHLECRLVRWAVDTKAQM
                     AFPLQPTGTSYSLTFTAQPYYRSLPQAVRVALNGHALGDFDLEEGWRGYQSFVQGGFL
                     RSGRNVVDFTFTHAARAERNDTRHLAALFDQIALAPADTSVHIDAGTSEARAYLASGF
                     SGDERNRDGTFVWSDGPKSVVTVTLRDKPGPTVFQVDARAYQAVAPLAVDVSVNGKRA
                     GALRFGLALARSSALLPAGTLQVGHNTIELSYAKTAKPSEHERGS"
BASE COUNT          301 a          698 c          636 g          374 t
ORIGIN      
        1 tgcactcggg cctctggctc gtcctcgccg cgcgcctcgt gatgatcctc ctcgcgctcg
       61 cgggtacggt ggcgggcatc gaatacgctc ggcgcctggc cggcaaatcc gcggcgctga
      121 ttgcggcgtt cgcgctcgcg ctgttcccgc cgctgctcgt ctactcgcat cgcacgttgc
      181 aagaagcggc gagcgcgccg ctcgtggtgc tcgtgccctt gctcctgctc gaacgcgggc
      241 cacgcgcggc catgtgggcg ggtgtggcgg cgggtgtcgc gacgctcttg cgctttcagt
      301 gcgcgatgct cgcagcgacc tttttcgtcg gtctcgtctt tcagcaacgc tgggccgatc
      361 tcagggcgta cacgaaagca ggcgcgctcg tggccctcgg cggcggacta ctcgactggt
      421 tcacttgggg tcgcccgttt cactcgttca tcgcgtacat cgagttcaac ctgatcaaga
      481 gcggcgcgtc gaccttcggc gtcgctccgc gtagctactt tgcgtggacg ctctggacgt
      541 cgtcggggcc agccatcttg ctggtgggag tggggctcgt cgtcggcggc attcgccgcg
      601 cgccagccgc cttcgctgcg gtggcgctgt tcgtgctgct gcactcggcg atcccgcaca
      661 aggaatttcg cttcattttg ccgatcttcc cgctcatgtt ggccatcggt gcagcgggga
      721 ttgccgacct gctcgaccgc tattggcggc gtgcttgggc ggccggcgtc gtgaccggcg
      781 tggtttcgct cgcgttcatc aaggcggccc ggggcgagca ctacgccaat ctgggtcaat
      841 acctgggcac gccgcgggcg aacgactccg tctgggatac tgaggaagag ccgaatctgt
      901 tgctcgccga cgcgggcgtc gagccggacg tttgcggcgt gctgatgctc ggcgtgcgcg
      961 cggcgttcac cggcggatat tcgtacctac atcgccacgt tccgctcttt tatcgtttcc
     1021 aagcctgtga cgaatccaaa tccgccaatt acgtgatcgc cgcgcgcgac aacacgaaca
     1081 tcccgcccga atttcacctc gtccacacgc gtcacggcta cggcctctac catcgtgacg
     1141 gcacctgcgc gccgcccccg gccgactaca gcggcatgct cgacggcgcc gacgacatgg
     1201 gcctcggccg ggcgcccatc atccaacccg atcctcacga actccgcatc agcgcgggct
     1261 cgagcgccgc cgccttcgtg cacggcttcg gcaacggcga acacctcgaa tgccggctcg
     1321 tccgctgggc ggtcgacacc aaggcgcaga tggcgttccc gctccaaccc acgggcacga
     1381 gctattccct cacctttaca gcccagccat actaccgctc gttaccgcaa gcggtgcggg
     1441 tggcgctgaa tggacacgcg ctcggggact tcgatttaga agagggctgg cgcggctacc
     1501 aatctttcgt tcaagggggc ttcctgcgtt ccggacggaa cgtcgtggac tttacgttta
     1561 cgcacgctgc ccgagcggaa cgcaacgaca cgcgccatct cgctgccctc ttcgaccaaa
     1621 tcgcgctcgc gccagcggac acctccgtgc acatcgacgc cggcacgtcg gaagcgcgcg
     1681 cctacctcgc cagcggcttc agcggcgacg agcgcaaccg tgacggcacg ttcgtctgga
     1741 gcgacggccc caagtcggtc gtcaccgtca cgttaaggga caaaccgggc cccaccgtat
     1801 ttcaggtaga cgcacgggcg taccaggcgg tcgcgccgct cgcggtcgac gtgagtgtga
     1861 atggcaagcg ggccggagcg ctacgattcg ggctggcgct cgcacgttcg tccgcgctcc
     1921 tgcccgccgg cacgctgcaa gtcggacaca acaccatcga gctttcgtac gcaaagactg
     1981 caaaaccgag cgagcacgag cgcgggtcg
//
LOCUS       DATIML010000924         3968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2506424, whole genome shotgun sequence.
ACCESSION   DATIML010000924 DATIML010000000
VERSION     DATIML010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3968
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2506424"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            360..1334
                     /locus_tag="VLJ38_16005"
     CDS             360..1334
                     /locus_tag="VLJ38_16005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41083.1"
                     /translation="MGALCFARLVAAAEATEPIRIEYQAEPGCPSADEFSGQVFRRTA
                     SARLARTAELARTFVVSIERRGNGLVGSLVVRQADGTTESREVAGPECGEVAKVLALA
                     TALAIDPEASLAPNPEPSAPPPEPPPKSEPEPSEATPAPSETREDASAKAWIVSLGAA
                     IEGAITPVPAYGGSVGVGWRAPHGRGALSAAGVDVTYLRAPTHAVDTAAASFQFLYAR
                     PALCAVALKWHLESGVAPCLSAELGAVTGAGSSIAHASTRSRFWATVDPTLELHQALG
                     AGFFLEAALGAVLPITRYEYVFRNPTTHVYTVPVVAVIGAVRLGVRLF"
     gene            complement(1365..2342)
                     /locus_tag="VLJ38_16010"
     CDS             complement(1365..2342)
                     /locus_tag="VLJ38_16010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41084.1"
                     /translation="MATHRNRTQAFVVGSTLFALACQDDFPLGSWGQTTPSSTPTTSS
                     TSSGTTMPPPPPPPQPSPMCGEAATPVPLTTSGTQVGTTNVYTNWTWPAPIDSLEWDL
                     VIETDPPNDGYYWLHQFSFVNSGTSGFLGLQAHGGYTDPATPGPIDFTKMAVFWISGP
                     PTDAELGDFTGKNGRKAQVTQYGVAWMTIHGKFDWSACHVYHLKLGPDGTTDAGDIWY
                     GAWITDKTTGVEAFLGRMLIPASWGQLQTLSVMETTRIDNAATDVPVVTCSDPEPASA
                     IFGMPTANAGSVFPAAPQSRFAMPPRCATSRFAILPEGVRHELGVRAMP"
     gene            complement(2326..3045)
                     /locus_tag="VLJ38_16015"
     CDS             complement(2326..3045)
                     /locus_tag="VLJ38_16015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41085.1"
                     /translation="MSDPVRLLDGGADEFEAELLRAGRADAVSAHSRKQILAGVGIGG
                     LLTASTMASGVRAAAKTWLTTVGAGTVGAVAIWAGVHAATSKPAPLPVQPAAKVAAPV
                     QAAFQHKPAEPVVVSTAEPEAAPATAALPPKPAAHNATTPDTSLAAELTAIEQARAAF
                     LAHDYGQALRLLDDYARRFPKPQLRSEATVMRVESLARRGDRDDAARIGRDFLLNHPN
                     GPYAQRVRSLIGEGSASGHAP"
     gene            complement(3042..3656)
                     /locus_tag="VLJ38_16020"
     CDS             complement(3042..3656)
                     /locus_tag="VLJ38_16020"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41086.1"
                     /translation="MSVTSSAGSPAETESGDGAGPSETLTAPAQPLALKSLVTEHLDF
                     VWRSLRRFGVPAADVDDATQQVFLIANDKLSRINPGSERSFLVGVATRVASHVRRSYH
                     RREAAELRLSVNPHEATPNPEELTQRLEARALLDRVLDGMPEDLRAVFVLFELEELSI
                     DQTASLLLLPRGTVATRLRRAREVFHEQAKLVGAGISTKRRPGP"
BASE COUNT          604 a         1308 c         1389 g          667 t
ORIGIN      
        1 gcgtcgagca gcatgatggc gacgaccacg gcgctgccaa tcaggacgcg ccgaaaacga
       61 tcgcgcggaa aagcccgctc cagcaggttg gggggcgtgc tggtgctcat ggctggcgat
      121 ctggggaagc taacgtgggc atgaactccg tcagtcggtt aacccttgct tgaggagaac
      181 gcttccccat tagactggaa aactccagcc gcatcgtgcg tcgtcggctc ggccgctcgc
      241 tcggatcctg acactgaccc gtcgggtgcg ctcgtgccac ggcgttgtcc cattcgggcc
      301 acgaggataa aaagctgtct ctgaaggctc acctaggact gatcgcggcg ccgctcgtgg
      361 tgggagcgct ctgtttcgcg cgtctcgtcg cggccgcgga ggcgacggag ccgatccgca
      421 tcgagtatca agccgaaccg ggctgtccga gcgccgacga gttcagcggc caggtctttc
      481 gacgtacggc gagcgcgcgg ctcgcgagga cggcggagct ggcgcgcacc ttcgtcgtca
      541 gcatcgagcg gcgcggcaac ggcctcgtcg gcagcctcgt cgtacgccag gccgacggca
      601 cgaccgagtc gcgggaagtc gccggtcccg agtgcggcga agtcgcgaag gtgctcgcgc
      661 tcgccacggc attggcgatc gatcccgagg cttcgctcgc gccgaatccg gaaccgagcg
      721 caccgccgcc cgaacccccg cccaagtccg agcccgagcc gtccgaagcg acgcctgcgc
      781 cgagtgagac gcgtgaggac gcgagcgcga aagcgtggat cgtctcgctg ggtgccgcga
      841 tcgaaggcgc gatcacccct gtccctgcct acggcggttc ggtcggcgtc ggctggcgcg
      901 cgccgcacgg ccggggcgcg ctctccgctg cgggcgtcga tgtgacgtac ctgcgcgcgc
      961 cgacgcacgc cgtcgatacc gcggcggctt cgttccagtt cctgtacgcg cggcccgctc
     1021 tctgcgccgt ggcactcaag tggcacctcg agtccggcgt tgcgccctgc ctgagcgcgg
     1081 agctcggcgc cgtgacgggt gcgggttcga gtatcgcgca cgcttcgacg cgcagtcgct
     1141 tctgggccac ggtcgatccc acgctcgagc tgcaccaagc gctcggcgcc ggtttctttc
     1201 tcgaggcggc gctcggcgcc gtgctgccga tcacgaggta tgaatacgtg ttccgcaatc
     1261 cgaccacgca cgtctacacg gtgccggtcg tcgccgtgat cggcgccgtg cgcttgggcg
     1321 ttcggctctt ttagggcacg ccgtcgaagg cactgcccac ggcgttacgg catcgcgcgc
     1381 acaccgagct cgtgacgcac accttcgggc aggatcgcga agcgcgaggt cgcgcagcgg
     1441 ggcggcatcg cgaagcgact ctgcggcgcg gccgggaaga cggagccggc gttcgccgtc
     1501 ggcatgccga agatcgcgga agccggttcg ggatcggagc acgtcacgac ggggacgtcg
     1561 gtcgcagcat tgtcgatgcg cgtcgtttcc atcacgctca gcgtctgcag ctgaccccag
     1621 ctcgcgggga tcagcatgcg accgaggaac gcttcgacgc cggtcgtctt gtccgtgatc
     1681 caggcgccgt accagatgtc ccctgcatcg gtggtgccgt cgggtccgag cttcaggtgg
     1741 tagacgtgac aggcgctcca gtcgaatttg ccgtggatcg tcatccacgc gacgccgtac
     1801 tgggtcacct gcgctttgcg gccgttcttg cccgtgaagt cgccgagctc ggcgtccgtc
     1861 ggtggaccgg agatccagaa caccgccatt ttcgtgaaat cgatgggtcc gggggttgcc
     1921 ggatcggtgt agccgccgtg cgcctgcagg ccgaggaagc ccgaggtccc gctgttgacg
     1981 aacgagaact ggtgcagcca gtagtaaccg tcgttcggcg ggtccgtctc gatcacgaga
     2041 tcccactcga gtgaatcgat gggcgccggc caggtccaat tcgtgtaaac gttggtcgta
     2101 ccgacctgcg tgcccgacgt cgtgagcggg acgggcgtcg ccgcctcgcc gcacatcgga
     2161 gacggctgcg gcggtggcgg cggtggtggc atcgtcgtgc cgctcgatgt gctcgaggtc
     2221 gtcggcgtgc tggacggtgt cgtctgtccc caggaaccga gcggaaaatc gtcttggcac
     2281 gcgagcgcga agagcgtgct gccgacgacg aaagcctgcg tgcggttacg gtgcgtggcc
     2341 actcgccgaa ccttcgccga tcaacgagcg cacccgctgc gcgtacggtc cgttcggatg
     2401 gttcagcaag aaatcgcgac cgatgcgggc ggcgtcgtcg cgatcgccgc gtcgggcgag
     2461 cgattcgacg cgcatgacgg tcgcttcgct gcggagctgc ggcttgggaa agcgccgcgc
     2521 atagtcgtcg agtaagcgca gcgcctgccc gtagtcgtgc gccaggaagg cggcgcgcgc
     2581 ttgttcgatg gccgtgagct cggcggcaag agacgtgtcg ggtgtggtgg cgttgtgcgc
     2641 tgcgggtttt ggcggcagcg cggccgtcgc gggtgcagct tcgggctcgg ccgtgctcac
     2701 gacgacgggc tccgcgggct tgtgctggaa ggcggcttgc acgggtgccg ccactttggc
     2761 ggccggctgc acgggcaacg gcgcgggttt gctcgtcgcg gcgtgcacgc ccgcccagat
     2821 cgcgacggcg ccgacggtgc cggcgccgac cgtcgtgagc caggttttgg cagcagcgcg
     2881 cacgccgctc gccatggtgc tcgccgtgag gagcccgccg atgcccacgc cagcgaggat
     2941 ctgcttccgg ctgtgcgccg acacggcgtc ggcgcgcccg gcccgaagca gttccgcttc
     3001 gaactcgtcg gctccgccgt cgagcagtct cactggatca ctcatgggcc cggtcttctc
     3061 ttggtactta tgcccgcacc gaccaatttt gcttgctcgt gaaaaacttc ccgagcgcgc
     3121 ctgagccggg tggccactgt accccgaggt aggaggagga ggctcgcggt ctggtcgatc
     3181 gagagctcct ccagctcgaa cagcacgaaa acggctcgaa ggtcttccgg catgccgtcg
     3241 agcacgcggt cgagcagggc gcgcgcctcc agccgctgcg tgagctcctc cgggttcggg
     3301 gtcgcttcat ggggattgac ggaaaggcgc aactctgctg cctcgcgccg gtgatacgag
     3361 cgcctgacgt gtgaagccac gcgcgtcgcg acgccgacca gaaacgagcg ttcgctgccc
     3421 gggttgatgc gcgaaagctt gtcgttcgcg atcaaaaata cttgttgcgt cgcgtcgtcg
     3481 acgtcggcgg cggggacacc gaagcgacgc agcgaacgcc acacgaagtc gagatgctcc
     3541 gtcacgaggc tcttcagcgc gagcggctgc gccggcgcgg ttagcgtctc actcggtccc
     3601 gcgccgtcgc cggactctgt ctcagcgggc gagcccgcgc tcgacgtgac gctcatggtc
     3661 cgtgacaggg gagcagaacc aggagtctac ggtcgacggc cggcgctcgc caccatcctc
     3721 gcgcgccaga tccaaaatgg tgtagcgcta aaaaaattcg gcgcgggatt cgcagcgaac
     3781 gcacgcagac ttcgcgacgt cgaattcgat cgagccaagc gagttcggcc gggaacgaga
     3841 tcagttgccg caccgctgcg tcaagccgat tccactccgc gcgtaggttt tcgatcccgc
     3901 gcgattgatg gagaaaaacc gcatccccgc cgcgcgccct gcgcctgctt tcgatcgctg
     3961 cgacgcac
//
LOCUS       DATIML010000925         3391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1934611, whole genome shotgun sequence.
ACCESSION   DATIML010000925 DATIML010000000
VERSION     DATIML010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934611"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..622
                     /locus_tag="VLJ38_16025"
     CDS             <1..622
                     /locus_tag="VLJ38_16025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41087.1"
                     /translation="VDVSAFALQVFQAFEQAGMPEAEVGVLLGAELGPRLLPHAPPVV
                     LRALVRGIATLEPPPPLSATQWTTLLAADLGAAPLALFRRLPESALGVAVDAACRAAR
                     SDALAVLWARFPAALTRIASDSFTDATASARRGALLVTAPPDVAPAVLAELADTDELM
                     RGPLATLEAVRRFLHAQIAARGPAFRDAYARLDEIEAHFEDVREKA"
     gene            656..1675
                     /locus_tag="VLJ38_16030"
     CDS             656..1675
                     /locus_tag="VLJ38_16030"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HSU41088.1"
                     /translation="MRVVCLRGGFGLEKLMLEERPDPVPGPGEVLLRMRAASLNFRDV
                     SIARGTYDPRLALPLVLGTDGVGEIAVRGVGATRFELGERVCPLFARGWYDGPPTRAT
                     TRSTLGGPLDGTFAELLVAREDDLVRAPPGLTDDEAATLGCAGVTAYRTLFEIAKVEA
                     GTRVLVIGTGGVATFALALGHAVGAQIMVVSRSAEKLRHAQSLGAEHAVNATEQPEWG
                     VAVRELAGGEGVELVVELGGAATLAQSLRAVRAGGTLALIGHTPDGSHTPSLVPVVMR
                     EIRLQGVLVGPRSSFEAFTSFLTRTRVRPAIDRVFALAEFRGAFETLARGDAFGKTCL
                     RFATP"
     gene            1887..3080
                     /locus_tag="VLJ38_16035"
     CDS             1887..3080
                     /locus_tag="VLJ38_16035"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSU41089.1"
                     /translation="MSQVPSAPVGALSRWLDVAAGERRASGAVIENIQVLRAIAAALV
                     VFVHLEVFLRAFGLAPFGHGGVDLFFVISGFIMVYTTRRKPVGPAAFLLNRFLRIAPL
                     YWVLTAAVYAVALVAPSLLGATSKDPVQLCESFLFIPFRKSNGLIQPVLFVGWTLNYE
                     MFFYALFAVGLLDPKRERGVLAVIAALVALVALGRVLSSPAAVYAFYTDPVVLEFGFG
                     MALALSVTRLRVNTRAGRLALLALGALALVTLVTAWYFLPDVHRVFKYGVPAALIVAV
                     AVTLHQSGLTLSNRLLLALGNASFALYLTHPFVAQAAQKLGTRLGLNPLTGVLGAGAT
                     LAVVCLVGLGTHLALERPLTSACRRLFVPRAGRVVAAEVPPLTAAPLLEGVTRAVDVR
                     GQDGA"
     gene            complement(3120..>3391)
                     /locus_tag="VLJ38_16040"
     CDS             complement(3120..>3391)
                     /locus_tag="VLJ38_16040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41090.1"
                     /translation="AAGQNEARYACRGEHGCSIVRGKIDCDVSVARSGDACDPAFEGT
                     FSCTEDALAIVRCSGGHFVRDENCRRGTRCLAEPGSTRCAKPDKT"
BASE COUNT          423 a         1219 c         1158 g          591 t
ORIGIN      
        1 cgtcgacgtc tccgctttcg cgctgcaagt ctttcaagcg ttcgagcaag cgggcatgcc
       61 ggaagcggag gtcggcgtgc tgctcggcgc ggagctcggg ccaaggctct tgccgcacgc
      121 gccgcccgtc gtgctccgcg cgctcgtccg agggatcgcg acgctcgagc cgccgccgcc
      181 gctcagcgcg acccagtgga cgacactgct cgcggccgat ctcggtgcgg cgccgctcgc
      241 gctctttcgc cgcttgcccg agagtgcgct cggcgtcgcg gtggacgcgg cctgccgtgc
      301 ggcacgcagc gacgcgctcg ccgtgctctg ggcgcgcttt cccgcggcgc tcacgcgcat
      361 cgcgagcgac tcgttcaccg acgccaccgc gagcgcccgg cgcggcgcgc tgctcgtcac
      421 ggcgcccccc gacgtggcgc ccgccgtgct cgccgagctc gccgacaccg acgagctcat
      481 gcgtggcccg ctggcgacgc tcgaagccgt gcggcgcttc ttgcatgcgc aaattgccgc
      541 gcgcgggccg gcatttcggg acgcctacgc ccgcctcgac gaaatcgagg cgcacttcga
      601 ggacgtacgc gaaaaggcct gacgcgcgac gaccgtcgcg taaaatcctc ggaccatgcg
      661 cgtcgtgtgt ttgcggggcg gcttcggcct cgaaaagctc atgctcgagg aacggcctga
      721 tccagtgccg ggaccaggcg aagtcttgct gcgcatgcgc gcggcgtcgc tcaacttccg
      781 tgacgtgtcg atcgcgcgcg gcacctacga ccctcggctc gcattacccc tcgtgctcgg
      841 tacggacggc gtcggggaaa ttgccgtgcg cggcgtcggg gcgacgcgct tcgagctcgg
      901 cgagcgcgtc tgtccgctct tcgcgcgcgg ctggtacgac gggccgccca cgcgcgccac
      961 gacgcggagc acgctcgggg gaccgctcga cggcaccttc gccgagctcc tcgtcgcgcg
     1021 cgaagacgac ctcgtgcgcg cgccgccggg gctcacggac gacgaagcgg caaccctcgg
     1081 ctgcgcgggc gtcacggcgt atcgcacttt gttcgaaatc gccaaggtcg aagccggcac
     1141 gcgcgtgctc gtcatcggta cgggcggggt cgcgaccttc gcgctggcgc tcggccacgc
     1201 cgtaggcgcg cagatcatgg tcgtgagccg cagcgccgaa aagttgcggc acgcgcagtc
     1261 gctcggtgcc gagcacgccg tcaacgcgac ggagcagccg gagtggggcg tcgccgtgcg
     1321 tgagctcgcc ggcggcgaag gcgtcgagct cgtcgtggag ctcggcggcg cggcaacgct
     1381 cgcgcagtcg ttacgtgccg tgcgcgcggg cggcacgctg gcgctcatcg ggcacacgcc
     1441 ggacggctcg cacacaccga gcctcgtgcc ggtcgtcatg cgcgagatcc gcctgcaagg
     1501 cgtgctcgtg gggccgcgct cgtcgttcga ggcgttcacg agctttttga cgcggacgcg
     1561 cgtgcgcccg gcgatcgatc gcgtctttgc gctcgcggag tttcgcggcg cgttcgagac
     1621 gctcgcgcgt ggcgacgcct tcggtaagac gtgcttgcgc tttgccacgc cttgacgctg
     1681 gcgcgattcg aacggcgccg cagcgctcgc cgtggcaaga agacacaacg cggtcgacac
     1741 gcgatgacgt ggctgtttca cgcgcgatac acgagcgtgc agtcgcatct cgccacggca
     1801 attgacgatg gtagtcgctc cgcgcttggc gcatgctcct tcgcgcgggc gtcaactgac
     1861 gcgcgctctg ccggcgaaga ggaacgatgt ctcaagtacc gagcgcgccg gtcggcgcct
     1921 tgtctcgttg gctcgacgta gctgcaggcg aacggcgcgc aagcggcgcc gtgatcgaga
     1981 atatccaagt cctgcgcgcg atcgccgcgg cgctcgtcgt cttcgtccac ctcgaagtct
     2041 tcctgcgcgc gttcgggctc gcgcccttcg ggcacggcgg cgtggatctc ttcttcgtga
     2101 tttctgggtt catcatggtg tacacgacgc gccggaaacc cgtcgggccg gccgcgtttc
     2161 tcttgaaccg cttcctgcgc atcgcgccgc tctattgggt gctcacggcc gccgtgtacg
     2221 ccgtcgcgct cgtcgcgccc tcgctgctcg gcgcgacgtc gaaggatccc gtgcagcttt
     2281 gcgagtcgtt cctgttcatc ccgtttcgta aatcgaacgg cctgattcag ccggtgctgt
     2341 tcgtgggctg gacgctcaac tacgagatgt tcttctacgc gctcttcgcc gtgggcttgc
     2401 tggacccgaa gcgcgagcgc ggcgtgctcg cggtgatcgc ggcgctcgtc gcgctcgtcg
     2461 cgctcggtcg cgtgctgtcg tccccggccg ccgtctacgc cttctacacg gacccggtcg
     2521 tgctcgagtt cggcttcggc atggcactcg cgctctccgt cacgagacta cgcgtgaata
     2581 cgcgcgccgg tcgcctggct ttgctcgcgc tcggtgcgct cgcgctcgtg acgctcgtga
     2641 ccgcttggta cttcttgccg gacgtgcacc gcgtcttcaa gtacggcgtc ccggcggccc
     2701 tcatcgtcgc cgtcgccgtc acgctgcacc agtcgggcct cacgctttcc aatcgcctgt
     2761 tgctcgcgct cggcaacgca agcttcgcgc tctatctcac gcacccgttc gtcgcgcagg
     2821 cggcgcaaaa gctcgggacg cgcctgggcc tgaaccccct cacgggcgtg ctcggcgccg
     2881 gcgcaacttt ggccgtggtg tgcctcgtcg ggctcggcac gcacctggcg ctcgaacggc
     2941 cgctcacgag cgcctgccgc cggctgttcg ttccacgcgc aggccgcgtc gtcgcggccg
     3001 aagtcccgcc gctcaccgcc gccccgctgc tcgaaggcgt cacgcgagcc gtcgacgttc
     3061 gcgggcaaga cggagcttga acgcattcgt cggcgcggcc gcgcgctgag acgccgagct
     3121 cacgttttgt ccggtttcgc acagcgcgtg ctgcccggtt cggcgaggca gcgcgtgccg
     3181 cgcctgcagt tctcgtcccg cacgaagtga ccgccgctgc agcggacgat ggcgagcgcg
     3241 tcctcggtgc aggaaaaagt cccttcgaac gcggggtcac acgcgtcgcc gctgcgcgcg
     3301 accgaaacgt cgcagtcgat ttttccgcgg acgatgctgc aaccgtgctc gccgcgacat
     3361 gcgtagcgcg cttcgttttg tcccgcggcg c
//
LOCUS       DATIML010000926         2550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5686206, whole genome shotgun sequence.
ACCESSION   DATIML010000926 DATIML010000000
VERSION     DATIML010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5686206"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VLJ38_16045"
     CDS             <1..724
                     /locus_tag="VLJ38_16045"
                     /inference="COORDINATES: protein motif:HMM:NF019311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fibro-slime domain-containing protein"
                     /protein_id="HSU41091.1"
                     /translation="VSTQGTMGCGQQILGIVRDFKRGDQSGGHPDFQTYQGQGQPKAV
                     AATLGADQKPVFDSSALTVNDCTADTDGNKAKRSCFTSLDDFNEWYNDLADVNDPYYV
                     FFSLEPSGNKATFHSSAFFPLDGKGFGNQGFKDNFAFTTEVHTTFQYNGGETFSFTGD
                     DDLWVFINKKLAIDLGGLHSQQSATVNLDTDAQKLGIKKGTVYPLDLFHAERHTDASN
                     FKIDTTLYFVDCGVVVPSGPVR"
     gene            complement(782..1561)
                     /locus_tag="VLJ38_16050"
     CDS             complement(782..1561)
                     /locus_tag="VLJ38_16050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HSU41092.1"
                     /translation="MKPLAALTPVEARALRGVLFDLDDTLLDHGKLTEGAYSALFRLR
                     EAGLELYAVTGRPSAWVRLIARLFPVNGGVGENGGGLVGPGGKLLDSVSKSERETRSA
                     RLATLVAEVRRTFAELEPADDANERLTDFTFDVGEHRRVAPERVAEVSAFARARGATV
                     HVSSVHLHVGFDSVDKASGSVRLLRLLAGADPSAATTRYAFVGDSENDAACFGAFRTT
                     IGVANLRGRPTLAPRFLTTAPRGEGFAELARVLGALRASAE"
     gene            complement(1601..>2550)
                     /locus_tag="VLJ38_16055"
     CDS             complement(1601..>2550)
                     /locus_tag="VLJ38_16055"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HSU41093.1"
                     /translation="RIARAAERRLAFGLPSDDTTAFRLVHAEGDDLPGLIVDRLGDVL
                     SIQIGTVGIKLREDAVFAALERFGARAIVDRTPERLAKSEGFAPRAGVIRGDETLDAF
                     EFKERGLLFRVPLELGQKTGFYLDQRPLRARVEALAQGRRVLDTFTYVGALALSAARG
                     GATLVEAVDNSALAVEVGAECAALNGLESKVHFERADAHEALAHVGRQGGFELVICDP
                     PKLAPSRSGRGRALEAMRRLAGHGARATKPGGLFVLCSCSAAIGMGELTRALALGARD
                     VGARATVLERHTQGADHPVPAAFPEGLYLSSVIATIDVA"
BASE COUNT          424 a          918 c          842 g          366 t
ORIGIN      
        1 ggtgagcacg cagggcacga tgggctgcgg ccagcagatc ctcggcatcg tgcgcgactt
       61 caagcgcggc gatcagtcgg gtgggcaccc ggactttcag acttaccagg gccagggcca
      121 gccgaaagcg gtcgcggcca cgctcggcgc cgaccagaag ccagtgttcg actcgagcgc
      181 gctcaccgtg aacgactgca ccgccgacac cgacggcaac aaagccaagc gctcctgttt
      241 cacgagcctc gacgacttca acgagtggta caacgatctc gcggacgtca acgaccccta
      301 ttacgtcttc ttctcgctcg agccgagcgg caacaaggcc accttccact cgagcgcctt
      361 tttccccctc gacggcaagg gcttcggcaa tcagggcttc aaagacaact tcgcgttcac
      421 gacggaagtt cacaccacgt tccagtacaa cggcggcgag acgttctcgt tcaccggtga
      481 cgatgatttg tgggtgttca tcaacaagaa gctcgccatc gatctcggcg gcttgcactc
      541 gcagcagagc gcgacggtga atctcgacac cgacgcgcaa aagctcggca tcaagaaggg
      601 caccgtctac ccgctggacc tcttccacgc cgagcgccac acggacgcgt cgaacttcaa
      661 gatcgacacg actctgtact tcgtcgactg cggcgtcgtc gtcccgtccg gtccggtgcg
      721 ctgaaggcga cgcaacgcgg gtgacgtcga gtcgctccgc gtacggcgcc gtcgcgtcgc
      781 gttactccgc ggacgcgcgc agcgcaccga gcacgcgcgc gagctcggcg aagccctcac
      841 cgcgcggcgc cgtcgtcagg aagcgcggag cgagcgtcgg acggccgcgc agattggcga
      901 cgccgatcgt cgtgcggaac gcgccgaaac acgcggcgtc gttctcgctg tcacccacga
      961 acgcgtagcg cgtcgtggcg gcgctcggat ccgctccagc gagcaggcgt aagagccgca
     1021 cgctgcccga cgctttgtcc acggaatcga agccgacgtg caggtgcacg ctcgagacgt
     1081 gcacggtcgc gccgcgcgcg cgcgcgaaag cgctcacctc cgcgacgcgt tcgggggcga
     1141 cgcgccggtg ctccccgaca tcgaacgtga agtcggtgag ccgctcgttc gcgtcgtccg
     1201 ccggctcgag ctcggcgaac gtccgccgca cctcggcgac caacgtcgcg agccgagcgc
     1261 tccgcgtctc ccgttcgctc ttgctcaccg agtccaagag cttgccgccc ggccccacga
     1321 gcccgccgcc gttctcgccc acgccgccgt tgaccggaaa cagccgcgcg atcagccgca
     1381 cccacgcgct cggtcgcccc gtgacggcat agagctcgag cccggcttcg cgcaggcgaa
     1441 agagcgcgga gtacgcgcct tccgtcagct tgccgtgatc gagcagcgtg tcgtccagat
     1501 cgaagagcac gccgcgcagc gcgcgagctt cgacgggagt gagcgcggcg aggggcttca
     1561 tgcgcatcga cttcggcggt ttcggactgg cgctttccgc tcacgccacg tcgatcgtcg
     1621 cgatcaccga cgaaagatag agcccttcgg ggaacgccgc ggggaccggg tgatcggcgc
     1681 cttgcgtgtg gcgttcgagc acggtggcgc gcgcgcccac gtcccgtgct ccgagcgcta
     1741 gcgcgcgcgt gagctccccc atgccgatcg cagccgagca ggagcaaagg acgaagagtc
     1801 cgccgggctt ggtcgcgcgc gcgccgtgtc ccgcgagcct tcgcatcgcc tcgagggcgc
     1861 ggccgcggcc cgaacggctc ggcgcgagct tcggcggatc gcaaatcacg agctcgaagc
     1921 cgccctgacg tccgacgtgg gcgagcgcct cgtgcgcgtc agcgcgctcg aaatgcacct
     1981 tcgactcgag gccgttcaag gcggcacact cggcgccgac ctcgacggcg agcgcgctgt
     2041 tatcgaccgc ttcgaccagc gtcgccccgc cgcgcgcagc cgagagcgcg agcgcgccga
     2101 cgtaggtgaa cgtgtcgagc acgcgccgcc cctgcgcgag cgcctcgacc cgcgcgcgga
     2161 gcggtcgttg gtccagataa aagccggtct tttgcccgag ctcgagcggc acgcggaaga
     2221 ggagcccgcg ctccttgaac tcgaacgcgt cgagcgtctc gtcgccgcga atcacaccgg
     2281 cgcgcggcgc gaagccttcg ctcttcgcca ggcgctcggg cgtgcggtcg acgatggcgc
     2341 gcgcgccgaa gcgctcgagc gccgcgaaca cggcgtcttc acgcagcttg atgcccaccg
     2401 tgccgatctg aatcgacagc acgtcaccga gccggtcgac gatgagcccc ggcaaatcgt
     2461 cgccttccgc gtgaaccagc cggaacgcag tcgtgtcgtc gctcgggagc ccgaaggcga
     2521 gccggcgttc ggcggcgcgg gcgatccgct
//
LOCUS       DATIML010000927         2891 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5686219, whole genome shotgun sequence.
ACCESSION   DATIML010000927 DATIML010000000
VERSION     DATIML010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5686219"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1327)
                     /locus_tag="VLJ38_16060"
     CDS             complement(<1..1327)
                     /locus_tag="VLJ38_16060"
                     /inference="COORDINATES: protein motif:HMM:NF019603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41094.1"
                     /translation="MAKPLSFTSKVFNVERLDFGSQSEQVVKGGRHLLPLLSKAFAGI
                     KQIGVIGWGSQGPAQAQNLRDSLAGTDIRVKVGLRSGSSSEKQAEQAGFTKANGTLGE
                     QFDVVRESDLVLLLISDAAQAELFGRVFELMRPGTTLGLSHGFLLGHMKNVGAKFPAN
                     INVVAVCPKGMGPSVRRLYVQGKEVNGAGINASFAVEQDVDGRATDIALGWSVALGSP
                     FTFQTTLESEYKSDIYGERGILLGAVHGIIESLYRRFVSQGMTRENAFLNAAESITGP
                     ISKTISKRGILAVYEGLDAAGKGEFEKAYAATYPAAREVMEEIYDEVSSGNEIRGVVL
                     AGERLKRRPMGKIDGTETWKVGASVRKQRDEAKIPVNPFTAGVYIATMMAQIDVLYGH
                     DHPGSEIANESVIECTDSLNPYMHARGVSYMIDNCSTTARLGARRWAPTF"
     gene            1429..2319
                     /gene="ilvY"
                     /locus_tag="VLJ38_16065"
     CDS             1429..2319
                     /gene="ilvY"
                     /locus_tag="VLJ38_16065"
                     /inference="COORDINATES: protein motif:HMM:NF008722.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HSU41095.1"
                     /translation="MTYDELHLFLHLSRSLHFGKTSRECHVSPSALSRTIQRLESEVG
                     RPLFVRDRRSVELAPAGEALKVHAAETLARWDALRARLSDSAERLTGTLGIFASVTAC
                     QSFLPDALASFRRRHPDIHIRLETGYATDALGMLSRGTVDVAVAALPARTPPGLVSRT
                     LLVTPLVFVGPASDCEVSRLVEERSIPWERVPVVLPATGPGRASAERFFRRRRVKPNV
                     YGEVPGNEAILSLVSLGCGVGIVPKIVLDKSPLRPALTNLELEGELGDLGVGVCAEKG
                     KLRNAVVRAFFASLEQGVQG"
     gene            2365..>2891
                     /locus_tag="VLJ38_16070"
     CDS             2365..>2891
                     /locus_tag="VLJ38_16070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41096.1"
                     /translation="MRLLFRLLGLGFVCGAIASACGGPDFTSAGSPHAGSAGMSAAGG
                     DVGLGGSSTGGDTSLAGMAGVPNGGAPAAGGTSAGTAGGGTTLCTGAKDCDDADPCTV
                     DTCDADGICANAAKCTGDQPLCCDGECGQCCGKADCDDQIDCTDDECFAGFCTNTPGS
                     CPNDTDYCSATGCVPR"
BASE COUNT          440 a          963 c          976 g          512 t
ORIGIN      
        1 cgaacgtcgg cgcccagcgg cgggcgccga ggcgcgccgt cgtggagcag ttgtcgatca
       61 tgtaggagac gccacgagcg tgcatgtacg ggttcagcga gtccgtgcac tcgatgacgc
      121 tctcgttcgc gatctccgag ccggggtgat cgtggccgta gaggacgtcg atttgcgcca
      181 tcatggtcgc gatgtagacg ccggccgtga aggggttgac cgggatcttg gcttcgtcgc
      241 gctgcttcct gacgctcgcg ccgaccttcc aggtctcggt gccgtcgatc ttgcccatcg
      301 gacggcgctt gaggcgttcg cctgcgagca cgacaccgcg gatttcgttg ccgctcgaga
      361 cctcgtcgta gatctcctcc atcacctcac gcgcggcggg atacgtcgcg gcgtacgctt
      421 tctcgaactc gcccttaccg gcggcgtcga gtccttcgta gacggcgaga atgccgcgct
      481 tggaaatcgt cttcgagatc gggcccgtga tcgattcggc ggcgttcaaa aaggcgtttt
      541 cacgcgtcat gccctggctc acgaagcggc gatacagcga ctcgatgatg ccgtgcaccg
      601 cgccgagcag gatgccgcgc tcgccgtaga tgtccgactt gtactcgctc tcgagcgtcg
      661 tctggaacgt gaagggcgag ccgagcgcga ccgaccagcc gagcgcgatg tccgtcgcgc
      721 ggccgtcgac gtcctgctcg acggcgaagc ttgcgttgat gccggcgccg ttcacctctt
      781 tgccctgcac gtacagccgc cgcacgctcg gtcccatgcc cttcgggcag acggcgacca
      841 cgttgatgtt cgccgggaat ttggcgccga cgttcttcat gtggccgagc aagaagccgt
      901 gggagaggcc gagcgtcgta cccggccgca tcagctcgaa cacgcgaccg aagagctcgg
      961 cttgcgcggc gtcggagatg aggagcaaga cgaggtcgct ctcgcgcacg acgtcgaact
     1021 gctcgccgag cgtgccgttc gccttagtga acccagcttg ctcggcctgc ttctcggagc
     1081 tcgagcccga gcgcagcccc accttcacgc ggatgtccgt gccggcgagc gagtcgcgca
     1141 ggttttgcgc ctgggccggc ccttgcgaac cccagccgat gacgccgatc tgcttgatgc
     1201 ccgcgaaggc tttcgaaagc agcggcaaga ggtggcggcc gcctttgacg acctgctcgc
     1261 tctgactgcc gaaatccaga cgctcgacgt tgaaaacctt ggacgtgaag gacaggggct
     1321 tcgccatggg ccgtaggcta gccgcgctcc cttgttgcgc aaggtgatat gttcgccata
     1381 ttgtgttgca cgtagtgaaa cagcaatttc acgagtgaac tccggcgcat gacctacgac
     1441 gagctccacc tcttcctcca cctctcccgc tcgctccact tcggaaagac gagccgcgag
     1501 tgccacgtga gcccgtcggc gctctcgcgc accattcagc gattggagag cgaggtgggc
     1561 cgcccgctgt tcgttcgcga tcggcgcagc gtcgagctcg cccctgcggg cgaagccctg
     1621 aaagttcacg ccgccgagac gctcgcgcgc tgggacgcgc ttcgtgcacg cttgtcggac
     1681 agcgccgaac gcttgacggg gacgctcggc atcttcgcct cggtcacggc gtgccagagc
     1741 tttttgcccg acgcgctagc gagcttccgg cgccggcacc ccgacatcca cattcgtctc
     1801 gagacgggct acgcgaccga cgcgctcggg atgctctccc gcggcacggt ggacgtcgcg
     1861 gtggcggcgt tgccggcgcg gactccgcct ggcctcgtct cgcgcacgct gctcgtcacg
     1921 ccgctcgtct tcgtcggacc ggcgagcgac tgtgaggtga gtcgcctcgt cgaagagcga
     1981 agcatcccct gggagcgcgt gccggtggtg ctgcccgcga cggggcccgg ccgcgcgagc
     2041 gccgagcgct tcttccgccg gcgccgcgtg aagccgaacg tctacggcga ggtacccggc
     2101 aacgaggcga ttctttcgct cgtgagtctc ggctgcggcg tcggcatcgt gccgaagatc
     2161 gtgctcgaca agagcccgct tcgccccgcg ctcacgaatc tcgagctcga gggggagctc
     2221 ggcgatctcg gtgtcggagt atgtgcggaa aagggtaagc tccgaaacgc cgtggtgcgc
     2281 gcgttctttg cgtcgctcga acaaggcgtg cagggctgat actcgcgttg gctgtcgcac
     2341 gtgcaggcgg gtatactctg aagcatgcgc ttgctctttc gcttgctggg cctgggcttc
     2401 gtttgtggag cgatcgcctc cgcctgcggc ggcccggatt tcacctctgc ggggagccca
     2461 cacgccggct ccgcgggcat gagcgctgca ggaggcgacg taggccttgg cggctcgtcc
     2521 accggaggtg acacgtcgct cgccgggatg gcgggcgtgc cgaacggcgg cgcacccgcg
     2581 gcgggcggaa cgagcgcggg aacggcgggc ggcggcacga cgctctgcac gggcgccaag
     2641 gactgcgatg acgccgatcc gtgtaccgtc gacacctgcg acgccgacgg tatctgcgcc
     2701 aacgcagcca agtgcacggg cgatcaaccg ctctgttgcg acggcgaatg cggccagtgt
     2761 tgcggcaagg ccgactgcga cgatcagatc gactgcaccg acgacgagtg cttcgccggc
     2821 ttctgcacca acacgcccgg cagctgcccg aacgacacgg attattgctc cgcgacgggc
     2881 tgcgtgccgc g
//
LOCUS       DATIML010000928         3496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2796127, whole genome shotgun sequence.
ACCESSION   DATIML010000928 DATIML010000000
VERSION     DATIML010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3496
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2796127"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2457)
                     /locus_tag="VLJ38_16075"
     CDS             complement(<1..2457)
                     /locus_tag="VLJ38_16075"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HSU41097.1"
                     /translation="MSVSDSSVTTFAAQSVRPPGGRHGGSPLLVTLQALRGYVPTRKS
                     AVKLRLSLFASLLTLSLSALAQSPSFHADLAARQSELARARGPEAYAALRRIWSSWDR
                     ASPAQVEETLLGATHAKNLGVPERVYAGVLAALARFRRGDVKAAHEAIKALGYVDRFL
                     IIGPFDNEGKAGLDTQFGPELELSAPIVPGRAESGKERPVRWRAVPQEFPQGFVNFAS
                     LLRPEQKVCVYATTFVQAAPGTKTPRAVSAWIGSGGAFKAFWNGREALHSNVYSGHDF
                     DRYAVSLKLEPGENALSVKICGDEAAPVLSVRLADEHGAPDPGIVVTNDVAASAPAAE
                     LAAKLTKADKGKPKSAQEKPLVAKVEHQPAKKRAEKTEKEPRPSETDVTTNVGPLKGP
                     VQAFEALTKGNPSAASLEAYARYLYETDGDDPAVHRARDLAVRASDKEPSVKRYLLAA
                     ALAEDNNQRGDWITKAEALEGKARPSRDVLLARAIQRRASPAYEEAFPIFNQLVERDP
                     DDVSAIQGRVELYAMAGMPRTALATLEGALARNPHAVNLLNLYASTLRSLGRATEATE
                     VEARYSGLRFDDSAYLGQMMGLAVVRRERSAAEHWAERLVESHPGDLWALNTAAHGYR
                     ALGESERAIATYHRALELAPEDVGTLRTLADLDGELGRTDAQLVLLHEILRIKPQDKA
                     VREYVEHVEPKKPRPDEAYAWAPERFLPLRHAPPQGQNRRTLRDLTVSTMFENGLSSQ
                     YRQVVFQPLTDAAAAAARQYGFVYETSTQVVQLRGAKVYRGDGRIDEAIEWGEGPADD
                     PSVSMYTSGRAFYVHFPRLEA"
     gene            2599..3081
                     /locus_tag="VLJ38_16080"
     CDS             2599..3081
                     /locus_tag="VLJ38_16080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HSU41098.1"
                     /translation="MVNPQMVMYEEEFNQIQTVVDRLVREANAKVVFIVDKNGQLIAA
                     SGEVDNIDTTSLASLTAGNIAATGGIAKLLRENEFATQFHEGEKANIHIQLVGNRVIL
                     VVIFDSKSSLGLVRLRVRKASDELNRIFEALLSKVQEPGGDSPFAEITDEDIDNLFND
                     "
     gene            3125..>3496
                     /locus_tag="VLJ38_16085"
     CDS             3125..>3496
                     /locus_tag="VLJ38_16085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011552025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding-motility protein MglA"
                     /protein_id="HSU41099.1"
                     /translation="MSFINYMAREINCKIVYYGPGLCGKTTNLQYIYERTNPDAKGKM
                     ISLATETERTLFFDFLPLSLGEIRGFKTRFHLYTVPGQVFYDASRKLILKGVDGVIFV
                     ADSQMERLEANQESVENLRTNL"
BASE COUNT          580 a         1129 c         1173 g          614 t
ORIGIN      
        1 cgcttcgagc cgcgggaaat gcacgtagaa cgcgcgtccc gacgtgtaca tcgagaccga
       61 cggatcgtcg gccgggcctt cgccccactc gatggcttcg tcgatgcggc cgtccccgcg
      121 gtacaccttg gcgccgcgga gctgtaccac ctgcgtcgac gtctcgtaca cgaagccgta
      181 ttgacgcgcc gccgcggcgg cggcgtccgt gagcggctga aacacgacct ggcggtactg
      241 actcgagagg ccgttctcga acatggtcga gacggtgaga tcgcgcagcg ttcgccgatt
      301 ttgaccctgc ggcggcgcgt gccgcagcgg caggaagcgc tcgggcgccc acgcgtaggc
      361 ttcgtcgggg cgcggctttt tcggctcgac gtgctcgacg tactcgcgca cggctttgtc
      421 ctgcggcttg atgcgcaaaa tctcgtgcaa gagcacgagc tgcgcgtccg tacgcccgag
      481 ctcaccgtcg agatcggcga gcgtgcgcag cgtgccgacg tcttcgggcg cgagctcgag
      541 cgcgcggtga tacgtcgcga tggcgcgctc ggactcaccg agcgcccggt acccgtgcgc
      601 cgccgtattg agcgcccaca aatcccccgg gtgcgattcg acgagccgct ccgcccagtg
      661 ctcggccgcc gagcgctcgc gccgcacgac cgcgagcccc atcatctgcc cgaggtacgc
      721 gctgtcgtcg aagcgcagcc cgctgtaacg cgcctccact tccgtcgcct ccgtcgcacg
      781 accgagcgag cgcagcgtcg aggcgtacag gttcaagaga ttgacggcgt ggggattgcg
      841 ggcgagcgcg ccttcgagcg tcgcgagcgc cgtgcgcggc atgcctgcca tggcgtagag
      901 ctccacgcgg ccctgaatcg ccgacacgtc gtcgggatcg cgctctacga gctggttgaa
      961 aatcgggaac gcctcttcgt aggcggggct cgctcggcgc tgaatggcgc gcgcgagcag
     1021 cacgtcgcgg ctcgggcgag ctttaccctc gagcgcttcg gccttcgtga tccaatcgcc
     1081 gcgctggttg ttgtcttcgg cgagtgcggc agccaaaagg tagcgtttga cgctcggttc
     1141 cttgtcgctc gcgcgcacgg cgaggtcgcg tgcgcggtgc acggccggat cgtcgccgtc
     1201 cgtctcgtac aggtaacgcg cgtacgcttc gaggctcgcc gcgctcgggt tgcccttcgt
     1261 gagcgcttcg aaagcctgca cggggccctt gagcgggccc acgttcgtgg tcacgtccgt
     1321 ctcgctcggc cggggttcct tttccgtctt ttccgcgcgc ttcttcgcag gctggtgttc
     1381 gaccttcgcg acgagcggct tttcctgcgc ggacttgggt ttgcctttgt ccgctttggt
     1441 gagcttcgcc gcaagctcgg cggccggcgc gctcgcggcg acgtcgttcg tgacgacgat
     1501 gccgggatcg ggcgcgccgt gctcgtcggc gagccgcacg gaaagcacgg gcgcggcctc
     1561 gtcgccgcaa atcttgacgc tcagggcgtt ctcgcccggc tcgagtttga gtgagacggc
     1621 gtagcgatcg aagtcgtgtc ccgagtacac gttcgagtgc aacgcttcgc ggccgttcca
     1681 aaaagctttg aaggcgccgc cgctgccgat ccacgcgctc acggcgcgag gcgttttggt
     1741 gccgggggcg gcctgcacga acgtggtcgc atacacgcac accttctgtt ccggcctgag
     1801 gagcgacgcg aaattgacga agccttgcgg aaactcctgc ggcacggcgc gccagcgtac
     1861 gggacgctct ttgccggact ctgcgcggcc cggaacgatg ggtgcgctga gctcgagctc
     1921 ggggccgaac tgggtgtcga ggccggcttt gccctcgtta tcgaaggggc cgatgatgag
     1981 gaagcgatcg acgtagccga gcgccttgat cgcttcgtgg gcggctttga cgtcgccgcg
     2041 gcgaaaacgg gcgagcgccg cgagcacacc ggcgtacacg cgttcgggca cgccgaggtt
     2101 cttggcatgc gtcgcgccga gcaaggtttc ttccacctgc gccgggctcg cacgatccca
     2161 gctcgaccaa atgcgccgga gcgctgcgta cgcttccggg ccgcgcgcgc gcgcgagctc
     2221 gctttgccgt gccgctaaat cggcgtgaaa cgacgggctc tgcgcgagcg cggagagcga
     2281 gagcgtcaga agggaggcga acagagacaa acggagcttc acggccgatt tcctggtggg
     2341 aacgtagcct cgtagcgctt gcagggtcac gagcaatggt gagcccccgt gccggccgcc
     2401 cggcggcctg acgctctgcg ccgcgaacgt cgtgacggag ctgtccgaaa cgctcacgct
     2461 tgcctacctt ttcaagggtg aaggacgctc caggccttgt ccgcacgtgg ggggcaagtt
     2521 agaagagttt gctcccccga ggagcaagca gacgcgcgag gatctagttt tgaggtcggc
     2581 cgggctgctg gaggcgtgat ggtcaatccc cagatggtga tgtacgaaga ggagttcaac
     2641 cagatccaga cggtcgtgga ccgcctggtt cgggaagcga acgccaaagt cgtcttcatc
     2701 gtcgacaaga acggtcaact catcgcggcg agcggcgagg tcgacaacat cgacaccacg
     2761 tccctcgcgt cgctcacggc gggcaacatc gcggccacgg gcgggattgc caagcttttg
     2821 cgcgagaacg agttcgcgac gcagttccac gaaggcgaaa aagcgaacat ccacatccag
     2881 ctcgtgggta accgcgtcat cctggtcgtg atcttcgact ccaaatcgag cctcggcttg
     2941 gttcggctcc gcgtgcgtaa ggcgagcgac gagctgaacc ggatcttcga ggcgcttttg
     3001 agcaaagtgc aggagccggg cggcgactca cccttcgccg agatcaccga cgaggacatc
     3061 gacaacctgt tcaacgactg agcatgcaaa ggtctgcgaa gctgaacgtc gagggtgccg
     3121 ggccatgagc ttcatcaact acatggctcg ggagatcaac tgcaagatcg tctattacgg
     3181 tcccggactc tgcggcaaga cgacgaatct tcagtacatc tacgagcgca cgaatcccga
     3241 cgcgaagggc aagatgatca gcctcgcgac ggagaccgag cgcacgctgt tcttcgattt
     3301 cctgccgctc tcgctcggtg agatccgcgg cttcaagacg cgcttccacc tctacacggt
     3361 gccgggccag gtcttctacg acgcgagccg caagctcatc ctcaagggtg tggacggcgt
     3421 catcttcgtc gccgactcgc agatggaacg cctcgaggcg aaccaggaga gcgtcgaaaa
     3481 cctgcgcacg aacctg
//
LOCUS       DATIML010000929         2787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5686730, whole genome shotgun sequence.
ACCESSION   DATIML010000929 DATIML010000000
VERSION     DATIML010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5686730"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VLJ38_16090"
     CDS             <1..495
                     /locus_tag="VLJ38_16090"
                     /inference="COORDINATES: protein motif:HMM:NF024920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterol carrier protein domain-containing
                     protein"
                     /protein_id="HSU41100.1"
                     /translation="HDFLTTTAAALRRFTAFFAEHRSTIKWLSLRSSALDPLVFTAPE
                     RVFRIELSETWMLRVLDVEGALVARGYPPIDAAIDFELSDRTLPENSGRYRLAVTGGR
                     AEVTPGGRGDVALDERALAALYTGFLSPVALAAAGRIEGEPTALARLGALFAGPPPVM
                     PDYF"
     gene            497..2644
                     /locus_tag="VLJ38_16095"
     CDS             497..2644
                     /locus_tag="VLJ38_16095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41101.1"
                     /translation="MRRCALVLALSGVLAVFAACGGEAARQQRAQRETAPLPSGVTRE
                     DAVIGSELAALRREEGELRARTDFAALAPSNRAFGANPYALAVVRNTPYFVGILRGDS
                     RVVLLDEKLRTVSSRATVASPSALATAPDGSVFVAGPLGASIDRFVVRRGELEPSGAL
                     ALPNGVVVRGLAADEKSLVVLDFVGDRLLSLPLATALTVPAGGAVPPIRTSPHVTSTC
                     QGPFRLALSARHLAVACLFDHAIAVFARDASGAPTRQIARITHDGPLWSVALLERGDE
                     LFIGTGGVEDRPLERRDRVFGYIDSFAYLYRLKPDGSLARQQAVNTSELGVVLPKAVT
                     LRERDGAPELLALGYATAPLVALTPSSTRIAMTALPGCNELVTNGERLLCPNPLFDAW
                     VELTPSGPLLYPARAAAPSDPDAEGRLGEALFFTTLMAPDARSDGRLSRFTCETCHFE
                     GATDGRVHDSGRHAFDSPADVRVSTRQLFGLFNDAPLFSRAHDRDLTSVCNNEFTVVN
                     RGNPVDPWFSLDTARFPWLHALGERRARLSPSELRRALFRFLARFTHEENPFVAAHEP
                     SGRFTPRERRGAELFRERCERCHAARLVANDPVTLVPFERWETLVFSPATPIVWARGD
                     YEKTGVLPYVDREGTRIPSLRRLYSKRPYFTNGSARSLADVLERARFSADGFVHAEAS
                     PLGVFAAGHAEASPSVALDEAARLALLDFLRLL"
BASE COUNT          371 a         1060 c          894 g          462 t
ORIGIN      
        1 cacgactttc taacgacgac cgccgccgcg ctccggcgct tcacggcttt ctttgccgag
       61 caccgcagca ccatcaagtg gctgagcctg cgctcgtccg cgctcgatcc gctcgtgttc
      121 acggcgccgg agcgcgtctt ccgcatcgag ctctccgaga cctggatgct gcgcgtcctc
      181 gacgtcgaag gcgcgctcgt ggcgcgcggc tacccgccga tcgacgcggc catcgatttc
      241 gagctcagcg accgcacgct gcccgaaaac tccggccgct atcggctcgc agtgacgggc
      301 ggacgcgcag aggtcacgcc gggcgggcgc ggcgacgtgg ctctcgacga acgcgcgctc
      361 gccgcgctct acacgggctt cctctcgccg gtcgcgctcg cggccgcggg acgcatcgag
      421 ggcgaaccca cggcgctcgc gcggctcggc gcgctctttg ccggaccgcc gcccgtcatg
      481 cccgactact tctgacatgc gccgctgcgc gctggtcctc gcgctctccg gcgtgctcgc
      541 ggtcttcgcg gcgtgcggtg gcgaagcggc gcggcagcaa agggcgcagc gcgaaacggc
      601 gccgttaccc tcgggagtga ctcgtgagga cgcagtgata ggtagcgagc tcgccgcgct
      661 ccggcgcgag gagggcgagc tccgcgcacg caccgatttc gctgcgctcg cgccgtcgaa
      721 ccgtgcgttc ggcgcgaacc cgtacgcgct cgccgtcgtc cggaacacgc cgtatttcgt
      781 cggtatcttg cgcggcgaca gccgcgtcgt cctgctcgac gaaaagctcc ggacggtgag
      841 ctcacgcgcc accgtggcgt caccgagcgc gctcgcgacc gcgccggacg gaagcgtttt
      901 cgtcgcgggt ccgctcggcg cgagcatcga ccgcttcgtc gtcaggcgtg gcgagctcga
      961 gccgagcggc gcgctcgcgc tgccgaatgg tgtcgtggtg cgcggcctcg ccgccgatga
     1021 aaagtccttg gtcgttcttg attttgtggg cgaccgcttg ctctcgctgc ctcttgcgac
     1081 ggcgctcacc gttccagccg gcggcgccgt gccgcccatc cgcacgtcgc ctcacgtcac
     1141 gtccacctgc caaggcccct ttcgcctggc gctctccgcg cgtcacctcg ccgtcgcttg
     1201 tcttttcgac cacgccatcg ccgtcttcgc tcgcgacgcg agcggcgcgc ccacgcgaca
     1261 aatcgcgcgc atcactcacg acggcccact ctggtccgtc gcgctgctcg agcgcggcga
     1321 cgagctcttc atcggcacgg gcggcgtcga agatcgcccg ctcgaacgcc gcgaccgcgt
     1381 ctttggctac atcgactcgt tcgcgtatct ttaccggcta aagcccgacg gttcgctcgc
     1441 gcgtcaacag gccgtgaaca cgagcgagct cggcgtcgtc ctacccaaag ccgtcaccct
     1501 acgcgaacgc gacggcgcgc ccgagctcct cgcgctcggc tacgccacgg ctccgctcgt
     1561 cgcgctcacg ccgagcagca cgcgcattgc gatgaccgct ctgcccggct gcaacgagct
     1621 cgtcacgaac ggcgaacgcc tgctgtgccc gaacccgctc ttcgacgcgt gggtcgagct
     1681 cacgccgagc ggccctctgc tctaccctgc gcgcgcggcc gcgccgagcg atccggacgc
     1741 cgaaggccgc ctcggcgaag ccctcttttt caccacgctg atggcacccg acgcgcgcag
     1801 cgacggacgc ctcagccgct tcacctgcga aacgtgccac ttcgagggcg cgactgacgg
     1861 gcgcgtgcac gatagcggcc ggcacgcgtt cgattcaccc gccgacgtgc gtgtgagcac
     1921 gcggcagctc ttcgggctct tcaacgacgc gccgctcttc tcgcgcgccc acgatcgcga
     1981 tctcacgagc gtgtgcaaca acgagttcac ggtggtcaat cgcggtaacc ccgtggatcc
     2041 gtggttttcg ctcgatacgg cgcggtttcc ctggcttcac gcactcggtg aacggcgcgc
     2101 gcggctttcg cccagcgagc tccggcgcgc gctcttccga tttctcgcgc gcttcacgca
     2161 cgaagaaaat ccgttcgtcg cggcgcacga gccgtccggt cgcttcacgc cgcgcgagcg
     2221 ccgaggcgcc gagctctttc gcgaacgttg cgagcgctgc cacgccgcgc ggctcgtcgc
     2281 gaacgacccg gtgacgctcg tcccgttcga gcgctgggag acgctcgtct tctcgcccgc
     2341 gacgccgatc gtctgggcgc gcggcgatta cgaaaagacg ggcgtgttgc cgtacgtcga
     2401 tcgcgaagga acgcgcatcc cgtcgctccg ccggctgtac tcgaaacgcc cgtacttcac
     2461 caacggcagc gcccgctcgc tcgccgacgt gctcgaacgc gcacgcttct cggcagacgg
     2521 tttcgttcac gccgaagcgt cgccgctcgg cgtgttcgcc gccggacacg ccgaagcgtc
     2581 gccgtccgtc gcgctcgacg aagccgcgcg gctcgcgtta ctcgacttcc tgcgcctgct
     2641 ctagcgcccg cgcttcgctg cgccgtgcgt caagccgggg cgtgcgacgg ccgctgcccg
     2701 acgatcgggt ccaccgctga cagcaccgcc acctggatct cgagccgtcg cgtcgtgttg
     2761 atgggcgagc cgtcgaactc gacgata
//
LOCUS       DATIML010000930         1958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4822837, whole genome shotgun sequence.
ACCESSION   DATIML010000930 DATIML010000000
VERSION     DATIML010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4822837"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..879)
                     /locus_tag="VLJ38_16100"
     CDS             complement(<1..879)
                     /locus_tag="VLJ38_16100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41102.1"
                     /translation="MKLVVATHGHCFDGLASAVLFTQLARALHDGEPLELSYRACGYG
                     AGQARADDAMLTGDANAILDYRYHPCEKLSWYFDHHRTAFASNEDRAHFEARRSNGHF
                     FYDAEATSCTKLIAQLAREHFDVEAPALAELVAWADRIDSARFESAEQAVDRSDAVMQ
                     FVSVVEHYGDDSFLTRFVPELLTRPLRDVAALPEVLARYRPLGKKHDRFVDSVKRQSL
                     RQGRVVFVDLTAEVLDSVGKFVTYALFPDSVYSVIIGLMKHGPKISVGYNPWSGRPRD
                     ADISSICARYGGGGHPV"
     gene            966..1910
                     /locus_tag="VLJ38_16105"
     CDS             966..1910
                     /locus_tag="VLJ38_16105"
                     /inference="COORDINATES: protein motif:HMM:NF014533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HSU41103.1"
                     /translation="MVDACSRVLTGPLLPVRLLDLPRPPRRIHVLGELPRGPGVAIVG
                     SRHPTKEAHCFAFRLARDLARAGITVLSGGAAGIDGAAHLGALRGGGATVVVAPAGFE
                     KPFPAFHRRLFERVLERGGAYLSLRRPAEPAFGFFARNACLVALAHVLVVVEAKYRSG
                     ARNAASWARRLGRPLLIVPSAPWIPAGRGCLLELRLGGKLCTGPEDVLDALEQSLVLP
                     PRPKQRTSDEAEQTELPFTAPTPATALDAQARLLLEAVRAGARHLDAVCERSGLSAAA
                     AQRLILTLTLEGVLAADPAGGLGVAPAGKSVSRRKPLK"
BASE COUNT          302 a          639 c          678 g          339 t
ORIGIN      
        1 gacggggtga ccgccgccgc cgtagcgagc gcaaatcgag ctgatgtcgg cgtcgcgcgg
       61 acgcccggac cagggattat aaccgaccga aattttcggt ccgtgcttca tgaggccgat
      121 gatgacggaa tagacggagt ccgggaacag cgcgtaggtc acgaactttc cgacgctgtc
      181 cagcacctcc gccgtcaaat cgacgaagac cacgcgcccc tggcggaggc tctggcgctt
      241 gacgctatcg acgaagcgat cgtgcttttt gccgagcggc cgataacgcg cgagcacctc
      301 gggcagcgcc gccacgtcac gcagcggacg cgtgagcagc tccggcacga agcgggtgag
      361 gaaggagtcg tcgccgtagt gttcgacgac gctgacgaac tgcatcacgg cgtccgagcg
      421 atcgacggct tgttccgcgc tctcgaaacg cgccgaatcg atgcggtccg cccaggcgac
      481 gagctcggcg agcgccggag cttccacgtc gaagtgctcg cgggcaagct gcgcgatgag
      541 cttggtgcac gaggtcgcct cggcgtcgta gaagaagtgt ccgttgctcc ggcgggcctc
      601 gaagtgcgcg cggtcctcgt tggaggcaaa tgcggtgcgg tgatgatcga agtaccagct
      661 gagcttttcg cagggatggt agcgataatc gaggatcgcg ttcgcatcgc ccgtcagcat
      721 ggcgtcgtcg gcacgcgctt gcccggcgcc gtagccgcac gctcggtagc tgagctcgag
      781 cggctcgccg tcgtggagcg cccgcgcgag ctgggtgaac aggacggcgc tcgcgaggcc
      841 atcgaagcaa tggccgtgcg tggcgacgac gagcttcatg atgtcgggaa atgtagcaca
      901 cgaccttcgc gccgcggaac tttcgggcca gcaacccggc aggcgaggtg cccgaccagc
      961 acagcatggt cgatgcctgc tcgcgcgtgc tgacggggcc gctccttccc gttcgcctcc
     1021 tggatttgcc ccggccaccg cgacgtatcc acgtgctcgg cgaactaccg cgggggcccg
     1081 gcgtggccat cgtcggatcg cggcacccga ccaaggaggc gcactgtttc gcctttcgac
     1141 tcgctcgcga tcttgctcgt gctggaatca ccgtgctgtc cggtggcgcg gctgggatcg
     1201 acggtgcggc ccaccttggc gcgctgcgcg gcgggggtgc cacggtagtc gtggcgcctg
     1261 ctggcttcga gaagccgttc ccggcgtttc accgccggct gttcgagcgc gttctcgagc
     1321 gcggtggcgc ctatctctcg ctgaggcgtc ccgctgagcc tgccttcgga ttttttgctc
     1381 gtaatgcgtg cctggtggcg ctcgcacacg tcctcgtcgt cgtcgaagcg aagtatcgca
     1441 gcggcgctcg aaacgcggcg agctgggccc ggcgtctcgg ccggccgctc ctcatcgtac
     1501 cgagcgcgcc ttggataccg gcaggtcgcg gttgcctgct cgagctgcgg ctgggcggta
     1561 aattgtgtac cggtcccgaa gacgtgctcg acgcgctgga acaaagcttg gttctgccgc
     1621 cccgccccaa acagcgaaca tcggacgagg cggagcagac tgagctcccg ttcactgctc
     1681 cgacaccggc taccgcgctg gacgctcaag cacggctgct cctggaagcg gtacgcgcgg
     1741 gggctcgtca cctcgacgcc gtctgcgagc gttcggggct ctcggcggcg gccgcccagc
     1801 gcctcatcct gaccctcacg ttggaggggg tcttggcagc cgaccccgcg ggcgggctgg
     1861 gcgtggcccc cgccggcaag tcggtttcac gtcgtaagcc actgaaatga atcgcaaata
     1921 gggaagcctc ggctggggga ggccttgcgc ttctctta
//
LOCUS       DATIML010000931         4547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2507554, whole genome shotgun sequence.
ACCESSION   DATIML010000931 DATIML010000000
VERSION     DATIML010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4547
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2507554"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1280
                     /locus_tag="VLJ38_16110"
     CDS             <1..1280
                     /locus_tag="VLJ38_16110"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSU41104.1"
                     /translation="VLVPPLAMLFGTRLFGRPGPASTHETRGLARLVLGHPRPVLGVA
                     LALFVVATFGIFKRNGTWLETNFSRLRRADSFEHGERYWGPRMDATLHTYLTPAVIMT
                     DSSAAASRAASAVRELARTGRAGDLIATVRTADDVLPPYREQSLEEARKLARSVTPAM
                     LDALPAEDRARVERVLSPEALAPLEAAEVPATLLAGLRDTQGHVDRNVLVFPKVGNGT
                     WDATKMAAFAADLREVARSTGDHALVVGGLLLSSDIISAMRRDGPIATAAAMVAVLIV
                     ALLAFRHVGLSLAAIGSLVVGITLMLGFAAWTGQRLNFSNLIALPITFGVAADYSINV
                     LKRYQAHGELEQAVGKTGGAVALCSATTVIGFASLIVAQNRALRSFGELAISGELACL
                     STAVLALPAYLAWRASSHGTFAKPDVQRQESGA"
     gene            1277..2641
                     /locus_tag="VLJ38_16115"
     CDS             1277..2641
                     /locus_tag="VLJ38_16115"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU41105.1"
                     /translation="MTRARTWSLVLAALCFALAWSAQAEPRRLSLERAVSLARQNPLA
                     RAALERARAASAQVDEAKGARFPRATLTSFIGPSPEIHCVAGTNCSQTEPHEVRLRFE
                     GVYGGVTAELLQPLYTFGKVQSAINAAGGNLEMNQVLATGAADDMGLEAARAYLGIDL
                     ARELGEMLDDGREKLDAATKTLAERLERGESDVTVQDRLRLETFMAEILARQSEARES
                     EATARFGLQALVGDPDADTLGEPLEPLGLNLEQAKTYVDRAAQGRTEVRAAVSGVTAL
                     EALRNMERARLLPDLGIIAGGSWTRAGGVDDPPSAFANDPFNHTTAYAALVLRWTIEP
                     AAQIARLARANAELERGRDLLQAARRAGDFAVLQAYTRATEAHHRLDAATAGEKSARG
                     WVASVMQADAIGTVTAREMADAYLAYFTIHSRLLQSTYEFDLALLTLRRAIGESLILP
                     PKPH"
     gene            2723..3334
                     /locus_tag="VLJ38_16120"
     CDS             2723..3334
                     /locus_tag="VLJ38_16120"
                     /inference="COORDINATES: protein motif:HMM:NF017319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU41106.1"
                     /translation="MRKITQFLTLVFVFVLAAVAQAADGPATATVRQANDTLHALLRR
                     KVTPGSPEEKQQASEVTAKLQNFLDVDELGRRAMRDQWSKLKPAQQAEFTKLLREIVE
                     GHYLRALRSELDYDVAYVGEKPHDDEASVATELRVTRKGKKQVISVDYTLRRDKGTWR
                     VFDIVTDGVGLVENYRAQFNQVIAKEGVEGLLTRMRKKSLATS"
     gene            3525..>4547
                     /locus_tag="VLJ38_16125"
     CDS             3525..>4547
                     /locus_tag="VLJ38_16125"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU41107.1"
                     /translation="MRIAQVAPLYESVPPHLYGGTERIVSYITEELVALGHDVTLYAA
                     GDSQTKARLVSVCPESLRLAKGCIDTLSHHQVMLEMISRDYPQYDIIHFHIDYLHFMT
                     SRLLGLRNITTLHGRLDIPDLKPLYTAFPDMPVVSISDSQRAPLPEANWIGTVKHGLP
                     VNLLPFSPKPQDYFAFVGRISPEKRVDRAIEIATTLGVKLRIAAKVDNADRQYFEKEI
                     EPLLENPLVEYIGEIGEADKPEFVGNARALLFPIDWPEPFGLVMIEAMACGTPVIAFN
                     YGSVPEVIDPGLTGFIVNDIDEAVAAVGKIHTLDRGRVRATFDRRFTARRMAEDYVDL
                     YETLAEP"
BASE COUNT          747 a         1590 c         1444 g          766 t
ORIGIN      
        1 acgtcctggt tccgcccctc gccatgctct tcggcacgcg cctgttcggc cgcccggggc
       61 ccgcctccac gcacgaaacg cgcggtctcg ctcgcctcgt gctcggtcat ccgcggcccg
      121 tgctcggcgt cgcgctcgcg ctcttcgtcg tcgcgacctt cggtatcttc aagcgcaacg
      181 gcacctggct cgagacgaat ttttcgcggc tccggcgcgc cgactcgttc gaacacggcg
      241 agcgctattg gggcccgcgc atggacgcga cgctccacac gtacctgacg cccgccgtga
      301 tcatgacgga ctcgagcgcc gccgcttccc gcgccgcttc ggccgttcgc gagctcgcgc
      361 gcacgggccg cgccggcgat ctgatcgcca cggtgcgcac cgccgacgac gtgctgccgc
      421 cgtaccgcga gcaatcgctc gaggaggcgc gaaaactggc gcgctcggtg acgcccgcga
      481 tgctggacgc gctccccgcc gaggatcgcg cccgcgtcga gcgcgtgctc tcgcccgagg
      541 cgctcgctcc gctcgaagcg gcggaggtgc cggcgacgtt gctcgccggg ctgcgcgaca
      601 cccaaggcca cgtcgatcgc aacgtgctcg tattccccaa ggtcggtaac ggcacctggg
      661 acgcgacgaa aatggctgca ttcgcggcgg acctgcgcga ggtcgcgcgc tcgacgggcg
      721 atcacgcgct cgtggttggc ggcctgttgc tctcgagcga tatcatctcg gccatgcgtc
      781 gcgacggtcc gatcgctacg gcggccgcca tggtggccgt gctcattgtg gcactgctcg
      841 ccttccgtca cgtcgggctc tcgctcgccg ctatcggcag tctggtggtc ggtatcacgc
      901 tgatgctcgg cttcgcggcg tggacgggcc agcgcttgaa tttctcgaac ctgatcgcgc
      961 tgcccatcac cttcggcgtc gccgccgact actcgatcaa cgtgctcaag cgctatcagg
     1021 cgcacggcga gctcgagcag gcggtcggca agacgggtgg cgccgtggcg ctctgttccg
     1081 cgaccaccgt gatcggcttc gcctcgctga tcgtggcgca aaaccgggcg ctacgctcgt
     1141 tcggcgagct tgccatcagc ggggagctcg cgtgcctcag cacggcggtg ctcgcgctgc
     1201 cggcgtacct ggcttggcgc gcgagcagtc acgggacgtt cgccaaaccg gacgtgcagc
     1261 gtcaggaatc gggcgcatga cgcgagcgag gacgtggtcg ctcgtcctcg ccgcgctctg
     1321 cttcgcgctg gcgtggagcg cgcaagcgga gccgcggcgt ttgtcgctgg agcgcgccgt
     1381 ctcgctcgct cgacagaatc cgctggcgcg tgcggcgctc gagcgcgcgc gcgccgcctc
     1441 cgctcaggtc gacgaggcca agggtgcgcg ctttccgcgc gccacgctga cgtcgttcat
     1501 cggaccgagc ccagaaattc attgtgtcgc cggcacgaac tgctcccaaa cggaaccgca
     1561 cgaagtgagg ctccgcttcg aaggtgtcta cggcggcgtc accgcggagc tgctgcagcc
     1621 gctctacacc ttcggtaagg tgcagtcggc catcaacgcg gcgggcggca acctcgagat
     1681 gaaccaggtg ctggcgacgg gcgccgccga cgacatgggt ctcgaagcgg cgcgcgcgta
     1741 cctcggtatc gacctcgcgc gcgagctcgg cgagatgctc gacgacggac gcgagaagct
     1801 cgacgccgcg accaagacgc tcgccgagcg cctcgagcgc ggcgagtccg acgtgaccgt
     1861 gcaggatcgc ctgcggctcg agacgttcat ggcggaaatc ctcgcgcgcc agagcgaagc
     1921 gcgcgagagc gaggcgacgg cgcgcttcgg cttgcaggcg ctcgtcggcg accccgacgc
     1981 cgatacgctg ggcgagccgc tcgagccgct cggcttgaac ctcgagcagg ccaagacgta
     2041 cgtggaccgc gccgcgcagg gccgaacgga agtgcgcgcc gccgtgagcg gcgtcacggc
     2101 gctcgaagcg ctgcgaaaca tggagcgcgc gcgcctgctc ccggatctcg gcatcatcgc
     2161 cggcggcagc tggacgcggg ccggcggcgt cgacgatccg ccgagcgcgt tcgccaacga
     2221 tccgttcaac cacacgaccg cctacgccgc cctcgtcctg cgctggacca tcgagcccgc
     2281 cgcgcaaatc gcccggctcg cgcgcgccaa cgccgagctc gaacgtggtc gcgatttgct
     2341 acaagctgca cgccgtgccg gcgatttcgc cgtgctccag gcgtacactc gcgccacgga
     2401 ggcccaccat cggctcgacg ctgcgacggc cggggagaaa agcgcgcgtg gctgggtagc
     2461 atcggtgatg caggcggacg ccatcggtac cgtcaccgcc cgcgaaatgg ccgacgccta
     2521 cctcgcctat ttcacgattc acagtaggct gctgcagagc acgtacgagt tcgacctagc
     2581 cctgctcacg ctgcgccgag cgataggcga gtcgctgatt ctccccccta aaccgcacta
     2641 gcttctctca cctgccttgt tggctgggcc tctggcccag tgctccgtag ctttccgttc
     2701 tcgaacgctg tcgaggtccg ccgtgcgcaa aatcactcaa tttctcacgc tggttttcgt
     2761 tttcgtcctc gccgccgtcg cgcaagctgc tgacggtccc gccacggcta ccgttcggca
     2821 ggccaacgac acgctgcacg cgctcttgcg tcgtaaagtg acgcccggct cgcccgaaga
     2881 aaagcagcaa gcgagcgaag tcacggccaa gctccagaac tttctcgatg tggacgagct
     2941 cggccgccgc gccatgcgcg atcaatggag caagctcaag cccgcgcagc aggccgagtt
     3001 caccaagctc ttacgggaaa tcgtcgaagg ccactacctt cgcgcgctgc gctccgagct
     3061 cgactacgac gtagcttacg tcggtgaaaa gccgcacgac gacgaagcct ccgtcgcgac
     3121 cgagctccgc gtgactcgca aaggtaagaa gcaggtgatc agcgtcgatt acacgctgcg
     3181 gcgcgacaag ggcacctggc gcgtcttcga catcgtcacc gacggcgtag gcctcgtcga
     3241 aaactaccgc gcgcagttca accaggtcat cgccaaggaa ggcgtcgaag ggctgctcac
     3301 acgcatgcgg aagaagagcc tcgcaacctc gtaaagattc ttgccagcgg ccgtgctgcc
     3361 cgagtcgggc aattagcggc tctgtttcga cgcgcccctt ggcggccggc agtgcgtcct
     3421 tgccacaaga gtgatcggtt tgcacgttat ctcgccgcct gcgcagcgct gaagggcacc
     3481 tagttcgccg gaggccgtgg cacctgtctt gcttgacacg gcgcatgcga attgcccaag
     3541 ttgcgccgct ctacgagagt gtcccgcctc acctgtacgg cggaacggag cggatcgttt
     3601 cgtacattac agaagagctc gtcgcgctcg gtcacgacgt caccttgtat gccgccgggg
     3661 actcgcagac caaagcgagg ctcgtgagcg tgtgcccgga atcgctgcgg ctcgcgaagg
     3721 gctgcatcga cacgctttcg caccatcagg tgatgctcga gatgatttcg cgcgattacc
     3781 cgcagtacga catcatccat tttcacatcg attacctgca tttcatgacg tcgcgcctgc
     3841 tcggcttgcg caacatcacg acgctacacg gccgcctcga catccccgat ctcaagccgc
     3901 tctacacggc cttccccgac atgcccgtgg tctcgatttc agattcgcaa cgcgcgccgc
     3961 tgccggaagc gaattggatc ggtaccgtta agcacggcct gccggtgaat ctcttgccgt
     4021 tcagccccaa accgcaggac tactttgcgt tcgtgggtcg aatctcgccc gaaaagcgcg
     4081 tggatcgcgc gatcgagatc gcgaccaccc tgggcgtgaa gctccgcatt gcagccaaag
     4141 tggacaacgc cgatcgtcag tacttcgaaa aggagatcga gccgctgctc gaaaacccgc
     4201 tcgtcgagta catcggcgaa atcggcgaag cggacaaacc cgagttcgtc ggcaatgcgc
     4261 gcgcattgct gtttcccatc gattggccgg agccgttcgg gctcgtgatg atcgaggcca
     4321 tggcctgcgg cacgccggtc atcgccttca actatggctc ggtgccggaa gtgatcgacc
     4381 ccggcctgac cggcttcatc gtcaacgata tcgacgaggc cgttgccgcc gtcggcaaga
     4441 tccacacgct cgaccggggc cgcgtccgcg ccaccttcga tcgccgcttc accgcgcgcc
     4501 gcatggccga ggattatgtg gacctctacg agacactcgc cgagccg
//
LOCUS       DATIML010000932         1646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2218360, whole genome shotgun sequence.
ACCESSION   DATIML010000932 DATIML010000000
VERSION     DATIML010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2218360"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VLJ38_16130"
     CDS             complement(<1..375)
                     /locus_tag="VLJ38_16130"
                     /inference="COORDINATES: protein motif:HMM:NF018765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1360 domain-containing protein"
                     /protein_id="HSU41108.1"
                     /translation="MSLSLEISHPQSDRNPKDNAIEAYAAGAPEELPIEGYATMMLAF
                     LGTFAALAGIARLKGRLPSHIAPSDIVLLGVATHELSRVLTRARVTIPLRVPFTHYAG
                     SDGAGQVKEEPRGHGLRRAVGSL"
     gene            624..>1646
                     /locus_tag="VLJ38_16135"
     CDS             624..>1646
                     /locus_tag="VLJ38_16135"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU41109.1"
                     /translation="MFLEGYSIDELIARSERNSVRRARRLRDGARVIIKTSTTEYPTA
                     RDVRRLELEHHLLTKLSCPGVIEVLGLERRAGRLALVLEDFGGERLPITPGRGLPLER
                     FFPLARGIVRALGEVHARGVIHKDVNPRNVLMNPVTGVVKLIDFSLSSELSREHAAAL
                     PCKDLEGTLAYLAPEQTGRMNRDVDQRSDYYALGVTFFELLTGSLPFTAPDVLGYVHC
                     HLSKQPPSAHEKNPEVPEALARIVAKLMAKNPDERYESAGGLLHDLERCENAWKTSGE
                     VPIFELGAEDVSERFRVSQALVGREAEVSALLAAFERASGGAAELLLVSGYSGVGKSS
                     LVRELYR"
BASE COUNT          268 a          566 c          540 g          272 t
ORIGIN      
        1 gaggctgccg accgcgcgcc gcagcccatg gccgcgcggc tcctctttca cttggccggc
       61 gccgtcgctg ccggcgtagt gcgtgaacgg cacgcgcagc ggaatcgtca cgcgcgcgcg
      121 cgtcagcacg cgcgacagct cgtgcgtcgc cacgccgagc agcacgatgt cggacggcgc
      181 gatgtgtgac ggtaagcgac ctttcaggcg cgcgatgccg gcgagcgccg cgaacgtgcc
      241 taaaaacgcc agcatcatcg tcgcgtagcc ttcaatcggt agctcttcgg gagcaccggc
      301 ggcgtacgcc tcgatcgcgt tgtccttggg attccggtct gactgtgggt gagagatttc
      361 gagagacaag ctcaccgtga gaagcagaca acgtgccacc tcgtgcgacc tgcctcgttc
      421 gctgccagcc ggattttgcg ctttttgcgc gccgagtcag tgaggcggac ggctcggatg
      481 cacgagtgcg gcgatgtgcg cgacggcgtt ccacgctcgc actcgatttg ctcgctcgaa
      541 tcgaagctca tgcgagaacg ggaccgaaca ggctattgtc gaagcagggt ggaccctcac
      601 gggtctaagg agaacgcgca gccatgttcc tcgaagggta ctcaatcgac gagctcatcg
      661 cgcgctcgga gcgcaactcg gtgcgccgcg cgcgacgttt gcgggacggg gctcgcgtca
      721 tcatcaagac ctcgaccacc gagtacccca ccgcgcgcga cgtccgccgg ctcgagctcg
      781 agcatcacct gctcaccaag ctcagctgtc ccggcgtgat cgaggtgctc ggactcgaac
      841 gccgcgcggg ccggctcgcg ctcgtgctcg aggatttcgg cggtgaacgg ctcccgatca
      901 cgcccgggcg cggcctgccg ctcgaacgct tcttcccgct cgcgcgcggc atcgtccgcg
      961 ccctcggcga ggttcacgcc cgcggcgtga ttcacaaaga cgtgaatccg cgcaacgtgc
     1021 tcatgaatcc cgtcacgggc gtcgtcaagc tcatcgattt ctcgctgtcc tccgagctct
     1081 cgcgcgaaca cgccgccgcg ctcccgtgca aggacctcga gggcacgctg gcttatctcg
     1141 cgccggagca aaccggacgc atgaaccgcg acgtcgatca gcgcagcgac tactacgcgc
     1201 tcggcgtcac cttcttcgag ctcctcacgg gctcgctccc gttcaccgcg cccgacgtgc
     1261 tcggctacgt gcactgccac ctctcgaagc agccgccgag cgcgcacgaa aagaacccgg
     1321 aggtgcccga ggcgctcgcg cgcatcgtcg cgaagctgat ggcgaaaaat cccgacgagc
     1381 gttacgagag cgccggcggg ctgcttcacg acctcgagcg ctgcgaaaac gcctggaaaa
     1441 cgagcggcga agtgccgata ttcgagctcg gcgcagagga tgtctcggag cgctttcgcg
     1501 tgtcgcaagc gctcgtcggg cgcgaggcgg aggtgtcggc gctgctcgcg gccttcgagc
     1561 gagcgagcgg cggcgcggcg gagctcctgc tcgtctccgg ctattccggc gtcggcaagt
     1621 cgtcgctcgt gcgcgagctt tatcgc
//
LOCUS       DATIML010000933         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4240682, whole genome shotgun sequence.
ACCESSION   DATIML010000933 DATIML010000000
VERSION     DATIML010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4240682"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VLJ38_16140"
     CDS             complement(<1..359)
                     /locus_tag="VLJ38_16140"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HSU41110.1"
                     /translation="MTQLVPTASGTLAATPLGHLLIHALDRRLTGSLVFEETDHRKHA
                     VYLRDGAPASARTAEPVALLGALAVEHGVLGAERVEEAVEAASQAGKPLGEVLRAAGV
                     LDEAALDALLREQVERRL"
     gene            516..>1518
                     /locus_tag="VLJ38_16145"
     CDS             516..>1518
                     /locus_tag="VLJ38_16145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU41111.1"
                     /translation="MARGTVLVVDDEPSILGTLKKALSLEGYSTDVAGGIAVAEERLL
                     KKDYDIVLLDLGLPDGDGLDWLAKLRERGESAEVIMMSGHGTIDAAVRATKLGALDFL
                     EKPLSTDRLLVMLDNAFRLRRAQEETRELKAQAGYFDELVGTSSAMLGLQERVARAAR
                     SSASVLVTGERGTGKELVARAIHRASPRAKAALERLNCAAVPAELIESELFGHEAGAF
                     TGATKQRAGKFERAHGGTLFLDEVGDMPLAMQSKLLRVLQERELERVGGSETFKIDVR
                     VVAATNRDLRAACEKGDFRADLYDRLNVVPVEIPPLRARRDDIPLLARQFLELARTSN
                     "
BASE COUNT          261 a          554 c          497 g          206 t
ORIGIN      
        1 aggcgccgct cgacctgctc gcgcaggagt gcgtcgagcg ccgcctcgtc gagcacgccc
       61 gccgcacgca gcacctcacc gagcggctta ccggcttggg acgctgcctc gaccgcttcc
      121 tcgacgcgct cggcaccgag cacgccgtgc tcgacggcga gcgcaccgag cagcgcgacc
      181 ggttcggccg tgcgcgccga cgcaggtgcc ccatcgcgca ggtagaccgc atgcttgcga
      241 tgatcggtct cctcgaacac caggctgccc gtcaggcgtc gatcgagcgc gtgaatcaag
      301 aggtgcccga gcggcgttgc cgcgagcgtc ccgctggccg tcggcaccag ctgagtcatc
      361 ggaaaacccg tccgtccaca gagcgcctcg ccaaacccga accgcgggaa gcgtaccacc
      421 gtccccgacc gccatcgcag ccgcatttag gccggcccga ggcagcgccg cggccggtca
      481 tggccgctcg gagtcggatt cgctagcctg cccggatggc gcgcggcacc gtcctcgtcg
      541 tcgacgacga gccgtcgatc ctcgggacac tcaagaaagc cctaagcctc gagggttact
      601 ccacggacgt ggcgggcgga attgccgtcg ccgaggagcg gctcctcaaa aaagactacg
      661 acatcgtcct gctcgatctg ggactgcccg acggcgacgg actcgactgg ctcgccaagc
      721 tacgcgaacg gggtgagagc gccgaagtca tcatgatgag cggccacggc acgatcgacg
      781 ccgccgtgcg ggcgacgaag ctcggcgcgc tggatttcct cgaaaagccg ctatccaccg
      841 accgactgct cgtcatgctc gacaacgcct ttcggctgcg ccgagcgcag gaggagacgc
      901 gcgagctcaa ggcccaagcg ggctatttcg acgagctcgt cggcacgagc agcgcgatgc
      961 tgggcctgca ggaacgcgtg gcacgcgcgg cgcgttccag cgcgagcgtg ctcgtcacgg
     1021 gcgagcgcgg cacgggcaag gagctcgtcg cacgcgcgat tcaccgcgct tcgccgcgcg
     1081 ccaaagcggc gctcgagcgc ctcaactgcg ccgccgttcc cgccgagctc atcgagagcg
     1141 agcttttcgg ccatgaagcc ggcgcgttca cgggcgccac caaacagcgc gccggcaaat
     1201 tcgagcgcgc acacggcggc acgctcttcc tcgacgaggt cggcgacatg ccgctcgcga
     1261 tgcaatcgaa gctcctgcgc gtcttacaag aacgcgagct cgagcgcgtc ggcggcagcg
     1321 agacgttcaa gatcgacgtg cgggtcgtcg ccgcgaccaa ccgcgacctg cgcgcagcct
     1381 gcgagaaggg cgacttccgt gcggatctct acgaccgcct caacgtcgtg cccgtcgaaa
     1441 tcccgcccct gcgcgcgcgg cgcgacgaca ttccgctgct tgctcggcaa ttcctcgagc
     1501 tcgcacgcac gagcaacg
//
LOCUS       DATIML010000934         5669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3374390, whole genome shotgun sequence.
ACCESSION   DATIML010000934 DATIML010000000
VERSION     DATIML010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5669
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3374390"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..1023)
                     /locus_tag="VLJ38_16150"
     CDS             complement(82..1023)
                     /locus_tag="VLJ38_16150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HSU41112.1"
                     /translation="MADLYKELGVSRTATQDEIKKAYRKLAGELHPDKNPGNKKTEAR
                     FKAVNHANQVLSDPEKRKLYDEFGEDALREGFDADAVRAYRSATRGGRVRSPGGGVSL
                     EDLFGGGMPGGGSGNIGDMFGDLFGGRARRGGPMKGSDLASEVHVDFVSAIRGAELRL
                     RVQDGGDEVKVRVPPGAGDGDRVRIAGHGAPSESGGPPGDLLLTIRVDAHPHFERSGL
                     DLYLDLPITVGEAYRGAKVRVPTPEGSVTLTVPKHAQSGQVARLKGKGVKRQTQQGDL
                     YVRFEVKLPVKESAAIEKAVETLDNATDGDVREGIAF"
     gene            complement(1060..1902)
                     /locus_tag="VLJ38_16155"
     CDS             complement(1060..1902)
                     /locus_tag="VLJ38_16155"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU41113.1"
                     /translation="MTRKPEVPFPGTIEELGTVGDAGALAHYSDPAYYTKTYGKRRHD
                     VEYYVRIARKSRGPVLEYGVGNGRVALAVAGAGVEVFGVDLSRTMLDDLEKRLAEAPP
                     KLRSRVELRHGDMRDVRLGRRFPLVIAPFNAVLHLYERADFEAFFARVLEHLEPTGRF
                     VFDFSIPQPDDLARDPERWFGAPRFRHPALDELVRYDERFDYDQFRQLLLVTTRFTPE
                     RGKPWTIPLTHRQLFPREVEALLHYNGFTDIEFTSDFSDTPADRHTDSAVVSCRPARP
                     NSRA"
     gene            complement(1899..2138)
                     /gene="rpoZ"
                     /locus_tag="VLJ38_16160"
     CDS             complement(1899..2138)
                     /gene="rpoZ"
                     /locus_tag="VLJ38_16160"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HSU41114.1"
                     /translation="MARVTVEDCLEKEENRFALVVLAASRTRSLMKGAPQLVNAKNKA
                     PVISLREIAAGRVRYHRPSTEVVQEYIEELAKQTP"
     gene            2268..2756
                     /locus_tag="VLJ38_16165"
     CDS             2268..2756
                     /locus_tag="VLJ38_16165"
                     /inference="COORDINATES: protein motif:HMM:TIGR04366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WbuC family cupin fold metalloprotein"
                     /protein_id="HSU41115.1"
                     /translation="MALATVQLIDEPLIEATLEKARRSPRLRANHNFHASHADGFHRF
                     LNAWLRGTYVAPHRHVAVPKPEAFMLLRGELACFVFDDAGRVLERAVLGRDGRHGIDL
                     AAGVWHTLAPLTDEAVCYEVKPGPWDPATDKEFAPWAPLEGDPRAAAYLAGLLADLAS
                     VY"
     gene            2797..>5669
                     /gene="uvrA"
                     /locus_tag="VLJ38_16170"
     CDS             2797..>5669
                     /gene="uvrA"
                     /locus_tag="VLJ38_16170"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HSU41116.1"
                     /translation="MARATKANGRSRPAPLAGDVIEITGAREHNLSIERLVLPKQKLV
                     VFTGPSGSGKSSLAFDTLYAEGQRRYVESLSTYARQFLGRLDRPAVERLRGLSPTIAI
                     EQKSASSNPRSTVGTITEIHDYLRVLWARAGRQHCVECGKPVQGRSTDEIIAEVLALP
                     KGAKLLLLAPLVAHRKGEFRELFSELGERGFARVRVNGKVTRLDELTPLDKKKKHSIE
                     LVVDRIAVDADSRSRMAEAVELGLKEGKGELVVDVEGRAPLAFSTLRACCGVTYAELS
                     PQSFSFNSPLGMCSACNGLGTRIEIDPELVVPNRSLSIRGGAIAPWGTAVERGDGWTY
                     RMVEAVAKATGVDLDMPFGKIPKKLRDQVLFGIEGKKIQMTWGEAGSENHGSWGVRFR
                     GVIPTLMRRFHETNSERMRDQYRKFMRELACQTCGGKRLRRESLFVRVGGKGVADVMS
                     QSISDAAAWFQTLELAGAHAAIAEGPLREVRSRLQFLLNVGLDYLTLERSGPTLSGGE
                     AQRIRLASQLGSELSGVIYVLDEPSIGLHARDNQRLIAMLQHLRDLGNSVLVVEHDED
                     TIRAADHLVDFGPGAGAQGGRVVFAGPPSELRTADGLTADYLKGKRRIEVPSERRKAK
                     AALVVKGAREHNLKNLTVTFPLGVLVAVAGPSGAGKSSLVNGILLPALARHLHDASAP
                     VGAHDEIRGIEAIDKVISIDQQPIGRTPRSNPGTYTKAFDEIRSLFAELPDARRRGWD
                     AGRFSFNMAGGRCEACEGDGVVRVEMHFLSDVYVTCEVCGGRRYDTETLSVRYRGKSI
                     ADVLETDIDGCLRLFEAHPTLARILRTLSEVGLGYVKLGQSAPTLSGGEAQRIKLARE
                     LSRRQTGRTLYVLDEPTTGLHFEDVKRLLEVLHRLIDAGNSVIVIEHHLDVIKSADHV
                     IDLGPQGGVAGGRVMATGTPEELAQNPKSITGPYLKEALERHRA"
BASE COUNT          924 a         1870 c         1937 g          938 t
ORIGIN      
        1 cgctcgggtc agccgccggc caagttccga actcacaacg agatcggcag cttggtccga
       61 acggatcgcg atcggcgccg gctaaaacgc gatcccttcg cgcacgtcgc cgtcggtcgc
      121 attgtcgagc gtttcgaccg ccttctcgat ggccgccgac tctttcactg gcaatttgac
      181 ctcgaaccgc acgtacagat cgccctgctg cgtctggcgt ttcacgcctt tgcccttgag
      241 gcgcgccacc tgcccgctct gcgcatgctt gggcaccgtg agcgtcaccg agccttcggg
      301 cgtcgggacg cgcaccttgg cgccgcgata cgcttcaccc acggtgatcg gcaagtcgag
      361 ataaaggtcg agtccggaac gctcgaagtg cgggtgcgcg tccacgcgga tcgtgagcag
      421 caaatcgccg ggcggcccgc cgctttcgct gggcgcgccg tgacccgcga tgcgcacgcg
      481 atcgccgtcg ccggccccgg gcggtacgcg gactttgact tcgtccccac cgtcctgcac
      541 gcgcagccgg agctcggcgc cgcgaatggc cgacacgaaa tcgacgtgca cctcgctcgc
      601 gaggtccgac cctttcatcg ggccaccgcg ccgcgctcgc ccgccgaaaa gatcgccgaa
      661 catgtcgccg atgttcccgc tgccgccgcc cggcatgccg ccgccgaaca aatcttcgag
      721 gctcaccccg ccgccgggac tgcgcacgcg cccgccgcgc gtcgccgagc gataggccct
      781 caccgcgtcc gcgtcgaagc cttcgcgcag cgcgtcctca ccgaactcgt cgtagagctt
      841 ccgcttctcg gggtcgctca ggacctggtt ggcgtgattg acggccttga agcgtgcttc
      901 cgtcttcttg ttgccggggt tcttgtcggg atggagttcg ccggcgagct tgcgataggc
      961 ctttttgatc tcgtcctgcg tcgccgtgcg actgacgccg agctctttgt aaaggtccgc
     1021 catggctcca aaaagaacgt aatcagccgt acgcgagttt caagcgcggg aattagggcg
     1081 ggccggccgg cacgagacga ccgctgaatc ggtgtggcgg tcggccgggg tatcgctgaa
     1141 gtcggaggtg aactcgatgt cggtgaagcc gttgtagtgg agcagcgctt cgacctcgcg
     1201 cggaaagagc tggcggtggg tgagcgggat cgtccacggc ttgccgcgct cgggggtaaa
     1261 gcgtgtggtc acgagcaaga gctgccggaa ctggtcgtaa tcgaagcgct cgtcgtagcg
     1321 aacgagctcg tcgagcgcgg ggtgccggaa acgcggcgcg ccgaaccagc gttcggggtc
     1381 gcgcgcgagg tcgtccggct gcgggatcga aaagtcgaag acgaagcgac ccgtcggttc
     1441 gaggtgctcg aggacgcgcg cgaagaaggc ttcgaagtcc gcgcgctcgt agaggtggag
     1501 cacggcgttg aacggcgcga tcacgagcgg gaagcggcgt ccgagccgga cgtcgcgcat
     1561 gtcgccgtgc cggagctcga cgcgggagcg cagcttcggg ggcgcttccg cgagccgctt
     1621 ttcgaggtcg tcgagcatcg tgcgcgagag atcgacgccg aagacttcga cgcccgcgcc
     1681 cgcgacggcg agcgcgacgc gaccgttacc gacgccgtac tcgagcacgg ggccacgcga
     1741 tttgcgcgcg atgcggacgt agtactccac gtcgtgacgg cgtttgccgt acgtcttcgt
     1801 gtagtacgcg gggtcggagt agtgcgcgag cgcgcctgcg tcgccgaccg tgccgagctc
     1861 ttcgatggtg ccgggaaacg gaacttccgg cttccgggtc acggagtctg cttcgcgagc
     1921 tcttcgatgt actcttgaac gacttcggtc gagggtcggt ggtagcgcac gcgaccggct
     1981 gcgatctcac gcaggctgat caccggcgcc ttgttcttgg cgttcacgag ttgcggcgcg
     2041 cccttcatca aggagcgcgt ccgcgacgcc gcgagcacga ccaaggcaaa gcggttttct
     2101 tccttctcga ggcagtcttc aacggtgacg cgtgccatgc agggggcgca acctagccac
     2161 tacgatctgc ttgcgcaagt gaacccgcat gatttctgcg cgtttcgcgc gcgcatcgct
     2221 gcctgtccgt tcagtattcg agccttttgc gctaagtatg gcgctccatg gctctcgcga
     2281 ccgtgcagct catcgacgag ccgctgatcg aagcgacgct cgaaaaggcg cgccgttcgc
     2341 cgcggctccg cgccaatcac aatttccatg cgtcccacgc cgacggcttc caccgcttcc
     2401 tgaacgcgtg gctgcgcggc acttacgtcg ccccgcaccg ccacgttgcc gtgccgaaac
     2461 cggaggcgtt catgctgctg cgcggtgagc tcgcctgttt cgtgttcgac gacgcgggtc
     2521 gggtcctcga gcgggccgtg ctcggccgcg acggtcgtca cggcatcgat ttggcagcgg
     2581 gggtctggca cacgctcgcg ccgctcaccg acgaggccgt ctgttacgag gtcaagccgg
     2641 gcccctggga tccggcaacg gacaaggagt tcgcgccctg ggccccgctc gaaggcgacc
     2701 cccgcgccgc cgcgtacctg gcgggactgc tggccgatct cgcgagcgtg tactgaactt
     2761 gtgttcaggt tactgcggtg ctatggcccg gcggccatgg cgcgcgcgac gaaggcaaac
     2821 ggacggagcc ggccggcgcc gctcgccggc gacgtgatcg agatcacggg agcgcgcgag
     2881 cacaacctct cgatcgagcg cctcgtgctg ccgaagcaga agctcgtcgt gttcacggga
     2941 ccgagcggct ccggtaaatc gagcttggcg ttcgatacgc tctacgcgga aggccagcgc
     3001 cggtacgtgg agtcgctctc cacgtacgcg cggcaatttt tgggaaggct cgatcgaccc
     3061 gccgtcgagc gcctgcgcgg gctctcgccc acgatcgcga tcgaacagaa gagcgcgtcc
     3121 tccaatccgc gctcgaccgt gggcaccatc acggagatcc acgattactt gcgcgtgctc
     3181 tgggcgcgcg ccggcaggca gcactgtgtc gaatgcggca agcccgtgca gggccgcagc
     3241 acggacgaga tcatcgccga ggtgttggcg ctaccgaagg gggcgaagct cttgctgctc
     3301 gcgccgctcg tcgcgcatcg aaagggcgaa tttcgcgagc ttttcagcga gctcggcgaa
     3361 cgtggcttcg cgcgcgtgcg cgtcaacggc aaggtgacgc gcctcgacga gctcacgccg
     3421 ctcgataaaa agaagaagca cagcatcgag ctcgtcgtcg atcgcatcgc ggtggacgca
     3481 gactcgcgct cacgcatggc cgaggccgtc gagctcggac tcaaggaggg caagggtgag
     3541 ctcgtggtcg atgtcgaggg cagagcgccg ctcgcctttt cgacgctgcg cgcttgttgc
     3601 ggcgtgacgt acgccgagct cagcccgcaa agcttctcgt tcaattcacc gctcgggatg
     3661 tgcagcgcgt gcaacggact cggcacgcgc atcgagatcg atccggagct cgtcgtgccc
     3721 aatcgctcct tgtcgatccg cggcggcgcg atcgcgccct ggggcaccgc cgtcgaacgg
     3781 ggcgacggct ggacgtaccg catggtcgag gccgtcgcga aggcgacggg cgtcgatctc
     3841 gacatgccgt tcggcaaaat ccccaaaaag ctccgcgatc aggtgctctt cggcatcgag
     3901 ggcaagaaga tccagatgac gtggggcgag gcaggcagcg agaaccacgg cagctggggc
     3961 gtgcgcttcc gcggcgtgat cccgaccttg atgcggcgct tccacgagac gaactccgag
     4021 cgcatgcgcg accaataccg gaagttcatg cgcgagctcg cgtgtcagac ctgcggcggc
     4081 aagcgcctgc gccgggagag cttgttcgtg cgtgtcggcg gcaagggcgt ggcggacgtg
     4141 atgtcgcagt cgatcagcga cgcggccgcg tggttccaaa cgctcgagct cgcaggcgcg
     4201 cacgccgcga tcgccgaggg gccgctacgc gaggtgcgca gtcgcttgca gttcttgctc
     4261 aacgtcgggc tcgattacct cacgctcgag cgctccgggc ccacgctttc gggcggcgaa
     4321 gcgcagcgca ttcggctggc gagccagctc gggagcgagc tttccggcgt gatttacgtg
     4381 ctggacgagc cgagcatcgg cctgcacgcg cgcgacaatc agcggctgat tgcgatgctc
     4441 cagcacctgc gcgatctcgg caactccgtg ctcgtcgtcg agcacgacga agacacgatt
     4501 cgcgccgccg atcacctcgt cgatttcggg cccggcgccg gagctcaggg cggacgcgtc
     4561 gtgttcgccg gcccgccgag cgagctccgc accgccgacg gcctcaccgc cgactacttg
     4621 aagggcaagc ggcgcatcga agtgccgagc gagcggcgca aggccaaggc cgcgctcgtc
     4681 gtgaagggcg cgcgcgagca caacttgaag aatctcacgg tcacgttccc gctcggcgtg
     4741 ctcgtcgccg tcgccggacc gagcggcgcc ggcaagagct cgctcgtgaa cggcatcttg
     4801 ctgccggccc tcgcgcgcca cctgcacgac gcgagcgctc cggtgggcgc gcacgacgaa
     4861 atccgcggca tcgaagcgat cgacaaggtg atttcgatcg atcagcagcc gatcgggcgc
     4921 acgccgcgca gcaatcccgg cacgtacacg aaggcgttcg acgagattcg ctcgctgttc
     4981 gccgagctgc ccgacgcgcg gcgccgtggc tgggacgcgg ggcgcttcag cttcaacatg
     5041 gcgggcgggc gctgcgaggc gtgcgagggc gatggcgtcg tgcgcgtcga gatgcacttt
     5101 ttgagcgacg tgtacgtgac gtgcgaagtg tgcggcggtc ggcgctacga cacggagacg
     5161 ctctcggtgc gctaccgcgg caagagcatc gcggatgtgc tcgagacgga catcgacggc
     5221 tgccttcgcc tgttcgaagc gcatccgacg ctcgcgcgca tcctgcgtac tttgtcggaa
     5281 gtcgggctcg gttacgtgaa actcggacaa tcggcgccga ccttgagcgg cggcgaggcg
     5341 caacggataa agctagcccg cgagctttcc cgccgccaaa ccgggcgcac cctgtacgtc
     5401 ctcgacgagc cgacgacggg cctacacttc gaggacgtga agcgactgct cgaggtgttg
     5461 catcggctga tcgacgcggg caacagcgtg atcgtcatcg agcatcacct cgacgtcatc
     5521 aagtcggccg atcacgtgat cgatctcgga ccccagggcg gcgtcgcggg cgggcgcgtc
     5581 atggcgacgg gcacgccgga agagctcgcg caaaatccga agagcatcac gggcccctac
     5641 ttgaaagaag cactcgagcg gcaccgcgc
//
LOCUS       DATIML010000935         1539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3665710, whole genome shotgun sequence.
ACCESSION   DATIML010000935 DATIML010000000
VERSION     DATIML010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3665710"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VLJ38_16175"
     CDS             <1..594
                     /locus_tag="VLJ38_16175"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSU41117.1"
                     /translation="REPGTRRGQGGAGRVALTFDDGPTSLTREYLAVLERYDVKATFF
                     LVGELCARHPELVLAIQRAGHELAGHGYTHRRFTSLTPRALLDELERTRALLPAEPNK
                     RPVVRPPHGSVSFTSTVTSASAGYTTVLWSYDSNDWATHQAADVTRTFETEPVDPGEI
                     ILFHEGQTWTLDALPRVIERLRGAGHELTTTGELLGR"
     gene            557..>1539
                     /locus_tag="VLJ38_16180"
     CDS             557..>1539
                     /locus_tag="VLJ38_16180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41118.1"
                     /translation="MSLRRRVNCLAGSALCLALGCGKGPPLTVLGDSTRLRASEPSPS
                     VSPFFDGARVHLRGARGETLGLEVRLTDGHERPVSLELASGATVSGFAVGSLDVEEPS
                     SELYGPSKGRGRYPDVLDPVGGAVLTKELAYFDVAIPQSSEPGRYSGTLRVGERAIPV
                     VLDVSRARIHLEHAPLVWVFYAPRELARVHGVPDDDSPAELAVEARYYDLFRAHGALL
                     ASDLPLARTAARRDFMHDVKYWPVALDTTTDDAIERDTRAFVAWFAGTGITPFAIPID
                     EPHSAEQKARTRHIADVIGRAGGGRPSLLRGVTDAPNAAYGDSIDVYFSPAA"
BASE COUNT          224 a          561 c          525 g          229 t
ORIGIN      
        1 cgcgagcccg gcacgcgacg gggccagggc ggcgccggac gcgtcgcgct gaccttcgac
       61 gacggaccga cctcgctcac gcgcgagtac ctagccgtgc tcgagcgcta cgacgtgaag
      121 gcaacgttct tcctcgtcgg cgagctctgc gcgcgtcacc cggagctcgt gctcgcgatt
      181 cagcgcgcgg gccacgagct cgcggggcac ggttacacgc accgtcgctt cacgagtctc
      241 acgccgcgag cgctgctcga cgagctcgag cgcacgcgcg cgctcttgcc ggccgagccg
      301 aacaagcgcc ccgtcgtgcg cccgccgcac ggctccgtct cgttcacctc gaccgtcacg
      361 tccgcttcgg ccggctacac cacggtgctc tggtcgtacg actcgaacga ttgggcgacg
      421 caccaagcgg ccgacgtgac gcgaacgttc gagaccgagc ccgtggatcc cggggagatc
      481 atcctgtttc acgaagggca gacctggacg ctcgacgcgc taccccgcgt catcgagcgg
      541 ctcaggggcg caggccatga gcttacgacg acgggtgaat tgcttggccg gtagcgcgct
      601 ctgcctcgca ctcgggtgcg gcaaagggcc accgcttacg gtgctcggtg attcgacgcg
      661 cctgcgagcg agcgagccgt cccccagcgt gtccccgttc ttcgacgggg cgcgcgtgca
      721 tttgcggggt gcgcgcggcg agacgctcgg gctcgaggtg cgactgaccg acgggcacga
      781 gcgtccagtt tcgctcgagc tcgcgagcgg cgcgacggtc tcgggcttcg cggtcgggtc
      841 gctcgacgtg gaggagccga gcagcgagct ctacgggccg agcaagggac gcgggcgcta
      901 ccccgacgtg ctcgaccccg tcggcggggc cgtgctcacc aaagagctcg cgtacttcga
      961 cgtggcgatt ccgcaaagca gcgagcccgg ccgctactcg ggcacgctcc gcgtcggcga
     1021 gcgcgcgatc ccggtcgtgc tcgatgtgag ccgcgcgcgt attcacctcg agcacgcgcc
     1081 gctcgtctgg gtcttctacg cgccacgtga gctggcgcgc gtgcacggcg tgccggacga
     1141 cgattcgccg gccgagctcg ccgtggaagc tcgctattac gacctttttc gcgcccatgg
     1201 cgcgctgctc gcgtcggatt tgcccctcgc gcgcacggcg gcgcgccgcg acttcatgca
     1261 cgacgtgaag tattggcccg tcgcgctcga cacgacgacg gacgacgcca tcgagcgcga
     1321 cacgcgcgcc ttcgtcgcct ggttcgctgg caccggcatc accccgttcg cgattccgat
     1381 cgacgagccc cacagcgccg aacaaaaagc gcgcacgcgc cacatcgccg acgtcatcgg
     1441 gcgcgcgggc ggcggaagac cgagcttgct acgcggcgtc acggacgctc cgaacgcggc
     1501 ctacggcgac agcatcgacg tctacttctc gcccgcggc
//
LOCUS       DATIML010000936         4817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_488964, whole genome shotgun sequence.
ACCESSION   DATIML010000936 DATIML010000000
VERSION     DATIML010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4817
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488964"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1317
                     /locus_tag="VLJ38_16185"
     CDS             <1..1317
                     /locus_tag="VLJ38_16185"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSU41119.1"
                     /translation="AAVATIGRRDAATLHPGLGLRGDLGFDSLMLLELLVALESQHGR
                     TFDAERLNACHTLGDVETLLRERPETRRAVATTTIADIEPGSLDLPEPLREAAMYWLG
                     RAQHGFYDRVLTTKVTGRAHIPYNRNVIVVANHASHLDMGLVKYALGSYGSELVSLAA
                     QDYFFEGNRFLSAYFENFTRLVPMPRNGGLRQGLRKAGELIEAGKTLLLFPEGTRSTD
                     GLVHEFKAIVGHLALHHRVDVLPLYLGGTHAALPKGAKVVRTREVEARIGPVLEATAL
                     ARLTAGLSAGDASRKAAHLIEEAVRALGRGSLLELARFDAEASVAPPPRPTLHDVFQE
                     LERRFAPNKVERPTSYYFALGDDRFTLLVSKDGCEVKQGKHVDAADCVLKTSPDLFAR
                     IVREAYVPSPAEFLSGAVKTNNIGLLLEFQKAFRLLERSGGPADGE"
     gene            1317..2378
                     /locus_tag="VLJ38_16190"
     CDS             1317..2378
                     /locus_tag="VLJ38_16190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU41120.1"
                     /translation="MSSGAGIENGAADGRRPVAWVGGATGFLGGHVVSALEARGHEVV
                     PVSRSGGDGRARAVDVLDADAVSASARGCEWAFLCTGKVTRERDDSEELYRLHVTGTK
                     HALAGLRRAGVRRVVVASTSGTLAVGTDRDRIADEGCRAPLEVIAPWPYYRTKLYAER
                     EALAANAPPDFEVVVVNPSLLLGPGDVRESSTGDVRRFLEGVIPAVPAGGIAFVDVRD
                     AACGMLLAAERGRPGERYILNAQNLTLAAFFQRLERISGVKAPLLKLPASRPLALGIG
                     HLFSKAVRAIGGVPPVSEASIEMGQYFWYCDASKAERELGFRARDPGETLRETVDDLV
                     TRKVVFPRRARLGFVTAAR"
     gene            2536..4134
                     /locus_tag="VLJ38_16195"
     CDS             2536..4134
                     /locus_tag="VLJ38_16195"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU41121.1"
                     /translation="MVDEFVEGQVLDGKYRIERVIGRGGMGVVVAARHLVLDEQVAIK
                     FLSDQAWMNGEVVARFEREARAAVKIKSEHVVRVIDVGRLASGAPFMVMEFLQGEDLS
                     NRLVQYGPLPIAQAADFVLHACVALASAHAAGIVHRDIKPGNLFCTQGSDGELLVKVL
                     DFGISKLTEAANRAGGLSVTKTSAVLGSPLYMSPEQIKSSKDVDGRTDVWSLGVVLFE
                     LVTGQVPFPGESFGEVAIKIATQAPPPLVQFRRDVPVGLDAVIGRCLEKERENRYANI
                     GELALALRRYASGRGQVVVERISRISLSSSGRALDLQDSAAVSAAARSAEPPPSLGRS
                     DRQSNAMPETVSAWDGGGERRSNRRAVVGTTAVIALALGVVGAAAFRHGLVPATETSA
                     GSVAAPPPPVAPVASTPALVAATSSAAPVVSPAPPETPPAVAPAPTTTAEPSESPEPP
                     KRAGSGRRPTRTPAPAPTATHATASLPAPTPAPAPAPVPKPEPAARPAPEPAARPAAP
                     KADCDPPYVFDDQGRKRFKPECFK"
     gene            4143..>4817
                     /locus_tag="VLJ38_16200"
     CDS             4143..>4817
                     /locus_tag="VLJ38_16200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41122.1"
                     /translation="MRLAPALFRITAGLSLFVCAPARAAEPNTNQCLAASDASLKAGN
                     EHKLRAERQELLICAASSCPGEIRKECARRVEEVNASIPTLVFQAKDPSGADLSAVKV
                     TMDGDVLVEQLNGTALAVDPGQHAFTFETAGQPTIEKQLVVHEGEKERREAIQFGSPT
                     GDDVNHPTETAASGGHKTQKIIAVVVAGVGVVGLGLGGTFGMMAMSRKDDAHKMCPDA
                     CKDAEGQ"
BASE COUNT          752 a         1686 c         1654 g          725 t
ORIGIN      
        1 gctgccgtgg cgacgatcgg acgccgcgac gccgcaacgc tccacccggg cctcggcttg
       61 cgcggcgatc tcggtttcga ctcgctgatg ctgctcgagc tgctcgtcgc gctcgagagt
      121 caacacggtc gcaccttcga cgccgagcgg ctcaacgcct gccacacgct cggcgacgtc
      181 gagacgctct tgcgcgagcg ccccgaaacg cggcgcgccg tcgcgacgac gaccatcgcc
      241 gacatagagc caggctcgct cgacctgccg gaaccgctgc gcgaagcggc gatgtactgg
      301 ctcggccgcg cgcagcacgg cttctacgac cgcgtgctca cgaccaaggt cacggggcgc
      361 gcccacatcc cctacaaccg caacgtgatc gtggtcgcca atcacgcgag ccacctcgac
      421 atggggctcg tgaagtacgc gctcggcagc tacggcagcg agctcgtctc gctcgcggcg
      481 caggactact ttttcgaggg gaaccgcttc ctcagcgctt atttcgagaa tttcacgcgg
      541 ctcgtgccga tgccgcgcaa cggcggcttg cgccaaggcc tacgcaaagc gggcgagctc
      601 atcgaggcag gcaagacgct cttgctcttc cccgaaggca cgcgcagcac cgacggcctg
      661 gtgcacgagt tcaaagccat cgtcggccac ctcgcgctcc accaccgcgt cgacgtgctg
      721 ccgctctacc tcggcggcac gcacgcggcg ctgcccaagg gcgccaaggt cgtccgcacg
      781 cgtgaggtcg aggcgcgcat cggtcccgtg ctcgaggcga cggcgcttgc acgcctcacc
      841 gcggggctct cggccggcga cgcgtcgcgc aaagccgcgc acctgatcga ggaagcggtg
      901 cgcgcgctcg gacgcggctc gctgctcgag ctcgcacgct tcgatgccga ggcaagcgtc
      961 gcgccgccgc cgcgcccgac gctccacgac gtgttccaag agctcgagcg gcgcttcgcg
     1021 ccgaacaagg tcgagcgccc gaccagctac tatttcgcac tcggcgacga tcgcttcacg
     1081 ctgctcgtct ccaaagacgg ctgcgaggtg aaacagggca agcacgtcga cgccgcggat
     1141 tgcgtgctca agacgtcgcc ggatctcttc gcgcgcatcg tgcgcgaagc ctacgtcccg
     1201 tcgcccgcgg agttcttgtc gggagcggtg aagaccaaca acatcggcct gttgctcgag
     1261 tttcagaaag cctttcggct gctcgagcgg agcggcgggc ccgcggatgg cgagtgatga
     1321 gcagcggagc agggatcgaa aacggtgcgg ccgacggccg gcgacccgtg gcgtgggtcg
     1381 gtggcgcgac gggatttttg ggtggtcacg tcgtctcggc cctcgaagcg cgcgggcacg
     1441 aggtcgtccc ggtgtcgcgc tcgggcggcg acgggcgcgc gcgcgccgtc gacgtgctcg
     1501 acgccgacgc cgtgagtgcg agcgcacgcg gttgtgagtg ggcgtttctc tgcacgggca
     1561 aagtgacgcg cgagcgcgac gactccgagg agctctaccg cctgcacgtg acgggcacga
     1621 agcacgcgct cgcagggctc cgccgcgcgg gcgtgcgccg cgtcgtggtg gcgagtacga
     1681 gcggaacgct cgccgtcggc accgatcgcg accgcatcgc cgacgagggc tgccgcgcgc
     1741 cgctcgaggt gatcgcgccc tggccctact accgcaccaa gctctacgcc gagcgcgagg
     1801 cgctcgccgc gaacgcgccc ccggatttcg aagtcgtcgt cgtcaatccg agcctcttgc
     1861 tcgggccggg cgacgtgcgt gaatcctcga ccggcgacgt gcgccgcttt ctcgaaggcg
     1921 tgatccccgc cgtcccggcc ggcggcatcg cgttcgtcga cgtgcgggac gccgcttgcg
     1981 gcatgctgct cgccgccgaa cgcgggcggc ccggcgaacg ctacatcctg aacgcgcaaa
     2041 acctgacgct cgccgcgttc tttcagcgac tcgagcgcat cagcggcgtg aaagcgccgc
     2101 tcctcaagct gcccgcttcg cggccgctcg cgctcggcat cggccatctt ttcagcaagg
     2161 ccgtgcgcgc gatcggcggc gtcccgcccg tctcggaggc gagcatcgag atgggtcaat
     2221 acttttggta ctgcgacgcg agcaaagccg aacgcgagct cgggtttcgc gcccgggacc
     2281 cgggcgagac gctgcgggag acggtggacg acctcgtgac gcgcaaggtc gtttttcccc
     2341 ggcgcgcccg gctcggcttc gtgacggcgg cgaggtaagg ggactgaggc ttttgtccca
     2401 taatatcgag cgattgcagc cgtcatcacc cttcgggatg cgctcgggag ttcggggcag
     2461 gctatcggtg ccactggaac ttgcgcgtga cgtgtgacgg tggcggcgtt tcgggttact
     2521 aacgagtgac cagggatggt ggacgaattt gtcgaaggcc aggtcctgga tggcaagtac
     2581 cgcatcgagc gggtgatcgg gcgcggcggc atgggcgtcg tggtggcggc gcgccacctc
     2641 gtcctcgacg agcaggtcgc gatcaagttc ctttccgatc aagcgtggat gaacggagag
     2701 gtcgtcgcgc gcttcgagcg agaggcgcgc gcggccgtca agatcaagag cgagcacgtg
     2761 gtgcgcgtga tcgacgtggg caggctcgcg tccggcgcgc cgttcatggt gatggagttc
     2821 ttgcaaggcg aggatctgtc caatcgcctc gtgcagtacg ggccgttgcc catcgcccaa
     2881 gccgcggact tcgtgctgca tgcgtgcgtc gcgttggcga gcgcgcacgc ggcgggcatc
     2941 gtccaccgcg acatcaagcc gggcaatctc ttttgcacgc agggcagcga cggcgagcta
     3001 ctcgtcaagg tgctcgactt cggcatttcg aagctcacgg aagccgccaa tcgcgcgggc
     3061 gggctctcgg tgacgaagac ttccgccgtg ctcggctcgc cgctctacat gtcgcccgag
     3121 cagatcaaga gctcgaagga cgtcgacggt cggacggacg tctggtccct cggcgtcgtg
     3181 ctgttcgagc tcgtcaccgg ccaagtgccg tttcccggcg agagcttcgg cgaagtcgcg
     3241 atcaagatcg cgacgcaggc gccgcccccg ctcgtccaat tccggcgtga cgtgcccgtc
     3301 gggctcgacg ccgtcatcgg gcgctgcctc gagaaagagc gcgaaaaccg ctacgcgaac
     3361 atcggtgagc tcgcgctcgc cctccgccgt tacgcgtcgg gtcgcggaca agtcgtagtc
     3421 gagcggattt cgcgcatctc gctctcgagc tcgggccgcg ctctcgacct tcaggactcg
     3481 gcggcggtct ccgcagcggc gcggagcgcc gagccgccac cgtcgcttgg ccgatccgac
     3541 cgccagtcga acgcgatgcc ggaaacggtt tcggcttggg acggcggcgg cgaacgccgc
     3601 tcgaaccgcc gcgccgtggt cggcacgacg gccgtcatcg ctctcgcgct cggcgtcgtc
     3661 ggcgcggccg cgttccggca cggtctcgtg cccgcgaccg aaacgagcgc cggctcggtt
     3721 gccgcaccgc ccccgcccgt cgcgccggtc gccagcacgc ccgcgctcgt cgcggccacg
     3781 agctctgcgg ctcccgtggt ttcgcccgca cccccggaaa cgccgccggc cgtcgcgccc
     3841 gcgccgacaa cgaccgctga gccctcggag tcgcccgagc cgccgaagcg cgccgggtca
     3901 ggacgccgtc cgacgcgcac gccggccccc gctccgacgg cgacgcacgc aaccgcatca
     3961 ctgccggcgc ccactccagc accagcacct gcacccgtgc ccaagccgga gcccgctgct
     4021 cgcccagcgc cggagcccgc cgcgcgtccg gccgcgccca aagccgattg cgatccgccc
     4081 tacgtcttcg acgaccaggg ccgcaaacgt ttcaagcccg aatgcttcaa gtgaaaagaa
     4141 cgatgcgcct cgctcctgct ctctttcgaa tcaccgccgg tctgagtctc ttcgtgtgcg
     4201 cgcctgcgcg ggcggccgaa ccgaacacca atcagtgctt ggcggcgagc gatgcctcgc
     4261 tcaaggcagg caacgagcac aagctccgtg ccgagcgcca agagctcctc atctgcgcgg
     4321 cgtcgagctg ccctggggag atccgcaagg agtgcgcgcg gcgcgtggaa gaggtgaacg
     4381 cctcgatccc gacgctcgtg ttccaagcca aggacccgag cggcgccgat ctgagcgccg
     4441 tgaaggtgac gatggacggg gacgtgctcg tcgagcagct caacggcacc gcgctcgcgg
     4501 tcgatcccgg ccagcacgcg ttcacgttcg agactgcggg ccagccgacg atcgagaagc
     4561 agctcgtcgt gcacgagggc gaaaaagagc gccgcgaggc gattcaattc ggctcgccca
     4621 cgggcgatga cgtgaaccat ccgacggaga cggcggcgag cggcgggcac aagacgcaga
     4681 agatcatcgc cgtggtcgtg gccggcgtgg gtgtggtcgg tctcggcctc ggcggcacgt
     4741 tcggaatgat ggcgatgtcg aggaaggacg acgcccacaa gatgtgtccc gacgcgtgca
     4801 aggacgccga gggccaa
//
LOCUS       DATIML010000937         2560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1645930, whole genome shotgun sequence.
ACCESSION   DATIML010000937 DATIML010000000
VERSION     DATIML010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1645930"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..861
                     /locus_tag="VLJ38_16205"
     CDS             <1..861
                     /locus_tag="VLJ38_16205"
                     /inference="COORDINATES: protein motif:HMM:NF021926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST C-terminal domain-containing protein"
                     /protein_id="HSU41123.1"
                     /translation="PEAIVSHAQNGGDAASALATRLAELGRGQGSTALVFAKADGFGV
                     DAIEPLYASRTANIIGAGTPGPSPIAAVDREGRLGLGICGALLVRGVTPAHVRSSPAC
                     RLLMPLRPITGARGPLLTEIAGEPALEVLQSAARGLAGQPLILAMIAPETREEEGGRP
                     EFVVRGIQGVDPARGALVLGGELKPGWRIAFAVRDAAAARVDLELCTRDLAREAAGAA
                     PLFGVYVSCAGRGSQLYENPDVDLRVVRSRFPDVPFVGLHSAFEIAPFDGRAAVHFYT
                     GVLGLFTAPS"
     gene            923..>2560
                     /locus_tag="VLJ38_16210"
     CDS             923..>2560
                     /locus_tag="VLJ38_16210"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA];
                     GO_process: GO:0071978 - bacterial-type
                     flagellum-dependent swarming motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HSU41124.1"
                     /translation="MAEIGTARATAPASAAAALRLAQPKRGLGAADAALAALVVGVVG
                     LMIVPLPTRLLDLLIASNLSFSVVLLLVALYASDALKIAAFPTVLLITTLTRLALNVS
                     ATRLILLQADAGEVIRAFGNFVVRGNYVVGAVIFAILTIIQFVVIAKGGERVAEVGAR
                     FTLDAMPGKQMAIDAELRSGAIDGAQARVRRHALARESQFYGAMDGAMKFVKGDVIAS
                     LLITVVNIGAGLAVGVLQRDMEPAAALRRYGLLTIGDGLVSQIPSLVIATAAGVLVTR
                     VASEESEQSLGSELARQLFAQPQALRVAAAFACLLGAVPGLPALPFFVIGGLLFAASR
                     ARSASVRAAAETQATEPVQRPGGAAAPARFVPVIVPWSLDVSADLAHLFDDDSRGATL
                     KRPGLRSAAAALRELVFRELGVPLPPARVAVAPELPPRHFVLSLQELPARVVELPATL
                     ADAETAEFVVGQALPVLRQRASDFLGIAETQALLDQLEQVAPATVRQVVPKPIAVTQL
                     ADVLRRLVEERQSVRDLKGILEALALVGHAERDALNLA"
BASE COUNT          312 a          919 c          914 g          415 t
ORIGIN      
        1 ccggaagcca tcgtcagcca cgcgcagaac ggcggcgatg ccgcctcggc cctcgcgact
       61 cggcttgcgg agctcggccg cggccagggc tcgacggcgc tcgtcttcgc caaggcggac
      121 ggcttcggcg tggacgcgat cgagccgctc tacgcgtccc gcacggcgaa catcatcggc
      181 gcgggcacgc cggggccttc gcccatcgcg gcggtcgacc gtgagggccg gctcgggctc
      241 ggcatctgcg gggcgttgct cgtgcgtggg gtcacaccgg cgcacgtgcg ctcctccccg
      301 gcttgccggc tgctcatgcc gctccggccc atcacaggcg cacgcgggcc gctcctcacc
      361 gaaatcgccg gcgagcccgc gctcgaggtc ttgcagagcg ccgcgcgagg actcgcgggg
      421 cagccgctga ttttggcaat gatcgcgcca gagacacgcg aagaagaggg cgggcgtccc
      481 gagttcgtcg tccgcggcat tcagggcgtc gatccggcgc gcggcgcgct cgtgctcggc
      541 ggggagctga agccggggtg gcggatcgcc tttgccgtac gcgacgccgc cgcggcgcgc
      601 gtcgatctcg agctttgcac gcgcgatctc gcacgggaag ccgcgggcgc ggcgccgctc
      661 ttcggggtgt acgtgagctg cgcggggcga ggctcgcagc tttacgagaa cccggatgtc
      721 gatctacgcg tcgtgcgctc gcgttttccc gacgttccgt tcgtggggct ccactcggcc
      781 ttcgagatcg cgccgttcga cggacgcgcg gccgtgcact tctatacggg cgttctcggg
      841 ctctttacgg cgccgagctg aattacggcg ccgagctgaa gcgcttccgc gcgccggggc
      901 gcccggtgta cgctcgcgcg cgttggcgga gatcgggaca gccagagcga ctgcgccggc
      961 gagcgccgcg gcggcgctgc gacttgcaca gccgaaacgc gggctcggcg ccgccgacgc
     1021 cgcgctcgcg gccctggtcg tcggcgtcgt cggcttgatg atcgtgccgc taccgacgcg
     1081 tctgctcgac ctcttgatcg cgtcgaacct gtccttctcg gtggtgctct tgctcgtcgc
     1141 gctgtacgcg tccgacgcgc tcaaaatcgc cgcgttcccg acggtgctct tgatcacgac
     1201 gctcacgcgg ctcgcgctga acgtgtcggc gacgcgcctc atcttgctgc aggcggacgc
     1261 gggcgaggtc atccgtgcct tcggcaattt cgtcgtgcgc ggcaactacg tggtcggcgc
     1321 cgtcatcttc gccatcctga cgatcattca gttcgtcgtg atcgccaagg gcggcgagcg
     1381 cgtggccgaa gtcggcgcgc gtttcacgct cgacgccatg cccggcaagc aaatggccat
     1441 cgacgccgag ctccgctcgg gcgcgatcga cggcgcgcag gcccgagtgc gccggcacgc
     1501 cctggcgcgt gaaagccaat tttacggcgc gatggacggc gccatgaagt tcgtgaaggg
     1561 cgacgtgatc gcgtcgctgc tgatcacggt cgtcaacatc ggcgcagggc tcgccgtggg
     1621 cgtgctgcag cgggacatgg agcccgcggc cgcgctccgc cgttacggct tgctcacgat
     1681 cggcgacggt ctcgtgtcgc aaatcccgtc gctcgtgatc gccacggcgg cgggcgtgct
     1741 cgtcactcgc gtggcaagcg aagagagcga gcagtcgctc ggctccgagc tcgcgcggca
     1801 gctctttgcg caaccgcagg cgctcagggt cgcggcggcg ttcgcgtgct tgctcggcgc
     1861 cgtgcccgga ctgcctgccc tgcccttctt cgtgattggc gggctcctgt tcgcggcgtc
     1921 gcgcgccagg agcgcgagcg tgcgcgcagc ggccgaaacg caggccaccg agcccgtgca
     1981 gcgaccgggc ggtgcggcgg cgccggcgcg cttcgtgccc gtgatcgtcc cttggtcgct
     2041 cgacgtgagc gcagacctcg cgcacctgtt cgacgacgat tcgcgcggcg cgacactcaa
     2101 gcgtcccggc ttgcgctcgg cggccgcggc gctgcgcgag ctcgtgtttc gggagctcgg
     2161 ggtgccgctg ccgcccgcgc gcgtcgccgt ggcgcccgag ctcccgcccc ggcacttcgt
     2221 gctttcgctc caggagctcc cggcgcgcgt cgtcgagctt cccgcgacgc tagccgacgc
     2281 cgaaacggcg gagttcgtcg tcggccaggc gctgcccgtc ctgcgccagc gggcgtcgga
     2341 cttcctcggc atcgccgaga cgcaagcgtt actcgaccaa ctcgagcaag ttgcgcccgc
     2401 caccgtgcgc caggtcgtgc caaagccaat cgcggtgacc cagctcgccg acgtgctccg
     2461 ccggctcgtg gaggagcggc agagcgttcg cgacctcaag ggcatcctcg aggcgctcgc
     2521 gctcgtcggg cacgccgagc gcgatgccct gaatctcgcc
//
LOCUS       DATIML010000938         1693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1936672, whole genome shotgun sequence.
ACCESSION   DATIML010000938 DATIML010000000
VERSION     DATIML010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936672"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..>1693)
                     /locus_tag="VLJ38_16215"
     CDS             complement(85..>1693)
                     /locus_tag="VLJ38_16215"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HSU41125.1"
                     /translation="LGVAALVAFLAFGYLAGAGEPPTGEARATAACVFSHLGIFMTWA
                     TFAIISGLVVNRGARSSLDLWLKGFPPRQIVYIGFGAHVLAIVLASAFSGTEQGLVFR
                     DVAYGGGAGLLIFSILFGAGYAAFAIRNEPRVGLRLLGLPHAFVADGLKTLWKEDFIP
                     PNADKFLHGLAPFISFFPALTVFAVIPFGDTLCFGTDAKGHLDITRLAHMVPREGMCT
                     AGALRLQVVDLNVGILYFFALAGTGIVGAALAGWASDNKYSLLGGLRAASQMVSYEVT
                     MGLTVVGALMVYGTLRLDEMVRWQGENTWGIFVQPLAFVLFFASAVAESKRIPFDLPE
                     GESEIVAGYFTEYAGMKFAMFFFSEYIAVVSSSALLAVLFLGGWNLPFLYRDGFHVAI
                     GGAALWDQPLSHGFVIVLGLLAFMLKVVGLCWLQLMIRWTLPRFRYDQLMRLGWRKLL
                     PASLVNVLATGLVVMLVQSSEGALTTALRTLCDVLAAVVGLSMIGAVVWLVVFLLKPT
                     HKRTMLASSSAQFAAQMGGTRTARMEA"
BASE COUNT          357 a          534 c          585 g          217 t
ORIGIN      
        1 aggcttgcac ggccggtgtg cgacgcggcc tggcgatggg cgtgccgacg actttgcggg
       61 gaccgagggg cactgcggac atgtctaggc ttccatcctg gcggtgcggg taccgcccat
      121 ctgtgcggcg aattgcgctg agctcgacgc gagcatcgtg cgcttgtgag tcggcttcag
      181 taagaacacc acgagccaaa cgacggcgcc gatcatgctc aggccgacca cggccgcgag
      241 cacgtcgcag agcgtacgaa gagccgtcgt gagcgcgcct tccgacgact gcacgagcat
      301 cacgacgagg cccgtcgcga gcacgttcac gagcgaggcg ggcaagagct tgcgccaacc
      361 gagccgcatg agctggtcgt agcggaagcg cggcaaggtc cagcggatca tgagctgcag
      421 ccagcacaaa ccgacgacct tgagcatgaa ggcgagcaag ccgagcacga tcacgaagcc
      481 gtgggagagc ggctgatccc agagggcggc gccgccgatg gcaacgtgga agccgtcccg
      541 atagaggaac ggcaggttcc agccaccgag gaagagcacg gccaggagcg cgctcgacga
      601 gacgacggcg atgtattccg agaagaagaa catcgcaaac ttcatgccgg cgtattccgt
      661 gaagtagccg gcgacgattt cgctctcgcc ttcgggcaag tcgaacggaa tgcgcttcga
      721 ctcggcgacg gccgacgcga agaacaagac gaacgcgagc ggctgcacga agatgcccca
      781 cgtgttttcg ccctgccagc gcaccatctc gtcgaggcgc agcgtgccgt acaccatcaa
      841 cgcgcccacg accgtgaggc ccatcgtgac ctcgtacgag accatctggc tcgcggcgcg
      901 caggccgccc aagaggctgt acttgttgtc gctcgcccag ccggcgagcg ccgcgcccac
      961 gatgcccgtg ccggcgagcg cgaaaaagta gagaataccg acgttgagat cgacgacctg
     1021 caagcggagc gcgccggccg tgcacatacc ctcacgcggc accatgtggg cgagccgcgt
     1081 gatgtcgagg tgacccttgg cgtcggtgcc gaagcagagc gtgtcgccga aggggatcac
     1141 cgcgaacacg gtgagcgccg gaaagaaaga gatgaacggc gcgaggccgt gcaggaactt
     1201 gtcggcgttc ggcgggatga agtcctcttt ccagagcgtc ttcaagccgt cggccacgaa
     1261 ggcgtgcggc agaccgagca gccggagacc cacccgtggc tcattgcgga tcgcgaacgc
     1321 cgcgtaaccg gcgccgaaca ggatcgagaa aatcaggagg ccggcaccgc caccgtaagc
     1381 gacgtcgcga aagacgaggc cctgctcggt gccgctgaac gcggaagcga gcacgatcgc
     1441 gagcacgtgc gcgccgaagc cgatgtagac gatttggcgc ggcggaaagc ccttgagcca
     1501 gagatcgagg ctcgagcggg cgccgcgatt cacgacgagt cccgagatga tcgcgaacgt
     1561 cgcccaggtc atgaagatgc cgaggtgact gaagacgcag gccgccgtgg cgcgtgcctc
     1621 tccggtcggc ggctctccgg cacccgcgag gtagccgaag gcgagaaacg caacgagcgc
     1681 tgccacgccg agc
//
LOCUS       DATIML010000939         1771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3949965, whole genome shotgun sequence.
ACCESSION   DATIML010000939 DATIML010000000
VERSION     DATIML010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3949965"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            536..1213
                     /locus_tag="VLJ38_16220"
     CDS             536..1213
                     /locus_tag="VLJ38_16220"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSU41126.1"
                     /translation="MTRHVPLHVTLGLVPGLPSLRGKAAFRVVREALAAARRGGVRVI
                     HYSIQSNHVHLLVEAESAQGLARGMQALSIRLAKQLNRSFERKGRVFADRFHARALKT
                     PLEVRRALAYVLNNFRRHADGKGPRLPLSFRDPMSSAHWFDGWDPEWVHAAPDKRALL
                     DPAPRLESGVVAARSFLLRSGWRRHGLLQPFDVSDAERGLNARRAAGPARPRTAAPIS
                     RRARSPD"
     gene            complement(1531..>1771)
                     /locus_tag="VLJ38_16225"
     CDS             complement(1531..>1771)
                     /locus_tag="VLJ38_16225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41127.1"
                     /translation="PDLATVGLDPLGRAWAAGRGRVWSRRNGGEWSCVWEHADWQPPF
                     VGIMVEVGSVLAVTVDGAMLECRATPAGRPSFTPV"
BASE COUNT          277 a          571 c          658 g          265 t
ORIGIN      
        1 cggcgcgtga acggcggggc acggagctgg ggaacggcgc gtgaacggcg gggcacggag
       61 ctggggaacg gcgcgtgaac ggcggggcac ggcgcgtgaa cggtgcggca ggcagagctg
      121 ggcaacgggc gcgcgaacgg cgtggcacgc agagagacgc tggtggcgct cgtctcgcaa
      181 ctggacgccc ctcggcaccg tcgtgtcagc cccgagcgca cactaaccgt agccgactcg
      241 tgaacggcaa agcgacaact accttgacgc tcaccgtcgg ttcgagctgt caacaatgta
      301 tccggtttgt acccccccgg acccaccgga gaccctataa gcccttgtgt cctatagcga
      361 tatatgccat attcaagatg caatcatgcc ggctctcgac aggactgtgc gcgccactcg
      421 cgaggtcggc cagcaggggc aggtcgcgtt gcgattccgc acgtggggcg gagctcggca
      481 aggggcgggg cggccgcgct cttcacggcg tgtttcgcac ctcacacggg cgcgcgtgac
      541 gcgacacgtg ccgctgcacg tgacgttggg gctcgtgccg ggactgccga gtttgcgggg
      601 caaggcggcc tttcgagtgg tgcgtgaggc gctcgcggcg gcgcgacgcg ggggagtgcg
      661 cgtaatccat tattcgattc agtccaatca cgtgcatctg ctggtcgagg cggagagtgc
      721 gcaggggctc gcacgaggca tgcaggcgct ttcgatccgt ctcgccaagc agctcaatcg
      781 gtctttcgag cgaaagggac gagtcttcgc ggaccgcttt cacgctcgcg cgctcaagac
      841 gccgctcgag gttcgacgcg cgctcgcgta cgtgctcaac aattttcgcc ggcacgcgga
      901 tggcaaaggg ccgcggctgc cgctctcgtt ccgcgacccc atgagctctg cgcactggtt
      961 cgacggctgg gatccggagt gggttcacgc ggcgcccgat aagcgtgcgt tgctcgatcc
     1021 tgcgcccagg ctcgagtcgg gggtcgtcgc cgcacgttcg tttctgctgc ggagcggctg
     1081 gcgtcggcac gggctgctgc agccgttcga cgtttcggac gcggaacgcg gactcaacgc
     1141 gcgccgagcc gctggccccg cccgccctcg gacggccgct ccgataagcc gtcgagcgcg
     1201 ctcgccggac tgaacgaaga aagcgcgatg cttgaagcgc gcacgcgcga cgaagcgcac
     1261 ggtgcgccct catgcggccg tgccgtacag tccgaaccgc agcgcaccag cttgtcgccg
     1321 gcggcgtccc tcgccgaggt cgcgccgcgg cgggctacca ccccctgagc gcgcgaagcg
     1381 cgcgatttgg gggtggtcgg cggcgcgcag gccgaaggcc gagcaccgac gggtcggggg
     1441 cacctccaac agtcgctaac gccctttgca cctgacgtaa ggcgacgcga agacgtaagg
     1501 cgacgtgcgg cgcgttcggt gcgcttgggt ttatacgggg gtgaaggagg ggcggccggc
     1561 gggggtggcg cggcattcga gcatggcgcc gtcgacggtg acggcgagga cggagccgac
     1621 ttcgaccatg atgccgacga aagggggctg ccagtcggcg tgttcccaga cgcacgacca
     1681 ttcgccgccg ttgcggcggg accagacacg gccgcggcct gccgcccacg cgcggccgag
     1741 cgggtcgagg ccgacggttg cgaggtcggg g
//
LOCUS       DATIML010000940         2472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2220327, whole genome shotgun sequence.
ACCESSION   DATIML010000940 DATIML010000000
VERSION     DATIML010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2220327"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..519)
                     /locus_tag="VLJ38_16230"
     CDS             complement(97..519)
                     /locus_tag="VLJ38_16230"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSU41128.1"
                     /translation="MAGMASSNGDEEIVGINVTPLVDVVLVLLVVLMVTAGYIASRAI
                     PVDLPQAATGETVPQTLALSIDARGVLYLDGRPASEPELHAHVAAAKRARPDIRAVIA
                     ADGGVQHRRVVRLIDLLRQEHVTEFALDVRPEDLAAGR"
     gene            complement(523..1164)
                     /locus_tag="VLJ38_16235"
     CDS             complement(523..1164)
                     /locus_tag="VLJ38_16235"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSU41129.1"
                     /translation="MLIERISRITDYGSHWILWLLVAASVVALAIVIERAVLFWSSRD
                     NHTRLRREIRALLATRDVAGARRRLDVSPSFEAVIARAGLDADGAASAQERILAEREV
                     ARLKLERNLGFLGTLGSNAPFVGLLGTVIGVVRAFHRLSEATGQVSAGLMAEIGEALV
                     ATAVGILVALPAIAFFNLFHRAIKARLGQSDALGHEVLAYLKAERRVSPADAE"
     gene            complement(1200..2126)
                     /locus_tag="VLJ38_16240"
     CDS             complement(1200..2126)
                     /locus_tag="VLJ38_16240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41130.1"
                     /translation="MAHRYCAAPRGSARSNVLLSALYALSVVTGCDEPISPLELIDKT
                     RVLAAKVEVAGDATRAAPLPGEDVLVRWLVAAPDPNGAFAYRLSACIAKDAATDLPSC
                     QGDALASAESLEPATEAPSIAFSAPATASGNERLAVLGGVCPAGQALADAATLSCSDG
                     TTARAVSLDFSMDDGNHPNANPALTDVLVDGTSLTADAGGIDCATLPAFAAGKHRLTV
                     ELGPNSRDPLEPANSGDPTRESLLLSYFVTAGELDHAFTAIDAGSTATGGSVIWTAAS
                     HGGEPSFVRLYFVVRDGRGGSDFTERRVCVTP"
     gene            complement(2126..>2472)
                     /locus_tag="VLJ38_16245"
     CDS             complement(2126..>2472)
                     /locus_tag="VLJ38_16245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41131.1"
                     /translation="RKLGKGWELGARFRLVSGNPYTPVSGSVFDARTGIYVPTYGAVN
                     SQRNALFQELDVRVEKGFKLGAFTLAIYLDLQNAYNAKNPQGYTYNYDYSKREQANGL
                     PLFPNLGLRGEW"
BASE COUNT          417 a          838 c          835 g          382 t
ORIGIN      
        1 gccaggccaa gcgatgcgta ggcaaagccg tgcgcgagca agctcagcga cgcggctgcg
       61 gcaagaccca cgaaaggatg ctcggtcatc gaagcctcag cgcccggccg cgagatcctc
      121 gggccgaacg tcgagcgcga attcggtaac atgttcttgc ctcaagaggt cgatcagacg
      181 cacgacgcgc cggtgctgga cgccgccgtc ggccgcgatg acggcacgaa tatcgggccg
      241 cgcgcgcttg gccgccgcaa cgtgcgcgtg gagctcgggc tcgctcgcgg gccggccgtc
      301 gaggtagagg acgccccgcg cgtcgatcga cagcgcgagc gtttgcggca cggtttcgcc
      361 cgtggcggcc tgcggcaaat cgacgggaat cgcgcgcgaa gcgatataac cggccgtcac
      421 catcaaaacg accaggagca cgagcacgac gtccacgagc ggcgtcacgt tgatgccgac
      481 gatttcctcg tcgccgttcg agcttgccat gcccgccatg actcactccg cgtccgcggg
      541 cgacacccgc cgttcggctt tgaggtacgc gagcacttcg tgcccgagcg cgtcgctctg
      601 cccgaggcgc gccttgatgg cgcggtgaaa caagttgaaa aacgcgatcg ccggcagcgc
      661 gaccaaaatc ccgacggcgg tcgccacgag cgcctcgccg atttcggcca tgagtccagc
      721 cgagacctgg cccgtcgcct cactcaagcg gtgaaacgcc cgcacgactc cgatcaccgt
      781 gccgagcagc cccacgaacg gcgcgttcga gccgagcgtc cccaagaacc cgaggtttcg
      841 ctcgagcttg agccgtgcca cttcgcgctc cgccaagatc cgctcttgtg cgctcgccgc
      901 gccgtccgcg tcgagccccg cgcgcgcgat cacggcctcg aaactcggcg acacatcgag
      961 ccggcggcgc gcgcccgcca cgtcacgcgt ggcgagcaaa gcgcgtatct cccgtctgag
     1021 ccgcgtgtga ttgtcgcgcg aggaccagaa caggacggcg cgctcgatga cgatggcgag
     1081 cgccacgacg gacgccgcga cgagcagcca caggatccaa tgcgagccgt agtcggtaat
     1141 gcgtgaaatg cgttcgatga gcatgttggt acctcgggta gtgctgtcgc acggtagtgt
     1201 cagggagtga cgcacacgcg ccgctcggtg aaatcggagc cgccgcggcc atcgcggacg
     1261 acgaagtaga ggcggacgaa cgagggctcg ccgccgtgcg acgctgccgt ccagatcacg
     1321 ctgccgcccg tggcggtcga gcccgcgtcg atggcggtga aagcgtggtc gagctcgccg
     1381 gccgtgacga agtaggacaa gagcaggctc tcacgcgtgg gatcgccgct gttcgcaggt
     1441 tccagcgggt cccgcgagtt cggaccgagc tcgaccgtca agcgatgctt gcctgcggcg
     1501 aacgccggta acgtcgcaca gtcgatgccg cccgcatcgg ccgtgagcga cgtgccgtcc
     1561 acgagcacgt cggtgagggc gggatttgcg ttcgggtgat tgccgtcgtc catcgagaaa
     1621 tcgaggctga cggctcgagc cgtcgtgccg tcgctgcatg aaagtgtcgc tgcgtcggcg
     1681 agcgcctggc ctgccgggca cacgccgccg agcaccgcga gtcgctcgtt gccgcttgcc
     1741 gtcgccggtg cgctgaacgc gatgctcggc gcttccgtcg cgggctcgag gctttcggca
     1801 ctcgcgagcg cgtcgccttg gcagctcggc aggtccgtgg ctgcatcctt cgcgatacag
     1861 gccgacagtc gatacgcaaa agccccattc ggatccggcg cggcgacgag ccagcgcacg
     1921 agcacgtcct cacccggcag cggcgcggct cgcgtggcat cgcccgccac ttccaccttg
     1981 gccgcgagca cgcgcgtctt gtcgatgagc tcgagcggcg agatgggctc gtcgcagccc
     2041 gtcacgaccg agagcgcgta gagcgccgaa agcagcacgt tcgagcgggc gctgccacgt
     2101 ggagccgcgc aatatcggtg tgccatcacc attcacctcg aagacccaag ttcgggaaga
     2161 gcggcagtcc gttcgcctgc tcccgcttgg agtagtcgta gttgtacgtg taaccttgcg
     2221 ggttcttcgc gttgtaggcg ttctgcaggt cgaggtagat cgcgagcgtg aacgcgccga
     2281 gcttgaaacc cttctcgaca cgcacgtcga gctcctgaaa gagcgcgttc cgttggctgt
     2341 tcacggctcc gtacgtcggc acgtagatgc cggtgcgtgc gtcgaagaca ctgccgctca
     2401 ccggcgtgta cgggttgccg ctcacgagcc gaaagcgcgc gccgagctcc cagcccttac
     2461 cgagcttgcg gc
//
LOCUS       DATIML010000941         3251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1360559, whole genome shotgun sequence.
ACCESSION   DATIML010000941 DATIML010000000
VERSION     DATIML010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3251
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1360559"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VLJ38_16250"
     CDS             <1..345
                     /locus_tag="VLJ38_16250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSU41132.1"
                     /translation="GQCGACTVLLDGRRVNACLVLAVMAQNKPITTIEGLAHGEALHP
                     LQAAFVKEDALQCGYCTPGQIMSAAGLLREKRAQTDDDVRELMSGNICRCGAYVNIVR
                     AIRSVQESGAPT"
     gene            342..1325
                     /locus_tag="VLJ38_16255"
     CDS             342..1325
                     /locus_tag="VLJ38_16255"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSU41133.1"
                     /translation="MKSFDYLPARKLEEAVARGELRTSRFIAGGTLLIDLMRLDVEQP
                     DLVVDLNGVLSSDIAWDEAGLTLGALARNTDVAYDDRVRREFPVLSEAILAGAAPQIR
                     NLATTGGNLLQRTRCAYFRDTAVPDCNKRKPGSGCAALAGYSRMHAILGVSDRCIAAH
                     PSDMAVALLALDAAVHTRRAAGERQIPLSALHTLPGTTPDVETVLEPGEVITRVSVPR
                     SPRGRRSTYLKVRDRASFAFALSSAAVALEVEQGTIRSARVALGGVGAKPWRAAATEA
                     ALVGRPATNATYRAAAKLATDGAKTTADNAFKVPLTERVVARALERAGALV"
     gene            1322..>3251
                     /locus_tag="VLJ38_16260"
     CDS             1322..>3251
                     /locus_tag="VLJ38_16260"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSU41134.1"
                     /translation="MTSVGQGIDRADARSKVRGEAQYSADLPVAGLVHAFVVTSAIGH
                     GRVTAIDASGARNAAGVLAVITPDNAPRVPGATKKKVSFDRILQVVQDAEVRYADQPI
                     AVVVADTPERARAAGEALLVSYAPSPLAVSLAQNEAAGRKPQKAGPRAEPDSSRGDFA
                     AGLAAAALKVEQTYTTSIQHHHPMEMHGTIAVWQGNDALTLYDATQGVFPCRERLAGA
                     FDLPLEKVRVISHYVGGGFGCKGSAWSHVALAALAARVVNRPVKLVLTRQQMCSLVGY
                     RPRTIQHLALGAAKDGTLRAMRHDVVSETSRFDEFSEPSGLVTRMLYSCPNVTTTHRV
                     VELDVPTPTFTRAPGEASGNFALEVALDELAYELGLDPLELRLKNYAERDEDEDKPWS
                     SKSLRECYRRAAEQFGWKKRRPAPGSQREQKLLVGWGMATAAYPARQSAAAARVKRER
                     DGNFVVQAGSQDIGTGTYTILAQIAADALGVPVERVRVEIGDTALPETPVSGGSQTAS
                     STGSAVKRAAEALKREIDALSPADRAKSAELVAELKTEEKADRKRFSSYGFGAQFVEV
                     KVDPDFRTVRVTRAVAAFAAGKILNPKTARSQFLGGMVWGIGLALLEHSRRDERSGRI
                     VTRDLADYHVPVNADVPEL"
BASE COUNT          542 a         1145 c         1099 g          465 t
ORIGIN      
        1 ggccagtgcg gcgcgtgcac ggtcttgctc gacggccggc gcgtgaacgc ctgcctcgtg
       61 ctggcggtga tggcgcaaaa taagcctatt acgacgatcg agggcctcgc gcacggcgag
      121 gcgctgcatc cgttgcaagc cgcgttcgtc aaggaggacg cgctgcaatg tggttactgc
      181 acgccggggc aaatcatgag cgccgcgggc ctgctgcgcg aaaagcgcgc tcagaccgat
      241 gacgacgtac gcgagctcat gagcggcaac atttgtcgct gcggcgcgta cgtcaacatc
      301 gtgcgcgcca ttcgctccgt gcaggagagc ggagcgccca catgaagtcg ttcgactact
      361 tgccggcacg caagctcgaa gaagcggtag cacgcggcga gcttcgcacg agtcgcttca
      421 tcgcgggcgg caccttgctg atagacctca tgcgcctcga cgtggagcag ccggacctcg
      481 tggtcgatct gaacggcgtg ctctcgtccg acatcgcgtg ggacgaagcg gggctcacgc
      541 tcggcgcgct cgcgcggaat acggacgtgg cgtacgacga ccgcgtgagg cgagaatttc
      601 cggtcctcag cgaggcgatc ctcgccggag ccgcgccgca gatccgaaat ctggcgacca
      661 cgggcggtaa cctgctgcag cgcacgcgct gcgcatactt tcgcgatacc gccgtacccg
      721 actgcaacaa gcgcaagccc ggcagcgggt gcgccgcgct cgcgggctat tcgcgcatgc
      781 acgcgatttt gggcgtgagc gaccgctgca tcgccgcgca cccctccgac atggccgtcg
      841 cgctgctcgc gctcgacgcc gccgttcaca cgcgccgagc ggccggcgaa cgccagatcc
      901 cactcagcgc cctacacacg ctgcccggca cgacgcccga cgtcgagacg gtgctcgaac
      961 ccggtgaagt catcacgcgc gtcagcgtgc cgcgctcgcc gcgcggacgt cgctcgacgt
     1021 atctcaaggt tcgcgaccgc gcctcgttcg cctttgcgct cagctccgcc gccgtcgcgc
     1081 tcgaggtcga gcagggcacg attcgttcgg cgcgcgtggc gctcggtgga gtcggggcga
     1141 agccctggcg cgccgccgcc acggaggccg cgctcgtcgg ccggcctgcc acgaacgcga
     1201 cgtatcgcgc ggccgcaaag ctcgcgacgg acggcgcgaa aacgactgcc gacaacgcct
     1261 tcaaagtgcc gctcaccgaa cgcgtggtcg cgcgcgcgct cgagcgggcg ggagcgctcg
     1321 tttgacgagc gtcggacaag gcatcgaccg cgccgatgcg cgctccaagg tacgcggcga
     1381 ggcgcaatac agcgccgatc tacccgtcgc cgggctcgtg cacgccttcg tggtcacgag
     1441 cgccatcgga cacggccggg tgacggccat cgacgcgagc ggggcgcgaa acgctgcggg
     1501 cgtcctcgcc gtcatcacgc cggacaacgc gccgcgcgtc cctggagcga ccaagaagaa
     1561 ggtatcgttc gatcgcattc tgcaagtggt gcaagacgcc gaggtgcgtt acgccgacca
     1621 gccgatcgcc gtcgtcgtcg ccgacacgcc cgaacgtgcc cgcgcggcgg gcgaagcgct
     1681 gctcgtgagc tacgccccct cgcccctcgc ggtgtccctc gcgcagaacg aagccgccgg
     1741 ccgcaaaccc cagaaggccg gaccgcgcgc cgaacccgat tcctcgcgcg gggacttcgc
     1801 cgcggggctc gcggccgcgg ccctgaaggt cgagcaaacg tacacgacga gcattcaaca
     1861 tcaccacccg atggagatgc acggcacgat cgccgtgtgg caaggcaacg acgcgctgac
     1921 gctttacgac gcgacgcagg gcgtgtttcc ttgtcgtgag cgcctcgcgg gcgcgttcga
     1981 tttgccgctc gagaaggtgc gcgtcatctc gcactacgtg ggcggcgggt tcggctgcaa
     2041 gggttcggca tggtcgcacg tggcgctcgc ggccctcgcc gcccgcgtcg tcaaccgccc
     2101 ggtgaagctc gtgctcacgc gccagcagat gtgctcgctc gtcggttatc ggccgcgcac
     2161 gatccaacac ctcgcgctcg gagcggccaa ggacggcacg ttgcgggcga tgcgccacga
     2221 cgtcgtgtcg gagacgtcgc gtttcgacga attttccgag ccgtcagggc tcgtgacgcg
     2281 catgctctac tcgtgcccga acgtcacgac gacgcaccgc gtggtcgagc tcgacgtgcc
     2341 caccccgacg ttcacgcgcg ctcccggcga agccagcggt aacttcgccc tcgaggtcgc
     2401 gctcgacgag cttgcgtacg aactcggcct cgatccgctc gagctgcggc taaagaacta
     2461 cgccgagcgc gacgaggacg aagacaagcc ttggtcgagt aagtcgctgc gcgagtgtta
     2521 ccgacgcgcg gcggagcagt tcggctggaa gaagcgacgc cccgctcccg gctcgcagcg
     2581 cgagcaaaag ctgctcgtcg gttggggcat ggcgaccgcc gcctatccag cgcggcaaag
     2641 cgccgccgcc gcgcgcgtca aacgcgagcg cgacggtaac ttcgtggtgc aagcgggctc
     2701 gcaagacatc ggcacgggga cgtacaccat cctggcgcag atcgcggccg atgcgctcgg
     2761 cgtccccgtc gagcgcgtcc gcgtcgaaat cggcgacacg gcgttgcccg aaacgcccgt
     2821 ctcgggcggc tcgcagacgg cgtcgagcac gggctccgcc gtcaagcgtg ccgccgaggc
     2881 gctcaaacga gaaatcgacg cgctctcgcc cgccgaccgc gccaagagcg ccgagctcgt
     2941 cgccgagctc aagacggaag aaaaagccga tcgcaagcgc ttctcgagct acggcttcgg
     3001 cgcgcagttc gtggaagtga aagtggaccc ggactttcgg accgtacgcg tcacgcgcgc
     3061 cgtggctgcc ttcgccgccg gtaagatcct gaaccccaag acggcgcgca gccaattctt
     3121 gggcggcatg gtgtggggca tcggcctcgc gctcctcgag catagccggc gcgacgagcg
     3181 cagcggccgc atcgtcacgc gcgatctcgc cgactatcac gtgcccgtga acgcggacgt
     3241 gcccgagctc g
//
LOCUS       DATIML010000942         4315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1360637, whole genome shotgun sequence.
ACCESSION   DATIML010000942 DATIML010000000
VERSION     DATIML010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4315
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1360637"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..794)
                     /locus_tag="VLJ38_16265"
     CDS             complement(<1..794)
                     /locus_tag="VLJ38_16265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41135.1"
                     /translation="MLVENIEHDDVDAFDTFTLGVRVDVGRSTEARSLLIECPALELG
                     ELRRLRPGGRGGEEDGQERAQGDREPRAYWPSGARAARDSLRAVQTYPARTSVALASA
                     ALGAMALGLVLREATTMAMGGALLIGLGIARLATQLDVAGIRAAGFEMAWRGEDRRAR
                     VARGEELELVAELRNRDARGARFSGLRATHSPELSVRLEQTAGEVPGGARLLVRLFVR
                     GERVGRHAIHGLSLELEGGPGLFEVPLTFANPFGVLVLPGAARELL"
     gene            771..2381
                     /locus_tag="VLJ38_16270"
     CDS             771..2381
                     /locus_tag="VLJ38_16270"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSU41136.1"
                     /translation="MLDVFDEHDPVPDFANVFHSMTRKSVVERELLFRQGERYVGARV
                     DESARNLRLLTQQLSLVIVVPLRGSAPDRVRVLVIVRDIWSLRLNNDFSFTGHGLQTL
                     HLQPIEQNLAGLHTVLGVDYTLQPDTYSFGALVSQNRILGTSLYVLASGASIYNRASG
                     AAEGSRGNFVFGDPLRQTRQRWAYNVSVYWDDEMSRHLLASGHTATYDAPGTPENDAI
                     PIEYRARRYIGGYEAVRSFGLVSKYDLYFGIELDRRENQHTTRANDSPVAEQEFLTTW
                     VPLSDTRVSPFVQLRTHVEHYLHTANLETLALAEDYRLGPEALLRVYPASSKFASTRN
                     LLGVIAGASMTLALGDGLLRGVAQNRVEYEFEGRHDADVLGELRLATPTIGFGRFVFD
                     GLFRDRYENYLNRYFELGGDTRLRGYPHAGYEHSAKGPVAVALNAEFRTRSLDLFSVH
                     SGLAAFFDAGDAAEDFGHLYLRQSAGIGLRFLIPELDRVVLRADWAFPFEPAPGYTTF
                     PGTFYLTYEQAMSMPGLDTPTVTRPDLH"
     gene            2438..3307
                     /locus_tag="VLJ38_16275"
     CDS             2438..3307
                     /locus_tag="VLJ38_16275"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU41137.1"
                     /translation="MRVLVTGAAGKLGSQTVAALARAGHEVRATDMRFRSDLAVPLHP
                     ANLLDEHALYPLLDGCEALVHLGNHPNRFAGPSPQRLLAENAAMNANAVYAAIDRGVQ
                     QIVFASSIQVLIPSEEIGAAPYYLPYLPLDANAPANPGLNPYALSKQLAEELLRVAAR
                     TKPELAVTVLRYPMLFGDWFRARLAANGGRVPPDHVHLGEATAHLSFEDAARLILHVL
                     ERPRPGYRQYFPAQTLEFVNVPVAALIERYYRTVPCRQPRERIERLVDIGDLERELGF
                     VPAERARVELVEA"
     gene            3542..4267
                     /locus_tag="VLJ38_16280"
     CDS             3542..4267
                     /locus_tag="VLJ38_16280"
                     /inference="COORDINATES: protein motif:HMM:NF024260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSU41138.1"
                     /translation="MDVLTDVLETLRARGACYARLEAQSPFGVALPSSTHAAFHLVLE
                     GECVLTMDGHADVELTGGDLVAVPHGLPHTLADHPSTKPEHLRDLLGQAKRSGPASLV
                     IGGTGARTTLVCGKIDFEDPVGHPLLAALPPRILLRGGSNALVEWLDPTLRFIASEAG
                     SKRPGSQTVVSRLADVLFIQIVRAHLAASSPETSGWLGALGDPQIGAVLAALRLREDV
                     PTLLYAAAASVLACVYDAAGDAG"
BASE COUNT          660 a         1582 c         1377 g          696 t
ORIGIN      
        1 tgcaagagct cgcgcgccgc gccgggcagc acgagcacgc cgaacgggtt ggcgaacgtg
       61 agtggcacct cgaagagccc ggggccgccc tcgagctcga gtgacaggcc gtggatcgcg
      121 tgccggccca cgcgttcgcc acgcacgaag agccgcacga gcaggcgcgc gccgcccggc
      181 acttcacccg ccgtttgctc gagccgcacg ctaagctcgg gcgaatgcgt cgcgcgcaag
      241 ccgctgaaac gggcgcctcg ggcgtcccga tttcggagct ctgccacgag ctcgagctcc
      301 tcgccgcggg cgacgcgcgc gcggcgatcc tcgccgcgcc acgccatctc gaaaccggcc
      361 gcgcggatgc cggccacatc gagctgcgtc gccagccgcg cgatgccgag gccgatgagc
      421 agcgcgccgc ccatggccat cgtcgtcgcc tcgcgcaaga ccaagccgag cgccatggcc
      481 ccgagcgcgg cgctcgcgag ggccacgctg gtgcgcgccg ggtaagtctg cacggcacgc
      541 aagctatcac gcgccgcgcg cgccccgctc ggccaatacg cgcggggctc tcggtcgccc
      601 tgcgcgcgct cttggccgtc ctcctctccg ccgcggccgc cggggcggag ccgccgaagc
      661 tcaccgagtt cgagcgccgg acactcgatg agcaagctgc gcgcctcggt gctccggccg
      721 acatcgactc gcaccccgag ggtaaacgta tcgaacgcgt cgacgtcgtc gtgctcgatg
      781 ttttcgacga gcacgacccg gtgcccgact tcgcgaacgt cttccacagc atgacgcgaa
      841 aatcggtcgt agaacgcgag ctcttgttcc gccaaggcga gcgctacgtc ggcgcgcgcg
      901 tggacgaatc ggcgcgtaac ctgcgactac tcacgcagca gctctcgctc gtcatcgtcg
      961 tgccgctgcg tgggagcgcg ccggaccgcg tgcgcgtgct cgtgatcgtg cgcgacatct
     1021 ggagcctgcg gctcaacaac gacttcagct tcaccgggca cggcctgcag acgctgcacc
     1081 tccagcccat cgagcagaac ctcgcgggcc tgcacaccgt gctcggcgtc gactacacgc
     1141 ttcagcccga cacgtactcg ttcggcgcgc tcgtcagcca aaatcgcatc ctcggcacga
     1201 gcctctacgt gctcgcgagc ggcgcgagca tctacaaccg cgcgagcggc gcggccgaag
     1261 gttcgcgagg caatttcgtc ttcggcgacc cgctgcgcca aacacgccag cgctgggcct
     1321 acaacgtgag cgtctactgg gacgacgaga tgtcgcgcca cctgctcgcg agcggtcata
     1381 cggcgacgta cgacgccccg gggacgccgg agaacgacgc catccccatc gaatatcgcg
     1441 cgcgccgcta catcggcggc tacgaagcgg tgcgctcgtt cggcctcgtc agcaagtacg
     1501 atctctactt cggcatcgag ctcgaccggc gcgagaacca gcacacaacg cgcgcgaacg
     1561 acagtcccgt ggccgaacag gagttcctca cgacctgggt gccgctcagc gacacgcgcg
     1621 tgagcccgtt cgtgcagctc cgcacgcacg tcgagcacta cctacacacc gccaatctcg
     1681 agacgctcgc tctggccgag gactatcgcc tcggtccgga agcgctcttg cgcgtctatc
     1741 ccgcgagctc gaagttcgca tcgacgcgca atctgctcgg cgtcatcgcc ggcgcgtcga
     1801 tgaccttggc gctcggcgac ggtctgctgc gtggcgtcgc ccaaaaccgc gtcgagtacg
     1861 agttcgaggg tcgccacgac gccgacgtgc tcggcgagct ccgcctcgcg acgccgacga
     1921 tcggcttcgg tcgcttcgtg ttcgacgggc tcttccgtga tcgttacgaa aactacctca
     1981 atcggtattt cgaactcggg ggcgacacgc gcctgcgcgg ctacccgcac gccggctacg
     2041 agcacagcgc gaagggaccg gtggccgtgg cgctcaacgc ggagtttcgc acccgctccc
     2101 tcgatctctt cagcgtgcac tcgggtttgg cagctttctt cgacgcgggc gacgccgccg
     2161 aggactttgg acacttgtac ctgcgtcagt ccgccggtat cggtctgcgc tttctcatcc
     2221 ccgagctcga tcgcgtcgtc ctgcgagcag actgggcctt cccgttcgag ccggcgccag
     2281 gctacaccac cttcccgggc acgttctacc tcacctacga acaggcgatg agcatgccgg
     2341 gactcgatac cccgacggtg acgcggccgg atctccactg aggcggccgc gcgcgacgga
     2401 gatccgcgcg agcggctatg ctactgacgc gggctcgatg cgcgtcttgg tcaccggtgc
     2461 tgccggtaag ctcggctctc aaacggtggc ggcgctcgcc cgagcagggc acgaagtgcg
     2521 ggcgaccgac atgcgcttcc gcagcgacct cgcggtgccg ctccatcccg cgaatttgct
     2581 cgacgagcat gcgctctacc cgctgctcga cggctgcgaa gccctcgttc atctcggcaa
     2641 ccaccccaat cgcttcgccg gtccctcgcc gcaacgcttg ctcgccgaaa atgcggccat
     2701 gaacgcgaac gccgtctacg ccgccatcga ccggggcgtg cagcagatcg tcttcgcgag
     2761 ctcgattcag gtgctgatcc cgagcgagga gatcggcgcg gcgccctatt acttgcccta
     2821 cctcccgctc gacgcgaacg cgccggcgaa tcccggactc aatccttacg cgctcagcaa
     2881 acagctcgcg gaggagctct tgcgggtcgc cgcccgcacg aagcccgagc tcgccgtcac
     2941 cgtgctgcgc tacccgatgc tgttcgggga ttggtttcgt gcgcggctcg cggcgaacgg
     3001 cgggcgcgtg ccgcccgacc acgtccacct cggcgaagcg acggcgcacc tctcgttcga
     3061 ggacgccgcg cggctcatcc tgcacgtgct cgaacgaccc cgtcccgggt atcgccagta
     3121 ttttccggcg cagacgctcg agttcgtcaa cgtcccggta gcggcgctga tcgagcgcta
     3181 ttaccggacg gttccatgcc ggcagccgcg cgagcgcatc gagcggctcg tcgacatcgg
     3241 cgacctggag cgcgagctcg gcttcgtgcc ggccgagcgc gcccgcgtcg agctcgtcga
     3301 agcttgagcc gcccgagttg tcggccgtgg cggtgcgtac aaccgcgcga ttcccatcgt
     3361 gaatgtcgcc ttcgcgcgta catttcgact ctcgctgtcc aaagacgaga cacctggccg
     3421 gacaccgctc gtgatggcca gttccaatag tgactggacg gtcagacatg tctccgctaa
     3481 tttcagagcc gttcgtatct tccgggaggc aggctgtcgg cccccgggtg ggatttcccg
     3541 cgtggacgtg ctcaccgatg tgctcgaaac gctgcgtgct cgcggcgctt gttacgcgcg
     3601 cctcgaagcg cagtcgccgt tcggagtagc gctacctagc tcgacgcatg cggcgtttca
     3661 cctcgtgctc gagggcgagt gcgtgctcac gatggacggc cacgccgacg tcgagctcac
     3721 gggcggcgat ctcgtcgctg tgccgcacgg cttgccgcac accctcgccg accacccgag
     3781 cacgaaaccc gagcacctgc gcgacctgct cggccaggcc aagcgttccg gccccgcgtc
     3841 gctcgtcatc ggcgggaccg gcgcacggac aacgctcgtc tgcggtaaaa tcgacttcga
     3901 ggatcccgtg ggtcacccgc tgctcgcggc gttgccacct cggatcctgc tgcgcggcgg
     3961 ttcgaatgcg ctcgtcgagt ggctcgatcc gacgctgcgt ttcatcgcct cggaggcggg
     4021 ctccaagcgc cccgggtcgc agaccgtcgt gagccggctc gccgacgtac tcttcatcca
     4081 gatcgtccga gcacatctgg cggcgtcgtc accggagacg agcggctggc tcggtgccct
     4141 cggcgacccg caaatcggcg ccgtgctcgc cgccctgcgc ctgcgcgagg acgtccccac
     4201 cctgctctac gccgcggccg cctcggtgct cgcgtgcgtg tatgacgcgg cgggggatgc
     4261 gggttagcac ggcggtcgga ctcgacgccg cctacacatt cgcccggcta tccct
//
LOCUS       DATIML010000943         1629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_491531, whole genome shotgun sequence.
ACCESSION   DATIML010000943 DATIML010000000
VERSION     DATIML010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491531"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..>1629
                     /locus_tag="VLJ38_16285"
     CDS             69..>1629
                     /locus_tag="VLJ38_16285"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU41139.1"
                     /translation="MLIPLLPELGRILGPEPPVAELPAREAQARLHRVFRAFLRAVAT
                     KHEPLVLFLDDLQWTDGSTPQLLVQLLSDGDLRHVLVLGAYRDNEVGENHLLSAALRE
                     LAHRRPEGLHELRLAPLGEEALEHVVRRTLRTSGERARPLARLLFQKTGGNPFFTSEL
                     LQRLQRQGDIRFDRAARAFTYDEAALERVAFSDNVVDLMIERLRELPPDALELVKLAA
                     CLGNEFELALLARVAKKPRQAVASSLWQAIERRLLLPRGDEYRLLRGEHADEGSELGA
                     TVRYEFPHDRVLQAAYSLLEPGERVRVHLAIGRLLRDAIPPEEHAARVFEFVDHLNLG
                     RSRLAPLEEREELASFNLLAAQRARRSAAYATAVAYLDASESALADEEWRKHPTRRFE
                     LSRMRVECRFLAGQVERASELCNELFEQALDRVAKASVFCLKAQIEEQQSRLGESVAT
                     ILGGLCELGLELPQEPALVEKAIGEGIGKLLGHLERVPIEDLARLPVLSDAERIAQTE
                     LHFQLIPPASQM"
BASE COUNT          253 a          592 c          537 g          247 t
ORIGIN      
        1 cggagagcga agggcagctc ctcgccgccc gtcggaggct cgctgccgcg ctcggcgcgg
       61 aggccaacgt gctcattccg ctcctgcccg agctcgggcg cattctcgga cccgagccgc
      121 ccgtggccga gctgccggca cgcgaggctc aagcgcggct acaccgcgtg ttccgagcgt
      181 tcctgcgcgc cgtggcgacg aagcacgagc cgctcgtgct cttcctcgac gacttgcagt
      241 ggaccgacgg ctcgacgccg cagctgctcg tgcagctcct cagcgatggc gacctgcggc
      301 acgtgctcgt gctcggcgcc taccgcgaca acgaagtcgg cgaaaatcac ctgctctccg
      361 ccgcgctgcg cgagctcgcc cacagacgtc ccgaagggct ccacgagctc cgtctcgcac
      421 cgctcggcga ggaagcgctc gagcacgtcg ttcggcgcac gctccgcacg agcggtgagc
      481 gcgcgcggcc gctcgcgcgg ctcttgttcc agaagacagg cggcaatccc ttcttcacga
      541 gcgagctcct gcagcggctg cagcgccaag gcgacattcg gttcgaccgc gccgcgcgtg
      601 ctttcaccta cgacgaagcc gcgctcgagc gcgtcgcgtt cagcgacaac gtcgtggacc
      661 tgatgatcga gcggctgcga gagctccctc ccgacgccct cgagctcgtg aagctcgccg
      721 cgtgtctcgg caacgaattc gagctcgcac tactcgcgcg cgtcgccaaa aagccccggc
      781 aagccgtcgc gagctcgctc tggcaagcga tcgagcgacg cctgctcttg ccgcgcggcg
      841 acgaataccg gctgctccgc ggcgagcacg cggacgaagg gtccgagctc ggcgcgacgg
      901 tgcgctacga gtttccgcac gatcgcgtgc tccaagccgc gtactcgctg ctcgagccgg
      961 gtgagcgcgt tcgcgtgcac ctcgcgatcg gcaggctgct gcgcgacgcc atcccgcccg
     1021 aagagcacgc ggcgcgcgtc ttcgagttcg tcgatcatct caatctgggg cgctcgcgcc
     1081 tcgcgccgct cgaggagcgc gaagagctcg cgagcttcaa tctgctcgcg gcacagcgcg
     1141 ctcgccgttc ggcggcctac gcgacggccg tcgcctacct cgacgccagc gagagcgcgc
     1201 ttgcggacga agaatggcga aagcacccta cccggcgctt cgagctctcg cgcatgcgcg
     1261 tcgaatgccg gttcctcgcg ggccaggtcg agcgcgcgag cgagctctgc aacgagctgt
     1321 tcgagcaggc gctcgatcgc gtggccaagg cctccgtctt ctgcttgaag gcgcagatcg
     1381 aggagcagca aagccgactc ggcgaatcgg tcgcgaccat cctcggcggc ctgtgcgagc
     1441 tcgggctcga gttgccacag gagccggctc tcgtcgaaaa ggcgatcggc gaaggcatcg
     1501 gcaagctgct cggtcacctg gaacgtgtgc caatcgagga tctcgcgcgg ctacccgtcc
     1561 tctccgacgc cgagcgcatc gcgcagacgg agctgcactt ccagttgatt ccgcccgcga
     1621 gccagatga
//
LOCUS       DATIML010000944         1528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4243794, whole genome shotgun sequence.
ACCESSION   DATIML010000944 DATIML010000000
VERSION     DATIML010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4243794"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..>1528)
                     /locus_tag="VLJ38_16290"
     CDS             complement(164..>1528)
                     /locus_tag="VLJ38_16290"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HSU41140.1"
                     /translation="FETLRRVTQAKPVVVLTVGKSDVAEFAQSHTGNLIGSYALRASA
                     LRQAGAVVVDSTDDLVAAAALMAQHRLAPKLRAGIGILTAQAGPGLLILDQLKSRGVS
                     VPALAPRTLELIEQQLPPLTYLRNPVDTGRPGPSFARVLELLADDPEVSAVCAYALHE
                     PAALRPEAVLPEVASRLTKPLLFGTAGPRAETNETIAELRRRGLYVAASPEQLARAAL
                     VLAEDAGLQARLRRDEPRAAVQGNVRPPREPDEHAVKQLLEALGVPTPRRFMCSSHAE
                     ARAALEQLTKPVVAKILTQEVSHKTELGGVQLNIADEQALAGALAKLDAIPLTSPRRY
                     LLEEMAPPGLELIVGGKRDASFGPTLMVGLGGILAEALRDTATRLAPVSLAEASDMLG
                     ELRAAPLLAGFRNSPPLDCRALTEAIVSVGNFLVLRPEVTELEINPLRVYPRGVLALD
                     GLLR"
BASE COUNT          240 a          538 c          531 g          219 t
ORIGIN      
        1 gacctgacgg gggcggcgct gacgattcag ctggcgcaag ggttgacctc gtacccagag
       61 ctcacggccc ccggcacctg caccgccccg gcggacggca cacccgtgcc cgagtgccgg
      121 ctgtatatca aacacaactg agcggcgcgt agagccccgc ccttcagcgc agcaggccgt
      181 ccagcgccag gacaccgcgc gggtacacgc gcaacgggtt gatctcgagc tccgtcacct
      241 cggggcgcag cacgagaaag ttgccgacgc tgacgatggc ctcggtcagg gctcggcaat
      301 cgagcggcgg actgttgcga aaaccggcga gcagcggcgc cgctctgagc tcgcccagca
      361 tgtcactcgc ctccgccaag ctgacggggg ccaggcgcgt cgccgtgtct cgcagcgctt
      421 cggcgaggat gccgccgagg cccaccatca gcgtgggacc gaagctcgcg tcgcgcttgc
      481 cgccgacgat gagctcgagg cccggcggcg ccatttcttc cagcaagtac cggcggggcg
      541 acgtgagcgg aatcgcgtcg agcttggcga gcgcgccagc gagtgcctgc tcgtcggcga
      601 tgttgagctg aacgcccccg agctccgttt tgtggctgac ttcctgcgtg aggatcttgg
      661 cgactaccgg tttcgtcaat tgctcgagag cagcccgcgc ctcagcgtgc gagctgcaca
      721 tgaaacggcg gggagtcggc acgccgagcg cctcgagcag ctgtttcacg gcgtgctcgt
      781 cgggctcgcg cggggggcgc acgttcccct gcacggcggc gcgcggctcg tcacgccgca
      841 gccgagcttg caagcctgcg tcctcggcga gcaccagcgc ggcccgcgcg agttgctccg
      901 gcgatgcggc gacgtataag ccacgccgcc gcagctcggc gatcgtttcg ttcgtctccg
      961 cgcgcggtcc cgccgtgccg aacaagagcg gcttcgtgag ccggctcgcg acctcgggca
     1021 acaccgcctc ggggcggagg gcggccggct cgtgcagcgc gtacgcgcac acggcggaga
     1081 cctccggatc gtccgccaag agctccagca cccgggcgaa cgagggcccg gggcgccccg
     1141 tatcgaccgg gttccgcagg tacgtcagcg gcggaagttg ttgctcgatg agctcgagcg
     1201 tacgaggcgc gagcgccggt accgacacac cgcgcgactt cagctggtcg aggatcagga
     1261 ggcctggccc ggcttgagcg gtcaagatac cgatacctgc tcgcagcttg ggcgctaacc
     1321 gatgctgagc catcagcgcc gccgccgcca ccaagtcgtc ggtggagtcg acgacgactg
     1381 cccccgcctg ccgcagcgcg ctcgcgcgga gcgcatacga gccgatcaaa ttgccggtgt
     1441 gcgactgcgc gaactcggcg acgtccgact tgcccacggt gagcacgacg accggcttcg
     1501 cctgagtaac gcgcctgagc gtctcgaa
//
LOCUS       DATIML010000945         1736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1069956, whole genome shotgun sequence.
ACCESSION   DATIML010000945 DATIML010000000
VERSION     DATIML010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1069956"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..252
                     /locus_tag="VLJ38_16295"
     tRNA            182..252
                     /locus_tag="VLJ38_16295"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:214..216,aa:Gln,seq:ctg)
     gene            289..816
                     /locus_tag="VLJ38_16300"
     CDS             289..816
                     /locus_tag="VLJ38_16300"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HSU41141.1"
                     /translation="MRAIETGRRVYLRAPRESDRDEFVRRARASRELHRPWVYAPETS
                     GQFDAYLLRCGMESERSFLVCTRDDDAIAGVFNLSQIAHGFFESAYLGYYAFASHAGR
                     GLMAEGLELVLRHTFRELKLHRLEANIQPGNDASKRLVERAGFRYEGYSERYLKIGGR
                     WRDHERWAITREDWR"
     gene            complement(817..>1736)
                     /locus_tag="VLJ38_16305"
     CDS             complement(817..>1736)
                     /locus_tag="VLJ38_16305"
                     /inference="COORDINATES: protein motif:HMM:NF016104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000009 - alpha-1,6-mannosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0004376 - glycolipid mannosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006506 - GPI anchor biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="mannosyltransferase family protein"
                     /protein_id="HSU41142.1"
                     /translation="VVRAVTEIGIPIAIAGVGVSVLALLGTLFFLYELAARVVGEAAA
                     KRATIAFVVFPTSFFLVASYSEALFVFLSAGCLWGIYVHRDLTFAAPFAYCAALTRSV
                     GVFLVIPLAYVWWRGRREFGRPSLLAVAAPVLGLLAYMAYLWRVTREPFLFTLAYERG
                     WGRRLTDPVTTFVHGARVAHEGVHFLWAPWRVFETTSANPPFALANSLNIGFCVVLLT
                     LVVLAFVRLPLSLALYCLPLALSPLTVLGTQQPLASMPRYVLAVLPVFLVLGGLFVRR
                     TGLFVAWCAVNVAVGFVLTLEFVTWRWVA"
BASE COUNT          338 a          595 c          585 g          218 t
ORIGIN      
        1 ttcaacgcgc tccccgaata cctcggccag tacatcgctg acgtgatcgg cggcacgctc
       61 gtggcgccgt tctccgccct cgcgatcacg ttgatgtact tccgggtgaa gggaactccg
      121 gatcccgagc cggccgcgcc gatccttccc ggccccgagc ctggctagaa ttcacggccg
      181 ttgcggggtc gtctaacggt aggacgctcg gctctggacc gagtagtcta ggttcgaatc
      241 ctagccccgc agctggaaaa accccgcagg cgcggggttt tctcgtcaat gcgagcaatc
      301 gagacaggac gccgcgtcta ccttcgcgcg ccgcgcgaat ccgaccgcga cgagttcgtg
      361 cggcgcgcgc gcgccagccg cgagctccat cggccgtggg tctacgcgcc cgagacgagc
      421 ggacagttcg acgcgtatct cctgcgctgc gggatggaga gcgagcgcag ctttctcgtc
      481 tgcacacgtg acgacgacgc gatcgccggc gtcttcaacc tgagccagat cgctcacggc
      541 ttcttcgaga gcgcgtacct cggctactac gcgtttgcgt cccacgcggg acgagggctg
      601 atggccgagg ggctcgagct cgtgctgcgc cacacgttcc gtgagctgaa gctgcatcgt
      661 ctcgaggcga acatccagcc cggcaacgac gcgtcgaagc gcctcgtcga gcgcgccggc
      721 tttcgctacg agggctattc cgagcgctac ctgaagatcg gcggacgctg gcgcgaccac
      781 gagcgctggg cgatcacgcg cgaagactgg cgctgatcac gccacccacc gccacgtcac
      841 gaactccagc gtcagcacga agccaaccgc gacgttcacc gcgcaccacg cgacgaacag
      901 ccccgtccgc cgcacgaaga gcccgccgag cacgaggaag accggcagca ccgccagcac
      961 gtagcgcggc atgctcgcga gcggctgctg cgtaccgagc acggtgagcg gcgacagcgc
     1021 gagcggcaag cagtacagcg cgagcgacag cggcagccgc acgaacgcga gcacgacgag
     1081 cgtgagcagc acgacgcaga agccgatgtt gagcgagttg gcgagcgcga acggcgggtt
     1141 cgccgacgtc gtctcgaaca cgcgccaggg cgcccagaga aagtgcacgc cctcgtgggc
     1201 gacgcgcgcg ccgtgcacga acgtcgtcac cggatcggtg agccgtctcc cccaccctcg
     1261 ctcgtacgcg agcgtgaaca ggaacggctc acgcgtgacg cgccacaggt aggccatgta
     1321 cgcgagcagg ccgagcacgg gcgccgcgac ggccaagagc gacggccggc cgaactcgcg
     1381 ccgtccccgc caccagacgt atgccagcgg gatgacgagg aagacgccga cgctgcgcgt
     1441 caacgcagcg cagtaggcga acggcgcggc gaacgtcagg tcgcggtgaa cgtagatccc
     1501 ccagaggcag ccggcgctga ggaagacgaa gagcgcctcg ctgtacgacg caacgaggaa
     1561 gaacgacgtc gggaagacga cgaaggcgat cgtggcgcgc tttgccgccg cttcgccgac
     1621 caccctcgca gcgagctcgt agaggaagaa gagcgtgccg agcagcgcga ggacggaaac
     1681 gccgacaccg gcgatcgcga tgggaatgcc aatctcggta acggcgcgaa cgacga
//
LOCUS       DATIML010000946         4062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3952001, whole genome shotgun sequence.
ACCESSION   DATIML010000946 DATIML010000000
VERSION     DATIML010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4062
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3952001"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1401)
                     /locus_tag="VLJ38_16310"
     CDS             complement(<1..1401)
                     /locus_tag="VLJ38_16310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02266 family protein"
                     /protein_id="HSU41143.1"
                     /translation="MAQETRKDPRAKVLTVTVRYKSATLDEFIEHHSHDVSRGGMFIK
                     TVSPFPPGTLLKIEVRIAGDQRVMQGVGRVVWKRESGEQHDGAPAGMGVKFIKIDDAS
                     RGVIDQLVAKSGGAVSAFDKGSNEAGTSAPPAAEPTAAPKVRKATMIGLGGMPDATKS
                     ESPKDEPTAPGFFPQSDDSVQQPAPEDRTVMKQAAELLQDALREAGGSLDEVGTAGAA
                     GAAGASSHPPPPVYEPPRPGKASDRAAASASAPPVEAKSSDKPADSKKSEKTAPPASV
                     KPAKPAAKAAAAAKAPVSARPPSSTTGSRRPPAAVQPAASEGGGGGRLAVIVLVLAAV
                     IGGIVLLTRKDEEPAPQPAAEPAQAAPTTPAPTPTQAATPPAETAAPSASASAAPPEP
                     TLAVSATTPAPSATEAKKPKAAPLPVKPLPKPAAQTAAPVVPKAPTAAAPKEPAATAP
                     TEPTATAPKEPAAPKQT"
     gene            1515..1847
                     /locus_tag="VLJ38_16315"
     CDS             1515..1847
                     /locus_tag="VLJ38_16315"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU41144.1"
                     /translation="MTQARIDHFRAFARFPSSLPLWVTPLGGSVERPVRLVNVGLGGL
                     CFEMGESLERGAPLRLELELPGLWDRLTLHGEVAWTAPSADDMTRAGVRYTRPTGRAL
                     RILAENIG"
     gene            complement(1901..2848)
                     /locus_tag="VLJ38_16320"
     CDS             complement(1901..2848)
                     /locus_tag="VLJ38_16320"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HSU41145.1"
                     /translation="MRCPVGGLLLVFAAVACTRREDPRPAPFQPPAPRVSASAAPGRL
                     PAEERTWSFPQTSVGRMSVVVVVPERAEGERFPVLIALHGRGETMKGPERGARGWVSD
                     YALGRAAERLAHPPLNEHDFEGFVEGPHLALLNRALAAVPYRGLIVVCPYLPDVLSSD
                     DPFAQAPHLAHFLVDELIPKVNAETPALGTPAATGIDGVSLGGRAAVTVGLLRPEAFG
                     AVASLQAALDPRNASDITTRAEHALAKNPKLRLRLLTSSGDYYLGALTTIHGALRAAN
                     VPHDYVVVSGPHDYAFNRGPGALEMLTYHDRVLRGAPPP"
     gene            complement(2914..3828)
                     /locus_tag="VLJ38_16325"
     CDS             complement(2914..3828)
                     /locus_tag="VLJ38_16325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41146.1"
                     /translation="MKKFQQGLALGFVFLASACAGSSSESKTAAGAGGSAFTYAPTLN
                     APYHETMQRYEEMSIPGTPMRDAERWTLDWDVVNGQESNLFKRTLKLVGLKLNVNGVD
                     QLRGDEIKPSGVTLEVLTDKDSNVVDVRGTDQMSAAIVALGTPEAQPVLARIFSPQRL
                     KALAVLRSIEQHADFVGRPAAVGSTWTAADSESGGTKQVKVISESPCGSAKCVKVERT
                     YEPDKNALFAEVADRVAAYVKSQGADPTQVKLVSLDVKLQDSLVIDPATMDYHGLNFG
                     QDATLHLAGPNGQLPVALKIERSSDYKY"
     gene            complement(3882..>4062)
                     /locus_tag="VLJ38_16330"
     CDS             complement(3882..>4062)
                     /locus_tag="VLJ38_16330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41147.1"
                     /translation="VPLGALAGYTELFGGTVWDFTAHFAWDRFVSPAPLEHVSALDVA
                     SYRVDFGVVFHSLVR"
BASE COUNT          567 a         1333 c         1478 g          684 t
ORIGIN      
        1 ggtttgcttg ggcgcggcgg gttccttcgg tgcggtggcc gtgggctccg tcggcgcggt
       61 ggccgcgggc tccttgggcg ctgctgccgt cggcgctttc gggacgaccg gcgccgcggt
      121 ttgagccgcg ggtttgggta gcggtttgac gggaagcggg gccgccttgg gcttcttcgc
      181 ttccgtggcg gagggcgcgg gggtggtcgc gctcacggcc agggtgggct cgggcggagc
      241 cgcggacgct gacgcgctcg gagcagcggt ctcggctgga ggcgtcgcgg cctgcgtcgg
      301 ggtgggcgca ggcgtcgtgg gggcggcttg cgccggctcg gccgcgggct gcggcgcggg
      361 ctcctcgtcc ttgcgcgtga ggagcacgat gccgccgatc acggcagcga gcacgagcac
      421 gatgaccgcg agtcggccgc caccgccgcc ctccgaagcg gccggctgca ccgccgcagg
      481 cggacgacgg gaccccgtgg tgctcgacgg cgggcgcgcg gagacaggcg ccttggcggc
      541 cgccgcagct ttagctgcgg gcttggcggg cttgacactc gcgggcggcg ccgtcttttc
      601 cgacttcttg ctgtccgcgg gtttgtcgct cgacttcgcc tcgacgggcg gcgccgaggc
      661 gctggctgcc gcgcgatcgc tcgccttgcc cggacgcggc ggttcgtaaa cgggcggcgg
      721 cggatgcgac gatgcgcccg ctgctccagc cgctccggcc gtgccgacct catcgagcga
      781 gccgccggct tctcgcagcg cgtcctgcaa gagctctgca gcctgcttca tcaccgtgcg
      841 atcttccggc gcgggctgct gtacggagtc gtcgctttgc gggaagaagc cgggagccgt
      901 gggctcgtct ttcggcgact cgctcttggt ggcgtccggc atgccaccga gaccaatcat
      961 ggttgccttg cggaccttgg gagccgccgt tggttccgca gcgggcggag ccgaagtacc
     1021 cgcctcgttc gaacccttgt cgaacgcgct cacggcgccg ccgctcttgg cgaccagctg
     1081 atcgatcacg ccacgcgagg cgtcgtcgat cttgatgaac ttcacgccca tgccggctgg
     1141 cgcgccgtcg tgctgctcac ccgactcgcg tttccagacg acgcggccca caccctgcat
     1201 gactcgctga tcgccggcga tccggacttc gatcttcagc agcgtcccgg gtggaaacgg
     1261 cgacaccgtc ttgatgaaca tccccccccg actcacgtca tgggagtgat gctcgatgaa
     1321 ctcgtccaag gttgcgctct tgtaacggac cgtgacggtg agcaccttgg cacgcggatc
     1381 ttttcgggtt tcctgggcca tcgtagggta cggatcatcc tagcggaacc gtgctcgctc
     1441 agcctaggat cgggagaaga acggtttttg cgccgtttgc cgcacttatt gttccgttac
     1501 catcggaatt gggaatgacg caggctcgaa tcgaccactt ccgcgccttc gcgcgcttcc
     1561 cctcgagctt gccactttgg gtgacgccgc tcggcggcag cgtcgaacgg ccggtgcgtc
     1621 tcgtgaacgt gggactcggc gggctctgtt tcgagatggg cgagagcctc gagcgcggcg
     1681 cgccgctacg cctcgaactc gagctgccgg ggctttggga tcggctgacg cttcatggcg
     1741 aagtcgcgtg gacggcgccg agcgcggacg acatgacgcg cgcgggcgtg cgctacacgc
     1801 gcccgacggg tcgagcgttg cgcatcctcg ccgaaaacat cggctgagca acgcgcgtgc
     1861 ggcggagccg tcacgtcacg cgacgggcgc ggcggagccg tcacggtggc ggcgcgccgc
     1921 ggagcacgcg gtcgtgatac gtgagcattt cgagcgcgcc ggggccgcgg ttgaaggcgt
     1981 agtcgtgcgg gccgctcacg acgacgtagt cgtgaggcac gttcgcggcg cggagggcgc
     2041 cgtgaatcgt cgtgagcgcg ccgaggtagt agtcgccgct gctcgtgagc agacgcagcc
     2101 tgagtttcgg atttttggcg agcgcgtgct cggcgcgcgt cgtgatgtcg ctcgcgtttc
     2161 ggggatcgag cgcggcctgc aggctcgcga cggcgccgaa tgcctcgggt cgtaacaggc
     2221 cgacggtgac ggcggcgcga ccgccgagac tcacgccgtc gatgcccgtc gccgcgggcg
     2281 tgccgagcgc cggcgtttcg gcgttgacct tcgggatgag ctcgtcgacc aaaaagtgcg
     2341 cgaggtgcgg cgcttgcgcg aacgggtcgt cggaggagag cacgtcgggc aagtacgggc
     2401 agacgacgat gaggccgcgg tacggcacgg cggcgagcgc gcgattgagg agcgcaaggt
     2461 gcggcccttc gacgaagccc tcgaagtcgt gctcgttgag cggcgggtgc gcgagccgct
     2521 cggcggcgcg gccgagcgcg tagtccgaga cccagccgcg cgcgccgcgc tcggggccct
     2581 tcatcgtttc gccgcgaccg tggagcgcga tgagcacggg gaagcgctcg ccttcggcgc
     2641 gctcggggac cacgacgacg acgctcatgc gcccgacgct cgtctgcgga aagctccagg
     2701 tgcgctcctc cgcgggcaac ctgcccggcg ccgcactcgc cgagacgcgc ggagccggcg
     2761 gctggaacgg agccggacgc gggtcttcac gtcgcgtgca agcgaccgcc gcaaaaacca
     2821 aaagcagccc accgaccgga cagcgcatgc gcggcgagtg tagctacacg acgagcgggg
     2881 cgtaaacgct acgccccgtc tcgtcgcggt cactcagtat ttgtagtcgc tcgagcgctc
     2941 gattttgagc gcgaccggga gctggccgtt cggacccgcg aggtgcaggg tcgcgtcctg
     3001 gccgaaattc aggccgtgat agtccatcgt cgccggatcg atcacgagcg aatcctggag
     3061 cttcacgtcg aggctcacga gcttcacctg cgtcggatcg gcgccctgtg acttcacgta
     3121 ggcggcgacg cgatcggcga cctcggcgaa gagcgcgttc ttgtcgggct cgtacgtgcg
     3181 ctcgaccttg acgcatttgg cgctgccgca cggcgactcg gagatgactt tgacttgctt
     3241 ggtgccgccc gactccgagt cggccgcggt ccaggtgctg ccgacggccg cgggacgacc
     3301 gacgaaatcg gcgtgttgct cgatgctgcg gagcacggcg agcgccttca ggcgctgggg
     3361 cgaaaagatg cgtgcgagca ccggctgcgc ctcgggcgtg ccgagcgcga cgatcgcggc
     3421 ggacatctgg tcggtgccgc gcacgtcgac gacgttgctg tccttgtcgg tgagcacctc
     3481 gagcgtgacg ccgctcggct tgatctcgtc accgcggagt tgatcgacgc cgttgacgtt
     3541 gagcttgagc ccgacgagct tgagcgtgcg cttgaagagg ttcgactcct ggccgttcac
     3601 gacgtcccag tcgagggtcc agcgctcggc gtcgcgcatg ggcgttcccg gaatcgacat
     3661 ctcttcgtaa cgctgcatcg tctcgtggta cggcgcgttc agcgtcggcg cgtaggtgaa
     3721 cgcgctccct ccggcacccg cggccgtttt cgactcgctg ctcgagcccg cgcacgcgct
     3781 cgccaaaaac acgaaaccca gagccagacc ttgctggaac ttcttcatca gttgacctcg
     3841 cgcgactcgc taccgcggtt tgtttgcaaa ggcaacgcgg ctcagcgcac gagtgagtga
     3901 aatacgacgc cgaaatcgac gcggtaggac gcgacgtcga gcgcactcac gtgctcgagc
     3961 ggcgccggcg agacgaacct gtcccatgcg aagtgcgccg tgaagtccca gacggtgccg
     4021 ccgaagagct cggtgtagcc ggccagcgcg ccgagcggca cg
//
LOCUS       DATIML010000947         3903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3091190, whole genome shotgun sequence.
ACCESSION   DATIML010000947 DATIML010000000
VERSION     DATIML010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3091190"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..639)
                     /locus_tag="VLJ38_16335"
     CDS             complement(<1..639)
                     /locus_tag="VLJ38_16335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41148.1"
                     /translation="MSIRRRSTLLFAFCLLELALGCADLPDTHPSVETGGTASGAQSA
                     SGGANAGHSNGGVTGAGATGGTATSGTSGSLGAAGSDEAGASGSDATGGSFGVGGAAG
                     KGGSAGAGGKAGMGASAGRGATGGSAGRGGNSSGGKAGSGGAGKGGSSGKAGGNAGGA
                     SGRGAGGTVGFGGAGGSSGRATGGAGNAAGKSGNAGSASAGKSGAGGALGSAG"
     gene            complement(733..2223)
                     /locus_tag="VLJ38_16340"
     CDS             complement(733..2223)
                     /locus_tag="VLJ38_16340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HSU41149.1"
                     /translation="MTAPEPPPASPRAVLLSRPVGALATLLLLLLVVELVPGLARLRV
                     FGARPETKTSVALAAAPSASVGAAMLATETLDRGAPAEAGPRAHGPIAALDEDVPDEG
                     KNAPPVGLEDPSGHALDAFYAKLAAVDAKLAGAVARIAHFGDSIIVSDFVSGQLRRDL
                     QRRFGDAGHGFVLVANAWPSYLHWDVERYATAGFRVSTIVGPYAEDGWYGLGGVAFRA
                     DKNVLARFGTAKHGDFGRKVSRFLVSYAEEPHGGRFALRVDGHGAAVVDTNATEPRAR
                     AFELRVADGPHELELQTLTGESRLFGVVLERDGPGVVLDALGVQGARIRFLDKQDDAH
                     WAEVLRWRAPDLLVYQFGANESGDGFVYSMADFHRTMRDVLAQAKTALPQASCLVVGT
                     MDRAAKQGDEIVSVRVIPSLVEEQRRVALELGCAYFDTYRAMGGKGSMPVWVKRGLAQ
                     ADLIHPSGAGAERLANWIYGALLRGYAAWHTDAPARLTAPPQSSAH"
     gene            complement(2220..3671)
                     /locus_tag="VLJ38_16345"
     CDS             complement(2220..3671)
                     /locus_tag="VLJ38_16345"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU41150.1"
                     /translation="MWKLTIQDDQGSKPVVVHFVRDEYTIGRDEGNAVRLTERNISRH
                     HARLVRQPNEWRLQDLGSYNGCYVNGARVGDTQPLQHGDLIQLGDYRLTIEDESAAAG
                     RTDGVLTLPGRPGMNTQADRLVLMAGPGAGQEFVLNSDRMVLGRGEECDVSINHPSVS
                     RVHAEIRRIGESRYEFVDLGSANGVRVNGVELPSTLLDSRDVLELGDVFLKYLPAGEI
                     YIPGGEDTGRHQLLSTPPRGMSNGVKIAIGASIIAIAVVVGLALRSPEPPPAPIAQST
                     TGDKLAQILRDARSLLARGDTEGAMQKASTIPEGSNLRESADFKAIQDAWADALFNQA
                     LATQDVSEKRGFLDRIARATSVDPARRKRAADELDAMQRPAVNVADLPSDTAAVAPPT
                     AASSVASAPTDPTPADTSPSVVLEDAAPAKPLVVGKPAATAKPAATTKAMTAKTTATA
                     KTTATAKPPAPPKPPAPKKDKASSTLVRDNPFE"
BASE COUNT          529 a         1392 c         1362 g          620 t
ORIGIN      
        1 acccgcgctt ccgagagctc cgccggcgcc gctcttgccc gcgctggcgc tgccagcgtt
       61 ccccgacttg cccgcggcgt tgccggctcc gcccgtcgct cggcccgacg agcccccggc
      121 gccgccgaac ccgacggtgc ctcccgcgcc gcgtccgctc gcgcccccgg cgttgccgcc
      181 agctttgccg gagctgccgc ctttgcctgc tccgcccgac cctgctttgc cacccgagct
      241 gttgccgccg cggccagcgc tacccccggt tgcgccccgg ccggcgctcg cgcccatgcc
      301 ggccttaccg ccggccccag cggagccgcc cttgcccgca gcgccgccca cgccgaagct
      361 gccgccggtc gcatcggaac cgctcgcgcc cgcttcgtcg ctgcccgccg ctccgagact
      421 gcccgacgtg ccgctcgtag cggtgccccc cgtcgcgccg gcgccggtca cgccgccgtt
      481 cgagtgcccg gcgttcgcac ccccgcttgc tgattgcgct ccgctcgccg taccgccggt
      541 ctcgacgctc gggtgcgtgt ccggcagatc cgcgcagccg agcgcgagct cgagcaggca
      601 gaaggcgaac agcagggtgg accgacgacg aatggacacg gaacttcccg agcggcggcc
      661 tccacggcca ggaacccccc acgctacagg ctctccgact gcccggcaac gtttgcccgc
      721 ccaacgggcg gctcagtgcg cgctcgactg cgggggcgcc gtgaggcgcg cgggggcatc
      781 ggtgtgccag gctgcgtacc cgcgcaggag cgcgccgtag atccaattgg cgagccgttc
      841 cgcgcctgcg cccgaagggt gaatgagatc cgcttgcgcg aggccgcgct tcacccacac
      901 gggcatcgag cccttaccac ccatcgcgcg atacgtatcg aagtaggcgc agccgagctc
      961 gagcgccacg cgccgttgct cttcgacgag cgaggggatc acacgcacgc tcacgatctc
     1021 gtcgccctgc ttcgcggcgc gatccatcgt gccgacgacg agacagctcg cctgcggcag
     1081 cgccgttttt gcctgcgcga gcacgtcgcg catcgtgcga tggaagtcgg ccatcgagta
     1141 cacgaagccg tcgccgcttt cgttggcgcc gaattggtaa acgaggagat cgggcgcgcg
     1201 ccaacgcaac acttccgccc aatgcgcgtc gtcctgtttg tcgaggaagc ggatgcgcgc
     1261 gccctgcacg ccgagcgcgt cgagcacgac gcccggcccg tcacgctcga gcacgacacc
     1321 gaagagccgg ctctcgcccg tgagcgtttg aagctcgagc tcgtgcggcc cgtcggcgac
     1381 gcgtagctcg aacgcgcgcg cccgcggctc ggtcgcgttc gtatccacga cggccgcgcc
     1441 gtgcccgtcg acgcgcagcg cgaagcggcc gccgtgcggc tcctcggcgt agctcacgag
     1501 aaagcgcgac accttgcgtc cgaaatcgcc gtgcttcgcc gtgccgaagc gggcgaggac
     1561 gttcttgtcg gcgcggaagg cgacgccgcc gaggccgtac cagccgtctt cggcgtaggg
     1621 gcccacgatg gtgctcacgc gaaaaccagc cgtcgcgtag cgctcgacgt cccaatgcag
     1681 gtacgaaggc caggcgttcg ccacgagcac gaagccgtgc cccgcgtccc cgaagcggcg
     1741 ctgcaagtca cggcgcagct gcccggagac gaaatcgctc acgatgatcg agtcgccgaa
     1801 gtgagcgatg cgagcgacgg cgccggcaag cttcgcatcg acggcggcaa gcttcgcgta
     1861 gaaggcgtcg agggcgtgcc cgctcggatc ctcgagcccg accggaggcg cgttcttgcc
     1921 ttcgtcgggg acgtcctcgt cgagcgcggc gatggggccg tgtgcgcgcg gtccggcttc
     1981 ggcgggcgcg ccgcgatcga gcgtctccgt cgcgagcatc gccgccccca cgctcgccga
     2041 aggagcggca gcgagcgcca cgctcgtctt cgtctcgggc cgcgcgccga atacccggag
     2101 ccgcgcaagg cccggcacga gctcgacgac gagcaggagc aggagcagcg tcgcgagcgc
     2161 acccaccggc cgcgagagca gcacggcgcg cggcgacgcc ggcggaggct ccggcgcggt
     2221 cactcgaagg gattgtcgcg cacgagcgtg ctcgaggcct tgtccttctt cggcgcgggc
     2281 ggcttcgggg gcgcgggtgg cttggctgtc gcggtggtct tcgccgtcgc ggtggtcttc
     2341 gccgtcatgg ccttcgtggt cgcggcgggt ttggccgtgg ctgcgggctt gcccacgacg
     2401 agcggtttcg ctggtgccgc gtcctcgagc actacactcg gcgaggtgtc ggccggcgtg
     2461 gggtcggtag gtgccgaagc aacgctgctc gcggcagtcg gcggcgcgac ggctgccgtg
     2521 tcgctcggca gatccgcgac gttcacggcc gggcgttgca tcgcgtcgag ctcgtctgcc
     2581 gcgcgcttgc gacgcgccgg atcgaccgac gttgcgcgcg cgatgcgatc gagaaagccc
     2641 cgtttttccg agacgtcctg cgtcgcgagg gcttggttga agagcgcgtc ggcccacgcg
     2701 tcttggatcg ctttgaaatc ggcggactcg cgcaggttgc tgccctccgg gatcgtgctc
     2761 gccttctgca tcgcgccttc cgtgtcgccg cgtgcgagca ggctccgcgc gtcgcgcaga
     2821 atctgcgcta gtttgtctcc ggtcgtgctt tgcgcgatgg gagcaggcgg cggttccgga
     2881 ctcctgagcg cgagcccgac cacgacggcg atggcgatga tgctcgcgcc gatcgcgatt
     2941 ttcacgccgt tcgacatgcc tcgcggcgga gtgctcagga gctggtggcg acccgtgtct
     3001 tctccacccg ggatgtagat ctctcctgcg ggcagatatt tgaggaacac gtcaccgagc
     3061 tcgagcacgt cgcggctgtc gagcaaggtg ctcggcagct cgaccccgtt gacgcgaacg
     3121 ccgttggcgc tcccgagatc gacgaactcg tagcggctct cgccgatgcg acggatttcg
     3181 gcgtgtacgc ggctgaccga aggatgattg atggaaacgt cgcattcttc gccgcggccg
     3241 agcaccattc ggtcggagtt gaggacgaac tcctgtccgg cgcccggtcc tgccatcagg
     3301 acgagccggt cggcttgggt gttcatgccg gggcggcccg ggagcgtgag cacgccgtcc
     3361 gtgcgaccgg cggccgccga ttcgtcttcg atggtgaggc ggtagtcgcc gagttggatc
     3421 agatcgccgt gctgcagcgg ttgggtgtcg cccacgcgtg cgccgttcac gtagcagccg
     3481 ttgtagctac cgaggtcctg cagtcgccac tcgttcggct gccggacgag acgcgcgtga
     3541 tggcgcgaga tgttgcgctc cgtcaggcgt acggcgttcc cctcatcgcg gccgatcgtg
     3601 tactcgtcgc ggacgaagtg aacgacgact ggtttggaac cctggtcgtc ctggatcgtc
     3661 agcttccaca tcggggcagt tgcgtcggcc tctcgggtgc gcgaggccga acccagtctt
     3721 tcacctttga tcgccggaaa ccagccccac cgagcggctc aaaatgcgcc ggcagcggcc
     3781 gggatcgggg gtactaacgg gctctccggc caaccgaaga gcgcgtcgtg aacgattggc
     3841 cgtagggccc ggagcgtggc gttctcgcgg ctcgggcaga cgcgattcga cagcaggaca
     3901 gcc
//
LOCUS       DATIML010000948         8935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1648967, whole genome shotgun sequence.
ACCESSION   DATIML010000948 DATIML010000000
VERSION     DATIML010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8935
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1648967"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1139
                     /locus_tag="VLJ38_16350"
     CDS             <1..1139
                     /locus_tag="VLJ38_16350"
                     /inference="COORDINATES: protein motif:HMM:NF024985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4139 domain-containing protein"
                     /protein_id="HSU41151.1"
                     /translation="YDLLTPETLLEKYVGRNVRAYRYHEATGKEDVVDAKVLSVAGSP
                     VLQIGNEITFGYPGRLAFPELPPDLIAKPTLVWLVDSTQAQQNVEVSYLAQNMSWKAD
                     YVFVVNASDDRGDLVGWVTLQNQTGATYRDAELKLVAGDVNRVQPEAQMPMRAYKAMP
                     APAASGTAFREEGLFEYHLYTLDRPTTVRDKEQKQVTLLEAAGIGITKKLIFFGQSYW
                     FRGQYGQVSQNQKIGVYLDFKNTEANHLGLPLPKGTVRVYKADKSGAKQFVGEDAIDH
                     TPRDEKVRIKMGEAFDVVADRKQTEWKALGNCTSESAWEIEIRNHKDEAVHVEVREPA
                     GGDWTIVESSLPATKEDAQTFTFDVPVPKRGATKVKYRVRVRWC"
     gene            1133..1984
                     /locus_tag="VLJ38_16355"
     CDS             1133..1984
                     /locus_tag="VLJ38_16355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41152.1"
                     /translation="MLTLASSGLRVEILDPQVELERLGGRYCSGGYVWQVHDERHGPL
                     LAGPCFPERDPPVFDGQGAPEVFELALGQHTAKVGDEVYVLGVGRVRRESAVRPFHVR
                     DNPTVTERATWEVRETAPNTLYFRSQATFGAFAFAIERTVALVGRTLTSATLLRNFGA
                     PELPLRWFAHPFLPWAGERLFASSLELALPEGAALIEDADGWVTRREGSAWSRGHYVL
                     PRVALGGELGVEACHPALERVRALCRFPLGGLALWGNERTWSFEPFFQTLVAPGAEAR
                     WGVEYAF"
     gene            complement(1927..2616)
                     /locus_tag="VLJ38_16360"
     CDS             complement(1927..2616)
                     /locus_tag="VLJ38_16360"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU41153.1"
                     /translation="MSSSESADDAPLLELESARIEQPAFTTEPLSASGGTRLVALVGY
                     FSPLFRLLYGEARLASGAVRLAGQDAREAVRRGTAIVTAQSAPPLARSVRQYLVASAR
                     LGLVEKREAERRVGAVLERLRLSSVAERALADIADGERRRVSLARAALATATLVIAEA
                     PFAELDLTTYADVASLLDELAAERRLIVSFPAEPEPDRGRALLERADFTVRQNAYSTP
                     QRASAPGATSV"
     gene            complement(2613..5090)
                     /gene="sppA"
                     /locus_tag="VLJ38_16365"
     CDS             complement(2613..5090)
                     /gene="sppA"
                     /locus_tag="VLJ38_16365"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HSU41154.1"
                     /translation="MATSLFAQTPDDRATPLPAFGRSAVSDEDTSTITLNPANVALMP
                     SWELRWQAAFLDERALVPWQGHAFSVGVPINLLNLGVGLRVDLLDPPAENAQARFGSR
                     SNYTWLTGALAWAPSNTVALGASFQHAYSENPLLDAQSSWSLGYTMRPANYVGFAIVG
                     HDLNAPTNHNNGHIERSYDLAMALRPFGTRVVELGLEGKYVDAYNPYWIPRGTLGIDI
                     PTVGRLRGEFSMADPSSSAGRDRSWVGSVQMAFALNQPAGTLELAAGTNFGNGLGNEA
                     SNQVGSNIITDVAFRGAREPFGAEPTPYAVRIRLEDTPNVRGHVALLRKLWQIAVEEP
                     RVAEVVLELRTAPAGSFAHIEELRDAIWYLRQNGKRVLCHLEDADGASLYLCSAASKI
                     LINPAGGLRFAGLKTRYFYIKSLLDKLGIKADFVRIGAHKSAPEMFTRDSSSEVARED
                     KIDLLQQFERHFVAGVAAGRNMEPNKLRERIAKGPFIASEAKKAGLVDDFAFDDQIDA
                     AAGKLVGYPIKVLDDDDRAPRAPRDFGSGGRIGMVYVDGDMVDGRSQHIPVLGVRLVG
                     SYTIADSIKQFREDPRIKAVVLRIETGGGSAMAADVIWRQVQLTASVKPVIVSMGSAA
                     ASGGYYIATPATKVFANPLTITGSIGIFYGKADVSELLHKIGVSVEVFKTAPRADAES
                     IFRPFTPEEHAELEVKVAQFYDMFLTRVAQGRKLTKSAVDAVGQGRVWTGEQAYQRKL
                     VDEIGGLRQALEEARKLAGLPYDAPVSELPVESSFLGTLIGAAGAHASETPLLPPQVL
                     EFARALAPFAVHPPDAPLARIELVADE"
     gene            complement(5138..6265)
                     /locus_tag="VLJ38_16370"
     CDS             complement(5138..6265)
                     /locus_tag="VLJ38_16370"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070569 - uridylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /protein_id="HSU41155.1"
                     /translation="MSRLKTQLDALPQDVKDRLSHYGFDPGRLIALGEKLERGEVDAG
                     VVSGKVEPPLASDVVSPPAEGTAEHRQQVERGEQALRDGKVALVVLAGGMATRMGGVV
                     KALVEALPGKTFLDIRLAEIDSLARRYGKAPPFWLMTSDATEAGTRQALGTRVDGYQV
                     ATFTQNLSLRLTPDGKLFLGADQRPSEHAPGHGDLPDALKHSGLLTRFVDGGGELVFI
                     TNLDNLGATLDPALIGFHLAHGQTVTSEVVDKLDEDRGGIPVRVDGKLRILEEFRIPP
                     SFDPKTVRVFNTNTFYVNARALHELKMDWRFFAVKKKVGEAPVIQFERIINEITSELS
                     TVYLRLPRDGAKSRFLPVKDPAELERRRPEILAVTQARGIL"
     gene            6403..>8935
                     /locus_tag="VLJ38_16375"
     CDS             6403..>8935
                     /locus_tag="VLJ38_16375"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HSU41156.1"
                     /translation="MSPYEVGIRRAGELLAQARELGSDDGLAALAVELARALLEASRA
                     GAEANERERAERLAALLRDPTGQAFVSALTDRAHRSTSGARLVAEVDALIATLGVPRS
                     LAGWDRLQLRALQAFGTAVPELTARAVRRRIYEDAAPYLAPAESAALGAFLRERALQG
                     LRVNVNHLGEEVLGAGDAERFLASYLELLARPEVDTISVKLSSIDARIDPLAWDATLA
                     RLEEKLATVYRAALAHATPSADGTSEPKLVYLDMEAYRDLELTVALFMRVLDRPEFWR
                     LTAGIVLQAYVPDSHRQQERLIAWARERLRAGRAPVRMRLVKGANLMLERIDASLRGL
                     ELPIYGSKPDVDASFRRMLRLGSRRENAAALRLGVGSHNLFDIAYTLLLREQRRAHDY
                     IEPEMLEGMADPLRRVVQRVAGRVLVYAPSVDERDFDSAVAYLVRRLDENTAEDNFLR
                     RSFAMQPGDEAFEAESARFLAALERAELIDTTPRRRQDRGASEQAHAELEPPPSASRA
                     GFLNEPDTDFTREVNRRWLERVLERAKSARIDALCSVVGGEVLGGKPQNGFDPSRPHV
                     VPYQWSALDRAGVERAIASAHAAKERWAERSPGEREALLLAVAAELRRARGELIGCMV
                     LDAGKRALEADAEVSEAIDFAEYYARQHARLRERFLLEPKGLVVVTPPWNFPLSIGLG
                     SVLAALVTGNVVLLKPPPETPLVLARAVECCHRAGIPGAALGLVLTDDTAAEPLVVDR
                     RVSTVMLTGGTETARLFRKLRPTLDLVAETGGKNALIVSGMSDREQAISNAVRAAFGH
                     AGQKCSALSLLVLEREVARSAAFRHKLADAVRTLPVGSAWDLESVV"
BASE COUNT         1390 a         3012 c         3116 g         1417 t
ORIGIN      
        1 gctacgactt gctcacgccc gagacgctgc tcgaaaagta cgtcggccgg aacgtgcgcg
       61 cgtatcgcta ccacgaggcc acgggcaagg aagacgtcgt cgacgcgaag gtgctctcgg
      121 tggccggcag ccccgtgctc cagatcggca acgaaatcac cttcggttat ccgggccggc
      181 tcgctttccc cgagctcccg cccgatctga tcgccaaacc cacgctcgtc tggctcgtcg
      241 acagcaccca ggcccagcaa aacgtcgagg tgtcgtatct ggcgcagaac atgtcgtgga
      301 aggcggacta cgtcttcgtc gtcaatgcga gcgacgaccg cggcgatctc gtcggctggg
      361 tgacgcttca aaaccaaacc ggtgcgacct accgcgacgc cgagctcaag ctcgtcgcgg
      421 gcgacgtgaa ccgcgtgcag ccggaagcgc agatgcccat gcgtgcctac aaggcgatgc
      481 cagcgcccgc cgcgagcggg actgcgttcc gggaagaggg gctcttcgag tatcacctct
      541 acacgctcga tcggccgacg acggtgcgcg acaaagagca gaaacaagtg acgctgctcg
      601 aagccgcggg catcggcatc acgaagaagc tgatcttctt cgggcagagt tattggttcc
      661 gcggccaata cggccaggtc tcgcagaacc agaagatcgg cgtttacctc gatttcaaga
      721 acaccgaggc caatcacctc ggcctgccgc tgccgaaagg cacggtgcgc gtgtacaaag
      781 ccgacaagag cggcgccaag caattcgtcg gcgaggacgc gatcgaccat acgccgcgcg
      841 acgagaaggt gcgcatcaaa atgggcgagg cgttcgatgt cgtcgccgat cgcaagcaga
      901 ccgagtggaa ggcgctcggt aactgcacgt cggagtcggc ctgggaaatc gaaatccgca
      961 accacaaaga cgaagccgtg cacgtcgagg tgcgcgagcc cgcgggcggt gattggacga
     1021 tcgtcgagtc gagcctgccc gcgacgaagg aagacgcgca gacgttcacg ttcgacgtgc
     1081 cggtgccgaa gcgcggcgcg acaaaggtca aataccgcgt ccgtgtccgc tggtgctgac
     1141 gctcgcgagc tctgggctgc gcgtcgagat cttggatccg caggtcgagc tcgagcggct
     1201 cggcgggcgc tactgctcgg gcggttatgt ttggcaagtg cacgacgagc ggcacggacc
     1261 gctgctcgcc ggcccctgct ttccggagcg ggatccgccc gtgttcgacg ggcaaggtgc
     1321 accggaagtg ttcgagctcg cgctcgggca gcacacggcg aaggtcggcg acgaggtgta
     1381 cgtgctcggt gtcgggcgcg tgcggcggga gagcgccgtg cggccgtttc acgtgcgcga
     1441 caatccgacg gtcaccgagc gcgcgacgtg ggaggtgcgg gaaaccgcgc cgaatacgct
     1501 gtattttcgg tcacaggcga cgttcggcgc gttcgcgttc gcgatcgagc gcaccgtcgc
     1561 gctcgtggga cggacgctca cgtctgccac gctgctacgc aatttcggcg cacctgagct
     1621 cccattgcgc tggtttgcgc atccgttctt gccgtgggcg ggagagcgcc tattcgcgtc
     1681 gtcactcgaa ttggcgctgc ccgagggtgc ggcgttgatc gaggacgcgg acggatgggt
     1741 gactcggcgt gagggcagcg cttggtcacg cgggcattac gtgctgccgc gcgtcgcgct
     1801 cggcggtgag ctcggcgtgg aggcgtgtca tccggcgctc gaacgggtgc gcgctctctg
     1861 ccgatttccg ctcggtgggc tcgcgctctg gggcaacgag cgcacgtggt cgttcgagcc
     1921 gttttttcag acgctcgtcg cgccgggcgc cgaggcgcgc tggggcgtcg agtacgcgtt
     1981 ttgacgaacc gtaaagtccg cgcgctcgag cagcgctcgt ccgcggtccg gctccggctc
     2041 cgcgggaaat gacacgatga gtcgccgctc ggcggcgagc tcgtcgagca ggctcgcgac
     2101 gtcggcgtag gtcgtgagat cgagctcggc gaacggcgcc tcggcgatga cgagcgtggc
     2161 cgtagcgagc gccgcgcgcg cgagcgagac gcgccgccgc tcgccgtccg caatgtcggc
     2221 gagcgcgcgt tcggcgaccg agctcagccg aagacgctcg agcacggcgc ccacacgccg
     2281 ttcggcttcg cgcttctcga cgagcccgag gcgcgcactc gcgacgagat actgccgcac
     2341 gctgcgcgcg agcggcggag cgctctgcgc cgtgacgatc gcggtgccac gccggaccgc
     2401 ctcacgcgcg tcttgcccgg cgagccgcac ggcgccgctc gcgagccgcg cttcgccgta
     2461 gagcaagcgg aagagcggcg aaaaatagcc gacgagcgcg accaaacgcg tcccgcccga
     2521 cgccgagagc ggctccgtcg tgaacgcagg ttgctcgatg cgtgcgctct cgagctcgag
     2581 cagcggtgcg tcgtcggcgc tttcgctcga gctcactcgt ccgccacgag ctcgatgcgg
     2641 gcgagcggcg cgtccggcgg gtgcacggcg aacggagcca gcgcgcgcgc gaattcgagc
     2701 acctgcggcg gcaagagcgg cgtctcgctc gcgtgggcac cggccgcgcc gatcaacgtg
     2761 ccgaggaagc tcgactcgac ggggagctcg ctcaccggcg cgtcgtacgg tagacccgcg
     2821 agtttgcgcg cctcctcgag cgcttggcgt agcccgccga tttcgtcgac gagcttacgc
     2881 tgatacgcct gctcgcccgt ccacacgcga ccctgcccga cggcgtcgac cgcggatttc
     2941 gtcagcttgc ggccctgcgc gacgcgcgtc aggaacatgt cgtaaaactg cgccactttc
     3001 acttcgagct cggcgtgctc ttcgggcgtg aaggggcgga aaatcgactc ggcgtcggcg
     3061 cgcggtgccg tcttgaacac ctccacgctc acgccgatct tgtgcaggag ctcggaaacg
     3121 tccgccttgc cgtagaagat cccgatactg cccgtgatcg tgagcggatt ggcgaagacc
     3181 ttggtggccg gcgtcgcgat gtaataaccg ccgctcgcgg cggcgctgcc catgctgacg
     3241 atcacgggtt tgacggaggc ggtgagctgc acctgtcgcc agatcacgtc cgccgccatc
     3301 gccgagccgc cgcccgtctc gatgcgcagc actacggcct tgatgcgcgg atcctcgcgg
     3361 aattgcttga tcgagtcggc gatcgtgtac gagccgacga gacgcacgcc gagcacggga
     3421 atgtgttggc tgcggccgtc caccatgtcg ccgtcgacgt aaaccatgcc gatgcgacca
     3481 ccgctgccga agtcgcgtgg cgcgcggggg gcccggtcgt cgtcgtcgag caccttgatc
     3541 gggtagccga cgagcttgcc ggctgcggcg tcgatttggt cgtcgaacgc gaagtcgtcg
     3601 acgaggcccg ccttcttcgc ctcgctcgcg atgaacggcc ccttggcaat ccgctcgcgc
     3661 agcttgttcg gctccatgtt gcggccggcc gcgacccccg ccacgaagtg ccgttcgaac
     3721 tgctggagca ggtctatctt gtcctcgcgc gcgacctcgc tcgagctgtc acgcgtgaac
     3781 atttcgggcg cgctcttgtg cgcgccgatg cgcacgaaat ccgccttgat gccgagcttg
     3841 tcgagcaagc tcttgatgta aaaatagcgc gtcttgagcc ccgcgaagcg gaggccgccc
     3901 gctgggttga tcaagatctt gctcgcggcc gagcaaagat aaagtgaggc gccgtcggcg
     3961 tcctcgaggt gacagagcac gcgcttgccg ttctggcgca ggtaccagat ggcgtcgcgc
     4021 agctcctcga tgtgagcgaa ggagccggcc ggcgccgtgc ggagctcgag cacgacctcc
     4081 gcgacgcgcg gctcctcgac ggcgatttgc cagagcttgc gcaagagcgc gacgtgcccg
     4141 cgcacgttcg gcgtgtcttc gagccttatc cgtacggcat agggcgtcgg ttcggcgccg
     4201 aacggctcgc gcgcgccgcg gaacgccacg tcggtgatga tgttgctgcc gacttggttc
     4261 gacgcttcgt tgccgaggcc gttgccgaag ttggtgccgg ccgcgagttc gagcgtgccc
     4321 gccggctgat tgagcgcgaa cgccatttgc acgctcccga cccaggagcg gtcccgcccc
     4381 gcgctcgagc tcggatccgc catcgaaaat tcgccgcgca ggcgcccgac cgtcgggata
     4441 tcgatgccga gcgtgccgcg cgggatccaa taggggttgt aggcgtcgac gtatttgcct
     4501 tcgaggccga gctcgacgac gcgcgtgccg aacggcctga gcgccatggc gaggtcgtaa
     4561 ctgcgctcga tgtgaccgtt gttgtggttg gtcggcgcgt tcaggtcgtg acccacgatc
     4621 gcgaagccga cgtagttcgc ggggcgcatg gtgtaaccga gcgaccacga gctctgcgcg
     4681 tcgagcagcg ggttctcgga gtacgcatgc tggaacgagg cgccgagcgc gacggtgttg
     4741 ctcggagccc aagcgagcgc ccccgtgagc caagtgtagt tcgagcgact gccgaaacgc
     4801 gcctgcgcat tttccgccgg cggatccagc aggtccacgc gcagcccgac gcccaaattg
     4861 agcaaattga tcggcacgcc gaccgagaag gcgtgcccct gccacggcac gagcgcgcgc
     4921 tcgtcgagaa acgccgcttg ccagcgcaat tcccagctcg gcatcagcgc gacgttcgcg
     4981 gggttcaggg tgatggtgct cgtgtcctcg tccgagacgg cgctgcggcc gaacgccggc
     5041 agcggcgtcg cgcgatcgtc gggcgtctgc gcgaagagcg aagtggccac gagagctgcc
     5101 gccgcgaagg cgccgaagta cgcgtacccg gctgtcctca caggatgcct cgcgcctgcg
     5161 tgacggcgag gatttcgggc cggcgccgct cgagctcggc gggatccttg acgggcaaga
     5221 agcgcgactt cgcgccgtcg cgcgggagcc gcaggtacac cgtcgaaagc tcgctcgtga
     5281 tctcgttgat gatgcgctcg aactgaatca cgggcgcctc gccgaccttc ttcttcacgg
     5341 cgaagaagcg ccaatccatc tttagctcgt gcagagcgcg tgcgttcacg taaaaggtgt
     5401 tggtgttgaa gacgcgcacc gtcttcggat cgaagctcgg cgggatgcgg aactcctcga
     5461 ggatgcggag cttgccgtcg acgcgcaccg gaatgccgcc gcggtcctcg tcgagtttgt
     5521 cgactacttc ggacgtgacg gtctggccgt gcgcgaggtg gaagccgatg agcgccggat
     5581 cgagcgtcgc gcccaggtta tcgaggttcg tgatgaacac gagctcgccg ccgccgtcga
     5641 cgaagcgggt caataatccg ctgtgcttga gcgcgtcggg caaatcgccg tggccggggg
     5701 cgtgctcgct cggccgctgg tcggcgccga ggaagagctt gccgtcaggc gtgagccgga
     5761 gcgagagatt ctgcgtgaag gtggcgactt ggtagccgtc gacgcgcgtg ccgagcgcct
     5821 gacgtgtgcc ggcctcggtg gcgtcgctcg tcatcagcca gaagggcggc gctttgccgt
     5881 agcggcgcgc gagcgagtcg atctccgcga gacgaatgtc gaggaaggtc ttgccgggca
     5941 gggcttcgac cagtgccttc acgacgccgc ccatccgcgt cgccatgccg ccagcgagga
     6001 cgacgagcgc gaccttgccg tcgcgtagcg cctgttcgcc tcgctcgacc tgctgccggt
     6061 gctcggccgt gccttcggcg ggcgggctca cgacatcgct cgcgagcggt ggctcgacct
     6121 tgccgctgac gacccccgcg tcgacctcgc cgcgctcgag cttctcgccg agcgcgatca
     6181 gccgtccagg atcgaagccg tagtgcgaga gccggtcctt cacgtcttgg ggcagcgcgt
     6241 cgagctgggt cttgagccgt gacatggcgc cgaccctaac agaaaaaggc tcgattttcg
     6301 ctgtggcgct gctgccggcc gcgccacacg accgccacgg gcggcaccag cttatgcaag
     6361 cggaagacgg gcgtccggcg agcggcgtac tacgatcggt gtatgtcgcc gtacgaggtg
     6421 ggcattcgac gggccgggga gttgctcgcg caagcgcgag agctcggcag tgacgacggc
     6481 ctcgctgcgc tcgccgtgga gctcgcgcgc gcactgctcg aggcgagccg agccggggcc
     6541 gaagcgaacg agcgcgagcg cgccgaacgt ctcgcggcgc tcttgcgcga ccccacgggg
     6601 caagcgttcg tctccgcgct caccgatcgc gcgcacagga gcaccagcgg cgcgcgcttg
     6661 gtcgccgaag tggacgctct gatcgcgacg ctcggcgtgc cgcgctcgct cgcgggttgg
     6721 gaccggctgc agctgcgcgc gctccaggcg ttcggcacgg ccgtgccgga gctcacggcg
     6781 cgcgccgtcc ggcgtcgtat ctacgaagac gccgcgccgt atctcgcgcc cgcggagtcg
     6841 gccgcgctcg gcgcgttctt gcgcgaacgg gcgctccagg gcctgcgcgt caacgtgaat
     6901 cacctgggcg aagaggtgct cggcgccggc gacgccgagc gattcctcgc gagttacctc
     6961 gagctgctcg cgcggcccga ggtcgatacc atcagcgtga agctctcgtc gatcgacgcg
     7021 cgcatcgatc cgctcgcctg ggacgcgacg ctcgcgcggc tggaagagaa gctcgcgacc
     7081 gtctaccgcg cggctctcgc ccacgcgacc cccagcgcag acggcacgag cgagccgaag
     7141 ctcgtctacc tcgacatgga ggcgtaccgc gacctcgagc tcacggtcgc gctcttcatg
     7201 cgcgtgctcg atcgtcccga gttctggcgg ctcacggctg ggatcgtgct ccaggcgtac
     7261 gtgcccgatt cgcatcgaca gcaagagcgt ctcatcgcgt gggcgcgcga gcggctccga
     7321 gcaggacgcg cgcccgtgcg catgcgactc gtcaagggcg caaacctcat gctcgagcgc
     7381 atcgacgcga gtctgcgcgg cctcgagctc ccgatttacg gcagtaagcc cgacgtggac
     7441 gcgagctttc ggcgcatgct gcgcctgggc tcacgccgcg aaaatgccgc ggccctccgg
     7501 ctcggcgtcg gcagccacaa cctgttcgac atcgcctaca cgctgcttct gcgcgagcag
     7561 cgccgcgccc acgactacat cgaacccgag atgctcgagg gcatggcgga tccgttgcgc
     7621 cgggtcgtgc agcgcgtcgc cggccgcgtg ctcgtgtacg cgccgagcgt cgatgaacgc
     7681 gacttcgaca gcgccgtcgc gtacctcgtg cggcggctcg acgaaaacac ggccgaggac
     7741 aacttcctgc gccgctcgtt cgcgatgcag ccgggcgacg aggccttcga ggccgaaagc
     7801 gcgcgcttcc tcgcggcgct cgagcgagcc gagctcatcg acacgacgcc ccggcgccgg
     7861 caggaccgcg gcgcgagcga gcaagcgcac gccgagctcg agccgccgcc gtcggcgtcg
     7921 cgcgccggct tcctgaacga gccggacacc gacttcacgc gcgaggtgaa ccggcgctgg
     7981 ctcgagcgcg tcctcgagcg cgccaaatcc gcgcgcatcg acgcgctgtg ctccgtcgtc
     8041 ggcggcgagg tcctcggcgg aaagccgcag aacggcttcg atccatcgcg tccgcacgtc
     8101 gtgccgtacc aatggtccgc cctcgatcgc gccggcgtcg aacgcgcgat cgcctcggcg
     8161 cacgccgcca aggagcgctg ggccgagcgc tcgccgggcg aacgcgaagc acttctactc
     8221 gccgtcgccg cggagctgcg gcgcgcgcgc ggcgagctca tcggctgcat ggtgctcgac
     8281 gccggcaagc gtgcgctcga ggccgacgcc gaggtctccg aagcgatcga ctttgccgaa
     8341 tactacgcgc gccagcacgc ccgactgcgc gagcgcttct tgctcgaacc gaaggggctc
     8401 gtcgtcgtga cgccgccctg gaatttcccg ctctcgatcg ggctcggctc ggtgcttgcg
     8461 gcgctcgtca cgggcaacgt cgtgctcttg aagccgccgc cggagacgcc gctcgtgctc
     8521 gcgcgtgccg tcgagtgctg ccatcgcgcc ggcattcccg gcgctgcgct cggtctcgtg
     8581 ctcactgacg acacggccgc cgagccgctc gtcgtcgatc ggcgcgtgag cacggtgatg
     8641 ctgacgggcg gcaccgagac ggcgcggctg ttccgaaagc tgcgccccac gctcgacctc
     8701 gtggcggaaa cgggcggcaa aaacgccttg atcgtgagtg gcatgagcga ccgcgagcag
     8761 gcgatttcga acgccgtgcg cgccgcgttc gggcatgccg gacaaaagtg cagcgcgctg
     8821 tcattgctcg tgctcgagcg cgaggtcgcg cgcagcgccg cgttccgaca caagctcgcc
     8881 gacgccgtgc gcacgctgcc cgtcggctcg gcgtgggatc tcgagagcgt cgtga
//
LOCUS       DATIML010000949         5274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3668793, whole genome shotgun sequence.
ACCESSION   DATIML010000949 DATIML010000000
VERSION     DATIML010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5274
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3668793"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2650
                     /locus_tag="VLJ38_16380"
     CDS             <1..2650
                     /locus_tag="VLJ38_16380"
                     /inference="COORDINATES: protein motif:HMM:TIGR00915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU41157.1"
                     /translation="FGSGDYSMRVWLDPEKADSRSLTASDVVAALREQNVQVAAGTLG
                     QQPSPRDASFQLSINARGRLRDEAEFGEVIVKTSPDGASVRLKDIARIELGANQYALR
                     SLLDNKTAVAIPIFQAPGSNALALSDAVRKSMQELSRNFPEGITYDIVYDPTQFVRSS
                     IDEVVRTLFEALGLVVLVVILFLQTWRASIIPIAAVPVSLVGTFGVMKLLGFSINALS
                     LFGLVLAIGIVVDDAIVVVENVERNIALGLSPRDAARRAMDEVSGPIIAIALVLSAVF
                     VPIGFIPGLTGEFYRQFALTIAISTIISAFNSLTLSPALAAALLRAHDVPKDLPTRAL
                     DRALGWLFRPFNRAFDAASRGYVAVVRKVLRRSGVALVAYAGLLALTWFGFAKVPTGF
                     VPSQDKQYLVSFAQLPDAASLDRSDDVIRRMSKIALETAGVDHAIAFPGLSIAGFTNS
                     PNAGIVFVCLKPFEERKAANLSGPAIAATLNQKFSQIQDAFVAVFPPPPVQGLGTIGG
                     FKLYLEDRGDLGLDALYDNTQKVLGAGSKSPKLAGLFSGYQVNVPQLYADLDRTKAKS
                     QGIAVTDVFETMQAYLGSVYVNDFNRFGRTFQVTVQADAKHRLTPEDVGALQTRNAQG
                     AMVPLGTVLTVKATNGPDRVTRYNGYPAAEVNGGPSPGTSSNQALTAMAAVAQHELPA
                     GMKYEWTDLTYQQILAGNTALFVFPLCVLLVFLVLSAQYESWSLPLSVILIVPMCLLA
                     AIFGVWLDGSDNNIFTQIGLFVLVGLACKNAILIVEFAKDKQEQANQGPVAAVLEACR
                     LRLRPILMTSIAFITGVWPLVSSHGAGAEMRRAMGVAVFAGMIGVTFFGLLLTPVFFT
                     TLRRLGKPKHASALSAPDHASAVPAE"
     gene            2674..3552
                     /locus_tag="VLJ38_16385"
     CDS             2674..3552
                     /locus_tag="VLJ38_16385"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41158.1"
                     /translation="MAPESDPTLTRYIHAANAYPLLSRERELELIGRWLERKDEVARD
                     ELVRAHLRHVVTIALKYRRYGLPLAELIAEGNFGVVHALGKFDPTRGTRFSTYSAYWI
                     RAYVLTYVIRSWSMVGAGSGALRTKTFFKLRRERVRIANLVGEGEHADELLAKALDVS
                     RATVSSMLQSLDGRDVSLDARPYADSSATLGDSLAASGPNQEEALLGSELSGYARDAV
                     RSALKELDERERYIVENRLLADNEEEVTLAEIGRRLGVSRERARQLEQRAKKKLKSAI
                     TELSHGAGWLDVHSAA"
     gene            complement(3556..4461)
                     /locus_tag="VLJ38_16390"
     CDS             complement(3556..4461)
                     /locus_tag="VLJ38_16390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41159.1"
                     /translation="MLGLGLVVYFVQRAGPSKVLAALRAAGPYAPLLAGLEAVAIACD
                     VKAFASLLGPEAALVSLRNWLRSTGAAYGCFALVPAGRAASEVARASFIAPDVGVVRA
                     ATAGAQLQAAALAADGVASAACVLALGAFGVQGHHLPALLSGNAVLTLGSGVGLLYLI
                     RHRRFAARVSARFPRFFAGLTASELMPRTLGVTACCWGLLGRAAQALGYGVAVLAMSG
                     RFSVRAMAVAYGVHAVAATVGVGIPIQLGVADGAYLLFADTLGFQSDPARALAVMFSI
                     RVTQVALAVVGLLVPVVVRRGRGDP"
BASE COUNT          893 a         1753 c         1798 g          830 t
ORIGIN      
        1 cttcggctcc ggcgactaca gcatgcgagt ctggctcgac cccgagaagg ccgactcccg
       61 ctcgctcacg gcaagcgacg tcgtggcggc cttgcgcgag caaaacgtgc aggtcgcggc
      121 cggcacgctc gggcagcagc cctcgccgcg cgacgctagc ttccagctca gtatcaacgc
      181 gcgtggccgt ttgcgcgacg aggccgagtt cggcgaggtg atcgtcaaga cgtcgccaga
      241 cggcgccagc gtgcggctca aggacatcgc gcgcatcgag ctcggcgcga accaatatgc
      301 gctgcgcagc ttgctcgaca acaagacggc ggtcgccatc cccatcttcc aagcgccggg
      361 ctcgaatgcg ctcgcattat cggacgccgt gcgcaagagc atgcaagagc tctcgcggaa
      421 tttccccgag ggcatcacgt acgacatcgt gtacgacccg acgcagttcg tgcgctcgtc
      481 gatcgacgag gtggtgcgga cgctgttcga ggcgctcgga ctcgtcgtgc tggtcgtgat
      541 cttgttcttg cagacctggc gcgcgtcgat catcccgatt gccgccgtgc ccgtgtcgct
      601 cgtcggcacg ttcggcgtga tgaagctctt gggcttttcg atcaatgcgc tctcgctgtt
      661 cggtctcgtg ctcgcgatcg gcatcgtcgt cgacgacgcc atcgtggtcg tggagaacgt
      721 cgagcggaac atcgcgctcg gattgtcgcc gcgcgacgcc gcgcgacgcg ccatggacga
      781 ggtgagcgga cccatcatcg cgatcgcgct cgtgctctcc gccgtcttcg ttccgattgg
      841 cttcatcccc ggcttgacgg gcgaatttta ccggcaattc gcgctcacga tcgccatctc
      901 caccatcatc tcggccttca attcgctcac gctgagtccg gcgctcgcgg cggcgctctt
      961 gcgcgcgcac gacgtgccga aggatctacc gacacgcgcg ctcgatcggg cgctcggctg
     1021 gttgttccgg ccgttcaatc gcgctttcga cgcggcgtcg cgcgggtacg tcgcggtcgt
     1081 gcgcaaagtg ctgcgtcgct cgggggtcgc gctcgtggcg tacgcgggac tcttggctct
     1141 cacctggttc ggcttcgcga aagtaccgac cgggttcgtt ccgagccagg acaagcagta
     1201 cctggtctcg ttcgcgcagc tgcccgacgc ggcctcgctc gaccgttccg acgacgtgat
     1261 tcgacgcatg tccaaaatcg cgctcgaaac agcgggcgtc gaccacgcca tcgcattccc
     1321 cgggctctcg atcgcgggct tcaccaactc tccgaacgcg ggcatcgtct tcgtctgcct
     1381 caaaccgttc gaggaacgca aggcggcgaa cctctccggc cctgccatcg ccgccacgtt
     1441 gaaccagaaa ttttcgcaga tacaagacgc gttcgtggcc gtcttcccac cgccccccgt
     1501 ccagggtctg ggcacgatcg gcggcttcaa gctgtacctc gaggaccgcg gcgacctcgg
     1561 cctggacgcg ctctacgaca acacgcaaaa ggtgctcggc gccggctcga aatcaccgaa
     1621 gctcgctggt ctcttctcgg gctaccaagt gaacgtgccg cagctctacg cggatctcga
     1681 tcgtacgaag gccaaatcgc agggcatcgc cgtgaccgac gtgttcgaga cgatgcaggc
     1741 ttacctcggc tcggtatacg tgaacgattt caatcgcttc ggccgcacct tccaggtcac
     1801 cgtgcaggcg gacgccaagc atcgcctgac gcccgaggac gtcggagcgc ttcagacgcg
     1861 caatgcgcag ggcgcgatgg tgccgctcgg cacggtactg acggtgaaag cgacgaacgg
     1921 gcccgaccgc gtgacgcggt acaacggcta tcccgccgca gaagtgaacg gcggtccctc
     1981 gccaggtacg agctcgaatc aggcgctgac ggcgatggca gccgtcgcgc aacacgagct
     2041 gccagcaggc atgaaatacg aatggacgga tctgacttac cagcagatcc tcgcgggcaa
     2101 caccgccctc ttcgtctttc cgctctgcgt gctcctcgtg ttcttggtgc tttcggctca
     2161 gtacgagagc tggtccttgc cgctcagcgt gattttgatc gtgccgatgt gccttttggc
     2221 ggcgattttc ggggtgtggc tcgacggcag cgacaacaac atcttcacgc agataggcct
     2281 gttcgtgctc gtgggactcg cgtgcaagaa cgcgatcctg atcgtcgagt tcgccaaaga
     2341 caaacaggag caagcgaacc agggccccgt cgccgccgtg ctcgaagcat gccgcttgcg
     2401 cttgcgaccg attttgatga cgtcgatcgc gttcatcacg ggcgtctggc cgctcgtgtc
     2461 gtcgcacggc gccggcgccg agatgcgtcg cgcgatgggg gtcgcggttt tcgccggcat
     2521 gatcggtgtc acctttttcg ggctgctgct cacgccggtg ttcttcacca cgttgcggcg
     2581 gctcggcaaa ccgaagcacg cgagcgcgct gtccgcgccg gaccacgcca gcgccgtgcc
     2641 cgcagaatag ccacgacgct gagaggaaat acgatggccc ccgaatccga cccaacgctc
     2701 actcgctaca tccacgcggc caacgcctac ccgctgctct cgcgcgagcg agaactcgag
     2761 ctcatcggcc gctggctcga acgaaaagac gaggtcgcgc gcgacgagct cgtgcgcgcg
     2821 cacctgcgtc acgtggtgac gattgccctc aaataccggc gctacggctt gccgctcgcc
     2881 gagctgatcg cggagggtaa tttcggagtc gtgcacgcgc tcggtaagtt cgacccgacc
     2941 cgcggcacgc gcttcagcac ctattccgcg tactggatcc gcgcgtacgt cctcacctac
     3001 gtgattcggt cctggagcat ggtgggcgct ggctcgggcg cgctccgcac gaagacgttc
     3061 ttcaaattgc gccgcgagcg cgtgcgcatc gcgaatctgg tcggcgaggg cgagcatgcc
     3121 gacgagctct tggccaaggc gctcgacgtc tcgagggcca cggtgagctc catgctgcaa
     3181 agcctcgacg ggcgcgacgt ctcgctcgac gcccgtcctt acgccgactc gagcgcgacg
     3241 ctgggcgaca gcctcgccgc gagcgggccg aaccaggagg aagcgttgct cggctcggag
     3301 ctcagcggct acgcccgcga cgcggtccgc tcggcgttga aggagctcga tgagcgtgag
     3361 cgctacatcg tcgaaaaccg tctactcgcg gacaacgagg aggaggtgac gctcgccgag
     3421 atcgggcggc gcctcggggt gtcccgcgag cgggcgcgcc aactggagca gcgggccaag
     3481 aagaagttga agagcgccat caccgagctg tcgcacggcg ccggctggct cgacgtgcac
     3541 agcgccgcgt gaggattacg ggtcgccacg gccgcgacgc acgacgaccg gcacgagcag
     3601 cccgaccacg gcgagggcga cttgcgtcac gcggatcgag aacatgaccg cgagcgcgcg
     3661 tgccgggtcg ctttggaagc cgagcgtgtc tgcgaagagt aggtacgccc cgtcagcgac
     3721 gccaagctgg atggggatcc cgacgcccac ggtggcagcg acggcgtgga cgccgtaggc
     3781 gaccgccatc gcgcgtacac tgaacctgcc gctcatggcg agcacggcga cgccgtaacc
     3841 cagcgcttgc gcggctcggc cgagcaggcc ccagcagcaa gccgtgacgc cgagcgtgcg
     3901 cggcatgagc tcgctcgcgg tgagcccggc gaagaagcgc ggaaagcgcg ccgatacccg
     3961 ggcggcgaag cgccggtgcc gaatcaagta caagaggccg acgccactgc cgagcgtgag
     4021 cacggcattg ccgctgagca aagcgggcaa gtggtgcccc tgaacgccga acgcgccgag
     4081 cgcgagcacg caggcggccg acgcgacgcc gtctgccgcg agcgccgccg cctgcagctg
     4141 cgctcctgcc gtggccgctc gcacgacgcc gacgtcgggc gcgatgaacg atgcgcgcgc
     4201 gacctcgctc gccgcgcggc ccgcgggcac gagcgcgaag cagccgtaag cggcccccgt
     4261 cgagcgcagc cagtttcgca aggacacgag cgctgcctcc ggtccgagca gcgacgcgaa
     4321 cgccttcacg tcgcaggcga tcgcgacggc ttcgagtccc gcaaggagcg gagcgtaggg
     4381 cccggcggcg cgtagcgcgg cgagcacctt gctcggtccg gcgcgctgca cgaaatacac
     4441 caccaggccg agcccgagca cgaccaggcc ccagcgcagc cagccgccga cccgaggccg
     4501 cgctgcccga gtgacgagcg accaggcgcg gccaagctgg cctctcgccg cggccgaacg
     4561 cgacagaacg cgtccgcgta cgggacgagc ggcgctttct aggggaggac cgggcacgat
     4621 gggacgaaga gtatgacgaa ccttcgtgcc ggcgctccgg cagcttcgag gaccagacgg
     4681 gccggaagac gcatgagtga tcgcgggtgg aagccggcgc cactcagcgc taagtgccag
     4741 gtttggcccg aggcaacgtg gagcatggcg tgaaacacgt gacgagtctt gccggggtcg
     4801 cgctggtttt ggtcgggggg gtcgttaact gcggggtgag cgatcacgtg gtgggctcga
     4861 tcgcaggacc tcgtgccggg gctcgcgggg ggagtggcgg aaataccgtg gtcgctgtaa
     4921 gcgccggggg gagcggcggg cagacgctga ccgatacagc gggcaccggg caggagctgc
     4981 cggagaacga agctgcaggg cggagggggg attcgaatgg cagcggtggc tcgggggctg
     5041 ggggagcgcc cgaaacagga ggagccgatg tgccgaacgg gaccgccgct gggacgcgca
     5101 gtggcaacgg cggctctgcc ggcaggcctg caagctccgt ctccgactgc atcgtgcgag
     5161 ttgctgggcc ggggagtgat tcgaacgatg gcagtagctg gactctggcg ttgcggaccg
     5221 tacgacgtgg actcgatgcg gcgagcgcgc tagtcgccga agccgggtgt ccta
//
LOCUS       DATIML010000950         4279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3377815, whole genome shotgun sequence.
ACCESSION   DATIML010000950 DATIML010000000
VERSION     DATIML010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4279
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3377815"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VLJ38_16395"
     CDS             complement(<1..388)
                     /locus_tag="VLJ38_16395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase modulator"
                     /protein_id="HSU41160.1"
                     /translation="MTESARYYAPFGPRGSQRVDAELATRLLAIALRHGGDYADLFFE
                     YRAGGGLTFEEGITRSASRGVSLGLGVRVRQGDATGYAHVEDLSWEAMQRAAETAARI
                     ASSGATPPPVRIEPLTLPERYLLDVPS"
     gene            complement(472..2172)
                     /locus_tag="VLJ38_16400"
     CDS             complement(472..2172)
                     /locus_tag="VLJ38_16400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41161.1"
                     /translation="MSVSRFFSRSSAVLMLALAPAHGDSSREIISPAHAALARNPSVA
                     VELRPNPAPNPPPEAEAAPECAELIERAQQEPAEPGTPRLERDRDVVLLYAKSEPVLF
                     TREPAGENKGSEAARTYRTMLRTTSSPWSILDKLWPVFSLNPELGRAVLLRDGYLYAD
                     RPELAFALVDLVTVQMLFSDRTVWIQRGERLLHAERTKAGRYVFTDGDERGQRVKLVL
                     FDRIGTGTPPAPLHRDFRVLREKLGFEAAAVEHLGARDIVAKLRYGALSVPTLLRADG
                     AHLELVCEIPPAGKDAELASVRAETARRARALVPLRRAIRAGVQEGLPFDEPLTEYGQ
                     QDGRLRNLWLAAYESGQNDFEFQTDKYYVFNATGRPLVPEVCVDFIFDSFERASGTWW
                     RPRGEARGRVVGKLDFTTLPDEQRRRATSFIEYAERHPEWFDVYALPEAERVPFKFGH
                     KLADYLVAEGPRFRPGDVVLIRGYAPWDKPWKPRVMHFHSFFVYESDPVSGMPIALAG
                     NPGRPLLQTWQFEAFRTPDRSIWYRVRPRLEWLENSVVLPDETGTPAPPPLTAELAER
                     "
     gene            complement(2402..2860)
                     /locus_tag="VLJ38_16405"
     CDS             complement(2402..2860)
                     /locus_tag="VLJ38_16405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41162.1"
                     /translation="MRLLVTLGALALVAACGSDPAGISPSSFTDGQSEQSDFCDAFAI
                     VQHKCARCHADPPINGAPFALDDYAAIEAPSPSSAEPERRRADRMLSAVRANRMPDTE
                     LTLEPPVEPLTCAERTTLIDWLAAGAPAPAAGDTTCAHAQPKLLNCDSSL"
     gene            complement(2871..3833)
                     /locus_tag="VLJ38_16410"
     CDS             complement(2871..3833)
                     /locus_tag="VLJ38_16410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41163.1"
                     /translation="MARFDVRAWPFKLAGLALFAGACNQMLDIEPASIDPRLTAAGRG
                     GGVSHPAASGGASATGGTETGGTETGGTDGSAASSGGSSGTHQHASSGGSSATTGGAT
                     SASGGDAGSGMAPSSGGSGATATHGGGSDALGASGEAGAGGEKGGPTDLCDQYCALME
                     DNCAGNDEQYRDREQCSTICHLLPQGATGGSDDDSVACRLKYADKMRYANGSELSNYC
                     HQAGPSGEGHCGSVCDAFCALMAEVCTAASAGTYHFASDADCMKTCNALPAAPVPYSS
                     TNPQVSDGNHALCRLFHVTSAAMADPDEHCEHAMGVTLCEATSP"
     gene            complement(3833..>4279)
                     /locus_tag="VLJ38_16415"
     CDS             complement(3833..>4279)
                     /locus_tag="VLJ38_16415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41164.1"
                     /translation="PSSIALEVPALTPAPEATRVPVAADTPHHAGPKPGATQRTLGWA
                     LGGLGVLSFAGSGVLALRAHSLDQQSHAHCLVDEPNACDAEGASLRGQASTYGNVATG
                     AFVAGAALTTTGIVFLLTAPSSNKRQIGFSGHSVPGGGVVVVSGKL"
BASE COUNT          649 a         1468 c         1510 g          652 t
ORIGIN      
        1 tgctcggcac gtcgagcagg taacgctccg gcaacgtgag cggctcgatg cgcacgggcg
       61 ggggggtggc gcccgagctc gcgatgcgcg ccgccgtttc ggcggcacgc tgcatcgcct
      121 cccacgaaag atcctcgacg tgggcgtagc cggtcgcgtc gccttgccgc acgcgcacgc
      181 cgagcccgag cgagacaccg cgcgacgcgc tgcgcgtgat gccctcctcg aacgtgagcc
      241 cgccacccgc gcggtactcg aaaaacaggt ccgcgtagtc gccgccatgc cggagcgcga
      301 tggcgagcag gcgagtcgcg agctccgcat cgacccgctg cgagccccgt ggtccgaacg
      361 gcgcgtagta acgagcgctc tctgtcatgg ccagaaacat agtacgccca gggcgaggcg
      421 cgcgtttcgg cgcttaaccg gccgttcctg ctccggcgcc gtccgcgccg ctcagcgctc
      481 ggcgagctcg gccgtgagcg gcgggggcgc gggcgtgccg gtttcgtccg gcaaaacgac
      541 gctgttttcg agccattcca gccggggccg cacgcgatac cagatgctgc ggtcgggcgt
      601 tcggaacgcc tcgaactgcc aggtttggag caggggtcgc ccggggttac ccgcgagcgc
      661 gatgggcatg ccgctcacgg ggtcgctctc gtagacgaag aacgagtgaa agtgcatcac
      721 ccgcggcttc cacggcttgt cccagggagc gtaaccacga atcaacacca cgtcaccggg
      781 ccggaagcgc ggcccctcgg cgacgagata atccgcgagc ttgtggccga acttgaacgg
      841 cacccgctcg gcttcgggca gcgcgtagac gtcgaaccac tcggggtggc gctcggcgta
      901 ctcgatgaag ctcgtcgcgc ggcgccgctg ctcgtcgggc agcgtcgtga aatcgagctt
      961 gccgacgacg cgcccgcgcg cttcgccccg cggccgccac cacgtgccgc tcgcgcgctc
     1021 gaagctgtcg aagatgaaat cgacgcacac ctcgggcacg aggggccgcc ccgtcgcgtt
     1081 gaacacgtaa tacttgtcgg tttgaaactc gaaatcgttt tgaccgctct cgtacgccgc
     1141 gagccatagg ttgcgcagcc gcccgtcttg ctgcccgtac tccgtgagcg gctcgtcgaa
     1201 cggcaagccc tcctgcacgc ccgcgcgaat ggcgcgccgg agcggcacga gggctcgcgc
     1261 gcgccgagcc gtttcggcgc gcacactcgc gagctcggcg tccttaccgg cgggcggaat
     1321 ctcgcacacg agctccaaat gcgcgccgtc cgcgcggagg agcgtcggca cgctgagcgc
     1381 gccatagcgg agcttcgcga cgatgtcgcg cgcgccgagg tgctcgacag cggccgcctc
     1441 gaagcctagc ttctcacgca gcacgcgaaa gtcgcgatgc agcggagccg gaggcgtccc
     1501 cgtgccgatg cgatcgaaca gcacgagttt cacgcgctgc ccgcgctcgt cgccgtcggt
     1561 gaacacgtag cgtccggctt tggtgcgctc ggcgtgaagc agacgctcgc cgcgctgaat
     1621 ccataccgta cggtcgctga acagcatctg cacggtcacg aggtcgacga gcgcgaacgc
     1681 gagctcgggc cgatcggcgt agagatagcc gtcgcgcaag agcacggcgc gaccgagctc
     1741 gggattgagc gagaacacgg gccagagctt gtcgagaatg ctccagggtg agctcgtggt
     1801 gcgcagcatc gtgcggtaag tgcgcgcggc ttcgctgcct ttgttctcgc ccgccggctc
     1861 gcgcgtgaag agcacgggct ccgacttcgc gtagagcagg accacgtcgc gatcgcgctc
     1921 gagacgcggc gttcccggtt cggcgggttc ttgctgcgcg cgctcgatga gctcggcgca
     1981 ttccggcgcg gcttcggctt cgggaggagg gttgggcgcg ggattcgggc gaagctcgac
     2041 agcgacgctc gggttacgag cgagcgcggc gtgggctggg ctgatgattt cccggctcga
     2101 atcgccgtgg gccggtgcga gcgccagcat gagcactgcg ctcgagcggc tgaagaagcg
     2161 cgatacggac atgaccgcac tcaaaggcgt agaaatcgcc cctgacatac ggaatgtgat
     2221 gcagcgaagt cgcccgcgcc aggcctacat cggcgccgac gcgcgccgac ggtcgcgctg
     2281 actcgccatc actctcaggg gtcgttcgcc ggcgcagcgg cgctgcgttg cgtcaggagc
     2341 gcgttcgcac gtacgcagcg catcgccgac tacgcggctc gcacgctgcc ggcggcgtag
     2401 gtcaaagcga gctatcgcag ttcagtaact tcggctgcgc gtgcgcgcac gtcgtatcgc
     2461 cggctgccgg ggcaggtgcg ccggccgcga gccaatcaat gagggtcgtc cgctccgcgc
     2521 acgtgagcgg ctcgacgggc ggctcgagcg tgagctccgt gtcgggcatg cggttcgctc
     2581 gcacggcgct cagcatgcga tcggcgcggc ggcgctcggg ttccgcgctc gagggcgacg
     2641 gcgcttcgat tgccgcgtag tcgtcgaggg caaagggggc gccgttgatg ggcggatcgg
     2701 cgtgacagcg cgcgcatttg tgctgcacga tcgcgaaagc gtcgcaaaaa tcgctctgct
     2761 cgctctgccc gtcggtaaac gagctcggcg agatgcctgc gggatcggag ccgcaggcgg
     2821 cgaccagcgc tagcgcgccg agtgtgacga gcaggcgcat ggttgcgagc ctacggggac
     2881 gtggcttcac acagcgtcac gcccatcgcg tgctcgcagt gctcgtcggg gtccgccatg
     2941 gccgctgagg tgacgtgaaa tagccggcaa agcgcgtggt tgccgtcgga gacctggggg
     3001 ttcgtactcg agtagggaac cggcgcggcc ggcagcgcgt tgcaagtctt catgcaatcg
     3061 gcgtcgctgg cgaagtgata cgtcccggcg ctggcagccg tgcacacctc ggccatcagc
     3121 gcgcagaacg cgtcacacac gctgccgcaa tgcccctcgc cactcggccc cgcctgatgg
     3181 caataattac tgagctcgct gccgttggca tagcgcatct tgtccgcgta tttcagacgg
     3241 caagcgacgc tgtcgtcgtc cgaaccgccc gtcgcgccct ggggcaacaa gtggcagatc
     3301 gtcgagcact gctcgcgatc gcggtactgc tcgtcgttgc cggcacagtt gtcctccatg
     3361 agggcgcagt actggtcgca gagatccgtg gggccgccct tttcgccgcc cgcgccggct
     3421 tcaccgctcg cgcccagcgc gtcggagccg ccgccatgcg tcgcagtcgc gccgctgccg
     3481 ccagagctcg gcgccatgcc gctgccggcg tcgccgccgc tcgccgaggt cgcgccaccc
     3541 gtcgtggcgc tggagccgcc gctcgacgca tgctggtgcg tcccggagct tccgccgctg
     3601 ctcgctgccg agccatccgt gccgcccgtt tcggtgccgc ccgtttcggt gccgcccgtc
     3661 gcgctggcgc cgccgctggc ggccgggtgc gaaacgccgc cgccgcgtcc ggcggccgtg
     3721 agccgcggat caatcgaggc gggctcgata tcgagcattt ggttgcaggc accggcgaag
     3781 agcgcaaggc ccgcgagttt gaagggccaa gcgcgaacat cgaagcgagc catcagagct
     3841 tccccgagac gaccacgacg ccgccgccgg gcacgctgtg accgctgaag ccgatttgtc
     3901 tcttgttcga gctcggcgcc gtcagcaaga acacgatgcc cgtggtcgtg agcgcggcgc
     3961 cggccacgaa cgcacccgtg gccacgttgc cgtacgtcga ggcctggccc cggagtgacg
     4021 caccttcggc gtcgcacgcg ttcggctcat cgacgagaca atgcgcatgc gactgctggt
     4081 cgagcgaatg ggcgcgcagc gcgagcacgc cggaccccgc gaacgagagc acgccgagac
     4141 caccgagcgc ccacccgagc gtccgctgtg tcgcgccggg cttcggccca gcgtgatgag
     4201 gcgtgtctgc ggcgacgggc acgcgcgtcg cttcgggcgc gggcgtgagc gcgggcacct
     4261 cgagcgctat gctgctcgg
//
LOCUS       DATIML010000951         4872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2511372, whole genome shotgun sequence.
ACCESSION   DATIML010000951 DATIML010000000
VERSION     DATIML010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4872
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2511372"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2891)
                     /locus_tag="VLJ38_16420"
     CDS             complement(<1..2891)
                     /locus_tag="VLJ38_16420"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU41165.1"
                     /translation="MAAGTFAGTTRFELQRLLGAGGMGVVYAAYDHEHRCEVALKLLP
                     SLGRTAAERIKSEFRVASGLHHPNLVSLAELIEHEDHLFFTMELVSGVDWLSYVRGGQ
                     MQRSHGDSRQREPAALCDNDETQRDTDTASLTGWEEPAAVARSAGLLDFAALGVDGAR
                     LRSALRQLTLALTHLHSEDKVHRDIKPSNVLVSEEGRVVLLDFGLAVDLSRERRSPHP
                     ANGTALYMSPEQARGETPTPASDWYSVGTLLYEAIAGRVPFAGTRAQILAAKQEHDPE
                     LPLNLVPGAPEELRALCLALLARVPEARAGGADVLALLERAHSVPLATDRPAAAAPVV
                     GRDEELAAMIRAFDDAVEEPVALLIEGESGVGKTTLIGEFRRKLEVGDGRATIFCNGR
                     CSERESVAFKALDRIVEVLAERYDSIFAPGACDREQAEAAAMAAQAAALAFPVLGRDR
                     DGAGSESRTGLDAWQQQRVAFQGLRDLLSLVAARRRLVLCIDDWQWVDADSIGLLSHV
                     LAAPAPPLLLVIATRPGATPPALPCPHRQIVLGNLEPDCAQQLAERLLREPARSCPTW
                     LARAIAGESLGHPLFIAALARQVAASGDRAARRPDLDAAIGSRVDELPPLARAAAELL
                     AVSRGPLVTAVLQTALSSNDGAPRWPELAHAIARLTVENLARADGVRANDTIDCFHSR
                     VATAILSRIPAARRCEHHRALAMALELHHSEDFESMTDHWAEASDRVRAATYAVRAAE
                     RAEDSLAFERAARLYRRSLDLCPTQSGRVNVETRLAAALGHAGRGRDAADAYLSAASV
                     AAPEQRLELQRHAADQLFRSGYVSDALRLSEQVLPSHGLLLPKSPREALAWLALRRLA
                     IRLRGLRFTRRAAASIPPAELARVDAAWTVAIGLSTVDNLRAAAIQSGCLLMALRVGE
                     PFRVVRALAAEAAYIGTKGVATRARVDRLLALARDLASELSEPYALGFV"
     gene            3114..4595
                     /locus_tag="VLJ38_16425"
     CDS             3114..4595
                     /locus_tag="VLJ38_16425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlkA N-terminal domain-containing protein"
                     /protein_id="HSU41166.1"
                     /translation="MLDPDVCYQALKARDARFDGRLFVGVTSTGIYCRPVCPASTAKR
                     ENCRFFPSAAAAQEAGFRPCLRCRPETAPEHGSWNGSSNTVSRGLSLIASGALDQDDA
                     SVDTLAERLGVGGRQLRRLFQQHLGASPIAVAQTHRVLFAKQLIHETSLPMAEVALAA
                     GFGSVRRFNETFQRLYAHPPSALRRKTAERKSAERGVSVRLRFRPPYDWNALLGFFRA
                     RAVEGVERVDTERYARTLCHEGDLGTLEIRHVPSDRALVATIRFPNVRALPAIVARIR
                     RQFDLAADLVTIGTQLAEDPWLAPLVAARPGLRSPGAWDGFELAVRAILGQQVSVVAA
                     RRLNAELVRLCDRRVPSETASPGLTLVFPSPDDLLATDLSRLPMPGARRRALVHLAEA
                     ALADPALFEPRPTIDETVARLTAVTGIGEWTAQYIALRAARDPDAFPASDLGLQRGAA
                     LQLGERPSARVLLRHAERWRPFRAYAAEHLWAADAAEQQRRAS"
     gene            4592..>4872
                     /locus_tag="VLJ38_16430"
     CDS             4592..>4872
                     /locus_tag="VLJ38_16430"
                     /inference="COORDINATES: protein motif:HMM:NF014870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41167.1"
                     /translation="MTESTRLLIDHLKTPLGRLAVVADEAGRLHAVGFTDGHDRMTSI
                     LEGDGLTPAKDPSGLTTALRAYFDGELAAIAGLTVALGGTEFQNSVWRGL"
BASE COUNT          750 a         1726 c         1681 g          715 t
ORIGIN      
        1 tgaacgaagc cgagcgcata cggctccgaa agctcgctcg cgagatcccg agcgagcgcg
       61 agcagtcggt ctacccgcgc ccgcgtcgcg acgcctttcg ttccgatgta cgccgcctcg
      121 gccgcgagcg cgcgaaccac gcggaacggt tcgcccacgc gcagcgccat cagcaagcag
      181 ccgctctgaa tggcggcggc ccgcaggttg tcgaccgtgg atagaccgat cgccaccgtc
      241 caggcggcgt caacgcgcgc gagctccgca ggcgggatcg aggcggcggc ccggcgcgtg
      301 aaccggagcc cgcgaagtcg gatcgcgagc cgccggaggg cgagccaagc gagcgcctcg
      361 cgcggcgact tcggcaagag cagcccatgc gaagggagca cttgctcgct gagccggaga
      421 gcgtcgctga cgtagccgct ccggaacagc tgatccgcgg catgccgctg aagctcgagc
      481 cgctgctccg gggccgcgac cgaagcggcc gacagatagg cgtcggctgc gtcacgaccg
      541 cggcccgcgt gcccgagcgc agcagcgagc cgagtctcca cgttcactcg accggactgc
      601 gtcgggcata ggtccagact gcgccggtag aggcgcgccg cgcgctcgaa cgcgagcgaa
      661 tcctcggcgc gttccgccgc ccgaaccgcg tacgtggcgg cacgcacgcg gtcggaagct
      721 tccgcccagt ggtccgtcat cgactcgaag tcctccgagt ggtggagctc gagcgccatc
      781 gccaaggcac ggtgatgctc gcaccggcgc gcagcgggta tgcgcgacaa gatcgccgtg
      841 gcaacgcgtg agtgaaaaca gtcgatcgta tcgttcgctc tcaccccgtc cgctcgggcg
      901 aggttctcca ccgtgagtcg cgcaatcgcg tgcgcgagct ccggccagcg cggggcgccg
      961 tcgttcgagg agagcgcggt ctgcagcact gccgttacca gcggcccgcg ggacactgcc
     1021 aagagctcgg cggccgcacg cgccaaagga ggcaattcgt ccacgcgcga gccgatcgcc
     1081 gcgtcgagat cggggcggcg ggctgcgcgg tcaccgctgg cggcgacctg ccgcgcgagc
     1141 gcggcgatga acagcgggtg accaagcgat tcgccggcga tcgctcgcgc gagccacgtg
     1201 ggacaggaac gcgccggctc ccgcagcaaa cgctcggcga gctgctgcgc gcagtcaggc
     1261 tccaagtttc cgagcacgat ctgccggtgc gggcacggca gcgctggcgg ggtcgcgccg
     1321 gggcgcgtgg cgatcacgag cagtaacggc ggcgccggcg cggcgagcac gtgcgagagc
     1381 aagccgatgc tgtcggcgtc cacccactgc caatcgtcga tgcagagtac gagccgccgt
     1441 cgggcggcca ccagcgaaag caagtcgcgc aggccctgaa aagcgacgcg ctgctgctgc
     1501 caggcatcca aaccggtgcg agactcgctt ccggccccgt cgcgatctcg gccgaggaca
     1561 ggaaacgcga gcgccgcggc ttgcgcagcc atggccgcag cctccgcctg ttcacggtcg
     1621 caagcgccgg gcgcgaagat cgagtcgtag cgttcagcca gcacctccac gattcggtcg
     1681 agcgctttga aagccaccga ttctcgttcc gagcaacggc cgttgcagaa gatcgtcgcg
     1741 cgaccgtcgc cgacttcgag tttccggcgg aactcgccga tcagcgtggt ttttcccacg
     1801 cccgactcgc cttcgatgag caaagccacg ggttcttcga cggcgtcgtc gaaggcgcgg
     1861 atcatcgccg cgagttcctc gtcccgtccg acgaccggcg ctgccgccgc tggtcggtcg
     1921 gtcgcgagtg gaactgaatg cgcccgctcc aggagggcca gcacgtccgc accccctgca
     1981 cgcgcctcgg gaacgcgagc gagcaacgcg aggcaaagcg cgcgcagctc ctccggcgcg
     2041 ccgggcacga ggttcagcgg cagctcgggg tcatgttctt gtttagccgc caatatctgc
     2101 gcgcgagttc cggcgaacgg aacgcgccca gcgatcgcct cgtagaggag cgtgcccacg
     2161 ctgtaccagt cagacgccgg cgtgggagtc tcgccacgcg cttgttccgg cgacatgtac
     2221 agcgccgtgc cgttcgccgg gtgcgggctt cgacgctcgc gcgacaggtc caccgccaag
     2281 ccgaagtcga ggagcacgac gcggccttct tcgctcacga ggacgttgga tggcttgatg
     2341 tcgcgatgaa ccttgtcctc ggagtgcaag tgggtgagtg cgagcgtgag ctgccggagc
     2401 gccgagcgga gccgagcgcc gtctacgccc agcgctgcga agtcgagtaa gccagcggag
     2461 cgagcgactg ctgccggctc ctcccagccg gtcagcgagg ccgtgtccgt gtcgcgctgc
     2521 gtttcatcgt tgtcgcaaag agcggcgggt tcgcgctgcc gggagtcgcc gtgcgagcgc
     2581 tgcatttgcc ccccgcgcac gtacgacagc cagtcgacgc ccgacacgag ctccatcgtg
     2641 aagaacagat ggtcctcgtg ctcgatcagc tcggcgaggc tcacgaggtt cgggtgatgc
     2701 aagcccgaag caactcgaaa ctccgatttg atgcgctccg cagccgtgcg tcctaggctc
     2761 gggagtagct tgagcgcaac ctcgcaacgg tgctcgtgat cgtacgctgc gtaaacgacg
     2821 cccataccgc cagctccgag gagtcgctgc agctcgaacc gcgtggtacc cgcgaaagtg
     2881 ccggcggcca tcgttggagc atcttcggcg gggacccgtg cgcgttgcaa ggtgctcctg
     2941 cgcggcaccg aactatccag tccgagcggc ggggcgagct cgcgctcatc gcacactgct
     3001 cggcagcgag gacggcagcg tctctcgcgc acggacgccc tcgagccgcc ctcgccgagc
     3061 acgtccgaaa accgcgagcg ccgggtgccg cgcggtacta tcccttcttc gtcgtgctcg
     3121 accccgacgt ttgctaccaa gcgctgaaag cccgcgacgc gcgcttcgac ggccgcctat
     3181 tcgttggcgt cacttcgacg ggcatttatt gccggccggt ctgccccgcc agcacggcca
     3241 agcgcgaaaa ctgccggttt tttccgtcgg cggccgcggc gcaggaggcg ggatttcggc
     3301 cgtgcctgcg ctgccggccc gaaaccgcac ccgagcacgg ctcctggaac ggctcgtcga
     3361 acacggtgtc gcgtgggctg agcctgatcg cctcgggtgc gctcgatcaa gacgacgcga
     3421 gcgttgatac gctggccgaa cggctcggcg tgggcggacg gcagctgcgc cgcttgttcc
     3481 agcagcacct cggcgcttcg ccgatcgcgg tcgcgcagac gcaccgcgtg ctcttcgcca
     3541 agcagctcat tcacgagacg agcttgccga tggcagaggt cgcgctcgcg gcggggttcg
     3601 gcagcgtgcg gcgcttcaac gagacgtttc aacgcttgta cgcgcatccg cccagcgcgc
     3661 tccggcgtaa aacagcggag cgcaagagcg cggagcgggg cgtcagcgtg cggctccgtt
     3721 tccgcccgcc gtacgactgg aacgcgctgc tcggcttctt ccgcgcgcgc gccgtcgagg
     3781 gcgtcgagcg cgtcgatacg gagcgttacg cgcgcacgct ctgtcacgag ggcgacctcg
     3841 gcacgctcga gatccgccac gtgccgagcg atcgcgcctt ggtcgctacg attcgctttc
     3901 cgaacgtgcg cgccctgccc gcaatcgtcg cgcgcatccg gcgccaattc gacctcgcgg
     3961 cggatctcgt gaccatcggg acgcagctcg cggaggatcc ctggctcgcg ccgctcgtcg
     4021 ccgcgcgacc cgggctgcgc tcgccgggcg cctgggacgg cttcgagctc gcggtgcgcg
     4081 cgattctggg ccagcaagtg tcggtcgtgg cggcgcgccg tttgaatgcc gagctcgttc
     4141 gcctgtgcga ccgtcgcgtg ccgagcgaga ccgcaagccc cgggctcacg ctcgtgttcc
     4201 cctccccgga cgatctgctc gcgactgatt tgagtcgctt gccgatgccc ggtgctcggc
     4261 ggcgcgcgct cgtgcacctg gcggaagccg cgctcgccga cccggcgctg ttcgagccgc
     4321 gcccgaccat cgacgagacg gtggcgcgcc tgacggcggt cacgggcatc ggcgagtgga
     4381 cggcgcagta cattgcgctg cgcgcggcgc gcgatcccga cgcgttcccg gcgagcgacc
     4441 tcgggctcca gcgtggcgcg gcgctgcagc tcggcgagcg accgagcgcc agagtgctgc
     4501 tccgtcacgc cgaacgctgg cggccctttc gcgcctacgc agccgagcat ttgtgggcgg
     4561 ccgacgccgc cgagcagcag cggagagcat catgaccgaa tccacccgtc tcctcatcga
     4621 ccacctcaag accccgcttg gtcgcctcgc cgtcgtcgcg gacgaagccg ggcgcctgca
     4681 cgcggtcggc ttcacggacg gccacgaccg catgacttcc atcctcgaag gcgacgggct
     4741 cacgcccgcc aaggatccga gcggcctcac gaccgcactc cgcgcctact tcgacggcga
     4801 gctcgctgcg attgccgggc tgacggtcgc gctcggcggc accgaatttc agaactccgt
     4861 gtggcgcgga ct
//
LOCUS       DATIML010000952         7521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3668907, whole genome shotgun sequence.
ACCESSION   DATIML010000952 DATIML010000000
VERSION     DATIML010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7521
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3668907"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VLJ38_16435"
     CDS             <1..584
                     /locus_tag="VLJ38_16435"
                     /inference="COORDINATES: protein motif:HMM:NF015817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DbpA RNA binding domain-containing protein"
                     /protein_id="HSU41168.1"
                     /translation="EQSRGRPERGRGRDERSRGRSQAGGDRGREPTGERPPRYTVEDE
                     PAPRYTVSAEPVVGLAAAVAPTPRIAPNVGSAPQPGVEPFGSEVGSRGPAANGREPTP
                     NAGADDETRGGAQSGSEIYVSVGRRDGAKPSDFETVLATAGIGTDVTEYIRVRHRHAF
                     VSVQPDKVEQAIAALNGALIAGRRATAERARRD"
     gene            708..1298
                     /locus_tag="VLJ38_16440"
     CDS             708..1298
                     /locus_tag="VLJ38_16440"
                     /inference="COORDINATES: protein motif:HMM:NF019339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU41169.1"
                     /translation="MPRSAVERLASDVSWAISRGLPKRDLLAMLRRLIATALPGSPEL
                     AFAKLELSELIVQDEPFRAARLALDVLAEGAEPRAFGVLGIAHSLLGNFRAARRAYER
                     AVELEPEHPGYRHNLGHLLDVAFDRPRDALRHLAAARRARPDEGAIASSEAHALARAG
                     QTARALRVLERDLGWPAAEAASCVERWGSSVKTPRG"
     gene            1398..2855
                     /locus_tag="VLJ38_16445"
     CDS             1398..2855
                     /locus_tag="VLJ38_16445"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSU41170.1"
                     /translation="MKTAALSLWLATSALASVALAQAPSAAPAAPSPAPSATTAAPDQ
                     PALPNVEDPMLDPVPPPAHTLTSWREALSLLRSRNTQLRAQIAQVDVARARSREALAY
                     ALPTLGTALGSTFIRTELLRTHRSETGYAFTPPGNITATTSDVRLPTTPTTWGAGAIL
                     NVPLFAPKAWYDKGTADQVIEAEQLSTLEAQRQVVGAVADSIVTAVTAERLADVTRES
                     LRAALSTLDLTKRRATLGASSALDVLRAEGEVQTARGQLVTADETLRRARESLGLALG
                     YAEGWGVQSDIRLDELAADARASCRTQSDVSQRADVRASSANLHISERAKGSVDWAYW
                     PTANAYTQFLYSNVPYANSLHFSWTVGAQLNWTIYDGGLRGGQRQEALANERIAKEQL
                     TDTQRKAQLDVVQSFRGVTVAEQNLGVSTRARDVASETARLARVAFINGSGTSFDLVD
                     TASKLRQAELDLTVKQFEVLRARVAALLALANCDV"
     gene            2916..3374
                     /locus_tag="VLJ38_16450"
     CDS             2916..3374
                     /locus_tag="VLJ38_16450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41171.1"
                     /translation="MAGYSGTSLPRKLGIKPGHQVALLVAPAGFERVLGELPAGATVT
                     HALGRNKAFDVIVFFALTARELERRFASTAKRLVPNGGFWVAWPKRAAGVATDVTERT
                     VRSVGLAAGLVDNKVCAVDETWSALRWVVRVADRPRPGARLPSRTVSARR"
     gene            3429..4139
                     /gene="ccsA"
                     /locus_tag="VLJ38_16455"
     CDS             3429..4139
                     /gene="ccsA"
                     /locus_tag="VLJ38_16455"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HSU41172.1"
                     /translation="MTRSNRIFWGLFAATALAFAVEILFVFLKVPQAQLAAGGLAQKI
                     FYFHAPAAYAMYVCGGVGFLGSAAYLVNASEVRDAWAKSGVECAACFGALAMASGALW
                     AKKAWGVYWTFDPRLTSLLLTVLMYTSIVVLRSFGGAGEAERRFAAGFTILGTTMLPV
                     IHYAVTLWGGNHPKVITQGGGGLHDPDMVRALLLGFVAMTLLASLLLWIRFRLALAMA
                     RLAAVEEQAAAAGLGEHA"
     gene            4136..4366
                     /locus_tag="VLJ38_16460"
     CDS             4136..4366
                     /locus_tag="VLJ38_16460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcmD family protein"
                     /protein_id="HSU41173.1"
                     /translation="MNAQTAAPAASSRASEFVPVEGGTETTSGGMLLIVAYLLMWALL
                     LGFLGLGWRRQKQLETRLSELEKQISGKVPGA"
     gene            4363..4488
                     /locus_tag="VLJ38_16465"
     CDS             4363..4488
                     /locus_tag="VLJ38_16465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41174.1"
                     /translation="MTVEHFIYIPGVAMIALTIGYMLGARAARAEVARAKKRIKE"
     gene            4494..5633
                     /locus_tag="VLJ38_16470"
     CDS             4494..5633
                     /locus_tag="VLJ38_16470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSU41175.1"
                     /translation="MLDFSLSDEQKALIDTARRFSRERIAPVAAECDREARFPRDVFE
                     AAHELGLVNATVEPEYGGPGLHEMDNALIAEELAWGCTGIQTSLLANTLALTPIRLGG
                     SEEQKKKYLGMLTASPLFASYCTTEPSGGSDVAGMKTTFRAVGNDFVLNGEKCWITNA
                     SLASFYVVFATSDPAKRHKGIAAFIVDRDTPGLKVGKHEDKMGQRASDTAAVHFEDVK
                     VPKANLIAPEGEGFKLAMETFNQTRPDIGAMATGLMQRCLDECVAYAKQRKTFGSPIS
                     EHQLVQAMLAEMAIGTEATRLLYQKAAWNLDHGVRDPIVSSYAKAFGADRAMQTAVDA
                     VQVFGGNGYVRDYPVEKLMRDAKVLQIYEGTSQIQRLVIARSLTK"
     gene            5682..6116
                     /gene="tatB"
                     /locus_tag="VLJ38_16475"
     CDS             5682..6116
                     /gene="tatB"
                     /locus_tag="VLJ38_16475"
                     /inference="COORDINATES: protein motif:HMM:TIGR01410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HSU41176.1"
                     /translation="MFGFSFSEIVLIAVVALVAVGPQRLPGMLRNFGTWMRKIRKMTT
                     EVRQQTGIDEMLRAEGLHGGLNELRSLMRGGGSIPVPMPRAIPFAPPEDPYANLDIDV
                     SREYPPEGPDAKGALPDDLVTANEVPAANDSTVAVEESPRPA"
     gene            6113..6946
                     /gene="tatC"
                     /locus_tag="VLJ38_16480"
     CDS             6113..6946
                     /gene="tatC"
                     /locus_tag="VLJ38_16480"
                     /inference="COORDINATES: protein motif:HMM:TIGR00945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HSU41177.1"
                     /translation="MSKLPERDDKPDVPAEQAPEGMTLWEHLDELRSRLIKMIVAFLA
                     GCGLAWTKKELLLQIITQPFVAAWKHGHHTGGPALHFPAPAALFMAYIRIAALAGVIF
                     ALPLMLWQIWAFIAPGLYSKEKRYAVPFVVSSCLLFAGGAYFGWKVAFPLAFQFLLDL
                     GGRVGELEVQPTVMISEYLDFVTRMLLAFGGAAELPIVAFFLSVAGLITHKHLIKFFR
                     YFLVIDFIVAAVVTPPDVMSQLLLAIPLAMLYVISIGVAWVFSRKRRNEATPSDDAPA
                     T"
     gene            complement(6972..7400)
                     /locus_tag="VLJ38_16485"
     CDS             complement(6972..7400)
                     /locus_tag="VLJ38_16485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HSU41178.1"
                     /translation="MKLAVVAVGKIREKNLRAVADDYLGRLQHYVRATEIEVKADAEL
                     ERAMPRDATVIALEPDGEQVTSRELAKRVEAWGRRGKGELVFLIGGAEGIPEPLVRSA
                     HARLGLSRLTLPHRLARVVLFEQLYRAFTILRGEPYARED"
BASE COUNT         1248 a         2609 c         2498 g         1166 t
ORIGIN      
        1 acgaacaaag ccgcggacgc cccgagcgag gccgcgggcg cgacgagcga agccgcgggc
       61 gttcgcaagc aggcggcgat cgcggacgcg agcccacggg agaacggccc ccgcgctaca
      121 cggtcgagga cgagcctgcc ccccgctata cggtctctgc cgagcccgtg gtcggcctgg
      181 ccgctgccgt ggcaccgacg ccacgcatcg cgccgaacgt cggtagcgca ccccagccgg
      241 gcgtcgaacc cttcggctcc gaagtaggaa gccgcgggcc ggcagcgaac ggacgcgagc
      301 ccacgccaaa cgctggagcg gacgatgaga cgcgaggggg cgcgcagtcg ggttcggaga
      361 tctacgtgag cgttggacgg cgcgacggcg ccaagccgag cgacttcgag accgtgcttg
      421 caacggctgg catcggcacc gacgtgaccg agtacattcg cgtccggcac cgccacgctt
      481 tcgtgagtgt gcaacccgac aaagtcgagc aagccatcgc cgcgctgaac ggcgcgctga
      541 ttgccgggcg ccgcgcgacg gccgaacgcg cccgtcgaga ttagcacgag cgccgtcccg
      601 ttgcccgctc gaaagggcgg ataaaaaccg gcggttactt gcgaaaaaaa agcgcagcgg
      661 ggccgttgcc tgagcgcgcg agaacggcta actgaaatgg attgagcatg ccgcgtagcg
      721 cagtcgaacg cctggcctcc gacgtgagct gggccatctc gcgcgggctg cccaagcggg
      781 atttgctggc gatgctgcgg cggctcatcg cgacagccct gccgggttcg cctgagctcg
      841 ccttcgccaa actcgagctg tccgagctca tcgtccagga cgagccgttc cgcgccgccc
      901 gcctcgcgct cgacgtgctc gccgaaggcg ccgaaccgcg cgcgttcggc gtgctcggga
      961 tcgcccacag cttgctcggc aatttccgcg cggcccgccg cgcctacgag cgcgctgtcg
     1021 agctcgagcc cgaacacccc ggctatcgcc acaatctcgg tcatctgctc gacgtggcgt
     1081 tcgaccgccc gcgggatgcg ctgcggcatt tggcggctgc ccgccgcgcc cggccggacg
     1141 aaggagccat cgccagctcg gaagctcacg cactcgcccg tgccggccaa acggccagag
     1201 cgctccgcgt cctcgaacgc gatctcggtt ggccggccgc agaagccgcg tcgtgcgtcg
     1261 agcgctgggg ttcgtcggtg aaaacgccgc gcggctgatg cgcacgccga ccgcccgctt
     1321 cgcgcgctga cggctcgcgc atcgacgatt ctccgcaggg cctttgcgga agggctcgtc
     1381 ggaactatcg atcgggcatg aagacggctg ccctttcctt gtggctcgcg acgagtgccc
     1441 tcgcctccgt cgccctggcg caggcgccga gcgcggcgcc cgctgcgccg agcccagcgc
     1501 cctccgcgac gaccgctgcg cccgaccagc ccgcgctgcc gaacgtggag gatccgatgc
     1561 tcgaccccgt gccgccgccg gcacacacgc tcacgtcctg gcgagaggcg ctgtcgctct
     1621 tgcgcagccg gaatacacaa ctacgcgcgc agattgcgca ggtcgacgtc gcgcgcgcgc
     1681 gatcacgcga ggcactcgcc tacgcgctcc cgaccctcgg gaccgcgctc ggctcgacgt
     1741 tcattcggac ggagctcctg cggacccatc ggagcgaaac cggctacgcg ttcacgccgc
     1801 ccggcaatat cacggcgacc accagcgacg tgcgtctgcc cacgaccccc acgacctggg
     1861 gcgcgggcgc aatcctgaac gttccgctat ttgcgccgaa ggcctggtac gacaaaggca
     1921 cggccgatca ggtgatcgag gccgagcagc tctcgacgct cgaagctcag cgccaggtcg
     1981 tcggcgccgt cgcggattcg atcgtgacgg cggtgacggc ggagcgcctc gcagacgtaa
     2041 cgcgcgaatc cctcagagcc gcgctttcga cgctggattt gacgaaacgg cgcgcgacgc
     2101 tcggcgcgtc gagcgcgcta gacgtgctgc gcgccgaggg cgaggtgcaa acggcgcgcg
     2161 ggcaactcgt cacggccgac gagacgctgc gccgcgcgcg tgaatcgctc ggtctcgcgc
     2221 tcggctacgc cgagggctgg ggcgtgcagt cggacattcg gctcgacgag ctcgccgccg
     2281 acgcgcgcgc gagctgccgg acccaatcgg acgtgagcca gcgcgccgac gtgcgcgcgt
     2341 ccagcgcgaa ccttcacatc agcgagcgag cgaaaggcag cgtcgattgg gcctattggc
     2401 cgaccgccaa cgcttacacg cagttcttgt attccaacgt tccatacgcg aactcgcttc
     2461 acttctcgtg gacggtcggc gcccaactca attggacgat ctacgacggc ggcctgcgtg
     2521 gcgggcagcg gcaagaagcg ctcgccaacg aacgcatcgc gaaggagcag ctcaccgaca
     2581 cgcagcgcaa agcgcagctc gatgtcgtcc aatcgttccg cggcgtcacg gtcgccgagc
     2641 aaaacctcgg cgtgagcacg cgcgcgcgcg atgtcgcttc ggagacggct cgcctcgcgc
     2701 gcgtcgcctt catcaacggc agcggcacga gcttcgacct ggtcgatacg gcgagcaagc
     2761 tccggcaggc tgagctcgac ctcacggtca aacaattcga ggttttgcgc gcgcgcgtcg
     2821 cagcgctact cgcgctcgcg aactgcgacg tctagcgcga gcgcgcctgc ccgggcggct
     2881 tccgcccgga cggcgcatgc taacctgcga gtcgcatggc cggttactcg ggcacctcgc
     2941 tgccgcggaa gctcggcatc aagccggggc accaggtggc gctactcgta gcgcccgcgg
     3001 ggttcgaacg cgtgctcggc gagttgcctg cgggcgcgac ggtcacccat gctctcggcc
     3061 ggaacaaagc cttcgacgtg atcgttttct tcgctctgac agcgcgagag ctcgagcgac
     3121 ggttcgcttc gaccgctaag cggctcgtgc cgaacggcgg attttgggtg gcatggccga
     3181 agcgcgcagc gggcgtcgcg accgacgtca cggaacgcac ggtgcgcagc gtcggcctcg
     3241 cagcaggcct cgtcgacaac aaggtttgcg ccgtggacga gacgtggtcg gcgttgcgct
     3301 gggtggttcg cgtcgccgat cggccacggc cgggcgcgcg gcttccgtcg cgaacggttt
     3361 cggcgcgccg atgaggtaga aatcggcgtg tacgcagttt ccagcggatg tactagcgtg
     3421 aggcgcccat gacccgcagc aaccgaattt tttggggatt gtttgccgcg acggcgctcg
     3481 ccttcgcggt cgagatcctg ttcgtattcc tcaaggtccc gcaggcccag ctcgccgcgg
     3541 gaggcctggc ccaaaagatc ttctactttc acgccccggc cgcgtacgcg atgtacgtct
     3601 gcggcggcgt cgggtttctc ggcagtgcgg cttacctcgt gaacgcgagt gaggtgcgcg
     3661 acgcctgggc caagtcggga gtcgagtgcg ctgcctgctt cggcgcgctc gccatggcga
     3721 gcggcgcact ctgggccaag aaggcctggg gcgtgtactg gaccttcgac ccgcggctca
     3781 cgtcgctgct gctcaccgtg ctcatgtaca cgtctatcgt cgtcctgcgc agcttcggcg
     3841 gcgcgggcga agcggagcgt cgcttcgccg cgggtttcac gattctggga acgacgatgc
     3901 taccggtcat ccactacgcc gtgacgctgt ggggcggcaa ccaccccaag gtgatcacgc
     3961 agggcggcgg cgggctgcac gaccccgaca tggtgcgtgc cctcttgctc ggcttcgtgg
     4021 cgatgaccct gctcgccagc ctcttgctct ggatccgctt ccgcctcgcg ctcgccatgg
     4081 cgcgcctcgc ggcggtcgaa gagcaagccg ccgcggcagg cctgggagag cacgcgtgaa
     4141 cgcacaaact gcggcacccg cggcgagctc tcgcgcgagc gaattcgtcc ccgtcgaagg
     4201 cggcaccgaa acgacgagcg gcggcatgct gctgatcgtc gcctacctgc tcatgtgggc
     4261 actcctgctc ggctttctcg ggctcggctg gcggcgccaa aagcagctcg agacacgcct
     4321 ctcggagctc gaaaagcaaa tctccgggaa agtacccggc gcgtgacggt cgagcacttc
     4381 atctacatcc cgggcgtcgc catgattgcc ctcaccatcg gctacatgct gggcgcgcgt
     4441 gctgcgcgtg ccgaggtggc ccgcgcgaag aagaggatca aggagtaagc gtcatgctcg
     4501 atttctcgct atccgacgaa caaaaggcac tgatcgacac cgcgcgccgc ttttcgcgcg
     4561 aacgcatcgc acccgttgca gccgagtgcg atcgcgaggc gagatttccg cgcgacgtgt
     4621 tcgaggcggc gcacgagctc ggcctcgtga acgccacggt cgagcccgaa tacggcggac
     4681 cgggcctaca cgagatggac aacgcgctca tcgccgaaga gctcgcctgg ggttgcaccg
     4741 gtattcagac gagcctgctc gccaacacgc tcgccctcac gccgatccgc ctcggcggca
     4801 gcgaagagca gaagaagaag tacctcggca tgctcacggc ctcgccgctc ttcgcgagct
     4861 actgcacgac cgagccgagc ggcggcagcg acgtcgccgg catgaagacg accttccgcg
     4921 ccgtgggcaa cgacttcgtc ctgaacggcg aaaagtgctg gatcacgaac gcgagcctcg
     4981 caagcttcta tgtcgtgttc gcgacgagcg atccggcgaa gcgccacaag ggcatcgcgg
     5041 cgttcatcgt cgatcgcgac acgcccggcc tcaaggtcgg caagcacgag gacaagatgg
     5101 gccaacgcgc gagcgacacg gcagccgtgc acttcgagga cgtgaaggtc ccgaaggcga
     5161 acctcatcgc ccccgagggc gaagggttca agctcgccat ggaaaccttc aaccaaacgc
     5221 gaccggacat cggcgccatg gcgacgggcc tgatgcagcg ctgcctcgac gagtgcgtcg
     5281 cctacgccaa gcaacgcaag acgttcggct cgcccatctc ggagcatcaa ctcgtccaag
     5341 ccatgctcgc cgaaatggcc atcggcacgg aggcgacgcg cctgctctac caaaaggcgg
     5401 cttggaacct cgatcacggc gtgcgcgatc ccatcgtctc gagctacgcg aaggcgttcg
     5461 gcgccgatcg ggcgatgcag acggcggtcg atgccgtcca agtcttcggc ggcaacggct
     5521 acgtgcggga ttaccccgtc gaaaagctga tgcgcgacgc gaaggtgctg caaatctacg
     5581 agggcacgag ccaaatccag cggctcgtca tcgcccgcag cctgacgaag taggcgcgcc
     5641 gcggattgcc gcgtcggacg gacgatcgta ggttctttgc cgtgttcgga ttttcgttca
     5701 gcgaaatcgt cttgatcgcc gtcgtggcgc tcgtggcggt cgggccgcag cgcctgcccg
     5761 gcatgctgcg caacttcggg acttggatgc gcaagatccg gaaaatgacg accgaggtgc
     5821 ggcagcagac gggcatcgac gagatgctgc gcgcagaagg cctgcacggc gggctgaacg
     5881 agctcaggtc cttgatgcgc ggcggcggct cgatcccggt tccgatgccc cgggccatcc
     5941 cgttcgcgcc acccgaggat ccgtacgcga atctggacat cgacgtctcg cgcgagtatc
     6001 cgcccgaggg cccggacgcc aagggtgcgt tgccggacga tctcgtcacc gccaacgagg
     6061 tccccgcagc gaacgactcc accgtagcgg tcgaagaatc gccccgcccg gcatgagcaa
     6121 attgcccgaa cgagacgaca aacccgacgt gcccgccgag caagcgccgg aaggcatgac
     6181 gctgtgggag cacctcgacg agctccgctc acggctgatc aagatgatcg tcgcgttcct
     6241 cgcgggctgc ggcctggcgt ggacgaaaaa ggagctcctg ctccagatca tcacccagcc
     6301 cttcgtcgcg gcgtggaagc acgggcatca caccggcggc ccggcgcttc acttccctgc
     6361 cccggcggcg ctcttcatgg cgtacatccg catcgcggcg ctcgcgggtg tcattttcgc
     6421 gctgccgctc atgctctggc agatctgggc gttcatcgcg cccggcctgt actcgaaaga
     6481 gaagcgctac gcggtgccct tcgtcgtgag ctcgtgtctg ctcttcgcgg gcggggccta
     6541 cttcggctgg aaggtcgcct tcccgctcgc gtttcagttt ctgctcgacc tcggcgggcg
     6601 cgtcggcgag ctcgaagtgc agccgacggt gatgatcagc gagtacttgg acttcgtgac
     6661 gcgcatgctg ctcgccttcg gcggcgcggc cgagctgccg atcgtcgcgt tcttcttgtc
     6721 ggtcgcgggg ctcatcaccc acaaacacct gatcaagttc ttccgttatt ttttggtgat
     6781 cgacttcatc gtggccgcgg tcgtgacgcc gccggacgtg atgagccagc tcttgctcgc
     6841 gatcccgctc gccatgctct acgtgatttc gatcggcgtc gcgtgggtgt tttcacgcaa
     6901 gcgccggaac gaagctacgc cgagcgacga cgcgcctgcg acgtaaggcg ccgccgcgcg
     6961 ccccgtgctc gtcagtcctc gcgcgcgtac ggctcaccgc gcaggatcgt gaacgcgcga
     7021 tacagctgct cgaacagcac gacgcgcgcg agccgatgcg gcaacgtgag ccgcgaaagc
     7081 ccgagccgcg cgtgcgccga ccggacgagc ggctccggaa tgccctcggc cccgccgatc
     7141 aagaacacca gctcgccctt accgcgccgg ccccacgcct cgacacgctt ggcaagctcg
     7201 cggctcgtga cctgctcccc atccggctcg agggcgatca ccgtcgcgtc acgcggcatg
     7261 gcacgctcga gctcggcgtc tgccttgacc tcgatttcgg tcgcgcgcac gtaatgctgc
     7321 aggcgaccga ggtagtcgtc ggccacggcg cgcaggttct tctcgcggat tttgccgacc
     7381 gcgacgacgg cgagcttcac gcgcggccgg cggcggggtc gctcacgcgc acgcggcgcg
     7441 cgtccatcca gagcccgtcg agatcgtaga gcgcgcgcga gtcttcctgg aagacgtgca
     7501 cgaccacgtc gacgaagtcg a
//
LOCUS       DATIML010000953         5383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5691177, whole genome shotgun sequence.
ACCESSION   DATIML010000953 DATIML010000000
VERSION     DATIML010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5383
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5691177"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..808)
                     /locus_tag="VLJ38_16490"
     CDS             complement(134..808)
                     /locus_tag="VLJ38_16490"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU41179.1"
                     /translation="MMLAAPWRAIRRRTSLLAGVLALSAFAVACMPAAAPAHAALTQP
                     GASSLAIADALEALIAKHTDTPGDRRYAYERVKAHDAHSAEDALGRAIVAGRLAQVAG
                     LSAPGLVAEVERYARLSSSLDPALRYGAAERLLGTLYVMAPASLLEHGDSETGLELLE
                     QVVKRFPGYPTNHLRLAEAYVALGDPDPARPHLCFCRAHRAELRADEQQLLDELSAQT
                     KVSACH"
     gene            complement(842..1681)
                     /locus_tag="VLJ38_16495"
     CDS             complement(842..1681)
                     /locus_tag="VLJ38_16495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41180.1"
                     /translation="MTRPSSFSRRASAGFFAAALGLSLAPALSAAPSPHGFVVLREYG
                     TGTPSRAQPYLDQLLAVVAKQNQWPKVSGRYFAERAPALDYVHQEKPDFGIFSLPAFL
                     SLKSSLGLSVVGEVISPKAGGTKYFVVSKHASALDGCKSHPLATTFATDAPFIERVVA
                     HGAFKLGDFTLVGAHRPLEPLKQVLRDEAECALIDDAQLEAARHIEQGAELKPVWQST
                     ELPGMAVVSFARADAAAVASFKRTLGGLCSSAAEACATVGIEQIKPAGDERYRAVLDA
                     YGK"
     gene            complement(1678..3711)
                     /locus_tag="VLJ38_16500"
     CDS             complement(1678..3711)
                     /locus_tag="VLJ38_16500"
                     /inference="COORDINATES: protein motif:HMM:TIGR01787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terpene cyclase/mutase family protein"
                     /protein_id="HSU41181.1"
                     /translation="MLGSERANGGRTDARDARPGRLDLLERGLAHLSRTQHADGSWHG
                     DYGGPMFLLPLYVATCRVTGLELEPAVRQEMLRYLKHHQNADGGFGLHVEATSSVFTT
                     SLNYVGARLLGEPASAPWLVRARAWLHEHGGPTHSSAWGKYFLAVLGLYDYRGLNPVM
                     PELWLLPTRAPIHPSRLWCHCRMVYLPLSYLYGRRAVAPVTDTVRELRAELYPEGYER
                     VDWDAARSSLARSDRLTTRSALLDAGNELLLRCEQRIPGLLRRRAIAYVLDQIRREDE
                     NTDFICIGPINKLLHVLVWHFEAPGGREAAAHARRLPEYLYQAPDGVKMNGYNNSRLW
                     DTTFAAQAVARAPETELSRGILERAFAYIEQNQVLTDVREPDRCFRHASKGGWPFSDR
                     AHGWPISDCTAEGLKACLAIEAATGRALERSRLEDAVELMLSLQNADGGWATYELTRG
                     PAWLELLNASDCFREIMIDYSYVECTSACMQALAAYRTRFGSGRFASRIQESILRGRR
                     FLEHAQRVDGSWEGSWGVCFTYGTWFGILGLKAAGASDEAPEITRACEFLLAHQAQDG
                     SWGESVESCARRHYVPTAEGQAVMTAWATLALIAAGRGTSSEVARAVDFLSRRQRTDG
                     SYPDEKLAGVFNKTCGIQYDNYLKIFPFWALVEAERVQRAQPAKQAREEARPG"
     gene            complement(3698..4789)
                     /locus_tag="VLJ38_16505"
     CDS             complement(3698..4789)
                     /locus_tag="VLJ38_16505"
                     /inference="COORDINATES: protein motif:HMM:NF012705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HSU41182.1"
                     /translation="MNALLQEDWSYCERALVDVSRTFSKPIELLPESLRVALTIGYLL
                     CRIVDTVEDYPPLDGRERDALFSSFIDVLDGHGAPEAFSKAFANVPVEDAEIRLARAL
                     PCVMRVFESQAPSTRRATVAWVSEMANGMRLYCRRDRPGALTTLSTYADLERYCYFVA
                     GTVGHLITDLFCDFMQAASGTLEHELRARAESFGVGLQMVNILKDVTEDFARKRCYVP
                     RQLCRAEGIAPERLLAPEHRRQAHRALVPMFEGAGKHLDDALEYTLLIPPEWVQLRLF
                     CLLPLWMAQKTLIVAVGNDAVLVPERPVKISRDAVDEIIEDCLRHANDDAALRRRYAT
                     VAAQFRERLAAVPAGSRPYAAPNGGHARV"
     gene            complement(4786..>5383)
                     /locus_tag="VLJ38_16510"
     CDS             complement(4786..>5383)
                     /locus_tag="VLJ38_16510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41183.1"
                     /translation="WASTGVRTRTFYGRDRAWLVGDAIGHVHPLSGVGITLGVMDAEA
                     AARTTSLDEYRRERDAHVAEMLASVLYLAFSRTDASALRIRHGVLRMLRASAAERSRT
                     MRLLTGEDRASTSFADAFLHATGHVVLTGAESAVARRQSWSEWAGQLRVDVGWLKWPL
                     RAWAPTLGPISRRGAGSRPSVAAPTRSAKTTAEWRSLS"
BASE COUNT          862 a         1808 c         1909 g          804 t
ORIGIN      
        1 acccggtcgc ccttgccggc gagcgcgcgc agcaggttgg cgccgacgtg gccgctgccg
       61 cccgtaacga agactcgctg gctcatctga aatagcgcct aacacgcgag cacgcggcgg
      121 tcacaactcg agctcagtga cacgcggaca ccttcgtttg tgccgaaagc tcgtcgagca
      181 gctgctgctc gtcggcgcga agctcggcgc ggtgcgcgcg gcagaagcag aggtgcgggc
      241 gcgccgggtc ggggtcaccg agcgcgacgt aggcttccgc gaggcgcagg tggttcgtgg
      301 gatagcccgg gaagcgtttg acgacttgct cgagcagctc gagccccgtc tccgaatcgc
      361 cgtgctcgag cagcgaggcc ggcgccatca cgtagagcgt gccgaggagg cgctccgccg
      421 cgccgtagcg caacgcgggg tcgagcgagc tgctcaagcg cgcgtagcgc tccacttcgg
      481 cgaccaaacc gggagcgctg agcccggcga cctgcgcgag ccgcccggcg acgatggcgc
      541 ggccgagcgc gtcctcggcg ctgtgcgcgt cgtgcgcttt gacgcgttcg taagcgtagc
      601 ggcggtcgcc cggtgtgtcg gtgtgcttgg cgatgagcgc ctcgagggca tcggcgatgg
      661 cgaggctcga ggcgccgggc tgggtgagcg ccgcgtgcgc gggcgccgcc gcgggcatac
      721 acgcaacggc gaaggccgag agcgcgagca ctcccgcgag gagcgacgtt cggcgacgga
      781 tcgcacgcca gggcgctgcc agcatcatga gcacgaagtc ctgcgagccg gcggagcagc
      841 gctacttccc gtaggcatcg agcacggcgc ggtagcgctc gtcgccggcc ggcttgattt
      901 gctcgatgcc gaccgtcgcg cacgcctccg ctgccgagct gcacaggccg ccgagcgtgc
      961 gtttgaagga ggcgacggcc gcggcgtcgg cgcgcgcaaa gctcacgacg gccattcccg
     1021 ggagctccgt gctctgccac accggcttga gctcagcgcc ctgctcgatg tgacgcgcgg
     1081 cttcgagctg cgcgtcgtcg atcaaggcgc attcggcttc gtcgcggagg acctgcttga
     1141 gcggttcgag cgggcggtgc gctccgacga gcgtgaagtc gccgagcttg aacgcgccgt
     1201 gggcgacgac ccgctcgatg aagggggcgt cggtggcgaa cgtcgtcgcg agcgggtgac
     1261 tcttgcagcc gtcgagggcg ctcgcgtgct tgctcacgac gaagtacttc gtgccgccgg
     1321 ctttgggtga gatcacttcc ccgacgacgc tgagcccgag cgagctcttg aggctcaaaa
     1381 acgccgggag cgagaagatg ccgaagtccg gcttttcttg gtggacgtag tcgagcgccg
     1441 gcgcccgctc ggcgaagtag cggcccgaca ccttcggcca ctggttctgc ttggcgacga
     1501 cggcgagcag ctggtcgagg taaggctggg cgcggctcgg cgttcccgtg ccgtattcac
     1561 gcaggacgac gaagccgtgc ggcgacggcg cggccgaaag cgcgggtgcg agcgagagcc
     1621 caagcgcggc ggcgaagaac cccgcgctcg cgcggcgact gaaggagctt gggcgcgtca
     1681 tcccggtcgc gcctcctcgc gcgcctgctt cgcgggctgg gcgcgctgaa cgcgttcggc
     1741 ttcgaccagt gcccaaaagg ggaatatttt caggtagtta tcgtactgga tcccgcacgt
     1801 cttgttgaag acgccggcga gcttttcgtc cgggtagctg ccgtccgtgc gctgccgacg
     1861 gctcagaaaa tcgaccgcac gcgcgacctc gctgctcgtg ccgcgaccgg ccgcgatcaa
     1921 agcgagcgtg gcccaagccg tcatcacggc ttgtccttcg gcggtcggta cgtagtgccg
     1981 ccgcgcgcag ctttcgacgg actcgcccca ggagccgtcc tgcgcttggt gtgccaacaa
     2041 aaactcgcag gcgcgcgtga tttccggtgc ttcgtcggaa gcgcccgcag ccttgaggcc
     2101 gaggatgccg aaccacgtgc cgtacgtgaa gcagacgccc cacgaacctt cccacgaacc
     2161 gtcgacgcgt tgagcgtgct cgaggaaacg gcggccgcgc aagatcgatt cttgaatgcg
     2221 cgacgcgaac ctgccgctgc cgaaacgcgt gcggtacgcg gcgagcgcct gcatgcacgc
     2281 cgacgtgcac tcgacgtacg agtagtcgat catgatttcg cggaagcagt ccgacgcgtt
     2341 caagagctcg agccaggcgg gcccgcgcgt tagctcgtag gttgcccagc cgccgtccgc
     2401 gttttgcagc gacaacatga gctcgaccgc gtcctcgagc cgcgagcgct cgagcgctcg
     2461 gccagtcgcc gcttcgatcg caaggcaggc cttgaggccc tcggccgtac aatcgctgat
     2521 cggccagcca tgcgcgcgat cggagaacgg ccagccacct ttcgaggcat gccggaagca
     2581 gcggtcgggc tcgcgcacgt cggtgagcac ttggttctgc tcgatgtacg cgaacgcgcg
     2641 ctcgagtatt cctcgcgaga gctcggtctc gggtgcgcgc gccacggctt gcgcggcgaa
     2701 ggtcgtgtcc cacaggcgcg agttgttgta cccgttcatt ttgacgccgt cgggcgcctg
     2761 gtagaggtac tcggggaggc ggcgggcgtg tgccgcggct tcgcgcccgc cgggagcttc
     2821 gaagtgccag acgagcacgt gcaagagctt gttgatcggg ccgatgcaga tgaaatcggt
     2881 gttctcgtct tcgcgccgga tttgatcgag cacgtaggcg atggctcgcc tgcgcaagag
     2941 cccaggtatg cgctgctcac agcgcagcaa gagctcgttg cccgcgtcga gcagggcgga
     3001 gcgcgtggtc aaccgatcgc tacgcgcgag actcgaacgc gccgcgtccc aatcgacgcg
     3061 ctcgtagcct tcgggataga gctccgcgcg gagctcgcga acggtgtccg tcacgggcgc
     3121 tacggcacgg cggccgtaaa ggtacgacag gggcaagtac accatccggc agtggcacca
     3181 gagccggctc ggatggatgg gcgcccgcgt cggcaagagc cagagctcgg gcatgacggg
     3241 attgagcccg cggtagtcgt agagccccag cacggcgagg aagtacttgc cccacgctga
     3301 ggagtgcgtg ggaccgccgt gctcgtggag ccaagcgcgc gcgcgcacga gccacggtgc
     3361 cgaggcgggc tcaccgagca gccgtgcgcc gacgtagttg agcgaggtcg tgaacaccga
     3421 gctcgtcgcc tcgacgtgca acccgaagcc gccgtcggcg ttctgatgat gcttgagata
     3481 gcgcagcatc tcctgccgca cggcgggctc gagctcgagc cccgtcacgc ggcaggtggc
     3541 gacgtagagc ggcaagagga acatcgggcc gccgtagtcg ccatgccacg agccgtccgc
     3601 gtgctgcgtc cgcgagagat gcgcgaggcc gcgctcgagc agatcgaggc ggcccggcct
     3661 ggcgtcgcgc gcgtcggtgc gccccccgtt tgcgcgctca gacccgagca tgccccccgt
     3721 tgggcgcggc gtacggccgc gagcccgcgg gtacggcggc cagacgctcc cggaactgcg
     3781 ccgcaacggt cgcataacgg cggcgcaggg cggcgtcgtc gttcgcgtgc cgcaggcagt
     3841 cctcgatgat ttcgtccacg gcgtcgcgcg agatcttcac cgggcgctcc ggcacgagca
     3901 cggcgtcgtt gcccacggcg acgatcagcg tcttttgcgc catccagagc ggcaacagac
     3961 agaagaggcg gagctgcacc cattccggcg ggatcaggag cgtgtactcg agcgcgtcgt
     4021 cgaggtgctt gcccgcgccc tcgaacatcg gcacgagcgc ccggtgcgcc tgccggcgat
     4081 gctcgggcgc gagcagccgc tcgggcgcaa tgccctcggc ccgacagagc tggcgcggga
     4141 catagcagcg cttgcgcgcg aaatcctccg tcacgtcctt caggatgttg accatctgca
     4201 ggccgacgcc gaacgactcg gcgcgcgcgc ggagctcgtg ctcgagcgtg cccgacgccg
     4261 cctgcatgaa atcgcagaac agatccgtga tgaggtgccc gacggtgccg gccacgaagt
     4321 agcagtaacg ttcgaggtcc gcgtacgtgc tgagcgtcgt gagcgcgcct ggccgatcgc
     4381 gccggcaata gaggcgcatg ccgttcgcca tctccgacac ccacgccacc gtcgcgcggc
     4441 gcgtcgaagg agcctgactc tcgaacacgc gcatcacgca cgggagcgcg cgagccaagc
     4501 ggatctcggc gtcttcgacg gggacgttgg cgaacgcctt cgagaacgct tccggcgccc
     4561 catggccgtc gagcacgtcg atgaacgagc tgaagagcgc gtctcgctcg cgcccgtcga
     4621 gcggcggata gtcctccacc gtatcgacga tgcgacagag caaatagccg atcgtgagcg
     4681 cgacgcgcaa cgactccggc aagagctcga tcggcttcga gaaggtgcgc gagacatcca
     4741 ccaatgctcg ctcacagtac gaccagtctt cttgaagcaa ggcgttcaag acaatgacct
     4801 ccactcagct gtcgttttgg ccgagcgcgt gggagcggcg acgctcggcc gtgatccggc
     4861 gccacgccgg gaaatggggc cgagggtggg cgcccacgcg cggagcggcc atttcagcca
     4921 gcccacgtcc acgcggagct gccccgccca ctcggaccaa gattgtcggc gcgcgacggc
     4981 gctctccgcg ccggtgagca ccacgtgccc ggtcgcgtgc aggaacgcgt cggcgaaact
     5041 cgtgctcgcg cgatcctcgc ccgtgagcag ccgcatggtg cgactgcgtt ccgcggcgct
     5101 ggcgcggagc atccggagca cgccgtgacg gatcctgagc gcgctcgcgt ccgtgcgcga
     5161 gaacgccagg tagagcacgc tcgcgagcat ctcggcgacg tgggcgtcgc gctcgcgccg
     5221 gtactcgtcg aggctcgtcg tgcgcgcggc ggcttcggcg tccatcaccc cgagggtaat
     5281 accgactccg ctcaaagggt gaacgtgtcc gatcgcgtcc cccacgagcc acgccctgtc
     5341 ccggccgtag aaggtccgcg tccgaacgcc cgtcgacgcc cag
//
LOCUS       DATIML010000954         3806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1070613, whole genome shotgun sequence.
ACCESSION   DATIML010000954 DATIML010000000
VERSION     DATIML010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3806
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070613"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1765)
                     /locus_tag="VLJ38_16515"
     CDS             complement(203..1765)
                     /locus_tag="VLJ38_16515"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41184.1"
                     /translation="MDDSPLELDVIRRLLSPYHDVQTFTDGPSVIETLATGPRPDALV
                     VDWHMPQMSGLELCRFLRERYDAASLPILILTMSGGTDNIVDGFKAGANDFVVKAAHG
                     DELRARVRTLVRVRLLHERVRRAELAAQQARQSAEDANQAKDAFMATVSHELRTPLNS
                     ILGWAHLLKVNTPDEATLQRGLETITRNATIQVQLIDDILDTARVMSGKLRIDLKPVD
                     FAEILRAAVDSQRPAADSRGLSVEIVVGAPKTVVTGDSDRLQQAVSNLLSNAIKFTPR
                     GGWIRVALTSGAAGLELAVADSGKGIAADFLPHVFDRFRQQDATATRRFAGLGLGLAL
                     VRHLISAHGGSVVAESEGEGKGATFRIRLPFDAAGSKPRHDRDERTPLQQPSVRDISI
                     GKLANMNLLIVEDDDDARELLAALLSEEGATVASARTADEALSTLAARCPDVLLSDIG
                     LPGMDGFELIRRVRQIYPPEKLPAIAFTAYSQVEDQQSTRKAGFQAHVSKPAAPGEVV
                     QLVSRVARGHAP"
     gene            1970..2356
                     /locus_tag="VLJ38_16520"
     CDS             1970..2356
                     /locus_tag="VLJ38_16520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41185.1"
                     /translation="MSAILVVDDSKVMRDMVVACLRAIAGTTYTHASTGLEAIERLSL
                     AHFDLMVLDLNMPDVGGVEVLEFVRGQDRLRSLPVLIVTTRGDDESRERVLRAGATAF
                     LAKPFTPDAIIGEVRRLLPEPAEARA"
     gene            2353..>3806
                     /locus_tag="VLJ38_16525"
     CDS             2353..>3806
                     /locus_tag="VLJ38_16525"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSU41186.1"
                     /translation="MNTSTDLKEFLTAYLVEAEEHVALANQRLLALESAQRSGGHDAR
                     ALREIFRSLHTIKGLSAMVGVEPVVAIAHRLEAFVRGYDRLGTAPPLHSTDVLLKGVQ
                     AIAQRLTALGRGEAANPPPPELLAELDRLDSTQAALGEHSGPELALDPELLGKLAPFE
                     VEQAVRGLSSGERGLIAEFFPSPERAALGFSINSVRERLSACAEIVRVLPRSLPVSPE
                     SPAGLSFVLLLLTRANDEQIASAVGVSPATLKTFRTGRDVRTSAPSDGIGAPALDDEE
                     NDPLAAGVRRGIVRVDVNRLDDAMEELATLIVTRYRLARAVAALTARGVNTRELSEVV
                     ADNARQLRSLRAAIVRVRMVSVSDLLDRVPLLVRGLQRTSNRRVRVELEGTEAELDKS
                     VSERLFPVIVHLVRNAVDHAIETPDERVRRKKPEEGLLRIACRAHSNTRLELTVSDDG
                     RGIDRQAVARKAAKPVPESDAALLELLCMPGLSTR"
BASE COUNT          609 a         1285 c         1303 g          609 t
ORIGIN      
        1 cgaggacgag ccacgtcaag cgagagcccc gcagcgtgag ccaggctgtt gtcatgcgag
       61 gagcgagttg caatcggcgt gccctcgcgc ccagacgcga cagcagctcc actcgagcgc
      121 tcgacccgtc ggagacccgc cgcgcaagcc tgcctcggca gggcagccac gtgcgatgca
      181 gagcgactga cgaccgagtc gctcagggag cgtgtccgcg cgcaactcgg gacacgagct
      241 gaaccacttc gcccggcgcc gcaggcttgg acacgtgcgc ttggaacccc gccttgcgcg
      301 tcgattgctg atcttcgacc tggctgtagg cggtgaaggc gatggcggga agcttctccg
      361 gcgggtagat ttggcgcaca cggcggatga gctcgaagcc gtccatgccg ggcaggccga
      421 tgtcgctgag taagacgtcg gggcagcgcg cggcgagggt cgagagcgcc tcgtcggccg
      481 tgcgagccga cgccacggtg gccccttctt cggacagcag cgcggcgagg agctcgcggg
      541 cgtcgtcgtc gtcctcgacg atcaggagat tcatgttggc gagcttgccg atcgaaatgt
      601 cgcgcaccga gggctgttgg agcggcgtcc gctcgtctcg atcgtggcgc ggcttcgacc
      661 cagcagcgtc gaagggcaac cggatccgaa acgtcgcgcc tttgccctcg ccttcgcttt
      721 ccgcgacgac gctgccgccg tgggccgaga tgagatggcg gacgagtgca aggccgagcc
      781 cgaggccggc gaagcgacga gtggcggtgg cgtcttgctg gcggaagcga tcgaagacgt
      841 ggggtaagaa atcggccgca atgcccttgc cggaatcggc gaccgccagc tcgaggcccg
      901 ccgctccgga cgtgagcgcg acgcggatcc agccaccccg cggcgtgaat ttgatcgcgt
      961 tgctgagcaa attcgacacg gcctgctgaa gccgatcgga gtcccccgtc accacggtct
     1021 tcggcgcgcc gaccacgatt tcgacgctga gcccccgcga gtcggccgcc gggcgttggg
     1081 aatcgacggc agctcgcagg atttccgcga aatcgacggg cttgaggtcg atgcgcagct
     1141 tgcccgacat gacgcgcgcc gtgtcgagaa tgtcgtcgat gagctgcact tggatggtgg
     1201 cattgcgcgt gatggtctcg agaccgcgct ggagcgtcgc ctcgtcgggg gtgttcacct
     1261 tgagcaggtg cgcccagccg agaatcgaat tcaacggagt gcgaagctcg tgcgaaacag
     1321 tcgccatgaa agcgtctttc gcttgattgg cgtcctcggc ggattggcga gcctgttggg
     1381 cggcgagctc tgcgcgccgg acccgttcgt ggagtaaccg cacgcggacg agggtgcgaa
     1441 cgcgcgcgcg gagctcgtcg ccgtgcgccg ctttgaccac gaagtcgttg gcgccggcct
     1501 tgaagccgtc gacgatgttg tcggtcccgc ccgacatcgt gagaatcaga atcggcagac
     1561 tcgccgcgtc atagcgctcc cggagaaaac ggcagagctc gagtccggac atttgcggca
     1621 tgtgccagtc aacgacgagc gcgtccgggc gggggccggt cgcgagcgtc tcgatcacgc
     1681 tcgggccgtc cgtgaacgtc tgcacgtcgt ggtagggcga gagcaagcga cgaattacgt
     1741 ccagttcgag cgggctgtcg tccacgagcc agaccactcc acggtcgtcg tcgccggcgt
     1801 ggctttcaac tgagtgctcc ggcggactcg gcatgcgttc ggaaaattct cgctctccgc
     1861 ggtgcacgct agcgccgatc acgcgcgagc gcagcgtagc gttacgcccc gcatcggccc
     1921 ggtccgccgc cttgaccctc ggggagcatg gccctactgt ctcgcgcaaa tgtccgcgat
     1981 tttggtggtg gatgacagca aagtcatgcg cgacatggtc gtggcatgcc tgcgcgccat
     2041 cgcggggaca acctacacgc atgcctccac ggggctcgag gcgatcgagc gcctctcgct
     2101 cgcccatttc gacctgatgg tgctcgactt gaacatgccc gacgtgggcg gcgtggaggt
     2161 gctcgaattc gtgcgcggac aggatcggct gcgctcgctg cccgtcctga tcgtgaccac
     2221 gcgcggggac gacgaatcgc gggagcgggt gctgcgcgcg ggtgcgacgg cgtttctcgc
     2281 caagccgttc acgccggacg ccatcatcgg cgaggtacgt cgcctactac ccgaacccgc
     2341 ggaagcgcgg gcgtgaacac ctcgaccgac ctcaaggagt ttctcaccgc gtatttggtc
     2401 gaggccgagg agcacgtcgc tctggcgaac cagcggctcc tcgcgctcga atccgcacaa
     2461 agaagcggcg ggcacgacgc gcgcgccttg cgcgaaattt ttcgctcgct ccacaccatc
     2521 aagggccttt cggcgatggt cggggtcgag cccgtcgtcg ccatcgcgca tcggctggag
     2581 gcgttcgtcc gcgggtacga tcgcctcggt acggcgccgc cgctccactc gacggacgtg
     2641 ctcttgaagg gggtccaagc catcgcgcaa cggctcacgg cgctcgggcg cggggaagcg
     2701 gcaaacccgc ccccgccgga gttactcgcc gagctcgaca ggctcgattc cacgcaggcc
     2761 gcgctcggcg aacactccgg gcccgagctc gccctcgacc ccgagctgct cggcaagctg
     2821 gctcccttcg aggtcgaaca ggccgtccgc ggcctcagca gcggcgagcg cggcctgatc
     2881 gcggagttct ttccctcgcc cgagcgtgcg gccctcggat tctcgatcaa ctccgtgcgc
     2941 gagcggctga gcgcctgcgc ggagatcgtg cgggtactgc cccggtccct gcccgtctcg
     3001 cccgagtcgc ccgcggggct gtctttcgtt ctgctcctgc tcacgcgagc aaacgacgag
     3061 cagatcgcgt cggctgtcgg agtaagcccc gccacgctca aaaccttccg aaccggccgc
     3121 gacgttcgca cctccgcgcc atccgacggc atcggtgctc cagccctcga cgacgaagag
     3181 aacgacccgc tcgcggccgg agtgcggcgc ggcatcgtgc gcgtcgacgt gaatcggctc
     3241 gacgacgcga tggaggagct cgccacgctg atcgtgaccc gctatcggct ggcgcgcgcc
     3301 gtcgcggcgc tgaccgcacg cggcgtgaac acgcgcgagc tcagcgaggt ggtcgcggac
     3361 aacgcgcgcc agctccgcag cttgcgtgcc gccatcgtgc gcgtgcgcat ggtgtccgtc
     3421 tcggatttgc tcgaccgcgt gccactgctc gtgcgcggcc tgcagcgcac gtccaatcgt
     3481 cgcgtgcggg tcgagctcga gggcaccgaa gcggagctcg acaaatccgt gtccgagcgc
     3541 ttgttccccg tgatcgtgca cctggtgcgc aacgccgtgg accacgcgat cgaaactccc
     3601 gacgagcgcg tacgccgcaa gaagcccgaa gaaggcctgt tgcgcatcgc ttgccgcgcc
     3661 cactccaata cgcgactcga gctcacggtc agcgacgacg gccgcggcat cgatcgtcag
     3721 gcggtcgcgc gcaaagcagc caaacccgtg cccgaaagcg acgcggcgct gctcgaactc
     3781 ttgtgcatgc cgggcctgtc gacgcg
//
LOCUS       DATIML010000955         1521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2512153, whole genome shotgun sequence.
ACCESSION   DATIML010000955 DATIML010000000
VERSION     DATIML010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2512153"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..498)
                     /locus_tag="VLJ38_16530"
     CDS             complement(<1..498)
                     /locus_tag="VLJ38_16530"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU41187.1"
                     /translation="MTAPLPASSLNGRVALVTGGARGIGLAISRRLHALGASVLLADS
                     GVSIAGDEPDPTIAEAAATELGPRAAAFTDDIATAATAEAAVALAVARFGGIDLVVNN
                     AAILRDAFIFKAQPAAWDAVLRTNLSAAFYVLAAATPRLREQAKAGRAPGRIVNITSS
                     AGLYGN"
     gene            complement(509..1492)
                     /locus_tag="VLJ38_16535"
     CDS             complement(509..1492)
                     /locus_tag="VLJ38_16535"
                     /inference="COORDINATES: protein motif:HMM:NF006015.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSU41188.1"
                     /translation="MKPPEKTKSTSGRAAARAKGTAGSPRAPVVQGKLVTDVNEGELH
                     ALLGQRVRDARARRFMTRKALAEDSGISLAYLARVEGGTGNISLGLLQRLALALNLPI
                     ESFFTSAEVPNADFALIVEFLKRQPPERLAQIRQQLLEGEGGGQRIALIGIRGVGKST
                     LGPLLAERLGIPFVELNREIEAEAKLAVSEIFTLYGQHGYRVLERSCLERIIAAYPDV
                     VLATGGGIVAEAATYELLLTSFFTIWLKAKPRVMFERVLAQHDARIASAQLRDEAVEN
                     IERTLDARRPLYELAHASLDTSGKALGQIVPALLALLPRTKRPLLARTNPE"
BASE COUNT          237 a          503 c          534 g          247 t
ORIGIN      
        1 gttgccgtac agacccgccg acgacgtgat gttgacgatg cggcccggcg cgcgcccggc
       61 tttcgcctgt tcgcgcagcc gaggcgtcgc cgcggcgagc acgtaaaacg cggcgctcag
      121 attggtcctg agcacggcgt cccaagccgc gggctgcgct ttgaagatga aggcgtcgcg
      181 cagaatggcg gcgttgttca cgaccaggtc gatgccgccg aagcgcgcga cggcgagcgc
      241 cacggcagct tccgccgtgg cggcggtcgc gatgtcgtcc gtgaacgccg ccgcgcgtgg
      301 gccaagctcg gtagctgccg cttcggcgat ggtcggatcc ggttcgtcgc cggcgataga
      361 gacaccgctg tccgcgagca gcacgctcgc gccgagcgcg tggagccgcc ggctgatggc
      421 gagaccaatc ccgcgcgcgc ccccggtgac gagcgcgacg cgtccattca gcgaactcgc
      481 aggcagaggg gcggtcacgg cttacctcct attccggatt cgtgcgcgcc aagagcgggc
      541 gtttggtgcg cggcagtaag gcgagcagcg ccgggacgat ctgcccgagc gccttgccac
      601 tcgtgtcgag cgacgcgtgc gcgagctcgt agagcggacg gcgagcgtcg agcgtgcgtt
      661 cgatgttctc gacggcctcg tcgcgaagct gcgcgctcgc gatacgagcg tcgtgttgcg
      721 cgagcacgcg ctcgaacatg acgcgcggct ttgccttgag ccagatcgtg aaaaacgagg
      781 tgagcaagag ctcgtacgtg gctgcttcgg ccacgatgcc gccgccggtc gcgagcacga
      841 cgtcggggta cgctgcgatg atgcgctcga ggcagctacg ctcgagtacg cgatagccgt
      901 gctggccgta cagcgtgaag atctcgctca cggcgagctt cgcctcggcc tcgatttccc
      961 ggttcagttc gacgaaagga atgccgagac gctcggccaa gagcggtccc agcgtggatt
     1021 taccgacgcc gcggatcccg atcagggcaa tgcgctgtcc gccgccttcg ccttcgagca
     1081 actgttggcg aatctgagcc aaacgctcgg gcggctggcg cttgagaaat tccacgatca
     1141 gcgcgaagtc ggcgttgggc acctccgccg aggtgaagaa actctcgatc ggcaggttca
     1201 acgcgagcgc cagccgctgc agcaggccga gcgagatgtt gccggtgcca ccttcgacgc
     1261 gcgcgaggta cgcgagcgaa atgcccgaat cctcggccaa cgccttgcgc gtcatgaagc
     1321 gccgcgcccg agcgtcgcgt acgcgctggc cgagcagggc gtggagctca ccctcgttca
     1381 cgtccgtgac gagcttgccc tgcacgacgg gcgcgcgcgg gctccccgcc gtgcccttgg
     1441 cgcgcgccgc agcgcgtccg ctcgtgctct tggttttctc gggtggcttc atcgggcaag
     1501 tatgttcagc gcggtgccat c
//
LOCUS       DATIML010000956         2809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1071235, whole genome shotgun sequence.
ACCESSION   DATIML010000956 DATIML010000000
VERSION     DATIML010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071235"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VLJ38_16540"
     CDS             <1..463
                     /locus_tag="VLJ38_16540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HSU41189.1"
                     /translation="DGADAFLLGRGTYQIFAGHWPRVTDPTDPIASRLNQLPKHVATK
                     TLERLSWSGSSTVRDVASEVPALARAYRRELQVHGSPGLIQTLLSLELIDRMHLIVFP
                     LTLGTGKRLFGEGSSPSAFKLVSSQTTTTGVVIATYERNGRPAYGSFALEG"
     gene            1046..2317
                     /locus_tag="VLJ38_16545"
     CDS             1046..2317
                     /locus_tag="VLJ38_16545"
                     /inference="COORDINATES: protein motif:HMM:NF019140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSU41190.1"
                     /translation="MASAAVVGFEDVHTAVSWRRAHEELLRLSAKRAGLDFEEGRWLL
                     RAFRSGAHRELGYGSFHEYTERLFGYGPRLTNDKLRVAEALEALPETAEELRAGTFSF
                     SAVRELTRVAVPATEREWLQAARGRTVREVEELVSGHRAGSRPSDVPDASARRHVLRF
                     EVSGEALASFREAMAKIRREAGEALDDDAAILLLSRSVLEGVRDEARSSYQMALTVCE
                     RCRQGQQQGRGELVQVSQAVVDMAECDGQHIGHVAVEPDVGMNAHVGTHSGAPKKPTR
                     ATQTIPPALRRQVLRRDGGRCQVPGCQHATFVDVHHLRPRCEGGANTLENLVTLCGAH
                     HRASHAGKLLSAGTPSEGLTFLHADGTPYGHAPSPAIAELRSSAYRALTHLGFRESEA
                     KWALARASFAANVTLEDLIRQTLRELARDRH"
BASE COUNT          462 a          980 c          916 g          451 t
ORIGIN      
        1 cgacggcgcc gacgcgttct tgctcgggcg cggtacgtac caaatcttcg cgggccattg
       61 gccacgtgtc accgacccga ccgatccgat cgcgtcgcgc ctgaaccagc tgccgaaaca
      121 cgtcgctacg aagacgctcg agcgactcag ctggagcggc tcgagcaccg tgcgcgacgt
      181 ggcgagcgag gtccccgccc tcgcgcgtgc gtaccgccgt gagctccagg ttcacggcag
      241 cccagggctg attcagacgc tactttcgct cgagctcatc gaccgcatgc acctcatcgt
      301 cttcccgctc acgctcggta cgggcaagcg tctcttcggc gaagggagct ccccctcggc
      361 gttcaagctc gtgagctcgc aaaccacgac gacaggcgtc gtcatcgcaa cctacgagcg
      421 caacggtcgg cccgcgtacg gctccttcgc gctcgaaggc taacccttcg cacgcggacg
      481 gctccgggcg cgcgcacctg tcatgctcat gctgctagac taatgtgtgc agtcgggcgt
      541 gcggggcccg cgttcccgcg agtgggatgg ccgaagaggc cgtccgcagc caagcacagc
      601 tgccgctcgg accggcgcgt tgagctgacg ttttcgtgtt tggggaatga gctgcccccg
      661 cgtggtccga ctccgcacgt cctgcgtgct cggccttcag cctccgcgcg caggcgcccg
      721 ccaagcgccc gcttcgcggt cgcgggggcg cggcggcatc gggacggaac acgaaagacg
      781 cagcgagctc gcgaacggct gaaagagcac gtgttccgtc gatttgtgtg gacaggtttc
      841 gaccgacgaa gtgcgcgcgt ccgttcgacg agctctgcat agcgtcgtcg tgctcgtctg
      901 ttcgatggag cgcgcgtttc gcggcgccgg cgagtcgacc gcggtccgag gctcgcaaac
      961 gcgcgtagct cggcgcacgc gaagccgaaa aagtgcgtga tacagcacag cgtgcgactc
     1021 agaaccacga acagggaggg ttgagatggc atcagcagcg gtggtcggat tcgaggacgt
     1081 tcatacggcc gtctcttggc ggcgcgctca cgaagagctc cttcgactct cggcgaagcg
     1141 cgcggggctc gacttcgagg aagggcgctg gctcctgcgg gccttccgct cgggagccca
     1201 tcgcgagctc ggatacggct cctttcacga gtacaccgag cggctcttcg gctacgggcc
     1261 gcgcctcaca aacgacaagc tccgggtcgc tgaggcactc gaagcgctac ccgagacagc
     1321 cgaagagctc agagcgggaa ccttcagctt ctccgcggtg cgggagctca cgcgtgtcgc
     1381 agtcccagcg accgagcgcg agtggctcca agcagcgcgg ggacgcacag tgcgcgaggt
     1441 ggaagagctc gtgtctgggc atcgtgccgg aagtcgcccg agcgacgtcc cggacgcgag
     1501 cgccaggcgt cacgtgctcc ggttcgaggt ttccggcgaa gcgctcgcga gctttcgcga
     1561 agcgatggca aagatccggc gcgaagcggg cgaagcactc gatgacgacg cggccatctt
     1621 gctcctcagt cgcagcgtcc tcgaaggcgt gcgggacgaa gcccggtcga gttatcagat
     1681 ggcgctcacc gtgtgcgagc gttgccggca gggccagcag cagggccgcg gtgagctcgt
     1741 ccaagtgtcg caggcagtgg tcgacatggc cgagtgcgat gggcagcaca tcgggcatgt
     1801 cgctgtcgag ccggacgtcg ggatgaatgc ccacgtggga acccactcgg gcgcaccgaa
     1861 gaagcccacg cgcgcgacgc aaactatccc gcctgctctc cggcggcagg tgctgcgccg
     1921 cgacggcggg cgttgccagg tgcccggctg ccagcatgca acttttgtcg atgtgcacca
     1981 tctccggcct cgctgcgaag gcggagcgaa cacactcgag aatctcgtca cgctctgcgg
     2041 tgcccatcat cgtgcaagcc acgccggaaa gcttttgagc gcagggacac cgtccgaagg
     2101 tctcactttc ctgcacgcgg acggcactcc ttacggacat gcaccctcgc ccgctatcgc
     2161 cgagctacgc tcgagcgcct atcgcgcact cactcacctc ggcttccgcg aatcggaggc
     2221 gaaatgggcg ctcgctcgtg cttcttttgc tgccaacgtg accctcgaag acctaatccg
     2281 acaaacgctg cgcgagctcg ctcgagaccg gcactagcgt tacggctcgc gtgtcggggt
     2341 ggtgcgctcc ggtgtcgctc atcgtgtctg ctcgccgcgc cgtgcgtctc tcgcaattct
     2401 gcgccccgtc gaacccgccc gatgtcgccg cgacgcgaag cgggcgctag gcgggagccc
     2461 gcgcgcgcag gccaccgatg gccgagcatg cgacgggcag cgccgctcgg agcgggagca
     2521 actctcgaat tggcccgctg tggctccgtt ctgagcgccc gttgcgaacg cggagatccg
     2581 acgaatcatc ggccgcagtg cgtgagcacc gcccaacgtg cccccccccg accccaaccc
     2641 ttgctcctca cgctccacaa acgcgcaccg ttcgctcacg ctctcgcgct acctccaccc
     2701 ctgactcccc cagcctcgcc gctctgacgg cgcagcccga ctagcgtttc gcctcccgca
     2761 gcgcctgcac gacaatcgcc cgcatttcgg ggtaggggag cgccccgac
//
LOCUS       DATIML010000957         3365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2802195, whole genome shotgun sequence.
ACCESSION   DATIML010000957 DATIML010000000
VERSION     DATIML010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3365
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2802195"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="VLJ38_16550"
     CDS             <1..588
                     /locus_tag="VLJ38_16550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU41191.1"
                     /translation="SMAFIFMYLILAAQFESWIYPGIILVSLPLTVPFAFISLKLFHQ
                     SINMFSMLGMLVLFGVVKKNSILQVDHTNHLRKLGRSRFDSLMQANRDRLRPILMTTV
                     AFVAGMAPLILSTGIGSGFNKATASIVVGGQTLSLLLTLLAVPVIHSLVDDVLDFFAR
                     RKKRGAIDRGEAELDALLGTGEAPLDKALERAAAE"
     gene            898..1062
                     /locus_tag="VLJ38_16555"
     CDS             898..1062
                     /locus_tag="VLJ38_16555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HSU41192.1"
                     /translation="MLHWAAVFFVIALIAAVFGFGGIAASAVGIAKILFFVFLVLAVV
                     SLLFGRRIST"
     gene            1090..1437
                     /locus_tag="VLJ38_16560"
     CDS             1090..1437
                     /locus_tag="VLJ38_16560"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41193.1"
                     /translation="MLVVDDDDDSRVALTALLEHHGYFAAEAANGAEAVRLLEKGLDP
                     DLILTDLIMPVMSGWDLCETLKRVPGWRAIPLIVLCGMTAEQRGKLQVDDAFEKPTDF
                     TTLLNRITELCGL"
     gene            1425..3182
                     /locus_tag="VLJ38_16565"
     CDS             1425..3182
                     /locus_tag="VLJ38_16565"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSU41194.1"
                     /translation="MRALALSPVVETALVVAILALGRPVFVPVTLAFYLAFILTPPSE
                     RLERLGLPRGVAIASITGAAFSALGVVGVVLVSQAAELAGQMRTYAVQMSAKLSSLHS
                     AQRGVVQDLVNAVSELGRILDSETVKLEDTTPVRVVSGGLSGFERLEQAVGPLLGPVA
                     LSVVIVVMAIFVIGKREDLRGRLIRLVGTQNVTVTTRTMVEAVNRVSHFLLTQACINA
                     GFGTAIAVGLYFIGVPYALLWGALAALLRFVPLLGSAVATLLPTLAAFAIFPGWYHAL
                     FTLGFFFALDLLTANLVEPVVLGKRAGVSPLGLLISALFWAWLWGPVGLVLATPLTVC
                     AAVVGRHVPRLAFLTTLLGDEPGLRPSVEFYQRILAKATRDAQRLAKSQVTETSLGET
                     LEELVVPALGLMLLDQNQQTIGPSAAARVVKDMSDIVSRLSATTTASAPPVHSRKIVA
                     IPAESDADQLLLELLALTLAGHAPLVRLAHASRANSVAAAIEEQPDVVCIAAYPPSGS
                     ANARYLCRRLRAALPDARLLVLAPDAVNSRSKEAAARFREAGANDVVYGLREASELLL
                     AAKPETAAKSARAPQPAIA"
BASE COUNT          521 a         1110 c         1085 g          649 t
ORIGIN      
        1 agcatggcgt tcatcttcat gtacctgatc ctcgcggctc agttcgaatc ctggatctat
       61 ccggggatca ttctcgtctc gctgccgctc acggtgccgt tcgcgttcat cagcctgaag
      121 ctcttccacc agagcatcaa catgttctcg atgctcggca tgctcgtgct cttcggcgtc
      181 gtgaagaaga acagcatttt gcaggtcgat cacacgaacc atctgcgtaa gctcggtcgg
      241 agtcgcttcg attcgctcat gcaagccaat cgcgaccgct tgcggccgat cttgatgacg
      301 accgtcgcgt tcgtggccgg catggcgccg ctgattctct cgacgggtat cggctcgggc
      361 ttcaataagg ccacggccag catcgtcgtc ggcggccaga cgctctccct actgctcacg
      421 ctgctcgccg tgccggtgat ccacagcctc gtcgacgacg tgctcgactt cttcgcccgc
      481 cgcaaaaagc gcggcgcgat cgaccgcggc gaagcggagc tcgacgcgct actcggcacg
      541 ggcgaggcgc cgctcgacaa agcgctggaa cgcgccgccg ccgagtgaac gtcgctccgc
      601 cgagcgaacg ccgcccgcaa gcccgaggtt ccgggctgta gcgggcggcc gcagcaacaa
      661 gaagcgccac tcgatcgagg cagattgcca tggcgtgaag caaaatggcc gcacatcacg
      721 gcccgcgcct tgcgcaaagc tcgagcccgc gcctatttcg agcgggcatt tcggcgagcc
      781 acgggcagtt tttcgcgcgg agtttgacgc ctcgagcggt ctcgggcgcg tggcacgctt
      841 tctgctcttg cctcgctgcc acggggacac acccccgcgg agacaagagg aaataccatg
      901 cttcattggg ctgccgtttt tttcgtgatc gcgctgattg ctgccgtctt cggcttcggc
      961 ggtatcgccg cgagcgccgt gggaatcgcc aagatcctgt tcttcgtgtt cctcgtgctc
     1021 gccgtggtct cgctgctctt cggccgccgc atttccacgt agcgttcgtt ggcgcacaac
     1081 ggctgcaaag tgttggtcgt cgacgatgac gacgacagtc gcgtggcgct cacggcgttg
     1141 ctcgagcacc acggctattt cgcggctgag gcggcgaacg gcgccgaagc ggtccgactg
     1201 ttggaaaagg ggctcgaccc cgatttgatt ctcaccgacc tgatcatgcc ggtgatgagc
     1261 ggctgggacc tgtgcgagac gctgaaacgg gtcccaggct ggcgcgccat cccgctgatc
     1321 gtgctgtgcg ggatgaccgc cgagcagcga ggtaaactgc aggtggacga cgcgttcgag
     1381 aagccgaccg atttcacgac gctgctcaac cggatcaccg agctgtgcgg gctctagccc
     1441 tgagtcccgt cgtcgagacg gcgctcgtcg tcgcgatctt ggcgctcggt aggccggtgt
     1501 tcgtgcccgt cacgctcgct ttctacctgg cgttcatcct gacgccgccc agcgagcggc
     1561 tcgagcggct cggtctgccg cgcggcgtcg ccatcgcgag catcacgggc gctgcttttt
     1621 cggcgctcgg cgtcgtgggc gtcgtgctcg tgtcgcaggc ggccgagctc gcgggtcaga
     1681 tgcggacgta cgccgttcag atgagcgcga agctcagctc gctccattcg gcccagcgcg
     1741 gggtcgtgca agacctcgtc aatgccgtct cggaactcgg gcgcattctc gatagcgaga
     1801 ctgtcaagct cgaggacacg accccggtgc gcgtcgtgtc cggcggactc tcgggtttcg
     1861 aacggctcga gcaggcggtg ggtccgttgc tcggtcccgt cgcgctctcg gtcgtcatcg
     1921 tggtgatggc aatcttcgtg atcggcaaac gcgaagactt gcgcggacgc ttgatccgtt
     1981 tggtcggcac gcagaacgtg acggtgacca cacgcaccat ggtcgaggcg gtcaatcgcg
     2041 tcagccactt cttactgacg caggcctgca tcaacgcggg cttcggaacg gccatcgccg
     2101 ttggcctcta tttcatcggc gttccgtacg cgctgctttg gggcgcgctc gctgcgttgc
     2161 tgcgcttcgt gccgctgctc ggctccgccg tcgccaccct gctgcccacg ctggccgcct
     2221 tcgccatttt tccgggctgg tatcacgcgc tgttcacgct cgggttcttc ttcgccttgg
     2281 acctgctcac cgcgaacctc gtcgagccgg tcgttctcgg caagcgagcc ggtgtgtcac
     2341 cgctcggact cctgatctcc gcgctctttt gggcttggct gtggggaccg gtcggcttgg
     2401 tgctggcgac gccgctcacg gtctgcgcgg cggtcgtcgg cagacacgtc ccccggctcg
     2461 catttttgac cactctgctc ggcgacgagc ccggcctaag accctcggtc gagttctatc
     2521 aacgcatctt ggccaaagcg acgcgagacg cgcaacgact cgcaaaaagc caagtcaccg
     2581 agacatcgct cggcgaaacg ctcgaggagc tcgtcgttcc cgcgctcggt ctgatgctgc
     2641 tcgaccagaa ccagcaaacg attggaccga gcgccgcggc gcgtgtcgta aaggatatga
     2701 gcgacatcgt gagccgcctg tcggcgacga cgacagccag cgcgccgccc gtgcattcgc
     2761 gaaaaatcgt cgcgatccct gcagagtcgg acgccgacca gctactgctc gagctcttgg
     2821 ccctgacgct cgcgggtcac gcgccgctcg tcaggctcgc gcacgcgtcg cgggcaaatt
     2881 ccgtggcggc cgcgatcgag gagcagccgg acgtcgtctg tattgccgct tatccgccga
     2941 gcggaagcgc caatgcccgt tacctatgcc ggcgcttgcg cgcggccttg ccggacgctc
     3001 ggctgttggt gctcgctccc gatgcggtca actcgcgttc caaagaggca gcggcgcggt
     3061 ttcgggaagc gggcgcgaac gacgtagttt acgggctgcg cgaagcgagc gagcttctgc
     3121 tcgcagcgaa gccggaaaca gccgcaaaat ccgcacgggc cccgcaaccg gccatcgcgt
     3181 gaacggcttc gcaaagttgt gtgcgcgggc tcgatgacaa aaggcgtcac cgcgactagg
     3241 cttttgacgg tggacgcgcc gcgtagggcg attttctcgg gagacggcgt agcgcgagag
     3301 acggcgcgcg ccgtggattg gtcgcagacg ccggtcggcg cgaccgaaag ctggcccgtc
     3361 agtct
//
LOCUS       DATIML010000958         2664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_493624, whole genome shotgun sequence.
ACCESSION   DATIML010000958 DATIML010000000
VERSION     DATIML010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493624"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VLJ38_16570"
     CDS             <1..262
                     /locus_tag="VLJ38_16570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HSU41195.1"
                     /translation="SILHAKSAVIDGRWSTIGTFNLDYLSLRSNLEVNASIDDEVFGA
                     VMEGSFLRDLEESREIDRQAFFYRPLGERLLELVAYRFRKFL"
     gene            259..1431
                     /locus_tag="VLJ38_16575"
     CDS             259..1431
                     /locus_tag="VLJ38_16575"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSU41196.1"
                     /translation="MTEARDAREATYEIRTHGSVRELGEAAYRALLEPATPPFLRYEW
                     LDALERTGCVTPKRGWLPMHVGIYEHGALVAAAPAYVKGNSEGEFVFDHAWARFAEAE
                     LGIAYYPKLIVAVPFTPATGPRLLVKAGREREALTQVLSQALAGICKQAKLSSAHILF
                     PTPAESALYTEHGLLARHGVQYHWHNPGYASFDDFLARFNAKKRHQIRRERRELEDRD
                     IVLDVLSDDTLGPEQADFIYDFYVATVDKFPWGRRYLNRAFFEQVCSSMPEALHVVAA
                     RERGSNKRLGGAFNLLGKERLFGRYWGALAEVPFLHFNVCFYKGVEEAIARKLGAFEP
                     GAGGEHKVARGFEPTVTHSAHFLADRRLRDAIARHLVAERTAVDEHVSEAEPVLKP"
     gene            complement(1747..2418)
                     /locus_tag="VLJ38_16580"
     CDS             complement(1747..2418)
                     /locus_tag="VLJ38_16580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41197.1"
                     /translation="MTPWFLLAALAREPAQAEPAFGRRTTAQVHSVDPDSDHHHGDGA
                     YGRFDGDLDLGLGVGPALAFSNGQMSVQVRGVARWYYSAGLYVAYGETLTPHPDIERR
                     LGFGLELTPLFLLRWRKAQERGPAVFDLALDSLALGLGASLATEHGHEFGNRHAFEGS
                     LGFGMPLAGTAPGPWLEFRATTTLPKPVAGEAQLFLLLSWHFAVVTPIVTTHEPRVEE
                     TESAR"
     gene            complement(2415..>2664)
                     /locus_tag="VLJ38_16585"
     CDS             complement(2415..>2664)
                     /locus_tag="VLJ38_16585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSU41198.1"
                     /translation="RARDVARAAGLDPEIYVGLDIASTVVLDDAADPLTIVFPDGAVR
                     SLAEVSFLLGRLRGERMERIRLVFAPELRDSIKRALKS"
BASE COUNT          449 a          886 c          906 g          423 t
ORIGIN      
        1 gagcattttg cacgcgaaga gcgccgtcat cgacgggcgc tggagcacga tcgggacgtt
       61 caatctcgac tatttgtcgc tgcgctcgaa cctggaggtg aacgcgtcga tcgacgacga
      121 ggtgttcggc gccgtgatgg agggctcctt tttgcgcgac ttggaggaga gccgcgagat
      181 cgaccgccag gccttcttct accggccgct cggcgagcgc ttgctcgagc tcgtggcata
      241 ccgtttcagg aagtttctat gacggaggcg cgcgacgcac gcgaagcgac ctacgaaatc
      301 cgcacccacg gctccgtgcg cgaactcggc gaggccgctt accgcgcgct gctcgagccg
      361 gcgacgccgc cgttcttacg ttacgagtgg ctcgacgcgc tcgagcggac gggctgcgtc
      421 acgccgaaac gcggctggct gcccatgcac gtcggcatct acgagcacgg agcgctcgtc
      481 gcagccgcgc ccgcgtacgt gaaaggcaac agcgaaggtg agttcgtctt cgaccacgcg
      541 tgggcgcgct tcgccgaggc ggagctcggc atcgcgtatt atccgaagct catcgtcgcc
      601 gtgccgttca cgcctgcgac gggcccgcgc ctgctcgtca aagcgggccg cgagcgcgaa
      661 gcactgactc aggtgttgag ccaagcgcta gccgggatct gcaaacaggc gaagctctcg
      721 tccgcgcaca tcctattccc gacgcccgca gagtccgcgc tctataccga gcacggcctg
      781 ctcgcgcgcc acggtgtgca gtatcactgg cataaccccg gctacgcgag cttcgacgac
      841 tttctggcgc gtttcaacgc gaagaagcgg catcaaatcc ggcgcgaacg ccgcgagctc
      901 gaggatcgcg acatcgtgct cgacgtgctc agcgacgaca cgctcgggcc cgagcaggcc
      961 gacttcattt acgatttcta cgtcgccacc gtcgacaagt tcccgtgggg gcgccgctac
     1021 ctcaaccgcg cgtttttcga acaggtgtgc agcagcatgc ccgaggcgct gcacgtcgtc
     1081 gcggcgcggg aacgcggcag caacaagcgt ctcggcggcg ccttcaacct gctcggcaaa
     1141 gagcgcctct tcggtcgcta ttggggcgcg ctcgcggagg tgccgttcct ccacttcaat
     1201 gtctgcttct acaagggcgt ggaagaagcg atcgcgcgca agctcggcgc cttcgagccc
     1261 ggcgcgggcg gcgagcacaa agtggcgcgc ggcttcgagc cgaccgtcac gcacagtgcg
     1321 cattttctcg ccgaccgccg cctgcgcgac gccatcgccc gccacctcgt cgccgaacgc
     1381 accgccgtcg acgagcacgt gtccgaggcg gagcccgtgc tcaagccgta gcactacttc
     1441 gccagtctcg gcatggtcag atcacgatcg gcagatgtgg ccatgaccca cgtaacgaga
     1501 ccggcgaggc cggtggacgg ccgtccttcc gcacgacatt gtcgccattc ttttcgttcg
     1561 ccgtctgggt gatggtctca gttggtcgga tgccgttggg ctcgccttcg gattgacgga
     1621 gcgcccggcg accctggcga gctcacgcgc ggcggtccgc cggcctcgcc ggtcttctac
     1681 gtggcgcatg gctacccacg ccgatcgtga tctgctcctg ccaaagactg gcgaagcagt
     1741 actgactcag cgcgcgcttt cggtttcttc gacccgcggc tcgtgcgtcg tgacgatcgg
     1801 cgtgacgacg gcgaagtgcc acgaaagcag caggaacagc tgcgcttccc ccgcgacggg
     1861 cttgggcaac gtcgtcgttg cgcgaaactc gagccagggg ccgggcgccg tgcccgcgag
     1921 cggcatgccg aagccgagcg agccctcgaa agcgtggcgg ttgccgaact cgtggccatg
     1981 ctcggtcgcg aggctcgcgc cgagtccgag cgccagggag tcgagcgcga gatcgaaaac
     2041 ggccgggccg cgctcctggg ccttgcgcca gcgcagcaag aagaggggcg tgagctcgag
     2101 gccgaagccg agccgccgct cgatgtccgg gtgcggcgtg agcgtctcgc cgtaagcgac
     2161 gtagagaccg gccgagtagt accagcgcgc aacgccgcgc acttgcacgc tcatctgacc
     2221 gttcgaaaag gcgagcgcgg gtcccacgcc gagtccgaga tcgaggtcgc cgtcgaagcg
     2281 gccatacgcg ccgtcgccgt ggtgatggtc ggagtcgggg tcgaccgaat gaacctgagc
     2341 ggtcgtgcgg cggccgaacg cgggttcggc ctgcgccggc tccctcgcga gcgccgccaa
     2401 gagaaaccaa ggggtcatga tttgagtgcg cgcttgatgg aatcacggag ctcgggcgcg
     2461 aacaccagcc gaatccgctc catgcgttcg ccgcggaggc gtccgagcaa gaacgacact
     2521 tcggcgagcg agcgcaccgc gccgtccgga aagacgatcg tgagcggatc ggcggcgtcg
     2581 tcgagcacga cggtggaggc gatgtcgaga ccgacgtaga tttcggggtc gaggccggcg
     2641 gcgcgagcga cgtcgcgcgc gcga
//
LOCUS       DATIML010000959         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2513061, whole genome shotgun sequence.
ACCESSION   DATIML010000959 DATIML010000000
VERSION     DATIML010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2513061"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..149
                     /locus_tag="VLJ38_16590"
     CDS             9..149
                     /locus_tag="VLJ38_16590"
                     /inference="COORDINATES: protein motif:HMM:NF019886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HSU41199.1"
                     /translation="MSSPEIAALLEVPLGSVASRLRRGREQFRDAVARIERNLRALPR
                     RP"
     gene            146..901
                     /locus_tag="VLJ38_16595"
     CDS             146..901
                     /locus_tag="VLJ38_16595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41200.1"
                     /translation="MSDKELRLTQSSGATELERRLLEAAGREQPSRELSERMAKAIGV
                     SMPGAGGAPITTNATSQVPKAATAPSSSLPWVAGALASAVVVVGVAMFTRSNSRQLAA
                     VSTATSVGAPLKTAERAASSPVPVAPTSVTASSGKALQQEPEIRRAPSAQRAGERTAK
                     SDLSDQLAVVDAAHRALTGGDAAGALTLARKYQAEYPTGTFRPEAAAIRIEALGKLGR
                     TAEAQALAGNFAKTYGPGPLADRIAALAGTTQQ"
     gene            complement(940..1401)
                     /locus_tag="VLJ38_16600"
     CDS             complement(940..1401)
                     /locus_tag="VLJ38_16600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41201.1"
                     /translation="MPGVALYASASTERWGPLSPGVFLGLSHAWRSSVEAPGGTASFF
                     LDAVSLDACPVRVRLSVFEVWPCASALGGRFSARGAETQNAPDERVRPFWVLGGAVAA
                     NVVLVWQLEASMRLGVGANLVRDSFEFTPVVFHTVAPVTVAASLGLGVRSR"
     gene            1400..>1627
                     /locus_tag="VLJ38_16605"
     CDS             1400..>1627
                     /locus_tag="VLJ38_16605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41202.1"
                     /translation="MTPGVGPAKSWPASENPKRLRLAAPEDGTLFGTGGISVVFVPSA
                     GRDSFGFTGGCVRDVPSVEPFFELRVLGSPAA"
BASE COUNT          284 a          565 c          569 g          209 t
ORIGIN      
        1 tcgaggggct gtcgtcgccc gagatcgccg ccctgctcga ggttccgctc gggagcgtgg
       61 cttcccgcct gcgccgagga cgcgagcagt tccgcgatgc cgtcgcgcgc atcgaacgaa
      121 acctgcgagc tctgccgagg cggccatgag tgacaaagag ctcagactga cgcaaagctc
      181 cggagcgact gagctcgagc ggcgattgct cgaggctgcc ggccgagagc agccgtcgcg
      241 cgagctgtcg gagcgcatgg cgaaggcgat tggtgtttcg atgcccggcg ccggcggagc
      301 gccgatcacg acgaacgcta cctcccaggt gccgaaggcg gcgaccgcgc cgagttcgag
      361 cttgccgtgg gtggcggggg cgctcgcctc ggccgtcgtg gtggtgggcg tggccatgtt
      421 cacgcgctcg aactctcgac agctagcggc tgtgtcgacc gccacgagcg tgggagcgcc
      481 tctcaagaca gcggagcgcg ccgcaagctc ccccgtgccc gtcgcgccga catccgtcac
      541 ggcgtcttcc ggcaaagcgc ttcagcaaga accggagata cgccgggcgc cctctgcgca
      601 acgtgccggc gagcgcacgg cgaagagcga tctcagcgat cagctcgcag tggtcgacgc
      661 agcgcaccgt gcgctgacgg gcggtgatgc agcgggtgcg ctcacactag cgcgcaagta
      721 ccaagcggag tatccgaccg gcaccttccg cccagaagcg gcggctatcc gcatcgaggc
      781 gctcggcaag ctcgggcgaa ccgcggaagc gcaggctctg gccggcaact ttgcaaaaac
      841 ctacggaccc gggccgctcg cggaccgcat cgcagcgctc gcaggcacga cgcaacagta
      901 ggtacgaatg caggcttcac acgcgctaga aagaggccat cagcgcgagc gcacgccgag
      961 gccgaggctt gcggcgacgg tgacaggagc aacggtgtgg aagacgaccg gtgtgaactc
     1021 gaacgagtcg cgcacgaggt tcgccccgac gccgagccgc atggacgcct cgagctgcca
     1081 gacgagcacc acgttcgctg ccaccgcgcc gccgagcacc caaaacggtc gcacccgctc
     1141 gtccggcgcg ttttgcgtct ccgcgccgcg agcggagaag cgaccgccga gcgccgaagc
     1201 gcagggccac acctcgaaaa cggaaagcct gacgcgcacg ggacacgcgt cgagactcac
     1261 ggcgtcgaga aagaaggacg ccgtgccgcc cggcgcttcc acgctcgaac gccaggcatg
     1321 gctcagtccc aggaacaccc ctggcgagag cggcccccac cgctcggtgc tcgcggaagc
     1381 atacagcgcg acgcccggca tgacgcccgg cgtcggcccg gccaagagtt ggccagcaag
     1441 cgaaaatccg aagcggctcc ggctggctgc gccggaggac ggaacgctgt tcggcacggg
     1501 cggcatctcg gtcgtgttcg ttccgagcgc gggccgcgac tctttcggct tcaccggcgg
     1561 ctgcgtgcgc gacgtgccgt ccgtggagcc gtttttcgag ctccgcgtgc tcggctcgcc
     1621 ggcagcc
//
LOCUS       DATIML010000960         5425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5406655, whole genome shotgun sequence.
ACCESSION   DATIML010000960 DATIML010000000
VERSION     DATIML010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5425
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5406655"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VLJ38_16610"
     CDS             <1..518
                     /locus_tag="VLJ38_16610"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU41203.1"
                     /translation="LTTIAVDVALLDVRMPHTTGVEILAALERMASRPPCILLTTFDD
                     DAVAIEAIKLGARGFLLKDISLEQLADAVRTVAAGGTLINPAITERVVRGLARLASSV
                     PAAPLPVALTKRELDVLRLIAAGQSNREISVALGTVEATVKNQASSIFSKLGVRDRTR
                     AVLRAIELGVL"
     gene            complement(742..813)
                     /locus_tag="VLJ38_16615"
     tRNA            complement(742..813)
                     /locus_tag="VLJ38_16615"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(779..781),aa:Gly,seq:gcc)
     gene            complement(1041..2957)
                     /locus_tag="VLJ38_16620"
     CDS             complement(1041..2957)
                     /locus_tag="VLJ38_16620"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41204.1"
                     /translation="MADGDAASDEDVPEDLRPEDVATAAQSTQRRAKPPSSAPPAIDI
                     QMADLEDSMLAFVPDGTESAPPVSQPASDPYLGKIIAERYFVERLLGVGSMGLVYRCR
                     HAVLDKTVALKIIRQDLAQDEETVGRFMTEARSASAIGSEHIVEVLDFGTLSDGASYI
                     VMEYLEGLTLGEALDAQGGLSLGDSLDIAIQMSEALGAAHAAGVVHRDLKPDNVFLLQ
                     AAGGFFVKILDFGIAKIMQGGQKLTVAGSVIGTPHYMSPEQATGARTDARTDVYSLGV
                     IMYEMACGKVPFDAENPLAVISMQVTDEPPPLRKRMPPGRTLPQGLEAVIHKCLAKDT
                     TERFSTMEDVRAALQRIAGGGVPLVAPPSSQDTSADSYIDELNHDTDFRELHAGGRRR
                     RWVARGAILMLFGAAGAGAFFVLKPRISALAAAVPTAMNTLTAAAQADPTNPAAPSAA
                     TQNTVLGSAAVPGTGTPNAAPAPAAAAAADASVIHVALILFPLNAHVVDGDKDLGMMP
                     ITIDVKPGETKVVNVVRKGYVTRPLKLDGTRTRIVVGLVSNAAAAKRHGKSLDEAVAE
                     ADRAAATLAADDADVVPAAGSKVARATRGAETTRGAETTKVSAAEKTDVATAAPVKPR
                     SAVGKTLAPNPFGD"
     gene            3322..3756
                     /locus_tag="VLJ38_16625"
     CDS             3322..3756
                     /locus_tag="VLJ38_16625"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSU41205.1"
                     /translation="MLTRWNDFGVFPSLGFRDYPRLARDLDRLLFAFDRPQNFSPRVA
                     FEERENAWVLRSELPGFSEKEIDITVTGSTVTLRVQRKTEDKTEGDKAQAQASYVFER
                     AFELPTKVDPEKVEAELKLGILTVNLPKASEAMPKQISVKAG"
     gene            4015..>5425
                     /locus_tag="VLJ38_16630"
     CDS             4015..>5425
                     /locus_tag="VLJ38_16630"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238129.1"
                     /note="catalyzes the interconversion of alpha-D-glucose
                     1-phosphate to alpha-D-glucose 6-phosphate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucomutase, alpha-D-glucose
                     phosphate-specific"
                     /protein_id="HSU41206.1"
                     /translation="MAHPLAGKPAPANLLLDVEALLAAYFSGRPDPAVATERVSFGTS
                     GHRGSAFATAFNEAHILAITQAICEYRQAQGTTGPLYLAKDTHALSAPAERTALEVLA
                     ANGVNVLLQQGDGYTPTPALSLAIIEHNRGRTTGLADGIVVTPSHNPPEDGGFKYNPP
                     HGGPADTDATQWIETRANELLANGASGVRRVAFEQARGASTTGSVDFVAIYLRELPKI
                     LDLAAVRAAGTKLGVDPLGGASVGYYPRIAETFGLNLEVVNPNVDPRFAFMPLDHDGR
                     IRMDCSSPYAMAGLVKLADRFAVAFANDTDADRHGIVVPGTGVMNPNHYLSVAIDYLF
                     RTRTGWPADAAVGKTVVSSALIERVARSLGRPVVEVPVGFKWFVPGLMSGALGFGGEE
                     SAGASFLRFDGSVWTTDKDGILLALLAAEITAKTGKDPGKYYEELAQKLGRPYTTRID
                     APATPEQKAALKKLNPDAVT"
BASE COUNT          885 a         1926 c         1693 g          921 t
ORIGIN      
        1 tcctgacgac gatcgccgtc gatgtcgcgc tcctcgacgt ccgtatgcca cacacgaccg
       61 gtgtcgagat tctcgccgcg cttgaacgca tggcgtcacg tccgccctgc atcctcctca
      121 ccacgttcga cgacgacgcg gtcgcgatcg aagcaatcaa gctcggcgct cgcggcttcc
      181 tcctcaaaga catctcgctc gaacaactcg ccgatgccgt gcgcaccgtc gcggcgggag
      241 ggacgctcat caaccccgcc atcaccgagc gcgtcgttcg cggcctcgct cgcctcgcga
      301 gcagcgttcc cgccgcgccc ctccctgtcg cgctcaccaa gcgcgagctc gacgtcctgc
      361 gactcatcgc cgcaggacag agcaatagag agatctccgt cgcgctcggc accgtcgaag
      421 cgacagtgaa gaatcaagcg tcgagcatct tcagcaagct cggggtacgt gaccggaccc
      481 gcgcggtgct ccgcgccatt gagctcgggg tcctctgaaa caaccggaaa agcggcgctg
      541 cgcccgaaat cgccccggtc tcgaggaagc ggacggccgc agcagccggc gcccggagtt
      601 gcacggactc tgaagggcac agcggttgac gtctgataga cgcgacgccg ccgccgcagg
      661 cggcgcaccc tcggcgcgag accgtcgtga aaacacgacg caccaagcaa aaagccggcc
      721 ccctggaagg ggccggcttt gagcgggaga agagattcga actctcgacg tccaccttgg
      781 caaggtggca ctctaccgct gagttactcc cgcgaaagag ccggcggtgt acctcccgcc
      841 gcgagacgtg tcaagcgtgc gcccccgttt cgtgcgtctt ttggcccatc tcgcggcaac
      901 ccgttcgctt gcggcccggc ctagcgttcc aaagcggtgg ctcgtcatga acggtcggcc
      961 gtccaacgcg gcgctcccac gacgtcccgc cgtccccacc cgaagagcta gtgctttccg
     1021 ttcgtcacgg cgaggagcgc tcaatccccg aacggattcg gcgcgagcgt cttcccgacg
     1081 gccgagcgtg gcttcaccgg cgccgctgtc gcgacgtccg tcttctccgc cgcgctgacc
     1141 tttgtcgttt ccgcgccgcg cgtcgtttcc gcgccgcgcg tcgcgcgcgc caccttgctg
     1201 cccgccgctg gcaccacgtc cgcgtcgtcc gccgcgagcg ttgccgccgc acggtccgcc
     1261 tccgccacgg cttcgtccag cgacttgccg tgtcgcttag ccgccgccgc gttggaaacg
     1321 agtcctacga cgatgcgcgt cctcgtcccg tcgagcttga gcgggcgtgt gacgtaccct
     1381 ttgcggacga cgttgacgac cttcgtctcg cccggtttca cgtcgatggt gatcggcatc
     1441 atgccgaggt ccttgtcgcc gtcgacgaca tgcgcgttca gcggaaacag gatcagcgcg
     1501 acgtggatca cggacgcgtc cgccgccgca gcggctgccg gcgcaggcgc cgcgttcggc
     1561 gtgcccgtcc cgggcacggc cgcgctaccg agcaccgtgt tttgcgtcgc tgccgaggga
     1621 gcagcggggt tggtcgggtc tgcctgggcg gccgccgtca gcgtgttcat ggccgtcggc
     1681 accgccgccg ccagcgccga gatgcgcggc ttcaacacga aaaatgcgcc cgctcccgcg
     1741 gcgccgaaca gcatcaaaat cgcgccgcgc gccacccagc gccgccggcg cccgcccgcg
     1801 tgcagctcgc gaaaatcagt gtcgtggttg agctcgtcaa tgtacgaatc cgcgctcgtg
     1861 tcttggctcg acggcggcgc gacgagcggc accccgccgc cggcaatgcg ctgcagcgcc
     1921 gcccggacgt cttccatcgt cgagaagcgc tcggtcgtgt ccttcgccag gcacttgtgg
     1981 atgacggctt cgagcccctg cgggagcgtg cgacccggcg gcatgcgctt gcgcagcggc
     2041 ggaggttcgt ccgtgacctg catcgagatc accgcgagcg ggttctcggc gtcgaacggc
     2101 actttaccgc acgccatctc gtacatgatg acgccgagtg agtagacatc ggtccgcgcg
     2161 tcggtgcgcg cgcccgttgc ttgctcgggc gacatgtagt gcggcgtgcc gatgaccgag
     2221 cctgcgaccg tgagcttctg gccgccctgc atgatcttgg cgatgccaaa gtccaagatc
     2281 ttcacgaaga atccgccggc ggcttggagc aagaagacgt tgtccggctt caggtcacgg
     2341 tgcacgacgc cggccgcgtg cgccgcgccg agcgcctcac tcatctggat cgcgatgtcg
     2401 agcgagtcgc cgagtgaaag cccgccctgc gcgtcgagcg cctccccgag cgtgaggccc
     2461 tcgaggtact ccatcacgat gtagctcgcg ccgtcggaca acgtgccgaa gtcgaggacc
     2521 tcgacgatgt gctcgctccc aatcgccgag gccgagcggg cctccgtcat gaaccggccg
     2581 accgtctcct cgtcttgcgc gagatcctgt cggatgattt tgagggccac ggtcttgtcg
     2641 agcaccgcgt gccggcaacg gtaaaccagg cccatcgagc ccaccccgag cagccgctcg
     2701 acgaagtacc gctccgcaat gatcttgccg agataggggt cactcgccgg ctggctcacg
     2761 ggcggtgcgc tctcggtgcc gtcgggcacg aaggcgagca tggagtcttc gaggtccgcc
     2821 atctggatat cgatcgccgg cggcgcggac gagggcggct tggcccgtcg ctgcgtggac
     2881 tgagctgccg tggcgacgtc ttccggtctt aggtcttccg gtacgtcttc gtcgctcgcg
     2941 gcgtcgccgt cagccatcgc tagaacgcga accatgccac ttcttggccc ggagctcaac
     3001 cggcactcag cgcaaacatc aacgattctc agtactaagg tttagtaacc ggtcccaggt
     3061 tgcgacaggc gaaccgctgt tcccgcccgc ctcccgctcg cttgaccccc gcttgcgcgt
     3121 tggctcaccc cttgcgcggc tcggaggccg tgcctacttt ttcgcttgtc caggcgacgg
     3181 cctgaagcct tcggaagcct cggctttcaa tgggcttcct ggggttagcc cgtcgcggcc
     3241 ttgttgcggc cggagtgatc cgggccgcac ggccgaggct cgccttcgct cggacgcaga
     3301 ccctgaaagg agagattcaa catgctcact cgttggaacg attttggtgt tttcccgagc
     3361 cttggtttcc gtgactaccc ccggctcgct cgtgatctcg atcgactgct cttcgccttc
     3421 gaccgaccgc aaaacttctc gccgcgcgtc gcgttcgagg agcgtgagaa cgcttgggtg
     3481 ctccggagcg agctccctgg cttctccgag aaggagatcg acatcaccgt cacgggcagc
     3541 accgtgacct tgcgggttca gcgcaagacc gaagacaaaa ccgaaggtga caaggcccaa
     3601 gcacaggctt cctacgtctt cgaacgcgcc ttcgagctgc ccaccaaggt agacccggag
     3661 aaggtcgaag cggagctcaa gctcggcatc ttgaccgtca acttgccgaa ggcgtcggaa
     3721 gcgatgccga agcaaatcag cgtcaaggcg ggctgaccgc cgccgtccgt tccccgagcg
     3781 agcggacgcg tctcgaacca gcacgccacg ctgcggaccc gatccgtggc gtggcgtttg
     3841 ctttgttttt tgtaggcgac cgaagtgccc cgtgatttcg ggcggcgccg gttcgccacg
     3901 ttccaccgtc cttccgacgt gcggcggctc gacgctgcaa aacgcggctc cgccctcggg
     3961 ccgaactgcg ctacgtcaat ccgagcgctt tcactcggag cgcaccggag cgccgtggcc
     4021 catcctctcg ctggcaaacc cgcacccgca aacctcctgc tcgacgtcga agcgctcctc
     4081 gcggcctatt tttctggccg cccggatcca gcagtcgcta cagaacgcgt gagcttcggc
     4141 acgagcggcc atcgaggctc cgcgttcgcg accgccttca acgaagcgca catcctggcg
     4201 atcacgcagg ccatctgcga ataccgccag gcgcagggca cgaccggtcc gctctacctc
     4261 gccaaggata cccatgcgct ctcggctccc gccgaacgca ccgcgctcga agtcctcgcc
     4321 gccaacggcg tgaacgtgct cctgcaacag ggggacggct acacgccgac ccccgcactt
     4381 tcgctcgcca tcatcgagca taaccgtggt cgcacgacgg gcctcgccga cggcatcgtc
     4441 gtcacgcctt cgcacaatcc gcccgaggac ggcggcttca agtacaaccc cccgcacggc
     4501 ggccccgccg acaccgacgc cacccagtgg atcgagacgc gagcgaacga gctcctcgcg
     4561 aacggcgcga gcggcgttcg gcgcgtggcg ttcgaacagg cgcgcggcgc gagcacgacc
     4621 ggcagcgtgg atttcgtcgc gatttacctg cgcgagctcc ccaaaatcct cgatttggca
     4681 gccgtgcgcg ccgccggcac caagctcggc gtcgatccgc tcggcggcgc gagcgtcggc
     4741 tactacccgc gcatcgccga gacgttcggc ttgaatctcg aggtcgtcaa cccgaacgtc
     4801 gatccgcgct ttgcgttcat gccgctcgat cacgacggac ggatccgcat ggactgctcg
     4861 agtccctacg cgatggccgg tctcgtgaag ctcgccgatc gctttgccgt cgcgtttgcc
     4921 aacgacaccg acgcggatcg gcacggcatc gtcgtgccgg gaacgggggt gatgaacccc
     4981 aatcattacc tttcggtcgc gattgattac ctgttccgca cgcgcacggg ctggcctgcg
     5041 gatgcggccg tgggaaagac cgtggtctcg agcgcgctca tcgagcgcgt cgcgcgctcg
     5101 ctcggacgcc ccgtcgtcga ggtgcctgtc ggattcaagt ggttcgtgcc cggtctcatg
     5161 agcggcgcgc tcggcttcgg cggcgaagaa agcgccggcg caagcttctt gcgcttcgac
     5221 ggcagtgtct ggacgacgga taaagacggc atcctgctcg cgctgttggc cgcggaaatc
     5281 accgcaaaaa ccggcaaaga cccgggaaag tactacgaag agctcgcgca aaaactcggc
     5341 cgaccctaca ccacgcgcat cgatgcgcct gcgacaccgg agcaaaaagc cgcgctgaag
     5401 aaattgaatc ccgatgccgt gaccg
//
LOCUS       DATIML010000961         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1650852, whole genome shotgun sequence.
ACCESSION   DATIML010000961 DATIML010000000
VERSION     DATIML010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1650852"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1616)
                     /locus_tag="VLJ38_16635"
     CDS             complement(<1..1616)
                     /locus_tag="VLJ38_16635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41207.1"
                     /translation="METDPAACSDGRDNDGDGLTDAADPLCWPFSPPVLTRCASLGAQ
                     NISQNFDDPTLSTPEISLFGSGQALAPRAPLLTTRSDGALELSGSGASKSLDSANLSG
                     IALGGSVSGGWSGFELGFAHSILTGTKLEIGLVPSALVPDGRNPVVGPESALVAITLD
                     GSVSPPTIALDIEGRHLTGRLTLPSSCGIAFCNDGWGTTKLVLDDDGFTLTVSSPSMN
                     GVTGTTTLSAPAPVSAQIAPSRLVVWGGGPSDASVGAWIDDLWLRHGGVSPCGVEVPQ
                     VPEAVDVCERSALPVAIGRTVGVARAADGSWCALVSAGEVTADPTRVFAYRSDDGASW
                     RSGDDAVTPNELGVTTDASLTGAALARDDDRKRWLAAVGYRTKEGVELGLSTSDDCEH
                     WDELVMGPELPADAEAPSYVLASGQHQIYFTRPPTDETGRTLWRVSGPSQAKLALEAD
                     PLYEIPAEIRAVAPVTVQRVGASDLVLTFPELSVGGPAGAGLLVGDASGTTWQALPAA
                     AFALSNAIGAAFDSDGVSAAALSFSDRGGVL"
BASE COUNT          278 a          583 c          595 g          248 t
ORIGIN      
        1 agcacgccgc ctcgatccga gaagctcagc gcggccgcac tcacgccgtc gctgtcgaaa
       61 gcggcgccga tggcgttcga aagcgcgaac gccgcggccg gcaacgcttg ccacgtggtt
      121 ccgctcgcgt cacccacgag caggccggct cccgcggggc caccgaccga aagctcggga
      181 aaggtgagca cgagatcgct cgcgccgaca cgctgcaccg tgaccggcgc gaccgcgcga
      241 atttcggcgg ggatttcgta gagtggatcg gcctcgagcg cgagcttggc ctgggacggc
      301 ccggacacgc gccagagcgt tcgtcccgtt tcatcggtcg gcgggcgggt gaagtagatc
      361 tgatgctgcc cgctcgcgag cacgtagctc ggagcctcgg cgtcagccgg cagctcgggg
      421 cccatgacaa gctcgtccca gtgttcgcaa tcgtcgctcg tggagagacc gagctcgacg
      481 ccctccttcg tgcggtagcc gaccgccgct agccagcgct tacggtcgtc gtcacgcgcg
      541 agcgcggcgc cggtcaagct tgcgtccgtc gtcacgccga gctcgttggg agtgacggcg
      601 tcgtcgcccg aacgccagct cgccccgtcg tcggagcggt acgcaaagac acgagtcgga
      661 tcggcggtga cctcgcccgc ggagacgagc gcgcaccagc tgccgtcggc cgcgcgagcg
      721 acgcccacgg tacgaccgat cgccaccggc agcgcgctcc tttcgcagac gtccaccgct
      781 tcaggcactt gggggacctc cacgccgcac ggagagacgc caccgtgccg caaccagagg
      841 tcgtcgatcc acgcaccgac cgaggcgtcc gacggacctc cgccccacac gacgaggcgc
      901 gacggtgcga tttgtgcact cacgggagcg ggagcgctga gcgtcgtcgt gccggtgacg
      961 ccgttcatgc tcggcgagga aacggtcaag gtgaagccgt cgtcatcgag cacgagcttc
     1021 gtcgttcccc agccgtcgtt gcagaacgcg atcccacagg atgaaggtaa ggtgagccgg
     1081 cctgtcaggt gacgcccctc gatgtcgagc gcgatggtgg gcggactgac gctcccgtcg
     1141 agggtgatgg ccacgagcgc ggactccgga cccacgacgg ggttgcggcc gtcgggcacc
     1201 agcgccgaag gcacgagccc gatctcgagc ttcgtacccg tgaggatgct gtgcgcaaag
     1261 ccgagctcga agcccgacca gccgccgctc acactgccgc cgagcgcaat gccgctcagg
     1321 ttcgccgagt cgagcgactt cgaagcgccg ctgcccgaga gctcgagcgc accgtcgctg
     1381 cgcgtcgtga gcaagggcgc gcggggcgcc aaggcttggc ccgagccgaa cagcgagatt
     1441 tcaggagtac tcagggtagg atcgtcgaag ttctggctga tgttctgggc gccgaggctc
     1501 gcgcagcgcg tgagcaccgg tggcgaaaat ggccagcaca gtgggtcggc ggcgtcggtg
     1561 aggccgtcac cgtcgttatc gcggccgtcg ctgcaggcgg cggggtcggt ctccatgcag
     1621 aaaccgtcgc agctcgcatc gtcacaatcg atgcggccgt tttcgtcgtt gtcgaggcca
     1681 tccgagcagc gctccgcgtc gtgc
//
LOCUS       DATIML010000962         2268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1364012, whole genome shotgun sequence.
ACCESSION   DATIML010000962 DATIML010000000
VERSION     DATIML010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1364012"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1766)
                     /locus_tag="VLJ38_16640"
     CDS             complement(<1..1766)
                     /locus_tag="VLJ38_16640"
                     /inference="COORDINATES: protein motif:HMM:NF013276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030599 - pectinesterase activity
                     [Evidence IEA];
                     GO_process: GO:0042545 - cell wall modification [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pectinesterase family protein"
                     /protein_id="HSU41208.1"
                     /translation="MAKMRWYFAQRLGWISCALALGACGSDAGDGAVSQPDGGAAGTH
                     GAGRAGGGGTVGRAGAGGTSGGSAATGGARPSSGGALATNGGAPAGGADTSTSGGTSA
                     AGGRGTVAGTGGRDLGAGGMANVGGPGGGTSAGRGGTSTGGGPMGGRGGTSGTNGGGS
                     AGAAMVGLPDGVTALFPAPNATNLCKDPSLRITFAKPPTFGKSGSVQVLDAAGKVAAS
                     VDLGAQNVTDTIGGQSFTLERRAYIDGNTAVLYLPSKGLAYGQTYSVNVPAGAIVPAG
                     GGSFSLSGSAWRFSTAAAAPSNLASVSVALDGSGAFCSLQGALDALPSSGSASSTVTL
                     APGHYYEVVYFKNKSNLTIHGQSRSDTVILGTNNNDLNPSTKTRALVGADGAQNLIVE
                     NLTIQNLTPQDGSQAEALRLESCTHCSVRDADIRSLQDTLLWSGTLYAKNCFIAGNVD
                     FIWGTGAAYFDHCEIKTVGRSGYVVQARNAASGYGYVFVDSKLTADAGITGSVLARID
                     VSAYPASHVAYVGCAMGSHITRAGWLVTGGSPTSALRFWEYQSTDLDGKPLDVSGRLA
                     GSTQISAAQAATMRDPSAVLGG"
     gene            1833..>2268
                     /locus_tag="VLJ38_16645"
     CDS             1833..>2268
                     /locus_tag="VLJ38_16645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
                     /protein_id="HSU41209.1"
                     /translation="MLRFEHPYAKFLDKVEKPSRYTGAEHGARKKAWDGVVARVCLAF
                     PDIYDIGMSHLGFRMLYKILNDDPRTLAERAYTPWVDMQRELRAHGKLLVSLESARPL
                     VDFDVVGFSLQYELTYTNILSMLELGGIPLRSEHRSDADPLVV"
BASE COUNT          313 a          814 c          765 g          376 t
ORIGIN      
        1 catccgccga gcacggcgct cgggtcgcgc atcgttgcgg cttgcgccgc gctgatctgc
       61 gtcgagcccg cgagccgccc gctcacgtcg agcggcttgc cgtcgagatc ggtgctctgg
      121 tactcccaga agcgcagcgc cgacgtgggg gagccacccg tgacgagcca gccggcgcgc
      181 gtgatgtgcg aacccatcgc gcaaccgacg taggcgacgt ggctcgcggg gtaggcgctc
      241 acgtcgatgc gcgcgagcac gctgcccgtg atgcccgcgt cggccgtgag cttcgaatcg
      301 acgaagacgt aaccgtagcc gctcgcggcg ttgcgcgcct gcacgacgta gccgctcctg
      361 ccgaccgtct tgatctcgca gtgatcgaag taggctgcgc ccgtgcccca aatgaagtcg
      421 acgttgcctg cgatgaagca attcttggcg taaagcgtgc cgctccagag cagcgtgtct
      481 tgcaggctgc ggatgtcggc gtcgcgcacg ctgcaatgcg tacagctctc gagcctgagt
      541 gcttcggcct gtgagccatc ctgcggcgtc agattttgga tcgtgaggtt ttccacgatg
      601 aggttctgag cgccgtcggc gccgacgaga gcgcgcgttt tcgtgctcgg gttcaggtcg
      661 ttgttgttgg tgccgaggat gacggtatcg ctgcggctct gtccgtggat cgtgagattg
      721 ctcttgttct tgaagtagac gacttcgtag tagtggccgg gtgcgagcgt gacggtgctc
      781 gaggcgctcc cgctgctcgg cagcgcgtcg agcgcgccct ggagcgagca aaacgcaccg
      841 ctgccgtcga gcgccacgct gacgctcgcg aggttcgacg gcgccgcggc ggccgtgctg
      901 aagcgccacg cagagccgct cagggaaaac gagccgccgc ccgcggggac gatggcgccc
      961 gccgggacgt tcacggagta cgtttggccg taggcgagac ccttcgacgg gaggtagagg
     1021 acggcggtgt tgccgtcgat gtaggcgcgg cgttcgagcg tgaagctctg gccgccaatc
     1081 gtgtcggtga cgttctgcgc gcccaggtcg acgctcgccg cgactttgcc ggcagcgtcg
     1141 agcacttgaa cgctgccgct cttgccgaac gtgggcggct tcgcgaacgt gatgcgcagc
     1201 gaaggatcct tgcagaggtt cgtcgcgttc ggcgccggga acagcgccgt cacgccgtcc
     1261 ggtaagccga ccatcgctgc acccgcgctg ccgccgccgt tcgtcccgct cgtgccgccg
     1321 cgcccaccca tcggcccgcc gccagtggac gtgccgccgc ggcccgcgct cgtgccgccg
     1381 ccaggtccgc cgacgttcgc catgccgccg gcgccgaggt cgcgtccgcc cgtgcccgcg
     1441 acggtccctc gcccgcccgc tgcgctcgtg ccgccgctcg tggacgtgtc cgcaccgccc
     1501 gcgggtgcgc cgccgttcgt cgccagcgcg ccgccgctgc tcggacgggc accgccggtc
     1561 gcggcgctgc cgccgctcgt cccaccagcg ccggcgcgtc ccaccgtgcc gccgccgcct
     1621 gcacgtccgg ctccgtgcgt accggcagcg ccgccgtccg gctgcgacac cgcgccgtct
     1681 ccggcgtcgc taccgcacgc cccgagcgcc agcgcgcacg aaatccagcc gagccgttgc
     1741 gcgaaatacc agcgcatttt cgccatgccg ccgagttcag ttgttcgccg gcgccgcgac
     1801 cggtcagcaa atgctagctc ttcgtccccg cgatgctgcg cttcgagcac ccttacgcga
     1861 agtttctcga caaagtcgag aagccgagcc gctacaccgg cgccgagcac ggcgcgcgca
     1921 agaaggcgtg ggacggcgtc gtcgcgcgcg tctgcctggc gttccccgac atctacgaca
     1981 tcggcatgag ccacctcggc ttcaggatgc tctacaagat cctgaacgac gacccccgca
     2041 cgctcgccga gcgcgcctac acgccctggg tcgacatgca gcgcgagctc cgtgcccacg
     2101 gcaaattgct ggtctcgctc gagagcgcgc ggccgctcgt cgacttcgac gtggtcggct
     2161 tctcgctgca atacgagctc acctacacca atattctgag catgctcgag ctcggcggga
     2221 tcccgctgcg tagcgagcac cggagtgacg ccgatccgct cgtcgtgg
//
LOCUS       DATIML010000963         3624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_495106, whole genome shotgun sequence.
ACCESSION   DATIML010000963 DATIML010000000
VERSION     DATIML010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495106"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VLJ38_16650"
     CDS             <1..198
                     /locus_tag="VLJ38_16650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41210.1"
                     /translation="AFWAAGSASARMAWHASRIVGLEAELGLSVPFTRYELVEKESGE
                     VIHDTETVGFSAALGVLVGLP"
     gene            195..776
                     /locus_tag="VLJ38_16655"
     CDS             195..776
                     /locus_tag="VLJ38_16655"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41211.1"
                     /translation="MIDRPGAGHDAGKGQVNPVSSDAAIERLVLAHFDFIWRLLRRFG
                     LDPSDADDAAQEVFIVAARRLTSIEDGRERPFLYGTALRVLANVRRGERRRRETGDAA
                     LVELPAMARPLDELIDDERARARLDALLEALPPELRRVLVLAEIEEQSTPEIAALEGI
                     PLGTAASRLRRARERLRELAGADGACARDRSDA"
     gene            773..1465
                     /locus_tag="VLJ38_16660"
     CDS             773..1465
                     /locus_tag="VLJ38_16660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41212.1"
                     /translation="MTPDEPDGALERLFRAARSETPRSDVRSRAVERAVASTRVRSRR
                     RGLTLGLVLAAAAGVAFAFGLQHFPAVGISVGPERLPPSTHPNPTPDLPAHPTRPAPA
                     SATPTARADTSADATRLDKPTVPRPAPTLGQELALLQAARAALDAGDGKHALALLDHY
                     ARSTQKPRLADEATVVRLEALSRTGRGAEAAKLAREFVAEHPGSPLVDRARAFITTPK
                     TAASAVEPEGTP"
     gene            1462..2490
                     /locus_tag="VLJ38_16665"
     CDS             1462..2490
                     /locus_tag="VLJ38_16665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41213.1"
                     /translation="MKHFKIVRAIANAALASLAACNGQLAIEDGSGAGSAGYATGGST
                     SSSDATAGQATGGHAGVLLPGPQSNTPEDKPPNVGSSANASNCPESLPDDESVCGVGE
                     GQYCTYLYDRNSTSNSAVSQSCGCWLASGGSMRWDCGQPRGAEACPDAQPSTGSDCFG
                     MRGVSCSFPPHTECDCMPTSPSANTMTWQCTSTAPERGSASGPAGVDATKPVAELTDA
                     ERSAWCGWYADAYFGAGAPDVPDNVDANGYAGGGWTVGARLECLACLPAVSRAECAAN
                     LALSTCEAPVGALTDCTLTILDFCTPAPHGCAPYFDAPNCDGTMLVARPADVVPTTGN
                     SSCSIRVR"
     gene            complement(2544..>3624)
                     /locus_tag="VLJ38_16670"
     CDS             complement(2544..>3624)
                     /locus_tag="VLJ38_16670"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /protein_id="HSU41214.1"
                     /translation="LLLGLLLFQRVRRRERLSRRLALWVTVFAALAAAAAVYAERVVL
                     GWTDLSFQVSTAGATGALLATFLLAAPLEESLKVLVVWPLYRRHRFSTGRGGLFYAAA
                     AAAGFAAVETALSPIKTGDGIGLVRLLLSIPAHLFFAGVWGYALGAARLHDRWFRFAW
                     FFAMLLHGLYDHIVWGRGPGLLVAVLPMVLFMIAGSVMALRGVAPVKTAPLALIEPPT
                     LEAVEARFAHQHERPVMLRWIIAGAFVTLGLIVAFVVAAVVLGNRFDIDFALADESDV
                     RSSGPLILLGAAVLAAFPISGYLVARASAAHGLLEPAAAAVLTVGLLVFMLWLAAPIG
                     VLFALAVAPIALGLACGGAWIGVER"
BASE COUNT          640 a         1276 c         1241 g          467 t
ORIGIN      
        1 gcgttctggg cagcgggcag cgcaagcgcg cggatggcct ggcacgcgag ccgcatcgtc
       61 ggactggaag cggagctcgg tctcagcgtg ccgttcacac gctacgaact cgtcgaaaaa
      121 gagtcgggcg aggtgattca cgatacggaa actgttgggt tttctgccgc gctcggcgta
      181 ctcgtcgggc tcccgtgatc gatcggccag gggccggaca tgacgcgggc aagggccagg
      241 tgaacccggt ctcgagcgac gcagccatcg aacgcctggt cctcgcccat ttcgatttca
      301 tctggcggct actccggcgc ttcgggctcg acccgagcga cgccgacgac gcggcgcaag
      361 aggtattcat cgtggcagcg cgacgactca cgagcatcga agacggacgc gaacgaccgt
      421 ttctctacgg cacggcgctg cgcgtgctcg cgaacgtccg ccgcggcgag cggcggcgcc
      481 gcgaaacggg cgacgccgct ctcgtcgagt tacccgccat ggcgcgaccg ctggacgagc
      541 tcatcgacga cgagcgtgcg cgtgctcgcc tcgacgcact gctcgaggcg ctgccgcccg
      601 agctccggcg cgtcctcgtg ctcgccgaaa tcgaggagca gagcacgccc gagatcgccg
      661 cgctcgaggg cataccgctc ggcacggcag cgtcccgctt gcgccgcgcg cgcgaacgcc
      721 tgcgtgaact agcgggcgcg gacggcgcgt gtgctcgcga ccggagcgac gcgtgacccc
      781 ggacgagccg gacggagcgc tcgagcggtt atttcgcgcc gcgcgcagcg aaactccgcg
      841 cagcgacgtg cgaagtcgcg cggtcgagcg tgcggtcgcg agcacgcgcg tgcggtcgcg
      901 taggcgtggt ctcacgctcg gactcgtctt ggccgcggcg gcgggtgtcg cattcgcgtt
      961 cggactgcag catttcccgg cggtcggcat cagcgtcggc cccgagaggc tgccgccgag
     1021 cacgcaccca aatccaaccc ccgatctacc agcgcatccg acacgaccgg cacccgccag
     1081 cgccacgccc acggcgcgcg ccgacacgag cgctgacgcg acgcgcctcg acaagcccac
     1141 cgtcccccgc cctgcgccca cgctcggcca agagctcgcg ctgctccaag ccgcacgcgc
     1201 ggctctcgac gccggtgacg gcaaacacgc gctcgcgttg ctcgatcact acgcgcgttc
     1261 gacgcagaag ccgcgcctcg ctgacgaagc gaccgtcgtg cgcctggaag cgctctcgcg
     1321 cacgggacgt ggcgccgagg cggcaaagct tgcacgcgag ttcgtcgccg agcaccccgg
     1381 gagtccgctc gtcgatcgcg cgcgcgcctt catcaccaca ccgaaaacgg ctgcttcagc
     1441 agtcgaacca gaaggaactc catgaagcat ttcaaaattg tacgcgcgat cgccaatgcg
     1501 gcgctcgcga gccttgcggc ctgcaacggc caactggcca tcgaggatgg gtcgggcgcg
     1561 ggttccgccg gttacgcgac gggcgggtcc acgagcagca gcgacgcgac ggcggggcaa
     1621 gcgaccggcg ggcatgccgg cgtgctctta ccgggtccgc aaagcaacac accggaagac
     1681 aaaccgccga acgtcggctc gtcggcgaac gcaagcaact gtccggaatc gttgccggac
     1741 gacgagagtg tctgcggcgt cggcgaagga cagtactgca cctacttgta cgaccgaaac
     1801 tccacctcaa attctgccgt gtctcagtcg tgcggttgct ggctcgccag cggcggcagt
     1861 atgcgctggg actgcggcca accgcgcggc gccgaggcgt gccctgacgc ccagccctcg
     1921 acgggttccg attgcttcgg tatgcgtggc gttagctgca gctttccgcc gcacaccgag
     1981 tgcgattgca tgcccacgag cccatcagcg aacacgatga cctggcagtg cacgtcgacc
     2041 gcgcccgaac gaggctcagc gtccggaccg gccggcgtcg atgcgacgaa acccgtcgcg
     2101 gagctcaccg acgcagagcg cagcgcgtgg tgcgggtggt acgcggatgc ctacttcgga
     2161 gcgggcgctc ccgacgttcc agacaacgtc gacgcgaacg gctacgcggg gggcggctgg
     2221 accgtgggcg cacggctcga gtgcctcgcc tgcttgccgg ccgtttcgag agccgaatgc
     2281 gccgccaatc tcgctctttc cacctgcgaa gcccccgtcg gagcgctcac ggactgcacc
     2341 ctcaccatcc tcgatttctg cacgcccgcg ccgcacggct gcgcgccgta cttcgacgca
     2401 ccgaattgcg acggcaccat gctcgtggcg cgccccgcgg atgtcgtgcc gacgaccggc
     2461 aacagcagct gctcgattcg cgtgcgctga cgtaatgcat gccttttgca accgtcaggg
     2521 gcgacgtgaa ggcgtgcgga cgactagcgt tccacgccga tccacgcccc accgcacgcg
     2581 agcccgagcg cgatgggtgc gaccgctagc gcgaagagca cgccgatcgg cgcggcgagc
     2641 cagagcatga acacgagcag gccgaccgtg agcacggcgg ccgcagcggg ttcgagcaag
     2701 ccgtgcgccg cgctcgcgcg tgcaacgagg tagcccgaga tcggaaacgc cgcgagcacg
     2761 gcggcgccga gcaggatgag cggcccggac gagcgcacgt cggattcgtc cgcgagcgcg
     2821 aagtcgatgt cgaagcggtt gccgagcacg acggccgcca cgacgaacgc cacgatgagc
     2881 ccgagcgtca cgaaggcgcc agcgatgatc caacgcagca tcaccgggcg ctcgtgctgg
     2941 tgggcgaagc gcgcctcgac cgcttcgagc gtcggcggct cgatcagcgc gagcggcgcc
     3001 gtttttacgg gcgctacgcc acggagcgcc atcacgctgc ccgcgatcat gaagagcacc
     3061 atcggcagca cggcgacgag taggcccggg ccgcgccccc acacgatatg atcgtagagg
     3121 ccgtgcaaga gcatggcgaa aaaccaggcg aaccgaaacc agcgatcgtg cagccgcgcc
     3181 gcgccgagcg cgtaccccca aacgcccgcg aagaagagat gcgcgggtat cgagagcagg
     3241 agccgcacga ggccgatgcc gtcgccggtc ttgatcggcg agagcgcggt ttcgacggca
     3301 gcgaagcccg cagctgccgc agcggcgtag aaaagtccgc cgcgtcccgt ggagaagcga
     3361 tgacgccggt agagcggcca gacgacgagc accttgaggc tctcttcgag cggcgcggcc
     3421 aagagaaagg tcgcgagcag cgctcccgtg gcgcccgccg tgctcacctg gaacgataga
     3481 tccgtccagc cgagcacgac gcgctcggcg tagacggccg ccgccgccgc gagcgcggcg
     3541 aacaccgtga cccagagcgc gagtcgccga gatagccgct cgcgccggcg cacgcgctga
     3601 aacaggagca gaccgagcag gagc
//
LOCUS       DATIML010000964         2199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2804004, whole genome shotgun sequence.
ACCESSION   DATIML010000964 DATIML010000000
VERSION     DATIML010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2804004"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2199
                     /locus_tag="VLJ38_16675"
     CDS             <1..>2199
                     /locus_tag="VLJ38_16675"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSU41215.1"
                     /translation="RSVQQYIEEGIASKGKVLTENHALALRGLTLDNAFLDMQRLVER
                     AIKDNDDLVFGVYVSSERETLALARRPLHASDTTPERDAWRSLGLKPEELSVKSARIE
                     HTRRFGQELLEVAAPVLGEDGEALGTVRYGLSTKRMQDALKAAQADSSARLKRSFWFI
                     GLLVGLAVAGGVFLSRLQAVKITQPIGALTRAAELFAAGHRDVRVSIQSEDELELLGA
                     SFNRMVEDLGTSYENLEEMNRTLEQKVTARTFELADKNRDMRLVLDNIDQGFVTLSRD
                     GVMALERSRQVGAWFGESDGQVPFWHYLAHTSADFAAGFELAWSQIAEDFLPLSVCLE
                     QLPSRLTQGERTWSFRYLPFFREDELEGVLVAVADITERLAREREDAEHTDLMQAFRH
                     FVQDRTGFEVFLAESSELVASICEHKLEHDPIRLKRALHTLKGTSGSMGLSAIAETCH
                     QAESELVESDAVSPELVRALGTRWQTLVERLSSFGLRRARMVEIPEKEYAELITLVSS
                     GSGSRQGIAHRLAAFQAEPVDKAFRRLGDQAIQLARRFGKDDLRVVIDAGGVRLDHER
                     FGAFFGELVHAVRNAVDHGIERPEERVAAGKPREGTLELRAALAQGELSIELTDDGAG
                     IDWEAIRRAAGARGLPHRTEADLLDALCTDGVTTRAEVTTVSGRGVGMAALRQRVLAL
                     HGTLGVSSVRGRGTTWSLRFPAGEREAFGMQSGIFALRLAAGLVAKAGQG"
BASE COUNT          370 a          766 c          731 g          332 t
ORIGIN      
        1 tgcgcagcgt gcagcagtac atcgaggaag gcatcgccag caaaggcaag gtgctgaccg
       61 agaaccacgc gctcgcgctg cgcggcctca cgctcgacaa cgcctttctc gacatgcagc
      121 ggctggtcga gcgcgcgatc aaggacaacg acgatctcgt gttcggcgtc tacgtgagct
      181 cggagcgcga aacgctcgct ctcgcgcgcc gtccgctgca cgcgagcgac acgacacccg
      241 aacgcgatgc ctggcgctcg ctcggactca aacccgagga gctcagcgtc aagtcggcgc
      301 gcatcgagca cacccgccgc ttcggccaag aattgctgga ggtcgcggcg cccgtcttgg
      361 gcgaggacgg ggaagcgctc ggtacggtgc gctacggcct ctcgaccaag cgcatgcaag
      421 acgcgctcaa ggctgcgcaa gccgactcct ccgcgcggct caagcgctcg ttctggttca
      481 tcgggctgct cgtggggctg gccgtcgccg gcggcgtgtt cttgagtcgc ctgcaagcgg
      541 tcaagatcac gcagcccatc ggcgccctca cgcgcgcggc cgagctcttc gcggccgggc
      601 atcgcgacgt gcgcgtcagc atccaatcgg aggacgaact cgagctactc ggcgcctcct
      661 tcaaccgcat ggtcgaggac ctcggcacct cctacgaaaa cctcgaggag atgaaccgca
      721 cgctcgagca aaaggtgacc gcccgcacct tcgagctcgc ggacaagaac cgcgacatgc
      781 gcctcgtgct cgacaacatc gatcagggtt tcgtcacgct ctcgcgcgac ggagtcatgg
      841 cgctcgagcg ctcgcgccag gtcggcgcct ggttcggtga aagcgatggc caggttccgt
      901 tctggcacta cttggcgcac acgagcgcgg actttgccgc gggcttcgag ctcgcgtggt
      961 cgcaaattgc cgaagatttc ctgccgctca gcgtctgcct cgagcagctc ccgagccggc
     1021 tcacacaggg cgagcgcacc tggagcttcc gctatctacc gttcttccgc gaagacgagc
     1081 tcgaaggcgt gctcgtcgcc gtcgccgaca tcaccgaacg cctcgcgcgt gaacgcgagg
     1141 acgccgagca cacggatctg atgcaagcct tccggcactt cgtgcaggat cgcacgggct
     1201 tcgaagtgtt cctcgcggag tcgtcggagc tcgtggcctc gatttgcgag cacaagctcg
     1261 agcacgatcc gattcgcctc aaacgcgccc tgcacacgct gaagggcacg agcggctcga
     1321 tggggctctc cgcgatcgcc gagacgtgtc accaggccga atccgagctc gtcgagagcg
     1381 acgccgtctc gcccgagctc gtgagagcgc tcggcacgcg ctggcagacg ctcgtggagc
     1441 gcctctcgag cttcggcctg cgccgcgcgc gcatggtcga aatcccggag aaggagtatg
     1501 ccgagctcat cacgctcgtc tcgagcggct caggctcgcg gcagggcatc gcgcaccggc
     1561 tcgcggcctt ccaagcggaa cccgtcgaca aagcgttccg gcggctcggc gatcaggcga
     1621 tccagctcgc acgtcgcttc ggcaaggacg atctgcgcgt cgtgatcgac gcgggcggcg
     1681 tgcgcctcga tcacgagcgc ttcggcgcct ttttcggtga gctcgtgcac gccgtgcgca
     1741 acgccgtgga ccacggcatc gagcgtccgg aggagcgcgt ggccgcgggc aagccgcgcg
     1801 aaggcacgct cgagctcaga gcggcactcg ctcaaggcga gctcagcatc gagcttaccg
     1861 acgacggcgc cggcatcgac tgggaggcca tccgacgcgc cgcaggagcg cgcggactgc
     1921 cgcatcgcac cgaggccgac ctcctcgacg cgctctgcac cgacggcgtc acgacgcgcg
     1981 ccgaagtaac caccgtttcg ggccgcggcg tcggcatggc ggcgctccgg caacgcgtgc
     2041 tcgcgctcca cggcacgctc ggcgtgagca gcgtccgggg ccgcggcacg acttggagct
     2101 tgcgctttcc cgcaggggag agggaagctt tcggcatgca aagcggcatc tttgccctgc
     2161 gcctggcggc ggggctcgtc gcgaaagcag gccaaggcc
//
LOCUS       DATIML010000965         2614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_785511, whole genome shotgun sequence.
ACCESSION   DATIML010000965 DATIML010000000
VERSION     DATIML010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785511"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VLJ38_16680"
     CDS             complement(<1..226)
                     /locus_tag="VLJ38_16680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41216.1"
                     /translation="MFSRGASIALGVLMLAGCKPGVGSACQKGDARCLDAARALVCES
                     GHFVETPCRGKDGCRTKLEVTACDIHGNQPG"
     gene            complement(269..1144)
                     /locus_tag="VLJ38_16685"
     CDS             complement(269..1144)
                     /locus_tag="VLJ38_16685"
                     /inference="COORDINATES: protein motif:HMM:TIGR03901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MYXO-CTERM sorting domain-containing protein"
                     /protein_id="HSU41217.1"
                     /translation="MLKRLSYVGALALLPSFFIARPAYAGIEQCGNIDVQANATCELD
                     TSGGCTARCTPVSFEAQCSADLEVDCQGSCTASASATCTASCNVDSCVAECQVKPATF
                     DCSANCEAQGSATCTGECQGKANQAECETSCKASFSARCDASCQGHAGSVDCMASCQA
                     SCQGRCDAQANVDCDVTCQTKGKASCEANLEGGCKAQCTAPKGALFCDGQYVDVGNNL
                     ADCEAALKAALNIEVHGSASSSGSCSGGECEAEGKASGSASCAVSPASPDASGVGFAL
                     AGLGLAAFVARRRRR"
     gene            complement(1192..>2614)
                     /locus_tag="VLJ38_16690"
     CDS             complement(1192..>2614)
                     /locus_tag="VLJ38_16690"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HSU41218.1"
                     /translation="HGNYPAPERILEVVRLGLSRGIEAGLGAESAAFGELGQSAEARE
                     LMGLFFAQNELKKDSGVAEPNIEPRKLKRIGVLGAGLMGAGVAYVTAVNAKLPVRLKD
                     RDERSLGHGVAHLHELFVERARSRRLSDFERDRESARVTPATTYDGFDGLDLVIEAVF
                     EDLTLKRAVLADVFSHGGKNLIFASNTSSLPITKIAEGSVAPERVIGMHYFSPVPKMP
                     LLEVITTERTAPWVTATAVDLGKRQGKTVIVVRDGAGFYTSRVLGPYLNEASFLLAEG
                     VPVEVLDAALVRFGFPVGPVLLLDEVGIDVGLKVGKILHEAFGERMALPPGVERLVED
                     ERFGKKNGRGFYDYATKKKDKREVDASVYMVLGVEPKSDVPAPDIVERCVLQFVNEAA
                     YCLGDGILRSARDGDIGAVFGLGFPPFRGGPFRYMDAVGAAEIVRRLERQQKEHGERF
                     RAAPLLLELARKNETFYGKHLPG"
BASE COUNT          461 a          891 c          839 g          423 t
ORIGIN      
        1 cacccggctg gttgccgtgg atgtcgcagg cggtgacttc gagcttggtg cggcagccgt
       61 ccttaccgcg gcacggtgtc tcgacgaaat ggcccgattc gcagacgaga gcgcgcgcag
      121 catcgaggca gcgcgcgtcc cccttctgac aggcgctgcc gacgccaggc ttgcaaccgg
      181 cgagcatgag cacgccgaga gcgatcgaag cgccgcgtga aaacacggcc ctcgagtcta
      241 gcgcagtccc gacctgagcg gcgacggctt agcggcgacg gcggcgtgcg acgaaggccg
      301 cgaggccgag gcccgcgagc gcaaaaccta caccgctcgc atccggagac gccggcgaaa
      361 ccgcgcagct cgcggagccg gacgccttgc cttcggcttc gcactccccg cccgagcacg
      421 agccgctcga gctcgccgaa ccgtggacct cgatgttgag cgcggctttg agcgctgcct
      481 cgcaatcggc gaggttgtta ccgacatcga cgtattgtcc gtcgcagaag agcgcgccct
      541 tcggcgcggt gcattgcgcc ttgcagccgc cttctaggtt cgcttcacag ctggccttgc
      601 ccttcgtctg gcaagtcacg tcgcagtcga cgttcgcctg cgcatcgcag cgtccctgac
      661 agctcgcctg acaggacgcc atgcaatcga cggaccccgc gtggccctga cagctcgcgt
      721 cacagcgcgc cgagaacgac gccttgcacg acgtttcaca ctcggcctga ttggccttgc
      781 cctgacactc acccgtgcac gtggcgctgc cttgagcttc acagttggcc gaacagtcga
      841 aggtcgccgg ctttacctgg cactcggcca cgcaggaatc cacgttgcaa gacgccgtgc
      901 aggtcgcgct ggcgctcgcc gtgcaggaac cttggcaatc gacctccaga tcggccgagc
      961 attgagcctc gaagctcacc ggcgtgcagc gcgccgtgca gccgcccgac gtgtcgagct
     1021 cgcacgtggc gttcgcttgc acgtcgatgt tgccgcactg ctcgatgccc gcgtaggcgg
     1081 gacgcgcgat gaaaaaactg ggaaggagcg cgagagcgcc gacgtaagaa aggcgtttga
     1141 gcattgataa cctccaggga agccgcgaat aggtcccgaa agcatacgcg attagccggg
     1201 caggtgcttc ccgtagaacg tctcgttttt tcgcgccagc tcgagcagga gcggcgccgc
     1261 gcgaaaacgc tcgccgtgct ccttttgctg acgctcgagg cgacgcacga tttcggcggc
     1321 tccaaccgca tccatgtagc gaaatgggcc accacgaaac ggcggaaagc cgagcccgaa
     1381 cacggcgccg atgtcgccgt cacgcgcact tcgcaggata ccgtcgccga gacaataggc
     1441 cgcttcgttc acgaactgga gcacgcagcg ttcgacgatg tccggcgccg gcacgtcgct
     1501 cttcggctcg acgccgagca ccatgtagac gctcgcgtcg acttcacgct tgtccttctt
     1561 cttcgtggcg tagtcgtaaa agccgcgacc gttcttcttg ccgaagcgct cgtcctcgac
     1621 caaacgctcg acgcccggcg gcagcgccat gcgctcgccg aacgcttcgt gcaggatctt
     1681 gccgactttg aggcccacgt cgatcccgac ttcgtccagc aataggacgg gccccacggg
     1741 aaaaccgaaa cgcacgagcg ccgcatcgag gacttcgacg ggaacccctt cggcgagcaa
     1801 gaacgacgct tcgttcaggt aggggccgag gacgcgcgaa gtgtaaaagc ctgcgccgtc
     1861 gcgcacgacg atcaccgtct tgccttgtct tttgccgagg tcgacggcag tcgccgtcac
     1921 ccacggcgcg gtgcgctcgg tcgtgatcac ctcgagcagc ggcatcttcg gcacgggcga
     1981 gaagtagtgc atgccgatca cgcgctcggg cgcgacggag ccttcggcga tcttggtgat
     2041 gggaagcgac gacgtgttcg acgcgaaaat caggttcttg ccgccgtgcg aaaagacgtc
     2101 cgccagcacg gcgcgcttga gcgtcaaatc ctcgaacacg gcttcgatca ccagatcgag
     2161 gccgtcgaag ccgtcgtagg tcgtcgcggg cgtgacgcgc gccgactcgc gatcccgctc
     2221 gaaatcggag agccgccgtg accgcgcgcg ttcgacgaag agctcgtgca ggtgcgcgac
     2281 gccgtggccg agcgagcgct cgtcgcgatc cttgagccgc acggggagct tcgcgttgac
     2341 ggccgtgacg taagcgacgc ccgcacccat gagaccggcg ccgagcacgc cgatacgctt
     2401 gagcttgcgc ggctcgatat tgggctcggc gacgccggaa tccttcttca gctcgttctg
     2461 cgcgaagaag aggcccatga gctcgcgcgc ttcggcgctc tggccgagct caccgaacgc
     2521 agccgattcc gcgccgagcc ccgcctcgat gccgcgcgag agaccgagcc gcacgacctc
     2581 gaggatgcgc tccggcgcgg ggtagttccc gtgc
//
LOCUS       DATIML010000966         2175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1652336, whole genome shotgun sequence.
ACCESSION   DATIML010000966 DATIML010000000
VERSION     DATIML010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1652336"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..>2175)
                     /locus_tag="VLJ38_16695"
     CDS             complement(8..>2175)
                     /locus_tag="VLJ38_16695"
                     /inference="COORDINATES: protein motif:HMM:TIGR02243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative baseplate assembly protein"
                     /protein_id="HSU41219.1"
                     /translation="DRTGDFSTYTLVLAAAELDPLLSSCDFSFKAGCPTRFDCRRSSS
                     CPPPALAAPLIDYLAKDYASFRQALLDRLPVLVPSWTEQHEADLGVTLVELLAYAGDL
                     LSYYQDSVANEAFLPTARRRVSVRRHARLVDYAMHDGASARAFVQFETEPGTSAFVPA
                     DTPVLSRVQAGQNAVLYAMTGGVVNRDAARALREADVFFRTLEDITCADELGTMQIYT
                     WGRSDCCLPRGTSELFLRGPLQSLAPGALVILEEVLGAATGRPEDADPGRRQAVRLTE
                     VSATNDPLLGVPLVHVRFADEDALTQPFCLSTSIASGDTTLVIEDVTLVRGNVVLAEH
                     GRSVVEEFRPAGVALSPGAEPHPGPTPHADGVRLRLSESPLTQSVPAVAGASVAAILR
                     ADVNAAQPNVVLTLGVPPATWTPERDLLHATAFDRVFVAEVDERNVASLRFGDGTYGE
                     RPSDFSSYALGYRVGVGTAGNVGAESLAHLLWPDSSAPLSIRRVRNPLPAFGGVEPES
                     SERVKAAAPVAFRRGLERAVTEDDYAKLAERIAGVARAVATFRWTGSFYTVFVAIDRV
                     GGAAVDDAFRALVTSALEPYRMAGYDLEVNGPSYVPLDVNIDICVARDHFRADVEAAV
                     LDALSSKLRADGSLGFFHPDRFSFGQPLYVSALYAAVMAVQGVEGANVTRLQRWGRTA
                     AGELERGYVPAGRLEILRLDDDPDAQENGVLSLELGGGR"
BASE COUNT          368 a          747 c          764 g          296 t
ORIGIN      
        1 gccgccgtca cctgccacct ccgagctcga gtgataggac gccgttttcc tgggcgtccg
       61 gatcgtcgtc gagccgcagg atctcgagcc ttcccgccgg gacgtagccc cgctcgagct
      121 cgccggccgc cgttcgaccc cagcgctgga ggcgcgtcac gttcgcgccc tcgacgccct
      181 ggacggccat gaccgcggcg tagagcgccg acacgtagag cggctggcca aagctgaacc
      241 ggtccgggtg gaagaagccg agcgagccgt ccgcgcgcag cttgctcgag agggcgtcga
      301 gcacggccgc ctccacgtcg gcccggaagt gatcacgcgc gacgcaaatg tcgatgttta
      361 cgtcgagggg tacgtagctc ggaccgttga cctcgagatc gtaaccggcc atgcgatacg
      421 gctcgagggc gctcgtcacg agcgcgcgga acgcgtcgtc gacggcggcg ccgcccacgc
      481 gatcgatcgc gacgaagacc gtgtagaagc tgcccgtcca gcgaaaggtc gcgacggcac
      541 gcgccacgcc tgcaatgcgc tcggcgagct tcgcgtagtc gtcttcggtg accgcacgct
      601 cgaggccgcg acggaacgcg acgggcgccg ccgctttgac gcgctcgctg ctctccggct
      661 cgacgccgcc gaacgccggc aacggattgc gcacgcgccg gatcgagagc ggcgccgagg
      721 agtcgggcca gagcaggtga gccagcgact ccgcgccgac attgcccgcc gttccgacac
      781 cgacacgata gccgagcgca tagctcgaaa agtcgctcgg tctttcaccg taggtcccgt
      841 cgccgaagcg caagctcgcg acgttgcgct cgtcgacttc cgcgacgaac acacgatcga
      901 acgccgtagc atgcagcaaa tcgcgttcgg gcgtccacgt ggccggcggc acgccgagcg
      961 tgagcacgac gttcggctga gccgcgttga cgtcggcgcg caggatcgcg gcgacggacg
     1021 cgccggcgac ggccggcacg ctttgcgtga gcggcgactc actcaagcgc aggcggacgc
     1081 cgtcggcgtg cggagtcgga ccgggatgcg gctcggcgcc gggcgagagc gcgacgcccg
     1141 ccggccgaaa ctcctccacg acgctgcggc cgtgctcggc gagcacgacg ttgccgcgca
     1201 cgagcgtcac gtcctcgatc acgagcgtcg tgtcacccga agcgatgctg gtcgagagac
     1261 agaacggctg ggtgagcgcg tcctcgtcgg cgaagcggac atgcacgagc ggcacgccga
     1321 gcagcggatc gttcgtcgcg gacacctccg tcaagcggac ggcttggcgg cggccggggt
     1381 cggcgtcctc gggccggccg gtcgcggcac ccagcacctc ctcgaggatc acgagggcgc
     1441 ctggagcgag ggactgcagc ggtccacgca aaaagagctc gctggttcca cgcggcaagc
     1501 agcagtcgga acgaccccac gtgtagatct gcatcgtgcc gagctcgtcc gcgcacgtga
     1561 tgtcttcgag cgtgcgaaag aagacgtcgg cctcgcggag cgctcttgcg gcgtcccggt
     1621 tcacgacgcc gcccgtcatt gcgtaaagga cggcgttttg acccgcctgc acgcgcgaga
     1681 gcaccggcgt gtccgcgggg acgaacgcgc tcgtgccggg ctccgtctcg aactgtacga
     1741 aggcgcgggc gctcgcgccg tcgtgcatcg cataatcgac gagccgcgcg tgccgccgca
     1801 ccgagacccg ccgccgcgcc gtgggcaaga aggcttcgtt cgcgaccgag tcctgatagt
     1861 agctcaagag gtcacccgcg tacgcgagga gctccaccag cgtcacgccg agatcggctt
     1921 cgtgctgctc cgtccagctc ggcacgagaa cgggcagccg atccagcaat gcttgccgaa
     1981 agctcgcgta gtccttggcc agatagtcga tgagcggtgc ggcgagcgcg ggcggcgggc
     2041 agctgctgct gcgacggcag tcgaagcggg tggggcagcc cgccttgaac gagaaatcac
     2101 aggacgaaag cagcggatcg agctcggccg ccgcgagcac gagcgtgtac gtcgaaaagt
     2161 cccctgtacg atcga
//
LOCUS       DATIML010000967         2036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5408786, whole genome shotgun sequence.
ACCESSION   DATIML010000967 DATIML010000000
VERSION     DATIML010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5408786"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..1514)
                     /locus_tag="VLJ38_16700"
     CDS             complement(54..1514)
                     /locus_tag="VLJ38_16700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU41220.1"
                     /translation="MTSIVPPSVKVLIVEDEPGLRQMLEILFNREGYAVVSAPGYRAA
                     VEAITQHPQPFPLVLTDLAMPDGSGLDLVSVAKGRSLATEIILLTAHSSVENAILAMR
                     SGAYDFVAKPFKPAELAALVAKALEKSALITENLRLKARVSAEEQGRELLGKSEAMRR
                     VLDVIDRVAATRATVLITGQSGTGKERVARAIHQRSDRAQGPFLVVNCGALPENLMES
                     ELFGHEKGAFTGAQSKRQGLFRDAHGGTILLDEIGELPQSLQVKLLRVLQERSVRPVG
                     ASEEVPVDVRLLAATNRDVEADVAAGRFRQDLYYRLNVIRLTLPPLRERREDIPLLAE
                     RFLVRFAREMGKDVAGFTPDALRAIERYAYPGNVRELENVIERAVALAGARVIGTGDL
                     PEEVSGQLGAPDQGLLQLGADGCDLDAVLNEAERRLLIAALERTGGVRKAAAKVLGVT
                     FRSLRYRLQKHGLGGDGEGTSGGGLDGGTGEDDDEE"
     gene            1617..>2036
                     /locus_tag="VLJ38_16705"
     CDS             1617..>2036
                     /locus_tag="VLJ38_16705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41221.1"
                     /translation="MLRLGAISSRTRSSAGRPVLAVFVLALGACGNGGAQTPAGDDAS
                     AASAGKGPTTGAAGYSFDLGVRALTTDGLDIDALHLKPSAVADIVAHATPPAAHNVRF
                     ALLGTPLDAVLSLTESTTDATTGDAHVRLVAPSTPTTF"
BASE COUNT          300 a          690 c          699 g          347 t
ORIGIN      
        1 gacgcactcc ccagttcgct tggcgcgtcg atacatgagc tcggagctta gcatcactcc
       61 tcgtcgtcgt cctcgcccgt cccgccatct agcccgccgc cgctcgtccc ctcgccgtcc
      121 ccgccgaggc cgtgtttttg cagccgatag cgcaacgaac gaaacgtaac gccgagcacc
      181 ttggccgcgg ctttgcggac gccgcccgtg cgttcgaggg cggcgatgag caggcggcgt
      241 tcggcttcgt tgaggacggc atcgaggtcg cagccgtcgg cgccgagctg gagcaggccc
      301 tggtcgggcg cgccgagctg gccgctcact tcttcgggca aatcacccgt gccgatgacg
      361 cgcgcgcccg cgagcgccac ggcgcgttcg atgacgtttt cgagctcgcg cacgttgccg
      421 ggataggcgt agcgctcgat ggcgcgcaga gcgtcgggcg tgaagcccgc cacgtccttg
      481 cccatttccc gcgcgaagcg gacgaggaac cgttcggcga ggagcgggat gtcttcgcga
      541 cgttcgcgga gcggcggcaa cgtcaggcga atgacgttga ggcggtagta gaggtcttgg
      601 cggaagcggc cggcggcgac atccgcttcg acgtcgcggt tggtcgcggc gaggaggcgc
      661 acgtcaacgg gcacttcttc gctcgcgccc acgggacgca cgctgcgctc ctggagcacg
      721 cgcaacagtt tcacctgcaa gctttgcggc agctcgccga tttcgtcgag caaaatggtg
      781 ccgccgtgtg cgtcacggaa gagtccctga cgcttgctct gcgcgccggt aaatgcccct
      841 ttttcgtgcc cgaagagctc gctctccatc aagttttcgg gcagggcgcc gcaattgacg
      901 acgagaaacg gaccttgcgc gcgatcggag cgctggtgaa tcgcgcgcgc gacgcgctcc
      961 ttgccggtgc cgctctgacc cgtgatcagc accgtggcgc gcgtcgccgc cacacgatcg
     1021 atgacgtcga ggacgcggcg catcgcttcg ctcttgccga gtagctcgcg tccctgctcc
     1081 tcggcgctca cgcgcgcctt gagccgcagg ttctcggtga tgagcgcgct cttctcgagc
     1141 gcctttgcga cgagcgcggc aagctcggcc ggcttgaacg gcttggcgac gaaatcgtag
     1201 gcgcccgaac gcatcgccaa gatggcgttc tcgacgctcg agtgcgccgt gagcaggatg
     1261 atttccgtcg cgaggctccg ccccttggcg accgacacca ggtcgagccc ggagccgtcc
     1321 ggcatcgcga gatcggtgag gacgagcggg aacggctggg ggtgctgggt gatggcttcg
     1381 acggccgcgc ggtaacccgg ggcgctcacg accgcgtagc cctcgcggtt gaagaggatc
     1441 tcgagcattt ggcgcaggcc cggctcgtct tcgacgatga gtactttgac ggagggcgga
     1501 acaatcgaag tcacagggag ttttcgacgc tatcacgtcc ctcgcggggc agtccggggc
     1561 gctcgcctcg cattccgagc ttgcggcgcg cccggttcgc tctacttttt gagctcatgc
     1621 ttaggttggg agccatctcc tcgaggacgc gttcgagcgc cggtcggccg gtgctcgcgg
     1681 tcttcgtgct cgcgctcggc gcgtgcggca acggcggcgc gcagacgcct gccggcgacg
     1741 acgcgagcgc ggcgagcgcc ggtaaggggc ccacgacagg tgcagctggc tactcgttcg
     1801 acttgggcgt tcgcgcgctc acgacggacg ggctcgatat agacgccctg cacctcaagc
     1861 catctgccgt cgcggatatc gtggcgcacg caaccccacc cgcggcgcac aacgtgcggt
     1921 tcgcgctgct cggcacgccg ctcgacgcgg tcttgagcct caccgaaagc acgaccgacg
     1981 cgaccacggg cgacgcgcac gtgcgcttgg tggcgccgag cacccccacg acgttc
//
LOCUS       DATIML010000968        10618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2225968, whole genome shotgun sequence.
ACCESSION   DATIML010000968 DATIML010000000
VERSION     DATIML010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10618
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2225968"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..257
                     /locus_tag="VLJ38_16710"
     CDS             <1..257
                     /locus_tag="VLJ38_16710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HSU41222.1"
                     /translation="LASAGRFARHGDIGPRAASEIGVQTIRGGDVVGDHTVFLLGTGE
                     RLELTHRASSRELFAQGALAAARFVCGKPPGRYGFKDVLA"
     gene            complement(295..1740)
                     /locus_tag="VLJ38_16715"
     CDS             complement(295..1740)
                     /locus_tag="VLJ38_16715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4215 domain-containing protein"
                     /protein_id="HSU41223.1"
                     /translation="MPSRCGDGVVDPGEECDDGNLSSQDACTGLCKQARCGDGLLWRG
                     EETCDDGNTASGDGCSPSCHGEPRELAAGAMTTCALGAGGVLKCWGDNANGELGRGNT
                     EPLGDQPGELGDALGPIDLAGDLNVFAVAAGGAHTCAASLDGVRCWGYNGDGELGLGD
                     SQNRGGHPGDMGSALPFVDLGQNFLPTAIAAGFRFTCAVSTYGTLKCWGDNTWGQLGL
                     GDGENRGDGAGEMGSLLPLVELGASMKVTAVTLGDLHACALSTTGQVKCWGNNDDGQL
                     GLGDTNARGRDPGEMGAALPFVDLGTGETVSKVLAAGARTCALLGSGKLKCWGENLTG
                     ELGLGDTLNRGTLPGQMGDALPAVEVGTGHSVLDFALGASHTCVVLDDAAVKCWGLNL
                     QGQLGAPGVGVRGGSPSDMGDNLPVTELDGATQRIAAGGFHTCVKLEGAGAIKCWGGN
                     ATGELGLGDAQNRGDDPTEMGPNLPAVDVSF"
     gene            complement(2218..3000)
                     /locus_tag="VLJ38_16720"
     CDS             complement(2218..3000)
                     /locus_tag="VLJ38_16720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41224.1"
                     /translation="MRLRECVRLTVVALFAAAPAQARLRHRVPAFEPTDLELEDPLTL
                     ELDLQFGVLKRDGEPNLRVFVPDFELDFGLTSRVELDVDGALSLDRQSGRFTFAGDNL
                     WVSTKLGFYADSDPFDPDRAWALGAQLGPRLPTAPHSVGTGFGAVLLGARMAPPWHFI
                     VNLGAVLEPVDRSEALRSFALVGGLDLDYDLDVENRWSLLAELGAGYAFGPDPHDVHT
                     TLGLDWNATPRLDLSLVGFYGFVAGGDRAGLFLGVTPKFGPS"
     gene            complement(3025..3441)
                     /locus_tag="VLJ38_16725"
     CDS             complement(3025..3441)
                     /locus_tag="VLJ38_16725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41225.1"
                     /translation="MARRLVTPLRWSWFVVPFGICLGTLGSSSCIQIGPDANDGSAGA
                     DAGEPTNSTVEDQCTRIVTAFCARTQECYGQDPETCINPGVDQCCGRACAKKATSSER
                     AIDACVADIKAGDCEAIDAVTDASDLPASCQNVVKY"
     gene            complement(3423..4250)
                     /locus_tag="VLJ38_16730"
     CDS             complement(3423..4250)
                     /locus_tag="VLJ38_16730"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSU41226.1"
                     /translation="MAPRNVAAFLALLSLGFARPAEGECNRLAPWNRVGTSLAHFTEP
                     LPVTLAALSPLPLMAMAPTGVDHDLRLVAQEDLGGRYRIESVSNFTPYVLAGSALVAF
                     GVSAALGACEVERPLSAILQGMAGGFMVTGVLKWSVGRQWPNGSRDPNAPDRLDHPED
                     AYTFHPFQLVGAWPSGHTLSMFAAAAAFRAAEDELGWPRFLGYPLAAGVAAGMWLGDR
                     HWASDILSGALLGEAIGSSVGQSFAQSGDGPRSGLAHGTLVAIPLSGGMLATWLAVW"
     gene            4540..6285
                     /locus_tag="VLJ38_16735"
     CDS             4540..6285
                     /locus_tag="VLJ38_16735"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSU41227.1"
                     /translation="MIAPLGSAPSSWPAAVPRVSVSEALVAALVGFGVEHAFGVFGGG
                     IAPFCQAVSQSPIRLIHCRHEASAGFAAIESSLATGRPALVIATTGPGITNLHTAMVA
                     ARGEGAKVLFVSGSTVAAQRGRNAFQETGGAFSALSPLFVAGSTFHHAGVIEDPAELD
                     SLLSRLASGFSRPHGFVAHLGLPLALQTARRAPSRACVTTSPPPVCDSLLVAECAELL
                     AREDFVIWAGHGARHAAEEVRALAERTGARVMCTPRGKGILPERHPLYLGVTGLGGHA
                     AVGEYLTRARPARVLVLGSRLGEMSSFWAPELVPARGFVHVDLDSEAFGTAYPEVPTL
                     AVQAEIRSFLRDLLVALPATVANDAVRTEDPASEPALTPRADAAVRPSYLMQVIQRTI
                     VEGSSAIVMTEAGNSFALGSHHLRFPDARRYRVSTGFGSMGQAAAGVLGAAMARGNKA
                     FAIVGDGAMLMLNEINTAANYGIGAVWIVLNDARYGMIEQGMQSVGWQPFETDFPRTD
                     FVAVARAMGGDGIRVDREAAVAEALEAGLSSLGPFVIDVIIDPTEVAPSVQRNKSLAR
                     QGLSSAPGPFGDVGR"
     gene            6294..6632
                     /locus_tag="VLJ38_16740"
     CDS             6294..6632
                     /locus_tag="VLJ38_16740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41228.1"
                     /translation="MLAWSPFSGTHSRFPIQLPQDQRHSWHKLAPREFDANVRVPVAA
                     KTPPNPPAPTTTGKDADATPEHAPSPFNRHFQAPRRPKAAREPSGRVLPPAPAWMAKP
                     LKPPRAPSRD"
     gene            complement(6718..7698)
                     /locus_tag="VLJ38_16745"
     CDS             complement(6718..7698)
                     /locus_tag="VLJ38_16745"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSU41229.1"
                     /translation="MLNTRKLGRQGLEVSELGLGCMGMSHAYGTPDDAESIVTIHRAL
                     ELGVTFFDTAEIYGPFTNEELVGRALEGRRHDAIIATKFGFRFENGKLGGTDSRPESV
                     QKAVEGSLRRLRTDHVDLLYQHRVDKQVPIEDTVGAMAALVQAGKVRYLGLSEAGADT
                     IRRAHRVHPLTALQSEYSLWERNLEAEILPLLRELGVGLVPFSPLGRGFLTGTAKRAD
                     EYPEGDYRRTSDPRLQGEAFDANMRIASRVRDIAETLGATPSQVALAWLLARGDDIVP
                     IPGTKRRTYLEENLAAADVELTHAAQKELDELMAPTGPRYLAAQMATIDR"
     gene            7986..8600
                     /locus_tag="VLJ38_16750"
     CDS             7986..8600
                     /locus_tag="VLJ38_16750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41230.1"
                     /translation="MKTCEYAGAPFEDARSHPWSDMRVSSSARYYDLITSPEHIRSSM
                     EDFKPWAQYPAIETFYALLERLNHKNSMLESNDCAFDGPHANETAGSDAALECSGRVM
                     LFFRVLTRNTAGADVLWLKNELHHALGALDPEFVSGVVGTTLVPVRYLRLPETNDQQL
                     GRELMISFWAWGDTEADNMRNLGRLLKNLTQAVRKVMSSSRARG"
     gene            8650..10203
                     /locus_tag="VLJ38_16755"
     CDS             8650..10203
                     /locus_tag="VLJ38_16755"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HSU41231.1"
                     /translation="MIDHKEFERRVKVRRLQSSDYERVVELQTLCFPRMKAWDLEQFS
                     SMLRIFGEGQIGVELDGSLAASSSSLMLDFDLYSEWHDWTKISDNGYIRNHDPRGNTL
                     YGIEIMVHPEQRGLRLASRIYDARKELCREKNLERLVIGGRIPGYAPNAAQMTAEEYV
                     ARVQAKELYDPVLTTQLANGLVVLRLIPDYLPSDEDSAGWATHMEWVNLAFVPDDKRD
                     LRPTRNVRVAAVQYEMRRIASFEEFERQVEFFVDSSADYRADFVLFPELFTLQLLSLA
                     PGASRPGEAARSLAEHTPRYLELFGRLAIKYNVNIIGGSQFAVEDGKLFNVAYLFRRN
                     GTIDRQFKIHVTPSERRWWGVEGGSRLEVFETDRGRIAILVCYDIEFPELARLAAKQG
                     AQILFCPFNTNERSAYLRVRHCAHARCIENHVYVVLAGCTGNLPQVENADIHYAQSAV
                     LTPCDLFFARDGIAGECQANVETLVIHDVDLELLRRARYTGATLNWNDRRTDLYRINY
                     RSTDGGNDV"
     gene            10251..>10618
                     /locus_tag="VLJ38_16760"
     CDS             10251..>10618
                     /locus_tag="VLJ38_16760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41232.1"
                     /translation="MDRAAVFVDAGYLFAEGSRLLAGEKLRRSALRLDHDKILKFFAE
                     LTRELTAVPLLRVYWYDGATAAPNPAQTALAYRPNVKLRLGLVDERGQHGVDSLLVAD
                     LVTLAKNRAICDALLLSGDD"
BASE COUNT         1718 a         3731 c         3465 g         1704 t
ORIGIN      
        1 agctggccag cgccggccgg ttcgctcgcc acggcgacat cggcccgcgc gccgccagcg
       61 agatcggcgt gcagaccatc cgcggcggcg acgtggtcgg cgatcacacc gtgttcttgc
      121 tcggcacggg cgaacggctc gagctcacgc accgcgcctc gagccgcgag ctcttcgcgc
      181 aaggcgcgct cgccgccgcg cgtttcgtct gcggcaagcc cccgggacgt tacgggttca
      241 aagacgtgct cgcgtagcgc cccgcgcgcg acgtgccgct cacgacccgc gcgctcagaa
      301 gctcacatcg accgcgggca ggtttggccc catctcggtc gggtcgtcgc cgcgattctg
      361 cgcgtcgccg aggccgagct cgcccgtcgc attgccgccc caacacttga tcgcgccggc
      421 gccctcgagc ttcacgcagg tgtgaaagcc gccggctgcg atgcgttgcg tggcgccgtc
      481 gagctcggtc accggcaggt tgtcacccat gtccgagggt gaaccgcccc gcacgccgac
      541 tcccggcgct ccgagctggc cttggaggtt caagccccaa catttgacgg cggcgtcatc
      601 cagcacgacg cacgtgtgcg aggcgccgag cgcgaagtcc aggacgctgt gacccgtgcc
      661 cacctcgacg gcgggtagcg cgtcccccat ctgtcccggc agcgtcccgc ggttcagcgt
      721 gtcgccgagg ccgagctcac cggtgaggtt ttcgccccag cacttgagct tgccgctgcc
      781 gaggagcgcg caggttcgag cgcccgccgc gagcaccttg ctcacggttt cgcccgtgcc
      841 tagatcgacg aagggcagcg cagcgcccat ctcgcccggg tcgcggccgc gcgcgttggt
      901 gtcgccgagg ccgagctgcc cgtcgtcgtt gttgccccag catttgacct ggcccgtcgt
      961 ggagagcgca caggcgtgca ggtcgccgag cgtgacggcc gtgaccttca tgctggcgcc
     1021 gagctcgacg agcggcagca ggcttcccat ctcgcccgct ccgtcgccgc gattttcccc
     1081 gtcgccgagg ccgagctgac cccaagtatt gtcaccccag catttgagag tgccgtacgt
     1141 gctcacggcg cacgtgaacc tgaagcccgc cgcgatcgcg gtcggcaaga agttttgtcc
     1201 taggtcgacg aagggtagcg cgctgcccat gtcgcccgga tggccgccgc ggttctggct
     1261 atcccctaag ccgagctcgc cgtcgccgtt gtagccccag cagcgcacgc catcgagcga
     1321 agcggcgcag gtgtgtgctc cgccggccgc aacggcgaat acgttgagat cgccggcgag
     1381 atcgatgggt ccgagcgcgt cgccgagctc gcccggctga tcgccgaggg gttcggtgtt
     1441 gccgcggccg agctcgccgt tcgcgttgtc gccccaacat ttgagcacac cgcccgcgcc
     1501 gagggcgcac gtcgtcatgg ccccagccgc gagctcccgt ggttcgccgt gacatgacgg
     1561 cgagcagccg tcgccgctcg cggtgttgcc gtcgtcgcac gtctcctcgc cgcgccaaag
     1621 caagccgtcg ccgcagcgcg cctgcttgca gagcccggtg caggcgtcct ggctgctcag
     1681 attgccgtca tcgcactctt cgcccggatc gacgacgccg tcgccgcagc gcgaaggcat
     1741 ggagcctgcc gcaccccctg atccggcgcc gatccccccg gccccagcga agaagccgcc
     1801 gtcgcccgcc gttcctgcgc ggccgccgaa agagcctcta ccggcgaacc cagcgcgacc
     1861 accgagcgcg ccgcgaccac cgaaccccgt gcggcccccg agcgccgtcc cacccgatcc
     1921 gccgttgctc gcgggtcgcc cccccgcgcc gcgtccgccg agccccgcat ctcgaccggc
     1981 tcccgaagcg ccgccgcgcg ccgacctgcc tgcctgcgcc ccgctagccg tcccgcccgc
     2041 gtcgagcggc tcgagcagct cggttcggcc gcaagccgcg caagcgatga gcgcgatccc
     2101 ggctcgccat cggaccatcg acgtcctcac tcccgggcgc catcattctt ctgaccgcga
     2161 gcgaacgcaa gccccgcctc cggctcgtgc ccgctgagcc cgaggctgcg ctcgagctca
     2221 actgggaccg aacttgggcg taacgccgag aaacaagccg gcacggtcgc cgcccgccac
     2281 gaaaccgtaa aagccgacga gtgaaagatc gagccgtggc gttgcgttcc agtccaggcc
     2341 gagcgtcgtg tgcacgtcgt gtggatcggg tccgaacgcg tagccggcgc cgagctccgc
     2401 gagcaaggac cagcggtttt cgacatccaa atcatagtcg aggtcgaggc cgcccacgag
     2461 cgcgaaggaa cgcagggcct cgctgcgatc cacgggctcg agcacggcgc caagatttac
     2521 gatgaagtgc cacggcggcg ccatgcgcgc gccgagcagc acggcgccga accccgtgcc
     2581 gaccgagtga ggggccgtgg gcaagcgcgg accgagctgc gcaccgagcg cccaggcgcg
     2641 gtccggatcg aatgggtcgc tgtcggcgta gaagccgagc ttggtgctga cccacaggtt
     2701 atcgcccgcg aaagtgaagc gtcccgactg acgatccagc gagagcgcgc cgtcgacgtc
     2761 gagctcgacg cgagacgtga gcccgaaatc gagctcgaaa tcgggcacga acactcgcaa
     2821 attcggttcg ccgtcgcgct tgagcacgcc gaactgcaga tcgagctcga gcgtcagcgg
     2881 atcttccaac tcgagatcgg tcggctcgaa cgccgggacg cggtgacgca aacgcgcctg
     2941 cgccggcgcc gcagcgaaga gtgcgactac cgtgagccgg acgcattcgc gcagacgcac
     3001 gcgcgcgagc ctactcggcc ccggctaata cttcacgacg ttctggcagc tagcgggcaa
     3061 atcgctcgcg tcagtcacgg cgtcgatcgc ttcgcaatcg ccggctttga tgtccgcgac
     3121 acacgcatcg atggcgcgct ccgagctcgt cgccttcttg gcgcaggcgc ggccgcagca
     3181 ctgatcgacg ccgggattga tgcacgtttc gggatcttgg ccgtaacatt cctgggtgcg
     3241 tgcgcaaaag gccgtgacga tgcgcgtgca ctgatcctcg accgtcgagt tggtcggctc
     3301 gccagcgtcc gcccccgcgc taccgtcgtt cgcatcgggt ccgatctgaa tgcagctcga
     3361 ggagcccagc gttccgaggc agatgccgaa aggcaccacg aaccaagacc agcgcagggg
     3421 cgttaccaga cggcgagcca cgtcgcgagc atacctccgc tgagcggaat ggcgacgagc
     3481 gtgccgtgcg cgaggcccga gcgcggcccg tcgccgctct gagcgaaact ttggccgacg
     3541 ctcgacccga tggcctcgcc caggagcgct ccggacaaaa tgtcggaagc ccaatgccga
     3601 tcgccgagcc acatgcccgc ggcgaccccg gcggcaagcg gatagcccaa aaacctcggc
     3661 cagccgagct cgtcttcggc ggcacggaac gcggccgcgg cggcgaacat cgagagcgtg
     3721 tgtccgctcg gccaggcgcc caccagttgg aaggggtgaa aagtgtacgc atcctcggga
     3781 tggtccagcc gatccggcgc gttcggatca cgactgccgt tcggccactg ccgcccgaca
     3841 ctccacttga gcacccccgt gaccatgaac ccgcccgcca tcccctggag gatggccgac
     3901 aacggccgtt cgacctcgca agcgcccagc gccgcgctca cgccgaaagc gaccagggcg
     3961 ctgccggcga ggacgtacgg tgtgaaattg ctcaccgatt cgatgcggta gcgtcccccg
     4021 agatcctcct gagcaacgag tcgcagatca tgatcgacgc cggtcggcgc catcgccatc
     4081 agagggaggg gtgagagcgc cgcgagcgtg accggtagcg gttcggtgaa atgcgcgagc
     4141 gaggtgccga cgcgattcca cggcgcgagt cgattgcatt cgccttcggc ggggcgcgcg
     4201 aacccgagcg agagcaacgc gaggaatgcg gcgacgtttc gcggagccac gacgagtctc
     4261 gacttgaacc gtgttggacg aggcgagtgc atcaaccctg aatcgtctcg ctgcgagacg
     4321 ccgatcgaaa catacgacac gggccttaac tcgtacttcg ggtgcccgtc taggagcgcg
     4381 ggggacgttc tcttacacgc acgccccccc ggggtttctc aggaaaagac acgcatgctt
     4441 aaagccagaa ggcccacgct cggcccgttc gcccgtcgct cctcaccgcc gagcttcgga
     4501 ccggagcagg aactcgacga tcacgttcgc cgtgagagca tgatcgcccc actcgggagc
     4561 gcgccgtcgt cgtggcctgc ggccgtcccg cgagtcagcg tctccgaggc gctggtcgct
     4621 gcgctcgtcg ggttcggtgt cgaacacgcg ttcggcgtgt ttggcggcgg gatcgcgccg
     4681 ttctgccagg ccgtatcgca gagccccatc cgcctgatcc actgccggca cgaagcgagc
     4741 gccggctttg cggccatcga gtcttcgctc gcgacgggcc gccctgcgct cgtcatcgct
     4801 acgacgggcc cgggcatcac gaaccttcac accgcgatgg tggcggcccg cggcgaaggc
     4861 gccaaggtgc tcttcgtctc cgggtcgacc gtcgccgctc agcgcggccg caacgcgttt
     4921 caagaaacgg gcggcgcgtt ctcggcgctt tcgccgctgt tcgtcgccgg cagcacgttc
     4981 caccacgccg gtgtgatcga ggatccggcc gagctcgaca gcctgctttc gcgtctagcg
     5041 agcgggttct cgcgccctca cggcttcgtc gcgcacctcg gcttgccgct cgccctccag
     5101 acggcgcggc gcgctccctc acgcgcttgc gtcacgacct cgccgccgcc cgtttgcgac
     5161 agcttgctcg tcgccgaatg cgccgagctc ctcgctcgcg aggacttcgt gatctgggcg
     5221 ggccacgggg cgcgccatgc ggccgaggaa gtgcgcgcgc tcgccgagcg cacgggcgcg
     5281 cgtgtcatgt gcacgccgcg cggcaaaggc atcttgcccg aacgtcatcc gctctacctg
     5341 ggcgtcaccg gcctcggcgg acacgccgcc gtcggcgagt acctgacgcg ggcccgtccg
     5401 gcgcgcgtgc tcgtgctcgg cagtcgactc ggtgaaatgt cgtcgttttg ggcgcccgag
     5461 ctcgtgcccg cgcgtggttt cgttcacgtc gatctcgata gcgaggcgtt cggcacggcg
     5521 tacccggagg tgccgacgct cgccgtgcag gctgagattc gctcgttctt acgcgatctg
     5581 ctggtggcac tgccggccac ggtcgccaac gacgccgtgc gtaccgaaga ccccgcgtcc
     5641 gaaccagcgc tcacgccacg cgcggacgcc gccgtgcggc cgagctacct catgcaggtc
     5701 atccaacgca cgatcgtcga gggcagctcg gccatcgtga tgacggaggc gggcaattcg
     5761 ttcgcgctcg gcagccatca tctgcgtttc cccgacgcgc gacgctatcg cgtgagcacc
     5821 ggcttcggct cgatgggcca ggctgccgcc ggcgtgctcg gcgcggccat ggcgcgcggc
     5881 aacaaggcgt tcgccatcgt cggcgacggc gcgatgctga tgctgaacga gatcaacacc
     5941 gccgccaact acggcatcgg cgccgtttgg atcgtcctga acgacgcgcg ctacggcatg
     6001 atcgagcaag gaatgcagtc ggtcggctgg cagccgttcg aaacggactt tccgcgcacc
     6061 gacttcgtcg ccgtggcgcg cgcgatgggc ggcgacggca tccgcgtcga tcgcgaagcc
     6121 gctgtcgccg aagcgctcga ggcggggctt tcatcgctcg gcccgttcgt catcgacgtg
     6181 atcatcgatc ccaccgaagt tgcgccgagc gtccagcgca acaagagcct cgcgcgccaa
     6241 gggctcagca gcgcgccggg gcccttcgga gacgtcggac gctagaggcc ggcttgctgg
     6301 cctggtcccc attttcgggg acgcactccc gcttccccat ccaattaccc caagaccaaa
     6361 gacattcttg gcacaaactg gcgccgcgtg aattcgacgc caacgtacgg gtccccgtgg
     6421 cagcaaaaac accccccaat ccccccgcgc cgacgaccac tggcaaagac gccgacgcaa
     6481 cccccgagca cgcgccctca ccgttcaacc gacatttcca agcgccgcgc cgtcccaaag
     6541 cggcgcgcga gccgagcggc cgcgtgctgc cgcctgctcc ggcttggatg gcgaagcccc
     6601 tcaagccgcc gcgcgctccg tcgcgcgact aggctcgctc aggacgagcc gcgagttgcc
     6661 gctcgactcg cggctcgtgc gagctcggcg taacgctaga gctcctcgac gctgccgcta
     6721 gcgatcgatc gtcgccatct gcgccgcaag gtagcgcggc cccgtcggcg ccatcagctc
     6781 gtcgagctcc ttctgcgcgg cgtgcgtgag ctcgacgtcg gccgcggcca ggttctcttc
     6841 caaatacgta cggcgcttcg tgcccggaat cggcacgatg tcgtcgccgc gcgcgagcag
     6901 ccacgcgagc gcgacttggc tcggcgtcgc gccgagcgtc tcggcgatgt cgcgcacgcg
     6961 cgaggcgatg cgcatgttcg cgtcgaacgc ttcgccctgc agccgtgggt cgctcgtgcg
     7021 ccgatagtcg ccttccgggt attcgtcggc gcgcttggcc gtgcccgtga gaaagccgcg
     7081 tccgagcgga gaaaacggaa ccaagccgac gccgagctcg cggagcagcg ggaggatttc
     7141 ggcctcgagg ttgcgttccc acagcgaata ttcgctttgg agcgccgtga gcgggtgcac
     7201 gcggtgcgcg cggcgaatgg tgtcggcgcc agcttccgaa agccccagat aacgcacctt
     7261 gcccgcctgc acgagcgcgg ccatggcgcc caccgtgtct tcgatcggca cctgcttgtc
     7321 gacgcgatgc tggtacagca aatcgacgtg atcggtgcgc agccggcgca gcgagccttc
     7381 gacggccttc tgcacgcttt cgggacggct gtcggtgccg ccgagcttgc cgttctcgaa
     7441 gcggaagccg aacttggtgg cgatgatcgc gtcgtggcgg cggccttcga gcgcgcggcc
     7501 gacgagctcc tcgttcgtga aggggccgta gatctccgcg gtgtcgaaga acgtgacgcc
     7561 gagctcgagc gcgcggtgga tcgtcacgat ggattcggcg tcgtccggcg taccatacgc
     7621 gtggctcatc cccatgcagc cgagtccgag ctcggaaact tcgagtcctt ggcgtcctag
     7681 cttgcgggtg ttcagcatcg tttgcctctg ttccgagcct tagcgcgcgc ccacagcggg
     7741 agcgaggcgg cggtggttcc atgccgcgcc aatgcggcga gcaaggtgta ggccaacgcg
     7801 cgcttcgggc cggctttttg gttgaatggg gcacgcgcga gtgcacgctg ccgcggcgaa
     7861 gtggcgcgct ggggcattta gctcctcgac gcgatgagca acgcctgacc ctcgcgccgt
     7921 agtctgctat ctgacacgcc gacgagcgtc gcgcttacaa gccaagaaca cgaacggcct
     7981 gagccatgaa gacctgcgaa tacgcgggtg cgccgttcga ggacgcgcgt tcccaccctt
     8041 ggagcgacat gcgagtgtcg agtagcgcgc gctactacga cttgatcacg agccccgagc
     8101 acatccgaag ctcgatggag gacttcaagc cttgggcgca gtacccggcg atcgaaacgt
     8161 tttacgcgct cttggagcgg ctcaaccata aaaactccat gctcgagtcg aacgattgcg
     8221 ctttcgacgg gccacatgcg aacgaaacgg ccgggagcga cgccgcactc gaatgctcgg
     8281 ggcgcgtgat gctgtttttt cgcgtcctga cgcgcaacac ggcgggcgct gacgtgctct
     8341 ggttgaagaa cgagctgcac cacgcgctcg gcgcgctcga tccagagttc gtgagcggcg
     8401 tcgtgggcac gacgctcgtc cccgttcgct acctgcgatt gcccgagacg aacgaccagc
     8461 agctcggccg tgagctcatg atttcgtttt gggcctgggg cgatacggag gccgacaaca
     8521 tgcgaaatct cgggcggttg ctcaagaatc tgacgcaagc agtgcgcaaa gtgatgtcct
     8581 ccagccgcgc gcggggctga gcgtggcgcg tcggttgcat cgcgccgcgc tgcggaggac
     8641 gcttggcaga tgatcgatca caaggagttc gaacgccgcg tcaaggtgcg caggctccag
     8701 agctcggact acgagcgcgt ggtggagctc cagaccttgt gctttccgcg catgaaagcc
     8761 tgggacctcg aacaattttc gagcatgctc cgcatcttcg gcgagggcca aatcggggtg
     8821 gagctcgacg gtagtctcgc ggcctcgagc tcgagcctca tgctcgattt cgacctttac
     8881 agcgagtggc acgattggac gaagatctcg gacaacggct acatcagaaa ccacgatccg
     8941 cgcggcaaca cgctgtacgg catcgaaatc atggtgcacc cggagcagcg cgggctccgg
     9001 ctcgccagtc gcatttacga cgcgcgcaaa gagctctgtc gcgagaaaaa tctcgagcga
     9061 ctcgtgatcg gcggcagaat tccgggctat gcgcccaatg cggcgcagat gaccgccgag
     9121 gagtacgtcg cgcgcgtcca agccaaggag ctctatgatc cggtgctgac gacccagctc
     9181 gccaacggcc tcgtcgtctt gcgcttgatc cccgactact tgccctcgga cgaagactcg
     9241 gcgggctggg cgacgcacat ggagtgggtg aacctcgcgt tcgtgcccga cgacaagcgc
     9301 gacttgcggc cgacgcgcaa cgtgcgtgtc gcggcggtgc agtacgagat gcggcgcatc
     9361 gcgagcttcg aggagttcga gcgccaggtc gagttcttcg tcgattcgag cgccgactac
     9421 cgcgccgatt tcgtgctctt cccggagctt ttcacgttgc agctcttgtc gctcgcgccc
     9481 ggggcgtcac ggccgggcga ggcggcgcgt agcctggccg agcacacgcc gcgctacctc
     9541 gagcttttcg gccgcttggc catcaaatac aacgtgaaca tcatcggcgg cagccagttc
     9601 gccgtcgagg acggcaagct cttcaacgtc gcctaccttt ttcggcgcaa cgggacgatc
     9661 gaccgccaat tcaagatcca cgtgacgccg tcggagcgcc gctggtgggg cgtcgagggc
     9721 ggctcgcgtc tcgaggtgtt cgaaaccgac cgcgggcgca tcgccatcct cgtttgctac
     9781 gacatcgagt ttcccgagct cgcgcgcctg gcggccaagc aaggcgcgca aatcctgttc
     9841 tgccccttca acaccaacga acgttcggcg tacttgcgcg tccgccattg cgcgcacgcg
     9901 cgctgcatcg aaaaccacgt gtacgtggtg ctcgccggct gcaccggcaa cctgccgcag
     9961 gtcgaaaacg ccgacattca ctacgctcag tccgcggtgc tcaccccgtg cgacctgttc
    10021 ttcgcccgcg acggcatcgc cggcgaatgc caagcgaacg tcgagaccct cgtgatccac
    10081 gacgtggacc tcgagctctt gcgccgcgcg cgttacaccg gcgccacgct gaactggaac
    10141 gaccgccgta ccgatcttta tcgcatcaac taccgctcga ccgacggcgg aaacgacgta
    10201 tgaacgcggg tccacgcgcg gcgtgacttc ggcatagact cccttacccc atggatcgcg
    10261 ctgccgtgtt cgtcgatgcc ggctatctgt tcgcggaagg ctcgcgcctg ctcgccggtg
    10321 aaaagctccg gcgcagcgcg ctcaggctcg accacgacaa gatcctgaag ttcttcgccg
    10381 agctcacgcg cgagctcacc gccgtgccgc tgctacgcgt ctattggtac gacggtgcga
    10441 ctgccgcgcc gaatccggcg cagacggctc tcgcgtaccg gccgaacgtg aagctgcgcc
    10501 tcgggctcgt ggacgaacga ggccaacacg gcgtcgattc gctgttggtc gcggatctcg
    10561 tcacgctcgc gaaaaatcgc gccatctgcg acgctttgtt gctttccggt gacgacga
//
LOCUS       DATIML010000969         3727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2226477, whole genome shotgun sequence.
ACCESSION   DATIML010000969 DATIML010000000
VERSION     DATIML010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3727
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2226477"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="VLJ38_16765"
     CDS             <1..365
                     /locus_tag="VLJ38_16765"
                     /inference="COORDINATES: protein motif:HMM:NF033768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AgmX/PglI C-terminal domain-containing protein"
                     /protein_id="HSU41233.1"
                     /translation="LGPSGPGVSGANPGSTPSGGGGQLDAAQTQSTVARYTGSVKRSC
                     WQPALDSRDPNAPTSARVMLTITVGGTGSVSNVTTSGDPHGYPGLANCIAARVHSWTF
                     PATGGTTTVNVPFVFAAQ"
     gene            602..823
                     /locus_tag="VLJ38_16770"
     CDS             602..823
                     /locus_tag="VLJ38_16770"
                     /inference="COORDINATES: protein motif:HMM:NF036497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSU41234.1"
                     /translation="MLGGIPVWGVAPGSSARQAGVRFADIILAVNGVPTPTFEDFLRA
                     GRANLMHLEFKVFRDGRVIKLHYDEPVDA"
     gene            complement(888..1264)
                     /gene="rnpB"
                     /locus_tag="VLJ38_16775"
     ncRNA           complement(888..1264)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VLJ38_16775"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(1344..2225)
                     /locus_tag="VLJ38_16780"
     CDS             complement(1344..2225)
                     /locus_tag="VLJ38_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41235.1"
                     /translation="MADFHSGEIGTYLARVRSYPVLSREDEQELMARWMGLHEEPARD
                     RLLAAHLRYVVAIALRYRRYGVPVEELVSEGNFGLVHALGKFEPGRGTRFVTYAAYWI
                     RAYVLNHVIRSWSLVGVGSGALRSKMFFRLRRERVKIANLVGDGDQADALLAQAMGLP
                     EATVQAMVRRLDARDVSLDTKPFDDSSSSLGDLLAAPDRSQEETLAASERDDQVRIAV
                     RSAMSELDERERYIAENRLMADHDDELSLAEIGRRLGVSRERARQLEVRTKRKLRRRI
                     EELSRRAGDRLSLDSAA"
     gene            complement(2391..2714)
                     /locus_tag="VLJ38_16785"
     CDS             complement(2391..2714)
                     /locus_tag="VLJ38_16785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HSU41236.1"
                     /translation="MISITELAADKVKEISRSEGLDGQGLRLRVIGGGCAGFQYDLYF
                     EDKPTDLDERFQSNGVELYVDPLSFQYLDQTEIDYVESPHGSGFKFANPNVSSTCGCG
                     SSFKA"
     gene            2994..3623
                     /locus_tag="VLJ38_16790"
     CDS             2994..3623
                     /locus_tag="VLJ38_16790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41237.1"
                     /translation="MAEPPPPLPPTQLGRPVIDVSVPPPAPPEQRRYHMHDGFYLRID
                     AGFNFARTNVSGDGPYHPSYSVGGAGFALDALVGGSPSVGFALGGAISIQGFGYGGDG
                     SAGLGLLGVFVDGFPMANDGLHLGGSLGFASSRTSRPGGVDELRGRGFGGSAWLGYDW
                     WVADEWSMGSLVRVSGAGTQDNSHDNGPDPYKLSSGSYEVAILFSVLYH"
BASE COUNT          577 a         1332 c         1203 g          615 t
ORIGIN      
        1 cgctcggccc ctcggggccg ggtgtaagcg gcgcaaaccc cggtagcacg ccgtccggcg
       61 gtggcggcca gctcgacgcc gcgcaaacgc aaagcacggt cgcgcgctac acgggcagcg
      121 tcaaacgcag ctgctggcaa ccagcgctcg actcgcgcga tcccaacgcg cccacgtcgg
      181 cgcgcgtcat gttgaccatc accgtcggtg ggacaggcag cgtgtcgaac gtcacgacga
      241 gcggcgatcc gcatggctac cctggcctcg ccaattgcat cgccgcgcgc gtgcactcct
      301 ggaccttccc cgcgacgggc ggcaccacga ccgtgaacgt gccgttcgtg ttcgcagcac
      361 agtaactccg cgtgaggccc gccgcacagc gactgtcggc cgccgcggcc tagagcgaga
      421 cagtcagcgt ctcgacctga gacgcgcaag ccagaactca gcgcccggtc tcacgcaaac
      481 cagcgtctgc acaccgatgg agcgcggcac gtttcgtgaa aggtgtcccc gcatggctca
      541 tgaccgggaa cttcgacacc cagccggaac ggctcttgcc cgaatcgagc ggctcgctcg
      601 agtgctcgga gggatcccgg tctggggagt cgctcccggc agctcggcgc gccaggccgg
      661 cgttcgcttc gcggacatca tcctcgccgt caacggtgtc ccgactccga cgttcgagga
      721 cttcctccgc gcgggcaggg ccaacctgat gcacctcgag ttcaaggtgt ttcgtgacgg
      781 gcgcgtcatc aagctccact acgacgagcc ggtcgacgcg tgagcgcacg cgcgcggcat
      841 gtgatgggaa ggacgcgaaa ataaacacgc ccggctttca ccgggcgtgg tcgcagggtt
      901 cgtaagccgg gttctgttgc gcgcgcgagt cgcctcgcgc gtgccggcgg tcattcctct
      961 gggacgcgcg ttaccgcgcg cctcgtgcgg cctacccaga agctcgggcg ggcaaccctc
     1021 gaacgctcct ctacgtggcc ttgctccgga tggggtttac cgtgccgcgt ccgttaccga
     1081 acgcgcggtg ggcgcttact ccaccttttc acccttgcct cggccgtgaa gcggaggcgg
     1141 tttgcttttc tgtggcactt tcctcgaggt cgccctcacc gggcgttacc cggcatcctg
     1201 ccctgtggag cccggacttt cctctcgacg gacaatccgt cgagcgatcg cctgagccgc
     1261 tgcggcggcg cgaccttagc accgccgggc gcgacgctcg tcatccaaac gtcacgcggc
     1321 cagcggcggc cgtgcggcag ggctcacgcc gccgagtcga ggctcaagcg atcgccggca
     1381 cgccgcgaaa gctcctcgat gcgacggcgc agcttgcgct tggtgcgcac ctcgagctgc
     1441 cgcgcccgct cgcgcgacac gccgagccgg cggccgattt ccgcgaggct gagctcatca
     1501 tcgtgatcgg ccatcagccg attctccgcg atgtagcgct cgcgctcgtc gagctcggac
     1561 atcgcgctcc gcacggcgat gcgcacctgg tcgtcgcgct cgctcgcggc gagcgtctcc
     1621 tcttggctgc ggtccggcgc cgccaagaga tcgccgagtg agctcgacga atcgtcgaag
     1681 ggcttggtgt cgagcgaaac gtcgcgcgcg tccaagcgcc gcaccatggc ttgcaccgtc
     1741 gcttccggca gacccatcgc ctgagcgaga agcgcgtccg cctgatcgcc gtcaccgacg
     1801 aggttcgcga tcttcacgcg ctcgcggcgc aggcgaaaaa acatcttgga gcggagcgcg
     1861 ccggagccca cgcccacgag gctccacgag cgaatgacgt gattgagcac gtacgctcga
     1921 atccaatacg cggcgtacgt cacgaaccga gtgccgcgac ctggctcaaa cttgccgagc
     1981 gcgtgcacga gcccgaagtt gccttcgctc acgagctcct ccaccgggac gccgtagcgc
     2041 cggtagcgca gcgcaatcgc gaccacgtaa cgcaggtgag ctgcgagcag acggtctctc
     2101 gccggctcct cgtgcaggcc catccagcgg gccatcagct cctgttcgtc ctcacggctg
     2161 agcaccgggt acgagcgaac ccgagcgaga tatgtaccaa tctcgccgct atgaaagtcg
     2221 gccatccttg actccgagcc ggcacggaag cgccagtctc gagagcggtt acgagggccc
     2281 tcgtgcagaa gttgcggctg ccgggcagtt aggacgccct gcaacacaac ttggacgaac
     2341 gagcaggttc ggctggaggg ccgttccgcc ttctgggtgg agcggttggc tcaggctttg
     2401 aaggacgagc cgcagccgca ggtcgagctc acgttcggat tcgcgaactt gaagcccgag
     2461 ccgtgggggc tctcgacgta gtcgatttcc gtctgatcca ggtactggaa gctcagcgga
     2521 tcgacgtaca gctccacgcc attcgactgg aaccgctcgt ccaaatccgt cggcttgtcc
     2581 tcgaaataga ggtcgtactg gaagccggca cacccgccgc cgatcacgcg caggcggagg
     2641 ccctggccgt ccaggccctc ggaccgggaa atctctttga ccttgtctgc ggcaagctcg
     2701 gtgatgctga tcatgggtcg tcttctctac tgttgagcct tgtccctgcc gtgaggtggg
     2761 acaacggccg aaccgctccg taatataggc ccgtgccacg tccttcgcca caccttcgcg
     2821 tacttgtgct cttggctttc gggcttccct gcggaatcgc tggcgcgcag ccagcgcccc
     2881 tgccgcctcc cgtcgcaccg ccggcgcctc ctcctcccgc gcctgccagc ccagttgaag
     2941 cgcctaccgc ccaaccggcc ccagcgcccg ctccgcccgc cgccgccccg gccgtggccg
     3001 agccgccgcc gccgctgccg ccgacgcagc tcggccgacc cgtgatcgac gtgagtgtcc
     3061 ccccgccggc gccgccggag cagcgccgct accacatgca cgacggcttc tatttacgca
     3121 tcgatgccgg cttcaacttc gcgcgcacca acgtgtcggg cgatggcccg taccacccga
     3181 gctactcggt cggcggcgcc ggtttcgcgc tcgatgcgct cgtcggcggc agtccgagcg
     3241 tcggctttgc gctcggcggc gcgatctcga ttcagggttt cggttacggc ggcgacggat
     3301 cggccggact cggcttgctc ggtgtcttcg tcgatggctt tcccatggcg aacgacgggc
     3361 tacacctcgg cggctcgctc ggtttcgcca gcagccgtac gagccgcccc ggcggcgtcg
     3421 acgagctgcg cggccgtggc ttcggcggtt cggcgtggct cggctacgac tggtgggtcg
     3481 ccgacgaatg gtcgatgggg tcgctcgtac gcgtgagcgg cgccggcacg caggacaact
     3541 cacacgacaa cgggccggat ccgtacaagc tctcgagcgg cagttacgag gtcgccatcc
     3601 tcttcagcgt gctttatcac tgaggccgcg caaaaggccc gaacggcacg ccgccacgag
     3661 ccggttcggt ccgacgggcg tcacgcggac aggatcgggg cagcccgtcc caggcacgcc
     3721 cgtggct
//
LOCUS       DATIML010000970         1710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3382525, whole genome shotgun sequence.
ACCESSION   DATIML010000970 DATIML010000000
VERSION     DATIML010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3382525"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..505
                     /locus_tag="VLJ38_16795"
     CDS             56..505
                     /locus_tag="VLJ38_16795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HSU41238.1"
                     /translation="MNGMSDKTPLAPGLTATLSFVVPEQKTVPHLYPEAPEFRTMPAV
                     FATGFMVGLIEWACMRAIAPCLDIPAEQSVGTDVRLNHTAATPPGLTVTVHARLERVE
                     GRKLGFAVSAHDGVDEICRGTHERFVIDTARFEAKTREKRARALSNG"
     gene            517..1506
                     /locus_tag="VLJ38_16800"
     CDS             517..1506
                     /locus_tag="VLJ38_16800"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSU41239.1"
                     /translation="MPSRIPPIPDPDPEQYRAARELASRAAEPAVAGNVLFGTVGWTD
                     PTLLKAGTFYPKGAKTARDRLGYYARHFSLVEVAATYYSLLPRENAEQWVEATPPNFV
                     FDVKAHPVLTTHPIDVARLPRDLKAACVRAGFESRVYPAKLPAELRAEIEGRFRALLE
                     PLVAAGRLGAVVLQFPAWFVRSRENIAELERLAASFHDVPLAVEFRHETWLAANGRDH
                     TLDLLRRSAMSYVCVDEPAVAGAVPPVLAVTNPKLAIVRFHGRNSAAWTKRGASVHER
                     FDYLYSPAELTPWVASLEKLADEAETVHGSFNNCVRDYAVLNAKDLAVLLQER"
BASE COUNT          267 a          603 c          567 g          273 t
ORIGIN      
        1 cggcgcgagc gcgggacgcg gcaggccctt gcgttcggcc ggcccgaggt cttaggtgaa
       61 cggaatgtcc gacaagacgc cgcttgcgcc cggcctcacg gcgacgctct cgttcgtcgt
      121 accggagcag aagaccgtgc ctcatctcta ccccgaggcg cccgagtttc gcaccatgcc
      181 cgccgtcttc gcgaccggct tcatggtggg tctcatcgag tgggcgtgca tgcgcgcgat
      241 cgcgccgtgc ctcgacattc cagcggagca gtcggtcggc accgacgtgc ggctgaatca
      301 cacggcagcg acgccaccag gcctcacggt gaccgtccac gcgcgcctcg agcgggtcga
      361 aggccgaaag ctcgggttcg ccgtgtccgc gcacgacggc gtcgacgaaa tttgtcgcgg
      421 cacgcacgag cgcttcgtga tcgatacggc gcggttcgaa gcgaaaactc gcgaaaaacg
      481 cgcccgcgcg ctctcgaacg gctagcgctc ctcgccgtgc cttcacgcat cccgccgatc
      541 cccgaccccg accccgagca ataccgggcg gcccgcgagc tcgcgtcccg cgcggccgag
      601 cctgccgtcg ccggtaatgt gctgttcggt accgtcggct ggacggatcc gacgttgctc
      661 aaggccggca cgttctaccc gaaaggcgcg aagaccgcgc gtgatcggct cggctactac
      721 gcgcgccact tttcgctcgt ggaggtggcg gccacttatt acagcttgct cccgcgtgaa
      781 aatgccgagc agtgggtcga ggcgacgccg ccgaacttcg tgttcgacgt gaaggcgcac
      841 cccgtgctca cgacgcaccc catcgacgtg gcgcggctgc ctcgggatct caaagccgcg
      901 tgcgtgcgcg cgggcttcga gtcgcgcgtc tatccggcga agctgcccgc ggagctgcgc
      961 gctgaaatcg aagggcgttt ccgcgcgctg ctcgagccgc tcgtcgccgc ggggcggctc
     1021 ggcgccgtcg tgctgcagtt tccagcctgg ttcgtgcgca gtcgggagaa catcgccgag
     1081 ctcgagcgtt tggccgcgag ctttcacgac gtccccctcg ccgtggagtt tcggcacgag
     1141 acgtggcttg ccgccaacgg cagggaccac acactcgatt tactgcgccg ctcggccatg
     1201 agttacgtct gcgtcgacga accggccgtg gccggcgccg tcccgcccgt cctcgccgtc
     1261 acgaatccga agctcgcgat cgtgcgcttc cacgggcgca acagcgccgc ctggaccaaa
     1321 cgcggcgcct ccgtgcacga gcgcttcgac tacctgtatt cgccggccga gctcacgccg
     1381 tgggtcgcct cgctcgagaa gctcgccgac gaagcggaga ccgtgcacgg cagcttcaac
     1441 aactgcgtgc gcgactacgc cgtactgaac gcgaaggacc tcgccgtgct cctccaggaa
     1501 cgctaacggc gggcctggtt ttgatgagga ttcttagacc accgccaggc accgggcggc
     1561 ataggctgaa aagcaagccg gggcggcatg ggtctgcgtg cccgacgagt cggccggatt
     1621 ggtagcgctc cgcggcacgg gctacgctaa acgggtcatg ggtgagccct ccgccgtcga
     1681 agtccggcag cgcctgaggc agagctacgc
//
LOCUS       DATIML010000971         2957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2226852, whole genome shotgun sequence.
ACCESSION   DATIML010000971 DATIML010000000
VERSION     DATIML010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2226852"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VLJ38_16805"
     CDS             complement(<1..496)
                     /locus_tag="VLJ38_16805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41240.1"
                     /translation="MHSRSWIVAASSVAFMSACGSNHLSEDTGRSEAQLEGAASELAA
                     GPAADLSDPAFADTSRLAHTPSQRLATGQWITPTALRGAVQQVLNPGLANYPNFIAGE
                     AVRSQLSPDGATLAVLCAGQNSLYAPDGTVDTANSTQYIFLYDVNGPNKRSPVLKQVL
                     KPVNS"
     gene            703..2460
                     /locus_tag="VLJ38_16810"
     CDS             703..2460
                     /locus_tag="VLJ38_16810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41241.1"
                     /translation="MDTAKSLPLNVWGRRGLALAWLATGVLTLPALRAGFLLDDFIQR
                     LVLEGQAPELGLGPTSLYDFTGGGLHMTEWLERGYVPWFTDPGFSIRFFRPLSSLSIA
                     LDERLFGRAPLGSHLVGAALFVAFTAVAFGFFRRILNPNRAGLAAVVFALAGGHGANL
                     TWVAGRHVLVGGIFGALAVALHVRRRERASAGALPAWIAPLALLCSMLASETSLAAAS
                     IIAAYELFGTDAKPRQRALAAAPWLAAMLVYVALYSIAGFGVRKSLLYISPAFAPLAF
                     LQAALTRAPMLAGELSFAVPAGVWGAGASARPLFAVIGIAATALVFGLAWRGAASQAE
                     RRRVRWLAVSALVSVLPMVGGVPDGRVLLLPMLASAPLVALAIDAAFFNPAESRRKLA
                     RAGGAALVFMHLVVAPLVRLGTTELMVSVGRKQRTLAESADFSQCAPGSPLFLVTGAD
                     PALCLSGGTSLRYYRPELPARHPSFAVLSLAPHDLELERPSERELVLSVDAKRRYPTL
                     FETLFRDTPLVAGQSVRFEHFAARVLAVEDGVFMRAAFELPSNACLLTLERQKLVGRP
                     EPTVGAKLHVVHEPGPLGL"
     gene            complement(2487..>2957)
                     /locus_tag="VLJ38_16815"
     CDS             complement(2487..>2957)
                     /locus_tag="VLJ38_16815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41242.1"
                     /translation="DDGVAMFFQTDVLVRGVWIDKSFLVLSAAQASGHQLVWHKIVCR
                     TAPGSLSPGRPGYSHLLCFAREARPAFRHLLPDVLPDPGFEPSPKAMGVEACALAVRF
                     ALAETNVRTIVDPFCGQGTALAVANAFGLDAVGVDRSERCCRAARKLTVAVDAR"
BASE COUNT          414 a         1007 c         1006 g          530 t
ORIGIN      
        1 gcgagtttac gggcttcagc acttgtttca gcacgggcga gcgcttgttc gggccgttca
       61 cgtcatagag gaagatgtat tgagtcgagt ttgccgtgtc cacggtgccg tccggcgcgt
      121 agagtgagtt ttggcccgca cacagcacgg cgagcgttgc gccgtcgggg ctcagctgag
      181 agcggacggc ttcaccggcg atgaaattcg ggtaattcgc caagccgggg tttaggacct
      241 gttgcaccgc gccccggagc gcggtcggcg tgatccattg gccggtcgcc aggcgctggc
      301 tcggcgtatg cgcgaggcgt gaggtatcgg cgaacgccgg atcagaaaga tcggcggccg
      361 gccccgccgc gagctcgctc gccgcaccct cgagttgagc ctccgagcgc cccgtgtctt
      421 ccgacaggtg attcgagcca caggctgaca tgaatgcgac agagcttgcc gcgacgatcc
      481 acgaacgtga atgcatgacg tgtctcctct gaaatcgcgg ccaagctaac agaggtcacg
      541 tgcagcctcg ggcacgcgcg agtgacatga tcggcagctt ctgacgacgt atgtgaagga
      601 acgacaacgt tcgtgaccgc gcggcgcacg ctcgatgatc tcttcgcttc gcgcgggacg
      661 cacgcgggcg tagcttggcg tgaacttcac gacgaaatgc ccatggatac agctaaatca
      721 ttgccgctca acgtctgggg ccgccgcggc ctagcgctcg cttggctcgc gaccggcgta
      781 ctcacgctgc ccgcgctccg cgccggattc ttgctcgacg atttcatcca gcggctcgtg
      841 ctcgaggggc aagcccccga gctcggcctc ggcccgacgt cgctctacga tttcacgggc
      901 ggcggcctgc acatgaccga gtggctcgag cgcggctacg tgccgtggtt caccgatccc
      961 ggcttctcga tccgcttttt ccggccgttg agcagcctgt cgattgccct cgatgagcgg
     1021 ctgttcggcc gcgcgccgct cggctcgcac ctcgtgggcg cggcgctatt cgtggccttc
     1081 acggcggtgg cgttcggatt tttccgacga attctgaatc cgaatcgcgc cgggctcgcg
     1141 gcggtcgtgt ttgcgctcgc gggcggacac ggcgcgaacc tcacgtgggt ggccgggcga
     1201 cacgtgctcg tcggtggcat cttcggagcg ctcgccgtcg ctctgcacgt gcgccgccgc
     1261 gagcgagcgt cggcgggcgc tttgccggcc tggatcgcgc cgctcgcgtt gctttgctcg
     1321 atgctagcca gcgagacgag cctggcggcc gcgtcgatca tcgcggccta cgagctcttc
     1381 ggcacggacg cgaagccgcg gcagcgagcg ctcgcggcgg cgccctggct cgcggccatg
     1441 ctcgtttacg tggccctcta ctcgattgcc ggcttcggtg tgcgaaagag cttgctctac
     1501 atttcgccgg cgttcgctcc gttggcgttc ttgcaggcgg cgctcacgcg tgcgcccatg
     1561 ttggcgggtg agttgagctt tgccgtgccg gcgggcgtct ggggagcggg ggcttcggcg
     1621 cggccgctct tcgcggtcat cggtatcgcc gctacggcgc tcgtgttcgg gctcgcttgg
     1681 cgcggcgccg cgagccaagc cgaacggcgt cgcgtgcgct ggctagcggt gagcgcgctc
     1741 gtcagcgtgc tgccgatggt gggaggcgtt cccgacgggc gcgtgctcct gcttcccatg
     1801 ctcgcgtcgg caccgctcgt cgcgctggcc atcgatgccg cgttcttcaa cccggcggag
     1861 tctcggcgca aactcgcgcg cgcggggggc gcggcgctcg ttttcatgca cctggtcgtc
     1921 gctccgctcg tgcgcctcgg cacgacggag ctcatggtca gcgtcgggcg caagcaacgg
     1981 acgctcgccg agagtgccga tttctcgcag tgcgcgccgg gctcgccgct cttcctggtc
     2041 acgggcgccg atcccgcgct gtgcctctcg ggcggcacct cgctccgtta ctaccggccg
     2101 gagctcccgg cgcgccatcc gagcttcgcc gtgctttcac tcgcgcccca cgatctcgag
     2161 ctcgaacggc cgagcgaacg cgagctcgtc ctcagcgtcg acgccaaacg gcgctacccc
     2221 acgctgttcg agaccttgtt tcgcgacact ccgctcgtgg cgggtcagag cgtccgcttc
     2281 gagcactttg ccgcccgtgt gctcgccgtc gaggacggcg tcttcatgcg cgcggctttc
     2341 gagctgccgt cgaacgcgtg cctcctgacg ctcgagcgtc aaaagctcgt cgggcgccct
     2401 gagcccaccg tcggcgccaa gctgcacgtc gtgcacgagc cggggccgct cggactctga
     2461 gcggcacgca ggcacgaagc agtcgatcag cgcgcgtcga ccgcgacggt cagcttgcgc
     2521 gccgcgcgac agcagcgttc actgcgatcg acgccgactg catccaagcc gaaggcattg
     2581 gctacggcga gcgcggtccc ttggccgcag aagggatcga cgatcgtccg aacgttcgtc
     2641 tccgcgagcg cgaagcgaac ggcgagcgcg cacgcctcga cccccattgc cttgggtgac
     2701 ggctcgaagc ccgggtctgg caaaacgtcc ggcagcaggt ggcggaacgc cgggcgcgcc
     2761 tcgcgcgcga aacacaaaag gtgcgaatag cccggtcgcc cggggctcag cgagccgggt
     2821 gccgtccggc agacgatctt gtgccacacg agctgatgcc cgctcgcctg cgcggccgag
     2881 agcacgagaa agctcttatc tatccacacg ccgcgaacga ggacgtccgt ttgaaaaaac
     2941 atcgcgacgc cgtcgtc
//
LOCUS       DATIML010000972         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5695715, whole genome shotgun sequence.
ACCESSION   DATIML010000972 DATIML010000000
VERSION     DATIML010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5695715"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /locus_tag="VLJ38_16820"
     CDS             complement(<1..1072)
                     /locus_tag="VLJ38_16820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41243.1"
                     /translation="MQTNTPVDGSVSRAGSWLKHLSDTEVLAGTRRLVGRSNQLLAEL
                     LVHLGEVEARGIHRTRACSSLYVYCIYELRFSEDEAFRRVAAARLVRRFPALLDALGS
                     GELHLTGLLMLAPHLTEGNFVEVLARAKHRTKRELARLVRILDPLPAVPARIEPLGPP
                     PARLVPPEPTWQEFIASTCQVRELAPGDRPREWVESANDSGASSRERGPKTASASATV
                     AAAEREIVPKTVVAQEPMTALATSKAPELEDRTTVAAERDHGATLEHPERYKVQFTAT
                     EEYVRLVEAAKALLSHAVPNVTLEELQLRAMRALVTELKKKKYAALDSSPVRTRQPET
                     ADAPSPAASTTWRERTDALEQGA"
BASE COUNT          260 a          498 c          533 g          288 t
ORIGIN      
        1 gggcaccttg ttcgagcgcg tccgtgcgtt cgcgccacgt cgtcgaagcg gccggcgacg
       61 gggcgtcagc agtttcgggc tggcgtgtcc gtacgggcga gctgtcgaga gcggcgtact
      121 tcttcttttt gagctccgtg acgagcgcac gcatcgcgcg cagctgaagc tcctccagcg
      181 tcacgttcgg aacggcgtgt gaaagcagtg ccttcgctgc ttcgaccaag cggacatact
      241 cctcggtcgc ggtaaattgg accttgtagc gctcggggtg ttccaaggtg gcgccgtggt
      301 cacgttcggc ggcaacggtc gtccgatcct ccagctctgg cgctttactc gtcgcaagcg
      361 ctgtcatcgg ttcctgcgcg acgaccgtct tcggcactat ctcccgctcc gccgcggcaa
      421 cggtggcact cgcgctcgcg gtttttgggc cccgctcgcg cgaactcgcg cccgaatcat
      481 tcgcgctctc gacccattcg cgaggtcgat cgcccggcgc gagctctcgg acctggcatg
      541 tcgacgcaat gaactcttgc caggtgggct cgggcggcac gagccgcgcc ggcggtggcc
      601 caagaggctc gatgcgagca ggaacggcgg gtagcggatc gaggatccgc acgagtctcg
      661 cgagttcgcg cttggtccgg tgtttggcac gcgcgaggac ctcgacgaaa ttaccctccg
      721 taaggtgcgg cgcaagcatg agcagaccgg tgaggtggag ctcgcctgag cccaaagcgt
      781 cgagcagcgc agggaagcgc ctgacgagac gagcggcggc aactcgacga aatgcctcgt
      841 cctcggagaa gcggagctcg taaatgcaat aaacgtaaag gctcgagcag gcgcgcgtgc
      901 ggtgaatacc gcgtgcttcg acttcgccga ggtggacgag gagctcggcg agcagttgat
      961 tcgagcgacc cacgagtcgg cgggttcccg cgaggacctc cgtgtcggag aggtgcttga
     1021 gccaagagcc ggcacgggaa acggatccat cgacaggcgt gttcgtctgc atgcatcgca
     1081 tgttaaaccc agcttatcgg cgctctccaa aggcgctctc gcgagcgatg gagcaccgaa
     1141 acgggacgcg aatcgtagag tgagcaagag ctcagcagca cgcccgccgc gtgcggcgca
     1201 cgctacattt tcgggtcatc ggcaagctcg cggacgcgag tgtgacgaat tctgtcaagg
     1261 caaatcgcga gcacgacgag ctctcgagcg gtggcgagcg gaatcgaagt ctggcgcgac
     1321 gcgccgcgta ggtgcctgct ggaagctgtc gcacgtgccg cgcagcggcg cccgaacccc
     1381 cgagacgctc tcgaatcgtg tcgttacgaa tcagcgagcg tcctcactcc cgccggcgct
     1441 tcagcgtacc cttgtcgtcg aattccgccg cgacgtcggg atcgaccgga gcgctcttct
     1501 ccgtggcggg cgcgtcttcc gtctcgtcgc cgtcgtcctc ttcgtcgtcc tcttcgtcgt
     1561 ggtcgtggtc gtggtcgtg
//
LOCUS       DATIML010000973         3406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4831866, whole genome shotgun sequence.
ACCESSION   DATIML010000973 DATIML010000000
VERSION     DATIML010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3406
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4831866"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..1306
                     /locus_tag="VLJ38_16825"
     CDS             263..1306
                     /locus_tag="VLJ38_16825"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HSU41244.1"
                     /translation="MFAPRFTISHRITAGLTLIERARGFLEAARLSDAWLDRMSQAAL
                     LAEAYATTHMEGTELTRLQAEALWAGGSAAGVREDDVRELLNYRDAFNVVAEHVAAGT
                     RLSEELICAVHARLVTGVRGETGQPGAYRSVQNYIARTATLEVVYMPPAPHEVPALMR
                     ELVAWLETGSEVHAVLVAGIAQFQLVQIHPFVDGNGRTSRLLSTLCLYRAGYDFKRLF
                     TLSEYYDRDRSRFYRALQQVRELDLDLTSWLEFFVEGLATQLAEVRTKGERVIRRDVI
                     AQEHGLSQRQALAVEHLLAEPELRIEDFEALCPEVNRRTLQRDLEDLVARRVLKMSGA
                     ARAVRYRLGIKGL"
     gene            complement(1345..3282)
                     /locus_tag="VLJ38_16830"
     CDS             complement(1345..3282)
                     /locus_tag="VLJ38_16830"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSU41245.1"
                     /translation="MSPASLPVDDVTEWLEADGLGGFASGTTSGVRTRRYHALLLVAA
                     APPADRRVLVQGFVARLVTDEGSVELWPQAYVGGFTTGAEAEYVEFEREPWPSWRITT
                     RLGVVRVELFVPHAEAAVVVTFALERPLPGARLLLRPLLSGRDFHALQHEGDGFRWQA
                     ETRGAALCFEPYPGVPAVLSLANAEYRHAPDWYRNFYYSAEDARGLDATEDLASPGEL
                     TFDFARGEARWVLAADLPGRRAFEYEEVTALVERLRATERTRRHAFASPLERSGDAYV
                     VARGPGRTIIAGYPWFGDWGRDTFIALRGLCLARHDYETARSILCEWAAVVSNGMLPN
                     RFPDEADAPVEYNSVDASLWFVLAADELLAAPGARGVLSSAERGRLETAIVAIVAGYA
                     RGTRYGIQRTADGLLAAGVAGSQLTWMDSKIGDWVVTPRSGKPVEIQALWVHALWIAA
                     HFDPRFVSFTRTARAALEERFWNPGRDMLFDVVDEDHVAGAVSAACRPNQIFAAGGLP
                     RTLLSPERARAVVDAVERELWTPLGLRSLERGHPAYVPHYRGGVRERDGAYHQGAVWP
                     WLMGPFVEAWVKCRNGTAAAKAEARARFLAPLYAHLEQAGLGHVSEVADGDPPHTPGG
                     CPFQAWSLSELIRLERQILVP"
BASE COUNT          610 a         1180 c         1126 g          490 t
ORIGIN      
        1 gcctgaacac ggctcgccgc cgaaatcacc gcagcgcacg aaatgacacc aaacgaccag
       61 caaagccggg ccatgcatga cctccgctag agacgggggc acgataggcg cccgtcgcgc
      121 agcctcggtg ccagctccga aaactcttcg cggcgcgtgc ggcgccgagc gtgacaaccc
      181 acccatccgt cacacctgct tcctcgaagc gccaaaacgg gacgattcgt cgcaacgagg
      241 cggcgcgtga taaaatcgtc caatgttcgc gccgcgcttc acgatcagtc accgcatcac
      301 ggcgggcctg acgctgattg agcgggcgcg cgggtttctc gaagccgctc gactttccga
      361 cgcctggctc gaccgcatga gccaagcagc cttgctcgcg gaagcgtacg cgaccacgca
      421 catggaaggc acggagctca cgcgcctaca agccgaggcg ctgtgggccg gcggtagcgc
      481 agccggcgtc cgcgaagacg acgtgcgcga gctcttgaac taccgggacg cgttcaacgt
      541 cgtggccgag cacgtcgcgg cgggcacgcg gctcagcgaa gagctgattt gtgcggtcca
      601 cgcgcgactc gtcacgggcg tgcgcggcga aaccgggcag ccgggagcgt atcggagcgt
      661 gcagaattac atcgcgcgca cggcgacgct cgaagtcgtc tacatgccgc cagcaccgca
      721 cgaggtgccg gcgctcatgc gcgagctcgt cgcgtggctc gagacgggta gcgaggtgca
      781 cgcggtactc gtggccggta tcgcgcaatt tcagctcgtg caaatccatc ccttcgtcga
      841 cggcaacggg cgtacgtcgc gcttgctttc gacgctgtgc ctctatcgtg caggctacga
      901 tttcaagcgc ctcttcacgc tgagcgagta ttacgaccgc gatcgctcgc gtttctatcg
      961 agcgctccaa caggtgcgcg agctcgacct cgatttgacg agctggctcg agttcttcgt
     1021 cgaaggcctc gccactcaac ttgccgaagt gcgcacgaag ggcgaacgcg tgattcgtcg
     1081 cgacgtgatc gcgcaggagc acggcctgag ccagcgccaa gcgctcgccg tcgagcactt
     1141 gctcgccgag cccgagcttc gcatcgagga cttcgaagcg ctctgcccgg aagtgaaccg
     1201 ccgtaccctg cagcgcgatc tcgaggatct ggtcgcgcga cgcgtgctca agatgagcgg
     1261 cgccgcgcgc gcggtccgat atcgtttggg aatcaagggg ttatgagaca atcgcgacac
     1321 gatcgcgaca cgaatcgcga cacgtcacgg gactaggatc tgccgttcga gccgaatcag
     1381 ctcggatagc gaccaggcct ggaacggaca gccacccggc gtgtgcggcg gatccccgtc
     1441 ggcgacttcg ctcacgtgac cgagcccggc ttgctcgagg tgcgcgtaga gcggcgcgag
     1501 gaagcgagca cgcgcttcgg ctttggcggc ggcggtgccg ttccgacact tcacccacgc
     1561 ttcgacgaag ggtcccatga gccagggcca caccgcgccc tgatggtagg cgccgtcgcg
     1621 ctcgcgcacg cccccgcgat aatgcggcac gtaggccggg tgaccgcgct cgagcgagcg
     1681 cagaccgagc ggcgtccaga gctcgcgctc caccgcatcg acgacggcgc gagcccgctc
     1741 gggcgagagc aaggtgcgcg gcaggccgcc cgcggcgaag atttgattgg gacggcaggc
     1801 agcagagacc gcacccgcga cgtgatcctc gtccaccacg tcgaagagca tgtctcggcc
     1861 ggggttccaa aagcgctcct cgagcgccgc gcgcgcggtg cgtgtgaagc tcacgaagcg
     1921 cgggtcgaaa tgtgccgcta tccagagcgc gtgcacccaa agcgcctgga tttctacggg
     1981 ttttccgctg cgtggcgtca cgacccagtc accgattttc gaatccatcc acgtgagctg
     2041 cgagccggcg acgcctgcgg cgagcagccc gtcggccgtg cgctggatcc cgtaacgcgt
     2101 gccccgcgcg tagccggcca cgatcgcgac gatcgccgtt tcgaggcgcc cgcgctcggc
     2161 gctcgagagc acaccgcgtg cacctggcgc agcgaggagc tcgtcggccg cgagcacgaa
     2221 ccagagcgaa gcgtcgacgg agttgtactc gacgggcgcg tccgcctcgt cgggaaagcg
     2281 attcgggagc atgccgttcg agacgacggc cgcccattcg cagaggatgg agcgcgccgt
     2341 ttcgtagtcg tgacgcgcga gacacaagcc gcgcagagcg atgaacgtat cgcgccccca
     2401 atcgccgaac cacggatacc ccgcgatgat ggtgcgtccg ggcccgcgcg ccacgacgta
     2461 ggcgtcgccg ctccgctcga gtggactcgc gaacgcgtgg cgccgcgtgc gctcggtggc
     2521 acgcaagcgc tcgacgagcg ccgtcacctc ctcgtactcg aacgctcggc gacccggcag
     2581 atccgcggcg agcacccacc gtgcctcccc gcgcgcgaag tcgaacgtca gctcgccggg
     2641 cgacgcgaga tcctccgtcg catcgagccc gcgcgcgtct tcagcggagt agtagaagtt
     2701 cctgtaccaa tcgggggcgt gccggtactc ggcgttggcg agcgacaaca ccgccggaac
     2761 gcccggatac ggctcgaagc agagagcggc gcctcgcgtc tcggcctgcc aacgaaagcc
     2821 gtcgccttcg tgctgcaacg cgtggaagtc acggcccgaa agcaatggac gcagcaagag
     2881 ccgcgcgccc ggcaacggcc gctcgagcgc aaacgtgacg acgaccgccg cctcggcatg
     2941 cggcacgaac agctccacac gcaccacgcc gagccgcgtc gtgatgcgcc agctgggcca
     3001 aggctcgcgc tcgaactcga cgtattcggc ttccgcgccc gtcgtgaagc ccccgacgta
     3061 cgcctgcggc cagagctcga ccgaaccctc gtccgtcacg agccgcgcga cgaagccctg
     3121 cacgagcaca cgccgatcgg ctggcggagc cgccgccacg agcaagagcg cgtggtaacg
     3181 ccgtgtgcgc acgcccgatg tggttccgct ggcgaagcca ccaagcccgt cggcttctag
     3241 ccactcagtg acgtcgtcga caggtagcga agcggggctc acgctgcttg ctcccgcccc
     3301 aggcgaccct tggcgagcga ctcgaggcag cgtgcaacaa gggcggtcca gccggtttga
     3361 tggctggcac cgatgccggc accgttatcg ccgtgaaaat attcgt
//
LOCUS       DATIML010000974         6854 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1366352, whole genome shotgun sequence.
ACCESSION   DATIML010000974 DATIML010000000
VERSION     DATIML010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6854
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1366352"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VLJ38_16835"
     CDS             complement(<1..469)
                     /locus_tag="VLJ38_16835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41246.1"
                     /translation="MKLNRAHALLLVGTLAAGACVTETSDDDSGGRSGSGGKAGKGGS
                     AGKGAAGSSSAGKGSGGTSGAGAEPGGRGGMSEAGAPSEGGMAGSVVEGGGEGGSVAE
                     GGAPSASGAGGEGGAECNDSLASELTCADLDTSGCGIKDVLDAECDMTWKNMKP"
     gene            complement(566..1972)
                     /locus_tag="VLJ38_16840"
     CDS             complement(566..1972)
                     /locus_tag="VLJ38_16840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HSU41247.1"
                     /translation="MTLPFKKLLVANRGEIACRVLRTAERLGVPTVAVFSDADVALPH
                     VALADEAIRLGPGPVKESYLSVPALLAALRDTGADAVHPGYGLLSENAEFAEAVTAAG
                     AVFVGPSPDAMRLVGDKIRARKSASAAGLEPPPGSDGPVDPNDAERLRAEAERVGFPV
                     LVKAAGGGGGIGMQIARDAAELERAAKTCSERGRAAFLDARVYLERYLERPRHIELQV
                     LRDAHGCALILGERECSVQRRYQKVIEESPSPAAFLAGGAGDAKRAELARHALRLLAD
                     VGYTGAGTIELVANAQGDFYFLEVNARIQVEHPVTELVTGVDLVEQQLRIAAGERLAD
                     GLGAARHGHAVEARLYAENPAAGFVPQPGKLVRFRLPVGMPGVRIDAGYVEGNEITPF
                     YDPLIAKIIGYGATRDEAIERLDGALAALEIELTGARGPRETNRSFLRSVLASSEFRA
                     GEYDTSLAERLAKPNKTG"
     gene            complement(1969..3114)
                     /gene="rlmN"
                     /locus_tag="VLJ38_16845"
     CDS             complement(1969..3114)
                     /gene="rlmN"
                     /locus_tag="VLJ38_16845"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HSU41248.1"
                     /translation="MSEVRPIGRFPEEWAEELAALGEPKYRAQQIFRWIHRRGELDAA
                     KMTDLPVALRERLTGAGVVAPLEVVDVHRAKDGTRKLVLGMQGGGRIECVLIPMTPLS
                     GDADLAAAADDDDDTLENAPAERTRVTLCVSTQFGCAMGCVFCASGRAGLGRGLGADE
                     IVSQVILARRQLDENEDLTNLVFMGMGEPLHHYDETARALRLLTHPEGTGMSPRRITV
                     STVGLVPGLKRLGSDFAGKVGLAVSLHAPDDATRSRIVPMNKRYPLNELIAALKSYPL
                     PRRRRITIEYTLIDGVNDSDEHADRLVRVLAGLPVKVNLIPMNPVAGADFRASPPERV
                     DAFQARVAGYGLSCFVRARRGDEVSAACGQLALEPGLIELGRARVPA"
     gene            complement(3111..3956)
                     /gene="mazG"
                     /locus_tag="VLJ38_16850"
     CDS             complement(3111..3956)
                     /gene="mazG"
                     /locus_tag="VLJ38_16850"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HSU41249.1"
                     /translation="MGRPFPIPESPPLAEQQGASYPSLVALMRRLLGEDGCPWDKEQD
                     FASIRRYVLEEACEVIDAIDAKDFDGLREELGDLALQVVFLGELARREGLFGPDDVVR
                     GIVEKLVRRHPHVFSDTTVEGSDEVLKNWERIKAEEKRDRGVLDGVPRSMPALQRAQR
                     MSEKVSRVGFDWPDGRGSRQKVNEELGELDHAIESGDKTRMEAELGDVLFALVNLARH
                     HGLDAETALRGTGDRFARRFAHVERRVKERHGGFSRGADGKPLPGPPLEVLDRYWDEA
                     KAEER"
     gene            4033..4812
                     /locus_tag="VLJ38_16855"
     CDS             4033..4812
                     /locus_tag="VLJ38_16855"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSU41250.1"
                     /translation="MAVLLEERRGAVAILSLNRPAALNALDAELVGALSRVLESAVGD
                     PGVRSIVLTGAGGAFCSGADLKEALRDLDAGVALGERLAAFQKNVRLIVSCDKPVIAA
                     VDGAAVGFGADLALACDLRVLSDRAYLQEKFVGIGLMPDGGGTFHLARLVGLGRALEL
                     LLLGERIEAARALELGLALRVVPAPQLLAEALALAERLADGPPLALAAIKHATRRSLE
                     GTLDDALTREATGQTALLQSADLREGVVAWTERRKPRFTGR"
     gene            complement(4830..6389)
                     /locus_tag="VLJ38_16860"
     CDS             complement(4830..6389)
                     /locus_tag="VLJ38_16860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41251.1"
                     /translation="MAKKISGTHWLASATLVGVVYACSSTAEVTTRPHGLTGGDAGST
                     GTGGTSNGRGGSGASSATGGSITIGTGGSSASGGKAGSSGFGGAPEGGQSEAGFGNDF
                     SAAGLPDITFTYDPESGGQGGACAAETGVAMLRKRPMDVIVAIDNSESMAGEIKQVQA
                     RINEDFAAILDKSEIDYRVILVSRYGNVFVHYQDHGSASDSAYAVCIGAPLSTLTCPA
                     SATDATPAVANNPPKFYHHSTDIGSNDLWCRLMDAYHASDPYPNARTNWVPVAPNGWS
                     AFVRPNAYKVFVGITDDSPTRTAGTGCSSLLSGNDEQAWANQFDTALRALDPAQFQTA
                     SGDRNYVWYSIVGFAGNATTNPTPLTPNDPVETRCCRGNGTAQSACPGTTQAPAEDSA
                     EPGLGYQYLSILTGGLRYPSCYNSNFNDIFNKIAEGVVEQAQVSCEYDVPKPSHGIVD
                     FNQTRVAYQPGSGASVPLARHPSAADCGSNAGFYFSSDFAKIELCPTTCSAVEGDPSV
                     KVSIDFGCLGS"
     gene            complement(6390..>6854)
                     /locus_tag="VLJ38_16865"
     CDS             complement(6390..>6854)
                     /locus_tag="VLJ38_16865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41252.1"
                     /translation="GAPGSEAARSLLSQIAYEGGTAATPDCDHSGSVPDQGDCHFDMT
                     TSQDFAKDLNAALQKISHDKVLSCEFDVPTNPDGGGVDRSKVNVTFKPGSGKEETIKL
                     DDTASCDQANGWQYSEDGSKIELCGAACDRVESDPDAEVRIALGCPTIKVVR"
BASE COUNT         1014 a         2353 c         2317 g         1170 t
ORIGIN      
        1 tcggcttcat gtttttccag gtcatgtcgc actccgcatc gaggacgtcc ttgatgccgc
       61 agcctgacgt atccaaatcg gcgcacgtga gctcgctcgc gaggctgtcg ttgcactccg
      121 cgccgccttc accgccggcg ccggacgcgg acggggcccc gccctcggca acgctgcccc
      181 cttcacctcc gccttcgacc acgctgcccg ccatgccacc ttcactcggc gcaccggcct
      241 cgctcatccc gccacgacct ccgggctctg cgcccgcgcc gctcgtgccg ccgctgccct
      301 tgccagcgct gctcgagcct gcggcgcctt tgccggccga gcctcccttg ccggctttcc
      361 cgccggagcc gctccgcccg ccactgtcgt cgtcgctggt ttcagtgaca caggcccccg
      421 ctgcgagtgt cccgaccaaa agcaaagcat gggcacgatt gagcttcatc cgtggttctc
      481 cgtcgccaag attgctctcg aaagcaacga gagcgccacg gactctatac ggaccggacg
      541 cgtcgaagct acccgtcgga ctcgactagc cagtcttatt tggcttcgcg aggcgctcgg
      601 cgagcgaggt gtcgtactcg ccggctcgaa attccgatga cgcgagcacg ctgcgcaaga
      661 acgagcgatt cgtttcgcgc gggccgcgcg cccccgtgag ctcgatttcg agcgcggcca
      721 gggcgccgtc gaggcgttcg atcgcttcgt cgcgcgtcgc gccgtaaccg atgattttgg
      781 cgatgagtgg gtcgtagaag ggcgtgattt cattgccttc gacgtaaccc gcgtcgatgc
      841 gcacgccggg catgcctacg ggcaggcgaa agcgcacgag cttgcccggc tgcggcacga
      901 agcccgccgc gggattttcg gcgtacagac gcgcctcgac ggcgtgaccg tggcgcgcgg
      961 cgccgaggcc gtccgcgagt cgttcacccg cggcgatgcg gagctgctgc tcgacgagat
     1021 cgacgccagt gacgagctcc gtcaccgggt gctccacttg aatgcgcgcg ttcacttcga
     1081 gaaagtaaaa gtcgccctgc gcgttcgcga cgagctcgat ggtgcccgcg cccgtgtagc
     1141 ccacgtccgc gagcagacgg agggcgtgcc gcgcgagctc ggcgcgtttg gcgtcgcctg
     1201 cgccgcccgc gagaaacgcg gcgggcgacg ggctctcttc gatgaccttt tggtagcggc
     1261 gctgcacgct gcattcccgc tcgcccaaga tgagcgcgca accgtgggcg tcacgcagca
     1321 cctggagctc gatgtgccgg ggccgctcga gatagcgctc gaggtacacg cgcgcatcga
     1381 gaaaggccgc gcggccgcgt tcggagcaag tcttcgccgc gcgttcgagc tccgcggcgt
     1441 cgcgagcgat ctgcatgccg ataccgccgc cgccacccgc ggctttgacg agcacgggaa
     1501 atccgacgcg ctcggcttcc gcacgcagcc gctcggcgtc gttcggatcc acggggccgt
     1561 cgctgccggg tggcggttcg agcccggccg cggacgcgct cttgcgcgcg cggatcttgt
     1621 cccccacgag gcgcatggcg tccggcgacg ggccgacgaa cacggcgccg gcggccgtga
     1681 ccgcctcggc aaactcggcg ttttcgctga gcaggccgta ccccgggtgc acggcgtccg
     1741 cgccagtatc gcggagcgcg gcgagcagcg ccggcacgct cagataactc tccttcacgg
     1801 gcccgggacc gagacgaatc gcttcgtccg cgagcgccac gtgcggcagc gcgacgtccg
     1861 catcggagaa cactgcgacg gtgggcactc cgagtcgctc ggcggtccgg agcacgcggc
     1921 atgcgatttc gccgcggttg gcgacgagca gcttcttgaa cggcaaggtc atgcgggcac
     1981 gcgagcgcga ccgagctcga tcagcccggg ctcgagcgcg agctgaccgc acgccgccga
     2041 cacttcgtcg ccgcggcgag cgcgcacgaa gcacgacaag ccgtaacctg cgacgcgcgc
     2101 ctggaaggcg tcgacgcgct cgggcggcga agcacgaaag tccgcgcccg caacggggtt
     2161 catcgggatc aggttcactt tgacgggcaa gcccgcgagc acccgcacga gacgatcggc
     2221 gtgctcgtcg ctgtcgttca caccgtcaat cagtgtgtat tcgatggtga tgcggcggcg
     2281 tcgcggcagc gggtaactct tgagcgccgc gatgagctcg ttcaagggat agcgcttgtt
     2341 catgggcacg atgcgtgatc gcgtcgcgtc gtccggtgcg tgcagcgaca cggcgagccc
     2401 gactttaccg gcgaaatcgg agccgagtcg cttcaagccg ggcacgaggc ccaccgtgga
     2461 aaccgtgatg cggcgcgggc tcatgcccgt gccttccggg tgcgtcagca ggcgtagcgc
     2521 gcgcgccgtc tcgtcataat gatggagcgg ctcacccatg cccatgaaga cgaggttcgt
     2581 gagatcctcg ttttcgtcga gctggcggcg cgccaggatc acttggctca cgatttcgtc
     2641 cgcgccgagg ccgcggccga ggccggcgcg accgctcgcg cagaagacgc agcccatggc
     2701 gcagccgaac tgcgtcgaaa cgcaaagcgt cacgcgcgtg cgttcggccg gcgcgttctc
     2761 caacgtgtcg tcgtcgtcgt ccgcggcggc cgcgagatcg gcatcgccgg agagcggcgt
     2821 catcgggatg agcacgcatt cgatgcgtcc gccgccctgc attccgagca cgagcttgcg
     2881 cgtgccgtcc ttggcgcggt gcacgtcgac gacctcgagc ggcgctacga cgccagcgcc
     2941 cgtgagacgc tcgcgcaagg cgacgggcaa gtccgtcatc ttcgcggcgt cgagctcgcc
     3001 gcgccgatga atccaccgaa aaatctgctg ggcgcggtac ttcggctcgc cgagcgcggc
     3061 gagctcctct gcccattctt ccgggaatcg cccgatggga cgcacctcgc tcatcgttcc
     3121 tcggctttcg cttcgtccca gtagcggtcg agcacctcga gcggcggccc gggcagcggc
     3181 ttgccgtcgg cgccgcgcga gaagccgccg tggcgctcct tgacgcgccg ctcgacgtgc
     3241 gcgaatcggc gcgcgaagcg gtcgcccgtg ccgcgcaagg ccgtttcggc gtcgaggccg
     3301 tggtggcgcg cgagattgac gagcgcgaag agcacgtcgc ctagctccgc ttccatgcgc
     3361 gtcttgtcgc cggactcgat cgcgtggtcg agctcgccga gctcctcgtt cactttttgg
     3421 cgcgagccgc gcccgtccgg ccaatcgaag ccgacccgac tcaccttctc gctcatgcgc
     3481 tgcgcgcgct gcaaggccgg catggagcgc ggcacgccgt cgagcacgcc gcggtcgcgc
     3541 ttctcttccg ccttgatgcg ctcccaattc ttgagcacct cgtccgagcc ttcgaccgtg
     3601 gtgtcggaaa agacgtgcgg gtggcgacgt acgagctttt cgacgatgcc gcgcacgacg
     3661 tcatcaggac cgaacagacc ctcgcgccgc gcgagctcgc ccaagaacac gacctggagc
     3721 gccaagtcgc cgagctcttc ccgcaagccg tcgaagtcct tggcgtcgat ggcgtcgatc
     3781 acttcgcacg cctcctcgag cacgtagcgc cggatcgagg cgaaatcctg ctccttgtcc
     3841 caggggcagc cgtcctcgcc gaggaggcgg cgcatgaggg cgacgagcga ggggtaggag
     3901 gcgccctgtt gttcggcgag cggcggcgac tcggggattg gaaaggggcg acccatggcg
     3961 cccggttcgt agcaccagag tggcgagggc ggcaggttcg gcgacgaaga agcgtgatac
     4021 gcttttgcga ggatggcggt gcttctcgaa gaacggcgcg gggcggtggc gatcctctcc
     4081 ctgaatcgtc cggcggccct gaacgcactc gacgccgagc tcgtgggcgc gctttcccgc
     4141 gtgctcgaaa gcgccgtggg cgatcccggg gtgcgcagca tcgtgctcac gggcgcgggc
     4201 ggcgcgtttt gttcgggtgc cgacctgaaa gaggcgctgc gcgacctcga cgccggtgtc
     4261 gcgctcggcg agcgcctcgc cgcctttcag aaaaacgtgc gcctcatcgt gagctgcgac
     4321 aaacccgtga ttgcggcggt cgacggagcg gccgtcgggt tcggcgccga tctcgccctc
     4381 gcctgcgacc tgcgcgtcct gtcagaccgc gcttacttgc aggaaaagtt cgtcggcatc
     4441 ggcttgatgc cggacggcgg cggcacgttc cacctcgcgc gcttggtcgg actcgggcgg
     4501 gcactcgagc tcttgctgct cggcgagcgc atcgaagcag cgcgcgccct cgagctcggc
     4561 ctcgcgctcc gcgtcgtccc ggcaccgcaa ctcctggcgg aggcgctcgc tctcgccgaa
     4621 cgcctcgccg acggtccgcc gctcgcgctc gccgccatca agcacgccac gcggagaagc
     4681 ctcgaaggca cgctcgacga cgccctcacc cgcgaggcca ccggacagac cgcgctgctc
     4741 caaagcgccg acctgcgcga aggtgtcgtc gcgtggacgg agcgccgcaa accgcgtttc
     4801 acgggccgct gacgcccgcg tgccactgat tacgagccga gacagccgaa gtcgatcgac
     4861 accttgacgc tcgggtcacc ctcgaccgcg ctgcacgtcg tcggacacag ctcgatcttc
     4921 gcaaagtccg agctgaagta aaagcccgcg ttcgagccgc agtcggccgc actcggatga
     4981 cgcgcgagcg gcacgcttgc tccgctaccg ggctggtagg cgacacgcgt ctgattgaaa
     5041 tcgacgatgc cgtgcgaggg cttgggcacg tcgtactcgc acgacacttg cgcctgctcc
     5101 accacgcctt cggcgatctt gttgaagatg tcgttgaagt tcgagttgta gcaagacggg
     5161 tagcgcagac cgcccgtgag gatactgagg tactgatagc cgaggccggg ctcggcgctg
     5221 tcttcggccg gtgcttgggt cgtgcctgga catgcgcttt gcgccgtacc gttgccgcgg
     5281 cagcagcgcg tctccacggg atcattgggg gtgagcggcg tcggattggt cgtcgcgttg
     5341 cccgcgaaac cgacgatgct gtaccagacg tagttgcgat cgccgctcgc ggtttgaaac
     5401 tgcgcagggt cgagcgcgcg cagtgcggta tcgaattggt tcgcccaggc ttgctcgtcg
     5461 ttgccggaga gcagcgagga gcagcccgta ccggccgtgc gcgtcgggct gtcgtcggtg
     5521 atgccgacga agactttgta cgcgttcgga cgcacgaacg cgctccagcc gttcggcgcg
     5581 acgggcaccc agttcgtgcg cgcgttcggg tacggatcgc tcgcgtggta ggcgtccatc
     5641 agccggcacc aaaggtcgtt gctgccgatg tcggtgctgt gatgatagaa tttaggcggg
     5701 ttattggcga cggcaggcgt ggcgtcggtc gcgctcgcgg ggcacgtcag cgtgctgagg
     5761 ggcgccccga tgcagacggc gtaagcggag tcggaggcgc taccgtgatc ttggtagtgg
     5821 acgaagacgt tgccgtagcg cgagaccagg atcacccgat agtcaatctc gctcttatct
     5881 agaatggccg cgaagtcctc gttgatgcgg gcctgcacct gcttaatttc ccctgccatg
     5941 ctctcggagt tgtcgatcgc cacgatgacg tccatcggac gcttgcgcag catcgccacg
     6001 ccggtctcgg ccgcgcaggc gccgccttgt ccgccgcttt cggggtcgta ggtgaacgtg
     6061 atgtcgggca agccggccgc actaaaatcg ttaccgaacc cggcctcact ctgtccgcct
     6121 tcgggcgcgc caccgaagcc gctactgccc gctttgccgc cgctcgcgct agagccgccg
     6181 gtcccgatgg tgattgagcc gcccgtggcg ctcgaggcgc cgctgccgcc tcgaccgttc
     6241 gaggtaccgc cggtgccggt gctgcccgcg tcgccgccgg tgagtccgtg cggccgcgta
     6301 gtgacctcgg ccgtgctcga gcacgcgtac accacgccga ccagcgttgc gctcgcgagc
     6361 caatgcgtgc cgctgatttt tttggccatt taccgcacca ccttgatcgt cgggcagccg
     6421 agcgcgatgc gaacttcagc gtccggatcg gactcgacgc gatcgcaggc cgcgccgcaa
     6481 agctcgattt tgctgccgtc ttcgctgtat tgccagccgt tagcctgatc gcaactcgcc
     6541 gtgtcgtcga gcttgatcgt ctcctctttc ccgctgccag gcttgaacgt gacgttgacc
     6601 ttcgagcgat ccacgccgcc gccgtcggga ttggtgggca cgtcgaactc gcacgagagc
     6661 accttgtcgt ggctgatctt ttgcagcgcc gcgttcagat ccttcgcgaa gtcctggctg
     6721 gtcgtcatgt cgaagtggca gtcgccctgg tcggggacac tgccggagtg atcgcaatcg
     6781 ggagtcgcgg cagtgccgcc ttcgtaggcg atctgggaga ggagcgagcg cgccgcttcg
     6841 ctgccgggcg cgcc
//
LOCUS       DATIML010000975         6703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4249692, whole genome shotgun sequence.
ACCESSION   DATIML010000975 DATIML010000000
VERSION     DATIML010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6703
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4249692"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..951)
                     /locus_tag="VLJ38_16870"
     CDS             complement(142..951)
                     /locus_tag="VLJ38_16870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41253.1"
                     /translation="MLAATSAACEPELKVGTWPCTSSSGPAGTMPDGSVVSIKDPVPM
                     PWQNGFEDGFCGYARAKGYCYKDPDASYAVVDAPVHSGLHAAEFSVTGDDALNGKQTR
                     CVREGAMPPDAVYGAWFFLSSTATAGANWNLMYFNGGTADGLNGLPGRGAEWDVSIAD
                     GDGGPHTLYLRNHLTGKTIPDPADADAGVPPSISAGEWFHVEVRLARDQGMAGRITLY
                     QDGQPIVDVKGIQTELTGVTWGQWYVGNLVGAVTPPDSTLYVDDVSIAPPP"
     gene            1112..2689
                     /locus_tag="VLJ38_16875"
     CDS             1112..2689
                     /locus_tag="VLJ38_16875"
                     /inference="COORDINATES: protein motif:HMM:NF027814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 27 protein"
                     /protein_id="HSU41254.1"
                     /translation="MLSLVVPAVVCAVAACSSAESPSNPPAAGAAGAPQGSAGTTSHA
                     GASGTAASGGTGGTGGISSAGRAGTTGGSSGVGGSIAGVSGRGVGGAADTGGTGTAGA
                     ATGGMPALGGAAGRGTGGAGGRSSGGAPAGGMAGMAGRSAMGGSTSAGGSGSSIVGAT
                     PPMGWNSWNKFACDGLNETVVKKMADAFVTTGMKDVGYQYVNLDDCWMDGRDSSGKIK
                     VNSSKFPSGIASLADYVHGKGLKLGLYSTPNTKTCAGIYGGYSGGVGSKDHETDDAAT
                     WASWGVDYLKYDKCQGDLSRFATMRDALKKTGRPIFYSINPADQGPYCTPSSCSIDLV
                     NIANMWRIEFDISADWASVTRLIDKDKPEYAGAGPGHWNDPDMLEVGNGLNDTEGRAH
                     FSMWCIMAAPLITGNDLSSMSATTKAILTNPEVVAVDQDPLGQQGRVVAGSGTNQEVW
                     SKTLTGTNTRAVALFNRGSSSASITVKWSQIGIPAGSATVRDLWQAKDLGPFTDEYTA
                     SNVASHEVVMLKIVGGS"
     gene            complement(3169..5001)
                     /locus_tag="VLJ38_16880"
     CDS             complement(3169..5001)
                     /locus_tag="VLJ38_16880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41255.1"
                     /translation="MPWANSYVIARGRRAIALGRELWRVGALPLLGVALLGACGGAGG
                     AGDDDAANVSHSDPTAAVRETRPPFELGAQSAFYRLDLTRAADGTLSASGVELIDSAQ
                     YPLPSLSAEYLAVGYAGNTVVSAVPLAFPETAIRVGFSAGVPVHQTLELTDSTATVFV
                     KADASLDRIAVVASSGQLALELRAADLPERTAQSHWGVQAAEAPTGRSQEPISREQLA
                     FRYAHIRFLTAGDDKVLPAALLSGGFVISPTSTMNDTIADGIAKLAPALLSSVQMLAV
                     VRFPQGSTEATSVLGQALGAQLVLNADMMQDPEMPLTIVHEITHSFTFLSEAAATSNT
                     KDLSAWPVDVRNFALELVKRFRLVKGLPDVWSELHDSGVKAGYASPYTGNGNAWMSLT
                     DLAARAGGFASPYGSTSEWEDMAEYVGSTQAPTATTPGICPSFAGGGQVTPDVSIPYA
                     KLVLLLGLGAITEASFNTCVQGKTIQQQSGIDFPGAITFNSGLKSGYLAQDDGSTSYG
                     ILGSGRDSYQLLVEVSLDSKDASPLGLHRLDSIWLGNVGTPGLSAAYLGNDDTLLARA
                     GERGLVLFTEANAQRTAGAIFGLVLQNAAAVNTDYLPFGTFQIP"
     gene            complement(5110..6147)
                     /locus_tag="VLJ38_16885"
     CDS             complement(5110..6147)
                     /locus_tag="VLJ38_16885"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSU41256.1"
                     /translation="MKHDVPPGLMRKEQSVFVALLLVTLCLARFLGESALSLYVLFAL
                     TAMVTVGVSLLMGQAGQVSLGQGAFYACGAYTAGVLTTHGCPGAVALLVAPVAAAALA
                     AVIGVPLLLLRGHHLAFATLATHLIALSVIGEMTITGGDVGLQGIPRLRLGPLELDSV
                     RSYAYLSSLALAAVVLVARNILASRPGRALRALSSSELAAASSAIPVGRYKLAVFSLS
                     AAFAGLAGGIYAFYMGYLAPGSFPVLLSVEYVVMATIGGLGTIPGGVLGAAVVLLLVH
                     ALSRLATASGMPSTAPVILSYAVYAVLLITAVLFLPGGIVSAIAMARTRIARHRPTRG
                     ATDASTTGPSR"
     gene            complement(6154..>6703)
                     /locus_tag="VLJ38_16890"
     CDS             complement(6154..>6703)
                     /locus_tag="VLJ38_16890"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSU41257.1"
                     /translation="ILGYALEILVWGDEPRSFSGLDGSFELAGVEFPKQYVLVVGVTL
                     AVFALLEVFFERTYTGKAMSACASNPYAAQLVGISVTRMALFAFVFAGALGGVAGVLL
                     TPLSPLSYDSDLSLFVNGFAAAILAGLKRPVLALGGGLLLGVAQALVAGYAKASYQSM
                     LALLLTLAILVVQGARRPALGE"
BASE COUNT         1195 a         2195 c         2320 g          993 t
ORIGIN      
        1 cgcacggccg gagcttgtgg gcattcgggc ggcgcgtccc acgtgagctc gagtcggctc
       61 tgggccgccg cgtgcgagag cgtcgcggca caggcgaatc ccacgagcag cgcagtgcgg
      121 cgccgccttc cgcccgaggg ttcagggagg cggcgcaatg ctcacgtcgt ccacgtacag
      181 cgtggaatct ggcggggtca cagcgcccac caaattgccc acgtaccact gcccccacgt
      241 gacacccgtc agctccgtct ggatgccttt gacgtccacg atgggctggc cgtcttgata
      301 gagagtgatc ctccccgcca tgccttggtc ccgagccagg cggacttcga cgtggaacca
      361 ttcgcccgcg ctgatcgaag gcggcacgcc cgcgtcggcg tccgcagggt cggggattgt
      421 cttgcccgtg aggtgattcc ggagatagag cgtgtgcgga ccaccgtcgc cgtccgcgat
      481 ggagacgtcc cactcggcgc ccctgccagg gaggccgttc agcccgtcgg cggtgccccc
      541 gttgaagtac atgaggttcc agtttgcgcc cgcggtcgcc gtcgaggaca ggaaaaacca
      601 cgcgccgtaa acggcgtctg gcggcatcgc accttcgcga acgcaacggg tttgtttgcc
      661 gttgagcgcg tcgtcccctg tcacactgaa ctctgctgcg tgcaggcccg aatgcacggg
      721 cgcgtcgacg acggcgtagg acgcgtcggg gtccttgtag cagtagccct tcgcccgcgc
      781 gtacccgcag aagccgtcct cgaacccgtt ctgccacggc atcggcacgg gatctttaat
      841 ggagacgacc gaaccgtcag gcatcgtgcc cgctggcccg gaagaggacg tgcatggcca
      901 cgtgccgacc ttgagctcgg gctcacaggc cgcggaagta gcggcaagca tcaggagagc
      961 gaacttaccg aacacgcagc gctagtcttc acttttcgag tgtcgcttgt caccccccaa
     1021 acgccgctca gcgacgcctc ggacgggggc acctcggccg gcttcaacgg aaagtggtcg
     1081 ctcatgccac tgcttaatgc gaatgcgagc ggtgctttct ttggtcgtgc ctgcggtcgt
     1141 ctgcgccgtg gcggcttgtt cgagcgcgga gtccccgagc aatccacccg ctgcgggagc
     1201 cgcgggcgcg ccgcagggct ccgctgggac gacgagtcac gccggtgcta gcgggaccgc
     1261 tgctagcggt gggacgggcg gcacgggcgg catctcgagc gctggtcgcg ccggcacgac
     1321 tggaggcagc agcggcgtgg gcggcagcat agctggcgtg agtgggcgtg gcgtgggcgg
     1381 cgccgctgat acgggcggga caggcacggc tggtgcggcg accggcggca tgcccgcact
     1441 gggcggagcc gcaggccggg gcactggtgg cgcgggaggc aggagctccg gcggtgcacc
     1501 cgcgggcggc atggccggca tggctggtcg ctctgccatg ggtggctcga cgagcgctgg
     1561 cggttcgggt tcgagcatcg tcggcgcgac accgccgatg gggtggaact cgtggaacaa
     1621 gttcgcctgt gacggcctga acgagaccgt cgtgaagaag atggccgacg ccttcgtcac
     1681 gaccggcatg aaggacgtgg gctaccagta cgtcaacctc gacgactgct ggatggacgg
     1741 ccgcgactcg agcggcaaga tcaaggtgaa ctccagcaag ttcccttccg gcatcgcctc
     1801 gctcgctgat tacgtgcacg gcaaaggctt gaaactcggg ctctactcga ccccgaacac
     1861 caagacctgc gccggcatct acgggggtta ctccggcggc gtcggcagca aagatcacga
     1921 gaccgacgac gcggcgacct gggccagctg gggcgtcgat tacctcaaat acgacaaatg
     1981 ccagggcgat ttgagccgct tcgccacgat gcgcgacgcg ctcaaaaaga ccggccgccc
     2041 catcttctac agcatcaatc cggcggatca gggtccgtac tgcacgccct cgagctgctc
     2101 gatcgatttg gtcaacatcg ccaatatgtg gcgcatcgag ttcgacatct ccgcggactg
     2161 ggcctcggtg actcgcctga tcgacaagga caagccggag tacgcgggcg cgggccccgg
     2221 gcattggaac gatcccgaca tgctcgaggt cggcaacggc ttgaacgaca ccgaaggacg
     2281 cgcgcacttc agcatgtggt gcatcatggc ggcgccgctc atcacgggca acgatctgag
     2341 ctcgatgagc gcgacgacca aggcgatcct cacgaacccc gaagtggtcg cggtcgatca
     2401 ggatccgctg gggcagcagg ggcgcgtcgt ggccggctcg ggcacgaacc aggaagtctg
     2461 gtcgaagacc ctgacgggca cgaacacgcg cgcggtcgcg ctcttcaatc gcggctcgtc
     2521 gagcgcgtcc atcaccgtca aatggagcca aatcggtatc ccggcgggta gcgccacggt
     2581 gcgcgatctc tggcaagcca aggatctcgg cccgttcacg gacgagtaca cggccagcaa
     2641 cgtggcgagc cacgaggtgg tcatgctcaa gatcgtcggc ggcagctgat tccgggcgcg
     2701 ccgagagccg ctcaccggag cgtgcaccag ccggcttcac agcgaggcgc ggtcgcggcc
     2761 ggccggcacc ggtatagaca gcgattgcag gcggccttgt aggcggcaat ctcggctccc
     2821 aggacgtcga ggtccgtctt acggtgcacg gcctgggcgc agccgaaggg gcaccccggc
     2881 gtcatcacgc cgcagtcgcc gtccgtttca caacgcgcgg cgtcccggag ccgagcttgc
     2941 agacgcgcaa gactcgccgc gcagtcgacc gcgccggctg catcgccggc ggccgccggg
     3001 ctcactccgc gatcgagcgg cggcgccttc tcgctcgtag tggcgctcga aaagctcggc
     3061 gcgccgcgcg gcccgtgccg cgcatcgcaa gccgccccgc cgagcagcgg ggtgagcagc
     3121 gcgagcagac ggagcgatcc tcgcgctcga gttcgtcgcg cgcggcgttc atgggatttg
     3181 aaaggttcca aacggcaggt agtcggtgtt caccgcggca gcattctgga ggacgaggcc
     3241 gaagatcgcg ccggccgtgc gttgggcgtt tgcctccgtg aacaagacga gcccgcgctc
     3301 tccggcacgc gcgagcagcg tatcatcgtt gccgaggtac gcggcgctga ggccgggcgt
     3361 gcctacgttg ccgagccaaa tactgtcgag gcggtgcagg ccgaggggcg aagcgtcctt
     3421 ggagtcgagg ctcacctcca ccaagagctg gtagctatcg cgcccgctgc cgaggatgcc
     3481 atacgacgtg ctgccgtcgt cctgcgccaa atacccgctc ttcagtccgg agttgaaggt
     3541 gatggcgccg ggaaagtcga tcccggactg ctgctggatg gtcttgccct gcacacacgt
     3601 gttgaaggac gcctccgtga tggcaccgag accgagcagg aggacgagct tggcgtaggg
     3661 aatggagacg tcgggcgtca cctgcccgcc acctgcaaat gacggacaga tgccaggagt
     3721 cgtcgcggta ggcgcctggg tgctgcccac gtactcggcc atgtcttccc attccgaggt
     3781 ggagccatac gggctcgcaa agccgcccgc tcgagccgcc aggtccgtga gactcatcca
     3841 cgcgttaccg ttacccgtgt acggcgacgc gtagccggcc ttcacgcccg aatcgtgcag
     3901 ctcggaccag acgtcgggca gccccttgac gagccggaag cgcttcacga gctcgagcgc
     3961 gaaattgcga acgtcgacgg gccaggcgga gaggtccttg gtattcgacg tcgcggcggc
     4021 ttccgagaga aacgtgaagc tgtgcgtgat ctcgtgcacg atcgtgagcg gcatctcggg
     4081 gtcctgcatc atgtccgcgt tgagcaccag ctgggcgccg agcgcctgac cgagcacgct
     4141 cgtggcttcc gtgctgcctt gggggaagcg tacgaccgcg agcatttgca ccgagctcag
     4201 cagcgcgggc gcaagcttcg cgatgccgtc tgcgatcgta tcgttcatgg tgctcgtcgg
     4261 actgatgacg aagccgccgc tgagcagcgc tgcgggcagg accttgtcgt cacccgcggt
     4321 cagaaaccga atgtgggcgt agcgaaacgc gagctgttcg cgactgattg gctcctgcga
     4381 gcggcccgtg ggggcctccg ccgcttggac gccccaatga ctctgagcgg tgcgttccgg
     4441 caagtcggcc gcgcggagct cgagcgccag ctgtccgctc gacgcgacga cggcgatccg
     4501 atcgagcgac gcatcggctt tcacgaacac ggtggcggtc gagtccgtga gctccagggt
     4561 ctgatgcacg ggcacgcccg cgctgaagcc cacgcggatc gccgtctctg gaaaggcgag
     4621 cggaacggcc gagacgacgg tgttgccggc gtaacccacc gccaggtatt ccgcggagag
     4681 cgagggcaac ggatactgcg cgctgtcgat cagctcgact ccggacgccg acagcgtgcc
     4741 gtcggcggct cgcgtcagat cgagccgata aaaggcgctc tgcgcgccga gctcgaacgg
     4801 cggccgcgtc tcgcgcacgg ctgccgtcgg atcggagtgc gagacgttcg cagcatcgtc
     4861 atcgcccgct ccgccggctc cgccgcaagc gccgagcagc gcgacgccga gcagcggcaa
     4921 cgcgcccacg cgccagagtt cgcgtccgag cgcaatcgca cgccgtccgc gcgcgatcac
     4981 gtacgagttt gcccacggca tcaccgcgcc tagtacgcgg ggcgctctgc cctcggtcga
     5041 tcttttttcg cgagccacga tcggatgcag agcgtgggcc gaagaccccc atgcgttaaa
     5101 ggcggctgtt cagcgcgacg gccccgtcgt ggacgcatcc gtcgctccgc gcgtagggcg
     5161 gtgccgcgca attcgcgtcc ttgccatggc tattgccgat acgatgccgc ccggtaggaa
     5221 caagaccgcc gtaatcagca agacggcata gacggcgtac gacagaatca ccggtgccgt
     5281 actcggcatt ccgctcgccg tagcgaggcg gctcagtgcg tgaacgagca gcaagacgac
     5341 ggcggcgccg agcacgccgc ccggaatcgt cccgagcccc ccgatggtcg ccatcacgac
     5401 gtactcgacc gagagcagca ccgggaacga gccgggcgcg aggtagccca tgtagaaggc
     5461 atagatgccg ccggcgagcc ccgcgaacgc cgccgacagc gagaacaccg cgagcttgta
     5521 gcgaccgacg ggaatcgccg aagacgccgc cgcgagctcg ctgctcgaga gtgcgcgcaa
     5581 ggcgcggccg ggtcgggagg cgagaatgtt gcgagcgacg aggacgaccg ctgcgagcgc
     5641 gagcgagctc aggtacgcgt agcttctcac ggagtcgagc tcgagcggtc cgaggcgcag
     5701 gcgcgggatg ccttgcagtc ccacgtcgcc gcccgtgatg gtcatctcac cgatgaccga
     5761 caaagcaatc aggtgcgtcg cgagcgtcgc gaacgcaagg tggtgaccgc gcagcaagag
     5821 cagcggcacg ccgatcacgg ccgccagcgc ggcggcggca acgggcgcga cgagtagcgc
     5881 gacggcaccg gggcagccgt gcgtggtgag cacgcccgcg gtgtaggcgc cgcaggcgta
     5941 aaaggcgcct tggccgagcg acacttggcc cgcctgtccc atgagcagcg agacaccgac
     6001 ggtaaccatc gcggtgagcg cgaacagcac gtagagcgaa agcgcgctct cgccgagaaa
     6061 cctcgcgagg cacagcgtaa cgagtagcaa ggcgacgaag accgactgct ccttgcgcat
     6121 tagtcctggt ggaacgtcgt gtttcacgcg aggttactcg cccagcgcgg gccggcgcgc
     6181 cccttgcacg acgagaatgg cgagcgtgag gagcaacgcg agcatgcttt ggtaggaggc
     6241 tttggcgtag ccggcgacga gcgcttgggc gacgccgagc aatagtccgc cgcccagcgc
     6301 caagacgggg cgcttgagtc ccgcgaggat agctgcagcg aagccgttga cgaagagcga
     6361 tagatcgctg tcgtacgaga gcggcgagag cggcgtgagc agcactcccg ccacgccgcc
     6421 gagcgcgccc gcgaatacga aggcgaagag cgccatgcgc gtcacgctga tgccgacgag
     6481 ctgggcggcg tacggattcg acgcgcacgc gctcatcgcc ttgcccgtat aggtccgttc
     6541 aaaaaatacc tcgagcagcg cgaagacggc gagagtcacg ccgacgacga ggacgtactg
     6601 cttcggaaat tcgacgccgg cgagctcgaa cgagccatcg aggcccgaga acgaacgcgg
     6661 ttcgtcaccc cacaccaaaa tttcgagcgc ataccctaaa atg
//
LOCUS       DATIML010000976         2182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2228878, whole genome shotgun sequence.
ACCESSION   DATIML010000976 DATIML010000000
VERSION     DATIML010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2228878"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1705
                     /locus_tag="VLJ38_16895"
     CDS             <1..1705
                     /locus_tag="VLJ38_16895"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSU41258.1"
                     /translation="TLTSNQMSAVEVWTPRGVCRIHGRGYEPSGSIEANADARAAAER
                     LALAAVRASTGRALLRDGEWVPRGDPMEAGLHALALRLGVDVEIAACAEPEIARFAFD
                     PRRRRMSITTARSVFVKGAPDTVIALAGGSDTATQVASAMAARGLRVLAVAWRAIDRA
                     PPTDAVAAEAALELLGLVGLFDPPRPEVRHALARCRGAGMRIAVVTGDHPGTARAVAE
                     EVGLTPELVVSGDELPADEALLGALMDRDGVVACRVSPEQKLAIAKALQARGHVVAMT
                     GDGVNDGPALQQADVGIAMGKSGTDVARAAADLVLLDDRFETIVSAIEQGRGTFANIR
                     RFLTYHLTDNVSELMPFVFWALSGGRFPLALCVLQILCLDLLSDQLPALALGAEPPSP
                     RALEGGRRGQRLVDAALVIRAFVVLGLTESAVAMAAFVAVLLELGWHAGAGVPSPRTL
                     AAASGTAFVAVVCGQAATALACRSVSRPAFSVPLRNNPLVLWSLLATWAMVALLLYVP
                     WLARMLGHRPPTARGMFFALSAFPIILLTDFGFKAGLKHRRGHAACFETPAAPPPVSP
                     A"
     gene            1702..>2182
                     /locus_tag="VLJ38_16900"
     CDS             1702..>2182
                     /locus_tag="VLJ38_16900"
                     /inference="COORDINATES: protein motif:HMM:NF012893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HSU41259.1"
                     /translation="MIQSALIPSQHGAPGGERLELAADFARLETTAAGLTSSEAKRRL
                     ALLGANQAKGPGWPARVIAFVRPLTSPLIAILLVAGAASAFLGQRADAAIIGAMVFLS
                     TLIDVWQTKRSERAVRRLQATVAPTATVLRDGTWAELPRSAVVPGDVIRLGAGDLVPA
                     "
BASE COUNT          284 a          761 c          758 g          379 t
ORIGIN      
        1 cacgttgacc tcgaatcaga tgagcgccgt cgaggtctgg acgccacggg gggtctgccg
       61 cattcacggc cggggctacg agccgagcgg cagcatcgaa gcgaacgccg acgctcgagc
      121 cgccgcggaa cggctcgcgc tcgcggccgt gcgggcgtcg acggggcggg ccttgctacg
      181 cgacggggag tgggtgccgc gcggtgatcc catggaagcc ggcctgcacg cgctggcgct
      241 gcgcctcggc gtggacgtcg aaatcgcggc gtgcgcggag ccggaaatcg ctcgatttgc
      301 cttcgatccg cggcggcgac gcatgtcgat cacgaccgct cgttcggtgt tcgtcaaagg
      361 cgcgcccgac acggtgatcg cgctcgccgg gggctcggac acggcgacgc aggtggcctc
      421 cgcgatggcg gctcgcggtc tgcgcgtctt ggccgtcgcg tggcgtgcaa tagaccgggc
      481 tcccccgacc gacgctgtgg ctgccgaagc cgcgctcgag ctactcggac tcgtcgggct
      541 cttcgatccg ccgcgtccgg aggtgcggca cgctctcgca cgctgccgcg gcgcggggat
      601 gcgaatcgcc gtggtgacgg gcgatcatcc gggcacggcc cgtgcggtcg cggaagaagt
      661 cggactcacg cccgagctcg ttgtctcggg cgacgagttg cccgcagacg aggcgctgct
      721 cggggcgctc atggatcgtg acggtgtcgt ggcttgtcga gtgtctcccg agcaaaagct
      781 tgccatcgcc aaggcgctcc aagcgcgcgg gcacgtggtc gcgatgaccg gcgacggcgt
      841 caacgacggc ccagcactgc aacaggcgga cgtgggcatc gccatgggca agtcagggac
      901 ggacgtcgct cgcgccgcgg ccgatctcgt cctgctcgac gatcgtttcg agaccatcgt
      961 cagcgccatc gagcaagggc gcggcacgtt cgccaatatt cgccgctttc tcacctatca
     1021 cctgaccgac aacgtttcgg agctcatgcc tttcgtgttc tgggcgctct cgggcgggcg
     1081 atttccgctg gcgctctgcg tgcttcaaat cctctgcctc gatctcttga gcgaccagct
     1141 gccggccctc gcgctcggtg cggagcctcc gagcccgcgc gcgctcgaag gcggccggcg
     1201 cggacagcgt ctggtcgacg cggctctcgt catccgcgcc ttcgtcgtgc tcgggttgac
     1261 cgagtcggcg gtcgccatgg cggccttcgt cgcggtgctg ctcgagctcg gctggcacgc
     1321 gggggccggt gttcccagcc cgaggaccct cgccgcggca tcggggaccg ccttcgtcgc
     1381 cgtcgtttgc ggtcaggcag ccaccgctct cgcttgccgc agcgtttcac gacctgcttt
     1441 cagcgttccc ttgcgcaata accctctggt cctctggtcg ctgctcgcga cgtgggccat
     1501 ggtcgccctg ctgctgtacg tgccttggct cgcgcgaatg ctcggtcatc gcccgcccac
     1561 cgcgcggggg atgttttttg cgctctctgc ctttccgatc attctgttga cggactttgg
     1621 gttcaaagcg ggactcaagc atcgacgcgg ccatgcggcg tgcttcgaga cgcctgccgc
     1681 accgccgcca gtgagcccgg cgtgatccag tccgccctaa tacccagcca gcacggggct
     1741 ccgggcggcg agcggctcga gctcgcggcg gacttcgcgc gcctcgagac gaccgccgca
     1801 gggctgacga gctccgaagc caaacggaga ctcgccctgc ttggtgcgaa ccaggcaaaa
     1861 gggcccggtt ggccggcgag agtcatcgcc ttcgtccgtc ccctgacgag cccgctcatc
     1921 gccatcctgc tcgtcgcagg cgctgcttcg gctttcctcg gacagcgcgc cgacgccgcc
     1981 atcatcggcg cgatggtatt tctgagcacg ctcatcgacg tctggcagac gaagcgctct
     2041 gaacgcgccg tgcgccggct gcaagcgacg gtcgcgccga ccgctaccgt cctgcgtgac
     2101 gggacgtggg cggagctacc gcggtcggcg gtcgtgccgg gcgacgtcat ccgcttgggg
     2161 gccggcgact tggttccagc cg
//
LOCUS       DATIML010000977         3166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4833801, whole genome shotgun sequence.
ACCESSION   DATIML010000977 DATIML010000000
VERSION     DATIML010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3166
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4833801"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1570)
                     /locus_tag="VLJ38_16905"
     CDS             complement(230..1570)
                     /locus_tag="VLJ38_16905"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF004126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HSU41260.1"
                     /translation="MAKDTLSITDNRTGKTYEVAITDDTIRANDLRQIRVQEGDFGLM
                     TYDAGFLNTASCRSSITYIDGDAGILRYRGYPVDQLAENATYLEVAYLLINGELPTKS
                     ELDQFVSNVTHHTFVHENVRTFIDGFRYDAHPMGMLVATVGALSTFYPEAKHVLDGDI
                     RRAQMVRLIAKMPTLAAWSYRHSMGMPFVYPNNEMSYSENFLYMMKRIAEPKFEVHPE
                     IVRALDVLFILHADHEQNCSTNVMRGIGSSRADPYVAVAGAAAALYGPLHGGANEAVL
                     RMLREIGSVTNIPAFVKEVKGGGGRLMGFGHRVYKNYDPRAKVIKRLADQVMDLVGKK
                     SPLLPVAMELERIALSDDYFVSRKLYPNVDFYSGLIYEALQIPADMFPVLFAIPRTSG
                     WLAQWEEMLLDKDQKIARPRQIYTGYDERKFVPISDRRPPAAPASHSKPRAETD"
     gene            1788..>3166
                     /locus_tag="VLJ38_16910"
     CDS             1788..>3166
                     /locus_tag="VLJ38_16910"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU41261.1"
                     /translation="MGCLSSFGCAGRETAAADPPALKLAPANGGPSLEADEWAKVPVP
                     PEDGPKLAPVAMVVPVRKRPLPSAEVIGYLRAGARVARSERPVTLRECPGGWYAVRPL
                     GFVCAGPDATTKLDHPVARALDVEPDRQRPMPYKYAFLRAIAPNYLRVPNADEQETYE
                     MRLERHLKTWKKLHAEWDKLDVGANDVPLDSQGLAKGGVPDKAIPMDESVRFGGRGDD
                     RLPWWLDGGRRIPNLSSFKAPPYAVIADRSRRHAGFALIGSFVAGPEAQGRRFAVTTD
                     ARLLPADKLKPDSGSPFHGNDIRSVGLPVAFVHDESAHFWSLSGGNVNESEAAPFRAL
                     VPLNGNVRGSGDTRMVETRDGRWLKSSELRTVAKTSTLPPYARKGTKWIDISILNQTL
                     VLWEGDRPVYATLVSTGRDGLGDPATTHSTPTGMFRIYQKHVTTTMDSAVADHEFELR
                     DVPWVEYFKG"
BASE COUNT          531 a         1036 c         1050 g          549 t
ORIGIN      
        1 gcgggcggag ccgaatccgc gggacgctcc gacgtcgcca cacagctgac gaaaagcacc
       61 gaagccgaga gtataccgta gccgataagg agtttcgttc gcatcgccga gcacctttcc
      121 cggcgcgcgt gctcgaacga cgagcgctgc gccggactag ccgagcagag tagtcgggcc
      181 ccggtgacga ggcaatcgcg gccgaagccg ggcctacctc ctcggcggct cagtcggttt
      241 cagcgcgcgg tttactgtgc gaagcgggcg ccgcgggcgg gcggcgatcg gagatcggca
      301 cgaacttgcg ctcgtcgtag cccgtgtaga tttgccgcgg gcgcgcgatc ttctggtcct
      361 tgtcgagcag catttcttcc cactgcgcga gccagccgga cgtgcgcgga atcgcaaaca
      421 acaccgggaa catgtcggcc gggatctgca gcgcctcgta gatgaggccc gagtagaaat
      481 cgacgttcgg gtagagcttg cgcgagacga agtaatcgtc actgagcgcg atccgctcga
      541 gctccatcgc cacgggcaaa agcgggctct tcttgccgac gagatccatc acctggtcgg
      601 ccaggcgctt gatcaccttc gcgcgcggat cgtagttctt gtagacgcgg tggccgaagc
      661 ccatgagccg cccgccgccg cccttcactt ccttcacgaa agcagggatg ttcgtcacgc
      721 tgccgatctc gcgcagcatg cggagcacgg cttcgttggc gccgccgtgc agggggccgt
      781 agagcgccgc cgcggcgccg gcgacggcga cgtacggatc ggcgcgcgag ctgccgatgc
      841 cgcgcatgac gttggtcgag cagttctgtt cgtgatccgc gtgtaagatg aagagcacgt
      901 cgagcgcccg cacgatctcg gggtgcacct cgaacttcgg ctcggcgatg cgcttcatca
      961 tgtagaggaa gttctcgctg tagctcatct cgttgttcgg atagacgaac ggcataccca
     1021 tgctgtggcg gtagctccac gcggcgagcg ttggcatttt cgcgatcagc cgcaccattt
     1081 gcgcgcggcg gatgtcgccg tcgagcacgt gcttcgcttc cggatagaac gtgctgagcg
     1141 cgccgaccgt agcgacgagc atgcccatcg gatgcgcgtc gtagcggaag ccgtcgatga
     1201 aggtgcgcac gttctcgtgc acgaacgtgt gatgcgtcac gttcgacacg aattggtcga
     1261 gctcgctctt ggtcggcagc tcgccgttga tgagcaggta ggcgacttcg aggtacgtcg
     1321 cgttctcggc gagctgatcg accgggtagc cgcggtagcg caggatgccc gcgtcgccgt
     1381 cgatgtaggt gatggacgag cggcacgacg cggtgttcaa gaagcccgca tcgtaagtca
     1441 tgagcccgaa gtcgccttct tggactcgga tctgacgcag atcgttcgcg cggatcgtat
     1501 cgtccgtgat ggcgacctcg taggtcttgc ccgtgcggtt atcggtgatc gagagcgtat
     1561 ccttggccat cctgggtgcc cgtctttgct ttggcggccc cgcgttttcg aggccacggc
     1621 gcatagaacc atcgcgcagg gctttgtgcc agcgttggaa agcgtaaaga cgcgccgcgg
     1681 gcgctcggac gccggttccg gccgaaaact gggccaagcg ggcctgcttt tggcatccca
     1741 ccggagtgcg ctctccttca cgtcccccgg ctctagccgt cgcgctcttg ggttgcctct
     1801 cgagcttcgg ttgcgcgggg cgcgaaaccg ccgccgccga cccaccagcg ctcaagcttg
     1861 cccccgcgaa cggcggcccc tcgctcgagg ctgacgaatg ggccaaggtg ccggtgccgc
     1921 cagaagatgg accgaagctt gcgcccgtcg ccatggtcgt gccggtgcgc aaacgcccgc
     1981 tgccctcggc cgaggtcatc ggctacctcc gagccggcgc gcgtgtcgct cgctccgaac
     2041 ggcctgtcac cctacgcgag tgccccggcg gctggtacgc ggtgcggccg ctcggattcg
     2101 tgtgcgcggg accggacgcg accaccaagc tcgaccatcc ggtcgctcgc gccctggacg
     2161 tggagccaga ccggcaacgg ccgatgccct acaagtacgc gttcctgcgc gcgatcgcgc
     2221 ccaattacct gcgcgtgccg aacgccgacg agcaagagac gtacgagatg cgcctcgagc
     2281 ggcacctcaa aacttggaaa aagctgcacg ccgagtggga caagctcgac gtgggcgcga
     2341 acgacgtgcc gctcgactcc caggggctcg ccaaaggcgg cgttcccgac aaggcgattc
     2401 cgatggacga gagcgttcgc ttcggcgggc gtggcgacga ccgcttgccg tggtggctcg
     2461 acggtgggcg ccggatcccg aatctgtcgt cgttcaaagc gccgccgtac gcggtgatcg
     2521 ccgatcgcag ccgccgtcac gcggggtttg cgctcatcgg ctcgttcgtt gcggggcccg
     2581 aagcgcaggg ccgtcgcttc gccgtcacca ccgacgcgcg gctcctacct gccgacaaac
     2641 tcaaaccgga cagcggctca ccgtttcacg gcaacgacat tcgctcggtc ggactgccgg
     2701 tcgccttcgt gcacgacgag tcggcgcatt tttggtcgct gtcgggcggc aacgtgaacg
     2761 aaagcgaagc cgcgccgttt cgcgcgctcg ttccgttgaa cggcaacgtg cgcggttcgg
     2821 gtgacacgcg catggtcgaa acgcgtgacg ggcgttggct caagagcagc gagctccgca
     2881 ccgtcgccaa gacgagcacg cttccgccct atgcgcgcaa aggcacgaaa tggatcgaca
     2941 tctcgatctt gaatcagacg ctcgtgcttt gggagggtga ccgccccgtg tacgccacgc
     3001 tcgtctccac gggccgcgac ggcctcggcg atcccgcgac tacccacagc acgcccacgg
     3061 gaatgttccg catctaccaa aagcacgtca cgaccacgat ggactcggcg gtggccgatc
     3121 acgaattcga gctacgcgac gtgccctggg tcgaatactt caaggg
//
LOCUS       DATIML010000978         4698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5698157, whole genome shotgun sequence.
ACCESSION   DATIML010000978 DATIML010000000
VERSION     DATIML010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4698
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5698157"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2042)
                     /locus_tag="VLJ38_16915"
     CDS             complement(<1..2042)
                     /locus_tag="VLJ38_16915"
                     /inference="COORDINATES: protein motif:HMM:TIGR02068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41262.1"
                     /translation="MLQARVHLEHYEELPSNKLPGFTDRLMEWLPSLIEHRCGVGERG
                     GFLLRLREGTWLGHVLEHVTLELESLAHLPVGFGRARAAGPHGVYHVVVRADEPAFTE
                     ACMRAARELVMAAAEGQTFDVDTELRVLKELAEKLCLGPSTQAIVSAARERGIPYLRL
                     TDRSNLVQLGYGKAQRRIWTAETDGTAAVAESIAQDKELTRTLLRSVGVAVPEGRVVK
                     TAEDAWAAAIALGLPVVVKPQDGNWGRGVSIRLEDRAAVETAFQIAANEGSGVVVERF
                     VPGSQYRVLVVGEQAVAATGGEAEHVVGDGVHTIAELVERKNQEPSRGATTSHVLTKL
                     VIDDISLELLRRQGFTPKSVPAAGRVALIHYNGDLTVDVTDRLSPDVAASCVLAARTV
                     GLDIAGMDIIAEDISRSLESQGGAVIEVNASPSLAMHLRPLQGKPRPVGEAIVDHMFG
                     LGQTGRVPLLAITGSNRVDVVAALAGRLVTGAGYNVGQVDADGVRVGDHWLERGQPSR
                     AAGARRLLMNPFANAFVFALTEKSVLEEGLAFDRCQVAIVTDVSEPPPEPGVSGPTHA
                     WRALRTPVDVVLPNGVTVLNAADPAAVRMAEFRKTKVLYFAESLAAPPLAQHLAEDGS
                     AVVLEDGAAVLRQGATRTELVDAETLSAARLPGLTVTPSDWLAVLAAGIAFGMTVEA"
     gene            2255..>4698
                     /locus_tag="VLJ38_16920"
     CDS             2255..>4698
                     /locus_tag="VLJ38_16920"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1854 domain-containing protein"
                     /protein_id="HSU41263.1"
                     /translation="MEHDGLGHFPLEEGESILAVFQPDLNDRPNYESSVLVLTNRRLR
                     HRLPNGDWTEIPIEEGLDLERAERGGVGEIRALKAGQSVGVWTHTLAQARAASDLFDA
                     FLELRAPRTARALRHSIPEVDEWAPSTPTSRSPLLRLLGLARPHLGAVSLGLVLTLLS
                     TAAGLIPPYLTMPLVDRVLVPGAQGAFNNGLGRAYHDVALYLGGLGVAAFVAWLLAWA
                     QGAVLAAVTERMAADLRNRAFAHLQRLGLQYFGGKRTGDLVARISSDTDHLCAFLSDT
                     LIDFITDVLMIVSTSAVLLSLDPLLAVAAVASFPPIAWLIVTIRGSLSHGFLRGGRAW
                     SAMTSILADAIPGIRVVKAFSQEQREIERFERANQRIVDVNTRINRVWTFFWPLVQLL
                     NQAGLLVVWAVGAWQVLHGRVTVGVLTAFIAYISRFYTRVESMSRMLTQTQKAAAGAQ
                     RLFEILDRAPTELEPKHPVRQPQIRGEVTFEHVSFRHGNRLVLDDVSFRVEPGHMVGI
                     VGHTGSGKSTVANLVCRFYDVSSGAVLIDGVDVRRLSVEEHRRHIGIVLQEPFLFFGT
                     IGENVAYGLPPATPQQILAAARAARAHDFVLKLMEGYDSLVGERGQSLSGGERQRIAI
                     ARAILVDPRILILDEATSAVDARTERQIQRALDAVVAGRTTIAIAHRLSTLRKADLLV
                     VLRDGRVVEHGAPAELLARDGEYARLWRAQNAAAAEAATAEAAQEDDDELDLPDAPRL
                     DRGPLRLETAAGTGLVAVAADGTRTSVSPRRCFPFTHPDHFVSLVDERGHERACFEDP
                     KALDPDSRSALAAALEA"
BASE COUNT          728 a         1634 c         1567 g          769 t
ORIGIN      
        1 gcctctacag tcatgccgaa cgcgatgccc gccgcgagta cggcgagcca gtcggacggc
       61 gtcacggtaa gtcccgggag ccgagcagcc gacaacgtct ccgcgtcgac gagctcggtg
      121 cgagtcgcgc cttggcgcaa cacggcagcg ccgtcttcga gcacgaccgc gctgccgtct
      181 tcggcgaggt gctgagcgag cggaggagcc gcgaggctct cggcgaagta gagcaccttg
      241 gtcttgcgga actcggccat gcgcaccgcc gccggatcgg cggcgttgag tacggtgacg
      301 ccgttcggca acaccacgtc gacgggcgtg cggagcgcgc gccaggcgtg cgtcggtccc
      361 gagacgcccg gttcgggcgg gggctcgctc acgtcggtga cgatcgccac ctgacaacga
      421 tcgaaggcga gtccttcttc cagcacgctc ttctccgtga gggcgaagac gaaggcgttc
      481 gcgaacggat tcatgagcaa gcgccgcgcg cccgccgccc gcgacggctg cccgcgctcg
      541 agccagtgat cgcccacccg cacgccgtcc gcgtcgactt gacccacgtt gtaaccggcg
      601 cccgtcacca agcgcccggc gagcgccgcg acgacgtcca cgcggttcga gccggtgatc
      661 gcgagcagcg gcacgcgccc cgtctgtccg aggccgaaca tgtgatccac gatcgcttca
      721 ccgaccggcc gcggcttgcc ctgtagcggc cgcagatgca tcgccaagct cgggctcgcg
      781 ttcacctcga tcacggcgcc gccttggctc tcgagcgagc gcgagatgtc ctcggcgatg
      841 atgtccatac ccgcgatgtc gaggccgacc gtgcgcgcgg cgagcacgca gctcgccgcg
      901 acgtcggggc tcaaccggtc cgtcacatcg accgtgaggt cgccgttgta gtgaatcagg
      961 gcgacgcgtc cggcggcggg caccgacttg ggcgtgaaac cctgacgccg caagagctcg
     1021 agcgaaatgt cgtcgatgac gagcttcgtg agcacgtgcg acgtggtcgc gccgcgcgag
     1081 ggctcttgat tcttgcgctc gacgagctcg gcgatcgtgt gcacgccgtc accgaccacg
     1141 tgctcggctt ccccgcccgt ggccgcgacg gcctgctcac caacgacgag cactcggtac
     1201 tgcgagcccg gcacgaagcg ttcgacgacg acgcccgagc cttcattcgc tgcaatctga
     1261 aacgccgtct cgacggctgc gcggtcctcg agtcgaatcg acacgccgcg gccccaattg
     1321 ccgtcttgcg gcttgacgac gacgggcagc ccgagcgcga tcgccgcggc ccacgcgtcc
     1381 tccgcggtct tgaccacgcg accttccggc acggcgacac cgaccgagcg caagagcgtg
     1441 cgggtgagct ccttgtcctg cgcgatgctc tcggcgacgg ccgcggtgcc gtcggtttca
     1501 gccgtccaga tccgccgctg cgccttgccg tacccgagct gaacgaggtt gctgcggtcg
     1561 gtcagccgca agtacgggat gccgcgctcg cgggcggcgc tcacgatggc ttgtgtgctc
     1621 gggccgagac acagcttttc ggcgagctcc ttcaagacgc ggagctccgt gtcgacgtcg
     1681 aacgtttgtc cctccgccgc cgccatcacg agctcacgcg cagcgcgcat acacgcctcg
     1741 gtgaacgcgg gctcgtcggc gcgaacgacc acgtgataga cgccatgcgg cccggcggcg
     1801 cgcgcgcgcc cgaagccgac gggcaggtgc gccaacgact cgagttcgag cgtcacatgc
     1861 tcgagcacat gaccaagcca ggtcccctct cgcaggcgga gcaaaaatcc tccacgttcg
     1921 ccgacaccgc aacgatgctc gatgaggctc ggcagccact ccatcaggcg gtccgtgaag
     1981 cccgggagct tgttactcgg gagctcctcg taatgttcga ggtgcacccg cgcctggagc
     2041 acagggaaat tggcccatat attcgggcct ttaagcgcga ctacctgctg gatctgcatg
     2101 ctgggccgag gcgggcgccg gaggcgacac ctctcggacc gtgggtagga cgcacgaggt
     2161 cggtgtatcg gctcgattgc cttgcggttg cgcgaagcga cacgaaaagg caacgtcggc
     2221 gccggctgag cccgcgttga gggcggacta ttccatggaa cacgatggtt tgggccattt
     2281 cccgctcgaa gaaggcgaga gcatcctcgc cgtattccag cccgacttaa acgatcgtcc
     2341 taactacgaa tcgagcgttc tcgttttgac gaatcggcgg ctgcgtcacc ggctgccgaa
     2401 tggcgactgg actgagatcc cgatcgagga gggtctggat ctcgagcggg ccgagcgcgg
     2461 aggcgtcgga gaaatccgcg cgctcaaggc cggtcagtcg gtcggtgttt ggacgcatac
     2521 gctggctcaa gcacgcgccg cgtccgatct cttcgacgcg ttcttggagc tgcgtgcccc
     2581 gcgaaccgcg cgcgcgctta ggcactcgat cccggaggtc gacgagtggg cgccttccac
     2641 tcctacgagc cgttctccgt tgctgcgctt gctcgggctc gcgagaccgc acctcggcgc
     2701 cgtctcgctc gggctcgtgc tcacgctcct cagtactgcg gcgggactca tcccgccgta
     2761 cctgacgatg ccgctcgtcg accgcgtgct cgtccccggc gcgcagggcg cgttcaataa
     2821 cggactcggt cgcgcctacc acgacgtcgc gctctatctg ggcgggctcg gcgtcgccgc
     2881 cttcgtcgcg tggctgctcg cctgggcgca gggcgccgtg ctcgccgccg tcaccgaacg
     2941 catggcggcg gacttgcgca acagagcgtt tgcgcatctg cagcgcctcg gcctccagta
     3001 cttcggcggc aagcgcacgg gcgacttggt cgcgcgcatc agctccgaca ccgatcacct
     3061 gtgcgccttc ctctccgaca cgctgatcga cttcatcacg gacgtgctca tgatcgtgag
     3121 cacctcggcg gtcttgctct cgctcgatcc gctgctcgcc gtggcagccg tcgcgtcgtt
     3181 tccgccgatc gcgtggctga tcgtgacgat tcgcgggagc ttgtcgcacg gctttttgcg
     3241 cggcgggcgc gcgtggtcgg cgatgacgag catcctcgcg gacgccatcc cgggcattcg
     3301 cgtggtcaaa gcgttctcgc aagagcaacg cgagatcgaa cgcttcgaac gagccaatca
     3361 gcgcatcgtc gatgtgaaca cgcgcatcaa ccgcgtctgg accttcttct ggccgctcgt
     3421 gcagctcttg aatcaggcgg ggctgctcgt ggtctgggcc gtcggcgctt ggcaggtgct
     3481 gcacggacgc gtgacggtcg gcgtgctcac ggcgttcatc gcgtacatca gtcgcttcta
     3541 cacgcgcgtc gagagcatga gtcgcatgct cacgcagacg cagaaggcgg cggcgggggc
     3601 gcaacgtcta ttcgagatcc tcgatcgtgc gccgaccgag ctcgagccga aacacccggt
     3661 gcgccagccg cagatccggg gcgaggtcac gttcgagcac gtttcatttc ggcacggcaa
     3721 ccgcctggtg ctcgacgacg tgagcttccg cgtcgaaccc ggacacatgg tcgggatcgt
     3781 gggccatacg ggctcgggca agagcaccgt cgcgaatctc gtctgccgct tctacgacgt
     3841 ttcgagcgga gccgtgctga tcgacggcgt cgacgtgcgg cggctctcgg tcgaagagca
     3901 ccgccgccac atcggcatcg tgctccagga gccgttcttg ttcttcggca ccatcggcga
     3961 aaacgtcgcc tacggcctgc cgccggcgac gccgcagcaa atactcgcgg cagcgcgtgc
     4021 ggcgcgtgcg cacgacttcg tgctcaagct catggagggc tacgactcgc tcgtcgggga
     4081 gcgtggtcaa tcgctctcgg gcggcgaacg gcagcgcatc gcgatcgcgc gcgccatctt
     4141 ggtcgatccg cgcatcttga tcttggacga ggcgacgtcg gccgtcgacg cgcgcacgga
     4201 gcggcagatc cagcgagcgc tcgacgccgt cgtcgccgga cgcacgacga tcgcgattgc
     4261 gcatcgcttg agcacgctgc gcaaggcgga tctgctcgtc gtgctccgtg acgggcgcgt
     4321 ggtcgagcac ggagcgcccg cggagctact cgcgcgcgac ggcgagtacg ctcggctctg
     4381 gcgcgcgcaa aacgccgcag ccgccgaagc cgcgaccgcc gaagccgcgc aggaagacga
     4441 cgacgagcta gacctgcccg acgcgccacg gctcgatcgg ggcccgctcc ggctcgaaac
     4501 cgccgccggc acagggctgg tcgcggtcgc cgccgacggc acgcgcacga gcgtgagccc
     4561 gcggcgttgt ttccctttca cgcatcccga ccatttcgtc tcgctcgtcg atgagcgcgg
     4621 tcacgagcgt gcctgcttcg aggatcccaa agcgctcgac ccggattccc ggagcgcgct
     4681 cgcagccgcg ctcgaggc
//
LOCUS       DATIML010000979         5222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4539860, whole genome shotgun sequence.
ACCESSION   DATIML010000979 DATIML010000000
VERSION     DATIML010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5222
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4539860"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..749)
                     /locus_tag="VLJ38_16925"
     CDS             complement(<1..749)
                     /locus_tag="VLJ38_16925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41264.1"
                     /translation="MSSFGAFVAQVREHRRLVVALGVALALALLFAPTLVGHAKFASD
                     RFTFADDVRVLIYPQFRLEDPTLFPHDPAVTYYLASLPDGYALLYRVLAPLFAVVALS
                     KALPYVLFAVTLACVSATAWRLAGGAAAFGSLALALGSSYLLGRMAGGLPRGFAAPLL
                     AAGTLALVQGRARALAIIAVVAAGFYPAAALTLGVTLALLLVMPRSMRGAASAWSLRR
                     RLVVIGVTAATAALLLLPSAWRLRAWGPAIGP"
     gene            910..3321
                     /locus_tag="VLJ38_16930"
     CDS             910..3321
                     /locus_tag="VLJ38_16930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41265.1"
                     /translation="MILLVAAAAFFLRVVNESYPVEEWLFWHYATYWVACGVWLAGVL
                     GVGHLTVTRGFRLSLPLGEATVTALAVGLFEFELAMLLAGVVHAFRAPMFVALPLAFV
                     LGGARSLRSLWRAFRRLLRRQRPSLGVTGALAIGLGIVVFAMIYFAMLSPENVQFDSR
                     WKHMSLAEDWVAYGGLRRHDEGWLFAARPHITTLLFTWAFLLPGALLFDKMLLCAHLE
                     FVIFAITTVVGIPALVRRLVPRADPRVVWAARFLFPGVLVYDSSLSAGADHIGALFGI
                     PAALLLFRVWRRLELRPTLLLAAVLSAALLVKETTALVLLPFPACAVVLRAGMLALRH
                     FRGQGSAEELRNAWRTPLLAAGAALLLTTPLWLENLIWYGDPLYPILNKFFSPRPWSP
                     DAAYRFHYGYQDEQLWAPSRDLKGLIDTLRALVTYSFEPHDWKRFHHAVPVFGSLFTL
                     LLVTVPLYRGSRRLWALIGWVHLGIFAWFSVHHQDRYLQGLMPLMAGATAAMLLAIWR
                     GDSRVVRGALVLLVGLQLVWGGDAYFFQTHAMARSPLKKSIDLLSAGFEHKYDSRFNI
                     QQSYQSVGKLLPKTARLLMHETNINLGTGVTTVLDNPGWQYAIEYGSLKSPADMVPLL
                     RGLGVTHVYARTDRSKGKDSIAGDIRFLDYVRRRATKTTSVAGGTLVEVSDLPPGPFD
                     DTVAMLSCGSDYEPGQYLVSDLATPPFGPRVHELPAPRRPATLPDDAASLVDTSEYVV
                     VDPHCFDGPVPRLHDAHTLLTHRAGSGGRMAAYEIWARGSLALRKSRPAPSEPEDDQD
                     EPGEP"
     gene            complement(3297..4364)
                     /locus_tag="VLJ38_16935"
     CDS             complement(3297..4364)
                     /locus_tag="VLJ38_16935"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU41266.1"
                     /translation="MSEPSLDLSVIIPVYNEEESVKHLLEELHAALDPTGFHFELVLV
                     DDGSTDRTWTLLEGFAASDPALSVIQFRRNFGQTAAMQAGLDAARGSRIVTMDADLQN
                     DPADIPAMLQKLDEGYDLVAGWRKYRKDPFLNRKLPSMIANRLISIATKVKLHDYGCT
                     LKAMTSDVAKELRLYGEMHRFIPAVASWIGARIFEMPVNHRARRYGSSKYGIGRTLRV
                     VLDLITVRFIQSYLTRPMQVFGFGGLLSLGLGGLLCAWLAFEKLAFHARLSDRPLLLL
                     GVLLIVVGLQLVSLGLVADVLSRTYHESQDKKPYYVRARRVGAGSTGALPRVTQSKPP
                     PAQTTPPPPPQRKAQGSPGSS"
     gene            4529..>5222
                     /locus_tag="VLJ38_16940"
     CDS             4529..>5222
                     /locus_tag="VLJ38_16940"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HSU41267.1"
                     /translation="MSQRHVKVGLIQTAVSADKAANIKKTARLIEDAAARGARIVCLQ
                     ELFASEYFCQREDAELFNLAESVPGPTTQMMAEVAKSRGVSIVVPLFERRAAGVYHNS
                     LVLIGPNGDIAGHYRKMHIPDDPLFYEKYYFTPGDLGFMSIPTPEAAVGPLICWDQWY
                     PEAARMTAMSGAEILVYPTAIGWHPSEKAQYGASQLSAWQTMQRAHAISNGVFVVAVN
                     RVGHEGAAPGGLE"
BASE COUNT          809 a         1788 c         1759 g          866 t
ORIGIN      
        1 ggaccaatcg ccggacccca cgcgcgcagc cgccacgcgg acggcaagag caagagcgcc
       61 gcagtcgcag ccgtgacgcc aatgacgacg agccgccgcc ggagtgacca ggcgctcgca
      121 gcgccccgca tgctgcgcgg catgacgagt aagagcgcca gcgtcacccc gagcgtcagc
      181 gcggcagcgg gataaaatcc cgccgcaacg acggcgatga tcgcgagcgc ccgcgcgcgg
      241 ccttgcacga gcgccagcgt ccccgctgca aggagtggcg ccgcgaagcc gcgcggcaac
      301 ccgcccgcca tgcgcccgag caagtacgac gaaccgagcg cgagcgcgag cgacccgaac
      361 gccgccgcgc cgcccgcgag ccgccaggcc gtggcgctga cacacgcgag cgtcacggcg
      421 aagaggacgt acggcagcgc tttgctgagc gcgacgaccg cgaacagcgg agctagcaca
      481 cgatagagca gcgcgtagcc gtccggcaga ctcgcgaggt agtaggtgac cgcggggtcg
      541 tgagggaaaa gcgtcgggtc ttcgagcctg aactgcggat aaatcagcac tcggacatcg
      601 tcggcgaacg tgaagcgatc gctcgcgaac tttgcgtggc cgacgagggt cggagcaaac
      661 agcagcgcca gcgcgagggc cacgccgagc gctacgacga gtcgccggtg ctcgcggacc
      721 tgtgcgacga acgctccaaa gctcgacacg gcgcggagtc tatacgccga tcccctcgag
      781 ccggcgctcg gcagcgctga ctcgccgagc cgccgcggcc gagccgtacg ccttgcgcga
      841 cttttgagat aagctccgcg ccccttgccc tcgttcttca ccgggccccg cgctcgctca
      901 gtcgtcggcg tgatcctgct cgtcgcggcg gccgcgttct tcttgcgggt cgtgaacgag
      961 tcgtaccccg tcgaggagtg gctgttttgg cactacgcga cgtactgggt cgcgtgcggc
     1021 gtgtggctcg cgggcgtgct cggtgtcggg cacctgacgg tgacgcgcgg cttccggctg
     1081 tcgctgccgc tcggcgaggc gacggtgacg gcgctcgccg tcggcctgtt cgagttcgag
     1141 ctcgccatgt tgctggcggg cgtggtgcac gcgtttcgcg cgccgatgtt cgtcgcgctg
     1201 ccgctcgctt tcgtgctcgg cggtgcgcgt tcgctgcgtt cgctctggcg cgccttccgg
     1261 cgcttgctcc ggcgccagcg accttcgctc ggcgtcacgg gcgcgctcgc gataggcctc
     1321 gggatcgtcg tgttcgcgat gatctacttc gcgatgcttt cgccggagaa cgtgcagttc
     1381 gattcgcgct ggaagcacat gtcgctcgcg gaagattggg tcgcttacgg cggcctgcgg
     1441 cgacatgacg agggctggct cttcgcggcg cggccgcaca tcacgaccct gctcttcacc
     1501 tgggccttcc tgttgcccgg cgcgctgctc ttcgacaaga tgctgctctg cgcgcacctc
     1561 gagttcgtga ttttcgcgat cacgacggtg gtgggtatcc cggcgctcgt gcgacggctc
     1621 gtgccgcgag ccgatccgcg cgtcgtgtgg gcggcgcgtt tcttgtttcc gggcgtgctg
     1681 gtttacgaca gctcgctcag cgccggcgcc gatcacatcg gcgcgctgtt cggcatcccg
     1741 gcggcgctgt tgctctttcg cgtctggcgt cgactcgagc tgcgcccgac gctgttactc
     1801 gccgccgtgc tctcggccgc gctgctcgtc aaagagacga cggcgctcgt gctcttgccg
     1861 ttccccgcgt gcgccgtggt gctccgcgcc ggtatgctcg cccttcggca ttttcgcggg
     1921 caaggcagcg ccgaggagct cagaaacgcc tggcgcacgc cgctcttggc cgccggcgcc
     1981 gcgctgctgc tcacgactcc gctctggctc gagaacctga tttggtacgg cgatcccctc
     2041 tatcccatcc tcaacaaatt cttctcgccg cgcccgtggt cgcccgacgc cgcctaccgc
     2101 ttccactacg gctaccaaga cgagcagctg tgggcgccgt cacgtgatct caagggcctc
     2161 atcgacacgc tccgagcgct cgtgacgtat tcgttcgagc cgcacgattg gaagcgcttt
     2221 caccacgccg ttcccgtctt tggctcgctc ttcacgctgc tgctcgtgac cgtgccgctc
     2281 taccgcggct cgcggcggct ctgggcgctg atcggctggg tgcacctcgg cattttcgcg
     2341 tggttctcgg tgcaccatca ggatcgctac ctgcagggcc tgatgccgct gatggcaggc
     2401 gcgacggcgg cgatgctgct cgccatttgg cgcggcgatt cgcgcgtcgt gcgcggcgcg
     2461 ctcgtcttgc tcgtgggact tcagctcgtg tggggcggcg acgcctactt cttccagacg
     2521 cacgcgatgg cgcgctcgcc gctcaaaaaa tcgatcgatc tactgagcgc cggcttcgag
     2581 cacaagtacg actcgcgctt caacatccag cagtcgtacc aatccgtcgg caagctgctg
     2641 cccaaaaccg cgcgcctctt gatgcacgag acgaacatca atctcggcac gggcgtgacc
     2701 acggtgctcg acaaccccgg ctggcagtac gccatcgaat acggctcgct caaaagcccg
     2761 gccgacatgg tgccgctctt gcgcggcctc ggcgtgacgc acgtctacgc ccgcaccgac
     2821 cgcagcaaag gcaaagacag catcgccggc gacattcgct ttttggacta tgtgcggcgc
     2881 cgggccacga agacgacgtc cgtggccggc ggcactttgg tggaggtaag cgatctgccg
     2941 cccggcccct tcgacgacac ggtcgcgatg ctcagctgcg gctcggatta cgagcccggg
     3001 caatacctcg tgagcgattt ggcgacgccg ccgttcggcc cgcgcgtgca cgagctgccg
     3061 gcgccgcgcc gccccgcgac cctaccggac gacgcggcga gcctcgtgga cacgagcgag
     3121 tacgtcgtcg tcgacccgca ctgcttcgac ggccccgtgc cgcgcctcca cgacgcgcac
     3181 acgctgctca cgcaccgtgc cgggtcgggc ggtcgcatgg cggcgtacga aatctgggcg
     3241 cgcggctcgc tcgcgctgcg caaatcgcgc cccgcgccga gcgaacccga agacgatcag
     3301 gacgagccgg gcgaaccctg agccttgcgc tgcggcgggg gcggtggcgt ggtctgcgcg
     3361 ggcggcggct tgctctgcgt cacgcgcggc agcgcgcccg tactccccgc gcccactcgg
     3421 cgcgcccgca cgtaataggg cttcttgtcc tgcgactcgt ggtacgtgcg cgacagcacg
     3481 tcggcgacga gcccgagcga gacgagttgc aggccgacga cgatcaggag cacgccgagc
     3541 aagagcagcg ggcggtcgga caagcgcgca tgaaacgcga gcttttcgaa ggcgagccag
     3601 gcgcacagta gtccgccgag gccgagactc aggaggccgc cgaagccgaa aacctgcatc
     3661 gggcgcgtga ggtacgactg gatgaagcgc accgtgatga ggtcgagcac gacgcgcagc
     3721 gtgcggccga tgccgtactt cgacgagccg tagcgccgcg cgcggtggtt caccggcatc
     3781 tcgaagatgc gcgcgccgat ccacgaagcg accgccggaa tgaagcgatg catctcgccg
     3841 tagagccgga gctccttggc gacgtcgctc gtcatcgctt tgagcgtgca gccgtagtcg
     3901 tgaagcttca ccttcgtcgc gatgctgatc agccgattgg cgatcatcga cggtagcttg
     3961 cggttcaaga acggatcttt gcggtacttg cgccagccgg ccacgaggtc gtaaccctcg
     4021 tcgagcttct gcagcatcgc ggggatgtcg gcggggtcgt tctggagatc cgcgtccatc
     4081 gtgacgatgc ggctgccgcg cgccgcgtcg agcccggctt gcatcgccgc cgtctggccg
     4141 aagttgcgcc ggaattgaat gacggacagc gcggggtcgc tcgcggcgaa gccctcgagc
     4201 agcgtccaag tgcgatcggt cgagccgtcg tccacgagca cgagctcgaa atggaagccg
     4261 gtcggatcga gcgcggcgtg cagctcctcg aggaggtgct tgacgctctc ctcctcgtta
     4321 tagacgggga tgatgaccga aaggtcgagg ctaggttcgg acatgtcgcg ggcgaaggtc
     4381 cggagggtgc acgagccgag gccgtagccg caagtctgcg ttcccgtcac gcgttcgtca
     4441 gcgggttttg gggggctccg gtcgcgcgcg ggcccgaacc gggccgcgac gttcgaaacc
     4501 cgcgcaagcc ctgctacgtt gcgccgcgat gtcccaacgc cacgtcaagg tcgggctgat
     4561 tcagaccgcg gtgagcgccg acaaagccgc gaacatcaaa aagacggcgc ggctcatcga
     4621 agacgccgcc gcacgcggcg cgcgcatcgt ctgcctccaa gaactcttcg cctccgagta
     4681 cttttgccag cgcgaagacg ccgagctctt caacctcgcc gagtcggtgc cgggtccgac
     4741 cacgcaaatg atggcggagg tcgcgaaaag ccgcggcgtg agcatcgtcg tgccgctgtt
     4801 cgagcggcgc gcggcgggcg tttatcacaa cagtctcgtg ctcatcggac cgaacggcga
     4861 catcgcgggc cactaccgca agatgcacat ccccgatgat ccgctgtttt acgagaaata
     4921 ctacttcacg ccgggcgatc tcggcttcat gagcatcccc acgcccgaag ccgccgtggg
     4981 tccgctcatt tgctgggacc agtggtaccc ggaagcggcg cgcatgacgg ccatgtccgg
     5041 cgccgagatc ctcgtttatc cgacggcgat cggctggcac cccagtgaaa aggcgcagta
     5101 cggcgcctcg cagctttcgg cgtggcaaac gatgcagcgc gcgcacgcga tttcgaacgg
     5161 cgtcttcgtg gtcgccgtca atcgcgtggg ccacgaaggc gcggcgccgg gcggcttgga
     5221 at
//
LOCUS       DATIML010000980         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_208518, whole genome shotgun sequence.
ACCESSION   DATIML010000980 DATIML010000000
VERSION     DATIML010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208518"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1164
                     /locus_tag="VLJ38_16945"
     CDS             <1..1164
                     /locus_tag="VLJ38_16945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41268.1"
                     /translation="ILPAPLATGPDTPKAAGEAAPSDAGVDAETAPPASAREDQPLTA
                     DDEELHDLSGVTLHARFRWPDLALPPRLPETNSEALDRARSAATFELDANLAAAGRLR
                     VVFATPRFVLPAGSELRARSGNYGHALLWPDGAWYVVVQPGALRSLLNERRADVVPLA
                     HFAGLARGASQTLGFPAERLSFVTALGRLELEQAHVAAAGAGGALLCRFLVELAGVHP
                     DTVACRPELVPARAEYSWAEGGRLVFEVTELERSSALELTTLRAPPATASHRIGEVPV
                     PDSALLVERGQLRTFRLRPTPLKPSRDAPREGLVVVNGDDLLRYALIDGVPVARLEAK
                     SPGLVLDLVPGSYSASARTFLGDEVTPPSVVTAPGRFTTAEGPRQEAQERRGE"
     gene            complement(1190..1780)
                     /locus_tag="VLJ38_16950"
     CDS             complement(1190..1780)
                     /locus_tag="VLJ38_16950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41269.1"
                     /translation="MTGALPPDPIPEYVNACLEYVRRATGFELDFSGETLPVLDHYVG
                     TVRETLTERPEVAQLVARAAGAYFGEVVRTIVPGFWRVPSASVHDWQLCSRVAYLWVN
                     PVGIAYDALHASSEHDGPRSLLRCAPEDRPYLERRLSTLPPLPEDQYYLFTTRLEVLE
                     VANEALHARLEEQGYGETELTEDDYAAGRGGTPLDS"
     gene            1846..>2396
                     /locus_tag="VLJ38_16955"
     CDS             1846..>2396
                     /locus_tag="VLJ38_16955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSU41270.1"
                     /translation="MRLGILSDIHANYEALGAVVEAFKGESIDRYYCLGDTVGYGGSP
                     NECSDLVRELVVATILGNHDAAVAGRMDYSYYYEAARHALDLHAQLLSEENMRWLKGL
                     PYQLKLDDIGVHLCHGSPVRLEEFEYIFAPEQARECLPLYDELGHITLIGHSHLCKVF
                     ALTPNSVEELPPIDFDLSSDRKY"
BASE COUNT          388 a          844 c          782 g          382 t
ORIGIN      
        1 attttgcccg caccgctcgc gaccgggccg gacacgccaa aagccgccgg ggaagccgca
       61 ccgagcgacg cgggtgtcga cgccgagacc gcgccgcccg catccgcgcg cgaggaccaa
      121 ccgctcacgg ccgatgacga ggagctgcac gatctctcgg gcgtgacact gcatgcgcgc
      181 ttccgctggc ccgacctggc gctcccgccg cgcctgcccg aaacgaacag cgaagcgctc
      241 gaccgcgcac gcagtgcggc gacgttcgag ctcgatgcga acctcgccgc cgcgggccgg
      301 ctgcgcgtcg tgttcgcgac cccccgcttc gtgttgcccg ccggcagcga gctccgcgcg
      361 cggagcggca actatggcca tgccctcctc tggccggacg gcgcgtggta cgtcgtggtt
      421 caaccaggcg cgctccggag cctcttgaac gaacggcgcg ccgatgtcgt gccgctcgcg
      481 cacttcgctg ggctcgcgcg cggcgcctcg cagacgctag gatttcccgc cgaacggctg
      541 tccttcgtca cggcgctcgg ccgactcgag ctcgaacaag cgcacgtcgc cgcggcgggc
      601 gcgggcgggg cgctgctctg ccggtttctc gtggagctcg cgggcgttca cccggacacc
      661 gtggcctgtc gcccggagct cgtccccgca cgcgctgagt acagttgggc cgaaggcgga
      721 cggctcgtgt tcgaggtgac agagctcgaa cgctcgagcg cgctcgagct gacgacactg
      781 cgcgcgccgc ccgcgacggc gagtcatcgt atcggcgagg tgccggtccc cgattccgcg
      841 ctgctcgtcg aacgcggcca gctgcgcacg ttccggctcc ggcccacacc cctgaagccg
      901 agcagggacg cgccacgcga ggggctcgtg gtcgtcaacg gcgacgattt actgcgctac
      961 gccttgatcg acggtgtgcc ggtcgcgcgg ctcgaggcga agagtcccgg cctcgtcctc
     1021 gatctggtcc cggggagcta ctccgccagc gcacgcacgt ttctgggcga cgaagtgacg
     1081 cccccgagcg tcgtcaccgc acccgggcgc ttcactacgg cggaggggcc ccgacaggaa
     1141 gctcaagagc ggcgcggcga gtgaacgcca tcaccctccg gagtcgcctt caggaatcca
     1201 gcggcgttcc accccgaccg gcggcgtaat cgtcctcggt gagctcggtc tcgccgtagc
     1261 cctgctcctc gaggcgcgca tgtaaggctt cgttcgcgac ttccagcacc tcgagccgag
     1321 tagtgaacag atagtactgg tcctctggca ggggtggcag ggtcgaaagc cggcgttcga
     1381 ggtaaggccg gtcctctggg gcacaccgca acagcgagcg cggtccgtcg tgctcgctcg
     1441 aagcgtgcaa ggcgtcgtac gcgattccaa cggggttgac ccataaatag gcgacccgcg
     1501 agcagagctg ccagtcgtgg acgctcgcgg acggaactcg ccaaaacccc ggcacgatcg
     1561 tgcgcaccac ctccccgaag taggcccccg cggcccgcgc gaccagttgt gcgacttccg
     1621 gccgctctgt caaagtctcg cggaccgtcc ccacgtaatg gtcgaggacg ggcagggttt
     1681 caccgctgaa atccagctcg aagcccgtcg cccgccggac gtactcgaga caagcgttca
     1741 cgtattcggg aatgggatca ggaggaagcg cgccggtcac ggtccggagc atagcccgac
     1801 gggtgtttgc gggctttcat gatagcctcc gcttctcttc cccccatgcg tctcggcatc
     1861 ctgagcgaca tccacgccaa ctacgaagct ctgggagcag tggtcgaggc gttcaaggga
     1921 gagagcatcg atcgctacta ctgtctcggc gatacggtcg ggtacggtgg ctctccgaac
     1981 gagtgctccg atctcgtgcg cgagctcgtg gtcgcgacga tcctcggcaa ccacgacgcc
     2041 gcggtcgcgg ggcgcatgga ctactcgtac tactacgagg ccgctcgcca cgcgctcgac
     2101 ctccacgcgc agctcttgtc ggaagagaac atgcgctggc tcaagggact gccgtatcag
     2161 ctcaagctcg acgacatcgg cgtgcacctc tgccacggct cgccggtacg gctcgaggag
     2221 ttcgagtaca tcttcgcacc cgagcaggca cgcgaatgtt tgccgctcta cgacgagctc
     2281 ggccacatca cgctgatcgg gcattcgcat ttgtgcaaag ttttcgcgct cacgccgaac
     2341 agcgtcgaag agctgccgcc catcgatttc gacttgtcgt ccgaccgcaa gtacat
//
LOCUS       DATIML010000981         2577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_499573, whole genome shotgun sequence.
ACCESSION   DATIML010000981 DATIML010000000
VERSION     DATIML010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499573"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2053)
                     /gene="nifJ"
                     /locus_tag="VLJ38_16960"
     CDS             complement(<1..2053)
                     /gene="nifJ"
                     /locus_tag="VLJ38_16960"
                     /inference="COORDINATES: protein motif:HMM:TIGR02176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HSU41271.1"
                     /translation="MDANEAVASVAYRLNEVIGIYPITPASAMGEWCDEWSALGKSNL
                     WGATPSVVEMQSEGGAAGAVHGALQAGALATTFTASQGLLLMLPNLYKIAGELLPCVI
                     HVAARTVATHALSIFCDHSDVMACRQTGFALLASASVQEAQDFACIAQAATLESRIPF
                     IHFFDGFRTSHELMRVRTLADDDLRALIGEERVTSRRHAALSPDHPSVRGTAQNPDTF
                     FQAREATNRFYAECPTRVSAVMARFAERTGRHYRLFEYAGHSEAERVIVAMGSAATTV
                     AATVRELASRGIKVGALKVALYRPFAAEHFLRELPPTVRRIAVLDRTKEAGALGEPLY
                     LDVVAALTESGRIRETEVSGGRYGLGSKEFTPAMVARVFDELGSTRPKRHFSLGVNDD
                     VTLESLDVQEGFELTRDQTYEAVFYGLGSDGTVGANKNTIKILGDDGGYEVQGFFVYD
                     SRKAGAVTVSHLRFAHASIARPYLVTRADFVACHQFELLERLPVIEHVRAGGTLLVNT
                     PFEPGLLWEHLCRETQAEIVAKRLRVHAIDGYRVAREAGLGRHVNTVMQACFFALSGL
                     MPTEQSAVALRRAVETSYGKKGPDVVRQNLAALENARAALRPLDLPKAPAADARGRAP
                     LVPPDAPDFVQRVTATLLAGNGDRLPVSAFPVDGVWPTGTSHFEKRRLALAIPVWDAE
                     LC"
     gene            2312..>2577
                     /locus_tag="VLJ38_16965"
     CDS             2312..>2577
                     /locus_tag="VLJ38_16965"
                     /inference="COORDINATES: protein motif:HMM:NF012893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HSU41272.1"
                     /translation="MHLLIGGTSALPAGLSSLAAAERLALDGPNEVPLVPPPAAWRRI
                     AAELFHFFALMLWVAGGLAVASGMPELGVAIFLVIVLNGLFAFA"
BASE COUNT          412 a          873 c          867 g          425 t
ORIGIN      
        1 tgcagagctc ggcgtcccaa accggaatcg ccagcgcgag cctgcgtttc tcgaagtggc
       61 tcgttcccgt cggccagacg ccgtccaccg gaaacgcgct caccggcagc cgatcgccgt
      121 ttccggcgag tagcgtcgcg gtcacacgct gaacgaaatc cggtgcgtcg ggaggaacga
      181 gcggagcgcg tccgcgcgcg tccgcggcag gagctttggg caagtcgagc gggcgcaagg
      241 cggcccgcgc attctcgagc gccgccagat tttgccgcac tacatcggga cctttcttgc
      301 cgtagctcgt ttcgacggcg cgccgcaagg cgacggcact ctgctcggtc ggcatgagcc
      361 cgctgagtgc gaagaagcac gcctgcatca ccgtgttgac gtgcctgccg agccccgctt
      421 cccgagcgac acggtagccg tcgatggcgt gcacgcgcag gcgcttcgcc acgatttcgg
      481 cttgtgtctc gcgacagaga tgctcccaca agagcccggg ctcgaacgga gtgttgacga
      541 gcagggtgcc ccctgcgcgc acgtgctcga tgaccggcag tcgttcgagc agctcgaatt
      601 ggtggcacgc cacgaaatcg gcccgcgtca cgaggtaggg ccgagcgatc gacgcgtgag
      661 cgaagcgcag gtgcgagacc gtcaccgcgc cggctttgcg cgaatcgtag acgaagaagc
      721 cttgaacttc gtaaccgccg tcgtcgccca ggatcttgat cgtgttcttg ttggctccga
      781 cggtgccgtc cgagccgagg ccgtagaaga cggcttcgta ggtttggtcg cgcgtgagct
      841 cgaagccctc ctgcacgtcg agggactcca gcgtcacgtc gtcgttcacg cccagcgaga
      901 agtgtcgctt gggccgcgtg ctcccgagct cgtcaaagac gcgcgcgacc atggcgggcg
      961 tgaactcctt cgaccccagg ccgtagcggc ccccgctgac ctccgtctcg cgaatgcgac
     1021 cggactcggt cagtgccgcc acgacatcga gatagagcgg ctcgccgagc gccccggctt
     1081 ccttcgttcg gtcgaggacg gcgatgcggc ggaccgtagg cggcagctcg cgcaaaaagt
     1141 gctccgccgc gaagggtcgg tacagcgcca ccttgagcgc acccaccttg atcccgcgcg
     1201 aggcaagctc gcgcacggtc gcagcgaccg tcgtcgcggc cgagcccatc gccacgatca
     1261 cgcgttcggc ctcggagtgc cctgcgtact cgaagagccg gtagtgccgt cccgtgcgct
     1321 ccgcgaagcg cgccatgacg gcgctgaccc gcgtcggaca ctctgcgtag aagcggttcg
     1381 tcgcctcgcg tgcttggaag aaggtgtccg gattctgcgc cgtaccgcgc acggagggat
     1441 ggtccggact gagagcggcg tgccggcgac tcgtgacgcg ctcttcgccg atcagggctc
     1501 gaagatcgtc gtccgcgagc gtgcggacgc gcatgagctc gtgcgaggtg cgaaacccat
     1561 cgaaaaagtg aatgaagggg atgcgactct cgagcgtcgc cgcttgcgcg atgcaggcga
     1621 agtcttgcgc ctcctgcacg ctcgccgagg cgagcagcgc gaagcccgtc tgccggcagg
     1681 ccatgacgtc cgagtgatcg cagaaaatgc tgagcgcgtg cgtcgcaacc gtgcgggccg
     1741 cgacgtgaat cacgcagggc agcagctcac ccgcgatctt gtagaggttc ggcagcatca
     1801 acagcagacc ttgcgaggcc gtgaacgtcg tcgcgagcgc gccggcttgg agcgctccgt
     1861 gcacggctcc cgcggcgccg ccttccgact gcatttcgac gacgctcggt gtcgcgcccc
     1921 aaaggttcga tttgcccagc gccgaccatt cgtcgcacca ctcgcccatc gcggacgcgg
     1981 gcgtgatggg gtagataccg atcacctcgt tcaagcggta cgcgaccgag gccacggcct
     2041 cgttcgcgtc catcgttcga agttcaccgg cgggcatgct gcgttcggct gcagagtccg
     2101 tgcctggccc gcggcttcac gcttccacgc tgcgcgcggc gctgacctgc accaagtgtt
     2161 cgctcgcaac cgcgctctac gcgcagcagt tgcgcgatcg cgaagaacga gcgaatggat
     2221 tgcgcgcggc tgcccgaaaa tgggcgagcc tcgaccgatc ccgggcggcg cacatcctgc
     2281 aacgcgggcc cgcaactcct cggaaagctc catgcatctt ctgatcggtg ggacgagcgc
     2341 gctgcccgcg ggtctgagtt cgctcgccgc agccgagcgg ctcgcgctcg acggaccgaa
     2401 cgaggtcccg ctagtgccgc cgccggccgc gtggagacgc atcgcggccg agctcttcca
     2461 cttcttcgcg ctgatgctgt gggtcgccgg cggcttggcc gtcgcgagcg gcatgccgga
     2521 gctcggagtc gcgatttttc tggtgatcgt gctgaacgga ctgttcgcgt tcgccca
//
LOCUS       DATIML010000982         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3098267, whole genome shotgun sequence.
ACCESSION   DATIML010000982 DATIML010000000
VERSION     DATIML010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3098267"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1619
                     /locus_tag="VLJ38_16970"
     CDS             <1..>1619
                     /locus_tag="VLJ38_16970"
                     /inference="COORDINATES: protein motif:HMM:NF018208.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41273.1"
                     /translation="EHTRQLRERQKNDLAQSRGTLNDTALHIERDEKQLADLRAEIEE
                     LEPQLETSKLMEESAATAFADAEQALQLWQQTWEDFNRSLGAAHQTTQVERARIEQLE
                     NQLRRFMAQADRLAVERETLAAQSPDEQLAVFAEKEAQARLTSEELADTLARALEVVQ
                     SLRSEQITVESRLEQTRSDRERKRSELMSLEALQKAALSHQAGKAADWLAGRGLAHNT
                     RVGQTLQVEQGWERAVETALGDYLEAVCVDRLEEIAGALEGFNSGRLALVEPSERADL
                     NEPGSLASKVKGPAAVVSPLADVITADTLTEALAARASLPPGKSIITRQGEWLGRNWL
                     RISRGEDRHSGVIEREHRLKSLRTEFDVAEERVKGMEAHLSSVRQSLADAERERDSAQ
                     AGIQGAHRQHTDLLGQLEATRARAQESALRRARLEEEGTEVAREVGVAQETLARARGE
                     LDRGLQTLGELDSRRPDLEYEREERREMVASRRSAAQQAQLAARDILVRMESRRSTES
                     SVSVTLARMTEQRAQLTTRVADLERELANGD"
BASE COUNT          294 a          563 c          556 g          206 t
ORIGIN      
        1 tcgagcacac gcgtcagctg cgcgaacggc agaagaacga tctcgctcaa tcgcgcggca
       61 cgctgaacga caccgcgctc cacatcgagc gcgacgaaaa gcagctcgcc gacctgcgcg
      121 ccgagatcga agagctcgag ccgcagctgg aaacctcgaa gctcatggag gagtccgcgg
      181 ccaccgcgtt tgcggacgcc gaacaggcgc tgcagctgtg gcagcagacc tgggaagact
      241 tcaaccgctc gctcggcgcc gcgcaccaga ccacgcaggt cgagcgcgcc cgcatcgagc
      301 agctcgagaa ccagctgcgc cggttcatgg cccaggcgga tcgccttgcc gtcgagcgtg
      361 aaacgctcgc cgcgcagagc cccgatgagc agctcgccgt cttcgccgag aaggaagccc
      421 aggcgcgcct cacgagcgaa gagctggcgg atacgctggc gcgcgcgctc gaagtagtgc
      481 agagcctgcg ttccgagcag atcaccgtcg agtcgcgcct cgagcagacg cgctcggatc
      541 gtgagcgcaa gcgctccgag ctgatgtcgc tcgaagcgct gcagaaggcc gcgctcagcc
      601 atcaggccgg caaagcggcg gactggctcg ccggtcgcgg cctcgctcac aacacgcgcg
      661 tcggccagac gctgcaggtg gagcagggct gggagcgcgc cgtcgaaacc gcgctcgggg
      721 attacctcga agccgtttgc gtcgatcgtc tcgaagaaat cgctggcgcg ctcgaaggct
      781 tcaacagcgg ccggctggcg ctggtcgagc cgagcgagcg cgcggatctg aacgagcccg
      841 ggagcctcgc ctcgaaggtg aagggtcccg ccgcggtcgt tagcccgctc gccgacgtga
      901 tcacggcaga tacgcttact gaagcgctcg ccgcgcgcgc gtcactgccg ccgggcaagt
      961 cgatcatcac gcggcagggc gaatggctcg gtcgcaactg gttacgcatt agccgcggcg
     1021 aagatcgcca cagcggcgtc atcgagcgcg agcatcgcct caagtcgctg cgtaccgagt
     1081 tcgacgttgc agaagagcgc gtcaaaggca tggaggccca cctcagctcc gttcgccagt
     1141 cgctcgccga tgccgagcgg gagcgcgata gcgcgcaggc cggcatccag ggcgcgcacc
     1201 gacagcacac ggatcttctc ggccagctcg aagccacgcg cgctcgcgcg caggagtccg
     1261 cgctgcgccg ggcccgcctc gaagaggaag ggaccgaggt cgctcgcgaa gtcggcgtgg
     1321 cgcaggaaac actggctcgc gcccgcggtg agctcgatcg cggcctgcag acgctcggcg
     1381 agctcgattc gcgtcgcccg gatctcgaat acgaacgcga agagcgtcgc gagatggtgg
     1441 cgtcgcgccg ctccgccgcc cagcaggcgc agcttgccgc gcgggacatc ctcgtgcgca
     1501 tggagtcgcg ccgctccacc gaaagctccg tgagcgtcac gctcgctcgc atgacggagc
     1561 agcgcgcgca gctcaccacg cgcgtcgccg acctcgagcg cgagctcgcg aacggcgat
//
LOCUS       DATIML010000983         5543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2518999, whole genome shotgun sequence.
ACCESSION   DATIML010000983 DATIML010000000
VERSION     DATIML010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5543
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2518999"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(299..1372)
                     /gene="pheS"
                     /locus_tag="VLJ38_16975"
     CDS             complement(299..1372)
                     /gene="pheS"
                     /locus_tag="VLJ38_16975"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HSU41274.1"
                     /translation="MSGSESETLELTPIVERARGRFEGATTEHELRALKAEILGKKGE
                     LTAQLRSLGQAPPEQRKLIGERVNAAKAEVEAAFEARLRNLADAARRAELEGPPFDLT
                     LPGRVTAPRGHLHPVTRVKWEILDIFRSLGFSVAWGPEVDLERNNFERLGFPPDHPAT
                     DMQDTFWVDVKGATAGVRALLRTHTSTVQVREMSTREPPLAVVSGGPVYRRDDDVTHS
                     PMFHQIEGFLVDERTNFAELKGVLGEFARRLYGPECSVRFRPSYFPFVEPGAEMDVTC
                     VFCRPDDGSRASCRVCKASGWLEVLGCGMIHPEVFRHCGIDAERYRGFAFGLGVDRVA
                     MLRYGIPDIRLLFENDPRFLTQF"
     gene            complement(1388..1741)
                     /gene="rplT"
                     /locus_tag="VLJ38_16980"
     CDS             complement(1388..1741)
                     /gene="rplT"
                     /locus_tag="VLJ38_16980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HSU41275.1"
                     /translation="MSRVKRGPSPRRRHKRVLAQTEGFFGGRKNRYRQAMRVLWKAWQ
                     YAYVGRKLRKRDFRSLWITRINAACRLNGTTYSKLMASLGKAGIELDRKTLAEMALND
                     AAAFTKLVGLASSAG"
     gene            complement(1761..1958)
                     /gene="rpmI"
                     /locus_tag="VLJ38_16985"
     CDS             complement(1761..1958)
                     /gene="rpmI"
                     /locus_tag="VLJ38_16985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HSU41276.1"
                     /translation="MPKMKTNRAAAKRFKVTGSGKVRRPKGSAQHNMIGKNRKRRRRL
                     RDNDIVSSAMEKRVKILLPYG"
     gene            2236..>5543
                     /gene="carB"
                     /locus_tag="VLJ38_16990"
     CDS             2236..>5543
                     /gene="carB"
                     /locus_tag="VLJ38_16990"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF003671.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HSU41277.1"
                     /translation="MPRRDDLKKILLIGSGPIVIGQACEFDYSGTQGAKALTSLGYDV
                     VLVNSNPATIMTDPELVRRTYIEPLTRASLSAIIERERPDALLPTLGGQTALNLALDL
                     HESGVLSRFGVKLIGAQVDAIRKAEDRLLFKEAMKNCGLECPRSGYATTVEEGRKVAE
                     LTGYPLILRPSFTMGGGGSAVVDGPEELEAKLSWALLQSPTHQVLVEESVIGWKEFEL
                     EVIRDRKDNFIVICTIENIDPMGVHTGDSITVAPAMTLTDREYQRLRDAARTVMHEIG
                     VETGGSNVQFAVDPKTGRMLVIEMNPRVSRSSALASKATGYPIAKVAAKLAVGFTLDE
                     LTNDITGTSAAFEPVIDYVIVKWPRFAFEKFPGADPRLGTQMKSVGEVMAIGRTFAEA
                     LQKAARSLETGKTGFMSLVDRVDYRVLAREPEGHGRDLTRDAPPTAKPRPTLPPPAGN
                     ELRVALERLIGVPTAERLFYVGDALRQGMTVAEIFAKTAIDPWFLTQLERIVKHESVI
                     RSAPELGAELLLETKRLGFSDAQIAELRGTTQDQVRAHREGLEIRAVFGRVDTCAAEF
                     PATTPYLYSAYESESEADVSARRKVIILGGGPNRIGQGIEFDYCCCHAVFALRELGIE
                     TIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLAICKEEASRGELLGVIVQFGGQTPLK
                     LSVPLERAGVRLLGTPADAIDRAEDRERFDELLAKLGLKRPRAGIAKTVEEAKRIAAS
                     IGYPVLVRPSYVLGGRAMMTCATDAELEAYVGVAIDAARDEGGSQTLLIDQFLKNAIE
                     VDVDMVCDGRQAVVGGVMQHIEEAGVHSGDSTSVLPPHGLGAGIVAEIEACARSLALE
                     LGVIGLMNVQLAVKDDDVYVLEVNPRASRTVPFVAKATGRPLAKIAAKCMVGMTLEEL
                     GVTDGFLPTHVAVKESVFPFAKFPGVDTILGPEMRSTGEVMGIGQSFALAFDKSLEAA
                     GNTLPSRGRCFISVKDDDKEQACHVARRLRNLGFSIVATGGTADAFTRARIPAERVNK
                     VLEGSPHVVDAMRAGGIQMVINTTHGAKAIADSYSIRRNALLANIPYFTTIAAGLAAV
                     DALEVRHLLTTAQVR"
BASE COUNT          939 a         1829 c         1876 g          899 t
ORIGIN      
        1 agtccgcgag atttgttgca gggcggggca gaagcggccg aagcaggcac acgttgccgt
       61 aggggtaaaa cagaaaacgt ctcatggaca ttcccggtta agcggccggc gcatcttgca
      121 agtaccctgg agggcttgca gcctgtcaac gcaggtacca aggaccgcaa ggattgcgga
      181 gctaccggca cagcgtgtgc cgaccggctg acttacctgt cgcagcctga ggcttggggc
      241 gtcaccgggt gagaccatcg agactgctct tccttggcgc ggggttcgaa accgcgcgtc
      301 agaactgcgt caggaagcgg gggtcattct cgaaaagcag acggatgtcc gggatcccgt
      361 acctgagcat cgcaacgcga tccacgccga gcccgaaggc gaaccctcgg taacgttcag
      421 cgtcgatgcc gcagtggcga aacacctcag ggtgaatcat cccgcagccg agcacctcga
      481 gccatccact cgctttgcac acgcggcacg acgcgcgcga gccgtcatcg ggacggcaaa
      541 aaacgcaggt tacgtccatc tccgcgcccg gctcgacgaa cggaaagtag ctcgggcgaa
      601 agcgtacgga acattcgggc ccgtagaggc gccgcgcaaa ttctccgagt acgcccttga
      661 gctcggcgaa attcgtgcgc tcgtcgacga ggaagccctc gatctggtgg aacatcggcg
      721 agtgcgtgac gtcgtcgtcg cggcggtaga cgggcccgcc gctcacgacg gcaagcggcg
      781 gctcgcgcgt gctcatctcg cggacctgaa ccgtgctcgt gtgggtccgt aagagcgcgc
      841 gcacgccggc cgtcgcgccc ttcacgtcca cccaaaacgt atcctgcatg tcggtcgcgg
      901 gatgatccgg cggaaagccg aggcgctcga agttgttgcg ctcgaggtcg acctcaggtc
      961 cccaggcgac gctgaacccg agcgaacgga agatgtccaa gatttcccat ttgacgcgcg
     1021 tcacggggtg caggtgcccg cggggagctg tcacgcggcc gggcagcgtg aggtcgaagg
     1081 gggggccttc gagctcggcc cggcgcgccg cgtcggcgag attccggaga cgcgcctcga
     1141 aagcggcctc gacctccgct ttggcggcgt tgacgcgctc gccgatgagc ttgcgctgct
     1201 cgggcggcgc ctggccgagc gagcgcagct gcgccgtgag ctcgcccttt ttgcccagga
     1261 tctcggcttt gagcgcgcgg agctcgtgct cggtcgtcgc accttcgaag cggccccggg
     1321 cgcgctcgac gatgggcgta agctcgagcg tttcgctctc ggagccggac acggaccgcg
     1381 tccgtgctca gccggccgag ctggctagcc ccacgagctt cgtgaaggct gcggcgtcgt
     1441 tcagggccat ttcggcgagc gtcttgcgat cgagctcgat cccggccttg ccgagcgagg
     1501 ccatgagctt cgagtacgtc gtgccgttca ggcggcaggc ggcgttgatg cgggtgatcc
     1561 agaggctccg gaaatcgcgc ttcctgagct tgcggccgac gtaggcatac tgccacgcct
     1621 tccacagaac gcgcatcgcc tggcggtaac ggttcttgcg cccaccgaag aaaccctcgg
     1681 tctgggcgag cacgcgcttg tgacggcggc ggggggacgg acctcgttta acgcgggaca
     1741 tagcgatgaa cctctgcgga tcagccgtaa gggagcagga tcttcacgcg cttctccatc
     1801 gcggaagata cgatgtcgtt gtcgcgcagg cggcgccggc gcttgcggtt cttgccgatc
     1861 atgttgtgct gcgcgctccc cttcggcctg cggactttgc ccgatccggt cactttgaag
     1921 cgcttggcag cggcgcgatt cgtcttcatc ttcggcatgg gaagctccaa aaacccggtc
     1981 gagcgcccgg ggagcgcgga cttatgacgg aagggccgct cctcgtcaag ggacgagcga
     2041 tttcccgagc tccggccttg ggctttccgc cggcgcggta gccgacgagc gccggcagcc
     2101 gaccgagcag acctcgctgc ctaataagga gagggtggtg cccgagctgc tccagtaggg
     2161 catcgcacgg gcttggtccg cccggcagaa agccttccga gtcaacgccc ccgacgtgct
     2221 aagcggcacc ctgccatgcc tcgccgtgac gacctcaaaa agattctgct catcggttcc
     2281 gggccgatcg tgatcggtca ggcatgcgag ttcgactact cgggcactca gggggccaag
     2341 gcgctcacga gcctcggcta cgacgtggtg ctcgtcaatt cgaacccggc gacgatcatg
     2401 accgacccgg agctcgtgcg gcgaacctac atcgagccgc tcactcgcgc ctcgctgtcc
     2461 gccatcatcg aacgcgagcg gcccgacgcg cttttgccga ccctcggcgg ccaaaccgcg
     2521 ctgaacctcg cgctggattt gcacgagtcc ggcgtgctct cgcgcttcgg cgtgaagctc
     2581 atcggtgcgc aggtggacgc gatccgtaag gcggaagatc gcctgctctt caaggaagcc
     2641 atgaaaaatt gcgggctcga gtgcccgcgc tccggctacg cgaccacggt cgaggagggg
     2701 cgcaaggtgg ccgagctcac gggctacccg ctgattttgc ggccgagctt cacgatgggc
     2761 ggcggtggca gcgccgtggt cgatgggccc gaggagctcg aagcgaagct ctcgtgggcg
     2821 ctcctgcagt cgccgaccca ccaggtgctc gtcgaagaga gcgtcatcgg ctggaaggaa
     2881 ttcgagctcg aggtcatccg cgatcgcaag gacaacttca tcgtcatctg cacgatcgag
     2941 aacatcgatc cgatgggcgt ccacaccggc gactcgatca cggtcgcgcc ggccatgacg
     3001 ctcaccgatc gcgagtacca gcggctgcgc gacgcggcgc gcacggtcat gcacgagatc
     3061 ggcgtcgaga cgggcggctc gaacgtgcag ttcgccgtcg atcccaagac gggccgcatg
     3121 ctcgtgatcg agatgaatcc gcgcgtttcg cgctcgagcg ccctcgcgtc gaaggcgacg
     3181 ggctatccca tcgccaaggt cgcggcgaaa ctcgccgtcg gcttcacgct cgacgagctc
     3241 acgaacgaca tcacgggcac gagcgccgcg ttcgagcccg tgatcgacta cgtcatcgtc
     3301 aagtggccgc gcttcgcgtt cgagaagttc cccggcgcgg accccaggct cggcacgcaa
     3361 atgaagagcg tcggcgaggt gatggcgatc gggcgcacct tcgccgaagc gctgcagaag
     3421 gcggcgcggt cgctcgagac cggcaagacc ggcttcatga gcctcgtcga tcgcgtcgat
     3481 taccgcgtgc tcgcgcgcga gcccgagggc cacggccgcg atctcacgcg cgacgcgccc
     3541 ccgacggcca agccccgccc gacgttgccg ccgcccgcgg gcaacgagct ccgtgtcgca
     3601 ctcgagcggc tcatcggcgt gccgacggcg gagcgcctgt tttacgtcgg cgacgcgctc
     3661 cgccaaggca tgaccgtcgc ggagatcttc gcgaagacgg cgatcgatcc gtggtttttg
     3721 acccagctcg agcgcatcgt gaagcacgag agcgtcatcc gttcggcgcc cgagctcggc
     3781 gccgagctct tgctcgagac caagcggctc ggcttcagcg atgcgcagat cgccgagctc
     3841 cgcggcacga cgcaagacca ggtgcgtgcg caccgcgaag ggctcgagat ccgcgccgtg
     3901 ttcggacgcg tcgacacctg cgccgccgag ttcccggcca cgacgccgta cctctactcc
     3961 gcgtacgaat cggaatcgga agccgatgtc tccgcccggc gcaaggtcat cattttgggt
     4021 ggtggcccga accgcattgg tcagggcatc gagttcgact actgctgctg ccacgcggtg
     4081 tttgccctgc gcgagctcgg gatcgagacc atcatggtca actgcaatcc cgagacggtc
     4141 tcgaccgatt acgacacctc cgatcgcttg tacttcgagc cgctcacgct cgaagacgtg
     4201 ctcgcgatct gcaaggaaga agcgagccgc ggcgagctct tgggcgtgat cgtccagttc
     4261 ggcggtcaga cgccgctcaa gctcagtgtg ccgctcgagc gtgcgggcgt gcggctgctc
     4321 ggtacgccgg ctgacgccat cgaccgcgcc gaggatcgcg agcgcttcga cgagctgctc
     4381 gccaagctcg gtttgaagcg gccgcgcgcc gggatcgcca agaccgtcga agaggccaag
     4441 cgcatcgcgg cgagcatcgg ctacccggtg ctcgtgcggc cgtcttacgt gctcggcggg
     4501 cgcgcgatga tgacgtgcgc gaccgacgcg gagctcgagg cgtacgtcgg cgtcgcgatc
     4561 gacgcggcgc gcgacgaagg cggctcgcag acgctgctca tcgatcagtt cttgaagaac
     4621 gcgatcgagg tcgacgtcga catggtgtgc gacggccgcc aagcggtcgt gggcggcgtg
     4681 atgcagcaca tcgaggaggc cggtgtgcac tcgggcgact cgacgagcgt cttgccgccg
     4741 catgggctcg gcgccgggat cgtcgccgaa atcgaggcgt gcgctcgttc gctcgcgctc
     4801 gagctcggcg tgatcggtct catgaacgtg cagctcgcgg tcaaggacga cgacgtgtac
     4861 gtgctcgaag tgaacccgcg cgcctcgcgc accgtgccgt tcgtcgcgaa agccacgggc
     4921 cgcccgcttg ccaagatcgc ggccaagtgc atggtcggaa tgacgctcga ggagctcggc
     4981 gtgaccgacg gatttttgcc gacgcacgtg gccgtcaaag agagcgtctt cccgttcgcg
     5041 aagtttcccg gcgtcgatac cattctcgga cccgagatgc gctcgacggg cgaggtgatg
     5101 ggcatcgggc agagcttcgc gctcgcgttc gataaatcgc tcgaggcggc gggcaacacg
     5161 ctgccgtcgc gcgggcgctg cttcatcagc gtcaaggacg acgacaagga gcaggcgtgt
     5221 cacgtcgcgc gccgcctgcg caacctcggc ttcagcatcg tcgccacggg cgggacggcc
     5281 gacgcgttca cgcgcgcgcg catcccggcc gagcgcgtga acaaggtgct cgagggctca
     5341 ccgcacgtcg tggacgccat gcgcgcgggc ggcatccaga tggtcatcaa tacgacgcat
     5401 ggcgccaagg cgatcgccga cagctattcg atccggcgga acgccctgct cgcgaatatc
     5461 ccctacttca cgaccatcgc cgcggggctc gcggccgtcg atgccctcga ggtgcggcac
     5521 ctgctcacga ccgcgcaggt gcg
//
LOCUS       DATIML010000984         4319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_499976, whole genome shotgun sequence.
ACCESSION   DATIML010000984 DATIML010000000
VERSION     DATIML010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4319
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499976"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VLJ38_16995"
     CDS             <1..411
                     /locus_tag="VLJ38_16995"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU41278.1"
                     /translation="TRLEKLLSVSFTRLIAAKSVSSFKHQFQFVRKPSTEAAAELPVK
                     GKAELIFIDARHDYESVLEDFRCWSPFLAEGATIAFHDSRVCAARPDLAPSDGPVRLT
                     TEIAQGKHGPWSVVDAADSITAVRRKNDAASRPS"
     gene            530..1159
                     /locus_tag="VLJ38_17000"
     CDS             530..1159
                     /locus_tag="VLJ38_17000"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSU41279.1"
                     /translation="MHENSRLMFERHALAYFRAASRVLEIGPDGFPSAYRRSVEAGSG
                     RALAWDTLNLFRDDRLTFVASSEYSFPIESDSYDVVLSGQVIEHVRKPWVWMRELARV
                     CKAGGVVITINPVSWPYHEAPIDCWRAFPEGVRALYEEAALEVLVSEWGSLELQGFKR
                     YLPGASQEAYGRRRRLVNRVLGHFGVPVERAYDTVTVGQKSERQPRPAN"
     gene            1178..1948
                     /locus_tag="VLJ38_17005"
     CDS             1178..1948
                     /locus_tag="VLJ38_17005"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU41280.1"
                     /translation="MIPTSNMDLDAVRPLKFWLEKLTPPAATAVWRRAKRRLTPAAER
                     ELPVRTLVELFPGIADITVDLPIGQLERPPGTLPLPELLVICATTRFLKPKCVFEIGT
                     FRGASTVLLARHAPEDAIILTLDLPPHETATRFAIDNGDITGKPFTVGEYYRDSAYAT
                     KVRQLFGDSAVFDYSPYAHKVDFVFVDGNHAYDNVKVDSLNAFALLKPGGTIIWDDYH
                     PDWGVGVMRALHELRDRGLYRIAGTRFVAYVDAPASSA"
     gene            1945..3096
                     /locus_tag="VLJ38_17010"
     CDS             1945..3096
                     /locus_tag="VLJ38_17010"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU41281.1"
                     /translation="MNRARILALSNFYPPHHVGGYELGAADLLGQLAKRGHHVEVLTS
                     TRGVERPESSGTVHRWLELEYARNHTSKPHRVAYLLKRELASRRAFARACELVRPDLV
                     YAFNLKFVSISMLFAAERRGLPVHYFVSDDWLAHWEQDLWYRVRHKQRSLDLSRAEFV
                     SEYLKRDALAAGKRVEAARVIPWGLELERYLERPDEPNRCRILFAGQLAAHKGLHTVI
                     DAFGIVRERLAERAPRLSLAGRFLDADYEAKIRGAVARLGLTEHVDFLGVLPRERLAH
                     AFAEHDIFAFASVWQEPFSIVLLEAMASGLATVATATGGSPELLSDRENCLVFAKEDS
                     RACAERILELCTNTELYERVRRAGRERVRERYRLSTMVDAIERALANER"
     gene            complement(3110..>4319)
                     /locus_tag="VLJ38_17015"
     CDS             complement(3110..>4319)
                     /locus_tag="VLJ38_17015"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU41282.1"
                     /translation="EGKTLVVCPKSVVYNWLEEIRRFRPGLRTTVYHGAKRELTDDAD
                     VTLTTYATLRSDASELTARRWDVVVLDEAQAIKNSDSQTARAAFQLPGTFRVALSGTP
                     VENRLEELWSVMNFTNPGLLGKRSSFSERFVAPIAAGEAQAGERLRAKIRPFVLRRMK
                     RDVVPELPPRTDSVLHVELDPAERGVYDAVRAATKQEVTARLGHGDSVLAALEALLRL
                     RQASCHAGLVPGQSADRSSKIDRLLETLEETVADGHKALVFSQWTGLLDRVEPHLRAA
                     GIPFTRLDGSTQDRAGVVRTFQDPGGPPVMLVSLKAGGTGLNLTAADHVFLLDPWWNP
                     AVEDQAADRAHRIGQERPVNVYRMVAKDTVEERILALQTKKRSLSDVALGEANQAMAI
                     TRDELLALLD"
BASE COUNT          684 a         1436 c         1454 g          745 t
ORIGIN      
        1 actcggctcg agaagctcct cagcgtctcg ttcacgcggc tcatcgcggc caaatcggtg
       61 agctccttca agcaccaatt ccagttcgtc cgaaagccct cgacggaagc tgccgcagag
      121 ctgccggtga agggcaaggc cgagctcatc ttcatcgacg ctcgtcacga ttacgaatcc
      181 gtgctcgaag attttcgctg ttggtcgccg tttctcgccg agggagcgac gatcgcgttt
      241 cacgacagcc gcgtctgcgc cgcacgtccc gatctcgcgc cgagcgacgg tcccgtgcgc
      301 ctgacgaccg agatcgcgca gggtaaacac ggtccgtgga gcgtcgtcga cgcggcggac
      361 agcatcaccg cggtacggcg caagaacgac gccgcgtcac gcccgagctg actcgaggcg
      421 agcgctggcg ccacactcgg gcgtcagggg cgactacgtt cgacgcacgg cgagagccct
      481 cgcggatttc cctggcgact cgccgggccc ttcgagtagc gtcttcgccg tgcacgaaaa
      541 cagccgattg atgttcgagc ggcacgcgct tgcctatttt cgtgcggctt cacgcgtgct
      601 cgagattggc ccggacggct ttccgtccgc ttatcgccgt agcgtcgagg caggcagcgg
      661 ccgcgcgctc gcgtgggaca cgctcaatct gttccgcgac gaccgactca cgttcgtggc
      721 gtcgagcgag tactcgttcc cgatcgagag cgacagctac gacgtcgtgc tctcgggcca
      781 ggtgatcgaa cacgtgcgaa aaccctgggt ctggatgcgg gaactcgcac gcgtgtgcaa
      841 ggcgggcggc gtcgtcatca cgatcaatcc cgtcagctgg ccctaccacg aggcaccgat
      901 cgattgctgg cgcgcttttc ccgaaggcgt ccgggcgctg tacgaggagg cagcgctcga
      961 ggtgctcgtt tccgagtggg gttcgctcga gctccagggc ttcaagcgct acctgccggg
     1021 cgcttcccaa gaggcgtacg gccgccgccg ccgactcgtc aatcgcgtcc tcggccattt
     1081 cggggtaccg gtcgagcgcg cgtatgacac ggtcacggtg gggcagaaaa gcgagcgtca
     1141 gccacggccg gccaattagc gtgagggagt agagcgtatg ataccaacct cgaacatgga
     1201 cctggacgcg gtgcggccct tgaagttttg gttggagaag ctcactccgc cggccgccac
     1261 ggccgtctgg cgccgagcca agcgacgcct cacgccggcg gcagagcgcg agttgcccgt
     1321 gcgcacgctg gtcgagctct tcccgggtat cgccgacatc accgtggatc tgccgatcgg
     1381 ccagctcgag cgtccgccgg gcacgctgcc gctcccggag ctgctcgtga tctgcgcgac
     1441 cacacgcttt ttgaaaccca agtgcgtgtt cgagataggc acctttcgcg gcgcctcgac
     1501 cgtgttgctc gcgcggcacg cgccagagga cgccatcatc ctcacgctcg acctgccgcc
     1561 acacgaaacg gcgacgcgtt tcgcgatcga caacggtgac atcacgggca agccgttcac
     1621 cgtcggcgag tactaccgtg acagcgctta cgcgacgaag gtgcgccagc tcttcggcga
     1681 ctcggccgtg ttcgactact cgccgtacgc gcacaaggtg gatttcgtgt tcgtcgacgg
     1741 caatcacgcg tacgacaacg tgaaggtcga cagcctgaac gccttcgcgc tgctcaagcc
     1801 gggcggcacg atcatttggg acgactacca cccggattgg ggcgtgggcg tgatgcgcgc
     1861 gctgcacgag ctccgcgatc gagggctcta tcggatcgcc gggacgcgct tcgtcgccta
     1921 cgtggacgcg cccgcttcaa gcgcttgaac cgggcgcgca ttctcgcgct ttcgaacttt
     1981 tacccgccgc atcacgtggg cgggtacgag ctcggcgcgg cggatttact ggggcagctc
     2041 gccaaacgcg gccaccacgt ggaggtgctg acgagcaccc gcggcgtcga gcggcccgag
     2101 agctcgggca ccgtgcaccg ctggctcgag ctcgaatacg cgcgcaatca cacgagcaag
     2161 ccgcatcgcg tcgcgtacct cttgaagcgc gagctcgcga gccggcgtgc tttcgcgcgc
     2221 gcgtgcgagc tcgtgcggcc cgacctcgtg tacgccttca atctgaagtt cgtctcgatc
     2281 tcgatgttgt ttgcggcgga gcgccgcggc ctgccggtgc actacttcgt ctcggacgac
     2341 tggctcgcgc actgggagca ggatctctgg tatcgcgttc ggcacaaaca gcggtcgctc
     2401 gacctcagcc gcgccgagtt cgtgagcgag tacctgaagc gtgacgcgct cgcggcgggc
     2461 aagcgcgtcg aggcagcacg ggtgatccct tggggcctcg agctcgaacg gtacctagag
     2521 cgccccgacg agccgaaccg ctgccgcatc ttgttcgcgg gtcaactcgc cgcgcacaag
     2581 ggcctgcaca ccgtgatcga cgcgttcggc atcgtgcgcg agcgtctcgc cgagcgcgcg
     2641 ccgcgcctga gcctcgcggg ccgcttcctc gacgcggact acgaagccaa aattcggggc
     2701 gcggtcgcgc ggctcggcct gacggagcac gtcgatttcc tcggcgttct gccgcgcgag
     2761 cggctggccc acgcgttcgc ggagcatgac attttcgcct ttgcgtccgt gtggcaggag
     2821 ccgttcagca tcgtattgct cgaggccatg gcgagtggtc ttgccacggt ggcgacggcg
     2881 acgggcggca gccccgagct cctgtccgac cgcgaaaact gtctcgtgtt cgcgaaagag
     2941 gacagccgcg cgtgcgcgga gcgcatcctc gagctctgta cgaacacaga gctttacgag
     3001 cgcgtgcggc gcgcgggtcg cgagcgcgtg cgcgagcgct atcgactttc cacgatggtg
     3061 gacgccatcg agcgagcgct cgcgaacgag cgctgagcac ggccccccgt tagtcgagca
     3121 gcgcgagaag ctcgtcgcgc gtgatcgcca tcgcttggtt cgcctcaccg agcgccacgt
     3181 cggacagact gcgcttcttg gtttggagcg cgaggatacg ttcctcgacg gtgtctttgg
     3241 ccaccatgcg atagacgttc acgggacgct cctgtccgat gcggtgcgcg cggtcggcgg
     3301 cttggtcttc gaccgcgggg ttccaccagg gatcgagcag gaagacgtga tcggccgccg
     3361 tcaggttcaa accggtaccg cccgctttga gcgaaacgag catgacgggc gggccgcccg
     3421 gatcttgaaa ggtgcggacc acgccggcgc gatcctgggt cgagccgtcg aggcgcgtga
     3481 aggggatgcc agcggctcgg aggtgcggtt cgacccgatc gagcaggccc gtccactggg
     3541 aaaagacgag cgccttgtgc ccgtctgcga ccgtctcttc caaggtctcg agcaggcggt
     3601 cgatcttgga cgagcgatcc gcgctttgcc ccgggacgag accggcgtga cacgaggctt
     3661 ggcgcaagcg caagagcgct tcgagcgccg cgaggacgct gtcgccgtga ccgaggcgag
     3721 cggtgacctc ctgtttggtc gcggcgcgca cggcgtcgta cacgccgcgc tcggccggat
     3781 cgagctcgac gtgcagcacg ctgtcggtgc gcggcggcag ctccggcacg acgtcgcgct
     3841 tcatgcgccg gagcacgaac ggccggatct tcgcgcgcag ccgctctccc gcttgcgctt
     3901 ccccggcggc gatgggcgcg acgaagcgct cggagaaact gctgcgcttg ccgagtaagc
     3961 ccgggttcgt gaagttcatc acgctccaga gctcctcgag ccgattttcg acgggggtgc
     4021 cgctcagcgc gacccggaac gtgcccggga gttggaacgc cgcacgggcg gtttggctgt
     4081 cggagttctt gatcgcttgc gcttcgtcga gcacgaccac gtcccagcgc cgcgccgtga
     4141 gctcgctcgc atcggacctc agcgtggcgt aggtcgtgag cgtcacgtct gcgtcgtcgg
     4201 tgagctcgcg tttggcgccg tgatacacgg tcgtgcgcag gcccggccga aaccggcgaa
     4261 tttcctcgag ccagttgtag acgacgctct tcggacacac gacgagcgtc ttgccctcg
//
LOCUS       DATIML010000985         2601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1657090, whole genome shotgun sequence.
ACCESSION   DATIML010000985 DATIML010000000
VERSION     DATIML010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1657090"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2056)
                     /locus_tag="VLJ38_17020"
     CDS             complement(<1..2056)
                     /locus_tag="VLJ38_17020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU41283.1"
                     /translation="MPNSDTDLFAQLVDSAPDALILVAQDGVIRLVNRRAEELFGYER
                     SELLGQPIELLVPESFRATHGGHREGYLLAPKRRPMGSELELFGRRKDGREFSVEISL
                     SPIAAAEGTLVAAAIRDVGLRKRAEQRFRALLESAPDAMVIVDREGRIVLVNAQTERL
                     FGYPRAELLGEAVEKLVPKRLRGVHVAHRNGYMQEPKSRNMGSGLELYGLRKNGSEFP
                     VEISLSPLESEERGWISSSIRDISDRRQAEASARLATDRLLSAVESIQDGVALYDARD
                     EVVLCNSTCRQLLASVVEGPIVGKKHADVIAAVVEGALFDLAGESPAAFRARVAEYHK
                     NPIGNLDFKTRDGHVLRMTDRRTLEGGIVSTLWDVTEDMKLVAERERAQKLAEDASAA
                     KSEFLSSMSHELRTPLNSILGFAQLLQIDKKSPLNERQKEKLEHVLKGGEHLLRLIDD
                     ILDLSHIEAGRIMVSPEPVAVSDVLAEVKNALDPMAERAGITLRCEETRERVVADRTR
                     FAQILINFGSNAIKYGKPGGHAVLSVTHPRPGNVRVTIADDGMGIPLDKQDRLFQPFQ
                     RAGQEAGPIQGTGIGLAITKRLAELLQGSVGFHSTPGVGSEFWVELPRHEEGTRELDE
                     TAATRATESLLSGVDGRRYTIVYVEDNPSNIAFMQELIAELERVSLVTAPTAEVGIEL
                     VRA"
     gene            complement(2046..>2601)
                     /locus_tag="VLJ38_17025"
     CDS             complement(2046..>2601)
                     /locus_tag="VLJ38_17025"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU41284.1"
                     /translation="PVEAIRQEVRSLMRLIMNLLDISKSEEGRLTPAAAGVDLAALVA
                     EAFDAMEVAAKAKNITFEQELDVTRLRGDADLLRRVLENLLDNALRHAPEDSSIRVTS
                     RLCDGSVELRVADQGAGVPESMRERVFDPFVQVESKDRSVTRSGRGLGLTFCRLAVEA
                     HGGRMRVENGNPGAVFCLSLPHAE"
BASE COUNT          399 a          848 c          885 g          469 t
ORIGIN      
        1 gcgcgcgcac gagctcgatg ccgacctcgg ccgtgggcgc cgtgacgaga ctcacgcgct
       61 cgagctcggc gatgagctct tgcatgaacg cgatgttcga cgggttgtcc tcgacgtaga
      121 cgatcgtgta acggcggcca tcgacgccgc tgaggagcga ctcggtggcg cgagtcgctg
      181 cggtttcgtc gagctcgcgc gtgccttcct cgtgcctggg cagctcgacc caaaactccg
      241 agcccacgcc gggcgtgctg tgaaagccca cgcttccctg taaaagctcg gccaaacgct
      301 tggtgatcgc cagtccgatg cccgtgccct ggatcggtcc tgcctcttgg cccgcgcgct
      361 ggaacggctg gaacaagcga tcctgcttgt cgagcgggat gcccatgccg tcatcggcga
      421 tcgtgacgcg tacgttgccg ggccgcgggt gcgtgacgga gagaacggcg tgtcccccgg
      481 gcttgccgta cttgatcgcg ttcgagccga agttgatgag gatctgagcg aagcgcgtgc
      541 gatcggccac gacgcgctcg cgggtttctt cgcagcggag cgtgatgccc gcgcgttccg
      601 ccatgggatc gagcgcgttc ttcacttcgg cgagcacgtc ggacacggcg acgggctcgg
      661 gcgagaccat gatgcgaccg gcctcgatgt gcgacaagtc gagaatatcg tcgatcagcc
      721 gcaagaggtg ctcgccgccc ttcaagacgt gctcgagctt ttccttctgc cgctcgttga
      781 gcggcgactt cttgtcgatc tgcaagagct gggcaaagcc caggatcgaa ttgagcggtg
      841 tgcggagctc gtggctcatc gacgacaaga actcggactt ggcggcgctc gcgtcttcgg
      901 cgagcttctg cgcgcgctcg cgttcggcga cgagcttcat gtcttcggtc acgtcccaca
      961 gggtgctcac gatgccgccc tcgagcgtgc gtcggtcggt catgcgcagc acgtgaccgt
     1021 cgcgcgtctt gaaatcgagg ttgccgatgg gatttttgtg atattcggcg acgcgcgcgc
     1081 ggaacgccgc gggtgactcg cccgcgagat cgaacagcgc gccctcgacg acggccgcga
     1141 tgacgtccgc gtgcttcttg ccgacgatgg gtccttccac gacgctcgcg aggagttgcc
     1201 ggcacgtgct gttgcaaagc acgacctcgt cgcgtgcgtc gtagagcgcc acgccgtcct
     1261 ggatactctc gaccgccgag agcagccgat cggtcgcgag ccgcgcgctc gcctcggctt
     1321 gccggcggtc gctgatgtcg cggatcgagc tcgagatcca gccacgctcc tcggactcga
     1381 gtgggctcag gctgatttcg acggggaact ccgagccgtt cttgcgtaag ccgtagagct
     1441 cgagtccgga gcccatgttg cggctcttcg gttcctgcat gtagccgttg cggtgggcga
     1501 cgtgaacgcc gcgcagccgt ttcggcacga gcttctccac cgcttccccg aggagctcgg
     1561 cgcgcgggta gccgaataga cgctcggttt gcgcgttgac gagcacgatg cggccctcgc
     1621 ggtcgacgat caccatcgcg tcgggtgcgg actcgagcag cgcgcgaaag cgttgttcgg
     1681 cgcgcttgcg caggccgaca tcgcgaatcg cggccgcgac gagcgtgccc tccgccgcgg
     1741 cgatcggact gagactgatc tcgacggaga attcgcggcc gtccttgcgc cgtccgaaga
     1801 gctcgagctc cgagcccatg gggcggcgtt tcggcgccag caagtagccc tcgcgatggc
     1861 cgccgtgcgt ggcgcgaaag ctttcgggga cgagcagctc gatcggctgt cccaagagct
     1921 cactgcgctc gtagccgaag agctcctccg cacgccggtt gacgagccga atcacgccgt
     1981 cctgagccac gaggatcagt gcgtcgggcg ccgagtcgac gagctgcgcg aatagatcgg
     2041 tgtcgctatt cggcatgcgg gagactcaag cagaacacgg cgccgggatt gccgttttcc
     2101 acgcgcatgc ggccgccatg cgcctcgacg gcgaggcggc aaaatgtgag cccgaggccg
     2161 cgccccgagc gcgtgaccga acgatccttg ctctcgacct gcacgaacgg atcgaagacg
     2221 cgctcgcgca tcgactcggg cacgccggcg ccctggtcgg cgactcggag ctcgacgctg
     2281 ccgtcgcaga gccggctcgt cacgcggatg ctcgagtctt cgggcgcgtg gcggagcgcg
     2341 ttgtcgagca gattttcgag cactcggcgc aacaggtcag cgtcgccgcg caagcgcgtc
     2401 acgtcgagct cttgctcgaa cgtgatgttc ttggccttgg cggcgacctc catcgcgtcg
     2461 aatgcttcgg cgaccagcgc cgcgaggtcc acgccagcgg cagccggtgt gagccgtccc
     2521 tcttcgctct tgctgatatc gagcaggttc atgatgagtc gcatgagcga gcgcacttcc
     2581 tgccggatcg cttcgaccgg g
//
LOCUS       DATIML010000986         1620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5699262, whole genome shotgun sequence.
ACCESSION   DATIML010000986 DATIML010000000
VERSION     DATIML010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5699262"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..770)
                     /locus_tag="VLJ38_17030"
     CDS             complement(<1..770)
                     /locus_tag="VLJ38_17030"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HSU41285.1"
                     /translation="MYVHARTLGWLVRRALFRKPFSFRRCFYAAGFGFAQVTLGPVVA
                     LARAFDRLAYPEFSALPVPAPLFVIATPRSGTTYLHHLLELDEERFFSCKLYQTILPS
                     IALDRALHGAAELDASTGRLFGRLTEAIDSRMFTDWEAIHRVSLRSAEEDENLFVSSL
                     TSPALYLLFPFIRELPEFVEISRLGGRAVRRVTEDYRETVRRWSYLEGNERTPLIKNV
                     LLPSRLIVSDRAFPAARYVHVVRDPREAIPSAVSMFYA"
     gene            1055..>1620
                     /locus_tag="VLJ38_17035"
     CDS             1055..>1620
                     /locus_tag="VLJ38_17035"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU41286.1"
                     /translation="MALASSGYAECLLLERKSLPRTKACGSGLSPWTLTYLDRLGVGA
                     EVRKRAFRIDGAVIAGADGEGVELRGDHETAILLRSEFDELLAREAERRGARLQEGCT
                     VRRIDSQNGQVAVETNTGTFEADVVVDCTGATGGFDRERRHTDSSAGGTTLHTIMAWY
                     EGMEGCSDVVELFFDRELKPHYGWVFPET"
BASE COUNT          315 a          477 c          590 g          238 t
ORIGIN      
        1 atggcgtaga acatgctgac ggccgacggg atggcttcgc gcgggtcgcg cacgacgtgc
       61 acgtaacgcg ccgccgggaa cgcgcgatca gacacgatga ggcggctcgg caagaggacg
      121 ttcttgatga gcggcgtgcg ctcgttaccc tcgaggtagc tccagcgcct gaccgtctcg
      181 cgatagtctt cggtgacgcg ccgaacggcg cggccaccga gacgactgat ttcgacgaac
      241 tcgggcagct cgcggatgaa ggggaacaag aggtagagcg ccgggctcgt gaggctcgaa
      301 acgaacaggt tttcgtcctc ctcggccgag cgcaagctca cgcgatggat cgcttcccaa
      361 tcggtgaaca tgcggctgtc gatcgcctca gtgaggcggc cgaagaggcg gccggtgctc
      421 gcgtcgagct ccgcagcgcc gtgaagcgcg cgatcgagcg cgatggacgg caagatcgtc
      481 tggtagagct tgcagctgaa gaaccgctcc tcgtcgagct cgagcaggtg gtgcaagtac
      541 gtcgtgcccg agcgcggggt cgcgattaca aacagcggtg ctggaacggg cagcgcgctg
      601 aactccggat aggcgagacg atcgaaagcg cgagcgagcg cgacgacggg gccgagcgtg
      661 acctgtgcga agccaaaccc ggcggcatag aagcagcgtc ggaagctgaa gggcttgcga
      721 aagagcgctc gacggacgag ccagcccagg gtgcgcgcgt gcacgtacat ggcaaagctt
      781 gccggctagg gagcgcggcg caggcgcgca cgctccggac ggacggacct tgggcggagc
      841 aaatgtcgcc cgttgcttga gtaggtgtcg cgcacgaatg cctcgcggga gtaaagggag
      901 tgaaaccgag ttttgctagc aaccagagcg aaaccgtgag acatagcgcg acagcagtag
      961 tttctccgca gccgcgatga gggtttagat cgcagtgagc agaaagagaa aggcaatcgt
     1021 cgtcggtgcc gggccttccg gctcagcggc cgccatggcg ctcgccagtt ccgggtacgc
     1081 agaatgcctg ctcttggagc ggaagtcgct cccgcgaacg aaggcgtgcg gcagcggact
     1141 gtcgccttgg acgctcacct acctcgaccg gctgggggtc ggcgccgagg tgagaaagcg
     1201 cgcgttccgc atcgacggcg ccgtcatcgc cggtgccgac ggcgaaggcg tggagctgcg
     1261 cggcgatcac gaaacggcca ttttgctgcg gagcgaattc gacgagctgc tcgcgcgcga
     1321 agcagagcgg cgtggggcac ggcttcagga gggttgcacc gtccggcgca tcgacagcca
     1381 aaacgggcag gtcgccgtcg aaacgaacac cggcacgttc gaagccgacg tggtcgtcga
     1441 ctgcacgggc gcgaccggcg gtttcgatcg cgagcgacgg cacaccgact cgtcggccgg
     1501 cggcacgacc ctgcacacca tcatggcttg gtacgagggc atggagggct gctcggacgt
     1561 ggtggagctg ttcttcgacc gggagctgaa gccgcactat ggctgggtct tccccgagac
//
LOCUS       DATIML010000987         3330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5699600, whole genome shotgun sequence.
ACCESSION   DATIML010000987 DATIML010000000
VERSION     DATIML010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5699600"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1796
                     /locus_tag="VLJ38_17040"
     CDS             <1..1796
                     /locus_tag="VLJ38_17040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41287.1"
                     /translation="KGEIAVRGVRLGVLSAVLAAACGGGGGVSGSVFASGWQSDAGES
                     IARVEQKLRGAPRPPDVAVVVGVTPDGLVGSTLPSGSVWRRAGVVDAVPSVAPDGVVM
                     ATGGGRAFALDGKSGQPLWSVSVAPFVLRGAADDGHYSVLSLGKPRLSQSRLMVVDRS
                     GRVLVDTASDTELGRPAIRAGVAFVPWGGQYVSAIDVTTGSEIGRLLTRELPSHALDI
                     QGNLYFGQYALVRLDPHIKYAESFQATHYTFKPRELPGNPVWLGNGLDLPLVDTTARA
                     KIRLFAAPTSDDKGITIAGNSYAGTYFRALYGFALSDGHLLWADALAADAVGGGPAAS
                     GFVFCDETGKVHLYANDGGTGAVADLGQKLVACAVGASALRVEGGVSRGSLAQQIEES
                     FRRFDPDMASAEALLIKELGKLDDAEVTRILIEFAEDARIPPAQRESARKLLAKRKNG
                     SEFMLAALEHHYDFVTGDQAPPVGPLADALAGLHDARASGPLARHLNDPANSIDDVVR
                     AARALEVLATSAEARDLATFFALYRATADDPALVDAVLSVASALVRVGGSDGRALVER
                     ASADPFTQPDVGRGLAKLVAPKPAAAAAVKP"
     gene            1861..2835
                     /gene="tal"
                     /locus_tag="VLJ38_17045"
     CDS             1861..2835
                     /gene="tal"
                     /locus_tag="VLJ38_17045"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF009001.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HSU41288.1"
                     /translation="MTQLDSLKKFTTVVADSGDIEALAKYKPQDATTNPSLLLKAAQV
                     PKYKHLVDEAIRYAASQNGDKHARTTAFMDKLAVNFGCEILKIVPGRVSTEVDATLSF
                     DTEASIAKARGLVGLYEKAGVPRERILIKLGTTWEGIRAAERLEQEGIHTNMTLLFSF
                     AQAVACAEAKVTLISPFVGRIYDWYKKSKGVNDIPIAEDPGVTSVERIYTYYKKYDYK
                     TQVMGASFRKVEQVIALAGCDLLTISPDLLEQLNAAPGELERRLSPEKAKAANVERVH
                     MDEKTFRWLHNEDAMGTDKLSEGIRVFNVDGRKLEAFAAAELAKASAA"
     gene            complement(2866..>3330)
                     /locus_tag="VLJ38_17050"
     CDS             complement(2866..>3330)
                     /locus_tag="VLJ38_17050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41289.1"
                     /translation="LSGGAAAGTYPRLDYYYTGGFADTPPLDALRTGVRQTGFVLRGY
                     KPLQFSGTNYNLLNVEYRFPIAYIDRGLSTLPGFLRTLSGAAFLDWGGAYNELDLRDP
                     WKSYHVGVGGELRVDFSLVYSDDTQLRIGLARGLDSKAPPGVQSYFVFAAGF"
BASE COUNT          562 a         1088 c         1146 g          534 t
ORIGIN      
        1 ggaaaggcga aatagccgtg cgaggcgtgc gactaggggt tttgagtgca gtgctcgcgg
       61 ccgcctgcgg cggcggaggc ggcgtttcgg gcagtgtgtt cgcgtccggt tggcagagcg
      121 acgcgggtga gtcgatcgcg cgcgtggagc agaagctcag gggcgccccg aggccgcccg
      181 acgtcgcggt cgtcgtcggt gtgactccgg acgggctcgt cggttcgacg ttgccgtcag
      241 gcagtgtgtg gcggcgcgcc ggcgtggtcg acgccgtgcc gagtgtcgcg ccggacggcg
      301 tggtgatggc gacgggcggc gggcgtgcct tcgcgctcga cggcaagagc ggtcagccgc
      361 tttggagtgt gtcggtcgcg ccgttcgtgc tgcgcggcgc cgccgacgac ggccattaca
      421 gcgtactttc gctcggcaag ccgcgcttga gccagagccg gctcatggtc gtggatcgct
      481 cgggacgcgt gctcgtcgat acggcttcgg acaccgagct cgggcgtccg gcgattcgcg
      541 cgggcgtcgc gttcgtgccc tggggcggcc aatacgtctc cgcgattgac gtgacgaccg
      601 gcagcgaaat cgggcgcctg ctcacgcgcg agctcccgag ccacgcgctc gacatccagg
      661 gcaacctcta cttcggccag tacgcgctcg tgcgcctcga tccgcacatc aagtacgccg
      721 agtctttcca ggccacgcac tacaccttca aaccgcgtga gctccccggc aatcccgtgt
      781 ggctcggtaa cggtctcgac ctgccgctcg tcgacacgac ggcgcgcgcg aagattcgcc
      841 tattcgccgc gccgacctcg gacgacaagg gcatcaccat cgcgggcaat tcgtacgcgg
      901 gcacgtactt tcgcgcgctt tacggcttcg cgctcagtga cgggcacctc ttgtgggccg
      961 acgcgctcgc ggccgacgcc gtcggcggag gacccgcggc gtccggcttc gttttctgcg
     1021 acgaaaccgg caaggtgcac ctctacgcga acgacggggg cacgggcgcc gtcgccgacc
     1081 tcgggcagaa gctcgtcgcc tgtgcggtcg gcgcgtcggc gctgcgcgtc gaaggtggcg
     1141 tgtcacgcgg ctcgctcgct cagcagatcg aagagagctt tcgtcgtttc gatcccgaca
     1201 tggcctcggc ggaggcgctt ctgatcaagg agctcggcaa gctcgacgat gccgaagtga
     1261 cgcgcatctt gatcgagttc gccgaggatg cacgcattcc gcccgcgcag cgcgagagcg
     1321 cgcggaagct gctcgccaag cgcaagaacg gttcggagtt catgctggcg gcgctcgagc
     1381 accactacga tttcgtcacg ggggatcagg cgccgcccgt cggtccgctc gctgacgcgc
     1441 tcgcgggcct tcacgacgcg cgcgcgtcgg gcccgctcgc acggcatttg aacgatcccg
     1501 cgaattccat cgacgacgtg gtccgcgctg cgcgtgcgct cgaggtgctg gccacgagcg
     1561 cggaagcgcg cgatctcgcg acgttcttcg cgctttaccg cgcgactgcc gacgatccgg
     1621 cgctggtcga tgcggtgctt tccgtcgcat ccgcgctcgt gcgcgtcggt ggctcggacg
     1681 ggcgggcgct cgtcgagcga gcttcggccg atccctttac ccagccggac gtggggcgcg
     1741 gcctcgcaaa attggtggcg ccgaaaccgg cggccgccgc tgctgtaaaa ccctgactct
     1801 cgcttgcgcg ggccgcgcgc ggggggcagg atgacgaaac aataattttc ggaggatgcg
     1861 atgacgcagc tcgactcgct caagaagttc acgaccgtgg tcgccgatag cggcgacatc
     1921 gaagcgctgg ccaaatacaa gccgcaggat gcgacgacca atccgtcgct gctgctcaag
     1981 gccgcccagg tgcccaaata caagcacttg gtcgacgaag cgattcgcta cgccgcgagc
     2041 cagaacggcg acaagcacgc gcgcacgacc gcgttcatgg acaagcttgc ggtgaacttc
     2101 ggctgcgaga tcctgaagat cgttcccggt cgcgtctcga ccgaggtgga cgcgacgctc
     2161 agcttcgaca cggaggcgag catcgccaag gcgcgtggtc tcgtcggcct ctacgaaaag
     2221 gcgggcgtcc cgcgcgagcg catcttgatt aagctcggca ccacctggga gggcattcgc
     2281 gccgctgaac gcctcgagca agagggcatc cacacgaaca tgacgctgct cttcagcttc
     2341 gcccaagcag tcgcctgcgc cgaagccaag gtgacgttga tctccccgtt cgtcggtcgc
     2401 atctacgact ggtacaagaa gtcgaagggc gtgaacgaca tcccgatcgc cgaagatccc
     2461 ggcgtcacga gcgtcgagcg catctacacc tattacaaga agtacgatta caagacgcag
     2521 gtgatgggcg cgagcttccg caaggtggag caggtgatcg cgctcgcagg ttgcgatctt
     2581 ttgacgatca gccccgatct gctcgagcag ttgaacgccg cgccgggtga gctcgagcgc
     2641 cggctcagcc ccgaaaaggc caaggccgcg aacgtcgagc gcgtccacat ggacgaaaag
     2701 acgttccgct ggctccataa cgaagacgcg atgggcaccg acaagctctc cgaaggcatt
     2761 cgcgtgttca acgtcgacgg ccgcaagctc gaggcgttcg ctgcagccga gctcgccaaa
     2821 gcgagcgccg cctagccgtc gaccgtcgct cgcgcagagc ggccgtcaaa agccggccgc
     2881 gaacacgaaa taactctgca cgccgggcgg cgccttcgag tcgagcccgc gggcgagccc
     2941 gatgcgaagc tgcgtgtcgt cgctgtacac gagcgagaaa tcgacgcgga gctcgccgcc
     3001 gacaccgacg tggtacgact tccatgggtc gcgcaagtcg agctcgttgt aggcgccgcc
     3061 ccagtcgagg aaggcggcgc cgctcagcgt gcgtagaaag ccgggcagcg tgctcaagcc
     3121 gcggtcgatg tacgcgatcg ggaagcggta ctcgacgttc agcaagttgt agttcgtgcc
     3181 cgagaactgc agcggtttat agccgcgcag cacgaagccg gtctggcgca cgccggtcct
     3241 gagcgcatcg agcggcggcg tgtcggcgaa gccgcccgtg taatagtagt cgagccgcgg
     3301 gtaggtgccg gcggccgcgc cgcccgagag
//
LOCUS       DATIML010000988         2740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1078544, whole genome shotgun sequence.
ACCESSION   DATIML010000988 DATIML010000000
VERSION     DATIML010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1078544"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..721)
                     /locus_tag="VLJ38_17055"
     CDS             complement(155..721)
                     /locus_tag="VLJ38_17055"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41290.1"
                     /translation="MGDPALEQADAQLVLRMARGDRAALSALYARHAPRLLALVIQIL
                     HDRPEAEDVLHDVFLEAWQKAATYSTERGSVGAWLSLRARSRAIDRRRSAPRKRSVPL
                     DSAGIDQPTDPSVDPARIRDHRRLGKAFAAMTADEQRVIELGYFEGLSSSEIADHIGA
                     PIGTVKSRTRSALQKLRAALGEVKHGDG"
     gene            complement(714..1904)
                     /locus_tag="VLJ38_17060"
     CDS             complement(714..1904)
                     /locus_tag="VLJ38_17060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSU41291.1"
                     /translation="MTLDRAAIDRTVDELSERLIDLSRRIHEHPELSYDERRASGWIT
                     EFVESVTQGPIERGTGGMETAFRARAGANSGPRIAVLAEYDALPEIGHACGHNLIAGA
                     AVGAFLALARQAPALLGSIELVGTPAEEGGGGKIRLLEAGVFEGVDAAMMFHPFDRDV
                     IAHPALSTMRVQAAFHGAPAHAAFAPWDGRSALAACLDTFRLIDGQRVHFRDGVRVYG
                     IVTNGGQAANIIVEDAACEFTLRAPTTAGLTPVVETVERCMRAAALASNVEVSIHRET
                     GYHEMLNNMTLVRRFSAALTALGRSPRETDPTVGAASTDMGDVSLALPAIHPWLAICD
                     EGETLCHERAFAACAKSARGFETMLVAAKAMAHTAADLLEDPGLVEQARAEHRAARAR
                     SLHG"
     gene            2173..>2740
                     /locus_tag="VLJ38_17065"
     CDS             2173..>2740
                     /locus_tag="VLJ38_17065"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HSU41292.1"
                     /translation="MSASATPATPPAEPRKVEAHEAAMGTNVTFIAYTNARVDETATA
                     AAIARSLAEMQRLEALLSEWRDDSEVGRVNAQAGSWVTVGPETLGVIQKGLWAGKVSG
                     GVFDITFQAMSGLWKFGSAQEKHPKLPTPAAVAAAKKHVDYRRVEVSEAEHQVRLGKD
                     QKIGLGGIAKGYIVDRAAHVLRDAGLDSF"
BASE COUNT          440 a          918 c          968 g          414 t
ORIGIN      
        1 gcggagcggc gcttgcgaca cctcgatcat cagccgctcg agcgagcccg ccgggacgga
       61 agcgggctcc aagagctccg tcaattggcc gagcggcgcc gcgagttccg gctcctcggc
      121 cagaacgtca gcggcgaatt cgggaagctt gtcgtcagcc atcgccatgc ttcacctcgc
      181 cgagggcggc gcgcagcttc tgcaaggcac tgcgcgtccg cgatttgacc gtaccgatcg
      241 gtgcgccgat gtggtcggcg atttcactgc tgctcaggcc ttcgaagtac ccgagctcga
      301 tgacacgctg ctcgtcggcg gtcatcgcgg cgaaggcttt gcctagtctt cgatgatctc
      361 gaatacgtgc cggatccacg gacggatcgg tcggctgatc gattcccgcg ctgtccagcg
      421 gcactgaacg cttgcggggt gccgagcggc gccggtcgat cgctcggctg cgcgcccgaa
      481 gcgacaacca cgcgccgacg ctgccgcgtt cggtcgagta cgtcgccgcc ttttgccaag
      541 cctcgagaaa tacgtcgtgg agcacgtcct cggcctctgg acgatcgtgc aggatttgga
      601 tgacgagcgc caacagccgc ggcgcgtgac gcgcatacag cgccgagagc gcggcgcgat
      661 ccccgcgcgc catgcgaagg acgagctggg cgtccgcctg ctcgagcgcg ggatcaccca
      721 tggagggagc gggcgcgggc cgcgcggtgc tccgcgcgcg cctgctcgac gagtcccgga
      781 tcctcgagca gatcggcggc ggtgtgagcc atcgctttgg cggcgacgag catggtctcg
      841 aacccgcgcg cgctcttggc gcacgcagcg aacgcgcgct cgtgacagag cgtctcacct
      901 tcgtcgcaga tcgcgagcca gggatgaatc gccgggagcg cgaggctcac gtcgcccatg
      961 tcggtcgaag ccgcgccgac ggtcgggtct gtctcgcgcg gcgagcgacc gagcgcggtg
     1021 agcgcggccg agaagcggcg cacgagcgtc atgttgttga gcatctcgtg gtagcccgtt
     1081 tcgcggtgga tgctgacctc cacgttcgag gcgagcgcgg cggcgcgcat gcaacgttcg
     1141 acggtctcga cgacgggggt gaggcccgcg gtcgtgggcg cgcgcagcgt gaactcgcag
     1201 gcggcgtctt cgacgatgat gttcgccgcc tggccgccgt tcgtgacgat gccgtagacg
     1261 cgcacgccgt cgcggaagtg cacgcgttgg ccgtcgatga gccggaacgt gtcgaggcag
     1321 gccgcaagcg cgctccggcc gtcccacggc gcgaacgccg cgtgcgcggg cgcgccgtga
     1381 aacgccgcct gcacgcgcat ggtcgagagc gcgggatgcg cgatgacgtc gcgatcgaac
     1441 gggtggaaca tcatcgccgc gtcgacacct tcgaacacgc ccgcctcgag tagacggatc
     1501 ttgccgccgc ccccttcctc ggccggagtg ccgacgagct cgatcgaacc gagaagcgcg
     1561 ggcgcttggc gggcgagcgc gagaaaagca cccacggccg ccccggcgat gaggttatga
     1621 ccgcaggcgt ggccgatttc gggtagcgcg tcgtattccg cgagcacggc gatgcgcggc
     1681 cccgagttcg cgccggcccg cgcgcggaac gccgtctcca tgccgcccgt gccgcgttcg
     1741 atgggaccct gggtgacgga ctcgacgaat tcggtgatcc aaccgctcgc gcgccgctcg
     1801 tcataggaga gctcggggtg ctcgtggatg cgccgagaca ggtcgatcag gcgctcgctg
     1861 agctcgtcga cagtgcgatc gatggcggcg cggtcgagcg tcatgccggc taccatacac
     1921 cgcagggcag cggccggtct cgggtgtagg cgttcatgcg gccccgtgtc ataaccgtgc
     1981 tcacacgtca tcgtgctcac ttctttaacg cggaaagtgg ccttggccgt gctcggactc
     2041 agtgccttgc tgacccgttg cgccaacggc ggagcaccga cgactggccc gtcacgatcc
     2101 cggccgcccg ctgaagctgg tgcggcgccg ccgcttgcgt cggcgggcgt ccccccaagc
     2161 cccgccgctg cagtgagcgc cagcgcgaca ccggcgacgc cgcccgccga gccgcgcaag
     2221 gtcgaagcgc acgaagccgc gatgggcacg aacgtcacgt tcatcgccta cacgaacgct
     2281 cgcgtggacg aaaccgcgac ggccgccgcc atcgcgcgtt cactcgcgga aatgcagaga
     2341 ctcgaagcgc tgctcagcga atggcgcgat gacagcgaag ttggccgcgt caacgcgcag
     2401 gccggctcct gggtcacggt cggacccgaa accctcgggg tgattcagaa gggactctgg
     2461 gctgggaaag tctcgggcgg cgtcttcgac atcaccttcc aagcgatgag cggcctctgg
     2521 aagttcggca gcgcgcagga gaagcatccg aagctgccga cgccggcggc ggtcgcggcg
     2581 gcaaaaaaac acgtcgacta tcggcgcgtc gaggtgtcgg aagcggagca tcaggttcgg
     2641 ctcggcaaag atcaaaagat cggcctcggc gggatcgcca agggctacat cgtcgatcgc
     2701 gcggcgcacg tgctgcgcga cgcgggactc gattcattct
//
LOCUS       DATIML010000989         3986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3099527, whole genome shotgun sequence.
ACCESSION   DATIML010000989 DATIML010000000
VERSION     DATIML010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3986
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3099527"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="VLJ38_17070"
     CDS             complement(<1..785)
                     /locus_tag="VLJ38_17070"
                     /inference="COORDINATES: protein motif:HMM:NF025597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4339 domain-containing protein"
                     /protein_id="HSU41293.1"
                     /translation="MAAAAAPGFPELEDAEEDDATRIVKGGALADAFGALVGGAAGGA
                     QELGMPADEWFVGINDVPVGPIRLGEIRKRAVLGAVTLDSMVWRDGLEAWRPLKTFPE
                     LVAVLEESMSSVRASGAPLTVPPLGRNDDAFSSPGASSGTTGVGVVTDDSAAGLPRAR
                     SPVIAWLAIFVALGFGLTIGFVLWSKQKPPETIVKYVEVPAKPTATAVTAAQDPQANE
                     ATGPAATGTSSKPHTKSTGSAKTADTAADKGGGLTGLRGLSALG"
     gene            874..1017
                     /locus_tag="VLJ38_17075"
     CDS             874..1017
                     /locus_tag="VLJ38_17075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41294.1"
                     /translation="MGDDFALTAGAAAPELEGGAGAGAFAVAAAGAPGFGTGALVEER
                     GAD"
     gene            1048..1434
                     /locus_tag="VLJ38_17080"
     CDS             1048..1434
                     /locus_tag="VLJ38_17080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41295.1"
                     /translation="MGFTADLLGVSGAGDAPGADGGFGNPFKSVSVGRRAESALGAFG
                     AVATRPGVAAGFGGTAPRDAAPVLLGGLAASGALLGRASGAAVRVSGDVVVDRALGTA
                     GAFGTTGGGASQSASSGGLVSGAGGI"
     gene            complement(1577..3076)
                     /locus_tag="VLJ38_17085"
     CDS             complement(1577..3076)
                     /locus_tag="VLJ38_17085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41296.1"
                     /translation="MTDRKQIGKILLRQRALTPDQLERALSEKKGGRLASRLAAEGTI
                     TDLSALKALSEQHGIPGIDLGQICLRLETLDLLPREIAEKHLILPVLMRDDRLFVATA
                     NPREHKVLDELEFVTNKRVYPYVALESSLASVIDDAYGRKARGEAFFVGAQCPQEMLD
                     KLGIDRHGQPLDPERDGGEPDSQRVLHGPGVVVDDDVGRASQSDDIEEGDFDALQRED
                     SVVEPIPEEKLRESSVPPAPAGAKTILIVDDELEIRKMLARLLARAGYRVLETDRGVT
                     ALRIVKEQTPDLIVLDAMLPEVHGFDVARRIKGSRRYGAIPIVMVSAVYRGWRYAEDL
                     RTTLGVDDFIEKPFTLQDVLSRVQALLGGKLPSKQPPQDAAAVTQAAVDVESALAEGI
                     AAYRAGRLDEAIEHLRRGVAIDPLAFRLRFQLGLLYGRRGQVFDAVTELETAVSVNPQ
                     HFPAVKNLAILYQKAGFRNKAVETWERALALAPDDATRLSIREHLLRLL"
     gene            complement(3085..>3986)
                     /gene="tgt"
                     /locus_tag="VLJ38_17090"
     CDS             complement(3085..>3986)
                     /gene="tgt"
                     /locus_tag="VLJ38_17090"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HSU41297.1"
                     /translation="LQGFSRFRGAVVTDSGGFQAFSLAERVVLREEGVEFSSHLDGRR
                     LLLSPEEAMRVQGLLGSDVAMQLDVCPPGGAPRPEVEAAVARTTRWAERCLAAANSGQ
                     AVFGIVQGGVDVELRLAHLEALAKLPFAGLALGGFSVGEPNELMHRTLVEVAPKLDPE
                     RPRYLMGVGTPADLVRGIRTGIDIFDCVIPTRNARNGQAFTRTGRISIRNARYREDSA
                     PLDAECRCPTCAGGYSRAYLRHLHIAREMTAARLLTLHNVAFYVELVTAARRAIERGT
                     YDEWAKARLSALESRDSDEAFGR"
BASE COUNT          600 a         1331 c         1397 g          658 t
ORIGIN      
        1 ccgagcgcgc tcaggccacg gaggcccgtg aggcctccac ccttgtcggc cgccgtgtcc
       61 gcggtcttgg ctgagcccgt ggacttggtg tgaggcttgg agctcgtgcc cgtggcggct
      121 ggaccggtcg cttcgtttgc ctgcggatcc tgcgcggcgg tgaccgcagt ggccgtgggt
      181 ttggccggca cctcgacgta cttcacgatg gtctcgggcg gcttctgctt gctccagagt
      241 acgaagccga tcgtgaggcc gaagccaagc gctacgaaga tcgcgagcca cgcgatgacg
      301 ggtgagcgag cgcgcggtaa gcccgccgcg gaatcgtcgg taacgacgcc gactccggtc
      361 gtcccggagg acgcgccggg tgaagaaaac gcgtcgtcat tgcgcccgag cggcgggacg
      421 gtgagcggcg cgccggaagc acgcacgctc gacatgctct cttcgagcac ggcgaccagt
      481 tcggggaacg tcttgagcgg acgccacgcc tccaggccgt cccgccacac catcgagtcg
      541 agcgtgaccg cgccgagcac cgcgcgtttt cggatctcgc cgagccggat gggcccaacc
      601 ggcacgtcgt tgatgccgac gaaccactcg tcggccggca taccgagctc ttgcgcgcct
      661 ccggcggctc cgccgacgag cgcaccgaat gcgtcggcaa gcgcgccgcc cttcacgatg
      721 cgcgtcgcat cgtcttcctc ggcgtcttcg agctccggga agcccggcgc ggcagcagcc
      781 gccacgggcg atgattttgc agcgtcggcc ggcgcaacag cgggctttcc tgccgtgatg
      841 ggcgatgatt ttgcggctac ggcagccgcc gccatgggcg acgatttcgc gctgacggcc
      901 ggcgccgcag cacccgaact cgaaggcggc gctggtgccg gtgctttcgc ggtcgcggcg
      961 gccggcgcgc ccggttttgg cactggcgct ttagtcgaag aaaggggtgc cgactgaggc
     1021 ccacgcgacg catcggcccc gggcgtcatg ggcttcactg ccgatttgct cggcgtgagt
     1081 ggcgccggtg acgcgccagg cgccgacggc ggctttggca accccttcaa atcggtcagt
     1141 gtgggtcggc gtgcggaatc ggcgctcggt gctttcggcg cggtggcgac gcggcccggc
     1201 gtcgcggcag gcttcggcgg cacggccccg cgcgacgcgg cacccgtgtt gctcggcggg
     1261 ctcgcggcga gtggggcgct cttgggcaga gcgtcgggcg ctgcggtgcg ggtgtccgga
     1321 gatgtagtgg tcgatagagc gctcggtacg gcaggcgctt tcggcacgac gggcggcggc
     1381 gcgtcccaat cagcctcgtc cgggggcttg gtctccggcg cgggtgggat ctgactgatg
     1441 ggaatgacgt agccgcactt gcggcacttc atgcggactg agcgtccggc caccttgtcg
     1501 tcggcgatct ggtatttcgc cttacagctc gggcagagga acttcattcg ctagctcggg
     1561 ctcatccagg cgaaaatcac aggagtcgga gcaagtgctc cctgatggat agccgtgtcg
     1621 catcatcggg ggcaagcgcg agcgcccgct cccaggtctc tacggctttg ttccggaaac
     1681 cggccttctg gtacagaatc gccaggttct ttacggctgg aaaatgctgt gggtttacgc
     1741 tgacggcggt ttccagctcg gtgaccgcgt cgaaaacctg gcctcgccgg ccgtagagca
     1801 gcccgagctg gaacctgagc cggaatgcca aggggtcgat ggccaccccg cgcctgaggt
     1861 gctcgatggc ttcgtcgagc cgaccggccc ggtaggcggc gatcccctcg gctagcgcgc
     1921 tctccacgtc cacggccgcc tgggtcaccg cagcggcgtc ttgcggcggt tgcttggacg
     1981 gcagcttgcc gccgagcagc gcctgcacgc gcgagaggac gtcctgcagc gtgaacggct
     2041 tctcgatgaa gtcgtcgacg ccgagcgtcg tgcgcagatc ctcggcgtag cgccagccgc
     2101 ggtacacggc actcaccatc acgatcggga tcgcgccgta gcggcggctg cccttgatgc
     2161 ggcgcgcgac gtcgaagccg tgcacctcgg ggagcatcgc gtcgagcacg atgagatcgg
     2221 gcgtctgctc cttgacgatg cggagcgccg tcacgccacg atcggtctcg agcacgcggt
     2281 aacccgcgcg ggcaagcagg cgcgcgagca tctttcgaat ctcgagctcg tcgtcgacga
     2341 tgagaatcgt cttggcgccg gccggcgcgg gcggcaccga cgactcgcgc agcttttcct
     2401 cgggaatcgg ctcgacgacg ctgtcttcac gctggagcgc gtcgaaatcg ccctcctcga
     2461 tgtcgtcgct ctgcgacgcg cgtccgacgt cgtcgtcgac cacgacaccg ggtccgtgca
     2521 gcacgcgctg gctgtcgggc tcgccgccgt ctcgctcggg atcgagcggc tggccgtggc
     2581 gatcgatgcc gagcttgtcg agcatctcct gcgggcactg cgcaccgacg aagaacgctt
     2641 cgcctctcgc cttgcggccg tacgcatcgt cgatgacgct cgcgagcgac gactccagcg
     2701 ccacgtaggg atagacgcgc ttattcgtga cgaattcgag ctcgtcgagc actttgtgct
     2761 cgcgcgggtt cgccgtcgcg acgaacagac gatcgtcgcg catgagcacg ggcaaaatca
     2821 ggtgcttctc ggcaatctcg cgcggcaaga gatcgagcgt ctccagacgc aggcaaatct
     2881 gcccgagatc gatgcccggg atgccgtgct gctcgctcaa cgctttgagc gccgacaggt
     2941 cggtgatggt gccctcggcg gcgagccgcg acgcgaggcg gccgcctttc ttctccgaga
     3001 gggcgcgctc cagctggtcc ggagtgagcg cgcgctgccg aagcaagatc ttgccgatct
     3061 gcttcctgtc ggtcatccgg tcgattatct cccgaaagcc tcgtccgagt cacgggactc
     3121 tagcgcggaa agacgcgcct tcgcccactc gtcgtaagtg ccacgctcga tcgcgcgccg
     3181 agcggcggtc acgagctcca cgtagaaggc gacattgtgc agggtcaata gccgcgcggc
     3241 ggtcatctcg cgcgcgatat gcagatgtcg caggtacgcc cgcgaatagc ccccggcgca
     3301 ggttggacag cggcattcgg cgtcgagggg ggcgctgtct tcccggtagc gggcgttccg
     3361 gatggagatg cggcccgtgc gcgtgaacgc ctgcccgttt cgagcgttgc gggttgggat
     3421 gacgcaatcg aaaatgtcga tgccggtgcg gatcccgcgc accaggtcgg ccggtgtgcc
     3481 cacgcccatg agatagcggg gccgctcggg gtcgagtttc ggagccactt cgacgagcgt
     3541 gcggtgcatg agctcgttgg gctcgccgac gctgaaaccg ccgagcgcga gtccggcgaa
     3601 cggaagcttc gcgagcgcct cgaggtgggc gagccggagc tccacgtcca cacctccctg
     3661 cacgatcccg aatacggcct ggccggagtt agccgctgcg aggcaacgct cggcccagcg
     3721 cgtcgtgcgc gcgacggccg cttcgacctc cggccgcggc gcgccgcccg gtggacacac
     3781 gtcgagctgc atcgccacgt ccgaacccaa gagcccctgc acccgcatcg cctcttcggg
     3841 cgagagcaac aagcgccggc cgtcgaggtg cgaggaaaac tcgacgccct cctcgcgcag
     3901 caccacgcgc tcggctagcg agaatgcttg aaagccaccg gagtcggtca cgacggcgcc
     3961 acggaaacgc gagaagccct ggagcc
//
LOCUS       DATIML010000990         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4253347, whole genome shotgun sequence.
ACCESSION   DATIML010000990 DATIML010000000
VERSION     DATIML010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4253347"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /locus_tag="VLJ38_17095"
     CDS             complement(<1..882)
                     /locus_tag="VLJ38_17095"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU41298.1"
                     /translation="MADRDAARRVALSALAGEFAAVGNVGALVALVARRVSEVFGELC
                     VIHLLAAFGERQEPVRALHHPNPETLAAARSAGPTFERIGAGLMRRLAETHASGLLAT
                     FDTDAFLTGLDPDERGTLERLGVTSLVAAPLTLDARVAGVMLVMSRDPELPLGPLELR
                     SVEDMASRLGLMLARAHAARAERASHDALLDAHRSLRESGEAHRLLFDASPLPIFVFD
                     AETLSPLAVNRAALELYGFELDDFMRRSVAELAVTDHETVPARLATLGDDEASGVARY
                     RRRDGSEFVAEYTTRALS"
     gene            complement(1091..>2071)
                     /locus_tag="VLJ38_17100"
     CDS             complement(1091..>2071)
                     /locus_tag="VLJ38_17100"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HSU41299.1"
                     /translation="DEELACAVASAGGLGSLPCALLSPAAVSEQVAKYRQRTQAPVNL
                     NFFCHHSPPPSLDALAAWRARLEPYYRELKLEEAGTPGPTRRPFDADMCAVVEALRPE
                     VVSFHFGLPDAELVERVRATGAKVVASATTVAEARALEANGAHAIIAQGAEAGGHRGT
                     FLAEAGDDAELGTFALVPQIVDAVRLPVIAAGGIADARGVAAARALGASAVQVGTAYL
                     HCAESRISVAHRRALERAQDDSTRVTNVLTGRRARGLVNRLMRDFGLVVPSVPPFPLA
                     AMPLAPLRARAEAAERGDFSPLWAGQAAALRSAASARELTELLATGWPQP"
BASE COUNT          322 a          700 c          759 g          290 t
ORIGIN      
        1 gctgagtgca cgtgtcgtgt actcggccac gaactcggag ccgtcccgcc tgcgatagcg
       61 cgcgacgccg ctcgcctcgt cgtcgcccaa ggtcgcgagc cgcgcgggca cggtctcgtg
      121 atcggtgacg gcgagctcgg ccacgctccg gcgcatgaag tcgtcgagct cgaagccgta
      181 aagctcgagc gcggcccggt tgaccgcgag cggcgaaagg gtctcggcgt cgaagacgaa
      241 gatcggcagc ggactcgcat cgaagagcag gcggtgcgct tcgcccgatt cgcgcaggga
      301 gcgatgggcg tcgagcagcg cgtcgtgtga cgcgcgttcg gccctggccg cgtgggcccg
      361 tgcgagcatg aggcccagcc gagaagccat gtcctcgacc gagcgcagct cgagggggcc
      421 gagcggcagc tcgggatcgc ggctcatgac gagcatcaca ccggcgacgc gcgcgtccag
      481 cgtgagcggc gcagcgacca ggctcgtgac gccgagacgt tcgagagttc cgcgctcgtc
      541 cgggtcgagt ccggtgagga aagcgtcggt atcgaacgtc gcgagcagcc ccgaggcgtg
      601 cgtttcggct agccgtcgca tgagcccggc gccgatgcgc tcgaaggtgg gcccggcgct
      661 gcgcgccgca gcgagcgttt ccgggttcgg gtgatgaagg gctcgtacgg gttcctgccg
      721 ctcgccgaat gcggcgagca ggtggatgac gcagagctca ccgaacacct cgctcacgcg
      781 gcgcgcgacg agagccacga gcgcgccgac gttacccacg gccgcgaact ctcccgccag
      841 cgccgagagc gccacccgtc gcgcggcgtc tcgatcggcc aagtccgttt gcttgctcga
      901 cccgggctcg acggcacccg tagtaggacg cgacccgaat acgcccatgt gcctaggagc
      961 atataggtgg tagaggacga agtcactttg ggcgccgcgt cacgcccgcc gctcgtaagt
     1021 agccgaattc tctgtcggga aagcgatggt ccgtgtttcg tgaaggcgct tcgcctccgt
     1081 acgtaccagt tcagggctgg ggccagccag tcgcgaggag ctcggtgagc tcacgagcgc
     1141 tcgcggcgct gcggagcgcc gcggcttggc ccgcccagag cggagaaaaa tcgccgcgct
     1201 cggccgcttc ggcgcgcgct cgaagtggag cgaggggcat ggccgcgagc gggaacggcg
     1261 gaacggacgg gacgaccagc ccgaagtcgc gcatgagacg gttgacgagc ccgcgagctc
     1321 gccggccggt caggacattc gtcacgcgtg tcgagtcgtc ttgcgcccgc tcgagcgcgc
     1381 ggcggtgcgc gacggaaatg cggctttccg cgcagtgcaa atacgccgtg cctacctgaa
     1441 cggcgctcgc gccgagcgct cgagccgcgg cgacgccgcg tgcgtccgcg atgccccccg
     1501 ccgcaatcac cggcaggcgc accgcgtcga cgatttgcgg gacgagggcg aaggtgccga
     1561 gctccgcgtc gtcaccggct tccgcgagga acgtgccgcg gtgaccgccc gcttcggcgc
     1621 cctgtgcgat gatggcgtgc gcgccgttcg cttcgagggc gcgcgcttcg gcgacggtcg
     1681 tggcgctcgc gacgaccttg gcgcccgtgg cacgcacgcg ctcgacgagc tccgcgtccg
     1741 gtaacccgaa atggaagctc acgacctccg gccgtagcgc ctcgacgacg gcgcacatgt
     1801 ccgcgtcgaa agggcggcgc gtcgggcccg gcgttccggc ctcttcgagc ttcagctcgc
     1861 gatagtacgg ctcgagtcgc gcacgccaag cggcgagtgc gtcgagcgac ggaggcggag
     1921 agtgatggca gaagaagttc aaattgaccg gagcttgtgt gcgctgccga tacttcgcga
     1981 cctgctcgga cacggccgcc ggtgagagca gcgcgcaggg tagcgagcca aggccgcccg
     2041 cgctggccac cgcgcacgcg agctcctcgt c
//
LOCUS       DATIML010000991         3374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_210322, whole genome shotgun sequence.
ACCESSION   DATIML010000991 DATIML010000000
VERSION     DATIML010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3374
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210322"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VLJ38_17105"
     CDS             <1..188
                     /locus_tag="VLJ38_17105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41300.1"
                     /translation="YSGKAAAGFVAGSGRRRDAAQLFWSTKSTRPLPEVLESDLERAP
                     AFARRWLARAPSFERNR"
     gene            225..1439
                     /locus_tag="VLJ38_17110"
     CDS             225..1439
                     /locus_tag="VLJ38_17110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU41301.1"
                     /translation="MVREIRERVGDANIYRVYATTFALGVAYGLAISVLAVYLDQRGF
                     GEIAIGKLAAWFAAGLVCNSLPLGWFIKRFSAKTTLAASLFGYAVTISVFPLLGTFAA
                     LAAVRFVDGACSVGVWVSSETILLTRARREHKAYVTSLYAIAIAVGYVVGPLAARLAT
                     VLMPLAYTFEVSGVIALLTSLYAAFAIERDPPHLAHAAESVTDGARSSLGELIFRIKT
                     SCFATFAYGYFQASVVLFLPLFLMRSKGITKEQTILIPAFFAAGMLLFSNYAGRLGDR
                     RGHLGVMRVLATVGLSMIFAFVFLDSYAWMCAAVFVAGASLASISPVSLALQGVISPE
                     HGRATALYNSFYAVGILLGPLVSSVIFETYGGATMLFHLAALWTAFVLFSLVFYKDDP
                     AVLRLGTSLERS"
     gene            1463..2269
                     /locus_tag="VLJ38_17115"
     CDS             1463..2269
                     /locus_tag="VLJ38_17115"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HSU41302.1"
                     /translation="MLLAIDIGNTHIKFGLFRASELEHKVRLATDPGRTEDEYGVLLV
                     QALAQRGVTPDAVEAAIVASVVPALTDHIISLVRRLFKREPLVLGPGLKTGISVLYDS
                     PREVGPDRIADAVAAFERTGAGTIVVDFGTATTFNCISPKGEYLGGVIVPGVRIGYDA
                     LLAAAAKLTRVELAEPPRVLGRNTPHALQSGAVHGSAALVDGLVERLEAELGFECRVI
                     ATGGFASVIAKHAKRIESVDPDLTLQGLRLLHERNSDAPRPKGKKGVPEP"
     gene            2266..3120
                     /locus_tag="VLJ38_17120"
     CDS             2266..3120
                     /locus_tag="VLJ38_17120"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HSU41303.1"
                     /translation="MKRRALLGSSLAALALVTFGCRHAPAVASGARRIVSLAPGITET
                     LFAIGAGASVIARSDYCDYPPEVTRLPRVGTSLTPSYETITRLAPTLIVGEAGASARQ
                     RELAALGPTLLLPWLTLDEIVASTRELGRRTDTTAAADALATRLKTRLDVPPPPHGPR
                     VLLVIGNQPGKIDELWFIRDNSLHGAALHAAGAQNAVPEAVAGLPRLSVERLLAVDPD
                     AIFVLTEPGRAADDFIAPFRALAPLRAVARGHVVVIQVHDAFVHGPRILELIDRLAVE
                     VRKLGATP"
     gene            3117..>3374
                     /locus_tag="VLJ38_17125"
     CDS             3117..>3374
                     /locus_tag="VLJ38_17125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU41304.1"
                     /translation="MNPRALADVSTGARASARDGLVLRDVTVHASERALLERVNLDVE
                     PGRFVALVGPNGAGKTTLLRLAAGLIRPSAGSVRVLGLDPRA"
BASE COUNT          490 a         1259 c         1054 g          571 t
ORIGIN      
        1 cgtacagcgg caaagccgcc gcgggttttg tcgccggttc ggggcggcga cgcgacgcag
       61 cgcagctgtt ttggtccacc aaatccacgc gcccgttacc ggaggtgctc gaaagcgacc
      121 tcgaacgagc gcccgccttc gcgcgtcgct ggctcgctcg ggcgccgagt ttcgagagga
      181 accgttgacg ttctacggtc ttccgcgcga aaacgacggt ggcgatggtg cgagaaatcc
      241 gtgaacgcgt aggcgacgcc aacatctacc gcgtctacgc gacgaccttc gcgctcggcg
      301 tcgcctacgg tcttgccatt tcggtgctcg ccgtttacct cgaccagcgc gggttcgggg
      361 aaatcgcgat cggcaagctc gcggcttggt tcgcggccgg gctcgtctgc aactcgctgc
      421 cgctcggctg gttcatcaag cgcttctccg cgaaaaccac gctcgccgcg tcgctcttcg
      481 gctacgccgt gacgatcagc gtgttccctc tgctcggcac gttcgcggcg ctcgccgcgg
      541 tccgcttcgt cgacggcgcc tgttcggtcg gagtctgggt gagcagcgaa accatcctgc
      601 tcacgcgcgc gcgccgcgaa cacaaagctt acgtcacgag cctctacgcc atcgcgatcg
      661 ccgtcggcta cgtcgtcggg ccgctcgccg cgcgtctcgc cacggtgctc atgccgctcg
      721 cctacacgtt cgaggtctcc ggcgtcattg ccctgctcac gagcctctac gccgccttcg
      781 ccatcgaacg cgacccgccg cacctcgcgc acgccgcaga aagcgtgacg gacggcgcgc
      841 gctcgagcct cggggagctg atcttccgca tcaagacctc gtgcttcgcg accttcgcct
      901 acgggtattt ccaggcgagc gtcgtgctct ttttgcccct cttcctcatg cgttcgaagg
      961 gcatcaccaa ggagcaaacc atcttgatcc cggcgttctt cgccgccggc atgttgctct
     1021 tctcgaacta cgccggacgc ctcggcgatc ggcgcggcca cctcggcgtg atgcgcgtgc
     1081 tcgccacggt cggcctctcg atgatcttcg cgttcgtgtt cctcgattcg tacgcgtgga
     1141 tgtgcgcggc ggtcttcgtc gcgggcgcga gcctcgcgag catctcgccc gtgagcctcg
     1201 cgctccaagg tgtcatcagc cccgaacacg gccgcgccac ggcgctctac aactcctttt
     1261 acgccgtcgg catcctgctc ggcccgctcg tttcgagcgt gatattcgaa acctacggcg
     1321 gcgccacgat gctgtttcac ctggcggcgc tctggaccgc gttcgtactc ttcagtctcg
     1381 tcttctacaa agacgatcca gccgtactgc ggctcgggac gtcgctcgaa cgctcctgaa
     1441 gagtgatggt aggctcgccg ccgtgctcct cgccatcgac atcggcaaca cgcacatcaa
     1501 gttcggcttg ttccgtgcga gcgagctcga gcacaaagtg cgtctcgcga ccgaccccgg
     1561 ccgcaccgaa gacgaatacg gcgtgctcct cgtccaggcg ctcgcgcagc gcggcgtcac
     1621 gcccgacgcc gtcgaagccg ccatcgtcgc gagcgtcgtc ccggcgctca ccgatcacat
     1681 catctcgctc gtgcgacgtc tgttcaagcg cgagccgctc gtgctcggtc cgggcctcaa
     1741 gaccggcatt tccgtcctgt acgacagccc gcgcgaggtc ggccccgatc gcatcgccga
     1801 cgccgtcgcg gccttcgagc gcacgggcgc gggcaccatc gtcgtcgatt tcgggacggc
     1861 gacgaccttc aactgcatct cgcccaaggg ggaatatttg ggtggggtca tcgtgcccgg
     1921 cgtgcgcatc ggttacgacg cgttgctcgc cgcggcggcc aagctcacgc gcgtcgagct
     1981 cgccgaaccg ccgcgcgtgc tcggccgcaa cacgccgcac gcgctgcagt ccggcgccgt
     2041 gcacggcagc gccgcgctgg tagacgggct cgtcgaacga ctcgaagccg agctcggctt
     2101 cgaatgccgc gtgatcgcga cgggcggctt cgcgagcgtc atcgccaaac acgccaaacg
     2161 catcgagagc gtcgaccccg atctcacgct ccagggcctg cgcctcttgc acgagcgcaa
     2221 cagcgacgct ccgcgcccca aaggcaaaaa gggcgtcccg gaaccgtgaa acgtcgcgcg
     2281 ctcctgggct cgagcctagc ggcgctcgcg ctcgtcacgt tcggctgccg gcacgcgcct
     2341 gccgtcgcga gcggcgcgcg ccgcatcgtc tcgctcgcgc ccggcatcac cgagacgctc
     2401 ttcgcgatcg gcgcgggcgc gtccgtcatc gcgcgcagcg actactgcga ctacccgccg
     2461 gaagtcacgc gcctgccgcg cgtgggcacg agcctcaccc cgagctacga aaccatcacg
     2521 cgcctcgcgc cgaccctcat cgtcggcgaa gcgggcgcca gcgcgcggca gcgcgagctc
     2581 gccgcgctcg gcccgacact ccttttacct tggcttaccc tggacgaaat cgtcgcgagc
     2641 actcgcgaac ttggccggcg cacggacacg acggccgccg ccgacgcact cgccacacgc
     2701 ctgaaaactc gcctcgacgt ccccccaccg ccgcacggcc cccgcgtcct cctcgtcatc
     2761 ggtaaccagc cgggtaaaat cgacgagctc tggttcatcc gcgacaattc gctgcacggc
     2821 gccgcgctcc acgccgcggg cgcgcaaaac gccgtacccg aagccgtcgc ggggctgccg
     2881 cgcttgtcgg tcgagcggct cctcgccgtc gatcccgacg ccattttcgt tttgacggag
     2941 ccgggccgtg cggcggatga cttcatcgcg cccttccgcg cgctcgcgcc gctccgagcc
     3001 gtggcacgcg ggcacgtcgt cgtgatccaa gtgcacgacg cgttcgtgca cgggccgcgc
     3061 attctcgagc tcatcgaccg actcgcagtg gaagtgcgaa agctcggagc aacgccgtga
     3121 acccgcgcgc actcgccgac gtgagcaccg gagcgcgagc gtccgcgcgt gacggcctcg
     3181 tgctccgcga cgtgacggtg cacgcgagtg aacgcgcgct gctcgagcgc gtgaatctcg
     3241 acgtggaacc cggccgtttc gtcgcgctcg tcggcccgaa cggcgccggt aagacgacgc
     3301 tcctgcggct ggcggccggc ctcattcgac cgagcgcggg gagtgttcgc gtgctcggcc
     3361 tcgatccccg ggcg
//
LOCUS       DATIML010000992         3189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3677941, whole genome shotgun sequence.
ACCESSION   DATIML010000992 DATIML010000000
VERSION     DATIML010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3677941"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..821
                     /locus_tag="VLJ38_17130"
     CDS             <1..821
                     /locus_tag="VLJ38_17130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase"
                     /protein_id="HSU41305.1"
                     /translation="DFLVAPSSRQTLEVLAQSGALVDLIATGARIVESDPRLLTGELY
                     PPPPGGVSMRTFDPEPDHPPIKAVVASAETLAFAVATGTVGDPRSFKRPVRVTVPRTL
                     PTDDVLMVRKTKGKGKEGDGSRAAPLEAPPVHGWRVALTLPLVAQRGKPEQPSALVLG
                     SLDDVRWIARRAPELSGAVRAVIASHIPAGVVALLAGTGILALRADADALRALQSQPS
                     LGLPAVAEWNGKSTISVSAGGKAVELTFLAVGAEREWTAAGSARTHAVVAAAKR"
     gene            843..1445
                     /locus_tag="VLJ38_17135"
     CDS             843..1445
                     /locus_tag="VLJ38_17135"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HSU41306.1"
                     /translation="MSGQNRLLLLAPGAGAPSSSGFMQAQRQRLAALGRVEPFDYPYQ
                     LAGRKSPDRLPVLIDAHVTALERASAGHDGPVVLVGKSMGGRVGCHVGVKLGARVAAL
                     VCLGYPLVGQRGDVREAVLLELERPVLFVQGTRDKLCPLERLRALLPRLRAPHALYVV
                     PGGDHSLLVGKRELAARVETQTAVDTAVTRAIAAFLDEYA"
     gene            1451..2179
                     /locus_tag="VLJ38_17140"
     CDS             1451..2179
                     /locus_tag="VLJ38_17140"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSU41307.1"
                     /translation="MLGYSSLGEWLVASAIVMTGAALQGSAGFGFALLSAPILGWVDP
                     HLVPAPLIIAVTLLLVLTAWRERSAVDLKGLGWVLGGRVPGTVLGAFALKSLSERALT
                     LVLGLLVLVAVGVSLGSVRLERRPPLLVAAGVVSGLMGTTAALGGPAVAVLYQHERGA
                     LVRATLATYFLVGALMSLTALGVVGRLGQREFGLALGLLPGIALGFGGSRWTSRWLDR
                     GYTRLAVLAIAGLAGLGSVIHGLL"
     gene            2198..2962
                     /locus_tag="VLJ38_17145"
     CDS             2198..2962
                     /locus_tag="VLJ38_17145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41308.1"
                     /translation="MAPLRPLRLISLLVVPLWLCLGAARPSFGAVKDDDASPSAKDDA
                     SDDSEAPKQKPEAESEKADATKAETKDTNYGHVGQFGLRAGLVVGYRMIIRYSDSPFC
                     ATPDGGPADSQQTFCGHGAPLATDLALSFGVLDFLEPFVWARLGFGPERQTDTNPLRV
                     LGAGVRLYTMSDAAFKIFVEPAVGLELEGGRGTPAWQLNSPQYKNDFVFKIAAGPQYD
                     FARNVGIYVTGGVSAAFLRALGASLDLSFGVQGRLP"
     gene            2959..>3189
                     /locus_tag="VLJ38_17150"
     CDS             2959..>3189
                     /locus_tag="VLJ38_17150"
                     /inference="COORDINATES: protein motif:HMM:NF025050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU41309.1"
                     /translation="MTATRPFRVLGVQQVAIGSTDKQKLRRLWVDLLGVEPVGDFRSD
                     DENVDELILRAGEGEHAVEIDLMQPLRPGERPR"
BASE COUNT          429 a         1132 c         1095 g          533 t
ORIGIN      
        1 tcgacttcct cgtagcgccc tcgtcgcggc agacgctcga ggtgctcgcg cagtccggcg
       61 cgctcgtcga tctgatcgcg accggcgcgc gcatcgtgga gtccgatccg cgcctgctca
      121 cgggcgagct ctacccgccc ccaccgggcg gcgtttcgat gcgcaccttc gatccggagc
      181 ccgatcaccc gccgatcaag gccgtggtcg cctcggctga aacgctcgcg ttcgcggtgg
      241 cgaccggaac cgtgggcgat ccgcgctcgt tcaagcggcc cgtgcgcgtg acggtgccgc
      301 gcacgctgcc gacggacgac gtgctcatgg tgcgtaagac caagggcaaa ggcaaggaag
      361 gcgacggctc gcgcgcggcc ccgctcgaag cgccgcccgt gcacggctgg cgcgtcgcgc
      421 tgacgctccc gctcgtggcc cagcgcggca agccggagca gccgagcgcg ctcgtgctcg
      481 gctcactcga cgacgtgcgc tggatcgctc gtcgcgcgcc ggagctctcc ggcgccgtgc
      541 gcgccgtgat cgcgtcgcac attccggccg gcgtcgtggc gctgctcgcc ggcacgggta
      601 tcctcgcgct tcgcgcggat gcggacgccc tacgcgcgct ccagagtcag ccgtcgctcg
      661 gtttgcccgc cgtcgcggag tggaacggca agagcacgat cagcgtgtcg gcgggaggca
      721 aagccgtcga gctcacgttc ctcgccgtag gcgccgaacg cgaatggacg gccgcgggca
      781 gcgcgcgcac tcacgccgtc gtcgcggcgg caaagcgcta gctttcagcc gaattccgcg
      841 ccatgagcgg gcaaaatcgc ttgttactgc tcgctcccgg cgccggcgcg ccgagttcgt
      901 cgggcttcat gcaggcgcaa cgacagcgcc tcgcagcgct cggacgcgtc gagccgttcg
      961 attaccccta ccagctcgcc gggagaaagt cgccggaccg cctgccggtc ctcatcgacg
     1021 cccacgtgac ggcactcgag cgagcgagcg cgggacacga cggacccgtc gtgctcgtcg
     1081 gcaagagcat gggcggacgc gtgggctgtc acgtcggcgt gaagctcggc gcgcgcgtcg
     1141 cggcgctcgt gtgtctcggt tatccgctgg tcgggcagcg cggtgacgtg cgcgaggccg
     1201 tcttgctgga gctcgagcgg ccggttttgt tcgtgcaggg cacgcgcgac aagctgtgtc
     1261 cgctcgaacg gttgcgagcg ctcttgccgc gcctgcgcgc tccgcacgcg ctctacgtcg
     1321 tcccgggcgg cgaccattcg ctcctggtcg gcaagcgcga gctcgcggcg cgcgttgaga
     1381 cccaaaccgc ggtcgatacc gcggtgaccc gcgccatcgc ggcttttctc gacgagtacg
     1441 cgtgacgggc atgctcggct acagctcgct cggcgagtgg ctggtcgcga gcgcgatcgt
     1501 gatgaccggt gcggcgctcc aaggcagcgc cggtttcggc ttcgcgctct tgtccgcacc
     1561 gatcctcggc tgggtcgatc cgcatctcgt cccggcaccg ctcatcatcg ccgtgacgct
     1621 cttgctcgtc ttgaccgcat ggcgcgagcg gagcgccgtg gacttgaaag ggctcggctg
     1681 ggtgctcggc ggccgcgttc cgggcaccgt actcggcgcc ttcgcgctca agtcgttgag
     1741 cgagcgcgct ctcacgctcg tgctcggctt gctcgtgctc gtcgccgtcg gtgtctcgct
     1801 cggttcggtg cggctcgaac gacggccgcc gttgctcgtc gccgccggtg tcgtgtccgg
     1861 cctgatgggc acgacggccg cgctcggtgg tcccgccgta gccgtgctct atcaacacga
     1921 acgcggcgcc ctcgtccgcg ccacgctggc gacgtacttt ctcgtaggcg cgctgatgtc
     1981 gctgacagcg ctcggcgtcg tcgggcgcct cggccagcgc gagttcggcc tggcgctcgg
     2041 acttttgccg gggatcgcgc tcggtttcgg cggctcgcgc tggaccagtc gctggctcga
     2101 ccgcggctac acgcgcctgg ccgtactcgc catcgcgggc cttgctggcc tcggctcggt
     2161 gatacacggg ctcctctgaa tcagctatcg tgcgggcgtg gcgcccctcc gccctcttcg
     2221 gctcatttcc ttactggtcg tgccgctctg gctctgcctc ggcgccgctc gcccaagctt
     2281 cggcgcagtc aaagacgacg acgcaagccc gagcgccaag gacgacgcga gcgacgactc
     2341 ggaggcgccc aagcagaagc ccgaggcgga gagcgaaaaa gccgacgcca ccaaggccga
     2401 gaccaaagac acgaactatg gccacgtcgg ccaattcggc ctgcgcgcgg ggctcgtcgt
     2461 cggctatcgg atgatcatcc gttactcgga ttcgccgttc tgcgccacgc cggacggcgg
     2521 tcccgcagac tcacagcaaa cgttctgcgg acacggcgcg ccgctcgcga ccgacctcgc
     2581 cctaagcttc ggggttttgg attttctcga accgttcgtg tgggcgcgcc tcggcttcgg
     2641 ccccgagcgg cagaccgaca cgaatccact ccgcgtgctc ggcgcgggcg tgcgcctcta
     2701 cacgatgagc gacgcggcct tcaagatctt cgtcgagccg gcggtcggcc tcgagctcga
     2761 gggcggccgt ggcactcccg cctggcagct caatagcccg cagtacaaga acgatttcgt
     2821 gttcaaaatc gcggcgggcc cgcaatacga cttcgcgcgt aacgtcggta tttacgtcac
     2881 gggcggcgtc tcggccgcct tcctgcgcgc gctcggggcc tcgctcgatc tgagcttcgg
     2941 cgtgcagggc cgcctgccgt gacagcgacg cgaccgtttc gcgtcctcgg cgtgcaacag
     3001 gtcgcgatcg ggagcaccga caagcagaag ctccgaaggc tctgggtcga cttactggga
     3061 gtcgagccgg tgggtgactt tcggagcgac gacgagaacg tcgacgagct cattttgcgc
     3121 gcgggcgaag gcgagcacgc cgtcgaaatc gacttgatgc agccgctgcg cccgggcgaa
     3181 cgcccccgc
//
LOCUS       DATIML010000993         4574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3961105, whole genome shotgun sequence.
ACCESSION   DATIML010000993 DATIML010000000
VERSION     DATIML010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3961105"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VLJ38_17155"
     CDS             complement(<1..389)
                     /locus_tag="VLJ38_17155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41310.1"
                     /translation="MDPVVRAALRLQRAAAKIAGSCLALALGAYLVLWVANRPPELLS
                     AGALGVFALSFVTRLLGRVRGGVAEGGTRRLDAEILLHLFVGAYAVVLCLPGGLDGAA
                     YPLVYAVALLGGSFTGAVTSACAIAFAV"
     gene            453..1916
                     /locus_tag="VLJ38_17160"
     CDS             453..1916
                     /locus_tag="VLJ38_17160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU41311.1"
                     /translation="MRAGLRLRLLLLLGGLLLVAFVPLFFAVATYTSLTLQKLRESHA
                     RSLGRTIAGHVAAVGVGRTPDELMPLLRSQLGAEGLEAVGVYGADGRPLARVGEPSAV
                     AALPANAHPNREGTADVETEHGRALAVLVPRRPGAVVAIVRTDDDSAHTTPLLRLLAL
                     YTALVALALLTATYAALTRLIVRPVDALANAAERVANGARQLAVPRTTVRELGELGQS
                     LHTMTARLIAEEDKLRSKIDEVEHATARLRETQAQLVRSERLASVGRLAAGLAHEIGN
                     PIAALIGLEDLLLAGGLEPAEERDFLQRMRRETDRVHRILRDLLAFARPSTARDEARE
                     PGSVEAAVHDTAALVMPHPALREAELALDVHADLPPVTLSREQLVQVILNLVLNAADA
                     VAPGGHVRIEASRAAAGVRLSVSDDGPGIAPDVRDRLFEPFVTTKEVGKGTGLGLAVC
                     RGLVEAAGGTIELDPSVVRGARFVVELPAVAPNPSSE"
     gene            2027..3577
                     /locus_tag="VLJ38_17165"
     CDS             2027..3577
                     /locus_tag="VLJ38_17165"
                     /inference="COORDINATES: protein motif:HMM:NF018435.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSU41312.1"
                     /translation="MRLGIDFGTTRTVVAAAVDGRYPVAVFETPRGFAEFVPGLAVRG
                     HGELTLGWEAAADISSASEAIIRSIKREAGGRLPDERLRDLGIDRTALELTADYLRFL
                     RRMLLERSNLELDEFEPLETMVAVPANASTSQRYLTVEAFNRAGFRVLGLINEPTAAA
                     IEYAHNHLTVLGKRSPKRYVVVYDLGGGTFDTSAVSLVDRRFDLIATEGIGRLGGEDF
                     DAVILELALAAARIDPASLAPVQRAHLLEICREAKEALSPGSRKLSLDFGACLDGMDL
                     VTLEMAAVNEACMPLVLRTLELLERILASVAEHGHDPHNARELGGVYLVGGGTGFPLV
                     GKLLRERYKRKVLIAPQPHAATAVGLAIAADPEAQIFVREAVTRHFGVWREGEAGRNK
                     IFDPIISKGVLPDDDGLSIERRYRPVHAVGHLRFLECSEIDASGQPRGDMTPWGDILF
                     PYDAALVGRPDLTGIPLDQRLAGGEVEIVERYGYGRDGAIWVSIENATCGYSRRYVLG
                     QPGSVAAA"
     gene            3601..>4574
                     /locus_tag="VLJ38_17170"
     CDS             3601..>4574
                     /locus_tag="VLJ38_17170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41313.1"
                     /translation="MNEPVRPASVPAGAVYNAESALWELAEHDAHGTRHGAFSAFRAD
                     GALVTRGAYRAGKRDGTFSTFSDEAPSARPLRACCVPPGARELRTRYCDGRVLDETFY
                     DEHGRGLCDDGTPWPERDVTVPKSARFEPANGRFIDRSEHAEGYATLRVYQPNGSFEE
                     EVEIVAGRARRHRRYATDGSCREETELDDRGARDGAFFARFAATEPHYADARVREVRG
                     QHEHGEPVGTWELRDVDGAIVRCVEYGDVLAEATPYVAGTEPYGVASAESLWVLAATP
                     RRAPREAMALAVRALAQSRNRERFERYCAERLAPLRPEHAETAGQLAVA"
BASE COUNT          688 a         1614 c         1608 g          664 t
ORIGIN      
        1 acggcgaacg caatcgcaca agcgctcgtg accgcacccg tgaagctccc gccaaggagc
       61 gcgaccgcat agacgagcgg ataggccgcg ccgtcgagac cgcccggcag gcacagcacg
      121 accgcgtagg cgcccacgaa caggtgcaag aggatctcgg cgtcgagccg gcgtgtccca
      181 ccttccgcga cccctccgcg cacgcgcccg agcaggcgcg tcacgaacga cagcgcgaag
      241 acgccgagcg caccagcgct caagagctcg ggcggccgat tcgcgaccca caggacgagg
      301 taggcgccga gggcgagggc aaggcaggag cccgcgatct tcgcggcggc gcgctgcagc
      361 cgaagggcgg cccggacgac gggatccatc gtgaaaccgc gtatcagcct cgcgccagct
      421 tggcccagtt ttgggggtga tatcgtcggc gggtgcgcgc cggtttgagg cttcggctgc
      481 tgctcttgct cggcggcctg ctcctcgtcg cgttcgtgcc gctcttcttc gcggtcgcga
      541 cctacacgag cctcacgctg cagaagctgc gcgagtcaca cgcgcgttcg ctcggccgca
      601 cgatcgccgg acacgtggcc gcggtgggtg tgggacgcac acccgacgag ctcatgccgc
      661 tcttgcgctc gcagctcggc gccgagggac tcgaagccgt cggcgtgtac ggcgcggacg
      721 ggcggccgct cgcgcgcgtc ggtgaaccga gcgccgtggc cgcgctgccc gcgaacgccc
      781 acccgaatcg cgaaggcacc gccgacgtcg agaccgagca cggccgtgcg ctcgccgtgc
      841 tcgtgccgcg ccgtcccggc gccgtcgtcg ccatcgtgcg caccgacgac gattcggcgc
      901 acacgacgcc gctcttgcgc ttgctcgcgc tttacaccgc gctcgtcgcg ctcgcgctgc
      961 tcaccgcgac gtacgccgcg ctcacgcgcc tcatcgtgcg accggtcgac gcgctcgcga
     1021 acgccgccga gcgcgtcgcg aacggcgcgc gccagctcgc ggtaccacgc accacggtgc
     1081 gcgagctcgg cgagctcggc cagagcctcc acacgatgac ggcgcggctc atcgcggaag
     1141 aagacaagct ccggagcaag atcgacgagg tcgagcacgc gaccgcgcgc ctgcgcgaaa
     1201 cccaggcgca gctcgttcgc tccgagcgac tcgcttccgt ggggcggctc gccgccggcc
     1261 tcgcacacga aatcggcaac cccatcgccg cgctcatcgg cctcgaagac ttgctgctcg
     1321 cgggcggcct cgagcccgca gaggaacgcg atttcctgca gcgcatgcgg cgcgagacgg
     1381 accgcgtgca ccggatattg cgggacctgc tcgcgttcgc gcggccctcg acggcccgcg
     1441 acgaagcgcg agagcccggt tcggtcgaag ccgccgttca cgataccgcc gcgctcgtga
     1501 tgccgcaccc cgcgctgcgt gaagccgagc tcgcgctcga cgtgcacgcg gatttgccgc
     1561 cggtcacgct cagtcgcgag cagctcgtgc aggtgatctt gaatctcgtg ctcaacgcgg
     1621 cggacgcggt cgctccgggg ggtcacgtgc gcatcgaagc ttcccgtgcg gcggcgggag
     1681 tccgcttgtc ggtgagcgac gacggacccg gcatcgcccc ggacgtgcgc gaccgcttgt
     1741 tcgagccgtt cgtcacgacc aaagaggtcg gcaaaggcac cgggctcggc ttggccgtgt
     1801 gccgcggtct ggtcgaagcc gccgggggca ccatcgagct cgatccgagc gtcgtgcgcg
     1861 gagcgcgctt cgtggtggag ttgccggccg tagcgccgaa cccatccagc gagtagcgcc
     1921 aggcaggcgc caaagtcggc cgaacggcgc ttcgcactga agtctggacc acgggccgga
     1981 agtctcgctg tatagtctcg cggtcccccg tgtggggcta ctcggcatgc gtcttgggat
     2041 cgacttcggg acgacacgga ccgtcgtggc agcggcggtg gatggtcgct atccggtcgc
     2101 ggttttcgag acgccgcgtg gcttcgcgga gttcgtgccg gggctggcgg tgcgtggcca
     2161 cggtgagctc acgctcggct gggaggctgc ggctgatatc agcagcgcga gcgaggccat
     2221 catccgctcg atcaagcggg aggcgggcgg gcggttgccg gacgaacgcc tgcgcgacct
     2281 cggcatcgat cgcacggcgc tcgagctcac ggcggactac ctgcgcttcc tccggcgcat
     2341 gctgctcgaa cgcagcaacc tggagctcga cgagttcgaa ccgctcgaga cgatggtcgc
     2401 cgtgcctgcg aacgcctcga cgagtcagcg ctacctcacc gtggaagcgt tcaaccgtgc
     2461 gggctttcgc gtgctcggat tgatcaacga gccgaccgcg gcggcgattg agtacgcgca
     2521 caatcacttg acggtcctcg gcaagcgctc gcccaagcgc tacgtcgtcg tctacgacct
     2581 cggcggcggc accttcgaca cctccgccgt ctcgctcgtc gaccggcgtt tcgatctgat
     2641 cgccaccgag ggcatcgggc ggctcggcgg cgaggatttc gacgccgtca ttctcgagct
     2701 cgcgctcgcg gccgcgcgca tcgacccggc aagcctcgcg cccgtgcagc gcgcgcacct
     2761 gctcgagatt tgtcgcgagg ccaaggaggc actgtcgccg gggagccgca agctctcgct
     2821 cgatttcggc gcctgtctag acggcatgga cctcgtgacg ctcgagatgg cggcggtgaa
     2881 cgaagcctgc atgcccctcg tcctgcgcac gctcgagctc ctcgagcgca tcttggcgag
     2941 cgtcgccgag cacggccacg atccccacaa tgcgcgcgag ctcggcggtg tctacctggt
     3001 cggcggcggc acggggtttc cgctcgtcgg caagctcttg cgcgaacgct acaagcgcaa
     3061 ggtgttgatc gcgccgcagc cgcacgccgc gacggcggtc gggctcgcca tcgccgcgga
     3121 tccggaagcg cagatcttcg tgcgcgaagc cgtgacgcgc catttcggcg tctggcgcga
     3181 gggcgaagcg gggcgaaaca agatcttcga tccgatcatc agcaaggggg tcttgcccga
     3241 cgacgacggc ttgagcatcg aacgccgcta ccggcccgtg catgccgtcg gtcacctgcg
     3301 ttttctcgag tgcagcgaga tcgacgcgag tggtcagccg cgcggcgaca tgaccccgtg
     3361 gggcgacatt ctatttccct acgacgcggc gctcgtcggc cgcccggacc tcacgggcat
     3421 tccgctcgac cagcgactcg cgggcggtga ggtcgaaatc gtcgagcgct acggttacgg
     3481 gcgcgacggc gcgatttggg tatcgatcga gaacgcgacg tgcggctact cgcggcgtta
     3541 cgtgctcggc cagccgggct cggttgcagc cgcttgagta gcggtcacgc tcaagcgacc
     3601 atgaacgagc cggtacgccc ggcgagcgtc cccgccggcg ccgtctacaa cgccgaatcg
     3661 gcgctgtggg agctcgccga acacgacgcg cacggcacgc ggcacggcgc gttctcggcg
     3721 tttcgcgccg acggcgcgct cgtcacgcgc ggcgcgtacc gcgcgggcaa gcgcgacggc
     3781 acgttctcga cctttagcga cgaagctccg agcgcgcgcc cgctccgtgc gtgctgcgtg
     3841 ccgccgggag cccgcgagct ccgcactcgt tattgcgacg gccgcgtgct cgacgagacg
     3901 ttttacgacg aacacgggcg cggtctttgc gatgacggca cgccttggcc cgaacgcgac
     3961 gtgaccgtgc cgaagagcgc gcgcttcgaa ccggcgaacg ggcgcttcat cgatcgcagc
     4021 gagcacgccg aaggctacgc gacgctgcgc gtgtaccagc cgaacggctc gttcgaagaa
     4081 gaagtcgaga tcgtcgcggg gagggcacgc cggcaccggc gctatgcgac ggacggcagt
     4141 tgccgggagg agacggagct cgacgaccgg ggcgcgcgtg acggcgcgtt tttcgcgcgt
     4201 tttgcggcaa ccgagccgca ctacgccgac gcgcgcgtgc gcgaagtgcg cggccagcac
     4261 gagcacggtg aacccgtcgg cacgtgggag cttcgcgacg tggacggggc gatcgtgcgg
     4321 tgcgtcgagt acggcgacgt gctcgcggag gcgacgccgt acgtcgcggg gacggagccg
     4381 tacggcgtcg cctccgccga gtcgctctgg gttctcgccg caacgccccg tcgggcgccg
     4441 cgcgaagcga tggcgctcgc cgtgcgcgct ctcgcgcaga gccgtaaccg cgagcgtttc
     4501 gagcgttact gcgccgaacg cctcgccccg ctgcgccccg agcacgccga aacggcaggc
     4561 caactcgccg tcgc
//
LOCUS       DATIML010000994         5625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3961359, whole genome shotgun sequence.
ACCESSION   DATIML010000994 DATIML010000000
VERSION     DATIML010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5625
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3961359"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1124)
                     /locus_tag="VLJ38_17175"
     CDS             complement(<1..1124)
                     /locus_tag="VLJ38_17175"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41314.1"
                     /translation="MADRFSSIPSPGTLNGALIRSEVQPGVSYRLERQIGEGGMGTAV
                     LALRHAPDGVSPVVIKMVRSGFGTGPSDAAAGMVVLKEAVALGRLNERVPPTPFVVRL
                     VDTGAAELHGPSKPATPWLAVEYVHGGIEGTTLEDRIAYGVERTGFAFDAARAAHLLR
                     CLAAGMLAIHGVGVIHRDLTPGNILCCGFGEAEIFKISDFGIARPQGLAATFGGVPVG
                     TVGYAAPEQVMPDTIGVGTYTDVFSLACVVYFALTGQHYFEAGTPIAAMTLMRGKKRK
                     SILDGKHVAPEIRQRAEACRAIDQLLARATSVEPDRRPQEGQDLAATLVPLLTESSTP
                     LRPARRLMNSLLNLAPPGDLTSWLWTVRHPPGGDRTVLSAA"
     gene            complement(1225..1617)
                     /gene="apaG"
                     /locus_tag="VLJ38_17180"
     CDS             complement(1225..1617)
                     /gene="apaG"
                     /locus_tag="VLJ38_17180"
                     /inference="COORDINATES: protein motif:HMM:NF003967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HSU41315.1"
                     /translation="MSTSEAVTRQVRVHVDCRFSPERSDAARREYFFLYTVRITNDGA
                     EPVQLLNRHWIITNAHGRVEEVRGPGVVGQQPRLGPGESFEYTSGCPLDTPFGSMRGT
                     YELVALERSERFDVDIAPFALREEGHFH"
     gene            1808..2476
                     /locus_tag="VLJ38_17185"
     CDS             1808..2476
                     /locus_tag="VLJ38_17185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family hydrolase"
                     /protein_id="HSU41316.1"
                     /translation="MAACYFDIDGTLVRTNLVQPTLYYLLNQGTPVQTALRLGKALFK
                     APRMAYAEILDRRTFNELLYSAYAGMSEDRLALLADEVFDAVLRPALYPAAQGLVDKS
                     RAAGHEVVFVSGALDWIVRRVAAHFGGGGVIANRLELKAGIATGKLLKPVVAGPEKAR
                     IVRDHARAQGYDLDECFAFSDSYSDVPMLSVVGHPAAVNPDKRLALLAKAYSWPLFDL
                     TLPA"
     gene            2508..4103
                     /locus_tag="VLJ38_17190"
     CDS             2508..4103
                     /locus_tag="VLJ38_17190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactate racemase domain-containing protein"
                     /protein_id="HSU41317.1"
                     /translation="MNHPCLVTLERDSAPRTLFSGDRLVEVDLPVGTRVIYPKPPLEP
                     LRDPDAAIRYALNHPLGGDPLHARLRPGMKVTIAVDDISLPLPPMRRPDVRERVVTIV
                     LELLADHGVEDIEIIVATGVHRRMKAHEIRHMLGDRIFDAYYPDRLYNHDAEDSANLV
                     EIGRTPRGEVLELNRRAAESDLLIYANLNYVPMNGGYKSVAVGLTGYRSLRPHHNPHS
                     IRQSDSYMDPARSELARDIERMGRLAHEKLPIFTIETTINNRMFDRSLEFLVKNEDEL
                     SARERAMLKALVISTAKLPQPARHAIFDKFPAPYGMTGVWAGDVELVHERSVARNFEQ
                     YCVPIEGQADVLVYGVPYISPYNVHAFLNPLLVQVLAQGYLFNMYRGAPLVKKGGTLI
                     LLHPCTDKFDHEQHASYIDFVHRLLPETRDAVLLRERYEEKYARDPALVQMYRTGHAY
                     HPSHPFFMWYWGENGRQHLGRVIVVGADNEYIPKLFGWETAPNMEDALYRAKGGENRS
                     LSVTALHVPPVIMGDVTLPGGGG"
     gene            4100..>5625
                     /locus_tag="VLJ38_17195"
     CDS             4100..>5625
                     /locus_tag="VLJ38_17195"
                     /inference="COORDINATES: protein motif:HMM:NF019605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU41318.1"
                     /translation="MSTNGSSNGSNGAHAPNGVHAPNGAAHGWDSAHAAGSLAAVSAG
                     ATLDLEALFAGKRFVVVGGTGYLGKTWWSFLLAHWPSVEHLYLLVREKGKQSAEERFW
                     QEIVPTAVFDPLRAAYGERFEAFIREKVTPVAGDVVRPFCGLAPDLRADLRGSIAAVV
                     NAAGVVDFDPPLDEALEVNAFGVQNLVALARDLGDLPLLHTSTCYVAGSRTGHVHEAS
                     PLEFPFPRADELERTHWDPDREIAECLDVIEQARHRGSDAFRQSRFLDEAKKNLAERS
                     EPARGRVLEAEVGKVRRKFVEARLAETGMERAQFWGFPNTYTYTKAIGEQIVARSGLA
                     FTIVRPAIVESSLSYPMPGWNEGINTSAPLIYILREGGLQIPGSDHFLDFVPVDMVAG
                     GMCVALGELVQGTAKAVYQLGSSDSNPCTMRRFFELTGLYKRKYYQRTLRGGPLLAYV
                     QAHFEGALLSRTQFESYGPKKIASGARQVKGLLERVKALGAGTSLLEPAAEAIEKFAR
                     "
BASE COUNT          914 a         1888 c         1895 g          928 t
ORIGIN      
        1 gccgcggaga gcaccgtgcg gtcgccgccc ggcgggtgac gtaccgtcca gagccagctc
       61 gtgagatccc cgggcggcgc tagattgagc aggctgttca tcaggcggcg cgcggggcga
      121 agcggcgtcg agctctcggt gagcaggggc acgagggttg cggcgaggtc ctggccttcc
      181 tgcgggcgcc ggtcaggctc gacggaggtc gcgcgcgcga gcagttggtc gatggcgcgg
      241 cacgcttcgg cgcgctggcg gatttcgggc gcgacgtgct tgccgtcgag gatgctcttg
      301 cgcttcttgc cgcgcatgag cgtcatcgcg gcgatcggcg tgccggcctc gaaatagtgc
      361 tgccccgtga gcgcgaagta gacgacgcag gccaggctga acacgtcggt gtaggtgccg
      421 acgccgatcg tgtccggcat cacctgctcg ggcgcggcgt agcccacggt gccgacgggc
      481 acgccgccga acgtcgccgc gagcccttgc ggccgcgcga tgccgaaatc gctgatcttg
      541 aagatctcgg cttcgccgaa gccacagcac aggatgttgc ccggcgtgag atcgcggtgg
      601 atgacgccga cgccgtggat cgcgagcatg ccggcggcga ggcagcgcaa gaggtgagcg
      661 gcgcgcgccg cgtcgaaggc gaacccggtg cgctcgacgc cgtaggcgat gcggtcttcg
      721 agcgtcgtgc cttcgatacc gccgtggacg tactcgacgg cgagccacgg cgttgcgggt
      781 ttcgacggac cgtgaagctc ggccgcgccg gtgtcgacga gccgcacgac gaacggcgtc
      841 ggcggcacgc gttcgttcaa gcgtccgagc gcgacggctt ccttcaagac gaccatgccg
      901 gccgcggcgt ccgagggtcc ggtgccgaaa ccgctccgca ccatcttgat gacgacgggt
      961 gagacgccgt cgggtgcgtg gcgcaacgcg aggaccgccg tgcccatccc accttcgccg
     1021 atctggcgtt cgaggcgata gctgacgccc ggctgtacct cggagcgaat cagcgctccg
     1081 ttgagcgttc cggggctcgg gatgctggag aagcgatcgg ccatgcgcgg ggcccccgag
     1141 agcgcctttc aggctaccac gcttttttcg gcgagctccg cctcacccaa caaatgtccg
     1201 ggcgctggtc tcgtcgcgag tccttcaatg aaaatgcccc tcttcacgca aggcaaacgg
     1261 cgcgatgtcg acgtcgaaac gctcgcttcg ttcgagcgcg acgagctcgt acgtgccgcg
     1321 catcgagccg aacggcgtgt cgagcgggca gcccgacgtg tactcgaagc tctcgcccgg
     1381 accgagccgg ggctgctggc cgacgacgcc tgggccgcgc acctcttcga cccgaccgtg
     1441 cgcgttggtg atgatccaat gccggttcag cagttgaacc ggttcggcgc cgtcgttcgt
     1501 gatgcggacg gtatagagaa agaagtactc gcgccgggcg gcgtccgagc gttcgggtga
     1561 gaaacgacaa tcgacgtgca cgcgcacctg gcgcgtgacg gcttccgagg ttgacaccta
     1621 gcggctcctc tttcggagac tcacacgtct ccctcgttgc gggctacgcc ctcgcggact
     1681 ccaggcgcat cgaggctcca ctggcaagcc ggccggcctg ttgcgcgcgt gtgcaggagc
     1741 catttcgcag cgggttcggc cgctcggctt gacacccctc gcgacctgag gcggcaattc
     1801 catccccttg gcggcttgct acttcgacat cgacggcacc ctcgtccgga cgaacctcgt
     1861 ccagccgacc ctctattacc ttttgaatca ggggacaccg gtgcaaaccg cgctgcgcct
     1921 cggcaaggcg ctcttcaaag cgccgcgcat ggcctacgcg gagatcctgg atcgtcgcac
     1981 gttcaacgag cttttataca gtgcttacgc ggggatgagt gaggaccgcc tcgcgctgct
     2041 cgccgacgag gttttcgatg ccgtgctcag gccggcgctc taccccgctg ctcagggctt
     2101 ggtcgacaag agtcgcgcgg ccggtcacga ggtcgtcttc gtctcgggcg cgctcgattg
     2161 gatcgtgcgg cgagtggcag cgcacttcgg cggcggaggt gtgattgcga accggctcga
     2221 gctcaaagcg ggcatcgcga ccggcaagct cttgaagccc gtcgtcgcgg ggcccgagaa
     2281 ggcgcgcatc gtgcgcgacc atgcgcgcgc tcaggggtac gacctcgacg aatgtttcgc
     2341 tttcagcgac agctattcgg acgtgccgat gctgagcgtc gtcggccacc cggcggccgt
     2401 gaaccccgac aagcgcctcg cgctcctcgc caaggcctac tcctggcccc tgttcgattt
     2461 gacgctgccg gcttgagccg cagcaccgcg ccgatatccc gagccccatg aatcatccgt
     2521 gtctagtcac cctcgagcgc gatagcgcgc cgcgcactct cttttccggc gatcgactgg
     2581 tcgaagtcga tctgcccgta ggaacgcgcg tcatctaccc gaaacctccg ctcgagccgc
     2641 tccgcgatcc cgacgccgcg atccgctacg cgttgaacca tccgctcggg ggcgatccgc
     2701 tgcatgcgcg cctgcgcccg ggcatgaagg tgacgatcgc ggtcgacgac atctcgctgc
     2761 cgctgccgcc catgcgccgg cccgacgtgc gcgagcgcgt cgtgacgatc gtgctcgagc
     2821 tgctcgccga tcacggggtc gaggacatcg agatcatcgt ggcgacgggc gtgcaccgcc
     2881 gcatgaaggc gcacgagatc cggcacatgc tcggcgatcg catcttcgac gcctactacc
     2941 cggatcgttt gtacaaccac gacgcggagg acagcgcgaa tctggtcgag atcgggcgca
     3001 cgccgcgcgg cgaagtgctc gagctgaacc gccgcgccgc cgagagcgac ctcctcattt
     3061 acgcgaacct gaactacgtg ccgatgaacg gcggctacaa gtcggtcgcc gtcggcctca
     3121 ccggctatcg cagcctgcga ccccatcaca acccgcactc gatccggcag tcggacagct
     3181 acatggatcc ggcgcgctcg gagctcgcgc gggacatcga gcgcatgggg cggctcgcgc
     3241 acgagaagct gccgatcttc acgatcgaga ccacgatcaa caaccgcatg ttcgaccgct
     3301 cgctcgagtt tctcgtcaag aacgaggacg agctcagcgc gcgcgagcga gcgatgctga
     3361 aggcgctcgt catctcgacg gccaaattgc cacagccggc gcgtcacgcg attttcgaca
     3421 agtttcctgc gccgtacggc atgaccggcg tgtgggcggg cgacgtggag ctcgtgcacg
     3481 agcgctcggt cgcgcgcaat ttcgagcagt actgcgtgcc gatcgagggc caggcggacg
     3541 tgctcgtgta cggcgtgccg tacatcagcc cctacaacgt gcacgcgttc ttgaatccgc
     3601 tgctcgtgca ggtgctcgcg caggggtatc tgttcaacat gtaccgcggc gctcccctcg
     3661 tgaagaaggg cggcacgttg attttgctgc acccgtgcac cgacaagttc gatcacgagc
     3721 agcacgcgtc gtacatcgac ttcgtgcacc ggctcttgcc cgagacgcgc gacgccgtgc
     3781 tcttgcgcga gcggtacgaa gagaagtacg cccgcgatcc ggcgctcgtg cagatgtacc
     3841 gcacgggcca cgcgtaccat ccgtcgcacc cgttcttcat gtggtactgg ggcgagaacg
     3901 ggcggcagca cctcgggcgc gtgatcgtgg tcggcgccga caacgaatac atcccgaagc
     3961 tcttcggctg ggaaacggcg ccgaacatgg aggatgcgct ctatcgcgcc aagggcgggg
     4021 agaaccgctc actcagcgtg acggccctgc acgtcccgcc cgtgatcatg ggcgacgtga
     4081 cgcttccggg aggcggcggt tgagcacgaa cggctcgtcc aacggttcga acggcgcgca
     4141 cgcaccgaac ggcgtgcacg cgccgaacgg cgcggcacac ggctgggact cggcgcacgc
     4201 agctggcagt ttggccgcag tgtccgcggg cgcaacgctc gacctcgaag cgctcttcgc
     4261 cggcaagcgt ttcgtcgtgg tcggcggcac cggttacctc ggcaagacgt ggtggtcgtt
     4321 cttgctcgcc cactggccga gcgtcgagca cctctatttg ctcgtgcgcg aaaagggcaa
     4381 gcagagcgcc gaagaacgct tctggcagga gatcgtgccg acggcggtgt tcgatcccct
     4441 gcgcgcggcc tacggcgagc gcttcgaagc gttcattcgc gagaaggtga cgcccgtcgc
     4501 gggcgacgtc gtgcggccgt tctgcgggct cgcgcccgat ttgcgcgccg atctgcgcgg
     4561 ctcgatcgcc gccgtcgtca acgccgcggg cgtcgtcgat ttcgatccgc cgctcgacga
     4621 ggcgctcgag gtgaacgcgt tcggcgtgca gaacctggtc gcgctcgcgc gtgatctcgg
     4681 cgacttgccg ctcttgcaca cgagcacctg ctacgtcgcc ggcagccgca cgggtcacgt
     4741 gcacgaagcc agcccgctcg agtttccgtt cccgcgcgcc gacgagctcg agcgcacgca
     4801 ttgggatccc gatcgcgaga tcgccgaatg cctcgacgtg atcgagcagg cgcgccaccg
     4861 cggcagcgac gcgttccgcc agagtcgttt cctcgacgag gcgaagaaga acctcgcgga
     4921 acgcagtgag cccgcgcgcg ggcgcgtgct cgaggccgaa gtcggcaagg tgcgccgcaa
     4981 gttcgtggag gcgcgcctgg ccgagaccgg catggaacgc gcccaatttt ggggctttcc
     5041 gaatacgtac acctacacca aggccatcgg cgagcagatc gtcgcgcgct cgggcctagc
     5101 gttcacgatc gtgcggcccg cgatcgtcga gtcatcgctc tcttacccga tgcccggctg
     5161 gaacgaaggc atcaacacga gcgcgccgct catctacatc ctgcgcgaag gcgggcttca
     5221 aatcccgggc tccgatcact tcctcgactt cgtgccggta gacatggtgg ccggcgggat
     5281 gtgcgtcgcg ctcggcgagc tcgtgcaagg cacggccaag gccgtgtatc aactcggctc
     5341 gtccgattcg aacccgtgca cgatgcgccg gttcttcgag ctcacggggc tgtacaagcg
     5401 caagtactac caacgcaccc tgcgcggcgg gccgctcctc gcgtatgtgc aggcgcactt
     5461 cgagggggcg ctactttcgc gcacacaatt cgagagctac gggccgaaga aaatcgcgag
     5521 cggcgcgcgg caggtgaagg gactgctcga acgcgtgaaa gcgctcggcg cggggacttc
     5581 cctgctcgag ccggcggcgg aggcgatcga gaagtttgcg cgcca
//
LOCUS       DATIML010000995         2377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4836654, whole genome shotgun sequence.
ACCESSION   DATIML010000995 DATIML010000000
VERSION     DATIML010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4836654"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VLJ38_17200"
     CDS             complement(<1..392)
                     /locus_tag="VLJ38_17200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU41319.1"
                     /translation="MSKRILITGGAGFIGSHLTDELIAHGYAVRILDSLARQVHGDRA
                     GRPEYLDGRAELVVGDVRDRSAVENALDGVEAVVHLAAAVGVGQSMYQIREYVDVNAV
                     GTAVLLEAIAKRPVRKLVVASSMSIYGEG"
     gene            731..1477
                     /locus_tag="VLJ38_17205"
     CDS             731..1477
                     /locus_tag="VLJ38_17205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSU41320.1"
                     /translation="MWGIVPAAGRGSRLQPLAFSKELLPVGSRSDGGNERPVAVSEYI
                     VERMLLAGVTKLCFVIGRGKSDVVEYFGQHVRGASVCYVVQEEPRGLCDALFRPLPFI
                     HDEERICFGLPDTIWFPENALRHVTEKPLDFLLFPVDRPELFDAVECDDAGNVLRMEV
                     KARAARSRWIWGAFGMDGRTLRALYELWCARERRDEYLGTLVNAYLEKGGTAHAVPAG
                     EKYVDVGTLNGYREATHLLERRRSAGALDL"
     gene            1474..2091
                     /locus_tag="VLJ38_17210"
     CDS             1474..2091
                     /locus_tag="VLJ38_17210"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSU41321.1"
                     /translation="MTATTFFLVRHGTTDAVGQRLVGRHPDVPLNAAGRAQCERVATF
                     LAGLPLAAVYSSPLERAAHTAQAVARPHGLEVRVREALIDIEFGEWSNETLAALRDRP
                     EFRRFNAQRAGHAPPGGEHPALVQARMVTELCRLRDAHPGGAVAVVGHADPLRAALAF
                     FLGVAIDLARRLELDPACVTRLELSDTDASLRFLNCQPTATPLVL"
     gene            2088..>2377
                     /locus_tag="VLJ38_17215"
     CDS             2088..>2377
                     /locus_tag="VLJ38_17215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41322.1"
                     /translation="MKPLEAPVSDYTPSELVGHFRVERTAGFLPPLHFAKRIDANGRG
                     VTSILGLPLFPFHIDATGATPPACVLRYVALPVRDELVLTPDGWNGRGLIFGL"
BASE COUNT          376 a          823 c          780 g          398 t
ORIGIN      
        1 ccctcgccgt aaatgctcat gctcgaagcg acgacgagct tccgcaccgg ccgtttggcg
       61 atggcctcga gcagcacggc ggtgccgacc gcgttcacgt ccacgtactc gcggatctga
      121 tacatgctct gaccgacgcc gaccgcggcg gcgaggtgca cgacggcctc gacgccgtcg
      181 agcgcgtttt cgacggcgct cctgtcgcgc acgtcgccga ccacgagctc ggcccgaccg
      241 tcgagatact caggtcggcc cgcgcggtcg ccgtgaacct gtcgtgcgag actgtcgaga
      301 atgcgcaccg cgtagccgtg cgcgatgagc tcgtcagtca ggtgcgaacc aatgaaacca
      361 gcgccgcccg tgatcagaat ccgcttcgac atctgcacgc tccagctacg gtgttcatgc
      421 cagccacgtt ctgcacccgc taccgagcct gtcaattggg tgatttcacg cacttccgcg
      481 cgttggcaat ctgccccgcc cgtgttgggg catatcgcgc agcagcgtga ccaagtgcgc
      541 tcggcgcgtt cgcgcgcgac acgttccgcg acgaaattgc gccaaaaaat cacgcttgca
      601 cgccgatcaa aatatcgcga gcgctggttg acaagcaccc cggcgatcgc aagaacaagc
      661 gccatgcgcg atgagacaca gcacgtttcg accgagcgcg gcgccgccgc gagcgcgaga
      721 gggtaacgcg atgtggggca tcgttcccgc cgcgggtcgc ggcagccgcc ttcaaccgct
      781 cgctttttcc aaggagctat tgccggtcgg tagccgcagc gacggcggca acgagcgacc
      841 ggtcgccgtg agcgaataca tcgtcgagcg catgctgctc gccggggtga ccaagctctg
      901 cttcgtgatc gggcgcggca agagcgacgt ggtcgagtac ttcggccagc acgtgcgcgg
      961 cgcgagcgtc tgctacgtcg tgcaagagga gccgcgcggg ctgtgtgacg ccttgtttcg
     1021 cccgctgccg ttcatccacg acgaggagcg gatctgcttc ggcttgcccg acacgatttg
     1081 gtttccggaa aatgcgctcc gccacgtcac ggaaaaaccg ctcgatttcc tgctatttcc
     1141 cgtggatcgc cccgagctct tcgatgccgt cgagtgcgac gacgccggca acgtgctgcg
     1201 aatggaagtg aaagcacgcg cagcgcgcag ccgctggatc tggggcgcct tcggcatgga
     1261 cggacgcacc ttgcgcgccc tctacgagct ctggtgcgct cgcgagcgcc gcgacgaata
     1321 cctcggcacg ctcgtcaacg cgtacctcga gaagggcggc accgcgcacg ccgtgcccgc
     1381 gggtgaaaag tacgtcgacg tgggcacgct caacggctac cgcgaggcga cgcacctgct
     1441 cgagcgcagg cggagcgcgg gagcgctcga cctgtgacgg ccaccacgtt cttcctcgtg
     1501 cggcacggca ccacggacgc ggtcggacag cgcctggtcg gccggcatcc cgacgtgccg
     1561 ctcaacgcgg cggggcgcgc ccagtgcgag cgggtggcga cgttcctcgc gggcctgccg
     1621 ctggccgccg tgtattcgag tccgctcgaa cgggccgcgc acacggccca ggccgtcgca
     1681 cgtccgcacg gcctcgaagt gcgggtgcgc gaagcgctga tcgatatcga gttcggcgag
     1741 tggagcaacg agacgctggc ggccctgcgc gatcggccag agtttcggcg attcaacgcg
     1801 cagcgcgccg gccacgcgcc tcccggcggc gagcatcccg cgctcgttca ggcgcgcatg
     1861 gtgaccgagc tttgccgcct gcgcgatgcg cacccgggcg gggcggtggc ggtcgtcgga
     1921 cacgccgatc ctttgcgcgc cgcgctcgca tttttcctcg gcgtggcgat cgatctcgcg
     1981 cgccggctcg agctcgatcc ggcgtgcgtg acgcgcctgg agctcagtga caccgacgcg
     2041 agtctgcgtt ttctcaactg ccaacccacg gccaccccgc tcgtcctgtg aagccgctcg
     2101 aagctcccgt cagcgactac accccgagtg agctcgtcgg tcattttcgt gtcgaacgaa
     2161 cggcgggatt tcttccgccg ctgcacttcg cgaagcgcat cgacgcgaac ggccgtggcg
     2221 tcacctcgat cttgggactg ccgctgtttc cgttccacat cgacgccaca ggagcgacgc
     2281 cccccgcgtg tgttctccgt tacgtcgcgc tgcccgtgcg tgatgaactg gtgctcacgc
     2341 cggacggttg gaacgggcgc ggactgatct tcggtct
//
LOCUS       DATIML010000996         2084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2521830, whole genome shotgun sequence.
ACCESSION   DATIML010000996 DATIML010000000
VERSION     DATIML010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521830"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..>2084)
                     /locus_tag="VLJ38_17220"
     CDS             complement(30..>2084)
                     /locus_tag="VLJ38_17220"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HSU41323.1"
                     /translation="VASGDPRATSVVLWTRVVDPEHASSDLTLELVVATDAALKNVVE
                     LQGGGAYPIVAQAAAGGCVKVRVEGLTPSTTYYYRFTLLQGGERYASHTGRTRTAPEP
                     DADTPVSFAVVSCQDFGGKYYHAYRHLAEQELDFVLHLGDYIYETIDDPSFQGSSPER
                     SVKFSAPSEALALDMSSGLAAPASDAEPVLAARSLGNYRDLYRTYRADPDLQRVHERF
                     PMVALPDDHEFSNDCYGASGTYTSDRENEEDLTRRRAADQAWFEYMPIDYSEPPASAL
                     DANGAFPADFRVYRSFVFGRHLELVLSDLRRYRPDHVVPESAFPGAVFMTDTEAKTLL
                     GAVPDDLIATVDIDGEDVTDVRALLLAVAEASGFTPDAITGLLSVPWINRTLVAAGEA
                     APLDETDGAHGRGYAFHQLLKSAQFSEQGSRYLVAERAFRAYASKRLGETDGASERLM
                     GDEQRAWFTSTLAASTRTWKVWGNEYGLMRRAIDLTGVTVAPAEFQQRLLLTAEDWDG
                     APNERNALLSELRSVENLVVVTGDLHAFFAGTPYAENDVNTRVIELIAGSISSATWLA
                     SIRQVIAADPSLPPQVALLAELVGALLTDTDSRANPHIGWLDLESNGYAVLSLGPDEL
                     GMTAYTLPAVLVTSPPKSLSAPLDTLVTATQFRVQAGSRELEQLLGGIWKRWDRDHMS
                     WV"
BASE COUNT          343 a          683 c          723 g          335 t
ORIGIN      
        1 gtgccagcat gctggccccg tgccggcgct caaacccagc tcatgtggtc gcgatcccag
       61 cgtttccata tgccgccgag cagctgttcg agctcgcgtg agcctgcttg gacgcggaat
      121 tgcgtcgcgg tcacgagcgt gtcgagcggc gccgagagcg acttcggcgg cgacgtgacg
      181 agcactgccg gcagcgtgta cgccgtcatg ccgagctcgt ccggacccag actgaggacg
      241 gcgtagccgt tgctctcgag atcgagccag ccgatatgtg ggttcgcgcg gctgtccgtg
      301 tcggtcagga gcgcgcccac gagctcggcg agcagcgcga cttggggcgg cagcgacgga
      361 tccgccgcga tgacttgccg gatggaagcg agccaggtgg cggaagaaat gctgcccgcg
      421 atgagctcga tcacgcgggt gttcacgtcg ttttcggcgt acggcgtgcc ggcgaagaag
      481 gcgtgcaagt cgcccgtcac gaccaccagg ttttcgacgc tgcggagctc gctcaaaagc
      541 gcgtttcgct cgttcggcgc gccgtcccaa tcttcagccg tgagcagcag ccgctgctga
      601 aattcggcgg gcgcgacagt cacgcccgtg agatcgatgg cgcgtcgcat gagaccgtac
      661 tcgttgcccc acaccttcca ggtgcgcgtc gaggcggcga gggtgctcgt gaaccaggcg
      721 cgctgctcgt cgcccatcaa gcgctcgctc gcgccgtccg tctcgccgag gcgcttgctc
      781 gcgtaggcgc gaaaagcgcg ctcggcgacg aggtagcgcg aaccttgctc ggaaaattgc
      841 gccgatttga gcaactggtg gaaggcgtag ccgcgcccgt gcgcgccgtc cgtctcgtcg
      901 agcggcgccg cttcgcccgc ggcgacgagc gtgcgattga tccacggcac ggagagcagg
      961 cccgtaatcg cgtcgggcgt gaaaccgctc gcttccgcca cggcgaggag cagcgcgcgc
     1021 acgtccgtca cgtcctcgcc gtcgatgtcg accgtcgcga tcaaatcgtc cggcacggcg
     1081 ccgagcagcg tcttcgcctc ggtgtcggtc atgaacacgg cgccgggaaa ggcgctctcg
     1141 ggcacgacgt ggtcaggacg ataacgccgg aggtcgctca gcacgagctc gaggtggcgg
     1201 ccgaagacga aactacgata cacgcgaaag tcggcaggaa acgcgccgtt cgcgtccagc
     1261 gcgctcgcgg gcggctccga gtaatcgatg ggcatgtatt cgaaccatgc ttggtcggcg
     1321 gcgcgccggc gcgtcaggtc ctcttcgttc tcgcgatcgc tcgtgtacgt gccggacgcg
     1381 ccgtagcaat cgttcgagaa ctcgtgatcg tccggaagcg cgaccatcgg gaaacgctcg
     1441 tgcacgcgct gcaaatccgg atcggcgcgg tacgttcgat aaaggtcgcg gtagttgccg
     1501 agcgaacgcg cagcgagcac cggctccgca tcactcgccg gcgcggcgag ccccgagctc
     1561 atgtcgagcg cgagcgcttc gctcggcgcg ctgaacttca cgctgcgctc gggtgacgag
     1621 ccctgaaacg acggatcgtc gatggtctcg taaatgtagt cgccgaggtg caagacgaaa
     1681 tcgagctctt gctccgcgag gtggcggtac gcgtggtagt atttcccgcc gaaatcctgg
     1741 caagaaacga ccgcgaacga gacgggcgtg tccgcgtcgg gctcgggcgc cgtccgcgtg
     1801 cggcccgtgt gcgaggcgta gcgctcgccg ccctgaagca gggtgaagcg atagtaatag
     1861 gtcgtgctcg gcgtgaggcc ctcgacgcgc accttcacgc agcccccggc cgccgcctga
     1921 gcgacgatgg gatacgcgcc gccaccttga agctcgacca cgttcttcag cgctgcgtcc
     1981 gtcgcgacga cgagctcgag cgttagatcg gacgacgcgt gctcggggtc gaccacgcgc
     2041 gtccagagca cgacgctcgt cgcgcgcgga tcgcccgacg cgac
//
LOCUS       DATIML010000997         7334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1950721, whole genome shotgun sequence.
ACCESSION   DATIML010000997 DATIML010000000
VERSION     DATIML010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7334
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950721"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..756)
                     /locus_tag="VLJ38_17225"
     CDS             complement(<1..756)
                     /locus_tag="VLJ38_17225"
                     /EC_number="2.3.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008791 - arginine N-succinyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HSU41324.1"
                     /translation="MESQIKHEIRGALLSDEEALLALARHLNSVNLPNDRDHVRRLLE
                     HSEKSFRGEVPERKRKFVFLICDRASGAALGTSTIIAQLGRRDAPYIYLDVIDEEKYS
                     SALDRHFHHTVLRIGFSYDGPTELGGLVVAPKHRSAPERFGRLISYVRFVYITEHRAL
                     FREQLLAELLPPLEPDGTSHLWEAFGRRFTGMSYAEADRLSSENKSFIRDLFPSGSVY
                     ASLLSDDARSVIGKVGAQTKGVEKMLRRVGFRYA"
     gene            991..2214
                     /locus_tag="VLJ38_17230"
     CDS             991..2214
                     /locus_tag="VLJ38_17230"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSU41325.1"
                     /translation="MLSWPFPRAENLPTYGFVITDAVKARVRATGADIIDLGLGNPDR
                     PTPGPIVERLLETAVIGKNHRYHPGRGLLPLREAAAAWYEKRYGVRFDVEQELVITMG
                     AKEGMSNLCLAILDRGDLALAPDPCYPIHAGAPRIAGADVELYRASLDIAPADAVAES
                     IARAEKSGRRVKLVIANYPQNPTGQVISREQMGALVRVVQRSGAMLLHDLAYADFDFA
                     SRHAPSIFDCGVPADEVKAFAVETFSMSKSYNMPGWRIAFMAGNARLVGALAHLKTYL
                     DYGTFAPLQYAAAWALEHGDVFAEELRELYLRRAHALVGGLRQAGWEGVTEPSGTMFV
                     WAKVPRALSQKGSLDATTRLIEQAHVAVAPGVGFGPGGDGHVRFALIEDPPRIAEACE
                     RIGRLFAVPRRAAGA"
     gene            2224..3390
                     /locus_tag="VLJ38_17235"
     CDS             2224..3390
                     /locus_tag="VLJ38_17235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41326.1"
                     /translation="MKRAWVLLLALGVACSGKREDDDSAGKAGRGQGATSGAASRVGG
                     SSGSAGATLEAGGRSGSTGGHGAAVSNAGSTNPSGGTDASGGTDASGGTDASGGDAGQ
                     SGSGAGGTDNAATSAGDGGSSGTGDGGGERPLVELLIDGSSSMFENRMWDAVYATLVT
                     HGVLGDFESTLDIGLSVFRGNGASASETSPECATMTDVAVGPPNETAVESALTSIQSD
                     YARRMPRWETPTGFAVNYAAAALAALDVPAGTKKYILLVTDGPPDTCEVAAPQCGQDN
                     AIAAVQAARVLGIHTVVLGLAPFVDSNSGCPTSARCGVDYLQDIANAGAGRPVEPPPD
                     DYQYQPCVIGRALLASYADAGAGGEATYYESGDGSTFGSDLADALARIVDDRVP"
     gene            complement(3457..4032)
                     /locus_tag="VLJ38_17240"
     CDS             complement(3457..4032)
                     /locus_tag="VLJ38_17240"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HSU41327.1"
                     /translation="MAKLNGKRIAIVVTDGFEQVEMTEPKQALEREGAKTVIVSPKEG
                     KVKGWKHTDWGDSFNVEMKLSEARESEFDALLLPGGAMNPDKLRLEPEAVNFVRRFFE
                     AGKPVAAICHGPWLLIDAGVAKGRTVTSWPSIRLDLKNAGANVVDEEVVVDRGLVTSR
                     KPDDIPAFNRKMIEEFAEGTHRTQAAAARHA"
     gene            complement(4162..>7334)
                     /locus_tag="VLJ38_17245"
     CDS             complement(4162..>7334)
                     /locus_tag="VLJ38_17245"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU41328.1"
                     /translation="LSELRPDVPTLVDMLVCRMLETDPSARPSSMREVLDLLGEASRD
                     AARSSWHEPEPSTRSSRLGTSISRLVTTIVGVRFPTPLVRDRALQQLRQRGADAAPIA
                     SDAVVAHLGARRTVGNEAAAALELGRRLARSGARVGIASGRARMSFRPDGDTRPVGEV
                     VDRAAALARDATNGGVLVDATTSELGRGRYEFRARDDGSAIVGEPVRGMRGERSGGAP
                     FVGRDAELAQVLGAFERSRSNSTPLLVSITGAPGIGKSRLRREVMARISALADAPLVV
                     LQRSEAYGQGHALGAAADILRAFVELPKGATRLEAEMAIVSSLGAATRNDLTANNRDL
                     LARLLANEALPAGFDPRGARDALWLAMTELVIQVASEQEVAILVEDLQWADPESIGWL
                     DHMLGRASHKPLVVVACVRPEFWTAGPNRFAGRDHVRIELRPVSKRASRTIARAVLGD
                     AAPEELVERIAQQAAGLPLFAEELARLTATGRSAEQAPTIQAAIQASLDALDEECRDA
                     LGRLSVFGLTCWDSALEALGMPGAEGVIRALVAAEVLVEQNVSRFTGAREWTFKHALV
                     REVAYASLGDAERKQLHGLAATWLAVMGEDAATVAGHFDLGGEHVKAAEHWARAAQRA
                     LAANALKDALSMAERSLAFAEDPPRAFERACYLDEAWSRLDPRSGERESAVHSMERNV
                     FDEASEVRARGARARYDDARGSGEDISRRLAEARDEAARLELSEEEARCSAVLAARLA
                     FAGQFREAEAEARRLLGLAHRGIAYAAVDGYQTLAIVRQTQGALSAALDARRNATSAA
                     RAAGLRERESMLTTNLGFALTTIGARQEARTAIENGLALADAIGSQGAVRHGQMILLG
                     WACTFGTDKAIDAHLAEVRANADAAGSGIWAAPDRANLGLLFYRGCELLRSKVEGSAR
                     RALGLLRMAAQAYRAAGHRDVLPVALGAWSEAERACGNLATALDLAREAVALVEQGAP
                     SLLNESAVFLALYEALVDDGKTDEALEVVRRGIPPIQRRLLGLAGTPYARLFLTDLPA
                     NARLIALAEDEGFLPEVFHRALERTA"
BASE COUNT         1100 a         2452 c         2633 g         1149 t
ORIGIN      
        1 tgcgtagcgg aagccgacac ggcgcagcat cttctcgacg cctttggttt gcgcgccgac
       61 tttgccgatc accgagcgcg cgtcgtcgga gagcagcgag gcgtagacgc tgccgctcgg
      121 aaagagatcg cggatgaacg acttgttttc gctcgagagc cggtcggcct cggcgtagct
      181 catgccggtg aaacgccgtc cgaacgcttc ccagagatgg ctcgtgccgt cgggctcgag
      241 cggcgggagg agctcggcga ggagttgctc gcgaaaaagc gcgcggtgtt cggtgatgta
      301 gacgaagcgc acgtacgaga tgagccggcc gaagcgttcg ggtgcgctcc ggtgcttggg
      361 cgcgaccacg aggcccccga gctccgtcgg gccgtcgtag gagaaaccga tgcggagcac
      421 ggtgtgatga aaatggcgat cgagcgcgct cgagtatttc tcctcgtcga tcacgtcgag
      481 gtagatgtag ggggcgtcgc gccggccgag ctgcgcgatg atggtcgagg tgccgagcgc
      541 ggcgccgctc gcgcggtcgc aaatcaagaa gacgaatttg cgtttgcgct ccggcacctc
      601 gccgcgaaag ctcttctcgc tgtgctcgag cagccgccgc acgtgatcgc gatcgttcgg
      661 caggttcacg ctgttcaggt ggcgggcgag cgcgagcagc gcctcctcgt ccgacaggag
      721 cgcgccgcgg atttcgtgtt tgatctggct ttccaaagac tgctcgagtc gaggctggga
      781 tcgagagctt tgtcggatcg gggcccgcgt cgccaagttc tccgccgtcg gctggaacgg
      841 ctccggtcgg tgggccggct caacgcacgg cggtcgccgc tacacactcc taactacgca
      901 gcggagctcg gtttttgtgg tgcaggcgcg agctttgcgc ccggatcccg gcaactcgcc
      961 cgaaactttc gtgataaacg agccggcccc atgctgtctt ggccttttcc gcgtgccgaa
     1021 aaccttccca cctacggctt cgtgatcacc gacgccgtca aggcccgggt tcgtgcgacg
     1081 ggcgccgaca tcatcgatct cggtctcggc aatccggacc gtccgacgcc gggcccgatc
     1141 gtcgagcggc tgctcgagac cgcggtcatc ggcaagaacc atcgctacca cccgggacgc
     1201 ggcctcttgc cgctgcgtga ggcggccgca gcttggtacg aaaagcgcta cggcgtgcgt
     1261 ttcgacgtcg agcaagagct cgtgatcacg atgggcgcca aggagggcat gagcaatctc
     1321 tgcctcgcga tcctcgatcg cggcgacctc gcgctcgcgc cggatccctg ttacccgatt
     1381 cacgctggcg cgccgcgcat cgcgggcgcc gacgtggagc tctatcgcgc gtcgctcgat
     1441 atcgcgcccg cggacgccgt cgccgagagc atcgcgcgcg ccgagaagag cgggcgccgc
     1501 gtgaagctcg tgatcgccaa ttacccgcag aacccgacgg ggcaggtgat ttcgcgcgag
     1561 cagatggggg cgctcgtgcg cgtcgtgcag cgctcgggcg cgatgctgct ccacgatctg
     1621 gcgtacgcgg acttcgactt cgcttcgcgc cacgcgccga gcattttcga ctgcggagtg
     1681 cccgcggacg aggtgaaggc ttttgcggtc gagacgttct cgatgtccaa gagctacaac
     1741 atgcccggct ggcgcatcgc gttcatggcg ggcaacgcgc ggctcgtggg cgcgctcgcg
     1801 cacctgaaaa cgtacctcga ttacggtacg ttcgcgccgc tgcagtacgc ggcggcgtgg
     1861 gcgctcgagc atggcgacgt cttcgcggag gagctgcgtg agctctacct gcgccgcgcg
     1921 cacgcgctcg tgggcgggct gcgccaggcg gggtgggagg gcgtcacgga accgagcggc
     1981 acgatgttcg tctgggcaaa ggtcccgcgc gcgctgtcgc aaaagggttc cctcgacgcg
     2041 acgacgcgcc tcatcgagca ggcgcacgtc gcggtcgcgc cgggggtcgg cttcggtccg
     2101 ggcggcgacg gtcacgtgcg cttcgcgttg atcgaggatc cgcctcgcat cgccgaggca
     2161 tgcgagcgca tcggccggct cttcgccgtt ccgcggcgtg ctgcgggcgc gtgacgatcg
     2221 acgatgaaac gagcttgggt tttgctgttg gcgctcggtg tcgcttgctc gggcaagcgc
     2281 gaggacgacg actccgccgg caaggcggga cgaggtcaag gcgctacttc gggtgctgcg
     2341 agccgtgtcg ggggttcgag cggatcagcg ggggcgacgc ttgaagcagg cggacgctcg
     2401 ggttcgacgg gcggacacgg tgcagcggtt agcaatgccg gaagcaccaa tccgtctggc
     2461 ggcacggacg catcgggcgg cacggacgca tcgggcggca cggacgcatc cggcggcgat
     2521 gcgggacaga gcgggagcgg tgccggcggc accgacaacg cagccacaag cgcaggtgac
     2581 ggcgggagct ccggaaccgg ggacggcggg ggcgagcgtc ccctggtcga gcttttgatc
     2641 gacggctcgt cgagcatgtt cgaaaatcgc atgtgggatg ccgtgtatgc gacgctcgtg
     2701 acgcacggtg tgctcgggga tttcgagagc actctggaca tcggtctttc ggtgtttcgc
     2761 ggcaacggag cgagcgcgag cgagacgtcg cccgagtgcg ccacgatgac ggacgtggcg
     2821 gtaggcccgc cgaacgagac cgcggtcgag tcggcgctca cgtcgattca aagcgattac
     2881 gcgcgcagga tgccgaggtg ggagacgccg accggcttcg ccgtgaacta cgcggccgca
     2941 gcgcttgccg cgctcgacgt ccccgcggga accaagaagt acatcttgct cgtgacggat
     3001 ggaccgccgg acacgtgtga agtcgcggcc ccgcagtgtg gacaggacaa cgcgatcgcc
     3061 gccgtgcagg ccgcccgtgt gctgggcatc cataccgtgg tgctcgggct cgcgccgttc
     3121 gtcgatagca acagcggctg tcctacttcg gcgcggtgcg gtgtggatta tttgcaagat
     3181 atcgccaatg cgggcgccgg caggcccgtc gagcccccgc ccgacgacta tcaatatcag
     3241 ccgtgcgtca tcggtcgcgc gctgctcgcc agttacgccg acgccggggc tggcggtgag
     3301 gcgacgtact acgagagcgg cgacggcagc acgttcggga gcgatctcgc ggacgcgctc
     3361 gcgaggatcg tcgacgaccg cgtgccgtga gtacagctgt cggcgcgccc gaaccatgcg
     3421 gttcgagcgc gcgtccccaa atcgtccggc tctcgctcag gcgtgacgcg ccgcggccgc
     3481 ctgcgtgcgg tgcgttccct cggcgaactc ctcgatcatt ttgcgattga acgccggaat
     3541 gtcgtccggc ttgcggctcg tgacgagccc acgatcgacg acgacttcct catcgacgac
     3601 gttcgcgcca gcgttcttca aatccaaccg aatcgacggc caagacgtca ccgtgcggcc
     3661 cttcgcgacg cccgcgtcga tgagcaacca cgggccatga cagatcgccg cgacgggttt
     3721 gccggcctcg aagaagcggc gcacgaagtt cacggcttcg ggctcgaggc gcagcttgtc
     3781 gggattcatg gcgccgcccg gcaagagcag cgcgtcgaat tcggactcgc gcgcctccga
     3841 gagcttcatc tcgacgttga agctgtcgcc ccagtcggtg tgcttccagc ctttcacctt
     3901 gccctctttg ggcgagacga tgacggtctt cgcgccttct cgctcgagtg cctgcttcgg
     3961 ctcggtcatt tcgacttgtt cgaagccgtc cgtcacgacg atagcgatgc gttttccgtt
     4021 gagcttggcc atgccctcgt tcgagcaagg gccgcgccgc gcggcggcca acctaaacgg
     4081 atacgctgca gttcagagcg acctccgcgc gaacgcgcca cggtgaggcg tccaggtccg
     4141 tgccgaatgg cacgccaacg gtcaggccgt tcgctcgagg gcgcggtgga agacttcagg
     4201 caggaagcct tcgtcttcgg cgagcgcgat gagtcgcgcg ttcgcaggca aatcggtgag
     4261 gaacagccgc gcgtaggggg tgccggcgag gccgagcaaa cggcgttgga tcggagggat
     4321 gccgcggcgg acgacctcga gcgcttcgtc cgtcttgccg tcgtcgacga gcgcctcgta
     4381 cagcgcgaga aaaacagccg attcgttgag taagctcggc gcgccctgct cgacgagcgc
     4441 gaccgcttcg cgcgcgagat cgagcgccgt cgcgaggttg ccgcaggcgc gctccgcttc
     4501 cgaccatgcg ccgagcgcga cgggcaggac atcgcgatga ccggccgcgc gatacgcctg
     4561 cgccgccatg cgcaagaggc cgagcgcgcg ccgcgccgag ccttccacct tggagcgcag
     4621 gagctcgcag ccgcgataaa agagcaggcc gaggttcgcg cggtccggcg ccgcccaaat
     4681 gcccgagccc gcagcgtcgg cgttcgcgcg cacttcggcg aggtgggcgt cgatggcttt
     4741 gtcggtgccg aacgtgcagg cccagccgag taggatcatc tgaccgtggc gcacggcgcc
     4801 ttggctgccg atggcgtccg cgagcgcgag tccgttttcg atcgccgtgc gcgcttcctg
     4861 acgggcaccg atggtcgtga gcgcaaaacc gaggttcgtc gtcagcatcg actctcgttc
     4921 gcgcaggccc gccgcgcgcg cggccgaggt ggcgttgcgg cgcgcgtcga gcgccgcgct
     4981 gagcgcgcct tgcgtctggc gcacgatcgc gagcgtctgg tagccgtcga cggcggcgta
     5041 ggcgatgccg cggtgcgcga ggccgagcag gcggcgcgct tcggcttccg cctccctgaa
     5101 ttgtccggcg aaggccagac gcgcggcgag cacggccgag cagcgagcct cttcttccga
     5161 aagctcgagg cgtgcggctt cgtcgcgcgc ttcggccaga cgccggctga tgtcctcacc
     5221 cgagccgcgc gcgtcgtcgt agcgcgcgcg cgcgccgcga gcccggacct cgctcgcctc
     5281 gtcgaaaacg ttgcgttcca tcgaatgcac ggcgctctcg cgctcgcccg aacgtggatc
     5341 gagccggctc caagcctcgt cgaggtagca ggcgcgctcg aacgcgcgcg gcggatcctc
     5401 ggcgaatgcg agcgagcgct cggccatgct gagcgcgtct ttcaacgcgt tcgcggcgag
     5461 cgcgcgctgc gcggcgcgcg cccagtgctc ggcggctttg acgtgctcgc cccccaggtc
     5521 gaagtggccc gcgaccgtgg ccgcgtcttc gcccatcacg gcgagccagg tcgccgcaag
     5581 gccatgcagc tgcttgcgtt cggcgtcgcc gagcgatgcg tacgcgacct cgcgtacgag
     5641 cgcgtgcttg aacgtccact cacgcgcccc cgtgaagcgc gacacgtttt gctcgacgag
     5701 cacttcggcc gcgacgagcg cacgaattac gccttcggcg cccggcatgc cgagcgcctc
     5761 gagcgcggaa tcccagcagg tgaggccgaa cacgctgagg cgcccgagcg cgtcgcggca
     5821 ttcttcgtcg agcgcgtcga ggctcgcctg gatggcggcc tggatcgtcg gcgcttgctc
     5881 ggcggagcgc ccggtcgccg tcaagcgcgc gagctcctcg gcaaagagcg gcaaccccgc
     5941 ggcctgctgc gcgatgcgct cgacgagctc ttcgggtgcg gcatcgccga gcacggcgcg
     6001 cgcgatcgtg cgcgaggcgc gcttggaaac cggccggagc tcgatgcgca cgtgatcgcg
     6061 cccggcgaag cggttcggcc ccgccgtcca gaattcgggc cgcacgcagg cgacgacgac
     6121 gagcggcttg tggctcgcgc gaccgagcat gtggtcgagc cagccgatgc tctccggatc
     6181 cgcccactgc aaatcctcga ccaggatcgc gacctcctgc tcggaggcga cctggatcac
     6241 gagctcggtc atggcgagcc agagtgcgtc gcgggcgcca cgcgggtcga agccggcggg
     6301 cagcgcttcg ttcgcgagca ggcgcgccaa gaggtcgcgg ttgttcgccg tgagatcgtt
     6361 gcgcgtggcg gctccgaggc tcgagacgat cgccatttcg gcttcgagcc gcgtcgcgcc
     6421 cttcggcaac tcgacgaacg cgcgcaggat gtcggccgcg gcgccgagcg cgtggccctg
     6481 gccgtacgct tccgaacgct ggagcacgac gagcggcgcg tcggcgagcg cgctgatgcg
     6541 cgccatcact tcgcgccgga gccggctctt gccgatgccc ggggcgcccg tgatgctcac
     6601 gagcagcggg gtcgagttgc tgcgcgaccg ctcgaaggcg ccgagcactt gcgcgagctc
     6661 ggcgtcacgg cccacgaacg gcgcgccgcc cgagcgctcg ccgcgcatgc cgcgcaccgg
     6721 ttcgcccacg atggcggagc cgtcgtcgcg ggcacgaaat tcgtaacggc cgcgtccgag
     6781 ctcgctcgtg gtcgcatcga cgagcacgcc gccgttggtg gcgtcgcgcg cgagcgcggc
     6841 ggcgcggtcc acgacttcgc ccacgggacg cgtgtcgccg tcggggcgga agctcatgcg
     6901 cgcgcggccg ctcgcgatgc cgacacgcgc gcccgagcga gcgagcctgc gtccgagctc
     6961 gagcgcggcg gcggcttcgt tgccgacggt gcgccgcgca ccgagatgcg cgaccacggc
     7021 gtcggacgcg atgggtgctg catcggcgcc gcgctggcgg agctgctgga gggcgcgatc
     7081 gcgcacgagc ggcgtcggaa agcgcacgcc cacgatcgtc gtcacgagtc gcgaaatgct
     7141 cgtgccgagc cgcgacgaac gcgtcgacgg ttccggctcg tgccagctcg aacgcgcagc
     7201 gtcgcgcgaa gcctcgccga gcaggtcgag cacctcacgc atcgagctcg gccgcgcgga
     7261 gggatcggtc tcgagcatgc gacagaccag catgtccacg agcgtcggca cgtcggggcg
     7321 gagctcggat aagc
//
LOCUS       DATIML010000998         3223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1659772, whole genome shotgun sequence.
ACCESSION   DATIML010000998 DATIML010000000
VERSION     DATIML010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659772"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /locus_tag="VLJ38_17250"
     CDS             <1..509
                     /locus_tag="VLJ38_17250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HSU41329.1"
                     /translation="AIVFTFGFSTAPSPVGKVIAGIGEARTLGYKSHGAAGMLTLFIR
                     GVLCNWMVSSGVVGALVSRTVGGKVIAMWLPITLFFGMAFEHSVVNMFLFPSALMMGG
                     HFKISDYIIWNELPTVIGNLVGGITFTGLALYSTHAKTAPKRVVVDTSIDESGIGTRS
                     DARDDAAA"
     gene            1342..2373
                     /locus_tag="VLJ38_17255"
     CDS             1342..2373
                     /locus_tag="VLJ38_17255"
                     /inference="COORDINATES: protein motif:HMM:NF019140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSU41330.1"
                     /translation="MAAAAVVGFEDVHTAVSWRRAHEELVRLSAKRAGLDFEEGRWLL
                     RAFRSGAHRELGYGCFHEYTERLFGYGPRLTQEKLRVAEALEALPETAEELKVGTLSF
                     SAVRELTRVAVPATERDWLRAARGRTVREVEELVSGHRAGSRPGDVPDASARQVSPEA
                     VEMAECDAQHLGHLETSVEAGAHAGTHVGTTKKPARATQTIPPALRRQVLRRDGGRCQ
                     VPGCRHATFVDVHHLRPRSEGGANTIENLVTLCGAHHRASHAGKLSSTGTPSEGLRFL
                     HADGTPYGHAPSPAIAELRTRAYRALTHLGFRESEANLALARAPLTPNLTLEDIIRQT
                     LRALARDRH"
     gene            complement(2717..3190)
                     /locus_tag="VLJ38_17260"
     CDS             complement(2717..3190)
                     /locus_tag="VLJ38_17260"
                     /inference="COORDINATES: protein motif:HMM:NF016291.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF533 domain-containing protein"
                     /protein_id="HSU41331.1"
                     /translation="MTEKTPLGRDVYVALAAVGWADGQLDADEADAIVRAAVEEGLEL
                     EAINEIEAATKAPVDLGVIDRKGLSKEDRLYVYGVAVWITRLDGVVSDAERAALGKLA
                     EALKVPEHPRTVVDRIVESVAQQSGDTRPARYDLAALRSIIAERVASAEAKRNQG"
BASE COUNT          504 a         1102 c         1086 g          531 t
ORIGIN      
        1 tggcgatcgt cttcacgttc ggcttctcga cggcgccgag ccccgtgggc aaggtgatcg
       61 ccggcatcgg ggaagcgcgc acgctcgggt acaagtctca cggcgcggcg ggcatgctga
      121 cgctcttcat ccgcggcgtg ctctgcaact ggatggtgtc gagcggcgtc gtaggcgcgc
      181 tcgtctcacg caccgtcggc ggcaaggtca tcgccatgtg gctgccgatc acgctgtttt
      241 tcggcatggc cttcgagcac tccgtcgtca acatgttcct gttcccttcc gcgctcatga
      301 tgggcggcca cttcaagatc tcggactaca tcatctggaa cgagctaccg acggtcatcg
      361 gtaacctcgt cggcggcatc acgttcacgg gcttggcgct ctactccacc cacgccaaga
      421 ccgcgcccaa gcgcgtcgtc gtggacacga gcatcgacga gtccggcatc ggcacgcgct
      481 ccgacgctcg cgacgacgcc gccgcgtgac gtcgcgaatc gcggcgccga gcgctgcaaa
      541 gcgccgcgaa ttcgtgcaga agccgaacga ggggggctcg cggacgctgc aacttcggag
      601 cgagaggtgg gaacctcttc gcgttctact catgactcgt gcggctcccg tcgcgaccgt
      661 gagcgtactc atcggtagcc tttgggcgct cggaagctgc gcgagcgaag tccaacggcc
      721 gctcggagtg gcgcgttcac ttgacgtttt cctgttcgag tatgagctgc ccccgtgcgg
      781 gtgcggcgct gcacgtcctg cgtgctcggc ctccagcctg cgcgcgcagg cgcccgccta
      841 gcgcccgctt cgcgggcgcg ggggcgcggc gataacgggc ggcgtcgggc ggagcgcgaa
      901 agacgcgcgt gaggcgacgg cgcgcggaac tgcacgaggt gcaggcgccg tgaatagacg
      961 cgcaatgagc taagtggaac tcggccggcg agcacacgcc gaacgcccga tcccgtcgcc
     1021 gggtaaggct attccgctcc acgccgcgaa gacgcccgag cctttgggtt gtggtgttgc
     1081 agcgacctcg cgcaggggct gaaacgcagg tggtccgtcg atttgtgtgg acacgtttcg
     1141 gccgacgacg tctgcacgtc ccttcgacga ggtctgaata gcgtcgtcgc gctcgtctgt
     1201 tcgatggagc gcgcgtttcg cggcgccgac gtttcgaccg cggtccgagg ccgagaaacg
     1261 cgcgcagcgc ggggcacgcg aagccgaaaa actgcgtgat acagatcgtg cgactcagaa
     1321 gcacgagcag ggagggttga gatggcagca gcagcggtgg tcggattcga ggacgttcat
     1381 acggccgtct cttggcggcg cgctcacgaa gagctcgttc gactctcggc gaaacgcgca
     1441 gggctggatt tcgaggaagg gcgctggctg ctgcgggcct tccgctcggg agcccatcgc
     1501 gagctcggat acggctgctt tcacgagtac accgagcggc tcttcggcta cggcccgcgc
     1561 ctcacgcaag agaagctccg ggtcgctgag gcactcgaag cgctgcccga gacagccgaa
     1621 gagctcaagg tggggaccct cagcttctcc gcggtgcggg agctcacgcg cgttgccgtc
     1681 ccggcgaccg agcgcgattg gctccgagca gcgcgcgggc gcacggtgcg cgaggtggaa
     1741 gagctcgtgt ccggccatcg tgccggaagc cgcccgggcg acgtcccgga cgcgagcgcc
     1801 cgccaggtgt cgccggaagc ggtcgaaatg gccgagtgcg atgcgcagca cctcggacat
     1861 ctcgaaacca gcgtcgaagc gggcgcccac gcgggaaccc acgtgggcac aacgaagaaa
     1921 cccgcgcgcg cgacgcaaac catcccgcct gctctccgcc gccaggtgct gcgccgcgac
     1981 ggcggacgtt gccaggtgcc cggctgtcgg cacgcaactt tcgtggacgt ccaccatctc
     2041 cggcctcgct ccgaaggcgg cgcgaacaca atcgagaatc tcgtcaccct ctgcggcgcg
     2101 caccaccgtg caagtcacgc cggaaaactg tcgagcacag ggacaccgtc cgaaggtctc
     2161 cgttttctgc acgcggacgg cactccttac ggacatgcac cctcgcccgc tatcgcggag
     2221 cttcgcacga gggcttatcg cgcgcttact cacctgggct tccgcgagtc ggaggcgaat
     2281 ttggcgctcg ctcgtgctcc tctgactccg aacctcaccc tcgaagacat catccgccaa
     2341 accctgcgcg cgctcgcccg agaccggcac taaaacccta cggctcggcc gcggggtagc
     2401 actacccgtc cggccgcgct ccgtcgcggc tcatctcgtc ggctcactgc gcgctcgttt
     2461 cgcgcgatga tgcgccccgt cgcacccgcg cgaggtcgcc gcgcccccgc gaccgaagcg
     2521 ggcgctaggc gggcgcgcgc gcgcgccgat ggccgagctc gcgggccggg cggcgacgct
     2581 cgtagcgggg gcaactctcg agccgcccga tgctggctcc cttctgaatg ccgctgggac
     2641 tcgctgcctc gtgggaagaa ctcgctccag cacgagcctt cggggtctgg aaggcctctt
     2701 ctcggcagcc gttccgctag ccttggttgc gcttcgcctc ggcggacgcg acgcgctcgg
     2761 cgatgatgct gcggagcgca gcgagatcgt agcgcgccgg acgagtgtcg cctgattgtt
     2821 gcgcgacgct ttcgacgatg cggtcgacga cggtgcgcgg gtgctccggc accttgagcg
     2881 cttcggcgag cttgccgagc gcggcgcgct ccgcgtcgga aacgacgccg tccaggcgcg
     2941 tgatccacac ggcgacgccg tagacgtaca ggcgatcttc cttcgagaga cctttgcgat
     3001 cgatgacgcc gaggtcgacg ggcgctttgg tcgcggcctc gatttcgtta atggcttcga
     3061 gctcgagccc ctcttcgacg gccgcacgca cgatggcgtc ggcctcgtcg gcatcgagct
     3121 gaccgtcagc ccagcccacg gcggcgagcg cgacgtacac gtcgcgtccc aatggcgttt
     3181 tttccgtcat ctccaattgc atacaccaaa ttcagcggtc ccg
//
LOCUS       DATIML010000999         3614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1372533, whole genome shotgun sequence.
ACCESSION   DATIML010000999 DATIML010000000
VERSION     DATIML010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3614
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372533"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VLJ38_17265"
     CDS             complement(<1..376)
                     /locus_tag="VLJ38_17265"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSU41332.1"
                     /translation="MLIVGGGPAGASLAVALGRRGFEVELYEQATFPREKACGEGLLP
                     AGVDVLRSLELADAVGGRPLTGVRYHLTGGSVRSGFGAGERELHGIGQKRLRLDAALW
                     AAAAHSPGVRAAAGTRVDALLHE"
     gene            complement(382..984)
                     /locus_tag="VLJ38_17270"
     CDS             complement(382..984)
                     /locus_tag="VLJ38_17270"
                     /inference="COORDINATES: protein motif:HMM:NF016062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006481 - C-terminal protein methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HSU41333.1"
                     /translation="MLSVLLVGLVGLLAVTRLLELRVSRRHRRALVESGARPIEERGF
                     LVMVFLHVAVLVGAIVEPLVTHRSVPVWLGVTAGAGVVGASLLRVLAIQSLGRHWNVR
                     VIDSTALGVVTSGPYRFVRHPNYAAVFLELLLLPLVQGAWLTAALGSALHVFVLRRRI
                     LLEEAVLLAHPEYRASMGGKPRFLPRLWRPAPALAQTEKS"
     gene            complement(978..2030)
                     /locus_tag="VLJ38_17275"
     CDS             complement(978..2030)
                     /locus_tag="VLJ38_17275"
                     /inference="COORDINATES: protein motif:HMM:NF012421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HSU41334.1"
                     /translation="MAFITHVGTALPRHAIEQGAVASVVAKTLGLDADRTASVQALFE
                     RTRVRGRHSVVPLEHIGAPRSLTEGMALYRRHGLELALAAARSCLEQAALAPGDVDLV
                     ITSSCTGVSLPSLAALLVEPLGLRNDVRRLPLTELGCAGGAGALAQAHAHLRAFPQAR
                     VLVVAVELPSLTFRRDDPSAENIVASALFGDGAAAVLLEASPAAAGIEILATHTGLLP
                     ASLDDMGFDLRDSGFYVVLSKNVPRIIAESTPRVVREFLARHALALEDLAFFVLHPGG
                     RRVLEALESSLALKPGQTAASWDVLSDYGNQSSASVLFVLRETLGRGVPRGYGLLAAF
                     GPGITVELALLQGHPC"
     gene            2516..>3614
                     /locus_tag="VLJ38_17280"
     CDS             2516..>3614
                     /locus_tag="VLJ38_17280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41335.1"
                     /translation="MVLGWASLVAAGLPPPHIDDVWYVDPAISFAQTGRLEAPALARV
                     LAAFGTQRCFLSFPFYPLLLGTWFRILGVSFGSAAAFWIACGAVSSVSLRAILRALGA
                     GAASEIAALVYLPLQVQCYGLRPEQTGYALSLAGAALLMRPTPARRSLGCLLTCGAVF
                     CASNFVAVAPGLALTAVCSERVTPALLRRLALTGAFTAALTLALFTLAIGAHFSEFVR
                     QASAMSRVTFSRSQTLSFVFEQLAGHGFAKLHMGPLYALYFPIFAVAMTPAGRFFPAP
                     ARTFIVGVGLTLVMTIAYRARSFDVMNPLVFASVLLAAPALAIQFGRLPVVAVLGCVG
                     ACSVAGDCVNLLLTPACDKVALARVRRRASEL"
BASE COUNT          565 a         1280 c         1218 g          551 t
ORIGIN      
        1 gttcgtgcag cagcgcgtcg acgcgcgtcc ctgcggccgc gcgcacgccc gggctgtggg
       61 cggcggcggc ccagagcgcg gcgtcgaggc gaaggcgctt ttgaccgatc ccgtgaagtt
      121 cgcgctcgcc cgcgccgaag ccggagcgca ccgagccacc cgtcaggtga tagcgcacac
      181 ccgtgagcgg ccgtccgccg acggcatccg cgagctcgag cgagcgcagc acgtcgacgc
      241 ctgccggcag caaaccttcg ccgcaagcct tctcgcgcgg gaacgtcgcc tgctcgtaga
      301 gctcgacctc gaagccgcga cgtccgagcg cgacggcgag cgacgcgccc gcgggacctc
      361 cgccgacgat gagcacgtcg ctcaagattt ctccgtctgc gcgagcgccg gcgccgggcg
      421 ccagagccgc ggcaagaatc gaggctttcc ccccatgctc gcgcggtact cgggatgcgc
      481 gaggagcacc gcttcttcga gcaggatccg gcgccgcagc acgaagacgt gcaacgccga
      541 accgagcgcc gccgtgagcc acgccccctg aacgagcggg agcagcaaga gctcgaggaa
      601 gacagccgcg tagttcggat gccggacgaa gcggtacggt cccgaggtca cgacaccgag
      661 cgcggtcgag tcgatgaccc ggacgttcca gtgccggccg aggctctgaa tggccagaac
      721 gcgcagcaag ctcgcgccga cgacacccgc gcccgcggtc acgccgagcc agaccggaac
      781 cgagcggtgc gtgacgagcg gttccacgat cgcccccacg agcacagcga cgtgcaagaa
      841 aaccatcacc aaaaatcccc gctcctcgat cggccgcgcg ccgctctcga cgagtgcccg
      901 gcgatgacgg cgcgagacgc gaagctcgag tagtcgggtc accgcgagta gcccaacgag
      961 ccccacgagc agcacgctca acacgggtgc ccctgcagca gcgcaagctc cacggtgatg
     1021 ccgggcccga acgccgcgag cagtccgtac ccccgaggca caccgcgtcc gagcgtttca
     1081 cgcagcacga acagcacgga cgcgctcgac tggttgccgt agtccgagag cacgtcccag
     1141 gacgcggcgg tctgcccggg cttgagcgcg agcgaagact cgagcgcttc gagcacgcga
     1201 cgaccgcccg gatgcaacac gaagaacgcg agatcctcca gcgcaagcgc gtgccgcgcg
     1261 aggaactctc ggactacacg cggggtcgac tcggcgatga tgcgcggcac gttcttggac
     1321 aggaccacgt agaaccccga atccctgaga tcgaagccca tatcgtcgag cgaagcgggc
     1381 agcagccccg tgtgcgtcgc gaggatctcg atgccggccg ccgcggggct agcctcgagt
     1441 agcaccgcgg cggcgccgtc gccgaacagc gcgctggcga cgatgttctc cgcggacgga
     1501 tcgtcgcgac gaaacgtgag gctcgggagc tccacggcga ccaccaacac gcgagcctgc
     1561 gggaacgctc gcaaatgagc gtgcgcctga gcgagcgcgc cagccccgcc ggcacaaccg
     1621 agctccgtca gcggcaagcg ccgcacgtcg ttgcgcagcc cgagcggctc cacgagcagc
     1681 gccgcgagcg acggcagcga aacgcccgtg cacgacgaag taatgacgag atcgacgtcc
     1741 ccgggcgcca gggcggcttg ttcgaggcag ctccgcgccg cagccagcgc gagctcgaga
     1801 ccgtgacggc gataaagtgc catgccctcg gtcagcgagc gcggcgcgcc gatgtgttcg
     1861 agcggcacga cgctgtgccg gcctcggacc cgcgtgcgct cgaacaacgc ttgaaccgac
     1921 gcggtgcggt ccgcgtcgag gccgagtgtc tttgcgacca cgctcgcgac ggcaccctgc
     1981 tcgatcgcgt gtcgcgggag tgccgtaccg acgtgagtga tgaacgccat gcgcctcgac
     2041 ttggtgatgg ccccaaggca gaagccgtgc cgagcggcgc tcgaccccta aagccgcacg
     2101 tcagccctaa ggctcggcag gcgcggccaa tcgacacagc gggacgggcg tgtcctgtgc
     2161 cgccctggcc tttgcatgct cgcgaagtcg ggaacgcgga acggtcccga acccaggagc
     2221 cacgtgcgcg ccgcagccac ctcggtgaag acggagacga gcgggatcca catcgttgcg
     2281 cgcgcgactt cgaacattca atcgcgcgtt cagatcggga ctcccgcgct cgcgcacgcc
     2341 cagcctcgaa tgcgcgtgcg cgcctgtgca actgagtcac tgggccccgg ctggtgagga
     2401 ttccgaggag tgcttctggg tggcaatttc ttccgacgct catatatggc cttattcaaa
     2461 tagcagttct cgtctcgctc ggttcgcgcg gcagcacgcg ctcgcctgcg cgctcgtggt
     2521 cctcgggtgg gcttcgctcg tcgcggcggg tctacctccg ccccacatcg acgatgtctg
     2581 gtacgtcgat ccggccatca gcttcgcgca aaccgggcga ctcgaggcgc cggcgctcgc
     2641 aagggtgctc gccgctttcg gaacgcagcg ttgttttctg tcgtttccgt tctaccccct
     2701 gttgctgggg acctggtttc gtatcctcgg tgtgagcttc ggcagcgcgg ccgcattttg
     2761 gatcgcgtgc ggggccgtga gctcggtgtc cttgcgcgcg atcctgcgcg cgctcggtgc
     2821 gggcgccgcc tcggaaatcg cagcgctcgt ctacctgccg ctgcaggtgc agtgctacgg
     2881 cttgcggccg gaacagaccg gctacgcgct ttcgctggcc ggggcggcgt tactcatgcg
     2941 gccgacccct gcgcgcaggt cgctcgggtg tctgctcacc tgcggcgccg tcttctgcgc
     3001 ttcgaacttc gtcgccgtgg cgccggggct tgccctgacg gcggtgtgct ccgagcgcgt
     3061 gactccggcg ctcctgcgac ggctcgcact caccggcgcg ttcacggccg cgctcacgct
     3121 cgcgctgttt acgctcgcga tcggtgccca tttttccgag ttcgtgcggc aggcaagcgc
     3181 gatgtcacgt gtcacgttct cgcgcagtca gacgctctcg ttcgtcttcg agcagctggc
     3241 gggccacggt ttcgcgaagc tgcacatggg accgctctac gcgctgtact ttccaatctt
     3301 tgccgtggcg atgacgccgg cgggtcgctt cttcccggca cccgcgcgca ccttcatcgt
     3361 cggggtcggc ctcacgctcg tcatgacgat tgcgtaccgc gcgcgctcgt tcgacgtcat
     3421 gaacccgttg gtcttcgcga gcgtcctgct cgccgccccg gcgctggcga tccaattcgg
     3481 gcgcttgccg gtcgtcgccg tgctcggctg tgtcggcgcg tgcagcgtcg ccggcgactg
     3541 cgtgaacctg ctattgacgc cggcgtgcga caaagtcgcg cttgcccggg tgcgtcggcg
     3601 cgcgagcgag ctct
//
LOCUS       DATIML010001000         4448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1660339, whole genome shotgun sequence.
ACCESSION   DATIML010001000 DATIML010000000
VERSION     DATIML010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4448
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660339"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..617
                     /locus_tag="VLJ38_17285"
     CDS             <1..617
                     /locus_tag="VLJ38_17285"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF039343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /protein_id="HSU41336.1"
                     /translation="DRVMATPHMRVGMFDNDRPALVAAYERMTASLHGTHDLPEVGLG
                     CEHYFDDIVYQRLRAGEGLPYPGERAVLLEFYGVDFPPVVVERLFDLRRGRLLPVIAH
                     PERYRYLWGKPEALERLVDAGIAALLDTAALVGKYGREPQRAAEMLLDRGLYHAACSD
                     AHRAADVADVARGMDRIVDLFGEEELDFLFREGPRTILEGKLPE"
     gene            614..1717
                     /locus_tag="VLJ38_17290"
     CDS             614..1717
                     /locus_tag="VLJ38_17290"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSU41337.1"
                     /translation="MSSNDAPARPPRNRIWHKLLLSLVPAAALVWLMQSGSLPIVPRR
                     EELGRVASWTVPAYVGVWSISYFFRLIRWWFLLAAVEVLPLWTVVRAGAVGLFAIALL
                     PFRMGEVVRPLLIRRPPRLTFWAASGTVGAERVLDALSVSVLLLVGLRFAKPLDKLPD
                     HIGTLPIHVAIVPGLALTCALVFASGCVVMGVFYFWRDFARRLTERVVGLVSLPLARW
                     LAAKIEQMAQGLGFLARPRQAVPFMLLTLAYWGLNAVGFWLLAVGCGIDIGFFGATAT
                     MGVVALGIIVPATPGFFGAFQLAIYAGLAMYLPPDAVTDAGSVYAFLGYVLPIGLTMF
                     VGVLGVLAKPRALLALTGEPEQLAPSASENLAR"
     gene            1743..2186
                     /locus_tag="VLJ38_17295"
     CDS             1743..2186
                     /locus_tag="VLJ38_17295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41338.1"
                     /translation="MTRPDRALIVAALALALVLSAGGVGARVEADSEYTKAQTYSGAL
                     RYLRVDLGFEVVEKDSDAAYLVFRYEPPGQQKNESLGTVEIVDSGEHVRVFVRIPRMP
                     EYHERVLRDGLLRKLKDEYGPPLPRKPEPPPKAPGDAGPGDAGTD"
     gene            2264..3742
                     /locus_tag="VLJ38_17300"
     CDS             2264..3742
                     /locus_tag="VLJ38_17300"
                     /inference="COORDINATES: protein motif:HMM:NF012449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSU41339.1"
                     /translation="MTRTSDPKELGAAVSDLVKEALAQEITLAPELDCVLPEHLAPAR
                     NLLHYLALRQHDLRDLQNALSSLGLSSLGRSERCVLATLEAVRRALACLAGTPGEATP
                     SRAPTTFENADRLLDERTRALLGPALPGRSSRIMLTLPHDADASAIEALLAEGADAVR
                     INCAKGSADDWGRMIERVRAGAERRGRECRVLCDLAGPNPRTRDIYGKSRDHVGRVSA
                     GERLWIAAGDKGEPEAPPGVVSVGCTLPTILADLAPGERVYYDDGKLSGVVKQASPDG
                     ALVEITFARKESVKVRADKGLNFPDSRLSLPSLTPKDIGDLDFIARHADIVGLSFVRE
                     PADVQALERELLRLHAEKLGVILKIETRGAFQALPRLLLTAMRHERVGIMVARGDMAL
                     EMGFERLAEAQEEILWLSEAAFMPVVWATQVLDVLNQTGVPSRAEVTDAAMGGRAECV
                     MLNQGKHQLEALRFLRDVLERMEQHQKKKRSMLRKLRISSLS"
     gene            3847..>4448
                     /locus_tag="VLJ38_17305"
     CDS             3847..>4448
                     /locus_tag="VLJ38_17305"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41340.1"
                     /translation="MDARELPLPSRIGRYRIERLLGRGAMGRVLLARDAVLDRDVAVK
                     LLRDDLAVDPDQHRALVDRMRHEAKACARVSHPNIVTLFDMGEDTALGLYLVFEYAEG
                     TTLKERIARGPLPPALAGRIAREIGGALSTAHTSGVLHRDVKPENIILTEHGSKVADF
                     GIARVPNSTLTRDGGLLGTPAYSAPESIAHGEFSPQSDQFS"
BASE COUNT          671 a         1511 c         1515 g          751 t
ORIGIN      
        1 tcgatcgggt catggcgacg ccgcacatgc gtgtgggcat gttcgacaac gatcgcccgg
       61 cgctcgtcgc cgcttacgag cgcatgaccg cgagcctgca cggcacgcac gacttgcccg
      121 aggtggggct cggctgtgaa cactacttcg acgatatcgt gtaccagcgc ctgcgcgcgg
      181 gcgaaggctt gccgtacccg ggcgaacgcg ccgtgctgct cgagttttat ggggtcgatt
      241 ttccgccggt cgtggtcgag cggctgttcg atctgcgccg cggccggctc ctgcccgtga
      301 tcgcccatcc cgagcgctat cgttacctct ggggtaagcc ggaagcgctc gagcgcttgg
      361 tcgatgcagg catcgccgcg ctgctcgata cggcggcgct cgtcggtaag tacggccgcg
      421 agccacagcg cgccgcggag atgttgctcg accgcggact ctaccacgca gcgtgcagcg
      481 acgcgcatcg cgccgccgac gtggcggacg tcgcgcgcgg catggatcgc atcgtcgatc
      541 tgttcggcga ggaggagctc gacttcctct ttcgcgaggg gccccgcacg atcctcgagg
      601 ggaagctgcc ggaatgagct cgaacgacgc gccggcgcgc ccgccgcgca acaggatctg
      661 gcacaagctc ttgctgtcgt tggtaccggc tgcggccctc gtctggctca tgcagagcgg
      721 ctcgctgccg atcgtgccgc gccgcgagga gctcggccgc gtcgcgtcct ggacggtgcc
      781 cgcgtacgtc ggcgtgtgga gcatctccta cttctttcgt ctcatccgct ggtggttctt
      841 gctggcggcc gtggaggtcc tgccgctctg gacggtcgtg cgcgcgggcg ccgtcggcct
      901 gttcgcgatc gcgctcttgc ccttccgcat gggcgaggtc gtgcgtccct tgctgattcg
      961 acgtccgccg cggctcacgt tttgggcggc gagcgggacc gtcggcgcag agcgtgtcct
     1021 cgacgcgctc tcggtcagtg tgctcttgct cgtcggtctt cgcttcgcga aacccctcga
     1081 taagttgccg gaccacatcg gcacgctgcc gatccacgtg gcgatcgtgc cgggcctggc
     1141 gctcacgtgt gcgctcgttt tcgcgagcgg ctgcgtcgtc atgggcgtgt tctatttttg
     1201 gagagatttt gcgcggcgcc tcaccgagcg cgtcgtaggt ctcgtctcct tgccgctcgc
     1261 gcgttggctg gcggccaaaa tcgagcaaat ggcgcaaggg ctcggctttc tggcgcgtcc
     1321 ccgtcaggca gtgccgttca tgctgctcac gctcgcgtat tgggggctca acgccgtcgg
     1381 cttctggctg ctggcggttg ggtgcggcat cgacatcggg ttcttcggtg cgacggcgac
     1441 gatgggcgtc gtcgccctcg gcatcatcgt gcccgcgaca cccggctttt tcggggcgtt
     1501 ccagctggcg atctacgcgg gcctcgccat gtacctgccg ccggatgccg tcacggacgc
     1561 ggggtcggtc tacgcgttcc tcgggtacgt gttgccgatc ggcctgacca tgttcgtcgg
     1621 cgtgctcggc gtgctcgcca agcctcgtgc cctgcttgcg ctcacgggcg agccggagca
     1681 actcgcgccg agcgcctccg aaaacttggc ccgctgacag ccggcacgtt acgggcggag
     1741 cgatgactcg acccgatcgc gcgctcatcg tggcggcgct cgcgctggcg ctggtcttgt
     1801 cggccggcgg cgtcggggcg cgcgtcgaag cggactccga gtacacgaaa gctcagacgt
     1861 acagcggcgc actccgctac ttgcgcgtcg acctcgggtt cgaggtcgtg gagaaggatt
     1921 ccgacgcggc gtacctcgtc ttccgctacg agcccccagg gcaacagaag aacgaatcgc
     1981 tcggcacggt cgagatcgtc gactcgggcg aacacgtgcg ggtgttcgtc agaattcccc
     2041 gcatgcccga gtatcacgag cgagtcctcc gcgacgggct cctgcgcaag ctcaaggacg
     2101 aatacgggcc gccgctcccg cgcaaacccg agccgccgcc gaaagcgccc ggtgacgcgg
     2161 ggcccggcga cgccggcacg gactgagcag ccgtcaccgt aaagtcacgc tcgcgccgga
     2221 cacagcgtgt cgaacgggcg tagttcctgc ttgtcgcgtg gacatgactc gcacctcgga
     2281 tccgaaggag ctcggcgccg ccgtgtccga tctcgtgaag gaagcgctgg cgcaggaaat
     2341 cacgctcgcg cccgagctcg actgcgttct cccggagcac cttgccccgg cgcgcaatct
     2401 tctccattac ctggcgctca ggcagcatga tttgcgcgac ctccaaaatg cgctgagctc
     2461 gctcgggctg agctcgctcg ggcgctccga acgctgtgtg ctcgccacgc tcgaagccgt
     2521 gcgccgcgcg ctcgcgtgtc tcgccgggac tcccggcgaa gccacgccgt cacgtgctcc
     2581 gacgacgttc gaaaatgccg accgcttgct cgatgagcgc acccgagcgt tgctcgggcc
     2641 ggcgctgccg gggcgctcgt cgcgcatcat gctgacactg ccgcacgacg ccgacgcgag
     2701 cgcgatcgaa gcgctccttg ccgagggcgc cgatgcggtg cgcatcaact gcgccaaagg
     2761 gagcgccgac gattgggggc gcatgatcga gcgggtccgc gcaggagcag agcggcgcgg
     2821 acgcgaatgc cgcgtgcttt gcgatctggc tgggccaaat ccacgcacgc gcgacatcta
     2881 cggcaagagc cgcgatcacg tcggccgggt gagcgccgga gagcggctct ggatcgctgc
     2941 gggcgacaag ggtgagccgg aagccccgcc tggcgtcgtc agcgtggggt gcacgctgcc
     3001 gacgattctc gccgacctcg cacctggcga acgcgtctac tacgacgacg gcaaactctc
     3061 gggggtcgtg aagcaggcgt cgccggacgg cgccctcgtc gagatcacgt tcgcgcgcaa
     3121 agagagcgtc aaagtgcgag ccgacaaggg tctgaacttt ccggactcgc gactctcgct
     3181 gccgtcgctc acgcccaaag acatcggcga tctcgacttc atcgcccgcc atgccgacat
     3241 cgtcgggctt tcgttcgtgc gtgagccggc ggacgttcaa gccctggaac gcgagctctt
     3301 gcggcttcac gccgagaagc tcggcgtgat cttgaaaatc gagacacgcg gcgcgttcca
     3361 agcgctccca cgactcttgc tgacggccat gcggcacgag cgcgtcggca tcatggtagc
     3421 gcgcggcgac atggcgctcg aaatgggctt cgaacggctc gccgaggcgc aggaagagat
     3481 cctctggctc agcgaggccg ccttcatgcc cgtggtgtgg gcgacgcaag tgctcgacgt
     3541 gctgaaccag accggcgtgc cctcgcgcgc cgaagtcacg gacgccgcca tgggcggccg
     3601 agccgagtgc gtcatgctga accagggcaa acaccagctg gaagccctgc gctttctgcg
     3661 cgacgtgctc gagcggatgg agcagcacca gaagaaaaag cgatccatgc tgcgaaagct
     3721 ccgcatctcg agcctttcct agcccacccc acgagccgcg gggagccggc aggcccgggc
     3781 gcgcgccgcc acggacagcg aggagattgg cgaaatcggg cgccgagcga tagaggagac
     3841 tgtcggatgg acgctcgcga gctcccgctg ccctcacgca tcggccggta ccggatcgag
     3901 cggctgctcg gccgaggcgc catgggccgc gtactgctcg cccgcgacgc ggtgctcgac
     3961 cgggacgtgg ccgtgaagct cttgcgcgac gacctcgccg tggatcccga tcaacaccga
     4021 gcgctcgtcg atcgcatgcg gcacgaggcg aaggcgtgtg cgcgcgtgtc gcacccgaac
     4081 atcgtgacgt tgttcgacat gggggaagac accgcgctcg gactctatct cgtgttcgaa
     4141 tacgccgagg gcacgacgct caaggagcgg attgcccgcg gccccctgcc tccggcgctc
     4201 gcggggcgta tcgcgcgcga gatcggcggc gcgctcagca ccgctcatac gagcggcgtg
     4261 ctgcaccgcg acgtgaaacc ggagaacatc attctcacgg agcacggcag caaggtcgcg
     4321 gatttcggca ttgcgcgcgt gccgaactcg accctgacgc gcgacggcgg gctgctcggc
     4381 acacccgcgt acagcgcgcc cgaatcgatc gcccacggcg agttctcgcc ccaaagcgat
     4441 cagttttc
//
LOCUS       DATIML010001001         3975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3963218, whole genome shotgun sequence.
ACCESSION   DATIML010001001 DATIML010000000
VERSION     DATIML010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3975
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3963218"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..1053
                     /locus_tag="VLJ38_17310"
     CDS             106..1053
                     /locus_tag="VLJ38_17310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41341.1"
                     /translation="MRTRAAALATEELVEAVAASELVRSRSAVAAVVAGFFAAAGAHP
                     GVLLGPVTLLVVGVGSGGRVFDGRVRQPGLGARRPRGFVEEAVPVAAKVAISTSVPAM
                     TVALAYDRRATLTAVARAGARAALGAGAAERARLLERVAEVGPAALSDSSFVRPMLHL
                     ASPSEGGLLTPADFTAAADLVLDARERTTATGLVFEPPWADVKPEPMGGKGGRHGICA
                     VDAEGVYAALAYECLEDGLEIEALGLVAPLVAVPVRRGTPRVAPGTRLPASAPLAILC
                     DEAGAPFEVTATLQAAPRAKKAHLSVARGEGRWVVATRR"
     gene            complement(1076..2224)
                     /locus_tag="VLJ38_17315"
     CDS             complement(1076..2224)
                     /locus_tag="VLJ38_17315"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSU41342.1"
                     /translation="MKPLRRVLFLNTMGVLGGQEVVLLDIVRGLDPARYQAVVASLFH
                     GDLTETLRAEGRTAYVLPSHRLRRPLQVVRTLTALASLLRREHIDILHVNGDSLLFYG
                     GLAAFPQRVPCVWHVHEPVATRGSAWVRFFYETQRLMHPAWTVSNTEAVRQSYLAAYP
                     RLGPCTAIMPSVDVASFGPDADGERARRRFELPPTAPILLVIGRLQRSKGQRQAVEAL
                     AACAGVAEPPHLVLCGGPPYGIDEDFPAELRDLARALGLEQRVHFVGAVTEGEKRDLL
                     AACTAFVHPALREAFGIVVIEGMAAGKPVIVTDAAGPKSIVQGTGAGELVPAGNVAAL
                     AEAITRVLRDPERATRMGELGRALAAERYDTRAMVRRVEAVYDAVLGE"
     gene            complement(2234..>3975)
                     /locus_tag="VLJ38_17320"
     CDS             complement(2234..>3975)
                     /locus_tag="VLJ38_17320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41343.1"
                     /translation="YMWSPSPLFKSPVRDAPKVGLYIDGAAGTVMPHYDGTKASIEYL
                     RSDMVNLAYNLPGLRKSAVIGVGGGRDILSAHLFGVPEIVGVELNPIFVKLHTEHPFF
                     KAFSGLTTLPNLRLYVDDARSWFASSSERFDLIQMSMIDTWAATGAGAFSLSENGLYT
                     LEAWRTFLGRLSDGGVFTVSRWYSPSDLNETGRLIALATAATLDAGQDDARPNMLVAR
                     SSHVATLVLSKRPFTPEQLKVLEDEVARLRFDILLAPNVEPESKLLASIVHSRSIADI
                     NRVAASAYLDMSVPTDNRPFFFNQLRFSQIPSAARRTLTSQDGGVVSGNLFASIVLGL
                     ILLISMLAVAMTIVLPLRGAVRDAEPRLVALGTLYFSLIGLGFMFSEISLLQYFSVYL
                     GHPVYSLGVCLFSLILASGIGSLASGRLSLATPRALVVWGLLVGGYLVVAPHVLTRLF
                     LATTALQLPARIGVALAVVMPLGFLLGFAFPTGMRLIEAVDRKPTPWFWGINGATGVL
                     ASVLAVVLGIAFGINVTMTLAGVCYWGLIPAALGLLRISRGNLQHLAASAAATEHGPA
                     SAGDSGAQVATPQ"
BASE COUNT          695 a         1301 c         1414 g          565 t
ORIGIN      
        1 ggagtccgag gaagacgacg acggcatcga ggacgatctc gacgacgatc tcgaagctga
       61 cgacgaatcc gaggacgagt agcgtatgcc gctcggagca acggcgtgag gacccgcgcg
      121 gccgcgctcg cgaccgaaga gctcgtcgaa gcggtggccg cgagcgagct cgtgcgctcg
      181 cggagcgccg tggcagccgt ggtcgccggc tttttcgccg cggcgggggc gcatccgggc
      241 gtcttgctcg gcccggtgac gttgctcgtg gtgggcgtcg gcagcggtgg ccgtgtgttc
      301 gacggccgcg tgcggcaacc gggactcggt gcgcggcggc cgcgcgggtt cgtcgaggaa
      361 gccgtgcccg ttgcggccaa ggtcgcgatc tcgacgagcg tgccggcgat gaccgtcgcg
      421 ctcgcgtacg accggcgcgc gacgctcact gcggtcgcgc gtgccggggc gcgagcggcg
      481 ctcggcgccg gggcggccga gcgcgcgcgc ctgctcgagc gtgtggccga agtcgggcca
      541 gcggcgctct ccgattcgag cttcgtgcgg cccatgctgc accttgcgag tccgagtgaa
      601 ggaggcttgc tcacgccggc cgacttcact gccgcggcgg atctcgtgct cgatgcgcgc
      661 gagcggacga cggcgacggg cctggtgttc gagccgccct gggccgacgt gaagccggag
      721 ccgatgggcg gcaagggcgg tcgccacggg atttgcgccg tcgatgccga aggcgtgtac
      781 gccgcgctcg cgtacgaatg cctcgaagac ggcctcgaga tagaggcgct cggtttggtc
      841 gctccgctcg tcgccgtgcc cgtgcggcgc gggacgccgc gcgtcgcgcc cggcacgcgc
      901 ttacctgcat cggcgccgct cgcgatcctg tgcgacgaag cgggcgcgcc gttcgaggtg
      961 acggcgacgt tgcaagccgc gccgcgcgcg aagaaagcgc acttatcggt cgcgcgcggc
     1021 gaggggcgct gggtcgtcgc gacgcgacgc tagccggtgc cgcgcaaatg gggcgtcact
     1081 cgccgagtac ggcgtcgtac acggcctcga cgcgccggac cattgcccgc gtgtcgtagc
     1141 gttcggcggc gagcgctcga ccgagctcgc ccatgcgggt ggcgcgttca gggtcgcgga
     1201 gcacgcgcgt gatcgcctcg gccagggcgg cgacgtttcc ggccggcacg agctcgccgg
     1261 cacccgtgcc ctgcacgatg ctcttcggtc ctgcagcgtc cgtcacgatc accggcttgc
     1321 cagcagccat gccctcgatg acgacgatgc cgaacgcctc gcgcagcgcg gggtgcacga
     1381 acgccgtgca agcagccaaa aggtcgcgct tctcgccttc ggtcacggca ccgacgaaat
     1441 gaacgcgctg ctcgagcccg agggcgcgcg cgaggtctct gagctctgcc gggaagtcct
     1501 cgtcgattcc gtacggtggg ccgccgcaca gaacgagatg cggcggctcg gccactcccg
     1561 cgcacgcagc cagggcctcg accgcttggc gctggccttt cgaacgctgt agccggccga
     1621 tgacgagcaa gatcggcgcc gtgggcggca gctcgaagcg gcgtcgagct cgctcgccgt
     1681 cggcgtccgg cccgaagctc gcaacatcga cgctcggcat gatcgccgtg caggggccga
     1741 gcctcggata cgccgccaag tagctttgcc gcacggcttc ggtgttggac acggtccagg
     1801 cggggtgcat caagcgttgc gtctcgtaaa agaagcgcac ccaagcgctg ccgcgcgtcg
     1861 cgacgggttc gtgcacgtgc cacacgcacg ggacgcgctg cgggaaagcg gcgaggcccc
     1921 cgtagaacaa gagcgagtct ccgttgacgt ggagaatgtc gatgtgctcg cggcggagca
     1981 gcgaggcaag cgcggtgagc gtccggacga cttggagcgg ccgtcgcaga cgatgcgatg
     2041 gcagcacgta cgccgtgcgc ccctccgcgc gcaaggtctc cgtgagatcg ccgtggaaca
     2101 gcgaggcgac gaccgcttgg taacgggccg gatcgagtcc gcgcacgatg tcgagcagca
     2161 ccacctcctg gccgccgagc acacccatcg tgttgagaaa gaggacgcgt cgcaacggct
     2221 tcaccgggcc gacttactgc ggtgtcgcga cctgagcgcc ggagtccccg gccgacgccg
     2281 gcccgtgttc cgtcgctgct gcggaagccg cgagatgctg caggttgccg cggctgattc
     2341 taagcaggcc gagcgccgcc gggatcaacc cccagtagca gacccctgcc agcgtcatcg
     2401 tgacgttgat cccgaacgca ataccaagca cgacggcgag cacggaggcg agcacgcccg
     2461 tcgcaccgtt gatcccccag aaccaaggcg taggcttccg gtccaccgcc tcgatcagtc
     2521 gcattcctgt tggaaacgca aagcccaaca gaaaacccaa cggcatcacg accgccaagg
     2581 cgacgccaat gcgtgccggg agctgcaacg cggtggtcgc aaggaacagt cgggtcagca
     2641 cgtgcggcgc aacgaccaag taaccaccca ccaacaagcc ccacacgacg agcgcacgcg
     2701 gcgtcgcgag cgagaggcgg ccggaggcca aggagccaat accgctcgcg aggatcaggc
     2761 taaacaggca aacgccgagc gagtagaccg gatgcccgag gtacacgctg aagtactgca
     2821 agagcgagat ctcactgaac atgaagccga gaccgatcag cgagaaatag agtgtaccga
     2881 gcgccacgag cctcggttcc gcatcacgca cggcgccgcg cagcggtaga acgatggtca
     2941 tcgccaccgc gagcatcgag atcagcaaga tcagcccgag cacgatggag gcgaacaggt
     3001 taccgctcac gaccccgccg tcctgacttg tgagcgtgcg acgcgccgcg ctcggaattt
     3061 gcgagaagcg cagctggttg aagaagaacg gccggttgtc ggtcggcacc gacatgtcga
     3121 ggtaggcgga cgccgcgacg cggttgatgt cggcgatgga tcgcgagtgg acgatgctgg
     3181 cgagcagctt ggattcaggc tccacgttcg gggcgagcag gatgtcgaag cggaggcgcg
     3241 cgacttcgtc ctcgagtact ttgagctgtt cgggcgtgaa cgggcgcttc gagagcacca
     3301 gcgtcgcaac gtgcgacgaa cgcgcgacga gcatgttggg gcgggcgtcg tcctggccgg
     3361 cgtcgagcgt ggcggccgtc gcgagcgcaa tcaggcggcc cgtttcattg agatccgagg
     3421 ggctatacca gcggctcacc gtgaaaacgc cgccgtcgct gagccggccc aaaaaggttc
     3481 gccaagcctc cagcgtgtag aggccgttct cgctgaggct gaacgcgccg gcgccggtcg
     3541 cggcccaggt gtcgatcatg ctcatctgaa tcaaatcgaa gcgctccgag gagcttgcga
     3601 accagctccg ggcatcgtcg acgtaaagcc gcagattcgg cagcgtcgtg aggccggaga
     3661 acgccttgaa gaacgggtgc tcggtgtgca gcttgacgaa aatggggttg agctcgaccc
     3721 ccacgatctc gggcacgccg aagaggtgag ccgaaagaat atcgcgcccg ccaccgacgc
     3781 cgatcaccgc cgacttgcgc aaccccggca ggttgtaggc gagattcacc atgtcggacc
     3841 ggaggtactc gatggacgcc ttcgtgccgt cgtagtgcgg catcacggta ccggcggcgc
     3901 cgtcgatgta caaacccacc ttcggcgcgt cgcgcacggg tgatttgaac agcggagagg
     3961 gactccacat gtact
//
LOCUS       DATIML010001002         1909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3964394, whole genome shotgun sequence.
ACCESSION   DATIML010001002 DATIML010000000
VERSION     DATIML010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3964394"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..>1909
                     /locus_tag="VLJ38_17325"
     CDS             160..>1909
                     /locus_tag="VLJ38_17325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41344.1"
                     /translation="MAREVRAEPASTETLTIEADHFVFALPVEVMAEVLEKQPELLAA
                     EPKLAGVLELGRHQVEWMNGIQFYLTEDVPIARGHVNHVDSAWALTSISQSQFWPDFP
                     NAHYADGRVRTILSVDISAWEIPSPSGKAARDCDYREVAEETWRQLKQSLNRERTVLS
                     DDMLHPTTPWHIDDDIVERLRKERRLPRRERVRRAEQKQAQGRTDEPDLLTNAEPLLV
                     NLVDSWDLRPEARTAVANLYLASDYLKTNTNLATMEAANEAARAATNAILEATKVPEP
                     PCRIQPLSEPFAGLRARDAERFRRGDSQQNPFYLDLLAFVVLVVGATGLKLLGWLNAV
                     PRRLWLLGAGIAGLLALFGTVWNQAWSLAFTSACHVAARLDALGPAACLSTLPPVPTP
                     AGRAEFWYAAYMVIFGLSLFTLPKKTLAALGFPDEYGPWIPLLGVAPLIIATFYATAA
                     LFDVELFFWFSVAGRVIVFLSVLYLTEGRHRASPLLLMVAAPDAASAIWSGMLLAPNV
                     AAGRLFCLGVMNVIAAFSFQFFPAGTLRALGFPAKSSAWIPMTAILLWFWGVYAALAV
                     AFHFGALLVAGLVCQAI"
BASE COUNT          277 a          648 c          627 g          357 t
ORIGIN      
        1 gacgtttccg ccggcccgcg cgacgtcgcc gcgacgcgag ccgcacccga cgcacgctcc
       61 gcgccggccg cgccttcccc gcgcgaggca cgcgcccgcg aggaacgtcg cgcgcgctgg
      121 cgggaacggg ccgccgcgcg acgactcgcg ggggccgccg tggcgcgcga agtgcgcgcc
      181 gaacccgcga gcacggagac gctgaccatc gaagccgacc acttcgtctt tgccctgccc
      241 gtcgaggtga tggccgaggt gctcgaaaag caaccggagc tactcgccgc cgagcccaag
      301 ctcgcgggcg tgctcgagct cggccgtcat caggtcgagt ggatgaacgg cattcaattc
      361 tacctcacgg aggacgtgcc catcgcgcgt ggtcacgtca atcacgtcga ttcggcctgg
      421 gcgctcacga gcatctccca gtcacagttt tggccggatt tcccgaatgc ccactacgcc
      481 gacggtcgcg tgcgcacgat cctgtccgtg gacatttcgg cctgggagat accgagtccg
      541 agcgggaaag ccgcgcgcga ttgcgactac cgtgaggtcg cagaagaaac ctggcgccag
      601 ctcaagcaat cgctcaatcg cgagcgcacg gtgctgtcgg acgacatgct gcacccgacc
      661 acgccctggc acatcgacga cgacatcgtg gagcgcttgc gcaaggagcg ccgtctgccg
      721 cgacgggagc gcgtgcgtcg cgcggagcaa aagcaggccc aaggccggac cgacgaaccg
      781 gacctcttga ccaacgccga gccgctcctc gtcaatctcg tcgatagttg ggatctgagg
      841 ccggaagcac gaactgctgt cgccaatctc tatctcgcgt ccgattacct caagacgaac
      901 acgaacctcg cgacgatgga ggcggcgaac gaggcggcgc gagccgcgac gaacgcgatc
      961 ctcgaggcca cgaaagtgcc ggagccgccg tgccggatcc agccgctcag tgagcccttc
     1021 gcgggtctgc gcgcgcgcga cgccgagcgc tttcggcgcg gtgactcgca gcagaacccg
     1081 ttttacttgg acctgctcgc cttcgtcgtg ctcgtggtcg gtgcgaccgg actcaaactg
     1141 ctcggttggc tcaacgcggt tccgcgcagg ctttggctac tgggcgcggg catcgctggg
     1201 ctgctcgctc tcttcggcac ggtctggaat caggcctggt cgctcgcgtt cacgtcggct
     1261 tgtcacgtcg ccgcgcggct cgatgcactc ggtccggcgg cgtgtctgag cacgctgccg
     1321 ccggtgccga caccagccgg gcgcgccgag ttttggtacg ccgcctacat ggtgattttc
     1381 ggtttgtcgc tcttcacgtt gccgaaaaag acgctcgctg cgctcgggtt tccggacgag
     1441 tacgggcctt ggatccccct gctcggcgtc gcgccgctca tcatcgcgac cttttacgcg
     1501 acggcggcgc tcttcgacgt agagctcttc ttttggtttt cggtggcggg ccgcgtcatc
     1561 gtctttcttt cggtgctcta cctcacggag ggacgtcacc gtgcgtcgcc gttgctcttg
     1621 atggtcgcgg cacccgacgc ggcgagcgcg atctggagcg gtatgctgct cgcgccgaac
     1681 gtcgccgcgg ggcgtctctt ttgcttgggt gtcatgaacg tcatcgctgc gttctcgttc
     1741 cagttctttc cggcaggcac gctgcgcgcg ctcggcttcc cggccaagtc ttcggcctgg
     1801 ataccgatga cggcgatttt attgtggttt tggggcgtgt atgcggcgct cgccgtcgcg
     1861 ttccatttcg gcgcgctgct cgtcgccggg ctcgtgtgcc aggcgattt
//
LOCUS       DATIML010001003         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4545596, whole genome shotgun sequence.
ACCESSION   DATIML010001003 DATIML010000000
VERSION     DATIML010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4545596"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..1176
                     /locus_tag="VLJ38_17330"
     CDS             85..1176
                     /locus_tag="VLJ38_17330"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HSU41345.1"
                     /translation="MTKNLPAQLTRDQSDVELERRFRAMADHAPVLLWMAGTDGLCNF
                     FNQRWLEFTGKPVEQELGSGWAAGVHPEDFQHCMTLYLESFVARVAFSMEYRLLRADG
                     QYRWVYDQGAPRFEPDGTFAGFIGSCTDITEQRLARDALGKMNLELEDRVRERTAIAH
                     EREVLLREVHHRVKNDLQLISSVLSMQARRLVDAASAEALAECQSRVQTIALIHEYMY
                     QSENLARLPLSRNVRGLAANLVRAGGAPGSSIGLELDVEEDITLPVDRAIPCGLILNE
                     LLTNALKHAFPAGRRGKMRVTLRREGPEMLLLGVADDGVGLAEDHEDNANGSLGFRLV
                     RAFAEQLGATVRVSRDVGTSVEVLFRPEG"
     gene            1212..>2054
                     /locus_tag="VLJ38_17335"
     CDS             1212..>2054
                     /locus_tag="VLJ38_17335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41346.1"
                     /translation="MAAILVVEDERVVARDIEESLMRMGYDVVGLAASSTECLAHAEE
                     RRPDLVLMDIRIEGALDGIETARLLRSRFDVPVIFLTAYADDQTVARAKETEALGYIL
                     KPFRAGELKSAVEIALFKHEMEMRLKLRERWFATTLRAIGDAVVAVDRDGRVNFANPV
                     AEAILGRSTDELVGHALPDVFKPIDERTRAPIELPSPNEVLAGKSTPLIEGAAIVGPN
                     GECPIEDSLSPIVDDNGQLLGAVIVFRDVTEARRMRERVALSERLASLGTLAAGVAHE
                     INNPL"
BASE COUNT          363 a          730 c          639 g          322 t
ORIGIN      
        1 cgccgaaccg tactccgccg tgctcgaatc actcgacgcc gagctcgcca agcgctggcg
       61 cggcctcggc ttggagctca gcccgtgacc aagaatctgc cggcgcagct cacgcgcgat
      121 cagagcgacg tcgagctcga acgccgcttc cgcgcgatgg ccgatcacgc gcccgtgctg
      181 ctctggatgg cgggcaccga cggcctttgc aacttcttca accagcgctg gctcgagttc
      241 acgggcaaac ccgtcgagca ggagctcggc agtggctggg ccgcgggcgt ccaccccgaa
      301 gacttccaac attgcatgac gctttacctc gagtcgttcg tcgcgcgcgt cgccttttcc
      361 atggaatatc gcctgctgcg cgcggacggc cagtaccgct gggtctacga tcaaggcgct
      421 ccgcgtttcg aacccgacgg caccttcgcg gggttcatcg gctcctgcac cgacatcacc
      481 gaacagcgcc tcgcgcgtga cgcgctcggc aaaatgaacc tcgagctcga ggatcgcgtg
      541 cgggagcgca ccgccatcgc ccatgagcgc gaagtcttgc tgcgcgaagt gcaccatcgc
      601 gtcaagaacg acctgcagct gatctcgagc gtgctcagta tgcaggcgcg ccgcctggtc
      661 gatgccgcgt ccgccgaagc gctcgccgag tgtcagagcc gggtccaaac catcgcgctc
      721 attcacgaat acatgtacca atcggagaac ctcgcgcgct tgccgctctc gcgcaacgtg
      781 cgcgggctcg cggcgaacct cgtgcgggcc ggcggcgcgc cgggcagctc catcggcctc
      841 gagctcgacg tggaagaaga catcacgctc cccgtcgacc gcgcgatccc gtgcggactc
      901 atcctcaacg agcttttgac caacgcgctc aaacacgcgt tccccgcagg caggcgcggc
      961 aagatgcgcg tcacgttgcg gcgtgagggt cccgaaatgc tgctgctcgg ggtcgccgac
     1021 gacggcgtcg ggctcgccga ggatcacgag gacaacgcga acggctcgct cggctttcgc
     1081 ctggtgcgcg ccttcgccga acaactcggc gccacggtgc gcgtctcgcg cgacgtgggc
     1141 acgagcgttg aggtcttatt ccgtccggag gggtagctcg gactggaacg aagagaagga
     1201 gcgacgggca gatggcggcg atattggtag tggaagacga acgagtggtg gcacgcgaca
     1261 tcgaggagtc gctcatgcgc atggggtacg acgtcgtcgg cttggcggcg tcctcgaccg
     1321 aatgcctggc ccatgcggaa gaacgacgcc ccgatctcgt cttgatggat atccgcatcg
     1381 aaggcgcact cgacggcatc gagacggcgc gcctgctgcg ttcgcgcttc gacgtacccg
     1441 tcatcttcct cacggcgtat gccgacgacc aaaccgtcgc gcgcgccaaa gagacggagg
     1501 cgctcggcta cattttgaag ccgttccgcg ccggcgagct caagagcgcc gtcgaaatcg
     1561 cgctcttcaa gcacgagatg gaaatgcgcc tgaagctgcg cgaacgctgg tttgcgacca
     1621 cgctccgcgc catcggcgac gcggtcgtcg ccgtcgatcg cgacgggcgt gtcaacttcg
     1681 cgaaccccgt cgccgaagcc atcctcggcc gctccacgga cgagctcgtc gggcacgccc
     1741 tgcccgacgt cttcaaaccc atcgacgaac gcacgcgcgc ccccatcgaa ctgccctctc
     1801 cgaacgaagt actcgccggt aagagcaccc cactcatcga aggcgccgcc atcgtcgggc
     1861 ccaacggcga atgcccgatc gaagacagcc tctcgcccat cgtcgacgac aacggccaac
     1921 tgctcggcgc cgtcatcgtc ttccgcgacg tgaccgaagc acgccgcatg cgcgagcgcg
     1981 tcgccctctc cgagcgcctc gcctcgctcg gcacgttggc ggccggcgtc gcccacgaaa
     2041 tcaacaaccc cctc
//
LOCUS       DATIML010001004         3217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3964602, whole genome shotgun sequence.
ACCESSION   DATIML010001004 DATIML010000000
VERSION     DATIML010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3217
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3964602"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..2886)
                     /locus_tag="VLJ38_17340"
     CDS             complement(91..2886)
                     /locus_tag="VLJ38_17340"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF004349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HSU41347.1"
                     /translation="MAELPKAYEPASVEPHWYAFWEEHGVFRASLDPKDTRPVYVIPM
                     PPPNVTGSLHMGHALYTIQDVIIRHARMRGFNALWQPGIDHAGISTQVVVERQLKREG
                     KTRHDLGREAFIERVFAWKEQSGGRILQQMRVLGFSADWERSKFTMDADMSRAVREAF
                     VRLYEEGLIYRATRLVNWDVESQTVLSDLEVETEENVQGELYEFAYPVLDADPALGAT
                     ELVVATTRPETMLGDTAVAVHPDDPRYTHLHGKKLKHPFVAREIPVITDPVLVDMAFG
                     TGAVKVTPAHDFNDFATGKRHGLAEISVIGPNGTMNAESGEFAGLDRFAARKAVKKRL
                     AELGLARGSKPHTMTLPRSQRTNSVVEPMISTQWFVKMEPLAVPALEAVRSGRTRIVP
                     EEWVKTWEHWLTNIQDWCISRQLWWGHQIPAFYCGACNHVNVTRDDPKACEKCGSADL
                     KRDADVLDTWFSSGLWPFSTLGWPDKTLALERFYPASDLETGYDILFFWVARMLMLGL
                     KFMGDVPFRRVLLHGMVVDETGDKMSKVKGNTLDPLDLVHGAEFENVVKKSAPDAPLE
                     EALVKFKKAYPSAAQMGKGFAAYGTDALRLTLVSYSPQAKRIALSPARIDGYRRFCNK
                     LYNATRFALTYVEGETPSGEVPAATLLQNRWILSRFARAVTASSTGIEEFRLDDGSGA
                     LYHFVWDELCDWFLEMSKPVFAQGTDAEKHETRAVLAHVLEGSLRALHPYAPFVTEEL
                     WQRLPRPASRPVSIALAPYPTTADGRPDDDAERDMALLMSAIGAARASRSEHGVHPSA
                     KVPLELRSGEPRARELFMTQARSIEFLVGTAGSVVVAAPGGARPAGTVLEVTGDIEVL
                     VGLRGLVEKTKEEERIERGLKSVEKDIGVMTKRLENKNFVANAPPEVVAEAKQQLAQL
                     ERQRARLLEARGLVDEL"
     gene            complement(2974..>3217)
                     /locus_tag="VLJ38_17345"
     CDS             complement(2974..>3217)
                     /locus_tag="VLJ38_17345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41348.1"
                     /translation="AAPTPPTAPIALAPSRAPAAAAGTNGAEFAQKLGGLGLTPQQVD
                     AVLSLSREVIERAVWEVVPTLAETLIREEIQRLMKE"
BASE COUNT          462 a         1061 c         1123 g          571 t
ORIGIN      
        1 tgtgccttgg tcagctcgcg tccggcctcg cccgctcgtc gcgttcgggg tgtcgcggcc
       61 cggaccgatc gtgacggggc tgcaccccac ctagagctca tcgacgagac cgcgcgcttc
      121 gaggagccgc gcgcgctggc gctcgagctg cgcgagttgc tgcttggctt ccgccacgac
      181 ttcgggcggc gcgttcgcga cgaagttctt gttttcgagc cgtttggtca tgacgccgat
      241 gtccttttcg acgctcttta ggccgcgctc gatgcgttcc tcttctttgg tcttctcgac
      301 caagccgcgc aggccgacga gcacttcgat gtcgccggtg acctcgagca cggtgccggc
      361 gggtcgggcg ccgcctggag cggctacgac gacggatcca gccgtgccca ccaaaaattc
      421 aatcgaacgc gcttgggtca tgaagagctc gcgggcgcgc ggctcgccgc tgcggagctc
      481 gagcggcact ttggcgctcg ggtgcacgcc gtgttcgctc cgcgacgccc gcgccgcgcc
      541 gatcgcgctc atgagcagcg ccatgtcgcg ctcggcgtcg tcgtccgggc ggccgtcggc
      601 cgtcgtgggg tacggcgcga gcgcgatgga cacggggcgc gacgccgggc gcggcaggcg
      661 ttgccagagc tcttcggtga cgaacggcgc gtacggatgc agcgcgcgca gcgaaccctc
      721 gagcacgtgc gcgagcacgg cgcgcgtctc gtgcttctcg gcgtccgtcc cctgcgcgaa
      781 gacgggcttc gacatttcga ggaaccagtc gcagagctcg tcccatacga agtggtagag
      841 cgcgccggag ccgtcatcga gccggaactc ttcgatgccc gtgctgctcg ccgtgacggc
      901 gcgcgcgaag cggctcaaga tccagcggtt ttgcagcagc gtggcggccg gcacctcgcc
      961 gctcggcgtt tcgccttcga cgtaggtgag cgcgaagcgc gtcgcgttgt agagcttgtt
     1021 gcagaagcgg cggtagccgt cgatgcgcgc gggcgagagc gcgatgcgct tggcttgcgg
     1081 cgagtagctg acgagcgtga gccgcaacgc gtcggtgccg tacgcggcga agcccttgcc
     1141 catctgcgcg gccgacggat acgccttctt gaacttgacg agcgcttcct cgagcggcgc
     1201 gtcgggcgcc gattttttga cgacgttctc gaactcggcg ccgtgcacca ggtcgagcgg
     1261 gtcgagcgtg ttgcccttga ccttgctcat cttgtcgccc gtttcgtcga cgaccatgcc
     1321 gtgcaggagc acgcgccgga acggcacgtc gcccatgaat ttgagcccca gcatcagcat
     1381 gcgcgcgacc cagaagaaca ggatgtcata accggtctcg aggtcgctcg ccgggtagaa
     1441 gcgctcgagc gcgagggtct tgtcgggcca gccgagcgtc gagaacggcc agagaccgct
     1501 cgaaaaccag gtgtcgagca cgtcggcgtc gcgcttcaga tccgcgctgc cgcacttttc
     1561 gcacgccttc ggatcatcgc gcgtcacgtt cacgtggttg cacgcgccgc aataaaacgc
     1621 cgggatctgg tgcccccacc agagctggcg cgagatgcac cagtcttgga tgttcgtgag
     1681 ccagtgctcc caggtcttca cccactcttc gggcacgatg cgcgtgcggc cgctgcgcac
     1741 cgcttcgaga gcgggcacgg cgagcggctc cattttgacg aaccactgcg tcgagatcat
     1801 gggctcgacg acgctgttcg tgcgctgcga gcgcgggagc gtcatcgtgt ggggtttcga
     1861 accgcgcgcg aggccgagct cggcgagccg cttcttgacg gccttgcgcg ccgcgaagcg
     1921 atcgagcccc gcgaactcgc cggactcggc gttcatcgtg ccgttcgggc cgatcacgga
     1981 gatttcggcg aggccgtggc gtttgcccgt cgcaaagtcg ttgaagtcgt gggcaggcgt
     2041 gaccttcacg gcgccggtgc cgaacgccat gtcgacgagc accggatcgg taatcacggg
     2101 gatttcgcgc gcgacgaagg gatgcttgag cttcttgccg tggaggtgcg tgtagcgcgg
     2161 gtcgtcgggg tgcacggcga cggcggtatc gccgagcatg gtctcggggc gcgtcgtcgc
     2221 gacgacgagc tcggtcgcgc cgagcgcggg atcggcgtcg agcaccgggt acgcgaactc
     2281 gtagagctcg ccctgcacgt tctcttcggt ttcgacctcg agatcggaga gcacggtttg
     2341 cgactcgacg tcccagttga cgagccgcgt cgcgcggtag atgagcccct cttcgtagag
     2401 tcggacgaag gcctcgcgca cggcgcgcga catgtccgcg tccatcgtga acttcgagcg
     2461 ctcccagtcg gcggagaagc cgagcacgcg catctgctgg aggatccgcc cgccgctctg
     2521 ctctttccag gcgaacacgc gctcgatgaa cgcctcgcgc ccgagatcgt ggcgcgtctt
     2581 gccttcacgc ttgagctgcc gttcgacgac gacttgcgtc gagatgccgg cgtggtcgat
     2641 gcccggctgc cagagcgcgt tgaagccgcg catgcgcgcg tggcggatga tgacgtcctg
     2701 aatcgtgtag agcgcgtgcc ccatgtggag cgaccccgtc acgttcgggg gcggcatcgg
     2761 gatcacgtag acgggccgcg tgtccttcgg atcgagcgac gcgcgaaaca cgccgtgctc
     2821 ttcccaaaac gcgtaccagt gcggttctac gctcgcgggc tcataggcct tcggcagctc
     2881 agccattgcg gggctcacta gtgcaccgcg gccgcgatgg gtgcaagcgc tgctagcggc
     2941 cgcgtttcgc cgctaaacgg gcggtccgcc cgctcactct ttcatcaacc gctggatttc
     3001 ttcgcgaatc agcgtttcag ccagcgtcgg cacgacttcc cacacggcgc gctcgatcac
     3061 ttcgcgcgag aggctcagga cggcgtcgac ctgctgcggc gtgagtccga gcccgccgag
     3121 cttctgcgcg aactcggcgc cgttcgtgcc cgccgcggcg gcgggcgctc gcgagggtgc
     3181 gagcgcgatc ggagccgtgg gcggcgtggg ggctgcg
//
LOCUS       DATIML010001005         3100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5417961, whole genome shotgun sequence.
ACCESSION   DATIML010001005 DATIML010000000
VERSION     DATIML010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5417961"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1785
                     /locus_tag="VLJ38_17350"
     CDS             <1..1785
                     /locus_tag="VLJ38_17350"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSU41349.1"
                     /translation="YESVAEANAKINHALASWRPHAAMDLSWLRFTRASYACLALWTE
                     PVDGSPRSLEVVGEYAAEAGTECLRGSSHLPSHFPPRRVGELVSGLGKRHVFTMVAVK
                     SGTRDRGLLAIAAPIEIELLDRVGNAGDWAAQVGAALERAEIDQQLRKNAFQDALTGL
                     PNRALLMERLETFALERPDRSFAVLFLDLDDFKKINDSKGHSAGDQLLIAIAGRLERA
                     VGDAGFVARLGGDEFGVVVPCAEGTRDALAQVAALQTALRAPFVLDGDVVFISCSIGV
                     ALASKENASPAALLRDADTAMYRAKLEGPGHWEVFRHGMHTHAVERLRLDSRLRQALE
                     REEFALVYQPIVALSDGRPLSAEALIRWHHPEQGLVSPARFLAVAEEVGLSIPIGKWA
                     LATACRAAKSWQREGAAPVYVSVNVAAEHLLSPGFVDLVESLLIENGLSPEALGLELV
                     ERSLAHERDLTIRVLGRLQDLGVRVAIDDFGTGYSSLSYLKDFPVSVLKIDRSFVHGL
                     ATDARDSAIVHAIITMARGLGLGVVAEGIETEEQLEALEAQGCDAVQGYLLSRPLDLA
                     ACRTFLANEQPTVARQSPSQRAAALRVV"
     gene            1854..>3100
                     /locus_tag="VLJ38_17355"
     CDS             1854..>3100
                     /locus_tag="VLJ38_17355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HSU41350.1"
                     /translation="MPLADATLSVALLGPTNTGKTHRAVERMLEHASGMIGLPLRLLA
                     REVYDRVSARIGEERVALVTGEEKRVPRRPDYWVCTTEAMPLAREVDFVAIDEIQLAT
                     HDERGHVFTERLLHARGRRESWFMGSSAMRQMVERLVPAARHEEHPRLSRLSYAGASK
                     LSRLPPRSAVVAFSIPELYRLAAKLRAFRGGAAVVLGALSPRARNAQVAMFQAGEVDY
                     LVATDAIGMGLNLDVTHVAFASLRKFDGRGERSLAGGELAQIAGRAGRYLRDGTFGTV
                     APLELGRETSQHIEQHRFELVRRVRYRNAELDYSSAAALLASLEAPPPAPHLLAVPAA
                     VDHAALRALLADPEIALLAKRGPGLELLWQVCQIPDFRKILFEVHVELLRDVYLRLVR
                     GPLADDYVAALLQEFEDERGDVDT"
BASE COUNT          460 a         1097 c         1058 g          485 t
ORIGIN      
        1 tacgagtccg tcgccgaggc gaacgcgaag atcaaccacg cgctcgccag ctggcgaccc
       61 cacgccgcga tggatctctc ctggctgcgc ttcacgcgcg catcctacgc ctgcctcgcg
      121 ctttggaccg agccggtcga cggctctccg cgctcgctcg aagtggtcgg cgaatatgcg
      181 gcagaagcag gcaccgagtg cctgcgtggc tcgagccacc tgccgtcgca ttttccgcca
      241 cgccgcgtcg gtgagctcgt gagcggcctc ggcaaacgcc acgtcttcac gatggtggcg
      301 gtcaagagcg gcacgcgcga ccgcggtttg ctcgccatcg ctgctcccat cgagatcgag
      361 ctcttggatc gtgtgggcaa cgccggcgac tgggcggccc aagtgggtgc ggcgctcgag
      421 cgcgccgaaa tcgatcagca gctccgcaag aacgccttcc aggatgcgct cacgggtttg
      481 ccgaatcgcg cgctcttgat ggagcggctc gaaacgttcg cgctcgaacg acccgatcgc
      541 tcgtttgcgg tgctcttctt ggacctcgac gacttcaaga agatcaacga cagcaagggc
      601 cactcggcag gtgaccagct gctcatcgcg atcgcgggcc ggctcgagcg tgccgtgggc
      661 gacgctggct tcgtggcgcg gctcggcggc gacgagttcg gcgtcgtcgt tccgtgcgcc
      721 gaggggacgc gggacgcgct cgcgcaagtg gcagcgctgc agacggcgct ccgcgcgccg
      781 ttcgtgctcg acggcgacgt cgtcttcatt tcgtgcagca tcggcgtcgc gctcgcgagc
      841 aaggaaaacg cctcgcccgc cgcgctcctg cgtgacgccg acaccgccat gtaccgcgcg
      901 aaactcgagg ggccgggcca ctgggaggtt ttccgtcacg ggatgcacac gcacgcggtc
      961 gagcgcttgc gcctcgactc gcgtctacgc caagcgctcg aacgcgagga gttcgcgctc
     1021 gtctaccagc cgatcgtcgc gctctcggac ggtcggcccc tcagcgcgga ggccctgatc
     1081 cgctggcacc accccgagca aggcttggtg tcgcccgcgc gcttcctggc cgtggccgag
     1141 gaagtggggc tctcgattcc gatcggcaaa tgggcgctcg cgacggcctg tcgcgccgcg
     1201 aagagctggc aacgtgaagg cgctgcgccg gtttacgtga gcgtcaacgt cgcggccgag
     1261 cacctcttga gcccgggctt cgtcgacctc gtcgagagct tgctgatcga aaacggcctg
     1321 agccccgagg cgctcggcct cgagctcgtg gagcgcagtc tggcgcacga gcgcgatctc
     1381 acgattcgcg tgctcggtcg cttgcaggat ctcggagtcc gcgtcgcgat cgacgatttc
     1441 ggcaccggct actcttccct gagttacctc aaggatttcc cggtgagcgt cctcaaaatc
     1501 gaccgcagct tcgtgcacgg gctcgcgacc gacgcgcgcg acagcgccat cgtccacgcc
     1561 atcatcacga tggcgcgggg tctcgggctg ggcgtcgtgg ccgagggcat cgagacggaa
     1621 gaacagctcg aggcgctcga ggcccagggc tgcgacgccg ttcagggcta cctcttgagt
     1681 cggcccctcg acctcgcggc gtgccgcacg ttcctcgcga acgagcagcc caccgtggcg
     1741 cgccaatcac cgagccagcg ggcggcggcg ctccgggtcg tctaataaag ctcggcgagc
     1801 cgccgcaggc gcggcgacta gccgagcggc tcgcgagcgg ccatgctccg agcgtgcccc
     1861 tggcggacgc cacgctgagc gtcgcgctgc tcggccccac gaatacgggc aagacgcacc
     1921 gcgccgtcga acgcatgctc gagcacgcga gcgggatgat cggcttgccg ttgcggctcc
     1981 tggcgcgcga ggtgtacgac cgcgtgagcg cgcggatcgg ggaagagcgc gtcgcgctcg
     2041 tgacgggcga ggaaaaacgc gtgccgcgcc ggcccgacta ctgggtgtgc acgaccgaag
     2101 cgatgccgct cgctcgcgag gtcgacttcg tggccatcga cgagatccag ctcgccacgc
     2161 acgacgagcg cgggcacgtc ttcaccgagc gcctgctgca cgcccggggc cgccgcgaga
     2221 gctggttcat gggctcgagc gcgatgcggc agatggtcga gcgactcgtg cccgcggcgc
     2281 gccacgaaga gcacccgcgc ctctcgcgcc tgagctacgc gggcgccagc aagctttcgc
     2341 ggctgccgcc gcgcagcgcc gtcgtggcgt tctcgatccc cgagctctat cggctcgcgg
     2401 ccaagctgcg cgcgtttcgc ggcggcgccg ccgtcgtgct cggcgcgctt tcaccacgcg
     2461 cgcgcaacgc gcaggtcgcc atgtttcaag cgggcgaagt cgactacctc gtcgcgaccg
     2521 acgccatcgg catggggttg aatttggacg tgacgcacgt cgcgttcgcg tcgctgcgca
     2581 aattcgacgg tcggggagaa cgctcgctcg caggcggcga actcgcgcaa atcgccggcc
     2641 gggcgggccg ctatttgcgc gacggcacgt tcgggacggt ggcgcccctc gagctcgggc
     2701 gcgagacgtc tcagcacatc gagcaacacc gcttcgagct cgtgcgtcgc gtccgctacc
     2761 gcaacgcgga gctcgactac tcgtccgccg cggcgttgct cgcgagcctc gaggcgcccc
     2821 cgcctgcgcc ccaccttctg gccgtgccag cggcggtcga ccacgccgcc ctacgcgccc
     2881 tgctcgccga cccagaaatc gcgctgctcg ccaaacgcgg cccggggctc gagctgctct
     2941 ggcaagtctg ccaaatcccg gattttagga agatcctgtt cgaagtgcac gtcgagctct
     3001 tgcgcgacgt gtacctgcgg ctcgtgcgcg gcccgctcgc cgacgactac gtggcggcgc
     3061 tgctccagga gttcgaagac gagcgcggcg acgtcgacac
//
LOCUS       DATIML010001006         6130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1082965, whole genome shotgun sequence.
ACCESSION   DATIML010001006 DATIML010000000
VERSION     DATIML010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6130
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1082965"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VLJ38_17360"
     CDS             complement(<1..280)
                     /locus_tag="VLJ38_17360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41351.1"
                     /translation="MSLRSVVCTALLAALACSRLPSYARPEGALVEPGTVDDSDLIPY
                     RKLTRADFKGKRPSGEAADHVDAMGAQTYAIVRPNLSLRIEIVGTPQSN"
     gene            complement(277..1185)
                     /gene="hemC"
                     /locus_tag="VLJ38_17365"
     CDS             complement(277..1185)
                     /gene="hemC"
                     /locus_tag="VLJ38_17365"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HSU41352.1"
                     /translation="MARLVYATRRSKLALAQSRAFVARIAKLEPLLAIEELTVVTTGD
                     RVQDRPLSEIGGKGLFVKEIEQSLADGLADIAVHSSKDVPAELAPGLVISCFPEREDA
                     RDVLVSRSGASLLELPAGSRVGTTSFRRSLQLKHRRPDLVIVPLRGNVDTRLRKCDEG
                     EVDAIMLARAGLVRLGLAERATEILDPSMCLPAIGQGALAVEQRAGDERVARLLAPLA
                     HAETSVAVSAERGVMLAVGGDCQTPVAAYGVRSGAELWLRALLADPDGSNLRRAERRA
                     AWPRSDAEAFTLGRELGDELRRSSAR"
     gene            complement(1185..2645)
                     /gene="hemA"
                     /locus_tag="VLJ38_17370"
     CDS             complement(1185..2645)
                     /gene="hemA"
                     /locus_tag="VLJ38_17370"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HSU41353.1"
                     /translation="MITVVGLSHKSAPIEVRERFALPADRVPELLRGVVDRPAVGEAL
                     LVSTCNRVELVAAPRAGASLEAVASASREALSALAPNAPETALYALTGGAAVRHLFGV
                     AASLDSLVLGEPQILGQVKEAYEVARKTGTVGSVLHRTLARAIRAAKRVRSGTSIGAG
                     QVSVPSVAVDFARRIFGDLRGRTVLLVGSGEMAETVARSLLSSGSRLLVVGRTPEKVR
                     ALAESFGGEPCAWAELALALERADVVITSTSAPGFVIEPGHVASARKKRRGQSQFFID
                     LAVPRDVNPEIESLDGIFLYNVDDLSRIVSESLLTRGREAVQAYSIIDDEARSFDRWA
                     DAEQATPLIVALRERIRGALKFELERSLRGRLRHLGAPEREALDTMLDAAVNRVLHEP
                     TTRLRQAASIGELDTLPFPELSAALGHAFALDSTRAPGEPARSERAENGSQPSVPRSS
                     AGDLDAASSDPHAAELDATLELEPSDDAPAGIGSSR"
     gene            complement(2642..3463)
                     /gene="ccsA"
                     /locus_tag="VLJ38_17375"
     CDS             complement(2642..3463)
                     /gene="ccsA"
                     /locus_tag="VLJ38_17375"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HSU41354.1"
                     /translation="MDALATVAFYLGVIAYSAASTLFFLDLARQTAPGPRSTWGPRVL
                     AAGAVLHAVHVVVASLLLNRCPVESLHFGLSFSALVAVAAFLLLRRHANLDPMGVLVA
                     PIALTFLVGAQFVGVDLPSEALISRPLLVLHVTANVLGLGIFLVAGAAGSLYLWQERR
                     LRDKRAGGMASRLPSLDALDRATHRLLLIGFPLLTFGVVTGAIFSRELSTFAGAALAR
                     TLFGFATWFLLAGVLVLRRLAGVRGRRAAYGTVAGVLCVLIVLVIYVVRPGGPGT"
     gene            complement(3463..3840)
                     /locus_tag="VLJ38_17380"
     CDS             complement(3463..3840)
                     /locus_tag="VLJ38_17380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41355.1"
                     /translation="MGKSRVFFPQDVLDRWVEHGEAELTGAELWVRSERRRYRVVEAV
                     RVVREVSGAPDAFDMAGSVKTFGFVSELGAELLGDSMIVGDNAYETVLGWLGTVIAPA
                     GAAAGIGAGSGEYVARFLRGNGR"
     gene            complement(3906..5288)
                     /locus_tag="VLJ38_17385"
     CDS             complement(3906..5288)
                     /locus_tag="VLJ38_17385"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HSU41356.1"
                     /translation="MRLVLPSVVASVVLGTGAALAQAPGPTDPNAPSQAPAQAPSAPA
                     QPPTIVTNNGLGGILIGPRLPDPNASLPSSSQPKNGNATDTFDLNKGSSGPTVVGNPN
                     GSAVLSEGGAGEPGRRPIPPIHLVRHGDTLWDLSDAYYGNPWQWPRIWTMNPQVTNPH
                     WIYPGDQLRLQPGDGSSVYDRLGAGGPDSGGSGSGAQGLVNRRQRLARDTVVLRDQGY
                     IGDVDKDTWGQVAGSPEEQMLLTEGNHVFLLLKSDKVARPGEELTIFRNIRPADHVEG
                     GRKPAGEVVKVLGTVKLDRVDTKTHIARGLITESLDIVERGAKVGPVRRKFDVVPPLK
                     SDKAIAAHVLNSFYPHVYVAQNQVVFLDRGSQDGLKAGNRLVVLRRGDTWRKSIDAKM
                     SRTRLQLDSDEVVHFDDTPLLGDDKDFPEEAVAELRVLSTEPTTSLAFIVQSRRELVP
                     GDTATTRPGF"
     gene            complement(5291..5710)
                     /locus_tag="VLJ38_17390"
     CDS             complement(5291..5710)
                     /locus_tag="VLJ38_17390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41357.1"
                     /translation="MGCAADKDHVEKQLAKLKDDVRHMQSETDRMAERLDAMEARQAA
                     APRANEERVASNVPAIVRPKLKIVRMEPGEENAADDASEAGAQPLQDDSGPRVLIRGE
                     GTSVETRMFSGATPPPSAKTSKSDSGKTRKADATPSK"
     gene            5867..>6130
                     /locus_tag="VLJ38_17395"
     CDS             5867..>6130
                     /locus_tag="VLJ38_17395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSU41358.1"
                     /translation="MGPRRTRRQPNRPRPKVDLRKTLFVLPNLITLGSVFCGFNAIRL
                     VALERPTDDDVYRAAVLLIFAMLFDLMDGRVARMTKTQSAFGLQ"
BASE COUNT          991 a         2093 c         2162 g          884 t
ORIGIN      
        1 cgttcgattg aggagtgccc acgatctcga tgcgcaagct caagttgggg cgcacgatgg
       61 cgtaggtttg ggcgcccatg gcgtcgacgt ggtcggccgc ttcacccgaa ggccgtttgc
      121 ctttgaaatc ggcgcgcgtg agtttgcgat acgggatgag gtcggagtcg tcgaccgtac
      181 cgggctcgac gagcgcgccc tcggggcggg cgtaggacgg caggcgggag caggcgagcg
      241 cggcgaggag cgcggtgcag acgaccgagc gcaagctcaa cgtgcggagc tccttcggag
      301 ctcgtcgccg agctcccgac cgagggtaaa ggcttcggcg tcgcttcgcg gccatgcggc
      361 gcggcgttca gcgcggcgaa ggttcgagcc gtcgggatcg gcgagcagcg cgcgcagcca
      421 gagctcagcg ccgctccgga cgccgtacgc cgcgacgggc gtctggcaat cgccgcccac
      481 ggcgagcatc acgccgcgct cggccgaaac ggcgacgctc gtctccgcgt gcgcgagcgg
      541 cgcgagcagg cgcgcgacgc gttcgtcacc ggcgcgctgt tcgaccgcga gcgcgccctg
      601 accgatggcg ggcaaacaca tggacggatc gaggatctcc gtggcgcgct cggcgagccc
      661 gagccgcacg aggccggcgc gcgcgagcat gatggcgtcg acctcgccct cgtcgcactt
      721 tctcaagcgc gtatcgacgt tgccgcgcaa cggcacgatc accaaatccg gccggcggtg
      781 cttgagctgt aacgagcggc gaaacgacgt ggtgccgacg cggctccccg cggggagctc
      841 gagcaggctc gcaccggagc gcgacacgag cacgtcgcgc gcgtcctcgc gttcggggaa
      901 acagctgatg acgagaccgg gcgcgagctc cgcgggcacg tctttcgacg agtgcacggc
      961 gatgtcggcg agcccgtccg caaggctctg ctcgatttcc ttcacgaaca gccctttgcc
     1021 gccgatttcc gagagcggcc gatcctgcac gcggtcgccc gtcgtgacga ccgtgagctc
     1081 ttcgatcgcg agcagcggct cgagcttggc gatgcgggcg acgaacgcgc gtgactgcgc
     1141 gagggcgagc ttgctgcggc gcgtggcgta gacgaggcga gccatcagcg cgagctcccg
     1201 attcccgccg gggcatcgtc ggacggctcg agctcgagcg ttgcatcgag ctcggcggcg
     1261 tgcgggtcgg agctcgcggc atcgaggtcg ccggcactcg agcgcggcac cgacggctgc
     1321 gaaccatttt cggcccgctc tgaacgcgca ggttctcccg gagcgcgcgt cgagtcgagc
     1381 gcgaacgcat gcccgagggc ggcgctgagc tccgggaacg ggagcgtgtc gagctcaccg
     1441 atactggccg cctggcggag gcgcgtggtc ggctcgtgca ggacgcgatt gacggcggcg
     1501 tcgagcatgg tgtcgagcgc ctcacgctcc ggcgcgccga ggtgccggag ccgcccgcgc
     1561 aagctgcgct cgagctcgaa cttgagcgcg ccgcgaatgc gctcgcgcag ggccacgatg
     1621 agcggcgtcg cctgttcggc gtcggcccag cgatcgaagc tgcgcgcctc gtcgtcgatg
     1681 atcgaatacg cctgcacggc ttcccgcccg cgcgtgagca gggattcgga cacgatgcgc
     1741 gagagatcgt ccacgttgta gagaaagatg ccgtcgaggc tctcgatctc cgggtttacg
     1801 tcacgcggca ccgcgaggtc gatgaaaaac tgactctgtc cgcggcgctt cttacgcgcg
     1861 ctcgccacgt gcccgggttc gatcacgaag cccggcgcgc tcgtgctcgt gatcacgacg
     1921 tcggcgcgct cgagcgcgag cgcgagctcg gcccaagcgc acggctcgcc accgaagctc
     1981 tcggcgaggg cgcgtacctt ttcgggcgtg cggccgacca cgagcaaacg cgagccggag
     2041 gacaggagcg agcgcgcgac ggtttccgcc atttcgcccg aaccgacgag caagacggtg
     2101 cgcccgcgca gatcgccgaa aatgcggcgt gcgaaatcga cggccacgct cggcaccgac
     2161 acctgacctg cgccgatcga cgtaccggaa cgcacgcgct tggcggcgcg gatcgcgcgc
     2221 gcgagcgtgc ggtgcaagac cgagcccacc gtgcccgtct tgcgcgcgac ctcgtacgcc
     2281 tccttcactt ggccgaggat ttgaggctcg ccgagcacga gcgagtcgag cgacgccgca
     2341 accccgaaca aatgccgtac cgcggcgccg cccgtgagcg cgtagagcgc cgtctccggc
     2401 gcgttcggcg cgagcgcgct caaggcttcg cggctcgcgc tcgcgaccgc ctcgagactc
     2461 gcgcccgcgc gcggcgccgc gacgagctcg acgcgattac aggtcgaaac gagcagcgcc
     2521 tcacccacgg caggtcgatc cacgacgcca cgcaggagct cgggcacgcg gtccgccggc
     2581 agcgcgaaac gctcgcgcac ctcgatgggc gcgctcttgt gcgaaagtcc gacgacggtg
     2641 atcacgtgcc gggccccccg gggcgcacca cgtaaatcac gagcacgatc agcacgcaga
     2701 gcacgccggc gacggtgccg tacgccgcgc gccgcccgcg cacgcccgcg agccgccgca
     2761 acacgagcac accggcgagc aggaaccagg tcgcgaagcc gaacagcgtg cgcgcgagcg
     2821 cggcgccggc gaaggtcgag agctcgcgag aaaagatcgc ccccgtgacg acaccgaacg
     2881 tgagcagcgg aaagccgatc aagagcaggc ggtgcgtcgc gcgatcgagc gcgtcgaggg
     2941 acggcaggcg cgacgccatg ccgcccgcgc gtttgtcgcg caaacgccgc tcttgccaga
     3001 ggtagagcga gcctgccgcg ccggcgacga ggaagatgcc gagcccgagc acgttggccg
     3061 tcacgtgcaa gacgagcagc ggccgggaga tgagcgcctc ggacgggaga tccacgccga
     3121 cgaattgcgc gcccacgagg aaggtgagcg cgatcggcgc gaccaagacg cccatcgggt
     3181 cgaggttcgc gtgacggcgg agcagcagaa aggccgcgac ggcgacgagc gcgctgaagc
     3241 tcaaaccgaa atgcagcgac tcgaccgggc agcggttcaa gagcaggctc gcgacgacga
     3301 cgtgcaccgc gtgaaggacg gcgccggccg cgaggacgcg cgggccccac gtcgagcgcg
     3361 gtccgggcgc ggtctgccgc gccaaatcga ggaaaaagag cgtgctcgcc gccgagtacg
     3421 cgatgacgcc cagataaaac gcgaccgtcg cgagcgcgtc catcagcgcc cgttgcctcg
     3481 cagaaagcgc gcgacgtatt cgccactgcc cgcgccgatg ccggcagcgg cccccgcggg
     3541 cgcgatcacc gtcccgagcc agccgaggac cgtctcgtac gcgttgtcac ccacgatcat
     3601 cgaatcgccg agtagctccg cgccgagctc gctcacgaag ccgaacgtct tcaccgagcc
     3661 cgccatgtcg aacgcgtcgg gcgcgcccga cacctcgcgc accacgcgca cggcctcgac
     3721 gacgcgatag cgccgccgct cggaacgcac ccagagctcg gccccggtga gctccgcttc
     3781 gccgtgctcg acccagcgat cgagcacgtc ttgcgggaag aagacccggc ttttgcccat
     3841 gtcccgccat tctactcggc cggcacgccc ccgcacgcag ccgcgcgcac agcgacaaag
     3901 gccggctaaa agcccggtcg cgtcgtggcg gtgtcgcccg ggacgagctc ccgccgcgac
     3961 tgcacgatga acgcgaggct cgtcgtgggt tcggtcgaga ggacgcggag ctcggccacg
     4021 gcctcttcgg ggaaatcctt gtcgtcgccg agcagcggcg tgtcgtcgaa gtgaacgacc
     4081 tcgtccgagt cgagctgcag ccgcgtgcgc gacatcttcg cgtcgattga tttgcgccag
     4141 gtgtcgccgc gccggagcac gaccaggcgg ttgcccgcct tcaagccgtc ttggctcccg
     4201 cggtcgagga acacgacttg attctgtgcg acgtagacgt gcgggtaaaa gctattgagc
     4261 acgtgggcgg cgatcgcctt gtcgctcttc agcggcggca cgacgtcgaa ttttcgccgc
     4321 acggggccga ctttggcgcc gcgctcgacg atgtcgagcg attcggtgat gaggccgcgc
     4381 gcgatgtgcg tcttcgtgtc cacgcggtcg agcttgacgg tgccgagcac tttgacgact
     4441 tcgccagccg gcttacgccc gccttcgacg tggtcagccg ggcggatgtt gcgaaaaatc
     4501 gtgagctcct cgcccgggcg cgcgaccttg tcggacttga gcagcaaaaa gacgtggttg
     4561 ccctcggtga gcagcatttg ctcctcgggc gagccggcga cctgccccca ggtgtctttg
     4621 tcgacgtcgc cgatgtagcc ctgatcgcgc agcacgacgg tgtcgcgcgc gagacgctgg
     4681 cgccgattga cgaggccctg cgcgccggag cccgagccgc cgctatcggg gccgcccgcg
     4741 cccaaacgat cgtaaaccga ggagccgtcg cccggttgca ggcgcagctg atcgccgggg
     4801 taaatccagt gtggattggt gacctgcggg ttcatcgtcc agatgcgcgg ccactgccag
     4861 ggattgccgt aataggcgtc ggacaggtcc cagagcgtgt cgccgtgacg gacgaggtga
     4921 atcggcggaa tcggcctgcg cccgggctcg ccggcgccgc cctcggagag cacggcggag
     4981 ccgttcggat tgccgacgac ggtcgggccg ctcgagcctt tgttgaggtc gaacgtgtcc
     5041 gtcgcgttgc cgttttttgg ttgcgagctc gagggcaaac tcgcgttcgg atcgggcagg
     5101 cgcggtccaa tcaggatgcc gccgagaccg ttattcgtga cgatggtcgg cggctgcgcc
     5161 ggggcggacg gcgcctgagc gggcgcttgg ctcggcgcgt tcggatccgt ggggccgggc
     5221 gcctgcgcga gcgccgcccc cgtgccgagc acgacggaag cgacgacgga cggaaggacg
     5281 agccgcatga tcacttcgac ggcgtggcgt cggccttacg cgtctttccg ctgtccgact
     5341 tgctcgtctt ggcagacggc ggcggtgtcg cccccgaaaa catgcgggtt tcgacgctgg
     5401 tcccttcacc acgaatcaag acgcgagggc cgctgtcgtc ctgaagcggc tgagcgcctg
     5461 cctcggaagc gtcatcggcg gcattttcct cgccaggttc catccgcact attttgagct
     5521 ttggcctgac aatcgccggc acgttgctcg ccacgcgctc ttcgttcgcg cgcggcgcgg
     5581 cggcctggcg ggcttccatc gcgtcgagac gctccgccat gcggtccgtc tcgctctgca
     5641 tgtggcggac gtcgtccttc agcttcgcca gctgcttttc gacgtgatcc ttgtcggcgg
     5701 cgcagcccac ggcaaaaagt acgaatgaag gcaaaatccg acggccaaac gccgaaaacc
     5761 aggcggagcg catggcgaaa gggtaggccc gcgcgccacg gccggccaat aaatgggcag
     5821 cgtccgctcg ctggccttgc cacgagggcc ggtttacgct cgctccgtgg gaccgcgccg
     5881 tacgcgccgc cagccgaacc gaccgcgacc gaaagtcgat ctgcggaaga cgctgttcgt
     5941 cctgccgaac ctgatcacgc tcggcagcgt cttctgcggc ttcaacgcga ttcgcttggt
     6001 ggcgctcgag cggccgaccg acgacgacgt gtaccgggcg gcggtgctgc tcattttcgc
     6061 gatgctgttc gacttgatgg acggccgcgt ggcgcgcatg accaagacgc agagcgcgtt
     6121 cgggctccag
//
LOCUS       DATIML010001007         4217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3103827, whole genome shotgun sequence.
ACCESSION   DATIML010001007 DATIML010000000
VERSION     DATIML010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4217
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3103827"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VLJ38_17400"
     CDS             complement(<1..491)
                     /locus_tag="VLJ38_17400"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU41359.1"
                     /translation="MTRDPGTPQRSERERIRHVEALRFEGSAAVPELLAELVQPSWSV
                     RRAVVAVLAAGERETALRLCEALRTGRDNEARVAGIVDALSSSKADVEDVLIELTRDA
                     NPAVVCDAAQILGRHESKRALPALAALSEHPDDNVALAAVEALGRIGGKEAVESLLKL
                     AASR"
     gene            complement(488..3001)
                     /locus_tag="VLJ38_17405"
     CDS             complement(488..3001)
                     /locus_tag="VLJ38_17405"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSU41360.1"
                     /translation="MNPTPSPPTKTSADPRSRAERAAHSLRATAADAKALEESAVRLT
                     SVGNDSAALGQQLTAAVESIAASAEQTSVTTAKIAKSQAASIELTQNVLGGIEESATA
                     LREVAASVGGVKKDTALLAEAAENTAAAIEESVRSIRVVAANAQDLAASSEQLMASGA
                     EMAAGIVGIAARADSSAAALIEVGATSEEMARGIERLTSDARDVSTRVASVSTNTAGI
                     AKGVVEIAERGKELGVSVANTASTAERMSRAAGVAADSAKQLETATNQNASTVAEVAA
                     SVEEVAATSEKNARVVDDNATSVEELARSAQSVSRAAEDIARLADATATGATQVDGST
                     RRIARLCEQARGVGDRVVNTAREGGGAVAKSIEGLAKIKVSIGSSAAVMKEMAQRADE
                     IGEFVQTINLIADRTNLLSLNASIEAARAGEHGRGFAVVAEEIRSLADRAATASSDIA
                     KIIRALQTIAREALTATMEGERVASDGASLAAAAERALAEIVTGVQDVGQSVREVAQS
                     ADEQVAAVQSLTQSSNTFRTQANLIVEAASEQAKATQDIVRGANEMRQMAKQTNQAAV
                     EQARALRDLVRSNERLTQNAQAVATTATEQAAGATGLAQTAVQMRGLTDTTLNALNEQ
                     TNLVRNIAGQTEEVRSAIDRTLVGLTEQSKGALEIARALDNVRKEAQQTSKALAEQSK
                     AGKDLEAASRAVATLAGSVTRATNEQTKAAAEIAKNAEEVRRISRQTARALDEQSGVL
                     SSLAEGAAHQSASIGAARKASAEQATSIAEISRAVDDMRARIREIVGVTGTQARGAQS
                     LSRELEELSGRIGTIRAANVEQAALVEGLVASLDDGLTP"
     gene            complement(2943..3425)
                     /locus_tag="VLJ38_17410"
     CDS             complement(2943..3425)
                     /locus_tag="VLJ38_17410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSU41361.1"
                     /translation="MKLHVVFVVAGVEYALPITFVLQMESFTGATPVPGSRPYVLGVV
                     TLRGRVIPVLDLRRRFGLPAVAPTLDTRIIVTQLAGRVVAFCVDRAREVILLDPDQLQ
                     PAPELVSERSVGLVSGTYTVGPRLLLLLDLPRISENAHDHEPHALPADEDQRRPALPG
                     "
     gene            complement(3422..>4217)
                     /locus_tag="VLJ38_17415"
     CDS             complement(3422..>4217)
                     /locus_tag="VLJ38_17415"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSU41362.1"
                     /translation="VRRKKPEEGLLRIACRAHSNTRLELTLSDDGRGIDRQAVARKAG
                     KPVPESDAALLELLCMPGLSTRDVATTTSGRGMGMEIVKRVVIDELGGELELATEVGS
                     GTTFTLRVPLTISIVDAFAFECAGQRFVVPVSTVDEIVEVDVADAVAVPTNADGKPSL
                     DIILRRGHAVPVVRLASVFRMTHEPGAGQKAIIVRRAGLPIAFAVDRMLGQQEVVIRP
                     MNDALVRVPGVSGATDLGDGRPTLVLDLVALGTSLGAGASARSALT"
BASE COUNT          559 a         1444 c         1477 g          737 t
ORIGIN      
        1 cgactggcgg ccagcttgag cagcgattcc accgcctcct tgccgccgat acgtccgagc
       61 gcctcgaccg cggcgagggc gacgttgtcg tccggatgct cgctgagcgc cgcgagcgcc
      121 ggtagcgcgc gcttgctctc gtggcgcccg agtatttgcg cggcgtcgca cacgactgca
      181 gggttcgcgt cgcgcgtgag ctcgatcagc acgtcctcga catcggcctt cgagctcgac
      241 agcgcgtcga cgatgccggc gacccgggcc tcattgtcgc ggccggtgcg aagcgcctcg
      301 cacagacgca gcgccgtctc gcgctcgccc gcggcaagca ccgcgacgac ggcccgccgc
      361 acggaccacg acggctgcac gagctcggcg agcagctccg gcacggcggc actgccctcg
      421 aaccggagcg cctcgacgtg acgaatacgt tcacgttcgc tgcgctgggg agttccggga
      481 tcgcgggtca tggggtgagg ccgtcgtcga gtgaagcgac gaggccctcc accagcgcgg
      541 cttgctcgac gttcgctgca cgaatggtgc cgatgcggcc cgacagctcc tcgagctcgc
      601 ggctgagcga ctgggcaccg cgggcctgcg tgcccgtgac ccccacgatt tcgcggatgc
      661 gagcgcgcat gtcatcgacg gcgcggctga tttccgcgat gctcgtcgct tgctcggcgc
      721 tcgctttgcg cgcggccccg atcgaggcgc tctgatgcgc ggcgccctcg gcgagcgagc
      781 tcaagacccc gctttgttcg tcgagagcgc gcgcggtttg gcgcgagatg cgccgaacct
      841 cctcggcgtt cttggcgatt tcggccgcgg ccttggtctg ctcgttcgtc gcgcgcgtga
      901 cggagccggc gagcgtcgcc acggcccgtg acgcggcttc gagatccttg cctgctttgc
      961 tttgttccgc gagcgccttg gacgtttgct gcgcctcctt gcgcacgttg tcgagcgcgc
     1021 gcgcgatttc gagcgcaccc ttcgattgct cggtgagccc gacgagcgtg cggtcgatgg
     1081 cgcttcgcac ttcctcggtt tggcccgcga tattgcgcac gagattggtc tgctcgttca
     1141 gcgcgttcag cgtcgtatcg gtcagcccgc gcatctgaac ggccgtttgc gcgagacccg
     1201 tcgcgccggc cgcttgctcc gtggccgtcg tcgcgacggc ctgcgcgttc tgcgtcaggc
     1261 gctcgttgga acggacgaga tcgcggagcg cgcgcgcctg ctcgaccgcg gcctggttcg
     1321 tctgcttggc catctggcgc atttcgttcg cgccgcgcac gatgtcctga gtcgccttgg
     1381 cctgctcgga cgcggcctcg acgatgagat tggcctgtgt gcggaaggta ttggaagact
     1441 gcgtgagcga ttgcacggcc gcgacctgct cgtcggcgct ttgtgcgacc tcgcgtacgg
     1501 attgacctac gtcctggacg cccgtcacga tctcggcaag cgcccgttcc gcggcggccg
     1561 cgagtgaggc gccgtcgctc gcgacccgtt cgccctccat ggtggccgtc agggcttcgc
     1621 gcgcgatggt ctggagcgcg cggatgatct tcgcgatgtc ggagctggcc gtggcggcgc
     1681 ggtcggcgag cgagcggatc tcctccgcga cgacggcgaa gccgcgcccg tgctcaccgg
     1741 cgcgcgccgc ctcgatgctg gcgttcagtg agagcaggtt cgtgcggtcc gcgatcaggt
     1801 tgatcgtctg tacgaattca ccaatctcgt cggcgcgttg cgccatctcc ttcatcacgg
     1861 cggcggacga gccgatggag accttgatct tcgcgaggcc ttcgatcgac tttgccacgg
     1921 cgccgccgcc ctcgcgagcc gtgttcacga cgcggtcgcc cacgccgcgc gcttgctcgc
     1981 agaggcgtgc tatccggcgc gtcgagccgt cgacttgcgt cgcgccggta gccgtcgcgt
     2041 cggcgagacg cgcgatgtcc tcggcggcgc gcgacacgga ttgggccgag cgcgcgagct
     2101 cttcgaccga cgtcgcgttg tcgtcgacga cccgcgcgtt cttctcggaa gtggccgcca
     2161 cctcttcgac ggacgcggcg acctccgcga cggtggaagc attctgattg gtggcggtct
     2221 cgagttgctt ggcgctgtcg gcggcgacgc ccgcggcgcg cgacattcgc tctgcggtgc
     2281 tcgccgtgtt ggcgacggac acgccgagct ccttgcctcg ctccgcgatt tcgacgacgc
     2341 ccttggcgat gcccgcggtg ttcgtgctga cggacgccac gcgcgtgctc acgtcgcgcg
     2401 cgtcgctcgt gaggcgctcg atccctctgg ccatttcctc ggaagtggcg ccgacttcga
     2461 tgagcgcggc cgccgagctg tcggcgcgcg cggcgatgcc gacgataccg gccgccatct
     2521 ccgcgccact cgccatcaac tgctcgctcg aggcggccag atcctgcgcg ttcgccgcga
     2581 cgacgcggat cgagcggacg gactcctcga tggcggcggc ggtgttctcc gcggcttccg
     2641 cgagcagagc cgtgtccttc ttcacgcctc cgaccgaggc cgcgacttca cgcagcgccg
     2701 tcgccgactc ctcgatgccg ccgagcacgt tttgcgtgag ctcgatcgac gccgcctgag
     2761 atttggcgat ctttgccgtg gtgaccgagg tctgttccgc ggacgccgcg atcgattcga
     2821 cggcggcagt cagctgttgg ccgagtgctg cactgtcgtt accgaccgag gtgagacgga
     2881 ccgccgactc ttcgagcgct ttggcgtccg cggccgtcgc ccggagcgaa tgagcggctc
     2941 gctcagcccg ggagcgcggg tcggcgctgg tcttcgtcgg cggggagggc gtggggttca
     3001 tggtcatggg cgttttcact gattctcggc aagtcgagca gtaagagcag gcgtgggccg
     3061 acggtgtacg tgccgcttac gagacccacg ctgcgctcgc tcacgagctc tggagccggc
     3121 tgcagttggt cggggtcgag caggatcact tcgcgcgcgc ggtcgacgca aaaagccacg
     3181 acgcgaccgg cgagctgggt cacgatgatg cgcgtgtcga gcgtcggagc aacggcgggt
     3241 aagccgaagc ggcggcgcaa atcgaggacg ggaatcacgc ggccgcgcaa cgtgacgaca
     3301 ccgagcacgt acgggcgcga gccggggacc ggtgttgcgc ccgtgaacga ctccatttgg
     3361 aggacgaaag tgatcggcag cgcgtactcc acgcccgcaa ccacgaagac gacgtgaagc
     3421 ttcacgtgag cgcgctccga gcggaagctc ccgcaccgag gctcgtgccg agcgcgacga
     3481 gatcgagcac gagcgtcggc cggccgtcgc ccagatcggt cgctcccgac acgcccggaa
     3541 cgcggacgag cgcgtcgttc atggggcgga tcacgacctc ttgctggccg agcatccgat
     3601 cgaccgcgaa ggcgatgggg agccctgcgc ggcgcacgat gatggccttc tgtccggccc
     3661 cgggttcgtg cgtcatccgg aacacgctcg cgagcctcac gacgggcacc gcgtgcccgc
     3721 ggcgcaggat gatgtcgagg ctcggcttac cgtcggcgtt cgtcggaacg gcaaccgcat
     3781 cggcgacgtc gacctccacg atttcgtcga cggtggagac cggcacgacg aagcgctgcc
     3841 ccgcgcattc gaaggcgaag gcgtcgacga tcgagatcgt gagcggcacg cgcagcgtga
     3901 acgtcgtgcc ggagcctact tccgtggcga gctcgagctc accaccgagc tcgtcgatga
     3961 cgacgcgctt gacgatttcc atgcccatgc cgcggccgct cgtcgtggtc gccacgtccc
     4021 gcgtcgacag gcccggcatg cacaagagct cgagcagcgc cgcgtcgctt tcgggcacgg
     4081 gtttgcctgc cttgcgcgcg accgcctgac gatcgatgcc gcgcccgtcg tcgctgagcg
     4141 tgagctcgag tcgcgtattg gagtgggcgc ggcaagcgat gcgcagcagg ccttcttcgg
     4201 gctttttgcg gcgtacg
//
LOCUS       DATIML010001008         5683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1662384, whole genome shotgun sequence.
ACCESSION   DATIML010001008 DATIML010000000
VERSION     DATIML010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5683
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1662384"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..864)
                     /locus_tag="VLJ38_17420"
     CDS             complement(<1..864)
                     /locus_tag="VLJ38_17420"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSU41363.1"
                     /translation="MSKLNERLSRWVFGAPKDAREPGAFHKMSLVAFLAWVGLGADGL
                     SSSAYGPEETFRQLGEHRGLAVFLAVLMLGTVVIISYGYSRIIEQFPAGGGGYLVASK
                     VLGGPAGVVAGSALLVDYVLTITISIAAGADAIFSFVPANLHWLSLPVSFAGVLLLTV
                     MNLRGVKESVTSIAPVFALFIVTHAILLIVAIGGHVPAFSHVTRQVQGNIGQTVGLLG
                     MAGTVKLVMHAYSLGGGTYTGIEAVSNGIGIMREPRVDTAKRTMLLMASSLAITASGL
                     LLAYLLWDVHPV"
     gene            complement(1051..2124)
                     /locus_tag="VLJ38_17425"
     CDS             complement(1051..2124)
                     /locus_tag="VLJ38_17425"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSU41364.1"
                     /translation="MAYQPPSFVRRLRVLLLAFAVIVGLFLLADLTLTRIDAAHVGIR
                     VRLAGSARGVQDIPIVTGWVFFDPLTEQIIAFPTSVQNVIWTASAHEGRSSDESITFS
                     SQEGVNVNADIGLSFHIDPSLAPHLYLRFRQPDLLVLADGYVRNAVREAFNDVASRMA
                     VQDIYGAKKGKLVADVGTKLRDVLGKDGFLIDQITINGALRLPENVAQAINRAMEATQ
                     IAIQAENRVRQVRAEAEQAVAEAHGAAEAARQRAEGEADAVLIRARADARANEIIRLS
                     TTGAVLQYRALQRWDGKLPTYQAGDKLPLLTFDLGRVTQNDADREKKLNELLAEDKAR
                     DKTVPAPAAASASPASPTPAAPQ"
     gene            2245..2625
                     /locus_tag="VLJ38_17430"
     CDS             2245..2625
                     /locus_tag="VLJ38_17430"
                     /inference="COORDINATES: protein motif:HMM:NF022459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2845 domain-containing protein"
                     /protein_id="HSU41365.1"
                     /translation="MSERYLSVWAAGLVCALFSPRAAADSLRCGDRLASTGDSTYEVQ
                     SICGEPDAAVHRVEYRTVRIRVPAPCHDEHGCRRCDAEVERTVEVVVDDWTYDFGRNR
                     FVEYVGFENGRLVSIREGSYGHKD"
     gene            2729..3025
                     /locus_tag="VLJ38_17435"
     CDS             2729..3025
                     /locus_tag="VLJ38_17435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41366.1"
                     /translation="MGTLHELPEASDSDAAEERGASLAFDFVLFVLWAFSVARVVAAA
                     ETHEVFGAEASLAFLCMLALPFGAFRAWITRPRRVERSSANRRAASVVSFRRRA"
     gene            complement(3063..3845)
                     /locus_tag="VLJ38_17440"
     CDS             complement(3063..3845)
                     /locus_tag="VLJ38_17440"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HSU41367.1"
                     /translation="MAALDEKTLRDVLDFAVDSAQLAGAFTLGYFNASPPVELKADRT
                     PVTAADRGAEERLRQRIESAFPTHGIVGEELGVKEGSEPARWILDPIDGTFSFICGVP
                     LYAVLIGFEWEGEAVAGVIHLPALGDTIYAARGLGCRWNGRLARVSGVRELSEARLVF
                     ASSKAAESYGKGPEFARLLAAAGNDRGFCDAYGYALVATGRAEIAIDPRMALWDTAAL
                     FPVITEAGGTLTDWKGNATHTAPEAVATNGHLFSSVMGALRG"
     gene            3926..4879
                     /locus_tag="VLJ38_17445"
     CDS             3926..4879
                     /locus_tag="VLJ38_17445"
                     /inference="COORDINATES: protein motif:HMM:NF016377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU41368.1"
                     /translation="MIPRVAHFVWIGRKIAWIYALGVITAARRGGFERVLLHHTDVLD
                     ADASVVDLSAEPRVELVPLDALGLVEAAGGPNLADRYRELESAAARVNLLRVALLAQA
                     GGVYLDADTVTLRSFEPLMAAGGVFCGEERLVYPGSAGTGVLSRVRPAALLRTSARDV
                     MRRLPRGDRLFRRVERIYPKAVNNAVLGAEPGHPLLRALIDRALALSAEERRVRYAFG
                     THLLQALVAEWKGAGLSVLPPPVFYPLGPEISEHWFRRRPGARLEDVLAPETLLVHWY
                     ASVRTERYVAAIDRSWVAEHAGDRLFAALALRGLGETPDLT"
     gene            complement(4896..>5683)
                     /locus_tag="VLJ38_17450"
     CDS             complement(4896..>5683)
                     /locus_tag="VLJ38_17450"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU41369.1"
                     /translation="VPNVEANEARLGQVFLNLVLNAAHAIPEGRAETNQIRVATRHEA
                     GRVVVEIADTGVGMSTELLQQIFTPFFSTRPAGVGTGLGLPICRRLVEDIGGELRVAS
                     RPGKGSTFTVFVPAVDQPNDPPSPSRPFASSAHPRRGRILVIDDDPMVAAAVRRTLSQ
                     DHDIVTSNRTEQALELLRQGERFDVILCDVMMPNMTGVDFWHELERFAPEDTRRIVFL
                     TGGAFAPQARQFLESVPNLHIDKPFVPEQLRAIVRERVEGESA"
BASE COUNT          863 a         1848 c         2009 g          963 t
ORIGIN      
        1 gaccgggtgc acgtcccaca gcaaataggc gagcaagagc ccggatgccg tgatggcgag
       61 cgacgaagcc atcaagagca tggtgcgctt ggccgtgtcg acccgcggct cgcgcatgat
      121 cccgatgccg ttcgagacgg cttcgatgcc cgtgtaggtg ccgccgccga gcgagtaggc
      181 gtgcatcacg agcttcaccg tgccggccat gccgagcaga cccacggttt gaccgatgtt
      241 gccctggacc tggcgcgtga cgtggctgaa cgcgggaacg tgaccgccaa tcgccactat
      301 cagcaagatc gcgtgcgtga cgatgaacag cgcaaacacg ggcgcgatgc tcgtcacgga
      361 ttccttgacg ccgcgcaggt tcatcaccgt gagcaagagc acgcccgcga acgaaaccgg
      421 taacgagagc cagtgcagat tcgccggcac gaagctgaaa atcgcgtccg cgcccgccgc
      481 gatcgaaatc gtgatcgtga gcacgtaatc cacgagcaag gccgacccgg cgaccacgcc
      541 tgcgggcccg ccgagcacct tgctcgccac gagataacca ccgccgcccg cgggaaattg
      601 ctcgatgatg cggctatagc cgtaactgat gatgacgacg gtgcccagca tcaggaccgc
      661 gagaaacacc gcgagcccgc ggtgctcgcc gagctgccgg aaagtctctt ctggaccata
      721 ggcgctcgag gacagcccgt cggcgccgag cccgacccag gcgaggaagg cgacgagcga
      781 catcttgtga aaggcgcccg gttcgcgcgc gtctttgggc gcgccgaaga cccagcgcga
      841 taagcgttcg ttgagcttgg acaatgggac ggagcgttca cgcgcggccc gtccacgagt
      901 gggcggagcg ccggcgcgac gtgcttcgtc cttgctgcgt atgaccgcgt tcgttagcga
      961 cgcgtcaagg tgcgcgctcg gcgtatcaag aaataatcaa gctcaactcg atgtgccgca
     1021 ttgtttcggg atttggccgg caaagtgccg ttactgtggc gcggctgggg tcggggacgc
     1081 cggggacgcc gatgcggcgg ccggtgccgg cacggtcttg tcccgcgcct tgtcttcggc
     1141 gaggagctcg ttgagcttct tctcgcggtc ggcgtcgttt tgcgtgacgc gcccgagatc
     1201 gaacgtcaaa agcggcaatt tgtcgcccgc ttggtacgtc ggcagcttcc cgtcccagcg
     1261 ctggagcgcg cggtactgga gcacggcgcc ggtggtcgag agccgaatga tttcgttggc
     1321 gcgcgcgtcg gcgcgggcgc gaatgaggac ggcgtcggct tcgccttcgg cgcgctggcg
     1381 ggcggcttcg gccgcgccgt gtgcttcggc caccgcttgt tcggcttcgg cgcgcacttg
     1441 ccgcacgcgg ttttcggctt gaatcgcgat ctgggtggct tccatcgcgc ggttgatcgc
     1501 ctgagctacg ttttccggca gccggagcgc gccattgatc gtgatctggt cgatgaggaa
     1561 gccgtccttg ccgaggacgt cgcggagctt cgtgcccacg tcggcgacga gcttgccttt
     1621 cttcgcaccg tagatgtcct gcacggccat gcgtgaggcc acgtcgttga acgcctcgcg
     1681 cacggcgtta cgcacgtagc cgtcggcgag cacgagcagg tccggctggc ggaagcgcaa
     1741 gtagaggtgg ggggcgagcg agggatcgat gtggaaggac aagccgatgt cggcgttgac
     1801 gttcacgcct tcttgcgaag aaaaggtgat ggattcgtcg ctcgagcggc cctcgtgggc
     1861 cgaggcggtc cagatcacgt tttgaacgct cgtcggaaac gcgatgatct gctcggtcag
     1921 cggatcgaaa aacacccagc cggtcacgat gggaatgtcc tgcacaccgc gggcgctccc
     1981 cgcgagcctc acgcggatac cgacgtgagc cgcgtcgatg cgcgtgagcg tcaggtcggc
     2041 gagcaagaag agcccgacga ttacggcgaa ggcgagcagc aggacccgca ggcggcggac
     2101 gaagctcggc ggttggtagg ccatggcgcc cgtataggca ccgtgccccg gcgtgtccat
     2161 ccggcgtgag ctgattctgg cgctttgggc gtcaatacat cgagttcagc aatgcgcgcg
     2221 gcgcggccgc gccgcggagg atccatgtcc gagcggtacc tgagcgtttg ggcggcgggg
     2281 ctcgtttgcg ctttattttc gccccgagct gcggcggaca gtctccgttg cggcgaccgg
     2341 ctcgcctcga cgggcgactc gacttacgag gtgcagtcga tctgtggcga gccggacgcg
     2401 gccgtgcacc gcgtggaata tcgaacggtg cgcatccggg tgcccgcgcc gtgccacgac
     2461 gagcacggct gccggcgctg tgacgccgag gtcgagcgca ccgtcgaggt cgtcgtcgac
     2521 gactggacgt acgacttcgg gcgcaatcgt ttcgtcgagt acgtgggatt cgagaacggc
     2581 cggctcgtct cgattcgtga ggggagctac gggcacaagg attgacgcgc acgacgcgat
     2641 gcgcgctctg ctcctcgttg gcagcatctt gacggtggtc cgccgcgcct tgaccgcttc
     2701 ttgatccggc ggcgctcatg ctctcggcat gggcaccctg cacgagctcc ccgaagcgag
     2761 cgacagcgac gcggctgagg agcgcggggc gagcctggcg ttcgatttcg tgttgttcgt
     2821 gctgtgggcg ttcagcgtcg cgcgcgtggt cgccgcggcg gagacgcacg aggtcttcgg
     2881 ggccgaggcg agccttgcgt ttctttgcat gctcgcgctg ccgttcggcg cgttccgagc
     2941 ctggatcacg cgaccccggc gggtcgagcg ctcgtcagcg aaccgccgag cggcgagcgt
     3001 cgtctctttt cgccggcggg cgtagcgcgg gccgcggcgg ttcggctgga cgagtcgcgg
     3061 gctcaaccgc gcagggcgcc catcaccgac gagaacaggt gtccgttggt cgcgacggcc
     3121 tcgggcgccg tgtgcgtcgc gttgcctttc caatcggtga gcgtgccgcc cgcttccgtg
     3181 atcacgggga agagcgcggc ggtatcccag agcgccatgc gcggatcgat ggcgatctcg
     3241 gcgcggccgg tcgcgacgag cgcatagccg taagcgtcgc agaagccgcg gtcgttgccg
     3301 gctgccgcga gcaagcgcgc aaattcgggg cccttgccgt agctttcggc ggctttgctg
     3361 ctcgcgaaca ctaggcgagc ttcggagagc tcacggaccc cggagacgcg cgcgagccgg
     3421 ccgttccagc gacagccgag gccgcgtgcc gcgtagatcg tgtcaccgag cgccggcagg
     3481 tgaatcacac cggcgacggc ttctccctcc cactcgaagc cgatcaggac ggcgtagagc
     3541 ggcacgccgc aaatgaacga aaacgtcccg tcgatgggat cgaggatcca gcgcgcaggc
     3601 tcgctccctt ctttcacgcc gagctcctcg ccgacgatgc cgtgcgtggg gaaggcgctc
     3661 tcgatgcgct ggcgcaagcg ttcctccgcg ccgcgatcgg cggccgtcac gggcgtgcgg
     3721 tcggccttca gctcgacggg cgggctcgcg ttgaagtagc cgagcgtgaa cgcgcccgcg
     3781 agctgcgccg agtcgaccgc gaaatcgagc acgtcgcgga gggttttttc gtcgagtgcc
     3841 gccatcgccc gggagcgtac accaagcttt cgagctgccg cgattgctac ttttcgcccg
     3901 agggggtaac gaagagcccg tcgctttgat cccgcgcgtc gcgcatttcg tctggattgg
     3961 acgcaagatc gcgtggatct acgcgctcgg cgtgatcacg gcggcgcgcc gcggcggttt
     4021 cgagcgcgtg ctcttgcacc acacggacgt gctcgatgcc gacgcgagcg tcgtcgacct
     4081 ttcggccgag ccgcgcgtcg agctcgtgcc gctcgacgcg ctcgggctcg tggaggcggc
     4141 gggcggtccg aacctggccg atcgttaccg tgagctcgag tcggcggcgg cccgggtcaa
     4201 cctgctccgc gtcgcgctcc tcgcgcaagc aggcggcgtc tacctcgacg ccgacaccgt
     4261 cacactccga agcttcgagc cgctcatggc cgcgggcggc gttttctgcg gtgaggagcg
     4321 cctcgtctat cctggcagcg cgggtacggg cgtcttgtcg cgtgtgcgtc cggcggcgct
     4381 cctacgcacg agtgcgcgcg acgtgatgcg ccggctaccg cgcggggatc gcctgtttcg
     4441 ccgcgtcgag cgcatttacc cgaaggcggt caacaacgcc gtactcggcg ccgagcccgg
     4501 ccatccgttg ctgcgcgcgc tcatcgaccg cgcgctcgct ctttcggccg aggagcgccg
     4561 cgtgcgctac gcgttcggaa cgcacctctt gcaagcgctc gtggcggagt ggaagggcgc
     4621 cgggctttcc gtgctgccgc cccccgtctt ctacccgctc ggtcccgaaa tcagcgagca
     4681 ttggtttcga cgccggccag gcgcgcggct cgaggacgtg ctcgcgcccg agacgctgct
     4741 cgtgcactgg tacgcctccg tgcgcacgga acgctacgtc gcggccatcg atcggagttg
     4801 ggtagccgag cacgcgggcg accgcttgtt cgcggcgctc gccctgcggg ggctcggcga
     4861 gacacccgac ctgacgtgac cgctcgacgc gagtgtcacg cgctctcgcc ttcgactcgc
     4921 tcgcgcacga tggcgcggag ctgctcgggc acgaacggct tgtcgatgtg caggttcggc
     4981 acgctctcga ggaattgccg cgcctggggc gcgaacgctc cgcccgtgag aaacacgatg
     5041 cggcgggtgt cttcgggcgc gaaccgctcg agctcgtgcc aaaaatcgac gcccgtcatg
     5101 ttgggcatca tcacgtcgca caagatgacg tcgaaacgct caccctggcg caagagctcg
     5161 agcgcctgct cggtgcggtt gctcgtcacg atgtcgtgat cctggctgag cgtgcggcgc
     5221 acggccgccg cgaccatggg atcgtcgtcg atcacgagga tgcgcccgcg tcgcgggtgg
     5281 gccgaggacg cgaacggcct gctcggtgag ggcgggtcgt tcggctggtc caccgcgggc
     5341 acgaacactg tgaaggtcga gccctttccg ggtcggctcg cgacgcggag ctcgccgccg
     5401 atgtcctcca cgagccgccg gcaaatcggg agcccgagcc cggtgccgac gccggccgga
     5461 cgcgtgctga agaacggcgt aaaaatttgc tgcaagagct cggtcgacat gccgacgccg
     5521 gtgtcggcga tctcgacgac gacgcgcccg gcttcgtgcc gcgtcgcgac gcggatttgg
     5581 ttggtttcgg cgcgaccttc ggggatggcg tgcgcggcgt tgagcacgag gttcaaaaaa
     5641 acctgaccga gccgcgcctc gttcgcctcg acattgggca cgt
//
LOCUS       DATIML010001009         1714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1662396, whole genome shotgun sequence.
ACCESSION   DATIML010001009 DATIML010000000
VERSION     DATIML010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1662396"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..166)
                     /locus_tag="VLJ38_17455"
     CDS             complement(<1..166)
                     /locus_tag="VLJ38_17455"
                     /inference="COORDINATES: protein motif:HMM:NF014474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HSU41370.1"
                     /translation="MLPVAALVGRPNVGKSTLFNRLTKTRNALVADFPGLTRDRHYGR
                     ARAGERELLVV"
     gene            complement(356..898)
                     /locus_tag="VLJ38_17460"
     CDS             complement(356..898)
                     /locus_tag="VLJ38_17460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41371.1"
                     /translation="MTRHESPLARLAIIVRDICQLRRGPEEMPYSKRLLVVLIGAGIA
                     LDVLSERVLGGHDALARSLVSTTLVLALCWIALAMRRFTNRYVQTASALVACSIVFSL
                     LVLPLALFAGPMPSDATLTPLQTLIVWATFAIFVWSVLVDAHIIRRALDAPFGLGVAL
                     ALAWTIADWALGHALFDAAQ"
     gene            complement(981..1559)
                     /locus_tag="VLJ38_17465"
     CDS             complement(981..1559)
                     /locus_tag="VLJ38_17465"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: protein motif:HMM:NF001381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HSU41372.1"
                     /translation="MRLVLLGAPGSGKGTQAAMLKAELKVPHISTGDLLRAAVKAGTP
                     LGREAKAVMEAGKLVSDEIVLGMLEERISEPDAKSGFILDGYPRNVAQCKALETLLAR
                     IGQPLDIAVKLKVPSELIVERIAGRAAAEGRKDDTPETVRERLRVYAEQTAPVAEHFG
                     ALGKLRIVDGVGDVAAVFKRILAALPGELAGA"
BASE COUNT          273 a          552 c          618 g          271 t
ORIGIN      
        1 ccacgacgag aagctcgcgc tcgccggccc gcgctcgtcc gtaatggcga tcgcgcgtca
       61 ggcccgggaa atcggcgacg agggcgttgc gcgtcttcgt caaccggttg aagagcgtcg
      121 atttgccgac gttggggcgc ccgacgaggg cggctacggg gagcatggtg ggtccagatt
      181 acttgatcgc cgtggttggc gatcgatatg gcgcgactct agatgacgac gcgccgtttc
      241 ccctctcccg cttgcgggag agggctgggg tgaggggaag tctgcggaag cgtttcgcga
      301 gcttgccctc accctaccct ctcccgcgcg cgggagaggg gaaaagaagg cgatgtcatt
      361 gggccgcatc gaacagcgcg tgcccgagcg cccagtccgc gatcgtccac gcgagcgcga
      421 gcgcgacgcc gagaccgaac ggcgcatcga gcgcgcggcg gatgatgtgc gcgtcgacga
      481 ggacgctcca tacgaagatc gcgaacgtcg cccagacgat gagtgtctgc agcggcgtca
      541 gcgtcgcgtc gcttggcatt gggcctgcga agagcgcgag cggcagcacg agcagcgaga
      601 acacgatgct gcaagcgacg agggcgctcg cggtctgcac gtaccggttg gtgaacctcc
      661 gcatcgcgag cgcgatccag cagagcgcca gcaccagcgt cgtcgagacg agcgagcgcg
      721 cgagcgcatc gtggccgccg agcacgcgct cggagagaac atcgagcgcg atgcccgcgc
      781 cgatcagcac gacgaggagc cgcttcgaat acggcatttc ctccggcccg cggcggagct
      841 gacagatgtc gcgcacgatg atcgcgagcc gggcgagtgg ggattcgtgt cgggtcatgt
      901 cgtcaccgcg ccgccgcatg gcggacgggt ccgcgctgtc ttctggaggg cgcgggcgcg
      961 gcgttacggc cggatcgcgc tcaggcaccg gcgagctcgc ccgggagtgc ggcgaggatc
     1021 cgtttgaaca ctgccgcgac gtcgccgacg ccgtcgacga tgcgaagctt gccgagcgcg
     1081 ccgaaatgct cggcgacggg cgcggtctgc tccgcgtaga cgcgaaggcg ttcgcgcacc
     1141 gtttcgggcg tgtcgtcctt gcggccttcg gccgcggcgc ggcccgcaat gcgctcgacg
     1201 atcagctcgc tcggcacctt gagcttcacg gcgatgtcga gcggctggcc gatgcgcgcg
     1261 agcagcgttt cgagcgcctt gcattgcgcg acgttgcgcg ggtagccgtc gaggatgaag
     1321 cccgacttgg catccggctc gctgatgcgc tcttcgagca tgccgagcac gatctcgtcg
     1381 gagacgagct tgccggcttc catgacggct ttcgcctccc ggccgagcgg cgtgccggct
     1441 ttgaccgccg cgcgcaggag atcgccggtc gagatgtgcg gcaccttgag ctcggccttc
     1501 agcatcgcgg cctgggtgcc cttgcccgag ccgggtgcgc cgagtaagac gagtcgcatg
     1561 tggctccaat gcggccgacg cgccgctgag gctagacttg caatcctttc acgcaacgct
     1621 agcggctggc cggaaacgtg tcaaacggcc tcattcggag aactcatggc taagggcaat
     1681 ctgctttacg cgcagtccgg cggtgtcacc gccg
//
LOCUS       DATIML010001010         2491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_214719, whole genome shotgun sequence.
ACCESSION   DATIML010001010 DATIML010000000
VERSION     DATIML010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214719"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1547
                     /locus_tag="VLJ38_17470"
     CDS             <1..1547
                     /locus_tag="VLJ38_17470"
                     /inference="COORDINATES: protein motif:HMM:NF016845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HSU41373.1"
                     /translation="VAFSLANAITSAGITGLTAAASPGSTASGGYVLVSSTTTDETSS
                     VEITSGPNDAARALKLGAQNGGREFDLAGEWRPAETGSTSADLQAFLDAGTPIPAASV
                     TLAVIDETNPAAPVTVLSKAGAFPGGPIANLLTLVRSALAADPDLAGISVELVGGSHL
                     RALPSPAEPAGRPAAANLTLSLNVGATELLPNQNVRQYWLGVGPQFGGQTTPSPGADG
                     SPSLQATDYVGAAIDALRKVDLFNLLSIPDTTAMTDASARAVIAGAQAFCEERRAFLL
                     VDPSPMARSVSDIETWASALDSNKNSAVFFPRIAVADPLRGMRVREIPASGALAGVFA
                     RTDTDRGVWKAPAGTSAVIRGVQALAAQLTDAENGQLNPLGINCLRSFPFIGSVVWGT
                     RTLQGSDALASEWKYVPVRRTALFIEESLFRGTKWVVFEPNDEPLWAQIRVAVGSFMN
                     SLFRQGAFQGKTPREAYLVKCDGETTTQDDVDRGIVNILVGFAPLKPAEFVILQIKQL
                     AGQLSA"
     gene            1563..2084
                     /locus_tag="VLJ38_17475"
     CDS             1563..2084
                     /locus_tag="VLJ38_17475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HSU41374.1"
                     /translation="MASLVAQPNRFDPYKNFKFRLAFAGQPGYVAGISKISALKRTTE
                     VVEHRDGGDPSTGRKSPGRTKFEAVSLDRGVTLDRTFEQWATKVWNFAGAPGAESSLA
                     DFRRDLVLDVFNEAGQKVLSYTIFRCWVSEYQALPDLDANANAVAIEHLKVENEGWER
                     TDYMPPPEPVIEP"
     gene            2091..>2491
                     /locus_tag="VLJ38_17480"
     CDS             2091..>2491
                     /locus_tag="VLJ38_17480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41375.1"
                     /translation="MQRLDVSLPCGLERRGRFLRTARLRPVSGADEVALADAPAFAAA
                     RVSALLARCVERIGDERPSLADVRDLLVGDREALLLHLRRLTFGEELTCVLTCPRAGC
                     GEVLELPLTVGALLVPPVAAPRALHDTELEGV"
BASE COUNT          387 a          868 c          823 g          413 t
ORIGIN      
        1 acgtcgcgtt ctcgctcgcg aacgccatca cgagcgccgg catcacaggg ctcactgcgg
       61 ccgcgagtcc gggcagcacc gccagcggcg gctacgtcct cgtcagctcc acgaccacgg
      121 acgaaacttc gagcgtcgaa atcacttctg gaccgaacga tgccgcgcgc gccctcaagc
      181 tcggcgctca gaacggcgga cgcgagttcg atttggcggg cgaatggcga ccggccgaga
      241 cggggtcgac atcggccgat ctccaagcgt tcctcgacgc gggcacgccc attcccgccg
      301 ccagcgtgac gctcgccgtg atcgacgaga cgaacccggc ggctccggtc accgtgctgt
      361 cgaaggcggg agcctttccg ggggggccta tcgccaacct tttgaccttg gtgcgtagcg
      421 ctctcgccgc ggatcccgat ttggccggca tcagcgtcga gctcgtcggc gggtcgcatt
      481 tgcgcgcgct gccgagcccg gctgagccgg cgggcagacc ggccgccgcg aacctcacgc
      541 tgtcgctcaa cgtcggcgcg accgagctct taccgaacca gaacgtgcgc cagtactggc
      601 tcggcgttgg cccccagttc ggcggccaga cgacgccctc ccccggcgcg gacggtagtc
      661 catccctgca ggcgaccgac tacgttggcg cggcgatcga cgcgcttcgc aaggtcgacc
      721 ttttcaactt gctctcgatt ccggacacca cggcgatgac ggacgcatcc gctcgagccg
      781 tcatcgccgg ggcgcaagcg ttttgcgagg agcggcgcgc cttcctcttg gtcgatccgt
      841 cgccgatggc gcgcagcgtg agcgacatcg agacttgggc gagcgcgctc gactcgaaca
      901 agaactccgc cgtgttcttt ccgcgcatcg ccgtggccga tccgctgcgc ggcatgcgcg
      961 tgcgcgaaat tcccgcgtcg ggagcgctcg caggcgtgtt tgcgcgtacg gataccgacc
     1021 gtggggtctg gaaagcgccc gccggcacgt cggccgtgat ccgcggcgtg caggcgctcg
     1081 ccgcccagtt gaccgacgcc gaaaatgggc agctcaaccc gctcggcatc aattgtctac
     1141 gcagcttccc cttcatcggc agcgtcgtgt ggggaactcg cacgctccag ggctccgacg
     1201 cgcttgcctc cgagtggaaa tacgtgccgg tccgccgcac cgccttgttc atcgaagagt
     1261 cgttgtttcg tggaaccaag tgggtcgtgt tcgagccgaa cgacgagccg ttgtgggcgc
     1321 aaatccgcgt cgctgtcggc tcgttcatga actccttgtt ccggcaaggc gccttccaag
     1381 gcaagacgcc ccgcgaagcg tacctcgtga agtgcgacgg cgagacgacg acacaagacg
     1441 acgtcgaccg cggcatcgtc aacatcctgg tcggcttcgc gccgctcaaa cccgccgagt
     1501 tcgtgatcct gcagatcaag cagctcgccg ggcagctctc ggcctgaagg gagtagggcg
     1561 tcatggcttc actcgtcgcg caaccgaatc gcttcgatcc gtacaagaat ttcaagttcc
     1621 gtctcgcctt cgccgggcag cccggatacg tcgccggcat cagcaagatc agcgcgctca
     1681 agcgcacgac cgaggtcgtg gagcaccgcg acggcggcga tcccagcacc ggccgcaaga
     1741 gcccgggccg cacgaagttc gaggccgtgt cgctcgatcg cggcgtcacg ctcgatcgca
     1801 ccttcgagca gtgggcgacc aaggtctgga acttcgcggg cgcgcccggc gccgaatcgt
     1861 cgctcgccga cttccgccgc gacctcgtgc tcgacgtgtt caacgaagcc ggccaaaagg
     1921 tgctctccta cacgatcttt cgctgttggg tgagcgagta tcaggccttg cccgacctcg
     1981 acgccaacgc gaacgccgtc gccatcgagc atctgaaggt cgagaacgag ggctgggagc
     2041 gtaccgacta catgccgccg cccgagcccg tcatcgaacc ctgaggtgtc gtgcagcgct
     2101 tggatgtgag tctaccgtgc ggcctcgaac ggcgcgggcg ttttctgcgc acggcgcggc
     2161 tgcgtccggt ctcgggcgcc gacgaggtgg cgctcgccga cgcgcccgcc ttcgcggcgg
     2221 cgcgcgtctc ggcgttgctc gcgcgctgcg tcgagcgcat cggagacgag cgaccgagtc
     2281 tcgctgacgt gcgcgacctg ctcgtgggtg atcgtgaggc gctgctgctt cacctcaggc
     2341 gcctgacctt cggcgaagag ctgacgtgcg tgctcacgtg cccgcgcgca ggctgtggtg
     2401 aagtgctcga gctcccgctc acggtcgggg cgctgctcgt gccacccgtg gcggcgccgc
     2461 gggccctgca cgacaccgag ctcgaggggg t
//
LOCUS       DATIML010001011         5414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3391595, whole genome shotgun sequence.
ACCESSION   DATIML010001011 DATIML010000000
VERSION     DATIML010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5414
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3391595"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(483..1394)
                     /locus_tag="VLJ38_17485"
     CDS             complement(483..1394)
                     /locus_tag="VLJ38_17485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSU41376.1"
                     /translation="MRLAAVSIDLDEIHHYYAIHGLGSPERAAHLVYDRAVPRAVDFA
                     EGLGVPLTFFTVGRDLERPENAETARALLARGHELGNHSLSHHYDLTLRDRPAMEREV
                     LGGIDAIVRATGTRPSGFRAPGYLVNDELVRVLAALGVGYDSSVFPSPAYYAAKALKL
                     VALKLRGRTSRSVRGSSSMLLAPARPYRLGAPYWKRGSGLPELPIQVMPGTRLPYIGT
                     SLVLAGPDGARLMTRTLMLEPFVNLELHGIDFLGADDELEVLAPHQPDARLSRPAKVG
                     AITAAIELLRKMGFSFLRLDEAARVVS"
     gene            complement(1391..2323)
                     /gene="tsf"
                     /locus_tag="VLJ38_17490"
     CDS             complement(1391..2323)
                     /gene="tsf"
                     /locus_tag="VLJ38_17490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HSU41377.1"
                     /translation="MAEVSMQQVKELRDRTQAGLNDCRSAMVEASGDMEKAVEIILKK
                     GLAKSAKRAGAIATEGVVTALVAPDGKAGVLVEVNIQTDFAARNADFLDFASKTTQAA
                     LAAKTGADLGAEKYPGSNATVEETRQALVGKLGENITVRRWERLTVDGAGKVHAYVHL
                     GGKVGVILAARLGNQAAASKPAFEKFVDDSAMQVAAMAPLYVSASEVPADAKEKQAGI
                     FEAQLVEEGKPEKARPKIVEGKVAKWLKEVCLLEQASVIESEKTVEQLRAELSKELGA
                     EVTLARFVRFERGEGIDKPTTPDFASEVAKMAGG"
     gene            complement(2326..3219)
                     /gene="rpsB"
                     /locus_tag="VLJ38_17495"
     CDS             complement(2326..3219)
                     /gene="rpsB"
                     /locus_tag="VLJ38_17495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HSU41378.1"
                     /translation="MTELQTNAQAASPNPQFEPAAAEGRRTPRDPSQPLGVRELFEAG
                     VHFGHQTKRWNPKMRPFIYGARSGIHIVDLDQTARLFKRAFDFLSDTTSRGGSVLFVG
                     TKRQAQDIVQEEARRAGMFYVTNRWLGGTLTNFRTIKGGLDRLRTLERMREDGTHQQL
                     PKKEVVQLEKERARLEKYIGGLKGMGQLPQAVFVIDPAQEGIAVSEARKLRIPIVAIT
                     DTNCDPDLVDYVIPGNDDAIRSVRLITGAVADACVYGIARRRDQQQGNDRDGGGGGQR
                     GAMDTQVIYAPRGPRAAESES"
     gene            complement(3359..4999)
                     /locus_tag="VLJ38_17500"
     CDS             complement(3359..4999)
                     /locus_tag="VLJ38_17500"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41379.1"
                     /translation="MRQGEFKAGEVIAGTRYRVRGLLGIGGMGSVYEVEHTELGKRFV
                     LKALLRDLSQREDLVARLRNEQRALGRLEHPNIINVTDAGVTTSNVPYFVMERLDGET
                     LGARLKRTGYLPIGEALELAAAVLDGLAAAHEIGVVHRDVKPPNIFLAQGKYPKILDF
                     GVAKITDTNAITARGVAVGTPRYMSPEQASGETLDGRSDIYAVGLVLYESIVGKGPFD
                     DARDPNEMLLAHLSRQAPPLSASVGSVTRELDEALLQLLAKNPGDRPASARDAAARLR
                     SVAAPYAQARHEVAGHARTVRLNVNEPASTTRADGVAARRAWGTREGVTEDAKTLARI
                     GRSPGAQETRTTGVVPRGFTSAATEATTLEDYTATAPPIRTEILPVAEAAWPGDVETR
                     TGVPITPTDGSRTLDPVPLSSLYATTTATRRNGRWVALGAGALFVVALGIGCVLTRAF
                     APASSPPREPAAGAAANRPAATLAARTLPASTAVAAEARPRSSEDRAPTAAEPPARDV
                     ASTSRAAPPVAPPKKSPKKAKSEALSPRVPDGLPSSGL"
BASE COUNT          782 a         1875 c         1847 g          910 t
ORIGIN      
        1 agacgtgatg gccgacggcg tcggcgcgct cgtcggcgcg ctcgccctca cgctcctgcg
       61 ctgagcaccg ggcgtctgcc gcgacgtggc cgcgcctcca cgcgcgcgtg gctcgcgtgc
      121 cacgcgtcag gcgagcttcc cacccacgaa ctgcgcgaat cacggaaatt gacgccagtc
      181 gccgcctggc ccgggcgttg ctccgcattg ctcgcatgcc tagctcttcc gatccgaaag
      241 tcgtcgcgct gaccgccctg ggcctcgcct gcttcgcatt cggcttctcc gtgacggcag
      301 tcgcctaccc gagcgtctct caggcggcgg taaccagccg cgcagctctg gtcgagcagc
      361 ggacggcgcc cggcgtcgtc gcttccggcg cgagtagccg cgcaaacgcg accggccgag
      421 cgcgaggctg tcggctcggc gagtgagcgg tcacctccac gttgcgcggc aagcgccgcg
      481 cgtcagctca cgacgcgcgc cgcttcgtcg aggcgcaaga agctgaagcc catcttgcgc
      541 aagagctcga tcgccgcggt gatcgcgccg actttggctg ggcgcgacag acgcgcgtcg
      601 ggctggtgcg gcgcgagtac ttcgagctcg tcatcggcgc cgaggaaatc gatgccatgg
      661 agctccaggt tcacgaacgg ttcgagcatc agcgtgcgcg tcatcaggcg cgcgccgtcg
      721 ggacccgcga gcacgagcga agtgccgatg tacggcaagc gtgtgcccgg catgacctgg
      781 atcggcagct ccggcaggcc actgccgcgt ttccaatacg gtgcacccag ccgatacggg
      841 cgcgccggcg cgagcagcat gctcgagctc ccgcgcaccg atcgcgacgt gcgaccgcgc
      901 agcttgagcg caacgagctt cagcgccttg gcggcgtaat aggcgggact cggaaagacc
      961 gacgagtcgt aaccgacccc gagcgctgcg agcacgcgca cgagctcgtc gttcacgagg
     1021 taacccggcg cgcgaaagcc gctcggacgc gtgcccgtcg cgcgcacgat ggcgtcgatg
     1081 ccgcccagaa cctcgcgttc catcgcgggg cgatcgcgga gcgtcagatc gtagtggtgc
     1141 gaaagcgagt gattcccaag ctcgtggccg cgggcaagaa gcgcgcgggc cgtttcggcg
     1201 ttctcgggac gctcgagatc gcggcccacc gtgaaaaacg tgagcgggac gccgaggcct
     1261 tcggcaaagt ccacagcgcg cggcaccgcc cggtcgtaca ccaggtgcgc cgcgcgctcg
     1321 ggtgagccga ggccgtgaat cgcgtagtag tgatggatct cgtcgaggtc gatcgagacc
     1381 gcggcgagtc tcatcccccg gccattttcg cgacttcgct cgcaaaatcc ggggtcgtcg
     1441 gcttgtcgat gccttcgccg cgttcgaacc gcacgaagcg ggcgagcgtg acttcggcgc
     1501 cgagctcctt cgagagctca gcgcgcagct gctccaccgt cttctccgac tcgatcacgc
     1561 tcgcctgctc gagcaagcac acttccttga gccacttggc gaccttgcct tcgacgatct
     1621 tcgggcgcgc cttctccggc ttgccctcct cgacgagctg agcctcgaag atccccgcct
     1681 gcttctcctt ggcgtcggcg ggcacctccg atgccgagac gtagagcggc gccatcgccg
     1741 cgacctgcat cgccgaatcg tcgacgaact tttcgaacgc gggcttgctg gccgccgcct
     1801 ggttgccgag gcgcgcagcg aggatcaccc cgaccttgcc gccaaggtga acgtacgcgt
     1861 gcaccttgcc ggccccgtcg accgtcaagc gttcccagcg gcgcacggtg atgttttcac
     1921 cgagcttgcc gacgagcgcc tggcgcgtct cttcgaccgt cgcgttcgag cccgggtact
     1981 tttccgcgcc gaggtccgcc ccagtctttg ccgcgagcgc cgcctgcgtg gttttgctgg
     2041 cgaagtccaa gaaatcggcg tttcgcgccg cgaaatccgt ctggatgttc acttcgacga
     2101 gcacgccggc cttgccgtcc ggagcgacga gcgccgtcac gacaccttcg gtcgcgatgg
     2161 cgccggcgcg cttggcgctc ttggcgagac ccttcttcag gatgatctcg actgccttct
     2221 ccatgtcgcc gctggcctcg accatcgcgc tgcgacaatc gttgagcccc gcctgcgttc
     2281 gatcgcggag ctccttcacc tgctgcatgc ttacttcggc catcttcagc tctccgactc
     2341 ggccgcacgc gggccgcgcg gcgcgtagat cacctgggtg tccatggcgc cgcgctgtcc
     2401 accgccgccg ccgtcacggt cgttgccctg ctgctggtcg cggcggcgcg cgatgccgta
     2461 aacgcaagcg tccgccacgg cgcccgtgat gagacgcacc gagcgaatgg cgtcgtcgtt
     2521 acccggaatg acgtaatcga cgagatccgg atcgcagttc gtgtcggtga tcgcaacgat
     2581 cgggatccgc agtttgcgcg cttcgctcac ggcgatcccc tcctgcgccg gatcgatcac
     2641 gaacacggcc tgcggcagct ggcccatgcc cttcaagccg ccgatgtact tctcgagccg
     2701 cgcgcgctcc ttctcgagct gcacgacctc tttcttcggc agctgctggt gcgtgccgtc
     2761 ctcgcgcatg cgctcgagcg tccgcaggcg atcgaggccg cccttgatgg tgcgaaagtt
     2821 cgtgagcgtg ccgccgagcc agcgattggt gacgtagaac atgccggcgc gccgcgcctc
     2881 ttcctgcacg atgtcctgcg cctggcgctt ggtgccgacg aagagcacgg agccgccacg
     2941 cgaggtggtg tcggacagga agtcgaacgc gcgcttgaag aggcgcgcgg tctgatcgag
     3001 gtcgacgatg tggatgccgc tgcgcgcgcc gtaaatgaac gggcgcatct tcgggttcca
     3061 gcgcttggtc tggtgaccga agtgcacgcc ggcttcgaag agttcgcgca cgccgagcgg
     3121 ctgcgaagga tcccgcgggg tacgacgccc ttcggcggcc gcaggttcga attggggatt
     3181 tggggacgcc gcttgggcgt tggtctgtag ctcagtcatg gggcgcagtc ctttcggttg
     3241 ttcctccgcc ccgccgcggg caagccggct gccgaagcag caagcaccga acccgacgga
     3301 cgcgcaccgg ggcgtgtggt gtaccccgcg ggaaatccac gggggccggg accctacgct
     3361 acaagcccga gctcggcaac ccgtccggca cgcgcggcga gagcgcttct gatttcgcct
     3421 tcttggggga ttttttgggg ggcgcgacgg gcggcgcggc gcgggacgtg gacgccacgt
     3481 cccgcgctgg aggctcggcg gcggtagggg cccggtcttc agagcttcgc ggtcgcgctt
     3541 cggcggcgac ggcggtactc gccggcagcg ttcgagccgc cagcgtcgca gcgggtctgt
     3601 tcgccgccgc ccccgccgcg ggctcgcgcg gcggggagct cgccggcgcg aaggcccgcg
     3661 tgagcacaca accgatcccg agcgcgacga cgaacagcgc gccggcgccg agcgcgaccc
     3721 agcgcccgtt ccgccgcgtc gcggtcgtcg tcgcgtacaa gctcgagagc ggcaccggat
     3781 ccagcgtgcg cgagccgtcc gtgggtgtga tcggcacacc ggtacgcgtt tcgacgtcgc
     3841 ccggccacgc tgcctctgca acgggaagga tttccgtccg aatcggcggc gcagtagccg
     3901 tgtagtcctc gagcgtggtc gcttcggtcg cggcggacgt gaagccgcgc gggacgacac
     3961 ctgtcgtccg cgtctcctgc gccccgggcg aacgtccgat gcgggcgagc gtcttggcgt
     4021 cttcggtcac gccctcgcgc gtgccccacg cgcgacgtgc ggcgacgccg tcggcgcggg
     4081 tcgtggaggc tggttcgttc acgttgagcc gcacggtgcg cgcatggccg gcgacttcgt
     4141 gccgcgcttg cgcgtagggc gccgcgacgc tgcgcagccg cgcggcggcg tcccgcgcgc
     4201 tcgctggccg atcgccagga tttttcgcga gcagctgaag gagcgcttcg tcgagttcgc
     4261 gcgtcacgct gccgaccgac gccgacaaag gcggcgcctg gcgactcaag tgcgcgagca
     4321 acatctcgtt cgggtcgcgc gcgtcgtcga acggcccctt accgacgatg ctctcgtaga
     4381 ggaccaaacc gacggcgtag atatcggaac gcccgtcgag cgtctcgccg ctcgcctgct
     4441 cgggcgacat gtagcgcggc gtgcccacgg cgacgccacg tgccgtgatc gcgttcgtgt
     4501 cggtgatttt ggcgacgccg aagtcgagga tttttggata ttttccctgc gcgaggaaga
     4561 tattcggcgg tttgacgtcg cggtggacga cgccgatttc gtgcgcggcc gcgagcccgt
     4621 cgagcaccgc cgccgctagc tcgagggcct cgccgatcgg gaggtaaccc gtgcgtttga
     4681 gacgcgcgcc gagcgtttcg ccgtcgagcc gctccatcac gaagtagggc acgttcgacg
     4741 tcgtgacgcc ggcgtccgtc acgttgatga tattcgggtg ctcgagccgg ccgagcgcgc
     4801 gttgctcgtt gcgcaaccgc gcgaccaagt cctctcgctg cgaaagatcg cggagcagcg
     4861 ccttcagcac gaagcgctta ccgagctcgg tgtgctcgac ttcgtagacg gagcccatgc
     4921 caccaatgcc caagaggccg cgcactcgat accgagtgcc ggcaatgacc tcgcccgctt
     4981 tgaattcgcc ttgtctcacg cgccctgccg ccgcaggtcg ccgtccgccg gcgggaaact
     5041 gcggtttcgg cggaaggata tcggcggacc tgcgaggcgt cgaggcattc ggcgcctttg
     5101 cggcaataac cgggcatacg gctccgagcg cccgagtgga ctcaccgcgc ctcacgcctt
     5161 cgcatcggct cgtcgccctc gcgagttgct tcgacgagcg gcagcgcttc gcgacgagag
     5221 agcgacgctg aacggatgtt ttgcgctcgg cgcgacatcc ggcttccatc gtccgctcgg
     5281 gcggtggtag agcgacgcca tggccatcac acgcgagacg gtgctgcacg tggcacggct
     5341 cgctcggctc gagctcgagg gcgacgaggt cgagcggatg cagcgagatt tgggcaaaat
     5401 cctcggctac atgg
//
LOCUS       DATIML010001012         2528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3104748, whole genome shotgun sequence.
ACCESSION   DATIML010001012 DATIML010000000
VERSION     DATIML010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3104748"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="VLJ38_17505"
     CDS             complement(<1..898)
                     /locus_tag="VLJ38_17505"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU41380.1"
                     /translation="MPTSDASDLLGPELASALSQKGYVTLTAVQEAVLASELAGRDLR
                     ISSQTGSGKTLAIGFAVRHGVGPSEKPNDGIARPQAVVITPTRELAKQVELELRWLYA
                     PSKVSVGCVTGGSSVRDEFRMLARGVGILVGTPGRLLDHLQRGAVALGQTHALVLDEA
                     DRMLDLGFRDDLEAILALAPAGHRTHLVSATFPREVEALARRVQTDPIHIQGTPLGSA
                     NADIDHVVHLVKPAERVDALVNLLLAAPGEQVLVFTRTRAEVTEVCEELDAAGFAVDS
                     LSGEMEQNARHRALSAFKQGKIQ"
     gene            975..1424
                     /locus_tag="VLJ38_17510"
     CDS             975..1424
                     /locus_tag="VLJ38_17510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41381.1"
                     /translation="MLPRSYYGFEACSERGVSMPTLYRGNHLVIQYQHASGYVRVVRT
                     ETPFESITDVAAALDACRAALADLDLALHGILFDWRRSPISTDPNLHKALAERMDALA
                     DAFDRRAILLATPVGTMQASRVGRAMGNQKMQVFNDEDAAVKYVTYP"
     gene            complement(1437..2054)
                     /locus_tag="VLJ38_17515"
     CDS             complement(1437..2054)
                     /locus_tag="VLJ38_17515"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HSU41382.1"
                     /translation="MKIYGDPLSTNTRKVLTTLAELDLPHEFVHVDFARGEHKHAAHV
                     ERQPFGQMPALDDDGFVLYETHAMCRYLDARAGGRLLPSDLKSRALADQWMSVESANF
                     SAYAMKFVYHYLLRVEQDPDVLARAGAGLGQALAILGKELAGKPYLAGQSFTLADICY
                     MPYFEYVLLTPAREHFEKYPSALAWWSRVQDRPSWRRVVGRAAAA"
     gene            2311..>2528
                     /locus_tag="VLJ38_17520"
     CDS             2311..>2528
                     /locus_tag="VLJ38_17520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41383.1"
                     /translation="MHTASFSVTGLGLGLIIAACSSTEAPNPGSQNGNAGSRATTGGS
                     TGVGGTGGASGGGAGRSGLDTGGGTSTGG"
BASE COUNT          425 a          838 c          843 g          422 t
ORIGIN      
        1 tctggatttt gccctgcttg aaggcggaaa gcgcgcggtg ccgagcgttc tgctccattt
       61 cgcccgagag tgagtcgacg gcgaagcccg ccgcgtcgag ctcctcgcac acctcggtca
      121 cctcggcgcg cgtccgcgtg aagacgagca cctgctcgcc cggcgcggcg agcagcagat
      181 tgacgagcgc atcgacgcgc tcggccggct tcaccaggtg aacgacgtga tcgatgtcgg
      241 cgttggccga gccgagcggc gtgccctgaa tgtggatcgg atccgtctga acgcgtcggg
      301 cgagcgcctc gacctcgcgt gggaacgtcg cggacaccaa atgcgtgcga tgcccggcgg
      361 gagcgagcgc cagaatcgcc tcgaggtcgt cgcggaagcc gaggtcgagc atccggtcgg
      421 cttcgtcgag cacgagggcg tgcgtctggc cgagcgcgac ggccccgcgc tgcaaatggt
      481 cgagcaatcg cccgggtgta ccgaccagga tgccgacgcc gcgcgccagc atgcgaaact
      541 cgtcgcgcac gctcgagccg cccgtcacgc agccgacgga caccttgctc ggcgcgtaaa
      601 gccagcggag ctcgagctcc acttgcttgg cgagttcgcg cgtgggcgtg atgaccacgg
      661 cttgagggcg agcgatgcca tcgttcggct tttcgctcgg cccgaccccg tgcctcaccg
      721 cgaaaccgat ggcgagcgtc ttgcccgaac cagtctggga gctgatgcgg aggtcgcggc
      781 cggcgagctc cgaagcgagc acggcttctt ggacggccgt cagggtgacg taacccttct
      841 gggagagggc gctggcgagc tcgggtccga gaaggtcgga cgcatcggaa gttggcatcg
      901 ggggcgcccc ctatatcacc ggccgagaaa agcgcccgag ctccaccact aacgcctcga
      961 ttggcgacgt tttcgtgctc cctcggagct actatggctt cgaagcctgc tccgagcgcg
     1021 gcgtcagcat gcccaccctc tatcgcggca atcatctcgt gatccagtac cagcacgcgt
     1081 cgggctacgt gcgcgtggtc cgcaccgaga cgccattcga gtccatcacg gacgtagccg
     1141 cggcgctcga cgcgtgccgc gcggcgctcg cggacctgga cctagctctc cacggcatcc
     1201 tgttcgattg gcgccggagc cccatctcca ccgatccgaa cctgcacaag gcgctcgcgg
     1261 aacgcatgga tgcgctcgcc gacgccttcg accgccgcgc gatcctactc gcgaccccgg
     1321 tcggcacgat gcaggcgtcg cgggtcggtc gcgcgatggg taaccagaag atgcaggtct
     1381 tcaacgacga agacgcggcc gtaaaatacg tgacctaccc ttgaacgggc gtcgcctcac
     1441 gccgccgcgg cgcggccgac cactcgacgc cacgagggcc gatcctgcac gcgcgaccac
     1501 caggcaagcg cgctcggata cttctcgaaa tgctcgcgcg ccggcgtcag gagcacgtac
     1561 tcgaagtacg gcatgtaaca gatatccgcg agcgtgaagc tttggcccgc gaggtacggc
     1621 ttgccggcga gctccttgcc caagatagcg agcgcttggc cgaggcccgc ccccgcgcga
     1681 gccaagacgt ccgggtcttg ctcgactcgc aacaggtagt ggtacacgaa cttcatcgca
     1741 tacgccgaaa agttcgcgct ctcgacgctc atccattgat cggcgagcgc tcggctcttc
     1801 aaatcgctcg gcagtaagcg gccacccgcg cgggcgtcga ggtaccggca catggcgtgc
     1861 gtctcgtaga gaacgaagcc gtcgtcgtcg agcgccggca tctgtccgaa cggttggcgc
     1921 tcgacatgcg cggcgtgctt gtgctcgccc cgcgcgaagt cgacgtgcac gaactcgtgc
     1981 ggcaggtcga gctcggcgag cgtggtcaga actttgcgcg tgttcgtgct caacggatcc
     2041 ccatagattt tcatggcgtc gagtctagct ttcgctagct gctgatggcc tggctttgcc
     2101 gcgctgcgag cgcgtttttg ccggactcgc accgcgctcg tgcgcgcctg tcgcacctgt
     2161 cgcatgccgg aagacatggt gcgacgtgag cgtcaaggct gaattagtta ttcatgtggg
     2221 ctgcaatttt gaatagatgg ctggagattc ggcgctcgaa ctcgaatgga aggtgatcaa
     2281 atccgcgccc taatgggaat ttgtagccgc atgcataccg cttccttttc cgtcacgggt
     2341 ctcggcctcg ggctcatcat cgcggcctgc tccagcacgg aggcgcccaa cccaggctcg
     2401 cagaacggca acgccggctc gcgtgccacg acaggcggca gcaccggagt gggcggcacc
     2461 gggggagcga gcggtggcgg cgcgggccga tctgggttgg ataccggcgg cggcacgagc
     2521 accggcgg
//
LOCUS       DATIML010001013         1879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3683166, whole genome shotgun sequence.
ACCESSION   DATIML010001013 DATIML010000000
VERSION     DATIML010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3683166"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..841
                     /locus_tag="VLJ38_17525"
     CDS             32..841
                     /locus_tag="VLJ38_17525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU41384.1"
                     /translation="MSSDDDSDRATVGKVLSALAEPVFAALDRLGAVLLLTGQTIVWL
                     IRPPYRLTQLFLAMDFIGVKSIFIVGLTGTFSGMVLSLQTVHSLRQFGAEGVVGSIVA
                     VSLCREISPVFAALMVTARAGSAMAAELGNMRVTEQIDALTTMGVSPVQYLLSPRLLA
                     SVLMLPLLFVLYTCVGMVGAYVVAVEWLSVDPGVFTSNIEKYLAPSDLYMGVTKAFVF
                     GFLLCSISCTQGFFASGGAKGVGEATTRAVVLSSVAVLVMNYLLTSWMTDM"
     gene            965..1342
                     /locus_tag="VLJ38_17530"
     CDS             965..1342
                     /locus_tag="VLJ38_17530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41385.1"
                     /translation="MNEASGKAKHRAAPNSERRAYDNAGHLDPKRASRLLEIGAETHA
                     PTPGNAFVAGSAADDDLAEELGEGAVLAMTSGEDTVGADLNHDVEEDWGGPFVESTAN
                     KEFASGTDESNIAEATREPFPTV"
     gene            complement(1368..>1879)
                     /locus_tag="VLJ38_17535"
     CDS             complement(1368..>1879)
                     /locus_tag="VLJ38_17535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSU41386.1"
                     /translation="DFIAVAEALIARKATRADRLVIRGDSNGGLLVGAAMTERPDLFK
                     VVLCGVPLLDMLRYQLFGSGKTWIEEYGSADDAEDFRALYAYSPYHHVQAGVAYPSVL
                     LFSADSDDRVDPLHARKFAALLQARSAGGPVLLRIQEHAGHGGADKIQALVDERADAY
                     AFALSQVTR"
BASE COUNT          321 a          596 c          623 g          339 t
ORIGIN      
        1 aacggggacg taggtggtac aagcgaagga cgtgagctcc gacgacgatt cggatcgcgc
       61 gacggtcggc aaggttctgt ccgcgctggc cgagccggtc ttcgccgcgc tcgaccgcct
      121 cggcgccgtg ctgctgctca cggggcaaac catcgtttgg ctcatacgcc cgccgtaccg
      181 cctgacgcag ctctttctcg cgatggactt catcggcgtc aaatcgatct tcatcgtcgg
      241 gctcacgggc accttcagcg gcatggtctt gtcgctgcag acggtgcaca gcctgcgcca
      301 gtttggcgcc gaaggcgtcg tcggctcgat cgtcgccgtg tcgctgtgcc gtgaaatcag
      361 tccggtcttc gccgcgctca tggtcacggc gcgcgccggc agcgcgatgg cggccgagct
      421 cggcaacatg cgcgtgaccg agcagatcga cgcgctcacg accatggggg tgagccccgt
      481 tcagtacctg ctctcgccgc ggttactcgc gagcgtcttg atgttgcctc tgcttttcgt
      541 gctctatacc tgcgtcggta tggtgggtgc ttacgtcgtc gccgtcgagt ggctgagcgt
      601 cgaccccggc gtcttcacct cgaatatcga gaaatacctc gcgccgagtg acctctacat
      661 gggcgtgacc aaggcgttcg tgttcggctt cttgctctgt agcatctcgt gcacacaggg
      721 ttttttcgcc agcggcggcg ccaagggggt cggtgaagcg accacgcgcg ccgtcgtctt
      781 gagctccgtt gccgtcctcg tgatgaatta cctgctcacg agttggatga ccgacatgtg
      841 actttcgcgg caacgcgcgt gccacgcgtc acgtgcccag gctgcgaaat ctacgggcag
      901 cgtcgcgaga tgagagtagc ctgtgctgtg tggtgatggg gattgcgtgg acggagtcga
      961 caccatgaat gaagcatcag gcaaggccaa gcaccgagct gctcccaatt ccgagcgccg
     1021 agcgtacgac aacgccgggc acttggaccc gaagcgcgcg tcccgtttgc tcgagattgg
     1081 tgcggagacg catgcgccca cgccggggaa cgcgttcgtt gctgggtccg cagccgacga
     1141 cgatctcgcc gaagagctcg gcgagggcgc ggtcctcgcg atgacgagcg gcgaagacac
     1201 ggtgggcgcg gacttgaatc acgacgtcga ggaagactgg ggcggcccgt tcgtcgagtc
     1261 gaccgcgaac aaagagtttg cgagcggcac cgacgaatcg aacatcgccg aagcgacgcg
     1321 cgagccgttc cccaccgtct aacccgagcg tccgaccttc cgacgcgtca gcgcgtcact
     1381 tgagacaacg caaacgcgta cgcatccgcg cgctcatcga cgagcgcttg gattttgtcg
     1441 gcgccgccgt ggcccgcgtg ctcttggatg cggaggagca ctgggccgcc cgccgaacgc
     1501 gcctggagca gggcggcgaa tttccgagcg tggagcggat cgacgcgatc gtcactgtcg
     1561 gccgaaaata agagaacgct cgggtacgcg acgcccgctt ggacgtggtg atacggcgag
     1621 tacgcgtaga gcgcccgaaa atcctcggcg tcgtcggcgg agccgtactc ctcgatccac
     1681 gtcttgcccg agccgaacag ctggtagcgg agcatgtcga gcagcggcac gccgcagagc
     1741 accaccttga acaagtcggg gcgctctgtc attgccgcac ccacgagcaa accgccgttc
     1801 gagtcgcccc gaatcacgag ccgatcggcg cgggtcgcct ttcgtgcgat gagcgcttcg
     1861 gcgacggcga tgaagtcgt
//
LOCUS       DATIML010001014         2777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_796820, whole genome shotgun sequence.
ACCESSION   DATIML010001014 DATIML010000000
VERSION     DATIML010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796820"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2777
                     /locus_tag="VLJ38_17540"
     CDS             <1..>2777
                     /locus_tag="VLJ38_17540"
                     /inference="COORDINATES: protein motif:HMM:NF018208.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HSU41387.1"
                     /translation="HVRLRDVTELFLGTGVGTKAYSIVEQGRIGQIVSARPEDRRLFI
                     DEAAGITKYKQRRKMAERKMELTRQNLLRVTDIITEIDRNRASLKRQVAKAERFLDYR
                     RELEDLVLLDASHKLLELIVTQRVAEEGHEAARQTLADERTRLREAEAVLDAERAQSA
                     AIEASADEAARSAFDADNHVSSLQAEIERAKERLTYLDHRLMGGNLELESILAKVREL
                     SAEKEQIAVKVEELGSDERAREVDALQETEALTTLQAEEARASADVLEIRKSTGELSA
                     RTAAQGARLDGIAQRRDEGRIRRDKLATEKEHLEGEHGDAIARKQALERSVAELAEGK
                     KFTASERESLEHENEALRSRQLESERAVDVAKNELSLKRNRLRALEDLHRRLEGVGAG
                     ARTLLGKGDARVQGLVADRIDTPEELTAAVAGLLGSRLQCVVVADRDAGLELLDDLRR
                     SERGRAEVMPARPPYIAGAPAELEGPGVLGRLIDRLGYADADEPLVRSLIGDALLVST
                     AEDAVRVASSTPGVTAVALDGTVAHPDGIIAGGTGDGDASAMLEQKREMHLLTDEVAR
                     LETEAARASAEHNALRARLSEVGTALERARQFAHEGELAHVTAEKDLSRTAGDIERIE
                     ARRTTVGIELDELDRAIVAGTQAEAECRAELDAATAELAHVSQALTRAEETAASWRER
                     VAAQSALVTERRVRLAQVREQSGAARHSAQRIETSLAELEQRSAALQQELTEAAATYG
                     ETAATIMLTREARAEAAERAREVHAALERSRAELEQARQSLGTLEASLRTVRESLEQH
                     DEICRTQELTLQRIAIERQHLLATIREKFRGLELTRVVGDYHARPMPDDEQRRRIDEL
                     TQLIDRMGPVNLDARAEHEQAEKRFHELNDQKVDIDKALEELERAIRHMNKESRRMFR
                     ETFDSVNALFK"
BASE COUNT          528 a          988 c          944 g          317 t
ORIGIN      
        1 gcacgtccgc ctgcgcgacg tgaccgagct ctttctcggc accggcgtcg gcaccaaggc
       61 gtactcgatc gtcgagcagg gtcgcatcgg acagatcgtg agcgctcggc ccgaggatcg
      121 ccggctcttc atcgacgaag cggcgggcat caccaagtac aagcagcgcc gcaagatggc
      181 ggagcgcaag atggagctca cgcgccagaa cctcttgcgc gtcaccgaca tcatcaccga
      241 aatcgatcgc aaccgcgcct cgctcaagcg ccaggtcgcc aaggcggagc gtttcctcga
      301 ttaccgtcgc gagctcgagg acctcgtgct gctcgacgcg tcgcacaagc tgctcgagct
      361 gatcgtgacg cagcgagtgg ccgaggaagg ccatgaagcc gcccgccaga cgctcgccga
      421 cgagcgaacg aggctccgtg aggccgaagc cgtgctcgat gccgagcgcg cacagtccgc
      481 cgccatcgag gcgagcgccg acgaagccgc tcgctccgcg ttcgacgccg acaatcacgt
      541 gagcagcctg caggccgaga tcgagcgcgc caaggagcgc ctcacctacc tcgaccaccg
      601 cttgatgggc ggcaatctcg agctcgagag catcctcgcc aaggtccgcg agctcagcgc
      661 ggaaaaagag cagatcgccg tcaaggtgga agagctcggg agcgacgagc gtgcgcgcga
      721 agtggacgcg ctgcaggaga cggaagcgct cacgactctg caggccgaag aggcgcgcgc
      781 gagcgccgac gtgctcgaaa tcagaaagag cacgggcgag ctatctgcgc ggaccgccgc
      841 gcaaggcgca cggctcgacg gcatcgcgca gcgccgcgac gaaggtcgca tccggcgcga
      901 caagctcgcc accgaaaagg aacacctcga gggcgaacac ggcgacgcca tcgcgcgcaa
      961 gcaagcgctc gagcgctcgg tcgccgagct cgccgagggc aaaaagttca cggcctcgga
     1021 acgcgagagc ctcgagcacg aaaacgaagc gctgcgttcg cgccaactcg agagcgagcg
     1081 cgccgtggac gtcgcgaaga acgagctctc gctcaagcgt aaccgcttgc gcgcgctcga
     1141 ggatttgcat cgccgtctcg aaggcgtcgg tgcgggcgcg cgcaccttgc tcggcaaggg
     1201 cgatgcgcgc gtgcaagggc tcgtcgccga tcgtatcgac acgcccgaag agctcaccgc
     1261 ggcagttgca ggtctactcg gcagccgcct gcagtgcgtc gtcgtggccg accgcgacgc
     1321 cgggctcgag ctgctcgacg atctgcgccg cagcgaacgc ggtcgcgccg aggtcatgcc
     1381 ggctcggccg ccgtacatcg ccggtgcgcc ggccgagctc gagggcccgg gagtgctcgg
     1441 ccgcctcatc gatcggctcg gttacgccga cgccgacgag ccgctcgtcc ggagcctgat
     1501 cggcgacgca ctgctcgtga gcacggcgga agacgccgtg cgtgtcgcat cgagcacgcc
     1561 gggcgtcacg gccgtcgcgc tcgacggcac ggtcgcgcat cccgacggca tcatcgccgg
     1621 cgggaccggc gacggcgacg cgagcgcgat gctcgagcag aagcgtgaaa tgcacctgct
     1681 caccgacgag gtcgcacgcc tcgaaacgga agccgcgcgc gcgagcgccg agcacaatgc
     1741 cctgcgcgct cgcctgtccg aggtcggcac ggcgctcgaa cgcgcgcgcc aattcgccca
     1801 cgagggcgag ctcgcgcacg tcacggccga gaaggacctc tcgcgcacgg cgggcgacat
     1861 cgaacgcatc gaagcgcgcc gcacgacggt cggcatcgag ctcgacgagc tcgatcgcgc
     1921 catcgtcgcc ggcacgcagg cggaggccga gtgccgcgcc gagctcgacg ccgccacggc
     1981 ggagctcgcg cacgtgagcc aagcgctgac tcgcgccgaa gagacggcgg cgagctggcg
     2041 cgaacgcgtc gcggcgcaga gcgcgctcgt caccgaacgg cgcgtccgcc tcgcgcaggt
     2101 gcgcgagcag tcgggcgccg cgcgacactc cgcgcagcgg atcgaaacgt cgctcgccga
     2161 gctcgagcag aggagcgctg cgctccagca agagctcacg gaagccgcgg ccacgtatgg
     2221 cgagacggcc gccacgatca tgctcacgcg cgaagctcgc gccgaagccg ccgagcgcgc
     2281 gcgcgaggtg cacgccgccc tcgagcgttc gcgcgccgag ctcgaacagg cgcgccagag
     2341 cctcggaacg ctcgaagcga gcctgcgcac cgtgcgcgag agcctcgagc agcacgacga
     2401 aatctgccgc acccaggagc tcacgctcca gcgcatcgct atcgagcgcc agcacctact
     2461 cgccacgatc cgcgagaagt tccgcggcct cgagctcacg cgcgtcgtcg gcgactacca
     2521 cgcgcgcccg atgcccgacg acgagcagcg ccgccgcatc gacgagctca cccagctcat
     2581 cgaccgcatg ggtcccgtga atctggatgc gcgtgccgag cacgagcagg cagagaagcg
     2641 cttccacgag ctcaacgacc aaaaggtcga catcgacaag gcgctcgagg agctcgaacg
     2701 cgcgatccgg cacatgaaca aggaatcgcg gcgcatgttc cgcgagacgt tcgactccgt
     2761 gaacgccctg ttcaaaa
//
LOCUS       DATIML010001015         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5130845, whole genome shotgun sequence.
ACCESSION   DATIML010001015 DATIML010000000
VERSION     DATIML010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5130845"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(568..987)
                     /locus_tag="VLJ38_17545"
     CDS             complement(568..987)
                     /locus_tag="VLJ38_17545"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HSU41388.1"
                     /translation="MESPVHEYEVLIIERHLDTFGHVNNATYLELFEAARWDWITSNG
                     FGIERIRELQQGPTVVEVTLRFKREIKNRQRILIRSWALSYEGKICNVIQEMRDEANE
                     LYCDARFVCGLFDMRARRLLAPTPDWLRAIGMNPKTE"
     gene            1168..>1699
                     /locus_tag="VLJ38_17550"
     CDS             1168..>1699
                     /locus_tag="VLJ38_17550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41389.1"
                     /translation="MPFDAEQRRTAATPLRRRLLVGIALAVPIAVIGVDVFFIAKSRS
                     TATGSVARATSPGSSAVRGAAHALSSSTVAFPAADEEPTAEIQTSPEASGANEPPAED
                     GPLLDEDGATEEPAPAKPPPPQHFATVQDAVAGSCSTVSIEGLSKQIIEQARCINPKA
                     VVPLPSRPNLVTGPNVF"
BASE COUNT          288 a          584 c          555 g          272 t
ORIGIN      
        1 ctccgtccca ccaacttttg cacctcagcc gcgacgtgtg agacgcatcc gcgaacgcgc
       61 ggcgcacacg aagtctgtcg ggcacacgga ggagcagccc gcggcggccg tacacgctgc
      121 accggatgcg ctcagtgcgt cgcgcgccac gatcgaatca agcgtggagt catcgagact
      181 catggcttca cgcccgctgg actcgacgtc atcgctgctc ccgcgctgcg aggtcactcg
      241 gcactcgtga ccgcacccgc gttgctcgaa ctcgggcacg catcgcgggc ggcctacgac
      301 gttcttcggt cggcagccga gcactacgcg ctgcgtcgtc gcgacgacac gttgcgataa
      361 caccacgcgc ctgcgtacgc acacggcgcg cgcaagcggg tgcgcgcgcg tgacgaacat
      421 gacgcacgcg tcgcccgctg atgcttgcgt ccggcgacgc acgtggcgag gctcagtctc
      481 atgccttgtc cagcgcccgt gagcgcgcgg cgagcgcgtg agctcacgac gacgacgtga
      541 gctcaccgag cgaggagcac gcgagggtca ctccgttttc ggattcatgc cgatggcgcg
      601 cagccagtcc ggggtgggcg cgagcaagcg gcgcgcccgc atgtcgaaca gcccgcaaac
      661 gaagcgcgca tcgcagtaga gctcgttggc ttcgtcgcgc atctcctgga tgacgttgca
      721 gattttgcct tcgtagctca gggcccacga gcggatcagg atgcgctgcc ggttcttgat
      781 ctcacgcttg aagcgcagcg tgacctcgac gaccgtcggt ccctgctgga gctctcgaat
      841 gcgctcgatg ccgaagccgt tcgaggtgat ccaatcccaa cgtgccgcct cgaagagctc
      901 gaggtaggtg gcgttgttga cgtgaccgaa cgtatcgagg tgccgctcga tgatgaggac
      961 ttcgtactcg tgaaccggtg actccacgaa gagtctctgg ggcgcgagcc cccactccgt
     1021 caagcgccgc gcacacgccg ctgctcggcg caagcgcgac gtgaacggcg cgaaggaggg
     1081 aaccttcgag cgccgttcgg ctttctggaa cgcggttttt gcggactctt gcgcggtgcc
     1141 ggggatcgca gtaccgcccc cgatcccatg ccgttcgacg ccgaacaacg acgcacggcg
     1201 gcgacgccgt tgcggcggcg tctgctcgtc ggcatcgccc tcgccgtgcc catcgccgtc
     1261 atcggcgtgg acgtcttctt catcgccaag tctcgttcga cggcgacggg ttcggtggcg
     1321 cgcgcgacct cgcccgggag ctcagccgtc cggggagcgg cccacgcgct ctcgtcgagc
     1381 acggtcgcgt tccccgcggc ggacgaagag cccacggcgg aaatccaaac gagtccggag
     1441 gcttccggag cgaacgagcc gccggccgaa gacggtccgc tgctcgacga agacggcgcg
     1501 accgaggagc ctgctccagc gaaacctccg ccgcctcaac atttcgcaac tgtgcaggat
     1561 gcagtggcgg gcagctgctc gaccgtgagc atcgagggtc tcagcaaaca gatcatcgaa
     1621 caagcgcgct gcatcaaccc gaaggcggtc gtgccgctcc cgtcacgacc gaatctcgtc
     1681 acgggtccga acgtgttcc
//
LOCUS       DATIML010001016         6473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1376158, whole genome shotgun sequence.
ACCESSION   DATIML010001016 DATIML010000000
VERSION     DATIML010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6473
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376158"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VLJ38_17555"
     CDS             complement(<1..406)
                     /locus_tag="VLJ38_17555"
                     /inference="COORDINATES: protein motif:HMM:NF022747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3105 domain-containing protein"
                     /protein_id="HSU41390.1"
                     /translation="MRSWLGPSAVIAWALVTQACAGRTQACSGRDELIPAARWLGYCG
                     DLTPGLIAAAGEPTEPVAPLTEQVLDGSACNAVERSYPIADASHVPVCSAVEYGTNPP
                     SSGHHYPVYPEFRVYDDPIPRGFWVHAIEHGGV"
     gene            508..2148
                     /locus_tag="VLJ38_17560"
     CDS             508..2148
                     /locus_tag="VLJ38_17560"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein"
                     /protein_id="HSU41391.1"
                     /translation="MRIPAPDLLHPEGRLWLEVDELRQVITFAFASGIGSDAFERALA
                     KTAAAPSALLPEAFAKDLFVDDFVARCLPFRAGPRPSKQRQRALVALLTKPPADAETV
                     ALRHAVLAELVEKPAYRAGLEQALGVLAEVFAQLESVPRTKDPANTYRRVEILRSLRQ
                     AFDAVADAVPGASSALGRLGDFGRTLRESEGYRHLVELLDHESHLATVDVRLRLARDG
                     HVRGFEILRASENTANRYYGGPIGRFFMRLRLMLRGYRVGQDELLGRLLQAVFDGIEE
                     PLIQLFQVRRDIEFYLAALALRDFAASKGLAVCVPTLTRPAGPRDPLPDSHFESLYNP
                     LLLLEEFPPRPTDLQIGGRSQLVVTGPNSGGKTRLLQAVGLAQLLAQAGFFVPAKRAT
                     LASRPGLFVSVVHEATADAREGRLGTELMRIRTLFERLRWGSLVIVDELCSGTNPSEA
                     EEIFQLVLSELSELEPQTIVTTHFLHFAATLAAERSLPHLEFLQVELDATQTPTFGFV
                     PGVATTSLARKTAERLGVTREALKGLVDDARRAHAGAG"
     gene            2145..3101
                     /locus_tag="VLJ38_17565"
     CDS             2145..3101
                     /locus_tag="VLJ38_17565"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSU41392.1"
                     /translation="MTSKLFGLLGAAGYIAPRHLDAIQATGNELVVACDPRDSVGVLD
                     RYSLSTQFLPTETAFSAFLRRRQRDASVRPIEYVSICTPNHLHPEHCRLAMREHAHVI
                     CEKPLALTPAALDELATLELRTERRIYTILQLRVHERLLALRERLLAERESAREHSVV
                     LTYLTGRGPWYQASWKGDPEKSGGIATNIGIHLFDLLLWLFGASRRERVYVSDQQRMS
                     GMLELEHAKVRWFLSVDPGDVARSSGASRGFTHRSLVVDGEVLDFSDGFGGLHARVYE
                     SILGGRGLGIADARASVELTHRLKRLPLAAPDGDAHDMCRRP"
     gene            complement(3077..3460)
                     /locus_tag="VLJ38_17570"
     CDS             complement(3077..3460)
                     /locus_tag="VLJ38_17570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41393.1"
                     /translation="MLELWTEVVTVLAGSLGSVLLLRARAARRKRRVELSAGALVFVC
                     TPDKKRLIARILSRGSSHVWIELAPGDARWWVPASAIEPLPKFLAARLERERVEGIGA
                     GAGRAVAPRAAGARSGTAQGRRHMS"
     gene            3585..3974
                     /locus_tag="VLJ38_17575"
     CDS             3585..3974
                     /locus_tag="VLJ38_17575"
                     /inference="COORDINATES: protein motif:HMM:NF024835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU41394.1"
                     /translation="MRAIPLLSGFGAAVRERRKERGLTQAQVAESAGIAVETVSRIEG
                     GRLASLSLVLAARVAATLGSTLQTLLAGVRSPAPSDTLRVEERRIVGLLQTVEDAELG
                     RVRRGLQSLLAVSDSRRAQGSSRKRKR"
     gene            4122..4364
                     /locus_tag="VLJ38_17580"
     CDS             4122..4364
                     /locus_tag="VLJ38_17580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41395.1"
                     /translation="MSPHRPAFGFEISLTQPPDPTPPAKPPVPTPDPTPPAKPPSPPP
                     EVPPPFDPPAPPGPVPAPRPIEPGFPGAPPTPIDRQ"
     gene            4659..6308
                     /locus_tag="VLJ38_17585"
     CDS             4659..6308
                     /locus_tag="VLJ38_17585"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HSU41396.1"
                     /translation="MPGSSAGMAGSAGTNSAAIPNVSVKTAASGGSTSSDGGASAGSG
                     SADNCGTPSVGQARLRRLNREQYQRAVRDLLNVSFEPGADFPTDEKVAAFSSNTVTPL
                     ARLGVEQYLDAAVDIADLAVGSLDTLTSCDRSKRGDGACAADLVATLGARAYRRPLTD
                     VESKRYTDLFASAATFEDGARDLLTTLLVSPHFLYAEELASDDTTGAQPLDAYALATR
                     LSLTLWGSVPDASLMQAAAAGQLDTPDHIRAQAEHMLDDARAADTLASFHVQWLGLDA
                     IDELTKEPSAYPSFDAATAVAMRAETAAFADYVFRRADGTLDTLLTSPLAFPQGPLAD
                     IYGIKPNVDPTQPVSLDPTRRAGILTQAAFLAVQAHPNQTSPVRRGVVVLRNVMCADL
                     PNPPPNVNNATPNLDPDATTRERFAEHTASPQCAGCHTLIDPIGFGFEHYDAIGQYRT
                     SENGMPIDSSGELTLADGSTAGFDDAIGLSKALAASPDVRKCVARQWFRYGLGRVETD
                     ADACSLAQIDDAFAASGYKLRELLLALVTSDAFRYVAGGAR"
BASE COUNT         1014 a         2354 c         2040 g         1065 t
ORIGIN      
        1 ccacgccgcc gtgctcaatc gcgtgtaccc aaaacccacg cggaatcggg tcgtcgtaga
       61 cgcggaactc cggatagacg ggatagtgat ggcccgacga cggcgggttc gtcccgtatt
      121 cgacggcgct acacaccggg acgtgagacg catccgcgat cggatacgac cgttcaaccg
      181 cgttgcacgc gctgccgtcg agcacctgtt ccgtgagcgg agcaaccggc tccgtcggct
      241 cgcccgctgc cgcgatgagc cccggcgtca ggtccccgca atagccgagc catcgcgcgg
      301 ccgggatgag ctcgtccctc ccggagcaag cttgcgtcct ccccgcgcaa gcttgcgtaa
      361 cgagcgccca ggcgattacg gccgagggtc cgagccaaga gcgcattccg tggcaggata
      421 gcgcatccgc caatcggcgc tccgacgctc gaaaccggcc cgaaggcctc gaactttggc
      481 tatcgtctgc cgtcgaacgt cgatctgatg cgtatccccg cccccgactt actgcacccc
      541 gagggacgcc tgtggctcga agtggacgag ctccggcaag tcatcacctt tgcgttcgca
      601 tcgggcatcg gctcggacgc gttcgagcgc gcgctcgcga agacggccgc ggcaccgagc
      661 gcgctcttgc ccgaagcctt cgccaaggat ctgttcgtgg acgacttcgt cgcgcgctgc
      721 ttgccgtttc gcgccggacc gcggccgagc aagcagcgac aacgcgcgct ggtggctctg
      781 ctcacgaaac cgcccgcgga cgcggagacg gtcgcgctcc gccacgccgt gctcgccgag
      841 ctcgtcgaga aaccggccta ccgggctggt ctcgagcagg cactcggcgt gctcgccgag
      901 gtcttcgcgc agctcgaaag cgtcccgcgc accaaagacc ctgccaatac ctaccgacgt
      961 gtcgaaatcc tgagaagcct gcggcaggcg ttcgatgccg ttgccgatgc ggtgccgggc
     1021 gcgagctcgg cgctcgggcg gctcggcgat tttgggcgca ctctgcggga aagcgaaggg
     1081 tatcgccacc tcgtcgagct cctcgatcac gaaagtcacc tcgccacggt cgacgtgcgg
     1141 ttgcggctcg cacgcgacgg acacgtgcgt ggcttcgaga ttctgcgcgc cagcgagaac
     1201 accgccaacc gctactacgg cggaccgatc gggcgcttct tcatgcgctt gaggctgatg
     1261 ctgcgcggct accgcgtcgg gcaagacgag ctactcggcc gcttgttgca agccgtattc
     1321 gacggcatcg aggagccgct gatccagctt ttccaagtcc gccgcgacat cgaattttat
     1381 ctggccgcac tcgccctccg cgactttgcg gccagcaagg gcctggccgt ctgcgtaccg
     1441 acgctcacgc gcccggcggg cccgagggat ccgctgccgg acagccactt cgagagcctg
     1501 tataacccgc tactcttact cgaagagttc ccaccgcgcc cgacggatct ccaaatcggc
     1561 ggccgctcgc agctcgtcgt cacggggccg aattccggcg gcaagaccag gttgcttcag
     1621 gccgtgggtc tcgcgcagct gctcgctcaa gccgggtttt tcgtgcccgc caagcgcgcg
     1681 acgctcgcct cgcgccccgg cttgttcgtg tccgtcgtgc acgaggcgac ggcggacgcg
     1741 cgcgaaggac gcctgggcac cgagctcatg cgcatccgca cgctgttcga gcgcctgcgt
     1801 tggggtagtc tcgtgatcgt cgacgagctc tgctccggaa ccaacccgtc cgaagcagag
     1861 gagatcttcc agctcgtgct ctccgagctc tccgagctcg agccgcaaac catcgtgacc
     1921 actcacttcc tgcattttgc cgcgacgctt gcggccgagc gctcgctgcc acacctcgag
     1981 tttttgcagg tcgagctcga cgcaacgcag acaccgacct tcggcttcgt cccgggcgtc
     2041 gcgacgacct ctctcgcccg caagacagcc gagcggctcg gcgtaacgcg cgaggcgctc
     2101 aaaggtttgg tggacgacgc gcggcgcgct cacgccggcg caggatgacg tccaagctct
     2161 tcggtttgct gggcgctgcc ggctacattg cgccgcgcca cctcgacgcc attcaagcga
     2221 ccggcaacga gctcgtcgtc gcgtgcgatc cgcgcgattc cgtcggcgtg ctcgatcgct
     2281 acagcctgag cacgcagttt ctgccgacgg agacggcgtt ctcggcgttc ctgcggcggc
     2341 gccagcgcga cgcgagcgtt cgccccatcg aatacgtctc gatttgcacc cccaaccatc
     2401 tgcatcccga gcattgccgg ctcgcgatgc gcgagcacgc gcacgtcatt tgcgagaaac
     2461 ccctcgccct cacgcccgcc gcgctcgacg agctcgccac gctcgagctt cgcaccgaac
     2521 gccgcatcta cacgatcttg caactgcgcg tgcacgagcg cctgctcgcg ctccgtgaac
     2581 ggctgctcgc cgagcgcgag agcgcgcgcg agcactctgt cgtgctcacc tatctcacgg
     2641 ggcgcggccc ctggtaccaa gcgtcgtgga agggcgaccc cgaaaagagc ggcggtatcg
     2701 cgaccaatat cggaatccat ctcttcgatt tgttgctttg gctcttcggc gcgtcgcggc
     2761 gcgagcgcgt ctacgtctcc gatcagcagc gcatgtcggg gatgctcgag ctcgagcatg
     2821 ccaaagtgcg ctggtttttg tcggtggatc ccggcgatgt cgcgcgatcg tcgggcgcgt
     2881 cgcgcggctt cacgcaccgg tcgctcgtgg tcgacggcga agttctcgat ttttcggatg
     2941 gtttcggcgg actgcacgcc cgcgtttacg agtcgatcct cggcggccgt ggtctcggca
     3001 tcgccgacgc gcgcgctagc gtcgagctca cgcaccgcct gaagcgactg ccgctcgccg
     3061 cgccggacgg cgacgctcac gacatgtgcc ggcgcccttg agccgtgcct gaccgagcgc
     3121 cggccgcccg cggcgcgacg gcccgaccag cgcctgcgcc gatgccctcc actcgctcgc
     3181 gctccaagcg cgcggccagg aatttcggca gcggctcgat cgcgctcgcg ggcacccacc
     3241 agcgcgcgtc gcccggcgcg agctcgatcc aaacgtgact gcttccgcgt gaaagaatgc
     3301 gcgcgatgag ccgcttcttg tctggggtgc acacgaacac gagcgcaccc gccgacagct
     3361 ccacccgccg tttacgccgc gccgcccgcg ctcgtaacaa aaggacgctg ccaaggcttc
     3421 ccgccagaac cgtcaccacc tccgtccaga gctcaagcat gtccttcccc cgtgggcgcg
     3481 cgtcgcagca ttgggccgct ttattgatcc atatagcata tcggtgacta gacttttcgg
     3541 atcatgggcg gggctcggag gttcctctaa aaggcggcga gcacatgcgc gcgatcccgc
     3601 tcctttccgg cttcggagcg gcggtccgcg aacggcgcaa ggagcgcggc ctgacgcagg
     3661 cgcaagtagc cgaatctgcg ggcattgccg tcgaaaccgt ctcgcggatc gaggggggcc
     3721 gcctcgcttc gctgagcctc gtgctcgcgg cgcgtgtggc ggcgacgctt ggctcgacgc
     3781 ttcagacgct gctcgccggc gtgcgcagtc ccgcgccaag cgatacgctc cgtgtcgagg
     3841 agcgccgcat cgtcggcctg ttgcagaccg tcgaggacgc cgagctcgga cgggtgcggc
     3901 ggggcctcca gagcctgctc gccgtgagtg attcccgccg cgcgcaaggt agctcgcgca
     3961 agcgcaagcg gtgagcgcac gttcgccgcg cgccgctcgc gtgacacagc agagccgtct
     4021 cgcctcatgg ccgcgagtcg ctcctgggca ctaaacgcgc ttggttgctc gcgcgcgcgc
     4081 cctgcagcgg gttggtccgc accttgcgga gccttcgtcg catgtcgccg catcgcccag
     4141 cgttcggttt cgaaatttcg ctcacgcagc ctccggatcc gaccccgccc gccaagccgc
     4201 cagtaccgac tcccgatccg accccgcccg ccaagccgcc ctcgcctccg ccggaggtgc
     4261 cgccgccgtt cgatccacca gcgccgcccg gtcccgtccc ggcgccgcgt ccgatcgagc
     4321 ccggcttccc cggcgcgcca ccgacaccca tcgatcggca atgatgcact gcgtttctgc
     4381 ccgaacgcgc ggacgcacgt tgtcgcacac gcggaaaact tcacgtgtct gcgaagcttc
     4441 cgccaatagg ttggagctcg cgaaaattcc gcgcgtccat cacacaaacg ggttaagaaa
     4501 tcccgagctc ccgcgtactc tcgcgcacag tgcagcgtag gctacgcgga tcaatcctcg
     4561 gcattggttt tttctgctcg caagcagggt gcagcttctc gggctccatc gtgtgcgaca
     4621 cgcccggacg ttgccccgag gtcccgggga gccagcaagt gcccgggagt tccgcgggga
     4681 tggcgggcag cgccggcacg aacagcgctg ctattccgaa cgtttcggta aaaaccgccg
     4741 cttccggcgg ttcgacgagc tcggacggcg gcgcgtcggc gggcagcggg tcggccgaca
     4801 actgcggcac gccgagcgtc ggccaagcaa gactccgccg tctcaatcgc gaacagtacc
     4861 agcgtgccgt acgcgatctc ttgaacgtga gcttcgagcc gggcgccgac ttcccgacgg
     4921 acgaaaaagt ggccgcgttc tcgagcaaca ccgtgacgcc gctcgctcga ctcggggtcg
     4981 agcagtacct ggacgccgcg gtggacattg ccgatctcgc cgtcggaagt ctcgacacgc
     5041 tcacgagctg cgaccgcagt aagcgcggcg acggcgcgtg cgcggccgac ctcgtcgcga
     5101 cgctcggtgc acgcgcctat cgccgtccgc tcaccgacgt cgaaagcaag cgctacaccg
     5161 acttgttcgc gagcgctgcg acgttcgagg acggcgcgcg cgacctgctc accacgctgc
     5221 tcgtctcacc gcattttctg tacgccgagg agctcgctag cgacgacacg accggcgcgc
     5281 agccgctcga tgcgtatgcg ctcgcgacgc ggctctcgct cacgctctgg ggcagcgtgc
     5341 ccgatgcttc gctgatgcag gccgccgccg ccggacagct cgatacgccc gatcacatcc
     5401 gcgcgcaggc ggaacacatg ctggacgacg ctcgcgcggc cgacaccctg gcgagctttc
     5461 acgtgcagtg gctcggcctc gatgccatcg acgagctcac gaaggagccg agtgcctatc
     5521 cgagcttcga tgccgcgacg gccgtcgcca tgcgcgccga gaccgccgcc ttcgccgatt
     5581 acgtgttccg gcgtgcggac ggcacactcg acacgctgct cacctcgccg ctcgcgttcc
     5641 ctcaaggacc gctcgccgac atctacggga tcaaaccgaa cgtcgatccc acgcagcccg
     5701 tgagcctcga tccgacccgg cgtgccggca ttctcaccca ggccgcgttc ctggccgtgc
     5761 aagcgcatcc gaaccaaacc tcgcccgtgc ggcgcggcgt cgtcgtgctg cgcaatgtca
     5821 tgtgcgcaga cctgccgaac ccgccgccga acgtgaacaa cgccacgccc aatctcgatc
     5881 ccgatgccac cacgcgcgag cgcttcgccg agcacacggc gagtccgcaa tgcgccggct
     5941 gtcacacgct gatcgacccc atcggcttcg ggttcgaaca ttacgatgcc atcgggcagt
     6001 accgcacgag cgagaacggc atgccgatcg actcgagcgg cgagctcacg ctggcggacg
     6061 gcagtacggc gggtttcgac gacgccatcg ggctttcgaa ggcgcttgcc gccagccccg
     6121 acgtgaggaa atgcgtcgca cggcagtggt ttcgctacgg gctcggccgc gtcgaaacgg
     6181 acgccgacgc ctgctcgctc gcgcagatcg acgacgcctt cgccgcttcc ggctacaagc
     6241 tgcgcgagct cttgctcgct ctcgtgactt ccgacgcctt ccgttacgtc gctggaggtg
     6301 cccgctgatg ggtcgcattc gcaagccagc gcccccgtcg agtcgcaaga tccgacggcc
     6361 gtcacggcgc acgttcctac gcggcctcgg actcggtggt gcactcgctc cgttcctgcc
     6421 gctgctcaac gcgagcgggg ccgaagagcg gccgctccgc ctcgtgctct ggt
//
LOCUS       DATIML010001017         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3105360, whole genome shotgun sequence.
ACCESSION   DATIML010001017 DATIML010000000
VERSION     DATIML010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3105360"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VLJ38_17590"
     CDS             complement(<1..213)
                     /locus_tag="VLJ38_17590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41397.1"
                     /translation="MHAQSHFGRPLLALTCSLALASGCGNSDDDAANTGGTSATTGGA
                     GTGGTHAGAGRGGGTSAGGTKNSGSGG"
     gene            634..1446
                     /locus_tag="VLJ38_17595"
     CDS             634..1446
                     /locus_tag="VLJ38_17595"
                     /inference="COORDINATES: protein motif:HMM:NF018239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XylR N-terminal domain-containing protein"
                     /protein_id="HSU41398.1"
                     /translation="MRAEDLDHKELLELDPEGGLIRFAGQRALLIDAVAMGLLSKYLV
                     DNFGVTAARAVLTQFGFAHGFRMAEAMKAEFNWKSDEEWRQAGTRIHALEGLFRVESG
                     GLDPAAPGGSTLVASYEAEQHLLHFGRSETPACWTLSGLMSGYISRIAGNPIYVLEDR
                     CMGKGDAACHLVGRTREDWGDERAEELGFFDAGRLEACLDVSLQRVMDSLKAAERKLR
                     ERRHALVRVAPDIAEPLGLIAKSGPMRTLLDLARRVAKVDSTTLITGESGTG"
BASE COUNT          254 a          513 c          525 g          272 t
ORIGIN      
        1 accgcccgag ccactgttct tggtcccgcc ggcgctcgtg ccgccgccgc gtccagcgcc
       61 ggcgtgtgtc ccgccagtgc ctgcgccgcc cgtggttgcg ctcgtcccgc cggtgttggc
      121 cgcatcgtcg tcggagtttc cgcagccgct cgcgagcgcg agcgagcagg tcaaagcaag
      181 taacggccta ccgaaatgtg attgtgcgtg catactaatg atctcgactt cgccctaagc
      241 agcttccgtg ccgcgcgaca ttcgacgcgc atcgctcgct ggacgacaca cgggcggtgc
      301 gtcgcgcccc atcaacctga cgcagctccc atcaattcga tggggcaggc gatagcgctt
      361 tttagggatt cgtgaccgta ggtgcgcgtt cgcttcgatg ctccgagcgc gtcaatgtac
      421 gaaccggttg cgctcgggtg tcgcgcgaac gaccctcaac tcacccccgc cgctacgtgg
      481 cgtttgagtc gcctgcggcg gccatacccg cggtggtcgc cccgaccaaa gaaaagctcc
      541 gatttccgcg gctcccggcc cccgaccctc gagacgcagg tggtcgtgtc agtcgttctg
      601 acgtagcgtc actcacttcg agaaaagtag ccgatgcgcg ccgaggatct ggatcacaag
      661 gagctcctgg aattggatcc ggagggaggc ctgattcgct tcgccggaca gcgcgcgctc
      721 ttgatcgacg ccgtggcgat ggggctgctc agtaagtacc tggtcgacaa cttcggcgtg
      781 acggccgccc gagcggtgct cacgcagttc ggcttcgcgc acggcttccg catggccgag
      841 gcgatgaagg cagagttcaa ctggaagagt gacgaggaat ggcggcaggc ggggactcgt
      901 attcacgcgc tcgagggtct cttccgcgtc gagtcgggcg gcctagatcc ggcggcgccc
      961 gggggatcga cgctcgtggc ttcctacgag gccgagcagc atctcttgca tttcggccgc
     1021 tccgagacgc ctgcgtgctg gaccctcagt gggctcatga gcggctatat cagccgcatc
     1081 gcgggcaacc ccatctacgt gctcgaggat cgctgcatgg gcaagggaga cgccgcttgc
     1141 cacctcgtgg gacgcacgcg cgaggactgg ggcgacgagc gggccgagga gctcggcttt
     1201 ttcgacgcgg gcaggctcga ggcgtgcctc gatgtgtcgc tccagcgcgt gatggatagc
     1261 ttgaaagcgg cggagcgaaa gctgcgcgag cgccgacacg cgttggtgcg cgtcgcgccc
     1321 gacatcgcgg agccgctcgg cttgatcgcc aagagcggac cgatgcgcac gctgttggac
     1381 ctcgcgcgac gcgtcgcgaa ggtcgattcg acgacgctca tcacgggcga gagcggcacc
     1441 ggctaagaac gcgtagcccg gctcgtgcac gaggagtcgt cacgtgccgc cggccccttc
     1501 atcgcagtga actgcggagc catcaccgag accctgctcg aagccgagct tttcggacac
     1561 gcgc
//
LOCUS       DATIML010001018         5164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2815888, whole genome shotgun sequence.
ACCESSION   DATIML010001018 DATIML010000000
VERSION     DATIML010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5164
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2815888"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VLJ38_17600"
     CDS             <1..368
                     /locus_tag="VLJ38_17600"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HSU41399.1"
                     /translation="VEKSPSIFFSGMEGSILPIPVAHGEGRAVFEPGTREACESQGLV
                     SLRYVDGRGAPAERYPQNPNGSPAGITGITTPSGRVTVLMPHPERAFRTAQHSWHPPE
                     WGEASPLLRLFRNARAWVG"
     gene            368..928
                     /locus_tag="VLJ38_17605"
     CDS             368..928
                     /locus_tag="VLJ38_17605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41400.1"
                     /translation="MRAEARAALIALVLAVGLVDGLPLPSAERARGFAPWLAGPADAA
                     NRAQAVLLGPFRLAFDWLRVNERWVLFAGASARRFRLEIAARKNSSEGWQLLYRADDE
                     RHRFLADLIEYRRVRGAFNPRTQEPPPGYEAFVAFIARRIFDERPELRDVRVRMERIR
                     IDDRGGYAGTGMYAHERVKRREDVLP"
     gene            925..1911
                     /locus_tag="VLJ38_17610"
     CDS             925..1911
                     /locus_tag="VLJ38_17610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41401.1"
                     /translation="MTAGRLWRRFVAFCDQREGPESVAVVRILVGSVLFLEFAGMANA
                     GLAPDFWLAPPRGLGWAAAADPVGFVRSLGSSPGFVTALWALALAGSFGVAVGLWLRP
                     AALACVAATALLGRLAPDGERAIDVLLRIVLIVLALSRADAAWSLARVRDSRLGRPTV
                     TSIPAWPRLLLFGQLVWVYSSAAQNRGGIEWWPAGGSVALARVLSDPHFARFSPGWTA
                     ALDPLPRVATALTMLFELGSPLLVLFTFADRHPERLGAFGRVVRRFGLRWAWLGLGAS
                     LHLGIALTMRLGMFPYGMLALYPLFVAPEELRAALAWLRRATRRFSAAVAPG"
     gene            complement(1886..3016)
                     /locus_tag="VLJ38_17615"
     CDS             complement(1886..3016)
                     /locus_tag="VLJ38_17615"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSU41402.1"
                     /translation="MFSVRARSPSGQMPAVDTEADLDRALDALAGVIRAYGELAFDLD
                     QVKAAETRAECHALVQRLVLGPARSDANSPSSPPASQRDFGGARRFFEQRRREERDYV
                     VRSSANMRQALQAFAQCLSATMTEDQREDSRVEIELERLVDVVGKKSPDVLEQQLGVL
                     VSLVQTAISKRRERERRQVQDLGRRLVELKAELEVARTQAIQDPLTELYNRAALSEEL
                     ERVASLAAFLSSEPCLLLLDIDHFKLVNDKHGHPAGDAVLKAVADNIARHFMRREDFV
                     ARYGGEEFAVLARESTLERVLQRSERLRDTQGRLEIPTATGPVTVTISIGIARHEPGE
                     AAAIWLERADRALYAAKHAGRDRVDVAPALPLASLIPARPPR"
     gene            complement(3152..4192)
                     /locus_tag="VLJ38_17620"
     CDS             complement(3152..4192)
                     /locus_tag="VLJ38_17620"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSU41403.1"
                     /translation="MSASPIARGSWFALGAAVLFGATAPLVKQLGAGVGSFATAAALY
                     AGAALGAGAFASGSERRLGRRELGRVALVAVCGAALAPAALAWGLQHTSAVAASLLLN
                     LEALFTLILARIAYREPTGSRVMLAVLAMLAGGASLALRAGSFARSDALGLGAVALAT
                     LLWALDNTLSRPLADFDPRAVVFWKATLGVGLASGAGLVLAERWPRGVSLLGLLACGA
                     AGYGVSLRLYLRAQRAIGAARTGSLFAVAPFVGVALGLGLGDRNGLGFVALSTALFGL
                     AVYLHVTENHHHFHLHGPLEHEHAHRHDDGHHDHVHEPPVQGSHSHPHQHGRRAHTHS
                     HGADLHHRHGHD"
     gene            complement(4313..>5164)
                     /locus_tag="VLJ38_17625"
     CDS             complement(4313..>5164)
                     /locus_tag="VLJ38_17625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41404.1"
                     /translation="LVPATDSRNAATAPVAPARLAVPSVHRTLPMGLPNETVSATPEI
                     ARTLQSTAPAPMAAKARPPSNPPRKLTAARVILFIAAAIGATAFGMVIALLTHRAPND
                     APLSRQAAPVDEAHIEPSAAVPPRTVTTEGRATALGPTAAAGSTAPGVTPQSLATASA
                     PAATASVADTTTAAAATAASAAPSAAPPAPATSAQPERPAPVPPPSFDLRKLPRDRAA
                     LVVHSSANTHVFVHGVDYGSTNQALMTSCGIRFVRLGRALGDFLEPGQSYVIKCGKLN
                     ELTIEPR"
BASE COUNT          685 a         1814 c         1860 g          805 t
ORIGIN      
        1 ccgtcgaaaa atcgccctcg atcttctttt ctgggatgga gggctcgatt ttgccgatcc
       61 ccgtggcgca cggcgaaggt cgcgccgtgt tcgagcccgg cacgcgggaa gcgtgcgaaa
      121 gccagggcct cgtctcgctc cgctacgtcg acggcagggg cgcgccggcg gagcgctacc
      181 cacaaaaccc gaacggctcg cccgccggca tcacgggcat cacgacgccg agcggtcgcg
      241 tcaccgtgct catgcctcac cccgagcgcg cgtttcgcac ggcgcagcat tcctggcatc
      301 cgcccgagtg gggcgaggcg tctccgctcc tccgtctgtt ccgaaacgcg cgcgcctggg
      361 tcggctgatg cgcgccgagg cgcgcgcggc gctcatcgcg ctcgtgctcg ccgtggggct
      421 cgtggacggc ttgccgctcc cctccgccga gcgcgctcgg ggcttcgccc cgtggcttgc
      481 cggtcctgcc gatgcggcga accgcgcgca ggccgtccta ctcgggccgt tccggttggc
      541 cttcgactgg ctgcgcgtca acgagcgctg ggtgctcttc gcgggcgcga gcgcgcggcg
      601 atttcgcctg gagatcgccg cacgcaagaa ctcgagtgaa ggctggcagc tgctctaccg
      661 tgcggacgac gagcgccatc gtttcctcgc ggacctgatc gagtatcggc gcgtgcgcgg
      721 cgccttcaac cctcgtacgc aggagccgcc gccgggctac gaggcgttcg tcgcgttcat
      781 cgcgcgtcgg atcttcgacg agcgtcccga gctccgcgac gtgcgcgtac gcatggagcg
      841 catccgtatc gacgacaggg gcggctacgc cggcaccggc atgtacgccc acgaacgcgt
      901 gaagcgccgc gaggacgtgc tgccgtgacc gccggcaggc tctggcgccg cttcgttgcg
      961 ttctgcgatc agcgcgaagg tccggaaagc gtcgcggtcg ttcggatcct cgtgggcagc
     1021 gtgctctttc tcgagttcgc gggcatggcc aacgcaggtc tggcaccgga tttttggctc
     1081 gcgccgcccc gtgggctcgg ctgggccgcc gccgccgacc cggtaggttt cgtacgctcg
     1141 ctcggaagct cgccgggctt cgtgaccgcg ctgtgggcgc tcgcgctcgc tggttcgttc
     1201 ggtgtcgccg tcggactttg gctgcgcccc gccgccctcg cgtgcgtcgc ggcgacggcg
     1261 ttgctcggcc ggctcgctcc cgacggcgag cgcgccatcg acgtactgct gcgcatcgtg
     1321 ctcatcgtgc tcgcgctgtc gcgagccgac gcggcttggt cgctcgctcg cgtgcgtgac
     1381 agccggctcg gacgcccgac ggtcacgtct attcccgcgt ggccgcgcct gctcctgttc
     1441 gggcagctcg tgtgggtcta ctcgtcggcg gcccagaacc gcgggggcat cgaatggtgg
     1501 ccggcgggcg gctccgtcgc gctcgctcgc gtgctctcgg atccgcattt tgcgcgattt
     1561 tcgccaggct ggacagcggc gctcgacccg ctccctcgcg tggcgacggc gctcacgatg
     1621 ctgttcgagc tcggttcgcc gctgctcgtc ctcttcacgt tcgccgatcg ccaccccgag
     1681 cggctcggcg cgttcggccg cgtcgtccgg cgcttcggtt tgcgctgggc gtggctcggg
     1741 cttggcgcga gtctgcacct cggcatcgcg ctcacgatgc gcctcggtat gttcccgtac
     1801 ggcatgctcg cgctctaccc gctcttcgtg gccccggaag agctccgcgc cgcgctggct
     1861 tggctacgcc gcgcgactcg gcgcttcagc gcggcggtcg cgccgggatg agcgaggcga
     1921 gcgggagggc gggcgcgacg tcgacgcgat cgcggccggc gtgtttggcg gcgtagagcg
     1981 cgcggtcggc gcgttcgagc caaatggccg ctgcttcgcc gggctcgtgc cgcgcgatgc
     2041 cgatcgagat ggtcacggtc actgggcccg tggcggtggg aatttcgagt cgtccctgcg
     2101 tgtcccgcag ccgctcggaa cgctggagta cgcgttcgag cgtgctctcg cgagcgagca
     2161 ccgcgaactc ttcgccgccg taacgcgcga cgaaatcctc ccgccgcatg aaatggcggg
     2221 cgatgttgtc ggccacggct ttgagcaccg catcgcccgc gggatggccg tgcttgtcgt
     2281 tcacgagctt gaagtgatcg atgtcgagca acaagaggca cggctcggag gagaggaacg
     2341 ctgcgagcga ggcgacccgc tcgagctcct cggagagagc ggcgcggttg tagagctcgg
     2401 tcagcggatc ttgaatcgcc tgggtgcgcg cgacctcgag ctcggccttg agctcgacca
     2461 agcgccgccc gagatcttgg acctggcggc gctcgcgctc gcggcgcttc gaaatcgcgg
     2521 tttgcacgag cgaaacgagc accccgagct gctgctcgag cacgtcgggg ctcttcttgc
     2581 cgaccacgtc gaccaagcgc tcgagctcga tctcgacgcg cgaatcctcg cgctgatctt
     2641 cggtcatcgt ggcgctcagg cactgcgcga aggcttgcaa ggcctgccgc atattggccg
     2701 agctacgcac cacgtaatcg cgctcctcgc gcctccgctg ctcgaagaaa cgtcgcgctc
     2761 cgccgaagtc gcgctgactc gcgggcgggg aagacggcga gttcgcgtcg gagcgcgccg
     2821 gccccagcac gagccgctga acgagcgcgt ggcactcggc ccgggtctcg gctgccttca
     2881 cctgatcgag atcgaaggcg agctcaccgt aggcgcggat cacgccggcc agcgcatcga
     2941 gcgcgcgatc gagatcggcc tcggtgtcga cggcgggcat ctgaccgctc gggctccgcg
     3001 ctcggacact gaacatcaaa cggatctaac ggctcgcccc aggctcagct tgagtcccaa
     3061 cccggcgcgc ccgcccgtgc gtgccgtccg cgaccagcgg aatttgaata gcgtcaacgc
     3121 attcggccgc ttgaggtgct ccgccaggcg ctcagtcatg cccgtggcgg tgatgtaggt
     3181 ccgcgccatg cgagtgagtg tgagcgcggc ggccgtgctg gtgggggtga ctgtgggagc
     3241 cctgcaccgg cggctcgtgg acgtgatcgt gatggccgtc gtcgtggcgg tgcgcgtgct
     3301 cgtgttcgag cggtccgtgc aggtgaaagt ggtgatggtt ctcggtgacg tggaggtaca
     3361 cggcgagacc gaagagcgca gtcgacagcg cgacgaagcc gagcccgttg cgatcgccta
     3421 agccgagtcc gagcgcgacg ccgacgaacg gcgcgacggc aaagagcgac cccgtgcgcg
     3481 cggcgccgat cgcgcgctgg gcgcgcaagt aaagccgcag gctcacgccg tagcccgcgg
     3541 cgccgcacgc gagcagcccc agcagcgaaa cccctcgcgg ccagcgctcc gctaaaacca
     3601 gccccgcgcc ggacgcgagg cccacgccga gcgtcgcctt ccagaacacc acggcgcgcg
     3661 gatcgaagtc ggcgagcggc cggctcagcg tgttgtccaa ggcccacagc agcgtcgcca
     3721 gcgccacggc cccgagcccg agcgcgtcgg agcgagcgaa tgagcctgcc cgcagggcca
     3781 gtgacgcgcc gcccgcgagc atcgcgagga cggcgagcat cacgcgcgag cccgtcggct
     3841 ctcgatacgc gatgcgcgct aggattaggg tgaacagcgc ttcgaggttc aagagcaacg
     3901 acgccgccac ggcgctcgta tgctgcagac cccaggcgag cgcggcaggt gcgagcgcgg
     3961 cgccgcacac ggcgacgagc gcgacgcggc cgagctcgcg ccggccgagg cggcgctcgc
     4021 tgccgctggc gaacgcgcct gcgccaagcg cggcccccgc gtagagcgct gcggcggtcg
     4081 cgaacgagcc gacgccggcg ccgagctgct tgacgagcgg ggccgtcgct ccgaacagaa
     4141 ccgcggcgcc gagggcgaac cagctaccgc gtgcgatggg cgacgcgctc acgcactcca
     4201 agatacacga gagtcgcacg gggccgtcgc tgagccgtac ggctccgctt tcacgccgta
     4261 cggcgccgtc ggctccgttt cgcgccgtac gccgccgcgg acggctcgca agctagcgcg
     4321 gctcgatcgt gagctcgttc agcttgccgc acttgatgac gtacgactgc cctggctcga
     4381 gaaaatcgcc gagcgcgcgt ccgagccgca cgaagcggat cccgcacgac gtcatgagcg
     4441 cttggttcgt cgagccgtag tccacgccgt gcacgaacac gtgcgtgttc gccgacgagt
     4501 gcacgacgag cgcggcgcgg tcgcgcggca gcttccgcag atcgaagctc ggcggcggca
     4561 cgggtgctgg acgctccggc tgagccgagg tcgcgggggc cggcggcgcg gcgctcggcg
     4621 cagcactcgc cgccgttgcc gcggccgccg tcgttgtgtc cgccacgctg gcggtcgctg
     4681 cgggcgcgct cgccgtcgcg agcgactgag gagtgacgcc cggcgctgtt gaccctgccg
     4741 ctgctgtcgg ccccagcgcc gtggcacggc cttcggtcgt gaccgtccgt gggggcactg
     4801 ccgcgcttgg ctcgatatgc gcttcatcca ccggcgctgc ttggcgcgac aggggcgcgt
     4861 cgttcggggc gcggtgcgtg agcagcgcga tgaccatgcc gaacgcggtc gcgccgatgg
     4921 ccgcggcgat gaacaagatc acgcgcgcgg ccgtcaactt gcgcggcgga ttcgacgggg
     4981 gccgagcctt cgccgccatc ggcgctggcg ccgtggactg tagcgtgcgc gcgatctcgg
     5041 gcgtcgcgga taccgtctcg ttgggcagcc ccatcggcag cgtccgatgg acgctcggga
     5101 cggccagtcg tgccggcgcg accggcgcag tggccgcgtt gcgggagtcc gttgccggca
     5161 cgag
//
LOCUS       DATIML010001019         1866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2526801, whole genome shotgun sequence.
ACCESSION   DATIML010001019 DATIML010000000
VERSION     DATIML010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2526801"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..404)
                     /locus_tag="VLJ38_17630"
     CDS             complement(<1..404)
                     /locus_tag="VLJ38_17630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HSU41405.1"
                     /translation="MQPYDEWLRKLLLLPPAASSVARPIDRLHFTVISVTMLGATLLV
                     LVGGFFCIRYRQRRPRGPSDTRPVAPTPPRWAEFGLVGFLFTLFLAWWVVGFKQYVEL
                     AQAPRDAIDVYVTAKQWMWKFSYPDGSHTIDE"
     gene            complement(417..1220)
                     /locus_tag="VLJ38_17635"
     CDS             complement(417..1220)
                     /locus_tag="VLJ38_17635"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HSU41406.1"
                     /translation="MKYAALAASLLVLVTIFPASAHAQPAPERIGVDEHVGAQLLLDV
                     TLRDQDNRRRELGEVFDGKRPVILQFAYYHCPMLCDLTLRELALRLRELGWKLGDDYR
                     ALTVSIDPSDNPLVAGAKREKVLGLLPSAPQGAWPFFVAGESSIAALTERAGYRYYHD
                     EATGQYAHPAVTLILTPRGTIARYLYGPLEDAGDLALALREARAGRGGATALLDRTIL
                     SCFHYDPSTRRYALLIGGVMRGGAALIALALAVAIFFFVRRGRARLHAA"
     gene            complement(1217..1600)
                     /locus_tag="VLJ38_17640"
     CDS             complement(1217..1600)
                     /locus_tag="VLJ38_17640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41407.1"
                     /translation="MAEPVKSNETAHEFRQEEELIDRGWVVISGAILLPFVVVLGVAA
                     KVLLGATSRADAAQYVAAKPEPADRVSDVHAELFRRPLAGELLKQQQQKVLGRYGWVD
                     RQHGVVRVPIDVAMELVASGAKEAP"
     gene            complement(1603..>1866)
                     /locus_tag="VLJ38_17645"
     CDS             complement(1603..>1866)
                     /locus_tag="VLJ38_17645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41408.1"
                     /translation="ALLSFRLKRRPRQLAAVALWCLASHYVHLHWLVTAESERRGFEW
                     LDLAAFVAVTGLGVGCAILLQRGKSTVAVGDPRYAAALAYRSR"
BASE COUNT          327 a          625 c          651 g          263 t
ORIGIN      
        1 aactcgtcga tggtatggct gccgtcgggg tacgaaaact tccacatcca ttgtttggcg
       61 gtgacgtaca cgtcgatcgc gtcgcgcggc gcttgagcga gctcgacgta ctgcttgaat
      121 ccaacgaccc accacgcgag aaagagcgta aaaaggaagc cgacgagacc gaactcggcc
      181 cagcgcggcg gggtgggcgc cacgggcctc gtatcgctcg ggccgcgcgg gcgccgctgc
      241 cgatagcgaa tgcaaaagaa cccgcccacg aggacgagca gggtcgctcc gagcatcgtc
      301 acgctgatca cggtgaagtg caggcgatcg atcgggcgcg ccaccgacga ggccgccggg
      361 ggcagcagca agagctttcg gagccattcg tcgtagggct gcatgaagcc tccgggtcac
      421 gcggcgtgca ggcgcgcccg tccgcgccgc acgaagaaga agatcgcgac ggcgagcgcg
      481 agcgcgatga gcgccgcgcc gccgcgcatg acgccaccga tcaagagcgc gtaccggcgc
      541 gtgctcgggt cgtagtgaaa acacgagagg atcgtgcgat cgagcagcgc cgtcgcgccg
      601 ccgcgaccgg cccgcgcttc gcgcaacgcg agcgcgaggt cgccggcgtc ctcgagcggg
      661 ccgtagagat agcgcgcgat ggttccgcgc ggcgtgagga tgagcgtgac ggccggatgg
      721 gcgtattggc ccgtcgcctc gtcatggtag tagcgatagc cggcccgctc cgtgagcgcc
      781 gcgatgctcg actcgcccgc gacgaagaat ggccaggcac cctgcggggc gctcggcaag
      841 agcccgagca ccttctcgcg cttggccccg gccacgagcg ggttgtcgct cggatcgatg
      901 ctgaccgtga gcgctctgta gtcgtcgccg agcttccagc cgagctcgcg caagcggagc
      961 gcgagctcgc gcagcgtgag atcgcagagc atcgggcagt ggtaataggc aaactgcagg
     1021 atgacgggcc gcttgccgtc gaacacctcg ccgagttcgc ggcgccgatt gtcctgatcc
     1081 cggagcgtca cgtcgagcag aagctgggcg ccgacgtgct cgtcgacgcc gatgcgctcg
     1141 ggtgccggct gcgcgtgggc cgaggccggg aagatcgtga cgagcacgag caagctcgcc
     1201 gccaaagccg cgtatttcat ggtgcctcct tggcgccgct cgcgacgagt tccatcgcaa
     1261 cgtcgatggg gacccgcacg acgccgtgct gtcgatcgac ccagccgtag cgcccgagca
     1321 ccttttgctg ctgctgcttc aggagctcac cggcgagcgg gcgccggaag agctcggcat
     1381 gcacgtccga gacccggtcg gcgggctccg gtttggctgc tacgtattgc gctgcgtctg
     1441 cccggctcgt ggcacccaag agcaccttcg ctgcgacgcc gagcacgacg acgaacggca
     1501 gcaggatcgc gccgctgatc acgacccagc cgcgatcgat gagctcttcc tcctgccgga
     1561 attcgtgtgc ggtctcgttc gatttcacgg gttcggccat gctcaacgac tccggtaggc
     1621 gagcgccgcc gcgtaacggg ggtccccgac ggccaccgtc gacttgccgc gctggagcaa
     1681 aatcgcacag ccaaccccga gccccgtcac ggcgacgaac gcggcgagat cgagccattc
     1741 gaagccgcgc cgctcggact ccgccgtgac gagccagtgc aggtgcacgt aatgcgacgc
     1801 gagacaccag agcgccacgg ccgcgagctg gcgcggccgg cgcttgagtc gaaacgacaa
     1861 gagcgc
//
LOCUS       DATIML010001020         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_216193, whole genome shotgun sequence.
ACCESSION   DATIML010001020 DATIML010000000
VERSION     DATIML010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216193"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..1074)
                     /locus_tag="VLJ38_17650"
     CDS             complement(133..1074)
                     /locus_tag="VLJ38_17650"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU41409.1"
                     /translation="MLLSSAMRRLDRTLRRIADKDVIVCLVGESGSGKEVLARRIHEL
                     STRRAERFVPINCAAIPDALFESELFGHERGAFTGASELMRGKVEAAAGGTLFLDEIG
                     ELPLGMQAKLLRFLEGLRFMRVGGSEKIHADVRLICATLRPLEDEVRRGTFRADLYYR
                     IQGITLSLPPLRERRSDIAPLAAALLAELAHKHAVKAPKLTRAAVTAFQSYGWPGNVR
                     ELRNALEQLCLLRPGRSVRAADLPPAISLAEPHATNTPSPPRTLEISLDDPLEANVDR
                     IIQAAVALERGNRSRAADRLGIGLRTVQRKLSTSRTT"
     gene            1302..>1661
                     /locus_tag="VLJ38_17655"
     CDS             1302..>1661
                     /locus_tag="VLJ38_17655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HSU41410.1"
                     /translation="MSRRSSLLSFFPARLAVPRVPFAAAIRKSFAQGYDRAALRADVL
                     AGIVVGIVALPLSMALAIAVGVAPQHGLYTAIVAGIVVALTGGSKFQITGPTAAFVVI
                     LAPIVSREGIAGLLTAGL"
BASE COUNT          224 a          570 c          575 g          292 t
ORIGIN      
        1 gacccacgtg ggggcagctc atttcccgca cacgaaaacg tgaactgaac gcgccccttc
       61 gagcggccgc tgcgcttggc cgcggacggc ccctccgccg tcccactcgc ggaaacgcag
      121 gcgcccgcgt cactaggtag tgcggctcgt gctcagcttg cgctgcaccg tgcgcaggcc
      181 aatgccgagc cggtcggccg cacgcgagcg attgccgcgc tcgagcgcca cggctgcctg
      241 gatgatgcgg tcgacgttcg cctcgagcgg gtcgtcgagg ctgatttcca gcgtgcgtgg
      301 cgggctgggc gtgttcgtgg cgtgcggctc cgcgaggctg attgcggggg ggaggtccgc
      361 cgctcgcacg ctccgccccg gccgcaacaa gcagagttgc tcgagggcgt tcctgagctc
      421 gcgcacgttc ccgggccagc cgtagctctg gaacgcggtg accgcggcgc gtgtgagctt
      481 gggcgccttg acggcgtgct tgtgcgcgag ctcggcgagc agcgcggcgg cgagcggagc
      541 gatatcgctg cggcgttccc gcaggggagg taaggacagc gtgatgcctt ggatgcggta
      601 gtagagatcg gcgcggaacg tgccgcggcg tacctcgtct tcgagcggac gcagcgtcgc
      661 gcagatcaaa cggacgtcgg cgtggatctt ctcggagccg cccacgcgca tgaaacggag
      721 gccctcgagg aagcgaagca gcttggcctg catgcccaag ggcagctcgc cgatctcgtc
      781 gaggaagagc gtgccacccg ccgccgcttc gaccttgccg cgcatgagct cgctcgcacc
      841 cgtgaacgcg ccgcgttcgt gaccgaagag ctcgctctcg aacagggcgt ccgggatcgc
      901 ggcgcagttg atcgggacga agcgctcggc gcgccgagtc gagagctcgt gaatgcgccg
      961 ggcgagcacc tccttcccgc tgccactctc gcccaccaag cagacgatca cgtccttgtc
     1021 ggcaatgcgc cgcagcgtgc ggtcgagccg ccgcatggcg ctcgaaagca gcacgggctc
     1081 gacctctggc ttgattcggc gccgaagcgg catcgcgact gcaaatggta cgccaatttg
     1141 gcgcggatgc accgccggcg ccgtttttcg ccgatcccac gtcttcatgc tcgtcgatcg
     1201 agccgtattg tcgaggtggc tcgcgtcttg ctccttgggc aggcaactat gttggatcgt
     1261 cgcgtcttgg cgtggcctgc gcctgtggca ggttgttgat cgtgtcgaga cgtagctccc
     1321 tgctctcgtt ttttcccgcc cggctcgccg tgccgcgcgt gcctttcgcc gcggccatcc
     1381 gcaagtcctt cgcgcagggc tacgaccgcg cagcgctgcg cgccgacgtg ctcgccggta
     1441 tcgtggtcgg catcgtcgcc ttgccgctgt cgatggcgct cgccatcgcc gtcggtgtcg
     1501 cgccccagca cggcctttac accgccatcg tcgcgggcat cgtcgtcgcc ctcacgggcg
     1561 ggtcgaagtt ccaaatcacg ggccccacgg cggcgttcgt cgtgatcctc gctcccatcg
     1621 tctcgcgcga gggtatcgcg ggactgctca ccgcggggct g
//
LOCUS       DATIML010001021         1651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4547997, whole genome shotgun sequence.
ACCESSION   DATIML010001021 DATIML010000000
VERSION     DATIML010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4547997"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1222
                     /locus_tag="VLJ38_17660"
     CDS             <1..1222
                     /locus_tag="VLJ38_17660"
                     /inference="COORDINATES: protein motif:HMM:NF017722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HSU41411.1"
                     /translation="STTLAELDHAEITYALDDASDSERNRGGRAPADVSSSSPHTLLL
                     GLKQNRNYTFHIEASSKAGVTCTSSDYHFTTGTLPNAPAITRTAADPSAQAGGFVITT
                     GGFGSAALVAIVDADGSIVWAAPGPTSASRARFDWEAKNLWVLTANAQNGAADVRSIS
                     LDGLTLLSTPSGLEHAHHDFVAMPGGVIATFVWSKSGIDQESDLVARSPDGSVKTLFH
                     VGSNLYAGGPSAQGGGAHSYHCNSLAYYAADQSFTIGDRNPSSFVKVKQSGELEWQFG
                     GTCSGAKAKACVPGTWQINHGHQLLDDGTFLFFNNTSMGSTNPSNADEFALSLSDTLH
                     ASSVKQWSGGAHEHSDTLGDVQRLPNGNTLVTFSNVGTIYELDTTWNVVQTLRASSFG
                     YSEWRETLYGPPPR"
     gene            1328..>1651
                     /locus_tag="VLJ38_17665"
     CDS             1328..>1651
                     /locus_tag="VLJ38_17665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSU41412.1"
                     /translation="MQPSLYAIDFGTSNSLLVAVNAEHIDPPLALDPLARDPSVFRSI
                     SCFSEGTWSFGAAALERYVSEGMQGRFLRSLKRFLPMLSFNETRIGTKSVTLEALVGL
                     FLREMK"
BASE COUNT          308 a          571 c          501 g          271 t
ORIGIN      
        1 gtccacgacg ctcgccgagc tcgaccacgc cgaaatcacc tacgcgctcg acgacgcctc
       61 ggacagcgaa cgaaaccgcg gcggtcgcgc tcccgcggac gtaagttcga gctcgcccca
      121 cacgctcctc ctcggcctga agcagaatcg caactacacg ttccacatcg aagccagctc
      181 caaagccggc gtgacgtgca cgagctccga ctaccacttc acgacgggaa cccttcccaa
      241 cgcgccggcc atcacgcgca cggcggccga cccgagcgcg caagcgggcg gcttcgtcat
      301 cacgacgggc ggcttcggca gcgcagcgct cgtcgcgatc gtcgacgccg acggcagcat
      361 cgtctgggcg gcgcctgggc ccacgagcgc gagccgcgcg cgcttcgact gggaagcgaa
      421 gaatctctgg gtcctcaccg ctaacgcgca aaacggcgca gccgacgtgc gttccatctc
      481 cctcgacggc ctcacgctcc tctcgacccc gagcggcctc gagcacgcgc accacgactt
      541 cgtcgccatg ccgggcggcg tgatcgcgac gttcgtctgg agcaagagcg gcatcgatca
      601 ggaaagcgac ctcgtcgcgc gttcgcccga cggtagcgtc aagacgctct ttcacgtggg
      661 ctcgaacctc tacgccggcg ggccgagcgc ccaaggcggc ggcgcgcaca gctaccactg
      721 caattcgctc gcctattacg ccgccgacca gagcttcacc atcggcgacc gcaatccgag
      781 ctcgttcgtg aaggtgaagc agagcggcga gcttgaatgg cagttcggcg gaacgtgcag
      841 cggagcgaaa gccaaagcgt gcgtcccggg cacttggcaa atcaatcacg gtcatcagct
      901 actcgacgac ggcacgttcc tgttcttcaa caacacgagc atgggcagca cgaatccctc
      961 gaatgcggac gagttcgcgc tcagtctatc ggacacgttg cacgcctcgt ccgtgaagca
     1021 gtggtcgggc ggcgcgcacg aacacagtga cacgctcggc gacgtgcagc gcctgccgaa
     1081 cggcaacacg ctcgtgacgt tctcgaacgt gggcacgatc tacgagctcg atacgacttg
     1141 gaacgtcgtg cagacgctgc gcgcgagctc gttcggttat tccgagtggc gcgaaaccct
     1201 ctacggcccg ccgccgcgtt gagctgcccc gccaactccg aatttccgct tatccagcga
     1261 ccctgacgag agggtacagg agagttcata gattgtaaag gtgcgcggct actccgagac
     1321 tccgcgcatg cagccgagcc tctacgccat cgatttcggg accagcaact ccctgctcgt
     1381 cgcagtgaat gcggagcaca tcgacccgcc gctcgcgctc gatccgctcg cgcgtgatcc
     1441 gtcggtcttt cgcagcatct cgtgtttttc cgagggcacg tggtcgttcg gcgcggcggc
     1501 gctcgaacgc tacgtgtcgg agggcatgca ggggcgcttc ttgcgttcac tcaagcgctt
     1561 cttgccgatg ctttccttca acgagacgcg catcgggacg aagagcgtga cgctcgaagc
     1621 gctcgtgggt ctgttcttgc gcgaaatgaa g
//
LOCUS       DATIML010001022         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2237434, whole genome shotgun sequence.
ACCESSION   DATIML010001022 DATIML010000000
VERSION     DATIML010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2237434"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..1223
                     /locus_tag="VLJ38_17670"
     CDS             54..1223
                     /locus_tag="VLJ38_17670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU41413.1"
                     /translation="MSLRERRTIVCLSSQPWQDGMWTNKQHIMSRLARGELGWSPLAA
                     FAEPVSYEQAGVTVLDFWSPRVLVRKKPASHRWSIWANFELRRELLARYLERLGVSDA
                     VLWVYHPGYGARIAELPHSLLLYDCVDEYSEFPTYKPDPRWLVEREAALCARADVVIT
                     TSAGLYAKKRPLNPERTHLVHNVGDFEHFSRARAETTRVPDDLAALPRPVVGFLGAVS
                     DYKLHAGWLTALAQKHRDYSLVLVGPVGVGDPTTDVSRLLAEPNVHLLGHRPYEVLPN
                     YVKGFDLGVIPYRINEYTTYSFPIKFFELLASGKPLVISDLPALREYYERVAVARTSD
                     EFVLACEAALAHPDAGREERLALAAENTWEHRVERILVHVERALAEKARLAGAST"
     gene            1331..>1660
                     /locus_tag="VLJ38_17675"
     CDS             1331..>1660
                     /locus_tag="VLJ38_17675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41414.1"
                     /translation="MDAKKKPEPARQAGALVFGTTLATLSSALTPLLIVRLIGKADVA
                     RLLSITLVYETLAMLLSIGLPYTMLYQVSNREAPARAAIARRIARSASLLGLGGAALV
                     ALVAGIVA"
BASE COUNT          255 a          565 c          564 g          276 t
ORIGIN      
        1 ctgctcgagc tgctcgcggg actcggcgtc gattggcgcg cgggtggggg cgcgtgagtt
       61 tgcgcgagcg gcggacgatc gtgtgcctgt cgtcgcagcc gtggcaggac ggcatgtgga
      121 cgaacaagca gcacatcatg agccggctcg cgcggggtga gctcggctgg tcaccgctcg
      181 cggcgttcgc cgagcccgtg agctacgagc aggcgggcgt cacggtgctc gatttttggt
      241 caccgcgcgt gctcgtgcgc aaaaagccgg cgagccaccg ctggtcgatt tgggccaatt
      301 tcgagctccg gcgcgagctc ctcgcgcgtt acctcgagcg gctcggcgtg agcgacgccg
      361 tgctctgggt ctatcacccc ggttatggcg cgcgcatcgc cgagctcccg cactcgctgc
      421 tgctctacga ctgcgtcgac gagtacagcg agtttcccac gtacaagccg gatccacgct
      481 ggctcgtcga acgcgaggcg gcgctctgcg cgcgcgcgga cgtggtcatc acgacgagcg
      541 ccgggctcta cgcgaagaag cggccgctca atcccgagcg cacgcacctc gtgcacaacg
      601 tgggcgactt cgagcacttc agccgcgccc gcgcggaaac gacgcgcgtc cccgacgact
      661 tggcggcgct cccgcggccc gtcgtcggtt tcctcggcgc cgtgagcgac tacaagctac
      721 acgccggctg gctcacggcg ctggcgcaga agcaccgtga ctattcgctc gtgctcgtcg
      781 gccccgtcgg cgtcggcgat ccgacgacgg acgtgagcag gctcttggcc gagccgaacg
      841 tgcatttgct cggtcatcgc ccgtacgaag tgttgccgaa ctacgtcaaa ggcttcgatc
      901 tcggcgtcat cccctatcgc atcaacgagt acacgacgta ctcgtttccc atcaaatttt
      961 tcgagcttct cgcgagcggc aaaccgctcg tcatcagcga tttgcccgcg ctccgcgagt
     1021 actacgagcg cgtggcagtc gcgcgcacga gcgacgaatt cgtgctcgcg tgtgaagcgg
     1081 cgctcgcgca tcctgacgcg gggcgcgaag agcgtctcgc gctcgcggcc gagaacacct
     1141 gggagcaccg cgtcgagcgc atcctcgtgc acgtcgaacg cgccctggcg gaaaaggcgc
     1201 ggctcgccgg ggcgagcacg tgaagcgcct gctcgagcac gtcgtggtaa gtcctcgatc
     1261 gcgcgcaatt catgcgaaaa gcgcgcggta gccgcccgct ctagaacgcg gtgtgatacg
     1321 aggcccgcgc gtggacgcga agaagaaacc cgagcccgcc cgacaagcgg gggcgctcgt
     1381 gttcggcacg acgctcgcga cgctctcgtc ggcgctcacg cctctgctca tcgtgcggct
     1441 gatcggcaaa gccgacgtcg cgcgtctgct gtcgatcacg ctcgtttacg agacgctcgc
     1501 gatgctgctc agcatcggcc tgccgtacac gatgctgtac caggtgagca accgcgaagc
     1561 gccggcgcgc gctgcgatcg cgcgtcgcat cgcgcgatcg gcgagcttgc tcggcctggg
     1621 cggcgcggcg ctcgtggcgc tggtcgccgg gattgtcgca
//
LOCUS       DATIML010001023         4339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1376825, whole genome shotgun sequence.
ACCESSION   DATIML010001023 DATIML010000000
VERSION     DATIML010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4339
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376825"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VLJ38_17680"
     CDS             complement(<1..229)
                     /locus_tag="VLJ38_17680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41415.1"
                     /translation="MSLTAKQIAELRTRLVAERARLQADVSTLSPLRETDASVGDEMD
                     EAESSLEQHQAIGRAERDRGHLMDVEAALAKI"
     gene            469..1089
                     /locus_tag="VLJ38_17685"
     CDS             469..1089
                     /locus_tag="VLJ38_17685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41416.1"
                     /translation="MGLAGLAWRVLGLSQGRWVQGVPLVLCAFVVGCHGGDDDDDKAP
                     TCSVPADARGSDACHAWQQAICDYAAKCGTLAQCDCIAQARAITCASDDDATRCTQAL
                     ASAACTATSDLSACDLVAMADPAPAIAGCQAYVSTFCSAGERCGAGSASDCEATAMGS
                     GTNQIDCTNAIGVQPSMDQCLSDLETASCDAASAPKSCDHALLLSQ"
     gene            complement(1010..2005)
                     /locus_tag="VLJ38_17690"
     CDS             complement(1010..2005)
                     /locus_tag="VLJ38_17690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HSU41417.1"
                     /translation="MKPWEFEWRRASKQPPPEHGIKVKKAGTTWWGKQWLDALELVLR
                     GDAGRLARGRSYARTGRAHDLRVTGGSITAQVTGSRPAPYAVQIKLRALDEATWTRAL
                     AAMAGKAQFSAELLAGRMPEAIDEVFRTAGASLFPRERADLVTDCSCPDSGDPCKHVA
                     ATHYVLGEALDRDPFLLFELRGKTKDQVLAALRAARATNTLPVSSTRAKRRRTKAAPP
                     EHETTQAPPHAMPPRVTAETYDKPPSALPSLHFSFDAPATHGAMLKQLGAPAAWHGAQ
                     SLADALSPLLSAASEAARRIARSEPAAPEATATKAARGRSSSAPKQRRKRPSRDR"
     gene            complement(2002..>4339)
                     /locus_tag="VLJ38_17695"
     CDS             complement(2002..>4339)
                     /locus_tag="VLJ38_17695"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSU41418.1"
                     /translation="ELARWSEPALGARDRLRACFRLELPEPATNPFLLRFLLQSPDDP
                     SLIVPASEVWRTQAQSLERLGRAFRDPQETLLEALGRASRLFSPIAAALETARPESVE
                     LDPARAWSFLHEGAPLLAEAGFGVVLPSELTPRGRRRLRLRMRVGKTTKAAGAVASAG
                     LGLDELLTVDWQALIGEHSLSVRELAALAERKSPLVRFRGTWVVVDPDELAEIQRRLA
                     SGPSRLTLREALPAALAGEARTLGLTSEVTTAGPLSRLIARLTGASSTEFRPPKALHA
                     TLRPYQARGSAWLSTMASLGLGACLADDMGLGKTVQLIAFLLERLAKSPEDTRPMLLV
                     APTSVVGNWERELERFAPALRVKGHYGAGRARTPAELPRDATLLLTTYGCLRRDLELL
                     SATAWSVVALDEAQNVKNAASATARAARTLRADVRFALTGTPVENRLAELWSILEFAN
                     PGLLGPLETFRREYALPIERYANEDAAARLRRMVAPFILRRLKSDPAIVRDLPAKNEM
                     KVVCTLTREQATLYKALVDEELRRIGQSEGIERKGRVLALLTRTKQICNHPAQYLGEK
                     GPLPARSGKLARATEMLEEALSAGDKALVFTQFREMGEHLTSYFSSALGVEVSFLHGG
                     TPKAARDRMVRRFQDEPRGPRIFVLSLKAGGTGLNLTAASHVFHYDRWWNPAVEDQAT
                     DRAYRIGQTRAVQVHKLVCAGTVEEKIDRLLEQKRALAAKVVSAGEQWITELGTGELR
                     ELFALSDGAVASDDEDEAHGRTGVRNAKTAARAREVRP"
BASE COUNT          661 a         1406 c         1554 g          718 t
ORIGIN      
        1 cgatcttcgc gagtgctgcc tcgacgtcca tcaagtgacc gcgatcgcgc tccgcgcggc
       61 cgatggcctg atgctgttcc aggctcgact ccgcttcatc catctcgtcc ccgacgctcg
      121 cgtccgtctc gcgcaggggg gacagcgtgg agacgtcggc ttgcaggcgt gctcgttcgg
      181 cgaccaagcg cgtccggagc tcggcaattt gtttggcggt cagtgacatg atgaattctc
      241 ctcagcttgg ggcgagcccc cgtcaagtaa cacgcgttgc tgggagcgcg ccgttcgctc
      301 tacggagcgc tgcccgcacg caacacgggg ccgcgaaggc ggctggcaca aacgtgacaa
      361 aagctctcac tagcggctcg acacgccgaa aagcggtcga aacgagcgac ggctgagcta
      421 gactcgcgag ctcttggctg cctcacgggt tgcagaggag aaggtcagat gggcttagca
      481 ggcttggctt ggagagtgct tggactgagt cagggtcgtt gggtgcaagg cgtgccgctc
      541 gtgctttgcg cgttcgtcgt ggggtgccat ggcggcgacg acgatgacga caaagcgccg
      601 acgtgttcgg tgcccgcgga cgcgcgtggc agtgacgcct gtcacgcctg gcaacaggcg
      661 atttgcgact acgccgctaa atgcgggacg ctcgcgcagt gcgattgcat cgcgcaagcg
      721 cgcgcgatca cctgcgcttc cgacgacgat gcgacgcgct gtacgcaagc attggcgagt
      781 gccgcctgca cggcaacgag cgatctttcc gcttgcgatt tggtcgcgat ggccgatccg
      841 gctccggcta tcgctggctg ccaggcgtac gtctccacgt tttgcagcgc gggcgagcgg
      901 tgcggcgccg gcagcgcgag cgactgtgag gcaacggcga tgggcagcgg gacgaaccag
      961 atcgattgca cgaacgcgat cggcgtgcag ccgagcatgg accagtgcct cagcgatctc
     1021 gagacggcct cttgcgacgc tgcttcggcg ccgaagagct gcgaccacgc gctgcttttg
     1081 tcgcagtagc ttcgggtgcc gccggctcgc tccgcgcgat gcggcgcgcg gcttcggagg
     1141 cggcggaaag caacggactg agcgcgtcgg cgaggctttg cgcgccgtgc catgctgccg
     1201 gcgcgccgag ctgtttcagc atggcgccgt gcgtcgctgg tgcgtcgaag gagaaatgga
     1261 gggagggcag ggcactcggg ggcttgtcgt aggtctcggc ggtaacacgc ggcggcatcg
     1321 cgtggggagg tgcctgcgtc gtttcgtgct ccggcggggc ggctttggtc cgccgccgct
     1381 tcgcccgcgt tgacgaaacc ggcagcgtgt tcgtggcgcg tgcggcgcgc agggcggcga
     1441 gcacttggtc tttcgtcttg ccacggagct cgaacaacag aaacgggtcg cggtcgagcg
     1501 cttcgccgag gacgtagtgc gtggcagcga cgtgcttgca cggatcgccc gagtccggac
     1561 acgagcagtc ggtgacgaga tccgctcgct cgcgcgggaa caggctcgcg cctgccgtcc
     1621 gaaacacctc gtcgatcgcc tccggcatgc gcccggcgag gagctcggcg gaaaactggg
     1681 ccttgccggc catggcggcg agcgcgcgcg tccaggtcgc ctcgtcgagc gcgcggagct
     1741 tgatctgcac ggcgtacggc gcgggacgcg agcccgtgac ttgcgccgtg atcgagccgc
     1801 ccgtgacccg cagatcgtgg gcgcgtccgg tgcgggcgta gctccggccg cgcgccagtc
     1861 gaccggcgtc accgcgcagg accagctcga gcgcgtcgag ccattgcttg ccccaccacg
     1921 tggttccggc ctttttgacc ttgatcccgt gctcgggcgg cggctgtttg gacgcgcggc
     1981 gccactcgaa ttcccagggc ttcatggccg cacctcgcga gcccgcgcgg cggttttcgc
     2041 gttgcggaca ccggttcggc cgtgcgcctc gtcctcgtcg tcggaggcga cggcgccgtc
     2101 cgaaagcgca aagagctcgc ggagctcgcc ggtaccaagc tcggtgatcc attgttcgcc
     2161 ggcggaaacg accttggccg cgagcgcgcg cttttgctcg agcaagcgat cgatcttctc
     2221 ttcgacggtc cccgcgcaca cgagtttgtg aacctgtacg gcgcgcgttt ggccgatgcg
     2281 gtacgcgcga tcggtcgctt gatcttcgac ggccgggttc caccagcgat cataatgaaa
     2341 cacgtggctc gcggccgtga ggttcaagcc ggtgccgccc gccttgagcg agagcacgaa
     2401 gatgcgcggc ccgcgtggtt cgtcctgaaa gcgccgcacc atgcgatcgc gtgcggcctt
     2461 cggcgtgccg ccgtgcaaga acgagacttc gacgccgagc gccgagctga aataggacgt
     2521 gaggtgctcg cccatttcgc gaaattgggt gaaaacgagc gctttgtcgc cggcgctcag
     2581 cgcttcctcg agcatttccg tcgcgcgggc gagcttgccg gagcgcgcgg ggagtggccc
     2641 cttctcgccg aggtattgcg cggggtggtt gcagatttgc ttggtgcgcg tcaaaagcgc
     2701 gagcacacga cccttgcgtt cgatgccttc gctctggccg atgcggcgga gctcttcgtc
     2761 gaccagggct ttgtagagcg tcgcctgttc acgcgtgagg gtgcagacga ccttcatttc
     2821 gttcttggcc ggcaagtcgc gcacgatcgc gggatcgctc ttgagccggc gtaaaatgaa
     2881 gggcgcgacc atgcggcgca gacgagccgc cgcgtcctcg ttggcgtaac gctcgatggg
     2941 cagcgcgtac tcgcgccgaa atgtctcgag cggaccgagc aggcccggat tggcgaattc
     3001 gaggatcgac cagagctcag cgagccggtt ttcgaccggg gtgcccgtga gcgcaaaacg
     3061 cacgtccgcg cgcagggttc gggcggcgcg ggccgtcgcc gaggcggcgt tcttcacgtt
     3121 ctgcgcttcg tcgagcgcga cgaccgacca cgctgtcgca ctcaggagct cgaggtcgcg
     3181 gcgcaaacag ccgtacgtcg tgagcaggag cgtggcgtcg cgcgggagct cggccggcgt
     3241 gcgcgcgcgg cccgcgccat agtgcccctt cacgcgcagc gccggcgcaa agcgctcgag
     3301 ctcgcgttcc caattgccga cgaccgaagt cggcgcgacg agcaacatcg ggcgcgtgtc
     3361 ctcgggcgat tttgcgaggc gctcgagcaa gaacgcgatg agctggaccg ttttgccgag
     3421 ccccatgtcg tcggcgagac aagcgccgag gccgagcgac gccatggtcg agagccaagc
     3481 ggaacctcgc gcttgatagg gacggagcgt cgcgtgcagc gccttcggcg gacgaaactc
     3541 cgtcgagctc gcgcccgtga ggcgcgcgat gagtcggctc agcggccccg cagtcgtgac
     3601 ctcgctcgtc aggcccaaag tacgagcttc accggcgagc gccgcaggga gagcttcacg
     3661 caaggtcagg cgcgaggggc cgctcgcgag tcgtcgctgg atttccgcga gctcgtcggg
     3721 gtccacgacc acccaggttc cgcgaaagcg cacgagcggg gatttgcgct cggcgagcgc
     3781 cgcgagctcg cgcacgctga gcgagtgttc gccgatgagc gcttgccaat ccaccgtcag
     3841 tagctcatcg aggccgagcc ccgcgctcgc gacggcgccg gcggctttcg tggtctttcc
     3901 aacgcgcatc cgcaggcgca ggcgacgtcg tccgcgtggt gtgagctcgc tcggcaagac
     3961 gacgccgaaa cccgcctccg cgagcaacgg cgcgccctcg tgcagaaagc tccacgcgcg
     4021 agcggggtcg agctcgacgg actcggggcg cgccgtttcg agtgctgccg cgatcgggga
     4081 aaacaggcgg ctcgccctgc cgagcgcttc gagcagcgtc tcttgcgggt cgcggaaggc
     4141 gcggccgagt ctttcgaggc tctgcgcctg cgtgcgccac acctcgctcg cgggcacgat
     4201 caggctcgga tcgtccggcg attggagcag aaagcgcagc agaaacgggt tcgtcgcagg
     4261 ctcgggcaat tcgaggcgaa agcaggctcg cagccgatcc cgggcgccga gcgcgggctc
     4321 gctccagcgc gcgagctcg
//
LOCUS       DATIML010001024         2204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3393183, whole genome shotgun sequence.
ACCESSION   DATIML010001024 DATIML010000000
VERSION     DATIML010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3393183"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            258..1463
                     /locus_tag="VLJ38_17700"
     CDS             258..1463
                     /locus_tag="VLJ38_17700"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HSU41419.1"
                     /translation="MLRRILIATAALALVGAAEPQAEVPPPIDLSRAHAEGSHLVAPA
                     GHGELAELTLDPALQHDAERLLDEAHPNAGAVVAVDAKNGRILAWAERRHLGRGPSVI
                     TTPHAPAASVFKLVTTATLFEKTDIAPSERVCIAGGMRSIERRHLDPPRDGEITCGPF
                     FQALGHSRNAVYAQLATHRLMRADLVEIAERIGFNGRVPFDYKAAVGTLDVPFEDLEF
                     ARTAAGFRGSTLTPLGGAYLAAVIATGGLAPRLRIVARAENYEPSPELESEGRVLRAT
                     TAQRLERMMEVTVASGTARSAFHDELGHPLLGNVQVAGKTGTLHPSEAQSEGVASWFL
                     GFAPARSPAIVVSVLLENGSVWRRKAVEVARDVLRSYFVARGVAGIRAPDFGRPEAEL
                     GAGPSASRD"
     gene            complement(1488..>2204)
                     /locus_tag="VLJ38_17705"
     CDS             complement(1488..>2204)
                     /locus_tag="VLJ38_17705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41420.1"
                     /translation="ERAVSDEEKNPKPPELSDEQKAADKEMLKPLKPKEKKQRMKELN
                     EDRQRVAVVKALVGRNKYILSRVHYRYDDKTLEQDPKFVAKSDGLDGGTALPKGEKRE
                     ASQAVTSDKNRLQTRFNNFHNWKPVIHCAAPDRWKWGKSPPDYKGLRKIWIAEDLTRK
                     SRTQINAAKMLKTDLPEYGLGPAATVVVDAGADASDGGTEPTKKSGCGIGNDHSARSG
                     AWLMLAASLLGFAARRRSRS"
BASE COUNT          325 a          779 c          714 g          386 t
ORIGIN      
        1 gtcgccgaca cctcgatgcc gcgacagcgt agggagcgcg tcccccagcg cgcggtcact
       61 cggaagtcag tcctcgcccg cagacctacc tgccgtctcg tggccgcttt catgtagcga
      121 atggtaggag ttagacctac atttagcaag atccggccgg gcggccctga gaatatcgcg
      181 gcaagcactg gattctactc aattattccg tgagcctgga acttggcact gttgctcggc
      241 ggcgcctaat tatcggcatg ctccggcgga tcctcattgc gacggctgcg ctcgccctcg
      301 tgggggccgc agaaccgcaa gccgaggtgc cgcccccgat cgacctttcg cgggcgcacg
      361 ccgaaggttc gcacctggtc gcgcccgcag gacacggcga gctggccgag ctcacgctcg
      421 atccggcgct ccagcacgac gccgaacgcc tgctcgacga agcgcacccg aacgccggcg
      481 ccgtggtcgc tgtcgacgca aagaacggcc gcatcctcgc ctgggcggag cgccgccatc
      541 tgggacgcgg tccttcggtc atcacgacac cgcacgcgcc ggcagcgagc gtcttcaagc
      601 tcgtcacgac cgccaccttg ttcgagaaga cggacatcgc gccctccgaa cgcgtctgca
      661 tcgcgggcgg catgcgcagc atcgaacgcc gccatttgga tccaccgcgc gacggagaga
      721 tcacctgtgg gcctttcttt caggcgctcg gtcacagtcg caacgccgtg tacgcgcagc
      781 tcgccacgca ccgcttgatg cgcgccgacc tggtcgaaat cgcggaacgc atcggcttca
      841 acggccgcgt ccccttcgac tacaaggcgg ccgtcggcac gctcgacgtg cccttcgaag
      901 acctcgaatt cgcacgcacg gccgcggggt ttcgcggcag cacgctcacc ccgctcggcg
      961 gtgcttatct cgcggcggtc atcgcgaccg gcggcctcgc tccacgcttg cgcatcgtcg
     1021 cgcgcgccga aaattacgag ccgtcgcccg agctcgagag cgaaggccgc gtgctgcgcg
     1081 ccacgaccgc gcagcgcctc gaacgcatga tggaagtcac cgtggcgagc ggcacggcgc
     1141 gctccgcctt ccacgacgag ctcggccatc cgttgctcgg caacgtgcaa gtcgccggca
     1201 agacgggcac cttgcacccg agcgaagcgc agagtgaagg agtcgcgagc tggttcctcg
     1261 gctttgctcc agctcgctcg ccggccatcg tggtcagcgt gctgctcgag aacggcagcg
     1321 tttggcgacg caaggcggtc gaagtggcgc gcgacgtgct gcgctcctac ttcgtcgcgc
     1381 ggggcgtcgc tggcattcgc gcgccggact tcgggcggcc cgaggccgag ctcggcgccg
     1441 gcccgagcgc gtcacgcgac tgacggcacg ggacgaacgc cggcgcgtca gctgcgcgaa
     1501 cgccggcgcg ccgcgaaacc gagcagtgaa gcggcgagca tcagccacgc gcccgagcgg
     1561 gccgagtgat cgttaccgat gccgcagccg ctcttcttcg tcggctcggt gccgccgtcc
     1621 gacgcgtccg cgccggcatc gacgacgacc gtggcagcgg gaccgagccc gtactcgggc
     1681 aagtccgtct tgagcatctt agccgcgttg atctgcgtgc ggctcttgcg cgtgagatcc
     1741 tcggcgatcc agatcttgcg taggcccttg tagtcgggcg gcgacttgcc ccacttccag
     1801 cggtcgggtg ccgcgcaatg gatcaccggc ttccagttgt ggaagttgtt gaagcgcgtc
     1861 tgcagccgat tcttgtcgct cgtgacggcc tgcgacgcct cgcgcttttc gcccttgggc
     1921 agcgccgtgc cgccgtcgag accgtcgctc ttggcgacga acttcgggtc ttgctcgagc
     1981 gtcttgtcgt cgtagcggta gtggacgcgc gacaggatgt acttattgcg cccgacgagc
     2041 gccttcacga ccgccacgcg ctggcgatcc tcgttgagct ccttcatccg ctgcttcttt
     2101 tctttgggct tgagcggctt gagcatctcc ttgtcggccg ccttctgctc gtcgctgagc
     2161 tcgggcggct tcgggttctt ctcctcgtcc gaaacggcgc gctc
//
LOCUS       DATIML010001025         3034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3967169, whole genome shotgun sequence.
ACCESSION   DATIML010001025 DATIML010000000
VERSION     DATIML010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3034
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3967169"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VLJ38_17710"
     CDS             complement(<1..208)
                     /locus_tag="VLJ38_17710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41421.1"
                     /translation="MNNAYEWDIWRGVRKAVEEHGGTVVCFAGSGLGDPDPEHRARST
                     VFELVHAWNAEALLCLTSVISPHAG"
     gene            complement(305..724)
                     /locus_tag="VLJ38_17715"
     CDS             complement(305..724)
                     /locus_tag="VLJ38_17715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSU41422.1"
                     /translation="MTKAVSPEEAQALMAEGQTYVDVRSEPEFEAGHPAGAVNVPISN
                     MGAGGLEPNPDFMAVMQRIFPKDAKLVIGCKTGGRSRRAATLLTSAGYTSIADMVAGF
                     SGSRDAFGRPSPGWSDKGLPVETGAPEGRSYPDMKKR"
     gene            833..2482
                     /locus_tag="VLJ38_17720"
     CDS             833..2482
                     /locus_tag="VLJ38_17720"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HSU41423.1"
                     /translation="MSDLASGVVRLVPLGGLGRIGMNCLAIEQADGIVVIDCGIGFAE
                     DSLGIDVLHPDFSWLVERADRVRGLFLTHGHEDHVGALPYLLAELDVPIWGPAHALAV
                     ARRRLLEHDFAPEDLDLRVAEVGRSHAVGSFDIEPVRVTHSIVEASALRIVTAGGTLL
                     HTGDFNLDPEPPDGEPTDEARLASIGDDGVALMLSDSTNSDIPERFGSERSVGETVEA
                     LVTSAPGAVVIAMFASNIQRLITFGAIAQRLGRKMLVLGRSLESQVQIATELRHLRWP
                     SDLLIDAERAKSYPRDRLMVLAGGTQAEPNSALRRLSLGVHPAFALERGDTVILSSRA
                     IPGNERVVVEMQDDLLRQGVALKNRITDPGVHTSGHAAQFEQMRMLELVRPRCFLPVH
                     GTLGHLTRHARLAAEFGISSVKVVEDGMPVLCDGDALATEARVQHGRIAVAAGGERLD
                     EATLKERAELARSGVVVLALTLDRDHRGLAPPRVLARGVPALTAAATRTLEREAARAL
                     EVFREGRGLALEEFVRRAVRRKVEEIAGTRTLVEVLATELD"
     gene            complement(2533..>3034)
                     /locus_tag="VLJ38_17725"
     CDS             complement(2533..>3034)
                     /locus_tag="VLJ38_17725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41424.1"
                     /translation="GAVALVAALSLGDIGTLPVRVGDLGIAIERGNELDRIGWCDLKR
                     VYVDKGKLMLEAKESTSSITLAAHPKAVARLLAEGTQRVPEAMDVKRSAIEDLPTPRD
                     DDGELLTVDAPQVAGRSCRASGKTIAFERDARLCPQCGEVYLKDRVPKKCLTCGADLG
                     ERALEA"
BASE COUNT          447 a         1042 c         1034 g          511 t
ORIGIN      
        1 taccggcgtg cggactgatg acgctcgtca ggcacagcag ggcctcggca ttccacgcgt
       61 gaacgagctc gaagacagtg ctccgcgcgc gatgctccgg atctggatca ccgaggcccg
      121 agccggcgaa acagaccacc gtgccgccgt gctcttcgac ggctttgcgc acgccccgcc
      181 agatgtccca ctcgtacgcg ttgttcatgt acgcggcgag gaatgcgatg cgcggccccc
      241 gcctcgcctc cgacgctgaa cgtgaaggcg cggcagctaa gctcatccga cgagcataac
      301 gcgtctatcg tttcttcatg tccgggtagc tgcgcccttc gggcgctccc gtctcgacgg
      361 gtagtccttt gtccgaccac ccggggctcg gtcgaccgaa agcgtcgcgc gagcccgaga
      421 agcccgcgac catgtcggcg atgctcgtat aaccagcaga agtgagcagt gttgccgcgc
      481 gccgcgaacg tcctccggtc ttgcatccga tgacgagctt cgcgtccttg gggaaaatcc
      541 gctgcatgac ggccatgaag tccgggtttg gttcgagccc gcccgcgccc atgttcgaga
      601 tgggcacgtt gaccgcccct gccggatgac ccgcctcgaa ttcgggctcg gagcgtacgt
      661 cgacgtacgt ctgaccttca gccatcaggg cctgcgcttc ttccggactc accgctttcg
      721 tcatgaccca ggagagggta ccgacgagat gccgcaaggg caagcggtgg tcagtcggcc
      781 ggtcggatcg cgccggcgct cgcgccagcc cgtaaaatga gatgtttgcg ccgtgagtga
      841 tcttgcgtcc ggcgtcgtgc ggctcgtgcc tttgggcggt ctggggcgga tcgggatgaa
      901 ctgtcttgcg atcgagcagg ccgacggcat cgtggtcatc gactgcggca tcggctttgc
      961 cgaagacagc ctcgggatcg acgtgctgca tcccgacttc agctggctcg tcgagcgcgc
     1021 cgatcgggtg cggggcctgt ttctcacgca cgggcacgag gatcacgtcg gtgcgctgcc
     1081 gtacctgctg gccgagctcg acgtgccgat ttggggtccc gcgcacgcgc tggctgtcgc
     1141 gcgccggcgc ttgctcgagc atgactttgc gcccgaggac ctcgatttgc gggtcgccga
     1201 ggtcggccgc agccacgccg tcggctcgtt cgatatcgag ccggtgcgcg tcacgcattc
     1261 catcgtcgaa gcttcggccc tgcgcatcgt gaccgccggc ggcaccctgc tgcacaccgg
     1321 ggacttcaac ctcgatcccg aaccgcccga cggcgagccg accgacgaag cgcggctcgc
     1381 gagcatcggc gacgacggtg tggcgctgat gctgagcgac agcacgaaca gcgacatccc
     1441 cgagcggttc ggttcggagc gcagcgtggg cgaaaccgtc gaggcgctcg tcacgagcgc
     1501 gcccggtgcc gtcgtgatcg ccatgttcgc gagcaacatc cagcggctca tcaccttcgg
     1561 tgccatcgcc caaaggctcg gccgcaaaat gctcgtgctg gggcgcagcc tcgagagcca
     1621 ggttcagatt gccacggagc tccggcacct gcgctggccg agcgatctgt taatcgacgc
     1681 cgagcgcgcg aagagctacc cgcgcgaccg gctcatggtg ctcgccggcg gcacgcaagc
     1741 ggagccgaac tcggcgttgc gacggctgtc tctcggcgtg catcccgcgt tcgcgctcga
     1801 gcgcggcgat accgtcatct tgtcgagccg cgcgatcccc ggcaacgagc gtgtcgtggt
     1861 cgagatgcag gacgacctcc tgcggcaggg ggtggctctc aagaatcgca tcaccgaccc
     1921 cggcgtccac acgagcggtc atgccgcgca gttcgagcag atgcgcatgc tcgagctcgt
     1981 gcggccacgc tgttttctgc cggtgcacgg cacgctcgga catttgacgc gccacgcgcg
     2041 tctggccgcc gagttcggga tttcgtcggt gaaggtcgtg gaggacggca tgcccgtgct
     2101 ctgtgacggc gacgcgctcg cgacggaggc gcgcgtccag cacggacgca tcgccgtcgc
     2161 ggccggcggc gagcgcctgg acgaagcgac cttgaaggag cgcgccgagc tcgcgcgcag
     2221 tggcgtcgtg gtcctggcgc tcacgctcga ccgcgaccat cgcggcttgg cgccgccgcg
     2281 cgttctcgcg cgcggcgtgc cggcgctgac ggccgcggcc acccggacgc tcgaacgcga
     2341 agcggcgcgc gccctcgagg tctttcgcga aggccgcggc ctcgcgctcg aggagttcgt
     2401 gcgccgggcc gtgcgccgta aggtggagga aattgcgggc acgcggacgc tcgtagaagt
     2461 gctcgcgacc gagctcgact gacccgcatc cgaattcttg ccgtgcgctc cgcggctcgc
     2521 ggagtaaagg agttacgctt cgagcgcgcg ttcgccgagg tccgcgccgc aggtgaggca
     2581 cttcttcggc acgcggtctt tcaagtagac ctcgccgcat tgcgggcaca gccgagcgtc
     2641 gcgctcgaag gcgatcgttt tcccgctggc gcggcagctg cgcccggcga cctgcggcgc
     2701 gtcgaccgtg aggagctcgc cgtcgtcgtc gcgcggcgtc ggcaaatcct cgatcgcgct
     2761 ccgcttcacg tccatcgctt cggggacgcg ctgcgtgccc tccgccagca agcgcgccac
     2821 ggccttcggg tgcgcggcga gcgtgatcga gctcgtgctc tccttggcct cgagcatgag
     2881 cttgcccttg tcgacgtaaa cgcgtttgag gtcgcaccaa ccgatgcgat cgagctcgtt
     2941 gccgcgctcg atcgcgatgc cgagatcacc cacgcgtacc ggcagcgttc cgatgtcgcc
     3001 gagcgagagc gccgcgacga gcgccaccgc gccg
//
LOCUS       DATIML010001026         2575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5420729, whole genome shotgun sequence.
ACCESSION   DATIML010001026 DATIML010000000
VERSION     DATIML010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5420729"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2575
                     /locus_tag="VLJ38_17730"
     CDS             <1..>2575
                     /locus_tag="VLJ38_17730"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU41425.1"
                     /translation="AELGRELFARGENERAIDELKAVVKAAAGDNRVLAPALRDLGMA
                     QARAGQRKEAIATLEQALAAAGAAAGVRREVYQAVADAYRAEDRLPELVARLEKKGAR
                     DADELRLLASLYEESGRIDKALTTYRQALAREPADIATRLKVVSLLEAQGQLEQAVHE
                     YEALIQAAPRNPDYVFRLVNALLQRGDRQRALDELRKLEARSGSDEDTLAALVDFYER
                     VGEKERSLALLERLAAAGGRDPQHLVELGARYWATGDKARAVATWQRIRVLTADRVQG
                     LLAEGDVLLDHDLVKEGLEALSEATKLEPGQTRAQKAYALGLERAAGAQTSPDARRIY
                     LDEALALWEKLLKGERTSADLAREARQHVVTLWGLRGQSAQRMNGLAKRFAATPPDLD
                     AGRLLAEAELRARSFGAAERTLRRISELAPADVESLKRLETVLVQQRKLADAIGVLGR
                     LVTLEPKHAREAYQRMAEYSAELYQDDDAVRYAARAVELAPDDAEGHAKLGRMYRRRQ
                     ENERAIGELRQAIQKNDRAFAVHLELAELLIDKGQLDEADLLLRRVIRAAPDEELVSR
                     AARLSVQLNLGRGTLESLEREILPLALANPERPLFRRLLVEIYGAIAYPLVHRVRTGS
                     AAEAEEARRALAKLGDRAVKPLLDALADERASQQQVAITLLSHVASKSAGPSLVAYAK
                     SNAETSLRARAMIAAGTLRDPSLLPKFEAVLFADGRGSADDSDPVAVAAAWAVARLGS
                     RQARPLLVRLLGTEAPSLRALGAVGLGILHDTSATSELMRLAGSADAGNLARGAAARA
                     LGMLGARSEIEAITALARATSPELRKSALLALAELRAPDAANAFADGLVDPDPELRAV
                     AA"
BASE COUNT          411 a          927 c          908 g          329 t
ORIGIN      
        1 gcgccgagct cgggcgcgag ctctttgcgc ggggtgaaaa cgagcgcgcc atcgacgagc
       61 tcaaagccgt ggtcaaagcg gcggcgggcg acaaccgcgt gctcgcgccg gccctgcgcg
      121 acctcgggat ggcccaggcg cgcgccgggc aacgcaaaga agccatcgcg acgctcgagc
      181 aggcgctcgc tgcggcgggc gcggctgcgg gcgtgcggcg cgaagtttac caggcagtcg
      241 ccgacgcgta tcgcgccgag gatcggttac cggagctcgt cgctcggctc gagaagaaag
      301 gcgcgcgcga cgccgacgaa ctgcgcctgc tcgcctcgct ctacgaagag agcggccgca
      361 tcgacaaagc gctcacgacc taccggcaag cactcgcgcg cgagcccgcg gacatagcga
      421 cgcggctcaa ggtcgtgagc ttgctcgaag cccaaggtca gctcgagcaa gccgtgcacg
      481 agtacgaggc gctgattcag gccgcgccgc gcaatcccga ctacgtcttt cgtctcgtca
      541 atgcgctctt gcagcgcggg gaccggcagc gcgcgctcga cgagctccgc aagctcgaag
      601 cgcgctcggg cagcgacgag gacacgctcg cggccctcgt cgatttttac gagcgcgtgg
      661 gcgaaaagga gcgcagcctc gcgctgctcg aacggctcgc ggcggcaggt ggccgcgatc
      721 cgcagcacct ggtcgagctc ggcgcgcgct attgggccac cggggacaag gcacgcgccg
      781 tcgcgacgtg gcagcgcatc cgcgtgctca cggccgaccg cgtccaaggc ttgctggccg
      841 aaggcgacgt gctgctcgat cacgatctcg tcaaagaagg cctcgaagcc ctgagcgagg
      901 cgaccaagct cgagcccggt cagacgcgcg cgcagaaggc gtacgcgctc ggactcgaac
      961 gggccgcggg cgcgcagaca tcccccgacg cgcggcgcat ctacttggac gaagcgctcg
     1021 cgctctggga aaaactgctg aagggcgagc gtacgagcgc cgacctcgcg cgcgaggcgc
     1081 gccagcacgt ggtgacgctc tggggcctgc gcggccagag cgcgcagcgt atgaacgggc
     1141 tcgccaagcg cttcgccgcg acaccgcccg atctcgacgc cggacgcttg ctggcggaag
     1201 ccgagctccg cgcgcgcagc tttggcgccg ccgagcgcac gctgcgccgc atcagcgagc
     1261 tcgcgccggc cgacgtcgag tcgctcaagc ggctcgaaac ggtgctcgtg caacagcgca
     1321 agctcgccga cgccatcggc gtgctcgggc ggctcgtgac gctcgagccg aagcacgcgc
     1381 gcgaagcgta ccagcgcatg gccgagtatt cggccgagct ctatcaggac gacgacgccg
     1441 tgcgctacgc ggcgcgcgcc gtcgagctcg cgcccgacga cgccgaaggg cacgccaagc
     1501 tcggccgcat gtaccgccgg cgccaggaaa acgagcgcgc catcggcgag ctgcgccagg
     1561 cgatccagaa gaacgatcgc gccttcgccg tacatctcga gctcgccgag ctcttgatcg
     1621 acaagggaca gctcgacgaa gccgatttgc tgctccggcg cgtgatccgc gcggcgcccg
     1681 acgaggagct cgtctcgcgc gccgcgcggc tcagtgtgca gttgaacctc ggccgcggca
     1741 cgctcgagtc gctcgagcgc gaaatcctgc cgctcgcgct cgccaacccc gagcgaccgc
     1801 tgttccggcg cctgctcgtc gagatttacg gcgccatcgc ttacccgctc gtgcaccgcg
     1861 tgcgcaccgg ctcagccgcc gaagccgaag aagcccgccg cgccctggcg aagctcggcg
     1921 atcgcgccgt gaagccgctg ctcgacgccc tcgccgacga acgcgcgagc cagcagcagg
     1981 tcgcgatcac gctcctttca cacgtagcga gcaagagcgc gggaccgtcg ctcgtcgcgt
     2041 atgccaagag caacgccgag acgagcctgc gcgcgcgcgc gatgatcgcg gccggcacgc
     2101 tgcgcgatcc gagcctgctc cccaaattcg aggccgtgct cttcgcggac ggccgcggtt
     2161 cggcggacga ttcggatccc gtcgccgtcg cggcggcctg ggccgtcgcc cgcttgggct
     2221 cgcggcaggc gcgaccgctg ctagtgcgat tgctcggcac ggaggcgccg agcctgcgcg
     2281 ctctcggagc ggtcggtctc gggattttgc acgacacgag cgcgacgtcc gagctgatgc
     2341 gtctggccgg ttcggcggac gccggcaacc tcgcgcgtgg agcggcggcg cgcgctctcg
     2401 gtatgctggg cgctcgcagt gaaatcgaag cgatcacggc actggcgcgc gcgacgagcc
     2461 cggaattgcg caagagcgcg ctgctcgcgc tcgccgagct acgggcgccc gacgccgcga
     2521 atgccttcgc cgacggcctc gtcgatccgg acccggagct ccgggccgtg gccgc
//
LOCUS       DATIML010001027         3900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2527823, whole genome shotgun sequence.
ACCESSION   DATIML010001027 DATIML010000000
VERSION     DATIML010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3900
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2527823"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VLJ38_17735"
     CDS             <1..234
                     /locus_tag="VLJ38_17735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41426.1"
                     /translation="ICVDDWKALAPRRAGLPVLQSHGRSDPVLPYAGAEWLRDMLEGS
                     RLSVQFIASNGGHGIPSSVLERLGPFVMQAMSH"
     gene            255..2705
                     /locus_tag="VLJ38_17740"
     CDS             255..2705
                     /locus_tag="VLJ38_17740"
                     /inference="COORDINATES: protein motif:HMM:NF024642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding domain-containing protein"
                     /protein_id="HSU41427.1"
                     /translation="MPEPATLASDPELERIVSEEQACLERVERNLGARPTTRNRRTDA
                     SDYDARLLDLRDQIAAARAEDLPPLVQEMERLQALATRLREIEEVTIDRRSPYFGRLV
                     LEENGKRREVLIGRATYLDTKSDVRIVDWRDAPVSRLYYRYDEGDEYDEVFGGREVTG
                     TVAVRRSLGITDAELRRIGAPQGTFLRGSKGGWRRIDQQASRLHGGAGTAIRAEQHRR
                     PGKLGLGNDSGEDKTLKEVTALIDRRQFELITRPDAGLVVIQGGAGSGKTTIGLHRLA
                     FLAFRDTRRFRPDKMLVIVFNDALVRYIAGVLPALGVSGVTTRTYGDWAARTRHGLYP
                     RLPSKYHEDTPSVVTRLKKHPALLGSVRDFCDARVKRVESELTTALAGEGEAGKQVLA
                     SLAAGAGKPLVQRFHALGALATTELSRALSTNGRVAIERISARAVADARDVPAAWAEL
                     LTDRGALRAALERSAPGAFTAGELERAHAWCALRCGEVMAELDTESGERRGRNLVDRE
                     DEEASRRSKKEDEDDVDLEIRAGIDGREIAERARLDVEDDTLLLLLHQALRGHLTRGG
                     TTREPIIYEHILVDEAQDLSPLELSVVLGTASKAKSVTLAGDVQQRMLMDNGFSDWNT
                     VLDELGFSHIEIEPLKLSYRSTHEILDFSRAVLGPLAAKDAPAATRHGAPVELFELGH
                     AGDAAAFLAEALRDLSVEEPTASIAIVARFPEQADVYFEALQRAEVRGVRRVAEQDFS
                     FKPGIDVTDVRQVKGLEFDYVVLVDVTDTSHPDDDEARHLLHIGATRAAHQLWVLTGG
                     KPSPLLPRELLERAGIPE"
     gene            complement(2788..3165)
                     /locus_tag="VLJ38_17745"
     CDS             complement(2788..3165)
                     /locus_tag="VLJ38_17745"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HSU41428.1"
                     /translation="MSGVTLDAGGLIALDRDHRRVIALLARAAELGARVTVPATALAQ
                     AMRQPAHQARLARLIRQPTTAVAPLDTADAIAVGALLAATRTSDIADAHVVICARRSR
                     ASIVTSDLRDLARLDPNAHLIRV"
     gene            complement(3162..3419)
                     /locus_tag="VLJ38_17750"
     CDS             complement(3162..3419)
                     /locus_tag="VLJ38_17750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HSU41429.1"
                     /translation="MKITVTLEEEQVETIRQLVAERKADSVSGFVKHAVRVSLADAIG
                     WGVMLKDALAETGGPLTREERAWADSVLGAVAKPKRRRRAA"
     gene            complement(3489..>3900)
                     /locus_tag="VLJ38_17755"
     CDS             complement(3489..>3900)
                     /locus_tag="VLJ38_17755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41430.1"
                     /translation="GSLGARHELDTVSAALGRTVERVRALCEDGQGGPALLTFMVTDG
                     ELLAASEGGRDLYWSSYKNRCSDRERCPSVSAECEAPTTTGHVNHFIVSSEPLQGENV
                     WQPFQPGEIVAVDRSMRIHRAHVDRRALPVLLTA"
BASE COUNT          646 a         1361 c         1301 g          592 t
ORIGIN      
        1 atctgcgtgg acgactggaa agcgcttgcg ccccggcgcg cgggcctgcc cgtactccag
       61 agtcacggcc gttccgatcc ggtcctgccg tacgccggcg ccgagtggct gcgcgatatg
      121 ctcgagggtt cgcggctttc cgtgcagttc atcgcgtcga acggcgggca tggcatcccg
      181 agcagcgtgc tcgaacggct cggtccgttc gtgatgcagg caatgtcgca ctgacgtgct
      241 acgcgaggcg acccatgccc gaaccggcca cactagcgag cgaccccgag ctcgagcgca
      301 tcgtcagcga ggagcaagcc tgcctcgagc gcgtcgaacg taacctcggg gcgcgcccca
      361 cgacgcgaaa tcgccgcacg gacgcgagtg actacgacgc ccgcctgctc gatttgcgcg
      421 atcaaatcgc cgccgcacgc gccgaggatc tgccgccgct cgtccaagaa atggagcgcc
      481 tgcaggcgct cgccacgcgc ctgcgcgaga tcgaagaagt cacgatcgac cgccggtcac
      541 cgtatttcgg ccggctcgtg ctggaagaga acggcaaacg gcgtgaggtg ttgatcggcc
      601 gcgcgacgta cctcgatacc aagagcgacg tgcgcatcgt cgattggcgc gacgcaccgg
      661 tgagtcgtct ctactaccgc tacgacgaag gcgacgagta cgacgaggtg ttcggcggcc
      721 gcgaagtgac cggcacggtc gcggtgcgac ggagcctcgg catcaccgac gcggagctcc
      781 gccgcatcgg cgcgccgcaa gggaccttcc tgcgcggctc gaaaggcggc tggcggcgca
      841 tcgaccagca ggcgagccgc ctgcacggcg gcgccgggac ggccatccgc gccgagcaac
      901 accgccgccc cggcaagctc ggcctgggca atgactcggg tgaagacaag acgctcaagg
      961 aagtgacggc gctcatcgat cgccggcaat tcgagctgat tacccgcccc gacgccgggc
     1021 tcgtcgtgat tcaaggcggc gccggcagcg gtaagaccac gatcggcttg catcggctgg
     1081 cattcctcgc gtttcgcgac acgcgccgct tccgcccgga caagatgctc gtcatcgtct
     1141 tcaacgacgc gctcgttcgt tacatcgccg gcgtcctacc cgcgctcggc gtctcgggcg
     1201 tcaccacgcg cacctacggc gattgggcgg ctcgcacgcg ccatggactc taccctcgcc
     1261 tgccctcgaa gtatcatgag gacacgccga gcgtcgtcac gcgcctcaag aagcacccgg
     1321 cgctgctcgg cagcgtgcgc gatttctgcg acgcgcgcgt aaaacgcgtc gaaagcgagc
     1381 tcacgacggc gctcgccggc gaaggcgaag caggcaagca agtgctcgcg tcgctcgccg
     1441 ccggcgcggg caagccgctc gtccagcgtt tccacgcgct cggcgcgctc gccacgacgg
     1501 agctcagccg cgcgctctcg accaacggtc gcgtcgcgat cgagcgcatt tcggcgcgtg
     1561 ccgtcgcgga cgcccgcgac gtgcccgcgg cgtgggccga gctcctcact gaccgcggcg
     1621 cgcttcgcgc ggcgctcgaa cgcagcgcgc cgggcgcctt cacggccggc gagctcgaac
     1681 gcgcacacgc ctggtgtgcg ctccgctgcg gcgaagtcat ggccgagctc gacacggagt
     1741 cgggcgaacg tcgtggccgc aacctcgtcg atcgcgagga cgaggaagcc tctcgccgca
     1801 gcaaaaagga ggacgaggac gacgtggatc tcgaaatccg tgccggcatc gacggccgcg
     1861 agatcgccga acgcgcgcga ctcgacgtcg aggacgacac gctgctgttg ctcttgcacc
     1921 aggccctgcg cggtcatctc acgcgcggcg gcaccacgcg cgagcccatc atctacgagc
     1981 acatcctggt cgacgaagct caggacttga gcccgctcga gctctccgtc gtgctcggca
     2041 cggccagcaa ggcgaagagc gtcacgctcg ccggcgacgt ccagcagcgc atgttgatgg
     2101 acaacggctt ttccgattgg aacaccgtgc tcgacgagct cggcttttcg cacatcgaga
     2161 tcgagccgct gaagctctcg taccgttcga cgcacgagat tctcgacttt tcgcgggcgg
     2221 ttttgggtcc cctcgcggcc aaggacgcgc cggccgcgac gcgtcacggc gcgcccgtcg
     2281 agctgttcga gctcggccac gcgggcgacg ccgcggcgtt tctcgccgaa gccttgcggg
     2341 acctgagcgt cgaggagccg acggcctcga tcgcgatcgt cgcgcgcttt cccgaacagg
     2401 ccgacgtgta cttcgaagcg ctccagcgcg ccgaggtgcg cggcgtgcgg cgcgtcgcgg
     2461 agcaagactt ctccttcaag ccgggcatcg acgtgacgga cgtccgccag gtcaaaggac
     2521 tcgagttcga ttatgtcgtg ttggtcgacg tgacggacac ttcgcacccc gacgacgacg
     2581 aagcgcggca tttgctgcac atcggcgcga cgcgcgcggc gcatcagttg tgggtgctga
     2641 ccgggggaaa gccgagtccg ctcttgccga gagagctcct ggagcgagcc ggcattccgg
     2701 aatgagccgc cggcgttcgt tacttacgcg acgcggctct aagtcttcag cccaaacgtg
     2761 cgccgacgaa acggcgcggg cacggcacta gacgcgaatg aggtgagcgt tcggatccag
     2821 ccgagcgaga tcccgtagat cactcgttac aatcgaggcg cgcgagcgcc gggcgcagat
     2881 gacgacgtga gcgtcagcga tatcggaggt gcgcgtcgcg gcgagcaggg ctccgaccgc
     2941 aatcgcgtca gccgtatcga gcggcgccac cgcggtcgtc ggctgccgaa tcagccgcgc
     3001 caagcgggct tggtgggccg gctgtcgcat tgcctgcgct agcgcagttg caggcaccgt
     3061 gacgcgcgca ccgagttcgg cggctcgagc gagcaatgca atgactcggc gatgatcccg
     3121 gtccagtgcg atgaggccgc ctgcgtccaa cgtgacgccg ctcacgcggc ccttcgcctg
     3181 cgcttcggct tggcaacggc gccgagcacg gagtcggccc aggctcgttc ttcacgtgtc
     3241 agcggacccc cagtttcagc aagtgcgtcc ttgagcatga ccccccagcc gatcgcgtcc
     3301 gcaagcgaca ccctgacggc gtgcttcacg aaaccggaga cgctgtccgc cttccgttca
     3361 gcgaccaact gccgaatggt ctcgacctgc tcctcttcga gcgtgacggt gatcttcact
     3421 gtcgccatac cgtccaccat accacgggcg tcaccgctct agcgcgtcgg ccggcggcgc
     3481 gggtcgagct aagccgtgag cagcacgggc aaggccctgc gatccacgtg agcccgatgg
     3541 atccgcatgc tgcgatcgac agcgacgatt tcgcctggct ggaagggttg ccagacgttt
     3601 tcaccctgga gcggctcgct cgagacgatg aagtggttca cgtgccccgt ggtcgttggc
     3661 gcttcgcact ccgcggacac gctcgggcag cgctcgcgat ccgagcagcg gttcttgtag
     3721 ctcgaccagt agaggtcgcg cccaccctcg gaggccgcca gcagctcacc gtccgtcacc
     3781 atgaacgtga ggagcgccgg gccgccctgc ccgtcttcgc agagcgcgcg cacgcgctcc
     3841 acggtgcgac cgagggcggc gctcaccgta tcgagctcgt ggcgcgcccc gagcgagccg
//
LOCUS       DATIML010001028         4798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2238641, whole genome shotgun sequence.
ACCESSION   DATIML010001028 DATIML010000000
VERSION     DATIML010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4798
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2238641"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..1997)
                     /locus_tag="VLJ38_17760"
     CDS             complement(210..1997)
                     /locus_tag="VLJ38_17760"
                     /inference="COORDINATES: protein motif:HMM:NF016362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HSU41431.1"
                     /translation="MTFTEAAAQVLRLVGKPLHYKEITDVAIEKNLLSHVGKSPEVTM
                     GARLAALVKKGDKENPLVRVKPGVFALRDWDTATIEKGLLDRTPALERLAAQLPSEPE
                     EGAAETSSPSLEEPVAEQAEAEAPSVLDPAERERAALAAHATEFFESEEDDDEPIFGR
                     EAEEASAEGAPAQPGGNRRRRRRRRGGRSGAEERVSGGDGLPSYTVSDAPADLPVLEA
                     DAGLRDQPRREAPRRDEARREEPRRDDSRRDEARRDEARRDEARRDEPRRDEPRRDEP
                     RRDDSRRDDPRRDDSRRDDSRRDDSRRDDSRRSSPEGAPPPRRGFESPRDGGTPLEEL
                     AGRGLADGLAELLGTFDRNRGPVALQTLVDAAERRGRFFGEQAVGQGILIAAARADNA
                     RALARGERPRFRVAGGRLGLTEWALDGELIRLERDIQQFAERYRDTARRAVLRVLQDL
                     PHRSLGELIVLVLEHVGFSNLVSVRRPGAHGAELHLSGKLRTPAGEIRTAVVVRRDGR
                     EIGRERVTELRGALHHYGPANAAWLITTGQVLSGAREEAAAPGASPLTVIDGLGLVRL
                     CEEHGVGVQRTMVPLFVPDLDLLDGIRVS"
     gene            2215..2568
                     /locus_tag="VLJ38_17765"
     CDS             2215..2568
                     /locus_tag="VLJ38_17765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41432.1"
                     /translation="MDADLMLAELTQVAESVGIEVRSRTLRHLPSLGGLCRMPGRTLV
                     LLSSRATPHERCTVLAQALAELGHSAHPGLGTAARALVERHGRPAPSNTPTEHTTPKK
                     GPGLAGIGERGRRRM"
     gene            2589..3707
                     /locus_tag="VLJ38_17770"
     CDS             2589..3707
                     /locus_tag="VLJ38_17770"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HSU41433.1"
                     /translation="MHVSPRELVPLAPLTTLGVGGQARFFVDASEEASVVGALRWARE
                     RGLATRVLGGGSNVVAGDDGFDGLVLRLGMRGRRFTTAGNDVLLQAQAGEPWDELVAE
                     TVTRGAQGLECLSGIPGLVGATPIQNVGAYGQEVAETIVSVRALDRETLETREFAAAA
                     CHFAYRDSWFKSEVPERFVVLAVTFRLSAGAPGAVRYAELEQRLRSDGIAPEAAPLGR
                     VRETVLALRRAKSMLLDPSDENGRSCGSFFVNPSVSRERADAIAALVKDAKMPRFMQP
                     DGRVKLAAGWLIERSGFAKGTRRGSVGLSTKHALALVAHEGATASAVLDFAHEIQSAV
                     HARFGVELVLEPVVWGGQSGRAAAGSATAGSAPPATLP"
     gene            complement(3641..>4798)
                     /locus_tag="VLJ38_17775"
     CDS             complement(3641..>4798)
                     /locus_tag="VLJ38_17775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HSU41434.1"
                     /translation="GDLGTIKSANGELTVEDTVKPKTGLFVHRGRVARGGLRVGETVE
                     LAVDVPRRERIRRNHSATHLLHWALRQVLGPHAQQKGSLVGPERLRFDFTHPRALTPE
                     ELARIEELVNERTLRNSPVRTEVLLMEEARKRGATMIFEEKYGDVVRMLSMAESTELC
                     GGTHARATGDIGLFKIVSEQGVAAGVRRILAVTGEGALAHLREVEASLAEASRAAKTT
                     PVMLVERIQKLVLHERALEKQIEELEKKLASGGGGGVESLLAKARDVGGVRVLGVRTS
                     VNDRGALRELAEQLRDKLGDSIVLVGSEADGKAQLVLTVSKALTTRYRAGDLIRGVAE
                     LVGGSGGGRPDMAQAGGTETARLDEAIASIYGSVAGGAEPAVAEPAAARPD"
BASE COUNT          701 a         1707 c         1642 g          748 t
ORIGIN      
        1 cggaaagcgc gaggcgggcg gcgggcggcc gcaactcacg agcgccgccg ctacgcagaa
       61 ggaccctgcg cgagcggtgc gccgccgcga taacacgggc aatacgccaa tgttcgagac
      121 cactttggat gctcgcgccg acgtgatctg ttcttccaag actcacacgc ctcgtcgggc
      181 tggggctaac gccccagcca gccgttcgct caagaaacgc ggatgccgtc gagcaagtcg
      241 aggtccggca cgaagagcgg caccatcgtg cgctgcactc cgacaccgtg ctcctcacac
      301 aaacgcacga ggccgaggcc gtcgatcacc gtgagcggtg acgcgccggg cgcggctgct
      361 tcctcgcgcg ctccgctcaa gacctgaccg gtcgtgatga gccaagctgc gttcgcgggg
      421 ccgtaatgat gcagcgcacc gcggagctcg gtgacccgct cgcgaccgat ctcgcgaccg
      481 tcacgccgga ctacgacagc cgtgcgaatt tcgcccgcgg gggtgcggag cttgccggaa
      541 aggtgcagct cggcgccgtg ggcgccgggg cggcgcaccg agacgagatt cgagaagccg
      601 acgtgctcga gcacgagcac gatgagctcg ccgagagagc ggtgcggcag atcctgcagc
      661 acgcgcagca cggcgcgccg cgccgtgtca cggtagcgct cggcgaactg ctggatgtcg
      721 cgctcgaggc gtatcagctc gccgtcgagc gcccactcgg tcaggccgag ccgaccgccc
      781 gcgacgcgga agcgcggacg ttccccgcgc gcgagtgccc gggcgttgtc ggcgcgcgcc
      841 gcggcgatca aaatgccctg acctacggcc tgttcgccga agaaacggcc tctccgttca
      901 gcggcgtcca cgagagtctg gagcgccacc ggaccgcgat tgcgatcgaa ggtgccgagg
      961 agctcggcca agccgtccgc gagaccacga cccgcgagct cttcgagcgg ggtgccccca
     1021 tcacggggcg attcgaagcc acgccgcggc ggaggagcgc cttccggcga tgaacgccgc
     1081 gaatcgtcgc gtcgcgagtc gtcgcgtcgc gagtcgtcgc gtcgcgaatc gtcacgtcgc
     1141 gggtcgtcgc gtcgcgagtc gtcacgccgc ggttcgtcgc gtcgcggttc gtcacgtcgc
     1201 ggttcgtcgc gtcgtgcttc gtcgcgtcgt gcttcgtcgc gtcgcgcttc gtcgcgtcgc
     1261 gagtcgtcgc gtcgcggttc ctcgcgccgt gcttcgtcac gtcgcggcgc ttccctccgc
     1321 ggctgatcgc gcaaacccgc gtccgcctcg aggaccggca aatccgccgg cgcgtcggac
     1381 accgtgtacg acggcagacc gtcgccgccg ctcactcgtt cttcagcgcc acttcgaccg
     1441 ccgcgacgac ggcggcggcg gcggcgattg ccacccggct gcgccggcgc gccctcggcg
     1501 gacgcctcct ccgcttcacg accgaaaatc ggctcgtcat cgtcctcttc cgattcgaag
     1561 aactcggtgg cgtgcgcggc cagtgcagcg cgctcgcgct ccgcgggatc gagcacgctc
     1621 ggagcctcgg cttcggcctg ttccgccacg ggctcttcga gagacggact gctcgtttcg
     1681 gcagcaccct cctccggctc gctcggcaat tgcgcggcga gccgctcgag cgcaggcgtc
     1741 cgatccaaaa gtcccttttc gatcgtcgcg gtgtcccaat cgcgtagcgc gaagacgccg
     1801 ggcttcaccc gcacgagcgg attttccttg tcccccttct tcacgagcgc cgcgaggcgc
     1861 gcccccatcg tcacttcggg gctcttgccg acgtgactca gcagattctt ctcgatggcg
     1921 acgtcagtta tctctttgta atgtaagggt ttcccgacga ggcgcagcac ctgcgccgcc
     1981 gcttccgtaa acgtcattca aggttttctt tctctgaggc gggaacatgg ttcccgccgc
     2041 ttcctgacgt gtccccgggg aagcgcgcat cgctcccgcc gccggcggcg cacgtcacac
     2101 gcgaccgaca taccacgccc atccaggcgg gcaaaggctc aaggcaagag tctacggcgg
     2161 cttatcgaag gtcgcgggcc ctcgggcccg cagtccgggg atattgttgg aatcgtggat
     2221 gccgacctga tgctcgccga gctcacgcag gtcgccgaaa gtgtcggcat cgaggtccgt
     2281 agccgcacgc tccgccattt gccttcgctc gggggcctct gccgcatgcc gggccgcacg
     2341 ctcgtgctcc tgagctcgcg cgcgacacca cacgaacgct gcaccgtgct cgctcaagcc
     2401 ctcgccgagc tcggccactc ggcgcaccct gggctcggca cggcggcgcg cgcgctcgtc
     2461 gaacgtcacg gccgccccgc accgtcgaac accccaaccg agcacacgac accgaagaag
     2521 ggtccgggcc tcgcgggcat cggcgagcgc gggcggcggc gaatgtgaga ggctaagccg
     2581 agccaccgat gcacgtttcg ccacgagagc tcgtgcccct cgccccgctc acgacgctcg
     2641 gtgtcggggg gcaggcgcgt ttcttcgtcg atgcgagcga ggaggcgagc gtggtcggcg
     2701 cgctccgctg ggcgcgggag cgtggcctcg ccacgcgcgt gctcggcggc ggcagcaacg
     2761 tcgtcgcggg cgacgacggg ttcgacggac tcgtgcttcg gctcggaatg cgcgggcgac
     2821 gtttcacgac ggcgggcaac gacgtgctcc tccaagcgca agcgggagaa ccgtgggacg
     2881 agctcgtggc ggagacggtg acgcgcggtg cgcaagggct cgaatgcctg agcggcatcc
     2941 ccggcctggt tggtgcgacg ccgatccaga acgtcggcgc gtacggccaa gaggtcgccg
     3001 agacgatcgt ttccgtgcga gcgctcgatc gggaaacgct cgagacgcgc gagttcgctg
     3061 cggcggcgtg ccacttcgcc taccgcgaca gctggttcaa atccgaggta cccgagcgct
     3121 tcgtcgtgct cgcggtcacg tttcgcctga gcgccggggc accgggcgcc gtgcgctacg
     3181 ccgaactcga gcagcggctt cggagcgacg gtattgctcc cgaagccgcg ccgctcgggc
     3241 gcgtacgcga aaccgtgctc gccctgcgcc gcgccaagtc gatgctgctc gatccgagcg
     3301 acgagaacgg ccggagctgt ggctccttct tcgtcaatcc cagcgtgtcg cgcgagcgcg
     3361 ccgacgcgat cgcggcgctc gtgaaggacg cgaagatgcc acgcttcatg caaccggacg
     3421 ggcgcgtgaa gctcgccgcc ggctggctca tcgagcgctc gggcttcgcg aaagggacgc
     3481 gccggggcag cgtgggactc tccacgaaac acgcgctcgc actcgtcgcg cacgaggggg
     3541 ccaccgcgag cgccgtgctc gacttcgcgc acgagatcca aagcgccgtg cacgcgcgct
     3601 tcggcgtcga gctcgtgctc gaacccgtcg tgtggggggg tcagtccggg cgcgcggcgg
     3661 caggttccgc gacggcaggc tcggcgccgc cggcgacgct gccgtaaatc gaggcgatgg
     3721 cctcgtcgag gcgcgcggtt tcggtgccac cggcctgcgc catatcgggg cggccgccgc
     3781 ccgagccacc gacgagctct gcgacgccgc ggatgaggtc gcccgcgcgg tagcgagtcg
     3841 tgagcgcctt gctcaccgta agcacgagct gcgccttgcc gtccgcttcc gagccgacga
     3901 gcacgatgct gtcgccgagc ttgtcacgga gctgctcggc gagctcgcgc aaggcgccgc
     3961 gatcgttcac gctcgtgcgc acgccgagca cgcgcacacc gcccacgtcg cgcgccttgg
     4021 cgagcaagct ctcgaccccg ccgccgccgc ccgaagcgag cttcttctcg agctcttcga
     4081 tttgcttttc gagcgcgcgc tcgtgcagga cgagcttctg aatgcgctcg accagcatga
     4141 cgggcgtcgt cttcgccgcg cgcgacgcct cggcgagcga ggcctcgacc tcgcgcaaat
     4201 gggcgagcgc gccctccccc gtcacggcca aaatgcggcg gacgccggcg gcaactccct
     4261 gttcactcac gattttgaag agcccgatgt cgcccgtcgc gcgcgcgtgg gtgccgccgc
     4321 agagctcggt cgactcggcc atcgagagca tgcgcacgac gtcgccgtat ttttcttcga
     4381 agatcatcgt ggcgccgcgt ttgcgcgcct cttccatcaa gagcacctcg gtgcgcacgg
     4441 gggaattcct gagcgtgcgt tcgttgacga gctcttcgat gcgcgcgagc tcttcgggcg
     4501 tgagggcgcg cgggtgggtg aaatcgaaac gcagccgctc ggggcccacg agcgagccct
     4561 tttgctgcgc gtgcgggccg agcacctgcc ggagcgccca atgcaagagg tgcgtcgccg
     4621 agtgattgcg acgaatgcgc tctcggcgcg ggacgtcgac cgcgagctcc accgtttcgc
     4681 cgacgcgcag gccgccgcgc gcgacacggc cgcgatgcac gaagagcccc gttttcggtt
     4741 tgacggtgtc ctcgaccgtg agctcgccgt tcgcgctctt gatcgtaccg aggtcgcc
//
LOCUS       DATIML010001029         3264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4549415, whole genome shotgun sequence.
ACCESSION   DATIML010001029 DATIML010000000
VERSION     DATIML010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4549415"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..652
                     /locus_tag="VLJ38_17780"
     CDS             116..652
                     /locus_tag="VLJ38_17780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41435.1"
                     /translation="MPLFGRLRRLCSAGRWALAACALTVSAAAEPDESDPDEPPPIAR
                     GVAPREVGRPTVKLDRLELPAGFPRNTELERHFREQLKHAARHADWGAKRGAKIEYRV
                     KLEELSVRDGERVVHVRCTALGSLPKGRTTRTFIDFGGSPNERDKVVRHVLEIVARGI
                     VTRLAAIERERRAQASAN"
     gene            706..1533
                     /locus_tag="VLJ38_17785"
     CDS             706..1533
                     /locus_tag="VLJ38_17785"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HSU41436.1"
                     /translation="MVPTSAFTSRALFALIAVTSACETTTPRQPPAQTATALSAPTAP
                     APADAASTHPVPAAARDLDAQVPPKPSPQPASTACNVALVGDSLTDFRVHGGGYVRYL
                     EQRCPASHFENFAKGGAMVNQMRRWFEEQVVPEPHGTFTHVVVFGGVNDLYSDETAGR
                     TTSKIETDLSAIYAAAKAHGARVVALTVAPWGGFTRYFTPHRADTTRELNTWILAGPA
                     RGTVDVTVDAHALLGCGDPDKLCERYENARSDGLHFGRAGHEVLGRALYDAEFSACP"
     gene            1715..3085
                     /locus_tag="VLJ38_17790"
     CDS             1715..3085
                     /locus_tag="VLJ38_17790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41437.1"
                     /translation="MQPRVAASRLAALSLMLFGCGGGTSSGGTPHSGNAGSPASAGTG
                     GGSALAGSGGAGGTAAPGTTGGASGAPVAGTGGLNGLGGRTASGGMSATGGLGGTSGS
                     AGANSAGAASGASGSNGTAGAGGLVYSGPGCTVPVRENDQPALLSQTGCVEPADPTKA
                     AATLVPYDVNSPLWSDGAAKERYLSLPSGAKIHVKDCTAEPDTCKSVDDGGTAEDEGH
                     WDLPVGTTVVKVFLLGGAPIETRLLMRVSDSQWRGYSYEWNEAGTDATLLADQKDKVV
                     GAQTWHYPSRSQCLACHTEGAGRSLGPTTPQMNRDYAYAGGSMNQLDKFEALGVFEHA
                     PTRIAPYPAPAGTSELDGRARSYLHANCAICHRPGATVSDMDLRFEAPFAGMALCNQV
                     ITANEDDLTLPRLRLVPGDPTNSSLSYRMHATTGQRMPKIGSNLVDTDGTALIDQWIT
                     SITSCP"
BASE COUNT          543 a         1143 c         1120 g          458 t
ORIGIN      
        1 gcatcccccg cctccagggc ctgccgcgcc gagggcggag ccgtcacggc cgcttccatt
       61 gcctccaagt tacttcaact tggcccattg ggctccgagc cggtatttcg tcgagatgcc
      121 gctctttggt cgcctgcgcc ggctttgctc ggctggccgc tgggctctcg ccgcgtgcgc
      181 cttgacggtt tcggcggctg cggagccgga cgagtccgat ccggacgagc cgccgcccat
      241 cgctcggggc gtcgcgcctc gcgaggtcgg acgcccgacc gtgaagctcg atcgcctcga
      301 gttgccggcc gggtttccga gaaataccga gctcgagcgg cactttcgcg agcagctcaa
      361 gcacgcggcg cgccacgccg actggggcgc caagcgcggc gccaagatcg agtaccgcgt
      421 caagctcgag gagctcagcg tgcgcgacgg cgagcgcgtg gtccacgttc gttgcaccgc
      481 gctcggcagc ctgccgaagg gccgcacgac gcgcacgttc atcgacttcg gcggcagccc
      541 gaacgaacgc gacaaggtgg tgcgccacgt gctcgaaatc gtcgcgcgtg gcatcgtgac
      601 gcggcttgcg gcgatcgaac gcgaacgacg cgcccaagcc tcggctaatt gacggagcgc
      661 tcgcgaaaaa tcgaaaacgc tgagaaaaat tccgaatctc tgaccgtggt accaacctca
      721 gcctttacgt cacgcgcgct gttcgccttg atcgccgtaa cgagcgcttg cgaaacgacg
      781 acaccacggc agcctcccgc gcaaacggcg actgcgcttt ccgcaccgac ggcgccggca
      841 cccgccgacg cagcgagcac gcaccccgtg ccggcggcgg cgcgcgacct cgacgcgcag
      901 gtgcccccaa aaccctcccc tcagcctgca tcgacggcgt gcaacgtcgc gctcgtcggt
      961 gactcactca ccgactttcg cgtgcacggc ggcggctacg tgcgctacct cgagcagcgc
     1021 tgccccgcga gtcacttcga gaacttcgcg aagggcggcg cgatggtgaa ccaaatgcgc
     1081 cgctggttcg aggagcaagt cgtgccggag ccgcacggca cgttcacgca cgtcgtggtc
     1141 ttcggcggcg tgaacgacct ttacagcgac gagacggccg ggcgcacgac gagcaaaatc
     1201 gaaaccgatt tgtcggccat ctacgccgcg gccaaggcgc acggcgccag agtcgtcgcg
     1261 ctcacggtcg cgccctgggg cggcttcaca cgctatttca cgccacaccg cgccgacacg
     1321 acgcgcgagc tcaacacgtg gatcctcgcg ggccccgcgc gcggcacggt cgatgtgacc
     1381 gtcgatgcgc acgcgctcct cggctgcggc gatcccgaca agctctgcga gcgctacgag
     1441 aacgcacgct cggacggctt gcacttcggc cgcgcgggcc acgaagtgct cggtcgcgcg
     1501 ctctacgacg cggagttcag cgcgtgcccg tagcgctacc gggtcggcca tagcgggaga
     1561 aaccgccaag acgccgagcg aagacgccga gggcgccaag ggagccgggc gtgatttttt
     1621 gcagccccct tcggcaataa tccacgcgag cgtgtccacg aggagcggag ggcgccctgg
     1681 agcggggccg cgcgcaggct atactttcgg cccaatgcag ccccgcgtcg ccgcttcacg
     1741 cttagcagcc ctgtctctca tgctcttcgg ttgcggcggc gggacgagct ctggaggaac
     1801 gcctcattcc ggaaacgccg gcagccccgc ctcggctgga acggggggcg gcagcgcgct
     1861 cgctggctcg ggcggtgcgg gcggcacggc cgcacccggc acgacgggcg gcgctagtgg
     1921 tgcacccgta gcgggaaccg gcggtctgaa cgggctcggg ggtaggacgg cgagcggcgg
     1981 catgagcgcg acaggcggcc tcggcggcac gagcggcagc gcaggcgcaa acagcgcggg
     2041 tgccgccagt ggcgccagtg gctcgaacgg cacggcgggc gcaggcggtc tcgtttactc
     2101 cgggccgggc tgcaccgtgc ccgtgcgtga aaacgatcag ccggcgctgc tctcgcagac
     2161 cggctgcgtc gagcccgcgg atccgacgaa agccgcggcc acgctcgtgc cttacgacgt
     2221 gaatagcccg ctctggtcgg acggcgccgc caaagagcgt tacctgtcac tcccctccgg
     2281 cgcgaagatc cacgtcaagg actgcacggc ggagcccgac acgtgtaagt cggtcgacga
     2341 cggcggcacg gccgaggacg aaggccactg ggatttgccg gtgggcacga ccgtggtgaa
     2401 ggtgtttctg ctcggcggcg cacccatcga aacgcggctc ttgatgcgcg tgagcgactc
     2461 gcagtggcgc gggtacagct acgaatggaa cgaggcgggc acggacgcga cgctgctcgc
     2521 cgaccagaag gacaaggtcg ttggcgcgca aacctggcac tacccgagcc gctcgcaatg
     2581 cctcgcctgt cacaccgaag gcgcggggcg ctcgctcgga cccacgacgc cgcagatgaa
     2641 tcgcgactac gcctacgcgg gcggttccat gaaccagctc gacaaattcg aggcgctcgg
     2701 tgtgttcgag cacgcgccga cgcgcattgc gccctacccc gcgccggccg gcacgagcga
     2761 gctcgacggg cgcgcacgct cgtacttgca cgccaactgc gcgatttgcc accggccggg
     2821 cgcgaccgtg agcgacatgg atttgcgctt cgaggcgccg ttcgcgggca tggcgctctg
     2881 taatcaggtg atcacggcga acgaagacga cctcacgctc ccgcgcctcc ggctcgtgcc
     2941 gggcgacccg acgaactcga gcctttccta ccgcatgcac gcgaccacgg ggcagcgcat
     3001 gccgaaaatc ggctcgaact tggtcgatac ggacgggacc gcgctcatcg accagtggat
     3061 cacgtcgatc acgtcgtgtc cgtgacgcgc gcgcgagcgc ggcgacgcac gtggccgtga
     3121 ccgaacgcgc tgcacggcgc cgtacggccc gtcgcgaaga ttcagctcac cgtgcggcgc
     3181 cgtaatttga gcagcgggcg agccaattcg gactccgggg gaggggcgac gtcggcgcgt
     3241 gctcgcgccg cgacgacgag gtcg
//
LOCUS       DATIML010001030         2596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5421857, whole genome shotgun sequence.
ACCESSION   DATIML010001030 DATIML010000000
VERSION     DATIML010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5421857"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VLJ38_17795"
     CDS             <1..209
                     /locus_tag="VLJ38_17795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41438.1"
                     /translation="GGNIETLVTPESGGELVSDAASVAAACITLCRNPVELSVRRERA
                     RKNARAARPWAQVADEFLACVAGM"
     gene            489..734
                     /locus_tag="VLJ38_17800"
     CDS             489..734
                     /locus_tag="VLJ38_17800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41439.1"
                     /translation="MKTLFLALVLAFSIVGCGNNDCDDAVDKLKQCGFDSGSGSVDSN
                     DCSGKSECAAKCINNASCSEITGQTTTGSYFTCLSKC"
     gene            complement(1142..1804)
                     /locus_tag="VLJ38_17805"
     CDS             complement(1142..1804)
                     /locus_tag="VLJ38_17805"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSU41440.1"
                     /translation="MTFTRFSRFHAVLVLAACLASLVARTTWPLVAAGCASFAALILT
                     TRGAHTPSGAFGWGNAITSLRFVLSSCVGVVPASVPTWALGATTLVLFALDGLDGAVA
                     KRRGEASPFGAYFDMETDAYFVLVAGLALFQRGRYGAWILVAGLLRYAYVVALALVPA
                     RRGDVPRFAFGRHAFTTLMLGLVLGMVLGEPFGTVAAALGCGLVTASFAWSFYWSYSR
                     PT"
     gene            1923..>2596
                     /locus_tag="VLJ38_17810"
     CDS             1923..>2596
                     /locus_tag="VLJ38_17810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41441.1"
                     /translation="MSHDPSRARALWITAPGQAAIREETLATPAAGEALVETLFSGVS
                     RGTESLVFSGHVPESEYDRMRCPFQAGDFPAPVKYGYANVGRARTGAFAGRPVFCLYP
                     HQTAYVVPETALVPVPDGVPAERAVLAANLETALNALWDARPQIGDRVSVVGAGVVGA
                     LVAYLAARVAATDVELIDVRPERASVAAALGVRFAQPDGASTERDLVFHASGRADGAA
                     QALTLGA"
BASE COUNT          458 a          823 c          949 g          366 t
ORIGIN      
        1 ccggcggcaa catcgaaacc ctcgtcactc ccgaaagcgg cggcgagctc gtctccgacg
       61 ccgcgagcgt cgcggcagcg tgcatcacac tttgccgcaa ccccgtcgag ctcagcgtac
      121 ggcgtgagcg cgcgcgaaaa aacgcccgtg cggcgcgccc ctgggcccaa gtagccgacg
      181 aatttctcgc ctgcgtcgcc gggatgtagg tcgctccgaa aatcgcccac gcataggccc
      241 gatgtcggag cgcgcgagcg gattcgtcgg ccgaaggagc ccgacctcct ggaccagtgg
      301 caactgtcgt ggcgttgtcg cgtgaagtag gccggggtcc tcatacataa taggggagct
      361 gtcgccttcg gtgcgcgtcc catacttgac agctaagtta tgagcatgag accctcggag
      421 gattgggagc gcggagaact gtctgcgcag aacgttcaga gcaacgttga acctgtggag
      481 gagatacgat gaagaccttg tttttggcgc ttgtgctcgc gttctcgatc gtaggctgtg
      541 gcaacaacga ctgcgacgac gccgtggata agttgaagca gtgcggcttc gacagcggga
      601 gtgggagcgt cgattcgaac gactgcagcg ggaagagcga gtgtgcagcg aaatgcatca
      661 acaacgccag ctgctccgaa attacgggac agacgacgac gggctcgtac ttcacttgcc
      721 tcagcaagtg ctgacccacg cttcgtgacg ggtccggtgg cgggcatggc acgagtgaag
      781 cgcacggggc gcgcgctcaa agagccccgt ccggccccgc cgccccgtcc caccccgcca
      841 tcgaaggcgg gcaagcgtga gcagtgctgc ccgactcccg ccaatcgggt catcctctcg
      901 ctcgccgacc cgatcgtgcc ggacgacgtc atgttccgcg gcttccgccg cattcgcgca
      961 gacgggagct cgctcccgag ccgagatctt cgtttacggc tttctggtcg atttgtaggg
     1021 gccctccctc tcgggaaggc tgcgaaggcg tcgatgcgtt gctgcgaacg acatactcgg
     1081 gcgagagcgc gcaacctcgc tcgatatcga gccggcgcgt atgccagcag ccgtaggcgg
     1141 gtcacgtcgg gcggctgtag gaccagtaga aggaccaggc gaacgaggcg gtgaccagcc
     1201 cacagccgag cgcggcggcg acggttccga acggttcgcc caacaccatt cccagcacca
     1261 agccgagcat gagggtcgtg aacgcgtggc gaccgaaagc gaagcgaggg acgtcgccgc
     1321 gacgcgcagg cacgagagca agagcgacca cgtacgcgta gcgcaggagg ccggcgacga
     1381 ggatccaagc gccgtaccgg ccgcgctgaa agagggcgag gccggcgacc aagacgaagt
     1441 acgcgtccgt ttccatgtcg aagtaggcgc cgaacgggga ggcttcgccg cggcgcttgg
     1501 cgacggcgcc gtcgagaccg tcgagcgcaa aaaggacgag cgtggtcgcg ccgagcgccc
     1561 aggtggggac gctcgcggga acgacaccga cgcacgacga gaggacgaag cgcagtgagg
     1621 tgatggcgtt gccccagccg aaggcgccgc tcggggtgtg ggcgccgcga gtcgtgagga
     1681 tgagggcggc gaagcttgcg cagccggcgg cgaccaaggg ccacgtcgtg cgcgcgacga
     1741 gcgaggcgag gcacgcggcg agcacgagca cggcgtgaaa gcggctgaag cgcgtgaagg
     1801 tcacgcgcga cggcccgcgc gaaagccgag cacgatgaag ggcgtcacgg tcgcgcgcga
     1861 gggtaccagt tttcggctgc ctccggagcg cgcgcgccgg atacgctacg ctccgccgca
     1921 cgatgagcca cgacccgagt cgcgcgcgcg cgctttggat caccgcgccc ggtcaggcag
     1981 cgatccgcga agaaacgctg gctacgcccg cagcgggcga agcgctggtc gaaacgctgt
     2041 tcagcggcgt gagtcgcggc acggagtcgc tcgtcttttc ggggcacgtg ccagagagcg
     2101 agtacgaccg aatgcgctgt ccgtttcagg cgggcgactt cccggcgccg gtgaagtacg
     2161 ggtatgcgaa cgtcgggcgc gcacggacgg gcgcgttcgc agggcggccc gtgttctgct
     2221 tgtatccgca ccagacggcg tacgtcgtgc cggagacggc cctcgtgccg gtgccggacg
     2281 gcgtgccggc ggagcgtgcc gtgctcgcgg cgaatctcga gacggcgttg aacgcgctct
     2341 gggacgcgcg gccgcaaatc ggtgatcgcg tgtccgtcgt gggcgcgggc gtcgtggggg
     2401 cgctcgttgc gtatctggcg gcgcgcgtgg cggcgacgga cgtcgagctc atcgacgtgc
     2461 ggcccgagcg cgcgagcgtg gcggcggcgc tcggcgtccg tttcgcgcaa ccggacggcg
     2521 cgagcaccga gcgcgacctc gtgtttcacg cgagcggccg cgctgacgga gccgcgcagg
     2581 cgctcacgct cggcgc
//
LOCUS       DATIML010001031         4214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1957286, whole genome shotgun sequence.
ACCESSION   DATIML010001031 DATIML010000000
VERSION     DATIML010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4214
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957286"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VLJ38_17815"
     CDS             <1..184
                     /locus_tag="VLJ38_17815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41442.1"
                     /translation="PGLFDGTHHFVVEPLSGHRTRFTQREDFSGILVPFVGFAPYKAG
                     WERMNRALKARVEATP"
     gene            complement(156..614)
                     /locus_tag="VLJ38_17820"
     CDS             complement(156..614)
                     /locus_tag="VLJ38_17820"
                     /inference="COORDINATES: protein motif:HMM:NF021425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2127 domain-containing protein"
                     /protein_id="HSU41443.1"
                     /translation="MKLIILYKAVKAPLVLALAVVLTVNPEGTLRTLEHAARDLSEGG
                     TLLGRLARFIDAHLTRRAIGRGALLAWLDGLTTSLEAFLLWRGKAWGEWLVVVGLATL
                     VPFELDALVRHPTFTRLFAATLNAAVVAYLVRSRLAERRAAATASPRRAP"
     gene            1010..1903
                     /locus_tag="VLJ38_17825"
     CDS             1010..1903
                     /locus_tag="VLJ38_17825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSU41444.1"
                     /translation="MGIHDQDTLVTVNDPAQLEGVTGNDCLVIIHRRDGLRLTRRIDL
                     ARPVIRIGRDTANDLVLDDTEVSRRHARLEARGRSWVLMDVGSTNGTFLNDRELDGCV
                     RLRGGDRLKIGSHIFKFLTGDDVESAYHDEIYHLSITDNLTGIANQRALRDELAREFS
                     RARRHALPTSFLMIDIDRFKEVNDGYGHLAGDAVLARVASTAQAATRDGDTVARYGGE
                     EIAVLLPQTELDEARAVGERVRAAIEALVTEYRGLSIGVTVSVGCAALRPDDTELDDL
                     VERADAKLYEAKAAGRNRVAH"
     gene            complement(1947..>4214)
                     /locus_tag="VLJ38_17830"
     CDS             complement(1947..>4214)
                     /locus_tag="VLJ38_17830"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSU41445.1"
                     /translation="ARAAERRISGELGGDAATPQTAERNPGAPSAAQPTPARDPKQLA
                     RMADVLHVLRQAVTGDGRLAIGELGVSQGGSRLDEHGYLVGAGGRYHLVLIYPALESD
                     EGRELKPLVDRIRGARDRALAGLNAPGLEADLTGAPALAVDEVASIQQGSQVSSVLST
                     AGIFVLLMAAFRSIRHVAVAQVPMLASMLLTLGFVQVVYGGLNLVTSSFMSVLLGLGI
                     DFSVHLLYRYGEARERGEAERQALASSVLEGGPAVALGASTAIIAFLTTTTTEFAAFS
                     QLGVITTTGLVTVVICAFLLFPPLMPWLGGKKPVHMREFFGLSLVLKLVGRAPRWVLG
                     TSLALTVAAVVSLLVKPPAFNGRTFDFLPEHAESYRGLLRIQQAGTPPLDAHFTVGSF
                     AEAAAMAERLRAIPEVSVVQSPSDLVPPETPEQIARVRRAMAGLPPGVPKIPVALAKD
                     GPARLAALRDLGDAFDEVGFALRQAGKDDSGATRVAGELGELGHWLEKQPDQGTAALE
                     RVSRGLENALERAVTTARHIAERGSYSPRDLPPVGQVRYASLDGKKLAVHAYPAGDVG
                     EASFAQRFEARLRPLDPNVAGTALNMLPHQRYITDGFRRAAAIAFVLIAILIALTFRR
                     TSDTLLALFPVVVAWLWMLALMRPFGIDFTPANMVALPLLLGVGVDTGVHMIHRTRES
                     DGPASLQTLLHGTGTAVSVGTLTNIAGFAALIAADYRAMQGLGILLSIGIALSLVTSV
                     VVLPALLVAIRRASV"
BASE COUNT          678 a         1415 c         1501 g          620 t
ORIGIN      
        1 cccgggcttg ttcgatggga cgcatcactt cgtcgtcgag ccgctctccg ggcaccgcac
       61 gcgcttcacg cagcgcgaag acttcagcgg catcttggtg cccttcgtgg gcttcgcacc
      121 gtacaaggcg ggatgggagc gcatgaaccg cgcactcaag gcgcgcgtcg aggcgacgcc
      181 gtagcggccg cccggcgctc agccagccga gaacgaacga ggtaggcgac gaccgccgcg
      241 ttgagcgtgg cggcaaacag gcgcgtgaac gtcgggtgtc gaacgagcgc gtcgagttcg
      301 aagggcacga gcgtcgcgag cccgaccacg acgagccact cgccccacgc cttgccgcgc
      361 caaagcaaga acgcctcgag ggatgtcgtg agtccgtcga gccaagcgag cagggcgccg
      421 cgaccgatcg cgcgccgcgt gaggtgcgcg tcgatgaagc gcgcgaggcg tccgagcagc
      481 gtgccgcctt cgctcaaatc gcgtgcggcg tgctcgaggg tccggagtgt gccttcggga
      541 ttgacggtga gtacgacggc gagggcgagc acgagcggcg ctttgacggc cttgtacagg
      601 atgatgagct tcatgccgcg cgctcgctgc cgcctcgtgt gctttcgagc caccatcgct
      661 gccatgtgtc tgccctttgt tcgcacggca ggcggcgcct ggcgacgggg gtgattgcta
      721 cgatcgtctg cgagtcggcc tcgctgcacg gccgtgctgc aagccaccca ctccgagaaa
      781 ctcatcaaga tgcacgccgg ctcgtcgctg gattggagag cacgttcgag ttgaaccgag
      841 ccgctaaggc agggtgctca ctgccttcgt tcgggctcgg ttgccgctgt aacggggcct
      901 caccgagcac caacgcctac ctgtcggcgc gtcgcgtaca cggacgcacg tctagcgtga
      961 acccgtcatt ggattgcctg tacacgcgtg ccgtggcatc gtcgccgacg tgggtattca
     1021 cgaccaagat accctggtta cggtcaatga ccccgcgcag ttagagggcg tgacgggcaa
     1081 cgattgcctc gtcatcatcc accggcgtga cgggctgcgc ttgacgcgcc ggatcgattt
     1141 ggcgcgtccc gtcatccgca tcgggcgcga caccgccaac gatctcgtgc tcgacgacac
     1201 cgaggtatcc cgccgtcacg cgcgcctcga ggcgcgtggc aggtcgtggg tgctcatgga
     1261 cgtgggctcg acgaacggga cgttcttgaa cgatcgcgag ctcgacggct gcgtgcggct
     1321 gcgcggcggt gatcggctga aaatcggctc gcacatcttc aagttcctca cgggcgacga
     1381 cgtcgagtcc gcgtaccacg acgaaatcta ccacctgtcg atcaccgaca atctcacggg
     1441 catcgcgaac caacgcgcgc tccgcgacga gctcgcgcgc gagttttctc gcgcgcgccg
     1501 gcacgcgctc ccgacgagct ttctcatgat cgacatcgat cgcttcaagg aagtgaacga
     1561 cggctacggg cacctggccg gggacgccgt cctcgctcgc gtcgcgagca ccgcgcaggc
     1621 agcgacgcgc gacggcgaca ccgtggcgcg ctacggcggg gaagagatcg ccgtgctctt
     1681 gccgcaaacc gagctcgacg aggcgagggc cgtcggcgag cgcgtccgag ccgcgatcga
     1741 ggcgctcgtg accgaatatc gcggcctctc gattggcgtc accgtgagcg tcggctgcgc
     1801 cgcgctccgg cccgacgaca cggagctgga cgatctggtc gaacgcgccg atgccaagct
     1861 ttacgaggcg aaagccgcgg gtcgtaaccg cgtcgcgcac tgagcggcgc cccgaacgca
     1921 ctcactccgc ggcgccgtac ggcacgctag accgacgccc ggcggatggc gacgagcagc
     1981 gccggcagca cgacgacgct cgtcacgaga ctcagcgcga tgccgatgct caagaggatg
     2041 ccgaggccct gcatggcgcg gtagtcggcg gcgatcagcg cggcgaagcc cgcgatgttc
     2101 gtgagggtgc cgacgctcac ggccgtgccg gtgccgtgaa gcagggtttg gagcgacgcg
     2161 gggccgtcac tctcgcgcgt gcggtgaatc atgtgcaccc ccgtgtcgac gccgacgccg
     2221 agcaggagcg gcagcgcgac catgttggcg ggcgtgaaat cgatgccgaa cggtcgcatc
     2281 agcgcgagca tccagagcca agcgacgact acggggaaca aggcgagcag cgtatcgctc
     2341 gtgcgccgga aggtgagggc gatgaggatc gcgatcagca cgaacgcgat ggccgccgcg
     2401 cgccggaagc cgtccgtgat gtaccgctgg tggggcagca tgttgagcgc ggtgcccgcg
     2461 acgttcgggt cgagggggcg gagccgcgct tcgaagcgct gggcgaagct cgcttcaccc
     2521 acgtcgcccg cggggtaggc atggacggcg agctttttgc cgtcgaggga cgcgtaccgc
     2581 acctggccga cgggcggcag gtcgcgcggt gagtagctgc cgcgctcggc gatgtgacgc
     2641 gcggtcgtga cggcgcgctc gagggcgttc tcgagcccgc ggctcacgcg ctcgagcgcg
     2701 gcggtgcctt ggtctggctg tttttcgagc caatgcccga gctcccctag ctccccggcg
     2761 acgcgcgtcg cgccgctgtc gtccttgccg gcttggcgca gcgcgaagcc gacttcgtcg
     2821 aaggcgtcgc cgagatcgcg cagggcggcg agtcgcgccg ggccgtcttt cgcgagcgcg
     2881 acggggatct tcggaacccc cggcggcaag ccggccatgg cgcgccgaac gcgcgcgatt
     2941 tgctcgggtg tctcgggcgg cacgagatcg ctcggactct gcacgacgga cacctccggg
     3001 atcgcgcgca gtcgctccgc catggctgcc gcttcggcga acgagccgac cgtgaaatgc
     3061 gcgtcgagcg gcggcgtgcc ggcttgctgg atgcgcaaga ggccgcggta gctctcggcg
     3121 tgctcgggca aaaagtcgaa ggtgcgcccg ttgaacgcgg gcggcttcac cagcagcgaa
     3181 acgacggcgg cgacggtgag cgctaggctc gtgccgagca cccagcgcgg cgcgcgcccg
     3241 acgagcttga gcacgagcga cagcccgaaa aactcgcgca tgtgcacggg ctttttgccc
     3301 ccgagccacg gcatcagcgg cgggaacaac aaaaacgcgc agatcacgac cgtcacgaga
     3361 cccgtcgtcg tgatcacgcc cagctgcgaa aacgcggcaa actccgtggt cgtcgtcgtg
     3421 aggaacgcga tgatcgcggt cgaagcgccg agcgccacgg cgggcccgcc ttcgagcacc
     3481 gagctcgcga gcgcttgccg ttcggcttcg ccgcgctcgc gcgcctcgcc gtagcggtag
     3541 agcaagtgca cgctgaagtc gatgccgagg ccgagcagca cgctcatgaa gctcgaggtg
     3601 acgaggttga gcccgccgta gacgacctgc acgaagccga gcgtcagcag catgctcgcg
     3661 agcatgggca cctgcgccac ggcgacgtgc cggatcgagc ggaacgccgc catgagcagc
     3721 acgaaaatgc ccgccgtcga cagcacggag ctcacttgtg agccctgctg gatgctcgcg
     3781 acctcgtcga cggcgagcgc cggcgcgccc gtcaggtcgg cttcgagccc gggcgcgttc
     3841 agtccggcga gcgctcggtc gcgagcgccg cggatccgat cgacgagcgg cttgagctcg
     3901 cgcccttcgt cgctctcgag cgccgggtaa atcaggacga ggtgatagcg cccgcccgcg
     3961 ccgacgagat agccgtgttc atcgaggcgc gagccgccct ggctcacgcc gagctcgccg
     4021 atggcgaggc gtccgtcgcc cgtgacggct tggcgcaaca cgtgaagcac gtccgccatg
     4081 cgcgcgagct gcttcgggtc gcgcgcgggc gtcggctgcg cggcggacgg cgctccgggg
     4141 tttcgctcgg ctgtttgagg cgtcgcggcg tcgccgccga gctcaccgct gatccggcgt
     4201 tcggccgcgc gggc
//
LOCUS       DATIML010001032         2196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3394993, whole genome shotgun sequence.
ACCESSION   DATIML010001032 DATIML010000000
VERSION     DATIML010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3394993"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1590)
                     /locus_tag="VLJ38_17835"
     CDS             complement(<1..1590)
                     /locus_tag="VLJ38_17835"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HSU41446.1"
                     /translation="MSIPRLIRIALVAASYAVIARLGLALDAVGGLATLVWPPTGLAL
                     AALVVFGRDDWPGVALGAFAANLWVRAPPLVAAGIAVGNTLEAVIGVALVTRAGAFRR
                     SLDDLRSVARLVVLAALVSTLVSASGGTLAMVLGHIVPASRAAQTWLAWWVGDMMGNL
                     VVAPLLLTLTAADDAGRSGSRAEALLLAVLFALTLGLVFGRSESAFVVAFREPHVLMP
                     FLIWASVRYGPRGAAVATFFASAAAVTGTTLGRGSFVRGSLHESLLAVQSFMAVVAVT
                     FLFLAAVTAERRRLLARERAARAEAEQAVKAREAFLAVASHELRTPLTPLELELEALL
                     RSPAVTDETLRRRLERAKRQSSRLVRHVEALLDASRLAAGKLDLDLERCDGHDLAREI
                     VEQARTEAERAGSTLTLEASGPTDGCWDQHRVGQALSNLLANAIKFGGGRPVSISLKG
                     SRERLVIVCTDRGVGIEPSVIGSIFERFERAPASRNHGGLGLGLYVAREIARAHGGDV
                     TVESSVGNGSTFNLWLPRAAEK"
     gene            2012..>2196
                     /locus_tag="VLJ38_17840"
     CDS             2012..>2196
                     /locus_tag="VLJ38_17840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41447.1"
                     /translation="MSTRSVLGAAAFSNSDAPPRANSSAEAELIARLASGDRDAFEAL
                     MRSNNRRLFRAARAVVG"
BASE COUNT          357 a          793 c          754 g          292 t
ORIGIN      
        1 tttctccgct gcgcgcggca accagagatt gaacgtcgag ccgttgccga cgctgctctc
       61 gacggtgacg tcaccgccgt gcgctcgcgc gatctcgcgc gcaacgtaaa ggccgaggcc
      121 gaggccgccg tgattgcgag atgcgggggc ccgttcgaac cgctcgaaga tcgaaccgat
      181 gacactcggc tcgataccga cgccgcggtc cgtgcacacg atgacgaggc gctcgcgact
      241 acccttgagg ctgatgctta ccggccggcc gccgccgaac ttgatggcgt tcgcgagcag
      301 gttcgagagc gcttggccga cccggtgctg gtcccagcac ccgtcggtcg gacccgacgc
      361 ttcgagcgtg agcgtcgacc cggcgcgctc cgcctcggtc cgcgcctgct cgacgatctc
      421 ccgcgcgagg tcatggccgt cacagcgctc gaggtcgagg tcgagtttgc ccgccgcgag
      481 gcgtgacgcg tcgagtagcg cttcgacgtg ccggacgagg cgcgagctct gccgcttggc
      541 gcgttcgagt ctgcgccgga gcgtctcgtc cgtgacggcc gggctgcgca gcagcgcctc
      601 gagctcgagc tcgagcgggg tgagcggcgt gcgcagctcg tgcgacgcga cggcgagaaa
      661 tgcctcgcgc gccttgacgg cttgttcggc ctcggcgcgc gccgcccgct cgcgcgcgag
      721 caatcgccgc cgctcggccg tcacggccgc gagaaacaag aacgtgaccg cgaccacggc
      781 catgaagctc tgcacggcga gcaagctctc gtgcaagctg ccccgcacga acgagccgcg
      841 accgagcgtg gtgcccgtca cggcggccgc cgacgcaaag aacgtcgcca cagcggcgcc
      901 gcgcggtccg tagcgcacgc tcgcccaaat caaaaatggc atgagcacgt gcggctcacg
      961 gaaggcgacg acgaacgcgc tctcggagcg accgaacacg aggccgagcg tgagcgcgaa
     1021 gagcaccgcg agcagcaacg cctccgcgcg tgaacccgaa cgcccagcat cgtcggctgc
     1081 cgtcagcgtg agcaagagcg gcgcgaccac cagatttccc atcatgtcgc ccacccacca
     1141 cgccagccag gtttgcgcgg cgcggctcgc cggcacgatg tgcccgagca ccatcgcgag
     1201 cgttccgccg ctcgcgctca cgagcgtgct cacgagcgcc gccaggacga cgagtcgggc
     1261 gacgctgcgc aggtcgtcga gagaacggcg aaatgcgccc gcgcgtgtca cgagcgcaac
     1321 gccgatgacg gcctccagcg tattgccgac ggcgatgccc gccgccacga gcggaggcgc
     1381 ccgcacccag aggttcgccg caaacgcgcc gagcgctacg ccgggccagt cgtcccgccc
     1441 gaatacgacc agcgccgcga gcgcgagccc ggtgggcggc cagacgagcg tcgcgagtcc
     1501 tcccaccgca tcgagagcga ggccgagtcg cgcgatcacg gcgtaagagg ccgcgacgag
     1561 cgcgatacgg ataagcctcg ggatcgacac ggggagcgat gctagccgag ccgcgcgctc
     1621 acggcttggt gcgcaggcca aagcggcccc ggggcgctct tatgagctag cggggcccag
     1681 gggccggcgt ccctgccaac ggctgactgg gaccgggcgc gtaacggcgc tcgtgattcc
     1741 gccctcgacc taggctcacg ccgctcgttc gtgcggactc ttcggtcgaa cggcgtgagc
     1801 gagctccacg ggtggatccg cgaacgcgtg gcgatgccgc ccgagcacga ctgtcttgct
     1861 cgctgctcac gatctgcgcg tacgcgcgca aaaccacgcg cttctccgcg cgagcccgga
     1921 gccgagcagt tgccgcagga gcactcgggt cctatcgctc tcgtgtcggc tcgggcggtg
     1981 cgcgcgagcg cagccggcaa acggggtctt catgtcgaca cgatccgttc tcggcgcagc
     2041 cgcgttctcg aattccgacg cgccgccgcg cgccaactcc agcgctgaag ccgagctcat
     2101 cgcacgactc gctagcgggg accgcgacgc gttcgaagct ttgatgcgca gtaacaaccg
     2161 ccgtcttttc cgcgccgcgc gcgccgtcgt aggcaa
//
LOCUS       DATIML010001033        12101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5708310, whole genome shotgun sequence.
ACCESSION   DATIML010001033 DATIML010000000
VERSION     DATIML010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 12101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12101
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5708310"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VLJ38_17845"
     CDS             complement(<1..244)
                     /locus_tag="VLJ38_17845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41448.1"
                     /translation="MLTEAQQHEFWSEGYVVLRATFTAAEIAAMDQAFRRLEVRAQGL
                     CGPTLVEGSLFVVERRPEAPLRIERIVWCGGAEPDLG"
     gene            complement(319..1467)
                     /locus_tag="VLJ38_17850"
     CDS             complement(319..1467)
                     /locus_tag="VLJ38_17850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSU41449.1"
                     /translation="MTPLTILSEDERMFFDTVLAFARERVAPRVSSMDAASTLDPGVL
                     RGLFELGLMGIETPSERGGGGSSFFSAILAVQALARVDPSVSVVVDVQNTLVNNALLR
                     WGTDAQKERYLGKLASEWVGSYALSEAGSGSDAFALKARAERRGDRWVLNGRKLWITN
                     AAESSLFVVFANADPSQGYKGITAFLVERGFPGFTVGKKEHKLGIRASSTCELVLDDC
                     EVPSENLLGELGRGYKIAILTLNEGRIGIGAQMLGLAEGALAHTLDYVRQRKQFGKTI
                     AEFQGVEFQLARLALDIEAARLLVYNAARLKDAGHDFVNEAAMAKLFASEVAERTASQ
                     AVDLFGGVGFTQEFPVEKLYRDAKIGKIYEGTTNMQLQTIARGLMSKT"
     gene            1539..2666
                     /gene="aroC"
                     /locus_tag="VLJ38_17855"
     CDS             1539..2666
                     /gene="aroC"
                     /locus_tag="VLJ38_17855"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HSU41450.1"
                     /translation="MSGNSFGQAFRVTTAGESHGPGNVVIIDGCPAGIPLGVEDLAED
                     LGRRRPGQSHLVTQRKEADVPEILAGVFEGKTTGTSISILIRNQDQKSRDYDDIKDKY
                     RPGHADFTFDQKYGRRDYRGGGRSSARETVARVAAGAVAKKVIALGFGGRVTGYVKQV
                     GHLVADVPDPASVTLDQVERLPDGSPNLVRCPDAACVPRMIELIESLRKDQDSIGGVS
                     EIVAVGVPAGLGEPVFDKLKADLAKALFSLPAVLGVEYGIGFGCATLRGSENNDAFFV
                     HASGESKRVSTRTNRHGGMLGGISSGMPIVLRAAVKPTSSLPREQETVTTEGEPTTIR
                     TRGRHDPCLLPRFVPMGEAMVALVLADHWLRSCAQKYALPR"
     gene            2751..3611
                     /locus_tag="VLJ38_17860"
     CDS             2751..3611
                     /locus_tag="VLJ38_17860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41451.1"
                     /translation="MLLRSRVVLTLAWVATACATATEADQDSVPIEVGSGGSAGAAST
                     GSGGDSSSGATGGDTSGIGGSSSGNAGSGGDSGMVHAVGGSAGMASGGTGAMGGTGAM
                     GGTGAVGAMGGTGAVGSGGTSAGGRAGRSGGGSAGIAQGVGGTAGMGVGGSGARGGSA
                     GAGAIGGKGGSGSGGRVGSGGTLGSGGTSSGTAGQGTAGTGTSGSAGSGSSSCDPPVQ
                     TTSCTAASDFCAGYAYMPNDVCLATCAVGTAGCIQNRKMLFKCVANCTAQTPGTGTDA
                     STWSIVNQCN"
     gene            complement(3663..4709)
                     /gene="pstS"
                     /locus_tag="VLJ38_17865"
     CDS             complement(3663..4709)
                     /gene="pstS"
                     /locus_tag="VLJ38_17865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HSU41452.1"
                     /translation="MLSCTRRHVLGWLGSSMVVACSNDGTVALNGAGATFPYPLYTKW
                     IDEYRGVSPNVRINYQSIGSGGGVRQIVAGTVDFGASDVPAEPDEERGATGPIVHVPT
                     AVGCVVVSYNLPELTTPLRLTPELLSAIYLGAITRWNDRALALVNPGAALPDLPITVV
                     FRTDGSGTTAIFTRFLAASSPGWRERAGAGKNVRFAVGLGAKGNEGVSGQLQATPGSI
                     GYTELAYATQGGLPRAAIRNRAGEFVAPSAAAALSAADTVELPVTLQATLEGATNPQA
                     YPLAAYTYLLVYEHAVDARRGEALAQFIWWGVHEGQRFAPALDYAPLPARAVLEVEKT
                     LRKLRAGGKPALAI"
     gene            4821..5642
                     /locus_tag="VLJ38_17870"
     CDS             4821..5642
                     /locus_tag="VLJ38_17870"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU41453.1"
                     /translation="MRKVFENRWVLVTGASSGLGEELAKRLAQHGAHLVLTARREDRL
                     ENLAADLRRVNGTDTVVIPADLARPDGAERVLTALRERNITISHLVNNAGFGSAGAFS
                     ELDPERESAMVELNVGAVVRLTRGLLGPMLRAADGGVLNVASTAGLQPVPFMATYAAS
                     KAFVVNFTLALAAELEGTGVRAMALCPGPVQTGFQAAAGFQRPALPFAVLTPNRTIRG
                     ALAAYERGEHVYTPGLVNGVQALAARVLPHGVLTWAASRTMRRLGRAPAKLGSKG"
     gene            complement(5708..6937)
                     /locus_tag="VLJ38_17875"
     CDS             complement(5708..6937)
                     /locus_tag="VLJ38_17875"
                     /inference="COORDINATES: protein motif:HMM:NF024876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase MA family metallohydrolase"
                     /protein_id="HSU41454.1"
                     /translation="MVRVVSRLLLLLTLLLFGGSASAVEAPDAQPRERTGHTELSGPS
                     SHAIEPPVVDTTARDAQPADAPRLGEEHAKIPAVAAGFSTYDGGWIRITYHPSSRERI
                     DPLITAADDAKRELEDWLGRPVLGKVRVDVARTPGEMQTFAPRGAPYPEYASGVAYPE
                     LGLVLLTLTPRFPNESLDLAQVFRHELAHVALTDAVGPHPIPRWFNEGFAVMASGETS
                     FERMWTLSTATISDRLLPLAQVERSFPSDENKASIAYAEAADVLRFLIRREDRHRFRA
                     LVAELGDGSTLDHAARQAYGVDLVTLEHEWREAVAKRYTFWPILCSGTVVWAGVMALF
                     VWGWRKRRARSKATLARWAQDEAREDRLRKLEENARIHIVLQRAPAETATPLPSGAPS
                     EIDVPRVQHDGTWHTLH"
     gene            complement(7025..7747)
                     /locus_tag="VLJ38_17880"
     CDS             complement(7025..7747)
                     /locus_tag="VLJ38_17880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41455.1"
                     /translation="MSLEDTARAPRSAEVAATLAVGALASAIVALPAVRRVAGGSASA
                     GFVWLGLAGSTALVLGPLLVLSRATRRSTAVWRPAFIGVALAAAPAMALGEELKLHTH
                     HRPLGAATFGVLALLLVLFSVVVTVRLFAVIGPPVSSARRSAARVLVTLAALGLGLVV
                     LRAGASEAYGADVLDVARVLIVATLADRALDSPRVVALARRAGVFAWVLLVLVGFFAA
                     RGDVRVKIRERAPVLGGPAAWL"
     gene            complement(7761..8816)
                     /locus_tag="VLJ38_17885"
     CDS             complement(7761..8816)
                     /locus_tag="VLJ38_17885"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU41456.1"
                     /translation="MKNPWILVTGATGLIGGTLVRKLVERGEKVKAFVRAGADLRGLE
                     GLPQDRCQLAFGDVTVEHTVYRALAGCSQLYHVAAPFQYMPRHPQRVIDATTQGMRAT
                     LGAARERGIENLVVTSSAAVLGTISTPEAMDETHEYNLVDPEPYVQAKLEADRIVQEL
                     VGDGMPIVSVLPTAVFGPGDYKPTPNGQSLIQYLKLSPTFSVPVSAGGISVVDVEDVA
                     LGHIRAMEVGDVGERYILGGENVTFTQFFQMLADITGLAEPSEPKGPLTIAFFAWLLE
                     FHAKLTNTQPTLTGRLARDYAHSYVWVTSEKAEQGLGYTHRPARETLARGVRWLLEQG
                     MVPAPAADRVRLELRPV"
     gene            8920..10167
                     /gene="dinB"
                     /locus_tag="VLJ38_17890"
     CDS             8920..10167
                     /gene="dinB"
                     /locus_tag="VLJ38_17890"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF002677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HSU41457.1"
                     /translation="MTSAAERWILHADMDAFYASIEQRDHPELRGKPVIVGASSKRGV
                     VAAASYEARVFGVRSAMPGFRARELCPDGVFLPSNMAHYVAVSAEVHAVFERFTPEIE
                     PIALDEAFLDITGSLALFGAPQKLAAELKRAVREATALNVSVGLAPNKLVAKLACTLG
                     KPDGLKVIEPHEVRAFVDPLPIRRLWGVGPVLGAKLASLGVETFSDLSSYHPNELANA
                     LGERGAELQRLARGEDDRPVLAYREPKSYGEESTFESDVSDRTRVTAALTEHAETVAR
                     RLRHDDYAGRTVTIKAKLGRARGRRESRDASVATEPYYPLVTRSRTLPQATSDGALIR
                     QVAVELWDEAKLGEPVRLLGVSLSNLERGAGGSQLELFAAPKSALGKTLDAITERFGE
                     RAISRAVGHTEKLTPGRTRKRGT"
     gene            complement(10133..11860)
                     /locus_tag="VLJ38_17895"
     CDS             complement(10133..11860)
                     /locus_tag="VLJ38_17895"
                     /EC_number="1.14.16.-"
                     /inference="COORDINATES: protein motif:HMM:NF010657.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0009072 - aromatic amino acid metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid hydroxylase"
                     /protein_id="HSU41458.1"
                     /translation="MTAVDARVPAHLRRFVVAQDYAEYTAVDQAVWRFVLLQMRARLG
                     DSAHPAYREGLSQTGISVDRIPSIAEMNERLARFGWGAVCVDGFIPPRAFQEFQARGL
                     LPIAADMRTREHLVYTPAPDIIHEAAGHAPILPEPAYAAYLRRIGEIGKRAFTVPEED
                     RVFQASYALSEVKEDPNASPASVARVEHDLAAAVSSVPEDSEASWLSRLYWWTAEYGL
                     VGEVSNYRMYGAGLLSSLGESYSCHGPGVKKSPLDERCIHVGYDITRPQPELFVARDF
                     EQLHDVLERVSKLLAVELGGAVALERAERSHELASLRFSSGAWAMGVLREVGPRREEP
                     AWLWLGGPGMIAWDGRIHELEAELRPSELWLVTGPLASGERLETLGSEALARHVDASG
                     RATFRFRSGASVTGRFRRALRALDERLLHVELDDVRLELPGRAPVELATYALVPLGEF
                     VTAHAGAVDPTYHGETAFPDVRVPKPRSRSAREQDLTRLYARVADAPRGAAALDELLA
                     VHGELERDYPHEWLLRWNLLERLAKLPQAESLARRIASELEALEGFYERREPIAMGLK
                     FLASESARA"
BASE COUNT         1986 a         4121 c         4196 g         1798 t
ORIGIN      
        1 ggccgaggtc gggctcggct ccgccgcacc aaacgatgcg ctcgatgcgc agcggcgctt
       61 ccggtcgccg ctcgacgacg aacagcgagc cctccaccaa agtcggcccg cagagccctt
      121 gggcgcgcac ttcgaggcgc cgaaacgcct ggtccatcgc cgctatctcc gcggccgtga
      181 acgtcgcccg caagacgacg tatccctcgc tccaaaactc gtgctgctgc gcttcggtaa
      241 gcacgctgaa agcgtagcgc gcccggccca aaccctcaaa aaacccgcac aatcggcgcg
      301 cgccgacgtg gcgccaggct acgtcttcga catgagcccg cgcgcgatgg tctgaagctg
      361 catgttggtc gtgccttcgt agattttgcc gatcttcgca tcgcggtaga gcttctcgac
      421 ggggaactct tgcgtgaagc cgacgccgcc gaagagatcg acggcttgcg acgccgtgcg
      481 ctcggcgact tcggaagcga agagcttggc catggcggcc tcattgacga aatcgtggcc
      541 ggcgtccttg agccgcgccg cgttgtagac gagcaggcgc gccgcctcga tgtcgagagc
      601 caggcgcgcg agctgaaact cgacgccctg aaactccgcg atggttttgc cgaattgttt
      661 gcgctgtcgc acgtagtcga gcgtgtgcgc gagcgcgccc tcggccaagc cgagcatctg
      721 cgcgccgatg ccgatgcgcc cctcgttcag cgtgaggata gcgattttgt agccgcgccc
      781 gagctcgccc agcaggtttt cgctcggcac ttcgcagtcg tcgaggacga gctcgcacgt
      841 gctcgaggcc cggatgccga gcttgtgttc ctttttgccg acggtgaagc ccggaaagcc
      901 gcgctcgacg aggaacgccg tgatgccctt gtagccctga ctcggatcgg cgttcgcgaa
      961 cacgacgaaa agcgagctct cggcggcgtt cgtgatccag agctttcggc cgttcaagac
     1021 ccagcgatcc ccacggcgct ccgcgcgcgc tttcaaggcg aacgcgtccg aaccggagcc
     1081 cgcctcgctg agcgcgtacg aaccgaccca ttcgctcgct agcttgccga ggtagcgctc
     1141 cttctgcgcg tcggtgcccc agcgcaagag cgcgttgttg acgagcgtgt tctgcacgtc
     1201 gacgacgacg gaaaccgagg gatcgacgcg cgcgagcgcc tgcacggcca agatcgcgct
     1261 gaagaagctc gagccgccgc cgccgcgctc gctcggggtt tcgatgccca tcaagccgag
     1321 ctcgaacagg ccgcgtaaga cgccggggtc gagcgtgctc gccgcgtcca tcgacgacac
     1381 ccggggcgcg acgcgctcgc gcgcgaaggc gagcacggtg tcgaaaaaca ttcgttcgtc
     1441 ttcgctcaaa atcgtgagag gcgtcatcgg ttcacgcgcg ggttcgaggg gccgcatagt
     1501 agcaaccgtg ctctcgccgt gcgaaactcg aacgcgagat gtccggaaat agcttcggtc
     1561 aggcattccg cgtcacgacc gcgggcgaat cccacggtcc tggcaacgtc gtcatcatcg
     1621 acggctgccc cgcgggcatt cccctcggcg tcgaggattt ggccgaggat ctcggccgcc
     1681 ggcgccccgg ccagagccac ctcgtcacgc agcgcaaaga ggcggacgtg cccgaaattc
     1741 tggccggcgt gttcgagggc aagacgaccg gcacgagcat ttcgatcctg atccgcaatc
     1801 aggatcagaa gagtcgcgac tacgacgaca tcaaagacaa atatcgtccg ggccacgccg
     1861 atttcacgtt cgatcagaag tacgggcgcc gggactaccg gggcggcggc cgctcgagcg
     1921 cgcgcgaaac ggtggcgcgc gtcgcggcgg gcgccgtcgc caagaaggtg atcgcgctcg
     1981 gcttcggcgg acgcgtcacg ggctacgtga agcaggtagg tcacctcgtc gccgatgttc
     2041 ccgacccggc cagcgtcacg ctcgaccaag tcgagcgcct gcccgacggc agtccgaacc
     2101 tcgtgcgctg cccggacgca gcgtgcgtgc cgcgcatgat cgagctgatc gagagtttgc
     2161 gcaaagatca ggactcgatc ggcggcgtca gcgaaatcgt ggcggtcggc gtgcccgccg
     2221 ggctcgggga gcccgtgttc gacaagctca aggccgatct cgccaaagcg cttttcagcc
     2281 tgcccgccgt gctcggcgtg gagtacggca tcggcttcgg ctgcgcgacg ctgcgcggca
     2341 gcgaaaataa cgacgcgttc ttcgtccatg cgagcggcga gagcaagcgc gtgtccaccc
     2401 gcaccaaccg ccacggcggc atgctcggcg gcatctcctc cggcatgccg atcgtgctgc
     2461 gcgccgcggt caaaccgacg agcagcttgc cccgcgaaca ggagacggtc acgacggaag
     2521 gcgaaccgac gacgattcgc acgcgcggcc gacacgatcc gtgtttgctt ccacgcttcg
     2581 tgccgatggg cgaggcaatg gtcgcgctcg tgctcgccga tcactggctt cgctcatgtg
     2641 cgcagaagta cgcgctcccg cgttagagtg cgcgctcggg tgtttacgtc ccactaatcg
     2701 acttccatac gcggaaaagt gcgcgtagag catgctagtt ttaaactccc atgctcctgc
     2761 gctcgcgtgt tgttttgaca ctcgcctggg tcgcgacagc gtgcgcgacc gccactgaag
     2821 ctgatcagga cagcgtaccg atcgaggtcg ggagcggcgg cagcgccggg gccgcgagta
     2881 ccggctcggg cggagactcc tcgagcggcg cgacgggggg cgacacgagt ggaatcggcg
     2941 gcagttcgag cggcaacgcg ggctccggcg gcgattcggg catggtgcac gcagtcggcg
     3001 gcagcgccgg catggcgagc ggcggcacgg gcgcgatggg cggcacgggc gcgatgggcg
     3061 gcacgggcgc agtcggcgcg atgggcggca cgggcgcagt cggaagcggc ggcacgtccg
     3121 cgggcggccg cgcaggaaga agcggcggcg ggtcggcggg catcgctcaa ggggtcggcg
     3181 gcacggcggg catgggcgtc ggtggcagcg gcgctcgtgg cggcagcgcg ggcgcgggcg
     3241 cgatcggcgg gaagggcggc agcgggtccg gcggcagagt cggcagcggc ggcactctcg
     3301 gcagcggcgg cacgagcagc ggcacggcgg gtcagggcac ggctggcacc ggcacgagcg
     3361 gcagcgcggg aagcggctcg agcagctgcg acccgcccgt gcagacgacg agctgcacgg
     3421 ccgcgagcga cttctgcgcc ggctacgcgt acatgccgaa cgacgtgtgc ctcgcgacct
     3481 gcgcggtcgg tacggccggt tgcattcaaa atcgcaagat gctcttcaaa tgcgtagcga
     3541 attgcacggc gcagacgccg ggcaccggca ccgacgcgtc gacctggtcg atcgtcaatc
     3601 agtgcaacta gtgcccctca aatgcatcgt tagttacggg acgcggcact agccggcgcg
     3661 cgtcagatgg cgagcgcagg tttgcccccg gcgcgcagct ttcgcagggt cttttcgacc
     3721 tcgaggacgg cacgggccgg gagcggcgcg tagtcgagcg cgggcgcgaa ccgctgtccc
     3781 tcgtgcacgc cccaccaaat gaactgcgcc agcgcctcgc cgcggcgtgc gtccaccgca
     3841 tgttcgtaga cgagcaagta cgtgtacgcg gcgagtgggt acgcctgtgg attcgtcgct
     3901 ccttcgagcg tcgcttgcaa cgtcacgggt agctcgaccg tgtccgccgc tgacagcgcc
     3961 gctgcagccg acggcgcgac gaactcgccc gcgcgattcc gaatggccgc tcgcggcagc
     4021 ccaccctgcg tcgcgtaggc gagctcggtg tacccaatcg aacccggtgt cgcctggagc
     4081 tggccggaga cgccctcgtt acctttcgcg ccgagaccga ctgcgaagcg aacgttcttg
     4141 ccggcgccgg cgcgctcgcg ccagcctggg ctcgatgccg cgagaaaccg cgtaaatatc
     4201 gcggtggtac cgctaccgtc cgtgcgaaag acgacggtga tcggaagatc gggcaaggcg
     4261 gcacccggat tcacgagcgc gagcgctcgg tcgttccagc gcgtgatcgc gccgaggtag
     4321 atcgcagaca agagctcggg ggtgaggcgt aggggcgtgg tgagctcggg caggttgtaa
     4381 ctcacgacga cgcagccgac cgccgtgggc acgtgcacga tgggacccgt ggcgccgcgt
     4441 tcctcgtccg gttccgcggg cacgtcgctc gcgccgaagt cgaccgtgcc ggcaacgatc
     4501 tggcgtacgc cgccgccgga gccgatcgat tggtagttga tgcggacgtt ggggctgacg
     4561 ccgcggtact cgtcgatcca cttggtgtag agcgggtacg ggaaggtcgc gccggcgccg
     4621 ttcaacgcca ccgtgccgtc gttcgagcag gccacgacca tgctcgaacc gagccagccc
     4681 agaacgtgac ggcgagtgca cgacagcacc ccatcgacgc ctgcctagct cggggggcgt
     4741 acgaacgtcg ttcgtgtgac gattcggtga ctaaagccga acctccacgc tgcgtccgct
     4801 atgctgaatc cactccctcc atgcgcaaag tcttcgaaaa tcgctgggtt ctcgtcacgg
     4861 gcgcctcgtc cggcctcggc gaagagcttg ccaaacgact ggctcagcac ggcgcgcacc
     4921 tcgtgctcac ggctcgacgc gaggatcggc tcgaaaacct cgccgctgac ctgcggcgcg
     4981 tcaacggcac cgatacggtc gtcattccgg ccgatctcgc gcgtcctgac ggcgccgagc
     5041 gcgtcctcac cgcattgcgc gagcgcaaca tcacgatctc acacctcgtc aacaatgcgg
     5101 ggttcggcag cgccggcgca ttcagtgagc tcgatcccga gcgcgagagc gcgatggtcg
     5161 agctcaacgt cggcgccgtc gtgcgactca cgcgcggact tttggggcca atgctgcgtg
     5221 ccgcggacgg cggcgtgctc aacgtagcgt ccaccgcagg ccttcagccc gtacctttca
     5281 tggccacgta tgccgccagc aaggcgttcg tcgtaaactt cacgctcgcg ctcgctgccg
     5341 agctcgaggg caccggcgtg cgcgcgatgg cgctctgccc cgggccggtc cagacgggtt
     5401 ttcaagcggc tgcgggtttt cagcggccgg cgttgccgtt cgcggtgctc acgccgaacc
     5461 ggacgattcg tggtgcgctc gcggcctacg aacgcgggga gcacgtttat acgcccggtc
     5521 tcgtgaacgg cgtccaagcg ctcgcagcgc gtgtgctgcc acacggcgtc ctcacctggg
     5581 ccgcctcgcg tacgatgcgc cgcctgggcc gcgcaccggc gaagctcggc tcgaagggct
     5641 gacacacgag cgcgacgcgc ggaccgccgc tcgaacggct acgcgagctg gcagccgcac
     5701 ggggcgctca gtgcagcgtg tgccaggtgc cgtcgtgctg aacgcgcggc acgtcgattt
     5761 cactcggcgc tccggagggc agcggcgtcg cggtctctgc cggagcgcgt tggagcacga
     5821 tgtgaatgcg cgcattctcc tccagcttgc gcagccggtc ctcgcgcgct tcgtcctgcg
     5881 cccagcgcgc gagcgtcgcc ttggagcgcg cgcgtcgctt gcgccagccc caaacgaaga
     5941 gcgccatcac gccggcccac acgaccgtac cgctgcacag gatgggccag aacgtgtacc
     6001 gcttcgcgac ggcttcgcgc cattcgtgtt cgagcgtgac gagatcgacg ccgtacgctt
     6061 ggcgcgcggc gtgatcgagc gtgctgccgt caccgagctc ggcgacgagc gcgcgaaagc
     6121 ggtgccgatc ctcgcgtcga atcaagaacc gcagcacgtc cgcggcctcg gcgtacgcga
     6181 tggaggcctt gttctcgtcg ctcgggaacg agcgctcgac ctgagcgagc ggtaacagtc
     6241 gatcggaaat ggtcgcggtc gagagcgtcc acatccgctc gaacgacgtt tcgccggagg
     6301 ccatgacggc aaagccttcg ttgaaccagc gcgggatcgg gtgcggaccg acggcatccg
     6361 tcagcgcgac gtgcgcgagc tcgtgccgaa aaacttgcgc cagatccaag ctttcattgg
     6421 gaaaacgcgg cgtgagcgtg agcagcacga gcccgagctc ggggtaggcg acgcccgacg
     6481 cgtactccgg gtacggcgcg ccacgcgggg cgaacgtctg catctcgccc ggcgtccgcg
     6541 ccacgtcgac gcgcactttg ccgagcacgg gccggccgag ccaatcttcg agctcgcgct
     6601 tggcgtcgtc ggcggcggtg atgagcggat caatgcgctc gcgcgagctc gggtgataag
     6661 tgatgcggat ccagccgcca tcgtaggtgc tgaagcccgc cgcgacggcg gggatcttcg
     6721 cgtgctcttc accgagacgc ggcgcgtcgg cgggctgcgc gtcgcgcgcc gtcgtgtcga
     6781 ccaccggagg ctcgatggcg tgcgacgagg gaccgctgag ctcggtatga cccgtgcgtt
     6841 cgcgcggctg cgcgtcgggt gcctctaccg cgctcgcgct gcccccgaaa aggagcagcg
     6901 tgaggagcag gagcaagcgc gaaacgacgc gaaccatggt gcgaatcggc cgcgggcgcc
     6961 gctcggcggt ctccaaaacc taagaacagg aacccgctca gtcaactcgg gaccgtgcac
     7021 gtgcctagag ccaggcggcc ggaccaccga ggacgggggc tcgctcccgg attttgaccc
     7081 gcacgtcccc acgcgcggcg aaaaagccga cgaggacgag aagcacccac gcgaacacac
     7141 ctgcacgtct cgccagcgcc acgacccgag gcgagtcgag cgcccgatcg gcgagggtcg
     7201 cgacgatgag cacgcgggcc acgtcgagca cgtcggcgcc gtacgcctcg gatgccccgg
     7261 cgcgcaagac gacgaggccg aggccgagcg cggcgagcgt gacgagcacc cgcgccgcgc
     7321 tgcgacgcgc cgagctcacg ggcgggccga tgacagcgaa gagccggacc gtgaccacga
     7381 cggagaagag cacgagcaga agcgccagca ctccgaacgt cgcggcgccg agcgggcgat
     7441 gatgcgtgtg aagcttcagc tcttcaccga gcgccatcgc gggcgcggcc gcgagcgcga
     7501 cgccgatgaa cgcgggccgc cacacggccg tgctccggcg cgtcgcgcgt gaaagcacga
     7561 gcaacggtcc gagcacgagc gccgtactgc ccgcgagccc gagccagacg aagccggcgc
     7621 tcgcgcttcc gcccgctact cgacgcacgg ccggcaacgc cacgatagcc gaggcgaggg
     7681 cgcccaccgc gagcgtcgcc gcgacctcgg ccgaccgagg tgctcgagcc gtgtcttcga
     7741 gactcacgcg cccgctgggc tcataccggg cgaagctcga gccgcacgcg atcggcagcg
     7801 ggggcgggca ccatgccctg ctcgagcagc cagcgcacgc cgcgcgcgag cgtctcgcgc
     7861 gcggggcggt gcgtgtaacc gaggccttgc tccgcctttt cgctcgtgac ccagacgtac
     7921 gagtgggcgt agtcgcgcgc gagacggccg gtgagcgtcg gctgcgtgtt cgtgagcttc
     7981 gcgtgaaact cgagcagcca cgcgaagaac gcgatcgtga gcggcccctt cggctcgctc
     8041 ggttccgcga gacccgtgat gtcggccagc atctggaaga actgcgtgaa cgtgacgttc
     8101 tcgccgccca agatgtaacg ctcgcccacg tcgccgacct ccatggcacg gatgtgaccg
     8161 agcgccacgt cttcgacgtc gacgaccgag atgccgcccg cggagacggg aacactgaac
     8221 gtcggggaca gcttcaggta ctgaatcaag ctctgaccgt tcggcgtggg tttgtagtcg
     8281 ccggggccga aaacggcggt cggcaagacg ctcacgatcg gcatgccgtc gcctacgagc
     8341 tcctgcacga tacgatcggc ttcgagcttc gcttgaacgt acggctccgg atcgacgaga
     8401 ttgtactcgt gcgtctcgtc catcgcttcg ggagtcgaga tcgtgccgag tacggcggcg
     8461 ctgctcgtga cgacgaggtt ctcgatgccg cgttcgcgag ccgctcctag cgtcgcgcgc
     8521 atgccttggg tggtcgcgtc gatcacgcgc tgcggatgac gcggcatgta ctgaaacggc
     8581 gcggcgacgt gatagagctg cgagcaaccg gcgagcgccc tatacacggt gtgctccacc
     8641 gtgacgtcac cgaacgccaa ctggcagcgg tcctggggca gcccctcgag cccgcgcagg
     8701 tccgctcccg cgcgcacgaa ggctttcacc ttctcgccgc gttcgacgag cttgcgcacg
     8761 agcgtgccgc cgatgagacc ggtggcgccg gtcaccaaaa tccaagggtt tttcatcgag
     8821 ccatggctct tagaccaggc ggctacggct gccaagccag ccttccgcgc ggaaagggcg
     8881 gaaccgggct cgcctcggag ttaggctcgt aagcttcccg tgacctccgc ggccgagcgc
     8941 tggattttgc atgcagacat ggacgccttc tacgcgtcca tcgagcagcg cgatcacccc
     9001 gagctccgcg gcaagcccgt gatcgtcggg gcttcgtcga agcgcggcgt cgtcgccgcg
     9061 gcttcttacg aggcgcgcgt cttcggcgtg cgctcggcga tgcccgggtt ccgggcgcgc
     9121 gagctctgtc ccgacggcgt ctttttacct tcgaacatgg cccactacgt cgcggtgtcg
     9181 gcggaggtgc acgcggtatt cgagcgcttc acgcccgaga tcgagccgat cgcgctcgat
     9241 gaagcgttcc tcgacatcac gggctcactc gcgctcttcg gagcgccgca aaagctcgcc
     9301 gccgagctca agcgcgccgt gcgcgaagcg acggcgctca acgtctcggt cgggctcgcg
     9361 ccgaacaagc tcgtcgccaa gctcgcctgc acgctcggca agcccgacgg gctcaaggtg
     9421 atcgagccgc acgaggtgcg cgcgttcgtc gatccgctgc cgattcggcg gctctggggc
     9481 gtgggccccg tgctcggcgc gaagctcgcg tcgctcggcg tcgagacctt ttccgacctg
     9541 tcgagctacc atccgaacga gctcgcgaac gcgctcggcg agcgcggagc ggagctgcag
     9601 cgcctcgcgc ggggcgagga cgatcgcccg gtgctcgcct accgcgaacc gaaatcctac
     9661 ggcgaggaga gcacgttcga gagcgacgtg agcgaccgca cgcgcgtgac agccgcgctg
     9721 acggagcacg ccgaaacggt agcgcggcgc ttgcgtcacg acgactacgc agggcgcacg
     9781 gtgacgatca aggcgaagct tggccgcgcg cgcgggcggc gtgaatcgcg agacgccagc
     9841 gtggcaacgg agccgtatta cccactcgtc acgcgcagcc gcacgctgcc gcaggcgacg
     9901 agcgacggcg cgctcatccg gcaagtcgcc gtcgagctct gggacgaggc gaagctcggc
     9961 gagccggtac gcctgctcgg ggtttcgctc tcgaacctgg agcgcggcgc cggcggctcg
    10021 cagctcgagc tcttcgcggc gccgaagagc gcgctcggca agacgctcga cgccatcacc
    10081 gagcgcttcg gcgaacgcgc catctcgcgc gccgtcggac acaccgaaaa gctcacgccc
    10141 gggcggactc ggaagcgagg aacttgagtc ccatggcgat cggctcgcgc cgctcgtaga
    10201 acccttcgag cgcctcgagt tcgctggcga tgcgccgcgc gagcgactcc gcctgcggca
    10261 gcttcgcgag ccgctcgagc aagttccagc gcaggagcca ttcgtgcggg taatcgcgct
    10321 cgagctcgcc gtgcacggcg agcagctcgt ccaacgctgc cgcaccgcgc ggagcgtcgg
    10381 cgacgcgcgc ataaagtcgc gtcaggtctt gctcacgcgc cgagcggctg cgcggcttcg
    10441 gcacgcgcac gtcggggaac gccgtttcac cgtggtacgt cggatcgacc gcgccggcgt
    10501 gcgccgtcac gaactcgccg agcggcacga gcgcatacgt cgcgagctcg accggagcgc
    10561 gcccgggcag ctcgagccgc acgtcgtcga gctcgacgtg aaggagccgt tcgtcgaggg
    10621 cgcgcagcgc gcggcggaag cgccccgtga cggacgcgcc gctgcggaag cgaaacgtcg
    10681 cgcgcccgct cgcgtccacg tgccgcgcga gcgcttccga cccgagcgtt tcgagccgtt
    10741 ccccgctcgc gagcggccct gtcacgagcc aaagctcgct cggccggagc tcggcttcta
    10801 gctcgtgaat gcgcccgtcc cacgcgatca tgccgggccc gccgagccag agccacgccg
    10861 gctcttcgcg acgcggcccc acttcacgga ggacgcccat ggcccaggct cccgaggaaa
    10921 agcgcaggct cgcgagctcg tggctccgct ccgcgcgttc gagcgcgacc gcgccgccga
    10981 gctcgacggc gagcagtttc gacacgcgct cgagcacgtc gtgcagctgc tcgaagtcgc
    11041 gggcgacgaa gagctcgggc tgcgggcgcg tgatgtcgta gcccacgtga atgcagcgct
    11101 cgtcgagtgg gctctttttg acgcccggcc catggcacga gtagctctcg ccgagcgacg
    11161 acaggagtcc cgcgccgtac atgcgataat tcgagacctc gccgacgagc ccgtactcgg
    11221 cggtccacca atacaagcgc gaaagccagg acgcttcgct gtcttcgggc acgctcgaca
    11281 cggcggcggc gaggtcgtgc tcgacgcgcg cgacgctcgc gggcgacgca ttcggatctt
    11341 ctttgacttc gctgagcgcg tagctcgcct gaaagacgcg atcctcttcc ggcacggtga
    11401 aggcgcgctt gccgatttct ccgatgcggc ggagatacgc cgcgtacgcg ggctccggca
    11461 ggattggcgc gtgtccggcc gcttcgtgga tgatgtcggg cgcaggcgtg tagaccaagt
    11521 gctcgcgcgt gcgcatgtcc gcggcgatgg gcaaaagccc gcgcgcttga aattcctgga
    11581 acgcacgcgg cggaatgaag ccgtcgacgc agacggcgcc ccagccgaag cgtgcgagcc
    11641 gttcgttcat ctccgcgatg ctcggaatgc gatcgaccga aatgcccgtc tgcgacagtc
    11701 cctcacggta tgcggggtga gcggagtcgc cgaggcgcgc gcgcatctgg agcagcacga
    11761 acctccagac cgcttggtcc acggccgtgt actccgcgta gtcttgtgcc acgacgaagc
    11821 ggcggaggtg cgccggaact cgagcatcga cggcggtcac ctacgaatac tagcgccaaa
    11881 cacgcgaagc gggagcgtgc gggggcgagc tgccgctcgc gtgagggcgc accgcgtgac
    11941 gcgcctggac gtgaagcgcg cgtcgcgcga acgcgtcgtg gcgctcatgc gttttagcga
    12001 cgttgtaggc gacgcgagag cgctctactc ttcgagcatg cgactcggga cgctcaggga
    12061 cggcacgcac gacggcaagc tcgtcgtggt cgctcccggg g
//
LOCUS       DATIML010001034         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2529029, whole genome shotgun sequence.
ACCESSION   DATIML010001034 DATIML010000000
VERSION     DATIML010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2529029"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..1630)
                     /locus_tag="VLJ38_17900"
     CDS             complement(50..1630)
                     /locus_tag="VLJ38_17900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41459.1"
                     /translation="MPPTFPHTLVKSVAFTNYSGVIRNRAVPVYCTPEGGTDASVLRR
                     HGDAVRAILGYVFEQNPPATLRTVGSTWSFSNLIEPGSVVLDPVNFTFVERVPAEFFT
                     QGYQDRSARGFVPLFVEGGTQIGALNRRLGADLGLALQTSGAADGQRVAGALATGTHG
                     AALQVGALHDTVLGLYLVVAPNQAVFVQSGSAQFASSEIAPWLEEQTGIPTRHEADDT
                     LFRAALVALGSLGVVFGVVLEATPLYRLKFKSLARPHDDASVWQAIRTLDTSPLHPET
                     VLHPYHFNVTMHPYPERGALGLVATLMWKVPPGGIAFDSPRPGIPRASTDLMSFIGGL
                     TQALGGPVAAPLEHALLARMISEQLHLHDGTGDGFPGHMFGPTSLPPGAGASTELVVD
                     HVDSERALELVFRVLGESASRGDFLLGAVGVRFVPQTQAFLGMNVNAMNTYIELPSIR
                     NDGVLRVYEALWDGFEQAGIPFTCHWGQLGGMNETRLRRYFGGRVDAWRSARARLLDP
                     VGQRVFEAALLRDVGLAS"
     gene            complement(1638..1958)
                     /locus_tag="VLJ38_17905"
     CDS             complement(1638..1958)
                     /locus_tag="VLJ38_17905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41460.1"
                     /translation="MLKLGGRVGWVVIAWGVAGCSHHDVSLKFPDTSPGEEYVCYGGG
                     SDAEACSPQARTDPSKDNREGTIYVIVPHACKGHVNEITIHGAGSSKPIIDVKCAPLE
                     NKIQ"
BASE COUNT          338 a          670 c          684 g          314 t
ORIGIN      
        1 cggatttttt gcaccagggc tacgcggccg ctcgtagggc gtcgccgcgc tagctcgcga
       61 gacccacgtc gcggaggagg gccgcctcga acacgcgctg gccgacggga tcgagcagcc
      121 gggcgcgtgc gctcctccag gcgtcgacgc gcccgccgaa atagcgacgc agtcgcgtct
      181 cgttcatgcc gccgagctgt ccccaatggc acgtgaaggg aatgcccgcc tgttcgaagc
      241 cgtcccagag cgcctcgtac acgcggagca cgccgtcgtt gcgaatgctc ggcagctcga
      301 tgtacgtgtt catcgcgttc acgttcatgc cgagaaacgc ttgcgtctgc ggcacgaagc
      361 gtacgcccac ggcgcccagc aaaaaatcgc cgcggctcgc gctttcgccg agcacgcgga
      421 agacgagctc gagcgcgcgc tcggaatcta cgtgatcgac gacgagctcg gtgctcgcgc
      481 cggcaccggg cggcagtgac gtgggcccga acatgtgccc gggaaagccg tcacccgttc
      541 cgtcgtgcag gtggagttgt tcggagatca tgcgtgcgag cagggcgtgc tcgagcggcg
      601 ccgcgaccgg cccgccgagc gcctgcgtca agccgccgat gaagctcatc aaatccgtcg
      661 aagcgcgcgg aatgccgggg cgcggcgaat cgaacgctat gccaccgggg gggaccttcc
      721 acatcagcgt ggcgacgagg ccgagcgcgc cgcgctctgg gtaggggtgc atcgtcacgt
      781 tgaagtgata cgggtggagc acggtctcgg gatggagcgg gctcgtgtcg agcgtgcgga
      841 tcgcttgcca cacgctcgca tcgtcgtgcg ggcgagcgag gctcttgaac ttcaggcgat
      901 agagcggcgt ggcctcgagc acgaccccga acacgacgcc cagcgagccg agcgcgacga
      961 gcgccgcgcg aaacagcgtg tcgtccgctt cgtgtcgcgt cgggatcccg gtttgctcct
     1021 cgagccacgg cgcgatttcg ctcgaggcga actgcgcgga ccccgattgc acgaacaccg
     1081 cctgattcgg cgccacgacg aggtagagcc cgagcaccgt gtcgtggagc gcgcccactt
     1141 gcaacgccgc gccgtgcgtc cccgtcgcga gcgccccggc gacgcgctgc ccgtcggccg
     1201 cgcccgaggt ttgcagcgcg agccccagat cggcgccgag ccggcgattg agcgcaccga
     1261 tttgcgtgcc gccctcgacg aagagcggca cgaagccgcg agcgctgcgg tcctgatagc
     1321 cttgggtgaa gaactcggcg ggcacgcgct cgacgaacgt gaaattcacc ggatcgagca
     1381 cgacgctgcc gggctcgatc aaattcgaga acgaccaggt gctgccgacg gtgcggagcg
     1441 tcgccggcgg attttgctcg aagacatagc cgaggatggc gcgaacggcg tcgccgtgcc
     1501 ggcggagcac gctggcatcg gtgccgccct cgggcgtgca gtagacggga accgcacggt
     1561 tcctgatgac ccccgagtag ttcgtgaacg ctacggattt gaccagcgtg tgcggaaacg
     1621 tcggcggcat gtccccctca ttggatcttg ttctcgagcg gcgcgcattt cacgtcgatg
     1681 atcggcttgg acgagcccgc gccatggatc gtgatctcgt tgacgtgtcc cttacaggcg
     1741 tgcggcacga tcacgtaaat ggtgccctcg cgattgtcct tcgacggatc ggttcgagcc
     1801 tgcggcgagc acgcttccgc gtcgctgccg cccccgtaac agacgtactc ctcgcccgga
     1861 gacgtatccg gaaacttgag cgagacatcg tggtgcgagc aaccggcgac gccccacgcg
     1921 atgacgaccc aaccgacgcg cccgccaagc ttcagcatcg gccggacgat agcacacgtt
     1981 tccccgtccg atccttacgt gggtgt
//
LOCUS       DATIML010001035         1556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5133706, whole genome shotgun sequence.
ACCESSION   DATIML010001035 DATIML010000000
VERSION     DATIML010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5133706"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VLJ38_17910"
     CDS             <1..816
                     /locus_tag="VLJ38_17910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41461.1"
                     /translation="AAAALGVTERANAQEILLTGPLAGAPAVRKLRLHRQGRFEVSPS
                     ISFTLLDEYQRTIFFGARLGYNFTDWFQVGVWGGYGAVKMSTYLTDQIQTRNAERLQR
                     PPTDTERRLTAVNLGPDFNDQLGDMNWVVSPQILVTPFRGKLALFQSIYLDTDLYVFG
                     GPAFVGLNERADCTACATNGSDSFAMASRTAITGSFGLGLSFYINHWSALGIEWRFLP
                     MSWNTGGFDTAGGGKDAEFPDNKITSADRRFHFQQMLSISFNMNLPTKIRLSE"
     gene            complement(959..>1556)
                     /locus_tag="VLJ38_17915"
     CDS             complement(959..>1556)
                     /locus_tag="VLJ38_17915"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU41462.1"
                     /translation="KIGDAASAAALLKRFDWVLDPSITDQEEKASALAGIVAAGEAAL
                     DPLRRYCKKAESLTWPLKVLVEIVPAERVPEEMLALLDQFDTEYTRNPEPKVQLLQAL
                     EAYPSEEVRVAIEPFLADASETVRFNAANAVFAVNDPQSVPALVAALDGEESLRVKNR
                     IASGLAERAFVIPEELRAACKQNLPQGYALRGDHVEKS"
BASE COUNT          255 a          520 c          487 g          294 t
ORIGIN      
        1 gcggccgctg cgctcggggt gacggagcga gccaacgctc aagagatcct gctcaccggt
       61 ccgctcgccg gcgctcctgc cgtgcgcaaa cttcgcctgc accgtcaggg gcgtttcgag
      121 gtgagcccgt cgatctcctt cacgctactc gacgaatatc agcgcacgat cttcttcgga
      181 gcgaggctcg gctacaattt caccgactgg tttcaggtcg gcgtctgggg cggctacggc
      241 gccgtcaaga tgagcaccta cctgacggat cagattcaga ccaggaacgc cgagcgcctg
      301 cagcgccctc cgaccgatac ggaacggcgt ctgacggccg tgaacctcgg ccccgacttc
      361 aacgatcagc tcggtgacat gaactgggtc gtgtcgccgc agatcctcgt cacgccgttt
      421 cgcggcaagc tcgctctgtt tcagagcatc tatctcgaca cggatcttta cgtgttcggc
      481 ggcccggcct tcgtcggctt gaacgagcgc gcggactgca cggcgtgcgc tacgaacgga
      541 tcggacagtt tcgcgatggc ttcacgcacc gcgatcacgg gctcgttcgg cctgggcctc
      601 tcgttttata tcaaccactg gagcgcgctc ggcatcgagt ggcgcttcct gccgatgtcg
      661 tggaacaccg gcggcttcga cacggcgggt ggcggcaaag acgccgagtt ccccgacaac
      721 aagatcacga gcgccgatcg acgcttccat ttccaacaga tgctctcgat cagcttcaac
      781 atgaacctgc cgaccaagat ccggctcagc gaatagccga ggttcggtca gttcactcga
      841 gcgcgcgctg tctccacggc gcgcgctcgc ttcattttgg ggcgccgcgt ccgggctggc
      901 ctcgaggcga tcgcgatctt ttcttccacg accgctcgag tcgaattagc gggtcgcgtc
      961 agctcttctc gacgtggtcg ccgcgcagcg cataaccctg cgggagattc tgcttacagg
     1021 cggcacgaag ctcctcggga atgacgaacg cgcgctcggc caagcccgag gcgatgcggt
     1081 ttttgacgcg cagcgactcc tccccgtcga gggctgccac gagcgccggc acgctttgcg
     1141 ggtcgttcac ggcgaagacg gcgttcgcag cgttgaaacg cacggtctcg ctggcgtcgg
     1201 cgaggaacgg ctcgatcgcg acgcgcacct cttccgacgg gtaggcttcg agcgcctgca
     1261 agagctgcac tttgggctcc gggttccgcg tgtattccgt gtcgaactga tcgaggagcg
     1321 cgagcatctc ttcggggacg cgctcggcgg gcacgatttc caccaacacc ttgagcggcc
     1381 aggtcaggct ttcggccttc ttgcagtagc gacgcagcgg atcgagcgcc gcctcacccg
     1441 cggcgacgat ccccgcgagc gccgacgctt tctcctcctg gtcggtgatg gagggatcga
     1501 gcacccagtc gaagcgcttg agcaacgccg cggcgctcgc ggcgtcgcct atcttc
//
LOCUS       DATIML010001036         1814 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5133781, whole genome shotgun sequence.
ACCESSION   DATIML010001036 DATIML010000000
VERSION     DATIML010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5133781"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..693)
                     /locus_tag="VLJ38_17920"
     CDS             complement(112..693)
                     /locus_tag="VLJ38_17920"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HSU41463.1"
                     /translation="MSTRRLPLAAEEPSRPIASAAPLGATAAAIAKDGAKEGDLLQVG
                     DLAKATGKTVRAIHLYEELGLLRAHERSKGRYRLFTSDALIRVRWISKLQNLGLSLSE
                     IQELVREQDGSDSATIAAQKLKEVYVARLGETRRKLEELRELEAELEQSLAYLSACDS
                     ACESQLPVHSCPSCERHPEREHAPELVAAVHVV"
     gene            complement(788..1543)
                     /locus_tag="VLJ38_17925"
     CDS             complement(788..1543)
                     /locus_tag="VLJ38_17925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41464.1"
                     /translation="MSSRRSGARASATRVLVGALWLALVACGGGATEPAPDAGPSGAA
                     GAPDGNRPDPPPDPNLPYATEVVDFEPGAGAGYGQSKLPNVVLGPPSGSGTDHGSLDV
                     LSLGKGGRIVLGFGQFAISDGPGPDLVVFENPFWPGGDASRVYAEPGEVSVSEDGETW
                     LTFPCDGAGDGEGHFAGCAGVTPTLVYDPQSTVPLDPAVTGGDVFDLAAVGLVTANFV
                     QIRDASEFGSAPTAGFDLDAVGIVNALAAGVTP"
     gene            complement(1540..>1814)
                     /locus_tag="VLJ38_17930"
     CDS             complement(1540..>1814)
                     /locus_tag="VLJ38_17930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41465.1"
                     /translation="SNAERYAIRQAPDDAAFNPATFDRVVWTKPDGDHFYYCSVTYGC
                     DTAELTATGDGDDSEDSPNCNLSEVDVSDPENGGCGPFAWTKLTAQ"
BASE COUNT          305 a          615 c          597 g          297 t
ORIGIN      
        1 agcgttaccg aaatcctgcg tgaaatacgg gagcatcgcg tcgagcacgc gcgggtcgag
       61 aggcgtggtc gcgtgattgt cgaggtagat gggtagcttc agggtcatga ctcaaaccac
      121 gtgcacggcg gcgacgagct cgggcgcatg ctcgcgctcg gggtgccgct cacagctcgg
      181 gcaggaatgg acgggcagct gcgactcgca cgccgagtcg caagcgctca ggtacgcgag
      241 gctttgttcg agctcggcct cgagctcacg gagctcctcg agttttcgcc tcgtctcacc
      301 gagacgagcg acgtagactt ccttcagttt ctgcgcggcg atggtcgccg aatccgagcc
      361 gtcctgctcg cgcacgagct cttggatctc cgacagcgac agaccgaggt tttggagctt
      421 cgagatccag cgcacccgga tgagcgcgtc gctcgtgaac aagcggtaac gccccttcga
      481 ccgctcgtga gcgcgaagca acccgagctc ctcgtaaagg tgaatggccc ggacggtctt
      541 gccggtcgcc ttggcgagat cccccacttg caggaggtct ccctctttgg cgccgtcctt
      601 ggcgatcgcg gctgccgtgg cgccgagggg cgcggccgat gcaatcgggc gggagggctc
      661 ttcagcagcc agggggagac ggcgggtaga cattcaactc agtcggtgtg aacccttacg
      721 ttagggttag ggttcagtta gtcctcagag agctggctgt caaccgaccg ttcacgacat
      781 gggcacccta gggcgtgacg ccggccgcga gcgcattcac gatgcccacc gcgtcgaggt
      841 cgaagcccgc cgtcggcgcg ctgccaaact ccgaagcgtc gcgtatttgc acgaaatttg
      901 cggtcacgag acccacggcg gccagatcga aaacatcgcc gcccgtgacc gccgggtcga
      961 gcggcaccgt actctggggg tcgtagacga gcgtcggcgt tacccctgcg cagccagcaa
     1021 agtgcccctc gccgtcgccc gccccatcgc aggggaacgt cagccacgtc tcaccgtcct
     1081 cgctgacgct cacctcgccc ggctccgcgt aaacccggct cgcgtcgcca cccggccaaa
     1141 atggattctc gaacacgacg agatccgggc ccggtccgtc gctgatcgcg aactgaccga
     1201 aaccgagcac gatgcgtccg cccttgccga gcgagagcac gtcgagcgac ccgtgatcgg
     1261 ttccgctccc cgagggcgga ccgagcacga cgttcggcaa cttgctttga ccgtagcctg
     1321 ccccagcccc tggctcgaaa tccacgacct cggtcgcgta gggcaggttc gggtcgggcg
     1381 gcggatccgg cctattaccg tccggcgcgc ctgcggcacc ggacggtcca gcatccggcg
     1441 ccggctccgt ggcgcccccg ccgcacgcga cgagcgcgag ccagagcgcg ccgaccaaga
     1501 cacgcgtcgc ggaagcgcgc gcgccactgc gccgtgagct cattgcgccg tgagcttcgt
     1561 ccacgcgaac ggaccgcagc cgccgttctc ggggtcactc acgtcgacct cggacaagtt
     1621 gcaattcggc gagtcttcgc tgtcgtcgcc gtcgcccgta gcggtgagct cggccgtgtc
     1681 gcagccgtaa gtcaccgagc agtagtagaa atgatcgccg tcgggcttgg tccacacgac
     1741 gcgatcgaac gtagccgggt tgaacgcggc gtcgtcgggc gcctgccgga tcgcgtaacg
     1801 ctcggcgttc gaga
//
LOCUS       DATIML010001037         2328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_509779, whole genome shotgun sequence.
ACCESSION   DATIML010001037 DATIML010000000
VERSION     DATIML010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509779"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..754)
                     /locus_tag="VLJ38_17935"
     CDS             complement(155..754)
                     /locus_tag="VLJ38_17935"
                     /inference="COORDINATES: protein motif:HMM:NF016626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF615 domain-containing protein"
                     /protein_id="HSU41466.1"
                     /translation="MPPRSRAPHDDASLAEEEDLTSRGDLRRANRVVEETLARLTQDL
                     AGLSRRQLALLELPEAVLDAVIGAQAIKSPPARQRQLRLVRIALRSTEWDIISERVRH
                     VLEHGTLPAAATGAEDALAGVEAKWVARLLGEGFMGLDAFLAEFPRADRARLKDLIHR
                     VDRSTHERRVKAERKLADAIRGFLRSSRTVRALPGTKSE"
     gene            complement(802..2223)
                     /locus_tag="VLJ38_17940"
     CDS             complement(802..2223)
                     /locus_tag="VLJ38_17940"
                     /inference="COORDINATES: protein motif:HMM:NF045017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41467.1"
                     /translation="MSKVQNATTMASYFGDFKILMQRAKDFDKPFVVLLEADGFGLLQ
                     QQTSSNPNAYAAIKDTGMAELQALPNTVAGWGLAFLQLRKSVGASKVVLGVHISSWAS
                     GKDVSYFSVTDALGPEVDKVYNFLAPLGVASNVTGSTFDVLVGDPLDRDSDYYRLTQS
                     QDRWWDASDSASIASKSFNRYAEWLRLWNVEANKRWVLWQIPLGNSASLNVYNNGNPG
                     EGYKDNRPEYFFSSGTAHLQKFADVGAIALLFGAGASGQSSYGNDRYSDGQLFMKSRA
                     GAFLNAGGLPLATGSGSGGTGGTGGTGGTGGTGGTGGTSATGGTSGTGGSGDTSRYNF
                     ESGTQSWVTSGGMITRVASSTTRAFAGTHSLAASFSGAAGSQYLRVSSPSAPAGATVT
                     FHVWIPSGSAISALQPYVLQGAAGNWTWTGNYKAAASLTTNAWNTITVAVPTNAAALA
                     ELGVQFTTSATWTGTAYVDAVNW"
BASE COUNT          355 a          767 c          796 g          410 t
ORIGIN      
        1 ttgcgcggac gcccgcgacc cagtcgtggg tacccgggcg atcgcgggca agccgggcga
       61 tcgtgggcac gcgcatgttc cggtgcgttc ggccgggccg cgcgcgatga cacagtgctt
      121 gatgtcgagg tgctctgcgg cttcgcgccg ccgttcactc cgacttcgtg ccgggtaaag
      181 ctcgtacggt gcgcgagctg cgcaagaagc cgcgaatcgc gtcggcgagc ttgcgctcgg
      241 ccttcacgcg ccgctcgtgc gtgctgcggt cgacgcggtg gatgaggtcc ttcaggcgag
      301 cgcggtcggc gcgcgggaac tcggcgagaa aagcgtcgag ccccatgaag ccttcgccga
      361 gcaggcgcgc gacccatttc gcttcgacgc cggcaagcgc gtcttcggcc ccggtcgctg
      421 ccgcgggcaa cgtgccgtgc tcgagcacgt gacgcacacg ctccgagatg atgtcccact
      481 cggtgctgcg gagagcgatc cgaacgaggc ggagctggcg ctggcgagcg ggcgggctct
      541 tgatcgcctg cgcgccgatg acggcgtcga gcaccgcttc gggcagctcg agcaacgcga
      601 gctgccggcg gctgaggcca gcgagatctt gcgtcaggcg agcgagcgtc tcttcgacca
      661 cgcggttggc gcggcggagg tcgccccgcg acgtgagatc ctcctcctct gcgagggaag
      721 cgtcgtcgtg gggagctctg gagcgcggcg gcataccctc ctctacaccg ccgcgcagcc
      781 gccgtgatca gcgaatcggc gtcaccagtt gacggcgtcc acgtacgccg tgcccgtcca
      841 ggtcgcgctg gtcgtgaatt gcacgccaag ctcggcgagt gccgcggcgt tcgtgggaac
      901 ggcgaccgtg atggtgttcc aggcgttggt ggtgaggctc gccgccgcct tgtagttgcc
      961 ggtccaggtc cagttgcccg ctgcgccctg cagcacgtac ggttgaagcg cgctgatcgc
     1021 gctgccgctc gggatccaga cgtggaacgt gaccgtcgcg cccgcggggg cggacggtga
     1081 gctcactcgc aggtactgac tgccagcggc accgctgaag ctcgcggcga gtgaatgcgt
     1141 gcctgcgaaa gcgcgcgtcg tggagcttgc gacgcgggtg atcattccgc cgctcgtcac
     1201 ccacgactgc gtgccgctct cgaagttgta gcgcgacgta tcgcccgagc cgcccgtacc
     1261 cgacgtaccg ccggtggccg acgtaccgcc cgtacctccg gtgccgcccg tacctccggt
     1321 cccgcccgta cctccggtcc cgcccgagcc gctcccggtc gcgagcggca agccgcccgc
     1381 attgagaaac gcgcccgcgc ggctcttcat gaacaattgg ccgtcgctgt agcggtcgtt
     1441 gccatacgag ctctgtccgc tcgcgccggc tccgaagagc agcgcgatgg cgcccacatc
     1501 ggcgaatttt tgcaggtgcg ccgtgccgct gctgaagaag tactcgggac ggttgtcctt
     1561 gtagccttcg ccggggttgc cgttgttgta gacgttcaga ctcgcggagt tgccgagcgg
     1621 gatttgccag agcacccaac gtttgtttgc ttcgacgttc cagagcctga gccactcggc
     1681 gtagcggttg aagctcttcg aagcaatcga ggcggaatcg ctcgcgtccc accagcgatc
     1741 ctggctttgc gtgagccggt agtaatcgga gtcacgatcc agcggatcgc ccacgagcac
     1801 gtcgaaggtc gagccggtca cgttgctcgc gacgccgagc ggcgcaagga agttatagac
     1861 cttgtcgact tcggggccga gcgcgtcggt cacgctgaag taggagacgt ccttgcccga
     1921 agcccaactc gagatgtgga cgccgagcac gaccttgctc gcgccgaccg atttcctgag
     1981 ctgcaagaac gcaagccccc agcccgcgac cgtgttcggc agagcctgga gctccgccat
     2041 gcccgtgtcc ttgatggcgg cataggcgtt gggattgctt gaggtctgct gttgcaacaa
     2101 gccgaagccg tcggcttcga gcagcacgac gaacggcttg tcgaagtcct tggctcgctg
     2161 catcaggatt ttgaaatccc cgaaatacga ggccatcgtg gtggcgttct ggaccttgct
     2221 caagaacgcc gactcgccgc cgccggcctc cccgttgatc tggtattact gggcgactgg
     2281 cacgtagtgc tgggtgtcgc actcgcgcag gtacgaaagg ccccaaga
//
LOCUS       DATIML010001038         1890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5134050, whole genome shotgun sequence.
ACCESSION   DATIML010001038 DATIML010000000
VERSION     DATIML010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5134050"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /locus_tag="VLJ38_17945"
     CDS             complement(<1..449)
                     /locus_tag="VLJ38_17945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41468.1"
                     /translation="MSQAAAGRSQPSYGGSNDAYADLLSGTRRLQLEQRAAREAWLAA
                     LALEGKDDLLFELEVLLKAAACFSNPRNHPGPPRRSAIVAHDFRPALQVFHDGLERAV
                     SLARQLLGPLDRAFVFHRYLGTVLPEDSARARLLAEGASQQTPGGSL"
     gene            complement(478..1053)
                     /locus_tag="VLJ38_17950"
     CDS             complement(478..1053)
                     /locus_tag="VLJ38_17950"
                     /inference="COORDINATES: protein motif:HMM:NF033768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AgmX/PglI C-terminal domain-containing protein"
                     /protein_id="HSU41469.1"
                     /translation="MTRFAAASALALVSLTLGCGGSSTPAQTASQPTTAAPAAEPAPA
                     AASPAAPANDGWEGEGEAKGNAATPAATSESKPVAAGSKQPEETRTVEVITKVIKARR
                     ADIRQQCYEPARKDLPSLQGDMVIHLVIDPAGKVKTAELNLERSTLKSAAVVDCATKM
                     LKAIDFPASSRGLETVVNYPFNFMPGGPAPR"
     gene            complement(1137..1721)
                     /locus_tag="VLJ38_17955"
     CDS             complement(1137..1721)
                     /locus_tag="VLJ38_17955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSU41470.1"
                     /translation="MAEGRDVLSLPVLLLNRHFVPVSVATARRAFVLLYGGAARALDD
                     DGDTYDFDTWFHLPLRNTDDPLPVIGGAVRVPRVLHLTRYERAPRFSVRLTRRNLMIR
                     DQYQCQYCGKRPNQRDLNLDHVVPRSRGGQDSWENLVVSCRGCNLKKGRRTPQEAGML
                     LLRSPHVPKWSTATQILLVTREPYRQWEPFLKAG"
BASE COUNT          294 a          610 c          672 g          314 t
ORIGIN      
        1 atcaggctgc cacccggcgt ctgttgcgag gcaccctcgg cgagcaggcg ggcgcgcgcg
       61 ctgtcctctg gcaaaacggt gccgaggtag cgatggaaga cgaaagcgcg atcgagcggc
      121 ccgagcagct ggcgggcgag gcttaccgcg cgctcgaggc cgtcgtggaa gacttggagc
      181 gcgggcctga agtcgtgcgc gacgatggcg gagcggcgcg gggggcccgg gtgattgcgc
      241 gggttcgaga agcacgcggc cgccttgagc agcacctcga gctcgaacaa gaggtcgtcc
      301 ttgccctcga gcgcgagggc ggcgagccag gcttcgcgcg cggcgcgctg ctcgagctgc
      361 aggcggcgcg ttccgctcaa gagatccgcg taggcgtcgt tggaaccgcc gtacgacggc
      421 tgtgagcggc ccgcggcggc ttggctcata cgcgtgcttt cgggggagcg cgcgccttca
      481 gcgcggcgcc ggtccgcccg gcatgaagtt gaacgggtag ttgacgaccg tttcgagccc
      541 gcgtgacgag gccggaaaat cgatcgcttt gagcatcttc gtcgcgcaat cgacgaccgc
      601 cgctgacttc aacgtcgagc gttcgaggtt cagctcggcc gtcttcactt tgcccgcggg
      661 atcgatcacg aggtgaatca ccatgtcgcc ttgcagcgac ggcaagtcct tgcgcgccgg
      721 ctcgtaacat tgctgccgaa tgtcggcgcg gcgagccttg atgaccttcg tgatcacttc
      781 gaccgtgcgg gtttcctcgg gttgtttgga accggccgcg accggcttgc tctcggacgt
      841 ggcagcgggg gtcgcggcgt tgcctttggc ttcgccttcg ccttcccagc cgtcgttcgc
      901 gggcgctgcc gggcttgcgg ccgcgggcgc aggctcggca gcgggcgcgg cggtcgtcgg
      961 ttgcgacgca gtttgagcgg gcgtcgaact gccgccacag ccgagcgtga gagagaccag
     1021 cgcgagcgcg gacgcagccg caaagcgtgt catccgcagc atcgtaggcg aagcgccgtc
     1081 tcgaacgcca gccgccgaag cgctgccgaa tcagcccagg ccgggcctcg gcgccctcag
     1141 ccggccttga ggaacggttc ccactggcgg tagggctcgc gcgtcacgag gaggatctgg
     1201 gtcgcggtcg accacttggg cacgtgggga ctgcggagca gcaacatgcc cgcttcctgc
     1261 ggcgtgcggc ggcccttctt caggttgcag ccgcgacaag acaccacgag attttcccag
     1321 gagtcttgcc cgccgcgcga gcgcgggacg acgtgatcga ggttcaaatc gcgctggttc
     1381 ggccgcttgc cgcagtactg gcactgatac tgatcgcgga tcatcagatt gcggcgcgtg
     1441 agacgcacgc tgaagcgcgg cgctcgctcg tagcgcgtga ggtgcaaaac acgcggcacg
     1501 cggacggcgc cgccgatgac cggtagcgga tcgtccgtgt tgcgcagcgg caagtgaaac
     1561 caggtgtcga agtcgtacgt gtcgccgtcg tcatcgaggg cgcgcgcggc acccccgtag
     1621 agcagcacga aagcccgcct cgccgtcgct acgctcaccg gcacgaaatg ccggttcaag
     1681 agcaggaccg ggaggctcag tacatcccgc ccttcggcca tgctcggagt ctccacgtgc
     1741 acgggtaatc agactagcat ttccggggct cccaggcgtc cgaagccggc tttcgttggc
     1801 gtcgccgtgg ttgtgagcta ctagcgaggc cacctaccgg cattccaagt gacgaaaccg
     1861 tgcattttcg ctctacgcgt cgccctcggc
//
LOCUS       DATIML010001039         4816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4262587, whole genome shotgun sequence.
ACCESSION   DATIML010001039 DATIML010000000
VERSION     DATIML010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4816
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4262587"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VLJ38_17960"
     CDS             complement(<1..226)
                     /locus_tag="VLJ38_17960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41471.1"
                     /translation="MREVIARQRDKWLGMAIVGATFLLGLAISLWAKHASRPETSAPP
                     GPPTTEGIVGWPAHVDVVATLAGARKVTRRN"
     gene            440..511
                     /locus_tag="VLJ38_17965"
     tRNA            440..511
                     /locus_tag="VLJ38_17965"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:472..474,aa:Val,seq:cac)
     gene            570..821
                     /locus_tag="VLJ38_17970"
     CDS             570..821
                     /locus_tag="VLJ38_17970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41472.1"
                     /translation="MAATACATPSSGARRILLPSYLFGTLEQRDFDTRDLCSGRVTEL
                     EFASTPSTVALSVVTLGVYTPRELWLRCEGGGAAAPSRR"
     gene            827..1165
                     /locus_tag="VLJ38_17975"
     CDS             827..1165
                     /locus_tag="VLJ38_17975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41473.1"
                     /translation="MRRFSPAFVLVTGLLGCAETRIYSGLPPGDPPTGYENRWHSSFF
                     FGTTPAGRAYDLGRLCPSGWSQIELSPDFFTSFAGVVTLFLYTPSRLTIVCARPLQLA
                     RPRASEGLAP"
     gene            1162..1659
                     /locus_tag="VLJ38_17980"
     CDS             1162..1659
                     /locus_tag="VLJ38_17980"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HSU41474.1"
                     /translation="MTRRRWFVSRDERTATVDVERVTPERFRVRLDGSEGELEVTLLG
                     RAGATAVTAEGRVFTFFPTQGGLVAHPSRERLEVTARPRRASAGASGHGAGESMVRAP
                     MPGRVLKLLVAEGDAVSAGAPLVVVEAMKMENELLAARAGVVKRIRIQVGDTVERDSA
                     LLELE"
     gene            1656..2642
                     /locus_tag="VLJ38_17985"
     CDS             1656..2642
                     /locus_tag="VLJ38_17985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSU41475.1"
                     /translation="MTKKLTLANVPTPLWRHDRLDALVGSEVWVKRDDLTASGAAGNK
                     IRKLDYLAAEALERGATTLVTCGGQQSNHARATAIVAAELGLRAVLLLRTVNPETPPP
                     VVGNLLLDYLVGAEVRFITPAQYRERDALMAGVARELAARDERPYVIPEGGSNGLGSL
                     GYVDAMAEVRVQLEAGLAGGIRSFDAVVHACGSGGTAAGATLGARKYGIAPVTHAMAV
                     CDDRAYFDAVVARIIAETVALDGSLDAHARPVVHDAWKGPAYGLPSAEQVAFIVEVAR
                     QTGLLLDPVYTGKALFGLSRLEDKPKRALFLHTGGIPGLLAQAEAFAAASQR"
     gene            complement(2669..>4816)
                     /locus_tag="VLJ38_17990"
     CDS             complement(2669..>4816)
                     /locus_tag="VLJ38_17990"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSU41476.1"
                     /translation="LLVTGIDAAYAAEGTPTLHLFFAELGLVAPLAVVLGLSGALVAE
                     LLLPPGFPRLGRVLARVREESAARRRELAGRLVAGAVFAILALIVTTRVGLRVLAGAD
                     SPLASGAAMALVAVGAWGFVIFGAVGAGVLVEERWPNLAPDPVRVGLTAFGFFAAACA
                     LLVFLGTTSGAGGVLAVFGVFRRQELDLRAPALVLVIFLAAVCAPPVGRRTWSLALAL
                     AAFVPCIALLPAAASSFERHTGLSVERHAPLGKLLLAAARHATDRDHDGASAWFGGGD
                     CAEGNPKISPSADDIPGNGIDEDCSGADATASVAPPPPAPLAQEDTAFVRDHLPKQPN
                     VVLITIDATRAELGFLGYHTHPVSPHLDELAKKSTVFENAYSLASYTSKSLAPMLIGR
                     YGSETHRGWLHFNRFTRDDIFVSERLKQAGIHTVSVQGHWYFFKNYGMERGYDRIDTQ
                     ATPADQPIEGDRTSNGDVLSDRLIAELSRPELDTRQFFLWSHYIDPHAEYVPHTEFDF
                     GHHGRELYDGELAFVDHHLGRVLEALAKRPFAERTVVIITSDHGEAFGEHGLYRHGFE
                     VWEELVRVPLLIYVPGVTPRRIAVRRSAIDIVPTILDIFGLPSPAPDQKGAFHGVSLL
                     PDVLAPPGYVPAPRIVYVDMPAGPYNDSREAYIENDLKLITSGNRALGLFDLKTDPGE
                     KRDLLDDTSKARPLLTKAKAFRKTLDEVIERPH"
BASE COUNT          743 a         1614 c         1709 g          750 t
ORIGIN      
        1 tgttgcggcg cgtcacctta cgggcacccg cgagcgttgc gaccacgtcg acgtgcgccg
       61 gccagccgac gatgccttcg gtcgtgggcg gaccgggcgg cgcgctcgtc tcgggtcgcg
      121 acgcatgctt cgcccagagc gagatcgcga gccccagcaa aaacgtcgca cccacgatgg
      181 ccatgccgag ccacttgtcg cgctggcgtg cgatcacctc ccgcatgacg ggatcggtcg
      241 gtgaaacgga gggcggttcg gagacaggcg tcggccccgg gcccggtgct ggtgcgccga
      301 aatccggggg gacctcggca tggggcgcta tcggggttgg ctggggcgga ggtacttccg
      361 gatcgctcat cggcaggggc gcttcgtcta ctactattgc gagaagaagc cgagcgcgct
      421 acacaggcgg cggtctttcg ggcgcataac tcagcggtag agtgcgtcct tcacacggac
      481 gaagccgtag gttcgatccc tactgcgccc acccggaggt cctcatccga aaccccctgt
      541 tccagcttgc tgcggctgcg gggttttgct tggcagcgac ggcatgcgcc acgccgtcca
      601 gcggcgcgcg gcgcattctt ttgccgagct atctgttcgg caccctcgag cagcgagact
      661 tcgacacgag ggatctgtgc agcggccgcg tgaccgaact ggagttcgcc tcgacgccgt
      721 cgacggtcgc gctcagcgtc gtgacgctcg gcgtgtacac cccgcgcgag ctctggctgc
      781 gctgcgaggg cggcggcgcc gctgcaccct cccgccggta gctgcgatgc gccggttctc
      841 gcctgcgttc gtgctcgtga cgggcctttt aggctgcgct gaaacccgca tctacagtgg
      901 cctgccgccc ggcgacccgc ccacgggtta cgagaatcgc tggcactcgt cgtttttctt
      961 cggcacgaca cccgccggca gggcttacga tctcgggcgc ctgtgcccga gcggctggtc
     1021 gcagatcgaa ctctcgccgg actttttcac gagcttcgcc ggagtggtca cgttgtttct
     1081 ctacacgccg agtcgtctca cgatcgtgtg cgcccgtccg ctgcagctcg cacgaccgcg
     1141 cgcgagcgag ggactcgcgc cgtgacgcgc cggcgctggt tcgtgagtcg cgacgagcgg
     1201 accgcgacgg tcgacgtcga gcgtgtcacg cccgagcgct tccgggtgcg tctcgacggg
     1261 agcgagggcg agctcgaagt gacgctgctc ggtcgtgccg gggcgacggc agtcacggcg
     1321 gagggtcgag tgttcacgtt ttttccgacc cagggcgggc tcgtcgcgca tccgagccgc
     1381 gagcgactcg aggtgacggc gcggccgcgc cgcgcgtcgg cgggagcgtc cggacacggc
     1441 gccggcgaaa gcatggtgcg agcacccatg ccggggcgcg tactcaagtt gctggtcgcc
     1501 gagggcgacg ccgtgagcgc cggcgcgccg ctcgtcgtgg tcgaagccat gaagatggaa
     1561 aatgagctct tggcggcgcg agctggcgtc gtcaaacgca tccgcatcca ggtaggcgac
     1621 accgtggagc gcgacagcgc gctcttggag ctcgaatgac caagaaactt acgctcgcga
     1681 acgtgccgac gccgctctgg cgtcacgatc gtctcgatgc gctcgtcggc tctgaagtct
     1741 gggtcaagcg cgacgatctg acggcgagcg gcgccgcggg caacaagatc cgaaagctcg
     1801 actacctcgc ggccgaagcg ctcgagcgcg gcgcgaccac gctcgtcacc tgcggcggtc
     1861 aacagtcgaa ccacgcgcgc gcgacggcga tcgtcgccgc cgagctcggc ctgcgcgccg
     1921 tgctcctcct ccgcaccgtc aaccccgaaa cgccgccgcc cgtcgtcggc aatctactcc
     1981 tcgactacct cgtgggcgcg gaggtccgct tcatcacgcc cgctcagtat cgcgaacgcg
     2041 acgcgctgat ggccggcgtg gcacgcgagc tcgccgcgcg cgacgagcgc ccgtacgtca
     2101 tccccgaagg cggctcgaac ggcttgggct cgctcgggta cgtcgacgcc atggccgaag
     2161 tgcgtgtcca gctcgaggcc ggactcgcgg gcgggattcg ctcgttcgac gcggtggtgc
     2221 acgcttgcgg ttcgggcggt acggccgccg gcgcgacgct cggcgcgcgc aagtacggca
     2281 tcgcgcccgt cacgcacgcc atggccgtct gcgatgaccg cgcctatttc gatgccgtcg
     2341 tcgcgcgcat catcgccgag accgtggcgc tcgacggctc gctcgacgct cacgcgcgtc
     2401 ccgtcgtcca cgacgcgtgg aaaggccctg cgtacggctt gccgagcgcg gaacaagtcg
     2461 cgttcatcgt cgaggtggcg cgccaaaccg ggctgttgct cgatcccgtg tacacgggta
     2521 aggcgctctt cggcttgagc cggctcgaag acaagccgaa gcgcgcgctc ttcttgcaca
     2581 cgggcggtat cccggggttg ctcgcgcagg cagaggcgtt cgcggccgcg agtcagcgct
     2641 gacgccgcgt cgagcgacgc cctgtcactc agtgcggtcg ctcgatgact tcgtcgagcg
     2701 tcttgcggaa ggctttggct ttggtgagga gcgggcgtgc cttgctcgtg tcatccaaga
     2761 ggtcgcgctt ctcgccggga tcggttttga gatcgaagag gccgagggcg cggttgccgc
     2821 tcgtgatgag cttcaggtcg ttctcgatgt aggcttcgcg tgaatcgttg taggggccgg
     2881 ccggcatgtc gacgtagacg atgcgcggcg cgggaacgta gccgggcggc gcgagcacgt
     2941 cgggcaacag ggaaacgccg tgaaaagcgc ctttttggtc tggagctggg ctcggcagac
     3001 cgaagatgtc gaggatggtc ggcacgatgt cgatggcgct ccgtcgaacg gcgatgcggc
     3061 gcggcgtgac gccgggcacg tagatcaaga gcggtacgcg cacgagctct tcccacacct
     3121 cgaaaccgtg gcggtaaagg ccgtgctcac cgaaggcctc gccgtggtcg ctcgtgatga
     3181 tgacgacggt gcgctcggcg aacgggcgct tggccagcgc ttcgagcacg cgccccaagt
     3241 ggtgatcgac gaacgcgagc tcaccgtcgt agagctcgcg cccgtggtgg ccgaagtcga
     3301 actcggtgtg cgggacgtat tcggcgtgcg gatcgatgta gtgcgaccac aggaaaaatt
     3361 ggcgcgtgtc gagctcgggc cgtgaaagct cggcgatcaa gcgatcgctc aggacgtcgc
     3421 cgttcgaggt acgatcgcct tcgatcggtt ggtcggcggg tgtcgcttgc gtgtcgattc
     3481 tgtcgtagcc gcgctccatc ccgtagtttt tgaagaagta ccagtggccc tggacgctca
     3541 cggtgtggat gcccgcctgc ttgaggcgtt cggagacgaa gatgtcgtcg cgcgtgaagc
     3601 ggttgaagtg gagccagccg cggtgcgtct ccgagccgta gcggccgatc agcatgggcg
     3661 cgaggctctt gctcgtgtac gacgcgagcg aatacgcgtt ctcgaacacg gtgctctttt
     3721 tcgcgagctc gtccaagtgc ggcgaaactg gatgcgtgtg gtagcccaga aagccgagct
     3781 cggcgcgcgt cgcgtcgatc gtgatgagca cgacgttcgg ctgcttcggc aggtgatcgc
     3841 gcacgaacgc cgtgtcctcc tgcgcgagcg gcgcgggcgg tggcggcgcg acgctagcgg
     3901 tcgcatccgc gccggagcag tcttcgtcga tgccgttgcc ggggatgtcg tcggcgctcg
     3961 ggctgatttt ggggttgccc tcggcgcagt cgccgccgcc gaaccacgcc gaagcgccgt
     4021 cgtgatcgcg atcggtcgcg tgacgcgcgg cggcgagcag gagcttgccg agcggcgcgt
     4081 gccgttcgac cgacagcccg gtgtgccgct cgaacgacga ggccgcggcc gggagcagcg
     4141 cgatgcacgg cacgaacgcg gcaagcgcga gcgcgagcga ccacgtccgg cgcccgacgg
     4201 gcggcgcgca caccgccgcc aagaagataa cgagcacgag cgccggcgcg cgcaaatcga
     4261 gctcctgccg gcgaaacacg ccgaacacgg cgagcacgcc gcccgcgccg ctcgtcgtgc
     4321 ccaggaacac gaggagggcg cacgccgccg cgaaaaatcc gaacgccgtg agcccgacgc
     4381 gcaccggatc gggcgccagg ttcggccagc gctcctcgac gagcacccct gccccgaccg
     4441 caccgaagat cacgaacccc cacgcgccga ccgcgaccag cgccatggcc gcgccggacg
     4501 cgagcggcga atccgcgccc gcgagcacgc gcaagccgac gcgcgtcgtc acgatcagcg
     4561 ccaagatcgc gaatacggcg cccgcgacga gacgccccgc gagctcacgc cggcgcgccg
     4621 cgctctcctc gcggacgcgc gcgagcacgc gtccaagccg tggaaacccg ggcggcaaca
     4681 agagctcggc cacgagtgcg cccgaaagcc cgagcacgac ggcgagcggc gccacgagcc
     4741 cgagctcggc gaagaacaaa tgcagcgtgg gggttccctc cgcggcgtac gccgcgtcga
     4801 ttcccgtcac gaggag
//
LOCUS       DATIML010001040         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_218993, whole genome shotgun sequence.
ACCESSION   DATIML010001040 DATIML010000000
VERSION     DATIML010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218993"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VLJ38_17995"
     CDS             complement(<1..874)
                     /locus_tag="VLJ38_17995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41477.1"
                     /translation="MAIKKLTQRCVLAFAALDVLFNPLVMIAFLGLFHVEEPHGAAFV
                     LPLLVLGKLAANSMFLSLELAPYERAMSRNGKSSEELLLAADRALQALPRRFGIFYAC
                     TWSLTYALAFVTVYLLVPGAIGPRAMDAGGMLVAAVWFGGFAFGFPLAAMLTTDGASA
                     CSLEARERGVALDRDPVALQWRIGVVALALGLGPTLWMMALGYMKEVQAACEERGTLS
                     ALAVSELARSPLDGADAVARFAQDFQRAHAAVGVREASAVVTDAALRPLTLVPAPDPL
                     AVAREWLKAELERAP"
     gene            complement(878..1330)
                     /locus_tag="VLJ38_18000"
     CDS             complement(878..1330)
                     /locus_tag="VLJ38_18000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41478.1"
                     /translation="MATTNPTLELLDGQIRMGELTFLVAGKPPAALAIAAARVRSILP
                     AASFSGNALDLRPFLSIDASDDAAHVLLLAQGADELALGVGGHLTLLTLEASAVLPLP
                     RVLRESSGMSHLLAPRGVPLMFVLDLARLDGAQTSRGSSELCAAVTET"
     gene            complement(1317..>1575)
                     /locus_tag="VLJ38_18005"
     CDS             complement(1317..>1575)
                     /locus_tag="VLJ38_18005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41479.1"
                     /translation="AGASAPQRARTLIVSHEQGIAALPIDAAREVKSVPEARLVATPG
                     ELVPYATRELDEEGAVTPVIDLARLLNDLHRVAGADADGDN"
BASE COUNT          272 a          542 c          559 g          202 t
ORIGIN      
        1 cgggcgcgcg ctcgagctcg gctttgagcc actcccgcgc gacggcgagc gggtcgggcg
       61 ccggcacgag cgtgagcggc ctgagcgccg cgtcggtcac gaccgcgctc gcctcacgca
      121 caccgaccgc ggcgtgagcg cgctggaagt cttgcgcgaa gcgcgcgacg gcgtcggcgc
      181 cgtcgagcgg tgaacgagcg agctcggaca cggcgagcgc gctcagcgtg ccgcgctctt
      241 cgcacgccgc ctgcacctcc ttcatgtagc cgagcgccat catccagagc gttgggccca
      301 ggccgagcgc cagcgccacc acgccgatgc gccactgcag tgccaccgga tcgcgatcga
      361 gcgctactcc gcgttcacgc gcctcgagcg agcaagcgct cgcgccatcc gtcgtgagca
      421 tggcggccag cgggaagccg aaggcgaagc cgccgaacca caccgccgcg accagcatgc
      481 cgcccgcgtc catcgcacgg ggtccgatcg cacccgggac gagcaggtac accgtcacga
      541 acgcgagcgc gtacgtcagg ctccaggtac aggcatagaa aatgccgaaa cgccgcggca
      601 gggcctggag cgcccggtcc gccgcgagca agagctcttc gctgctcttg ccgttgcgac
      661 tcatcgcgcg ctcgtacggc gcgagctcca gcgacaaaaa catcgagttg gcggcgagct
      721 tgccgagcac gagcagcggc aagacgaagg cggcgccgtg cggctcttcg acgtggaaca
      781 agccgaggaa cgcgatcatg acgagcgggt tgaacagcac gtcgagcgcg gcgaaggcga
      841 gcacacaacg ctgggtcagt ttcttgatgg ccatcggtca agtctccgtt acggcggcgc
      901 aaagctccga cgagccgcgc gaggtctggg ctccgtcgag ccgagcgaga tcgagtacga
      961 acatgagcgg cacaccgcgc ggggcgagca ggtgtgacat tccggagctt tcccggagaa
     1021 cgcgaggaag cggcaagacg gcgctcgcct cgagcgtgag cagtgtgagg tggccgccca
     1081 cgccgagcgc gagctcgtca gcgccctgtg cgagcaggag cacgtgcgca gcgtcgtcgc
     1141 tcgcgtcaat cgacagaaac ggccgcagat cgagcgcatt gccgctgaac gacgccgcgg
     1201 gcaggatcga acgcacgcga gcggccgcga tcgcgagcgc tgcgggaggc ttgcctgcca
     1261 cgaggaaagt gagctcgccc atcctgatct ggccgtccaa gagctcgagc gtagggttag
     1321 ttgtcgccat cggcgtcggc gcccgcgacg cggtggagat cgttcaggag ccgtgcgaga
     1381 tcgatgacgg gcgtgaccgc gccttcctcg tcgagctcac gcgtcgcgta cggcacgagc
     1441 tcgccgggcg tcgcgaccag ccgcgcctcc ggcaccgatt tgacttcgcg cgcggcgtcg
     1501 atgggcagcg ccgcgatgcc ttgttcgtga ctcacgatca gcgtgcgggc gcgctgcggc
     1561 gccgaagcgc ccgcc
//
LOCUS       DATIML010001041         2383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_510292, whole genome shotgun sequence.
ACCESSION   DATIML010001041 DATIML010000000
VERSION     DATIML010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510292"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1422)
                     /locus_tag="VLJ38_18010"
     CDS             complement(<1..1422)
                     /locus_tag="VLJ38_18010"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU41480.1"
                     /translation="MPHPTRRSLLLFAGASALGACHSREESTSAAATGSGEASNARSE
                     TIRIAIGTQDTTINCATGGPLVRELKLLEQFLPKTGRYARVKYDIRWENQPTGAQLNS
                     KYLANQLDIVQMADFPSVIGATALHAAPGGVESLYVATLAGGIHGAGNAILVPADSKV
                     QSLSELKGKKISVPFGSTAHAMLIRAVQDLGWDPQHDVEIVTQTPEVAGSALKAHQID
                     AHANFVPFGELFPFRGFARKIYDGSSTGVTTTHGVQVRSDYAAQYPEIVVAFLKATLE
                     ADRLYRERPEALSEQLAAWTGVDAEVYYAFHGPHGIQTRDYSLKPEYVAAIRKAQAAL
                     KVLKKVEHEIDVERYVTDRFIRQAAREFGGDYDARLASYDPLPFAGDAFDTHAPIVDA
                     SLAGQLWAKGEPKVRLYSSVEATFAAHKALVASGHAPRVTFVHDRSSGNKLFADKVWY
                     VEKGGQLSAFLLKPAALIWASEHG"
     gene            complement(1422..>2383)
                     /locus_tag="VLJ38_18015"
     CDS             complement(1422..>2383)
                     /locus_tag="VLJ38_18015"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU41481.1"
                     /translation="AEPNDVLARLNDPDPALRQLALVEFGELADETSVEPLLVALRDP
                     DAVVRRLAVTLLEDIGDARAVHGIVALLSDDEREVREAAEAALREFRGPEAAGALLAA
                     IVNPEAEVRRAVIVALRELRDARAVEPLVAALDDPVSSVRREAVVTLAYLRLPTAVEP
                     LRAKLGDVDPAVRRVAVGALAYFNGPALLADFTRALADSDWRVRVEAAIVLGRSGLSS
                     AVPALRRVLSDDAYWQVKKEAIAALGRLAAVSAVAELMRELGSPTPDLRRAAAYALGE
                     IKAPEAAAALVELDADPDIEVRKAAARARAAIESACVARNRDN"
BASE COUNT          360 a          793 c          836 g          394 t
ORIGIN      
        1 gccgtgctcg ctcgcccaaa tcagggccgc gggtttgagc aagaacgcgc tcaattgtcc
       61 gcccttttcg acgtaccaga ccttgtcggc gaagagcttg ttaccgctcg agcggtcgtg
      121 gacgaacgtg acgcgcggcg catgtccact cgccaccagg gccttgtgcg ccgcgaaggt
      181 cgcttccacg ctcgagtaga gccgcacctt gggctctccc ttggcccaga gttgcccggc
      241 gaggctcgcg tccacgatcg gtgcgtgcgt gtcgaacgcg tcgccagcga acggcagcgg
      301 gtcataactc gcgagccgcg cgtcgtaatc gccgccgaac tcgcgcgccg cttggcgaat
      361 gaagcgatcg gtcacgtagc gctcgacgtc gatctcgtgc tcgaccttct tcagcacctt
      421 cagcgctgct tgtgctttgc ggatcgcggc gacgtactcg ggcttgagcg aatagtcgcg
      481 cgtctggatc ccgtgcggcc cgtgaaacgc gtagtagacc tccgcgtcga cgccggtcca
      541 ggccgcgagc tgctccgaga gcgcttccgg tcgttcgcgg tacaggcgat cggcctcgag
      601 cgtcgctttc aaaaaggcca cgactatctc ggggtattgg gcggcgtagt cggagcgcac
      661 ctgcacgccg tgcgtcgtcg tcacgcccgt cgagctgccg tcgtaaatct tgcgcgcgaa
      721 gccgcgaaac gggaacagct cgccgaaggg gacgaaattg gcgtgagcgt cgatttggtg
      781 cgctttgagc gcgctgccgg ccacttcggg cgtctgcgtc acgatctcga cgtcgtgttg
      841 cggatcccag ccgaggtcct gcacggcgcg gatcagcatc gcgtgcgcgg tcgagccgaa
      901 cggcaccgag atctttttgc ccttgagctc cgagagtgac tgcaccttcg aatcggcggg
      961 gacgaggatc gcgttacccg cgccgtgaat cccgccggcg agcgtggcga cgtagagtga
     1021 ctccacccca ccgggcgcgg cgtgcagggc cgtcgcgccg atgacggagg gaaaatccgc
     1081 catttgcacg atgtcgagct gattggcgag gtatttgctg ttgagctgcg cgcccgtggg
     1141 ctggttttcc cagcgaatgt cgtacttcac gcgcgcgtag cggcccgtct tgggcaagaa
     1201 ttgctcgagc agcttgagct cgcgcacgag cgggccgccc gtcgcgcaat tgatggtggt
     1261 gtcttgcgtg cctatggcga tgcggatcgt ctcgctgcga gcgttgctgg cttcgccgga
     1321 gccagtggcg gcagcggacg tgctctcttc gcgggagtgg cacgcaccga gcgctgaggc
     1381 accggcgaag agcaagagcg aacggcgtgt cggatgtggc atcagttgtc tcggttgcgg
     1441 gcgacgcatg cgctttcgat cgcggcgcgc gcccgcgcgg ccgccttacg cacttcgatg
     1501 tccgggtcgg catcgagctc gacgagcgca gcggcggcct cgggcgcctt gatttcgccc
     1561 agggcatagg ccgcggcgcg cctgagatcg ggtgtcgggc tgccaagctc gcgcatgagc
     1621 tccgccacgg cggacacggc cgcgagccga ccgagcgcgg cgatggcttc cttcttgacc
     1681 tgccagtagg cgtcgtccga caagacgcgc cgcaacgcgg gcacggcgct cgacaggccc
     1741 gagcgaccga gcacgatcgc cgcttcgacg cggacgcgcc agtcgctgtc ggcgagggca
     1801 cgggtgaaat cggcgagcag cgccggcccg ttgaagtagg caagcgctcc gacggcaacg
     1861 cgccgcacgg cgggatctac gtcgccgagc ttcgcgcgca gcggctcgac tgccgtcggc
     1921 aagcgcaagt acgcgagcgt cacgacggct tcgcgccgca cgctgctcac cggatcgtcg
     1981 agcgccgcga cgagcggttc gacggcgcgc gcgtcgcgga gctcacgcag cgcgacgatg
     2041 acggcgcggc gcacttccgc ctccgggttc acgatagcgg cgagtaaggc gcccgccgct
     2101 tccggaccgc gaaattcacg tagagccgct tccgccgcct cccgcacttc gcgctcgtcg
     2161 tcggagagca gcgccacgat gccgtggacc gcgcgcgcgt cgccgatgtc ctcgagcaac
     2221 gtcacggcga gtcgccgcac gacggcgtcc gggtcccgga gcgcaacgag caagggttcg
     2281 accgaggttt cgtccgcgag ctcgccgaac tcgacgagcg cgagctggcg gagcgccgga
     2341 tcgggatcgt tgagccgcgc gagcacgtcg ttcggctcgg cgc
//
LOCUS       DATIML010001042         3247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2818985, whole genome shotgun sequence.
ACCESSION   DATIML010001042 DATIML010000000
VERSION     DATIML010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2818985"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1074)
                     /locus_tag="VLJ38_18020"
     CDS             complement(<1..1074)
                     /locus_tag="VLJ38_18020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41482.1"
                     /translation="MSPLVVSLEAIRTDGWFERVGEGIGSFQALCEIVGSRFFAFAMI
                     TGARITSLTVDRRVPENTLVEFAVGADEEAGVAGEPQRLTLGEFRHRLVNALVIDEPH
                     GPAPKRPTDLEAVQLHIGVRYLLLAPLYGYALRELQVGADGTNIVLAHDGLEESYPLP
                     AFRARIRTHVREELERVRRPAARSAIDLSRVNEAQTAMARGDHVRVLELLGAWPAPLA
                     IFLRTPEGQLLNQEARATIARGLGLLGSACIALGEGIKGEEILRLGIQYAGEGEAAPD
                     LFLRLGEAMLGDGRAGEAIGPLRRGANLGASPARVWTLLAQAFATRGRSLAALGAVLE
                     ARAAGAPEVDLEGVVDRIKGALGP"
     gene            1215..2294
                     /gene="mutY"
                     /locus_tag="VLJ38_18025"
     CDS             1215..2294
                     /gene="mutY"
                     /locus_tag="VLJ38_18025"
                     /inference="COORDINATES: protein motif:HMM:TIGR01084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HSU41483.1"
                     /translation="MARDLGSRLLAWYDRNRRALPWRSTRDPYAIWVSEVMLQQTQVA
                     TVLRYFPNWMRRFPSVHALAGAPEADVLHAWQGLGYYSRARRLHAGARFLLERHGGQL
                     PRTHTALLDLPGIGAYSAGAIASIAFGEQRPLVDGNVVRVLSRHFGLRGDPGKGPLRR
                     ALWQLAGELVPEDRPGDFNQALMELGATVCTPRAASCETCPLGATCVARSEGLVEKLP
                     ELPARPKPSRVRAVAVAVRDGERIVLVRLPAAAPRWAGLWTFPHVELGTGETLATGAG
                     RAVHEALGVKAHIGRELTRIEHTITRFRIALELVEATLPASARRAALHGEHVVRALPR
                     ELAGLAMPTPHRKLAAWLVANGGGS"
     gene            2291..2698
                     /locus_tag="VLJ38_18030"
     CDS             2291..2698
                     /locus_tag="VLJ38_18030"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSU41484.1"
                     /translation="MNERARVEVAIALVIREGRLLVTRRQAEAHLGGFWELPGGKLRP
                     GEGAEACAVREVREETRVVVVARARRPTIEWEYPERRVALHPVECDWIQGNGELVEVS
                     DLAWVTRAELLARTFPPANAELIAELSASGRLL"
     gene            2912..>3247
                     /locus_tag="VLJ38_18035"
     CDS             2912..>3247
                     /locus_tag="VLJ38_18035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41485.1"
                     /translation="MLTLPYMPGFARIRYLGIALLVGCGGIDVSSDGASTARVRGERA
                     TNDCSAIVESSANDPAAAGSGCSTPPAEDHCWLAVPDGGFGERALTVQATSFTVSVSI
                     VPSANGVDGI"
BASE COUNT          464 a         1092 c         1192 g          499 t
ORIGIN      
        1 tggtccgaga gcccccttaa tccggtcgac gactccctcg aggtcgacct cgggggcgcc
       61 ggcggcgcgc gcttcgagga cggcgcccag agcggcgagc gagcggccgc gggtggcaaa
      121 cgcctgcgcg aggagcgtcc acacccgagc cgggctcgcg ccgaggttcg cgccccgccg
      181 caagggcccg atggcctcgc ccgctcgacc gtcgccgagc atcgcctcgc cgaggcgcag
      241 gaagaggtcc ggcgcggcct ccccctcccc ggcgtactgg atgccgagcc gcaggatttc
      301 ctcgcccttg atgccttcgc cgagcgcgat gcaggcgctg ccgagcaggc cgagcccgcg
      361 ggcaatggtg gcgcgggcct cctggttcag gagctggccc tccggcgtgc ggaggaagat
      421 ggcgagcggg gccggccacg caccgagcag ctcgagcacc cggacgtggt cgccgcgcgc
      481 catcgccgtc tgcgcctcgt tcacgcggct cagatcgatg gcgctgcgtg cggcgggccg
      541 gcggacgcgc tcgagctctt cccgtacgtg ggtgcggatc cgggccctaa aggccgggag
      601 tggatagctt tcttcgagac cgtcgtgggc gagcacgatg ttcgtgccgt cggcgcctac
      661 ctgcagctcg cgcagcgcgt aaccgtagag cggcgcgagc aagaggtagc gcaccccgat
      721 gtgcagctga acggcttcga gatccgtcgg gcgcttgggg gccgggccgt gcggctcgtc
      781 gatcacgagg gcgttgacca aacgatgccg gaactccccg agcgtgagcc gttggggctc
      841 gccggcgacc ccggcctctt cgtcggcgcc gacggcgaac tcgacgagcg tgttttccgg
      901 cacgcggcgg tcgaccgtga gcgacgtgat gcgcgcaccc gtgatcatcg cgaacgcgaa
      961 gaaacgggag ccgacgattt cacacagcgc ctggaagctg ccgatgccct cgcccacacg
     1021 ctcgaaccaa ccgtcggtgc gaatggcctc cagggacacg acgagggggc tcatcggacg
     1081 gaagatgctc tcatgcggga tggcttttcg ccaggggtta agttctaaag acggcggagt
     1141 atttctgctt ggcggaaaag ccgaggccag gcgcggcacg gtccgcgacg acaccggagc
     1201 cggttctgcg tggcgtggct cgcgatctcg gttcacggct cctcgcttgg tacgatcgta
     1261 accggcgggc ccttccttgg cgcagcacgc gcgatcccta cgcaatttgg gtgagcgagg
     1321 tcatgctgca gcagacgcag gtcgcgacgg tgcttcggta ttttccgaat tggatgcgcc
     1381 ggtttccgag cgtgcacgcg ctcgcgggcg cgcccgaggc tgacgtgctc cacgcctggc
     1441 aagggctcgg ctactattca cgggcgcgcc ggctccacgc gggagcccgc tttctgctcg
     1501 aacgacacgg cgggcagctg ccgcgcaccc acacggcgct gctcgacctg ccggggatcg
     1561 gcgcttattc ggctggcgcc atcgcgagca tcgcgttcgg cgagcaacgg ccgctcgtgg
     1621 acggcaacgt cgtgcgcgtc ctttcgcgtc acttcggatt gcgcggcgat ccgggcaagg
     1681 ggccgctgcg ccgggcgctc tggcagcttg ccggcgagct cgtcccggag gatcggcccg
     1741 gagacttcaa tcaggcgctg atggagctcg gcgcgacggt ttgcaccccg cgcgcggcga
     1801 gctgcgaaac atgtccactg ggagcgacgt gtgtggcccg gagcgagggc ctggtcgaaa
     1861 agctgccgga gcttcccgcg cgaccgaagc cgagccgtgt tcgcgccgtg gcagtggcgg
     1921 tgcgcgacgg cgagcgaatc gtcttggtac gcctgcctgc agcggcgccg cgttgggccg
     1981 ggctctggac ctttccgcac gtcgagctcg gcaccggcga aacgctggca accggggccg
     2041 gacgtgccgt ccacgaagcg ctgggcgtca aggcgcacat cggccgcgag ctcacgcgca
     2101 tcgagcacac catcactcgc tttcgcatcg cgctcgagct cgtcgaggcg acgctgcccg
     2161 cgagcgcgcg ccgtgccgcc ctgcatggcg aacacgtcgt gagggcgctc ccgcgcgagc
     2221 ttgcaggcct cgcgatgccg acaccccatc gcaaactcgc ggcgtggttg gtcgcgaacg
     2281 gcggcgggtc gtgaacgagc gagcgcgcgt cgaggtcgcg atcgcgctcg tgattcgcga
     2341 gggccgcttg ctcgtgacgc gacggcaggc cgaggcgcac ctcggcggct tttgggagct
     2401 gcccggcggc aagctgcggc ccggagaggg cgcggaagcg tgcgccgtgc gcgaggtgcg
     2461 cgaggagacg cgcgtcgtgg tcgtcgcgcg tgcgcggcgc ccgacgattg agtgggagta
     2521 tccggagcgg cgagttgcgc tgcatccggt cgagtgcgat tggatccagg gcaacggcga
     2581 gctcgtcgag gtgagcgacc tcgcttgggt aacgcgcgcc gagctgctgg cccgcacgtt
     2641 tccgccggcg aacgccgagc tcatcgccga gctgtctgcg agcgggcgcc tgctctgagg
     2701 cggccccgac gcggtgtgcg gccgcagtgc gttcgccgtg ctgggccgtg aagctgaatt
     2761 gccgcaggag ggtgcgcggg cggcgcagat tgacgcattc ggcgagacga gacgacacgc
     2821 accttcgcca cttcgaggcg gaaacgagcg gttcgagcca cgcacgggcg tctacgcgcg
     2881 gcgaccgctg cgatttggcc tggcgcgcct cttgctcacc ttgccctaca tgccgggttt
     2941 cgctcggatt cgctacctcg gaatcgcgct cctcgtcggg tgcggcggta tcgacgtgag
     3001 cagcgatggt gcttcgacag cgcgcgttcg gggtgaacga gcgaccaacg actgctcggc
     3061 gattgtcgag agcagcgcaa acgacccagc cgcggctggc agcggctgca gcacaccgcc
     3121 cgctgaggat cactgctggc tcgccgtgcc ggacggcggc ttcggcgagc gggcgcttac
     3181 cgtacaggca acctcgttca cggtttctgt gtccatcgta ccgtctgcca acggcgtcga
     3241 cggtatc
//
LOCUS       DATIML010001043         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_800267, whole genome shotgun sequence.
ACCESSION   DATIML010001043 DATIML010000000
VERSION     DATIML010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_800267"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..737
                     /locus_tag="VLJ38_18040"
     CDS             <1..737
                     /locus_tag="VLJ38_18040"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU41486.1"
                     /translation="RLLETERVYSLGVITAGLARELDGPVSAVRGHVNRARQLLRETL
                     AALPPDSSRASARGQLLDMDEELGESLVAAERALDVVRGVAIPTGPAKRQDVDVCEVL
                     RLTLRLLQSELRTAGSVEIDVHPVPTVSGSTAQVGQVMLNLLVSALDMMVNSPRHQRA
                     VSIRLRYDEPWVVFEVKSSGPPCGGEVEADFRLGQRADPQRGLGLAISRSIVQDLGGE
                     LDTDMRAAGFAVRRVRFPHVNPKSPS"
     gene            804..>2059
                     /locus_tag="VLJ38_18045"
     CDS             804..>2059
                     /locus_tag="VLJ38_18045"
                     /inference="COORDINATES: protein motif:HMM:NF016202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanW family protein"
                     /protein_id="HSU41487.1"
                     /translation="MRLGLLTAAFALGGAAAAGVLCSAPRLGRALATRPVLSVEERRL
                     ASDADPRPFVEALARGVAKREAYFETPEGVEPARFEELGLGVDVDATLLALQRARRVR
                     STSERLASVLEPEPEPAVVPLAYELDRGRAHEFLEGLARRLDRAPVNARLDLQGHRRV
                     HEAAGRALDVSESLRAVERGERRDLARFTLTFLPLEPGVTGRELATVDVTRVLSSFET
                     DFSKKPRSRIPNITTAARYLNGVIIGPGQIFSFNHVVGPRTEERGFRNAPVIVADELE
                     PGLGGGVCQVASTLFAAAMLGGLDIVERRSHSRPSGYAPLGLDATVIYPEVDLRLRNS
                     YDTPLMLHAFLPNGRVLRVELLGRDPPGKVEHFFAAEAPEPFTRRVVVKPDLLPGTVD
                     RRQKGNAGYDGTSTLLTTLADGTRRAR"
BASE COUNT          292 a          732 c          722 g          313 t
ORIGIN      
        1 ggcgcctgct cgagaccgaa cgcgtgtatt cgctcggtgt catcacggcc gggctcgccc
       61 gcgagctcga cggtccggta tcggccgtgc gcggccacgt caaccgagcg cgccaactct
      121 tgcgcgagac gctcgccgcg ctgccgccgg actcgagtcg ggcctccgca cgcgggcagt
      181 tgctcgacat ggatgaagag ctcggcgaat cgctggtcgc cgcggagcgc gcgctcgacg
      241 tcgtgcgcgg cgtcgcgatc ccgaccggtc ccgccaagcg ccaggacgtc gacgtgtgcg
      301 aggtgctgcg cctcaccctt aggctcttgc aaagcgagct gcgcacggcg ggcagcgtcg
      361 aaatcgacgt gcatccggtg ccgaccgtct cgggctcgac cgcgcaggtc ggccaagtca
      421 tgctgaacct actcgtcagc gcgctcgaca tgatggtcaa cagcccacgg caccagcgcg
      481 cggtctcgat ccgcctccgc tatgacgagc cgtgggtcgt gttcgaggtg aagagctccg
      541 gaccgccctg cggcggcgaa gtggaggccg actttcgctt ggggcagcgc gctgatccgc
      601 agcgtggcct cggccttgcg atctcgcgct cgattgtgca ggacctcggc ggtgagctcg
      661 atacggacat gagagcggcg gggttcgccg tgcggcgagt ccggtttccc cacgtgaacc
      721 cgaagagccc gagctaaggt cgcgctgggg ctgtgcccga gctggatctc gcgcgttcga
      781 gggaggcttg ctaagctcca ggggtgcgcc tggggctact tacagccgcc tttgcgctcg
      841 gtggcgcggc tgccgccggc gtcctctgtt ccgccccgcg gctcggacgg gcgctcgcca
      901 cgcgaccggt gttgagcgtc gaggagcggc gcctcgcgag cgacgccgat ccacggccgt
      961 tcgtcgaagc gctcgcccgg ggcgtcgcga agcgcgaggc gtacttcgag acgcccgagg
     1021 gtgtcgaacc cgctcgcttc gaggagctcg ggctcggcgt cgacgtggac gcgacgctcc
     1081 ttgcgctgca gcgcgcgcgt cgcgtgcgaa gcacgagcga acggctcgcg agcgtgctcg
     1141 agccggagcc cgagccggcc gtggtgccgc tcgcgtacga gctcgaccgt gggcgcgcgc
     1201 atgagtttct cgaggggctc gcgcgccgcc tcgaccgagc gcccgtgaac gcgcggctcg
     1261 atttgcaggg gcaccgccgc gtccacgaag cggcagggcg cgcgctcgac gtgagcgaga
     1321 gcctgcgcgc ggtcgaacgc ggcgaacgcc gtgatctcgc gcgtttcacg ctgacgttcc
     1381 tcccgctcga accgggcgtg accggccgcg agctcgcgac cgtcgacgtg acgcgcgtgc
     1441 tgtcgagctt cgagacggat ttctcgaaaa aaccccgctc gcgcatcccc aacatcacca
     1501 cggcggcccg ctacttgaac ggggtcatca tcggccccgg ccaaatcttc agcttcaatc
     1561 acgtcgtggg cccgcgcacc gaggagcgcg gcttccgcaa cgcgcccgtg atcgtcgccg
     1621 acgagctcga gcccggcctc ggtggcggcg tctgccaggt cgcgagcacg ttattcgcgg
     1681 cggcaatgct cggcgggctc gacatcgtcg agcgccgtag ccacagccgc ccgagcgggt
     1741 acgcgccgct cggcctggat gcgaccgtga tttatcccga ggtcgatctg cgcctgcgaa
     1801 attcctacga cacgccgctc atgctgcacg cattcttgcc gaacggccgt gtgctacgcg
     1861 tcgagctgct cggccgcgac ccgcccggca aagtcgaaca tttctttgcc gcggaggccc
     1921 cggagccctt cacgcgccgc gtcgtcgtca agccggacct gctaccgggc acggtcgacc
     1981 ggcgccagaa gggcaacgcg ggctacgacg gcacgagcac cctgctcacg acgctcgcgg
     2041 acggaacgcg ccgggcccg
//
LOCUS       DATIML010001044         2624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5134464, whole genome shotgun sequence.
ACCESSION   DATIML010001044 DATIML010000000
VERSION     DATIML010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5134464"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="VLJ38_18050"
     CDS             <1..424
                     /locus_tag="VLJ38_18050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41488.1"
                     /translation="LAGTSLGGCRIETYRDGSLSPNTLSLDALIADTGTYVLCSSSLA
                     DVESVRCDRSTNLLFNGNDAVALVCNGATLDVIGQIGVDPGDAWTDGDASTANQTLRR
                     RCSVTSGDSEGSDAFDPVNQWVALPVDTVDGLGDGTCG"
     gene            complement(486..2228)
                     /locus_tag="VLJ38_18055"
     CDS             complement(486..2228)
                     /locus_tag="VLJ38_18055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41489.1"
                     /translation="MKPLSARIPALKSLSARLGELVARRRALVALGAYALVVVWFTWP
                     VLPNVGASPVGRVGDQSIALWDNWWLAKAFSTHASPFYTRHLFYPTGVSLVYHSISWL
                     TALVALPLRALFGAVASYNLTFLLETLLCAGSMFALALYLTKDALAAWISGFVFAFDP
                     YRITRAMQHPNLANTGFIPLVFLGLFRAWRDKPRAVWLAAAALACVLLTGVHLFLMTS
                     VALLVLVPFEAWQTRRFRDVRFWKTTLYFGLACLVLVGPLVVPYVQSRSALGEAMATV
                     TEDWSTDLLALIVPAPHHAFGAHHGYRLYGEAGSVAYLGVVALLLAAAVWLMPETRRA
                     GLVWWTGFALLVVLSLGPRLTFDARDHDVWMPYRLVERIPIFRAVRAPERLNLLARVF
                     FAVAVAWGVVALARLLPKRSLAGLVALPLVLFDYYDGPYPMRPIDQSQFYNDLAQRGG
                     TGAILPLPLDRQSSKRAMLAQTIHGRPILGGMVARTPNTAHRYIHGSSLLRALAANRP
                     LDCRKVTLRDDLARLKHDNVEFIVVRYPHVNGGLTSAYRSYLVDQPYFADRHLEAHRI
                     DDLLAARLPCDAPE"
     gene            complement(2185..>2624)
                     /locus_tag="VLJ38_18060"
     CDS             complement(2185..>2624)
                     /locus_tag="VLJ38_18060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HSU41490.1"
                     /translation="NPEDMLETGIEILAQPPGKKLGNIELMSGGEKALTAVSLIFAIF
                     QHRPSPFCILDEVDAPLDEANVTRYNEMIRALTSQSQFVLITHIKKTMQSTDVLYGVT
                     MGEPGVSRIVSVKVNENAAARSDNLAQATREAAVSADSGAQVA"
BASE COUNT          490 a          819 c          931 g          384 t
ORIGIN      
        1 actcgccgga acgtccttgg gcgggtgtcg gatcgaaacc tatcgtgacg gttcgctgtc
       61 accgaatacg ctctcgctgg atgcactgat cgccgatacg gggacgtacg tgctctgctc
      121 gtcgtcactc gcggacgtcg agagcgtgcg ctgcgaccgt tccacgaacc tgctcttcaa
      181 cggcaacgac gcggtcgcgc tcgtgtgcaa cggcgcgacg ctcgatgtga tcgggcaaat
      241 cggcgtggac ccgggtgacg cgtggacgga cggcgacgcg agcaccgcga accagacctt
      301 gcggcgccgc tgcagtgtga cgagcggcga ctccgagggc agcgatgcgt tcgacccggt
      361 gaatcaatgg gtcgctttgc cggtggacac ggtggacggc ctgggcgacg gcacgtgcgg
      421 ctgactcgag tggaacggag cgcgcccgcg ccgaaactcc tcgctccagc ggtcgccaac
      481 caatcctact cgggtgcgtc gcacggcaag cgcgctgcca gaagatcgtc gatgcgatgc
      541 gcctcgaggt gccgatcagc gaagtacggc tggtccacga ggtacgaacg gtaggcggac
      601 gtgaggccgc cgttcacgtg agggtagcgc accacgatga actcgacgtt gtcgtgcttg
      661 agccgcgcga ggtcgtcgcg cagcgtgacc ttgcgacagt cgagcgggcg attggccgcg
      721 agcgcccgca acagtgagga gccgtgaatg tagcggtgcg ccgtgttcgg tgtgcgtgcg
      781 accatgccgc cgaggatggg ccggccgtgg atggtttggg ccagcatggc gcgcttgctc
      841 gactgacgat cgaggggcaa aggcaggatc gcgcccgtcc cgccgcgctg cgcgaggtca
      901 ttataaaatt ggctttgatc gatgggacgc atcgggtagg ggccgtcgta gtagtcgaag
      961 agcacgagcg ggagcgcgac gagcccggcg agcgaccgct tcggcaggag gcgcgcgagc
     1021 gcgacgacgc cccaagcgac cgcgacggcg aagaagacac gcgcgagcaa attcaaccgc
     1081 tccggtgcgc gtacggcccg gaagatcgga atgcgttcga ccagccgata cggcatccag
     1141 acgtcgtggt cgcgcgcgtc gaacgtgagg cgtggcccga gactcaggac gacgagcagc
     1201 gcgaacccgg tccaccagac gagccctgcg cgacgcgtct ccggcatgag ccagacggcg
     1261 gccgcgagta acaatgcaac gacgccgagg tacgccacgg agccggcctc gccgtacaga
     1321 cggtagccgt ggtgcgctcc gaacgcgtga tgcggcgccg ggacaatcag cgcgagcaag
     1381 tccgtggacc agtcttccgt gacggtggcc atcgcttcgc cgagtgcgct ccgtgactgc
     1441 acgtatggaa cgacgagcgg cccgaccagg acgagacatg cgagaccgaa atagagcgtc
     1501 gtcttccaaa agcgaacgtc cctgaagcgc cgcgtctgcc aggcctcgaa cggcacgagc
     1561 acgagcagcg cgacgctcgt catgagaaaa agatggacgc ccgtgagcag cacgcacgcg
     1621 agcgccgctg ccgcgagcca gacggcgcgc ggcttgtcgc gccacgcgcg gaatagtccc
     1681 agaaaaacca gcggaatgaa gcccgtgttc gcgaggttcg ggtgctgcat cgcgcgcgtg
     1741 atgcgatacg gatcgaaggc gaacacgaag cccgagatcc acgccgcgag cgcgtccttc
     1801 gtgaggtaga gcgcgagcgc gaacatgctg cccgcgcaga gcaacgtctc gagcaggaac
     1861 gtgaggttgt aactcgcgac ggcgccgaag agcgcgcgga gcgggagcgc gacgagcgcc
     1921 gtgagccagc tgatgctgtg atagacgagg ctcacgcccg tcggataaaa gaggtgccgc
     1981 gtgtagaagg gcgaagcgtg cgtcgagaac gccttggcga gccaccaatt gtcccagagc
     2041 gcgatcgact ggtcgccgac gcggccgacg ggactcgctc ctacgttcgg gagcacgggc
     2101 cacgtgaacc agacgacgac cagcgcgtag gcgccgagcg caacgagcgc ccgccgccgc
     2161 gcaacgagct cgccgagccg agcgctaagc gacttgagcg ccggaatccg cgctgacagc
     2221 ggcttcacgc gtggcctgag cgaggttgtc gctgcgggcg gcggcgttct cgttcacctt
     2281 gacgctcacg atgcgggaca cgcccggctc gcccatggtg acgccgtaga gcacgtcggt
     2341 gctctgcatc gtctttttga tgtgcgtgat gagcacgaac tgcgactgcg aggtgagcgc
     2401 gcgaatcatt tcgttgtaac gagtgacgtt cgcctcgtcg agcggcgcgt cgacctcgtc
     2461 caggatgcag aagggcgagg gacggtgctg gaagatggcg aagatcaggc tcaccgcggt
     2521 gagcgccttc tccccgccgc tcatgagctc gatgttgccg agcttcttcc ccggcggctg
     2581 cgccaggatc tcgatgcccg tctccagcat gtcctccggg ttcg
//
LOCUS       DATIML010001045         1819 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1379560, whole genome shotgun sequence.
ACCESSION   DATIML010001045 DATIML010000000
VERSION     DATIML010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1379560"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1711
                     /locus_tag="VLJ38_18065"
     CDS             113..1711
                     /locus_tag="VLJ38_18065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HSU41491.1"
                     /translation="MNNLAPLLAREVARRRTFAIIAHPDAGKTTLTEKLLLFGGAIQL
                     AGAVKARGEQRRARSDWMKVERERGISVTASAMNFEYEGRVLNLLDTPGHQDFSEDTY
                     RTLTAVDSAVMVLDAARGIETQTRKLFEVCRLRNVPIVTFVNKLDREGREPFELMDEV
                     ERDLALSVAPLSWPIGMGRSFLGCYDLMRDRLLLSARSRDRIAEEGIECRGLGDPKLD
                     ELLPENAAKTLREEVEMTRALCPAFDLAEFRAGHQTPMFFGSAITSFGVRELLRGICE
                     LAPGPMPRRTREREVKPAETKVTGFVFKVQANMDPKHRDRVAFVRLCSGHFQRGMKLT
                     HVRSGEKLTVHNPVLFLAQDRELAEEAYAGDVIGIPNHGKLGIGDALTEGETLAFMGI
                     PSFAPELLQRVRPTDPLRAKHLGRALEQLAEEGAARVFRPRLGANHIVGVVGALQFDV
                     LADRIKNEYDVPVVFEASGLYTARWVEADDGPTLTRFAAANEAYVADDHQGALVFLAR
                     NAWHLETTEKENPKIRFLKTREYS"
BASE COUNT          323 a          615 c          604 g          277 t
ORIGIN      
        1 gccggttgcc cctgtcgcga ccagcgtcca ggcggccccg gccggagagt aggaattccc
       61 tggaaaaccg gcagaaaacc actacattcc gccgggtttt agagatcgga caatgaacaa
      121 cctcgcaccc ctgctcgcac gggaagtggc tcggcgccgc acctttgcca tcatcgccca
      181 ccccgacgcc gggaaaacca cgctcaccga aaagctgctg ctgttcggtg gcgcgattca
      241 gcttgccggc gcggtgaaag cgcgcggcga gcagcggcgc gcgcggtcgg actggatgaa
      301 ggtcgagcgc gagcgcggca tttccgtcac ggcgtcggcg atgaatttcg agtacgaggg
      361 gcgcgtcttg aacctactcg acacgccggg ccaccaagac ttcagcgaag acacctaccg
      421 cacgctcacg gcggtggact cggccgtgat ggtactcgac gcggcgcgcg gcatcgagac
      481 gcaaacccgc aagctcttcg aggtgtgccg gctgcgcaac gtgcccatcg tcacgttcgt
      541 caacaagctc gaccgcgagg gccgcgagcc cttcgagctg atggacgaag tggagcgcga
      601 tctggcgctc tcggtcgcgc cgttgagctg gcccatcggc atgggacgta gctttctcgg
      661 ctgctacgac ttgatgcgcg accggctgct cttgagcgcg cgctcgcgcg acagaatcgc
      721 ggaggaaggc atcgagtgcc gcgggctcgg cgatccgaag ctcgacgagc tcttgcccga
      781 aaacgcggcc aagacgctgc gcgaagaggt cgagatgacg cgcgccttgt gcccggcctt
      841 cgatctcgcc gagttccgcg cgggccatca gacgccgatg ttcttcggca gcgcgatcac
      901 gagcttcggc gtgcgcgagc tcttacgcgg catttgcgag cttgcgcccg gaccgatgcc
      961 gcgccgcacg cgcgagcgtg aagtcaagcc agcggagacc aaggtgacgg gcttcgtgtt
     1021 caaggtgcaa gcgaacatgg acccgaagca ccgcgatcgc gtggcgttcg tgcgcctgtg
     1081 ctcgggtcat ttccagcgcg gcatgaagct tacgcacgtg cgcagcggcg agaagctcac
     1141 cgtgcacaac cccgtgctct tcctggccca agatcgggag ctcgccgagg aagcctacgc
     1201 cggcgacgtg atcggcatcc cgaaccacgg caagctcggc atcggcgacg cgctgacgga
     1261 aggcgaaacc ctggcgttca tgggtattcc gagcttcgcg cccgagctct tgcagcgcgt
     1321 gcgtccgacc gatccgctgc gcgccaagca tctcggccgc gcactcgagc agctggcgga
     1381 agaaggtgcg gcgcgcgtct ttcgaccccg gctcggagcg aaccacatcg tgggcgtcgt
     1441 cggagcgctc cagttcgacg tgctcgccga ccgcatcaag aacgaatacg acgtgcccgt
     1501 cgtgttcgag gcctcggggc tctacacggc gcgctgggtc gaagccgacg acggcccgac
     1561 gctcacccgt ttcgccgccg cgaacgaagc gtacgtcgcc gatgaccacc agggcgcgct
     1621 cgtctttctc gcgcggaacg cctggcacct cgaaaccacc gaaaaagaaa acccgaagat
     1681 ccgcttcctc aagacgcgcg agtactcctg accggcggcg ccggcgcgtt cgtgcgtcaa
     1741 agctcggagc ggcacgcgca ttcgagctcc acgggggcgg gcgggcgctc gtcggcgcgt
     1801 cagcgcttac cgcgcggcg
//
LOCUS       DATIML010001046         4886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_800684, whole genome shotgun sequence.
ACCESSION   DATIML010001046 DATIML010000000
VERSION     DATIML010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_800684"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="VLJ38_18070"
     CDS             <1..284
                     /locus_tag="VLJ38_18070"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HSU41492.1"
                     /translation="PDKLSQIRRDNPLAAFNANWDPRRLELTSFNEQARRVRLEGVAL
                     DGEDVSELARRLNLSDYFSNVVLLPGKQEKDPKTGLAVVRFSLEAQVKY"
     gene            284..904
                     /gene="pilO"
                     /locus_tag="VLJ38_18075"
     CDS             284..904
                     /gene="pilO"
                     /locus_tag="VLJ38_18075"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HSU41493.1"
                     /translation="MALADQLAKLPVAARVGVSALLLALAGVAYYVVFYGDLASAIEA
                     AQSREQQLKVDLADARKAEFAYQKDLAELNDRQQRQRELNKVLPVTSEYPAFLSAVQN
                     VANVAGVDLISWTPSPEVPEQFYVRVPMKLEVSGRYHQIAKFFYGVSQLDRIINLENV
                     NLGKPEVKGEDVFVHADVLATAFRAAEDAKDAGSDKRGGAMKQGSP"
     gene            901..1506
                     /locus_tag="VLJ38_18080"
     CDS             901..1506
                     /locus_tag="VLJ38_18080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HSU41494.1"
                     /translation="MSRRKQGAVVLLAAWTLAACGDKVEVSPPSPAPPAAASAAAPAP
                     AAPKPADSAVAGRREFPEAEFTETERSRDPFRSFAHNFVEQAKSAVKSQREVVLSEFA
                     VDDLKLVGIVTRIEPARAMLVDPTGKGHVVHRGDFVGRADVVQLGGQTGATYQLNWRL
                     DRIRDGDVVLVREDPNNPDVPAATKVIPLRPESADDKNKGG"
     gene            1631..3955
                     /gene="pilQ"
                     /locus_tag="VLJ38_18085"
     CDS             1631..3955
                     /gene="pilQ"
                     /locus_tag="VLJ38_18085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HSU41495.1"
                     /translation="MRSFPRHLLLGPASLAAPLAFMLGLGLASTAQAAESERKATHVE
                     VSKAGAAETRIVVSFDASPTFTARLDRQKNRLIVDVPQAVLEGVPPALTERIGIVGGV
                     MAQSFAVIGGHTTRLLVTLLEEAAYGIAVEGNSLVIRVAPKRLGLPAAAPSSANGAAA
                     PAAKAPTATRVRDVRFEHASDEDRVFVELGEDTEFREPVVKDGRARLVLEGARLPDEL
                     VRELDVSAFGGGVSSVSSYAGQSEPNTVVLEAEVSKGVTSRVQRRGNSLVWTFADPAK
                     QMPSQSGVARDGGIARRTRTVTVEDAVRDVPRVYDGYSPEQGLVERTAGADAAGFAPS
                     ALGQQRNFTGRRIDLDLKDADIHNVLRLLADVGQVNVVTADNVTGSVTIKMRNVPWDQ
                     ALDVVLQSKGLGMVRGGNMIRVAPLADLEKERELQLARRAQEVKLAPLETRLIPVSYA
                     SAKEIQERARPLLSERGTLAVDDRTNVLIARDIAGNLNQIEELIRSLDTQTPQVLVEA
                     RIVEATSRYLRDVGIQWGGDGTFSAATGNPTGLAFPNSVGVVGGASDANTPTAGLSPF
                     ANTVASPNFAVNLPAAVGTGSGGAIGLSLGSVDNTVNLAVRLSAAEASGLLRILSSPR
                     ILTLDNHEARIAQGTLIPFSQVSAQGVQTTFQEAKLQLLVQPHVTADGSVSMHVKINR
                     DEPDFNQTSARGDPTILKREAETELLVMDGHTAVIGGIYTRNTGRNLDQVPFFGDIPL
                     LGLLFQRRRASDQRSELVIFLTPRIVNRAEALGR"
     gene            complement(3958..>4886)
                     /locus_tag="VLJ38_18090"
     CDS             complement(3958..>4886)
                     /locus_tag="VLJ38_18090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41496.1"
                     /translation="ELVGFAALMNGAVAYHRNRFRDARRELRDAVSNLRACAAVEWEL
                     DCAHIYDQMSAYGCGDYADLARTTPALAEEARRRGRVWAYTMLSGFAAAPAWLTPDDP
                     DGYRAQIAEVKLHWRPSEKPLWPDYVLLMGETMLAIYAGDPKSAFELLAAHHEVYSRS
                     QLTRGSGIGSSGYAFHRSRAAAGTLRSADATTSPALRRAAVGTLEEAMATLRAHGIDR
                     SLGMARAIEAALALERADRAAARDALAGAVEHFDAGDTAILAASARFRLGELTGGERG
                     DALIRTAEAELRAQSVQNIDAMVELHCPGCRA"
BASE COUNT          811 a         1680 c         1654 g          741 t
ORIGIN      
        1 cgcccgacaa attgagccaa attcggcggg acaacccgct cgcggccttc aacgccaact
       61 gggacccgcg tcggctcgag ctcacgagct tcaacgagca ggcgcgccgc gttcggctcg
      121 agggggtcgc gctcgacggc gaagacgtga gcgagctcgc gcgccgcctc aatctgtccg
      181 actacttcag caacgtggtg ctcttgccgg gcaagcagga gaaggacccg aagaccggcc
      241 tcgccgtcgt ccgcttctcg ctcgaagcgc aggtgaagta ctgatggcgc tcgcggacca
      301 actcgccaaa cttccggtcg cggcccgtgt cggcgtgagc gcgctcttgc tcgcgctcgc
      361 gggcgtcgct tactacgtcg tcttttacgg ggatctcgcg agcgcgatcg aagccgcgca
      421 gagccgcgag caacaactga aggtcgacct cgctgacgcg cgcaaggccg aattcgcgta
      481 ccagaaggat ctcgccgagc tcaacgaccg gcagcagcgc cagcgcgagc tcaacaaggt
      541 attgcccgtc accagcgaat atcccgcctt cttgagcgcg gtgcagaacg tcgccaacgt
      601 ggccggtgtc gacctcatct cctggacccc gagccccgaa gtgccggagc agttttacgt
      661 gcgcgtgccg atgaagctcg aggtgagcgg gcgctaccac cagatcgcca agttcttcta
      721 cggcgtgagc cagctcgatc gcatcatcaa cctggagaac gtgaacctcg gcaagccgga
      781 ggtgaagggt gaggacgtgt tcgtgcacgc cgacgtgctc gcgaccgcat tccgcgccgc
      841 cgaggacgcg aaggatgcgg gttcggacaa acgtggtggc gccatgaagc aggggtcgcc
      901 atgagccgaa ggaagcaggg cgccgtggtg ctcttggccg cgtggacgct cgcggcgtgc
      961 ggcgacaagg tggaagtgtc gccgccgtcg cccgcgccgc cggccgccgc ctctgccgct
     1021 gcgcctgcgc ccgccgcgcc gaaaccggcc gactccgccg tcgccgggcg gcgtgagttc
     1081 cccgaggccg agttcacgga gaccgagcgc agccgtgatc cgttccgctc gttcgcgcac
     1141 aatttcgtcg aacaggcgaa gagcgcggtc aaatcgcagc gcgaggtcgt gctctcggag
     1201 tttgcggtag acgacctgaa gctcgtgggc atcgtcacac gcatcgagcc cgcgcgcgcg
     1261 atgctcgtcg atccgacggg caaaggtcac gtcgtgcacc gtggggattt cgtcggccgc
     1321 gccgacgtcg tgcagctcgg cggacagacg ggcgccacct atcagctgaa ttggcggctc
     1381 gatcgcatcc gcgacggcga cgtcgtgctc gtgcgcgaag atccgaacaa tcccgacgtg
     1441 ccggccgcga ccaaggtgat ccccctccga cccgagagcg ctgacgacaa aaataagggc
     1501 ggctgagtgc gccagccggg gggctgaagt tggcgcggaa tttgttcgtc tggtgcacga
     1561 aacgttacgc tccgaacggc ttgcccacgg tgcgtcacgg cgcgcgcggg cggcgctttc
     1621 ggagcgaaat atgcggtctt tcccccgcca cctcctgctc ggtcccgcct cattggcggc
     1681 gcccctcgcg ttcatgctgg ggctcggtct cgcctcgacc gctcaggcgg ccgagagcga
     1741 gcgcaaggcg actcacgtcg aggtttcgaa ggcgggcgcc gccgagacgc gcatcgtcgt
     1801 gagcttcgac gcttcgccga cgttcacggc gcggctcgat cggcaaaaga atcgcctcat
     1861 cgtcgacgtg ccgcaggcgg tgctcgaggg cgtgccgccg gcgctcaccg agcggatcgg
     1921 catcgtaggc ggcgtgatgg cgcaatcgtt tgccgtgatc ggcggacaca cgacgcgcct
     1981 gctcgtcacc ttgctcgaag aagcggcgta cggcatcgcc gtcgaaggca actcactcgt
     2041 gatccgcgtc gcgcccaagc gcctcggact ccccgccgcc gcgccgagca gcgcgaatgg
     2101 agcggcggcc ccggccgcga aggcacccac ggccacgcgg gtgcgtgacg tgcgcttcga
     2161 gcacgcgagc gacgaagatc gcgtgttcgt cgagctcgga gaggataccg agtttcgtga
     2221 gccggtcgtc aaggacggtc gcgcgcggct cgtactcgag ggagcccgcc tgccggacga
     2281 gctcgtgcgc gagctcgacg tgtcggcttt cggcggcggc gtgagcagcg tgtcgagcta
     2341 cgcgggccag agcgagccga acacggtcgt gctcgaagcc gaggtctcca aaggcgtgac
     2401 gagccgcgtg cagcgccgcg gcaattcgct ggtttggacg ttcgccgatc cggccaagca
     2461 gatgccctcg cagagcggcg tggcccgcga cggcggcatc gcgcgccgga cgcgcacggt
     2521 gacggtcgag gacgccgtgc gtgacgtgcc gcgcgtgtac gacggctact cgccggaaca
     2581 aggcctggtc gagcgaacgg cgggggccga cgcggctggg ttcgcgccct cggccctcgg
     2641 ccaacagcga aacttcacgg gccggcgcat cgatctcgat ctgaaggacg ccgacatcca
     2701 caacgtgctg cgcctgctcg ccgacgtggg acaggtgaac gtcgtgacgg ccgacaacgt
     2761 gaccggctcg gtcacgatca agatgcgcaa cgtgccctgg gatcaggcgc tcgacgtcgt
     2821 cctgcagagc aagggcctcg gcatggtgcg cggcggcaac atgatccgcg tcgcgccgct
     2881 cgccgacctc gagaaagagc gtgagctgca gctcgcgcgg cgggcgcaag aagtgaagct
     2941 cgcgccgctc gagacgcggc tcattcccgt gagctacgcg tcggccaagg agatccagga
     3001 gcgcgcgcgc cccctgctca gtgagcgcgg gacgctcgcc gtcgatgacc gcaccaacgt
     3061 gctcatcgcg cgggatatcg ccggaaacct caatcaaatc gaagagttga ttcgctcgct
     3121 cgacacgcag acgccgcaag tgctcgtcga ggcgcgcatc gtggaagcga cgagccgcta
     3181 cttacgcgac gtcggcatcc agtggggcgg cgacggcacg ttttccgcgg cgaccggtaa
     3241 cccgacggga ctcgcgttcc ccaattccgt cggcgtcgtc ggcggcgcga gcgacgccaa
     3301 cacaccgacg gccgggttga gccccttcgc caacaccgtc gcgagcccga acttcgcggt
     3361 caatctgccc gccgccgtcg gcaccggctc cggcggcgcg attggtctct cgctcggctc
     3421 ggtcgacaac accgtgaacc tcgccgtgcg cttgtccgcg gccgaagcga gcggtctttt
     3481 gcgcatcctc tcgagcccgc gcatcttgac gctcgacaac cacgaggcgc gcatcgctca
     3541 aggcaccttg attccgttct cgcaggtgag cgcgcagggc gtgcagacca cgttccagga
     3601 agccaagctg cagctcctcg tgcagcccca cgtcaccgcc gacggtagcg tcagcatgca
     3661 cgtgaagatc aaccgcgacg agccggactt caaccagacc tcggcgcgcg gcgatcccac
     3721 gattttgaag cgcgaggccg aaaccgagct cctcgtgatg gacggtcaca cggccgtcat
     3781 cggcggcatc tacacgcgca atactggccg taacctcgac caggtgccgt tcttcggcga
     3841 cattccgctg ctcggtctct tgttccagcg ccgccgcgcg agcgatcaac gcagcgagct
     3901 cgtgattttc ctcacgcccc gtatcgtgaa ccgcgccgaa gcgctcggac gctagtccta
     3961 agcccgacag cccgggcagt gcagctccac catcgcgtcg atattttgga cgctctgagc
     4021 gcgcaattct gcttcggccg ttcgaatcaa ggcgtcgcca cgctcgccgc ccgtgagctc
     4081 ccccaggcga aagcgcgcgg aggcggccaa aatggcggtg tcgcccgcgt cgaagtgctc
     4141 gacggcgcct gccagtgcgt cacgcgccgc ggctcgatcc gcgcgctcga gcgcgagcgc
     4201 cgcttcgatc gcgcgcgcca tcccgagcga gcgatcgatg ccgtgggcac gcagcgtcgc
     4261 catcgcctct tcgagcgtgc cgacggctgc tcgccgcagc gccggcgagg tcgtcgcgtc
     4321 ggcgctccgt aacgtgccgg ccgccgcgcg cgagcgatgg aaagcgtaac cggagctgcc
     4381 gataccggag ccgcgcgtga gctgggagcg gctgtacacc tcgtgatgcg cggcgagcag
     4441 ctcgaacgcg ctcttcggat cgcccgcgta aatagcgagc atcgtttcgc ccatgaggag
     4501 gacgtagtcg ggccagagcg gcttctcgct cggccgccag tgaagcttca cttccgcgat
     4561 ctgcgcgcgg tagccgtccg ggtcgtcggg cgtgagccag gccggtgccg ccgcaaaacc
     4621 gctcaacatc gtgtaggccc agacccgccc gcggcgccgg gcctcctcgg cgagagccgg
     4681 tgtcgtgcgg gcgagatcgg cgtagtcgcc gcagccatac gcgctcatct gatcgtagat
     4741 gtgcgcgcaa tcgagctccc attcgacggc cgcgcaggcg cgcaagttgg agacggcgtc
     4801 acggagctct cgccgcgcgt ctcgaaatcg attgcgatgg taggcgacgg ctccgttcat
     4861 cagggccgcg aagccgacga gctcgg
//
LOCUS       DATIML010001047         1624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3109416, whole genome shotgun sequence.
ACCESSION   DATIML010001047 DATIML010000000
VERSION     DATIML010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3109416"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(266..>1624)
                     /locus_tag="VLJ38_18095"
     CDS             complement(266..>1624)
                     /locus_tag="VLJ38_18095"
                     /inference="COORDINATES: protein motif:HMM:NF013988.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMMECR1 domain-containing protein"
                     /protein_id="HSU41497.1"
                     /translation="PRLGRVPAGTPIVSLYLDGALRGCTGMSEGPPRQRLARAFLQAL
                     GDSRFGGVAHTERDRLVAQVAYPVRMERLSLDRVEQRLAPGTQGLVLSWPGEPPVVLL
                     PDVAREHELDAAGFLGAMEHKVGLARSGWGSHRLHAFETDGVVVRPRAPRPGAGVGAS
                     RPRAAPLAASRAARLELDPAAAALRWLERQVATDGAVTFGVEPRSGERHGDGLMSHGR
                     AAVVVQALALHARGRKAAQRARAWLERDIDRGLAGRLATFPREVPLVAGTLALAKLAG
                     IAVEAPLREIAASPALQLEPWHAAQVVCALGADAPAELYRACVNALASEPRAPWTALA
                     ARALGDRATHARVARTLAACVPKDGAHAGGVGPGTLPEVALTALVVEALAGATEPAAR
                     TARARALAFVLGEQHLARVPPDIAEPELAFGAFPLTPVHAYLRSDVTAHALLALESVR
                     ND"
BASE COUNT          241 a          594 c          583 g          206 t
ORIGIN      
        1 ccgtccaaag gattcggtgg caaaccatgc cgcgcttcgg acgcgccccc gcatccggtg
       61 acctgtggcg ccccgatcgc cgcgagcagg agcagcaaga gaggatcccg acgcgtcccc
      121 gagcaaaggc gtttcacccc cgaaggtcct gcaaccgacg tgccggcaaa gtaggcacaa
      181 cttggcacgt cgagttcgtt gccgtctatg actcgactac cggctcgatg attgggtgcc
      241 gtgacttagt gcgggcccac ggaggctagt cgttccgcac cgactcgaga gcgaggagcg
      301 catgcgccgt cacgtcgctt cgcaggtacg cgtgcacggg cgtgagcggg aaagctccga
      361 acgcgagctc gggctcggcg atgtccggtg gtacgcgcgc gaggtgctgc tcgccaagca
      421 cgaacgcgag cgcacgggcg cgtgcggttc gcgcggccgg ctccgttgcg cccgcgagcg
      481 cctccacgac gagcgcggtc aacgcgactt ccggcagcgt tccagggccg actccgcccg
      541 cgtgcgcgcc gtccttcggg acacacgccg cgagcgtacg cgccacgcgt gcgtgcgtcg
      601 ctcgatcgcc gagggcacgg gccgcgagag ccgtccacgg cgcgcgcggt tcgctcgcga
      661 gcgcgttcac gcacgcgcga tagagctcgg ccggcgcgtc ggcgccgagc gcacacacga
      721 cttgagcggc gtgccacggt tcgagctgca gcgcggggct cgccgcgatt tcccggagtg
      781 gcgcctcgac ggcgataccg gcgagcttgg caagcgccag cgttcccgcg acgagcggca
      841 cctcacgcgg aaacgtcgcg agccgcccag cgaggccgcg gtcgatgtca cgctccagcc
      901 aagcgcgcgc gcgctgcgcg gccttgcgcc cgcgagcgtg cagcgcgagc gcttgcacga
      961 cgacggcggc gcggccatgg ctcatgagcc cgtcgccgtg gcgttcgccg ctgcgcggct
     1021 cgacgccgaa cgtaaccgcg ccgtcggtcg ccacctggcg ctcgagccag cgtaacgcgg
     1081 cagcggcggg gtcgagctcg agcctcgcgg cgcgtgacgc agcgagcggc gccgctcgtg
     1141 gccgtgacgc accgaccccc gcgcccggcc gtggcgcccg ggggcgtacg acgacgccgt
     1201 cagtctcgaa cgcgtgcagc cgatgcgaac cccacccaga tcgtgcgagc cccaccttgt
     1261 gctccatcgc gcctagaaaa cccgccgcat cgagctcgtg ctcgcgcgcc acgtccggca
     1321 gcagcacgac gggcggctct ccaggccacg acagtacgag accttgcgtg cccggcgcga
     1381 gtcgttgctc gactcggtcg agcgagagac gctccatgcg tactggatac gccacttgcg
     1441 cgacgaggcg gtcgcgctcg gtgtgcgcga cgccgccgaa acgcgagtcg ccgagcgcct
     1501 ggaggaatgc gcgcgcgagc cgttggcgcg gcggcccttc gctcatcccc gtacagccgc
     1561 ggagcgcgcc atcgaggtaa agcgagacga tgggcgtgcc ggccggcact cggccgaggc
     1621 gcgg
//
LOCUS       DATIML010001048         3934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_800952, whole genome shotgun sequence.
ACCESSION   DATIML010001048 DATIML010000000
VERSION     DATIML010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3934
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_800952"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..1012)
                     /locus_tag="VLJ38_18100"
     CDS             complement(176..1012)
                     /locus_tag="VLJ38_18100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41498.1"
                     /translation="MQKLIPSLVAACVAGRILIAISPASANPRPLPFTYQHEQLAAGQ
                     SEIEQFVDFTPTRASDGTTGELAWYGLTNYTTEFETGLTDRLELGLYLTLVPTPPADR
                     FTAVPTGIESNGIKQRLRYSLAPSGLWPIDVSLYGELSENDHEFELEAKILLQRRIGI
                     ARIIANLSAEQEFYYNGKEHDFVANPSLGVTFEASQRVQPGFEVWMRGEWDEDAEGGE
                     HSRPFELGPHVYAGPTLLLQFGRLWWSNGVYIRTTDRSHTLAAGESYGDLWARTIIGI
                     GL"
     gene            complement(1023..1574)
                     /locus_tag="VLJ38_18105"
     CDS             complement(1023..1574)
                     /locus_tag="VLJ38_18105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41499.1"
                     /translation="MHGKRRSFAVGTCALALGVLSCSGGAGGADDGAGGSGTFLAFSK
                     DFRGYHSWQSYDVTDDADLAGIHDGSTVIEYINELPPSGLTEFPVGSIIVKEATGGTL
                     SHELFAMVKRGGNFNAGLPGWEWFDLLNIDDGKDSVKIVWHGFGPPDGESYGGDASSG
                     CNTCHLACNNDGVCATPLKLSNF"
     gene            complement(1577..2620)
                     /locus_tag="VLJ38_18110"
     CDS             complement(1577..2620)
                     /locus_tag="VLJ38_18110"
                     /inference="COORDINATES: protein motif:HMM:NF020932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imelysin family protein"
                     /protein_id="HSU41500.1"
                     /translation="MQYHSLLFASALFVAACSSEPAGPKTDADYEQDVILGMHDALLS
                     DIDALHRSARAIVAAAPTHAWDADADAASITAMQNAWLAARAAYERTEGALAPLFPDI
                     DAEIDARYDDFMESLSPDGDEDLFDGQGVTGMHAIERILYAPTTPADVIALESTLEGY
                     KAAAWPGTDEHALAFKNELCQKLVTDTGTLEAQWAPSAIDLQGSFDGLIALMNEQREK
                     VNKAASEEEESRYAQRTMADIRDNLSGTKKIYGLFRPWLGTKSDGKAVDGDVQAAFDG
                     LAAAYAAVEGDAIPVPPADWSSESPSAAALATPFGELYTAVQAAVDPNRPGSAVDGMN
                     RAAIALGFQQFVP"
     gene            complement(2626..3876)
                     /locus_tag="VLJ38_18115"
     CDS             complement(2626..3876)
                     /locus_tag="VLJ38_18115"
                     /inference="COORDINATES: protein motif:HMM:NF018269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme oxidoredictase family protein"
                     /protein_id="HSU41501.1"
                     /translation="MSPRTRALFCFTPFALLACSSSPSETTSARPTRTTTTSVDAFDV
                     PIAGIASEFLADFNDGDLLFSTPLRASDGLGPLYTRTSCGSCHDKANRGPGLVQKMAL
                     VEDDGVTPASDQSELAFGHTVHPLTAGGGVTPILPPDDPHVKVTTRFGPPVLGRGYLE
                     AVSDDEILRVEAEQAAREDDIHGHVNWVSYASEPNADTRFHEYQKGDTLIGRFGLKAR
                     VPALDDFTADAFQGDMGITSPLRPTEFENPDGLTDDDKPGVDVGFDSVNLRADYVRLI
                     AIPRRTSDTSGAALFASTQCSVCHVPSLRTRADYPIDALADIDAPVYTDLLLHRMSDE
                     LADGLPADPGVDGQADSFSWRTAPLIGLRFDRTFLHDGRAKSVTEAIQLHRGTGSEAN
                     ASLDAFAALSADDQASLVNFVEGL"
BASE COUNT          646 a         1231 c         1375 g          682 t
ORIGIN      
        1 accgtcgtag caagagctca gcaacgcccc cgctgcgtgc cgcgcgcgct acatttcgaa
       61 tcgtgggcaa gctcggggac gcgagcgcca cgaattctgt caaggcaaat cggagatcag
      121 aagcgacgcg ttaggcggcg agcggtcgat ccgcagaacc gttcggtgct ctgcgctaaa
      181 gcccgatccc gatgatcgtc cgcgcccaca gatcgccata cgactcgccg gcggcgaggg
      241 tgtggctgcg atcggtcgtc cgaatgtaga cgccgttcga ccaccacaaa cgaccgaatt
      301 ggagcaacag cgtcggtccc gcgtagacgt gcggtccgag ctcgaagggt cgcgagtgct
      361 cgccgccttc cgcatcttcg tcccattcgc cgcgcatcca cacctcgaat cccggctgca
      421 cgcgctgcga cgcctcgaag gtcacaccga gcgacggatt cgccacgaaa tcgtgctcct
      481 tgccgttgta gtaaaactcc tgctcggccg agaggttcgc gatgatgcgc gcgatgccga
      541 tgcggcgctg cagcaaaatc ttcgcctcga gctcgaactc gtggtcgttt tcggagagct
      601 cgccgtagag cgatacatcg atgggccaga ggcccgaggg agcgaggctg tagcgcaagc
      661 gttgcttgat gccgttcgat tcgatgcccg tcggcaccgc cgtgaagcga tcggcggggg
      721 gcgtcgggac gagcgtcaaa tagagtccga gctcgaggcg atcggtgagc cccgtttcga
      781 actcggtcgt gtagttggtg aggccgtacc acgcaagctc tcccgtcgtg ccgtcgctcg
      841 cgcgcgtcgg cgtgaaatcg acgaactgtt cgatctcgga ttgtcccgcg gcgagctgtt
      901 cgtgctggta cgtgaacggc agcggccgcg gattggccga tgccggcgaa atggcgatga
      961 gtatgcggcc ggcgacgcac gccgcgacga gcgaaggaat gagcttttgc atgctacgcg
     1021 gcctagaagt tcgagagttt caggggcgtc gcgcacacgc cgtcgttgtt gcaggcgagg
     1081 tgacacgtgt tgcagcccga gctcgcgtcg ccgccgtagc tctcgccgtc cggcggaccg
     1141 aagccgtgcc agacgatctt cacgctgtcc ttgccgtcgt cgatattcaa aaggtcgaac
     1201 cactcccagc cgggcaggcc cgcgttgaaa ttgcccccgc gcttcaccat cgcgaagagc
     1261 tcgtgcgaca gcgtgccgcc cgtcgcttcc ttgacgatga tgctgccgac cggaaactcc
     1321 gtgagtccgc tcggcgggag ctcgttgatg tactcgatga ccgtgctgcc gtcgtggatg
     1381 ccggcgagat cggcgtcgtc ggtcacgtcg tacgactgcc aggagtgata gccgcgaaag
     1441 tccttgctga aggcgaggaa ggtcccgcta ccgcccgcgc cgtcgtcggc cccgcccgcg
     1501 ccgccgctgc aggagagaac gccaagcgcg agcgcgcagg tacctacagc gaatgagcgt
     1561 cgtttgccgt gcatggtcat ggtacgaact gctggaatcc gagcgcgatg gccgcgcgat
     1621 tcatgccgtc cacggccgaa ccgggacgat tgggatcgac cgccgcttgc acggccgtgt
     1681 aaagctcacc gaacggggtc gcgagcgcag cggcgctcgg cgactccgag ctccaatcgg
     1741 ccgggggaac gggaatggcg tcgccctcga ccgcggcgta cgccgcagcg aggccgtcga
     1801 atgccgcttg cacgtcgccg tccacggcct tgccgtcgct tttcgtgccg agccagggac
     1861 ggaagaggcc gtagatcttc ttcgtgccgc tgaggttgtc gcggatgtcg gccatcgtgc
     1921 gctgcgcgta gcgcgactcc tcttcttcgc tcgcggcttt gttcaccttc tcgcgctgct
     1981 cgttcatgag cgcgatgagc ccatcgaacg agccttgcag atcgatggcc gacggggccc
     2041 attgcgcctc gagcgtgccg gtgtcggtca cgagcttttg gcagagctcg tttttgaagg
     2101 cgagcgcgtg ttcgtccgtg ccgggccacg ccgcggcctt gtagccctcg agcgtcgatt
     2161 cgagcgcgat cacgtcggcg ggcgtcgtcg gcgcgtagag gatgcgctcg atggcgtgca
     2221 tgcccgtcac gccctgcccg tcgaagagat cctcgtcgcc gtccgggctg agcgactcca
     2281 tgaaatcgtc gtagcgagcg tcgatttcgg cgtcgatatc ggggaagagc ggcgcgagcg
     2341 cgccctcggt gcgctcgtag gcggcgcggg ccgcgagcca ggcgttctgc atcgccgtga
     2401 tcgaggcggc gtcggcgtcc gcatcccaag cgtgcgtcgg cgcggcggcg acgatcgctc
     2461 gagcggagcg atgcagcgcg tcgatgtccg agagcagcgc gtcgtgcatg cccagaatga
     2521 cgtcctgctc gtaatcggcg tccgtcttcg ggcccgcggg ctcggacgag caagcggcga
     2581 cgaacaacgc agaggcgaac aggagggagt gatattgcat ggcgttcaga gtccctcgac
     2641 gaagttgacg agcgaagctt ggtcgtcggc ggagagcgca gcgaacgcgt cgagcgacgc
     2701 gttcgcttcg gagccggtgc cgcggtggag ctggatggct tcggtcacgg atttggcgcg
     2761 accgtcatgc aagaacgtgc gatcgaagcg caggccgatg agcggcgccg tgcgccagct
     2821 gaacgagtcg gcttgaccgt cgacgccggg atcggccggt agcccgtcgg cgagctcgtc
     2881 gctcatgcga tggagcagga gatcggtgta gacgggcgcg tcgatatcgg cgagcgcgtc
     2941 gatggggtag tcggcgcgcg tgcgcagcga cggcacgtga cacacggagc actgcgtcga
     3001 tgcgaagagc gccgcgcccg acgtgtcgga agtgcggcgc gggatcgcga tcagccgcac
     3061 gtagtcggcg cgcaggttca cgctatcgaa gcccacgtcg acgccgggct tgtcgtcgtc
     3121 cgtgaggccg tccggattct cgaactcggt cggccggagc gggctcgtga tgcccatgtc
     3181 gccttggaac gcgtcggccg tgaaatcgtc gagcgcgggc acgcgcgcct tcaagccgaa
     3241 gcggccgatc aaggtgtcgc ctttttgata ctcgtgaaag cgggtgtctg cgttgggttc
     3301 ggaggcgtag ctcacccaat tgacgtggcc gtggatgtcg tcctcgcgcg cggcttgttc
     3361 ggcttcgacg cgtaggatct cgtcgtcgct caccgcctcg aggtaaccgc gcccgagcac
     3421 gggcggaccg aaacgggtcg tcaccttcac gtgcggatcg tcgggcggca gaatcggcgt
     3481 cacgccgccc cccgccgtga gcgggtgcac cgtgtgtccg aaggcgagct cggattgatc
     3541 gctcgcgggc gtgacgccgt cgtcctcgac gagcgccatc ttttgcacga gcccgggtcc
     3601 gcgattcgcc ttgtcgtggc acgagccgca ggacgtgcgc gtgtagagcg gtccgaggcc
     3661 gtccgacgcg cggagcggcg tgctgaagag taagtcgccg tcgttgaagt cggcgaggaa
     3721 ctcggacgcg atgcccgcga tcggaacgtc gaaggcgtcg acgctcgtcg tcgtcgtgcg
     3781 cgtcggacgt gcgctcgtcg tttccgacgg cgacgacgag caggcgagca aagcgaacgg
     3841 ggtgaagcaa aagagggcgc gcgttctcgg cgacatcggc gagcgacgta tactgcaaat
     3901 gaaagtcact atcaatttca actccctggc aagc
//
LOCUS       DATIML010001049         2683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5424095, whole genome shotgun sequence.
ACCESSION   DATIML010001049 DATIML010000000
VERSION     DATIML010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5424095"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VLJ38_18120"
     CDS             <1..312
                     /locus_tag="VLJ38_18120"
                     /inference="COORDINATES: protein motif:HMM:NF014033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP:cob(I)alamin adenosyltransferase"
                     /protein_id="HSU41502.1"
                     /translation="LNLRLLDSDDTARLERHIDATEVELEPLKNFVLPAGSPAAATLH
                     VARTVCRRAERRVIAARRETPVRDELVRYLNRLSDLLFVLAREANRHAGLGDAPWVPK
                     S"
     gene            320..1903
                     /locus_tag="VLJ38_18125"
     CDS             320..1903
                     /locus_tag="VLJ38_18125"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU41503.1"
                     /translation="MLPRAGDLIGGKYRIVRLIGDGGMGSVFEARHEGLGIPVALKFL
                     HEDLAERPGLTDRFLREARVAATIQSPHVAHVTDVDVGPGGLPYLVMELLHGESLQQV
                     LDRERKLSPQLAVDFALQIAGGLEAAHAVGVVHRDLKPDNVFVTPSTGGPFLKLLDFG
                     IAKLLANQEQRGLTRAGVVMGTAEYMPPEQLYAANEVDARADVYALGVMLFEMLSGRR
                     PADGEDAQIIVGKVLARDVLSLATLEPSLPRDLVELVERATAGDRDARIASAHELRLA
                     LARLATELSRAGAIAAQAAPIQPRGAVKTLPPDERDSFAKGATEQAPPFVPPFAPGPV
                     QLPQAPHAPHAPYAPHARPRRRRYGWLYSLIVIAMLGGGAAGAYFYWSNQSVNLPPPP
                     LDIATAPTSEVFAPEAQASAFTPTPTAAAPGPETAHEPHDAHASGTVPAPTATATATA
                     DAGTFPTPLQLPSTFPSTFPALPLPSTLPSGFPSAFPSAWHDVLPRGLPSVLPTTFPH
                     IPGLPPSPLENPSAPDAGH"
     gene            2130..>2683
                     /locus_tag="VLJ38_18130"
     CDS             2130..>2683
                     /locus_tag="VLJ38_18130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41504.1"
                     /translation="MAAHFEIAEARGDELISVGSFPSSRPGTALCVVAEDRPGLLATI
                     SASLVLSRLDVIEAEAYTRRRSGTADEAVDIFWVRHDPAELRKEPLGPEHIAQLKSTL
                     AGLLEGKLDRSRIGEARPTPTPSAVETVVRFIEGSDGSFATLEVETGDRSGLLLALSQ
                     ALFNQRVQIIASQVKTTGTRVYDR"
BASE COUNT          426 a          975 c          853 g          429 t
ORIGIN      
        1 ctgaacctgc ggctcctcga ctcggatgac acggcgaggc tcgaacgcca catcgacgcg
       61 accgaggtag agctcgagcc gttgaagaat ttcgtgcttc ccgcggggtc accggccgcg
      121 gcaactctgc acgtagcgcg cacggtttgc cgccgcgccg aacggcgtgt gatcgccgcg
      181 cgccgcgaaa cccccgttcg cgacgagctg gtccgttatt tgaatcgcct gagcgacctc
      241 ttgttcgtgc tcgcgcgcga ggctaaccgc cacgccgggc tcggtgacgc accctgggtg
      301 cccaagtcct agttatccca tgcttccccg tgcaggtgac ctcatcggcg gcaagtaccg
      361 catcgtccga ctgatcggcg acggcggcat gggcagcgtg ttcgaggcgc gccacgaggg
      421 cctcgggata ccggtcgcgc tcaaattcct gcacgaggac ctcgccgagc gtccgggact
      481 caccgaccgc ttcctacgcg aagcacgcgt cgccgcgacg attcagagtc ctcacgtcgc
      541 gcacgtgacg gacgtcgacg tcgggccggg cggcttgccg tacctcgtga tggagctctt
      601 gcacggcgag tcgctccagc aagtgctcga ccgtgagcgg aagctctcgc cgcagctggc
      661 cgtcgatttt gcgctccaga tcgccggtgg gctcgaagcc gcgcacgccg tgggcgtcgt
      721 gcatcgcgat ctgaagcccg acaacgtgtt cgtgacgccg agcacgggcg gaccattcct
      781 caagctgctc gatttcggca tcgccaagct gctcgcgaat caggagcagc gcgggctcac
      841 gcgagccggt gtcgtgatgg gcaccgccga atacatgccg cccgagcaac tctatgccgc
      901 gaacgaagtc gacgcgcgcg ccgacgtgta cgcgctcggt gtgatgctct tcgagatgct
      961 gagcggcagg cgccccgccg acggggaaga cgcgcagatc atcgtgggca aggtgctggc
     1021 gcgcgacgtg ctctcgctcg cgacgctcga gccctcgttg ccgcgcgacc tcgtcgagct
     1081 cgtggaacga gcaacggccg gtgaccgcga cgctcgcatc gccagcgcgc acgaactccg
     1141 gctggcgctc gcccgtctcg cgaccgagct cagccgcgcc ggcgcgatcg ctgcgcaagc
     1201 tgccccgatc cagccgcgcg gggccgtgaa gacgctgccg cccgacgaac gggacagttt
     1261 tgccaagggc gcgacggagc aagctccgcc gttcgttcct cctttcgcgc cgggaccggt
     1321 ccagctgccg caggcgccgc acgcgccgca cgcgccatac gcgccacacg cgcgacctcg
     1381 acggcgacgt tacggctggc tctactcgct catcgtgatc gcgatgctcg ggggcggtgc
     1441 ggcaggcgcc tatttctact ggtccaacca gtcggtgaac ttgcccccgc cgccgctcga
     1501 catcgccacg gcgccgacgt ccgaggtatt tgcaccggaa gcgcaagcga gcgccttcac
     1561 gccgacgccc acggcagcgg caccagggcc ggaaactgct cacgaaccgc acgacgccca
     1621 cgcgagcggc accgtccccg cccccacggc gacggcgacg gcgacggcgg acgcaggcac
     1681 gtttcccacg ccactgcagc taccgagcac ttttccgagc acctttccgg cgctgccatt
     1741 gccttcgacg ctgccgtcgg gatttccttc ggcgttcccc tcggcctggc acgacgtgct
     1801 accgaggggc ctgcctagcg tgcttcccac gacgtttccc catatccctg gcttacctcc
     1861 gagcccgctc gagaaccctt cggcgcccga tgccgggcat tgagcgcggc gcttgccccg
     1921 ttcgacacct tcctccgcgc cacgcacgct aacggccccg ttcacttgat cgacatccgt
     1981 cggaaatagg cgacccgtac gcttgctccg agctcatgct ggagtccgac cttccgagac
     2041 gcgccttgag aacgcccacc aacgctcccc cacccgagtt tgcgagctcg atgcccgaaa
     2101 gctatcgaaa gaatttcgat ggccgcgcca tggccgcgca tttcgagatc gccgaggcgc
     2161 gcggcgacga gctcatcagc gtgggcagct tcccatcgag ccgacccggc acggcgctct
     2221 gcgtcgtggc cgaggatcgg ccggggctac tcgcgacgat cagcgcgtca ctcgtgcttt
     2281 cgcgactcga cgtgattgaa gcggaggcgt acacgcgccg gcgctccggc accgccgacg
     2341 aggccgtcga tatcttttgg gtgcgccacg acccggccga gctcagaaag gagccgcttg
     2401 gccccgagca catcgcgcaa ctgaagagca ccctcgccgg tctgctcgag ggcaagctcg
     2461 atcgctcgcg catcggggaa gcgcggccga cgcccacacc gtccgccgtc gaaaccgtcg
     2521 tgcgcttcat cgagggcagc gacggctcgt tcgccacgct cgaggtggaa acgggtgatc
     2581 gttcgggcct tttgctcgcg ctctcgcagg cgctcttcaa tcagcgcgtg cagatcattg
     2641 cctcgcaagt gaagacgacg ggcacgcgcg tgtacgaccg ttt
//
LOCUS       DATIML010001050         2687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_220245, whole genome shotgun sequence.
ACCESSION   DATIML010001050 DATIML010000000
VERSION     DATIML010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220245"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..988)
                     /locus_tag="VLJ38_18135"
     CDS             complement(200..988)
                     /locus_tag="VLJ38_18135"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41505.1"
                     /translation="MLDRDYENVLFQRLRSDNDTRAADEIVRASLPSVVMIAQKYRRY
                     GLREGELIAEGNFGLVRALDKFDPARGIRFMTYATYWIRAYVIDYVIRSWSMVGAGSG
                     ALRSRHFFKLRRERSRVSNLLGEGEEAEKALAERVGVNPSRLGSMLRRLDARDVSLDV
                     PSTEGAPALAERLPAPDDVESSLAARQSIELVRRPIQSAVATLDARERYIVEHRLMAD
                     AEDELSLAQIGRNLGVSRERARQLEERVKKKLRARIAPEVAVAL"
     gene            complement(999..1547)
                     /locus_tag="VLJ38_18140"
     CDS             complement(999..1547)
                     /locus_tag="VLJ38_18140"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSU41506.1"
                     /translation="MAHQHHRQGRAGFRRPWWAGAMDDPAPRAERGEIRYLVLDAIRE
                     QPRHGYEVIQHVEQRARGTYRPSPGVIYPTLQMLEELGQARVAEAEGRKAYAITDEGR
                     AELERNARAVEDFYQRFEEESWETHAEDFAELMWRVARLVKTFKRGAKQGRMSPEVMR
                     GIRTVLDDALSGIEDVLNGKRR"
     gene            complement(1863..>2687)
                     /locus_tag="VLJ38_18145"
     CDS             complement(1863..>2687)
                     /locus_tag="VLJ38_18145"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HSU41507.1"
                     /translation="GARAPIEGLVTRRLLGARAARVPLVLLARVQLVFYAVSVCSPGG
                     RVLGEASKVALLGGRVGAPAASAIATASQAASLVADALVVLIGAGAIYELTGFGELTV
                     LALVFVLACVLLASVVVAAARAPRTPRVLERFPKLTQFLERWRRAARAQRLFAADVIA
                     LLFSARVAQVLLLGVALAAVGGGWSVLRAWSLLAVVLAGAAVGEPIPAQLGATDAALV
                     AAAPALGIDRAQAVTIGVLFHVAQLFWSILGVVAGAALRDGTPAPASAPSSEEQMN"
BASE COUNT          467 a          914 c          898 g          408 t
ORIGIN      
        1 atcctgatcg ttcctcgaaa gaccgcaggg gctcgctgag caaatggcat gccggcgcaa
       61 aaagcccgta aaagcgcgcg atcgcgtgcg cgaaggtgtg gttgtgcagg taacacctgt
      121 gccaacggcg ccgcggttca ccagtcgcgc tgcgcaattc gcgcaacgga ggcagatcct
      181 tgagtcctgg tgcttgggct cagagagcga cggcgacttc gggggcaatt cgagcgcgca
      241 gcttcttttt cacgcgttct tcgagctggc gcgcccgctc gcgggagacg ccgaggttac
      301 gaccgatctg ggcgagcgag agctcgtctt cggcatcggc catcagacgg tgctcgacga
      361 tgtaacgctc gcgcgcgtcg agcgtcgcga ccgcagactg gatcggccgg cgcacgagct
      421 cgatcgactg gcgcgccgcc aagctcgact cgacgtcgtc gggggcaggt agccgctcgg
      481 cgagcgcggg cgcgccctcg gtcgagggca cgtcgagcga tacgtcgcgc gcgtcgagac
      541 gccgcaacat cgagccgaga cgcgacgggt tcacgccgac gcgttccgcg agcgccttct
      601 ccgcttcctc gccttcaccg agcaagttgc tcacgcggct gcgctcgcgg cgcagcttga
      661 agaaatggcg agaacgcagc gcaccggagc ctgcgcccac catgctccag gagcgaatga
      721 cgtagtcgat gacataggcg cgaatccagt acgtcgcgta cgtcatgaag cgaatacccc
      781 gcgccgggtc gaatttgtcg agggcgcgca cgaggccgaa gttgccttcg gcgatgagct
      841 ccccctcgcg caggccgtag cggcggtatt tttgcgcgat catcaccacg gacggcaagc
      901 tcgcgcgcac gatttcgtcg gctgcgcgcg tgtcgttgtc gctgcgcagc cgttggaaga
      961 gaacgttttc gtagtcgcga tcgagcatga cgaacctctt agcggcgctt gccgttgagc
     1021 acgtcctcga tgccgctcag cgcgtcgtcg aggacggtgc gaatgccgcg catcacttcg
     1081 ggagacatgc ggccttgctt cgcgccgcgc ttgaaagtct tgaccaggcg agcgacgcgc
     1141 cacatgagct cggcgaaatc ttcggcgtgc gtctcccacg actcttcttc gaagcgctga
     1201 taaaagtcct cgaccgcgcg ggcgttgcgt tcgagctcgg cgcggccctc gtcggtgatc
     1261 gcgtacgcct tgcgtccctc ggcctcggcg acgcgcgcct ggccaagctc ctcgagcatt
     1321 tgcagcgtcg ggtagatgac gccggggctc ggacggtaag tgccacgcgc gcgctgctcg
     1381 acgtgttgga tcacttcgta gccgtgtcgc ggctgctccc gaatggcgtc gagcacgagg
     1441 tagcgaatct cgccgcgctc ggcgcgtggc gcagggtcgt ccatggcgcc cgcccaccag
     1501 ggccgccgaa agccggcccg accctggcga tgatgctgat gcgccatcca catccaagct
     1561 cctggcccgc aggccgatgc accgtgcatt ttctttgtcc tcgcttctga cgacgaatga
     1621 gcagtgccca gatcgacgtt tgaactcagt tttctgtgac cggggaccgc tcgaaccgtt
     1681 caagactggt cgccgatgta tctctagaca catctctaga catatctttt cgaacgtcaa
     1741 ccctgccagt tcgctctcac gccatgattt tagcggcggc ttaccgtaca ggtggatttc
     1801 gcaaagaacg caatccaggc gcggcttcgg gcggagaaac cagcccgggg tcacgaagcg
     1861 aatcagttca tctgctcttc actgctcgga gcgctcgccg gtgcgggggt gccgtcacgc
     1921 agcgcggcgc cagcgaccac gccgaggatc gaccagaaga gttgcgccac gtgaaagagg
     1981 acgccaatcg tgacggcctg ggcgcgatcg atgccgagcg ccggcgccgc ggcgacgagc
     2041 gccgcatccg tcgcaccgag ctgagccggg atcggctcgc ccacggccgc gcccgcgagc
     2101 accaccgcga ggagcgacca cgcgcgcagc acggaccagc cgccacccac cgccgcgagc
     2161 gcgacaccga gcaacagcac ctgcgcgacg cgcgcgctga acaagagcgc tatcacgtca
     2221 gccgcgaaca gccgctgcgc gcgcgcggct cgccgccagc gctccaggaa ctgcgtgagt
     2281 ttcggaaacc gctcgagcac gcgcggtgtg cgcggcgcgc gcgctgcggc gacgaccacg
     2341 ctcgccaaga gcacgcaggc cagaacgaag acgagcgcga gcacggtgag ctcaccgaag
     2401 ccggtgagct cgtaaatggc gccggcgccg atgagtacga cgagcgcgtc ggcgaccagg
     2461 ctcgcagctt ggctcgcggt ggcgatggcc gacgcggcgg gagcgcccac gcgtccgccg
     2521 agcaacgcga ccttggacgc ctcgccgagc acgcggccgc ccggcgagca caccgagacc
     2581 gcgtagaaga cgagctggac gcgcgcgaga agcacgagcg gcacgcgcgc cgcgcgcgcg
     2641 ccgagcaacc gccgcgtgac gagaccctcg atcggcgcgc gcgcccc
//
LOCUS       DATIML010001051         2089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4552087, whole genome shotgun sequence.
ACCESSION   DATIML010001051 DATIML010000000
VERSION     DATIML010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4552087"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..742
                     /locus_tag="VLJ38_18150"
     CDS             44..742
                     /locus_tag="VLJ38_18150"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSU41508.1"
                     /translation="MTQPALAYSRSELPPASTDRGGYTPVALAAIWDNLVSGRWSVVD
                     SFSVGDRSYLAFDLRAHESGRPRLTERQLEILERTLSAPCQKVVAIELGRTASTVAWS
                     LAQSLKAMGFSCQASRVPSFLVAAIHAHHGATDLVEARFRGWGEGSTAFGIASIPRPD
                     LCLAPLLTSTEYAVARLLADGNSRSEIAALRNASTRTVANQVSAVFRKLSVSGRLELL
                     AHAARTFRRADYGD"
     gene            1029..>2089
                     /locus_tag="VLJ38_18155"
     CDS             1029..>2089
                     /locus_tag="VLJ38_18155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41509.1"
                     /translation="MGSPSADMGLASPNPNDSRDGSGGTAGTTAAPGVGAPPPEQENE
                     ASYTAPVVSGHWIWSANPISGKVALIDAATMRVTTADAGLAPTYVAALGASTDTESSA
                     IVLNVGDDTASVLFASHGDISVETAKVHPGANRMTVSPSGRWALVWSDATLLSNPDPT
                     EGLQDVTVLDLGVTPAVSYPLTVGYRPSRVTLGTGEEHAYFVTDAGVSVVDLPLTDPP
                     SVARDVSVAVTPGEAATVRDVTVTPDGKAAVIRHEGSPTIGVIALDDGRELDVTLKGP
                     VTDLDLTPDGKLAFAVVRAVSTSSTGSGGNSAGTSATGTGGSVAGTGGSAAGTGGASS
                     GATGSGATSGDTAAPSTGGV"
BASE COUNT          310 a          727 c          723 g          329 t
ORIGIN      
        1 acatcggcgc tggaacggcc cttgctgaag ggctatcaac gccatgactc aaccggctct
       61 cgcctactcc cgttcggaac tgccgcccgc ttccaccgac cgtggcggct acacgcccgt
      121 ggctctggct gccatctggg acaacctcgt ttccggccgc tggtccgtag tagacagctt
      181 ctcggtcggt gaccgcagct acctcgcgtt cgatctgcgc gctcacgaaa gcggccgccc
      241 gcgcctcacg gagcgccagc tcgaaatcct cgagcgcacg ctgtcggcac cctgtcagaa
      301 ggtcgtggcg atcgagctcg ggcgcacggc gtccacggtc gcgtggtcgc tcgcgcagtc
      361 gctgaaagcg atggggttca gctgccaggc gtcgcgtgta ccgagctttc tggtcgcggc
      421 gattcatgcg caccacggcg ccacggacct ggtcgaagcg cgtttcaggg gttggggtga
      481 ggggtccacg gcgttcggca tcgcgagcat tccccgtccg gatctgtgct tggcgccgct
      541 cctcacgtcg accgagtacg ccgtcgcccg cttgctcgcg gacggcaaca gccgctcgga
      601 aattgcagcc ctccgcaatg cttcgacgcg cacggtagcg aaccaagtct ccgccgtgtt
      661 ccgcaagctg agcgtctccg gccgcctcga gctgctcgcg cacgcggcgc gcacgttccg
      721 tcgcgccgac tacggcgact gaatcactct cgcgcgggtc tcgtcgaacc gcgacacgat
      781 tgtcgcgggg acacgcgagt tggcggctga gttggctcac ttccgcaggc gcgccaccgg
      841 acgcgctgct cgggcgagca cgctgaattt cccacacgac gctcgccccg gcgtcgtgtg
      901 ccgcgcgcgt ggcccacggt ttgcactcct cgccactttg gttcgggcgc gaggtagggc
      961 atcccttggc acaccggcga cttacgatct tgggcttctt gggcatcggt tgggtgaatg
     1021 cctgtggcat gggcagcccc tccgccgaca tgggcctggc ctcgccgaac cccaacgact
     1081 cgcgtgacgg gagcggcggc acggctggga cgaccgctgc ccccggcgtc ggtgcaccgc
     1141 cgcccgagca ggagaacgaa gcttcctaca cggcgccggt cgtgagcggg cactggattt
     1201 ggtcggcgaa tcccatcagc ggcaaggtcg cgctcatcga cgcggcgacc atgcgcgtta
     1261 ccacggcgga cgcggggctc gcgccgacct acgtcgccgc gctcggcgcg agcaccgaca
     1321 cggagtcgtc ggcgatcgtg ctcaacgtcg gcgacgacac cgcgagtgtg ctgttcgcgt
     1381 cgcacggtga catcagcgtc gaaacggcga aagtgcaccc gggcgccaac cgcatgaccg
     1441 tgagcccgtc ggggcgctgg gcgctcgtct ggtcggacgc gacgttgctg tcgaaccctg
     1501 atcccacgga aggcttacag gacgtgacgg tgctcgatct cggcgtcacg ccggccgtct
     1561 cgtatccgct cacggtcggc tatcgcccgt cgcgcgtgac gctcggcacc ggggaagagc
     1621 acgcgtactt cgtgacggac gccggcgtga gcgtcgtgga tttgcccctt accgatccgc
     1681 cgagcgtcgc gcgcgacgtc tcggtcgcgg tcacaccggg cgaagccgcg accgtgcgcg
     1741 atgtcacggt cacgcccgac ggcaaggcag ccgtgatccg gcacgaaggc agcccgacca
     1801 tcggtgtgat cgcgctcgat gacggacgcg agctcgacgt gacgctcaag gggcccgtga
     1861 ccgatctcga cttgacgccg gacggcaagc tcgcgtttgc ggtcgttcga gccgtttcga
     1921 cgagcagcac cggcagtggc gggaacagcg cgggaacctc ggcgaccggc acgggcggga
     1981 gcgtcgcggg aactggcgga agcgcagccg gcaccggggg cgcaagctcg ggggctactg
     2041 gcagcggcgc gacgagcggc gacaccgcgg cgccgagtac gggcggcgt
//
LOCUS       DATIML010001052         3107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2241564, whole genome shotgun sequence.
ACCESSION   DATIML010001052 DATIML010000000
VERSION     DATIML010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2241564"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            336..1457
                     /locus_tag="VLJ38_18160"
     CDS             336..1457
                     /locus_tag="VLJ38_18160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-protein synthetase"
                     /protein_id="HSU41510.1"
                     /translation="MLAQTPIATSDALHARVRAFAAGEGAEDFETLALAVARFQAETS
                     LGFARLVASRGAKLERLEDVPGVPAETFRLARVAVHPPELDVARFVTSGTTSSEAGTH
                     AFRTTATYDAVALAFGRQALLGFGAGPRIVVSLAPPPGETPTSSLGYMMALFQREWDG
                     RSLADGSFEREHAARWLFGPDGLDLDGLEHAAAVAEKRGEPLLVLATAFALVALLDAA
                     RGRVLRVPPATAVMVTGGYKGRSREVSKAELRREVARTFGVPEMHVVAEYGMTELTSQ
                     LYECTLPGAALNGPRDILLEPPWLRVVPVDPATLAPVRDGELGIARIVDLANVDSALV
                     VQTEDLVRRRDGGIELVGRRPGATARGCSLAVEAWLGAS"
     gene            1454..2497
                     /locus_tag="VLJ38_18165"
     CDS             1454..2497
                     /locus_tag="VLJ38_18165"
                     /inference="COORDINATES: protein motif:HMM:NF017686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0008218 - bioluminescence [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA reductase"
                     /protein_id="HSU41511.1"
                     /translation="MNGRARVEALVASARHVAHGASELGRRARRLLVESTGLSPENVE
                     WSLREALETSPSAAELAALLASVEPARAAHVLLPANVFVAAHRALALALAASPVVRVR
                     ASRREPHFARLLLEGAPGLFELVDAIAPEPGEHVFAYGSDTTLAAVRASVPPGATLHA
                     HGSGFGIAVVDALHVDAKAARALALDIAAFDQRGCLSPRVGFVLGEGAAAARFAALLA
                     EALAEHARRVPLGRLDDAERADNVRFRDTAIYAGPLLAAGPSSVCVSEGAALIAPAGR
                     NLCVVPARELARVLAEVDASLVTAVGVAGSETLALDIARALPSARLSELGRMQRPAFD
                     GPADRRAALPLVP"
     gene            complement(2509..>3107)
                     /locus_tag="VLJ38_18170"
     CDS             complement(2509..>3107)
                     /locus_tag="VLJ38_18170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41512.1"
                     /translation="EPHAGSTVKPLLIALVLCVPLAACSSGDDSALSGAPLDCSWFTS
                     ENCWKRLVADAVSCVPPSDETGVLSDDGSACTYASGASVDFGLPVAFPLDSTSPWYFT
                     QSSSGDECVRFDSRAADELTLSVHGMTFVEKSSGFALQMTCPDGTQYVTENAPALFNC
                     TDYSSNAPGHVSHPSDTSAYFALLTGHGDALGVFDCGQ"
BASE COUNT          425 a         1105 c         1103 g          474 t
ORIGIN      
        1 acgtcgtacc gggccttgcc gatcggtagg ggctcgccga gtcggagccc agcagcgtgg
       61 agtcgccctc gctaccagcc acgcgacccg ttcaaccgca cacgacggca agtcgcatgt
      121 ggtccgccca gcgcgccggg acctctcacc tgcgcgcagc tcggctcgac tcggggttga
      181 cctgagccgc cggccgagcg agcacaggta agagggtccc cccgcgcgca gcgacagcga
      241 gcacgcgggc gcacccacgc cgtaccccgc cgggggagca tcacgacagc cacctttgac
      301 gctcgtgttc tttccttcca agatcgccga actcgatgct ggcccaaact ccgatcgcga
      361 cgtccgacgc gcttcatgcg cgggtacgcg ccttcgcggc tggtgagggc gccgaggatt
      421 tcgaaacgct cgcgctcgcc gtcgcgcgtt ttcaggccga aacgtcactc ggtttcgcgc
      481 ggctggtcgc gagtcgtggc gcgaagctcg agcggctcga ggacgttccg ggcgtgcccg
      541 cggagacgtt tcggctcgcg cgcgtggccg tgcacccgcc cgagctcgac gtggcgcgct
      601 tcgtcacgag cggcacgacg agcagcgagg ccggtacgca cgcgtttcgc accaccgcga
      661 cgtacgacgc ggtcgcgctc gcctttggta ggcaggcgct gctcggcttc ggcgcgggac
      721 cgcgcatcgt cgtgagcctc gcgccgccgc cgggcgagac gcccacgtcg tcgctcggct
      781 acatgatggc gctctttcag cgcgagtggg acggccgctc gctcgccgac ggcagcttcg
      841 aacgcgagca cgccgcgcgc tggctgttcg gtccggacgg cttggatctc gacgggctcg
      901 agcacgcagc ggccgttgcc gagaagcgag gggagccgct gctcgtgctc gcaacggcgt
      961 tcgcgctcgt cgctttgctc gacgcggcac ggggacgcgt gctgcgcgtc ccgcccgcga
     1021 cggccgtgat ggtgaccggc ggctacaagg gccgctcgcg cgaggtgtcg aaggcggagc
     1081 tccggcgcga ggtcgcgcgc accttcggcg tgccggagat gcacgtggtc gccgagtacg
     1141 gcatgacgga gctcacgagc caactttacg agtgcacgtt gccgggcgcc gcgctcaacg
     1201 ggccccgcga cattttactc gagccgccgt ggctgcgtgt cgtgccggtc gacccggcga
     1261 cgctcgcgcc ggtccgcgac ggcgagctcg gtatcgcgcg catcgtagac ctcgccaacg
     1321 tcgattcggc gttggtcgtg caaacggagg acctggtgcg gcgacgcgac ggcggcatcg
     1381 agctcgtcgg ccggcgccca ggggctacgg cacgcggctg ctcgctcgcc gtcgaagcct
     1441 ggctcggagc gtcgtgaacg gccgcgcccg cgtcgaagcg ctcgtcgcga gcgcacggca
     1501 cgtcgcccac ggcgcgagcg agctcggacg ccgagcgcgc cgcctgctcg tggaatcgac
     1561 cgggctttcg cccgaaaacg tcgagtggtc gctgcgcgag gcgctcgaaa cttcgccgtc
     1621 ggcggccgag ctcgccgcgc tcttggcgag cgtcgagccc gcgcgcgcgg cgcacgtcct
     1681 cctgccggca aacgtgttcg tggccgcgca ccgcgcgctc gcgctggcgc tcgcggcgtc
     1741 acccgtcgtg cgcgtgcgtg cgtcgcggcg cgagccgcac tttgcgcgct tactgctcga
     1801 aggcgcgccc ggactcttcg agctcgtgga cgccatcgcg cccgaacccg gcgagcacgt
     1861 cttcgcctac ggctcggaca cgacgctcgc cgccgtgcgc gcgtccgtgc caccgggtgc
     1921 aacgctgcac gcccacggct cgggcttcgg catcgccgtc gtcgacgcgc tccacgtgga
     1981 cgcgaaagcc gctcgcgcgc tcgcgctcga catcgccgcg ttcgaccagc gcggctgttt
     2041 gagcccgcgt gtcgggttcg tgctcggcga aggcgccgcg gctgcgcgtt tcgcggcgct
     2101 cctcgccgaa gcgctcgccg agcacgcccg gcgcgtcccg ctcggtcggc tcgatgacgc
     2161 ggagcgcgcg gacaacgtgc gttttcgtga cacggcgatt tacgcggggc cgctgcttgc
     2221 ggccggaccg agctcggtat gcgtgagcga gggagcggcg ctcatcgcgc ccgctgggcg
     2281 taacctgtgc gtcgtgccgg cacgggagct cgcgcgagtg ctcgccgagg tcgacgcgtc
     2341 actcgtgacg gcggtgggcg ttgccggctc cgagacgctc gcgctcgaca tcgcgcgagc
     2401 actgccgagc gcgcgccttt ccgagctcgg gcgcatgcag cggccggcgt tcgacggtcc
     2461 ggcggatcga cgcgcggccc taccgctcgt cccgtgaaga cgccgccctc actgcccgca
     2521 gtcgaagacg cccagcgcgt caccgtgtcc ggtgagcaac gcaaagtacg ctgacgtgtc
     2581 ggagggatgc gagacgtgtc caggcgcgtt cgacgagtag tcggtgcaat tgaagagagc
     2641 gggggcgttc tcggtgacgt attgcgttcc gtccgggcaa gtcatctgca gcgcgaagcc
     2701 gctgctcttc tcgacgaagg tcatgccgtg caccgagagc gtgagctcgt ccgctgccct
     2761 cgaatcgaaa cgcacgcatt cgtccccgct cgagctttgc gtgaaatacc agggcgatgt
     2821 cgagtcgagc gggaacgcca cgggtaatcc gaaatcgacg cttgctccgc tcgcataggt
     2881 gcaggcgctc ccgtcgtcgc tcaagacgcc cgtctcgtcc gagggcggga cacagctcac
     2941 ggcgtcagcg accagcctct tccagcagtt ttcgctcgta aaccaggagc agtcgagtgg
     3001 cgcgcccgaa agcgccgagt cgtcacccga gctacaggcc gcgagcggaa cgcagagcac
     3061 gagcgcgatg agtaagggtt tcacggtcga ccctgcgtgc ggttcgc
//
LOCUS       DATIML010001053         1537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4264378, whole genome shotgun sequence.
ACCESSION   DATIML010001053 DATIML010000000
VERSION     DATIML010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4264378"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1053)
                     /locus_tag="VLJ38_18175"
     CDS             complement(<1..1053)
                     /locus_tag="VLJ38_18175"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU41513.1"
                     /translation="MAVLLSARELTHAFGARPLFERVSFTLSEGDRVGLIGPNGAGKS
                     TLLKILAGTIAPDRGELSRRGGLRTAYLEQVTELPFATVREAVRARLPGGEHESEHEA
                     VVDEWLNRLELDADAPVAALSGGWQKRVALARALVGDPELLLLDEPTNHLDVESIVWL
                     ERFVGSARFATLTVTHDRLFLQRVSRRIFELDRRNPGGLLDIAGDYATYVETKAGLVA
                     AAEQRQQSLENTLRRETEWLRRGPSARSTKQVARIERAGSLADEVAELRVRNQSGKLA
                     LDFQARDDEMRPKRLIEARGIAKHYGEKRVLAALDLFIGPRTRLGLIGRNGCGKSTLL
                     RILTGREAATFGELITA"
BASE COUNT          237 a          513 c          536 g          251 t
ORIGIN      
        1 ggccgtaatg agctcgccga aagtagccgc ttcacggccc gtcaagatcc gcaggagcgt
       61 cgatttccca cagccgttgc ggccgatgag cccgaggcgc gtacgcggtc cgatgaacag
      121 atcgagcgcg gcgagtacgc gcttttcccc gtagtgcttg gcgatgccgc gcgcttcgat
      181 caagcgcttg ggacgcatct cgtcgtcgcg agcctgaaag tcgagcgcga gcttgccgct
      241 ctggttgcgc acgcggagct cggccacctc gtcggcgagt gacccggcgc gctcgatgcg
      301 tgcgacctgc ttcgtgctac gcgccgaggg gccgcgcctg agccactcgg tttcgcgccg
      361 cagcgtgttt tcgagcgact gctggcgctg ttcggctgcg gcgacgagcc cggccttggt
      421 ctcgacgtac gtcgcgtagt cgcccgctat gtcgagcaag ccgcccggat tccgacgatc
      481 gagctcgaag atgcggcgcg agacgcgctg caaaaatagc cgatcgtgcg ttacggtgag
      541 cgtcgcgaaa cgcgcgctcc cgacgaagcg ctccagccac acgatgctct cgacgtcgag
      601 gtgattggtc ggttcgtcga gcagcaagag ctccggatcg ccgacgaggg cgcgcgccag
      661 ggcgacgcgc ttctgccagc ctccggacag cgcggcgacc ggggcgtcgg cgtcgagctc
      721 gagccgattg agccattcgt cgacgaccgc ttcgtgttcg ctttcgtgtt cgccccccgg
      781 taggcgagcg cgcacggcct cccggacggt ggcgaacggc agctccgtca cttgctcgag
      841 ataggccgtc cggaggccgc cgcgccgcga aagctctccg cgatcgggtg cgatcgttcc
      901 ggccaggatc ttgagcaggg tggacttgcc ggcgccgttc ggcccgatga gcccgacgcg
      961 atctccttcg gacaacgtga agcttacgcg ctcgaacagc ggtcgtgcgc cgaaggcatg
     1021 agtgagctcg cgggcggaaa gaaggactgc caccggggct cgcgcggcgg accatgacgc
     1081 aactctggct cctcgtaaag ggtgacggcc acgagaaacg caacattcga cgcaggggag
     1141 ccctgttcga atggcggccg ctggtcgcga cggcgggaga gacgatgcaa cgcgtcgagc
     1201 gcgagctggc cggcaattgc gcgaactgcg aaggcctgtg ttgcgtgagc ttatcgttcg
     1261 agcgcgggcc cgccttcagc ttcgagaagg ccgcagacgt cccgtgccga cacctgctcg
     1321 ccagcgatcg ttgcgcggtg cacgcggggc gagcagctta cggcctcgcc ggctgcgcgg
     1381 gctacgaatg ctatggcgcg ggacaacgcg tagcgcgtga actcttcgcc ggctgctcgt
     1441 ggcggtttct acgtggtctt cgtcacacgc cggccgcccc gcagcggcgc ctgccgctcg
     1501 cgcgctgacc aagcgaactc gccgctcgcg cctcagc
//
LOCUS       DATIML010001054         3132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3688889, whole genome shotgun sequence.
ACCESSION   DATIML010001054 DATIML010000000
VERSION     DATIML010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3132
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3688889"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..>3132
                     /locus_tag="VLJ38_18180"
     CDS             238..>3132
                     /locus_tag="VLJ38_18180"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSU41514.1"
                     /translation="MVTDWLATFGAPRRRNGALLALLSLGGLGFLPQLGGPGYDYALV
                     SGLVLPGVAAVVAALEAGAERPGASVAVARGAGLGIALAALGFLVMLLHGARVGFCDP
                     SEGIWIYVLGPGFGAALGGVWGALAGLVAAHFGAAWKPWKRAALAVGLALAGPLTGIV
                     VSLARFVTSPMVFAFDPFFGVFSGPLYDTVVSVVDRLETYRAGTLATLTAVALGALIA
                     DHARERGLVPALADKPGVALLAFVAAVLSVVHCSLGPSLGHWSTVSSIAEALGAEQRG
                     RRCDVIYPRSLAARDAELFTRDCDARVPQIEAFFGTRGPEHVRVFLFSNENEKGWLMG
                     ASHTYIAKPWREEVYVQEAAYPHPVLSHELAHVIAGSFARGPFRVAGPLGGVWPDPGR
                     IEGFAVAAAPDETDELTVTEWAASMQKLGLLPPLRSVFELEFLGISASRAYTVAGAFV
                     VFLRDRYGSAALRRWYGGAALRDVFGGKDLAALERDFHDALGVVKVPERALATAKARF
                     EQPAFFARRCPRIVDRALGEGNQRLGTGDIKGAEEGFRRALALDPNNIDARFGLAGCA
                     RRRGDTDLALERYVTLGHDKTLGKPQAAHALETSADIELGRGHAVEAYRLYTQALELV
                     FDEDRRRTLEVKRLASQGTARDGVVALLIGDADWPPAWDAAAPLLQAWSDSHPTDDLT
                     PYLIGRNLLLAGRYPDAIKYLDHSLSFPPALASVRREALRLRLVAGCALGRDPSRSIL
                     LEHALYDPGLPLARRIGLRRMLERCPQEPGATVPSSVLAPAPAPDGAPPVSNDSAPTP
                     PNPKQPAEGVKACPRGMQRIPGGRFWMGSEPDEHFADDESPRYLTQLPAFCMDETEVT
                     AAAFGECVTSGGCTAPEREGFLCNYGRPERASHPMNCVTWTAADAYCKRRHGRLPSEV
                     ELEYVARGGEQYLKYPWGDDDPDGHACWKHAGTCAVKSFPAGAFGLSDVSG"
BASE COUNT          420 a         1088 c         1106 g          518 t
ORIGIN      
        1 ctcgatgaag tgccggaaga gatccgcaac gagctcacga ttcacctcgt cagccgtatc
       61 gatcaggtct tgccgctcgt cctcgccgag ccggagccga gctccgccgc gggcgacgat
      121 caagacgccg actcgcgaca agagaacgag gctcggccct aagcctcgga ctccggcgct
      181 cttttggcac ctagcgctcc cgctcagcca gcgagctctc tccgcgcgct cggcgccgtg
      241 gtcacggact ggctcgctac gtttggcgcg cccagacgcc gcaacggcgc gctcttggcg
      301 ctgctctcgc tcggcgggct cggcttcctg ccgcagctcg gcgggcccgg ttacgactac
      361 gcgctcgtga gcggcctcgt gctgcccgga gtcgcggccg tcgtggcggc gctcgaagca
      421 ggcgccgagc ggccgggcgc gagcgtcgcg gtggcgcgcg gcgccgggct cggtatcgcg
      481 ctcgcggcgc tcggtttttt ggtgatgctc ctgcacggag cgcgcgtcgg tttttgcgat
      541 ccgagcgaag ggatctggat ctacgtgctc gggcccggct tcggcgcggc gctcggcggc
      601 gtgtggggcg cgctcgctgg gctcgtcgcc gcgcatttcg gcgcggcgtg gaagccgtgg
      661 aagcgcgccg cgctcgcggt tgggctcgcg ctcgcgggac cgctcacggg catcgtcgtg
      721 agtctcgcgc gcttcgtgac gagcccgatg gttttcgcgt tcgacccgtt tttcggggtt
      781 ttctcggggc cgctttacga cacggtcgtc agcgtcgtcg atcggctcga gacgtaccgc
      841 gccgggacgc tcgccacgtt gacggcggtg gcgctcggcg cgctcatcgc cgatcacgcg
      901 cgcgaacgcg gcctcgtccc ggcgctcgcc gacaagccgg gcgtcgcgct gctcgcgttc
      961 gtcgcggccg tcctgagcgt cgtgcattgt tcgctcggtc cgagcttggg gcactggagc
     1021 accgtctcgt cgatcgcgga ggcgctcggc gccgagcagc gcggccgccg ctgcgacgtg
     1081 atttacccgc gctcactggc ggcgcgcgac gccgagctct tcacgcgcga ttgcgacgcg
     1141 cgcgtgccgc agatcgaagc gttcttcggc acgcgcggcc ccgagcacgt ccgcgtgttc
     1201 ttgttctcta acgaaaacga gaagggctgg ctgatggggg cttcgcacac gtacatcgcc
     1261 aagccctggc gcgaggaagt ctacgtgcag gaggcggcgt acccgcaccc ggtgctctcg
     1321 cacgagctcg cgcacgtgat cgcgggctcg tttgcgcgcg gcccgtttcg cgtcgcgggg
     1381 ccgctcggcg gtgtctggcc ggatccgggg cggatcgagg gttttgccgt cgcggccgca
     1441 cccgacgaga cggacgagct caccgtgacc gaatgggccg cctcgatgca gaagctcggt
     1501 cttttgccgc cgctgcgctc ggtgttcgag ctcgaatttc tggggatctc ggcatcacgg
     1561 gcgtacacgg tcgccggcgc gttcgtcgtg ttcttgcgcg atcgttacgg cagcgcggcc
     1621 ctgcgacgct ggtacggcgg cgcggcgctc agggacgtgt tcggcggcaa agacttggcg
     1681 gcgctcgagc gggactttca cgacgcgctc ggcgtcgtga aagtgcccga gcgcgcgctc
     1741 gcgacggcca aggcgcgctt cgagcaaccg gcgtttttcg cacggcgctg tccgcgcatc
     1801 gtcgatcgcg cgctcggcga gggcaaccag cgtctcggca cgggcgacat caagggcgcc
     1861 gaggaggggt tccggcgcgc gctcgcgctc gatcccaaca acatcgacgc tcgtttcggt
     1921 ctcgccggct gtgcgcggcg gcgcggcgac acggacctgg cgctcgaacg ttacgtcacg
     1981 ctcggccacg acaagacgct cggcaagccg caagccgcgc acgcgctcga gacgagcgcc
     2041 gacatcgagc tcggtcgcgg tcacgccgtc gaggcgtacc ggctgtatac gcaagcgctc
     2101 gagctcgtgt tcgacgaaga tcggcgccga acgctcgagg tcaagcgcct cgcgagccag
     2161 ggcacggcgc gcgacggcgt ggtcgccctg ctcatcggtg acgcggactg gccgcccgcg
     2221 tgggacgccg ccgcgccgct cttgcaagcg tggtccgaca gccatccgac cgacgatctg
     2281 acgccgtacc tgatcggtcg caatctgctg ctcgcggggc gctatcccga tgccatcaag
     2341 tacctcgatc attcactgtc gtttccgccc gcgctcgcca gcgtgcggcg cgaagcgctg
     2401 cggctccgcc tggtcgccgg ttgcgcgctc ggccgcgatc cttcgcgctc gatcctgctc
     2461 gagcacgcgc tttacgatcc ggggttgccg ctcgcacggc gtatcgggct ccggcgcatg
     2521 ctcgagcgct gcccgcaaga accgggcgcg acggtgccgt catcggtgct ggcgcccgca
     2581 ccagcgccgg acggagcgcc cccggtgtcg aacgactccg cacccacacc ccccaaccca
     2641 aaacagccgg ccgaaggcgt caaggcgtgc cctcgaggga tgcagcgcat tccgggcgga
     2701 aggttttgga tgggctccga accggacgaa cacttcgccg acgacgaaag tccgcgctac
     2761 ctgacgcagt tgccggcctt ctgcatggac gagacggagg tcaccgccgc ggctttcggc
     2821 gagtgcgtga cgagtggcgg ctgtacggct cccgagcgtg aaggcttcct ttgtaactac
     2881 ggccgacccg agcgcgcgtc gcacccgatg aattgcgtga cttggacggc cgccgacgcc
     2941 tattgcaagc gccgccacgg tcgcttaccg agcgaagtgg agctcgagta cgtcgcgcgc
     3001 ggcggtgagc agtacctgaa atacccgtgg ggcgacgatg atcccgacgg gcacgcctgc
     3061 tggaaacacg ccggtacctg cgcggtgaaa agctttccgg ccggagcatt cggcttgagc
     3121 gacgtgagcg gc
//
LOCUS       DATIML010001055         2354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5711724, whole genome shotgun sequence.
ACCESSION   DATIML010001055 DATIML010000000
VERSION     DATIML010001055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5711724"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VLJ38_18185"
     CDS             <1..190
                     /locus_tag="VLJ38_18185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41515.1"
                     /translation="ENPKCIFDFLVERVVLEFEPKAPLQVGGDSRGERSRIEVGISPT
                     PVELVDFYAPPRAEADFE"
     gene            294..608
                     /locus_tag="VLJ38_18190"
     CDS             294..608
                     /locus_tag="VLJ38_18190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41516.1"
                     /translation="MTCRLEAGSGRLLCTVSVAAPEREVIVWSDALVVTTPSALRALR
                     SRVASKSEKPEQVVLAFVIGSGAGGRIAVRSRAVACPTAPRPGACTPVTNEVGYDFEP
                     PA"
     gene            659..1414
                     /locus_tag="VLJ38_18195"
     CDS             659..1414
                     /locus_tag="VLJ38_18195"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSU41517.1"
                     /translation="MAVTRAVGYRRSMNLPGRLTRTTVGDLLGELHRAGASGVLELVE
                     ASGNRAGRAHRVFFTAGLIDDVETDRAHPPLGELLLREGALDYPQLSVLLRRLVLEPR
                     RRAGEILVAERLANEALVRAALRWQLRARLEAVFRLTDGQVRFHVLRSRERREAPQML
                     TPREFLHGRRRARNDGGSRATGMLRGLAEKRAAYRLLGLEPGADAASVRQAYRRLAAE
                     HHPDRHPGASPEKLRELVQTFTRLTAAYQLVAP"
     gene            complement(1411..2172)
                     /locus_tag="VLJ38_18200"
     CDS             complement(1411..2172)
                     /locus_tag="VLJ38_18200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chlorite dismutase family protein"
                     /protein_id="HSU41518.1"
                     /translation="MSHPHAHPEAHAPGEAPLDVRERGAQRDGQPQLLDRRLFMQLLV
                     LDCRPEPGAAASVQKLAGLLRAANVGSVIYEDVNDPFGIGLLTFTEEPADFVTKVRPA
                     VAALGAAAALRPEFTMLGRSYSSGFEQDLEFWLLKRPRETVLNEAWPWAIWYPLRRTG
                     AFARLEPRDQGGILREHGTIGKTYAAADLAHDVRLACHGLDAKDNEFVIGLIGKELHP
                     LSHVVQSMRTTRQTAEFIAQMGPFFVGRAVVRTPG"
BASE COUNT          346 a          786 c          857 g          365 t
ORIGIN      
        1 cgaaaatcca aaatgcattt tcgactttct ggtcgaacgc gtcgtgctcg agttcgagcc
       61 caaggcgccg ctacaggtcg gcggggattc gcgcggggag cgctcgcgga tcgaggtcgg
      121 catttcgccg acgccggtcg agctcgtgga tttttacgcg ccgccgcgag ccgaggcgga
      181 ctttgagtga aggcgcaccg cggacgctag gccggattat tgcgctgctc ggctgtgcgg
      241 cgcttgggac ggcgagcagc gtggccgtgg cggaagagaa cccgcgtgcc gcaatgactt
      301 gccggctcga ggcggggagc gggcggctgc tttgcaccgt gagcgtggca gcgcctgagc
      361 gagaggtgat tgtttggagt gacgcgctcg tggtgacgac accgagcgcc ctgcgagcgc
      421 tccgcagccg cgtcgcgagc aagagcgaaa agcccgagca ggtcgtgctc gcgttcgtca
      481 tcggcagcgg cgcgggaggg cgcatcgcgg tgcgctcgcg tgccgtcgcg tgtcccacgg
      541 cgccgcggcc gggtgcgtgt acgccggtca cgaacgaggt cggctacgac ttcgagccgc
      601 ccgcctgacc gcgcgcggcc gcgctgccgc cgcttctgag ccacgccagg ccgcgaattt
      661 ggccgtcacg cgcgccgtgg gttatcgccg gagcatgaac ctgccgggtc ggctcacgcg
      721 gacgacggtc ggcgatctgc tcggagaatt gcatcgagcg ggcgcgagcg gcgtgctcga
      781 gctcgtcgaa gcgtcgggca atcgggcggg ccgggcgcac cgtgtgttct tcacggcggg
      841 gctcatcgac gacgtcgaga cggaccgggc gcatccgccg ctcggagagc ttttgctgcg
      901 cgagggtgcg ctcgactacc cgcagctttc cgtgctcttg cggcggctcg tgctcgaacc
      961 gcggcggcgt gcgggtgaga tcctcgtcgc ggagcggcta gcgaacgaag cgctcgtgcg
     1021 cgcggcgctg cgctggcagc tacgagcgcg gctcgaggcc gtattccgcc tcaccgacgg
     1081 acaggtgcgc tttcacgtgc tgaggtcgcg tgagcgcagg gaggcgccgc agatgctcac
     1141 gccgcgcgag tttcttcacg gccggcgtcg cgcgaggaac gacggcggct cgcgcgcgac
     1201 cggcatgctg cgcgggctcg cagagaaacg cgcagcctac cgcctgctcg gcctcgaacc
     1261 cggcgccgac gccgcgagcg tgcgacaggc gtatcggaga ctggcggccg agcaccaccc
     1321 cgaccgccat cccggcgcgt ccccggaaaa gctacgcgag ctcgtgcaaa cgttcacgcg
     1381 actcacggcg gcctaccaac tcgtcgcgcc ttagcccggc gtgcgaacga cggcgcgccc
     1441 gacgaagaag ggccccatct gcgcgatgaa ctccgcggtc tggcgcgtcg tgcgcatcga
     1501 ctgcacgacg tgcgagagcg ggtgcagctc cttgccgatg agtccgatca cgaactcgtt
     1561 gtccttggca tcgaggccgt gacaggcgag tcgaacgtcg tgagcgagat cggccgcggc
     1621 gtacgttttg ccgatcgtgc cgtgctcgcg caggatgccg ccttgatcgc ggggttcgag
     1681 ccgcgcgaac gcgcccgtgc gacggagggg ataccaaata gcccagggcc aggcttcgtt
     1741 gagcacggtt tcgcgcgggc gcttcagtag ccagaactcg aggtcctgct cgaagcccga
     1801 gctgtaactg cggccgagca tggtgaattc cggtcgcagc gctgcggccg cgccgagcgc
     1861 cgccacggcc ggccgcacct tggtcacgaa atcggcaggt tcctccgtga aggtgagcag
     1921 gccgatgccg aacggatcgt tcacgtcctc gtaaatcacc gagcccacgt tcgctgcgcg
     1981 caaaagtccg gcgagctttt gcaccgaggc ggcggctccg ggttcgggcc ggcagtcgag
     2041 gacgagcagc tgcatgaaca ggcgtcgatc gaggagctgc ggctggccgt cgcgttgcgc
     2101 tccgcgctcg cgcacgtcga gcggggcttc ccccggggcg tgagcttcgg ggtgcgcgtg
     2161 gggatgactc atgcggtgag tctacctcca tgttaggctg ccgcggcttt gccgtccgcc
     2221 tccgttcctc cgccccgcga ccctgctccc ccgagccgag cgacgctcca ccagccggga
     2281 ctcgcgcatc cgctgccggc gggcatgcgc gaccttctac ccgccgaagc gcgagaacag
     2341 ggagagctgt cacg
//
LOCUS       DATIML010001056         1512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3972474, whole genome shotgun sequence.
ACCESSION   DATIML010001056 DATIML010000000
VERSION     DATIML010001056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3972474"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1404)
                     /locus_tag="VLJ38_18205"
     CDS             complement(<1..1404)
                     /locus_tag="VLJ38_18205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41519.1"
                     /translation="MFTRKLALICALACAASAAAPRVAKAGDPPWVRVTSANFVVYSD
                     AGEKRARAVSERLESFRALMASLFPAVVRAAHTDQVPVVAFRSDDDFKPFKPLYNGKP
                     AHAAGVFLQAAEQGMMALDVTAWEGSSHVIFHEYIHRLLARRDRPVPIWFDEGVAELY
                     SMAVARGTKAEIGRIVPGQIELLRERGLMPLDRLFAVGRDSPEYNELNKQTVFYAESW
                     LLVHYVTLDKDQTRASALTQFAERVGNGEEPATAFKAAFGIDTAAMDKELKKYLFQLT
                     VPFTSYTFEAPETAEARVEVAPPSEVEYYLGNTLAFQARFDEAKARYERAAEADKASP
                     LPYEGLCFLGVLRGDMPGVRAAYAEAVKRGSQSFYTHYYFAAASIAAGDTHSPAVRAS
                     LEKAVEINPEFADAYARLADLAIGRGDVTAARSWAERGLKIEPSNTRMLGALANADIR
                     EAKYDEARKLLTRVAAEA"
BASE COUNT          211 a          524 c          528 g          249 t
ORIGIN      
        1 ggcctcggct gcgacgcgcg tcagcagctt ccgcgcctcg tcgtacttcg cctcgcgtat
       61 gtcggcgttg gcgagcgcgc cgagcatcct cgtgttcgag ggctcgatct tcagcccgcg
      121 ctcggcccac gagcgggctg ccgtgacgtc gccccgcccg atcgcgaggt cggccagccg
      181 cgcgtacgcg tccgcgaact cggggttgat ctcgaccgcc ttctcgagcg acgcgcgcac
      241 ggccgggctg tgcgtgtcgc cggccgcgat cgacgccgcc gcgaagtagt agtgcgtgta
      301 gaagctctgc gagccgcgct tgacggcctc cgcatatgcg gcccgcactc cgggcatgtc
      361 gcccctgagt accccgagga agcagagccc ctcgtacggc agcggcgacg ccttgtctgc
      421 ctcggccgcg cgctcgtagc gcgccttcgc ctcgtcgaag cgcgcctgga acgcgagcgt
      481 gttgccgagg tagtactcga cttcggaggg cggcgcgacc tcgacgcgcg cctccgcggt
      541 ctcgggcgct tcgaacgtgt agctggtgaa cggaaccgtg agttggaaga ggtacttctt
      601 cagctccttg tccatcgccg ccgtgtcgat cccgaaggcg gccttgaacg cggtggccgg
      661 ctcctcgccg ttgccgacgc gctcggcgaa ctgcgtgaga gccgacgcgc gcgtctggtc
      721 cttgtcgagc gtgacgtagt ggacgagcag ccacgactcg gcgtagaaga cggtctgctt
      781 gttgagctcg ttgtactcgg gcgagtcgcg ccccacggcg aagagccggt cgagcggcat
      841 gagcccgcgc tcgcgcagca gctcgatctg tccgggaacg atccttccga tctccgcctt
      901 cgtgccgcgg gccacggcca tgctgtagag ctcggccacg ccctcgtcga accagatggg
      961 gacgggcctg tcgcgccgcg cgagcaggcg gtggatgtac tcgtggaaga tgacgtgcga
     1021 cgagccctcc cacgccgtca cgtcgagagc catcatcccc tgctcggcgg cctggaggaa
     1081 cacgcccgcg gcgtgcgcgg gcttgccgtt gtagagcggc ttgaacggct tgaagtcgtc
     1141 gtcgctgcgg aacgcgacga ctggcacctg gtcggtgtgc gccgcgcgca cgacggctgg
     1201 aaagagcgac gccatcagcg cgcggaagct ctcgagccgc tctgagacgg cgcgggcacg
     1261 cttctcgccg gcgtcgctgt agacgacgaa gttggcgctc gtgacgcgga cccacggcgg
     1321 gtcgccggcc ttcgccacgc gcggcgcggc ggccgacgcg gcgcacgcga gcgcgcagat
     1381 cagtgcgagt tttctcgtga acatcgggag ttctcgtcct cggaaatcac cccgtgtcct
     1441 tcaccccttc ggccggataa cctccagcga ccaaggacag agagccgccg ggccttggcg
     1501 cgagttgcag ct
//
LOCUS       DATIML010001057         1943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3399023, whole genome shotgun sequence.
ACCESSION   DATIML010001057 DATIML010000000
VERSION     DATIML010001057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3399023"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VLJ38_18210"
     CDS             complement(<1..251)
                     /locus_tag="VLJ38_18210"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HSU41520.1"
                     /translation="MHKGRLEAFTDGVIAILITIMVLELKLPNGHDWSAFAQILPRLC
                     SYVLSFVFLGIYWSNHHHLLQAADRVSGGVLWANLHLLF"
     gene            318..1463
                     /locus_tag="VLJ38_18215"
     CDS             318..1463
                     /locus_tag="VLJ38_18215"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSU41521.1"
                     /translation="MRFSTQLIHAGEPRPRIGGAVTVPIFQSSTFELSDVSGYHDVKY
                     ARLSNTPNHEVLAAKLAALENTETALVAGSGMAAISAALLAVLGAGDHLIAHDCLYGG
                     THSLITRDLAALGIETTFVDACRPETFAAALRPRTRAIYVEALTNPLLQVAEFDAVVA
                     FARAHGLVSLIDATMATPVNFRPATRGFGLVLHSASKYLNGHTDIVAGAVAGSSELVG
                     KVKRKLDHFGGSLDPHACFLLQRGLKTLELRVERQNRTSQSLAEHLSRHPAVAEVMHP
                     GLESHSGHARFKAWFSGAGGMLSFRPRGGVAAAERFVSTVELATNAPSLGGPETLVTR
                     PAITSHRGLSPEERARSGVTDDLVRVSVGLEALEDLIDDFGQALGGG"
     gene            1519..1791
                     /locus_tag="VLJ38_18220"
     CDS             1519..1791
                     /locus_tag="VLJ38_18220"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HSU41522.1"
                     /translation="MATIGIRELRQNASAYLRRVAAGEILRVADRGRPIALLRPLQER
                     RGVARLEDEGRLKPAAGDLLALGPPLRVRRSRGVSRTLALAREYER"
BASE COUNT          320 a          687 c          622 g          314 t
ORIGIN      
        1 caaaacaaga ggtgcagatt cgcccacagc acgccaccgc tgacgcgatc ggccgcttgg
       61 agcaggtgat ggtggttgct ccagtagatg ccgaggaaga cgaagctcag gacgtaggag
      121 catagtcgcg gcaggatctg cgcgaacgcg ctccagtcat ggccgttcgg caacttgagc
      181 tcgagcacca tgatcgtgat gaggatcgcg atcacgccgt cggtgaaggc ttctagtcgc
      241 cctttgtgca cgcgaggccg agcatactcg aaacgccgca ctttcattca gcgcgtgcac
      301 gtgccaagtc gaagctcatg cgcttctcca cccagctcat ccacgccgga gaaccgcggc
      361 cgcgcatcgg cggggccgtc acggtaccga tcttccagtc gtcgacgttc gaactgtcgg
      421 acgtgagcgg ctaccacgac gtgaagtacg cgcgcctcag caacacgccg aaccacgagg
      481 tgctcgccgc gaagcttgcc gcgctcgaga acaccgaaac ggcgctcgtc gccggcagcg
      541 gcatggcggc catttcggcg gcgctcctgg ccgtgctcgg cgctggcgat cacctgatcg
      601 cgcacgattg cctatacggc ggcacgcata gcctcatcac gcgcgatctc gcggcgctcg
      661 gtatcgagac cacgttcgtc gatgcctgtc gccccgagac gttcgcagcg gcgctgcggc
      721 cgcgcacgcg cgccatctac gtcgaagcgc tcacgaaccc tctcctgcaa gtcgccgaat
      781 tcgacgccgt cgtcgcgttc gcgcgcgcgc acggcctcgt ctcgctcatc gacgccacga
      841 tggcgacgcc cgtcaacttc cgcccggcga cgcgcggctt cggcctcgtg ctccacagcg
      901 cttcgaagta cctgaacggc cacaccgata tcgtcgctgg cgccgtcgcc ggctcgagcg
      961 agctcgtggg caaagtgaag cgcaagctcg accacttcgg cggctcgctc gatccacacg
     1021 cctgcttctt gctccagcgc ggcctcaaaa cgctggagct tcgcgtcgag cgccaaaatc
     1081 gcacctcgca gtcgctcgcc gaacacctga gccgccaccc cgccgtcgcc gaagtgatgc
     1141 acccaggtct cgagagccac tcgggccacg cgcgattcaa agcctggttc agcggtgcag
     1201 gcggcatgtt gagctttcgc ccacgcggcg gcgtcgcggc ggccgaacgc ttcgtctcga
     1261 ccgtcgagct cgcgaccaat gccccgagcc tcggcggccc cgagacgctg gtcacgcgcc
     1321 ccgccatcac ctctcaccgc ggcctgagcc cggaagaacg cgcgcgctca ggcgtcaccg
     1381 acgatctcgt gcgcgtctcc gtcggactcg aagcgctcga ggatttgatc gacgacttcg
     1441 gccaggcgct cggcggcggc tagcagacgc ggccgacggt cgttggcgac gggcggccac
     1501 gggtgctaca agtagcacat ggcgaccatc ggcattcgcg agctgagaca gaatgccagc
     1561 gcgtatctgc ggcgtgtcgc ggcgggagaa atcctgcgcg tcgcggaccg cggccggccg
     1621 atagcgctgc ttcgaccgct gcaagagcga cgcggtgtcg ctcgcctcga agatgaggga
     1681 cggctgaagc ccgcggcggg tgacctcctc gcgctcggcc cgccgctccg cgttcgacgc
     1741 tcgcgtggcg tgagccgcac gctcgcgctt gctcgtgagt acgagcgctg aagtggctgt
     1801 ctacctcgac gcatcggcgc tcgttaagtt agtcgtcgcc gaagcagagt cggacgctct
     1861 cctgcgcttt ctccggcggc atccgatcag ggtgacgagc gtcctctcgc acgtcgaggt
     1921 gctgcgcgcg gtgcgtcacg tcg
//
LOCUS       DATIML010001058         3805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1382336, whole genome shotgun sequence.
ACCESSION   DATIML010001058 DATIML010000000
VERSION     DATIML010001058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3805
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382336"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..1912)
                     /locus_tag="VLJ38_18225"
     CDS             complement(62..1912)
                     /locus_tag="VLJ38_18225"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSU41523.1"
                     /translation="MAALVLVTLPLAVVALDFSRRAERLLAFRGEYRLTYLAAFVESV
                     VVWGLLLYAACRQRGKGRVVASVLFAVFATFAVGGQSYFFQQYGAYLNTDVSIFATNF
                     RESVINQLFADFANYLRAKLPIFVLALAMIWLGRRALRPRRFPVSIATWLAPLVLALS
                     FAIPTQHRAVQAATPDVLYLNAIGGLLATQFGFTEQSNQLRPRLRQSLPVPPLAVAPG
                     TPKRNVLFVILESVRADATCIEHDPACRRTAATNALFPERYPFSNMRSVDSCTAISLA
                     VLWSGLDSTESRDDLHTWPLIFDYAKAAGYDTAYWTSQNMLFGNVRLWVKNLGARKFV
                     SATELDATADLDIGAPEQHLADRVNAELGDLHEPFLAVVQTSNVHYPYYVNPDGPAPF
                     QPATTSKAPEDNPHFFNYYQNAVYQEDQHLARILRHLRETEAGARTVIVYTSDHAEAF
                     REHGQMGHTFSIFDEETHVPMWIDAPPGTLTPDEVKSLRSKRDAYLFHIDLAPTILDL
                     LGVADAPGIAEYRARMHGHSLLRPELSEHAVPMTNCGGVWSCAFENWGLMQRNLKLEA
                     RSWDPGWKCYDLAADPEELHGLDLTRCHALVDAATSRYGRLPGQGVPRKD"
     gene            complement(2162..3016)
                     /locus_tag="VLJ38_18230"
     CDS             complement(2162..3016)
                     /locus_tag="VLJ38_18230"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSU41524.1"
                     /translation="MRRTGHFVVVFALVALPARAEPPSAGEQEAPPRYELEHVSPRFL
                     GLEFAASAVFATTFVLAAGAPATECSWCATNAFDEGVRDALRAAHPRTAGALSHAFST
                     GAAPALALGALVPTAFMWGRPSHALEDVVITLDATIVTFGLTNGTKRLASRARPAVRH
                     GVVADTEYADRPSEWNQSFFSADTSIAFTLVSSATTLSYLRGYRSAPWVLFAGSIIGV
                     STALLRIAADVHYATDVLTGAAIGTAVGFSMPFFLHGRAAATEPRAFTLVPLVGRREM
                     GVMVEGPL"
     gene            3073..>3805
                     /locus_tag="VLJ38_18235"
     CDS             3073..>3805
                     /locus_tag="VLJ38_18235"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41525.1"
                     /translation="MQKALCAAALYLATACATQSGVPRPSPAPDRVPPASLTSPSASN
                     AASPPVSPRYPYPPTRTSDTVDVLHGVRVADPYRWLEDGSSEEVRHWAQEQNAFTRAW
                     LDRLPEREPLRQRFRELYDIERVGPPLRRGQRYFWRQKDVGREKDALYFRLGKHGEKQ
                     VLLDPNTWSADGSVSLGGHSVSQDGKLVAYQVKKNNSDEAVLEIVEVPSGKKRPDVID
                     GAKYTSAVAWNHESTGFYYVRVPPVG"
BASE COUNT          655 a         1258 c         1321 g          571 t
ORIGIN      
        1 cctctgcacc tctcactcaa gctctcgccc tgccccttgc ccttgccctg ccccgccctc
       61 cctaatcctt cctcggcaca ccctgccccg gcagccgccc atacctactc gtcgccgcgt
      121 cgaccagcgc gtggcagcgc gtcagatcga gcccgtggag ctcttcggga tccgcggcga
      181 ggtcgtagca cttccagccc ggatcccagg agcgcgcttc gagcttcagg ttgcgctgca
      241 tcagacccca attctcgaaa gcgcagctcc aaacgccgcc gcagttcgtc atcggcacgg
      301 cgtgctcgct gagctcgggg cgcagcaggc tgtggccgtg catgcgcgcg cggtattcgg
      361 cgatgcccgg cgcgtcggcg acgccgagca gatcgaggat cgtgggcgcg agatcgatgt
      421 ggaagagata cgcgtcgcgc ttacttcgga ggcttttgac ttcgtcgggc gtgagcgtgc
      481 cgggcggcgc gtcgatccac atcggcacgt gcgtctcttc gtcgaagatg ctgaaggtgt
      541 ggcccatctg gccgtgctcg cgaaacgctt cggcgtggtc gctcgtgtaa acgatcacgg
      601 tgcgcgcgcc cgcctccgtc tcgcgcaagt gccggaggat gcgcgcgagg tgctgatcct
      661 cctgatacac cgcgttttgg tagtagttga agaagtgcgg gttgtcctcg ggcgctttgc
      721 tcgtcgtcgc gggttggaac ggcgccggac cgtcggggtt cacgtagtag gggtagtgaa
      781 cgttcgaggt ctggacgacg gcgaggaacg gctcgtgcaa gtcaccgagc tcggcgttga
      841 cgcgatcggc caggtgctgt tccggcgcac cgatgtcgag atcggccgtg gcatcgagct
      901 cggtcgcgct cacgaatttg cgagcgccca ggtttttcac ccacaagcgg acgttgccga
      961 acagcatgtt ctggctcgtc cagtaagcgg tgtcgtagcc ggcggccttg gcgtaatcga
     1021 agatgagcgg ccaggtgtgg aggtcgtcgc gcgactcggt cgaatcgagg cccgaccaga
     1081 gcacggcgag cgaaatggcc gtgcacgagt cgaccgagcg catgttgctg aacgggtagc
     1141 gctcggggaa cagcgcgttc gtcgcggccg tgcgacggca ggcgggatcg tgctcgatgc
     1201 aggtcgcgtc ggcgcgcacg ctttcgagga tcacgaagag cacgttgcgc ttcggcgtgc
     1261 cgggcgcgac ggcgagcggc ggcacgggca gcgactgtcg taaacgcggg cggagctggt
     1321 tgctctgctc ggtgaagccg aattgcgtcg cgagcagacc gccgattgcg ttcaggtaca
     1381 gcacgtcggg tgtcgcggcc tgaacggccc ggtgctgcgt cgggatcgca aagctcaggg
     1441 cgaggacgag cggagcgagc caggtcgcga tcgacacggg gaaacggcgc gggcgcagcg
     1501 cgcggcggcc gagccaaatc atagccagcg cgagcacgaa gatcggcaac ttcgcgcgca
     1561 agtaattcgc gaaatccgcg aacagttgat tgatcacgct ctcgcggaag ttcgtcgcga
     1621 agatcgagac atccgtgttc aggtaagcgc cgtactgctg gaagaagtac gactgtccgc
     1681 cgacggcgaa cgtcgcgaac acggcgaaga gcacgctcgc gacgacgcgc cctttgccgc
     1741 gctgccggca cgccgcgtac agcaagaggc cccagacgac cacgctctcc acgaacgccg
     1801 cgaggtaggt cagccggtac tcgccgcgga acgcgagcaa gcgctcggcg cgacgcgaga
     1861 aatcgagcgc cacgaccgcg agcggcaagg tgacgagcac cagcgccgcc acgtatttgc
     1921 gagcacgcga ccagcgacgg acccacggtc gcgtttcagt ccgaacgtcg ctgagctccg
     1981 gcccgacggg ctcgccagcc ggtgcggcgg acgaatgcgc ttcatggacg ccctgcacgt
     2041 tgcgagcggc agtgtagtcg gaacgtttcg gacttgtcgc tcacctgcca cagggcaaag
     2101 tgccgcgctc cacctccaag ttattagatt tattcgtttg tttgttgggg aacgccgcgc
     2161 gtcaaagtgg cccctccacc atcaccccca tttcgcggcg gccgacgagc ggcacgagcg
     2221 tgaaggcccg cggttcggtc gcggcggcgc gcccgtgcag aaagaagggc atcgaaaacc
     2281 cgacggccgt gccgatggcc gcacccgtga gcacgtccgt ggcgtagtga acgtccgccg
     2341 cgatgcgcag cagcgccgtg ctcacgccga ttatggagcc cgcgaagagc acccacggcg
     2401 cgctccggta gccgcgcagg tacgagagcg tcgtcgcgga cgacacgagc gtgaacgcga
     2461 tcgaggtatc ggcggagaag aacgattggt tccactcgga cggcctgtcc gcgtattccg
     2521 tgtcggcgac gacaccgtgc cgcaccgcgg gacgcgcgcg cgacgcgagg cgcttggtgc
     2581 cgttcgtgag cccgaacgtg acgatcgtcg cgtcgagggt aatcacgacg tcttcgagcg
     2641 catgcgacgg gcggccccac atgaacgccg tcgggacgag cgcgccgagc gcgagggcgg
     2701 gcgccgcgcc ggtcgaaaag gcgtggctga gcgcgccggc cgtccgcgga tgcgcagcgc
     2761 gcagcgcgtc gcgcacgcct tcgtcgaacg cgttggtggc gcaccagctg cactcggtcg
     2821 cgggcgctcc cgccgcgagc acgaacgtcg tcgcaaacac ggcggacgcg gcgaactcga
     2881 gccccagaaa acgcggactc acgtgctcga gctcgtaacg cggaggcgct tcttgctcgc
     2941 cggcactcgg cggttcggcc cgcgcgggca gcgcaacgag cgcgaacacg acgacgaagt
     3001 gacccgtgcg acgcaagccc ggcgacctta cgcgcggacg ctccgtgcga gaagtccgct
     3061 acgatgccgc ccatgcagaa ggctctttgc gcggcagcgc tgtatctcgc cacggcctgt
     3121 gcaacacaga gcggcgtgcc ccggccctca cccgcacccg accgcgtgcc gcccgccagc
     3181 ctgacttcac cgagcgccag taacgccgcg agcccacccg tctcgcctcg ctacccgtat
     3241 ccgccgacgc gcacgtccga cacggtggac gtactccatg gcgtgcgcgt cgccgacccc
     3301 taccgctggc tcgaagacgg ctcgtcggag gaggtgcggc attgggcgca agagcaaaac
     3361 gcgttcacgc gcgcgtggct cgaccgcttg ccggagcgcg agccgctccg ccagcgcttc
     3421 cgcgagcttt acgacatcga acgggtgggg ccgccgctgc ggcgcgggca gcgctacttc
     3481 tggcggcaga aggacgtggg acgcgagaag gacgcgctgt actttcgcct gggcaaacac
     3541 ggggagaagc aagtgctgct cgacccgaac acgtggtccg cggacggcag cgtgtcgctc
     3601 ggcggacaca gcgtgagcca ggacggaaag ctcgtcgcct accaggtcaa aaagaacaac
     3661 tccgacgaag ccgtgctcga gatcgtcgag gtgccgtcgg gcaagaagcg gcccgacgtg
     3721 atcgacgggg ccaagtacac gtccgccgtc gcctggaacc acgagagcac ggggttttac
     3781 tacgtgcggg tgcccccggt gggcg
//
LOCUS       DATIML010001059         2494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4848139, whole genome shotgun sequence.
ACCESSION   DATIML010001059 DATIML010000000
VERSION     DATIML010001059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4848139"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..656)
                     /locus_tag="VLJ38_18240"
     CDS             complement(108..656)
                     /locus_tag="VLJ38_18240"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41526.1"
                     /translation="MSSPVTTLNEAQAAAGSARDFSGVYAEFFPFVWRCLRGLGVPEP
                     SLDDAAQDVFVVVHRRLAEFAGRSSLRTWLYGIVRNVASNQRRGTARQRHTQPLDEEL
                     PSRGPGPLERAEEAEAAAFVQHFLTTVEPKRREVFILGLLEEMPIPEVAAALSIPLNT
                     AYTRLRLVRTEFQKALAAKDLR"
     gene            complement(705..1703)
                     /locus_tag="VLJ38_18245"
     CDS             complement(705..1703)
                     /locus_tag="VLJ38_18245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41527.1"
                     /translation="MVQGRRKARCSCAAAAGVALFAASTPVHAAKLAWSSPRDCERAD
                     VVEARIEELTGRDFALVEQPNFDVSVVHGGEDWQLTLVTETAEDTSRRELRGRSCGEV
                     TDAAAVAMAMAIRAAVPDAVESDPPTSAAAEPAKAAMAPPAGASSAKGEAKDKPQPSQ
                     SSKSAARLRGSVGIAAVLDTAALPGPAPGVELRGAARWGWLRAELQGAAFAPSTATLA
                     DGRSGTFSLLSGALLGCIEPSATTVGVFGCAGFELGRLAGEGHGVSNPEVGTALWSAA
                     RLELGAGLNVNSSLKLDARVGVAAPFSRKQFVLDGEPVHEPAALSVRAALGIDFLW"
     gene            complement(1849..>2494)
                     /locus_tag="VLJ38_18250"
     CDS             complement(1849..>2494)
                     /locus_tag="VLJ38_18250"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSU41528.1"
                     /translation="SDPSSTNSTSSTSHLVTQIKNATNGVTWRSYQEGLNSSTGSCPI
                     HSSGFYGAKHDPFVFFKDVAGSPPSSSNSYCVAHHKAYSSFASDLAAGDVASYTFITP
                     NLCNDMHGASGCPDSNTVRSGDTWLSKELPRLISYVNANAGVIFITWDEGSSTLKMPF
                     LAVGPGVKTNYTGTVSYTHSSLVKSIEAILALPTLSTVSSANALSDPFKAGQYP"
BASE COUNT          391 a          840 c          827 g          436 t
ORIGIN      
        1 cgcaagctga agcgccgtct cgagcgagta gcgcacgcgt tcggcgtcgg cgggcgtcgg
       61 tgccaagcca cggcgcgcgc gcgcgagcat cgagacttca acgtcgttca ccgaaggtcc
      121 ttcgcggcga gtgccttctg aaactccgtg cgcacgagcc tgagtcgcgt gtacgcggta
      181 ttgagcggga tcgacagcgc tgctgcgact tcgggaatcg gcatctcctc gagcaatccc
      241 aagatgaaca cctcgcgtcg cttgggctcg accgtggtca gaaaatgctg gacgaaggcc
      301 gcggcttcgg cctcctcggc acgctcgagc ggccccggac cgcggctcgg gagctcttcg
      361 tcgaggggct gtgtgtgccg ctggcgagcc gtgccgcgac gttggttcga cgcgacgttg
      421 cgcacgatgc cgtagagcca ggtgcgtaga ctcgagcggc cggcaaattc agcgagtcgg
      481 cgatgaacca ccacgaacac gtcctgcgcc gcatcgtcga gcgacggctc cggtacgccg
      541 agcccgcgca agcaacgcca cacgaaggga aagaattctg cgtaaactcc gctgaaatcc
      601 cgggccgaac cggcggcggc ctgcgcctcg ttgagggtgg tcacgggtga gctcacgagg
      661 cccgctcctg agtgtgtttc cgaaatgccc ggcatccgtc ccgctcacca aagaaagtcg
      721 atgccgagcg ctgcgcggac gctcagcgcc gcgggctcgt gcaccggctc cccgtcgaga
      781 acgaattgct tccggctgaa cggggcggcc acgccgactc gcgcgtcgag cttcagcgag
      841 gagttcacgt tcagtccggc gcccagctcg aggcgcgcag ccgaccagag cgcggtcccg
      901 acctcgggat tgctcacgcc gtgtccctcc cccgcaaggc gaccgagctc gaaccccgcg
      961 cacccgaaca cgccgacggt cgtcgctgac ggctcgatac agccgagcaa cgcaccgctc
     1021 aataagctga acgtgccgct gcgaccgtcg gctagcgtcg ccgtgctcgg cgcaaacgcc
     1081 gcgccttgga gttccgcgcg cagccagccc caacgcgcag cgccccggag ctcgacgccg
     1141 ggcgccggtc ccggcaatgc cgcagtatcg agcacagcgg cgattccgac gctgccgcgg
     1201 aggcgagcgg ccgacttcga gctttggctt ggctgcggct tgtctttagc ctcacctttc
     1261 gcgctgctag ccccggctgg cggggccatg gcagctttgg ccggctctgc ggctgcggag
     1321 gtcggtgggt cgctctccac ggcgtccggc accgcggcac gaatggccat ggccatcgcc
     1381 accgcggccg catcggtgac ctcgccgcag ctccgtcccc ggagctcgcg gcggctcgtg
     1441 tcctcggccg tttccgtaac gagcgtgagc tgccaatcct ctcccccgtg tacgacactc
     1501 acgtcgaagt tcggctgttc caccaacgcg aagtcgcgcc cggtgagctc ctcgatacgt
     1561 gcttcaacga cgtcggcgcg ctcgcagtcg cgcggcgagc tccaggcgag cttggccgcg
     1621 tgcactggcg ttgacgccgc aaacagcgcc acgccggctg ccgctgcgca gctgcagcgt
     1681 gccttgcgtc gcccttgcac catgccaaaa acctagtcgc tttggcacgc gctcgtcatc
     1741 gtctccgtcg tggacgcgac attcttgccc catcgtgcaa ttggcggaac ctcggcatcc
     1801 ggcgagaggc tcctggttgg gccgaaccct cccccccggt gactagcgct acgggtactg
     1861 gccggctttg aacgggtccg atagcgcgtt ggcgctcgat accgtcgaga gcgtcggcag
     1921 cgcgaggatg gcctcgatcg atttgacgag cgagctgtgc gtgtagctca ccgtgcccgt
     1981 gtagttggtc ttcacgcccg gtccgaccgc caaaaacggc attttcagcg tgctacttcc
     2041 ttcgtcccac gtgatgaaga tcacgcccgc attggcgttc acgtaactga tgaggcgggg
     2101 cagctccttg ctgagccagg tgtcgcccga gcgcaccgtg ttcgaatcgg gacagcccga
     2161 cgcgccgtgc atgtcgttgc agagattggg cgtaatgaag gtgtagctcg cgacgtcgcc
     2221 tgccgcgaga tcgctcgcga acgagctgta cgctttgtga tgggccacgc agtagctgtt
     2281 cgaggacgac ggagggctgc cggccacgtc cttgaagaaa acgaacggat cgtgcttggc
     2341 gccgtagaag ccgctgctgt ggatggggca actgccggtc gaggagttta ggccctcttg
     2401 gtagctgcgc cacgtgacgc cgttggttgc atttttgatc tgggtgacga ggtggctcgt
     2461 gctgctcgtg ctgttcgtgc tcgaggggtc gctg
//
LOCUS       DATIML010001060         5935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2533087, whole genome shotgun sequence.
ACCESSION   DATIML010001060 DATIML010000000
VERSION     DATIML010001060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5935
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2533087"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1508)
                     /locus_tag="VLJ38_18255"
     CDS             complement(<1..1508)
                     /locus_tag="VLJ38_18255"
                     /inference="COORDINATES: protein motif:HMM:NF020036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU41529.1"
                     /translation="MQPDSLAPDWPAPRPTSRAADPKRPQEGGALLGLLLRATQDGIV
                     DWDLIHNEESYNPRWAHLFGFDDYASDSPIDWRELVHPDEAEATRRLVADHLVEDWPL
                     VTTVRMRHRCGGYRTILLRGAAQRDARGQPVRMVIIFSDISDRIALEARHVALAAALP
                     DTVFRVAGGRIVDHKPGNDHPDSPFRKLAEGLELTRCLPPAVVGRLRAAFASNGANVP
                     LSPGLELVTPNGPALALHHEVRVVASGNDEWVCIVRDVTERHALADRLLQSEKLGAIG
                     QLAAGVAHEINTPMQYIGDNLHFARTAIEDLLSYNQQLKAALEAAAQGLDLSIRTALA
                     DVECKLDMAYVTAELPRAIERSLEGMGRVTTIVRALKTFAHPGQRELGEVDLGGLIES
                     AVAVATNEWKYVASIQVAVDPELPPVRCAGGELSQVLLNLLVNAAHAITDRVGNTGEK
                     GRITIEAERVGERAELRVRDTGTGIPEHARSRIFEPFFTTKEVGKGTGQGLAL"
     gene            1853..2251
                     /locus_tag="VLJ38_18260"
     CDS             1853..2251
                     /locus_tag="VLJ38_18260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HSU41530.1"
                     /translation="MPSSVDSDIRSRVEAFVEEITTMIRTSALEVVSEALGEGGTRPA
                     ARGRTRAVATVVSSGRRSKGAKRDPRMLQALTDKLGDYIKKNPGLRIEQIGKALGTPT
                     KDLALPVKKLIAGKKIATKGQKRATTYFAK"
     gene            complement(2376..3032)
                     /locus_tag="VLJ38_18265"
     CDS             complement(2376..3032)
                     /locus_tag="VLJ38_18265"
                     /inference="COORDINATES: protein motif:HMM:NF024822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HSU41531.1"
                     /translation="MLILINGPNAGSIRSIPPQFANPCDKNAAAVGGGLANTRSDGSF
                     ERKMRPRADSPSWSGWQVPAPSTTSSTIPSWVRQLVLLMDGAFRIPGTEIRVGLDPIL
                     GLLLPGAGDVLGALPSFLIIALATRQGVPPVVVLRMLLNVAIDSLVGAIPLFGDVFDV
                     TFRSNQMNLALLERHAGVRRKPRFADYLVVGVAVAVGVSLVLLPLLLVALLAKLVFTS
                     "
     gene            2986..3348
                     /locus_tag="VLJ38_18270"
     CDS             2986..3348
                     /locus_tag="VLJ38_18270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41532.1"
                     /translation="MLRIEPAFGPLMRMSMATKAERYRAEAQVENSSRKPKTRPAKTR
                     SKTPDKPHNLSARAGRKAAVSYEPSNGRPSRKSTRGSAHHLRAASPLERRAQAKQAAP
                     ETRARTSRAKSVKIRGKG"
     gene            complement(3383..3727)
                     /locus_tag="VLJ38_18275"
     CDS             complement(3383..3727)
                     /locus_tag="VLJ38_18275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41533.1"
                     /translation="MSRTSKGMVQVSGTTYRILRVGAVHEVFRLSDDGFIGSFAFSPS
                     LLLHECRVGSEILSAVARQALRSSRIDWSPPAKRAHHFEWAHAVFAKWQAPRGILLWL
                     KSGRPELSRPLA"
     gene            3951..4838
                     /locus_tag="VLJ38_18280"
     CDS             3951..4838
                     /locus_tag="VLJ38_18280"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSU41534.1"
                     /translation="MKVLVAVDFGDSSLEALRQGRALAHALDAEFATCHVLPGGSELS
                     GLFPERSLGLSNELTLDDEAARRALVEHARDRLGLELSHVFIERGSAYAEIVRRAESW
                     GADYIAVGSHGRTGLSRVVLGSVAERVVNHAHCSVLVARAVRKPGVVLVATDLSDASL
                     PALVEGAAAAQRSGARLVVASAIEWSNSFGASASALIGAAPALPPPDVQAEVRDALRA
                     TLEQALVRVGARGEARVLEGSAASEIVRAADELEAELVVVGARGRTGLLRLALGSVAE
                     RVLRSSSSSVLTVRHRASA"
     gene            complement(4867..>5935)
                     /locus_tag="VLJ38_18285"
     CDS             complement(4867..>5935)
                     /locus_tag="VLJ38_18285"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU41535.1"
                     /translation="FAAVLHARTLAMLGDLGLFEPFVWQGQSFKRIVVFSGGERRAIL
                     DVPTLGEFAEGGLTLPQNVLRNALELALQKEGVYVEYLHRLTSLRQDDSSVRAEVTRR
                     EPVSAPLSSQGRFEWRDVENLSLQADYVIGTDGRTSAVRKSLGIGLREAAPPQTFGFF
                     DVPHEPPAGQSLELVVGPEMSAMYPLHGGTTRYTFELAAPPARPLDAEKLRELRLARM
                     PWHAAGHDSVEWSGVHTFERALVERFGQGRVWLAGDAAHTTSPLGAQSINVGLREARE
                     LANGIADSIATGDRQRLSTGYDAQRELEWRKLLSFGGKPSLSPSTPSWAKQHLRDLLA
                     ALPATGDELDAHLAALGVTLI"
BASE COUNT         1009 a         1949 c         2051 g          926 t
ORIGIN      
        1 agcgccaggc cctggcccgt gcctttgccg acctccttgg tcgtgaagaa cggctcgaaa
       61 atgcgggaac gggcgtgctc tggaatgccc gtgcccgtgt cgcgcacgcg aagctcggcg
      121 cgctcgccga cgcgctccgc ctcgatggtg atgcggccct tttcgcccgt gttgcccacg
      181 cggtcggtga tggcgtgagc cgcgttgacg agcagattca agagcacctg gctgagctcg
      241 ccgcccgcgc agcgcaccgg gggtagctcg ggatcgaccg cgacctggat gctcgcgacg
      301 tatttccatt cgttggtcgc gaccgcgacg gcgctctcga tcaggccgcc gagatcgacc
      361 tcaccgagct cgcgttggcc agggtgcgcg aaggtcttga gcgcccgcac gatggtcgtg
      421 acgcgcccca tgccctcgag tgagcgctcg atggcgcgcg gaagctcggc cgtgacgtag
      481 gccatgtcga gcttgcattc gacgtccgcg agcgccgtgc gaatgctgag gtcgaggccc
      541 tgcgccgccg cctcgagcgc ggccttgagc tgctggttgt agctcaagag gtcctcgatg
      601 gccgtgcgcg cgaagtggag gttgtccccg atgtattgca tcggagtgtt gatctcgtgg
      661 gcgacgcccg cggcgagctg gccgatggcg ccgagcttct cggattgcaa gagccggtcg
      721 gcgagcgcgt gccgttcggt cacgtcccgc acgatgcaga cccactcgtc gttcccggag
      781 gcgacgacgc gcacctcgtg gtgcagcgcg agcgcgggtc cgttcggcgt cacgagctcg
      841 aggcccggcg aaagcggcac gttggcgccg ttgcttgcga aggcggcgcg cagacggccg
      901 acgaccgcgg gcggcaagca gcgagtgagc tcgagtccct cggcgagctt tctgaacggc
      961 gaatcgggat gatcgttgcc gggtttgtga tcgacgatcc gccccccggc aacgcgaaac
     1021 acggtgtccg gcagggccgc ggcgagcgcg acgtgtcgcg cctcgagcgc gatcctgtcg
     1081 ctgatgtcgg agaagatgat gaccatgcgc accggctgtc cgcgggcgtc gcgctgggcg
     1141 gctccgcgta acaaaatggt gcggtacccg ccgcagcgat gccgcatgcg gacggtcgtg
     1201 accagcggcc aatcctcgac caaatgatcg gccaccagtc ggcgagtcgc ttcggcctcg
     1261 tccgggtgca cgagctcgcg ccagtcgatc gggctatcgc tcgcgtagtc gtcgaagccg
     1321 aaaaggtgcg cccagcgcgg gttatacgat tcctcgttat ggatcaggtc ccaatcgacg
     1381 atgccgtctt gagtcgcgcg cagcaaaagc ccgagcaggg cgccgccttc ttggggacgt
     1441 ttcgggtctg ctgcacggct cgtgggccgc ggcgccggcc agtccggtgc gaggctgtcc
     1501 ggctgcacct agccgacccc gcgtgcgtga atcccgcgcg cgtgcgccgt acccaggctg
     1561 acggggcctg gtacggtcgc atgatcgctc gccagtcgtg cgcccataga ccaatgaacg
     1621 gcacgtttca cgcgaagata acgcagaaat accgctgcgg caggcgctga cgcaatttcc
     1681 ctacatgcgg gctttagcgc gccatcctga gtactgcgcc gggcggcgga agtgggcaaa
     1741 gacaacccct ttgcgttttt gctatggtcc cgcgcccgat aaagggtact gagcccgagt
     1801 tacgggtata agcctgcatc agatcgttat agtgagacac taaggagaaa gaatgccttc
     1861 atcagtcgat tccgatatcc gttcccgcgt cgaagccttc gtcgaagaga tcacgacgat
     1921 gatccgtact tcggcgctgg aagtcgttag cgaggcgctc ggggaagggg ggactcgacc
     1981 tgccgcacgt ggccggacgc gtgccgtggc gacagtggtg agctcgggcc gtcgcagcaa
     2041 gggcgccaag cgcgatccgc gcatgcttca agcgctcacc gacaagctcg gtgactacat
     2101 caagaagaat cccggcctgc gcatcgagca gatcggcaag gccctcggta cgcccaccaa
     2161 ggatctcgcc ctgccggtga agaagctcat cgccggcaag aagatcgcga ccaaaggcca
     2221 gaagcgagcg acgacgtact tcgcaaagtg aagcggacgg cgtccgcggc gcggcagaga
     2281 tcgccgcgcc cgggcgtgag gggggccgca aggtttcagt cgaggagctg cgcgccgagc
     2341 gccgagctcg gaaggacgca tggcgcaggg cagcttcagc tcgtgaagac gagcttcgcg
     2401 agcagcgcga cgagcaatag cgggaggagc acgagactca cgccgaccgc gacggcgaca
     2461 ccgacgacca gataatcggc aaagcgtggc ttccgccgca cccctgcgtg ccgctcgagc
     2521 agggccagat tcatctggtt cgaccgaaag gtcacgtcga agacatcgcc gaaaagcggg
     2581 atcgcgccta cgagcgaatc gatcgcgacg ttcaagagca tgcgtaacac caccacgggt
     2641 ggaacgccct gccgcgtcgc cagcgcgatg atgaggaagg aaggcaaggc accgagcacg
     2701 tctcccgccc cgggcaagag caggccgaga atgggatcga gccccacgcg gatctcggta
     2761 cccgggatgc gaaaagcgcc gtccatcagc agtacgagct ggcgtaccca agacggaatc
     2821 gtcgagctcg tcgtcgacgg agcgggtact tgccagccgg accacgacgg tgaatcggca
     2881 cgcggcctca tcttgcgttc aaagctgcca tcggagcgcg tgttcgccaa accgccgccc
     2941 acggccgccg catttttgtc gcacggattc gcgaactgag gcggtatgct gcggatcgag
     3001 cccgcgttcg ggccgttgat gaggatgagc atggcgacta aagcggaaag atatcgagcg
     3061 gaagcccagg ttgagaattc gtctcgcaaa ccgaagacgc gaccggcgaa aactcgctcg
     3121 aaaactccgg acaagccgca caacttgagc gcgcgggccg ggcgcaaggc ggcggtctcc
     3181 tacgagccgt cgaacggccg tccctcgcgt aaatccacgc gcggcagcgc ccatcacctg
     3241 cgtgcagcaa gcccgctcga acgacgggct caggccaaac aagcggctcc agaaacgcgc
     3301 gcccgaacct cccgcgccaa aagcgtgaag atccgcggca agggctgagc gcttccggag
     3361 cgcctcgcgt gtcgccctcg gatcaggcga gcgggcgcga tagctcgggg cggccggatt
     3421 tgagccagag caggatcccg cgcggggcct gccatttggc gaagactgcg tgggcccact
     3481 cgaagtgatg agcgcgtttg gccggcggcg accaatcgat ccgcgacgat cgcagcgcct
     3541 gacgcgccac cgcgctcaat atctctgagc ccacgcggca ctcgtggagc aacagggacg
     3601 gcgaaaacgc gaagcttccg atgaagccgt cgtcggagag tcgaaacact tcgtggacgg
     3661 cgcccacgcg gaggatgcgg tacgtcgtac cggaaacctg aaccatgccc ttactcgtcc
     3721 tggacataag tcactcctgt ggaccgcatc gagcaaggcc accgttccaa ccgccgcctc
     3781 ccgatcggct ggtgggtgct ccgctcgact aacgcttgca ccattgctag cgcttcgatg
     3841 cgactctcgc cagaggcatt cattcgaccc ccgcgtaggc agcctttcgg ttcagtggcc
     3901 ggtgtcgcgc agcgctggac cgcgggtagc cgcgccggca tgcttcacgc gtgaaagtac
     3961 tggtcgccgt cgatttcggg gattcttcgc tcgaggccct gcggcaaggg cgcgcgctcg
     4021 cccacgcact cgacgcagag tttgccactt gccacgtatt gccgggtggc agcgagttgt
     4081 ccggcctgtt ccccgagcgg agcctcggcc tgtcgaacga gctcactctg gacgacgaag
     4141 ccgcgcgccg ggcgctggtc gagcacgcgc gcgaccggct agggctcgag cttagtcatg
     4201 tattcatcga gcgcggctcg gcgtacgcgg agatcgtacg gcgcgcggag agctggggcg
     4261 ccgattacat cgccgtgggc agccatggtc ggaccggcct ttcccgcgtc gtgctcggca
     4321 gcgtggccga gcgcgtcgtc aatcacgccc actgctcggt gctcgtcgcg cgagcggtgc
     4381 gaaaacctgg tgtcgtgctc gtggcgacgg acctgtccga cgcgtcgctc cccgcgctcg
     4441 tcgaaggggc tgccgcggcg cagcgcagcg gcgcacgcct cgtggtcgcc tcggccatcg
     4501 aatggagcaa ttctttcggt gcgtcggcga gcgctctcat cggcgcggca cccgcgctac
     4561 ccccgcctga cgtgcaggcg gaggtgcgcg acgccctgcg cgcgacgctc gagcaggcgc
     4621 tcgtgcgggt cggtgcccgg ggtgaagcgc gtgtgctcga gggctcggcg gcgtccgaga
     4681 tcgtgcgcgc ggcggacgag ctcgaagcgg agctcgtcgt cgtgggtgcg cgcggacgaa
     4741 ccggactcct acggctcgcg ctaggcagcg tcgccgagcg cgtcctgcgg agctcgagct
     4801 cgtcggtgct gaccgtgcgc catcgcgcga gcgcttgagc gacgctcgaa agacgcgaag
     4861 ctcgagtcag atcagcgtca cgccgagcgc cgcgaggtga gcgtcgagct cgtcgcccgt
     4921 tgcgggcaac gcggcgagca ggtcccgcaa gtgctgcttc gcccacgacg gcgtgctcgg
     4981 gctgaggctc ggcttgccgc cgaacgacag gagctttcgc cactcgagct cgcgttgcgc
     5041 gtcgtagccc gtgctcaagc gctgtcgatc cccggtcgcg atcgagtcgg cgataccatt
     5101 ggcgagctcg cgcgcttcgc gcaggccgac gttgatgctc tgcgcgccga gcggggaggt
     5161 cgtgtgcgcg gcgtcacccg cgagccagac gcgaccctgc ccgaagcgct ccacgagcgc
     5221 gcgctcgaac gtgtgcacgc ccgaccactc gacgctgtcg tgtccggcgg cgtgccacgg
     5281 catgcgtgcg aggcggagct cgcgcagctt ctcggcgtcg agcggcctcg ccggcggtgc
     5341 ggcgagttcg aaggtgtaac gcgtggtgcc gccgtggagc gggtacatgg cgctcatttc
     5401 ggggccgacg acgagctcga ggctctgccc cgccggaggt tcgtgcggca cgtcgaaaaa
     5461 gccgaaggtt tgcggcggcg cggcttcccg caggccgatg ccgagcgatt ttcgcacggc
     5521 cgaagtgcgt ccgtccgtgc cgatcacgta gtcggcctgt agtgagagat tctcgacgtc
     5581 gcgccattcg aagcggccct gactcgagag cggcgccgag accggctcgc gtcgcgtcac
     5641 ttcggcgcgc acgctcgagt cgtcctgccg cagcgacgtc aaacggtgca ggtactcgac
     5701 gtacacgccc tccttttgga gcgcgagctc gagcgcgttc ctgagcacgt tctgcggcaa
     5761 ggtgaggccg ccttccgcga actcgcccaa ggtcggcacg tccaagatcg cgcggcgctc
     5821 gccgccggaa aacacgacga tgcgcttgaa cgactgtcct tgccacacga acggctcgaa
     5881 cagaccgagg tcgccgagca tggccagcgt ccgcgcatgg agcacggcgg cgaag
//
LOCUS       DATIML010001061         3237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5427043, whole genome shotgun sequence.
ACCESSION   DATIML010001061 DATIML010000000
VERSION     DATIML010001061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3237
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5427043"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="VLJ38_18290"
     CDS             complement(<1..510)
                     /locus_tag="VLJ38_18290"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41536.1"
                     /translation="MSSERRRVLVVDDDFAMAQTVADGLEAHGFVGVALADARAATAA
                     VEAGGYDALVTDLRIPGTDGLALLARSRAVSPESPVIVMTAFSEVATAVESIRRGAYH
                     YLTKPFQVAELSLFLQRALDESALRREAKTLRTALGSSLQGLIGESSSMRALFDLVRR
                     AADSSAPVLL"
     gene            complement(512..1879)
                     /locus_tag="VLJ38_18295"
     CDS             complement(512..1879)
                     /locus_tag="VLJ38_18295"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU41537.1"
                     /translation="MRHRFLTSRTRTLALVAIGMAAVVALESWDARHEAQKALEDLTR
                     EHALLALALAAKLDPARVIQRETDVATAVAIVCSAAAELERAGGVVVVWSFAGGGGLQ
                     TCGGRSLSVSALERAAQRGEKSLVLGRSDAMRLGLPERVAVAGLAPLPPATGLAAVAV
                     TGTAASQRDRSRRQQARTIVSLAVVTALILGFGIADLRRQRRELALERQVELEKAKQE
                     RDAELAKANRMATIAALASGFAHEIGTPLGIISGRIEQLSADAATPERRGELLAQVTQ
                     QVARVGTLVRSFLAFARGEAGLFVRAPAREVAESALRLVRHRFVTAEIELALEVGAVD
                     GAVIACEPALIEQALVNLLVNALEASSRGQRVTLRVERDAGRLSFTVTDEGAGIPESV
                     TAHVTEPFFTTKSRSGGTGLGLTIAREIVVHHRGELEIQRRNDVNGGATGTAVVVRVP
                     CQGEA"
     gene            complement(2040..>3237)
                     /locus_tag="VLJ38_18300"
     CDS             complement(2040..>3237)
                     /locus_tag="VLJ38_18300"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="porin"
                     /protein_id="HSU41538.1"
                     /translation="MPNDTVLLRRARLELTGWVGGVAYFSIAGDFAAGVPSTAGNPAA
                     QSYLNTTDDYVGLAPWGTIAMFQLGQYDAPFTLENRTSDKYFDFMERSLTVRAFGVPQ
                     NKETGGMFHGYDEKKHFFYSLGLFNGDGQNFKNVDEHFDWMGRGWVAPASFMGDGPLQ
                     AVEIGGSFWSGYRKYAGPPANQSTQGNFTFLNFAPYTTGASSEVPGTNVGLRQFHRQN
                     SYALEINAPIAHKFGVRYEAVWKTVPLTADQIGTNGAGTHLGHAELKGTSMYGEAWVW
                     ALGDDRIIGDQQGLEPLPRYKKFGVKPPQHGLMIAGRIEDLNERVTEDAATAALNLGN
                     KAVGKTHVNSYELGINYWYSKRFRATFNYVFNYFQQHGADTAPQIKALKSPAEHEIAF
                     RLAVAL"
BASE COUNT          517 a         1102 c         1080 g          538 t
ORIGIN      
        1 caacagcacc ggcgcggacg aatcggcggc gcggcgcacc agatcgaaga gcgcgcgcat
       61 gctcgacgat tctccgatca gcccttggag cgagctaccg agcgccgtgc gcaacgtctt
      121 cgcctcgcgc cgcagcgccg attcgtcgag agcccgctgc aagaacaggc tgagctcggc
      181 cacttgaaac ggcttcgtca aatagtggta ggcgcctcgg cgaatcgact ccacggccgt
      241 cgccacttca ctgaatgccg tcatgacgat cacgggcgat tcgggcgaga ccgctcgtga
      301 tcgcgcaagc aacgcgagcc cgtcggtgcc cgggatgcgc agatcggtga cgagcgcgtc
      361 gtagccaccc gcctcgacgg cggccgtcgc cgctcgggcg tccgccagcg cgacgccgac
      421 gaagccgtgc gcctctaggc cgtcggcgac cgtttgcgcc atggcaaaat cgtcgtccac
      481 taccaaaacc cgccggcgtt cggagctcat gtcacgcctc accctgacac ggcacgcgca
      541 cgacgaccgc cgtgccggta gcgccgccgt tcacgtcgtt tcgacgctgg atctcgagct
      601 cgccgcggtg atgcacgacg atctcccgcg cgatcgtgag accaaggccc gtccctccgc
      661 tccgcgactt ggtcgtgaag aatggctcgg tcacgtgcgc cgtcacgctc tccgggatac
      721 cggcaccttc gtcggtgacg gtgaagctca gtcgtcccgc gtcgcgctcg acccgcaacg
      781 tcacgcgctg tccgcgcgac gacgcctcga gcgcgttgac gagtaggttc acgagcgcct
      841 gctcgatgag cgcgggctca cacgcgatca cggcgccgtc gacggcgccc acctcgagcg
      901 cgagctcgat ctcggcggtc acgaaacgat ggcgaacgag cctgagggcg ctctcggcga
      961 cctcccgcgc gggtgcacgc acgaagagcc cggcctcgcc ccgggcgaac gcgaggaagc
     1021 ttctcaccag cgtgccgacg cgcgcgacct gctgcgtcac ttgcgcgagg agctccccgc
     1081 gtcgctcggg cgtcgcggcg tccgcgctca gctgctcgat tcggcccgag atgatgccga
     1141 gcggcgtgcc gatttcgtgc gcgaaccccg aggcgagcgc cgcgatcgtg gccatgcggt
     1201 tggctttcgc gagctcggcg tcgcgctcct gcttcgcctt ctcgagctct acctgtcgct
     1261 cgagggcgag ctcgcgccgc tggcgtcgca agtcggcgat gccgaaaccg aggatcagcg
     1321 cggtcacgac ggccaggctg acgatcgtgc gcgcttgctg tctgcggcta cggtcgcgct
     1381 ggctggcagc ggttcccgtg accgcgacgg cggcgaggcc cgtcgccggc ggcagcggcg
     1441 cgagccccgc gacggcgacg cgctcgggca acccgagcct catcgcgtcg ctccgaccga
     1501 gaaccaggct cttttctccg cgctgcgccg cacgctccag cgccgaaacg gagaggctgc
     1561 ggccgccgca ggtctggagg cctccgcctc cggcgaaact ccacacgacg acgactccgc
     1621 ccgctcgctc gagctcggcg gccgcgctgc acacgatcgc aaccgccgtc gcaacgtccg
     1681 tttcgcgctg gatcacacgc gccgggtcga gcttggccgc cagggcgagc gcgagcaggg
     1741 cgtgctcgcg cgtgagatct tcgagcgctt tttgcgcttc atgccgcgcg tcccagcttt
     1801 ccagagccac gaccgcagcc attccgatcg ccacgagcgc gagcgtgcgg gtgcgagacg
     1861 tgaggaaccg atgacgcacg gctgcggaga gcgtgactgg gaaactttcc gacgcaagtc
     1921 ggaaatcctc cgagcgctca gtgcgcattt cgcgtccctc gtgcggcaag cgagcgttca
     1981 gcaccgagct cgcacgtagc gtgcaagcct cgagccgagg tcgctcgctc gggctgggat
     2041 cagagcgcca cggcgaggcg aaacgcgatt tcgtgttcgg ctgggctctt gagggccttg
     2101 atctgcggcg ccgtgtccgc gccgtgctgc tggaagtagt tgaagacgta gttgaacgtc
     2161 gcgcggaagc gcttggagta ccaataattg ataccgagct cgtagctgtt cacgtgcgtc
     2221 ttgccgaccg ccttgttgcc gaggttcagc gcggccgtcg ccgcatcctc ggtcacgcgt
     2281 tcgttcaggt cctcgatgcg accggcgatc atcaggccat gctgaggggg cttcacgccg
     2341 aactttttgt agcgcgggag cggctcgagg ccctgctgat cgccgatgat gcgatcgtcg
     2401 ccgagcgccc agacccaagc ctcgccatac atcgacgtgc ccttgagttc cgcgtgaccg
     2461 agatgagtac ccgcaccgtt cgtgccgatt tgatcggccg tgagcggtac cgtcttccag
     2521 accgcctcgt agcggacgcc gaacttgtgg gcgatgggcg cgttgatctc gagcgcatac
     2581 gagttttggc gatgaaactg gcgaagaccc acgttcgtgc cggggacttc gctcgacgcg
     2641 ccggtcgtgt agggagcgaa gttcaggaag gtgaagttgc cttgcgtcga ttggttcgcg
     2701 ggcgggccgg cgtacttgcg gtagcccgac caaaacgagc cgccgatctc gacggcttgg
     2761 agcggcccat cgcccatgaa cgacgcgggc gcgacccagc cgcggcccat ccaatcgaag
     2821 tgctcgtcga cgttcttgaa gttttgaccg tcgccgttga aaaggccgag cgagtagaag
     2881 aagtgcttct tctcgtcgta gccgtggaac atgccgccgg tctctttgtt ctgcgggact
     2941 ccgaacgcgc gcaccgtgag tgagcgctcc atgaagtcga agtatttgtc cgaggttcgg
     3001 ttttcgagtg taaacggcgc gtcgtactgg ccgagctgga acatcgcgat cgtgccccaa
     3061 ggcgcgagcc cgacgtaatc gtcggtcgtg ttcaggtacg actgagcggc agggttgccc
     3121 gcagtcgaag gcacgcccgc cgcgaaatcg ccggcgatcg agaagtacgc cacgccgccg
     3181 acccagcccg tgagctcgag gcgcgcacgg cgcaggagca cggtgtcgtt cggcatc
//
LOCUS       DATIML010001062         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3973897, whole genome shotgun sequence.
ACCESSION   DATIML010001062 DATIML010000000
VERSION     DATIML010001062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3973897"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..939)
                     /locus_tag="VLJ38_18305"
     CDS             complement(91..939)
                     /locus_tag="VLJ38_18305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HSU41539.1"
                     /translation="MSLVTFTFLEPRIDPTAVLVEIPHAGLGLDAEAVATLAAPARAL
                     GADADLYVDELYADAPDVGAALIASRLSRYVCDLNRAENDVDPLAVEGGAGRSSPHGF
                     VWRTTTEGRPALLGPITQAEYQRRVERYHRPYHRRIAELLEERRARHGFAILLCAHSM
                     PSRGRDGHDDPGRDRADVVPGTRQRTTAAPAVIDVAERVAERFHFGLAHDEPYRGGHT
                     TVRYGRPAAGIHAIQIELNRKLYMDEPSLAKKPNEVRVVRSFCRALVQEMAGLRQVPM
                     ARAGRG"
     gene            complement(982..1905)
                     /locus_tag="VLJ38_18310"
     CDS             complement(982..1905)
                     /locus_tag="VLJ38_18310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase"
                     /protein_id="HSU41540.1"
                     /translation="MSLDRAIDAYLDHLRVERALSPNTLTAYATDLAKLARFAEERDV
                     RDPRGLDLGVVTAWLAVLAREGLGARSAARHLSALRGLSKFLLREGLIEHDPTSLTAR
                     PRLGRRLPRALGESELVRLLETPDVSTLRGLRDRAMLSVAYAAGLRVSELVRLELGDL
                     DLKRGVVQALGKGGKRRLVPLGEVALVHLEEYLSARAEDDAARAKQGKPRKVAKGDKL
                     VFRSPRGGALTRQGFWKIVGQHARAAGLRGGAHPHQLRHSFATHLLRGGADLRSVQTL
                     LGHAHVVTTEIYTHVTRDHVKDAHRRAHPRA"
BASE COUNT          306 a          653 c          779 g          306 t
ORIGIN      
        1 gccgcggaaa gtagttcaag gccggctcaa gtcaagcgag accgtccaag aggacgtcgc
       61 gccgcgctaa ataagttggc ccgacgccga ctagccgcgg ccggcgcggg ccatcgggac
      121 ttggcgcagg cccgccattt cctgcaccaa cgcgcggcag aagctgcgaa cgacgcggac
      181 ttcattgggc tttttggcga gtgacggctc gtccatatac agcttacggt ttagctctat
      241 ctggatggcg tggatgccag cggcggggcg gccgtagcgg accgtggtgt gcccgccgcg
      301 gtacggttcg tcgtgggcga ggccgaaatg gaagcgctcg gccacgcgct cggcgacgtc
      361 gatcacggcg ggggcggcgg tggtgcgctg gcgcgtgccg ggcacgacgt ccgcgcggtc
      421 gcgcccgggg tcgtcgtggc cgtcgcggcc gcggctcggc atggagtgcg cgcacaggag
      481 gatcgcaaag ccgtggcgcg cgcggcgctc ttcgaggagc tcggcgatgc ggcggtgata
      541 cgggcggtgg tagcgctcga cgcgacgctg atattcggcc tgcgtgatgg ggccgagcaa
      601 ggcggggcgg ccctcggtgg tggtgcgcca gacgaagccg tgcggcgacg aacgccccgc
      661 accgccttcg acggcgagcg ggtccacgtc gttttcggcg cggttcaaat cgcacacgta
      721 gcggctcagg cgtgacgcga tgagcgcggc gcccacgtcg ggcgcgtcgg cgtaaagctc
      781 gtccacgtag agatcggcgt ccgcgccgag cgctcgcgcc ggtgcggcga gcgtcgcgac
      841 cgcctcggca tcgagcccga gcccggcgtg cgggatctcc acgagcacgg cggtcgggtc
      901 gatgcgaggc tcgagaaacg tgaacgtcac gaggctcacg gcataccatg cgccgaggcc
      961 gaggtggttt cctggcggaa tttaagcgcg cggatgagcg cggcggtggg cgtccttcac
     1021 gtggtcgcgg gtgacgtggg tgtagatctc ggtcgtgacg acgtgggcgt gcccgagcaa
     1081 ggtctgcacg ctgcggagat ccgcgccgcc gcgcaagagg tgggtcgcga acgagtgccg
     1141 gagctggtgc gggtgagctc cgccgcgtag tccggccgcg cgcgcgtgtt gccccacgat
     1201 tttccagaag ccctggcgcg tgagcgcgcc gccgcgcggt gagcggaaga cgagcttgtc
     1261 gccttttgcg actttgcgcg gcttgccttg cttggcgcgc gccgcgtcgt cctcggcgcg
     1321 ggcactcagg tactcttcga gatgcacgag ggccacttct ccgagcggta ccaagcggcg
     1381 tttgccgccc ttgccgagcg cttggacgac gccgcgcttc aaatcgagat cgccgagctc
     1441 gagccgaacg agctcgctca cgcgcaagcc cgccgcgtac gcgacgctca gcatcgcgcg
     1501 gtcgcgcagg cctcgcagcg tgctcacgtc gggcgtttcg agcagccgca cgagctccga
     1561 ctcgccgagc gcgcgcggca ggcggcgccc gaggcggggg cgcgcggtca gcgaagtcgg
     1621 gtcgtgctcg atcagaccct cgcgcaagag gaatttggag agcccgcgca gcgccgagag
     1681 gtgccgcgcc gccgaacgcg cgccgagtcc ttcgcgagcc agcacggcga gccaggccgt
     1741 cacgacaccg agatccagcc cgcgcggatc acgcacgtcg cgttcctccg cgaaacgcgc
     1801 gagtttggcc aggtcggtcg cgtaggccgt gagggtgttc ggcgagagcg cccgttcgac
     1861 gcggagatgg tcgagatagg cgtcgatcgc gcggtcgagg gacaacaccg ggagtgtagg
     1921 ctcgagttgt gcggtcttgg aagatcagat ctcgatccgc gtgagcggcc aattgctacg
     1981 agaaaaaccg gcgaggccgg tgcttgggcc gttcccggac gcgagagacg ctggactttc
     2041 cgca
//
LOCUS       DATIML010001063         1588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1092452, whole genome shotgun sequence.
ACCESSION   DATIML010001063 DATIML010000000
VERSION     DATIML010001063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092452"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1190
                     /locus_tag="VLJ38_18315"
     CDS             <1..1190
                     /locus_tag="VLJ38_18315"
                     /inference="COORDINATES: protein motif:HMM:NF013316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3656 domain-containing protein"
                     /protein_id="HSU41541.1"
                     /translation="SLVARAESKTPLEPSRAGAGLERSLLVDKLGALGGTPFRLESLV
                     VHRLADGLHQPVSELKALRRELVTALEGALTQGQLTLPPESCLPALRRELSLGNDDAP
                     GAPVLVPLCRTSEQLEAVIASGFGNGDEVELDWMELVGLARAVERARSAGLRVTLATV
                     RVQKPGEEAFDRRLGGLAPDGVLVRHWGALMHFSGRRTRESGSGPELAVHGDFSLNVT
                     NSLTARHLLGLGLASVTASHDLNRAQLLELLRNVPRGRVALTLHHHIPTFHNSHCVYA
                     HLLSQGRDFRTCGRPCERHRLALRDYAGHEHPVVVDVGCRNTVFNALAQSAAPLVHEL
                     VELGVRRFRVEFVWERADEVERTLTAYRQLLRGELSAAAALEAAAVHERYGVTTPLRI
                     RKR"
     gene            complement(1151..1375)
                     /locus_tag="VLJ38_18320"
     CDS             complement(1151..1375)
                     /locus_tag="VLJ38_18320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41542.1"
                     /translation="MGESKRTFGGSDRAGDEHAKALTLAGGVNYRGLGLGEMAHSFAH
                     QLRGRRVESGLGRSVRLVQRFRILSGVVTP"
     gene            1376..>1588
                     /locus_tag="VLJ38_18325"
     CDS             1376..>1588
                     /locus_tag="VLJ38_18325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41543.1"
                     /translation="MEPPRDDRRAAASVTAARVVLAKCHAASARDALHGAGQLSQSAQ
                     RAPTCEACDAGWQRVSCLVRGAEASAK"
BASE COUNT          216 a          555 c          558 g          259 t
ORIGIN      
        1 cgtcgctcgt cgcacgtgca gagtcgaaga cgccgctcga gccgagccgc gccggagccg
       61 gcctcgagcg ctcgctgctc gtcgacaagc tcggcgcgct cggtggcacg ccgtttcggt
      121 tggagtcgct cgtcgtgcac cggctcgccg acgggttgca ccagccggtc tcggagctca
      181 aggcgctgcg gcgtgagctc gtgaccgcgc tcgaaggcgc gctcactcag ggtcagctga
      241 cgttgccgcc agagtcgtgc ctgccggcgc tgcgacgcga gctttcactg gggaacgacg
      301 acgcccccgg cgcgccggtg ctcgttccac tctgccgcac gagcgagcag ctcgaggcgg
      361 tcattgcgag cgggttcggc aacggtgacg aggtggagct cgattggatg gagctcgtgg
      421 gactcgcgcg cgccgtcgag cgcgctcgga gcgccggcct gcgcgtgacg ctcgccacgg
      481 ttcgcgtgca aaagcctggc gaagaagcgt tcgatcggcg actcggcggg ctcgcgcccg
      541 atggcgtgct ggttcggcac tggggcgcgc tcatgcactt ctccggccgg cggacacgcg
      601 agagcggcag tgggcccgag ctcgcggttc acggcgattt ctcgctcaac gtgaccaatt
      661 cgctcacggc gcggcacttg ctcggcttgg gtctcgcgag cgtcacggcc tcgcacgact
      721 tgaaccgcgc tcagctgctc gagcttttgc gcaacgtgcc gcgcgggcgc gtcgcgttga
      781 cgctccacca tcatattccc accttccaca actcccactg tgtttacgcg cacctcctga
      841 gtcagggtcg ggactttcgg acgtgcgggc ggccttgcga acgacaccgg ctcgcgctgc
      901 gcgactacgc gggacacgag catcccgtcg tggtggacgt cggctgccgt aacacggtct
      961 tcaacgccct ggctcagagc gcggcgccgc tcgttcacga gctcgtcgag ctcggcgtgc
     1021 gccggtttcg cgtcgagttc gtgtgggaac gcgccgacga agtcgagcgc acgctcacgg
     1081 cctatcgcca gctgctccgc ggtgagctca gcgctgccgc ggcgctcgaa gcggctgccg
     1141 tccatgagcg ttatggagtg acgacgccgc tcaggatccg aaagcgttga acgaggcgta
     1201 ccgaacgccc caggccgctc tcgactcggc ggccacgcag ctggtgagcg aagctgtgcg
     1261 ccatctcgcc gaggccgagg ccgcgatagt tcacaccgcc ggccaacgtg agcgctttcg
     1321 cgtgctcgtc gcccgcgcga tcgctgccgc cgaacgtgcg cttgctctcg cccatgtgga
     1381 gcctcctcgc gacgaccggc gagcggctgc cagtgtcacg gcggcgcgcg tcgtgctcgc
     1441 gaagtgccac gccgcgagcg ctcgcgatgc gctgcacggc gcgggtcaac tgtcgcagag
     1501 cgcgcagcgc gcgcccacgt gcgaagcgtg cgacgctggt tggcagcgag tctcttgcct
     1561 ggtccgcggc gccgaagcct cggcgaag
//
LOCUS       DATIML010001064         2927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1962945, whole genome shotgun sequence.
ACCESSION   DATIML010001064 DATIML010000000
VERSION     DATIML010001064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962945"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VLJ38_18330"
     CDS             <1..512
                     /locus_tag="VLJ38_18330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU41544.1"
                     /translation="RIKQRFEEVRDKLKKLTDLGLKVEIRRNRMVIRLPGDVLFASGQ
                     DKLRPEGVKVLDAVAEVIRKDPQLAGRYFQVAGHTDNKPLAGGRFEDNWGLSLMRARQ
                     VLVYLIGPVDPKKGGGGLDPTRLHAAGYGETDPVAKNDTDEGRQQNRRVELVLLPDVE
                     EMLDLRSLL"
     gene            682..1200
                     /locus_tag="VLJ38_18335"
     CDS             682..1200
                     /locus_tag="VLJ38_18335"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU41545.1"
                     /translation="MEAYVGGSAEAFSGLYRRISPSLMGYLLRLTRSRVRAEDLLQIT
                     FSKIHRARESYLKGAPVLPWALAIARRSFLDERRAAKSRSEELSPDGTLPEPPPVQEG
                     TPNDVSVALERALDALPESYREAIQLTKISGLSIAEAASVLGATETAVKLRVHRGYNL
                     LRKELERFARPT"
     gene            1197..1895
                     /locus_tag="VLJ38_18340"
     CDS             1197..1895
                     /locus_tag="VLJ38_18340"
                     /inference="COORDINATES: protein motif:HMM:NF018264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrsF family protein"
                     /protein_id="HSU41546.1"
                     /translation="MSERDPLDDLPWPSPPTPCERVSGAIHQKCTKNLGGRTCKSAQR
                     RTAMTLLIFAVVVGLFSWRAVTHEVPESFLRKGLLGALGWSVVLTVTLLFGLASPPGR
                     RPRRLVRVAIAALVPIVFFVYLTNTAAAHVAFGTFAQGASADHAVRCGAICFGVGALM
                     SAGLMLLWRRTDPLTPGTSGALVGLVGGMGSALGMGVACPSHEAWHLCVSHGVVVASL
                     VVLGAAAGRRLLAP"
     gene            1892..2395
                     /locus_tag="VLJ38_18345"
     CDS             1892..2395
                     /locus_tag="VLJ38_18345"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSU41547.1"
                     /translation="MKLPQRALDWLVWAAIGGAAFVMLRRHDSGPKEGSPAPGINLPL
                     VGKSDHFELDKARGKPVVLEVFASWCGTCRRAAPVLAEAYRSHSASDVAFLAVSVDDS
                     LADAERAKERWQIPYDVALDDGSVQRGYKVSLLPTVVVIGRDGVVRHTTTGVPSTKEL
                     DAWIAEP"
     gene            complement(2445..>2927)
                     /locus_tag="VLJ38_18350"
     CDS             complement(2445..>2927)
                     /locus_tag="VLJ38_18350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41548.1"
                     /translation="YHPPRETRRPRTVKLEELARDPKDAALEMQQRLMQLDFDGAAQL
                     AMGEAAAEVAKAKADCAVKAQDCAMKRKTLEKSVESTAALLERSATDATVRVTTTKPG
                     GPVTTLDKLQRQGPIWKVVSRGPDDPNFKPKPPDTPTLQLLAAPPATAIPSPPHDDDE
                     "
BASE COUNT          448 a          968 c          993 g          518 t
ORIGIN      
        1 aacgcatcaa gcagcgcttc gaggaagtgc gcgacaagct gaagaagctc accgacctcg
       61 gcctcaaggt cgagatccga cgcaatcgca tggtgatccg cttgccgggc gacgtgctct
      121 tcgcgtcggg tcaggacaaa ctccgcccgg aaggggtcaa ggtgctcgac gccgtcgccg
      181 aggtgattcg aaaggatccg cagctggccg gacgctactt ccaggtagcc ggccacacgg
      241 acaacaagcc gctcgctggt ggccgtttcg aggacaactg gggcctctcg ctcatgcgag
      301 cgcggcaggt gctcgtctat ctcatcgggc cggtcgatcc gaagaagggc ggcggcggct
      361 tggatccgac acgcctccat gccgcggggt acggcgagac ggatcccgtc gccaagaacg
      421 acacggacga gggccgccag cagaaccgcc gggtcgagct cgtcctcttg ccagacgtgg
      481 aagaaatgct cgatctccgc tcactcctct aaaaatgcga ccgcacgata cgtccgttca
      541 gaccgcgccg agaaaccccg gccatgggcc cggcgtacct agtccgtgtc cgtggccctg
      601 gctggcgtag cgctcgtgac cggtttaagg tcgccccggg tggacactcg ggccgctact
      661 gcgccatcag ccgaagaact gatggaagcc tacgtgggcg gcagcgcaga agcgttcagc
      721 ggtctctacc ggcgcatctc gccaagcctg atgggttacc tgctgcgtct cacgcgtagt
      781 cgcgtacggg cagaagacct acttcagatt acattttcca agatccaccg cgcgcgagag
      841 agctacctca aaggtgcgcc ggtgctgccc tgggcgctcg cgatcgcacg ccgctctttt
      901 ctcgacgaac gacgtgcggc aaagtcgcga tctgaggaac tatcgcccga tggcacgctg
      961 cccgagccgc ctcccgtcca ggagggaacg ccgaatgacg tgtcggtcgc gctcgaacgc
     1021 gccctcgacg cgctgcccga gtcttatcgt gaggcgattc agctgacgaa gatttccggt
     1081 ctcagcatcg cagaagcggc gtccgtgctc ggcgcgaccg aaaccgccgt gaagctccgg
     1141 gtgcatcgcg gctacaacct gctccgcaag gagctcgaac gcttcgcgag gccgacgtga
     1201 gcgagcgcga tccgctcgac gacttgccgt ggccgtctcc gccgacgccg tgcgagcgcg
     1261 tgagcggcgc catccaccaa aagtgcacga agaacctcgg cgggcggacg tgcaagagcg
     1321 cccaacgacg gacggcaatg acgctgttga tcttcgccgt cgtggtcggg ctcttttcgt
     1381 ggcgcgccgt gacgcacgag gttcccgaga gtttcctgcg aaagggcctg ctgggtgcgc
     1441 tcggctggtc cgtggtgctc accgtgacgc tgctgttcgg tctcgcgagc ccacccgggc
     1501 gccggccaag acgcctggtg cgcgtggcga tcgccgcgct cgtcccgatc gttttcttcg
     1561 tgtacctgac gaatacggct gcggcgcacg tcgccttcgg cacgttcgct cagggtgcgt
     1621 cggctgatca tgcggtccgt tgcggcgcga tttgcttcgg ggtgggagcg ctgatgtcgg
     1681 ccggattgat gctgctctgg cgccgcaccg atccgctcac gcccggtacg tcgggtgctc
     1741 tggtgggctt ggtgggaggc atgggtagcg cgcttgggat gggcgtcgcg tgtccgagcc
     1801 acgaagcgtg gcatctctgt gtttcccacg gcgtcgtcgt cgcgtcgctc gtcgtgctcg
     1861 gcgcggcggc gggccgtcgc ctgctcgcac cgtgaaactc ccacaacgcg cactcgattg
     1921 gctcgtctgg gccgccatcg gcggcgccgc gttcgtgatg ttgcgccgcc acgactccgg
     1981 tccgaaggaa ggcagcccgg cgcccggcat caatctgcca ctcgtcggca agagcgatca
     2041 cttcgagctc gataaagcgc gcggtaagcc cgtcgtgctc gaggtgttcg cgagctggtg
     2101 cggcacctgt cgccgcgccg cgccggtgct ggccgaagcg tatcgttccc attcggctag
     2161 tgacgtggcg ttcctcgccg tgagcgtcga cgactcgctc gcagacgcgg agcgcgccaa
     2221 agagcgctgg caaattccgt acgacgtcgc gctcgacgac ggcagcgtgc agcgcggcta
     2281 caaggtctcg ctgttgccga cggtcgtggt cattggccgc gacggtgtgg tgcggcatac
     2341 gacgaccggc gtcccgtcga ctaaagagct cgacgcgtgg atcgccgaac cctgacgctc
     2401 gtcgtcggca agcggccgcg ccatccgccg atgcgtgcgc ttcgctattc gtcgtcgtcg
     2461 tgcggcggcg agggaattgc cgtcgccggg ggcgcggcga ggagctgcag cgtcggcgtg
     2521 tcgggcggct tcggcttgaa attcggatcg tcggggccgc gcgagacgac cttccaaatc
     2581 ggaccttgcc gctggagctt gtcgagcgtg gtcaccggac cgccgggctt cgtcgtcgtc
     2641 acgcggacgg tcgcatccgt cgccgaacgc tcgagcagcg ccgccgtgct ctcgacggac
     2701 ttctcgagcg tcttgcgctt catggcgcag tcctgagcct tcacggcaca gtctgccttg
     2761 gctttggcaa cctcggccgc ggcctcaccc atcgcgagct gcgccgcgcc atcgaagtcg
     2821 agctgcatga ggcgctgttg catctcgagc gcagcgtcct tcgggtcgcg cgcgagctcc
     2881 tcgagcttca ccgtgcgagg gcgacgcgtt tcgcgcggcg ggtggta
//
LOCUS       DATIML010001065         3155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2534422, whole genome shotgun sequence.
ACCESSION   DATIML010001065 DATIML010000000
VERSION     DATIML010001065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3155
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2534422"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(212..1495)
                     /locus_tag="VLJ38_18355"
     CDS             complement(212..1495)
                     /locus_tag="VLJ38_18355"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSU41549.1"
                     /translation="MPASVNRREFLGALGALACTPAAGVPPNSGGAAMTGEQASLHDA
                     LAAYVGRGKYPGVVAAVVRDGREQFETLGVKSAGSNDHVERDTIFRIASMTKPVTAAA
                     TLLLVDDGKLRLDEPVDRLLPELAARRVLRRLESPLDDTVPASRPISVRDLLTFRLGF
                     GLLLAPPGTYPIQHAMDELALGQGMPAPATPPAPDEWLRRLGTLPLMHQPGERWLYNT
                     GADVLGVLVARAAGQPFDAFLRERLFEPLGMHDTDFSVPPSKRSRFVPSYLVDPKTGA
                     LTLYDTVDGQWSLRPAFPSGAGGLVSTAPDFLRFAAMLAAGGLAGEKRILREASVKQM
                     TADALTPQNKAFGALVPGYFDRHGWGFCLAVVTARDELGRSRGSYGWDGGLGSSWYND
                     PVTRTTGVLLTQRAWTEPAPPPLFVDFWRAVERKI"
     gene            complement(1531..2613)
                     /locus_tag="VLJ38_18360"
     CDS             complement(1531..2613)
                     /locus_tag="VLJ38_18360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41550.1"
                     /translation="MKRRSGLARQLLARAASGLDRAITLAMRVTIPELEVDPTLGSGH
                     EARVEALQGILARYASLDLSGFYPEPRVIEPTLRDKRPFSAALSRRDVVWESVGGTFL
                     PELEHAYRQTAQNHLAHARLITRAEPRPIALLVHGYMMGQLRVDERVWPIQVLDELGF
                     DSALVLLPFHGRRAHPERTGVPEFPGRDPRFAAEGFRQAVTDLRELAGFLRRRGHPSV
                     GMLGMSLGAYTAALTTTVDASFDFLVPIVPLASIADFAREQGELPDAPEPRAVQHALL
                     ERAYAHVSPVHREPLIARERVLVIGAKADRITPFSHARRLAAHFHAPLAAWHGGHLWQ
                     LGRGEAFERVAELLRALPSLEAGKGA"
     gene            complement(2610..>3155)
                     /locus_tag="VLJ38_18365"
     CDS             complement(2610..>3155)
                     /locus_tag="VLJ38_18365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41551.1"
                     /translation="GLAAEPYRGIAVACPYTPNVFRQPSTPLALDRYAAWIADGLLPE
                     LRKILPLPEGPSAIGVDGVSLGGYVSLEVFLRRPEAFGAVGALQAAIGENLTDYYATR
                     FKAALDRVGPRPLRIATTAWDKERPTSERLVARLRAHDVPVTLDNSPGGHDQGFLREA
                     GSLELLYYYDRTLPRAPRKPG"
BASE COUNT          520 a         1061 c         1127 g          447 t
ORIGIN      
        1 tcgcgcaaga tcgcggacac gccgtgagcg gccagcacat cgacgtcttc acgggccacc
       61 cgtccatcac gaccctgtgg aaccgccgcg tgccgagcaa cgccggcgtc acggtcgtgc
      121 tcgacagccc acgctgcgcg cgcgtcgcgc cgtaagccca gcgcgccgtc agcgcggacg
      181 cgagctgagc ggtctcggcc aggcgctcgt ctcagatctt gcgctcgacc gcacgccaaa
      241 agtcgacgaa cagcggcggg ggcgcgggtt ccgtccaagc gcgttgcgtg agcagcacgc
      301 cggtcgtcct cgtcaccgga tcgttgtacc aggacgaacc gagcccgcca tcccagccgt
      361 agctgccgcg cgaacggccg agctcgtctc gcgcggtgac gaccgcgagg caaaaacccc
      421 agccgtgccg gtcgaagtaa ccgggcacga gcgcaccgaa ggccttgttt tgcggggtga
      481 gcgcgtcggc cgtcatctgc ttcaccgacg cttcgcgcag gatccgcttt tcacccgcca
      541 ggccgcccgc cgcgagcatg gcggcgaagc gcaagaaatc gggcgccgtc gagacgagac
      601 cccccgcacc ggacggaaac gccggtcgca gactccactg cccgtcgacc gtatcgtaga
      661 gcgtgagcgc gcccgttttc ggatcgacga ggtagctcgg gacgaagcgg ctgcgtttgc
      721 tcggtggcac gctgaagtcg gtgtcgtgca tgccgagcgg ctcgaacagc cgttcgcgca
      781 ggaacgcgtc gaacggttgc cccgcggcgc gcgcgacgag cacgccgagc acgtccgcgc
      841 ccgtgttgta cagccagcgt tcgccgggct gatgcatgag cggcaacgtg ccgagacggc
      901 gcagccattc gtcgggagca ggcggggtag caggggcggg catgccttgt ccgagcgcga
      961 gctcgtccat ggcgtgctgg atcgggtagg tgccgggagg cgcgagcaac aagccgaaac
     1021 cgagacgaaa ggtgagtaaa tcacgcacgc tgatggggcg cgaggcgggc acggtgtcgt
     1081 cgagcggcga ttcgagccgg cgcagcacgc gacgcgcggc gagctccggc aagagccggt
     1141 cgacgggttc gtccagacgg agcttgccgt catcgacgag caagagcgtc gcggcggccg
     1201 tcacgggttt cgtcatggag gcgatgcgaa aaatcgtgtc gcgctcgacg tgatcgttgc
     1261 tgccggcgct cttcacgccg agcgtttcga attgttcgcg gccgtctcgc acgacggcgg
     1321 ccacgacgcc cgggtatttg ccgcgaccga cgtacgctgc gagcgcatcg tgcagcgacg
     1381 cttgctcgcc ggtcatcgct gctccacccg agttcggcgg cacgcccgca gccggcgtgc
     1441 acgcgagcgc accgagcgcg cccaagaact cccggcggtt gaccgacgca ggcatcccgc
     1501 ggttctaccc gaaatcccgg ccctcgttcg tcatgcgccc tttcccgctt cgaggctcgg
     1561 caacgcacgc aagagctcgg cgacacgctc gaacgcttcc ccacggccga gttgccagag
     1621 gtgaccgccg tgccaggccg cgagcggcgc gtgaaagtgc gccgcaagcc gccgcgcgtg
     1681 cgaaaacggc gtgatgcgat cggccttcgc gccgatgacg agcacgcgtt cgcgcgcaat
     1741 gagcggctcg cggtgcaccg gactcacgtg cgcgtaggcc cgctcgagca gcgcgtgctg
     1801 gaccgcgcgc ggctcgggcg cgtccggcaa ctcaccttgc tcgcgcgcga agtcggcgat
     1861 ggacgcgagc ggtacgatgg ggaccaagaa gtcgaagctc gcgtcgacgg tcgtcgtgag
     1921 cgcggccgtg taagcaccga gactcatgcc gagcatgccc accgacgggt gtcctcgccg
     1981 ccgcagaaac cccgcgagct cgcgcaagtc cgttacggcc tggcgaaaac cttcagcggc
     2041 gaagcgcgga tcgcggccgg gaaattcggg gacacccgtg cgttcggggt gcgcacgccg
     2101 gccgtggaac ggcagcagca cgagcgcgct gtcgaagccg agctcgtcga gcacctggat
     2161 gggccaaacg cgctcatcga cgcggagttg tcccatcatg taaccgtgca ccaggagcgc
     2221 gatcgggcgc ggctcggcgc gtgtgatgag gcgggcgtgc gcgaggtgat tttgggccgt
     2281 ctgtcgatac gcgtgctcga gctccggcaa gaatgtgccc cccacgctct cccacacgac
     2341 gtcacgacgc gagagggccg cgctgaaagg acgcttgtcg cgcagcgtcg gttcgatgac
     2401 gcggggctcg ggataaaatc cggaaaggtc gaggctggcg tagcgcgcga ggatcccctg
     2461 cagcgcttcg acgcgcgctt cgtggcccga gccgagcgtt gggtcgacct cgagctcggg
     2521 gatcgtgacg cgcatggcga gcgtgatcgc gcggtcgagc cccgaagccg cgcgagcgag
     2581 cagttgtcga gcgaggccgg accgccgttt catcctggct ttctgggcgc gcgcggcagg
     2641 gtgcggtcgt agtagtagag gagctcgagg ctgcccgctt cgcgcaagaa gccctggtcg
     2701 tggccgcccg gcgagttgtc gagggttacg ggcacgtcgt gagcgcgcag gcgcgcaacg
     2761 aggcgttcgc tcgtcggccg ctccttgtcc caagccgtgg tcgcgatgcg gagcgggcgc
     2821 gggcccacgc gatcgagcgc cgccttgaag cgagtcgcgt aatagtcggt gagattttcc
     2881 ccgatcgccg cttgcagcgc gcccacggcg ccgaacgcct ccgggcgccg cagaaatacc
     2941 tcgagcgaaa catagccgcc gagggacacg ccatcgacac cgatcgcgct cgggccttcg
     3001 gggagcggca aaatcttcct gagctcgggc aagagtccgt ccgcgatcca cgcggcgtag
     3061 cgatcgagcg ccaggggcgt ggacggttgg cgaaagacgt tcggcgtgta gggacatgca
     3121 accgcgatgc cgcgatacgg ctccgccgcg agccc
//
LOCUS       DATIML010001066         2915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1962996, whole genome shotgun sequence.
ACCESSION   DATIML010001066 DATIML010000000
VERSION     DATIML010001066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2915
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962996"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1293
                     /gene="argS"
                     /locus_tag="VLJ38_18370"
     CDS             <1..1293
                     /gene="argS"
                     /locus_tag="VLJ38_18370"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HSU41552.1"
                     /translation="GQRVIRQNHVGDWGTPFGMLLEHLADVGADRAASELSMGSLNQF
                     YQAARQKFDGDPAFAERARRRVVLLQSGDAETLAQWKTFVNASLRYFSTLYGRLGVLL
                     EDGDVRGESFYNSMLPDVAEELERQGIARIDAGALCVFLDEFKGRDGTLVPLIVRKQD
                     GGFGYAATDLAATRFRTQELGATRLLYVTGSPQQQHFAMVFATAKRAGFLPPHARAEH
                     VMFGSILGPDKKMFKTRSGENVRLAELLDEAVERAERAVREKNPELDADEIARVAEAV
                     GIGALKYADLSSDRIRDYVFDWDRMLAFEGNTGPYLQYAHARICSISRKAAGAGITAG
                     PDTPLLLATEPERRLAVELLMLEPVLASVERTLEPHKLCGYLYELATTFTSFYESSPV
                     LRADDAATRASRLLLCQATRSVLALGLGLLGMAAPERM"
     gene            complement(1978..>2915)
                     /locus_tag="VLJ38_18375"
     CDS             complement(1978..>2915)
                     /locus_tag="VLJ38_18375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41553.1"
                     /translation="NRCCVRAGLESGRAHVMGPRRPGPGFGALGLLVFMAATASACGS
                     DGDTRMLPPDQVAMNPAVAPVFMTDELTIYEVKKGLQFPILAPKNGMPAASGGYEPYG
                     REPWITLKDVRVQISWTLTNLDDQPHNVELVVDPWTEFGRYWPGLTLVDPEEGKYQPN
                     LSALDQYLPLARSSAGDKSRLHGTFTYDDLDEVARDFATAMDLIKFPPTAYPGGQPVD
                     PADQAGLLPTYVNHAFDFENHSNKDPLVKQWVPATAAALTGIDFGLRTYEQATIGLEI
                     VVEVTDQGTGKVQDEDSNEALLAPTTTIITVGTAM"
BASE COUNT          493 a          974 c          948 g          500 t
ORIGIN      
        1 ggccagcgcg tgatccgcca aaatcacgtc ggcgattggg gcacgccgtt cggcatgctg
       61 ctcgagcacc tggccgacgt gggcgccgat cgcgccgcca gcgagctctc gatgggctcg
      121 ctcaatcaat tctatcaagc cgcgcgccag aagttcgacg gcgacccggc gttcgccgag
      181 cgcgcgcggc ggcgggtcgt cttgctgcag agcggcgacg ccgaaacgct cgcgcagtgg
      241 aagaccttcg tgaacgcgtc gctgcgctac ttttcgacgc tgtacggccg gctcggtgtg
      301 ctcttggagg acggcgacgt gcgcggcgag agtttttaca actccatgct gcccgacgtc
      361 gccgaggagc tcgagcggca gggcatcgcg cgcatcgacg cgggcgcttt gtgcgtcttt
      421 ttggacgaat tcaagggccg cgacgggacg ctcgtgccgc tcatcgtgcg caagcaggac
      481 ggcggattcg gctacgccgc gacggatctc gcggcgactc gctttcgcac gcaagagctc
      541 ggcgcgacgc gcttgctcta cgtgacggga tcgccgcagc agcagcactt cgcgatggtg
      601 ttcgccacgg cgaagcgcgc cggcttcttg ccgccacacg cgcgcgccga gcacgtgatg
      661 ttcggctcga tcctcggccc cgacaagaag atgttcaaga cgcggtccgg cgaaaacgtg
      721 cggctcgccg agctgctcga cgaagccgta gagcgcgccg agcgcgccgt gcgcgagaag
      781 aaccccgagc tcgacgccga cgaaatcgcg cgcgtcgccg aagccgtcgg cattggcgcc
      841 ctcaagtacg ccgatctctc gagcgatcgc atcagagact acgtcttcga ttgggatcgc
      901 atgctcgcct tcgagggcaa caccgggccg tacctccaat acgcgcacgc ccgcatctgc
      961 tccatctcgc gcaaagccgc gggcgcgggc atcaccgcgg gccccgacac acccctgctg
     1021 ctcgcgaccg aacccgaacg ccgactcgcc gtcgagctgc tcatgctcga acccgtgctc
     1081 gcgagcgtcg aacgcacgct cgaaccccac aaactctgcg gctacctcta cgagctcgcg
     1141 accaccttca cgagcttcta cgaaagctcc cccgtcctcc gcgccgacga cgccgccacg
     1201 cgcgcctcgc gtctcttgct ctgccaagcg acgcgctccg tgctcgcgct cggcctcggg
     1261 ctactcggca tggcagcgcc cgagcggatg taacgctggc tccgccgcga gcgcgccagg
     1321 cgccacacgc cgggcaaggt agccggctgc tctccttcac ggtaggatga aagtatgaca
     1381 gccgcaaaag tcgccgttac gattccggcg gatgtgctgc agctcgctcg cgagcaaatc
     1441 aaggcaggcc gcgccaaatc gctgagctcg ctcgtcagtg aagccctcgg cgagaaagtg
     1501 cgccgagacc aattactcga gattctcgac gaaatggacg cgcgcttggg aaagcctaac
     1561 aaggaggccg aacgatgggc aaagcgcgtc ctcgggcgat agttctcgac gcaggcgctc
     1621 tcatcgcgtt cgagcgtgag agtccacgca tgagagcgtt gtgtcggcag gcgcttcggt
     1681 caggcgttcg tctggtcgtg ccaacaccgg tcattgcgca agtctttagg gatcggatgc
     1741 gccaagtgcc gttgcgcgcg ctactgaacg ggccgaccac gagaaccccg agcttcgacc
     1801 ggcctttggc cgaggccacc ggcacgcttt gcggcagaac gcgcacttcg gacgtcgttg
     1861 acgcctccgt ggttctggtc gcgcggcagg aacgcgcccc cgtcgtgaca agcgatccgg
     1921 acgacctagc ccgcctcgat ccagatctga cgctcgaacg aatctagggg aacgcgccta
     1981 catcgccgtg cccacggtga tgatcgtcgt cgtgggcgcg agcagcgctt cgttcgagtc
     2041 ttcgtcctgc actttgcccg tgccctggtc ggtcacttca accacgattt cgagcccgat
     2101 cgtcgcttgt tcgtaagtgc gaaggccgaa gtcgatgccc gtgagagcgg cagcggtcgc
     2161 cgggacccat tgcttcacga gcgggtcttt gttcgaatgg ttttcgaaat cgaaggcgtg
     2221 gttcacgtac gtcgggagaa gtccggcttg gtcggcgggg tcgaccggtt gtccgccggg
     2281 gtacgccgtg ggcgggaatt tgatgaggtc catcgccgtc gcaaagtcac gcgcgacttc
     2341 atcgaggtcg tcgtaggtga acgtgccgtg caggcgtgac ttgtcgccgg cgctcgagcg
     2401 cgcgagcggg aggtactggt cgagcgcgga gaggttcggc tggtatttgc cctcctccgg
     2461 atcgacgagc gtgagtcccg gccaatagcg tccgaattcc gtccacgggt cgacgactag
     2521 ctcgacgttg tgcggctgat cgtcgaggtt cgtgagcgtc cacgagatct gcacgcgcac
     2581 gtccttgagc gtgatccacg gttcgcggcc gtaaggctcg tagccgccgg acgctgcggg
     2641 catgccgttc ttgggcgcga ggatcggaaa ttggaggcct tttttgacct cgtaaatcgt
     2701 cagctcgtcc gtcatgaaca cgggcgccac ggccggattc atcgcgactt gatcgggcgg
     2761 caacatgcgc gtgtcgccgt cgctgccgca cgcgctcgcc gtcgccgcca tgaaaacgag
     2821 caaaccgagg gctccgaacc ccggcccggg gcggcgcggc cccatcacgt gagcccgccc
     2881 cgactcgagc ccagcacgaa cgcagcatcg attca
//
LOCUS       DATIML010001067         3393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5427875, whole genome shotgun sequence.
ACCESSION   DATIML010001067 DATIML010000000
VERSION     DATIML010001067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3393
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5427875"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..175)
                     /locus_tag="VLJ38_18380"
     CDS             complement(<1..175)
                     /locus_tag="VLJ38_18380"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HSU41554.1"
                     /translation="MTIGRLAKAAGLNVETIRYYQRRGLIDEPRKPFGGHRRYPADAV
                     RRLAFIRHAQQLGF"
     gene            complement(319..1365)
                     /locus_tag="VLJ38_18385"
     CDS             complement(319..1365)
                     /locus_tag="VLJ38_18385"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSU41555.1"
                     /translation="MDQFKETLYDVMGLQRDAGPHDINRAWNRYRAQMRNESTPPDPR
                     RDALMRHAYETLSDPYKREAYDAALRRESPVLRATKRSPRAVATAGVLVAAALGAAAY
                     ALHFSHQPPAKAALPVKPIEEIRDMATRAVGRVQAVDLGGKEATLGVAFAIEPGVMAA
                     ACTGLSPDHEALVLSPPRRWPARVTQFDPRGLCRLEVHGGAAFPLVLTGVVPPQKADV
                     YMVDVGPQGTASVRAATVTRVDGGAGGTIVTSLPLTEASLGSPLLDADGRVVAVAVPH
                     PTAGAAYLLTPRKWLPFEEAPQVSPPRVREGDAPVNPDAAPHGARAPVPISPERQQKL
                     NDTFRPPSKVPDEL"
     gene            complement(1402..3195)
                     /locus_tag="VLJ38_18390"
     CDS             complement(1402..3195)
                     /locus_tag="VLJ38_18390"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU41556.1"
                     /translation="MPLLQLSSVSLAYGHVPLLDHADLVIEPGERVGLIGRNGAGKSS
                     LLRMAAGEVVPDDGRVWRAPELRLAAVAQEPEFSESLTVFEAASAPLRSHVAAEDAWS
                     VTHRVEAQLARFGLERDARLSSLSGGQKKRTALAAALAAEPALLLLDEPTNHLDISAI
                     EWLEGVLANFAGSVLFVTHDRRFLDRVATRIVELDRGRLLSYPGNFSAYETRKAEQLA
                     VEAVENRKFDKLLAAEESWIRKGVEARRTRNEGRVRRLESLRLERAARRDRSGQVSLA
                     LADAERSGRLVAELEGVGKRYGERVVVRDFSTRVMRGDKIGFIGPNGSGKTTLLKLIL
                     GELAPDEGTVRMGARVAVAYFDQFRTALDEEATLADTISPGSDFVEVGGGRKHVISYL
                     GDFLFPPERARSPVRSLSGGERNRLLLARLFSRPANVLVLDEPTNDLDIDTLELLEQM
                     LQEYDGTVLLVSHDRAFLDAVVTQTIASEGDGRWKEYAGGYDDWLRASRAGSSEAARK
                     PPEAESAARERPRRAQKLSYNETRELEGLPARLEAVEAEQKALAAKLADPAIYQDRSV
                     DFKALNERHDALDAELLALLARWEALEAKRA"
BASE COUNT          501 a         1163 c         1202 g          527 t
ORIGIN      
        1 agaacccgag ctgctgcgcg tggcggatga acgcgaggcg acggacggcg tcggcggggt
       61 agcgccggtg gccgccgaaa ggcttgcggg gctcgtcgat gagcccacgc cgctggtaat
      121 accggatcgt ctcgacgttg aggccggccg ctttcgcgag ccggccgatc gtcatgccgg
      181 actgcaaatc ccctgctcgc accacgaagc cccttgaagt cgcgccgtag ggtacaggcc
      241 gtacctgcgt acgatgtcca acatggatac cgaaaagccc atcattgtgc gcgcatgcga
      301 ggcgaaccgc ccgaggcgct acaactcgtc cgggactttc gagggcgggc ggaaggtgtc
      361 gttgagcttc tgctggcgct cgggagaaat gggcacgggc gctcgggcgc cgtgcggcgc
      421 cgcgtccggg ttcaccggcg cgtcgccctc gcgcaccctg ggcggcgaca cctgcggggc
      481 ctcctcgaag ggcaaccact tcctcggcgt gagcaggtag gcggcgcctg ccgtcggatg
      541 cggcacggcg acggcgacca cgcgaccgtc ggcgtcgagg agcggcgagc cgaggctcgc
      601 ctcggtgagc ggcaggctcg tcacgatcgt cccgcccgcg cctccatcga cgcgcgtgac
      661 cgtggcggcc cgcaccgaag cggtcccctg gggaccgaca tcgaccatgt agacgtccgc
      721 cttttgcggc ggcacgacgc ccgtgagcac caggggaaac gccgcgcccc cgtgcacctc
      781 gagacggcac aggcctcgcg ggtcgaattg cgtgacgcgg gcgggccaac gccgcggtgg
      841 ggaaagcacg agcgcctcgt ggtcgggtga caatcccgtg cacgccgccg ccatcacgcc
      901 gggctcgatc gcgaacgcga cgccgagcgt cgcttccttg cccccgagat cgacggcctg
      961 cacacgaccc accgcccgtg tcgccatgtc gcggatctcc tcgatcggct tcacggggag
     1021 cgccgccttc gcgggcggct gatggctgaa gtgcagcgcg taggccgcgg cgcccagcgc
     1081 ggccgccacg agcacgcctg ccgtggccac ggcgcgtgga gagcgcttcg tcgcccgcaa
     1141 caccggcgat tcgcgtcgca gcgccgcgtc atacgcttcg cgcttgtagg gatcggaaag
     1201 cgtctcgtag gcgtgccgca tgagggcgtc gcggcgcgga tcgggcggcg tgctctcgtt
     1261 gcgcatctgc gcgcggtagc ggttccaggc gcggttgatg tcgtggggcc ccgcgtcgcg
     1321 ctgcaagccc atcacgtcgt acagcgtttc cttgaattgg tccatggtgc gagaaatcgt
     1381 cggtcttgaa tgcggtaagg gtcaggcacg cttcgcttcg agcgcctccc agcgggcgag
     1441 gagcgcgagg agctccgcgt cgagcgcgtc gtggcgttcg ttgagcgcct tgaagtcgac
     1501 gctgcggtcc tggtagatcg cgggatcggc gagcttcgcg gcgagcgcct tctgctccgc
     1561 ctcgacggcc tccagccgcg ccggcaggcc ctccagctcg cgcgtctcgt tgtagctcag
     1621 cttctgcgca cggcgcgggc gctcgcgagc ggccgattcg gcttcgggcg gcttgcgggc
     1681 ggcctcggag ctgcccgcgc gcgaggcgcg cagccaatcg tcgtagccgc cggcatattc
     1741 cttccagcgc ccgtcgcctt ccgacgcgat ggtctgcgtc accacggcat cgaggaacgc
     1801 gcggtcgtgg ctcacgagca gcacggtgcc gtcgtattcc tggagcatct gctcgagcag
     1861 ctcgagcgtg tcgatatcga ggtcgttggt cggctcgtcc agcaccagca cgttggccgg
     1921 gcggctgaag agccgcgcga gcagcaggcg gttgcgctcg ccaccggaga gcgaacgcac
     1981 gggtgagcgc gcccgctcgg gcggaaagag aaagtcgccg aggtagctga tgacgtgctt
     2041 tcggccgccg cccacctcga cgaaatcgct gcccggcgag atcgtgtcgg cgagcgtcgc
     2101 ctcctcgtcg agcgcggtgc ggaactggtc gaaatacgcg accgcgacgc gggcgcccat
     2161 gcggacggtg ccttcgtcgg gcgcgagctc gccgaggatc agcttgagca acgtcgtctt
     2221 gccgctgccg ttgggcccga tgaagccgat cttgtcgccg cgcatgacgc gcgtggagaa
     2281 gtcgcgcacc acgacgcgct ccccgtagcg cttgcccacg ccctcgagct ccgccacgag
     2341 gcgcccggag cgttcggcgt cggccagcgc gaggctcacc tggcccgaac ggtcgcgccg
     2401 cgccgcgcgc tcgaggcgca gggactccag ccggcgcacg cggccttcat tgcgcgtccg
     2461 gcgtgcctcg acgcccttgc ggatccagga ctcctcggcg gcgagcaact tgtcgaattt
     2521 ccggttctcg accgcttcca ccgcgagctg ctcggccttg cgcgtctcgt aggccgagaa
     2581 gtttcccggg tacgagagga ggcgcccccg gtcgagctcg acgatgcggg tggcgacgcg
     2641 gtcgaggaag cgccggtcgt gcgtcacgaa gaggacgctc cccgcgaagt tggccagcac
     2701 gccttccagc cactcgattg ccgaaatatc gaggtggttc gtcggctcgt cgaggagcag
     2761 cagcgcgggc tccgccgcga gcgccgcggc gagggccgtc cgctttttct ggccgccgga
     2821 aagcgacgag agccgcgcgt cgcgttcgag cccgaagcgc gcgagctgcg cctcgacgcg
     2881 gtgcgtgacg ctccacgcgt cctcggcggc cacgtgcgag cgcagcggcg cgctcgcggc
     2941 ctcgaacacc gtgagcgact cggaaaattc cggttcctgc gcgaccgcgg cgaggcgcaa
     3001 ctcgggcgcg cgccagacgc ggccatcgtc ggggacgacc tcgcccgccg ccatgcgcaa
     3061 caggctcgac ttgccggcgc cgttgcggcc gatgaggccc acgcgctcac ccggttcgat
     3121 caccaggtcg gcatggtcca ggagcggcac gtggccatag gcgagcgaga cgctcgagag
     3181 ttgcagcaac ggcatcccgt tattttaacg ggcgcgagcg gtggccgggg ctgccattaa
     3241 acctttggat cacagatgaa agggatgaac acagatgaac acagataagg cgagtccttg
     3301 aatttcgtgt ctcagcgtcc cgggccacga acgagacgca tcgcattatc tgtgttcatc
     3361 cgtgttcatc cttttcatct gtgctctgaa ggt
//
LOCUS       DATIML010001068         1983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2245230, whole genome shotgun sequence.
ACCESSION   DATIML010001068 DATIML010000000
VERSION     DATIML010001068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2245230"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VLJ38_18395"
     CDS             complement(<1..779)
                     /locus_tag="VLJ38_18395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSU41557.1"
                     /translation="MRFAASIWLLGALGALGVGVLLILGAVLSLRALRRFGDEKLVLE
                     LATARAGGRRAFKGVLLVLSLGLAFVALAQPQYGRGSRVIPATNLDVVIVLDYSKSMY
                     ARDIPPSRIERAKAEMSRLIADLPGARFAAVAFAGDTMAFPLTSDGAAIAQFLRQLSP
                     NDMPVGGTAIGRALEAGRDLLARDPLSKDHRKVMVLVTDGEDLEGDPVQEAQAAAHDQ
                     ITIYVDQIGGRTPEPIPDVNELGQVKGWRTDEQGKPLTTELS"
     gene            complement(776..1924)
                     /locus_tag="VLJ38_18400"
     CDS             complement(776..1924)
                     /locus_tag="VLJ38_18400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSU41558.1"
                     /translation="MTRWLRPAVGVLALLLLALLGAAYPMLARGDELLEARWSEPWAL
                     AALVVVPLVFWRAVFGEDRRTPRLRLGTLAPLAVGPAGARVFLRDVPGIARSVGLVLC
                     IAALARPLNTLRPIATDEEGIDMVVALDLSGSMQAVLDNVPEDLRTYMPPARPGLRPT
                     RLDVAKAVLRDFIARRKTDRIGVVVFGASAYVVSPPTLDYHLLDELVKRMDTRLIDSN
                     GTAIGDALGVAVARLRRSTAKSKAIILLTDGANQGGRLAPEYAAKLANVVGAHIYSIQ
                     IGQGDEAEILQGADLFGQARYVRMPFPVNPKLLKQLSDQTGGHMYVASDATGLQASFH
                     DVLDKLEKTKLSASVAHFEDLYRFLLVPGVLLLALDAVLRALVLRRFP"
BASE COUNT          325 a          652 c          715 g          291 t
ORIGIN      
        1 gagagctcgg tcgtgagggg cttgccttgc tcgtcggtac gccagccctt gacttgcccg
       61 agctcgttca cgtcggggat gggttcgggc gtgcggccac cgatttgatc cacgtaaatc
      121 gtgatctgat cgtgcgcggc cgcttgcgcc tcctggaccg gatcgccttc gagatcttcg
      181 ccgtcggtga cgagcaccat caccttgcgg tgatctttgg acagcggatc gcgcgccaaa
      241 aggtcgcggc ccgcctcgag ggcgcgcccg atggccgtcc cgcccacggg catgtcgttc
      301 ggtgaaagtt gccgtaaaaa ttgagcaatt gccgcaccgt cgctcgtgag cgggaacgcc
      361 atcgtgtcgc cggcaaacgc gacggcggcg aagcgggcgc ccggcaagtc ggcgatgagc
      421 cggctcatct ccgctttggc gcgttcgatg cgcgagggcg ggatatcgcg cgcgtacatg
      481 ctcttcgagt agtcgagcac gatcacgaca tcgaggttgg tcgcagggat cacgcgcgag
      541 ccgcgcccgt attgcggctg cgcgagcgcg acgaacgcca ggccgagcga gagcacgagc
      601 agcacgccct tgaacgcgcg acggccgccc gcacgcgccg tcgcgagctc gagcacgagc
      661 ttttcgtcgc cgaagcgacg caaagcgcgc agcgagagca ccgctcccag gatgagcaac
      721 acgcccacgc cgagcgcgcc gagcgcaccg agcagccaga tggaagccgc gaacctcacg
      781 gaaacctccg gagcacgagc gcgcggagca cggcgtcgag cgccagcagg agcacgcccg
      841 gaacgagcag gaagcggtac aggtcctcga aatgcgcgac gctcgccgag agcttcgtct
      901 tttcgagctt gtcgagcacg tcgtggaagc ttgcctgcaa ccccgtggcg tcgcttgcca
      961 cgtacatgtg gccgcccgtc tgatcggaga gctgtttcaa gagcttcggg ttcacgggaa
     1021 agggcatgcg cacgtagcga gcctggccga acagatccgc gccctgcagg atttcggcct
     1081 cgtcgccctg gccgatttga atactgtaga tgtgcgcgcc gacgacgttg gcgagcttgg
     1141 cggcgtattc gggggcgagg cggccgcctt ggttggcgcc gtcggtgagc aggatgatgg
     1201 ctttgctctt ggccgtgctc cgccgcaggc gcgcgacggc gacgccgagc gcgtcaccga
     1261 tggcggtgcc gttcgagtcg atgagccgcg tgtccatgcg tttcacgagc tcgtcgagca
     1321 ggtggtagtc gagcgtcggc ggtgagacga cgtacgcgct cgcgccgaac acgacgacgc
     1381 cgatgcggtc cgtcttgcgg cgcgcgatga agtcacgcag gaccgctttg gcgacgtcga
     1441 gccgcgtggg gcggaggcca gggcgcgcgg gcggcatgta cgtgcgcaag tcttccggta
     1501 cgttgtcgag cacggcttgc atcgagcccg acaagtcgag cgcgacgacc atgtcgatgc
     1561 cctcctcgtc ggtcgcgatg gggcgcagcg tgttgagggg ccgcgcgagc gccgcgatgc
     1621 agagcacgag cccgacgctc cgcgcgatgc caggtacgtc gcgcaggaac acgcgtgcgc
     1681 ccgccgggcc cacggcgagc ggcgcgagcg tgccgaggcg aagccgcggc gtgcgccgat
     1741 cctcgccgaa tacggcgcgc cagaagacga gcggcacgac aaccaaggcg gcgagcgccc
     1801 acggctccga ccagcgcgcc tccaagagct cgtcgccgcg cgcgagcatc gggtaagccg
     1861 cgccgagcag cgcgagcagg agcagcgcga gcacgccgac cgcgggccgc agccagcgtg
     1921 tcacgacttg ccctccggct cgggcggctt cggttcagtg acgggcgctg cggacggtcc
     1981 tgg
//
LOCUS       DATIML010001069         3414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1963421, whole genome shotgun sequence.
ACCESSION   DATIML010001069 DATIML010000000
VERSION     DATIML010001069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1963421"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1126
                     /locus_tag="VLJ38_18405"
     CDS             113..1126
                     /locus_tag="VLJ38_18405"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSU41559.1"
                     /translation="MAATGLVLSGVLELLHVRAYTSPGALGFCSLGAKLDCAAVALSH
                     WSVLFGVPVPLLGVLGFSALATAAWLGSAWLVPLALAGAALSVALLGVELGSIHALCL
                     LCEAVHGVSIALAIVAVRQRRELAPLGERDHATLVLLPPLGVLVALVLFLPPYFRTVV
                     WKGDLPFASGVTADGAPWIGAREPKLTLEEYTDYLCPHCRAATAWTLKRLAARPSDIR
                     IVRRQFPLARCSATQHGSCERLRFAYCGGQVGRFWQMDRWLFAHGDELKLDHAQAARD
                     LGLDAGRLASCVERPETYARAERESDLAAKRRFVGTPTYVVNGKRIPPETADRYLERG
                     RQD"
     gene            1476..2849
                     /locus_tag="VLJ38_18410"
     CDS             1476..2849
                     /locus_tag="VLJ38_18410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41560.1"
                     /translation="MRQKVIGLVSLLAPAFVGALSGGACSSTNNPLADTLGGTADKLC
                     GPCGHLKTGDVGISGNAKLDGFFSAVAKLNDATASINGDFNANIDALSQVYGVANFDA
                     SANIDTKVDALIASIKGEFKADLKGGVTLNYTPAECHASVNVAIQAQAQCEAKAGCDA
                     KVNPGEVDVQCEGECTGSCSGTCTGGVPTCQVDASAKCEGKCEGTCTFDAAATCDGTC
                     HGKCSGTCSAMDGSGNCNGTCDGKCDGSCDLNAAATCSGTCSGSCEVSAEAKCSGGEA
                     PHCSGTCKGSCNANCTGKVTPPSASASCDATADCQAQASAQANATIDCTPPSVDLSYD
                     FSASASGDASAQADFKAHLAELKVRGIAILQGFSRYDVIIHGKTDASGNVIVQAPVAT
                     LTASVKDLVNNAGSIAADVPVFRLGCAVDAFGEAGTALSTIATNGTANLKAQAKFVTA
                     FTSGFSS"
     gene            complement(2952..3242)
                     /locus_tag="VLJ38_18415"
     CDS             complement(2952..3242)
                     /locus_tag="VLJ38_18415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41561.1"
                     /translation="MPQKPVPTLLTQVVRAATDRLAETPGDPPVVARLIVEIRSDGSR
                     TVARGALDDVLGGEKVAVEARGTTPAALAASLIRSMFSAPLLARVIARRLLK"
BASE COUNT          564 a         1154 c         1155 g          541 t
ORIGIN      
        1 gcgatcccct ggcgcacgcc tgcttcacgg ccgactcgag cggctcgtcc gatctcgcct
       61 cgccacaagc cggctgctgg gggccgcgct gaagcagcgt ctcgcggtcg ccctggcggc
      121 gacgggtctc gttctctccg gcgtgctcga gctcctgcac gtgcgcgcgt acacgtcgcc
      181 cggtgcgctc ggcttctgct cgcttggcgc aaagctcgac tgcgcggccg tggcgctctc
      241 gcattggtcg gtgctgttcg gggtgccggt gccgctgctc ggcgtgctcg gtttttcggc
      301 gctcgcgacc gcggcctggc tcggctcggc gtggctcgtc ccgctcgcgc tcgccggcgc
      361 cgcgctttcc gtcgcgctcc tcggcgtcga gctcgggtcg atccacgcgc tctgcctctt
      421 gtgcgaggcc gtacacggcg tcagcatcgc gctcgcgatc gtcgccgttc ggcagcgccg
      481 cgagcttgcg ccgctcggtg agcgcgacca cgcgacgctc gtgctgttgc cgccgctcgg
      541 cgtgctcgtg gcgctcgtgt tgttcttacc accgtacttc cgcacggtgg tttggaaggg
      601 cgacctgccg ttcgcaagcg gcgtgaccgc cgacggtgcg ccgtggatcg gggctcgcga
      661 gccgaagctc acgctcgagg agtacaccga ctacttgtgc ccgcattgtc gcgccgcgac
      721 ggcgtggacg ctgaagcgcc tcgccgcgcg ccccagcgac attcgcatcg tacgccggca
      781 atttccgctc gcgcgctgct cggcgacgca gcacggcagc tgtgagcgct tgcgtttcgc
      841 ctactgcggc gggcaagtgg gccggttttg gcagatggat cgctggctgt tcgcgcacgg
      901 cgacgagctc aagctcgatc acgcccaggc ggctcgcgac ctcgggctcg acgccggacg
      961 gctcgcgagc tgcgtcgagc ggccggaaac gtatgcacgc gccgaacgcg agtccgacct
     1021 cgccgcgaag cgccgattcg tgggcacgcc gacgtatgtg gtcaacggta agcggattcc
     1081 gcccgagacg gccgatcgtt atctcgaacg cggtcgtcag gactgagcga gcgaagtcgt
     1141 ccgttcgaca gctccgcatt ctgtgcgtga tcattcccag tcgtcgaagt gggcgcacaa
     1201 atgtgacgca ccacgcacga accgcctcag tcattgcgcg cgaggacgtt cacgtcggcg
     1261 cgcgccactc gcacatcgtc ccacctacac atccctacgc atgacattcg agtcctgggc
     1321 ccgttggcct ggcaagtaaa gctgacagga cgcgcgtaga cgtgtaaaaa agctcttcac
     1381 tgaatgcagg ctcgagtgag ccgtcgaacg ccggggttac gtggtttagc gggaacccag
     1441 gcttgttccg aggaacgaag aaggagctct tatccatgag acagaaagta atcgggctgg
     1501 tgtcactgct cgcaccggca ttcgtcgggg cattgtccgg cggcgcatgc agcagcacga
     1561 acaatccgct ggcggacact ttggggggca cggcggacaa gctttgcggc ccatgtggcc
     1621 acctcaagac cggcgacgtc ggcatctccg gcaacgccaa gctcgacggg ttcttttcgg
     1681 ccgtcgccaa actcaatgat gcgacggcga gcatcaacgg cgatttcaac gccaacatcg
     1741 acgcgttgag ccaggtctac ggcgtcgcga acttcgacgc ctccgccaac atcgacacca
     1801 aggtcgatgc cctcatcgcg agcatcaaag gcgagttcaa ggcggatctg aagggcggcg
     1861 tcaccctgaa ctacacgccc gccgagtgtc acgcgagcgt caacgtcgcg atccaggcgc
     1921 aggcgcaatg cgaggccaaa gcgggctgtg acgcgaaggt caacccgggc gaggtcgacg
     1981 tgcagtgcga aggcgagtgc accggctcct gcagcggcac ttgcacgggc ggcgtgccga
     2041 cctgccaggt cgacgcgagc gccaagtgcg agggcaagtg cgaagggacc tgcaccttcg
     2101 acgcagcggc gacgtgcgac ggcacctgcc acggcaagtg ctcgggcacc tgctcggcga
     2161 tggacgggag cgggaactgc aacggtacgt gcgacggcaa gtgcgacggc agctgtgacc
     2221 tcaacgccgc ggccacctgc tcggggacct gctccggcag ttgcgaagtc agcgccgagg
     2281 cgaagtgctc cggcggcgaa gccccgcact gctccggcac gtgcaaaggc tcgtgcaacg
     2341 cgaactgcac cggcaaggtc acgcctccct cggcgagcgc gagctgcgac gccacggccg
     2401 actgccaagc gcaagcaagc gcccaggcga acgcgaccat cgactgcacg ccaccctcgg
     2461 tcgacttgag ctacgacttc agcgcgagcg cgagcgggga cgcgtcagcg caagccgact
     2521 tcaaggcgca cctcgccgag ctcaaggttc gcggcatcgc gatcctccag ggcttctcgc
     2581 ggtacgacgt gatcatccac ggcaagacgg atgcaagtgg caacgtcatc gtgcaggccc
     2641 cggtcgcgac actcacggcc tcggtcaagg acttggtcaa caatgcgggc agcattgctg
     2701 ccgacgtccc ggtgttccgt ctcggttgcg ccgtcgatgc tttcggcgaa gcgggcacgg
     2761 ccctcagcac cattgcgacg aacggcaccg cgaacttgaa ggcccaggcg aagttcgtca
     2821 cggcgttcac gagcgggttc agcagctaac gcgcgaaaca gctgcgaacg acacggccgg
     2881 cgcgttcctc gcaagagggc gcgccggtcg cgttttgtgc gtctacgttg acgtgatgtg
     2941 cggccgcgcc cctacttgag cagccgccgc gcaatcacgc gcgcgagcag cggcgccgag
     3001 aacatcgagc gaatcagtga agcggcgagc gcagcgggcg tcgtaccccg cgcctcgacc
     3061 gcgacctttt cgccgccgag cacgtcgtcg agggcgccgc gcgctaccgt gcgcgagccg
     3121 tccgagcgga tctcgacgat gaggcgcgcg acgaccggag gatcacccgg cgtttcggcg
     3181 aggcggtctg tcgctgctcg aacgacctgc gtcagcaggg tgggaacggg tttttgtggc
     3241 atatccgagc tcggcaggcg ccgatcccat ctaacggtga gcgatgcgga acgaaagccg
     3301 agcagtcagg cggggccggg ctccgtcgtc cgctcgtgca ggggctccgg cgcggaaatc
     3361 gcgagcaagg cgcgccggcc aagctctcgt cctgccacgg caacgagcgc gcgg
//
LOCUS       DATIML010001070         3454 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5714175, whole genome shotgun sequence.
ACCESSION   DATIML010001070 DATIML010000000
VERSION     DATIML010001070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3454
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5714175"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(364..591)
                     /locus_tag="VLJ38_18420"
     CDS             complement(364..591)
                     /locus_tag="VLJ38_18420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41562.1"
                     /translation="MPRVSLGSELWRIFYSAPKNIFTVGRIGKVTRIFGNKVFAGGRW
                     HDSGGRASGFMTKVEAQAWCAAHSPPPRAGK"
     gene            699..1775
                     /locus_tag="VLJ38_18425"
     CDS             699..1775
                     /locus_tag="VLJ38_18425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41563.1"
                     /translation="MLARPFWIIGHNTNTLELVRKAVDEGANALEIDVHDTPAARWVV
                     SHDTPSSDAPELGEFLRQVSDIAREHSTLCLVTLDCKTFNPSLASALFSLARDNWALL
                     AGASARPYIVSIPQRENLGFFEPVFGELRDFEGLMVDEDDDAAAVAKALARARNPCFG
                     DGITTFLPGPDVRPAMELATAIKARDGSIKFTYSWTFTQVASLAEHLDVGVDGIITDN
                     VPGLLKLVRERPSAVRLATAADNPFATDLPSYGLAVRTSEDPSPDGSLELTLHGDRAS
                     ATKVVSASPAGRFEAESTTFVTLLGEDVGTPHSISARAIGAPFALDSIELLTSDGGSA
                     SPVARFETVIAPEVTIKRPIGRSP"
     gene            1772..3310
                     /locus_tag="VLJ38_18430"
     CDS             1772..3310
                     /locus_tag="VLJ38_18430"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HSU41564.1"
                     /translation="MNGRALVVVSSIVLLFSLRSARAEVLEADDLSTPRRAMATFVDA
                     ANHDDWPRAIAVLGVSRSASAERKAQAVELAQELDYVLSRSLSFELDSISDDPQGKPD
                     DGVEIEKVAGLRAKGRVIPIVLSHVSGPPARWVISTGTLANVPELYRERGPSPLERYL
                     PASLLRETLGMARWQWLGLPLAMALAVLFASAIVHLSSRFGAHLAAQTRAVWDDELVV
                     ALRAPGRLFVGVVTFVALVHLMSLPGTPKLVCVRIASTLGIVALVWMLVRVVQVATDL
                     VERRAIHATAGQKDAALRIGGVRTRVRVLRRIVSVVLSFCAGAVILLQFEVVRSIGVS
                     LLASAGVAGIVLGLAAQRTLGSLFAGIQLSITQPIRIGDEVRIENETGTIEEITLTYV
                     VVRVWDERRLIVPMTRFLEQPFQNFTKVSAELHGIVLLNADATLPVDAVRRELDGLLE
                     TNAHWDRRSKAVHVTDVKGRTLELRVLVSAASSDELFDLRAELRERLAAWLATFEGGK
                     YLPK"
BASE COUNT          547 a         1209 c         1101 g          597 t
ORIGIN      
        1 tgcggcgtgc gaactcgttc tatcgttctc aattctaact tctggacctc agtgccgcga
       61 catttggcca gactttccgc agcgcctgca ctgcacaacg ctgcccccga aaaacgacct
      121 ccgcgtcgct tcatgggcga ggagcagaca gacgattacc gaaggccccg aaggtagcct
      181 tgccctccgg cttgcgcaag ccggagatcg ttcactttcc ggccccacgc gtcgcgtcgg
      241 gtcgtccgcg gcgcccggca atccgcccga cactgacccg gaaaaccgcg gttgacccga
      301 gcgcaattcg gcccgttggc cgaccctctt ctgaaacacc aacgagcgtg ctttgccagc
      361 gcgtcacttg cccgcccgcg gcgggggcga atgcgccgcg caccacgctt gcgcctcgac
      421 cttcgtcatg aagcctgacg cgcggccgcc cgagtcgtgc cagcgcccgc ctgcgaagac
      481 cttgttgccg aagatgcggg tcaccttacc gatgcgtcca accgtgaaga tgttcttggg
      541 tgcgctgtag aagatacgcc aaagctcgga gccgagcgaa actctaggca tgtcgtcgca
      601 ccgtacgccg tgccgaggtg agcgtcgagg ctcgctgttc ttgggtcata gcgccccagt
      661 cgctcgacgc gcgcactctg gcctaaagtc cggaggccat gctcgctcgt ccattctgga
      721 tcatcggtca caacaccaac acgctcgagc tcgtgcgcaa agcggtcgac gagggcgcga
      781 acgcgctcga gatcgacgtc cacgacacgc ctgctgcacg ttgggtcgtg agccacgata
      841 cgccgagctc cgacgcgccc gagctcggtg agttcctgcg tcaggtctcc gacatcgcgc
      901 gcgagcactc cacgctctgc ctcgtgacgc tcgactgcaa gacgttcaat ccttcgctcg
      961 cctccgcgtt gttctcgctc gcgcgcgaca actgggcgct gctcgcgggc gcgtccgcgc
     1021 ggccctacat cgtgtcgatc ccgcagcgag agaacctggg atttttcgaa ccggttttcg
     1081 gcgagctccg cgatttcgag ggcttgatgg tcgacgagga cgacgatgcg gccgccgtcg
     1141 ccaaagcgct cgcgcgagcg cgaaatccct gcttcgggga cgggatcacg acatttttgc
     1201 cggggcccga cgtgcgcccc gccatggaac ttgccacggc gatcaaggca cgcgacggca
     1261 gcatcaagtt cacctattct tggaccttca cgcaagtcgc gagcctcgcc gagcatctcg
     1321 acgtcggcgt cgacggcatc atcaccgaca acgtccccgg cttgctgaag ctcgtgcgcg
     1381 agcgtccgag cgccgttcgg ctcgcgaccg cggccgacaa tccgttcgcg accgacctac
     1441 caagctacgg cttggcggtg cgcacctccg aggatccgag tccagacgga agcctcgagc
     1501 tcacgctgca cggcgaccgc gcgagtgcca ccaaggtcgt cagcgcctcg ccggcgggtc
     1561 gcttcgaagc ggagagcacg acgttcgtga cccttctcgg cgaggacgtg ggcaccccgc
     1621 actcgatctc ggcccgcgcc atcggcgcgc cgttcgcgct cgactccatc gagctgctca
     1681 cgagcgacgg cggctcggcg tcgccggtcg cgcgattcga aaccgtgatt gccccggagg
     1741 ttacgataaa gcgcccgatc gggcggtcgc cgtgaacggg cgcgcgttgg tcgtagtctc
     1801 gtcgatcgta ctcctgttct cactgcgctc ggcgcgcgcc gaggtgctcg aagccgacga
     1861 cctttcgaca ccccgccgcg cgatggcgac cttcgtcgac gcggcgaatc acgacgactg
     1921 gccacgcgcc attgccgtgc tcggcgtctc gcggagcgcg tcggccgaac gcaaagccca
     1981 agccgtcgag ctcgcgcaag agctcgacta tgtcctctcc cggagtctgt cgttcgagct
     2041 cgactcgatc tcggacgatc cgcaggggaa gccagacgac ggcgtcgaga tcgagaaggt
     2101 agccgggctg cgcgcgaaag gacgcgtcat ccccatcgtg ctgtcgcacg tgagcgggcc
     2161 gcccgcacgc tgggtgatct cgaccgggac gctcgccaac gtgcccgagc tctatcgcga
     2221 gcgcggcccg agcccgctcg agcgctatct gccggcgagc ctcttgcgcg agacgctcgg
     2281 catggcgcgc tggcagtggc tcgggttgcc gctcgccatg gcgctcgccg tgctcttcgc
     2341 gagcgcgatc gtgcaccttt cgagccgatt cggtgcgcac ctcgccgcgc aaacgcgcgc
     2401 cgtgtgggac gacgagctcg tggtcgcgct gcgcgcaccc gggcgcctct tcgtcggggt
     2461 cgtgacgttc gtcgcgctcg tgcacctgat gagcttgccg ggaacgccca agctcgtctg
     2521 cgtccggatt gccagcacac tcggcatcgt cgcgctcgtc tggatgctgg ttcgcgtcgt
     2581 gcaagtcgcg accgatttgg tcgagcggcg cgcgattcac gcgacggcgg gccaaaaaga
     2641 cgcggcgctc cgcatcggcg gggtacgcac gcgggtccgt gtgctgcgcc ggatcgtgag
     2701 cgtcgtgctc tccttctgcg ctggtgcggt catcctgctg cagttcgagg tggtccgcag
     2761 catcggcgtc tcgctgctcg cctcggccgg cgtcgccggc atcgtgctcg gcctcgccgc
     2821 tcagcgcacg ctgggctccc tctttgcggg catccaactc tcgatcacgc agccgatccg
     2881 tatcggcgac gaagtcagga tcgaaaatga aaccgggacg atcgaggaaa tcacgctcac
     2941 ctacgtggtc gtcagggtct gggacgagcg ccgcttgatc gtgcccatga cgcgttttct
     3001 cgagcaaccc ttccaaaatt ttacgaaggt ctcggctgag ctccacggca tcgtgctcct
     3061 gaacgccgac gccacgttgc cggtcgacgc ggtccggcgc gagctcgacg ggctgctcga
     3121 gacgaatgcg cactgggatc gccgcagcaa ggccgtccac gtcaccgacg tcaagggccg
     3181 cacgctcgag ctccgcgtgc tcgtgtcggc ggcgagcagc gacgagctct tcgatctacg
     3241 cgccgagctc cgcgaacggc tcgccgcgtg gctcgcgacg ttcgaaggcg gcaagtactt
     3301 acccaaatag catagcgcga cgcagcggat ttcggcggtt cccggtcgat taggggcaac
     3361 gtccccggtt cgctagcagt gccccggcta catccaaagc cgcaggtagc tctcggcgat
     3421 ctcgcgcagc cgcgcagagc cgaagctcgg atcg
//
LOCUS       DATIML010001071         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1384434, whole genome shotgun sequence.
ACCESSION   DATIML010001071 DATIML010000000
VERSION     DATIML010001071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1384434"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1365
                     /locus_tag="VLJ38_18435"
     CDS             <1..1365
                     /locus_tag="VLJ38_18435"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /protein_id="HSU41565.1"
                     /translation="RATIRRQEERASMLGQFRTALVTSFIAMGFLGCNKRDERQPENT
                     TPPATTPEARTNPNAASTGATNTPGANGPTAANGTTGANGMNGANGAPGANGTPGANG
                     TNGTTGTSAERVNDSNAKDALSKADKDMKEVLDEFAALGGKPLETLTPAEARKQPTLA
                     DAEKALLKKQGKSTAPEEVAKVENKTIRSGSASIPARIYTPKEGKAPYPVVVYFHGGG
                     FVVGSNDSYDASARGLANGAKAIVVSVDYRKAPENKFPAAHEDADAAYAWVLKNAGSF
                     SGDPKNVAVAGESAGGNLAINVAIDARDKSEQLPVHVLAVYPVATSTSTSQTFQEYAE
                     AKPLNRAMMTWFMDKYTRSPADAKDRRLDLLNAKLAGLPPTTIITAELDPLRADDEAL
                     EKKLDDAKVSVKLKNYEGVTHEFFGLGAVVGDAKDAMDFATSRLKDAFAKHANQSASV
                     EGTR"
     gene            1458..1703
                     /locus_tag="VLJ38_18440"
     CDS             1458..1703
                     /locus_tag="VLJ38_18440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41566.1"
                     /translation="MHLRSDGEAHMPSNKKLVPQTGKLANPKVPIDANNPKTASPSYQ
                     ADARGPADQDGNEEQARRQGAAGPARHSTNKPRQAKR"
BASE COUNT          388 a          575 c          569 g          193 t
ORIGIN      
        1 cgcgccacca tccggcgaca ggaggaacga gcatccatgc tgggacaatt tcgtacggcc
       61 ctagtgacga gcttcatcgc gatggggttc ctcggctgca acaagcgaga cgagcggcaa
      121 ccggagaaca cgacgcctcc ggcgacgact ccggaggcgc gcacgaaccc gaacgctgcg
      181 agcaccggtg cgacgaacac gcccggggcg aacggaccga ccgccgcgaa cggaaccacg
      241 ggggcgaacg ggatgaacgg cgccaacggc gcgcccggcg cgaatgggac ccccggtgcg
      301 aacggcacga acggcacgac gggcacgagc gctgagcgcg tcaacgactc gaacgcgaag
      361 gacgcgcttt cgaaagccga caaagacatg aaggaggtgc tcgacgagtt cgccgcgctc
      421 ggcggcaagc cgctcgagac gctcacgccg gcggaagcgc gcaaacagcc gacgctcgcc
      481 gacgccgaga aggcgctctt gaagaagcaa ggcaagagca ccgcgccgga agaggtggcc
      541 aaagtcgaaa acaagaccat tcgctcgggc agcgcgagca tccccgcgcg catttacaca
      601 ccgaaggagg gcaaggcgcc gtatccggtc gtcgtgtact tccacggcgg cgggttcgtc
      661 gtcggctcga acgacagcta cgacgcgtcg gcgcgcggcc tcgcgaacgg tgccaaggcg
      721 atcgtcgttt cagtcgatta ccgcaaagcg ccggaaaaca agttccccgc cgcgcacgaa
      781 gacgccgacg cggcgtacgc gtgggtgctg aagaacgcgg gctcattctc gggtgatccg
      841 aagaacgtcg ccgtcgcggg cgagagcgcg ggcggcaatc tcgcgatcaa cgtcgccatc
      901 gacgcgcgcg acaagagcga gcagctaccg gtgcacgtcc tcgcagtgta cccggtcgcg
      961 acgagcacct cgacttcgca gacgttccaa gagtacgccg aggccaagcc gctcaaccga
     1021 gcgatgatga cgtggttcat ggacaagtac acgcgcagcc ccgcggacgc gaaggaccgc
     1081 cgactcgatc tcttgaacgc gaagctcgcg gggttgccgc cgacgaccat catcacggcg
     1141 gagctcgacc ccttgcgcgc cgacgacgaa gcgctcgaaa agaagctcga cgacgctaag
     1201 gtctccgtga agctcaagaa ctacgagggc gtcacgcacg agttcttcgg gctcggcgct
     1261 gtcgtgggcg acgccaagga cgcgatggat tttgccacct cgcgcctgaa ggacgccttc
     1321 gcgaagcacg ccaaccagtc cgcgagcgtc gagggcacgc gctaggacaa gaacgactga
     1381 gcggggcgtc gcgtcgtagg atcgcgcgac gccccgctcg gggcacccca gggcccaaag
     1441 ctacgctggt acgcggcatg cacctgcgtt ccgacggaga agctcacatg ccctcgaaca
     1501 agaagctcgt gcctcaaacc ggcaagcttg ccaatcccaa ggtcccgatc gacgccaaca
     1561 atcccaagac ggccagtccg agctaccaag cagacgcgcg cggtcccgca gaccaagacg
     1621 gcaacgagga gcaggcacga cgccagggtg ccgccggccc agcgcggcac tcgacgaaca
     1681 aaccgcgaca agcgaaacgt tgagcggggg cgagatcgcg taaac
//
LOCUS       DATIML010001072         3100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1384808, whole genome shotgun sequence.
ACCESSION   DATIML010001072 DATIML010000000
VERSION     DATIML010001072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1384808"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..821
                     /locus_tag="VLJ38_18445"
     CDS             <1..821
                     /locus_tag="VLJ38_18445"
                     /inference="COORDINATES: protein motif:HMM:NF016250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HSU41567.1"
                     /translation="TPHASAAALATPKPMAPAAATPVAAPEPSLAPPVAAPAPAAAPA
                     PAPAATPPGASPAWLRTDKPVAKRPLELQQGPSPLRVGGMLLLVACLGGVAWYAKKKR
                     QGATPATQKAGLRVIGTTRVGAKASAVVVEVSGKRLLLGVTDQNVSTLAWLDDEPNAA
                     LDDARDAGGLGARMSRGAYEPDDVAAEGPSGFLRLLRNAVGSAAIPPDLAAQRGPARS
                     VAARVPGAAPKPAAVDEIVQATRDEVRISRREPEEPIAFEGQVMGLAKRRKESP"
     gene            824..1483
                     /gene="fliP"
                     /locus_tag="VLJ38_18450"
     CDS             824..1483
                     /gene="fliP"
                     /locus_tag="VLJ38_18450"
                     /inference="COORDINATES: protein motif:HMM:NF009438.0"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HSU41568.1"
                     /translation="MNAAAEVLQNQTLAPSLKILLILSLLGVLPAIILATTSFVRIVV
                     VLSFIRQGVGTAQSPPSQVLIGLALFLTAFTMSPVVKEMKHVAYEPYAAGSIGDLEAL
                     QRASVPLKAFMLRQTREADLRLFYDATHTALPATPEDVGLELAVPAFVISELTTAFQM
                     GVVILLPFLIVDLAVSSLLMSMGMMMVPPSTLSLPIKLVLFVLVDGWSLIAGSLLRSF
                     A"
     gene            1480..1749
                     /locus_tag="VLJ38_18455"
     CDS             1480..1749
                     /locus_tag="VLJ38_18455"
                     /inference="COORDINATES: protein motif:HMM:NF013478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliQ"
                     /protein_id="HSU41569.1"
                     /translation="MTVDGAVELFTRAFIAAVKFAGPMLLVALVVGVVVGILQAATQV
                     NEASVSFGAKLLAVGITFAALGSWTLRQFVDYTSRTLASISDIVR"
     gene            1807..2607
                     /locus_tag="VLJ38_18460"
     CDS             1807..2607
                     /locus_tag="VLJ38_18460"
                     /inference="COORDINATES: protein motif:HMM:NF013478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HSU41570.1"
                     /translation="MNALAFVETSLEGRALVFLCVLARISGLVVVAPGPWTVAPLRVR
                     AAFTVLLAFVATLSPLARGVELSEKPLTVALAITSDFAVGACMGMTVRLVVAVSEIAG
                     EFIAPQLGIGVAQLFDPHQHTSETPIGAVFRHLALLVAVLVGLHRQVLAALLGSFHVL
                     PPGELVDAGRAGGAILALTTQSVEAGIRIALPTVAVLFMVQIALAFIARAAPALQIFS
                     VGFAVTLGVGLLVIVVSLPDSARLMITEMSHVDGRVQSLVALLAEPPP"
     gene            2604..>3100
                     /locus_tag="VLJ38_18465"
     CDS             2604..>3100
                     /locus_tag="VLJ38_18465"
                     /inference="COORDINATES: protein motif:HMM:NF013479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EscU/YscU/HrcU family type III secretion system
                     export apparatus switch protein"
                     /protein_id="HSU41571.1"
                     /translation="MSDDDDSEKTQEATPERRRQARENGQFPRAKDTGSVAATIALLL
                     GLSGFGSTFAGEIRSFALRCFRDTAAVANAGFDVIGHEAAITLAGVIGPIAGIAALAA
                     VAAGLWEAGFNPELELAMPKWERLDLIAKLGQLFSPKAAAASTLLALGRVGAVGFVAY
                     QVIQR"
BASE COUNT          437 a         1101 c         1026 g          536 t
ORIGIN      
        1 ccacgccgca cgcttcggcc gcagcgctcg ctacgcccaa gcccatggcg cccgctgcgg
       61 cgacgcccgt cgccgcgccg gagccgtcac tcgcgccccc cgtggcggcg cccgctcccg
      121 cggcggctcc tgcgcccgca cccgccgcaa cgccgcccgg agcgtcaccg gcttggctcc
      181 gcaccgacaa accggtggcg aagcgtccgc tcgagctgca gcaggggccg agcccgctgc
      241 gtgtaggtgg catgttgctg ctcgtcgcct gcctcggtgg cgtcgcttgg tacgcgaaaa
      301 agaagcgcca gggtgcgaca ccggccactc aaaaggccgg cttgcgcgtg atcggcacga
      361 cgcgcgtcgg cgcgaaggct tcggcggtcg tcgtcgaggt ttccggcaag cggctcttgc
      421 tcggcgtgac ggaccaaaac gtgagcacgc tcgcctggct cgacgacgag ccgaacgccg
      481 cgctcgacga cgcgcgcgat gcgggcggac tcggtgcgcg aatgtcacgt ggcgcgtacg
      541 agccggacga tgtcgcggcg gagggaccga gcggcttctt gcgtctcctg cgcaacgccg
      601 tcggcagcgc ggccatcccg cctgacctcg ccgcgcagcg cggtcccgca cgcagcgtcg
      661 cggcccgcgt tcccggcgcc gcaccgaaac ctgcggccgt cgacgaaatc gtgcaagcga
      721 cgcgcgacga agtgcgcatc tcgcggcgtg agcccgagga gccgatcgcg ttcgagggcc
      781 aagtgatggg cctcgccaag cggcgcaaag agtcgccgtg aacgtgaacg ccgcagcgga
      841 agtgctgcaa aatcagacgc tcgcgccgtc gctcaagatc ctcctgatct tgagcctgct
      901 cggcgtgctg cccgcgatca tcctggcgac cacgtcgttc gtgcgcatcg tggtcgtgct
      961 ctccttcatc cgtcagggcg tcggcacggc gcagtcgccg ccgagccaag tgttgatcgg
     1021 actcgcgctg ttcctcacgg cgttcacgat gtcgcccgtg gtcaaagaga tgaagcacgt
     1081 ggcttacgag ccgtacgcgg cgggcagcat cggggacctc gaagcgttgc agcgcgcgag
     1141 cgtgccgctc aaggcgttca tgctgcgcca gacgcgtgag gccgacctgc ggctcttcta
     1201 cgacgcgacg cacacggcgc tcccggcgac gcccgaggac gtgggtctcg agctcgccgt
     1261 gccggcgttc gtgatctccg agctcacgac ggcgtttcag atgggcgtcg tcatcctctt
     1321 gccgttcttg atcgtcgatc tcgccgtgtc gtccttgctc atgagcatgg gcatgatgat
     1381 ggtgccgcca agcacgctca gtttgccgat caagctcgtg ctcttcgtgt tggtcgacgg
     1441 ctggagcctg atcgcaggct cgctactcag gagttttgca tgacggtcga tggtgcagtc
     1501 gagctcttca cacgtgcctt catcgcggcg gtgaaattcg ccggtcccat gctgctcgtc
     1561 gcgctcgtcg tgggcgtcgt cgtcggcatc ttgcaagcgg ccacgcaagt gaacgaagcg
     1621 agcgtgagct tcggcgcgaa gctcctcgcc gtcggcatca cgttcgccgc gctcggctcc
     1681 tggacgctgc gccagttcgt ggactacacc tcgcgcacgc tcgcgagcat ctccgacatc
     1741 gtccgatgaa gaacaaaatt cgactcatcc gtcgatgaaa cagctgttca agaactctcg
     1801 gctaagatga acgcgctcgc cttcgtcgag acttcgctcg aagggcgcgc gctcgtgttt
     1861 ctgtgcgtgc tcgcgcgcat ctccgggctc gtcgtggtcg cgccgggccc ctggacggtc
     1921 gcgcccctgc gcgtgcgcgc ggcgttcacg gtgctgctcg ccttcgtggc gacgctgtcg
     1981 ccgctcgctc gcggcgtcga gctctccgag aagccgctca cggtggcgct cgcgatcacg
     2041 agcgatttcg ccgtcggcgc gtgcatgggc atgacggtgc ggctcgtcgt cgcggtctcc
     2101 gagatcgcgg gcgaattcat cgcgccccag ctcggcatcg gcgtcgcgca gctgttcgat
     2161 ccgcaccagc acacgtccga gacgccgatc ggcgccgtct ttcggcacct cgcgctgctc
     2221 gtcgccgtgc tcgtcggcct gcatcggcag gtgctcgcgg ccctgctcgg tagctttcac
     2281 gtgctcccgc cgggcgagct cgtcgatgcc ggccgcgcgg gcggtgccat cctcgcgctc
     2341 acgacccaga gcgtcgaggc cggcatccgc atcgcgctgc cgaccgtggc cgtgctcttc
     2401 atggttcaaa tcgcgctcgc gttcatcgcg cgcgcggctc cggccctaca aatcttctcc
     2461 gtcggcttcg ccgtcacgct cggcgtcggc ctgctcgtca tcgtcgtatc gctgcccgac
     2521 agcgctcggc tcatgatcac cgaaatgtct cacgtcgacg ggcgggtgca gtcgctcgtg
     2581 gcgctgctcg cggagcctcc gccgtgagcg acgacgacga cagcgagaag acacaagaag
     2641 cgacgccgga acggagacgt caggcgcggg agaacggcca attcccccgc gccaaagaca
     2701 ccgggtccgt ggccgccacg atcgcgctcc tcttgggact ctcgggtttc ggcagcacgt
     2761 tcgccggcga gatccgaagc tttgcgctcc gctgttttcg tgacaccgcc gcggtcgcca
     2821 acgcgggctt cgacgtgatc ggccacgagg cggccatcac gctcgccggg gtcatcggac
     2881 ccatcgccgg catcgccgcg ctcgccgccg tcgctgcagg gctgtgggaa gcgggcttca
     2941 atcccgagct cgagctagcc atgcccaagt gggagcggct cgatctcatc gcgaagctcg
     3001 ggcaactgtt ctcgccgaaa gcagccgccg cgagcacgct cttggcgctc gggcgcgtcg
     3061 gcgccgtcgg cttcgtcgct taccaagtca ttcagcgcga
//
LOCUS       DATIML010001073         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3114428, whole genome shotgun sequence.
ACCESSION   DATIML010001073 DATIML010000000
VERSION     DATIML010001073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3114428"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1055
                     /locus_tag="VLJ38_18470"
     CDS             <1..1055
                     /locus_tag="VLJ38_18470"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41572.1"
                     /translation="RRLGGGGMGEVFVVEHRELGRCFAAKILHARLAAVPHVVDRMRL
                     EGQTLARLSHPNVVAIQGFDTTPEGRPYLVIELLSGQSLTETLQARGALPVGVAIQYG
                     KELLSGLAAAHDIGVVHRDVKPDNVFLAESPERGAPVLKVIDFGIARVLPTAPPEAPK
                     PLVIPTATGEVLGTPRFLSPEGALGLRVDERADVYAAALVIYTMVTGRGPFDHVETEE
                     AVLGAHVNETPAPPSEHALEPVPAELDALLLRALSKEPAARFGSAREFKTELDKVGEL
                     LARPAGWLETTAYRRHEGGNELPEDAPPPSVVAGESVPRLSRRAVGTVVVFAVLALLA
                     SVVAVVSVGIHLRGAP"
     gene            1266..>2085
                     /locus_tag="VLJ38_18475"
     CDS             1266..>2085
                     /locus_tag="VLJ38_18475"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41573.1"
                     /translation="MEADADKGPLQVGGKLLKYTIRGLLGRGGYAWVYDGYDAFLDVE
                     VAIKVLHRPGGVTADMLRRGQAEAKFLYRLRHENVVEVLDAGITDAGLYIVMELLRGP
                     TVRLRLQKDGPMPLGQALPFFAQVCDGIGAAHAIKAIHRDIKPENLVIQPGNRAKVLD
                     FGVVKVIDAVGGTTERDVVHGTVLYLSPEQLNGVTATPRSDVYALGLTLFEALYGKHP
                     LLLRNEHPTQAELPWLQLTVTPPRLDKLDGRIPRELGRLVERMLVKDPALRIASM"
BASE COUNT          326 a          709 c          692 g          358 t
ORIGIN      
        1 ttcgccgtct gggtggtggc gggatgggcg aggtcttcgt cgtcgagcat cgcgagctcg
       61 gccgatgctt cgccgcgaaa atcctgcatg cgcggctcgc cgccgtgcct cacgtcgtcg
      121 atcgcatgcg gctcgagggg cagacgctcg cgcgcctgag ccatccgaat gtcgtggcaa
      181 tccagggctt tgacacgacc cccgagggac gaccctattt ggtgatcgag ctcctgtcgg
      241 ggcagtcgct caccgaaacg ctgcaagcgc gtggcgcctt gcccgtcggc gttgccatcc
      301 agtacggcaa ggagctcctc tcggggctcg ccgccgcgca cgacatcggt gtcgtgcatc
      361 gtgatgtgaa gcccgacaac gtcttcctcg ccgaaagccc ggagcggggc gcgccggtgc
      421 taaaggtcat cgatttcggg atcgcgcgcg tgctgccgac tgcgccgccc gaagcaccga
      481 agccgctcgt cattccgacc gccacgggcg aggtgctcgg cacgccgcgc ttcttgagtc
      541 ccgagggtgc actcgggttg cgcgtcgatg agcgcgcgga cgtctacgcc gccgccctcg
      601 tcatctatac gatggtgacg ggccgcgggc ccttcgatca cgtggagacc gaagaagccg
      661 tccttggcgc gcacgtgaac gaaactccag cgccgccctc ggagcacgcg ctcgagcccg
      721 ttccggccga gctcgacgcc ttgctcttga gagcgctcag taaggagcct gctgcgcgct
      781 tcgggagcgc gcgcgaattc aaaacggagc tcgataaggt cggtgagctc ctggctcgtc
      841 cggctggctg gctagagacc acggcttatc gccgccatga aggagggaac gagctacctg
      901 aggatgcgcc gccgccgagc gtcgtggccg gcgagtccgt gccgcgtctg tcacgtcgtg
      961 cggtcgggac cgtcgtggtg ttcgcggtgc tcgcgctgct cgcttcggtc gttgccgtcg
     1021 tgagcgtcgg catccatctg cgcggcgcgc cctaaagaaa tcgtcgggct cgccagcaga
     1081 tttccgaacc ggagggctga agtggccgat gtaagggggc ccatgacgga ctccagcgtt
     1141 gccgtggccc ggatccgtcc ggctacttgc cagggtcggg gcgagtgaag gtgccgcttt
     1201 cgctgattat tttgggggct cgccgccccg agcccggggg ctccgctaag atgccgggcg
     1261 caaggatgga agcggacgcc gataagggcc ccctccaggt cggcgggaag ctccttaaat
     1321 atacgattcg ggggctgctc ggtcgcggcg gctacgcttg ggtttacgac gggtacgacg
     1381 ccttcctcga cgtcgaggtg gccatcaaag tgctgcatcg cccgggcggc gtcaccgcgg
     1441 acatgctgcg ccgcggccag gcggaggcga aatttctcta ccggctccgc cacgaaaacg
     1501 tggtcgaagt gctcgacgcc ggcatcacgg acgcagggct ctacatcgtc atggagctct
     1561 tgcgcggccc gaccgtccgc ttgcggctcc agaaggacgg gcccatgccg ctcgggcagg
     1621 cgctcccgtt cttcgcgcaa gtctgcgacg gcattggtgc ggctcacgcc atcaaggcca
     1681 ttcaccgcga catcaagccg gaaaacctcg tcatccagcc cggcaatcgc gccaaggtcc
     1741 tcgacttcgg cgtcgtcaaa gtcatcgatg ccgtcggcgg cacgaccgag cgcgacgtcg
     1801 ttcacggcac cgtcctctat ctctcgcccg aacaactgaa cggcgtcacc gcgacaccgc
     1861 gcagcgacgt gtacgcgctc ggtctcacct tgttcgaggc cttgtacgga aaacacccgc
     1921 tgctcctgcg caacgagcac ccgacgcaag cggagctccc ctggttgcag ctcaccgtca
     1981 cgccgccgcg gctcgacaag ctcgacggcc gcatcccgcg cgagctcggg cgcttggtcg
     2041 aacgcatgct cgtcaaggat cccgcgctcc gcatcgcgtc catgc
//
LOCUS       DATIML010001074         2923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_224607, whole genome shotgun sequence.
ACCESSION   DATIML010001074 DATIML010000000
VERSION     DATIML010001074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224607"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /locus_tag="VLJ38_18480"
     CDS             complement(<1..1383)
                     /locus_tag="VLJ38_18480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020464899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSU41574.1"
                     /translation="MPINDTSASAIDDEFERSILPALTEYATIPNKSPLFDPEWRAAG
                     HMDRAVELLANWARPRLPAGATLDVVRLGERTPVILIEIPASGGAEGNVLFYGHLDKQ
                     PEMSGWREGLGPWQPVREGERLYGRGVADDGYALFAALTAVNAVRRDGLPHARSLILI
                     EACEESGSRDLPAYVEHLAPRLGTPSLVICLDSGCANYDALWVTTSLRGLVLGTLEVS
                     LLREGVHSGDGTGVIAASERVLRILLDRLEDSRTGVMLVPELETPVPAARRVQAERTA
                     AALGDELWRKFPLQAGVAPVTEDLAELILNRTWRPGLALTAAEGWPPIAAGGNVLRPF
                     TKLTLSVRIPPRVEPALAARALEATLERDPPYGARVKWNLVGANAGWDAPPVSSWLEG
                     ALDRASQRHFGSPAFYLGEGGTIPFMHLLGEKFPRAEFCITGVLGPGSNAHGPNEFLH
                     VPTVKKLTRAM"
     gene            complement(1393..2535)
                     /locus_tag="VLJ38_18485"
     CDS             complement(1393..2535)
                     /locus_tag="VLJ38_18485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU41575.1"
                     /translation="MPLLTLPHVGVSSPSIRAHALVFEDPRSAAVLARLRRLAPSLAT
                     VLVTGETGTGKELVARHIHELSRPGRPFLAVNCGAFAEGLLESELFGHEKGAFTGAVG
                     AKAGWFEAAEGGTLFLDEIGDLPLAAQVKLLRVLQEHEVVRLGSRRPKSVDVRLVAAT
                     NVRLEEAVASGRFRADLFYRLNVATLLLPPLRERPGDILPLALHFLGVYGHKLQSGPV
                     VLTSDAERRLLEHAWPGNIRELENVIHHALLVCHGGRVTAADLRLTPLVPLRSASPAG
                     RELGSSRQALETALLELFERNPPDLFALVEQTLMQTAYRYCDDNQLETARLLGLSRNV
                     VRARLIQYGELQGSVRRSPPPRLPAKEPARDDPRVVSLAPARRQLG"
     gene            complement(2635..>2923)
                     /locus_tag="VLJ38_18490"
     CDS             complement(2635..>2923)
                     /locus_tag="VLJ38_18490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41576.1"
                     /translation="KMTVVFVTHDVDEAVFLSDRVLVLSERPGRVHAELEVALPRPRT
                     HDLFTAPDFVALKRRGLDALLSASPRRPRASEPATESAPAMTPAFSRNLEA"
BASE COUNT          472 a          957 c         1049 g          445 t
ORIGIN      
        1 catcgcgcgc gtgagctttt tgaccgtcgg aacgtgcaga aattcgttgg ggccgtgggc
       61 gttcgagccc gggccgagga cgccagtgat gcagaactcg gcgcgcggaa acttttcgcc
      121 gagcaggtgc atgaacggaa tggtgccgcc ttccccgagg taaaaggcgg ggctaccgaa
      181 atgccgctgg gaggctcggt cgagcgcgcc ttcgagccag ctcgagacgg gtggcgcgtc
      241 ccagccggcg ttcgcgccga cgaggttcca cttcacgcgg gcgccgtacg gtgggtctcg
      301 ctcgagcgtc gcttccagcg cgcgtgcggc gagcgcgggt tcgacgcgcg gtgggatgcg
      361 caccgacagc gtgagcttgg tgaaaggccg aagcacgttg ccgccggccg cgatgggtgg
      421 ccagccttcc gcggcggtga gcgcgaggcc cgggcgccac gtgcgattca ggattagctc
      481 ggcgaggtcc tcggtgacgg gcgctacgcc cgcttgcagc gggaatttgc gccagagctc
      541 gtcgccgagc gcggccgcgg tgcgctcggc ctggacgcgg cgcgcggcgg gaacgggcgt
      601 ttcgagctcg ggcacgagca tgacgccggt gcggctgtcc tcgagccgat cgagtaggat
      661 gcgtaggacg cgctcgctcg cggcgatgac gcccgtgcca tcgcccgaat gtacgccttc
      721 gcgcagcagc gaaacctcga gcgtaccgag gacgaggccg cgcagcgagg tcgttaccca
      781 gagcgcgtcg tagttggcgc agccggaatc gaggcagatc acgagcgaag gcgtgccaag
      841 ccgcggcgcg aggtgctcca cgtacgccgg taagtcccgg ctgcccgact cctcgcacgc
      901 ctcgatcaga atcaacgagc gcgcgtgcgg cagcccgtcc cggcgcacgg cgttgacggc
      961 cgtgagcgcc gcaaaaagcg catagccgtc atcggcgacg ccgcgtccgt agaggcgttc
     1021 gccttcgcgc accggctgcc agggaccgag tccttcgcgc cagccgctca tctccggctg
     1081 cttgtcgagg tggccgtaga agaggacgtt gccttcggcg ccgcccgacg ccgggatctc
     1141 gatcaagatg acgggcgttc gctcgccgag ccgcacgacg tcgagggtcg ctcccgcggg
     1201 caaacggggg cgcgcccaat tcgccaagag ctcgacggcg cgatccatgt ggcccgccgc
     1261 gcgccactcc ggatcgaaca gcggcgactt gttcgggatg gtcgcgtatt cggtgagtgc
     1321 cgggagaatc gaacgctcga actcgtcatc gatggcgctg gcggacgtgt cgttgatggg
     1381 cacgcacgca gtttacccaa gctggcggcg cgcgggagcc agtgaaacga cgcgcgggtc
     1441 gtcgcgggcg ggctctttgg cgggtagcct gggcggtggg gagcggcgca cgctgccttg
     1501 cagctccccg tactgaatca aacgggcccg cacgacgttc cggctcaagc cgagcagacg
     1561 cgcggtctcc agctgattgt cgtcgcagta gcggtacgcc gtctgcatca acgtctgctc
     1621 gaccagcgca aacaggtcgg gtggattgcg ctcgaagagc tcgagcaatg ccgtttcgag
     1681 cgcttgccgt gaggagccga gctcccgtcc cgcaggactc gcgcttcgca ggggcacgag
     1741 cggcgtcagg cgcaagtcgg cggccgtcac gcgcccgccg tggcacacga gcagcgcgtg
     1801 atggatgaca ttctcgagct cgcgaatgtt acccggccac gcgtgctcga gcagccgtcg
     1861 ctcggcgtcc gacgtgagca cgacgggccc gctctggagt ttgtgcccgt agacgccgag
     1921 aaaatgcagc gcgagcggca ggatgtcccc aggacgctcg cgtagcggcg gcagcagaag
     1981 cgtcgcgacg ttgagccgat agaacagatc ggcgcgaaaa cggcctgacg cgaccgcctc
     2041 ctcgagtcgc acgttcgttg ccgcgacgag gcgcacgtcc acggacttcg gccgccgcga
     2101 accgagtcgc acgacctcgt gctcttgaag cacacgcagg agcttcacct gtgccgcgag
     2161 cggcaggtca ccgatctcgt cgaggaatag cgtgccgccc tctgccgcct cgaaccaacc
     2221 cgccttggcc ccgaccgcgc ccgtgaacgc gcccttctcg tgcccgaaga gctcgctctc
     2281 gagtaggccc tcggcgaacg cgccgcaatt gactgcgaga aacgggcgtc cagggcggct
     2341 gagttcgtga atgtgtcgtg cgacgagctc tttgcccgtg ccggtctcgc ccgtgacgag
     2401 cacggttgcg aggctcgggg cgagtcgtcg aagccgcgcg agcacggccg ccgagcgcgg
     2461 atcctcgaac acgagggcgt gggcacgtat cgagggagac gagacgccca catggggcag
     2521 cgtgagcagc ggcatgttct tcctgccgca agctataatg taatggaaac ttgtccacca
     2581 ccctgtcgga agccggccgg gccgctgggc aggctccgga gcgccgctgg gtcgctaagc
     2641 ctctaaattc cttgagaaag ctggcgtcat tgctggcgcg gactccgtcg caggctcact
     2701 ggctcgtggg cggcgcgggc tggcggagag cagcgcgtcg agcccccggc gcttgagcgc
     2761 gacgaagtcg ggcgccgtga acaggtcgtg cgtccgcggt cgtggcagcg cgacctcgag
     2821 ctcggcgtgc acgcggcccg gtcgttcgct gagcacgagc acgcggtcgc tcaagaatac
     2881 ggcttcatcg acgtcgtgcg tcacgaacac aacggtcatt ttg
//
LOCUS       DATIML010001075         6788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_805892, whole genome shotgun sequence.
ACCESSION   DATIML010001075 DATIML010000000
VERSION     DATIML010001075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6788
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805892"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(120..866)
                     /locus_tag="VLJ38_18495"
     CDS             complement(120..866)
                     /locus_tag="VLJ38_18495"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: protein motif:HMM:NF003625.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HSU41577.1"
                     /translation="MVRLHINIDHVATLRNARKTLYPDPILAAGLCELAGADGITAHL
                     REDRRHMLDGDIERLRAALTTVLNLEMAATDEMLAIAERIRPDVITLVPERREELTTE
                     GGLDVLATRRAVEKVAKRAAASGIKLSLFIAPDSQQIEASRELGAQQIELHTGEYAHA
                     HGAARAEALSRLARGARLAQQLGLEVAAGHGLTRANVGPITAIAEIEELNIGHAVIGD
                     AVLVGLERAVRDMRAAMERGVAARPRGSAA"
     gene            1068..2357
                     /locus_tag="VLJ38_18500"
     CDS             1068..2357
                     /locus_tag="VLJ38_18500"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSU41578.1"
                     /translation="MPGAPSDQKPPRRARPGRKLALAMLVAAVVGAALAITPRARKSP
                     RVSGPPAGAQRPGPRAVPSEPDATPTDATTPEDAAAEAAAPTSSAEPYVELDGGTLRE
                     RNDVLITNMQHVLGLSDAQVAAVRAVFAGSEYIGQGNPAVSQHPLSRADCLARRVQAS
                     NLPAPDLRCGAPNMVPLYDPSAGETPAQAKVCIDQYEFPNIECEFPVVWVRANEAQTL
                     CHALGKRLCDAHEWEGACAGAVKAPEAEYRFNDRRIADQYFHNKSREIVWAYGKEKNH
                     ALCATGSKKGPKCPTPSWSGCGTNDYPAGSFPACVSPLGVFDLHGNAAEHMNFPRTPE
                     ELGSRGGSGETEMKGSWFIFLQAEAHEDDCRWRAPDWHVTKIDDPNSHRNYHLGFRCC
                     RDLEAPDASTPHDASTPQDASTPQGASTPQGASTDAQ"
     gene            complement(2361..5498)
                     /locus_tag="VLJ38_18505"
     CDS             complement(2361..5498)
                     /locus_tag="VLJ38_18505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MXAN_5808 family serine peptidase"
                     /protein_id="HSU41579.1"
                     /translation="MLRALERLGRVVVVLGVFAVASYFAVRFDTGGLWRGLAAAHVAA
                     APGQPNAPYDLTQLVAVRETLNTIRNKYVDPSRVKPRQMFLSALNQIQKEVAQVIIRY
                     DDKTSKVWVQVDADSKDFRVDNVQGPWDVAARLREVFSFLQAHLKDTGVDLREVEYAA
                     CNGMLRTLDPHSVFLSPDAYREMNISTSGHFGGLGIVISIRDQMLTVMKPMPGTPAGR
                     SGIKKLDRITKINNESTLNMPLDDAVQRLRGKPGSKVTIWIQRDGSDGWQGSRPFELL
                     REEIQVKSVEARQLQPGIGYVRIKQFVSSTSDELDAALTDFHKKDKLKGLVLDLRSNP
                     GGLLDQAAQVADRFLDEGVIVATVGASEGRDEKRAVRAGTEPPYPIVVLVNGASASAS
                     EIVAGALKNLDRAVIVGQTTFGKGSLQLVYPHVTPDNAALKLTIAQYLTPGDYSIQGV
                     GVTPDVELDPMTADTVDMDLFRSERSLRERDLTKSLNTTAHRTSDRPAFTLRYDLPEK
                     TRAAIRDRGDDLDDEFELDFPIKMAQGLVAKLSPGRRPEQVRGAKQYLDKLQDTEVEA
                     LSADLAKLGIDWTAPPKDATGPTANDYDVKVTTDRPNDTIVAGDGLTLTVSVKNKGKA
                     PIYQLRAVTKSDGPYWDEKELAFGRIQPGETRTANVPLGFCDLDGRKPGSTKPVPEDA
                     KRVCKIPKDANTRQDIVRVQFSAEGAEPPRDAEFRPTITELPRPIFAYNYEVVDNRPG
                     DGDGELELGEGVTIYLNVKNVGKGPSYETQANLRNVSGDGLLLHAGRFDISNMKPGEG
                     RNVAFTFDVLESLAEPTANLEISVTDRDLRVGASEKPKFPIAKTPLAIRPANGLMSVP
                     AVAAVRGQPLASAPVVGQLAKGSLVERLGVYQDYTKVSLGDSRFGFVESRALKEGATG
                     TAKPQFDPVFSHSPPLLEVAPASLSTRDHKVHVAGHATDSDRVKDVFVFVGPRKVFYQ
                     SNGKAPDPKRLDFAFDAELQPGVNVITVVARENEDTVERRTMIVRRDGPNGESLPTPK
                     AETLGEDWDLGAGGD"
     gene            complement(5529..>6788)
                     /locus_tag="VLJ38_18510"
     CDS             complement(5529..>6788)
                     /locus_tag="VLJ38_18510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSU41580.1"
                     /translation="RVTGRIRGYRREHVTPRAGRARVRRSMRRSREYKVGAFVLAGMM
                     AIGGVIFMIGEERQLFKKKLEYESSFMDVQGLGAGSSVRMGGVDIGRITKVGYTGDKE
                     DRRIHVKMSILSDQWPRIKVDSVAAIEGKGLLGDKMLVISIGSPDKASLPPGGHIASK
                     EGADFASMMDKFSGLPAKIDNVLGNLEKVTDTLADDSLHKDLKGAVSSLNSVLGAVER
                     REGYVGRIMSDPKEAEHISQVVSNLERVTDELDRTAQGVNQVLGRVKTGPGLAHEVIY
                     GEDSSKAVAQFGGAAEELRITLKGIREGNGVAKSLIYGDDQSQQLMQNLNAMSGDVRQ
                     IVADMRAGKGTLGALLVDPSIYEDIKVVLGNVDRNRTLRALVRYSIRRDETTTGVHDN
                     VAVKPGPRATDTSVSDGLAGEPGPTTP"
BASE COUNT         1048 a         2349 c         2228 g         1163 t
ORIGIN      
        1 gagcaggagc tccgtcgcgc cgtggccggc gttttccatc agttcgagcg acggcaccga
       61 ggcttcggcc gttgcgcggc ggtcgagctc gcgcacctcg gcgcgcgtga gcacgggctt
      121 catgcggcag aacctcgcgg ccgcgccgcc acgccccgct ccatggccgc gcgcatgtcg
      181 cgcaccgctc gctcgagccc cacgagcacg gcgtcgccga tcacggcgtg cccgatattg
      241 agctcctcga tttccgcgat cgccgtgatg gggccgacgt tcgcgcgcgt gagcccgtgg
      301 cccgccgcca cctcgaggcc caattgctgc gcgagccgtg cgccgcgagc gagccgggac
      361 aacgcttcgg cgcgcgcggc gccgtgcgcg tgagcgtact cgccggtgtg cagctcgatt
      421 tgttgcgcgc cgagctcgcg actcgcctcg atttgctgcg agtcgggagc gatgaacagg
      481 ctcagcttga tgccggaagc tgccgcgcgc tttgcgactt tttcgaccgc gcggcgcgtc
      541 gcgagcacgt cgagtccccc ctccgtcgtg agctcttcgc gccgctcggg cacgagcgtg
      601 atcacgtcgg ggcggatgcg ctcggcgatg gcgagcatct cgtccgtggc ggccatctcc
      661 aaattcaaga cggtcgtgag cgcggcgcgc agccgctcga tgtcgccgtc caacatgtgg
      721 cgccgatcct cgcgcaggtg ggcggtgatg ccgtcggcgc ccgcgagctc acacagcccg
      781 gccgcgagaa tcggatccgg atacagggtc ttacgggcat tgcgcagcgt ggcgacgtga
      841 tcgatattga tgtggaggcg gaccatgggg ctcggagcgt acgacttacc ctcacgccgt
      901 tccaagggac agcgccgaac gcgcggctgg gccagacgct acctacggcc ccgcgccggt
      961 tccgggcgcc gggcctccgc gtcgaccgcg cgcgacggat cgtccacact cggcccgatg
     1021 ccgaggacca gcggcaaggc gcgcaccgcg ccgggctctg aacgctgatg ccgggcgcac
     1081 cgagcgatca aaagccgccg cgccgtgcgc gccccggccg aaaactcgcg ctcgcgatgc
     1141 tcgtcgcggc cgtagtcggt gcggctttgg cgatcacgcc gcgcgcacgg aagtcaccgc
     1201 gcgtttccgg gccacccgcg ggagcgcagc gccccgggcc acgcgcagtc ccgagcgagc
     1261 cggacgcgac gcccacagac gcgaccacgc ccgaagacgc cgccgccgag gcggccgctc
     1321 cgacgtcctc cgcggaaccg tacgtcgagc tcgacggcgg cacgctgcgc gagcgcaatg
     1381 acgtgctcat caccaacatg caacacgtgc tcgggttgag cgacgcgcag gtcgcggccg
     1441 tgcgcgcggt cttcgccggc tcggagtaca tcggccaagg caatccggcc gtgtcgcaac
     1501 acccgctctc gcgcgccgac tgcctcgcgc ggcgcgtcca ggcgtcgaac ctgcccgcgc
     1561 ccgacctgcg ttgcggcgcc cccaacatgg tgccgctcta tgatccgagc gccggcgaaa
     1621 ctccggccca ggccaaagtc tgcatcgacc agtacgaatt cccgaacatc gagtgcgagt
     1681 tcccggtcgt gtgggtccgc gcgaacgagg cgcagacgct ctgccacgcg ctcggcaagc
     1741 ggctctgcga cgcgcacgag tgggagggtg cgtgcgcggg cgccgtcaaa gctcccgagg
     1801 ccgaataccg cttcaacgac cgccgcatcg ccgaccagta tttccacaac aagagtcgtg
     1861 aaatcgtgtg ggcgtacggc aaggaaaaga accacgcgct ctgcgccacc ggctcgaaga
     1921 agggaccgaa gtgccccacc cccagctgga gcggctgcgg tacgaacgac taccccgcag
     1981 gttcatttcc cgcttgcgtg agcccgctcg gcgtcttcga tctgcacggc aacgcggccg
     2041 agcacatgaa cttcccgcgc acgccggaag agctcggcag tcgcggcggc tcgggcgaga
     2101 cggagatgaa gggcagctgg ttcatcttct tacaagcgga agcgcatgag gacgactgtc
     2161 gctggcgcgc gcccgattgg cacgtcacca aaatcgacga ccccaacagc caccgcaatt
     2221 atcacctcgg ttttcgctgt tgccgcgacc tcgaagcgcc ggacgcgtcc acgccgcacg
     2281 acgcgtccac gccgcaggac gcgtccacgc cgcagggcgc gtccacgccg cagggcgcgt
     2341 ccacggacgc gcagtgactc tcagtcgccg ccggcgccga gatcccagtc ttcacccagc
     2401 gtttcggcct tgggcgtcgg gagggactcg ccgttcggcc cgtcgcgccg cacgatcatg
     2461 gtccgtcgct ccaccgtgtc ctcgttctcg cgcgcgacga ccgtgatgac gttcacgccc
     2521 ggctggagct cggcgtcgaa cgcgaaatcg agacgcttcg gatccggggc cttgccgttc
     2581 gactggtaga acaccttgcg cggcccgacg aagacgaaca cgtccttcac gcgatcgctg
     2641 tccgtcgcgt gtccggccac gtgcaccttg tggtcgcgcg tcgagagact cgcgggcgcg
     2701 acctcgagca gcggcggcga gtgactgaac accggatcga actgcggctt cgccgtgccc
     2761 gtcgcgcctt ccttgagcgc gcgtgactcg acgaacccga agcgggagtc gccgaggctc
     2821 accttggtgt agtcctggta caccccgagc cgctcgacga gcgagccctt ggcgagctgc
     2881 ccgacgacgg gagcgctcgc gagcggctgt ccgcgcacgg cggcgacggc cgggacgctc
     2941 atcaagccgt tagcggggcg aatcgcgagc ggggtcttgg cgatggggaa tttcggtttt
     3001 tcgctcgcgc cgacgcgcaa gtcgcgatcg gtgacgctga tctcgaggtt ggccgtcggc
     3061 tccgccagcg actcgagcac gtcgaacgta aaggcgacgt tgcggccttc gcccggcttc
     3121 atattcgaga tgtcgaaacg accggcgtgg agcaagagcc cgtcgccgga cacgttgcgc
     3181 aggttcgcct gcgtctcgta ggacggcccc ttaccgacgt tcttcacgtt caggtagatg
     3241 gtgacgccct cgccaagctc gagctcgccg tcaccgtcgc cgggacggtt gtcgacgacc
     3301 tcgtagttgt aggcgaagat cggccgcggc agctccgtga tggtcgggcg gaactcggcg
     3361 tcgcgcggcg gttcggcgcc ctcggccgag aactgcacgc gcacgatgtc ctgccgcgtg
     3421 ttggcgtcct tcggaatctt gcagacgcgc ttggcgtctt cgggcacggg cttggtggag
     3481 ccgggcttgc gcccgtcgag atcgcaaaag ccgagcggca cgttggccgt gcgcgtctcg
     3541 cccggttgaa tgcggccgaa cgcgagctcc ttctcgtccc agtacggccc gtcgctcttc
     3601 gtaacggcgc gaagctggta aatcggcgcc ttacccttgt tcttcaccga caccgtgagc
     3661 gtcaacccat cgccggcgac gatcgtgtcg ttcgggcgat cggtcgtgac cttcacgtcg
     3721 tagtcgttcg ccgtcggacc cgtggcgtcc ttgggcggcg ccgtccaatc gataccgagc
     3781 ttggcgagat cggcgctgag cgcctcgacc tccgtatcct gcagcttgtc gaggtactgc
     3841 ttggcgccgc gcacctgctc cggtcgccgc ccgggcgaga gcttcgccac gaggccttgc
     3901 gccatcttga tcggaaaatc gagctcgaac tcgtcgtcga gatcgtcgcc gcgatcgcgg
     3961 atcgccgcgc gcgtcttctc gggcagatcg tagcgcagcg tgaacgccgg gcgatcgctc
     4021 gtgcggtgcg ccgtcgtgtt caggctcttc gtgaggtccc gctcgcggag cgaacgttcc
     4081 gagcggaaca gatccatgtc cacggtatcg gccgtcatcg gatcgagctc cacgtccggc
     4141 gtcacgccca cgccctggat cgagtaatcg ccgggcgtga ggtactgcgc gatcgtgagc
     4201 ttgagcgccg cgttgtccgg cgtgacgtgc ggataaacga gctgcaagct gcccttgccg
     4261 aacgtcgtct gtcctacgat cacggcgcga tcgaggttct tgagcgcgcc cgcgacgatc
     4321 tcgctcgcgc tcgcgctcgc tccgttcacg agcacgacaa tcgggtacgg cggctccgtg
     4381 ccggcccgca cggcgcgctt ctcgtcgcgg ccttcggacg cacccaccgt cgcgacgatc
     4441 acgccctcgt cgaggaagcg gtcggccacc tgcgcggcct gatcgagcaa gccgcccggg
     4501 ttgctgcgta gatcgagcac gaggcccttg agcttgtcct ttttgtggaa gtcggtgagc
     4561 gccgcgtcga gctcgtcgga ggtgctcgag acgaactgct tgatgcgcac gtagccgata
     4621 cccggctgca gctggcgcgc ctccacggat ttgacctgga tctcctcgcg caagagctcg
     4681 aacggacgcg aaccctgcca gccgtccgac ccgtcgcgct ggatccaaat cgtcaccttc
     4741 gagcccggct tgccgcgcaa gcgctgcacg gcgtcgtcga gcggcatgtt caaggtggat
     4801 tcattgttga tcttcgtgat gcgatcgagc ttcttgatgc cggaacggcc cgcgggagtg
     4861 ccgggcatcg gcttcatcac cgtcagcatc tgatcgcgaa tcgagatgac gataccgagc
     4921 ccgccgaagt gccccgaggt cgagatgttc atctcgcggt aggcgtcggg gctcaagaac
     4981 acgctgtgcg gatcgagcgt gcggagcatg ccgttgcacg ccgcgtactc gacctcgcgc
     5041 aagtcgacgc ccgtgtcctt gaggtgcgcc tgcaagaacg agaacacttc gcgcaagcgc
     5101 gccgccacgt cccacggccc ctgcacgttg tcgacgcgga agtccttcga atcggcgtcg
     5161 acctgcaccc acactttgga tgtcttgtcg tcgtaacgga tgatgacctg cgcgacctct
     5221 ttttggattt ggttgagcgc gctcaggaac atctgccgcg gcttcacgcg cgacggatcg
     5281 acgtacttgt tgcgaatcgt gttgagcgtt tcgcgcacgg cgacgagctg agtgagatcg
     5341 taaggagcgt tcggctgacc cggcgccgca gcgacgtgag cggcggcaag accgcgccag
     5401 agaccgcccg tgtcgaagcg cacggcgaag taggaggcga cggcgaagac accgaggacg
     5461 acgacgactc gaccgagtcg ctcgagagcg cgcaacatca cgcgatccta gcttactttt
     5521 ccgaagcgtc agggcgtagt cgggcctggc tcaccggcca gaccgtcgct cacggacgtg
     5581 tccgtggcgc gcggccccgg cttcacggcg acgttgtcgt gcacgccggt cgtggtctcg
     5641 tcgcgcctga tcgagtaccg aacgagcgcc cgcagggttc tattccggtc gacgttcccg
     5701 agcacgacct tgatgtcctc gtaaatcgag ggatccacga gcaaggcgcc tagcgtgccc
     5761 ttgccggcgc gcatgtcggc gacgatttga cgcacgtcgc cgctcatggc gttcaggttc
     5821 tgcatcagct gctgggactg atcgtcgccg tagatcaggc tcttggcgac gccgttaccc
     5881 tcgcggatgc ccttcagcgt gatgcgcagc tcctcggcgg cgccgccgaa ctgcgcgacg
     5941 gccttgctcg agtcttcgcc gtagatgacc tcgtgcgcca gccccggccc ggtcttgacg
     6001 cgtccgagca cctgattgac accctgcgcc gtgcgatcga gctcgtccgt cacgcgctcc
     6061 aggttcgata ccacctgcga gatgtgctcg gcttccttgg ggtcgctcat gatgcgcccg
     6121 acgtagccct cgcgccgttc caccgccccg agcaccgagt tcaaggacga gacggcaccc
     6181 ttcaaatcct tgtgcagcga gtcgtccgcc agcgtgtcgg tcaccttttc gaggttaccg
     6241 agcacgttgt ctattttcgc cggtaagccc gagaacttgt ccatcatcga cgcgaaatcg
     6301 gcgccttctt tggaggcgat gtggccgccg ggcggcaggc tcgccttgtc gggcgagccg
     6361 atgctgatga cgagcatctt gtcgccgagc aggcccttgc cctcgatggc cgccacgctg
     6421 tcgactttga tgcgcggcca ctggtcggac aggatcgaca tcttgacgtg gatgcgccga
     6481 tcctctttgt cgccggtgta gccgaccttc gtgatgcggc cgatgtcgac gccgcccatg
     6541 cgcacggagg agcccgcgcc gagcccctgc acatccatga acgacgactc gtactcgagc
     6601 ttctttttga agagctggcg ctcttcaccg atcatgaaga tgacgccacc aatcgccatc
     6661 atgccggcga gcacgaacgc gccgaccttg tattcgcggc ttctccgcat acttcgccta
     6721 actctggcgc gtccggcccg cggcgtcacg tgctctcgtc ggtagccgcg gatccggccc
     6781 gtaacccg
//
LOCUS       DATIML010001076         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2246318, whole genome shotgun sequence.
ACCESSION   DATIML010001076 DATIML010000000
VERSION     DATIML010001076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2246318"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..1282)
                     /locus_tag="VLJ38_18515"
     CDS             complement(158..1282)
                     /locus_tag="VLJ38_18515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41581.1"
                     /translation="MALPDVDLSALPVPAQKALAPEAPAPLRTMAARGVLPGLKPGDI
                     VIVVSVLASSADAAIAQTARTTLEKLPTPVLAGALTADLPGSVIEKLAEARPREATVV
                     LALLKMPRVTTAALEHLAAAADEPTGEIIATNEELMLAHPTVIEKLYMNKQVRMSTAD
                     RLIELAVRNGIELGIPAFKEAAAAIMNELIPEPSEEPTFDDLHFKQVEEIAAQVALED
                     GEDTHEVDEEGEEQVKKKVLPLHAEIAACSVSEKIRRATLGTSTERLLLVRDSNRLVA
                     AAAAKSPGLRESEAVQISASRAVSDEVLRIIAMNRDLVRSYQVKMNLVQNPRTPFTFA
                     SRLVPHLRDSDLRALARSKNVSAAVAQIVQQQISRKQKAG"
     gene            1369..>2032
                     /locus_tag="VLJ38_18520"
     CDS             1369..>2032
                     /locus_tag="VLJ38_18520"
                     /inference="COORDINATES: protein motif:HMM:NF024813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSU41582.1"
                     /translation="MGIVDFVKGGVQRMMIARPDAQKDKLVYKHPDQTFPFWSQLTVD
                     ADECALFFRDGNVVATLPPGRHTLQTQNYPFLNNLVDRFTGGNVFISEIYFVLTRPLY
                     NQGFGDTIGSMRDPELEIRVTPRAFGTFSYRVYDPLRFLVWFRGQAAGDANDSPRWIQ
                     DMLFMGLRATLTRLLKAGELSLLDLGTCGPEVARAMVQSCPDLQNIGVQVLEVAKLNV
                     NLS"
BASE COUNT          310 a          689 c          657 g          376 t
ORIGIN      
        1 catgacgccg ttcctcgtcg atcccgagaa ggtgaagcaa gccgccgaag ttcgcgccgc
       61 tcgcctcgcg gcgcgcgaga agaaggatca cgccgcgcac atcgtggttc acgacgaata
      121 gcgcggctgc gcgcgcgagc acgtggccgc gcgaacctca gccggccttc tgtttgcgcg
      181 agatttgctg ctgcacgatc tgggcgaccg cggcgctcac gttcttgctg cgcgcgagcg
      241 cgcgcagatc cgagtcacgc aggtgcggca cgagtcggct cgcgaacgtg aacggcgtcc
      301 tggggttctg cacgaggttc atcttcacct gatagctccg cacgaggtcc cgattcatcg
      361 cgatgatgcg gagcacctcg tccgagacgg cgcggctcgc gctgatctgc acggcctcgc
      421 tctccctgag gccggggctc ttcgccgcgg cggccgcgac caagcgattg gagtcgcgca
      481 cgagcaagag tcgctccgtc gatgtgccga gcgtcgcgcg ccggatcttt tcgctcaccg
      541 agcaggccgc gatctcggcg tggagcggca ggaccttctt tttgacctgt tcttcgccct
      601 cctcgtcgac ctcgtgcgtg tcctcgccat cctcgagcgc cacctgcgcg gcgatctctt
      661 cgacttgctt gaaatggaga tcgtcgaagg tcggctcttc cgacggctcg gggatgagct
      721 cgttcatgat ggcggccgcg gcttctttga acgcggggat cccgagctcg atgccgttgc
      781 gcaccgcgag ctcgatcaag cgatcggcgg tcgacatgcg cacttgcttg ttcatgtaga
      841 gcttctcgat caccgtcggg tgcgcgagca tgagctcttc gttcgtggcg atgatctcgc
      901 ccgtcggttc gtcggcggcg gcggcgaggt gctcgagcgc cgcggtcgtg acgcgcggca
      961 tcttgagcag ggcgagcacg acggtcgctt cgcgcggccg ggcctccgcg agcttttcga
     1021 tcacggaccc cggcaggtcg gccgtgagcg cgcctgcgag cacgggcgtc ggcagctttt
     1081 cgagcgtcgt gcgcgccgtc tgcgcgatgg ccgcgtccgc cgagctcgcg agcacgctca
     1141 cgacgatcac gatgtcgccg ggcttcaggc ccggcagcac tccgcgcgcc gccatggtgc
     1201 ggagcggcgc gggagcttcc ggcgccaagg ccttttgagc gggcaccggc agcgcgctca
     1261 agtcgacgtc gggtagagcc aagagcctcc ccgctagtat cccaaaactt agagcggcgt
     1321 cgaccggcct tgcgacccta ggccaatccg cctaatttcg cgggcagcat gggcatcgtg
     1381 gacttcgtca agggcggcgt gcagcgcatg atgatcgcgc ggcccgacgc gcaaaaagac
     1441 aagctcgtct acaagcaccc cgatcagacg ttcccgtttt ggagtcagct cacggtcgac
     1501 gccgacgagt gcgcgctctt ctttcgtgac ggcaatgtcg tcgccacgct gccgcccggg
     1561 cgccacacgc tgcagacgca gaactatccg ttcctgaaca acctcgtcga caggttcacg
     1621 ggcgggaacg tcttcatcag cgagatctat ttcgtcctca cgcgcccgct ctataaccaa
     1681 ggcttcggcg acaccatcgg ctcgatgcgc gatcccgagc tcgagatccg cgtgacgccc
     1741 cgcgccttcg gcaccttctc gtaccgcgtg tacgatccgt tgcgcttttt ggtttggttt
     1801 cgcggccagg ctgcgggcga cgcgaacgac tcgccgcgct ggatccaaga catgctgttc
     1861 atgggcctcc gcgcgacgct cacgcggctg ctcaaagcgg gcgagctcag cctgctcgat
     1921 ctcggcacct gtggacccga ggtcgcgcgc gccatggtgc aaagctgtcc cgatctgcag
     1981 aacatcggcg tccaagtgct cgaggtcgcc aagctcaacg tcaatctttc cg
//
LOCUS       DATIML010001077         3824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3114896, whole genome shotgun sequence.
ACCESSION   DATIML010001077 DATIML010000000
VERSION     DATIML010001077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3824
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3114896"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2548)
                     /locus_tag="VLJ38_18525"
     CDS             complement(<1..2548)
                     /locus_tag="VLJ38_18525"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU41583.1"
                     /translation="MQWLARLCVQRPVLASVLMLVILVLGTVGYRGLGVDQFPNVDVP
                     VVVITTQLPGAAPEEIETDVTDKIEGAVNQISGVDDLNSVSSEGVSQVVIMFKLDKDT
                     DVAAQEVRDKVNTVLRELPTGIEQPIISKVEPSAAPVLYLGVRGKAHSLRDLTEVADK
                     KVRRQLETILGVGKVTIIGGRERQIHVRMDPLALRSAGITAVDVMNTLQSQNLMTPGG
                     NLETGPESVTLRIDGRVTSVEAVGRLVVRAKDGRILRLSDVANVVDDQEAVESLARYD
                     GKEVVVLSIVKQAGTNTIEVVDNIKKRIQSLQKSLPDGMELTVIRDNSQTIRTSVHSV
                     IEHLIVGALLAAAVVLLFLGNARSTLIAAISIPISVIGAFGLMWLQGYTLNNITLLAL
                     ALAVGIVIDDAIVVLENIIRFIDEKKMKPFPAAVLATKEIGFAVLATTLSLMAVFIPV
                     AFIGGIPGRFLKSFGYTMAFSIGVSLLVSFSLTPMLSARLLLAHGHGGRLSRVVDFFY
                     RPIERVYLAMLRFSLQNRWVVVLACAGVMGSCIPVAKSLPGSFLPLDDKAKFQVTMRA
                     PEGTSAEETLLIADRASGLLRRLPGVTHILITVAEDDQLTRNYAQLYVDLVDPGQRKE
                     TQFQLMDRARELVLPNMPKDLRINIAEVPDFSVGSNTQGVQYILSGPNFGELERGAGV
                     ITKALNQSGKAVDVDTTNIPGRPEVRVTIDRDRAADLGVSVANVASTLQMLVAGVKAS
                     TFPENGNEYEIRIRADEQYRTDQNALALMSVPSSKYGSVPLSAVVRWDRGLGPSRINR
                     YARERQITILANAAANAGDNDVSAVIQKEFKKLELGPGYQLRATGRSKSQE"
     gene            complement(2598..3689)
                     /locus_tag="VLJ38_18530"
     CDS             complement(2598..3689)
                     /locus_tag="VLJ38_18530"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU41584.1"
                     /translation="MSNPLRRSRSFSRFALAATLALAVLPSACKPKTDAAKQAPPAPP
                     VAVTTDAVTNIDVPRSLRLTGTLRGERETDLAANVAGRVTSIKFERGQRIAKGELIAE
                     VDVSAAALALKEARLAVETSKTQEAINQTDCARYEKLKASGAVTDIEYDQVTAKCKTA
                     PLNRETAEARQNMAAKNVGDGRIRSPFAGIVTDKYVQVGEYVQPSSRVVSLAQVSDLR
                     LEFSLPEQNYPDVKAGEAVTFRVGAYGKEPFTGTVSYIAGAVRETRDVLVEASVKNPD
                     QRLLPGMFADVELTVGQDNLPSVPKSAVFEANGKLNVLAVKDGVLEQRVLQPGPELGA
                     RLSVRRGVVANERVVAPYVPDLQNGQRVK"
BASE COUNT          607 a         1217 c         1310 g          690 t
ORIGIN      
        1 cttcttgtga tttcgagcgt cccgtcgcgc gcagctggta gccggggccg agctcgagct
       61 tcttgaactc tttttgaatg acggcgctca cgtcgttgtc acccgcgttc gccgcggcgt
      121 tcgccaaaat cgtgatctgg cgctcgcggg cgtagcggtt gatgcgcgat ggcccgagcc
      181 cgcggtccca gcgcacgacg gcgctcaaag gcacgctgcc gtacttcgac gagggtacgc
      241 tcatgagcgc gagcgcgttt tggtcggttc ggtactgctc gtcggcgcgg atgcggatct
      301 cgtattcgtt gccgttttcg gggaaggtcg aggctttgac gccggcgacg agcatctgca
      361 gcgtcgaggc cacgttggcg acactgacgc cgaggtcggc ggcgcggtca cgatcgatcg
      421 tgacgcgcac ctcgggccgg ccgggaatgt tcgtcgtatc gacgtcgacc gctttgccgc
      481 tttggttcaa ggctttggtg atgacgccgg cgccccgctc gagctcgccg aaattcggcc
      541 ccgagaggat gtactggacc ccctgggtgt tggagccgac ggagaagtcc ggcacctccg
      601 cgatgttgat ccgcagatcc ttcggcatgt tcgggagcac gagctcgcgc gcgcggtcca
      661 tcaactgaaa ctgcgtctcc ttgcgctggc ccggatcgac gagatcgacg tagagctgcg
      721 cgtaattgcg cgtgagctgg tcgtcttcgg ccacggtgat gaggatgtgg gtgacgccgg
      781 gcaggcgccg taagagaccg ctcgcgcgat cggcgatgag cagcgtctcc tccgcgctcg
      841 tgccctccgg cgcgcgcatg gtgacctgga atttcgcctt gtcgtcgagc ggcaggaacg
      901 agccgggcag cgatttcgcg acggggatgc aggagcccat cacgccggcg cacgcgagca
      961 cgaccaccca gcggttctgc agcgaaaagc gcagcatggc gagatacacg cgctcgatcg
     1021 gccggtagaa gaagtccacg acgcggctca gccgcccgcc gtgcccgtgc gcgagcagga
     1081 gacgcgccga gagcatcggc gtgagcgaga agctcacgag cagcgacacg ccgatcgaga
     1141 acgccatcgt gtagccgaag ctcttcaaga agcgccccgg gatgccgccg atgaacgcga
     1201 cggggatgaa caccgccatc aaagacagcg tcgtcgcgag cacggcgaag ccgatctcct
     1261 tggtcgcgag cacggcggcg gggaacggct tcatcttctt ttcgtcgatg aagcgaatga
     1321 tgttctcgag cacgacgatg gcgtcgtcga tcacgatgcc caccgcgagc gccagcgcga
     1381 gcaacgtgat gttgttcagc gtgtagcctt gcagccacat caggccgaac gcaccgatca
     1441 cggagatcgg gatcgagatt gcggcgatca gcgtgctgcg cgcgttgccg aggaacagga
     1501 gcacgacggc agcggcgagc agcgcgccca cgatcaaatg ctcgatcacg gagtggacgc
     1561 tcgtgcggat cgtctgcgag ttgtcgcgga tgacggtgag ctccatgccg tcgggcagcg
     1621 atttttgcag gctctggatg cgcttcttga tgttgtcgac gacttcgatc gtgttcgtgc
     1681 cggcttgctt cacgatcgag agcacgacga cttccttgcc gtcgtagcgg gcgaggctct
     1741 cgacggcttc ctgatcgtcc acgacgttcg ccacgtccga gagccgcaag atgcgcccgt
     1801 ccttggcgcg cacgacgagc cggcccacgg cttcgaccga ggtcacccgg ccgtcgatgc
     1861 gcagcgtgac gctctcgggg ccggtctcga ggttaccgcc cggcgtcatc aggttctgcg
     1921 actgcagcgt gttcatcacg tcgaccgccg tgatgccggc cgagcgcagc gcgagcggat
     1981 ccatgcgcac gtggatctgt cgctcgcggc cgccgatgat cgtcaccttg ccgacgccga
     2041 gaatggtctc gagttgccgg cgcaccttct tgtcggcgac ctccgtgagg tcgcgcaagc
     2101 tgtgcgcttt gccgcgcacg ccgaggtaga gcacgggcgc ggcgctcggc tcgaccttgc
     2161 tgatgatggg ttgttcgatg cccgtcggca gctcgcgtaa aacggtgttc accttgtcgc
     2221 gcacctcttg cgccgcgacg tcggtgtcct tgtcgagctt gaacatgatc acgacctgcg
     2281 agacgccctc gctcgagacc gagttcaagt cgtcgacgcc cgagatctgg ttgacggcgc
     2341 cctcgatctt gtcggtgacg tccgtctcga tttcctcggg cgcggcgccc ggcagctgcg
     2401 tcgtgatgac gaccacgggc acgtcgacgt tcgggaattg gtcgacgccg aggccgcggt
     2461 agccgaccgt gcccaacacc aaaatcacga gcatcaagac cgatgcgagc accggccgtt
     2521 gcacgcacaa tcgggctaac cattgcatgg gcggcttcct ctcggcttcc tgtcgctctc
     2581 gagctgcgcg aaagcggtca tttgacgcgc tgcccgtttt gcaaatcggg aacgtacggc
     2641 gccaccacgc gctcgttcgc gacgaccccg cgccggaccg acaggcgcgc gccgagctcc
     2701 ggtcccggct ggagcactcg ttgttcgagc accccgtcct tgacggccaa gacgttcagc
     2761 ttgccgttgg cctcgaacac ggcgctcttc ggcacggagg gcagattgtc ctgcccgacg
     2821 gtgagctcga cgtcggcgaa catgccgggc aagagtcgtt ggtcgggatt tttcacgctc
     2881 gcctcgacca gcacgtcgcg cgtctcgcgc acggcgcccg cgatgtagga gacggtgccc
     2941 gtgaagggct ccttgccgta ggcgccgacg cgaaaggtga cggcctctcc cgccttcacg
     3001 tccgggtaat tctgctcggg caagctgaac tcgaggcgca gatccgacac ttgcgcgagc
     3061 gaaacgacgc gtgacgaagg ttggacgtac tcgcccacct gcacgtactt gtccgtgacg
     3121 atgccggcga acggcgagcg gatgcgaccg tcgccgacgt tcttcgccgc catgttctgg
     3181 cgcgcttccg ccgtctcgcg attgagcggg gccgtcttgc acttggcggt gacttggtcg
     3241 tactcgatgt cggtgacggc gccgctcgcc ttgagctttt cgtagcgcgc gcagtccgtt
     3301 tggttgatgg cctcctgggt cttcgacgtt tcgaccgcca agcgcgcctc tttgagcgcc
     3361 agggccgcag cgctcacgtc gacctcggcg atgagctcgc ccttggcgat gcgctgcccg
     3421 cgctcgaact tgatgctcgt gacgcggccc gcgacgttgg cggcgaggtc cgtctcgcgc
     3481 tcgccacgca gcgtccccgt gagccgcagc gagcgcggca cgtcgatgtt cgtcacggcg
     3541 tcggtggtga cggcgaccgg cggagccggg ggggcctgct tcgccgcgtc ggtcttgggc
     3601 ttgcacgcgc tcggcaacac tgcgagcgcg agcgtggcag cgagcgcgaa gcgggaaaaa
     3661 gaacgggagc gacgaagagg attcgacatg gtcgtggatc gcaacgagta aacggcttag
     3721 cgggaggtag gattagtggc gggttccgcc gggggcgaaa gggggagcgc cggcggcgcg
     3781 ccgaggtctt tggcttggac ggggggagac gacgaggcct gcac
//
LOCUS       DATIML010001078         2385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1965148, whole genome shotgun sequence.
ACCESSION   DATIML010001078 DATIML010000000
VERSION     DATIML010001078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1965148"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VLJ38_18535"
     CDS             complement(<1..513)
                     /locus_tag="VLJ38_18535"
                     /inference="COORDINATES: protein motif:HMM:TIGR00633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HSU41585.1"
                     /translation="MRLATWNVNSLNARIEKVFWWLERAAPDVLLMQETKLTDEDAPH
                     EEFGRLGYELAHHGQGRWNGVAIASRIGIGDVITNFGLPLAPERTTEGDDEPDAEARM
                     IAALCGGVRVVSLYAPNGRTLDSIFYQAKLAWFERLERWCRGRAGTSEAMALGGDFNV
                     APTDADVWDPK"
     gene            1129..1779
                     /locus_tag="VLJ38_18540"
     CDS             1129..1779
                     /locus_tag="VLJ38_18540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41586.1"
                     /translation="MSTLRMGLSILVASAMAATACGGEDTVTGGGTGESETGGAAGRA
                     VAGAGNPFTSTGGTGTGGTFGAGGSGTGGTFGSGGSGAQPMGAGGTESGGSGRGGRGL
                     AGEFGAGGREVAGGGREGRGTGGREAGLGGRGTSTGGREGGIGGRETRGAGGRDARGT
                     GGREAGLGGREGRGTGGREAGLGGREGRGTGGREAGLGGREGRGIGGREAGLGGRG"
     gene            1923..>2385
                     /locus_tag="VLJ38_18545"
     CDS             1923..>2385
                     /locus_tag="VLJ38_18545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41587.1"
                     /translation="MNEDDLSGWLSWHGASSSSEPAATEPAGRALALECDAGKATPFE
                     LGTLWEKLTAGEWRVRETFTERERLYVVVEEPLYRKTRRRRRRGLAMMERVLLGERAK
                     VIAIESSVTESTVAVAIKGQLRSMGLECKVRATPLILVMAARAARSSRCRAV"
BASE COUNT          382 a          744 c          885 g          374 t
ORIGIN      
        1 tttgggatcc cacacgtcgg catccgtggg cgccacgttg aagtccccgc cgagcgccat
       61 ggcttcgctc gtccccgccc gtccgcggca ccagcgctcg agccgctcga accacgcgag
      121 ctttgcctga taaaaaatcg aatcgagcgt ccgcccgttc ggcgcgtata aactgacgac
      181 ccgcaccccg ccgcacagcg ccgcgatcat gcgcgcttcg gcgtccggct cgtcatcacc
      241 ctccgtggtc cgctcgggcg cgagcggcag cccgaaattc gtgatcacgt caccgatgcc
      301 gatccgactc gcgatcgcga cgccgttcca gcgcccttgc ccatggtgcg ccagttcgta
      361 accgagccgc ccgaactcct cgtgcggcgc gtcctcatcg gtgagcttcg tctcctgcat
      421 caagagcacg tcgggcgcgg ctcgttcgag ccaccaaaac accttctcga tgcgagcgtt
      481 cagggaattg acgttccagg tcgcgaggcg catggctacg gccctgccga tatcacatcg
      541 gcagcgacgg cacgacggcg ccgagagcgg ggcggccaga gccgcatcgc cgtcgcctca
      601 gccggtcccg tccgcgcgag tcgcgccaag catcgctgct tgctgcgcga gagcgggtga
      661 cgtcgaaagt aaccgcgacg cctcgggcac atcgctgcgg ctcgatcaac ttggaaacga
      721 gctcggcccg ggtggacacg cctagtgcac tgccgagctt gcgagtcaag gcgcgtggac
      781 cgtcttgcgc gctgtccgga actggcatgc tgaaagttga cgctccgact gcttcgaaaa
      841 ctctgttcgg agtcgcgcgc gcatttcgaa gctaatttgc gaagcgagct tgaaccttct
      901 ttgagcttgt cgagcgcgcg ccagcgcaac gtcgtccctt tgctcgcgta cgttgcgttc
      961 ggagcgcgaa ctccgattca cgacgttgcc gtgcggggga ggacggttgc ttggtgcgaa
     1021 tgatgcatcg agttcgcgac cggcgacttg cgacttttgc ggtctccgag aactgaccac
     1081 catcaggccg tctgcgctca ggcgcgacag tcaaaaggga tttttccgat gagcacactt
     1141 cgaatggggc tgagcattct cgtggcaagt gcgatggcag caactgcttg cgggggcgag
     1201 gacaccgtga cgggcggcgg taccggtgaa tccgagacgg gcggcgctgc agggcgcgcg
     1261 gtggcaggtg ctgggaatcc gttcacgagc acgggcggca cggggaccgg cggtacgttt
     1321 ggcgccggag gttcgggcac gggcggcacg ttcggatccg gaggaagcgg agcgcaaccc
     1381 atgggagcgg gcggaacgga gtcgggcggt tcagggcgcg gaggacgcgg attggccggc
     1441 gagttcggcg cgggtggtcg tgaagtggcc gggggcgggc gcgaaggtcg aggcaccggc
     1501 ggccgcgaag ccggactcgg tgggcgcggg acaagtacgg gcggacgcga gggcggcatc
     1561 gggggtcgcg agactcgcgg agccggtggg cgcgacgcgc gcgggacggg tggacgtgaa
     1621 gccggtctcg gcgggcgcga gggtcgcggg acgggcggac gcgaagccgg actcggcgga
     1681 cgggaagggc gcgggacggg tggacgcgaa gccggactcg gcgggcgcga aggccgcggc
     1741 atcggcggac gcgaagccgg actcggcggg cgtggttagc cgccgcttcg cgtagcccaa
     1801 tttgcgacaa cgtaccgggc acgacgtcag atcaccggtt ccgcgaggtg aggtcgttca
     1861 cctcgacgcc agagcgcgtg cgctgctcgt gtgagcaggc cggagccttg aggtgaggcg
     1921 tcatgaacga ggatgatctg agtggttggc tgagctggca cggcgcgagc tcctcatccg
     1981 aaccagccgc gaccgagccg gccggtcggg cccttgctct cgagtgcgat gcggggaagg
     2041 cgacgccttt cgagctcggc acactgtggg aaaagctcac cgcgggcgag tggcgggtgc
     2101 gcgagacgtt cactgagcga gagcgcttgt atgtcgtggt cgaggagccg ctttatcgca
     2161 agacgcgccg gcgccgccgc cgtgggctcg cgatgatgga gcgcgtgctg ctcggcgagc
     2221 gcgccaaagt catcgccatc gagagctcgg tcaccgagtc gacggttgcc gtggcgatca
     2281 aggggcagct gcgcagcatg ggactcgagt gcaaagtgcg cgcgacgccg ctcattctcg
     2341 tcatggcggc gcgcgcggcg cgctcgtcgc gctgccgcgc cgttc
//
LOCUS       DATIML010001079         7503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3402811, whole genome shotgun sequence.
ACCESSION   DATIML010001079 DATIML010000000
VERSION     DATIML010001079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7503
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3402811"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..760
                     /locus_tag="VLJ38_18550"
     CDS             <1..760
                     /locus_tag="VLJ38_18550"
                     /inference="COORDINATES: protein motif:HMM:NF045090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU41588.1"
                     /translation="DVKSIAKRHQMQERRLIVNTATAYVVTIAVVLGFVKLAWDLRLD
                     AVRSETRAAEERATALDKQLKSLQTRDEGVVRARRQASDFYQLVAQNKRREIIEGFPE
                     ISKADLTPTERATFEAAVERAKDELSLIAYQTGLDHERTGRWQEAATQLRESLAYKSD
                     GPHSASATYELARALVALGMHREAIPMLMTLSEASADREVMDDATFLLAHAQLEIQAY
                     NDAKTTLRAFIRRFPKSPHINEAKGKLAETELFH"
     gene            complement(815..2104)
                     /locus_tag="VLJ38_18555"
     CDS             complement(815..2104)
                     /locus_tag="VLJ38_18555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41589.1"
                     /translation="MALFGAFCALAAAPSCGSERPSLGLRPHPAGAGGQGGSGAQGGG
                     GVGAAVSRPPVAGMGGVSPVKHVETPGRSVFTVVHGIVDADLTAWCFGRVRDGVTKLV
                     GSPVPPGGLAYGASLSFETLDGIDAARDGVVPFVITGDLSAIDGLDCAAAVERATAVM
                     LADRGAGGRDGGASEGGATFEAMAGGGGAAGDAAGAAGAVPVPTPTAGMPPNTTNDSG
                     GHGGEAGAPAALAPALRVGALPSLPAGALGSGFSLLEVADGCFGARAFDDPLASDACG
                     ADYTPNVGSLSAELVTLARETVPNMLALQALHASRATGALGFRTEPSSADDGVQMTLV
                     DDLPEGALRPREPREDFPTSSWGVNTATWSLAATVNGVTYASELWPTVRRRAGLGPLE
                     DGRGYTIIAIGPTPDIGKQGFWHEFAFTLVDNDPSVE"
     gene            complement(2148..2978)
                     /gene="thiD"
                     /locus_tag="VLJ38_18560"
     CDS             complement(2148..2978)
                     /gene="thiD"
                     /locus_tag="VLJ38_18560"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HSU41590.1"
                     /translation="MGRVLIIAGSDSSGGAGIQADVKTVTMLGGYAATAITALTAQNT
                     LGVLAVEPVSPDFVALQMEAVLTDIGADAIKIGMLGDARVVERVAATCRRLAPMVPLV
                     LDPVMVAKGGARLLEPTATRALVSELVPMAALLTPNVPEAEALTGERITDEAALLRVA
                     GRLLLLGPSAVLLKGGHLEGEHVVDYFVTADGEVERFESPRIQTRSTHGTGCTLASAI
                     AVGIAEGLTLVDSVRRARAYVFEAIRTAPGLGSGHGPLNHAHPLAPPAPAQKARSDAN
                     "
     gene            3031..5178
                     /locus_tag="VLJ38_18565"
     CDS             3031..5178
                     /locus_tag="VLJ38_18565"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41591.1"
                     /translation="MNPADDAVRAASLIGSTLVERYRIDAVLTAATASATFRAMDLRE
                     GALALKVFYPEYMRGDADRRFLRDSSALLLLRHPHLVETLGAGTDTQRGLSFLARTLV
                     VARSLDQVLAEVGVLEPVAAVRMALHMARGVNAAHRVGVLHRNVKPENLFVELRPEDQ
                     MIVRVADFSCVRLASDLGPGAPPNELPPGSPDYLAPELLTPGTAVDERVDVWGIGAVL
                     YETLSGSPPFGHLETAADVTLAITADPVPHLQDRAPWVSPELALVVHRALSRDPARRF
                     QSLEELAEALRPLAGGDEQLAYEGVTTVSESVRSHVALRADLDSQPPPPSAPTPRPRD
                     MDELGLVGHRLDRRYQVVRLIGRGGMGAVYEVEDDGGRRFAAKIISRGLAGENHPALL
                     RFAREAKAASAISSPNVVATYDAGTDEELGLPYIIMELLHGTDLSSVLKREGALEPPI
                     AVRLVLQAARGIAAAHAKNVVHRDVKPANLFLQVAENTGEVAVKICDFGVAKRTRLDE
                     TRGKTSGLSLTRTGGMLGSPMYMAPEQARNAKHVDERADIWSIAVVLWEALSGKRLWG
                     AQTSLGELIVAICTEPIERLDEVAPWVPRDLARLVHRGLERDLTHRTPSMQAFIAALE
                     VFAGGSDRVTAEQLVGLTDEHREVLARRAGTLPSGRPLERLSQSSTSGAHRIPPHLAV
                     TRASVVPKANPTGWIIGVLLAIGAAVATIAYMR"
     gene            5255..6292
                     /locus_tag="VLJ38_18570"
     CDS             5255..6292
                     /locus_tag="VLJ38_18570"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HSU41592.1"
                     /translation="MFRAATFNAGLAVGMLPNATERLPHVIEALAALDVDLLFVQEFW
                     LDRHWQALKSALRPRLPVALRLKAVTGAGRPCTLAQLAPLKRCAEAHCGGLRDEALAR
                     CVIQRCATIGLQLPSDCLNCIASNPEGSLDEILGRCTAAADPPAELGDAGARERTGGE
                     LIAYGGSFGTGLLLKEQPLAKASIVFESTINARGAMYARVAGALGAEPLHVFAAHLSP
                     GGAEQGPQVTQLLQFIDDKAGSAPALLLGDLNLTPGSALFERLTRSGFREGNVLGGRG
                     TYSGEGLETGRFGASAWRLDHALLRSSDAELVTERILDEPVLLDVGGRHTRSTLSDHA
                     GLLVTITTQSE"
     gene            6426..7184
                     /locus_tag="VLJ38_18575"
     CDS             6426..7184
                     /locus_tag="VLJ38_18575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41593.1"
                     /translation="MRWLTLLCLVALPLGNPRCPREGVRAGGGAGTAAPQASARNLPG
                     PIRVEALEGSTPPVFVLRGGPVGPEKLVFLHGMCGHGLGYAQSFQRSAAKRGTLIAPQ
                     GDIPCGDGPWARWSKDVAALDRRIRDTFRALGHAEPIRDIIVMGYSQGATRAEALARE
                     YPDVYTRLVLMGGPYAAKARGLEALRAAVAMAGERDRRDLMQASARALAAAGVPATFL
                     LIPEATHGSMGPHPEQTMDEMLTWLSEHERDRAP"
BASE COUNT         1228 a         2675 c         2531 g         1069 t
ORIGIN      
        1 cgacgtgaag agcatcgcca agcgccacca gatgcaggag cggcgcctga tcgtgaacac
       61 cgccacggcg tacgtcgtga cgatcgcggt ggtgctcggc ttcgtgaagc tcgcctggga
      121 cctgcgcctc gacgccgtgc gctcggagac gcgcgccgcc gaagagcgtg cgacggcgct
      181 cgacaaacag ctcaagtcgc tgcagacacg cgacgaaggc gtcgtgcgcg cgcggcgaca
      241 agcctcggat ttttatcagc tcgtcgcgca gaacaagcgg cgcgagatca tcgaaggctt
      301 ccccgagatc tccaaggccg atctcacgcc caccgaacgc gccacgttcg aggcggcggt
      361 cgagcgcgcc aaagacgagc tctcgctcat cgcgtaccag acgggactcg accacgagcg
      421 cacggggcgc tggcaagaag cggcgacgca gctccgcgag tcactcgctt acaagagcga
      481 cggcccgcat tcggcgagcg cgacctacga gcttgcgcgc gctctcgtcg cgctcggcat
      541 gcaccgcgaa gcgatcccca tgctcatgac gctctcggaa gcgtcggccg atcgcgaagt
      601 gatggacgat gccacgttct tgctcgcgca cgctcagctc gaaattcagg cctacaacga
      661 cgcgaagacg acgctacgcg ccttcatccg ccgcttcccg aagagcccgc acatcaacga
      721 agccaagggc aagctcgccg agacggagct ctttcactga cgtccggcgg agctcgacgc
      781 acgcggtgtc gcagccacac gcgcgcgcga agcgctactc gacgctcgga tcgttgtcga
      841 cgagcgtgaa cgcgaactcg tgccagaagc cctgcttgcc gatgtccggg gtggggccga
      901 tggcgatgat ggtgtagccg cggccgtcct cgagcgggcc caagccggcg cggcgccgca
      961 cggtcggcca gagctctgag gcgtaggtga cgccgttcac cgtggcggcg agcgaccaag
     1021 tggcggtgtt gacgccccag gacgacgtcg ggaaatcctc gcgcggctcg cggggacgga
     1081 gcgctccttc ggggaggtcg tccacgagcg tcatctggac gccgtcgtcg gcggagctcg
     1141 gctcggtgcg gaaaccgagc gcgccggtcg cgcgggaagc gtgcagcgct tggagcgcga
     1201 gcatgttcgg gaccgtctcg cgcgcgagcg tgacgagctc cgcggacaac gagccgacgt
     1261 tcggggtgta gtcggcgcca cacgcgtcgc tcgcgagcgg atcatcgaag gcccgcgcgc
     1321 caaaacagcc gtcggcgacc tcgagcaagc tgaagccgga gccgagcgcg ccggcgggca
     1381 ggctcgggag cgcaccgacg cgcaaagcag gcgccagggc cgcgggtgcg cccgcttcgc
     1441 ccccgtggcc gccgctgtcg ttcgtcgtgt tcggtggcat gccagcggtc ggtgtgggca
     1501 ccggcacggc accggctgcg cccgccgcat caccggccgc tccgccgccg cccgccatcg
     1561 cttcgaaagt cgcgccgcct tcgctcgcgc cgccgtctcg acctccggcg ccgcgatccg
     1621 cgagcatgac cgccgtggct cgctcgacgg cggcggcaca gtcgagtccg tcgatggccg
     1681 acaagtcacc cgtgatcacg aaaggcacga cgccgtcacg cgcggcgtcg ataccgtcga
     1741 gtgtttcgaa cgagagcgac gcgccgtacg cgagtccgcc gggcggaacc ggcgaaccga
     1801 cgagcttcgt cacgccgtcg cgcacgcgcc cgaaacacca agccgtgagg tcggcatcga
     1861 cgatgccgtg caccacggtg aacacggagc gccccggcgt ttccacgtgc ttcaccgggc
     1921 tcacgccgcc catgcccgcg acgggcggcc gcgaaacggc ggcgcccacg ccgccgccac
     1981 cctgcgcgcc ggagccaccc tgaccgcccg cgcctgccgg atgcggccgc aagccgagcg
     2041 acggacgctc ggaaccacag ctcggtgcgg ccgcgagcgc gcagaacgcg ccgaagagcg
     2101 ccatgccgcg tcgtgctccg cggcccggag cgccgcgctc gctcgggtca gttcgcatcc
     2161 gagcgcgctt tctgcgcggg cgcggggggc gcgagcggat gagcatgatt gagcggaccg
     2221 tggcccgaac cgagacccgg cgccgtgcga atggcctcga aaacgtaagc gcgcgcgcgc
     2281 ctcaccgaat cgacgagcgt gagcccctcc gcgatgccga cggcaatcgc agacgcgagc
     2341 gtgcagcccg tcccgtgcgt cgagcgcgtc tggatacgcg gcgattcgaa gcgctcgact
     2401 tcgccgtcgg ccgtgacgaa gtaatcgacg acgtgctcgc cctcgagatg tccgcctttg
     2461 agcagcaccg ccgacggccc gagcaagagc agtcggcccg cgacgcgcag gagtgccgct
     2521 tcgtccgtga tgcgctcgcc cgtgagcgct tccgcttccg gaacgttcgg agtgaggagc
     2581 gcggccatgg gaacgagctc ggacacgagc gcgcgcgtcg ccgtgggctc gagcagccgc
     2641 gcgccgcctt tggccaccat caccggatcg aggacgagcg ggaccatggg cgcaagccgc
     2701 cggcaggtcg ccgccacacg ctcgacgacg cgtgcgtcac ccagcatgcc gatcttgatc
     2761 gcgtcggcgc cgatgtcggt gagcaccgcc tccatctgga gcgcgacgaa gtcggggctc
     2821 acgggctcga ccgcgaggac acccagcgta ttttgcgcgg tgagcgccgt gatcgccgtc
     2881 gcggcgtaac cgccgagcat cgtcacggtc ttcacgtcgg cttggatgcc ggcgccgcca
     2941 ctcgaatccg aaccggcgat gatgagcacg cgacccacga ggaaagggat agcgcagggt
     3001 gggccgcctc gctattctgg atcgcacagc gtgaatcctg cagacgatgc ggtccgagcc
     3061 gcgagcctga tcggcagcac gctcgtcgaa cgttaccgca tcgacgcggt gctcacggcc
     3121 gcgacggcga gtgcgacgtt tcgcgcgatg gatctgcgtg agggagcgct cgcgctcaag
     3181 gttttctacc ccgaatacat gcgcggcgac gccgatcgcc ggttcttgcg cgactcgagc
     3241 gcgctgctct tgctccgcca ccctcacctc gtggagacgc tcggcgcggg caccgacacc
     3301 cagcgcggct tgagttttct cgcgcgcacg ctcgtcgtgg cccgcagcct cgatcaggtg
     3361 ctggccgagg tcggcgtgct cgagcccgtc gccgcggtgc gcatggccct gcacatggcc
     3421 cgcggcgtga acgccgctca tcgcgtcggc gtcctgcacc gaaacgtcaa acccgaaaac
     3481 ctgttcgtcg agctccggcc cgaggatcag atgatcgtgc gcgtcgccga tttcagctgc
     3541 gtgcggctag cgagcgatct cggacccggc gcccctccga acgagctgcc gcccggctcg
     3601 cccgactacc tcgcgcccga attgctcacg ccggggacag cggtcgacga gcgcgtcgac
     3661 gtctggggca tcggcgccgt gctctacgaa accctgagcg gtagcccgcc gttcgggcac
     3721 ctcgagacgg ccgccgacgt gacgctcgcc atcacggccg acccggtgcc gcacctgcag
     3781 gaccgtgcgc cctgggtttc acccgagctc gccctcgtcg tgcaccgcgc gctctcccgc
     3841 gatcccgcgc gccgctttca gagcctcgag gaactcgccg aggcgctgcg tcccttggcc
     3901 ggcggcgacg aacagctcgc gtacgaaggt gtcaccacgg tctcggagtc ggtgcgctcg
     3961 cacgtcgcgc tgcgcgcgga tctcgactcg caaccaccgc cgccctcggc gcccacgccg
     4021 cgaccgcgcg atatggacga gctaggcctc gtcgggcacc gcctggatcg gcgctatcag
     4081 gtcgtgcgcc tgatcggccg cggcggcatg ggcgccgtgt acgaagtcga ggacgacggc
     4141 ggccggcgct tcgctgccaa gatcatttcg cgggggctcg cgggcgaaaa tcaccccgcg
     4201 ctcttgcgct tcgcgcgcga ggccaaggcc gcgagcgcca tctcgagccc gaacgtcgtg
     4261 gcaacctacg acgccggcac ggacgaagag ctcggcttgc cctacatcat catggagctc
     4321 ttgcacggca ccgatctctc gagcgtgctc aagcgcgaag gggcgctcga gccgcccatc
     4381 gccgtgcggc tcgtgctgca agcggcgcgc ggcatcgcgg ccgcacacgc gaagaacgtc
     4441 gtgcaccgcg acgtgaaacc cgcgaacctc ttcctccaag tcgctgaaaa caccggcgaa
     4501 gtcgccgtaa aaatctgcga cttcggcgtc gccaaacgca cgcgcctcga cgaaacgcgc
     4561 ggcaagacga gcggcctcag cctcacgcgc acgggcggca tgctcggctc ccccatgtac
     4621 atggcgcccg agcaggcgcg caacgccaag cacgtcgacg agcgcgccga catctggagc
     4681 atcgcggtcg tgctctggga agcgctcagc ggcaaacgcc tgtggggcgc gcaaacctcg
     4741 ctcggcgagc tcatcgtcgc catctgcacc gagcccatcg aacgcctcga cgaagtcgcg
     4801 ccctgggtcc cgcgcgatct cgctcgcctc gtgcatcgcg gcctcgagcg cgacctcacg
     4861 caccgcacgc cgagcatgca agccttcatc gccgcgctcg aagtcttcgc gggcggctcc
     4921 gatcgcgtga ccgccgaaca actcgtcggc ctcaccgacg aacaccgcga agtcctcgct
     4981 cgccgcgccg gcaccctccc gagcggtcgc ccgctcgaac gcctgtccca aagcagcacg
     5041 agcggcgccc accgcatccc ccctcacctc gccgtcacgc gcgcgagcgt cgtgcccaaa
     5101 gccaacccga cggggtggat catcggcgtg ctcctcgcga tcggggccgc tgtcgcgaca
     5161 atcgcctaca tgcgctgaaa acgcggcgtt ctgcgcatgc ccgcgctgcg gtccttccgc
     5221 ggaacgatgg cacgcccaat gcacggccca gagagtgttc cgggcagcga ccttcaatgc
     5281 tggcttggcc gtcgggatgc tgccgaatgc gaccgaacgg ctgcctcacg tcatcgaggc
     5341 gctggcggct ttggacgtcg acctgctttt cgtccaggaa ttttggctgg atcgtcattg
     5401 gcaggcgctc aagtccgcgc tccggccccg cttgcccgtg gcgttgcgac tcaaggcagt
     5461 gacgggcgcg gggcggcctt gcacgttagc gcagctcgct ccgttgaagc gctgcgccga
     5521 ggcgcattgc ggaggcctcc gcgacgaagc actcgcccgc tgcgtcattc agcgctgcgc
     5581 cacgatcggc ctgcagctgc cgagcgactg cctcaactgc atcgccagta atcctgaagg
     5641 cagtctggac gagattttag ggcgctgtac ggccgccgcg gacccgcccg ccgagctagg
     5701 cgacgcggga gcgcgggagc ggacgggcgg agagctcatc gcttacggag gctcgttcgg
     5761 aaccgggctc cttttgaaag aacaaccgct cgcgaaagcc agcatcgtct tcgaatcgac
     5821 gatcaacgcg cgcggcgcga tgtacgcgcg agtcgcgggc gcactaggcg cagagcctct
     5881 ccacgtgttt gccgcgcacc tgtcgcccgg cggcgccgag cagggaccgc aggtcacgca
     5941 gctgctccaa ttcatcgacg acaaagccgg gagtgcgcca gccctgctgc tcggtgattt
     6001 gaacctgacg cccggctctg cgctgttcga gcgtctgaca cgctcgggat tccgtgaagg
     6061 caacgtgctc ggcggccgcg gcacttacag cggcgaaggc ctcgagaccg ggcgcttcgg
     6121 tgcctcggct tggcgtctcg accacgccct gctccgcagc agcgacgcgg agctcgtcac
     6181 cgagcgcatc ctcgacgagc ccgtactgct cgacgtgggc ggcaggcaca cccgctcgac
     6241 gctctccgat cacgcgggcc tgctcgtcac gatcacgacc caatccgagt aggttgtttg
     6301 ttggaccaga tcagcctacg aacggcccag gctaaaaagc attgccgtgc gctcgcggtg
     6361 agcgccggac gttcagggcg ttttcgccct gttgacggag ctgtgctgcc ggctatgcct
     6421 gactcgtgcg ctggctgacg ctgctttgtc tggtcgcgct gccgctcggc aacccgcgct
     6481 gcccacgtga gggcgtacgt gccggcggcg gcgcgggcac ggcggcgccg caagcttccg
     6541 cgcggaacct gccgggtccc atccgcgtcg aggcgctcga ggggagcacg ccgcccgtgt
     6601 tcgtgctgcg cggcgggccc gtgggaccgg agaagctcgt gttcttgcat ggcatgtgcg
     6661 gccacgggct cggctacgca caatccttcc aacggagcgc cgccaaacgg gggacactga
     6721 tcgcgccgca aggggacatt ccgtgcggtg acggaccgtg ggcgcgctgg tcgaaggacg
     6781 tcgccgcgct cgaccgtcgc atcagggata cgtttcgcgc gctcggccac gcggagccca
     6841 tccgcgacat catcgtgatg ggctactcac agggcgcgac ccgagccgaa gcgttggctc
     6901 gcgagtatcc ggacgtgtac acgcggctcg tgttgatggg aggcccgtac gcggcgaaag
     6961 cccgcggcct cgaagcgctg cgcgccgcgg tggccatggc gggggaacgg gaccggcgcg
     7021 acttgatgca agcgagcgct cgcgcgcttg cggccgccgg cgtgcctgca accttcctcc
     7081 tcattccgga agccacccac ggctccatgg gcccgcaccc ggagcaaacg atggacgaaa
     7141 tgctcacatg gctgagcgag cacgagcgcg atagagcgcc gtgaacgacc gcgttaacac
     7201 gcctggcgtg tccggctgat gcaggaacgt gcccgccgag gcagtaggcc acgtcgctga
     7261 aagctcgaag gccatcgagg cgccctgagc ggctgccgcg ccggcacggc gattgcctgt
     7321 acagatgagc aggagacact tcatggccga caacacggag ctcgacggaa atcccaagaa
     7381 aatccacgaa cctgtcggga atctacagaa ggatccggac gactgggtca cgggcgaaga
     7441 agcgatgacg gccgcccagg cttcctactt gaagacgctg tgtgaagaag cgcacgagcc
     7501 gtt
//
LOCUS       DATIML010001080         4569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2247404, whole genome shotgun sequence.
ACCESSION   DATIML010001080 DATIML010000000
VERSION     DATIML010001080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4569
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2247404"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /gene="fumC"
                     /locus_tag="VLJ38_18580"
     CDS             complement(<1..187)
                     /gene="fumC"
                     /locus_tag="VLJ38_18580"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321776.1"
                     /note="class II family (does not require metal);
                     tetrameric enzyme; fumarase C; reversibly converts
                     (S)-malate to fumarate and water; functions in the TCA
                     cycle; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HSU41594.1"
                     /translation="MSATRIEKDTFGPIEVPSDRLWGAQTQRSLQNFAISGERMPLAL
                     LHALATVKKAAALVNQDL"
     gene            complement(270..1415)
                     /locus_tag="VLJ38_18585"
     CDS             complement(270..1415)
                     /locus_tag="VLJ38_18585"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HSU41595.1"
                     /translation="MVTSPNDATAARRALFLTLALAAGSACSSDHRANTSPAAAAECP
                     GQVQQGLVGATTDESFLGITPAQARAIVELIDGSGTSHARCSGTFVTPDWVLGAAHCL
                     AISSPAARLQLVPGSAPSVLPFARTEVHPSLDLALFQIDAAAWVDANDVRDLGVTPIP
                     ASSVDPRLSVGAPVELAGYGLTQTDDDPERRFLVESIIEVDGTTLRVDGFGLTGACEG
                     DSGGPLLARGADGSLVVAGALSNGSGSCRGTDRYVRTDAATAWLTSITGPYTAPAPAC
                     GSIDAEGRCLYGSALWCEDDVLTTRTCATHGDVCGWDPAANGFRCVPARTARCANTDA
                     LGTCRGGTVATCDAGELVVTPCGSCNACRLGGQTGAPYCANAADPAE"
     gene            1581..3980
                     /locus_tag="VLJ38_18590"
     CDS             1581..3980
                     /locus_tag="VLJ38_18590"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSU41596.1"
                     /translation="MLPARAADDKNPAPAVKKAAPKPEGSVAPTAKKKPEPAPAPAKK
                     TDPPPPAPKKADAPAAPSKRAEPTAGSVKKGDPTPAGKDAAALPKKAEPSSVKLEPVG
                     SLPALESPDPHHGQGTRKIEARPAPHVPPAPVPTENNARAAARRGTPPTHPAATLPRG
                     TAPRGVDFATRRQIAGGATADELKATKDDPELAKLLEAERVLFPRPLRGMAPGWSWEL
                     PEVGTGGATALDTGLPPSRGSFTSAPPSPKEADWLRGLSVPNLPLHYDERLLKYLKFF
                     RDSPSGSAVARVWARKSGRYEAAVRGALGQAGLPTDLVWLSLIESGHNPSIVSPAGAV
                     GLWQFMPETARTYGLTVDRWVDERLDPERETQAAVRYLADLYHRYGSWDLAMAAYNMG
                     HGGLSRAIKKFNTNDFWELARHEAGIPWETTLYVPKILATAIVMNNKRAFGLDGIKPD
                     PPESFDAVEVGPGLALADIGRAAGVEAGVVEGLNPMYVAGRTPPLAPGRASVSYSVRL
                     PRGARPLPGRLLALESARDELATYVVKQGDTVASVAKVTGANEAMVRSLNRIGTQESL
                     AAGTPLIVPKLAVAPTPAPAHDDDVVVIARDLAPPPDTSRVFYPIVAGDSIDSIASAF
                     GVARSDLLAWNALDADARLQDGMVLQVFPKRSQNLARLRHLRAGDVKILVAGTPEFFD
                     HFEGLNGKRRLVVTVRQGDTLASIGRRYDTTVGWMERINRRSRTDELRAGESVVVYAD
                     RGRYPAKASPIAQTGTAPAAFRDGPGGVDAFAAFATGAMRAAGTDFAEQGDDRPLEPT
                     P"
     gene            3977..>4569
                     /locus_tag="VLJ38_18595"
     CDS             3977..>4569
                     /locus_tag="VLJ38_18595"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSU41597.1"
                     /translation="MKDVTAVILAAGMGTRMKSSLPKVLHRAAGRPLVEYPVRAALEL
                     GVASVVVVTSGHPEIARSLDAAFGARVTTVVQDPPRGTGDAARVGLARVETERALIYY
                     GDAPLMTARELEAIVAASREAELAFASALPENPHGYGRVLRDESGRVLEVREQRDLRS
                     DAERGVREVNAGVYAAKKSVLARAIAELKPMNAQGEL"
BASE COUNT          741 a         1573 c         1601 g          654 t
ORIGIN      
        1 cgagatcctg attcacgagc gccgcggcct tcttgaccgt cgcgagcgcg tggagcagcg
       61 cgagcggcat gcgctcgccc gaaatcgcga agttttgcag actgcgctgc gtctgagcgc
      121 cccatagccg gtcgctcggg acttcgatgg gaccgaaggt gtctttttcg atgcgcgtgg
      181 cggacatgat ggccctcacg taccagaatt ttcgccggac tgggcaccct cgcgcgtgcg
      241 agcgccgcgc gcgacccacg tcgaggcggc tactccgcag gatccgcggc gttcgcgcag
      301 taaggcgcgc ccgtctgccc gccgaggcgg caggcgttgc agctgccgca gggcgtgacg
      361 acgagctcac ccgcgtcgca ggtcgcgacg gtgccgccgc ggcaggtccc gagcgcgtcc
      421 gtattcgcgc agcgcgcggt gcgcgccggc acgcaacgaa agccgttcgc ggccgggtcc
      481 cagccgcaca cgtcgccatg ggtcgcgcaa gtgcgggtcg tgagcacgtc gtcttcgcac
      541 cagagcgcgc tcccgtaaag acagcgcccc tcggcgtcga tcgagccgca agcaggcgcg
      601 ggcgccgtgt acggccccgt gatcgacgtg agccaagccg tggcggcgtc ggtgcgcacg
      661 taacggtccg tgcctcgaca cgaccccgat ccgttcgaga gcgcgccggc gacgacgagc
      721 gagccgtccg ctccgcgcgc gagcagcggc ccaccggagt cgccctcgca ggcgcccgtg
      781 agcccgaagc cgtcgacgcg cagcgtcgtg ccatcgacct cgatgatcga ttccaccaaa
      841 aacctacgtt cggggtcgtc gtcggtttga gtgagcccgt aaccggcgag ctcgacgggg
      901 gcaccgaccg agagtctagg atcgaccgag cttgccggga tcggagtgac gccgaggtcg
      961 cgcacgtcat ttgcgtccac ccacgcggcg gcgtcgatct gaaacagcgc aaggtcgagc
     1021 gatggatgga cttcggtgcg agcgaacggg agcacgcttg gcgcgctacc cggaaccagc
     1081 tgcaggcgag ccgcgggcga ggagatagcg aggcagtgcg ccgcgccgag cacccaatcg
     1141 ggagtcacga aggtgccgct gcagcgcgcg tggctagtgc cgctgccgtc gatcagctcg
     1201 acgatcgcgc gggcctgcgc gggcgtgatg ccgaggaagc tctcgtccgt ggtggcaccg
     1261 acgagcccct gctgaacctg gccggggcac tctgcggcgg ccgcaggcga agtgtttgct
     1321 cggtggtcgg atgaacacgc gctcccagcg gcgagagcga gtgtcaggaa cagcgcgcgc
     1381 cgcgcggccg tcgcgtcgtt cggactcgtc accatgccgc gccttgccgc cctcgcatcc
     1441 tgctcaccgt ggccgactat agcttcgcct tggctgcgga tttgaccaga cgaaagccga
     1501 ccggtacacc gaagcgcatg gccccggctc gccctttgcg ggcgtcgctc ctcgcgttag
     1561 ctctgctcgg gcccggtttc gtgctgcccg ctcgggccgc cgacgacaaa aaccctgcgc
     1621 ctgccgtaaa aaaggcggcg ccgaaacccg aggggtccgt cgcccccacg gcgaagaaga
     1681 agccggagcc cgcgcccgcc ccggccaaaa agaccgatcc gccgccgccg gcgccgaaaa
     1741 aggccgacgc gcccgctgcg ccgagcaaaa gagccgagcc gacggccggc tccgtcaaaa
     1801 agggcgaccc cacccctgcc gggaaggacg ctgccgcgct cccgaaaaag gcggagcctt
     1861 cgagcgtcaa gctcgagccc gtcggttcgc tgcctgcgct cgagtcgccc gatccgcatc
     1921 acggccaggg cacgcgcaag atcgaagcac gcccggcgcc gcacgttccg ccggccccag
     1981 tcccgactga aaacaacgcc agagctgccg cgcgccgggg cacgccgccc acgcatccgg
     2041 ccgcgacgct gccgcgtggc acggcaccgc gcggggtcga ctttgccacg cgacgtcaaa
     2101 tcgcgggcgg ggcgaccgcg gacgagctca aggcgacaaa ggacgatccg gagctcgcga
     2161 agttgctcga agcggaacgc gtgctgtttc cgcgaccgct gcgcggcatg gcgcccggct
     2221 ggtcgtggga gctcccggaa gtcggtaccg gcggcgcgac cgccctcgat acggggctac
     2281 caccgagccg aggcagcttc acgagtgccc ccccgagtcc caaagaagcc gattggctca
     2341 gaggactttc cgttccgaat ctgccgctgc actacgacga gcgactgctc aaatacttga
     2401 agttttttcg cgacagtccg agcgggtcgg cggtcgcgcg cgtgtgggcg aggaagagcg
     2461 ggcgttacga ggccgcggtg cgcggggcgc tcgggcaagc gggcttgccg acggatctcg
     2521 tgtggctctc actgatcgag agcggtcaca atccgagcat cgtttcgccg gccggcgccg
     2581 tggggctttg gcaattcatg cccgaaaccg cgcgcaccta cgggctcacg gtcgatcgct
     2641 gggtcgacga gcggctggat cccgagcgcg aaacgcaagc cgccgtgcgc tacctcgccg
     2701 atctctatca ccgctacggt agctgggatc tggcgatggc ggcttacaac atgggtcacg
     2761 gcgggctctc gcgtgcgatc aagaagttca acaccaacga cttctgggag ctcgcgcggc
     2821 atgaagccgg cattccctgg gaaaccacgc tgtacgtgcc gaagatcctc gcgacggcga
     2881 tcgtcatgaa caacaagcgc gcgttcgggc tcgacggcat caagccggac ccgccggaga
     2941 gcttcgacgc agtcgaggtc gggccggggc ttgcgcttgc cgacattgga cgcgccgcgg
     3001 gggtcgaagc gggcgtcgtc gaagggctca atccgatgta cgtggcggga cgaacgccgc
     3061 cgctcgcgcc gggacgcgcc agcgtgagct attcggtgcg cttgccgcgc ggcgcgcggc
     3121 cgctgcccgg tcgtttgctc gcgctcgaat cggctcgtga cgagctcgcg acgtacgtcg
     3181 tcaaacaagg cgataccgtc gcgagcgtcg ccaaagtgac cggcgcgaac gaagcgatgg
     3241 tgcgcagctt gaaccggatc ggcacgcaag agtcgctcgc tgccggcacg ccgctcatcg
     3301 tgccgaagct cgccgtcgcg cctacgccgg cgcctgccca cgacgacgac gtggtcgtga
     3361 tcgcccgcga cctcgcgccg ccgcccgaca cgtcgcgcgt gttttatccc atcgtggcgg
     3421 gcgacagcat cgactcgatc gcgtccgctt tcggcgtggc gcgaagcgat ctgctcgcgt
     3481 ggaacgcgct cgacgccgac gcgcgtctgc aggacgggat ggtgctgcaa gtcttcccga
     3541 agcgttcgca gaacctcgct cgtctccgcc acctgcgcgc cggtgacgtg aagatcctcg
     3601 tcgcgggcac gcccgaattc ttcgatcact tcgaggggct gaacggcaag cgacgcctgg
     3661 tcgtgacggt gaggcagggt gacacgctcg cgtccatcgg ccgccgctac gacacgacgg
     3721 tcggctggat ggagcgcatc aatcgccgct cgcgcacgga tgagctccgc gcgggtgaga
     3781 gcgtcgtggt ctacgccgat cgcggccgct atccggcgaa agcgtcgccg attgcgcaga
     3841 cgggcacggc gccggccgcg tttcgcgatg ggccgggcgg tgtcgatgcg tttgccgcat
     3901 ttgcaacggg agcgatgcga gcggcaggta cggattttgc tgaacaaggc gacgacagac
     3961 cgctcgagcc aacaccatga aagacgtaac ggccgtgatt ctcgccgcgg gcatgggcac
     4021 ccgcatgaag agcagcctgc ccaaggtgct tcaccgcgcc gcggggcggc ccctcgtcga
     4081 gtacccggtg cgcgccgcgc tcgagctcgg cgtcgcgtcc gtggtggtcg tgacgagcgg
     4141 gcatcccgaa atcgcgcgct cgctcgacgc tgcgttcggt gcgcgcgtga ctacggtcgt
     4201 gcaagatccg ccgcgcggca cgggtgacgc cgcgcgcgtc ggcctcgcgc gcgtcgagac
     4261 cgaacgggcg ctcatctatt acggtgacgc gccgctcatg acggcgcggg agctcgaggc
     4321 gatcgtcgcc gccagtcgcg aggccgagct cgcttttgcg agcgccctgc ccgaaaatcc
     4381 gcacggctac gggcgcgtgt tgcgggacga gagcggccgc gtgctcgagg tgcgcgagca
     4441 gcgcgacctc cgaagcgacg ccgagcgcgg cgtgcgtgaa gtgaacgccg gcgtctacgc
     4501 cgcgaaaaag tcggtgctcg cgcgcgccat cgcggaattg aagccaatga acgcgcaggg
     4561 cgagctcta
//
LOCUS       DATIML010001081         1807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_517357, whole genome shotgun sequence.
ACCESSION   DATIML010001081 DATIML010000000
VERSION     DATIML010001081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517357"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(216..>1807)
                     /locus_tag="VLJ38_18600"
     CDS             complement(216..>1807)
                     /locus_tag="VLJ38_18600"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU41598.1"
                     /translation="LATRELLACVQDRVFWRARLGISFGLLEAMIERLHVLPLEYHRG
                     TSVGATMTKIERGMAGVTTAFSDFAVQLFPALVYLCVALGVMLKVDYRLSLVVLVFAP
                     LPAIVGTFAAREQTEREQGLLDRWVKIFSRFNEVLSGILVVKSFVMEEREKRRFLEGV
                     QAANGVVLRGVATDSKLNAFRNGIIAFARVISLGLGGLLVLRGEIGVGTLVAFLAYLM
                     GVFQPVQALTGLYQALRRATVSADSVLSILEARVSFDDAPHAREAAALRGEVEFRNVV
                     FGYDSERPLLRHLDFHARPGSVTALVGPSGAGKSTIVALLQRLYAPASGSILLDGEDA
                     RELTQRSVRSQIAVVLQEGLLFSDSVRDNIAFGRPGASQQEIEAAARAANAHDFITAL
                     PDGYDTPVGERGSKLSGGERQRIAIARALLKNAPILVLDEATSALDAENEEKVQEALA
                     RLTRGRTTFIVAHRLSTIVSADQILVVKDGAIAERGTHGELVRAGGYYATLTAKQRAG
                     LPPDPTPREEPSYTSNVAAAE"
BASE COUNT          299 a          598 c          626 g          284 t
ORIGIN      
        1 ctcgtcatca ccgctcgctc actcgcctgc atggggacct ccgccggctg tcgtctcgag
       61 tgacgatgtc gcccagccgc aggctacttc agcccgccgg cgtgtggttc accaggtcgc
      121 gcatcagcgt cgaaaaggtg cccgctgcag cgttgcacgt gaggcacgca gtaattgcac
      181 gcgcgcaaaa ttgacgcgac ggtgctcgag cctcttcatt cagcggcagc gacgttcgac
      241 gtgtaggacg gttcttctcg cggcgtgggg tcgggaggca ggcccgcgcg ctgcttggcc
      301 gtgagcgtcg cgtagtagcc gccggcgcgt acgagctcgc cgtgcgtgcc gcgctccgcg
      361 atcgcgccgt ctttgacgac caagatttga tcggccgaga cgatggtcga aaggcggtgc
      421 gcgacgatga acgtggtgcg tccgcgcgtg aggcgcgcca gagcctcttg aaccttctcc
      481 tcgttctccg cgtcgagcgc ggaggtcgcc tcgtcgagca cgaggatggg ggcgtttttc
      541 agcagcgccc gggcgatggc gatgcgctgc cgttcgccgc ccgagagctt cgagccgcgt
      601 tcgccgacgg gcgtgtcgta gccgtccggt agcgccgtga tgaagtcgtg agcgttggct
      661 gcgcgcgctg ccgcttcgat ctcttgctgg cttgccccgg gacgaccgaa tgcgatgttg
      721 tcgcgcacgc tgtcgctgaa caagagtcct tcttggagca cgacggcgat ctgcgagcgc
      781 accgagcgct gcgtgagctc gcgcgcgtcc tcaccgtcga gcaggatcga tccggatgcg
      841 ggggcgtaga gccgctgcag gagcgccacg atggtcgact tgccggcgcc gctcggcccg
      901 acgagcgccg tgacgctgcc ggggcgcgcg tggaagtcga ggtgacggag cagcggccgt
      961 tcgctgtcgt agccgaagac cacgttgcga aattcaacct cgccgcggag cgctgccgct
     1021 tcgcgcgcgt gcggagcatc gtcgaaggac acgcgcgcct cgaggatcga gagcacggag
     1081 tcggccgaga cggtcgcgcg tcgcagcgct tggtagagcc ccgtcagcgc ttgcacgggc
     1141 tggaacacgc ccatcagata cgcgaggaac gcgacgagcg tgcccacgcc gatttcgccg
     1201 cggagcacga gcaggccacc gagcccgagc gaaatcacgc gcgcaaaggc gatgatgccg
     1261 ttgcggaacg cgttgagctt cgaatccgtc gcgacgccgc gcaagacgac gccgttcgct
     1321 gcctggactc cttccaagaa acggcgcttc tcgcgctcct ccatgacgaa gctcttcacg
     1381 acgagaatcc cgctcagcac ctcgttgaag cgcgagaaga tcttcaccca gcggtccagc
     1441 aagccctgct cgcgctcggt ctgttcgcgc gccgcgaagg tccccacgat ggcgggcagc
     1501 ggcgcgaaga cgagcacgac gagcgaaagc cggtaatcga ccttgagcat gacgcccagc
     1561 gcgacgcaca ggtacacgag cgccgggaag agctgcacgg cgaagtcgct gaacgccgtg
     1621 gtcacgcccg ccatgccgcg ctcgatcttc gtcatcgtcg cgcccacgct cgtgccgcgg
     1681 tggtactcga gcggcagcac gtgcaggcgc tcgatcatcg cctccaagag gccgaaggag
     1741 atgccgaggc gagcgcgcca gaacacgcgg tcttggacgc aggcaaggag ctcgcgcgtg
     1801 gcgagga
//
LOCUS       DATIML010001082         2845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4270163, whole genome shotgun sequence.
ACCESSION   DATIML010001082 DATIML010000000
VERSION     DATIML010001082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4270163"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VLJ38_18605"
     CDS             <1..238
                     /locus_tag="VLJ38_18605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41599.1"
                     /translation="GIEAPERGDLLYAYAWPRLQSGRLATFAGGSNLGLKLGLPGAAS
                     LVPLVLWGSVGFAYLWLQVARRPELPAPVMAPGT"
     gene            248..1756
                     /locus_tag="VLJ38_18610"
     CDS             248..1756
                     /locus_tag="VLJ38_18610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41600.1"
                     /translation="MRGITGSARSLPLCVLVGLVWLLAFIHAGPRGDGGEYLLETHAL
                     ATHGTPDIRVSDAEWLAASEPTYRTFARHLSYGLRRGELVPVAAIRRSERGAYYSLHF
                     WFYSLLAVPALWLSEALGAEPSVALVLVNALAGSIAVVALWLHFERRLFALAAATVFV
                     VTGTALYLGWTGPEALTGAAVVCSCIAASRGKLGVGCLAAALAATQNAAALALVPFVA
                     ARCRLRHARPDRQDALLAALALALALLPYAFFYAAFRIPSLLAHFATDPRLISFERAW
                     SFFFDLNQGLLYGMPGVLFACVAAASLALTATKTSARMLIAREVALSVLLVTAMMVPA
                     LAVHNWNAGCSVLIRYGYWIALPLLVLALELTQASLGESRRGWFVLGVTLALGFGVMV
                     SNGVTGERYGYLRHTWLAEFVLHHAPGAYNPVPEIFSERTLGAERPPRDPLPVLWPRR
                     GTPMKLLVPEDEPARSERLCPDGGNAASDHVHVASGGWLYLDAPFRCVPSAS"
     gene            complement(1773..>2845)
                     /locus_tag="VLJ38_18615"
     CDS             complement(1773..>2845)
                     /locus_tag="VLJ38_18615"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HSU41601.1"
                     /translation="DDDSPDGTWKVVQAILPAHPQLRLMRRQGEKGLSTAVIRGWQAA
                     RGEVIGVMDADMQHPVEANLGLFDEIERGADLAVASRHVSGGGVSDWSAARRVLSRGA
                     QLLGLLLLPGVLGRLTDPMSGYFMLRRSAIEGIELSPLGYKILIEVVARGRVRWIGET
                     GYVFRERAEGESKVTARLYLQYFQHLLRLRWATLPSSQLFRFCIVGGTGVVVDMGMLF
                     LLSDPRMLGWGLTRSKIIGAETAILTNFLLNDAWTFRELARTAPGLKRKFRRFLGFNA
                     ICTAGLALNVLLLNLLFNVWHVDRYLANALAILAVTFWNYALNRRLNWAPGGPLSRRS
                     RAPSFAAARAPETTRTSGEAAP"
BASE COUNT          415 a         1009 c          913 g          508 t
ORIGIN      
        1 cggcatcgaa gcacccgagc gaggcgacct gctctacgcc tacgcctggc cccggctcca
       61 gagcgggcgg ctcgcgacat tcgccggcgg ctcgaacctc gggctcaaac tcgggctgcc
      121 cggcgcggcc tcgctcgttc ccctcgtgct ttggggcagc gtcggttttg cgtatttgtg
      181 gcttcaggtc gcgcgtcgtc cagagctgcc ggcccccgtg atggcgccgg gcacgtgagg
      241 cgactcgatg cggggcatca cggggagtgc gcgttcactg ccgctctgcg ttctcgtcgg
      301 gctcgtttgg ctcctggcgt tcattcacgc cgggccgcgt ggtgacggcg gcgagtacct
      361 actcgagact cacgcgctcg cgacgcacgg gacgccggac attcgcgtga gcgacgccga
      421 gtggctcgcc gcaagcgagc cgacctaccg caccttcgcc cgccacctct cgtatggttt
      481 gcgacgcggc gagctcgtgc ccgtcgccgc catccgccgc tcggagcgtg gcgcgtacta
      541 ctcgctgcat ttttggtttt actccttgct cgccgtgccg gcgctttggc tgagcgaggc
      601 cctcggagca gagccgagcg tggcgctcgt tctggtcaac gctttggcag gcagcatcgc
      661 cgtggtcgcg ctgtggctgc acttcgagcg ccggctgttt gccctcgcgg ccgcgacggt
      721 tttcgtcgtt accgggaccg cgttatacct tggctggact gggcccgaag cgctcacggg
      781 tgctgctgtg gtttgctcgt gcattgccgc aagccgcggc aagctcggtg ttggttgcct
      841 cgcggcagct ctcgcggcga cgcaaaacgc tgcggcgctc gcgctcgttc cgttcgtcgc
      901 cgcgcgctgc cgtcttcgcc acgctaggcc cgaccgccaa gacgcgctgc tcgccgcgct
      961 tgccttggct ctggccctgc tgccgtatgc cttcttttac gcagcgttcc gcatcccgag
     1021 cttgctcgcg catttcgcga ccgacccacg cctcatcagc ttcgagcggg cgtggtcgtt
     1081 cttcttcgac ctcaatcagg ggctgctcta cggcatgccc ggcgtgctct tcgcgtgcgt
     1141 cgccgcggcg tcgctggccc tgaccgccac gaaaacgagc gctcgcatgc tcatcgcgcg
     1201 cgaggtggcg ctcagcgtgc tcctggtcac ggccatgatg gtaccggcgc tcgccgtgca
     1261 caactggaac gccggctgct cggtgctcat ccggtacggc tattggatag cgctcccgct
     1321 gctcgtactc gccctcgagc tcacacaagc gtcactgggg gaaagtcgcc gtggctggtt
     1381 cgtgctggga gtcacgctgg cgctcgggtt cggcgtgatg gtttcgaacg gcgtcaccgg
     1441 cgaacgctac ggttacctgc gccacacctg gctcgccgag ttcgtgctgc accacgcacc
     1501 cggggcgtac aatcccgtgc ccgagatctt ctccgaacgc acgctcgggg ccgaaaggcc
     1561 gccccgcgac ccgcttcccg tcctttggcc ccgccgcggc acgcccatga agctgctcgt
     1621 gccggaagac gaacccgctc gttccgagcg tctctgtccg gacggcggca acgccgcgag
     1681 cgatcatgtc cacgtcgcga gcggcggctg gctctacctc gacgcgccgt tccgctgtgt
     1741 cccgagcgcg tcgtgacgat cggcgaaagc gtttacggcg cggcttcgcc gctcgtgcga
     1801 gtcgtctcgg gcgcgcgtgc cgcagcgaag ctcggcgcgc ggctacgacg gctgagcggc
     1861 ccgccgggtg cccaattcaa gcgccgattg agcgcgtaat tccaaaatgt gacggcgagg
     1921 atcgcgagcg cgttcgccaa ataacggtcg acgtgccaga cgttgaacag cagattcaag
     1981 agcaggacgt tcagcgccaa tccggccgta caaatcgcgt tgaagccgag aaacctgcga
     2041 aacttgcgct tgaggcccgg ggccgtccgc gcgagctcgc ggaacgtcca cgcgtcgttc
     2101 aagaggaagt tcgtgaggat cgccgtctcc gcgccgatga tcttgctgcg cgtgaggccc
     2161 cagccgagca tgcgcggatc gctcagcaaa aagagcatcc ccatgtcgac cacgacgccg
     2221 gtcccgccca cgatacagaa acggaagagc tgcgagctcg gaagcgtcgc ccagcgcagc
     2281 cgcagcaaat gctggaaata ctgcaaatac agccgagccg tcaccttcga ctcgccttcg
     2341 gcccgttcgc ggaagacgta gccggtctcg ccgatccagc gcacacgacc gcgcgcaacg
     2401 acctcgatca aaatcttgta gccgaggggg ctgagctcga tgccctcgat cgcgctacgc
     2461 cggagcatga agtagccgct catcggatcg gtgagtcgcc cgagcacgcc cggcaggagc
     2521 aacaagccga gcagctgcgc cccgcgcgag aggacgcgcc gcgcggcgct ccagtcgctc
     2581 acgccgcctc cactcacgtg ccggctcgct acggccaaat cggcgccgcg ctcgatctcg
     2641 tcgaataacc cgaggttcgc ctcgacaggg tgctgcatgt ccgcatccat cacgccgatg
     2701 acctcgccgc gcgccgcttg ccagccgcgg atcacggctg tgctgagccc cttctctccc
     2761 tgccgccgca tgagtcgcaa ctgcggatgc gccggcaaaa tcgcctgcac gactttccaa
     2821 gtgccgtcgg ggctgtcgtc gtcga
//
LOCUS       DATIML010001083         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_807333, whole genome shotgun sequence.
ACCESSION   DATIML010001083 DATIML010000000
VERSION     DATIML010001083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_807333"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VLJ38_18620"
     CDS             complement(<1..552)
                     /locus_tag="VLJ38_18620"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU41602.1"
                     /translation="MGNLIGQDDVATQRTDDTPRRSAVRRWVLRPVLPSAREVLVLEG
                     ERWTFGRGEGNSLCLNQAAVSRVHAEIKRRGPSYAIRDLESTNGTFVDGQRVTHASLT
                     NGAVLRLGEWLAVVETHAADEPGPYHLSELAPGIWGGATLGAAVRRLLTYGSSDVPVV
                     LVGRTGSGKERFARALHEAGGALR"
     gene            complement(670..1692)
                     /locus_tag="VLJ38_18625"
     CDS             complement(670..1692)
                     /locus_tag="VLJ38_18625"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HSU41603.1"
                     /translation="MTVASRFLEWFWLRAAERNARAESGVASARVLELIGRAALAIEV
                     AARTERPPEPFAHGGADAVAAELYREAIHWALLAHVELRAPLADANEAVGGDAASSGA
                     VANVSTLLERVDGALLERAAGGSDGVPALRADLRAAYAEFAELEPSAQRKLVERLERA
                     SQVLLEPLGTLQRRLERIWVRRVVHVLGVFVLLGAVLFGGRQISSMHQRSHDLAANAS
                     WTTSSRYPQGGCESPRQECAGGENYFFHSMQENDPWVMFDLGKERRISAVEIDNRLDC
                     CTERANPLVIEVSSDKKKWREVARHTGDFTTMRETFDSVRIRYVKIHVPIPAAILHLS
                     RVRIYP"
     gene            complement(1716..>2408)
                     /locus_tag="VLJ38_18630"
     CDS             complement(1716..>2408)
                     /locus_tag="VLJ38_18630"
                     /inference="COORDINATES: protein motif:HMM:NF021379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2079 domain-containing protein"
                     /protein_id="HSU41604.1"
                     /translation="EKLTYIVKMMGPVLLLPFRHPRTWILFIPPAMFTLLSSGYKPMY
                     QTFFQYTSNYTGYIFFASVITLAWWRESDALLGLRRLRVPAALVAMALTATMYSYSHG
                     AIFQHHNFVGGFRQVQFEVTKDDERHHKDLYELIALIPPTASVAATETEAPHVSNRRF
                     CFTLRFAYEDADYLLMTIDEARSEPTTHQVVQQALATGLYGLVQRKGNFLLWKRGYSK
                     EKNEQGLKLIGL"
BASE COUNT          417 a          815 c          769 g          407 t
ORIGIN      
        1 acgcaaagca ccgccggctt cgtgcaacgc gcgggcgaag cgctccttgc cgctgccggt
       61 tcgtccgacc aacacgacgg gtacgtcgga cgagccgtac gtcaacagcc ggcgcacggc
      121 ggcgccgagc gttgcgccgc cccaaatccc cggtgcgagc tcgctcaggt ggtacggacc
      181 gggctcgtcc gccgcatgcg tctcgacgac ggcgagccac tccccgagcc tgagtacggc
      241 accgttcgtc aagctcgcgt gcgtcacgcg ctgcccgtca acgaacgtcc cgttcgtgct
      301 ctcgagatcc ctgatcgcgt aggacggccc gcgccgcttg atttcggcgt gaacgcggga
      361 aacggcagcc tgattcaagc agagggagtt gccctcaccg cgaccgaacg tccagcgctc
      421 gccttcgagc acgagcacct ctcgcgcgct cggcaacacg ggccggagca cccagcgtcg
      481 tacggcactg cggcgcggcg tgtcgtccgt gcgttgcgtc gcaacgtcgt cttgcccgat
      541 cagatttccc attcgacccg agccggtccc acagcggcta tccgccttag catagcccga
      601 gcctcgcagc gtttgccaga tggtcgtctg tgccgtctcg gcaacgacgg acggcagacg
      661 ccgcgcggat tatgggtaga tccgcacccg cgataggtgc agaattgccg caggtatggg
      721 gacgtggatt tttacatagc ggatgcgcac ggagtcgaac gtttcgcgca tggtcgtgaa
      781 gtcccccgtg tgacgcgcga cctcgcgcca cttcttctta tcgctgctca cctcgatcac
      841 gaggggattc gcccgctcgg tgcagcagtc gagccgattg tcgatttcga ccgcagaaat
      901 gcgccgctcc ttgccgaggt cgaacatgac ccaggggtcg ttctcctgca tgctgtgaaa
      961 gaagtagttt tcaccaccgg cgcactcctg ccgcggcgac tcgcaaccac cctgcggata
     1021 acgtgagctc gtcgtccagc tcgcgttagc cgccagatcg tgcgagcgtt ggtgcatcga
     1081 cgagatctgc cgcccgccga agagcaccgc gccgaggagc acgaagacgc cgagcacgtg
     1141 cacgacgcgc cgcacccaaa tccgctcgag ccggcgctgc agggtgccga gcggttcgag
     1201 caacacctgc gaggcgcgct cgagcctttc cacgagcttt cgctgcgcgc tcggctcgag
     1261 ctccgcgaat tctgcgtacg ccgcacgcaa gtccgcccgc agcgccggga ctccgtcgct
     1321 accgccggcc gctcgctcga gcaacgcgcc gtcgacacgt tcgagcaacg tagagacgtt
     1381 cgcgacggcg ccgctcgagg cagcatcgcc gccgacggct tcattggcgt cggcgagcgg
     1441 cgcgcggagc tcgacgtggg ccaggagggc ccagtggatc gcttcgcgat agagctccgc
     1501 cgccacggcg tccgcgccgc catgggcgaa gggctcgggc ggacgctccg tgcgggccgc
     1561 cacctcgatc gcgagcgcgg cccgtccgat gagctcgagc acgcgcgcgg acgccacccc
     1621 cgattcggcg cgcgcgttcc gctccgcggc gcgcagccaa aaccactcca aaaatcgtga
     1681 agccaccgtc accaccgcta gggttttagc acagctcaaa gcccgatgag cttcagcccc
     1741 tgctcgttct tttccttgct gtagccccgc ttccacaaga ggaagttgcc ctttctttgc
     1801 acgagtccgt agagacccgt cgcgagcgct tgctgcacga cctggtgcgt cgtcggttcc
     1861 gagcgcgcct cgtcgatcgt catgagcaag tagtccgcgt cttcgtaggc gaagcgcagc
     1921 gtgaagcaga agcgccgatt cgacacgtgc ggcgcctccg tctcggtcgc ggccacggat
     1981 gcggtcggcg ggatgagagc gatgagctcg tacagatcct tgtggtgccg ctcgtcgtcc
     2041 ttggtgacct cgaattggac ttggcggaag ccgcctacga agttgtggtg ctggaagatc
     2101 gctccatggc tatagctgta catcgtcgcc gtgagcgcca tggcgacgag cgccgcgggg
     2161 acccgcaggc gacgcagacc gagtagcgcg tcgctctcgc gccaccatgc gagcgtgatc
     2221 accgaagcga agaagatgta accggtgtag ttcgacgtat actgaaagaa cgtctgatac
     2281 atcggcttgt agcccgacga aagcagcgtg aacatcgcgg gcgggatgaa cagaatccag
     2341 gtgcgcgggt gccggaaagg caagagcagc accggtccca tcatcttgac gatgtaggtg
     2401 agtttttc
//
LOCUS       DATIML010001084         3367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2247842, whole genome shotgun sequence.
ACCESSION   DATIML010001084 DATIML010000000
VERSION     DATIML010001084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2247842"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /locus_tag="VLJ38_18635"
     CDS             complement(<1..873)
                     /locus_tag="VLJ38_18635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU41605.1"
                     /translation="MVTEAGEEGKPLAAAAITVLVVDDEKNIRRTLGMVLDGDGYNVL
                     EAESGEQALELLSRAGRPIDLAILDLKLPGMGGLQVLERLRAEEATRELPVIVVSGHA
                     TVQDAVLAIKLGATDFFEKPLSRERVLVSVGNSVRTARLTRAVTQLRAELETRYEMIG
                     TSASMQRLYQQIDRVAPTRASVLITGESGTGKELVSRAIHRLSPRRDEPFVRVNCAAI
                     PRELIESELFGHERGAFTGAQTRKRGFFEQAHGGTLLLDEIGDMALVAQAKVLRALQN
                     GEIVRLGSEQSVKVD"
     gene            complement(904..1758)
                     /gene="bamD"
                     /locus_tag="VLJ38_18640"
     CDS             complement(904..1758)
                     /gene="bamD"
                     /locus_tag="VLJ38_18640"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HSU41606.1"
                     /translation="MRLVPACPAFRALALSLAAVAPLTWVGCAGEERAPLSALEYAQN
                     ARTKYEQGLRELEAENWEGATEVFNELKKKYGYSRYARLAELRLADADLAQDKYAEAV
                     TGFKSFVHDYPNDPEVPYARYRVAKAQYESVSQSVLMPPLEERDLAAVNDALVSIRQF
                     LTDYPSSVYSDQLRYMRAVVVGLLARHELYVARFYLGRGKFDAAVARCEHALDAFDHS
                     GLEAEAMVLLGETYMKQKQREKARAVFQRVLKEYPASPFVEPARRFLVALGPGPVAPS
                     TPPASRVD"
     gene            1936..2391
                     /gene="greA"
                     /locus_tag="VLJ38_18645"
     CDS             1936..2391
                     /gene="greA"
                     /locus_tag="VLJ38_18645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HSU41607.1"
                     /translation="MTPAGAQKLREELHRLKEERPKISREIGIAREHGDLSENAEYHA
                     AKERQGLVEARLKDIEDKLARAEVIDPTKLSGDRVRFGATVTLTNLDNDEQSTYQIVG
                     ADEADINQGLISISAPLARALIGKSIGDEVVVQLPAGTRRYEIGDITFK"
     gene            2489..>3367
                     /locus_tag="VLJ38_18650"
     CDS             2489..>3367
                     /locus_tag="VLJ38_18650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41608.1"
                     /translation="MIRRLGISVVAAAALVFGEVVAVLALSHRQVASIWEADMGLALL
                     APTLLALALVLGLAGAGLDALFRDESTSGRGVFTAVAAGAGGAVAWGVGGGRHLATLG
                     TRGGLALLVALLVGPATFFALPRLRRFARERPGAFALLVAVEILVLELVNRFVLVRLY
                     PVFHLALALACVLAAPLAALALAGPNQRGTTWRAWLAPLALAALGTILVPVSARHLAR
                     FDNFRLTLLDAAPIGRLAVELAALVAPPPAVEPPSCDAPGTCLERAPNTNGERALDLQ
                     GRDILLVTVDALRADHV"
BASE COUNT          508 a         1170 c         1129 g          560 t
ORIGIN      
        1 gtccaccttg acgctctgtt ccgaaccgag ccgcacgatt tccccgttct gcagcgcgcg
       61 gagcaccttg gcctgcgcga cgagcgccat gtcgccgatc tcgtcgagca agagggtacc
      121 gccgtgcgct tgctcgaaga acccgcgctt gcgcgtctga gcgcccgtga acgcgccgcg
      181 ctcgtgcccg aagagctcgc tttcgatgag ctcgcgcggg atcgcggcgc aattgacgcg
      241 cacgaacggc tcgtcgcgcc gtgggctcaa gcgatgaatc gcgcggctca cgagctcctt
      301 accggtgccg ctctcgcccg tgatgagcac gctcgcgcgc gtgggcgcga cgcgatcaat
      361 ctgctggtac aagcgctgca tcgaggcgct cgtgccgatc atttcgtagc gcgtctcgag
      421 ctcggcgcgg agctgcgtga cggcgcgtgt gagccgcgcg gtgcgtaccg agttgccgac
      481 gctcacgagc acgcgctcgc ggctgagcgg cttctcgaag aagtccgtgg cgccgagctt
      541 gatcgcgagc acggcgtctt gcaccgtggc gtgcccgctc acgacgatga ccggcaactc
      601 gcgcgtggcc tcctcggcgc gcagcctttc gagcacctgc aagccgccca tgcccggcag
      661 cttcaaatcg aggatggcca gatcgatcgg acgaccggcg cgcgacaaga gctcgagcgc
      721 ttgctcgccg gactcggcct cgagcacgtt gtagccgtcg ccgtcgagca ccatcccgag
      781 ggtgcgccgg atgttcttct cgtcgtccac cacgagcacc gtgatggctg ccgccgcgag
      841 cggcttgccc tcttcacctg cctccgtgac catcaaccca cgaggctaat gcggcgaagg
      901 gcgctagtcc acgcgggagg caggcggcgt ggagggggcg acgggccccg gcccgagcgc
      961 caccaaaaag cgccgtgccg gttcgacgaa cggactcgct ggatattcct tgagcacgcg
     1021 ttgaaacacg gcgcgcgcct tctcgcgctg cttttgcttc atgtacgtct cgccgagcag
     1081 caccatcgct tctgcctcga ggcccgagtg atcgaaggcg tcgagggcgt gctcgcagcg
     1141 cgcgacggcg gcgtcgaatt tgcctcggcc gaggtagaag cgagcgacgt agagctcgtg
     1201 gcgcgcgagc agcccgacga ccacggcacg catgtaccgc agctggtcgg agtaaaccga
     1261 gctcggatag tcggtgagaa actggcgaat gctgacgagc gcgtcgttga cggccgcgag
     1321 atcgcgctcc tcgagcgggg gcatcagcac cgactgactc accgattcgt actgagcctt
     1381 ggcgacgcgg tagcgtgcat acggcacctc cggatcgttc gggtaatcgt ggacgaagga
     1441 tttgaagccc gtgaccgctt cggcgtactt gtcctgcgcg agatcggcgt cggcgagccg
     1501 gagctcggcg agtcgcgcgt aacggctgta gccgtacttc ttcttcagtt cgttgaagac
     1561 ttccgtcgcg ccttcccagt tttcggcctc gagctcccgc aggccctgct cgtatttcgt
     1621 acgagcgttc tgcgcatact cgagcgcgct gagcggtgcg cgctcctcgc cggcgcagcc
     1681 aacccaagtg agaggagcga ccgcggcgag gctcaacgcg agcgcacgga acgcggggca
     1741 ggcgggcacg agacgcatgg gcagcgcctt cgctacccgc ttggcgtggc gaacgcaagc
     1801 ccgtgtccct gcaaaatacg gccgattctg gcgcgctcac gcgccgatgc ctctactcga
     1861 gcccgtcccg aaggtttgcc ctagcagccg agccggcctc gggggtaaac atcgggtgtg
     1921 atcgagaagg ttcccatgac gcccgctggt gcgcagaagc tccgcgaaga gctgcatcgg
     1981 ctcaaggaag agcgtcccaa aatttcgcgc gaaatcggca tcgcccgcga gcacggcgat
     2041 ctcagcgaaa acgccgagta ccacgccgcc aaagaacggc agggcctcgt cgaggcacgg
     2101 ctcaaggaca tcgaggacaa gctcgcccgc gccgaagtca tcgatccgac gaagctcagc
     2161 ggtgatcggg tgcgcttcgg cgcgacggtg accctcacga acctcgacaa cgacgagcag
     2221 agcacgtacc aaatcgtggg tgccgacgag gccgacatca atcaagggct gatctcgatc
     2281 tcggcgccgc tcgcgcgcgc cctgatcggc aagagcatcg gcgacgaggt ggtggtgcag
     2341 ctcccggccg ggacgcgccg ctacgagatc ggcgacatca ccttcaagtg accgtagcgc
     2401 ttggccgctc acgccgatcg agcgctggtc ttccaagagc gccaaacttg agcctaccgc
     2461 tctcggccgc gcccgcgcac cttcacgcgt gatccgccgg ctcggcatct ccgtcgtcgc
     2521 ggctgcggcg ctcgtcttcg gcgaagtcgt cgccgtgctc gcgctttcgc accggcaagt
     2581 cgcgagcatt tgggaagcgg acatgggcct cgcgctgctc gcgccgacgc tgctagcctt
     2641 ggcactcgtg ctcgggctgg ccggcgcggg gctcgacgca ctctttcgtg acgagagcac
     2701 gagcgggcgg ggtgtcttca cggccgttgc ggcgggtgct ggcggcgccg tggcttgggg
     2761 agtcggcggc ggacggcacc tggcgacgct cgggacgcgc ggtggactcg cgctgctcgt
     2821 cgcgctcctg gtcggtcccg cgacgttctt tgcgctgccg cggctgcgcc ggttcgcgcg
     2881 cgagcgaccg ggcgccttcg cgctgctcgt cgccgtcgaa atcctggtgc tcgagctcgt
     2941 gaatcgcttc gtgctcgtgc gtctgtatcc ggtgtttcac ctcgcgctcg cgctggcgtg
     3001 cgtgctcgcc gcgccgttgg ccgcgctggc gctcgcggga ccgaatcagc gaggcacaac
     3061 gtggcgcgct tggctcgcgc cgctcgcgct cgccgccctg gggacgatcc tcgtgcccgt
     3121 gtcggcgcgg catctcgctc gcttcgacaa cttccgactg acgctcctcg acgcggcgcc
     3181 gatcggccgc ctcgccgtcg agctcgccgc cctcgtcgcc ccgcctcccg ccgtggaacc
     3241 gccgtcctgc gacgctcccg gcacgtgcct cgagcgcgct ccgaacacga acggcgaacg
     3301 cgccctcgac ctgcagggcc gcgatatcct actcgtgacg gtcgacgctc tgcgcgccga
     3361 tcatgtc
//
LOCUS       DATIML010001085         1707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5430752, whole genome shotgun sequence.
ACCESSION   DATIML010001085 DATIML010000000
VERSION     DATIML010001085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5430752"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1707
                     /locus_tag="VLJ38_18655"
     CDS             <1..>1707
                     /locus_tag="VLJ38_18655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSU41609.1"
                     /translation="ADKTTKFDMYADFSEPIAKVPSHRFLAIRRGEEEGVLRSSLELE
                     LEPHFPYAASRIPIKKDSPFRDELELVVKDAIDRIVAPSVTVDVRIELKLRSDQEAIR
                     VFAQNLRELLLAAPLGGKSVLGIDPGQRTGCKCAVVDETGKLVAHETIYLVQGGAALE
                     KARETLQRLCKEYTPRAIAVGNGTHGRETEAFVREVLSAEGLTETFCVSVNEAGASVY
                     SASEVARDEFPELDLTVRGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVSQVALGQ
                     KLDEVVESCVNSVGVELNTASAWLLSRVAGIGLTLAKRIVQHRNEKGRFRSRQALLDV
                     SGLGPRTFEQAAGFLRLRDGEHPLDASAVHPERYTLVEKMAADLGVPLASVIGNAALL
                     RRIDLSRYHGADVGEFTLKDILSELDKPGRDPRQSFEPPKFRDDVRELSDLRVGMELE
                     GVVTNITAFGAFVDVGVHQDGLVHVSELASRFVKDPSEVVKVGDRVKVRVLEIDLPRK
                     RIALSIKRAAAPLAQTSPPPARAEGPRPQKSGAPQHKSGPAHKGGGHAPAKPASTPFN
                     NPF"
BASE COUNT          307 a          558 c          588 g          254 t
ORIGIN      
        1 gccgacaaga cgaccaagtt cgacatgtac gccgatttct cggagccgat cgcgaaggtg
       61 ccgtcgcatc gcttcctcgc gatccggcgc ggcgaagagg agggcgtgct gcgctcctcg
      121 ctcgagctcg agctcgaacc gcattttccg tacgcggcct cgcgcattcc gatcaagaag
      181 gattcgccat ttcgcgacga gctcgagctc gtcgtcaaag acgccatcga tcgcatcgtg
      241 gcgcccagcg tgacggtcga cgtgcggatc gagctcaagc tgcgctcgga tcaggaagcc
      301 attcgcgtct ttgcgcaaaa cctgcgggag ctcttgctgg cggcgccgct cggcggaaag
      361 agcgtgctcg gtatcgatcc agggcagcgc acgggctgca aatgcgcggt cgtcgacgaa
      421 acgggcaagc tcgtcgccca tgaaaccatc tacctcgtgc aaggcggcgc tgcgctcgag
      481 aaggcgcgtg aaacgctgca acggctctgc aaagagtaca cgccgcgtgc gatcgcggtc
      541 ggcaacggca cgcacgggcg ggaaaccgag gcgttcgtgc gcgaagtctt gtccgccgaa
      601 gggctgacgg agacgttttg cgtgtcggtc aacgaggccg gcgcgagcgt ttactcggcg
      661 agcgaggtcg cgcgcgacga atttcccgag ctcgatctca cggtgcgtgg cgcgatcagc
      721 atcgcgcggc gcttgcagga tccgctcgcc gagctcgtga aggtcgaccc gaagagcatc
      781 ggtgtcggcc agtaccagca cgacgtatcg caggtcgcgc tcggccaaaa actcgacgaa
      841 gtcgtggaaa gctgcgtcaa cagcgtcggg gtcgagctga acaccgcgag cgcttggctg
      901 ctctcgcgcg tcgcgggcat cggcctgacg ctcgcaaaac gcatcgtgca gcaccgcaac
      961 gaaaagggac gcttccgttc gcgtcaggcg ctgctcgacg tgagtggact cgggccgcgg
     1021 acgttcgagc aggccgcggg ctttttgaga ctgcgtgacg gtgagcaccc gctcgacgcg
     1081 agcgccgtgc acccggagcg ctacaccctc gtcgagaaga tggcggccga cctcggcgtg
     1141 ccgctcgcct cggtgatcgg caacgccgcg ctactccgcc gcatcgacct gtcgcgctac
     1201 cacggcgccg acgtcggcga attcacgctg aaggacatcc tgagcgagct cgacaagccg
     1261 ggccgcgacc cacgccagag cttcgagcca ccgaagttcc gcgacgacgt gcgtgagctc
     1321 tcggatctac gcgtaggcat ggagctcgaa ggcgtggtca cgaacatcac ggccttcggg
     1381 gcgttcgtcg acgtgggcgt gcaccaggac ggcctcgtgc acgtctcgga gctggcgtcg
     1441 cggttcgtga aggatccgtc ggaggtcgtc aaggtcggcg atcgcgtgaa ggtgcgggtg
     1501 ctcgagatcg atctgccgcg gaagcgcatc gccctcagca tcaagcgcgc ggcggcgccg
     1561 ctggcgcaga cgagcccgcc gccggccaga gccgaaggcc cgcggccgca gaagagcggc
     1621 gcgccccagc acaagagcgg gccggcgcac aagggcggag gtcacgcgcc ggccaagccg
     1681 gcgagcacgc cgttcaacaa cccgttc
//
LOCUS       DATIML010001086         2595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3977279, whole genome shotgun sequence.
ACCESSION   DATIML010001086 DATIML010000000
VERSION     DATIML010001086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3977279"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VLJ38_18660"
     CDS             complement(<1..306)
                     /locus_tag="VLJ38_18660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41610.1"
                     /translation="MHLEVEACDSLDATSITRIFAADLGTPLTAAVGADVTEVSIGCE
                     GEHVVVHVKDPLSRKSVRRSFDPKSFGNQGQSRLIAIAASELVLASWAELAENPTPRV
                     "
     gene            421..1221
                     /gene="dapF"
                     /locus_tag="VLJ38_18665"
     CDS             421..1221
                     /gene="dapF"
                     /locus_tag="VLJ38_18665"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HSU41611.1"
                     /translation="MEPLSFVKYEGAGNDFLVVDAPSERFVSAERAVALCDRHFGVGG
                     DGVLLVLPASDPAARARMVVLNADGSRPEMCGNGLRCVALHLARRDEAARASYVLETD
                     AGARTAEVERNGLSAQITQGMGRGQLGGVKRFPVKGVEREFFLVDMGNPHAVTFGAPL
                     TEAELDVVGPAFAATQPQGANVEIVTPVEGRLEVLVWERGVGRTLACGTGAAGVAVAA
                     AATGLTRFGEPVEVRLPGGSLYVTVEEGSLTATMRGPARWVFSGQVGA"
     gene            1218..>2595
                     /locus_tag="VLJ38_18670"
     CDS             1218..>2595
                     /locus_tag="VLJ38_18670"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41612.1"
                     /translation="MSSSATALIVVGIVADEAARALLERTLASSGDELTITDTLADGL
                     ARVSTEVPDVALIDVALGQNAGLAVIHHIRALAPQVAIYALTHQSRLELGSAAMALGA
                     TGVLVMPLTGDDVLTSLASLRTRRAEQEHVREVERRVQVLRAESRLFARVAELAECDT
                     RREASEKLLEALAASGARRALVYLPAAEGARELLRASASHPDPEAPAFCEELELLAFA
                     ERRGLRVLRLALRRELGGLLLVDGLLEALAPDVRETALATLASQCAATLGLIAAREDA
                     HRGGMKDPRSSAYTFAYFVDVAGREIDMARRHRRRFALATISVQPRAQAAPDAVDPTL
                     STVEQVLSAVRDTDVLARVDANEFYLLLPETNGLGAHACRRRVLDRLLAAPGSQRYDT
                     GVGVAVYPHDGGDLSRLLRAARHRAEVCRVSVVERLGLRALGLAQIVDALLAEPPGRP
                     GAPMGVEAP"
BASE COUNT          363 a          886 c          954 g          392 t
ORIGIN      
        1 cactcgcggc gtcgggtttt cggctagctc ggcccagctt gcgagcacga gctccgacgc
       61 cgcgatcgcg atcagtcgtg actgcccttg gttgccgaac gacttggggt cgaaagagcg
      121 tcgcacgctc ttgcgactga gcgggtcctt cacgtgcacg acgacgtgct cgccctcgca
      181 gccgatactg acttcggtta cgtcggcccc gaccgcggcc gtcagcgggg tgccgagatc
      241 ggcggcaaag atgcgggtga tactcgtcgc gtcgagcgag tcgcaggcct cgacctcaag
      301 gtgcaccagg ggcggattag cccaggcaac atgcgtccac agggcgagga ccgctccgag
      361 gaggctcgcg acgacccgcc acacgccctc atgataggct agaagagctt actggccacg
      421 atggaaccgc ttagtttcgt caaatacgaa ggggcgggta acgacttcct cgtggtcgat
      481 gcgccgtcgg agcgcttcgt ctccgccgag cgggcggtgg ccttgtgtga ccggcacttc
      541 ggggtcggtg gcgacggcgt gctcctcgtg ctgccggcga gcgacccggc ggcgcgcgcg
      601 cgcatggtcg ttctgaacgc cgacggttcg cggccggaga tgtgcggcaa cggcttgcgc
      661 tgcgtggcgc ttcacctcgc gcggcgggac gaagccgccc gagcctcgta cgtgctcgaa
      721 accgatgcgg gcgcgcgtac cgccgaggtc gaacgcaacg gactttcagc ccagatcacc
      781 caaggaatgg gccgggggca actcggcggg gtgaagcgct tccccgtgaa gggcgtggag
      841 cgcgaatttt ttttggtgga tatgggcaat ccgcacgcag tgaccttcgg ggcgccgctc
      901 accgaagccg agctcgacgt ggtcgggccg gcatttgcgg cgacccagcc gcagggcgcg
      961 aacgtcgaga tcgtcacgcc cgtcgaaggc aggctcgaag tgctcgtgtg ggagcggggg
     1021 gtcggtcgga cgctcgcgtg cgggacgggc gcggccgggg tggcggtcgc cgcggcggca
     1081 accggactca cgcgcttcgg cgagcccgtc gaggtgcggc tccccggcgg gagcctctac
     1141 gtgaccgtcg aggaaggaag cctgacggcg acgatgcgag gccccgcacg ctgggtcttc
     1201 tcggggcagg tgggggcgtg agttcgagcg cgaccgcgct catcgtggtc ggcatcgtgg
     1261 ccgacgaggc ggcgcgggcg ttgctcgaac gtaccctcgc gagctcgggt gacgagctca
     1321 ccatcaccga cacgcttgcg gacggactcg cgcgcgtctc cacggaagtg cccgacgtcg
     1381 cgctcatcga cgtggcgctc ggccaaaacg cagggctcgc cgtgattcac cacattcgcg
     1441 cgctcgcgcc gcaagtcgcg atttacgcgc tgacgcatca gagccggctc gagctcggga
     1501 gcgcggcgat ggcgcttggc gcgacgggcg tgctcgtgat gccgctcacg ggcgacgacg
     1561 tgctcacgtc gctcgcgagc ttgcggacgc gccgcgccga gcaagagcac gtgcgcgaag
     1621 tggagcggcg cgtgcaggta ttgcgcgccg agtcgcggct cttcgcgcgc gtggcggagc
     1681 tcgccgagtg cgacacgcgc cgcgaggcga gcgagaagct gctcgaagcg ctcgcggcct
     1741 cgggcgcgcg gcgagcgctc gtctacttgc cggccgccga aggcgcgcgc gagctcttgc
     1801 gcgcgtcggc gagccacccg gacccggaag cgcccgcttt ttgcgaggaa ctcgagctac
     1861 tcgccttcgc ggagcggcgt ggtctgcgcg tgctccggct ggcgctccgg cgcgagctcg
     1921 gcgggctctt gctcgtggac ggcttactcg aagcgctcgc gccggacgtg cgcgaaacgg
     1981 cgctcgcgac gctcgcctcg cagtgcgccg cgacgctcgg actcatcgcg gcgcgcgagg
     2041 acgctcaccg cggcggcatg aaggatccgc gctcgagcgc gtacacgttc gcctacttcg
     2101 tcgacgtcgc agggcgcgag atcgacatgg cgcggcggca tcggcgacgc ttcgcgctcg
     2161 cgaccatcag cgtgcaaccg cgcgcgcagg cggcccccga cgccgtcgat ccgacgctca
     2221 gcacggtcga acaggtgctc agcgccgtgc gcgacaccga cgtgctcgcg cgcgtggacg
     2281 ccaacgaatt ttacctactt ttgcccgaaa ccaacggcct gggcgcccac gcctgccggc
     2341 gccgcgtgct cgatcgactg ctcgccgctc ccggcagtca gcgttacgat acgggcgtcg
     2401 gcgtcgccgt ctacccgcat gatggcggcg atctgtcgcg gctcctgcgc gcggcgcgtc
     2461 accgcgccga ggtgtgccgc gtctccgtcg tcgagcgcct gggactccgg gcgctcggtc
     2521 tcgcgcagat cgtcgacgcg ctgctcgccg agccgccggg tcgcccgggc gctccgatgg
     2581 gggtcgaagc gccgc
//
LOCUS       DATIML010001087         1678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2537821, whole genome shotgun sequence.
ACCESSION   DATIML010001087 DATIML010000000
VERSION     DATIML010001087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2537821"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1474)
                     /gene="mgtE"
                     /locus_tag="VLJ38_18675"
     CDS             complement(86..1474)
                     /gene="mgtE"
                     /locus_tag="VLJ38_18675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HSU41613.1"
                     /translation="MQLARLIGPDLLALAEENPAEVAELVDEIHPEDVAQIVAELEDE
                     QARSLLTALPTDYAAQVLARLDEERQGRLAELLGARSVAAIATEMPADDRADFFSVLP
                     DSVGDPAFEELERVAPQAAEEVEEIQSFPEKSAGRWMTTDYIAVDATLRLGVAIEEIR
                     SKAADAETVETIYVTDQPGHLVGTLSLRQLLLSKPNELVSEVMHGNPIAVPSDMDQEE
                     VAKLIAKYDLHTLPVVDPQGSLLGVITSDDVLDVIREETAEDMEKMGGMEALDAPYLK
                     IAFGRMVKKRASWLAALFLGEMLTATAMAYFEDEIARAVVLAMFVPLIISSGGNSGSQ
                     ASTLVIRAMALDEVKLKDVFRVVRRELATGLVLGTVLGTIGFLRIVIWQTFSPLYGQH
                     YMLIAITVFGSLVGVVTFGTLAGAFLPFTLRRLGFDPASASAPFVATLVDVTGLVIYF
                     TMASIVLHGTLL"
BASE COUNT          280 a          524 c          585 g          289 t
ORIGIN      
        1 aagacggcgc gcgcacggat caagatccga tgtcgagcgc tcggtcgcgt gtaagtcgct
       61 ttgtaggccg ttggcggcct gttcgttaca aaagcgtgcc gtggagcacg atgctcgcca
      121 tcgtgaagta gatgacgagg cccgtcacgt cgaccagcgt cgcgacgaac ggcgccgagg
      181 cgctcgccgg atcgaaaccg agtctacgca gcgtgaaggg caagaatgca cccgcgagcg
      241 tgccgaacgt cacgacgccg accaggctgc cgaacaccgt gatcgcgatg agcatgtagt
      301 gctgcccgta gagcgggctg aacgtctgcc agatgacgat gcgtaaaaaa ccgatcgtcc
      361 cgagcacggt gccgagcacg agtcccgtcg cgagctcgcg cctgacgacg cgaaagacgt
      421 ctttgagctt cacttcgtcg agcgccatgg cgcggatcac gagcgtggag gcttgtgagc
      481 ccgaattgcc gccgctcgaa atgatgagcg gcacgaacat ggcgagcacg acggcgcgcg
      541 cgatttcgtc ttcgaagtag gccatggccg tggccgtcag catctcgccg aggaagagcg
      601 cggcgagcca gctcgcacgc ttcttcacca tgcgcccgaa cgcgattttc aggtacggcg
      661 cgtcgagggc ctccatgccg cccatcttct ccatgtcttc cgcggtctct tcgcgaatga
      721 cgtcgagtac gtcgtcggac gtgatgacgc ccagcagcga gccctgcggg tcgacgacgg
      781 gcagcgtgtg caaatcgtac ttggcgatga gcttcgcgac ttcttcctgg tccatgtcgg
      841 agggcacggc aatggggtta ccgtgcatga cttcgctcac gagctcgttc ggcttggaca
      901 agagcagctg ccgcaaactg agcgtgccga ccaagtgtcc cggctggtcg gtgacgtaga
      961 tggtctcgac cgtctcggcg tcggccgctt tggagcggat ctcctcgatg gcgacgccga
     1021 ggcgcagcgt cgcgtcgacg gcgatgtagt ccgtcgtcat ccagcggccg gcggactttt
     1081 cggggaagct ctggatctcc tcgacttcct cggcggcttg cggcgcgacg cgctcgagct
     1141 cctcgaaggc tggatcaccg accgagtcgg gcagcacgct gaagaagtcg gcgcgatcgt
     1201 cggccggcat ctcggtcgca atcgcggcga ccgaacgcgc gccgaggagc tcggcgaggc
     1261 ggccctgacg ctcttcgtcg agacgcgcga gtacttgcgc ggcgtagtcg gtggggagcg
     1321 cggtgagcag gctgcgcgcc tgctcgtctt cgagctcggc cacgatctgc gccacgtctt
     1381 cggggtggat ctcgtcgacg agctcggcga cctcggccgg attttcctcg gccaaggcaa
     1441 gcaggtcggg tccgatgagc cgcgcgagtt gcatggggaa cgcggccgat gctacgcgtt
     1501 cctccgccgg gcagcagcga acttgctcgt gatgttgccg aaacgtcgtc gggcggcgtg
     1561 aaatcgcggg cggtgtgccg ctactccccg gcagcggggc ggagtgaatt ggccggccgg
     1621 ctttcgagca aggcgccctc gcggagtagg cccttgccgc gcagggcacc gggcggcg
//
LOCUS       DATIML010001088         3766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5142333, whole genome shotgun sequence.
ACCESSION   DATIML010001088 DATIML010000000
VERSION     DATIML010001088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5142333"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1143)
                     /locus_tag="VLJ38_18680"
     CDS             complement(<1..1143)
                     /locus_tag="VLJ38_18680"
                     /inference="COORDINATES: protein motif:HMM:NF016584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0007275 - multicellular organism
                     development [Evidence IEA];
                     GO_process: GO:0030178 - negative regulation of Wnt
                     signaling pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dickkopf N-terminal cysteine-rich
                     domain-containing protein"
                     /protein_id="HSU41614.1"
                     /translation="MAGAVALATTACGRSKHHTTPHAGGSGRGAGGKAGAAASGGSSG
                     AHAGASAGGAAGSGGTGDEHGAGEAGASGASEAGGAGAPAGAGGANEAGGSGDAGGGG
                     SDDLGTTKVTDVDSFRRAQYDALCRYVFGCDEPDSELQSLRLSLRTEQRCREVFEDSA
                     LRAPAFDDLDAKVRAGTIEMDLAAVPACIDSLVRCEPESTKRFYDGLPCRAVFRGSSP
                     LGGACSRAEDCANDARCVIGAACPGVCTARVPLGQSCESEADCDDHAGPATCADVGTS
                     NASALTCEPLAIHRGAANETCSPGTFEMADLLLCAEGLFCDETSGTCRPPLPADSNCD
                     SDDDVCADGQFCRNGRCQVVSVQEHVGDDCDEDYIKVCDFFSRLYCV"
     gene            1352..2707
                     /locus_tag="VLJ38_18685"
     CDS             1352..2707
                     /locus_tag="VLJ38_18685"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HSU41615.1"
                     /translation="MLSGCRRVSDERRATASATPASAASTVRYPASSAALPATSATAT
                     PPSAGSAAAPRVALNVLLITIDSLRADVPWLGYARPIAPNLTHLAETSVVYTRAYSAS
                     SYTAKSLAAVLSGRFASTLYRDGRFFARYAPANVFLGEILHDNGVRSIAWHSHLYFGR
                     ESGLEQGFDVWRLVPGIHFDPETDNDVTSDKMTALGIELLSDPKNTSGRFVAWAHYMD
                     PHDQYHAHPEAPDFGKHARSRYDQEIWFTDFWIGKLLAWAEQQPWWKDTVLIVTADHG
                     EAFGEHGMYKHAFELWDVLTHVPLLVHGPGLAPRRIDQRRSAIDLAPTILEFAGIAPP
                     ADFEGQSLVAELGGAEPASREPILLELSEDTHNPPRRALIQGNYKLIDFGHDHFELFD
                     LAGDPSESTDIAAKHPAELRALKQALAAKYETMPTVAPFGGQKLHDGGRANGAQGPRP
                     R"
     gene            2881..>3766
                     /locus_tag="VLJ38_18690"
     CDS             2881..>3766
                     /locus_tag="VLJ38_18690"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41616.1"
                     /translation="MTSGRVIADKYRLLHELGRGGMGTVWAAQHLSLGTHVAVKLIDR
                     QSPSPSALRRFEQEAHAAARLRSPHVVQVLDYGVDGKTPYLVMELLEGASLSSRLGRD
                     GLLPPAETWIVVSHVVQAISRAHEEGFVHRDLKPDNVFLVEGGDELLVKVLDFGTAKA
                     LLGPDLALTKTGAMLGTPAYACPEQIAGGEVDTRADLWSLGVMTFECLTGILPFTGSS
                     LKGLLTAICREPIVVPSDIADVPEGFDAWFARAVERDRDERFQTARELREALRPLIGP
                     GAKRPWVGPLDGDTLPLKP"
BASE COUNT          635 a         1345 c         1200 g          586 t
ORIGIN      
        1 cacgcagtac aagcgcgaga agaagtcgca aaccttgatg tagtcttcgt cgcagtcgtc
       61 gccgacgtgc tcctgcacgc tcacgacttg gcaacgtcca ttgcgacaaa attgtccgtc
      121 ggcgcaaacg tcgtcgtccg agtcgcaatt cgagtcggcg ggcaatggtg ggcgacaggt
      181 gccgctggtc tcgtcgcaga acagcccttc agcgcagagc aacagatccg ccatctcgaa
      241 cgtaccggga ctgcaggtct cgtttgcggc gccacggtgg attgcgagcg gctcacacgt
      301 gagcgcggaa gcattcgagg tgccgacatc ggcgcaggtc gcgggcccgg catggtcgtc
      361 gcagtcggct tccgactcgc agctctggcc gagcggcacc cgcgccgtgc agacgccggg
      421 gcaggccgcg ccgatcacgc agcgcgcgtc gttggcgcag tcctcggcgc gcgaacacgc
      481 gccgccgagc ggggacgagc cccgaaagac cgcgcggcac ggcagtccgt cgtagaagcg
      541 tttcgtgctc tccggctcac aacgcacgag cgaatcgata cacgccggca cagccgccag
      601 gtccatctcg atcgtgccgg cgcgcacctt ggcgtcgaga tcgtcgaacg caggcgctcg
      661 aagggccgag tcctcgaaca cctcgcgaca gcgctgctcg gtgcgcaacg acaaacgtag
      721 gctctggagc tcgctgtccg gctcgtcgca gccaaagaca taccgacata aggcgtcgta
      781 ttgagcacgc ctgaaactat cgacgtcggt gactttggtc gtgccgagat cgtcagagcc
      841 gccgccacca gcgtccccgg agcctccggc ttcgtttgcg ccaccagcgc ctgcaggcgc
      901 tccagcaccg cccgcttcgc ttgcgccgct cgcgcccgct tccccggcgc cgtgctcgtc
      961 accagttcct cccgaaccag ccgcgccgcc cgcgctagcg cccgcatgcg cgccgctcga
     1021 accaccggac gctgccgcgc ccgccttgcc gcctgcgcct cggcccgagc cgccagcgtg
     1081 cggtgtcgtg tgatgcttgc ttcggccaca cgccgtagtc gcaagcgcaa ccgctcccgc
     1141 catgcagagg atcctcgcaa actgcgccat acgaaacctc ccgaaagaac gttaagaccg
     1201 acccgacgct cgagtttagc acgacggcga ccatcgaccg gtatgacgtt ccgatccgcc
     1261 gcccaaggga atgcacggca cgcgtggtaa aactcgcagc ttgacgcttc gctctcctgt
     1321 tttcccgatc gccctctggg ctttgctcct ggtgctttcc gggtgtcgcc gagtctcgga
     1381 cgagcggcgt gcgacggcat ccgcgacccc ggcaagcgcg gcgagcacgg ttcggtaccc
     1441 cgcgagcagt gcagcactgc ccgcgacgag cgctaccgcg acgcccccga gcgcgggcag
     1501 tgccgcggca ccgcgcgtag cgctgaacgt cctgctcatc acgatcgaca gcttgcgcgc
     1561 cgacgtgccg tggctcgggt acgcgcggcc catcgcgccg aacctgacgc acctcgcgga
     1621 gacgtcggtc gtgtacacgc gcgcctattc ggcttcgagc tacacggcga agagcctcgc
     1681 ggccgttctc agcgggcgct ttgcgtcgac gctctaccgc gacgggcgct tcttcgcgcg
     1741 ttacgcgcct gccaacgtgt ttctcggcga gatcctgcac gacaacggcg tgcgaagcat
     1801 cgcgtggcat tcccacctgt atttcggccg tgagagcgga ctcgaacaag gcttcgacgt
     1861 gtggcggctc gtgcccggta tccatttcga tccggaaacg gacaacgacg tgacgagcga
     1921 caagatgacc gcgctcggca tcgagctcct ctccgatccc aagaacacga gcggtcgctt
     1981 cgtcgcctgg gcccactaca tggacccgca cgaccagtat cacgcccacc ctgaagcacc
     2041 cgatttcggc aaacacgcgc gcagccgcta cgaccaggaa atctggttca cggatttttg
     2101 gatcggcaag ctcctcgcct gggccgagca gcaaccctgg tggaaagaca ccgtgctcat
     2161 cgtcacggcc gaccacggcg aagccttcgg tgagcacggc atgtacaagc acgccttcga
     2221 gctctgggac gtgctcacgc acgtgccgct cttggtgcac ggcccgggcc ttgctcctcg
     2281 ccgcatcgac cagcggcgct ccgccatcga tctcgccccc accatcctcg agttcgccgg
     2341 gatcgcaccc cccgcggact tcgaaggcca gtcgctcgtc gccgagctcg gcggcgcgga
     2401 gcccgcgtcg cgtgaaccca tcttgctcga gctcagtgag gacacgcaca acccgccgcg
     2461 gcgcgcgctc atccagggca attacaaact catcgacttc ggacacgacc acttcgagct
     2521 gttcgatctc gccggcgatc cgagcgagag caccgacatc gccgccaagc acccggcgga
     2581 gctccgagcg ctgaagcaag cgctcgccgc caagtacgaa acgatgccga ccgttgcgcc
     2641 gttcggcgga cagaagctcc atgacggcgg gcgcgcgaac ggggctcagg gaccgcgacc
     2701 gcgctgagca ggcgaagctc gagccgccag cgagtgcgac gatgtgctcc atgctccgcg
     2761 ggttcatcac gtccctcacg cgggctcggg tgaagcgggc cccgacgcga acgcgaaaat
     2821 cggggcagag gctcgtggca gagtgccttc gcgcggcttc cgcgttagcc tcgtgcacga
     2881 gtgaccagcg gacgtgtcat cgcggacaag tatcggctcc tgcacgagct cgggcgcggc
     2941 ggcatgggca ccgtctgggc cgcccaacac ctgagcttgg gcacgcacgt ggccgtcaag
     3001 ctcatcgacc ggcagtcgcc gagcccgagc gcgctccgtc gtttcgaaca agaggctcac
     3061 gccgccgcca ggctcagaag cccgcacgtc gtgcaggtgc tcgactacgg cgtcgacggg
     3121 aagactccgt acctcgtgat ggaactgctc gaaggcgcga gcctgagcag ccggctcggg
     3181 cgcgacggcc tgctccctcc ggccgagacg tggatcgtcg tgagccacgt cgtgcaggcg
     3241 atcagccgcg cgcacgagga aggcttcgtt caccgcgatc tcaagccgga caacgtgttc
     3301 ttggtcgaag gcggcgacga gctcttggtc aaggtgctcg atttcggcac cgccaaggcg
     3361 ctgctcgggc cggatctcgc gctcacgaag acgggcgcga tgctcggcac gcccgcctac
     3421 gcctgcccgg agcaaatcgc gggcggcgag gtcgacacgc gcgccgatct ctggagcctc
     3481 ggcgtgatga cgttcgagtg cttgaccggc atcttgccgt tcacgggctc gtcgctcaaa
     3541 ggcttactga cggcgatttg tcgcgagccg atcgtcgtgc cttccgacat cgccgacgtg
     3601 ccggaagggt tcgacgcctg gttcgcgcgc gccgtggagc gcgatcgcga cgagcgcttc
     3661 cagacggcac gcgagctcag ggaagcgctc cgtccgctga tcgggcccgg cgccaagcgt
     3721 ccgtgggtcg gtccgctcga cggcgacacg ctgccgctca agccgc
//
LOCUS       DATIML010001089         1996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2248713, whole genome shotgun sequence.
ACCESSION   DATIML010001089 DATIML010000000
VERSION     DATIML010001089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2248713"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VLJ38_18695"
     CDS             complement(<1..322)
                     /locus_tag="VLJ38_18695"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HSU41617.1"
                     /translation="MFRSLHIASTGMSAQETQLEGVANNIANANTAGYKRQRVEFQDL
                     LYQNVREAGAATGPTTMAPNGLQIGTGVRVVGTSREFAEGTFENSGNPLDVAIEGNGF
                     LIVQQ"
     gene            complement(406..639)
                     /locus_tag="VLJ38_18700"
     CDS             complement(406..639)
                     /locus_tag="VLJ38_18700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41618.1"
                     /translation="MCVFKRLLGPILFALFVSGLGTLDGCGSQSCLRNSDCGSHLACH
                     KGECIDPNAPSQPADAAAPNGEGGGGGDAATSR"
     gene            complement(626..1165)
                     /locus_tag="VLJ38_18705"
     CDS             complement(626..1165)
                     /locus_tag="VLJ38_18705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41619.1"
                     /translation="MPLRSPPSRPALKLCVIFSTIAGASLLARPAHAEGYMYETYFGI
                     GSGLEGGDAGTGTLGWQRARLRLSGGLDLRDAEDPVQGFGFRGAVELEKRGSIGGELR
                     YSRWLGRGFGGFIGVTGTVAPETLLGGVAGATLVIPLGKRMGLFIEPSLSAFPLGSDL
                     PGDSVLIWGLLTVGINVRL"
     gene            complement(1223..>1996)
                     /locus_tag="VLJ38_18710"
     CDS             complement(1223..>1996)
                     /locus_tag="VLJ38_18710"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU41620.1"
                     /translation="IPEALLESELFGHARGAFTGAHAAKLGRLAQADGGTLFLDEIGE
                     LPLALQVKLLRVLQAREYSPVGDTRTLSADVRIVAATNIDLEEAARNGTFREDLYYRL
                     NVIHLAAPPLRDRAEDIPALAGFFLERARTKAGRDRVTKISRQAAEMLCSYGWPGNVR
                     ELENTIERAVLLSGGSVIEPRDLPPRLQGFGTTEARTGPRLGERGVDLRKAVETFENH
                     LIRQALEKTNWNKKRAAELLGINRTTLVEMLKRKRIEAA"
BASE COUNT          320 a          649 c          688 g          339 t
ORIGIN      
        1 tttgctggac gatcaagaag ccgttgccct cgatcgccac gtcgagcggg ttgcccgagt
       61 tttcgaaggt gccttccgcg aactcgcgcg aggtgccgac cacgcgcacg ccggtgccga
      121 tttgcagtcc gttcggcgcc atcgtcgtcg ggccggtggc cgcgcccgct tcgcgcacgt
      181 tttggtagag cagatcttgg aactcgacgc gctggcgctt gtagcccgcg gtgttcgcgt
      241 tggcgatgtt gttggcgact ccttcgagct gagtctcttg ggccgacata cccgtggaag
      301 cgatgtggag cgatcgaaac atggcgctct tgcctctgta gcaatccgga tgccagtccg
      361 gattcgcggg tgcggagcgc gcgcgccggc gctaatgccg tgcgatcagc gcgacgtcgc
      421 agcgtcaccg ccgccgccac cctcgccatt tggcgctgcg gcgtcagccg gttgactcgg
      481 cgcgttcgga tcgatgcact cgcccttgtg gcacgcgagg tgactgccgc agtcggagtt
      541 gcgcaggcag ctctgggagc cacagccgtc gagcgtgccg aggccgctga cgaagagcgc
      601 gaacaggatc ggaccgagga ggcgtttaaa gacgcacatt gatgccaacc gtgagcagac
      661 cccagatgag cacggaatcg cccggcaaat cgctgccgag cgggaacgcg gaaaggctcg
      721 gctcgatgaa caagcccatg cgtttgccga gcgggatcac gagcgtcgcg cccgcgacgc
      781 cgccgagcag cgtctccggc gcgacggtgc ccgtgacgcc gatgaaccca ccgaaaccac
      841 gtccgagcca gcgcgaatag cggagctcgc cgccgatgct gccgcgcttt tcgagctcga
      901 ccgcgccgcg aaagccgaag ccttgcactg gatcctctgc gtcgcgcaaa tcgagcccgc
      961 cgctcaggcg caggcgtgcg cgctgccagc cgagcgtgcc cgtgccggca tcgccgccct
     1021 cgagacccga gccgatcccg aagtaggttt cgtacatgta gccctcggca tgcgccggac
     1081 gcgccagcaa actggcaccg gcgatggtcg agaagatgac gcacagcttg agcgctgggc
     1141 gactcggcgg gctacgtagc ggcacgtggg gaccatgagc aagccgtggg ccaagcccct
     1201 agtctcgagc acaagttgtc gctcacgccg cttcgatgcg cttgcgcttc agcatctcga
     1261 cgagggtcgt gcgattgatg ccgagcagct ccgcggcgcg cttcttgttc caattcgtct
     1321 tttcgagcgc ctgacggatc aggtggtttt cgaacgtttc gaccgccttg cgcaggtcga
     1381 cgccgcgctc gccgagccgc ggacccgtgc gcgcttccgt cgtgccgaag ccctggagtc
     1441 gcgggggcag atcgcggggc tcgatcacgg agccgccgct caggagcacg gcgcgttcga
     1501 tcgtattttc gagctcgcgc acgttgccgg gccagccgta cgagcagagc atttcggcgg
     1561 cttgtcgcga gatcttcgtg acgcggtcgc ggccggcctt ggtgcgcgct cgctcgagaa
     1621 agaaaccggc gagggcgggg atgtcctcgg cgcggtcgcg caggggcggc gccgcgaggt
     1681 gaatcacgtt gagccggtag taaagatcct cacggaacgt gccgttgcgc gcggcttcct
     1741 cgagatcgat gttcgtcgcg gcgacgatgc gcacatccgc gctcaaggtg cgcgtgtcac
     1801 ctacgggaga atattcccgg gcttgcagca cccggagcag cttgacctgt agcgcgaggg
     1861 gcagttcgcc gatttcgtcg agaaacagcg tgccgccgtc cgcctgggcg aggcgtccga
     1921 gcttcgcggc gtgggcgccc gtgaatgcgc cgcgagcatg accgaagagc tcgctttcga
     1981 gcagcgcctc gggaat
//
LOCUS       DATIML010001090         1903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4271444, whole genome shotgun sequence.
ACCESSION   DATIML010001090 DATIML010000000
VERSION     DATIML010001090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4271444"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..900)
                     /locus_tag="VLJ38_18715"
     CDS             complement(<1..900)
                     /locus_tag="VLJ38_18715"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSU41621.1"
                     /translation="MNRGRIRIDTLAALLLALFAVTRPSFAEPAVFESPELERFQLSN
                     GLDVVLERNHRQPRVAVAMSYDVGSRDDPPGYAGLAHLVEHLTYRGSRHLGSYQGDEL
                     LETAGVAEMNGVTQADRTVYYAVVPAGALELVLFIESERMAFTLEAFNENSFRLERSI
                     VTNELRLRDRVQARFEASVRQCLYGEDHPYSRFAYERAELDHLGLSDAMWFFQAGYRP
                     DRAHLVVVGNFEPSVVKALIARMFGPVQSPVTPALVRPALKPPAVLARRVEFLSRSFF
                     DLLVEARPAPRPGASAHVAAEIFA"
     gene            complement(1161..1658)
                     /locus_tag="VLJ38_18720"
     CDS             complement(1161..1658)
                     /locus_tag="VLJ38_18720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41622.1"
                     /translation="MRKIDHVLASLVAAGVLLLGRTALADTATGRDPDAHPHYFFEAE
                     PHALVGLFEPRAFGVGFRGTFVLSDSGFIRGVNDTVGLGVGIDWTHDTTWVPIVLQWN
                     FWVSQHWSVFAEPGVAMRWRNQFENLDADPTLYGGARWQFAPGVALTMRVGYPAFALG
                     FSFLL"
BASE COUNT          369 a          615 c          638 g          281 t
ORIGIN      
        1 cgcgaagatc tcggcggcga cgtgagcgct tgcgcccggc cgtggtgcgg gacgggcctc
       61 gaccaacagg tcgaagaaac tccgcgataa aaactcgacg cgccgcgcga gaaccgccgg
      121 cggcttgagc gcgggccgga cgagcgccgg cgtgacgggg ctctgcactg ggccgaacat
      181 gcgtgcgatc agtgccttga cgacgctcgg ctcgaagtta ccgacgacga ccaagtgagc
      241 gcgatccgga cgatagccgg cttggaagaa ccacatggcg tcggagagcc ccaggtggtc
      301 gagctcagcg cgttcgtagg caaacctcga gtacggatga tcttccccgt agaggcactg
      361 cctcacggac gcttcgaatc gcgcctgcac gcgatctctc agcctgagct cgttcgtgac
      421 gatcgagcgt tcgagcctga acgagttctc gttgaacgct tcgagcgtga aggccatgcg
      481 ttcactctcg atgaagagca caagctcgag cgctcccgcg gggacgaccg cgtagtagac
      541 cgtgcgatcc gcctgggtga ctccgttcat ttcagcgacg cccgcggttt cgagcagctc
      601 gtcgccctga taggaaccga ggtgtcgcga cccgcgatac gtgaggtgct cgacgaggtg
      661 ggcgagcccg gcgtagccgg gcggatcgtc gcgcgaaccc acgtcgtagg acatcgcgac
      721 cgcgacgcgg ggttgccggt ggttccgttc gagcacgacg tcgagcccgt tcgagagctg
      781 aaagcgctcg agctccggcg attcgaagac ggcgggctcc gcgaagctcg gccgcgtgac
      841 ggcaaacagg gcgagtagga gggcagcgag cgtatcgatt cggattcgtc ccctgttcac
      901 actcggacgt gccacgcgca tgcttgcaga atacgcgact tttgcgcagg ccggcagccc
      961 cgaggacgca cggaccggac cacgggaacg cacgtcgggc actcgccgct acttcgctcc
     1021 gagcttccac gaaataccga gccgagctcg gcctctccac cgctaaccgc ggcagtgtat
     1081 gtcgttaccg ctccctcgag cgtccgacca gcgggcggga acacccaagc accacgtttg
     1141 gttcggccgg cttcgctccc tcacaagagg aaggagaacc cgagcgcgaa cgccggatag
     1201 ccgacgcgca tcgtcagggc cacgccgggc gcgaactgcc agcgcgcgcc gccgtaaagc
     1261 gtcggatcgg cgtcgaggtt ttcgaattgg ttgcgccagc gcatggcaac gcccggttcg
     1321 gcgaacaccg accaatgctg actcacccag aagttccatt gcagcacgat gggcacccaa
     1381 gtcgtatcgt gcgtccaatc gataccgacg ccgaggccga cggtgtcgtt cacgccgcgg
     1441 atgaacccgg aatcggagag cacgaacgtg ccgcggaagc cgacgccgaa cgcgcgaggc
     1501 tcgaacaagc cgacgagcgc gtgaggctcc gcctcgaaaa agtaatgggg gtgcgcatcg
     1561 gggtcgcgac cggtcgccgt atccgcgagc gcagtacgac cgagcagcaa gacgcccgca
     1621 gcaacgagag acgctaagac gtggtcaatc tttcgcatgg cgcagggctc aagcaaagag
     1681 cacgccgcgg ctgaaaaacc gacgaatctg cgcgagccga tgtggcgcgt tgtgacggct
     1741 ggggcgtcct ggcattttgg cggcggctcc gcgtgtatgc tgcgccccat gaccgacacc
     1801 agcgcatggg gcccgctcgc cgctctcatc ggcgagtggg aaggcagcga aggcagcgac
     1861 gtttcgttcc acaacgcgac cgggcgcatc gcagagacgc cct
//
LOCUS       DATIML010001091         5938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1096404, whole genome shotgun sequence.
ACCESSION   DATIML010001091 DATIML010000000
VERSION     DATIML010001091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5938
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096404"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(734..2164)
                     /locus_tag="VLJ38_18725"
     CDS             complement(734..2164)
                     /locus_tag="VLJ38_18725"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU41623.1"
                     /translation="MLEIGQVLHEKYRIDRLVGKGGMGQVFEGFHLLIGRRVAIKILL
                     PEVAASEAGNARFAAEARAAASINNPHILDVLDAGALPDGSRFMVSEFLDGEPLEARV
                     SRGRLTAEETAVITLQLLDGLAAAHRAGITHRDLKPDNIFLSRKTDRHDLVKIIDFGI
                     SKFAPSADEAARMTTTGVVLGTPQYFSPEQARGERTVDPRSDLYSVGAIMYRCVAGHV
                     PFAADTIHALLFRIALQNAPPLAAIVRGLDPAFSALTEKAMAKDPAARFQTADEMSHA
                     LKVWLDRSHRGAEARADTLKLASESDGTSTSGAVPLPTSDSFELAGMTPPFAGQARKR
                     VTLVVALGLGVLLVGAILLTLRRPLSSAPGTIEDTSSRAPAPSAPTSQNAAAADTPLA
                     PSSEPSAPNELPPAAPTAPKSGASDGAASASNPPSAAPPTTASPARKPAQRRSHPSEA
                     QRPSSSAAPPAPKPSATAHPRRDFGY"
     gene            complement(2294..3661)
                     /locus_tag="VLJ38_18730"
     CDS             complement(2294..3661)
                     /locus_tag="VLJ38_18730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41624.1"
                     /translation="MQTNTFADGSVPRAGSSVEQLSDVELLASTRRLVGRSNQLLAEL
                     LVHLAEVEARGIHRTRACSSLYTYCVYELRFSEDEAFRRVAAARLVRRFPALLDALAS
                     GELHLTGLLMLGPHLTEANLAHVLARAKHRTKHELARLVRILDPLPAVPARIEPLGPE
                     PARLVPPEPTWQAFVESTCPVRELAPGDRPREWIASANDSGASSPEQGRKVMGADDSG
                     GQSEGGGQSEGDGYSACDHRAERARVAAPERVDSTPSERLESERYKVQFTATEEYVRL
                     VDEAKALLSHAVPNLTLEELQMRAMRALVSHLKKKKYATVESSPAGAPDPETMRALPQ
                     CASRTRRERTDALDDGAERPNPRRRRRRVRHIPAAVRRTVFERDGNRCSYLDANGTRC
                     PETHRLEFHHLKPFAVGGDHHPSNLTLRRAAHNAFAAEQDFGRELIEHRKASLRHEPF
                     GRSGE"
     gene            4239..5081
                     /locus_tag="VLJ38_18735"
     CDS             4239..5081
                     /locus_tag="VLJ38_18735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41625.1"
                     /translation="MARSLAKLGRLVEAHEAYLKVVSEQLPADAPKAFKSAHVEAEDE
                     IGGVEARLAHVTVTVRGRGAATAALRIDQADVPAAEQGIPIPMDPGAHVFSARTGELQ
                     SDERTVTLREGGKASVELTLRYAAASNSATPVGSNQSSGATSNAPQPDGTQANKHGSA
                     RRIVAYSSFGLAAVGAGVGAYFAASAFRFRHDANTLHDACDSKFEGCSPDDKVIVTEH
                     ENKADKARNWTIGLYAATAVALGTGIVLLATEPRSPTGRAFGPIRTLRVAAGFASLTA
                     AGEF"
     gene            complement(5085..5411)
                     /locus_tag="VLJ38_18740"
     CDS             complement(5085..5411)
                     /locus_tag="VLJ38_18740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41626.1"
                     /translation="MARLDRVEASLAHVTDVLVLQSERMDIGFASLREELQANRRELR
                     GMSEQTRLMAEQTRLMAEQTRSMAEQVHGLREETRATREETRAMRETLTDRLDRLIET
                     YEGAVS"
     gene            5553..>5938
                     /locus_tag="VLJ38_18745"
     CDS             5553..>5938
                     /locus_tag="VLJ38_18745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41627.1"
                     /translation="MRRSNVRTVVVSLVLLTSASFGCSEVASNGASDPGGERDVASGR
                     ALRAGFTPERLEPAAWYVASAKDFAVAGDGTVRWTDRSGHARNATHPSASGAPELVEN
                     GWFGAPTVHFDGTRCLSTAPWTSAPIG"
BASE COUNT          905 a         1861 c         2146 g         1026 t
ORIGIN      
        1 gcacgcgttg ccgcaggcgt gcgtactccc tgggcaggcg caggttccgc tcgagcagag
       61 ctggtcggcc gtgcaggtct gacaggcgtg gccctttgag ccgcaggcct ggggcgtcgg
      121 cgacgtgacg cacgtgccgt cgctggcgca acaacccgag caattgccgg gcccgcaagc
      181 gccgtcgccc ccattgcccg agcccgcatc ttctggcgaa cccccattag cattctcgac
      241 gcccgcgagt gacggattcc gcccggaggc gccgcctgca ccggatttcc cgccggtcat
      301 ctgaggtgag ccgccgctat tttgcaccga gctgccgcca gtcgcagcgc cgcccggagt
      361 gcctcccccg acctgcgagc tcccgcccat cgcgtcactc gccccgcctc gaccagcgtt
      421 accgctcgct ccgcccgccg ccgcccccgc cgcccccgct gcgtgacggt gatcccgata
      481 cgtgacgtgc gtcgcgcagc tcggaatcac gagcgtgccc attcccacga tccaccctgc
      541 gcttactcgg ctcattttcg gtctccgcga ggacttagta ccatgctggc ctgatcagag
      601 gcgcgcgtcg gcgcgcggcg ttcttttagg tgacgcggcc gagacgcgtg gtcgcaccgt
      661 ctggggtcgg gcggcgcgcg gtggcagttg cgtgattttt tggggggagc tcagcaggct
      721 gcagctgggc cgctcagtag ccgaagtccc tccgagggtg cgccgtggcg ctcggtttcg
      781 gggcgggggg cgcggcgctc gaggaggggc gttgcgcctc ggaagggtgt gaacgccgct
      841 gggcaggctt gcgtgcaggc gacgcggtcg tgggcggggc tgcactcggt gggttcgaag
      901 ccgacgctgc tccgtcgctg gcgcccgatt ttggtgcggt gggcgcggcc gggggaagtt
      961 cgttcggcgc tgagggctcg gacgagggtg cgaggggggt gtcggcggcc gcggcgttct
     1021 gggatgtcgg cgcggagggt gcgggcgcgc gactcgaggt gtcctcgatc gtcccgggcg
     1081 ctgaactcag cgggcgacgg agcgtcagca ggattgcgcc aacgaggagc acgccgagcc
     1141 caagagcaac gacgagggtg acgcgtttgc gcgcctgccc ggcgaacggc ggggtcatgc
     1201 ccgctaactc gaagctgtcc gacgttggca gcggaacagc ccccgaggtg ctcgtgccgt
     1261 ccgactccga cgcaagcttg agcgtgtctg ctcgcgcctc ggcgccgcgg tgggaacggt
     1321 cgagccagac tttgagggcg tggctcattt cgtccgcggt ctgaaagcgc gctgctggat
     1381 ctttggccat cgctttttcc gtcagtgcgg aaaaggcggg gtccaggccg cgaacgatgg
     1441 cggcgagcgg tggagcgttt tggagggcga tcctgaagag taaggcgtgg atagtgtcgg
     1501 ccgcgaaggg cacgtggccg gcgacgcagc gatacatgat ggcgcccacc gagtagaggt
     1561 cgctgcgcgg gtcgacggtg cgctcgccgc gcgcctgctc gggggaaaag tattggggcg
     1621 tgccgagcac gacgcccgtc gtggtcatgc gcgctgcttc gtcagcgctc ggcgcgaatt
     1681 tcgagatgcc gaaatcgatg attttgacga ggtcgtggcg gtcagtcttg cggctcagga
     1741 aaatgttgtc gggcttgaga tcacgatgcg tgatgcctgc gcgatgcgcg gcggcgagcc
     1801 cgtcgaggag ctggagggtg atgacggccg tttcttcagc cgtgaggcgg ccgcgcgaca
     1861 cgcgagcttc gagcggctct ccgtcgagaa actcgctgac catgaagcgc gacccatcgg
     1921 gcagtgcgcc agcgtcgagg acgtcgagaa tgtgagggtt gttgatgctc gccgcggcgc
     1981 gtgcttcggc cgcgaagcga gcgttgccgg cttcggaagc cgcgacctcg gggagtaaga
     2041 tcttgatcgc gacgcggcgc ccgatcaaga ggtgaaatcc ctcgaaaacc tggcccatgc
     2101 cgcccttacc gacgagccgg tcgatgcggt acttttcgtg gaggacttgg ccgatctcga
     2161 gcatggcgcg gcgcgagcgg gaggttacac cgaagctcgc ttcggtctag cgcaggcgca
     2221 ggagaaaggc cgaaccacgc tggcgcagcc attggtctga actaccgcgc ctccccacga
     2281 cgcccgggag atgtcattcc cctgaacgac cgaaaggctc gtgccggagc gaggctttcc
     2341 ggtgttcgat gagctcgcgt ccgaagtctt gttcggcagc gaaggcgtta tgtgccgcgc
     2401 ggcgcagggt cagattcgac gggtggtgat cgccgcctac ggcaaacggt ttcaggtgat
     2461 gaaactcgag gcgatgggtt tcggggcaac gcgttccgtt ggcgtccagg tagctgcagc
     2521 gattgccgtc gcgctcgaag acggtgcggc ggacggcggc gggaatgtga cgcacgcgcc
     2581 ggcgacgccg gcgcgggttc ggtcgctcgg cgccgtcgtc gagtgcgtcc gtgcgttcgc
     2641 gacgcgttct cgaagcacac tgcggcaggg cacgcatggt ttccgggtcg ggcgctcctg
     2701 cgggcgagct ctcgacagtg gcgtacttct tctttttgag gtgtgacacg agagcacgca
     2761 tggcgcgcat ttgaagctcc tcgagcgtca agttcggaac ggcgtgtgag agcagtgcct
     2821 tcgcctcatc gacgaggcgg acgtattcct cagtcgcggt gaattggacc ttgtagcgct
     2881 cggattcgag gcgttccgag ggagtcgaat ccacccgctc cggcgcggcg accctcgccc
     2941 gctccgcacg gtggtcacac gcgctgtagc cgtcgccctc gctctgcccc ccgccctcgc
     3001 tctgcccccc gctgtcatcc gcacccatca cttttcggcc ctgttcgggc gaacttgcgc
     3061 cggagtcatt cgcgctcgcg atccattccc gaggtcggtc gccgggcgcg agctctcgga
     3121 cgggacaagt cgattcgaca aacgcttgcc aagtgggctc gggcggcacg agccgcgccg
     3181 gctcgggacc gagcggttcg atgcgcgcag gaacggcagg caaaggatcg aggatgcgca
     3241 cgagtctggc gagctcgtgc ttggtccgat gcttcgcgcg agcgaggaca tgggcgaggt
     3301 tcgcctccgt gaggtgcggg ccgagcatga gcagccccgt gaggtggagc tcgccggagg
     3361 ccagagcgtc gagcaacgcc gggaagcgcc tgacgagacg agcggcggca actcgtcgga
     3421 aggcctcgtc ctccgaaaag cggagctcgt aaacgcagta ggtgtagagg ctcgagcagg
     3481 cgcgcgtgcg gtgaatgccg cgcgcttcga cttcggcgag gtggacgagg agctcggcga
     3541 gtagttggtt cgagcgacct acgaggcggc gggtcgaagc gagaagctcg acgtccgaga
     3601 gctgctcgac cgaagagccg gcacgaggga cggacccatc tgcaaatgtg ttcgtctgca
     3661 tgcgccgcat ggtaagcccg gcttttcgac gctgccgaaa ggcgcgctcg cgagcgatcg
     3721 aggagcgaag cgcgacgcga accgtcgcaa cgagcaagag ctcagcaggg cgtccgctgc
     3781 gcgccgcaag cgcgatgttt cgaggcgtgc gcacgctctc aggggcgtgc gccacgaatt
     3841 ctgtcaaggc aaatcggaga aacgactcgc gcgaccgcgc gatcctcgcg ctgcccccgc
     3901 cgtgcttgtc ccccgacacg tccgccgtgt ccagccggcg gtaggcccga cctgctgtcc
     3961 gccaaaccgg tcggcgctcg agcaccagga gttggaagtc gagctatggt ggcctcgctg
     4021 tgtgttccag ggcttggaga tggatgctcg tgttggcggc ggggctgatg gttgcgtcgc
     4081 caagtttcgc cggtgcggag tcggaccggg accgagcggc agcgcgttcg gcggccgacg
     4141 caggcgccga cgcgttcgac caggggcaat acgagcgcgc aatcgagctt ttcgggcggg
     4201 cggagcagct cgttcatgcg ccgccccacc tcctcttcat ggcgcgatca ttggcgaagc
     4261 tcgggcgact cgtcgaggca cacgaggcgt acttgaaggt cgtgagcgag cagcttccag
     4321 cggatgcgcc caaggcgttc aagtcagcgc acgtagaagc cgaggacgag atcggcggcg
     4381 tggaagcgcg gcttgcgcac gtgacggtga cggtacgagg gcgcggggca gcgacggcag
     4441 cgctgcgcat cgatcaagcc gacgtgccgg cggcggaaca gggcattccg atcccgatgg
     4501 atcccggcgc gcacgtcttt tcggcgcgta ccggcgagct ccagagcgat gagcgcacgg
     4561 tgacgttgcg cgaaggaggc aaggcgtccg tcgagttgac gctgcgctac gctgcggcaa
     4621 gcaacagcgc gacgcccgta gggtcgaatc agtcgtcggg cgccacctcc aacgctcctc
     4681 agccggacgg cacgcaagcg aacaagcacg gttcggcgcg acggattgtc gcgtattcga
     4741 gttttggtct cgccgcggtt ggggctggcg tgggcgcgta ttttgctgcc tcggccttcc
     4801 gcttccgcca cgacgcgaac acgcttcacg atgcgtgtga ctcgaagttc gaggggtgta
     4861 gcccggatga caaagtgatc gtgaccgagc atgaaaacaa ggctgacaag gcgcgcaatt
     4921 ggaccatcgg gctctatgcg gcgactgcgg tagcgctcgg tacgggcatc gttttgcttg
     4981 cgacggaacc tcgctcgcct acgggccgcg cgttcggtcc aatacgaacc cttcgcgttg
     5041 cggcgggctt tgcttcgctg acggccgcgg gggagttttg agcgctagct aactgcgcct
     5101 tcgtacgtct cgatgagccg gtcgagccgg tcggtcaacg tctcgcgcat ggcgcgggtc
     5161 tcttcgcgcg tcgcgcgggt ctcttcgcgc aagccgtgaa cttgttccgc catcgagcgg
     5221 gtctgttcgg ccatgagtcg tgtctgctcg gccatgaggc gcgtctgttc gctcatgcct
     5281 cgtagctccc ggcggttcgc ttgcagctcc tcgcgcaagc tcgcaaaccc aatgtccatc
     5341 cgctcgctct gaagcacgag cacgtccgtg acgtgggcaa gtgaggcctc gactcgatcc
     5401 aggcgcgcca tggagggttc gttcgattct gccataggcg taacccatcg gtcagctgtg
     5461 gcacgagttg ctcggcaatt tcatgtgctt cgcacgcgtg gcttgcgagc gcgcgtcgcg
     5521 gtatcctcgg cgctgcgcgg aggtctctcg caatgcgacg aagcaacgtc cggacggtcg
     5581 tggtgtcgct ggtcttgctg accagcgctt ccttcggttg tagtgaagtt gcgtcgaatg
     5641 gcgcaagcga tcctggcggc gagcgcgacg tggcgagtgg gcgcgcgctc cgcgccggct
     5701 tcacacccga acgtctcgag ccggccgcgt ggtacgtcgc gtcggcgaag gacttcgccg
     5761 tggcgggcga cggcacggtg cgctggacgg atcgcagcgg gcacgcgcgc aatgcgacgc
     5821 acccgtcggc atccggcgcg cccgagctcg tcgagaacgg ctggttcgga gcgcccaccg
     5881 tgcactttga cggcacacgc tgcttgagca cggcgccctg gacgagcgca cccatcgg
//
LOCUS       DATIML010001092         6963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1675674, whole genome shotgun sequence.
ACCESSION   DATIML010001092 DATIML010000000
VERSION     DATIML010001092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6963
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675674"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VLJ38_18750"
     CDS             <1..415
                     /locus_tag="VLJ38_18750"
                     /inference="COORDINATES: protein motif:HMM:NF037775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EscN/YscN/HrcN family type III secretion system
                     ATPase"
                     /protein_id="HSU41628.1"
                     /translation="AITAVYTVLVEGGDLDEPVADEVRGILDGHIVLERAIAARGHYP
                     AIDPVASISRVMGQVTTPEHLSAARHVRGLLAAYEEKRDLVTLGAYVAGSDPRVDLAI
                     RALPEIERWLKQDARESVPFGETLAGLTALARRYA"
     gene            complement(478..1563)
                     /gene="dnaJ"
                     /locus_tag="VLJ38_18755"
     CDS             complement(478..1563)
                     /gene="dnaJ"
                     /locus_tag="VLJ38_18755"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HSU41629.1"
                     /translation="MTEKRDYYEVLCVTREASADDIRKAYRQAALKNHPDRNPGNAEA
                     EVRFKEATEAYSVLSDAEKRAQYDRFGHAGLNGGFDFANAGVGDILSQFQEMFSDFFG
                     GFGGQQGGQRRRSGRGQDVRVHATISLTDAMVGGKHEVVIDGEVPCDTCSGSGAKPGT
                     KPETCPQCRGSGQVTAQRGFIMFSSACARCRGTGSYIATPCETCRGRGALERQRKVLV
                     SFPPGIDTGHRLRVPGQGMPGRSGGPGDLYVDVEVSPHERFERHGDDLASRVEVSFSA
                     AALGTDVELELPDGTEVSAAIAPGTQPSSVVTVRGKGMPRVDRSGRGDLHLVVSVSVP
                     RKLSKQAKKLLQELDAELSKDGERASG"
     gene            complement(1654..3063)
                     /locus_tag="VLJ38_18760"
     CDS             complement(1654..3063)
                     /locus_tag="VLJ38_18760"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSU41630.1"
                     /translation="MPTSSLSSSAALAAFIEPWLSNRRALVFGSALAATPRLLLERGA
                     RLVHVCDPSPLRVAEAAERAAAAGLSFSSFSDETLAGPEGAFDCVLVENLGAFDARAV
                     VARVRRLLAPRGVALFVTPNREATAPLLPVPEPAGTPIDYYALYDLVAGEFEHVRMLG
                     QAPFVGYAVVDFAPESAAEPLIDSEFIPRGSEEPELFIALASRHRAGIGGYAVVQLPL
                     ERVLSGHATSLRAALPAPAPAPAVNALEQKLKQQESWISELEARAETADERADVAEDE
                     LERLREELARKVEVVKMAPPVAAPPAVAPRPIAAPAPDPAWLGERRALTQEIEATRTR
                     VRELEAKLGERDAARAVLEGAIAERDARIEELSRRAKEDAAKEKAAKDDAAKEDPSDV
                     DALERKLIERGHELRRLERDLAEAERLGRELVLDLADARERGGPELREELALIADQLA
                     KSEADRLALNWAAAVTRSS"
     gene            3351..4724
                     /locus_tag="VLJ38_18765"
     CDS             3351..4724
                     /locus_tag="VLJ38_18765"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HSU41631.1"
                     /translation="MLKKTLVVDGLTPVGAYQALRSRSEGGSFLLESVVPGERWGRFS
                     ILGYRPRSHIVLYGEPGRDPFARLAELFPTGEPDDEDVATRFARAAVGMIPYDIVHYA
                     TKVPAWPDSAREPIARLLRDFTAVVFDNLTHTAVIAAHDASDIERAERDLASAPPLDL
                     VAPPDPSAAPPDVDVTMSDEAYGAAVERAKEYIRAGDAFQIVPARTFSTPARGADPFD
                     VYRALRVLSPAPYMYLLEMPAAEGAGPVAIAGASPETLVRVERGRITLRPIAGTKPRG
                     RSREEDEKLAQEMLADPKERAEHVMLIDLARNDVGRVSRAGTVVVPERMFIERYSHVM
                     HITSEVQGELRPGVGPWDVMRATFPAGTLTGAPKVRAMQIIRELETRRRGAYGGAIGY
                     ITCGQDLDLAIAIRTVVLAGDRFEVTAGAGIVADSVPALEAQETRNKARAALAAIHAA
                     RSHRRRG"
     gene            4737..5147
                     /locus_tag="VLJ38_18770"
     CDS             4737..5147
                     /locus_tag="VLJ38_18770"
                     /inference="COORDINATES: protein motif:HMM:NF021193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PGPGW domain-containing protein"
                     /protein_id="HSU41632.1"
                     /translation="MQALHAIADDFLKPDVLIALGIFSIVAVVATAVLVPIVVARMPA
                     DYFVRKSDERRGNPVLVVLKNIAGVLLVLLGVAMLVLPGQGILTLVLGLGLVDFPGRR
                     RLELKVMGRPSVLKAVNALRRRAGRGPLEIPRPE"
     gene            5252..6094
                     /locus_tag="VLJ38_18775"
     CDS             5252..6094
                     /locus_tag="VLJ38_18775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin-like protein"
                     /protein_id="HSU41633.1"
                     /translation="MSFGCDDAEDSPIKRPSGTAGTADVGTGGTPAMASGGSAGLATA
                     GGSGASAGGSGGDASMAGGSSTGGASAMAGAAGSSGGVSAAGGTGGEGTGRAGSGMTA
                     GMSSGGTGTGSSGSNPCAAGSAAGKTFGGHCYLLVTNAKSFQAARNDCMSKQGHLVTI
                     SNGEPPAQETFDAEDTFVYGLAGGKDTWLGLTDGKMDRDPGDGTFYKWITGEASPLEA
                     WGTGYGWQSGEPNNYAKSCMNGDSCYEHCGFMVSDQGDKWNDDLCEATKPYICEWDSL
                     VAPQ"
     gene            complement(6625..>6963)
                     /locus_tag="VLJ38_18780"
     CDS             complement(6625..>6963)
                     /locus_tag="VLJ38_18780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41634.1"
                     /translation="ATARCADCADYRRALCRSDDALCNSDDALCRSDDVLCNSDDALC
                     RSDDALCDCDSAECAGMGATRHARRVASVHLGSCPRWTLRDVSRASSAVPAPVATSRA
                     AARVASRVLA"
BASE COUNT         1059 a         2430 c         2374 g         1100 t
ORIGIN      
        1 agccatcacc gccgtctaca ccgtgctcgt cgaaggcggc gatctcgacg agcccgtggc
       61 cgacgaagtg cgtggcatcc tcgacggcca catcgtgctc gagcgcgcga tcgcggcacg
      121 cggtcactat ccggcgatcg atcccgtcgc gtcgatctcg cgcgtgatgg ggcaggtgac
      181 cacgccggag cacctgagcg cggcgcgtca cgtgcgtggt ctcctagcgg cgtacgagga
      241 gaagcgcgat ctcgtgacgc tcggcgcgta cgtcgcgggc agcgatccgc gggtcgacct
      301 cgcgatccgc gcgctgcccg agatcgagcg ctggctcaag caagacgcgc gcgagagtgt
      361 gccgttcggc gaaacgctcg cggggctcac ggcgctcgcg cgccgttacg cgtagcggcg
      421 ctccgatacg ggccgtgcgt tgtcgttacc gtgccgtgcg tcgccgttgc ggcgcggtca
      481 gcccgacgcg cgttcgccgt ctttcgacag ctcggcgtcg agctcttgca agagcttctt
      541 cgcctgcttg ctgagcttgc gcggaacgct caccgacacg accaagtgca aatcaccgcg
      601 cccgctgcga tcgacgcgcg gcatgccctt gccgcggacg gtgacgacgg agctcggctg
      661 cgtgccgggc gcgatcgccg ccgacacctc cgtgccgtcc ggtagctcca gctcgacgtc
      721 cgtgccgagc gcggcggcgc tgaatgaaac ctcgacgcgg ctcgccaagt cgtcgccgtg
      781 tcgctcgaag cgctcgtgcg gcgacacctc gacgtcgacg tagagatcgc ccgggccgcc
      841 cgagcgcccc ggcatgccct gtccgggcac gcgcaagcgg tggcccgtgt cgatgccggg
      901 cggaaacgag acgagcacct tgcgctggcg ctcgagggcg ccgcgcccgc ggcaagtttc
      961 acacggcgta gcaatgtagc tgcccgtgcc gcggcaacgc gcacacgccg acgagaacat
     1021 gatgaagccg cgttgcgccg tgacttgtcc actgccgcga cactgcggac aggtctcggg
     1081 cttcgtgccg ggtttggcgc cggagcccga gcacgtatcg cacggcacct cgccgtcgat
     1141 gacgacctcg tgcttgccgc cgaccatcgc gtccgtgagc gagatggtgg cgtgaacgcg
     1201 cacgtcctgg ccacggcccg agcggcggcg ctgtccgccc tgctgtccgc cgaagccccc
     1261 gaagaagtcg gagaacattt cctgaaactg gctcaggatg tcgccgacac cggcgttcgc
     1321 gaaatcgaag ccgccgttca gcccggcgtg tccgaagcgg tcgtactgcg cgcgcttctc
     1381 ggcgtccgag agcacactgt aggcctcggt cgcctctttg aatctcacct ccgcctccgc
     1441 attacccgga ttgcggtcgg ggtggttctt cagcgcggcc tgccggtacg ccttccgaat
     1501 gtcgtcggcc gacgcttccc gggtgacgca caagacttcg tagtagtcgc gcttctcggt
     1561 catggggcgg cggcggcgcg catgaagctc aggcgcaacg gggatccgaa cgaggacacg
     1621 acggggcgca acgtaagtcc tctgccggcc atgtcaactg ctccgcgtga ccgcggcggc
     1681 ccaattgagc gccagccggt ccgcctcgct tttggccagc tgatcggcga tgagcgccag
     1741 ctcctcccgg agctcagggc cgcctcgttc ccgtgcgtcg gccaagtcca gcacgagctc
     1801 gcggccgagc cgctccgctt cggcgaggtc gcgctcgagc cggcggagct cgtgcccacg
     1861 ttcgatgagc ttccgctcga gcgcatcgac gtcgctcgga tcctccttcg cggcgtcgtc
     1921 tttggcggcc ttttctttgg ccgcgtcctc tttcgccctg cgcgagagct cttcgatgcg
     1981 ggcgtcgcgc tcggcgatcg cgccttcgag cacggcgcgt gcggcgtcgc gctcgccgag
     2041 tttggcctcg agctcgcgga cgcgcgtgcg ggtggcttcg atttcttgcg tgagcgcgcg
     2101 ccgctcgccg agccaggcgg gatcgggcgc tggtgcggcg atgggccgcg gcgcgacagc
     2161 tggcggtgca gcgacgggcg gggccatttt cacgacctcg acctttcgtg caagctcctc
     2221 gcgcagtcgc tcgagctcgt cttccgcgac atccgcgcgc tcgtcggcgg tctcggcgcg
     2281 cgcctcgagc tcgctgatcc agctctcttg ttgcttgagc ttttgctcga gcgcgttcac
     2341 cgccggtgcc ggtgcgggtg ccggcagtgc ggctcgcagg ctcgtcgcgt gccccgagag
     2401 cacgcgttcg agcggcagct gcacgacggc gtagccgccg atgccggcgc gatgccgcga
     2461 cgcgagcgcg atgaaaagct ccggttcttc gctgccgcgc gggatgaact cgctgtcgat
     2521 cagcggctcc gcagcggact cgggtgcgaa gtccacgacc gcgtagccga cgaacggcgc
     2581 ctgcccgagc atgcgcacgt gctcgaactc gcccgcgacg agatcataga gcgcgtaata
     2641 gtcgatgggc gtgcccgccg gctccggcac gggcaagagc ggagccgtcg cttcgcgatt
     2701 cggcgtgacg aacagcgcga cgccacgcgg agcgagcaag cgacgtacgc gcgcgaccac
     2761 cgcacgcgcg tcgaacgcgc cgaggttctc gaccagcacg cagtcgaagg cgccctcggg
     2821 acccgcgagt gtttcgtcgc tgaagctcga aaaggagagc cctgcggcgg cggcgcgttc
     2881 ggccgcttcg gcgacgcgga gcggcgatgg atcgcagacg tgaacgagcc gggcgccgcg
     2941 ctcgagcaag aggcgcggcg tcgccgcgag cgcgctgccg aacacgagcg cgcgccgatt
     3001 ggagagccac ggctcgatga acgcggcgag cgcggcactg gacgaaagcg agctcgtggg
     3061 catgacgcgt ggcttttatc tccaagctac tcgccccgca atcactcggc ggagaacatg
     3121 cgctcaggac cgcccgttgg cccgagcggc gagacaggat gaacaggaag gcggaagttc
     3181 tgaaaagatc cgaggattgc tctggcgaag tcatgggcgc ctacatcgag gtgcaccgcg
     3241 tccgcgaacg ctgcgtcgcc tcacgctcga gccggccaac cttcctgcct tcccccttcc
     3301 tgtgatcccg agtagacacg ccgaccgagt cgaaccacta ttttcggccg atgctgaaga
     3361 agacgctcgt cgtggacggc ctcaccccgg tcggggcgta ccaggctttg cgcagtcgtt
     3421 ccgagggcgg ctctttcttg ctcgagagcg tcgttccggg cgagcgctgg gggcgctttt
     3481 cgatcctcgg ctaccggccg cgctcccaca tcgtgcttta cggcgagcct ggccgcgacc
     3541 cgttcgcgcg cctggccgag ctcttcccca cgggcgagcc cgacgacgag gacgtggcga
     3601 cgcggttcgc tcgcgccgcg gtcggcatga tcccgtacga catcgtgcac tacgcgacga
     3661 aggtccctgc ttggccggat tcggcgcgtg agcccatcgc gcggctctta cgcgacttca
     3721 ccgcggtggt tttcgacaac ctcacgcaca ccgccgtcat cgcggcgcat gacgcgagcg
     3781 acatcgagcg cgccgaacgc gatctcgcgt ccgcgccgcc gctcgatctc gtggccccgc
     3841 ccgatccgag cgcggcgccg ccggacgtcg acgtcacgat gagcgacgaa gcgtacggcg
     3901 ccgccgtcga acgcgccaaa gagtacatcc gcgccggcga cgctttccaa atcgtccctg
     3961 cgcggacgtt ctcgacgccc gcgcgcggcg ccgatccgtt cgacgtgtac cgcgccctgc
     4021 gcgtgctttc gccggcaccg tacatgtacc tgctcgagat gccggccgcc gagggcgcgg
     4081 gtcccgtcgc catcgccggc gccagtcccg aaacgctcgt gcgcgtcgag cgcggccgca
     4141 tcacgctgcg gcccatcgcg ggcacgaagc cgcgcggccg ctcgcgcgag gaggacgaaa
     4201 agctcgcgca ggaaatgctc gcggacccca aggaacgcgc cgagcacgtc atgctgatcg
     4261 acctcgctag aaacgacgtg ggccgcgtct cgcgcgcggg caccgtcgtc gtgccggagc
     4321 gcatgttcat cgagcgctac agtcacgtca tgcacatcac gagcgaagtg cagggtgagc
     4381 tccgtccagg cgtgggcccc tgggacgtga tgcgcgcgac gtttcccgcc ggaacgctca
     4441 cgggcgcgcc caaggtgcgc gcgatgcaaa tcattcgcga gctcgagaca cgtcgccgcg
     4501 gcgcctacgg cggagccatc ggttacatca cgtgcggcca ggatctcgat ttggcgatcg
     4561 ccatccgcac ggtcgtgctc gcgggcgatc gcttcgaggt gacggccggc gcgggcatcg
     4621 tcgcggacag cgtgcccgcg ctcgaagctc aggaaacgcg caacaaggcc cgcgcggcgc
     4681 tcgccgcgat tcacgccgcg cggtcgcacc gccggcgcgg ctgaagtgga cctcggatgc
     4741 aggcgctcca cgccatcgcc gacgactttt tgaagcccga cgtactgatc gcgctcggca
     4801 tcttctcgat tgtcgcggtc gtggcgacag ccgtgctcgt ccccatcgtc gtcgcgcgca
     4861 tgccggccga ctacttcgtg agaaagagcg acgaacgccg cggcaaccct gtgctcgtcg
     4921 tgctcaaaaa catcgcgggc gtgctgctcg tcctgcttgg ggtcgcgatg ctcgtcttgc
     4981 ccggccaggg aattctcacg ctggtcctcg gcttgggcct cgtggacttt ccgggccgcc
     5041 gtcgcctcga gctcaaggtg atgggccgtc cgtccgtact caaggccgtc aacgctctgc
     5101 gtcgtcgggc cggccgtggg ccgctcgaaa ttccgcgtcc ggagtgaaat gaggagccga
     5161 gccgtcgcgc tggcgcgtgc gctcgcggcc gatgtaaaac tctccgatgc caagcgttgt
     5221 gcgtacgctg cttttacttt ccgcgatccc gttgagcttc ggttgcgacg atgccgaaga
     5281 ctccccgatc aaacgaccgt ccgggaccgc cggcacagcc gacgtcggta cgggcggcac
     5341 gcccgcgatg gccagcggcg gcagtgcggg tctcgcgacc gccggcggca gcggcgcgag
     5401 cgcgggcggc agcggtggtg atgcgagcat ggccggcggc tcgagcacgg gtggtgcgag
     5461 cgccatggcg ggtgccgccg gctcgagcgg cggcgtgagc gcggccggcg gcacgggcgg
     5521 ggagggcacg ggcagggcgg gcagcggcat gactgcgggg atgagctcgg gcggcaccgg
     5581 taccggttcc agcggctcca atccttgtgc tgcggggtcg gcggcaggca agaccttcgg
     5641 cggccactgc tacctgctcg tcaccaacgc caagagcttc caagcggcca ggaacgactg
     5701 catgtcgaag cagggccacc tcgtcaccat cagcaacggc gagccgcctg cgcaagagac
     5761 cttcgacgcg gaggacacct tcgtttacgg cctcgccggc ggcaaagaca cctggctcgg
     5821 cctcacggac ggcaaaatgg atcgcgaccc cggtgacggc accttttaca agtggatcac
     5881 cggcgaagcg agcccgctcg aagcttgggg caccggctac ggctggcaat ccggcgagcc
     5941 caacaactac gccaagtcct gcatgaacgg cgacagctgt tacgaacact gcggcttcat
     6001 ggtttcggat caaggcgaca agtggaatga cgacctctgc gaagccacca aaccatacat
     6061 ctgcgaatgg gactcactgg tggcgccgca atagctccga cccgcgcgcg tgacagcgcg
     6121 cccgcgacca ccacgcgtgg cgctctcctc gacaacgcgc ctctcgaacc cgccctctgg
     6181 accccgcgcc tcacgaacga gtgcccccct acggacgtgc agctcgaggg tattttgaat
     6241 tggtgggcac ggctttcgat tcgacgacac gcgtgtcgta ttcacgacgc ccgccgtgac
     6301 accccgtgac ccacgcccgc cctccagggt tcgggtgggg gcacgcccgc accgctccag
     6361 cgcttttacc attccaacac gaacttcacc cgctccttca tcgaattcgt ttccttccag
     6421 ggcatgcgcg ccactgtcag aaatgtcctc ggattgcacg aaccgagtgt caggcctggc
     6481 ctcggttgat gcccgctcct aagcggactc cgcgtaccac tggccaggcc ggccaaggag
     6541 cgcaggtcgc gttgcgattt cgcacgtggg gaggagctcg gcagggggcg ggacggccgc
     6601 gctcttcacg gcttgtttcg cacctcacgc gagaacgcgt gacgcgacac gtgccgctgc
     6661 acgtgacgtt gcgactggtg cggggactgc cgagcttgcg cggctgacgt cacgcagcgt
     6721 ccagcgcggg cacgagccta aatgcacgga agcaacacgg cgggcgtgac gtgttgcgcc
     6781 catgccagcg cattcggcgc tgtcgcagtc gcacagcgcg tcgtcggagc ggcacagcgc
     6841 gtcgtcggag ttgcacagca cgtcgtcgga gcggcacagc gcgtcgtcgg agttgcacag
     6901 cgcgtcgtcg gagcggcaca gcgcgcggcg gtagtcggca cagtcggcac agcgcgctgt
     6961 cgc
//
LOCUS       DATIML010001093         1675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_808769, whole genome shotgun sequence.
ACCESSION   DATIML010001093 DATIML010000000
VERSION     DATIML010001093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808769"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..815)
                     /locus_tag="VLJ38_18785"
     CDS             complement(<1..815)
                     /locus_tag="VLJ38_18785"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU41635.1"
                     /translation="MSTVIQTPEPTIGLGGTALAAAAPAILVADDDKEMCELAEASLS
                     RRGYKVTWRLSPEEALAELDREDFAVLLIDIHMQGMNGLELCSQALLKRPDAVVVVMT
                     GFGTLEDAIGAMRAGAYDFITKPVSTDALALSVDRAARHRAMNDELKRLRRRVDQHEL
                     PNIVGHSESIRHMADIVERIAETDTSVLITGESGTGKELVARAIHERSGRRGPFLAVN
                     CAALPETLLESELFGHARGAFTDARVARQGLFVEAHNGTLFLDEVGEMPLGMQA"
     gene            1009..>1675
                     /locus_tag="VLJ38_18790"
     CDS             1009..>1675
                     /locus_tag="VLJ38_18790"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSU41636.1"
                     /translation="MAEGEAPRVEAEAPVSAGAAKRLAMLDDLRQAERRAVSSRVASV
                     IAHLIGTPLHVIAGRASLIRSVPGDANVAENARRIEEQVDRLAKRIRALIDYLTAPEP
                     APQEEAVRAVIDTALAVYAPITEARGKTLRLMREVPDANVDGTSALIVLTSLFSLATR
                     VAPQGAIIELAVARLEDGRVAFELGVPGLEPPRGRIDSLEPPEQFEQGRIEELQVLSV
                     CSAI"
BASE COUNT          271 a          551 c          574 g          279 t
ORIGIN      
        1 gcttgcatgc cgagcggcat ctcgccgacc tcatcgagaa agagcgtgcc gttgtgtgct
       61 tcgacgaaca ggccctggcg cgcgacgcgc gcatcggtga aagcgccgcg cgcatgaccg
      121 aagagctcgc tttcgagcag cgtctcgggc agcgcggcgc agttgacggc gaggaacggc
      181 ccgcgccgtc cgctgcgctc gtgaatcgct cgcgccacga gctccttgcc cgtcccgctc
      241 tcacccgtga tgagcacgct cgtatcggtt tcggcgatgc gctcgacgat atccgccata
      301 tgccgaatcg actcgctgtg accgacgatg ttcggcagct cgtgctgatc gacgcggcgg
      361 cgcaggcgct tgagctcgtc gttcatcgcg cggtggcgcg cggcgcgatc gacgctgagg
      421 gcgagcgcgt cggtggagac gggcttggtg atgaagtcgt aagcgccggc gcgcatcgcg
      481 ccgatggcgt cttcgagcgt gccgaagccc gtcatcacga cgaccacggc gtcgggtcgc
      541 ttgagcagcg cctggctgca gagctcgagc ccgttcattc cctgcatgtg aatgtcgatg
      601 agcaagacgg cgaagtcttc tctatcgagt tcggcgagcg cctcctcggg cgacaggcgc
      661 caagtgactt tgtaaccgcg acggctgagg ctcgcttcgg cgagctcgca catctccttg
      721 tcgtcgtcgg cgacgaggat tgcgggtgcc gcggcggcca aagcggtgcc gccgaggcca
      781 atcgtaggct cgggagtctg gatgacggtg gacatcgggc ctccgcgaat gcacgctgtg
      841 tgcccgtgta cgcgtcgcac agaacccctc gaaattccgt ggttttgttg cacagcgccg
      901 tggcagtttg cgacatggcg tggcaaatcg cctcggacga aagcgccact tgggccagcc
      961 ggcctatcgg ccagaagacg tacggcacgc tacaatggag ggtcagcaat ggctgaggga
     1021 gaggcgccca gggtcgaagc agaggcaccg gttagtgcgg gcgcagccaa gcgtctcgcg
     1081 atgttggacg atctccggca agccgaacgg cgcgccgtga gttcccgcgt ggcctcggtc
     1141 attgcgcatc tgatcgggac gccgctgcac gtcatcgccg gtcgagcctc actgatccgc
     1201 agcgtcccag gcgacgccaa cgtggcggaa aatgcccgac gcatcgagga gcaggtcgat
     1261 cggctggcca aacggattcg tgcgctcatc gactatttga ccgcgccgga gccggctccg
     1321 caggaggaag ccgtccgcgc ggtcatcgac accgccctcg cggtgtacgc ccccatcacc
     1381 gaagcgcgcg gcaagaccct tcgcctcatg cgcgaggtgc ccgacgcgaa cgtcgacggc
     1441 acctccgcgc tgatcgtgct cacgagcttg ttctcgcttg cgacgcgggt cgcgccccag
     1501 ggcgcgatca tcgagctcgc cgtggcgcgc ctggaggacg gccgcgtcgc cttcgagctc
     1561 ggcgtacccg gactcgagcc gccgcgcggc cgtatcgaca gcctggagcc gcccgagcag
     1621 ttcgagcaag ggcggatcga agaactgcag gtgctttccg tctgctcggc catcg
//
LOCUS       DATIML010001094         3759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4559892, whole genome shotgun sequence.
ACCESSION   DATIML010001094 DATIML010000000
VERSION     DATIML010001094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3759
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4559892"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..725)
                     /locus_tag="VLJ38_18795"
     CDS             complement(<1..725)
                     /locus_tag="VLJ38_18795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41637.1"
                     /translation="MDGGEIGDETWTAAGSPYLVSGDVIVPEGKTLTLEAGTQVIVGA
                     SDLTAAGSDPELVEFNIHGEFYANGNVSSPVRLWNEKAESQSSWYGVILEPEATRARF
                     SYTEIANGASCIEMRHGAANVEIVATTLSTCDTGAYLLGDVSRFDRVLVQDSRYGVWI
                     QDAVGTTFSNFVARTNDKGIFVVDSQVSVQAATFVDNTIGFMAAGAIDEPTRITLSNS
                     IVADNSQQLKVGGSMSMAVNYSD"
     gene            1864..3228
                     /locus_tag="VLJ38_18800"
     CDS             1864..3228
                     /locus_tag="VLJ38_18800"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41638.1"
                     /translation="MPCGVGAQCDGQGSCEATGLGSVAAGGHHTCAVFADANVHCWGR
                     NVEGQLGAAFNVARVGDDEKPVSLELRLDFERDVAALTAGFAHTCALFVDGTVRCWGV
                     GDQDGYPQSVASLLGVSEASVHLDALGFVDPLVAADVELPGRAVQISAGPSGAHTCAL
                     LISGDVACWGFNADGQCGVGDKDEHVLAPGESVAPLDLGGARAVEVRAADAHTCVLLE
                     NGDVVCFGAGKRGRLGYGSPDSRLAPDHVVPVGEPALHIMTLAGSTCALLAGGRVRCW
                     GYDNDGQLGYGHGQNIGETETPKEAAALPGPAGRTLLGGDVAVGGGSTAIQLVPASDS
                     RAVCALFEGGSVRCWGENDRGQLGYGHTQDEGTTYTPDELATRAYDGRWLGGDVDFGG
                     TVRALAEGGRCALMAGPTSATGAPPLHCWGHDDDGELGLPAHFPAGSASLTPRELGPL
                     DLEP"
     gene            complement(3217..>3759)
                     /locus_tag="VLJ38_18805"
     CDS             complement(3217..>3759)
                     /locus_tag="VLJ38_18805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41639.1"
                     /translation="VDQTEGFLPVDFSGVDAAPAREAELPGAVRSDYALVLGGGVSTG
                     VASAVTFTHGFNAGLRSVGGPGAALSLAWLGDEEGPLHEWRLHLNAGFTWSLGQGKVR
                     GQLGALAGGGLLNQAVSGAPALRAGFVELTPLVGVTAELGARFGLWSELELTAALYRR
                     DARSTFSFLPAAWLGGSLRL"
BASE COUNT          605 a         1270 c         1300 g          584 t
ORIGIN      
        1 atgtccgagt aattgacggc catgctcatg ctgccgccga ccttgagctg ctgggaattg
       61 tcggcgacga tcgagttcga cagcgtgata cgagtaggct cgtcgatcgc gcccgcagcc
      121 atgaatccaa tcgtgttgtc cacgaacgtg gcggcctgca ccgacacctg tgaatccacg
      181 acgaagatgc ctttgtcgtt cgtgcgggcg acgaagttcg aaaacgtcgt accgacggcg
      241 tcctggatcc aaaccccgta acgggagtct tgcacgagca cgcggtcgaa ccggctcacg
      301 tctccgagca aatacgcacc cgtgtcgcac gtgctcagtg tcgtggccac gatttccacg
      361 ttcgccgccc cgtggcgcat ttcgatgcac gacgcgccgt tggcgatctc ggtataagag
      421 aagcgcgcgc gagtcgcctc gggctcgagg atcacgccgt accagctgct ctgtgactcc
      481 gccttctcgt tccacaggcg caccggcgag ctcacgttgc cgttcgcgta gaactcgccg
      541 tgaatattga attcgacgag ctccggatcg gagccggcgg ccgtgagatc gctcgcgccc
      601 acgatcacct gggtgcccgc ttcgagggtc agcgtctttc cctcggggac gatcacgtcc
      661 ccgctgacca ggtaggggct gccggcagcc gtccacgtct cgtcgccgat ctcgccgccg
      721 tccaccagcg tgatggctcg cgcctcccga ctccacaacg tcagaacggt taacccgaga
      781 ccgacgccaa ttcggctgac ccggtccgcc cgctgcttgc tgcccctacg catgcgaaca
      841 gacatagatc gaatttgtgc aggctgtcgt gccgaagcgg cacgactctc gtgctcgagc
      901 cgcaagggga agaccgtcga caggagacgg cagctcgagt aagctctgct cgtgcacggg
      961 tccacccgag tcgcggtggc gtccatcggc tgtgcgctca catgcctcgc ggcgtgtggc
     1021 ccgggcgtga gccgtgatcc gcttcacgga agagacggcg gcgccacggc gggaaacgcc
     1081 tcttttgcgc ccggcggcgg cggcatggcc acgggcggga ccgggctcgc gggcactcgc
     1141 gccgagccag ccacctcggg gcagagcggc gctgggaccg gctttgcgcc gaacgggctc
     1201 gccgtcggcg cagcgggctg cgagctcggc gccgactgtg cttccaaggt gtgtctttcg
     1261 gacgtcgacg gcacagctcg ctgctgcgag agcgattgtc tcgccagcgg acgcgtgtgt
     1321 tcgaccagcg gcacgtgcgt ttgtgcggcg gggatggagg aagtcggggg cgcgtgcctg
     1381 ttgaagaatg gtgagcgctg tcgggcggcg gagcgctgcg cgagcgacca ttgcatcgac
     1441 ggtctttgct gcgatgcgag ctgcgaccgc gcttgcgagc gctgtgacga gtccgggcac
     1501 tgtgtcttag acccgttcga tcaagcctgt gtcacggacc accccggctt cgagtgtacg
     1561 gcgcgcgggc gctgccgact tccgaacgcg gctgtctgcg gcgtgacggc cgactgcgac
     1621 tccgaacatt gcgagccagg gccgaaggga cagtcgatct gctgcgccac gagttgtcac
     1681 ggtctgtgcg agctttgcgg cgctagcggc gcctgcgacg ccttcccagc cagcgacgac
     1741 gcatgcacgc ccttgaaatg tccggccgac acgatctgcc ggagctattc caccccaccc
     1801 gcaggagcct gcggggccaa cggagcatgc gcgaactgcg agcccacgga cgcgccagct
     1861 ggggtgccgt gcggagtcgg cgcgcaatgc gacgggcaag gcagctgtga agcgacgggg
     1921 ctcggaagcg tcgccgccgg cgggcaccac acgtgcgccg tgttcgcgga cgcgaacgtt
     1981 cattgctggg gtaggaacgt cgaagggcag ctcggcgccg cgttcaacgt cgcgcgcgtg
     2041 ggcgacgacg aaaagccggt gtccctcgag ctaaggctcg atttcgagcg cgacgtggcg
     2101 gcgctcacgg ctggctttgc ccacacctgc gcgctcttcg tcgacggtac cgtgcgctgc
     2161 tggggcgtgg gcgaccagga cgggtacccg cagagcgtcg catcgctact cggcgtgagc
     2221 gaagcatccg ttcacctcga cgcgctcggg ttcgtcgatc cactggtcgc ggcggacgtg
     2281 gagctgccgg gtcgggccgt gcaaatcagc gcggggccga gcggcgccca cacttgcgcg
     2341 ctgctcattt ccggcgacgt tgcgtgttgg ggcttcaacg ccgacggcca atgcggcgtc
     2401 ggtgacaagg acgagcacgt gctcgcaccc ggtgaaagcg tcgcgcccct cgacctcggc
     2461 ggggcgcgag ccgtcgaggt ccgagcagcc gacgcacaca cctgcgtgct actcgagaac
     2521 ggcgacgtag tctgtttcgg tgcgggcaaa cgcggtcggc tcggctacgg ttcgccggac
     2581 tcgcgcctgg caccggatca cgtcgtgccg gtgggcgagc ccgcgctcca catcatgacc
     2641 ctcgcgggct cgacgtgtgc cctcttggcg ggcggtcggg tgcgctgctg gggctacgat
     2701 aacgacgggc agctcggcta cggtcacggg cagaacatcg gggagaccga gacgcccaag
     2761 gaagcggcag cgctacccgg tccggcgggg cgcacgttgc tcggcgggga cgttgcggtc
     2821 ggcggaggct cgacggccat tcaactagtc ccggcgagcg acagccgcgc agtctgcgcc
     2881 ctgttcgagg gaggctcggt gcgctgctgg ggagaaaacg accgaggcca gctcggctac
     2941 ggccacacgc aagacgaggg cacgacgtac acccccgacg agctcgcgac gagagcgtac
     3001 gacggtcgct ggctcggcgg cgacgtcgac ttcggcggta ccgtgcgcgc tctcgccgag
     3061 ggcggacgct gcgcgctcat ggccggtccg accagcgcga cgggcgcacc gccgctccat
     3121 tgctggggtc atgacgacga cggcgagctc ggtttgcctg ctcattttcc ggccggcagc
     3181 gcgagcttga cgccaaggga gctcggaccg ctcgatctag agccgtagcg agccgccgag
     3241 ccacgctgca ggcaaaaacg agaacgtcga gcgcgcgtca cgccgataga gagcagcggt
     3301 cagctccagt tccgaccaga ggccgaagcg tgcgccgagc tcggcggtga cacccacgag
     3361 cggcgtgagc tcgacgaagc cggcgcgcag tgccggtgct ccactgacgg cctgattcaa
     3421 gaggccgccg cccgcgagcg ccccgagctg accccgtacc tttccctgcc ctaacgacca
     3481 ggtaaagccc gcgttcaagt gcaagcgcca ctcgtgcagc gggccttctt cgtcccccaa
     3541 ccacgcgagc gagagcgctg cgccgggacc tccgacgctt cgcagtcccg cgttgaatcc
     3601 gtgcgtgaag gtcacggccg aggccacgcc ggtcgaaacg ccacccccga gcacgagcgc
     3661 gtagtccgac cgcaccgcac ccggaagctc cgcctcgcgc gccggtgcgg catcgacccc
     3721 cgagaaatcg accggcaaga acccctcggt ctggtcgac
//
LOCUS       DATIML010001095         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1096896, whole genome shotgun sequence.
ACCESSION   DATIML010001095 DATIML010000000
VERSION     DATIML010001095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096896"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VLJ38_18810"
     CDS             <1..203
                     /locus_tag="VLJ38_18810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41640.1"
                     /translation="DEREDTNKREATSAKGGNEFNPTNTNANGRAAAKFREPTWEELR
                     GLTADERRAILEYFKRINAGNP"
     gene            262..>1725
                     /locus_tag="VLJ38_18815"
     CDS             262..>1725
                     /locus_tag="VLJ38_18815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41641.1"
                     /translation="MIAALSIGPTQMVLRAQAPADTMAFYKALDLEAAGKYRDAVPLF
                     RSALRTSAGVNALLGLERVYAELGWSDSLVVPLDTLIAANPQEETYRTVQLRTLQSVG
                     RDADLRKAFDKWVHDAPSSAAPYREYARLLLQKNRSAAADSVLARAKQTLGTMKDLQF
                     ELAQSRAAQGQWVESAQAWRLALSTADYLEQAAAYALAPTPSSTRNQIREIFLALPIE
                     VPARRALADLEMSWGSPIDGWSALKGLPPDSAAADAWSEFAKRAEAEERWGLARDALE
                     SSLRWRRTPEIAVRAATAAINAGDAAAALRLAPLSDARGDSALAARSYLPLAVRALAA
                     LGRPAEAERLVASYDRFLPPGSRNNLTRTIAWGWVRTGDMARARAALNSTGAEGDSSD
                     AAGWLALYEGNLKSARNLLRGGTESSPELALALGLAARLKTDTAVAVGKAFLTLARND
                     SAAAAAEFERAAAVTPTVRSLLLFTAARIYAARGIDSS"
BASE COUNT          282 a          560 c          604 g          279 t
ORIGIN      
        1 aggacgagcg cgaagacacg aacaagcgcg aggcgacgtc cgcgaaaggc ggcaacgagt
       61 tcaatccgac gaatacgaac gccaacggtc gcgccgcggc gaaattccgc gagccgacat
      121 gggaagagct tcgtggtctg accgccgacg agcgtcgcgc gattctggag tatttcaagc
      181 gcatcaatgc tgggaatccg taggaaactg aagcacgcgg cacgagacgc gagacactgg
      241 agctctcgtc tcgttctgct ggtgatcgcc gcgctgtcga tcgggccgac gcagatggtg
      301 cttcgtgccc aagcgcctgc cgacacgatg gcgttttaca aagcgctcga tctcgaggcg
      361 gcggggaagt atcgcgatgc ggtgcctctc ttccgctccg cgcttcgaac gtcggcgggg
      421 gtcaacgcgc ttcttggcct cgagcgcgtg tacgcggagc tcggctggtc cgactcgctc
      481 gtcgttccgc tcgatacgct gatcgccgcg aacccgcagg aagagacgta ccgcaccgtc
      541 cagttgcgga cgctccaatc cgtcggtcgg gacgccgatc tccgaaaggc tttcgacaag
      601 tgggtccatg acgcgccgag cagcgcggcg ccctatcggg agtacgcgcg ccttctcctg
      661 cagaagaatc gctcggccgc ggctgacagt gtcttggccc gcgccaagca gacgctcggc
      721 acgatgaaag accttcagtt cgaactggcg cagtctcgcg ccgcgcaagg gcagtgggtc
      781 gaatcggcgc aagcgtggcg actcgcgctc tcgacggctg actatctcga gcaggccgct
      841 gcgtacgcgt tggctccgac gccgtcgtcg acgcgcaatc agatccgcga gatctttctc
      901 gcgctgccga tcgaagtacc ggcgcgccgc gcgctcgccg atctcgagat gagctggggc
      961 tcgccgatcg acggatggag cgcgctcaaa ggcctgccgc cggacagcgc ggcggccgac
     1021 gcctggagcg agtttgccaa gcgtgccgag gcggaggagc gctggggatt ggcgcgcgac
     1081 gcactcgagt cgtcactgcg gtggcgtcgg acgccggaga tcgctgtgcg tgccgcgacg
     1141 gccgcgatca acgccggtga tgccgccgcg gcacttcgcc tcgcgccatt gagcgacgcg
     1201 cgcggcgact cggcactggc ggcgcgaagc tatttgccgc tcgccgttcg cgcactcgcg
     1261 gcgctggggc gtccggctga agccgagcgc ctcgtagcct cgtacgatcg ttttcttccg
     1321 cccggctcgc gcaacaacct gacgcgcacg attgcctggg ggtgggtgcg aacgggcgac
     1381 atggcccgag cgcgcgccgc gctcaactcc accggcgccg agggcgattc gagcgacgcc
     1441 gctggttggc tcgcgctgta tgagggaaat ctcaagtcgg cgcggaatct gttgcgtgga
     1501 ggaacggagt cttcgccgga gctggcgctt gccctgggcc tcgcggcacg gcttaagacc
     1561 gacacggcgg tcgctgtggg aaaggcgttc ctgacgttgg cgcggaatga cagcgccgca
     1621 gcggccgccg aattcgagcg agcagccgcg gtgacgccga cggtccgctc actgctgctc
     1681 tttacggcgg cgcggatcta cgcggcgcgt ggcatcgatt cgtcg
//
LOCUS       DATIML010001096         1952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_227903, whole genome shotgun sequence.
ACCESSION   DATIML010001096 DATIML010000000
VERSION     DATIML010001096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227903"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1345)
                     /locus_tag="VLJ38_18820"
     CDS             complement(<1..1345)
                     /locus_tag="VLJ38_18820"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HSU41642.1"
                     /translation="MSENFDPVALELAGSVLVEASAGTGKTHAITLLVLRLILERELA
                     PAEILVMTFTEAATAELRVRIRRRLHQALEVLSGNPASAAAADPDLLRICERHRDSAS
                     LERLKRAVAELDEAPITTIHGFCHRVLHDHALRAGAPYGAELAKDLEELDEDVIYDFW
                     HRYVAELPELFDLIPDPPLPRLRALLREVRRHPRARLVPDPMDALMELDRDFVQYARA
                     ELDARKERQKVFGFDDLLGRVAEALAGQGGADVATSLRSRFKAALVDEFQDTDPVQYE
                     IVERVFASGGLPLFLIGDPKQAIYGFRGADVFTYLAAAGRARRATMHVNWRSDPGLVT
                     AVNTLFCPEHSFVFPEIRHPRIEPRPSVTDAFFAPTASGGASLEILQLEREKPEVALP
                     RANAEHQAPRVVAVEIARLLAGGATIEGRPVRASDIAVLTRNNKQCFDVQDALRDL"
     gene            complement(1342..>1952)
                     /locus_tag="VLJ38_18825"
     CDS             complement(1342..>1952)
                     /locus_tag="VLJ38_18825"
                     /inference="COORDINATES: protein motif:HMM:NF037683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41643.1"
                     /translation="RNGVELEPLEFAITLEGLPRVVGTLDCMFPGGRVEHTFSKPSAR
                     RLLALWIRHLALAASGRVARSTLIAREDDKPSVQVLGTLAPETARRHLSELVALFVEG
                     QSRPLPFLATVSHCYLLGIRRGSKTKGPKSPAEALNSAVYEYDGKESERDPHAPLAFD
                     RLLPPFDAEYDAERRPLEATPFHTLAARVYDPLLAALVEGNP"
BASE COUNT          307 a          632 c          704 g          309 t
ORIGIN      
        1 cgaggtcgcg cagagcgtcc tgcacgtcga agcattgctt gttgttgcgc gtgagcaccg
       61 cgatgtccga ggcgcgcacg ggacgccctt cgatcgtcgc gccgcccgcg agcaggcgcg
      121 caatctcgac cgccacgacg cgcggcgctt ggtgctctgc gttcgcgcgc ggcagcgcga
      181 cctcgggctt ttcgcgctcg agctgcagaa tctcgagtga cgcaccgccc gacgccgtgg
      241 gcgcgaagaa cgcgtccgtg acgctcgggc gcggctcgat acgcgggtgc cggatctcgg
      301 gaaaaacgaa gctgtgctcg gggcaaaaga gcgtgttgac cgccgtgacg aggccgggat
      361 ccgagcgcca gttcacgtgc atcgtcgcac gccgcgcgcg ccccgctgcc gcgaggtacg
      421 tgaacacgtc ggcgccgcga aagccgtaga tggcttgctt cggatcccca atcaaaaaga
      481 gcggcaagcc gccgctcgcg aacacgcgct cgacgatttc atactgcacg ggatcggtat
      541 cctgaaattc gtcgacgagc gctgctttga agcgcgacct gaggcttgtc gccacgtccg
      601 cgcccccctg ccccgcgagc gcctcggcga cgcgcccgag caagtcgtcg aagccgaaga
      661 ccttctgccg ttctttgcgg gcgtcgagct ccgcgcgcgc gtactgcacg aagtcgcgat
      721 cgagctccat cagggcgtcc atgggatccg gcacgagccg cgcgcgggga tggcgccgca
      781 cttcgcgcaa gagggcgcgc agccgtggca acggcgggtc ggggatgagg tcgaagagct
      841 cgggcagctc cgctacgtag cggtgccaga agtcgtaaat cacgtcttcg tcgagttctt
      901 cgagatcctt cgcgagctcg gcgccgtacg gagcgcccgc gcgcaacgcg tgatcgtgga
      961 gcacgcggtg acagaagccg tggatcgtcg tgatgggcgc ttcgtcgagc tcggccacgg
     1021 cgcgtttcaa gcgctcgagg ctggccgaat cgcggtgccg ctcgcagatg cgcagcaaat
     1081 cgggatccgc cgccgccgcg gacgccgggt tgccggaaag cacctcgagc gcttggtgca
     1141 agcggcgccg gatacgcacg cggagctctg ccgtggcggc ctccgtgaag gtcatcacga
     1201 ggatctcggc cggtgcgagc tcgcgctcga ggatgaggcg caagacgagc agcgtgatcg
     1261 cgtgggtctt gccggtaccg gcgctcgctt ccacgagcac gctgccggcg agctcgagcg
     1321 cgacgggatc gaaattttcg ctcatgggtt cccctccacg agcgcggcga gtagcgggtc
     1381 gtagacgcgc gcggcgagcg tgtgaaatgg ggtcgcctcg agcgggcgcc gctcggcatc
     1441 gtattcggcg tcgaacggcg gcaagagccg atcgaaggcg agcggcgcgt gcggatcgcg
     1501 ttcgctctct ttgccgtcgt actcgtagac ggcggagttt agcgcttcgg ccgggctctt
     1561 cgggcctttg gttttggagc cgcggcgaat gccgagcaag tagcagtgac tgacggtcgc
     1621 gagaaacggc agcggccgtg attgtccttc gacgaagagc gcgacgagct cgctcaagtg
     1681 acgccgtgcg gtttcgggtg cgagcgtccc gagcacttgc acgctcggct tgtcgtcttc
     1741 gcgcgcgatg agcgtgctcc gcgcgacgcg tccgctcgcc gcgagcgcga ggtgacggat
     1801 ccagagcgcg agcaagcgcc gcgccgacgg cttggagaac gtgtgctcga cgcgcccgcc
     1861 ggggaacatg cagtcgagcg tcccgacgac gcgggggagc ccctcgagcg tgatcgcgaa
     1921 ttcgagcggc tcgagctcga cgccgtttcg gc
//
LOCUS       DATIML010001097         3283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4560344, whole genome shotgun sequence.
ACCESSION   DATIML010001097 DATIML010000000
VERSION     DATIML010001097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3283
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4560344"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..924)
                     /locus_tag="VLJ38_18830"
     CDS             complement(<1..924)
                     /locus_tag="VLJ38_18830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41644.1"
                     /translation="MRQRAGLYLGVGTWLLLSLTGCVATVGADTETVGDVSEALTTYE
                     VGPGKAYASLQAVASLLKAGDTVKVYGGATYAGGIRFTKSGTATSKITVLGMRVNGVR
                     PVLSGGTTTVEFAGNHYVFQGFDVTAGSSRCVFHHADDITIRDSVIHDCPTHGLLGAD
                     ADSGSLTLEYSEVHHCGSGDTHHQIYMATDETAHPGSVFRMQYCYVHDGLGGNNVKSR
                     AERNEIYYNWVEGAYYYELELIGPDGQDESLAREDSDVVGNVLYQGYTTRSHYAVRIG
                     GDGTGETWGRYRFLNNTVVMGNASTSAVFRPF"
     gene            complement(1208..2083)
                     /locus_tag="VLJ38_18835"
     CDS             complement(1208..2083)
                     /locus_tag="VLJ38_18835"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSU41645.1"
                     /translation="MLETTATTSLTTRPDLLAAGEQRLGFMERHIIAFVRRTFEPGRA
                     DRAIRFLQHWIGSTWIHHFTKNLRYVFGLERLPRLDRRQSYLLVSNHRSFFDLYVVIG
                     HLVRLRMRHRILFPVRADFFYTGPLGLFVNGVMSFFAMYPPIFRERKKLALNVVSLDE
                     LAWLLRQGGYFCGIHPEGTRKKDDDPYTFLPAQRGVGRVIHEARVPVIPVFINGLLPN
                     DLARQVTSNFDGTGRKIVVVFGAPIDFSDLLAEPGTPKVHQAIADRTLDVIGRLGAEE
                     RLHRAELERRSPPAA"
     gene            complement(2076..2846)
                     /locus_tag="VLJ38_18840"
     CDS             complement(2076..2846)
                     /locus_tag="VLJ38_18840"
                     /inference="COORDINATES: protein motif:HMM:NF018837.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SseB family protein"
                     /protein_id="HSU41646.1"
                     /translation="MALTEPSSHLTELVTQARRGLRRDVASLEAALDDAELYVALQSP
                     IAGAPEGEAVALDRELEIVPHLLRDEEGQGYAALFTRPELVEAVASELGWQTDGGELS
                     VCSLPARIACELALGVIDEESVFGLVLDPGQASELLLRRSELASIVAGRAVPLVGYLA
                     DLPPLEDEQVLLAEPSDPPPPAFMSALERCVAETPEITTHSVARTFNPERDLEPHLTL
                     RLGAADGADRRALAARVIGAVGELVPPPGYIDIVFDDA"
     gene            2950..>3283
                     /locus_tag="VLJ38_18845"
     CDS             2950..>3283
                     /locus_tag="VLJ38_18845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSU41647.1"
                     /translation="MNDARRGFYQEVQPYRTGFLDVGGEHSLYYEESGNPAGKPALFL
                     HGGPGGGTSPRQRRFFDPTRYRIVLFDQRGCGKSRPHASLVDNTTPHLVADIETLRKH
                     LGIERWLVF"
BASE COUNT          545 a         1009 c         1169 g          560 t
ORIGIN      
        1 gaagggccta aaaacagccg acgtggaggc gttgcccatg acgaccgtgt tgttcaaaaa
       61 tcggtaacgt ccccaggttt cgcccgtgcc gtcgccgccg atgcgcacgg catagtgcga
      121 gcgcgtggtg tagccttggt aaagcacgtt gccgacgacg tccgagtctt cgcgcgcgag
      181 actttcgtct tggccgtcgg ggccaatgag ctcgagctcg tagtagtacg cgccctcgac
      241 ccagttgtaa tagatctcgt tgcgctcggc gcggctcttc acgttgttgc cgccgagccc
      301 gtcgtgcacg tagcagtact gcatgcgaaa gacggagccg ggatgcgccg tctcgtcggt
      361 cgccatgtag atttgatggt gcgtgtcgcc ggagccacaa tggtggacct cgctgtattc
      421 gagcgtgagg gagcccgagt ccgcgtcggc accgagcagg ccgtgcgtcg ggcagtcgtg
      481 aatgacgctg tcgcggatcg tgatgtcgtc ggcatggtga aagacgcagc gcgaggagcc
      541 cgccgtcacg tcgaagcctt ggaacacgta gtgattaccg gcaaattcga cggtcgtcgt
      601 gccgcccgag agcacggggc gcacgccgtt gacgcgcatg ccgaggaccg tgattttgct
      661 cgtggcggtg cctgatttgg tgaagcggat gccgcccgcg tacgtcgcgc cgccgtagac
      721 cttgacggtg tcgcctgcct tgagcagcga cgccacggct tgcagcgacg cgtacgcctt
      781 gcccggtccg acctcgtacg tcgtgagggc ttccgagacg tcgccgaccg tctccgtgtc
      841 cgctcctacg gtcgcaacac aaccggtcag tgaaagaagc agccacgttc cgactccaag
      901 gtacagacct gctcgttgtc tcatcgattg cattcccttt ccgctcgctg cctacggcga
      961 ggtttcgctc gagttgaggg gtcgggcgag cgcgtctgac cgaggcacgt gagggttctt
     1021 gggacgaggc gtgcgctttt tcgctcagct cggcgacggc ccgacctgtc ccaaaatgcc
     1081 cgcgagattt acgccatgcg gcgggctgcg acgacgagtg gaacgacgcg tgagcgcgac
     1141 gttcacgtcg ctgaacgtcg gtcgccccta aagcaaatgt gaggcgacga ccgccacgtc
     1201 agcgaggcta cgctgccggc ggcgaacggc gctcgagctc ggcgcgatgc aggcgctctt
     1261 cggcgccgag gcggccgatc acgtcgagcg tgcgatccgc gatggcttgg tgcaccttgg
     1321 gcgtgcccgg ctccgcgagc agatccgaaa aatcgatggg agcgccgaag acgacgacga
     1381 tcttgcggcc ggtgccgtcg aagttgctcg tgacctggcg cgcgagatcg ttcggcaaga
     1441 ggccgttgat gaagacgggg atgaccggga cgcgcgcctc atggatgacg cgaccgacgc
     1501 cgcgctgggc cggcaagaac gtgtacgggt cgtcgtcctt tttgcgcgtg ccttcggggt
     1561 ggatgccgca aaagtagccc ccttgtctga gcagccaagc gagctcgtcg agactcacga
     1621 cgttcagcgc gagcttcttc ctttcgcgga aaatcggtgg gtacatggcg aagaagctca
     1681 tgacgccgtt gacgaagagg ccgagcgggc ccgtgtagaa gaagtcggcg cgcacgggaa
     1741 agaggatgcg gtgccgcatg cgcaggcgca cgaggtggcc gatcacgacg tagaggtcga
     1801 agaagctgcg gtgattggag acgagcaggt agctctggcg ccggtcgagg cgcgggagcc
     1861 gctcgaggcc gaagacgtag cggaggtttt tggtgaagtg gtggatccag gtcgagccga
     1921 tccaatgctg gagaaagcga atggcgcgat cggcgcggcc gggctcgaag gtgcggcgca
     1981 cgaaggcgat gatgtgccgc tccatgaagc cgaggcgctg ctcgcccgcg gcgagcaagt
     2041 cggggcgcgt ggtgaggctc gtggttgcgg tagtctcaag catcgtcgaa gacgatgtcg
     2101 atgtagcccg gcggcgggac gagctcgccg acggcgccga tcacgcgcgc agcgagcgcg
     2161 cgacgatcgg ctccgtccgc ggcgccgagg cggagcgtga ggtggggctc gaggtcgcgt
     2221 tccggattga acgtgcgcgc gacgctgtgc gtcgtaatct ctggcgtttc tgccacgcag
     2281 cgctcgagcg cgctcatgaa cgccggcggc ggcggatcgc tcggttcggc gagcagcacc
     2341 tgttcgtcct cgagcggcgg cagatcggcg aggtagccga cgagcggcac ggcgcgaccc
     2401 gcgacgatac tggcgagctc ggagcggcgg agcagcagct cgctcgcctg gccggggtcg
     2461 agcacgaggc cgaacacgct ttcttcgtcg atcacgccga gtgcgagctc gcaggcgatg
     2521 cgcgcgggca gcgagcagac gctgagctcg cccccgtccg tttgccagcc gagctcgctc
     2581 gcgacggctt cgacgagctc cgggcgcgtg aagagcgcgg cgtacccttg gccctcttcg
     2641 tcgcgcaaca ggtgcggcac gatttcgagc tcgcggtcga gcgcgacggc ttcgccttcg
     2701 ggcgcgcctg cgatggggct ttggagcgcg acgtagagct cggcgtcgtc gagcgcggct
     2761 tcgagtgaag ctacgtcgcg ccggaggcct cggcgtgcct gcgtcacgag ttcggtgagg
     2821 tgagacgaag gctcggtgag ggccatgcag acgggcgaaa cgggcgctcg tggccgtttc
     2881 ggatgctcgg agctaacacg atgccgccct cgacgcacgg ccgttgctct ggcacgctcc
     2941 gctgccccca tgaacgacgc ccgccgcggt ttctaccaag aagtgcagcc gtatcgcact
     3001 gggttcttgg acgtgggcgg cgaacattcg ctctactacg aagagtcggg caatcccgcg
     3061 gggaaacctg cgctgttttt acacggcgga cccggcggcg ggacgagccc gcgacaacga
     3121 cgcttcttcg acccgacgcg ctatcgcatc gtgctcttcg atcagcgcgg ctgcggcaag
     3181 agtcgcccgc acgcttcgct cgtcgacaac acgacgccgc acctcgtcgc cgatatcgag
     3241 acgctgcgca aacacctcgg catcgagcgc tggctcgtgt tcg
//
LOCUS       DATIML010001098         2802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1676645, whole genome shotgun sequence.
ACCESSION   DATIML010001098 DATIML010000000
VERSION     DATIML010001098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1676645"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /locus_tag="VLJ38_18850"
     CDS             <1..535
                     /locus_tag="VLJ38_18850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41648.1"
                     /translation="RGVAVALTWNAVVLALLGGRGSDRTGLTVTVGTRDQSLYRALEA
                     LPPNVVIAGWPDEVMDCLPYLARRSVLLSRETQQPWNTKYVEMLRERMFALVRAYFAT
                     TNAPLLELRDRYHVTHLLLNRDYFAKPPDYFKPFDEFIHATFEQARGVRFAALDAVPR
                     AQVLAAGPYVLLDLSKL"
     gene            complement(557..>2802)
                     /locus_tag="VLJ38_18855"
     CDS             complement(557..>2802)
                     /locus_tag="VLJ38_18855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41649.1"
                     /translation="VHAFTLGRCAALSGAAVLLTITLTWTLRRRTGAVAASSRPNAAL
                     TRDGWNVTIAAALLCTGFGVLYAAYPTYFLLGGQDPGPYLAFAARIARTGGLNLAAPA
                     IEAWSHAHPGLMRGLPAVYGNLTDQHGGQALEAQFLHLFTAFDATFFALDAIEGAVRA
                     NAWLAVLCLATGFSLLRRIGTTPMAFAYVLALGVNPAFIWASRITLSEMLALWLNLSS
                     LLLLALAWDRRAVGLGMLAGVVSALGLLNRLDGGIGVFALIGFSLAALVGTREHRRVA
                     ACAAVAHFVFSLIGYEQAYALSPIYCRSITRGSHTAAIPFVTLSLDVLAFGLALAPKR
                     LQNKLRLNERSLRLGGYAGVVLAFLWLGFGLWLRPHVDQSDDAPAMRELGWYVGAATW
                     PFVIGGLSLALSAARLRRWLPLWAFSLATFLLYTARTDVAPVHIWASRRWVEHVIPLT
                     LACAVLGVTWVVERMRGRWSTVATAAALAVTCLGPPLAFDRPFLFHSMLKGLPKAYSR
                     VAAYARAHPEQWPLVTHHVHFGSILTYIYEIPTVVLDSETGIPAFERGELTGELAVGF
                     TAFERRQSAPDPSGYVGVYLEPSKDHRPSELIEQRFPLEIGEIGGRTFDAEMPAWHPA
                     FRRQVSFTAPNGSVVSNGQRGQLLYGPWITLTPGRYRVEWYGRLDAAPKNKPQGALDV
                     IYDEGRHTVAAMPLALPSPTRGNDVLGELEFTLNTRLEGIEFRVRVEPRVRLILTKVR
                     LQCFGTP"
BASE COUNT          495 a          920 c          993 g          394 t
ORIGIN      
        1 gcgcggcgtc gcggtcgcgc tcacgtggaa cgccgtcgtc ctcgccctac tgggcggccg
       61 cggctccgat cggacggggc tcaccgtcac ggtcggcacg cgcgaccagt cgctctaccg
      121 cgcactcgag gcgctgcctc cgaacgtcgt gattgcgggc tggcccgacg aagtcatgga
      181 ttgcctgccg tacctcgcgc ggcgctcggt gctgctctcg cgcgagacgc agcagccgtg
      241 gaacaccaaa tacgtggaga tgctgcgcga gcgcatgttc gcgctcgtgc gcgcctactt
      301 tgcgacgacg aacgctccgc tgctcgagct tcgcgatcgg tatcacgtga cgcacctgct
      361 gctgaatcgt gactacttcg ccaagccgcc cgactacttc aagccgttcg acgagttcat
      421 ccacgcgacg ttcgagcagg cccgaggcgt tcgtttcgcc gctctcgacg ccgtcccgcg
      481 tgcgcaggtg ctcgcggcgg ggccgtacgt gctcttggat ctctcgaaat tgtgagtcgg
      541 cgcgcacgcg gtcacgtcac ggcgtgccga aacactgcag ccggaccttc gtcagaatga
      601 ggcggacgcg aggttcgacc cggacgcgaa attctatgcc ttcgaggcgg gtgttcaagg
      661 tgaactcgag ctcgccgagg acgtcgttgc cgcgtgtggg gctcgggagg gcgagcggca
      721 ttgcggcgac ggtgtgccgg ccctcgtcgt aaatgacgtc gagcgcgccc tggggtttgt
      781 tcttcggcgc agcgtcgagc cggccgtacc attccacgcg atagcggccc ggcgtcagcg
      841 tgatccaagg gccgtaaagc agctgaccgc gctggccgtt cgagacgacg ctgccgttcg
      901 gggcggtaaa gctcacctgg cggcggaagg cggggtgcca ggccggcatc tctgcgtcga
      961 aggtcctgcc gccgatctca ccgatctcga gcgggaagcg ctgctcgatg agctcggaag
     1021 gccggtgatc tttgctcggc tctagataca cgccgacgta cccgctcgga tcgggcgcgc
     1081 tctgacgacg ttcgaaagcc gtgaagccga cggcaagctc ccccgtgagc tccccgcgct
     1141 cgaacgccgg aatgcccgtc tcggaatcca agacgacggt ggggatctcg tagatgtaag
     1201 tcaggatcga gccgaagtgc acgtggtgcg tgacgagcgg ccactgctcc ggatgcgctc
     1261 gtgcgtaggc ggccacgcgc gagtacgcct tgggcaggcc cttgagcatg ctgtggaaca
     1321 gaaaggggcg atcgaacgcc agcggcgggc cgagacaggt gacggccagc gctgcagccg
     1381 tcgcgacggt cgaccagcga ccgcgcatgc gctcgacgac ccacgtgacg ccgaggaccg
     1441 cgcacgccag tgtgagcggg atcacgtgct cgacccagcg ccgggaagcc cagatgtgca
     1501 cgggcgctac gtccgtgcgc gcggtgtaga gcaggaacgt cgcgagcgag aaggcccaga
     1561 gcgggagcca ccgtcgcaag cgcgcggccg agagcgcgag cgacaatccg ccgatcacga
     1621 acggccaagt cgccgcgccc acgtaccagc cgagctcccg catggccgga gcgtcgtccg
     1681 actgatcgac gtgcgggcgc agccacaggc cgaaccccag ccacaagaac gcgagcacca
     1741 cgccggcgta gccgccgagg cgaaggctcc tctcgttcag ccggagcttg ttttgcaagc
     1801 gtttcggcgc gagagcgagg ccgaacgcga gcacgtcgag cgacagcgtg acgaacggta
     1861 tggccgcggt gtgcgaccca cgcgtgatgg agcggcagta aatcggcgaa agcgcgtacg
     1921 cctgctcgta gccgatcagg ctgaagacga agtgcgcgac cgccgcgcag gccgcgacac
     1981 gccggtgctc gcgcgtgccg acgagcgcag ccagagaaaa gccgatcagc gcgaacacgc
     2041 cgatgccgcc gtcgagccgg ttcaagagtc cgagcgccga gaccacgccc gcgagcatgc
     2101 cgagaccgac cgcgcgccga tcccaagcga gtgcgaggag cagcaggctc gatagattga
     2161 gccacagcgc gagcatctcg ctcagcgtga tgcggctcgc ccagatgaac gccgggttga
     2221 cgccgagcgc caggacgtac gcgaacgcca tgggtgtcgt gccgatccgg cggagcagcg
     2281 agaaaccggt cgcgaggcac aagacggcga gccacgcgtt cgcgcgcacg gcgccttcga
     2341 tcgcgtcgag cgcgaagaac gtcgcgtcga aagccgtgaa gaggtggagg aattgagctt
     2401 cgagtgcctg gccgccgtgt tgatcggtga gattgccgta gaccgccggc aggcctcgca
     2461 tgaggcccgg gtgggcgtgc gaccaagctt caatcgcggg tgccgcgagg ttgaggccgc
     2521 ccgtgcgcgc gatgcgcgcg gcgaaagcga ggtagggacc cggatcttgc ccgccgagca
     2581 agaagtacgt cggatacgcg gcgtagagga caccgaagcc ggtgcagagc agcgctgccg
     2641 cgatggtcac gttccagccg tcccgcgtca acgcggcgtt cggccgagag cttgccgcga
     2701 cggcccctgt ccggcggcgt agcgtccaag tcaacgtgat ggtgaggagc accgcggcgc
     2761 cggacagcgc cgcgcagcgc ccgagcgtaa acgcatgcac gc
//
LOCUS       DATIML010001099         1764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_520070, whole genome shotgun sequence.
ACCESSION   DATIML010001099 DATIML010000000
VERSION     DATIML010001099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520070"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1663)
                     /locus_tag="VLJ38_18860"
     CDS             complement(<1..1663)
                     /locus_tag="VLJ38_18860"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HSU41650.1"
                     /translation="MLPIRGTVVFPGYPTTLAVGRPVSLKALEAASQGERRIFVVAER
                     EPAEEPSPDKLYTVGVLARLGPVQMGHGTLQVVLTGEQRAAAIDYLAGDFMRAVVVPL
                     QQLPPRAPDDPAFLALYREARERALELGRLRGVSDEILNRVLESVSDPGDFSDLVANF
                     LEIGVAEKQELLETPDTEDRLRRVLIQLQRALELSKAQQHIKDEVQKELGDRQREMYL
                     REQMKAIQRELGETGDNRDLEQLKQKLDKLELLPEARAEVDRELARLSRTGPESMEAQ
                     VIRTYLEWVAELPWSTRSQDDMDLKRAAEVLEQDHFGLRDVKDRVLEFLSVRLLNARH
                     ADEPSRALARGPILLFVGPPGVGKTSIAQSIAKALGRKYVRAALGGIRDEADIRGHRR
                     TYVGALPGRLIQGLRQAGTKNPVFLLDEVDKLGASYQGDPASALLEVLDPAQNDSFVD
                     HYLGVPFDLSEVLFIATGNFIHQIPPPLLDRMELVEFAGYTEREKVEIAKRYLVPRQL
                     EESGLVGRADGITFAEDAIMTIVSEYTHESGVRQLERQLGAVARKL"
BASE COUNT          284 a          584 c          596 g          300 t
ORIGIN      
        1 cgagtttacg cgcgacggct ccgagctggc gctcgagttg ccgaacgccg ctctcgtgcg
       61 tgtattcgga gacgatcgtc atgatcgcgt cctcggcgaa ggtgatgccg tcggctcggc
      121 cgaccagccc cgattcttcg agttggcgcg ggacgagata gcgcttggcg atctcgacct
      181 tctcgcgctc ggtgtagccg gcgaactcca cgagctccat gcgatcgagc aggggcggcg
      241 ggatctggtg gatgaagttg ccggtcgcga tgaacaggac ctcgctgaga tcgaacggca
      301 cgccgaggta gtgatcgacg aacgagtcgt tctgcgcggg atcgaggacc tcgagcagcg
      361 cgctcgccgg gtcgccctgg tacgacgcgc cgagcttgtc gacctcgtcg agcaggaata
      421 cggggttctt ggtgcccgct tggcgcaggc cctgaatcaa gcgaccaggc agcgctccga
      481 cgtaagtgcg gcggtgcccg cggatgtccg cctcgtcgcg gatgccgccg agcgcggcac
      541 gcacgtactt gcggccgagc gctttggcga tcgactgggc gatcgacgtc ttgccgacgc
      601 cgggcggacc gacgaagagc aggatcggtc cgcgcgcgag cgcccgcgac ggctcgtcgg
      661 cgtgccgcgc attcaagagc cgcaccgaca ggaactcgag cacgcgatct ttcacgtcgc
      721 gcaatccgaa atgatcttgt tccaagactt cggcggcgcg cttcagatcc atgtcgtctt
      781 gcgagcgcgt gctccacggt agctcggcga cccattcgag ataggtccgg atcacctgcg
      841 cttccatcga ctccgggccc gtacgcgaca ggcgagcgag ctcgcggtcc acctccgcac
      901 gcgcctccgg caagagctcg agcttgtcga gcttctgctt gagctgctcg aggtcgcggt
      961 tatcgcccgt ttcgccgagc tcgcgctgga tggccttcat ctgctcgcgc aggtacatct
     1021 cgcgctgccg gtcgccgagc tccttctgca cctcgtcctt gatgtgctgc tgagccttcg
     1081 agagctcgag cgcgcgctga agttgaatca ggacgcgccg gaggcgatct tccgtgtccg
     1141 gcgtttcgag cagctcctgc ttctccgcca cgccgatttc gagaaaattc gcgaccaaat
     1201 cgctgaagtc ccccggatcg gagacggact cgagcacgcg gttcaagatc tcgtcgctca
     1261 cgccgcgcag gcggccgagc tcgagcgcgc gctcgcgcgc ttcacggtac agcgccaaaa
     1321 acgcgggatc gtccggcgcg cgcggcggca gctgctgcag cggaacgacg acggcgcgca
     1381 tgaaatcgcc cgccaggtag tcaatcgccg ccgctcgctg ttcgcccgtg agcacgacct
     1441 gcagcgttcc gtgacccatc tgcaccggac cgaggcgggc caacacgccg accgtgtaga
     1501 gtttgtccgg cgacggctct tcggcaggct cgcgctcggc cacgacaaaa atgcgccgtt
     1561 cgccctgact cgcggcttcg agcgccttga gcgatacggg acgccccacg gcgagcgtgg
     1621 tcgggtaacc cgggaagacc acggtgcctc gaatcggaag caccggtacg gtttgtcgtt
     1681 cggccatgtg ccgggcgaag caagagcggt accagcgggc gggcagggac ggcccggcgc
     1741 ggtcttcagc aaggggtgag cgcg
//
LOCUS       DATIML010001100         8627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1389196, whole genome shotgun sequence.
ACCESSION   DATIML010001100 DATIML010000000
VERSION     DATIML010001100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8627
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1389196"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VLJ38_18865"
     CDS             <1..240
                     /locus_tag="VLJ38_18865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41651.1"
                     /translation="VFFVEPGVGYGEMYDNQGGGGPFTNSSLHRSEVRFDLRVGAEPW
                     HRLTPFVGGSLTRRIRGNGQEATYRGEFSAGLSFL"
     gene            442..1041
                     /locus_tag="VLJ38_18870"
     CDS             442..1041
                     /locus_tag="VLJ38_18870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU41652.1"
                     /translation="MALSELVTMADSAFVERERALQSDLVARLTLGDRSAVAEVYDAH
                     HAAVRAFAKRLVGEVAAAEDLVHQVFVALPQAVRGYRGDASLRTFLISVAVNHARHHV
                     RAAARRRYAMERYEREPSRASNDPEQLTGRRELALALERCLDALPLDQRVAFVLCEVE
                     ERSSSEVAQIVGAPEGTVRTRLFHAKKKLRALLEREGVR"
     gene            1038..1847
                     /locus_tag="VLJ38_18875"
     CDS             1038..1847
                     /locus_tag="VLJ38_18875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41653.1"
                     /translation="MTDDLLARAARALREETVGDDASARFTRSRIMASVHDERVKRRT
                     RWAFLAPIAATFIAASAYGAATGKTRAVVQSITHALGFHRDEPAPREPAQQPAARRRT
                     AEPHVASSPVPLPAPPAPSATAAVVESASPDPATSAVDSTSGSEPKPPRSRGVEGIAV
                     AAAPRSLPDAGAAAADPSFELYRVAHRAHFVERDYDRALGAWDAYLKASPNGALAPEA
                     RYNRALCLVRLHRSEEARVALKPFAEGRYGTYRREDAQKLLAALPAGPAGP"
     gene            1937..2647
                     /locus_tag="VLJ38_18880"
     CDS             1937..2647
                     /locus_tag="VLJ38_18880"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU41654.1"
                     /translation="MALLSGRRILITGVSRGIGFETARLFLEEGAELLGVARDAARLE
                     RARQALDPSGERLSVVAAELTGEDAPALLARAVEARWGALDVLFNNAAVQIDGAARGV
                     STVAEAVFQQSLTENLVAPYRVTRALLPLLRRGTEPRIVNVSSGAGNLESMQMVDIPS
                     YRLSKWALNGLTLLLAGELAGAVSVNAFDPGWVKTDLGGPNAPGKPEESARGALALVT
                     LPFETTGKFWKDGIQIPF"
     gene            2717..3187
                     /locus_tag="VLJ38_18885"
     CDS             2717..3187
                     /locus_tag="VLJ38_18885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41655.1"
                     /translation="MRAAGQAAPPGLVRMQDFLLIIHFLGLALGVGTSFATLRLGLAT
                     KDLPPAERAQFFKHAIALGKNGSLGLALLIASGLGMLFTRGVTTVFSSGGVAFHVKLT
                     LVLVLAGLLGFSQVLVKRVREKQDAQAMATLAKVGPVMLLTGLGIVVAAVLAFH"
     gene            3201..6113
                     /locus_tag="VLJ38_18890"
     CDS             3201..6113
                     /locus_tag="VLJ38_18890"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSU41656.1"
                     /translation="MARQRLLVIVDHFDHVSGGYEAQLRSAFEATCQKHDLDLLLLVG
                     GAFDDPNPVGAAHTRVYELLSENSADGAVLLSSGLTAYTGPERLAALRAALGPMAVAS
                     VGHVLPGVPSVVVDNRPGMAALVEHVITVHGRRRLAFIGGPPKNPDAEARLSVFREVL
                     ARHEIVFEPRLSATGYFTAPSGGKAALELLETGLPFDALIVANDAMALSAVEALRGRS
                     MRIPRDVVVTGFDDLVLSRLASPPLTTVRQPLERMGVAAVELVLEQLWGRPVPERIEL
                     PVEFVARASCGCDERSSERRRAASLPAAAEHTDGAPPLERLAQLTARQGDATPAPWEA
                     RLIEALEVELRGTPGEFLDALEDTLDQAVEGQDAYERLQRWVARLRRAGLGADLETTW
                     ERADRTIDSAMMRSQARLRLTADVFFQNLLRSGERLSTASLETNTLRRVLAEELAELR
                     IKNASVSLYVNADRRELLPFLWLDDGKARDVEPPGFPAAALLPPSEPERRRSYCVLPL
                     TYESEQLGVAAFELGSGFIVFPMLAGQLSAALKNVALHQEILRTTTLHERSVQERLAT
                     AERMASLSVLAGGVAHDLNNALGPLVTLPDVILSELDELKQGLLSDDSELRLDVMTIK
                     SSALRASQTIKDLMLLGRPGAMPKQTLDLNEIVSSATSPEALRFLAPRAQSVRVQLEL
                     SVGSLPVVASEPHIVRAVGNLVRNASEAIAGAGHIRVRTSAVALPVLFGAYELIPPGE
                     YVTVTVSDTGQGISPSDFTRIFEPFFSRKRLVDSSGSGLGLAIVHGVVKEHGGYVDVT
                     SKVGQGTSFTLYFPRASSAPISERAVSVAPGGSARILIVDDEPIQLQAARRVLRHLGY
                     QVETLQSGSEALARFQSEHRRLGGGGSIPPGAPPPFDLVILDYALNEEQNGLETLERM
                     RRLFPTQRGIMVSGHGRAEHEGSGSSVTWLPKPYSAEALARVVRRTLESDPPPSVA"
     gene            6372..8147
                     /locus_tag="VLJ38_18895"
     CDS             6372..8147
                     /locus_tag="VLJ38_18895"
                     /inference="COORDINATES: protein motif:HMM:NF013806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41657.1"
                     /translation="MQKHVFPLLVGSLTVIACSTANPPAGDDAVPITGGTTSMGSGGT
                     GTGGTGTGGTGSPTTGGTGNTSTGGTGVATGGTGVSTGGTGVATGGTGVGTGGTSMGG
                     MSQGATGGTSSMSGAGGGSAGGGMVTCSNTDKSILPIDSTGWVDKSCNACGIQGAFYW
                     YADANTTPSLMCNGAACVANAPPYQAGAPGPGMCISGKATGTAADWGAGIGLSLNDSG
                     GMTSVKGSFDATKAACGNITGFDITLTGNTGGMPVRIGFTTSGDGTTVAPFIPVGDPA
                     GMSLALSGSSQIVIKNAVIPADWMKTDPSPPDPAKIYDMQIQVAADQAKAGTPFSLCV
                     TSIKPVTDGSGGGGGGGNCKSSSVGTISSNTGVQALGSSGLGYQNNVNNLDSGSQSVT
                     GMYGTGCGALTVNTTGIKSKNDAPASYPSLVDGWHWGSWSGAYTQGSVKAISALSSVK
                     SSFAFTPPAGNKWDVSYDMWVAQSAGISAPDGNTLEVMVWLDYSNSVTTNPIGSKLTT
                     SFSAAGTTWEVWYGATGAWHTVSYRRSPGTAPVTDLDLLAFLKDAVTHGTGSTSWNLL
                     SVEAGFELFDATAGGSIDSYSCSIN"
     gene            complement(8259..>8627)
                     /gene="msrA"
                     /locus_tag="VLJ38_18900"
     CDS             complement(8259..>8627)
                     /gene="msrA"
                     /locus_tag="VLJ38_18900"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HSU41658.1"
                     /translation="VYEQVKTGRTGHAESIRVIFDPNKLSYADLLEHWFFRMHDPTTA
                     NRQGNDVGTQYRSAIFVSSLEQRQTAEEVKARVNASGKWKRPVVTEIVDAGEFTPAED
                     YHQDYLEKHHGGYTCHFLRD"
BASE COUNT         1348 a         2928 c         2917 g         1434 t
ORIGIN      
        1 gtcttcttcg tcgagccggg cgtcggctat ggcgagatgt acgacaacca gggtggaggc
       61 ggtccgttca cgaattcgtc cctgcaccga tccgaggttc gtttcgatct gcgagtcggc
      121 gccgagccgt ggcaccgcct cacgcccttc gtcggcggta gccttacccg gcgcatccgt
      181 ggcaacggtc aggaagcgac ctatcgcggg gaattcagtg ccgggctgtc gttcctgtaa
      241 aaggcaatca tttcctcagc ttggacgttg actcgccgcg gcgtgaataa aacgcatgcc
      301 cgttttgaac ggtggcatgg cgggcgggca ctacccctga agagccgaag ggtccgagtc
      361 gcggaacgca cggcccgaga aacatggttg ctggcgccga tcccgatctg gcctcccaaa
      421 accgcgcgag tcgagcctag catggcgctc tctgagctcg tgaccatggc ggactcggcg
      481 ttcgttgagc gcgaaagggc attgcagagc gatctcgtcg ctcggctcac gctcggcgat
      541 cgttcggcgg tcgcggaagt gtacgacgcg catcacgccg ccgtgcgcgc gttcgccaag
      601 cgtctcgtcg gtgaggtcgc ggccgccgag gatctggtgc accaagtgtt cgtcgcgcta
      661 cctcaggcgg tgcgcgggta tcgaggagac gcgtcgctcc ggacgttctt gatttcggtg
      721 gccgtcaacc acgcgcggca tcacgtacgc gccgcagcgc gtcgtcgtta cgccatggag
      781 cgttacgagc gcgaaccgtc gcgggcgtcg aatgaccccg agcagctcac gggacggcgt
      841 gagctcgcgc tcgcgctcga gcgttgcctc gacgcgctac cgctcgatca gcgggtggcg
      901 ttcgtgctct gtgaagtgga ggaacgcagc tcgtccgagg tggcgcaaat cgtgggggca
      961 cccgagggca ccgtgcgaac gcggctcttc cacgcaaaaa agaagctcag ggcgctgctc
     1021 gaacgggagg gcgtccgatg acggacgatc tgctcgctcg cgcggcgcgc gccttgcgcg
     1081 aagagacggt aggcgacgat gcgagcgcac gcttcacgcg ttcgcgcatc atggcgagcg
     1141 tgcacgacga gcgcgtgaag cgccgcacac gctgggcctt tctcgccccc atcgccgcga
     1201 cgttcatcgc tgcgagcgcg tacggcgccg ccacgggcaa gacgcgcgcc gtcgtgcaga
     1261 gcatcacgca cgcactcggc tttcaccgcg acgaaccggc gccgcgagag cccgcgcagc
     1321 agccggccgc tcgtcgccga accgccgagc cgcacgtcgc gtccagcccg gtgccgcttc
     1381 ccgcgccgcc ggcgccgagc gcgacggcag ccgtcgtcga gtcggcatcc cctgatcccg
     1441 cgacgagcgc cgtcgattcg acgagtggtt cggaacccaa gccgccgcgc tcgagggggg
     1501 tcgaaggcat tgctgtcgcc gcggccccgc gttcccttcc cgacgcgggc gccgcggcgg
     1561 cggatccgag cttcgagctt tatcgcgtgg cgcaccgggc gcatttcgtc gagcgtgact
     1621 acgaccgtgc gctcggcgcg tgggacgctt acctcaaggc ttcgccgaac ggcgcgctcg
     1681 cccccgaagc gcgctacaat cgtgcgctct gcctcgtgcg cttgcaccgg agcgaggaag
     1741 cacgggttgc gctcaagccc ttcgcggagg ggcgctacgg cacctaccgg cgcgaggatg
     1801 ctcagaagct gctcgctgcg ctgccggcgg gacctgcggg gccgtaacgc tccctggttc
     1861 tctcgggggc ggcgcccgtt cgcgcgttca gtcgcgatgt gcgctctgcc ttgcgccggt
     1921 ctatacggac gctcgcatgg ctcttctctc cggtcgcagg attttgatca cgggcgtctc
     1981 gcgcggtatc ggcttcgaga cggcgcggct gttcctcgag gaaggcgccg agctcctcgg
     2041 cgtcgcgcgt gacgcggccc ggctcgaacg cgcgcgccag gcgctggatc ccagcggcga
     2101 gcggctgtcg gtcgtcgccg ccgagctcac cggcgaagac gcacccgcgc tgctcgcccg
     2161 agcggtggag gcgcgctggg gagcgctcga cgtgctcttc aacaacgcgg ccgttcagat
     2221 cgacggcgcc gcgcgcggag tgagcacggt ggccgaagcc gtattccagc aatcgctcac
     2281 ggagaacctg gtggcgccat atcgcgtgac gcgagcgctc ttgccgctac tccgccgcgg
     2341 caccgagccg cgcatcgtca acgtgagctc gggcgcgggc aatctcgaga gcatgcaaat
     2401 ggtcgacatc ccgagttatc gcttgagcaa gtgggcgctc aacggcctca cgctgctcct
     2461 cgcgggcgag cttgcgggcg cggtcagcgt caatgccttc gatccgggct gggtcaagac
     2521 cgacctcggc gggccgaacg cacccggcaa gcccgaggaa tccgcgcgcg gcgcgctcgc
     2581 gctcgttacg ttgccgttcg agacgaccgg taaattctgg aaagacggta tccaaatacc
     2641 cttctgaagg ggccgcgcag cgcgctcgtc caagcccgcc gcaggcgcgt ttcgcccgct
     2701 agcgatttgc ggcatcatgc gggcggccgg gcaggccgct ccgcccgggt tggtgcgcat
     2761 gcaagacttt ctgctgatca ttcattttct gggactggcg ctcggcgtcg gcacgagctt
     2821 cgcgacgctg aggctgggac ttgcgaccaa agacttgccg ccggcggaac gcgcgcagtt
     2881 tttcaagcat gctatcgcgc tcggcaagaa cggctcgctg ggactcgcgc tcctgatcgc
     2941 gtccgggctc ggtatgctgt tcacgcgtgg cgtgaccacc gtcttcagct cgggcggcgt
     3001 cgcatttcac gtcaaactca cgctggttct cgtgctcgcg gggctcttgg gcttctcgca
     3061 agtcctggtc aaacgcgtgc gggaaaagca agacgcccag gcgatggcga ccctggcgaa
     3121 ggtcggtcca gtcatgcttt tgacggggct cggcatcgtc gtcgccgccg tcctggcctt
     3181 tcactgacgc gagcagagag gtggctcggc agcggctgct cgtcatcgtc gatcacttcg
     3241 accacgtgag cggcggctac gaggcgcagt tgcgctcggc cttcgaggcg acgtgccaaa
     3301 agcacgacct cgacctactg ctgctcgtgg ggggcgcctt cgacgatccg aatccggtcg
     3361 gcgcggcgca cacccgtgtt tacgagcttt tgagcgaaaa ttcggccgat ggcgcggtgt
     3421 tgttgtcgtc cgggctcacg gcctacacgg gtcccgaacg cctggcggcg cttcgcgcgg
     3481 cgctcggccc gatggcggtt gcgagcgtcg ggcacgtgct gccgggggtg ccgagcgtcg
     3541 tggtcgacaa tcggccgggc atggccgcgc tcgtcgagca cgtcatcacc gtccacggac
     3601 gccgccggct ggcgttcatc ggcggtccgc cgaagaatcc cgacgccgag gcgcgcctct
     3661 ccgtatttcg cgaagtgctc gcgcgccacg agatcgtctt cgaaccgcgg ctctcggcga
     3721 ccggctattt cacggcgccc tccggcggca aggcggcact cgagctgctc gagacggggc
     3781 tgccgttcga cgcgctcatc gtcgccaacg acgccatggc actgagcgcc gtcgaagctt
     3841 tgcgcggccg cagcatgcgc atcccgcgcg acgtcgtcgt gacaggcttc gacgatctcg
     3901 tgctctcgcg gctggcaagt ccgccgctca ccaccgtgcg gcagccgctc gagcgcatgg
     3961 gcgttgccgc cgtcgagctc gtgctcgagc agctgtgggg ccgccccgtt ccggaacgta
     4021 tcgagctgcc ggtcgagttc gtcgcccgcg cgtcgtgcgg ttgcgacgag cgcagctccg
     4081 agcgccgtcg agcggcttcg ctccccgccg cagccgagca cacggacggc gccccgccgc
     4141 tcgaaaggct cgcccagctc acggcgcgtc aaggcgacgc cacgcccgcg ccctgggaag
     4201 cgcgcctgat cgaagcgctc gaagtcgaac tccgcggcac gcccggtgag tttctcgacg
     4261 cgctcgagga cacgctcgac caagcggtcg aggggcagga cgcctacgag cgcttgcaac
     4321 gctgggtcgc gcggctgcgc cgggccggct tgggtgccga cctcgaaacg acctgggagc
     4381 gcgctgaccg cacgatcgac tccgcgatga tgcgctccca agcgcgcttg cgtctcacgg
     4441 ccgacgtctt cttccagaac ctgctccgta gcggcgagcg actctcgacc gcgtcgctcg
     4501 agacgaacac gctccggcgc gtcctcgccg aagagctcgc cgagctccgc atcaagaacg
     4561 cgagtgtttc gctctacgtc aacgctgacc gtcgcgagct cctgccgttt ctgtggctcg
     4621 acgacggcaa agcgcgcgac gtcgagccgc cgggtttccc tgccgcggcg ctcttgccgc
     4681 cgagcgagcc ggagcggcgg cgcagctatt gtgtcttgcc gctgacgtac gagagcgagc
     4741 agctcggcgt ggccgcgttc gagctcggct cggggttcat cgttttcccg atgctcgcgg
     4801 ggcagctcag cgctgcgctg aagaacgtgg cgctgcacca ggaaatcctg cgcacgacga
     4861 cgctccacga gcgcagcgtg caggagcgtt tggcgaccgc cgagcgcatg gcgtcgctca
     4921 gcgtgctcgc gggcggcgtc gcgcacgatc tcaacaacgc gctcggcccg ctcgtcacgc
     4981 tgcccgatgt catcttgtcc gagctcgacg agctcaagca gggcctgctc agcgacgaca
     5041 gcgagctccg cctcgacgtg atgacgatca aatcgtcggc gctccgcgcg tcacagacaa
     5101 tcaaagactt gatgctgctc gggcggcccg gcgcgatgcc caagcagacc ttggacttga
     5161 acgagatcgt ctcgtcggcc acctcgcccg aggcgctgcg ttttctcgcg ccgcgcgccc
     5221 agagcgtccg cgtgcagctc gagctctcgg tggggtcgct gcccgtcgtc gcctcggagc
     5281 cgcacatcgt gcgcgccgtc ggtaacctcg tgcgtaacgc gtcggaggcg atcgccggcg
     5341 ccggacacat ccgcgtgcgg acgtcggccg tcgcgctgcc agtgctgttc ggcgcctacg
     5401 agctgatccc accgggcgag tacgtcacgg tcaccgtctc cgacacgggg cagggtattt
     5461 cgccgagcga cttcacgcgc attttcgagc cgttcttcag ccgcaagcgc ctcgtcgaca
     5521 gcagcggcag cgggctcggc ctcgcgatag tgcacggcgt cgtcaaggag cacgggggct
     5581 acgtcgacgt gacgagcaag gtgggccagg gcacgagctt cacgctctat ttcccgcgcg
     5641 cctcgagcgc gcccatttcc gaacgcgccg tgagcgtggc gcccggcggc tcggcacgca
     5701 ttctgatcgt cgacgacgag cccattcagc tccaggccgc ccgccgtgtg ctgcgccacc
     5761 tcggctatca agtcgaaacg ctgcagagcg gcagcgaggc gctcgcgcgt tttcaaagcg
     5821 aacatcgccg gctcggcggt ggcggctcga tcccgccggg cgcgccgccc ccgttcgatc
     5881 tggtgatctt ggactacgcg ctgaacgaag agcagaacgg gctcgaaacg ctcgagcgca
     5941 tgcggcgtct ctttccgacg cagcgcggta tcatggtgag cgggcacggt cgagccgagc
     6001 acgagggctc cggctcgagc gtcacctggc tgccgaagcc gtatagcgcc gaagccctcg
     6061 cgcgcgtcgt cagacgcacg ctcgaatccg atccgccgcc gagcgttgcg tagctgtctc
     6121 gctcatgccg cgagcggtcg tcgatcggcc gcggcagggt gctcggcggt acgacgatcc
     6181 gcggccccgc gtccggtgtc gcgatctgga accggtcccg gcggataagt tcaccgggga
     6241 cggcttgctc gcacttttca ggcaaaaccg accggtcgct ggcatggagc ccgcctgtat
     6301 gcgagtacct aaggctacta aaacgtggcc tgcggtttct ttttcgccct tcaggttctc
     6361 caggagtcct cttgcaaaag catgtcttcc cccttctagt cggctcgctc acggtcatcg
     6421 cttgttccac cgccaatccg ccggcgggtg acgacgccgt accgataacg ggtgggacga
     6481 cgagcatggg cagcggtggt acgggaacgg gcgggaccgg aaccggcggc accggatcgc
     6541 ccacgacggg tggtaccggc aatacgagca ccggcggcac cggagtcgcg accggcggta
     6601 ctggggtcag tacgggcggt accggagtcg caaccggcgg cactggggtc ggcacgggcg
     6661 gcacgagcat gggcggcatg tcccagggtg cgacgggcgg gacgtcgagc atgtcgggcg
     6721 ccggcggcgg ctctgcaggc ggcggaatgg tgacgtgcag caacaccgac aagagcatcc
     6781 ttcccatcga ctcgaccggt tgggtcgaca agtcgtgcaa cgcgtgcggg atccagggcg
     6841 cattttattg gtacgcggac gccaacacca cgccgagcct catgtgcaac ggcgcggcct
     6901 gcgtggcgaa cgcgccgccg taccaagcgg gagcccctgg gcccggcatg tgtatctccg
     6961 gcaaagcgac cggcacggcg gcggattggg gcgccggcat tggtctcagc ctgaacgaca
     7021 gcggcggcat gacctcggtc aagggttcgt tcgacgcaac caaggcggcg tgcggcaaca
     7081 tcacgggctt cgacatcacg ctgacgggca acacgggcgg catgcccgtc cgcatcggtt
     7141 tcaccacgtc gggtgacggc acgacggtcg cgccgttcat tcccgtcggc gatccagcgg
     7201 gcatgtcgct cgcgctcagc ggcagctcgc aaatcgtgat caagaacgca gtgatcccgg
     7261 cggactggat gaagaccgat ccgtccccgc ccgacccggc gaagatttac gacatgcaaa
     7321 ttcaggtggc cgccgatcag gccaaggcgg gcacgccctt cagtctctgt gtcacgagca
     7381 tcaagccggt taccgacggc agtggcggag gcgggggcgg cgggaactgc aaatcgagca
     7441 gcgtcggcac catcagcagc aacacgggcg tgcaggcgct tggctcctcc gggctcggct
     7501 accagaacaa cgtcaataac ctcgacagcg gctcgcagag cgtgaccggt atgtacggta
     7561 ccggttgcgg cgctctcacc gtgaacacga ccggaatcaa gagcaaaaac gacgccccgg
     7621 cgtcgtatcc ctcgctcgtc gatggctggc actggggcag ctggagcggt gcctacacgc
     7681 agggcagcgt caaagccatc tccgcgctgt cttcggtgaa gagcagcttc gcgttcacgc
     7741 cgcccgccgg gaacaaatgg gacgtgtctt acgacatgtg ggtcgcacag agcgctggca
     7801 tctcggcgcc ggacggcaac acactcgagg tgatggtctg gctcgactac tcgaactccg
     7861 tgacgaccaa ccccatcggc agcaagctca cgacgtcgtt tagcgccgcg ggcacgacct
     7921 gggaagtttg gtacggcgcg acgggcgctt ggcataccgt cagctaccgg cgttcacccg
     7981 gcacggcgcc ggtgaccgat ctcgacctct tggccttcct gaaggatgcc gtcacgcacg
     8041 gcactggctc cacgagctgg aacctcttgt cggtcgaagc aggcttcgag ctcttcgacg
     8101 ccacggccgg cggctcgatc gactcgtact cctgcagcat caactgagct ggaactaaac
     8161 cgacggcgcc cgctcggctt tccacgaagc cggcgagcgc cgtcgccgtt tcgaacaccg
     8221 ttccgacgcg cgagctcagt gttcgcgaac ggcgcccgtc agtcgcgcag gaagtgacag
     8281 gtgtacccgc cgtggtgctt ctcgaggtaa tcctggtgat agtcctcggc cggcgtgaac
     8341 tcgcccgcgt cgacgatttc ggtgacgacc ggacgcttcc atttgccgct cgcgttgacg
     8401 cgggccttca cttcctcggc agtctggcgc tgctcgagtg agctcacgaa gatcgccgaa
     8461 cggtactggg tgcctacgtc gttgccctgt cggttcgccg tcgtcggatc gtgcatgcgg
     8521 aaaaaccagt gctccaagag gtccgcgtag ctcagcttgt tcggatcgaa gatcacgcga
     8581 atcgactcgg cgtggccggt gcgtcccgtc ttgacttgct cgtaaac
//
LOCUS       DATIML010001101         3045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1389319, whole genome shotgun sequence.
ACCESSION   DATIML010001101 DATIML010000000
VERSION     DATIML010001101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1389319"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1164
                     /locus_tag="VLJ38_18905"
     CDS             <1..1164
                     /locus_tag="VLJ38_18905"
                     /inference="COORDINATES: protein motif:HMM:NF024971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease family protein"
                     /protein_id="HSU41659.1"
                     /translation="AASTLADAASTFNVTVPPDKITTSTKYHVELVDCGGAAPSGTAV
                     APRYPTTDDAALGARTTGGLKIVVVPISINNKGPATTDAFYDPFRAYMLAMYPITSIS
                     ITAGTGITVPPPPNTSGGSPDWTQLDWNGALDSMRTKRQADAPAADVYYFGMLMPTDT
                     FQQYCGRGCTAGIGFVTSQNDASRRVAVGIGWSGNQALITMAHEVGHNHGRNHAPCVP
                     QGGSISGVDPMYPYDGASIGVWGYNAQSKQLVNPSGITDIMGYCNNQWISDYTYDGLV
                     TRVAGVDAAARVFVNSDVLARWRTLLLDSRGPRWGLPSEDLEPPAGAAEVAQIFDEHG
                     DVIDYVTVYRTEVSDIGAASIMVPEPQPGWYAIQVSGSVPHPFAAPVAVTRGF"
     gene            complement(1314..2492)
                     /gene="galK"
                     /locus_tag="VLJ38_18910"
     CDS             complement(1314..2492)
                     /gene="galK"
                     /locus_tag="VLJ38_18910"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004335 - galactokinase activity [Evidence
                     IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HSU41660.1"
                     /translation="MSDRAGRLASVVAGFRERFRAEPRVFSAPGRVNLIGEHTDYNAG
                     FVLPMAIAERTYVAAAPRADDTIRVYSLELKKDRSFKLADPWARRGKWLDYIEGVARA
                     LTLRGVNVPGADLYVTSDVPLGAGLSSSAALELAVGLAFNALGAGTLTPYDLALAGRA
                     AENDFVGVRSGAMDQLASALGREGHALFIDCRSLEVTPVPLPKDDVRFVICDTGVRHA
                     HANNGYNERREECERALALLRAAGRPVQSLREVGIEELDALSRILPEPLDRRVRHVVR
                     ENARTSAAVDALKRGHLAGFGRLMNGSHASLRDDYEVSAPELDLIVAQAQREPGVIGA
                     RMTGGGFGGSAVILVDAADVENLFESLTRSFSDKFRRKPDLRIAWASDGVREEPAAGI
                     "
     gene            complement(2489..>3045)
                     /locus_tag="VLJ38_18915"
     CDS             complement(2489..>3045)
                     /locus_tag="VLJ38_18915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41661.1"
                     /translation="FAAGQPADAWAWLDGLATLEPNSREAQRALLSAALREHDVVRER
                     LAREALNKLGEQAPNAAASALSDAVARADLSAARRAALDLHLSSSALALRLAKDAPSI
                     GFEQASSVLAADPSASDAWIAGLAAADELGDRERFELVLRALAPEPLPPSALGLELLA
                     ELVARHTGGDGRAALTQALTGGGK"
BASE COUNT          508 a         1060 c         1030 g          447 t
ORIGIN      
        1 gcggcgagca cgctcgcgga cgcagcctcc acgttcaacg tcacggtccc ccccgacaag
       61 atcacgacga gcacgaagta ccacgtcgag ctcgtcgact gcggcggggc ggcgccgtcc
      121 ggcacggccg tcgctccgcg ctacccgacg acggacgacg cggcgctcgg cgcacgcacg
      181 acgggcggcc tgaaaatcgt cgtagtcccc atcagcatca acaacaaagg gccggcgacg
      241 accgacgcct tttacgatcc cttccgcgcc tacatgctgg cgatgtaccc catcacgagc
      301 atctccatca ccgccggcac gggcatcacg gtgccaccgc cgccgaacac gtcgggcggt
      361 tcccccgatt ggacgcagct cgactggaac ggcgccctcg actccatgcg gaccaaacgc
      421 caagccgacg cgcccgcggc cgacgtttac tacttcggca tgctcatgcc gacggatacg
      481 ttccagcagt attgcgggcg cggctgcacg gcaggcatcg gcttcgtgac ctcacaaaac
      541 gacgcctcgc gccgcgtcgc ggtcggcatc ggctggagcg gcaatcaagc gctcatcacg
      601 atggcgcacg aggtcggcca caatcacggc cgcaaccacg caccttgcgt gccgcaaggc
      661 ggctccatca gcggggtcga tcccatgtac ccctacgacg gcgcgtcgat cggcgtgtgg
      721 ggttacaacg cgcagtcgaa gcagctcgtc aacccgagcg gtatcaccga catcatgggg
      781 tactgcaaca accagtggat cagcgactac acgtacgacg ggctcgtcac ccgagtcgct
      841 ggcgtcgatg ccgccgcgcg tgtcttcgtc aattcggacg tgctcgcccg ctggcgcacg
      901 ctcttgctcg atagccgcgg accgcgctgg ggtttgccga gcgaggacct cgagccgcct
      961 gcgggcgcgg cggaagtcgc ccagatcttc gacgagcacg gcgacgtgat cgactacgtc
     1021 acggtgtatc gcacggaggt ctccgacatc ggcgcggcct cgatcatggt gccggagccg
     1081 cagccgggct ggtacgcgat tcaggtgagc ggctccgtgc cgcatccatt cgccgcaccc
     1141 gtcgcggtga cccgcgggtt ctaaccgctg cgggggaaaa cggcagggga aaaaccgcca
     1201 agacgccaag aatttgaatg atgaaccgga acgatcagac cctggttaga tcccaaaaaa
     1261 ccttggcgtc cttggcgtct tggcggttca aatccccagc gccgtccggc ggttcaaatc
     1321 cccgccgcgg gctcctcgcg cacgccgtcg ctcgcccagg cgatgcgcag gtcgggcttg
     1381 cggcggaatt tatcgctgaa gctgcgcgtg agtgactcga acaggttctc gacgtcagcc
     1441 gcgtcgacga ggatgacggc cgagccgccg aacccgccgc cggtcatgcg cgcgccgatc
     1501 acgccgggtt cgcgctgcgc ctgtgccacg atcaaatcga gctccggagc gctcacttcg
     1561 tagtcgtcgc gtaacgacgc gtgcgagccg ttcatgagcc gcccaaagcc agcgagatgg
     1621 ccgcgcttga gcgcatccac ggcggcggag gtgcgcgcgt tttcgcgcac gacgtgccgc
     1681 acgcgccggt cgagcggctc cggcaagatg cggctgagcg cgtcgagttc ctcgatcccg
     1741 acttcgcgca agctctgcac gggacgcccc gctgctcgca gtaaagcgag cgcccgctcg
     1801 cactcctcgc gacgctcgtt gtagccgttg ttcgcgtggg cgtgccgcac gcccgtgtcg
     1861 cagatgacga agcgcacgtc gtctttcggg agcggcaccg gcgtcacctc gagcgagcgg
     1921 cagtcgatga agagcgcgtg tccttcgcgg ccgagcgcgg aggcgagttg gtccatcgcg
     1981 ccggagcgga cgcccacgaa gtcgttttcc gccgcacggc ccgcgagggc gagatcgtag
     2041 ggcgtgaggg tgccggcgcc gagcgcattg aaagcgagtc cgacggcgag ctcgagcgcg
     2101 gccgaggagg agagaccggc gccgagcggc acgtcggaag tgacgtaaag gtccgcaccc
     2161 gggacgttca cgccgcgcaa agtgagcgct cgcgccacgc cctcgatgta gtcgagccat
     2221 ttgccgcggc gcgcccaggg gtcggctagc ttgaagctgc gatccttttt gagctcgagc
     2281 gagtagacgc gaatggtgtc gtccgcgcgc ggcgcggccg cgacgtaggt gcgctcggcg
     2341 atcgccatcg gcagcacgaa cccggcgttg tagtcggtgt gctcgccgat caggttcacg
     2401 cggcctggcg ccgaaaacac gcggggctcc gcgcgaaagc gttcgcgaaa tccggccacg
     2461 acgctcgcga gacgcccagc gcgatcgctc atttgccccc acccgtgagc gcctgggtca
     2521 gcgccgcgcg tccgtccccg ccggtgtggc gcgcaacgag ctcggccaaa agctcgagtc
     2581 cgagcgcgct cggcgggagc ggctcgggag cgagtgcgcg gagcacgagc tcgaagcgct
     2641 cccgatctcc gagctcgtcg gccgcagcaa gacccgcgat ccaagcgtca cttgcgctcg
     2701 gatcggcggc gaggacggag cttgcttgct cgaacccgat actcggcgcg tctttggcga
     2761 gccggagcgc gagcgcgctg ctcgacaggt gcaagtcgag cgcggcgcgg cgggccgcgg
     2821 acaagtcagc gcgcgcgacg gcgtcactca gcgcgctcgc cgccgcattc ggcgcttgct
     2881 caccgagttt attgagcgcc tcgcgcgcga ggcgttcgcg caccacgtcg tgttcacgca
     2941 gcgcggccga cagcaacgca cgttgggctt cacgtgagtt cggctcgagc gtcgcgagcc
     3001 cgtcgagcca cgcccaggcg tcggcgggct ggcccgcggc gaaga
//
LOCUS       DATIML010001102         2174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4273391, whole genome shotgun sequence.
ACCESSION   DATIML010001102 DATIML010000000
VERSION     DATIML010001102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4273391"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VLJ38_18920"
     CDS             <1..479
                     /locus_tag="VLJ38_18920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41662.1"
                     /translation="LRGRSELLLSAGESFHAPDEDAVRAPSAPPPSAPLPSEAAPSTA
                     ERTASEPRPAVNTRGGSRPGSASEEAHACPSATLFQDGVQAFKRGEYGTAAALLERFS
                     AACGHGNHGEDAAYLRMVALARAGRRAEARAQAAAYLSAFPNGFRRKEAEKLVESR"
     gene            complement(520..1677)
                     /locus_tag="VLJ38_18925"
     CDS             complement(520..1677)
                     /locus_tag="VLJ38_18925"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU41663.1"
                     /translation="MVSTATAAAAPLKLGVFCDLLEERWFSMDLLAEMLLTEGGRLPG
                     VELERVRPALPALLARAASPRGERTLERWGYRLGLGFGRYVQYPLRALRERSRHDFFH
                     IADHSYGHLALELPRERVGIYCHDLDAFRPVLDGSRASRLKLGAVAHTLLAGLRRARV
                     VFHSSRTVGEELRAQRIVPPERLVHAPYGVAAEFQPEPGALDAELAGRPPFVMHVGSL
                     IPRKNPEFLVPLIVEILRARPELEMFQMGGTWTESQRGELERGGVLGRVHQFSYLARP
                     ELSAYLRATRAVVLPSLAEGFGLPVVEALACGAPVVANDIPVLVEVGGEGVVVRRADS
                     VAAYAAAVLHVVDGGGPAREARLQAAARYTWAVHARTIVETYRGLAGRSAE"
     gene            complement(1762..>2174)
                     /locus_tag="VLJ38_18930"
     CDS             complement(1762..>2174)
                     /locus_tag="VLJ38_18930"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU41664.1"
                     /translation="GLQYMIQRLVRGEAVELYDGGEAMRDYLYVDDVCRALKTCVERA
                     PLGEIVNVGSGVPLAVGELVEYCRLRLGSQSRVERVETPAFRRQVQARDFWLDVTRLT
                     RLGFAPSVDFQSGLDRVMDAELALAGKLPLPARP"
BASE COUNT          393 a          791 c          722 g          268 t
ORIGIN      
        1 ggttgcgcgg tcgcagtgag ctgctgctct cagcgggcga gagtttccat gcaccggacg
       61 aagacgccgt ccgagctccg agcgctccgc cgccgagcgc tccgctcccg agcgaggccg
      121 ccccgagcac ggccgaaagg acagcgagcg aaccccgtcc agcggtgaac acccgcggcg
      181 gttcacgccc aggttcggcg agcgaggagg cgcacgcctg tccaagcgcg acgttgttcc
      241 aggacggcgt gcaggcgttc aaacgcggcg agtacgggac ggcagcggct ttgctcgagc
      301 ggttctccgc cgcgtgcggc cacggcaacc acggcgagga tgcggcgtat ttgcgaatgg
      361 tggcgctcgc tcgcgccggc cgtcgtgcgg aagcgcgggc ccaagccgca gcgtacctct
      421 cggccttccc gaacggcttc aggcgtaaag aagctgaaaa gctcgtcgaa tcacgctagc
      481 ccgtcgcgcc ccaccgcccg gaacagcgac ggactcggat tactcggctg accgccccgc
      541 gagcccgcga tacgtctcga cgatggtgcg cgcgtggacg gcccacgtgt aacgcgccgc
      601 cgcctgcagt cgcgcctcgc gcgcggggcc accgccgtcg acgacgtgga gcaccgccgc
      661 agcatacgcc gcgacggagt ccgcacggcg cacgacgacg ccctcgccac cgacctcgac
      721 cagtaccgga atgtcgttcg ccacgacggg cgcaccgcac gcgagcgctt cgaccaccgg
      781 taagccgaag ccctcggcga ggctcggcag caccacggcg cgcgtcgcgc gcaaatacgc
      841 ggagagctcc ggccgcgcca ggtacgaaaa ctgatgcacg cgcccgagca cgcccccacg
      901 ctcgagctcg ccgcgctgcg actccgtcca ggtgccgccc atctggaaca tctcgagctc
      961 cgggcgcgcg cgcaaaatct cgacgatgag cggcacgaga aattcggggt tcttccgtgg
     1021 gatcaagctg cccacgtgca tcacgaacgg cggacgccca gcgagctcgg cgtcgagcgc
     1081 gccgggctcc ggctgaaact ccgcggcaac accgtaaggc gcgtgcacga gccgctcggg
     1141 aggcacgatg cgttgcgcgc gaagctcctc gcccaccgta cggctcgagt gaaagacgac
     1201 gcgcgcccgg cgcaagcccg cgagcagcgt gtgcgcgacg gcgccgagct tcaaacgtga
     1261 ggcgcgcgac ccgtcgagca ccggcctgaa ggcgtcgaga tcatggcaat aaatgccgac
     1321 acgctcgcgc ggcagctcga gcgcgaggtg gccgtagctg tgatcggcga tgtgaaaaaa
     1381 atcgtgacgc gagcgttcgc gcagcgcccg gagcggatac tgcacgtaac gcccgaagcc
     1441 gaggcccaag cgatagcccc agcgttcgag cgtgcgttca ccacgcgggc tcgccgcgcg
     1501 cgcaagcagc gcgggcagcg cgggccgcac gcgctcgagc tcgacgcccg gcagccgtcc
     1561 accctcggtg agcagcattt cggccagcaa gtccatgctg aaccagcgct cttccaagag
     1621 gtcgcaaaac acgccgagct tcagcggagc ggcagcggcc gtcgcggtcg aaaccatcgc
     1681 gggacgcgag tctactcgcc cgaacggcgc acggcgagtg gcggcaacac ctagacgcaa
     1741 cgcgaatttc tgacagtgct gctacggacg ggccggaagc ggcagcttac cggctagcgc
     1801 gagctccgcg tccatcacgc ggtcgagccc gctctggaaa tcgacgctcg gtgcgaagcc
     1861 gaggcgcgtg aggcgcgtca cgtcgagcca aaaatcgcgc gcctgtacct gccgccgaaa
     1921 agccggtgtc tccacgcgct cgacgcggct ctgcgagccc agccgcagac gacaatactc
     1981 gacgagctcg cccacggcga gcggcacgcc gctgcccacg ttcacgatct ctccgagcgg
     2041 cgcccgctcg acgcacgtct tcagcgcgcg acacacgtcg tccacgtaga ggtaatcgcg
     2101 catggcctcg ccgccgtcgt aaagctcgac cgcctcgccc cgcacgagcc gctgaatcat
     2161 gtattgcagc ccat
//
LOCUS       DATIML010001103         2497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5719566, whole genome shotgun sequence.
ACCESSION   DATIML010001103 DATIML010000000
VERSION     DATIML010001103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5719566"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..973)
                     /gene="pqqB"
                     /locus_tag="VLJ38_18935"
     CDS             complement(71..973)
                     /gene="pqqB"
                     /locus_tag="VLJ38_18935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HSU41665.1"
                     /translation="MLIRVLGSAAGGGFPQWNCGCDNCRAVRGGSSAFRARTQEAVAV
                     SADGDAWFLINASPEIRSQIESFERLWPRAARHSPIAGLLLTNGDLDHCLGLFSLRES
                     HPLVVHATDSVRAGLVEDNVLYRTLERFPGQVTWQRFALGEEQPLGDGTLRVTAVAVP
                     GKVALHLEGRRAPSAGDNVGFVIRDTQSGGKLAYFSGVAGPSDALSRSLEGASVVFFD
                     GTFWSSDELIRAGLGTRRAEDMAHWPTGGSEGSLGLLARQSGRRYLIHVNNTNPVLRE
                     DGEQRRTALLAGVDVAHDGLELSC"
     gene            complement(987..1130)
                     /locus_tag="VLJ38_18940"
     CDS             complement(987..1130)
                     /locus_tag="VLJ38_18940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41666.1"
                     /translation="MSWETPSFVEINMNAEIGGYNPDFDDREPNEPVVSEEVQPSGSA
                     LER"
     gene            1349..2416
                     /locus_tag="VLJ38_18945"
     CDS             1349..2416
                     /locus_tag="VLJ38_18945"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSU41667.1"
                     /translation="MLLLRISRGAARRARALLCLTALTAIPACGHAHSELYVSAEDSG
                     EVLVVDADRGEVTAHIAVGKRPRGMKLSHDGKLLYVALSGSPRGGPGVDESKLPPPDR
                     SADGIGVIELGSRKLLRTLPSGQDPEAFDLSPDDKTLFVSNEETAEMSVLDLVSGTIR
                     AKVAVGREPEGVSVRPDGNAVYVTSEGDSAVFAIDTHSLSVLARIPTGARPRAVAFSK
                     DGATGFVTCENGGAVTVFDTAKNAVTGSVTVAAGAESAPPARPMGAVLAPDGRTLYVS
                     TGRGGSVAVIDVGARRVTRQFEKVGARPWGIGVSADGKHVFTANGPSNDVSVIDSATG
                     QVEKRIAAPRLPWGLVVAAKH"
BASE COUNT          407 a          878 c          850 g          362 t
ORIGIN      
        1 tagcggcgct gcccttccgc ccgcagccgc gcgacgaatt cgtcgttgcc gagcagcgtg
       61 ttcgccatgc tcagcacgaa agctcgaggc cgtcgtgggc gacatcgacg ccggcgagca
      121 gtgccgtccg tcgctgctcg ccgtcctcgc gcagcacggg gttggtgttg ttcacgtgga
      181 tcaagtagcg ccgcccgctc tggcgcgcga gcaggccgag acttccctca ctcccacccg
      241 tcggccagtg cgccatgtcc tcggcgcgtc gcgtcccgag cccggcgcga atcagctcat
      301 cgctcgacca gaacgtgccg tcgaagaaca cgacgctcgc gccctcgagc gagcgcgaga
      361 gcgcgtcgga aggtccggcg acgcccgaga agtaagcgag cttgccgccg ctctgtgtgt
      421 cgcgaatgac gaacccgacg ttgtcgccgg ccgaaggcgc gcgccgcccc tcgaggtgga
      481 gcgccacctt gccgggcacc gcgaccgccg tcacacgcag ggtgccgtcg ccgagcggct
      541 gctcctcacc gagcgcaaag cgctgccacg tcacctgacc gggaaagcgc tcgagggtgc
      601 gatagagcac gttgtcctcg acgagcccgg cgcgaacgct gtcggtcgcg tgcaccacga
      661 gcgggtgcga ctcgcgcagc gagaacagcc cgaggcaatg atccaaatcg ccgttggtga
      721 gcaagagccc ggcgatcggc gaatgccgcg ccgcgcgtgg ccacaagcgt tcgaacgact
      781 ctatctgcga gcgaatctcg ggcgacgcat tgatcaagaa ccacgcgtcg ccgtcggcgc
      841 tcacggcgac cgcttcctgc gtgcgggcac gaaaggccga gctaccgccc cggaccgcgc
      901 ggcaattgtc acaaccacaa ttccactgcg gaaaaccgcc gcccgccgcg gaaccgagga
      961 cgcggatcag cacgagaccc ggctgctcag cgctcgagcg cggagccgct cggctgcact
     1021 tcttcggaaa cgaccggctc gttcggctcg cggtcgtcga agtcgggatt gtagccgccg
     1081 atctcggcgt tcatgttgat ctcgacgaac gaaggagttt cccagctcat gtgagaagca
     1141 ttacgcgcgg cggagggtgc gtcaaccgcg cgaagcgcct caagaaggcg tgcaggagcg
     1201 ctcgcgtggc ggcgcatttt gtcttcacgc cggggaaaat ggcgcggggg tccagaatgt
     1261 tccgtcggcg cttcagctcg aggcccggat cgctcagctc gaggccggat tgcagtgggc
     1321 tgtcggcgat ggcaagtcgc cgatctccat gcttctcctg cgaatctcgc gcggagccgc
     1381 tcggcgcgcg cgtgcgctgc tttgcctcac cgcgctgacg gccatcccag cgtgcggaca
     1441 cgcccactcc gagctctacg tgagcgccga ggacagcggc gaagtgctcg tcgtcgatgc
     1501 cgaccgcggc gaagtcacgg cgcacatcgc cgtcggcaag cgcccccggg gcatgaagct
     1561 ctcccacgac ggcaagctcc tttacgtcgc gctctcgggc tcgccgcgag gcggcccggg
     1621 cgtggacgaa tcgaagctcc cgccccccga ccgcagcgct gacggcatcg gcgtcatcga
     1681 gctcggcagc cgcaagctct tgcgcacgct gccgagcggc caggatcccg aagcgttcga
     1741 cctttcgccg gacgacaaga cgctcttcgt gtcgaacgaa gagaccgcgg agatgagcgt
     1801 gctcgacctc gtgagcggca cgatccgcgc gaaggtcgcc gtcggtcgcg agccggaggg
     1861 cgtgagcgtg cgacccgatg gcaatgcggt gtacgtgacg tccgaaggcg acagcgccgt
     1921 gttcgcgatc gatacgcact cgctgagcgt gctcgcccgc atccccacgg gcgctcgccc
     1981 ccgcgccgtc gcgttctcca aagacggcgc gaccggcttc gtcacctgcg aaaacggcgg
     2041 cgccgtcacc gtcttcgaca cggcaaagaa cgccgtcacc ggcagcgtga cggtcgccgc
     2101 aggcgccgag agcgctcccc ccgcgcggcc gatgggcgcg gtgctcgcgc ccgacggacg
     2161 caccctttac gtctcgacgg gacgcggcgg ttccgttgcc gtcatcgacg tgggcgcgcg
     2221 acgcgtgacg cgccagttcg aaaaagtcgg cgcgcgtccc tggggcatcg gcgtgagcgc
     2281 ggacggcaag cacgtcttca ccgcgaacgg cccgtccaac gacgtgtccg tcatcgacag
     2341 cgcgacgggc caagtcgaaa agcgcatcgc ggcgccgcgt ttgccgtggg gcctcgtcgt
     2401 cgcggccaaa cattgacgtc gcgcccgcac gttggctgcg gcgtcagatc gacgaggcgt
     2461 ttgagtcagc ggcagcggca ggggtagggc tgcggcc
//
LOCUS       DATIML010001104         7148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_520769, whole genome shotgun sequence.
ACCESSION   DATIML010001104 DATIML010000000
VERSION     DATIML010001104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7148
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520769"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..1211)
                     /locus_tag="VLJ38_18950"
     CDS             complement(57..1211)
                     /locus_tag="VLJ38_18950"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU41668.1"
                     /translation="MGRPGAHGGTLSAVEVIAVALGMGALAGAAWLPPKATRVSGALF
                     GGLIAFALARIAWGIPLGAAASVSFAIVLFRFAPGTVLRRVTFLVPSLLLLVFVTTLL
                     MYHAPGSPFAGEKVASPQVEAALRAHFGVPKSAVEFFGIYLRRLLVEGSLGPSVKVQG
                     RNVEALLRPALPVSIALGLLALVIASALGLWLGIVAGLKPNSAADYASTGLSALGLAL
                     PSFVIGAIGIVVFALKLGWLPVAGWGDLRHIVLPAVTLALPYAAYIARLARGGTIEVM
                     SQDFIRTARAKGVPESAVVLRHALKGAILPVVSYLGPAAAGIMTGSFVVETLFGIPGM
                     GQWFVRGAINRDYSVVLGTAIVYFGLVILFNLLVDLAYAWLDPRLRSSGP"
     gene            complement(1178..3190)
                     /locus_tag="VLJ38_18955"
     CDS             complement(1178..3190)
                     /locus_tag="VLJ38_18955"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HSU41669.1"
                     /translation="MYRTLLGILSVFGGALLLVALTFSRTLEAPADLRLANGTEPKSL
                     DPELTIGEPEHVLASALFEGLTRIDGKTGKPVAGVAESWDISPDGTVYTFHLRGNARW
                     SDGRPVTAGDFVYSWKRLLDPAVGAEYAYMLFPIALAEAYNTFAGHAETLEKELLPAV
                     SALASKTPLDANSWQEFLRQNKVNDPLRPVDDDVLGELLARRTGSLTANDLATFRARL
                     EHARTWLHDESVRARAHFGVDHGVVARDARTLVVELRAPTPYFLQVLAHNSSMPVPRW
                     ALAAHGDRWFLPGNIVSNGPFRLGSWIVNDHIRLEKNPMYWAKDEVRLERVDMLSNEN
                     QMTNLNLYLTGALDCTNRYFPLELAPELKKRPDFEQAPGLVVYFYRLNLTRKPLDDKR
                     VRKAINLAIDRELITKNVLGLGQPPAYTFVPPGLPGYAPPATAIRHDPVEARRLLAEA
                     GYPDGKGFPRIGILYNTMEDHKRLAEVVSDQLRRTLGIDVNPYNQEWQSYLEAGRALN
                     YDISRGAWGADYADPNTFLDMFVTNGANNQTGFSSELYDRLIHLAADVSLLARDPEPV
                     LAKVREPAPLRTLLEGTQRGSPAERQHAREQLRLLLLREAEAILVDDEFPIVPVYFYV
                     NGILKQPRVHGYSMHLLLDDGSFGPNLQDAHPLRDVWVDPGRTGVP"
     gene            complement(3238..4758)
                     /locus_tag="VLJ38_18960"
     CDS             complement(3238..4758)
                     /locus_tag="VLJ38_18960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HSU41670.1"
                     /translation="MRAHDFPIDLDPQDDAPLFVQISSSLARDIARGRLRPGDALPGT
                     RTLAETLGVHRSTVVTAYAELTAQGWVATRPGGATFVAASLPDVKPRRFAPRATKAGV
                     ADTTGFELEPAFVRPQQIPQLPPGGLYLWGGMPDPRLVPLDLLARAYRRVAQRQGRAL
                     FSYSADTYGHEMLRRAIARLATDARGLAATADNVLITRGSQMALDLSARSLIRPGDVV
                     AVEALGYPNAVNVFRRAGAVVVPVRVDQHGIDVNALVALAREKTLRLIYVTPHHQYPT
                     TVTLSATRRLALLDLARREHIAVLEDDYDQEFHYDGRPVLPLASSDPTGNVIYVGTLA
                     KILAPGLRLAFVVAPAPLLARMAAERALIDRQGDAVLECSIAELIDDGDVERHVRRTR
                     RIYRSRRDAFCENLERELGGVIRFRRPPGGMAIWADVAPELDVEAWQECARQRGVYFQ
                     IGRQFALDGAPIQSVRFGFAFLDEKESATGIRRLGEAASDLRGRALPRARRRRVAR"
     gene            4854..5546
                     /locus_tag="VLJ38_18965"
     CDS             4854..5546
                     /locus_tag="VLJ38_18965"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSU41671.1"
                     /translation="MTPRTEVHRRPARASYERALAYTLFDEALVANVAFSQDGQPFVL
                     PMMFARLDDRLVLHAASKSRFATHLASGAPVCVSVTLLDGVVLARSAMHHSANYRSAV
                     AFGCAVELTVDADKLAALARLLEHVLPGRSLACRPPNALELKATRVFALALEEVSVKQ
                     RAGGPLDDEEDLMLPYWAGVVPLAVRAGVPVPDLAHAPRAEEPGGLRAYERRTAGEPS
                     NDSATAVAEAQP"
     gene            5543..5998
                     /locus_tag="VLJ38_18970"
     CDS             5543..5998
                     /locus_tag="VLJ38_18970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSU41672.1"
                     /translation="MSDVRIPFETAPEAREALRGLEQYLTRASLPRELLELVKLRVSL
                     LNGCAFCVNMHWTNLRAAGESEQRLYSLAAWREQSGYSPRERAALAWAESLTHVAETS
                     VPDADFIEVSAHFSPKEIADLSYAIAAINAWNRLCVAFRIPPEPPLPER"
     gene            6045..6644
                     /locus_tag="VLJ38_18975"
     CDS             6045..6644
                     /locus_tag="VLJ38_18975"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HSU41673.1"
                     /translation="MTKTIGIYVFDEVEVLDFAGPFEVFSTAARVASRVSNAPPPFSV
                     TLVADRVREVRARGGLRVVPSAGFSDHPAFDVLLVPGGDVSAELERTHVIAWIAELAK
                     RASLTASVCTGAFLLAKAGLLGGRRVTTHWEDAADLQRSFPELMVEKDVPWVDAGDVV
                     TSAGISAGLDMSLHLVARLASSELAERTARQMDYVWRQR"
BASE COUNT         1173 a         2309 c         2530 g         1136 t
ORIGIN      
        1 gatcgccacg cgattgcgca gcagccgctg cattgccaga cgaaagggac tgcgcttcat
       61 gggccgctgc tccgcaaccg cggatcgagc caagcgtaag ccaagtccac gagcaggttg
      121 aacaagatga ccagaccgaa atagacgatc gcggtgccca ggacgacgga atagtcgcgg
      181 ttgatcgcgc cgcgcacgaa ccactggccc atgcccggga tgccgaacag cgtctcgacc
      241 acgaacgagc ccgtcatgat gcccgccgcc gcggggccga ggtacgaaac gacgggcaaa
      301 atggcgccct tgagcgcgtg tcgcagcacg acggccgact cgggcacgcc cttggcgcgc
      361 gccgtgcgaa tgaaatcctg ggacatcacc tcgatggtgc cgccacgcgc gagccgcgcg
      421 atgtacgccg cgtacggcaa cgccagcgtg acggcgggca gcacgatgtg ccggagatcg
      481 ccccagcccg cgaccggcag ccaaccgagc ttgagcgcaa agacgacgat gccgatcgcg
      541 ccgatcacga agcttggcag cgcaagtcca agcgccgaaa gccccgtgct cgcgtagtcc
      601 gcggcggagt tcggcttgag gccggccacg atgccgagcc agagcccgag cgccgacgcg
      661 atcacgagcg ccaggagccc gagcgcgatg ctcacgggca gggccgggcg caagagcgcc
      721 tcgacgttcc gcccctgcac cttcactgac ggaccgagcg acccttcgac gagcagacgt
      781 cgcaggtaga tcccgaaaaa ctcgaccgcg ctcttcggta ccccgaagtg cgcgcggagc
      841 gccgcttcca cttgcggcga cgctactttt tccccggcaa aggggctgcc gggcgcgtga
      901 tacatgagga gcgtcgtcac gaacacgagt aggagcagcg agggcacgag gaacgtcacg
      961 cgccggagca ccgtgcccgg cgcgaagcga aagagcacga tcgcgaagct gacgctcgcg
     1021 gcggctccga gcgggatgcc ccacgcgatg cgtgcgagcg caaacgcgat gagcccgccg
     1081 aacagcgcgc ccgagacgcg cgtcgccttc ggcggtagcc atgcggctcc ggcgagcgct
     1141 cccatgccga gcgcgaccgc gatgacctcg accgcgctca gggtaccccc gtgcgccccg
     1201 ggtcgaccca tacgtcgcgg agcggatgcg cgtcttgaag gtttggcccg aagctgccgt
     1261 cgtcgagcag taggtgcatc gaatagccgt gaacgcgcgg ctgcttgagg atgccgttca
     1321 cgtaaaagta gacgggaacg atggggaatt cgtcgtcgac gaggatagct tcggcttcac
     1381 gaagcaggag taggcgcagc tgctcgcggg cgtgctggcg ctctgcggga ctgccgcgtt
     1441 gcgtgccctc gagcagggtt cgaaggggtg cgggttcgcg aacttttgcg agcacgggtt
     1501 cggggtcgcg tgccaggagc gagacgtcgg ccgccaggtg gatcaaccgg tcgtagagct
     1561 cggagctgaa gccggtctga ttattggcgc cgttcgtcac gaacatgtcg aggaaggtgt
     1621 tgggatcggc gtagtcggcg ccccaggcgc cgcgcgagat gtcgtaattg agcgcgcgac
     1681 ccgcttcgag atacgactgc cactcctgat tgtaggggtt cacgtcgatg ccgagcgtcc
     1741 tacgcagttg atcgctcacc acctcggcga gccgcttgtg gtcctccatc gtgttgtaga
     1801 ggatgccgat gcggggaaag cccttgccgt cggggtaacc ggcttcggcg agcaggcgcc
     1861 gtgcttcgac gggatcgtgg cggatggccg tggcaggcgg cgcataaccg ggcaggccgg
     1921 gcggcacgaa ggtgtaagcc ggcggttgtc cgagcccgag cacgtttttg gtgatgagct
     1981 cgcgatcgat cgcaagattg atggcttttc gcacgcgctt gtcgtcgagc ggcttgcgcg
     2041 tgaggttcag ccgataaaag tagacgacga gtccaggcgc ttgctcgaaa tcgggccgct
     2101 ttttgagctc gggcgcgagt tccaggggaa agtagcggtt ggtgcagtcg agcgcgcccg
     2161 tgagatagag attcaggttc gtcatctggt tctcgttcga gagcatgtcg acgcgctcga
     2221 ggcgaacctc gtctttggcc caatacatcg ggttcttttc gagtcggatg tggtcgttga
     2281 cgatccagct cccgagccga aacgggccgt tcgagacgat gttaccgggc aagaaccagc
     2341 gatcaccgtg cgccgcgagc gcccagcgcg gcacgggcat gctcgaattg tgcgcgagca
     2401 cctgcagaaa atacggcgtc ggcgcgcgca gctcgacgac gagcgtgcgc gcgtctcgcg
     2461 cgaccacgcc gtgatcgacg ccgaaatgcg cgcgcgctcg tacgctctcg tcgtggagcc
     2521 aagtccgcgc gtgctcgagc ctcgcgcgaa aggtcgcaag gtcgttcgcc gtcaggctgc
     2581 cggtccgccg cgcgaggagc tcgccgagca cgtcgtcgtc gacgggacgc aagggatcgt
     2641 tgactttgtt ttggcgcaag aactcctgcc acgagttggc gtcgagcggg gttttcgacg
     2701 cgagcgccga gacggccggc aggagctctt tttcgagcgt ttccgcgtga cccgcgaagg
     2761 tgttgtaggc ctcagcgagc gcgatcggaa acagcatgta cgcgtattcg gcgcccaccg
     2821 cggggtcgag caggcgcttc cacgagtaga cgaagtcgcc ggcggtcacg ggccggccgt
     2881 cgctccaacg ggcgttcccg cggagatgaa acgtgtagac ggtgccgtcc ggcgagatgt
     2941 cccagctttc ggcgacgcca gcgaccggct tgcccgtctt gccgtcgatg cgcgtgaggc
     3001 cctcgaacag ggccgaggcg agcacgtgct ccggttcacc gatcgtgagc tcgggatcga
     3061 gcgacttcgg ttcggtgccg ttcgcgagcc tcaagtccgc gggcgcttcg agcgtcctcg
     3121 agaacgtgag cgcgacgagc aggagcgcgc cgccgaagac cgagagaatt ccgaggagcg
     3181 tgcggtacat cggcgggcgt tgctggcgag atgatagacc gagacgcgtg gcgctgctca
     3241 gcgcgcgacc cggcgccggc gggcgcgcgg cagagctcgg ccgcgcaggt ccgaagccgc
     3301 ttccccgagc cggcgaatcc cggtggcgct ctctttttcg tcgaggaacg cgaagccgaa
     3361 gcgcacgctt tggatcggcg cgccgtcgag cgcgaactgc cggccgattt ggaaatagac
     3421 gccgcgctga cgcgcgcact cctgccacgc ttcgacgtcg agctcgggag caacgtcggc
     3481 ccagatcgcc atgccgccgg gtggacgccg aaaccgaatc acaccgccga gctcgcgctc
     3541 gagattttcg cagaaagcgt cgcgtcgcga gcgataaatc cggcgcgtgc ggcgcacgtg
     3601 gcgttccacg tcgccgtcgt cgatgagctc ggcgatcgaa cattcgagca ccgcgtcgcc
     3661 ctggcgatcg atgagcgcgc gttcggccgc catgcgcgcg agcagcggcg ccggcgcgac
     3721 gacgaacgcg aggcgcaagc cgggcgccag gatcttggcg agcgtaccga cgtagatcac
     3781 gttgccggtc gggtcgctac tggcgagcgg cagcacgggg cgcccgtcgt agtgaaactc
     3841 ctgatcatag tcgtcctcga gcacggcgat gtgctcgcgc cgcgcgaggt cgagcagcgc
     3901 gagccgtcgc gtcgccgaga gcgtgacggt cgtcgggtat tggtggtggg gggtgacgta
     3961 aatcaggcgc agcgtctttt cgcgggcgag cgcgacgagc gcattgacgt cgatgccgtg
     4021 ctgatcgacg cgcacgggca cgaccacggc gcccgcgcgg cgaaagacgt tcacggcgtt
     4081 cgggtagccg agcgcctcca ccgcgacgac gtcgccgggc cgaatcaagc tgcgggcgct
     4141 cagatccagc gccatctggc tgccacgcgt gatgaggacg ttgtcggccg tggcggcgag
     4201 cccgcgtgcg tccgtcgcga gccgtgcgat cgctcggcgc aacatttcgt ggccgtaagt
     4261 gtctgcgctg tagctgaaca gcgcgcgacc ttgtcgttgc gcgacgcgcc ggtacgcgcg
     4321 cgccaaaagg tcgagcggga ccaggcgcgg atcgggcatg ccgccccaga gatacaggcc
     4381 cccgggcggc aactggggga tctgctgcgg gcggacgaac gccggctcga gctcgaagcc
     4441 cgtcgtgtcg gccacgcctg ccttcgtggc cctcggcgca aagcgacgtg gcttcacgtc
     4501 cggtaacgac gcggccacga acgtcgcgcc gcccggtcgc gtggcgaccc aaccctgcgc
     4561 cgtgagctcg gcgtaggccg tcacgacggt gctccggtgc acgccgagcg tctccgccag
     4621 cgtgcgcgtg ccgggcagcg cgtcgccggg ccgcaaacga ccacgtgcga tgtcgcgcgc
     4681 gagcgagctc gagatctgga cgaagagcgg ggcgtcgtcc tgcgggtcga ggtctatggg
     4741 gaaatcatgg gcgcgcatgg taactggtcg gtgcaaattc gcgtaactgg tcgtttccag
     4801 actaccagtt ttgccccagg tttcacagca tggaagctcg ctcgagtttc gccgtgaccc
     4861 cacgcaccga agtccatcgc aggcccgcgc gcgccagcta cgagcgcgcg ctcgcctaca
     4921 ccctgttcga cgaagcgctg gtcgcgaacg tcgcgttcag ccaggacggg cagccgttcg
     4981 tgctcccgat gatgttcgct cgtctcgacg atcggctcgt gctccacgcc gcttcgaaga
     5041 gtcgctttgc gacgcacctc gcgtccggtg cgcccgtgtg cgttagcgtc acgctgctcg
     5101 acggcgtcgt gttggcgcgc tcggccatgc accactcggc gaactatcgc tccgccgtcg
     5161 ctttcggctg cgccgtcgag ctcacggttg acgctgacaa gctcgcggcg ctcgcgcgtc
     5221 tgctcgagca cgtgctcccc gggcgctcgc tcgcctgccg gcctccgaac gcgctcgagc
     5281 tcaaggccac gcgcgttttc gcgctagctc tcgaagaagt ctcggtgaaa caacgcgcgg
     5341 ggggtccgct cgacgacgaa gaggatctga tgctgccata ttgggcgggc gtcgtgccgc
     5401 tcgccgtgcg cgcgggcgtt ccggtgccgg atctcgctca cgcgccgcgc gccgaagaac
     5461 ccggcgggct gcgcgcctac gagcgccgca ccgcgggcga gcccagcaac gactcggcga
     5521 cggccgtcgc ggaggcgcag ccgtgagcga cgttcggatt ccgttcgaaa ccgcgcccga
     5581 agcacgcgag gcgctgcgcg gactcgagca gtacctcacg cgggcgagct tgccgcgcga
     5641 gttgctcgag ctcgtcaagt tgcgcgtctc gctgctcaac ggctgcgcgt tttgcgtgaa
     5701 catgcactgg acgaacctgc gtgccgcagg cgaaagcgag caacggctgt actcgctcgc
     5761 ggcttggcgc gaacagagcg gctactcgcc gcgcgaacgc gccgcactcg cctgggccga
     5821 gagcctcacg cacgtggcgg aaacgagcgt tccggacgcc gatttcatcg aagtgtcggc
     5881 gcatttttcg ccgaaggaga tcgccgattt gtcgtacgcg atcgcggcca tcaacgcgtg
     5941 gaatcggcta tgcgtcgcgt tccgcattcc gcccgagccg ccgctgccgg aacgctgagc
     6001 gcagagctcc gcgcgccatg tagcgtgcgg gtccgaggag aaccatgacg aaaacgatcg
     6061 ggatctacgt gttcgacgag gtggaggtgc tcgactttgc ggggccgttc gaagtgtttt
     6121 cgaccgcggc gcgcgttgcc tcgcgcgtgt cgaatgcgcc gccgccgttc agcgtgacgc
     6181 tcgtcgccga tcgcgtgcgc gaggtgcgcg cgcgtggcgg cttacgcgtc gtgccgagcg
     6241 ccggtttcag cgaccatccc gcgttcgatg tgctgctcgt gccgggcggc gacgtgagcg
     6301 ccgagctcga acgaacccac gtgatcgcct ggatcgcgga gcttgccaag cgcgcgtctt
     6361 tgacggcatc ggtgtgcacg ggtgccttct tactcgccaa ggcgggcctg ctcggcggcc
     6421 gccgcgtcac gacgcactgg gaagatgcgg cagacttgca gcgttcgttc ccggagctca
     6481 tggtcgaaaa ggacgtacct tgggtggacg ctggtgatgt cgtcacttcc gcggggattt
     6541 ccgcgggtct cgacatgagt ctccacctcg tcgcgcggct cgcgagcagc gagcttgcgg
     6601 agcgcacggc gcgtcagatg gattacgttt ggcgacaacg ctgagcgctc gagggacacg
     6661 tcgcgtggtg tccgggcaat gagctgcccc cgcgtgagtc tgtcgctgca cgtcccgcgt
     6721 gctcggccgt cggcctgcgc gcgcgggcgc ccgccaagcg cccgcttcgc ggtcgcgggg
     6781 gcgcggcgac agcgggcggt ctcgggacgg agcgcgaaac acccggcgag ctcgcgcagg
     6841 gcgaaagagc aggtaatccg ttcgatttat gtggacagat ttccgccaac gaagtgcgcg
     6901 cgtccgttcg acgagctctg aatagcgtcg tcgcgctcgt ctgtttgatg gagcgcgcgt
     6961 ttcgcggcgc cgccgtttcg atcgcggtcc gaggccgaga aacgcgcgca gcgcggggcg
     7021 cgcgaagcca aaaaagtgcg tgatagaacg ggctgtcgac tcagaagcac aagcagggag
     7081 ggttcgacat ggcatcagca gcggtagtcg gagtcgagga cgttcacgcg gccgtctcct
     7141 ggcggcgc
//
LOCUS       DATIML010001105         4677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5145053, whole genome shotgun sequence.
ACCESSION   DATIML010001105 DATIML010000000
VERSION     DATIML010001105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4677
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5145053"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..461)
                     /locus_tag="VLJ38_18980"
     CDS             complement(<1..461)
                     /locus_tag="VLJ38_18980"
                     /inference="COORDINATES: protein motif:HMM:NF013293.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HSU41674.1"
                     /translation="MKLAIHGVTGRMGLSIVRAAQTAGHQIVGGACAPGDAAVGRDVG
                     ELAGLGSLGVVVSPDVASALLGAEVVVDFSTASAVPGLVSVAARAGVAVMSGTTGLDA
                     AGEAALDRAAASVPVLWAPNTSLGVQVLAELVEQAVRRLGQAFDVEILEVH"
     gene            complement(458..1357)
                     /gene="dapA"
                     /locus_tag="VLJ38_18985"
     CDS             complement(458..1357)
                     /gene="dapA"
                     /locus_tag="VLJ38_18985"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HSU41675.1"
                     /translation="MADLDLSGTFTALVTPLSASGSEIDFAAYEKLLALQLSGRVSGL
                     VPCGTTGEAPTLSVAEQRELIALTVRAARGKASVIVGTGSNDTKKTIEATKAAFEAGA
                     DAAMLAMPYYNKPSQEGLLRHVTLVAQAASGPLVLYNIPGRSSVNLEVETLLRILDLC
                     PNVLALKDASGGVLYCQELLARAKDRITVLSGDDPLTLPLMSVGARGVISVTSNVLPR
                     TVAEVVEAALAGHYDRAREKHAALFPLHRELFSEPSPSPIKAALVQRGVIASPEVRSP
                     LVAASPTCTRRVAEALSAFEGRA"
     gene            1477..2358
                     /locus_tag="VLJ38_18990"
     CDS             1477..2358
                     /locus_tag="VLJ38_18990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSU41676.1"
                     /translation="MGSDTLFPERLTRVSMASILPRGPDRPCLVVIAGAELGRRVELL
                     ADEVSIGRSEQSGLWINSDLVSRHHATVVSSGDGHALRDEGSTNGTFVNDRRVSGSEP
                     LSDGDQIRIGRTVIKYTRSPLEVGYLERVMELATHDALTGAFNKRRFDEAFPAEVARA
                     TQLGTALSLVLFDIDFFKRINDGFGHPAGDAVLREVTRIATACLPSGALLARVGGEEF
                     AVLLAIGIDGARYTAERLRTTIGAHKFVLNQKEIPVTISLGVAEAAAAEPPAKLYERT
                     DALLYQSKHNGRNRVSY"
     gene            2463..3068
                     /locus_tag="VLJ38_18995"
     CDS             2463..3068
                     /locus_tag="VLJ38_18995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41677.1"
                     /translation="MRASNFAYVLLLGVVSATPACTVETHLMAGPQGGAGTGGSSATS
                     GAAGKGGSAGQAGGSGGSAGSGETGGASGAAEAGDAGAGDEGGAAGSAENGAAGAAGA
                     GGSVSESCDTSSFEFPEVTCATGSMSELTNPTCQDVFLCMGLADCASSQMDCAACLDD
                     VKAAFESTNTCIQAASQATLTEACKSIAADSADEYPQCVPK"
     gene            complement(3090..4385)
                     /locus_tag="VLJ38_19000"
     CDS             complement(3090..4385)
                     /locus_tag="VLJ38_19000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HSU41678.1"
                     /translation="MAAETKQHAATARGLAVRVLERVERDGAYAAAALDAELDRHPQL
                     DPRDRGLVSELVYGVLRTRGALERRLLEHAPRGVSDRLVRLHLLVAAYQLLLLDRVPA
                     WAAVDEAIGEIRRARGGRVAGFGNAVLRKVAAGPRLELAAAVRESAPAWLTDKLDGLL
                     SADETDALLGAGVPLGRVWGRAVTGRPEPGWLAAAERHRASPLARLLPSGDPEKVEGY
                     VEGAFVVQEPGAQLIALALDVKPGERVLDACAGRGQKTTLLVEAATPSGEVWAADAHP
                     KKLAALARECERLGLAAPESAAVDWTLGTGDVPGGFDRVLVDAPCTGVGTLRRRPEIT
                     GRLVPEDPLRLAELQTAILRAAASRARPGGHIIFAVCSPLEEEAEGVLARVADELLPA
                     PFEAPALQALARPGEHSLRLTPLRHETDGYFVASLVRRA"
     gene            complement(4393..>4677)
                     /locus_tag="VLJ38_19005"
     CDS             complement(4393..>4677)
                     /locus_tag="VLJ38_19005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSU41679.1"
                     /translation="EEGRKGPDYFIWAMAVISINLGLFNLLPIPVLDGGHLMFLTLEG
                     VLRRRVPLRVREVSHLVGMAILFALMVLAFKNDIEKRWDAMLGERSGFSG"
BASE COUNT          757 a         1626 c         1634 g          660 t
ORIGIN      
        1 tgatgcactt cgaggatctc gacgtcgaag gcttggccga gccggcgtac ggcttgctcc
       61 acgagctccg cgagcacctg cacgccgagg ctcgtattcg gcgcccagag caccgggacg
      121 gacgccgcgg cgcggtcgag cgctgcctca cccgccgcgt cgaggcccgt cgtgccggac
      181 atcacggcca cgccggcacg cgccgcgacg ctcacgagcc cgggcacggc actggccgta
      241 gaaaaatcga cgacgacctc ggccccgagc agcgccgacg ccacgtccgg cgaaacgacg
      301 acaccgagcg agccgagccc ggcgagctcc cccacgtcgc gaccgacggc ggcatcgccc
      361 ggcgcgcagg ctccgcccac gatttggtgc cccgccgttt gggcggcgcg cacgatcgat
      421 agccccatgc gtcccgtgac gccgtgaatc gcaagtttca cgcgcggccc tcgaacgcgc
      481 tcagcgcctc ggcgacgcga cgcgtgcaag tcgggctcgc cgcaacgagc ggcgagcgca
      541 cctcgggcga ggcgatcacg ccgcgctgca cgagcgccgc cttgatgggc gacgggctcg
      601 gctcgctgaa gagctcgcga tggagcggaa acagcgcggc gtgcttctca cgcgcgcggt
      661 catagtggcc ggcgagcgct gcttcgacta cctcggcgac cgtgcgcggc agcacgttgc
      721 tggtcacgct gatgacaccg cgcgctccga cgctcatgag cggcagcgtg agcgggtcgt
      781 cacccgagag caccgtgatg cggtccttgg cgcgcgcgag taactcctgg cagtaaagaa
      841 cgccgccgga agcgtccttg agcgcgagga cgttcgggca cagatccagg atccgcagca
      901 gcgtctcgac ctcgagattg acgctgctgc gtccaggaat gttgtaaagg acgagcggcc
      961 cggacgcggc ctgagccacc agcgtcacgt gccggaggag cccctcctgc gacggcttat
     1021 tgtaataggg catcgccagc atcgcggcgt cggcgccggc ctcgaaggcg gccttggtcg
     1081 cttcgatggt ctttttcgtg tcgttggacc ccgttccgac gatgacgctc gccttgccgc
     1141 gcgcggcacg cacggtgaga gcgatgagct cgcgctgctc ggcgacggag agtgtggggg
     1201 cctcacccgt cgtgccacac gggacgagtc cgctcactcg gccggacaat tggagcgcga
     1261 ggagcttctc gtacgcggcg aagtcgattt cggagcccga ggcggagagc ggcgtcacga
     1321 gcgccgtgaa tgtgccgctg aggtcgaggt cggccattgg gacgagcacg tatgtccctt
     1381 tctggctcaa tacgcaaggt tgagagccct cgtgacgccg gcgaaagcgg ggtctgattg
     1441 acccacgggc ccacaggggc catgttggtg tagcccatgg ggtcggacac gctcttcccc
     1501 gagcgcctca cccgagtctc gatggcctcc atcttgccgc gggggcccga tcgcccgtgt
     1561 ctggtcgtga tcgccggcgc cgaactcggc cgccgcgtcg agctcctcgc ggacgaggtg
     1621 agcatcggcc gctcggagca gagcggcctc tggatcaaca gcgacctcgt gagccgccat
     1681 cacgcgacgg tcgtgagctc cggggacggc cacgccctgc gtgacgaggg cagcaccaac
     1741 ggcaccttcg tgaacgaccg ccgcgtgagc ggcagcgagc cgctgagcga cggcgaccag
     1801 atccgcatcg gccgcaccgt catcaagtac acgcgaagcc cgctcgaggt gggttacctc
     1861 gagcgcgtga tggagctcgc gacgcacgac gcgctcacgg gcgcgttcaa caagcgccgc
     1921 ttcgacgaag catttccggc cgaggtcgcg cgcgcgaccc agctcggcac ggcgctttcg
     1981 ctcgtgctct tcgacatcga ttttttcaaa cgcatcaacg acggcttcgg gcaccccgcg
     2041 ggcgacgccg tcctgcgcga ggtcacgcgc atcgcgaccg cgtgtctgcc cagcggtgcg
     2101 ctgctcgccc gggtcggcgg cgaagaattc gccgtgctct tggcgatcgg catcgacggc
     2161 gcgcgctaca cggccgaacg gctgcgcacc accatcggag cgcataagtt cgtgctcaat
     2221 caaaaagaga tcccggtgac gatcagcctc ggcgtcgccg aagccgccgc ggccgagccg
     2281 cctgcgaagc tctacgagcg cacggacgcg ctcctctatc aatcgaaaca caacggccga
     2341 aatcgcgtga gttactgagc gcgcgcgggt cgtgtagggc gagcgcgcct tgacactccc
     2401 tggacgagcc ctgaatactc atgcgttcgg gggccttcca cgcttaacca gcagaggtaa
     2461 cgatgcgcgc ttccaatttc gcttacgtcc ttctcctcgg cgtcgtctcc gcgacgcccg
     2521 cctgtacggt cgaaacgcac ctcatggccg gtccccaggg cggcgccggc acgggcggca
     2581 gctccgcaac gagcggagcg gccggcaaag gcgggagcgc gggtcaggcc ggcggctcag
     2641 ggggcagcgc cggctctggc gagacgggtg gcgcgtccgg tgccgcggaa gcgggtgacg
     2701 cgggtgcggg agacgagggt ggtgccgccg gttccgcgga gaacggcgcg gctggcgccg
     2761 ccggcgcggg cggcagcgtg agcgagtcgt gcgacacgag cagcttcgaa ttccccgagg
     2821 tcacttgcgc gacgggctcc atgagcgagc tcaccaatcc gacgtgccag gacgtcttct
     2881 tgtgtatggg actcgcggat tgcgcctcct cacaaatgga ttgcgcagcg tgcctcgatg
     2941 acgtgaaggc agccttcgaa agcaccaata cgtgcattca ggcggcgtcg caggcgacgt
     3001 tgaccgaagc ttgcaagtcg atcgccgcag acagcgccga tgaatacccg cagtgcgtgc
     3061 cgaagtaatg cgcggaagct aggacggggc tacgcccgcc gcacgagact cgcgacgaag
     3121 tagccgtcgg tctcgtgccg gagcggcgtg aggcgcaagc tgtgctcacc gggacgcgcg
     3181 agcgcttgca acgcgggcgc ttcgaacggc gcgggcagaa gctcgtcggc gacgcgcgcg
     3241 aggacgcctt cggcttcctc ctcgagcggg ctgcagacag cgaaaatgat gtgtccgccc
     3301 gggcgcgcgc gcgacgcggc ggcgcgtaaa atcgccgtct ggagctcggc gaggcgcagc
     3361 gggtcctcgg gcacgagccg cccggtgatt tcggggcgac gccggagcgt gcctacgccc
     3421 gtgcacgggg catcgacgag gacgcggtcg aagccgccgg gcacgtcgcc cgtgccgagc
     3481 gtccaatcga cggcggcgct ctctggcgcc gcgagaccga gccgctcgca ttcgcgcgcg
     3541 agcgcggcga gcttcttcgg gtgcgcgtcg gccgcccaca cctcgccgct cggcgtggcc
     3601 gcttcgacga gcagcgtcgt cttctggccg cggccggcgc acgcgtcgag cacgcgttcg
     3661 cccggtttta cgtcgagcgc gagcgcgatg agctgcgctc ccggctcctg cacgacgaac
     3721 gctccctcga cgtacccctc gaccttctcc ggatcgccgc tcggcaagag ccgagcgagc
     3781 ggcgacgcgc ggtgacgctc ggcggccgcg agccagccgg gctccggacg gcccgtgacg
     3841 gcgcgccccc acacgcgacc gagcggcacg cccgcgccga gcagcgcgtc ggtttcgtcg
     3901 gccgagagca aaccatcgag cttgtcggtg agccacgccg gcgcgctttc ccgcacggcc
     3961 gctgcgagct cgagccgagg accggcggcg accttgcgta agaccgcgtt gccgaagccg
     4021 gcgacgcgcc ccccgcgcgc gcggcggatt tcgccaatcg cttcgtcgac cgccgcccac
     4081 gccggaacgc gatcgagcaa gagcagctgg taggcggcga cgagcaagtg caaacgcacg
     4141 aggcgatcgc tcacgccgcg cggcgcgtgc tcgagcaggc ggcgctcgag cgctccgcgc
     4201 gtccggagca cgccgtagac gagctcggag acgagcccgc ggtcacgcgg atcgagttga
     4261 gggtgacgat cgagctcggc atcgagcgcg gcggctgcgt acgcgccgtc gcgttcgacg
     4321 cgctcgagca cccgcacggc gagcccccgc gcggtagcgg cgtgttgctt ggtttctgcg
     4381 gccatgcgcg actcagcccg aaaagcccga acgctcgccg agcatcgcgt cccagcgctt
     4441 ctcgatgtcg ttcttgaaag cgagcaccat cagcgcgaac aggatcgcca tgccgacgag
     4501 gtgtgacacc tcgcgcacgc ggagcggcac gcggcgcctg agcaccccct cgagcgtcaa
     4561 aaacatgaga tgcccgccgt cgagcacggg gatcggcaag agattgaaca gacctaagtt
     4621 gatgctgatg acggccatgg cccagatgaa ataatcgggc cctttcctgc cctcttc
//
LOCUS       DATIML010001106         8055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5145214, whole genome shotgun sequence.
ACCESSION   DATIML010001106 DATIML010000000
VERSION     DATIML010001106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8055
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5145214"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VLJ38_19010"
     CDS             <1..267
                     /locus_tag="VLJ38_19010"
                     /inference="COORDINATES: protein motif:HMM:NF020920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41680.1"
                     /translation="EEGTTTTPFDMVVLNQMDRFHLVRDVIDRLPQLGASAAYTNQAI
                     RNALLEHRQYIEQRGEDHPIVLNWRWGEKAGGARRSSSTEGDNG"
     gene            complement(325..1191)
                     /locus_tag="VLJ38_19015"
     CDS             complement(325..1191)
                     /locus_tag="VLJ38_19015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41681.1"
                     /translation="MAADPGALPMAPPAEPAAAATPADAAPLAPAPPKSPTVYGDLQN
                     AELLNTRYSAYSLPRRTWAFDIGALGIGGGDVFANLGAAYGFGGGFQIEMNLAHFGVG
                     LANVDFGWHFLDTRYFDLGARLGVGYGRGAWFWLAQGAAKNVVSKIDLVNVPIELVGS
                     SLVTRWLELDLAAHYDYVKAFGSFDDRSSLFVKAELAVSQLFLRPGARVFVTDRTALE
                     FFAKLPLYSAVPFERKTVTVPFEKTWSLEAGVRSRLAARLFGNVRLHYGRIADVLYGA
                     RLYPSFDVEFRF"
     gene            complement(1245..1931)
                     /locus_tag="VLJ38_19020"
     CDS             complement(1245..1931)
                     /locus_tag="VLJ38_19020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41682.1"
                     /translation="MPPLRVKFVHLVAVVVGVALFTGAAAAAEPASAPAAVAVEPGAT
                     TPAAGAQGSLAGLSLLATGGWGASTTSVRQLELAPYGATFGVDVGYTFRVGFHLSGYF
                     QYALGRSEKQNNDPLIGRNFEFTADTSSMSGGISLGWDVPLYALVLRYGLGFGITSMK
                     WDFGSTRPVDVRFGGYESPTVGFHFAPSLALLYEHGLFEGGVGFAYFAQANGVIPSGF
                     LANVLCGVRL"
     gene            complement(1943..2800)
                     /locus_tag="VLJ38_19025"
     CDS             complement(1943..2800)
                     /locus_tag="VLJ38_19025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41683.1"
                     /translation="MTKTLASAALFAWLAVTGGTAYAQSAPPPGPAPAPGTYSPPPPG
                     HSPPPGSPPPPGYPPPPGYPPPPGYGAPLAASPLYPAPPGAVPYGTPVHAVPSPPEGT
                     AGYVGDAMVGATWDFGIPIGSVHDFTSNVSGLGFDISLRYWLHPRFTIGAEVEWQTYR
                     DDKPRTTYPITDGAVTATAYNSVQTGSLRATADFYVLDRGPVLPFIGASVGYGWSTFQ
                     SAAADIQLYDNQDSVVVGAELGGLFALAPRAPLLLVAARYSAAPSLEFLKTVSDVQAI
                     TLQVGLLLY"
     gene            complement(2819..3457)
                     /locus_tag="VLJ38_19030"
     CDS             complement(2819..3457)
                     /locus_tag="VLJ38_19030"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HSU41684.1"
                     /translation="MNPARVGQAILVLAVGASCAAPPPDSDRDQSIVITKHAPTVDFP
                     QYRTFFLRPEIRTFADEGEGTPIDSAKAQPLLDATERNLIARGFTAAPKAEADLAVEM
                     LYTEHISTTYWCYSWYDPYYWGYPGGYYPYYGCDTAMWKSNMLSTTISDLTEARAGSA
                     GGEAGTGGQGSQGDKVPGIWFSGIYGIAITTPQAIDGIDQAFSQSPYIQTVP"
     gene            3821..4366
                     /locus_tag="VLJ38_19035"
     CDS             3821..4366
                     /locus_tag="VLJ38_19035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41685.1"
                     /translation="MPPTDETVVPPPPPPPDEPPPPPPPDEPPPRSTAGPFARGSVRL
                     SVLIGTGWTTTDEYLILGAGVGYYIADGLELGVDYEAWLFGSPVMQRLSPGVRYVFHM
                     VPVLKPYVGGFYRHTFIGDDYSDLNYLGARAGAFIAPKRGGVYFGLGAVYEHLLSCTD
                     SAYFKCDNVYPEIFIGIALGR"
     gene            4398..5984
                     /locus_tag="VLJ38_19040"
     CDS             4398..5984
                     /locus_tag="VLJ38_19040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41686.1"
                     /translation="MTYCSSNTRRTALGGGLAVLALLLSAKEAHAAGTLGPNGTPITT
                     SNYALDLYQGPLFAGARVTGLGGAYVAISEDVDGDLQNPAAPAVRPFFSYTHFDYWLG
                     FGLTFPATLQNVDFFNSGSKTHITNPPDSFVFFTPSVNLQFGELGIGLSLEAQQYGLS
                     TPSEDGETTTTLRVTIPTTHLQFAYGLDHNQWVLGVGARFVSMSVRGPERERSGFKST
                     GSGLEFGMVWKPENRPLRLGFSYRTAIRTQASFTEGLLPNSEGDVVVQNTMPGSYYLP
                     KAVAFPWDVNFGFAVQFGARPFNPPWRTNDELIERERLEFRLRQLDREQSRDHALYEA
                     SSEAERQRIRERYAREQAVDDAALDRALLAAKWRIERDLLKMNRFYVQVAASMLISGP
                     IEDAVGVESLMTQTVNRSGQKTVISPRLGVESGVIPNYLKLRAGTYIEPTRFEGSSPR
                     THLTAGLDVKLLIWNVFGLWPDDYMWRLGLGADVAHRYNTWGITIAGWYPRHQSADTV
                     PGGSDPTSKRLSGGPDVQRQ"
     gene            6078..7742
                     /locus_tag="VLJ38_19045"
     CDS             6078..7742
                     /locus_tag="VLJ38_19045"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HSU41687.1"
                     /translation="MKELLRLVTRRVMLGLLLFAMGECVSPGALAEPPAAPSAASVEA
                     PVLVYNRPIVVLRSSFLGVSAPERARHTTQRLDQVLARIGAGKISVAPTAGANAVLVD
                     GSLALFVTPGDVDAIDGETLEQTTQNAVKALERVIAETREARDRERLWRALATTGAAT
                     LALFVLCFLVLRVRSWLERRFIAFLRGSASRLSGAGSRLLYTERLLRVSHWLVQTAAA
                     CLLLLATYRWTSFVLNQFPYTRAWGEDLDDFLVGAAAQIGGSVVRALPDLLIALVIFV
                     LARGLIGLVRPLFDGIERRRTDVGWLDADTAKATRRLFSLAVWVFAGVMAYPYLPGSS
                     SAAFKGMSVLIGVMVTLGGSSLFGQAASGLILLYSRTLRLGEFVRVGEHEGTVTELGV
                     FTTRIATGRGEDVSLPNAWVLATVTKNYSRPANGRGYMFRAEVTIGYDAPWRQVEAML
                     LEAARATEGVSGDPAPRVYQTRLSDFYVEYTLVCHASFASADDRARASAALNASVIDT
                     FNRYGVQIMSPHYLGDPAQRKTIPVDGWHAAPAASDGRRQGGGSAG"
BASE COUNT         1355 a         2700 c         2702 g         1298 t
ORIGIN      
        1 gaagagggca ccaccacgac gcccttcgac atggtcgtct tgaaccagat ggatcgtttt
       61 cacttggtca gagacgtcat cgaccgcttg ccgcaactcg gcgcgagcgc cgcgtacacg
      121 aaccaggcga tccgcaacgc gctgctcgag caccggcagt acatcgagca gcgcggcgag
      181 gatcacccga tcgtgctcaa ctggcgctgg ggcgaaaagg ccggcggcgc gcgccggagc
      241 tcctccaccg agggcgacaa cggctgaaca cctcgtgcgg cgcgtccacg gcgtacgtcg
      301 gcgtggacgc ggcgtgcggc gcgctcagaa gcgaaattcg acgtcgaacg acgggtacag
      361 gcgcgcgccg tagagcacgt ccgcgatgcg gccgtagtgg aggcgcacgt tgccgaaaag
      421 gcgcgcggcg aggcgcgaac gcacgcccgc ttcgaggctc cacgtctttt cgaacggcac
      481 ggtgacggtc ttacgctcga acggcacggc gctgtagagc ggcaacttgg cgaagaattc
      541 gagcgccgtc cgatccgtga cgaacacgcg cgcacccggg cgcaggaaga gttggctcac
      601 cgcaagctct gctttgacga acagcgagct ccgatcgtcg aaggagccga aggctttgac
      661 gtagtcgtaa tgcgcggcga gatcgagctc gagccagcgc gtgacgagcg agctgcccac
      721 gagctcgatc ggcacgttga cgaggtcgat tttggacacg acgttcttgg cggcgccctg
      781 ggcgagccag aaccatgcgc cgcggccata gccgacgccg agccgcgcgc cgagatcgaa
      841 atagcgggtg tcgaggaagt gccagccgaa atcgacgttc gcgaggccga cgccgaaatg
      901 ggcgaggttc atctcgatct ggaagccgcc gccgaaaccg taggccgcgc cgaggttcgc
      961 gaacacgtcg ccgccgccga taccgagcgc gccgatgtcg aacgcccaag tgcgacgcgg
     1021 caagctgtac gccgagtagc gggtgttcag gagctccgcg ttttgcaagt caccgtaaac
     1081 ggtgggggac ttcggcggcg caggcgcgag cggtgccgcg tccgccggcg tcgccgctgc
     1141 ggctggctct gcaggcggag ccatcggcag cgcgcctggg tccgccgcca cggcatgtcc
     1201 cgcgcagaga gcaaccgacg acgcgacggc tagagcacgc cgcatcacaa cctcaccccg
     1261 cacagtacgt tggccaagaa gccgctcggg atcacgccgt tcgcctgggc gaagtaagcg
     1321 aacccgaccc cgccttcgaa gagtccgtgt tcgtagagga gcgccaggct gggcgcgaaa
     1381 tgaaagccga ccgtcggact ttcatagccc ccgaagcgca cgtcgacggg ccgcgtcgaa
     1441 ccgaagtccc acttcatgga cgtgataccg aaacccaagc cgtagcgcag cacgagcgcg
     1501 tagagcggca cgtcccagcc gagcgaaatc ccgccgctca tgctcgaggt gtcggccgta
     1561 aactcgaagt ttctcccgat cagggggtcg ttgttctgct tttcactacg accgagcgcg
     1621 tactgaaagt agccgctcaa gtggaacccg acgcgaaacg tgtaacctac gtcgacgccg
     1681 aaggtggcgc cgtagggagc gagttcgagt tgccgcacgc tcgtcgtgct cgcgccccag
     1741 ccgcccgtcg cgagcaggct gaggccggcc agcgagccct gcgcgccggc tgctggcgtc
     1801 gttgcgccgg gctccaccgc gaccgcagcc ggagccgatg cgggttcagc cgccgccgcc
     1861 gcgcccgtga agagcgcgac gccgaccacg accgcgacga ggtgcacgaa cttgacgcgc
     1921 agtggaggca ccggtcgggc tctcagtaga gcagaagtcc cacctgcagt gtgatcgcct
     1981 gcacgtcgct cacggttttc aagaactcca gcgagggcgc cgcgctgtag cgcgcggcga
     2041 ccagcagcaa cggagcgcgc ggagcgaggg cgaagagccc gccgagctcg gcgccgacca
     2101 cgactgagtc ctggttgtcg tagagctgga tgtcagccgc cgcggattga aacgtgctcc
     2161 agccgtaacc gacgctcgcg ccgatgaacg gcaagaccgg tccgcggtcg agcacgtaaa
     2221 agtccgccgt cgcgcgcagc gaacccgttt gcacgctgtt gtaggccgtg gccgtgacgg
     2281 cgccgtcggt aatcgggtac gtcgtgcgcg gtttgtcgtc ccggtacgtc tgccattcga
     2341 cttcagcccc gatcgtgaac cgcgggtgca accagtagcg gagcgagatg tcgaagccga
     2401 gtccgctcac gttgctcgta aagtcgtgca cgctgccgat cggaatgcca aaatcccaag
     2461 tcgcgccgac catggcgtca ccgacgtaac ctgcggtgcc ttcgggcgga gagggaacgg
     2521 cgtggacggg agtgccgtat ggcactgcgc ccggcggcgc cgggtaaagc ggcgatgccg
     2581 cgagcggagc gccgtagccg ggcggcggtg gatagccggg cggcggtgga tagccgggcg
     2641 gtggcggaga gccgggcggt ggtgaatggc cgggcggcgg cggagagtac gtgccgggcg
     2701 ccggagcggg cccgggtgga ggtgcggact gtgcgtacgc cgtgccgccg gtgaccgcga
     2761 gccacgcgaa cagagcagcg ctcgctaacg tcttcgtcat gctgttctcc tgagagcgct
     2821 acggaaccgt ttgaatgtag ggggattggc tgaatgcctg gtcgattccg tcgatcgcct
     2881 gcggcgtcgt gatggcgatg ccgtaaatac cggaaaacca gataccgggc accttgtcgc
     2941 cttggctccc ctgtccgccc gtgcccgcct ccccgccggc cgaacctgcg cgtgcttccg
     3001 tcagatcgct gatggtcgtc gagagcatgt tcgacttcca catcgccgtg tcgcagccgt
     3061 agtacgggta gtagcccccc gggtaacccc agtagtaggg gtcgtaccac gagtagcacc
     3121 aatacgtcgt cgagatgtgc tcggtgtaga gcatctcgac agcgagatcg gcttccgcct
     3181 tgggtgcggc cgtgaagccg cgtgcgatga gatttctctc ggtggcgtcg agcagcggct
     3241 gggccttggc cgagtcgatc ggcgtgccct cgccttcgtc ggcgaacgtg cgaatttccg
     3301 gccgcaaaaa gaaggtgcgg tattggggga aatcgacggt cggagcgtgc ttcgtgatca
     3361 cgatcgactg atcgcgatcg gagtcgggcg gcggcgccgc gcagcttgca ccaaccgcaa
     3421 gcaccaggat cgcctgccct acgcgtgccg ggttcatggc ctcccattag ccagaggccc
     3481 gcgaacccgt caatgccact tcacgcgtgt gacggccgcg acctaaaacc tgaatgcgct
     3541 tcgaacgcgc attttgcgcg ttgacgccgc gtcgtccaac gcctagtgaa gtcgcatgaa
     3601 aacgaggatt ggtgggtcgc ggactgcgcg cctgttggcc ctcggtgccg cgctctgggc
     3661 ctcgacggcc tccggggtcg caagtgcaca gccctcgccg gcgcccccgc cgacgagcgc
     3721 gcctccgccg acacggcccg agcctggcgc cggccccgac gccacaccgc cgccgctcgc
     3781 cacctcacca ctcatgggtg gcgaagcgcc tcctcccccg gtgccgccga ccgatgagac
     3841 ggtcgtgccc ccgccaccgc cgccgccaga cgaacccccg ccaccgccgc cgcccgatga
     3901 gccgccgccg cgcagcacgg ccggtccctt cgcgcgcggc agcgtccggc tgtcggtact
     3961 gatcggcacg ggttggacga caacggacga gtacctcatc ctcggcgcgg gggtcggcta
     4021 ctacatcgcc gatggcctcg agctcggcgt ggactacgaa gcttggctct tcggcagccc
     4081 cgtgatgcag cgcttgagcc ccggcgttcg ctacgtcttc cacatggtgc ccgtgctcaa
     4141 gccgtacgtg ggcggctttt accggcacac cttcatcggc gacgactaca gcgatttgaa
     4201 ttacctcggt gcacgcgcgg gcgccttcat cgcgcccaag cgcggtggcg tgtacttcgg
     4261 actcggcgcc gtctacgagc atctcttgag ctgcaccgac agcgcgtact tcaagtgtga
     4321 caacgtgtac cccgagatct tcatcggaat tgcgctcgga cgctgagccc gagtctgcct
     4381 cgcatccacg gccgttcttg acttactgtt cgtcgaacac gcggcgcacg gctctcggcg
     4441 gcgggctcgc tgtgctcgcg ctcttgctga gcgcgaagga ggcgcacgcc gccggcacgc
     4501 tgggaccgaa cggcacgcct atcacgacga gtaactacgc actcgatctc taccagggcc
     4561 ccctcttcgc cggcgcccga gtcacagggc tcggtggcgc ttacgtcgcg atttcggaag
     4621 acgtcgacgg cgatttgcag aacccggccg cgcccgccgt gcggcccttc ttctcctaca
     4681 cgcacttcga ttactggctt ggattcggcc tcacgtttcc cgcgacgctc caaaacgtcg
     4741 attttttcaa cagcggcagc aagacgcaca tcacgaatcc gccggattcg ttcgtgttct
     4801 tcacaccgtc ggtcaatctg caattcggtg agctcgggat cgggctctcg ctcgaagctc
     4861 aacagtacgg cctctcgacg ccgagcgagg acggcgagac gacgaccacc ctccgcgtca
     4921 cgatcccgac gacgcacctg cagttcgcct acgggctcga ccacaaccag tgggtgctcg
     4981 gcgtgggagc gcgtttcgtc tccatgtccg tgcgcggccc cgaacgggag cgctccggct
     5041 tcaagtcgac cggcagcggc ctagagttcg gcatggtgtg gaaacccgag aatcggccgc
     5101 tccggctcgg tttctcgtat cgcacggcca tccgcaccca ggcgagcttc acggagggtc
     5161 tgctcccgaa ctccgaaggg gacgtcgtgg tccagaacac gatgcccggc tcgtattacc
     5221 tgccgaaagc cgtcgcgttc ccctgggacg tgaacttcgg cttcgccgtg caattcgggg
     5281 cgcggccgtt caatccgccc tggcggacga atgacgagct catcgaacgc gaaaggctcg
     5341 aatttcgctt gcggcagctc gaccgcgagc agagccgcga ccacgcgctc tacgaagcga
     5401 gctcggaagc cgagcgccaa cgcattcgcg agcggtacgc ccgcgaacaa gcggtcgacg
     5461 acgccgctct cgatcgcgcg ctcctcgccg ccaagtggcg gatcgagcgc gacctgctca
     5521 agatgaatcg cttttacgtg caggtcgcgg cctcgatgct catttccggc ccgatcgaag
     5581 acgccgtggg tgtcgagagc ctgatgacgc aaaccgtgaa tcgctcgggg caaaagaccg
     5641 tgatctcgcc gcggctcggc gtggaatcgg gcgtcattcc gaactatctg aagctccgcg
     5701 ccggcaccta catcgaaccg acccgcttcg agggcagctc gccgcgcacg catttgacgg
     5761 cgggtctcga cgtcaaactc ctgatctgga atgtcttcgg gctctggccg gacgactaca
     5821 tgtggcggct cggcttgggc gccgacgtgg cgcaccgtta caacacgtgg ggcatcacga
     5881 tcgcgggctg gtatccgcgc catcagagcg ccgacaccgt ccccggtggc agcgatccca
     5941 cctcgaaacg gctgagcggt ggcccggacg tgcagcgtca gtagtggcct tccacgccag
     6001 aacgcgagca acaccacggc cgcggcgttt cgcgataaaa gtggcatgcg gatgcgccgg
     6061 tgaaggcaga ggccgtcatg aaagaactcc ttcggctcgt gaccagacgc gtcatgctcg
     6121 gactgcttct tttcgcgatg ggcgagtgtg tttcgcccgg ggcgctggcg gagccgccgg
     6181 cggcgcctag cgcggcgtcc gtcgaagccc ccgtcctcgt ttacaaccgt cccatcgtcg
     6241 tcttgcgctc gagtttcctc ggcgtgtccg cgcccgagcg cgcgcgacac acgacgcagc
     6301 gtctcgacca ggttctggcg cgcatcggcg ctggcaagat cagcgttgcg ccgacggcgg
     6361 gcgcgaacgc cgtgctcgtc gacggctcac tcgcgctctt cgtcacgccg ggcgacgtcg
     6421 acgccatcga cggcgaaacg ctcgagcaga cgacgcaaaa cgccgtgaaa gcactggaac
     6481 gcgtcatcgc cgagacgcgg gaggcgcgcg accgcgagcg gctttggcgc gcactcgcga
     6541 cgaccggtgc ggccacgctc gcgctattcg tgctgtgttt cctcgtgctc agggtgcgct
     6601 cgtggctcga gcggcgcttc atcgcgttct tgcgcggcag cgcgagtcgg ctgtcgggcg
     6661 ccggcagccg actgctctac accgaacggc tattgcgcgt gtcgcattgg ctcgtgcaga
     6721 cggcggccgc gtgtctcctc ctgcttgcga cctaccgctg gacgagcttc gtcttgaacc
     6781 aatttcccta cacgcgagcg tggggggaag acctcgacga ttttttggtg ggcgccgcgg
     6841 cgcagatcgg cggcagcgtc gtccgagcgt tgcccgatct tttgatcgcg ctcgtgatct
     6901 tcgtcctcgc gcgcgggctc atcggcctcg tgcggccgct gtttgacggg atcgagcgac
     6961 ggcgcacgga cgtgggttgg ctcgacgccg ataccgccaa agcgacgcgg cggctgtttt
     7021 ccctggcggt ttgggtattc gccggcgtga tggcctaccc gtatttgccg ggctcgagca
     7081 gcgcagcctt caagggcatg agcgtgctca tcggcgtgat ggtgacgctc ggcggttcga
     7141 gcctgttcgg tcaagccgcg agcggcctga tcttgctcta ttcgcgcacg cttcggctcg
     7201 gcgagttcgt gcgcgtgggc gagcacgagg gcaccgtcac cgagctcggt gtcttcacga
     7261 cgaggatcgc gacgggacgc ggtgaagacg tgagcctgcc gaatgcctgg gtgctcgcca
     7321 ccgtgacgaa gaactattcg cgacccgcga acggccgcgg ctacatgttc cgcgccgaag
     7381 taacgatcgg ctacgacgcc ccctggcgac aagtcgaagc gatgctgctc gaggcggcgc
     7441 gcgcgacgga gggcgtcagc ggcgaccctg cgccgcgcgt gtaccagacg cgcctctccg
     7501 acttctacgt cgagtacacg ctcgtttgcc acgcgagctt cgcgagcgcc gacgaccgcg
     7561 cgcgtgcctc ggcagcgctc aacgcgagcg tcatcgatac tttcaatcgc tacggcgtcc
     7621 agatcatgtc cccgcattac ctgggcgatc cggcgcagcg caaaacgata ccggtcgacg
     7681 gctggcacgc cgcgccggca gcctcggacg gcaggcgcca aggcggcggc tcggccggct
     7741 gaagcgcacg acaccgcggc ggaggcgagc cctccccgca agccgtcggg agcgaagccg
     7801 gacgtccgcg gtcggtcgca gcgccgtaac ggacgtccgc gaggccgtgc cgaaccgtcg
     7861 gacggagcgc aaacgcgcgc tgctaggagc ggccgaagtg gcacgtcaca tgctacgcgg
     7921 cgacgcatgt tggaacgaac cagacttact gcggtgattt tcgggctcgc cggtgtggcg
     7981 ggctgcggtg gcggctcgca cgaaagtccg ccgcgaccgg acgcgggcaa agacccgatg
     8041 atcgatccga gcgtg
//
LOCUS       DATIML010001107         1679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4562000, whole genome shotgun sequence.
ACCESSION   DATIML010001107 DATIML010000000
VERSION     DATIML010001107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4562000"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="VLJ38_19050"
     CDS             complement(<1..340)
                     /locus_tag="VLJ38_19050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41688.1"
                     /translation="MSPLRIALRALVLCASCALFFACGDANDGTEIGSETHFLSACDG
                     GCGADAECVCGVCTKRCEHDAACSALSPAAACVPLGPRVAEGRCADDAEAACDLACLA
                     DADCALLPGHF"
     gene            complement(347..1336)
                     /locus_tag="VLJ38_19055"
     CDS             complement(347..1336)
                     /locus_tag="VLJ38_19055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41689.1"
                     /translation="MTVELLIQAIVRQTTILIAQLATSGGTRAPLAHVAHQVFLELVR
                     ELERQGVSRKVSADMFGLGLRTYQRKIQRFSESSTDQGRSLWVAVLDFIQSAGSASRA
                     DIFVRFAGDDDAQVRAVLHDLCESGLITPTGSGTALSYQITSDEELARLRQLRKNDGL
                     DELLWALIYREGPLAFADLAAQKLDEAELGRALERLVETGRVEFSAEEGVYRAKHLVV
                     PLGSPVGWEAAVFDHFKALVNTVTQRLGGDRSSATLANRVGGSTYTLDVWSGHPHAEE
                     AYRTLGELRQRLGDLRRKVEEYNAAHEMPDELTEVVLYVGQCLIRQGSDDTEG"
BASE COUNT          281 a          551 c          585 g          262 t
ORIGIN      
        1 gaaagtggcc cgggagtagc gcgcaatcgg cgtccgcgag acacgctaga tcgcacgccg
       61 cttcggcgtc gtcggcgcag cgtccctcgg cgacgcgcgg accgagcggc acgcaggccg
      121 cggcggggga gagggcgctg caggcggcgt cgtgctcgca gcgcttggtg cacacgccgc
      181 agacgcactc ggcgtccgcg ccgcacccgc cgtcgcaagc cgacaaaaag tgcgtctcgc
      241 tgccgatctc ggtgccgtcg ttcgcgtcgc cgcaggcgaa gaagagcgca cagctggcgc
      301 aaaggacgag cgcacggagc gcgatgcgaa gcggtgacaa gctcgctcaa ccttccgtgt
      361 cgtcgctgcc ctggcgaatc aagcactggc ccacgtaaag cacgacctct gtcaactcgt
      421 ccggcatctc gtgcgcggca ttgtactctt caaccttccg gcgcaagtcg ccgaggcgct
      481 ggcggagctc gcccagggtc cgatacgcct cctcggcgtg tggatgaccg gaccagacgt
      541 cgagggtgta cgtgctgccg ccgacgcgat tcgccaaagt cgcgctcgag cggtcgccac
      601 cgagacgttg cgtgaccgta ttcacgagcg ctttgaagtg gtcgaacacc gcggcctccc
      661 agccgacggg cgagccgagc ggcacgacca ggtgcttcgc gcggtaaacg ccctcctcgg
      721 ctgaaaactc gacgcggccc gtctcgacga gccgctcgag cgcgcggccg agctcggctt
      781 cgtcgagctt ttgcgccgcg aggtcggcga aagcgagcgg accttcacgg tagatgagcg
      841 cccagagcag ctcgtcgaga ccgtcgtttt ttcggagttg gcgcaggcgc gcgagctcct
      901 cgtcggaggt gatctggtag cttagcgccg tgccgctgcc cgtcggcgtg atgaggccgc
      961 tctcgcacag atcgtgcagc acggcgcgga cctgcgcgtc gtcgtccccc gcgaagcgca
     1021 cgaagatgtc ggcacggctc gcgctgccgg cgctctgaat gaagtcgagc acggcgaccc
     1081 agagcgagcg cccctggtcc gtggagctct cggagaaacg ctggattttg cgctggtagg
     1141 tgcgaagccc gaggccgaac atgtccgcgc tcaccttgcg actcacgcct tggcgctcga
     1201 gctcccgcac gagctccaag aacacctggt gcgcgacgtg agcgagcggc gcgcgcgtgc
     1261 cgcccgaggt cgcgagctgg gcgatcaaga tcgtcgtctg gcggacgatg gcttgaatca
     1321 agagctcgac ggtcatgcgc gcgtgcaaac gcgttcggaa ggaccgcgcg ccgtatcatc
     1381 catgcggccg gccgagcgcg ggagtgacag aattgacgct tgtaggctag tgcataccgc
     1441 acgcgcgccc atcaatgtcg cgctcggggt cttccgtgta ggagcgagtg cgatgggggc
     1501 gcaccgactt gatcgttacg ctttgccacg gcaggctgca gctggcgcgc cgagtcgcac
     1561 aaatcactac aaaaataggg gcggaacgcg tgcccgccga ggcaacggca cgcgcttgct
     1621 gctaacgtgt cgagtcgtgt ccaggcgtag cttgagggtg ttcgaggcgg cggcccttg
//
LOCUS       DATIML010001108         2425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2541147, whole genome shotgun sequence.
ACCESSION   DATIML010001108 DATIML010000000
VERSION     DATIML010001108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2541147"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VLJ38_19060"
     CDS             complement(<1..231)
                     /locus_tag="VLJ38_19060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41690.1"
                     /translation="MRSAVAFVSLVILGSLAFTACGGDDDTFSSVGGSAGAGAKAGKG
                     GGAGKGSAGEPTAGGAGEGGANSLGGGSGKGGS"
     gene            complement(355..747)
                     /gene="rpsI"
                     /locus_tag="VLJ38_19065"
     CDS             complement(355..747)
                     /gene="rpsI"
                     /locus_tag="VLJ38_19065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HSU41691.1"
                     /translation="MAEGLTYSTGKRKTAVARVWISAGEGKVTVNGKTAEDYFERETS
                     RMIAKQSLEVLELLDKYDVRATVAGGGHSAQAEALRHGIARALTREDPERRRSLKRAG
                     FLTRDDRKVERKKYGQAGARKRFQYSKR"
     gene            complement(750..1184)
                     /gene="rplM"
                     /locus_tag="VLJ38_19070"
     CDS             complement(750..1184)
                     /gene="rplM"
                     /locus_tag="VLJ38_19070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HSU41692.1"
                     /translation="MTTPSAKPAEAAATRRWWVVDATDLPLGRLASKVAQILSGKHKP
                     SYTPHVDTGDFVVVVNASQVKVTGNKANDKNYYTHSGYPGALRKESFRHLIVKHPERP
                     IELAVKGMLPKNVLGRQMIEKLKVYGNGDHPHQAQKPEALKV"
     gene            1394..>2425
                     /locus_tag="VLJ38_19075"
     CDS             1394..>2425
                     /locus_tag="VLJ38_19075"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSU41693.1"
                     /translation="MAPPPKNRLLERLVAEKLITPEQQEATLNVIARTGDRVEEALLE
                     LRAIDEVALLKHLAASHQTRFVSTEKLAKAEIDPTTLAKVPRKLAERATVFPVLYDPQ
                     TSTLSIVMPDPSDLQSINDVQVASGVKEVRAFVGRPRAIKAAIGKAYLGDIHAFAALD
                     RDAHAQFTTMLDVFERNLVSEESLTMSLAREATTGERVLTMNDLEHAGKAQGGRGRGA
                     LDDAHLETFNVLVSLLENSRQELRGHSAQVGRLMRRISERIGVSALMLSAHVVAAYIH
                     DLGKMGAYHLTALNVAEYEGHRSSAIKQVSTPLQLLEAVRLPAEAAQAVRHMYERYDG
                     QGFPDKLSGK"
BASE COUNT          400 a          808 c          809 g          408 t
ORIGIN      
        1 cgatccgccc ttgccggaac cgccaccgag gctgttcgcg ccgccctctc ccgcgccgcc
       61 ggcagtgggt tcaccggctg aacctttacc cgcgccgccg cctttgccgg ctttggcgcc
      121 agcgccagcg ctaccgccga ccgacgagaa ggtgtcgtcg tcaccgccgc acgcggtgaa
      181 cgcaagcgac cctaggatga cgaggctgac gaacgcgacg gcggatctca tgcaagtgct
      241 ccttggcggg cgttatacgt ccgcagcgga gaacgtcgca atctccgcga gccgagccca
      301 aactttgtgc cgaagcgagc gcgccaagac ggcgcgccga cacggcgcag aaactcagcg
      361 cttcgagtac tggaagcgct tgcgggcgcc tgcctgaccg tacttcttac gctcgacctt
      421 gcggtcgtcg cgcgtgagga agccggcgcg cttgagcgaa cgacgccgct cgggatcttc
      481 gcgcgtgaga gcgcgcgcga taccgtggcg cagcgcctcg gcctgggcgg agtggccgcc
      541 gccggcgacc gtcgcgcgca cgtcgtactt gtcgagcagc tcgagcacct cgagcgactg
      601 cttcgcgatc atccgcgacg tttcgcgctc gaagtagtct tcggccgtct tgccgttgac
      661 cgtgaccttg ccttcgcccg ccgaaatcca gacgcgggct acagccgttt tccgtttgcc
      721 cgtcgaataa gtgagtcctt cagccattct caaaccttca gagcctcagg cttttgcgcc
      781 tggtgtgggt ggtcaccgtt gccgtagacc ttgagcttct cgatcatctg ccggccgagc
      841 acgttcttcg gcagcatgcc cttcacggcg agctcgatcg gacgctcggg gtgcttcacg
      901 atcaggtgac ggaagctctc cttgcggagc gcgcccgggt agccgctgtg agtgtagtag
      961 ttcttgtcgt tcgccttgtt gccggtgact ttcacctggc tcgcgttgac gacgacgacg
     1021 aagtcgcccg tgtcgacgtg cggcgtgtac gacggcttgt gcttgcccga aaggatttgg
     1081 gcgactttgg acgcgaggcg tccgagcggt agatccgtgg cgtccaccac ccaccatcga
     1141 cgggtggcgg ctgcttcggc tggtttcgcg gagggggtgg tcatcttcgg aggcgcttta
     1201 gggggcggga aagggggcga acccttagcg tccggcggcc ggcacgtcaa gaacggccgg
     1261 cgttctggcg cgaaactcgc gcttctgccg caaatagtgg ggggtgcggg aactcgcgcg
     1321 ggtgcctgga gccgcgaacc gaaacggccg ggggccgtag ggtcgcgctg agctaaaata
     1381 gttggctatc cccatggcgc cgccgccgaa gaaccgattg ctcgagcgct tggtggccga
     1441 gaagctcatc acgcccgagc aacaagaggc gacgctcaac gtcatcgcgc gcacgggcga
     1501 tcgggtcgaa gaagcgttgc tcgagctccg cgccatcgac gaggtcgcgc tcttgaagca
     1561 cctggcggcg tcgcatcaga cgcgcttcgt gtccacggag aagctcgcca aggccgagat
     1621 cgatccgacg acgctcgcga aggtgccgcg caaactcgcc gagcgcgcca cggtgttccc
     1681 ggtgctgtac gacccgcaga cctcgacgct cagcatcgtg atgccggacc cgagcgacct
     1741 gcagtcgatc aacgacgtgc aggtcgcctc gggcgtgaag gaggtgcgcg ccttcgtggg
     1801 gcggccccgc gcgatcaaag cagcgatcgg caaagcgtac ctcggcgaca ttcatgcgtt
     1861 cgcggcgctc gaccgcgacg cgcacgcgca gttcacgacg atgctcgacg tgttcgagcg
     1921 caacctcgtg agcgaagaaa gcctcaccat gtcgctcgcg cgcgaggcga ccacgggcga
     1981 gcgcgtgctc acgatgaacg atctcgagca cgcggggaaa gcgcagggcg ggcgcgggcg
     2041 cggcgcgctc gacgacgcgc acctcgagac gttcaacgta ctcgtgtcct tgctcgagaa
     2101 ttcgcgccag gaattgcgcg gccattcggc gcaggtcggg cggctcatgc gccgtatctc
     2161 cgagcgcatc ggcgtctcgg cgctcatgct ctcggcgcac gtcgtcgccg cctacatcca
     2221 cgatctcggc aagatgggcg cctaccacct gacggcgctc aacgtcgccg agtacgaggg
     2281 ccaccggagc tcggcgatca agcaagtctc gacgccgctg caattactcg aggccgtgcg
     2341 cctcccggcc gaagcggccc aagccgttcg gcacatgtac gagcgctacg acgggcaggg
     2401 cttccccgac aaactctccg gcaag
//
LOCUS       DATIML010001109         3578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_811240, whole genome shotgun sequence.
ACCESSION   DATIML010001109 DATIML010000000
VERSION     DATIML010001109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3578
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_811240"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VLJ38_19080"
     CDS             complement(<1..874)
                     /locus_tag="VLJ38_19080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSU41694.1"
                     /translation="MATSVDFEHRFNALVECSPDAIFITDFDSAQFVDVNVKACELFG
                     YTRAELCGMTGRQLHPPEDTGVVDAISRDLIEHGQVRWSPVRLQKRNGSTFFGELRST
                     VYRIDGKKLYVTLVRDLSERLSREGDLQAAYRALSEIEGHLVRSSRLAAIGEIAAGIA
                     HEVNNPAASTLTNLELLQRDIAELVRAVHEPGQSVSSLVAALEAFCREASESVRDSFE
                     GIQRIASIVKGLRGFTRIDGDDVEVVDVNEVVKTAHNLVRPQIRHIAHVELELAARAP
                     LPASRGRLIQVVVNL"
     gene            complement(1136..>3578)
                     /locus_tag="VLJ38_19085"
     CDS             complement(1136..>3578)
                     /locus_tag="VLJ38_19085"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41695.1"
                     /translation="SVPPSAVSSPKPSSAPRRTVSVAPPNELWSGKIRVLGEVGSGAM
                     AEVLRGYDTKLRREVALKVTKHSRREMPRPLLARFAEEAQIMAQLEHPNVVPVHDLGT
                     SPDGRGYFSMKLIPGRSLETILEQRRAGDRATLAQFGLRRLLDVFLQVCQAIDYAHAR
                     GVIHRDLKPANIMVGDFGEVLVMDWGVAKLMEPSASRAEAVTTSAEEGSIPDLETGDS
                     LFPAARPGVTSVRAAAKAWQTQDGTVIGTPEYMSPEQAAGRPVDGRADIYALGVILYE
                     ILCGQVPFEHDDPQVTLKRVLADVPTAPSKIQSSTPAALEALTLRLLVKDPAERTLSI
                     PQIRAYVQSYIEGVARQYERDSLFGTIVTGGGALVLFAFVVWYLTGQSIAKVLTLGPP
                     AVVNAVGWFLLVLALGYPLWAQPKFFRLGRKATDPFRPPSSEELFSSGFLAYRTFAAA
                     LAPLFQLVFIVELVALAIVHAGESRLGSAELVRHVAIQLRAEWSEALIVILVFQFAYL
                     FLLTTEVRFARRIDRYELIAVRPRWESVWPFFLIIVLLSTVITLDVLDWTLGRPHFDL
                     STWLRAELAAKSLDLIEIAKTLVFQGTFLLALSAATLLAAFSFSEILAALRAPSEPAD
                     EASVTTRGQYFLRSLATFRAARAIWLYGGAMIGSLTGIRMLSQTTELPLLARILYILG
                     PSLIGFVGYSMLRSRTHRYLAAEPALKRMVTARVRQARDAQRLANLSALEKVSWSTRW
                     AQLAAPVLGLAGYLAWNWSNLRDGSMHELPLPLTTKDWLLILPYVLLFPVLLSRDALQ
                     LRRLRRVTSARTPAA"
BASE COUNT          627 a         1150 c         1260 g          541 t
ORIGIN      
        1 gcaggttcac gaccacctgg atgagccgcc cccggctcgc ggggagcggc gccctcgccg
       61 cgagctcgag ctcgacgtga gcgatgtgcc ggatctgggg ccgcacgagg ttgtgggcgg
      121 tcttgacgac ctcgttcacg tcgacgacct cgacgtcgtc gccgtcgatg cgcgtgaagc
      181 cgcgcaggcc cttgacgatg gaggcgatgc gctggatccc ttcgaacgag tcgcgcacgc
      241 tctcgctcgc ttcgcggcag aacgcctcga gcgccgccac gagcgaggac accgattgtc
      301 cgggctcgtg caccgctcgg acgagctcgg cgatgtcgcg ctgcaggagc tccaaattgg
      361 tgagcgtact cgcggcagga ttgttcactt cgtgcgcgat cccggcggcg atttcgccga
      421 tggccgcgag ccgcgacgaa cggaccaggt gcccctcgat ttccgagagc gcgcgatatg
      481 ccgcctggag atcgccttca cgcgagaggc gctcggagag gtcgcgcacg agcgtcacgt
      541 aaagcttctt gccgtcgatg cggtaaaccg tgctgcgaag ctcgccgaag aaggtcgagc
      601 cgttccgctt ctgcaagcgc acgggggacc agcgcacctg cccgtgctcg atcaagtcgc
      661 ggctgatggc gtcgacgacg cccgtgtcct ccggcgggtg cagctgacgg ccggtcatgc
      721 cgcaaagctc ggcgcgcgtg tagccgaaga gctcgcacgc cttcacgttc acgtcgacga
      781 actgcgccga atcgaagtcc gtgatgaaga tcgcgtccgg cgagcattcc actagcgcgt
      841 tgaaacgatg ctcgaaatca accgaggtcg ccaaagatca gtcgctccga tgggacgcca
      901 cgatcgggga ctgcgtcagc gccgtcgccc ccggcgcgct gagtatacgg cccggcgccc
      961 cgccgtccga gttcgcactg ttgaggcccg gccggggctc acagcccccg cttttgtact
     1021 gattttttgg accgtcttac ttaacgacgg tctggcagcc gagctggctc gggccaggag
     1081 cagaggtttg cttgttgccg ctctgggcga acgcgacgcg ggggcgatcg tccggtcacg
     1141 ccgccggcgt tcgcgcggac gtcacgcggc gcaggcgtcg caattgcaag gcgtcgcgcg
     1201 acaggagcac ggggaacaag aggacgtacg gcaggatcag cagccaatct ttggtcgtga
     1261 gcggcagcgg gagctcgtgc atcgagccgt cgcgcagatt gctccagttc caggcgagat
     1321 agcccgccag gccgagcacc ggagccgcga gctgagccca gcgcgtgctc cacgagactt
     1381 tctcgagggc gctcaaattg gccaatcgct gcgcgtcgcg ggcttggcgc acgcgggccg
     1441 tgaccatgcg tttcagcgct ggctccgcgg cgaggtagcg gtgggtgcgg ctgcgcagca
     1501 tggaataacc gacgaagccg atgagcgacg ggccgaggat gtagaggatg cgagcgagca
     1561 gggggagctc ggtcgtctgc gacagcatgc gaatgccggt gaggctgccg atcatggcgc
     1621 cgccgtagag ccagatcgcg cgggcggcgc gaaaggtcgc gagcgagcgc aagaagtact
     1681 gcccacgggt cgtcaccgag gcttcgtcgg cgggctcgct cggcgcacgc agggcagcga
     1741 ggatctccga gaacgagaaa gccgcgagca gcgtggcggc ggagagcgcg agcaagaacg
     1801 tgccctgaaa gacgagcgtc ttcgcgatct cgatcaaatc gagggatttt gcggcgagct
     1861 ctgccctgag ccacgtcgaa agatcgaaat ggggtctgcc gagcgtccaa tcgagcacgt
     1921 ccagcgtgat cacggtcgag agcagcacga tgatcaaaaa gaagggccac accgattccc
     1981 agcgcggccg cacggcgatg agctcgtagc gatcgatgcg gcgcgcgaag cgcacttcgg
     2041 tcgtcaagag gaacagatac gcaaactgga agaccaggat cacgatcagc gcttccgacc
     2101 actcggcgcg cagctggatc gcgacgtggc gcacgagctc cgccgagccg agcctgctct
     2161 cgcccgcgtg gacgatcgcg agcgcgacga gctcgacgat gaacaccagc tgaaacagcg
     2221 gcgccagcgc ggcggcgaac gtacggtagg ccaaaaatcc cgagctgaag agctcctcgc
     2281 tcgagggcgg gcggaacgga tcggtcgctt tccggccgag gcgaaagaat ttcggctgcg
     2341 cccagagcgg gtaaccaagc gcgagcacga gcagaaacca gcccacggcg ttgacgaccg
     2401 cgggcggtcc gagcgtgagc accttcgcga tcgattgccc ggtgaggtac cagacgacga
     2461 aggcgaagag gacgagggcg ccgccgcccg tcacgatcgt gccgaacaag gagtcgcgct
     2521 cgtattggcg cgccacgccc tcgatgtagc tctgaacgta agcgcggatt tgcgggatgc
     2581 tcagcgtgcg ctcggcgggg tctttgacga gcaagcgcag cgtcaaggct tcgagcgccg
     2641 ccggtgtcga cgactggatc ttgctcggtg ccgtcggaac gtcagcgagc acgcgcttga
     2701 gcgtcacctg cggatcgtcg tgctcgaacg gcacctggcc gcacaggatt tcatagagaa
     2761 tcacgccgag cgcgtagatg tcggcgcggc cgtcgaccgg gcggcccgcc gcctgctcgg
     2821 gcgacatgta ctcgggcgtg ccgatcaccg tgccgtcttg cgtctgccag gccttggcgg
     2881 cggcgcgcac ggaggtgacg ccgggccgcg cggcgggaaa gagactgtcg ccggtttcga
     2941 ggtcgggaat gctgccttct tcggcgctgg tcgtgaccgc ctcggcgcgg ctggcggacg
     3001 gctccatcag cttggcgacg ccccagtcca tgaccagcac ttcgccgaag tcaccgacca
     3061 tgatgttggc gggcttcaga tcgcgatgga tcacgccgcg cgcgtgggcg tagtcaatcg
     3121 cctggcacac ctgcaggaac acgtcgagca aacgacgcag gccgaactgc gcgagcgtcg
     3181 cccgatcgcc cgcccggcgc tgttcgagga tcgtctcgag cgagcgtccg gggatgagct
     3241 tcatcgagaa gtagccccgc ccgtcgggcg aggtgccgag gtcgtgcacc ggcacgacgt
     3301 tcggatgctc gagctgcgcc atgatctgcg cttcctcggc gaagcgagcg agcagcgggc
     3361 gcggcatctc tcgccgcgaa tgcttggtga ccttgagcgc tacctcgcgc cggagcttgg
     3421 tgtcgtagcc acgcagcacc tcggccatcg cgccgctgcc gacctcgccg agcacgcgga
     3481 tcttccccga ccagagctcg ttcggcggcg cgacggagac tgttcggcgc ggcgccgagc
     3541 tcggcttggg cgagctgacc gcgctcggcg gcaccgac
//
LOCUS       DATIML010001110         1779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3980786, whole genome shotgun sequence.
ACCESSION   DATIML010001110 DATIML010000000
VERSION     DATIML010001110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3980786"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VLJ38_19090"
     CDS             <1..469
                     /locus_tag="VLJ38_19090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41696.1"
                     /translation="MDFAVRAPAGTFADKNRNYQFDKDSEKQVTFNLAVAVNEAEKKD
                     AAKDQKPDDKNKKKSAPDEMRAFVLADSDALGDFVMAQDPYNQLLFIDAVRWLVGEES
                     FAGPPNTEEDQRIQHTKQQDLSWFYATIFGAPGLVLALGLTLSRRSRAKGARR"
     gene            466..1488
                     /locus_tag="VLJ38_19095"
     CDS             466..1488
                     /locus_tag="VLJ38_19095"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HSU41697.1"
                     /translation="MKGLLPHLVALLVAAVLAFGVWSHGDKPIELDAAEKVEVWSGSP
                     EHLERIRFESPKRTVTLEARKDSIGRYYVATLDKEEPAKPHPAAPDAGTDAGAEPSEP
                     AKRVTTHFIAVKDADELATKLAPLTALRQVGTLAGGRAEEFGLDKPEGTLKVKIGGVE
                     HALVIGSATPGGQERYAKEEKSGVVYAVAGDLVQSMLGAESRLLERELHAFPETDVTR
                     LRISRGGKTREVVSIPDKKGAWADAASPSKLDETVGNWLTKVSRLHVTDYVENTPSPL
                     TPESAIVRLDYFGGAKTLGFLELYKLPAEKGSDYYVRTENSRWFVKVLASAGEQVEQD
                     AASVVK"
     gene            complement(1525..>1779)
                     /locus_tag="VLJ38_19100"
     CDS             complement(1525..>1779)
                     /locus_tag="VLJ38_19100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41698.1"
                     /translation="AATVFACSKQEPPAPAATTEPSATAPAVSAAPAAPSATTPAPSA
                     SAATAEPPTEEDFENEAADQVTAKTLDAQLDALEKEIKAD"
BASE COUNT          320 a          567 c          623 g          269 t
ORIGIN      
        1 catggatttc gccgtgcgcg cgcccgcggg caccttcgcc gacaagaatc gcaactacca
       61 gttcgacaag gacagcgaga agcaagtcac cttcaacctg gccgtcgcgg tgaacgaagc
      121 ggagaagaag gacgctgcca aggaccaaaa gccggacgac aagaacaaga agaagagcgc
      181 ccccgacgag atgcgggcgt tcgtgctcgc ggactcggac gcactcggcg acttcgtgat
      241 ggcgcaggat ccgtacaacc aactgctctt catcgacgcg gtgcgctggc tggtcggtga
      301 agagagcttt gccggtccgc cgaacacgga agaggatcag cgcatccagc acaccaaaca
      361 gcaggatttg agctggtttt atgccacgat cttcggcgcg ccgggcctcg tgctcgcgct
      421 cgggctcacg ttgagccgcc gttcgcgcgc caagggagcc cggcgatgaa gggacttttg
      481 ccgcacttgg tcgcgttgct cgtcgccgcc gtgctcgcgt tcggggtttg gtcgcacggc
      541 gacaagccca tcgagctcga cgccgccgaa aaggtcgagg tttggagcgg gagccccgag
      601 cacctcgagc gcatccgctt cgaatcgccc aagcgcacgg tcacgctcga ggcgcgcaag
      661 gattcgatcg gtcgctatta cgtggcgacc ctcgacaagg aggagcccgc gaagccgcac
      721 cccgctgcac ccgacgcggg taccgacgcg ggcgcggagc cgagcgaacc ggccaagcgc
      781 gtgacgacgc atttcatcgc cgtgaaggac gccgacgagc tcgcgaccaa acttgcgcct
      841 ctcacggcgc tgcggcaggt ggggacgctc gccggcggcc gtgccgagga gttcggcctc
      901 gacaagcctg aagggacgct gaaggtcaaa atcgggggcg tcgagcacgc gctcgtgatt
      961 ggcagcgcaa cgccaggcgg tcaggagcgc tacgccaagg aggagaagag cggcgtcgtt
     1021 tacgccgtcg cgggggatct cgtacagagc atgctcggcg ccgaatcgcg gctcctcgag
     1081 cgcgagctgc acgcatttcc cgaaacggac gtgacgcgcc tgcgcatcag ccgcggcggc
     1141 aagacgcgcg aggtcgtgag catccccgac aagaagggcg cttgggcgga cgccgcgtcg
     1201 ccgagcaagc tcgacgaaac cgtgggcaat tggctcacca aggtgtcgcg cctgcacgtg
     1261 accgattacg tcgagaacac gccgtcgccg ctcacgcccg aaagcgcgat cgttcgcctc
     1321 gactatttcg gcggtgcgaa gacgctcggg ttcctcgagc tttacaagct gcccgccgag
     1381 aaaggcagcg actactacgt gcggacggag aacagccgct ggttcgtcaa agtgctcgcc
     1441 tccgccggcg agcaggtcga gcaggacgcc gcgagcgtcg tgaagtaacc ggccgaagcc
     1501 cgcggcgccg tgacggagct cagctcagtc cgctttgatt tctttttcga gcgcgtcgag
     1561 ctgggcgtcg agcgtcttcg cggtgacctg gtcggccgcc tcgttctcga agtcctcttc
     1621 ggtgggtggc tcggcagtgg cagccgaggc gctcggggcc ggcgtcgtgg cgctgggggc
     1681 cgcgggtgcc gcactcacgg ccggtgcggt ggcgctcggt tcggtcgtgg cggcgggcgc
     1741 tggcggctct tgtttcgagc aggcgaagac ggtggcagc
//
LOCUS       DATIML010001111         3503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4562566, whole genome shotgun sequence.
ACCESSION   DATIML010001111 DATIML010000000
VERSION     DATIML010001111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3503
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4562566"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..796
                     /locus_tag="VLJ38_19105"
     CDS             <1..796
                     /locus_tag="VLJ38_19105"
                     /inference="COORDINATES: protein motif:HMM:NF018652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HSU41699.1"
                     /translation="LERERLGFLGRLHVAEGALGALRTALRAGFRRVSADLIFGVAGE
                     SPEVARREALTIAELGPTHLSAYALTIEPGTRFGALAKANKLPLLEEDLVARSFETVA
                     TALEGAGFEHYEISNFARGGHYAEHNLAIWRGGTYLGLGTGAWGTVRRSGGLLRYRNA
                     PAPERYLAATATAPLWEISELVSDAEHVDAATALSERLMLGLRLAEGVELERAAAETG
                     ATGWTRERERAVERLVRNGRLVREGERLRIPKSAWLFADAVVRELM"
     gene            complement(918..1466)
                     /locus_tag="VLJ38_19110"
     CDS             complement(918..1466)
                     /locus_tag="VLJ38_19110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41700.1"
                     /translation="MLDAAPVTGQASQVEELSPGVARVELKGDLPLGWCGNLAGALSR
                     RGVSILRGNADREGTGWHVVLEVLAEDGANARELDFAALAAEASPEPNGSLRLESFVL
                     TLPRRGAPVELTVRGTDRRGFLAALLERLAALGLFPSRISVETVHGMASDTLWLQGTG
                     GQPPVERSIDALREFLRSVTGN"
     gene            1577..>3503
                     /locus_tag="VLJ38_19115"
     CDS             1577..>3503
                     /locus_tag="VLJ38_19115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU41701.1"
                     /translation="MSSASLRVIALGNLAGELKSSLEAAVRTVGLELLLTREPARAFV
                     ELERDGALAVLVDMATLGAEQFCKRARGTERLRSVPVIGMSRHPNELGFARVFAWGAD
                     DLVPLGARLPLERRLHVLRDTPASAKTGFGQAVVAEATTQRRALVGRVLAHAGYDVKF
                     AVDRGAVELYASQSETRLVVISAALGDPRRIIEAAARAGALPTWIVTVEARSTQRLAA
                     SLAGLERVAVTSTAGAPEDVLFLANELVFSKGQKRREWRALYATPVAFRAQGGDSDEY
                     GFSYDASPSGLYVRSLLPCATEQVEVELRLPNRDERVRLHGKVARRFAFGSGAIASAP
                     PGFSVKFDGPEAALTRWTESCTALINAASTTESMAPPPRPRSTSQTVLASPELGGKEV
                     PLAVPPATVSIESVVAPLPVAVEAAVGAGSDVGELLAATLDEQTLTQVGTLPVTIDPD
                     TLGVREERPSEFGVSPAALADSPPASLPAPLEPTISLPPVPVPARSVPRPEAPAAPGA
                     TAAGDEAKAPAPPSSSEAKTLGGTVILKRADDDPSTPRAMDWEADAKTTVRASQPSLE
                     PLAPPTPPTPPAEAVREPTSPELEHEHEHEEAAPPASRRLGENDSAFAPTEPPPAMPE
                     PEAERALVPATDPRNAAP"
BASE COUNT          521 a         1220 c         1285 g          477 t
ORIGIN      
        1 gctcgaacgc gagcggctcg ggtttctcgg gcggctgcac gttgccgagg gagcgctcgg
       61 cgcgttgcgc acggcgctgc gcgcgggttt tcggcgcgtc tcggcggatt tgatttttgg
      121 ggtggccggg gagtcaccgg aagtggcgcg gcgcgaggcg ctgaccatcg ccgagctcgg
      181 accgacgcac ctgtcggcgt acgcgctcac gatcgagccg ggcacccgct tcggcgcgct
      241 cgccaaagcg aacaagctgc cgctgctcga agaggacctc gtcgcgcgtt cgttcgagac
      301 cgtggcgacg gcgctcgaag gtgcgggctt cgagcattac gaaatcagta actttgcgcg
      361 gggcggacac tacgcggagc acaacctcgc gatttggcgc ggcggcacgt acctcgggct
      421 cgggacgggc gcttggggaa cggtgcggcg cagcggcggg ctcttgcgct atcgcaatgc
      481 gccggcgccg gagcgctacc tcgcggcaac ggcaacggcg ccgctctggg aaatttccga
      541 gctcgtgagc gacgccgagc acgtcgatgc cgcgaccgcg ctcagcgaac ggctgatgct
      601 cggcttgcgt ctcgccgaag gcgtcgagct cgagcgcgcc gcagcggaaa cgggcgccac
      661 cggctggacg cgcgagcggg aacgcgcggt ggaacggctc gttcgaaacg ggcggctcgt
      721 gcgcgaaggc gaacggttac gcatcccgaa gagcgcctgg ctgttcgcgg acgcggtcgt
      781 gcgcgagctc atgtgacggc gtgggggccg cggagcgaca cggggccgta cggcggagcc
      841 gagggtgcgc cggcgggcgc gggtcatcgg cgcgaccacg acgtgtggct gcgaaaaccc
      901 aaagccgggc ggagcggcta gttgcccgtg acgctgcgca gaaattcgcg cagggcgtcg
      961 atgctgcgct cgacgggagg ctgcccgccc gtgccttgga gccacagcgt gtccgaagcc
     1021 atgccgtgca cggtttcgac actgatgcgc gacgggaaga gaccgagcgc ggccaagcgt
     1081 tcgagcagcg cggcgaggaa accgcggcga tcggtgccgc gcacggtgag ctctaccggg
     1141 gccccacgcc gcggcagcgt gagcacgaaa ctttcgagcc ggagcgagcc gttgggctcg
     1201 gggctcgctt ccgccgcgag cgccgcgaag tcgagctcac gggcgttcgc cccgtcctcg
     1261 gccaggacct cgagcacgac gtgccagccg gtgccttccc ggtcggcatt gccgcgcaga
     1321 atagataccc cccgccgcga tagcgctccc gccaggttgc cgcaccaacc gagcggaagg
     1381 tcgcccttga gctccacgcg ggcaaccccc ggcgaaagtt cctccacttg ggaggcttgc
     1441 cctgtcaccg gcgccgcgtc gagcatgccg ggatagaaac gcgcagcatg cttctagggt
     1501 gtttcctgca gtttgcgggc gtttttgccg ggtcaagttg ctcccacctt cgcgcacccc
     1561 gtaaagtccc gccgaggtgt ccagcgcatc cctgagggtc atcgccctcg gcaacctagc
     1621 cggcgagctc aagtcctcac tcgaggccgc cgtccgaacc gtcgggctcg agctcttgct
     1681 cacacgcgag ccggcgcgag ccttcgtcga gctcgagcgc gacggtgcgc tcgccgtgct
     1741 cgtcgatatg gcgacgctcg gtgccgaaca attttgtaaa cgcgcccgcg gcacggagcg
     1801 gctgcgcagc gtgccggtca tcgggatgtc gcggcatccg aacgagctcg gcttcgcgcg
     1861 cgtgttcgct tggggcgccg atgatctggt gccgctcggc gcgcggctgc cgctcgagcg
     1921 ccgcttgcac gtgttgcgcg acacgccggc gtccgcgaag actggtttcg gccaggccgt
     1981 cgtcgcggaa gccacgacgc aacggcgcgc gctcgtcggg cgcgtgctcg cccatgccgg
     2041 ctacgacgtg aagttcgccg tcgaccgcgg cgccgtcgag ctttacgcct cgcagagcga
     2101 gacgcgactc gtggtgatca gcgcggcgct cggtgatccg cgccgcatca tcgaggcggc
     2161 cgcgcgcgcc ggggcgctgc cgacctggat cgtgacggtg gaggcgcgca gcacgcagcg
     2221 gctcgcggct tcgctcgccg ggctcgagcg cgtcgccgtg acgagcacgg cgggcgcgcc
     2281 cgaggacgtg ctgtttctcg cgaacgagct cgtgttctcg aaggggcaaa agcgccgcga
     2341 atggcgcgcg ctctacgcga cgcccgttgc cttccgcgcg cagggcggcg acagcgacga
     2401 gtacggcttc agctacgacg cgagcccgag cggactctac gtgcgcagtc tcctgccgtg
     2461 cgcgaccgag caggtcgagg tcgagctgcg tttacccaat cgcgacgaac gggtgcgttt
     2521 gcacggcaaa gtggcgcgcc gcttcgcgtt cggctcgggc gccatcgcga gcgcgccgcc
     2581 gggcttcagc gtgaaattcg acgggccgga ggcggcgctc acgcgctgga ccgagtcgtg
     2641 cacggcgctg atcaacgcgg cgagcacgac ggaatcgatg gcgcccccgc cgcgcccgcg
     2701 cagcacgagc caaacggtgc tcgcgagccc cgagctcggg ggcaaagagg tgccgctcgc
     2761 cgttccaccc gcgacggtga gcatcgagtc ggtcgtcgca ccgctgccgg tcgccgtcga
     2821 agcggccgtg ggcgcgggca gcgacgtggg cgagctgctc gcggcgacgc tcgacgagca
     2881 gacgctgacg caggtcggga cgctgcccgt gacgatcgat ccggacacgc tcggcgtaag
     2941 ggaagagcga ccgagtgagt tcggcgtgag tccggcggcg ctcgcggatt cgccgccggc
     3001 gtctttgccg gcgccgctcg agcccacgat cagcctgccg cccgttccgg tgcccgcgcg
     3061 gagcgtcccg cgtccggagg ctcccgccgc gcccggcgcg acggcagcgg gcgacgaggc
     3121 gaaggcgcct gctccgccga gctcgagcga ggcaaagaca ctgggcggca ccgtgatcct
     3181 gaagcgtgcg gacgacgacc cgtcgacgcc gcgcgcgatg gattgggaag cggatgccaa
     3241 gacgaccgtc agagcttcgc agccgagcct cgaaccgctc gcgccaccaa cgccgccgac
     3301 tccgcccgcc gaagccgtgc gcgagccgac ctcgccggag ctcgagcacg agcacgagca
     3361 cgaggaagcg gcccccccgg cgagtcgacg acttggcgag aacgacagcg ctttcgcgcc
     3421 caccgagccg ccgcccgcca tgccggagcc agaagccgag cgagcgctcg tgcccgccac
     3481 cgacccccgg aacgcagccc ctg
//
LOCUS       DATIML010001112         1630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4856478, whole genome shotgun sequence.
ACCESSION   DATIML010001112 DATIML010000000
VERSION     DATIML010001112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4856478"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(328..>1630)
                     /locus_tag="VLJ38_19120"
     CDS             complement(328..>1630)
                     /locus_tag="VLJ38_19120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41702.1"
                     /translation="LRWPLYALPVATVAVIALALVTGGAARPTRVARIWGGPTTGDRV
                     SFRAEVFDLIEERAAVHEAPVSRGQIRVELHAPAFDAARTLPLDDEGGAEMAFEPPEG
                     ARPLELRLTQAGSELARGRIELAAAPWAGAARRRGGWATTHAGEFEIRVAPARGALAV
                     PFEEELFVAVSRDGAPAQNVTVSASGTGARITPRERLTDANGRCSFQIAPEEHAVNVT
                     FGVNDSLQASFALPVVPGAMRARKDGNELVIESPVPRDLAYFAVVTPSERWFGGRVTL
                     TPAANGRSSARVPLPVLGTGPHYAVVSSELDLRSSAAVGWPLEPAADGEPARTFDAVE
                     ALLLDGRPRALHREGRRRTRVRWVLGAFSAAALAVELLLLVAFTRRSDRELDAHLAGA
                     GVNLEDASRLAPKRSPAVAVALIAVALGFLVVALIGVLRVE"
BASE COUNT          261 a          586 c          562 g          221 t
ORIGIN      
        1 agttcaagac gtgttccggg actcccgggc gacggaaagt gaacgtccgc gtctcgttga
       61 cgccaaacgc acctttgagt tttggttttg ggcgaccgct gaagctcaaa gtcgaaggcg
      121 aagcctcgct gcgttccact cgaatctcga gtcggcggag aaccaacgaa ccagcgaacc
      181 agcgaaccaa cgaaccaacg aaccaaccga agggcccctc gcggattgcc ggcgcgttgc
      241 cgccgcgccg tcggcgcagc acgcggccat ccttcgttct aaggagttga ccttgtccgt
      301 gcccatgtcc ggatcgccac gtcgccgtca ctccacgcgg agcacgccaa tcaacgccac
      361 cacgaggaac ccgagcgcca cggcgatgag cgccaccgcg acggccggtg agcgcttcgg
      421 ggcgaggcga ctggcgtctt cgaggttcac gccagctccc gcgaggtgcg cgtcgagctc
      481 gcggtcgctc cggcgcgtga acgccacgag cagcaggagt tccacggcga gcgccgcagc
      541 cgagaaggcg ccgagcaccc agcgcacgcg cgtacggcgc cggccttcgc ggtgcagggc
      601 gcgcggacga ccgtcgagga ggagcgcttc gacggcgtcg aaggtccgcg ccggttcgcc
      661 gtccgccgcg ggctcgagag gccagcccac ggccgcgctg ctgcgcagat cgagctcgct
      721 cgagacgacc gcatagtgtg gacccgtgcc gagcaccggt aagggcacgc gcgcgctgct
      781 gcggccgttc gcggcgggcg tgagcgtcac tcgccccccg aaccaacgct cggagggtgt
      841 gacgacggca aaatacgcga ggtcgcgcgg cacgggcgat tcgatgacga gctcgttgcc
      901 gtccttccgg gcgcgcatgg cgcctggaac gacgggcaac gcgaacgaag cctgcaagct
      961 gtcgttcacg ccgaacgtga cgttcacggc gtgctcttcc ggagcgatct ggaacgagca
     1021 gcgcccgttc gcgtccgtca gccgttctcg cggggtgatg cgcgcgccgg tgccgctcgc
     1081 cgaaacggtc acgttttgcg ccggcgctcc gtcgcgactg accgcgacga agagctcctc
     1141 ttcgaacggc acggccaaag cgccgcgcgc cggtgcgact cgaatctcga actcgccggc
     1201 gtgggtcgtc gcccaaccgc cacgccggcg cgcggcgccc gcccagggtg ccgcagcgag
     1261 ctcgatacgg ccgcgcgcga gctcgctgcc tgcttgagta agcctgagct cgagtggacg
     1321 cgcgccttcg ggcggctcga aggccatttc cgcgcccccc tcgtcgtcga gcggcagcgt
     1381 gcgcgccgcg tcgaacgcgg gcgcgtgcag ctcgaccctg atttgacccc tgctcacggg
     1441 cgcttcgtgc acggcggcgc gctcttcgat caaatcgaag acttcggccc gaaagctcac
     1501 gcggtcgccc gtcgtcgggc cgccccagat ccgcgccacg cgcgtcggac gtgccgcgcc
     1561 gcccgtgacg agagcgagcg cgatcaccgc caccgtggcg acgggcagcg cgtagagcgg
     1621 ccagcggagc
//
LOCUS       DATIML010001113         3756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1678983, whole genome shotgun sequence.
ACCESSION   DATIML010001113 DATIML010000000
VERSION     DATIML010001113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3756
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1678983"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /locus_tag="VLJ38_19125"
     CDS             complement(<1..457)
                     /locus_tag="VLJ38_19125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41703.1"
                     /translation="MDSIDALYAGFVSSLPEKLRPIAGDLPRFLGRCPTATPTWSQVF
                     GHSVTLATPKLVAHALPQAEPDKVRAAATGHALGAIEALARDRLASRQLRDSPELAAL
                     LAELRRARDALLESVWLPASGLTRAADREMDEALKEQNALLRRLSAVSFD"
     gene            complement(468..776)
                     /locus_tag="VLJ38_19130"
     CDS             complement(468..776)
                     /locus_tag="VLJ38_19130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41704.1"
                     /translation="MTAAALDTLHDPHTQLRRLYASLLEEQHRFDEFKQLLALYPVAQ
                     TEEESADAREVRTRLNARINEWVAGEFDGLSAAQVALWRSIVVEERINAGLSVWRESN
                     "
     gene            1001..1297
                     /locus_tag="VLJ38_19135"
     CDS             1001..1297
                     /locus_tag="VLJ38_19135"
                     /inference="COORDINATES: protein motif:HMM:NF017868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HSU41705.1"
                     /translation="MRLFVYGSLRRGRSNHAELAGASFIRSLATAPRCALVERDGYPA
                     LVPGCSAVEGELYAVTYEHLARLDAFEGSGYVRAKVTLADGSAALAYWLAGEAR"
     gene            1294..1512
                     /locus_tag="VLJ38_19140"
     CDS             1294..1512
                     /locus_tag="VLJ38_19140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41706.1"
                     /translation="MTLDGGSLFTSFLVSGLGFVLFEYGRRMRRPPQLAVGLVLLIYP
                     YFVPNVWAMLGIAVLLVALLWVALLRGM"
     gene            1525..2370
                     /locus_tag="VLJ38_19145"
     CDS             1525..2370
                     /locus_tag="VLJ38_19145"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSU41707.1"
                     /translation="MKLVRFGPPGRESPGVLVGGARRDASGAFRDWDREFFETDGFER
                     LGELLQLGELPLVPEQERWGAPVARPGKLVGVGLNYVDHAKETGAEIPAEPVLFLKAP
                     NAVVGPYDPVRLPRGSTKTDYEIELGVVIGRPARYLESAAAARESIAGYCISHDVSER
                     GLQFERGGQWTKGKSSDTFNPLGPFLATADEVPDPQALALVLAVNGERRQAGSTRDMV
                     FGVERLVWYISQFMALEGGDVVTTGTPAGVGFGMKPPRFLGPGDVCDLEIERLGRQRQ
                     LFERA"
     gene            complement(2377..>3756)
                     /locus_tag="VLJ38_19150"
     CDS             complement(2377..>3756)
                     /locus_tag="VLJ38_19150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41708.1"
                     /translation="PIGVIDARSEQIVTHGWDELRELVVGASSARLAFAGGSFSFPLA
                     SAAQGEELRARSNEYRERVSASDTAEKDLVVMDPLRDNGFRNPFSPTDSMRPPRPAKL
                     PLLALGLLAGAGLLAFGAFELRNHGGERAIYARAVMQNSVESYRAYLARGGKRPEVGD
                     LLLPRAELREAIADNNVEAVERFAETHPGSKIEGEVKTALQAALRKELEAAKAKGTIT
                     ALREFEAKYKTHLALVPELAAARVAYLAGVLDHFQKAAKPSKELWLLARRLVVYADQH
                     PGAKVALRFSQQESHTLEKNEHMLGASAYYGGDKTLPSHFLLGESARSGERRAGAELT
                     TALDRVFPTDLLRFEVGAPVPAGPAPHFDEPTIFVSYRFEISSPLVSKKPRGIYSAVG
                     LVATTALTIPDHEPAQESKYTAWHAPDVKRVEAGELLPENVYNDLVARAWSKFTAKYV
                     APWVGEAAK"
BASE COUNT          544 a         1251 c         1302 g          659 t
ORIGIN      
        1 cgtcgaacga cacggcgctc aaccgacgca gaagggcatt ttgctctttg agcgcctcgt
       61 ccatctcgcg gtccgcggcg cgcgtgagac ccgatgcggg gagccagaca ctttcgagca
      121 gcgcgtcccg agcgcgccgg agctcggcga gcagcgcggc gagctcgggg ctgtcgcgca
      181 gctggcgcga ggcgagccga tcccgggcga gcgcctcgat cgcgccaagc gcgtgcccag
      241 ttgccgctgc gcggaccttg tccggctccg cctgcggcag ggcgtgcgcc acgagcttcg
      301 gcgtcgcgag cgtcaccgag tggccgaaca cctgagacca ggtcggcgtg gccgtgggac
      361 agcgccctag gaaacggggg agatccccgg cgatggggcg cagcttctcg ggcagggagc
      421 tgacgaagcc agcataaaga gcatcgatgc tgtccacttc ttgcgaatca gttcgattct
      481 ctccagacgg acaggccggc gttgatgcgc tcctcgacga cgatgctacg ccagagtgcg
      541 acttgggcgg cgctgaggcc atcgaactca ccggcaaccc attcgttgat acgagcgttc
      601 aggcgcgtcc tgacttccct ggcgtccgcg ctctcctctt cggtctgggc gaccgggtag
      661 agcgcgagca attgcttgaa ctcgtcgaac cggtgctgct cctcgagcaa cgaggcgtag
      721 agtcggcgga gctgagtgtg ggggtcgtga agcgtgtcga gagcggctgc ggtcatcgtg
      781 ggacctccaa tgcacttctg gtcgcaccac cggtcccccc ctgtgtgcaa ggagcatgcg
      841 cggtgccgct aacaagataa gcttctgaat tcgttgactt cctgtgcgaa cataggctcg
      901 acccgtgccc ggatccggcc agccgagcgc ccggatccga ccaagcgcgc agcgttcgag
      961 ctcctggccg gcttcgtgct gtgctcgagt ggtgccaggc gtgcgtcttt tcgtttacgg
     1021 ctcgcttcgc cgaggacgct cgaaccacgc agagctcgcc ggtgcaagct tcatccggtc
     1081 gctcgcgacc gcgccgcgct gcgccttggt cgaacgcgac gggtatccgg cgctcgtccc
     1141 gggctgttcg gccgtcgaag gcgagctcta tgcggtgacg tacgaacacc tcgcccggct
     1201 cgacgccttc gaggggagcg gctacgttcg cgcaaaagtg acgctcgccg acggcagtgc
     1261 tgctctcgcg tattggctcg ccggcgaggc gcgatgacgc tcgacggcgg ttcgctattt
     1321 acgagctttc tcgtctccgg cctgggcttc gtgctcttcg agtacggccg gcgcatgcgg
     1381 cgcccgcccc agctggccgt cggcctggtc ctgctcatct atccctattt cgtgccgaat
     1441 gtttgggcga tgctcggcat cgccgtgctc ctggtcgcgc tgctctgggt cgcgctgttg
     1501 cgcggcatgt gatgagctct ccgcatgaag ctggttcgtt tcggtccccc tggccgggag
     1561 agtccgggcg tcctcgtcgg cggcgctcgc cgcgacgcgt ccggcgcctt ccgcgactgg
     1621 gaccgtgaat ttttcgagac cgacggcttc gagcgactcg gcgagctctt gcaactcggt
     1681 gagctaccgc tcgtgcccga acaggagcgc tggggcgcgc ccgtcgcgcg gccgggcaag
     1741 ctggtcggcg tcgggctcaa ctacgtcgat cacgccaagg agacgggcgc cgagatcccc
     1801 gccgagccgg tgttgttcct caaggcgccg aacgccgtgg tcggcccgta cgatccggtg
     1861 cgcctgccgc gcggcagcac caagacggac tacgaaatcg agctcggcgt cgtgatcggt
     1921 cggccggcgc gctacctcga gtcggcggca gccgcgcgcg agagcatcgc ggggtactgc
     1981 atttcgcacg acgtttcgga gcgtgggctg caattcgagc gcggtggaca gtggacgaag
     2041 ggcaagtcga gcgacacgtt caatccgctc ggcccgttcc tcgcgacggc ggacgaagtg
     2101 ccggatccgc aggcgctcgc gctcgtcctc gccgtgaacg gcgagcgccg gcaagcgggg
     2161 agcacgcgcg acatggtctt cggcgtcgag cggctcgttt ggtacatctc gcaattcatg
     2221 gcgctcgagg gcggcgacgt cgtgaccacg gggacgccag cgggcgtcgg gttcggcatg
     2281 aagccgccgc gcttcctcgg tcccggcgac gtgtgtgatc tcgagatcga acggctcggt
     2341 cgtcagcggc aactcttcga acgcgcgtga cgcgacttac ttcgcggctt cgccgaccca
     2401 gggcgcgacg tatttggccg tgaacttgct ccacgcgcgc gccacgagat cgttataaac
     2461 gttctcgggc aagagctcgc ctgcctcgac gcgcttcacg tcgggcgcgt gccaggccgt
     2521 gtacttcgat tcttgcgcgg gctcatgatc gggaatggtg agcgccgtcg tcgccactag
     2581 gcctacggcc gagtagatcc cgcgcggctt cttgctcacg agcggcgacg agatctcgaa
     2641 ccggtagctc acgaagatgg tgggttcgtc gaagtgcggc gcgggccccg cgggcacggg
     2701 cgcgccgacc tcgaagcgca agaggtcggt cgggaagacg cggtcgagcg ccgtcgtcag
     2761 ctccgctccc gctcggcgct cgccgctccg cgccgactcg ccgagcagaa aatgggacgg
     2821 cagcgtcttg tcgccgccgt agtacgcgct cgcgcccagc atgtgctcgt ttttttcgag
     2881 cgtgtgcgac tcctgctgcg aaaagcgcag cgcgaccttg gcgccggggt gctggtcggc
     2941 atagacgacg agacggcgcg cgagcagcca gagctccttg ctcggcttgg cggctttctg
     3001 gaagtggtcg agcacgcccg cgaggtaggc gacgcgcgcc gccgcgagct ccgggacgag
     3061 cgcgaggtga gtcttgtact tcgcttcgaa ctcgcggagc gccgtgatcg tccccttggc
     3121 cttggcggcc tcgagctcct tgcgcagggc cgcttggagc gcggtcttca cttccccttc
     3181 gattttcgaa cccgggtgcg tctcggcgaa gcgctcgacg gcctcgacgt tgttgtcggc
     3241 gatcgcctcg cggagctcgg cacgcggcag gagcaagtcg cccacttccg gccgcttgcc
     3301 cccgcgcgcc aggtaagcgc gatagctctc gacgctattt tgcatgactg cgcgcgcgta
     3361 gatcgcacgt tcgccgccgt ggttgcgcag ctcgaacgcg ccgaaggcga gtaggccggc
     3421 gcccgcgagc aaaccgagcg cgagcagcgg cagcttcgct ggacgaggcg gccgcatgga
     3481 gtccgtcggc gaaaacggat ttctgaagcc gttgtcgcgc agcggatcca tcacgacgag
     3541 gtctttttcc gccgtgtcgc tggccgagac gcgctcccga tattcgttcg aacgggccct
     3601 gagctcctcg ccctgcgcgg cgctcgcgag cgggaacgag aacgagccgc ccgcgaacgc
     3661 gagccgcgcg ctgcttgcac cgaccacgag ctcgcgcagc tcgtcccaac cgtgcgtgac
     3721 gatctgctcg ctgcgggcgt cgatgacgcc gatcgg
//
LOCUS       DATIML010001114         1872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_230831, whole genome shotgun sequence.
ACCESSION   DATIML010001114 DATIML010000000
VERSION     DATIML010001114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230831"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VLJ38_19155"
     CDS             complement(<1..658)
                     /locus_tag="VLJ38_19155"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSU41709.1"
                     /translation="MISTLLLDVGGTLVMPNFERMADEYAADGVTVSAASLERAEAEV
                     RLAIERPEFVRSHTDPWLAFMHDIARFAGVNDPPSDAFERLRTYHDTMNLWERVIAGT
                     ETALRTLAGRYRLGVVSNANGTVRKKLERVGLGQFFETVVDSAEEGSEKPDPRLFRVA
                     LERLGARGEDQHVRRALRDHPFELLAQPALAGAGGAGDQQRSEAAAVDHAIEHLAHAR
                     D"
     gene            complement(661..1443)
                     /locus_tag="VLJ38_19160"
     CDS             complement(661..1443)
                     /locus_tag="VLJ38_19160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU41710.1"
                     /translation="MPGETLISFSRVFKAFGPKIVYSGLDLEIKRGEVLTICGGSGVG
                     KSVMLKMLIGLLVADSGKIRFDGLELTKLEEYELSDVRRRIAMLFQSGALFDSLTVGE
                     NVGYGLEEHFHYTMTEAQRAERVAWALELVGLPGIEPMQPSDLSGGMRKRVGLARAIA
                     VQPEVLLYDEPTTGLDPINTARVNHLITGLQERLNITSIVVTHDMRSAFSISDRIAMV
                     HSGRIIMVGTVDEFRSSPDPRVSDFIQGRAPVKESVEALLNS"
     gene            complement(1517..>1872)
                     /locus_tag="VLJ38_19165"
     CDS             complement(1517..>1872)
                     /locus_tag="VLJ38_19165"
                     /inference="COORDINATES: protein motif:HMM:NF037628.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HSU41711.1"
                     /translation="ANGRDLSAQAASAAVKLAPGDSLARVLGDFALLEPCGEGNPSPE
                     LELEGTLLRAREVRGGHLKLELELASGERVSAFGANMGERVLEPGSSVSVAGRLVRDR
                     FRGGDAAEIRIQRLG"
BASE COUNT          311 a          623 c          641 g          297 t
ORIGIN      
        1 gatcgcgcgc atgagcgagg tgctcgatcg cgtggtcgac ggcggcagcc tcggagcgct
       61 gctgatcacc ggcgccgccg gcaccggcaa gagccggctg cgccagaagc tcgaatggat
      121 gatcgcggag cgcgcgccgc acatgctggt cctctccgcg cgcgccgagc cgctcgagcg
      181 cgacgcgaaa caggcgcgga tccggcttct cgctgccttc ctccgccgaa tcgactaccg
      241 tttcgaaaaa ttggccgagg ccgacgcgct cgagcttttt gcggacggtg ccgttggcgt
      301 tcgagaccac gccgagccgg tagcgtccgg cgagcgtccg gagcgcggtt tcggttcccg
      361 cgatcacgcg ctcccagaga ttcatggtgt cgtggtacgt gcgcaaccgc tcgaaggcgt
      421 cgcttggcgg gtcgttcacg cccgcgaagc gcgcgatgtc gtgcatgaac gcgagccagg
      481 gatcggtatg gctccgcacg aactccggcc gttcgatcgc gagccgcacc tccgcttcgg
      541 cgcgctcgag cgacgcggcg ctcaccgtca cgccgtccgc cgcgtattcg tccgccatgc
      601 gctcgaagtt cggcatcacg agcgtgccgc cgacgtcgag gaggagcgtc gagatcatgg
      661 ctaactgttg agcaaagctt cgacgctctc tttgaccggc gcgcgacctt ggatgaaatc
      721 ggagacgcgc gggtcgggcg aggagcgaaa ttcgtcgacc gtgccgacca tgatgatgcg
      781 gccggagtgc accatcgcga tgcgatcgct gatgctgaac gcgctccgca tgtcgtgcgt
      841 gacgacgatg ctcgtgatgt tcaaacgctc ttgtaggccc gtgatcaggt ggttcacgcg
      901 cgcggtgttg atgggatcga ggccggtcgt gggctcgtcg tagagcagga cttcgggctg
      961 gacggcgatg gcgcgggcga ggcccacacg cttgcgcatg ccgcccgata agtcggacgg
     1021 ttgcatgggc tcgatgcccg gcaaaccgac gagctcgagc gcccaagcga cgcgctcggc
     1081 gcgctgcgct tcggtcatcg tgtaatggaa gtgctcctcg agaccgtagc cgacgttttc
     1141 accgacggtg agggaatcga aaagcgcgcc gctctggaac aacatcgcga tgcggcggcg
     1201 tacgtcggag agctcgtact cctcgagctt cgtgagctcg agaccgtcga aacgaatctt
     1261 gccggaatcc gcgacgagca ggccgatgag catcttgagc atcacgctct tgccgacgcc
     1321 ggagccgccg cagatggtca ggacttcgcc ccttttgatc tccagatcga ggcccgagta
     1381 cacgatcttc ggcccgaagg ccttgaaaac acgcgagaag gagatgagcg tctcgccggg
     1441 cacggggcca cgatagcgcg ccgcgcggcg ccggtcactc gcgcgcgaaa gggtaacctt
     1501 cgcgccgcgg acgcgctcag ccgagtcgct ggatgcggat ctcggcggcg tcgccgcccc
     1561 gaaaacgatc gcgcacgagc cgcccggcga cgctcacgct gctgcccggc tcgagcacgc
     1621 gctcgcccat attggcgccg aacgcgctca cccgctcacc cgacgcgagc tcgagctcga
     1681 gcttcaaatg gccgccgcgc acctcgcgcg cgcggagcag ggtcccttcg agctcgagct
     1741 cgggagacgg attgccttcg ccgcaaggct cgagcagcgc gaaatccccg agcacccgcg
     1801 cgagcgaatc gccgggagcg agctttacgg ccgcggacgc ggcttgcgcg gacaggtcgc
     1861 gcccgttggc cg
//
LOCUS       DATIML010001115         3528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3699240, whole genome shotgun sequence.
ACCESSION   DATIML010001115 DATIML010000000
VERSION     DATIML010001115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3699240"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VLJ38_19170"
     CDS             <1..377
                     /locus_tag="VLJ38_19170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein phosphatase"
                     /protein_id="HSU41712.1"
                     /translation="VGDSRIYRVRAQEAEQLTEDHTLIAWQLKQGLITPEQAKVSRQR
                     NVITRAVGSREYVQVDTSIWEASVGDAYLVCSDGLHGYLKLEEIPAILAEGGALAVNR
                     LIDLANSRGGKDNITAIVVEVC"
     gene            458..1501
                     /locus_tag="VLJ38_19175"
     CDS             458..1501
                     /locus_tag="VLJ38_19175"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HSU41713.1"
                     /translation="MTSLRRVGVVMGGTSAEREISLRSGLAVAEGIERLGHEVVPVIL
                     SEETDAYSAIVAADLDVAFLALHGRLGEDGCVQGLLELIGIPYTGSSVLSSALAMDKL
                     KAKEMFRLHNVPTPPYYTLEASQLDELDQVHGSFGFPVIVKPRREGSSLGVARVDGPS
                     ELRNAVLDALTYDGSVLVERFVSGKEIAVGILDGRVLGAIEIAPAGGVYDYQAKYTPG
                     LTEYFMPARLPTARYRGVLNLAERAAQALDTSGAVRVDLLVTEGQNEYVLEVNTLPGM
                     TETSLLPKIAAAAGFDFDALCAAMLERARLHTGMPRHARQPESSYIDLSPASTEEPAL
                     VATASKRQRAQSA"
     gene            complement(1544..>3528)
                     /locus_tag="VLJ38_19180"
     CDS             complement(1544..>3528)
                     /locus_tag="VLJ38_19180"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HSU41714.1"
                     /translation="MGATLPILTRALRDGEGALSRERQLGALYAANTCGGAGGALLAA
                     YLALPLLGLHGTVWAAAGLSALVGVAALRLGRKVGPAPLGTHGEAAASATRAAFEPSE
                     HEVLVLVALGFASGCLAFAAEVIFTHLLALLIGNSAYAFGLILAVFLCCLFVGAARAA
                     AFRARFGDAALGLGLAATALALGLTLPLWDQLPRLFAALGPVVVTFGGREVVRALAAF
                     FVLCVPTTLMGLTFPLLLQQVARTSAPSRWVGRLTAVNTLGAVFGALGTGYGLLPWLG
                     SQRSLEVVVGLFALAALAASWLALPKLRRTIIGLAASAGVLVPLLPRWDLARLTSGSN
                     VYFDGWSKPEAIPFLREDVHGGVTTVTRNKGVLTLLTNGKFQGNTGWEMSAQRFFAHY
                     PALFVSHFDHALVIGLGTGTTLGTLAAYPWQKLDVVEISPSIVEAARAYFGAGNLGAI
                     DDPRVTVHHADGRNFALVDDGHYDLVSMELTSIWFAGASNLYSREFYGLVRSRLEPGG
                     VFQQWVQLHHVYRRDFATVVGTLRSEFSHVALFYGGGQGILVASDAPLRASRARLDEL
                     EALPAMQRVLPDRRHLRELTGDILALDAGLDAFLDESAELAGLERSELVSTDQSLYLE
                     YATPRGNVLPWATREALVRDIGRFRDAAAVSNLLLP"
BASE COUNT          666 a         1206 c         1149 g          507 t
ORIGIN      
        1 aggtgggtga cagccgcatc taccgcgtgc gcgctcaaga agccgaacaa ctgacggaag
       61 atcacacact cattgcctgg cagctcaagc aaggtctcat cacgcccgag caagcgaagg
      121 tcagccggca gcgcaacgtc atcacgcgcg cggtcggcag ccgcgagtac gtgcaggtcg
      181 acacgagcat ctgggaggcc agtgtcggcg acgcctacct cgtctgtagc gacggcttgc
      241 acgggtacct aaagctcgag gagatccccg ctatcctcgc ggaaggtgga gctttagcgg
      301 tcaatcgctt gatcgacctg gcgaacagtc gtggcggcaa ggacaacatc accgccatcg
      361 tcgtcgaagt ctgctgacgt cgcgcgattc ttggcccgaa agggcgcatt tggctaccga
      421 acggtgaggg tcctagaccc gccctggagg ccagagcatg acgagcttga gacgtgtcgg
      481 tgtggtgatg ggaggaactt ccgcggagcg cgagatttcc ctgcgttccg ggctcgccgt
      541 cgccgaaggg atcgagcgac tcggccacga ggtcgtgccc gtcatcttga gtgaggagac
      601 ggatgcgtac tccgcgatcg ttgcggccga cctcgacgta gccttcctcg cacttcacgg
      661 ccggctcggt gaagacggct gcgtgcaggg tttgctcgag ctcatcggca ttccgtacac
      721 gggctcgagc gtcctctcga gcgcgctcgc gatggataag ctcaaggcga aagagatgtt
      781 tcgcctgcac aacgtaccga caccgccgta ctacacgctc gaggcctccc agctcgacga
      841 gctcgaccag gtgcacggtt ctttcggttt ccccgtgatc gtcaagccgc ggcgtgaagg
      901 ctcgagcctc ggcgtcgcac gcgttgatgg tccgagcgag ctccgcaacg ccgtgctcga
      961 cgcgctcact tacgatggtt ccgtcttggt cgagcgtttc gtcagcggca aggaaatcgc
     1021 tgtcggaatc ctcgacggcc gcgtgctcgg cgccatcgaa atcgcgccgg ccggcggggt
     1081 ctacgactac caagcgaagt acacgccggg cctcaccgag tacttcatgc ccgcgcgcct
     1141 gccgaccgcc cgctatcgcg gcgtgttgaa cctggccgag cgcgcggcgc aagcgctcga
     1201 tacctcgggc gccgttcgcg tcgatctcct cgtcaccgag ggacaaaacg aatacgtgct
     1261 cgaagtgaac acgctcccgg gtatgacgga gacgagcctc ttgccgaaaa ttgccgctgc
     1321 ggcgggtttc gacttcgatg cgctctgcgc cgccatgctc gagcgagcac gcctgcacac
     1381 cggcatgccg cgccacgcgc gccaaccgga gtcgtcgtac atcgacctct cgccggcgag
     1441 cacggaagaa ccggcactcg tcgctacggc gtccaagcgg cagcgcgcgc agagcgcctg
     1501 aacccggctc acgtcgccgg gcgttggcgt acggcggcgc ggctcagggc aggagcaagt
     1561 tagagacggc cgctgcgtct cgaaagcgcc caatgtcgcg cacgagcgcc tcgcgcgtcg
     1621 cccaaggcag cacgttcccg cgcggcgtcg catactcgag atacagactt tgatcggtcg
     1681 agacgagctc cgagcgctcg agtcccgcga gctcggcgct ttcgtcgagg aaggcgtcga
     1741 gccccgcgtc gagcgccaag atgtcgcccg tgagctcgcg cagatgccgg cgatcgggga
     1801 gcacgcgctg catcgccggg agcgcctcga gctcgtcgag ccgcgcgcga gaggcgcgga
     1861 gcggggcgtc ggacgcgacg agaatgcctt gcccgccgcc gtaaaagagc gccacgtgcg
     1921 aaaactcgct tcgcagcgtg ccgacgaccg tcgcgaagtc gcgccggtag acgtggtgca
     1981 gctgcaccca ttgctggaac acgccgcccg gctcgagccg cgagcgcacg agcccgtaaa
     2041 actcgcggct atagaggttc gacgcgcccg cgaaccaaat gctcgtcagc tccatgctga
     2101 cgaggtcgta gtggccgtcg tcgacgagcg cgaaattgcg cccgtccgcg tgatgcaccg
     2161 tcacacgcgg atcatcgatc gcgccgagat tgcccgcgcc aaagtaggcc cgagctgctt
     2221 ccacgatcga cggcgagatc tcgaccacgt cgagcttctg ccagggatag gctgcgagcg
     2281 tgccgagcgt cgtgcctgtg ccgagtccga tcacgagcgc gtggtcgaaa tgcgaaacga
     2341 acagggcagg gtagtgcgcg aaaaagcgct gcgcgctcat ttcccagccc gtattgccct
     2401 ggaatttgcc gttcgtcagc agggtgagca cgcccttgtt gcgcgtcacc gtcgtcacgc
     2461 cgccgtgcac gtcttcacgt agaaatggga tggcctcggg cttactccag ccgtcgaagt
     2521 agacgttcga gccactcgtc agccgagcaa gatcccagcg tggcaggagt ggcacgagca
     2581 cgccggcgct cgcagcgagc ccgatgatcg tccgtcgcag cttgggtaac gcgagccatg
     2641 acgcagcgag cgcagcgagc gcgaacagcc ccaccaccac ctcgagtgaa cgctgcgagc
     2701 cgagccacgg cagaagcccg tagcccgtgc cgagggcgcc gaacactgcg ccgagcgtgt
     2761 tcactgccgt gaggcggccc acccaacgac tcggcgcgct cgtgcgcgcg acctgctgca
     2821 agagcagggg gaaggtgagg cccatcagcg tggtcggcac gcacaggacg aagaaagccg
     2881 cgagcgcgcg cacgacctcg cgaccgccga aggtcacgac cacgggacct agcgccgcga
     2941 aaagacgcgg caactggtcc cagagcggca gcgtgagccc gagcgcgagc gccgtcgccg
     3001 ccaagccgag tccgagcgcc gcgtcgccga agcgcgctcg aaacgccgcc gcgcgcgccg
     3061 cgcccacgaa cagacaacac aaaaagaccg ccaaaatcag cccgaaggcg tacgcgctat
     3121 tgccaattaa aagcgcgagc aggtgcgtga aaatcacctc cgccgcgaac gccaaacacc
     3181 ccgacgcgaa cccgagcgcg acgagcacca aaacttcgtg ctcggacggc tcgaacgccg
     3241 cacgcgttgc gctcgccgcg gcctcgccgt gcgtgccgag cggcgccggg cccaccttgc
     3301 gaccgagtct cagtgctgcg actccaacga gcgcgctcaa acccgcggcg gcccacaccg
     3361 tcccgtgcaa gccgagcaac ggtaacgcca gatacgccgc gagcagcgct ccgccggccc
     3421 cgccacacgt attggcggcg tacagcgcgc cgagctgacg ctcacgcgaa agcgctccct
     3481 caccgtctcg gagcgcacgc gtgaggatcg gcaacgtggc gcccattg
//
LOCUS       DATIML010001116         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3408492, whole genome shotgun sequence.
ACCESSION   DATIML010001116 DATIML010000000
VERSION     DATIML010001116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3408492"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VLJ38_19185"
     CDS             <1..725
                     /locus_tag="VLJ38_19185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSU41715.1"
                     /translation="VVLGAILLAAPLVAFVPMASLAGLLLLVAWNMSEVRHFVNILRI
                     APKSDVFVLLSCYLLTVVFDMVIAVSFGVVMAALLFMRRTAELTQARMLEGARGESDY
                     ALEPGVAVYEIAGPLFFGAAQNAMGALGSVAADTRVVVLALGGVPSIDATGFVALESA
                     LSRLRTLKKWVVLTGPLPEPRVIFERANLPQHHEHVRFAETVEAGLALARELVGMRAP
                     GDGLAPPRRPNLSPSSRPVASA"
     gene            781..>1508
                     /locus_tag="VLJ38_19190"
     CDS             781..>1508
                     /locus_tag="VLJ38_19190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41716.1"
                     /translation="MRRLAVLVAFGLMASTRTALAYRPFDGTDADVAKRGELELEIGT
                     VGYLHGRDGTAVAPVQVVNFGPTDRVELVLAGRPFVPAYGAAGERFALVDTEASIKGV
                     LREGVLQGRRGPSIALELGALLPTLNGEPGWGAAAALIVSERVSFLTLHLNVQATRTR
                     AANADGIVDLIAEGPPIFARTRPVAELSLEHEFGVTRTAAALVGLISQVSERFALDGA
                     ARFAARGRDHVLELRGGFTWDIDLL"
BASE COUNT          190 a          508 c          547 g          263 t
ORIGIN      
        1 tggtcgtgct cggggcgatc ctactggcgg cgccgctcgt cgcgttcgtg ccgatggcgt
       61 cgctcgcggg cttgctcctg ctcgtggcgt ggaacatgtc cgaggtgagg cacttcgtga
      121 acatcctgcg catcgcgccg aagagcgacg tgttcgtgct gctcagttgt tacttactca
      181 ccgtcgtgtt cgacatggtg atcgcggtct cgttcggggt ggtgatggcg gcgctcttgt
      241 tcatgcgccg gacggcggag ctcacgcagg cgcgcatgct cgagggggcg cgcggcgagt
      301 cggactacgc gctcgagccg ggcgtcgccg tgtacgagat cgcaggtccg ctcttcttcg
      361 gtgccgcaca gaacgcgatg ggagcgctcg gcagcgtcgc ggccgacacg cgcgtcgtcg
      421 tgctcgcgct cgggggcgtg ccgtcgatcg acgcgacggg gttcgtcgcg ctcgagagcg
      481 cgctctcgag gctcaggacc ctcaagaaat gggtggtgct cacgggaccg ttgcccgagc
      541 cgcgtgtcat cttcgagcgc gcgaacctgc cgcagcacca tgagcacgtg cgcttcgccg
      601 aaaccgtcga agcagggctc gcgctcgcgc gggagctcgt cggtatgcgc gcgccgggtg
      661 acgggttggc cccgccgcgc aggcccaatt tatcgccctc gagccggccc gtcgcgtcgg
      721 cctgagccta gccggcgaat cggcccgccg ttccgagctc agcgcgagat aatcgcgggc
      781 gtgcgtcggc ttgcggtctt ggtcgcgttc gggctcatgg cctcgacgcg gacggcgctc
      841 gcgtatcgac ccttcgacgg gacggacgcg gacgtcgcca agcgcggcga gctcgagctc
      901 gagattggga cggtcggtta cctgcacggg cgggacggca ctgccgtcgc acccgtgcag
      961 gtcgtcaact tcggtcccac cgatcgcgtc gagctcgtgc tcgccgggcg gccgttcgtc
     1021 ccggcgtacg gcgcggcggg cgagcgcttc gcgctggtcg acacggaggc ttcgatcaaa
     1081 ggcgtcttac gcgagggggt gctgcagggg aggcgggggc cgagcattgc gctcgagctt
     1141 ggcgcgctgc tcccgaccct caacggcgag cccggctggg gcgccgccgc tgcgctcatc
     1201 gtctcggagc gcgtgagctt tctcacgttg cacttgaacg tccaagcgac ccgcacacgc
     1261 gccgcaaacg cggacggcat cgtcgatctc atcgccgagg gaccgccgat cttcgctcgc
     1321 acgcgccccg tggccgagct ctcgctcgaa cacgaattcg gcgtgacccg gacggccgcg
     1381 gcgctcgtcg ggctcatctc gcaagtgtcc gagcgtttcg ctctcgacgg ggcggcgcgt
     1441 ttcgcggcga ggggccgcga tcacgtcctc gaactccgtg gcggcttcac gtgggacatc
     1501 gacctgct
//
LOCUS       DATIML010001117         5158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1971120, whole genome shotgun sequence.
ACCESSION   DATIML010001117 DATIML010000000
VERSION     DATIML010001117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5158
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1971120"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VLJ38_19195"
     CDS             <1..422
                     /locus_tag="VLJ38_19195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41717.1"
                     /translation="DPIPPGYRLVTRKRRGLIIAGSIVTGVPWAFGVMGAVGNDFQDN
                     TGLLLIPVVGPWALLATNTARDGNCGPTDTICDGSKAALRSALVFDGIVQLAGASMFV
                     AGMFFPRTRLVRSDVVVSVVPTTFGHGGYGIGALGSF"
     gene            complement(501..995)
                     /locus_tag="VLJ38_19200"
     CDS             complement(501..995)
                     /locus_tag="VLJ38_19200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41718.1"
                     /translation="MHTRRSFLLTSTSALVLIATSSFALPVDAGEARIRLALVVGKDS
                     PITDIALPDLKRLYLGEHINAAGRRLIPLNLAPMLRERVGFDKTVLNMSPDTVARYWI
                     DRKIRGDSGPPKSIDSADLVQRVVGRLEGAIGYVQAAELRPEVKVLRVDGKLPNDGGY
                     ALEF"
     gene            complement(995..2296)
                     /locus_tag="VLJ38_19205"
     CDS             complement(995..2296)
                     /locus_tag="VLJ38_19205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41719.1"
                     /translation="MAAKPEPAAATAPAAAAPAKSDADADADAEAAAAAAAAAAGGGG
                     SESAASDSEFKLNLYGFSDFTYSTTFGRFDYAQTHSSFAVGKLNLYAGADLGDNWRAL
                     SEIRFMYLPNGTTPLVGANGSAPTRIDTTVADYTDLGRPVRWGGISIERAWLEHTFHP
                     AFTLRVGQFLTPYGIWNVDHGSPVIIGVRRPFIVGEALLPEHQTGLEAYGSFNFGPSQ
                     IGYHLTLSNGRGPIDTYQDLDHNKAVGGRVFFKHDASFGTLTIGASAYKGSYTDAHSE
                     YGVSPAGDLVINNAVVQAYDELALAADVKWELGGLLVQSEAIMNDTAYNEPGRPTTFA
                     FDGGPPGFMPDARRWGVYALAGYRTPLFGIMPFFGGEYYETGTHAFTPPAAAVWGGLN
                     SRPTARVVLKAQFTHSWFNGKFPGKDPGHFNGLDLQAAWSF"
     gene            complement(2482..2868)
                     /locus_tag="VLJ38_19210"
     CDS             complement(2482..2868)
                     /locus_tag="VLJ38_19210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41720.1"
                     /translation="MGLGSPCSTSEPCADPTFGVCAPGADGSGYCTNACAAAEDCSGG
                     YACNTSAAESFCERPPSGTGKACTSDADCTGTESTYCDLFVTHACLVQGCTVSPNNCF
                     SGTECCDLSAFGVPQPICVAEGGCPK"
     gene            complement(3278..>5158)
                     /locus_tag="VLJ38_19215"
     CDS             complement(3278..>5158)
                     /locus_tag="VLJ38_19215"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41721.1"
                     /translation="NMSHEIRTPMNGVLGMIELLHGTQLNEKQKRYAKTLHASANGLM
                     TVLNDILDFSKIEAGKIELHPVPTKTRDLLEEVGELFAARAHLKRVELVCHTDRALPA
                     YMLVDRDRVKQVLSNLAGNAVKFTERGQVALRALRETRDGKPILRFEVSDTGIGIPEE
                     AKGRLFGAFSQVDGSLTRKYGGTGLGLAISKQLVHLLGGEIGVDSVPGKGSTFWFWIP
                     LVEAAVDAAEELTPHAKVRTLIVDDNETNRFVLEELLTSWNIEHASASDAKSALELLA
                     VAARDDRPFGLMVTDMNMPDVDGLTLARRVLEAEHDRKPVIVLLTSQNEDSLPEEAAL
                     FVDGFMQKPVRADDLAQCIGRLLSSEAPKHQSSKRKLNISSVRGPADDRRVLVVEDNP
                     INQEVMTEILRELGYEADIADNGQRALELLEQRAYPLILMDCQMPVLDGYQTTAEIRQ
                     REGGERRVPIIACTAHALAEERAKVLAAGMDDYVSKPVSQQALAEALERWWPVDTASP
                     APKAAPKVANAARPGPAPGSALDPSVQRSERVTRLFLKNAPRDIEAIEAAISTGDPEL
                     VRQAAHRLKGGCLAIGVPRMASVCVQLEGNPANRAELLGELEHEYQRAKARLEASLTA
                     VN"
BASE COUNT          814 a         1670 c         1767 g          907 t
ORIGIN      
        1 gcgatcccat tccgccgggc tatcgcttgg tgacccgcaa gcggcggggc ctcatcatcg
       61 cgggctcgat cgtcaccggc gtgccgtggg ccttcggcgt gatgggagcc gtcggcaacg
      121 acttccagga caatacgggg ctcttgctca tccccgtggt cggaccttgg gcgctgctcg
      181 cgaccaacac ggcgcgcgac ggcaattgcg gaccgacgga cacgatctgt gacggaagca
      241 aggcggcttt gcggagcgcg ctcgtgttcg acggcatcgt gcagctagct ggcgcgagca
      301 tgttcgtggc gggcatgttc ttcccgcgca cgcgcctcgt gcgcagcgac gtcgtggtga
      361 gcgtcgtccc tacgacgttc ggccacggcg gctacggtat cggcgcgctc ggcagcttct
      421 aaccgagcga gctcggcggc ggcgccgcgg cacggccgag tcggccgcgc cgcgcgcgct
      481 ggatcacgcg gaatccgtgc tcaaaattcg agcgcgtacc cgccgtcgtt cggcagcttg
      541 ccgtcgacgc gcagaacttt cacttcgggc cgaagctccg cggcctgcac gtagccaatt
      601 gcgccctcga gccggccgac gacgcgctgc acgaggtccg cggagtcgat ggatttcggt
      661 ggccccgaat caccgcggat cttgcgatcg atccagtagc gggcgaccgt gtcgggcgac
      721 atgttgagca cggtcttgtc gaagcccacg cgctcgcgga gcatcggtgc gaggttcagc
      781 gggatcaaac gccgtccggc ggcgttgatg tgctcgccga ggtagaggcg cttgagatcg
      841 ggcagcgcga tgtccgtgat cgggctgtct ttgccgacca cgagtgcgag tcggatgcgc
      901 gcctcgcccg catcgacggg caatgcgaaa ctcgaggtcg cgatcagcac gagcgcgctc
      961 gtcgaagtca acaggaagga acgtcgtgtg tgcatcagaa gctccacgcc gcctgcaggt
     1021 cgaggccgtt gaagtggccc gggtccttgc ccggaaactt accattgaac caagagtggg
     1081 tgaattgcgc tttcaatacc acgcgcgccg tcgggcgtga gttcaagccg ccccagaccg
     1141 ccgctgcggg tggagtgaac gcgtgcgtgc ccgtctcgta atactcgccg ccgaagaacg
     1201 gcatgattcc aaagagcggt gtccgatagc ccgcgagcgc gtaaacgccc cagcgccggg
     1261 cgtcgggcat gaagcccggc ggcccgccgt cgaaggcgaa cgtggtcggt cgccccggct
     1321 cgttgtacgc cgtgtcgttc atgatggctt cggactgcac gagcaagccg cccaattccc
     1381 atttgacgtc cgcggccagg gccaactcgt cgtaggcctg caccacggcg ttgttgatca
     1441 ccaaatcacc cgcgggcgac accccgtact cggaatgcgc gtcggtgtaa ctgcccttgt
     1501 aggcggaggc gccgatggtg agggtgccga agctggcgtc gtgcttgaag aacacgcgac
     1561 cgccgacggc cttgttgtga tcgaggtctt gatacgtgtc gatcgggccg cggccgttcg
     1621 acaaggtcag gtgatagccg atttgcgagg ggccgaagtt gaagctgccg taagcctcga
     1681 ggcccgtctg gtgctcgggc aagagcgcct cgccgacgat gaagggccgg cgcacgccga
     1741 tgatcacggg cgagccgtga tcgacgttcc agatgccgta cggcgtcagg aactggccga
     1801 cgcgcagcgt gaaggcgggg tggaacgtgt gttcgagcca cgcgcgttcg atcgagatgc
     1861 cgccccagcg cacgggccgg ccgagatcgg tataatcggc cacggtggta tcgatgcgcg
     1921 tcggtgcgct cccgttcgcc cccacgagcg gcgtcgtgcc gttcggcagg tacatgaacc
     1981 ggatttcgct gagggcacgc cagttgtcgc ccaggtcggc gcccgcatac aggttcaatt
     2041 tgccgacggc aaacgacgag tgggtttgcg cgtaatcgaa gcgcccgaag gtcgtcgaat
     2101 acgtgaagtc cgagaagccg tagaggttga gcttgaattc gctatcgctc gcggcgctct
     2161 cgctaccacc accaccggcc gctgctgccg ctgctgcggc tgctgcctcg gcgtccgcgt
     2221 cggcatcagc atccgacttc gccggagcgg ccgcggctgg agccgtggcc gccgcgggct
     2281 cgggtttagc cgccacgggc aacgcagccc ctgcgggagc ggcattcgtg ggctcggcgt
     2341 tgggcgaact tgcgggtgcc ggcgccgcgc tttcggctgg cgctggcgcg gccggcgcct
     2401 gagcgtgcgc ggagcgtgcg gacagcgcca gcaggaagac ggccggagct ataggagcga
     2461 agcgggtcaa tcgaagcgcg gtcatttcgg acaccctcct tcggcgacgc agatcggctg
     2521 ggggacgccg aaggcggaga gatcgcagca ctcggtgccg ctgaagcagt tgttggggct
     2581 aaccgtgcag ccctgaacca ggcaggcgtg tgtcacgaat aaatcgcagt acgtcgactc
     2641 cgtgcctgtg cagtccgcat ccgaggtgca ggccttcccc gtgccactcg gcggacgctc
     2701 acagaagctc tcggccgcgc tggtgttgca ggcgtagccg ccgctgcaat cctcggcggc
     2761 ggcgcacgcg ttcgtgcaat agccgctccc gtccgcgccc ggcgcgcaga caccgaaggt
     2821 cgggtcggcg cacggctcgc tcgtgctgca gggactcccg aggcccatgg gcacctccgc
     2881 gcatgcggca ccggcggccg gcttggcgta gcccgcctcg caggtacaac cagccggtcc
     2941 cggtagctcg tgttcgccgc agggcgtaca gccggtcgcc gagtaggcgc tagtcgcgtc
     3001 gcacacacaa cgtagggagt cgccgtacat cacctgatgt gggccgcaac gattcgatga
     3061 atcgtacaca cacccacccg gcagcactcc gaatacggcg aataacgccg ctatcctgcc
     3121 gtatctcgtc atcgacgcac caaaggcgcg gggaatattc atgtgacctc cacgaagctc
     3181 gtcattcgcc cgcagcgacc gggccttgga catcaacggt tcagcctacg cagagtttag
     3241 tcgacaatgc aacttcggct ctcggtccgg cccgatctca attcactgcg gtcaggcttg
     3301 cttcgagtct ggctttggca cgctggtatt cgtgctcgag ctcacccaag agctcggcgc
     3361 ggttcgccgg attgccctcg agctgcacgc acacactcgc catgcgcggc acgccgatgg
     3421 cgaggcagcc gcccttcagc cggtgcgcgg cttggcgcac gagctcggga tcacccgtcg
     3481 agatggcggc ttcgatcgcc tcgatgtcgc gcggtgcgtt cttcaaaaac agccgcgtca
     3541 cgcgctcgct gcgctgcacg ctcggatcga gcgcagagcc cggagctggg cccggccgag
     3601 cggcgttggc gaccttcgga gcggctttgg gcgcgggact cgcggtgtct accggccacc
     3661 agcgttcgag cgcctcggcg agtgcttgct ggctcacggg cttggagacg tagtcgtcca
     3721 tgcccgcggc gagcaccttg gcccgctcct cggcgagggc gtgggccgtg cacgcgatga
     3781 tgggcacgcg cctttcgccg ccctcgcgct ggcgaatttc agcggtggtc tggtagccgt
     3841 cgagcaccgg catctgacaa tccatcagga tcagcgggta cgcacgctgc tcgagcaatt
     3901 cgagagcgcg ctggccgttg tcggcgatgt cggcctcgta gccgagctct cgcaggatct
     3961 ccgtcatcac ttcctggttg atgggattgt cctcgacgac gagcacgcgg cgatcgtccg
     4021 ccggtccgcg cacgctcgaa atgttgagct tgcgcttgct gctctggtgc ttgggcgctt
     4081 cactcgagag caggcggccg atgcactgcg cgagatcgtc ggcgcgcacg ggcttttgca
     4141 tgaagccgtc gacgaagagc gccgcttctt ccggcagcga gtcctcgttt tgggaggtaa
     4201 ggaggacgat cacgggcttt cggtcgtgct cggcctcgag cacgcggcgc gcgagcgtga
     4261 gcccgtcgac gtccggcatg ttcatgtccg tgaccatcag gccgaagggt cggtcgtcgc
     4321 gcgcggcgac ggcgaggagc tcgagcgcgc tcttggcgtc cgacgcgctc gcgtgctcga
     4381 tgttccagct cgtcaagagc tcctcgagta cgaagcgatt cgtctcgttg tcgtcgacga
     4441 tcaacgtgcg taccttggcg tgcggcgtga gctcctcggc ggcatcgacc gccgcctcga
     4501 cgagcgggat ccaaaaccag aacgtgctgc ccttgccggg cacgctgtcg acgccgatct
     4561 cgccgccgag cagatgcacg agttgcttgg aaatcgcgag cccgaggccc gtcccgccgt
     4621 atttacgcgt gagggagccg tcgacctgcg agaaggcgcc gaacaggcga cccttcgctt
     4681 cctccggaat accgatgccc gtgtcggaga cttcgaagcg gaggataggc ttgccgtcac
     4741 gcgtctcgcg cagggcgcgg agcgcgacct gcccgcgctc ggtgaatttg acggcgttgc
     4801 cggccaggtt cgagagcacc tgtttgacgc ggtcgcgatc gaccagcatg tacgcgggca
     4861 gcgcgcgatc ggtgtggcaa acgagctcga cgcgtttcaa atgcgcgcgc gccgcgaaca
     4921 gctcgccgac ctcctcgagc aggtcgcgcg tcttggtcgg cacggggtgc agctcgatct
     4981 tgccggcctc gatcttcgag aaatcgagga tgtcgttcag cacggtcatg agcccgttgg
     5041 ccgaagcgtg cagcgtcttg gcgtagcgtt tctgtttttc gttgagctgc gtgccgtgca
     5101 agagctcgat catcccgagc acgccgttca tcggcgtgcg gatctcgtgg ctcatgtt
//
LOCUS       DATIML010001118         5168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3121912, whole genome shotgun sequence.
ACCESSION   DATIML010001118 DATIML010000000
VERSION     DATIML010001118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5168
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3121912"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VLJ38_19220"
     CDS             complement(<1..543)
                     /locus_tag="VLJ38_19220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41722.1"
                     /translation="MRERCHLAKIASFGVTLLATSVALGAPKKGEWLETNVLSSTLVS
                     RDFTTQTTTSVKDAVNLAAAVGLHYYFRDALRLGMSLQYTERLWPEPPPDASRFQRFA
                     FMPQLGWNFLDPFFVSTLFTYAPRTRGKAIPDLSISAMFGAALPITERVRLGVSVEVP
                     YAFYYHDVLSLVFLTGISVRL"
     gene            complement(664..1287)
                     /locus_tag="VLJ38_19225"
     CDS             complement(664..1287)
                     /locus_tag="VLJ38_19225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41723.1"
                     /translation="MTPASAIGANAPVVALAATTDDGALAELVAEYHDRVYRFGRRVC
                     RDGFDADDAVQDAFTKLARRPDVMADRSALSWLMSVVRRTCRRMLRPFWRQQRVLGEP
                     VEADAIAVDAMSPELAREKFELVHAVQTAIASLPAAYREVIILRDLEGLSGEETCGAL
                     GLELATMKSRLHRARALLRERIERDGALALDRRRAAHDASAVRADGT"
     gene            complement(1284..1496)
                     /locus_tag="VLJ38_19230"
     CDS             complement(1284..1496)
                     /locus_tag="VLJ38_19230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HSU41724.1"
                     /translation="MTKNVGLTDRVARGFAAAGLGLGAIFAPLPFWVRVAGLGLNTLY
                     LGYTALSGTCLGYRLMGRSTCPLEQR"
     gene            1689..2135
                     /locus_tag="VLJ38_19235"
     CDS             1689..2135
                     /locus_tag="VLJ38_19235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41725.1"
                     /translation="MAVDVVASEAVERPRLSLLLRAIFGACGAALLIGFFMPWFLAGA
                     LLSLSGFALVFSSGQMVGLLSGANRFLLFAVPLLGGLLVGGSILGHRLTTWVAVGGSA
                     MILLFGLFSLIRVFMTTTGVGMWLVIVSALLSLCCGLIHLGRGSAT"
     gene            2173..4380
                     /locus_tag="VLJ38_19240"
     CDS             2173..4380
                     /locus_tag="VLJ38_19240"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HSU41726.1"
                     /translation="MQGERIGDGRLGAGEAARLSGETRLFTRIAAAAGSPLGVLLLVP
                     GIVLAIGAWLTVLGHHSLEESSLALGLAQLRARNDMVGRQIGLALAQSDALLDRIRSL
                     ARVHTPDAPLSAVAFPLRDMLQGRAGVAYASISFPDGTFQGAYVHDDGSIRFQDSRVT
                     PDGTHVRRYGTDDRHGLVELSQERSSYDPRERGFYLLAAASPGAAWTAPYPFFKTHYT
                     GITRSEAVRAPDGGVSNVLTVDFDVNELSRYLERIPLDGSRILLYADDGTLLADPADA
                     ERIRALPAHAERTLQIRDLKDPVLDSFYAAQKSHSLADFVAGSRRFITNVASVGDPAL
                     GWHVASFVPEDILLEPARAYQRRARVVGLLSVLVAVGIAYLFSRHIVRMRRQTAEARA
                     AATRASAEAKELGSYRLSKRLGVGGMGEVWRAEHRLLARQAAIKLIRPDGDTGPEAQE
                     RFRREAQTLASLRSRNTIELFDYGITDDGTFFYVMELLDGMDLETLVARHGPQSPARV
                     CSLLIQACSSLAEAHASGLVHRDIKPANLYVCRQADEVDVLKVLDFGLVRSLSDAPSE
                     GRSLEELARELESGTLPLAKLTAAGAVMGTPDYMAPEQILGQDTDARADIYALGCVAY
                     FALTGVLPFRGRDGMAIMMAHLTEQAPPLASRTEQPLPARLVEIVTSCMAKEASRRPP
                     SASVIRQELGRVEFEAGGAWTEEDAADWWDAHVPRLVSISPSAGPLSPRSHVA"
     gene            complement(4409..>5168)
                     /locus_tag="VLJ38_19245"
     CDS             complement(4409..>5168)
                     /locus_tag="VLJ38_19245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41727.1"
                     /translation="DCFKLKVGKVYKQLGLFWDNSFYGNIQVYEGLKFDPNAGASLEG
                     KLGERVGLAFWAQYFVIDGHTNASLSGRDTISIPGARRRNTVTGRVAPFARLSPKARL
                     ELGLSGEHFTADLPTAKHSVWRGAVDAKLTWGGLAFWGEVLHQSGANVDAFPYPAEPS
                     AKPPLAGRASAHNTYLLAGAEYALGPVVARYDLSLVRYSDVSVEEVLHLPGLGVTFNE
                     NTSFLAEYAWWQRYAPEGSSQVDRSVNLTWMGHF"
BASE COUNT          862 a         1789 c         1685 g          832 t
ORIGIN      
        1 cagccgcacg gagatgcccg tcaggaacac gaggctcagc acgtcgtgat agtagaacgc
       61 gtacggcact tcgaccgaga caccgagacg cactcgttcg gtgatcggta gggccgcacc
      121 gaacatggcc gaaatcgaca ggtcggggat agccttgccg cgcgtccgtg gcgcgtacgt
      181 gaacaaggtc gagacgaaga acggatccag gaagttccag ccgagctgcg gcatgaacgc
      241 gaagcgctga aaacgactcg cgtcgggcgg cggctcgggc cacagacgct cggtgtactg
      301 aagactcatg ccgagccgca gcgcgtctct gaaatagtaa tgaaggccga cggcggcggc
      361 gagatttacg gcgtccttga cgctcgtcgt cgtctgggtc gtgaagtcgc ggctcacgag
      421 cgtcgagctc aagacgttcg tctcgagcca ctcgcccttt ttgggtgcgc cgagcgcgac
      481 gctcgtggcg agcagcgtca ccccaaagct ggcgattttg gccaaatgac agcgctcgcg
      541 cacgccgctg cgtgacgaag aaccgccgct cccgacacgc ggagggcgaa gcaccgaggt
      601 aggcttttgt gcgaacggca gagacagcac cgttcctgct aacgtccact cacacccccg
      661 aggttaagtg ccgtcggcgc ggacggcgga cgcatcgtga gccgcgcgcc ggcggtcgag
      721 cgcgagcgcg ccgtcacgct cgatccgctc gcgcaggagc gcccgtgcgc gatgtaaacg
      781 acttttcatc gtcgcgagct cgagcccgag cgcgccgcac gtctcctcgc ccgagagtcc
      841 ctcgagatcc cgcaggatga tcacctcgcg ataagcggcc ggcagactcg cgatcgccgt
      901 ttgcaccgca tgcacgagct cgaatttctc gcgcgcgagc tcggggctca tcgcgtcgac
      961 ggcgatggcg tcggcttcga cgggctcacc gagcacgcgc tgctgacgcc aaaaagggcg
     1021 cagcatgcgc cggcacgttc ggcgcaccac cgacatcaac cacgaaagcg cgctgcggtc
     1081 tgccatcacg tcgggacgcc gcgcgagctt cgtgaacgcg tcctgcacgg cgtcgtcggc
     1141 atcgaagccg tcacgacaca ctcgccgccc gaagcgatac acccgatcgt ggtactcggc
     1201 gacgagctcc gcgagcgcgc catcgtccgt agtggccgct agagcgacga ctggcgcgtt
     1261 cgcgccgatc gccgacgcgg gcgtcatcgc tgctcgagcg gacaagtgga tctgcccatc
     1321 aggcgataac cgaggcacgt gccgctcaac gcagtgtagc ccagataaag ggtattcagt
     1381 cccaggcctg ccactcggac ccaaaagggc agcggcgcaa aaatcgcgcc gaggcccagg
     1441 cctgccgccg cgaagccgcg cgcaacgcga tccgttagtc ccacgttctt cgtcatgtga
     1501 gtcgttcctt tcgagacgga gaaggcgcgg cggaggacaa aggattcgaa aaaaatgcgc
     1561 gcgccgaacg gttcgcgcgc atcgcctgct gctccgtgga aaaagcgcgg aacgggagcg
     1621 cgcccggccg gaacgcccgt gaagttcacg agccaccgcg cgcggcagat cgtgctagcg
     1681 tccgcgaaat ggcggttgac gttgtcgcgt cggaggcggt ggagcggcct cggctcagcc
     1741 tgctcctacg cgcgattttt ggagcgtgtg gtgcggcgct gctcataggc ttcttcatgc
     1801 cgtggttttt ggcgggggcg ttgctctcgc tcagcggctt cgcgctcgtg ttctcgagcg
     1861 gacagatggt gggcttgctc tcgggcgcga atcggttctt gctgttcgcg gtgccgctgc
     1921 tcggcgggct cctggtcggc ggtagcatcc tcgggcatcg cttgaccacc tgggtggccg
     1981 tgggcggctc ggcgatgatt cttctgtttg gactcttttc gctgattcga gtcttcatga
     2041 cgacgaccgg agtcggcatg tggctcgtga tcgtctccgc gctgttatcg ctctgctgcg
     2101 gcttgatcca cctgggcaga ggcagcgcaa cctaacgaaa cggcgccgcg cgcgcgggac
     2161 ggcgagaccg gcatgcaagg agagcgcatc ggagacggac ggctcggcgc cggcgaggcg
     2221 gcgaggctgt cgggcgaaac gcggctgttc acgcgcatcg cggccgccgc cggctcgccg
     2281 ctcggcgtgc tcttgctcgt cccgggtatc gtgctcgcga tcggcgcgtg gctcaccgtg
     2341 ctcggccacc actcgctcga ggagagctca ctcgcgctcg ggctcgcgca gctccgggcg
     2401 cgcaacgaca tggtcggccg acaaatcggc cttgccctcg cgcagtccga cgcgctgctc
     2461 gatcgcatcc gctcgctcgc acgcgtgcac acgcccgacg cgccgctctc agccgtcgcg
     2521 ttccccctgc gcgacatgct gcagggccgc gccggcgtcg cctacgcgag catcagcttt
     2581 ccggatggca cctttcaggg cgcctacgtg cacgacgacg gcagcattcg ttttcaagac
     2641 agccgcgtca cccccgacgg cacgcacgtg cgccgctacg gcaccgatga tcgccacggc
     2701 ctcgtcgagc tcagccaaga acgttcgagc tacgatccgc gcgagcgcgg cttttatttg
     2761 cttgcggccg cgagcccggg tgccgcctgg actgcaccct acccgttctt caagacgcac
     2821 tacaccggca tcacgcgaag cgaggccgtg cgcgcgccgg acggtggcgt gagcaacgtg
     2881 ctcaccgtcg atttcgacgt gaacgagctc tcgcgctacc tcgagcgcat cccactcgac
     2941 ggctcgcgca tcttgctcta cgcggacgac ggcacgctgc tcgccgatcc cgccgacgcc
     3001 gaacgcatcc gcgcgctgcc agcgcacgcc gagcgcacgc tccagatccg cgatctgaag
     3061 gaccccgtgc tcgactcgtt ctacgcggcg caaaaatcgc acagtttggc cgatttcgtc
     3121 gcgggcagcc gccgtttcat cacgaacgtc gcgagcgtcg gcgacccggc gctcggctgg
     3181 cacgtcgcgt cgttcgtgcc cgaggacatc ctgctcgagc cggcacgtgc ctaccagcgc
     3241 cgggcccgcg tcgtcggcct cttatcggtg ctggtcgccg tcggcatcgc atacttgttc
     3301 tcgcgccaca tcgtacgcat gcgacgccag accgccgaag cgcgcgctgc cgcgacgcgc
     3361 gcctccgccg aagccaagga gctcggtagc taccgcctgt cgaagcgcct cggcgtcggc
     3421 ggcatggggg aagtgtggcg cgcggaacat cggctgctcg ctcgccaagc cgccatcaag
     3481 ctcattcgcc ccgacggcga cacgggcccc gaagcccagg agcgcttccg ccgcgaagct
     3541 cagacgctcg ccagcttgcg ctctcgcaac accatcgagc tcttcgacta cggcatcacc
     3601 gacgacggca cgttcttcta cgtgatggag ctgctcgacg gcatggacct cgagacgctc
     3661 gtcgcgcgcc acggcccgca atcccccgcg cgcgtgtgct cactcctgat ccaggcttgt
     3721 agctcactcg ccgaggcgca cgcgtccgga ctcgtccatc gcgacatcaa gccggcaaac
     3781 ctgtacgttt gccgccaagc cgacgaagtg gacgtgctca aggtcctgga tttcggcctc
     3841 gtgcgctcac tctccgacgc gccgagcgaa ggccgctcgc tcgaggagct cgcgcgcgag
     3901 ctcgaatccg gcacgctgcc gctcgcgaag ctcaccgccg cgggcgccgt catgggcacg
     3961 cccgactaca tggcgcccga gcaaatcctg gggcaagaca cggacgcgcg cgccgacatc
     4021 tacgcgctcg gctgcgtcgc gtatttcgcc ctcactggcg tcttgccgtt tcgcggccgc
     4081 gacgggatgg cgatcatgat ggcgcacctc accgagcaag cgccgccgct cgcttcacgc
     4141 accgagcagc cgttgccggc tcggctcgtc gaaatcgtga cgagctgcat ggcgaaggaa
     4201 gcgtcccgcc gtccgccatc ggccagcgtg atccggcaag agctcgggcg cgtcgaattc
     4261 gaggccggcg gcgcctggac ggaagaagac gcggcggact ggtgggacgc gcacgtgcca
     4321 cgcctggtct cgatctcacc gagcgcaggc ccgctctcgc cgcgcagtca cgtcgcctga
     4381 cgcacgtccg cgaccgggcc gtacgtcgtc agaagtgacc catccacgtg aggttcacgc
     4441 tgcggtcgac ctgtgacgag ccctcgggcg cgtagcgctg ccaccaggcg tattcggcga
     4501 gaaatgaagt attttcgttg aacgtcacgc cgagcccggg caaatggagc acctcctcga
     4561 cgctcacgtc ggagtagcgc acgaggctca gatcgtagcg cgctacgacg ggcccgagcg
     4621 cgtactcggc gcccgcgagc aagtacgtgt tgtgcgccga cgcgcgcccc gctagcggcg
     4681 gcttcgcgct cggttcggcg ggatacggaa acgcatcgac gttcgcgccg gactggtgca
     4741 agacctcgcc ccaaaatgcg agcccgcccc aagtgagctt ggcgtcgacg gcaccacgcc
     4801 acacggagtg cttggccgtc ggcagatcgg cggtgaagtg ctcgcccgac aggccgagct
     4861 cgagccgcgc cttgggcgac agccgtgcaa agggcgcgac gcgacccgtg accgtgttcc
     4921 gccggcgcgc gccggggatc gaaatcgtgt cacgcccgct gagcgacgcg ttcgtgtgtc
     4981 cgtcgatcac gaagtactgc gcccaaaacg cgagaccgac gcgttcgccg agcttacctt
     5041 cgagcgacgc acccgcgttc ggatcgaatt tgagaccttc gtacacttga atgttgccgt
     5101 aaaaggagtt gtcccaaaat aggccgagct gtttgtagac cttgccgacc ttcagcttga
     5161 agcagtcg
//
LOCUS       DATIML010001119         4120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2253418, whole genome shotgun sequence.
ACCESSION   DATIML010001119 DATIML010000000
VERSION     DATIML010001119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4120
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2253418"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VLJ38_19250"
     CDS             complement(<1..265)
                     /locus_tag="VLJ38_19250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HSU41728.1"
                     /translation="MALNVDLLRSSFALVVEREPEVTHRFYEVLFTKYPQVKPLFGRR
                     SSADQERMLRDMLVAIVDHVDDGAWLQNQMAALGSKHVEYGVSP"
     gene            complement(414..1835)
                     /locus_tag="VLJ38_19255"
     CDS             complement(414..1835)
                     /locus_tag="VLJ38_19255"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41729.1"
                     /translation="MQLTHGFPPATGSLIDGKYVVTGFVGSGGTGVVLAARHRDLGHL
                     VAIKLLHPELASSSEVVTRFLREARAMSRLKSEHVVGVIDVERLPNGIPYFVMEHLTG
                     SDLSTRLAERGPLPIEDLVDYVLQALEALAEAHRRGIVHRDLKPSNLWLTTREDDSAF
                     VKVLDFGTSKIARSELTANEPPLTRSGSLLGSPLYMAPEQIRSARLADARSDIWSLGV
                     VMHELLTGHPPFRGQFLGEMISAVCSDAYALPAREDLPAELAEILMKCLQKQPELRYQ
                     SAAELARAFQPLVRTASSQVSIDRILRVPSSAPPPLADVVTVDALGAGPISLTDTLER
                     PTSLAPHAELGDSRATRSQRSSLTALAFVALGAAGAFTWLRLERALPGHAVGATPTPA
                     AATARPTPSQNEPKLAATAAPAPGREPRNLPLRRRTLGARSVPASSARPPTNERADDA
                     KPTPGTLTPETRTLDGENPFGHR"
     gene            complement(1835..4072)
                     /locus_tag="VLJ38_19260"
     CDS             complement(1835..4072)
                     /locus_tag="VLJ38_19260"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HSU41730.1"
                     /translation="MKCLLVTAGFLALACAAPPKHVPFGPPVPPIEGAESASQKAEAA
                     PFVNPGGLFMPEQMPAQTDALKKLGLKLEPALLADPLSDLLSAIVNLGGCSASFISSD
                     GLIATNHHCAVTSLQYNSTPAENLLRDGFLARSTSEERFAGPTQRVFITRTLRDVSTA
                     VQGALAATKDDLARERALEKYEKEAVAACEKPGGGTRCELKSFYGGRRYYLIEKLELR
                     DVRLVFAPPAGIGNYGGEIDNWRWPRHTGDFSLFRAYVGKDGHAADHAADNVPYRPAH
                     HLELADEPLATGDLAIVAGYPGRTSRLAVAKEVADTIEWTYPRRIAMFDAYIAAIEAV
                     TANDPDAKIKGVGFVRRFNNFRTKHLGELEGFKKFGLLEKKRADEASLRAFIAAEPER
                     EKNYGAALPAIDAAITERDRTREQDTALQAEILLPRLLAAATLIVRMAEERTKPDAER
                     DPDYQERKVPDLRDELDALDKRYHPKIDQAMLTLALERVAKTEPAERTPALALIAGTD
                     TSPEHLKSVVAKLYATTELADAKRRRALFDHATPAELARSRDPLIRLGVKMRPLLRET
                     EERADRFTGKLLLAEPMYMAALLAQKGELVPPDANGTLRLSYGVIKGPPSGGAAFTWL
                     DEVVRKNRGEEPFDAPKMLLEAAKAKRFGTYADPVKHDVPVDFMTDLEITNGNSGSAT
                     LDASGRLIGLAFDGTYESVASDWMFLPSTRSIHVDTRYLLWVLDELEHADWLLREIGA
                     NPRPR"
BASE COUNT          619 a         1321 c         1466 g          714 t
ORIGIN      
        1 cggggctcac gccgtactcg acgtgcttcg agccgagggc ggccatttgg ttttggagcc
       61 acgcgccgtc atcgacgtga tcgacgatcg cgacgagcat gtcgcgcagc atgcgctcct
      121 ggtcggcgga actgcgccgg ccgaacagcg gcttcacttg cggatacttc gtgaagagca
      181 cttcgtagaa acggtgcgtc acttccggtt cgcgctcgac gaccaatgcg aaactcgatc
      241 tcaagaggtc gacattcagg gccatggtgt cctcctcccg cgcggtgcgc ggtcgtcgtg
      301 ggcgtcgctc gtcccttggg cgacatctca gagtaacccg acagggtcac cctcgggaag
      361 tcgccgcgtg ctgaacgcag cgcgtcgtaa cgcggccggc gacgtcgaaa cgcttatcga
      421 tgcccgaacg gattttctcc gtcgagcgtc cgagtttccg gcgtgagcgt gcctggagtc
      481 ggcttggcgt cgtccgcgcg ctcgttcgtg gggggacgtg ccgagctcgc ggggacggag
      541 cgcgccccca acgtacggcg acgcagcggt aaattccggg gctcgcgtcc cggcgctggc
      601 gcggccgttg cggccaattt cggctcgttt tgagacggcg tgggccgcgc cgttgcggcg
      661 gccggggtgg gcgtcgcgcc tacagcgtgt cccggcagcg cgcgctcgag gcgcagccac
      721 gtgaaggcac ccgccgcgcc gagcgcgaca aatgccagtg ccgtgagcga gctccgttgc
      781 gaacgcgtcg cgcgcgagtc accgagctcc gcatggggcg cgagcgaggt cggacgctcg
      841 agcgtgtcgg tgagggagat ggggccagcg ccgagtgcat cgactgtgac cacgtcggcc
      901 aggggcggcg gcgcgctgct cggcacgcgc aaaatgcgat cgatcgagac ttgagacgag
      961 gccgtgcgca cgagcggctg gaaagcgcgc gcgagctccg ccgcggactg gtaacgcaac
     1021 tcaggctgct tctgcaggca tttcatcaag atttcggcga gctccgccgg caagtcctca
     1081 cgcgcgggca gtgcgtaagc gtcgctgcac acggcgctga tcatctcccc caaaaactgc
     1141 cctcgaaacg gcgggtgccc cgtcaaaagc tcgtgcatca cgacgcccag cgaccagata
     1201 tcgctgcgcg cgtccgcgag cctcgcgctc cggatttgct ccggggccat gtagagcggc
     1261 gaaccgagca gcgagcccga gcgggtgagc ggaggctcgt tggcggtgag ctcgctgcgc
     1321 gcgatcttcg acgtgccgaa gtcgagtacc ttgacgaagg cgctgtcgtc ctcgcgcgtc
     1381 gtgagccaca ggttcgacgg cttgagatcg cggtgcacga tgccgcgacg gtgtgcttcg
     1441 gcgagcgctt cgagagcttg aagcacgtaa tcgaccaggt cttcgatcgg aagcggcccg
     1501 cgctcggcga gccgcgtgct gagatccgag cccgtgaggt gctccatcac gaaataggga
     1561 atgccgttcg gcagccgttc gacgtcgatg acgccgacga cgtgctcgct cttgagccgg
     1621 ctcatggcac gcgcctcgcg cagaaagcgg gtgaccactt cgctcgagct cgcaagctcg
     1681 gggtggagca gcttgatggc caccaaatgc ccgagatcgc ggtgccgcgc cgcgagtacg
     1741 acccccgtgc cgccgctgcc gacgaagccg gtcacgacgt acttgccgtc gattagactg
     1801 cccgtggccg gcggaaagcc gtgcgtgagc tgcatcagcg aggacgtggg ttagcgccga
     1861 tctcgcgcag cagccagtcg gcgtgctcga gctcgtccag cacccagagc aggtagcggg
     1921 tatccacgtg gatgctgcgc gtgctcggta gaaacatcca atccgacgcg acggattcgt
     1981 aagtgccgtc gaaggcgagc ccgatcaatc ggccgctcgc gtcgagcgtc gccgagcccg
     2041 aattgccgtt cgtgatctcg aggtccgtca tgaaatcgac gggcacgtcg tgcttcaccg
     2101 ggtcggcgta cgtcccgaag cgcttcgcct tggcggcctc gagcagcatt ttcggcgcgt
     2161 cgaacggctc ttccccgcgg ttcttccgca cgacctcgtc gagccaagtg aaggccgcgc
     2221 cgccactcgg cgggcccttg atcacgccgt agctcagccg cagcgtgccg ttcgcgtcgg
     2281 gcggcacgag ctctcccttt tgcgccagca gcgcggccat gtacatcggc tcggcgagca
     2341 gcagcttgcc cgtgaagcga tccgcgcgct cctcggtctc gcgcaggagc ggccgcatct
     2401 tcacgccgag gcggatgagc gggtcgcgac tcctggcgag ctcggcgggc gtcgcgtggt
     2461 cgaacagcgc gcggcggcgc ttggcgtcgg cgagctcggt cgtggcgtag agtttggcga
     2521 cgacgctctt caagtgctcg gggctcgtgt ccgttcctgc gatgagcgcc agggccggcg
     2581 tgcgctcggc gggctcggtt ttggccacgc gctcgagcgc gagcgtgagc atcgcctggt
     2641 cgatcttcgg gtggtagcgc ttgtcgagcg cgtcgagctc gtccctgaga tcggggacct
     2701 tgcgttcctg gtagtccggg tcgcgctcgg cgtcgggctt ggtgcgctcc tcggccatgc
     2761 gcacgatgag cgtcgccgca gccagcaagc gcggcagcag gatttcggct tgcagcgccg
     2821 tgtcctgctc gcgcgtgcgg tcacgttcgg tgatcgcggc gtcgatcgcc gggagcgccg
     2881 cgccgtagtt cttttcgcgc tcgggctcgg cggcgatgaa ggcgcggagc gaggcttcgt
     2941 cggcgcgctt cttctcgagc aagccgaact tcttgaagcc ctcgagctcg cccaggtgct
     3001 tggtacggaa attgttgaag cgacgtacga agccgacgcc tttgattttt gcgtcggggt
     3061 cgttcgccgt gacggcttcg atcgcggcga tgtacgcgtc gaacatcgcg atgcgccgtg
     3121 ggtacgtcca ctcgatcgtg tcggcgactt ctttcgcgac tgcgagccgc gaggtgcggc
     3181 cggggtaacc cgcgacgatc gcgaggtcgc ccgtagcgag cggctcgtcg gcgagctcga
     3241 ggtgatgcgc ggggcggtac ggcacgttgt ccgccgcgtg atcggcggcg tggccgtcct
     3301 tgccgacgta ggcgcgaaac agcgaaaaat ccccggtgtg acgcggccag cgccagttgt
     3361 ctatttcacc gccgtaattg ccgatgccgg cgggcggagc gaagacgagc cgcacgtcac
     3421 ggagctcgag cttctcgatc aagtagtaac ggcgcccgcc gtagaagctc ttgagctcgc
     3481 agcgtgtgcc gccccccggc ttctcgcacg cggccaccgc ctccttctcg tacttctcga
     3541 gcgcgcgttc acgagcgagg tcgtctttgg tggcggcgag cgcgccctgc acggccgtcg
     3601 aaacgtcgcg caaggtgcgc gtgatgaaca cgcgctgggt cgggcccgcg aagcgctctt
     3661 cgctcgtcga gcgagcgagg aagccgtcac ggagcagatt ctcggcgggc gtcgagttgt
     3721 actggagcga ggtgacggcg cagtgatggt tcgtcgcgat gagcccgtcg ctcgagatga
     3781 aagacgccga gcagccgccg aggttcacga tggcggagag caggtccgag agcgggtcgg
     3841 caagcagcgc cggctcgagc ttgagcccga gcttcttcaa ggcatccgtt tgcgccggca
     3901 tctgctccgg catgaagagc ccgcccggat tgacgaacgg cgcggcctcg gccttctggc
     3961 ttgcggattc ggctccctcg atcgggggaa cgggcggacc gaagggcacg tgtttcgggg
     4021 gcgcggcgca cgcgagcgcc aagaagccgg cggtgacgag caagcatttc atcggattta
     4081 cgtttccgcg cagtggcggg gcgactttcg ttccgtggct
//
LOCUS       DATIML010001120         9354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1972132, whole genome shotgun sequence.
ACCESSION   DATIML010001120 DATIML010000000
VERSION     DATIML010001120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 9354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9354
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1972132"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..832
                     /locus_tag="VLJ38_19265"
     CDS             119..832
                     /locus_tag="VLJ38_19265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU41731.1"
                     /translation="MLRVDLAGRIGPLLLEASFDTSRGPVVLTGPNGSGKTSLLLMIL
                     GVIAPERGEVSLDGTPLFDAQAGVNLAVEERAIGYVPQHYGLFPHLTAAQNVEFSLEC
                     QKPAPPRAERRERARSLLAELGLAGLAEQRPHALSAGERQRVALARAFASSPKALLLD
                     EPFAALDIGTRRQVRVFLRDYLERLSLPTIVVSHDAEDARAVGRHIAVLEAGRVVQSG
                     SWQELSMSPATAFVRELTL"
     gene            complement(919..2898)
                     /gene="nadE"
                     /locus_tag="VLJ38_19270"
     CDS             complement(919..2898)
                     /gene="nadE"
                     /locus_tag="VLJ38_19270"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF014586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HSU41732.1"
                     /translation="MRLLKVAAAALNQTPLAWAVNQGNIVAAIRSARAAGVGILCLPE
                     LCITGYGCEDAFLAPFVRETALDLLTEVLPETRGMVVSFGLPLQHAKAVFNACALAAD
                     GRLLGFVAKRSLAGDGIHYEPRWFKPWPAGTRTHVEVRGEELPLGDYVFEVGGVRIGF
                     EICEDAWAAKRPGAELSLDAVDVILNPSASHFAFGKHEVRKRLVLEGSRAFGVAYVYS
                     NLLGNEAGRAIYDGDALIAAGGALVGKAPRFSLRSVELATAVVDLDLGDVRQGALSSY
                     QPNLSDVADARVKVPFNYPPATSPSRPLEESGWEKGPYAKEEELTRALTLGLFDYLRK
                     TSSRGFVVSLSGGADSALVACLVAMMARLALAALGADGLVERLPFLPPECPATPEALV
                     GRLLTTAYQATAHSSETTRRAAREVATALGARHLELDVEELVRGYRNRIEAALGSTFD
                     WEQHDTALQNIQARVRAPSVWLIANVERALLLATSNRSEAAVGYATMDGDTAGGLSPI
                     AGVDKNFVRSYLRWLEREGPVGLGPIPALRAVNEQAPTAELRPPSAEQTDERDLMPYD
                     VLDAIERAAIRDKRSPREILGQLGVEFPAHARATLVVWVRRFFRLFAQNQWKRERYAP
                     SFHVDDESLDPKTWYRFPILSGGFERELAELDRDD"
     gene            2900..3382
                     /locus_tag="VLJ38_19275"
     CDS             2900..3382
                     /locus_tag="VLJ38_19275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41733.1"
                     /translation="MLISYHVLVHGAYRRLRRGKGVLSRAEPNMHSLSLISWFGARAA
                     WTLFAGVALSGCMSSNDIQCHVSTAPAQAPADGTVTYHAAISGDAHIDSIIYKTDAGP
                     QTVSHPPLPFELDAAVTSGTPLGIIATGWMEEGANIVAGYTFVDALGASPDTASASCR
                     "
     gene            complement(3779..4825)
                     /locus_tag="VLJ38_19280"
     CDS             complement(3779..4825)
                     /locus_tag="VLJ38_19280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41734.1"
                     /translation="MQRVKSAIILTLLATAVLRCGDDDDTTGAGGKGGKGGAAGKGAS
                     AGKGGSAGAKAGSGGSSTAGKGGSGTGGSSGTGARAGSGGTGVAGTGVAGSGTGGTGV
                     GGTTEPGGGQGGELAGAGGEGGGGQGGEAPSTGGMTANGGHGGAGTSGASGHAGVSGS
                     GGAGPTFADVRAVFNARCGSCHNGAGAALTRVKLTDIPPSAGGAGAGGVSGGGGVSTG
                     GGGASAGGGAGGTSGVTPLTDAQLYANLTQPMPLGTQTCSGDTLVVPSNLAASFIITK
                     LTVDGPICGGTGGSSGSSGNGGNGSVATKRMPLGCGPGTAGGGGASATDPSKCLTSDQ
                     LATIENWISDGAPH"
     gene            5038..5952
                     /gene="grxD"
                     /locus_tag="VLJ38_19285"
     CDS             5038..5952
                     /gene="grxD"
                     /locus_tag="VLJ38_19285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HSU41735.1"
                     /translation="MTPNTRANITQLLQQNPVVLYMKGTRAAPQCGFSARVVEILDGL
                     LTDYQTVDVLGDPDLREGIKQFSSWPTIPQLYVRGEFVGGSDIVTALYESGELADKLG
                     DLVSVHTPHITVTDAARAELAQALEGANECIRLDVSPTFEHDLAVGVPDPKDLLIDAG
                     GIRVSLPRGTAARADGIRIDLVQTPEGPAFKIDNPNEPARVKRLSPAELHARLTRGDD
                     LLLVDVRTPEEREIAQIHGSRPLDAALHDEIGKGSRERSIVVYCHHGSRSQRAAEELA
                     QQGFRDVYNLVGGINAWSMDVDPDVPMY"
     gene            complement(5979..7895)
                     /locus_tag="VLJ38_19290"
     CDS             complement(5979..7895)
                     /locus_tag="VLJ38_19290"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41736.1"
                     /translation="MSDATVVETDPQVGRVLADRYRIVKLLGSGGMGSVYRAEHVHMK
                     KPVAVKILHRHMTTNAEVVARFEQEAVAAGRIEHPNVAAATDFGKLEDGSFYLALEYV
                     EGKSLGDVIDQGPLSPYRALVVARQIAEALGAAHAAGIVHRDLKPDNVLLVERDGLAD
                     FVKVLDFGIAKLHVDEGSGHKPLTQIGTIFGTPQYMSPEQGQGRPVDGRSDLYALGIM
                     LYEMLSGKLPFDADDLVVLITRQVMEAPPPLPDSIPAPVRALTAQLLEKKPEARVQSA
                     AELVERIDELLGELASSSRAPGVSRRASAAGRTSAERRFSQARSGERPLAAATRSLDG
                     ALAALRAGFVAAERTLVRRVPALGRSVTLGGTTLPLFALLGGGLALALLGALLAVLVV
                     PSRASKHRGADALGTAQGPATSDEARHGALVSRALTGDPRALAELDALPSKQRTLDDA
                     RALGHGRCAVGEWAACMAAYRTSMQSFTALRQDPVLLADVYRGAFEPAASEEALRLAA
                     HQLGEKGLDLLWDVWQSSRQKPELQSVNRRARQFLDDTAVREHASRELSLVFDVERAE
                     KRHRCADAKALLSKVAEYGDDRLLPLLDRFKLTRGCGFVDLADCWECLRGNKDVATAR
                     AAAAGRHGPSFGGE"
     gene            8148..8936
                     /locus_tag="VLJ38_19295"
     CDS             8148..8936
                     /locus_tag="VLJ38_19295"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU41737.1"
                     /translation="MSDGFETIELVPAKQRRSRLGCLGWILLLLVLGAVAALVKYVYL
                     PLRAERARLEQQVHDAAEREKGLQKSLSDAQAHATELSTSREQLSGKLAETEAEREKL
                     EGELKRVQNELSAILQPEISAGNIRIRRRGNELVVDVSDQVLFDSGHADVSEGGQKVL
                     AEVAPSLARLKGYTIQVAGHTDRTRVVNPETRERFPTNWELSTARATNVVRYLEERGK
                     IPGTRLEAAGFAEFRPVAGNATAEERQKNRRIELVLIPAGAPSQ"
     gene            9090..>9354
                     /locus_tag="VLJ38_19300"
     CDS             9090..>9354
                     /locus_tag="VLJ38_19300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41738.1"
                     /translation="MTLASTLVLGSGCAETVSKAARTAAPAAVEGSVKSARDPATHDT
                     IADMLSDPQIRGATAQMSQAMMDGILNSITEKERLAGAESASDA"
BASE COUNT         1493 a         3322 c         3079 g         1460 t
ORIGIN      
        1 gcgatcccag cgcggcccgt gcgctcgcac tcgtgctggt cgtcgtcgcc ttcgcgctgc
       61 tcgtcgccgt ccggagcgcc gaacgctcga gcacccgacg cggctcggag cgcgactgat
      121 gctccgcgtc gacctcgcgg gccgcatcgg tccgctccta ctcgaagcca gcttcgatac
      181 gagccggggc ccggtcgtgc tcacggggcc gaacggttcg ggcaagacta gtctcctgct
      241 catgatcctc ggcgtcatcg cgcccgagcg cggcgaggtc agcctcgacg gcacgccgtt
      301 gttcgacgcg caagcgggcg tgaacctcgc cgtcgaagag cgcgcgatcg gctacgtccc
      361 gcagcattac ggcttgttcc ctcacctcac cgccgcgcaa aacgtggaat tttcactcga
      421 gtgccaaaaa cccgcgccgc cgcgggccga acggcgcgaa cgggctcgct ccctgctcgc
      481 tgagctcggc ctcgccggac tcgccgagca gcggccacac gcgctctcgg cgggtgaacg
      541 ccagcgcgtc gcgctcgcac gggcgttcgc gtcgtcgccc aaggcgcttt tgctcgacga
      601 gccgttcgcg gcgctcgaca tcgggacccg ccggcaggtg cgcgtgttcc tgcgcgacta
      661 cctcgagcgg ctctcgctac cgaccatcgt cgtgagccac gacgccgagg acgcgcgcgc
      721 cgtgggacgg cacatcgcgg tgctcgaagc cggccgcgtc gtccagagcg gcagctggca
      781 agagctctcg atgagcccgg cgactgcgtt cgtgcgcgag ctcacgctct agcctcgagt
      841 tgagcggtct tggaagacca gatcacgatc gcgatctttt cttccaagac cgccgaagtc
      901 gagtctagca gccgcagctc aatcgtctcg gtcgagctcg gcgagctcgc gctcgaagcc
      961 acccgacagg attggaaagc gataccaggt cttcggatcg aggctctcgt cgtcgacgtg
     1021 gaagctcggc gcgtagcgct cgcgtttcca ctgattttgc gcaaacagcc gaaaaaaacg
     1081 ccggacccac acgacgagcg tcgcgcgcgc gtgggccggg aattcgacgc cgagctgccc
     1141 caggatttcc cgcggggaac gcttgtcgcg aatcgccgcg cgctcgatcg cgtcgagcac
     1201 gtcgtacggc atcaggtcgc gctcgtcggt ttgttccgcg ctcggggggc gaagctcggc
     1261 cgtgggcgct tgctcgttga ccgcgcggag cgccgggatc ggcccgagcc cgaccggacc
     1321 ttcgcgctcg agccagcgca ggtacgaacg cacgaagttc ttgtcgacgc cggcaatcgg
     1381 gctcaagccg cccgcggtgt cgccgtccat cgtcgcgtag ccgaccgcag cttccgagcg
     1441 gttgctcgtc gcgagcaaga gggcgcgctc gacgttggcg atgagccaga cgctcggcgc
     1501 gcgcacgcgt gcctggatgt tttggagcgc ggtgtcgtgc tgctcccaat cgaaggtcga
     1561 gccgagcgca gcttcgatgc ggttccgata gccgcgcacg agctcttcga cgtcgagctc
     1621 gaggtggcgc gcgccgagcg ccgtcgcaac ttcccgcgca gcgcgtcgcg tggtctcgga
     1681 gctgtgcgct gtcgcttggt aggcggtcgt gagcagacgt ccgacgagcg cctcgggcgt
     1741 cgccgggcat tcgggcggaa gaaacggcag ccgttcgacg agcccgtccg cgcccaaagc
     1801 cgcgagcgcg aggcgcgcca tcatggcgac gaggcaggcg acgagggccg aatcggcgcc
     1861 tccgctcagc gagacgacga aaccgcgcga gctcgtcttg cgcaggtagt cgaagagtcc
     1921 gagcgtgagc gcgcgcgtga gctcctcttc tttcgcgtag ggacccttct cccacccgct
     1981 ctcttcgagc gggcggctcg ggctcgtggc cggcgggtag ttgaatggga ctttgacgcg
     2041 cgcgtcggcc acgtcgctca ggttcggctg atagctcgag agcgctccct ggcgtacgtc
     2101 gccgagatcg aggtcgacca cggccgtcgc gagctcgacc gagcgcagcg agaaacgcgg
     2161 cgccttgccg acgagcgcgc cgccggcggc gatcagcgcg tcaccgtcgt aaatggcgcg
     2221 cccggcttcg ttgccgagca gattcgagta cacgtacgcg acgccgaacg cgcgcgagcc
     2281 ttcgagcacg agcctttttc gcacctcatg cttcccgaac gcgaaatggc tcgcgctcgg
     2341 gttcaggatc acgtcgacgg cgtcgaggga cagctcggcg cccggacgct tggccgccca
     2401 ggcgtcttcg caaatttcga agccgatgcg cacgccgccc acctcgaaca cgtaatcgcc
     2461 gagtggaagc tcctcgcccc gcacctcgac gtgcgtgcgc gtcccggcgg gccagggttt
     2521 gaaccagcgc ggctcgtagt gaatgccgtc gcccgcgagc gagcgtttgg cgacgaagcc
     2581 gagcaggcga ccgtccgcgg cgagcgcaca cgcgttgaac acggccttgg cgtgctggag
     2641 cggcaagccg aagctcacca ccatgccgcg cgtttccggc agcacctccg tcagcaggtc
     2701 gagcgcggtt tcgcgcacga acggggctaa aaatgcgtct tcacagccgt agcccgtgat
     2761 gcagagctcc ggcagacaca aaattccgac cccggccgcg cgcgccgaac ggatggccgc
     2821 gacgatgttc ccctgattga ccgcccaagc gagcggcgtc tggttcaacg cggcagcagc
     2881 gactttgagg agcctcaacg tgctgatttc ttaccacgtg ctggtgcacg gcgcgtaccg
     2941 gcggctccgg cgaggcaaag gtgtactctc gcgcgcggag cccaacatgc attcgctatc
     3001 cctcatttcg tggttcggcg ctcgcgccgc gtggacactt ttcgccggcg tggcgctttc
     3061 aggctgcatg agctccaacg acattcagtg tcacgtctcg acggcgccgg ctcaggcccc
     3121 cgccgacggc accgtcacct accacgcggc catcagcggc gacgcgcaca tcgattcgat
     3181 catttacaag accgacgcgg gcccccagac cgtcagccac cctccgctac cattcgagct
     3241 cgacgccgcg gtgacgagcg gcaccccact cggcatcatc gccacgggtt ggatggagga
     3301 aggcgccaac atcgtcgcgg gctacacgtt cgtggacgcg ctcggcgcgt cacccgacac
     3361 ggcgagcgca agttgccgct gattggcaag ctcgacttag cgccgctcag gagggcgcat
     3421 tcagtcgaaa ccagagcgaa cgttccgctc cgcagctccg gcacttgagc cgcgctcgtc
     3481 gcagtcggcc gctttcgcca gcgtgcgctt cgtgctcgac gaggtcgaac ggctcgtcgc
     3541 agcgagggca gcgtacactg cgcgcccgcg gctcgatcac ggcagccgtc atgacctcga
     3601 tcggccgctc ctcgcttcca cccggctccc aatcgagcag cgccatccta gcgcgcacga
     3661 gcttttcgct gagggcgcgc cggcggcgtt cgagcgtccg aggacgggga gtgcgtttgg
     3721 ggcgagacat gcgctcacga ggccgcgccg gcctcgcccc tcaaacatag cgcgcgactc
     3781 agtgcggcgc gccgtccgag atccagtttt cgatcgttgc gagctggtcg ctcgtgaggc
     3841 acttgctcgg atcggtggca gaagcgccgc cgcccccggc cgtcccaggg ccgcaaccca
     3901 acggcatgcg tttcgtcgcc acgctaccgt taccgccgtt cccactgctg ccactgctgc
     3961 caccggtgcc accgcagatc ggaccgtcga ccgttagctt ggtgatgatg aagcttgccg
     4021 ccaaattgct cggcacaacc aaggtgtcac cgctgcaggt ctgcgtccca agcggcattg
     4081 gctgcgtaag gttcgcgtag agctgcgcgt cggtgagggg cgtgacgcca ctcgtcccgc
     4141 ccgctccgcc gccggcgctc gctccgccgc cgccggtgct cacgccaccg ccgccgctca
     4201 ctccgccagc gcccgctcct cccgctgacg gggggatgtc cgtcaacttg acgcgagtca
     4261 gtgcggcacc cgcgccgttg tggcagctgc cgcagcgcgc gttgaacacg gcgcgcacgt
     4321 ccgcgaacgt cggaccagcg ccgcccgaac cgctcacgcc ggcgtgcccg ctggcgccgc
     4381 tcgtccctgc cccaccatga ccaccgttcg cggtcatgcc gcccgtgctc ggggcttcac
     4441 caccttggcc gccgccgcct tcaccgccgg ccccggcaag ctcgccgcct tgaccgcccc
     4501 cgggttcagt cgttccgccg acgccggtgc cacccgtacc gctgccggcg acacccgtgc
     4561 cggcgacgcc agtgccaccg cttccggcgc gggcacccgt gccgctactg ccgcccgtcc
     4621 cgcttccacc cttgcccgcc gtggaggagc ctcccgagcc cgccttcgca ccggcgctgc
     4681 cgcccttgcc agcgctcgcg cctttgcccg cagcaccacc tttgccgcct ttgccgcccg
     4741 cgccggtggt gtcgtcgtcg tccccgcaac ggagcacggc cgtcgccaga agcgtcaaga
     4801 tgatggcgga ttttacgcgt tgcatggcag ttctctcctt agttcctcga atggctcgca
     4861 aaattcgcga gcgcgggccc ctagcccaag tgcggcacct ctgtacatcg gctgaggcga
     4921 gttgggaagg tgtgctttgt tgatgttcgc ggagcgcacg accgcgcctt cgggcggact
     4981 tgccgatgaa aaaaatcgcc caatgggtta gaggacgcgt ttcaacagaa agccggcatg
     5041 actccgaata cgcgagccaa tatcacgcag ctcctgcaac agaatccagt cgtgttgtac
     5101 atgaagggca cgcgtgccgc gccgcaatgc ggattttcgg cgcgcgtggt ggagatcctc
     5161 gatggcctgc tcaccgacta ccaaacggtg gacgttctag gcgacccgga cttgcgggaa
     5221 ggcattaagc aattttcgtc gtggccgacg atcccgcagc tttacgtgcg cggcgagttc
     5281 gtgggcgggt ccgacatcgt cacggcgctg tatgagtcgg gtgagctcgc cgacaagctc
     5341 ggtgacctcg tttcggtgca cacgccgcac atcaccgtca cggacgccgc gcgagccgag
     5401 ctcgctcagg cgctcgaggg cgcgaacgaa tgcatccgcc tcgacgtgag ccccacgttc
     5461 gaacacgacc tcgcggtcgg tgtgcccgat cccaaggacc tgctcatcga cgccggcggc
     5521 attcgcgttt cgctgccgcg cggcacggca gcgcgggccg acggcattcg catcgatctc
     5581 gtccaaaccc ccgaaggacc cgccttcaag atcgacaacc cgaacgagcc cgcgcgcgtc
     5641 aagcgcttga gtcccgccga gctccacgcg cggctcacgc gcggtgacga cctcttgctc
     5701 gtcgacgtgc gcacgcccga agagcgcgaa atcgcgcaaa tccacggcag tcgcccgctc
     5761 gatgccgcgc ttcacgacga gatcggcaaa gggtcacgcg agcgcagcat cgtcgtctac
     5821 tgccaccacg gctcgcgcag ccagcgcgcc gccgaggagc tcgcgcagca gggatttcgc
     5881 gacgtgtaca atctcgttgg cggcatcaat gcctggtcga tggacgtcga ccccgacgtg
     5941 ccgatgtact gaccggcgcg ccgccgcgtc agcgcgtgtc attccccgcc gaagctcgga
     6001 ccatgccgtc cggccgcagc cgcgcgcgcc gtcgcgacgt ccttgttgcc gcgcagacac
     6061 tcccagcaat cggcgaggtc gacgaagccg cagccgcgcg tgagcttgaa gcgatcgagc
     6121 agcggtagca ggcgatcgtc gccgtactcg gcgactttcg acagcaacgc cttggcgtcc
     6181 gcgcagcgat gccgtttttc ggcgcgctcg acgtcgaaca cgagcgacag ctcgcgactt
     6241 gcgtgctccc gcacggccgt gtcgtccaag aattgccgcg cgcggcggtt cacgctttga
     6301 agctccggtt tttggcgcga gctttgccaa acgtcccaga gcaggtcgag acccttttcg
     6361 ccgagctggt gcgccgcgag ccgcagcgct tcttcggatg cagccggctc gaaggcgccc
     6421 cggtagacgt cggcgagcag cacgggatct tgccgcagcg ccgtgaacga ctgcatggac
     6481 gtacggtaag ccgccatgca cgcggcccac tcgccgaccg cgcagcgccc gtgaccgagc
     6541 gcgcgggcgt cgtcgagcgt gcgctgcttc gagggcagcg cgtcgagctc ggcgagcgcc
     6601 cgcgggtctc ccgtgagcgc tcgcgagacg agcgcgccat gacgcgcctc gtcggatgtg
     6661 gccggccctt gcgccgtgcc cagagcgtcc gcgccacgat gcttggacgc gcgcgagggc
     6721 acgacgagca cggcgagcag cgcgccgagc aacgcgagcg cgagcccgcc accgagcagc
     6781 gcgaagagcg gcagcgtcgt cccgccgagc gtcacggacc gcccgagcgc cgggacgcgg
     6841 cgcacgagcg tgcgctccgc cgcgacgaag ccggcccgca acgccgcgag cgcgccgtcg
     6901 agcgagcggg tcgccgcggc cagcggccgt tccccggacc gcgcttggga aaatcgtcgc
     6961 tcggctgacg tccggcccgc ggcgctcgcc ctccgtgaca cgcccggcgc gcgcgacgac
     7021 gaagcgagct cgccgagcag ctcgtcgatg cgctccacga gctcggccgc gctctgcacc
     7081 cgcgcttccg gcttcttttc gagcagctgc gccgtgagcg cgcgcacggg cgcggggatc
     7141 gagtcgggca gcggcggcgg cgcttccatc acctgccggg tgatgagcac gacgagatcg
     7201 tcggcgtcga acggcagttt accggagagc atctcgtaga gcatgatccc gagcgcatag
     7261 aggtcggagc ggccgtcgac cgggcggccc tgtccctgct cgggcgacat gtactgcggc
     7321 gtcccgaaga tggtgccaat ttgggtgagc ggcttgtgtc cgctgccttc gtcgacgtgg
     7381 agcttggcga taccgaaatc gagcaccttc acgaagtcgg cgagtccgtc gcgctcgacc
     7441 aggagcacgt tgtccggctt gagatcacga tgcacgatgc ccgcggcgtg agcggcgccg
     7501 agcgcttcgg cgatttggcg cgcgaccacg agcgcccgat acggcgagag cggcccttga
     7561 tcgatgacat caccgaggct cttgccctcg acgtactcga gggcgaggta aaacgagccg
     7621 tcttcgagct tgccgaagtc cgtggccgca gcgacgttcg ggtgctcgat gcgtccggcc
     7681 gccaccgcct cttgctcgaa gcgcgcaacc acttccgcgt tcgtcgtcat gtggcgatgc
     7741 aggatcttca ccgccacggg cttcttcatg tggacgtgct cggctcggta gaccgagccc
     7801 atgccgcccg acccgagcaa cttcacgata cgatagcgat ccgcgagcac tcggccgacc
     7861 tgtgggtcgg tctcgacgac ggtcgcatca ctcacgcggc cgattctggt cggcacctgc
     7921 agatccgtcg agtcgtaaac gcccggacgc gtcctttggc gcgtgagacc gcccgtgctc
     7981 gctcggggcc gccgtcaatc gcgcgggcgc caccgtggcg gggcttgccc acctctcgct
     8041 acacacgagt tatcggtcat aaagactgcc gtatacgttc atacgctctc gtacgacgcg
     8101 aaggcgagac gtccaccacc ctagcttggt aagttccaaa gcttcgcatg tccgacggat
     8161 tcgagacgat cgaattggtg ccggcgaagc agcggcgctc gcggctgggt tgcctcgggt
     8221 ggatcttgct gctgctcgtg ctcggggccg tggccgccct cgtgaaatac gtctacctgc
     8281 cgctccgcgc cgagcgcgct cgcctcgagc agcaagtgca cgacgcggcc gagcgcgaga
     8341 agggacttca aaagtcgctc agcgacgcgc aagcgcacgc gacggagctc tcgacgtcgc
     8401 gcgagcagct gtcgggcaag ctcgccgaaa cggaggccga gcgcgagaag ctcgaaggtg
     8461 agctcaagcg cgtccagaac gagctctccg cgattcttca gccggaaatc agcgctggta
     8521 atattcgcat ccggcggcgc ggcaacgagc tcgtcgtcga cgtgtccgac caagtactct
     8581 tcgattcggg ccacgccgac gtgagcgaag gcggacagaa ggtgctcgcg gaggtggcgc
     8641 cgagcctcgc gcggctcaag ggctacacga ttcaggtcgc cggccacacc gaccgcacgc
     8701 gcgtcgtgaa cccagagact cgcgagcgct tcccgacgaa ttgggagctc tcgacggcgc
     8761 gagcgaccaa cgtcgtccgc tacctcgagg aacgaggcaa aatccccggc acacgcctgg
     8821 aagccgccgg gttcgcggag ttccgccccg tcgcgggcaa cgccacggcc gaggagcgcc
     8881 agaagaaccg gcgcatcgag ctcgtcttga tccccgcggg agccccgagt caataaaacg
     8941 aaccggtgcg aaggagcgat ggcacgccgc tacgcaagcg gcaaagcgct acgcggccgc
     9001 accctcagcg aagcacgggc tggccggcct agactggcat cgaacttgct ccgttggcgc
     9061 gtatgacgtt ccaacgcgcc gctctcggtt tgacgctcgc gagcaccctc gtgctcgggt
     9121 ctggctgcgc ggaaacagtc agcaaagcag cgcggaccgc ggccccggcg gccgtcgaag
     9181 gctccgtgaa gtcggcgcgc gatccagcga cgcacgacac gatcgcggac atgctgtccg
     9241 atccgcagat tcgcggcgcg acggcccaga tgtcgcaggc catgatggac ggcatcctga
     9301 actcgatcac cgaaaaggag cgcctcgccg gcgccgaatc ggccagtgac gcct
//
LOCUS       DATIML010001121         3487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5148204, whole genome shotgun sequence.
ACCESSION   DATIML010001121 DATIML010000000
VERSION     DATIML010001121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3487
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5148204"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..975)
                     /locus_tag="VLJ38_19305"
     CDS             complement(<1..975)
                     /locus_tag="VLJ38_19305"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU41739.1"
                     /translation="MRRSEVALGAAVTLFALALHFVELEPIEIGGDAINKWHFVRQWF
                     HHFDVTKVVWDHHLSRLGVNAPTAVIQLLLGRRAPIYHVASLAASTAAVALVYAIGVM
                     AHGRLAGFIAAVWLAVFPSWVRAGTQLSPDSFGAAWAALALLLLLAYGRSERRAVLWL
                     VLSAFAAAWSYLAKEPLVFFIPGALIGVYVLKRRLRDVAIYAAVPLFVFAVETLFYRS
                     VSQYSSRFALVSATHGKDPVRTQKYLVIHSVWDALGRFTSLDDYYYPLFVLALLGVVI
                     LPFVTKNRRVWAVLAFPTTFFFFYTFAFRRLNPLTLWTRFLARYFDAAI"
     gene            complement(1078..2634)
                     /locus_tag="VLJ38_19310"
     CDS             complement(1078..2634)
                     /locus_tag="VLJ38_19310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41740.1"
                     /translation="MIRRYWTDLLYVALATGIVLWVAWDAFQFRLITYSPGSDYWEHT
                     AVLRALLDNPWHPSHPLIAGDIPSPRFGPHFLLVALAGRALHYDAVDTMALGAVFNTV
                     LVLAGIWLFFRSYFREPRASLYGLVVFFGSWLEAPHFSNVFKLKVFFSVAGYPSSAAL
                     AVTLLGLTLVVRLLRAERRSYTGLALSALTWAYVYITHPLTATMALPAAVLLALTEPG
                     VLRERRLWVAGSVAFGFCLSALWPYYPALGMVFGGTVHRMRRLDPDAFAPEHEFYDDT
                     HLYNILGYCLLSFLILPYLWVRRQDVFVVLGALLMLLVFTLGAFFPIPLGHRYVLLAV
                     FFLQIALVRLLVTLTPRAPKPGTWLGRLGPRIGAGVLVAAFLVWLTLSNIAAAREHFR
                     RTAAGAHDKESVPLRYARRVGELAGPRAIVLSTALASWSLPTFGPKIVTPLHKNPLIF
                     DAEERRHDALSFFSPRATNDERRDIVARYHVTHVVVPARNLSAVSGFLRDAEFVARLP
                     GGYTLYSLTP"
     gene            complement(2631..>3487)
                     /locus_tag="VLJ38_19315"
     CDS             complement(2631..>3487)
                     /locus_tag="VLJ38_19315"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSU41741.1"
                     /translation="AELASALELSLGAIFALLALNTVAHLQRAYEFTYMLRRLGVREP
                     FGEGFLLTGAGFLLNHLPFNAGLVMRATVLKRDHALPYTSYLALVMVNALVNVAMAAV
                     MGLLSVAFSAAERSARAPLAVAFALVLVAAVALAFVPTGWVPARSGFVWNRLRTLGTG
                     IRLVRGDAPNLALLGLLAFTKVAVAAVRMWICFGALQTHLSPLAAALLSSTTIVFSLV
                     NVTPGNLGLREVAMAAVSTLLGTSYEVGIAAASIDRAVLLLYTVVSGLPGLYSLRRRG
                     PFKASATR"
BASE COUNT          723 a         1064 c         1303 g          397 t
ORIGIN      
        1 aatggcggcg tcgaagtagc gcgcgaggaa gcgggtccag agcgtgagcg ggttcaggcg
       61 gcgaaacgcg aaggtgtaga agaagaagaa agtggtgggg aacgcgagca cggcccagac
      121 gcggcggttc ttcgtgacga acggcaggat cacgacgccg agcagcgcga gcacgaagag
      181 cggataataa tagtcgtcga ggctcgtgaa gcggccgagt gcgtcccaca cgctgtggat
      241 gacgaggtat ttctgcgtgc gcacgggatc tttgccgtgt gtcgcggaga cgagcgcgaa
      301 gcggctcgag tactggctca cgctgcgata aaatagcgtc tcgaccgcga agacgaacag
      361 cgggaccgcg gcgtaaatcg cgacgtcacg cagccggcgc ttgagcacgt aaacgccgat
      421 gagcgcgccg ggaatgaaga agacgagcgg ctccttggca aggtatgacc aagccgcagc
      481 gaacgccgag agcacgagcc acagcactgc acgccgctcg ctgcgcccgt aggcgagcag
      541 caagaggagc gcgagggccg cccacgccgc accgaacgag tcgggcgaga gttgcgtgcc
      601 cgcgcgcacc cacgacggaa acacggcgag ccacaccgcg gcgatgaacc ccgcgagacg
      661 tccatgcgcc atcacgccaa tcgcataaac gagcgccacg gccgcggtcg acgccgccaa
      721 ggaggccaca tgataaatcg gcgcgcgacg gccgagcagc agctgaatca cggccgtcgg
      781 cgcgttcact cccagacgcg acaagtggtg gtcccagacg accttcgtca cgtcgaagtg
      841 atggaaccat tggcgcacga agtgccactt gttgatggcg tcgccgccga tctcgatcgg
      901 ctcgagctcg acgaagtgca gcgctagcgc gaagagcgtc actgccgcac cgagggcgac
      961 ctcggagcgg cgcacggaca gccacgcgcg gcagcgggaa atcagaaccg tcgtgtgcgc
     1021 accgaaggta ggcaagagcg acgcggaggc ataccacggg cgcgcgggag cggagcgcta
     1081 gggcgtgagt gaatagagcg tgtagccgcc cggcaggcgc gccacgaact cggcgtcacg
     1141 caagaagccg gagacggcgc tcaggttccg cgccggcacg acgacgtgcg tgacgtgata
     1201 gcgcgcgacg atgtcgcggc gttcgtcgtt ggtcgcgcgc ggcgaaaaga agctgagcgc
     1261 gtcgtggcgg cgctcctcgg cgtcgaagat gagcgggttt ttgtggagcg gcgtcacgat
     1321 tttcggaccg aacgtgggaa gcgaccacga ggcgagcgcg gtgctgagca cgatcgcgcg
     1381 cggcccggcg agctcaccca cgcgtcgcgc gtaacgcaaa ggcacgcttt ctttgtcgtg
     1441 cgctccggca gccgtgcgcc ggaaatgctc gcgtgcggcg gcaatgttcg acagcgtgag
     1501 ccagacgaga aacgccgcga cgagcacgcc cgcgccgatg cgtggcccca ggcggccgag
     1561 ccaggtcccc ggcttcggcg cgcgcggcgt gagcgtcacg agcaggcgca cgagcgcgat
     1621 ttgcaggaag aagacggcga gcagcacgta gcggtgcccg agcgggatcg gaaagaacgc
     1681 gccgagcgtg aacacgagca gcatcaaaag cgcgccgagc acgacgaaca cgtcctgtcg
     1741 gcgcacccac aggtacggca ggatcaggaa cgagagcagg caatacccga ggatattgta
     1801 gaggtgcgtg tcgtcgtaga actcgtgctc gggcgcgaag gcgtcggggt cgaggcgacg
     1861 catgcggtgc accgtgccgc cgaacaccat gccgagcgcg gggtagtagg gccagagcgc
     1921 gctcaagcag aagccgaaag caacggagcc tgccacccag agccgccgct cgcggaggac
     1981 gccgggctcg gtgagcgcga ggagcacggc agcgggcagc gccatcgtcg ccgtgagtgg
     2041 atgggtgatg tagacgtacg cccacgtgag cgccgagagc gcgagccccg tgtacgagcg
     2101 gcgctcggcg cgcagcagcc gcacgacgag ggtcaggccg agcagcgtga cggcgagggc
     2161 cgcactcgac gggtagcccg ccacgctgaa gaagaccttg agtttgaaga cgttcgagaa
     2221 gtgcggcgcc tcgagccagc tgccgaagaa gacgactagc ccgtagagcg acgcgcgcgg
     2281 ctcgcgaaaa tagctgcgga aaaagagcca aataccggcc aggacgagca cggtgttgaa
     2341 gacggcgccg agcgccatgg tgtcgacggc gtcgtagtgc agggcgcgcc cggcgagcgc
     2401 cacgagcagg aagtgcggac cgaagcgggg cgaaggaatg tcgccggcga tgagcggatg
     2461 cgacgggtgc cacgggttgt cgagcagcgc gcgcagcacg gcggtgtgct cccagtagtc
     2521 ggagcccgga ctgtacgtga tgaggcgaaa ctgaaacgcg tcccacgcga cccagaggac
     2581 gatcccggtc gcgagcgcga cgtagaggag gtcggtccag tagcgcctga tcatcgcgtg
     2641 gcgctcgctt tgaagggccc gcggcgccgc agcgagtaga ggcccggcag gccggagacg
     2701 accgtataga ggagcagcac ggcgcgatcg atgctggcgg cggcgatgcc gacctcgtag
     2761 ctcgtgccga gcagcgtcga gacggcggcc atggcgactt cgcgcaagcc gaggttaccg
     2821 ggcgtgacgt tcacgagcga aaaaacgatg gtggtggagg agagcagcgc ggccgcgagc
     2881 ggcgataggt gcgtctgcag cgcgccgaag caaatccaca tgcgtactgc cgcaacggcg
     2941 actttggtga aggcgagcag gccgagcagc gcgaggttcg gcgcgtcgcc gcgcacgagc
     3001 cggatgccgg taccgagcgt gcgcagccgg ttccaaacga agccggagcg cgcgggcacc
     3061 cagccggtcg gcacgaacgc gagcgcgacc gcagcgacga ggaccagagc gaacgcgacg
     3121 gcgagcggcg cgcgcgcgct gcgctccgcc gccgagaacg ccacggagag cagccccatc
     3181 accgccgcca tcgcgacgtt gacgagcgcg ttcaccatca cgagcgcgag gtacgacgtg
     3241 taggggagtg cgtggtcgcg cttgagcacc gtggcgcgca tgacgagccc ggcgttgaac
     3301 ggcaggtgat tgagcagaaa gcccgcgccc gtgagcagaa agccttcgcc gaacggctcg
     3361 cgcacgccga ggcgccgcag catgtacgta aattcgtagg cgcgctgcag gtgagcgacc
     3421 gtgttgagcg cgagcagcgc gaaaatcgcg ccaaggctga gctcgagcgc cgaggcgagc
     3481 tcggcgc
//
LOCUS       DATIML010001122         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1972547, whole genome shotgun sequence.
ACCESSION   DATIML010001122 DATIML010000000
VERSION     DATIML010001122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1972547"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..874
                     /locus_tag="VLJ38_19320"
     CDS             230..874
                     /locus_tag="VLJ38_19320"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41742.1"
                     /translation="MSQPPRAKLAAVPTAVTPFPAERLSDAELVRSAARGDADAVGVV
                     WQRYAPLVRGVLRGAIGPDHALEDLLQEVFVGFLKGAKNIHEGAALRGYLVGVAVRLA
                     ALELRRRKIRRWVMLTPTGVLPERSELPADSEGRAALRALYHVLDGVSSRRRLAFVLR
                     HVQGLEILDVAATLGVSESTARRELERARSYVLKRVEREPALKPYLERATGAAS"
     gene            871..2148
                     /locus_tag="VLJ38_19325"
     CDS             871..2148
                     /locus_tag="VLJ38_19325"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU41743.1"
                     /translation="MNERHEEGLSRVAALMQRYAEAPVEPGLDQAGKLALERRLRADA
                     APRSRALRPLLVALALVAAAGLVLLVELRPRAVSYEVRGTRSDGAYISAPAATPVTVT
                     FSDGSSLEAGPGARLRVEEARVTGARVLVERGTTRVHVEHHSSSAWNFVAGPFDVHVT
                     GTRFELSWDPSTEAVDLRLLEGSVEVRGPFAEAPIAVRTGQRFHADLSSRSMTVIDAL
                     AAAAAPAVPASSASDAEDGARPEAAAPSEDEPKAVARPEPTAHAGPSPLVSESWPVLV
                     ARGQFETVVAKAGERGASECERACSASDLRALADAARYTGRSAMAESALLSLRRRFGT
                     SRESRSAAFWLGRVEEARGATAAAERWYDTYLREVPAGELAAEALAGKMRTVLARDGR
                     AAAAPLATQYLARYPNGVHAESARGILGQTSRP"
BASE COUNT          323 a          781 c          795 g          322 t
ORIGIN      
        1 ccgggtcgag ctgcagcacc gtcgggcggc tcggcgacta tgcgaacctc cgcgcccgta
       61 gctatcggaa gttccgggca acgcatttca cgacgttccc ggcctggtac cacccgtccc
      121 gccggcagca ggtgacggaa cccgagtcgg tggtctctca aaattgaagc agcactttac
      181 atgacggctg gcgccgggat gcggcaactt caagcttcag gcaagcctga tgtcccaacc
      241 tccgcgcgcc aagctcgcgg ccgtccccac ggcagtcacg ccgtttccgg cagaacgcct
      301 gagtgacgcc gagctcgtac gctcggcggc gcggggtgac gccgacgccg tcggcgtcgt
      361 ctggcagcgc tacgctccgc tcgtccgtgg cgtcctgcgc ggggccatcg ggcccgacca
      421 cgctctcgag gatctcctgc aagaggtgtt cgtcggcttc ctcaagggag cgaagaacat
      481 ccacgaaggc gcggcgctgc gcggctatct cgtgggcgtc gcggtgcggc tcgcagcgct
      541 cgagctccgg cgccgcaaga tccgacgctg ggtgatgctc acaccgacgg gcgtcttgcc
      601 cgaacggtcg gagctgcccg ccgacagcga gggacgcgcg gcgctccgcg cgctttacca
      661 cgtgctcgac ggcgtgagca gccggcgccg gctagcgttc gtgctgcgtc acgtgcaggg
      721 gctcgagatc ctcgacgtcg cggcgacgct cggcgtctcc gagtcgacgg cgcgccgtga
      781 gctcgaacgc gctcgctcgt acgtgctcaa gcgcgtcgaa cgcgagcccg cgctcaaacc
      841 gtacctcgag cgcgcgacgg gagcagcgtc atgaacgagc ggcacgagga aggactttcc
      901 cgggtcgcgg cgctcatgca gcgctacgcc gaagcgcccg tagagccggg gctcgaccaa
      961 gcgggcaagc ttgcgctgga acgacggctg cgcgcggacg cggcgccacg cagccgcgct
     1021 ctgcggccgc tgctcgtcgc tctagcgctg gtcgcggcgg cggggctcgt gctcttggtc
     1081 gagctcaggc cacgcgcggt gagctacgag gtgcgcggga cgcggagcga cggcgcctac
     1141 atcagcgcgc ccgccgccac gcccgtcacg gtgacgttct ccgacggcag ctcgctcgaa
     1201 gccgggccag gcgcgcggct gcgcgtcgag gaggcgcgcg tgacgggagc gcgcgtgctc
     1261 gtcgagcgcg gcaccacgcg cgtccacgtc gagcatcact cgagttcggc gtggaacttc
     1321 gtggcggggc cgttcgacgt gcacgtgacg ggcacgcgct tcgagctctc ctgggatcct
     1381 tcgacggaag ccgtcgattt gcgcctgctg gagggctcgg tcgaagtccg cgggccgttc
     1441 gccgaggcgc cgatcgccgt ccgcacgggg cagcgttttc acgccgatct ctcgagccgc
     1501 agcatgacgg tgatcgatgc actggcggca gccgccgctc cggcggtgcc cgcgtcgagc
     1561 gcgagcgacg cggaggatgg cgcacgcccc gaagcagcgg cccccagcga agacgaaccc
     1621 aaagcagtgg cgcgtcccga gccaacggcg catgcggggc cgagtccgct cgtgtcggag
     1681 tcgtggcccg tactcgtcgc ccgtggccag ttcgagaccg tcgtcgccaa agccggcgag
     1741 cgtggcgcga gcgagtgcga acgcgcctgc tccgcgtcgg acctgagagc actcgcggac
     1801 gcggctcgtt atacaggccg gtcggccatg gccgaaagcg cgctcttgag cttgcgccgg
     1861 cgcttcggca cgtcgcgcga aagtcgctcg gccgctttct ggctcgggcg cgtcgaggaa
     1921 gcacgcggcg ccacggccgc ggcggagcgc tggtacgaca cttatctgcg tgaggtgccg
     1981 gccggcgaac ttgcggccga agcgctcgcc ggcaaaatgc gcacggtctt ggcgcgcgac
     2041 ggacgcgccg ccgccgcacc actcgcgaca caatatctgg cacgctatcc gaacggtgtg
     2101 cacgcagaga gcgctcgcgg gatcctcggg cagacgtcac gcccatgacg actctagagt
     2161 tcgacgcccg ggtcggcgcg gtcgctacgc gcgcctcgga gtccggcttc tctgcctgat
     2221 t
//
LOCUS       DATIML010001123         1574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5437602, whole genome shotgun sequence.
ACCESSION   DATIML010001123 DATIML010000000
VERSION     DATIML010001123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5437602"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /locus_tag="VLJ38_19330"
     CDS             <1..1020
                     /locus_tag="VLJ38_19330"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HSU41744.1"
                     /translation="RVHETVEKLTSVGKRERPLTRLDVGVVAREAVVVARPHLERQGV
                     TLHERYDEACFTLGRADALGQVVLNLVFNATDACAGSSRPAVWVRTSVDGPHVLLSVE
                     DNGPGVPADAVEHIFSPFFTTQSRGNNAGLGLKICSDVVAEHGGHIEVHERPSGGAAF
                     RVLLPRVDAEGRASLSELPPPSLGHHGRRQVLVIDDDPVTARTLRRGLKPHDVQTAAS
                     ASEAEILLLDPTYVPDLVVCDVFLPGANGHVVHQRVAEARPELAARFVFVTGGGLGRT
                     EADYIKLSGCPALLKPIDLKALLGFLAPPAPDSTPPTPVRTLSEGASSERPTIEPKTE
                     PKPKL"
     gene            complement(1042..>1574)
                     /locus_tag="VLJ38_19335"
     CDS             complement(1042..>1574)
                     /locus_tag="VLJ38_19335"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU41745.1"
                     /translation="GRTGEVKLGDFGILLSAFVDRRTHPGELKGKVGYMSPEQAMGGT
                     IDVRSDVFALGIVLAEMLLARPLFSGKNEFEILTKIHDADISNLDKYGHGIPQEVVDI
                     VRTALQRERGNRYSNAAAFALAIQNATERLGVPASEAELISWLSAVGALPSRSGTLPV
                     QRVEDYLPLQRTKDER"
BASE COUNT          254 a          547 c          523 g          250 t
ORIGIN      
        1 cgcgtccacg agacggtcga aaagctcacg agcgtcggca agcgcgaacg ccccctgacg
       61 cggctcgatg tcggcgtagt cgcgcgcgaa gccgtggtgg tggcgcgccc gcacctcgaa
      121 aggcagggcg tcaccctgca cgagcgctac gacgaggcat gcttcacgct cggccgcgcc
      181 gacgcattgg gccaagtcgt cttgaacctc gtgttcaacg ctaccgacgc ttgtgcgggc
      241 agctcgcgac ccgcggtgtg ggtccgcacg agcgtggacg gtccgcacgt cctgctcagc
      301 gtcgaggaca acggtccggg cgtgccagcg gacgccgtcg agcacatctt ttcgccattt
      361 tttacgacgc agagccgcgg caacaacgcg gggctcggcc tcaagatctg cagtgacgtc
      421 gtcgccgagc acggcgggca tatcgaagtc cacgaacggc cgagcggcgg cgccgcgttc
      481 cgcgtgctct tgccgcgcgt cgacgccgaa ggccgagctt cgctgagcga gctgcctccg
      541 ccgtcgctcg ggcaccacgg acgccggcaa gttctcgtca tcgacgatga cccggtgact
      601 gcgcgcacgc tcaggcgcgg tctcaagccg cacgacgtgc agacggcggc gagcgcatcc
      661 gaagccgaaa ttctcttgct cgacccgacg tacgtgccgg acctcgtcgt ctgcgacgtg
      721 tttttgccgg gtgccaacgg ccacgtcgtg caccagcgcg tcgccgaagc gcggcccgag
      781 ctcgccgcgc gcttcgtgtt cgtcacgggc ggggggctcg gtcgcaccga agccgactac
      841 atcaagcttt ccggttgccc tgccctgctc aaacccatcg acttgaaggc actgctcggc
      901 tttctcgcac cgccagcgcc cgattcgacg ccgccgacgc ccgtgcgcac cctgtcggaa
      961 ggcgcgagct cggaacgtcc caccatcgaa cccaagaccg agccgaagcc gaagctctga
     1021 gccccgccac gcggccgcgg ctcagcgttc gtctttggtg cgctggagcg ggaggtaatc
     1081 ctcgacgcgc tgcacgggca acgtgccgct gcgcgaaggg agcgcgccga cggccgaaag
     1141 ccaggagatg agctcggcct cgctggccgg cacgccgagc cgttcggtcg cgttctggat
     1201 cgcgagcgcg aacgccgccg cgttcgagta acgattgccg cgctcacgct ggagcgccgt
     1261 acggacgata tcgaccacct cttgcgggat gccgtgaccg tacttgtcga ggttcgagat
     1321 gtcggcgtcg tggatcttcg tgaggatctc gaactcgttc ttgccggaaa agagcggacg
     1381 cgcgagcagc atctcggcga gcacgatacc gagcgcgaag acgtcgctcc gcacgtcgat
     1441 ggtgccgccc atcgcttgct cgggtgacat gtagccgacc ttgcccttga gctcgcccgg
     1501 gtgtgtgcga cgatcgacga acgcgctcag gaggatgccg aagtcgccga gcttcacttc
     1561 ccccgtgcgg ccga
//
LOCUS       DATIML010001124         2988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3701439, whole genome shotgun sequence.
ACCESSION   DATIML010001124 DATIML010000000
VERSION     DATIML010001124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3701439"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="VLJ38_19340"
     CDS             <1..519
                     /locus_tag="VLJ38_19340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41746.1"
                     /translation="RPHAPARGRQRSVVTKPLGLPRFRELVAAYGGRLELWPPAHVSA
                     ARELLAVSAEARALLEAETAFDRELAAANQPPEVPAALLRRLNEVPLRAPQRRVWWPF
                     GRAWVPAVGWAIAAALGVSWGLFATPFDAVEGEAAPTVAALDSSAEAAPASPADDDFS
                     ALARGTLVEFEE"
     gene            522..998
                     /locus_tag="VLJ38_19345"
     CDS             522..998
                     /locus_tag="VLJ38_19345"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HSU41747.1"
                     /translation="MTPLSKRLLIALAISGALNLLCAGLLIGSAIHRSRMHAARTHFE
                     PAPRGARFERRGADGMREGRRGAAPFGGILAAHRDELVERRRAVVEARRAVERALEQE
                     PFDPAALERSLTNLRNETRTSQELVHKTLAQAAQGGDAETRRKIAQGFAKLGPGGP"
     gene            complement(1248..2450)
                     /locus_tag="VLJ38_19350"
     CDS             complement(1248..2450)
                     /locus_tag="VLJ38_19350"
                     /EC_number="2.5.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF015875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016432 - tRNA-uridine
                     aminocarboxypropyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-uridine aminocarboxypropyltransferase"
                     /protein_id="HSU41748.1"
                     /translation="MSELIENGRDRSLPGWEPRVVCAACGRPASVCLCAEIVPVVTQT
                     RVVILQHPRESGVPINTARLAELALPNSERHVGVEFGTSARVRQALVNPDAPPILLFP
                     GPGARDLAVERPPHPVTLVVLDGTWWQAQKLLKRNPDLLRLPRYALAPAAPSRYRIRR
                     EPAEHCVSTIEAIVQALVALEGRADARALLRPFDAMVEHQLRFAAEKGTQRHLAKNRG
                     TKPRRFPAVLRERAADLVVGYGETNAWPRGTPLGDAAEVVHLVLERLASGERFEAFIA
                     PRRPLSPSFSHHTALADADVLGAESFAAFSTRLAAYLRPSDVVGSWGYFWCQSLAREG
                     VSLPELFDLRVAARQHLRERTGDVLACAEKLGAPAAIWARGRTGRRAAGAIAVARALL
                     RRVALGDT"
     gene            complement(2505..>2988)
                     /locus_tag="VLJ38_19355"
     CDS             complement(2505..>2988)
                     /locus_tag="VLJ38_19355"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSU41749.1"
                     /translation="LRERRNINGGKQDDFNIFDTKQISDTLSGTTTLLTSIVTAVAAI
                     SLIVGGIGIMNIMLVSVTERTREIGVRMALGAKPRHVLAQFLIEALVLSIAGGIIGIA
                     IGVGLAILLGKRFDWPVLFQPQVILVAAGFSGLVGIVFGLYPARKASELDPIDALRHE
                     "
BASE COUNT          460 a         1010 c         1084 g          434 t
ORIGIN      
        1 cggcctcacg cccccgcgcg cgggcgccaa aggagtgtcg tgacgaagcc gctcgggctc
       61 cctcgctttc gcgagctcgt cgccgcgtat ggcggaaggc tcgagctttg gccgcccgcc
      121 cacgtgagcg cggcccgtga gctcttggcc gtttcggccg aggcacgcgc gctgctcgaa
      181 gcagagacgg cgttcgatcg cgagctcgcg gccgcgaatc agccgcccga ggtgccggcg
      241 gcgctgctcc gtcgcttgaa cgaggtgccg ctcagggcgc cgcagcggcg cgtgtggtgg
      301 ccgttcggac gcgcgtgggt gccggccgtc ggctgggcaa tcgccgcggc actcggcgtg
      361 agctggggtc tgtttgcgac cccgttcgac gccgtcgaag gcgaggcggc gccgacggtc
      421 gcggccctcg actcgtccgc ggaagcagcg ccggcgtcgc cggccgacga cgatttcagc
      481 gcgctcgccc gaggcacgct cgtcgaattc gaggaatgat catgactccg ctctccaaac
      541 gtctgctcat cgcgctcgcg atttcgggtg cgctgaacct cttgtgcgcc gggctcctca
      601 tcggcagcgc gattcatcgt tcgcgcatgc acgcggcccg gacgcacttc gagccggcgc
      661 cgcgcggcgc gcgcttcgag cggcgcggag cggatggcat gcgtgagggg cggcgtggtg
      721 ccgcgccgtt cggcggcatc ttggccgcgc atcgggacga gctcgtcgag cgacggcgcg
      781 cggtcgtcga agcgcggcgc gccgtcgaac gagcgctcga gcaagagccg ttcgaccccg
      841 ccgcgctcga gcgttcgctc acgaacctgc gcaacgaaac caggacctcg caggagctcg
      901 tccacaagac gctcgcgcaa gcggcgcagg gcggcgacgc cgaaacccgg cgcaagatcg
      961 cccagggctt cgccaagctc ggaccgggcg gtccctgagg acgcaaaccg cagagagccc
     1021 gaagctcgtc gcccgccagt cactgtcgac gcgatttccg tgtccgcctt ccggcagggc
     1081 cagcccgcag ggcggcaggt acggcatcgc tcgttaccct tggcgagcgg gacgacgaat
     1141 ctgcttcgta gaactctcag cttagcgacg gaggcgcgcg acgctcgtga aatcggcatt
     1201 cgagcgcgat ttgcgtacac aaaggtgggg gacgcgcgga gcgttgccta cgtgtcgccc
     1261 agagccactc tgcgcaagag tgcccgagcg accgcgatgg cgcctgcggc gcgacgtcca
     1321 gtgcgtccgc gtgcccagat ggccgcgggt gctccgagct tctccgcgca ggcgagcacg
     1381 tcgcccgtgc gttcgcgcag gtgctggcga gcggcaacgc gcagatcgaa gagctccggc
     1441 aagctcacgc cttcgcgtgc gagtgactgg caccagaagt agccccagct gccgaccacg
     1501 tcgctcggac gcaagtacgc ggcaagccgc gtgctgaacg cagcgaacga ctcggcgccg
     1561 agcacgtctg cgtccgcgag cgcggtatgg tgcgaaaacg agggcgaaag cgggcgccgc
     1621 ggcgcgatga acgcctcgaa gcgctcgccg ctcgcgagac gctcgagcac gaggtgcacc
     1681 acctccgcgg cgtcgccgag cggtgtgccg cgcggccagg cgttcgtctc gccgtagccg
     1741 acgacgaggt cggccgcgcg ttcgcggagc accgccggaa atcgccgtgg cttcgtgccg
     1801 cggttcttcg cgaggtggcg ctgggttcct ttttccgcag cgaagcgcag ttggtgctcg
     1861 accatcgcgt cgaaggggcg gagcaacgcg cgcgcgtcgg cgcggccctc gagcgccacg
     1921 agcgcctgca cgatggcttc gatggtcgag acgcaatgct cggccggttc gcggcgaatg
     1981 cggtagcgac tcggcgccgc gggcgcgagc gcgtagcgcg gcaaccgcag caggtcgggg
     2041 tttcgcttca acagcttttg cgcctgccac cacgtgccgt cgagcacgac gagcgtcacg
     2101 gggtgcggcg ggcgctcgac ggccagatcg cgcgcgccgg gcccggggaa gagcagaatc
     2161 gggggcgcgt cggggttaac cagcgcttgc cgcacgcggg ccgaagtgcc gaattcgacg
     2221 cccacgtgcc gttccgaatt cggcagcgcg agctcggcga gccgcgccgt gttgatcggc
     2281 acgccgctct cgcgtggatg ctgcaaaatc acgacgcgcg tctgcgtcac gacggggacg
     2341 atctcggcgc aaagacacac gctcgccgga cgcccgcagg ccgcgcacac gacgcgcggc
     2401 tcccagccgg ggagcgagcg gtcacggccg ttttcgatga gctcagacaa agcggtgcgc
     2461 ggcgttctag ccgattttgg ccactgccgc cgctcgcgcg cgcgtcactc gtggcgcaag
     2521 gcgtcgatgg ggtcgagctc ggaggctttg cgggccggat acaggccgaa cacgatgccg
     2581 acgagaccgc tgaaacccgc cgccacgagg atgacttgcg gctgaaagag gacgggccag
     2641 tcgaagcgtt tcccgagcag gatggcaagc cccacgccga tggcgatgcc gatgatgccg
     2701 cccgcgatcg agaggacgag cgcttcgatc aagaactgag cgaggacgtg gcgaggtttg
     2761 gcgccgagcg ccatgcgcac gccgatctcg cgcgtgcgct cggtcaccga gacgagcatg
     2821 atgttcatga tgccgatgcc gccgacgatc aggctgatcg ccgccaccgc ggtgacgatg
     2881 ctggtcagca aggtcgtggt gccggaaagc gtgtcgctga tctgcttggt gtcgaagatg
     2941 ttgaaatcgt cctgcttgcc gccattgatg ttgcggcgtt cgcgcagc
//
LOCUS       DATIML010001125         2508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3124195, whole genome shotgun sequence.
ACCESSION   DATIML010001125 DATIML010000000
VERSION     DATIML010001125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3124195"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..596)
                     /locus_tag="VLJ38_19360"
     CDS             complement(144..596)
                     /locus_tag="VLJ38_19360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41750.1"
                     /translation="MVDRSGFDEEVFGKGARSDLEVVLDTEIARLSYDARYKIVHHEF
                     RSFVHGHAFREVLDAGLDLLRARGARKWLSDDHGNGPITPADGEWGLHNWAPRAIAAG
                     WTYWAVVLPEKVLGQMNMRRWIETYSKLGVVAQAFTDLEEARAWLRIQ"
     gene            complement(736..1128)
                     /locus_tag="VLJ38_19365"
     CDS             complement(736..1128)
                     /locus_tag="VLJ38_19365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41751.1"
                     /translation="MQPQSEHAPTPGHYVLVVEDNQDVRETLVELLESYGYAAIGAEH
                     GREALEKLDRLGTCPCMIVLDLMMPVMDGRTFRLEQLKKPEVSSVPVVVVSAYDESPE
                     RLRDMQALAYLRKPINLTELIRVVGQHC"
     gene            complement(1133..>2508)
                     /locus_tag="VLJ38_19370"
     CDS             complement(1133..>2508)
                     /locus_tag="VLJ38_19370"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU41752.1"
                     /translation="PSERLRRLFAPFEDNASRKHGGSGLGLGLFIAHELARAHGGSLE
                     AQSSPETGTTFTLTLPRRAALRAPPSRPGALSAAPDDDDFDAWQRSMTLGETGEKFRL
                     LVESVKDYAIFMLDTHGRVATWNAGAERIKGYQAREIIGQHFSTFYGRDDVTSGLCER
                     ELAIAASEGRLETEGLRVRKDGTTFWANVVITALYDERGTLTGFAKVTHDLTERRRLE
                     EERLRRAQAEEAVRVRDEFLSVASHELRTPLAVVELQLDALEAQLSSREPSLARTLSR
                     ARRGTSQLTRLVDSLLEATRIATDSFTLFRETFELSRALGACLDTLRKPAELAGCELT
                     TSLEGPLVGNWDRRRLEQLVTNLVWNAFTYAPGAPVHVGATCDGGAVVIEVSDHGPGI
                     AKADAERIFDRFERACATSEFSGLGLGLYVVREIADAHGGSVSVDTAPGRGARFMVRL
                     PTGTTAA"
BASE COUNT          401 a          824 c          857 g          426 t
ORIGIN      
        1 tccggcacct ccgcacggag gcggctctgc tcgagcgccg tggacggact tacgccgaag
       61 gacgacatgc gcgggttagc tccgatacgg ccataccggc gtcgaagtaa ggtccgacct
      121 agccgcggtg cgcgagcgcg cgcctactgg atcctgagcc aggcgcgcgc ttcttccaga
      181 tccgtgaagg cctgcgcgac gacgccgagc ttcgagtagg tctcgatcca gcgacgcatg
      241 ttcatctgtc cgagcacttt ttccggcagc acgacggccc agtacgtcca gccggccgcg
      301 atcgcgcggg gagcccaatt gtgcagcccc cactcgccgt cggccggcgt gatgggcccg
      361 ttgccgtgat cgtcggacag ccacttgcgc gcgccgcggg ctcgcagaag gtcgagccca
      421 gcgtcgagca cttcgcggaa ggcgtggccg tggacgaagc tccggaattc gtggtgcacg
      481 attttgtagc gggcgtcgta gctcaggcga gcgatctcgg tatcgagcac gacctcgagg
      541 tcactgcgag cacctttgcc gaaaacctct tcgtcgaaac ccgacctatc gaccatctat
      601 atagccctcg acgcgaactc gtcttcctcc tgcaacggca ggcgcgtcga aaactttagc
      661 ttggttcgcc gacggtcggc gtgcttgacg cacccccggt gcgcatgtgg gcggagcgag
      721 caccgacggt acgcgctagc agtgctggcc gacgacgcgg atgagctcgg tcaagttgat
      781 cggcttgcgc aggtaggcga gcgcctgcat gtcgcgcagc cgctcggggc tctcgtcgta
      841 ggcggagacc acgacgaccg gcacgctcga aacctcgggc tttttgagct gctcgagccg
      901 aaacgtgcgg ccatccatca cgggcatcat caggtcgagc acgatcatgc aagggcaggt
      961 gccgagccgg tcgagcttct cgagcgcctc gcgcccgtgt tccgccccaa tcgctgcata
     1021 gccgtagctc tcgagcaact cgacgagcgt ctcgcgcacg tcttgattgt cctcgacgac
     1081 taggacgtaa tgccccggcg tgggcgcgtg ttcggattgg ggttgcatcg gactacgcag
     1141 cagtcgtccc ggtgggaagg cgtaccatga agcgtgcccc gcggccggga gccgtgtcaa
     1201 cggagaccga tccgccgtgc gcgtctgcga tctcgcgcac gacgtacaga ccgagcccga
     1261 ggccgctgaa ttcgctcgtc gcgcaggcac gttcgaagcg gtcgaagatg cgctccgcgt
     1321 ccgccttcgc gatgcccggg ccgtgatcgg aaacctcgat cacgaccgcg ccgccgtcgc
     1381 aagttgcccc gacgtgcacc ggcgcgccgg gcgcgtaagt gaaagcgttc cagacgagat
     1441 tcgtgactag ttgctcgagg cggcggcggt cccaattgcc gacgagcggc ccttcgaggc
     1501 tcgtcgtgag ctcacagccg gcgagctccg cgggtttcct gagcgtgtcg aggcacgcgc
     1561 cgagcgcgcg cgagagctcg aaggtctcgc gaaacagggt aaaactatcg gttgcgatgc
     1621 gggtcgcttc gagcaacgag tcgacgagcc gcgtgagctg gctcgtgccg cggcgggcgc
     1681 gggagagcgt tctggcgagc gacggctcgc ggctcgacag ctgcgcttcg agtgcgtcga
     1741 gctggagctc gacgacggcg agcggtgtcc gtagctcgtg ggaggcgacg gacaagaatt
     1801 cgtcgcgcac gcgcacggcc tcttccgcct gagcgcgccg gagccgctcc tcctcgagcc
     1861 ggcgccgctc ggtgagatcg tgcgtgacct tcgcgaagcc cgtgagcgta ccgcgctcgt
     1921 cgtacagggc cgtgatcacg acgttggccc agaacgtcgt gccgtccttg cgcacgcgca
     1981 gcccctcggt ctcgagccga ccttcgctcg ccgcgatggc gagctcgcgt tcacagaggc
     2041 cgctcgttac gtcgtctcgt ccgtaaaacg tcgagaagtg ttggccgatg atttcgcgcg
     2101 cctggtagcc tttgatgcgc tcggctcccg cgttccaggt cgcgacgcgc ccgtgcgtat
     2161 ccaacatgaa aatggcgtaa tctttcacgc tttccacgag caggcggaac ttttcgcccg
     2221 tctcgccgag cgtcatggag cgctgccagg cgtcgaaatc gtcgtcgtcg ggagcggcgc
     2281 tcaacgcacc ggggcgactc ggcggcgcgc gtagggctgc ccggcgcggc aacgtcaggg
     2341 tgaaggtcgt gccggtctcc gggctggatt gcgcctcgag cgaaccgccg tgggcgcgag
     2401 cgagttcgtg cgcgatgaag agcccgaggc cgagtccgga gccaccgtgc ttgcgtgaag
     2461 cgttgtcctc gaacggcgcg aacaggcgcc gcaggcgttc gctcggaa
//
LOCUS       DATIML010001126         3395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3702129, whole genome shotgun sequence.
ACCESSION   DATIML010001126 DATIML010000000
VERSION     DATIML010001126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3702129"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VLJ38_19375"
     CDS             <1..541
                     /locus_tag="VLJ38_19375"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU41753.1"
                     /translation="TYLAAYALGARDSEALRPELRELFASDDPVLRAHVALGLGRSEQ
                     PSAVGMLADAYRDEADAGVRRAIVRALTVRGEPARRRTLAFAAELEPDDDARTLARSA
                     LGGTPRPGAGPPNSAWLRLRGASEPSFATVTAADGLARPFAADPDGTVTVFGLPAGDI
                     ELTLGVAAPGRVPPVKGKP"
     gene            538..1026
                     /locus_tag="VLJ38_19380"
     CDS             538..1026
                     /locus_tag="VLJ38_19380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSU41754.1"
                     /translation="MSQIDVRRALASDIPAAAEQAGRLARLHHDTDPARFFLPERVVE
                     GYTWWFERVVKDPEAALLVAKVGGAVAGYAYGALEERDWNLLLDAHGAIHDVFVADDH
                     RRHGIGEALLKAMIAELEGLGAERIVLSTMPTNLPAQRLFGRFGFRVTFLEMTRNRPA
                     PT"
     gene            1135..1407
                     /gene="xseB"
                     /locus_tag="VLJ38_19385"
     CDS             1135..1407
                     /gene="xseB"
                     /locus_tag="VLJ38_19385"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HSU41755.1"
                     /translation="MSTRKKQSPPGDNGQNGEAPFEASLERLTDIVDRLENGELGLEE
                     SLALFEEGVRLARHAQERLDAAEKRVEELIAVDQDGEPVSRELEPE"
     gene            1423..2154
                     /locus_tag="VLJ38_19390"
     CDS             1423..2154
                     /locus_tag="VLJ38_19390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HSU41756.1"
                     /translation="MAERAAALIVGNELLSGKVAEANLVELARTLRPLGVSLSRVSIL
                     PDELDVLAREIERLTREYPLVFTSGGVGPTHDDITVDAVAAAFGVAPVEEPTLAGLIR
                     RAYGERCTPAHLRMALVPAGAELATSPDGAWPTPVFHNVWMLPGVPEVFREKLGTVRA
                     WVSGPSPFVSLAVYTKLDEPSLKALIDGVVERHPDVEVGSYPRWFEPSYKTKVTFDAR
                     DGAAVERATRDFVEHLPDGALLRVE"
     gene            complement(2179..3030)
                     /locus_tag="VLJ38_19395"
     CDS             complement(2179..3030)
                     /locus_tag="VLJ38_19395"
                     /inference="COORDINATES: protein motif:HMM:NF021364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding domain-containing protein"
                     /protein_id="HSU41757.1"
                     /translation="MTREARASLELLEHWLVAVSTDPEGAARGVERAAARYGAGTLAE
                     LETVVTPGPRLSALERLGIYNDGYFARLVECLRDDYPAVAYALGADVFERVARDYIHT
                     HPSRSPSLNGYGANFTTFLRTRSEPWVHWLVELARLEWALVQVIHAETGTALAPNALA
                     EVPPDTWPRVRFVSKPALELLDVAYPVNAFYQAFRDELEPAAPAPAASSLVVHRVGLV
                     VYRLELEPAMRALLGDLLAGKTLGSALGELERRLAPGELASAQANLSAWFGAWVAAGF
                     FTALELA"
     gene            complement(3027..>3395)
                     /locus_tag="VLJ38_19400"
     CDS             complement(3027..>3395)
                     /locus_tag="VLJ38_19400"
                     /inference="COORDINATES: protein motif:HMM:NF016970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HSU41758.1"
                     /translation="EWEFMAALAEEADVGLLLDVNNVLVSAKNHGFDPETYLAAIPME
                     RVVQIHVAGHTDHGTHAIDTHIGPVPDAVWQLYARARALGADAAVLLEWDAEIPPFEI
                     VHADARRAERALAVGEAAGF"
BASE COUNT          527 a         1201 c         1168 g          499 t
ORIGIN      
        1 gacctacctc gccgcgtacg cgcttggcgc gcgcgattcg gaggcgctcc ggcccgagct
       61 gcgcgagctc ttcgcgagcg acgacccggt cctacgcgct cacgtcgcgc tcggcctcgg
      121 acgcagcgaa cagccgagcg ccgtcgggat gctcgctgac gcgtatcgcg acgaagcgga
      181 cgcgggtgtc cggcgcgcga tcgtgcgggc gctcaccgtg cgcggcgaac cagctcgccg
      241 ccgaaccctc gccttcgccg ccgagctcga gccggatgac gacgctcgca ccctcgctcg
      301 gagcgcgctc ggcggcacgc cgcggccagg cgccggacct cccaactcgg cgtggctacg
      361 cttgcgcgga gcgagcgagc cgagtttcgc gacggtcacg gcggccgacg gtttggcgcg
      421 acccttcgct gccgatcccg acggaaccgt caccgtcttc ggcttgcccg cgggtgacat
      481 cgagctcacg ctcggagtcg cggcgccggg gcgtgtgccg ccggtcaaag gaaagccatg
      541 agccaaatcg acgtgcgccg cgcgctcgca agcgacattc ccgccgccgc cgagcaggcg
      601 ggacgactcg cgcggctgca tcacgacacc gacccggcgc gcttcttttt gccggagcgc
      661 gtcgtcgagg ggtacacgtg gtggttcgag cgcgtggtca aagatcccga ggcagcgctg
      721 ctcgtcgcga aggtgggagg agcagttgcc ggttacgctt atggagctct cgaggagcgc
      781 gactggaacc tattgctcga cgcgcacgga gcgatccacg acgttttcgt ggccgatgac
      841 catcggcgtc acggcatcgg cgaagcactc ctcaaagcca tgatcgccga gctcgagggg
      901 ctcggcgccg agcgcatcgt gctctcgacc atgccgacca atctgccggc ccagcgcctg
      961 ttcgggcgtt ttgggttccg cgtcaccttc ctcgagatga cccgcaaccg ccccgcgccc
     1021 acctgacagc ggccgtcgag cgtccggcgc cctcgatccg tcgccccgcg tgcttcacgt
     1081 ggcgcacggg cttgcgccac ggcggcacgg atgggagaag tcttccggtc cggcatgagt
     1141 acgcgcaaga agcagtcgcc ccccggcgac aacgggcaaa atggcgaagc gcccttcgag
     1201 gcgtcgctcg agcggctcac cgacatcgtc gaccgcctcg aaaatggcga gctcgggctc
     1261 gaggagtcgc tcgcgctgtt cgaagaaggc gttcgccttg cccgtcacgc gcaggagcgg
     1321 ctcgatgccg ccgaaaagcg cgtcgaagag ctcatcgccg tcgatcagga cggcgagccc
     1381 gtcagtcgcg agctcgaacc cgagtaggcc atgcagcgcg tcgtggcaga gagagcggcc
     1441 gcgctcatcg tcggcaacga gctcttgagc ggcaaggtcg ccgaagcgaa cctcgtggag
     1501 ctcgcccgca cgttgcggcc gctcggcgtg agtctttcgc gcgtgagcat cttacccgac
     1561 gagctcgacg tgctcgcccg cgagatcgaa cgtctcaccc gcgaatatcc gctcgtcttc
     1621 acgagcggcg gcgtcggccc cacgcacgac gacatcaccg tcgacgccgt cgcggcggcg
     1681 ttcggcgtgg cgcccgtcga agagccgacg ctcgccgggc tgatccggcg cgcttacggc
     1741 gaacgctgca cgccggcgca cctgcgcatg gcgctcgttc cggccggcgc cgagctcgcc
     1801 acctcgccgg acggcgcctg gccgacaccc gtcttccaca acgtctggat gctccccggc
     1861 gtgcccgagg tgtttcgtga aaagctcggg acggttcggg cctgggtgag cgggccgtcg
     1921 cctttcgtct cgctcgccgt gtacacgaag ctcgacgagc cgtcactcaa agcgctcatc
     1981 gacggcgtcg tcgagcgcca cccggacgtc gaggtcggct cttatccgcg ctggttcgag
     2041 ccgagctaca agacgaaagt cacgttcgac gcgcgcgacg gcgccgccgt cgaacgcgcc
     2101 acgcgcgact tcgtcgagca cttgccggac ggggcgctcc tgcgggtgga gtaacgcacc
     2161 gggcgcgccg gagcgggctc aagcgagctc gagcgccgta aagaagcccg ccgcgaccca
     2221 cgcgccgaac cacgccgaca aattcgcctg cgcgctcgcc agttcgcccg gcgcgagccg
     2281 tcgctcgagc tcgccgagtg cgctgccgag cgtcttgccc gccagtaaat ccccgagcaa
     2341 agcgcgcatc gcgggttcta gctcgagccg atacacgacg agccccacgc gatgaacgac
     2401 gagcgagctc gccgccggag cgggcgctgc cggctcgagc tcgtcgcgga acgcctgata
     2461 gaaggcgttg accggatagg ccacgtcgag gagctcgagc gcgggtttcg acacgaagcg
     2521 cacgcgcggc caagtatcgg gcggcacctc ggcgagcgcg ttcggtgcga gcgccgtgcc
     2581 cgtctcggcg tgaatcacct ggacgagcgc ccactccagc cgggcgagct cgaccagcca
     2641 gtgcacccac ggctcgctgc gcgtgcgaag aaacgtcgtg aaattggcgc cgtagccgtt
     2701 caagctcggc gaccgcgagg ggtgcgtgtg gatgtaatct cgcgcgacac gctcgaatac
     2761 gtcggcgccg agcgcgtagg cgaccgccgg gtaatcatcg cgcaagcatt cgacgagacg
     2821 cgcgaagtag ccgtcgttgt agatgccgag tcgctcgagc gccgacaagc gcgggccggg
     2881 cgtgaccacg gtttcgagct cggcgagggt gccagcgccg tagcgcgcag cggctcgttc
     2941 cacgcctcgc gccgcgccct ccgggtcggt gctcacggcg acgagccaat gctcgagcag
     3001 ctcgagcgac gctcgggctt cgcgcgtcaa aagcccgctg cttccccgac ggccagcgcg
     3061 cgctcggcgc gccgtgcgtc ggcgtgaacg atctcgaacg gcgggatctc ggcgtcccac
     3121 tcgagcagca ccgctgcgtc ggcgccgagc gcgcgcgctc gcgcgtagag ttgccagacg
     3181 gcatccggca ccggtccgat gtgcgtgtcg atggcgtgcg tgccgtgatc ggtgtggccg
     3241 gcgacgtgga tctggaccac gcgctccatg gggatggcgg ctaggtacgt ctcggggtcg
     3301 aaaccgtgat ttttggcact cacgagcacg ttgttcacgt cgagcaagag cccgacatcg
     3361 gcttcttcgg cgagcgctgc catgaactcc cattc
//
LOCUS       DATIML010001127         1590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1103389, whole genome shotgun sequence.
ACCESSION   DATIML010001127 DATIML010000000
VERSION     DATIML010001127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1103389"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VLJ38_19405"
     CDS             <1..290
                     /locus_tag="VLJ38_19405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41759.1"
                     /translation="VTSTSFGGSLAFYLHRGPATFRFGGGLRAGVLAFSDGPSLAAWG
                     WPMFVSSLTLRWGPAVLDLGGETGLVDVLVHHNQGLRGVWVSGQAGLGFVL"
     gene            452..1093
                     /locus_tag="VLJ38_19410"
     CDS             452..1093
                     /locus_tag="VLJ38_19410"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41760.1"
                     /translation="MKPTKAPNDDMPRDQPAVSLVRLVAPSPEETPLAPSGPAPAGLR
                     SEPSLEATLDLDGLFRRYAPYVAAIAHRLLGRDEEVDDTIQEVFVAAVRGVHAVRDPA
                     AIRGWLARVTVRVARQRLRKRRLRVFLGLDEPVVYDSIVDHSASAEQRALLARVYGIL
                     DRLPPNERIAWSLRHIEGEPLENVASLAGCSLATAKRRISAAAQKIEEAFADV"
     gene            1086..>1590
                     /locus_tag="VLJ38_19415"
     CDS             1086..>1590
                     /locus_tag="VLJ38_19415"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HSU41761.1"
                     /translation="MSELARRIEQASAHVEPAWSSDREARLRVGVGRGLERVRRQRIT
                     LISVLGACTLLLGFFLGRQPLMTPRMALADAPQPSLVQLPDGSSVSGRSNDARVETVA
                     VSPTGVSLRLQAGSARFSVTPNANRPFRVMARDVTVTVLGTVFSVTLDERGVRVDVER
                     GRVRVEAP"
BASE COUNT          225 a          533 c          561 g          271 t
ORIGIN      
        1 acgtcaccag cacgagtttc ggcggctcac tcgcgttcta tctccaccgc ggcccggcga
       61 cctttcggtt tggtgggggg ctgcgggcgg gggtactcgc gttttcggac gggccgagcc
      121 tcgccgcgtg gggctggccc atgttcgtga gctcgctgac gctgcgctgg ggtccggccg
      181 tgctcgatct cggcggagaa acagggctcg tggacgtgct cgtgcatcat aatcaaggcc
      241 tgcgcggggt ctgggtgagc gggcaggcag gactcggatt cgtgctgtga gggcggatgc
      301 ctgaacgctt gaacaaccgt cagacgggtg ggagcggaag cgtcatgtcg tatcggtgca
      361 acgtgagccg gcgccgggct cacgctgaaa gaaccgtggg gtttgctgcg gcgcgctatg
      421 cttggcttac tggcctgagc ctttcctcac catgaagccc actaaggcac caaacgacga
      481 catgccgcgc gatcaacccg ccgtctcctt ggtgcgccta gtcgctccga gccccgagga
      541 aacacccctc gcgccgagtg ggccggcgcc ggcgggtctc cggagcgagc cgtcgctcga
      601 ggccacgctc gatctcgacg ggctcttcag gcgctatgcc ccgtacgtcg ccgccatcgc
      661 gcaccggctg ctcggccgcg atgaagaagt cgacgacacg attcaagaag tgttcgtggc
      721 tgccgtacgg ggcgtccacg ccgtacgcga ccctgcagcg atccgcggtt ggctcgcccg
      781 cgtgaccgtg cgtgttgcgc ggcaacggct ccgcaagcgg cgcttgcgcg tgttcctcgg
      841 cctcgacgag ccggtcgttt acgacagcat cgtcgatcat agcgcgtccg ctgaacagcg
      901 cgctctcctc gcgcgcgtct acggcatcct cgatcgcttg ccgccgaacg agcgcattgc
      961 ctggtcgctg cgccacatcg agggcgaacc gctcgagaac gtggcgtcgc tcgccggctg
     1021 ctcgcttgcg accgccaagc gccgcatctc cgctgccgcc caaaaaatcg aggaggcgtt
     1081 cgccgatgtc tgagctagcc cgccgcatcg agcaagcgag cgctcacgtc gagccggcgt
     1141 ggagcagcga tcgcgaagcg cgcctgcgcg tcggcgtggg ccgtgggctc gaacgcgtgc
     1201 gacggcagcg gatcacgcta atcagcgtgc tcggcgcttg cacgctgctg ctcggcttct
     1261 tcctcggccg tcagccgtta atgacgccac gcatggcgct cgccgacgcg ccgcagccga
     1321 gcctcgtgca gttgcccgac gggtcgagcg tgagcgggcg ttcgaacgat gctcgagtcg
     1381 agaccgtcgc ggtgagcccc acgggcgtga gcttgcggct gcaggccggc tcggcgcgct
     1441 tctccgtgac gccgaacgcg aatcgcccgt tccgcgtgat ggcgcgcgac gtgacggtga
     1501 cggtgctcgg cacggtgttc agcgtgacgc tcgacgaacg gggcgtgcgc gtggacgtcg
     1561 agcgcggtcg cgtgcgggtc gaggctccgc
//
LOCUS       DATIML010001128         4191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_234310, whole genome shotgun sequence.
ACCESSION   DATIML010001128 DATIML010000000
VERSION     DATIML010001128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4191
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234310"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VLJ38_19420"
     CDS             <1..807
                     /locus_tag="VLJ38_19420"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU41762.1"
                     /translation="GSEEVRPVDDVPRRVIVPLTGKARIQAGERLYQTSKDQTLWLKA
                     KDLDIVAPPPEWPEVAEHGEKWIDICITQQTLVLYQGKKPYYATLVSTGRDRLGDPKE
                     TLSTPRGSFKLQSKHVAAAMDSEENSAVSGGMRAHASTHSENAKATVERLKRARASGE
                     DLDEDDKRRLLNIDKGRDPEYGITVRRGAAGFELRDVPWIQYFASGYALHGAYWHDVF
                     GVPRSHGCVNLSPIDARVVFRWTDPPVPEGWHGINVGSEMGEGTAVIIRE"
     gene            complement(870..1916)
                     /gene="argC"
                     /locus_tag="VLJ38_19425"
     CDS             complement(870..1916)
                     /gene="argC"
                     /locus_tag="VLJ38_19425"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HSU41763.1"
                     /translation="MKRYRAGVLGGSGFAGAELVRRLLVHPEVELVRVCAADHVGEPL
                     ASALPHLEGRTNLVFENPPPAAAVDGLDVVLMGLPHGASIEVVERVIDRDVRVIDMSG
                     AFRLKDQSAYERFYGGPHARPELLERFVYGLPELNRDAIRGARFVSSPGCFATSIELM
                     LLPFAKRGLLRGSVQVVGVTGSSGSGVTPSVTTHHPTRSVNLRAYRPLSHQHAPEIVA
                     ALASAGADIELDFVPVSAPLARGIFATAFFQVPADTSAEALLEIPRAAYAAEPFVRVP
                     QRRLPEVVAVAGSNYAEVGVVAGAQRDGVQLVTAFAALDNLVKGGAGQAIQNLNLMLG
                     LPETLTLEDPGGYP"
     gene            complement(1913..3652)
                     /locus_tag="VLJ38_19430"
     CDS             complement(1913..3652)
                     /locus_tag="VLJ38_19430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41764.1"
                     /translation="MSVKFVGFIAALAFVLGSVRPALAQMGPSSGGMGMPGFGGGPGP
                     SGGGGAKKPKKKDPNEPETHAATGAGDEVVAPGGEPTLPEKPLEVSKRTERHIGSDLD
                     PTTEEQGRDRVTTRRFYGLYYSETSGKYRFQLAFPVWANRTQPSRTNPAVTDSASLYA
                     ALFYHRRSAEHADDILFPLVWNLNDRVAKSRTTIVGPLVNRVAPFENDNWLAPLYFTG
                     KRKNGGYTLIPPLLTYTNTDGRSGFNLVGPMFCSWQGGGSCDARTAQKLDFGVVPFYF
                     FGQDAETKYETVPPLLHYYHYNDRTLGWTNIWGPYYREHTQKRDMLHLLPLYFSIDGK
                     NEHHTTFLPFFHYGYDRNSWLFANPLFLMAEGHHSEKTFATYLYARYRGRTSLDMVTP
                     LYWRYRDQDIDLDQHLLFPFWFSRTSPRESTHVLFPFYGRSIRYGISDTMFVTPLFQH
                     THDVRGWSTNLHPIFYIGRDATSTHTIVAPIFWDFADPKSRATVVAPIFWRFASDKDI
                     TQLVGNVYYHETRKSSGNDWEVHIFPAFSYGKTPNGHWWNLLYGLAGYTHRGNTVQVR
                     ALWIPITLSGEQK"
     gene            complement(3649..>4191)
                     /locus_tag="VLJ38_19435"
     CDS             complement(3649..>4191)
                     /locus_tag="VLJ38_19435"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HSU41765.1"
                     /translation="YEVSPGLVRGLDYYTRTLFEIQTSGAEIGSQNALLGGGRYDAMV
                     KELGGPDVPAIGFALGLERVLLALPEAAPAATARCFIAPLGERARLESLVIARELRAA
                     GIAAEADTRAGSLKSLLRRADGLGARLCLVLGDDEIGRGIVMLKDLAARSQIEVPRAE
                     LVARARELLASAPPAGGPAA"
BASE COUNT          721 a         1345 c         1471 g          654 t
ORIGIN      
        1 gggagcgaag aggtgcggcc cgtggacgac gtgccgcgcc gggtcatcgt gccgctcacg
       61 ggcaaggcac gcatccaagc cggcgagcgc ctctaccaga cgagcaagga ccagacgcta
      121 tggctcaagg ccaaggacct cgacatcgtc gcgccgccgc ccgaatggcc cgaggtcgcc
      181 gagcacggcg aaaagtggat cgacatctgc attacccagc agacgctggt cctctaccag
      241 gggaaaaagc cgtactacgc gacgctcgtc tcgacggggc gtgatcgctt gggcgacccg
      301 aaggagacgc tttcaacacc gcgcggctcc ttcaagctgc agagcaagca cgtggcggcg
      361 gcgatggatt ccgaggaaaa ttcagcagtt tccggcggaa tgcgcgctca cgccagcacc
      421 catagcgaaa atgccaaggc cacggtcgag cgcctcaagc gcgcacgcgc ctccggcgag
      481 gatctcgacg aagacgacaa gcgccgcctg ctcaacatcg acaaggggcg cgaccccgaa
      541 tacggcatca cggtccgacg cggcgccgca ggcttcgaac tgcgcgacgt gccgtggatt
      601 cagtacttcg cgtccggcta cgcgctgcac ggcgcctatt ggcacgacgt cttcggcgtt
      661 ccgcgcagcc acggctgcgt gaacctttcg cccatcgacg cgcgcgtcgt cttccgctgg
      721 accgatccgc ccgtccccga aggctggcac ggcatcaacg tcggcagcga aatgggcgag
      781 ggcaccgccg tcatcatccg cgagtgacac gcggctcagc cggcttcacg gcgggcgcgc
      841 gcgagcaggc cccctacagc gagcactcgt tacgggtagc cgcccggatc ctcgagcgtg
      901 agcgtctcgg gcaggccgag catcagattc aggttttgaa tcgcctggcc ggcgccgccc
      961 ttcacgaggt tgtcgagtgc ggcgaaagcg gtgacgagct gcacgccgtc gcgctgggcg
     1021 ccggcgacga cgccgacttc ggcgtagttc gagcccgcga cggccacgac ctcgggcaaa
     1081 cggcgctgtg gcacgcggac gaagggctcg gcggcgtacg cggcgcgcgg tatttccaag
     1141 agcgcctcgg ctgacgtgtc cgcgggcacc tggaagaacg cggtcgcgaa gatgccgcgc
     1201 gcgagcggcg ccgagacggg cacgaaatcg agctcgatgt ccgcgccggc tgatgcgagc
     1261 gcggccacga tctcgggcgc gtgctggtgt gagagcgggc ggtacgctct gaggttcacc
     1321 gagcgcgtgg ggtggtgcgt cgttacgctc ggcgtgacgc cgctaccgct cgagcccgtg
     1381 acgcccacga cctgaacgga gccgcgcaag aggccgcgct tggcgaaggg caacagcatg
     1441 agctcgatgc tcgtcgcgaa gcagccgggc gatgaaacga agcgggcccc gcggatggcg
     1501 tcgcggttga gctcgggcag gccgtacacg aagcgctcga gcagctccgg gcgcgcgtgc
     1561 gggccgccgt agaagcgctc gtacgcgctc tgatccttga ggcggaaggc gccggacatg
     1621 tcgatcacgc gcacgtcgcg atcgatcaca cgctccacga cttcgatgct cgcgccgtgc
     1681 ggcaagccca tgagcacgac atcgagccca tcgacggcgg ccgcgggcgg cgggttttcg
     1741 aagaccaggt tcgtgcgacc ctcgaggtgc ggcagcgccg acgcgagcgg ctctcccacg
     1801 tgatcggccg cgcagacgcg cacgagctcg acctcggggt gcacgagcaa gcgacgcacg
     1861 agctcggcgc cggcaaagcc ggacccgccg agcacgcccg ccctgtagcg cttcacttct
     1921 gctcgccact caacgtaatg gggatccaga gcgctctcac ctgcacggtg ttaccgcggt
     1981 gcgtgtaacc cgcaaggccg tagagcaggt tccaccagtg cccgttgggg gttttgccgt
     2041 agctgaaagc ggggaagata tggacttccc agtcgttgcc cgaggacttg cgcgtctcgt
     2101 gatagtagac gttgccgacg agttgggtga tgtccttgtc gctcgcgaag cgccagaaga
     2161 tgggggccac gacggtcgcg cgcgatttcg gatcggcgaa atcccagaag attggcgcga
     2221 cgatggtgtg ggtgctcgtc gcgtcgcggc cgatgtagaa aatcgggtgg agattggtgg
     2281 accagccgcg cacgtcatgg gtgtgctgga agagcggcgt cacgaacatc gtgtcgctga
     2341 tgccgtagcg gatgctgcgc ccataaaacg ggaacagcac gtgcgtcgac tcgcgcgggc
     2401 tcgtgcgcga aaaccagaac gggaacaaga ggtgctgatc gagatcgatg tcctgatccc
     2461 gatagcgcca gtagaggggc gtcaccatgt cgagtgacgt tcggccgcgg tagcgcgcgt
     2521 aaaggtaagt cgcgaacgtc ttttccgagt ggtgcccctc cgccatcaag aacagcggat
     2581 tggcgaagag ccaggagttt ctgtcgtacc cgtagtgaaa gaaggggaga aacgtcgtgt
     2641 ggtgctcgtt cttgccgtcg atgctgaagt acagcggcaa gaggtgcagc atgtcgcgct
     2701 tctgcgtgtg ctcgcggtag tacgggcccc agatgttggt ccagccgagg gtgcgatcgt
     2761 tgtagtggta gtagtgaagg agcggcggca ccgtctcgta cttggtctcc gcgtcctgcc
     2821 cgaagaagta gaagggcacg acgccgaaat cgagcttctg cgccgtgcgc gcgtcgcagc
     2881 tgcctccacc ttgccaggag cagaacatcg gcccgacgag attgaagccg ctgcggccgt
     2941 ccgtgttcgt gtacgtgagc agcggcggga tcagcgtgta gccgccgttc ttgcgcttgc
     3001 ccgtgaagta gagcggcgcg agccagttgt cgttttcgaa cggcgccacg cggttgacga
     3061 gcggccccac gatcgtcgtg cggctcttgg cgacgcgatc gttcagattc cagacgagcg
     3121 ggaagaggat gtcgtcggcg tgctcggcgc tgcgccgatg gtaaaagagc gcggcgtaga
     3181 gcgacgcgct gtcggtgacc gccgggttcg tgcgcgacgg ctgcgtgcgg ttggcccaaa
     3241 cggggaaagc gagttggaag cggtacttac cgctcgtttc cgagtagtag aggccgtaga
     3301 agcgccgcgt cgtcacgcga tcgcggccct gctcttcggt cgtcggatcg agatcgctgc
     3361 cgatgtggcg ctcggtacgc ttcgagacct cgagcggttt ttccggcagc gtcggctcac
     3421 cgcccggtgc gaccacttcg tcgccggcgc ctgtcgcggc gtgggtctcc ggttcgttcg
     3481 ggtccttctt tttcggcttc ttcgcgccgc cgccaccgct cggtccgggg ccgccgccga
     3541 agcccggcat acccatcccg ccgctgctcg ggcccatctg cgcgagcgcg ggacgcaccg
     3601 agccgagcac gaacgcgaga gcggcgatga agccgacgaa ttttacactc acgcggctgg
     3661 acccccggcc ggcggagcgc tcgcgagcag ctcacgggcg cgcgcgacga gctcggcccg
     3721 aggcacttcg atctgcgaac gtgcggcgag atccttcagc atcacgatgc cccgaccgat
     3781 ctcgtcgtcg ccgagcacga ggcaaaggcg cgcaccgagt ccgtccgctc gacggagtaa
     3841 gctcttgagc gagccagcgc gcgtatcggc ttcggccgcg attcccgctg cgcggagctc
     3901 acgcgcgatg acgagcgact cgagccgggc gcgctcgccg agcggcgcga tgaaacagcg
     3961 tgcggtcgcg gcgggcgccg cttcgggcag cgcgagcagc acgcgctcga ggccgagcgc
     4021 gaagccgatg gccggcacgt cgggcccgcc gagctctttc accatcgcgt cgtagcgacc
     4081 gccgccgagc agcgcattct gcgagccgat ctcggcgccg ctcgtctgga tctcgaagag
     4141 tgtgcgggtg taatagtcga ggccgcgcac gaggccgggg ctcacctcat a
//
LOCUS       DATIML010001129         2222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4278715, whole genome shotgun sequence.
ACCESSION   DATIML010001129 DATIML010000000
VERSION     DATIML010001129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4278715"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VLJ38_19440"
     CDS             complement(<1..383)
                     /locus_tag="VLJ38_19440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41766.1"
                     /translation="MKVQRQSLHGAAVPAPSEEFALGESPPPARTEPNRRARGRTPPE
                     TGPSLSERLLSAFKLCVGLAVVVAASTAVAYSLHRYALTTTRFGIQNVELVGAKRLST
                     DEVRALGGMEIGKNLFAFDTRAAEER"
     gene            complement(380..1777)
                     /gene="murC"
                     /locus_tag="VLJ38_19445"
     CDS             complement(380..1777)
                     /gene="murC"
                     /locus_tag="VLJ38_19445"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HSU41767.1"
                     /translation="MFRGRVRHVHFIGVGGIGMSGLAEILRTLEFDVSGSDLREGENT
                     RALARIGVRIDVGHRAENVRGADVIVYSSAIDNQNPEIVEARLLGVPVISRAEMLAEL
                     MRVKYGIAIAGSHGKTTTTSLVATILRAAGFDPTVVVGGRMAALGSNARLGAGDLLVA
                     EADESDGSFLRLTPTIAVVTNIDPEHLDFYGSHEALKEAFVEFTEKVPFYGLAVLCLD
                     HPHVQELLPRIKRRHVTYGFSPQADYHARSVAMKGLSASFVAYRRSEPLGEFTLRMPG
                     RHNVLNTLAAIAVADELEVPLDVTKAALASFNGVARRFTIVAEVSGISLVDDYGHHPA
                     EVLATLAAARGAYPGRVIVAFQPHRYSRTELLFDEFTRAFNNADVLFLVDIYAAGEKP
                     IAGVSAERLAQGIAEHGHHAVSHVKDRATLPDQIARIAEPGDVVIALGAGDINKILPA
                     IAAELNARFAQGGSA"
     gene            complement(1780..>2222)
                     /locus_tag="VLJ38_19450"
     CDS             complement(1780..>2222)
                     /locus_tag="VLJ38_19450"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU41768.1"
                     /translation="MPAALAAADLVVGRSGAGALSEICAVGRPAVFVPYPFAAGDHQR
                     VNAEAVERAGGAICVPHAQASAERLAQELAALASDRARLSAMAARAREFGRPEAARAV
                     ALDLLELAGLPLREADPRARGANGSSPHGSVFFAPAEPRREVSV"
BASE COUNT          349 a          747 c          795 g          331 t
ORIGIN      
        1 cgctcctcgg cggcgcgcgt atcgaaagcg aacagattct tgccgatttc catgccgccg
       61 agggcgcgca cctcgtccgt cgatagccgc ttggcgccga cgagctcgac gttctggatg
      121 ccgaagcggg tcgtcgtgag cgcgtagcga tgcaggctgt aggcgaccgc cgtcgaagcg
      181 gcgacgacca cggcgagtcc gacgcagagc ttgaacgccg aaagcagccg ctccgacaag
      241 ctcgggcccg tttcgggcgg ggtcctgccg cgggcgcgcc ggttgggttc cgtgcgtgca
      301 ggcggcggac tttcgccgag cgcaaactct tcgctcggcg cggggacggc ggcgccgtgc
      361 aggctctgtc tctgcacctt catgcggaac ctccctgcgc gaaccgagcg ttgagctcgg
      421 ccgcgatggc gggcaagatc ttgttgatgt cgcccgcgcc gagcgcgatg acgacgtcgc
      481 ccggttcggc gatgcgcgcg atctgatcgg gcaaggtcgc gcgatccttc acgtggctca
      541 cggcgtggtg gccgtgctcg gcgatgcctt gcgcgagccg ctcggccgaa acccccgcga
      601 tcggcttctc cccggccgcg tagatatcga ccaaaaagag cacgtcagcg ttgttgaagg
      661 cacgcgtgaa ctcgtcgaac aagagctcgg tgcgcgagta acggtgcggt tggaaggcga
      721 cgatgacgcg gccggggtag gcgccgcgtg ccgccgcgag cgtcgccagc acctcggccg
      781 ggtggtggcc gtaatcgtcg acgagcgaga tccccgacac ttccgccacg atcgtgaagc
      841 ggcgcgcgac gccgttgaac gaggcgagcg ccgctttggt cacgtcgagc ggcacctcga
      901 gctcgtcggc gaccgcgatc gcggcgagcg tgttgagcac gttgtgccgg cccggcatgc
      961 gcagcgtgaa ctcgccgagc ggctcgctcc gccggtaggc gacgaacgac gccgagaggc
     1021 ccttcatcgc gacggagcgc gcgtggtagt cggcctgcgg cgaaaagccg tacgtcacgt
     1081 gccggcgctt gatgcgcggc aagagctcct gcacgtgcgg gtggtcgagg cagagcacgg
     1141 cgaggccgta gaacggcact ttttccgtga actccacgaa cgcttctttg agcgcctcgt
     1201 ggctgccgta gaaatcgagg tgctccggat cgatgttggt gacgacggcg atcgtcggcg
     1261 tgaggcgcag gaacgagccg tcgctctcgt cggcctcggc cacgagcaga tcgccggccc
     1321 ccagacgagc gttgctgccg agcgccgcca tccggccacc gacgaccacc gtcgggtcga
     1381 agcccgccgc gcgcaggatc gtggcgacga gcgaagtggt cgtggtctta ccgtgcgagc
     1441 cggcgatggc gatgccgtat ttcacgcgca tgagctcggc gagcatttcc gcgcgcgaga
     1501 tcacggggac gccgagtaag cgcgcctcga cgatttctgg gttttggttg tcgatggcgc
     1561 tcgaatacac gatgacgtcg gcgccccgga cgttctcggc gcggtgaccc acgtcgatgc
     1621 gcacgccgat gcgcgcgagc gcgcgcgtgt tttcgccctc gcgcaaatcg gagcccgaca
     1681 cgtcgaactc gagcgtgcgc aggatttcgg cgagaccgct catgccgata ccgccgacac
     1741 cgatgaaatg cacgtgacga acgcgtccgc ggaacatggc taaacgctga cctcccgccg
     1801 cggctcggcc ggcgcgaaaa agacggagcc gtggggcgaa gagccgttcg ccccacgggc
     1861 gcgcgggtcg gcttcgcgga gcggcaggcc ggcgagctct agcaggtcga gcgccacggc
     1921 tcgcgccgct tccggccgtc cgaactcgcg cgctcgcgcg gccatcgccg aaagccgcgc
     1981 tcgatcgctc gcgagcgcag cgagttcttg cgccaaacgc tcggcgctcg cctgtgcgtg
     2041 cggcacgcaa atggcgccgc ccgcgcgctc gacggcctcg gcgttgacgc gctggtggtc
     2101 gccggcggca aacgggtacg gcacgaacac ggcagggcga cccaccgcgc aaatttcact
     2161 gagcgcgccg gcgcccgaac gaccgacgac cagatcggcc gcggcgagtg ccgccggcat
     2221 gt
//
LOCUS       DATIML010001130         4301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1395174, whole genome shotgun sequence.
ACCESSION   DATIML010001130 DATIML010000000
VERSION     DATIML010001130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395174"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /gene="ruvC"
                     /locus_tag="VLJ38_19455"
     CDS             <1..558
                     /gene="ruvC"
                     /locus_tag="VLJ38_19455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HSU41769.1"
                     /translation="ELGARAATWYSFAVIVLGVDPGTRYLGWGVVERQGNRLRHLGHG
                     VLTLPPTRPLAERLNLIDQGLSDVIARFKPEASSVESLFFHKDAQAAAKLGHARGVVL
                     LCCARSGVDVAEYAPARVKRTVAGHGAADKRQVALLVRAVLSLDAPPPSDAADALALA
                     LTHLRQAPLAEALVRMTAARRFQRR"
     gene            627..1391
                     /locus_tag="VLJ38_19460"
     CDS             627..1391
                     /locus_tag="VLJ38_19460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HSU41770.1"
                     /translation="MTRSSARTFSLLAATLAGISFGGAAFAGTPAGSGSSAPSAPHAP
                     APAPGAPAPAPGAPAPGLSAEQIADRIQSFYEKTKTFKAAFKQVYTAKAYAKTKEGVG
                     SVILEKPGKMSWRYTNNGNRIVSDGKIIRVYEKENQQMYEQPLDKSPYPAALAFLVGT
                     GSLKQSFKLSKIDPASANFEGGLVLVGEPREATPAYQKMVLFVDAATFQVRRVLLVDA
                     QGNKNRFDFTSTEVNKAPPPGEFSFTPPKGTQVVRP"
     gene            1510..2577
                     /locus_tag="VLJ38_19465"
     CDS             1510..2577
                     /locus_tag="VLJ38_19465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41771.1"
                     /translation="MTKLCELIARGWLTFLALGFVLFTASRARADEKISEEAKAYFKN
                     GVELIQLTPPNYQDAYYQFKLAYEKSHSWKVLGNLGLCAFKLERDGEALQAYSDYLKG
                     GGKSIDAEERKAMERDSLLITGNTSVLNLSADVDDATLLDARAGSSVPPQTYKFTAGT
                     LGLRLRGGTHTLTASTPDGKQQKWDVTITPGQTLEHRFEFAAAAAPAVVAAAPVAVAP
                     VAAPPPATPPPADQGSSKGGSPLRTVGFITAGVGGAALIGGIVTGVMANSASSRATDQ
                     CQNKVCPTKAQSDFDSASSLATVTDALLIGGGVLAAAGVTLVIVGGKRGSESKAARAP
                     RLELAPSVAANSAGFFARGAF"
     gene            2606..3862
                     /locus_tag="VLJ38_19470"
     CDS             2606..3862
                     /locus_tag="VLJ38_19470"
                     /inference="COORDINATES: protein motif:HMM:NF012238.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding EGF-like domain-containing
                     protein"
                     /protein_id="HSU41772.1"
                     /translation="MSQVSLIKPARIACVGVSLLLAWSCTVADKGDYTFTDTPGSGGH
                     GATSGSPGNDAGKGGSKAGAGGRATGGRAGHGAAGEGGVGAISAGGAAGEAAGEGGAS
                     AGQAGVAGQGGEPGQPTSCDPNPCVHGTCSVTSSGFSCACEAGYEGPRCAVNHDDCAP
                     NPCLHGGACADRVNDFKCDCNGTGYSGTTCQTAGPCVTNPCLNGGVCNATGTTTYTCD
                     CTGTGFEGTTCQTNHNDCTSMSCAHGTCIDRVNGFACDCTGTGYEGTSCETNHNDCTS
                     TSCSGVGGRCVDLVNGFKCACGVDADCGGAVLSCDPVNLVCRSSITKSSEGTTTWPDD
                     ACGSSGPFGGCDSKSQVLGDEWALAVCTDAGWTKGVWEGVATLGCANGTGTVSMWCQN
                     MSPCAEKFETTCQPTDQNVIEFTCSR"
     gene            complement(3866..>4301)
                     /locus_tag="VLJ38_19475"
     CDS             complement(3866..>4301)
                     /locus_tag="VLJ38_19475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41773.1"
                     /translation="ELDVLRALLDDRPRPTHESFERSFFRLYFDRIAATVTAGAGVSL
                     GVLAKSRSALGLAALSALYLVESQRRGRNRYEGLPVRRLRQASGSVRDITGAHTVIFG
                     HTHVAETLPGYLNPGSFTYRAGAPRPYGWVGTNGEVERRTLE"
BASE COUNT          760 a         1415 c         1441 g          685 t
ORIGIN      
        1 gaactcggcg cgcgggccgc aacatggtac tcctttgccg tgatcgttct cggcgtcgac
       61 cccggtaccc gctacctcgg ctggggcgtc gtcgagcgcc agggcaatcg gctgcggcac
      121 cttggccatg gtgtgctcac gctgccgccg acccggccgc tcgccgaacg actcaatctc
      181 atcgatcagg gcctgagcga cgtcatcgcg cgcttcaagc ccgaggcaag ctcggtcgaa
      241 tccttgttct tccataagga cgcgcaggcc gcggccaagc tcggccatgc gcggggcgtg
      301 gtgctccttt gctgtgcgcg ctccggcgtc gacgtggcgg agtacgctcc ggcgcgcgtg
      361 aaacgcacgg tggcggggca cggtgcggcc gacaaacgcc aggtcgcgct gctcgtccgg
      421 gccgttttgt cgctcgacgc cccccctccg agcgacgcgg ccgatgcgct cgccttggcg
      481 ctgacgcatt tacggcaggc cccgctcgct gaagcgctcg tgcgcatgac cgcggccagg
      541 cgatttcagc gacgctgaag cgacggttgc gggcgacgcc tcgaactgca agaacagcgg
      601 ctccccgagc gtattaagtt tcagccatga cccgatctag cgcgcgcacg ttttcgctcc
      661 tcgccgccac ccttgccggc atcagcttcg gcggcgcggc cttcgccggc acgccggccg
      721 gttcggggtc cagtgctcca tcggcgccgc atgccccggc tcccgcgccg ggtgcgcccg
      781 ctcccgcgcc gggtgcgccc gctcccgggc tttccgccga acagatcgcc gatcgcatcc
      841 agagctttta cgagaagacg aagacgttca aagccgcttt caagcaggtc tacaccgcaa
      901 aggcctacgc gaagacgaag gaaggtgtcg gcagcgtcat cctcgaaaaa ccggggaaaa
      961 tgagctggcg ttacaccaac aacggcaacc gcatcgtttc cgacggcaaa atcattcgcg
     1021 tctacgaaaa agaaaatcag caaatgtacg agcagccgct cgacaagagc ccgtaccccg
     1081 cggcgctcgc gttcttggtc ggcaccggca gcctgaagca gtcgttcaag ctgagcaaga
     1141 tcgacccagc gagcgcgaac ttcgaaggcg ggctcgtcct cgtcggtgag ccacgcgagg
     1201 caacgcccgc gtatcagaag atggtgctct tcgtcgatgc ggcgacgttt caggtgcggc
     1261 gtgtgttgct cgtcgatgca cagggaaaca agaaccgctt cgacttcacg agcaccgaag
     1321 taaacaaagc accgccgccc ggtgagttct cgttcacgcc gccgaaaggc acgcaagtcg
     1381 ttcggccgta ggcaaatgtg ggtgcgacac ttcacacgtg cagggtacgt gaagtgtctc
     1441 gagcgatgct cgaatgtgag cagggcttag ggataggcaa tcgaaagccg ttctggcagt
     1501 ctgcccagaa tgacgaagct ttgcgagctc atcgcgcggg gatggctcac gttcctcgcg
     1561 ctcggattcg tgctgttcac ggcgtctcgc gcgcgcgccg acgagaagat ctccgaggaa
     1621 gccaaggctt acttcaagaa cggcgtcgag ctcattcagc tgacgccgcc gaattatcag
     1681 gacgcgtatt accaattcaa gctcgcctac gagaagagcc acagctggaa ggtgctcggc
     1741 aatctcggcc tctgcgcgtt caagctcgaa cgcgacggcg aggcgctgca agcgtacagc
     1801 gactacttga agggcggcgg caagagcatc gacgcggagg agcgcaaggc gatggagcgc
     1861 gactcgctcc tcatcaccgg caacacgtcg gtcctcaacc tgagcgccga cgtcgacgac
     1921 gcgaccctgc tcgacgcgcg cgccggtagc agcgttccgc cgcagaccta caaattcacg
     1981 gcagggacgc tcggcctgcg gctccgcggc ggcacccaca cgctcacggc gagcaccccc
     2041 gacggcaagc agcagaaatg ggacgtgacg atcacgcccg gccagaccct cgagcatcgc
     2101 ttcgagttcg cagccgccgc cgcccccgcc gtcgtcgctg ctgcgcccgt cgccgtggca
     2161 cccgtcgcgg ctcctccgcc ggcaacgccg ccgcccgccg accaaggctc gtcgaaaggg
     2221 ggctcgccct tgcgcacggt cggcttcatc acggccggcg tcggcggcgc ggcgctcatc
     2281 ggcggcatcg tgacgggcgt gatggccaac tccgcctcgt cgcgcgcgac cgatcagtgc
     2341 cagaacaagg tgtgtccgac gaaggcgcag agcgacttcg attcggcgtc gtcgctcgcg
     2401 accgtcaccg acgctctgct catcgggggc ggcgtgctcg cggcggccgg tgtcacgctc
     2461 gtgatcgtcg ggggaaaaag gggcagcgaa tccaaagcgg cccgtgcgcc gcggctcgag
     2521 ctagcgcctt ccgtagctgc caatagcgcg ggcttcttcg cgcgcggcgc gttctgagcc
     2581 ccaggtcgtt gtcggaggat tacagatgtc acaggttagc ttgatcaaac ccgcgcgcat
     2641 cgcttgcgtc ggtgtcagtc tgttgcttgc gtggtcgtgc accgtcgccg acaaaggcga
     2701 ttacaccttc accgacaccc ccgggtcggg cgggcacggg gcgacgagcg ggtcgcccgg
     2761 taacgatgca ggaaaaggtg gctcgaaagc cggagcaggc ggacgcgcta cgggcggacg
     2821 cgccgggcat ggagctgctg gcgagggcgg cgtcggcgcc atttccgcag gcggagccgc
     2881 gggcgaagct gcgggcgaag gcggcgcgag cgcgggtcaa gcgggtgtag cgggacaagg
     2941 tggcgagccg gggcagccca cgtcctgcga cccgaatcca tgcgttcacg gtacctgcag
     3001 cgtcacgagc tccggattct cgtgcgcgtg cgaggccggt tacgaggggc cgcgctgtgc
     3061 ggtcaatcac gacgattgcg cgccgaatcc ctgcctccac ggcggagcct gcgccgaccg
     3121 cgtcaatgac ttcaagtgcg actgcaacgg caccggctac tcgggcacta cgtgccagac
     3181 ggcgggaccg tgcgtcacga atccttgtct gaacggtggc gtctgcaacg cgaccggaac
     3241 caccacgtat acgtgcgatt gcaccggcac gggcttcgag ggcacgacct gtcaaaccaa
     3301 ccataacgac tgcacgtcca tgagctgcgc ccacggcacc tgcatcgacc gggtaaacgg
     3361 ttttgcctgc gactgcacgg gcaccgggta cgagggcacc agctgcgaaa ccaaccataa
     3421 cgactgcacc tccacctcgt gctcgggcgt cggtggccgc tgcgttgatc tagtgaacgg
     3481 cttcaagtgc gcgtgcgggg tggatgccga ctgcggcggc gccgtgctct cgtgcgatcc
     3541 ggtgaacctc gtgtgccgta gctcgatcac gaagtctagc gaaggcacga cgacatggcc
     3601 ggacgacgcc tgcggcagca gtggcccttt cggtgggtgt gacagcaaga gtcaggtgct
     3661 cggcgacgag tgggcgctcg ccgtttgcac ggacgctggc tggaccaagg gcgtttggga
     3721 aggcgttgcg acgctcggat gtgcgaacgg gaccggcacc gtcagcatgt ggtgccaaaa
     3781 catgtctccg tgcgccgaga aattcgagac gacctgtcag ccgaccgatc agaacgtcat
     3841 tgaatttacc tgcagccgct aacgtctatt cgagcgtgcg gcgctcgact tcgccgttcg
     3901 tgccgaccca gccgtacggg cgcggcgcgc cggcgcggta ggtgaaggaa cccgggttca
     3961 aatagccggg caacgtttcg gcgacgtgcg tgtgcccgaa gatgacggtg tgggcgccgg
     4021 tgatatcgcg gacgctcccg ctcgcttggc ggagccggcg caccggtagc ccttcgtagc
     4081 gattgcggcc gcggcgctgg gattcgacca ggtaaagggc gctgagcgcc gcgagcccga
     4141 gtgcgctcct gctctttgcg agcacgccga gactcacgcc cgcgccggcc gtcacggtcg
     4201 cagcgatacg atcgaagtag agccggaaga agctgcgctc gaagctttcg tgcgtggggc
     4261 gcgggcgatc gtcgagcagg gcacgcaaga cgtcgagctc g
//
LOCUS       DATIML010001131         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1683799, whole genome shotgun sequence.
ACCESSION   DATIML010001131 DATIML010000000
VERSION     DATIML010001131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1683799"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(658..>2009)
                     /locus_tag="VLJ38_19480"
     CDS             complement(658..>2009)
                     /locus_tag="VLJ38_19480"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU41774.1"
                     /translation="PTCGTGTFLAAARRFSGARLVGYERSPVYVEAARQALAGTNATL
                     RIADFFATDWASVVAELPEPLLVLGNPPWVTNSTLGSLDAQNLPAKSNHQRQAGFDAL
                     TGKSNFDISEWMLGRLLDVTRGRRFTLAMLCKAAVARRLLERCAGSAWELSGAVHAID
                     ARAHFAATVAAVLLVVRGSGERARAPSEPRWAVYSSLAASEPASHMGVSRGRVFSDFD
                     VCRATSALETESAQGWRSGVKHDLARLMELVEEDGTLRNGLGEAVAIERDHVYPLFKG
                     TDLVRERRSPRRFVLVTQRTLGEDTSAIRERAPATWRYLERHRAAFEARKSRIYRGQP
                     PFSMFGVGEYTFAPNKVAISALHKELTFRALAPEGERPVVLDDTAYFLPCANAERAAL
                     LVRALTSPLARRFFEARLFWDAMRPVNKALLESLSLAALEDALAREPNGVEGCRAAP"
BASE COUNT          342 a          719 c          629 g          319 t
ORIGIN      
        1 tccatcgacc tcggctggga atcgtaccaa caggacgacg cgcgcaccgc gtacatcgac
       61 gacgtcgtac tctccacgac caagatcggc tgcccgtgaa ccacatcccg gttcggcctc
      121 gcaccgcaga tgtcagtgac ctcgcaatgt ctgtgcttgt tggttgaagg ggcgacctgc
      181 gtgcggcatc gttacggcga cgtacggcgc cgttccactg tgctgcacgc gacgtgacgg
      241 ctaagcacat cgtcgttcca agccgctcat ccactcgctg cctgggccgc gcgcagctcg
      301 gcgcgtcgaa gcccgccctt cactttcatg ggaaagtcac gcttcaaaaa gatccgaaag
      361 gctcgtgctg gtgcgaggtt tttcggtgtt cgatgagctc gcgcccgaac tcttgttcgg
      421 cggcgagagc attatgcgcc gcgcagcaca gggtgagatt cgactcgcgc cgtcagcgag
      481 ccaagagcgc gagcgcccag gaatgccgtc aaggcaaatc gcagatcaga acggactcac
      541 caagcccgtc gcgctcgtcg gtgatctacc caaaagcgct gcggccggtg ccacgttgct
      601 gcgcacccgg tcgcctcttt acggcgccgc acgtcgcggt tgcacgctgt tcacctttta
      661 cggcgccgcg cggcaccctt ccacaccgtt cggctcgcgc gcgagagcgt cttcgagcgc
      721 agcgagtgac agcgactcga gcagcgcctt gttgacgggt cgcatggcgt cccagaagag
      781 ccgcgcctcg aagaaccggc gagcgagcgg cgacgtgagg gcgcgcacga gcagagcggc
      841 gcgctcggcg ttcgcgcacg gcagaaaata cgccgtatcg tcgagcacga cggggcgctc
      901 gccctccggc gcgagcgcgc gaaacgtgag ctctttgtgc agcgccgaga tcgcgacttt
      961 gttcggcgcg aacgtgtact cgcccacgcc gaacatcgaa aacggcggct gcccgcgata
     1021 aatccgactc ttgcgcgctt cgaaagccgc gcggtgccgc tcgaggtaac gccaagtcgc
     1081 cggcgcgcgc tcccggatcg cgctcgtgtc ctcaccgagc gttcgctgtg tcacgagcac
     1141 gaagcgccgc ggcgagcgcc gctcccgcac gaggtccgtc cccttgaaca gcgggtacac
     1201 gtgatcgcgc tcgatcgcta cggcctcgcc gagcccgttg cgcagcgtgc cgtcttcctc
     1261 caccagctcc atcagccgcg ccagatcgtg cttcacacct gaacgccagc cttgtgcgct
     1321 ctcggtttcg agagcagacg tcgcccgaca cacgtcgaag tcgctaaaaa cccggccgcg
     1381 actcacgccc atgtgactcg caggctcgct cgccgccagg ctcgaataga ctgcccagcg
     1441 cggctcgctc ggcgcgcgag cgcgttcccc gctgccgcgc accacgagca acacggccgc
     1501 gaccgtcgcc gcaaagtgcg cgcgcgcgtc gatcgcgtgc acggcgccgc tgagctccca
     1561 ggccgagccg gcgcaccgct cgagcaagcg ccgcgccacg gccgctttgc acaacatcgc
     1621 gagcgtgaag cgccgcccgc gcgtcacgtc gaggagacgc ccgagcatcc actccgaaat
     1681 gtcgaagttg ctcttgcccg tgagcgcgtc gaaccccgct tggcgctggt gattgctctt
     1741 cgccggtaag ttttgcgcgt cgagcgagcc gagcgtcgag ttcgtcaccc acggcggatt
     1801 gcccagcacg agcagcggct cgggcagctc ggcgacgaca ctcgcccaat cggtggcaaa
     1861 aaagtccgcg atccgcagcg tcgcgttcgt cccggcgagc gcctgccttg cggcttcgac
     1921 gtacaccggc gagcgttcgt agcccacgag ccgcgctccc gaaaaacgtc gtgccgcggc
     1981 gagaaaagtc cccgttccgc aggtcggct
//
LOCUS       DATIML010001132         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3125522, whole genome shotgun sequence.
ACCESSION   DATIML010001132 DATIML010000000
VERSION     DATIML010001132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3125522"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..1334
                     /gene="ftsW"
                     /locus_tag="VLJ38_19485"
     CDS             138..1334
                     /gene="ftsW"
                     /locus_tag="VLJ38_19485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HSU41775.1"
                     /translation="MRPLVASVPVRRTGSLDSVLAAAAIALLGFGVVMVYTSSVVEAT
                     TTFRDSEYFLVRQAIYAVTGLAILLVASRFDYHRIKPFTYPILGVVTFLMILSVTGFG
                     HTGGGAARWLAIGPIHIQPSEAAKLALICWLAYSLEKKREQMKSFSIGMLPHFLMAGF
                     LMLLCLKQPDFGGAVVLLFLTFALLFVAGARLGYLLGAGMLGAVFAAWAVRFTSYRWE
                     RMLAWFNMSEHRQDLAYQPFQSVMSFGSGEFWGLGLGKGLQVLYLPEAHTDFISAIIG
                     EELGFIGIVGLCAVYTLIVARGVRAALRAEDEYGSYIAFGISVLFGAQALVNLSVAMA
                     MLPTKGLTLPFVSFGGSSLLVSSAAMGVLLSVSRGTKVPNARVLEGPDPEASAMLVTQ
                     AGEGAG"
     gene            1331..>2007
                     /locus_tag="VLJ38_19490"
     CDS             1331..>2007
                     /locus_tag="VLJ38_19490"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU41776.1"
                     /translation="MSFGATRTLLFAGGGTGGHVFPLLAVAEVVRELAPDVRVVFVGT
                     ERGLEAKAVPARGYELELMRVLPLRGAGLLGLMRGVGQAARALPDGHALVKKLAPAAV
                     LSIGGYAAGPVSLAAWARGVPLALLEPNSVMGLANRLVAPLARRGYVAFAESETHFRA
                     GCARRVGVPLRPGFRPAPYPPPRDDASSALRVLVLGGSQGAKALNEAVPRAVAQLGSA
                     LSVVHQCG"
BASE COUNT          240 a          683 c          704 g          380 t
ORIGIN      
        1 ggcgatggcg acgccgagcg cggcgacgcc gtgctcttga gccccgcttg ctcgagcttc
       61 gacatgttca aaagctacgc cgaccgcggc gatcgcttcc gcgacgcggt cgtgcggctg
      121 tcctcggagg taccggcatg agacccctcg ttgcgtccgt tcccgtgcgc cgcaccggct
      181 cgctcgacag cgtgctcgcc gcggccgcga tcgcgctgct cgggttcggc gtggtcatgg
      241 tctacacctc gagcgtcgtc gaagcgacga cgaccttccg cgattccgag tatttcctcg
      301 tgcggcaggc gatttacgcg gtcacgggcc tcgcgatcct gctcgtcgcc tcgcgcttcg
      361 actaccaccg catcaagccc ttcacgtacc cgatcctcgg cgtcgtcacg ttcctcatga
      421 tcctcagcgt gacggggttc ggccacacgg gcggcggcgc tgcgcgctgg ctcgcgatcg
      481 gcccgattca cattcagccc tcggaagcgg ccaagctcgc cctgatctgc tggctcgcct
      541 attcgctcga gaagaagcgc gagcagatga agagcttctc gatcggcatg ttgccgcatt
      601 tcttgatggc cggctttctg atgctgctct gcttgaagca gcctgacttc ggcggcgcgg
      661 tcgtactcct gttcctcacc ttcgcgctcc tgttcgtggc gggcgcgcgg ctcggctact
      721 tgctcggcgc gggcatgctc ggcgcggtgt tcgctgcctg ggcggtccgt ttcacgagct
      781 accgctggga gcgcatgctc gcctggttca acatgagcga gcaccgccag gatctcgctt
      841 accagccgtt ccagtcggtg atgagcttcg gctcggggga attttggggc ctaggactcg
      901 gcaaggggct gcaggtgctt tacctgcccg aggcgcacac cgacttcatc tccgccatca
      961 tcggcgagga gctcggtttc atcggcatcg tggggctctg cgccgtgtac acgctgatcg
     1021 tggcgcgcgg cgtgcgggcg gcgctgcggg ccgaagacga gtacggctcg tacatcgcgt
     1081 tcggcatttc cgtgctgttc ggagcgcagg cgctcgtgaa cctctccgtc gccatggcga
     1141 tgctaccgac gaagggactc accttgccgt tcgtgagctt cggcggctcg tccttgctcg
     1201 tgagctccgc cgcgatgggc gtgctcctgt ccgtttcgcg cggcaccaag gtcccgaacg
     1261 cgcgcgtgct cgaggggccc gatcccgaag cgagcgccat gctcgtgacg caagcggggg
     1321 agggcgcggg atgagcttcg gcgcgactcg cacgcttctt ttcgccggcg gcggcacggg
     1381 gggacacgtc ttcccgctgc tcgccgtggc ggaggtggtg cgcgagctcg ctcccgacgt
     1441 gcgcgtcgtc ttcgtcggca ccgagcgcgg gctggaagcg aaggccgtgc ccgcgcgagg
     1501 gtacgagctc gagctcatgc gtgtcttgcc gctgcggggc gcgggattat tgggcttgat
     1561 gcgcggcgtc gggcaagccg cgcgtgcgtt gccggatgga cacgcgctcg taaaaaagct
     1621 tgcgcccgcg gcggtcctct cgatcggcgg gtacgcggcg ggtcccgtct cgctcgcggc
     1681 gtgggcgcgc ggcgttccgc tcgcattgct cgagccgaac agcgtgatgg gactcgcgaa
     1741 ccggctcgtg gcgccgctcg ctcggcgcgg ttacgtcgcg ttcgcggagt cggagacgca
     1801 ctttcgcgcg gggtgcgcgc ggcgcgtcgg ggtgccgctg cgtcccggtt tccgtccggc
     1861 gccgtacccg ccgccgcgcg acgacgcgag ctcggcgctg cgcgtcctcg tgctcggcgg
     1921 cagccaaggc gccaaggcgc tgaacgaagc cgtaccgcgc gcggtcgcgc agctcggctc
     1981 cgcgctctcg gtcgtgcacc aatgcgg
//
LOCUS       DATIML010001133         3899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_816472, whole genome shotgun sequence.
ACCESSION   DATIML010001133 DATIML010000000
VERSION     DATIML010001133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816472"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VLJ38_19495"
     CDS             <1..463
                     /locus_tag="VLJ38_19495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41777.1"
                     /translation="ACAAAKKLAADSKGMLHSAEHLYYEALIRAGHAGRGTLRERRAV
                     ARAGAKLSAWARHCPANFAHKAELVRAESLRLAGDTAQALSAHARAAELASEFGYANV
                     EGLAHLLAARLHAECGQTAGADAALERARASFRRWGANALAAAPDLLQRQR"
     gene            complement(568..3297)
                     /gene="ppc"
                     /locus_tag="VLJ38_19500"
     CDS             complement(568..3297)
                     /gene="ppc"
                     /locus_tag="VLJ38_19500"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF000584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HSU41778.1"
                     /translation="MHDDMRYLGSVLGSVVRRLQGEATFRAIEDLRTQSRDRRRGEPN
                     APTLEAMLAQVDALPIELAAPVARAFTLFFFLLNTAEQVHRVRRRHAYEREQNQAPQP
                     GSFRWVFDELAKQGKSAADVRELLRGLEVRPVLTAHPTEATRRTLLALQSRLSEALIK
                     RQEAPPSERKLIEATIETDIELLWLTDEVRRDRPSVLDEVSSAIYYLEDRLVGATAAV
                     RASAERAFREAFGRDLGLALRISLGSWVGGDRDGNPYVTPEITLAAVRRTGHALLLLY
                     RRRIDELVGQLSVSDRLTPATEALRSSLDHDKALLPALWEANRRRDAHEPLRLKLTFM
                     AGRIEALRSEIASRDAGRPERLLGAYTNPSELIADLSLVREALIAARADRAREALIEP
                     FIALVEQLGFHGYDLDLREDADAHTRAIAAIAETVEAPPLDGEALRRELAGRRPLLSP
                     HAPLDPAARQTFEVFRTMRVVQDELGEAAASTYIVSMCKTAEDLLRVLLLAREAGLVD
                     LAADPPKSRVDAVPLFETREDLVNSPAIMQSLFEDAVYQQQLAARGRHQEVMIGYSDS
                     AKDVGVVTASWELYRAQEALAEVARTYDVTLTLFHGRGGTVGRGGGSPVYRALTALPP
                     GTLHGRIKITEQGEIIAQKFGLPAIAERSFEVMMTGTLMAAISDWRTGLPHGTEARFR
                     EVMDAMSATSQKVFRKIVHEDPRLFQLFLAATPVRELTHVHFGSRPTYRERGLGTIQG
                     IRAIPWNFGWTQMRLMVSAWLGAGAGFKSALSAPGGLELLRQMAKSWPFFDDLLDKLA
                     MVCAKADLEIAKLYLDRLGSDKELVKLILDDFEATVSALHQIRERDLIQDHRFLRGSL
                     ELRNPYVDPLSLLQVSLLSKKRALPEEHPDRALLDQALGTTLNGIAQAMRNTG"
BASE COUNT          571 a         1303 c         1411 g          614 t
ORIGIN      
        1 cgcgtgcgcg gcggcgaaga agctcgcggc ggactcgaag ggtatgctgc actcggcgga
       61 acacctctac tacgaagccc tcatccgcgc ggggcacgcc gggcgcggca cgctgcgcga
      121 gcggcgcgcg gtcgcgcgtg ccggcgcgaa actgagcgcc tgggcgcggc actgccccgc
      181 caatttcgcg cataaagccg agctcgtgcg cgccgagtca ctgcgcctcg cgggtgacac
      241 cgcgcaagcg ttgagcgctc atgcgcgcgc ggccgagctc gcgtccgagt tcggctatgc
      301 gaacgtcgag ggcctcgcac atctactcgc ggctcgcctg cacgccgagt gcgggcagac
      361 tgccggggcc gacgcggcgc tcgagcgcgc ccgagcgagc tttcgccgct ggggcgcgaa
      421 cgcgctcgcc gccgcgcccg atttgctgca gcgtcaacgt tgagtgccgg cgcctgccgg
      481 tcgcctcagt gctcgctgcg agcgtcgccc gagtgagcta aggcgcgacg atcgcacgga
      541 tagaactcgc acgcgcagtc ggagcgctca tcccgtattc cgcatcgcct gcgcaatccc
      601 gttcaaggtc gtgccgagcg cctggtcgag caacgcccgg tccggatgct cctccggcag
      661 tgcccgcttc ttcgagagca ggctgacctg caacagcgag agcgggtcga cgtaggggtt
      721 tcggagctcg agcgagccgc gcaagaagcg atggtcttgg atgaggtcgc gctcgcggat
      781 ttggtgcagc gccgagacgg tcgcctcgaa gtcgtcgagg atgagtttga cgagctcttt
      841 gtcgctgccc aggcggtcga ggtagagctt ggcgatttcg aggtcggcct tggcgcagac
      901 catggcgagt ttgtcgagca ggtcgtcgaa gaagggccag ctcttggcca tttggcgcag
      961 gagttcgagg ccgcccggtg cgctcagggc gctcttgaag ccggcgcccg cgccgagcca
     1021 ggcggagacc atcagtcgca tctgggtcca gccgaagttc cacgggatgg cgcggatgcc
     1081 ttggatcgtg ccgaggccgc gctcgcggta ggtcgggcgc gaaccgaagt gcacgtgcgt
     1141 gagctcgcgc acgggcgtag cggccaagaa cagctgaaac aggcgcggat cttcgtgcac
     1201 gattttacgg aataccttct gcgaggtggc gctcatcgcg tccatgactt cgcggaagcg
     1261 tgcttcggtg ccgtggggca agccggtgcg ccagtcggag atggcggcca tcagcgtgcc
     1321 cgtcatcatc acttcgaagc tgcgctcggc gatggcgggg aggccgaatt tttgcgcgat
     1381 gatttcccct tgttcggtga ttttgatgcg gccgtgcagg gtgccaggcg ggagcgcggt
     1441 gagcgcgcgg tagacggggg agcctccgcc gcggccgacg gtgccgcccc ggccgtgaaa
     1501 cagcgtgagt gtcacgtcgt aggtgcgggc gacttcggcg agcgcttctt gcgcccggta
     1561 gagctcccac gacgccgtga cgacgcccac gtctttggcc gagtcggagt agccgatcat
     1621 cacctcttgg tgacgcccgc gcgcagcgag ctgctgctgg tacaccgcgt cctcgaacag
     1681 gctctgcatg atggccggcg agttcacgag gtcctcgcgc gtctcgaaca agggcaccgc
     1741 gtcgacgcgc gatttcggcg gatccgctgc gagatcgacg agtccggctt cgcgcgcgag
     1801 caggagcacg cgcagaagat cttcggccgt cttgcacatg gacacgatgt acgtcgaggc
     1861 ggccgcttcc ccgagctcgt cctgcacgac gcgcatcgtg cgaaacacct cgaacgtctg
     1921 gcgcgcggcg ggatcgagcg gagcgtgcgg cgagagcagc gggcgccggc cggcgagctc
     1981 gcgccggagc gcttcgccgt cgagcggcgg agcctcgacc gtctcggcga tggcggcgat
     2041 ggcgcgcgtg tgcgcgtccg catcctcgcg caagtcgaga tcgtagccgt ggaacccgag
     2101 ctgctcgacg agcgcaatga agggctcgat caacgcctcg cgtgcccggt cggcgcgcgc
     2161 cgcgatcagc gcctcgcgca cgagcgagag atcggcaatc agctcggacg gattggtgta
     2221 cgcgccgagc agccgttcgg gacggcctgc gtcgcgcgag gcgatttcgc tgcgcaaggc
     2281 ttcgatgcgg cccgccatga aggtgagctt gagccgcaaa ggctcgtgag cgtcgcggcg
     2341 gcggttcgct tcccagagcg ccggcaggag cgccttgtcg tgatcgagcg agctgcgaag
     2401 agcctccgtc gcgggcgtca gacggtcgga aaccgagagc tgccccacga gctcgtcgat
     2461 gcggcgccgg tacagaagga gcagcgcgtg gcccgtgcgg cgcacggccg ccagcgtgat
     2521 ttccggcgtg acgtacgggt tgccgtcacg gtcgccgccg acccagctgc cgagcgagat
     2581 gcggagcgcc aggccgagat cgcggccgaa cgcttcgcga aacgcgcgtt cggcgctcgc
     2641 acgcaccgcg gcggtcgcgc ccacgagccg gtcttccagg tagtagatgg cggagctcac
     2701 ttcgtcgagc acgctcgggc gatcgcgccg gacctcgtcc gtcagccaaa gcagctcgat
     2761 gtcggtctcg atcgtggctt cgatgagctt gcgctcggag ggcggcgcct cctggcgctt
     2821 gatgagcgct tccgacaggc gcgactgcag ggcgagcagc gtgcggcgcg tggcttcggt
     2881 cgggtgcgcc gtcagtaccg gccgcacctc gagtccgcgc aggagctccc gcacgtcggc
     2941 cgcgctcttg ccttgcttgg cgagctcgtc gaaaacccag cgaaagctgc cgggctgcgg
     3001 cgcctgattt tgctcgcgct cgtaggcgtg ccggcggcgg acgcggtgca cctgctcggc
     3061 ggtgttcaag aggaaaaaga agagcgtgaa ggctcgcgcc acgggggccg cgagctcgat
     3121 cggcagggcg tcgacctgcg ccagcatggc ctcgagcgtg ggggcgttgg gctcgccgcg
     3181 ccgccggtcg cgggattggg tgcgaagatc ctcgatcgca cggaacgtgg cctccccctg
     3241 caggcggcgg acgacgctgc cgagcacgct accgaggtag cgcatgtcat cgtgcaaggg
     3301 ccggtcttcg ggtcgaacgt gtatctcgcg cactttggag tccttgtcgg ctcgtctcgt
     3361 gagacccgtg agtcgaaggg ggtgggttcg ggtcgcctgt gcttccttca tgtcacggca
     3421 cgagcctgga cggaagaatg ccaactgatg tttcccgaag gatcccgggc tttttctcgg
     3481 cgtcgatctt cgctataggc aaggatgaga tgagcgaaga agagcctccg cgcggggccc
     3541 cgccggaagc gccggaagcg tccgaagcgc cggaaccccc gaaggcctcg ggtgtcgccg
     3601 tagcgccacg gccgtcgttc gcccccccgc gcccggcttc gacggccgcg ccgcaagcgc
     3661 cgcgtagcac tttgcctgga attacgccga cgccgccgcc agcgagcgcc ccgctgccgg
     3721 ccgctccgcc cttggctcgc ccgtcgggcc ctccgccacc accgatccgc tcgcggcccg
     3781 cgccgccgcc cgactcgccc gtgaccggtc gcttgccggc ctcgacggaa tcggcgccgc
     3841 acgccatgcg tacgccgccg cctccgccga gcatgcggcc gcatccgccg ggtttgcgt
//
LOCUS       DATIML010001134         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3703346, whole genome shotgun sequence.
ACCESSION   DATIML010001134 DATIML010000000
VERSION     DATIML010001134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3703346"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1169)
                     /locus_tag="VLJ38_19505"
     CDS             complement(<1..1169)
                     /locus_tag="VLJ38_19505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41779.1"
                     /translation="MDDARPSSRRRRALLLVGVVVLYVASAWLKSRLYENHASALIGF
                     GCATPKGCFAEFNRASLPRSAVVFRSGGYDGQFFYYLGRELYGGPHAIVDSEAFRRAR
                     IGLPLLAGPLLVLGDVGRVYGLPLTLLAVHLLSVWQLARAGTEPLRLALFAFNPFSLL
                     SFMLCTADGAALSLTVLGALALAARWRARALGLGLIAFALLTKETLIAVPLALAAGAL
                     LDRASGIGVRIVRALLLTLTAVPMLVWWHVVGFSFGLAASHGGLPLSGFFQYLPHVDL
                     ARGLLAFLLVLGGALAILCLRAPGSRVAGFVLLASVALVSTATAEEYWATISNVARLF
                     TPMAAAPALLGEPSALTPSLRVGGGGWTRRIGLLWALVLLSLSVLFVLREATRRP"
     gene            complement(1212..>1527)
                     /locus_tag="VLJ38_19510"
     CDS             complement(1212..>1527)
                     /locus_tag="VLJ38_19510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41780.1"
                     /translation="VAADVAAVLDASGLELAVRLRRALVEFIQSMRGYLTNDAALVGV
                     ESRTSSPVRVPRDPETLESPDLLGLYPAGEGAGYAGGIVSAALDGMRVAERVAARLEH
                     TR"
BASE COUNT          300 a          517 c          543 g          167 t
ORIGIN      
        1 aatggccgcc gtgtcgcttc gcgcagcacg aagaggacgc tcagtgagag caggacgagt
       61 gcccacagca gcccaatgcg ccgggtccaa ccgccgcccc ctacccgcag cgagggcgtg
      121 agcgcgcttg gctcgccgag cagagccggc gcggccgcca tgggcgtgaa gaggcgcgcg
      181 acgttggaaa tggtggccca gtactcttcc gccgtcgccg ttgaaactag agcgacgctc
      241 gcgagcaaca cgaagcctgc cacccgcgac ccgggcgcgc gcaagcagag aattgcgaga
      301 gcgccgccga ggacgagtag gaacgccagc aggccgcgcg cgagatcgac gtgcggcagg
      361 tactggaaaa acccgctcaa cggcagccca ccgtggctcg cggctagacc gaacgagaag
      421 cctaccacgt gccaccagac cagcatcggg acggcggtga gcgtcaagag cagcgcgcga
      481 acgatccgca cgccgatgcc gctcgccctg tcgaggagcg cgccagcggc gagcgcaagc
      541 ggcacggcga tgagcgtctc cttcgtgagc agcgcgaacg cgatgagccc gagaccgagc
      601 gctcgcgcgc gccatcgcgc tgcgagcgcg agcgctccca gcacggtgag cgacagggcg
      661 gcgccgtcgg ccgtgcagag catgaagctc aggagcgaaa acggattgaa agcgaagagc
      721 gcgagacgga gcggttcagt gcctgcccgc gcgagctgcc agacggacag gagatgaacg
      781 gcgagcagcg tgagcggcaa gccgtagacg cgtcctacgt ctccgagcac gagcagcggc
      841 ccggcgagca gcggcagtcc gatgcgtgcg cggcgaaacg cctccgaatc tacgatcgcg
      901 tgcgggccgc cgtagagctc ccgcccgagg taataaaaga attgcccgtc gtagccgccc
      961 gaacgaaata cgacggcgga gcgcggcagg ctcgcgcggt tgaactcagc aaagcagccc
     1021 ttgggcgtgg cgcagccgaa gccgatcagc gccgaggcgt gattctcgta gagcctactc
     1081 ttgagccaag cggacgcgac gtagagcacg acgacaccga cgagcaagag cgctcggcgg
     1141 cgtcgactcg agggccgtgc gtcgtccaac gcgcggacgc tatcacggcg cgtgcggctc
     1201 cgagcccgct gtcagcgcgt gtgctcgagc cgagccgcga cccgttcggc gacgcgcatg
     1261 ccgtcgagcg ccgcgctcac gatgccgccc gcatagccgg caccttcgcc cgcagggtaa
     1321 agcccgagca gatccggcga ctcgagcgtc tccggatcgc ggggcacgcg gacgggcgag
     1381 ctcgtgcgcg actcgacgcc gacgagcgcc gcgtcgttcg tcagatagcc acgcatgctc
     1441 tggatgaatt cgacgagcgc gcggcgtagg cgcacggcaa gctcgagacc ggaggcgtcg
     1501 agcacggccg caacgtcggc tgctacc
//
LOCUS       DATIML010001135         5064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5439856, whole genome shotgun sequence.
ACCESSION   DATIML010001135 DATIML010000000
VERSION     DATIML010001135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5439856"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..462
                     /gene="flgB"
                     /locus_tag="VLJ38_19515"
     CDS             61..462
                     /gene="flgB"
                     /locus_tag="VLJ38_19515"
                     /inference="COORDINATES: protein motif:HMM:TIGR01396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009429 - bacterial-type flagellum basal
                     body, proximal rod [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HSU41781.1"
                     /translation="MSGVFNSVDPLRAALDYHLDRQNVLASNVAHIDTPGYRPHDLER
                     IEQSGFSAVMGVALQRTNERHLIGGGVDALPNGRVFEDLSAGVGNDGNYVSIDREAAK
                     LAANQLRYDTVSAIVSAELHQLTFAASDGKG"
     gene            472..903
                     /gene="flgC"
                     /locus_tag="VLJ38_19520"
     CDS             472..903
                     /gene="flgC"
                     /locus_tag="VLJ38_19520"
                     /inference="COORDINATES: protein motif:HMM:TIGR01395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HSU41782.1"
                     /translation="MLGVFSALEISASGLGAERVRMNTIASNLANVHTTKTAAGGPFK
                     RLDPVFEAVGLQSNDEPYSADSGVSLVNVARIAEDKRPGTLVYEPGNPDANAGGYVEY
                     PNVNAVEEMVNMITASRAYEAGITSIDSVKQMARSALSIAK"
     gene            924..1229
                     /locus_tag="VLJ38_19525"
     CDS             924..1229
                     /locus_tag="VLJ38_19525"
                     /inference="COORDINATES: protein motif:HMM:NF014143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HSU41783.1"
                     /translation="MGPIDSAGIPLLAPHLAREVETPAPKVDADGFASLVKEAVVKTN
                     DQIQRAENAGSEFAAGRVDDIHGTMLELSKADIELRFAGNVRNKVTDAFYELWRMQI"
     gene            1282..2934
                     /gene="fliF"
                     /locus_tag="VLJ38_19530"
     CDS             1282..2934
                     /gene="fliF"
                     /locus_tag="VLJ38_19530"
                     /inference="COORDINATES: protein motif:HMM:TIGR00206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HSU41784.1"
                     /translation="MPEPIKNVLAQLANFWRGLSTPKRVALLVATLGVLLLGLGVVLL
                     ETHEQYSYLYTELSTEDTAAVVEKLKAGQVPYRLDASGTRIEVPEERVHELRLELASA
                     GLPRGGGVGFEIFDKSQLGSTEFEQQVNLRRALEGELSRSIGTLRGVQSARVHLVIPE
                     RRLFVAGQERASASVVLKLRSPEAATREEVAGIVHLVASAVPGLSRDRVSVVSSDGVT
                     LHRPNFDGEANSGSSDLAEQGQVMGSQLEVAAREQLERVVGPGLADVRVNVAINSATR
                     EKTSELYDKDTIALRSEHKVEEMTGGNQLAIAGVPGAQSNLPDAKTDAPDPTPAPAGS
                     GGVFRRTQTRNWEVDRVVEKTSTPPGEVRRMSVAVLVDENRVLKGGKLVVVPRTSEEL
                     VALEDIVKKAVGFDAERGDSLTLKALAFHHDDMTDVTKVTDLPVWRRYLPFAALGAVV
                     LVALFVLSLRSKHAKQLAAIRRAAELKAAQRASALPAPASSAHLPASPEEALDALPAV
                     DYRAKALELASRDPATASLVLKAWLAEGTDAAAAALPLPAKA"
     gene            2980..3957
                     /locus_tag="VLJ38_19535"
     CDS             2980..3957
                     /locus_tag="VLJ38_19535"
                     /inference="COORDINATES: protein motif:HMM:NF013838.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliG C-terminal domain-containing protein"
                     /protein_id="HSU41785.1"
                     /translation="MALNGPEKAVLLLLSLEESVATPIIADLAPAELRRLREVAANMS
                     SVPTDALSNVYAEFVSRTQRAVAVPRGGVRHLHNIAVRALGSVKAQEMFAEAPQTAMQ
                     RLATADPTQLAGLLESEHPQLTAALLSQLDPAKAAKTLDALPEHVRPLVLARLGSMTE
                     VPSELLEEAAMALGAELPAAKAESSLNVDGLAYSAQLVRKLGRQKGAALLEKLETENG
                     ELARQIRGSLYSFEDLLAVDAKGMRLLLESVPVERLTLALKTASETMVQHVFSSMSKR
                     AAERIKEDMEAIGTARLSDVEAAQREILEVALRLDAEGQISLETGQDGG"
     gene            3947..4783
                     /locus_tag="VLJ38_19540"
     CDS             3947..4783
                     /locus_tag="VLJ38_19540"
                     /inference="COORDINATES: protein motif:HMM:NF014196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HSU41786.1"
                     /translation="MAAESGPPAARRALFTEVNAERPRRAEFTNVTPDRPRKKPRWLS
                     ARESTVPPLAPPPQSQPRAAEAPSLKPAPVPREFVQAMRRELRTLPNASHEIARDLAQ
                     NEALAQEMARSLRPSELPPPGFSPPGFAPPVADARSDPGLERAFRAAIEEMASMRSKV
                     LEAAAHELATLAAIIARRVIARELQLAPAILEDLVREALEALSEQDRIVVRVGRGFQN
                     AVDGLEQKLAGRSGNFRVRLEAGLGDYDCIVETELGQVDESVEKRLEKLLEALKPDSE
                     AP"
     gene            4780..>5064
                     /locus_tag="VLJ38_19545"
     CDS             4780..>5064
                     /locus_tag="VLJ38_19545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41787.1"
                     /translation="MTLGALIERCESVPLHVPYGTVLDVVGLIVEIGGLKAAVGETLS
                     IVASPTQSLDVEVVGFRGGRLLATPLGPLAGVRPGARVARRHRGPTVPVSD"
BASE COUNT          848 a         1779 c         1680 g          757 t
ORIGIN      
        1 caacgggaaa cgtgaggcaa cgcgcgaaac gctggcacgt cacgtgcttt gaagcctcgc
       61 gtgtccggcg tcttcaactc ggtcgatccg ctgcgtgcag cgctcgacta ccacttggat
      121 cgccagaacg tgctcgcgtc gaacgtcgcg cacatcgaca cgcccggcta ccgtccgcac
      181 gatctcgagc gcatcgagca gagcggcttc agcgccgtca tgggcgtcgc gttgcagcgc
      241 acgaacgagc gtcacctcat cggcggcggc gtcgacgcgc tgccgaacgg ccgcgtgttc
      301 gaggatctga gcgccggcgt cggcaacgac ggcaactacg tctcgatcga tcgcgaagcc
      361 gcgaagcttg cggccaacca actccgctac gacaccgtct cggcgatcgt ttccgccgag
      421 ctccaccaac tcaccttcgc ggcgagcgac ggtaagggat gatgaaaagc catgctgggc
      481 gtctttagtg cactcgaaat ctcggcttcc ggcctcggcg ccgagcgcgt gcgcatgaac
      541 accatcgcgt cgaacctcgc caacgtccac acgacgaaga cggcggcggg cggccccttc
      601 aagcgcctgg atccggtgtt cgaggcggtc ggcctgcaat cgaacgacga gccttactcg
      661 gccgacagcg gcgtctcgct cgtcaacgtc gcgcgcatcg ccgaggacaa gcggccgggc
      721 acgctggtgt acgagcccgg aaatcccgac gccaacgccg gcggctacgt cgaatacccg
      781 aacgtcaacg ccgtcgagga aatggtcaac atgatcaccg cctcgcgtgc gtacgaggcc
      841 ggcatcacct cgatcgacag cgtgaagcag atggcgcgct cggcgctctc gatcgccaag
      901 tgagaagacg cgcgtaatcc gtcatgggcc ccatcgactc cgccggcatt ccactcctcg
      961 ccccgcatct cgcgcgggaa gtggagacgc ccgcgccgaa ggtggacgcg gacggctttg
     1021 cgtcgctcgt caaggaagcg gtcgtcaaga cgaacgatca gatccagcgc gcggagaacg
     1081 ctggcagcga attcgcggcg ggccgcgtcg acgacattca cggcacgatg ctcgagctca
     1141 gcaaggcgga catcgagctt cgcttcgccg gcaacgtgcg caacaaagtg accgacgctt
     1201 tctacgagct ctggcggatg cagatctgat ggtcgcgcgc gttcccaggc cggaggcccc
     1261 gtgtgaagga aggctccgct gatgcccgaa ccgatcaaga acgtgctcgc gcagctcgcg
     1321 aatttctggc gcggactttc gacgcccaag cgcgtcgcgc tgctcgtggc gacgctaggc
     1381 gtgctcttgc tcggcctggg cgtcgtgctg ctcgaaacgc acgagcagta ttcctatctc
     1441 tacaccgagc tttcgaccga agacacggcc gccgtcgtcg agaagctcaa ggccggccag
     1501 gtgccctatc ggctcgacgc gtccggcacc cgcatcgaag tgcccgaaga gcgcgtccac
     1561 gagctccggc tcgagctcgc ctccgcgggt ctgccgcgcg gcggcggcgt gggtttcgaa
     1621 attttcgaca aatcccagct tggcagcacg gaattcgagc agcaagtgaa cctccggcgc
     1681 gcgctcgaag gcgagctcag ccgctcgatc ggcacgctgc gcggcgtgca atccgcgcgc
     1741 gttcacctcg tgatccccga gcggcgcttg ttcgtggcgg ggcaggagcg cgcgtccgcg
     1801 tccgtcgttt tgaagctgcg ctcgcccgaa gccgccacgc gcgaagaggt cgcgggcatc
     1861 gtgcatttgg tcgcgagcgc cgtccccgga ttgagccgcg atcgcgtctc ggtcgtgagc
     1921 tccgacggcg tgacgttgca tcgtccgaac ttcgacggtg aagccaactc cggctcgagc
     1981 gatctcgccg agcagggcca ggtcatgggc tcacagctcg aagtggccgc gcgcgagcag
     2041 ctcgagcgcg tcgtgggccc ggggctcgcc gacgtgcgcg tcaacgtcgc catcaactcg
     2101 gcgacccgcg aaaagacgag cgagctttac gacaaagaca cgatcgcgct ccggagcgag
     2161 cacaaagtcg aggagatgac cggcggtaac cagctcgcca tcgccggcgt ccccggcgcc
     2221 cagagtaacc tccccgacgc gaaaaccgac gcgcccgatc cgaccccggc ccccgcgggc
     2281 tccggcggcg tgttccgccg cacgcaaacc cgtaactggg aggtcgatcg cgtggtcgag
     2341 aagacctcga cgcccccggg cgaagtgcgg cgcatgagcg ttgccgtgct ggtcgacgag
     2401 aaccgggtgc tcaaaggtgg gaagctggtg gtcgtcccgc gtacctcgga agagctcgtg
     2461 gcgctcgagg acatcgtcaa gaaagccgtc ggctttgacg ccgagcgtgg cgattctttg
     2521 acgctcaagg cgctcgcgtt ccaccacgac gacatgaccg acgtcacgaa agtgacggac
     2581 ctgccggtct ggcggcgcta cctgccgttc gcggctctcg gcgcggtggt gctggtggcg
     2641 ctcttcgtgc tctcgctccg cagcaagcac gcgaagcaac tcgccgcgat ccggcgtgcg
     2701 gccgagctca aagcagccca gcgcgcgagc gcgctgcccg cccccgcttc gtcggcccac
     2761 ctgcccgcgt cgcccgagga ggcgctcgac gccctcccgg ccgtcgatta ccgcgcgaaa
     2821 gctctcgagc tcgcgagccg cgatccagcg acggcttcgc tcgtcctcaa agcctggctc
     2881 gccgagggca ccgacgctgc ggcggcggcc ctcccgctcc cggccaaggc atgagtcacg
     2941 ggcggcacgc ctttcgcaac ggagtgaccg attcctgaga tggcgctcaa cggtcccgag
     3001 aaggcggtcc tgctcttgct ctccctcgag gagagcgtgg cgacgccgat catcgcggac
     3061 ttggcgcccg ccgagctccg gcgtctgcgt gaagtcgccg cgaacatgag ctcggtgccg
     3121 acggacgcgc tcagtaacgt ttatgccgag ttcgtgagcc gaacgcagcg cgccgtcgcc
     3181 gtgccgcgcg gcggcgtgcg gcacctacac aacatcgccg ttcgcgcgct cggcagcgtc
     3241 aaagcgcagg aaatgttcgc cgaagcgcct cagaccgcga tgcagcgcct cgcgacggcc
     3301 gatcccacgc aactggccgg cttgctcgag agcgagcacc cgcagctcac cgcggcgctg
     3361 ctgtcgcaac tcgatcccgc caaggcggcg aagacgctcg acgcgctgcc cgaacacgtg
     3421 cggccgctcg tgttggctcg cctcggctcg atgaccgagg tgccgtccga actgctcgaa
     3481 gaagcggcca tggcgctcgg cgccgagctc ccggctgcca aagcggagtc ctcgctcaac
     3541 gtcgacggcc tcgcgtactc ggcgcagctc gtgcgcaagc tcggccggca gaagggcgcc
     3601 gcgctgctcg agaagctcga gaccgagaac ggcgagctcg cgcgccaaat ccgcggctcg
     3661 ctctactcgt tcgaggatct cttggccgtc gatgccaagg ggatgcgtct cttgctcgaa
     3721 tccgtgccgg tcgagcgcct gacgctcgcg ctcaagacgg cctccgagac gatggtgcag
     3781 cacgtgttca gcagcatgtc caagcgcgcc gccgagcgca ttaaagagga catggaagcc
     3841 atcggcaccg cgcggctctc cgatgtcgaa gccgcgcagc gcgaaatcct cgaagttgcg
     3901 ctgcgcctcg acgccgaagg tcagatctcg ctggagacgg gtcaggatgg cggctgagag
     3961 cgggcctccg gcggcgcgcc gcgccttgtt caccgaagtg aacgccgagc ggccgcgccg
     4021 cgccgagttc acgaacgtca cgccggatcg cccgcgtaaa aagccgcgct ggctctcggc
     4081 gcgcgagtcg acggtcccgc cgcttgcgcc gcctccgcag tcgcagccgc gcgcggccga
     4141 agcgccgagt ttgaagcctg cgcccgtgcc gagggagttc gtgcaggcga tgcggcgcga
     4201 gctgcgcacg ttgccgaatg cgtctcacga aatcgcgcgc gacctcgcgc agaacgaagc
     4261 gctcgctcag gaaatggcgc gttcgctccg tccctcggag ctgccgccgc cgggcttttc
     4321 gccccccggt ttcgcgccgc ccgtcgcgga cgctcgctcc gatcccggac tcgaacgcgc
     4381 cttccgcgct gcgatcgagg agatggcaag catgcgcagc aaagtgctcg aggccgccgc
     4441 gcacgagctc gcgacgctcg ccgcgatcat cgcgcgccgc gtgatcgcgc gcgaactcca
     4501 gctcgcgccc gcgatcctcg aagacctggt gcgcgaggcg ctcgaggcgt tgagcgaaca
     4561 agatcgcatc gtcgtgcgcg tcggtcgcgg cttccaaaac gcggtcgacg gactcgagca
     4621 gaagctcgcc ggccggagcg gcaactttcg cgtcaggctc gaggcgggac tcggcgacta
     4681 tgactgcatc gtcgagaccg agctcggtca ggtcgacgaa tccgtggaaa agcgcctcga
     4741 aaagctgctc gaagcgctca agcccgactc ggaggcgccg tgacgctcgg cgcgctgatc
     4801 gagcgctgcg agagcgtgcc gctgcacgtg ccgtacggca ccgtgctcga cgtcgtcggt
     4861 ctgatcgtgg aaatcggcgg gctcaaagcc gccgtcggcg aaacgctctc gatcgtcgcg
     4921 tcgcccacgc agtcgctcga cgtcgaagtc gtcggttttc gcggcggacg cttgctcgcg
     4981 acgccgctcg gaccgctcgc gggcgtgcga ccgggcgctc gcgtcgcgcg acgtcaccgc
     5041 ggccccacgg tgcccgtctc ggac
//
LOCUS       DATIML010001136         8782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3986124, whole genome shotgun sequence.
ACCESSION   DATIML010001136 DATIML010000000
VERSION     DATIML010001136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8782
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3986124"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VLJ38_19550"
     CDS             <1..217
                     /locus_tag="VLJ38_19550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41788.1"
                     /translation="GAGVVESFIGLLHLTWSALDAEHDLGRKFGFDSTEFMNGVAQKL
                     GEKRTTPELLAACVGGALDVLRPEAVP"
     gene            217..1644
                     /locus_tag="VLJ38_19555"
     CDS             217..1644
                     /locus_tag="VLJ38_19555"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU41789.1"
                     /translation="MTIPAPRDRVEELTVGGGARLEELVDRESLGQLAASFADLSGVG
                     VRVFDGEGKLLADAALAVELISYLMTLRQAKSAVESTVSSVKNLDPGPVGQASMDGVS
                     GGRYRVIALEHDGRRVGRLVFGPYFPPSLRDIPSALIELEPQLDLDRARGLLTLAPRV
                     SDDTMDRMAKHARATLDVVMFSGLRALLTGSMHLAAVRESYRELQSKQEKLQVAYDRL
                     KELDRLKSNFLATVSHELRTPLTSIIGYSEMLLEGIAGEIVGEQREFVTTIREKGEQL
                     LGLIKGLLDLSKLESGTMSLRKATMEVAPLVRDVAQTMAPHAKKKGITLHVALEPALP
                     ALWADAERLRQVFLNLVENAIKFTPAAGSVTISARAAAMAALGGGGDDGGLVLLGAQR
                     AAVQFRVADSGIGIPESERQRVFDAFYQVDSSSTREQGGTGLGLSIVKRLVEGHEGTV
                     HVEANEPQGTAFVVTIPLKRATLRP"
     gene            1641..2618
                     /gene="thiL"
                     /locus_tag="VLJ38_19560"
     CDS             1641..2618
                     /gene="thiL"
                     /locus_tag="VLJ38_19560"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HSU41790.1"
                     /translation="MKRPPAASRRLDEAQAVALFRRTFAAPRARGVLTGIGDDAAVLA
                     APAAPLVVTVDASVEGTHFRRDFVALADIGFRAFQAAASDLAAMGARPLAAVSALTLP
                     RDFSASELAELTRGQAEASRVTGCPLVGGNVARAELLTLTTTVLGTAERPLPRSGARP
                     GDECWLVGEVGLAAAGLALLQRGKRRNGSAEQRCVRAWQRPCALIARGLGLVRVAHAA
                     VDVSDGLAGDAAHLASASGCRLVLEEDAVRAALPAALVTVALRLGKDPLGLALYGGED
                     YALVAAGPRAARPRWARRIGRFERGRGAFLENDGERRAPLGGGFDHFKR"
     gene            complement(2623..3051)
                     /locus_tag="VLJ38_19565"
     CDS             complement(2623..3051)
                     /locus_tag="VLJ38_19565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSU41791.1"
                     /translation="MSQRFSPFTPFGAGLILAAVFVGFTGCKKEEPPPPMPSAAPAPT
                     PTPTEALTLVPETPVVDAGPEDAGATAHHGGTSGGAGLAKCCAALASNAALAPSPNKE
                     YLQAAAQACSIAVGAGASNASVLAAVQGALRGAGMPASCK"
     gene            complement(3170..4216)
                     /locus_tag="VLJ38_19570"
     CDS             complement(3170..4216)
                     /locus_tag="VLJ38_19570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41792.1"
                     /translation="MRFFVPFRATALGLMLAFGSASARGETSSALAAAEAAYVAVDFE
                     GTRSASENALNEGNHDPTETLRLYTLLGIATATLGQEAEAREAFRRVLGIDPDAGLDK
                     ELSPKIRSPYLEVRGELSAKGQLTRLSAHAVRHGGRLFVELNDPASIAAGIDVAYRAS
                     ASPAVTHFHVPRGQEAMASSLVSDTSRVEYTLTVRDGYGNALFRLGSEATPEVIEPDP
                     NARDAEARVAKQSRRPYYVAAGLLAGAGVAAGATAVFFHVRRQDAASEWNSAACEEPG
                     STRGQQCADVDDRRKRDQNVAIGLYAASGALLLSSIITLVVAPSSRAESAAARSLPCV
                     PGLGTLGALCHITF"
     gene            complement(4255..6012)
                     /locus_tag="VLJ38_19575"
     CDS             complement(4255..6012)
                     /locus_tag="VLJ38_19575"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41793.1"
                     /translation="MSSAARPLPAPTQPLAELEDHQLLARIGRGGMAEIFLARRPGPA
                     GTELVVIKRLLPEDAEDPVILRMFADEARLALRLGHPSIVRALGLGMLEERDALVLEF
                     LEGQTLHVVMRRAAEYDRQLPVEALVPLFADVAEALHYAHELADEGGRPLNVVHRDVS
                     PHNLFVTTAGTVKLLDFGIAKTALQENRTRTGLLKGKVAYMAPEQALGARVDRRADVW
                     SLGVSLWEALAGTRLFKADNEAASLRLTLSGPIAKPSSVRPEIPSEIDRIVLRSLQRE
                     PAQRYASAAIMAEELRAWARRQQVPMIAPARGIMTELFERDTAEQRARISGLLIQPEN
                     VPISSTVPVLTKLPPVETVGASHVSTVTEFLGQLEERQRSAQRRMRALVAVLTAGVLA
                     LGYALFAHGGGQTEALAPTAPQPVAQFGSTPLDNSRVAPVARDEAPSAPAEAPTAAPT
                     SRLAAPNGNEGSPRHRGTETPKDSPPASAALSPALPTTAEAPREPEPAPEPKRSARAA
                     ATSEHADIEFGFLTLDSTPWSQVSADGTPLGQTPIVRARLSAGPHTLVLTNSERGLSS
                     TYQITIEAGKTSVRRVGLD"
     gene            6217..7992
                     /locus_tag="VLJ38_19580"
     CDS             6217..7992
                     /locus_tag="VLJ38_19580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41794.1"
                     /translation="MNVTLRLVSGTLLLASVLSCCTKLESSSDTFGSGGILLGSGAAT
                     SSGGSGGTSTPGGSFPGGDASGENGGDIGQSGAPEAAGGTRNGAGGMFSSGGEGGQGN
                     ESASAGASGSSECIDEAGFNGAGCYRCTPSDVVTLEQACTEAICTSFDNSSRLTQLGS
                     DGRLPSLPDVAAGAGGVGGAAGAGQGGNGNAGSAGAGYACRDLSRSGTVVYVTGSSAA
                     KPFLQQIAQQLATDGVFIVYTSTGSCVGVDAVVNGTRMTTGAAPAPAATATYWESSSS
                     SGKACDLSSSGVTADLGVSDVFAQTCPGFELTDLDAKDVRDAHGPIQTMTFAVPASSP
                     YSEISAQAAYFVFGFGSGGGVLDPMQAHPIWNDEKFIFQRSAASGTQSMLATAIGVPS
                     GRWRGKAHKTSDDVAADLASAGADETTAASAIGILAADYIDTKNLRAQIRMLAYQDTR
                     GPCAVYPDSSAGARDKQNVRDGHYPIWGPLHFLYKVDQSGDPVNADNRQQVLDIVGYL
                     SGSKPLPNGVQLLDVYAQSGLVPECAMRVTRTSDGGDITPHDPPNPCACLFDAKATGG
                     TSCTPCTVQGDCAKSETCSEGYCEK"
     gene            complement(8031..>8782)
                     /locus_tag="VLJ38_19585"
     CDS             complement(8031..>8782)
                     /locus_tag="VLJ38_19585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41795.1"
                     /translation="AAFAPRFEAQVKEYLTKVMGDRAAARREALRRFQLAADERTVSE
                     DPSAIATLPSQSGGSLRAILIDNALVEITPATTPEQPAVVVVRRASDLPTRPGARARR
                     RGGLALALGAMATLAVAAFAGVRLTHLHASAAASAAPSVGDDMLARDAAPSAAARDAA
                     SGLRGNGAPASSSQRTPTSASAQPSATATPAPNGNDSRDRHAQGDVTATHNDAPAARS
                     MTATHGPTPPHGAKKPHKAASSDLMAPEYAK"
BASE COUNT         1303 a         2939 c         3118 g         1422 t
ORIGIN      
        1 cggcgcgggc gtcgtcgagt ccttcatcgg cctcttgcat ctgacgtgga gcgcgctcga
       61 tgcagagcac gatctcggcc gcaaattcgg cttcgactcc accgagttca tgaacggcgt
      121 ggctcagaag ctcggggaga aacgcacgac gccggagctg ctcgccgcct gtgtcggcgg
      181 cgcgctcgac gtgctccggc cggaggccgt gccctaatga cgattccggc ccctcgcgat
      241 cgcgtcgagg agctcacggt cggtggggga gcccgcctcg aagagctggt cgaccgcgag
      301 agccttgggc agttggcggc aagcttcgcc gacctgtcgg gcgtgggggt gcgcgtcttc
      361 gacggcgagg gcaagctgct cgcggacgcg gcgctcgccg tcgagctcat ctcgtatctc
      421 atgaccttgc gccaggcgaa gagcgcggtc gagagcaccg tgagctcggt gaagaacctc
      481 gacccgggac cggtgggtca ggccagcatg gatggcgtga gcggcgggcg ctatcgcgtg
      541 atcgcgctcg agcacgacgg ccgtcgtgtc ggtcgtctcg tgttcgggcc gtacttcccg
      601 ccgtcgctgc gcgacattcc ttccgctttg atcgagctcg agccccagct cgatctcgat
      661 cgtgcgcgcg gcctgctcac gctcgctccg cgcgtgagcg acgacacgat ggatcgcatg
      721 gccaagcacg cccgagccac gctcgatgtc gtgatgttca gcggcttgcg cgccctcttg
      781 acgggcagca tgcacttggc cgccgtgcgc gagagttacc gcgagctcca atcgaagcag
      841 gagaagctgc aggtcgccta cgatcgcttg aaagagctcg atcggctcaa gagcaacttc
      901 ctcgcgaccg tgtcgcacga gcttagaacg ccgctcacgt cgatcatcgg ctacagcgag
      961 atgctgctcg agggcatcgc cggtgaaatc gtgggcgaac aacgcgagtt cgtcacgacc
     1021 attcgcgaga agggcgagca gctgctcgga ctgatcaagg gtttgctcga cctgtcgaag
     1081 ctcgagagcg gcacgatgag cctgcggaaa gccacgatgg aggttgcgcc gctcgtgcgc
     1141 gacgtggcgc agacgatggc gccgcacgcc aagaagaaag ggatcacgct gcacgtcgcg
     1201 ctcgaacccg cgctgcctgc gctctgggcc gacgccgaac ggctccgcca ggtctttttg
     1261 aacctcgtcg aaaatgcgat caagttcacg cctgcagcgg gcagcgtcac gatttcggcg
     1321 cgtgccgcgg ccatggccgc cctcggtggc ggcggcgacg atggcgggct cgtcttgctc
     1381 ggtgctcagc gcgcggcggt gcagtttcgt gtcgccgaca gcggcatcgg tatcccggaa
     1441 tccgagcgcc agcgcgtgtt cgacgcgttc tatcaggtcg attcgagctc gacgcgcgaa
     1501 cagggcggga cgggcctcgg cttgtcgatc gtcaagcgcc tcgtcgaggg acacgaaggc
     1561 acggtgcacg tcgaagcgaa cgagccgcaa ggcacggcct tcgtcgtgac gattccgctc
     1621 aagcgcgcca ccctccggcc atgaagcggc ccccggcggc ctcccgtcgc ctcgacgaag
     1681 cgcaggcggt ggcgctcttt cgtcgaacct tcgccgcgcc gcgcgcacgc ggcgtgctca
     1741 cgggtatcgg tgatgacgcg gccgtgctcg ccgcgccggc cgcgccgctc gtcgtgaccg
     1801 tcgacgcgag cgtcgaaggg acgcactttc ggcgtgactt cgtcgcgctc gcggacatcg
     1861 ggtttcgcgc gttccaagcg gcggcgagcg atctggccgc catgggtgcg cgcccgctcg
     1921 cggccgtctc ggcgttgact ctgccgcgcg acttcagcgc gagcgagctc gcggagctca
     1981 cgcgcggcca agccgaggcg tcgcgcgtca ccggctgccc actggtcggc ggtaacgtag
     2041 cgcgcgccga gctgctcacg ctcacgacga ccgtgctcgg cacggcggaa cgcccgctcc
     2101 cgcgcagcgg cgcgcgtccg ggcgacgagt gttggctcgt gggtgaggtg ggactcgccg
     2161 ccgcggggct cgctctcttg cagcgcggga agcgacggaa tgggagcgcg gagcagcgtt
     2221 gcgtgcgcgc gtggcaaagg ccgtgcgcgc tcatcgcgcg gggactcggg ctcgtacgcg
     2281 tggcacacgc cgcggtcgac gtttcggacg ggcttgccgg cgacgccgcc catttggcaa
     2341 gtgcgagcgg ctgtcggctc gtgctcgaag aggacgccgt gcgagctgcg ctccccgccg
     2401 cgctcgtcac ggtcgcgctg cgattgggca aggatcccct cggactcgcg ctttatggcg
     2461 gcgaagacta tgcgctcgtc gccgccgggc cgcgcgccgc gcgaccgcgc tgggcgcgtc
     2521 gcatcggacg tttcgagcgc gggcgcgggg ccttcctcga aaacgacggc gagcggcgcg
     2581 cacccctagg tggcggcttc gatcatttca aacgctgagc ctttacttgc acgaggccgg
     2641 catgccggcg ccgcggagcg cgccctgtac ggccgcgagc accgacgcgt tgctggcgcc
     2701 ggcgccgacc gcgatcgagc aggcttgggc tgcggcctgc aggtattctt tgttcggtga
     2761 cggggcgagc gctgcgttcg aggcgagcgc tgcgcaacat ttggcgagtc ccgcgccgcc
     2821 gctcgttccg ccgtggtgcg ccgtcgcgcc cgcgtcttcc ggtcccgcgt ccacgacggg
     2881 tgtctccggc acgagcgtga gcgcctcggt gggcgtcggc gtgggggcgg gcgccgcgga
     2941 cggcatgggc ggcggcggct cttccttctt gcagccggtg aagccgacga agaccgcggc
     3001 caaaatcaaa ccagcgccga agggagtgaa gggcgaaaag cgttgcgaca tatctgcctc
     3061 cgttcccttt ctactcggga tggctcggga aaaccaagtc ctcgcatggc gggcggctcc
     3121 agcccgtgca cgcggcgaaa tggctggact cgacaggccg ggccggcgtt cagaacgtga
     3181 tgtggcagag ggcaccgagc gtgcctaggc ctggaacgca gggcagggat cgcgccgccg
     3241 ccgattcggc ccgtgagctt ggtgcgacga ccagggtaat gatgctgctc aggagcaggg
     3301 cgccgctcgc ggcgtacaga ccgatcgcga cgttctggtc gcgcttgcgg cggtcatcca
     3361 cgtcggcgca ctgctggcct cgcgtcgagc ctggctcttc acaagccgcg ctgttccatt
     3421 cgctggccgc gtcctgccgc ctcacgtgaa aaaagacggc cgttgctccc gccgcgacgc
     3481 ccgcgcccgc gagtaacccc gccgcgacgt aataggggcg gcggctctgc ttcgcgacgc
     3541 gagcttcagc gtcgcgcgcg ttcggatccg gttcgatcac ctccggagtc gcttcgctgc
     3601 cgagtcggaa gagcgcgttg ccgtagccgt cgcggaccgt gagcgtgtac tcgacgcggc
     3661 tcgtgtccga gaccaggctg ctcgccatcg cttcttgacc gcgcggcacg tggaaatgcg
     3721 tcaccgccgg tgaggcgctg gcgcggtagg ccacgtcgat gccggcggcg atgctcgccg
     3781 gatcgttcag ctcgacgaac aagcggccgc cgtgccgcac ggcatgagcg ctcaagcgag
     3841 tcaattggcc tttcgccgag agctcaccgc gcacttcgag gtacggtgag cggatcttcg
     3901 gtgacagctc tttgtcgagc ccggcgtccg ggtcgatgcc gagcacgcgc cggaacgcct
     3961 cgcgcgcttc cgcttcttgg ccgagcgtcg ccgtggcgat accgagcagc gtgtagaggc
     4021 gcagtgtctc cgtcgggtcg tggttgcctt cgttgagcgc gttctcgctc gccgagcgcg
     4081 tgccctcgaa gtcgaccgcg acgtacgcgg cctcggccgc ggcgagcgcc gagctcgttt
     4141 cgccgcgcgc cgaggcgctg ccgaatgcca gcatgaggcc gagagcggtc gcgcggaacg
     4201 ggacgaagaa tctcatcgag gcgtgtggtc gcgggctcta gccgagctcg tcgctcaatc
     4261 gaggcccacg cggcgtacgc tagtcttacc ggcctcgatc gtgatttggt acgtcgacga
     4321 caggccgcgc tcgctgttgg tgagcacgag cgtgtgcgga ccggccgata gcctggcgcg
     4381 gacgatgggt gtttgaccga gcggtgtccc gtcggccgac acctgcgacc aaggggtgct
     4441 gtcgagggtc aaaaagccga attcgatgtc ggcgtgctcc gaggtcgcgg cggcacgcgc
     4501 gctgcgcttc ggttcggggg caggctcggg ctcacgcggc gcttcggcgg tcgtcggaag
     4561 ggcgggcgag agcgctgcgc tcgccggcgg ggagtctttg ggcgtttcgg tgccccgatg
     4621 cctgggggac ccttcgttgc cgttcggtgc agcgaggcgg ctcgtcggcg cagccgtggg
     4681 agcttcggcc ggcgctgagg gcgcttcgtc gcgggccacg ggagccaccc tggagttgtc
     4741 cagtggcgtg ctgccgaact gcgcaaccgg ttgcggtgcg gtcggagcga gcgcttcggt
     4801 ctggccgccg ccatgcgcaa agagcgcgta gccgagcgcc agcacgccgg ccgtcaacac
     4861 tgcgacgagc gcgcgcatgc gacgctgcgc gctccgttgt cgctcctcga gctggcccag
     4921 aaattcggtg accgtcgaga cgtgacttgc gccgaccgtt tccaccggcg gcagcttggt
     4981 cagcacgggc accgtgctcg agatcggcac gttttccggt tggatcagga gcccgctgat
     5041 gcgcgctcgc tgctccgccg tatcgcgctc gaagagctcc gtcatgatgc cgcgcgccgg
     5101 cgcgatcatc ggcacttgct ggcggcgcgc ccacgcgcgc agctcctcgg ccatgatggc
     5161 ggccgaggcg taacgttgcg cgggctcgcg ctgcagtgac ctgagtacga tgcggtcgat
     5221 ttcgctcggg atttcgggcc tgacgctcga cggcttcgcg atcgggcccg acaacgtgag
     5281 ccgcaacgaa gccgcctcgt tatcggcctt gaaaagcctg gtgcccgcga gcgcctccca
     5341 caagctcacg cccaagctcc agacgtcggc ccggcgatcg acccgcgcgc cgagtgcttg
     5401 ctcgggggcc atgtacgcga ctttcccctt gagcagtccc gtgcgcgtcc ggttctcctg
     5461 cagtgccgtc ttcgcaatgc cgaagtcgag cagcttcacc gtgccggccg tcgtgacgaa
     5521 caggttgtgc ggcgacacgt cgcggtgcac gacgttgagc gggcggcccc cttcgtccgc
     5581 gagctcgtgc gcgtaatgga gggcttcggc cacgtcggcg aacagcggta ccagcgcttc
     5641 gaccggcagc tggcgatcgt attcggctgc ccggcgcatc acgacgtgga gcgtctgccc
     5701 ctccaagaac tcgagcacga gggcatcccg ctcctcgagc atgccgagcc cgagcgcgcg
     5761 cacgatgctc ggatgtccga gcctgagcgc gaggcgcgcc tcgtccgcga acatgcgcaa
     5821 aatgacgggg tcctcggcgt cctcgggcaa gaggcgcttg atcacgacga gctcggtccc
     5881 cgcgggaccg gggcggcgcg cgaggaaaat ctcggccatc ccgccgcgcc cgatgcgcgc
     5941 caggagctga tggtcctcga gctctgcgag gggctgcgtc ggcgcgggga gtggtcgggc
     6001 ggcggaggac acggaaaacc ccctggttat actcaaaaca ttactatctt gccgggaagc
     6061 tcgcgtcatc gaccctgcaa catttgggtg actacgaacc gctcgctcgt tccggaacgc
     6121 actcgtgaca cgaggagcat atcatcgtaa acgcaaagcg agcggcgcga ccactctcgc
     6181 gcgctcctgg tcgccgcgaa gagatcatcc gcacgcatga acgtcaccct gcgcctggtt
     6241 tcaggaacgc tgctgctcgc ttcagtgctt tcatgctgca ccaagctcga gagctctagc
     6301 gatacgttcg gttcgggcgg cattttgctc ggcagtgggg ccgccacgag tagcggcggg
     6361 agcgggggta ctagcactcc agggggtagt tttccgggcg gcgacgcaag tggcgagaac
     6421 ggcggggata tcgggcagag cggcgctcca gaggcagcgg gcggcacgcg gaacggcgct
     6481 ggtggaatgt tttcctcagg cggtgaagga ggccagggga atgagagcgc cagcgccggc
     6541 gcgagcggca gctccgaatg catcgatgaa gcgggcttta acggtgcggg ctgctaccgc
     6601 tgcaccccgt ccgacgtggt gacgctcgag caagcgtgca ccgaagcgat atgtacgagc
     6661 ttcgataact cctcgcgcct cacgcagctt gggagcgacg gccggctgcc cagtttgccg
     6721 gacgttgccg ccggggcggg cggcgtcggt ggtgcggccg gcgccgggca gggaggcaac
     6781 gggaatgcgg ggagtgcggg ggcgggttac gcctgtcgcg acctttcgcg ctcggggacc
     6841 gtcgtctacg tgacgggctc ttcggcggcg aagccgttct tgcagcagat cgcgcagcag
     6901 ctcgcgaccg acggcgtctt catcgtctac acgtcgacgg gctcgtgcgt cggggtggac
     6961 gccgtcgtga acgggacgcg catgacgacg ggcgcggcgc cggctccagc ggccacggcg
     7021 acttactggg agagctcgtc cagtagcggc aaggcttgtg atttgtcctc gagcggcgtc
     7081 acggccgatc tcggtgtctc cgacgttttc gcgcagacgt gtcccggctt cgagctcacc
     7141 gatctcgacg ccaaggacgt tcgcgacgcg cacgggccga tccaaacgat gacgttcgcc
     7201 gtgccggcca gctccccgta cagcgagatt agcgcgcagg cggcgtactt cgtgttcggc
     7261 ttcggctcgg ggggcggcgt gctcgatccg atgcaagccc atcccatctg gaacgacgaa
     7321 aaattcatct ttcagcgcag cgccgcgtcc ggcacgcaat ccatgctcgc gactgccatt
     7381 ggcgtgccgt ccgggcgctg gcgcggcaaa gcccacaaaa cctcggacga cgttgccgcg
     7441 gatctggcca gcgccggcgc ggacgaaacg accgcggcga gcgcgattgg catactcgcc
     7501 gccgactaca tcgatacgaa gaacctgcgc gcccaaatca ggatgctcgc gtaccaagac
     7561 acgcgcggtc cttgcgcggt gtacccggat tcgagcgcgg gcgcgcgcga caagcaaaac
     7621 gtccgcgacg gccactaccc gatttggggt ccgctccact tcctctacaa ggtggatcag
     7681 tcgggcgacc cggtgaacgc ggacaatcgc cagcaagtgc tggatatcgt cgggtacctc
     7741 tccgggagca aacccctgcc gaacggcgta cagctactcg acgtctacgc ccaaagcggg
     7801 ctggtcccgg agtgcgcgat gcgcgtcacg cgcacgagcg acggcggcga catcacgccg
     7861 cacgacccgc ccaatccctg cgcgtgtcta ttcgatgcga aggcgaccgg cggcacgagc
     7921 tgcacgccgt gcaccgtgca gggcgattgt gcgaagagcg aaacgtgctc cgaggggtac
     7981 tgcgaaaagt aacgcgctca cgagcgcgca gcgccggaag gaccggcgcg ctacttcgcg
     8041 tactcgggcg ccatgagatc ggatgatgcg gctttgtgcg gctttttcgc gccgtgcggc
     8101 ggcgtcgggc cgtgcgtcgc cgtcatactg cgcgccgcag gggcgtcgtt gtgcgtcgcc
     8161 gtgacatcac cttgcgcgtg acggtcccgc gagtcattcc cgttcggagc cggcgtcgcc
     8221 gtggcactcg gttgcgccga tgcgctcgtc ggcgttcgct ggctgctcga cgccggtgca
     8281 ccattaccgc gcaagccgct cgccgcgtcc ctggctgcgg cggacggagc cgcgtcacgc
     8341 gcgagcatgt cgtcaccgac cgacggcgcg gcgctcgccg cagcgctggc gtggaggtgc
     8401 gtcagacgaa ccccggcaaa cgccgcgacc gcgagcgtcg ccatagcgcc gagcgcgagc
     8461 gcgagccctc cgcggcggcg cgcccgcgcg ccgggacgcg tcggcaagtc actggctcgc
     8521 cgcacgacca ccaccgccgg ctgctcgggc gtggtcgctg gcgtgatctc gacgagcgcg
     8581 ttgtcgatca agatcgctct gagcgatcca ccgctctgcg acggaagcgt cgcaatcgcg
     8641 ctcggatcct cgctcaccgt tcgctcgtcg gccgcgagct gaaagcgccg cagcgcctcg
     8701 cgtcgcgccg cggcgcggtc gcccatcacc ttcgtgaggt actctttgac ctgcgcctcg
     8761 aagcgcggcg cgaaggcggc tg
//
LOCUS       DATIML010001137         3041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3986448, whole genome shotgun sequence.
ACCESSION   DATIML010001137 DATIML010000000
VERSION     DATIML010001137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3041
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3986448"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VLJ38_19590"
     CDS             complement(<1..222)
                     /locus_tag="VLJ38_19590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41796.1"
                     /translation="MGEMAIEAGATGGTIAGASVDEFRITMPATYGDVYAAEEIVEHA
                     SIVARRWLQPVHVELWRPLPAGGAVLCVVA"
     gene            complement(382..984)
                     /locus_tag="VLJ38_19595"
     CDS             complement(382..984)
                     /locus_tag="VLJ38_19595"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSU41797.1"
                     /translation="MSAGTHAAWLVDLDGTLYVQAPVRLAMAAELSLLGWPSLRFLRQ
                     FRREHEAVRELGLEGDPFRLQIERTAQALAASPSAVEATVRDWMIERPTKWLPLFRRR
                     ELLAELAAFRATGGRTALVSDYPARRKLEALGASGLFDVVVASGEPDGPTRLKPHPGG
                     MLRAAAALGIEPERCLVIGDRPDADGRAASAAGMAFRHVR"
     gene            complement(981..1877)
                     /locus_tag="VLJ38_19600"
     CDS             complement(981..1877)
                     /locus_tag="VLJ38_19600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine acetyltransferase"
                     /protein_id="HSU41798.1"
                     /translation="MPSAPDRIRELEQAIDGVVHSYDGPLEINNLESAALPNKRAVVL
                     ALNHLKPLIYMGFYSQRALSKDNLRYGVSEHMYPAYEALVEQIARAVSYEATFRSGPS
                     HPPGWSGDVVLRLLGRLKELRQVLNADVVAAYEGDPAATSIEEIVFSYPAIEAITTHR
                     IAHALHKEGVPIIPRIMAYHAHERTGIDIHPGATIDAGFFMDHGTGVVIGETAHLGKN
                     VKIYQGVTIGALSTRRGDSVRPLPKKRHPTIEDDVTIYAGATILGGETVIGKGSVIGG
                     NVWLTKSVEPYSKIFGRAKEVD"
     gene            complement(2113..>3041)
                     /locus_tag="VLJ38_19605"
     CDS             complement(2113..>3041)
                     /locus_tag="VLJ38_19605"
                     /inference="COORDINATES: protein motif:HMM:NF019268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSU41799.1"
                     /translation="YASWRPWNPIQLDFGKFDTIYGAEVAESQDDMNYTRGVVYWFTQ
                     PLFHTGLRVNAELSDNLTLRALLVNGWNNTIDNNLGKDLGLQLALTLPRSGDGGNLLS
                     TSLGYLGGPEQDDSATIQCDASTQYFDPSSPSGCSPGMGGATSGKVDRGSSNTKGLRH
                     LIDFVATLTPTDKLTVQLNADVDIERVRDTVDASRFVQHDWWGVMLGARYAFVDKFAA
                     AIRGEYLADPDAYGTGIAKLYAPTDPNAEPPSDIKLLTGTLTLDYRPAEFLILRLDNR
                     VDWSNKKIFPKSVRDLSGVMPTTTLGVVVTTN"
BASE COUNT          495 a          970 c         1033 g          543 t
ORIGIN      
        1 cgcgacgacg cacaaaacgg cgccgcctgc cggcaacggc cgccagagct cgacgtgtac
       61 cggctgcaac cagcggcgcg cgacgatgct cgcgtgctcg acgatttctt ccgctgcgta
      121 gacatcgcca tacgtcgccg gcatcgtgat tcgaaactca tcgacgctcg ctcccgctat
      181 ggtcccgccc gtcgcgcccg cctcgattgc catttcgccc atcactcgag cgagcatccg
      241 cgcgcgacgt tgcgcgatgc tttccgaggc gtgtcgctcg cgtgcgaaat cgcttaccag
      301 cgtgcgacga ctccggcgta gtagccgctc ggcgccgagt gcgccgaagt gggacaaggt
      361 gtgcgccacc aagtcgtgac gtcagcggac gtgacgaaac gccatgcctg cagcgctcgc
      421 agcgcgtccg tcggcgtccg ggcgatcgcc gatgacgagg cagcgctcag gctcgatccc
      481 gagcgccgcg gccgcgcgca gcatgccgcc cgggtgcggc ttcagccgcg tgggaccgtc
      541 gggctcgccg gaagcgacca cgacgtcgaa gagcccgctc gcgccgagcg cctcgagctt
      601 gcgccgcgcg ggatagtcgc tgacgagcgc cgtgcggcca cccgtcgcgc ggaacgccgc
      661 gagctcggcg aggagctcac gccgtcgaaa gagcggcagc cacttcgtgg ggcgctcgat
      721 catccagtcg cgcaccgtcg cttcgaccgc gctcggcgat gccgcgagcg cttgcgccgt
      781 gcgctcgatt tgcagccgaa aggggtcgcc ctcgaggcct agctcgcgga ccgcctcgtg
      841 ttcgcgccgg aattgccgca aaaagcgcag cgagggccag ccgagcagcg agagctccgc
      901 cgccatcgcg aggcgcaccg gcgcttgcac gtagagcgta ccgtcgagat cgacgagcca
      961 cgcggcgtgc gtgccggcgc tcaatcgact tccttggcgc ggccgaaaat cttggaatac
     1021 ggctccacgg atttcgtgag ccacacgttg ccgccgatga cggagccttt gccgatcacg
     1081 gtctcgccgc cgaggatggt cgcgcctgcg taaatggtca cgtcgtcttc gatcgtggga
     1141 tgccgtttct tcggcagcgg tcgcacgctg tcgccgcggc gcgtgctcaa agcgccgatc
     1201 gtgacgccct gataaatctt cacgttcttg ccgaggtgag cggtctcccc aatgacgacg
     1261 cccgtgccgt gatccatgaa aaaaccagcg tcgatcgtcg cgccggggtg gatgtcgatg
     1321 ccggtgcgct catgcgcgtg gtacgccatg atgcgcggga tgatcggcac gccttccttg
     1381 tgcagggcgt gcgcgatgcg atgcgtggtg atcgcctcga tcgccgggta actgaagacg
     1441 atctcttcga tgctcgtcgc cgcgggatcg ccttcgtagg cggcgacgac gtcggcattc
     1501 aagacttggc ggagctcctt cagccgtccg agcaaacgca agaccacgtc ccccgaccaa
     1561 ccgggcggat gcgaaggtcc ggagcggaac gtcgcttcgt acgaaacggc tcgcgcgatc
     1621 tgctcgacga gcgcctcgta cgcggggtac atgtgctcgc tcacgccgta gcgcaggttg
     1681 tccttgctga gcgcacgttg gctataaaac cccatgtaga tgaggggttt tagatggttg
     1741 agcgcgagca cgacggcacg tttgttcggg agcgccgcgc tttcgagatt gttgatctcg
     1801 agcggcccgt cgtagctgtg aacgacgccg tcgatggctt gctcgagctc ccggatgcgg
     1861 tcgggtgcgc tgggcatttt acactctata gcaccagggc cggcggacga cggctcggga
     1921 attggccgct agcagctcgc aactgtccga tcggagcgac ggaggcggag gatgaaaagg
     1981 aaggcggaag gtctggagga ttcgaggatt gctcgagcga agtcagcggc gcctgcaccg
     2041 aggtgcttca cttccgcctt cctgtgatcc cgctcgagtt gctgtccgca ccagctgcgc
     2101 tccgggacct acttagttcg tcgtgacgac gacgccgagc gtggtcgtcg gcatcacgcc
     2161 gctcaaatcg cgcactgatt tggggaagat cttcttgttg gaccagtcga cgcggttgtc
     2221 gagcctcagg atcaggaact ccgccgggcg atagtcgagc gtcaaagtgc cggtcaatag
     2281 cttgatgtcg ctcggcggct cggcgttagg atccgtcggc gcgtagagct ttgcgatgcc
     2341 cgtgccgtac gcgtcgggat cggccaggta ctcgccgcgg atggcggcgg cgaacttgtc
     2401 gacgaacgca tagcgcgcgc cgagcatcac gccccaccag tcgtgctgga cgaagcggga
     2461 ggcatcgacg gtgtcacgca cccgttcgat gtcgacgtcg gcgttgagct gcacggtgag
     2521 cttgtccgtc ggcgtgaggg tcgcgacgaa atcgatcagg tggcgcaagc ccttggtgtt
     2581 cgagctgccg cggtcgacct tgcccgaggt cgcgccgccc atgcccggcg agcagccgct
     2641 cggcgagctc ggatcgaaat attgcgtcga ggcgtcgcat tgaatcgtcg ccgaatcgtc
     2701 ttgttccggc ccgccgaggt agccgagcga agtcgaaagc aggttcccgc cgtcgcccga
     2761 gcgcggcagt gtgagcgcca gctgcaggcc gaggtccttg ccgaggttgt tgtcgatcgt
     2821 gttgttccaa ccgttcacga gcaaggcgcg gagcgtgagg ttgtcgctga gctcggcgtt
     2881 cacgcgcagg ccggtgtgga agagcggctg cgtgaaccag tacacgacgc cgcgtgtgta
     2941 gttcatgtcg tcctggctct ccgcgacttc tgcgccgtaa atcgtgtcga acttgccgaa
     3001 gtcgagttga atcggattcc aggggcgcca cgacgcgtag g
//
LOCUS       DATIML010001138         2048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3413329, whole genome shotgun sequence.
ACCESSION   DATIML010001138 DATIML010000000
VERSION     DATIML010001138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3413329"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VLJ38_19610"
     CDS             complement(<1..245)
                     /locus_tag="VLJ38_19610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M18 family aminopeptidase"
                     /protein_id="HSU41800.1"
                     /translation="MVAADSAELSDFMAFLDASPTPYHAAREVGARLARAGFGLLEEG
                     AGWKLDPGARGYVLRGGTLVAFVMGTTPPWESGFVVLG"
     gene            269..1291
                     /locus_tag="VLJ38_19615"
     CDS             269..1291
                     /locus_tag="VLJ38_19615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41801.1"
                     /translation="MFTRDVSLEGFTHEQWARLGDVFRPLDRPAHTAAGAAEGPNGGV
                     VAVTTGSTLRKVVSTRFGRIDVHEQPWPEALESLAARHGARWAAEISTGALDELMDRF
                     GERLSPGQDYLAQALEWLGIVRELEAERLLTLWPWRVADFPLPSERAVGRALDLLCPS
                     DKSLVLGVFEAGALSTCLVVRRRGSGFDRLVGPDELGRELGLLSGDFRRDHRHLALAV
                     EKRVGKIAVGCYGELHTFRELAGAHGPGAWARAVAAQEIVISPWMPAAVLPLGLDAGR
                     AVFHEIYALASRFGAGHFLSREGPLAQAFLSLERPAWLGDDVRQFLGFDPWDLLVKLF
                     ARGRGH"
     gene            1296..>2048
                     /locus_tag="VLJ38_19620"
     CDS             1296..>2048
                     /locus_tag="VLJ38_19620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41802.1"
                     /translation="MAPRFGIRRRLTFAILVTALIPVLVAVWLAETTVRQTAARFFVP
                     EVGAHLDRSLELYQELARTVKARMRSEALAIAADEALRHAAERRDRSAIERELKRLFG
                     GHQGLVSLAVRESDDAPAVEVTRGRPLDAGTENRFELVRSLGAVRAGAETSGHAAPSG
                     AETSRHPAAAPGRGETSPDGSAAGDDRADAPLVEDDEPATGAELVAVFAADKARFDEL
                     AEASQFVESYRRIESRRVADERGYVLAFAALLG"
BASE COUNT          276 a          725 c          727 g          320 t
ORIGIN      
        1 ccgagcacga cgaaacccga ctcccacggc ggtgtcgttc ccatgacgaa cgcgacgagc
       61 gtgccgcccc ggagcacgta gccccgtgcc cccgggtcga gcttccagcc ggcgccctcc
      121 tcgagcaggc cgaaccccgc acgggcgaga cgcgctccga cttcgcgcgc ggcatggtac
      181 ggcgtcggag acgcatcgag gaaggccatg aagtcggaaa gctcggcgct atcggcggcg
      241 accatggcag acgactatac tcgcgggcgt gttcacccgc gatgtctccc tcgaaggttt
      301 cactcacgag caatgggcgc ggctcggcga cgttttcagg ccgctcgatc ggcccgctca
      361 cacggccgcg ggcgctgccg agggcccgaa cggcggcgtc gtagccgtca cgacggggag
      421 cacgctgcgc aaggtcgtga gcactcgctt cggtcgcatc gacgttcacg aacagccttg
      481 gccggaggcg ctcgagtcgc ttgccgctcg tcacggggcg cgctgggccg cggaaatttc
      541 gacgggcgcg ctcgacgagc tcatggatcg cttcggtgag cgtctctcgc ccgggcagga
      601 ctaccttgcg caagcgctcg agtggctcgg gatcgtgcgt gagctcgaag ccgaacgtct
      661 gttgacgctc tggccgtggc gcgtcgcgga ctttcccctg ccgagcgagc gagcggtcgg
      721 ccgcgcgctc gatctcctgt gtccgagcga caaatcgctg gtgctcggcg tgttcgaagc
      781 tggcgcgctc tcgacctgcc tcgtcgtgcg gcgacgcggt agcggcttcg atcgcctggt
      841 gggacccgac gagctcgggc gtgagctcgg gcttttgtcg ggcgacttcc gccgtgatca
      901 ccggcacctc gctctggcgg tggaaaagcg cgtcggcaag atcgcggtcg gctgctacgg
      961 cgagctccac acgtttcgcg agctggccgg cgcgcacggg cccggagcgt gggcgcgcgc
     1021 cgtggccgcg caagaaatcg tgatctcgcc ttggatgccg gccgccgtgc tgccgctcgg
     1081 gctcgacgcc ggacgcgctg tctttcacga gatctacgcg ctcgcgagcc gcttcggcgc
     1141 gggtcacttc ttgtcgcgcg aggggccgct cgcgcaggcc ttcctctcgc tcgagcgccc
     1201 cgcgtggctc ggggacgacg tgcggcaatt tctcggtttc gacccctggg atttgctcgt
     1261 gaagctcttc gcgcgcggcc ggggacactg agcaattggc cccgcgcttc gggatccgcc
     1321 gccgcctgac cttcgcgatc ctggtcacgg cactcattcc ggtgctcgtc gccgtgtggc
     1381 tcgccgagac gacggtgcgc cagacggccg cacgcttctt cgtgcccgag gtcggcgcgc
     1441 acctcgatcg ctcgctcgag ctctaccagg agctcgctcg cacggtgaag gcgcggatga
     1501 ggagcgaagc tctggccatc gccgccgacg aggcgctgcg gcacgccgcg gaacgtcgcg
     1561 atcgttcggc gatcgagcgc gagctcaagc gcttgttcgg cggccaccag ggcctcgtct
     1621 cgctcgcggt gcgtgagagc gacgacgcgc cggccgttga agtcacgcgc ggccggccgc
     1681 tcgatgccgg taccgaaaat cggttcgaac tcgtgcgctc gctcggtgcc gttcgtgccg
     1741 gcgccgaaac gtcggggcac gccgcgccga gcggcgccga aacctcacgc cacccagcgg
     1801 ccgcgccggg ccgcggcgaa acgtcgccgg acggctccgc cgcgggcgac gatcgcgccg
     1861 acgcacccct cgtcgaagac gacgagcccg cgacgggcgc cgagctcgtc gccgtgttcg
     1921 ctgcggacaa agcgcgcttc gacgagctcg cggaagcgag ccagttcgtc gagagctacc
     1981 ggcgtatcga gagccggcgc gtcgccgacg agcgcggcta cgtgctcgcg ttcgcggcgc
     2041 tgctcggc
//
LOCUS       DATIML010001139         3030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_527487, whole genome shotgun sequence.
ACCESSION   DATIML010001139 DATIML010000000
VERSION     DATIML010001139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527487"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..559
                     /locus_tag="VLJ38_19625"
     CDS             <1..559
                     /locus_tag="VLJ38_19625"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41803.1"
                     /translation="LARRGAAGDHGATQSLLTMLWPSIARVVAGVLGSWHPDLDDTVQ
                     QSMLALAHALPSFRGECHPAGFGCRIAFRTACRARRRWQHDRARRDELEDVPESELAE
                     SPGDLAEAEQRRRILRELLASLPEEQAETLALRSVMGWSLEEVARATGAPLNTVRSRV
                     RLAKEALRRRIEARPELAAEVSLDP"
     gene            556..1488
                     /locus_tag="VLJ38_19630"
     CDS             556..1488
                     /locus_tag="VLJ38_19630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSU41804.1"
                     /translation="MSVVELHPEELIDKLEAGTLGAAERVRLDAHLAACDVCRFELGL
                     RRDLVDDLGAAGIPVPRAKVPRSARPQRESSIRLKASFLRRMRRWATGGGIAAALFIL
                     AAASFAAYAARAAWSQRNAAPSTTRGPERHAVLAAPQAQRNASGTLPSVARASADAVP
                     APVPLDSLPASPQPVGSAPAAFGARGPSAAALFSEANEARRTGDTARAIDLYWTLERR
                     HPTSQEGILSHVLVARVLSNRDPSGALAEFDAYLATGAPSLAAEAWVGRARALAALGR
                     DAESHAAWQQVLARYPESVYADEARSTLGILRPP"
     gene            1485..2687
                     /locus_tag="VLJ38_19635"
     CDS             1485..2687
                     /locus_tag="VLJ38_19635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41805.1"
                     /translation="MSAPRVAFTALFIGVVAAGLAAPAPALALTPVPASSPRPIVEIH
                     VEGDRATLERVRVVASELLGELSVTPVVADDGPGVPPAGDERRESAFVRAYFDFRDTP
                     TTIVIVDGASRRELDRRSLPPNTTLEAAVESAVHVLFMLVESLLDEQTAPPAEAPRAP
                     VHAEPDAANGAVSPERVAPVATPPPATAPRAAATADTGVSDARARGKSEPSVGLAAGV
                     LARVLHFGAGQMLPSAGAQVELSFPRARPRFGAAGYFVASAPFVLSSRDATAKLYPFS
                     SGLLPNVEFELGADFSAVVGGGVVLTWFSLSSAGPAGAAIGHSTGGLDTALSAMLGLR
                     ARTGPRFSLSLVAAVDYDLEPRSFVALDGRERHVLGTLAQWRPSLSIVVAYSLFGGRT
                     RTNVAEAD"
     gene            2687..>3030
                     /locus_tag="VLJ38_19640"
     CDS             2687..>3030
                     /locus_tag="VLJ38_19640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41806.1"
                     /translation="MRTGRGVLMCWFVVTACANEDVVLFEFRGGGAAGASGMQSASGT
                     GGTANGGSAASTDVSTAGAADIAAGDVTGAPSPPPSCRSNGDCPYGWSCEKLNCTDVT
                     GSCIARPVCSDQT"
BASE COUNT          384 a         1076 c         1091 g          479 t
ORIGIN      
        1 gcttgctcgg cggggtgctg ccggggacca cggcgccacg cagtcgctgc tcacgatgct
       61 gtggccttcc atcgcgcgag tggtcgcggg cgtgctcgga tcgtggcacc ccgatttgga
      121 cgataccgtc cagcagtcga tgctggccct ggcgcatgcg ctgccgagct ttcgtggcga
      181 atgtcacccc gccggcttcg gctgtcgcat cgcttttaga actgcgtgcc gcgcgcgccg
      241 ccgctggcag cacgatcgcg cgcgccgcga cgagctcgag gacgtgcccg aatccgagct
      301 cgcggagtcg cctggggacc tcgccgaggc cgagcagcgc cgccggatct tgcgcgagct
      361 tttggcgtct ctgcccgaag agcaagcgga gacgctcgcg ttacgcagcg tgatgggctg
      421 gtcgctcgag gaggtcgccc gcgcgacggg cgcgccgctc aacaccgtgc gtagccgcgt
      481 gcgcctggca aaagaggcgc tccgccggcg catcgaagcg aggccggagc tcgccgcgga
      541 agtgagcctc gacccatgag cgtcgtggag cttcaccccg aggagttgat cgacaagctc
      601 gaagcgggca cgctcggcgc cgccgagcgt gttcggctcg acgcgcacct cgccgcgtgc
      661 gacgtgtgcc gtttcgagct cgggctgcgc cgcgacctcg tcgatgacct cggtgccgcc
      721 gggattcctg tgccccgcgc taaagtgccg aggtccgcgc gtccgcagcg cgagtcgagc
      781 atcaggctga aggcgtcctt cctgcgacgc atgcggcgct gggcgacggg gggcggcatc
      841 gctgcggcgc tgttcatctt ggccgcggct tcgttcgctg cttacgcagc gcgtgccgcg
      901 tggtcacaac gcaatgccgc gccgtccacg acgcgaggcc ccgagcgtca cgccgtcctt
      961 gcggcgccgc aggcacagcg caacgcgtcc ggcaccctgc cgagcgtggc gcgcgcctcg
     1021 gccgacgccg tgccggcccc ggtgccgctc gactcgctac cagcgtcgcc gcagccggtc
     1081 ggctcggcgc cggcggcgtt cggtgcgcga gggccgagcg cggcggcgct cttttccgaa
     1141 gcgaacgagg cgcgccgcac cggcgatacg gctcgtgcca tcgaccttta ttggacgctc
     1201 gagcgccgcc atccgacgtc tcaggaaggc atcctttcgc acgtgctcgt ggcgcgcgtg
     1261 ctctcgaatc gcgacccgtc gggtgcgctc gccgagttcg acgcatacct cgcgacaggc
     1321 gcgccgtcgc tcgctgcgga agcgtgggtc ggtcgggctc gggccctcgc ggcgctcggt
     1381 cgcgatgcgg agtcgcacgc cgcgtggcaa caagtgctcg cgcgctatcc cgagtccgtg
     1441 tacgcggacg aggcgcgctc gacgctcgga atacttcgtc cgccgtgagc gcgccgagag
     1501 tcgccttcac ggcgctgttc atcggcgtcg tcgctgccgg gctcgccgct cccgcgcctg
     1561 ccctcgcgct gacccccgtc ccagcgtcgt caccacgccc tatcgtcgag atccacgtgg
     1621 agggcgaccg ggcaacgctc gagcgcgttc gcgtggtggc tagcgagctc ttgggcgaac
     1681 tctcggtcac gcccgtcgtc gccgatgacg ggccgggcgt gccgcccgcg ggcgacgagc
     1741 gtcgcgagtc agcgttcgtg cgggcctact tcgactttcg cgacacgccg acgaccatcg
     1801 tcatcgtcga tggcgcgagc cggcgcgagc tcgatcgccg cagcttgccg ccgaacacga
     1861 cgctcgaagc ggccgtcgaa agcgccgtgc acgtgctctt catgctcgtc gagtcgctgc
     1921 tcgacgagca aacggcgccg ccagccgagg cgccgcgcgc gccggttcat gccgaaccag
     1981 acgcggcgaa cggcgccgtg agccccgagc gcgtcgcgcc cgtcgcaact ccgccgcccg
     2041 ccaccgcgcc tcgagccgca gcgaccgcgg acacgggcgt ctcggacgcg cgcgcacgcg
     2101 ggaagagcga accgagcgtt gggctcgctg caggggtgct cgcccgcgtg ctgcacttcg
     2161 gtgcggggca aatgctcccg agtgccggcg cgcaggtcga gctcagcttc ccgcgcgcgc
     2221 gcccgcgttt cggcgccgct gggtacttcg tggcctcggc gccattcgtg ctgtcgtcac
     2281 gcgacgctac cgcgaagctc tatccgttct cgtccggctt gctgccgaac gtcgagttcg
     2341 agctcggcgc cgatttctct gcggtcgttg gcgggggcgt cgtgctcacg tggttttcat
     2401 tgagcagcgc cggtcccgcg ggggccgcca tcggtcacag cacgggcggc ctggacacgg
     2461 cgctgtcggc gatgctgggc ctgcgcgctc gaacggggcc gcgcttctcg ctgtcgctgg
     2521 tggctgccgt cgactacgac ctcgaaccgc gatcgttcgt ggcgttggac ggccgggaac
     2581 gtcacgtgct cggcacgctc gctcaatggc gaccttcgtt gagcatcgtc gtcgcgtatt
     2641 cgctgttcgg cgggaggacg cgaaccaatg tcgcggaggc ggactgatgc ggacgggacg
     2701 cggcgtgctc atgtgctggt tcgtcgtgac ggcgtgcgcc aacgaggacg tcgtgctgtt
     2761 cgaatttcgg ggcggcggtg ccgctggggc gagcgggatg cagagcgcga gtggcacggg
     2821 cgggacggcc aacggtggca gcgccgcgag caccgacgtt tcgacggcgg gcgccgcgga
     2881 catcgcggca ggggacgtaa ccggtgcgcc gtcaccgccg ccgagctgtc ggagcaacgg
     2941 cgattgtcct tacggctgga gctgcgaaaa gctgaactgc accgacgtga ccggctcctg
     3001 catcgcccgc cccgtctgct ccgaccaaac
//
LOCUS       DATIML010001140         2530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3986908, whole genome shotgun sequence.
ACCESSION   DATIML010001140 DATIML010000000
VERSION     DATIML010001140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3986908"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VLJ38_19645"
     CDS             <1..229
                     /locus_tag="VLJ38_19645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41807.1"
                     /translation="GMPGEDGCSLIRKIRALPPERGGRTPAVALTAYAREEDAQRAFA
                     AGYQLHLAKPVEPAQLANVVANLGGLSVEGD"
     gene            complement(245..715)
                     /locus_tag="VLJ38_19650"
     CDS             complement(245..715)
                     /locus_tag="VLJ38_19650"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41808.1"
                     /translation="MASAAGSPDDSPRSETREATSRDARCLAGVNVLVVEDEPDAREV
                     VGALLEARGARVALTASVAEATESLSRSRPDVIVSDIGMPEVDGLEFARRLRKLSPAR
                     GGNTPIVALTAYTSAQDRRRTLEAGYDYHLGKPVDMDELVRVLERLSKHRSSAS"
     gene            complement(766..1242)
                     /locus_tag="VLJ38_19655"
     CDS             complement(766..1242)
                     /locus_tag="VLJ38_19655"
                     /inference="COORDINATES: protein motif:HMM:NF021082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2383 domain-containing protein"
                     /protein_id="HSU41809.1"
                     /translation="MSYHHPMPSELGTNSEAPNLEVLKDLCKEEIAAARTYEKAQSLP
                     VLARHADVLARCYALHQQRAAELGRRITTLGGEPPNAPGVWGSLMPTLATAAAAMSEK
                     LAVSLLEEAEDRGVRRYRDQLLNLDPANRAFLIERIVPAQDASHAAIGELKQAVSV"
     gene            complement(1239..>2530)
                     /locus_tag="VLJ38_19660"
     CDS             complement(1239..>2530)
                     /locus_tag="VLJ38_19660"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41810.1"
                     /translation="ALAESDPLRDLPRPDTIIGRRFRLGSAIGQGGMSAVFSARDQRL
                     ERDVAFKILTPELACSREIVTRFVNEARTLARLECPHIVRVLDAGVTSEAEMAPLPYM
                     VLELLHGEDLRTQCERGPLDVERALGFVLQTCEGLAAAHAEGVVHRDLKPENLFLCAQ
                     PDGTEVVKILDFGIARSLAAPSSLTLSGEGMGSPGYMSPEQLRDASAADERSDIWSLG
                     VVLYELLAGVPPFQAATPFDLCAHILAGKRDRLERRRPDLPPGLVGVVDRCLEVEPER
                     RYQNVVELASALAPFVAGEAQAVARIRHRLLGRESGELPALPRPLVDVQAPTEPVIHE
                     EEGALPLPIPLSLARSRRRHRVAQALAGLSLIAMLALLSLVLGTASATPSSGEAQSSV
                     VRLSERMSAAAHDFLGTGARTPETGAVPAQGQEGSRR"
BASE COUNT          404 a          888 c          849 g          389 t
ORIGIN      
        1 cggtatgccc ggcgaggacg gctgctcact gatccgcaaa atccgtgcgt taccccccga
       61 acgcggcggg cggacgccgg ccgtcgcgct cacggcctac gcgcgggagg aggacgcgca
      121 gcgagcattc gccgcaggct atcagctgca cctcgcgaag cccgtcgaac cggcccagct
      181 tgccaacgtg gtcgcgaacc tcggcggact gagcgtcgaa ggcgattagc gcccggtccg
      241 ctgctcacga ggcagaggag cggtgtttcg aaagccgctc gaggactcgg acgagctcgt
      301 ccatatcgac cggcttgccc aggtggtaat cgtacccggc ctccaacgta cgacgtcgat
      361 cttgtgcgga cgtgtacgcg gtgagcgcca cgatcggcgt gttgcccccg cgagccggcg
      421 acagcttgcg cagccgccgc gcgaactcga gcccatcgac ctcgggcatg ccgatgtcgc
      481 tcacgatcac gtcgggcctg ctccgcgaaa ggctctcggt ggcttcagcg acggacgccg
      541 tgagcgcaac gcgggctccg cgcgcttcga gcagcgcgcc cacgacttca cgcgcgtcgg
      601 gctcgtcctc gacgacgaga acgttcactc ccgcaagaca gcgcgcgtcg cggctcgtcg
      661 cttcgcgcgt ctcgctgcgc ggcgagtcgt cgggcgaccc cgccgccgat gccaacgaac
      721 tccggaagct cctagcgtga gcctctgcca ccccgatggc catgattata ccgagaccgc
      781 ctgtttgagc tcgccgattg cggcgtggga cgcatcctgc gcgggcacga tgcgctcgat
      841 cagaaaagcc cgattggcgg ggtcgagatt cagcagctgg tcgcggtaac ggcggacgcc
      901 gcgatcttcg gcctcttcga gcagcgagac ggctagtttt tcgctcattg cggctgcggc
      961 cgtcgcgagc gtcggcatga gtgatcccca aactccgggc gcgttcggcg gctccccccc
     1021 gagcgtcgtg atgcgccggc cgagctccgc ggcgcgctgc tgatgcaaag cgtagcagcg
     1081 ggcgagtaca tccgcgtggc gggcgagcac gggcaggctc tgcgcctttt cgtacgtgcg
     1141 cgctgcggcg atttcctctt tgcagagatc cttcaggacc tccaggttcg gcgcttcgct
     1201 gttcgtgccg agctcgctcg gcatcggatg gtgatagctc atcgacgtga tccttcctgc
     1261 ccctgcgccg gaactgcccc cgtttccggt gttcgcgctc cggttcccag aaaatcatgc
     1321 gccgccgcgc tcatgcgttc gctcaatctg acgaccgagc tctgtgcctc gcccgagctc
     1381 ggggtcgcgc tcgccgtccc gagcacgagc gaaagcaacg cgagcatcgc gatcagcgaa
     1441 aggcccgcga gcgcctgtgc gacacggtgg cgccggcgcg aacgcgcgag ggacagcgga
     1501 atcggcagcg gtagcgcgcc ctcctcctca tgaatcaccg gctcggtcgg tgcttgcacg
     1561 tcgacgagcg gccgcggtag cgctggcagc tcaccgctct ctcgcccgag cagacggtgc
     1621 cgaatgcggg ccacggcctg agcctcgccc gcaacgaacg gcgccagcgc ggacgcgagc
     1681 tcgacgacgt tctggtagcg tcgctcgggc tcgacctcca ggcagcggtc gacgacgccg
     1741 acgagtcccg gcggcagatc gggccgccgt cgctcgagtc ggtcgcgctt gcccgcgagg
     1801 atatgggcgc agaggtcgaa cggcgtcgcg gcctggaacg gaggcacgcc ggccaagagc
     1861 tcgtaaagaa cgacgccgag cgaccagata tcactgcgtt catcggcggc gctggcgtca
     1921 cgcagttgct cgggcgacat gtaacccggc gagcccatgc cctccccgct caaggtgagc
     1981 gacgatggcg cagcgagcga acgagcgatg ccgaaatcca agatcttcac gacctcggtg
     2041 ccgtccggct gggcgcacaa gaatagattc tcgggcttca agtcgcggtg aacgacgccc
     2101 tcggcgtgcg ccgcagcgag cccctcgcaa gtctggagca cgaagccgag cgcgcgctcc
     2161 acgtcgagcg gaccgcgctc gcattgcgtc ctgagatcct caccgtgcaa gagctcgagc
     2221 accatgtacg gcagcggcgc catctccgcc tcgctcgtca ccccggcgtc gagcacgcgc
     2281 acgatgtgcg ggcattcgag ccgagccagc gtacgcgcct cgttgacgaa gcgcgtcacg
     2341 atctcgcgcg agcacgcgag ctccggggtc aagatcttga acgccacgtc gcgttcgagc
     2401 cgctgatcgc gagcgctgaa caccgcgctc atgccgccct gaccgatggc gctccccagc
     2461 cggaagcgcc ggccgatgat ggtgtcgggc cgcggcagat cgcgcagcgg atcgctttcg
     2521 gcgagcgcgg
//
LOCUS       DATIML010001141         4064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4281013, whole genome shotgun sequence.
ACCESSION   DATIML010001141 DATIML010000000
VERSION     DATIML010001141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4281013"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="VLJ38_19665"
     CDS             complement(<1..467)
                     /locus_tag="VLJ38_19665"
                     /EC_number="3.1.-.-"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0033890 - ribonuclease D activity
                     [Evidence IEA];
                     GO_process: GO:0042780 - tRNA 3'-end processing [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HSU41811.1"
                     /translation="MHPAHVQSNAALLELLKPLSEASEVCLDCEFQGEGRYHPNLCLV
                     QVAFGTECLAIDPQRVNLALLAPIFESENVRKVLHDGRQDLPLLARAAATVAFHNVFD
                     TQIAAAFAGYGGSVGYGALVSDLCGVELDKSLQVSDWTRELSDQQIEYALDDVR"
     gene            complement(559..1194)
                     /locus_tag="VLJ38_19670"
     CDS             complement(559..1194)
                     /locus_tag="VLJ38_19670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HSU41812.1"
                     /translation="MKTTIPAEEKVRITFRHLEASDALEARVREGVSKLFELFPRITT
                     CHVVIERHPGHRREHQFRCRLDLVVPNAELVAQNSEGGDGSDDAYVALGEVFDEATRR
                     LEDYVRRSRWDVKHHEHTPHARVAKLMVGEGPGTRYGFLETHDGREIYFHEHSVLHGR
                     FDDLEIGTEVRFAEEDGEKGPQASTVVVTHRRSTIATTTASPDEIRDDAES"
     gene            1193..1621
                     /locus_tag="VLJ38_19675"
     CDS             1193..1621
                     /locus_tag="VLJ38_19675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41813.1"
                     /translation="MALGDATFVPGTRAGYKISPSSLRSGGSAPDMHLRTTMATKGEN
                     YRADQQRANQSTKPKRAASKVQSHADKGDVRGTAARNLKTAPSHVKAGPALEDSNTER
                     PSRKSTRGSTGHIKLGTNLQRREIRRVHSPEARAARSAVR"
     gene            1687..2643
                     /locus_tag="VLJ38_19680"
     CDS             1687..2643
                     /locus_tag="VLJ38_19680"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF024801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSU41814.1"
                     /translation="MGKLIRGQWSEEWYACDDQGHFIREDTLFRERVSADGSSRFIAE
                     SGRYHLYVSLACPWAHRTVIARKLKRLEAAISMSVVHPHMGKDGWEFRPFPGSTPDEV
                     NGASFLREIYTRAKPDYTGRVTVPVLWDKREQTIVCNESRMLLRMLGREFDAFGDASV
                     NLCPPQLEAKIDAEIDALYRPVNNGVYRAGFAVKQSAYDAAVTELFQALDGYERRLTT
                     QRYLLGTTLTEADICLFTTLVRFDPVYHYHFKCNLRRLRDYPALYGFLRDVYQTPGVA
                     EVCNFEHIKHHYYTSHPTINPNRIIPAGPLQELASPHDRTSV"
     gene            2735..>4064
                     /locus_tag="VLJ38_19685"
     CDS             2735..>4064
                     /locus_tag="VLJ38_19685"
                     /inference="COORDINATES: protein motif:HMM:NF018866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 family protein"
                     /protein_id="HSU41815.1"
                     /translation="MLESPTDDAVRLATQQWLERAVIGLSLCPFAKGVHAKGLVRYCV
                     SPAETALNLLADLRRELRALAAAPPEVVETTLLVAPRVLGDFLDYNAFLAQADRALVE
                     LGLEGTLQIASFHPDYEFADSAANAVENCTNRSPYPTLHLLREASVSRAVEAFPEAAQ
                     IYEKNVATLRALGHDGFQRVLAEASPPFAGQDPSTSPMERTGFAALPLSPPLQAALAE
                     RGFKELTEIQAQSLPLLLAGRDLVGQSKTGSGKTVAFALPLLDKVELATRELQGLVLC
                     PTRELSAQVARELRKLGSQKQGLVVVVLSGGEPVREQTRALERGAHLAVGTPGRVLDH
                     LGRRTLRVHRVGTVVLDEADRMLDMGFLPDIERLLKALPSGRQTVFFSATFPASIREL
                     SEKHQTNAAWVGVDARAQELPDIAQLVLRGDASKKTELLRWALASHSEEST"
BASE COUNT          721 a         1380 c         1299 g          664 t
ORIGIN      
        1 cgcacgtcgt cgagcgcgta ctcgatttgt tggtcggaaa gctcgcgcgt ccagtcgctc
       61 acttgcagcg acttgtcgag ctcgacgccg cacaagtccg aaacgagcgc gccgtagccg
      121 acgctgccgc catagccggc gaaggcggcg gcgatctggg tgtcgaacac gttgtgaaat
      181 gcgaccgtcg cggccgctcg tgcgaggagc ggtagatctt gccggccgtc gtgcagcacc
      241 tttcgaacgt tttcggattc gaagatcggc gcgagcagcg cgaggttcac tcgctgcgga
      301 tcgatggcca ggcactccgt gccgaacgcg acctgcacta ggcacaggtt cggatggtag
      361 cggccttcac cctgaaactc gcagtcgagg cagacctcgc tcgcctcact gagaggcttc
      421 aggagctcca agagcgcagc gttggattgg acgtgggcgg gatgcacggg cggcggagga
      481 tagagcaagc atggcggacg tgacaccctt cggtttcgta cccctccgcc aaaccagggc
      541 aggcagcacg cacaacggct agctctccgc gtcgtcgcgg atctcgtcgg ggctcgcggt
      601 cgtcgtagcg atcgtcgagc ggcggtgggt cacgacgaca gtgctcgcct gtggcccttt
      661 ctcgccgtct tcctcggcga aacggacttc ggtcccgatt tcgaggtcgt cgaacctgcc
      721 gtgcaggacc gagtgttcgt ggaaatagat ctcgcggccg tcgtgcgtct ccaaaaagcc
      781 gtagcgagtg cccgggcctt cacccaccat cagtttcgcg acgcgcgcat ggggggtgtg
      841 ctcatggtgc ttcacgtccc agcgggagcg gcgaacgtaa tcttcgagcc gccgcgtggc
      901 ttcgtcgaag acctctccga gcgcgacgta cgcgtcgtcg ctaccgtcgc cgccctccga
      961 gttctgcgcc acgagctcgg cgttcggcac cacgaggtcc agccggcaac ggaactggtg
     1021 ctcacgccgg tgtccggggt gccgctcgat cacgacgtgg caggtcgtga tgcgcgggaa
     1081 gagctcgaag agcttgctca cgccctcgcg cacccgggcc tcgagcgcgt cgctcgcttc
     1141 caaatggcga aaagtgatgc ggaccttctc ctccgccgga atcgtagtct tcatggcgct
     1201 cggtgacgca acgttcgtgc ccggaacgcg cgccggatac aagatctccc cgagctcact
     1261 acgatccgga ggctcggcac cggatatgca tctcaggacc acgatggcaa ccaagggtga
     1321 gaactatcgg gccgatcaac agcgtgcgaa tcagtccacc aagcccaagc gcgccgcgag
     1381 caaggtacag agccacgcgg acaaaggcga cgtgcgtggc accgcagctc gcaacctcaa
     1441 aactgcccct tcgcacgtga aggccggacc ggcgctcgaa gactcgaata cggagcggcc
     1501 gtcgcgaaaa tccacgcgcg gcagcaccgg tcatatcaag ctcgggacca acctgcagcg
     1561 gcgcgagata cggcgcgtcc actcaccgga agcccgggca gctcgcagcg ccgtccgctg
     1621 agctccgccg tccgcaggcg ttatccgtcg tggccgcgcg gagcgatagg gcgcaagctc
     1681 ggtgacatgg gcaagctgat ccgcggccaa tggagcgagg agtggtacgc gtgcgacgac
     1741 cagggccact tcatccgcga ggacacgttg ttccgcgagc gggtgtccgc tgacggctcg
     1801 tcacgtttca tcgccgaatc cgggcgctac cacctgtacg tcagtctggc gtgcccgtgg
     1861 gcacaccgca cggtcatcgc gcgcaaactc aagcgcctgg aagcggccat ttcgatgagc
     1921 gtcgtgcacc cgcacatggg caaggacggc tgggagttcc gaccctttcc cggatcgaca
     1981 cccgatgagg tcaacggcgc gagcttcctg cgcgagatct acaccagggc caagccagat
     2041 tacaccgggc gagtcaccgt gcccgtgctg tgggacaagc gcgagcagac catcgtttgc
     2101 aacgagtccc gcatgctgct gcgcatgctc ggccgcgagt tcgacgcctt cggcgacgcc
     2161 agcgtcaacc tctgcccgcc gcagttggag gcgaagatcg acgccgagat cgacgcgctg
     2221 taccggcccg tgaacaacgg cgtctaccgc gctggcttcg ccgtgaagca gagcgcgtac
     2281 gacgctgccg tcaccgagct attccaagcg ctggacggct acgaacggag gctcacgacc
     2341 cagcgctacc tgctcggcac cacgctcacc gaagcggaca tttgcctctt cacgacgctc
     2401 gtccgcttcg accccgttta ccactaccac ttcaagtgca acctgaggcg tctccgggac
     2461 tacccggcgc tgtacggctt tctgcgcgat gtgtaccaga cgcccggcgt ggccgaggtc
     2521 tgcaacttcg agcacatcaa gcaccactat tacacgagcc accccaccat caatccgaac
     2581 cggattatcc ccgcggggcc gttacaagag ctcgcgtcgc cgcacgatcg aacgtccgta
     2641 tagcgcgagc aaaacccgcg gcgttgtcgg gccatgagcg ctaccgggcc tgcgcggagc
     2701 tggcgcccgg gcggcgcagc gcgtaaagcg gtgcgtgctc gagtcaccca ccgacgacgc
     2761 agtccgcttg gccacgcagc agtggctcga gcgcgccgtg atcggcctct cgctctgccc
     2821 cttcgccaag ggcgtccacg cgaaaggtct cgtgcgttac tgcgtcagcc cggcagaaac
     2881 ggcgctcaac ctgctcgcgg atttgcgccg ggagctccgc gcgctggccg cggctccgcc
     2941 ggaagtcgtc gaaacgacgc tgctcgtcgc gccgcgcgtg ctcggagatt ttctcgacta
     3001 caacgcgttc ctcgcgcagg ccgatcgagc cctcgtggag ctcggactcg agggcaccct
     3061 tcagatcgcg agttttcacc ccgactacga atttgccgac agcgcggcga atgccgtcga
     3121 aaattgcacg aatcgctcgc cgtacccgac gttgcacctg ctgcgcgagg ccagcgtgag
     3181 ccgcgccgtc gaggcatttc ccgaagcggc gcagatttac gaaaagaacg tcgccacctt
     3241 gcgcgcgctc ggtcatgacg gctttcaacg cgtgctcgcg gaagcttcgc cgccgttcgc
     3301 cggccaggac ccctcgacat cgcccatgga acgcactggt ttcgctgccc tgccattgtc
     3361 cccgccgctc caagccgcac tcgcggagcg gggattcaag gaactgaccg agatccaagc
     3421 gcaaagcttg ccgctcctct tggcaggtcg cgatctggtg ggacagtcca agaccggcag
     3481 cggcaagacc gtcgccttcg cgctgccgct gctcgacaag gtcgagctcg cgacgcgaga
     3541 gctccagggt ctcgtgctct gtccgacgcg cgagctcagc gctcaggtcg cgcgcgagct
     3601 cagaaagcta ggctctcaaa aacaggggct cgtcgtcgtc gtgctttcgg ggggcgaacc
     3661 cgtgcgcgag cagacgcgcg cgctcgagcg gggggcgcat cttgcggtgg gaacgcccgg
     3721 ccgcgtgctc gatcacctcg gtcgccggac gctgagggtt caccgcgtgg ggaccgtcgt
     3781 gctcgacgag gccgatcgca tgctcgatat gggctttctg cccgacatcg agcggctgtt
     3841 gaaggcactg ccgagcgggc gccagaccgt ctttttctcg gccacgtttc cggcgtccat
     3901 ccgcgagctc agcgaaaaac accagacgaa cgccgcctgg gtgggggtgg acgcacgggc
     3961 gcaggagctg cccgacatcg cccaactcgt gctgcggggc gatgcgtcca aaaaaaccga
     4021 actcttgcgc tgggcgctcg cgagccactc cgaagagtcc accc
//
LOCUS       DATIML010001142         9302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_817741, whole genome shotgun sequence.
ACCESSION   DATIML010001142 DATIML010000000
VERSION     DATIML010001142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 9302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9302
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817741"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VLJ38_19690"
     CDS             <1..374
                     /locus_tag="VLJ38_19690"
                     /inference="COORDINATES: protein motif:HMM:NF024770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSU41816.1"
                     /translation="VFLRYHVDSGVDYARRWLKLARARAPTAVVFGNDAMALGFMRTV
                     QSQGVRIPDEVSVVGFDDIPSASLVWPGLTTVRQEMSKIGETACQLVRRALERKSVGG
                     SVHQFPVSLVVRESTGRVPNE"
     gene            complement(426..821)
                     /locus_tag="VLJ38_19695"
     CDS             complement(426..821)
                     /locus_tag="VLJ38_19695"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HSU41817.1"
                     /translation="MALAAALILGELGWQFAVGDVRNARVDMLLPLTRVERAVWCAVA
                     LSAAFSEEVVYRGYLARELTRLSARPAVGVLGQAVLFGLAHGEQGSGTMLRFFVYAVG
                     LALVAAARRSLVPCIIGHASVDLLAGFAQ"
     gene            1194..1322
                     /locus_tag="VLJ38_19700"
     CDS             1194..1322
                     /locus_tag="VLJ38_19700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41818.1"
                     /translation="MLMLSLATVPVLAAGWSLLYLLFGGGIGGAILIFVVLKMIGH"
     gene            1614..2831
                     /locus_tag="VLJ38_19705"
     CDS             1614..2831
                     /locus_tag="VLJ38_19705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41819.1"
                     /translation="MTGDGHVWLRIAHQPLFSESFWLASRPFTLPLAYKLVGGSDEAL
                     LWLHGCFAVLSWVALAFAAAAFMETKLLAAIAFALVLGLGLSTPAVCWDVIVRSESIG
                     LSAFLLCLAAVTFLAQNNELPERMGVAWAILAVIAALLTAFARETNAYLLPLLGVCSF
                     WAVWAGAEARRLLRSGALALALVAVFLSCQANTRASGRYAFPLMNVIFERVLPNSRKL
                     AYFRDALSMPVSRALLERRSHAASAEHRTAFHAPELAEFRAWVRERGYSAYQSYLLTH
                     ARTTFGEANHYFPTYARADFTRRGRAASVLDEVIVGGPTAAYPRLVLAITGVLGLLAS
                     FSRARHVRVLGVLSVFCVLATITQTFICYHGDAMETLRHGMMVGTMLRLSAVFAVLLG
                     LAVAARSRGVRRA"
     gene            complement(2850..5420)
                     /locus_tag="VLJ38_19710"
     CDS             complement(2850..5420)
                     /locus_tag="VLJ38_19710"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU41820.1"
                     /translation="MNAADKFIGKTLPGGHHILDLISVGGMGRVYRAQQSALGRTVAV
                     KIIHPHLLSDENSALRFMTEARAASQLNHPNSVSVFDFGRTDDGQPYLVMEFLRGKDL
                     ARVAYEEGPLPFARVVDVLRQVLAALGEAHDLGIVHRDLKPENVILEPLRRGGDFVKV
                     VDFGLAKLRADTQSPSVTSPGIVCGTPDYMAPEQGRGDAIDGRSDLYSVGVILFQLLT
                     GRLPFEADSPTQVVMMHLTIPVPDPRQVAPERVIPEPLVAVVFRAMAKDARDRYADAS
                     EFAEGLRQALAIIESSPPPSTGWENRLSVPPAGAVSCPACGLVVAFTKFCGECGARLA
                     LRSGAPDTNAGIFPLPLVGRDDDLAWLEDRRESAKGRLVAARLVGEPGSGKTRLLQEI
                     ARFGEMDGDLVVQAGPDTHLAEVPHHALRQLFVALTGRTTEELSRSSAGGAPTAALQG
                     LADAFMDSPRGDSRNPAERRRARADSLRWALDVATQRAASGRVILCVDEIHRIDSLSA
                     TALTDLVNAPPRGASVLVLGTHIPAFDPGWGSDVGARIIGGLPFGAVLGMLRSHPSGE
                     RVRIDESARGFLPLYVEQVLRYSLEGGSDPPTRLADLVALRVDTLAPNARRILQLLAV
                     VGDRTQKLVLANLLPSADGLEQTLEELVRAGMVDHDKASNYSCSHPLIRDIALAGIPA
                     AVRRELHHRVLGAADSLRTPLEARAQHAYYAHDSFQALLLLEQVADRASLRGDPETEV
                     LALRRGLEMAREEISRGELDDPLRAVLIFSRKLGAALARLGNYADAEGVLREALDLTG
                     PSGADRARVLSSLAVVAHGRQRSKEAVGYIDQAIELAHRLGDKDLARTFSDTRKQWVA
                     "
     gene            5683..6753
                     /locus_tag="VLJ38_19715"
     CDS             5683..6753
                     /locus_tag="VLJ38_19715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41821.1"
                     /translation="MSGRVRLGDLLVSAHIITRDKVEAVLTAQQGDGRRLGKLLVERG
                     LVTETQLTQILSQQLSVPWVSLYHIDFSRQLLDLVPEELAEQHCLIPIFVRRVRGYGE
                     TLYIAMDDPTNEAAVVAVAEFSGLPVRTMIAPPSDIRSAIRAYYPSGSEQGEMLTEDD
                     VAHAASIAPGAPVRRAASVKPVPPEPAAEPLPRDARTPTFGVPAVSITPDPPSAELST
                     LPPGDVGSIEPPPDSSPTIEAREISMPAPARRPGRRMVTLTLLDGTRVNLPARTSRPP
                     KETEREAIPRPQRRDPDESGGALTARDLVAALRAVTHGADASEILGDQARWEPLFAAL
                     LALLLKKHLIADWEFVEEFRKI"
     gene            complement(6767..8251)
                     /locus_tag="VLJ38_19720"
     CDS             complement(6767..8251)
                     /locus_tag="VLJ38_19720"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HSU41822.1"
                     /translation="MFRKVLIANRGEIAVRVSRTLRELGVGSVAVYTEPDRGALHVQR
                     ADEAVALGADPRAYLDAERLIDAARRTGCDALHPGYGFLSENAEFAELCAARGVAFVG
                     PPPSAIRAMGSKQRARAAMAAAGVPIVPGGSAGTLDEAKATAAAVGYPVMVKATDGGG
                     GKGMRLCERESELASALERTRSEAEKAFGNGDVYIEKALLEPRHVEVQVLGDREGRLV
                     HLFERDCSLQRRHQKIVEETPCPVLDPATREALCAVAVQGASSLGYYSAGTFEFLLDR
                     GGSFYFLEMNTRLQVEHPVTELVTGTDLVREMLCIAAGERLTLEPVARGVAIEARICA
                     EDPGRGFVPSPGVIEQLVAAAGPGVRDDSGVFAGATVSPNYDPLLAKLSVWAPDRPQA
                     LARLRRALGEYVVVGIQTNLAFLERLVATSEVAAGRYDTGFVERRAAELTQRAACPDE
                     DALFAAAAVAASLEHGRTARNGESRGEDALSPWVAAERAARLGR"
     gene            8366..>9302
                     /gene="xseA"
                     /locus_tag="VLJ38_19725"
     CDS             8366..>9302
                     /gene="xseA"
                     /locus_tag="VLJ38_19725"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HSU41823.1"
                     /translation="MVMLFTRAVSGAEVVTVAELDRRLRRAVESASGSYWVEGEVTSL
                     KLAASGHAYFCLKDEREDAVIDCVMYRFDAQRAKKHLVEGARLQLWGRATVWAPRGRM
                     QLVGNFARTAGKGALLEALEALKQRLLAEGLFAPERKRALPGDPRVVGVVTSAHGAAF
                     HDIRSVAFRRGGVRLVLAPAQVQGDAAPESIVQALDLLERYPGLDVAIVGRGGGSGED
                     LQAFNDERVVRRVARFRVPVVSAVGHEIDVTLTDLAADVRAATPSQAAELVVPDGRVR
                     HDALARQRLALLRAQRSRLELARANLSHLRASLGDP"
BASE COUNT         1358 a         3197 c         3259 g         1488 t
ORIGIN      
        1 tcgtattttt gcgctaccac gtcgattccg gcgtcgatta cgcgcgccgc tggctcaagc
       61 tcgcgcgcgc gcgagccccc acggcagtcg tcttcggcaa cgacgccatg gcgctcggct
      121 tcatgcgcac cgtgcaatcg caaggtgtcc gcatcccgga cgaagtgtcc gtcgtgggct
      181 tcgacgatat cccctcggcg agcctcgtgt ggccgggact cacgaccgtg cgccaggaaa
      241 tgagcaaaat cggggaaacg gcgtgccagc tcgtgcggcg cgcgctcgag cgcaagtcgg
      301 tcggcggcag cgtgcatcag ttcccggtgt cgctcgtcgt gcgcgagagc acggggcgcg
      361 tgccgaacga gtgaccgcga ggcgaaagcc gagcgcggat ccctgtgaac gcagcgagct
      421 tcccgtcact gcgcgaagcc cgcgagcaga tcgacgctcg cgtggccgat gatgcagggg
      481 acgagacttc gacgcgcggc ggcgacgagc gcgagcccga cggcgtagac gaagaagcgc
      541 agcattgtgc cgctgccctg ctcgccgtgc gcgagcccga agagtacggc ttggccgaga
      601 acacccaccg cggggcgtgc cgacagccga gtgagctcgc gtgcgaggta gccgcggtag
      661 acgacctctt ccgaaaacgc ggcgctgagc gcgaccgcgc accacacggc gcgctcgacg
      721 cgcgtcagcg gtaagagcat gtcgacccgt gcattccgca cgtcgccgac ggcgaactgc
      781 cagccgagtt cgcccaaaat gagcgcggcc gccagcgcca accccaaaag aacatcccac
      841 gacgcccgtc gcgccgagta gccggccgtg cccagcaggt ctcgcagcgc cgagcgggat
      901 cggccaaccc gacacacgta gagaaaaagg ccccaactga cggccagcat cggcacgtag
      961 gcttgcgcga tacgcgagcc gctcggggtc gccgaaattg cgccatgttc tcgtaaaaac
     1021 aagcccgtga cagcgacagc gagcaagagc ccaacgagca ggagcgggtg ccacgcgggc
     1081 aacggcgccg cccgtcgcgc gtccaactcg cattcactct gcacttggca agctccttgc
     1141 tttgggtcca agcaacgcgc gggccagagc ccgcgccgca gttggagaat cacatgctga
     1201 tgctttcact cgctaccgtt ccggtactcg cggcaggctg gtcgctgctt tatctgctgt
     1261 tcggcggcgg catcggtggc gccatcttga ttttcgtcgt gctcaagatg atcggtcact
     1321 gagcggggac ccgcggcgct gcggcgttgc gcagcttgcc gggagctgta tcctgagcgg
     1381 gtagcgccgc tgccgggcgc ggtcgaaagc atgaactccg cgcgggatct gcccttgagc
     1441 ttggccgagt tttgagccag ccagcaggta cggctcgttt cgctcgattc gggcgctccg
     1501 gacgggagct tctgcgtggc tgccggtccg cccgcctgct cgtcttcgag tgtctggccg
     1561 tcgctctctt tggcgcgatt cgtctggctg cagtcgcgaa cagcgagccc ctcgtgaccg
     1621 gcgatggcca tgtttggctg aggatcgcgc accagccgct cttttcggaa tcgttctggc
     1681 ttgcctcgcg gcccttcacc ttgccgctcg cgtacaagct cgtcggcggc tcggacgagg
     1741 cgttactctg gctgcatggt tgctttgccg tcctgagctg ggtagcgctg gcgttcgcgg
     1801 ccgcagcgtt catggagacc aagcttctgg ctgcgatcgc gttcgctctc gtgcttggcc
     1861 tgggactgag cacgccggcc gtctgctggg atgtgatcgt gagatcggag tccatcggcc
     1921 tgtccgcgtt cctgctctgc ctggccgcgg tcacgttcct ggcgcagaac aacgagttgc
     1981 ccgagcgcat gggcgttgct tgggcgatac tcgcggtcat tgccgcgctc ttgacggcgt
     2041 ttgcccgcga aacgaacgct tatctactgc cgctgctcgg cgtctgttcg ttttgggcgg
     2101 tctgggcggg cgcagaagcg cgccgactgc tgcgttcggg cgcgctcgca ctcgcgctcg
     2161 tcgctgtctt cctgtcttgc caggccaaca cacgtgcgag cgggcgctac gcgttcccgc
     2221 tcatgaacgt catcttcgag cgcgtgttgc cgaactcgcg caagctcgcc tattttcgtg
     2281 acgctttgag catgcccgta tcccgggcgt tgctcgagcg tcgctcgcac gcggcgtccg
     2341 ccgagcatcg gacggccttt cacgcgcccg aactggctga gttcagggcc tgggttcgcg
     2401 aacgcggtta ctcggcgtac cagagctacc tgctcacgca cgctcgcacg acgttcggcg
     2461 aggcgaacca ctactttccg acgtatgcgc gcgccgattt cacgcgccgc ggtcgcgccg
     2521 cgtcggttct cgacgaggtc atcgttggcg ggcccacggc tgcctacccg cgtctcgtgc
     2581 tcgcgatcac gggagtcctc ggtctgctcg ctagctttag ccgggcgcgc cacgtgcgtg
     2641 tactcggcgt gttgagtgtc ttctgcgtgc ttgcgacgat cacgcagacg ttcatttgct
     2701 atcacggaga cgcgatggaa acgctgcgcc acggcatgat ggtcggtacg atgctgcggc
     2761 tgagcgcagt cttcgccgtg ctgctcggtt tggccgttgc ggctcgttcg cgcggcgtgc
     2821 ggcgcgcgtg acgccccggc aggtcggccc tacgcgaccc actgcttgcg cgtgtcgctg
     2881 aaggtgcgcg cgagatcttt gtcgccgaga cggtgggcga gctcgatggc ttggtcgatg
     2941 tagccgaccg cttctttcga gcgctggcgt ccgtgcgcga cgacggccag ggagctcaag
     3001 acgcgggcgc ggtcggcgcc gctcgggccg gtgaggtcga gggcttcgcg caagacgcct
     3061 tcggcgtcgg cgtagttgcc gaggcgcgcg agggctgcgc cgagtttgcg gctgaagatg
     3121 aggacggcgc gcagtggatc gtcgagctcg ccgcgcgaga tttcttcgcg cgccatctct
     3181 aagccgcggc gcaaggcgag cacttcggtc tcgggatcgc cgcgcagcga ggcgcgatcg
     3241 gcgacctgtt cgagcaggag cagcgcttgg aaggagtcgt gcgcgtagta ggcgtgctgc
     3301 gcccgcgctt cgagcggggt gcgcagcgag tcggcggcgc cgagcacgcg atggtggagc
     3361 tcgcgccgca cggccgccgg aataccggcg agcgcaatgt cgcgaatcag cgggtgtgaa
     3421 caggagtagt tcgacgcctt gtcgtggtcg accatgccgg cgcgcacgag ctcctcgagc
     3481 gtctgctcga gtccgtcggc gctcgggagc aggttcgcga gcacgagctt ttgcgtgcgg
     3541 tcacccacga cggcgaggag ctgcaggatg cggcgcgcgt tcggcgcgag cgtgtcgacc
     3601 cgcagggcga ccagatcggc gaggcgcgtc ggcggatcgc tgccgccctc gagcgaatag
     3661 cgcagcacct gctccacgta gagcggcaga aagccgcgcg cgctctcgtc gatgcgcacg
     3721 cgctcgcccg acgggtgcga gcgcaacatg cccagcacgg cgccgaacgg cagcccgccg
     3781 atgatgcgcg cccccacgtc cgagccccac ccgggatcga aagccgggat gtgcgtcccg
     3841 agcacgagca cggaggcgcc ccgcggcggc gcgttcacga ggtccgtcag cgccgtcgcg
     3901 ctgagcgagt cgatgcggtg gatctcgtcg acgcagagaa tcacgcgccc cgaggccgcg
     3961 cgctgcgtcg ccacgtcgag cgcccagcgc agcgaatcgg cgcgcgcgcg gcggcgttcg
     4021 gccgggttgc ggctgtcgcc gcgcggcgag tccatgaacg cgtcggcgag gccctggagc
     4081 gccgccgtgg gcgcgccgcc cgcgctgctg cgcgaaagtt cctccgtggt cctgcccgtg
     4141 agcgccacga acagctgccg gagcgcgtgg tgcggcacct cggcgaggtg cgtgtcgggc
     4201 cccgcctgca cgacgaggtc gccgtccatt tcgccgaagc gcgcgatctc ctggagcagg
     4261 cgcgtcttgc ccgagcccgg ctcgccgacg agccgggccg cgacgagccg ccccttcgcg
     4321 ctctcgcgcc gatcttcgag ccaagcgaga tcgtcgtcgc ggccgacgag cggtagcggg
     4381 aagatgcccg cgttcgtgtc gggcgcgcca ctgcggagcg cgaggcgcgc gccgcactcg
     4441 ccgcagaact tcgtgaacgc cacgacgagc ccgcacgccg ggcagctcac cgcgcccgcg
     4501 ggcggcaccg acagccggtt ctcccagccg gtggacggcg gcggcgagct ctcgatgatg
     4561 gcgagtgcct ggcgtaagcc ctcggcgaac tcactcgcgt cggcgtagcg gtcccgcgcg
     4621 tccttggcca tcgcgcgaaa cacgacggcg acgagcggct cggggatcac gcgctcgggc
     4681 gcgacctggc gcggatccgg caccgggatc gtcaggtgca tcatgacgac ctgcgtcggc
     4741 gaatcggcct cgaacggcag ccgccccgtg agcagctgaa acagaatcac cccgacggaa
     4801 tagaggtcgc tgcgcccgtc gatcgcgtcg ccgcggccct gctcgggcgc catgtagtcg
     4861 ggcgtgccgc agacgatgcc ggggctcgtg accgacggcg actgcgtgtc ggcgcggagc
     4921 ttggcgagcc cgaagtccac gaccttgacg aagtcgccgc cgcgccggag cggttcgagg
     4981 atcacgttct cgggcttgag atcgcgatgc acgattccga ggtcgtgcgc ttccccgagc
     5041 gcggcgagca cttggcgcag cacgtccacg acgcgcgcga acggcagcgg cccctcctcg
     5101 tacgcaacgc gcgcgagatc cttgccgcgc aagaattcca tcacgaggta cggctgaccg
     5161 tcgtcggtgc ggccgaaatc gaagaccgag acggagttcg gatggttcag ctggctcgcg
     5221 gcgcgcgcct cggtcatgaa ccgcagcgcg gagttctcgt ccgagagcaa gtgcgggtgg
     5281 atgatcttga ccgcgacggt ccgaccgagc gcgctctgct gcgcgcggta gacgcggccc
     5341 ataccgccga cgctgatgag gtcgaggata tgatggccgc ccggcagcgt cttgccgatg
     5401 aacttgtcgg cggcgttcat ccccatcgtg ccgacgggga agccgcaagt cgggcagtac
     5461 tggtgctcag tggcgcagtt ggacccgcag tgggggcaga tcctggagac cgactgttgg
     5521 ctcgtcacga cccggggttc gagaaaggtt attctatccc gcgcccgccg gcacgactct
     5581 cgcgagggcg acgctttggg gccgaaacat cacccaaagc agtcaaaaga ctcgagttcc
     5641 ggtcctcggg cgggacaaaa tgctgtagct tgctcgttca gcatgtccgg ccgcgtccgc
     5701 ttgggggacc ttttggtcag cgcgcacatc atcacgcgcg acaaggtcga ggccgtgctc
     5761 accgctcagc agggtgacgg acgccggctc ggcaagctgc tcgtcgagcg cgggctcgtc
     5821 accgagacgc agctgactca aattttgagc cagcagctca gcgtcccgtg ggtgtcgctc
     5881 taccacatcg atttttcacg ccagctgctc gacctcgtcc cggaagagct cgccgagcag
     5941 cactgcttga tcccgatctt cgtgcgacgc gtgcgcggct acggggagac tttgtacatc
     6001 gcgatggacg atccgacgaa cgaagcggca gtcgtcgcgg tcgccgagtt ctcgggcctg
     6061 ccggtgcgca cgatgatcgc gccgccctcc gacattcgct cggccattcg cgcgtactac
     6121 ccctcgggct ccgagcaagg ggaaatgctg acggaggacg acgtggcgca cgcggcgtcg
     6181 atcgcgccgg gcgcgcccgt gcggcgtgct gcctccgtca agccggttcc ccccgagccc
     6241 gccgccgaac cgctgccgcg cgacgcgcgc acgccgacct tcggcgtgcc cgccgtcagc
     6301 atcacgcccg atccaccgag cgccgagctc tcgacgttgc cccccggcga cgtgggctcg
     6361 atcgagccac cgcccgatag ctcgcccacg atcgaagcgc gcgaaatctc gatgcccgcg
     6421 cccgcgcgcc ggccgggccg tcgcatggtg acgctcacct tgctcgacgg aacccgcgtg
     6481 aatctccccg cgcggacctc gcgcccgccg aaggagaccg agcgcgaagc catcccgcgc
     6541 ccccagcgcc gcgatcccga cgaaagcggc ggcgcgctca cggcgcgcga tctcgtcgcg
     6601 gcgctccggg ccgtgacgca cggcgccgac gcgagcgaaa tcctcggcga ccaggcgcgc
     6661 tgggagccgc tcttcgccgc gctgctcgcc ctgctcttga agaagcacct catcgccgac
     6721 tgggagttcg tcgaggagtt tcggaagatc tgacgctgcg gcgcgctcag cgtccgagcc
     6781 gcgcggcgcg ttcggctgcg acccagggcg acaaagcgtc ctcgccccgt gactcgccgt
     6841 tgcgagccgt gcgcccgtgc tcgagcgagg ccgccacggc ggcagccgcg aagagcgcgt
     6901 cttcgtccgg gcacgcagct ctctgcgtga gctcggcggc gcgccgttcg acgaaccccg
     6961 tatcgtagcg gcccgcggcg acttcggacg tcgcgacgag gcgctcgagg aacgcgaggt
     7021 tcgtctggat gccgacgacg acgtattcgc cgagtgcgcg cctgagccgc gcgagcgctt
     7081 ggggccgatc gggcgcccag accgagagct tggcgagcag cgggtcgtag ttcggactga
     7141 cggtcgcgcc tgcgaagacg ccgctgtcgt cgcggacgcc cggtcccgcc gcggccacga
     7201 gctgctcgat cacgcccggg ctcggaacga agccgcgccc cggatcttcg gcgcaaatgc
     7261 gcgcttcgat ggcgacgccg cgcgcgacgg gttcgagcgt gagtcgctcg cctgcggcga
     7321 tgcacagcat ttcacgcacg aggtctgtcc ccgtgacgag ctcggtcacg gggtgctcga
     7381 cctgcaagcg cgtgttcatc tcgaggaaat agaagctccc gccgcgatcg agcaaaaact
     7441 cgaaggtgcc ggccgagtag tagccgagcg agcttgcgcc ctgcacggcc acggcacaga
     7501 gcgcttcgcg cgtcgccggg tcgagcacgg ggcacggcgt ttcctcgacg attttctgat
     7561 ggcggcgctg cagcgaacag tcgcgctcga acaggtgcac gaggcgccct tcgcgatcac
     7621 cgagcacttg cacctcgacg tggcgcggct cgaggagcgc cttctcgatg tacacgtcgc
     7681 cgttgccgaa cgccttttcg gcttcgctcc gcgtgcgttc gagcgcgctc gcgagctcgc
     7741 tttcgcgttc gcacagacgc atgcctttgc cgccgccccc gtccgtcgcc ttgaccatga
     7801 cggggtaacc gacggcggct gccgtcgctt tggcttcgtc gagcgtgccc gcgctcccgc
     7861 ccggtacgat gggaacgcca gcggcggcca tggccgcgcg cgctcgctgc ttcgagccca
     7921 tcgcacggat cgcgctcggc ggcgggccga cgaacgcgac gccgcgcgcc gcgcagagct
     7981 cggcgaactc ggcattttcg gagaggaagc cgtagcccgg gtgcagcgcg tcgcagccgg
     8041 ttcgccgtgc ggcgtcgatg agccgttcgg cgtcgaggta ggctcgcggg tcggcgccga
     8101 gcgcgaccgc ttcatcggcg cgttgcacgt gcagggcgcc ccgatcgggc tccgtgtaga
     8161 cggcgacgct gccgacgccg agctcgcgca gcgtgcggct gacgcgcacc gcaatttcgc
     8221 cgcggttggc gatcagcacc ttccggaaca tgggagccgc aggctagtac gctcggccgc
     8281 gtggtgcagg catcaatatc cttttaatct cggacggtta gctccgggac gccgaatcgg
     8341 acggaaccgt gacgcgggat ccgcaatggt catgctattc acgcgcgccg tgagcggggc
     8401 cgaagtcgtt accgttgcgg aactcgaccg ccgcttgcgc cgagccgtgg agtcggcttc
     8461 gggcagttat tgggtcgagg gcgaggtcac ctcgctcaag ctcgcggcga gcgggcacgc
     8521 gtacttctgt ttgaaggacg agcgcgagga cgccgtcatc gattgcgtga tgtatcgctt
     8581 cgacgcgcag cgagcgaaga agcatttggt ggagggcgcg cgccttcagc tctggggtcg
     8641 cgcgacggtc tgggcgccac gcggccgcat gcagctcgtc ggcaacttcg cccgcacggc
     8701 cggcaagggc gcgctgctcg aagcgctcga agcgctgaag caacgcctgc tcgccgaggg
     8761 gctcttcgcg cccgagcgca aacgcgcgct accgggcgat ccgcgcgtgg tcggcgtggt
     8821 gacgagcgct cacggcgccg cgtttcacga catccgcagc gtcgcgtttc ggcgcggagg
     8881 cgtgcggctc gtgctcgcgc ccgcgcaagt gcaaggcgac gccgcgcccg agagcatcgt
     8941 gcaggcgctc gatttgctcg agcgttaccc cgggctcgac gtggcgatcg tggggcgcgg
     9001 cggcggctcg ggcgaggatt tgcaggcgtt caacgacgag cgcgtcgtgc ggcgcgtggc
     9061 gcgctttcgc gtgccggtcg tgagcgccgt cggtcacgaa atcgacgtga cgctcaccga
     9121 tctcgccgcc gacgtccgag cggcgacgcc gtcacaagcg gccgagctcg tcgtgcccga
     9181 cggccgcgtg cggcacgacg ccctcgcgcg ccagcggctc gccttgttgc gcgcccagcg
     9241 ctcgcggctc gagctagccc gcgcgaacct gtcgcacctg cgcgcctcgc tcggcgatcc
     9301 gc
//
LOCUS       DATIML010001143         4901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_527797, whole genome shotgun sequence.
ACCESSION   DATIML010001143 DATIML010000000
VERSION     DATIML010001143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527797"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1336)
                     /locus_tag="VLJ38_19730"
     CDS             complement(<1..1336)
                     /locus_tag="VLJ38_19730"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSU41824.1"
                     /translation="MVTCAEPAAGSGCSVTGEGPNVVFRGDVLTPGVVYENGAVRIEG
                     GVIRCVGCACDTAAATLVSCADAVIAPGLVNSHDHVAYDAEGPRPLGSERYDHRHDWR
                     LGLRGHAALSYAGGASEVERATQELRMLLGGVTTLAGGAGVHGLVRNADMGDFGEGLP
                     TAPADSDTFPLDDAGGLLLASGCAYGKAHATEDSVERAGAFLAHLGEGVDANAENELV
                     CAMTPDFGLVQPTSGVVHAVATNATIAAGLAARSALVVWSPRSNVALYGNTAPVPLLL
                     RSGVEVALGTDWLLTGSMNLLRELACAKTWSDVYFDHALDDHALFMLATTAGARAVGA
                     GDAIGRLAPGMLADVNIVDRHGREPYAALISAGPADLLLVSRGGQPLYGRADLLALLG
                     ASGCDELDVCGASQRVCTADSGFSFAELAASAEATYPLFACDTPPNEPTCVPA"
     gene            complement(1853..2233)
                     /locus_tag="VLJ38_19735"
     CDS             complement(1853..2233)
                     /locus_tag="VLJ38_19735"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HSU41825.1"
                     /translation="MRVLLDTRALLWAVARVNELPSRVRALLEDGANDAYVSAASTWE
                     IALETRLGKLELDLDELMSELRALGFNELRVSFEHTRRAGKLPALHDDAFARLLVAQA
                     LEEGLTLVTADSTLSAYSVPTFWE"
     gene            complement(2230..2466)
                     /locus_tag="VLJ38_19740"
     CDS             complement(2230..2466)
                     /locus_tag="VLJ38_19740"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HSU41826.1"
                     /translation="MEVNIYAAKTQLSSLVRRAAAGEEIVITRNGEPVARLLPIGQPG
                     KKRKLGRLRDKIRMPGEPPPKSTDDLVAAFAGGA"
     gene            2553..3005
                     /locus_tag="VLJ38_19745"
     CDS             2553..3005
                     /locus_tag="VLJ38_19745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41827.1"
                     /translation="MVGRQLARVSCFLLLVSCGRLDRECRGVSVTANAFIAESERQRP
                     RPNATTEETMKAELATAARYDKLASDLKALKVESGELSPEVERYRTLAEHSAESLRAV
                     AAAFGRGDFETARAKRVELDREARGEGPLVQKINEICGTTKPAADASL"
     gene            complement(3030..>4901)
                     /gene="uvrB"
                     /locus_tag="VLJ38_19750"
     CDS             complement(3030..>4901)
                     /gene="uvrB"
                     /locus_tag="VLJ38_19750"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HSU41828.1"
                     /translation="FVSYYDYYQPEAYIPTTDTFIEKDAIINDQIDRMRHAATHALLS
                     REDVIIVASVSCIYGIGSAETYSGLLIEIVKGEEMRRDELLRRLVDIQYERNDTDFHR
                     GTFRVRGDVVEIFPAYEEARAIRVEFFGDEVDSIREVDPLRGRVLGQLEKYAVYPGSH
                     YVTPRQQLARSIAGIREELRERLEFYDKAGRFLEKQRLQQRTSYDLEMLDQMGFVQGI
                     ENYSRHLSGRAPGEPPPTLIDYFPEDFLLVIDESHQTVPQIGAMYRGDRSRKETLVEY
                     GFRLPSALDNRPLQFVEFEKHMRHVIFVSATPGDFELEKVQGEVVQQLIRPTGLIDPE
                     IILRKVAGQVDELLTEIRKRVEKQERVLVTTLTKRMAEDLTEYYAELGVRVRYLHSDI
                     DTLERVEILRDLRAGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSPRSLIQT
                     IGRAARNANGQVIMFADRITDAMRQAMDETDRRRTLQRAYNLEHGITPETIKRAIFDM
                     NPASGTTDYYAVPKRSAGGTPADTSPTAEQDRAERIQALRQEMFAAAENLQFETAARL
                     RDELKRLQGLNGGAEAGARGGSEPPPRRSDRPPAGRSDRPPARRSDRPPARGGWKRR"
BASE COUNT          775 a         1646 c         1647 g          833 t
ORIGIN      
        1 gcgcgggcac gcaggtcggc tcgttcggcg gagtgtcgca cgcgaagagc ggatacgtcg
       61 cctcggcgct cgccgcgagc tcggcgaacg aaaaccccga gtccgccgtg cacacgcgct
      121 gcgaggcgcc gcaaacgtcg agctcgtcgc agcccgacgc gccgagcaaa gcgagcaagt
      181 cggcgcgtcc gtacagcggc tgtccgccgc gtgaaaccag caataaatca gcgggtcctg
      241 cgctgatcag cgccgcgtac ggctcgcgtc cgtgccggtc cacgatgttc acgtccgcga
      301 gcatgcccgg cgcgagccga ccgatcgcgt cgccggcacc gacggctcgc gcgccggccg
      361 tcgtcgccag catgaagagc gcatggtcgt cgagtgcgtg atcgaagtag acgtccgacc
      421 acgtcttggc gcaggcaagc tcgcgcagga ggttcatcga gccggtgagt aaccagtcgg
      481 tgccgagcgc gacctcgacg cccgaacgca ggagcagcgg caccggcgcc gtattgccgt
      541 agagcgcgac gttcgagcgc ggcgaccaga cgacgagcgc cgagcgcgcc gcgaggccgg
      601 ccgcgatcgt cgcgttcgtc gcgacggcgt gaacgacgcc ggaggtcggc tgaacgaggc
      661 cgaaatcagg cgtcatcgcg caaacgagct cattttcggc gttggcatca acgccctcgc
      721 cgaggtgcgc gagaaacgcg cccgcgcgtt cgacggagtc ttcggtcgcg tgagctttgc
      781 cgtaggcaca cccgctcgcg agcaagagtc cgcccgcgtc atcgagcgga aacgtgtcgg
      841 agtcggccgg tgccgtcggc agtccttcgc cgaagtcgcc catgtccgcg ttgcggacga
      901 gtccgtggac gcccgcgccg ccagcgagcg tcgtgacgcc gccgagcaac atccgtagct
      961 cctgcgtcgc gcgttcgact tcgctcgcac cgccggcgta actgagtgcg gcatgaccac
     1021 gtaggccgag ccgccaatcg tggcggtggt cgtagcgctc cgagccgagc ggtcgtggac
     1081 cttcagcgtc gtaggcgacg tgatcgtgcg agttcacgag gcctggcgcg atcacggcgt
     1141 ctgcgcagct cacgagcgtc gcggcagcgg tgtcgcaagc gcagccgacg cagcgaatca
     1201 cgccgccttc gatgcgcacg gcgccgtttt cgtacacgac gcccggcgtg agcacgtcgc
     1261 cacggaacac gacgttgggt ccctcgcccg tgacgctgca gccgctcccc gccgcgggct
     1321 ccgcacacgt gaccacggaa aatgggctca acggcgcctc accgctttcg cagttcgacg
     1381 ggtgggagcc gccgctcgcg acaccagcgc tgcttggttc ggcagacccg gacgcgccgc
     1441 cgcttgctct gttcgcgcca ccttccgctg cgggccctcg tgtccgtgtg cccccgccgt
     1501 tcgacacctc cgcgccaccg gccaggctgt ttccgccgcc gtcatcgcgg ccgctcgcgc
     1561 cagcgacgcg gtctccgcgc ccggcctcgt cttgtcctgc cgcgtcaccg gtttgcgcag
     1621 ggcgcgcgcg tcccgatttc ccgccgcctc cgcgtcccgc cgcaggcagc gacgaacgtc
     1681 cgcgctcctc gcggcagccg agcggaacca gcactgaaag cagcagcaat gacagcgccc
     1741 tggcatgcgc gcaacgcttg cggcgtcgta agaacgatag tgaacggctc ttgcgcgcgg
     1801 ctgacactca cgggaatcgt ccagcctgca cccgagttgc gtgaggctgg cgctattccc
     1861 aaaatgtcgg caccgagtac gcgctgagcg tcgaatcagc cgtgacgagg gtgagcccct
     1921 cctcgagcgc ttgtgccacg agcagtcgag cgaatgcatc gtcatgcagc gctggcagct
     1981 tgccggcgcg tcgggtgtgc tcgaagctca ccctgagctc gttgaaaccg agcgctctga
     2041 gctcactcat gagctcgtcg aggtcgagct cgagcttgcc gagtcgagtc tcgagcgcga
     2101 tttcccacgt gctagcagca ctcacgtaag catcgttcgc cccgtcctcg agcagcgctc
     2161 gcacgcggga cggtagctcg ttgacgcgcg cgacggccca gagcagcgct cgagtgtcga
     2221 ggagcaccct catgccccac ctgcgaaggc cgcgaccaag tcatccgtac tctttggcgg
     2281 gggctcgccc ggcatgcgga tcttgtcgcg tagccggccg agcttgcgct tttttccggg
     2341 ctggccaatg ggcaaaaggc gcgcgaccgg ttccccattc ctggtgatca cgatctcttc
     2401 gcctgccgcg gcgcggcgca cgaggctcga gagctgggtt ttcgcggcgt agatgttcac
     2461 ttccatggtc taccgggcct gatctggtcg gactacaatc acttccgatc cttcgaaccc
     2521 aagtgggtcg tgggtctgac tagagcttcc ccatggtcgg ccgccagctc gcccgagttt
     2581 cctgttttct cctcctcgtg agctgcggcc ggctcgaccg cgagtgccgc ggagtatcgg
     2641 ttactgcgaa tgctttcatc gccgagagcg aacggcagcg accgcgcccg aacgccacca
     2701 cggaggagac gatgaaggcg gagcttgcga cggccgcgcg ctacgacaag ctcgcgtcgg
     2761 acttgaaagc gctgaaggtc gagtccggcg agctttcgcc ggaagtcgag cgctatcgca
     2821 cgctggccga gcactcagcc gagtcgctgc gcgccgtcgc tgcggccttc gggcgcggcg
     2881 atttcgagac cgcgcgcgcc aaacgcgtcg agctcgatcg cgaagcgcgc ggtgagggcc
     2941 cgctcgtgca gaagatcaac gaaatctgcg gcacgaccaa gccggccgcc gacgcctcgc
     3001 tttagcagtc tagcggcttg tccgcgggcc tagcggcgct tccagccgcc acgcgcgggc
     3061 gggcgatcgg agcggcgcgc aggcgggcga tccgagcggc ctgcgggcgg acgatccgag
     3121 cggcgcggcg gcggttcgga gccgccgcga gcgccagctt ctgcgccgcc gttcaagcct
     3181 tgcaggcgct tgagctcatc gcgcaggcgc gccgcggtct cgaattgcag gttttctgcc
     3241 gcggcgaaca tctcctgccg cagggcttga atgcgctcgg cgcgatcctg ctcggcggtc
     3301 gggctcgtgt cggccggggt tcccccggcg ctgcgcttcg gcacggcgta gtaatcggtc
     3361 gtgccgctcg ccggattcat gtcgaaaatc gcccgcttga tggtctccgg cgtgatgccg
     3421 tgctcgaggt tgtacgcgcg ctgcagcgtg cggcggcggt cggtctcgtc catcgcctgg
     3481 cgcatggcgt cggtgatgcg gtcggcgaac atgatgacct gtccgttggc gttacgtgcc
     3541 gcgcggccga tcgtctgaat caaggagcgc gggctgcgca agaagccctc tttgtcggcg
     3601 tcgaggatgg cgacgaggct cacctccggc aaatccaaac cttcgcgcag gagattgatg
     3661 ccgacgagca cgtcgaattc accggcgcgc aaatcgcgga ggatttccac gcgctcgagc
     3721 gtgtcgatat cggagtgcag gtaacgcacg cgcacgccga gctcggcgta gtactccgtg
     3781 agatcctcgg ccatgcgctt ggtgagcgtc gtcacgagca cgcgttcctg cttttccacg
     3841 cgctttcgga tctcggtcaa gagctcgtcg acctggcccg cgactttgcg caggatgatt
     3901 tcgggatcga tgagtccggt cgggcgaatc aactgctgca cgacctcgcc ctggaccttt
     3961 tcgagctcga aatcgccggg cgtcgccgac acgaagatca cgtgtcgcat gtgcttctcg
     4021 aactcgacga actgcagcgg ccggttgtcg agcgcgctcg gtagccggaa gccgtactcg
     4081 acgagcgttt ccttgcgcga gcggtcgccg cgatacatcg cgccgatctg cggcacggtc
     4141 tggtgcgact cgtcgatcac gagcaagaag tcttcgggga agtagtcgat gagcgtcggc
     4201 ggcggctcgc ccggcgcgcg gcccgagagg tgccgcgagt agttctcgat gccctgcacg
     4261 aagcccatct gatcgagcat ctcgagatcg tacgaggtgc gctgctgcag gcgctgcttc
     4321 tcgagaaaac gcccggcctt gtcgtagaat tcgagacgtt ctctgagctc ctcgcggatg
     4381 cccgcgatcg agcgcgcgag ctgctggcgc ggcgtgacgt agtgcgagcc cgggtagacg
     4441 gcgtattttt cgagctgccc gagcacgcgc ccgcgcaagg gatcgacttc ccgaatggaa
     4501 tcgacctcgt cgccgaagaa ctcgacgcga atggcgcgcg cttcttcgta cgcgggaaaa
     4561 atctcgacga cgtcgccgcg cacgcgaaac gtgccgcggt gaaaatccgt gtcgttgcgc
     4621 tcgtattgaa tatcgacgag ccggcgcagg agctcgtcgc gccgcatctc ctcgcccttg
     4681 acgatttcga tgagtaaccc ggagtacgtc tccgccgagc cgatgccgta gatgcacgag
     4741 acgctcgcga cgatgatcac gtcctcgcgc gacaagagcg cgtgggtcgc ggcatggcgc
     4801 atgcgatcga tctggtcgtt gatgatcgcg tccttctcga tgaaggtatc ggtcgtcggg
     4861 atgtaggctt ccggctggta atagtcgtag tagctgacga a
//
LOCUS       DATIML010001144         1784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_236892, whole genome shotgun sequence.
ACCESSION   DATIML010001144 DATIML010000000
VERSION     DATIML010001144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236892"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /locus_tag="VLJ38_19755"
     CDS             <1..561
                     /locus_tag="VLJ38_19755"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HSU41829.1"
                     /translation="DFIDLFSRTHPMIVPLLFVPGAAFGFVRNMTHGGQSVAVTLALF
                     VGGFVAWTLAEYWLHRLFFHWTPPGRWGERMHFLVHGVHHTWPRDKYRLVMPPAVSIS
                     LYFIFLGIFWVTLGPHYAWGFHSGFVVGYMFYDLTHYYLHHFRPRTEYGRRLKKNHML
                     HHFKEPSKRYGVSNMVWDRVFGTAPR"
     gene            564..>1784
                     /locus_tag="VLJ38_19760"
     CDS             564..>1784
                     /locus_tag="VLJ38_19760"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HSU41830.1"
                     /translation="MRDTPGRHLRLPVLTIEKLVPGGAGFCRLPDGRPAFVPGALPGD
                     RVRVGSLADKKGYVEATAFELEAPGPERVEPPCSIAAPCGGCDWMALPLAAQLRYKAS
                     LVAEALARTGRLELPVPPEVVSAGDPLGYRLRVRLHVDEVGRVGFFGPRSREIVEVAD
                     CLVVAPELRVAVRALAELAMPERATLGEYFCALDLRAVPGEGGVELELEPREGVRMRE
                     RAVEALVRALGASARVGFSTRRRAGLRRYELPGGGFLRVPSGGFTQVNWAVNAALVAA
                     VVSGAERRGAKSFLDLYAGVGNFSVPLARAGLTGTAVEVEAGSVAALREALREQALTG
                     LDVVAGDVARALGRLRGPRKGVDLALLDPPRAGAKEAIAPLILLEPKTIAYVACDPVT
                     LARDLRRLVDAGWGL"
BASE COUNT          226 a          582 c          645 g          331 t
ORIGIN      
        1 gatttcatcg atctgttctc gaggacgcat ccgatgatcg tgccgctctt gttcgtaccc
       61 ggcgcggcgt tcggcttcgt acgcaacatg actcacggcg ggcagagcgt cgccgtgacg
      121 ctcgcgctgt tcgtcggcgg cttcgtggcg tggacgctcg ccgaatactg gctgcatcgc
      181 ctgttcttcc attggacgcc gcccggacgc tggggtgagc gcatgcattt tctcgtgcac
      241 ggcgtccacc acacgtggcc gcgcgacaag taccggctcg tgatgccgcc ggccgtgagc
      301 atctcgctct atttcatctt cctcggcatc ttctgggtga cgctcggccc gcactacgcg
      361 tggggtttcc actcgggttt cgtcgtgggc tacatgtttt acgacctgac ccactattac
      421 ctacatcact tccgtcccag gaccgagtac gggcggcgct tgaagaagaa ccacatgctg
      481 catcacttca aggagccctc gaagcgatac ggcgtgtcga acatggtgtg ggaccgcgtg
      541 ttcggcaccg cgccgcgctg agcgtgcgcg acactcccgg ccgccacctt cggctccccg
      601 tcctcacgat cgaaaagctc gtccccggcg gcgcgggctt ttgccgttta ccggacggca
      661 gacctgcgtt cgtgcccggc gctctccccg gtgatcgcgt gcgagtgggc tccctcgccg
      721 acaagaaggg ctacgtcgag gcgacggcgt tcgagctcga agcgccgggg cccgaacgcg
      781 tcgagccacc gtgttcgatc gccgccccgt gcggcgggtg cgattggatg gcgctgcccc
      841 tagcggcgca gcttcgctac aaagcgtcgc tcgtggcgga agcgctcgca cgcaccgggc
      901 ggctcgagct gcccgtgccg cccgaagtgg tgagcgccgg ggacccgctc ggctatcggc
      961 tgcgcgtgcg gcttcacgtg gacgaggtgg ggcgcgtcgg attcttcgga ccgcggtcgc
     1021 gggagatcgt cgaggtagcg gactgtctcg tggtggcgcc cgagctacgc gttgcggtgc
     1081 gggcgcttgc cgagctcgcc atgcccgagc gcgcgacgct cggcgagtat ttttgcgcgc
     1141 tcgatttacg cgccgtgcct ggcgaaggcg gcgtcgagct cgagctcgag ccgcgtgaag
     1201 gcgtgcgcat gagggagcgc gcggtcgagg cgctcgtgcg tgcgctcggc gcgagcgcgc
     1261 gcgttggatt ttcgacgcga cggcgtgcgg gactgcggcg ctatgagctg cccggcggcg
     1321 gctttttgcg cgtgccgtcc ggcggcttca cgcaggtgaa ttgggccgtc aacgcggcgc
     1381 tcgtcgctgc ggtggtgagc ggtgcggaac gtcgtggcgc caagtcgttt ctcgatctgt
     1441 acgccggcgt cggtaacttc agcgtgccgc tcgcgcgtgc aggtctcacg ggtaccgcgg
     1501 tcgaggtcga agccggatcc gtcgccgcgt tgcgcgaggc actgcgcgag caggcgctca
     1561 cggggctaga cgtcgtggcc ggagacgtgg cgcgcgcgct cgggcggctg cgtggtccgc
     1621 gcaagggcgt ggatctcgcg ctgctcgatc cgccgcgcgc gggcgccaag gaggcgatcg
     1681 cgccgctgat tctgctcgag ccgaagacga tcgcgtacgt tgcttgcgac ccggtgacgc
     1741 tcgcacgcga cctacgacgg ctggtggacg cggggtgggg gctg
//
LOCUS       DATIML010001145         2576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5441748, whole genome shotgun sequence.
ACCESSION   DATIML010001145 DATIML010000000
VERSION     DATIML010001145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5441748"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VLJ38_19765"
     CDS             <1..748
                     /locus_tag="VLJ38_19765"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HSU41831.1"
                     /translation="PVPYPVGPAAPTGMHQDLSEADYITKVLKPAVDYARDNKLYAII
                     DYHQIDDAAGQSGTDAVSFLTSVAPAFASYDNVIFEPFNEPIDTKTAWADFKPTVQSF
                     ITAIRAAAPNNLIIVPSMNWDQRPGDAASSPPSGSNLVYTAHVYPGNWSDGFKQHVAT
                     AAAVAPVFFSEWGYVLNGTDKNLGTADANWGPDFQTLVDANGASWSAWVADGSWTPNL
                     FTNPSLSSLSAFGTFTASWLAGKATSDWVF"
     gene            complement(759..2093)
                     /locus_tag="VLJ38_19770"
     CDS             complement(759..2093)
                     /locus_tag="VLJ38_19770"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU41832.1"
                     /translation="MAALALVSVTAGCANHDDLSLSKQREQTSSEIPKVPVPPENGPK
                     LASIADLTPVYERPATSARRIGYLHAGDRVSRAATPYTREGCADGWFPVRPAGFVCAS
                     GSATTDLRHPTLAAMAIQPLLDQPLPYTYARTITETPLYERDGAHENTVREIGKLKRR
                     SGMAVVGSWTAAVLGNAPERLALLTNGKFVKAADLEAATPSTFHGVELGEKQTLPLAF
                     VVKHGVRDFKLDGEDAELGRDLEVHTALDLTGKFRTAHGEKFWAISNGRWVRHKDVTT
                     VLARNVFPDFAVEGQKWLDVSAVTGTLVAYEGKRPFFATLVSIGRETAPAAAEDTVNV
                     DVASPSAAFGLGTFDIRAKHITLVGADPLALRENFQLYDVPWVFELSSGRLAYGAYWH
                     DRFGIEHGSGGLELSPADAARLFQWLTPSVPDGWHGVSTLHGEAKTLVVIRK"
     gene            complement(2320..>2576)
                     /locus_tag="VLJ38_19775"
     CDS             complement(2320..>2576)
                     /locus_tag="VLJ38_19775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HSU41833.1"
                     /translation="ADVRDFEPRRALDGGADGLDLVRRVIAEAGAHLTPGGVLAVEIG
                     HDQGARTRELFEGAGFRELALRRDYGGRDRIVSGVFGNSS"
BASE COUNT          423 a          846 c          882 g          425 t
ORIGIN      
        1 gcccgtgccg tatccggtcg gccccgcagc gccgacgggc atgcaccagg acctcagcga
       61 ggcggactac atcacgaaag tcctgaagcc agcggtcgat tacgcacgcg acaacaagct
      121 ctacgccatc atcgattatc accagatcga cgacgcggct ggccagtcgg gcacggacgc
      181 cgtcagcttt ttgaccagcg tggcgcccgc gttcgcgagc tacgacaacg tcattttcga
      241 gccgttcaac gagcccatcg acacgaagac ggcgtgggcc gacttcaagc ccacggtgca
      301 gagcttcatc accgcgatcc gcgccgcggc gccgaacaat ctcatcatcg tcccctcgat
      361 gaactgggat cagcggcccg gcgacgcggc gagttcgccg ccctcgggct cgaacctcgt
      421 gtacacggcg cacgtctacc ccggcaactg gagcgacggc ttcaagcagc atgtcgcgac
      481 ggcggccgcc gtcgcgcccg tcttcttcag cgagtggggc tacgtcctga acggcacgga
      541 caaaaacctc ggcacggccg acgccaactg gggccctgac tttcagacgc tcgtggacgc
      601 gaacggcgcc agctggagcg cgtgggtcgc ggacggcagc tggacgccga acctatttac
      661 gaatccgtcg ctctcgtcgc tctcggcgtt cggcacgttc acggcgagct ggctcgcggg
      721 caaagccacg agcgactggg tgttttagcg aactctcgtc acttgcggat cacgacgagc
      781 gttttggctt cgccgtgcag cgtgctcacg ccgtgccagc cgtcggggac gctcggcgtg
      841 agccactgaa agaggcgcgc ggcgtcggcg ggagagagct cgagaccgcc cgagccgtgc
      901 tcgatgccga aacggtcatg ccagtaggcg ccgtaggcga gccgccccga ggaaagctcg
      961 aatacccagg gtacgtcgta gagctggaag ttctcacgta gcgccaaggg gtcggcgccg
     1021 acgagcgtga tgtgcttcgc gcggatgtcg aacgtgccga ggccgaacgc cgccgagggc
     1081 gacgctacgt cgacgttgac ggtgtcttct gcggccgcgg gcgcggtctc gcgaccgatg
     1141 ctgacgagcg tcgcgaagaa cgggcgcttg ccctcgtacg cgacgagcgt gcccgtgacg
     1201 gcgctcacgt cgagccactt ctggccttcg acggcgaaat cggggaagac gttgcgagcg
     1261 agcaccgtcg tcacgtcttt gtgccgcacc cagcggccgt tcgagatggc ccagaatttc
     1321 tcgccgtgcg ccgtgcgaaa tttgcccgtc agatcgagcg ccgtatgcac ctcgagatcg
     1381 cgcccgagct ccgcgtcttc gccgtcgagc ttgaagtcgc ggacgccgtg cttgacgacg
     1441 aacgcgagcg gtaacgtctg cttttcgccg agctcgacgc cgtggaacgt ggacggcgtt
     1501 gctgcttcga ggtcggcggc tttcacgaat ttgccgttcg tgagcagggc gagccgctcg
     1561 ggggcgttgc cgaggacggc ggccgtccag ctgccgacga cggccatgcc cgagcggcgc
     1621 ttgagcttgc cgatctcgcg gacggtgttt tcgtgcgcgc cgtcgcgctc gtagagcggt
     1681 gtctccgtga tggtgcgcgc gtaagtgtag ggtagcggct gatcgagcag cggctggatc
     1741 gccatcgcgg cgagggtcgg gtggcgtaga tccgtggtcg cgctgccgct cgcgcagacg
     1801 aaccccgcgg gacgcacggg aaaccagccg tcggcgcagc cttcgcgcgt gtacggcgtg
     1861 gcggcgcgag aaacgcgatc gcccgcgtgc aagtacccga tccggcgcgc gctcgtcgcg
     1921 ggtcgctcgt acacgggggt cagatcggcg atcgaggcga gcttcgggcc gttctcgggt
     1981 ggaacaggca ctttcgggat ctcgctcgag gtttgctcgc gctgtttcga aagcgagagg
     2041 tcgtcgtgat tcgcacaccc ggcggtcacg gagacgagcg cgagcgctgc catgactctg
     2101 gcagtccttg gcagggacag atcacgatcg acacacgtgg acacgagcac acgtaaaacc
     2161 ggcgagtccg gcggacggcc gtcgttcaat tcgctagcat cgccaggcgc tactggtcgt
     2221 cgaagctgcc ggtccatttt caccgagtga catgcgggct ggggttgggc caagttttgg
     2281 ccccgcgtgc gcccaactca cccaacaatc aggacgccgt tacgacgaat tcccgaacac
     2341 accgctcacg atgcgatccc ggcccccgta gtcgcggcgt agggctagtt cccgaaatcc
     2401 tgcgccttcg aagagctcgc gcgtgcgtgc gccctggtcg tggccgatct cgacggcgag
     2461 cacgccgcct ggcgtgagat gcgccccggc ttcggcgatg acgcggcgta cgaggtcgag
     2521 cccgtccgcg ccgccgtcga gcgcgcgccg cggttcgaag tcgcggacgt cggcgt
//
LOCUS       DATIML010001146         2241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5153242, whole genome shotgun sequence.
ACCESSION   DATIML010001146 DATIML010000000
VERSION     DATIML010001146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5153242"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..982
                     /locus_tag="VLJ38_19780"
     CDS             <1..982
                     /locus_tag="VLJ38_19780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41834.1"
                     /translation="ACPSEDGKRVFEVGGGATVTLTGDSMHDWGDCPTLARVTESGSF
                     ALDGGIIHFSGTAEPAVFSAAASSKLVLSNLRAVDGDRTLLALADDSDTTILASTFET
                     SANNAIVLGDRASLDMTNSELSLGAAPLPDACILSNLDGPSTVTLAYSLIHGCRAGLS
                     GAAPATLTINHTAFYGMTESGLDLTTADGSVIELEAASFYADALRAARFGGGNPSVFH
                     LTVHGTSVATVPTGFDLAGDAGSSWDFGTLAKSGANSFNADTTSLLLSSASIATVTAI
                     GNTWAPNVQGADTDGHYVAAGAGGVLEVTSGSGRNYDDTVGATLRLAENP"
     gene            complement(987..>2241)
                     /locus_tag="VLJ38_19785"
     CDS             complement(987..>2241)
                     /locus_tag="VLJ38_19785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41835.1"
                     /translation="TTPGMPVKWPFFEGDSRSLLYVETDPNEYCSADANNGTCSSVTN
                     DAYATAVCSGTTTASVNTNLERACYQAAYGSMSPTTRGFWPGRIYSIDTSASNPASTR
                     TELSHLDDAEDTTDADKAYQPTVLPFTAGGKRWVIFTSPRAYGNQFNQKSPSGTPTDF
                     SCGASMLWVSALDDRTAAAGDDRSHPAFFMPGQQVLKITQSPHYVNERGYLVPSPCKS
                     SGTSCSVDEECCGSSDTPASAACRAPLGWDPSTGAPQKKCEALSGTCQNAGESCGTAA
                     DCCNGASCIAYACAGGGHYTEATFAREYVATCPAGQLPVWTVYSYHLTTGGDSKLIFS
                     AQTSDDLSMLDAAKVVSLGSSIGDAVSPAAAEAIDVGSKLVAAKVSKNLVNLRILVKL
                     EPSTDGSIAPVLHDWEMRYTCQDQL"
BASE COUNT          351 a          743 c          754 g          393 t
ORIGIN      
        1 cgcgtgtcca agtgaggacg gcaagcgcgt cttcgaagtc ggcgggggcg cgaccgtcac
       61 gctgacgggc gattccatgc acgactgggg cgactgcccg acgcttgctc gggtaacgga
      121 gagcggcagt ttcgcgctcg acggcggcat catccatttc agcggcaccg cagagcctgc
      181 cgttttctcg gccgctgcga gcagcaagct cgtgctttcg aatctgcgcg ccgtcgacgg
      241 cgatcgcacg ctgctcgcgc tcgcggacga ttccgacact acgattttgg cctcgacgtt
      301 cgagacctcg gcgaacaacg ccatcgtgct cggcgaccgg gcctctctcg atatgacgaa
      361 cagcgagcta tcgctcggcg cagctcccct acccgacgct tgcattctgt cgaacctcga
      421 cggcccgagc accgtcaccc tcgcttactc gttgattcac ggctgtcgcg ccggcttgag
      481 cggcgccgcg cccgccacgc tcaccatcaa ccacacggcc ttctacggca tgactgaaag
      541 cggcctcgat ctcacgaccg ccgacggcag cgtcatcgag ctcgaggcgg cttcgttcta
      601 cgcggacgct ctccgcgcgg cacgcttcgg cggcggcaac ccgagcgtgt ttcatctcac
      661 cgtgcatggc acgagcgtcg ccacggttcc gaccgggttc gacctcgcgg gtgacgccgg
      721 ctcgagctgg gacttcggga cgctcgccaa gtccggcgct aacagcttca acgccgacac
      781 gacctcgctc ctcttgtcta gcgcgagcat cgcgaccgtc acggcgatcg gcaatacctg
      841 ggctccgaac gtgcaaggcg cggacacgga cggacattac gtcgccgcgg gcgcgggcgg
      901 cgtcctcgaa gtcacgagcg gcagcggacg gaactacgac gacacggtcg gcgcaaccct
      961 gcgcctcgcc gaaaatccgt gagcgctcac agctggtcct ggcaggtgta acgcatctcc
     1021 cagtcgtgca gaaccggcgc aatcgagccg tcggtcgagg gctcgagctt cacgaggatg
     1081 cgaagattga cgaggttctt ggagactttg gccgcgacga gcttgctgcc cacgtcgatc
     1141 gcctccgctg cggcgggact cacggcgtcg ccgatagagc tgccgagcga cacgaccttc
     1201 gccgcgtcga gcatggagag atcgtcgctc gtctgcgcgc tgaagatgag cttgctgtcg
     1261 ccgcccgtcg tcaggtgata gctgtagacg gtccagactg gcagctgacc ggcgggacaa
     1321 gtggcgacgt actcgcgcgc gaacgtcgct tcggtgtagt ggccgccccc cgcgcacgcg
     1381 tacgcgatgc acgaggcgcc gttgcagcag tcggcggcgg taccgcagct ctcacccgcg
     1441 ttttggcacg tgccggaaag cgcctcgcac ttcttctgcg gagcacccgt cgagggatcc
     1501 cagccgagcg gcgcgcggca agctgcagac gccggcgtgt cgctcgagcc gcagcactcc
     1561 tcgtccaccg agcagctcgt gccgctgctc ttgcacggcg agggcacgag gtagccgcgt
     1621 tcgttcacgt agtggggcga ctgcgtgatc ttgagaacct gctggccggg catgaaaaag
     1681 gcgggatggc tgcggtcgtc gcccgctgca gcagttcggt cgtcgagcgc ggagacccag
     1741 agcatgctcg cgccgcagct gaagtcggtc ggcgtgcccg agggtgactt ctgattgaac
     1801 tggttaccgt acgcgcgcgg gctcgtgaag atcacccagc gtttaccgcc cgccgtgaag
     1861 ggcagcacgg tcggttggta cgccttgtcg gcgtccgtcg tgtcttccgc gtcgtcgagg
     1921 tgcgacagct cggtgcgcgt ggatgccgga ttcgaggcag aggtgtcgat cgagtagatg
     1981 cggccaggcc agaagccgcg cgtcgtcggg ctcatgctgc cgtaggcggc ctgatagcaa
     2041 gcgcgctcga ggttcgtatt gacgctggcc gtcgtcgtgc cggagcacac ggcggtggcg
     2101 taggcgtcgt tcgtcacgct gctgcaggtg ccgttgttcg cgtccgcgct gcagtattcg
     2161 ttcggatcgg tctcgacgta gagcaggctg cggctgtcgc cttcgaagaa cggccatttg
     2221 acgggcatgc ccggcgtcgt c
//
LOCUS       DATIML010001147         3312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_529156, whole genome shotgun sequence.
ACCESSION   DATIML010001147 DATIML010000000
VERSION     DATIML010001147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3312
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529156"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1565
                     /gene="ureC"
                     /locus_tag="VLJ38_19790"
     CDS             <1..1565
                     /gene="ureC"
                     /locus_tag="VLJ38_19790"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018041073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HSU41836.1"
                     /translation="GKVIRDGMGQSQRTSAEAVDTIITNALIIDHWGIVKADIGLKGG
                     RIHAIGKGGNPDVQPGVDIVIGPGTEVIAGEGLIAVPGGIDAHIHFICPQQIDDALMS
                     GVTTMIGGGTGPAAGTNATTCTPGPFHLAQMLKAADGLPMNLGFLGKGNASLPAALDE
                     QVVAGALGLKLHEDWGTTPAAIDCCLGVAERFDVQVAIHTDTLNESGFVEDTFAAFKG
                     RTIHAYHTEGAGGGHAPDIIRACGEPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLD
                     PSIPEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVGIRTWQTAHKM
                     KVQRGSLPEDPREHDNFRVRRYLAKYTINPALAHGIAHEVGSLEVGKLADIVLFSPAF
                     FGVKPAMIIKSGTIVAAPMGDPNASIPTPQPVHYRPMFGAIGGALATTSVTFVSQAAL
                     ASGIPEKLRLQKRAVAVRGTRTVTKRDMVHNALLPKIEVDPQTYEVRADGELLSCEPL
                     KALPMTQRYFLF"
     gene            1569..2123
                     /gene="ureE"
                     /locus_tag="VLJ38_19795"
     CDS             1569..2123
                     /gene="ureE"
                     /locus_tag="VLJ38_19795"
                     /inference="COORDINATES: protein motif:HMM:NF009751.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HSU41837.1"
                     /translation="MQRASRSTKAVPQRLEGVVVLDFDARQKHRFLAKLEGGGELAVE
                     LPRGSVLADGDYLETGLNAGVLVRAAAEELSVARAADALLVARVAYHLGNRHVALQIE
                     PTCVKYRHDHVLDDLCRRLGAEVSFESAPFSPEGGAYGRGGHQEHRAHQHGHGHSHAD
                     DHAQADAQAHDHDHEPLHHDGTRR"
     gene            2120..2866
                     /locus_tag="VLJ38_19800"
     CDS             2120..2866
                     /locus_tag="VLJ38_19800"
                     /inference="COORDINATES: protein motif:HMM:NF013858.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory UreF family protein"
                     /protein_id="HSU41838.1"
                     /translation="MSALGDRTDAALGPHAVSDGEIAVSLAPAALLRLLQLASPALPI
                     GSFAYSQGLETAVELGLIRDETSAREFLTGVLQDGLALLELPLLSRLYAAFLQQDERS
                     VERWSAFLLASRETAERREEERHLGRALARLLADQGIAEAAAWHGRESVTHLALFALA
                     GASFGVPEEALVPAYAFSWAESQVGALSRLVPLGQLSAQRVLAALGALVPAACARAAL
                     LADAEIGSTLPGLALASALHETQYTRLFKS"
     gene            2874..>3312
                     /gene="ureG"
                     /locus_tag="VLJ38_19805"
     CDS             2874..>3312
                     /gene="ureG"
                     /locus_tag="VLJ38_19805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HSU41839.1"
                     /translation="MTAASRETLRVGVGGPVGSGKTALVDSLCKAMRERFRMAVVTND
                     IYTREDADFLIRSGALSEDRVLGVETGGCPHTAIREDASINLEAVDALMTRHGPLDLV
                     IIESGGDNLAATFSPELSDLTLYVIDVAAGDKIPRKGGPGITRS"
BASE COUNT          548 a         1197 c         1058 g          509 t
ORIGIN      
        1 gcggcaaggt gattcgcgac ggcatgggcc agagccagcg tacgagcgcc gaagccgtcg
       61 acaccatcat cacgaacgcg ctcatcatcg atcattgggg catcgtgaag gccgacatcg
      121 gcctcaaggg cgggcgcatt cacgctatcg gcaagggcgg caaccccgac gtgcagccgg
      181 gcgtggacat cgtgatcggc ccgggtaccg aggtcatcgc gggcgagggg ctcatcgccg
      241 ttcccggcgg gatcgacgcg cacatccatt tcatctgtcc gcagcagatc gacgacgcgc
      301 tcatgagtgg cgtgacgacg atgatcggcg gcggcacggg tccggcagcg ggcacgaacg
      361 cgacgacctg cacgcccggt ccctttcacc tggcgcagat gttgaaggcc gccgatggct
      421 tgccgatgaa cctcggtttc ctcggcaagg gcaatgcaag ccttccggcg gcgctcgacg
      481 agcaggtcgt cgccggcgcg ctcggcctga agctgcacga agactggggc acgacgcccg
      541 ccgcgatcga ctgctgcctc ggcgtcgccg agcgcttcga cgtgcaagtg gcgattcaca
      601 ccgacacgct gaacgagtcc gggttcgtgg aggacacgtt cgccgcgttc aagggccgca
      661 cgattcacgc ctatcacacc gaaggcgccg ggggcgggca cgcgcccgac atcatccgcg
      721 cctgcggcga gccgaacgtg cttccgtctt ccaccaaccc gacgcgcccg tacacggtga
      781 acaccatcga cgagcacctc gacatgctca tggtctgtca ccacctcgat ccgagcattc
      841 ccgaggacgt ggccttcgcc gaatcgcgca ttcgccggga gacgatcgcc gccgaggaca
      901 tcctgcacga tcttggcgcc ttcagcatga tctcgtccga ttcgcaggcg atgggccgcg
      961 tcggcgaggt cggcatccgc acctggcaaa ccgcgcacaa gatgaaggtg cagcgcggca
     1021 gcttgcccga ggatccgcgc gagcacgata acttccgcgt gcgccgctac ctcgcaaaat
     1081 acacgatcaa ccccgcgctc gctcacggca tcgcgcacga ggtcggctcg ctcgaggtcg
     1141 gcaagctcgc cgatatcgtg ctgttctcgc ccgcgttctt cggcgtgaag cccgccatga
     1201 tcatcaagag cggcacgatc gtggcggcgc ccatgggcga cccgaacgct tcgatcccca
     1261 cgccgcagcc cgtgcactat cgaccgatgt tcggcgccat tggcggcgcg ctcgcgacga
     1321 cgagcgtcac cttcgtctcg caggcggcgc tcgcgtcggg tatccccgaa aagctgcgtc
     1381 tgcaaaaacg cgcggtcgcc gtacggggca cgcgtaccgt caccaagcgc gacatggtgc
     1441 acaacgcctt gttgccgaaa atcgaggtcg acccgcagac gtacgaagtg cgcgccgacg
     1501 gcgagctgct cagctgcgaa ccgttgaagg cgttaccgat gacacagcgt tatttcttgt
     1561 tttaggcgat gcaacgcgct tcacgttcga ccaaggccgt gccgcagcgc ctcgagggcg
     1621 tcgtggtgct cgacttcgac gctcgtcaaa aacatcgatt tttggccaag ctcgagggtg
     1681 ggggagagct cgccgtggag ctgccgcgcg gcagcgtgct cgcggacggc gactacctcg
     1741 agaccgggct gaacgccggt gtgctcgtgc gcgccgcggc tgaagagctc agcgtcgcgc
     1801 gcgcggccga tgcgctgctc gtcgcccgcg tcgcgtatca cctcggcaac cggcacgtgg
     1861 ctctccagat cgaacccacg tgcgtgaagt atcggcacga ccacgtgctc gacgacctct
     1921 gccgccggct cggcgccgag gtcagcttcg agtcggcgcc gttctcgccg gaaggcggcg
     1981 cctacggccg cggcggccat caggagcacc gcgctcacca gcacggccac ggccattctc
     2041 acgcggacga ccacgcgcaa gccgacgcgc aggcgcacga ccacgaccac gagcctctgc
     2101 accacgacgg gacgcggcga tgagcgccct cggcgaccgc accgacgccg cactggggcc
     2161 acacgccgtc agcgacggtg aaatcgccgt ctcgctcgct cccgccgcgc tgctccgcct
     2221 gcttcagctt gcgagccctg cgttacccat cggctccttt gcctactcgc aaggcctcga
     2281 aaccgccgtc gagctcggct tgatccgcga cgaaacgagc gcgcgcgagt tcttgacggg
     2341 cgtcttgcaa gacggactcg cgctgctcga gctcccgttg ctctcgaggc tctacgcggc
     2401 gttcctgcag caggacgagc gtagcgtcga gcgctggtcc gcgttcctcc tcgcctcgcg
     2461 cgaaaccgcc gaacggcgtg aagaggagcg gcacctcggt cgcgcgctcg cgcgcttact
     2521 ggccgatcaa ggtatcgccg aggctgccgc ctggcacggt cgcgaaagcg tgacgcacct
     2581 cgcgctcttc gcgctcgcgg gggcgtcgtt cggcgtaccc gaggaggcgc tcgtgcccgc
     2641 ctacgcgttt tcatgggccg aaagccaggt cggcgccctc tctcgactgg tgccgctcgg
     2701 tcaactttcg gcgcagcgcg tgctcgcggc gctcggcgcg ctcgtgcccg cggcctgcgc
     2761 gcgcgccgcg ctgctcgccg atgccgaaat cggctcgacc ttgcctggcc tcgccctcgc
     2821 gagcgccctg cacgaaaccc aatacacgcg cctcttcaaa tcgtgaggaa cccatgaccg
     2881 cggcatctcg agaaaccctg cgcgtcggcg tcggcggccc cgtgggctcc ggcaagaccg
     2941 ccctcgtcga ctcgctctgc aaagccatgc gcgagcgctt tcgcatggcc gtcgtcacca
     3001 acgacatcta cacgcgcgaa gacgccgatt tcctcatccg cagcggcgcc ctcagcgaag
     3061 atcgcgtcct cggcgtcgaa acgggcggct gcccgcacac cgcgatccgc gaagatgcct
     3121 cgatcaacct cgaggccgtc gacgcgctca tgacgcgcca cggcccgctc gatctcgtca
     3181 tcatcgagag cgggggcgac aacctcgcgg cgacgttcag ccccgagctc tccgatctca
     3241 ccctgtacgt catcgacgtc gcggccggcg acaagatccc gcgcaagggc gggccgggga
     3301 tcacccgctc gg
//
LOCUS       DATIML010001148         7920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_819572, whole genome shotgun sequence.
ACCESSION   DATIML010001148 DATIML010000000
VERSION     DATIML010001148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7920
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819572"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..955)
                     /locus_tag="VLJ38_19810"
     CDS             complement(<1..955)
                     /locus_tag="VLJ38_19810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012232637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSU41840.1"
                     /translation="MERVIGIDLGTTNSCVSILEGDVPIVITNRGGYKTTPSVVAVTE
                     AGKRLVGHIAKRQAITNAENTVYAAKRLIGRKWNSPQVKNSIMTSSYTIVEGPHNDVR
                     IRLRDKTYSVPEVSSMVLQEMKVIAEDYLGEPVKKAVVTVPAYFNDNQRQATKDAGAI
                     AGLDVIRIINEPTAASLAYGYGKDMDRTVAVYDLGGGTFDISILEIGAHGVFKVISTT
                     GDTFLGGEDFDARIIDWLVSGFQDEHGIDLRQDRMALQRLRDAAEKAKCELSGVRETE
                     INLPFIISSGRNEALHLQRALSRNILEELSADLVERTIDICK"
     gene            complement(994..2565)
                     /locus_tag="VLJ38_19815"
     CDS             complement(994..2565)
                     /locus_tag="VLJ38_19815"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HSU41841.1"
                     /translation="MALLDKDRRLRLADGVDLRALPLTPEDAFVLSHLDGTASESDIA
                     LATGLDAHVIRRSLEKLNGLGALAVSSSNPAPRTPRPSGSNSISPSGTFKIHVGAVIE
                     QAATPKAHRPAAALYDPAELDEPVDLDKERRRKVLDTYYRLSTLSHYELLAIEQSADK
                     KAIKAAYFELVNAFHPDRYFGKNLGSFKPKLERLFARVTEAHDVLTRQAAREEYDKYL
                     SSVQRTRALDRSLTDANVAAGEVERLKREIQEQVQLEEKRRHSYPAPAPVPSAPPFTQ
                     RSIATPTPPPVSANHSFRPADVDARRRALARKLGVSLPPPARVPSSPLPQTDFSAREA
                     ATADLKRRYEERVVELKSRQVQRYVSASEEAESRRDLVSATNALRIATSLAPDDAALS
                     GRLRDLEARVVAGLADSYVEQAQYEEREGRFLEAAASYRRASRGKPTPHVLERIAHCL
                     YSAKGDLREAADFAKRARDAAPDDPNLRLTLGKIYFEAGMKQSAAAEFERAQQLAPKD
                     DTIKDWLRRARKGEA"
     gene            complement(2652..3200)
                     /locus_tag="VLJ38_19820"
     CDS             complement(2652..3200)
                     /locus_tag="VLJ38_19820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41842.1"
                     /translation="MRQSSSLLACALALVACSGRPTDVCAGEQGRAVGTALLAFLSRS
                     RAAHHRADAREEQKDLAAAEAELSAVVSGPKPPCPNAAEVREVLADTRARLAELRSRH
                     GAFDAAAADVDQGLTLVHERSYFRGHLMEVRGLVEERRSKALTAAGDAAGARAAEERA
                     LAAFQEAMRIQAAVIEQVVSKP"
     gene            complement(3200..3787)
                     /locus_tag="VLJ38_19825"
     CDS             complement(3200..3787)
                     /locus_tag="VLJ38_19825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41843.1"
                     /translation="MTTPETPEFPDDGATPLAPAEEAVLARALRAAYVPTELAPERHA
                     EILRAALDDPFAPASADELRESARLRHALEDRDVSHPDAALARALAAAVNPTPLGRAT
                     ALELSRRARRKPNVVFVTFGAFGLAVAAAFALFVARARNPAHEALPALARSRTTQDLF
                     REPFDPNRTSERIDRIAEARARDARENRYALWGVR"
     gene            complement(3784..4509)
                     /locus_tag="VLJ38_19830"
     CDS             complement(3784..4509)
                     /locus_tag="VLJ38_19830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSU41844.1"
                     /translation="MRSLGMQLGALPLAGPEGLLNAFWRTGVGTRASWVGPGPPSRVR
                     AVLAPEELETERGLCERACAGDRTALGSLLERHGPRLYRAVLLPRLGNPALAEEALSL
                     TYLRVVERIGRFEWQSVGIYPWLRVVALRIALDQLRARRREVLFDAADLERELDQAER
                     ETRDAAELEAHDLGAAKARVVALLERLHPRYAEAIRLRVLEERPRAEAAEKLGVSVGT
                     FDVVLHRAMAALRKVLDAEERDP"
     gene            4577..5437
                     /locus_tag="VLJ38_19835"
     CDS             4577..5437
                     /locus_tag="VLJ38_19835"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HSU41845.1"
                     /translation="MAARLCPYCKELNSVGERRCYRCGRRLPGPAADGALRVVQQVLG
                     VEAPVTRILLFLELAVFALCVIVEHTIPDGIGFFGFLGLKPAFSASTLLRFGALGGTL
                     GHTEPWRYLSAVFVHAGALHVGMNLWIFTSLGYALERELGGARFALLFLLSGALGFVA
                     SSYWYAPVEPLTMGASGGVFGQIGAWVGILGARRDPEWKNVFVRNLIYAVLLSLALGN
                     VNTPAHLGGFAAGIALGFLFGREKPSWRLEWPLRLLAAVGLCAVVASVGLSMRSPIWQ
                     VVHLQESRYE"
     gene            5453..6685
                     /locus_tag="VLJ38_19840"
     CDS             5453..6685
                     /locus_tag="VLJ38_19840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylation factor-like protein"
                     /protein_id="HSU41846.1"
                     /translation="MPVVNPLSREVVFKVVYYGPGLGGKTTSLQHIHATTRAEHRGKM
                     VSLATPVDRTLYFDFLPIRLPSVHGMGVRLQLFTVPGQVYYNATRKLVLTGADGLVLV
                     FDSQSDRLDANSESLENLNENLMAHGRSLGQVPHVIQYNKRDLATALSLDELERQFNR
                     HLAPSFGSVAMTGEGVYEALEAVTRAVLEHFEQRMPGERPDSMPALDIPEGGLADALR
                     GAGSDADDVHESARLAAVELRLSQVPEQDPGEAAARLAVGEALHEPEPEHEEAALPES
                     APPVAVERAVPPAPAFSSPRGRASFDLLWPPTERGIVRELEACLADGDYSRAVAGSEA
                     LVARSLAGAAAALGPNDAPRDAATVAVVLGIDGRRYLEFRSLAREARAGRGISATEAL
                     VAYALAIEIRIARAGVAG"
     gene            complement(6732..>7920)
                     /locus_tag="VLJ38_19845"
     CDS             complement(6732..>7920)
                     /locus_tag="VLJ38_19845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41847.1"
                     /translation="KTSMALLGVRPSYAGERAVLQGYVASAWQDTTCADLPGSPPDED
                     GPLVASRDKFPVPLLVPTDTKLAVTLRAARFAWGCTTVNSATEGAQNDVEVVMTNVPM
                     TLDASVVDFTLGLDSPDAFDAALAEPQQAMLAAVLRDADDDTAALLDAMSENASSTKT
                     FADARTSLDWDAVVREKLGASATSAVRAPLARWIARALDEEHVLGGLTGTLRGTPGGP
                     PTVTLSSVFGVAPSRSGFTPNDTSSWEAGADDGVLIGMSMSVSPAEYLYGAARGPALD
                     EVPAANSVAAALAAAVSCTDVAAALVAHGQSKSNSTKGCDASCTEQLCVNALHTLMDA
                     ATASDAGPSTLDIALTASGSVGDDAELTGFSGNWLGRWSLPGGSANVSGPASGAAPKP
                     VVP"
BASE COUNT         1134 a         2709 c         2726 g         1351 t
ORIGIN      
        1 gcttgcagat gtcgatcgtg cgttcgacca aatcggcgct gagctcttcg aggatgtttc
       61 gtgagagcgc gcgctggagg tggagcgctt cgtttctgcc gctcgagatg atgaagggga
      121 ggttgatctc cgtttctcgt acgcccgaca gctcacactt ggctttttca gccgcatccc
      181 gcaagcgctg cagggccatg cggtcctgac gcaaatcgat cccgtgctcg tcctgaaaac
      241 ccgacactag ccaatcgatg atgcgggcat cgaaatcttc accgcccaag aaggtgtcgc
      301 ccgtggtgct gatcaccttg aatacgccgt gggcaccgat ctccaaaatg ctgatgtcga
      361 acgtgccgcc gccgaggtcg tagaccgcga ccgtgcggtc catgtccttg ccgtagccgt
      421 aggcgagcga ggccgcagtg ggctcgttga tgatgcggat cacgtcgagc ccggcgatgg
      481 cgcccgcgtc tttggtcgcc tgccgttggt tgtcgttgaa gtaggcgggc accgtgacca
      541 cggccttctt cacgggctcg ccgaggtagt cctccgcgat gaccttcatc tcctgcaaga
      601 ccatcgagct gacctcgggg acggagtagg tcttgtcgcg cagccgaatc cgcacgtcgt
      661 tgtgcggccc ctccacgatc gtgtagctcg aggtcatgat cgagtttttg acctgcggcg
      721 agttccactt gcggccgatc aagcgcttgg ctgcgtagac ggtattctcc gcgttcgtga
      781 tggcctgccg cttggcgatg tggccgacga gacgtttgcc cgcttcggtg accgcgacga
      841 cgctcggtgt cgtcttgtaa cccccgcggt tggtgatgac gatcggcaca tcgccttcca
      901 gaatggagac gcaagagttg gtcgtcccca aatcgatgcc gatgactcgc tccatcgctt
      961 cttctttcgt ctaacctgga cccggcgtcc gcttcacgcc tcgcccttgc gggcacgccg
     1021 taaccagtcc ttgatggtat catccttggg cgcgagttgc tgtgcgcgct cgaactcggc
     1081 cgccgcgctc tgtttcatgc cggcctcgaa gtaaatcttg ccgagcgtga ggcgaagatt
     1141 ggggtcgtcg ggcgcggcgt cgcgggcgcg cttagcgaag tccgcggcct cgcgcagatc
     1201 gcccttggcg ctgtacaggc agtgggcaat gcgctcgagc acgtgcggcg tcggcttgcc
     1261 acggctcgcg cgccggtacg acgctgccgc ctcgagaaag cgcccttcgc gctcctcgta
     1321 ctgggcctgc tcgacgtagc tgtccgcgag ccccgcgacg acacgcgcct cgagatcgcg
     1381 cagccggccc gagagggcgg cgtcgtcggg cgcaagtgac gtcgcgatcc gcagcgcgtt
     1441 cgtggcggaa accagatccc tgcggctctc cgcctcttcg gacgccgaga cgtagcgttg
     1501 cacctggcgc gacttgagct cgaccacgcg ctcttcgtag cggcgcttca gatccgccgt
     1561 cgcggcttcc cgcgcggaga agtccgtctg cggcaacggc gagctcggca cgcgcgcagg
     1621 cggcggcagc gacacgccga gcttgcgagc gagcgcgcgt cgccgtgcgt cgacgtcggc
     1681 gggtcggaac gagtgattgg cgctcacggg cggcggcgtc ggcgtcgcga tactccgctg
     1741 tgtgaatggc ggcgccgagg gcaccggcgc gggggctgga tacgagtggc gccgcttttc
     1801 ctcgagctga acctgctcct ggatttcgcg cttgagccgt tcgacctcgc cggccgccac
     1861 gttcgcgtcg gtgagcgatc gatcgagcgc tcgcgtcctc tgcacggacg acaggtactt
     1921 gtcgtactcc tcgcgcgcgg cttgacgcgt gagcacgtcg tgggcttcgg tcacgcgcgc
     1981 gaacagccgc tcgagcttcg gcttgaagga cccgaggttt ttgccgaaat aacgatcggg
     2041 gtggaaagcg ttgacgagct cgaagtaggc ggccttgatg gctttcttgt cggcgctctg
     2101 ttcgatggcc aagagctcgt aatgagacag cgtgctcaag cgatagtagg tgtcgagcac
     2161 cttgcgtcgc cgttccttgt cgagatcgac gggttcgtcg agctctgcgg gatcgtagag
     2221 cgccgccgcg ggacggtgag ctttcggcgt cgcggcctgt tcgatcacgg cgcccacgtg
     2281 gatcttgaag gtccccgatg gcgagatcga gttcgagccc gacggtcgcg gagtacgcgg
     2341 cgcggggttc gagctcgaca cggcgagcgc gccgagtccg ttcagctttt cgagcgagcg
     2401 ccggatgacg tgcgcgtcga gtcccgtcgc gagggcgatg tcgctctcgc tggccgtgcc
     2461 gtcgaggtgc gagagcacga acgcatcctc gggcgtgagc ggtagtgcac gcagatcgac
     2521 gccgtctgcg agccgaagcc ggcgatcttt gtcgagcaag gccacccgtg cgaagtctac
     2581 ctgcctccgc ttgccgtcgc caaggcgcgc gtctgcacca catgctgcta catgcaccga
     2641 gcggtcgctc gctacggctt cgacacgacc tgctcgatga ctgcagcctg aatgcgcatc
     2701 gcttcttgga aggccgcgag cgcgcgctcc tccgccgccc gggcgcccgc tgcgtccccc
     2761 gcggctgtga gcgctttgct ccggcgttcc tcgaccaggc cgcgcacttc catcaaatga
     2821 ccgcgaaaat agctgcgctc gtggaccaag gtaagacctt ggtccacatc cgccgccgcc
     2881 gcgtcgaacg caccgtgccg gctccggagc tcggcgaggc gcgcgcgcgt gtccgccaac
     2941 acctcgcgca cctcggcggc attcgggcac ggcggcttcg gcccgctgac cacggcggag
     3001 agctcggctt cggcagccgc gagatccttc tgttcttcgc gcgcgtcggc gcggtggtgg
     3061 gccgcgcgcg aacggctgag gaacgcgagc aaggccgtcc cgacggcacg gccttgctca
     3121 ccggcgcaca cgtcagtggg gcggccgctg caagcaacga gcgcgagcgc gcaggcaagc
     3181 aagctcgagc tctgccgcat cagcggactc cccagagcgc gtaacgattt tcgcgtgcgt
     3241 cgcgtgcgcg cgcttcggcg atgcgatcga tacgctcgct cgtgcggttc ggatcgaagg
     3301 gctcgcgaaa gagatcttgc gtcgtgcgcg agcgcgcgag cgccggcagg gcttcgtgtg
     3361 cgggattacg cgcgcgtgcg acgaacaacg caaaggcggc cgcgacggcg agtccgaacg
     3421 cgccgaacgt gacgaacacg acgttcggct tgcgccgagc acgtctcgaa agctccagcg
     3481 ccgtcgcacg cccgagcggc gtggggttca cggcggcggc gagggcgcgc gcgagcgcgg
     3541 cgtccggatg actcacgtcg cggtcctcga gcgcgtggcg caaacgcgcg ctctcgcgga
     3601 gctcgtctgc gctagcgggc gcgaacggat cgtcgagcgc ggcccgcagg atctcggcgt
     3661 gccgctcggg cgcgagctcg gtcggaacgt aggccgcacg cagtgctcgc gcgagcacgg
     3721 cttcttcggc gggtgcgagc ggagttgcgc cgtcgtcagg gaattcgggc gtttccggcg
     3781 tcgtcacgga tcccgctcct ctgcgtcgag cactttgcgc agggccgcca tcgcgcgatg
     3841 gagtaccacg tcgaacgtgc ccacggagac gccgagcttc tcggcggctt cggcgcgcgg
     3901 ccgctcttcg agcacgcgca gccgaatcgc ctcggcgtag cgcgggtgca gccgctcgag
     3961 cagcgcgacc acacgcgcct tcgccgcgcc gaggtcgtgt gcctcgagct cggccgcgtc
     4021 gcgcgtctcg cgctcggcct ggtcgagctc acgctccaga tcggccgcgt cgaagagcac
     4081 ctcgcggcgc cgcgccctga gctgatcgag cgcaatgcgc agcgcgacca cgcgcagcca
     4141 cgggtagatg cccacgctct gccactcgaa tcttccgatg cgctcgacga cccgcaagta
     4201 ggtgagcgac agcgcctcct cggcgagggc gggattgccg aggcgtggca agagcacggc
     4261 gcggtagagc cgcgggccgt ggcgctcgag caggctcccg agtgccgtac ggtcgccggc
     4321 gcaggcccgc tcgcagagcc cgcgttcggt ctcgagctcc tcgggcgcca gcaccgcccg
     4381 gactctactc ggaggcccgg gtccgaccca actcgctcgc gtgcccacgc ccgtgcgcca
     4441 aaaggcgttg agcaggccct cagggcccgc gagggggagt gcgccgagct gcataccgag
     4501 ggaacgcacg gcggcggccc gcgcttacaa ccttcacgct ttcggcgggc accggtggta
     4561 gacacggcgc cccttcatgg ccgcgcgact atgcccctac tgcaaagagc tcaacagcgt
     4621 cggcgaacgc cgctgttatc gctgcgggcg ccggctgccg ggaccggccg cggacggcgc
     4681 gctgcgggtc gtgcagcagg tgctcggcgt cgaggcgccc gtgacgcgca tcctgctctt
     4741 tctcgagctg gccgtgttcg cgctgtgcgt catcgtcgag cacaccatcc cagacgggat
     4801 cggcttcttc gggttcttgg gtctgaagcc ggccttcagc gcctcgacgc tgctccgctt
     4861 cggcgcgctc gggggcacgc tcgggcatac ggagccgtgg cgctatctgt ccgcggtgtt
     4921 cgtccacgcc ggcgccctcc acgtcggcat gaacctctgg atcttcacga gcctcggcta
     4981 tgcgctcgaa cgcgagctcg gcggcgcccg ctttgcgctc ctcttcctgc tttcgggcgc
     5041 gctcgggttc gttgcgagca gctattggta cgcgccggtc gagccgctca cgatgggcgc
     5101 gagcggcggc gtgttcggcc agatcggcgc ctgggtcggt atcctcggcg cgcgccgcga
     5161 tccggagtgg aagaacgtgt tcgtgcgtaa tctgatctac gccgtgctct tgtcgttggc
     5221 gctcgggaac gtgaacacac ccgcccacct cggcggcttc gcggccggta tcgcgctggg
     5281 cttccttttt ggccgggaaa agccgagttg gcgactcgag tggccgctgc gcctactcgc
     5341 ggccgtaggg ctctgtgcgg tcgttgcttc ggtcggactt tcgatgcgct cgccgatctg
     5401 gcaggtcgtc cacctgcagg agtcccgcta cgagtagtat cgtcgggtag gcatgcccgt
     5461 cgttaatccc ttgtcccggg aggtggtgtt caaggtcgtc tattacggcc ctgggctcgg
     5521 cgggaagacg acgagccttc agcacattca cgcgacgacg cgcgccgagc accgcggcaa
     5581 gatggtgagt ctcgccacgc ccgtcgatcg cacgctctac ttcgattttt tgccgatacg
     5641 cctgccgagc gtgcacggca tgggcgtgcg cctgcagctc ttcacggtgc cgggccaggt
     5701 ctactacaac gcgacgcgca agctcgtgct cacgggcgcc gacggcctcg tgctcgtgtt
     5761 cgactcacag agcgatcgcc tcgatgcgaa ctccgagagc ctcgagaact tgaacgagaa
     5821 cctcatggcg cacggccgct cgctcggaca agtgccgcac gtgattcaat acaacaagcg
     5881 cgatctcgcg acggcgctct cgctcgacga gctcgagcga caattcaacc ggcatctcgc
     5941 gccctcgttc ggctccgtcg ccatgacggg cgagggcgtc tacgaagccc tcgaagcggt
     6001 gacgcgcgcc gtgctcgaac acttcgaaca gcgcatgcca ggcgaacgcc cggactcgat
     6061 gccggccctc gacatccccg aaggcggact cgccgatgcg ctgcgcggcg cgggctcgga
     6121 cgccgacgat gtgcacgagt cggcgcggct cgcggcagtg gagctgcggt tatcgcaagt
     6181 ccccgagcag gaccctggcg aagccgccgc gcgcttggcg gtcggtgagg ccttgcacga
     6241 acccgagccc gaacacgagg aggcggcgct cccggagtcc gcgccgccgg tagcggtcga
     6301 gcgagccgtg ccgccggcac ccgcgttctc gtcgccacgc gggcgcgcga gcttcgatct
     6361 gttgtggccg cccaccgagc gcggcatcgt gcgcgagctc gaagcgtgcc tggcagatgg
     6421 cgactacagc cgcgccgtcg ccggcagcga ggcgctcgtg gcccgttcgc ttgcgggagc
     6481 cgcggccgcg ctcggtccga acgacgcgcc gcgcgacgcc gccaccgtcg ccgtcgtgct
     6541 cgggatcgac gggaggcgtt acctcgaatt tcggagtctc gcgcgggaag cgcgcgcggg
     6601 ccgcggcatt tcggccaccg aagcgctcgt cgcgtacgcg ctggcgatcg agatccgcat
     6661 cgcgcgtgcg ggcgtcgccg gctgagcgcc ggctagatcg caccttcgcg atgccgcgcg
     6721 cgccgtgccg ctcacggcac gaccggtttg ggtgcggcgc cgctcgccgg tccgctcacg
     6781 ttggcgctgc cgcccgggag cgaccaacgt ccgagccaat tgccgctgaa gcccgtgagc
     6841 tcggcgtcgt cgccgacgct gccggacgcc gtgagtgcga tgtcgagcgt cgaggggccc
     6901 gcgtcggacg ccgtcgcggc gtccatcaac gtgtgcaacg cgttcacgca gagctgctcc
     6961 gtgcagctgg cgtcgcaacc tttcgtcgag ttgctcttgc tttgcccgtg cgcgacgagc
     7021 gccgcggcaa cgtccgtaca cgaaaccgcg gcagcaagcg ccgcggcgac gctgttcgcc
     7081 gcgggcacct cgtcgagcgc cggcccgcgc gccgcgccgt acagatattc tgcgggcgat
     7141 acggacatac tcatgccgat gagcacgccg tcgtcggcgc cggcttccca actcgacgtg
     7201 tcgttcggcg tgaagcccga acgggacggc gcgacaccga agacggagct caacgttacg
     7261 gtcggaggtc cgcccggcgt gccgcgcagc gtgcccgtga gcccacccaa gacgtgttct
     7321 tcgtcgagcg cgcgtgcgat ccagcgcgcg agcggtgcgc gcacggcgct cgtagcggat
     7381 gcgccgagct tttcacgcac gacggcgtcc caatcgagac tcgtgcgagc gtcggcgaag
     7441 gtcttcgtcg aactcgcgtt ctctgacatc gcgtcgagca acgccgccgt gtcgtcgtcc
     7501 gcgtcgcgga gcacggcagc gagcattgcc tgttgcggct ccgccagcgc agcgtcgaac
     7561 gcatccgggc tgtcgagccc gagcgtgaaa tcgaccacgc tggcgtcgag tgtcatcggc
     7621 acgttcgtca tcacgacttc gacgtcgttc tgcgcgccct cggtcgccga gttcacggtc
     7681 gtgcaccccc aggcaaaacg cgcggcgcgc agcgtgaccg cgagcttcgt gtcggtgggc
     7741 accagcaacg gaacgggaaa cttgtcgcgg ctcgccacga gcggcccgtc ctcgtcgggc
     7801 gggctacccg gcagatcggc gcacgtcgtg tcttgccacg cgctcgcgac gtagccttgg
     7861 agcacggcgc gttcgcccgc gtacgacggt cggacgccga gcaatgccat gctcgtcttc
//
LOCUS       DATIML010001149         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5154267, whole genome shotgun sequence.
ACCESSION   DATIML010001149 DATIML010000000
VERSION     DATIML010001149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5154267"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VLJ38_19850"
     CDS             <1..677
                     /locus_tag="VLJ38_19850"
                     /inference="COORDINATES: protein motif:HMM:NF021576.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2306 domain-containing protein"
                     /protein_id="HSU41848.1"
                     /translation="PYFDFETLPPFVIEKLPVKFEALWLASLRVHVGSASLAFPLCLA
                     LMTRSLQRRPRWHRWAGRFTGVLVLGALVPSGVVLAFDAKGGLLGTAGFLLSAAIVAS
                     AVVYGVAAARRHDFATHRRAMRHVVGQMSVAVSSRALILALDGAGLNPDSAYVLALWG
                     PVVATALVVELASRPSLLARSQSSLRRSTPFSRLALSKGISREISPVAALLPVRSHSG
                     LRRCGR"
     gene            721..1035
                     /locus_tag="VLJ38_19855"
     CDS             721..1035
                     /locus_tag="VLJ38_19855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41849.1"
                     /translation="MKPLTKREGGSRFSRERPPPRERRVRVLESTLSRDKNGRSFVAF
                     AIDVRFGSDWQQNDITGCAYRESGNLFVKIGDAYRPATFLLGKNVAPVAGACEAAPPP
                     SS"
     gene            complement(1065..>1961)
                     /locus_tag="VLJ38_19860"
     CDS             complement(1065..>1961)
                     /locus_tag="VLJ38_19860"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSU41850.1"
                     /translation="RTCNNACSMQWDDLRVFLAVHRLGSHQRAARQLRVDPTTVARRL
                     AALESALGTRLLARTPDRVELTPAGLELLPRAERIETEALAAERALAAADDRLEGSVR
                     VTATDGVVHYLLLPALGAFRCEHPQVTLELRIETRVLDLSRREADVAVRLARPKQPAL
                     VARRLGSLRWSLFASEAYLERRGTPRSLGALAGHDFVGYDAALDLPETRWLERAVREP
                     RYVVRATSTTAQALACAEGHGIALLPSFVAPREPHLRRLLPRLVGPEREAWGVLHSDL
                     KTNARASAFLSFLARLVLDVSS"
BASE COUNT          280 a          681 c          675 g          325 t
ORIGIN      
        1 tgccgtactt cgatttcgaa acgctgcccc cgttcgtgat cgagaaattg cccgtgaagt
       61 tcgaggcctt gtggctcgct tcgctccggg tgcacgtcgg cagcgcctcg ctcgcgttcc
      121 cgctctgcct cgcgctcatg acgcgttcgc tgcaacggcg accgcgctgg catcgctggg
      181 ccggccgctt cacgggcgtg ttggtgctcg gcgcgctcgt gccgtcgggc gtcgtgctcg
      241 cgttcgacgc gaagggcggc ttgctcggga ccgcgggatt tctgttgtcg gcggcgatcg
      301 tcgcgagcgc ggtcgtgtac ggcgtcgcgg cggcgcgccg gcatgatttc gcgacgcacc
      361 ggcgcgcgat gcggcacgtg gtcggacaga tgagcgtcgc cgtgagctcg cgcgcgctca
      421 tcctcgccct cgacggcgcc gggctgaacc ccgactctgc ctacgtgctc gcgctctggg
      481 ggcccgtggt cgcgaccgcg ctcgtcgtcg agctcgcctc acgaccgtcc ctgctcgcgc
      541 gctctcagtc gtcgctccgc cgctcgactc cgttctcccg cctcgcgctc tcgaaaggta
      601 tttctcgtga aatctcgcca gtggctgctc tgttgcccgt tcgttctcac tctggcctcc
      661 gtcgctgcgg ccgatgacgc gctcgtcagc tgggcagaac atcggatcga cgaaggcatc
      721 gtgaagccac tcaccaaacg cgaaggtggc agtcgctttt cgcgcgagcg cccgccgccg
      781 cgtgaacgcc gcgtgcgcgt actcgagtcc acactgagcc gggacaagaa cggccgctcg
      841 ttcgtcgcct tcgccatcga cgtgcgcttc gggtcggact ggcagcaaaa tgacatcacc
      901 ggttgcgctt atcgcgagag cggcaatctg ttcgtcaaga tcggcgatgc ttaccggcca
      961 gcgacgttcc tgctcgggaa gaatgtcgcc cccgtcgccg gtgcgtgcga agcggcgccg
     1021 ccgccctcga gttgatcccc cgtgaatcaa ggcgctatgt cgtctcagct cgaaacgtcg
     1081 agcacgagtc gagcgagaaa gctcaagaaa gcagacgcgc gtgcgttcgt cttgagatcc
     1141 gagtggagca cgccccacgc ctcacgctcc ggacccacga ggcgcggaag caagcgcctc
     1201 aagtgcggct cgcgcggcgc gacgaacgac ggcaacaggg cgatgccgtg cccttccgcg
     1261 cacgccaggg cttgcgccgt ggtgctagtg gcccgcacga cgtaacgtgg ctcgcgtacc
     1321 gcgcgctcga gccagcgcgt ctcgggcaag tcgagcgcgg cgtcgtagcc gacgaagtcg
     1381 tgaccggcga gtgctccgag actgcgcggc gtgccgcggc gctcgaggta cgcttcgctc
     1441 gcgaacagcg accagcgcag ggaaccgagc cgccgcgcga cgagcgcggg ttgcttcggc
     1501 cgcgcgagcc gcacggcgac gtcggcttcg cggcgagaca aatcgaggac gcgcgtctcg
     1561 attcggagct cgagcgtgac ctgcggatgc tcgcacctga acgcgccgag cgcgggtaaa
     1621 agcaggtaat gcacgacgcc gtccgtcgcc gtcacgcgca ccgagccctc gagtcggtcg
     1681 tccgcggcgg caagcgcacg ttcggcggcg agcgcctccg tttcgatgcg ttcggcgcgc
     1741 ggcaagagct ccaggccggc gggggtgagc tcgacgcgat ccggcgtgcg cgcgagcaag
     1801 cgcgtgccga gcgcgctctc gagcgccgct aggcgtcgcg cgacggtggt cggatcgacg
     1861 cgcagctggc gcgccgcgcg ctggtggctc ccgaggcggt gcacggcgag aaacacccgc
     1921 aaatcgtccc actgcatgct gcacgcatta ttgcaggttc g
//
LOCUS       DATIML010001150         3523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4283223, whole genome shotgun sequence.
ACCESSION   DATIML010001150 DATIML010000000
VERSION     DATIML010001150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3523
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4283223"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VLJ38_19865"
     CDS             complement(<1..224)
                     /locus_tag="VLJ38_19865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41851.1"
                     /translation="MNRARSSLAALLLASACASHAPPPPAAPPAPPPEADASGTAAQP
                     GAGMSDKPTSESASKRPAMNASAQQAYNAG"
     gene            complement(221..>3523)
                     /locus_tag="VLJ38_19870"
     CDS             complement(221..>3523)
                     /locus_tag="VLJ38_19870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41852.1"
                     /translation="KGKLAKTGKASKDTEELRFVDPYEGCTPVPQKTAPGEDPRYVAE
                     IWWQLGNYHFDQIDPRGGPYNLNRAVSAYDHSLEYKKPPIYGVALYKLAWSYFKEQRY
                     HAAVDEFVHLLHYADEQEAKTGDPGADFRAEAYTYIAGSLTYVDFTGPRPDDPYVPRS
                     DVLDTETDPLVAEQKMAIAIDRVQDPKLIPQDQKWTVEIYKSLSQEFIEITQNRNAVA
                     MLELTLRKFPLNRDAPVMQNKVAELYDELSRLAPDGSAAKAEYGAKALEARTRLSAYV
                     GANTPWVEANKDDPEALQTAETLVRGGLKKAAADHTNFARGYYQRATELSNESEQRGL
                     LEKAIGEYRLADSAWAGYLEQDPTAVDAYESRFWLADARYWVVVLQVTLERSPAPEEV
                     TRAREAAVDVRDSNEDDKYLQPSAYYVVTLADKVLEDEQRKYQQSGGKQGIEKLEKVK
                     QTGEGEHATVVRQELPPAVLATVKARDEYNDRIPLDRDPQKNGLLYAFQAADQYFLYG
                     QFDQARARFKPIYDQRCGKDEWGYKAWEKLISMAALENDAEQSRKLAEGKSCAVNEET
                     RAAEENLRKPVRQGVAYLDARKLFDEAEKMPEGPERSKKWRQAAAAYKVALDAAPDRD
                     EAPEAAMNGAYAYKQVGEYDKAIEMYELFISRYGSEASLDKLQKGDPKANPPVAANPE
                     KYETRVKYLKSADDALAGSYVLFFNYPKAADTFDKISSNGRFKEAERREAAKQALSLY
                     SSLGDQSGMARARGNFEKLGASPKEVAEADFTVASAALKKWDRYSPDTGANANARKAA
                     QRAMDDYYDANKNREPAAQYVVQAAYWSAVTRQVVQQNDPNKWWQNCIGAFDRWQRIA
                     PREGGKNSALGSPEAKMAAEGEYTMLDEQIENQFDYETGHHRYKGTTVEVIKQYTADA
                     GVAKSWFDKLQHVADAYVSPEWTIAAISRQGSLYDSLRTGLYNVRPPALNMFDAKTEK
                     LLKRAENSDDPDLQAKADEVRVSVQQAWRTKRDQELDSADKIMIDRYSTSIVLAKRYN
                     VSNPAVVRAIRRLAFATDVIGEAKMKQFTAGVKDLNYSEGMFQRMRPGQVSTPAPVGM
                     PEPLPVAVGGAP"
BASE COUNT          460 a         1162 c         1166 g          735 t
ORIGIN      
        1 attccggcgt tgtaggcctg ctgcgccgac gcgttcatcg cgggacgctt cgacgcgctt
       61 tcgctcgtcg gcttgtcgga catgccggca cccggctgag ccgcggttcc gctcgcgtcc
      121 gcttcgggcg gaggggccgg cggtgccgcg ggcggaggcg gcgcgtggct cgcgcaggcg
      181 ctggctagca gcaaagcggc gaggctcgag cgggcgcggt tcacggcgca cctccgacgg
      241 cgaccggcag tggctcgggc atgccgaccg gcgccggtgt cgagacctgc cccggacgca
      301 tgcgctggaa catgccctcg ctgtagttca agtccttcac gccggccgtg aactgcttca
      361 tcttcgcctc gccgatcacg tcggtcgcga acgcgagccg gcgaatcgcg cgcacgacgg
      421 cggggttcga tacgttgtaa cgcttcgcga ggacgatgct cgtcgagtag cggtcgatca
      481 tgatcttgtc cgcgctgtcg agctcctggt cgcgcttggt gcgccaggcc tgctgcacgc
      541 tcacgcgcac ctcgtccgcc ttggcctgca gatcgggatc atcgctgttc tccgcgcgct
      601 tcaggagctt ctccgtcttc gcgtcgaaca tgttcaaggc gggaggacgc acgttgtaga
      661 ggccggtgcg cagcgagtca tacagcgagc cctggcgcga gatggccgcg atggtccact
      721 cgggcgagac gtaagcgtcg gcgacgtgct ggagcttgtc gaaccagctc ttcgcgacgc
      781 cggcgtcggc cgtgtactgc ttgatgacct cgacggtcgt gcccttgtag cggtgatggc
      841 cggtctcgta atcgaactga ttttcgatct gctcgtcgag catggtgtac tcgccctcgg
      901 ccgccatctt ggcttccggt gagccgagcg cgctgttctt gccgccctcg cgcggcgcga
      961 tgcgctgcca gcgatcgaac gccccgatgc agttttgcca ccacttgttg ggatcgttct
     1021 gctgcacgac ctggcgcgtg acggccgacc aataagcggc ctgcaccacg tactgcgccg
     1081 cgggctcgcg gttcttgttc gcgtcgtaat aatcgtccat cgcgcgctga gcggccttgc
     1141 gcgcattcgc gttcgccccc gtgtcggggc tgtagcgatc ccacttcttg agcgccgccg
     1201 acgcgacggt gaagtcggct tccgccactt ctttggggga ggcgccgagc ttctcgaaat
     1261 ttccgcgcgc gcgcgccatg cccgactgat cgccgaggct cgaatacagg ctcaacgcct
     1321 gcttggccgc ttcgcgccgc tcggcttctt tgaagcgacc gttgctgctg atcttgtcga
     1381 aggtgtcggc cgccttcggg tagttgaaga acagcacgta cgagcccgcg agcgcgtcgt
     1441 ccgcgctctt caggtatttg acgcgcgtct cgtacttttc cgggttcgcg gcgaccggcg
     1501 ggttcgcctt cggatcgccc ttctgcagct tgtcgagcga cgcctcgctc ccgtaacgcg
     1561 agatgaagag ctcgtacatc tcgatcgcct tgtcgtactc gccgacctgc ttgtaggcgt
     1621 acgcgccgtt catcgcggcc tcgggcgcct cgtcgcgatc gggagcggcg tcgagcgcca
     1681 ccttgtaagc cgcggcggcc tggcgccact tcttcgagcg ctccggtccc tccggcatct
     1741 tctccgcttc gtcgaagagc ttgcgcgcat cgaggtacgc gacgccctgg cgcacgggct
     1801 tcctcagatt ttcctccgcc gcgcgcgtct cctcgttgac ggcgcagctc ttgccctcgg
     1861 cgagcttgcg gctctgttcg gcgtcgttct cgagcgccgc catgctgatg agcttttccc
     1921 aggccttgta gccccactcg tctttgccgc agcgctgatc gtagatcggc ttgaagcgag
     1981 cccgcgcctg gtcgaactgc ccgtacagga agtactgatc ggcggcctga aacgcgtaca
     2041 ataggccgtt tttctgcgga tcgcggtcga gcgggatgcg atcgttgtac tcgtcgcgtg
     2101 ccttgacggt cgcgagcacg gcgggcggta gctcctggcg cacgacggtc gcgtgttcgc
     2161 cctcgcccgt ctgcttcacc ttttcgagct tctcgatgcc ttgcttgccg ccggactgct
     2221 gatacttgcg ctgctcgtcc tcgagcacct tgtcggcgag cgtcacgacg taataggcgg
     2281 acggctgcag gtacttgtcg tcctcgttcg agtcgcgcac gtccaccgcg gcttcgcgag
     2341 cgcgcgtgac ctcttcgggc gcgggcgagc gttccagcgt gacctggagc accacgaccc
     2401 agtaacgcgc gtccgccagc cagaagcgac tctcgtacgc gtcgacggcg gtcggatcct
     2461 gctcgaggta gccggcccac gccgagtccg cgagccggta ctcgccgatg gccttttcga
     2521 gcagcccgcg ctgctcgctt tcgttactga gctcggtcgc acgctgatag tagccgcgcg
     2581 cgaaattcgt gtgatcggcg gcggccttct tgagcccgcc acggacgagc gtctccgccg
     2641 tctgcagcgc ttcgggatcg tccttgttcg cttcgaccca gggcgtgttc gcgccgacgt
     2701 acgccgacag acgcgtgcgc gcctcgagcg ccttggcgcc gtactcggcc ttggcggcgg
     2761 agccgtccgg tgcgagccgc gagagctcgt catagagctc ggcgaccttg ttctgcatga
     2821 ccggcgcgtc gcgattgagc gggaacttcc gcagcgtgag ctcgagcatc gcgaccgcgt
     2881 tgcggttctg cgtgatctcg atgaattcct gcgagagcga cttgtagatc tcgaccgtcc
     2941 acttttggtc ctgcgggatg agcttcggat cctggacacg gtcgatcgcg atcgccattt
     3001 tttgctcggc gacgagcgga tcggtttcag tgtcgaggac gtcgctgcgt ggaacgtagg
     3061 gatcgtccgg gcgtgggccc gtgaaatcga cgtacgtgag cgagccggcg atgtacgtgt
     3121 acgcctcggc gcggaagtcg gcgcccgggt cgcccgtctt ggcctcctgc tcgtcggcgt
     3181 agtgcaagag atgcacgaac tcgtcgacgg cggcgtggta gcgctgctct ttgaagtagc
     3241 tccacgcgag tttgtagagc gcgaccccgt agatgggcgg cttcttgtac tcgagcgagt
     3301 ggtcgtacgc gctcacggcg cggttcaggt tgtaggggcc gccacgcgga tcgatttggt
     3361 cgaaatggta gttaccgagc tgccaccaga tttccgcgac gtagcgcggg tcctcgccgg
     3421 gcgccgtctt ctgcggcacc ggcgtgcaac cttcgtacgg gtcgacgaag cgcagctcct
     3481 ccgtgtcctt cgacgctttg ccggtcttgg cgagcttgcc ctt
//
LOCUS       DATIML010001151         5217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3416083, whole genome shotgun sequence.
ACCESSION   DATIML010001151 DATIML010000000
VERSION     DATIML010001151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5217
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3416083"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1244
                     /locus_tag="VLJ38_19875"
     CDS             <1..1244
                     /locus_tag="VLJ38_19875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41853.1"
                     /translation="KELPLGTEHRPGARFVQSEDIPEAGAHGCTTNGSARLVTHDPAR
                     AETLAARLAAALCFGSALALMYLTARRFETVSERQALGLTALFGFCSLQLPTHVSGLA
                     SHGAAVPFVLAALFALTSPRVQGPAVAGLLLVAAYVMRPTAGVLLPLVASWLWFERRR
                     ALWGFIAAVLVLGAGVAWMNMSLYGHAVPPYNRVTRLVLAGLPVGLLGNLVSPSRGLL
                     WYCPWCLVSAVGGALALSRRGVPSFFRLLASAFVVHLAVVSCFPQWWAGWCYGPRFLA
                     EMMPELVLLLIPALAVLKLASARLRRNATRAFAATIGYSFLVAILGTTHSGGYWNEHP
                     NNVDRHPEHLWTVIQNTCGMSQIPKSCGRCASLSPPASPVERCARVGDGARVVRCVDL
                     YAASMPKTRRYARRTFSVTSR"
     gene            complement(1178..4072)
                     /gene="glnE"
                     /locus_tag="VLJ38_19880"
     CDS             complement(1178..4072)
                     /gene="glnE"
                     /locus_tag="VLJ38_19880"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: protein motif:HMM:NF008292.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HSU41854.1"
                     /translation="MTAFEDLGALAAAIDGDRAARLARELGPRPLAVLLGVAFPPLTP
                     QAGWQIDAIDAIAKRGWRTERRAAQLARLFPALRDDEPTDGEARARALRRTGWAEKAR
                     IALRELLPAELGGAEIESTSRELSRLADALLERALGQAEAEVEERYGAPRQKNGERSR
                     VVVFGLGKLGGLELNAGSDIDLLFVYDTDEGGSSVSLHEHWTHVVRRAVDLIGTPSAD
                     GLLFRVDLRLRPEGSQGALVNSIEAVERYYERWGRLWERAALLRARSAAGDLALGALF
                     ERDIVTPFVYRRDVDPGIGESLTDLLVRSRAELSPDPKRDLKLGRGGIREAEFFVQTL
                     QLVWGGREPSLRVQGTLPALGRLRSRGFVSDGEVSAIGESYALLRKLEHRVQWLSGIQ
                     THLLPSGDDFAHLARTMRLGESELTAAVERARATVHSLFSSLAPRRPQTPSPFEPIAT
                     ALANSDDAFDALAEAAYGDAEIAEHLRALGRRPDDLLGELTRDRYPDLARAVLEELAS
                     SPDPEQAARFLRAILTRFSSPEPYVAGLAQDRVALRRLVTALASSAFIGETALVRPEL
                     IDTILFGAGAISDPSAAVAVEIDAQLQGLAAGADLDEQRDALVRGLRVAKQRLMVEVA
                     TADLADTIGTRDATRLLSALADEELARAVDHVLGDHRGLSVIAMGKLGGREIGYGSDL
                     DVVFIYDPACAPEPDEAGAFYSRAAGRVIRLISEPHVAGPGYELDTRLRPSGSHGMLV
                     TSVAAFARYHSVPLPGAEHEPVTGSVGSSGAAWERQALLRARFAAGDPELGARAVEVA
                     QRAAYEGGAAPAAEVHHLRERMERELGRERPHRLDLKVGRGGLLDVEFAVQFLQMLNG
                     ADHAIRSPDTSVALEALALRGYLSVDDYDALRDGYAFLRRLEQRIHVLYGTGSSIIAV
                     RAPGLPALARRMGYRSAPGAPAEQALLAHYRDVTENVRRAYLRVFGIDAA"
     gene            4192..4827
                     /locus_tag="VLJ38_19885"
     CDS             4192..4827
                     /locus_tag="VLJ38_19885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HSU41855.1"
                     /translation="MRFLCVSDIHGHARALEAVIREADGFGWDQLVACGDLCFPGPEP
                     LAVWKILVEHRALCVQGIGDRALAQVDPSKLAAASPGERTRIERLKQVHAELGELIIA
                     RLGKLPAMARLPLESGHELLVVHGSPADPSEPLTFDMTDDEIIALLGDEPADIVVCGG
                     SHVAFERDVADVRIVNVGSVGEAPEGGVAHGAIIASSQTGFAVRMLSASLA"
     gene            complement(4829..>5217)
                     /locus_tag="VLJ38_19890"
     CDS             complement(4829..>5217)
                     /locus_tag="VLJ38_19890"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF012511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HSU41856.1"
                     /translation="RAGVAREGLSVIPLVAPTTGREREPRVLAGASGFVYYVSVTGVT
                     GSQKAPLGEAGQHAAALKARSGLPVVVGFGIRTPEQAREVADAGVDGIVVGTELVRVI
                     AEAKDRASRPKAVADFVGRLRRGLDA"
BASE COUNT          734 a         1763 c         1869 g          851 t
ORIGIN      
        1 gcaaggagct gccgctgggg accgaacaca ggcctggcgc tcggttcgtg caatccgagg
       61 acattcctga ggctggcgcg catggctgta cgacgaacgg ctcggctcgg ctcgtgacgc
      121 acgatcctgc ccgcgctgaa actctcgctg cgcgccttgc ggcggcactg tgcttcggga
      181 gtgcacttgc gctcatgtat ttgacggcgc gccgcttcga gacggtgagc gaacgccagg
      241 ccctcgggct gaccgcgctg ttcggcttct gctcgctcca gctgccgacg cacgtctcgg
      301 gcctcgcgtc acacggcgcc gccgtgccgt tcgtgctcgc ggcgctgttc gcgctcacga
      361 gtccgcgcgt ccaaggtccc gcagtggccg ggctcttgct ggttgctgcg tacgtcatgc
      421 ggccgacggc cggcgtgctg ctgccgctcg tcgcgagctg gctctggttc gagcgacggc
      481 gcgcgttgtg gggcttcatc gccgcggttc tggtcctcgg cgctggtgtt gcttggatga
      541 acatgtccct ctacgggcac gcggtgccgc cgtacaaccg cgtgacacgc ctcgtgctcg
      601 cgggccttcc cgttggcttg ttgggcaatt tggtgtcgcc gagccgtggg ctgctttggt
      661 attgcccctg gtgtctggtc tccgcagtgg gcggtgccct cgccttgagc cgccgaggcg
      721 ttccttcgtt ttttcgtttg ctcgccagcg cgttcgtcgt gcacctcgca gtggtctcgt
      781 gttttccgca gtggtgggcg ggttggtgct acgggccgcg gtttttggcc gaaatgatgc
      841 cggagctggt cctgctgctc attccggcgc tcgccgtgct gaagctcgct tccgcgcggc
      901 tccgtcgcaa cgcgacaaga gccttcgccg caacgatcgg ctactcgttt ttggtcgcaa
      961 tcctgggaac gactcacagc ggtggctact ggaacgaaca cccgaacaat gtggaccgtc
     1021 atccagaaca cttgtggacc gtcatccaga acacttgtgg gatgagtcag atccccaaat
     1081 cttgcgggcg ctgcgcgtcg ctctcaccgc ccgcaagccc agttgagcgg tgcgcacgag
     1141 tcggggacgg tgcgcgagtc gtacggtgcg ttgatcttta cgccgcgtcg atgccgaaga
     1201 cgcgcaggta tgcccgccgc acgttttcag ttacatcgcg atagtgggcg aggagggcct
     1261 gctctgcggg cgctccgggc gcgctcctgt aacccatgcg gcgcgcgagc gcggggagtc
     1321 ccggcgcgcg gacggcgatg atgctcgacc ccgtgccgta aaggacgtgg atgcgctgct
     1381 cgaggcggcg taaaaaggcg tagccgtcgc gcagcgcgtc gtagtcgtcg acgctcaaat
     1441 agccgcgcaa cgcgagcgct tcgagcgcga ccgacgtgtc gggcgagcga atcgcgtgat
     1501 cggcgccgtt gagcatctgc aggaactgca cggcgaattc gacgtcgagc agcccgccgc
     1561 gtccgacttt caagtctaac cggtgcgggc gctcgcgacc gagctcgcgc tccatgcgct
     1621 cgcgcaggtg gtgcacttcg gccgcaggcg cggcgccgcc ctcgtacgcg gcgcgctggg
     1681 cgacttctac cgcgcgcgcg ccgagctcgg ggtcgccggc tgcgaagcgc gcgcgcaaaa
     1741 gtgcctgtcg ctcccacgcg gcgccgctcg agccgacgct gccggtcacc ggctcgtgtt
     1801 cggccccggg cagcggcacg gagtggtaac gagcgaacgc cgccaccgac gtgacgagca
     1861 tgccgtgcga gcccgacggg cgaagacgcg tgtcgagctc gtagccgggg ccggcgacgt
     1921 gcggctctga aattagccgg atcacgcggc cggcagcgcg cgaatagaac gcgccggctt
     1981 cgtccggctc gggcgcgcag gcggggtcgt agatgaagac tacgtcgaga tccgacccgt
     2041 aaccgatttc gcggccgccg agcttgccca tcgcgatcac gctgagcccg cggtgatcgc
     2101 cgagcacgtg gtcgaccgcg cgggcgagct cttcgtcggc gagcgcggac agtagacgcg
     2161 tggcgtcgcg cgtgccgatg gtgtcggcga gatcggccgt cgcgacctcg accattagcc
     2221 gttgcttggc gactcgcaga ccacggacga gcgcgtcgcg ctgctcgtcg aggtcggcgc
     2281 cggcggcgag cccttgcagc tgagcgtcga tttcgacagc gaccgcggcg ctcggatcgc
     2341 tgatcgcgcc cgcgccgaac aggatggtgt cgatgagctc gggtcgaacg agcgccgttt
     2401 cgccgatgaa cgcgctcgag gcgagggccg tcacgagacg gcggagcgcc acgcggtcct
     2461 gcgcgagtcc ggcgacgtac ggctcgggcg aggaaaaacg cgtcagaatc gcgcgcaaaa
     2521 atcgcgccgc ttgttcggga tcgggtgagc tcgcgagctc ctcgagcacg gcgcgcgcaa
     2581 ggtcggggta gcgatcgcgc gtgagctcac cgagcaggtc gtccggtcta cggccgagcg
     2641 cgcgcaggtg ctcggcgatt tcggcgtcgc cgtaagctgc ttcggctagc gcgtcgaagg
     2701 cgtcgtcgct attcgccagt gccgtagcga tcggctcgaa cggcgaagga gtctgcggcc
     2761 ggcgcggagc gagcgagctg aagagcgaat gcacggtcgc gcgcgcgcgc tcgacggcgg
     2821 cggtgagctc cgactcgccg aggcgcatgg tgcgcgcgag gtgggcgaag tcgtcgccgc
     2881 tcggcaagag gtgcgtttga atgccgctca gccactgcac gcggtgctcg agcttgcgca
     2941 agagcgcgta ggattcaccg atcgcgctca cttcgccgtc gctcacgaag ccgcggctgc
     3001 gcaggcgccc gagcgcgggc aacgtgcctt gcacgcgcag gctcggctcg cgtccgcccc
     3061 agacgagctg cagcgtttgc acgaagaatt ccgcctcgcg aatgccgccg cgcccgagct
     3121 tcagatcgcg cttcggatcg ggcgagagtt cggcgcgcga gcggacgagc aggtccgtga
     3181 ggctctcgcc gatacccgga tcgacgtcgc gacgatagac gaacggcgtc acgatgtcgc
     3241 gctcgaagag agcgccgagc gcgaggtcgc ccgccgcgga gcgcgcgcgc aggagcgcag
     3301 cgcgttccca cagccgtccc cagcgttcat aatagcgctc gacggcttcg atcgagttca
     3361 cgagcgcacc ttgcgagcct tcggggcgca ggcgtaaatc gacgcggaag agcagcccgt
     3421 cggcgctcgg cgtgccgatg agatcgaccg cgcgccggac cacgtgtgtc caatgctcgt
     3481 gcaggctgac cgagctgccg ccctcgtccg tgtcgtaaac gaataaaagg tcgatgtcgg
     3541 aacctgcgtt gagctcgagg ccgccgagct tgccgagccc gaacacgacg acccgcgagc
     3601 gctcgccgtt tttctggcgt ggggcgccat accgctcttc gacttccgct tctgcttgac
     3661 cgagcgcgcg ctcgagtagg gcatcggcca gccggctgag ctcccgcgaa gtgctctcga
     3721 tttcggcgcc gccgagctcg gcgggcaaga gttctcgcag cgcaatgcgc gccttctcgg
     3781 cccaaccggt gcggcgtagc gccctggcgc gcgcttcccc gtcggtcggc tcgtcgtctc
     3841 ggagcgcggg gaagagccgc gcgagctgcg ctgcccggcg ttcggtgcgc cagccgcgct
     3901 tcgcgatcgc gtcgatggcg tcgatctgcc agccggcctg cggcgtgagc ggcgggaaag
     3961 cgacgccgag cagcaccgcg agcgggcgcg ggccgagttc gcgcgcgagc cgcgccgcgc
     4021 gatcgccgtc gatcgccgcc gcgagcgcgc cgaggtcctc gaatgcggtc acgtgcggag
     4081 catcgcacgc ccaggaaccg gcgggttttg ggggcgtggc agcgagcccc gttgcggtga
     4141 gccgccgtcc gcagtaacgg gcctcgtgcg cggtgtcgac gccgcgaatg catgcgtttc
     4201 ctgtgcgtct ccgacattca tgggcacgcc cgcgcgctcg aggccgtgat ccgcgaagca
     4261 gacggcttcg gctgggatca gctcgtcgcg tgcggcgatc tgtgtttccc cgggcccgag
     4321 ccgctcgcgg tttggaaaat cctggtcgag catcgtgcgc tctgcgtgca gggcatcggc
     4381 gatcgcgccc tggcgcaggt cgatccgagc aagctcgccg ccgcgagtcc cggcgagcgc
     4441 acgcgcatcg agcggctgaa gcaggttcac gccgagctcg gtgagctcat catcgcgcgg
     4501 ctcggcaagt tgcccgccat ggcgcggctg ccgctcgagt cggggcacga gttgctcgtc
     4561 gtgcacggct cacccgccga tccgagcgag ccgctgacgt tcgacatgac ggacgacgag
     4621 atcatcgcgc tgctcggcga cgaaccggcg gacatcgtcg tttgcggcgg cagccacgtg
     4681 gcgttcgagc gcgatgtcgc ggacgtgcgc atcgtcaacg tcggctcggt cggcgaagca
     4741 cccgagggcg gcgtcgcgca cggtgccatc atcgcgagct cgcagacggg cttcgccgtg
     4801 cgcatgctga gcgcgagtct cgcttagtct acgcgtcgag tccgcggcgc agtcgtccca
     4861 cgaagtcggc gacggccttg ggccgcgacg cgcgatcctt cgcctcggcg atgacgcgca
     4921 cgagctccgt gccgacgacg atgccgtcca cgccggcgtc ggcgacctca cgcgcttgct
     4981 cgggggtccg aatgccgaac ccgaccacga cggggagccc cgagcgcgct ttgagcgcgg
     5041 cggcgtgctg cccggcttca ccgagcggcg ccttttggct gccggtcacg cccgtgacgg
     5101 agacgtaata aacgaagccg ctcgcgcccg cgagcacgcg cggctcgcgc tcgcgcccgg
     5161 tcgtcggcgc cacgagcgga atcacggaca ggccttcgcg tgccacgccg gcgcgta
//
LOCUS       DATIML010001152         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1687793, whole genome shotgun sequence.
ACCESSION   DATIML010001152 DATIML010000000
VERSION     DATIML010001152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1687793"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1375)
                     /locus_tag="VLJ38_19895"
     CDS             complement(<1..1375)
                     /locus_tag="VLJ38_19895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU41857.1"
                     /translation="MRDGTHTQAGGTAVAARPAYDGEVSTTLDCVSSRSGGELRLQLL
                     ALEATGLALFSLPTDGSVSIGRGEECEIRLGDALVSRRHALLHVRPLSIQDAGSANGT
                     KLGAERLAPGAVASIEPGQAISVGQTLLIVRRAAAAVETLGEHAAKPDASESGIVVCD
                     PVMKKIFCTIERLAQGQINVLIVGETGVGKEVAAEAIHRASPRRDSPMLRLNCASLSE
                     ALLESELFGHERGAFTGACSAKPGLIELADGGTVFLDEVGELAPALQAKLLRLIETRE
                     LMRVGGVRPRPIDVRFLFATNRDLQAEVQAGRFRADLFFRLSGAVVQIPPLRERRSEI
                     LTLAEACVARAAARLELSVTPRFSSDAEAQLLAHAWPGNVRELRNAIERAVLLSHSST
                     LRAEDLALDLGSVGQHTAGASLATVPPSTDASSERDRIARALVECGGNQSRAAAALGM
                     PRRTFVRR"
     gene            1828..>2086
                     /locus_tag="VLJ38_19900"
     CDS             1828..>2086
                     /locus_tag="VLJ38_19900"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HSU41858.1"
                     /translation="MRAPFLRPLPVQKIQPHNTALLVVDMERDFIEEGAVQETPGGRA
                     LIPIVNGLSTWARSHRVPVIFTFEAHRADHADYGIELEYDPV"
BASE COUNT          333 a          722 c          708 g          323 t
ORIGIN      
        1 gtcggcgcac gaaagtacgg cgcggcatgc cgagcgctgc cgcggcgcgg ctctggttgc
       61 cgccgcattc gacgagagcg cgcgcgatgc ggtcgcgctc ggaggatgcg tcggtcgacg
      121 gcggcaccgt cgcgagtgaa gcgccggccg tgtgctggcc gacgcttccg aggtccagcg
      181 ccaaatcctc ggctcgaagc gtggacgaat ggctcaaaag cacggcgcgc tcgatcgcgt
      241 tgcgaagctc gcgcacgttg ccgggccaag catgcgcgag cagctgcgct tctgcgtcgc
      301 tgctgaaccg cggcgtgacg ctgagctcta aacgcgcggc tgcgcgcgca acacacgctt
      361 cggcgagcgt gagtatttcc gaacggcgct cgcgcagcgg cggtatctgc acgacggcgc
      421 cgctcaggcg gaagaacaag tccgctcgga atctgcccgc ctgaacctct gcctgcaaat
      481 cgcgattggt cgcgaacagg aatcgaacgt cgatcggccg cggccgcacg cctccaacgc
      541 gcatgagctc gcgcgtctcg atcaggcgca ggagcttggc ctgaagcgcc ggcgcaagct
      601 cacccacctc gtcgaggaag acggttccgc catcggcgag ctcgatcaag cccggcttgg
      661 ccgagcaggc gcccgtgaac gcaccacgct cgtgcccgaa aagctcgctc tcgagcaacg
      721 cttcggagag cgaagcgcag ttgagccgca gcatcggaga gtcccggcgc ggggaggcac
      781 gatggatcgc ctcggccgcg acctcctttc ccacgcccgt ctcgccgaca atcaacacgt
      841 tgatctgccc ctgcgccagc cgttcgatgg tgcagaagat ttttttcatg accgggtcgc
      901 agaccacgat gccggactcg ctggcgtccg gcttcgccgc gtgctcgccg agcgtttcca
      961 ctgccgcagc cgcccgccgc acgattagca acgtttgacc gaccgagatc gcttgccccg
     1021 gctcgatcga ggcaacggca ccgggcgcca gccgttcggc gccgagcttg gtcccgttcg
     1081 cgctgcccgc gtcctggatc gagagtggac gcacgtgcag gagtgcgtgc cgacgggaga
     1141 cgagcgcgtc cccgaggcga atttcgcact cctcgccgcg gccgatgctc acggatccgt
     1201 ctgtaggcag tgaaaatagg gcgagtccgg tcgcttcgag cgcgaggagc tggagccgca
     1261 actcgccgcc gctgcgtgag ctcacgcagt cgagcgtcgt gctgacttcg ccgtcgtagg
     1321 caggccgagc tgctacagcc gtcccgccgg cctgcgtgtg cgtcccgtcg cgcattacgg
     1381 cgattctagc ggcatcgctc gcagacgaca aggtccgctg ccgcgagccg ccctcggctc
     1441 cgcggttcgt cgggttgcgc ggccgcgccg ttccgcgtta cgagtagtgc gcacgccgtc
     1501 gtgttcgaac atggccgggg aaggcgtacg cgaacgcctc cgggtgcagg tcggcgccga
     1561 ggaagacacc attcgcatgt gggagcgtcc ggagcaggag cctccgccgg cgacgacgac
     1621 gtcgccaacc ttctcggagt tgcgcctgcg ccgagcgcga ccggcatgct gctccaccgc
     1681 gcggtcgcgc gctaccgtcg cggcgagctc gtgggtggcg atgaaagctg cgcgttgacg
     1741 ccaggttgag acgtgtcgac gactggcgta tcgggaaacc gcgccgcaac cgagtgcagc
     1801 taggatccgg gccacccgag atcgcccatg cgcgcgccct tccttcgccc gctgcccgtt
     1861 cagaagatcc agccgcacaa cacggcactc ctcgtcgtcg acatggagcg cgacttcatc
     1921 gaggaaggtg cggtgcagga gacgcccggc ggtcgcgcgc tgattccgat cgtcaacggg
     1981 ctctcgacgt gggcgcgtag ccatcgggtg ccggtgatct tcacgttcga ggcgcaccgc
     2041 gccgatcacg cggactacgg catcgagctc gagtacgacc ccgtcc
//
LOCUS       DATIML010001153         3350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1399174, whole genome shotgun sequence.
ACCESSION   DATIML010001153 DATIML010000000
VERSION     DATIML010001153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3350
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1399174"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VLJ38_19905"
     CDS             <1..227
                     /locus_tag="VLJ38_19905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41859.1"
                     /translation="EPARVVWWGPVAKYLNDPDALPASEIQACLDHHNGVLEKSWRAL
                     GLKSRYVLARLIEKHGLEVRRRPTHGPLGA"
     gene            complement(340..780)
                     /locus_tag="VLJ38_19910"
     CDS             complement(340..780)
                     /locus_tag="VLJ38_19910"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSU41860.1"
                     /translation="MSTAPISKILAPVDLSSCSRAALEFAYKLAVPFSARIEVMFVRP
                     QNGITPSGEAPASKEDELAAARAELHRFVMSIPGTRPGVIAERVETGNAHEQIIRVAE
                     SGGFDVIVLGTHGRTGRVRSLAGSVAETTVRTASCPVITVREPR"
     gene            complement(969..1976)
                     /locus_tag="VLJ38_19915"
     CDS             complement(969..1976)
                     /locus_tag="VLJ38_19915"
                     /inference="COORDINATES: protein motif:HMM:NF005741.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase-like protein"
                     /protein_id="HSU41861.1"
                     /translation="MDLTTRYLGLTLPHPLMLGASPLVDDLDAVRRAEDLGAAAIVMH
                     SLFEEQIVRERREHESALRHEDSFAEALYFSPHRAELPLGPHEYLEQIRRIKDAVHIP
                     VIASLNGTSNSGWLEYAALIDQAGADALELNAYRVATNPDESAESIERTTAEMLASVK
                     ARTRLPVAVKLSPYYTSLAHFARRLEAAHVDGLVLFNRFYQPDVDLDALEVAHRLELS
                     TSADILLRLRWLAILSAQVNVSYGVSGGVHSAEDIVKVVMTGADGVQLVSEILAHGLH
                     RFAELKRDLEHWLEAHEYHSLAQARRSMNLSHCPDPEVYERVNYMRVLSSWRPPAAPA
                     H"
     gene            complement(1976..>3350)
                     /locus_tag="VLJ38_19920"
     CDS             complement(1976..>3350)
                     /locus_tag="VLJ38_19920"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSU41862.1"
                     /translation="WKGHDFPGESYALSVAPEDCTGCRLCVEVCPAKDKSNPRHRALE
                     MQPLAPMFEASRQRYDFFLALPEVERKRVHLDVKGSQLLEPLFEYSGACAGCGETPYL
                     KLLTQLFGDRLLIANATGCSSIYGGNLPTTPYAANKEGRGPAWANSLFEDNAEFGFGM
                     RLAVDAQRDMAQQLLRTFSGRFADTFVSALLEADQTSEAGIAEQRSRVAELRLALRPL
                     HEPAAEQLLAVSDYLVEKSLWIVGGDGWAYDIGFGGLDHVLASTENVNVLVLDTEVYS
                     NTGGQKSKATPRAAAAKFAALGKDTEKKDLGLHAMSYGHVYVARVAFGAKDAQTVRAF
                     VEAEAHRGPSLVIAYSPCIAHGYDLAFGARQQKLAVESGVWPLFRFDPARLERGEPPL
                     ELDATPGKSSLREYFAGEARFRLVERRDPARYERLIAASERDVRHRIELYRALSELRL
                     SASKQEL"
BASE COUNT          559 a         1052 c         1158 g          581 t
ORIGIN      
        1 cagagcctgc gcgagtggtc tggtgggggc ctgtcgcgaa gtatctgaac gacccggacg
       61 cgctcccagc gagtgagatt caagcatgtc tggatcacca caacggagtg ctggaaaaga
      121 gctggcgtgc actcggcctc aagagccgct acgtcctcgc gcgcctgatc gagaagcacg
      181 gcttggaggt tcgacggcgc ccgacccacg gaccgcttgg agcttaacga gggtggccag
      241 agtcggttgc gtagtcggtc gatccgaagg gctcgcagaa catagtctct aactttcgta
      301 cgaactctgg aagaccgcgc atcggctgcg gcaggcgtat cagcgtggtt cgcgcaccgt
      361 gatgacgggg catgaagccg tgcgcaccgt cgtttcggcc acgctgccgg cgagcgagcg
      421 tacgcggccg gtgcggccgt gtgttccgag cacgatcacg tcgaagccgc cgctctccgc
      481 gacgcgtatg atttgctcgt gcgcgttgcc ggtttcgacg cgttcggcga tgacgccggg
      541 acgcgtgccg gggatgctca tgacgaagcg gtggagctcc gcacgcgcgg ctgcgagctc
      601 gtcctctttg gacgctggcg cctcgccgct cggcgtgatg ccgttctgcg gacgcacgaa
      661 catgacctcg atacgcgcgc tgaacggcac ggcgagcttg taagcgaatt cgagcgcggc
      721 cctcgagcag gacgacaggt cgacgggtgc cagaatcttg gaaatcggag cggtggacat
      781 gatgcttcct ctcgtcggcg atgcgccgtt gagtccttag gtagcaagcc acgtgccctg
      841 cccgcttgcc gtccaacctg cggcttgtca gcggagcccg cgctagcctt gcggcttggc
      901 gcccctggca cgcaagcggt gcgcgctctc cgccctgcga ccaccttcgg catcggcgct
      961 cgtcgtcttc agtgcgcagg cgctgccggc gggcgccacg agctcaagac acgcatgtaa
     1021 ttgacgcgtt cgtagacctc gggatcgggg cagtgggaaa ggttcatgct gcggcgcgcc
     1081 tgcgcgagcg agtgatactc gtgtgcctcg agccagtgct cgagatccct cttgagctcg
     1141 gcgaagcggt gcagaccgtg cgctaggatc tccgacacga gctgcacgcc gtccgcgccc
     1201 gtcatcacga ccttgacgat gtcttccgcc gagtgaacac cgccgctcac gccgtaactc
     1261 acgttcactt gcgccgatag aatcgcgagc cagcgcagcc gcaacaggat gtcggccgac
     1321 gtcgagagct cgagccggtg cgcgacttcg agcgcgtcga ggtcgacgtc cggctgatag
     1381 aagcgattga agagcacgag cccgtccacg tgcgcagcct cgaggcggcg cgcgaaatgc
     1441 gcgagcgacg tgtagtaagg tgaaagcttg acggcgacgg gcagccgcgt tcgagccttg
     1501 acgctggcga gcatctccgc cgtggttcgc tcgatgctct cggccgactc gtccggattg
     1561 gtcgcgacgc ggtacgcgtt gagctcgagc gcgtcggcgc ccgcttgatc gatgagcgcc
     1621 gcgtactcga gccagccgct attgctcgtc ccgttcaggg aggcgatgac ggggatgtgt
     1681 acggcgtcct tgatccgacg aatctgctcg aggtactcgt gcggcccaag gggtagctcc
     1741 gcgcggtgcg gcgaaaaata gagagcttcg gcgaacgagt cctcatgccg cagggcggac
     1801 tcatgctccc tgcgctcgcg cacgatctgc tcctcgaaca gggagtgcat gacgatcgcc
     1861 gccgctccga ggtcttcggc gcgccgaacg gcgtcgaggt cgtccacgag cggcgaggcc
     1921 ccgagcatca gcgggtgcgg caaagtcaaa ccgagatagc gagtcgtgag atccattaga
     1981 gttcctgttt cgaggccgag agcctcagct cggagagtgc tcgatagagc tcgatgcggt
     2041 gtcggacgtc gcgttccgaa gcggcgatca ggcgctcgta gcgggcgggg tcccggcgct
     2101 ccaccaggcg aaaacgcgcc tcgcctgcga agtactcgcg caagctggat ttgccgggcg
     2161 tggcgtcgag ctcgagtggg ggctcgccgc gctcgagccg cgcgggatcg aagcgaaata
     2221 gcggccagac gccggactct acggcgagct tctgttggcg agcgccgaag gcgagatcgt
     2281 agccgtgcgc gatgcacggc gagtaggcga tgacgagcga cgggccgcgg tgtgcttccg
     2341 cttcgacgaa ggcccgcacg gtttgggcgt ccttggctcc gaacgccacg cgtgccacgt
     2401 agacgtggcc gtagctcatc gcgtgcaggc cgaggtcttt cttctcggtg tctttgccga
     2461 gcgcggcgaa cttggctgcg gcggcgcgcg gcgtggcctt cgacttctgg ccgcccgtgt
     2521 tcgagtagac ttcggtgtcg aggacgagga cgttcacgtt ctcggtcgag gcgagtacgt
     2581 gatcgaggcc gccgaacccg atgtcgtagg cccagccgtc gccgcccacg atccacaggc
     2641 tcttttcgac caagtagtcg ctgaccgcaa gcagttgctc cgcggctggc tcgtggagcg
     2701 gtcgcaaggc gagccggagt tcggcgacac gactgcgctg ttcggcgata cccgcctcgc
     2761 tcgtctggtc ggcctcgagc aaagcgctca cgaaagtgtc ggcgaagcgg cccgagaacg
     2821 tgcggagcag ctgctgtgcc atgtcgcgtt gagcgtcgac tgccaagcgc atgccgaagc
     2881 cgaattcggc gttgtcctcg aacagcgagt tcgcccaggc gggcccgcgc ccttccttgt
     2941 tggcagcgta cggggtcgtg ggcagattgc cgccgtaaat cgaggagcag cccgtcgcgt
     3001 tcgcgatcag gagccgatcg ccgaaaagtt gtgtcaagag cttgaggtag ggcgtctcac
     3061 cgcagccagc gcacgcgccg gagtactcga agagcggctc gagcagctgc gaacccttga
     3121 cgtcgagatg cacgcgcttg cgctcgacct cgggcaaagc gagaaagaag tcgtagcgct
     3181 gccggctcgc ctcgaacatc ggcgcgagcg gctgcatttc gagcgcgcgg tggcgcggat
     3241 tgctcttgtc cttggccggg cagacttcca cgcacagccg acagcccgtg cagtcttcgg
     3301 gcgcgaccga aagcgcgtag ctttcacccg gaaaatcgtg gcccttccaa
//
LOCUS       DATIML010001154         1676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1978656, whole genome shotgun sequence.
ACCESSION   DATIML010001154 DATIML010000000
VERSION     DATIML010001154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1978656"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..1492)
                     /locus_tag="VLJ38_19925"
     CDS             complement(167..1492)
                     /locus_tag="VLJ38_19925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HSU41863.1"
                     /translation="MNELKRALLEKIAAGTCHVGIIGLGYAGLPLALAFVERAKLKVT
                     GFDVDAAKVQELARGRSYLLHVPSDRIARARATGLFDATTDLDELAHPDALLIAVPTP
                     LSGAREPNLEHVASTARAIAQRLRPGQLIVLESTTYPGTTEGLLLELLEGSGLTSGRD
                     FFLAYSPEREDPGNREFLTAAIPRLVGGVDPDSAQIAAALYARALDQVVPVQRVRIAE
                     AAKLAENVFRSVNIALVNELKVVFDRMGIDVWDVLDAAATKPFGFMRFEPGPGAGGHC
                     IPIDPLYLAWSAREAGVHARLIELAAEINGEMPRYVVGKLERALGLQRRSLEGSQILL
                     LGIAYKKDSDDPRESPGLRLLSLLHERGASVAYHDPRVPVLPRLVTGAELPALASQPL
                     TEGLLRTHDAVLLCTDHTDLDTARVLKYARLIVDTRGVYREPHPKVVKA"
BASE COUNT          260 a          526 c          588 g          302 t
ORIGIN      
        1 cttggctttc gaggccttct tcgctttgac tgccgacttc gacttttttg gcgctgccgt
       61 cttcttcatg cccatggttc gtctttgctc cgggagagcg accactctat cgcgaacgtg
      121 gagcgagaat cgcgccggtc ggcggcagca gcgtcgtgcc gtagcttcag gccttgacga
      181 ccttcggatg gggctcgcgg tagacgccgc gcgtatcgac gatgagccgc gcgtacttca
      241 agactcgtgc cgtatccagg tcggtgtggt cggtgcaaag cagcacggcg tcatgcgtcc
      301 gcaggagccc ttcggtgagc ggctgcgatg cgagagccgg cagctcggct ccggtcacga
      361 gccggggaag cactggcacg cgcgggtcgt ggtaagcaac gctagcgccg cgctcgtgga
      421 gcaggctcaa gagcctgagc ccgggacttt cgcgcgggtc gtcgctgtcc ttcttgtagg
      481 cgatgccgag cagcaggatc tggctgccct cgagtgaccg ccgctgcagg cccaaggcgc
      541 gttcgagttt gccaacgacg tagcgtggca tctcgccgtt gatttcggcg gcgagctcga
      601 tgaggcgcgc gtggacgccg gcttcacgtg cactccacgc gaggtacagc ggatcgatgg
      661 ggatacaatg gccgcctgca cccgggccgg gctcgaagcg catgaagccg aacggtttgg
      721 tcgcggcggc gtcgaggacg tcccacacgt cgatgcccat ccggtcgaac acgactttga
      781 gctcgttcac gagcgcgatg ttgacgctac ggaagacgtt ttcggcgagt ttggccgctt
      841 cggcgatgcg gaccctctgc acggggacga cctggtcgag cgcccgcgcg tagagcgccg
      901 ccgcgatttg cgcggagtcc gggtcgacgc cgccgaccag tctaggaatc gcggccgtca
      961 agaactcgcg attgccggga tcctcgcgtt cgggggagta ggcgaggaag aagtctcggc
     1021 cgctcgtcag gccggaacct tcgaggagct cgagcaggag accttcggta gtcccgggat
     1081 acgtggtcga ttcgagcacg atgagttggc cggggcggag tcgctgcgcg atcgctcgag
     1141 ctgtgctcgc gacgtgctcg agattcggct cgcgcgctcc gctgagcggg gtcggtacgg
     1201 cgatgagcaa agcgtcggga tgcgcgagct cgtcgagatc ggtcgtcgcg tcgaagagtc
     1261 cggtcgcccg agcgcgcgcg atgcggtcgc tcgggacgtg cagcaggtaa gaccggccgc
     1321 gtgcgagttc ctgcaccttc gccgcgtcga cgtcgaagcc cgtcaccttc agtttcgcgc
     1381 gttcgacgaa ggcgagcgcc agaggcagcc cggcgtaccc gagaccgatg atgccgacgt
     1441 ggcacgtgcc ggcggctatc ttttcgagca gtgctcgctt gagctcgttc acggtatcga
     1501 gggtccgctg ccgtcagcta gctaacatga cgcagcccgg cgaggctacc ggcggagaat
     1561 tggcccttgc gccggcgcgg gcgtcacatt cccgccgccg tccgccgcac cgtcttcgag
     1621 cgcgacgcaa ccgctgtagc tacctcgacg cgaacggaac gcgttgcctc gaaact
//
LOCUS       DATIML010001155         2406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1399612, whole genome shotgun sequence.
ACCESSION   DATIML010001155 DATIML010000000
VERSION     DATIML010001155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1399612"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..537
                     /locus_tag="VLJ38_19930"
     CDS             64..537
                     /locus_tag="VLJ38_19930"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSU41864.1"
                     /translation="MGLVEDEAAQAIHQFYAALDQLLRGFGSHAMSEIWDHGSEVTTS
                     HPFGDWARGWGEVSASWEETHAVFALYKGHAARSDSVGKIDGLHVLVVGDMALATSVY
                     KGTMYMSEGPLRLNVNCTNVARRIDGRWKIIHHHTDQAPPEWNAAIGAMVQRGHS"
     gene            complement(542..>2406)
                     /locus_tag="VLJ38_19935"
     CDS             complement(542..>2406)
                     /locus_tag="VLJ38_19935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41865.1"
                     /translation="VLLSSCMPRLVYGAGRALYGPLAAGLAALAYVVLPITLAYANYL
                     SLEVTTMFGMALATYGYARFAQSGRYRFALLAVLGFAYAAACDWTGFCFDGLLLAALF
                     LRGFVFPRPFGPFVFERFAKFWAWAVVVVTLLALFHLAALVKLERLSELLQQGEFRTA
                     GSDLPLAVALEHRRYWIALAFTPFAIVIGKLALPVLALRLVFRRRELELFPLAVLVIA
                     SGQYVIFKQGADIHFFWPQYFALYFAYGVGALVATLDGWLGWAEGRRSLVPRRALVSW
                     VMGALGLVSVLAILPDGLVALVYARKSGGRFNERGSIIHPDFDKAAAFAAAAKDLPAG
                     AIFGVSSSMKPSYWMDWVLRRPVRYVGLPRVDSAGVTNFALDTRFDTRGALETLTREF
                     PVRAIGPFLIADIRPEPQPVEGFATVPRRLGAFERFFTATSHDVYEVVPDPFWTWELR
                     THLSQAPNPVPSARPTSFEDLRIAYNVAVAQQDPRAERLKSELFAGVDRNVHRAYTEG
                     VELLGARLERGASTRLTVYFQTSEPLASDTMFQIVSNVEAAPRFSLVPRDELTWDVGM
                     PFAIPTTLWRPGFIYSSITELTRRPGSERYDGAFRGPMAPTPLTPSSAPLLRLP"
BASE COUNT          472 a          776 c          841 g          317 t
ORIGIN      
        1 cacgaagcgt gtcgacgcta gacgtgaggg gaagctcagc gcgagccaca ggagaactcc
       61 gagatgggat tagttgaaga cgaagccgcc caggcaattc accagttcta cgctgcactc
      121 gaccagctac tgcgggggtt cggctcgcac gcgatgagtg aaatctggga ccacggcagc
      181 gaggtcacga cctcgcatcc gttcggtgat tgggcgcgcg gctggggcga ggtgtcggcg
      241 tcgtgggaag agacgcacgc ggtctttgca ctttacaaag gccacgcggc gcgatccgat
      301 agcgtaggca aaatcgacgg actgcacgtg ctcgtcgtcg gtgacatggc gctcgctacc
      361 tccgtctaca agggcacgat gtacatgtcc gaagggcccc tccggctgaa cgtgaactgc
      421 acgaacgtgg cacggcggat cgacggccgc tggaagatca tccaccatca caccgatcaa
      481 gcgcccccgg agtggaacgc cgcgatcggc gcgatggtcc agcgcggaca ctcctgagtc
      541 gtcacggcag ccggagcagc ggcgccgagc tcggcgtgag cggcgtcggt gccatcggac
      601 cgcgaaacgc gccgtcataa cgttcgctgc cggggcgtcg cgtcagctcc gtgatcgagc
      661 tgtaaatgaa gccggggcgc cagagcgtcg tcggaatggc gaagggcatg cctacgtccc
      721 acgtgagctc gtcacgcggc acgagcgaga agcgcggcgc cgcttccacg ttcgagacga
      781 tctggaacat ggtgtccgaa gcgagcggct cgctcgtctg gaagtagact gtcagacgcg
      841 tggaggcgcc gcgctcgaga cgcgcgccga ggagctcgac gccctcggtg tacgcgcgat
      901 gcacgttgcg atcgacgccg gcgaaaagct cgctcttcag ccgttcggcg cgcgggtctt
      961 gctgcgcaac ggcgacgttg taggcaatgc gcagatcctc gaagctcgtc gggcgcgcgc
     1021 tcggcacggg gttcggtgcc tggctcaggt gcgtgcgaag ctcccaagtc caaaacggat
     1081 ccggcactac ctcgtacacg tcgtggctcg tcgccgtgaa gaagcgttcg aacgcgccga
     1141 gccggcgggg cacggtggcg aagccttcga cgggctgcgg ctcgggcctg atgtcggcga
     1201 tcaggaaagg cccgatggcg cgcacgggaa actcgcgcgt gagcgtctcg agtgcgccgc
     1261 gcgtgtcgaa gcgcgtatcg agcgcgaagt tcgtcacacc ggcgctgtcg acgcgcggca
     1321 agcccacgta gcgcacgggt cgcctgagca cccagtccat ccaatacgac ggcttcatgc
     1381 tgctcgagac gccgaagatg gcgcccgcgg gcagatcctt ggccgcggcg gcgaacgcgg
     1441 cggccttgtc gaaatcggga tgaatgatgc tgccccgctc gttgaagcgc ccgccggatt
     1501 tgcgcgcgta gacgagcgcg acgaggccgt ccggcaggat cgcgagcacg ctcacgagcc
     1561 cgagcgcccc catgacccag ctcacgagcg cccggcgcgg cacgagcgag cgccgcccct
     1621 cggcccagcc gagccaaccg tcgagcgtcg caacgagcgc gccgactccg taggcgaagt
     1681 agagcgcgaa atactgcggc cagaagaagt ggatgtcggc gccctgcttg aagatcacgt
     1741 actgcccgct cgcgatcacg agcacggcga gcggaaagag ctcgagctca cgccggcgaa
     1801 agacgaggcg cagggcgagc acgggcaacg ccagcttgcc gatgacgatc gcaaaaggcg
     1861 tgaaggcgag cgcgatccag tagcggcggt gttcgagcgc cacggcgaga ggtaaatccg
     1921 agcccgccgt gcgaaactcc ccttgctgca agagctcgct cagacgctcg agcttgacga
     1981 gcgctgcgag atgaaacagc gcgagcagtg tgaccacgac caccgcccaa gcccagaact
     2041 tggcgaagcg ctcgaacacg aacggcccga acggccgcgg gaacacgaag ccgcgcagaa
     2101 acagcgccgc cagcagcagc ccgtcgaagc agaaccccgt ccagtcgcag gccgcggcgt
     2161 aagcgaaccc cagcaccgcg agcagcgcga agcggtagcg tccactctgc gcgaagcggg
     2221 cgtagccgta ggtcgcgagc gccatgccga acatggtcgt gacctcgagc gacaggtagt
     2281 tcgcgtacgc gagcgtgatc ggcaggacga cgtaagcgag cgcggcgagg ccggccgcga
     2341 gcgggccgta cagcgcccgt ccggcgccgt agacgagtcg cggcatgcag ctgctcaaga
     2401 gcacgg
//
LOCUS       DATIML010001156         3240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_820736, whole genome shotgun sequence.
ACCESSION   DATIML010001156 DATIML010000000
VERSION     DATIML010001156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820736"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1970
                     /locus_tag="VLJ38_19940"
     CDS             <1..1970
                     /locus_tag="VLJ38_19940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41866.1"
                     /translation="AKVLDAFPREHSKEREELIVRAVERGAYDPPEWRTLTSNYKGRR
                     AEIQVSSDALTILGVRIDVTAEGAQRIADALGTILPTPRILQLIWEQADVRLDPCNSN
                     PDATMASTARMLQHSECVDQRIAGRKGMVANEGKHWVLSNRIAGKANIAANYGWFVKG
                     RRPIQTVGTRHDTAHTDYSQIVRLIKPVIKVDGREMDIRQVGRSPELWGLVSDEGPLL
                     VWRASGADQTGVLDQRPVAAAPPPEPGDPKSVRVTLKSEGIPIAPEQLPATTTALRHN
                     TFLRRILSSLRLRPADVPDVAYASAGASACGGRDVFFELMNEVPVDLAELEQTKDSVQ
                     RALACGQALAPLVRAGAGPYEVEYAYDSAPSGFALLSLTDASFRDKILQAPLSPTPSG
                     VHRAYCNDDSGGPRSACEDGARARLLLAVNNGYVAAYAREVPSLLERLSDSHPLPPET
                     AALVALFLEPSSAEEVAVAQAGRCGFAVDFTAVELSPDETSRQRVLDAINDNAVLCGT
                     QASGSVLRSTRRMVFVTKDEAGAQAIRGALKQRALELRFEAGVAQPNRADQQEFTKAL
                     RSAAARTAASAEIQVEGRRLSVTLALAPNAAELRGMAKLLDARAAKAKLAADIVQGLA
                     DGKLPTAEQLAVFGAPPSGVPLASRANALGH"
     gene            complement(1991..3031)
                     /locus_tag="VLJ38_19945"
     CDS             complement(1991..3031)
                     /locus_tag="VLJ38_19945"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSU41867.1"
                     /translation="MREPLMPLASSTDRASSRSRRPSLIGLALLAVGLGLFALAVARA
                     GVSAIGAQLSRVGPRAVWLLLPYAVGTALGALPWAALLPSELRPRLLGVVSGRFVASS
                     ANALLPFFGLAGEPTRLLWLGPEARARGLAAIVVDRVLYNCSNGFLLLGGAAVALEAT
                     HLPRPLSLGAAGAALATLAVTGALMWGAIRSGVGRRVQALLRRMLGKLYTADSFGAEV
                     DAELLSLVRERPLRLGLGVLTHMLARSVILLEVYLALRLLGVAFSPADAVVLAVVPIG
                     LSLFFSSVPSQLGIQEGGQALVAAALGMSPSVGVTLVLLQRFRQLVFAAVAPLLLELG
                     RPTPSEPRGPRS"
     gene            3015..>3240
                     /locus_tag="VLJ38_19950"
     CDS             3015..>3240
                     /locus_tag="VLJ38_19950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41868.1"
                     /translation="MSGSRIQLLYLQPAPLFGGAERQAAEQASYLPEFGIDVTVMAGP
                     GQAIIDWLEAGHAGRIIHSENFPGGGRPRKG"
BASE COUNT          598 a         1117 c         1092 g          433 t
ORIGIN      
        1 tcgcaaaagt gctggatgcg tttccgcgcg agcacagcaa agagcgggag gagttgatcg
       61 tgcgggccgt ggagcggggc gcgtacgatc cgccggagtg gcgaacgctc acgtccaatt
      121 acaagggccg gcgggctgaa atccaggtga gcagcgatgc gctcacgatc ctcggcgtgc
      181 gtatcgacgt gaccgcggag ggagcccagc gcatcgccga cgcactcggt acgatcctgc
      241 cgacgccgcg gatcctgcag ctgatctggg agcaagccga cgtgcggctc gacccctgca
      301 attccaatcc ggacgcgacg atggccagca cggcgcgcat gctccagcac tccgagtgcg
      361 tcgaccagcg catcgcgggc cgcaaaggca tggtcgccaa cgaaggcaag cactgggtgc
      421 tctcgaaccg catcgcgggc aaagcgaaca ttgcggccaa ttacggttgg ttcgtcaagg
      481 gacgccgccc gattcaaacc gtgggcacgc gccacgacac cgcgcacacc gactactcac
      541 aaatcgtcag actcatcaaa cccgtcatca aagtagacgg gagagaaatg gacattcgcc
      601 aagtcggccg ctcgccggag ctctggggac tcgtctccga cgaggggccg ctcctcgtgt
      661 ggcgggcttc aggcgcggac cagaccggtg tgctcgacca acggcccgtc gctgccgcgc
      721 cgccgcccga gccaggcgac ccgaagagcg tgcgcgtcac gttgaaatcg gagggcatac
      781 cgatcgctcc cgaacagctg cccgcgacca cgacggcgct caggcacaat acgttcttgc
      841 gcaggatcct gtcctcgctg cgcttgcggc cggcggacgt gccggatgtc gcttacgctt
      901 ccgctggagc ttccgcctgc ggcgggcgcg acgtcttttt cgagttgatg aacgaggtgc
      961 ccgtggatct cgccgagctc gagcaaacca aggactcagt tcaacgagcc ttggcctgcg
     1021 gccaagcgct cgctccgctc gttcgcgcgg gagcggggcc gtacgaggtc gaatacgctt
     1081 acgactcggc gccgtccggt ttcgcgctgc tatcgctgac ggacgcgtcg tttcgcgaca
     1141 aaatcttgca ggccccgctg tcaccgacgc cgtccggcgt gcaccgcgcg tactgcaatg
     1201 acgactccgg tggcccccgc tcggcgtgcg aggatggtgc gcgcgcgcgg ttgctcttgg
     1261 ctgtcaataa cgggtacgtc gcggcctacg cgcgcgaggt cccgagtctg ctcgaacggc
     1321 tcagcgacag ccacccgcta ccgccggaga cggcggcgct cgttgccttg ttcctcgagc
     1381 cctcttccgc cgaggaagtg gccgttgccc aagccggccg ctgcggtttc gccgtagatt
     1441 tcaccgccgt cgagctgtca ccggatgaaa cgagccgcca gcgcgtcctc gacgccatca
     1501 atgacaacgc ggtcctctgc gggacgcaag cgtctggctc cgtcctccgc tcgacgcgtc
     1561 gcatggtgtt cgtgacgaag gacgaagccg gcgcgcaggc cattcgagga gcattgaagc
     1621 agcgtgccct cgagctccgt ttcgaggccg gagtcgctca gccgaaccgc gccgaccagc
     1681 aagagttcac caaagccttg cgctcggccg ccgcgcgcac cgctgcctcc gccgagatcc
     1741 aggtcgaagg gcggcgcctc tcggtgacgc tggcgctcgc cccgaacgca gctgaactgc
     1801 gcggtatggc gaaactcctg gacgcgcgcg cggccaaggc gaagctcgcc gccgacatcg
     1861 tgcagggact cgccgacggc aagctgccca cggccgaaca gctcgcggtc ttcggcgcgc
     1921 ctccgagcgg cgtcccgtta gcgagtcggg cgaacgcgct cggccattga ccgatggcgt
     1981 agcggtgccg tcaggagcgc gggccgcgcg gctcgctcgg cgtcgggcgc cctagttcga
     2041 gcagcagcgg cgcgacggca gcaaagacga gctggcgaaa gcgctggagc aagacgagcg
     2101 tgacgccgac cgaggggctc atgccgagcg ccgcggccac gagcgcctga ccaccttctt
     2161 ggatgccgag ttggctcgga acggaagaga agaatagcga caaaccgatg ggcaccacag
     2221 cgagcacgac cgcgtcggcc ggggagaacg cgacgccgag cagccgcagc gcgagataga
     2281 cctccagcaa gatcaccgaa cgcgcgagca tgtgcgtcag gacaccgagc ccgagacgta
     2341 gcggccgctc gcggacgaga ctcaagagct cggcgtcgac ctcggcgccg aagctgtccg
     2401 ccgtgtagag cttaccgagc attcgccgca agagcgcctg cacgcgccgc ccgacaccgg
     2461 agcgaatcgc accccacatg agcgcgccgg tcaccgcgag tgtcgcgagc gccgcgccgg
     2521 ccgcaccgag cgagagcggc cgcggcaagt gcgtcgcttc caaggcgacg gcggcgccgc
     2581 cgagtaacaa aaagccgttc gagcagttgt agagcacgcg atcgacgacg atggccgcga
     2641 gcccccgcgc acgcgcctcc ggtccgagcc acaagaggcg cgtgggctca ccagccaagc
     2701 cgaagaacgg caatagtgcg ttggcgctcg acgcgacgaa gcgtccgctc acgaccccga
     2761 gcaggcgtgg ccggagctcg gaaggcaaga gcgccgccca cggcagagcg ccgagcgccg
     2821 tcccgacggc gtacggcagc aacagccaga cggcccgggg tcccaccctc gagagttgag
     2881 cgccaatcgc cgagacgccc gcgcgcgcga ccgccagcgc aaaaagcccc aaacccacgg
     2941 ccaggagcgc gaggccgatc agcgacggcc ggcgcgaacg ggacgaggca cggtccgtgc
     3001 ttgaggcaag tggcatgagc ggttctcgca ttcagctgct gtaccttcag cccgctccac
     3061 tcttcggcgg cgcggagcga caagcagcag agcaagcttc gtacctcccg gagttcggca
     3121 tcgacgtcac ggtgatggcc ggacccggcc aggccatcat cgactggctc gaagcggggc
     3181 acgctggaag gatcattcac tccgagaact ttccgggagg cgggcgaccg cgcaaaggac
//
LOCUS       DATIML010001157         1812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3989815, whole genome shotgun sequence.
ACCESSION   DATIML010001157 DATIML010000000
VERSION     DATIML010001157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3989815"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="VLJ38_19955"
     CDS             <1..365
                     /locus_tag="VLJ38_19955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41869.1"
                     /translation="AASTAPRGNDGSALRTGGFIAAGVGGAGLITFVVGGLEARKAYS
                     ALKQECGATACSDTAHQRDVDRGKSWQTVANVGLVVGSIGVAASATLLYFGYRKGETS
                     VSVTPVAGGALLRGEARF"
     gene            362..1252
                     /locus_tag="VLJ38_19960"
     CDS             362..1252
                     /locus_tag="VLJ38_19960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_function: GO:0120153 - calcium-dependent carbohydrate
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lectin domain-containing protein"
                     /protein_id="HSU41870.1"
                     /translation="MTRRRSVRQLETLGAAALVLGAAAASCTYDFDQFVREPTGGASS
                     AGHGSVATGGTAGHGGASGRAGTGGQASPSDSGGAADAGEGGASAASTSGGTGATAGA
                     GGTANGGGGTGGKPSDTAGKTGSSGKANAAGQGGVSGAPASAGAGGKPSTSCSGTSYG
                     GHCYFLIGSDTGVDWPSAKSMCEAYSTKTHLVTITSSDEQAALAAAFFPTQTDTWIGL
                     SLADPSRSPDSICKLLADQCPFQWVTGEALSYTDWAKRSGTDSEPNYTGSCVRLQAAD
                     ETWADTGCTGSKYRAICEED"
     gene            1339..>1812
                     /locus_tag="VLJ38_19965"
     CDS             1339..>1812
                     /locus_tag="VLJ38_19965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HSU41871.1"
                     /translation="MPLVFLPDVDRLFLWGEDAASRVLSALAAAGHETHYELVTPEGA
                     RECAGTELPLVETLTSFATLATTDLDALPPSAAIWVLGTKLGLELVARERVVPVLARR
                     RDRTEARWAAALSASEDAARVTALAASMPPSAHAVPVTSGALEVWAPEALLRAYLD"
BASE COUNT          269 a          599 c          687 g          257 t
ORIGIN      
        1 cggcagcctc gactgcgcca cgcggaaacg acggctcggc gctacgcacc ggcggtttca
       61 ttgccgccgg cgtgggcggt gccgggctca tcaccttcgt cgtcgggggg ctcgaagcaa
      121 ggaaggcgta ctccgcgctc aagcaggaat gcggcgcgac agcctgtagc gacaccgcgc
      181 accagcgcga cgtggatcgc ggcaagagct ggcaaacggt cgcgaacgtc gggctcgtcg
      241 tcggcagcat cggtgtcgcg gcgagcgcga cgctgcttta cttcggctat cgcaagggcg
      301 agacgagcgt gagtgtcacg cccgtggcgg ggggcgcgct cttgcgcggg gaggcgcgct
      361 tttgacgcgt cgtcgctcgg tccggcagct cgagacgctc ggcgccgcgg cgctcgtgct
      421 cggcgccgcg gcggcgtcgt gcacctacga tttcgatcaa ttcgtgcgtg agcccacggg
      481 cggcgcgtcg tcggcggggc acggctcggt cgcgaccggc gggacggcgg gacacggcgg
      541 cgcttccggg cgcgcgggca cgggcggcca ggcgagtccg agcgatagcg gcggcgcggc
      601 cgatgccggc gaaggtggcg cgagtgccgc ctcgacgagc ggcggtaccg gtgccacggc
      661 cggcgcaggc ggcaccgcaa acggcggcgg cggcacgggc ggcaaaccga gcgacactgc
      721 gggcaagacc ggctcctccg gcaaagccaa cgctgccggc cagggcgggg tcagcggcgc
      781 gccggcaagt gccggagccg gcggcaagcc gagcacgagc tgcagtggaa cgagctacgg
      841 cgggcactgc tacttcttga tcggaagcga cacgggcgtg gactggccgt cggcgaagag
      901 catgtgcgag gcatactcga ccaagacaca cctcgtgacc atcacgtcgt cggacgaaca
      961 agccgcgctc gctgcggcgt tctttccgac ccagaccgac acgtggatcg ggctttcgct
     1021 ggcagatccg agccggtcgc ccgattcgat ttgcaagttg ctcgccgacc aatgcccgtt
     1081 ccaatgggtc acgggtgagg cgctgagcta cacggattgg gccaagcgct ccggcactga
     1141 cagcgaaccc aattacacgg gctcgtgtgt ccggcttcag gcggcggacg agacctgggc
     1201 cgacacgggc tgcaccggtt cgaagtatcg ggccatttgc gaagaggatt gagtccggcg
     1261 cgggcgcggt aaagcgccac gcgcgctcgc tcgagcgcat cgagacccgg cgcgcgggct
     1321 gtggcatgta gattcggcat gccgctcgtg ttcctgcccg acgtggatcg cctctttctg
     1381 tggggtgagg acgcagcgtc gcgcgtcttg tcggcgctcg ccgccgcggg ccacgaaacg
     1441 cattacgagc tcgtgacgcc ggagggggcg cgcgagtgtg cgggcaccga gctgccgttg
     1501 gtcgagacac tgacgagctt cgcgacgctc gcgacgacgg acctcgacgc cttgccgccg
     1561 tcggcggcga tttgggtact cgggacgaag cttgggctcg agctcgtcgc gcgcgagcga
     1621 gtggtgccgg tactcgcgcg gcggcgcgat cgcaccgagg cacgctgggc ggcggcgctc
     1681 tcggccagcg aagacgctgc acgcgtgacg gcgctcgccg cgagcatgcc accctccgcc
     1741 cacgcggttc cggtcacgag cggtgcgctc gaggtgtggg ctcccgaggc gctccttcgc
     1801 gcctacctcg at
//
LOCUS       DATIML010001158         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_239369, whole genome shotgun sequence.
ACCESSION   DATIML010001158 DATIML010000000
VERSION     DATIML010001158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239369"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1225
                     /locus_tag="VLJ38_19970"
     CDS             <1..1225
                     /locus_tag="VLJ38_19970"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSU41872.1"
                     /translation="ALRVDPSSRLSQMAFERMEGVPGDHAELDAVILRYAPSELAKLE
                     AEMKRPSFRRAQMGFNNNIKFHAQVFHVQTEDSGLDQPHIITHLFADGGRVIKSHKRS
                     YASEVQRPDIAEFVRSLMKAQHLEMVLKLRDGSFDRVILGQERGGMDVLTEPPKVDNI
                     KKLAKKKEGSLTPPPPELTPPPPKRAPAAPVRTIYTLHVLRSLTGGPERYDLPVTASI
                     IGAEGEVNLPGERFCHPREASLSFEAGHVVLEDLEGGNGVFLRIRTPVELELGDEFVV
                     GDQLLRIERNPVADDGPDPDPTYFYSSPKWPSSFRVVQVFEGGAIGCSVVARGNTLQI
                     GSAVGDLIFPDDPLVADQHCLIEEQAGIMVLTDLNSRTGVFVRVRGAQELVHGDELLV
                     GRTRLVLDVPGTRAA"
     gene            complement(1326..1532)
                     /locus_tag="VLJ38_19975"
     CDS             complement(1326..1532)
                     /locus_tag="VLJ38_19975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41873.1"
                     /translation="MSKMIALIPVALLAFACGGGETTPEAKAPEAPAAAPADTTAPAG
                     DAAPAEGGDAKPAEGGDAKPADGK"
BASE COUNT          260 a          541 c          522 g          266 t
ORIGIN      
        1 agcgctgcgc gtcgatccgt cgtcccgcct ttcgcagatg gcgttcgagc gcatggaagg
       61 cgtgcccggt gaccacgccg agctcgacgc cgtgatcttg cgctacgcgc cgagcgagct
      121 cgccaagctc gaagccgaga tgaagcgccc gagctttcgg cgcgcgcaga tgggcttcaa
      181 caacaacatc aaattccacg cgcaggtctt ccacgtgcag acggaggact cggggctcga
      241 ccagccgcac atcatcacgc acctcttcgc ggacggcggg cgcgtgatca agagtcacaa
      301 gcgctcgtac gcgtccgagg tgcagcggcc cgacatcgcc gagttcgtgc gctcgctgat
      361 gaaggcgcag cacctcgaga tggtgctgaa gctccgtgac ggcagcttcg atcgcgtgat
      421 tttaggtcag gagcgtggcg gcatggatgt gctcaccgag ccgcccaagg tcgataacat
      481 caagaagctc gcgaagaaga aggagggctc gctcacgccg cccccgcccg agctaacgcc
      541 gccgccaccg aagcgcgctc ccgcggcgcc cgtgcggacc atctacaccc tgcacgtgct
      601 caggagcctc accggtggtc ccgagcgtta cgacctgccc gttacggcgt cgatcatcgg
      661 cgccgaaggc gaggtgaatc taccgggcga acgcttttgc cacccgcgcg aagcgtcgct
      721 cagtttcgag gcgggccacg tcgtgctcga ggatctcgag ggcggcaacg gcgtcttctt
      781 gcgcattcgc acgccggtgg agctcgagct cggcgacgag ttcgtcgtcg gcgatcagct
      841 actgcgcatc gagcgtaacc ccgtggccga cgacggtccg gatccggatc cgacgtactt
      901 ctattcgtcc ccgaaatggc cgtcgtcgtt ccgcgtcgtg caagtgttcg agggcggagc
      961 catcggctgc tcggtcgtgg cgcgcggcaa cacgctgcag atcgggtcag cggtgggcga
     1021 cctgattttc cccgatgacc cgctggtcgc cgatcagcac tgcctgatcg aagagcaggc
     1081 cggcatcatg gtgctcaccg acttgaactc gcggacgggt gtgttcgtac gcgtgcgtgg
     1141 cgcgcaggag ctcgtgcacg gtgacgagct cctcgtcggg cgcacgcgcc tcgtgctcga
     1201 cgtcccgggc actcgcgccg cttgaacgta cggcgcgctt cgtcgcccgg acaccccacc
     1261 acaaaaagca aacggccgag gtgcacgggg cgcctcggcc gttcgcgacc gtaattggtc
     1321 tcagctcact tgccgtcggc cggcttcgcg tcgccgccct cggccggctt cgcgtcgcca
     1381 ccctcggccg gagccgcgtc gcccgcggga gccgtggtgt cggccggagc cgcagccgga
     1441 gcttcgggag ccttggcttc cggggtggtc tcgccaccac cgcacgcgaa cgcaaggagc
     1501 gcaaccggga tcagagcaat catcttcgac atgtggagaa tccttccttg ccgagctgtc
     1561 actgggtgcg ctcggacctc gtttacaga
//
LOCUS       DATIML010001159         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3130148, whole genome shotgun sequence.
ACCESSION   DATIML010001159 DATIML010000000
VERSION     DATIML010001159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3130148"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            353..>1502
                     /locus_tag="VLJ38_19980"
     CDS             353..>1502
                     /locus_tag="VLJ38_19980"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU41874.1"
                     /translation="MATTRRATGDKGVARPSSEPRPPPGTGSASAPSRRSHSSDLNSD
                     EVDTAGRKQRPPHVASAPPPAAETGVLAVEAAQTAEVLESDEAEISEADISDADDAEE
                     SPKTDPEPVARALVDVAVPDSAPPSIPSAAAAPAGTDGRGGVPVLPGHVIANRYEVLG
                     LLGEGGMGIVYRCRDKPSGQIVAIKRVIPPPGNLANEYVMWFYKEARALAALDHPNIV
                     RAHDFGQLRDGSPFLAMELVSGASLHDLTHARLGFPVIWTIVDQILDALAHAHARGVI
                     HGDLKPSNVLVEPHEGESPFVHVLDFGLAWLRVDAQDERLSGSKPMEFAPHAGAGTPG
                     YMAPEQIQHEMHHVCGATDLYALGCVLYRLLAGKPPFSGESRELLRVHA"
BASE COUNT          237 a          533 c          514 g          218 t
ORIGIN      
        1 gcgcgcgagg cgtagttctc gctcgggatc agacgcagcg tgcgcccttc gagcgcggct
       61 tcgtcgcgaa tcagacgtgc aatctcgggg tcacgttcgg caagcgcggg gtcacgggtc
      121 ggcatggcgc gcggaggcta gcacccgaaa agccgccatg atccctgggt gcattacctt
      181 cgtcccggca acattcaggc tggctggaag gccggaagga gccgccagat ccgcgaaccc
      241 cggagccaga ttcgcgaacc ccgcagccgg acggccaagg ccgggttcgg gcctccaagt
      301 tccgcttctc gactgccgct acgggagtac taagatccgg cgcttagact tcatggcaac
      361 cacccggcgc gccacgggcg acaaaggtgt cgcgcgaccg agctccgagc cgcggccacc
      421 gccgggcacc ggttcggcat cggcgccgtc acgccgttcg cactcgagcg atctgaattc
      481 cgacgaggtg gacaccgcag ggcgtaagca gcgaccgccg cacgtcgcga gcgcgccgcc
      541 acccgccgcc gagacgggcg ttttggcggt ggaggcggcg cagacggccg aggtgctaga
      601 gagcgacgaa gccgagatct ccgaagccga catctcggac gccgacgacg ccgaggagtc
      661 accgaagacg gatccggagc cggtcgcgcg cgccctcgtc gacgtcgccg tgccggacag
      721 cgcgccgccc agcattccgt ccgcggcggc ggcgcccgcc ggcaccgacg ggcgcggcgg
      781 cgtgccggtg ttgcccggtc acgtcatcgc caaccgttac gaggtgctcg gcctgctcgg
      841 cgagggcggc atgggcatcg tctatcgctg ccgcgacaag ccgagcggac agatcgtcgc
      901 catcaagcgc gtgatcccgc cgccgggcaa tctcgcgaac gaatacgtga tgtggttcta
      961 caaagaggcg cgcgcgctcg cggccctcga ccacccgaat atcgttcgcg cccacgactt
     1021 cggccagctg cgcgacggct cgccgttcct cgcgatggag ctcgtctcgg gcgcgtcgct
     1081 ccacgatctc acgcacgcgc ggctcggctt ccccgtgatc tggacgatcg tcgatcagat
     1141 cctcgacgcg ctcgcgcacg cgcacgcccg cggcgtaatt cacggcgatt tgaagccgtc
     1201 gaacgtgctc gtcgagccgc acgagggcga gtcgccgttc gtgcacgtgc tcgatttcgg
     1261 cctcgcgtgg ctccgggtcg atgcccagga cgagcgcctg agcggctcga aaccgatgga
     1321 attcgcgccg cacgcgggcg ccggcacgcc gggctacatg gcgcccgagc agatccagca
     1381 cgagatgcac cacgtctgcg gcgcgacgga tctgtacgcg ctcggctgcg tgctctatcg
     1441 cttgctggcc ggtaagcccc cgttctcggg cgaatcgcgc gagctgttgc gcgtccacgc
     1501 gt
//
LOCUS       DATIML010001160         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5156161, whole genome shotgun sequence.
ACCESSION   DATIML010001160 DATIML010000000
VERSION     DATIML010001160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5156161"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VLJ38_19985"
     CDS             complement(<1..760)
                     /locus_tag="VLJ38_19985"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSU41875.1"
                     /translation="MRAPAARRLLATVVRAELGIDALRALSWETRGPVPFGLEPRRAR
                     ASHAWPSAELPLPDVNGGPRTARALAAAYGRRETTPLAVAGRALERASSFGLRAPLHA
                     RDDARTFADARASTERFERGAPLGELDGVPLVVKEELNVAGYATRLGTSFMPGTPARE
                     DAVFVARLRRAGAIVLGQTPMTEYGLSPLGVNAHRRMPRNAHDEARLAGGSSTGSAVA
                     VALGLVPFGLGTDGGGSVRVPAAYNGVFGLKPTYG"
     gene            918..>1506
                     /locus_tag="VLJ38_19990"
     CDS             918..>1506
                     /locus_tag="VLJ38_19990"
                     /inference="COORDINATES: protein motif:HMM:NF012563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008184 - glycogen phosphorylase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HSU41876.1"
                     /translation="MSNSPRPSIPVYELPLDPESIRKSFVQQVQYNQGKHPSAATRLD
                     HFMSLARVVRDRMYDRWTRTWQRRDKQQPKVVYYLSLEFLMGRLLEDGLLNLGILDET
                     REALANLGIDISQVLEQEPDAGLGNGGLGRLAACFLDSMATLGIAGMGYGIRYDYGIF
                     RQDIIGGVQQEAPDHWLAFGNPWEIARPERAYKVRF"
BASE COUNT          254 a          545 c          504 g          203 t
ORIGIN      
        1 ggccgtacgt cggcttcaaa ccgaacacgc cgttatacgc tgcgggcacg cggacggacc
       61 cgccgccatc cgtacccaaa ccgaacggca cgagaccgag cgccaccgcg acggcggagc
      121 ccgtcgagct gccgccggcg aggcgcgctt cgtcgtgcgc gttccgcggc atgcgacggt
      181 gagcgttcac gccgagcggc gagagaccgt actcggtcat cggcgtttgg ccgagcacga
      241 tggcgcccgc gcggcgcagg cgcgcgacga agacggcgtc ttcccttgcc ggcgttccgg
      301 gcatgaacga ggtgccgagc cgcgtcgcgt agccggcaac gttcagctct tctttgacga
      361 ctaacggcac gccgtcgagc tcgccgagcg gcgcgccgcg ctcgaagcgc tccgtgctcg
      421 cgcgcgcgtc ggcaaacgtg cgcgcgtcgt cgcgggcgtg gagcggcgcg cgcaagccga
      481 acgacgacgc gcgttcgagc gcgcggcccg cgacggcgag cggcgtcgtc tcacggcggc
      541 cgtacgccgc ggccagggcg cgcgccgtgc gcgggccgcc atttacgtcg ggtagcggca
      601 gctccgccga cggccacgcg tggctcgccc gagcccggcg tggctcgagc ccgaacggca
      661 ccggcccgcg cgtttcccag gacagcgcgc gcagcgcgtc gatgccgagc tcggcacgca
      721 cgaccgtggc gagcaagcga cgggccgcgg gcgcacgcac gcagacgctc aacgcccgga
      781 gggcggcacc tgaaacccga ccgacaccta accgcatgcg aactcgaaaa atggcaacaa
      841 gttcggagac tccggaatcg cgcccgcgtg aagtcctagt ctaggcagca ccgactgggg
      901 ttggtagaac gcagaacgtg tcaaattcgc ccaggcctag catcccggtc tacgagctcc
      961 cgctcgatcc cgagtcgatc cgcaagagtt tcgttcagca ggtccagtac aaccagggca
     1021 agcacccgag cgcggccacg cggctcgacc atttcatgag tcttgcccgg gtcgttcgcg
     1081 atcgcatgta cgaccgctgg acccgcacct ggcagcgccg cgacaagcaa cagcccaaag
     1141 tcgtctacta cctatcgctc gaattcttga tgggccggct cctcgaggac ggcctgctga
     1201 acctcggcat cctcgacgaa acgcgcgagg ccctggcaaa cctcggcatc gacatttccc
     1261 aggtgctcga gcaggagccc gacgcgggcc tcggcaacgg cggcctcggc cgtctcgccg
     1321 cctgcttcct cgactcgatg gccacgctcg gcatcgccgg catgggctac ggcatccgtt
     1381 acgactacgg catcttccgc caggacatca tcggcggcgt gcagcaggag gcgcccgacc
     1441 actggctcgc gttcggtaac ccatgggaaa tcgcgcggcc ggagcgcgcg tacaaggttc
     1501 gcttcg
//
LOCUS       DATIML010001161         1828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5444940, whole genome shotgun sequence.
ACCESSION   DATIML010001161 DATIML010000000
VERSION     DATIML010001161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5444940"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..575
                     /locus_tag="VLJ38_19995"
     CDS             <1..575
                     /locus_tag="VLJ38_19995"
                     /inference="COORDINATES: protein motif:HMM:NF018047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA family protein"
                     /protein_id="HSU41877.1"
                     /translation="PGRLHGDPKDEFERQARASAVIGVPHPIGYTPSVFRTCLIPGKP
                     YSTLSPFQSEPVEANIPKARDLPLAAAAGLWLLAERAVADLTKLHASGLCHGDTELHN
                     FIVCPAPLEILPIDFEGAQERKPEMSDEDWAYWTQRDLDPLLRHAVLIEVSLGAQSGS
                     LAELAAARMDKLFKDPDRFRREIGRRSDLD"
     gene            complement(709..>1828)
                     /locus_tag="VLJ38_20000"
     CDS             complement(709..>1828)
                     /locus_tag="VLJ38_20000"
                     /inference="COORDINATES: protein motif:HMM:NF037084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41878.1"
                     /translation="NGSGKHVNFSFGNATQGNMLDPGDTPHENAQFLVFCSAVIRAVH
                     RHGGLLRAAIASANNDHRLGANEAPPAIISIFLGEMLTDVFEQIKAGGAKSSKMKGTL
                     EIGVDVLPKLPKDTGDRNRTSPFAFCGNRFEFRAVGSSQSITGPLIAVNAAVTESIDF
                     LATKLEAAVASGKTLNHAIQTLLSDVAKESLAVVFNGNGYSAEWHAEAEKRGLPNYKT
                     SVDALPVLEKPEVVQLFEKYQILSPRELHSRYEIYLEQYVKTILVEAKLCAKMAKTQI
                     LPAALRYQKELTGTLPAGGKLGEQIAGLVGELDKGIGTLEAALGHESSGALDECKHLK
                     DKVLPAMSSIRAAADSLEGILADDQWPLPTYQEMLFVR"
BASE COUNT          285 a          621 c          601 g          321 t
ORIGIN      
        1 tcccgggccg cttgcacggc gatcccaagg acgaattcga gcgacaggcc cgtgcgagcg
       61 ccgtgatcgg cgtgccgcat ccgatcggct acacgccgag cgtctttcgc acgtgcctca
      121 ttccgggcaa gccctactcg acgctgtcgc cgttccagag cgagccggtc gaggcgaaca
      181 tccccaaggc gcgcgatcta ccgctcgccg cggccgccgg cctctggctc ctcgccgaac
      241 gcgccgttgc cgatctcacg aagctccacg cgagcggcct gtgtcacggc gatacggagc
      301 ttcacaactt catcgtctgc cctgccccgc tcgagatcct cccgatcgat ttcgaaggcg
      361 cgcaggagcg caagcccgag atgtcggatg aggactgggc ctactggacc cagcgcgatc
      421 tcgatccgct gctccgccac gccgtgctga tcgaggtgag cctcggcgcg caaagcggca
      481 gcttggccga gctcgcagcg gcgcgcatgg acaagctgtt caaggatccg gaccgcttcc
      541 ggcgcgagat cgggcgccgc tccgatctcg actgagccgc acgcgaacca ccccgcacag
      601 cgcgcgccgg gcgagtgacg cgcacaaaaa gcgacggagc gagcagccgt atgaccgctc
      661 gctccgtccg cccgctcacg acgcggggct aacgacgctc acttccgctc agcggacgaa
      721 gagcatctct tggtacgtcg gcagcggcca ctggtcgtcc gccaggatcc cttcgaggga
      781 gtcggcagcc gcacggatcg agctcatggc cggcagcacc ttgtccttca ggtgcttgca
      841 ttcgtcgagc gcgccgctcg attcgtgtcc gagcgccgcc tcgagcgtgc cgatgccctt
      901 gtcgagctcg ccgacgagac ccgcgatctg ctcgccgagc ttgccgccgg cggggagcgt
      961 acccgtgagc tccttctgat aacggagcgc ggcgggcagg atctgcgtct ttgccatctt
     1021 cgcgcagagc ttggcctcga cgaggatcgt cttcacgtac tgctcgagat aaatctcgta
     1081 gcggctgtgg agctcgcgcg ggctcaagat ctggtacttc tcgaagagct gcacgacctc
     1141 gggtttctcg agcacgggca gcgcgtccac ggacgtcttg tagttcggca gcccgcgctt
     1201 ctccgcttcg gcgtgccact cggccgagta gccgttgccg ttgaagacga ccgcgaggct
     1261 ctccttcgcc acgtccgaga gcagcgtctg gatcgcgtgg ttcagcgtct tcccgctggc
     1321 cacggcggct tcgagcttcg tcgcgaggaa gtcgatcgac tcggtgaccg cagcgttcac
     1381 ggcgatgagc gggcccgtga tcgactggct cgagcccacg gcgcggaact cgaagcggtt
     1441 gccacagaag gcgaacgggc tcgtgcggtt gcggtcgccc gtgtccttcg gcagcttcgg
     1501 cagcacgtcc acgccgattt cgagcgtgcc cttcatcttc gacgacttgg cgccgcctgc
     1561 tttgatctgc tcgaagacgt cggtgagcat ctcgccgagg aagatcgaga tgatcgcggg
     1621 cggggcttcg ttcgcgccga ggcggtgatc gttgttggcc gacgcgatcg cggcgcgcaa
     1681 gaggcccccg tgacggtgaa cggcacgaat cacggcgctg cagaacacga ggaactgcgc
     1741 gttttcgtgc ggcgtgtcgc ccgggtcgag catgttaccc tgggtcgcgt tgccgaacga
     1801 gaagttgacg tgcttgcccg agccgttg
//
LOCUS       DATIML010001162        10398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3130631, whole genome shotgun sequence.
ACCESSION   DATIML010001162 DATIML010000000
VERSION     DATIML010001162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10398
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3130631"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1353)
                     /locus_tag="VLJ38_20005"
     CDS             complement(<1..1353)
                     /locus_tag="VLJ38_20005"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HSU41879.1"
                     /translation="MRAPGFRTLLVAWAASTVTSAYALKLAAEPSPTVAAVTPPRLLQ
                     TPAVELPAGEAPRAPVSVELELTIDASGRVASARVTSSGGADFDEKALSAARAFEFEP
                     ARRGDEAVAVTIGYRYVFPAVDVPDASAEPPASTPTAAPPPPSASAASAPMPAPSPEL
                     ETFEATAEVEAPPRETTKRSIPEAELTKIPGTRGDALRAIEVLPGVARTGVGDGTPIV
                     RGAGSDESQTYLDGIPVPFLYHFGGVTSFFNSRLLSRVDLYPGNFSSRFGRVTGGVID
                     VRARDPKSDGFHGNFDLNLIDASAEVEAPIGKDTSFALAGRRSVIDLVYSSLVPKDTF
                     SVVTAPVYYDYQGIFSHRFGAHHRLRVLAYGSHDALKLVFNDPNEQDPGLTGSVQGAL
                     GFHRVQAELHSDFAPGLSQDVTVAVGRIDSLQRFGALDQIFGGEEVHARGEWNFELTQ
                     S"
     gene            complement(1478..2566)
                     /locus_tag="VLJ38_20010"
     CDS             complement(1478..2566)
                     /locus_tag="VLJ38_20010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41880.1"
                     /translation="MSRTKAKKTQRGAEERPVFVESVPPAMVAEVFEVAGADDDVIVS
                     SMPPPPERPHAHGMRPLSIPPAPHPPRPLSMPPAPHRARPSAPPPASVHARVLAPDTL
                     ELTPDTLELAPEDLEPVESSSLPTETRTALLTPLPTEASVRPSRPRVAHRAWLLVGGV
                     ALTLGVAVGVRLRAAEPHREAPASAMVRPRATATVATASAQHADVSAPGAPDGVVTAP
                     DPPNGAVTAPAPVAPDDVSPAASSASKPLASGEASSATASAPAHLYGEPIAAAADDKP
                     FDAQAASAAITAAFGRAAACRGPNDPTGSVTATLTYAPSGRVTTATVSGAFAGTPIGG
                     CIASALRGARVPPFSGERLTVRRTTELH"
     gene            2761..3201
                     /locus_tag="VLJ38_20015"
     CDS             2761..3201
                     /locus_tag="VLJ38_20015"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSU41881.1"
                     /translation="MYSRIGIAVALGISLAACHSTPKDTAASDKSATATAPVKELSVP
                     EVAGLIQAKTATVVDANNSETREKMGVVPGAVLLTSYHDYALSELPAAKDTKLVFYCG
                     GTMCRASDSAAERAAQAGYADVSVMRAGIKGWKDAGKTTEMPRS"
     gene            complement(3233..5020)
                     /gene="atzF"
                     /locus_tag="VLJ38_20020"
     CDS             complement(3233..5020)
                     /gene="atzF"
                     /locus_tag="VLJ38_20020"
                     /EC_number="3.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF006043.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004039 - allophanate hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase"
                     /protein_id="HSU41882.1"
                     /translation="MTSAPSLEVATLAAGYATGALEPRAVLDFSYAALEKRDLRPIWI
                     EVVPKADAVALLEHALERRARGEDLPLLGVPFAIKDNIDLKGLPTTAGCPAFARAPSE
                     HAFAVARLIEAGAIPLGKTNLDQFATGLVGTRSPYGVCSSAFDERYVSGGSSSGSALA
                     VAHGIVSFALGTDTAGSGRVPAAFNNLVGWKPTRGLVSTRGVVPACRSLDCVSVFAAS
                     VPDAARVMAVLTAFDPLDPFSRPAAASKSAVATIGVPAELEFFGDTAYAELFADAVLR
                     VRALGVRVVPIDLEPFLAAARLLYGGPWVAERYAAVGEFIDAHPGDVHPVVREIVQGG
                     RSTSAAAAFRGTYRLAELKRAADRTFDEVDALLLPTAPTHPTVEATLADPIEINSRVG
                     RYTNFVNLLDLSALAVPAGFTPERRPFGVTLVGPAFADDALARLGYSLHRAAGATFGA
                     TGAPLADAPLGRTLPNDHVLLAVVGAHLQGQPLNHQLTSRGATLARTLRSANDYRLYA
                     LAGTTPPKPGLVRTPGFAGPGIELEVWSLTLSAFGSFVAEVPAPMVIGTVELEDATRV
                     KGFLCEPSALEASSEITTFGGWRAYLASR"
     gene            complement(5017..8607)
                     /gene="uca"
                     /locus_tag="VLJ38_20025"
     CDS             complement(5017..8607)
                     /gene="uca"
                     /locus_tag="VLJ38_20025"
                     /EC_number="6.3.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004847 - urea carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea carboxylase"
                     /protein_id="HSU41883.1"
                     /translation="MFKKVLIANRAEIACRVERTLRRMGVRSVAVYSEADRHARHVLE
                     ADEAVCVGPAPAAQSYLNVPAILDAIRRTGAEAVHPGYGFLSENAAFAETIEAEGVAF
                     LGPTPAQIRGFGTKHGARAIATELGVPLLPGTGLLADVAEAKLSAERIGFPVILKSTA
                     GGGGIGMQLCRDSARLAEQFESVRALAQKNFGDGGVFLERYVDRARHVEVQIFGDGRG
                     RVVALGERDCSAQRRHQKVIEETPAPRLRGAVREALLAAAVKLGAAVGYRSAGTVEFV
                     YDDASEHFYFLEVNTRLQVEHPVTEAVTGLDLVEWMIRVGAGEGLPASVPEPSGHAIE
                     VRLYAEDPARGFRPSAGLITEAVFPGDARVDGWVERGSTVPAFYDPMVAKIITHGQTR
                     DDALGKLAVALDQTRIGGIETNLEYLRALVRDASVTRGEVTTSTLGAFAFDSRTLEVL
                     APGTLTTVQDYPGRLGYWDIGVPPSGPMDTLSFRLANRAVGNPEGAPALELTVSGPTL
                     KFACDATVALAGARMTATLDGEPVAYHRPVSVRPGQTLAIGSVKGPGCRAYLAVRFGF
                     DVPEYLGSRSTFTLGGFGGHGGRALRKGDVLHVAAPVVLADEPRALEPALVPELTDEW
                     TLGVVYGPHGAPDFFTPNDIRTFFETAWEVHYNSARTGVRLVGPKPEWARSDGGEAGL
                     HPSNIHDNAYAVGTVDFTGDMPIILGPDGPSLGGFVCPATVAHAELWKLGQLKPGARV
                     RFLPFEIEEAVGLDAAVSEAVVARSSLPRRPLARKQPENAVLRELPADGERPRVVYRP
                     SGDRYLLVEYGPLVLELSLRFRVHALWEWLGRERIDGIIDVTPGIRSLQVHYDATRLP
                     LARLLEVLERAETELPGVDAMRVPTRIVKMPLSWDDPQTQLAIEKYMQSVRRDAPWTP
                     SNLEFIRRINGLEDLEAVKRVVFDASYLVLGLGDVYLGAPVATPLDPRHRLVTTKYNP
                     ARTWTPENAVGIGGAYLCIYGMEGPGGYQFVGRTLQVYNRFRETPAFTRGKPWLLRFF
                     DQIRFFPVGAEELLEMREAFPHGRYELEIGEESFGLADYQRFLAAEAPSIAAFKATQQ
                     AAFEAERQRWAEQGASAPEAEANDTSTAASAHAGAEIVESHVHGSVWQLRAPVGKRVA
                     RGEVLLVLESMKMEIAIEAPSAGVVLELLVVEGRAVAPGQPLVALRTGDA"
     gene            complement(8648..9289)
                     /locus_tag="VLJ38_20030"
     CDS             complement(8648..9289)
                     /locus_tag="VLJ38_20030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea amidolyase associated protein UAAP2"
                     /protein_id="HSU41884.1"
                     /translation="MALKESMLDASRAAFDQVVASGAGFSKRIARGQVLRIVDLEGNQ
                     AVDTLFYDAHEPSDRYSAVDTIREQGNVYLTTGTRLFSTEGNVLLTIVADTCGRHDTL
                     GGACAAESNQVRYALDKRYMHSCRDTFLLEIQTRRGTLTKRDITHNINFFMNVPVTPE
                     GGLTFEDGISEAGRYVELQAERDVIVLISNCPQLNNPCNGYDPTPIRVLVWNA"
     gene            complement(9292..10023)
                     /locus_tag="VLJ38_20035"
     CDS             complement(9292..10023)
                     /locus_tag="VLJ38_20035"
                     /inference="COORDINATES: protein motif:HMM:TIGR03425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea amidolyase associated protein UAAP1"
                     /protein_id="HSU41885.1"
                     /translation="MTRSEERRPLLAEQLRGGQMWSRVFKRGETLKLTDLEGGASVAA
                     LFFNADQPLERYNMPDTLKAQHIARLTRGNVLYSDMGRVLCSVIADSAGWHDTITGHQ
                     RADGLRAKYGEGSYQALRNDFFRNTRDNFLIELGKYGLGKRDLHANVNFFVKVVADLE
                     GALKWAPVTHAGASVELRAELNVLAILSNTPHPLDPSPRYAPKPVGLDIFQGAPAGAD
                     DACRHSCAENERGFALTEREFLGVS"
BASE COUNT         1658 a         3608 c         3567 g         1565 t
ORIGIN      
        1 cgactgcgtc agctcgaagt tccattcgcc acgggcatgc acttcttccc cgccgaagat
       61 ctggtcgagc gccccgaagc gttggagcga atcgatcctg ccgaccgcga cggtcacgtc
      121 ctggctcagc cccggcgcga agtcggagtg cagctcggct tgcacgcgat gaaagccgag
      181 cgcgccttga acgctgccgg tgagccccgg gtcctgttcg ttcggatcgt tgaagacgag
      241 cttgagcgcg tcatgactgc cgtaagcgag gacgcgcagg cgatgatgcg ccccgaagcg
      301 atggctgaag atgccctgat aatcgtagta aacgggagcc gtcacgaccg agaacgtgtc
      361 ttttggcacg aggctcgagt acacgaggtc gatgaccgaa cgccgccccg cgagcgcaaa
      421 gctcgtgtct ttgccgatgg gcgcttccac ctccgcggac gcgtcgatca agttgagatc
      481 gaagttgccg tggaacccgt cgctcttcgg atcgcgcgcg cgtacgtcga tcacgccgcc
      541 cgtgacgcgc ccgaagcgtg acgaaaagtt gccggggtag agatcgacgc gcgacagcag
      601 gcgcgagttg aagaaactcg tgacgccgcc gaagtggtac aggaacggca cggggatgcc
      661 gtcgaggtac gtctggcttt cgtcgctgcc ggcgccacgc acgatcggcg tgccgtcgcc
      721 gaccccggtg cgcgcgacgc cgggcaagac ttcgatcgcg cgcagcgcgt cgccgcgcgt
      781 gcccggtatt ttcgtgagct ccgcctcggg aatcgagcgt ttcgtcgttt cgcgcggcgg
      841 cgcttccact tcggccgttg cctcgaacgt ttcgagctcg ggactcggcg ccggcattgg
      901 agcggacgcg gcgctcgcgc tgggcggcgg cggcgcggcg gtgggcgtcg aggccggcgg
      961 ctctgccgac gcgtccggca cgtcgactgc cggaaagacg tagcgatacc caatcgtgac
     1021 ggcgacggct tcgtcaccgc ggcgcgcggg ctcgaattcg aaagcgcgcg ccgccgacag
     1081 tgccttctcg tcgaaatcag cgccgcccga gctcgtcacg cgcgcgctcg cgacgcggcc
     1141 gctcgcgtcg atcgtgagct cgagctcgac gctcacgggt gcacgcggcg cctcacctgc
     1201 cggtagttcg actgcgggtg tctggagcag gcgcggcggc gtcacggcag cgaccgtcgg
     1261 cgacggttcc gcggcgagct tcagtgcata agcgctcgtg acggtgctcg cggcccacgc
     1321 gacgaggagt gttcgaaagc cgggagctcg catgaaagcc tggtcccggc gccgcgtggc
     1381 gtccgagatt cgaccctccg tgcccggctg cgtacgaacc gttcaagctg cgccaggatt
     1441 tcgagtcgcc cgctggcgac gccaagcacg cgcgagctca gtggagctcg gtcgtgcgcc
     1501 tgacggtgag tcgctcgccg gaaaacggcg gtacgcgcgc gccgcgcaga gcggacgcga
     1561 tgcacccgcc gatcggcgtg ccggcgaacg cgccgctcac ggtcgctgtc gtgacgcggc
     1621 ccgagggcgc gtaagtgagc gtcgccgtca cgctgccggt cggatcgttc ggaccacggc
     1681 acgccgccgc tcgcccgaac gccgccgtga tcgcggcgct cgctgcttgc gcgtcgaaag
     1741 gcttgtcatc ggcggcggct gcgattggct cgccgtaaag gtgcgccggc gcgctcgcgg
     1801 ttgcgctcga cgcctcgccg gaagcgagcg gtttcgaagc cgaagacgct gcgggcgaga
     1861 cgtcatcggg agcgaccggg gccggcgcag tgacggcacc gttcggcggg tccggcgcgg
     1921 tgacgacgcc gtccggcgcg ccgggtgccg atacgtcggc gtgctgcgcg gacgccgtcg
     1981 cgaccgtcgc cgtcgcgcgc ggacgcacca tcgcgctcgc cggtgcctcg cggtgaggct
     2041 ccgcggcgcg cagcctcacc ccgaccgcca ccccgagcgt cagcgcgact ccgccgacca
     2101 aaagccacgc gcggtgcgcg accctgggcc gtgacggacg cacggaagct tcggtcggca
     2161 acggcgtcag cagcgccgtc cgcgtctccg tcggcaaact cgaagactcg accggctcca
     2221 aatcttccgg cgcgagctcg agcgtgtccg gcgtgagctc gagcgtgtcc ggcgcgagca
     2281 cgcgtgcatg gacactggcg ggcggtggtg cgctcggtcg cgcgcggtgt ggcgccggcg
     2341 gcatcgagag cggtcgcggc gggtgcggcg ccggtgggat cgagaggggc cgcatcccgt
     2401 gcgcgtgggg tcgctccggc ggcggcggca tcgacgacac gatcacgtcg tcatcggccc
     2461 ccgcgacctc gaacacctcc gcgaccattg caggcggcac cgactcgacg aacacggggc
     2521 gttcttcggc tccgcgctgc gtcttcttcg ctttcgtacg gctcacacgt tgagtacgag
     2581 acgggccttt ttcgccggcc accccggaat taccaacgag acgcgagcgt ttagtcacgg
     2641 tcctgcgggt cggatgattg ctctttccac ccataccgcc tggctgttga attaccccgc
     2701 ccaggcgccg ccggcaagtt tgcccggtgc tagccttcga ccggaaacag gagaaaagcc
     2761 atgtactctc ggattggtat cgccgtcgcc ctcggcatca gcctcgccgc gtgtcactcg
     2821 acccccaagg acaccgccgc cagcgacaag tccgccacgg cgaccgcccc cgtgaaggag
     2881 ctctccgtgc ccgaggttgc gggcctcatc caagcgaaga cggccacggt cgtggatgcg
     2941 aacaacagcg agacgcgcga gaagatgggc gttgtccccg gcgcggtgct gctcacgagc
     3001 taccacgatt acgcgctcag cgagctcccg gccgcgaaag acacgaaact cgtgttctac
     3061 tgtggcggta ccatgtgccg agcctccgac agcgctgccg agcgtgcggc gcaggcgggc
     3121 tacgcggacg tgagcgttat gcgcgccggc atcaagggct ggaaggacgc cggcaagacg
     3181 acggaaatgc cccggagcta gctgctcttg ctcaccggga agctgttctt gctcaccggg
     3241 aagccaaata ggcacgccag ccgccgaacg tcgtgatttc gctgctcgct tcgagcgccg
     3301 agggctcgca caagaacccc ttcacgcgcg tcgcgtcttc gagttccacg gtaccgatca
     3361 ccatcggtgc cggcacctcc gctacgaacg agccgaacgc ggatagcgtg agcgaccaca
     3421 cctcgagctc gatgccgggc cccgcgaagc ctggcgtgcg cacgaggccg ggcttcggcg
     3481 gcgtggtgcc ggccaaagcg tagagacggt aatcgttggc ggaacgcaag gtacgcgcga
     3541 gcgtcgcgcc tcggctcgtc agctggtgat tcaggggctg gccctgcaag tgcgcgccga
     3601 cgacggccaa taagacgtgg tcgttcggga gcgtccgtcc gagcggcgca tccgcgagcg
     3661 gcgcccccgt cgcgccgaac gtcgcgccgg cagcgcggtg gagcgagtag ccgaggcgag
     3721 cgagcgcgtc gtcggcgaag gcggggccga cgagcgtcac gccgaacggc cgccgctcgg
     3781 gcgtgaaacc cgccgggacg gcgagcgcgg agagatcgag caggttcacg aagttcgtgt
     3841 agcggccgac ccgcgagttg atttcgatgg gatcggcgag cgtcgcctcg acggtcgggt
     3901 gcgtcggcgc cgtcggcagg agcagcgcgt cgacttcgtc gaaggttcta tccgcggcac
     3961 gcttgagctc cgcgaggcga tacgtgccac gaaacgcagc ggccgccgac gtcgaacgcc
     4021 cgccttgcac gatctcgcgc acgacggggt gcacgtcccc cgggtgcgcg tcgatgaact
     4081 caccgacggc cgcgtagcgc tcggcgaccc agggtccgcc gtagagcaaa cgcgccgccg
     4141 cgaggaacgg ctcgaggtcg atgggcacga cccgcacacc gagcgctcgc acgcgcagga
     4201 cggcatccgc gaacagctct gcgtacgccg tgtcgccgaa aaactcgagc tccgcgggca
     4261 cgccgatcgt cgcgaccgcg gacttggacg ccgccgcagg ccgtgaaaac ggatcgagcg
     4321 gatcgaacgc cgtgagcacg gccatgacgc gcgcggcgtc gggcacgctc gcggcgaaca
     4381 cggagacgca atcgagcgag cgacacgccg ggacgacacc gcgcgtgctg acgagaccgc
     4441 gcgtcggctt ccagccgacg aggttattga acgccgcggg aacgcgaccc gaacccgccg
     4501 tatcggtgcc gagcgcaaag ctcacgattc cgtgcgccac ggcgagcgcg gagcccgagc
     4561 tcgatccgcc cgacacgtag cgctcgtcga aggccgagct gcaaacgccg tacggcgagc
     4621 gcgtccccac gagcccggtc gcgaactgat cgaggttcgt cttgccgagc ggaatcgcgc
     4681 cggcctcgat cagccgagct accgcgaagg cgtgctcgct cggtgcacgg gcgaacgcgg
     4741 ggcagccggc cgtcgtcggc aggcccttca gatcgatgtt gtctttgatc gcgaacggca
     4801 cgccgaggag cggcaaatcc tcgccgcgcg cccgtcgctc gagcgcgtgc tcgagtaaag
     4861 cgacggcatc ggctttcggc acgacctcga tccaaatcgg ccgaaggtcg cgcttttcga
     4921 gcgccgcgta cgaaaaatcg agcacggcac gaggctcgag cgcgcccgtg gcgtagcccg
     4981 ccgcgagcgt cgcgacctcg agtgacggcg cgctcgtcac gcgtcccccg tgcgaagcgc
     5041 gaccagcggc tgccctggcg cgacggcgcg accttccacc accaagagct ccagcacgac
     5101 cccggcggac ggagcctcga tcgcaatctc cattttcatc gattcgagca cgagtagcac
     5161 ctcgccacgc gcgacgcgct tgccgacggg cgcgcgcagc tgccacacgc tgccgtgcac
     5221 gtgactttcg acgatctcgg cgcccgcgtg cgcgctcgcg gccgtgctcg tgtcgttcgc
     5281 ttccgcttca ggcgctgagg ccccctgctc ggcccagcgc tgccgctcgg cctcgaaggc
     5341 agcctgctgc gtcgccttga acgccgcgat gctcggcgct tccgccgcga gaaagcgctg
     5401 gtagtcggcg agcccgaacg actcctcgcc gatctcgagc tcgtagcgtc cgtgcgggaa
     5461 cgcctcgcgc atttcgagga gctcctcggc gccgaccggg aagaagcgga tctgatcgaa
     5521 gaagcgcaac agccagggct tgccgcgcgt gaaagccggc gtttcgcgga agcggttgta
     5581 aacctgcagc gtgcggccga cgaactgata gccgcccggt ccctccatgc cgtagatgca
     5641 aaggtacgcg ccgccgatgc cgaccgcgtt ttcgggtgtc caggtgcgcg cggggttgta
     5701 cttggtcgtg acgagccggt gtcgcggatc gagcggcgtc gcgacgggtg cgccgaggta
     5761 cacgtcgccc aggccgagca cgaggtagct cgcgtcgaac acgacgcgct tgacggcctc
     5821 gaggtcctcg agaccgttga tgcggcgaat gaactcgaga ttgctgggcg tccacggtgc
     5881 gtcccgccgc acgctctgca tgtacttctc gatcgcgagc tgcgtttgcg gatcgtccca
     5941 cgagagcggc atcttcacga tgcgcgtcgg cacacgcatg gcgtccacgc ccggcagctc
     6001 cgtctccgcg cgctcgagca cctcgagcag ccgcgcgagc ggcaagcgcg tcgcgtcgta
     6061 gtgcacctgg agcgagcgga tcccgggcgt cacgtcgatg atgccgtcga tgcgttcgcg
     6121 cccgagccac tcccagagcg cgtgcacgcg aaacctgagc gaaagctcga gcacgagcgg
     6181 cccgtactcg acgagcaagt agcgatcgcc cgacggccga tacacgacgc gcgggcgctc
     6241 gccgtcggcg ggaagctcgc gcaacacggc attttccggc tgctttcgcg cgagcggccg
     6301 gcgcggcagc gacgagcgcg ccacgacggc ctccgacacc gccgcgtcga gcccgactgc
     6361 ctcctcgatc tcgaacggca agaagcgcac gcgcgctccc ggcttcagct ggccgagctt
     6421 ccagagctcg gcgtgcgcga ccgtcgcggg gcacacgaag ccgccgaggc tcggtccgtc
     6481 ggggccgagg atgatcggca tgtcgcccgt gaagtccacg gtaccgacgg cgtacgcatt
     6541 gtcgtgaatg ttcgaggggt gcaggcccgc ttccccgcca tcggaccgcg cccactcggg
     6601 cttcggtccg acgagcctca cgcccgtgcg cgcggagttg taatgaactt cccacgccgt
     6661 ctcgaagaac gtgcggatgt cgttcggcgt gaaaaagtca ggggcgccgt gcgggccgta
     6721 cacgacgccg agcgtccact cgtcggtgag ctcgggcacg agcgcgggct cgagggcgcg
     6781 cggctcgtcg gcgagcacga cgggcgccgc gacgtggagc acgtcacctt tgcggagcgc
     6841 gcgcccaccg tgcccgccga agccgccgag cgtgaacgtc gagcggctgc ccaggtactc
     6901 gggcacgtcg aaaccgaagc gcaccgccag gtaggcgcgg cagcccggac ctttcacgct
     6961 accgatcgcg agcgtctgcc ctgggcgcac gctgacgggc cggtgatacg cgacgggctc
     7021 gccgtcgagc gtcgccgtca tccgcgcccc ggcgagcgcg accgtggcgt cgcacgcgaa
     7081 cttgagcgtc ggacccgaaa cggtgagctc gagcgccggc gcgccctcag gattgccgac
     7141 cgcgcggttg gcgagccgga agctcagcgt gtccatcggc ccggacggcg gcacgccgat
     7201 gtcccagtaa ccaagccgcc ccggataatc ctgcaccgtc gtgagcgtgc cgggagcaag
     7261 cacctcgagc gtgcgactgt cgaaggcgaa ggcgccgagc gtcgaagtcg tgacctcccc
     7321 gcgcgtgacg ctcgcgtcgc gcacgagcgc gcgaaggtat tcgaggttcg tctcgatgcc
     7381 gccgatgcgt gtctggtcga gcgcgaccgc gagtttgccg agcgcgtcgt cgcgggtctg
     7441 gccgtgggtg atgattttgg cgaccattgg gtcgtaaaac gccggcacgg tgctgccccg
     7501 ttccacccag ccgtcgacgc gcgcatcgcc cgggaacacg gcttcggtga tgagccccgc
     7561 gctcggccga aatccccgcg cgggatcctc ggcgtaaagc cgcacttcga tcgcatgacc
     7621 gctcggctcg ggcacgctcg cgggcaggcc ctcccccgcc cccacgcgga tcatccactc
     7681 cacgagatcg agccccgtca cggcttccgt cacggggtgc tcgacctgaa gccgcgtgtt
     7741 cacctcgaga aaataaaagt gctcggaagc gtcgtcgtac acgaactcga cggtgccggc
     7801 cgagcggtag cccacggcgg cgccgagctt caccgccgcg gcgagcagcg cttcgcgcac
     7861 ggcaccgcgc aagcgcggcg cgggcgtctc ttcgatcacc ttctgatgcc ggcgttgtgc
     7921 cgaacaatcc cgctcgccga gcgcgacgac gcgcccgcgc ccgtcgccga aaatctgcac
     7981 ctcgacgtgc cgcgcgcgat cgacgtagcg ctcgaggaac acgccgccgt cgccgaagtt
     8041 cttctgcgcc agcgctcgca ccgactcgaa ctgctcggcg agccgcgccg agtcacggca
     8101 aagctgcatg ccgatgccgc cgccgcccgc cgtactcttc aaaatcacgg gaaagccgat
     8161 gcgctccgcc gagagcttcg cctcggccac atcggcgagc agccccgtgc cgggcaaaag
     8221 cggcacgccg agctccgtcg cgatcgcgcg cgcgccgtgc ttggtcccaa atccgcggat
     8281 ctgcgcaggc gtcggtccca gaaatgcgac gccctcggct tcaatcgtct cggcaaacgc
     8341 ggcgttctcg ctcaaaaacc cgtagcccgg gtgcaccgct tccgcgcccg tgcgccggat
     8401 cgcgtccaaa atcgccggca cgttgaggta gctctgggcg gccggcgccg gccccacgca
     8461 caccgcctcg tccgcttcga gcacgtgacg cgcgtgccgg tccgcctccg aatacacggc
     8521 gaccgagcgc acgcccatgc gccgtaacgt gcgctccacg cgacaagcga tttcagcgcg
     8581 gttagctatg aggacttttt tgaacatggt ggcgtgggcg gggtcctgaa tttggcttgc
     8641 ttctgggtca agcgttccac accaggactc gaatgggcgt ggggtcgtag ccgttgcagg
     8701 ggttgttcag ctgcgggcag ttggagatga ggacgatcac gtcgcgctcg gcttggagct
     8761 cgacgtaacg gcccgcctcg ctgatgccgt cctcgaaagt gagcccgccc tcgggcgtga
     8821 ccggcacgtt catgaagaag ttaatgttgt gcgtgatgtc gcgcttcgtg agcgtgcccc
     8881 gccgcgtctg gatctcgagc aagaacgtgt cgcggcagct gtgcatgtat cttttgtcga
     8941 gcgcgtagcg cacctggttc gattcggccg cgcaagcgcc gccgagcgtg tcgtgccgcc
     9001 cgcacgtgtc cgcgacgatc gtgagcagca cgttgccctc ggtcgagaac aggcgcgtcc
     9061 ccgtcgtcag atagacgttg ccttgctcgc ggatcgtgtc gacggcgctg tagcggtcgg
     9121 acggctcgtg cgcgtcgtaa aaaagcgtat cgacggcttg gttgccctcg aggtcgacga
     9181 tgcgcagcac ctgcccgcgc gcgatacgct tgctgaaccc ggcgcccgaa gcgacgactt
     9241 ggtcgaacgc cgcgcgggac gcatccagca tgctctcttt gagtgccatg gttagctgac
     9301 ccccaaaaac tcacgctccg tgagcgcgaa accgcgttcg ttctcggcac acgagtggcg
     9361 gcacgcgtcg tccgcaccgg ccggcgcgcc ctgaaaaatg tcgagcccga cgggcttcgg
     9421 cgcatagcgc ggcgacggat cgagcgggtg cggcgtgttc gacaagatcg cgagcacgtt
     9481 gagctcggcg cggagctcca ccgaggcccc agcgtgggtc acgggcgccc atttgagcgc
     9541 gccctcgaga tccgccacga ccttcacgaa gaaattcacg ttcgcgtgca agtcgcgctt
     9601 accgaggccg tacttgccga gctcgatcaa aaaattgtcg cgcgtattgc ggaagaagtc
     9661 gttacggagg gcctggtagc tcccctcgcc gtatttcgca cgcaagccat cggcgcgctg
     9721 atgccccgtg atggtgtcgt gccaaccggc gctgtcggcg atcacggaac agagcacgcg
     9781 ccccatgtcc gagtagagca cgttgccgcg agtcagccgc gcgatgtgct gcgccttgag
     9841 cgtgtctggc atgttgtaac gctcgagcgg ctgatcggcg ttgaagaaca acgccgccac
     9901 gctcgcgccg ccctcgagat ccgtcaattt caaagtctcg ccgcgcttga acacgcgcga
     9961 ccacatctgg cccccgcgca gctgctccgc gagcagcggg cgccgctctt ccgacctcgt
    10021 cacgttcgac atcgacacac acctccgcag cacacccacg caacgggtga gccactgact
    10081 cggtgccggg tcgtcccggc gctcgcccgc tcgaaccgcc gccggactgg gccgcaagct
    10141 cggaccgggt cgtcccggtc aggcgcctct caccctagcg gcaccgatgt ttcgcgtagg
    10201 tttcggtgtg atctttctga cggccttgag cggcttacgc cgcgcgcccg cgccggaaca
    10261 cgtcggggcc gtgaatcagc tcttcgagcc gctgcttggt cgcgaggaag tggccggaga
    10321 gaaactgcgc gggcgagcgc gggcgagcga cggggacgtc gatgatttcg acgatgcggc
    10381 cggggttcgc gccgagca
//
LOCUS       DATIML010001163         4345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5445865, whole genome shotgun sequence.
ACCESSION   DATIML010001163 DATIML010000000
VERSION     DATIML010001163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4345
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5445865"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VLJ38_20040"
     CDS             complement(<1..392)
                     /locus_tag="VLJ38_20040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41886.1"
                     /translation="MALSILGQRLSPELCGVLDDAVGVMTLADPRIWPLKLTRVVGSY
                     GGFLAALSAGTLAENEARIGPWACVDASKVLCALHAELDGRQDDLSYVREVLAAYRKK
                     HRFVWGFGTPYRGRDERVIAFRRCMERRG"
     gene            complement(683..2113)
                     /locus_tag="VLJ38_20045"
     CDS             complement(683..2113)
                     /locus_tag="VLJ38_20045"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU41887.1"
                     /translation="MALTAGTKFDSDLPARLDRLPWSAWHWRVVIALGVTWMLDGLEV
                     TLVGAIGPVLKESDTLHLSDGQIGATASSYLAGAIAGALVFGRLTDLLGRKRLFLVTL
                     SLYLSATLATAFAWNFASFAAFRLLTGAGIGGEYAAINSAIDELLPARVRGRADLAIN
                     STYWLGTALGALVTLPLLNAALLPHRIGWRLVFALGASIGLVILFVRKHVPESPRWLL
                     LHGRVPEAEGVVKEIEAAVGHGRDEPLPAPGPPSKLEAKGSVTFTAIAKVLLQRHLRR
                     TLLGLTLMIAQAFAYNGVFFTYALVLSRFYGVPGAHVGYYLLPFAAGNLLGPLFLGHL
                     FDSVGRRPMIALTYGLSGVLIAVAGFGLAHAWLTAASQTILWCAVFFVASAAASSAYL
                     TVSELFPVELRGMAIALFYAVGTAAGGLLAPALFGALLDTGRRENVFVGYLVGAVLMV
                     VAAVVAAILGVSAEGKSLETLSELER"
     gene            complement(2146..2982)
                     /locus_tag="VLJ38_20050"
     CDS             complement(2146..2982)
                     /locus_tag="VLJ38_20050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HSU41888.1"
                     /translation="MKWERDHESPDVIDQRGRGGGGMGLLGPLLSIGSRFGIGGIVVA
                     AALYFGAQFLFSGPASRVAGSESQPATQGDDTRAHFAGFVLDDVQATWSRIFAERGAQ
                     YRHAKLVLYTDQTRTACGFGSAAMGPFYCPNDERVFLDLGFFDELSHKLGAPGDFAQA
                     YVIAHEVGHHVQHLRGEDRGEHSEGATGGSVRLELQADCYAGIWARASKQQNLLEQGD
                     IEEALGAAAAVGDDRLQRNSAGAVNPEKWTHGSSKERAQWFRRGLEQGTFEACDTSKG
                     LR"
     gene            complement(2979..3854)
                     /locus_tag="VLJ38_20055"
     CDS             complement(2979..3854)
                     /locus_tag="VLJ38_20055"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU41889.1"
                     /translation="MKRIGFVGLGTMGTGMAKNLANKGYPLSVWNRSPARASELGFDN
                     APSPRALAERSDVVITCVADPNAVERVVFAEDGVLAAARPGLRYVECSTVSPTLVRRI
                     AAAFSERGAASLEAPVTGSKAGAANGTLLFMTGGPAALHEELEPLLLAMGSRAIRCGE
                     SGQGALMKLLGNTLISFMLEGLCEALVVGQKGGLEIAQVLEVIAASGFSSPYFAFKGQ
                     AIRERNFDPQFSIDLLVKDQTLMLAEAAEQRTPLPALAAVREVFQAARAQGLGRDDIA
                     GVIRVLERAAGRSDA"
     gene            complement(4012..>4345)
                     /locus_tag="VLJ38_20060"
     CDS             complement(4012..>4345)
                     /locus_tag="VLJ38_20060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41890.1"
                     /translation="NGSTFRMIPVIFRKEKLREVEGQGAEAQAAALKVARVEAAAVLG
                     FVSAVGACGGYLIPRSFGASIHATGTPVAALGGFLAFYATCVVVTWVNYLRKTPVSAA
                     EPQFAAEV"
BASE COUNT          772 a         1436 c         1491 g          646 t
ORIGIN      
        1 ccccggcgtt ccatgcagcg gcggaatgca atcactcgct cgtcgcggcc acgatagggc
       61 gttccgaagc cccaaacgaa ccggtgcttt ttacgatacg cggccagcac ctcgcgaacg
      121 tacgagagat cgtcttggcg cccgtcgagc tcggcgtgta aggcacacaa tactttggaa
      181 gcgtcgacgc acgcccaggg cccaatgcga gcttcgtttt ccgccaacgt gccggcggaa
      241 agcgcggcca agaacccgcc atacgatccc acgacacgtg tcagcttgag cggccaaatg
      301 cgtggatcgg cgagtgtcat gacacccaca gcgtcatcga ggacaccaca aagctcgggt
      361 gacagacgct gcccgaggat cgaaagggcc atcaagctcg tccacgattc gcgtccagca
      421 agctcagcga agacgcgata gccgaaatag cggggctcat cgaaagccca ataagccgtg
      481 cgcgtacgct cggtgagccg cggaagcttc ccgacctccc gctccggtgc gcctgtagca
      541 acggagccgg gtgcaaggtc aaagcggggg tcgagcgcgg ctggttggtt cattggggac
      601 gcgggcggcg gaggtgggtg ccggggcctc cgcgtcccag acggacacac gtggtgccag
      661 ttaagggccc aatgtgagac tttcagcgtt cgagctcgct cagcgtctcg agcgattttc
      721 cctctgccga gacgccgagg atcgccgcga cgacggcggc gacgaccatg agcacggcgc
      781 cgacgaggta gcccacgaag acgttttcac ggcggcccgt gtcgagcagg gcgccgaaga
      841 gcgcgggcgc gagtaggccg ccggccgccg ttccgacggc gtaaaaaagg gcaatggcca
      901 tgccgcggag ctcgaccgga aagagctcgc tcacggtcaa gtacgcggag ctcgctgccg
      961 ccgaggcgac gaagaacacg gcgcaccaca ggatggtctg ggaggcggcg gtaagccacg
     1021 cgtgcgcgag gccgaaaccc gcgaccgcaa tcaacacgcc gctcaggcca taggtgagcg
     1081 cgatcatggg ccggcgcccc acgctgtcga agaggtggcc gaggaagagg ggtccgagca
     1141 ggttgccggc cgcgaacggt aggaggtagt agccgacgtg cgcgcccggt acgccgtaga
     1201 accgcgagag cactagggcg taagtgaaga acacgccgtt ataggcaaag gcctgcgcga
     1261 tcatcagcgt gaggccgagc agggtgcggc gaaggtgccg ctggaggagc actttcgcga
     1321 tggcggtgaa agtgacgctg ccttttgctt cgagcttgga cggtggcccg ggcgcgggca
     1381 gcggctcgtc tcggccgtga cccacggcgg cttcgatctc cttgacgacc ccttcggctt
     1441 cgggcacgcg cccgtgcaag agcagccagc gcgggctctc ggggacgtgt ttgcggacga
     1501 agaggatgac gaggccgatg ctcgcgccta gtgcgaagac gaggcgccag ccgatgcggt
     1561 gcggtagtag cgccgcattc aagagcggca gcgtgacgag cgcgccgagc gcggtgccga
     1621 gccagtaagt gctgttgatg gcgaggtcgg ctctgccgcg cacgcgcgcg gggagcagct
     1681 cgtcgatcgc ggagttgatg gcggcgtatt caccgccaat gcccgcaccc gtgagcaggc
     1741 gaaaggcagc gaacgaggca aagttccacg cgaaggcggt ggccagcgtc gcgctgaggt
     1801 aaagcgacag cgtcacgagg aacagccgct ttctaccgag caaatccgtg agacggccga
     1861 acacgagcgc tccggcgatg gcccccgcga ggtaagaact cgcggtcgcg ccgatttgtc
     1921 cgtcactgag atgcagggtg tctgactcct tcaacacggg gccgatcgcg ccgacgagcg
     1981 tcacctcgag cccgtcgagc atccacgtca cgccgagcgc gatgacgacg cgccagtgcc
     2041 acgccgacca cggcaggcga tccaagcgcg caggcagatc actgtcgaac ttggtcccgg
     2101 cggtcagcgc catggcgcgg gactaagcag gatttgggcc gacgctcagc gtaaaccctt
     2161 cgaagtgtcg cacgcttcga acgtgccctg ctcgagaccg cgccggaacc attgcgcgcg
     2221 ctccttggac gagccgtgcg tccacttctc gggattgacg gctcccgccg agtttcgttg
     2281 caggcgatcg tcgccgacgg cggccgccgc gccgagcgcc tcctcgatgt cgccttgctc
     2341 gagtaggttc tgctgcttgg aagcgcgcgc ccagatgccg gcgtagcagt cggcttggag
     2401 ctcgaggcgt accgagccgc ccgtcgcgcc ctcgctgtgc tcgccgcgat cctcgccccg
     2461 caagtgctgg acgtggtggc cgacctcgtg cgcgatgacg tacgcttgcg cgaagtcgcc
     2521 cggcgcgccg agcttgtgcg aaagctcgtc gaaaaagccg aggtcgagga agacgcgctc
     2581 gtcgttcggg cagtaaaatg ggcccatggc cgcggaaccg aagccgcacg ccgtgcgcgt
     2641 ctggtcggtg taaagcacga gcttggcgtg gcggtactgt gcgccgcgct cggcgaaaat
     2701 gcgcgaccac gtcgcttgca cgtcgtcgag cacgaacccg gcaaagtgcg cgcgcgtgtc
     2761 gtcgccttgc gtcgccggct ggctttcgct ccccgcgacg cgcgaagccg gtccgctgaa
     2821 gagaaactgt gcgccgaaat acagcgccgc cgccacgacg atgccgccaa tcccaaaacg
     2881 cgagccgatg ctcaggagcg gaccgagcag ccccatgccg ccgccgccac gcccgcgttg
     2941 gtcgatgacg tccggactct cgtgatcgcg ctcccacttc atgcgtcgct cctccccgcc
     3001 gcgcgctcga gcacgcgaat gacccccgcg atgtcgtcgc gtccgagccc ttgcgctcgc
     3061 gccgcctgga atacctcacg cacggcggcg agcgcgggca gtggcgtcct ttgctcggct
     3121 gcttcggcga gcatgagcgt ctggtccttc accaacaaat cgatcgaaaa ttgcgggtcg
     3181 aagttgcgct cgcggatggc ttgccccttg aacgcaaaat acggtgagga gaagccggag
     3241 gccgcgatga cttcgagcac ctgcgcgatc tcgagcccgc ccttctgtcc gacgacgagc
     3301 gcttcgcaca aaccctcgag catgaaggag atgagcgtgt tgccgaggag cttcatcagc
     3361 gcgccttggc cgctctcgcc gcagcggatc gcgcgcgagc ccatggcgag cagtagcggc
     3421 tcgagttcct cgtgtaacgc ggcgggaccg cccgtcatga agagcaaggt gccgttcgcc
     3481 gcgccggctt tggagcccgt caccggcgct tcgagcgagg ccgcgccgcg ctcgctgaat
     3541 gccgctgcga tgcggcgcac cagggtgggg gagacggtgc tgcactcgac gtaacggagg
     3601 ccgggccggg ccgcggcgag cacgccgtcc tcggcgaaca cgacgcgctc gacggcgttc
     3661 ggatccgcca cgcacgtgat gacgacatcg gagcgctcgg ccagggcgcg cggtgacggc
     3721 gcgttgtcga atccgagctc gctcgcgcgc gccggcgaac ggttccaaac gctgagggga
     3781 tagcccttgt tggcgagatt tttcgccatg cccgtgccca tcgtgccgag ccctacgaat
     3841 ccgatcctct tcatgctcga tgctcctcgt gcagcatcga gccgaccacg gcggtggtac
     3901 ggcgtcgagc gagcgggtgc tggagcatga cccccgagcc gtgcaagagc cggtccgctc
     3961 ccgcacggcc acgccgcgac ttttcgcctc gggggggtca gcgctgctag ttcaaacctc
     4021 ggccgcgaac tgcggctctg cggcgctgac gggagtcttg cgcaggtagt tcacccaggt
     4081 cacgacgacg cacgtcgcat aaaacgcgag gaagcctccg agcgccgcga ccggcgtccc
     4141 cgttgcgtga atcgacgcgc cgaacgagcg cggaatcagg taaccgccgc acgcaccgac
     4201 cgccgagacg aacccgagca ccgccgccgc ctcgacgcgc gcgaccttga gcgccgcggc
     4261 ttgcgcttcg gcgccttggc cctcgacctc gcgcagtttc tctttgcgga agatgacggg
     4321 gatcatgcgg aaggtggagc cgttg
//
LOCUS       DATIML010001164         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1981287, whole genome shotgun sequence.
ACCESSION   DATIML010001164 DATIML010000000
VERSION     DATIML010001164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1981287"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            339..1649
                     /locus_tag="VLJ38_20065"
     CDS             339..1649
                     /locus_tag="VLJ38_20065"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HSU41891.1"
                     /translation="MTATGGASAAASSGGTAGHGAPATGGAATGGSAGSNVPSGGAAA
                     TGGASASGGANAAGGASNAAGSAGRGRGGAAGRGGSGASGRAGASGNGGSGAGGSAGS
                     SCSGPVGTLSGALAQGIAFMDTDGQRVNAHGGGIIREGDTFYLHGEMFSSTSTDNNFI
                     GFSMYSSKDLATWKNEGVILPQQAKDELGPNRKGERPHIIKCPSTGEFVLYAHAASED
                     YQTDREVVYATSATVNGQYAYKGPLKNSSGTIAAHSDMSAYADETGAYVVTESGHVYT
                     LAADCHSWVSDKSYSAVNGDSGGSESPTVFKAGNTYYWIGSYKTGWRANNNFYSTAPA
                     MSGPWTYQGFVAPVADATDDLSDERTWLTQSTWVEPVTGCQGTVYVYWGDHWDGNQDT
                     TAPGKHNYLATYVFQPLVFDGTKISMPTYHATWKLDVGAGTWSE"
     gene            complement(1657..>2020)
                     /locus_tag="VLJ38_20070"
     CDS             complement(1657..>2020)
                     /locus_tag="VLJ38_20070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU41892.1"
                     /translation="VDDSETIRQRVAGALEAAGFSTLTARDGIEGLVAAQKERPAMVI
                     LDVNMPRMNGLDMLESLDVKSSGLAVLLLTTEVQPSLMARAKKAGAKGWMVKPVNLEQ
                     LVATVRKVIAQVPAAASA"
BASE COUNT          340 a          653 c          714 g          313 t
ORIGIN      
        1 ccgctgtgac tcgatattta cagggtccat gcctgggacg tcagcgcgca tgtgctttgc
       61 tgcagtagtt gcgcgagggc ggcgcgagct ggacaatttt tgtgagcgct ccgcacgctg
      121 acgcggcaac ctgtagacgg gcatcccatg cccacaagat gcagcgttca gcgatcggtt
      181 tcgtcgtcgt cgggtggctc gcagcctgcg gcaatagcgg ctcgagcata ggtgagcccc
      241 gagagcacgg cgccggaacg ggcaacctct cgtccggggg agcgtcgagc ggggccgggc
      301 tgggcggcca cagcgcaacg ggcggctcgg caggttcaat gacggcgacg ggcggcgcgt
      361 ccgccgcggc gtcgagtggc ggcaccgccg gtcacggcgc gccggcaacg ggtggcgcag
      421 cgacgggcgg ttcggcgggc agtaacgtgc cctctggcgg cgcagcggcg acgggcggcg
      481 cgtccgcgag cggtggagcg aatgcagcgg gcggcgcgtc caatgcggct ggcagcgcgg
      541 gtcgaggccg cggtggagct gcgggtcgcg gcggcagtgg cgcgagcggt cgtgccggtg
      601 catcgggcaa cggagggagc ggcgcgggcg gcagcgcggg cagctcgtgt tcggggccgg
      661 tcggtacgct ttcaggcgcg ctcgcgcagg gcatcgcgtt catggacacc gacgggcagc
      721 gcgtgaatgc acacggcggc ggcatcatcc gcgagggtga caccttttat ctccatggcg
      781 agatgttctc gagcacgtcg accgacaaca acttcatcgg tttttccatg tactcgtcga
      841 aggatctcgc gacctggaaa aacgagggcg tgatcttgcc gcagcaggcg aaggacgagc
      901 tcgggccgaa ccgcaaggga gagcgcccgc acatcatcaa gtgtccgagc acgggtgagt
      961 tcgtgctcta cgcgcacgcg gcgtccgagg attaccagac ggaccgagag gtcgtgtacg
     1021 ccacttcggc cacggtgaac ggccagtacg cgtacaaggg cccgctcaag aattcgagcg
     1081 gcacgatcgc tgcgcacagc gacatgagcg cgtacgccga cgagacgggc gcgtacgtcg
     1141 tcaccgagag cggtcacgtc tacacgctcg ccgccgattg ccactcgtgg gtttccgaca
     1201 aatcgtattc ggccgtgaac ggcgactccg gcggctccga gtcgcccacc gtgttcaagg
     1261 cgggcaacac ctattactgg atcggctcgt acaagaccgg ctggcgcgcc aacaacaact
     1321 tttactcgac cgcgccggcc atgagcggcc cctggacgta ccaaggtttc gtcgcgcccg
     1381 tcgccgatgc gaccgacgat ctctccgacg aacgcacctg gctcacgcag agcacgtggg
     1441 tcgagcccgt caccggctgc cagggcaccg tgtacgtgta ttggggcgat cactgggacg
     1501 gcaaccagga cacgaccgcg cccggcaagc acaattacct cgcgacgtac gtgttccagc
     1561 cgctcgtgtt cgacggcacc aagatctcga tgccgacgta ccacgcgacg tggaagctcg
     1621 acgtcggcgc gggcacctgg tccgagtagc gcagccctag gccgacgccg cggcgggcac
     1681 ttgcgcgatc actttgcgca ccgtagcgac gagctgctcg aggttcaccg gcttcaccat
     1741 ccagcccttg gcgcccgcct tcttggcgcg cgccatgagc gaaggctgca cctcggtcgt
     1801 gagcaggagc acggcgaggc ccgagctctt cacgtcgagg ctctcgagca tgtcgaggcc
     1861 gttcatgcgc ggcatgttca cgtcgaggat caccatggca ggtcgctctt tttgcgccgc
     1921 cacgaggcct tcgatgccgt cgcgcgccgt gagggtcgaa aagccggccg cctcgagcgc
     1981 gcccgcgaca cgctggcgga tggtttccga atcgtcgacg
//
LOCUS       DATIML010001165         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1401760, whole genome shotgun sequence.
ACCESSION   DATIML010001165 DATIML010000000
VERSION     DATIML010001165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1401760"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..823
                     /locus_tag="VLJ38_20075"
     CDS             <1..823
                     /locus_tag="VLJ38_20075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41893.1"
                     /translation="ELERLAGADASRARPSLVRIEHDAGSGTYRLTLEVAGQHRELTH
                     TDCRVLLRSAAVISAASVKVDAPPPVVAPVASSPPQAMSSSPSVTRQDAPPVTEPHAR
                     SSEPTRRLHGHVAVGGGIAVGVVPAATPAAEVRGGISRGAWGATLAGRYFAPQSATVE
                     GRVADIRGYGLRAAGVLAPTTWLSVSLGLDIELLVGRGRDGVAVPATDSAWTLAPSAE
                     LAAIPIQNEHLALELAVLGRVALVRPVFEVGGFGALYRVPSLGMAALARGVWRFR"
     gene            855..1466
                     /locus_tag="VLJ38_20080"
     CDS             855..1466
                     /locus_tag="VLJ38_20080"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41894.1"
                     /translation="MSAGTLEPTPFAATGVDARPADGSDIDRIYAEHARYVWRCLRAL
                     GVRDAALDDAVHDVFLVVQQKLAQFDGQAAVTTWLYAIALRIARRARATARKDAWRFA
                     TVDGDDTLPEPVAAHAVSTDHPERALERGERLSLARRALERLDDDKREAFVLSQVEQR
                     SAPEIVAITGLPLNTVYSRVRAAKAAFQAEVARLELIQRGTSQ"
     gene            1463..2296
                     /locus_tag="VLJ38_20085"
     CDS             1463..2296
                     /locus_tag="VLJ38_20085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41895.1"
                     /translation="MNGDSELDPFTAALREDLPTAADEARLRVRLASAGLLAGTGLLT
                     PAGSAAATATATTGVFAKLVALPLAVKVGASLALAGVAVVPLVRFRSQAAPAPAEVSA
                     RAVASVTAPPARRTAEGARRVDVTDGAEARVPVPPGVAAASSVSAEAVASGEPASSAK
                     PEHGPVPGTAVGAGEMRASSRGGREVAMARNVGSGAPAATSSLPAVAAFPEPPSASED
                     EGTLRAETAVMEHALAALKRGDFGTARRELALHAAQFPNGHLAPERDRALARIREKTT
                     P"
BASE COUNT          307 a          828 c          888 g          355 t
ORIGIN      
        1 tgagctcgaa cggctcgcgg gcgcggacgc gagccgcgcg aggccgtcgc tcgtgcgcat
       61 cgagcacgat gctggttcgg gcacgtatcg gctgacgctc gaggtcgcgg gccagcaccg
      121 tgagctaacg cacacggatt gtcgcgtgct cttgcgcagc gccgccgtga tctcggccgc
      181 gtcggtgaag gtcgacgcgc cgccacccgt ggtcgcaccg gtcgcgtctt cgccgccgca
      241 agccatgtcc tcgagcccca gcgtgactcg tcaagacgcg ccgcccgtca ctgagccaca
      301 cgcccgctcg agcgaaccca ctcggcgtct ccacggccac gtcgccgtcg gcggcggcat
      361 cgccgtcggc gtggtcccgg ctgcgacgcc cgccgccgag gttcgcggag gcatctcccg
      421 cggggcttgg ggcgcgacgc tcgccgggcg ctactttgcg ccccagtcgg ccacggtcga
      481 gggccgcgtc gccgacattc gcgggtacgg cttgcgcgcc gcgggcgtcc tcgcgcccac
      541 cacctggctc tcggtctcgc tcgggctcga catagagctg ctcgtcgggc gtggccgcga
      601 cggcgtcgcg gtacccgcca cggattcggc ctggacgctg gcaccctcgg cggagctcgc
      661 cgcaataccc atccagaatg agcacttggc gctcgagctc gcggtgctcg gccgcgtggc
      721 gctcgtgcgc cccgtcttcg aggtgggcgg tttcggagcg ctctatcgag tgccaagctt
      781 ggggatggct gcgctggcgc gcggcgtttg gcgttttcgg tgacggatcg gacgccttgc
      841 gaggatgaac caccatgtcc gctgggacgc tcgagccgac gccgtttgcc gcgaccggcg
      901 ttgacgcgcg accggccgac ggttcggaca tcgatcgcat ctacgcggag cacgctcgtt
      961 acgtgtggcg ttgcctgcgg gcgctcggcg ttcgtgatgc cgcgctcgac gacgccgtgc
     1021 acgacgtgtt cctcgtcgtg cagcagaagc tcgcgcagtt cgacggccaa gctgcggtca
     1081 cgacctggct ctacgcgatc gcgctccgta tcgcgcgccg cgcccgcgcg accgcgcgca
     1141 aagacgcttg gcggttcgcg accgtcgacg gcgacgacac actgccggag cccgtcgccg
     1201 cgcacgccgt gagcaccgat catcccgagc gggccctcga gcgcggcgag cgtctctcgc
     1261 tggcgcggcg cgcactcgaa cggctggacg acgacaagcg cgaagcgttc gtgctctcac
     1321 aagtcgagca gcgctccgcg ccggagatcg tcgccatcac ggggcttccg ctcaacaccg
     1381 tctactcgcg cgtgcgcgcg gcgaaggccg catttcaagc ggaagtggcg cggctcgagc
     1441 tcatccagcg aggaacatcc caatgaacgg cgacagcgag ctcgaccctt ttacggcagc
     1501 gttgcgcgag gatctgccga ctgcagctga cgaggcacgg cttcgcgttc gcctcgcgtc
     1561 ggctgggctg ctcgcgggta cgggcctgct gacgccggcg ggcagcgccg cggcgacggc
     1621 taccgcgacg acgggcgtgt tcgcgaagct cgtggccttg ccgctggccg tcaaggtggg
     1681 agcgtcgctt gcgctcgctg gtgttgcggt cgtgccgctc gtgcgttttc gctcgcaggc
     1741 ggcgcctgcg ccggcggagg tctcggcgcg tgcggtcgcg agcgtcacgg cgccgccggc
     1801 gcggcggacg gcggaaggcg ctcggcgcgt ggacgtgacg gacggtgcgg aagcgcgcgt
     1861 gccggtgccg cccggcgtgg cagccgcgag ttcggtctcg gccgaggcgg tggcgtcggg
     1921 cgaacctgca tcttcggcga agccggagca cgggccagtg ccggggaccg ccgtcggcgc
     1981 aggggagatg cgagcgtcga gccgcggtgg gcgtgaagtc gcgatggcgc gcaacgtcgg
     2041 gagcggggcg ccggcggcca cgtcgagcct gcccgccgtg gccgcttttc ccgaaccgcc
     2101 ctcggcgagc gaagacgagg gcacgttgcg cgcggagacc gcggtgatgg agcacgcgct
     2161 cgccgcgcta aagcggggtg atttcggcac ggcacggcgc gagctcgcgc tgcacgccgc
     2221 gcaatttccg aatgggcact tggcgcccga gcgcgaccgc gcgctcgcgc gaattaggga
     2281 gaagacgaca ccatgaaaac gaacatctcg aaggtttgga cgggtcgcta cgcgctgctg
     2341 gcgctcgtgg cgtgggcgcc gctggggctc ggggcgaa
//
LOCUS       DATIML010001166         2759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2842880, whole genome shotgun sequence.
ACCESSION   DATIML010001166 DATIML010000000
VERSION     DATIML010001166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2759
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2842880"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..1490)
                     /locus_tag="VLJ38_20090"
     CDS             complement(165..1490)
                     /locus_tag="VLJ38_20090"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: protein motif:HMM:NF009789.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009015 - N-succinylarginine dihydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006525 - arginine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HSU41896.1"
                     /translation="MPARELNFDGLVGPTHHYAGLSAGNLASARHAGNVSNPRAAALQ
                     GLAKMRFVAELGVGQAVLPPQPRPDVALLRRLGFEGTDAVVLADARRAAPELLSAASS
                     ASAMWTANAATVAPSSDTLDERVHLVPANLVTMLHRSIEAPYTTRLLSRLFADARYFH
                     VHEPLPASEWTADEGAANHTRLATELGAVHLFGWGRSRSAKRRPTVHPARQTREASEA
                     VARLLHLPLLHTILWQQAPAGIDGGAFHSDVLCVGKDGFFMLHERAFLDHEALVAELR
                     LRLGGELDIALASEQELPLSEAVATYPFNSELVTLPSGGMAIIAPSEAEQSHAARRFL
                     ERLVVEPSPVTALHFVDVNDSMHNGGGPACLRLRVRLEPREVTALAGRVVFDSALHDE
                     LAACVRRRYRDRVTLDDLPDPEFVDECRTALDEITTILGLGSVYDFQLA"
     gene            1683..2081
                     /gene="rpsL"
                     /locus_tag="VLJ38_20095"
     CDS             1683..2081
                     /gene="rpsL"
                     /locus_tag="VLJ38_20095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006863839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HSU41897.1"
                     /translation="MPTIQQLIRIGREAITTRTASPALRECPQKRGVCLRVYTVTPKK
                     PNSALRKVCRVRLTNSMEVITYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHVVRGTL
                     DASGAIGPSSTNKANRNRSRSKYGVKRPKQ"
     gene            2097..2567
                     /gene="rpsG"
                     /locus_tag="VLJ38_20100"
     CDS             2097..2567
                     /gene="rpsG"
                     /locus_tag="VLJ38_20100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HSU41898.1"
                     /translation="MPRRRDVPKRKIIPDPKYKDKLVAKFTNCLMLGGKKSVAEGILY
                     GAFDVIQSRHKEDPLEVFRKALDNIKPKLEVKSRRVGGATYQVPVEVRPERRVALAMR
                     WLVSYSRGRGEKTMRERLAAELVDASQLRGNAVKKKDDTHKMAEANKAFAHYRW"
BASE COUNT          489 a          919 c          916 g          435 t
ORIGIN      
        1 ggttccgcta caacatcgtg tggctcgcct ggctgactgc actcggcgga tacctggcct
       61 gcgcgcggct gctcggagcc gtggcgcggc actggcgcgc gcgcttggtg ggcgacgtgg
      121 ctcgttagcg tatcgagcgg catcacccac ggcttcgagc gcaactaggc gagctgaaag
      181 tcgtacacgc tgccgagccc taaaatggtg gtgatctcgt cgagggccgt ccggcattcg
      241 tcgacgaatt cggggtcggg taggtcgtcg agcgtcacgc ggtcgcggta gcggcgacgc
      301 acgcaggccg cgagttcgtc gtggagcgcg gagtcgaaga cgacgcgccc ggcgagcgcg
      361 gtcacttcgc gcggctcgag cctgacgcgc aagcgtagac acgccgggcc tccgccgttg
      421 tgcatcgagt cgtttacgtc gacgaagtgg agcgccgtga cggggctcgg ttccaccacg
      481 agccgctcga ggaagcggcg cgcagcgtgc gactgctcgg cctcgctcgg cgcgatgatc
      541 gccatgccgc ccgacggcag cgtgacgagc tccgagttga aaggataagt cgcgaccgct
      601 tccgaaagtg gcagctcttg ctcgctcgcc aaggcgatgt cgagctcgcc tccgaggcgt
      661 agcctgagct cggccacgag cgcttcgtga tcgagaaacg ctcgctcgtg gagcatgaag
      721 aagccgtcct tgccgacgca aaggacgtcc gagtgaaacg cgccgccgtc gatgccggcc
      781 ggcgcttgtt gccagaggat cgtgtgcagc aacggcaggt gtaggagccg cgcgacggct
      841 tcactcgctt cgcgcgtctg tcgcgccggg tgcacggtcg ggcgccgctt ggcgctgcgc
      901 gagcggcccc agccgaacag gtgcacggcg ccgagctcgg tcgcgagccg cgtgtgattg
      961 gcggcgcctt cgtccgcggt ccattcgctc gcgggcaacg gctcgtgaac gtgaaagtag
     1021 cgcgcgtccg cgaacaggcg cgagagtagg cgcgtcgtgt acggcgcttc gatgcttcga
     1081 tgcagcatcg tgacgagatt ggccggcacc aagtgcacgc gttcgtcgag cgtgtcgctc
     1141 gacggcgcga ccgtagccgc gttcgccgtc cacatcgcgc tcgcactcga cgcggcggag
     1201 agcagctccg gcgccgcgcg ccgcgcgtcc gcgagcacga cggcgtcggt gccttcgaaa
     1261 cctagccgtc gcaagagcgc cacgtcgggt cgcggttgcg gcggcaggac cgcttggcct
     1321 acgccgagct cggcgacgaa gcgcatcttc gcgagaccct gcagtgccgc cgcgcgcgga
     1381 ttcgagacgt tgcccgcatg tcgcgcgctc gcgaggttgc cggcggacag tcccgcgtaa
     1441 tgatgggtgg gccccaccag cccgtcgaag ttgagctcgc gtgcgggcat cgtggtattt
     1501 taggtctgcc cgccagccgg aggacatttc acgtgacggg cctcgcgcct cccggtgtgg
     1561 cgtagcaaaa aatcgaacga gttcaggtac ttggggaata ggactgagag ccctctcgcg
     1621 aggcttgaca cccgacccgc cacggctacc ttcccggtcc cctaaatccg gcctacccgt
     1681 agatgcctac aattcagcag ctcatccgca tcggtcgcga agccatcacg acgcgcaccg
     1741 cttcgcccgc ccttcgtgaa tgtcctcaaa aacgcggcgt gtgcttgcgc gtctacacgg
     1801 tgactccgaa gaagccgaac tcggcgcttc gcaaggtgtg ccgcgtgcgc ctcaccaaca
     1861 gcatggaagt catcacctac attccgggtg aaggtcacaa cctgcaagag cacagcgtcg
     1921 tcttgatccg cggcggccgc gtcaaggatc tgccgggcgt gcgttaccac gtcgtgcgcg
     1981 gcaccctcga cgcctccggc gccatcggtc cgagcagcac caacaaagcc aaccgcaatc
     2041 gcagccggtc caagtacggc gtcaagcggc ccaagcagta agaggaacac aaagccatgc
     2101 cccgccgcag agacgttccc aagcgcaaga tcatcccgga cccgaagtac aaggacaagc
     2161 tcgtcgccaa gttcaccaac tgcttgatgc tcggcggcaa gaagtccgtc gccgaaggca
     2221 tcctgtacgg tgcgttcgac gtgattcagt cccgccataa ggaagacccg ctcgaggtgt
     2281 tccgcaaggc gctcgacaac atcaagccga agctcgaagt gaagagccgc cgcgtcggtg
     2341 gcgcgaccta ccaggtgccc gtcgaagtgc ggcccgagcg ccgcgtcgcg ctcgcgatgc
     2401 gctggctcgt ttcgtactcg cgcggccgcg gtgagaagac catgcgcgag cgcctcgccg
     2461 ccgagctcgt cgacgcgtcc cagctccgcg gcaacgccgt gaagaagaag gacgacacgc
     2521 acaagatggc cgaggccaac aaggccttcg ctcactatcg ctggtgagcg ccgtccgcag
     2581 cgtaactctc gtttaggaga atcgccccga gcatgactca gacgacataa gacgggttgc
     2641 ggctaggcgc ctcgcacggc gccccgctcc aaagagcggc agcgcgcacc ccgatccctt
     2701 ccgacaaaga aactccccga tggtgggagc gctgggtcgg aagggatttc gtctgtcta
//
LOCUS       DATIML010001167         3046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5158944, whole genome shotgun sequence.
ACCESSION   DATIML010001167 DATIML010000000
VERSION     DATIML010001167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5158944"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VLJ38_20105"
     CDS             <1..427
                     /locus_tag="VLJ38_20105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41899.1"
                     /translation="KTGWRWSANGNTGPYNAAYDIWLGTDTGFGMYLMVWLRDPPGQQ
                     PAGAPNAANQGVTVANVPGVWDIWNGTVNNRPIINWVRHEGSDSSEIEFDVMDFIRDA
                     QTRGLTITGTQVNAVAVGFEIWQGPITNLETKDFYVDVK"
     gene            506..1993
                     /locus_tag="VLJ38_20110"
     CDS             506..1993
                     /locus_tag="VLJ38_20110"
                     /inference="COORDINATES: protein motif:HMM:NF014335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HSU41900.1"
                     /translation="MSRALGALCAVWCVHRVIFVASVCSAAPAAAAPTDEAEKHAVSE
                     AVDQAFRENTETRDQPSESRALAERAEHVLNDFIDIGGYVRSGYGRSGAGGPMVPFQA
                     PGAVTKYRLGNEAETYGELILGKNFYLPGIFNLDGAAPSEGRLKGPIARVQLRVSFFN
                     KYTAFGSANDTAVGLPEAWASVGNVLSFAPSTKFWAGNRFYRRHDIHVLDFFYWNTSG
                     GGGGIEDVPLGPGHLAFAWIGWGSTSGLSYVPQPDPQNRAGFSKSVYDLRAYDLPLLF
                     GQVELGLAYSNAVSGVDELGRKGPRSHGVAGALVHTVSHFISDDGVQKLSIQYGTGPA
                     RTFTTGFETVSLPQGTFIRPDANGETRLRVTESFSANIGEYFSLGPVVVFQLSRQGEP
                     RKDQVWVSAGARPIFHFTKLVSLALEGGVDWVKDDAAGTSGTLTKITACPQVSIGNRW
                     NSRPVIRAFVTGAFWSHDFVGRVGGPDYATSHEGLNAGMQMEAWW"
     gene            complement(2042..2749)
                     /locus_tag="VLJ38_20115"
     CDS             complement(2042..2749)
                     /locus_tag="VLJ38_20115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41901.1"
                     /translation="MSNLGPEARGLVEAGRAALAPTDADRARNLAALGARLPPGALDH
                     PEPAATPTAASGGLGWPAVSAIVAGLVASAGIAFFALRAPTKPLPVVAPAPQLTAEAP
                     SAFAPPAVSTASPATPSSDAALLAPNANAPATPAPPAPRGTSRRSSDRLAEEVAILSQ
                     AETELHAGHYAGALGLLAQHARSFPRGTLAQERIGAQVQALCGLGRRTEADLTLRRLA
                     PGSLQETRARAACGLKD"
     gene            complement(2752..>3046)
                     /locus_tag="VLJ38_20120"
     CDS             complement(2752..>3046)
                     /locus_tag="VLJ38_20120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HSU41902.1"
                     /translation="SGPVLAVQHELEHPVPPTPLDVTQQNDQVKLLFSLLEGLDPPKR
                     EVFMLAELEEMTAPEIAAILEIPLNTAYSRLRAARQAFEQALARHAARLRGGA"
BASE COUNT          496 a          988 c         1059 g          503 t
ORIGIN      
        1 caaaaccggc tggcgctggt cggcgaacgg caacacgggg ccttacaacg cggcgtatga
       61 catttggctc ggcacggaca ccggcttcgg catgtacctc atggtctggc tgcgtgaccc
      121 gccgggccag caacccgccg gcgcgccgaa tgcggcgaat cagggcgtta ctgtcgccaa
      181 cgtcccaggc gtctgggata tttggaatgg taccgtaaac aatcggccca tcatcaactg
      241 ggtccggcac gagggcagcg acagctcgga gatcgaattc gacgtgatgg acttcatccg
      301 tgacgcgcag acgaggggac ttaccatcac gggcacgcaa gtgaacgcag tcgccgtcgg
      361 gttcgagatc tggcagggcc cgatcacgaa cctcgaaacc aaggactttt acgtcgacgt
      421 gaaatgagtc cgcggctccg gccggcgggc ggagcacgcg aactggcttg tggtgggtgg
      481 ctgagatcgc gcaccatgac gcgccatgag ccgagccttg ggggcgcttt gcgccgtttg
      541 gtgcgtgcat cgtgtcattt tcgtcgcgag cgtgtgttca gcggcgccgg ccgccgctgc
      601 tccgacggac gaagctgaaa agcacgccgt ctccgaagca gtggatcagg cgttccgcga
      661 gaacacggag acgcgtgacc agccgtcgga gagtcgagcg ctcgccgagc gcgccgaaca
      721 cgtgttgaac gacttcatcg atatcggcgg ctacgtgcgt tccggttacg ggcgctcggg
      781 tgcgggcggt ccgatggtgc ccttccaagc gcccggggcc gtcaccaaat atcgtctcgg
      841 caacgaggcg gagacttacg gcgagctaat cctcggcaag aacttctatt tgccgggcat
      901 cttcaacctc gacggggccg cgccgtccga gggtcgcctg aaggggccca tcgcacgtgt
      961 tcaactgcgc gtgagctttt tcaacaagta cacggcattc ggctccgcca acgatacggc
     1021 ggtcggcttg cccgaagcgt gggcgtcggt cggcaacgtg ctctcgttcg cgccgagcac
     1081 gaaattctgg gccggcaatc gcttctatcg ccgccacgac attcacgtcc tcgatttctt
     1141 ttactggaac acgagcggcg gcggcggcgg catcgaagac gtgccgctcg gtcccggtca
     1201 cctcgcgttc gcgtggatcg gctggggcag cacgagcggc ctcagctacg tgccgcagcc
     1261 cgacccgcaa aatcgagccg gcttctccaa gtccgtctac gatttgcgcg cctacgatct
     1321 cccgcttctg ttcggtcagg tcgagctcgg cctcgcgtac tcgaacgccg tgagcggcgt
     1381 cgacgagctc ggccgcaaag gtccgcgcag ccacggcgtc gccggcgcgc tcgttcatac
     1441 cgtctctcat ttcatcagcg acgacggtgt tcaaaaactc agtatccaat acggcacggg
     1501 gccggcgcgc accttcacga ccggtttcga aaccgtcagt ttgccgcagg gcaccttcat
     1561 tcgccccgac gcgaacggcg agacccgcct gcgcgtcacg gaaagcttca gcgccaacat
     1621 cggcgagtat ttctcgctcg gccccgtcgt cgtcttccaa ctcagccgcc agggcgagcc
     1681 gcgcaaggac caggtgtggg tctccgccgg cgcgcgaccc atcttccatt tcacgaagct
     1741 cgtgagcctc gcgctcgagg gcggcgtcga ttgggtgaaa gacgatgccg cgggcacctc
     1801 gggcaccctc acgaaaatca ccgcgtgtcc gcaggtctcg atcggcaacc gctggaacag
     1861 ccgccccgtg atccgcgcgt tcgtcacggg ggcgttttgg agccacgact tcgtcggtcg
     1921 cgtgggcggt cccgattacg cgacgagcca cgaggggctc aacgccggga tgcagatgga
     1981 ggcatggtgg tgagctcgct ccacggagcg agcggccact cgcgtgcctc agtgtcgtgc
     2041 gctaatcttt gagtccgcag gccgcgcgag ctcgcgtttc ctgcagcgac ccgggcgcga
     2101 ggcgacgcag ggttaggtcg gcctccgtgc ggcgaccgag gccgcacagc gcttggacct
     2161 gcgccccgat gcgttcctgc gcgagcgtgc cgcgagggaa cgagcgggcg tgttgggcga
     2221 gcagaccgag cgcgccagcg tagtggccag cgtgcagctc cgtctcggcc tgcgacagaa
     2281 tggcgacttc ttcggcgagg cggtccgaac tgcggcgcga cgtgccgcgc ggcgcgggcg
     2341 gcgcgggcgt tgcgggtgca ttcgcgttcg gggcgaggag tgcagcgtcg ctgctcggcg
     2401 tggcaggcga cgcggtggac accgcgggcg gcgcgaacgc actgggcgct tccgccgtaa
     2461 gctggggcgc cggcgcaacg acgggcagcg gcttggtcgg cgcacgtagc gcgaagaagg
     2521 cgatgccggc gctcgcgacg aggcccgcga cgattgcgga gacggcgggc cagccgagtc
     2581 cgccgctcgc cgctgtaggc gtcgccgcgg gctccggatg atcgagcgca cccgggggca
     2641 ggcgcgcgcc gagggccgcg agattgcgcg cgcgatcggc gtccgtcggc gcgagcgcgg
     2701 cacgccctgc ttcgaccaat cctcgcgctt cgggtccgag gttcgacaag actaagctcc
     2761 tccccgcagg cgcgcagcat gtcgagccaa cgcttgctcg aatgcctggc gcgcggcgcg
     2821 gagccgcgag tacgccgtgt tcagggggat ctccagaatg gcggcgatct cgggagccgt
     2881 catttcctcg agctcggcca gcatgaacac ttcgcgcttt ggcggatcga ggccctcgag
     2941 caaactgaag aggagcttga cctggtcatt ttgttgcgtg acgtcgaggg gcgtcggggg
     3001 cacgggatgt tcgagctcgt gctggacggc gagcacggga ccggac
//
LOCUS       DATIML010001168         8227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3420130, whole genome shotgun sequence.
ACCESSION   DATIML010001168 DATIML010000000
VERSION     DATIML010001168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8227
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3420130"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..825
                     /locus_tag="VLJ38_20125"
     CDS             <1..825
                     /locus_tag="VLJ38_20125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41903.1"
                     /translation="SPPDSDSSPGRTSPSSNGCDAQSVSFDEIRAGAVRSDVEVRVDA
                     TATSQKFLLSHAHSGSCLFGAFVGVDPDADGPHGVLVVSYGDDAADADACPLGTDAIP
                     DDLAPGDVVRTVGYLGSYAPSGCTVTPSPQLMVDRACPVARSGRRSVPEPFVLPLDDA
                     DALAQGTDSARVRRFAGGLVRLEHVSAHRADDGTGSVGPYGVIALNETALELHNDLEY
                     GDLSLGGPGDAQKSLVFAYPTDFASVTGVVYLDYCTWSLAPRSRCSDLVPPSANCH"
     gene            943..1173
                     /locus_tag="VLJ38_20130"
     CDS             943..1173
                     /locus_tag="VLJ38_20130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41904.1"
                     /translation="MAKDSVEHLHAFLPPPPSTPDDGPSVLSVPPLDAPPRSLQVSRV
                     RVGRKWSFPLRTWAAFFALFAVGTFITVLLER"
     gene            1309..3534
                     /gene="priA"
                     /locus_tag="VLJ38_20135"
     CDS             1309..3534
                     /gene="priA"
                     /locus_tag="VLJ38_20135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HSU41905.1"
                     /translation="MLLARVALPVPLGQVFTYSVTAELAATVRRGARVLCELGKRRVL
                     GVVLEVNDREPEIPVEKLKPVRAVVDAEPVLPEELLGFLQEIARYYIAPVGEVMELAL
                     PAVERSAALAVEAPADTRAVGRLVQVAHAVAGVATPKLRGKAPLIFEHLVAAGPTPLT
                     ALEERWPSARNAVAKLVEAGAVTLEKREEAIDPFTVEVAADVPPALTPAQTHAVEAIT
                     ARLERAEKRAFLLEGVTASGKTEVYLRAAKRCLELGRGVIVLVPEIALTPQLVARFRA
                     RLGSRIAVLHSGLGEVERHAMWRSLRSGEVRIAVGARSALFAPVQALGLVCVDEEHDG
                     SFKQEEGVRYHARDMALLRAHRAEAVCVLGSATPSATSVELARSGRLELLELPARARA
                     ASTLPEVEVVDLRRTGPGPGGERLISVRMFRALEETLAARGQSILFLNRRGFAPSLVC
                     TACGKITECPNCAVALTLHRARGGQLICHYCDHHEALPEKCGQCGEQAFEEEGAGTER
                     IESVLGQILPGARIARLDRDVAAGKKSERVLDRMRSGDIDVLVGTQMVTKGHDLPNVT
                     LVGVLNADAALSLPDYRASERTFQLLVQVAGRAGRGETPGRVLIQTWQPEHPAVALAV
                     KHDVKGFTAQELEQRREVGYPPFARLALVRFEALDDDVARSQTERLATAARKWGAPDV
                     EVLGPTAAPLARLRGRYRHRFLLRAQDRARLRLVLLGIARAPIDRRVRMAIDVDPVSM
                     L"
     gene            3588..4094
                     /locus_tag="VLJ38_20140"
     CDS             3588..4094
                     /locus_tag="VLJ38_20140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41906.1"
                     /translation="MRRIPSLLAAAFAVTLSAANARAFEREWHLGGGLGGAAANGYPF
                     GPAVNLYGAYGLSDVFDLRLEFAASRHGTTPDPAVLYGAKLALAYKVDVIQWIPYLAV
                     SAGYLGVTERQAPFTLGQPTLGLLAGLDYALTRNFGLGIAGSYDYAFHPGAAYVNGFL
                     RAEYRFGF"
     gene            4105..5370
                     /locus_tag="VLJ38_20145"
     CDS             4105..5370
                     /locus_tag="VLJ38_20145"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter"
                     /protein_id="HSU41907.1"
                     /translation="MTIPSVNAAARAGAHGRIGAALRELVRTRELRILLLCNCVLGMA
                     QSFVTPFLSLFGTQEVKLSLGMFGVFMTANAVLNITLSTLLSHRSDTTYSRRSLLLVS
                     SFAGAVGYVGYAFVRDPRLLFVLGGAILGLASLAFSQLFACARELVERSELPKREVPL
                     YMNVFRMAFALAWTVGPAIAAFTLKALSFVGLFLGAASLYLTLFFLIVFFVHDDAPAA
                     RAPVAAARLRDVLARRDVLLWFLALTLMLGAHAMSITNMSLLVLRALGGSESQVGVIF
                     SLAPVFELPLMLYVGLLATRIRTERLIRASMLIAAVYFVGLSLVQTPAQIYPLQALSA
                     AVVSVTSGVAITFFQNKLPHQLGAATNLYANAARIGSTSSYLTFGFVASHFGHRGTAF
                     ACALLALAALTLTAFAAAYERADGAGGTL"
     gene            complement(6121..6723)
                     /locus_tag="VLJ38_20150"
     CDS             complement(6121..6723)
                     /locus_tag="VLJ38_20150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41908.1"
                     /translation="MTQHVPLHVTLRVVAGLPSLRKKQVFRVVREALGRPRAGDAGVV
                     HYSVQSNHLHLIVEAPNAGRLARGMQALAIRLAKRLNLLFGRRGRVFADRFHFRALKT
                     PLEVRRALAYVLNNYRRHADATGPRLPLSFRDPCSSAASFDGWDPEWIHAPPDPSALS
                     DPFAEIAMGVVAPRSFLLRRGWHRHGLLRPFDVSDERRRL"
     gene            complement(7723..8061)
                     /locus_tag="VLJ38_20155"
     CDS             complement(7723..8061)
                     /locus_tag="VLJ38_20155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41909.1"
                     /translation="MSRERERPPSRVTRLEAAVLLVACAVLVGIGLSFALAVAPRSDS
                     PSPTADDGPSDPAATYRAEQPVEAWHAGHWYPAHVHSAAAARYFITYDDFSISWHEWV
                     TARRLRPRPH"
BASE COUNT         1228 a         2729 c         2880 g         1390 t
ORIGIN      
        1 tcgccgccgg acagcgactc ctcgcccgga cgcacgtcgc catcgtcgaa cggctgcgac
       61 gcccaatctg tctcgttcga cgaaatccgc gctggcgccg tccgctccga cgtcgaggtg
      121 cgcgtcgacg ccacggcgac gagccagaag ttcctcttga gccacgctca ctcgggcagc
      181 tgccttttcg gggcgttcgt cggtgtggac cccgacgcgg acggcccgca cggcgtgctc
      241 gtcgtctcgt acggcgacga cgccgcggac gccgatgcgt gtccgctcgg caccgacgct
      301 attcccgacg atttagcgcc cggtgacgtc gtgcgcaccg tgggctacct cggcagctac
      361 gcgccgtccg gctgcacggt gacgccttcg ccgcagctca tggtcgaccg cgcctgtccg
      421 gtcgcgcgct ccggacgccg cagcgtgcca gaaccctttg tgctgccact cgacgatgcc
      481 gacgcgctgg cgcaggggac ggacagtgcg cgcgtgcgtc gcttcgcggg cgggctcgtg
      541 cggctcgaac acgtgagcgc ccaccgcgcg gatgacggca ctggaagcgt cggcccgtac
      601 ggcgtgatcg cgctgaacga aaccgcgctc gagctccaca acgacctcga gtacggcgat
      661 ctcagcctgg gcggccccgg cgacgctcag aagtcgctcg tgttcgctta ccccaccgat
      721 tttgcgagcg tgactggagt cgtctacctc gactactgca cgtggtcgct cgcgccgcgc
      781 agccgctgta gcgacctcgt gccgccaagc gccaactgcc attagcgaaa acacgacgcg
      841 ctgacgcgtt gagcgccccc gcgcgtacgt aacgcagcgc gtggggtaaa ttcctacggc
      901 gagctgccgt tttgctagac tgtgagcgca cgctccttgt cgatggccaa agattcggtc
      961 gagcacctgc acgcttttct gccaccgccg ccttccacgc cggatgacgg gccgagcgtg
     1021 ctgtcggtgc cgccgctcga cgcgccgcct cgctcgttgc aggtgtcgcg cgtgagggtc
     1081 ggccgtaagt ggtcgttccc gctgcgcacc tgggcggcgt tcttcgcgct cttcgccgtc
     1141 ggcacgttca tcaccgtcct gctcgaacgc tgagcgcccg cgccggttac gcctcgaacg
     1201 ctcagccgac acgccgtgcg tctcgaacgc agagccgaca tgccgtgcgt ctcgagcgcg
     1261 ccgtgcgttt ccgtacccag tgtgcgccga tgtactagtt tttgacgcgt gctgctcgcc
     1321 cgcgttgcgc tacccgtccc gctcgggcag gtgttcacct acagcgtgac tgcggagctc
     1381 gccgcgaccg tgcggcgcgg cgcgcgcgtg ttgtgcgagc tcggcaagcg gcgggtgctc
     1441 ggtgtcgtgc tcgaggtgaa cgatcgcgag cccgagatcc cggtcgagaa gctcaagccg
     1501 gtgcgcgccg tggtcgacgc cgagccggtg ctgcccgagg agttgctcgg gtttttacag
     1561 gagatcgcgc ggtactacat cgcgcccgtg ggcgaggtga tggagctcgc gctgcctgcc
     1621 gtcgaacgga gcgcggcgct cgccgtggag gcgccggccg acacgcgcgc cgtggggcgg
     1681 ctcgtgcagg tggcgcacgc ggtcgccggt gtggccacgc cgaagctccg cggcaaggcg
     1741 ccgctcatct tcgagcacct cgtggcagcg gggccgactc cactcacggc gctcgaagag
     1801 cgctggccga gcgctcgcaa cgccgtcgcg aagctggtcg aagcgggcgc cgtcacgctc
     1861 gagaagcgcg aggaagcgat cgatccgttc acggtcgagg tcgccgccga tgtgccgccc
     1921 gcgctcacgc cggcgcagac gcacgcggtg gaggcgatca cggcacgcct cgaacgcgct
     1981 gagaaacgag cgtttctctt ggagggtgtg acggcttcgg gcaagaccga ggtgtacctg
     2041 cgcgcggcga agcgctgcct cgagctcggg cgcggcgtca tcgtgctcgt gccggaaatc
     2101 gcgctcacgc cgcagctcgt cgcacgcttt cgtgcgcgcc tcgggagccg cattgcggtc
     2161 ttgcacagtg ggctcgggga agtcgagcgg cacgcgatgt ggcgttcgct gcgttcgggg
     2221 gaggtgcgca tcgccgtcgg cgcgcgctcg gccttgttcg cgcccgtgca agcgctcggt
     2281 ctcgtctgcg tcgacgaaga gcacgacggt tcgttcaagc aggaagaagg cgtgcgctat
     2341 cacgcgcgcg acatggcgct gctgcgcgcg caccgcgcgg aagccgtgtg cgtgctcggc
     2401 tcggcgacgc cttcggcgac gagcgtcgag ctcgcgcgca gcggccggct cgagctgctc
     2461 gaattgccgg cgcgggcgcg cgcggcgagc acgttgccgg aggtcgaagt cgtcgatttg
     2521 cggcgcacgg ggccggggcc gggcggcgag cgtctcatca gcgtgcgcat gttccgagcg
     2581 ctcgaggaga cgctcgcggc gcgcggtcag tcgattctct tcctgaatcg gcgcgggttc
     2641 gcgccgagcc tcgtgtgcac ggcgtgcggc aagatcacgg agtgccccaa ttgcgcggtc
     2701 gcgctcacgc tccatcgcgc gcgcggcggg cagctaatct gtcattactg cgatcaccac
     2761 gaggcgctgc cggaaaagtg cggccagtgc ggcgagcagg cgttcgagga agaaggcgcg
     2821 ggcaccgagc ggatcgaaag cgtgcttggc cagatcctgc cgggtgcgcg catcgcgcgg
     2881 ctcgatcgcg acgtagccgc ggggaaaaaa tccgagcggg tgctcgatcg catgcgctcg
     2941 ggtgacatcg acgtgctcgt cggcacgcag atggtcacca agggtcacga tctgccgaac
     3001 gtgacgctcg tgggcgtgct gaacgccgac gccgcgctct cgctgcccga ctaccgcgcg
     3061 tccgagcgca cgtttcagct cctcgtgcag gtggccggtc gcgccggccg cggcgaaacg
     3121 cccggtcgcg tcttgatcca aacctggcaa ccggagcatc ccgccgtcgc gctcgccgtg
     3181 aaacacgacg tgaaaggctt caccgcgcag gagctcgagc agcggcgtga ggtcggctat
     3241 ccaccgttcg cgcgcctggc gctcgtgcgc ttcgaagcgc tcgacgatga cgtcgctcgc
     3301 tcccaaaccg agcggctcgc gaccgcggcg cgcaagtggg gcgctcccga cgtcgaagtc
     3361 ttgggtccca cggcggctcc gctcgcgcgc ctgcgcggcc gttatcgtca ccgctttctc
     3421 ctgcgcgccc aggaccgcgc gcgtttgcgg ctcgtactgc tcggtatcgc tcgcgccccc
     3481 atcgaccggc gcgtgcgcat ggcgatcgac gtcgatccgg tcagtatgct ctaatcccac
     3541 gccttgacgg ccgaggttcg ctacggcccg acgctagctc ccgacccttg cgccgcatcc
     3601 cttcgctcct cgccgccgcg tttgccgtca cgctttcggc agcgaacgct cgtgcgttcg
     3661 agcgcgagtg gcacctcggt ggcggcctcg gcggggccgc ggcgaacggg tatccgttcg
     3721 gccctgccgt gaacctgtac ggcgcctacg gtctttcgga cgtgttcgat ttgcggctcg
     3781 agttcgcggc ttcgcgccac gggacgacgc cggatccagc cgtgctttat ggcgcaaagc
     3841 tcgcgctggc gtacaaagtc gacgtcattc aatggatccc ttacttggcc gtctcggccg
     3901 gctacctggg cgtgaccgag cgccaagcgc cgttcacgct gggccaaccg acgctcgggc
     3961 tgctcgcggg gctcgactac gcgctgacgc gcaatttcgg gctcggcatc gccgggagct
     4021 acgactacgc gttccacccg ggcgccgctt acgtgaacgg cttcttgcgc gccgagtatc
     4081 gcttcggttt ttgagcgcgc gacgatgacg atcccgtccg tcaacgcggc cgcgcgagcg
     4141 ggcgcgcatg gccgaatcgg cgccgcgctg cgcgagctcg tgcgcacgcg cgagctcagg
     4201 atcttgctgc tctgcaattg cgtgctcggc atggcgcagt cgttcgtgac gccgtttttg
     4261 agcttgttcg gcacgcagga ggtgaagctc agcctcggca tgttcggcgt gttcatgacg
     4321 gccaatgccg tgctgaacat cacgctcagc acgttgctgt cgcaccgctc ggacacgacg
     4381 tattcacgcc gttcgctgct gctggtcagc tcgttcgcgg gcgccgtcgg ctacgtgggc
     4441 tacgcgttcg tgcgcgaccc gcggctgctc ttcgtgctcg gcggcgcgat cctcggccta
     4501 gcttcgctcg cgttctcgca actgttcgcc tgcgcgcgcg agctcgtcga acgctccgag
     4561 ctgccgaagc gcgaggtgcc gctctacatg aacgtcttcc gcatggcgtt cgcgctcgcg
     4621 tggacggtgg gtccggctat cgccgccttc accctgaagg cgctctcgtt cgttgggctg
     4681 tttctcggcg ccgcgtcgct ctatttgacg ctatttttcc tgattgtctt cttcgtacac
     4741 gacgacgcgc ccgccgcgcg cgcaccagtt gcggcggcgc gtttgcgtga cgtgctcgcg
     4801 cgacgcgacg tactgctctg gtttctcgcg ctcacgctga tgctcggcgc gcacgccatg
     4861 tccatcacga acatgtcgct gctcgtcctg cgcgcgctcg gcggcagcga atcgcaagtg
     4921 ggcgtcatct tcagcctcgc gcccgtcttc gagctcccct tgatgctcta cgtcggcctc
     4981 ctcgcgacgc gcatccgcac cgaaagactc atccgcgcct ccatgctgat cgcggccgtc
     5041 tacttcgtcg gcctctcgct cgtgcagacc cccgcccaaa tctatccctt acaagccctc
     5101 agcgcggcgg tcgtctccgt cacgagcggc gtcgccatca ccttcttcca aaacaaactc
     5161 ccgcaccaac tcggcgcggc caccaacctg tacgcgaacg cagcccgcat cggctcgacg
     5221 tcgagctacc tgaccttcgg cttcgtcgcc tctcatttcg gccaccgcgg caccgcgttc
     5281 gcctgcgcgc tcctcgcgct cgcggcgctc acgctcacgg cttttgcggc ggcgtacgaa
     5341 cgcgcggacg gcgcgggggg gacgctgtga gaggcggcgg cgttcggacg cgtgcacgcg
     5401 tagcctccat cgctcgcgcg gtgacgcggg tgacgcggaa cgcgacgtgg agcctgcgtt
     5461 acgcgggcgg cgtcatggcg ctcctgcgcg atgctacaaa caccgaggtt tgcgtgggca
     5521 gccgcgtgtc acgctgacgg cgccgcacgc tgacggcgca caacgctgac ggcgcacaac
     5581 gctgacccgc accacactca cgggcggcgc ggggacggcg catcgctgtg gtgcgccact
     5641 ccgacgcgcc tcgaactgac ggagtcacgc ggacggacgc cgccactgag cgataccgag
     5701 caacggcgaa attgactgca tgcgcgcgcg ggcgctcagc aaaaatggcc gggcgagagc
     5761 gaattcgaaa ccttcgaagc accgtacgcc gcgcaagccg agctgatgcg ttctgagggt
     5821 tcgaatctcg aagtgaggca gagtacgcgc gagataggtc gttccgcgct gagcagcccc
     5881 gcaagcgtgg attgcgtcga cggtcgtctg cgggtgcccc agcggcggcg cgcaagccgt
     5941 tttttcacag cggagccggc cttgggcttc accgccgagg tcggtgacct ggcgacgagg
     6001 cgcgcgaatg cgtgcaagga gcagtacgct cctgacatgg aggaacgagg aggacggcaa
     6061 cgcgatgagc cgacaatcgc gaatcacgtt ggtatctccg atgtatctcc gagctgccgc
     6121 ttacaggcgt ctgcgctcgt ccgaaacgtc gaatgggcgg agcaagccat ggcgatgcca
     6181 tccgcgccgg agcaagaatg agcgcggggc tacgacgccc atcgcgatct cggcaaaggg
     6241 atcgctcaac gcgctcggat ccggtggagc atgaatccat tctggatccc agccgtcgaa
     6301 cgaggcggct gagctgcacg ggtcacgaaa cgacaatggc agacgcggtc ccgttgcgtc
     6361 cgcgtggcgc cgataattgt tgagcacgta agcgagcgcg cgtcgtacct cgagcggcgt
     6421 cttgagggct cggaagtgga aacgatcggc gaagacccgt ccgcgtcgcc caaacaagag
     6481 attgagccgc ttggccaggc ggatcgcgag cgcctgcatg cctcgtgcga ggcggcccgc
     6541 gttcggcgcc tcgacgatga gatgcagatg attggactga acggagtaat gaacgacacc
     6601 cgcgtcgccg gctcgcggcc gtcccaaggc ttcgcgcacc acgcgaaaaa cttgtttctt
     6661 gcgtagactc ggcaagccgg caacgacgcg cagcgtgacg tgcaacggga cgtgttgcgt
     6721 cacgcgtgga cgcgtggcgt gcgacacgcg cgtcgaggtt ttcggccgac cagctccgcg
     6781 acgtgcgccg ccccagctgc ggaaacggaa cgtctgttgt gcgacgctgc tgctctgggc
     6841 acgagcacgc ccacgccgag ctggcccagc atcagagcgt gaaggggtct tcggcatcga
     6901 cacttgaata tggcagatat tagccgggcg caccagtagc gtcagttgcg gggcgggggt
     6961 ccgggttaga gacatgggta acagatcggc ccgaagagat ccgtgagtag tgattttgtc
     7021 taaccgccag taccagcgta gttcttgcct ctcccgaaga tcctgagtgc ggcagaacgg
     7081 cgagcgccga gcggatcgcg cgagagagag caatttcgca ggggacgagg acagtcctga
     7141 gagtcggttc acgcaaatcc gaggacattc ctgacactgg cgcgcatggc tgaagaagca
     7201 ttcgacgcgg gcgagggcgc gatgccgccg ccgagcgcct cggcgtcagc ggagagttat
     7261 ccgcaaggcg aaagcagctg gaccgagggc gacgggaatg ccgcgggcgc tagcgcacgc
     7321 ggcgcctgtg atgagcaaag cgtcgcgacg tgcgatgttc ggcgaacagg ctcgcgacgc
     7381 gcggcgaact tgagacgcac ggcgaacttg agacgcgcgg cgaacaggct cgcgacgcgc
     7441 ggcgtgcgtg gcgagagaag cggggagttg gggcggccag cgacgagttg ggagtcgtct
     7501 agaggcgcga cggagccgag cgtcggctgc tgctgtagct caggcgtcag ccggacttcg
     7561 accttgattg acggtggaac ggggcgccgc gcggccgtcg acgccgaggc acctcgggtc
     7621 gccgctaaat actcccctcc gctcgtgagc tgacgactct ggctgttctt cgctcgtgag
     7681 gtgaggcgct gggggttgtc gcgaggtgcg aggtgggttg cctcagtgcg ggcgcgggcg
     7741 gaggcggcgg gcggtgaccc attcgtgcca gctgatggag aagtcgtcgt aggtgatgaa
     7801 gtagcgggcg gcggcggcgg aatggacgtg ggcggggtac cagtggccgg cgtgccaagc
     7861 ctcgacgggc tgttcggcgc ggtaggtggc ggccgggtcg ctcgggccgt cgtcggcggt
     7921 cggtgagggg gaatcgcttc gaggggcgac ggcgagggcg aatgacaatc cgatgccgac
     7981 gaggacggcg cacgcaacca ggagcaccgc cgcttcgagg cgggtgacgc gggatggggg
     8041 gcgctcgcgc tcgcgggaca tttcggtggc gcgtcctgct cggtcgcgtc ctgctctttc
     8101 gcgtagtggt agctcggctt gacaagcgcg tcgcgtgccc tgaggctttt gggcctgagg
     8161 cgacggggtc gccaaaggag agcgcgatga gagtagggat tttcggcacg ggggacgtgg
     8221 gtcgcac
//
LOCUS       DATIML010001169         1562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1403261, whole genome shotgun sequence.
ACCESSION   DATIML010001169 DATIML010000000
VERSION     DATIML010001169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403261"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..442
                     /locus_tag="VLJ38_20160"
     CDS             122..442
                     /locus_tag="VLJ38_20160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41910.1"
                     /translation="MRTAVVESVCECQARLGAEIDEQRRVVRGWGRKKLRSAQAPAIA
                     TGLSLQSFNVGWACPFCGRNTLRPFDTNALVFQEKPAPQEKPSASLPPGSRPAPRSLT
                     PTSG"
     gene            complement(449..>1562)
                     /locus_tag="VLJ38_20165"
     CDS             complement(449..>1562)
                     /locus_tag="VLJ38_20165"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41911.1"
                     /translation="GPAGPESIAHCDLKPENVFIANVGGERVAKILDFGVAEVRGAAR
                     RAARGADEVALFTPAYGAPEQWNPKEFGETGPWTDVWGLALTLVEALVGEPVIAGGHA
                     TVRAQILERKRRPTPRTHGAIVSDSVEAVFARALAVDPRDRYHDAGAFWRTLVVATDD
                     RAALPGSSGPEIPDLIPLARNPSHPELVAAPGAMNFDFDDLGNPGASLDLDLPADEPR
                     AKRSLAPSASADALGLDIAAPPAAPQVPPVLAEPSQHMPRVTRSSLPTPSLAPVTPRS
                     RAQPEAALRAPHAAASSAPPVAHPSSPVERSLVRRLLPGSALAASSVLLTVLDRVYAS
                     AAGEVFTLGPVRTSWVAAALLLGGLILCARELASRG"
BASE COUNT          246 a          531 c          562 g          223 t
ORIGIN      
        1 tcgtgctcta ccaactgagc tagtcccgct tgatggtccc gggagcttac tcctccgcga
       61 gcttcccgcc aaggcttgac ctgaggcccg cgcttccgct acgaagcctg gtcgaagctc
      121 catgcgaacg gccgtcgtcg agtccgtgtg cgaatgccaa gcccgtctcg gtgccgagat
      181 cgatgagcag cgccgcgtcg tccgcggttg ggggcggaag aagctgcgct ccgctcaagc
      241 gccggcgatc gcgaccgggc tctcccttca gagtttcaac gtcggctggg cttgtccttt
      301 ctgcggacgc aacaccttgc gcccgttcga tacgaacgcg ctcgtgttcc aggaaaagcc
      361 ggccccgcaa gaaaagccga gtgcaagcct accgccgggt tcgcggcctg caccgcgctc
      421 actcacgccg acgagcggtt gattccggtc agccgcgcga cgcgagctcg cgcgcacaca
      481 ggatgaggcc gccgaggagc agcgcggcag cgacccagct cgtgcggacg ggaccgagcg
      541 tgaagacctc ccccgctgcc gaggcataaa cgcggtcgag cacggtcagg aggacactgg
      601 aggcggcgag cgcgctgccc ggcagaaggc gccggacgag tgaacgttcg acggggctgg
      661 aagggtgcgc gaccggcggc gcagagctcg cggcggcgtg cggcgcgcga agagcggctt
      721 ccggttgcgc gcgcgaccgc ggtgtcaccg gcgcaaggga cggcgtgggt aaggacgacc
      781 gcgtcacgcg tggcatgtgc tgcgaaggtt cggcgaggac gggcgggacc tggggagccg
      841 cgggcggcgc agcgatgtcc aggccaagcg catcagcgct cgcgctcggt gcgagcgagc
      901 gcttcgcgcg cggctcgtcg gcgggtaagt cgagatcgag cgacgctccg gggttcccta
      961 ggtcgtcgaa gtcgaagttc atggcccccg gagcagccac gagctctgga tggctcgggt
     1021 tgcgcgcgag cgggatcaga tcgggaattt cgggcccaga gctaccgggt aacgccgcgc
     1081 gatcatccgt cgccacgacg agcgtgcgcc aaaaggcgcc agcgtcatgg tagcggtcgc
     1141 gaggatcgac ggcgagcgcg cgcgcgaaca ccgcttcgac gctgtcgctc acgatcgcgc
     1201 cgtgcgtgcg cggcgtcgga cggcgcttgc gctcgaggat ttgcgcgcgg acggtggcgt
     1261 gcccacccgc gatgaccggc tcgcccacga gcgcctcgac cagcgtgagc gcgaggcccc
     1321 acacgtccgt ccagggcccg gtttcgccga actctttcgg attccactgc tcgggagccc
     1381 cgtaggccgg cgtaaagagc gccacttcat ccgcgccgcg tgccgcccgg cgtgcggcgc
     1441 cacgcacctc cgcgacgccg aaatccaaaa tcttcgcgac gcgctcgccg cccacgttgg
     1501 cgatgaacac gttctccggc ttgaggtcac agtgcgcgat gctctcggga ccggcggggc
     1561 cg
//
LOCUS       DATIML010001170         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5159362, whole genome shotgun sequence.
ACCESSION   DATIML010001170 DATIML010000000
VERSION     DATIML010001170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5159362"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VLJ38_20170"
     CDS             complement(<1..248)
                     /locus_tag="VLJ38_20170"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU41912.1"
                     /translation="MIIIPVSDVERAKRFYLALGWRLDADFANDKGWHVVQLTPPGSP
                     CSIFLGQGITKAAPGSVRGTFLVVDDIQAAHAALSAAGV"
     gene            complement(367..>1680)
                     /locus_tag="VLJ38_20175"
     CDS             complement(367..>1680)
                     /locus_tag="VLJ38_20175"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU41913.1"
                     /translation="LTLAVVERELVGGECPYWGCVPSKTLLRSGESLSEAARARVLAA
                     SRVEWTVDFPKVMQRVRWMVRELDDTRPALALQTTGARLFRGAGRLVDVRTVAIGGER
                     LVARRAVVIANGGTAVIPELPGLDTVEFWTNRQATIPAELPGALAILGGGAVGLELAQ
                     AFARLGSQVTVIDAAATFLAHEEPEAGAALRRHLEADGITLHTGDPCVLVERRDAESR
                     AGVVLRLRSGSTVSADRVLVATGRRPNCEAWRDAGLSRTERGWLKVDPATLEARPGVF
                     GAGDVTGLGGFTHLAYYHGQIVARRLRGLDARADHRTIPRVTFTDPELASVGLSEAAA
                     RARGIDVVVASADPGEAARGYIHGFSGGALKLVADRGQGVLVGATLVTPRAGEILGEL
                     VLAIKLGVPLGVLADVMHPFPAFSRVLGASLQELAAQVKDPAARA"
BASE COUNT          266 a          600 c          569 g          245 t
ORIGIN      
        1 acgccggcag cgcttaaggc cgcgtgcgcc gcttggatgt catcgacgac gagaaacgtc
       61 ccccgcaccg agcccggtgc agccttcgtg atgccctgcc cgaggaagat cgagcacggc
      121 gagccgggag gcgtgagctg caccacgtgc cagcccttgt cgttggcgaa gtcagcgtcc
      181 agtcgccagc cgagcgcgag gtaaaagcgt ttcgcgcgct cgacgtcgga gaccggaatg
      241 atgatcactt ccagccgcgt ttctagcgtt tttgggcttg gaaccgaggg tacgtggcgg
      301 tcgatggtcg ctgcctgagt catggggttc tccagagggg tgggcggttg ctgctgatcg
      361 tcgtcgtcac gctcgtgccg cggggtcttt cacttgggcg gcgagctcct gcaggctcgc
      421 accgagcacg cggctaaaag ccgggaacgg gtgcatcacg tcggcgagca cgccgagtgg
      481 aacaccgagc ttgatggcga gcacgagctc gccgaggatc tccccggcac gcggcgtcac
      541 cagggtcgct ccgaccagta cgccttgccc gcggtccgcg acgagcttca gggcgccgcc
      601 gctgaagccg tgaatgtagc cgcgcgcggc ttcgcccgga tcggcgctcg ccacgactac
      661 gtcgatgccg cgagcgcgcg cggccgcttc cgaaagcccg accgaggcga gctctggatc
      721 ggtgaaggtg acgcgtggaa tcgtccggtg atcggcgcgc gcgtcgagcc cacgcaggcg
      781 gcgcgccacg atttgcccat ggtagtacgc aaggtgcgtg aagccaccga gccccgtgac
      841 gtcgccagcg ccgaagacac ccgggcgggc ttcgagcgtc gctgggtcga ctttcaacca
      901 cccgcgctcc gtgcgcgaga gtccggcgtc acgccaagct tcgcagttcg gacggcgccc
      961 cgtcgcgacg agcacgcgat ccgccgacac tgtgctgccg gagcgcaggc ggagcaccac
     1021 gccggcgcgc gactctgcgt ctcgtcgctc cacgagcacg cacggatcgc ccgtgtgtag
     1081 cgtgatgccg tcggcttcga ggtgacgccg cagcgccgcg ccggcttccg gctcctcgtg
     1141 cgcgaggaac gtcgccgcag catcgatcac cgtcacttgc gagccgagcc gcgcgaaagc
     1201 ctgcgcgagc tcgaggccga ccgctccgcc acccaggatc gcgagtgctc cgggcagctc
     1261 ggccggaatc gtggcctgac gattcgtcca aaattccacc gtgtcgagcc cgggtagctc
     1321 ggggatcacg gccgtgccgc cgttcgcaat cacgaccgcg cgccgcgcga cgagccgttc
     1381 cccgccgatg gcaaccgtcc gcacatccac gagccgcccg gcgccacgaa acagccgcgc
     1441 accggtcgtc tgtagggcca gcgcgggccg tgtgtcgtcg agctcccgca ccatccagcg
     1501 cacgcgctgc atcaccttcg ggaagtcgac ggtccactcg actcgcgacg ccgcgagcac
     1561 ccgcgcacga gccgcctcgc tcaagctttc acccgagcgg agtagggttt tcgacggcac
     1621 acagccccag tacgggcact cgccgccgac gagctcacgc tccacgacgg cgagcgtcag
//
LOCUS       DATIML010001171         3345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1692470, whole genome shotgun sequence.
ACCESSION   DATIML010001171 DATIML010000000
VERSION     DATIML010001171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692470"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VLJ38_20180"
     CDS             <1..557
                     /locus_tag="VLJ38_20180"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU41914.1"
                     /translation="REAATELCKKLDALGWDYEVILSENGSRDGTLDILRELPKSLPR
                     VRHLHGEEPNYGKALKRGILEARGEVVICDEIDLCDVGFYLRAVPMLEEGADLVVGSK
                     AMKGANDGRPFVRRLATRTITVLLRIVTGFRGTDTHGLKAFKRERLTELRRLARLGET
                     LLTSLVAGKTVDPTPFLKMYGGGS"
     gene            554..1267
                     /gene="ubiE"
                     /locus_tag="VLJ38_20185"
     CDS             554..1267
                     /gene="ubiE"
                     /locus_tag="VLJ38_20185"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052624 - 2-phytyl-1,4-naphthoquinone
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0042372 - phylloquinone biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HSU41915.1"
                     /translation="MTAESKTLGSGQMFDGIAARYDFVNRVISLGIDQSWRRRTVRAL
                     KLPEGARVLDLATGTGDLALLIARAAPSSRVVGLDPSHNMLEIARTKVEKAGLGERVE
                     LVLGDAETLPFEDATFDGVSIAFGIRNVPNRQRALAEMARVTKPGGRVAVLELSEPRG
                     GVLGPLVRFHVHSVVPTLGALLSGAPEYRYLQRSIAAFPPADEFAAMLGAAGLEVERP
                     HPLTFGVCHLYVGTRGAKP"
     gene            1264..2670
                     /locus_tag="VLJ38_20190"
     CDS             1264..2670
                     /locus_tag="VLJ38_20190"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008909 - isochorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HSU41916.1"
                     /translation="MSASLEHSSYPAPAPSLERFESALADGLTEAVRQAEATLVALPA
                     PLAPLEALLLGTHDNAVAWAAPSGFELAALGFSRVVEASGTARFRRIAEAGGELVART
                     RAVGLLGASAFAPKLFGGFSFAARAPRSELWQPFGEARFVLPALAYVVENGAARLVVT
                     AMRSELESPRARQSVIEAATRAFATLERGAPSLPATAGVEIRRSERPESEWVALVEAI
                     REDIARGTLEKVVLARRLEIELAANVDPAVVLARLRQQAPECARFLVRQSGSTFLGAT
                     PEWLARKRGPVLETAAVAGSMSSHDREGAARLLESGKDRAEHAIVLREILRALAPLAT
                     NVEHGDPPELYQLRHVLHLRSRVRATLKGSQHLLDVVEQLHPTPAVGGMPRTRALEWI
                     ETHEPDERGWYSGPVGWFDAAGDGDMAVALRSGVLSGRLAELYGGAGIVDRSSPAAEF
                     AETRWKLAALLGALGIAD"
     gene            2690..>3345
                     /locus_tag="VLJ38_20195"
     CDS             2690..>3345
                     /locus_tag="VLJ38_20195"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSU41917.1"
                     /translation="MNAALIGEWSRLLAASLVEAGIVHAVVCPGSRSTPFAWALAERP
                     ELVCHSLIDERDGAFFALGLARVTGEPALVLSTSGSAAANFFPAIVEARLARLPLLVV
                     TADRPLELQAAEAAQTIDQVKLYGDHVRAFFDLGAPDAAPSALAGLKRSVLQAVLATR
                     QPECGPVHLNARARKPLEPTPATPNDRALVAAVEGLLQRGPTRVSRAALTADPVAIAE
                     L"
BASE COUNT          477 a         1186 c         1170 g          512 t
ORIGIN      
        1 tgcgcgaagc ggccaccgag ctgtgcaaga agctcgatgc gctcggttgg gactacgagg
       61 tcatcctctc cgagaacggc tcgcgcgacg gcaccctcga catcctgcgc gagctgccga
      121 agagcttgcc ccgcgtccgc cacctccacg gcgaagaacc gaactacggc aaggcgctca
      181 agcgcggcat cctcgaggcg cgcggcgagg tggtgatctg cgacgagatc gatctctgcg
      241 acgtcggctt ctacctgcgc gccgttccca tgctcgaaga aggcgccgat ctggtggtgg
      301 gatccaaggc gatgaaaggg gcgaacgacg ggcggccctt cgtccgccgg ctggcgacgc
      361 gcaccatcac cgtgctgctg cgcatcgtga cggggtttcg cgggaccgac acgcacgggc
      421 tcaaggcgtt caagcgcgag cggctcacgg agctcaggcg actcgcgcgg ctcggcgaga
      481 cgctgctcac ctcgctcgtg gcaggcaaga ccgtcgatcc cacgccgttt ctcaaaatgt
      541 acggaggcgg ctcgtgaccg ccgagtccaa aacgctcggc tccgggcaga tgttcgacgg
      601 catcgccgcg cgctacgact tcgtgaaccg ggtcatttcg ctcggcatcg accagagctg
      661 gcggcgccgc acggtacgcg cactcaagct gcccgaaggc gcgcgcgtgc tcgatctcgc
      721 cacgggcacg ggcgacctcg cgctcctcat tgcgcgcgcc gcgccgagct cgcgcgtggt
      781 cggcctcgat ccgtcgcaca acatgctcga aatcgcgcga acgaaggtcg agaaggccgg
      841 cctcggcgag cgcgtcgagc tcgtgctcgg cgacgccgag acgctgccct tcgaggatgc
      901 gacgttcgac ggcgtgtcga tcgccttcgg gatccgcaac gtgccgaatc ggcagcgagc
      961 tttggcggag atggcgcgcg tgaccaagcc gggcggccgc gtcgcggtgc tcgagctgtc
     1021 ggaaccgcgc ggaggcgtac tcgggccgct cgtgcgtttt cacgtgcatt cggtggtccc
     1081 gacgctcggc gcgctcttgt cgggcgcgcc ggagtaccgc tacttgcagc gctcgatcgc
     1141 ggcattccca ccggctgacg aattcgcggc catgctgggg gcggcagggc tcgaggtcga
     1201 gcggccgcat cccctcacct tcggtgtttg ccacctctac gtcgggacgc gaggtgcgaa
     1261 accatgagcg cttcgctgga acactcgtcg tacccggcgc ctgcgccgtc gctcgagcgc
     1321 ttcgaatcgg cgctcgccga cggcctgacg gaagctgtcc gccaagcgga ggcgacgctc
     1381 gtcgccttgc cggcgcccct cgcaccgctc gaggcgttgc tgctcggaac ccacgacaac
     1441 gccgtcgcct gggcggcacc gtccggcttc gagctcgcgg cgctcggatt ttcacgcgtg
     1501 gtcgaggcga gcggcacggc acgttttcgg cgcattgcgg aggcgggcgg cgagctcgtc
     1561 gcgcggacgc gcgcggtggg tttgctcgga gccagcgcct tcgcgccgaa gctgttcggc
     1621 gggttctcgt tcgcggcgcg cgcgccgcgg tccgagctct ggcagccgtt cggggaagcg
     1681 cgcttcgtgc ttcccgcgct cgcctacgtg gtcgagaacg gcgcggcgcg gctcgtcgtg
     1741 acggccatgc gctcggagct cgagtcgccg cgcgcgcgcc agagcgtgat cgaagccgca
     1801 acgcgggcgt tcgcgacgct cgaacgcgga gcgccgtcgt tgccggccac ggccggcgtg
     1861 gaaatacgcc gcagcgagcg acccgagagc gagtgggtgg cgctcgtcga ggccatccgc
     1921 gaggacatcg cgcgcggtac gctcgaaaag gtcgtgctcg cgcggcggct cgagatcgag
     1981 ctcgccgcca acgtcgatcc ggcagtcgtg ctggcacgcc tgcgacaaca agcgcccgag
     2041 tgcgcgcgct tcctcgtgcg tcagagcggt tccacgttcc tcggcgcgac gcccgaatgg
     2101 ctcgcgcgca aacgtggacc ggtgctcgaa acggctgccg tggctgggtc gatgagcagc
     2161 cacgatcgcg aaggcgcggc acgtctgctc gagagcggca aagatcgagc ggagcacgcg
     2221 atcgtgctgc gtgaaatctt gcgcgcgctc gcgccgctcg ccaccaacgt cgagcacggc
     2281 gatccgccgg agctctacca actgcgacac gtgctccatt tgcgttcacg cgtgcgggcg
     2341 accctcaagg gcagccaaca cctgctcgac gtcgtcgagc agctccaccc gacgcccgcc
     2401 gtcggcggca tgccgcgcac ccgcgcgctc gaatggatcg agacgcacga gccggacgag
     2461 cgcggctggt attccggccc cgtgggctgg ttcgacgccg cgggcgacgg cgacatggcc
     2521 gtggccctgc gttcgggcgt gctctcgggg cgcttggccg agctctacgg tggcgccggc
     2581 atcgtcgatc gctcgtcacc ggcggccgag ttcgccgaga cacgctggaa gctcgccgcg
     2641 ctgctcggcg cgctgggcat cgcggactga ttcacgtcgg cgaggagcga tgaacgcggc
     2701 gctaatcggc gaatggtcac gcctcttggc cgcgagcctc gtcgaggccg gcatcgtgca
     2761 cgcggtcgtt tgcccgggat ccaggtcgac gccgttcgcg tgggcgctcg ccgaacggcc
     2821 cgagctcgtg tgtcactcgc tcatcgacga gcgcgacggc gccttcttcg ccctcggcct
     2881 cgcgcgcgtc acgggcgagc cggcgctcgt actttcgacc tcgggcagcg ccgccgccaa
     2941 ttttttcccc gcgatcgtcg aggcacgcct cgcgcggctc ccgctcctgg tcgtgacggc
     3001 cgatcgtccg ctcgagctcc aagccgcgga agccgcccaa acgatcgatc aggtcaagct
     3061 ctacggcgac cacgtgcgcg cctttttcga tctcggcgcg cccgacgctg cgccgagcgc
     3121 gctcgccggg ctcaagcgca gcgtgctcca agccgtgctc gcgacgcggc agccggaatg
     3181 cggccctgtg cacttgaacg cgcgcgcacg taaaccgctc gagcccacgc cggcaacgcc
     3241 gaacgatcgg gcgctcgttg cagcggtaga gggactcctg cagcgtggcc cgacacgcgt
     3301 ctcccgtgcc gcgctgacgg ccgatcccgt cgcgatcgcc gagct
//
LOCUS       DATIML010001172         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4575887, whole genome shotgun sequence.
ACCESSION   DATIML010001172 DATIML010000000
VERSION     DATIML010001172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4575887"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..786
                     /locus_tag="VLJ38_20200"
     CDS             <1..786
                     /locus_tag="VLJ38_20200"
                     /inference="COORDINATES: protein motif:HMM:NF015509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HSU41918.1"
                     /translation="IDICVPATILRLVPKLTLGSGLIVLVIVPWALAGVAYVVVRLVE
                     RPLGLDRTQRTALFLATALGNTSFIGFPLCSALLGERSIPLAAVYDQLGSFLLLSTVA
                     PIALGAVTAGVRPRPSEIARRVLLFPPMIALLVALLPLPHPTLLEPLYAAASTPLVPL
                     AVVAVGLKLRLTPPRPLRVFAFGLTLKLLLLPIAAWAIARALGAPAFVTKVAVLESAM
                     PTMITAGALMMAYRVAGELAAAFVGWGLLIALVTVPVWSFILR"
     gene            complement(773..1963)
                     /locus_tag="VLJ38_20205"
     CDS             complement(773..1963)
                     /locus_tag="VLJ38_20205"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HSU41919.1"
                     /translation="MWRWVLLVGALLVHVLVGLRPVYEHARRTDGRDFASYYYAFRVA
                     SAGGDPYDTPALERLARREHTRKRVNPFFYPPPFLLTQAFAGKLTLRQGFLCLLALNE
                     LLLAACAFMCVRWYGVAGWVMALMVALYSPIFDHAEMGQANLLVLAPLLAGLGLAAKK
                     PWLGGALVGVAAMLKMSPALMLAYFVLERRVPALVAAALAALALSVATLPLVGFEAQR
                     RFYFEVLPSFSSGEYHGLALPIGMTSNHSIPAFFNRLWRGPDGHHLSQAASSATTFTA
                     VLLLALWAYRFRGSLRDPDANAIGALLVLMTLLPVYTYEHHLVFLVLALGAAAMTRPG
                     PVLLVVAFFLAWPLAWQRGAEDALPPLKGLLRDSKLCAALLLFGLNLLAPRPRALPRW
                     LNAK"
BASE COUNT          348 a          708 c          727 g          329 t
ORIGIN      
        1 atcgacatct gcgtcccggc gacgattctg cgcctggtgc ccaagctgac gctcggcagc
       61 gggctcatcg tgctcgtcat cgtgccgtgg gcgttggccg gcgtggccta cgtcgtcgtt
      121 cggctcgtgg aacgtccgct cgggctggat cggacgcagc gtaccgcgct gtttttggcg
      181 acggcgctcg gcaacacgtc gttcatcgga tttccgctgt gcagtgcgct gctcggcgag
      241 cgctcgatcc cgctcgccgc cgtttacgac cagctcggtt cgtttctgct cttgagcacc
      301 gtggcgccga tcgcgctcgg cgccgtcacg gcaggcgtcc gcccgcgacc gagcgagatc
      361 gcgcggcgcg tgctgctgtt tccgcccatg atcgcgctgc tcgtggcgct cctgccgttg
      421 ccgcacccga cgctgctcga gccgctctat gccgccgcgt ctacgccgct cgtgcccctc
      481 gccgtcgtgg cagtgggctt gaaactccgc ctcactccgc cgcggccgct gcgtgtcttc
      541 gctttcggcc tgacgctgaa gctcctgctc ttgcccatcg cggcgtgggc catcgcgcgc
      601 gcgcttggcg caccggcttt cgtcaccaag gtcgcggtgc tcgagagcgc catgcccacg
      661 atgatcacgg ctggtgcctt gatgatggcc tatcgagtcg cgggcgagct cgcggcggct
      721 ttcgtcggct gggggctcct catcgcgctc gtgacggtcc ccgtctggtc cttcattttg
      781 cgttgagcca gcgcggcagg gcgcgcgggc gcggagcgag caggttcaag ccgaatagca
      841 gcagcgccgc gcagagctta ctgtcccgca gcagcccttt cagcggcgga agagcgtcct
      901 cggcaccgcg ctgccaggcg agcggccaag ccaaaaagaa cgcgacgacg agcagcacgg
      961 ggcccggtcg cgtcattgcc gccgcaccga gcgccagcac caaaaaaacc aagtgatgct
     1021 cgtaggtgta gacggggagt aaggtcatga gcacgagcag cgctccgatc gcgttcgcgt
     1081 cggggtcgcg cagtgagccc cgaaaacgat aggcccagag cgcgaggagc agcacggccg
     1141 tgaacgtggt cgcgctgctc gcggcctgtg agaggtggtg gccgtcgggg ccgcgccaga
     1201 gacgattgaa gaaggccggg atcgagtggt ttgaggtcat gccgatcggc agcgcgagcc
     1261 cgtggtattc gcccgacgaa aagctcggca agacctcgaa gtagaagcga cgttgcgctt
     1321 cgaatccgac gagcggcagc gtcgccacgg agagcgcgag cgccgcgaga gcagccgcca
     1381 cgagcgccgg cacgcgccgc tcgagcacga agtaagcgag catcaacgcg gggctcatct
     1441 tcaacatggc cgcgacgccg acgagcgcgc cgccgagcca cggcttcttc gccgcgagcc
     1501 cgagcccggc gagcagcggc gcgagcacga gcagattggc ctgacccatc tcggcgtgat
     1561 cgaagatggg cgaataaagc gcgaccatca gcgccatcac ccagcccgcc acgccgtacc
     1621 agcgcacaca catgaaagcg cacgccgcga gcaagagctc gttcaacgcg agcaggcaca
     1681 gaaagccttg ccggagcgtc agcttgccgg caaaggcttg tgtcagcaga aacggcggcg
     1741 ggtagaagaa gggattgacg cgcttgcgcg tgtgttcgcg gcgcgcgagt cgctcgagcg
     1801 cgggcgtgtc gtacggatca ccgccggcgc tcgcgacgcg gaacgcgtag tagtagctcg
     1861 cgaaatcgcg tccgtccgtc ctgcgcgcgt gctcgtagac gggacggagc ccgacgagga
     1921 catgcacgag gagcgccccg accaaaagaa cccaacgcca cacggggcgc gagtgtacgt
     1981 cagggcggcc gcgcggcgag cccaattgcg cgtttgtcgc gcctcgggca ggctgtcgag
     2041 gccatgttga tcgtccacat cgacgttcgc gtgaaacccg agggcgtcga aacgtttcgg
     2101 cgcgccacga tc
//
LOCUS       DATIML010001173         1839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1403872, whole genome shotgun sequence.
ACCESSION   DATIML010001173 DATIML010000000
VERSION     DATIML010001173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403872"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VLJ38_20210"
     CDS             complement(<1..696)
                     /locus_tag="VLJ38_20210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41920.1"
                     /translation="MLRPPAVRAPAEQGRVVLAAVLDALPAGLAGSEIERAFVRSRAS
                     AREALVLLVTETAFALAAERRGLLASAAGFVRRETGAARRAWCFGAETFDSALDAALR
                     ALEASHGGAQVTALAPEQLGEFYEGLLATGVALARTDSVIVSEARPAGGAAVDRLVAA
                     GPASKSGFVASVPAGRIALLGTVERRRSGSHYTPRELTERVVAETLEPLLGFAPTAES
                     ILALRVCDPAMGTG"
     gene            complement(707..1564)
                     /locus_tag="VLJ38_20215"
     CDS             complement(707..1564)
                     /locus_tag="VLJ38_20215"
                     /inference="COORDINATES: protein motif:HMM:NF042696.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSU41921.1"
                     /translation="MSDATARPCPPSPAPACTNATEPQPKLGKARGPLLQPAGTRTGR
                     VSPSSDLAPFVEHYWWVCWDVPEPQVAEVLSYPSIHVTFEGNHARIVGVVRAKFTRRL
                     EGRGDLFAVKFRPGMFRPWYAAPAIRLTNRTEMLGDELGAPASVLLEEIFAAPDELAR
                     AKILEARLRVALPPLDADAELARDLVERVRREPTLNSVAALCEATGLTPRSVQRLFRD
                     YVGVGPKWVVRRFRLQEAAALLETSEETVGAVAARLGYFDQAHFVRDFKAVVGETPSE
                     YLRRARTRR"
     gene            1629..>1839
                     /locus_tag="VLJ38_20220"
     CDS             1629..>1839
                     /locus_tag="VLJ38_20220"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSU41922.1"
                     /translation="MSYSSATSLFIHATRERVWRALTEPALVKQYLFGTTLETTWQIG
                     APLVFRGEWEGKAYEDRGTVLAFEPM"
BASE COUNT          301 a          642 c          626 g          270 t
ORIGIN      
        1 tccggttccc atcgcgggat cacagacgcg cagcgcgaga atgctctcgg cggtcggcgc
       61 gaagccgagc agcggctcca gggtttcggc gaccacgcgc tcggtgagct cgcgcggcgt
      121 gtagtgcgaa cccgaacggc ggcgttccac ggtgccgagc aaggcgatgc gcccggcggg
      181 cacgcttgca acgaagccgg atttcgaggc gggacccgca gcaaccaacc gatcgacggc
      241 ggcgccaccg gcgggtcgcg cctcgctcac gatcacgctg tccgtgcgcg cgagcgcgac
      301 acccgtcgcg agcaggcctt cgtaaaactc accgagctgc tcgggcgcga gcgccgtaac
      361 ctgcgccccc ccgtgcgacg cctcgagcgc tctgagcgct gcgtcgagtg ccgaatcgaa
      421 cgtctccgct ccgaagcacc aggcgcgacg cgcggctccc gtttcccggc gtacgaaccc
      481 ggcagcgctc gccagtaggc cgcgtctttc ggcggcgagc gcaaacgccg tttccgtcac
      541 gagcaagacg agcgcttcgc gtgccgacgc gcgactccgc acgaacgcgc gctcgatttc
      601 cgaccccgcc aacccagccg gcaacgcgtc gagcacggcc gcgagcacca cgcgaccttg
      661 ctcagccgga gcgcggaccg ccggagggcg aagcatcgag gatattctat cgtcttgtgc
      721 gggcccggcg caggtattcc gacggtgttt cgcctaccac cgccttgaaa tcgcgaacga
      781 agtgcgcttg gtcgaagtaa ccgaggcgag cggcaacggc gcccacggtc tcttcgctgg
      841 tttcgaggag cgcggcggct tcctgcagcc gaaagcggcg aacgacccat ttcgggccga
      901 cgccgacgta atcgcgaaag agacgctgca cgctgcgtgg cgtgagcccg gtcgcttcac
      961 aaagcgcggc cacgctgttc agcgtgggct cgcggcgcac gcgttcgacc aggtcgcgcg
     1021 cgagctccgc atccgcatcg aggggcggca gcgcgacgcg gagccgcgcc tcgaggatct
     1081 tcgcgcgcgc gagctcgtcc ggcgcggcga agatttcttc gaggaggacg gaggcgggcg
     1141 caccgagctc gtcacccagc atctcggtgc ggttcgtgag gcgaatcgcg ggcgcggcgt
     1201 accagggccg gaacatgccg ggccggaact tcacggcgaa caagtcaccg cgaccctcga
     1261 gccggcgcgt gaacttcgcg cgcacgacgc cgacgatgcg cgcgtgattg ccctcgaacg
     1321 tcacgtgaat cgacgggtac gagagcactt cggcgacttg cggctccggg acgtcccaac
     1381 atacccacca gtagtgctcg acgaacggag ccagatcgct cgacgggctc acgcgccccg
     1441 tgcgggtgcc ggccggctgc agcagcggcc cgcgcgcctt gccgagcttc ggctgcggct
     1501 cggtcgcgtt tgtacaagcc ggcgccggtg atggtgggca tggtcgggcc gtggcgtcgg
     1561 acatggctag cctcgggatt ttcccgagca agcaccgcgc caccacccat tttcgaaagg
     1621 agctcgaaat gtcctactct tccgccactt ctctcttcat tcacgcgacg cgcgaacgag
     1681 tctggcgcgc gctcaccgag ccggcgctcg tgaagcagta cctgttcggt acgacgctcg
     1741 agaccacgtg gcagattggc gctccgctcg tgtttcgcgg cgagtgggag ggcaaagcgt
     1801 acgaggatcg cggcaccgtg ctcgctttcg agcccatgc
//
LOCUS       DATIML010001174         5572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5734008, whole genome shotgun sequence.
ACCESSION   DATIML010001174 DATIML010000000
VERSION     DATIML010001174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5572
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5734008"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VLJ38_20225"
     CDS             complement(<1..520)
                     /locus_tag="VLJ38_20225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSU41923.1"
                     /translation="MNAGRGTARAALGVLFALMGACSERAAPKLPEQRLPPGVVAVVG
                     GERIAAGTVARIAARGEAPLEARRRAIEDALFAAAARQNPALAARVRVAERGVLARAL
                     LERLRDDAQALGPPTDDEISVLTARRWPELDRPPSAGTSHAVVLVKTPADDAPARALA
                     DELAAALKAVKSG"
     gene            complement(517..717)
                     /locus_tag="VLJ38_20230"
     CDS             complement(517..717)
                     /locus_tag="VLJ38_20230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41924.1"
                     /translation="MSDRAFMGRVANAVNIALLVAAAASFVLGLRALGDRRDVQALYF
                     LLVGAIALRSATDMLRPRSSSR"
     gene            complement(714..1424)
                     /locus_tag="VLJ38_20235"
     CDS             complement(714..1424)
                     /locus_tag="VLJ38_20235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41925.1"
                     /translation="MIASAEPPETLPLTERTRVLLPGLYAWLLTVGLPVMARGVRSGP
                     RFTAALALVTLLLALSIVGQRLAVARALGIYLFVFCSALTWALLGSDLSPAHLDRVRT
                     ALGTLGWVLYAFGWGRVRTLPEAAGEPQIGPGAPLVPRARLHTRAVPIVAFSVCTALV
                     CEGLAFRVDRPEHAVLAHGAAAACALLVLSAGSRIALAQGTRVELASGAQRLNAVALR
                     GALLAVLFAVGLVWAALK"
     gene            complement(1447..2925)
                     /locus_tag="VLJ38_20240"
     CDS             complement(1447..2925)
                     /locus_tag="VLJ38_20240"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HSU41926.1"
                     /translation="MTASIELGSGDPARAALDVLAVCVEEGSLERSPWIGPLETALGG
                     GLVAHAKLVEFTGKAEQVLDVSTLGRIKARRVLIVGVGARPKLDAARLRSAVATAVRA
                     SSGTGVTRVGIALPADVDWRQVGEAAGLGAYRFVKYFTGERRPKSELKKIVVFGQGRQ
                     GTSARRELALGAEIAAAVALARDAVNEPPNVLTPEALAQIARRIAKSGKLGLKVLDKR
                     GIRAAGMNLHYAVGQGSAHEPRFIHLSYAPRGSVKRLVFVGKGLTFDSGGLCIKPAAG
                     MGEMKSDMGGAAAVLGLMAAVARLKPRVEVHGIIGAAENMPDGEAYRPADVFKSLSGK
                     TVEIINTDAEGRLVLADALAYAARLEPDLVIDAATLTGAALIALGKTCSAYYATSDDL
                     AQKLEAAAREAGESFWRMPLFDEYAEQLKSDIADFKHTGDRYGGSILAALFLREFVGG
                     FPWIHCDVAGPVLAERARGIYPKGATGHPVLTFVNLVESFAR"
     gene            3100..3807
                     /locus_tag="VLJ38_20245"
     CDS             3100..3807
                     /locus_tag="VLJ38_20245"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU41927.1"
                     /translation="MPRAVLVSGAGGALGAALVAHFAQTDAVVVAVGRSVVQAELDAK
                     FGAGRTLAASLELASPAAWRELVERLARAELAVDGAVLAAGGWRGGAPLSETADDVWS
                     SMIALNLETARVSLQALLPDMLGARRGSIVLVASLAAARPWESAGAAAYAASKAAALA
                     LVQATAAEVLASGVRVNAILPSTIDTPANRSAMPKADFARWVAPESLAEVAGFLLSDA
                     ARDISGAALPVYGRVGV"
     gene            complement(3870..4613)
                     /locus_tag="VLJ38_20250"
     CDS             complement(3870..4613)
                     /locus_tag="VLJ38_20250"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HSU41928.1"
                     /translation="MQGWSAGHLIARRDWAPGLATLAIAAEIEPFEPGQFVNLGLEVS
                     GAIERRSYSIASAPGGPLGFLVTEVQEGRLTPHLMRLAPGDPVFVEPKPQGYFTLKWV
                     PNARELWLVATGTGLGPFLSILASEEPWRRFERIVLVHGVREKSQLAHRDELTQLAAA
                     RGGRLAVVAALSREAASEGLLHGRITSLLAAGELERAAATPLDAARSHVMLCGNPAMI
                     EEMTKLLGERGLRKHRVRTPGHITIEKYW"
     gene            4747..>5572
                     /locus_tag="VLJ38_20255"
     CDS             4747..>5572
                     /locus_tag="VLJ38_20255"
                     /inference="COORDINATES: protein motif:HMM:NF025597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYF domain-containing protein"
                     /protein_id="HSU41929.1"
                     /translation="MSVTCPSCGKSFQLAQEIYDRKVAGKIVSIRCKQCQAGIRIDAT
                     QPGGLRVLGATPATNESAQGVRARQPTLIGMMGPSGAVTSGASAEGALWAVDSGGNGE
                     DRELDDATIAREIAAGMIGPATLVWRDGMSDWLEVQQVPQLAKHLLAAKPAEPPKVAA
                     PLPSAPAKQTSAPEAAALPPVEPKRPAPAPAAPAPPAPAAAAPAPPAPAAAAPAPPAP
                     AAAAPAPPAPAPAATAPAPPAPAATAPAPLAPAARPAATKPTGGALPGVPVMHEEED"
BASE COUNT          896 a         1950 c         1963 g          763 t
ORIGIN      
        1 ccccggattt tacggctttg agcgccgcag cgagctcgtc tgccagagcg cgagcgggag
       61 cgtcgtcagc cggtgtcttc acgaggacga cagcgtgcga cgtgccggcg ctcggcggcc
      121 gatcgagctc gggccaacgc cgcgccgtga ggaccgagat ttcgtcatcg gtcgggggcc
      181 cgagggcctg ggcgtcgtcg cgcaaacgct cgagcagagc gcgcgcgagc accccacgtt
      241 cggcgactct cactcgcgcg gcgagcgccg gattttgacg cgccgcggcg gcaaacaggg
      301 cgtcctcgat ggcgcggcgg cgcgcttcga gcggcgcctc accgcgcgcc gcgatccgcg
      361 cgacggtgcc ggccgcgatg cgctccccgc ccacgacggc caccacgccg ggcgggagcc
      421 gctgctccgg caatttcggt gcggcgcgct cgctgcaggc gcccatcaac gcgaaaagga
      481 cgccgagggc cgcccgcgcg gtgcccctgc cggcgttcat cggctggagg acctcggccg
      541 caacatgtcc gtcgccgagc gcagcgcaat cgcgcccacg aggagaaagt acagcgcttg
      601 tacgtcgcgg cggtcgccga gcgcgcgcag gccgagtacg aacgaagccg cggccgcgac
      661 gaggagcgcg atgttcaccg cgttcgcgac ccggcccatg aacgctcgat cactcatttg
      721 agcgccgccc agaccaagcc gaccgcgaag agcacggcga gcagagcgcc gcgcaacgcg
      781 accgcgttca gtcgctgagc gcctgacgcg agctcgacgc gagtgccttg ggcgagcgcg
      841 atacgcgagc cggcgctcaa cacgagcaac gcacaagccg ccgcggcacc gtgcgccagc
      901 accgcgtgct cggggcgatc gacccgaaac gcaaggcctt cgcagacgag cgccgtgcaa
      961 accgaaaacg cgacgatggg cacggcgcgc gtatgcaggc gtgcgcgagg gacgagcgga
     1021 gctcctggcc cgatttgtgg ttcccccgct gcctccggaa gcgtgcgcac gcggccccag
     1081 ccgaacgcgt aaagcaccca accgagcgtg ccgagcgccg tgcgcacgcg gtcgagatgg
     1141 gccggggaga gatcgctccc gagcagcgcc caggtgagcg cggaacaaaa aacgaacagg
     1201 tagatcccga gcgcgcgcgc gaccgcgagt cgctgcccga cgatcgagag cgcgagcagc
     1261 aacgtgacga gcgcaagagc cgccgtgaat cgcggcccgc ttcgtactcc gcgcgccatc
     1321 accggcaagc cgaccgtgag cagccaggcg tagaggcccg gcaggagcac gcgcgtgcgc
     1381 tcggtgagcg gcagcgtttc gggcggctcg gcggaagcga tcatcgtccg agcgagccct
     1441 gacgcctcag cgggcgaagc tttcgaccag gttcacgaac gtgagcacgg ggtgaccggt
     1501 cgcgcctttc ggatagatgc cgcgcgcgcg ctcggcgagc acgggcccgg cgacgtcgca
     1561 atggatccag gggaaaccgc cgacgaattc gcgcaagaag agcgcggcga gaatggagcc
     1621 cccgtagcga tcgcccgtgt gcttgaaatc ggcgatatcg ctcttgagct gttcggcata
     1681 ctcgtcgaaa agcggcatgc gccagaagga ttcaccggcc tcgcgcgccg ccgcctcgag
     1741 cttctgggcg aggtcgtcgc tcgtggcgta gtaggccgag caggtcttgc cgagcgcgat
     1801 gagcgcggcc cccgtgagcg tcgccgcgtc gatcacgagg tcgggctcga gccgcgcggc
     1861 gtaggcgagc gcgtccgcga ggacgagccg tccttcggcg tcggtgttga tgatctcgac
     1921 cgtcttgccc gacagggact tgaagacgtc ggcggggcga taggcttcgc cgtctggcat
     1981 gttttcagcc gcgccgatga tgccatggac ttcgacgcgc ggcttcaagc gagcgaccgc
     2041 cgccatcaag ccgagcacgg ccgcggcgcc gcccatgtcc gatttcatct cgcccatgcc
     2101 cgccgcgggt ttgatgcaaa ggccgcccga gtcgaacgtg aggcccttac cgacgaacac
     2161 gaggcgcttc accgagccgc gcggcgcgta gctcaaatga atgaagcgcg gctcgtgcgc
     2221 gctgccctgg ccgaccgcgt aatgcaggtt catgccggcc gcgcgaatgc cccgtttatc
     2281 gaggactttg agcccgagct tgccgctctt cgcgatgcgg cgcgcgatct gcgcgagggc
     2341 ttcgggtgtg agcacgttcg gtggttcgtt gactgcgtcg cgggcgagcg cgaccgccgc
     2401 ggcgatctcg gcgccgagcg ccagctcccg ccgcgcgctc gtgccctgcc gaccctgacc
     2461 gaagaccacg atcttcttga gctcggattt cggacggcgc tcacccgtga agtatttgac
     2521 gaaacggtaa gcaccgaggc ccgctgcttc gccgacctgg cgccaatcga catcggccgg
     2581 gagcgcgatg ccgacgcgcg tcacgccggt tcccgaggag gcgcgcacgg cggtcgcgac
     2641 ggccgagcgc aagcgcgccg cgtcgagctt cggccgcgcg ccgacgccga cgatcagcac
     2701 gcggcgggct ttgatgcggc cgagggtcga gacgtcgagc acctgctcgg ccttgcccgt
     2761 gaactcgacg agcttcgcgt gcgcgacgag cccgccgccg agcgccgtct cgagcggccc
     2821 gatccacggg cttctttcga gcgagccctc ttcgacgcag acggcgagca cgtcgagcgc
     2881 cgcgcgcgcc ggatcgcctg acccaagttc aatcgacgca gtcatcggga tttggctgac
     2941 gaaggtagtg ctccgtgcgc gcggtcgcaa atcgtccgtg agccgcgcgt cacacacccg
     3001 gcgcggcaaa gcgctgctag catcgcgaag ccccatgttc ccggccctga tgtggacgtt
     3061 tcgccgtggt tccctcgcgt actgccggcg ggcgctctga tgccgcgcgc ggtgctcgtt
     3121 tcgggggccg gcggtgcgct cggggcggcg ctcgtggcgc attttgcgca aaccgacgcc
     3181 gtcgtcgtgg cggtggggcg cagcgtcgta caggcggagc tcgacgcgaa gttcggcgcg
     3241 ggtcgcacgc tcgcggcatc gctcgagctc gcctcgccag cagcctggcg cgaactcgtg
     3301 gagcggctcg cacgcgcaga gctcgccgtc gatggcgccg tgctcgcggc cggcggctgg
     3361 cgtgggggcg caccgctcag cgaaaccgca gacgatgtct ggtcgtcgat gatcgcgctg
     3421 aatctcgaga cggcgcgcgt gtcgctgcag gcgctcttgc ccgacatgct cggcgcgcga
     3481 cgggggagca tcgtgctcgt cgcgtcgctc gcggcggcgc gaccttggga aagcgcgggg
     3541 gcggcggcgt acgcggcgtc gaaggcggcg gcgctcgcgc tcgtgcaagc gacagcggcg
     3601 gaagtgctcg cgagcggcgt gcgcgtgaac gcgattttgc cgagcacgat cgatacgccg
     3661 gcgaaccgga gcgccatgcc caaggctgat tttgcgcgtt gggtggcgcc cgagtcactc
     3721 gcagaagtag cggggtttct gctgtctgac gctgcgcgcg acatttcggg cgcggcgctg
     3781 ccagtgtacg gacgcgtcgg cgtgtgacgg cggcgcggct ggtggagcgt ctcgacgcgt
     3841 agccgctctg cccgccgaac gctgcgccgt caccaatact tttcgatcgt gatgtgaccg
     3901 ggggtgcgca cgcgatgttt acgcaagccg cgctcgccga ggagcttcgt catttcctcg
     3961 atcatcgccg ggttgccgca gagcatcacg tgcgagcgcg cggcgtcgag cggcgtggcc
     4021 gcggcgcgct cgagctcacc cgcggcgagc aggctcgtga tgcgtccgtg gagcaggcct
     4081 tccgacgcag cttcgcgact gagcgccgca acgacggcca agcgtccacc tcgcgcggcg
     4141 gcaagctgcg tgagctcgtc gcgatgagcg agctggctct tttcacgcac gccgtgcacg
     4201 agcacgatgc gctcgaaccg ccgccacggc tcttcacttg cgagaatcga gagaaatggg
     4261 ccgagcccgg tacccgtcgc gaccagccag agctcgcgcg cattcggcac ccacttcaat
     4321 gtgaagtagc cctgtggctt cggctcgacg aacacggggt cgcccggcgc gaggcgcatg
     4381 aggtgcgggg tcaacctacc ttcctgcacc tcggtcacca aaaagccgag cggcccgccg
     4441 ggagcggagg cgatcgagta ggagcgccgc tcgatggcgc ccgaaacttc gagcccgagg
     4501 ttcacgaact gaccgggctc gaatggctcg atttcggctg caatcgcgag cgtcgcgagc
     4561 cccggcgccc agtcgcgccg ggcgatgaga tgccctgctg accagccttg catcgacccc
     4621 ggttcgataa ccccggctgg acccgcgagc aaggcgccga aaaagcgggc gcagcgtcgc
     4681 acgtcccatc tacccaaaaa acgcggcgaa tacgcaggga gcgtgtacgc taagaggagg
     4741 atggcgttgt cggttacgtg cccctcctgt ggcaagtcgt tccagctcgc gcaggagatc
     4801 tacgatcgca aagtagcggg caagatcgtc tcgatccgct gcaagcagtg ccaagcggga
     4861 attcgcatcg acgcgacgca accaggcggg ctccgagtgc tcggtgcgac gccggcgacg
     4921 aacgagagtg cgcagggcgt gcgggcgcgc cagccgacgc tcatcggcat gatgggaccg
     4981 agcggcgccg tgacgagcgg cgcgagtgcg gaaggcgcac tctgggcggt cgatagcggc
     5041 ggcaacggcg aggatcgcga gctcgacgac gccacgatag cgcgcgagat cgccgcgggt
     5101 atgatcggcc cggcgacgct cgtctggcgc gacggcatga gcgactggct cgaggtgcag
     5161 caggtgcccc agctcgccaa gcacctgctc gccgccaaac cagccgagcc tccgaaagtc
     5221 gcggctccgt tgccgtctgc gccggctaaa caaacgtcag cgcccgaagc cgccgcgctg
     5281 cctccggttg aacccaagcg tcccgcaccc gcgcccgccg caccggcacc ccctgcaccc
     5341 gcagccgctg caccggcacc ccctgcaccc gcagctgctg caccggcacc ccctgcaccc
     5401 gcagccgctg caccggcacc gcctgcgccc gcacccgcag ctactgcacc ggcaccccct
     5461 gcgcccgcag ccactgcacc ggcacccctt gcgcccgccg cacgaccagc cgccacaaaa
     5521 cccacaggcg gcgcgctgcc cggcgtgccg gtgatgcatg aagaggaaga cg
//
LOCUS       DATIML010001175         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1113215, whole genome shotgun sequence.
ACCESSION   DATIML010001175 DATIML010000000
VERSION     DATIML010001175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113215"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /locus_tag="VLJ38_20260"
     CDS             complement(<1..728)
                     /locus_tag="VLJ38_20260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HSU41930.1"
                     /translation="MFATAGCGYSQEEWDAKVRENDSLRDQLTTERQAHKKCEADNSA
                     ANQQIDELKRQLTERGVNLENMTASLAEQKKALDEYARRTEQLDAIRKRFEVLQQKLQ
                     ALTQLGLQVEVRNNKMLIRLPGDVLFDSGSDKLKKEGSDILLKVAEVIRTDADLSKRR
                     FQVAGHTDSKPLAGGPFRDNWGLSAMRARSVTVLLTTPTDKGGGGLPPANWSASGYGD
                     TDPVASNETDDGRQKNRRVELVVQP"
     gene            1084..1218
                     /locus_tag="VLJ38_20265"
     CDS             1084..1218
                     /locus_tag="VLJ38_20265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41931.1"
                     /translation="MGGIKKMAAKKTRSKTARKAPKKAAPKVAKKKGKRRAKRKSKAK
                     "
     gene            complement(1470..>2033)
                     /locus_tag="VLJ38_20270"
     CDS             complement(1470..>2033)
                     /locus_tag="VLJ38_20270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41932.1"
                     /translation="PEPLAQTGSEFRAALGATVGNLRPALQNSILFLGKSLGVSLEQG
                     GVFDDQAARRETSERLRRDVWMFAQIVRAFSSKAQHSPTEDGWAPLHGFQYVREFLAY
                     FRAMGYPLLRAGDYPRIDLFMAAMARLEDTDLVDPARLEDAIDECVAFHGFLTRLFDD
                     ISKRDELSGIAFDRRAAAGVLKLYLGD"
BASE COUNT          361 a          633 c          680 g          359 t
ORIGIN      
        1 ggctgaacga cgagctcgac gcggcggttc ttctggcggc cgtcgtccgt ctcgttgctg
       61 gcgaccggat cggtgtcgcc gtagccggat gcgctccagt tcgcgggcgg caaaccgccg
      121 ccgcccttgt cggtgggcgt cgtgagcagc acggtcacgg agcgggcgcg catggccgag
      181 aggccccagt tgtcgcggaa tggtccgccg gcgagcggct tcgagtcggt gtgaccagcc
      241 acttgaaagc gacgcttcga gagatcggcg tcggtgcgga tgacctcggc gaccttgagc
      301 aagatgtcgc tgccttcctt cttcagcttg tcggacccgg aatcgaagag cacgtcgcct
      361 ggcaggcgaa tgagcatctt gttgttccgc acttcgacct ggagcccgag ttgcgtgagc
      421 gcttgcagct tctgctgcag cacctcgaag cgcttgcgaa tggcgtcgag ctgctcggtg
      481 cgacgcgcgt actcgtcgag tgccttcttt tgctcggcga ggctcgccgt catgttctcg
      541 aggttgacgc cgcgctcggt gagctggcgc ttgagctcgt cgatctgctg gttcgcggcg
      601 gagttgtcgg cctcacactt cttgtgagcc tggcgctcgg tcgtgagctg atcgcggagg
      661 ctgtcgttct cgcggacctt cgcgtcccac tcctcctgcg agtagccgca accggctgtg
      721 gcgaacatga gagctccggc aatccattga gagtagcggc gggcgagcat ggggctgagt
      781 cctcagtttt ttcgtggagg cgagaagcac ctcgacgccc cttagagatc actgcggggc
      841 aacgcgtcaa gtgcgcgttg ccccaaggat ttttagcgtg cgctcggacg gcaacggcgt
      901 cgtgaaacgg ccacacggcc gttactaaac gaacgctctc cacgcaatgt tttcatactc
      961 aaaagcatgg cggacccgca cggccgacgc gtttactgaa gatttttcgt tgacaacccc
     1021 aatacgtggc actatacgtc ttgcaacata ccctaggggc tcggttcaga actgaccccg
     1081 ccaatgggag gcatcaagaa aatggctgca aagaagaccc gctccaagac cgcacgtaag
     1141 gctccgaaga aggctgctcc gaaggttgcc aagaagaagg gcaagcgccg cgcgaagcgc
     1201 aagagcaagg cgaagtgaat cgcctccggc gacgacggct cgtagccgcc actcgctggg
     1261 caaagcgtag agagcccaga ttgggccacc acgctggcgg gctacggccc gtcgccgtgg
     1321 cgccgggcac gttggtcgag tgaacgctcg accgcgtgcc cggcaagaag ctgacgcacg
     1381 tagcgcgttg ctcgtccccg ccgacgagca cgcagacacc tacgtgactc gtgccgcgcc
     1441 ccgtggatga acgaggcagt cgagtggcac tagtcgccga gatagagctt caagacgcca
     1501 gctgcggcgc gtcgatcgaa cgcgatgccc gagagctcgt cgcgcttgga gatgtcgtcg
     1561 aagagccgcg tgaggaagcc gtggaacgcg acgcattcgt cgatggcgtc ctcgagccgc
     1621 gccggatcga ccaagtccgt gtcttcgagg cgagccatcg ccgccatgaa tagatcgatg
     1681 cgcgggtaat cgccggcgcg gagcagcggg taacccatgg cccggaagta cgcgaggaat
     1741 tcgcggacgt attgaaagcc gtggagcggc gcccagccgt cttccgtcgg cgagtgctgc
     1801 gccttgctcg agaacgcacg gacgatttgc gcgaacatcc agacgtcccg ccgtagccgc
     1861 tcgctggttt cgcgccgagc ggcctggtcg tcgaacacgc cgccctgctc gaggctcacg
     1921 ccgagcgact tgccgaggaa tagaatcgag ttttgcagcg ccggccgcag gttgccgacg
     1981 gtcgccccga gcgccgcgcg aaactcgctg ccggtctggg cgagcggctc cgg
//
LOCUS       DATIML010001176         2520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2265726, whole genome shotgun sequence.
ACCESSION   DATIML010001176 DATIML010000000
VERSION     DATIML010001176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2265726"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..1092
                     /locus_tag="VLJ38_20275"
     CDS             85..1092
                     /locus_tag="VLJ38_20275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41933.1"
                     /translation="MTGRVLLALAALVAGCAAGRQIVTPRSEYRLYRETRLAPTVEAR
                     LGAANRYLHLSPSGAYAPELRAWFGNAERAYVASAHDKLPLLLAYAKALPDGPSIGTV
                     NERIEELEAATRFLQERARAHEQRVESLETALARAATQRKAFVTELTAWLGALASVRS
                     YGQPLAALTPDVRERFALTELTAGCPLDVCARSAEPRFAIPNASTQLIPREAAYTVEL
                     VVASGTVAGLRLHGRELFSRVGEALDLRPVSFSDPQSRAEAIGRSLLVIENALGAPLA
                     AGACERPAVSPVVLERNCDGVHVTVTAAIDPGADDVIAFGPETKPPPAPVAPRAKRPK
                     H"
     gene            1110..1991
                     /locus_tag="VLJ38_20280"
     CDS             1110..1991
                     /locus_tag="VLJ38_20280"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HSU41934.1"
                     /translation="MAPSIPYVQIPDLTLVPAHAFGAFPAVPIALKPFGTLVALGLYF
                     GSRAAIHAARRRGLSERALVSFLTWVVLSSFFFGHVLDTLSYYPREALRDPWSLLRLW
                     EGLSSFGGFTGSILGGLAWRFRHRTPVLPYADVVTSCFPVSWTFGRLGCSIAHDHPGV
                     HSELWFAVRYPDGGRLDLGLLELAITVPLMLAFLWLMRRPRPWGFYAGTICAYYAPLR
                     FGLDFLRERSGAVIGGYAAGGDARYFALTPAQWGCVPLFVLGIALLVRARHTGTAPPP
                     VPPRFAVPAANPSGAEH"
     gene            complement(1974..>2520)
                     /locus_tag="VLJ38_20285"
     CDS             complement(1974..>2520)
                     /locus_tag="VLJ38_20285"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41935.1"
                     /translation="GILQAAAEDGRTVTRAFINITSFGLGGLTDRIVNAGPKWLGGKS
                     AFFLGTLRALLAYQNAAVRVKVDGATWLESPIVNVALANGRYFGGGMQIAPDADPTDG
                     LFDVVALGDLTRLQTVGLTQRVYAGTHLGQPAITTTRGALVEAEALAPGTEVLIDMDG
                     ETPGRLPLTARIAHGALMFRT"
BASE COUNT          340 a          890 c          837 g          453 t
ORIGIN      
        1 gggctgcggt gagtatcgcg actacacgac ggaccaaggt cgcgtcttgc cgtcggaatg
       61 ccagttttgc ccggagccat ccccgtgaca ggtcgcgtgc tcttggcgct cgcagcgctc
      121 gtcgccggct gcgccgccgg ccggcaaatc gtcacgcccc gctcggagta ccggctctat
      181 cgcgagactc ggctcgcgcc caccgtcgag gcgcgcctcg gcgccgccaa tcgttacctg
      241 cacctctcgc cgagcggcgc ctacgccccc gagctgcgcg cttggttcgg caacgcggag
      301 cgcgcgtacg tcgcaagcgc tcacgacaaa ctgccgctct tgctggcgta cgccaaggct
      361 ttgcccgatg gaccgagcat cggcacggtg aacgagcgca tcgaagagct cgaagccgcc
      421 acgcgcttcc tgcaagagcg agcgcgcgcg cacgagcagc gcgtcgagtc gctcgaaacc
      481 gcgctcgcgc gcgctgccac gcaaaggaag gcgttcgtca ccgagctcac ggcgtggctc
      541 ggcgcgctcg cgagcgtgcg gagctacggg cagccgctcg ccgcgctaac gcccgacgtg
      601 cgggagcgct tcgccctcac cgagctcacg gcgggctgcc cgctcgacgt ctgcgcgcgg
      661 agtgcggagc cgcggttcgc gattccgaat gcgtcgacac agctcattcc gcgcgaggcg
      721 gcgtatacgg tcgagctcgt cgtcgcgtcg ggtaccgtcg cgggcctgcg tctgcacggt
      781 cgtgagctct tcagtcgcgt cggcgaggcg ctcgatctgc gcccggtctc cttcagcgac
      841 ccccagtcac gcgccgaagc gatcggccgc agcttgctcg tgatcgaaaa cgcgcttggc
      901 gcgccgctcg ccgccggtgc ttgtgagcgg cccgccgtga gccccgtggt gctcgaacgc
      961 aattgcgacg gcgtccacgt gacggtcacc gccgccatcg atcccggcgc cgatgacgtg
     1021 atcgctttcg gtcccgaaac caagccgccg cccgcgcccg tcgcgccgcg agcgaagcga
     1081 ccgaaacact gagctcgctc agcgctccga tggctccgag catcccctac gttcagatcc
     1141 ccgatctcac gctcgtgccc gcgcacgcgt tcggtgcctt tcccgccgtg ccgatcgcgc
     1201 tcaagccatt cggtacgctg gtcgctctcg ggctctactt cggctcgcgg gcggcgattc
     1261 acgccgcgcg taggcggggc ttgagcgaac gagcgctggt ttcttttctg acgtgggtcg
     1321 tactttcgag ctttttcttc gggcacgtgc tcgacacgct ttcgtattac ccgcgcgaag
     1381 cgctgcgcga tccgtggtcg ctcctgcgtt tgtgggaagg tctctcgagc ttcggcggct
     1441 tcacgggcag catcctcggc gggctcgctt ggcgatttcg gcaccggacg ccggtcctcc
     1501 cgtacgccga cgtagtcacg agctgcttcc ccgtgagctg gaccttcggc agactcggct
     1561 gctccatcgc gcacgatcat cccggcgtgc acagcgagct ctggttcgcg gtgcggtacc
     1621 ccgacggagg ccgcctcgac ctcgggctct tggagctcgc gatcaccgtg ccgctcatgc
     1681 tcgcgttcct gtggctcatg cgacgcccgc gaccctgggg tttctatgcg ggcacgatat
     1741 gcgcgtacta cgccccgctc cgttttgggc tcgacttctt gcgcgagcgg tcgggcgcgg
     1801 tcattggcgg ttacgcggcc ggcggagacg cgcgctattt cgcgctcacg ccggcacaat
     1861 ggggttgcgt gccgctcttc gtcctcggta tcgcgctgct cgtccgcgcg cggcacacgg
     1921 ggactgctcc gccacccgtg ccgccccgat tcgccgtgcc ggcggcgaac ccgtcaggtg
     1981 cggaacatta gagcgccgtg ggcgatgcgt gccgtgagcg gtagtcgtcc cggtgtctcg
     2041 ccgtccatgt cgatcaagac ttcggttccg ggggccaatg cctccgcctc gacgagcgcg
     2101 ccgcgcgtgg tcgtgatggc gggctgaccg aggtgcgtcc ctgcgtagac gcgctgcgtg
     2161 agtccgaccg tttgtaaacg tgtgaggtca ccgagggcga cgacgtcgaa caggccgtcc
     2221 gtcggatcag cgtcgggcgc aatttgcatg ccgcccccga aatagcggcc gttcgcgagc
     2281 gcgacgttga cgattgggga ctcgagccag gtcgccccgt ccaccttcac gcgcacagcg
     2341 gcgttttgat acgcgaggag cgctctgagc gtgccgagaa agaaagcaga ttttccgccc
     2401 agccatttgg gcccggcgtt cacgatgcga tcggtgagac ctccgagccc gaagctcgtg
     2461 atgttgatga aggcgcgcgt cacggttcgc ccgtcttccg ccgcggcttg caggataccg
//
LOCUS       DATIML010001177         2194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5160511, whole genome shotgun sequence.
ACCESSION   DATIML010001177 DATIML010000000
VERSION     DATIML010001177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5160511"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VLJ38_20290"
     CDS             <1..646
                     /locus_tag="VLJ38_20290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41936.1"
                     /translation="DRSCLALVETEWVVRATPPSQAGKFLLFEPAQIYDGSAVIAGGG
                     PPAAGATVHAVASSLLTDSNVLNVGDAAVAVVPRATSGLVDTDGSFSLQADAGVFDLR
                     IEPDPSTGFGWLVMPGFELPARGDELNGLQVDLPLVYRGTVTLAASDGPPTPIPKALI
                     RAYAYVKDGKISTKADGAIAVQVAETYSEDQTGDVGAFRLLIPPTLVLPTPPMP"
     gene            770..1621
                     /locus_tag="VLJ38_20295"
     CDS             770..1621
                     /locus_tag="VLJ38_20295"
                     /inference="COORDINATES: protein motif:HMM:NF013899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HSU41937.1"
                     /translation="MALLELRPTKPEPWRARLALRFERRGERTILAAREHLGPLVVQR
                     PFHPEADGTCHVYVLHPPGGIVGGDVLELEVDVQPNAAALLTTPAATKFYRSAGRTAV
                     AHQRLTVRAGGLLEWLPQETIAFGGALVSTVTEVTLEPGARFLGWEITCLGRPASADS
                     FVTGRLDQRLSLSEAGRPLVVDRLLTEGGGSLARGAWGWGGRTVYGCFVASGAPRELT
                     GALRDAVRPDGPGELFAVTEVGGACVCRYLGTSAARAREQLCRAWGVAREVLQQKTAC
                     PPRIWAT"
     gene            1629..1931
                     /gene="ureA"
                     /locus_tag="VLJ38_20300"
     CDS             1629..1931
                     /gene="ureA"
                     /locus_tag="VLJ38_20300"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006811999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HSU41938.1"
                     /translation="MELSPRDKDKLLIFTAALLAERRKARGVKLNYPEAVAYITAAIL
                     EGARDGRTVAELMSYGATLLKREDVMEGVPEMILEVQAEATFPDGTKLVTVHHPIQ"
     gene            1991..>2194
                     /gene="ureB"
                     /locus_tag="VLJ38_20305"
     CDS             1991..>2194
                     /gene="ureB"
                     /locus_tag="VLJ38_20305"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018041073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0035550 - urease complex [Evidence IEA];
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HSU41939.1"
                     /translation="MIPGEIMVLQGEIELNAGRPRLKVSVANTGDRPIQVGSHYHFYE
                     TNRALAFDREPTRGYRLNVAAGTA"
BASE COUNT          325 a          759 c          744 g          366 t
ORIGIN      
        1 cgatcgctcc tgtcttgcgc tcgtcgagac ggagtgggtc gtacgggcga cgccgccctc
       61 gcaagcgggg aagttcctcc tgttcgagcc cgcccaaatc tacgacggca gcgccgtgat
      121 cgcaggtggt ggcccgcccg cggccggcgc gacggtgcac gccgtggcct cttcgctctt
      181 gacggattcg aacgtgctca acgtgggtga cgcggccgtc gcggtcgtgc cacgtgcgac
      241 ttcgggcctc gtcgatacgg acggttcgtt ctcgctccaa gcggacgcgg gcgttttcga
      301 tctgcgcatc gagcccgatc cgagcaccgg tttcggctgg ctcgtgatgc ccggcttcga
      361 gctgcccgcg cgcggtgacg agctcaacgg tctccaggtc gatctgccgc tcgtctaccg
      421 cggcacggtg accctcgccg cgagcgacgg cccccccacg ccgattccga aggcgctgat
      481 ccgcgcctac gcgtacgtga aagacggcaa aatctcgacc aaggccgacg gcgccatcgc
      541 cgttcaagtc gcagagacgt attcggaaga ccagacgggc gacgtcggag cgttccgcct
      601 gctcattccc ccgacgctcg tgctgcccac gccgccgatg ccctgatttc tcgcgcagcg
      661 ccgcctcggt gtccggcgcg tttcgtgccg cttcgccggc agggcggctg cgggccggcg
      721 atgtttcgtc cgttgcttcg caacgcgcct cgtcgtactc gggggcgaga tggctctgct
      781 cgagctccgc cccacgaagc ccgagccctg gcgcgcacgg ctcgcgctcc ggttcgaacg
      841 gcggggcgag cgcacgatct tggcggcgcg cgagcacctg gggcccctcg tcgtgcagcg
      901 gccgtttcat cccgaagccg acggcacctg tcacgtctac gtcctgcatc cgccgggtgg
      961 catcgtcggc ggggacgtgc tcgagctcga ggtcgacgtg cagccgaacg ccgccgcgct
     1021 cctcacgacg ccggccgcga ccaaattcta ccgcagcgcc ggcaggaccg ccgtcgcgca
     1081 ccagcgcttg acggtacgtg cgggcgggct gctcgagtgg ctaccccagg agacgatcgc
     1141 gttcggcggc gcgctcgtgt cgaccgtcac cgaggtcacg ctcgaaccgg gcgcgcgctt
     1201 tctcggttgg gaaatcacct gcctcgggcg gccggcgtca gcagattcgt tcgtgaccgg
     1261 ccgcctcgat cagcgtcttt cactcagcga ggctgggcgt ccgctggtcg tggatcgctt
     1321 gctcaccgag ggcggcggtt cgctcgcgcg tggtgcttgg ggttggggcg ggcgcaccgt
     1381 ctacggctgc ttcgtcgcct cgggcgcgcc gcgcgagctc acgggcgcgc tacgcgacgc
     1441 cgtgcgtccc gacggtccgg gcgagctctt tgccgtgacc gaggtcggcg gcgcgtgcgt
     1501 gtgccgttat ctcggcacga gcgcggcgcg cgccagagag caactctgcc gcgcctgggg
     1561 cgtggcgcga gaggtcttgc agcagaagac ggcctgtccg ccgcgtattt gggccacctg
     1621 aggaagtcat ggagcttagt ccccgcgaca aagacaaatt gttgatcttc accgccgcgc
     1681 tcctggccga acggcgtaag gcgcgcggcg tgaagctcaa ctacccggaa gccgtcgctt
     1741 acatcacggc cgccattctc gaaggcgctc gcgacgggcg caccgtggcc gagctcatga
     1801 gctacggcgc gacgctgctc aagcgcgagg acgtgatgga gggcgtaccc gaaatgatcc
     1861 tcgaagtgca ggccgaagcg acgttccccg acgggaccaa gctcgtcacc gtgcatcacc
     1921 ccattcaatg agtaagtaga cgccagggct tccggcgaga atgcaaacca gttctggaaa
     1981 aggctaagcg atgattcccg gtgaaatcat ggtcctgcag ggagaaatcg agctcaacgc
     2041 ggggcgcccc aggctcaagg tgagcgtcgc gaacacgggc gatcgcccga tccaggtcgg
     2101 ctcgcattat cacttctacg agaccaaccg cgcgctcgcc ttcgaccgcg agcccacgcg
     2161 cggctatcgt ttgaacgtcg cggcgggtac ggcc
//
LOCUS       DATIML010001178         3446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_244467, whole genome shotgun sequence.
ACCESSION   DATIML010001178 DATIML010000000
VERSION     DATIML010001178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244467"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VLJ38_20310"
     CDS             complement(<1..205)
                     /locus_tag="VLJ38_20310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41940.1"
                     /translation="MRSEAELLGLALALGADQVGTLSARERTLLARGAPVPASVVRET
                     RERLHAGEDPLGEALCALRTPAER"
     gene            complement(218..2197)
                     /locus_tag="VLJ38_20315"
     CDS             complement(218..2197)
                     /locus_tag="VLJ38_20315"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSU41941.1"
                     /translation="MLGEPAGLRELSPRARAELGVLDQVAQALETRPLAPGDIVLRPH
                     PLLVLVRRQTLLVLLAPAKVWDHARELFAPWTEQLASAEARLVLLGRPEDADLERALN
                     LGVCALLSREPSREELVVALHQAFELMELKARSESRGKWLNRYRYELGELIEIARALT
                     TDREIDRLLGLILEKARFVTGADAGSLYIVEGNDPSPARRTLRFKLSQNDSLSFDSRE
                     FTMPISARSIAGYVALEQKTLRLDDVYAMPTGSPFGFDRSFDEKVGYRTQSMLVTPLV
                     SSKGEVIGVLQLLNKKREPKLKLLSRDDFGRNVVPFDERSEELVQTVAAQAGIALENA
                     LLYDEIRKIFEGFVKASVDAIEARDPTTSGHSRRVADLTVTLARAVERADSGPYRAVA
                     WTREDLRELEYASLLHDFGKIGVREHVLVKAKKLYPHDIELIRQRFDFVVRTVEADVL
                     GRKLGAAARGASESELAALDQELLERRRELEDAWHVIESANEPTVLAAGDFQRIEELG
                     RQAYTRMNGEVSTLLSAREVQSLSVMRGSLTTEEFDEIRSHVSHTYRFLSQIPWGKTF
                     SRVATIAGSHHERLNGTGYPNRLRAEEIPLQSKLMSISDIFDALTASDRPYKRAVPLD
                     KALHILSLEVKDGHIDGELVRIFGEARVWEPVMGG"
     gene            complement(2200..3177)
                     /locus_tag="VLJ38_20320"
     CDS             complement(2200..3177)
                     /locus_tag="VLJ38_20320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HSU41942.1"
                     /translation="MLLALSGPQSTLLDELSHRSGAAVSLRGNVIHLTGDEGDVHLAY
                     RFLCGAAELAGRGHELGKDDVARALRGLRDDPAANLVDLLEEAILITPRRRAVVPKTR
                     AQSAYVESIRNHDLTFGIGPAGTGKTYLAMAMAAAALMQKRVKRVILARPAVEAGEKL
                     GFLPGDLAEKVNPYLRPLYDALHDMLDFERVEQLRERGQIEVAPLAFMRGRTLNDSFV
                     ILDEAQNATSEQMRMFLTRLGFGSKAVVTGDVTQTDLPHGARSGLKEARDLFTGVEGI
                     AFCAFTDADVVRHPLVQKIVVAYEERDRQRAAERDARREARSEGKPEAE"
BASE COUNT          534 a         1177 c         1173 g          562 t
ORIGIN      
        1 gccgttcggc cggcgtgcgc agcgcgcata gcgcttcgcc cagcggatct tcgcccgcgt
       61 ggagccgctc gcgtgtctcg cgcacgaccg acgccgggac gggcgcccca cgcgcgagca
      121 acgtccgctc ccgcgccgaa agcgtgccga cctggtccgc cccgagcgcg agcgcgagtc
      181 caaggagctc cgcttcgcta cgcacgcgcg agcttcctca cccgcccatg acgggttccc
      241 agacccgcgc ttcgccgaaa atgcgcacga gctcgccgtc gatgtggccg tctttcacct
      301 cgagcgacag gatgtggagc gccttgtcga gcggcacggc gcgcttgtac ggccgatcgc
      361 tggccgtgag cgcatcgaag atgtcgctga tactcatcag cttcgattgc agcgggatct
      421 cctccgcacg gagccgattc ggataaccgg tgccgttcag ccgctcgtgg tgggaaccgg
      481 cgatcgtcgc cacgcgcgag aaggtcttgc cccaggggat ctgcgacagg aaccggtagg
      541 tgtgcgagac atggctgcgg atttcgtcga attcctcggt cgtgagcgag ccgcgcatga
      601 cgctgagcga ctgcacctcg cgcgcggaga gcagcgtcga aacctcgccg ttcatacgcg
      661 tgtacgcctg gcggccgagc tcctcgatgc gctgaaagtc accggcggcg agcacggtcg
      721 gctcgttcgc gctctcgatg acgtgccaag cgtcttcgag ctcgcggcgc cgttccagga
      781 gctcttgatc gagcgcggcg agctcgctct cggatgcgcc gcgcgcggcg gctccgagct
      841 tgcgtcccag cacgtcggcc tcgaccgtgc gcacgacgaa gtcgaaacgc tgccgaatga
      901 gctcgatgtc gtgcgggtag agcttcttcg ctttgacgag cacgtgctcg cgcacgccga
      961 tcttgccgaa gtcgtgcaag agcgacgcgt actcgagctc gcgcaggtcc tcgcgcgtcc
     1021 aggcgacggc gcggtaagga ccgctgtcgg cgcgttcgac ggcgcgcgcc agggtcaccg
     1081 tcagatcggc gacccggcgc gaatggccgc tcgtcgtggg atcgcgcgcc tcgatcgcgt
     1141 cgacggatgc tttcacgaag ccctcgaaaa tcttgcggat ttcgtcgtac agcagcgcgt
     1201 tttcgagcgc gatgccggct tgggccgcga cggtctgcac gagctcctcg ctgcgttcgt
     1261 cgaagggcac gacgttgcgc ccgaaatcat cgcgcgagag caacttgagc ttcggctcgc
     1321 gcttcttgtt caagagctgg agcacgccga tgacttcccc tttgctcgag acgagcggcg
     1381 tcacgagcat gctctgcgtg cgatagccga ccttctcgtc gaacgagcga tcgaagccga
     1441 acggcgaacc cgtgggcatg gcgtagacgt cgtcgaggcg cagcgtcttc tgctcgaggg
     1501 cgacgtagcc ggcgatgctg cgcgcgctga tcggcatcgt gaactcgcgc gagtcgaagg
     1561 agagcgagtc gttttggctc agcttgaagc gcaaggtgcg gcgcgccggc gacgggtcgt
     1621 tgccctcgac gatgtagagg ctgccggcgt cggcgcccgt cacgaagcgc gccttttcga
     1681 ggattaagcc gagcaggcgg tcgatttccc gatcggtcgt gagcgcgcgc gcgatctcga
     1741 tgagctcgcc gagctcgtag cggtagcggt tgagccattt gccgcggctc tcgctgcgcg
     1801 ccttgagctc catcagctcg aacgcttgat gcagcgcgac gacgagctcc tcgcgactgg
     1861 gctctcgcga caagagcgcg cagaccccga ggtttagcgc acgctcgagg tcggcgtcct
     1921 ctggtcgacc gagcaggacg agccgcgcct cggccgacgc gagctgctcg gtccaaggcg
     1981 cgaagagctc gcgcgcgtgg tcccacactt tggccggcgc gagcagcacg agcagggtct
     2041 gtcgccgcac gagcacgagc agtgggtgcg ggcgcagcac gatgtcgccg ggcgcgagcg
     2101 gccgcgtctc gagcgcctgc gcgacctgat cgagcacgcc gagctcggct cgggcgcgcg
     2161 ggctgagctc acggagcccg gccggctcgc ccagcaccgt cactccgcct ccggcttgcc
     2221 ttcgctgcgc gcttcgcggc gggcgtcgcg ttcggcggcc cgctggcgat cgcgctcttc
     2281 gtacgcgacg acgatctttt gcacgagcgg gtgacggacc acgtcggcgt ccgtgaacgc
     2341 acaaaacgcg atgccttcga caccggtgaa gagatcgcgc gcttccttga gcccgctgcg
     2401 cgcgccgtgc ggcaaatccg tctgcgtgac gtcgcccgtg acgacggctt tcgagccgaa
     2461 gccgagccgc gtgaggaaca tccgcatctg ctcgctcgtc gcgttctgcg cctcgtccaa
     2521 aatcacgaac gaatcgttga gcgtgcggcc gcgcatgaac gcgagcggcg cgacttcgat
     2581 ttgcccgcgc tcgcgcagct gctcgacgcg ctcgaagtcg agcatgtcgt ggagcgcgtc
     2641 gtagagcggc cgcaaataag ggttcacctt ctcggccaga tcgcccggca agaacccgag
     2701 cttctcaccg gcctcgacgg cgggtcgcgc caaaatcacg cgttttacgc gcttttgcat
     2761 cagcgccgcc gccgccatcg ccatcgcgag atacgtcttg cccgtgcccg ccggaccgat
     2821 cccgaacgtg agatcgtggt tgcggatgga ctccacgtaa gcgctctgcg cgcgcgtctt
     2881 cggcaccacg gcgcgccggc gcggcgtgat caaaatcgct tcctcgagca gatctacgag
     2941 atttgcggcc gggtcgtcgc gcaagccgcg gagagcgcgc gccacgtcgt ccttaccgag
     3001 ctcgtgaccg cgccccgcga gttcggccgc gccgcacagg aagcggtacg cgaggtgcac
     3061 gtcgccctcg tcaccggtca ggtggatcac gttgccgcgc aagctgacgg cggcgccgct
     3121 gcggtgcgag agctcgtcga gcagcgtcga ttggggcccc gacagggcta ggagcacggc
     3181 cgtgctctcg acttcgaggc tggctgagga aacggcgtcg gcggcagcgc gggtaatggg
     3241 tgaaacctcg cggggacgcg tgccccggag cctcaacctt aatcccgcgc ggagctctcc
     3301 gctaccccgc ccgcccgaat accccgcccg cccgaaacgc tctcaggggg ggccgagggg
     3361 cggtctatac ttccgcggaa accatggccc caacgcagaa gcgacgaacc ctgtggcaga
     3421 gaacgatgct cgggtgcctc gccacg
//
LOCUS       DATIML010001179         6521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1984458, whole genome shotgun sequence.
ACCESSION   DATIML010001179 DATIML010000000
VERSION     DATIML010001179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6521
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1984458"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VLJ38_20325"
     CDS             <1..189
                     /locus_tag="VLJ38_20325"
                     /inference="COORDINATES: protein motif:HMM:NF019140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RuvA C-terminal domain-containing protein"
                     /protein_id="HSU41943.1"
                     /translation="PYGHAPSPAIAELRMRANRALTHLGFRESEAKWALARAPLTADV
                     TLEDLIRQMLRELARERH"
     gene            complement(420..1685)
                     /locus_tag="VLJ38_20330"
     CDS             complement(420..1685)
                     /locus_tag="VLJ38_20330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase family protein"
                     /protein_id="HSU41944.1"
                     /translation="MSRARMPGVARRSELIGAREAAALLEIKAATLYAYVSRGLLASV
                     PGTRGPSRLYARSDVERLKARHLARRGHGAVAAGALRFGEPVLESALTAIDERGPRYR
                     GRVAVELARAGVAFEAVAELLWFGEEVDADAVAARASNSKLGAARLRALGRFVPRGAA
                     PISALSLAVSALALADPLRFDAPLTAEYARARRLIQLLAAAPALAFEPKRLGPALAAQ
                     TVAGALALALGARDTPRTRAALDRALVVIADHELNPSSFAARVAASTGADLYACVGAA
                     LGALSGPEHGGATARVEALVAETQRPGRATLVIEERARRGDALPGFGHPLYPKGDPRA
                     TVLLTHDKPRHAAERTLAALVESMRAAGREPPNVDLGLVATALALGLPAGAAPAIFAV
                     GRAAGWIAHVFEQRGAGFVLRPRARYTGP"
     gene            1755..2873
                     /locus_tag="VLJ38_20335"
     CDS             1755..2873
                     /locus_tag="VLJ38_20335"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HSU41945.1"
                     /translation="MHTAVANTATRAKSSGLEGTVVADSELSEVDGEQGRLILRGFSV
                     EELGLSATLEDAAELLWSGRRPGAADGRMQQAFGAARARAFSLVPLLGPALALPDAMA
                     SLRAAVAHVAEDESELGPALAGAVAVFAAAWARRAEGREPIAPDPSLSHAADYLRMLQ
                     GGKPSAPAERALSSYLVTVADHGMNASTFAARVVASTGSDAVSAIVAGIGALKGPLHG
                     GAPGPVLDMLDAIGAPERAAGWLEAELAAGRRIMGMGHRVYRVRDPRAAVLERAIEEL
                     ERAGATASRRLPLARAVERAAVEVLAARYPERALKTNVEFYTAVLLDALGVDRRSFSA
                     TFAVGRVVGWYAHVEEQRRSGRLIRPASRYVGPGSATQ"
     gene            complement(3047..3814)
                     /locus_tag="VLJ38_20340"
     CDS             complement(3047..3814)
                     /locus_tag="VLJ38_20340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41946.1"
                     /translation="MKSKLGLSRTLWFGALFSVACGGSKAPAEAPTTAQEAPAESTPS
                     AAAPAREAAPKSAASSGLPKACAKKNGACVPPRPFVEKLCAGDYPSVALYLFGNGLPW
                     TRGYLKGRTKAWNASGGASDNTWLEFDEEVLVLAERKADLGGMQVSGGGGASYDALRW
                     DGGCVTLSGDELTLDKPPAPKTSKVEWRFLDDNVQEALRAVPAINDAYLARRKECKGV
                     TSGEVSSKCVKADDKLSAEIVKYLRGGGALPEPTKVP"
     gene            complement(3811..4362)
                     /locus_tag="VLJ38_20345"
     CDS             complement(3811..4362)
                     /locus_tag="VLJ38_20345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41947.1"
                     /translation="MPEPSATPAPAAEAPPASEAQRELKYIQSPDGLRVEILGVKFVP
                     KVEAVRTQLGFVVKVTLSATASESRTLLAPKNGALAFAGSVKRAGQSEPEHFGDEREG
                     DGEEPLPAGTSVKLTREWPGKLKVRPLGNGDSLELDVALWGLGTTTNDRRPVKQFLRI
                     KAKVEKWKGRASVEPPPGMKGKK"
     gene            4595..5389
                     /locus_tag="VLJ38_20350"
     CDS             4595..5389
                     /locus_tag="VLJ38_20350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HSU41948.1"
                     /translation="MAPSRGPNPSERLLADDEPPAFELHRENARSPYVITCDHASRRI
                     PGALGSLGVPEPELERHIAWDIGVAELGRKLADELDAWLILQNYSRLVIDCNRRLERT
                     DSSPSVSENTPIPGNVELSREAAALRAREIFEPYHARIAGELDARAARGAPAVVIFLH
                     TFTPVFRGAERAWHAGVLYHRDARLAAPLLAALRREAGFEIGDNQPYAATALTDYGIV
                     EHAERRGLVHVELEVRQDLVSDAEGQAAWAERLARLIVSSARELGF"
     gene            complement(5345..6010)
                     /locus_tag="VLJ38_20355"
     CDS             complement(5345..6010)
                     /locus_tag="VLJ38_20355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSU41949.1"
                     /translation="MTRVPHRYLREPVPIFFPSSEEMPETRRHLGLRTALFQILELAF
                     ADRATLGSEQFVYWDPTDPRACCAPDVMLRLGEPDELFDSWKTWEWGAPHLAIEIVSE
                     SDHDRGPWQEKLDRYRRMGVQELVRFDADDPATPLRIWDRAEFELVERDRTLSDFMRC
                     RTLDSYFCVQQDEKLGSLLRLARDAEGRDLFPTPAEARRAAEARVRELEAELARRAHD
                     ESR"
     gene            complement(6093..>6521)
                     /locus_tag="VLJ38_20360"
     CDS             complement(6093..>6521)
                     /locus_tag="VLJ38_20360"
                     /inference="COORDINATES: protein motif:HMM:NF024375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSU41950.1"
                     /translation="YAPFFERLSELWDLSESDVRGLLDRTRDKKSWRRAPLLGLELVA
                     VHGGPRIAGAEAYLARFAAGMTFPAHGHDGHENVLILEGSYTDHTGKIFRSGDVHSTD
                     AGGEHSFTIGPDEPCVAAAVHHGIRFRSLGLRVLAKLFGA"
BASE COUNT          974 a         2232 c         2338 g          977 t
ORIGIN      
        1 ccttacggac atgcaccatc gcccgctatc gcggagctac gcatgagggc caatcgcgcc
       61 ctcactcacc tgggcttccg cgagtcggag gcgaaatggg cgctcgcgcg ggctcctctc
      121 actgccgacg tcaccctcga agacctaatc cgccaaatgc tgcgcgagct cgcccgagaa
      181 cggcactaac cctacggctc tcggcggcgc cgctcctggc gggggcagct ctcgagtcgc
      241 ccgatgctgg ttccattctg aatgccgccg cgcgagcgcg gagatccgat gaaccatgag
      301 gtgccggccc cgcaccggct tcgccgggtg cgccccccct cacgcgcttc gcgcgtgcct
      361 agtgcctcct caaacgcgtc gttacctacg cggcgcggta ctagtaccag aacccccgat
      421 cacggacccg tgtaacgagc gcgcggccgc agcacgaagc cggcgccccg ttgctcgaag
      481 acatgggcga tccagccggc ggcgcgcccc actgcgaaaa tcgccggggc cgcgccggcc
      541 ggcagcccga gggcgagcgc ggtcgcgacc aggccgagat cgacgttcgg cggctcgcgc
      601 ccggccgcgc gcatgctttc gacgagcgcc gcgagcgtgc gctctgcagc atggcgcggc
      661 ttgtcgtgcg tgaggagcac ggtcgcgcga gggtcgccct tcgggtagag cggatgaccg
      721 aagccgggga gcgcgtcacc gcggcgagcg cgctcctcga tcacgagcgt cgcgcgcccg
      781 ggtcgctgcg tctccgcgac gagcgcttcg acgcgcgccg ttgcgccacc gtgctccggg
      841 cccgagagcg cgccgagcgc cgcgccgacg caagcgtaaa ggtcggcgcc ggtcgacgcg
      901 gcgacgcgcg cggcaaagct cgagggattg agctcgtgat cggcgatgac gacgagcgcg
      961 cggtcgagcg ccgcgcgcgt gcgcggcgtg tcgcgcgcac cgagcgctag cgcgagcgcg
     1021 ccggcgaccg tctgcgcggc gagcgccggg ccgagccgtt tgggctcgaa cgcgagcgcg
     1081 ggtgcggcgg cgagcagctg aatgagccgg cgggcacgcg cgtactccgc cgtgagcgga
     1141 gcgtcgaaac gcagcggatc cgcgagcgcg agcgccgaga cggccagtga aagcgctgaa
     1201 atgggcgcgg cgccacgcgg cacgaagcgt ccgagcgcac gcagccgcgc cgctccgagc
     1261 ttggaattgc tcgcgcgagc cgcgacggcg tctgcgtcta cctcctcacc gaaccacagg
     1321 agctcggcga cggcctcgaa cgccacgccc gcgcgcgcga gctcgaccgc cacgcgaccg
     1381 cggtaacgcg gcccgcgttc gtcgatcgcc gtgagcgcgg actcgagcac cggctcgccg
     1441 aagcgcagcg cgcctgccgc gacggcgccg tgtccacgcc gcgcgagatg tcgcgccttc
     1501 agacgctcga cgtcgctgcg cgcgtacaga cgactcggtc cacgtgtacc cggcacgctc
     1561 gcgagcaaac cgcggctcac gtaagcgtag agcgtcgcgg ccttgatctc gagcagcgcc
     1621 gcggcttcac gcgcgccgat gagctcgctg cgccgcgcca cacccggcat tcgcgcccga
     1681 gacattgatt gtcgaatcta cattgatcga tgcggatgcg tgtctcaagt tcgaaccgcg
     1741 aggagaacag cacgatgcac accgccgttg cgaataccgc tacacgggca aaatccagtg
     1801 gactcgaagg aacggtcgtc gccgacagcg agctcagcga agtggacggc gagcaggggc
     1861 ggctgatttt gcgggggttc tcggtcgaag agctcggact cagcgcaaca ctcgaagacg
     1921 ccgccgagct cctgtggagc ggacgacgac ctggcgccgc cgacgggcgg atgcagcagg
     1981 cgttcggcgc cgcacgggcg cgggcgtttt cgctcgtgcc gctgctcggc ccggcgctcg
     2041 cgctgcccga cgccatggcg agcctgcggg cggccgtcgc gcacgtggcc gaagacgagt
     2101 cggaattggg cccggcgctc gcaggcgccg tggcggtatt tgcggctgcc tgggcgcggc
     2161 gggccgaagg acgtgaaccc attgcaccgg atccctcgct ctcgcacgcg gccgattacc
     2221 tgcgcatgct gcagggcggt aagccgagcg cgcctgcgga gcgcgcgctt tcgagctacc
     2281 tcgtcacggt cgccgatcac ggcatgaacg cttcgacgtt cgcggcgcgc gtcgtcgcgt
     2341 caaccggatc ggacgccgtt tcggcgatcg tcgcggggat tggtgcgctc aaggggccgc
     2401 ttcacggcgg cgcaccgggg ccggtgctcg acatgctcga cgcaatcggg gcacccgagc
     2461 gcgcggcggg gtggctcgaa gcggagctcg cggcggggcg ccgcatcatg ggcatggggc
     2521 atcgcgtgta ccgcgtgcgg gacccacgcg cggccgtgct cgagcgagcg atcgaagagc
     2581 tcgagcgcgc gggcgcgacg gcgagccggc gcttgccgct cgcgcgtgcc gtcgagcgcg
     2641 cggcggtcga agtgctcgca gcgcgctacc ccgagcgcgc gctcaagacg aacgtcgagt
     2701 tttacacggc cgtgctcctc gacgcgctcg gcgtcgatcg gcgctcgttc tcggcgacgt
     2761 tcgccgtcgg gcgcgtcgtc ggctggtatg cccacgtcga agagcaacgc cgaagtgggc
     2821 ggctgatccg accggcgtcg cgctacgtcg ggccgggcag cgcgacgcag tgacgcgcct
     2881 ggccgttcac gcgctgcaac ggcgcggcac ggcaccgttc acgctgcgcg gtggaacggc
     2941 gcggcacggc gccgttcacg ctgcgcgacc gtgcccgccg caaaatcaaa cgacgaacgc
     3001 cgccgggcgc tgccgcacgg gaacgcggcg cccccgtgac ggcgctttac ggcaccttgg
     3061 tgggctcggg cagcgcgccg ccgccgcgca ggtatttcac gatttcggcg ctcagcttgt
     3121 cgtcggcttt gacgcacttc gagctcactt cgccgctcgt gacgcctttg cattctttgc
     3181 gccgcgcgag gtacgcgtcg ttgatggcgg gcacggcgcg gagcgcctcc tgcacgttgt
     3241 cgtcgaggaa gcgccactcc accttggagg tcttcggagc gggcggcttg tcgagcgtga
     3301 gctcgtcacc cgagagcgtc acgcagccgc cgtcccagcg cagggcgtcg tagctcgcgc
     3361 cgccgccgcc gctcacttgc atgccgccga gatcggcttt gcgctcggcg agcacgagca
     3421 cttcctcgtc gaactcgagc caggtgttgt cggaagcgcc gcccgatgcg ttccacgcct
     3481 tggtgcgacc cttgaggtaa ccacgcgtcc acggcaagcc gttgccgaag aggtagagcg
     3541 cgacggatgg gtaatcgccg gcgcatagct tttcgacgaa gggccgcggc ggcacgcacg
     3601 cgccgttctt cttggcgcag gctttcggta agcccgagct cgcggccgat ttgggggctg
     3661 cttcacgtgc gggggccgcg gcggagggcg tgctttcggc gggcgcttct tgcgcggtgg
     3721 tcggtgcttc agccggcgct ttcgagccgc cgcaagcaac gctgaagagc gccccgaacc
     3781 acagagttcg cgacagtccg agcttcgatt tcacttcttg cctttcatgc cgggcggcgg
     3841 ctcgaccgac gcgcgccctt tccatttttc gactttggct ttgatgcgta gaaattgttt
     3901 gaccggccgg cggtcgttcg tggtcgtgcc taggccccag agcgccacgt cgagctcgag
     3961 cgagtcgccg ttgccgagcg ggcgcacctt cagcttgccg ggccattcgc gcgtgagttt
     4021 gacgctcgtg ccggcgggca ggggttcttc gccgtcgcct tcgcgttcgt caccgaagtg
     4081 ctcgggctcg ctttgcccgg cgcgcttgac gctaccggcg aaggcgagag cgccattttt
     4141 aggtgcgagc aacgtgcggc tttcactggc cgtcgcgctc aaggtcacct tcacgacgaa
     4201 gccgagctgc gtgcgcaccg cttcgacctt ggggacgaac ttgacgccta ggatttcgac
     4261 gcggaggcca tcgggcgatt ggatgtactt gagctcgcgc tgggcctcgc tcgcaggcgg
     4321 agcttcggcg gcgggagctg gcgtcgcgct cggttcaggc acggcggcgc tcggggcagt
     4381 cgtcggagcg acaggcgccg gaggggcagg cggctgggcg gcggaggcag ccgcgggtga
     4441 cggcgtgggg gcgctcggcg ccgcagtttg ttgggctccg ccgccgcacg ccgagaggag
     4501 gaggggcacg gccgcgagcc cgcgggcgag ccttgaaaca cggtgagccg acatgcgggc
     4561 acggtatcac gacgcgaacg gcttagaatg cgtcgtggca ccgagccgag gaccgaaccc
     4621 gagcgagcgg ttgctcgccg acgacgagcc ccccgcgttc gagctgcacc gggagaacgc
     4681 gcgctcgccg tacgtgatca cgtgcgacca cgcgtcgcgc cgcattcccg gcgcgctcgg
     4741 gtcgcttggc gtgccggagc cggagctcga gcggcacatc gcgtgggaca tcggcgttgc
     4801 agagctcggg cgcaagctcg ccgacgagct cgacgcctgg ctgattcttc aaaactattc
     4861 gcgcctggtc atcgattgca atcggcggct cgagcgcacc gactcgagcc cgagcgtgag
     4921 tgagaacaca ccgattccag gcaacgtcga gctgtcgcgc gaggcggcgg cgctgcgcgc
     4981 gcgcgagatt ttcgagccgt atcacgcgcg tattgcgggg gagctcgatg ctcgcgcggc
     5041 gcggggcgcg cccgcggtcg tgatcttctt gcacacgttc acgccggtct ttcgcggcgc
     5101 ggagcgcgcg tggcacgccg gtgttctcta ccaccgtgac gcgcggctcg cagcgccctt
     5161 actcgcggcg ctgcggcgtg aagccggctt cgaaatcggc gacaatcagc cctacgcagc
     5221 cacggcactc accgattacg gcatcgtcga gcacgccgaa cggcgtgggc tcgtgcacgt
     5281 cgagctcgag gtgcgtcagg atctcgtgag cgacgccgag ggccaggcgg cgtgggccga
     5341 acgcttagcg cgactcatcg tgagctcggc gcgcgagctc ggcttctagc tcgcgcacgc
     5401 gggcctcggc ggcgcggcgg gcctccgccg gcgtcgggaa gaggtcccga ccttccgcgt
     5461 cacgcgcgag gcgcaacagc gagccgagct tttcgtcttg ctgtacgcag aagtagctgt
     5521 cgagcgtgcg acagcgcatg aaatcggaca gcgtgcggtc gcgctccacg agctcgaact
     5581 ccgcgcgatc ccaaatgcgg agcggcgtcg cggggtcgtc ggcatcgaag cgcacgagct
     5641 cttgaacacc catgcggcga tagcggtcga gtttctcttg ccaagggccg cggtcgtggt
     5701 cactttcgct cacgatctcg atcgcgaggt gcggcgcgcc ccattcccac gtcttccagc
     5761 tgtcgaacag ctcgtccggc tcgcccagcc ggagcatcac gtccggcgcg cagcacgcac
     5821 gcggatcagt cggatcccag taaacgaact gctcggagcc gagggtcgcg cggtcggcga
     5881 aggcaagctc caaaatttgg aacagcgccg tgcggaggcc gagatgtcgg cgtgtctccg
     5941 gcatctcttc actcgaaggg aagaagatgg gcaccggctc gcgcaagtag cgatgcggaa
     6001 cacgggtcac gacgtgccga accacgaacg aactgtacca cgcccccacg ttcggtcgca
     6061 cgcagccgga gttgcggacg cctgcgctga tttcaggcgc cgaagagctt cgcgagcacg
     6121 cgcaggccga gggaacggaa gcggatgccg tggtgcaccg cggcggcgac gcacggctcg
     6181 tcgggaccga tcgtgaagga gtgctcgccg cccgcgtccg tcgaatgcac gtcgcccgag
     6241 cggaagattt tgccggtgtg atcggtgtag ctaccttcga ggatgagcac gttttcgtgg
     6301 ccgtcgtggc cgtgcgcggg gaaggtcatg cccgccgcga agcgcgcgag atacgcttcg
     6361 gcgccggcga tacgcggacc gccatgcacg gcgacgagct cgagtccgag cagcggcgcc
     6421 ctgcgccagc tcttcttgtc gcgcgtccga tcgagcaaac cgcgcacgtc gctctccgat
     6481 aggtcccaga gctcggacaa acgctcgaag aagggcgcgt a
//
LOCUS       DATIML010001180         3300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3422239, whole genome shotgun sequence.
ACCESSION   DATIML010001180 DATIML010000000
VERSION     DATIML010001180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3300
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3422239"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2919
                     /locus_tag="VLJ38_20365"
     CDS             <1..2919
                     /locus_tag="VLJ38_20365"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU41951.1"
                     /translation="LVLDPKSRPSGEEVLRRIGESSSGGVLSSMPATSGRALVGRKSE
                     LSELEGALQASLRGQPSVVLIEGPSGIGKTSLVRHYLRQLETRRTFVLAGACRERESM
                     SYKAVDGLVDGIVGLLDALPRAEAESLLPSGIAELTVLFPALRAAQAVASVAEVPPNG
                     VDQGQLRLRAIAAFRELLARLRKLRPLILVIDDLQWSDAESALLLGPIFAASDPVPVL
                     FIGTSRGNPDEPGPLLTALRAERGVALPEPVAVRLGPLADADAESLARQILARAPDGS
                     TDAARAIGREAGGHPLFIAELAHAATDSETGAEHAPRSFAELIAHRLAALPSDALALV
                     GIVAVGGTPLPRRILRLALGLSATATEQAIDVLKASRLARSSGLRDDHLVESHHDRVR
                     EIVVQTLEEPVRRRCHLSLARALETWREGKPELVALHYEAGGELESAGRHWLVAADQA
                     ARALAFNHAAELYARGMRQASLTSIELRALEVRRAEALGHAGNGPAAAQAYLAAAATA
                     APGEALDLQRRAAEQLLLSGHVDRGLAVMQEVLGAVGIHKRLTGPPSLASVLVGRFRL
                     KLRGFSHTRRLESEISHEDLARIDACWTLACSLGVIDPIRGADFQATHLRLALGAGEP
                     WRTLRALTLEASYTSSAGIGAERHTARVLELADELARGATDPLAQALLRVVHGVAAYL
                     EGRLETALTELGGALELLTHKCPGAVWETVTAQRFTIASLFWLGRFKRLREVVPPLLA
                     QADGTGNLYATMCFRTAYSWAAWLASGDVGEALEQTRLASSEWRSKGYQLSHCNILIA
                     RSYIDLYAGENERAYARLLEEWPRLRESNYLRIGVLRAQLGKLRAVAALTTADALQAR
                     GEASRASELRHDARAQAKRLRAQPFGRSQAFAALVEAALARSAGDTAHARRDLERAMS
                     LFEEHQMSLFAAAARGHLGTLVGGSEGAENVERARAAFEAERVVEPNKMMRMLVPGFS
                     "
     gene            3088..>3300
                     /locus_tag="VLJ38_20370"
     CDS             3088..>3300
                     /locus_tag="VLJ38_20370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41952.1"
                     /translation="MDGSSNPAEKPLAFVPCLHLHTERMWVSSGEGLFDEGREELVPV
                     ITLWFDYGGTKVRAADRRTRFFVAEGD"
BASE COUNT          464 a         1162 c         1162 g          512 t
ORIGIN      
        1 ctcgtgctcg atccgaagtc gcggccgtcg ggcgaggaag tgctccggcg catcggtgaa
       61 tcgagctcgg gcggtgtttt gtcgagcatg ccggcgacga gcggtcgcgc gctcgtcggg
      121 cgcaaatcgg agctcagcga gctcgagggg gcgctgcaag cgtcgctgcg cggccaaccc
      181 agcgtggtgc tgatcgaggg cccgtcgggt atcggcaaga cgtcactcgt acgccactac
      241 ctccggcagc tcgagacgcg gcgcacgttc gtgctcgcgg gcgcgtgccg cgagcgcgag
      301 tcgatgagct acaaggcggt cgacggcttg gtcgacggta tcgtcgggct gctcgacgcg
      361 ttgccgcgcg ccgaagcgga gtcgctctta ccgtccggca tcgcggagct cacggtgctc
      421 tttccggcgc tgcgcgccgc ccaagccgta gcgagcgtcg ctgaagtgcc gccgaacggc
      481 gtcgaccaag ggcagctgcg cctgcgcgcc atcgcggcct ttcgtgagct cctggcgcgg
      541 ctcaggaagc tccgtccgct gatcctggtc atcgacgact tgcaatggag tgacgcggag
      601 agcgcgctgc tcttgggccc catatttgct gcgagcgatc ccgtgccggt gttgttcatc
      661 ggcacttcgc gcgggaatcc ggacgagccg gggccgctgc tcacggcgct ccgcgccgaa
      721 cggggcgtgg cgctgccgga gcccgtcgcc gtgcgcctcg gcccgctcgc ggacgcggac
      781 gccgagtcac tcgcgcgtca gattttggcg cgcgcgccgg acggctcgac ggacgccgcc
      841 cgcgccatcg ggcgcgaggc agggggccat ccgctcttca tcgccgagct cgcgcacgcg
      901 gccacggaca gcgaaaccgg ggccgagcat gctccgcgga gttttgccga gctcatcgcg
      961 caccggctcg ccgcgctgcc gagtgatgcg ctcgcgctcg tgggcatcgt cgccgtgggc
     1021 ggcacgcctt tgccgcgccg gatcctgcga ctggcgctcg gcctcagtgc gaccgcgacc
     1081 gagcaagcca tcgacgtgct gaaggccagc cggctggcgc ggagctccgg gctgcgcgac
     1141 gaccacctgg tcgagagcca ccacgatcgc gtgcgggaaa tcgtcgtgca gacgctggag
     1201 gagccagttc ggcgtcgctg ccacctgagt ctcgctcgcg cgctcgagac ttggcgcgaa
     1261 ggcaagcccg agctcgtcgc gctccattac gaagcggggg gcgagctcga gagcgccggc
     1321 cgtcactggc tcgtcgcggc cgatcaagcg gcgcgcgcgc tcgcgttcaa ccacgccgcc
     1381 gaactctacg cccgcggcat gcgccaagcc tcgctcacga gcatcgagct tcgcgcgctc
     1441 gaggttcggc gcgccgaagc cctcggccac gcgggcaatg ggccggccgc cgcgcaggcc
     1501 tacctcgccg ccgccgcgac ggccgccccc ggcgaggcgc tcgacctgca gcgacgcgct
     1561 gccgaacaac tgctgctctc gggccatgtc gaccgcggcc tcgcggtgat gcaggaggtg
     1621 ctcggtgcgg tgggcatcca caagcgcctc acgggaccgc cgtcgctcgc ctcggtgctc
     1681 gtcgggcgct tccgtttgaa gctccgcggc ttcagccaca cgcgcaggtt ggagagcgaa
     1741 atttcgcacg aagatctcgc ccgcatcgac gcctgctgga cgcttgcctg ctcgctcggc
     1801 gtgatcgatc ccattcgcgg cgccgatttt caggcgacgc acctcaggct cgcgctcggc
     1861 gcgggcgagc cgtggcgcac cttgcgcgcg ctcaccctcg aagcgtcgta cacctcgagt
     1921 gcgggcatcg gcgccgagcg ccatacggcg cgcgtgctcg agctagccga cgagcttgcg
     1981 cggggcgcga ccgacccgct cgcgcaagcg cttctccgcg tggtccacgg cgtcgccgct
     2041 tacctcgagg gtcgcctcga aacggcgctc accgagctcg gcggcgcgct cgagctcttg
     2101 acgcacaagt gtcccggcgc cgtctgggag accgtcacgg cgcagcgctt cacgatcgct
     2161 tcgctctttt ggctcggccg tttcaagcgg ctccgcgaag tcgtgccgcc gttgctcgcg
     2221 caggcggacg gcaccggcaa tctgtacgcc acgatgtgct ttcgcaccgc gtacagctgg
     2281 gccgcgtggc tcgcgagcgg cgacgtcggc gaggcgctcg aacagacgcg actcgcgagc
     2341 agtgagtggc ggtcgaaggg ctaccagctg tcccactgca acattctgat cgcgcgctcg
     2401 tacatcgacc tttacgcggg ggagaacgaa cgggcctacg cgcgcttgct cgaggagtgg
     2461 ccgcgcctgc gcgagtcgaa ctacctgcgc atcggcgtcc tgcgcgcgca actcgggaag
     2521 cttcgcgccg tggccgctct cacgacggcg gacgcgctgc aagcgcgcgg cgaagcatcg
     2581 cgcgcgagcg agctccgtca cgacgcccgc gctcaagcca agcgtctgcg cgcccagccg
     2641 ttcggccgct cgcaagcctt cgccgcgctg gtcgaggcgg cgctcgcgcg ctccgccggc
     2701 gacaccgctc acgcgcgccg cgacctcgag cgcgccatgt cgctgttcga ggaacaccag
     2761 atgtcgctgt tcgcggctgc ggcacgcggt cacctcggca cgctcgtcgg cggtagcgag
     2821 ggcgccgaga acgtggagcg cgcgcgcgcc gcgttcgaag cggaacgcgt ggtcgaaccg
     2881 aacaagatga tgcgcatgct cgtgcccggc ttcagttgag accgcgacga gaggcttccg
     2941 tagcgccaaa ttcgcctgca tcgcattctg agtgagccga tggaccccaa tggattgggg
     3001 tccatgacgt gcggtgtcgg aggggcaggg ctccctggcg aaaggatgga caaggctatt
     3061 ttttcgcgga aactctagcg cctcatcttg gacggctcgt cgaaccccgc ggaaaaaccg
     3121 ctcgccttcg tgccctgttt gcacctgcac accgagcgga tgtgggtgag ctcgggcgag
     3181 gggctcttcg acgagggacg cgaggagctc gttcccgtca tcacgctctg gttcgattac
     3241 ggcgggacca aggtgcgcgc cgcggaccgg cgcacgcgct ttttcgtggc cgagggcgac
//
LOCUS       DATIML010001181         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2266538, whole genome shotgun sequence.
ACCESSION   DATIML010001181 DATIML010000000
VERSION     DATIML010001181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2266538"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VLJ38_20375"
     CDS             <1..991
                     /locus_tag="VLJ38_20375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41953.1"
                     /translation="SDIATFFIKHLKEPPPSLRSRDPSVPEELDRLLLDLMAKEAKDR
                     PVDAHRVHADLLRITGALGVRVPIEITDADESSRGRARTLPPVAIDQWVKRTAVFEQM
                     LARAFGEQRPQDLVDKLGAVKTLVRKIGELRGRAVDEQRSLESIEARGRETRQRFGHA
                     VDALGIDLSKARDEAKAAGQHAAALATSLDEYKTRLLAAHREVVRWEGRSAFLEPYTD
                     LAVAYRAAADVIDAWAAAKVHVVAAEAAVQKRKSEVSDLEYQIEELRAALRKHEESLE
                     KETAARERLVGEHGKAADDLETKLLEVATGFCAPLRRRPELEPLFQKLEADAA"
     gene            complement(1003..>2607)
                     /locus_tag="VLJ38_20380"
     CDS             complement(1003..>2607)
                     /locus_tag="VLJ38_20380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41954.1"
                     /translation="DIGGIHTQLDGRVVLGDDGADGTQTESNCSINGSDNIATATLTA
                     CALTGNEATDGTDKRFGLTKGGVYEIVVFQAERHPTASNYQLTLDGFLAPRSFCQTDC
                     GDGIKAGSEQCDKGRNMPASGYGVCLNTCTIQFCGDGTVNGSEQCDNRTNATLYGTSG
                     CAPGCLLPAKCGDGVLQAGFNEECDKGTTNNTGAYGGCTASCKLGPYCGDGSVNGTEQ
                     CDTPGAFTTYGSSSGQCNYDCKFAPYCGNGVREGAELCDGSTGCNAQCEFAEFCGDGL
                     KEGDEQCDYGQFGFDGSPKDAPYGGCTTACELGPYCGDAKVQASDGEECDKGSKNSDD
                     TYGGCTTACLLGPHCGDGVLQKGAGESCDNGFNEDEYAYPGDMNACGSDCKAVPYCGD
                     GKIQSTFELCDDGKDNADDAYNGCTTTCEWGPYCGDSIKNGSEACDDGPNNKAYSADG
                     SGCSYECTKNLPYCGDGVRNGPEQCDAGTAKNTGAYGGCNADCTNAAYCGDKIVQKSE
                     HEQCDDGPTGSLKCTPTCKLRNEVPR"
BASE COUNT          383 a          865 c          882 g          477 t
ORIGIN      
        1 gtcggacatc gcaactttct tcatcaaaca cctgaaggag ccgccgccga gtttgcgcag
       61 tcgcgacccg tcggttccgg aagagctcga ccggctcctg ctcgatctga tggcgaaaga
      121 ggccaaggat cgcccggtcg atgcgcaccg cgtgcacgcc gatctcttgc gcatcacggg
      181 tgcgctcggc gtgcgtgtgc ctatcgagat caccgacgcg gacgagagct cgcgcggtcg
      241 ggcgcgcacg ctgccgcccg tcgccatcga ccagtgggtc aagcgcacgg cggtgttcga
      301 gcagatgctc gcgcgcgcgt tcggcgagca gcggccgcaa gatttggtgg acaagctcgg
      361 ggccgtgaag acgctcgtgc gaaaaatcgg cgagctccgc ggtcgtgccg tcgacgagca
      421 gcgctcgctc gaatcgatcg aagcgcgcgg gcgcgagacc cggcagcgct tcggtcacgc
      481 ggtggacgcg ctcggcatcg acctcagcaa ggcgcgcgac gaggccaagg cagcgggcca
      541 gcacgccgca gcgctcgcga cgagcctcga tgaatacaag acgcgcctgc tcgccgcgca
      601 tcgcgaggtc gtgcgctggg aagggcgctc ggccttcctc gagccgtaca ccgatctcgc
      661 ggtcgcttac cgggccgccg ccgacgtgat cgacgcctgg gcggccgcca aggtccacgt
      721 cgtcgccgcc gaagccgccg tgcagaagcg caagagtgaa gtctccgatc tcgagtacca
      781 gatcgaggag ctccgcgcgg ccctccgcaa gcacgaggag agcctcgaaa aggagacggc
      841 ggcgcgcgag agactcgtgg gcgagcacgg caaggccgcc gacgacctcg agacgaagct
      901 gctcgaggtc gccacgggtt tctgcgcgcc gctccggcgc cgtcccgagc tagagccgct
      961 gtttcagaag ctcgaagcgg acgccgcgta gcgcaagtcc gctcacctcg gcacttcgtt
     1021 gcggagcttg cacgtcggcg tgcacttcag gctgccggtc gggccgtcgt cgcactgctc
     1081 gtgctccgat ttctggacga tcttgtcgcc gcaataggcg gcgttggtgc agtcggcgtt
     1141 gcagccgccg taggcacccg tgttcttggc cgtgccggcg tcgcattgtt cgggaccgtt
     1201 gcgcacgccg tcgccgcagt acggcaggtt cttcgtgcac tcgtagctgc aaccgctacc
     1261 gtcggccgag taggccttgt tgttcgggcc gtcgtcgcag gcttccgagc cgttcttgat
     1321 cgagtcaccg caataagggc cccactcgca ggtcgtggtg cagccgttgt aagcgtcgtc
     1381 ggcgttgtcc ttgccgtcgt cgcagagctc gaacgtgctc tggattttgc cgtcgccgca
     1441 gtagggcacc gctttgcaat cggagccgca ggcgttcatg tcgccgggat acgcgtactc
     1501 atcctcgttg aagccgttgt cgcagctctc gcccgcgcct ttttggagga cgccgtcacc
     1561 gcaatgcggt ccgagtaagc acgcagtcgt gcagccgccg taggtgtcgt ccgagttctt
     1621 cgagcccttg tcgcattctt cgccgtcgct cgcctgcacc ttggcgtcgc cgcagtacgg
     1681 cccgagctcg cacgcggtcg tgcagccgcc gtagggcgcg tccttcggtg agccgtcgaa
     1741 gccgaattgg ccgtagtcgc actgctcgtc gccctccttc aggccatcac cgcagaactc
     1801 ggcgaattcg cattgagcgt tgcagcccgt gctgccgtcg cagagctcgg cgccctcacg
     1861 cacgccgttg ccgcagtagg gcgcgaattt gcagtcgtag ttgcattggc cggagctcga
     1921 gccgtacgtg gtgaacgcgc cgggcgtgtc gcattgctcc gtgccgttca cgctgccgtc
     1981 gccgcaatag ggaccgagtt tgcagctcgc ggtgcagccg ccataggcgc cggtgttgtt
     2041 ggttgtgccc ttgtcgcact cctcgttgaa gccggcctgc agcacgccgt cgccgcactt
     2101 ggcgggcagc aggcagccgg gcgcgcagcc gctcgtgccg tagagcgttg cgttggtgcg
     2161 gttgtcgcac tgctcgctgc cgttgacggt gccgtcaccg cagaactgaa tcgtgcaggt
     2221 gttcaggcac acgccgtaac ccgaggccgg catgttgcga cccttgtcgc actgctccga
     2281 gcctgccttg ataccgtcgc cgcaatcggt ttggcagaac gagcggggtg cgaggaagcc
     2341 gtcgagcgtc agttgataat tcgacgcagt cggatggcgc tcggcttgga agacgacgat
     2401 ttcgtagacg ccgcccttcg tcaggccgaa gcgcttgtcg gtcccgtccg tcgcctcgtt
     2461 gcccgtgagg gcgcaagccg tgagcgtggc ggtcgcgatg ttgtccgaac cgttgatcga
     2521 gcagttgctc tcggtctgcg ttccgtccgc gccgtcgtcg ccgagcacga cgcgaccgtc
     2581 cagctgggtg tggatgccgc cgatgtc
//
LOCUS       DATIML010001182         1754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3712857, whole genome shotgun sequence.
ACCESSION   DATIML010001182 DATIML010000000
VERSION     DATIML010001182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3712857"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1185
                     /locus_tag="VLJ38_20385"
     CDS             <1..1185
                     /locus_tag="VLJ38_20385"
                     /inference="COORDINATES: protein motif:HMM:NF001813.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HSU41955.1"
                     /translation="TNATWLADALTGAGFDVVALDTVGDDEARLAAALTRLAAEHDLI
                     VCTGGLGPTTDDLTSATVAKLLGVPLERDAASVEAIRTRMERFGRKLTDSNAKQADFP
                     RGATVLPNAWGTAPGFAVKLGRALACFLPGVPSEMEAIFAAHVAPLLEPLPHVARHQV
                     RLRTFGMAESEVNDRLAGIEAAHGVVLGYRASLPEIEVKVLAEGSSKSDAERRAVAAA
                     AEVRARLGSVVYGEGTLTLPAVLLALLREQSLTLAIAESCTGGLAAELVTNVPGASRV
                     FLGGAVVYQNEVKTELLGVDARLIAEHGAVSREVALAMAEGVRTRCKASIGLAFTGIA
                     GPDGGTKDKPVGLVHLAIARAEGSRHLERVFPGTREQVRRRAVFAGFALIRRELLGEP
                     LP"
     gene            complement(1204..>1754)
                     /locus_tag="VLJ38_20390"
     CDS             complement(1204..>1754)
                     /locus_tag="VLJ38_20390"
                     /inference="COORDINATES: protein motif:HMM:NF014165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41956.1"
                     /translation="FPESARRSPAAFEAANLHALQTRVRPSFIRVDADEVTYPCHIIL
                     RFEIESALVRGELDVKDIPDVWDERMTRLLGLSTRGNFKDGCMQDVHWPAGLVGYFPT
                     YTLGALLAAQLFESAARDIPELSGALARGELVALDAWLREKIWGQASYFETEALVQHA
                     TGRPLDTAAFERHLERRYLGVT"
BASE COUNT          266 a          590 c          631 g          267 t
ORIGIN      
        1 accaacgcga cctggctcgc cgacgcgctc acgggcgccg gtttcgacgt cgtggcgctc
       61 gacacggtcg gcgatgacga ggcgcgcctc gccgcagcgc tcacgcgcct tgccgccgag
      121 cacgacctca tcgtctgcac cggcggtctc ggaccgacca cggacgatct cacgagcgcc
      181 accgtggcga agctcctcgg cgtgccgctc gaacgcgacg ccgcgtcggt cgaagccatc
      241 cgcacgcgca tggagcgctt cgggcgcaag ctgacggact cgaacgcaaa acaagcggat
      301 ttcccgcgcg gcgcgacggt tctgccgaac gcctggggca cggctccggg cttcgccgtg
      361 aagctcgggc gcgcgctcgc gtgctttttg cccggggtgc cgagtgaaat ggaggcgatc
      421 ttcgcagcgc acgtcgcgcc gctgctcgag ccgctgccgc acgtcgcacg ccatcaagtg
      481 cgcctgcgca ccttcggcat ggccgagtcc gaggtgaacg atcggctggc gggcatcgaa
      541 gcggcgcacg gcgtcgtgct cgggtatcgc gcgagcttgc ccgagatcga ggtgaaggtg
      601 ctcgccgaag gctcgtccaa gagcgacgcc gagcggcgcg ccgtggccgc agccgccgaa
      661 gtgcgagcgc gcctcggcag cgtggtgtac ggcgagggca cgctgacgct gccggccgtt
      721 ttactcgctc ttttgcggga acagagcctc accctcgcga tcgccgaatc gtgcacgggc
      781 gggctcgccg cggagctcgt gacgaacgtg ccgggggcga gccgcgtgtt cttgggtggg
      841 gcggtcgtct atcagaacga agtgaaaacg gagctgctcg gcgtggacgc gcggctcatc
      901 gccgagcacg gggccgtcag tcgcgaggtc gcgctcgcca tggccgaggg cgtgcgcacc
      961 cgctgcaagg caagcatcgg cttggcgttc acgggcatcg caggtcccga cggcgggacg
     1021 aaggacaagc ccgtcggtct cgtacacctc gcgatcgcgc gcgccgaggg cagccgtcac
     1081 ctcgagcggg tttttccggg gacgcgtgag caggtgcgcc gccgggcggt gtttgcgggc
     1141 tttgcgttga tccgtcgcga gctcttgggc gagccactgc cgtgagcagt cgcgtccccg
     1201 agctcacgtc acgccgagat accgccgctc gaggtgccgc tcgaacgctg ccgtgtcgag
     1261 cggacgtccg gtagcgtgct gcacgagcgc ttccgtctca aagtacgaag cctggcccca
     1321 gatcttttcg cgtagccacg cgtcgagcgc gacgagctca ccgcgggcga gcgcgccgga
     1381 gagctcgggg atatcgcgcg ctgcgctctc gaacagctgc gcggcgagca gcgcgccgag
     1441 cgtgtacgtc gggaaatagc cgacgagccc ggcgggccag tgcacgtcct gcatgcaacc
     1501 gtccttgaag ttgccgcggg tcgacaggcc gagcaggcgc gtcatgcgct cgtcccacac
     1561 gtcgggaatg tcttttacgt cgagctcgcc gcgcacgagc gcgctctcga tttcgaagcg
     1621 caggatgatg tggcacgggt aagtcacttc gtcggcgtcg acgcggatga agctcggacg
     1681 cacgcgtgtc tgcaaggcgt gcaaattcgc cgcctcgaaa gcagcgggcg agcgccgcgc
     1741 gctctcggga aatg
//
LOCUS       DATIML010001183         4728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5736110, whole genome shotgun sequence.
ACCESSION   DATIML010001183 DATIML010000000
VERSION     DATIML010001183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4728
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5736110"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..755)
                     /locus_tag="VLJ38_20395"
     CDS             complement(138..755)
                     /locus_tag="VLJ38_20395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41957.1"
                     /translation="MSFFRGPWTRRKLVWSLLGLLAGLGVLSVVGAHLLYPSDRTPEG
                     AYYRVVIAVNRGEPAQFFAYLETTAEHACYTIRDYRRRARERVLAAYPEPQRGELSRE
                     HVEEATAADGADVFALYARRLGFMARLRKDLSGVARVEQHGERATVETARGTRYPFRR
                     RPENGIWGLTLFTAVLEAEAERAARDYALIDKAAKDYERARAAGD"
     gene            complement(877..1482)
                     /locus_tag="VLJ38_20400"
     CDS             complement(877..1482)
                     /locus_tag="VLJ38_20400"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSU41958.1"
                     /translation="MAESRNITTQGQGGSPQGQGGTPQTQRGTPQVRTGELQRGGSWS
                     PFSLMSRMMSDMDRFFDDFGLGRSLWSRGGERSGTSTGIDFVPRMDVFERDGKLTVHA
                     DLPGMRQEDVKVNVEDGVLTIAGERSHEHEHEKGGVYRCEREYGSFRRSIALPEGVSP
                     DSIQASFDQGVLEVTMPVPENKQEQKGRAIPINTKQTETRH"
     gene            1727..2443
                     /locus_tag="VLJ38_20405"
     CDS             1727..2443
                     /locus_tag="VLJ38_20405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU41959.1"
                     /translation="MFADARIAVVVPAYREERLIARMLVRIPAYVDAIYVVDDASPDA
                     TLKAATGVADPRIKVVRHTENRGVGAAIVSGYRAALADGHDVLGVMAGDDQMHPDDLE
                     PLLSAVLAGADYAKGNRFVHAEARKMPLARRVGGHFLSLLTRRASGLPVSDTQCGFTA
                     LSARAARALPLDELWPRYGYPNDLLLLLAAQRFRVAEVPVRPVYADEKSGLRPWHVVK
                     IVGVIARRYVRVARSTSASA"
     gene            complement(2404..3702)
                     /gene="purB"
                     /locus_tag="VLJ38_20410"
     CDS             complement(2404..3702)
                     /gene="purB"
                     /locus_tag="VLJ38_20410"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HSU41960.1"
                     /translation="MIPRYTPKDFAELWSDKTRYQTWLDVELAACEALESAGHVPRGT
                     AAAIRAKNLVLDPAAIDRIEQKTRHDVIAFLTHVEELAGDPARWLHRGMTSSDVLDTS
                     LACLLVRATDLLLARTDTLAEKLAQRAREHARTPMIGRSHGIHAEPTTFGVALAGHLA
                     EIRRGRARLARAREEIAVGKIAGAVGTYAHLSPEIEAEALRKLGLAAETVSTQVVARD
                     RHAAFFAALALLAAGIERLATNVRHWQRTEVGEAEERFSAGQKGSSAMPHKRNPVLSE
                     NLCGLARVVRAAVTPALENVALWHERDISHSSVERMLAPDATATLGFMLERAAGLVEG
                     LVVYPERLDQNLARSGGLFFSEAVMLALVEKGLARQAAYEIVQRSAMGAFRGEGEFRA
                     LLGADSDITSRLTPSELDGCFDLEHALRYAEALVERATRT"
     gene            complement(3724..>4728)
                     /locus_tag="VLJ38_20415"
     CDS             complement(3724..>4728)
                     /locus_tag="VLJ38_20415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41961.1"
                     /translation="SGGRLRDIEVAWDNLFEGRSARARLPDAGLYTPGDYERAGGGVQ
                     SARPDLVSIAERGIYVRVHARTRADQPTYFLDGTSVVPVVAINWPSALPRAARAEMAH
                     LGSEHVGLMLLARGGALARARMTNGAWAFDAASVGLPDPEAFGVAQLINITYFKGEAA
                     LHVEKLDERGRRAEARLFPLNAQGPVAGSPIAVPTELDLPATPAACTPAERTTTARLV
                     ARGYPGAHHPVLVTDAVEPPRAMLTGDAVLHGTKVAPCAAAFELHSAPGGAPDPAAPE
                     SGLILLDDLGHAWLFRRSRENGAEGARVEYRGMSCHFEPSLELPEEILNAPEALAPKR
                     "
BASE COUNT          683 a         1652 c         1646 g          747 t
ORIGIN      
        1 tgcggaccgc agccgctcgg tatcgccgtc atcccggcga gcagactcga cggcggcttc
       61 tacgaaactc tggcggagct cttcgcgacc gtgctcaagg tgctcgaggt gcggcgcggg
      121 ctgccccccg agccccgtca gtcgcccgcc gcgcgcgccc gctcgtaatc cttcgcggct
      181 ttgtcaatca gcgcgtagtc gcgcgcggcg cgctccgctt ccgcctcgag cacggccgta
      241 aagagcgtga gaccccaaat gccgttctcc ggccggcgcc gaaacggata gcgcgttccc
      301 cgcgcggttt cgacggtggc acgttctccg tgttgctcga cgcgcgcgac gcccgagagg
      361 tccttgcgca gccgcgccat gaagccgaga cgccgcgcgt agagcgcgaa tacgtcggcg
      421 ccgtcggcgg ccgtcgcttc ttcgacgtgt tctcggctga gctctccccg ctgtggctcc
      481 ggataggccg cgagcacccg ctcgcgagcg cgccggcggt agtcacggat ggtgtaacag
      541 gcgtgctcgg ccgtggtctc gaggtacgcg aagaattgcg cgggctcgcc gcggttcacg
      601 gcgatgacga cgcggtagta ggcaccttcc ggcgtgcgat cgctcgggta aagcaggtgc
      661 gcgccgacca cggagagcac gccgagccct gcgagcaggc cgagcagtga ccagacgagc
      721 ttacgtcgtg tccacgggcc gcgaaaaaac gacatgcgcg gcgactatag cgccgggcgc
      781 cgcgcgacca agcctcgacc ccgcgccagc gcgtcgagcg cccgcgccgc ccaccgagcg
      841 tgacggcgag cggcgcggtg ctgctttgct cgagcctcag tgtcgcgtct ccgtctgctt
      901 cgtgttgatc ggaatcgcgc gacccttttg ctcctgttta ttttcgggca ccggcatcgt
      961 gacttcgagg actccttggt cgaaggaggc ctgaatcgag tccgggctca cgccctcggg
     1021 cagcgcgatg ctgcgccgga acgagccgta ctcccgttca cagcggtaaa cgccgccctt
     1081 ttcgtgctca tgctcgtggc tgcgttcgcc cgcgatcgtg agcacgccgt cctcgacgtt
     1141 gaccttcacg tcctcttggc gcatgcccgg caaatccgcg tgcacggtga gcttgccgtc
     1201 gcgctcgaag acgtccatgc gcggcacgaa atcgatgccc gtgctcgtgc cgctgcgctc
     1261 gccgccacgc gaccagagcg agcgcccgag cccgaaatcg tcgaagaagc ggtccatgtc
     1321 gctcatcatc cggctcatga gcgagaacgg tgaccacgac ccgccgcgct ggagctcgcc
     1381 cgtgcggacc tgcggtgtcc ccctttgtgt ctgcggtgtt cccccttgcc cctgcgggct
     1441 gcccccttgg ccttgagtgg tgatattgcg tgattcggcc atgatgcttc tctccttcct
     1501 cgctgctgca gtgcagcgac gagcgttcgc gagcgcagcc gttccaccgt cttcggtgcc
     1561 ggcatgaaaa acctcgctat agcgaaacga agcaaatcga aggccagccg agggccggtg
     1621 ggtgccgcgt cgccggggcg cgctgcctcg acgagcgaaa ttgagcgcgg cgaaagcaca
     1681 cccgagccga accaccgacg catgctgacg tggagcggca tcgcacgtgt tcgctgacgc
     1741 gcgcatcgcc gtggtggtac ccgcctaccg tgaagagcgc ctcatcgcgc gcatgctcgt
     1801 gcgcatcccg gcgtacgtgg atgcgattta cgtggtggac gatgcgagcc ccgacgccac
     1861 cctgaaagcc gctacgggcg tcgccgatcc ccgcatcaag gtcgtccgcc acaccgagaa
     1921 ccgcggcgtc ggcgcggcca tcgtgagcgg ctatcgggca gccctcgccg acggccacga
     1981 cgtactcggc gtgatggccg gcgacgacca gatgcacccc gacgacctcg agccgctcct
     2041 ttcagccgtg ctcgcgggcg ccgattacgc caaaggtaac cgcttcgttc acgccgaggc
     2101 tcgcaaaatg ccgctcgccc gccgcgtcgg ggggcacttc ctctcacttt tgacgcggcg
     2161 cgcttcaggt ctccccgtga gcgacaccca atgcggtttc accgcgcttt ctgccagggc
     2221 cgcacgcgcc ctgccgctcg acgagctctg gccgcgctac gggtacccga acgacctctt
     2281 gctcctactc gcggcccagc gcttccgcgt cgcggaggtg cccgtccgac cggtgtacgc
     2341 ggacgagaag agcggcctcc ggccgtggca cgtcgtcaag atcgtggggg tgatcgctcg
     2401 tcgctacgtc cgcgtcgccc gctcgacgag tgcctcggcg tagcggagcg cgtgctcgag
     2461 gtcgaagcag ccgtcgagct cgctcggcgt gaggcgcgag gtgatgtcgc tatcggcgcc
     2521 gagcagcgcg cggaattcac cttcaccgcg gaaggcgccc atggcgcttc gctggacgat
     2581 ttcgtaagcc gcctggcgcg cgaggccctt ctcgacgagc gcgagcatga cggcttcgct
     2641 gaagaagagc ccgccgctgc gcgcgaggtt ttgatcgaga cgctcggggt agacgacgag
     2701 gccttcgacg agtcccgccg cgcgctcgag catgaagccg agcgtcgccg tggcatcggg
     2761 agccagcatg cgctcgaccg acgagtgcga gatgtcgcgc tcgtgccaga gcgcgacgtt
     2821 ctcgagcgcg ggcgtcacgg ccgcgcgcac gacgcgcgcc aggccgcaca ggttctcgct
     2881 gaggacgggg ttacgcttgt gcggcatcgc gctcgagccc ttttgaccgg ccgaaaacct
     2941 ctcctcggct tcgccgacct cggtgcgctg ccaatgacgg acgttcgtcg cgagccgctc
     3001 gatgccggcc gcgagcagcg cgagcgcggc aaagaaagcc gcgtggcggt cgcgtgcgac
     3061 gacctgagtc gagacggtct cggcggcgag gccgagcttt cggagcgcct cggcctcgat
     3121 ctcgggcgag aggtgcgcgt aggtgccgac ggcgccggcg attttgccga cggcgatctc
     3181 ttcgcgagca cgggcgagcc gcgcgcgacc gcgccggatt tcggcgaggt gtccggcgag
     3241 cgcgacgccg aacgtcgtcg gctcggcgtg gataccgtgc gagcggccga tcatcggcgt
     3301 acgggcgtgt tcgcgtgccc gctgcgcgag cttttcggcg agcgtgtcgg tgcgcgcgag
     3361 caagagatcg gtcgcgcgca cgagcaggca cgcaaggctc gtgtcgagca cgtcgctcga
     3421 ggtcatcccg cggtgaagcc agcgcgccgg atcgcccgcg agctcttcga catgcgtcag
     3481 aaaggcgatc acgtcgtgcc gcgtcttctg ctcgattcgg tcgatcgccg ccgggtccag
     3541 caccaggttc ttggcgcgga tcgcggccgc cgtgccgcgc gggacgtgac cggcgctctc
     3601 gagcgcctcg caggcggcga gctccacgtc gagccaggtc tggtagcggg ttttatcgga
     3661 ccagagctcg gcgaagtcct tgggcgtgta gcgcgggatc atgcgcggag gctcctacga
     3721 gagtcaccgc ttcggcgcaa gcgcctccgg ggcgttcagg atctcctcgg gcaactcgag
     3781 gctcggctcg aaatgacagc tcatgccgcg gtactcgacg cgcgcgccct ccgcgccgtt
     3841 ttcacgcgag cgccggaata gccacgcgtg cccgaggtca tcgagcagga tcaggccgga
     3901 ctcgggtgcc gcaggatcgg gcgcgccccc gggcgcggag tggagctcga aagcggccgc
     3961 gcagggcgcg accttcgtcc cgtggagcac cgcgtccccg gtgagcatgg cgcgcggcgg
     4021 ctccacggcg tccgtgacga ggacgggatg gtgcgcgccc gggtaaccgc gggcgacgag
     4081 acgcgccgtc gtcgtgcgct cggcaggggt gcacgcggcg ggcgtcgcgg gcaaatcgag
     4141 ctcggtagga acggcgatgg ggctgccggc gacggggcct tgagcgttca gcgggaagag
     4201 gcgcgcctcg gctcgacgac cgcgctcgtc gagcttctcg acgtggagcg ccgcttcacc
     4261 cttgaaatag gtgatgttga tgagctgcgc gacgccgaac gcttcgggat cgggcaggcc
     4321 gacactggcg gcgtcgaacg cccacgcgcc gttcgtcatg cgggcccgcg cgagcgctcc
     4381 gccgcgcgcg agcagcatga gtcccacgtg ctccgagccg aggtgcgcca tctcggctcg
     4441 cgccgcacgc ggcagcgccg acggccagtt gatcgcgacc acgggcacga cgctcgtccc
     4501 gtcgaggaag tacgtcggct gatcggcgcg cgtgcgcgcg tgcacgcgca cgtaaatccc
     4561 gcgttcggcg atgctcacca aatcgggccg cgcgctctgg acgccgccgc ccgcacgctc
     4621 gtagtcgccc ggtgtgtaga gtcccgcgtc gggcaggcgc gcccgagcgc tgcgcccctc
     4681 gaacaagttg tcccacgcga cctcgatgtc gcgcagccgt ccgccgct
//
LOCUS       DATIML010001184         4307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_537247, whole genome shotgun sequence.
ACCESSION   DATIML010001184 DATIML010000000
VERSION     DATIML010001184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4307
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_537247"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VLJ38_20420"
     CDS             complement(<1..296)
                     /locus_tag="VLJ38_20420"
                     /inference="COORDINATES: protein motif:HMM:NF023880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose acetyltransferase domain-containing
                     protein"
                     /protein_id="HSU41962.1"
                     /translation="MPTEREKMLAGQLYDAVDPELVAARKRARELCRTLNGLPEAEAD
                     ERRSILRDLFATGGDSVWMQPPFFCDYGFNIELGERVFFNFNCVVLDVCKVRIG"
     gene            complement(359..432)
                     /locus_tag="VLJ38_20425"
     tRNA            complement(359..432)
                     /locus_tag="VLJ38_20425"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(396..398),aa:Met,seq:cat)
     gene            complement(471..1274)
                     /locus_tag="VLJ38_20430"
     CDS             complement(471..1274)
                     /locus_tag="VLJ38_20430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HSU41963.1"
                     /translation="MLFDTHCHLDEATFPEGTDAVLERARAAGVRAFTCIGVGSLEHA
                     EAAVALAERRPDVVATVGVHPHDANTADAALEAELAALGARERVVAIGEVGLDFHYDH
                     SPRETQQNVFRRFIALARRLHKPLVIHTRSAPGETLAILEAEAARDVGGVIHCFSEDR
                     AFAARALDLGFYLSFSGILTFKNARSVHDVAAWAPEERLLVETDSPYLAPVPLRGKKC
                     EPAFVHHTALRQAELRRSDPERIAASTSENAARVFGVSFHGDRLVSGRA"
     gene            complement(1274..3526)
                     /locus_tag="VLJ38_20435"
     CDS             complement(1274..3526)
                     /locus_tag="VLJ38_20435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protein kinase PrkA"
                     /protein_id="HSU41964.1"
                     /translation="MGTSILDELSGITQRVEQDFRDERRLLTFREYLELFASNPVRYS
                     RDACRYLRDMFAYYGRTELVRPWGEESRFKLFDLPFLDPAEAAAEALVGQEQVQHEVH
                     RALENFGREGRPTRLVLLHGPNGSAKSTIAQCIMRALEHYSAEEEGALYRFHWVFPNQ
                     TRLRGSIGFGGRRPSQRPDDASYAHLPLEEMDARLHIEVRDHPLFLLPLEARMKLLSR
                     LYAEVGAQEAPPDWVLRGSLAHKSRQVYDSLLASYDGALDEVLRHVQVERYFISRRYR
                     VGAVTVGPELSVDAGERQLTADRNPAALPAALQSLTLFEAYGEIIDAMGGVIEFSDLL
                     KRPLDAFKYLQITAETGEVQLRSQTIQVNCVLLGSANEVHLGAFREHVEYESFRGRLE
                     LVRAPYLLSYFDEKKIYDAQIAPQARRHVAPHATELAAMFAVLTRMRRPNPERYEGQL
                     RELVTNLTAIEKMDLYATGAPPGHLDDDDAKVLRAAIPRIYHESDAYPIFEGSVGASP
                     REMRGVLLDAAQSPRHDCLSPLAVLLEIDKLCERAGEYSFLQEERLPGGYHDHVLFRR
                     TLRERLLEALEDELRIASGLVDEARYAALFTRYVTHVSFWVKREKLRNPMTGQYEDPD
                     ERLMGEVEGLLRGSENPQELRNSLINSIAAWAIDHPDDPIDHSRIFATQLKRLREAVF
                     AERRLPIAKLCRDVMILLREEGSGLDEARRTAATRVLEELKRRFGYEDSSAGDAAAVL
                     VSERFADLLR"
     gene            complement(3566..4132)
                     /locus_tag="VLJ38_20440"
     CDS             complement(3566..4132)
                     /locus_tag="VLJ38_20440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41965.1"
                     /translation="MSVLRVFVPLALVALSASCKREAPPAGEDARAPTSESVPAAAKE
                     TAAVVAASAPSAAAAPAPATAADASGPNHYDEQKFALLAQPSGAYAAGKEGTVEIVLD
                     AKPPFHANQQYPYKFKTKEAAGVKFAQPVVGKDAAKIEQQRVTMRVPFVPDAAGQCTV
                     SGQFAFSVCTEETCLIEKRDLALVVDVK"
BASE COUNT          698 a         1408 c         1476 g          725 t
ORIGIN      
        1 ctgccgatgc ggactttgca gacgtcgagg acgacgcagt tgaagttgaa gaagacgcgc
       61 tctccgagct cgatgttgaa cccgtagtca cagaagaacg gcggttgcat ccagaccgag
      121 tcgccgcccg tcgcgaacag atcgcgcagg atcgagcgtc gctcgtccgc ttcggcctct
      181 ggtagcccat tgagggttcg acacagctcg cgcgcgcgct tgcgtgcagc cacgagctcc
      241 ggatcgacgg cgtcgtagag ctgtcccgcg agcattttct cccgttcggt aggcatgctc
      301 tgcgtattac agctgcccct gcccacggat acgagaaact aaaccgggct gtgatcggtg
      361 ccgagagacg gacttgaacc gtcgacacca cgcttatgaa gcgcgtgctc taaccagctg
      421 agctacctcg gcaaaagccc gcggaatatg ggcgggccac ccccgggctg tcaagcacga
      481 ccgctgacaa gccggtcccc atggaagctc acgccgaaca cgcgggccgc attttcgctc
      541 gtcgaagccg cgatgcgctc ggggtccgag cgccggagct ctgcctggcg gagcgcggtg
      601 tggtggacga acgcgggctc gcactttttg ccccgcagcg ggacgggcgc caggtacggg
      661 ctgtcggtct ccacgagcag gcgctcctcg ggcgcccagg cggcaacgtc gtggacgctc
      721 cgggcgttct tgaacgtgag gatgccggag aacgagaggt agaagccgag gtcgagcgca
      781 cgtgcggcga acgcgcggtc ttcactgaag cagtgaatga cgccgcccac gtcgcgcgcc
      841 gcttcggctt cgaggatggc gagggtctcg cccggcgcgc tgcgggtgtg gatcacgagc
      901 ggcttgtgca gccggcgcgc gagcgcgatg aaccgccgaa acacgttctg ctgcgtttcc
      961 cgcggcgagt gatcgtagtg aaagtcgagt cccacttccc cgatcgcgac gacgcgctcg
     1021 cgcgcaccaa gcgctgcgag ctccgcttcc agggcggcgt cggccgtgtt cgcgtcgtgc
     1081 gggtggacgc ctaccgtggc gacgacgtcc gggcgccgct cggcgagcgc gaccgcggcc
     1141 tctgcgtgct cgagcgagcc cacgccgatg caagtgaacg cacgaacccc ggccgcgcgc
     1201 gctcgctcga gcaccgcgtc cgttccctcg gggaaggtcg cttcgtcgag gtggcagtgc
     1261 gtgtcgaaca gcatcagcgc aagagatcgg cgaagcgttc gctcacgagc acggccgcgg
     1321 cgtcacccgc cgagctgtcc tcgtagccga agcggcgctt gagctcttcg agcacgcgcg
     1381 tggccgccgt gcgccgcgcc tcgtcgaggc cgctgccctc ctcgcgcaag aggatcatca
     1441 cgtcgcggca gagcttggcg atcgggagcc ggcgctcggc gaataccgct tcgcgcaggc
     1501 gcttgagctg cgtcgcgaag atgcgcgagt gatcgatggg gtcgtccggg tgatcgatgg
     1561 cccaggcggc gatggagttg atgagcgagt ttctgagctc ctgcgggttt tcgctgcccc
     1621 ggagcaggcc ttcgacttcg cccatcagcc gttcatcggg gtcttcgtac tggccggtca
     1681 tgggatttct gagcttctcg cgtttgaccc agaagcttac gtgcgtgacg tagcgcgtaa
     1741 acagcgcggc gtagcgcgct tcgtcgacga gcccgctcgc gatgcggagc tcgtcctcga
     1801 gcgcctcgag caaacgctcg cgcagtgtgc gacggaagag cacgtggtcg tggtagccgc
     1861 ccggcagccg ttcctcttgc aggaacgagt attcgccggc acgttcgcat agtttgtcga
     1921 tctcgagcag cacggcgagc ggcgagaggc agtcgtggcg cggactctgc gccgcgtcga
     1981 ggagcacgcc gcgcatctcg cgcgggctcg cccccacgct gccctcgaag atgggatagg
     2041 cgtcgctctc gtggtaaatc cgcggaatcg ccgcgcgcag gaccttcgcg tcgtcgtcgt
     2101 cgaggtggcc cggcggcgcg cccgtagcgt aaaggtccat tttctcgatg gcggtcaggt
     2161 tcgtgacgag ctctctcagc tgcccctcgt agcgctcggg attcggccgt cgcatgcgcg
     2221 tgagcacggc gaacatcgcc gcgagctccg tcgcgtgggg cgcgacgtga cggcgcgcct
     2281 ggggcgcaat ttgcgcgtcg taaatcttct tctcgtcgaa gtagctgagg aggtacggcg
     2341 cgcgcacgag ctcgagccgg ccacgaaagc tctcgtattc gacgtgctcg cggaaagcgc
     2401 cgaggtgaac ctcgttcgcg ctgccgagca gcacgcagtt gacctggatc gtctgcgaac
     2461 gcagctggac ctcgccggtt tcggccgtga tttgcaggta cttgaaggcg tcgagcggcc
     2521 gcttcaaaag gtccgagaac tcgatcacgc cgcccatggc gtcgatgatc tcgccgtaag
     2581 cctcgaacag cgtgagcgat tggagcgcgg ccggaagcgc ggcggggttg cgatcggcgg
     2641 tgagctggcg ctcgccggca tcgacggaga gctcgggacc gaccgtgacg gcgccgaccc
     2701 ggtaacgccg cgagatgaag tagcgctcga cctgcacgtg acgcaagacc tcgtcgagcg
     2761 cgccgtcgta gctcgcgagc agcgagtcgt aaacctgccg gctcttatgc gcgaggctgc
     2821 cgcggaggac ccaatcgggc ggcgcttcct gggcgccgac ttccgcgtag agccggctca
     2881 gcagcttcat gcgcgcttcg agcggcaaga gaaagagcgg gtggtcgcgc acctcgatgt
     2941 ggaggcgcgc gtccatttcc tcgagcggca agtgcgcgta gctcgcgtcg tcggggcgct
     3001 gagacggccg cctgccaccg aagcctatcg agccgcgcag gcgcgtctgg ttcgggaaga
     3061 cccagtggaa gcgatagagc gcgccctctt cctcggccga gtagtgctcg agcgcgcgca
     3121 tgatgcactg agcgatggtg ctcttggccg agccgttcgg cccgtgcaag aggacgaggc
     3181 gcgtcggtcg accttcccgc ccgaagtttt cgagcgcgcg gtgcacctcg tgctgcacct
     3241 gctcttgccc gacgagcgcc tcggccgccg cctcggccgg atcgaggaac ggcagatcga
     3301 agagcttgaa gcgactctcc tcgccccagg ggcgcacgag ctccgtccgg ccgtagtacg
     3361 cgaacatgtc gcgcaggtag cgacacgcgt cccgggagta gcgcacggga ttggacgcga
     3421 agagctcgag gtattcgcgg aacgtgagca ggcgccgctc gtcgcgaaag tcctgctcca
     3481 cacgctgcgt gatgcctgaa agctcgtcga ggatgctggt ccccatcacc gttgctctga
     3541 cgttgctctg acgcccgttt aggggctatt tcacgtccac gacgagagcc aaatcgcgct
     3601 tctcgatcaa gcacgtctct tccgtgcaga ccgagaacgc gaactggccg ctcaccgtgc
     3661 actgacccgc ggcatccgga acgaacggca cgcgcatcgt cacgcgctgc tgctcgatct
     3721 tggccgcatc cttaccgacg accggctgcg caaacttcac gccggccgcc tccttcgttt
     3781 tgaatttgta cgggtactgc tggtttgcat gaaagggtgg cttcgcgtcg agcacgatct
     3841 cgaccgtgcc ctccttgccc gcggcgtacg cgccgctcgg ctgggcgagg agcgcgaatt
     3901 tctgctcgtc gtagtggttc ggcccgctcg cgtcggcggc cgtggcaggg gcgggcgcag
     3961 cagcagcgga cggtgctgac gctgcgacga ctgctgcggt ctccttcgct gcggccggaa
     4021 cggactcact ggtcggagct cgagcgtcct caccggcggg gggcgcttcc cgcttgcaac
     4081 tggcgcttag cgcgacgagc gccagcggca cgaacacgcg cagaacggac atggcttcct
     4141 tttctaccac aaggggggca gcccccaagt cgaggctccg gctttagtgc agcaccacca
     4201 aaagcacgac gatcacgacg agcagcccgc cgccgatgag cgcgaagagc agccaattcg
     4261 ggggcgactt cgggatcccc gccatggcca tatcgcggag catgctc
//
LOCUS       DATIML010001185         3472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3713854, whole genome shotgun sequence.
ACCESSION   DATIML010001185 DATIML010000000
VERSION     DATIML010001185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3713854"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..981
                     /locus_tag="VLJ38_20445"
     CDS             91..981
                     /locus_tag="VLJ38_20445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41966.1"
                     /translation="MSGKLGTIARLGFSFGAAMALPLSSSAAPTTVPNFLTQQGRLFD
                     NTGAPVAGSPQFVFTIYTDAAGTTTLWTETQSIALDAGYFSTTLGSVTALPTTLFNGT
                     TRYLGIKVGTDPEMSPRQPLTSVPYALIAGNATGDITPTSVSVAGAVVIDSAGHWVGS
                     AAGLAGPTGPTGPKGTDGATGPTGPAGTKGATGATGPAGPAGPQGPLGPTGPQGPAGP
                     TNYSAITTVTGPGATGSQSASDTATCPANSYVLGGGCYTDHFVKVSEPSGNNAWACTA
                     QDEFDRTDNVGITAYARCSP"
     gene            complement(998..3001)
                     /locus_tag="VLJ38_20450"
     CDS             complement(998..3001)
                     /locus_tag="VLJ38_20450"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HSU41967.1"
                     /translation="MGAPLCVGALAGLGRPGIEWTPLFFVGELTLAYLASSAPRLVQA
                     GLIGASFGLGLFSFIALGSLSWGVTVPASLVLIGVALYALPLALCCWGLPRLFSGVAL
                     FFATVAAWSLCLDVGDALKFPLKEAAQSLVISAPLLAAGARLVGSNVLSGILLATELL
                     VARALARRRSEGIAVRAAGALPALAAGVGVLALLGSVAQVTAPAPGRSVEVGVPQINT
                     GAEYYASRLLRPELARVFDQTFERLLADLAGAELVVTTEGFDGRFGLSLPLVRARWQA
                     EAKRRDQALAVTSYTVEHGFKGNAVAGFDRRGEVVGVHRKVDLALEGEKMLVAGAGYE
                     VFRFDRDLRVGVPLCIESLLTRAPFAMTRAGATLLAASTSDLSFGSNVTAFEHLATTA
                     LRAIETGRAIVWASNGGPSGVIDRWGNFEIGAPFRVTRATRVRAALHADTTPYLSCAP
                     VVTALCVVLLLALTSVALFGRRRVPDADVDARLFVATQTPLAAAVATALAFFGSAALV
                     LSGPALVELTHGVPARALGAVRETLRPPRFSVPPAAFARFRTAADRTAPGAIAYFLTY
                     YGIETSNESLPPGLPATPSLADVQAYLTEHFELPTERIAVEPGRLPRVAAIVRGRDGA
                     FGVVSDPAGDGHPLVFGPALATSVPVSPRALSNAASHVALVPR"
     gene            complement(3040..>3472)
                     /locus_tag="VLJ38_20455"
     CDS             complement(3040..>3472)
                     /locus_tag="VLJ38_20455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41968.1"
                     /translation="HRASPQAASSPANTDGTAARAPTRFPPPDAAGPPKQARVAASGL
                     RFVVLWPGTGTAKPKSDDKLSLRLTLWPVLGLVVDNPLFAEKPSATTLARAPAGLASV
                     LQTLTVGSVVRVWLPPGKAEQVGPVPAGREAVLDITLEQLE"
BASE COUNT          627 a         1206 c         1194 g          445 t
ORIGIN      
        1 cggcggcaac gcggtttaca cgtcgaaaca ctatcgtctc gtcacgggcg tcgtcggcac
       61 gacgcagccg tagtcggagg acaccaggtc atgtcaggca aattaggaac gatcgcacgc
      121 ttggggtttt cgttcggcgc cgcgatggcg ctgccgttga gctcgagcgc cgcgccgacg
      181 acggtgccga actttttgac gcaacagggc cgtctgttcg acaacaccgg cgcccccgtg
      241 gcgggctcac cccagttcgt gttcacgatt tacaccgacg cggcgggcac gacgaccctg
      301 tggaccgaga cgcagagcat tgcactcgat gcgggctact tttcgaccac gctcggcagc
      361 gtgaccgcgc tacctacgac tcttttcaac ggcaccacgc gctacctcgg catcaaggtc
      421 ggcaccgatc cggaaatgtc gccgcgccag ccgctcacga gcgttcccta cgcgctcatc
      481 gcgggcaacg cgaccggcga catcacgccg acgagcgtct ccgtcgcggg tgccgtcgtc
      541 atcgactcgg cgggtcactg ggtcggcagc gcagcaggtc tcgctggccc gacgggaccc
      601 actggcccca aaggcacaga cggcgcaacg ggtccgaccg gccctgcagg caccaagggc
      661 gcgacaggcg ccacagggcc ggcaggtcct gcggggcctc aaggacccct aggtccaacg
      721 ggacctcaag gccccgcagg tccgaccaac tactcggcca tcacgacagt gacgggcccg
      781 ggcgcgacgg gctcgcagag cgccagcgac acggcgacgt gccccgcgaa cagctacgtc
      841 ctcggtggcg gttgttacac ggatcacttc gtcaaagtgt cggagccgtc cggcaacaat
      901 gcgtgggcct gcaccgcgca agacgaattc gatcgtaccg acaacgtcgg catcacggcc
      961 tacgcgcgct gcagtcctta gtggatgggc aacgcgctca gcgcggcacc aacgcgacgt
     1021 gggaagcagc gttgctcaac gcgcgtggac tcacggggac actcgttgcg agcgccgggc
     1081 cgaagacgag cgggtgtccg tctcccgctg gatcgctcac gacgccgaag gcgccgtcgc
     1141 gaccgcgcac gatggccgcg acccggggga gacgcccggg ctcgaccgcg atgcgctcgg
     1201 tcggcagctc gaagtgctcg gtgaggtacg cctgcacgtc agcgagtgac ggcgtcgccg
     1261 gcagccccgg cggcagggac tcgttgctcg tttcgatacc gtaataggtc agaaagtagg
     1321 cgatcgcgcc cggggccgtt cggtcggccg ccgtccggaa gcgcgcgaaa gcggcggggg
     1381 gcaccgaaaa gcgcggcggg cgcagcgtct cgcgcacggc gccgagcgca cgtgcgggga
     1441 cgccgtgcgt gagctcgacg agcgcggggc cgctgaggac cagcgcggcg gacccaaaga
     1501 acgcgagcgc cgtcgccacg gccgccgcga gtggggtctg ggtagcgacg aacagtcgcg
     1561 catcgacgtc agcgtcgggc acgcggcggc gtccaaacag cgcgacagag gtcagcgcca
     1621 gcagtaggac gacgcacagg gcggtcacga ctggcgcgca cgacaggtac ggcgtcgtgt
     1681 cggcgtgcag ggcggcccgc acgcgcgtcg cgcgcgtgac gcgaaacggg gcgccaatct
     1741 cgaagttacc ccagcgatcg atgacgcccg aaggaccgcc gttactcgcc cacacaatcg
     1801 cacgccccgt ttcgatggct ctgagcgccg tcgttgcgag gtgttcgaat gcggtgacgt
     1861 tgctcccgaa gctcaagtcg ctcgtgctcg cagcgaggag cgtcgcgccc gctcgcgtca
     1921 tggcgaacgg cgctctcgtg agcaaggatt cgatgcagag cggcacgccg acacgcagat
     1981 cgcggtcgaa gcgaaacacc tcgtagccgg cgccggcgac cagcatcttc tcgccttcga
     2041 gcgcgagatc gaccttacga tgaacgccga cgacctcacc gcgccgatcg aagccggcga
     2101 cggcgtttcc cttgaagccg tgctcgaccg tgtaggacgt gacggcgagc gcttgatcgc
     2161 gtcgcttggc ttccgcctgc cagcgcgcgc gcacgagcgg caagctcaaa ccgaagcgac
     2221 cgtcgaagcc ctccgtcgtg acgacgagct cggcgccggc gagatccgcg agcagtcgct
     2281 cgaaggtctg gtcgaacaca cgagcaagct ccggacgcag gagccgcgag gcgtagtact
     2341 ccgcgcccgt gttgatctgg ggtacgccca cttccacgct gcgccccggc gccggcgccg
     2401 tcacttgagc cacggagccg agcagcgcaa gcacgccgac gcccgcagcc agagccggca
     2461 gcgcgccagc cgcgcgcacc gcgatgcctt cgctccgtcg cctcgccaac gcgcgcgcga
     2521 cgagcaattc cgtcgcgagc aggatgcccg agagcacgtt ggacccgacg agccgggcgc
     2581 cggcggcgag cagcggcgcg gagatcacca gactctgcgc cgcttccttg agcggaaact
     2641 tgagcgcgtc tcccacgtcg aggcagagcg accacgcggc gaccgtcgcg aagaacagcg
     2701 ctacgccgct gaaaagccgc ggcaatcccc aacaacagag cgcgagcggc aaagcataca
     2761 gggcaacgcc gatgagcacg agcgaggccg gcaccgtgac tccccagctc agactcccga
     2821 gcgcgatgaa cgaaaacagt ccgaggccga agctcgcgcc gatcagcccg gcctgaacga
     2881 gccgcggcgc ggagctcgct aggtaggcga gcgtgagctc tcccacgaaa aacaagggtg
     2941 tccactcgat gcctggacgg ccgaggcccg cgagcgcccc gacgcaaagc ggcgcgccca
     3001 cgagcgcgaa cgagcgcgaa gcgactgagc gcagccgagc tattcgagct gctccaacgt
     3061 gatgtcgagc accgcttctc gacctgcggg gaccggcccg acctgctcgg ctttgccggg
     3121 cggcagccag acccgcacga cgctccctac cgtcaaagtc tggagtaccg aggccaaacc
     3181 ggccggcgca cgcgccagcg tggtcgcgct cggcttctcc gcgaacaggg gattatcgac
     3241 gacgagtccg agcacgggcc agagggtgag acgcagagat agcttgtcgt cggacttcgg
     3301 tttcgccgta ccggtgcccg gccagagcac gacgaagcgg agaccgctcg ccgcaacccg
     3361 tgcctgtttg ggcggaccgg cggcgtccgg aggcgggaag cgagtcgggg cgcgcgcggc
     3421 cgttccgtcc gtatttgcag gcgagctcgc ggcctgcggc gatgcgcgat gg
//
LOCUS       DATIML010001186         4689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3713997, whole genome shotgun sequence.
ACCESSION   DATIML010001186 DATIML010000000
VERSION     DATIML010001186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4689
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3713997"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VLJ38_20460"
     CDS             complement(<1..197)
                     /locus_tag="VLJ38_20460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41969.1"
                     /translation="MRLLFVSLSLGVVALSLNGCGDDDSGGDGAHGTNGGSGGSTAGG
                     SAGRGSGGTSGTGGHVDRAGR"
     gene            344..1705
                     /locus_tag="VLJ38_20465"
     CDS             344..1705
                     /locus_tag="VLJ38_20465"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HSU41970.1"
                     /translation="MTKSPEELGFERLRKSDAAKCKVAVTDIDGVLRGKYIHKSKLES
                     ALEGGLGFCNVVLGWDSADVCYDNARYTGWHTGYPDAHVRLDVGTYREVPWDGRVPFL
                     LGEFVDPRGEPLPICPRQLLKRVLGRAHDAGFDVVAAFEYEFFHFRETSQTLEEAGYV
                     RPQTLTPGMFGYSLLRLNQSKDYVNALFDELAAFGVPIEGLHTETGPGVLEAAILYSE
                     ALEAADRAVLFKASSKEIAHRFGIMPSFMAKWRSDLPGCSGHIHQSLWTREKKNAFFA
                     ADDARGLSRTFEHYLAGQLHCLPEILPLFAPTINSYKRLVEGAWAPTKANWGIDNRTT
                     ALRAIPAGEKSTRLETRVNGSDSNPYLALAAAVASGLYGIEHQLALQPAVTGSGYADA
                     EAVSLPRNLAEATDGFEQSAVARELFGAAFVEHFTATRRWEWRQFGRAVTDWELARYF
                     EII"
     gene            1735..2928
                     /locus_tag="VLJ38_20470"
     CDS             1735..2928
                     /locus_tag="VLJ38_20470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HSU41971.1"
                     /translation="MTIFQYNFPTRIQFGPGAVRGLAPALAELGKQRPLIVTDRGLAP
                     LAPVTRTRDALAQAGLDVAVFSGVWGNPVKSQVTAGVAAFKAHGADSIVGLGGGAAID
                     VAKAILLMVNHPGDLFDYEDEKPGARPIDREIPYWVSVPTTAGTGSEVGRSTVISDDE
                     THVKKIIFSPKLLAARVFLDPELTLELPAAVTAATGMDALTHLVEAYLAKGFQPLCDG
                     IALAGAKLVAQGLPRAVEFARRIEHGDKELVHAPEHVEARGQMLNAATMGGVAFQKGL
                     GVTHSLAHALSTVCDLHHGLANGIAIPYAMSFNASVAAERLTDLAHMVGAKEQSARGF
                     VVWLEQLREHIGIPHDLRAAGVRDEHLDRLVQIAVADACHPNNPRPVSEPDFRALFRQ
                     ALGPI"
     gene            2958..4325
                     /locus_tag="VLJ38_20475"
     CDS             2958..4325
                     /locus_tag="VLJ38_20475"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSU41972.1"
                     /translation="MKILNPANLALVAEVEEDTPASVAAAYARARRAQPAWATTPLET
                     RLAAITRFRELVAERKDELALTLTREMGKPITQSHNELAALSGRIDFFLTHTAGVLDE
                     ETVHTQPNALAEVITHEPLGVIANVSAWNYPWFVGSNVFVPALLTGNAVLYKPSEHAT
                     LTGQHIAELLHLAGVPEDVFVTVVGGGAIGAAVVEQPVDGVFFTGSYATGRRIAERVA
                     LRMIRLQLELGGKDPTYVTEDVDVRAAAESLADGAMYNGGQSCCSVERIYVHEKIYDA
                     FVDAYVKEVKGFKVGDPLDEATYIGAITRKPQLAVLQKQVSDAKKKGARLLAGGAPIK
                     GKGNWFAPTVLADTDHTMLVMRDESFGPIIGLQPVADDAAAVELMNDTEYGLTAGVYC
                     RDEKRAKRILKRVNAGTVYWNCCDRVSPRLPWSGVKHSGIGLTLSTYGIQTFTRPKAW
                     HLRTA"
     gene            complement(4311..>4689)
                     /locus_tag="VLJ38_20480"
     CDS             complement(4311..>4689)
                     /locus_tag="VLJ38_20480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HSU41973.1"
                     /translation="IGQSNIVGRPMALELLMARCTVTICHSATRDLPGTVRGADIVVA
                     GVGKPKFVQRDWVKPGAIVIDVGINRLPDGKLCGDVDFDAVQDLASWITPVPGGVGPM
                     TIATLLANTLAAAKWQQGGSGGP"
BASE COUNT          811 a         1580 c         1542 g          756 t
ORIGIN      
        1 tcgcggccgg cgcggtcgac gtgtcccccc gtacccgaag tacctccgct gccgcgccct
       61 gcgctgccac cggccgtcga gccgccgctg ccgccgttcg tgccgtgggc cccatcgcca
      121 ccactgtcat cgtcgccgca accgttgagt gacagagcta cgaccccgag gctcagcgag
      181 acgaatagca ggcgcatcgg aacctcgttg ggtcaggcaa gaaagagacc ccgctccccc
      241 gcggggcaga acggtcacca gccgatcagc gtagcggatc ctacctttcg cggccaggcc
      301 gcccttccat gcgagcctca cgcgctcgat actcggccgt gcaatgacca agtcgcccga
      361 agagctcggt ttcgagaggc tccgcaagtc cgacgcggcg aagtgcaaag tagcggtcac
      421 cgacatcgac ggagtgctcc gcggcaaata catccataaa agcaagctcg aatccgcgct
      481 cgagggagga ttggggtttt gtaacgtcgt gctcggctgg gactcggcgg acgtctgtta
      541 cgacaacgcg cgctacaccg gctggcacac gggctacccc gacgcacacg tgcgactcga
      601 tgtcggcacg taccgtgaag tgccgtggga cggccgtgtg ccttttctac tcggcgagtt
      661 cgtcgaccca cgcggcgagc cgctgccgat ttgcccgcgg caacttttga agcgcgtgct
      721 cgggcgcgcg cacgacgccg gtttcgacgt ggtcgccgcg ttcgagtacg agttctttca
      781 ttttcgggaa acgtcgcaga cgctcgaaga agccggctac gtgcggccgc agacgctcac
      841 gccgggcatg ttcggctact cgctgctgcg gctgaaccaa agcaaagact acgtgaacgc
      901 gctgttcgac gagctcgcgg cgttcggcgt gcccatcgaa gggctacaca ccgagacggg
      961 tccgggcgtg ctcgaggcgg ccattctcta ctccgaagcg ctcgaggcgg ccgatcgcgc
     1021 cgtgctcttc aaggcgtcat ccaaggagat cgcgcaccgc ttcggcatca tgccgtcatt
     1081 catggccaag tggaggagcg atctgcccgg ctgcagcggc cacattcacc agagcttgtg
     1141 gacgcgcgag aagaagaacg ccttcttcgc cgccgacgac gcgcgcgggc tcagccgcac
     1201 cttcgagcat tacctcgccg ggcagctcca ctgcttgccc gaaattctgc cgctcttcgc
     1261 gccgaccatc aacagctaca agcgtctggt cgagggtgct tgggcaccga ccaaggcgaa
     1321 ctggggcatc gacaatcgca ccacggcgct ccgcgctatc ccggccggtg agaagagcac
     1381 gcgcctcgag acacgcgtga acgggtcgga ttcgaatccg tacctcgcgc tcgccgccgc
     1441 cgtcgcgagc ggactctacg gcatcgagca tcagctcgcg ctgcagcccg ccgtgacggg
     1501 gagtggttac gccgacgccg aggcggtttc gctaccgaga aatctcgccg aggcgaccga
     1561 tggcttcgag cagagcgcgg tcgcgcgcga actcttcggt gcggcgttcg tggagcattt
     1621 cacggcgacg cggcgctggg agtggcgtca attcgggcgt gcggtaacgg attgggagct
     1681 cgcgcgctac ttcgagatta tttgagcgga taaccgccgg tttgaggttc ctgcatgacc
     1741 attttccaat acaattttcc gacgcggatc cagttcgggc ccggagccgt gcgcggtctc
     1801 gcaccggcac tggcggagct aggcaagcag cgacccctga tcgtgacgga tcgcgggctc
     1861 gcgccgctcg cgccggtcac tcggacgcgt gacgcgctcg cgcaggcggg cctcgacgtg
     1921 gcggtttttt cgggggtgtg gggcaacccc gtgaagagcc aagtgacggc gggcgtggcg
     1981 gcgttcaagg cgcacggcgc ggactcgatc gtggggctcg gcggcggcgc cgccatcgac
     2041 gtcgcgaaag cgattttatt gatggtgaat catccgggcg atctattcga ctacgaggac
     2101 gagaagccgg gcgcgcgccc gatcgatcgc gagatcccgt actgggtctc ggtgccgacc
     2161 acggcgggga ccggcagcga agtcggccgt agcaccgtga tttccgacga cgaaacgcac
     2221 gtgaagaaga tcatcttctc gccgaagttg ctggcggcgc gcgtcttcct cgatcccgag
     2281 ctcacgctcg agctgcccgc cgccgtcacc gcggcgacgg gcatggacgc gctcacgcac
     2341 ctggtcgaag cctacctcgc caagggcttt cagccgctct gtgacggaat cgcgctcgcg
     2401 ggcgccaagc tcgtcgccca gggcttgccg cgcgcggtcg agtttgcacg tcgcatcgag
     2461 cacggcgaca aggaactggt gcacgcgccc gagcacgtgg aagcgcgcgg ccagatgctg
     2521 aacgccgcga cgatgggcgg cgtcgcgttc cagaaaggtc tcggcgtgac gcactcgctc
     2581 gcgcacgcgc tctcgaccgt ctgcgatttg caccacggac tcgccaacgg catcgccatc
     2641 ccctacgcca tgagcttcaa cgcgagcgtc gccgccgagc gcctcacgga tctggcgcac
     2701 atggtaggcg ccaaagaaca gagcgcgcgg ggtttcgtgg tttggctcga acagctgcga
     2761 gagcacatcg gcatcccgca cgatttgcgc gccgccggcg tgcgtgacga gcacctcgac
     2821 aggctcgttc agatcgccgt tgccgacgct tgtcacccga acaatccgcg gcccgtgagc
     2881 gagccggact ttcgtgcact ctttcggcaa gcgctcgggc caatttgagc gctcggcaaa
     2941 ctcgaggtta gccacgcatg aagatcctca atcccgccaa tctcgctctc gtcgccgaag
     3001 tcgaagagga cacgcccgcg agcgtcgccg ccgcttacgc acgcgcacgc cgcgcgcagc
     3061 ccgcctgggc gacgacaccg ctcgagacgc gtctcgccgc gatcacgcgc tttcgcgagc
     3121 tcgtggcgga gcgcaaggac gagctcgcgc tgacactcac gcgcgaaatg ggtaagccca
     3181 tcacgcagtc gcacaacgag ctcgccgcgc tgtccggtcg catcgatttt ttcctgacgc
     3241 acaccgcagg cgtgctcgac gaagagacgg tgcacacgca gccgaacgcg ctcgccgagg
     3301 tgatcacgca cgaaccgctc ggcgtgatcg ccaacgtttc ggcctggaat tatccctggt
     3361 tcgtcggttc gaacgtgttc gtgcccgcgc tgctcacggg caacgccgtg ctctacaaac
     3421 cctccgagca cgcgacgctc accgggcagc acatcgccga gctcctgcac ctggcgggag
     3481 tgcccgagga cgtattcgtc acggtcgtgg gcggcggcgc gatcggcgcg gccgtggtcg
     3541 agcagccggt cgacggcgtg ttcttcacgg gcagctacgc gacggggcgc cgcatcgcgg
     3601 aacgcgtggc gctgcgcatg attcggctgc agctcgagct cggcggtaag gacccgacgt
     3661 acgtcaccga agacgtcgac gtgcgcgccg cggcggagag cctcgccgac ggcgcgatgt
     3721 acaacggcgg gcagagctgc tgctccgtcg agcgcatcta cgtgcacgag aagatctacg
     3781 acgcgtttgt cgatgcgtac gtgaaggaag tcaagggctt caaggtgggc gatccgctcg
     3841 acgaggcaac gtacatcggc gcgatcacgc gcaagccgca gcttgcggtg ctgcagaagc
     3901 aggtgtccga tgcgaagaag aaaggcgcgc gcctcctcgc gggtggcgcg ccgatcaagg
     3961 gcaagggtaa ctggtttgcg cccaccgtgc tggccgacac cgaccacacg atgctcgtca
     4021 tgcgcgacga gtcgttcggt cccatcatcg gcctgcaacc ggtggcggac gacgctgcgg
     4081 ccgtcgagct catgaacgac accgagtacg gcctgaccgc gggcgtgtat tgccgcgacg
     4141 agaagcgcgc gaagagaata ctgaagcgcg tgaacgcagg aaccgtctac tggaactgct
     4201 gcgaccgcgt gagcccgcgg ctgccgtggt caggcgtcaa gcattccggc atcgggttga
     4261 cgctgtcgac gtacggcatc cagaccttca cgcgtcccaa ggcgtggcat ctacggaccg
     4321 cctgagccgc cctgctgcca ctttgccgct gccagcgtat tcgccagcag cgttgcgatc
     4381 gtcatcggcc ccacgccgcc gggcacgggc gtaatccagc tcgcgagatc ctgcacggcg
     4441 tcgaagtcca cgtcgccgca gagcttgccg tccggcaggc ggttgatgcc cacgtcgatc
     4501 acgatcgcgc ccggcttcac ccagtcgcgc tgcacgaact tcggcttgcc tacgcccgcg
     4561 accacgatgt cggcgcctcg cacggtgccg ggcaggtcgc gcgtggccga gtgacagatg
     4621 gtcacggtgc atcgcgccat caggagctcc agcgccatcg gccggccgac gatgttggac
     4681 tggccgatc
//
LOCUS       DATIML010001187         2446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1406603, whole genome shotgun sequence.
ACCESSION   DATIML010001187 DATIML010000000
VERSION     DATIML010001187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406603"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VLJ38_20485"
     CDS             complement(<1..678)
                     /locus_tag="VLJ38_20485"
                     /inference="COORDINATES: protein motif:HMM:NF021364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HSU41974.1"
                     /translation="MQSAFEAAVSALVHGPAVEVRDPDEFLARYDFSDDDRAALRAEF
                     ERLLVYRRLVRNTLREAVELAIPRTMARLGALFDEYFERFLAERGPRTHYLRDVTTEL
                     LDFCAPLWPEDTRVPPWALELARHEALEIVISSLRELGTARELGELDLERGLCFVEAA
                     RVTRYAFAVHRLARDAADRAPPERVPTALFVYRDPEYDVRYLELSPLAAALLERLLHG
                     ETLRLALL"
     gene            complement(662..1525)
                     /locus_tag="VLJ38_20490"
     CDS             complement(662..1525)
                     /locus_tag="VLJ38_20490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HSU41975.1"
                     /translation="MRSGVGLGLRWEFLEEVLDGPVLEDIAFFEVSPENYMRRGGYYP
                     AALERIGRKYPLLTHGLTLSIGAARAPDHEYTAELATEVARLDAPWHSDHLAFTSGSG
                     RAFHELLPLRFATDTAKRVAARLEELGETLARPVAIENVTYYAHLGKPELSEGDFLHT
                     LFEHTAAGFLLDVNNVYVNAQNQGQDARRVLESFPLERAVEIHVAGHTRTPSGLVLDT
                     HGAPVVPEVLELLAFALERTGPLPVLLERDNHVPELAVLLAEVRAIRAVCARAALAHE
                     LRQRGPHAVGL"
     gene            complement(1573..1926)
                     /locus_tag="VLJ38_20495"
     CDS             complement(1573..1926)
                     /locus_tag="VLJ38_20495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41976.1"
                     /translation="MNHKLNFQAFASTLAALGLAACGGSASPEPAQSPVAAKEVPGAT
                     GAAPASPAPAAADAAASPGPATSAPSVPAPAAPKADAVPATPAATDNPADPPKPTGKK
                     KAAGAKAGCGPGTCG"
     gene            complement(1972..>2446)
                     /locus_tag="VLJ38_20500"
     CDS             complement(1972..>2446)
                     /locus_tag="VLJ38_20500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HSU41977.1"
                     /translation="ITRAGDEPDLTNTARALAWLELGHDVSVEQRDLAANANFLISSL
                     DAGHLVAAPNGDRPLRRRELESRWTVRGELSLHGVRAPVTAELNLSLVPGPDPAAPPV
                     ELLIRSRRPLVVSLNTHDIRPRDERGVPVAKDLALLGNDVGTEAKVSFELVFVPR"
BASE COUNT          390 a          817 c          875 g          364 t
ORIGIN      
        1 gagcaaggcg agcctcagcg tctccccatg cagcaggcgc tcgagcaacg ccgcggcgag
       61 cggcgaaagc tcgaggtaac gcacgtcgta ctccggatcg cgataaacga acaacgcggt
      121 cggcactcgc tcgggcggcg cgcgatcggc tgcgtcccgc gctagacgat gcaccgcgaa
      181 cgcgtagcgc gtgacccgcg ccgcctcgac gaagcagagc ccgcgttcga ggtcgagctc
      241 gccgagctca cgggcggtgc cgagctcgcg cagcgacgag atcacgatct ccagcgcttc
      301 gtgccgcgcg agctcgagcg cccagggagg cacgcgcgtg tcctcgggcc agagcggcgc
      361 gcaaaaatcg agcagctccg tcgtcacgtc gcgcaggtaa tgggtgcgcg gcccgcgttc
      421 cgccaaaaag cgctcgaaat attcgtcgaa cagcgcgccg aggcgcgcca tggtgcgcgg
      481 gatcgcaagc tctaccgcct cgcgcagcgt gtttcgcacg aggcggcggt aaacgagcaa
      541 gcgctcgaac tcggcgcgca aagcggcccg atcgtcgtcg gagaagtcgt aacgcgcgag
      601 aaactcgtcc gggtcgcgga cctcgaccgc cgggccgtgc acgagcgcgc tcacggccgc
      661 ttcaaaggcc gactgcatgg ggtcctcttt gccggagctc gtgcgccagg gccgctcgcg
      721 cgcacacggc gcggatcgcg cgcacctcgg ccagcagcac cgcgagctcg ggcacgtggt
      781 tatcgcgctc gagcagcacc ggcaacggcc ccgtgcgttc gagcgcgaag gcgagcagct
      841 cgagcacctc cggcacgacg ggcgcgccat gcgtgtcgag gacgaggccg gacggcgtcc
      901 gcgtgtgccc ggcgacgtgg atctcgacgg cgcgttcgag cggaaacgac tcgagcacgc
      961 gccgcgcgtc ctgcccctgg ttttgcgcgt tcacgtagac gttgttcacg tcgagcaaga
     1021 aacccgccgc ggtgtgctcg aacagcgtgt gcagaaagtc tccctccgag agctcgggtt
     1081 ttccgaggtg agcgtagtag gtgacgtttt cgatcgcgac gggacgcgcg agcgtttcgc
     1141 cgagctcctc caagcgagcg gcgacgcgct tggcggtgtc ggtcgcgaac ctcagcggca
     1201 ggagctcgtg aaaagcgcgt ccggagccgc tcgtgaacgc taggtgatcg gagtgccatg
     1261 gcgcgtcgag tcgcgcgact tcggtcgcca gctcggccgt gtactcatga tcgggcgcgc
     1321 gagcagcgcc gatcgaaagc gtgagtccgt gcgtgagcag cgggtatttt cggccgatac
     1381 gctcgagcgc cgccgggtaa tagcccccgc gacgcatgta gttttcgggt gagacctcga
     1441 agaacgcgat gtcctcgagc acgggcccgt cgagcacctc ctccaggaat tcccagcgca
     1501 ggccaagccc aacgccgctt ctcaacgcgc gtggcgctcc agccatcgtc agctcacgtc
     1561 gcgttcaccg gctcagccgc acgttcccgg gccacagccg gccttcgctc cggcagcttt
     1621 cttcttgccc gtcggcttcg gcgggtcggc cgggttgtcg gttgctgcag gcgtggccgg
     1681 taccgcgtcg gccttcggcg cagcgggggc cggcacggaa ggtgcggaag tggccggccc
     1741 tgggctcgcc gcggcgtcgg cggcggctgg cgccgggctc gcgggcgccg cgccagtggc
     1801 gccgggaacc tctttggccg cgaccgggct ctgcgcaggt tcgggggacg cgctcccacc
     1861 gcaagcggcg agtccgagcg cggcgagcgt actggcgaaa gcctggaaat tgagcttgtg
     1921 attcatcgaa cactcctctg acaagatcgg agccccgagt ctagctccga ctcaacgagg
     1981 gacgaagacg agttcgaagc tgaccttggc ttccgtaccc acatcgttac cgagtaacgc
     2041 gagatccttt gcgactggaa caccacgttc gtcccgaggg cgaatatcgt gggtgttcag
     2101 gctcactacg agcggccgcc gggatcggat cagaagctcg acgggcggcg ccgcggggtc
     2161 gggaccgggg acgagcgaca agttcagctc cgccgtgacg ggcgcgcgta cgccgtgcag
     2221 gctgagctcg ccgcgcacgg tccagcgact ctcgagctcg cggcggcgca agggtcggtc
     2281 gccgttcggc gccgcgacga ggtgtccggc gtcgagcgag ctgatgagaa agttcgcgtt
     2341 ggcggcgaga tcgcgctgct cgacgctcac gtcgtggccg agctcgagcc aggcgagagc
     2401 gcgcgccgtg ttcgtgaggt cgggctcgtc gcccgcgcgc gtgatg
//
LOCUS       DATIML010001188         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1695811, whole genome shotgun sequence.
ACCESSION   DATIML010001188 DATIML010000000
VERSION     DATIML010001188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695811"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..371
                     /gene="pth"
                     /locus_tag="VLJ38_20505"
     CDS             <1..371
                     /gene="pth"
                     /locus_tag="VLJ38_20505"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HSU41978.1"
                     /translation="VQAAVAFYKLPLSAVLVVHDELDLPFAEVRLKSGGGDAGNRGVR
                     SIIAQLGSPDFVRLRVGIGRPPPGFRGSAADFVLQGFAPAERAELAALVARAADAAEL
                     VASRGLAAAMNITHRQTPSS"
     gene            433..981
                     /gene="rpsF"
                     /locus_tag="VLJ38_20510"
     CDS             433..981
                     /gene="rpsF"
                     /locus_tag="VLJ38_20510"
                     /inference="COORDINATES: protein motif:HMM:TIGR00166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HSU41979.1"
                     /translation="MSQAATQQVREYETIYILKPDVTRDAQERVATRVSEVIAREKAR
                     LTSIENWGRRPLAYPVKKKKRGVYVCLKYLGGGGLVAEVERNLGVLDDVVKYQTIQLR
                     DAVDGAAVSINPEDVKFEAVDPPQPGEDEGERIEQILGFERSPERSRSDDDGFGDDDG
                     GFADDEPQSAKVETPAVAEIEK"
     gene            978..1244
                     /gene="rpsR"
                     /locus_tag="VLJ38_20515"
     CDS             978..1244
                     /gene="rpsR"
                     /locus_tag="VLJ38_20515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HSU41980.1"
                     /translation="MKEQQDRMDKDPVGNSRRTGRRRGCTFCADDAPPIDYKDPQSLR
                     YFVSERGKIVPRRISGCCAKHQRAVQLAVKHSRNIALLPFTSND"
     gene            1252..1710
                     /gene="rplI"
                     /locus_tag="VLJ38_20520"
     CDS             1252..1710
                     /gene="rplI"
                     /locus_tag="VLJ38_20520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HSU41981.1"
                     /translation="MATQLKVLLKKNVDNLGSGGEVVRVRPGFARNYLLPRGFAVPAT
                     AGNLARVEDLKRASAAEAAEALGHAKELETKLGAITVQIERASGEEDRMWGSVTSKDI
                     EEAFERVGVKLDRRRMQLPEPIKRFGSVEVPLKLHQALTASLKVEVVKKK"
BASE COUNT          356 a          645 c          678 g          325 t
ORIGIN      
        1 gcgtgcaggc cgccgtcgcg ttctacaagc tgccgctctc ggcggtgctc gtcgtgcacg
       61 acgagctcga tctcccgttc gctgaagtca ggttgaaatc gggcggcggt gacgcgggta
      121 accgcggcgt gcgttcgatc atcgcccagc tcggaagtcc cgatttcgtg cgcctgcgcg
      181 tcggaatcgg gcgtccgccg ccgggttttc gcggtagcgc cgcggatttc gtgctacagg
      241 gcttcgcccc cgcggaacgg gcggagctcg cagccctggt tgcgcgtgcc gccgacgccg
      301 cggagctcgt cgcgagccgt ggtttagcgg ccgcgatgaa catcacccac cggcagacgc
      361 cttcgagctg acgccgtggg ctccttgctc ccggaatggt tccgggggcc gctcagtcca
      421 aaaggagacc ggatgagcca agcagcgacc cagcaagtca gagaatacga gaccatttac
      481 atcctgaagc ccgacgtcac gcgtgacgcg caagagcgcg tcgccacccg cgtgagcgag
      541 gtgatcgcgc gcgagaaggc ccgcctcact tcgatcgaga actggggccg gcgcccgctc
      601 gcttacccgg tgaagaagaa gaagcgcggc gtctacgtct gcctcaagta cttgggcggc
      661 ggcggcctcg tcgcggaggt cgagcgtaac ctcggcgtgc tcgacgacgt cgtgaagtac
      721 cagacgattc agctcaggga cgctgtcgac ggcgcggccg tcagcatcaa tcccgaggac
      781 gtgaagttcg aagccgtcga tcccccgcag cccggcgagg acgagggcga gcgcatcgag
      841 cagatcctcg gcttcgagcg cagccccgag cggtcgcgtt ccgatgacga tggtttcggt
      901 gacgacgacg gcggcttcgc cgacgacgag ccgcagagcg ccaaggtcga gaccccggcc
      961 gtcgcggaga tcgaaaaatg aaagagcagc aagatcgcat ggacaaggac cccgtcggca
     1021 actcacgccg cacgggccgt cgccgcggtt gcactttctg cgccgacgac gctccgccca
     1081 tcgactacaa ggacccgcaa tccttgcgct acttcgtgag cgagcgcggc aagatcgtgc
     1141 cgcgacgtat ttccggttgc tgcgccaagc accagcgtgc cgtgcagctc gccgtcaagc
     1201 actcgcgcaa catcgcgctt ttgccgttca cctccaacga ctgagggcat cgtggcgacg
     1261 caactcaaag tgctgttgaa gaagaacgtc gataacctcg gcagcggtgg agaagtcgtg
     1321 cgcgtgcgac ccggtttcgc gcgcaactac ctcttgccgc gcggtttcgc ggtgccggct
     1381 acggccggca acctcgcccg tgtcgaggac ctcaagcgcg cttccgcggc cgaagcggcc
     1441 gaagcgctcg gacacgccaa ggagctcgag actaagctcg gcgcgatcac cgtgcagatc
     1501 gaacgcgcct cgggcgagga agatcgcatg tggggctcgg tgacgagcaa ggacatcgag
     1561 gaggcgttcg agcgtgtcgg tgtgaagctc gatcgccggc gcatgcagct gcccgagccc
     1621 atcaagcgct tcggttcggt agaggtaccg ctcaagttgc atcaagcgct cacggcttcg
     1681 ctcaaggtcg aagtcgtcaa gaagaagtaa ccgagcgcgc ggcgccgttt gcgagacatg
     1741 gtcggcgggg ttcgtgcccc gctgaccgtc gcgggccgca gacgttcgcg ttgacatggc
     1801 gcgcgtcgtg ctgctaacaa tgtgaccgtg tcgtctcgct cacgtggcga gcgactgaac
     1861 gccccggtgg tgtgcaaagc gcccccgggg cttcgttcat ttgggtgtcc agcctgggga
     1921 caagctatgg gtctcgtctt agcaagcagc ggatttcgga gaggtggtcc cagcgtccgc
     1981 gcaggggcac gacgaacctg gcgc
//
LOCUS       DATIML010001189         6275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1987885, whole genome shotgun sequence.
ACCESSION   DATIML010001189 DATIML010000000
VERSION     DATIML010001189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6275
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1987885"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VLJ38_20525"
     CDS             complement(<1..1015)
                     /locus_tag="VLJ38_20525"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter-2 (CPA2)
                     family protein"
                     /protein_id="HSU41982.1"
                     /translation="MSAESPLVRAIIYLSAAVVCVPLASRLKLGSVLGYLAAGLVIGP
                     FGLHLIKDPEQTLHFAELGVVLMLFVIGLELDPAQLVSMRRAVFGGGALQLFACAVPL
                     GAGAIALGLHWQTALVVGLALGLSSTAVSVQTMAEKNLTPTPVGRTAFAVLLFQDIAA
                     IPLLAVVPLLGVPAAGDHGSRGMAALKVLGAVAAVFVIGRFLTRPILRTLAKTGLREV
                     FSAFTLLFVLGVAFLMASAGISMALGAFLAGVLLASSEYRHALETDIEPFRGLLMGLF
                     FIAVGMSVDFGLLVHRPWFVLGLVLGFQLVKALVLRLIGKPLGVAQDERWLFAALLAQ
                     GGEF"
     gene            complement(1012..1551)
                     /gene="kefF"
                     /locus_tag="VLJ38_20530"
     CDS             complement(1012..1551)
                     /gene="kefF"
                     /locus_tag="VLJ38_20530"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: protein motif:HMM:NF002044.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HSU41983.1"
                     /translation="MVFLVFAHPYPDRSRANRQLLDAVSDLEGLEVRSLYDEYPTFDI
                     DVPREQAALTRADAVVWQHPIYWYSTPSLLKHWFDKVLLRGWAYGEGGTALRGKRCLW
                     VATTGGDEDAYRPEGMHGRPFEAYAPVVEQTAVFCGMRWEEPLILKGAHRVPEPALKA
                     YAQNYRNRIAELVRQGAAA"
     gene            1696..2409
                     /locus_tag="VLJ38_20535"
     CDS             1696..2409
                     /locus_tag="VLJ38_20535"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU41984.1"
                     /translation="MKIHGSVALVTGESRGLGRALVAALVEAGAAKVYAAARDATKLT
                     TSPRVVPLELDTRRPEQVAAAVRNAPDVTLLVNNAGVATAQNVLTTTQAAIDTDFGTN
                     VYGTLAVIKAFLPVLEQASGGATVVNVLSLAALGSFPALGGYSASKAAAYSITQALRA
                     ELKARHIAVLAALPGPIDTEMVKDLTLPKTSPADAARGVLAGIERGDEEIFPDPLAEQ
                     MSVVWNRSHKEFERAFASF"
     gene            2425..2865
                     /locus_tag="VLJ38_20540"
     CDS             2425..2865
                     /locus_tag="VLJ38_20540"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSU41985.1"
                     /translation="MTQANLSVSFMVEQSPQEVFDAVNDVRGWWSGEIEGPTDALGAE
                     FVYSYQDLHRTTQRITEWVPEKRVVWHVVRSYLSFVDDKHEWDGTDIVFDIERKGNQT
                     ELRFTHLGLVPAVACYGKCAEAWDFYITDSLRKLITTGKGEPNL"
     gene            3022..3588
                     /locus_tag="VLJ38_20545"
     CDS             3022..3588
                     /locus_tag="VLJ38_20545"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSU41986.1"
                     /translation="MRPSKEGRRTRRAGTRVEVQNGPFAEDGKALGAFYWLEAESADE
                     AAQLALACPTLASDAIDVRPLMKGFVEHDKEAKPGKVFAFVVLGKAETEEAWVEVMDR
                     IDAETAPAHGDAFLGGVRLESPKRGRRVLTQGERRALSDGPFLESKEVIGGVFFLRLT
                     SVEEAVAWAERTRFVVHGALEIRELWRS"
     gene            3576..4772
                     /locus_tag="VLJ38_20550"
     CDS             3576..4772
                     /locus_tag="VLJ38_20550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU41987.1"
                     /translation="MAELGALIESTVRRERGRIVGGLLRLYGSVGAAEEAFQEAALAA
                     VEAWRQEVPDNPGAWLMTAAKNSANDALRHQAIVDAKAPLLAAGATDVHETIDTVSDD
                     YLRLIFTCCHPELSLDNRIALTLKVVAGFSSAEIARAFVSTEATVSQRLLRAKQLLAQ
                     KRVAYAAPERQELGARLAAVLGVVYAMFNEGHTAQRGELMRLDLQAEALRLGRLLCDL
                     VPCEPEAFGLVALMAFSAARAHTRVDSQGLPILLADQDRSAWNREGLREGLMALARAR
                     SLGGRGPYVLQAELAAVHVTAESWERTDWTAIVALYDALLALAPSPIVALNRAVGVAQ
                     RDGPAAGLQALVELERPLADYHLFYATRADFLEHVGRDPRPDLERALSLVTNDSERRL
                     LERRLG"
     gene            5047..5883
                     /locus_tag="VLJ38_20555"
     CDS             5047..5883
                     /locus_tag="VLJ38_20555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41988.1"
                     /translation="MASVGGSKSSGGTPSVGGTGGTTLGVGGTTSVGGTDSGSGGFAG
                     DGCIDGAGVFHAVGSTYLAPDGCNTCTCTQTGNACTNGICEADVCDALASEFNDVATR
                     VMRCTSGVDTCGEVAMGLSCACPFYVTDAAELARISAEYAMQGCPMVACSCTSLYPEH
                     VCSRDGYCAALAPGGAGTGSSGFGGMAGTTAAAGFGGVAGAFSTGGLGGLSGGPPSAG
                     FGGSGFAGSAPSAGFGGFAGAVPTAGFGGFAAGGAPAAGFGGLDGASGSSSTASGGFA
                     TD"
     gene            5893..>6275
                     /locus_tag="VLJ38_20560"
     CDS             5893..>6275
                     /locus_tag="VLJ38_20560"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41989.1"
                     /translation="MITHPDKLLFPADGITKGELARYYESVQAVLLPQLRDRPVTLER
                     FPAGIAQKGFIQKDIGRGAPEWLERVEVPKKGGKTTYALVNDERALLWLANLNTITPH
                     VWVSRVPELDWPDLCVFDLDPSRED"
BASE COUNT         1079 a         1990 c         2249 g          957 t
ORIGIN      
        1 cgaactcgcc gccttgggcc agcagcgccg cgaacagcca gcgttcgtcc tgggcgacgc
       61 cgagcggctt gccgatcagg cgcagcacca gcgctttgac gagctgaaag ccgagcacga
      121 ggccgagcac gaaccaggga cgatgcacga gtaagccgaa atcgacgctc atgccgacgg
      181 cgatgaagaa caaacccatc aagaggccgc gaaaaggctc gatgtccgtc tcgagcgcgt
      241 gccggtactc cgagctcgcg agcaaaacgc ccgcgaggaa cgcgccgagc gccatcgaaa
      301 tgcccgcgct cgccatcaag aaggccacgc cgagcacgaa gagcaacgtg aacgcgctga
      361 acacctcgcg cagacccgtc ttggcgagcg tgcgcaagat cggacgcgtc agaaagcggc
      421 cgatcacgaa cacggccgcg acggcgccga gcaccttgag cgccgccata ccgcgcgaac
      481 cgtggtcgcc cgcggcgggc acgccgagca gcgggacgac ggcgagtaac ggaatcgcgg
      541 cgatgtcttg aaacaagagg acggcaaacg ccgtgcgccc gacgggagtc ggcgtgaggt
      601 tcttctccgc catcgtttgc acgctgacgg ccgttgacga aagtccgagc gcgaggccca
      661 cgacgagcgc tgtctgccag tgcaacccga gcgcgatggc gcccgctccg aggggcaccg
      721 cgcaggcgaa tagctgcagc gcgccacccc cgaagacggc ccgacgcatc gagacgagct
      781 gcgccggatc gagctcgagg ccgatcacga agagcatgag cacgacgccg agctcggcaa
      841 aatgcagcgt ttgttcggga tctttgatca ggtgcaagcc gaacgggccg atcacgagcc
      901 cggcggcgag gtagccgagc acggagccga gcttgagccg actcgcgagc ggcacgcaga
      961 cgacggcggc gctcaagtaa atgatggcgc gcacgagcgg tgactcggca ctcatgctgc
     1021 tgctccctgg cgcacgagct cggcgattcg gttgcggtaa ttttgagcgt acgctttgag
     1081 cgccggctcg ggaacgcggt gggcgccttt gaggatgagc ggctcttccc agcgcatgcc
     1141 gcagaagacg gcggtctgct cgacgactgg cgcgtacgct tcgaacggac ggccgtgcat
     1201 cccttcggga cgataggcgt cctcgtcgcc gcccgtcgtc gcgacccaga ggcagcgttt
     1261 gccgcggagt gccgtgccgc cctcgccgta cgcccagccg cggagcagca ctttgtcgaa
     1321 ccagtgcttc aagaggctcg gcgtcgaata ccagtagatc gggtgttgcc agaccacggc
     1381 gtcggcacgc gtgagcgccg cctgctcgcg cggcacgtcg atgtcgaacg tcgggtactc
     1441 gtcgtagagc gagcgcacct cgagcccttc gagatcggag acggcgtcga gcaactgccg
     1501 gttcgcgcgc gagcgatccg ggtaggggtg agcgaacacc aagaagacca tcgctccccg
     1561 cctagcatcg ctcgggttgc gccatcgagc cggagcgggg acgtcccggt ccgtgggccg
     1621 aaaaatgtgt cccgcgcgca cgatgtagga tccgagcggc gtggatcgtc gcaggggtga
     1681 aagcgaggtt cacccatgaa aattcacgga tcagtagcgc tggttaccgg cgaaagtcgc
     1741 ggactcggcc gggcgctcgt ggcggcgctc gtcgaagccg gtgctgccaa agtgtacgcc
     1801 gccgcgcgcg acgcgacgaa gcttacgacg tcaccacgcg tcgttccgct cgagctcgac
     1861 acgcgccggc ccgagcaggt ggcggcagcc gtccgcaacg cgcccgacgt gacgctactc
     1921 gtcaacaacg ccggcgtcgc gaccgcccag aacgtgctga cgacgaccca ggccgcgatc
     1981 gacaccgatt tcggcacgaa cgtttacggc acgctcgccg tgatcaaagc gttcttgccg
     2041 gtgctcgagc aagcgagcgg cggcgcgacg gtcgtcaacg tgctgtcgct cgcggcgctc
     2101 gggagtttcc ccgcgctcgg cggctattcg gcgtcgaagg cggctgcgta ttcgatcaca
     2161 caagcgctgc gcgccgagct caaggcccgg cacatcgccg tgctcgccgc gctgcccggg
     2221 cccatcgata cggagatggt caaggacctc acgctaccca agacaagccc ggcggacgca
     2281 gcgcgcggtg tgctcgcggg catcgaacgt ggcgacgagg agatcttccc ggatcccttg
     2341 gcagagcaga tgagtgtcgt ctggaatcgc agtcacaagg aattcgagcg cgcgttcgcg
     2401 agcttttgag caggaggaga agtcatgaca caagccaatc tgagcgtgag tttcatggtc
     2461 gaacaatccc cgcaggaggt cttcgatgcc gtcaatgacg tgcgcggctg gtggtcgggg
     2521 gagatcgagg gaccgacgga cgcgctcggc gccgagttcg tctacagcta ccaggacctc
     2581 caccgcacga cgcagaggat caccgaatgg gtgccggaaa agcgtgttgt ttggcacgtt
     2641 gtccgaagtt acctgagttt cgtcgacgac aagcacgagt gggacggcac ggacatcgtc
     2701 ttcgacatcg aacggaaggg caaccagacc gagctccgct tcacgcacct cggcctcgtg
     2761 ccggccgtcg cctgctacgg caagtgcgcc gaggcgtggg acttctacat cacggacagc
     2821 ttgcgtaagc tcatcaccac cggcaaaggc gagccgaacc tttaactacg cgggtgacat
     2881 ggccgactac atgctgatgg tgctcgaaga cgagaaagca catgcgtcgc agccgccgca
     2941 cgtgatggcg gagctcatcg agaagcgtag agcgttcatc gacgggctcc gccgcacggg
     3001 acgactcagg gacagcggcg gttgcggccg agcaaggaag ggagacggac gcggcgcgcc
     3061 gggacgcgag tcgaagttca gaacggccct ttcgccgaag acggcaaggc gctcggcgcg
     3121 ttctactggc tcgaggcgga gagcgccgac gaagccgcgc agcttgcctt ggcctgcccg
     3181 acgctggcgt ccgacgcgat cgacgtgcgc ccgctcatga agggcttcgt cgagcacgac
     3241 aaggaagcaa agccgggcaa ggtcttcgcg ttcgtcgtgc tcggcaaggc ggagaccgag
     3301 gaagcgtggg tcgaggtcat ggatcggatc gacgcggaaa cggcgcctgc gcacggcgac
     3361 gcgtttctcg gcggtgttcg gctcgaatcg cccaagcgcg gccggcgcgt gctgacgcag
     3421 ggcgagcggc gcgcgctgtc ggacggcccg tttctcgaga gcaaggaggt catcggcggc
     3481 gtgttcttcc tgcgcctgac gagcgtcgaa gaagcggtgg cttgggcgga acggacgagg
     3541 ttcgtcgtgc acggcgcgct cgaaatccgc gagctatggc ggagctaggc gctctcatcg
     3601 agagcacggt gcgtcgcgag cgcgggcgca tcgtgggcgg actcctgcgg ctctatggca
     3661 gtgtcggcgc ggcggaggaa gcatttcaag aggccgcgct cgcggcggta gaagcttggc
     3721 gccaggaggt gcccgacaat ccgggagcgt ggctcatgac ggcggcgaag aacagcgcga
     3781 acgacgcgct ccggcaccag gccatcgtgg acgcgaaggc gccgctgctc gcggcgggcg
     3841 cgacggacgt ccacgagacc atcgacacgg tgagcgacga ttatttgcgg ctcatcttca
     3901 cctgctgtca ccccgagctc tcgctcgaca accggatcgc gctgacgctc aaggtggttg
     3961 cggggttttc gagcgcggaa atcgcgcggg cgttcgtgag cacggaggcc accgtgtcgc
     4021 agcgtttgtt gcgcgcgaag cagctgctcg cgcagaagcg cgtcgcgtat gccgctcccg
     4081 agcggcagga gctcggcgcg cgcctcgccg ctgtgctcgg cgtcgtttac gcgatgttca
     4141 acgagggcca cacggcgcag cgcggcgagc tcatgcgact cgatttgcag gccgaggcgc
     4201 tgcgactcgg gcgactcctc tgcgatctcg tgccgtgcga gccggaggcg ttcgggctcg
     4261 tcgcgctgat ggcgttcagc gcggcgcgcg cgcacacacg cgtggacagc caagggctgc
     4321 cgattttact cgccgaccag gatcgttcag cgtggaaccg tgagggcttg cgcgaagggc
     4381 tcatggcgct cgcgcgtgcg cgttcgctcg gggggcgcgg gccgtacgtc ttgcaagcgg
     4441 agctcgcggc cgttcatgtg acggcggaga gctgggagcg caccgactgg acggcgatcg
     4501 tcgccctgta cgacgcgctc ctcgcgcttg cgccttcacc catcgtggcg ttgaaccgcg
     4561 ccgtcggtgt cgctcagcgt gacggcccag ccgcgggtct tcaggcgctc gtggagctcg
     4621 agcgtccgct cgccgactac cacctgtttt acgcgacgcg cgccgacttc ctcgagcacg
     4681 tggggcggga tccgcgaccg gacctcgagc gagcgctgtc gctcgtgacg aacgacagcg
     4741 agcggcggct actcgagcgg cgactgggat agaaagggga gaatggggtc gcaggctgcg
     4801 ggaaaccgcg gcggggtgtc taggggcccg tgccggatta gactgagctc tcggtgggtg
     4861 tttttccggc gataggcaat gttgatcatg accgacggac gcgagcggca gggatggata
     4921 gcggtagcgg tgctcctcat gagcggggcg gcctgtggcg gtcgttcgac acaagagttg
     4981 gatcctaggg ccggggacgg tgggtccagg tcaggcgtcg gcggaacgaa gtcgaccggg
     5041 gggacgatgg cgagcgtcgg tgggtcgaag tcgagcggcg ggacgccgag cgtcggcggg
     5101 acggggggca cgacgctcgg cgtgggcggc acgacgagtg tcggcggcac cgattccggc
     5161 agtggtggct tcgcgggcga cggatgcatc gacggcgcgg gcgtgttcca cgcagtcggc
     5221 agcacgtacc tggcgcccga tggctgcaac acctgtactt gcacccagac cgggaatgca
     5281 tgcacgaacg gcatctgtga ggcggacgtc tgcgacgcac tcgcgtcgga gttcaacgac
     5341 gttgccacgc gcgtcatgcg ctgcacgtcg ggcgtcgaca cgtgcggtga ggtcgctatg
     5401 gggctcagct gcgcgtgtcc gttttacgtg actgacgccg ccgagctcgc tcgcatcagt
     5461 gcagaatacg ccatgcaagg ctgccccatg gtcgcgtgct cgtgcacctc gctctacccc
     5521 gagcacgtct gcagccgcga cggttattgc gcggcgcttg cccctggcgg tgccggcacg
     5581 ggttccagcg ggttcggcgg catggcgggc acgacggcgg cggcgggatt cggcggtgtc
     5641 gccggtgcct tttcgacggg cgggctcggg ggcctcagcg ggggcccgcc cagcgcaggc
     5701 ttcgggggct ccggctttgc gggcagtgcg ccgagcgccg gcttcggtgg cttcgcgggc
     5761 gctgtgccga ctgccggctt cggtggcttc gcggccggcg gcgcgccggc tgccgggttt
     5821 ggtggactcg acggcgcgtc cggctcgagc tcgacggctt caggcggctt cgctaccgat
     5881 tagcgagcgt ccgtgatcac gcatcccgac aagctgctct ttcccgccga cggcatcacg
     5941 aaaggcgagc ttgctcgcta ttacgagagc gtccaagccg tgctgctccc gcagctgcga
     6001 gatcgtcccg tcacgctcga gcgtttccct gcgggcatcg cgcagaaggg cttcattcaa
     6061 aaggacatcg gccgcggcgc gcccgagtgg ctcgagcgcg tcgaggtccc gaaaaagggc
     6121 ggcaagacca cgtacgccct cgtgaacgac gagcgcgcgc tcctctggct cgcgaacctg
     6181 aataccatca cgccgcacgt ttgggtttcg cgcgtgcccg agctcgactg gccggacctg
     6241 tgtgtgttcg atctcgatcc gtcgcgggaa gacga
//
LOCUS       DATIML010001190         2252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4293682, whole genome shotgun sequence.
ACCESSION   DATIML010001190 DATIML010000000
VERSION     DATIML010001190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4293682"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VLJ38_20565"
     CDS             <1..459
                     /locus_tag="VLJ38_20565"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HSU41990.1"
                     /translation="VHPTAPEPSRSERRIEQSYGGRLGKAIEPVFAPLGFDWKIDVGI
                     IGAFAAREVFISTLGLVYGVGDTDDQALPLREKLRHETLGGKVRYTPLVGLSLLVFFA
                     LSCQCMSTLAVVRKETQTLKWPAFLFAYMTTLAYTLSFLVYQCGKLLGFG"
     gene            642..1124
                     /locus_tag="VLJ38_20570"
     CDS             642..1124
                     /locus_tag="VLJ38_20570"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HSU41991.1"
                     /translation="MDWGLRRIPPFVGGRAITAALRLAGARVASSTCFWGMPTLTGQG
                     DIASRLQIGELSGLNFGCFFELDAEVRLEDHVSVGHQVMFLTRTRDPKHRDRRGTPAA
                     PKPIRVGAGSWLGARAVVLPGVTIGAGSVIGASVVVRDDVPPNTLLMGSRKLSLAKWR
                     "
     gene            1153..1458
                     /locus_tag="VLJ38_20575"
     CDS             1153..1458
                     /locus_tag="VLJ38_20575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41992.1"
                     /translation="MIARADAYEIILKSLEEVFAQCGMPAPDTVGDETVLVGNDAVLD
                     SLGVVQLIVEVEQRVEETHGVSVTLANDKAMSQRNSPFRTVGVLADHVVATALEAAS"
     gene            1455..2165
                     /locus_tag="VLJ38_20580"
     CDS             1455..2165
                     /locus_tag="VLJ38_20580"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU41993.1"
                     /translation="MTPSERPVLLVTGSRKGIGRYLAEHYLKQGYFVEGCSRGDGDLR
                     DPSYHHHQVDVADERAVRLMVADITKRHGRIDVVLNNAAIASMNHVLLTPAKSANRML
                     EVNVTGTMLVCRDAAKVMMRRRYGRIVNFTTIVAPIALAGEAVYAASKSAVVTFTRIL
                     AFELGQWGITCNSFGATPIMTDMIRGVPQDKIDAVVNGLAVKRLGTHEDCANVCDFFI
                     NPASDNITGQVIYLGGVT"
BASE COUNT          378 a          756 c          720 g          398 t
ORIGIN      
        1 gtccacccga ccgctcccga gccctcgcgt tccgagcgcc gcatcgaaca gagctatggc
       61 ggtcgcctcg gcaaagccat cgagcccgtg ttcgcgccgc tcggcttcga ttggaaaatc
      121 gacgtgggca tcatcggcgc cttcgccgcg cgcgaggtct tcatctcgac gctcggcttg
      181 gtctacggcg tgggcgacac cgatgaccaa gcgctgccgc tgcgcgaaaa gctccgtcac
      241 gaaacgctgg gcggcaaggt gcgctacacg ccgctcgtcg ggctctcgct gctcgtgttc
      301 ttcgcgctct cctgccagtg catgagcacc ctcgccgtcg tgcgcaagga gacccaaacc
      361 ctcaaatggc cggcgttcct cttcgcctac atgacgacac tcgcctacac gctgagcttc
      421 ctcgtgtacc agtgcggtaa gctcctcggt tttggctgac agggccgcca cacccacggc
      481 tgcaaggcga gagcgggcgc taatccgccg ataatatcgg ttgggcgagt acaattaatc
      541 ttcacggcgc tagacggact ggcgggaacc ggctaactct agcgctgcgg tccatggcaa
      601 tcgccggcga aaagcgcctc ccgagacttc ctctttcgtg cgtggattgg ggcttgcgcc
      661 gcatcccgcc tttcgtcggc ggtcgcgcga tcacggcggc gctccgactg gccggggcgc
      721 gtgtggcgag ttcgacctgt ttttggggca tgccgacgct gacgggccaa ggtgacatcg
      781 cgtcccggct ccagattggc gagctcagtg gcctcaattt cggctgtttt ttcgagctcg
      841 acgccgaagt ccggctcgaa gatcacgtct cggtcggcca ccaggtgatg tttctcaccc
      901 gcacgcggga cccgaagcat cgcgatcggc gcggcacgcc cgcggcgccg aagcccattc
      961 gcgtcggcgc cggcagctgg ctcggggcgc gcgccgtcgt gctcccgggc gtgaccatcg
     1021 gcgccgggtc ggtcatcggc gcgagcgtgg tcgtccgcga cgacgtgccg ccgaacacgc
     1081 tgctcatggg cagccgcaag ttgtcactgg caaaatggcg ttgacggggt ggagagagct
     1141 cgaacgatat tcatgatcgc gcgcgcggac gcatacgaaa tcattctcaa gagcttagaa
     1201 gaggtgttcg cgcagtgcgg catgcccgcg cccgacacgg tcggcgacga gacggtgctc
     1261 gtaggtaacg acgccgtgct cgattcgctc ggtgtcgtgc agctcatcgt ggaggtcgaa
     1321 cagcgcgtgg aagaaacgca cggcgtttcg gtgacgctcg ccaacgacaa ggccatgtcc
     1381 cagcgcaaca gccccttccg caccgtcggc gtgctcgccg accacgtcgt cgcgacggcg
     1441 ctcgaggccg cctcgtgacg ccgagcgagc gccccgtgtt gctcgtgacc gggtcgcgca
     1501 agggtatcgg gcgctacctc gcggagcact atctcaagca gggctacttc gtcgagggtt
     1561 gcagccgtgg cgacggcgac ctccgcgatc cgagctatca ccaccatcag gtcgacgtcg
     1621 ccgatgaacg ggcagtgcgt ctgatggtcg ccgacatcac gaagcgccac ggccgcatcg
     1681 acgtcgtgct caacaacgcc gcgatcgcca gcatgaatca cgtgctgctc acgccggcca
     1741 agagcgcgaa tcgcatgctc gaagtcaacg tcacgggcac gatgctcgtg tgtcgcgacg
     1801 cggccaaagt gatgatgcgc cgccgttacg gccgtatcgt caacttcacg accatcgtcg
     1861 cgcccatcgc gctcgcgggt gaagccgtct acgcggcttc gaagagcgcg gtcgtcacct
     1921 tcacgcgcat tctcgcgttc gagctcggcc agtggggcat cacctgcaat tccttcggcg
     1981 cgacgccgat catgaccgac atgatacgcg gcgtgccgca ggacaagatc gacgccgtcg
     2041 tgaacgggct tgccgtcaag cggctgggca cgcacgaaga ctgcgcgaac gtctgtgatt
     2101 tcttcatcaa cccggcgagc gacaacatca cggggcaagt catctatctc ggcggcgtta
     2161 cctgagccca tctcgccgat gaacgccgct tggtttctcg cacgcttgct cgagtggggc
     2221 gacgcgacgg cgctcgtctc gcacgggcgc cg
//
LOCUS       DATIML010001191         4995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4581173, whole genome shotgun sequence.
ACCESSION   DATIML010001191 DATIML010000000
VERSION     DATIML010001191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4995
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4581173"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1227)
                     /locus_tag="VLJ38_20585"
     CDS             complement(<1..1227)
                     /locus_tag="VLJ38_20585"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HSU41994.1"
                     /translation="MNVRVSAKACAAAVALVLAATSARAQGEARDASKHAAEAREDVT
                     LAVGETTVISARDVRNYSLAVAGIVEIKLTGDASQFVLVGRKQGSTTLLLIKNDNSQV
                     TLNVTVFPRPPALVERELAELLAGLNVQSRRVGAQIVLDGAVASEADLRRVQQIAALY
                     PDQVTSLVQVAQSGTLSGASKAQYLVRIDFYFVQYDKESSYALGVGWPESIASTATAT
                     LEYDFLANATRSATATIAAQPLPRLDIASRHGWAKVLKQATVITNNDAEAHFSNGGEQ
                     NFSVNTGLTIGVERITFGTELTVLPHFDPDQRELSLRVVADVSDLTASVSGTQLPGRS
                     TSKLTTVVNLKLGQSLVLSGIRTQSLTHSVAGLPGLSEIPLFGFLFGSHSQSKLETEG
                     AIFVVPSVVETVPTAGA"
     gene            complement(1224..1994)
                     /gene="cpaB"
                     /locus_tag="VLJ38_20590"
     CDS             complement(1224..1994)
                     /gene="cpaB"
                     /locus_tag="VLJ38_20590"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HSU41995.1"
                     /translation="MKQKPVLIGVALALLGVALQAVYMHRFEEQASGGAKIELLVAAQ
                     PIERGKKVTAEMLAVRAVPQAYVDDRAVRAVDRDKVLNLRAASKVPVLQTLAWTDLIA
                     TTDDERDLSSLVQPGNRALPIRVQFEEALQLIRPGDFVDVLGIDADAREASVLLQRVL
                     VLAAGLDTSVERTVDKKPGYRASLLTVSVSLQEAQLLTLAQSVGRLMVVVRGLGDPRV
                     FDSPPDVGRSELFDSTARQAVQRSSRRPLPLSLAGVVP"
     gene            complement(2018..2575)
                     /locus_tag="VLJ38_20595"
     CDS             complement(2018..2575)
                     /locus_tag="VLJ38_20595"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HSU41996.1"
                     /translation="MLVFLLAAVVVSAIAAICDLRTGRIPNWLTFGTLGLAVAGHFVR
                     GALLGGLGEAGAQAALSLAGAIFCALSPGVLYLKHGMGGGDLKLFAALGALCHPMLGI
                     ELELYAFALTVLVVPGKLVYEGRLLRVLGSSYALVRNAFLPASKRRTLPPDAMSWVPL
                     GPAVFGGALVTLALHHAAGALSRLL"
     gene            complement(2606..2791)
                     /locus_tag="VLJ38_20600"
     CDS             complement(2606..2791)
                     /locus_tag="VLJ38_20600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41997.1"
                     /translation="MKQRLTHLLHDDRGNLVEYLIVIGLVALLAIGAFQIFGTSVSDK
                     IKSQSKAVDTITDTAVK"
     gene            complement(2826..3044)
                     /locus_tag="VLJ38_20605"
     CDS             complement(2826..3044)
                     /locus_tag="VLJ38_20605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41998.1"
                     /translation="MHTAIRFSQTSLEVASAFMRGLRTDTRGSILLEYSVLIGSIALA
                     GALGLVAVGIALVRSFDFARALLLSPIP"
     gene            3378..3965
                     /locus_tag="VLJ38_20610"
     CDS             3378..3965
                     /locus_tag="VLJ38_20610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU41999.1"
                     /translation="MTRLSKPHDDRGAVFVEFLIAFMPVYVFFLCLVQLSLLFTVRLV
                     TEHAAVNAARAAAVVIGDDPQRYGGEHMHEIIEGRGERYAAVRNAALLTLAPFVLNGT
                     VLGVDVLFPPPDKPGADGRKGPLHFLPMGTHDVEKVRVRVEVDTACRIGFANRVTCPL
                     LSLGSRPRVHVQLDLPTILVRAEAVYPYQGARYAY"
     gene            3955..>4995
                     /locus_tag="VLJ38_20615"
     CDS             3955..>4995
                     /locus_tag="VLJ38_20615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42000.1"
                     /translation="MRIDTGTRAECGLVRDERGAVLVLGVFMCACMVGALWYLAGIGD
                     ALVYRERLQEGTDAAAFSAAALHARGMNLIVLLNLVMACILAVRVTLKAVQAGLTLAA
                     FFCAVFPPLAEFEPTCLEGVKLTEDAIRVTRQPINQTLKALSRTQNVIKTLVPAAAAA
                     GAFQVGEKYRPIVREASAANPTHLTGLPVEEGSVDRLCDEAGESVVGLLAWALPVSLP
                     DMAVNKIRSVIGKSVRTGGAYFCELGSGPATPPDFSDEIGSAAKEGCDRQKKDKQSAL
                     DASEAKYEGACRNYGTSCDATTPPSASLSADAERELSLLKSARDSDESAVDAFDGDQC
                     VKQQSEQAKQKMK"
BASE COUNT          858 a         1647 c         1691 g          799 t
ORIGIN      
        1 ggctcccgct gtcggcaccg tctcgaccac gctcggcacg acgaaaatcg cgccctccgt
       61 ttccagcttc gattgcgagt gcgagccgaa caagaagccg aagagtggaa tctcgctgag
      121 ccccggcagc cccgcgaccg agtgcgtgag ggattgtgtg cgaatacccg agagtacgag
      181 ggattgaccg agcttcagat tgacgacggt cgtaagcttc gaagtcgagc gtccgggcag
      241 ctgcgtgccg ctgaccgagg ccgtgagatc gctcacgtcg gcgaccacgc gcaggctgag
      301 ctcgcgctga tcggggtcga agtgaggcag tacggtgagc tcggtgccga aggtgatgcg
      361 ctcgacgccg atggtaagtc cggtattgac cgagaaattc tgctcgccgc cgttcgagaa
      421 gtgcgcctcg gcgtcgttgt tcgtgatgac ggtcgcttgc ttcagcacct tggcccaacc
      481 gtggcgcgac gcgatgtcga ggcgcggcaa cggctgggcc gcgatcgtgg cggtcgccga
      541 acgcgtggcg ttggcgagaa agtcgtactc gagcgtggcc gtggccgtgc tcgctatcga
      601 ctccggccaa ccgacgccga gcgcgtagct cgactccttg tcgtactgca cgaagtagaa
      661 atcgatgcgc acgaggtact gcgccttgga cgcgcccgac aaggtgccgc tctgcgcgac
      721 ctgcacgagc gacgtcacct ggtcgggata gagcgcggcg atctgctgca cgcgccgcag
      781 atcggcttcg ctcgccaccg cgccgtcgag cacgatctgg gcgcccacgc ggcgtgactg
      841 cacgttgagg cccgcgagta gctcggcgag ctcgcgttcg acgagcgcgg gcggacgcgg
      901 gaacacggtg acgttgagcg tgacttggct gttgtcgttc ttgatcaaga gtagcgtcgt
      961 cgaaccctgt ttgcgtccga ccagcacgaa ttgactggca tcgcccgtga gcttgatttc
     1021 gacgatgccc gcgacggcga gcgagtagtt gcgtacgtcg cgcgcggaga tgacggtcgt
     1081 ttcaccgacc gcgagcgtca cgtcctcgcg cgcctcggct gcatgcttgg aagcatcgcg
     1141 tgcctcgcct tgggctcggg cgctcgtcgc cgcgagcacg agggcgacgg ccgcggcgca
     1201 cgctttcgcc gagacgcgca cgttcacggc acgactcccg ccaagctgag cggcaggggc
     1261 cgccggctcg agcgctgcac ggcttgccgc gccgtcgaat cgaagagctc ggagcgcccc
     1321 acgtcgggcg gcgaatcgaa cacgcgcgga tcgccgaggc cgcgcaccac gaccatcagg
     1381 cgcccgaccg actgagcgag cgtcaagagc tgcgcctcct gcaggctgac gctcacggtg
     1441 agcaggctcg cgcgatagcc cggcttcttg tcgaccgtgc gctcgacgct cgtgtcgagt
     1501 ccggcggcga gcacgagcac gcgctgcaaa aggacgctcg cctcgcgcgc gtcggcgtcg
     1561 atcccgagca cgtcgacgaa atctccgggg cgaatcagct gcagcgcttc ctcgaactgc
     1621 acgcggatcg gcagcgcgcg gttgcccggc tgcacgagcg agctcaaatc gcgctcgtcg
     1681 tccgtggtgg caatgagatc ggtccaggcg agcgtctgga ggacgggcac tttggaggcg
     1741 gcgcgtagat tcagcacctt gtcgcgatcg acggcccgca cggcgcggtc gtccacgtac
     1801 gcttgcggga cggcgcgtac cgcgagcatc tcggccgtca ctttcttgcc acgctcgatc
     1861 ggctgggccg cgacgagcag ctcgatcttc gcgccgcccg aagcctgttc ctcgaagcgg
     1921 tgcatgtaga cggcctggag cgcgacgccc agcagggcca gcgcgacacc aatcaacacg
     1981 ggtttctgtt tcatgctgga gctccgtgac tgcggcttca gagcaggcgc gagagcgcgc
     2041 ccgcggcgtg atgcagcgcg agcgtcacga gcgcgccgcc gaacacggcc ggtccgagcg
     2101 gcacccaact catggcgtcc ggcgggagcg tccgtcgttt actggcaggt aagaatgcat
     2161 tgcgcacgag cgcgtaggag ctaccgagca cgcgcagcag ccgtccctcg taaacgagct
     2221 ttccgggaac gacgagcacg gtcagcgcga acgcatagag ctcgagctcg atgccgagca
     2281 tgggatggca gagagcaccg agcgccgcga agagcttcag atcgccgccc cccataccgt
     2341 gcttcaagta gagaacaccc ggcgaaagcg cgcagaagat cgcccccgcg agcgagagcg
     2401 ccgcctgcgc gccggcctct ccgagcccgc cgagcagagc gccgcgcacg aagtgcccgg
     2461 cgacggcgag cccaagcgtg ccgaacgtca gccagttcgg aatccgtccc gtgcgcagat
     2521 cgcaaatcgc cgcgattgcg gaaaccacga ctgcagcgag caaaaacacg agcatgagac
     2581 tctcctcttt cgccggggtt cagggttact tcacggccgt gtcggtgatg gtatccaccg
     2641 ctttcgactg gctcttgatc ttgtcgctga ccgaggtgcc gaagatttgg aacgcgccga
     2701 tcgcgagcag cgcgacgagc ccaatcacga tcaggtactc gacgaggttg ccgcgatcat
     2761 cgtggagcag gtgagtgaga cgttgtttca tacaggtact ccgctaggtg atggttgatg
     2821 gcgaattagg ggatcggact cagcaagagc gcgcgagcga agtcgaagct ccgcacgagc
     2881 gcgatgccga cggcaacgag cccgagcgcc cccgcgagcg cgatcgagcc gattaacacg
     2941 gagtactcga gcagaatcga accgcgcgta tccgttcgca ggccgcgcat gaacgcgctc
     3001 gcgacttcga ggctcgtttg cgagaagcgt atcgccgtgt gcatgccggc gagcactgca
     3061 agagctttgc caagctcacg cgacgctggc ctccacgcga gtggcggtgt catcgccggt
     3121 tttgtgccgg tttcccggtg cgacgacgcc cggcgcgctc gaccgccggc caggtgccaa
     3181 ccgccggttg gcagcgctcg gttgcgcgcc acctcggact tggcgctcgg aaccgacgtg
     3241 caggaccttc gtcccgtgcg cgcggcccag cgggaggcgg cgttcactcg ctatctacgc
     3301 tcggccgccg ccgaagtttc gggcagcgcg atcgagcgag cgccctggta cgcgatctgc
     3361 actcagtcgg cgcgagcatg actcgattga gcaagcctca cgacgatcgc ggcgcggtgt
     3421 tcgtcgaatt cttgatcgcg ttcatgccgg tgtacgtctt cttcctctgt ttggtgcaat
     3481 tgagtctctt gttcacggtc aggctcgtga ccgagcacgc cgccgtcaac gccgcgcgcg
     3541 cggcggccgt cgtgatcggc gacgacccgc agcgctacgg cggcgagcac atgcacgaaa
     3601 tcatcgaggg gcgcggggaa cgttacgccg ccgttcgtaa cgccgcgctc ttgacgctcg
     3661 cgccgttcgt cctgaacggc acggtgctcg gcgtcgacgt gctgttcccg ccgccggaca
     3721 agccgggcgc cgacggccgc aaaggtccgc tgcatttcct gcccatgggc acccacgacg
     3781 tcgagaaggt gcgcgtccgg gtcgaagtcg acaccgcgtg tcgtatcggc ttcgccaatc
     3841 gcgtcacctg cccgctcttg agcctcggct cgcgaccgcg cgtgcacgta cagctcgacc
     3901 tgccgaccat cctcgtgcgc gccgaagccg tgtatccgta ccaaggagcg cgttatgcgt
     3961 attgatactg ggacacgcgc cgagtgcggt ctcgtacgcg acgagcgcgg cgccgtgctc
     4021 gtgctcggcg tcttcatgtg cgcctgcatg gtgggcgcgc tctggtacct ggccggcatc
     4081 ggcgacgccc tcgtctaccg cgagcggctg caagagggca cggacgcggc ggcgttcagc
     4141 gcggcggccc tgcatgcgcg cggcatgaac ctgatcgtgc tcttgaacct ggtgatggcc
     4201 tgcattctgg ccgtgcgcgt gacgctgaag gccgtgcaag cgggcctgac gctcgccgca
     4261 ttcttctgcg ccgtcttccc gccgctcgcc gagttcgaac cgacttgtct cgagggcgtg
     4321 aagctcacgg aggacgcgat ccgcgtgacg cgccagccga tcaatcaaac gttgaaggcg
     4381 ctgagccgca cgcaaaacgt gatcaagacg ctcgtgcccg cggccgcggc ggcgggcgca
     4441 ttccaagtgg gcgagaaata ccgcccgatc gtgcgcgagg ccagcgcggc caatcccact
     4501 cacctcacgg ggctccccgt cgaggaaggc agcgtcgatc gcctgtgcga cgaagccggc
     4561 gaaagcgtgg tcggtctctt ggcgtgggcc ctgcccgtgt cgctgcccga catggcggtg
     4621 aacaagatcc gctccgtgat cggcaaaagc gtgcgcacgg gcggcgcgta tttctgcgag
     4681 ctcggcagcg gccccgccac cccgcccgat ttcagcgacg agatcggctc ggcggcgaag
     4741 gaaggctgcg atcgtcaaaa gaaggacaag cagagcgcgc tcgacgcaag tgaagcgaag
     4801 tacgagggcg catgccgcaa ctacggcacg agctgcgacg ccaccacacc gccctcggcg
     4861 tccctttcgg cggacgccga acgcgagctg tcgctcttga agtcggcgcg cgacagcgac
     4921 gagtcggcgg tcgacgcctt cgatggcgac cagtgcgtca aacaacagag cgagcaagcc
     4981 aagcaaaaga tgaag
//
LOCUS       DATIML010001192         5628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3716365, whole genome shotgun sequence.
ACCESSION   DATIML010001192 DATIML010000000
VERSION     DATIML010001192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5628
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3716365"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VLJ38_20620"
     CDS             complement(<1..774)
                     /locus_tag="VLJ38_20620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSU42001.1"
                     /translation="MKLPVFAETFGAELDAGSQVGDLWLPAENGSVRCVACAHRCVVT
                     EGSRGACGVRFNRAGALRVPFGYVARRYVRAVETNTIFHVLPGAQALTFGMYGCDLRC
                     PYCHNHRLSQALRDGPTQEHPTPLSAEALVDEAVSAGCRVLCAAYNEPMLSVEWMTRV
                     FETARARGLVTAVVSDGHSTPEALRYLRRAADVFRVDLKAHDEPSYKKLGGRLQPVLD
                     SIALARELGYWVEVVTLVVPGLNQEARAIASLGARLREID"
     gene            996..3077
                     /locus_tag="VLJ38_20625"
     CDS             996..3077
                     /locus_tag="VLJ38_20625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42002.1"
                     /translation="MRPNYPVSSLAALVIACGATSSESAKERANQLASQSEAESQSCL
                     EATSSSGWVSGGVGSAPSRFSLELDATPSTSGEDALFGLAHVSPSAYSDLAAIVRFND
                     AGKIDARDGDVYRAVTDVAYEPGVPQHLTFQVDTYARTYSLLARRDSQGGYVASDFKY
                     RSEQANADGLAYFGMKVDGGGPLDVCNVKLVDQSCTPADETDGFVNLAFPSQGTFVTV
                     SFDATPNGSNLDSVFGVSAGAARSFDDIAAAVRFNPDGRIDARDGSAYREINSSLPAY
                     VAGQTYHFDLLLDVLGHAYTVVINGSVVGHNFAFRTSQAQVATLGNFVIESDSGGVTS
                     CGFGFVPARDAVYLHSMPVPTHTVPLSDGRFLDYDASKTVVYDSRGLANGTLTLAGPA
                     PADVAMAADAAGNVYRLGNFSGTVDYGAGPLTSAGGVDAYVVKYDAAFKPVWSKNIGG
                     PTDDVPSTWTLNVNARGDVSFVVRDDQLVRLDAQGNVVYESIKVPPDTELALDPSGNV
                     FTTDDPPADRALSITKRDENGNVVWTQHLPVVRGGADIERLAADATGGVVFAGEIQGG
                     FAFPDGSTFTFDAGENGPQTYVAKLDANGARVYARATEISYFEGLTVDGLGNAAVSGT
                     HVNPFIPRVEEYGPTGALVREVSTADLLGLPDLGSGSAVKADAAGDLYWAFWPGVATD
                     YGAFFVKLHSP"
     gene            complement(3078..3992)
                     /locus_tag="VLJ38_20630"
     CDS             complement(3078..3992)
                     /locus_tag="VLJ38_20630"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSU42003.1"
                     /translation="MRIHHLNCVSTCPLGGWLMDHRTRSIVARGRLTCHCLLLETNRE
                     LVLVDTGFGLNDVRDPKSRLSAFFLALVKPEFREGMTAIRQIEGLGFDPRDVRHIVMT
                     HLDFDHAGGLDDFPWARVHLLEREQREAAARRTWLDRQRFRPQQWSTQASWLGYSHAA
                     GESWYGFEHVQELDGLPPDILLVPLFGHTLGHAGVAVARGGDWLLNAGDAYFFHAEMD
                     SERPWCTPGLRFYQTLMEKDRRARLANQARLRELRRTEHASVEIFCSHDVREFERLAH
                     RSAALPPEALRTAAPLVPKDAAALHLGP"
     gene            complement(4012..4746)
                     /locus_tag="VLJ38_20635"
     CDS             complement(4012..4746)
                     /locus_tag="VLJ38_20635"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSU42004.1"
                     /translation="MQNEVEIGQNRTGTAMSPRLTAEMVAGTGEFVPQSASVSDRQSI
                     AVVRATYAREASQVGSLPPPVTLGGMASAAVQGVRGTRPAQFLDKLGERLAFERSGVR
                     LYEALISKFEAFGGFEGGPTLAELEQILHDEHRHFQLLTETLKQLGGDPTAITPSADI
                     AATLSRGVMDVLVDPRATFLQSLEAILVAELVDNDCWDTLVDLAGQRKDEDLAERLVG
                     ATEDERRHLDWVRRWIAAAQNRSDGV"
     gene            complement(4800..>5628)
                     /locus_tag="VLJ38_20640"
     CDS             complement(4800..>5628)
                     /locus_tag="VLJ38_20640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42005.1"
                     /translation="QVYRFGLLEDFDHMYRYSALMDRVEGKDANTLLQSYTDILPGRP
                     TAVEHRAPEDDLRDPYDKQSAALITKLHANTLISGEYQTHDYYMTIGPTYADPLGRQL
                     YAEIASIEEQHVTQYESIVDATETWLEKWLLSEATEVYNYYSCVEYEKNSRLKAIWER
                     FLDYELGHLAHVRELFQRIEGRDAAEVLDSKLPAPIAYESHREFVRDTLRNEVDLRAL
                     GPNFIPSAEEPAAGASARYRAQLNAEGSPTEAVAAGYVWTPGTELVRGEPLRRSAAE"
BASE COUNT          940 a         1846 c         1858 g          984 t
ORIGIN      
        1 atcgatttcc cgcaggcgcg cgccgagcga cgcgatggct cgcgcctctt ggttcaagcc
       61 cgggacgacg agcgtcacca cctcgaccca gtacccgagc tcacgcgcga gcgcgatcga
      121 gtcgagcacc ggttgcaagc gccccccgag cttcttgtag cttggctcgt cgtgagcttt
      181 gaggtcgacg cgaaagacat cggcggctcg gcgcaggtag cggagtgctt ccggtgtcga
      241 atgaccgtca ctcacgacgg cggtcacgag gccacgcgcc cgcgccgttt cgaacacgcg
      301 cgtcatccac tccacgctga gcatcggttc gttgtacgcg gcgcagagca cgcgacagcc
      361 tgcgctgact gcttcgtcga cgagcgcttc ggcgctcagc ggcgtcgggt gttcctgcgt
      421 cggtccatca cgtagcgcct gcgagaggcg atgattatgg caatacggac aacgcaagtc
      481 gcaaccgtac atgccgaacg tcaacgcctg cgcgccgggc agcacgtgga agatggtgtt
      541 ggtctcgaca gcgcgaacgt agcggcgcgc gacgtagccg aacggaacgc gcagagcgcc
      601 ggcgcggttg aagcgcacgc cacaggcgcc gcggctgccc tcggtgacga cacagcgatg
      661 cgcgcaagcc acgcagcgga cgctgccgtt ttccgccggc agccaaaggt cgcccacctg
      721 ggagccggca tcgagctccg cgccgaacgt ctcggcgaac accggcagct tcatggctcg
      781 tcaccatgcc acgcggatcg aagacgagag cgtggcgaat tgtcgcttca gcgcctggag
      841 tttgtacaac gcggagccgc cgcgcggagg caagttgtcc taatggggcg aagcgcctcc
      901 ggctgagttg gcccgcgtca cccgcccgga gatggcgccg aaaatttctg gcttgccttt
      961 tgctcatctc gttctgcgga aggagaggca ttgtcatgag acccaattat ccggtctcga
     1021 gcctggctgc gctcgtgatc gcttgcggag ctacgtcgag cgagagcgcc aaggaacgag
     1081 ccaatcagct ggctagtcag tcggaggcag agtcgcagtc atgtctcgag gcgacgagct
     1141 cgagcggatg ggtgagtggc ggcgtcggtt cggctccgag ccgtttcagc ttggagctcg
     1201 acgcgacgcc gagcacgagt ggagaagacg cgctgttcgg tctcgcgcac gtcagtccct
     1261 ctgcctactc cgatctggcc gcgatcgtgc gcttcaacga cgcggggaag atcgacgctc
     1321 gcgatggcga cgtgtatcgc gccgtcacgg atgtcgcgta cgagcccggc gtgccgcagc
     1381 atttgacctt ccaggtcgac acctacgctc gcacgtattc cttgcttgcc aggcgggatt
     1441 cgcagggtgg ttacgtcgca agcgacttca agtatcgcag cgagcaggcg aacgccgacg
     1501 gactcgcgta tttcggcatg aaagtcgacg gcggcgggcc cctcgacgtc tgcaacgtca
     1561 agctcgtgga ccagagctgc acgcccgccg acgagaccga cggcttcgtg aacctcgcct
     1621 ttccttcgca gggtacgttc gtcacggtct cgttcgacgc gacgccgaac ggctcgaatc
     1681 tcgatagcgt gttcggcgtt tcggcaggag cggcgcgctc gttcgacgac atcgccgccg
     1741 cggtgcgctt caatcccgac gggcgcatcg acgcccgtga cggcagcgcg taccgtgaga
     1801 tcaattcgtc tttgccggcg tacgttgccg gccagacgta tcacttcgac ctcctgctcg
     1861 acgtgctcgg gcacgcctac acggtcgtca tcaacggctc ggtggttggc cacaatttcg
     1921 cgtttcgcac gtcacaggct caggtcgcga ccctcggcaa tttcgtgatc gagtcggaca
     1981 gcggcggtgt cacgagctgc gggttcggct tcgttccggc ccgcgacgcc gtttacttgc
     2041 actccatgcc ggtgcccacc cacacggtcc cgctctccga cggccgtttc ttggattacg
     2101 acgcgtccaa aacggtcgtt tacgacagcc gcggacttgc caatggcacg ctaacgctcg
     2161 caggtccggc gcccgccgac gtcgcgatgg ccgcggacgc cgcgggcaac gtgtaccggc
     2221 tcggcaactt cagtggcacg gtcgactacg gagcggggcc gctcacgagc gccggcggcg
     2281 tggacgctta cgtcgtcaag tacgacgctg cgttcaagcc ggtgtggagc aaaaatatcg
     2341 gcggcccgac cgacgatgtc ccgtcgacgt ggacgctgaa cgtcaacgct cgcggcgacg
     2401 tgtcgttcgt cgtccgcgac gatcagctcg tgcgcctgga cgcgcaaggc aacgtcgttt
     2461 acgagtccat caaggtcccg ccggatacgg agctggcgct cgatccgagc ggcaacgtct
     2521 tcacgaccga cgatccgccc gccgaccgcg ccttgtccat caccaagcgc gacgagaacg
     2581 gcaacgtcgt ctggacacag cacctgcccg tcgtcagagg gggcgcagac atcgaacgcc
     2641 tggccgccga tgcgacggga ggtgtggtgt tcgccggaga aatccaagga ggatttgcgt
     2701 ttcccgacgg cagcaccttc acgttcgacg ccggcgaaaa cggaccgcaa acgtacgttg
     2761 ccaagctcga cgcgaacggc gcgcgcgtct acgcgagggc caccgagatc agctacttcg
     2821 aagggctcac ggtggacggg ctcggcaacg ccgccgtgtc ggggacgcac gtgaacccct
     2881 tcatcccccg cgtcgaggaa tacgggccga cgggtgccct cgtgcgcgag gtgtcgacgg
     2941 cggatttgct cggcctgcct gatctgggat ccggctcagc cgtgaaggcc gacgccgcgg
     3001 gcgacctata ttgggcgttt tggcccggcg tggccaccga ttatggagcg ttcttcgtca
     3061 agctgcactc gccgtgatca tgggcccaaa tgcagagccg ccgcgtcctt cggcacgagc
     3121 ggcgcggcgg ttcgcagcgc ctcgggcggc aacgcggccg agcggtgtgc cagacgctcg
     3181 aattcccgca cgtcgtggct gcaaaagatc tccacgctcg cgtgctccgt gcgccggagc
     3241 tctcgtagtc tcgcttgatt ggcgagccga gctcgacggt ccttttccat cagcgtctga
     3301 tagaagcgga gcccaggcgt gcaccacgga cgctcggaat ccatttccgc gtggaaaaag
     3361 tacgcgtcgc ctgcgttcaa tagccaatcg ccgccccgcg ccacggcgac gcccgcgtga
     3421 ccgagcgtat gaccgaagag cggcacgagc aggatgtcgg ggggcaaacc gtcgagctct
     3481 tgcacgtgct cgaagccgta ccaggactca ccggccgcgt gcgagtagcc gagccaagac
     3541 gcttgcgtcg accattgctg cggacgaaaa cgctgccgat cgagccaggt ccgccgcgct
     3601 gccgcctctc tttgctcgcg ttccaagagg tgcacgcgcg cccacggaaa atcgtcgagc
     3661 ccgccggcgt gatcgaagtc gaggtgcgtc atcacgatgt gccgcacgtc ccgcggatcg
     3721 aacccgagac cttcgatctg ccgaatagcg gtcatgccct ctcgaaactc cggcttgacg
     3781 agcgcgagga agaacgcgct caggcggctc ttcggatcgc gcacgtcatt caagccgaag
     3841 cccgtatcca ccagcacgag ctcgcggttc gtctcgagca agaggcagtg gcaggtgagc
     3901 ctgccgcggg cgacgatcga gcgcgtgcgg tggtccatca gccagccgcc gagcgggcag
     3961 gtcgagacgc agttcaaatg atggatccgc acggcacgcg ctcctgacgg ctcaaacgcc
     4021 gtcgctacgg ttttgcgcgg cggcgatcca gcggcggacc cagtcgaggt ggcgccgttc
     4081 gtcctccgtc gcgccgacca ggcgctcggc gaggtcctcg tccttacgtt ggccagcgag
     4141 atcgaccagg gtgtcccagc agtcgttgtc gacgagctcc gcgacgagga tcgcctcgag
     4201 cgactgcagg aacgtcgcgc gcgggtcgac gagcacgtcc atcacgccgc gcgagagcgt
     4261 tgcggcgatg tcggccgacg gcgtgatggc cgtgggatcg ccgccgagct gcttcagggt
     4321 ctcggtgagc agctggaagt ggcggtgctc gtcgtgcaag atctgctcga gctcggcgag
     4381 cgtcgggccg ccttcgaacc cgccgaacgc ctcgaatttc gagatcaacg cctcgtacaa
     4441 gcgcacgcca ctgcgttcga aggcgagccg ttccccgagc ttgtccagaa attgtgccgg
     4501 acgcgtgccg cgcacgcctt ggactgccgc gctcgccatc ccgccgagcg tcacgggcgg
     4561 cggcaggctc ccgacctgag aggcctctcg cgcgtaggtc gcgcgcacga ccgcgatcga
     4621 ttggcgatcg ctcacgctcg cgctctgcgg cacgaactcg ccggtgccag cgaccatttc
     4681 ggccgtgagc ctcggcgaca tggccgtacc cgtgcgattc tgtccgattt cgacttcatt
     4741 ttgcatgttg gctattccct ggttcggcta gcgaaaggtt ctgtgtccgt tgccgcgcgt
     4801 cactcggcgg cggagcggcg cagcggctcg ccgcggacca actccgtgcc gggcgtccag
     4861 acgtagcccg cggcgacggc ttccgtcggt gacccctcgg cattcaactg agcgcgatag
     4921 cgcgcggagg ctcctgctgc gggctcttcg gcgctcggga tgaagttcgg gcccaacgcg
     4981 cgcaggtcca cttcgttgcg caacgtgtcg cgcacgaact cgcgatgact ttcgtacgcg
     5041 atcggtgccg gcagcttgga gtcgagcacc tcggcggcgt cgcggccttc gatgcgctgg
     5101 aacagctcgc gcacgtgcgc gaggtgaccg agctcgtagt cgaggaaacg ctcccaaatc
     5161 gccttgaggc gcgagttctt ctcgtactcg acgcagctat aatagttgta aacctccgtt
     5221 gcctcgctca agagccactt ttcgagccag gtctccgtgg cgtcgacgat cgactcgtat
     5281 tgcgtcacgt gctgctcttc gatcgacgcg atctcggcgt agagctggcg gccgagcgga
     5341 tccgcatacg tcgggccgat cgtcatgtag tagtcgtgcg tctgatattc gcccgagatc
     5401 agggtattgg cgtgcagctt ggtgatgagc gcggcggatt gtttgtcgta gggatcgcgg
     5461 aggtcgtcct cgggcgcgcg gtgctcgacc gccgtggggc gccccggcaa gatgtccgta
     5521 tagctctgga gcagcgtgtt ggcgtccttg ccctcgacgc gatccatcag tgcggagtag
     5581 cggtacatgt ggtcgaaatc ctcgagcaga ccgaagcggt acacctgg
//
LOCUS       DATIML010001193         1988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3716453, whole genome shotgun sequence.
ACCESSION   DATIML010001193 DATIML010000000
VERSION     DATIML010001193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3716453"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            893..>1988
                     /locus_tag="VLJ38_20645"
     CDS             893..>1988
                     /locus_tag="VLJ38_20645"
                     /inference="COORDINATES: protein motif:HMM:TIGR03803.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor tandem repeat GloVer-containing
                     protein"
                     /protein_id="HSU42006.1"
                     /translation="MSSSKRGARALGLMLALPIALAAGTAHAQSYSVLHAFSGPPDGS
                     GPQGGLIRGVDGNFYGTTTGGGVNDLGAVYRMTPSGAVTIVHSMAGVEAATPFGELVL
                     GPDGNFYGTTALGGTGVFNGNGVVYRVTPSGALTTLHAFTAADGQHPQTALLRAADGN
                     FYGTATGGGATGNGTVFRISASGTFTVLHSFTGTDGGFPLGALIAGSDGNFYGTTANG
                     GSANGGTAYRISPSGTFTSLHSFTFAAQDGNDPRGALVLGSDGNFYGTTEFGGASGGH
                     GTTYRMTPSGAVTILHAFTGFDGDAPLAGLTLARDGRFYGTTSTLGQNGSGTIFSMTA
                     AGAVTVQRALSSSDGSPGEAKLLQASDGAIY"
BASE COUNT          314 a          685 c          692 g          297 t
ORIGIN      
        1 cccgcctcgg actcagccgg tggcgctccg acgaacacgg gcggcgccgc ggcgttgggc
       61 ggagcgggcg accgcggagg cggcggagca ctcgtgggga ccgcggggct cgcagccgtt
      121 ccgatggccg gcgccactgc aacgggcagc gcaggcgcgg acactgccgc ggccggcgcc
      181 tgtgatccgg ggtcacgtgc ctgcgcaggc tgcgccaccg acgccgattg tgacggcgac
      241 ttgcgctgcg acacggtcgc tgcccattgc gtcgaatgtg ttacttccgc cgactgcacg
      301 agctccgagc gtgacgcttg cgatgcggtg acgcgagcct gtcgcgtcgg ctgcgcgaac
      361 gatcgtgact gcgccgtgca cgacgacacc ccgcattgtg agctcgctcg cgccgtctgc
      421 gttcagtgcg tctccgacgc gcaatgcgag agcggcaaac gctgcgaccc gcgtgcgctc
      481 acgtgccttg attgcgcgaa cgaccccgat tgtctgcggg cggccccgtg aagcgtacga
      541 accccgatcg gcgcgacgtt cccagggcgc gaagttgcag ggcgcgaact tgaggacgcc
      601 gcgccgcgaa cgggcgttgc ccggccagtt acgcgccgga cggatcgact gcgcgcacga
      661 ctgaagattg gttgacgtgc gcaactcgga tcatcacgcc gagttcactg gcgtcaggac
      721 ccgatgctgt gagatggtgc gcgccgtagg gaacgaagtc accggggccg ctgcaccagc
      781 gctcgtccga gagcgccggt cagtgcacgc atttcgccga atcatcaagc aagggaggtc
      841 catcatgagc atgctgacga acgcagaaaa cacgagaggc gacgagcaaa gcgtgagctc
      901 gagcaaacgt ggggcgcgcg cgctcgggtt gatgttggcg ttgccgatcg cgctcgcggc
      961 ggggaccgcg catgcgcagt cgtatagcgt gctgcatgcc ttcagcgggc cgcccgacgg
     1021 ctcggggccg cagggcgggc tcatccgagg cgtcgacggc aacttctacg gcacgacgac
     1081 gggcggcggc gtcaatgacc tcggtgccgt ttatcggatg acgccttccg gtgccgtcac
     1141 catcgtgcat tcgatggcgg gcgtcgaggc cgccactccg ttcggcgagc tcgtgctcgg
     1201 ccccgacggc aacttttacg gcacgaccgc gctcggcgga acgggcgtct tcaacggcaa
     1261 cggcgtggtc taccgcgtca ccccgagcgg cgccctgacg acactgcacg cgttcacggc
     1321 cgccgacggc caacatccac aaacggctct cttgcgcgca gcggacggga acttttacgg
     1381 caccgccacg ggcggcggcg ccacgggcaa cggcaccgtg ttccgcatct cagcgagcgg
     1441 cacgttcacg gtactgcatt cgttcaccgg gaccgacggc ggctttccgc tcggggcgct
     1501 cattgccggc tccgatggca acttctacgg cacgaccgcg aacggcggta gcgcgaacgg
     1561 cggcaccgct taccgcatct cgccctcggg cacgttcacc tcgttacact cgttcacgtt
     1621 cgccgctcaa gacggcaacg atccgcgcgg agcgctcgtg ctcggctccg acggcaactt
     1681 ctacggcacc acggagttcg gcggcgcgag cggcggccac ggcaccacgt atcgaatgac
     1741 gccgtcgggc gccgtcacga tcctgcacgc gttcaccggg ttcgacggcg acgctccgct
     1801 cgcgggcctc acgctcgcgc gcgacggccg tttctacgga acgacgagca ccctagggca
     1861 gaacggctcc gggacgatct tctcgatgac cgccgcgggc gcggtgacgg tgcagcgcgc
     1921 cctctcgtcg tcggacggca gccccgggga ggcgaagctg cttcaggcga gcgatggagc
     1981 gatctacg
//
LOCUS       DATIML010001194         2510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3138843, whole genome shotgun sequence.
ACCESSION   DATIML010001194 DATIML010000000
VERSION     DATIML010001194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3138843"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VLJ38_20650"
     CDS             <1..482
                     /locus_tag="VLJ38_20650"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HSU42007.1"
                     /translation="LRRAFEDGADADARDDLALASLFGGLCLANAKLGAVHGLAGPLG
                     GALHAAHGALCARLLPEVMEKNLAHARRAGDADVLGRFGAVARILCGQPDAGPEAGLL
                     WVRELVESLAIPRLSSYGLTPARTGDIIERACVSSSMKGNPFELGQDELYDILERAS"
     gene            485..1102
                     /locus_tag="VLJ38_20655"
     CDS             485..1102
                     /locus_tag="VLJ38_20655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42008.1"
                     /translation="MPVDVPASVAPASAAGATEGGGDAPAATVADADDVAAERLVALC
                     VHLGIATPYGAVGLSLDVVPVSWLGLEAGVGTNFDSAEFAFMPRLRVAPGKQMTTHFT
                     LGAGVSYLRRYYGHEQNGLAGFMRVFESMAEGRMQLTLWQPAYFANLELGGESRRGHV
                     VARGYLGFTHLINASQYSCTAGDFACTPSAATNLVYLGGSLGYAF"
     gene            1109..1780
                     /locus_tag="VLJ38_20660"
     CDS             1109..1780
                     /locus_tag="VLJ38_20660"
                     /inference="COORDINATES: protein motif:HMM:NF014015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42009.1"
                     /translation="MARPKALVSWSSGKDSAYALWEARRAGELDIVGLLTTVTATFER
                     VSMHGVRELLLDRQAAELGLPCQKLHIPSPCPNEVYEATMGQALADAKARGITHFVFG
                     DLFLADIRAYREQRLDAVGVHAVFPLWGRDTHGLARDMLAQGFRAFTTCIDPRKLEPS
                     FAGREFDAAFLSELPPAVDPCGENGEFHTFVTGGPLFAREISVRRGEVVERDGFVFAD
                     WMPAE"
     gene            1777..>2510
                     /locus_tag="VLJ38_20665"
     CDS             1777..>2510
                     /locus_tag="VLJ38_20665"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU42010.1"
                     /translation="MSDPRVREQASREQHASSREPDADTLRIVSLLPSATEIICALGA
                     GERLVGVSHECDFPELVRRLPSLTRSRIDAHGSSGAIDAAVREVIHGALSLYAVDERL
                     LGALAPDVVVTQDLCEVCAVSLDDVRAAVARLSRRDDVQIVSLQPTRLEHVFGDIERV
                     ARALGRPQAGHEVRRALEGRVHAIAQRAGALPSRPRVVSVEWLEPLMLGGTWMPDLIE
                     LAGGAAAGASAGEPAPTVSARELAALA"
BASE COUNT          357 a          856 c          870 g          427 t
ORIGIN      
        1 cgctgcggcg tgcgttcgag gacggcgccg atgccgacgc gcgcgacgat ctcgcgctgg
       61 cgagcctgtt cggcggcttg tgcctcgcga acgcgaagct cggcgccgtg cacggtctcg
      121 cgggcccgct cgggggcgcg ctgcacgctg ctcacggcgc tctctgcgcg cgcctcttac
      181 ccgaggtgat ggagaaaaac ctcgcccacg cgcgcagggc gggtgatgcc gacgtgctcg
      241 gccgcttcgg cgccgtggcg cgcattcttt gcgggcagcc cgacgccgga ccggaagcgg
      301 gtctgctctg ggtccgcgag ctcgtcgagt cgctcgcgat cccgcgcctc tccagctacg
      361 gactcacgcc cgcgcgcacc ggcgacatca tcgagcgagc ctgcgtctcg agcagcatga
      421 aaggcaatcc cttcgagctc ggccaagacg agctttacga catcctcgaa cgcgcgagct
      481 agtcatgccc gtggacgtcc cagcgagtgt tgcgcctgcc agtgctgctg gcgcgacgga
      541 gggcggcggg gacgcgccag ctgccacggt cgcagacgcg gacgacgtcg cggcggaacg
      601 cctggtcgcg ctctgcgtcc atctgggaat cgccacgccg tacggcgccg taggcctatc
      661 gctcgacgtc gttcccgtct cttggctcgg cctcgaagca ggcgtcggaa cgaatttcga
      721 cagtgcggag tttgcgttca tgccgaggct acgcgtcgcg ccgggcaagc agatgacgac
      781 ccacttcacg ctcggcgccg gtgtttcgta cctgaggcgc tactacggcc acgagcagaa
      841 cgggttagcc ggattcatgc gcgtgttcga aagcatggca gaaggcagga tgcagctaac
      901 gctctggcaa ccggcctatt tcgcgaatct ggagctcggt ggcgagtccc ggcgcggcca
      961 cgtcgtcgct cgcggctacc tcggtttcac tcacctcatc aacgcgagcc agtactcttg
     1021 cactgcgggc gattttgctt gtacgccctc ggctgcgacg aatttggtct acctcggcgg
     1081 ctcgctcggc tacgccttct gaactgcaat ggcacgcccc aaagcgctcg tttcgtggag
     1141 cagcggcaag gacagcgctt acgcgctctg ggaggcgcgg cgtgcggggg agctcgacat
     1201 cgtgggcctc ttgacgaccg tgacggcgac gttcgagcgc gtctcgatgc acggcgtgcg
     1261 cgagctcctg ctcgatcggc aggcggcgga gctcggcctg ccgtgccaga agctgcacat
     1321 cccttcgccg tgcccgaacg aagtgtacga agcgaccatg ggccaagcgc tcgccgacgc
     1381 caaggcgcgc ggcatcacgc acttcgtttt cggcgatctg tttctcgccg acatccgcgc
     1441 ctatcgcgag caaaggctcg acgccgtggg cgtgcacgcc gtatttccgc tctggggtcg
     1501 cgacacccac gggctcgcgc gcgacatgct cgcgcagggg ttccgcgctt ttacgacttg
     1561 catcgatccg cgcaaactgg agccgtcctt tgcggggcgt gaattcgacg cggcgttctt
     1621 gagcgagttg ccgcccgcgg tcgatccctg cggcgaaaac ggggaatttc acaccttcgt
     1681 gacgggtggg ccgctatttg cgcgggaaat ttccgtgcgg cgcggagaag tcgtcgaacg
     1741 tgacggcttc gttttcgcgg attggatgcc ggcggagtga gcgatccgcg cgtgcgtgag
     1801 caagcttccc gcgagcagca cgcgagcagt cgcgaacccg acgcggacac gctgcgcatc
     1861 gtttcgctcc tgccgtccgc gaccgagatc atttgcgcgc tcggtgccgg cgagcggctc
     1921 gtcggcgtct cgcacgagtg cgacttcccg gagctcgtgc gtcgtctgcc gagcctcacg
     1981 cgctcgcgca tcgacgcgca cggctcgagt ggcgccatcg acgccgccgt gcgcgaggtg
     2041 attcacggcg cgctgagtct ctacgccgtc gacgagcgac tgctcggcgc gctcgcgccg
     2101 gacgtcgtcg tgacgcagga tctttgcgag gtgtgcgccg tgtcgctcga cgacgtgcgc
     2161 gccgcggtcg cgcgcctgag ccgtcgcgac gacgtgcaga tcgtgagcct tcagccgacg
     2221 cggctcgagc acgtcttcgg cgacattgag cgcgtcgccc gcgccctcgg ccgcccgcag
     2281 gccggccatg aagttcgtcg ggcgctcgag gggcgggtgc acgcgatcgc gcaacgagcc
     2341 ggagcgctgc cgtcgcggcc gcgcgtggtc tcggtcgaat ggctcgagcc gctcatgcta
     2401 ggcggcacct ggatgccgga cctgatcgag ctcgcaggcg gagcggcggc tggagcatcg
     2461 gcgggcgagc ccgcccccac cgtcagcgct cgagaactcg cggcgctcgc
//
LOCUS       DATIML010001195         1727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2560563, whole genome shotgun sequence.
ACCESSION   DATIML010001195 DATIML010000000
VERSION     DATIML010001195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2560563"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VLJ38_20670"
     CDS             <1..271
                     /locus_tag="VLJ38_20670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSU42011.1"
                     /translation="LPPGEGVFLACSFWLADCYALLKRTDEARQLFERLLALRNDVGL
                     LSEEFDPANGRLVGNFPQAFSHVGLVNTAHNLSAETGPAQQRRQS"
     gene            289..1557
                     /locus_tag="VLJ38_20675"
     CDS             289..1557
                     /locus_tag="VLJ38_20675"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HSU42012.1"
                     /translation="MRALTVVPASTGSAALVDMPEPSTTDGEILIATHAIGLCGTDRE
                     ILDGKYGRAPAGQERLILGHESIGRVNEAPPESGFSAGDWVVGIVRRPDPVPCSSCRV
                     GEWDMCKNGRYTEHGIAGLHGFGAERYRSFARYLVKVDPALGELGVLLEPTSIVAKAW
                     EHVRRTGERAHWEPKRVLVVGAGPIGILAALLGVQQGLEVHVLDRSDTGPKPALVRAL
                     GASFHASGIAALGRDWDIIFECTGAPALFFDVLQAAGPDGIVCLTGVSSGGRTMSVDP
                     GILNREFVLENLVVLGSVNANRRHYEQAADSRAGPCPYWHSRPRPRTVTAFLRPARLH
                     ENGGPRRPRARRHPRSSVGPRNQSGLECSARERTERLDGHPREARRHHARRAALPGHS
                     RRQGASRVGGVSFERRPRRVLSRRARYFRA"
BASE COUNT          270 a          575 c          579 g          303 t
ORIGIN      
        1 cttgccgccg ggggaaggcg tgttcctcgc ctgtagcttc tggctcgccg actgttacgc
       61 gctcttgaag cgcactgacg aggcgcggca gcttttcgaa cggctgctcg cgctcaggaa
      121 cgacgtaggt ctcctgtcgg aggagttcga ccccgcaaac gggcggctcg tcggcaactt
      181 cccgcaggcg ttttcgcacg tcgggctcgt caacacggcg cataacctat cggcggaaac
      241 cggcccggcg cagcagcgcc ggcaaagctg agcgaggctc gaactcccat gcgtgctctc
      301 accgtcgtcc ctgcttcgac cggctcggct gctctcgtcg acatgccgga gccgtcaacg
      361 accgacggcg agatcttgat cgcgacccac gccatcggcc tctgcggcac cgatcgcgag
      421 atcctcgacg gcaagtacgg ccgggccccg gcgggacaag agcggctgat cttaggccac
      481 gaatcgatcg gacgcgtgaa cgaggcgccg cccgagagcg gattttccgc cggcgattgg
      541 gtggtcggca tcgtgcggcg gcccgatccg gtgccgtgct cgagctgccg cgtcggcgag
      601 tgggacatgt gcaaaaacgg acgttacacc gagcacggga tcgccggtct gcacggcttc
      661 ggcgccgaac gctaccggag ttttgcgcgc tacctcgtca aggtcgatcc tgcgctcggt
      721 gagctcggcg tgctgctcga gccgacgagc atcgtcgcca aagcgtggga gcacgtgcgt
      781 cgtacgggcg agcgcgcgca ctgggagccg aagcgggtgc tcgtggtggg cgcggggccc
      841 attgggatcc tcgccgcgtt gctcggcgtt caacaggggc tcgaggtgca tgtgctcgat
      901 cgcagtgaca ccggaccgaa acccgcgctc gtgcgcgcgc tgggcgcgag cttccacgcg
      961 agcgggattg cggcgctcgg gcgcgactgg gacatcattt tcgaatgcac cggcgcgccg
     1021 gcgctgttct tcgacgtgct gcaagcggcg ggaccggacg gcatcgtgtg cctgacgggc
     1081 gtctcgtcgg gcggccgcac gatgagcgtc gatccgggca ttttgaaccg cgagttcgtg
     1141 ctcgaaaacc tcgtcgtgct cggctccgtg aacgcgaatc ggcgccacta cgagcaagcc
     1201 gccgattccc gtgcagggcc ttgcccatat tggcattcgc gtccacgacc tcgaacggtc
     1261 actgcgtttt tacggcctgc tcggcttcac gaaaacggcg ggccccgtcg gccccgagcc
     1321 cgtcgccatc ctcgatcatc cgtcgggcct cgaaatcaat ctggtcttga atgctccgct
     1381 cgcgaacgaa ccgaacgtct tgatggacat ccccgcgaag cacgccggca tcacgcacgt
     1441 cgcgctgctc tgcccggaca ttctcgccgc caaggcgcgt ctcgagtcgg aggggtttcc
     1501 tttgagcgga ggccccgtcg agttctttcc cggcgcgcac ggtattttcg tgcgtgatcc
     1561 ggacggcaac gtcatcgagc tgcaccagcg cggctaacgt cactggcggc caacgtcacg
     1621 tggcggccaa cgtcacgtga aagtgaggat cgtcttcacg tcgtcgggct gatgcgtgaa
     1681 ggccgactcc cattgctcga gcggcacgcg gcgcgtgacg agcccgc
//
LOCUS       DATIML010001196         6680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4581567, whole genome shotgun sequence.
ACCESSION   DATIML010001196 DATIML010000000
VERSION     DATIML010001196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6680
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4581567"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..1230)
                     /locus_tag="VLJ38_20680"
     CDS             complement(79..1230)
                     /locus_tag="VLJ38_20680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42013.1"
                     /translation="MSERKPVRVDTTPPPIPLTRERKLADLAPPRDEQESVTEALFAD
                     RFVEEAPDEATLVQPLARRPSEAPPGPVPERAAYATLRPPPPPEPLPRLMPSTLPPPV
                     ALATVPPPPPPGPPQGIWRPMLATAALSATIGAIVSVGMWAVRSPAETSKPAMAATLE
                     PVKAEPTAVNTVGPCPIPSTPSNSTTTSTSLSSMSQGPVPHEVSLEALPVETRSSRAA
                     ANAAPVLRAPAAPPPRAARAVVSERAVATRAAAAEPARPARAESDHASRHAHKAAEPA
                     AAADDDDDAPAAAPPPSPPPAPTAGPDRTAIARAVGRAASAASSCETGPQSGRAQITF
                     APSGNVQSVQLIQPFSDNAVNGCVLRALGRAHVPPFAGEPVIVRKALSW"
     gene            1693..4986
                     /locus_tag="VLJ38_20685"
     CDS             1693..4986
                     /locus_tag="VLJ38_20685"
                     /inference="COORDINATES: protein motif:HMM:NF021424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HSU42014.1"
                     /translation="MTIRVALRHRTHYVYDRRVRLGPQVVRLRPAPHSRTRVPSYSFK
                     VSPSEHFLNWQQDPHGNWLARLVFHEPTDHLTLEVDLLADLSVQNPFDFFLEPDAEEV
                     PFTYDPSLSEELAPYLRLTPNAPLVDALARSLKLEGRTIDFLVALNQKIHERTKYVIR
                     LEPGVQAPDETLELRSGSCRDSAWLLVQILRRVGLAARFASGYLIQLKADQKSLDGPS
                     GTDHDFTDLHAWAEVYLPGAGWVGLDATSGLLTSEGHIPVACTPEPGSAAPLSGALDE
                     CESVLEHTMTIERVRETPRVTLPYSDAEWARVEALGARVDRDLVANDVRLTMGGEPTF
                     VSIDDMDGFEWNYGALGENKRKLAGVLFRRLARRFAKSPLLHYGQGKWYPGEQLPRWA
                     LGCFWRKDGEPVWVDPKRYAEDGASDGMTDEHAGRFVARLAARLGVDGRHAQPGYEDA
                     YYYLLRERRLPVNVDVLDNRLDDEMERERVARVFERGLKKAIGHTLPLRPIGGGRWES
                     GKWFLRREHLFLTPGDSPMGYRLPVDSLPWVAELDYPYVIPPDPFDEQKPLPRRGERR
                     VLQQPGEARERGDVAKPRPRESAADLVRTALCVEPRDGTLHVFLPPVAYLEDYLELVA
                     AVEDAATELDYRVRIEGYTPPSDARLERFSVTPDPGVIEVNVHPSSSFASLSNVTTGL
                     YEEARESRLGTEKFMVDGRHTGTGGGNHVTLGAATPESSPFLRRPDLLASLIGYWHDH
                     PALSYLFSGMFIGPTSQAPRVDEARHEATHELEIALGVARELGARPLAPWLTDRVFRH
                     LLADVTGNTHRTEFCIDKLYSPDGPTGRLGLLELRAFEMPPHAKMSIVQQLLVRSLVS
                     AFWQQPYRAKLPRWGTQLHDRFMLPHFVDQDFGDVLRDLGERGYGFDRRWFDAHFEFR
                     FPLVGSIAQESVELEVRRALEPWHVLPEETDAGGTARAVDSSLERVQVRLRGAVPGRH
                     LVACNGALVPLHPTGTQGESVAGVRFRGWRLPSSLHPTIPVHAPLVLSLLDAWTERPL
                     GGCTVYVSHPGGRAYDTFPVNAMEAESRRGALFSPFGHAHGKVDPKRLARLDNPDYPL
                     TLDLRRTRA"
     gene            4999..5439
                     /locus_tag="VLJ38_20690"
     CDS             4999..5439
                     /locus_tag="VLJ38_20690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42015.1"
                     /translation="MRSRFLERVAVALGLVLAACGSKSTPPPDTAKQAAIDATARLAG
                     DWRLVDFQPTQPLEPMFAQLLAAQLRQLVVTFRPGTMHIEGVGVSADRIFTVTSAAAD
                     GFSATITDPTNVVYQVNGAFQGQRLGFTSLTDPWRGQGTLERVR"
     gene            5441..>6680
                     /locus_tag="VLJ38_20695"
     CDS             5441..>6680
                     /locus_tag="VLJ38_20695"
                     /inference="COORDINATES: protein motif:HMM:NF025761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HSU42016.1"
                     /translation="MTQSQSQVPSYPPEGFRYAQRPSVYDEAFLPSGEPRPHYAELWH
                     GVEELGPTEISKRWEQGRRLIRENGVTYNVYGDPRGMDRPWVLDPIPLVLAAKEWNEL
                     ARGLDQRARLLNALLTDLYGAQATLRERLLPIELVFGCPAFLRPLHGIEPPGGVYLHL
                     YAADLARGPDGGFWVLGDRTQAPSGAGYALENRIVVSRLLSQLFRDCKVERLAPFFSA
                     LRESLASLAPRGREQPRVVLLTPGAYNETYFEHAYLARYLGYSLVEGADLTVRDQTVY
                     LKTLGGLERVDVILRRMDDGFCDPLSLRSDSSLGIAGLVRAVRRGNVTIANALGSGLV
                     ESPALLAFVPALCRRLLGEELELPSVATWWCGEEPALRYVIDHLPELVIKPAFFGPHA
                     PEPVFGGALSVEERADLARRI"
BASE COUNT          988 a         2290 c         2304 g         1098 t
ORIGIN      
        1 ttgatttacc gaggcatggg ccggccacag cggggcgcct aacccggcgc accggcgccg
       61 ctggcggttg cactcgaact accagctgag cgctttgcgg acgatgacgg gctcgcccgc
      121 gaagggcggc acgtgagcgc ggccgagggc acgaagcacg cagccgttca ccgcgttgtc
      181 cgaaaacggc tggatgagct ggacggactg gacgttaccc gagggcgcaa aggtgatttg
      241 cgcacggccg ctttgcgggc ccgtctcgca ggagctcgcg gccgaggcgg cgcgaccaac
      301 tgcacgcgcg atcgccgtgc gatcgggtcc cgcggtggga gccggaggtg gactcggggg
      361 cggagccgcc gccggagcgt cgtcgtcgtc gtcagcggcc gccgcaggct cggcagcttt
      421 gtgcgcatgg cgtgaggcgt ggtcgctttc agcccgagcg gggcgcgccg gttccgccgc
      481 ggcggcgcgc gtcgcgaccg cgcgctcgct gacgacggcg cgagcggcgc gaggcggcgg
      541 cgcggctggt gcgcgcaaca cgggcgcggc gttcgccgca gcgcgcgagg acctggtctc
      601 gaccgggagc gcttcgagtg agacctcgtg tgggaccggg ccctgcgaca tggaggagag
      661 ggacgtcgaa gtcgtcgtcg agttcgatgg cgtgctcggg atcggacacg ggccgaccgt
      721 gttgacggcc gtgggctcgg ccttgacggg ctcgagcgtc gcagccatcg ccggcttcga
      781 ggtttcggcg ggtgagcgca cggcccacat accgacggaa acgatcgcgc cgatggtggc
      841 gctcagggcg gcggtcgcta gcattggacg ccaaatgccc tgcggcggcc ccgggggtgg
      901 aggtggaggc accgtggcga gcgcgaccgg cggcggcagc gtgctcggca tgagtcgcgg
      961 cagcggctcg gggggcggtg gcggtcgcaa ggtcgcgtac gcagcacgct cgggcacggg
     1021 tccgggcggc gcttccgacg gccgacgtgc aagcggttgc acgagcgtcg cttcgtcggg
     1081 cgcttcttcg acgaagcgat cggcgaacag cgcttccgtc acgctctctt gttcgtcgcg
     1141 aggcggcgcg aggtcggcta gcttgcgttc gcgcgtgagc gggataggcg gcggtgtcgt
     1201 gtcgacgcgc acgggctttc gctcgctcac tggcttacct ttgtggaacg ccgtttcacg
     1261 cagtcggtga taacgctgcg ccaaatcgaa gaagctttcg cggaggggcg cggtgatgaa
     1321 cgacgaagac gaccgacgcg ccggccgggc ttcgcgatca cccgatggct cgtcgcttct
     1381 gttagcatcg tcgggagtcc acgcgcggtg tcgcaggacc tgcgcagcac caccgcgacc
     1441 cgctggcaga tcagcgagta cgggagatgc gcttcggggc ttttgacgtc tggccggcat
     1501 gtttccgacc ctcctaatgc ccgcatggtc ccacagatcc gtacatgtgg ggaacatgaa
     1561 acgaactagg caaatttgcc tgaaacgatg accagcctga acatttgaac tagcagccgg
     1621 ccggggcgaa atgcatccga aacacgttga aaacgccccg ggtcactgca catcgagaca
     1681 gtcgtcgacc cagtgactat tcgcgtcgcc ctccgccacc ggactcatta cgtctacgac
     1741 cgccgcgtgc ggctcggtcc tcaagtcgtg cgcctgcggc ctgcgccgca ttcgcgcacg
     1801 cgcgtgccga gctactcgtt caaggtctcg ccgagcgagc acttcttgaa ctggcagcaa
     1861 gacccgcacg gcaactggct cgcgcggctc gtctttcacg aaccgacgga tcacctcacg
     1921 ctcgaggtcg acctgctcgc tgatctcagc gtgcaaaatc cgttcgactt cttcctcgaa
     1981 ccggacgccg aagaggtgcc gttcacctat gacccctcgc tgtccgagga gctcgcacct
     2041 tatttgcgac tcacgccgaa cgcgcctctc gtcgacgctc tcgcgcgttc gctcaagctc
     2101 gaaggacgca cgatcgattt tttggtcgcg ctaaaccaaa agatccacga gcggaccaag
     2161 tacgtgatcc gtttggaacc gggcgtgcag gcgccggacg agacgctcga gctccgcagc
     2221 ggttcgtgtc gcgactcggc gtggctcctc gtgcagatcc tgcggcgagt cggcctcgcc
     2281 gcgcggttcg cctccggcta cctgatccag ctgaaagccg atcaaaagtc gctcgacggg
     2341 ccttcgggca ccgaccacga cttcaccgac ctgcacgcct gggcggaggt gtatttgccg
     2401 ggcgccggct gggtcgggct cgacgcgacc tcaggcttgc tgacgtcaga agggcacatt
     2461 cccgtcgcgt gcacgcccga accaggaagc gcggcgccgc tctccggcgc gctcgacgaa
     2521 tgcgagtccg tgctcgagca cacgatgacg attgagcgcg tgcgcgagac gccgcgcgtc
     2581 acgctgccgt actcggacgc ggagtgggca cgcgtcgagg cgctcggcgc gcgcgtcgat
     2641 cgcgacctcg tggccaacga cgtgcgcctg acgatgggcg gtgagccgac gttcgtctcg
     2701 atcgacgaca tggacggctt cgagtggaac tacggcgcgc tcggcgaaaa caaacgcaag
     2761 ctggcgggcg tcttgttccg gcgcctcgcg cgccgtttcg ccaagagccc gctgctccac
     2821 tacggccagg gcaaatggta ccccggcgaa caactgccgc gctgggcgct cggttgcttc
     2881 tggcgcaagg acggcgagcc cgtctgggtg gatccgaagc gctacgcgga agacggcgcg
     2941 agcgacggca tgacggacga gcacgccggg cgcttcgtcg cgcggctcgc cgcgcgcctc
     3001 ggcgtcgacg ggcgtcacgc gcagccgggc tacgaagacg cgtactacta tctgctccgc
     3061 gaacggcggc tgcccgtcaa cgtcgacgtg ctcgacaatc ggctcgacga cgaaatggag
     3121 cgcgagcgcg tcgcgcgcgt gttcgagcgc gggctcaaaa aagcgatcgg tcacacgctg
     3181 ccgctgcggc cgatcggcgg cgggcgctgg gaatcgggca agtggttctt gcgccgtgag
     3241 cacctgttcc tcacgcccgg cgactcgccg atgggttacc ggctgccggt cgattcgctg
     3301 ccttgggtcg ccgagctcga ctacccctac gtgattccgc ccgatccctt cgacgagcag
     3361 aagccgctgc cgcgccgcgg tgaacggcgc gtgctccagc agcccgggga agcgcgcgaa
     3421 cgaggtgacg tggcgaagcc gcgtccgcgc gaatcggcgg cggacctcgt gcgcacggca
     3481 ctttgcgtcg agccacgcga cgggacgctg cacgtcttct tgccgcccgt cgcctacctc
     3541 gaggactacc tcgagctcgt cgccgccgtg gaagacgcgg cgacggagct cgactaccgc
     3601 gtgcgcatcg agggctacac gccgccctcg gacgcgcggc tcgagcgctt ctcggtgacg
     3661 cccgacccgg gcgtcatcga ggtgaacgtc catccgtcgt cgagcttcgc gtcgctcagc
     3721 aacgtgacga cgggcctcta cgaggaagcc cgcgagtcgc ggctcggcac cgagaagttc
     3781 atggtcgacg gccgccatac cggcacgggc ggcggcaacc acgtgacgct cggcgcggcg
     3841 acgcccgaga gcagcccgtt cttacgccgg cccgatctac tcgcgagcct gatcggctat
     3901 tggcacgatc atccggcgct gagctacctg ttttcgggga tgttcatcgg tccgacgagc
     3961 caggcgccgc gcgtcgacga agcgcggcac gaagccactc acgagctcga aatcgcgctc
     4021 ggtgtagcgc gcgagctcgg cgcgcgtccg ctcgcgccgt ggctcaccga ccgcgtgttc
     4081 cgtcacctgc tcgccgacgt caccggcaac acgcatcgca ccgagttctg catcgacaag
     4141 ctctactcac ccgacggtcc gaccggacgg ctcggcttgc tcgagctccg cgccttcgag
     4201 atgcccccgc acgcgaagat gagcatcgtt cagcagctgc tggtccgttc gctcgtgtcg
     4261 gccttttggc agcagccgta ccgcgcgaag ctgccgcgct ggggcacgca actgcacgac
     4321 cgtttcatgc tgccgcattt cgtcgaccaa gacttcggcg acgtgctgcg cgacctgggc
     4381 gagcgcggct acggcttcga tcggcgctgg ttcgacgcgc acttcgagtt ccgcttcccg
     4441 ctcgtcggca gcatcgcgca agagagcgtc gagctcgagg tgcggcgcgc gctcgagccg
     4501 tggcacgtct tgccagagga gacggacgcg ggcggcacgg cgcgcgccgt cgattcgtcg
     4561 ctcgagcgcg tgcaagtgcg gctgcgaggc gccgtgccgg gccggcattt ggtcgcgtgc
     4621 aacggggcgc tcgtgccgct gcacccgacg gggacgcaag gcgagtccgt tgcgggcgtg
     4681 cggttccgcg gctggcgtct gccgtcctcg ctccacccga ccataccggt gcacgcgcca
     4741 ctcgtgctgt cactgctcga cgcgtggacc gaacggcccc tcggcggctg cacggtgtac
     4801 gtgagccatc cgggcggtcg cgcgtacgac accttcccgg tcaatgcgat ggaagccgaa
     4861 tcgcgccgcg gagcgctgtt ctctcccttc ggccacgcgc acggcaaggt cgatccgaag
     4921 cgcctcgcgc ggctcgacaa tcccgactac ccgctgaccc tcgatttgcg tcggacgcgc
     4981 gcgtgatatc gtcacgccat gcgatcgcgg tttctcgagc gcgtggccgt cgcccttgga
     5041 ctcgtcctag ccgcgtgcgg ctcgaaatcg acgccgccgc cggacaccgc caagcaggcg
     5101 gcgatcgacg cgaccgcgcg gctcgccggc gactggcggc tcgtcgattt ccagcccacg
     5161 caaccgctcg agccgatgtt cgcgcagcta ctcgccgcgc agctgcgtca actcgtggtc
     5221 acgttccgcc ccggcacgat gcacatcgaa ggcgtcgggg tttcggcgga tcgcatcttt
     5281 acggtgacgt ccgccgcggc cgacggcttt tccgcgacga ttacggatcc gaccaacgtc
     5341 gtctatcaag tgaacggcgc gtttcagggg caacggctcg gcttcacctc ccttaccgat
     5401 ccttggcgcg gtcagggcac gctcgagcgc gtgcgctgat atgacgcaat cgcagtcaca
     5461 ggtgccgtcg taccccccgg aggggtttcg ctacgcgcag cgcccgtccg tctacgacga
     5521 ggccttcctt ccgagcggcg agccccgccc gcattacgcg gagctctggc acggcgtcga
     5581 agagctcggt ccgaccgaga tttcgaagcg ctgggagcag ggtcgcaggc tcattcgcga
     5641 aaacggcgtc acttacaacg tgtacggcga tccgcggggc atggatcgcc cgtgggtgct
     5701 cgatccgatc ccgctcgtgc tcgcggccaa ggagtggaac gagctcgcgc gcggactcga
     5761 tcagcgcgca cgcctcctga acgcgctcct caccgatctg tacggcgcgc aggcgacgtt
     5821 gcgcgagcgg ctcttgccga tcgagctcgt cttcggctgt ccggcgttcc tcaggccgct
     5881 ccacggcatc gaaccgccgg ggggcgtgta cctgcacctt tatgccgccg atctcgcgcg
     5941 cgggccggac ggcggtttct gggtgctcgg cgatcgcacg caggcgccgt cgggcgccgg
     6001 ttacgcgctc gaaaaccgca tcgtcgtgtc gcggcttttg tcgcagctgt tccgcgactg
     6061 taaggtcgag cggctcgcgc cttttttcag cgccttgcgt gaatccttgg cgagcctcgc
     6121 gccgcgcggg cgcgagcagc cgcgcgtcgt cttgctcacg ccgggcgcgt acaacgagac
     6181 ttacttcgag cacgcgtatc tcgcgcgcta tctcgggtat tcgctggtcg aaggtgcgga
     6241 tctcaccgtg cgcgaccaga ccgtgtacct gaagacgctc ggcgggctcg agcgcgtcga
     6301 cgtgatcctg cgccgcatgg acgacggctt ctgcgatccg ttgagcctcc gcagcgattc
     6361 gtcgctcggc atcgcggggc tcgtgcgcgc cgttcggcgc ggcaacgtga cgatcgcaaa
     6421 cgccctcggc tcggggctcg tcgaatcgcc cgcgctgctc gcgttcgtgc cggcgctctg
     6481 ccggcggctg ctcggcgagg agctcgagct gccctcggtc gcgacgtggt ggtgcggcga
     6541 agagccagcg ctccgctacg tcatcgatca tttgccggag ctcgtgatca agcccgcgtt
     6601 tttcggccct cacgcgccgg agcccgtgtt cggcggcgcc ctgtcggtcg aggagcgcgc
     6661 cgacctcgcg cggcgcatcc
//
LOCUS       DATIML010001197         5530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4874461, whole genome shotgun sequence.
ACCESSION   DATIML010001197 DATIML010000000
VERSION     DATIML010001197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5530
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4874461"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1135
                     /locus_tag="VLJ38_20700"
     CDS             <1..1135
                     /locus_tag="VLJ38_20700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42017.1"
                     /translation="RAMDSEIWDWPVGPGASGWTPSKEATTADPAVASFSPDFGEVFG
                     RSAASHLSMLPWYAGAASLWPLDTGLNLPPGELTALSRVPGSIDVFATGTQSPLWHAA
                     WPRRPGKCSFAATGSALAACQGIASTPASSLARSTTLGVFRTYTEEWLMRISNSPGNP
                     QFDFTYGHGDDVPIVGDWDGAGGVTAGVYRPATNEWRLRYSNTTGDPDVTFLYGEPGD
                     VPVTGDWSGAGITTVGIYRPSTSEWLLRNSNSAGDPDIAFVFGDPGDIPVVGDWNGSG
                     KTTIGVYQPDNWEWHLRYENAAGDPDLIVAYGSPGDIPVVGSWNGSGRSTIGVFRPPG
                     GEWNTSVEALWLLRYSNTPGYPDLVVSYGAAGDLPVVGTWWRR"
     gene            1714..3090
                     /locus_tag="VLJ38_20705"
     CDS             1714..3090
                     /locus_tag="VLJ38_20705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42018.1"
                     /translation="MSEAGDGGQAGAGASSAGQANDGGASAEPSGVVLVPRFSTRKWV
                     RSAHGGDLVLEEVLTGFASPTPPKTRVRRLTRTLETAVEWVAPDAQYIADFCEHPSGE
                     LSLVLRSSSFEFALVRLDAQLNLLQISTLHDPAVATDPHAAEAGVTELVANGLLNDAA
                     RIGASGELAVAVVVSSINAVIGYRAAFTAGEWARPERTLIEPPVGLTPFLPIGGSFDT
                     FGAIGEWFRAPLDLDENGNAYVAVWANPTRIRAHVQAFQDGLTPLPGDPTLPNAADSD
                     VLLTKLAPSGERLWSRVVGTEHEDEPYAIRAHAGLVAVAGRSRRFPSFDNTAWDALLC
                     VTTATGDATDAFTLELVASSILLGVDARPGGGFVVAGSDGWSQNPDGLSILSFGQKLL
                     LEVPALDRAPVRVELPAGPRHNELHAVMATTAGVAFAGHEDGPLTHSGDADASEIHAT
                     GVLGFVPR"
     gene            complement(3104..5002)
                     /locus_tag="VLJ38_20710"
     CDS             complement(3104..5002)
                     /locus_tag="VLJ38_20710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002638101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HSU42019.1"
                     /translation="MDDQAPTSSTPLHGRRQSLHTLALASLGVVFGDIGTSPLYAVRE
                     CLNRAHGIAASPQNVFGIVSLVFWALMLVISLKYVAYVLRADNAGEGGMLALTALATS
                     TARLKPWAHRVALMVGLFGASLLFGDGIITPAISVLSAVEGLGIAAPHLAPAILPLAT
                     LILLVLFGAQRHGTRRVGAIFGPIMLIWFLTLAVLGLLNIAQHPQILSAVSPTYAVGF
                     FTQNGKLGFLVLGSVFLVVTGGEALYADMGHFGARPIRTAWFCVALPTLLLNYFGQGA
                     LLLLRPQAIASPFYNLAPPAFLYPLVLLSTLATIIASQALISGAFSVTRQALMLGFLP
                     RVSIHHTSDEQIGQIYVPIVNWALMLAAIGAVWGFGSSSGLAAAYGVAVTLDMTITTL
                     LAYVVARMQWRWAITSALAVTIPLLCLELVFLSSNLTKVAHGGWFPLAIGALMFTLFT
                     TWRRGRQLLFEKIKERMVPLEDFFELMVVERPARVPGTAVYLTSNDTGTPPALLQGLL
                     HMRAVHEKVLLLTIVTEKIARIPNRERVEVIELQDGFTRAKARYGFMETPDVPQILQR
                     SEFENHSLEYVTFFLGRETVLPNREAGMALWRERLFAFLTRNAQPATAFFGIPPSRVV
                     EIGSQIEL"
     gene            5326..>5530
                     /locus_tag="VLJ38_20715"
     CDS             5326..>5530
                     /locus_tag="VLJ38_20715"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU42020.1"
                     /translation="MADDEPEVCELVEAGLARLGHQITSVKTGEQALELLGATEFDVL
                     LTDQSMDGMTGVELCRKALALRPH"
BASE COUNT          966 a         1771 c         1900 g          893 t
ORIGIN      
        1 tcgggcgatg gatagcgaaa tctgggattg gccggtcggg ccaggcgcgt cgggctggac
       61 acccagcaaa gaagcgacga cagcggatcc agccgttgcg agttttagcc cggatttcgg
      121 cgaggttttc ggccgcagcg cggcgtccca cctgagcatg ctgccgtggt acgccggtgc
      181 ggcttcattg tggccgctcg acacggggct gaacctgccc ccaggcgagc tcactgcgct
      241 ttcgcgggtg ccgggcagta tcgacgtttt cgcgacgggc acgcaaagtc cgctctggca
      301 cgcagcgtgg ccccgccgcc cggggaaatg ctccttcgcc gcgacgggat ctgccctggc
      361 cgcctgtcag gggatagcgt caacgcctgc gtcgagcctc gcacgctcga ccacgctcgg
      421 tgtcttccgc acgtacaccg aagaatggct catgcgcatc tcgaacagcc cggggaatcc
      481 tcaattcgac ttcacttacg gacacggcga cgacgtgccg atcgtgggcg actgggacgg
      541 agccgggggc gtaacggccg gcgtgtatcg gcccgcaacg aacgaatggc gtttgcgcta
      601 cagcaatacg accggcgatc ccgacgtcac cttcctctat ggcgagccag gcgacgtgcc
      661 ggtcacgggc gattggtcgg gtgccggtat aacgaccgtc ggcatttacc ggccgagtac
      721 gagcgaatgg ttgctacgaa atagcaacag cgcgggagat ccggacatcg cgttcgtgtt
      781 cggtgatccc ggagacatac ccgtcgtcgg cgattggaac ggctcgggca agaccacgat
      841 tggcgtctac cagccggaca attgggaatg gcacctccgc tacgaaaacg ctgcgggtga
      901 cccggatctc atcgtggcgt acggcagccc cggcgacatt ccggtcgtag gcagctggaa
      961 cggcagcggc cgttcgacga tcggcgtctt tcgtccgcct ggtggggagt ggaacacgag
     1021 cgtcgaagcc ctatggttgc ttcgctacag caacacgccc ggatatccgg acctggtcgt
     1081 aagttacggc gcggccggtg atctacccgt cgtcggcact tggtggcggc gctgacgcgc
     1141 gcggccgccg tcggcgacca gccggtggtc ggtccgtggc gacgacacta ggctgaaccg
     1201 gtaaagcgcg gcccgctgcg gtcgcgccgc gcttaccgcc ggcctcgcta gcattcgagc
     1261 ccttgaccac cgagggtgcg ggcccaaggt gtcttccgct tgttgcgtgt gcgtcggcgt
     1321 ccgtccgcac gagctggact tgcgcgcgcc tgcgttcagg atggcatgag gattttcgtc
     1381 cgcggtcgcg cgacatggct cgggatcacg ctcgttttcg agctcggttg cggagacggc
     1441 acgtcgcacg tggtgcgggc ggtagcagga cgcgcatcag tcgctccgcc ccaagccgag
     1501 ggtggcgcta gtggggacgc taccgctgct ctaggacctg cggcgggcgg ggaccacgcc
     1561 gccggcggaa gacatgctgc cggtgggcaa ctagcggtcg gcggcggcga tccgatccat
     1621 tccggtggct ccgccggtcg ttcgagcgag gtcgcgggcg ggcgtcgcgg acaggagcac
     1681 ggatccgcgg gagaggaagc gggcaccggc gcggtgagtg aggctggtga cggcggacaa
     1741 gcgggagccg gcgcgagctc cgccgggcaa gcgaatgacg gcggcgcgag cgccgagccg
     1801 tccggcgtcg ttctcgttcc ccgcttctcg acgcgaaagt gggtccgttc agcgcacggc
     1861 ggcgacctcg tcctcgaaga agtgttgacg ggcttcgcgt cgccgacccc gccgaaaaca
     1921 cgcgtgagac gcctgactcg aactctcgaa actgccgtcg aatgggtcgc accggacgct
     1981 caatacatcg cggatttctg cgaacaccct tcgggcgagc tctcgctcgt gctccgctct
     2041 tcgtcgttcg agttcgcgct ggttcgactc gacgcgcagc tcaatttact ccaaatctcg
     2101 acgctccacg atccggccgt cgctacggat ccgcacgccg ccgaggcggg cgtgaccgag
     2161 ctcgtcgcca atggcttgct caacgacgcg gcgcgcatcg gcgcgtcggg tgagctcgca
     2221 gtcgccgtcg tcgtgtcgtc catcaacgca gtcatcggct accgcgcagc gttcaccgcg
     2281 ggcgagtggg cgcgaccgga gcgcacgttg atcgagccgc ccgtcgggct cacgccgttt
     2341 ctccccatcg gcgggagctt cgacaccttc ggagccatcg gggagtggtt ccgcgcgccg
     2401 ctcgacctcg acgagaacgg caacgcctac gtcgcggtct gggcgaaccc cacgcggatt
     2461 cgggctcacg ttcaggcgtt tcaagacggc ctgacgccgc tgccgggcga tccgacgttg
     2521 ccgaacgcgg ccgactcgga cgtgctcctc acgaagctcg cgccgagcgg cgagcggctc
     2581 tggtcgcgcg tcgtcggcac cgagcacgag gacgaaccct acgccatccg cgcccacgcc
     2641 ggactcgtgg ccgtcgcggg ccgctcccgg cgctttccga gcttcgacaa caccgcgtgg
     2701 gacgccctcc tctgcgtgac cacggccacg ggcgacgcga ccgacgcgtt caccctggag
     2761 ctcgtcgcgt cgagcatttt gctcggcgtg gacgcgcgcc ccggcggagg cttcgtcgtc
     2821 gcgggcagcg acggctggtc gcaaaatccc gacggcttga gcatcctctc gttcggccaa
     2881 aagctcttgc tcgaagtgcc ggcgctcgac cgagctccgg tccgtgtcga gctgcctgcc
     2941 ggcccgcggc acaacgagct gcacgcggtc atggctacga ccgcgggcgt cgccttcgcc
     3001 ggccacgaag acggccccct cacccactcc ggtgacgcgg acgcgtccga aattcacgcg
     3061 acgggcgtgc tcggcttcgt gccgagatga ctgcgacgtc ccgctaaagc tcgatctgag
     3121 aaccgatctc gacgacgcgg ctcggcggga tgccgaagaa ggccgtcgcg ggctgggcat
     3181 tgcgcgtgag aaacgcgaac aggcgctcgc gccaaagcgc cattcccgct tcccggttcg
     3241 gcagcaccgt ctcacgaccg agaaaaaagg tgacgtattc gagcgagtgg ttctcgaact
     3301 ccgagcgctg gaggatttgc ggcacgtccg gcgtttccat gaagccgtag cgtgccttcg
     3361 cgcgcgtaaa gccgtcctgg agctcaatta cttcgacgcg ctcgcggttc gggatgcgcg
     3421 cgatcttttc cgtgacgata gtgagcagta acaccttttc gtgtacggcg cgcatgtgca
     3481 agaggccctg caggagcgcc ggaggcgtgc ccgtgtcgtt gctcgtcagg tacacggccg
     3541 ttccagggac acgcgccggg cgctcgacga ccatgagctc gaagaagtcc tcgagcggga
     3601 ccatgcgctc tttgatcttc tcgaacagga gctgccggcc tcggcgccag gtcgtgaaga
     3661 gcgtgaacat caacgcgccg atcgcgagcg gaaaccaacc gccgtgggcg accttcgtca
     3721 ggttcgagct caagaagacg agctcgaggc agagcagggg gatcgtgacc gcgagcgcgg
     3781 aagtgatggc ccagcgccat tgcatgcgcg caacgacgta ggctaggagc gtcgttatcg
     3841 tcatatcgag tgtcacggcg acaccatagg ccgcggcgag tccactcgaa ctaccgaagc
     3901 cccacacggc gccgatggcg gccagcatca aggcccagtt gacgatgggc acgtagattt
     3961 gcccgatctg ctcgtcggag gtgtgatgga tgctgacgcg cggcaaaaag cccaacatga
     4021 gcgcctgtcg cgtgaccgag aaggcgcctg aaatcagcgc ttgtgacgcg atgatcgtgg
     4081 cgagcgtcga gagcagcacg agcggataga ggaacgccgg aggcgcaagg ttgtaaaatg
     4141 ggctcgcgat ggcttgcggg cgcagcaaga ggagcgcgcc ttggccgaag tagttgagca
     4201 ggagcgtggg cagcgccacg caaaaccagg ccgtgcgaat cggcctcgcg ccgaaatggc
     4261 ccatgtcggc gtagagcgcc tcgccgcccg tgacgacgag aaacacggag ccgagcacga
     4321 ggaagccgag cttgccgttc tgagtgaaga agccgacagc gtaggtcggg ctcaccgcgc
     4381 tcaggatttg cggatgctgc gcgatgttga gcaagccgag cacggccaag gtcaaaaacc
     4441 aaatcaacat gatcggtccg aagatggcgc cgacgcgccg cgtaccgtgg cgttgcgcgc
     4501 cgaacaggac gaggagtatc agcgtcgcga gcgggaggat ggccggcgcc aagtgaggcg
     4561 cggcgatgcc gaggccctcc acggcgctca gcaccgagat ggcgggcgtg atgatgccgt
     4621 cgccgaagag cagcgacgcg ccgaacaaac cgaccatcag cgccacgcga tgcgcccacg
     4681 gtttgagcct ggcggtcgac gtagcgagcg cggtaagcgc aagcataccg ccctcaccgg
     4741 cgttgtcggc gcgcagtacg taagcgacgt acttgagcga gatcacgagc attagcgccc
     4801 agaatacgag cgaaacgatg ccgaatacgt tttgcggact cgccgcgatc ccgtgcgcac
     4861 gattgaggca ctcgcgcacc gcgtagagcg ggctcgtgcc gatatcaccg aagacgacgc
     4921 cgagcgatgc gagtgcaagc gtgtgcaggg attggcgacg gccgtgcagc ggggtgctcg
     4981 acgtcggtgc ttggtcatcc atggaggcgt ccgggtcggt cttgcgctcc gcgagctcgc
     5041 atgcggcggc tgacctccac cattatcttg ccggctgcga ctgcgctact ttcgtccttg
     5101 aactagggca aatcgggcgt gccggcggac ttcctggact tgctcctatc caactgaggt
     5161 cggcggcatc tcgagcagcc gcgaaactgg cggcagagta tctcgagtcg gcggaagccg
     5221 tcagccgcgg ggcgacacgc tgctgcggcg tgctaggctc ggcgccaaat cgaccaggac
     5281 gctccgcgcc tgtcgagacg gagtcatgtg cacgcaaaaa ttctgatggc agacgacgag
     5341 cccgaggttt gcgagctcgt tgaagcgggg ctcgctcgcc tgggccatca gattacgagc
     5401 gtcaagacgg gtgaacaggc actcgagctg ctcggagcga ccgagttcga cgttttgctc
     5461 accgaccaat cgatggacgg gatgacgggc gtggagcttt gtcgcaaggc tctcgcgctc
     5521 cggccacacc
//
LOCUS       DATIML010001198         4000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5454212, whole genome shotgun sequence.
ACCESSION   DATIML010001198 DATIML010000000
VERSION     DATIML010001198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4000
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5454212"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>4000)
                     /locus_tag="VLJ38_20720"
     CDS             complement(<1..>4000)
                     /locus_tag="VLJ38_20720"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU42021.1"
                     /translation="LARAEWPKVRGVLEARLEVASDPDSRRDLLTRLAHLYEEQQEDY
                     RSALETTAKLFHEDLSDVKAMGELERLARVAGAEQRLAEIYASELEQTTGDDGTTAKL
                     ARRTGELFDHIGQPMRALAFYRRALDFEPENKALFEAIDKILVREGLHEERVKLHRQA
                     LDHRFEPSERLALLHTIAGLERRELGRLDDAIDTYRAALELEERDALALDALVELYRE
                     RERWDDLAELYLRRAELAERPEQGAVFRLALARLHLKLGQTERAVDQLEEIVRTDPRH
                     PEAIAELDALRQTDGLKERVVEILRPLYQATDDWRKLVQLNEDRFALAHGSEKVTVLR
                     ETAELWEKRGNDKKRARRANGTALRLDPDDGDVRAEYERLAAETKAWDELATTYEEIL
                     GEHPTLGSLREYYAVLARVHDKERDDPRRALWAYDQLYAADPSDTSTLDAMERLATLL
                     SDWPALVSVLSAKAEAVFGDEERASLLRRVGEVKRDLLDDRAGAIVAYSRASELDPTS
                     AFTVDCLIELYEAENHPARLVELYERRVELSGDEDAELKYALLVAAAKVYESKLEDRQ
                     RAIEALVRALGNKPGDNDVLATLDRLYRAEGMWSELLDNLRTQVGLASTAAERSALHK
                     SMGQVLADKLSSQEDALEEYRQALDQDPSDNEAVERAMALGEGNESLRHRTAEILVPV
                     LRQTERWEKLVAVLELRLSAESEAMERTQTLWAIAEVLEGKLGKPAEAETVLLRALTE
                     RPEAEDLHAEIARLAEAGGSWQRYADALSERAVTTFEPEISRELYVRLGQVAEERLGD
                     KNRAIAAYEKAVEQAGDQPELLAALDRLYVAAKELDKVADILERRVGVEFDAGLQAGL
                     FHRLAELQVDHLGDSARALGSLRSALERVPAHPGAVGLLEKLAQEPELFDEAAEILEG
                     VYRAQNDTAKLAGLYEKRVEFAEGPEARTEMRLRLAQVLEQDARDAARGQRVLEQGLA
                     ETPGDPTLLEEIERLATVTGGFANASSALERAIEEHRDGIAPELACSLSLRLARWLRD
                     RAGDPVGAEAALVRGLAFDPVNDEILEQLEDLQRGSGRARDLVETLRRRAKLTPDEDR
                     RAEFYRQAKVLAEGIGDRQLAEALLRELLEQDDMNRWALSELATLSEASGNYKEAFAL
                     FVRQAEVESDASEVRRLRRQAAVTARDKLGDRERAIELFEQIFEDDPSDLDAAGALRT
                     LLASAERLQELGRLLERLIDLSDSPEKRSELRLELAKLNAEKFGSTDTAIDLVRAVLE
                     DDPGRADAVVVLSELYEKTQRDEELAELLSSQIDAARARGDAQAELRFQVRLGEIYET
                     RLNDRARAIETY"
BASE COUNT          539 a         1388 c         1375 g          698 t
ORIGIN      
        1 tggtaggtct cgatcgcacg cgcccgatcg ttgaggcgcg tctcgtagat ttcgccgagc
       61 cgcacctgga agcgcagctc cgcctgagcg tcgccgcgag cgcgagcggc gtcgatctgc
      121 gacgacaaga gctcggccag ctcctcgtcg cgctgcgtct tttcatacag ctcgctcagc
      181 acgaccacgg catcggcccg gcccggatcg tcctcgagca cggcacgcac gagatcgatc
      241 gccgtgtccg tcgacccgaa cttctcggcg ttcagcttgg cgagctcgag ccggagctcg
      301 ctgcgctttt ccgggctgtc gctgagatcg atcagccgtt cgagcaggcg cccgagctcc
      361 tgcaaccgct cggccgacgc gagcagcgtc cggagcgcgc ccgcggcatc gagatcgctc
      421 ggatcgtctt cgaagatttg ctcgaagagc tcgatggcgc gctcgcggtc gccgagcttg
      481 tcgcgcgccg tgaccgccgc ttggcggcgc agccggcgta cttcgctcgc gtcgctctcg
      541 acctccgcct ggcgtacgaa gagcgcgaag gcctccttgt aattgccgga ggcttccgac
      601 aaggtcgcga gctccgacag cgcccagcga ttcatgtcgt cctgctccag tagctcgcgc
      661 aggagcgctt ccgcgagctg ccgatcgccg atgccttcgg cgagcacctt ggcttgccga
      721 taaaactccg cgcgccgatc ctcgtcgggc gtgagcttgg cgcggcggcg cagcgtctcg
      781 acgaggtcgc gcgcgcggcc ggagccacgc tgcaggtcct cgagttgctc gagaatttcg
      841 tcattgaccg gatcgaacgc gaggccgcgc acgagcgccg cttccgcccc caccggatcg
      901 ccggcgcgat cacgcagcca gcgcgcgagc ctgagcgaca gcgagcaggc gagctccggc
      961 gcgatgccgt cgcggtgttc ttcgatcgca cgctctagcg cgctcgaggc attcgcgaag
     1021 ccccccgtca ccgtcgcgag ccgctcgatt tcttcgagca gcgtcgggtc accgggtgtt
     1081 tcggcgaggc cctgttcgag cacgcgctga ccgcgcgccg cgtcgcgcgc gtcctgctcg
     1141 agcacttgcg cgagccgcaa gcgcatttcg gtgcgcgcct ccgggccctc ggcgaattcg
     1201 acgcgtttct cgtagagacc ggcgagcttg gcggtgtcgt tttgagcccg gtacacgccc
     1261 tcgagaattt cggccgcttc gtcgaagagc tcgggttctt gggcgagctt ttcgagcagg
     1321 cccaccgcac ccgggtgggc cggcacgcgt tcgagggccg aacgaagcga gccgagcgcg
     1381 cgcgccgaat cgcccaggtg gtccacctgc agctcggcga ggcggtggaa gaggcccgct
     1441 tgcaagccgg cgtcgaactc gacgcccacg cggcgttcga gaatgtcggc gaccttgtct
     1501 agctccttcg cggcgacgta gaggcggtcg agcgcggcga gcagctccgg ttgatcgccc
     1561 gcttgctcga cggccttttc atacgcggcg atcgcgcggt tcttgtcgcc gagccgctct
     1621 tcggcgactt ggccgagccg aacgtagagc tcgcgcgaga tctcgggttc gaacgtcgtg
     1681 acggcgcgtt ccgacagggc gtcggcgtag cgttgccagc tgccgcccgc ttccgcgagg
     1741 cgcgcgatct cggcgtgcag atcctcggcc tcggggcgct cggtgagcgc gcgcagcagc
     1801 acggtctccg cctcggccgg cttgccgagt ttgccctcga gcacctcggc gatggcccac
     1861 agggtctgcg tgcgctccat ggcctccgac tccgccgaga ggcggagctc gagcacggcc
     1921 acgagttttt cccagcgttc cgtctggcgc agcacgggca cgaggatctc ggccgtacgg
     1981 tggcgcaagg actcgttgcc ctcaccgagc gccatcgccc gctcgacggc ctcgttgtcg
     2041 ctcggatctt gatcgagcgc ctggcgatat tcctcgagcg cgtcctcttg gctcgagagc
     2101 ttgtcggcca gcacctgccc catcgacttg tgcagggcgg agcgctcggc cgcggtgctg
     2161 gcgagcccga cttgggtgcg caaattgtcg agcagctccg accacatgcc ctcggcgcgg
     2221 tagaggcgat cgagcgtcgc gagcacgtcg ttgtcgcccg gcttgttacc gagcgcccgc
     2281 acgagcgcct cgatcgcgcg ctgccgatcc tcgagtttgc tctcgtacac cttggccgcg
     2341 gcaacgagca gggcgtactt gagctcggcg tcctcgtcgc cgctcagctc gacacggcgc
     2401 tcgtagagct cgaccagccg cgccgggtga ttttccgcct cgtagagctc gatcaggcaa
     2461 tcgacggtga acgcgctggt cgggtcgagc tcgctcgcac gcgaataggc gacgatcgcg
     2521 cccgctcggt cgtcgagcag atcgcgcttc acctcgccca cgcggcgcag cagcgacgct
     2581 cgctcctcgt cgccgaagac ggcttcggct ttggcggaga gcacgctcac gagcgcgggc
     2641 cagtcactga gcagcgtggc gagccgctcc atggcatcga gcgtgctcgt gtcggacgga
     2701 tcggccgcgt agagctggtc gtaggcccag agcgcgcggc gcggatcgtc gcgttccttg
     2761 tcgtgaacgc gcgccagcac cgcgtaatac tcgcgcaggc tgccgagagt cgggtgttcg
     2821 ccgaggatct cctcgtaggt cgtcgcgagc tcgtcccagg ccttcgtttc ggcggcgagg
     2881 cgctcgtact cggcgcgcac gtcgccgtcg tcgggatcga gccggagggc cgtgccgttg
     2941 gcgcggcgcg cgcgcttttt gtcgttgccg cgcttttccc agagctcggc ggtttcgcgc
     3001 agcaccgtca ccttttcgct gccgtgcgcg agcgcaaagc gatcttcatt gagctggacg
     3061 agctttcgcc agtcgtcggt ggcctggtag agcggccgca ggatctcgac gacgcgctcc
     3121 ttcaagccgt ccgtctgccg caacgcatcg agctccgcga tggcttcggg gtgccgcggg
     3181 tccgtgcgca cgatctcctc gagttgatcg acggcgcgct cggtctggcc gagcttcaaa
     3241 tgcaagcggg cgagcgccaa gcggaacacc gcgccctgct ccggacgctc cgccagctcg
     3301 gcgcgacgca agtagagctc ggcgagatcg tcccagcgct cgcgttcgcg atagagctcg
     3361 acgagagcgt cgagcgcaag tgcgtcgcgc tcctcgagct cgagcgcggc gcggtaggtg
     3421 tcgatcgcgt cgtcgagacg gccgagctcg cgccgttcga ggccggcgat ggtgtgcaag
     3481 agcgcgagcc gctccgacgg ttcgaaacgg tgatcgagcg cttggcggtg gagcttcacg
     3541 cgctcctcgt gcaggccttc gcgcacgagg atcttgtcga tggcctcgaa gagcgccttg
     3601 ttctccggct cgaagtcgag cgcacgccgg tagaacgcga gcgcgcgcat cggttgcccg
     3661 atgtggtcga agagctcgcc cgtgcggcgc gcgagcttcg cggtcgtccc gtcgtcgccg
     3721 gtcgtctgct cgagctcgct cgcgtaaatc tcggcgagtc gctgctcggc gccggccacg
     3781 cgcgcgagcc gctcgagctc gcccatggcc ttcacgtccg agagatcctc gtggaagagc
     3841 ttggcggtcg tctcgagcgc gctcctgtag tcctcctgct gctcctcgta gaggtgcgcg
     3901 aggcgcgtca ggaggtcgcg gcgcgagtcg ggatcggacg cgacctcgag tcgtgcctcg
     3961 agcacgccgc gcaccttcgg ccactcggca cgcgcgaggt
//
LOCUS       DATIML010001199         1772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2849848, whole genome shotgun sequence.
ACCESSION   DATIML010001199 DATIML010000000
VERSION     DATIML010001199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2849848"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1523)
                     /locus_tag="VLJ38_20725"
     CDS             complement(<1..1523)
                     /locus_tag="VLJ38_20725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSU42022.1"
                     /translation="MPLRIEDYAIVGDTQTVALVGRDGSFDWMCVPRFDSGACFAALL
                     GGPEHGRWLIAPRGADPARTTRAYRDGTLVLETTFTTPEGRVKVIDCMPPRDRTPDVV
                     RVVEGLDGAVPMRMELVARFDYGSVLPWVRRTADRRLRFIAGADSLYLHTDFETRGED
                     LTTVADFTVRAGQRLHAVLSWQSSHEELPPPPDAEKALADTEAWWREWSSRCSYEGPY
                     RSAVYSSLLVLKALTYAPTGGIVAAPTTSLPEQLGGTRNWDYRYCWLRDATFTLYALT
                     LGGYESEAAAWRDWLLRAVAGDPAKLQIMYGLGGERRIAEYELDWLPGYASSRPVRAG
                     NAAVGQLQLDVYGEVIDALFQTRRAGIPPDPASWNVERALLDFLEGAWQKPDDGIWET
                     RGPRQHFTHSKVMTWVAFDRAVKSVEQARLPGPVERWRALRDQIHADVCAHGWNASKG
                     AFTQAYGSEHLDASLLLIPEVGFLPVQDPRVIGTIAAVERELVKEGFVQRYPTRGQDG
                     "
BASE COUNT          289 a          605 c          600 g          278 t
ORIGIN      
        1 ccgtcctgcc cgcgtgtcgg gtagcgttgg acgaagccct ccttcacgag ctcgcgctcg
       61 acggccgcga tggtgcctat caccctcgga tcctgcaccg gcagaaatcc gacttccggg
      121 atgagcagta agctcgcatc caggtgttcc gagccgtagg cctgcgtgaa ggcacctttg
      181 ctcgcgttcc agccgtgcgc gcaaacgtca gcgtggattt ggtcgcgcag cgcgcgccag
      241 cgctcgacgg gacccggcag gcgggcttgc tcgacgctct tcacggcccg gtcgaaggcg
      301 acccaggtca tgaccttgga gtgcgtgaaa tgctggcgcg ggccccgcgt ctcccagatg
      361 ccgtcgtcgg gcttctgcca ggcgccttcg agaaagtcga gcagcgcgcg ctccacgttc
      421 caggacgccg gatcgggcgg gatccccgca cgtcgcgtct gaaacaaagc atcgatgact
      481 tcgccgtaca cgtcgagctg caattgcccg acggccgcat tgcctgcgcg caccgggcgc
      541 gagctcgcgt agcccggtag ccagtcgagc tcgtactcgg cgatgcgccg ctcgccgccg
      601 agcccgtaca tgatctgcag cttcgccgga tcgccggcca cggcgcgcaa gagccaatcg
      661 cgccaagcgg ccgcctcgga ctcgtaaccc ccgagagtta gcgcatacag cgtgaacgtc
      721 gcgtcgcgca gccaacagta gcggtagtcc caattgcgcg tgccgccgag ctgttcgggc
      781 aaggacgtcg tcggcgcagc gacgatgccg cccgtcggcg catacgtgag cgccttgagc
      841 acgagcagcg acgaatacac ggcgcttcga tacggaccct cgtacgagca gcggctcgac
      901 cattcgcgcc accacgcctc cgtgtcggcg agtgccttct ccgcgtcggg cggcggcggg
      961 agctcttcgt gcgacgactg ccacgagagc acggcgtgga gtcgctgtcc ggcgcgcacc
     1021 gtgaagtccg cgacggtcgt cagatcttcg ccgcgcgttt cgaaatcggt gtgcaggtag
     1081 agcgagtcgg cgccggcaat gaagcggagc cggcggtcag ccgtgcgtcg gacccagggc
     1141 agcacggagc cgtagtcgaa acgcgcgacg agctccatgc gcatggggac ggcgccgtcc
     1201 agcccttcca cgacgcgcac gacgtccggt gtgcgatcgc gcggcggcat gcaatcgatc
     1261 actttgacgc ggccttcggg ggtcgtgaac gtcgtctcga gcaccaacgt gccgtcgcgg
     1321 tacgcgcgcg tcgtgcgcgc ggggtcggcg ccgcgcggcg cgatgagcca gcgtccgtgc
     1381 tccggtccgc cgagcaacgc tgcgaagcaa gcgccggaat cgaagcgtgg gacacacatc
     1441 caatcgaacg acccgtcgcg cccgacgagc gccaccgtct gagtgtcacc gacgatcgcg
     1501 tagtcctcga tgcgcagggg cattcgtcgt ccggcgacac gggggatgca cgcgccgcgc
     1561 cagtgaagct tccaccgcgg aaatacggaa atagttgcgc gtggtcacgc acctcaggcg
     1621 aggaattatg cccctgcgtg gtaaatcggc cgctatgacg tggtcgcgat cagcgttggc
     1681 agcgctcgtc atggcccgac gctactcgtt accgcgcggc tcgaacgcgc gcgcgacggt
     1741 tacgttgcgg cgaatgtcgt ccgtcgcgtg ct
//
LOCUS       DATIML010001200         3303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4000198, whole genome shotgun sequence.
ACCESSION   DATIML010001200 DATIML010000000
VERSION     DATIML010001200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3303
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4000198"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /locus_tag="VLJ38_20730"
     CDS             complement(<1..957)
                     /locus_tag="VLJ38_20730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42023.1"
                     /translation="MWRGRLGVAFAFLLWSRAGFALEANPRVALGLTRGEGTQSCIQA
                     GAVERAVERRLRRHVFARNEPPDLHIDVALAREADGAWSARLVLRGRSGAELGARELE
                     THAAHCSALDDALVLVVALLVDSPEARAQASAASEPAAPAPSEATRSTKATPPASRET
                     RLELPPETYAPREPYRFEVAANVVAAAGVLPGVSFGGEVVLGVRPPHFIELRLRPAAL
                     LAQSAHAPTPDRGGRFSLLSVALDACPLDNSFGQLRLSGCLGQRVGRMTAAGFGYQRN
                     ASSQELYYALGVSAAASFWFGPRVGIRVGLDVEAPLTRDSYFS"
     gene            complement(973..2148)
                     /locus_tag="VLJ38_20735"
     CDS             complement(973..2148)
                     /locus_tag="VLJ38_20735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42024.1"
                     /translation="MTLSTRSSGGTARLRPSTLLRRSPTLTIASLLALATAMSTVACG
                     SSSGGAGHTAGSTAAEAGQGGDGSVGVGGSASGSTGNRGGTSSGGSGNAASNGGSSSA
                     TNGASGGNDTSGGSTSTGGTDAIAGSGTVAGSAGSATLGTTQCSDGIDNDGDGLIDGL
                     DPECTGPWDNDEGSFATGIPGDNQDPKWQDCFFDGNSGAGDDGCRYATSCLYGTTAQD
                     DPSCTLSQQCMDFCGALTPNGCDCFGCCTVQAADGSSVDIYEVSSCSIAQLDDTKACP
                     RCTKNTQCQNTCGECELCPGKTVADLPASCTPPTTGTGGTSGTGGSSDTGGTSGTSGT
                     GGTSGTGGTSDTGGTGGAPPPPPAYTCDGGAQVCGPGVAACPASYYCSQGCCLVVVR"
     gene            complement(2263..>3303)
                     /locus_tag="VLJ38_20740"
     CDS             complement(2263..>3303)
                     /locus_tag="VLJ38_20740"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSU42025.1"
                     /translation="LPGLLLAREQLERAEKVLGALLSHQRGGLLPAIVPKPGVRRARP
                     LPDATLWLFETTRLLLARRGPRDRFIAETVFPALTRAFLRFTSRRLRRFVWCSSDGLL
                     VTSDAAVALTWMDAQVNGKPVTPRPGIAVEHQALFTRGADLLATLASFYGHDALAARA
                     NKDANRARNAFRSRFWCDETDYPYDCVSEARDRSDSWADASVRPNALTALAVDPTLFE
                     DWQAEAILRRVQSELLTPQGLRSLSPQDPRYMGHFGGNLAEREFAYHQGTAWTHLLGH
                     YARAAHQRWGDEPQGRDELVRLLEHVVDSGPLFGQLAQLSDGDEPFRPRACPAQATAV
                     AEILRALVELGG"
BASE COUNT          520 a         1149 c         1164 g          470 t
ORIGIN      
        1 cgaaaagtaa ctgtcgcgag tgagcggcgc ctccacgtcg aggccgacgc gaatgccgac
       61 ccggggcccg aaccaaaatg aagcagcggc tgacacccct agcgcatagt agagctcttg
      121 tgagctcgca ttccgctgat agccgaaacc agcggcggtc atgcggccaa cgcgctgccc
      181 cagacagcca gagagccgca actggccgaa cgaattgtcg aggggacagg cgtcgagtgc
      241 cacgctgagg agtgaaaatc gaccaccgcg atccggcgtc ggcgcatggg cgctttgtgc
      301 caggagcgcg gccgggcgca agcggagctc gatgaaatgg ggcggccgca cgccgagcac
      361 gacctccccg ccgaacgaaa cgcccggcag cacgccggcg gcggcgacga cgttcgcagc
      421 gacttcgaag cgatacggct cgcgcggcgc gtacgtctcg ggcggtaact cgaggcgcgt
      481 ctcgcgcgaa gctggcggcg tcgctttcgt tgaccgcgtg gcttcgctcg gcgcgggtgc
      541 cgccggctcc gacgcggcgc tcgcctgggc gcgagcctcc ggcgaatcga cgagcagcgc
      601 cacgacgaga accagcgcgt catcgagagc cgagcagtgc gccgcgtgcg tttcgagctc
      661 acgcgcgccg agctcggcgc cgctccgtcc gcgcagcacg agtcgcgccg accaggcgcc
      721 gtcggcttca cgcgcgagcg ccacgtcgat atgcagatcg ggcggctcgt tccgggcgaa
      781 cacgtgccgc cgcagtcgcc gctcgacggc acgctcgacg gcaccagcct gaatgcagct
      841 ttgggtgccc tcgccgcgcg tcagccccaa cgccacgcgc ggattcgcct cgagcgcgaa
      901 cccagcgcgt gaccagagca agaaagcgaa agcaacgccg aggcgcccgc gccacatggc
      961 gcgagcagct tatcagcgca cgaccaccaa acagcaaccc tgggagcagt aatacgatgc
     1021 cgggcacgcg gccacgcccg gcccgcacac ctgtgcgcca ccgtcgcacg tgtatgcggg
     1081 aggcggcggg ggcgcgccgc ccgtaccgcc ggtgtcgctc gtacccccgg taccgctcgt
     1141 gcccccggta ccgctcgtgc cgctcgtacc gccggtatcg ctcgaaccgc ccgttccact
     1201 cgtgccgccc gtacccgtcg tgggcggcgt gcaactcgcc ggcagatccg ccacggtctt
     1261 gcccgggcag agctcgcact cgccgcaggt gttttgacat tgcgtgttct tcgtgcagcg
     1321 cggacaggcc ttggtgtcat cgagttgcgc gatcgagcag ctcgagacct cgtaaatgtc
     1381 gacgctcgag ccgtccgcgg cttgaaccgt gcagcaaccg aagcagtcac agccgttcgg
     1441 ggtgagcgcg ccgcagaaat ccatgcactg ttgcgacagg gtgcagctcg ggtcgtcttg
     1501 ggcggtcgtg ccgtacaagc aagacgtggc gtagcggcag ccgtcgtcgc ccgcgcccga
     1561 gttgccgtcg aagaagcagt cttgccactt cgggtcctgg ttgtcgccgg gaatacccgt
     1621 cgcgaacgag ccttcgtcgt tgtcccacgg gcccgtgcac tccggatcga ggccgtcgat
     1681 gaggccgtcg ccgtcgttgt cgatgccgtc gctgcactgc gtggtgccga gcgttgcgct
     1741 gcccgcgctg ccggcgacgg ttccgctgcc ggcaatcgcg tcggtgccgc ctgtcgaggt
     1801 cgagccgcca ctcgtgtcgt tgccgccgct cgcgccgttc gtcgcgctgc tgctaccgcc
     1861 gttcgatgca gcgttgccgc tcccgccgct cgaggtcccg ccgcgattgc ccgtcgagcc
     1921 cgaagccgag ccgccgacgc cgaccgagcc gtcgccgccc tggccggctt ccgcggcggt
     1981 actgccggcc gtgtgtcccg cgccgccgct cgagctgccg cacgcgacgg tagacatcgc
     2041 ggtcgcgagc gcaaggagcg acgcgatggt gagcgtgggc gagcgacgca gcagcgtgct
     2101 cgggcgaagg cgtgccgtgc cgccggacga acgagtggaa agggtcatcg tggagtcagt
     2161 ggaacggctc ctccattttt atgataagcg ccgcacttgt tcggccgggc gccctgaggt
     2221 cacacccatc gcggccaagc gcaggtggga taaggtggtc ggctaaccgc cgagctcgac
     2281 cagtgcgcgc aagatttcgg cgacggcggt cgcttgcgcc ggacaggcgc gggggcgaaa
     2341 cggctcgtcg ccgtccgaga gctgcgcgag ttgcccgaag agcggcccgc tgtcgacgac
     2401 gtgctcgagc aggcgcacga gctcgtcgcg gccctgcggt tcgtcacccc agcgttggtg
     2461 cgccgcgcgc gcgtagtggc cgagcaggtg cgtccaagcc gtgccctggt gataagcgaa
     2521 ttcgcgctcg gcgaggttac cgccgaagtg acccatgtag cgcgggtctt gtggcgagag
     2581 actgcgcagg ccctgcggcg tgagcagctc ggactgcacg cgccgcaaaa tagcttcggc
     2641 ctgccaatcc tcgaacagcg tggggtcgac ggcgagcgcc gtgagcgcgt tcgggcgcac
     2701 gctcgcgtcc gcccaggagt cggagcggtc gcgcgcctcg ctcacgcagt cgtacggata
     2761 gtcggtttcg tcgcaccaga agcgagagcg gaacgcgttg cgggcgcgat tggcgtcttt
     2821 gttcgcgcgc gcggcgagcg cgtcgtgccc gtaaaagctc gcgagcgtcg cgagcagatc
     2881 cgcgccgcgc gtgaagagcg cctggtgttc gacggcgatc ccgggacgcg gcgtcacggg
     2941 cttgccgttc acctgcgcgt ccatccaagt gagcgcgacg gcagcgtcgc tcgtgacgag
     3001 caggccgtcg gacgagcacc agacgaaccg acgcaggcgc cggctcgtga aacgcaagaa
     3061 agcacgcgtg agcgcgggaa acaccgtctc cgcgatgaag cggtcacgcg ggccgcgccg
     3121 cgccaagagc aagcgcgtgg tctcgaacag ccacagcgtc gcatccggca aggggcgcgc
     3181 gcgccgcacg cccggcttcg gcacgatcgc cggtaagaga ccgccgcgct gatggctgag
     3241 cagcgcgccg agcacttttt ccgcgcgctc gagctgctcg cgcgcgagca gcaagccggg
     3301 cag
//
LOCUS       DATIML010001201         5089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3139773, whole genome shotgun sequence.
ACCESSION   DATIML010001201 DATIML010000000
VERSION     DATIML010001201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5089
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3139773"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..874
                     /locus_tag="VLJ38_20745"
     CDS             <1..874
                     /locus_tag="VLJ38_20745"
                     /inference="COORDINATES: protein motif:HMM:NF016693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan 7-halogenase"
                     /protein_id="HSU42026.1"
                     /translation="DCDLARGVEVVVRRADGTEERHTADFLVDASGQSALLPSRLGLR
                     QMEADLRNFAVFSHFEGAERQTGLAEGDISVVLVNEGWWWIIPLRGDRTSVGLVGPAK
                     SLRGEKPDEEFLRARIAATPYVAQRLAQAKRVAPVRTISDWSYRSREMAGDRWLLVGD
                     AGAFIDPVFSTGVQLGLSAAFDAARCIDAALANRRFGRAEFVGYERRMRRLVATYTDF
                     VKGFYTPEFGELLLHPTDKLGLRAAITSLLAGHGKKTLGMGVRVALFHLLAQVHRRVP
                     LMPRRHTSASSLHA"
     gene            944..1711
                     /locus_tag="VLJ38_20750"
     CDS             944..1711
                     /locus_tag="VLJ38_20750"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU42027.1"
                     /translation="MPTALVTGSNRGLGLETARQLVARGYDVIVAARDAESGRHAARE
                     LGPRASFLALDVADPAASERARGSLPSGLALDALVNNAGASFDGFDAEVATRTLATNY
                     YGAVAVTDAFLSRLAPNANIVQVSSGMGELSHASPALRERLLAPGLTRAVLDALLDDF
                     SARVRSGARELGGWPRNAYSVSKIALNAFTRILAPTLTEGRRVNAVCPGWVRTRMGGS
                     SANRSVEQGAQGIVWAATLGPGGPNGGFFRDARPIEW"
     gene            complement(1713..3449)
                     /locus_tag="VLJ38_20755"
     CDS             complement(1713..3449)
                     /locus_tag="VLJ38_20755"
                     /inference="COORDINATES: protein motif:HMM:TIGR02148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibro-slime domain-containing protein"
                     /protein_id="HSU42028.1"
                     /translation="MNAVLVRFRVPGLMSLGFFTLLSSCSSNHAHEDASGGAAGASPL
                     GNGGQASDGSSSAGTAARGSGGAHAAGGSGADAGAGGDTSSGGANDSGGASETGGSTS
                     MGGSTATGGATSTGGHGAESGDAGASDAGTGAACSGCGCANGDCSSVCGDAHVTGAEA
                     CDDGNSLPFDGCSPTCQLEPGCTKGGCTSTCGDGIVAGEDCDDGNTRDGDGCSSACKV
                     EDGYSCTAAACDAVGGSCVLRLPAVFRDFNASGATGGHPDFQPGVNSNGAMQGLVEPE
                     LDSDGKPVLSAAATPSHGFMHGASAFAQWYRDGRPSSGPIAGEIVLWDDGGGGYVNRW
                     GKNGEQWLGYPNDTGYTICQYGCSACGTPAPGQVCLDACTPLTPSATFACILSQQNYD
                     GNPLFFPIDNSPKLLTEPRGEGKVPEQYGWPGFPWESSVASSVGVSSPLQTATAPFPS
                     TTHNFSFTTEVKFWFRYDAGAFQVLDFLGDDDVWVFLNGHLAVDLGGWHVPLNATLTL
                     GVGTLTARVTTTPSSTPTVATLTSTPEAFGLEDGKLYQIAVFHAERQAQGSSFKLALR
                     GLDMSRSTCVKN"
     gene            complement(3567..4634)
                     /gene="leuB"
                     /locus_tag="VLJ38_20760"
     CDS             complement(3567..4634)
                     /gene="leuB"
                     /locus_tag="VLJ38_20760"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HSU42029.1"
                     /translation="MQSKIVLLPGDGVGPEVVDQAKAVLSAVAKQRGHSFDFETRLMG
                     GIAIDETGEALPAETLAACQRADAVLLGAVGGPKWDDPKAKTRPEMGLLGIRRGLGLY
                     ANLRPVRGYTELLGSSPLKPDRVEGVNLLVVRELTGGLYFGAKYREDTPKGVRVVDTL
                     EYHQFEIERIVRLAFEIARGRKKKVTSVDKANVLESSRLWRETATELGAKFSDVTLEH
                     QLVDSCAMRLVTAPGSFDVIVTENMFGDILSDEAAVLTGSLGMLPSASLGEGKLGLYE
                     PIHGSAPDIAGKGIANPLGTILSAALLLRHSLGLEAEAVSIERAVEKALARGARTRDL
                     GGEKTLSTAGMGEAVLAALEN"
     gene            4833..>5089
                     /locus_tag="VLJ38_20765"
     CDS             4833..>5089
                     /locus_tag="VLJ38_20765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42030.1"
                     /translation="MDQILHGQPARVNDIDFAAVKARQQAMWASGDFAVIGTTLQIVG
                     EELCEAMDLRGGLRVLDVAAGNGTTALAAARRWCDVTASDYV"
BASE COUNT          784 a         1750 c         1710 g          845 t
ORIGIN      
        1 cgactgcgac ctcgcgcgtg gcgtcgaggt cgtcgtgcgt cgagcggacg ggacggagga
       61 gcggcacacc gcggacttct tggtggacgc gagcggacag agcgcgctcc tgccctcgcg
      121 cctcggcctg cggcagatgg aagcggatct gcgaaacttc gccgtctttt cccacttcga
      181 aggggccgag cgtcagacgg gactggccga gggcgacatc agcgtcgtgc tcgtcaacga
      241 gggctggtgg tggatcatcc cgctgcgcgg cgatcgcacg agcgtcgggc tcgtggggcc
      301 agccaagtcg ctgcgcggcg aaaaacccga cgaggagttt ttgcgcgcgc gcatcgcggc
      361 gactccctac gtcgcgcaaa ggctcgcgca ggccaagcgt gtggcgcccg ttcgcaccat
      421 ctccgattgg tcctatcgca gccgggaaat ggcgggcgat cgctggctgc tcgtggggga
      481 cgcgggagcg ttcatcgatc cggtgttttc gaccggcgtg cagctcggcc tctcggcggc
      541 gttcgacgcg gcgcgctgca tcgatgccgc gctcgcgaac cgtcgcttcg gtcgtgccga
      601 gttcgtcggc tatgagcggc gcatgcggcg cctggtcgca acgtacaccg acttcgtgaa
      661 aggcttttac acgccggagt tcggcgagct cttgctgcac cccacggaca agctcggcct
      721 gcgcgcggcg atcacgtcgc tcttggccgg tcatggcaaa aagacgctcg ggatgggcgt
      781 gcgcgtggcg ctcttccatc tgcttgccca ggtgcatcgc cgcgtgccgc tcatgccacg
      841 ccgccacact tccgcctcgt ccctgcacgc ctgacgagcg gctcgccacg acagcgtcga
      901 aggcgggctt gcgcctcgcg cgagcgagcc caaagaaaga cgtatgccca cggcgctcgt
      961 caccggcagc aatcgcggcc tcggcctcga aacggcgcgg caactcgtcg cgcgcggcta
     1021 cgacgtgatc gtggcggctc gcgatgcgga aagcggccgg catgccgcgc gcgagctcgg
     1081 cccgcgtgcg agctttctcg cgctggacgt ggccgatccc gctgcgagcg agcgcgctcg
     1141 gggctcgctc ccgtccggcc tggcgctcga cgcgctcgtc aacaacgctg gcgcctcctt
     1201 cgacggcttc gacgccgaag tggcgacccg cacgctcgcg acgaactatt acggcgccgt
     1261 tgcggtcacg gacgcgttcc tgtcgcggct cgcgccgaac gcgaacatcg tgcaagtctc
     1321 gagcggcatg ggggagctca gtcacgcctc gccggcgctg cgtgagcgtc tgctcgcgcc
     1381 gggtctcacg cgtgcggtgc tcgacgcatt gctcgacgac ttcagcgctc gcgtgcgctc
     1441 gggcgcgcgc gagctcggcg gctggccgcg caacgcgtac agcgtctcca aaatcgcact
     1501 gaacgctttc acgcgcatcc tcgcgccgac gcttaccgaa ggccggcgcg tgaacgccgt
     1561 ctgccccggc tgggtgcgga cgcgcatggg cggatcgagc gcgaatcgca gcgtcgagca
     1621 aggcgcccaa ggcatcgtgt gggcggcgac gctcggcccc ggcggcccta acggtggctt
     1681 tttccgcgac gcgcggccga tcgagtggtg actcagttct tcacgcaggt gctacgcgac
     1741 atgtccaggc cgcgcagggc gagcttgaac gacgagcctt gggcctgtcg ttcggcgtgg
     1801 aacaccgcaa tctgatagag cttgccgtcc tcgagtccga acgcctcggg ggtactggtc
     1861 agcgtggcga cggtgggtgt ggagctcggg gtcgtggtga cgcgcgcggt cagcgtgccg
     1921 acgccgagcg tgagcgtcgc gttgagcggc acgtgccaac cacccaggtc gaccgccagg
     1981 tgaccgttca agaacaccca gacgtcgtcg tcgccgagaa agtcgagcac ttggaatgcc
     2041 ccggcgtcat agcggaacca gaacttcact tccgtcgtga agctgaagtt gtgcgtggtc
     2101 gacgggaacg gcgccgtcgc cgtttgcaac ggactcgaca caccgacaga gcttgcaacc
     2161 gacgattccc agggaaagcc tggccacccg tactgttcgg gcaccttgcc ctcgccacgt
     2221 ggttcagtga gaagcttggg actattgtcg atcgggaaaa agagcggatt gccgtcgtag
     2281 ttctgctgac tgaggatgca ggcgaacgtc gcgctcgggg tcagcggtgt gcacgcatcg
     2341 aggcacacct ggcccggcgc aggcgtcccg cacgccgaac aaccgtattg acagatggtg
     2401 tagcccgtat cgttcgggta gccgagccac tgctcgccgt tcttacccca gcggttcacg
     2461 tagccgcccc cgccgtcgtc ccacagcacg atttctcccg cgatgggtcc gctcgatggc
     2521 cggccgtcgc gataccactg cgcgaacgcg ctcgccccgt gcatgaagcc gtgacttggc
     2581 gtcgccgcgg ccgagagcac cggcttgccg tcgctgtcga gctcgggctc gacgaggccc
     2641 tgcatcgcgc cgttgctatt gacgcccggt tggaaatccg gatgaccgcc cgtggcgccc
     2701 gaggcattga aatctcggaa cacggcgggc aagcgcaaca cgcaactgcc gcccaccgcg
     2761 tcgcacgccg ccgcggtgca gctgtagccg tcttccacct tgcaagcgct cgaacagccg
     2821 tcgccgtcgc gcgtgttgcc gtcgtcacaa tcctcgcctg cgacgatgcc gtcgccgcac
     2881 gtgctcgtgc agccgccttt cgtgcaacca ggctcgagct ggcaagtcgg cgagcagccg
     2941 tcgaacggga gcgagttgcc gtcgtcgcac gcttccgcgc ccgtgacgtg cgcatcgccg
     3001 cagaccgacg aacagtcgcc gttcgcgcag ccgcagccgg agcacgcggc acctgtcccc
     3061 gcgtcgctcg cgccggcgtc accactctcc gcgccgtggc cgcccgtcga ggtcgcgccg
     3121 cccgtagcag tcgagccgcc catcgaagtc gagccgcccg tttcgctggc gccgccgctg
     3181 tcgttcgccc cgccgctcga cgtatcgccg cctgcacccg catcggcgcc ggacccgccg
     3241 gccgcgtgag ctccgcccga gccgcgcgca gctgttccgg cgctcgacga accgtcgctc
     3301 gcttgtccgc cgtttccgag tggcgacgcc ccagcagcgc cgccgctagc atcctcgtgc
     3361 gcgtggttgc tcgaacagct cgaaagcagc gtgaagaagc cgaggctcat gagcccaggc
     3421 acccgaaagc gcaccagcac cgcgttcatc gttactccga cagaaggaag acacccacca
     3481 acgccgcatt atacacgcgc ccaagcgcga cgatgcgcgg ggacgggtgt gggtgcagta
     3541 ccgacccgga gttcgccgag aatcgctcag ttttcgagcg ccgcgagcac ggcttcaccc
     3601 atgcccgcgg tcgagagcgt cttttcgccg ccgagatcgc gcgtgcgcgc gccgcgagcg
     3661 agtgcttttt cgaccgcgcg ctcgatgctg acggcttccg cttcgagccc gaggctgtgc
     3721 cgcaagagca gcgctgcgct caagatcgtg ccgagcgggt tcgcgatacc tttgcccgcg
     3781 atgtccggcg ccgaaccgtg aatcggctcg tacaggccga gcttgccctc gccgagcgaa
     3841 gcgctcggga gcatgccgag cgagcccgtc aggacggctg cttcgtcgga gaggatgtcg
     3901 ccgaacatgt tctcggtgac gatgacgtcg aagctgcccg gcgccgtcac gaggcgcatg
     3961 gcgcacgaat cgacgagctg gtgctcgagc gtcacgtcgg aaaacttggc gccgagctcg
     4021 gtcgcggttt cgcgccagag ccgtgacgac tcgagcacgt tcgccttatc gaccgaagtg
     4081 accttcttct tccggccacg agcgatttcg aacgcgagcc gcacgatgcg ctcgatttcg
     4141 aactggtgat actcgagggt atccacgacg cgcacgccct tgggcgtgtc ttcgcgatac
     4201 ttcgcgccga agtagagccc gcccgtgagc tcgcgcacga cgagcaggtt cacgccctcg
     4261 acgcggtccg gcttgagcgg cgacgagccg agtagctccg tgtagccgcg cacgggacgc
     4321 aggttcgcgt agaggccgag tccgcgccgg atgccgagca agcccatctc agggcgcgtc
     4381 ttcgctttcg ggtcgtccca tttggggccg ccgaccgcgc cgagcagcac ggcgtcggcg
     4441 cgctgacacg cggcgagcgt ctcggccggc agcgcctcgc ccgtctcgtc gatggcgatc
     4501 ccgcccatca agcgcgtttc gaaatcgaag ctgtggccgc gctgcttggc gactgccgag
     4561 agcaccgcct tcgcctggtc aaccacctcc ggtcccacgc cgtcgcccgg caggagcacg
     4621 attttcgatt gcatgagccg ccgtctagca tggagacccg ggcgcttgcg agggccgccg
     4681 aaatcacgct gcccgcgagt attttttgag tctcgaggcc cgccggtcga tcggtcatgc
     4741 gggcaggacg aacggtcatt ctcggtcgtg atgccgctcc ctagacactg ctttcggcgc
     4801 acttttccgc gccgaacagg gaaggagtct cgatggatca gattctgcac ggacagccgg
     4861 ctcgagtgaa cgacatcgac tttgcggccg tgaaggcccg ccagcaggcc atgtgggcct
     4921 ccggtgactt tgccgtaatt ggtaccacgt tgcagatcgt cggtgaagaa ctgtgtgaag
     4981 ccatggactt acgcggcggg ttgcgagtgc tggacgtggc ggcgggcaat ggcaccaccg
     5041 ccttggccgc ggcgcggcgc tggtgcgatg tgacggcatc cgattatgt
//
LOCUS       DATIML010001202         1524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1989646, whole genome shotgun sequence.
ACCESSION   DATIML010001202 DATIML010000000
VERSION     DATIML010001202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1989646"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..1421
                     /locus_tag="VLJ38_20770"
     CDS             126..1421
                     /locus_tag="VLJ38_20770"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSU42031.1"
                     /translation="MAETERARLLERPRPRELPIAPAAPSARRRLPLHAETRAVDRQF
                     RPIYAVWELTLRCDLACRHCGSRAGRARHDELTTAECLDLVAQMAELGVLEVTLIGGE
                     AYLRDDFEAIVRALAARRMLVSMTSGGRGITPELAARCKDAGMQQVSISIDGLRETHD
                     RLRGVEGAFDSALAALGHLRAAGLSISCNSQINRLSAPDLPPLLEVLAELGVKAWQLA
                     LTVPMGRAADEPDVLLQPYDLLEVFPMLGALAARADELGVRLWPGNNVGYFGPYEGVL
                     RGTAPRRQSGSCSAGKLVLGIEADGAIKGCPSLPTEAWTGGNVRDASLKDIWERAEPL
                     RYTRDRTVDDLWGYCRTCYYADECRAGCTWTSFVFFGRAGNNPYCHHRALELQRAGKR
                     ERLERTRPAPGAPFDHGSFEIIEEPCATTSSPSTQENRS"
BASE COUNT          229 a          514 c          516 g          265 t
ORIGIN      
        1 gttggctctt cgggccaacg ccgttaggaa ccgagcaaag ccggcagtcg cgcggtccat
       61 ctcggggacg tgcgactcgg ccaccagtgc tagaatgcac gtccatggtg ggctcgcggt
      121 tttccttggc tgagactgag cgggcgaggt tgctcgagcg cccgcgtcca cgcgagctac
      181 cgatcgcacc cgcggcgccg agcgcgcgcc gccgcctgcc tctgcacgcg gagacgcgcg
      241 cggtcgaccg ccagtttcgc cccatttatg ccgtgtggga gctcacgcta cgttgcgact
      301 tggcctgccg tcactgcggc tcgcgtgccg gccgcgcgcg ccacgacgag ctcacgaccg
      361 ccgagtgcct cgatctcgtg gcgcaaatgg ccgagctcgg cgtgctcgaa gtgacgctga
      421 tcggcggcga agcgtacctg cgcgacgact tcgaggcgat cgtgcgggcg ctcgcagcac
      481 gcaggatgct ggtgagcatg acgagtggcg ggcgcggcat cacaccggag ctcgccgcgc
      541 gctgcaaaga cgccggcatg cagcaggtca gcatttcgat cgacggcttg cgcgagacgc
      601 acgatcgact gcgcggcgtc gagggtgcgt tcgacagcgc gctcgcagcg ctcggtcatc
      661 tccgcgccgc cgggctctcg atttcctgca attcgcagat caatcgtttg agtgcgccgg
      721 atttgccgcc gctgctcgag gtcctcgcgg agctcggcgt gaaggcctgg cagctcgcgt
      781 tgacggtgcc gatgggacgc gcagcggacg agccggacgt cttgctccag ccttacgatt
      841 tgctcgaagt ttttccgatg ctcggcgccc tcgccgcgcg cgccgacgag ctcggggtgc
      901 gcctctggcc gggcaacaac gtcggctact tcggcccgta cgaaggcgtc ttgcgcggga
      961 cggcgccgcg ccggcagtcg ggctcgtgct ccgcgggcaa gctcgtgctc ggcatcgaag
     1021 cggacggcgc gatcaagggc tgtccctcgt tgccgacgga agcatggacc ggtggcaacg
     1081 tgcgcgacgc ttcactgaag gacatttggg agcgcgcgga gccgctgcgc tacacacgcg
     1141 atcgcactgt ggacgatctc tggggttatt gccgtacgtg ctattacgcg gacgagtgcc
     1201 gcgccggctg cacgtggacc tcattcgtgt tcttcggccg cgctgggaac aatccttatt
     1261 gccatcatcg cgcgctcgag ctgcagcgag ccggcaaacg cgaacgcctc gagcgcacgc
     1321 ggcccgcgcc gggcgctcct ttcgaccacg gctcgttcga gatcatcgaa gagccgtgcg
     1381 ccacgaccag ctcgccctcg actcaggaga atcgctcgtg acttatctcg ttcaatgcac
     1441 ccattgcctg cgtcacgtcc gttccgacga aaacgagtgc ccgttctgcg ggacgagcat
     1501 cgcagtcgga gctgccttgg accc
//
LOCUS       DATIML010001203         3191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_831670, whole genome shotgun sequence.
ACCESSION   DATIML010001203 DATIML010000000
VERSION     DATIML010001203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3191
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831670"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            396..1391
                     /locus_tag="VLJ38_20775"
     CDS             396..1391
                     /locus_tag="VLJ38_20775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU42032.1"
                     /translation="MGRRKQRDEKIIHVVFGPGGGRMQHRDAGAARGTTPPAEGSREP
                     LTDLFSVSEIARLLDITAARLRTLDRSGVVSPTARRRGRRAYTFSDLIALRTAQSLLQ
                     QRVRLRDVTRAVAALRRSLPKVTRPLQELRIVSDGERVVVRSQDGAFEPLTGQMLLDF
                     EVKTLRDDVVRVLRPSAGRERARTAYELYLRASQLDEEPLTMDEAERLYREAISLDPW
                     LAIAYTNLGNIRFRRQDTVHAEELYKKALEIDARQPEAQYNLGYVMLERGEPDGSIPL
                     FLGAIESDPKFSDAYFNLAMAYEQIGESQKARPYWKSYIMLEPSGTWTEIAKRHL"
     gene            complement(1425..2294)
                     /locus_tag="VLJ38_20780"
     CDS             complement(1425..2294)
                     /locus_tag="VLJ38_20780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HSU42033.1"
                     /translation="MPTNPGTEAQNDGRRTLVAAVQLSSQADVARNLGACERLVAEAA
                     ARGARIVVLPENFAFFGEETARLAAAERLGDTRAPIQSALAAFARASGVYVVGGGMPE
                     RSDDPERPFNTLVCFSPGGELIASYRKIHLFDVELADGTSLCESAKTSAGTEAVVALL
                     DGFRVGLSICYDVRFPELYRRLADQGAELLLVPAAFTLHTGKDHWHVLLRARAIEAQA
                     YVAAAAQWGKHPLGRSTYGHALVADPWGTVTAEASDGVGFALATVSAEKLGAVRRSLP
                     ALGHRHLDRAPSR"
     gene            2354..>3191
                     /locus_tag="VLJ38_20785"
     CDS             2354..>3191
                     /locus_tag="VLJ38_20785"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HSU42034.1"
                     /translation="MTEKRTDEMQTFDAGRRDRPRGRAGLVLLYASEYAALPPAWPLG
                     RDVTVIGRDAAADVVLAVSAVSRRHVEIRRDGDDYVARDLGSRNGTLVNGHPVSEAVL
                     EPLDELRIGDAVLKVVDEGADEYARYRIDGTMVDGARRVPASDALVGGLQMDRILAEL
                     WRVARAPLNVLLLGASGTGKEVVASELHRLSGRAGRFAAVNCAAIPGNLLESELFGFK
                     RGAFSGADRDKPGLIRAADGGTLLLDEIGDMPHEAQAKLLRVLQAREVLPLGATTPEQ
                     VDV"
BASE COUNT          507 a         1091 c         1133 g          460 t
ORIGIN      
        1 tcgttcaaac gcgcgcatcg gtcgcgtgcg tgccgagctc tgcgtgcgcg ccgacgcaca
       61 tggcgtgcgc gtcgacgtcg acgtcgaggc acgcgtgttc gcggagctcg cgcccaagcc
      121 gccgcgacga gccgagccga acgaaccgaa gcgcggagcg cgcggagctt gagccgcgcg
      181 aggccgcgag gggtacgtga cgagcgagca cgcgtgctcg ctcgagcgcg tgagcgccgc
      241 gcgctccgtc aagagcgaac ttcacccgtg cgctgcgaac cccacgtaac gacgacagac
      301 cgcgcgcgct ctagacttgc gccaccggct caccgttcag tgaaggctcc tcttgacagg
      361 ggaccggcgt gagcagagtg atgacgtctc gggccatggg tcgcaggaag cagcgcgacg
      421 agaagatcat ccacgtcgtg ttcggccctg gcggcggacg catgcagcac cgtgacgccg
      481 gggccgcgcg cggcacgacg ccacccgccg aaggcagtcg tgagccgctc accgatctgt
      541 tctcggtgag cgagatcgcg cgcctgctcg acatcacggc cgcgcgcctg cgcacgctcg
      601 atcgctccgg tgtggtttcg ccgacggcgc ggcgccgcgg ccgccgcgcg tacaccttct
      661 cggatctgat cgcgctcagg accgcgcagt cgctgctgca acagcgcgtg cgcctgcgcg
      721 acgtgacgcg cgccgtggcc gctttgcggc gctccttgcc caaggtgacg cgcccgctgc
      781 aggagctccg catcgtttcc gacggcgagc gcgtcgtcgt gcgcagccag gacggcgcgt
      841 tcgaaccgct cacggggcag atgctcctcg acttcgaggt gaagaccctg cgcgacgacg
      901 tcgtgcgcgt gctcagaccg tcggcgggac gcgagcgagc gcgcacggcg tacgagctct
      961 acctgcgcgc gagccaactc gacgaggaac cgctcacgat ggatgaagcc gagcggctct
     1021 accgcgaggc catttcgctc gatccctggc tcgccatcgc ctacacgaat ctcggcaaca
     1081 ttcgcttccg ccgccaggac accgtgcacg cggaggagct ctacaaaaag gcgctcgaga
     1141 tcgacgcgcg ccagcccgag gcccaataca acttgggcta cgtcatgctg gaacgcggag
     1201 agccggacgg cagcatcccg ctattcctcg gcgccatcga gagcgacccc aagttttcgg
     1261 acgcctattt caacctcgcg atggcctacg agcagatcgg cgagtcgcag aaggcacgcc
     1321 cgtattggaa gagctacatc atgctcgagc cttcgggcac ctggaccgag atcgccaagc
     1381 ggcatttgta gcggcgaccg gttcggccgc gcgatcggct aaaatcagcg ggagggcgcg
     1441 cgatcgaggt gccggtgccc gagggccggg agcgagcgtc gtacggcgcc gagcttttcg
     1501 gcagagaccg tcgcgagggc gaaaccgaca ccgtccgatg cctccgcggt caccgtgccc
     1561 cagggatcgg cgacgagggc atgaccgtac gtgctgcgtc cgagcgggtg cttgccccac
     1621 tgcgcggccg ccgcgacgta cgcctgcgct tcgatcgctc gcgcgcggag cagcacgtgc
     1681 caatgatcct tgccggtgtg cagcgtgaac gcggccggca cgagcaggag ctccgcgccc
     1741 tggtccgcga gccttcggta gagctcgggg aagcggacgt cgtagcaaat cgagagcccg
     1801 acgcgaaaac cgtcgagtag ggcgacgacc gcctccgtgc cagcgctcgt cttcgccgat
     1861 tcgcagagcg aggttccgtc agcgagctcg acgtcgaaca ggtggatctt gcggtagctc
     1921 gcgatgagct cgccgccggg tgagaaacac acgagcgtgt tgaacggtcg ctcggggtcg
     1981 tcgctccgct cgggcatgcc gccaccgacg acatagacgc ccgaggcgcg cgcgaaagcc
     2041 gcgagcgcgc tctggatcgg cgcgcgcgtg tcgccgaggc gctcggccgc ggcgaggcgc
     2101 gccgtttcct cgccgaagaa cgcgaaattc tcgggcaaaa cgacgatgcg cgcgccgcgt
     2161 gccgcggctt ccgcgaccag gcgctcgcag gcgccgaggt tccgagccac gtccgcttgg
     2221 ctcgagagct gcacggccgc gacgagcgtg cggcgcccgt cgttctgcgc ttccgttccg
     2281 ggattcgtgg gcaacggggc cgatgctagc accgggcggt gcgcgggcgc taaagtgcga
     2341 gtcagagcga accgtgaccg agaagcgcac cgacgagatg cagacgttcg acgccgggcg
     2401 gcgcgatcgg ccgcgcgggc gcgccgggct cgtcctgctc tacgcgagtg aatacgcggc
     2461 cttgccgccc gcttggccgc tcggacgcga cgtgacggtc atcggtcgcg acgccgcggc
     2521 cgacgtcgtg ctcgcggtga gcgccgtctc gcgacgccac gtcgagattc ggcgcgacgg
     2581 cgacgactac gtggcgcgcg acctcggtag ccgcaacggc acgctcgtga acggacaccc
     2641 cgtgagcgaa gccgtgctcg agccgctcga cgagctccgc atcggcgacg ccgtgctcaa
     2701 agtcgtcgac gagggtgccg atgagtacgc gcgttaccgc atcgacggca cgatggtgga
     2761 tggcgcgcgg cgagtaccgg cctcggacgc gctcgtcggt ggattgcaga tggatcgcat
     2821 cttggccgag ctttggcggg tggcgcgcgc gccgctcaac gtgctcttgc tcggcgcgag
     2881 cggtacgggc aaagaggtcg tcgcctccga gctgcatcgt ctgagcggcc gggcggggcg
     2941 cttcgcggcc gtcaattgtg cggccattcc cggcaacttg ctcgagagcg agctcttcgg
     3001 tttcaagcgc ggcgcgtttt ccggcgccga tcgcgacaaa ccgggcctga ttcgcgcagc
     3061 cgacggcggc acgctcttgc tcgacgagat cggcgacatg ccgcatgaag cgcaggcgaa
     3121 gctcctgcgt gtgctgcagg cgcgcgaggt gctgccgctc ggcgcgacga cgcccgagca
     3181 ggtggacgtc c
//
LOCUS       DATIML010001204         2048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3717888, whole genome shotgun sequence.
ACCESSION   DATIML010001204 DATIML010000000
VERSION     DATIML010001204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3717888"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..1405)
                     /locus_tag="VLJ38_20790"
     CDS             complement(116..1405)
                     /locus_tag="VLJ38_20790"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU42035.1"
                     /translation="MLGLTRYQWLVLFAAWLGWGFDVFDGLLFNFVAPICVPNLLHLR
                     PGDPATQKIIFLWTASLTSLLLIGWALGGILFGRITDRLGRSRTLLLTMLTYALATAA
                     CAFAPNIWVLGVFRFIASLGIGGEWAAGAALVSESLPREKRVVGGALLYSSASFGLFL
                     ATLVNDTLTHRLTAIASDPNLSWRAVFLTGLVPAVVAVVIRLKVKEPDHWKPAETPRV
                     AELFAPNLRRRTLGGLAMSLVALITWWSSSVFIPVVAANLAARQNLHPAALAAATRAH
                     YVSLGSNAFNLGGLVGTLLTIPIASLGRRTLYRIYYLASVVALLVTFVPDWPPPTRLA
                     LLATLGLTVFGVFGSFTFYMPELFPMRLRGTGGGFTYNFGRLITAPFPFAVGALVRGG
                     VDPLVVMSYLAIVPAIGALLAFAGAPVETLGEAEFTE"
     gene            complement(1449..>2048)
                     /locus_tag="VLJ38_20795"
     CDS             complement(1449..>2048)
                     /locus_tag="VLJ38_20795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42036.1"
                     /translation="PGRGASPSGTPAAGPASGGVPQTIPSGNAMSAEGRALQLANQLV
                     QARHDLTSAQADLRNARSERDSLRSELARARARIEELEGSAGGAGVAAKSEESAAPTV
                     DATLERELRARIQELEAELAAARATHVTPPLTDLKLVKGIGPKIEKLLKAHGVTEVPQ
                     IAAWSDADIELIAKKIGVQASRIKKDDWVGGAKRLAGAS"
BASE COUNT          361 a          679 c          728 g          280 t
ORIGIN      
        1 gccaacgcca gccttcttct gagcgaattg gtcgcagggc ggccgcatga accgagcgcc
       61 cgctaaaacc caaaactccg aaagaaatgc ctatttctga cagtagtact aagcgctact
      121 cggtgaactc cgcctcgccc agcgtctcca cgggcgcgcc cgcgaaggcg agcagggcac
      181 cgatcgccgg cacgatggcg aggtagctca tcacgacgag cggatcgaca ccgccgcgca
      241 cgagcgcgcc cacggcgaag gggaacggcg cggtgatcaa gcgcccgaaa ttgtaagtga
      301 agccgccgcc cgtgccgcgg agccgcatcg ggaagagctc gggcatgtag aacgtgaagg
      361 agccgaagac gccgaacacg gtgagaccga gcgtcgccag caacgcgagg cgcgtcggcg
      421 gcggccagtc gggcacgaag gtcacgagca gcgcgacgac gctcgcgagg tagtagatgc
      481 ggtagagcgt gcggcggccg agcgaggcga tggggatcgt gagcagcgtg ccgacgaggc
      541 cgccgaggtt gaaggcgtta ctgccgagcg agacgtagtg ggcgcgcgtg gcggcagcga
      601 gggcggccgg gtgcaggttc tggcgcgctg cgaggttcgc cgcgacgacc gggatgaaga
      661 cactcgagct ccaccaggtg atgagcgcga cgagcgacat cgcgagtccc ccgagcgtcc
      721 ggcgccgcaa attcggcgcg aagagctccg cgacacgcgg cgtctcggcg ggtttccagt
      781 ggtccggctc cttcaccttg agccgaatca cgaccgcgac gacggcaggc acgaggcccg
      841 tcaggaacac ggcgcgccac gataaattcg ggtccgaggc aatcgccgtg aggcggtggg
      901 tcagcgtgtc attgacgagc gtcgccaaga acaagccgaa cgaggccgag ctgtagagca
      961 gcgcgccgcc gacgacacgc ttttcgcgcg gcaggctctc ggacacgagc gccgcgcccg
     1021 cggcccattc gccgccgatg ccgaggctcg cgatgaagcg gaacacgccg agcacccaaa
     1081 tgttcggtgc gaacgcgcag gccgccgtcg cgagcgcata ggtgagcatg gtgaggagca
     1141 gcgtgcgcga gcggcccagc cgatcggtga tgcgcccgaa caagatgccg ccgagcgccc
     1201 agccaatgag cagcaggctc gtgagcgacg ccgtccagag gaagatgatt ttctgcgtcg
     1261 ccggatcgcc cgggcgcagg tggagcaggt tcggcacgca gatgggcgcg acgaagttga
     1321 agagcaggcc gtcgaacacg tcgaagcccc agccgagcca ggccgcaaac aagacgagcc
     1381 attggtaacg cgtgagtccg agcatgtggc tccgtccgcc ggtgttcgtg tgagctgcga
     1441 gctgagcgtc agctcgcgcc cgcgagccgc ttggccccgc cgacccaatc gtcctttttg
     1501 atgcgcgaag cttgcacgcc gatcttcttg gcgatgagct cgatgtcggc gtcgctccag
     1561 gcggcgatct gcggcacctc ggtcacgccg tgcgctttga gcagcttctc gattttgggg
     1621 ccgatgccct tcacgagctt caaatccgtg agcggcggcg tgacgtgcgt ggcgcgcgcg
     1681 gcggcaagct cggcttcgag ctcctgaatg cgcgcgcgca gctcgcgctc gagcgtggcg
     1741 tcgacggtcg gcgccgccga ctcttcgctc ttcgccgcga cgcccgcccc gccggcgctc
     1801 ccttcgagct cctcgatgcg cgcgcgggcg cgggcgagct ccgaacgcaa gctgtcgcgc
     1861 tcactgcggg cgttgcgcaa atccgcttgc gcgctcgtga gatcgtgacg cgcctgcacg
     1921 agctggttgg cgagctgcag cgcccggcct tcggcgctca tggcgttgcc cgaaggaatc
     1981 gtctgcggca cgccccccga ggcaggcccc gcagcaggcg tccccgacgg actcgctccg
     2041 cgccccgg
//
LOCUS       DATIML010001205         2768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1699644, whole genome shotgun sequence.
ACCESSION   DATIML010001205 DATIML010000000
VERSION     DATIML010001205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1699644"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..1268
                     /locus_tag="VLJ38_20800"
     CDS             207..1268
                     /locus_tag="VLJ38_20800"
                     /inference="COORDINATES: protein motif:HMM:NF008022.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HSU42037.1"
                     /translation="MKRSRFLALLIGGSVSLLACSKAGNEPTSTTAGSASAAPVPAPT
                     AVELLNVSYDPTRELWRDINGKFTAAYAKETGVTVTIKQSHGGSSTQARAVIDGLDAD
                     VVTLASFLDTDAISKKGLIKPGWIDEFPNRSLPYTSTIVFVVRKGNPKGVKDWPDLLK
                     AGVEVVTPNPKTSGNGYMSFFGAWGSVMLRGGSREAAVKYVTDLYKHVPVLDSGARGA
                     TTTFVQKKIGDVHLAWENEAQLEVREAKGELDLVYPPISILAEPHVAIVDANVDRKGT
                     RKAAEAYLKYLYTDEAQEIIAQHFYRPFNAAVQKRHSDLFPEIKRFPVTDIAKDFPDA
                     HKQFIAEGGVFDSIYKPKP"
     gene            1284..2108
                     /gene="cysT"
                     /locus_tag="VLJ38_20805"
     CDS             1284..2108
                     /gene="cysT"
                     /locus_tag="VLJ38_20805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HSU42038.1"
                     /translation="MARNNSRILPGFSLTLGYTMFYLSVLVLVPIAACFVRAGQLSAH
                     EFWRAVWTERARAAYLLTFGSSLVAALVNVVLGALIAWVLVRYSFPGKRLIDSLVDLP
                     LALPTAVGGLVYASLYVKSGWLGRYLVPLGIQGAYTRLGIVLVLVFVGLPFMVRAVQP
                     VLEDLDAEEEEASSSLGASRFQTFRHVILPALYPAIITGFALAFARSVGEYGSVVFIS
                     GNMPFKTEIAPILIVARLEEFAYGEATAIAVVLLLISLGMLILINLLESWTRRHAA"
     gene            2098..>2768
                     /locus_tag="VLJ38_20810"
     CDS             2098..>2768
                     /locus_tag="VLJ38_20810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42039.1"
                     /translation="MQPDTTTGQTKTAAPSTGPVRRAQADPAWVRYGLITLTLLVVGV
                     LVVVPILNVFVGALSEGIGVYFHNLVDDPDTRSAILLTLTVVPIALVANVIFGVAAAW
                     TVTRFSFPGRTLLVAFIDLPFSVSPVVAGLMFVLIFGLQGYFGPFLRRDGYSVMPWLV
                     AGVVVLALGALYLVFRPRAARVARGFWKLSPWLVTVAGGGTLFALLVVAQQALGLWPQ
                     HQSLK"
BASE COUNT          426 a          914 c          881 g          547 t
ORIGIN      
        1 gcggaacctc gcaccgtcgg cggcagctga tcgcagtggc gataacgatc agcaacatcc
       61 tcgtgcggca gcgcgcgcga gcgcctgcaa ctcgttgata tgacatgcaa ttatgccgtt
      121 cgtgccgcac tggacaaata gtctatcaat ccggtagacg aactgtggta tagcttcctt
      181 tcgtacgaac accggagaaa cccacgttga aacgttcacg cttcctcgcg ctcctcatcg
      241 gcggctctgt ttcgctcctc gcttgcagca aggcgggcaa tgagccgacc tcgacgacgg
      301 cgggctccgc gagcgctgct ccggtgcccg cacccaccgc ggtcgagttg ctcaatgtct
      361 cttacgaccc cacgcgcgag ctctggcgcg acatcaacgg gaaattcacg gcggcgtacg
      421 ccaaagagac gggcgtaacc gtcacgatca agcagtcgca cggcggctcg agcacgcaag
      481 cgcgcgccgt gatcgacgga ctcgacgccg acgtcgtgac gctcgcgagc ttcctcgaca
      541 ccgacgcgat ctcgaagaag gggctcatca agccgggctg gatcgacgag tttccgaacc
      601 gctcgctgcc ctacacctcg acgatcgtgt tcgtcgtccg caaagggaac ccgaagggcg
      661 tcaaggattg gccggacctg ctcaaggcgg gcgtcgaggt cgtgaccccg aacccgaaga
      721 cctccggcaa cggctacatg tcgttcttcg gcgcctgggg ctccgtcatg ctgcgcgggg
      781 gctcgcgcga ggcagccgtc aagtacgtga ccgacctcta caagcacgtg cccgtgctcg
      841 attccggcgc gcgcggcgcg accacgacgt tcgtgcagaa gaagatcggc gacgtgcacc
      901 tcgcctggga aaacgaggcg cagctcgagg tccgcgaggc caagggcgag ctcgatctcg
      961 tttacccgcc gatcagcatt ctcgccgaac cccacgtggc catcgtcgac gccaacgtcg
     1021 accgcaaggg cacgcgcaag gctgccgagg cttatctcaa gtacctctac accgacgaag
     1081 cgcaggagat catcgctcag cacttctatc gtccgttcaa cgcagcggtg cagaagcggc
     1141 actccgacct cttcccggag atcaagcgct tcccggtgac ggacatcgcc aaggatttcc
     1201 cggacgcgca caagcagttc attgccgagg gtggggtgtt cgactccatc tacaagccca
     1261 agccgtgagt tttggagggc tcgatggcac gtaacaattc gcgcatcttg cccgggtttt
     1321 cgctgacgct cgggtacacg atgttttacc tgagcgtgct cgtgctcgtg ccgatcgcgg
     1381 cttgcttcgt gcgcgcgggg caattgagcg cgcacgagtt ttggcgcgcc gtctggaccg
     1441 agcgcgcgcg cgcggcgtac ctgttgacgt tcggttcgtc gctcgtcgcg gcgctcgtca
     1501 acgtcgtgct cggcgcgctg atcgcttggg tgctcgtgcg ctactcgttc ccgggtaagc
     1561 ggctgatcga ttcgctcgtc gatttgccgc tggccttacc cacggccgtc ggcggactcg
     1621 tgtatgcgag cctctacgtg aagagcggct ggctcggccg ttacctcgtg ccgctcggca
     1681 ttcagggcgc gtacacgcgg ctcggcatcg tgctcgtgct cgtgttcgtg gggttgccgt
     1741 tcatggtgcg cgccgtgcag ccggtgctcg aagatctcga cgccgaggaa gaggaggcgt
     1801 cgtcgtcgct cggtgcgagc cgctttcaaa cgttccggca cgtgatcttg cccgcgctct
     1861 accccgccat catcacgggc tttgcgctcg ctttcgcgcg ttcggtcggc gaatacggct
     1921 cggtcgtctt catctccggc aacatgccgt tcaagacgga aatcgccccg attctcatcg
     1981 tcgcgcggct cgaggagttc gcctacggcg aggcaacggc gattgccgtc gtgctgctcc
     2041 tgatctctct cggcatgctg atcctgatca acctgctcga aagctggacg cggcgccatg
     2101 cagcctgaca ccactactgg gcagacgaag acggctgcgc cgagcaccgg gcccgtgcgg
     2161 cgcgcgcaag cggatcccgc ctgggttcgc tacggtctca tcacgctcac gttgctcgtg
     2221 gtcggcgtgc tcgtcgtggt gccgatcctc aacgtgttcg tcggcgcgct gtccgagggc
     2281 atcggcgtct acttccacaa tctcgtggat gatccggaca cgcgcagcgc cattttgctg
     2341 acgctcacgg tcgtgccgat cgcgctcgtc gcgaacgtga tcttcggcgt cgcggcggct
     2401 tggacggtga cgcgcttctc gtttccgggt cgcacgctgc tcgtcgcgtt catcgacctg
     2461 ccgttttcgg tctcgcccgt ggtcgcgggg ctcatgttcg tgctgatctt cgggctgcag
     2521 ggctacttcg ggccatttct gcggcgcgac ggctactcgg tcatgccctg gctcgtcgcc
     2581 ggcgtcgtcg tgctcgcgct cggggcgctc tacctcgtgt tccgaccccg cgctgcgaga
     2641 gtggcgcgcg ggttttggaa gctgtcgccg tggctcgtga cggtggccgg cggcggcacg
     2701 ctcttcgcgc tgctggtcgt cgcgcaacag gcgctcgggc tgtggcctca gcaccagagt
     2761 ctgaagat
//
LOCUS       DATIML010001206         2562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3427520, whole genome shotgun sequence.
ACCESSION   DATIML010001206 DATIML010000000
VERSION     DATIML010001206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3427520"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VLJ38_20815"
     CDS             complement(<1..669)
                     /locus_tag="VLJ38_20815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase"
                     /protein_id="HSU42040.1"
                     /translation="MRYLPHTPEEIAEMLGIIGKASIDELFETIPENVRHQGELNVLP
                     ALDEPTLMLHLRELADKNAGSAMLSFLGAGIYDHHLPPAVDQLLLRSEFYTAYTPYQP
                     EVAQGTLQAIFEFQTIVSELYGLPLANASLYDGASATAEAALMATRLTKRGKVIASGC
                     VHPDYRATTHTYLSGRADLTYVEVPEGKDGMADTAALARAIDDATAAVVVGYPSFYGG
                     IQDLR"
     gene            complement(678..1085)
                     /gene="gcvH"
                     /locus_tag="VLJ38_20820"
     CDS             complement(678..1085)
                     /gene="gcvH"
                     /locus_tag="VLJ38_20820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HSU42041.1"
                     /translation="MAGATETKDDRKYTKDHEWALTEGDELLVGITAFAVDQLGDVTL
                     VGIDVKVGASVNAHQPFGTIESVKTLSDLFAPVSGVITRVNAELETQPELVNEDPWKK
                     GWMIAIRPSKLSEEQANLLDAAAYRAHLEASAH"
     gene            complement(1110..2204)
                     /gene="gcvT"
                     /locus_tag="VLJ38_20825"
     CDS             complement(1110..2204)
                     /gene="gcvT"
                     /locus_tag="VLJ38_20825"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HSU42042.1"
                     /translation="MRKTSLYAEHVALGARMVPFAGWEMPVQYKGIVDEHRAVRERVG
                     LFDVSHMGELELTGPGALELVSSLITNDPTRVADGQAVYTCCCNEGGTILDDLIVYRR
                     SPENVLVVCNASNREKIATHFARAAEGRVGFRDASDATALLALQGPRALETLAAAGSS
                     VDVARELKSFRFRDAEVAGVRCTVARTGYTGEDGVELFCGWDDAPALFRALMTAGRAF
                     GIEPVGLGARDTLRLEARLALYGNDIDDSTDPLEAGLGWVVKFDKPHFVGKEALLRLK
                     AEGPRRALVGFEMRGRGIARHGYPLLDATGETIGLCTSGSPSPTLGKNIGLGYVPAAL
                     AAPGNRIFVDCRGKSIEAEIVPTPFYKRSR"
     gene            2315..>2562
                     /locus_tag="VLJ38_20830"
     CDS             2315..>2562
                     /locus_tag="VLJ38_20830"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU42043.1"
                     /translation="MSKGRVLIIEADEWVAVLLKKFLADAGFSVDLATGAKEGFDKVR
                     ALTPDCILCDVNLPDIDGFWVARRVRTEPSAVSTTPFL"
BASE COUNT          383 a          844 c          866 g          469 t
ORIGIN      
        1 gcgcaggtct tggatccctc cgtaaaagct cgggtagccg acgacgaccg ccgccgtggc
       61 gtcgtcgatg gcgcgcgcga gcgcggccgt gtcggccatg ccgtctttgc cttccggcac
      121 ttcgacgtac gtcaggtccg cgcgcccgct caggtacgtg tgcgtcgtcg cgcggtagtc
      181 ggggtgcacg caaccgctcg cgatcacctt gccgcgcttg gtgaggcggg tcgccatcag
      241 cgcggcctcc gccgtcgcgc tcgcgccgtc gtagaggctc gcgtttgcga gcggcaagcc
      301 gtaaagctcg ctcacgatcg tctgaaattc gaagatggcc tgcagcgtgc cctgcgcgac
      361 ctcgggctgg tacggcgtgt aagcggtata aaattcgctg cggaggagca gctggtcgac
      421 cgcgggcggc aggtggtgat cgtagatgcc ggcgccgagg aacgagagca tcgcgctgcc
      481 cgcgtttttg tcggcgagct cgcgcaagtg gagcatgagc gtcggctcgt cgagcgccgg
      541 cagcacgttc agctcaccct gatgccggac gttctccgga atggtctcga agagctcgtc
      601 gatgctcgcc ttgccgatga tgccgagcat ctcggcgatt tcctcgggtg tgtgcgggag
      661 gtagcgcatg ttcgaggtca gtgggcgctc gcttcgaggt gggcgcggta ggccgcggcg
      721 tcgagcaggt tcgcttgctc ttcgctaagc ttgctcggcc gaatcgcgat catccagccc
      781 tttttccaag gatcctcgtt gacgagctcg ggttgcgttt cgagctcggc attgacgcgc
      841 gtgatgacgc cgctcacggg cgcgaacaag tcgctcagcg tcttcacgct ctcgatcgtg
      901 ccgaacggct ggtgcgcgtt cacgctcgcg ccgaccttca cgtcgatgcc cacgagcgtc
      961 acgtctccga gctgatcgac cgcgaacgcc gtgatgccga ccaagagctc gtcaccctcg
     1021 gtgagggccc attcgtgatc cttcgtgtac ttgcggtcgt ctttcgtctc ggtggctccg
     1081 gccatgtctg ctccttgtgg cgtcgcgatc tagcgcgacc gcttgtaaaa tggtgtcggg
     1141 acgatctcgg cttcgatcga tttgccgcga cagtcgacga aaatgcgatt gcctggcgcg
     1201 gccagcgccg cggggacgta gccgagcccg atgttcttgc cgagcgtcgg cgacggcgag
     1261 cccgaggtgc agagcccgat ggtctcgccc gtggcgtcga gtagcgggta accgtgacgc
     1321 gcgatgccgc gtccgcgcat ttcgaaaccc acgagcgcgc ggcgcggtcc ctcggccttg
     1381 aggcgcaaga gcgcttcttt gccgacgaag tgcggcttgt cgaacttcac gacccagccg
     1441 aggccggcct cgagcgggtc ggtgctgtcg tcgatgtcgt tgccatagag cgcgaggcgc
     1501 gcttcgagcc gcagcgtgtc gcgcgcgccg agccccacgg gttcgatacc gaacgcgcgc
     1561 ccggcggtca tcaatgcgcg aaagagcgcc ggcgcgtcgt cccagccgca aaagagctcg
     1621 acgccgtctt cccccgtgta gccggtgcgc gcgaccgtgc agcggacgcc cgcgacctca
     1681 gcgtcccgga agcggaaact cttgagctcg cgcgcgacgt cgacgctcga ccccgccgcg
     1741 gcgagcgtct cgagcgcgcg cggtccctgc aaggcgagca gcgccgtcgc gtcgctcgcg
     1801 tcgcgaaaac caacgcgtcc ctccgccgct cgcgcgaagt gcgtcgcgat cttttcgcga
     1861 ttggacgcat tgcagacgac gagcacgttc tccggcgaac gccggtacac gatcagatcg
     1921 tcgaggatcg tcccgccctc gttgcagcag cacgtgtaga cggcttggcc gtcggcgacg
     1981 cgcgtcggat cgttcgtgat gagcgagctc acgagctcga gcgcgcccgg ccccgtgagc
     2041 tcgagctcgc ccatatgcga cacgtcgaac aagccgacgc gctcgcgcac cgcgcggtgc
     2101 tcgtccacga tgcccttgta ctgcacgggc atctcccagc cggcgaacgg aaccatgcgc
     2161 gcgccgagcg cgacgtgttc cgcgtaaagg gaggtttttc gcatccgagt cgctccgact
     2221 agcatcgaaa gccgccgggc ggaaaggacg gaaatgcgcg tgtctttccg cgcgaatttc
     2281 gggagattcc ggccggcgtg ctagttttgc cccggtgtcc aagggccgcg tgctcatcat
     2341 cgaagccgac gagtgggtcg cggtgttgct caagaagttt ctggcagatg ccggattcag
     2401 cgtggacctc gcgacgggcg ccaaggaggg cttcgacaag gtccgcgccc tgacgcccga
     2461 ctgcatcctc tgcgacgtga atctgccgga catcgacgga ttttgggtcg cgcgccgtgt
     2521 gcggaccgag ccatccgccg tctcgacgac cccgtttttg tt
//
LOCUS       DATIML010001207        10214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4295897, whole genome shotgun sequence.
ACCESSION   DATIML010001207 DATIML010000000
VERSION     DATIML010001207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10214
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4295897"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..534
                     /locus_tag="VLJ38_20835"
     CDS             <1..534
                     /locus_tag="VLJ38_20835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU42044.1"
                     /translation="EVASGNLREDLYFRLDVFPMKCPALRERREDIPLLAEAFVSSFC
                     NENGLKPKRIDPSVHESLCRREFPGNVRELKNAVERAAILASDIITVADLPEDPHLSP
                     FDDDGESDESAPGPRSTPGERPTLREYRENAERGYIIETLKDADWNVSKAAVTLGVER
                     TNLHKKIRAYGIKRGEG"
     gene            803..2278
                     /locus_tag="VLJ38_20840"
     CDS             803..2278
                     /locus_tag="VLJ38_20840"
                     /inference="COORDINATES: protein motif:HMM:NF025627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HSU42045.1"
                     /translation="MSLGAGGTMISMAGTGAGGSGATPTSGGSGGTGPVPNGGMAGSS
                     APMAGRGGSSMGGASGGTPGAPLAGMAGMSAAGSGSVSVGSCTFNVTASVSDKITSVG
                     LVDWSVDRPGLDSASIEFGLDTSYGSSAPVDLKAANYHTLLLGMKYGHSYHFKVIAQA
                     GSERCESADYTLQTGPLPNGLPKPTLTTMAADKVFGGFTISERWGANKMGPSFIFDKD
                     FDYVWMYPGEDDVIRTRMSFDGKAMWLRNTAQTDGTGVVRRVSMDGLKEDRWELPHTT
                     HDLAVIPDGHVGLVGHASSGCDEILDFNPDDGTLTSLFNAKEAHGNTMCHVNYLAYFA
                     GDDSFVFSDYDASSLIKITRHGDFVWGLNGDASTISGTSWVREHGVHILAPDDLIVFS
                     NGDGAAQKSLVFELKLDLAAKTATELWRYDADQNTTFGGDVQKLANGNLLVTYSSSGV
                     IQELDPSRNVVQQATFDIGSALAYTERRLSLYGGPPPKIYE"
     gene            complement(2749..3192)
                     /gene="dut"
                     /locus_tag="VLJ38_20845"
     CDS             complement(2749..3192)
                     /gene="dut"
                     /locus_tag="VLJ38_20845"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HSU42046.1"
                     /translation="MIRVLARRTGPVAVPLPEYQTSGAAGADLHAALSEAVTLAPGER
                     RLIPTGLVLAIPDGYEGQVRPRSGLALKHGIGMVNAPGTIDSDYRGPVGVLLVNLGAE
                     PYVIEPLARIGQLVIAPVTRAQFAFADELGETARGEGGFGSSGYR"
     gene            complement(3189..5819)
                     /locus_tag="VLJ38_20850"
     CDS             complement(3189..5819)
                     /locus_tag="VLJ38_20850"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU42047.1"
                     /translation="MSVEIEPSLATVAPLVRAPVIGRDGELALLKQIYDSVLARGEMR
                     VATVVGPAGIGKTRLAEQLVVELPATRRPRVYRGAARAQGLAYGLFDSLLRSAFDLTE
                     GLSHEASVIRVRDQVASILDDRRVGDVCYFLGGLCGLSFTDSPFTRAVMDDPLQARLI
                     RRAVLRSFFEAEARKTPLCLIFDDLQDADEDSLDLLVYLMQELKGPIFLVCLARPDLL
                     SRHERWLEISGPRHDLIELGPVSSLDARAIIQAFLTPCENGPPDRLLEAGLGMAGGNP
                     GLLAHMVRIFHDCGVLRETGEAGSSPSWTVDLDRLNHARLPTTMEDAVSARLGVLSAV
                     ERRLLEHAAAMGSVFWLGGLVALARMDREAPDLWDPKAENDVVEIERALAELVQRDYV
                     LRLPDSAFPGEIEYVFKHNLERERIAQMISPAASRRRHQTIADWLAQKDNVRSQEEYS
                     AMLARHLELAGCCTRAAFTYIDSGGLARAQYAQKRANDHYRRGLELLGEDDARRRLDA
                     LHDHGDVLVQLGRTDEALAAFREMLALAYRLGLKGKGGAAHNRIGRLYRDTGSLDVSR
                     RQLERGLELFEAVGDRRGVAASHDDIGRLLWMRGEYEPALEQMRTALDMRKELGDGRS
                     IALSLNNIGLVWRDHGQQAKAREALEASLAIRRERNDPLGIVESLNALGDLALDHAEA
                     EKALKLFYEAHAIARDVGEHNRIALVLTNIGEALLRLKRVDEAIKVLTEAEGLCDETG
                     DRLHLAEAKQGLAKAYLEQKDLKRARESIKRAVDLLGQVRSKPHLAVALRTLGEVTGA
                     GAWGGGHEVKAVDYFMRSIAICKEIGNELEVAKSYRAFSSYVFSSPHYRHNADIQREA
                     HKLESMAEEIFERHRLGAAS"
     gene            6042..6890
                     /gene="accD"
                     /locus_tag="VLJ38_20855"
     CDS             6042..6890
                     /gene="accD"
                     /locus_tag="VLJ38_20855"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HSU42048.1"
                     /translation="MALPERTPAQSTNAEKRSVGRGLFRKCAGCGAVSTVEELRVRFL
                     VCGSCGHHHPMPVEEWMRLLLDGGELEVWDEHIAPTDPLGFDDGKSYPERLLRAQRNT
                     GLTEAIRIGRGRIEECPIAIGIFAFGFMGGSMGSVVGERITRLFERAALERLPVVLLH
                     SSGGARMQEGILSLMQMAKTVAALGRFRATRKPYLSVLLHPTTGGVAASTALLGDVNL
                     AEPNALIGFAGPRVIENTLRTTLPEGFQKSDFLVAHGMVDAIVPRLELRASLRTLLGH
                     LAGSAA"
     gene            6887..8116
                     /locus_tag="VLJ38_20860"
     CDS             6887..8116
                     /locus_tag="VLJ38_20860"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="folylpolyglutamate synthase/dihydrofolate
                     synthase family protein"
                     /protein_id="HSU42049.1"
                     /translation="MSDLKRTLERLYALVPRGQKLGLERMQAACERFGHPERAFEAIH
                     VAGTNGKGTVCAFTASMARAGGRRVGMYTSPHLNRFAERIQIDGQPVDDDTLVRLLNQ
                     VMDAAPDLTFFEVATLAAFMAFRDAAVDLAVLEVGLGGRLDATNVIPPPRVAAITRVS
                     FDHMVELGDTLGKIAAEKAGIIKTGGAVVLGKIHPEARAVIEAQIQSVGARLIPLGTP
                     EPIPGAPLAYPRIALVGSNLAVAVTIGRELGITPDLLAQGLEATQWPGRNELLHRNGQ
                     ELTLLDCAHNPDGAVALSHALDPSVLGEIESRREIALVFGTLHTKNWRAMLRRLENVA
                     GHRVYVAPPVAKAVDPREMANFLPGEVASDVGQALDRARALVGPRGVVVVTGSTFLVG
                     PARALLLNLQSDPPVAL"
     gene            8142..9512
                     /gene="glmM"
                     /locus_tag="VLJ38_20865"
     CDS             8142..9512
                     /gene="glmM"
                     /locus_tag="VLJ38_20865"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HSU42050.1"
                     /translation="MTRHLFGTDGIRGRAGIEPMTPELALNLGRAIAYVARRGRSRIP
                     RIVIGKDTRVSGYMLEQALAAGICAMGGRVLLTGPIPTPAVANLTQTMRADAGVVISA
                     SHNPFADNGIKLFGPDGYKLPDEEEAAIEALLVDPKLLSLSKHGSGVGRAERLDDAFG
                     RYVVYAKGTFPRELTLHGLKIVVDAAHGAAYRVAPAVLAELGADVCCIGCRPNGVNIN
                     RLAGALHPNQVAAEVKKRKAHLGVALDGDADRVVFVDEHGELVDGDAVMALCGTRLAR
                     AGRLAKGTVVATVMSNMGLERALAAAGAKLRRTAVGDRYVMEEMRKDGLTFGGEQSGH
                     LIFAEHATTGDGTVAALQVLAIMLREERPLSELARGMERVPQLLESVKLPSRRPLEEM
                     AELTQRIAAAEAELGTSGRVLVRWSGTEPKLRLMLEGPDPAALRTMLTELAEAAQRDT
                     ASRAAS"
     gene            9676..10104
                     /locus_tag="VLJ38_20870"
     CDS             9676..10104
                     /locus_tag="VLJ38_20870"
                     /inference="COORDINATES: protein motif:HMM:NF020965.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyloxyacyl hydrolase"
                     /protein_id="HSU42051.1"
                     /translation="MLIGRQVFETCCFAWRAGITATSATGYIVQFDEHLHDTQLESNA
                     VGIGPTAVLRLQTPELARWVLSFEGSGAFILYSRHFPAGGDVYNFMWRAGPSLSYRFD
                     DTWSAGAGARVMHVSNGQGLTPKNPSYAALGVTLWLAWRL"
BASE COUNT         1684 a         3463 c         3425 g         1642 t
ORIGIN      
        1 gaggtcgcgt ccggcaatct ccgtgaggac ctgtacttcc ggctcgacgt gttcccgatg
       61 aagtgccccg cgctccgcga gcggcgcgag gacattccgc tcctcgctga agcgttcgtg
      121 agctcctttt gcaacgagaa cgggctcaaa cccaagcgca tcgacccttc ggtgcacgag
      181 tcgctctgcc ggcgggaatt tcccggcaac gtgcgcgagc tcaagaacgc cgtggaacgc
      241 gcggccattc tcgcgagcga catcatcacc gtcgccgact tgcccgagga tccgcacctg
      301 tcgccgttcg atgacgacgg ggagtcggac gaatccgcac cggggccgcg ttcgacgccc
      361 ggcgagcgcc ccacgctacg cgagtaccgc gagaacgccg aacgcggtta catcatcgag
      421 accctgaagg acgccgactg gaacgtgtcg aaagccgccg tgacgctcgg tgtcgagcgc
      481 acgaacctgc acaagaagat ccgcgcgtac ggcatcaagc gcggcgaggg ataagcctag
      541 cggcgcagtc gactgagcgg cgcggtaccc gtgacaaatt cgtcgccccg ctcacggcgc
      601 agattgaggg cttcgcggtt cggtgcctcg cgatctcgag cgcgaacact aacgtcgggt
      661 gaagcgaagc ttatttgagg tcacacggtg gcggcgaggg cgcgaactgg ggctcgcagc
      721 ggtgggcgtt tgcgtgtggg cgtgctcgtc accgtctgcg gcgccacacg ggccgaatgc
      781 ggcgggcgcc gccggagtcg ctatgtcgct cggcgcgggc ggcacgatga tttcgatggc
      841 gggcactgga gcgggcggca gcggagccac acctacttcg ggcgggagcg gcgggacggg
      901 ccccgtgccg aacggcggca tggctggaag ctcggccccc atggcgggca ggggtggctc
      961 gagcatggga ggggccagcg gcggaactcc aggcgctccc ctcgccggca tggcgggaat
     1021 gagcgccgcg ggcagcggct cggtctcggt gggtagttgc accttcaacg tcaccgcgtc
     1081 cgtgagcgac aagatcacga gcgtcggcct ggtagattgg agcgtcgatc gccccgggct
     1141 cgacagcgcc tcgatcgagt tcggcctcga cacgagctac ggctcgagcg cgccggtcga
     1201 tctgaaggcg gcgaactacc acacgctgct cttgggtatg aaatacgggc acagctacca
     1261 cttcaaagtc attgcccagg ccggcagcga gcgctgcgag agcgccgact acacgctgca
     1321 aacgggaccg ctcccgaacg gactgccgaa gccgaccctg acgaccatgg cggcggacaa
     1381 ggtcttcggc gggttcacga tcagcgagcg ctggggtgcg aacaagatgg ggccgtcgtt
     1441 catcttcgac aaggatttcg actacgtctg gatgtatccc ggcgaggacg acgtgatccg
     1501 cacgcgcatg tccttcgatg gcaaggcgat gtggctgcgc aacacggcgc agaccgacgg
     1561 cacgggcgtc gtccggcgcg tcagcatgga tggcctcaaa gaggatcgct gggagctccc
     1621 gcacaccacg cacgatctcg cggtgattcc cgacggccac gtgggcctcg tcggacacgc
     1681 ctcgagcggc tgcgacgaaa tcttggattt caaccccgac gacggcaccc tcacctcgct
     1741 cttcaacgcg aaagaagcgc acggcaacac gatgtgtcac gtgaactacc tcgcgtactt
     1801 cgccggcgac gacagcttcg tcttctccga ctatgacgcc tcgagcctga tcaagatcac
     1861 gcgccacggc gatttcgtgt ggggcctcaa cggcgacgcg agcacgatca gcggcacgag
     1921 ctgggtccgc gagcacggcg tgcacatcct tgcgcccgac gacctcatcg tcttcagcaa
     1981 cggcgacggc gccgcgcaaa aatccctcgt gttcgagctc aagctcgatc tcgccgccaa
     2041 gaccgcaacc gagctctggc gttacgacgc ggaccagaac acgaccttcg gaggcgacgt
     2101 gcagaagctc gcgaacggca acctgctcgt cacctactcg tcgtcgggcg tcattcagga
     2161 gctcgatccg tcgcgcaacg tggtccagca agcgacgttc gatatcggca gcgcgctcgc
     2221 gtacacggag cggcggctct ccttgtacgg cggcccgcca cccaagattt acgagtagtt
     2281 acgggccaga agcggccgag ggacgaaaaa atcgggggcg gcgcgcaact acgcgcgaga
     2341 ccgcgccgac cgagacgcat gattcatcga actcgaatgg tcgcagcttt gctctgtgtc
     2401 acttccgtcg cactcgcttg ttcgagcggc accgggtcga ccgataccgc ggacggatcc
     2461 agcgtcgaga acgggacgcc cgctctgccc gcggactgca gcggctccta ccagtgcggt
     2521 tacacggata ctgacgggca ataccaagcg gtctcaggcg gctggttggt ccaggaggat
     2581 cgacggtgcg tgttccagtt ctcgggagca agcacgaacg acgtcgatct atcggatccg
     2641 aaggtcgaga ttgagggccg acggttctcc atcgctcggt cgaatgggag cctcacgttc
     2701 gtggtccact gctggcccgc tgatagctga cggctgccga tcgcgctttc aacggtaccc
     2761 gctcgacccg aacccgccct caccccgggc cgtctcgccc agctcgtccg caaacgcgaa
     2821 ctgtgcgcgc gtgaccggcg cgatcacgag ctgcccgatg cgcgcgagcg gctcgatcac
     2881 gtacggctcg gcgccgagat tcacgagcaa aacgccgacc gggccgcgat agtcgctgtc
     2941 gatcgtgccg ggggcgttca ccatgccgat gccgtgcttc agcgcgaggc ccgagcgcgg
     3001 acgcacctgg ccttcgtagc cgtcggggat ggcgagcacg aggcccgtcg ggatcagccg
     3061 gcgttcgccg ggggcgagtg tcaccgcttc ggacagcgcg gcgtggagat cggcgccggc
     3121 cgcgccgctc gtttggtatt cggggagcgg cacggcgacc gggcccgtgc ggcgcgcgag
     3181 cacgcgaatc acgaggccgc tcccaggcgg tgacgttcga agatttcttc ggccatggac
     3241 tcgagtttgt gggcttcgcg ctggatgtcg gcgttgtgcc ggtaatgcgg cgaggagaac
     3301 acgtagctcg aaaacgcgcg gtagctcttc gcgacctcga gctcgttgcc gatttccttg
     3361 cagatcgcga tcgagcgcat gaagtaatcc acggctttga cctcgtgtcc gccgccccag
     3421 gcgcccgcgc ccgtgacctc gccgagcgtc ctgagcgcga ccgcgaggtg cggcttgctc
     3481 cgcacctgcc ccagcaaatc gaccgcgcgt ttgatcgact cgcgcgcgcg cttgagatcc
     3541 ttctgctcga ggtacgcctt ggcgagcccc tgcttggctt cggcgaggtg tagccggtca
     3601 cccgtctcgt cgcacaagcc ttcggcttcg gtcagcacct tgatcgcttc gtccacgcgt
     3661 ttgagccgga gcagcgcctc gccgatgttc gtgaggacga gcgcgatgcg gttgtgctcg
     3721 cccacgtcgc gcgcgatcgc gtgcgcttca tagaagagtt tgagggcttt ttctgcctcc
     3781 gcgtgatcca aggcgaggtc gccgagggcg ttcaggctct cgacgatgcc gagcgggtcg
     3841 ttgcgctcgc gccggatggc gaggcttgcc tcgagcgctt cgcgcgcttt ggcttgttgg
     3901 ccgtgatcgc gccagaccag gccgatgttg ttcaagctga gcgcgatgga gcgaccgtcg
     3961 ccgagctctt tgcgcatgtc gagcgccgtg cgcatctgtt cgagcgccgg ctcgtactcg
     4021 ccgcgcatcc agagcagccg gccgatgtcg tcgtggctcg ccgcaacgcc gcgtcgatcg
     4081 ccgacggcct cgaacagctc gagtccgcgc tccagttggc gccgtgagac gtcgagcgaa
     4141 cccgtgtcgc gatacagccg gccgatacgg ttgtgggcgg cgccgccctt gcccttcaac
     4201 ccgaggcgat aggcgagcgc gagcatttcg cggaaggcgg cgagcgcttc gtcggtgcga
     4261 ccgagctgaa cgagcacgtc gccgtgatcg tggagtgcgt cgagcctgcg ccgcgcgtcg
     4321 tcttcgccga gcagctcgag gccgcggcgg tagtgatcgt tggcgcgctt ttgcgcgtat
     4381 tgggcgcgcg cgaggccgcc ggaatcgatg tacgtgaagg cggcgcgcgt gcagcagccg
     4441 gcgagctcga ggtggcgcgc gagcatcgcc gagtactctt cctggctgcg cacgttgtct
     4501 ttttgcgcga gccaatcggc gatggtttga tggcgacgtc ggctcgccgc cggagaaatc
     4561 atctgcgcga tccgctcgcg ctcgaggttg tgcttgaaca cgtactcgat ttcgcccgga
     4621 aacgccgagt ccggcagacg caagacgtag tcacgctgca cgagctcggc gagcgcgcgt
     4681 tcgatctcga ccacgtcgtt ttccgccttg gggtcccaaa gatcgggcgc ctcgcgatcc
     4741 atgcgcgcga gcgcgaccaa gccgccgagc cagaacacgc tgcccatcgc ggccgcgtgc
     4801 tcgagcaggc ggcgctcgac ggccgaaagc acaccgagcc gcgcggacac ggcgtcttcc
     4861 atcgtcgtcg gcagtcgggc gtggttcagg cgatcgagat ccacggtcca gctcggggaa
     4921 gagccggcct cgcctgtctc gcgcaagacg ccgcagtcgt gaaagatccg caccatgtgg
     4981 gcgagcaggc ccgggttgcc gcccgccatc ccgaggccgg cctcgagtaa gcggtcgggc
     5041 ggaccgttct cgcagggggt gaggaacgcc tgaatgatcg cgcgcgcgtc gaggctcgac
     5101 acgggcccga gctcgatcag atcgtggcgc gggcccgaga tctcgagcca gcgctcgtga
     5161 cggctcaaga gatccggccg cgcgaggcac acgaggaaga tcggcccctt gagctcctgc
     5221 atcaggtaga cgagcagatc gagcgagtct tcgtcggcgt cctgcaaatc gtcgaagatg
     5281 aggcagagcg gtgtcttgcg tgcctccgcc tcgaaaaaac tccggagcac cgcgcgccga
     5341 atgagccgcg cctgaagcgg atcgtccatc accgcgcgcg tgaaggggct gtccgtgaac
     5401 gagaggccgc agagcccgcc caggaagtaa cagacgtcgc cgacgcgccg atcgtcgaga
     5461 atgctcgcga cctggtcgcg cacgcgaatc acgctcgcct cgtgcgaaag gccctcggtg
     5521 aggtcgaaag ccgaacggag caggctgtcg aagagcccgt aggcgagccc ctgcgcgcgg
     5581 gccgcaccgc ggtagacgcg ggggcgtcgc gtcgcgggca gctcgaccac gagctgttcg
     5641 gccaagcgcg ttttgccgat tccggcgggg cccacgaccg tggcgacgcg catctcgccg
     5701 cgcgccagca ccgagtcgta aatctgcttc aacagcgcaa gctccccgtc gcgcccgatg
     5761 acgggggcgc ggacgagggg cgcgacggtg gcaagagaag gctcgatctc gacgctcaag
     5821 ccgcgcgagt ctccccccgt tccccccgcc actcaaggct cggggcacga tctcaccggc
     5881 ccggagcgcc aggggcggca attgtagctc gaagcgcgtc gattccgcgc tcgggatcga
     5941 gaagcgtctt gcttcgggac cgagactcgg agaggctctc gaggctcgcc gttccaaaca
     6001 ttcgaaaaga ccccgttttg gtctatgctt ttcgttcacg cgtggcgcta cccgaacgaa
     6061 ccccagcaca gtctaccaac gccgagaaac gctcggtcgg acgcggcctt ttccgcaagt
     6121 gcgccggttg cggcgcggtc tcgacggtcg aagagctcag ggtccgtttc ctggtttgcg
     6181 gtagctgcgg tcatcatcac ccgatgcccg tcgaggaatg gatgcggctc ttgctcgacg
     6241 gcggcgagct cgaggtttgg gacgagcaca tcgcgccgac cgacccgctc gggttcgacg
     6301 acggcaagtc gtacccggaa cgtctcttgc gcgctcagcg caacacgggc ctcacggaag
     6361 ccatccgcat cggccgcggc cgtatcgaag agtgtccgat cgcgataggc atttttgcgt
     6421 tcggtttcat gggcggcagt atgggctcgg tcgtgggcga gcgcatcacg cgcttgttcg
     6481 agcgagcggc gctcgaacgg ctgccggtcg tgttgctcca ctcctcgggt ggtgctcgca
     6541 tgcaggaagg tattttgagc ttgatgcaga tggcgaagac cgtcgccgca cttggccgct
     6601 ttcgcgcgac ccgcaagccg tacttgagcg tgctcttgca cccgacgacg ggcggcgttg
     6661 ccgccagcac ggcgctactc ggcgacgtga acctcgccga accgaacgcg ctcatcggct
     6721 tcgccggacc gcgcgtgatc gagaacacgc tgcgaacgac cctgcccgag ggctttcaga
     6781 agtcggattt cttggtcgcg cacggaatgg tcgatgcaat cgtgccccgc ctcgagctgc
     6841 gcgcgagcct tcggaccttg ctcggccatc tcgcggggag cgcggcttga gcgatttgaa
     6901 aaggactttg gagcggctct acgcgctcgt gccgcgcggc cagaagctcg ggctcgagcg
     6961 catgcaggcc gcgtgtgagc ggttcggcca tcccgagcgc gcgttcgagg cgattcacgt
     7021 cgccgggacg aacggcaagg gcacggtctg cgcattcacg gcgtcgatgg cgcgcgccgg
     7081 cgggcgtcgc gtcggcatgt acacgtcgcc gcacctgaac cgattcgccg aacgcatcca
     7141 gatcgacggc cagcccgtcg acgacgacac gctcgtgcgg ctcctgaacc aggtgatgga
     7201 cgcggcgccc gatctcacct ttttcgaggt cgcaacgctg gcagctttca tggctttccg
     7261 cgatgcggca gtcgatctcg ccgtgctcga ggtgggcctc ggcggccggc tcgacgcgac
     7321 caacgtgatc cccccgccgc gcgtcgccgc catcacgcgc gtctccttcg atcacatggt
     7381 cgagctcggc gacacgctcg gcaagattgc cgccgagaag gccgggatca tcaagaccgg
     7441 cggggccgtc gtgctcggca agatccatcc cgaagcgcgc gccgtcatcg aagcccagat
     7501 ccagtccgtc ggcgcgcggc tgatcccgct cggcacaccg gagccgatcc ccggcgcgcc
     7561 cctcgcctac ccgcgcatcg ccctcgtggg ctcgaacctg gcggtggcag tcacgatcgg
     7621 ccgcgagctc ggcattacgc ccgacctctt ggcgcaaggg ctcgaggcga cgcagtggcc
     7681 cggacgcaac gagcttttgc accgcaacgg ccaggaactc acgctgctcg actgcgcgca
     7741 caatccggac ggcgccgtcg cgctctccca cgcgctcgat ccgagcgtgc tcggcgagat
     7801 cgagtcgcgg cgcgagatcg cgctcgtctt cggcacgctt cacaccaaga actggcgcgc
     7861 aatgctacgc cgcctggaaa acgtggcagg acaccgcgtc tatgtagcgc cgcccgtggc
     7921 caaggccgtg gatccccgcg agatggcgaa ctttttgcct ggtgaagtcg ccagcgacgt
     7981 ggggcaggcg ctcgaccgtg ctcgcgcgct ggtgggtcct cgcggcgtcg tcgtcgtgac
     8041 tgggtctacc ttcttggtcg gaccggcccg cgcgctactc ttgaacttgc aaagcgaccc
     8101 gccggtcgcg ttgtaaactt tccaccctgg actcgaaccc agtgacacgc cacctcttcg
     8161 ggaccgacgg gattcgcgga cgcgccggca tcgagccgat gacacccgag ctggcgttga
     8221 acctcggtcg cgccattgct tacgtcgctc gccgcgggcg ctcgcgcatc ccccgcatcg
     8281 tcatcggcaa ggacacgcgc gtctcgggct acatgctcga acaagcgctc gcggccggca
     8341 tctgcgccat gggcggccgc gtgctcctca ccgggcccat tccgacgccc gcggtcgcga
     8401 acctcacgca gacgatgcgc gccgacgccg gtgtcgtcat cagcgccagc cacaacccct
     8461 tcgccgataa cggcatcaag ctcttcggcc ccgacggcta caagctcccc gacgaggaag
     8521 aggccgcgat cgaagccttg ctggtcgatc cgaagctgct ttcactcagc aaacacggca
     8581 gcggcgtcgg tcgcgccgag cgcttggacg acgccttcgg gcgctacgtc gtgtatgcca
     8641 aaggcacttt cccgcgcgag ctcacgctgc acgggctgaa gatcgtcgtc gatgcagccc
     8701 acggcgcagc ctaccgtgtc gcgccagccg tgctcgccga gctcggcgcc gacgtctgct
     8761 gcatcggctg tcggccgaac ggcgtgaaca tcaatcgtct cgcgggcgcg ctgcacccga
     8821 atcaggtcgc ggccgaggtg aagaagcgca aggcgcacct cggcgtcgcc ctcgacggcg
     8881 atgcggatcg cgtggtcttc gtcgatgaac acggcgaact cgtcgacggc gacgccgtga
     8941 tggcgctctg cggtacgcgc ctggcacgcg ccggacgtct cgccaagggc accgtcgtcg
     9001 cgaccgtcat gagcaacatg ggcctcgagc gcgcgctcgc cgccgcgggc gcgaaacttc
     9061 gccggacggc cgtcggcgat cgttacgtca tggaagagat gcgcaaggac ggcctcacgt
     9121 tcggcggcga gcagtcgggc cacctgattt tcgcggagca cgccacgacg ggcgacggca
     9181 ccgtcgcggc tctgcaggtg ctcgccatca tgctgcgcga ggagcgtccg ctcagcgagc
     9241 tcgcgcgcgg tatggaacgt gtgccccagc tgctcgagag cgtgaagctg ccgtcacggc
     9301 gcccgctcga ggaaatggcc gagctcacgc agcgcatcgc cgccgccgag gccgagctcg
     9361 gcacgagcgg ccgggtgctc gtgcgctgga gcggcacgga gccgaaactc cgcttgatgc
     9421 tcgaaggccc cgaccctgcc gcgctcagga cgatgctgac cgagctcgcg gaagccgccc
     9481 agcgcgacac ggcaagccgc gccgcgagct gagcgtcttc ggggccggac gctgcccatc
     9541 ctcgttcttt atctagcgct ggcgaactcg gccggcgccg ctccccccgt cgcgcgacca
     9601 tggacgctcg aagccggcgc cgagcacctc tggcccacgc acgccgatcg acgaatcgag
     9661 acgacatcgc tgaacgtgct gattggcagg caggtgttcg agacgtgctg cttcgcctgg
     9721 cgagccggga tcaccgccac gtccgcgacc ggctacatcg tccagttcga tgaacacctc
     9781 cacgacaccc aactcgagag caacgcggtc ggcatcggcc caacggcggt cctgcgcctt
     9841 cagacgccgg agctcgcgcg ctgggtgctg agcttcgagg gcagcggagc tttcattctc
     9901 tacagtcgcc acttcccggc gggcggcgac gtgtacaact tcatgtggcg cgccgggccg
     9961 tccctgagct accgcttcga cgatacctgg tccgccggag ccggcgcgcg cgtgatgcac
    10021 gtctccaacg gacagggcct cacccctaaa aacccgtctt atgcggcttt gggagtgacc
    10081 ctctggctcg cgtggcggct gtgatcgctg ggactcccag ggcgccaccg cggccaaacg
    10141 ccgaggtcgc acgctcgagc accgtaacaa aaagcgttcg gcgcggggcc cttgcgagca
    10201 cccgcgccga aatc
//
LOCUS       DATIML010001208         1662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4876031, whole genome shotgun sequence.
ACCESSION   DATIML010001208 DATIML010000000
VERSION     DATIML010001208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4876031"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..1331
                     /locus_tag="VLJ38_20875"
     CDS             234..1331
                     /locus_tag="VLJ38_20875"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF025114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU42052.1"
                     /translation="MQTRASFDVIVIGAGQAGLSVAYHLARTGLRFLVLDDHARVGDV
                     WRERWDSLRLFTPARFDGLDGMPFPAPPSYFPTKDEMADYLEAYAAQFELPVLCGVRV
                     ERLSRSERGFRIEAGERVFEAARVVVGMSSFQKGAVPSWAKELAPDIVALHSANYRTP
                     SQLEPGGVLLVGAGNSGSEIALEVARTHPVVMSGRDTGEVPFRIASFWGRFVLARLIL
                     RVLFHRILTIRTPMGRRARPRVLGRGDPLIRVRAADLARAGVKRVARTAGVKNGRPVL
                     EDGSVPDVRNVIFCNGYSPNLSWIDLPIFDERGEPRHVGGVVTDAPGLYFVGLKFLYA
                     FSSTMIHGVGRDAERIVKTLAAELSTQRRAA"
     gene            complement(1366..>1662)
                     /locus_tag="VLJ38_20880"
     CDS             complement(1366..>1662)
                     /locus_tag="VLJ38_20880"
                     /inference="COORDINATES: protein motif:HMM:NF044751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42053.1"
                     /translation="AGDRLPWLGPEGSEHDNFAPLASLAWQVHVYGRAEPAFTAFCAQ
                     RGLPLHVFAWSTEAAHAGFAENASYLVRPDGYVAFAEAAQSTEKLAQYLAAHLA"
BASE COUNT          249 a          546 c          583 g          284 t
ORIGIN      
        1 agtgaaaaga cggtggaccg gcacgtgagc aatatcttca gcaagctcgg cgtctcctcc
       61 cgcgccgccg ccaccgcgtt cgcgtacgag cacaggctga ttgccggctg aagagggcac
      121 gtgggtagaa ctacccacgt ctgaaaagcg cacggcgtgg gtagctcacc cgaagcggcg
      181 acggcgagcg ctgccctagg ttcatcggcg aggcacggcc tcggaggtga atcatgcaaa
      241 cacgagcttc tttcgacgtg atcgtcatcg gcgcgggcca agcaggcctt tccgtcgcgt
      301 accacctggc gcgcacgggc ttgcgcttct tggtgctcga cgaccacgcc cgcgtcggtg
      361 acgtctggcg cgagcgctgg gattcgctcc ggctcttcac gcctgcccgc ttcgacggcc
      421 tcgacggcat gccgtttccg gcgccgccga gctactttcc caccaaggac gagatggcgg
      481 actatctcga agcgtacgcc gcgcagttcg agctcccggt cctctgcggc gtgcgcgtcg
      541 aacggctgtc gcgtagcgag cgcggcttcc ggatcgaagc gggcgagcgc gtgttcgagg
      601 ccgctcgcgt ggtcgtcggc atgagtagct ttcagaaggg tgccgtgccg tcctgggcga
      661 aggagctcgc gccggacatc gtcgcgcttc actcggcgaa ctaccgcacg ccgtcgcagc
      721 tcgagccggg cggcgtgctg ctcgtcggcg ccggcaattc cgggtcggaa atcgcgctcg
      781 aggtcgcgcg cacgcacccg gtcgtgatgt cgggccgcga cacgggcgag gtgcccttca
      841 ggatcgcgag tttttggggg cgcttcgtgc tcgcacggct gattttgcgc gtgctttttc
      901 accgcattct gacgattcgc acgcccatgg gccggcgcgc tcggccccgc gtgctcgggc
      961 gcggcgatcc gttgattcgc gtgcgcgcgg ccgatctggc gcgcgccgga gtgaagcgcg
     1021 tcgcgcgcac ggccggcgtg aaaaacgggc gcccggtgct cgaagacggc agcgtccccg
     1081 acgtgaggaa cgtcatcttc tgcaacggct actctccgaa cctgagctgg atcgatttac
     1141 cgatcttcga cgagcgcggc gagccacgtc acgtgggcgg cgtggtcacg gacgcacctg
     1201 ggctctactt cgtcgggctg aagtttctgt acgcgttctc ctcgacgatg attcacggcg
     1261 tcgggcgcga cgccgaacgg attgtgaaaa cgctcgcggc cgagctgtcg acgcaacgcc
     1321 gagctgcgta gcgcggccca cggcgtgagc cggctcgcgc ggtggtcagg cgaggtgtgc
     1381 ggccaggtac tgcgcgagct tttcggtact ttgcgcggct tccgcgaacg ccacgtagcc
     1441 gtcgggccgc acgaggtagc tcgcgttctc ggcgaagccc gcgtgagcgg cctccgtgct
     1501 ccaggcaaag acgtggagcg gcaggccacg ttgggcgcag aaggccgtaa atgcaggctc
     1561 tgcgcggccg tagacgtgca cttgccaagc cagcgacgcg agcggcgcga agttgtcgtg
     1621 ctccgagcct tcggggccga gccaaggcaa ccgatcgccc gc
//
LOCUS       DATIML010001209         3503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2562701, whole genome shotgun sequence.
ACCESSION   DATIML010001209 DATIML010000000
VERSION     DATIML010001209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3503
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2562701"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..861)
                     /locus_tag="VLJ38_20885"
     CDS             complement(<1..861)
                     /locus_tag="VLJ38_20885"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSU42054.1"
                     /translation="MTHMVRRLLVENPASRFERFRVEYEEGAPPASLDIYEDQSHTIL
                     SENDSPDLGFRFSVNPYRGCLHGCAYCYARPSHEYLGFGAGSDFERKLVVKRRAAELL
                     AAAFDKKSWTGELVVFSGNTDCYQPLEKELELTRGCLDVCARYRNPVHVITKSVLVER
                     DIDLLTKLRDEAHASVTLSIPFLDVDTSRAIEPYAPPPSRRIEAVRRLAAAGIAVGVN
                     IAPLIPGLNDRAVVPILEAVADAGATSAGIVPLRLPGAVAEVFTERLRDALPLAAEKV
                     LTRVREMRGGK"
     gene            962..2860
                     /gene="dnaG"
                     /locus_tag="VLJ38_20890"
     CDS             962..2860
                     /gene="dnaG"
                     /locus_tag="VLJ38_20890"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HSU42055.1"
                     /translation="MIGQETLDRVRRDVNIVEIVSESVKLQKRGRSHVGLCPFHKEKT
                     PSFHVNPERGFYHCFGCHASGDAIKFVQETEGLEFIEAVRSLAERLGIDVIETATDAE
                     RRQHQESRRRQQELYELGAQAARFFERMLREHPLKDSAEQELARRGLVPSTPTDAIAD
                     ALQAFRVGYAPYGWDELSKHLRDFGASLGAAEKVGLVMPRKSGSGYYDRFRHRLMFAV
                     LDGQGRVIAFSGRALDEPEPARLRALGLEPNTSPEPPAKYMNSPESPVYKKREAVFGL
                     YQARQALRSADRAVIVEGNFDVLSLHARGLKHVVAPLGTAFTIEQARSIRRLTQEVTL
                     LFDPDEAGRRAVRSARDVCREAGLSARVASLPAGADPDELVRRGGIEHAERVLAAAQP
                     LAEFLINELVDGYRALNDADAQARCVRDIIALIASEDDPTARALAEQHARRRLAGALG
                     LREVPTLAAIERQLATAGPARPQSTAQAIPRVQPPHRARSRDRREELGLEILGALLDF
                     PELFESPEATAAASLLEGDVAAALAAMRQAHESGITDSEVMLAKLSAPIHPFALARTA
                     APKHERLVDAKAELVGNLRRLESFDLSREKSLGMSELQQLEKTGNVDDELTILRRVWD
                     KARERRGV"
     gene            2895..>3503
                     /locus_tag="VLJ38_20895"
     CDS             2895..>3503
                     /locus_tag="VLJ38_20895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor region1.1
                     domain-containing protein"
                     /protein_id="HSU42056.1"
                     /translation="MPSKKPERSPKKPAVNESKKGSPPPKVKASVAKSPKDGSPSSAP
                     DSGAKPNGKSAKEQLISLGKSKGFLTYDDVHEALPGEDVGPDQMDDVLSALDDEDIEV
                     VDDANNIKIAPHRGGEDEMAAKSPAKSTDGEEPAESGQPASTVAKGGDDDLYKSNDPV
                     RMYLRKMGSVSLLTRDGEVEIAKRIEEGEIEVLDAVLGTPICL"
BASE COUNT          651 a         1137 c         1179 g          536 t
ORIGIN      
        1 cttgccgccg cgcatttcac ggacgcgggt gagcaccttt tccgcggcga gcggcagcgc
       61 gtcgcgcagg cgctcggtga agacctcagc gacggcgccg ggcaggcgca gcggcacgat
      121 gccggcgctg gtcgctcccg cgtccgccac ggcctcgagg atggggacca cggcgcggtc
      181 gttgaggccg gggatgagcg gcgcgatgtt gacgccgacg gcgatgcccg ccgcggccag
      241 gcgccgcacg gcttcgatcc ggcggctcgg cggcggcgcg tacggttcga tcgcgcgcga
      301 cgtgtcgacg tcgagaaacg gaatgctgag cgtgacgctt gcgtgcgcct cgtcacggag
      361 cttcgtcaag agatcgatgt cgcgctcgac gagcacgctc ttcgtgatga cgtggacggg
      421 gttacggtag cgagcacaca cgtcgaggca gccgcgcgtg agctcgagct ccttttcgag
      481 cggctggtag caatcggtgt tgccgctgaa gacgacgagc tcgcccgtcc agctcttctt
      541 gtcgaacgcc gccgccaaga gctccgccgc ccggcgcttg acgaccagct tgcgctcgaa
      601 gtcgctgccc gcgccgaagc ccaaatattc gtgcgacggt cgcgcgtaac agtacgcgca
      661 gccgtgcagg cagccgcgat acgggttcac gctgaagcga aagccgagat ccgggctgtc
      721 gttttccgac agaatcgtgt ggctctggtc ctcgtaaatg tcgagcgagg ccggcggagc
      781 gccctcctcg tattcgacgc ggaaacgctc gaagcgactc gccggatttt cgacaagcag
      841 acggcggacc atgtgggtca tgctatactg aacagacgct cagtcaaggt ccccgaacga
      901 gacccgctct tcgctccacg aaacggtccg tcgagggcca aagtgatgct aggcgtgtcg
      961 tgtgatcggt caggagacgc tcgatcgcgt ccgtcgggac gtgaacatcg tcgagatcgt
     1021 gtccgagagc gtgaagctcc agaagcgcgg gcgcagtcac gtcgggctct gcccttttca
     1081 caaagagaag acgccgagct ttcacgtgaa cccggagcgg ggcttttacc attgcttcgg
     1141 ctgccacgcg tcgggggacg ccatcaagtt cgtgcaggaa accgaagggc tcgagttcat
     1201 cgaggccgtg cgcagcctcg ccgaacgact cggtatcgac gtgatcgaaa cggcgaccga
     1261 cgcggaacgt cgccaacacc aggagtcgcg ccgccggcaa caagagctct acgagctcgg
     1321 cgcgcaggca gcccgcttct tcgagcgcat gctgcgggaa catccgctca aagacagcgc
     1381 tgaacaggag ctcgcgcggc gtggcctcgt accgagcacg ccgaccgacg cgatcgcgga
     1441 cgcgctgcaa gccttccgcg tcggctacgc accttacggt tgggacgagc tctcgaagca
     1501 cctgcgcgat ttcggcgcga gcctcggcgc ggccgagaag gtcgggctcg tcatgccccg
     1561 caagtcgggc tcgggctact acgaccgctt tcggcatcgt ctgatgttcg ccgtcctcga
     1621 cgggcagggt cgcgtgatcg ccttcagtgg ccgcgcgctc gacgagccgg aacccgcgcg
     1681 tttgcgcgcg ctcggcctcg aaccgaacac gagtccggag ccgccagcga agtacatgaa
     1741 ctcgccggag tcgcccgttt acaagaaacg cgaagcggtg ttcgggctgt accaagcgcg
     1801 ccaggcgctc aggagcgcgg accgcgccgt gatcgtcgag ggcaacttcg acgtactcag
     1861 tctgcacgcg cgcgggctca agcacgtggt cgcgccgctc ggcacggcgt tcaccatcga
     1921 acaggcgcgc agcattcgac gcctcacgca agaggtgacg ctcctgttcg atccggacga
     1981 ggcggggcgg cgcgccgtgc gcagcgcgcg cgacgtgtgt cgcgaggcgg gcttgagcgc
     2041 gcgggtcgct tcgctgccgg cgggcgccga tccggacgag ctcgtgcggc gtggcgggat
     2101 cgaacacgcc gagcgcgtgc tcgctgccgc acaaccgctc gcggagtttt tgatcaacga
     2161 gctcgtcgac ggctatcgcg cgctgaacga cgcggacgca caggcgcgct gcgtgcggga
     2221 catcatcgcg ctcatcgcga gcgaggacga tcccacggcc cgggcgctcg ccgagcagca
     2281 cgcgcggcgg cggctagcgg gagcgctcgg cttgcgcgaa gtgccgacac tggcggccat
     2341 cgagcgccaa ctcgctaccg ccgggccagc tcgaccgcag tcgacagcac aagctatccc
     2401 cagggttcag cctccgcatc gcgcccggtc gcgcgaccgg cgtgaagagc tcggcctcga
     2461 aatcctgggc gctctcctcg attttcccga gcttttcgag tctccggagg cgacagcggc
     2521 ggcctcattg ctcgaaggcg acgtggcggc agctcttgct gcgatgcgtc aagcgcacga
     2581 gtccggcatt accgattccg aagtaatgct tgcgaagctg tcggctccga tccatccatt
     2641 cgcgctcgcc cgaacggccg cgcccaagca tgaacgcctg gtcgatgcta aggccgagtt
     2701 ggtcggaaac ttgagaaggc tagagtcgtt cgatttgtct cgtgaaaagt ctctcggcat
     2761 gagcgaactc cagcagcttg agaaaaccgg caacgtcgac gacgagctta caatcttgcg
     2821 acgtgtctgg gacaaagcac gtgagcgccg cggcgtatga aatacgccaa acgcgcaatt
     2881 actaagaggt agcggtgcca tcgaagaagc ctgagcgctc cccgaagaag cctgccgtca
     2941 acgagtcgaa gaaggggtcg cccccaccga aggtcaaagc ctcggtggcg aaatccccga
     3001 aagacggctc accttcctcg gcgccggact ccggtgccaa gcccaacggc aagagcgcga
     3061 aagagcagct catcagcctg ggcaagagca aggggttcct tacttacgac gacgtgcacg
     3121 aagcgttgcc tggcgaggac gtaggtcccg accagatgga cgacgtgctc tcggcgctcg
     3181 acgacgagga catcgaagtc gtcgacgacg cgaacaacat caagatcgcg ccgcaccgcg
     3241 gcggcgagga cgagatggcg gcgaaatcgc cggccaagag caccgacggc gaagaacccg
     3301 ccgagagcgg gcagcctgcg tccaccgtgg ccaagggtgg cgacgacgat ctctacaaga
     3361 gcaacgaccc cgtgcgcatg tacctgcgca agatgggatc ggtctcgctg ctcacccgcg
     3421 atggtgaagt cgagatcgcc aagcgcatcg aagagggcga gatcgaggtc ctcgacgccg
     3481 tgctcgggac gccgatctgt ctg
//
LOCUS       DATIML010001210         2520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5167132, whole genome shotgun sequence.
ACCESSION   DATIML010001210 DATIML010000000
VERSION     DATIML010001210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5167132"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /locus_tag="VLJ38_20900"
     CDS             <1..898
                     /locus_tag="VLJ38_20900"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU42057.1"
                     /translation="LARALQTLRETQVELVRSERMASIAVLVKGIAHELNNPINYIAG
                     NVGPLRRYSAFLAQVALKLADGRPRSPEELTALTELAPGKDLAFVVADLERLTADLGE
                     GARRAALIIGDLQNLTSVSRREVELVDVDRAVRQTVSLIAPRTPESVRLELTVSDLPR
                     LRARAGELEQLLINLLDNAVRAVGSRGTVRVVARALEGQVVLSVSDDGDGMPDAVKLR
                     AFEPFFTTRGAGEGSGLGLAIVASIVKAHRGSITLDSQPGRGTTFTVALPVSTADPLV
                     RDTAPANFPSLRDDGAGRSDGK"
     gene            1048..1761
                     /locus_tag="VLJ38_20905"
     CDS             1048..1761
                     /locus_tag="VLJ38_20905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42058.1"
                     /translation="MTTYRHAYVRGALMLALLTGCGGLTVDVPTPEPASAAPTDAGTD
                     TLDDAAPDGADASQGYTNQSCPVPSAPLAASCPCSRRACSAVSMSCPRGSGTSKTRRI
                     GADGGTAALDGTRATRGVPFSVTAFAGSLTKPVDVKLSELAAPTPDGYEDWSPIFALE
                     PFSLEFVNGAALEIPWAVPHAGGGTISRELTTFTSASLDGPWQPLADNYVNAGFCQAT
                     LLTGGYFFVGYTAPSDACH"
     gene            complement(1863..>2520)
                     /locus_tag="VLJ38_20910"
     CDS             complement(1863..>2520)
                     /locus_tag="VLJ38_20910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HSU42059.1"
                     /translation="TKLAVAELEQSLLAAGLSVAALHGDLEQRDRERVMAKFRNGSTR
                     ILLATDVAARGIDLDSLGLVVNFDLPSQPELYVHRIGRTGRAGRSGLALSLCAPRDEP
                     KLAAIEAYTGVALTAVQPEAGAQERTTPSHAAVASKPAPMDTLRISGGRKDKLRPADI
                     LGALTGEAGGLAGDDVGKIEIHDRFSFVAVKRAVSEKALASLRAGRIKGRRFRSERVD
                     "
BASE COUNT          377 a          896 c          841 g          406 t
ORIGIN      
        1 actcgcccgc gcgctccaga ccctgcgtga aactcaggtg gagctcgtgc ggtccgaacg
       61 catggcatcc atcgccgtgc tcgtcaaagg catcgcgcac gagctcaaca atcccatcaa
      121 ctacatcgcc ggcaacgtcg ggccgctccg ccgctattcg gcgttccttg cgcaggtggc
      181 gctaaagctc gccgatggcc gaccgcgcag cccggaagag ctgacagcgc tcaccgagct
      241 cgcgcctggc aaggatctcg cgttcgtcgt cgccgatctc gagcgtctga ccgccgatct
      301 gggggaaggc gcacgccgag cggcgctcat catcggtgac ctgcagaacc tcacctcagt
      361 gtcgcgccgc gaagtcgagc tcgtcgacgt ggatcgcgcc gtgcgccaga ccgtgtcgct
      421 catcgctccg cgcacgccgg agagcgttcg actggaactc acggtctccg acctaccgcg
      481 gctccgcgcc cgcgcggggg agctcgagca gctgctcatc aacctgctcg acaacgcggt
      541 gcgcgccgtc ggctcacgcg gcacggtgcg tgtcgtcgca cgcgcgctcg agggtcaagt
      601 ggtgctcagt gtgtccgacg acggtgacgg catgccggac gccgtgaagc tccgcgcgtt
      661 cgagccgttc ttcacgacgc gtggggccgg cgagggcagc gggctcgggc tcgccatcgt
      721 cgcgtcgatc gtgaaggcgc accgcggctc gatcacgctc gatagccagc cggggcgcgg
      781 caccaccttt accgtcgcgc taccggtctc gaccgccgac cctctcgttc gtgacaccgc
      841 ccccgcgaac tttccctcgc ttcgagacga cggcgcgggc cgaagtgacg gaaagtgacg
      901 gataccgccc gtcacttcca gcgtgcgcac gtcgcctcgc cgctccaccg cagcccgtca
      961 gcacgcgttt aggcgcgcgc gtgcggtctg cgtcgtttag ccgaagccgc gacgcgagcg
     1021 gcatggcgtt tgctggaggg cttcgcgatg acgacttatc ggcacgctta cgttcggggc
     1081 gcgttgatgc tcgcgctgct caccggctgc ggcgggttga ccgtcgacgt gccgactccg
     1141 gagccagcct cggcagcgcc gacggacgcg gggaccgaca cgctggacga cgctgcaccc
     1201 gacggagcgg acgcgtcgca aggctacacc aatcagtcgt gtccagttcc gagcgcgccg
     1261 ctcgctgcga gctgtccgtg cagtcggcgg gcctgttcgg cggtgagcat gagctgcccg
     1321 cgcggctcgg ggacatcgaa gaccaggcgc atcggggccg acggtgggac cgcagctctg
     1381 gacggaacgc gagcgacgcg aggggtgcct ttctccgtaa cggcctttgc cgggtccctc
     1441 actaaacctg tcgacgtgaa gctcagcgag ctcgctgcgc cgacgccgga cggctacgaa
     1501 gactggtcgc ccattttcgc gctcgagccg ttctcactcg agttcgtcaa tggtgctgcg
     1561 ctcgaaattc cttgggcggt gccgcacgca ggaggtggaa ccatctcgag agagctcacg
     1621 accttcacgt ccgcgagcct ggacggtccc tggcagcctc tcgccgacaa ctacgtgaac
     1681 gccggtttct gccaggccac gctgctcacc ggcggctact tcttcgtcgg ctacacggcg
     1741 ccgagcgatg cctgtcactg aaatcggcgg cctgcgccgc acgctcccct ccctgcagcc
     1801 cgtccccgaa ctaccggcca gggcggcggc cgcgaaccgg acaccccacg tggttgcgcc
     1861 cgctagtcga cacgctcact gcgaaagcga cggcccttga tgcggccggc gcggagactc
     1921 gcgagtgcct tttcgctcac ggcgcgcttc accgcgacga acgagaaccg atcgtgaatt
     1981 tcgatcttgc cgacgtcgtc gcccgcgagc ccgcccgctt cgcccgtgag cgcgcccagg
     2041 atgtcggccg gtcggagctt gtctttgcgg ccgccggaga tacgcaaggt gtccatcggc
     2101 gccggcttcg acgcgacggc agcgtgagac ggcgtcgtac gttcttgtgc tccggcctcg
     2161 ggctgaaccg ccgtgagagc gacccccgtg taagcttcga tcgccgcgag cttcggctcg
     2221 tcgcgcggcg cgcacagcga gagcgcgagg cccgagcgcc cggcgcggcc cgtgcgcccg
     2281 atgcgatgaa catagagctc cggctggctc ggtaagtcga aattgaccac cagcccgagg
     2341 ctgtcgagat cgatgccgcg tgccgcgacg tccgtcgcga ggaggatgcg cgtactgccg
     2401 ttgcgaaact tcgccatcac gcgctcgcga tcgcgttgct cgaggtcccc gtgcagcgcg
     2461 gcgacgctga ggcccgcggc gagcaggctc tgctcgagtt cggcgacggc gagcttcgtg
//
LOCUS       DATIML010001211         2663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1120021, whole genome shotgun sequence.
ACCESSION   DATIML010001211 DATIML010000000
VERSION     DATIML010001211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1120021"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VLJ38_20915"
     CDS             <1..586
                     /locus_tag="VLJ38_20915"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSU42060.1"
                     /translation="ERWLFYFKHNQNADELEEQLMQLLEAGDREGAEALLDKMKARSF
                     EAETIRPALKYLDAGPEAFTDCVDAEFVKVRQDCERGMNLLATLGNNAPFIGLMGTVI
                     GVIISFQKLGQSQGANSMSSVMGGIAEALVSTGVGLFLALPAVVAYNILSKKVETIDG
                     NVQSITKHITAFIKAQRSTERTAVRSVSMMEEAS"
     gene            589..1005
                     /locus_tag="VLJ38_20920"
     CDS             589..1005
                     /locus_tag="VLJ38_20920"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSU42061.1"
                     /translation="MAGTTSRRGGKSGPIMGINITPMVDVMLVLLVIMMVSAVYIVSQ
                     TLKVTLPKTANSDAPAESPFAVTITKEGRYLYDQKPIEEAGLVQKLKQAKAQKKDPSL
                     VVTADKEAFHGDVVHVIDLAKSEGITKFAINVEREN"
     gene            1033..1728
                     /locus_tag="VLJ38_20925"
     CDS             1033..1728
                     /locus_tag="VLJ38_20925"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HSU42062.1"
                     /translation="MARRSNKSSKVYAVSIGVHLAIGLAIAFIPKDKLKEIIAISMGE
                     SKPKPPPPKPHEEKPHETRPRIAAAHGGGSKSSSSLNGTAAAAAPVFTDIGISMDANG
                     SEGLAVAVAPKALPPPKPLALEPAKPKLLAAHTTTECEEPLVKAHPERVVRPEFTTEA
                     RTAGIDGVVLIELELDDRGNVVSAKVKKGLGHGLDEASLDAAKRTPFVPATRCGRPVA
                     APLVIKMRFSLAT"
     gene            1778..>2663
                     /locus_tag="VLJ38_20930"
     CDS             1778..>2663
                     /locus_tag="VLJ38_20930"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HSU42063.1"
                     /translation="MTKTHLGLLFVTLVATPGLAHAQGAPKPLAPAAKPAGSGNTLGT
                     ARGVVTKPPRVSHFVAPALPEGTKLDEKQTVELEIAIGADGKVSDATVLDGSGVDAVD
                     EAARTAALALEFEPAEIDGAPAPVRIKYRYEIEPTVPVEIVPATATFAGTVTDSKTKQ
                     PLSGVKVELDSGQKATTGDDGHFVLEGVAPGTHSVTLSGPTFTPIGTEETLAGGRRYE
                     ASYEVEVAAAATADEERADFEVVIVATKLGSKITSTEVTAEQGTRVAGTGGDVGKVVE
                     NLPGVARSTVGSGAIVVWG"
BASE COUNT          517 a          891 c          869 g          386 t
ORIGIN      
        1 cgagcgctgg cttttttact tcaagcacaa ccagaacgcc gatgagctcg aagagcagct
       61 catgcaactg ctcgaggccg gcgaccgcga aggcgccgaa gcgctgctcg acaagatgaa
      121 ggcgcgctcg ttcgaggccg agacgattcg gccggcgctc aagtacctcg acgcgggccc
      181 ggaagcgttc acggattgcg tggacgccga gttcgtgaag gtgcgccagg actgcgagcg
      241 cgggatgaat ctgctcgcga cgctcggcaa caacgcgccg ttcatcggcc tcatgggtac
      301 ggtcatcggc gtcatcatct cgttccagaa gctcggccaa agccagggcg cgaactcgat
      361 gagctcggtg atgggcggta tcgccgaagc gctggtgtcg acgggcgtgg gcctgttcct
      421 cgcgttgccg gccgtcgtcg cctacaacat cctttcgaag aaggtcgaga ccatcgacgg
      481 caacgtccag tcgatcacca agcacatcac cgccttcatc aaagcgcagc ggtcaacgga
      541 gcgtacggca gtccgctccg tcagcatgat ggaagaggcg agttagccat ggccggcacg
      601 acctcgcgca gaggcggcaa gagcgggccc atcatgggca tcaacatcac gcccatggtc
      661 gacgtgatgc tggtgttgct cgtgatcatg atggtttcgg cggtctacat cgtctcgcag
      721 acgttgaagg tgacgctgcc gaagacggcg aattcggacg cccccgccga gtcacccttc
      781 gcggtcacga tcacgaaaga aggccgctat ctctacgatc agaagccgat cgaagaggca
      841 ggactcgtgc agaagctgaa gcaagccaag gcgcagaaga aggacccgag cctggtcgtg
      901 accgccgaca aggaagcctt ccacggcgac gtcgtgcacg tgatcgatct cgccaagagc
      961 gaaggcatca ccaagttcgc gatcaacgtc gagcgcgaga actgacccgc attcgcacac
     1021 acggtacctc gcatggcccg ccgcagtaac aagagctcca aggtttacgc cgtcagcatc
     1081 ggcgtgcacc tcgcgatcgg gcttgcgatt gcgttcatcc ccaaggacaa gctcaaagag
     1141 atcatcgcga tttcgatggg cgagagcaaa ccgaagccgc cgccgccgaa gccgcacgag
     1201 gagaagccgc acgagacgcg gccgcgcatc gccgcggctc acggcggcgg ctcgaagagc
     1261 tcgagcagcc tcaacgggac ggccgcggcc gccgcgccgg tattcaccga catcggcatt
     1321 tccatggacg cgaacggcag tgagggcctc gccgtggcgg tcgcgccgaa agcgctgccg
     1381 ccgcccaagc cgctcgcgct cgagcccgcg aaacccaagt tgctcgccgc gcacacgacg
     1441 acggagtgcg aggaaccgct cgtcaaggct catccggagc gcgtcgtgcg accggagttc
     1501 acgaccgaag cgcgcacggc cggcatcgac ggcgtcgtat tgatcgagct cgaactcgac
     1561 gatcgcggca acgtcgtctc ggcgaaggtg aagaagggac tcgggcacgg cctcgacgag
     1621 gcgtcgctcg acgcggccaa gcgcactcct ttcgtgcccg cgacccgctg cggcaggccc
     1681 gtcgccgcgc cgctcgtcat caagatgcgt ttctcgcttg ccacatgaac gacgcccact
     1741 cggctttcgg ctcctgcttc cgcttcgact tcgagcgatg accaaaacgc acctcggtct
     1801 actcttcgtg actttggtcg cgacgccggg tctcgctcac gcgcagggcg cgccgaagcc
     1861 gctggccccc gccgcgaagc cggccggcag cgggaacacg ctcggaacgg ctcgcggcgt
     1921 cgtgaccaag ccccctcgcg tctcgcactt cgtcgccccg gccttgcccg agggcacgaa
     1981 gctcgacgaa aagcagacgg tcgagctcga aatcgcgatc ggcgccgacg gcaaagtgag
     2041 cgacgcgacg gtgctggacg gctccggtgt cgacgccgtc gacgaggccg cgcgcaccgc
     2101 ggcgctcgcg ctcgagttcg agcccgccga aatcgacggc gctccggcgc cggtgcgcat
     2161 caagtaccgc tacgaaatcg agccgaccgt ccccgtcgaa atcgtacccg ctacggcgac
     2221 gttcgccggc acggtcaccg actcgaagac gaaacagccg ctcagcggcg tgaaggtcga
     2281 gctcgattcc ggccagaaag cgaccacggg cgacgacggt cacttcgtgc tcgagggcgt
     2341 cgcgcccggg acgcactccg tgacgctctc gggtccgacg tttacgccaa tcggtaccga
     2401 agagacgctc gcgggcggcc gtcgctacga agcgagctat gaagtcgaag tcgccgccgc
     2461 cgcgaccgcg gacgaagagc gcgccgattt cgaggtcgtg atcgtcgcga ccaagctagg
     2521 cagcaagatc acctctacgg aggtgaccgc tgaacagggc acgcgcgtgg cgggcacggg
     2581 cggcgacgtg ggcaaagtcg tcgagaacct cccgggcgtc gcgcgttcga cggtcggctc
     2641 gggcgccatc gtcgtctggg gcg
//
LOCUS       DATIML010001212         2955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4296255, whole genome shotgun sequence.
ACCESSION   DATIML010001212 DATIML010000000
VERSION     DATIML010001212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4296255"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..>2955
                     /gene="purL"
                     /locus_tag="VLJ38_20935"
                     /gene_synonym="purI"
     CDS             41..>2955
                     /gene="purL"
                     /locus_tag="VLJ38_20935"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF003672.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HSU42064.1"
                     /translation="MTETVLERFEDAARLFRREKPRKLERIPVLDDGRDALVRANVKL
                     GLALDPEEIDYLVASFSALRRDPTDVELMMFAQANSEHCRHKIFRADFVVDGEAQPRS
                     LFGMIQNTHERSPAGTLSAYKDNAAVVRGHVAQRFFPDPASGRYTAIEEETAFVAKCE
                     THNHPTAISPRPGASTGSGGEIRDEGATGRGAKPKAGVTGFTVSHLRIPGFVQPWETP
                     GVGKPDRIVSALDIMLEGPLGGAAFNNEFGRPGVMGYFRTFEQQVETSSGKEWRGYHK
                     PILLAGGIGNVRPMHVEKRRFGPDTVVVVLGGPALLIGLGGGAASSMTAGASSADLDF
                     ASVQRDNPEMQRRCQEVIDRCSALGEATPILSIHDVGAGGLSNAIPELLNDAGCGGRL
                     ELRDIPNAEHGMSPLEIWCNEAQERYVLAVAPERLDVLRELCERERCPYGVLGRATDD
                     GTLVVTDRELGDTPIELPLSLLFGNAPKLTRRVSHRSVTTAPFDASRVNVSEAALRVL
                     RLPCVAAKDFLVTIGDRTVGGLIARDAMVGRYQVPVADSAVTLAGFHGYAGEAIALGE
                     RSPVAVLDPAASARLAVGEALLNLVSAPVAALADVKLSANWMAAAGHPGEDAALFDAV
                     HAVGMELCPALGVAIPVGKDSLSMRVVWDEGKRSITSPVSLVVTAFSRVADVRQALTP
                     ALVLEQGETELVLVDLGAGRGRLGGAAVAQVYGALGSEAPDVDDPATLRGLFEGVCEL
                     RAGGLLLAYHDRSDGGLFVTLAEMAFASGTGVRVRLDGTAPSVLSALFNEELGAVLQV
                     RRADTERVLAVLERHGLKRGRGGELSVLGAPATDGRVSFEYGGELVFSEELKALRLAW
                     SETSYRMQALRDNSGCAREAYAALAEPAALALSPALRFDLDADPARAVVSSASERPRI
                     AILREQGVNGQIEMAAAFTAAGFEAVDVHMSDLLGERVSLERYRGLVACGGFSYGDVL
                     "
BASE COUNT          426 a         1036 c         1037 g          456 t
ORIGIN      
        1 ggcggacctc gcccgcgtcc ggccgttgct ccacgatcgc atgaccgaaa cggtgctcga
       61 gcgtttcgag gacgccgcgc gcttatttcg gcgcgagaag ccgcgtaagc tcgagcgcat
      121 tcccgtgctc gacgacggcc gcgacgccct ggtgcgcgcg aacgtcaagc tcggcctcgc
      181 gctcgatccg gaagaaatcg actacctcgt cgcgagcttc tcggcgctcc gccgcgatcc
      241 cacggacgtg gagctgatga tgttcgcgca agcgaacagc gagcactgcc gccacaagat
      301 cttcagggcc gacttcgtcg tcgatggcga ggcgcagccg cgctcgctct tcggcatgat
      361 ccaaaacaca cacgagcgtt cgcccgcggg cacgctgtcc gcctacaagg acaacgcggc
      421 cgtcgtgcgc gggcacgtcg cgcagcgctt ctttcccgac ccggcgagcg gccgctacac
      481 ggctatcgaa gaagaaacgg cgttcgtcgc caagtgcgag acgcacaacc atccgaccgc
      541 gatatccccg cgcccgggcg cgtccaccgg cagcggcggc gagatccgcg acgaaggcgc
      601 gacgggccgc ggcgccaagc cgaaggcagg tgtcacgggt ttcaccgtgt cgcacctgcg
      661 catcccgggc ttcgtgcagc cgtgggaaac acccggcgtc ggcaagcccg accgcatcgt
      721 ctcggcgctc gacatcatgc tcgaggggcc gctcggcggc gcggcgttca acaacgagtt
      781 cggccgcccg ggcgtgatgg gctacttccg cacgttcgag cagcaggtcg agacgtcctc
      841 cggcaaggag tggcgcggct accacaagcc gatcttgctc gcgggcggca tcggcaacgt
      901 gcggccgatg cacgtcgaga agcgacgctt cggtcccgac accgtcgtcg tggtgctcgg
      961 cggacccgcg ctgctcatcg ggctcggcgg cggcgcggcc tcgtcgatga cggcgggcgc
     1021 gagcagcgcg gatttggatt ttgcgagcgt gcagcgtgat aacccggaga tgcagcggcg
     1081 ttgtcaggaa gtgatcgacc gctgctcggc gctcggggaa gcgacgccca tcctctcgat
     1141 ccacgacgtg ggggcagggg ggctctcgaa cgcgatcccc gagctcttga acgacgcggg
     1201 ctgcggcggc cgcctcgagc tgcgcgacat ccccaacgcc gagcacggca tgagcccgct
     1261 cgaaatctgg tgcaacgaag cgcaggagcg gtacgtgctc gccgtcgcgc ccgagcggct
     1321 cgacgtgctg cgcgagcttt gcgagcgcga gcgctgcccg tacggcgtac tcgggcgcgc
     1381 gaccgacgac ggcaccctcg tcgtcaccga tcgcgagctc ggcgatacgc ccatcgagct
     1441 cccgctgtcg ctgctcttcg gcaacgcacc gaagctcacg cgcagggtat ctcaccgctc
     1501 ggtgaccacg gcgccgttcg acgcgagtcg cgtcaacgtg agcgaagccg cgctgcgcgt
     1561 gctccggctc ccttgcgtgg cagccaagga ttttttggtg acgatcggcg atcgcaccgt
     1621 gggcggactc atcgcgcgtg acgccatggt cggccgctat caggtgccgg tcgccgacag
     1681 cgccgtcacg ctcgcggggt ttcacggcta cgcgggcgag gccatcgccc tcggcgaacg
     1741 aagtcccgtg gccgtactcg atccggcggc ttcggcgcgg ctcgcagtgg gtgaggcgct
     1801 gctcaacctg gtttcggctc cggtcgcggc gctcgcggac gtgaagctct ccgccaactg
     1861 gatggcggcg gcgggccacc ccggcgagga cgccgcgctg ttcgacgcgg tgcacgccgt
     1921 cggcatggag ctctgccccg cgctcggcgt cgccatcccc gtcggcaagg actcgctcag
     1981 catgcgcgtg gtctgggacg agggaaagcg ctcgatcacc tcgcccgtct cgctcgtcgt
     2041 cacggcgttt tcgcgcgtcg ccgacgtgcg gcaagcgctc acgcccgcgc tcgtgctcga
     2101 gcagggcgaa acggagctcg tgctcgtgga tctcggcgcg ggacgcggac gtctcggcgg
     2161 cgcggccgtg gcgcaagtgt acggtgcgct cggcagcgaa gcgcccgacg tggacgaccc
     2221 cgcgacgctg cgcggcttat tcgagggagt gtgcgagctg cgcgccggcg ggctcttgct
     2281 cgcttatcac gatcgctcgg acggtgggct cttcgtcacg ctcgcggaga tggcgttcgc
     2341 gtcggggacg ggcgtccgcg tgcgcctcga cggtacggcg ccgagcgtgc tttcggcgct
     2401 gttcaacgaa gagctcggcg ccgtcctgca ggtgcgccgc gcggacaccg agcgcgtact
     2461 cgcggtgctc gaacgtcatg gcctcaagcg cggccgaggc ggcgagctct ccgtgctcgg
     2521 cgcgcccgcg accgacgggc gcgtcagctt cgagtacggc ggtgagctcg tcttcagcga
     2581 agagctcaaa gcgctgcgcc tggcttggtc ggagacgagc taccgaatgc aagcgctccg
     2641 cgacaactcc ggctgcgcgc gcgaagcgta cgcagcgctc gccgagccgg cggcgctcgc
     2701 gctctcgcct gcgctgcgct tcgacctcga cgccgatccg gcgcgcgccg tcgtctcctc
     2761 cgcgagcgag cggccgcgca tcgcgattct gcgcgagcag ggtgtcaacg gccaaatcga
     2821 aatggccgcc gctttcaccg cggccggctt cgaagccgtc gacgtgcaca tgagcgatct
     2881 cttgggcgaa cgcgtatcgc tcgagcgtta ccgcggtctc gtcgcgtgcg gcggcttctc
     2941 ctacggtgac gtgct
//
LOCUS       DATIML010001213         2858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2272924, whole genome shotgun sequence.
ACCESSION   DATIML010001213 DATIML010000000
VERSION     DATIML010001213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2272924"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VLJ38_20940"
     CDS             complement(<1..313)
                     /locus_tag="VLJ38_20940"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HSU42065.1"
                     /translation="MRLFGHPLHPMLVAFPLALLGLAPVCDVVACLGMGVRLAVVAHY
                     LELSGLVGGVLAAVTGFADFYALDSPNPRLTKVALTHAGLALVTLSFFGLAFALRPTP
                     GV"
     gene            complement(332..673)
                     /locus_tag="VLJ38_20945"
     CDS             complement(332..673)
                     /locus_tag="VLJ38_20945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42066.1"
                     /translation="MTLPLLLFALAAVVGIGMAAIRFRGKPYPSMSLALLHGAAAAAG
                     LIALIVVVQKPGASLAMSAVIVFLVAAAGGFVLFFRHLRKLALPIWLVVVHALVAVAA
                     FVTLLVSVTRA"
     gene            complement(784..1203)
                     /locus_tag="VLJ38_20950"
     CDS             complement(784..1203)
                     /locus_tag="VLJ38_20950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42067.1"
                     /translation="MRFFSPFRLATYLLVLFFMGHTGGGMLAQKSLGPGADAVFDAMK
                     SVHFVFNGADSTWYGFWFGFGIMVSAYIVFSAVVAWQLDKVPREHWPDVSAIAWALAA
                     TQFAGALLSFKYFFLGPALLGLAVTALVTLGILRKRA"
     gene            1367..2614
                     /locus_tag="VLJ38_20955"
     CDS             1367..2614
                     /locus_tag="VLJ38_20955"
                     /inference="COORDINATES: protein motif:HMM:NF019285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HSU42068.1"
                     /translation="MPERLVSVIGALAMLALAFALCPAERRRHVNRRTVLMGVAVLVG
                     MALLVLRTPVRALFSLANTAVERLLGYSHEGAVFVFGKLADAQSFGFVFAVQVLPTIL
                     FFSALMSILYHYGVMPFVIERLGRALARSLAVSGAESFSTVADVFVGQTEAPLAIRPY
                     LATMTLSELNACMVAGFATTAGGVLAAYVAMLGAAVPGIAGHLIACSVMSAPASLVVA
                     KLMLPEVEATQTSGELRVDIPKTTANVLDAIAAGATDGLKLAVNVGGMLLVFLALTAL
                     ANAVFGWLGAHLLGTELTLERLFGWVFSPLAWLLGVPAADVTKIGSLLGQKTVLNEFV
                     AYSHLSEMLAKDPAWLSERGRLITTYALCGFANFGSIGVQIGGYSSLAPERRGDLSRL
                     AFRAMLGGMLATNLVACVAGALL"
BASE COUNT          525 a          904 c          966 g          463 t
ORIGIN      
        1 tgacaccggg ggtcggccgc aacgcgaagg ccagcccgaa aaacgacaga gtcacgagcg
       61 cgagccccgc gtgggtgagc gcgactttcg tgagtctcgg attcggcgaa tcgagcgcgt
      121 agaagtcggc aaagcctgtc acggcagcga gcacgccgcc gacgagtccc gaaagctcga
      181 gatagtgcgc gaccacggcg aggcggaccc ccatgccgag gcaggcgacg acgtcgcaca
      241 ccggagcgag gccgagcaat gcgagcggga acgccaccag catcgggtgc agaggatggc
      301 cgaaaaggcg catgcggttg ctcgcgcgag ctcacgctcg cgtgacgctc acgagcaggg
      361 tcacgaaagc cgccaccgcc acgagcgcgt gcacgaccac gagccagatc ggcagcgcca
      421 acttgcgtaa atgccggaag aagagcacga agccacccgc ggccgcgacg agaaacacga
      481 tgaccgcgct catggcgagc gaggcgcccg gtttctgaac cactacgatt agcgcgatga
      541 gccccgcggc tgctgccgcg ccgtgcagga gcgccaagct catcgaggga tacggctttc
      601 cgcgaaaccg gatcgcggcc ataccaatgc cgacgacagc ggcgagagcg aacagcagta
      661 gggggagcgt catgacgaat ggagtcggac gccgtcagaa aggttccgca ggtcgcggga
      721 tgcagggttc gttcgctgcc ggagttgcca ttcgccacgc acgtcgctac gcgaagcgcc
      781 gagtcaggct cgtttgcgca ggatgccgag cgtgacgagc gccgtgacgg cgagtccgag
      841 cagcgccggg ccgagaaaaa agtacttgaa cgagagcagc gcgccggcaa actgcgtcgc
      901 cgccagcgcc caggcgatgg ctgagacatc gggccagtgt tcgcgcggaa ctttatcgag
      961 ctgccaggcg acgacggccg agaagacgat gtacgccgaa accatgatcc cgaacccgaa
     1021 ccagaagccg taccaggtcg agtccgcgcc gttgaacacg aaatgcaccg acttcatggc
     1081 gtcgaacacc gcgtcggcac cgggtccgag gctcttttgc gcgagcatgc cgccgccggt
     1141 gtgccccata aagaaaagca cgagcagata ggtcgcgagg cggaaggggc tgaagaacct
     1201 catcgcgcgc tcctccgcga acctcgcgtg agcaatgatt caccgatggc gtaaaactcc
     1261 ggaataagcg ccgaaaaatt ccaatacgag ggggccgaat aggtgaccat gtggttacct
     1321 atgaccgatc ggcgcgagtc cgtcaagagc gtatgctcgg cgtcgaatgc cggaacggct
     1381 ggtgagtgtg atcggcgcgc ttgccatgct ggcgctcgcc ttcgcgctct gcccggctga
     1441 acgccgccgc catgtcaatc gacgcacggt gctgatgggc gtcgccgtgc tcgtcggaat
     1501 ggcgctgctc gtcttgcgga cgccggtgcg cgctttgttc tcgctcgcga acaccgccgt
     1561 cgaacgcctg ctcggctaca gccacgaggg cgcagtgttc gtgttcggca agctcgccga
     1621 cgcacagtcg ttcggcttcg tcttcgccgt gcaggtgctg ccgacgatct tgttcttttc
     1681 ggcgctgatg tcgattctct atcactatgg cgtgatgccg ttcgtgatcg agcggctggg
     1741 tcgcgcgctc gcgcgttcgc tcgccgtgag cggcgccgag agcttttcga cggtcgccga
     1801 cgtgttcgtc gggcagacgg aggcgccgct cgcgattcgg ccctacctcg cgacgatgac
     1861 gctgtcggag ctcaacgcct gcatggtggc cggctttgcc acgaccgcgg gcggcgtgct
     1921 tgcagcgtat gtcgcgatgc tcggcgccgc ggtgccgggc attgcggggc acctcatcgc
     1981 ctgcagcgtg atgagcgcgc cagcttcgct cgtcgtcgcg aagctgatgc tgccggaggt
     2041 cgaagcgacg caaacgagcg gcgagctacg cgtggacatc cccaagacga cggctaacgt
     2101 gctcgatgcc atcgccgccg gagcgacgga cggcctcaag ctcgccgtga atgtgggcgg
     2161 catgctgctc gtcttcttgg cgctgacggc gctcgcgaac gccgtgttcg gctggctcgg
     2221 cgcgcacctc ctcggcacgg agctcacgct cgaacgactc ttcggctggg tgttctcgcc
     2281 gctcgcctgg ctgctcggcg tgccggcggc cgacgtcacg aaaatcggca gcctgctcgg
     2341 ccaaaaaacg gtgctgaacg agttcgtcgc ctactcgcac ctgagcgaga tgctcgcgaa
     2401 ggaccccgcg tggctcagtg agcgcggccg cttgatcacg acgtacgcgc tctgcggctt
     2461 cgcgaatttc ggcagtatcg gcgtgcaaat cggcggctac tcgagcctcg ctcccgaacg
     2521 gcgtggcgat ctgtcgcggc tcgcctttcg cgcgatgctc ggcgggatgt tggcgacgaa
     2581 cctggtcgcg tgcgtcgcgg gggcgctctt gtgagcgccg gccctgacag tcgcgggcaa
     2641 gttgctgtaa actttcgcta attcgcgacg tgtcgcgggt ctgcaaaaaa aaacgcaacg
     2701 ctgtcgatcc gggctgcctc tcgttcgttc gggggtcgaa gctgccgaag gccggcggcg
     2761 actcagccaa ggagaaacct catgaaccaa tatctcttgt ccgtgcacat ggtcgaaggc
     2821 gccgctcctc cgagtccgga ggtgatgcag aagatgta
//
LOCUS       DATIML010001214         4895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4583965, whole genome shotgun sequence.
ACCESSION   DATIML010001214 DATIML010000000
VERSION     DATIML010001214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4895
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4583965"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VLJ38_20960"
     CDS             complement(<1..489)
                     /locus_tag="VLJ38_20960"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HSU42069.1"
                     /translation="MGSLAAVAVVGSWPSEALAANQEPAGLNLGLTSFYDGFGRNEEG
                     FVYLAYATYSRSRSINGDDGKPEEVFNNPKLDAYVLINQLAYVLPETLFGDAAHPGIM
                     LLVPVIGFDTSFSPPPPPPGIQLKDNGFGMGDPVLGVFLQFKPIMADKRPVFSHRLEL
                     DLI"
     gene            937..2769
                     /locus_tag="VLJ38_20965"
     CDS             937..2769
                     /locus_tag="VLJ38_20965"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="feruloyl-CoA synthase"
                     /protein_id="HSU42070.1"
                     /translation="MTRRADGVVLLRSRHALRSYARCTGEYLLQWASRAPTRRLLMER
                     DHDGGWRGITYADALEQVNRIGAWLLEQKLSAERPVLVLSGNSVEHGLLMLACLHVGI
                     PVAPVSPAYALVSKDFGKLIKIVGTLRPGLIYAADQTRFGPALAAIRRSHRATVVVSS
                     EATPTDGAVPFAALTSKHDTRAAERAFAAVSHDTIAKFLFTSGSTDEPKAVINTQRML
                     CANQQAIAELWRFLDEPPVLVDWLPWHHTFGGNHNFNLTLRNGGTLYIDAGRPVAGEF
                     ETTLANLREIAPSVIFNVPRAYDLLATALRGDSALRKRFFSRLRLLFYAAAGLPQNVW
                     DSLRALAYETLGHELPMVSSWGLTETAPAATSCHFQAERAGVVGLPIPGCELKLVPSG
                     DKLEARVRGPNVTPGYWGRPDLTAAAFDEEGFFKTADAMRFIDPARPDAGLLFDGRLG
                     EDFKLTTGTWVHVGALRLKAIAALAPIAQDIVVTGHDRHEIGFLIFPNLDACRKLCAA
                     QGDSGVVALLQHSAVRGAIAAGLLALSQSGAGSSTYATRALMLEEPPSLDAGEITDKA
                     YVNQRAVLTRRAALVDELYRTPLQASVIIPSSSAVAGVVAGRSA"
     gene            2801..4057
                     /locus_tag="VLJ38_20970"
     CDS             2801..4057
                     /locus_tag="VLJ38_20970"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HSU42071.1"
                     /translation="MNETFEPRAQTANYEDVWLVAGVRTPFADYMSVLSGVSATDLGI
                     HVARALFEQSGVPASDVDSVVAGNVAQSSFDAFYLPRHIGLYSGVPLGVPALLVHRLC
                     GTGFETILTAADQIALGKAKLVLCVGTESMSRNPVAAYSHRSGFRMGQVEFKDFLWEA
                     TLDTASNTRMGETAENLARRYGITRPEVDRFAEQSFERALEGWNSGFLAGEVAAVTPQ
                     SFNLEGYQARGIKLPRNVARFERDEHVKASTFEVLQGLRPAFGKDGVQTGGNSSAIVD
                     GAAGVLVASGSYVRAHGLRPLARVVAGASVGVPPEIMGIGPVPAIRAVLGAARLQQRE
                     VARFEINEAFGAQYLAVEKELELERSRVNVHGGAIAIGHPLAASGVRLTTTVARELEQ
                     AKGEFAISSACAGGGQGIAVLLRRAA"
     gene            4103..4870
                     /locus_tag="VLJ38_20975"
     CDS             4103..4870
                     /locus_tag="VLJ38_20975"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HSU42072.1"
                     /translation="MDLNGSIFIVTGGSSGLGAATVRRFQARGARVVVADVDAEGGQK
                     LAAELGRGVSFCRTDVTNEAEAQAAIDSAVREFGGLNGLVNCAGIGPAERVVGKKGTH
                     RLDSFARVIGVNLIGAFNMIRLAAAVMVTGNANAAGERGVIVNTASVAVWDGQIGQAA
                     YAASKGGIVAMTLPIARELASSGVRVCTIAPGIFATPMLAGLPSEVQDALGRSVPFPQ
                     RLGRPDEYAALAEHVVENEMLNGETIRLDGALRMAPR"
BASE COUNT          827 a         1634 c         1625 g          809 t
ORIGIN      
        1 gatgagatcg agctcgagcc ggtgcgagaa cacgggtcgc ttgtcggcca tgatcggctt
       61 gaactgcaga aacacgccga gcaccgggtc ccccatgccg aagccgttgt ccttcagctg
      121 tatcccgggc ggcggcggcg gcgggctgaa gctcgtgtcg aagccgatga cgggaacgag
      181 cagcatgatg cccggatgcg cggcgtcgcc aaagagggtt tcgggcagca cgtaggcgag
      241 ctgattgatg aggacgtagg cgtcgagctt cgggttgttg aagacctctt ccggcttgcc
      301 gtcgtcgcca ttgatgctgc gcgacctcga gtaggtagcg taggcgaggt aaacgaaccc
      361 ctcctcgttc ctgccgaatc cgtcatagaa actcgtgagt ccgaggttca ggcccgcggg
      421 ctcctgattc gcggcgagcg cctcactcgg ccaagagccg accacggcaa ccgcggccag
      481 cgaacccaag gcaatccgtc caaatcgacc catctgacat gctcctcaac catcggcgca
      541 gaacgacctc tgcacgcgaa agtccggaaa ttcgcggcgg gcaagcagcg cccgctcgtc
      601 atgacctcat tcgagcaaac gaatcccgca gtcacgggga gagcgggaca ggacgcaact
      661 actatagtac gcttgcgtca agtctcctat attaaatcct gacttcgaga tacctggccg
      721 caacagaaca tccagagcgc aaaagtccga ttcgggcggc ctgccgctcg gaacgtcgac
      781 tccgcgcggt cagcgggggt ggacagccca cagatactat agtagatcct gggtgccgcc
      841 gctggcctcc gccggcctga gcatcggcac ccgctctgca tgatggcgca ttccgaatcc
      901 gagtcgtcgc gtctcttcgc gccagcggcc gtcgagatga cgcgtcgcgc tgacggcgtg
      961 gtgctgttgc gctcgcgtca tgcgctccgc agctacgcgc gttgtacggg cgaatacctc
     1021 ttacagtggg caagccgcgc gcccacccgg cgcctgctca tggagcgcga ccatgacggc
     1081 ggctggcgcg gtatcaccta cgcggacgcg ctcgagcagg tcaatcgcat cggggcgtgg
     1141 ttactcgagc agaagctctc ggcggagcgt cccgtgctgg tcctctcggg caacagcgtc
     1201 gagcacggcc tgctgatgct cgcctgcctg cacgtcggaa tccccgtcgc gccggtctct
     1261 cccgcctacg ctctagtgtc gaaggatttc ggcaagctca tcaaaatcgt cggcacgcta
     1321 cggcccggtc tcatctacgc ggctgaccag acgcgcttcg gccccgcgct ggcagcgatc
     1381 cgccgcagcc accgggcgac tgtcgtcgtg agcagcgagg cgacgccgac agacggagcc
     1441 gtgccgttcg cggcgctcac gtccaagcac gacacgcggg cggcggagcg ggcattcgct
     1501 gcggtctcgc acgacaccat cgccaagttc ctgttcacct cgggctcgac cgacgaaccc
     1561 aaggcagtga tcaacaccca acggatgctc tgcgccaatc agcaggccat cgcagagctc
     1621 tggcggtttc tcgacgagcc gcccgtgctg gtcgattggc tgccttggca tcacacgttc
     1681 ggcggcaacc acaacttcaa tttgacgctg cgcaacggcg gcaccctgta catcgacgcg
     1741 ggccgtcccg tggcgggcga gttcgagacg acgctcgcga atctgcgcga aatcgcgcca
     1801 agcgtcatct tcaacgtgcc gcgcgcctac gacctgctcg cgaccgcgtt gcgcggcgac
     1861 tcggcgctcc gcaaacgctt cttcagccgg ctacgtctgc tcttctatgc tgcggccggt
     1921 ctgccgcaga acgtatggga ttcgctgcga gcactcgcgt acgagacgct cggccacgaa
     1981 ttgccgatgg tctcctcctg ggggctgacg gagacggcgc ccgccgcgac gagctgccat
     2041 tttcaggcag aacgcgccgg agtcgtcggc ctgccgatcc ccggctgcga gctcaagctg
     2101 gtcccgagcg gcgataagct cgaggcgaga gtgcggggac cgaacgtcac gcctggctat
     2161 tggggtcgcc ccgatctgac ggccgcagcc ttcgacgaag aaggcttttt caagacggcg
     2221 gacgcgatgc gcttcatcga ccctgcgcgg ccggacgcag gcttgctctt cgacggtcgc
     2281 ctgggcgagg acttcaaact gacgacgggc acatgggttc acgtcggagc tcttcggctc
     2341 aaagccattg ccgccctcgc gccgatcgcc caggacatcg tggtcaccgg gcacgatcgc
     2401 cacgagatcg gatttttgat ttttccgaac ctcgacgcgt gccgaaagct gtgcgctgcg
     2461 cagggcgact cgggcgtggt cgcgttgctc cagcactcgg ccgtgcgtgg cgcgatcgcc
     2521 gctgggctcc tcgcgctctc gcagtcgggc gcgggctcgt cgacctacgc gacgcgcgcg
     2581 ctcatgctgg aggagccgcc gtccctcgac gcgggcgaaa tcacggacaa ggcctacgtc
     2641 aatcagcgcg ccgtgttgac ccgccgagcg gcattggtcg acgagctcta ccgcacgccg
     2701 ctccaggcgt cggtgattat tccctcgagc tccgcggtgg ccggagtagt ggcgggacgg
     2761 agcgcgtgac cggcttttcg actccatcac ggtgactgcc atgaacgaaa cattcgaacc
     2821 ccgcgcgcag actgccaact acgaggacgt ttggctcgtc gccggcgtgc gcacgccgtt
     2881 cgccgactac atgagcgtgc tgagcggcgt gtcggcgacc gatctcggga tccacgtcgc
     2941 gcgcgcgttg ttcgagcaga gcggcgtgcc ggcgtcggac gtggacagcg tcgtcgcggg
     3001 caacgtggct cagtcgagct tcgacgcgtt ctacttgccg cggcatatcg ggctctactc
     3061 cggcgttccg ctcggcgtcc ccgcgctcct cgtgcaccgc ctgtgcggaa cgggcttcga
     3121 gaccatcctg acggcggccg accagatcgc cctcggcaag gccaagctcg tgctctgcgt
     3181 gggcaccgaa tcgatgtcgc gaaacccggt cgccgcctat tcgcaccgga gcggtttcag
     3241 aatgggccaa gtcgagttca aggatttctt gtgggaagcg acgctcgaca cggcctcgaa
     3301 cacacgcatg ggtgaaaccg ccgaaaatct ggcgcggcgc tacgggatca cacgacccga
     3361 ggtcgatcgc ttcgcggagc agagcttcga gcgcgcgctc gagggctgga acagcggctt
     3421 tctcgcggga gaagtcgcag cggtcacgcc ccagagcttt aacctcgagg gctatcaagc
     3481 gcgcggcatc aagctgccgc gcaacgtggc gcgcttcgag cgcgacgagc acgtcaaagc
     3541 gagcacgttc gaggtgctgc aagggctacg gcccgccttc ggtaaggacg gcgtgcagac
     3601 gggcggcaac agctccgcca tcgtcgacgg cgcggcgggc gtgctggtcg cgtcgggcag
     3661 ctacgtcagg gctcacggcc tgcgtccact cgcgcgcgtc gtcgcaggcg cgagcgtcgg
     3721 cgtaccgccg gagatcatgg gcatcgggcc cgtgcctgcg attcgtgccg tactcggggc
     3781 cgcgcgcctt cagcaacggg aggtcgcgcg cttcgagatc aacgaggcct tcggcgcgca
     3841 gtacctcgcc gtcgaaaaag agctcgagct cgagcgctcc cgcgtcaacg tgcacggcgg
     3901 cgccatcgcc atcggccatc cgctcgccgc ttccggcgtg cgtttgacga cgaccgtcgc
     3961 gcgcgagctc gagcaagcga aaggcgagtt cgcgatttca tcggcgtgcg ccgggggcgg
     4021 gcagggcatc gccgtcttgc tgcgtcgcgc cgcgtgacgc ccggcgtcga cctccgacca
     4081 agcatccaca cgagaaccca gcatggatct aaacggctcg attttcatcg tcacgggcgg
     4141 tagctcggga ctcggcgcgg cgaccgtcag gcgctttcaa gcccgcggtg cgcgcgtcgt
     4201 cgtcgccgac gtcgacgccg aaggcggcca gaagctcgcg gcagagctcg gccgtggcgt
     4261 gagcttctgc cgtacggacg taacgaacga agccgaagcg caggccgcga tcgacagcgc
     4321 ggtccgcgag tttggcggct tgaacggcct cgtcaactgc gcggggatcg gtccggccga
     4381 acgcgtggtg ggcaagaagg gcacgcaccg cctggactcc ttcgcgcgcg tcatcggcgt
     4441 caacttgatc ggcgccttca acatgatccg gctcgccgcc gcggtgatgg tgacgggtaa
     4501 cgccaacgcc gcgggtgagc gtggcgtcat cgtcaacacc gcgtcggtcg ccgtgtggga
     4561 cggacagatc ggacaagcgg cttacgctgc ctcgaagggc ggaatcgtcg cgatgaccct
     4621 gccgatcgcg cgcgagctcg cgagcagcgg cgttcgcgtt tgcacgatcg ctccgggcat
     4681 cttcgcgacg ccgatgctcg ccgggctgcc gagtgaagtg caggacgcgc tcggcaggag
     4741 cgtgccgttc ccgcagcgtt tggggcgacc cgacgaatac gcggcgctcg cggaacacgt
     4801 cgtcgaaaac gagatgttga acggcgagac gattcgcctg gatggtgctt tgcggatggc
     4861 cccgcgctga acatacttgc ccgatgaagc caccc
//
LOCUS       DATIML010001215         2269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2852194, whole genome shotgun sequence.
ACCESSION   DATIML010001215 DATIML010000000
VERSION     DATIML010001215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2852194"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VLJ38_20980"
     CDS             complement(<1..596)
                     /locus_tag="VLJ38_20980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HSU42073.1"
                     /translation="MSIIAPVQGDEHRPIRDLDELSEVFRAAEKPREQFRIGAEAEKF
                     AVVERTGVPLDYEHGVKRVFGALAASGWLPERESHDGPVIAMRRASASVTLEPGAQLE
                     LSGSALVDLHAVASELDSHYAELRPVSDELGLVWLSVGFHPLAYQAELPWVPKARYGV
                     MKEYLPTRGYAAHDMMRRTATVQANFDFSSEEDAIRKLV"
     gene            complement(605..1546)
                     /locus_tag="VLJ38_20985"
     CDS             complement(605..1546)
                     /locus_tag="VLJ38_20985"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HSU42074.1"
                     /translation="MSFTHVQARLLAGRPLVVAVDSNASLRARGVALDVPGALGQLLR
                     ECPEDVREHYRVEVECRADVLAALTGDTTPRALAEVGMEHRAAQLTSRAVELALEAAE
                     ESAKPVAVAGMLGSDMVSPVAAVRLHEELAEHSARLYAAGCELLIARGQGSRVNLMGA
                     VVAAARTELPTWAVVERMGEPAQSSDPELFRALRAAGASAVLFEVSSVARGVRELTET
                     REALADVGLPVGILLAASELSLPGFPDTDSAPERWADHALDLDGAGARVIGGGAGTTE
                     SHLRALARALGSLHPSLPPQRSDTAANDASERSPRNS"
     gene            1713..2105
                     /locus_tag="VLJ38_20990"
     CDS             1713..2105
                     /locus_tag="VLJ38_20990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42075.1"
                     /translation="MHANLRQLFVLGLLVVGTTHCSSSSDAVQTAPAGAGKAGGGRPG
                     TGGSATGGSSGSSAGAAAGHVGTAGTGAGAGGTAGGNAAGMGAAGEPNTGSGGAPAAG
                     ASSGGAAHAGAGGAPASGGAATAGSAAG"
BASE COUNT          354 a          760 c          825 g          330 t
ORIGIN      
        1 acgagctttc tgatggcatc ttcttcactc gaaaagtcga agttggcctg gaccgtcgcg
       61 gtgcggcgca tcatgtcgtg cgccgcgtag cctcgcgtcg gtaggtattc cttcatcacg
      121 ccgtagcgcg ccttgggcac ccacggcagc tcggcttggt acgcgagcgg gtgaaaaccg
      181 acgctcagcc agacgaggcc gagctcgtcg gaaacgggcc ggagctcggc gtagtgcgag
      241 tcgagctcgc tcgcgacggc gtggagatcg acgagcgcac tgccgctgag ctcgagctgg
      301 gctccaggct cgagcgtgac ggaagccgaa gcacgccgca tggcgatcac gggaccgtcg
      361 tggctctcgc gctcgggcag ccagccgctc gccgcgagcg cgccgaacac gcgcttgacg
      421 ccgtgctcgt agtcgagcgg cacgccggtg cgctcgacga cggcaaactt ctccgcctcg
      481 gctccgatgc ggaactgttc gcgcggcttc tcggcggcgc gaaacacttc gctgagctcg
      541 tcgaggtcgc ggatcgggcg gtgctcgtcg ccttggacgg gagcgatgat ggacacggaa
      601 agcctcagga gtttcgggga gaacgctcgg aagcgtcgtt ggcggcagtg tcggaacgtt
      661 gcgggggcag cgacggatgg agcgagccga gcgcccgggc gagcgcacgc aaatggcttt
      721 cggtcgtgcc ggcgccgcct ccgatgacgc gcgcgccggc tccgtcgagg tcgagcgcgt
      781 ggtcggccca gcgctcgggg gcgctgtccg tgtccgggaa accaggcaag gagagttcgc
      841 tggcggctag caaaatacca actgggagcc ctacgtcggc gagggcctct cgggtttcag
      901 tgagttcgcg tacgccgcga gcgacgctcg aaacctcgaa caggacggcg ctcgcgcccg
      961 cagcgcgcag agcccgaaaa agctcgggat cggagctctg cgccggctca cccatgcgct
     1021 cgaccacggc ccaggtcggc agctccgtgc gggccgccgc gaccaccgcc cccatcaagt
     1081 tcacgcgtga gccctggcca cgggcaatga gcagctcaca acccgcggcg tagaggcgcg
     1141 cggagtgctc ggcgagttct tcgtgcaaac ggacggccgc gacggggctc accatgtccg
     1201 agccgagcat gccggcaacg gctacgggct tcgcgctttc ctcggccgct tcgagcgcga
     1261 gctcgacggc gcgtgaagtg agttgcgccg cgcggtgttc catccccacc tcggcgagcg
     1321 cgcgtggggt cgtgtcaccc gtgagggcgg cgagcacgtc ggcgcggcat tcgacttcga
     1381 cgcggtagtg ctcgcgcaca tcttccgggc attcgcggag cagctgaccg agagcgcccg
     1441 ggacgtccaa agcgaccccg cgcgctcgca ggcttgcgtt gctgtcgacc gcaaccacga
     1501 gcggccggcc ggctaaaagc cgcgcctgaa cgtgagtaaa actcatcgcc gacgagccta
     1561 caccgcagcc cggctaccgt gacggaacaa gagaagcccc ggcggagccg gcgcgctgag
     1621 gctcgggttc cgtcgcgaac ccggtgcgcg aagctaatga aaggtgcgca acgccggccg
     1681 ctcagctacg ctgcggcgcc tcggagttca ccatgcacgc caacctgcgc cagctcttcg
     1741 ttctcggcct tcttgtcgtc ggcacgaccc attgctcctc gagctcggac gccgtgcaga
     1801 cggcacctgc cggcgccggt aaggccggcg gcgggcgtcc cggcacgggc ggctccgcaa
     1861 ccggcgggtc gagcggtagc tctgccggcg cggcggcggg acatgttggc acggcgggaa
     1921 ccggtgccgg agccggcggg acggcgggcg gcaatgctgc tgggatgggc gcagctggtg
     1981 agccgaacac cgggagtggt ggcgctccgg cggccggcgc gagcagcggt ggcgcggctc
     2041 acgctggcgc gggtggtgct cccgcgagcg gtggggcagc gaccgccggc agcgcagcgg
     2101 gctgattact tctcgtaagc ttgtgcggcg acgagaccgc tgccgcccat cacctgcacg
     2161 acgatttttc ccgaagcggg gatgacgccg aacgaccagc gatagcaggc gctcttttta
     2221 ccgagcacgg ccgtcgctcc cgtgtcctgg tccacggcga gtacagggg
//
LOCUS       DATIML010001216         3937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1121428, whole genome shotgun sequence.
ACCESSION   DATIML010001216 DATIML010000000
VERSION     DATIML010001216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121428"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VLJ38_20995"
     CDS             complement(<1..655)
                     /locus_tag="VLJ38_20995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42076.1"
                     /translation="MAARTRGTWGGRRPGAGRKPGPNPKTPHRALTTYTGKSPVLMTL
                     HASIDTLRSERAFDAILRAVAGTNAFAADQFRIVHFSVAPNRVYLIAEARNARSLSSG
                     ARSIAIRIARYVNDTLSRTGPLWADRWRRRDLKTPADVRRALVYVFGNFRAHVPHAAR
                     ASIDPYSSAAWFDGFRGYDSAKAAPPFAETRGVAVSFESSASPVLPPRSTLLAKDWRK
                     "
     gene            complement(723..1892)
                     /locus_tag="VLJ38_21000"
     CDS             complement(723..1892)
                     /locus_tag="VLJ38_21000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSU42077.1"
                     /translation="MIPLSYNVRSLLVRKTTTVATALGVGLVVFVLAAAFMLGTGITK
                     TMVGAGRRDNAIVLRKGSDTEMASSLEVNTLSMIAGAPGVKRSASGTSLVSGEVVLVI
                     AQEKLGTGGQVANVLVRGVPAVALEVRPEIHVVAGRPPRPGTDEVMIGQGLRGKYQGM
                     DLEQSFELKKNRPVKVVGVFESGGSSFESEVWADVDTARSSFGREGLVSSATVRLESP
                     SKFDAFKATMESEKRLGLETLTETGYYEKQSSMTSLFIKITGAIIVFFISLGAMVGAL
                     ITMQAAVSQRQREIGTLRALGFSRVSILTSFLLESTVLALGGGVLGVLAALCMTFVKL
                     SMMNFATWQEVSFSFDPNPQVLVVSLVFGALMGVIGGFFPALRAARVSPIEAMRD"
     gene            complement(1902..3035)
                     /locus_tag="VLJ38_21005"
     CDS             complement(1902..3035)
                     /locus_tag="VLJ38_21005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSU42078.1"
                     /translation="MQLATIAARNVWRNKARTLLTLAGVMIAVMTFLLLRTFIWSWSA
                     SAEQGARDRIGIRHKVSFIMQLPRRYVEEVRQIPGVKQVAHASWFGAKDPNHLDDFLK
                     VYDEIKVPPEQVQAWKQDREGAIVGDVLAKKKGWKIGQKIVLSGTIYPGDWEFHIAGI
                     YTADSPTVDRSSLWFQYKYLDESRPERTKDQVGWIMARVDDPGRAAEIARAVDKKFED
                     RDIQTISMSERALQASFLGMVSAILKLIGIVSIVMMAIMALILGNTIAMSVRERTHEY
                     GVLRAIGFLPSHIVRFILLEGLVLGALGGLAGLLFGYPLIQNGIGPALEQNLGAMFAV
                     FRVTPELAALSFVLALVLGTAAAIIPARTAARLEVVSALRRVG"
     gene            complement(3056..3760)
                     /locus_tag="VLJ38_21010"
     CDS             complement(3056..3760)
                     /locus_tag="VLJ38_21010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU42079.1"
                     /translation="MSDGESGTEGKGAIIRLEKVRKSFFRGKEQLDVLAGLDLTIKEG
                     SFEALMGPSGSGKSTLLNLIAGLDQPTSGKLVVAGSDIGSMSEGQRANWRAHNIGFVF
                     QTYNLMPVLTAVENVELPLLLAKLPASERRKRAEIALRAVGLEDRGGHLPSQLSGGQE
                     QRVTIARAIVTDPKIIVADEPTGDLDRTSADEILRLLEKLNTEFGKTIVMVTHDPAAA
                     ERAKIVHRLDKGVLAA"
BASE COUNT          666 a         1301 c         1312 g          658 t
ORIGIN      
        1 gtttccgcca atccttcgcg agcagggtgc tgcgcggagg caacacgggc gatgccgacg
       61 attcgaacga caccgcgacg ccgcgcgtct cggcgaacgg aggcgcagcc tttgccgaat
      121 cgtacccgcg aaacccgtcg aaccatgccg ccgaggagta agggtcgata ctcgcgcgcg
      181 ccgcgtgtgg gacgtgggcg cggaagttcc cgaacacgta aaccaaggcg cgtcgcacgt
      241 ctgcgggcgt cttcagatca cgccgccgcc agcggtcggc ccagagcgga ccggttcgcg
      301 acagggtgtc gttcacgtag cgcgcaatgc ggatggcgat gctgcgcgcg ccgctggaga
      361 gcgagcgggc attgcgcgcc tctgcgatga ggtaaacgcg attgggcgcg accgagaaat
      421 gcacgatgcg aaactggtcg gccgcgaagg cgttcgtgcc ggcgacggcg cggaggattg
      481 cgtcgaacgc gcgctcgctc cgcaaagtat cgatgctggc gtggagcgtc atgagcacgg
      541 ggcttttgcc cgtgtacgtc gtgagcgcgc gatgcggggt cttcggattc ggtccgggtt
      601 tgcgaccggc gccgggacgc cggccacccc aggttccgcg agtgcgagcg gccatcatga
      661 ttcggctata gtcacggcct gccgccgtca accacgcccg cgcggtcgag cgccgaagcc
      721 gttcaatccc gcatcgcttc gatgggcgaa acgcgagcgg cgcgcagggc ggggaagaag
      781 ccgccgatga cgcccattag cgcgccgaaa acgagcgaaa cgacgaggac ctgcgggttc
      841 gggtcgaacg agaagctgac ctcttgccag gtggcaaagt tcatcatcga gagcttcacg
      901 aacgtcatgc aaagcgcggc gagtacgccg agtacgccgc cgccgagcgc gagcaccgtg
      961 gactcgagta agaacgacgt gaggatcgag acgcgcgaga agccgagcgc gcgcagcgtg
     1021 ccgatctcgc gctggcgctg cgacacggcg gcctgcatcg tgatgagcgc accgaccatg
     1081 gcgccgagcg agatgaagaa gacgatgatg gcgcccgtga tcttgatgaa cagcgaggtc
     1141 atgctcgact gcttctcgta gtagccggtc tccgtcagcg tctcgaggcc gaggcgcttt
     1201 tcgctctcca tcgtcgcttt gaacgcatcg aatttgctcg gggactcgag ccgcaccgtc
     1261 gccgaagaca cgagtccttc acgcccgaac gaggagcgcg ccgtgtcgac gtcggcccac
     1321 acctcggact cgaagctcga gccgcccgac tcgaacaccc cgaccacctt gaccggccgg
     1381 ttcttcttga gctcgaagct ctgctcgagg tccatgcctt gatatttgcc gcgcaggccc
     1441 tggccgatca tcacttcgtc cgtgccggga cgcggcgggc ggcccgctac gacgtgaatt
     1501 tcgggccgca cctcgagcgc gacggcgggc acgccgcgca cgagcacgtt ggcgacctgg
     1561 ccgcccgtgc cgagcttctc ctgagcgatc acgagcacga cctcgcccga gacgagcgag
     1621 gtgcccgagg cggagcgctt cacgcccggc gcgcccgcga tcatgctgag cgtgttcacc
     1681 tccaggctgc tcgccatctc ggtgtccgag cccttgcgga gcacgatggc gttgtcgcgc
     1741 cgccccgcgc cgaccatcgt cttggtgatg cccgtcccga gcatgaacgc cgcggcgagc
     1801 acgaacacga cgagcccgac gccgagcgcc gtcgcgacgg tggtcgtctt gcgaaccagc
     1861 agactacgga cattgtagga aaggggaatc acgcgcttac ctcacccgac gcgccgtagc
     1921 gcggagacga cctcgagccg cgcggcggtg cgcgcaggaa tgatcgcggc ggccgtaccg
     1981 agcacgagcg ccagcacgaa ggagagcgcg gcgagctcgg gcgtcacgcg gaacaccgcg
     2041 aacatggcgc cgagattctg ctcgagcgcc gggccgatgc cgttttgaat cagtgggtag
     2101 ccgaagagca ggcccgcaag tccgccgagc gcgccgagca cgaggccctc gagcaggatg
     2161 aagcgcacga tgtgcgaggg caaaaagccg atcgcgcgca gcacgccgta ctcgtgggtg
     2221 cgctcgcgga cgctcatcgc gatcgtgttg cccaagatca gcgccatgat cgccatcatc
     2281 acgatgctga cgataccgat gagcttcagg atcgccgaca ccatcccgag gaacgacgcc
     2341 tgcaaggcgc gctcgctcat gctgatggtc tggatgtccc gatcctcgaa cttcttgtcg
     2401 acggcccgcg cgatctcggc cgcgcgcccc ggatcgtcga cgcgcgccat gatccaaccg
     2461 acctggtcct tcgtgcgctc cgggcgcgat tcgtccaagt acttgtactg aaaccagagc
     2521 gaggagcgat ccaccgtcgg gctgtcggcc gtgtagatgc cggcgatgtg aaactcccaa
     2581 tcgccgggat aaatcgtgcc ggagagcacg atcttttggc cgattttcca gcccttcttc
     2641 ttggcgagca cgtcgccgac gatcgcgccc tcgcggtctt gcttccaggc ttgcacctgc
     2701 tcgggcggca ccttgatttc gtcgtagacc ttcaagaagt cgtcgaggtg gttcggatcc
     2761 ttcgcgccga accagctcgc gtgggcgacc tgcttcacgc cggggatttg gcgcacctct
     2821 tccacgtagc ggcgcgggag ctgcatgatg aagctcacct tgtgccggat gccgatgcgg
     2881 tcgcgcgcgc cctgctcggc cgacgcgctc cacgaccaga tgaaggtgcg gagcaagagg
     2941 aaggtcatga ctgcgatcat gacgcccgcg agcgtcaaca gcgtgcgcgc cttgttgcgc
     3001 caaacgttgc gagcggcaat cgtcgcgagt tgcatggggg gttccgctgc gcggcctaag
     3061 ccgcgagcac gcccttgtcg aggcggtgca cgatcttggc gcgttcggcc gcggccggat
     3121 cgtgcgtcac catcacgatg gtcttgccga actcggtgtt gagcttttcg agcaggcgta
     3181 ggatttcgtc ggcgctcgtg cggtcgagat cgcccgttgg ctcgtcggcg acgatgatct
     3241 tcgggtcggt gacgatggcg cgcgcgatcg tcacgcgttg ctcctgaccg ccggagagtt
     3301 ggctcggcag gtgtccgccg cgatcctcga gcccgacggc acgcagcgcg atttcggcgc
     3361 gcttgcggcg ctcgctcgcg ggcagcttcg cgagcaggag cgggagctcc acgttctcca
     3421 ctgccgtgag caccggcatc aggttgtagg tttgaaacac gaagccgatg ttgtgggcgc
     3481 gccagttcgc gcgctggcct tcgctcatgc tgccgatatc cgacccggcc acgacgagct
     3541 tgcccgaggt cggctgatcg agcccggcga tcaaattcaa cagcgtcgat ttgccggagc
     3601 ccgacgggcc catcaaggcc tcgaacgagc cctcttttat cgtgagatcg agcccggcga
     3661 gcacgtcgag ctgctctttg ccgcggaaaa agctcttgcg cactttttcc aggcggatga
     3721 tcgcgccctt gccctctgtt cccgactcac cgtcactcat ggccgccctt ccttaatgcg
     3781 ctttgtcccc gccgcaagcg gggaatgcgc gcggcctcta actgccgccc ttttctttga
     3841 tgcgctggcc gtcggcgaga ccggccggcg gactcttcac gagcttggtg cccgcgccgg
     3901 gaccgcgtgc gacctcgaac ccgctgccga aagccgg
//
LOCUS       DATIML010001217         3696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_834213, whole genome shotgun sequence.
ACCESSION   DATIML010001217 DATIML010000000
VERSION     DATIML010001217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3696
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834213"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..1284
                     /locus_tag="VLJ38_21015"
     CDS             247..1284
                     /locus_tag="VLJ38_21015"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSU42080.1"
                     /translation="MSTRGRDSGVLVLDGPVAAADPVLERVFRRAMDGLYMVFQPIVS
                     WTEREIVAYEALVRTCEPELARPDLLFSAAERLGMIIPVGRRIRRGVAQLVGTAPERV
                     SLFVNVHGGELADPELYDAESPLSRVAHRVVLEITERWSLDGFDDIGERISALRALGF
                     RVAVDDLGAGYAGLTSFARLRPEVVKLDMSLIRGVNEDPTRQHLIRSLNGACRDLGIR
                     VVAEGVETKEERDTLVALGSNLLQGYLFSKPARAFPVVESACWDAPYKQVQGWPARTA
                     QTELLELRDAINALLGSLSQDPSHTPVPEVSALGRRALRSVEALLATNNLPSLEPGAL
                     SLPAPKLARTA"
     gene            1449..3275
                     /locus_tag="VLJ38_21020"
     CDS             1449..3275
                     /locus_tag="VLJ38_21020"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HSU42081.1"
                     /translation="MRRTWTLLGSGLVVALMAGCSSDAGSSPSGANAGGSSALGSGGS
                     TSGGSATGGGTGGGAKTGGTSGSSGTTNASTGGASGSSGTSGNSGSAGTASVDCQTTA
                     LEPTSLRRLTRFEYANTVKDLLKVDPSPVSDMPADEVSNGFDNDSGVLTVSSLHAEKY
                     VLVSEALAKAAVQNLSALTTCDTTATGEDACALAFAKSFGRRAFRRPTTPNDEQALMA
                     AYAAGKTGGSYAEGIEVMIRAALQSPNFVYRLETTTPANTTAALVPLSQFELATRLSY
                     MIWASGHDDALLDAAQNGALSSKDQVAAKAREMLNDPRAKLGLGNFFSEWSGVTRLSI
                     TTKNTTLFPNYSDDLRDAMARELPAFMQYVLYQGDHTLRTLLTSQVAFVSGPLGSVYG
                     LSNAPTGTTPTLVTLPESQGRSGLLTQAGFLSVQGHPDQTSPVLRGKFVRAMLLCDPV
                     SPPPPTVNTSLPTAAQGATARERFSSHATGSCQGCHSLMDPIGFAFENFDALGQYRTT
                     DNGETIDASGVINTPNDPSLEGNFVGVRGLAEKLVSSSQVSDCMATQWFRYSSGRLEA
                     EPDSCSLAQLRGKFSSSGGDLVELVVGMTQTDDFWYRAPVTQ"
     gene            3293..>3696
                     /locus_tag="VLJ38_21025"
     CDS             3293..>3696
                     /locus_tag="VLJ38_21025"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HSU42082.1"
                     /translation="MNPLRFTRRNLLRGSLAATAAFPLLESRRVEGQSAASPTRLVVF
                     TTPNGTRNALYWPTGSETDFTLPMITAPLEPFKPKLTFLKGIQLNDALQNGMLGGNLG
                     SEHARGTGGMLTGRPLNAGKDFVSFGNTTSGWG"
BASE COUNT          596 a         1269 c         1217 g          614 t
ORIGIN      
        1 gagaacgcgc cgctcgtgaa agacgtgaag gctgcggcca atcggcggct ggcgattctc
       61 gcggtgcgca agggcttcga gtcgtcgctc gcgtacggta tgctcaaaca gccggtgatg
      121 taggcgaact ccgtacggag acgtcgcgct ctgcgcgtcc gtgcgcgacg gtgcgacggt
      181 gcgtgtcggt gcgcggcgca aaaaaagcgt tcaaggtccc tgcgcgcgcg ccgttcgact
      241 agagtcatga gcacgcgtgg ccgcgattcg ggggtcctgg tcctcgacgg accggtcgcc
      301 gccgccgatc ccgtactcga gcgcgtcttc cgtcgcgcca tggacggcct gtacatggtg
      361 tttcagccca tcgtgagctg gacggagcgg gaaatcgtcg cctacgaagc gctggtccgc
      421 acctgtgagc ccgagctcgc gcgcccggac ctcctgtttt cggcggccga gcgcctcggc
      481 atgatcatcc ccgtgggtcg ccgcatccgc cgcggcgtcg cgcagctcgt gggcacggcg
      541 cccgagcgcg tctcgctgtt cgtcaacgtc cacggcggcg agctcgccga ccccgagctt
      601 tacgacgccg agtcgccgct ctcgcgcgtc gcgcatcgcg tcgtcctcga aatcaccgag
      661 cgctggtcgc tcgacggctt cgacgacatc ggtgagcgca tcagcgccct gcgcgcgctc
      721 ggctttcgcg ttgcagtcga cgacctcggc gccggctacg cagggctcac gagctttgcg
      781 cgcctgcgcc cggaggtcgt caaactcgat atgtcgctca tccgcggcgt gaacgaagac
      841 cccacgcgcc agcacctgat tcgctcactc aacggcgcct gtcgcgacct cggcatccgc
      901 gtcgtagccg aaggcgtcga gaccaaagaa gagcgcgaca cgctcgtggc gctcggctcg
      961 aacctgctcc agggctacct cttcagcaaa cctgcgcgcg cgttccccgt ggtcgagagc
     1021 gcctgctggg acgctccgta caagcaggtc caaggctggc ccgctcgtac cgcgcaaacc
     1081 gagctcctcg agctccgcga cgcgatcaac gcgttgctcg gcagcctctc gcaggacccg
     1141 tctcacacgc ccgtccccga agtcagcgcg ctcggccgcc gcgcgctccg cagcgtcgaa
     1201 gcccttctcg ccaccaacaa cctgccgtcg ctcgagccgg gcgcgctctc cctgcctgca
     1261 cccaaactcg cgcgcacggc ttaggcggcg ctcttcatac gtgtcgggcg tgcgctctca
     1321 cggaaaaatt ccgctcccgt ggcgcgccct cacgcctctc cgctaattac ttgcaccaag
     1381 gggagcgaaa ataaggatta gcctcgtgct gtgggcatag cctagctgtg atttccggag
     1441 gtgtagccat gcggcgcacg tggaccctgc ttggaagtgg tttggttgtg gcgctcatgg
     1501 ccggctgctc gtccgacgcg ggttcatcgc cttcgggcgc gaacgctggc ggctcgagcg
     1561 cgctcggttc gggcgggagc acgtccggtg ggagcgcgac gggcgggggc acggggggtg
     1621 gcgcaaagac cggcggcacg agcgggtctt cgggcacgac gaacgccagc acgggcggtg
     1681 cgtccggttc ctcgggcacg tcgggaaatt cggggagtgc aggtactgcc agcgtcgatt
     1741 gtcaaacgac tgcgctcgag cctacgtcgc tccgacgtct cacgcgcttc gagtacgcga
     1801 atacggtgaa ggacctgctc aaggtcgatc cgagtccggt gagcgacatg cccgcggacg
     1861 aggtctcgaa cggcttcgac aacgactcgg gcgtgctcac ggtctcgtcg ctgcacgccg
     1921 aaaaatacgt gctcgtctcc gaggcgctcg cgaaggcggc ggtgcagaac ttgagcgcgc
     1981 tcacgacgtg cgacacgacg gccacgggtg aggacgcgtg cgcgctcgcg tttgcgaaga
     2041 gcttcgggcg ccgcgcgttc cgtcgcccca cgacgccgaa cgacgagcag gcgctgatgg
     2101 ccgcgtacgc ggcgggcaag acgggtggtt cgtacgccga gggcatcgag gtgatgatcc
     2161 gcgccgcgct gcagtcgccg aatttcgttt atcggctcga gacgacgacg cccgcgaaca
     2221 ccactgcggc gctcgttccc cttagccaat tcgagctcgc gacgcggctc tcttacatga
     2281 tttgggcgag cggtcacgac gacgccctgc tcgacgccgc tcaaaacggc gcgctctcga
     2341 gcaaggatca ggtggcggcg aaggcacgcg agatgctgaa cgatccgcgc gccaagctcg
     2401 gcctcgggaa tttcttcagt gagtggtcgg gcgtgacacg gctttcgatt acgaccaaaa
     2461 atacgacgct gttcccgaac tactcggacg acctgcgcga cgcgatggcg cgcgagctcc
     2521 cggcgttcat gcagtacgtg ctctaccaag gcgaccacac gcttcgcacg ctgctcacga
     2581 gccaggtggc gttcgtgagc ggaccgctcg gttccgtcta cggcctgtcg aatgctccta
     2641 cggggacgac gccgacgctg gtgacgctcc cggagagtca ggggcgttcg ggtttgctca
     2701 cgcaagccgg cttcctatcg gtgcagggcc accccgatca gacttcgccg gttttgcgcg
     2761 gcaagttcgt gcgcgccatg ctgctttgcg atcccgtgtc gccgccgccg cccacggtga
     2821 atacgtcgct gcccacggcg gctcagggcg cgaccgcgcg cgagcgtttc tcgtcgcacg
     2881 cgacgggctc ctgccagggt tgccactcgc tcatggatcc gattggattt gcgttcgaga
     2941 atttcgacgc gctggggcag taccgcacga cggacaacgg cgagaccatc gacgcctcgg
     3001 gtgtcatcaa cacaccgaac gatccgagcc tcgagggcaa cttcgtcggc gtgcgcggcc
     3061 tcgccgagaa gctcgtgagt tcgagtcagg tcagcgactg catggcgacg caatggttcc
     3121 gctactcctc cggccggctc gaagccgaac cggacagctg ctcgctcgcg cagctgcgcg
     3181 gcaaattcag ctcgagcggc ggcgatctcg tcgagctcgt cgtcggcatg acgcaaacgg
     3241 acgacttctg gtaccgcgcg ccggtgaccc agtgaacgga cgaggtaggc ccatgaatcc
     3301 cctacgtttc acgcgacgga acctgctgcg cggctcgctc gccgccacgg ccgccttccc
     3361 cctgctcgaa tcgcgccgcg tcgaaggcca gagcgccgcg tcgcccacgc gcctggtcgt
     3421 gttcacgacg ccgaacggca cgcgcaacgc cctctactgg ccgaccggca gcgagacgga
     3481 cttcacgctg ccgatgatca cggcgccgct cgagccgttc aaaccgaagc tcacgttctt
     3541 gaagggcatc cagctgaacg acgcgctgca gaacggcatg ctcggcggca atctcggctc
     3601 cgagcacgcg cgcggcacgg gcggcatgct cacgggtcgt ccactcaacg caggcaagga
     3661 cttcgtcagc ttcggcaaca cgacgtcagg ctgggg
//
LOCUS       DATIML010001218         2284 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1413232, whole genome shotgun sequence.
ACCESSION   DATIML010001218 DATIML010000000
VERSION     DATIML010001218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1413232"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..627
                     /locus_tag="VLJ38_21030"
     CDS             <1..627
                     /locus_tag="VLJ38_21030"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HSU42083.1"
                     /translation="TGKIARDADGRLDGALILPEGGTVSAFGQVFRLKRSSVRFAKQP
                     VELGVLTFQASARTVEGVLVDLDVSGTVNKPVVRFRSDPPRSEAEIISLLLGIRPDDT
                     QAVPGKQDVGGSAMALAMNQLLQNSPLAGFQFGETQSRTGDTISTVSFRAGNKVWLEG
                     WSTRQNQGTPYETTRSSGVVDWRFAPGFSLRTQLGYPSGLEMRWSHRY"
     gene            660..1337
                     /locus_tag="VLJ38_21035"
     CDS             660..1337
                     /locus_tag="VLJ38_21035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42084.1"
                     /translation="MLERVSRRAAALWVRVLYVAAALLPAHVARAQAQPQPPATNTPG
                     PSSAPPAPSQTLEASPTPSEPPPTIPYDEAAVRRRLGNAFGRGSVRLTLLLGTGSTVT
                     DTYFILGGGLGYFVLDGLEVGLDYEAWLFGTPVMQRLSPEIRYVFHMVPVVKPYVGFF
                     YRHTFIKKYDDFDYLGGRVGVYVAPEQSRLYFGGGAVYEHMLSCTSDAFIDCDQWYPE
                     VTIGVMF"
     gene            1375..>2284
                     /locus_tag="VLJ38_21040"
     CDS             1375..>2284
                     /locus_tag="VLJ38_21040"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HSU42085.1"
                     /translation="MSRWLRLFVVAACFFTSTFGHNHVLHAQPAPAPAPTADPSWLKA
                     VYEQVAASVVLIQTEYGTGSGFFFKSERLIATALHVVDDAEIIVVQLNDGRRVAARVV
                     AYSRLHDVALLELEAPVAGARVLEPYTGVVDIGENVLVIGHPFSGLEDQVPELRGLLN
                     WSLTRGIVSAVAGSWLQTDAAINPGNSGGPILNAHGQVLGVVSAKLSDAQGISVAARI
                     GRVQDLVPKIGQQSPPRHNWRFEGMEIGFIAQISRDTLEGISLGGGSRLFKRYPLRLR
                     LGLLAGSVEPHESTVLESHLTRFTAEL"
BASE COUNT          369 a          768 c          737 g          410 t
ORIGIN      
        1 accggcaaaa tcgcgcggga cgcagacggc cgcctcgacg gtgcgctcat cctgcccgaa
       61 ggcggcacgg tatcggcatt cgggcaggtg ttcaggctca agaggagcag cgtgcgtttc
      121 gcgaaacagc cagtcgagct cggtgtgctg acgttccagg cgtcggcgcg caccgtcgaa
      181 ggagtactcg tcgacctcga cgtgagcggc acggtcaaca agccggtcgt gcgttttcgc
      241 agcgacccgc ctcgcagcga agccgaaatc atctcgctct tgctgggcat tcgacccgac
      301 gacacccagg ccgtacctgg caagcaggac gtcggcggga gcgcgatggc gctcgcgatg
      361 aaccagctcc tgcagaattc gccgcttgcc ggctttcagt tcggtgagac acagagtcgc
      421 acgggtgaca cgatcagcac ggtctcgttt cgggccggca acaaggtgtg gctcgaaggt
      481 tggtcgacgc gccagaacca aggcacgccc tacgaaacga cgcgttcgag cggcgtcgtg
      541 gattggcgtt ttgccccggg cttcagctta cgcacacagc tcggctaccc gtcgggtctc
      601 gagatgcgct ggtcgcatcg ctactgacgc ggctcgaggt tcacgctaga tcggcatcga
      661 tgttggaacg ggtgtcgaga cgcgcggcag cgctatgggt tcgcgtgctt tacgtcgccg
      721 cagcgctctt gccggcgcac gtggcgcgcg cacaggcgca gccgcagccg cctgcgacaa
      781 atactccggg accgagctca gcgccgcccg cgccgtcgca aacactcgaa gcctcgccca
      841 cgccgagcga gcccccgccg acgatccctt acgacgaggc ggccgtgcgc cggcggctcg
      901 ggaacgcatt cggccgcggc tccgtgcgac tcacgttgct gcttggtacg ggctcgaccg
      961 tgacggacac ctacttcatt ctgggcggcg gcctcggtta cttcgtgctg gacgggctcg
     1021 aagtgggcct cgactacgag gcctggctct tcggcactcc cgtgatgcag cggctcagcc
     1081 ccgaaattcg ctacgtcttt cacatggtgc cggtcgtcaa accctacgtc ggtttctttt
     1141 atcgccacac gttcatcaaa aagtacgacg acttcgatta tcttggcggc cgggtcggcg
     1201 tgtacgtcgc gcccgagcag agccgcctct acttcggagg cggcgccgtc tacgagcaca
     1261 tgctcagctg cacttccgat gctttcatcg actgcgacca gtggtatccc gaggtcacga
     1321 tcggcgtcat gttctgagct cgcgctcggg gggcgggcgc gagcgcgcgt gcgcgtgagc
     1381 cgctggctac gactgttcgt ggtcgcggcc tgcttcttca cttcgacgtt cgggcacaat
     1441 cacgtcctcc acgcacagcc cgcgccggcg cccgcgccca cggccgatcc gtcgtggctc
     1501 aaagcggttt acgagcaagt cgccgcatcc gtcgtcctga tccaaaccga gtacggcacg
     1561 ggcagcggct tcttcttcaa aagcgagcgc ctgatcgcga cggcgctcca cgtcgtcgac
     1621 gacgcggaaa tcatcgtcgt ccagctgaac gatggccggc gcgtcgccgc gcgggtcgtc
     1681 gcgtattcgc gcctgcacga tgtcgcgctg ctcgagctcg aagcgcccgt cgccggtgcc
     1741 cgcgtgctcg agccgtacac gggggtggtc gacatcggcg agaacgtcct cgtcatcgga
     1801 catccgtttt ccgggctcga ggaccaagtg ccggagctcc gtggcctctt gaactggagc
     1861 ctgactcgag ggatcgtgag cgccgttgcg ggctcatggc tccagaccga cgccgcgatc
     1921 aatccgggta attctggcgg gccgatcctc aacgctcacg gccaggtgct cggggtcgtg
     1981 agcgccaagc tgagcgacgc ccagggcatc agcgtcgccg cccgcattgg ccgcgttcaa
     2041 gacctcgtgc cgaagatcgg ccagcagtcc ccaccgcggc acaactggcg cttcgagggc
     2101 atggagatcg gcttcattgc gcaaatttcg cgcgacacgc tcgagggcat ctcgctcggc
     2161 ggcgggtcgc ggcttttcaa gcgttaccca ctccgattac gactcggcct gctggctggt
     2221 agtgtcgaac cgcacgagtc caccgtgctc gagtcgcacc tcacgcgctt tacggcggag
     2281 ctcg
//
LOCUS       DATIML010001219        10259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_252982, whole genome shotgun sequence.
ACCESSION   DATIML010001219 DATIML010000000
VERSION     DATIML010001219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10259
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252982"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VLJ38_21045"
     CDS             complement(<1..300)
                     /locus_tag="VLJ38_21045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42086.1"
                     /translation="MELNIRPDQLPAQAIEISADERTNGRLSPENHQLAMAVLSYRGY
                     VILKDALDQPFVSTLKCEFDEILEDCRVTTDLRETGADPLDSHMVHVSPRKQAHFW"
     gene            complement(502..1167)
                     /locus_tag="VLJ38_21050"
     CDS             complement(502..1167)
                     /locus_tag="VLJ38_21050"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSU42087.1"
                     /translation="MKPARAIHVVQGSGTPLIVLLHGFAGSADDLAPFAKSLGVAGHF
                     VFPEAGLTLEAYDLPGRAWWPSDGSRGDGVRPRAGGARDLSDFEPEALDTAREHFSDF
                     LDELQAEHGGELVLGGFSQGAMLAFDVALRTPRAIKALVQFSGCRIARRRWDPRLTAR
                     AGMRAFVSHGRFDDDLSFEATEAFVTDLVAAGWNIDFCPFDGGHEMPLPVLRRLKAFL
                     RSL"
     gene            1465..3252
                     /locus_tag="VLJ38_21055"
     CDS             1465..3252
                     /locus_tag="VLJ38_21055"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSU42088.1"
                     /translation="MLEPVWFGDDARPLFGFYHPPSRDSARTAVVLCNPFGHEAMSSH
                     RAYLALASRLANAGFPTLRFDYDGTGDSAGGAQDPERVAAWLRSIAAARDFVLAQSGL
                     DQVVLVGTRLGALLALRYATERPVDGLVLFAPPASGRAWVREMRALQLVRDGGQERES
                     AVMGFPLSEETANEIAQISIKSITQVPSKFALLVPRDDLGTGESDLARHLHSLGVETT
                     TKAAPGYAALMHDDPIKALAPEQVFETIVAWLRTTFEPGSKRGAELAPSSESARRGNG
                     AGKTASATALPEPGVREEALLFQGLFGILNTPAVPGSRAQTAVVFFNIGANHHVGNNR
                     MYVTLGRQLARQGFSALRMDFSGIGDSYAPRGVRENDVYAKRFFGEARTAIDFLQARG
                     VKHFVLVGLCSGAYVAYHTAVADPRVKGIVLINLLTFYWQEGDSLEIRTRNSTKSTLF
                     YRKALLKPSTWLRVARRGVNTRVVARALFQRAALRVRREAAKVSARITGSVAEATDVG
                     RGFMALDARQVRALLVYGSHDGGIDVIEEHLGPGAHDMRRSTSFRMQIVEGPDHTFTP
                     LWTQLHLYELVIAHVEACHAAVESSDDRS"
     gene            complement(3266..5005)
                     /locus_tag="VLJ38_21060"
     CDS             complement(3266..5005)
                     /locus_tag="VLJ38_21060"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis polyprenyl
                     glycosylphosphotransferase"
                     /protein_id="HSU42089.1"
                     /translation="MLLRKGLITPVQLRQALALQQHEGGHLGKILRRMGACDSRAIAE
                     GLVEQVRTARARGRQRDLVRAAKDNPSIGGLRVPCRPAMVVMVLLLGDLFSLSIAAGV
                     MWWFVSDDILSIAQRVVLASLVPLCVMVLAVARLYAVTPPSPPDEIRSTTGVITLVYL
                     GAWMVSVASRIVAARSLSHGAWAFALFISVLLVPLVRGVLRTTLSKRDWWGHAVVVIG
                     AGRVGRAVVETLLRRPQLGLKPAAILDDDPARQGSVRVAWGEDDMIVEPVVESSRMTD
                     LEPPSSDRAAMEQFAEVGGIPVVGGLELAAVLAQRLDIRAVVIAMPEMDSAAVLNLIE
                     RFGESYTSVLVIPDLFNLAHFGAPTRYLGGVLGLEVQRQLMHRGPRFAKRTMDVALTV
                     VGGLCILPVLVVLALLIKFDSKGSPFYIQKRLGQDGVRFPALKFRTMHVDAHERLKAL
                     LATNPELRAEYEQFHKLSADPRITRVGRVLRKYSLDELPQLWNVLKGEMSLVGPRPYL
                     ETEIPDMHQKEAIVLRVRPGLTGIWQVTTRNESTFDERVNLDVEYVRNWSPWLDLYIL
                     ARTFSVVVEGTGS"
     gene            complement(5140..5376)
                     /locus_tag="VLJ38_21065"
     CDS             complement(5140..5376)
                     /locus_tag="VLJ38_21065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42090.1"
                     /translation="MRVKGMVQVSGSTYRVVRVGFGVYDIVRLLDDAPVGRFCTVPQT
                     RVESTTLDSDLMTEIVRAAIQGAKTSWVGRLSIA"
     gene            complement(5732..7549)
                     /locus_tag="VLJ38_21070"
     CDS             complement(5732..7549)
                     /locus_tag="VLJ38_21070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU42091.1"
                     /translation="MTTFALPFLGEVTIGSAEGSTVRLTEPSIAPLHAVLTTGSRMTV
                     RDAGSGAPTVIGTRRLAPGETSPVSPGVIMLLGTVTLVVQATGASTRLRHVRSHDYFE
                     GRLEDECARAEHSQGAFAVVRLRFTRNQAQALEEGFTRHLRPVDLVAMYASDEYELLL
                     TDATRERAEEIAGWILEHVRAKGLGELTLGLATWPSDGRSPEALLAAAGAGVHGRSEQ
                     PTSRVSAGALEALQPLVERVAQASINVLILGETGVGKEVLARRIHELSPRASRPLLCV
                     NCAALTETLLESELFGHERGAFTGAVQSKPGLLEVAEGGTVLLDELGEMPLSIQAKLL
                     RVVETHSVTRVGGLKARIIDVRFMAATHRDLEAEIARSRFREDLYYRLNGVSLVVPPL
                     RERKDEIAPLAQAFVSDFARQSARPAPKITTGALAVLERYAWPGNVRELRNMMERAVL
                     LTPSDVIDLVHLPLERLGRMLPHERVSELPPLPGAPVARTSAAPPVTGMLPGRTSAPP
                     PAGSAPGTYPAPGAAWSARPGTYSFTPAASSGPEAPLTAEIASAAGGGDERARIIGAL
                     ERCGGNQTHAARLLGVSRRTLINRIQRYNLPRPRKRDEP"
     gene            7860..8096
                     /locus_tag="VLJ38_21075"
     CDS             7860..8096
                     /locus_tag="VLJ38_21075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42092.1"
                     /translation="MQAVKGMVLVEGATYRIVRTSRAKYDVVRISDDSLVGSFQSAPR
                     LELSSAKIDARLLRDIARTAIQGAKTSWVGRLEL"
     gene            complement(8112..9218)
                     /locus_tag="VLJ38_21080"
     CDS             complement(8112..9218)
                     /locus_tag="VLJ38_21080"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU42093.1"
                     /translation="MHAAPAFDVAVIGGGVVGLAVARELAVSGREVVVLEAESAIGTH
                     ASSRNSEVIHAGIYYREGSLKAELCVAGKQRLYEYCEREGVPHARVGKLMVATRDDEV
                     PALERILAQARANGVDDLRWVSAREVHELEPAIVAVRALLSPSTGIIDSHGLLAAFRR
                     DAAAHGAHVVTSTPVLAGRLEARGFALDLGGPEPSTVGCRAVVNAAGLRAPSVSRGIA
                     GLDASAIPGEHFAKGHYFVLAGKAPFRRLVYPIPVPGGLGVHVTLDLAGQARFGPDVS
                     WIDGIDYAFDERRAESFYAAIRTYFPALADGALVPGYTGIRPKLGPAGTAHDFVIQGP
                     AVTGAPGFVGLYGIESPGLTAALAIAERVRALLT"
     gene            complement(9229..9540)
                     /locus_tag="VLJ38_21085"
     CDS             complement(9229..9540)
                     /locus_tag="VLJ38_21085"
                     /inference="COORDINATES: protein motif:HMM:NF018563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HSU42094.1"
                     /translation="MKFENVTALAKANVYFDGKVVSHTVLFPDGSKKTLGLIYAGEFH
                     FGTDAPERMDITAGSCRVRLDGTSEWRDYGTGTSFRVPAKSGFDIAVSAGIAEYVCSF
                     E"
     gene            9818..>10259
                     /locus_tag="VLJ38_21090"
     CDS             9818..>10259
                     /locus_tag="VLJ38_21090"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU42095.1"
                     /translation="MTSNRKRYRVLMVEDSRVSLEVYAQRLERRGYQVATAISAEEAR
                     VELESGLPDLILLDVFMPKVSGFEFVRELRADPKTARVPIILISALSDTQHIVEGLEL
                     GANDYVTKPIVMPILTARIEALMRSSELVRRLEVQTELLSKLAAF"
BASE COUNT         1790 a         3432 c         3387 g         1650 t
ORIGIN      
        1 ccagaagtgc gcctgtttcc tgggcgagac gtgcaccatg tgcgaatcca agggatcggc
       61 acccgtctct cgcaggtcgg tcgtcacacg gcagtcctcc aagatctcgt cgaattcaca
      121 cttcagcgtg ctcacgaacg gctggtcgag cgcgtccttc aagatcacgt agccgcgata
      181 actcagcacc gccatcgcga gctggtggtt ctccggggac agccggccgt tcgtccgttc
      241 atcggccgag atttcaatcg cttgcgccgg cagctgatca ggacggatgt tgagctccat
      301 gagtgttgcg aatgctcctc accccccgca cgtaagttta gaggaagcac aacacagttc
      361 gtgaaaaaaa acttcaacaa accgccttcg aaggcgctgt tcgtctgtcg gtaattcgcg
      421 cacctgcgcc catatgcttc cgaattcccg aaccgtcctt gccgccgtgc cagccagggc
      481 ggcctgctcc gccggcgcga ttcagagcga acgcaggaac gccttcaggc gccgcagtac
      541 cgggagcggc atttcgtgac cgccgtcgaa cggacagaag tcaatgttcc agcccgcggc
      601 cacgagatcg gtgacgaatg cttcggtggc ctcgaacgag aggtcatcgt cgaagcggcc
      661 gtggctcacg aacgcgcgca tgccagcacg ggccgtgagt cgtggatccc agcgccgccg
      721 cgcgatgcgg cagccggaaa actgtaccag tgccttgatc gcgcgcggag tacgtagcgc
      781 cacatcgaag gccagcatcg caccctgcga gaaaccgccg agcacgagct cgccgccgtg
      841 ctcggcctga agctcgtcga ggaaatcgga aaagtgctca cgcgccgtat cgagtgcctc
      901 cggttcgaaa tccgacagat cgcgcgcgcc gccggcacgc gggcgcacgc cgtctccgcg
      961 gctcccgtcc gagggccacc aggcacggcc gggcaagtca taggcttcga gcgtcaggcc
     1021 cgcttcggga aacacgaaat gaccagcgac gcctagcgac ttcgcgaacg gagcgaggtc
     1081 gtcagcgctg cccgcaaagc cgtgtaagag cacgatcagg ggggttccgc tgccctgtac
     1141 cacatgaatc gcccgcgccg gtttcactcg ctaacctcgt agtgcggctc gctcgagccg
     1201 cggcttcgac tcacgacacc tgcgagccgt ccgctcctcg ccacgaagac gttcgctgcg
     1261 gcattcgccg cggccgcaat gagcacctct tggttggttc gtccatgctg ccggcggcga
     1321 cgccagggac gtgcagtcta ctcgaccgcc gcctcgcttg cgacaacggc agtgctcccc
     1381 tacattgctc gctgcatgca ggaagccgca ccgcggagcg ctcgcgcgaa gcaaagctcc
     1441 gatggctcac atgcagccgg ccagatgctg gaaccggtct ggttcggcga cgatgctcgt
     1501 ccgttgttcg ggttttatca cccgccctcg agggacagtg cgcgcacggc cgtcgtgctt
     1561 tgcaacccgt tcggtcacga ggcgatgtcc tcgcaccggg cctatctcgc gcttgcgtcg
     1621 cggctggcga acgctggctt ccccacgctg cgcttcgact atgacggaac gggagactct
     1681 gcggggggcg cacaggatcc cgagcgggtc gccgcgtggc ttcggagcat cgcggctgcc
     1741 cgggatttcg tcctggcgca gagcggcctc gatcaggtgg tactcgtggg gacgcgcctg
     1801 ggcgcgctgc tcgcgctgcg gtatgcgacg gaacggcccg tagacggcct cgtactcttc
     1861 gcccccccag cctccggccg agcgtgggtg agggagatgc gcgcactcca gctcgtgcgc
     1921 gacggcggac aagagcgtga atcggccgta atgggcttcc cgctctccga ggagacggcg
     1981 aacgagatcg cgcaaatcag catcaaaagc atcacgcagg taccgtcgaa attcgcgctg
     2041 ctcgtgccgc gcgacgacct cggcaccggt gagtcggatc tggcgcgaca cctccattca
     2101 ctcggcgtcg aaacgaccac caaggctgcg ccgggctacg cggcgctgat gcacgacgat
     2161 ccgatcaagg cgctcgcgcc ggagcaggtg ttcgagacga tcgtcgcctg gctgcgcacc
     2221 acgttcgagc cgggcagcaa gcgcggcgcc gagctcgcgc cttctagcga atcagcgcga
     2281 cgcggcaacg gtgccggcaa aacggcgagc gccacggcgc tgcccgagcc cggagtgcgc
     2341 gaggaggcgc tgctcttcca aggactcttc ggtattttga acacgcctgc cgtgcctggc
     2401 tcgcgcgcgc agaccgccgt cgtcttcttc aacatcggcg cgaaccacca cgtcgggaac
     2461 aaccgaatgt acgtgacgct cgggcggcag cttgcccgtc agggattcag tgcgttgcgt
     2521 atggactttt cgggcatcgg tgacagctat gcgccccgcg gcgtgcgaga aaacgacgtc
     2581 tacgccaagc gctttttcgg cgaggcgcgc acggcgatcg acttcttgca ggctcgcggc
     2641 gtaaagcact tcgtgctcgt ggggctgtgc tccggagcgt acgtcgcgta tcacaccgcg
     2701 gtcgccgacc cgcgcgtcaa gggcatcgtg ctcatcaacc tcctcacctt ctactggcaa
     2761 gagggtgact cgctcgaaat ccgcacgcgc aatagtacca agtccacgct gttttaccgc
     2821 aaggcgctgc tcaagccctc cacctggcta cgcgtcgcgc ggagaggagt gaacacacgc
     2881 gtcgtggcgc gcgctctctt ccagcgcgcc gcgttgcgcg tacgtcgcga ggcggcaaaa
     2941 gtctcggcgc gaatcacggg ctccgttgcc gaagcgacgg acgtgggccg cggtttcatg
     3001 gccctcgatg cgcgccaggt tcgcgcacta ttggtttacg gctcgcacga cggcggcatc
     3061 gacgtcatcg aagagcatct cggccccggc gcgcacgaca tgcgccgctc gacgagcttt
     3121 cgcatgcaga tcgtcgaggg ccccgatcac acgtttactc cgctctggac tcagcttcac
     3181 ctctacgagc tcgtgattgc gcacgtggag gcgtgtcatg ccgctgtgga gtcgagcgac
     3241 gaccgctcgt gattgctcgc gttcttcagg agcccgtacc ttcgaccacg accgagaagg
     3301 tacgcgccaa aatgtagagg tcgagccaag gcgaccagtt gcgcacgtat tcgacatcga
     3361 ggttcacgcg ctcgtcgaac gtcgattcgt tgcgagtggt cacctgccag ataccggtga
     3421 ggcccggccg tacgcgcagc acgattgctt ctttctgatg catgtcgggg atctcggtct
     3481 cgagatacgg ccgtggcccg acgaggctca tctcgccctt caagacgttc cagagctggg
     3541 gtagctcgtc gaggctgtat ttgcgcagca cccgcccgac gcgtgtgatg cgcggatcgg
     3601 cgctgagctt gtgaaactgc tcgtactcgg cgcgaagctc ggggttcgta gcgagcaggg
     3661 ctttgagccg ctcgtgggcg tcgacgtgca tggtccggaa cttgagagca ggaaaacgca
     3721 cgccgtcttg gccgagccgc ttctggatgt agaaagggga gcccttcgag tcgaacttga
     3781 tgagcagcgc gagcacgacg aggaccggca agatgcagag cccacccacg acggtgagcg
     3841 cgacatccat cgtgcgtttc gcgaaacgcg gcccgcggtg catgagctgg cgctgcacct
     3901 ccagaccgag gacgccgccg agatagcgcg tcggtgcgcc gaagtgcgcg aggttgaaga
     3961 ggtccggaat gacgagcacg ctcgtgtagc tttcgccgaa gcgctcgatc aagttgagga
     4021 cagcagccga atccatctcc ggcatggcga tcaccaccgc gcggatatcg aggcgctgcg
     4081 cgagcactgc cgcgagctcg agcccaccca ccacggggat accgccaact tcggcgaact
     4141 gttccatggc ggcgcggtcc gaagacggcg gttcgaggtc ggtcatcctc gacgattcga
     4201 cgacgggttc gacgatcatg tcgtcctcgc cccacgcgac gcgcaccgag ccctgccgcg
     4261 ccggatcgtc gtcgagaatg gcggcgggtt tgagtccgag ctgcggccga cgcaacagcg
     4321 tctccacgac ggcgcgtccg acacggccgg caccgatcac gacgactgcg tgtccccacc
     4381 aatcacgttt ggacagcgtg gtgcgcaaca caccacgcac gagcggcacg agcagcaccg
     4441 agatgaacag cgcgaatgcc cacgcaccgt gcgacaatga acgggcggcc acaatccgcg
     4501 acgcgaccga aaccatccag gcgccgaggt acacgagcgt gatgacgccc gtggtcgagc
     4561 ggatctcgtc gggcgggctc ggcggcgtca cggcgtagag ccgcgcgacc gcgagcacca
     4621 tcacgcagag cgggacgagc gacgcgagca cgacgcgctg agcgatgctc aggatgtcgt
     4681 cggacacgaa ccaccacatg acgcctgcgg cgatgctcag cgagaacaga tcgccgagca
     4741 gcaggaccat gacgaccatc gcggggcggc acggaacacg cagcccgccg atggatgggt
     4801 tgtccttcgc cgcgcgaacc aaatcgcgct gcctgccacg cgcgcgcgcc gtgcgtacct
     4861 gctcgacgag accctcggcg atcgcgcgcg aatcgcacgc gcccatgcgc ctgaggatct
     4921 tgccgaggtg cccgccttcg tgctgctgca gcgcaagcgc ctgccgcaac tggacgggcg
     4981 tgatgagccc tttgcgcagg agcacctgcc cgagttcgtt gtcgcggcga cgccgtcgac
     5041 gtttgtggaa cgcgcgcgtc ccgtcgggac tgggtccacc agcggctgga ggctgcacga
     5101 gcactcgctg tcggctccgt gctacctagc cccctcaggc taggcgatac tcagccggcc
     5161 gacccagctc gtctttgcgc cctggatcgc ggcacgcacg atctccgtca tcaggtcgct
     5221 atcgagcgtg gtcgactcga ccctcgtttg cgggaccgtg cagaaacgcc ccaccggcgc
     5281 atcgtcgagc agccgaacga tgtcgtaaac gccaaatccc acgcgcacca cgcgatacgt
     5341 cgatccggaa acctgcacca tgcctttgac gcgcatcgtt ctcacctctc gttggcggag
     5401 ccgcgcccgc gagcaagcct tcaacgggta actcaaccgg cggcgtttgt gaagggtcac
     5461 tcagcggatc ctcactcaat gaccaagcca cgccggccaa ggggggccgc catgttgcga
     5521 gtgggttacc ggccctcgtg ccatgcacgc agcaaaaacg tgcgattctg gcggaatttt
     5581 tcttgcctca aggaatcaag gcgctcggcc cggcggccgc ttacccggcg cccgtgcgcg
     5641 gaatgtgcgt gggctttcgt tgacttcgaa ccgacggagg gccccatgag ggtacggagc
     5701 catccgatcg tgcccacgca gtgacgcccg tttacggttc gtcgcgcttg cgtggccgcg
     5761 gcaagttgta gcgttggatg cgattgatca gcgtgcggcg cgacacgccg agcagtcgcg
     5821 ccgcgtgcgt ttgattgccg ccgcagcgct cgagcgcgcc gatgatgcga gcgcgctcgt
     5881 cgcctccgcc ggcggcgctc gctatttcgg cggtgagcgg cgcttctggc ccgctgctcg
     5941 cggcgggggt gaacgagtac gtgccggggc gcgctgacca cgccgcgccc ggtgccgggt
     6001 acgtcccagg cgcgctgccg gccggagggg gcgcactcgt acggccgggc aacatgcccg
     6061 tgaccggcgg ggccgcgctc gtgcgcgcga ccggtgcgcc ggggagcggc ggcaactcgg
     6121 aaacacgctc gtgcggcagc atgcggccga ggcgctcgag cggcaaatgc acgaggtcga
     6181 tcacgtcgga cggcgtcaag agcacggcgc gctccatcat gttccggagc tcgcgcacgt
     6241 tgccgggcca ggcgtaacgc tcgagcaccg cgagcgcgcc cgtcgtgatc ttcggcgcag
     6301 gccgcgccga ttgtcgcgcg aaatcgctga cgaacgcttg cgcgagcggc gcgatctcgt
     6361 ccttgcgttc gcggagcggc ggcacgacga gcgatacgcc gttcaagcgg tagtaaagat
     6421 cctcccggaa gcgcgagcgc gcgatctcgg cttcgagatc gcgatgcgtc gcggccatga
     6481 agcgcacgtc gatgatgcgg gccttgaggc cgcccacgcg cgtcacgcta tgcgtctcga
     6541 cgacgcgcaa gagcttggcc tggatcgaga gcggcatctc gccgagctcg tcgagcagca
     6601 ccgtcccgcc ctcggccact tcgagcaggc cgggcttgga ctgcacggcc cccgtgaacg
     6661 cgccgcgctc gtgaccgaag agctcgcttt cgagcagcgt ttcggtgagc gccgcgcagt
     6721 tgacacacaa gagcggacgg ctcgcgcgcg gagagagctc gtggatgcgg cgggcgagca
     6781 cctccttacc cacgcccgtt tcgcccaaaa tgagcacgtt gatgctggcc tgggcgacgc
     6841 gctcgacgag cggctggagc gcttcgagcg cgccggccga cacgcgcgaa gtcggttgtt
     6901 cggagcggcc gtgcacgccc gctcccgccg cggcgagcag cgcctccggt gagcgcccgt
     6961 cgctcggcca ggtcgcgagc ccgagcgtga gctcaccgag ccctttggct ctgacgtgtt
     7021 ccaagatcca acccgcgatc tcttccgcgc gctcgcgcgt ggcgtccgtg agcaagagct
     7081 cgtactcgtc cgaggcgtac atcgcgacga ggtccaccgg gcgcaggtgt cgcgtgaagc
     7141 cctcttcgag cgcttgcgcc tgattgcgcg tgaagcggag ccgcacgacg gcgaacgctc
     7201 cctggctgtg ctcggcgcgc gcgcattcgt cttcgagccg gccttcgaag taatcgtggc
     7261 tgcgcacgtg gcgcaggcgc gtgctggccc ccgtcgcctg cacgaccagc gtcaccgtac
     7321 cgagcagcat gatgacgccg ggcgagaccg ggctcgtctc tccgggcgca agacgacggg
     7381 taccgatgac cgtcggagcg ccgctcccgg catcacgaac ggtcatccgc gaaccggtgg
     7441 tcaacacggc gtgaagcggc gcgatgctcg gctcggttag ccgcacggtc gagccctccg
     7501 cgctgccaat ggtaacctcg cccaaaaatg gcagtgcaaa cgtagtcatc tgcgcctgcc
     7561 ccagcacgag caagcgaagg ccactcgccc ccgccgagga gggcggcgcc gagctccggc
     7621 ggccgggcga gtgggtgatc aatctgtgca aacgcgtcgc gcagattgtg caagcggtca
     7681 atgcttattg tgcaagttat ggcggccggc cgacttgacg ccgcatcgaa caaaatataa
     7741 gtgatgcgat tctgaagagt tagatattcg caccgctttg actcgatgtg caaagttggc
     7801 ggcatgtctg ttgcataatg cccagcttcg aaaactcgtt caggagagca aggaagagaa
     7861 tgcaagccgt caaagggatg gtgttggtgg agggagcgac ctatcgcatc gtgcgcacgt
     7921 cgcgcgcgaa gtacgacgtg gtccggattt ccgacgatag cctcgtcggc tcgtttcaaa
     7981 gtgcaccacg gctcgagctc agctcggcca agatcgacgc tcggctgctg cgcgacatcg
     8041 cgcgcacggc cattcagggc gcaaagacga gctgggtcgg ccggctagag ctctgaatcg
     8101 actcgccggc gttacgtcag gagcgcgcgc acgcgctcgg cgatggcgag cgcggccgtg
     8161 agccccggtg attcgatgcc gtacaggccg acgaatcccg gggctcccgt tactgcgggg
     8221 ccctgaatca cgaaatcgtg cgcggtaccc gccggaccga gcttcggccg aatgcccgtg
     8281 tagccgggga cgagcgcgcc gtctgcgagc gccgggaagt acgtgcggat cgcagcgtag
     8341 aaactctcgg cgcggcgctc gtcgaacgcg taatcgatgc cgtcgatcca gctcacgtca
     8401 ggaccgaaac gcgcctgacc ggcgagatcg agcgtgacgt gcacaccgag cccgcccgga
     8461 acgggaatgg gataaaccag gcgccgaaac ggcgctttgc ccgcgagcac gaagtagtgc
     8521 cccttcgcga agtgctcgcc cgggatcgcg ctcgcgtcga gcccggcgat gccgcgtgag
     8581 accgatgggg cacgcagacc ggcggcgttc acgacggcac ggcaaccgac ggtcgacggc
     8641 tccggcccgc cgaggtcgag cgcgaagccg cgcgcttcga gccgccccgc gagcaccggc
     8701 gtcgaggtga cgacgtgcgc gccatgcgcc gcggcgtcgc gccgaaacgc cgccagcaag
     8761 ccgtggctgt cgatgatgcc cgtcgacggt gaaagcagcg cgcggacggc gacgatcgcg
     8821 ggttcgagct cgtgcacttc gcgcgcagaa acccagcgca ggtcgtccac gccgttcgcg
     8881 cgtgcctggg cgaggatgcg ctcgagcgcc gggacttcgt cgtcgcgcgt cgcgaccatc
     8941 agcttgccga cacgcgcgtg cggcacccct tcgcgctcgc agtattcgta caagcgctgt
     9001 ttgcccgcga cgcagagctc ggctttgagc gacccctctc ggtagtagat gccggcatgg
     9061 atcacctccg agttacgcga gctcgcgtgc gtgccgatag cgctctcggc ttcgagcacg
     9121 acgacctcgc gcccgctcac ggcgagctcg cgcgcaacgg cgagccccac gacaccgccg
     9181 ccgatcaccg caacgtcgaa cgccggtgcg gcgtgcatgc acgcctcgtc actcgaacga
     9241 gcagacgtac tcggcgatgc ccgcgctcac ggcgatgtcg aagccggact tcgccgggac
     9301 gcggaagctc gtccccgtgc cgtagtcgcg ccactcgctc gtgccgtcga gccgcacgcg
     9361 gcagctcccg gccgtgatgt ccatgcgctc gggggcgtcg gtgccgaagt gaaattcacc
     9421 ggcataaatg agacccagag tcttcttgct gccgtccggg aagagcacgg tgtgggacac
     9481 caccttaccg tcgaaataga cgttcgcttt ggcgagggcc gtcacattct cgaatttcat
     9541 gcgcgctgcc atagcaggcc ccccggatgg gcgcgaggcg cgccgcgtcc cagcgccggc
     9601 ccttgactcg atgccaaaag gaaactctcc tctcaaagac tacttcgcca gtctttggca
     9661 ggagcagatc acgatcggcg tgggtagcca tgcgcgtaac gaccggcgac gccggtctcc
     9721 tacgtgggcc atggcaacat ctggcgatcg tgatctggcc atgccgagac gggcgaagta
     9781 gtgtgtagaa ggcctcccgc aaatcggcct cggcagcatg acgagtaaca gaaaacgtta
     9841 ccgggtcctg atggtggagg acagccgcgt gagcctcgag gtttacgcgc agcgcctcga
     9901 gcgacgcggc taccaggtcg cgaccgcgat ttcggcggag gaggcgcgcg tcgagctcga
     9961 gtccggcttg ccggacttga tcctgctcga cgtgttcatg ccgaaagtga gcggcttcga
    10021 attcgtgcgc gagctgcgcg ctgacccgaa aaccgcgcgc gtgccgatca ttttgatttc
    10081 ggcgctgtcc gacacgcaac acatcgtcga gggcctcgag ctcggagcga acgactacgt
    10141 gaccaagccc atcgtgatgc cgatcctcac ggcgcgcata gaggcgctca tgcgctcgag
    10201 tgagctcgtg cgccggctcg aagtgcagac ggagctgctc tccaagctcg cagcgttcg
//
LOCUS       DATIML010001220         2763 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_253359, whole genome shotgun sequence.
ACCESSION   DATIML010001220 DATIML010000000
VERSION     DATIML010001220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2763
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253359"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..987)
                     /locus_tag="VLJ38_21095"
     CDS             complement(73..987)
                     /locus_tag="VLJ38_21095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42096.1"
                     /translation="MFLGKKAFGVLGAGVFAACGGQQAAPQTAPEPTQPAPTANASSE
                     APAPSASETPPPVATASPSQAPAAPAPPPISELCEKMCDAQRAKCSADKVDACKQNYC
                     SRYGGAPEVCEPAVRAALGCTRSNPEFSVCSNVISEGCAKPFRAAEKCIATGVAPADL
                     APPKEIPDGWTRYESAEGAFSVALPPNVETKSEGGVKVWSAKDGAASYEITLGPPPAE
                     KKFDQKAFVRIATKLLGKCAPKMKLFALVEKPESTLIHYRTVCPDKTQERGELFVQGN
                     DYFVLRARWGAGPNPNADAFAFTFVRKK"
     gene            complement(1039..1740)
                     /locus_tag="VLJ38_21100"
     CDS             complement(1039..1740)
                     /locus_tag="VLJ38_21100"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU42097.1"
                     /translation="MPEGSEELARFESGLDLVEAIARRIAREVGAHVELSELLSYGRE
                     GLLDAARRFDASRGVPFRGYASFRVRGAIIDGVRKSARLPRRTHERLSGLLAASRTSE
                     GAYEDVLAPPLPGATPVDAERALSEHLAAMATAVAVGLLAHTGFGDEGERVPVTTDED
                     AEAALGRAELVALVKHAITELPPEEAALVRRHYLEGERFDHVAAELGLSKSWASRLHT
                     RAIKRLTQKLRDSGG"
     gene            1926..2480
                     /locus_tag="VLJ38_21105"
     CDS             1926..2480
                     /locus_tag="VLJ38_21105"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HSU42098.1"
                     /translation="MALFAALLALALRGSLPFKGAAWLPLSSPSDVLYSTALGACFGL
                     LVAVGTRFCVPRFAWAKNLHRELRPLTRGLTGAGIVGLAVTSSLGEELLFRGLLQPWL
                     GLWLQALLFGVLHQLAGTSRWVWAGWATLVGFVLGAIFALTGSLAGPLAAHALINGLN
                     LSYLRSHDTEPPQGLGGLLGARGR"
     gene            2564..>2763
                     /locus_tag="VLJ38_21110"
     CDS             2564..>2763
                     /locus_tag="VLJ38_21110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU42099.1"
                     /translation="MAQLDSSFPEDRPRVLVVDDEKFIRDIIADFLGMEGYIVRTAED
                     GSSAMKELERARYDMVISDLKMP"
BASE COUNT          388 a          956 c          949 g          470 t
ORIGIN      
        1 acgcactgcg gggatgttca tgcggcgggg gccgtcagcg ggcggaaagc ggccagggcg
       61 gaaaccagag cgctacttct tgcgcacgaa cgtgaacgca aacgcgtcgg cattcgggtt
      121 cgggcctgcg ccccagcggg cgcggagcac gaaatagtcg ttcccctgca cgaagagctc
      181 gccgcgctcc tgcgtcttgt cggggcacac ggtgcggtag tgaatcagcg tgctctccgg
      241 cttctcgacg agcgcgaaga gcttcatctt cggcgcgcat ttgccgagga gcttcgtcgc
      301 gatgcgcacg aacgccttct gatcgaattt cttttcggca ggcggcgggc cgagcgtgat
      361 ttcgtaactg gcagcgccgt ccttggcgct ccaaaccttc acgccgccct cgctcttggt
      421 ttcgacgttc ggcggcaagg cgacgctgaa ggcgccctcg gccgattcgt agcgcgtcca
      481 gccgtcgggg atctctttgg gcggcgcgag atcggcgggc gcgacgccgg tcgcgatgca
      541 cttttcggcg gcgcggaacg gcttggcgca gccctccgag atcacgttgg agcacaccga
      601 aaattcgggg ttactgcgcg tgcacccgag cgcggcgcgc acggcgggct cgcacacctc
      661 gggcgcgcca ccgtaacggc tacagtaatt ctgtttgcac gcgtcgacct tgtcggccga
      721 gcacttcgcg cgctgggcgt cgcacatttt ttcgcacagc tccgagatgg gcggcggcgc
      781 gggcgcagcg ggcgcttggc tcgggctcgc ggtcgcgact ggcggcggcg tctcgctcgc
      841 gctcggagca ggcgcttcgg agctggcgtt cgcggtcggc gcaggctgcg tgggctccgg
      901 cgcggtttgc ggcgccgctt gctggccgcc gcacgcggca aaaacccccg cacccagcac
      961 gccgaacgcc ttctttccga ggaacatgtg cgagcggtat cgggacgcgc gcgctccgtc
     1021 aagttctgaa ccgagcctct agccgcctga atcccgcaat ttctgagtca gccgcttgat
     1081 cgcccgcgtg tgcaggcggc ttgcccagct cttgctcaac ccgagctcgg cggcgacgtg
     1141 atcgaaacgc tccccttcga ggtagtggcg gcgtacgagc gcggcctcct cgggaggtaa
     1201 ctccgtgatc gcgtgtttca cgagggcgac gagctcggcg cgaccgaggg cggcctcggc
     1261 atcttcgtcc gtcgtcaccg ggacgcgctc accctcgtcg ccgaagccgg tgtgggcgag
     1321 caagccgacg gcgacggccg tggccatcgc cgccaagtgc tcggacagag cgcgctcggc
     1381 atcgaccggg gtcgcgcccg gcagcggcgg ggcgagcacg tcttcgtacg cgccctcgct
     1441 cgtgcggctc gcggcgagca gtccgctcag acgctcgtga gtgcggcgcg gcaagcgagc
     1501 gctcttgcgt acgccgtcga tgatggcgcc acgcacccga aagctcgcgt aacctcggaa
     1561 cggcacgcca cgactcgcat cgaaccgacg cgcggcgtcg agcagaccct cgcgcccgta
     1621 actcaacagc tcggagagct cgacgtgggc accgacttcg cgcgcgatgc gccgggcgat
     1681 ggcctcgacg agatcgagcc ccgactcgaa gcgggcgagc tcctccgacc cttcgggcac
     1741 gaatgtctcc tctcggcact ctatcgagtt cgtcccggct cgcaacgggc tctagcgaga
     1801 cggcaggccg gcgcggattg cggccacatt tcacggagga gacggctcgg caggcgcgaa
     1861 agcgcgtggc atagtgccgg gacactatgg cgcgatgggg ccgcttcgcc gccgcatacg
     1921 cgggcatggc gctattcgct gcgctcctcg cgcttgccct gcgcggctca ctgccgttca
     1981 agggagccgc gtggctgccg ctcagctcgc cgagtgacgt gctctacagt acggcgctcg
     2041 gcgcctgctt cggtttgctc gtcgcggtcg gcacgcgctt ttgcgtgccg cgtttcgcgt
     2101 gggcgaagaa cctgcaccgt gagctcaggc cgctcacgcg cgggctcacg ggtgcgggca
     2161 tcgtcggcct ggccgtcacg agctcgctcg gcgaggagct gctctttcgc ggactgctcc
     2221 agccgtggct cggcctatgg ctgcaggcgc tcctcttcgg cgtcttgcac cagctcgccg
     2281 gcacgagtcg ttgggtttgg gccggctggg cgacgctcgt cggattcgtc ctcggcgcca
     2341 tctttgcgct gacagggtca ctggccggac cgctcgccgc gcacgcgctg atcaacggtc
     2401 tcaacttgag ctacctccgc tcacatgaca ccgagccgcc gcaggggctc ggtgggctgc
     2461 tcggcgcgcg aggccgctga cgcgcccccg gcgggggcat ctcgacgcgc gcagatggtg
     2521 ttacgcttcg gcttgctgcc cgccctccgc ggctgcctcc gccatggcac agctcgactc
     2581 ttccttcccc gaggaccgac cgcgcgtcct cgtcgtcgac gacgaaaaat tcattcgcga
     2641 catcatcgcc gactttctcg gcatggaggg ctacatcgtg cgcacggccg aggacggctc
     2701 gagcgccatg aaggagctcg agcgcgcgcg ctacgacatg gtcatcagcg acctcaagat
     2761 gcc
//
LOCUS       DATIML010001221         4739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4879174, whole genome shotgun sequence.
ACCESSION   DATIML010001221 DATIML010000000
VERSION     DATIML010001221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4739
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4879174"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VLJ38_21115"
     CDS             <1..213
                     /locus_tag="VLJ38_21115"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSU42100.1"
                     /translation="WVEYFKGGYALHAAYWHDDFGRTRSHGCVNLSPIDARYVFLWTT
                     PEVPAHWHAAYAGEPFENGTIVNIHP"
     gene            367..819
                     /locus_tag="VLJ38_21120"
     CDS             367..819
                     /locus_tag="VLJ38_21120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42101.1"
                     /translation="MNSRNLDDGSVLHFDAQGIMQIHDFGRGVSLHVRRGIMTLDFAK
                     HVIQDGERHLRTSGRYVLMVDGAETRMHTTEFREVMTKWFTQHDSAVVHMLIKSRMLE
                     MALNVANLMVGGRARAYFNPEVWESIGRQEVPSFIRRPLVVPSDVKTG"
     gene            complement(845..3166)
                     /locus_tag="VLJ38_21125"
     CDS             complement(845..3166)
                     /locus_tag="VLJ38_21125"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HSU42102.1"
                     /translation="MPKVLRAFFALLGVFLVLVSSRAVADSDDAPPVTANGNLLFRLR
                     PIHSDAHRRLDQLTDGRRGREGDSWKSLATVPLAGRDTYVVYDLGKPTPIAGAWLQGD
                     NNDTYEVEGSLDGEHFQTLWVAPVVHQAGLRTRSTTDLHATARYVRLHPKSGDGFFGV
                     TELELFSSVPAEFPGNVPEVRSGSLDAHFRDATVLFGLSLMAPLLLYRGAKPSLVVLA
                     LLVAGIGIFNFVVAYLDALPIDPREVSLVRGTVGLAAALTVAREAFAPKRFPAVRAVI
                     LATLGLTGVLGVVCFYNLAQPQFYSRGRDEWTFAHYLDLRQYYTTAKYFRELGYRGIY
                     EADVATFLEDHPERKESIENIPMRDLHSHRMSTPERQEARIKAIKSRFTPERWEELKE
                     DERWFRDAMGNSHWLEMLCDFGGNATPVWMTIAHFLFSATPPSNLGFTLLGFIDLALL
                     GGMFFAVWRCYGPRTALIVMTVFGANDFIMYGTNWGGATLRHDWLAYLGYGACALKKE
                     RWALGGALLALSTMIRVFPAVSIAGAALPAAMRISENFVRERRMPRLRELMERERGTV
                     RMLLGAAATVVVTFVISAAVLSPAAWPDCLRKISQLAADSHPASIALRSLIGGWEDNQ
                     ASVIRNRMPLFIAATLLYVGLVALAARRRRADQGALLGMILVPVLTYPANYYIHFVFL
                     LPMLATERRPTDAEPLPASRVDAGVWLTMLFMCAGQYFTVLIPDLGLHFYFETVVLFT
                     TLTVLLALLVKDDVVAWATMEPNGLGPTERPSS"
     gene            complement(3238..4419)
                     /locus_tag="VLJ38_21130"
     CDS             complement(3238..4419)
                     /locus_tag="VLJ38_21130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42103.1"
                     /translation="MTFARRIRVRLRRQLDVSAHALVALAVASSTAGCGNAADKGGSV
                     AVQISGEAAATEGFSFPKGSDVTFADGWELHFSHVLVTVGDVTLSENPDKAPADQAQT
                     GAAVAREAGPWAVDLAVQGGVPAAGGQGTATPLTTIARENLDGDKPFAADRRYAFGYR
                     LVPAETRAARVNFAADAAAEALYARMISEGFTVLYAGTATFAGKDCVTSDPAYDVSAL
                     PTALPFELGFRTPTSYVNCQNQENQGTAFEGEEYQRGIALLPNQPALAQITLHLEHPF
                     FSDTVHDSTIYFDQLAARFDGAALTTDDLVGLDPTAFTDVHGAALPWRVCPSDAAPEL
                     PLGRQRSFGVGHTLVDPVGNPRDAFRDYRDFVAYVQSAQAHLNGGEGLCYVARDYPSP
                     P"
     gene            complement(4416..>4739)
                     /locus_tag="VLJ38_21135"
     CDS             complement(4416..>4739)
                     /locus_tag="VLJ38_21135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42104.1"
                     /translation="QAFEGQLTIGENRLQPTPPAEPGLKPICKERIVSPIPIDVTPAR
                     GSQLTLAVEPAKMFANVDFAELEPNAEGTLQFDDDPATATPASTNLYIGLRASSGVYS
                     FSFTP"
BASE COUNT          818 a         1512 c         1645 g          764 t
ORIGIN      
        1 tgggtcgaat acttcaaggg cggctatgcc ttgcacgcag cgtactggca cgacgatttc
       61 gggcgtacgc gctcgcacgg ttgcgtgaac ttgtcgccga tcgacgcgcg ctacgtcttc
      121 ctctggacga cgccggaagt ccccgcgcac tggcacgccg cgtacgcggg cgaaccgttc
      181 gaaaacggca ccatcgtcaa catccatccg tagccggctc gggcgcgcga cggccgcggc
      241 gcgaggcagc ggaacgcccc gaaaagcttc acccggaagc ttcggcccgc tgcggcgtgg
      301 taggaatact gggagagtgc aaaaaacagc gctaagcttc gtagaccgcg cgaggtgggc
      361 tccacgatga actcgcgaaa tctcgacgac ggcagcgtgc tccacttcga tgcgcagggg
      421 atcatgcaga tccacgactt cgggcggggc gtgtcgctgc atgttcggcg cgggatcatg
      481 acgctcgact tcgccaagca cgtgattcag gacggcgagc ggcaccttcg gacgagcggt
      541 cgctacgtgc tcatggtcga cggcgccgag acgcgcatgc acacgaccga gtttcgcgaa
      601 gtgatgacca agtggttcac ccagcacgac tcggcggtcg tgcacatgct gatcaagtca
      661 cgcatgctcg agatggcgct caacgtcgct aacctcatgg tcggcggtcg cgcgcgcgcc
      721 tacttcaatc ccgaggtctg ggaatccatc ggccggcagg aggtgccgtc cttcattcgg
      781 cggcctctcg tggtgccgtc ggacgtgaaa accggctgac cttggcgccg tctccgacgg
      841 ccgctcaact cgagggacgc tcggttggtc cgagcccgtt cggctccatc gtcgcccagg
      901 cgacaacgtc gtctttgacg agtagcgcga ggagcaccgt gagcgtcgtg aagaggacga
      961 cggtctcgaa atagaagtgc agcccgaggt ccggaatcag caccgtgaag tactgcccgg
     1021 cgcacatgaa gagcatggtc agccagacgc ccgcgtcgac gcgcgacgcg gggagtggct
     1081 cggcgtcggt cggccggcgt tcggtggcga gcatcggtaa gaggaacacg aagtgaatat
     1141 agtagttggc cgggtaggtg aggaccggca ccaggatcat gccgagcaac gcgccttggt
     1201 ccgcgcgccg gcgccgcgcc gctagcgcga cgagtccgac gtagagcagc gtcgcggcga
     1261 tgaagagcgg catgcggttg cggatcacgc tcgcctggtt gtcctcccag ccgccgatga
     1321 gtgatcgaag cgcgatcgaa gccgggtgac tgtcggccgc gagctgcgag atcttcctca
     1381 agcagtcggg ccacgcggcg ggcgagagta cggccgccga gatcacgaag gtgacgacga
     1441 ccgtcgccgc ggctccgagc agcatgcgca cggtgccgcg ctcgcgctcc atgagctcgc
     1501 gtaagcgggg catgcgccgt tcgcgcacga agttttcgct gatgcgcatg gccgccggca
     1561 gtgcggcgcc ggcgatcgag actgccggga agactcggat catggtcgag agcgcgagca
     1621 acgcgccccc gagcgcccag cgctccttct tgagcgcgca ggcgccgtag ccgaggtagg
     1681 cgagccagtc atgccgtagc gtcgcgccgc cccagttcgt cccgtacatg atgaagtcgt
     1741 tggcgccgaa caccgtcatc acgatcaagg cggtgcgcgg tccgtaacag cgccagaccg
     1801 cgaagaacat gcctccgagc agcgcgagat cgatgaagcc gagcagcgtg aaaccgaggt
     1861 tgctcggcgg cgtcgccgag aacagaaagt gcgcgatcgt catccagacg ggcgtcgcgt
     1921 tcccgccgaa atcgcagagc atctcgagcc agtgcgagtt gcccatggcg tcgcggaacc
     1981 agcgttcgtc ctccttgagc tcttcccaac gttcgggcgt aaaccgggat ttgatcgcct
     2041 tgatccgtgc ttcctgccgt tccggcgtgc tcatccgatg cgagtgcaga tcgcgcatcg
     2101 ggatgttctc gatcgactcc ttgcgctccg ggtgatcttc cagaaaggtc gcgacgtcgg
     2161 cctcgtagat gccgcggtag ccgagctcac ggaagtattt cgccgtcgtg tagtactgcc
     2221 gcaaatcgag gtagtgcgcg aacgtccact cgtcgcggcc tcgactgtaa aactgcggct
     2281 gcgcgaggtt atagaagcag acgacgccga ggacgcccgt gagcccgagc gtcgcgagaa
     2341 tgacggcgcg cacggcgggg aagcgcttgg gcgcgaacgc ttcgcgcgcg acggtgagcg
     2401 cggccgcgag ccccaccgtg ccgcgcacga gcgacacctc gcgcgggtcg attggtaggg
     2461 cgtccaagta agcgaccacg aagttgaaga tgccgatgcc cgccacgagc agcgcgagca
     2521 cgacgagaga cggcttcgcg ccgcggtaga gcagcagcgg cgccatcagt gaaagcccga
     2581 agagcaccgt ggcgtcgcgg aaatgcgcgt cgagcgagcc cgaacgcacc tccggcacat
     2641 tcccaggaaa ctcggccgga acgctcgaga aaagctcgag ctcggtcacg ccgaagaagc
     2701 cgtcgcccga tttcggatgc aggcggacgt agcgcgccgt cgcgtgcaga tccgtggtgc
     2761 tgcgcgttcg gagtcccgcc tggtgcacga cgggcgcgac ccacagtgtc tggaagtgct
     2821 cgccgtcgag cgagccctcg acctcgtagg tatcgttgtt gtcaccctga agccacgccc
     2881 ccgcgatggg cgtcggcttg cccagatcgt agacgacgta ggtgtcgcgc cccgcgagcg
     2941 gcacggtcgc caggctcttc cacgagtcgc cttcgcgacc gcggcgtcca tccgtgagtt
     3001 ggtcgagacg ccggtgtgcg tcgctgtgga tcgggcgcaa gcgaaagagt aggttcccgt
     3061 tggcggtgac gggcggagca tcgtcgctgt cggcgacggc gcgggagctc acgagcacca
     3121 aaaacactcc gagcagcgcg aaaaacgccc gcaagacctt cggcatgggc gccgtttttt
     3181 gcacgaccgg ccgacgagcg ccatagcggc gtgcgtcagc gcgcaatcga gggggcgtta
     3241 cgggggtgag gggtagtcgc gtgcgacgta gcaaagccct tcgccgccgt tcaagtgagc
     3301 ctgcgcgctc tgcacgtagg cgacgaaatc gcgatagtca cggaaagcgt cgcgcgggtt
     3361 gccgaccggg tccacgagtg tgtgcccgac gccgaaactc cgctggcggc cgagcggcag
     3421 ctccggggcg gcgtcactcg gacacacccg ccaggggagc gccgcgccgt gcacgtccgt
     3481 gaacgccgtt ggatcgaggc ccacgaggtc gtcggtcgtg agcgcggcgc cgtcgaaccg
     3541 ggcggcgagt tggtcgaaat agatagtcga atcgtgcacc gtgtccgaga agaacgggtg
     3601 ctcgaggtgc agcgtgatct gcgcgagcgc cggctgattc ggcaacagcg cgatgccacg
     3661 ctggtactct tcgccttcga acgccgtgcc ctgattttct tgattctgac aattgacgta
     3721 gctcgtcggc gttcggaagc cgagctcgaa cggcagcgcg gtcggcagcg cgctcacgtc
     3781 gtacgccggg tcgctcgtga cgcagtcttt gccggcgaac gtcgccgtgc ctgcgtagag
     3841 cacggtgaag ccttcgctga tcatgcgcgc gtagagcgct tccgccgccg catcagccgc
     3901 gaagtttacg cgcgccgcgc gcgtttcggc cggcacgagc cgatagccga acgcgtagcg
     3961 gcgatcggcg gcgaatggct tgtcgccgtc gaggttctcg cgggcgatcg tcgtgagcgg
     4021 cgtcgccgtg ccttgtccac cggcggccgg tacgccgcct tgcaccgcga gatccaccgc
     4081 ccatggcccc gcttcacgcg cgacggcggc gccggtttgg gcttgatcgg cgggagcctt
     4141 gtccgggttt tcggagagcg tcacgtcgcc caccgtcacg agcacgtggg aaaagtggag
     4201 ctcccagccg tcggcgaagg tcacgtcgct gcccttcgga aacgagaagc cctcggtcgc
     4261 ggcggcttcg cccgagattt gcacggcgac gctgccgccc ttgtccgctg cgttgccgca
     4321 ccccgcggtg ctcgacgcga cggccaatgc gacgagcgcg tgagcgctta cgtcgagctg
     4381 tcgtcgaaga cgaacgcgga tgcgccgggc gaacgtcatg gcgtgaagct gaacgaatag
     4441 acgccgctgc tcgcgcgcag gccaatgtac aggttcgtgc tcgcgggcgt cgccgtggcg
     4501 ggatcgtcgt cgaactggag cgtgccttcg gcgttcggct cgagctccgc gaaatccacg
     4561 ttcgcgaaca tcttggccgg ctcgaccgcg agcgtcagct gactgccgcg tgcgggggtc
     4621 acgtcgatgg gaatcggcga cacgatgcgt tccttgcaaa tgggtttgag tcccggttcg
     4681 gcgggcgggg tcggctgcag ccgattttcg ccgatcgtga gctgcccttc gaacgcctg
//
LOCUS       DATIML010001222         1693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2854814, whole genome shotgun sequence.
ACCESSION   DATIML010001222 DATIML010000000
VERSION     DATIML010001222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2854814"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VLJ38_21140"
     CDS             <1..470
                     /locus_tag="VLJ38_21140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42105.1"
                     /translation="APPVEGWRELFDALDNAKQERALAGETYAAMLRSLLERIASAEH
                     RVRELERVGLAAPITVSVEAARAPSAVVARELDEEDSSDDARSAGEARLFREIHARYQ
                     RLVGERQRDAPGLLADVEERLAELPDLDPGELADAAADLGALALLLGRRAHSG"
     gene            528..1526
                     /locus_tag="VLJ38_21145"
     CDS             528..1526
                     /locus_tag="VLJ38_21145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42106.1"
                     /translation="MAAFCGKRLGDFARTTGLLLAGLSLVLACSGSEFELVAPGRASV
                     LRASSALVAAASRSESGAEVHAGAAALREPRVETVTTGVSGEPNAASTESNAARLAAA
                     EPNVPQADVNAPQVDVNAPQADVNAPQANVNAPGTAPNDTSAEPFTPRELVATAREVI
                     VYAAPTRTAKRLGYLRLGARVQRAPLPASHDGCAQGFYRVAPEGYVCVGNAASLDEHE
                     PLAELARTRPDREAALPYVYGHSKPVPPPLYTHLPSTAETFALEGKAARVATGFGDLS
                     VRALPRELEHGGSLPMPFGYARPPSTDTPRAVTNSAFALLDSVEHDGRRFGITTDL"
BASE COUNT          244 a          584 c          607 g          258 t
ORIGIN      
        1 tcgctccgcc ggtcgagggt tggcgcgagc tgttcgatgc actcgacaac gccaagcaag
       61 agcgcgcgct cgccggcgag acctacgcgg cgatgctccg ttcactgctc gagcgcatcg
      121 cgtcggccga gcaccgcgtg cgcgagctcg agcgcgtagg cctcgcggcc cccatcacgg
      181 tgtcggtcga agctgctcgc gcgccttcgg ccgtggtcgc gcgcgaactc gacgaggagg
      241 actcgagcga cgacgcacgc tcggcgggtg aagcgcgcct gtttcgcgaa attcatgcgc
      301 gctaccagcg gctcgtgggc gaacgccaac gcgacgctcc cggccttctc gcagatgtgg
      361 aggagcgtct cgccgagttg ccggatctcg atccgggcga gcttgccgac gccgccgcgg
      421 atcttggagc gctggcgctg ctcttggggc ggcgcgcgca ttcgggctag ccgtccaaag
      481 cgccgaaaag ttggtccggc cgagtggcct gtggctagca gaagaggttg gcagcgtttt
      541 gtggcaagcg actgggtgac ttcgctcgaa cgacgggcct gctgctcgct ggtttgagct
      601 tggttttggc ctgctcgggc agcgagttcg agctcgtggc gccggggcga gcgtccgtcc
      661 tgcgggcgag ctcggcgctc gtcgctgccg cttccaggtc ggagtcgggc gcagaggtgc
      721 acgcgggggc cgcagctttg cgcgagccgc gcgtcgagac ggtgaccact ggcgtgagcg
      781 gggagccgaa cgcggcgtcg acggagtcga acgcggcgcg cttggcggca gcggagccga
      841 acgtgccgca agcggacgtg aacgcgccgc aagtggacgt gaacgcgccg caagcggacg
      901 tgaacgcgcc gcaagcgaac gtgaacgcgc cggggacggc gccgaacgat acgtcagcag
      961 agccgttcac tccgcgcgag ctcgtcgcga cggcgcgtga agtcatcgtc tatgcggcgc
     1021 cgacgcgtac tgcaaaaagg ctcggctacc tgcgactcgg tgcgcgggtg cagcgcgcac
     1081 cgctgccggc aagtcacgac ggctgcgcgc agggcttcta tcgcgtggcg cccgaaggct
     1141 acgtgtgcgt cggcaacgcg gcgagtctcg acgagcacga gccgctcgcc gagctcgcgc
     1201 gcacgcggcc ggatcgtgag gcggcgctgc cctatgttta cgggcactcg aagcccgtgc
     1261 cgccgccgct ctacacgcat ctgccgagca cggccgaaac gttcgcgctc gaaggaaagg
     1321 ccgcacgcgt cgcgactggt ttcggcgatc tctccgtgcg cgctttgccg cgggagctcg
     1381 aacacggcgg ctcgttgccg atgccgttcg gctacgcgcg cccgccgagc acggacacgc
     1441 cacgcgccgt gaccaacagt gctttcgcgc tgctcgacag cgtcgagcac gacggccgcc
     1501 gcttcggcat cacgacggat ctctagctcg tgccgctcga tcgcctgacg cgcgtcgagc
     1561 cgagcgcgtt ccacggcgtc gtgctcgacg actcgacgac gctgccgctc gtgttcgtcc
     1621 gctcacgcca cgccacgctc ttcgccggca gtcccgaaca cggctttcgc cccgcgcgcc
     1681 cgctcgcgta ccg
//
LOCUS       DATIML010001223         2703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2566578, whole genome shotgun sequence.
ACCESSION   DATIML010001223 DATIML010000000
VERSION     DATIML010001223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2566578"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1967
                     /locus_tag="VLJ38_21150"
     CDS             <1..1967
                     /locus_tag="VLJ38_21150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42107.1"
                     /translation="PAWGIHATVDVFPRLESVPADYWPVVLTRRHLGDDEGFHLTHDG
                     QPFSVVEAIAGWSLTASHEILEMLADPSGTRTIPTASPDPEAPFARVEFLVEICDPCQ
                     GADCAYTVNDVLVSDFVTPAFFEPPGRGQAGRQPDYSFRGNIEGPQRLAPGGAMTWLD
                     RALGHVVHVTRGDGDTLERTLLPASAGETRPLRAVVHAGTNNRRPAMRVGGIVNGLKA
                     SRKRLGAQTAMRARAELYRKELATLGRPEHVKLVTPTDADVKQRLDAALARAKALKES
                     GVKLEADLMELLTQAREQIDAPIVNPEDAFALDLVKSALRSPTAPTLLTARDVPGFAE
                     YDHEDIRWAKALVEYAFHRKAPFPVCPVRAEDSLVHPIADSAVIAMAGDWGTHDVSSR
                     NIGNAITALRPTHTIHLGDVYYAGTEDEERQFIREWPAGSAGTFALNSNHEMYAGGSA
                     YFGLALQSDKFDYQTYSYFALTSSSWLFIALDSAYQATAHGATPYDVGRLPANDPQLA
                     WLKRLLASKVAFDAGGARKRCCLLTHHQALETNGSESALYQDVKAALGGVPDLWYWGH
                     IHGAAVYQPRAVDGRTFRGRLIGHGGIPYISDFQPAADAAARIEWAERSVGDAKGVNG
                     FAVLRLAGAKLSEEFYDERGGLRYSTTIAP"
     gene            2140..>2703
                     /locus_tag="VLJ38_21155"
     CDS             2140..>2703
                     /locus_tag="VLJ38_21155"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSU42108.1"
                     /translation="MRFMVMHKLTAEMEREFPPDPALIANVGKLIEASVKEKIFVSGE
                     GLKPSSERVHIAYQDGKRTITDGPFTEAKELVAGYALMRVRSKEEAISWCDKFAALLG
                     NVELFLGPVVEPWDIGLAPKPANAPLRYLSMHKMDESCEKDTPPEPAMMAKMGRLIEE
                     MTKAGVLQATGGLASTKRGARIRFEGGK"
BASE COUNT          491 a          908 c          894 g          410 t
ORIGIN      
        1 cgccggcgtg ggggatccac gcaacggtcg acgtcttccc gcggctcgag agcgttccgg
       61 cggactactg gcccgtcgtg ctcacgcgtc gtcatctcgg cgacgacgag ggcttccatc
      121 tcacgcacga cggccagccg ttctcggtcg tcgaggccat cgccggctgg tcgctcaccg
      181 cgagccacga gatcctcgag atgctcgccg atccgagcgg cacgcgcacg atcccgacgg
      241 cctcgcccga tccggaggct ccgttcgcgc gcgtcgaatt tctggtcgaa atttgcgacc
      301 cctgccaagg cgccgattgc gcgtacacgg tgaacgacgt gctcgtttcc gacttcgtga
      361 caccggcgtt cttcgagccg ccggggcgag ggcaggcggg tcgccagccg gactattcgt
      421 tccgcggcaa tatcgagggc ccgcaacggc tcgcgcccgg cggcgccatg acctggctcg
      481 accgagcgct cggccacgtc gtgcacgtga cgcgtggcga cggcgacacg ctcgagcgca
      541 cgctcctgcc cgccagcgcg ggagaaacac ggccgcttcg cgccgtcgtg cacgccggca
      601 ccaacaaccg gcgacctgcg atgcgcgtgg gcggcatcgt caatgggctc aaagccagcc
      661 gaaaacgtct gggagctcag accgccatgc gcgctcgcgc cgagctctac cgcaaggagc
      721 tcgctaccct cggccgtccc gagcacgtga agctcgtcac gcccacagac gcggacgtga
      781 agcaacgact cgacgccgcg ctagcgcgcg cgaaggcgct caaggaaagc ggcgtcaagc
      841 tcgaagccga cctgatggag ctgctcactc aggcccgcga acaaatcgac gcgccgatcg
      901 tcaatccgga ggacgccttc gctctcgact tggtgaagag cgcgctgcgc tcgcccacgg
      961 cgcccacgct cttgaccgcc cgtgacgtgc cgggcttcgc cgaatacgac cacgaagaca
     1021 ttcgctgggc gaaggcactc gtcgagtacg cctttcatcg caaggcgccg tttcccgtct
     1081 gtcccgtgcg ggccgaagac tcactcgtcc atcctatcgc tgatagcgcc gtcatcgcca
     1141 tggccggtga ctggggcacg catgacgtgt cctctcgcaa catcggtaat gcaatcaccg
     1201 cgctccggcc cacgcacacc atccacctcg gtgacgtgta ttacgccggg accgaggacg
     1261 aagagcggca gttcatccgc gagtggcccg ctggttcggc gggcacgttc gcgctcaact
     1321 cgaatcacga gatgtatgcg ggtggttcgg cgtacttcgg cctcgcgctg cagagcgaca
     1381 aattcgacta ccaaacctac agttacttcg cgctcacgag ctcgagctgg ctcttcatcg
     1441 cgctcgactc cgcatatcaa gcgacggcgc acggggccac gccgtacgac gtaggtcgcc
     1501 tgccggcgaa cgacccgcaa ctggcgtggc tcaagcggct gctcgcgagc aaggtcgcct
     1561 tcgacgccgg cggcgcccgc aagcgctgct gcttgctcac gcaccatcag gctctcgaaa
     1621 cgaatggcag cgagtcggcg ctctatcaag acgtgaaggc ggcgctcggc ggcgtgcccg
     1681 atctttggta ctggggtcac atccacgggg ccgcggtcta tcaaccgcgc gccgtcgacg
     1741 gccggacgtt ccgcggcagg ctgatcgggc acggtggcat cccgtacatc tccgacttcc
     1801 agccggcagc ggacgcggcg gcccgcatcg aatgggcgga acggagcgtc ggtgacgcca
     1861 agggcgtgaa cggcttcgcc gtcctccggc tcgcgggcgc caagctgagc gaagagtttt
     1921 acgacgagcg cggcgggcta cgctactcga cgacgatagc gccatagggc ccgcgcggaa
     1981 gcgcgcggta gcccgtaagt acctgaaaag acgattattt cggtacgcgg ccgcgcccgc
     2041 gcccaaaaaa agttggcgcg cgtgtcgatc caggcgcggc tcggtcgtcg cccttacaga
     2101 gcgaggcacg gcgccgagcc aggaccgagg agaagcacga tgcgattcat ggtgatgcac
     2161 aagctgacgg ccgagatgga gcgggaattt cccccggacc cggcgctgat tgcgaacgtc
     2221 ggcaagctca tcgaggcgag cgtcaaggag aagatcttcg tctcgggcga gggtctcaag
     2281 ccgtcctccg aacgcgtgca tatcgcttac caagacggca aacgcacgat cacggatggc
     2341 ccgttcacgg aggcgaagga gctggtagcg ggttacgcgc tgatgcgggt gcgctcgaag
     2401 gaggaggcca tctcctggtg cgacaagttc gcggcgctgc tcggcaacgt cgagctcttc
     2461 ctggggcccg tcgtcgaacc gtgggacatc ggcttggcgc cgaagcctgc gaacgcgccg
     2521 cttaggtact tgtcgatgca caagatggac gagagctgcg aaaaggacac gccgcccgag
     2581 cccgcgatga tggcgaagat gggcaggctg atcgaggaaa tgacgaaagc cggcgtgctg
     2641 caggcgacag gcggactcgc gagcacgaag cgaggcgcgc gcatccgctt cgagggcggc
     2701 aaa
//
LOCUS       DATIML010001224         2604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5170970, whole genome shotgun sequence.
ACCESSION   DATIML010001224 DATIML010000000
VERSION     DATIML010001224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5170970"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..1024)
                     /locus_tag="VLJ38_21160"
     CDS             complement(131..1024)
                     /locus_tag="VLJ38_21160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSU42109.1"
                     /translation="MSENDEKTRVTQVVQAPPPDQGTGNDCVVVIYAAEPGLLGKRYV
                     LEKSPVRIGRGADNQIVLEGDSVSRRHCHFDRRQGTWHIVDDGSTNGTFLNEEQVKGF
                     AQLNNGDRVKVGPTILKYLSGLDAEAKYHEEIYRMTIVDGLTQIHNKRYLFEALDKEL
                     IRARRYDRQLSLLIFDIDYFKNINDQYGHLAGDHVLRELARIVQERIRRDEVFARYGG
                     EEFVIVLPETPLAGGVALAENLRGRVETHPFAFQGERIPVTISVGCAMLGEEKAAAEL
                     IQRADDKLYEAKRGGRNRVCS"
     gene            complement(1207..1692)
                     /locus_tag="VLJ38_21165"
     CDS             complement(1207..1692)
                     /locus_tag="VLJ38_21165"
                     /inference="COORDINATES: protein motif:HMM:NF017936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSU42110.1"
                     /translation="MQAQALIRTLGLTRHPEGGYYRETFRASALPFDLPGRGARSAST
                     AIYFLLEDGDFSAFHRVRSDEVWHFYAGAPLELHTLGAEQGHERVVLGPDFEHGERPQ
                     HVVLAGVYQAARLAAPGFALCGCTVAPGFDFADFELPGRAELAALFEAQRELVKLLTR
                     T"
     gene            complement(1703..>2604)
                     /locus_tag="VLJ38_21170"
     CDS             complement(1703..>2604)
                     /locus_tag="VLJ38_21170"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HSU42111.1"
                     /translation="GHQPSAVMAEFERILGWADLRYNGLVYPIVNILTLWDIHCTIAL
                     ERWRKRAGAALEGWFAVIGEMEALSSLAGLAHDEPDFAFPEVDAHEPPFVAEALGHPL
                     IPRSGRVKNDVALDTPGSALLVTGSNMSGKSTLLRAMGLAAVLAQAGAPVCARRLRFA
                     PAVIRTSLRISDSLERGVSHFYAEVKKLKLTLDATTGEERVFFLLDEILHGTNSRERQ
                     VGARWLLAELLRRGAAGAVSTHDEELCRLPPELMPRVRLVHFRETVKDDKMTFDYLLR
                     AGPVKAGNALRVMRLAGLDVPLE"
BASE COUNT          424 a          822 c          906 g          452 t
ORIGIN      
        1 cggccgcgtg gcgatgccgc aggagaaacg tgcgcgagtg ctcacccggc ggtcgtgtgg
       61 cgatgagcgg gagctcgtct ccggaagggg tcgagtcggg gtgcaaggtt cgagtcgagg
      121 gaggggcgtg ctacgagcag acgcggtttc ggccgccgcg cttggcctcg tagagcttgt
      181 cgtcggcgcg ctggatgagc tcggcggcgg ccttttcttc gccgagcatg gcgcagccga
      241 cgctgatcgt cacggggatg cgctcaccct ggaaggcgaa ggggtgcgtc tccacgcggc
      301 cgcgcagatt ctcggccagc gcgacgccgc ccgcgagcgg cgtctcgggc agcacgatca
      361 cgaactcctc gccaccgtag cgcgcgaaca cctcgtcgcg ccggatgcgt tcctgcacga
      421 tgcgcgcgag ctcgcgcagc acgtggtcgc ccgcgaggtg gccgtactgg tcgttgatgt
      481 tcttgaaata gtcgatgtcg aagatcaaga gcgagagctg gcgatcgtag cgtcgcgcgc
      541 ggatgagctc cttgtcgagc gcctcgaaca ggtagcgctt gttgtggatc tgggtgagcc
      601 cgtccacgat cgtcatgcgg taaatttctt cgtggtactt ggcttcggcg tccaagcccg
      661 acaggtactt caggatcgtg ggaccgacct tgacgcggtc gccgttgttc agctgcgcga
      721 agcccttcac ctgctcttcg ttcaagaacg tgccgttggt cgagccgtcg tcgacgatgt
      781 gccaggtgcc ctggcggcga tcgaaatggc agtgccggcg tgacaccgag tcgccctcga
      841 gtacgatttg attgtcggcg ccgcggccga tgcgcacggg gctcttctcg agcacgtagc
      901 gcttaccgag cagtccgggc tcggcggcgt aaatcacgac gacgcaatcg ttgccggtgc
      961 cctgatccgg cggcggagct tggaccacct gagtgacgcg cgttttttcg tcgttctcac
     1021 tcaccggtga cgccttgctc tcacgtggct gctccctggg gaaatggctc ccgccgcggg
     1081 cgcgcattgt ggcgactcat gttgaaccct acaaggtagc aaccggccgg atttacagtc
     1141 aagttgtagt cttttatggg gagaggtggg ctctcgcacc ttttcgtcga ttgaagcccg
     1201 ttccgactac gtccgcgtga gtagtttgac gagctcgcgc tgcgcctcga agagcgccgc
     1261 gagctcggcg cggcccggca gctcgaaatc ggcgaagtcg aagccgggcg cgacggtgca
     1321 accgcagagc gcaaaaccgg gcgcagcgag gcgcgccgcc tggtagacgc cggctaaaac
     1381 gacgtgttgc ggccgctcgc cgtgctcgaa gtcggggccg agcacgaccc gctcgtgacc
     1441 ctgctcggcg cccagcgtgt gcagctcgag cggcgcgcca gcgtaaaagt gccagacctc
     1501 gtccgagcgc acgcgatgga atgccgaaaa atcgccgtcc tcgagcaaaa agtagatggc
     1561 ggtcgaggcg ctgcgcgcgc cgcgtccggg caggtcgaac ggcaacgcgc tcgcgcggaa
     1621 cgtctcccga tagtagccgc cctccggatg acgcgtgagg ccgagtgtcc ggatgagcgc
     1681 ttgggcctgc atgttgctga gcctactcga gtggaacgtc gagccccgcg agccgcatga
     1741 ccctgagtgc gttgcccgcc ttcaccggtc ctgctctcaa gaggtaatcg aaggtcatct
     1801 tgtcgtcctt gaccgtctct cggaagtgca cgagtcggac gcgtggcatg agctcgggtg
     1861 gcaggcggca gagctcttcg tcgtgagtcg agacggcacc ggcggcgccg cggcgcagga
     1921 gctcggcgag cagccagcgc gctcccacct gacgttccct ggaattggtg ccgtgcagga
     1981 tctcgtcgag caagaagaag acacgctctt cacccgtcgt cgcgtcgagc gtgagcttga
     2041 gcttcttcac ctcggcgtaa aaatggctca cgccgcgctc gagcgaatcg gagatgcgaa
     2101 ggctcgtgcg gatcaccgcg ggggcgaagc gcagccggcg cgcgcaaacc ggtgcgcccg
     2161 cttgcgccag cacggccgcg agccccatgg cgcggagcag cgtgctcttg cccgacatgt
     2221 tcgagcccgt gacgagtaaa gcgctgcccg gcgtgtcgag cgcgacgtcg ttcttcacgc
     2281 ggcccgagcg cgggatcagc gggtgaccca gcgcctcggc cacgaacggc ggctcatggg
     2341 cgtccacttc ggggaacgcg aagtcgggct cgtcgtgcgc gagccccgcg agcgaggaga
     2401 gcgcttccat ttccccgatc acggcgaacc agccctcgag cgcggcgcct gcccgcttgc
     2461 gccagcgctc gagcgcgatg gtgcaatgaa tgtcccacag cgtgagaatg ttcacgatgg
     2521 gatagacgag gccgttatag cggaggtcgg cccagccgag gatgcgctcg aattcggcca
     2581 tcacggcgga gggctgatgt cctc
//
LOCUS       DATIML010001225         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4300319, whole genome shotgun sequence.
ACCESSION   DATIML010001225 DATIML010000000
VERSION     DATIML010001225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4300319"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            318..515
                     /locus_tag="VLJ38_21175"
     CDS             318..515
                     /locus_tag="VLJ38_21175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42112.1"
                     /translation="MVALFVITVGLFGLALVAGSTLLAFMALLGGLVVAFVLATAWMR
                     PTSYPAEHHPKIDRVFDDTAP"
     gene            693..1586
                     /gene="sigJ"
                     /locus_tag="VLJ38_21180"
     CDS             693..1586
                     /gene="sigJ"
                     /locus_tag="VLJ38_21180"
                     /inference="COORDINATES: protein motif:HMM:NF007214.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigJ"
                     /protein_id="HSU42113.1"
                     /translation="MPTNAVVTTDTFTRHRSRLFALAYRMLGTASDAEDVLQEAHLRF
                     SEQSAQVQYPKRWLEQVVTRLCLDQLRSARARREEYVGPWLPEPLETEGATLQGEPVD
                     PASISLAFLMLLERLSPLERAVFVLVESFEYSAEEAATALGREPAAVRQLLHRARAHV
                     REAKPRFAPSREAHLAMLGAFFAAVQTGDVKKVESLLAEDARAVLDGGGQAKTALNVV
                     HGADRVARLYIGLSKKVDTTLPYEVREVNGWPSLVIFRARAVMSVTQIETDGHEVFGI
                     SVCMNPAKLAAMSQKREPPRP"
BASE COUNT          254 a          508 c          546 g          292 t
ORIGIN      
        1 gaagtggtgg ccgtcatcgg tgcactcttg ccggcggcgg cgtcgctcga cgtggtgacg
       61 gagcgggcgc tcgcgttgca gcgcgccgtg ctcgatgcgc ggtgagttcg tgacgcggtg
      121 agttcgggac gcggtgagtt gagagctcgt acttcgaagt tcggattcgc gggcgtgagg
      181 gcgaggcaaa atgggtacac tcgttgccga atgccacggc aaagctgtcg tgcggggtcc
      241 agggcgggcc gaggcccgac ggctggtggc atgcgcaatg caccatcaga ttcatcatgt
      301 ggcgacactc aacagcaatg gtcgcgttgt tcgtgatcac cgtgggcttg ttcgggctgg
      361 cgctcgtggc cggttccacg ctgctcgcgt tcatggcgct cttgggcggg ctcgtcgtcg
      421 cgttcgtgct ggcaacggct tggatgcgcc ccacgagtta tccagccgag caccatccga
      481 agatcgatcg cgtgttcgac gacacggcgc cgtaacatcg cggcgccgcg cctggcccaa
      541 gctcacgctc ggcggccgtt cgagtgtcaa ggacaatccc gttcctgtgc cgcgagcgtc
      601 tgcgcgcgtt aggacggcca ggaaagcgcc ttcggttggt ctcgccgtgt ttgagattca
      661 aatacggcct gcgctgcgac taaatgcgcg cgatgcccac gaacgcggtc gtgacgacgg
      721 acacgtttac ccggcatcgt tcgcggctct tcgcgctcgc ctatcggatg ctcggcaccg
      781 cgagcgacgc ggaggacgtt ctccaggaag cccatctgcg cttctccgaa cagagcgccc
      841 aagtgcagta tcccaagcgc tggctcgagc aggtggtcac acggctctgc ctcgaccagc
      901 tcaggtcggc acgcgcgcga cgcgaagagt acgtcggtcc gtggcttccc gagccgctcg
      961 agacggaggg cgcgaccctg cagggagagc ccgtcgatcc cgcatccatc tcgctggcgt
     1021 ttctcatgct actcgagcga ctctcgccgc tcgagcgtgc ggtcttcgtg ctggtcgaga
     1081 gcttcgagta ctccgcggag gaagcagcga cggccctcgg gagagaaccg gcggcggtgc
     1141 gccagctcct gcatcgcgcc cgcgcccacg tgcgggaggc gaagccgcgc tttgctccct
     1201 cccgcgaggc gcacttggcg atgttgggtg ctttcttcgc cgccgtgcag accggtgacg
     1261 tgaagaaagt ggaatcgtta ctcgccgagg acgcgcgcgc cgtgctggac ggcggcggcc
     1321 aggcgaagac ggcgctcaat gtcgtacacg gcgcggaccg cgtcgcgcgg ctgtacatcg
     1381 gcctctcgaa aaaggtcgac accacgcttc cctacgaggt tcgcgaggtc aatggctggc
     1441 cctcgctcgt tattttccga gctcgcgcgg tcatgagcgt tacgcaaatc gagacggacg
     1501 gccacgaggt gttcggcatc tcggtgtgca tgaaccccgc caagctcgcg gccatgtcac
     1561 aaaaacgaga gccgcctcgt ccctgacgcc atggttgagc
//
LOCUS       DATIML010001226         2715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4880421, whole genome shotgun sequence.
ACCESSION   DATIML010001226 DATIML010000000
VERSION     DATIML010001226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4880421"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(348..773)
                     /locus_tag="VLJ38_21185"
     CDS             complement(348..773)
                     /locus_tag="VLJ38_21185"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HSU42114.1"
                     /translation="MKFTLNSAGGVASRVTLGSHELVFDQPSAVPGGTDRGPSPLDVL
                     AVAVGACAHYYAAAFLTARQMPTDGLTVEIEAEKSRQPVTRLGTFLIHVKLPAGVSLQ
                     HLPAIERAIRHCPAYGTLVHPPDVTLVVSPHEGEKARVA"
     gene            complement(1046..1498)
                     /locus_tag="VLJ38_21190"
     CDS             complement(1046..1498)
                     /locus_tag="VLJ38_21190"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSU42115.1"
                     /translation="MTAIRHILVPSDFSEPSRAALEYAADLGRAFDATVDVLHVWEAP
                     AFIPPASLLDAGVADLSLVEIFRKNAEDGLSQFVEDAKKRGVAVRASFTELGAPARVI
                     TEFARKREYDLIVVGTHGRTGLSHALIGSVAERVVRHASCPVLAVRGR"
     gene            1853..2512
                     /locus_tag="VLJ38_21195"
     CDS             1853..2512
                     /locus_tag="VLJ38_21195"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU42116.1"
                     /translation="MGEVDVRALDGVDFELRAGEFLVLLGPSGSGKSTLLNILGGLDV
                     PSEGRVFFGSEELTDADDDQLTAYRRHHVGFVFQFYNLVPSLTARENVALVTDIADDP
                     LDPEEALGLVGLAERLDHFPTQLSGGEQQRVAIARAIAKRPSVLLCDEPTGALDFRTG
                     ILVLDVLDRINRELGTATAVITHNAPIAAAADRVVTLGDGRVYGSRTNATRARASELR
                     W"
     gene            2517..>2715
                     /locus_tag="VLJ38_21200"
     CDS             2517..>2715
                     /locus_tag="VLJ38_21200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42117.1"
                     /translation="MWLNALNRKLLRETATLKGQIATIAVVLASGIVCFIALRGTYAS
                     LLASELDYYDRFRFADVFAQAE"
BASE COUNT          425 a          895 c          928 g          467 t
ORIGIN      
        1 atctggacgt aatccgcccc gagcgccttg gcctgctcgc gcaggttcgc gctggcgccc
       61 tcgtacgtgc cgacatgggt gaagagcccg cagccttggc cgtcggtcgc acgcagtcct
      121 cgcaacggtc gtgatcccgg cgccggcggc gctttgtcga tgcgaatggc gtccgcgctg
      181 gccgcctggg ggacgctgcc cgcgcaagca ccgaggctta gcccaagcaa gctggcaacg
      241 agagacggag agcgcccgag gtgcatgcgc cactacctta gcgctgaccg cgatctttta
      301 ctgctgcgag cgcgctgcac gtgctgcgag cgcgctgcac gcgtcgctca tgcgacgcgt
      361 gctttttcgc cctcgtgggg tgaaaccacc agcgtcacgt ccggaggatg cacgagggtg
      421 ccataggccg gacagtgccg gatggcgcgc tcgatcgccg gcagatgttg gagcgagacg
      481 cctgccggca gcttcacgtg aatgaggaac gtgccgaggc gcgtgacggg ttgacgcgac
      541 ttttcagctt cgatttcgac cgtgagcccg tcggtgggca tttgtcgggc cgtgaggaat
      601 gcggccgcgt aatagtgcgc gcaagctccg acggcgaccg cgagcacgtc cagtggcgag
      661 ggaccgcgat cggtgccgcc cggaaccgcg ctgggctggt cgaacacgag ctcgtgggag
      721 cccagcgtga cgcggcttgc aacgccgccg gcggaattga gggtgaactt catggctgct
      781 tgcctttctc gcgcccgagc caggaccaaa agcctgtggc ccgcgcgctg ccggatttgg
      841 gggcagcggc tttcttctcc cggcaacggc agcgatctgc caccgggacg tcgccgagca
      901 cggcttcgat gtggcggccg cagccggcgt acgtcggttt gccgcagcta gaacaggtga
      961 ttcgctggca catggctctc gtggtcctct cttcttggag ccagctgcaa gtcaaaaggg
     1021 ttcgggaaac gaagcaggag cctgcctacc gcccccgtac cgccaacact ggacaagacg
     1081 cgtgacgcac gacccgctcg gcgacgcttc cgatcaacgc gtgtgagagc ccggttcggc
     1141 cgtgcgtgcc gacgacgatg aggtcgtact cgcgtttgcg tgcaaattcc gtgatgacgc
     1201 gggcgggcgc gccgagctcc gtgaaggagg cgcgcacggc gacgccccgt ttcttggcgt
     1261 cttcgacgaa ctggctcaac ccgtcctcgg cgttcttgcg aaagatctcg acgagggaga
     1321 gatcggcgac gcccgcgtcg agcaggctcg ccggcgggat gaacgccggc gcctcccaga
     1381 cgtgcaagac gtcgacggtt gcgtcgaacg cgcgcccgag gtccgccgca tactcgagcg
     1441 ccgcccgcga tggctcggag aagtccgaag ggacgaggat gtgacgaatc gccgtcatgc
     1501 ggggtcgatg tgcatgtcac atgccgcgtc agtcttgggt gcgtggcacc gccacgaata
     1561 ccggtgaaga gcgggaacag gcgagctgcg cgttgccgtt gccgagcgct ggttcgcaca
     1621 cacgcgctcg agacgcgcag aattttccag gggactcggc tcgggcgcag cttctgcgga
     1681 ctagcggcga gaagctgcgc ttcgcggccc gtcgcgcgct ggtacgcatg ttgcgaacgg
     1741 gcgggcgatg gttcgcgctc gagacgactc tgtcgctgtc cccgttccgg cggctcgcgc
     1801 gccggcaggc agcgcagttt tagcgtgcgt cgggttgcgc aaagtctatc gcatgggcga
     1861 ggtcgacgtg cgcgcgctcg acggcgtgga cttcgagctc cgcgccggcg agttcctcgt
     1921 gctcttggga ccgtccggca gcggcaaatc cacgctgctc aacatcctcg gtggtctcga
     1981 cgtcccgagc gaaggtcgcg tcttcttcgg ctcggaagag ctcacggacg ccgacgatga
     2041 ccagctcacc gcctaccggc gtcatcacgt cggcttcgtc ttccagtttt acaacctggt
     2101 cccgagcttg accgcgcgcg agaacgtcgc gctcgtcacg gacatcgccg acgatccact
     2161 cgaccccgag gaggcgttgg ggctcgtggg tctcgccgaa cggctcgacc acttcccgac
     2221 gcaactttcc ggcggcgaac agcagcgcgt cgccatcgcc cgtgcgatcg cgaagcgccc
     2281 gtccgtgctc ttgtgcgacg agccgacggg tgcgctcgac tttcgtacgg gtattctcgt
     2341 gctcgacgtg ctcgatcgca tcaaccgcga gctcggcacg gcgacggccg tcatcacgca
     2401 caacgcgccg atcgcggccg cggccgatcg cgtcgtgacg ctgggtgacg ggcgcgtgta
     2461 cgggtcgcgc acgaacgcga cgcgcgctcg cgcgagcgaa ctgcgctggt gatgcgatgt
     2521 ggctcaatgc cttgaaccgc aagctcttgc gtgagacggc gacgctcaag ggccaaatcg
     2581 cgacgatcgc cgtcgtcctc gcgagcggca tcgtgtgctt catcgctttg cgaggaacgt
     2641 acgcctcgct cctcgcgtcc gagctcgact actacgatcg cttccgcttc gccgacgtct
     2701 tcgctcaagc cgagc
//
LOCUS       DATIML010001227         2358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3145159, whole genome shotgun sequence.
ACCESSION   DATIML010001227 DATIML010000000
VERSION     DATIML010001227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3145159"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VLJ38_21205"
     CDS             complement(<1..459)
                     /locus_tag="VLJ38_21205"
                     /inference="COORDINATES: protein motif:HMM:NF022273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2760 domain-containing protein"
                     /protein_id="HSU42118.1"
                     /translation="MNANVSPLPFSTRLWFAWVCLFRVLFDGVFAGRVRALDIPQADE
                     NVSDTAERDLTARATTEPDVTDAAPSNDAALQLLALLQREGRLIDFLQQDVTAFPDAD
                     IGAAARVVHDGCKKALAAHFDIKPVRGEREGGPVTLEVVEPNAVKLVGNVS"
     gene            complement(475..1458)
                     /locus_tag="VLJ38_21210"
     CDS             complement(475..1458)
                     /locus_tag="VLJ38_21210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42119.1"
                     /translation="MPTFLTTPKMSPELALRVQASVKGRRAAPGGRSRAPHLIVLVRL
                     AVLLLTGTLFATVIYVRNRERAERESERATLAADVARRRAALDPQDQRTLALVEGWLV
                     RGAGQYEGDAVAASLRAPGALPALFSGGAVYVRGEQAAFRNAAAVAEAAKSSSKDAFL
                     LCLLEPPAERVERALLVKARLVYSRRGELEALTEHVRPLRDAVVGLPFLSAAFAERVR
                     VANDLAELQRLRSAFGKAPLDAAIQAAKARVLLFVIDEPSPPGGPVELDGEKAHEVRV
                     GIVDLISQSTLLRLRKRVDPAWISAARRVDSANALDSCALALDVQESIMKL"
     gene            complement(1462..>2358)
                     /locus_tag="VLJ38_21215"
     CDS             complement(1462..>2358)
                     /locus_tag="VLJ38_21215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein"
                     /protein_id="HSU42120.1"
                     /translation="ARAELFLRGFSFSSGEVMARLILAVFDGLEPMFPSFVALLGDLE
                     FYLGALGFADFAASAGLTVCLPDFVAAEEPRVLTGLFNPLLLAHGIPPVPCDITTNRH
                     DTTVLVTGPNSGGKTRLLQSVALAQLLGQAGVFVPARVAMLTLASSLVVSLIQETKAD
                     QAEGRLGMELVRIRALFEHLPPGAMVMLDELCSGTNPSEGEEIFELVVQMLTRLRPQA
                     FITTHFLAFAGRLESEGAIPELRFLQVSLGDNHEPTYQFKPGVAKTSLAGHAAARLGV
                     TGEQLLALVERNTRALAAKRGG"
BASE COUNT          422 a          836 c          760 g          340 t
ORIGIN      
        1 actcacgtta ccgacgagtt tcaccgcgtt cggttcgacg acttcgagcg tcacggggcc
       61 gccttcgcgc tcgccgcgca cgggtttgat gtcgaagtgc gccgccagcg ctttcttgca
      121 gccgtcatgc acgacgcgcg ccgcggcgcc gatgtccgcg tcggggaagg ccgtcacgtc
      181 ttgttgcaaa aaatcgatca agcgcccttc gcgctggagc aaggcgagca gctggagcgc
      241 ggcgtcgttc gagggcgcgg cgtcggtcac gtcgggttcg gtcgtcgctc gtgccgtcag
      301 gtctcgctcc gccgtatcgc tgacgttctc gtcggcctga gggatgtcga gcgcgcgcac
      361 gcggccggcg aagacgccat cgaagagcac gcgaaagagg cacacccaag cgaaccacag
      421 gcgcgtggag aaggggaggg gcgagacgtt ggcgttcacg gcgccgagtc taacctagag
      481 cttcatgatg ctctcctgca catcgagcgc gagcgcgcag gaatcgagcg cattcgccga
      541 gtcaacccgc ctcgccgcgc tgatccaagc cggatcgacc cgttttctca agcgcagcag
      601 cgtgctttgg ctgatgaggt cgacgatgcc gacccgcacc tcatgcgcct tctcgccgtc
      661 gagctcgacg ggaccgcccg gggggctcgg ctcatcgatc acgaagagca agacgcgggc
      721 cttggcggcc tgaatggccg catcgagtgg cgccttgccg aacgcactcc gcaaacgctg
      781 gagctcggcg aggtcgttcg ccacgcgcac acgctccgcg aacgccgcgg acaagaacgg
      841 cagccccacc actgcgtccc tcagcgggcg cacgtgctcg gtcagcgctt cgagctcacc
      901 gcgcctcgag tacacgagtc gcgccttgac gaggagcgcc cgttcgacac gctctgcggg
      961 aggctcgagc aagcacagga ggaatgcgtc cttggacgag ctcttcgccg cctccgcgac
     1021 tgccgccgca ttcctgaaag ccgcctgctc gccacgcacg tacacggcac cgcccgagaa
     1081 caacgccggg agcgccccgg gagcacgcag cgaagccgcc acagcgtcgc cctcgtactg
     1141 accggcgccg cgcacgagcc agccctccac gagagcgagg gtccgctgat cctgcgggtc
     1201 cagcgcggca cgccggcgcg cgacgtccgc ggcgagcgtc gcgcgttcgc tctctcgctc
     1261 ggcgcgctcg cggttgcgaa cgtaaatgac cgtagcgaac aacgtgcccg tgagcagcag
     1321 gaccgcgagg cgcaccagca cgatgagatg cggagcacgg ctccggcctc ccggagcggc
     1381 gcgacgaccc ttgacgctcg cctgcacgcg cagagcgagc tcgggcgaca tcttcggcgt
     1441 cgtcaggaac gtcggcatcg ctcagccccc gcgtttcgcc gcgagggccc gcgtattgcg
     1501 ctcgacgaga gcgagcagct gctcacccgt gactccgagg cgcgctgcgg cgtgccccgc
     1561 gagcgacgtc ttcgcgacgc ccggtttgaa ctgataggtc ggctcgtgat tatccccgag
     1621 cgacacctgc aagaaccgaa gctccggtat cgcaccctcg ctctcgagcc tgccggcaaa
     1681 tgccagaaag tgcgtcgtga tgaaggcttg cggtcgcagc cgcgtcagca tttgcaccac
     1741 gagctcgaaa atctcctccc cctccgaggg attggtcccg gagcacagct catcgagcat
     1801 caccatcgca cccggcggca aatgctcgaa tagcgcgcga atgcgcacga gctccatgcc
     1861 gagccgtccc tcggcctgat ccgccttcgt ctcctggatc agcgagacca cgagcgacga
     1921 cgccagcgtc agcatcgcca cgcgcgcggg cacgaacaca cccgcctgcc cgagcaactg
     1981 cgcgagcgct acggattgta gcaagcgcgt ctttccgccc gagttcggtc cggtcacgag
     2041 cacggtcgta tcgtgacggt tggtcgtgat gtcgcacgga acgggcggga tcccgtgcgc
     2101 cagcagcagc ggattgaaga gccccgtgag tacgcgcggc tcttcggcgg ccacgaagtc
     2161 gggcaagcac accgtgagcc cggcgctcgc ggcaaagtcc gcgaagccga gcgccccgag
     2221 gtaaaattcg agatcgccca gcagcgccac gaagctcgga aacatcggct cgagcccgtc
     2281 gaacaccgcg aggatcagcc gtgccatcac ctcgccgcta ctgaacgaaa aaccacgcaa
     2341 gaacagctcc gcacgcgc
//
LOCUS       DATIML010001228         1904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5460993, whole genome shotgun sequence.
ACCESSION   DATIML010001228 DATIML010000000
VERSION     DATIML010001228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5460993"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VLJ38_21220"
     CDS             complement(<1..524)
                     /locus_tag="VLJ38_21220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42121.1"
                     /translation="MTAFVGARRALGVAHALAAAFGCALVTSPAAASPELDFGFGARS
                     QALAGSGVALADDAAAVFQNPAGLVRAQGVELSFSYAFVNYALAANGAPSGLPNVNAF
                     EGGLVVPGSIRGVPVAFGFSMALPDGRLSRLHQADPSEPYWPLDDAGPRLVDVGTGFA
                     ARPLRQLTLGAGVG"
     gene            complement(521..1789)
                     /locus_tag="VLJ38_21225"
     CDS             complement(521..1789)
                     /locus_tag="VLJ38_21225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42122.1"
                     /translation="MGRRARLGALVLAGSSLLGAGARATPSAVFGAGPRGIALTGGGT
                     SLPLGPESVLVNPAELAFEPSPSLLIGLRASDYSLSYDAGGTPHAYPAELSKGLVIGV
                     SAPLVRPSKDGFHAALGLFAETPPDFLVRAHLPLAEEPSFPLLVGRASALNLAVGLGG
                     GYGPFAFGAGLEVLATLSGRDVVASAAGAPSGVSDELLPAFGASVGGSLDLGAAGRVG
                     LAFRSTLRADFDVDVAPTSLAGVVSIAPLNVQGIAQYEPLKFDAEYSRDFGPYNLVLG
                     ARYEHWAAFPGWLAATIDCPPGVPCGTPLPPPAGYHDVIVPRAGIERSFDARSVSFTA
                     RLGYSFVPSAIPEQRGSSNTFDAARHALGVGYRVRLTRYLPLDLDGAWRFDFLADRGH
                     HKDDPTGPLGPEVTTHGKIVTWSFGVRLGL"
BASE COUNT          334 a          674 c          690 g          206 t
ORIGIN      
        1 aagccgacgc cagccccgag cgtgagctgt cgcaaggggc gcgccgcaaa ccccgtccct
       61 acgtcgacga ggcgcggacc cgcgtcgtcg agcggccaat agggctcgct cggatccgcc
      121 tggtgcaacc gcgagagccg cccgtccggc agcgccatcg aaaacccaaa cgccacgggc
      181 acgcctcgaa tcgaacccgg tacgacgagg cccccctcga acgcgttcac gttgggcagg
      241 ccggacggag caccattggc tgcgagcgcg tagttgacga aggcgtagct gaagctgagc
      301 tcgacgccct gcgcgcgcac gaggcccgcc gggttctgaa ataccgccgc ggcatcgtcg
      361 gccaaggcga cgccggagcc agcgagcgcc tgcgagcgcg ccccgaaacc gaagtcgagc
      421 tcgggactgg cagcggccgg tgacgtgacg agcgcgcaac cgaacgccgc agcgagggca
      481 tgagcgacgc ccagcgcccg gcgcgcgccg acgaacgccg tcatagtccg agcctcacgc
      541 cgaacgacca ggtgacgatt ttgccgtggg tcgtcacctc gggaccgagc ggccccgtgg
      601 ggtcgtcctt gtggtggccg cgatcggcga ggaaatcgaa gcgccaggcg ccgtccaaat
      661 cgagcggcag gtagcgcgtg aggcggacgc gataaccgac gccgagcgcg tgccgagcgg
      721 cgtcgaaggt gttcgagctc ccgcgctgct ccgggatcgc gctcggcacg aagctatagc
      781 cgagccgcgc cgtgaagctg acggagcggg cgtcgaagct gcgctcgatg ccggcccggg
      841 gcacgatcac gtcgtggtag ccggcggggg gcggcagcgg cgtgccgcac ggcacgccgg
      901 gcggacagtc gatggtcgct gccagccagc cgggaaacgc agcccagtgt tcgtagcgcg
      961 cgccgagcac gagattgtag gggccgaagt cacgcgagta ttcggcgtcg aatttgagcg
     1021 gctcgtactg cgcgatgcct tgcacgttga gcggcgcgat gctgacgacc ccggcgaggc
     1081 tcgtcggcgc cacgtccacg tcgaagtcgg cgcgcagcgt gctacgaaaa gcgagaccga
     1141 cacgcccggc cgccccgaga tccagactgc cgccgaccga ggccccgaac gccggcaaga
     1201 gctcgtcact cacgccgctc ggcgcgccgg cagcgctcgc gaccacgtcg cgtccgctga
     1261 gcgtcgcgag cacctcgagg cccgcgccga aggcgaaggg gccgtagccg ccaccaagcc
     1321 cgacggcgag attcagcgcg ctcgcgcggc cgacgagcag cggaaagctc ggctcttccg
     1381 cgagcggcaa gtgcgcgcgc acgagaaagt ccggcggcgt ctcggcgaag agcccgagcg
     1441 cggcatgaaa gccgtccttt gacggccgca cgagcggagc cgaaacaccg atgacgagcc
     1501 ccttcgagag ctccgcgggg taggcgtgcg gcgtgccgcc cgcgtcgtac gacagggaat
     1561 agtcgctcgc gcgcagcccg atgagcaggc tcggcgaagg ctcgaaggcg agctcagccg
     1621 ggttcacgag caccgattcc ggcccgagcg gcaaggaggt gccaccgccc gtgagcgcga
     1681 tgccgcgggg gccggcgccg aaaaccgccg agggcgtggc ccgagcgccc gcgccgagca
     1741 ggctcgaacc ggcgagcacg agcgcgccga gccgtgctcg ccttcccacc aacaaaaatc
     1801 gacgcctctg cctggtcacg gggcgcggcg aggctagcat gcgcgcccgc ccgcccggcg
     1861 ccctcgtcac gggtccggca atcgagaacg catgcgcttc ggaa
//
LOCUS       DATIML010001229         4295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4881121, whole genome shotgun sequence.
ACCESSION   DATIML010001229 DATIML010000000
VERSION     DATIML010001229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4295
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4881121"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1808
                     /locus_tag="VLJ38_21230"
     CDS             <1..1808
                     /locus_tag="VLJ38_21230"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU42123.1"
                     /translation="STASPHVHPLARLLGHARGRRRDLVLATVYSVLNKFFDVLPEVL
                     IGVAVDVVVNRKASFLARFGVVEPHRQLLVLGALTVLIWVLESLFEYLYVVRWRNLAQ
                     NLQHVMRMGAYAHVQKLELAWFERNRTGNLMSILNDDINQMERFLNGGANDLIQVVTG
                     SFLVGAVFFALTTKIALLALLPIPLIIYGAFWFQRRLAPRYALVRQRAGALNTRLANN
                     LLGIATIKAFTAEEFELSHVAADSDAYRSANTLAIRFSAAITPVIRMAILAGFTVTLL
                     YGGFLALRGEIGVGSYSVLVYLTQRLLWPLTRLADMTDLYQRSVASIERVVDLLDTPI
                     AIGATGAPLLPSAVRGELRFEHVTFAYGDEPILEDLTLTIAPGTTVAFVGGTGGGKST
                     IVKLLLRFYEPEHGTIRLDGAPLSGIALADLRRVIGYVAQDTFLADATVAENIAYGRE
                     DAPRAAVIAAAEAAEARDFIEALPEGYETPVGERGMKLSGGQRQRIALARAILKDPRI
                     LVLDEATSAVDNETEAAIQRSLERLVVGRTSLIIAHRLSTVRHADCIHVVERGRIVES
                     GTHAELVARGGVYAALWRLQTGEGQTDALETRGRC"
     gene            1826..4003
                     /locus_tag="VLJ38_21235"
     CDS             1826..4003
                     /locus_tag="VLJ38_21235"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HSU42124.1"
                     /translation="MRFGFGSELAVVLVLAAACGSHVTHADDDGAHGGRAQGGSGANE
                     AASGGQAGVMPSAGDSSAPLGVLDLSGLDASALAYPAPPGVDAARASAETIVARMTLT
                     ETATLLYGGAGGIIGGTSAAGPIPALSYDDGPGGVAHVSGATAFPDPITLAATWDRDL
                     VERWAEAMGAEERAKGVAVQLGPMLNLSRVPLAGRNFESFGEDPYLSAELAFADVRGI
                     QSNHIVATAKHFVGNEQETNRTSEDSRIDERTLHEVYYLPFEASVSAGVGSVMCSYNK
                     VNGLYACENPDTLGDLKGTLGFSGWVMTDWGAAHGSGAAAAGLDQEMPSASYFTASSL
                     AGTRVDDMATRLVTSLVRVGVLDDPPTGVSYADVTSAEHTALAREAASVGTTLLKDDA
                     HALPFGNDVKSIIVLGAAGGDTPYSTGAGSGEVTAAHVTSPLEAITARAPAGTSVTYV
                     RGDVESDASAAAADADAAVIVVAVASGEFLDRQSLSLDAESDALISAVAAVNPRTIVV
                     LDVPGAVMMPWLDAVSGVVVAWYPGQENGNALAALLFGDVNPSGKLPVSFPSAATDLP
                     APGPGTSVLYSEGLALGYRGLDSAGLDPLFEFGFGLSYTTFAYDGLELRSGEKPGSVD
                     VSFQLTNTGTFAGCEVAQVYVSFPPKAGEPPRVLRGFERVELEPGEARRVHIELPARA
                     FSCWSATAHARYVPSGSYTVSVGSSSRRLPLAASFEVVGVGEP"
BASE COUNT          644 a         1470 c         1446 g          735 t
ORIGIN      
        1 cctccaccgc cagcccgcac gtccatccgc tcgcgcggct gctcgggcat gcgcggggcc
       61 ggcgcaggga tctcgtgctg gcgacggtct actcggttct gaacaagttc ttcgacgtgc
      121 tgcccgaggt gctgattggc gtcgccgtcg atgtcgtcgt caatcgcaag gcgtcgtttc
      181 tggcgcgctt cggtgtggtc gagccgcacc ggcagctgct cgtgctcggc gcgctcaccg
      241 tgctcatctg ggtgctcgag tcgctgttcg aatacctgta cgtggtgcgc tggcggaatc
      301 tcgcgcaaaa cctgcagcac gtgatgcgga tgggagccta cgcgcacgtg cagaagctcg
      361 agcttgcctg gttcgagcgc aaccgcaccg gcaatttgat gtctattctg aacgacgaca
      421 tcaatcagat ggagcgcttc ttgaacggcg gcgccaacga cttgattcag gtcgtcacgg
      481 ggtcgttctt ggtcggcgcc gtgttcttcg cgctcaccac caagattgcg ctgctcgcgc
      541 tgctgccgat cccgctgatc atttacggcg cattctggtt ccaacgccgg ctcgcgccgc
      601 gctacgcgct cgtgcggcag cgtgcgggcg cgctcaacac gcggctcgcc aacaacctgc
      661 tcggcatcgc gacgatcaag gcgttcaccg cggaagagtt cgaactctcg cacgtggctg
      721 ccgactcgga cgcgtaccgg agcgcgaaca cgctcgcgat tcgcttctcg gcggcgatca
      781 cgccagtcat ccggatggcg atcctggccg ggttcacggt cacgctactt tacggcgggt
      841 ttctcgcgct gcgcggcgag atcggcgtcg gcagctactc ggtgctcgtc tacctcacgc
      901 aacgcctgct ctggccgctc acgcgtctcg cggacatgac cgatctgtat cagcgctccg
      961 tcgcgtccat cgagcgcgtg gtggatctac tcgacacgcc catcgcgatc ggcgccacgg
     1021 gtgcgccgct cctgccgagc gccgtgcgcg gtgagctccg cttcgagcac gtgacgttcg
     1081 cttacggcga cgagcccatc ctcgaggatt tgacgctcac gatcgcgccg gggacgaccg
     1141 tcgcgttcgt cggcgggacc ggcggcggca agagcaccat cgtgaagctg ctcttacgct
     1201 tctacgagcc cgagcacggc acgattcgtc tcgacggcgc tccgctgtcc ggcattgcgc
     1261 tcgccgatct ccgtcgcgtc atcggttacg tcgcccaaga caccttcctg gccgatgcca
     1321 ccgtcgccga gaacatcgcc tacggtcgcg aggacgcgcc tcgcgccgcg gtgatcgccg
     1381 cggccgaggc ggccgaagcg cgtgacttca tcgaagccct gccggagggc tacgagacac
     1441 ccgtcggcga gcgcggcatg aagctctcgg gcggccagcg ccagcgcatc gccctggcgc
     1501 gcgccatcct caaagatccg cgcatcttgg tgctcgacga agccacgagc gccgtcgaca
     1561 acgagaccga ggccgcgatc cagcgctcac tcgagcgtct ggtcgtcggc cgaacgagtc
     1621 tcatcatcgc ccaccgcctt tcgacggtgc gccacgccga ttgcatccac gtcgtcgaac
     1681 gcggccgcat cgtcgaatcg ggcacgcacg cggagctcgt cgcgcgcggc ggcgtgtacg
     1741 cggcgctctg gcgcttgcaa acgggcgagg ggcagacgga cgccctcgag acgcgcggtc
     1801 gatgctaaag tcccactcta tagtggtgcg atttggattt ggctcggagc ttgctgtcgt
     1861 gctcgtgctc gcggcggcat gcgggtcgca cgtcacgcac gctgatgacg acggcgctca
     1921 cggcgggagg gcccaaggcg gctccggtgc gaatgaggca gcgtccggcg ggcaagcggg
     1981 cgtgatgccg agtgccggcg actcgagcgc gccgctcggt gtcctcgact tgagcgggct
     2041 cgatgccagc gcgctcgcgt atccggcgcc gcccggcgtc gacgcagccc gggccagcgc
     2101 cgaaacgatc gtggcccgca tgacgctcac cgagacagcg acgctgcttt atggcggtgc
     2161 aggcggcatc atcggcggta cttcagcggc aggtcccatt cccgctctga gctacgacga
     2221 tggcccaggc ggcgtcgcgc acgtgagcgg cgcgacggct ttccccgatc cgatcacgct
     2281 agcggcaacg tgggatcgtg acctcgtcga gcgctgggcg gaggcgatgg gcgccgaaga
     2341 gcgcgccaag ggcgttgccg tgcagctcgg gccgatgctg aacctctcgc gcgtgccgct
     2401 cgcgggccgg aatttcgagt cgttcggcga ggacccgtat ctttccgccg agcttgcctt
     2461 tgccgacgtg cggggcattc agtcgaatca tatcgtcgcg accgcgaagc atttcgtcgg
     2521 caacgagcaa gagaccaatc ggacgagcga ggactcgcgc atcgacgagc gcacgttgca
     2581 cgaggtctac tacctgccgt tcgaggcgag cgtcagcgcg ggcgtggggt cggtgatgtg
     2641 ttcctacaac aaggtgaacg gcctgtacgc ctgcgaaaat cccgacacgc tcggcgactt
     2701 gaagggaacg ctcgggttct cgggctgggt gatgacggac tggggcgcag cgcacggctc
     2761 gggcgcggcc gccgcgggcc tcgatcaaga aatgccgtcg gcgagctact tcaccgcgag
     2821 cagcctcgcg ggaacgcgcg tcgacgacat ggccacgcgc ctggtcactt cgctcgttcg
     2881 cgtcggcgta ctcgacgatc cgcctacggg cgtctcctac gccgacgtga cgtcggccga
     2941 gcacacggcg ctcgcgcggg aggcggcgag cgtcggcacg acgttgctga aggacgacgc
     3001 gcacgcacta cccttcggca acgacgtgaa gtccatcatc gtgctcggcg ctgcgggtgg
     3061 cgacacgccg tactcgaccg gtgccggctc cggcgaagtc accgcggcgc acgtcacgag
     3121 cccactcgaa gccatcaccg cacgcgcgcc cgccggcacg agcgtgacgt acgtgcgcgg
     3181 cgacgtcgag tccgacgcca gcgcggccgc cgcggacgcg gacgcagccg tcatcgtggt
     3241 cgccgtcgct tcgggcgaat tcttggatcg ccaatcgctc tcgctcgacg ccgaaagtga
     3301 tgcgctcatc tccgccgtcg cggccgtgaa tccccgcacc atcgtcgtct tggacgtccc
     3361 cggcgccgtg atgatgccgt ggctcgacgc cgtgagcgga gtcgtcgtcg cctggtatcc
     3421 cggccaagag aacggcaatg cgctcgccgc tctcttgttc ggcgacgtga acccgagcgg
     3481 caaactcccg gtctcgttcc cgtccgccgc gaccgatctg cccgcgccgg gacctggcac
     3541 gagcgtcctt tacagcgaag gactcgcgct cggttaccgc ggcctcgaca gcgccggcct
     3601 cgacccgctg ttcgaattcg gattcggcct ttcctacacc accttcgcct atgacggcct
     3661 cgagctccgc tccggcgaga agcccggctc cgtggacgtg agcttccaac tgacgaacac
     3721 gggcacgttc gcaggctgcg aagtcgccca agtctatgtg tcgttcccgc ctaaagccgg
     3781 agagccaccc cgtgtcctgc gcggcttcga gcgtgtcgaa ctcgagcccg gcgaagcccg
     3841 ccgcgtgcac atcgagcttc cggcgcgcgc cttctcgtgc tggtcggcca ccgcacacgc
     3901 gcgatacgtg ccgagcggga gctatacggt gagcgtgggg agttcgtccc gacggctgcc
     3961 gttggcggcg tcattcgagg tggtgggggt gggggagccc taagccccgc gacattcctg
     4021 gtcagtgcgg caaccagcgc cgggcaccgt ggttcggagt tgcgctttta tgcgtgcgat
     4081 ggggcgtcgg tgtacctgga atggcacctg catgcggcga gcagcatgga aggtggcact
     4141 ccgccctcag cgcccgacgt agacggccgc gcggcagatt cgacgccgcc tccgtcgcat
     4201 gagccgtggt ggcggagggt gcgggggcgg gcgccgttca actggccacg caagcgcaag
     4261 cgtcgctggg tgattgggat cgttctcctc ttgct
//
LOCUS       DATIML010001230         1806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1705636, whole genome shotgun sequence.
ACCESSION   DATIML010001230 DATIML010000000
VERSION     DATIML010001230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1705636"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VLJ38_21240"
     CDS             complement(<1..268)
                     /locus_tag="VLJ38_21240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42125.1"
                     /translation="MGPVVFQPENDASALVTAVTGQLLRRSAAGRTLAERLQGVGVRF
                     ADVLDVLHVPPDAEFRRKLVASGFERLRDERAQARTELWEHPRAL"
     gene            467..1606
                     /locus_tag="VLJ38_21245"
     CDS             467..1606
                     /locus_tag="VLJ38_21245"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase NADP-binding
                     domain-containing protein"
                     /protein_id="HSU42126.1"
                     /translation="MHRVLVLGAGKIGRTIAHLLAATDDYEVTVADQDESALRLLHHR
                     VPRARFLPLDATDRAALARAMQAQDSVVSALAYTYNPLVAEVALELGPSYFDLTEDRE
                     TTRRVRDVAARARAGQVFMPQCGLAPGFISVVAYELTRGFDRLDSVYMRVGALPRFPS
                     NFLKYNLTWSTDGLINEYCNPCEAIHDGTLREVLPLEGLEHFWLDGVRYEAFNTSGGL
                     GSLCDTLGGKVRELNYKTIRYQGHRDYMAFLLTELRLSEERALTKQILERAVPVTFQD
                     TVVMFSTVAGWRNDQLVQVSDARRVYNSVVHGENFSAIQLTTAAGLCVMLDLQRQGVL
                     AERGLVRQEKVSLEAFLGNRFGECYRAPNASHFNLAMTELTSVPP"
     gene            1603..>1806
                     /locus_tag="VLJ38_21250"
     CDS             1603..>1806
                     /locus_tag="VLJ38_21250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42127.1"
                     /translation="MNGASEAAIESAPSVAARALERLGVPATAGGFALGSRFASGRGP
                     SLAVRSPIDGSTLRELGTASPAEV"
BASE COUNT          292 a          613 c          607 g          294 t
ORIGIN      
        1 ggagcgcgcg cggatgttcc cagagttcgg ttcgagcctg cgcgcgctcg tcacgcaggc
       61 gttcgaatcc gctcgcgacg agcttgcggc gaaactctgc atccggcgga acgtggagca
      121 cgtcgagcac gtcggcgaag cggacgccga cgccctggag tcgttcggcg agcgtgcggc
      181 cagccgccga gcgacgcagc aattggccag tcaccgccgt gaccagagcg ctcgcgtcgt
      241 tttcgggctg aaagacgacg ggacccatgg gcagctaccc ttcgattcag gatgaccgat
      301 accggcccat cgcgctacgg gtcgagcgcc ggtgccacgg cgcgcgcgac ggtgcgagcc
      361 cggtgggaga gcttcgcacc ttcaccccgg cttgcggtct cagccggcgg gagcaaaatg
      421 agaaggcaga gcgttcgttt ctaaggcacg ctcaccctgg gaagccatgc atcgcgttct
      481 cgtgctcgga gctggcaaga tcgggcgcac catcgcccat ctgctcgcgg ccaccgacga
      541 ctacgaagtc acggtcgccg atcaagatga atccgcgctg cgtctgctgc atcaccgcgt
      601 gcctcgcgcc cgctttttgc cgctagacgc gaccgatcgc gcggcgctcg cgcgcgccat
      661 gcaggcgcag gacagcgtgg tttcggccct cgcctacacc tacaatccgc tcgtggccga
      721 agtcgcactc gagctcgggc cgagctattt cgatctgacg gaggatcgtg agacgacgcg
      781 gcgcgtgcgc gacgtcgcgg cacgcgcgcg cgcggggcaa gtcttcatgc cgcagtgcgg
      841 cctcgctccg gggttcatct ccgtcgtcgc ctacgagctc acgcgcggct tcgatcgcct
      901 ggacagcgtg tacatgcgcg tgggcgcgct gccgcgcttt ccgtccaatt tcctcaaata
      961 caatctcacc tggtcgaccg acgggctcat caacgagtac tgcaatccgt gcgaggcgat
     1021 tcacgacggc acgttacgcg aggtgctgcc gctcgaaggc ctcgagcact tttggctcga
     1081 cggcgtgcgc tacgaggcgt tcaacacgtc gggcggactc gggagcctgt gtgacacgct
     1141 cggcggcaag gtgcgcgagc tcaactacaa gaccattcgc taccagggcc accgcgacta
     1201 catggccttc ttgctcaccg agctgcgctt gagcgaggag cgcgccctca ccaagcagat
     1261 cctcgagcgc gccgtgccgg tgaccttcca ggacacggtc gtcatgttca gcacggtggc
     1321 cggctggcgt aacgaccagc tcgtgcaggt gagtgacgcg cggcgcgtct acaactcggt
     1381 cgtgcacggg gaaaacttca gcgcgatcca gctcacgacc gctgcggggc tctgtgtcat
     1441 gctcgatttg cagcgccagg gagtgctcgc cgagcgcggt ctcgtgaggc aggagaaggt
     1501 gagcctcgag gcgttcctcg gcaaccgctt cggggaatgc tatcgggcac cgaacgcgag
     1561 ccacttcaac ctcgccatga ccgagctcac gtcggtgccg ccatgaacgg cgcgagcgag
     1621 gctgccatcg agtccgcgcc gagcgtcgcc gcccgggcgc tcgagcggct cggcgtgccc
     1681 gcgacggccg gcgggttcgc gctcggttca cgcttcgcga gcggacgcgg accttcgcta
     1741 gcggtgcgga gcccgatcga cggcagcacc ttgcgcgagc tcggcacggc gtcgccggcc
     1801 gaagtc
//
LOCUS       DATIML010001231         5888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3723918, whole genome shotgun sequence.
ACCESSION   DATIML010001231 DATIML010000000
VERSION     DATIML010001231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5888
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3723918"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..896)
                     /locus_tag="VLJ38_21255"
     CDS             complement(<1..896)
                     /locus_tag="VLJ38_21255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42128.1"
                     /translation="MRVAVWCLACAVIACGKSERHGDVARHGVAGNAASRGGNDGSAA
                     AASGAGNGASGSENGGTPANETAGTGGVSVNAGGDGNAGGRQASGGAGTSTASGGGGA
                     GVGASASEGGSSGDMETSDGGAAGAAPLACAGEYDACGCGCCGGTTPNTVCYYPDRGD
                     SLDTIKRDDQSVGTSPTCAAAGCAIGMHYVCCALQNEPPPAMSYAVTGGMITADITRV
                     SIYRTGTDERCQVAHFARGDGPGGKAFPITLPDGWILELFEDYLCADVNSQIPSKRRE
                     ALGATGQLGFSSTSGQCSVKFD"
     gene            965..1972
                     /locus_tag="VLJ38_21260"
     CDS             965..1972
                     /locus_tag="VLJ38_21260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42129.1"
                     /translation="MLAPLVVLAAVGAAGDVSPEGVNANAPVEHIALDYSAPAECPGD
                     PAFRAEVRERASGDWEAAPGELARRITVSVSRSGERYVAAIVFLNPEGERVSRSISGR
                     ECNDVVNGIALVTALAIQSRVEEAVAQSEPEAPKPAPSAPVPKPAPVVAPKPAVTSKA
                     PPEIHVRFGAAARVASGVGPGASVGPTAFGALEWRRARLGLSFGALWSGRVTVDGVSA
                     SYRRLSGRIDGCPYAFGTARFSFEPCAFFEAGSLHGQGEPGAQLSAASGGASPWLVPG
                     VLLRLVAAFEPVVVELELGGGPPLVREQFGVVGGDGVQHPTFQVPPFVLDGMLGIGLR
                     W"
     gene            2067..2651
                     /locus_tag="VLJ38_21265"
     CDS             2067..2651
                     /locus_tag="VLJ38_21265"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU42130.1"
                     /translation="MVLLGTAMVHLTALTAEAEPAARNVEQFVREHYGFTWRVLRRAG
                     LSAEDADDAAQRVFLIATARLSDIQRGSERAFLFRTATHVASKAHRSRRRRPDAPSSE
                     MDEPASELPALDELVDQRRARELLDRILAELEPEVRAIFVLFDIEGLKKNEVAEALGI
                     PPGTVASRLKRARKEIEARVARLRARAQRTGGLP"
     gene            2648..3607
                     /locus_tag="VLJ38_21270"
     CDS             2648..3607
                     /locus_tag="VLJ38_21270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42131.1"
                     /translation="MTEPKRWIDDGPPEAIQHLLRAASAERPTEQSLSRTLTVLGVGV
                     GASGAAATAGAATAAGSATAAGGTMTAGGAAASGALGAAGVKATTIVVASGVVKWGAV
                     VTALAVAAVAGRGALKHAASATSNQPATTAVPPSAVVAPRRVEARLGIAATAVSAGAE
                     ARVSAAATASGSAEGPLQSGPKSTATEPNVARKSSRGVSAMQKSPSAVADAPAIAVAP
                     TVVDASPVDTEHLAEEVALVDRARGALASGDAAGALAALDEYDAHFTRRKFGPEALYL
                     RMESLLREGRAEAARGVARSLTNSYPKSPHAARARQVLGQTIP"
     gene            3673..4656
                     /locus_tag="VLJ38_21275"
     CDS             3673..4656
                     /locus_tag="VLJ38_21275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42132.1"
                     /translation="MKTATITAPFLLAFLVAGCGGDFTELGTQAGRGGNGATAGVGGN
                     GATGGKGSGGTQGSGATGNTGALGGNGATGGSAECTKDTDCPKSLVACQLCADGSSAC
                     PWAHCDAGQCTAGIDTCPATECKVDDDCPKSKALCQLCADGSSACPWAHCDAGQCTAG
                     IDTCPATECKVDGDCPKSQAPCQLCADGSSACPWAHCNAGQCTAGIDTCPAPTDPCAG
                     KACGDVCTTCTNGQGCLTVVMYCDANLTCQVSQPVCAKTSCTADTDCAPDNNICVDQI
                     GGPGPAQGFECATRQPCGSADPCACILNEGTCTHVTVDGTPGYCQCDNGLD"
     gene            complement(4670..5461)
                     /locus_tag="VLJ38_21280"
     CDS             complement(4670..5461)
                     /locus_tag="VLJ38_21280"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSU42133.1"
                     /translation="MLRRRGARVNPYKILQVDRDAEPEVIEAAYRRLVAKYHPDRNDS
                     PEAGAMLRDLNAAYELVSDPERRAHYDREWANGRGPRRASQAPQHDDGDDETPNRVVL
                     NVLVAGAVLTLLVYQPRLGATLVGLSALIWLAWKYALITAVVGRSVLALLVLVVLGFA
                     ARYWLEERRAATELRGLDLKTLFAAKLREQSRQCMAPAPARVRPSAAFCECLADAIRS
                     QFDFSAVNVDTAADFRAAVSTRFEHALPSDEARAACLARDVPAAR"
BASE COUNT          922 a         1961 c         2076 g          929 t
ORIGIN      
        1 aagtcgaact tgaccgagca ctgcccgctc gtgctcgaaa agccgagctg acccgtggcg
       61 ccgagcgcct cgcggcgttt gctcgggatc tgactgttca cgtccgcgca caggtagtcc
      121 tcgaacagct ccaagatcca gccgtccggc agcgtgatcg ggaacgcctt gccaccgggg
      181 ccgtcaccgc gcgcaaagtg cgcgacttgg cagcgctcgt ccgtgcccgt ccggtagatc
      241 gagacccggg tgatgtccgc cgtgatcatc ccgccggtga ccgcgtagga catcgccgga
      301 ggtggctcgt tctgcagcgc gcaacagacg tagtgcatgc cgatggcaca gccggcggct
      361 gcgcaggtcg gactcgttcc aacgctctga tcgtcacgct tgatcgtatc gagcgagtcc
      421 ccacgatccg ggtagtagca aacggtattg ggcgtcgttc cgccgcagca gccgcaaccg
      481 caggcatcgt actccccggc gcacgcgagc ggcgccgccc cagccgcacc tccgtcgctc
      541 gtctccatgt caccggacga gcccccttcg ctggcgctcg cgccgacgcc tgcgccgcca
      601 cctccactcg ccgtgctcgt tccagcaccg ccgctcgcct gccgtccgcc ggcattgccg
      661 tcaccccccg cgttaacgga gacgccgccc gtacctgccg tctcattcgc gggggtacca
      721 ccgttctcgc tgccgctggc tccgttaccc gcgccgctcg ccgctgccgc gctgccgtcg
      781 ttgcccccgc gggacgcggc gttgcctgcg acaccgtggc gagcaacgtc gccgtgccgc
      841 tcgctcttgc cgcacgcgat gaccgcgcac gctagacacc acaccgctac ccgcatcagg
      901 ggagcttact cgatgcgcga aaattggcga tcgatgctag tggtctcggc tgtaggtggt
      961 ttcagtgctg gctccgttgg tcgtcctcgc cgctgtcggt gcagcgggtg acgtgtcgcc
     1021 ggaaggcgtg aacgcgaacg ctcccgtcga gcatatcgcg ctcgactaca gcgcgccggc
     1081 ggaatgcccg ggtgaccctg cctttcgggc cgaagtgcgc gagcgggcga gcggcgactg
     1141 ggaggcggcg ccaggtgagc tcgcgcggcg catcacggtg tcggtgagcc ggagtggcga
     1201 gcgctacgtg gccgcgattg tatttttgaa ccccgagggt gagcgggtct cgcggagtat
     1261 cagcgggcgc gagtgcaacg acgtggtcaa cgggatcgcg ctcgtgacgg cgctggcgat
     1321 tcagtcgcgg gtcgaggagg cggtcgccca gagcgagccc gaggcgccca agcctgcccc
     1381 gagcgcgcca gtgccgaaac ccgcccccgt cgtcgcgccg aagcccgcgg tgacatcgaa
     1441 ggccccgccg gagatacacg tgcgcttcgg cgcagcggcg cgtgtggcga gcggagttgg
     1501 accgggcgcg agcgtcgggc cgactgcgtt cggtgcgctc gagtggcggc gggcgcggct
     1561 cggtctgagc ttcggcgcgc tgtggtcggg gcgcgtcacg gtggacggcg tctcggcgag
     1621 ttaccggcga ctgagcgggc gcatcgatgg ctgtccgtat gcgttcggta ccgcacgctt
     1681 ttcgttcgag ccgtgcgctt tcttcgaggc cggctcactt catggccaag gtgaaccggg
     1741 cgcgcaattg tcggcggcga gcggcggcgc ttctccgtgg ctcgtacctg gagtcttgct
     1801 gcggctcgtg gcggcattcg agcccgtcgt cgtcgagctc gagctgggcg gcgggccacc
     1861 gctcgttcgc gagcagttcg gggtcgtcgg gggcgacggt gtgcaacacc cgacctttca
     1921 ggtgccgccc ttcgtgctcg acggcatgct cggcatcggg cttcgctggt gacgagcgct
     1981 gaagcgacgc tgtaaccaga ggtgtgtgcg tccgctggca gcgcggcgaa ttgtcgatcc
     2041 agctgccgcg agccggggat gggcgcatgg tgttgcttgg cacggctatg gttcatttga
     2101 cggcgctcac ggccgaggcc gagcctgctg cacggaatgt cgagcagttc gtgcgcgagc
     2161 attacgggtt cacctggcgg gtgctcaggc gcgcgggact ctccgccgag gacgccgacg
     2221 atgccgcgca gcgggtcttt ttgatcgcca cggcgcggct ctccgacatc cagcgcgggt
     2281 cggagcgcgc gtttctattc cgcacggcga ctcacgtcgc ttccaaggcc catcggtcgc
     2341 gccgtcgccg gccggatgct ccgagctcgg aaatggacga gcccgcctcc gagttgcctg
     2401 cgctcgacga gctcgtcgat cagcggcgcg cgcgcgagtt gctcgatcgc atcctcgcag
     2461 agctcgagcc cgaggtgagg gccattttcg tgctgttcga catcgagggg ctcaagaaga
     2521 acgaggtcgc cgaagcactc ggtattccgc cgggcacggt ggcttcacgt ctgaaacgcg
     2581 cgcgtaagga aatcgaagcg cgcgtggcgc gcctacgcgc tcgggctcaa aggaccggag
     2641 gattgccatg actgagccga aacgctggat cgacgatggt ccgcccgaag cgattcagca
     2701 cctacttcga gccgcgtccg ccgagcggcc gacggagcaa tcgctctcgc gcaccttgac
     2761 ggtgctcggc gtgggtgttg gggcgagtgg tgcggcagcg acggcaggag ccgcgacggc
     2821 cgccggcagc gctacggcag cgggtgggac catgacggcc ggtggcgcag ccgcgagcgg
     2881 cgcgctcgga gcggcgggcg tcaaagcgac gaccattgtc gtggcgagcg gagtcgtgaa
     2941 gtggggagcc gtcgtgacgg cgctcgccgt ggctgccgtt gccggcaggg gcgcgctcaa
     3001 gcacgcggcc agcgcaacct cgaatcagcc cgcgacgacc gcggtgccgc cgagcgccgt
     3061 ggtcgcgcct cggcgtgtgg aagcgcggct tgggatagcg gcgacggccg tgagtgcggg
     3121 cgcggaagct cgagttagcg cggccgcaac ggcgagtggg agcgcagaag ggccgctgca
     3181 gagcggtccg aagagcacgg cgacggagcc gaacgtcgcg cggaaatcgt cacgtggcgt
     3241 gtcggcgatg caaaagtcgc cctccgccgt tgcggatgcc ccggcaatcg cggtcgcgcc
     3301 taccgtcgtg gatgcgtctc ccgtcgacac cgagcacctc gccgaggaag tcgcgttggt
     3361 cgaccgagcg cgcggagcac tcgcgagcgg cgacgcggcc ggcgcgttgg ccgcactcga
     3421 cgagtacgac gcacacttca cccgccgcaa gttcgggcct gaggcgctct acctgcgcat
     3481 ggaatcgctc ttgcgcgagg gacgagcaga ggcggcgcgt ggtgtggccc gatcactcac
     3541 gaactcctac ccgaagagtc cgcacgcggc gcgagcccgc caagtgctcg gccagacgat
     3601 tccatgatcc agcccacggc cggcggggat gagcgcaatg attcggcttc gattgggccg
     3661 ggaggataac gcatgaaaac tgcaacgatt accgctccgt ttttgttggc cttcctcgtt
     3721 gcgggctgtg gcggtgactt caccgagctc ggcacgcagg cggggcgcgg tggcaacggc
     3781 gccacggccg gcgtgggcgg caacggcgcg accggtggca agggaagcgg cgggactcag
     3841 ggttccggcg cgacgggcaa caccggcgcg ctgggcggca acggcgcgac gggagggtcc
     3901 gcggagtgca ccaaggacac cgactgtccg aagagccttg ttgcttgcca gctctgcgca
     3961 gacggttcga gcgcgtgtcc ttgggcgcat tgcgatgcgg ggcagtgcac ggccggcatc
     4021 gacacttgcc ccgccaccga gtgcaaggtc gacgacgatt gtccgaagag caaagcgctt
     4081 tgccagctct gcgcagacgg ttcgagcgcg tgtccctggg cgcattgcga tgcgggccaa
     4141 tgcacggccg gcatcgacac ttgccccgcc accgagtgca aggtcgacgg cgattgtcca
     4201 aagagccaag ccccttgcca gctctgcgca gacggctcga gcgcgtgccc ctgggcccac
     4261 tgcaatgcgg gtcagtgcac ggccggtatc gacacttgcc ctgcgccgac cgatccctgc
     4321 gcgggtaaag cttgtggcga tgtgtgcacg acgtgcacca atggccaggg ctgcctcacg
     4381 gtagtgatgt actgtgacgc gaacctcacc tgtcaggtga gccaaccggt ctgcgccaaa
     4441 acgagctgca cggccgacac cgattgcgcc ccggacaaca acatctgcgt cgatcagatc
     4501 ggcggcccgg gcccagccca gggcttcgag tgcgcgacgc gacagccgtg cggctcggca
     4561 gacccttgcg cgtgcatcct caacgaagga acgtgcactc acgtgaccgt agacggaaca
     4621 cctggttact gtcagtgcga taacgggctc gactgagccg accccggagt cagcgcgcgg
     4681 ctggcacgtc gcgcgcgagg caggccgcgc gagcctcgtc gctcggcagc gcgtgctcga
     4741 aacgcgtgga cacggccgca cggaagtctg cggccgtatc cacgttgacc gccgaaaaat
     4801 cgaattgcga gcggatcgcg tccgccaagc actcgcaaaa agcggccgag ggccgcacgc
     4861 gagcgggagc cggcgccatg cactgccgcg actgctcgcg gagcttcgca gcaaacagcg
     4921 tcttcagatc gagaccgcgg agctccgtcg ccgcccgacg ctcttctagc cagtagcgcg
     4981 cggcgaagcc gagcacgacc agcacgagca gcgcgagcac gctgcgcccg accacggcgg
     5041 tgatgagggc gtacttccac gcgagccaaa tcagcgccga caggccgacg agggttgccc
     5101 cgagccgcgg ctgatacacg agcagcgtca agacggcgcc tgcgacgagc acgttgagca
     5161 ccacgcgatt cggcgtttcg tcgtcgccgt cgtcgtgctg cggcgcttgg ctcgcgcgcc
     5221 gagggcccct gccgttcgcc cattcgcgat cgtagtgcgc gcgccgctcg ggatcgctca
     5281 cgagctcgta ggccgcgttc agatcacgca gcatcgcgcc cgcctccggc gagtcgttgc
     5341 gatccgggtg atactttgca acgagccggc gataggccgc ttcgatgacc tccggctcgg
     5401 cgtcgcggtc gacttgtagg atcttgtagg ggttcactcg agcgccgcga cgacgaagca
     5461 tggcatggcg accgcgccgg ccccccggga tgacccccgg ccccccgtcc gttgccgcag
     5521 cacctcctta acttagcgat tcgtcagcgt cctccgtttt tcctgcaccc cgggaatacc
     5581 gcgtgtcccc aggggtttct cggcgtgccg gttgtcggca gcttcaaagc gcagggtctt
     5641 cggttgacag ggatcgagtc gaaagtagga tgccgccgcc cgacggtcgg gcacggcagc
     5701 gcgaaaagtg ccggtagatc cgcgcaaatt cgaaagtttc tgtaaggagg tcggatggca
     5761 accgacgtca tgatccaagc gagcggcgtt accaaacggt tcggtcacgt ccgtgcgctg
     5821 gacaaggtca gcttcgaggt caagcgcggt gaagtcgtag gattcctggg gccgaacggc
     5881 gccgggaa
//
LOCUS       DATIML010001232         2887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1125391, whole genome shotgun sequence.
ACCESSION   DATIML010001232 DATIML010000000
VERSION     DATIML010001232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1125391"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..932)
                     /locus_tag="VLJ38_21285"
     CDS             complement(<1..932)
                     /locus_tag="VLJ38_21285"
                     /inference="COORDINATES: protein motif:HMM:NF040244.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HSU42134.1"
                     /translation="MSADSEDRLVSLARSVGRRALEKGADVAEVGARGGFELSVKVRL
                     GKPELVEEAGHHSVSLRVLRGGRVAVTSTSDLTETGIARCVEDALELVELSEVDPQAG
                     PADPSELSQPPFPNLELFDPAVAAIDGEEALARALAGERAALDFDRRIELSEGATFAR
                     SDSVGALWLSSGFEGVQRGSYASLSVVPVVSDEGGKKRRGYYWTGSRFVEKLEDAGEV
                     GREAARRTLAKLGARKVPTAEAPIVFDPDVARSLLGSFAGCILGGSIWRKASYLLERE
                     GTAVASPLVNITDDPLLPRAPGSRPYDGEGLASR"
     gene            complement(1048..1587)
                     /locus_tag="VLJ38_21290"
     CDS             complement(1048..1587)
                     /locus_tag="VLJ38_21290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42135.1"
                     /translation="MLPAPLLGFTLGVLFAWMARHEIARAASTALASRSLSIVALYAV
                     LVFGPACAYFLVLEPDWAGAYLFDAGRRARLVPVAGTLLALVSVPFGFLVAAPAARAQ
                     RAVSVLRLGAVAALSTVALTLALFPRLSVRATYAEYHGDFGTESVAHTTLGWGLLWVA
                     VVVSGASAYVAAVLGRSTR"
     gene            1733..2500
                     /gene="larB"
                     /locus_tag="VLJ38_21295"
     CDS             1733..2500
                     /gene="larB"
                     /locus_tag="VLJ38_21295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HSU42136.1"
                     /translation="MSPERVFELLERVRAGTLRPEAAVVELGNLPFQDLGYARVDHHR
                     ALRQGLPEVILGQGKTAEQIIGIAKSLLAAGQNVLVTRLDAEAAPQVLSAVPELEHHA
                     VARTALALKHPVAAVPGPPVAVVTAGTSDLPVAEEALETLRAAGVPTERVVDVGVAGL
                     HRLLDRVTALRRARALIVVAGMEGALPSVIGGLVAAPVVAVPTSIGYGAAFQGLTALF
                     GMLTSCASGVTVVNIDNGFGAAMAVLRLIRAPGAETT"
     gene            2497..>2887
                     /gene="larC"
                     /locus_tag="VLJ38_21300"
     CDS             2497..>2887
                     /gene="larC"
                     /locus_tag="VLJ38_21300"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel insertion protein"
                     /protein_id="HSU42137.1"
                     /translation="MTAGHPHYDYERHQLHPHDHEHTAEDAAHAHAHDHAHSYGHSHA
                     AVGRVTLLPGDAEAHRVPLERGAGKGKLLFVDPWSGIAGDMTVAALVDLGVPFEVVQR
                     TLAALEIEGTATVSRAQSGALGATYFSV"
BASE COUNT          457 a          996 c         1012 g          422 t
ORIGIN      
        1 ttgcgcgagg cgaggccttc accgtcgtag gggcgtgaac ccggcgcgcg cggaagcagc
       61 ggatcgtcgg tgatgttcac gagtgggctc gcgaccgcgg tgccttcgcg ttcgagcagg
      121 tagctcgctt tgcgccagat cgagccgccc aggatgcaac cggcgaagct gccgagcagt
      181 gaacgggcga cgtccggatc gaacacgatg ggcgcttccg ccgtcggcac cttgcgcgcg
      241 ccgagcttcg cgagtgtgcg gcgcgcagct tcgcgtccga cttcccccgc gtcctcgagt
      301 ttttcgacga agcgcgaccc ggtccaataa tagccgcgcc gcttctttcc gccctcgtca
      361 ctcacgacgg gcacgacgct gagcgaagcg tacgacccgc gctgcacgcc ctcgaagccg
      421 ctcgaaagcc agagtgcgcc cacggaatcg gagcgcgcga acgtcgcgcc ttcgctgagc
      481 tcgatgcgcc gatcgaagtc gagcgcggcg cgttcaccgg cgagcgcgcg ggcgagcgct
      541 tcttcgccgt cgatggcggc cacggccgga tcgaagagct cgagattcgg aaaaggtggc
      601 tgactgagct cgctcggatc ggcagggccc gcttgcggat cgacctccga gagctcgacg
      661 agctcgagcg cgtcctcgac gcagcgcgcg atgcccgtct cggtgaggtc gctcgtgctc
      721 gtgacggcga cgcgcccgcc gcgcaacacg cggagcgaga cgctgtggtg gccggcttct
      781 tcgacgagct cgggcttgcc gagccgcacc ttcacgctga gctcgaagcc gccgcgtgcg
      841 cccacctcgg ctacgtcggc tcctttttcg agcgctcgcc gccccacact gcgcgcgagc
      901 gacaccaggc gatcttcgct gtcggctgac atacgtcgag atctagtaca tcgacgcgac
      961 gggcgttcgt cgattcggtc atttccggga tggaacgccc ggttttgttg ccgttcggcg
     1021 tagcgggcgc gtgccgaacc tgccggctca gcgcgtggag cggccgagca cggcggcgac
     1081 atacgcgctc gcgccgctca cgacgacggc cacccagagc aaaccccagc cgagcgtcgt
     1141 gtgggccacc gattccgtgc cgaagtcgcc gtggtactcg gcgtaggtcg cgcggaccga
     1201 gaggcgaggg aacagcgcga gcgtgagggc caccgtcgac agggctgcga ccgcgccgag
     1261 ccggagcacg ctcaccgcgc gttgagcgcg cgccgccggg gccgcgacga gaaagccgaa
     1321 cggcacgctc acgagcgcga gcagcgtccc ggcgacgggc acgagccgcg cacgccggcc
     1381 cgcatcgaac aagtaggcac ctgcccaatc gggctcgagc accaaaaaat acgcgcaagc
     1441 cgggccgaaa acgagcacgg cgtagagcgc cacgatggat agcgagcgac tcgcgagcgc
     1501 agtggacgcc gcccgagcga tttcgtgccg cgccatccag gcaaagagga cgcccaaagt
     1561 gaatccgagg agcggggcgg gaagcatcgc cgggtgcaca ttggacgcga gttcgtgagc
     1621 cgtgaacagc cccgaagcgt cccgaagcgc gcgcgcgctc ggtctgcccc gagcgctgag
     1681 cggtctcgcc ggcgttcgac gcgccccgcg gcctgcgcta aacgtggcga gcgtgagccc
     1741 agaacgcgtc ttcgagctgc tcgagcgagt gcgtgccggt acgctgcgcc cggaagcagc
     1801 ggtcgtcgag ctcggtaatc ttccgttcca ggatttgggg tacgcgcgcg tcgaccacca
     1861 ccgcgctctg cggcagggcc tgcccgaggt aattttgggt cagggtaaaa cggccgagca
     1921 aatcatcggc atcgcgaaga gcctgctcgc tgccggccag aacgtgctcg tgacgcgcct
     1981 cgacgccgag gccgcgcccc aagtgctgtc ggccgtgccg gagctcgagc accacgcggt
     2041 cgcgcgcacg gcgctcgcct tgaagcaccc ggttgccgcc gtgcccgggc cgcccgttgc
     2101 ggtggtgacc gcaggcacga gcgacctgcc cgtcgcggag gaggcgctcg agactctgcg
     2161 cgcggccggc gttccgaccg aacgcgtcgt cgacgtcggc gtcgccggtc ttcaccgcct
     2221 gctcgaccgg gtgactgctc ttcgtcgtgc gcgagcgctg atcgtggtcg ccgggatgga
     2281 aggggcgctg ccgagcgtca tcggagggct cgtggcggcg ccggtcgtcg ccgtgccgac
     2341 ctcgatcggc tatggcgcgg cgtttcaggg cctgaccgcg ctcttcggca tgctcacgag
     2401 ttgcgcgtcg ggcgtgacgg tcgtcaatat cgacaacggg ttcggtgcgg cgatggccgt
     2461 gctgcgcctg atccgagccc cgggcgccga aaccacatga ccgcaggcca tcctcactac
     2521 gattacgagc gtcaccaact gcaccctcac gatcacgagc acacggcgga agacgcggcc
     2581 cacgcgcatg cgcacgacca cgcgcattca tacgggcact cccatgctgc cgtcggccgg
     2641 gtcacgctac tcccgggcga cgcagaagcg catcgcgtgc cgctcgagcg cggagctggc
     2701 aagggcaagc tcctttttgt cgatccgtgg agtgggatcg caggcgacat gaccgtggcg
     2761 gcgctcgtgg atctcggcgt gccgttcgag gtcgtgcagc gcacgctcgc tgcactcgag
     2821 atcgagggaa cggccacggt gagtcgcgcg cagtccggag cgctcggcgc gacctatttc
     2881 tccgtga
//
LOCUS       DATIML010001233         2364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2568464, whole genome shotgun sequence.
ACCESSION   DATIML010001233 DATIML010000000
VERSION     DATIML010001233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2568464"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VLJ38_21305"
     CDS             <1..351
                     /locus_tag="VLJ38_21305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42138.1"
                     /translation="VAPAVALTDWLAPRFQHQSSGVRSALDGALFYAAFTLLTWPFAS
                     FLQTPYADNRLFVGNEFAFFQAETSYPLRHQFYATETSASGFWSGMALALALAVVSRR
                     LGLGVSRFLRGVRR"
     gene            348..1811
                     /locus_tag="VLJ38_21310"
     CDS             348..1811
                     /locus_tag="VLJ38_21310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42139.1"
                     /translation="MTRSYRCLAVAVVLCTVTQAEPSPAHVGSPEVLHEGDAGPYHLR
                     VALSPPVTVPGQAHVQFRTTSTDLETLEVVPMVMHQERYAPPAERAQRDERDPHTFSA
                     DLWIMTPGTWKVRIRARGRRGEGELSLPVPALPPPVRQMRMPLAVALSAAALALLVAA
                     LAIVRAAAREARLPPGESVTRDDERRGRRAVLAASAVLGVVVLGITAWWNDTDRLYAG
                     MTYRPTGMTAWVDDAGRLFARLEDPGWLSRRPDDLVADHGHLMHLYAVRLPDLDRALH
                     LHPDLESPGLFARDLPALPAGRYRLFGDLVHQTGLAETAVADLELPELPGKPLVGDDA
                     SRELPPWPRALAGAPVTLEDGAVMRFAAYEALVAGQVRRLGFRVTTSGGGTVVLEPYL
                     GMLGHLAVIAHDLSVFSHVHPSGTVPMAALAVAQSVTAVSECAPSDAGAPTPGVSSDS
                     VAFPYLFPHAGGYRLIVQIKRAGRVLTAAFDVQVSAP"
     gene            1808..>2364
                     /locus_tag="VLJ38_21315"
     CDS             1808..>2364
                     /locus_tag="VLJ38_21315"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HSU42140.1"
                     /translation="MSDGDAAQASGVPVATRSTFGEVLATFSPARNLRELFTPPAEYF
                     APLDGIRALFPFWVIAAHCVFVCGVQEFRSGIRAYPGLRLLLLAHYALEAFFVLSGFL
                     LGNLLMREHDRTGTIALGRYFLRRAARILPAYYVAIVACSLFHFTNQNNLVWNVLYAN
                     NFLPIARQFMPWTWSLAVEEHFYLAL"
BASE COUNT          313 a          856 c          749 g          446 t
ORIGIN      
        1 gtcgcgccgg ccgtggcgct gaccgactgg ctcgcaccgc gcttccaaca ccagagttcg
       61 ggcgtgcgca gcgctctcga cggcgcgctg ttttatgcgg cgttcaccct cctcacctgg
      121 ccgttcgcga gctttttgca gacgccgtac gccgacaacc gactgttcgt aggcaacgag
      181 ttcgccttct ttcaggcgga gacgtcgtat ccgctgcgtc accaatttta tgcgaccgag
      241 accagcgcgt ccgggttttg gtccggcatg gccttggcgc tcgccctcgc cgtcgtctcg
      301 agacggctcg gtctcggagt ctcgcgcttt ctgcgcggag ttcgacgttg actcgctcct
      361 atcgctgcct cgccgtcgcc gtcgtcttgt gcaccgtcac gcaggccgag ccgagccctg
      421 cgcacgtcgg cagccccgag gtcctgcacg agggcgacgc cggaccgtac cacttgcggg
      481 ttgcgctctc gccgcccgtc acggtgccgg gacaagcgca cgtgcagttt cgtacgacgt
      541 ccaccgacct cgagacactc gaagtcgttc ccatggtgat gcatcaagag cggtatgccc
      601 cgcccgccga gcgcgcccag cgcgacgaac gcgacccgca cacgttcagc gctgaccttt
      661 ggatcatgac gccaggcacg tggaaggtcc ggatccgcgc ccgcggccgg cgcggtgaag
      721 gcgagctttc cctgccggtc ccggcgctgc cgccacccgt gcgtcagatg cggatgccgc
      781 tcgcggtggc cttgtccgca gcggcgctcg cgctgctcgt cgcggcgctc gcgatcgtgc
      841 gcgctgccgc gcgcgaggct cgcctcccgc cgggcgagtc ggtcacgcgg gacgatgaac
      901 gccgcggccg gcgcgccgtc ctcgccgcga gcgccgtgct cggcgtggtc gtgctcggca
      961 tcactgcgtg gtggaacgac accgatcggc tctatgccgg catgacctac cgtccgacgg
     1021 ggatgacggc ctgggtcgac gacgcggggc gcctgttcgc gcgcctcgag gatccggggt
     1081 ggctctcgcg ccggcctgac gatctcgtgg ccgatcacgg ccatctcatg cacctctacg
     1141 ccgtgcgcct gccggacctc gatcgcgcgc tccacttgca tcccgatctc gagagccccg
     1201 gcctcttcgc acgtgacttg ccggcgctgc cggctggacg ctaccgcctg ttcggcgatc
     1261 tcgtgcatca aaccggcctc gccgagacgg ccgtggccga tctggagctc cccgagctcc
     1321 caggcaagcc gctcgtcggc gacgacgcca gtcgcgagct tccaccctgg ccacgcgcac
     1381 tcgcgggcgc ccccgtgacc ctcgaggacg gcgcggtcat gcgctttgcc gcctacgaag
     1441 cgctcgtcgc gggccaagtg cggaggctcg gctttcgggt gaccacgtca ggcggcggaa
     1501 cggtggtgct cgagccctac ctcggaatgc tcggtcactt ggccgtgatc gcgcatgatc
     1561 tttcggtatt ttcccacgtg cacccgagcg gcaccgtgcc gatggcagcg ctcgccgtag
     1621 cccaaagcgt caccgcggtg agcgaatgcg caccgtccga cgccggcgcg ccgacacccg
     1681 gtgtgtccag cgacagcgtc gcttttccct acctatttcc gcacgcaggc gggtatcgct
     1741 tgatcgtgca aatcaagcgc gctggacgcg tgctgaccgc agccttcgac gtgcaagtga
     1801 gcgcgccgtg agtgatggcg acgccgcgca ggcgagcggc gtgccggtcg cgacgcgctc
     1861 gacgttcggc gaagtgctcg cgactttctc gcccgcgcga aacttgcgcg agctcttcac
     1921 gccgcctgcc gaatacttcg cgccgctcga cggcattcgc gccctgttcc cgttctgggt
     1981 catcgcggcg cattgcgtgt tcgtgtgcgg cgtccaagag tttcgctccg gcatccgcgc
     2041 ctatcccggt ttgcggctct tgctcctcgc gcattacgcg ctcgaagcct tcttcgtgct
     2101 cagcggcttc ttgctcggca acttgctgat gcgagaacac gaccgcacgg gaacgatcgc
     2161 cctcggccgc tatttcttgc gtcgcgcggc gcgcatcctg ccggcctact acgtcgcgat
     2221 cgtcgcttgt tccctgtttc acttcacgaa ccaaaacaac ctcgtctgga acgtccttta
     2281 cgcgaacaat ttcttaccga tcgcacggca attcatgccc tggacgtggt cgctggcggt
     2341 cgaggagcat ttttatctgg cgct
//
LOCUS       DATIML010001234         3029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_837983, whole genome shotgun sequence.
ACCESSION   DATIML010001234 DATIML010000000
VERSION     DATIML010001234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_837983"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VLJ38_21320"
     CDS             <1..857
                     /locus_tag="VLJ38_21320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42141.1"
                     /translation="AARAPRESEWRELARAVLAEKRPGEPVVVAPAWADPFAREAFGD
                     RAFPLDELARSDDATFTRLLEVSALGARYEPARSWRVVSEAQHGRFTLRVLENPAPLR
                     VRYRFIEHVNPRELSVELVAGTQVVPCEYNEHAPVAAGGLHGEVAFPRERFVCGGMPA
                     SASFVGVTVIDDQNYEPRRCIWAAPPAGFTLRLVFSGVPLGSALRGFAGLSYFLFRDS
                     DAAPVTLEAASDGVPLGGYVHRDAWGFHPFRIATAANAGRTARVELALHAGETPQRDF
                     CFTLEALE"
     gene            854..2497
                     /locus_tag="VLJ38_21325"
     CDS             854..2497
                     /locus_tag="VLJ38_21325"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU42142.1"
                     /translation="MSTPSRPERSDFAIAGALGAGYLALLLGSAHSLGYTRDEGFYTY
                     AARVLELWFDRVANAGSAAFDRTNIDHFWNPIHEHPGLLKLLFALSHHFLHERWPLIG
                     ESGTAYRLPGMLLGGLAVAVLYLWGREAVGRTAGVVSALLFALMPRVFFHSHLACLDV
                     AVTAMWLVTSYVYLRAFRDNRLGAVLGVGVLYGFFLDTKHNAWLFPFALVVHLVALRL
                     LERFRKLPRTGPRVPWALLSVISVGPLVLWVIWPWLWFDTSERVRAWFEFHLQHDYYN
                     MEFLGRTYWKPPMPALYAPVMTLATVPAITLALFALGLFETGRALVRGDGSERVAHDA
                     LWLVGLGLSYAPWLSQSTPIFGGTKHWLPAYPFLCLIAGRGFALASARLRELWAERFQ
                     KPELVPPVLAALCLAGPLAMTLHSHPWGLTFYTPLAGGAPGAASLGLNRTFWGYATGA
                     LADELNELAPPNAAVYVHDTALQSWELFREDGRIRADLAGTLSLPSSSLALYHHEPHM
                     RRVEFETWVVYGTVSPVAIGSYDGVPVAWLYARDELRRR"
     gene            2681..>3029
                     /locus_tag="VLJ38_21330"
     CDS             2681..>3029
                     /locus_tag="VLJ38_21330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42143.1"
                     /translation="MTLRRVLAAFLAVAFAGTFAPARAHAQNGEDGWFEGADGTPQQL
                     PPSTAPAQAAAPAPAAAPPASPAEPNIPATPAAPAAPAQPQSLAPSPLYDRGTATPAG
                     TPAPAAADADDQDP"
BASE COUNT          398 a         1082 c         1007 g          542 t
ORIGIN      
        1 ttgccgcgcg tgcgccgcgc gaaagtgaat ggcgcgagct cgcgcgtgcg gtcctcgccg
       61 agaagcgccc cggcgagccg gtggtcgttg cacctgcctg ggccgacccg ttcgcgcgcg
      121 aggcgttcgg cgaccgtgcg ttcccgctcg acgagctggc gcgctccgac gacgcgacgt
      181 tcacgcggtt gctcgaggtg tcggcgctcg gcgcgcgcta cgagcccgca cggagctggc
      241 gcgtcgtgtc ggaggcgcag cacggccgct tcacgctgcg cgtcctcgaa aatcccgcgc
      301 cgctgcgcgt tcgctatcgc ttcatcgagc acgtgaaccc gcgggagctc agcgtggagc
      361 tcgtcgccgg aacgcaggtc gtgccttgcg aatacaacga gcacgccccc gtcgccgcgg
      421 gcgggctgca cggcgaagtc gcgtttccgc gcgaacgctt cgtgtgcggc ggcatgccgg
      481 cctcggcgtc gttcgtgggc gtcaccgtca tcgacgatca aaactacgag ccacggcgct
      541 gcatttgggc ggcgccgcca gcggggttca cgctccgcct cgtcttttcc ggcgtgcccc
      601 tcgggtcggc gttgcgcggc ttcgccggcc tctcgtattt tctctttcgc gacagcgacg
      661 ctgcgcccgt cacgctcgag gccgcgagcg acggcgtccc actcggcggc tacgtgcacc
      721 gagacgcgtg gggctttcac ccgtttcgga tcgcaacggc cgcgaacgcc ggacgcaccg
      781 ctcgcgtcga gctcgcgctt cacgcgggtg aaacgcctca acgcgacttc tgcttcacgc
      841 tcgaggcgct cgaatgagca cgccctcgcg cccggagcgc tcggatttcg ccatcgcggg
      901 cgcgctcggc gcaggctacc tcgccctctt gctcggcagc gcccactcgc tcggctacac
      961 gcgcgacgaa ggtttctaca cctacgccgc gcgcgtgctc gagctctggt tcgaccgcgt
     1021 cgccaacgcc ggcagcgccg cgttcgatcg cacgaacatc gaccacttct ggaatccgat
     1081 tcacgagcac ccggggctgc tgaagctcct gttcgccctt tcgcaccact tcttgcacga
     1141 gcgctggccg ttgattggcg agtcgggcac ggcgtatcgg ctgccgggga tgttgctggg
     1201 cggactggcg gtcgccgtgc tctatctctg gggccgtgaa gccgtgggac gcacggcagg
     1261 cgtcgtgtcg gcgctgcttt tcgcattgat gccgcgggtc ttctttcact cgcacctcgc
     1321 gtgtctcgac gtggcggtga ccgcgatgtg gctcgtcacg agctacgtct acctgcgcgc
     1381 ctttcgcgac aaccgcctcg gcgccgtgct cggcgtgggc gtgctgtacg gcttctttct
     1441 cgatacgaag cacaacgcct ggctgtttcc gttcgcgctc gtcgtgcacc tcgtcgcgct
     1501 gcgcctgctc gaaagattca ggaagttgcc gcgcaccgga ccgcgcgtgc cctgggcgct
     1561 gctctcggtc atcagcgtcg gcccgctcgt gctctgggtg atttggccgt ggctctggtt
     1621 cgacaccagc gaacgcgtgc gcgcgtggtt cgaattccac ctgcagcacg actactacaa
     1681 catggagttt ctcgggcgga cgtattggaa gccgccgatg ccggcgctct acgcgcccgt
     1741 gatgacgctc gccaccgtgc ctgcgatcac gctcgctttg tttgcgctcg ggctgttcga
     1801 aaccgggcgc gcgctcgtgc gcggcgacgg cagtgaacgc gttgcgcacg acgcgctgtg
     1861 gctcgtcggg ctcggcctga gctacgcgcc gtggctctcg cagagcacgc cgattttcgg
     1921 cgggaccaag cattggttac cggcgtatcc gttcctgtgc ctgatcgcgg gacgtggttt
     1981 tgcgctggca tcggcgcgcc tgcgcgagct ctgggccgag cgcttccaaa aacccgagct
     2041 cgtgccgccc gtgctcgcgg cgctgtgcct tgcgggaccg ctggcgatga cgctgcattc
     2101 gcacccctgg ggtctcacgt tttacacgcc cctggcgggc ggcgcgccag gagcggcaag
     2161 tttggggctc aaccgcacgt tctggggtta cgccacgggt gcgctcgcgg acgagctgaa
     2221 cgagctcgcg ccgccgaacg cggcagttta cgtgcatgac acagcgctcc agagctggga
     2281 gctttttcgc gaggacgggc gcatccgtgc cgatctggcc ggcacgttgt cgctcccgag
     2341 ctccagcctc gctctctatc accacgagcc gcacatgcgc cgcgtcgagt tcgagacctg
     2401 ggtcgtctat ggcacggtaa gccccgtcgc gattggcagt tacgacggcg tgccggtagc
     2461 ttggctctac gcgcgcgacg aattgcgtcg gcggtagcgt ccattgccac tggagcgaaa
     2521 gccgggcgag ggaatcttcg ggcggcgcga gcggtaatat ttcgtcgagc ggtaccgctg
     2581 agccgcaact cgcgcctcac gcgtcccgat tgtatcaacg atggcgtcct tcgcgttgcg
     2641 gcagttgccc aaaggcggac ccagactcat ccttaacggg atgacgcttc gacgtgtgct
     2701 cgccgcgttt ctcgcggtcg ccttcgcggg cacctttgcc ccggcgcgcg cccacgcgca
     2761 gaacggcgag gacggctggt tcgagggcgc cgacggcacg ccgcagcaat tgccgccgag
     2821 caccgcaccc gcgcaggcgg ccgctccagc accggccgct gcaccaccag ccagccccgc
     2881 tgagcccaac atcccggcca cgcccgccgc accggccgct cccgcacagc cccagtcgct
     2941 cgcgccaagc cccctttacg atcgaggcac ggcgaccccc gccggcacgc cggctccggc
     3001 ggcggctgac gcggacgatc aggatccgc
//
LOCUS       DATIML010001235         6713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4301712, whole genome shotgun sequence.
ACCESSION   DATIML010001235 DATIML010000000
VERSION     DATIML010001235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6713
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4301712"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VLJ38_21335"
     CDS             complement(<1..220)
                     /locus_tag="VLJ38_21335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42144.1"
                     /translation="MQTKLVHWVAGCLMVLGAGCGAAEQSGSEQVGVVGEALAGSNAH
                     GVLPAGLPARLGVGLFEGPGGTWMKTSGA"
     gene            complement(518..997)
                     /locus_tag="VLJ38_21340"
     CDS             complement(518..997)
                     /locus_tag="VLJ38_21340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42145.1"
                     /translation="MTAMLGTFGGCMPECETRTPALYTQYALESESSDSVHCFYDCLR
                     LSGEAQRDTCLSQCDGVAVNVTREPCTPDAPRLCTYEPVPRAATMPGDDGSELAAAII
                     GGIFKVASAALVSGRTAHRAPERHHESTASRAKPDRRSYVVERPRPDPQRKPRTPPT"
     gene            complement(1127..1597)
                     /locus_tag="VLJ38_21345"
     CDS             complement(1127..1597)
                     /locus_tag="VLJ38_21345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42146.1"
                     /translation="MQNLAPTAERRRGLRLPTRCWALLRNRERSIYARAVELSATGVV
                     LEIVGRRHPVDFRVTQRFELDLFVPGATTPIHVTVRPVRAVGSHEAFELVQASSVDRL
                     TLAEHLDHLLAVRRYRAGRPRVRRAFGRRMSPGTAWKRLLLPSAEQRAWAAAAH"
     gene            complement(1937..2845)
                     /locus_tag="VLJ38_21350"
     CDS             complement(1937..2845)
                     /locus_tag="VLJ38_21350"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HSU42147.1"
                     /translation="MPRAKTPKPRSHPPHAALFDSYSLLFRAFHALPPLTTKAGEPTS
                     ALYGLCSVVIRVLREERPARLAFALDAKTRTFRAERYAGYKAGRARTPSALSRQIERL
                     PELLGAFEAPLFCVPGFEADDVLATLCHRLEREEERSVVVSGDRDLLQVVSPRTNVLF
                     VGARQQAPVLFDEAAIEARFELPASKLPSYVALVGDSSDNLPGVPGIGARTAAKLVAE
                     HGSIAGLIENLDRIATPKLREALTRHREQALLTEELATLRRDVPLAEGPLAAPLTAAA
                     RARLERLFTELEFKSLITRLDALGFP"
     gene            2864..5860
                     /locus_tag="VLJ38_21355"
     CDS             2864..5860
                     /locus_tag="VLJ38_21355"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSU42148.1"
                     /translation="MFLPDVTTDRTLTAGHVSTAGYLGIAGLDELGDASSLLSSRWSR
                     DNVVTAHPARLYDGRVLEPIGPDTLEYLVQAVAAERGRFEVGAGRMGVITWDVTCQDG
                     AGAFVLQIPVALDEMGAHGRAKRDVPRLNFENARYFRERGLGRFVLEPEYSLTLAGGV
                     PAASFRTLPAHRPLTFGAGAVRVRHPEGWIASLGPRGTAELLAEIVAALVYHYDPELE
                     GGTALTDVFINDADFVAERRSDGTFDLRLTAARRREPGVAPNLLLLYLLQLMAYEDWS
                     VNGGLTGLPVLVSNPSVTFEGVVRGLRYRYRDLGASDEAALRDARRWIAEFARSTEGR
                     AYRPWAERFLDGRLPLRFGADPRERWWRLYPLERQQRLLELRGKAEPASGAADSARAL
                     KSFLDRLRREIGRPPADAPELSRLNELSRDGMLALLRDAKVDEPVRERVAAEIFAHWP
                     ERNLDRLLALVPGARGLRRLKSRLSFGFTFSADEECTLKSLEPAAKTSAAERPLANHE
                     LCTTLELPPSLAAAAARCFPTFEAYMDAALHDPAWGYYGHAVVIGKDGHFDTHPEELS
                     PHYGRWVLSCAFKAWRELVEHGELSEGDRFPIIEFGAGNGRLARDVLAAVAQPNSELR
                     GADPAAFETFAARLEYRIYEMSESLRARQRELVGERAVIAAGDARAPRATLQRDFPDG
                     IRGFVVTNELPDAFGVHKVVLAADGRALAALVVPRVEREVDALVGPDVAGRITVADAT
                     LRETFGLAQNVAERYLDELTFGAVMRAFAGLAPDERARGLACLWFEEMYVPVAIVPAL
                     AAHLAKNARQYAIALAAETSGVVTYVNLHASRFIQELGAVLRAGFVVTIDYGNSTWEL
                     VQAARHGEFPFRVYGDQRADVPRPNDPYAAPGTQDMTADVNFTDLANAGEAAGLKLVH
                     YGPERDLAGAELPALIRAAAEEPRVAKLLGHPGFQLLVLGTRESSLLSTPLTMLSPLQ
                     AREHDVSKSDRPRIAELERRLLEGAP"
     gene            complement(6174..6386)
                     /locus_tag="VLJ38_21360"
     CDS             complement(6174..6386)
                     /locus_tag="VLJ38_21360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42149.1"
                     /translation="MAPTLVPPVEVVPPVLGDEPPVLPPLPGLVLPPEPLALEPPLPG
                     VVVPPLPTLVPAPEPGEPGPLEPGGA"
     gene            6376..>6713
                     /locus_tag="VLJ38_21365"
     CDS             6376..>6713
                     /locus_tag="VLJ38_21365"
                     /inference="COORDINATES: protein motif:HMM:NF019255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1587 domain-containing protein"
                     /protein_id="HSU42150.1"
                     /translation="MGANCTPSVKATSQIPRLTNAQYDRTIRDLLGVTNLTAANNVAP
                     STLLAADQDGGLTDLAWANYKDLADKIATQVMADTTLKANFIKCTPAAGDTSCFHQTI
                     IDFGRRAFRRA"
BASE COUNT         1089 a         2246 c         2305 g         1073 t
ORIGIN      
        1 ccgcgccgct cgttttcatc caggtgccgc cgggtccttc gaataagccg acgccgagcc
       61 gcgccggcaa gcccgcgggc agcacgccgt gcgcattgct accggcgagc gcttcaccga
      121 ccacgcccac ttgctcgctg ccgctctgtt cggccgctcc gcagcctgcg cccaggacca
      181 tcaaacaacc agccacccaa tgaacgagct tcgtctgcat gcgcatcctt cctcttctcg
      241 cctcgacgcg accctgctcg cgccgccgac gaaccgacca gggttcgcga tcaccgcgac
      301 tgaggccacg acgcggtgcg gcgaacgtga atcgcagatt ccgccgacgc gcccatcgct
      361 gcgcggcgcg tccggtgagc acgcgtatat cggcgctcga tacgccacgg tggcgggtct
      421 ggggcttttt accccctggc aagcgcggaa tttacagagt cgacgtggga cggatttcgg
      481 cggaggcagc cgatttctcg acgcgcgatc gctctgttca cgtcgggggc gtgcggggct
      541 tgcgctgcgg gtcgggtcgc ggtcgctcga cgacgtaact gcggcggtcg ggcttagcgc
      601 gcgaggctgt cgattcgtgg tgtcgttcag gtgcgcggtg tgcggttcgt ccggacacca
      661 gcgcggcgct cgccactttg aagatcccgc cgatgatcgc ggcggctagc tcggagccat
      721 catcgcccgg catggttgca gctcggggga cgggctcgta cgtgcagagc cggggtgcgt
      781 ccggcgtgca cggttctcgg gtgacgttca cggccacgcc gtcgcactgc gaaaggcacg
      841 tgtcgcgctg agcttcgccg gacaacctca ggcaatcgta aaagcaatgc acgctgtccg
      901 agctttccga ctcgagcgcg tattgcgtgt aaagcgctgg tgttcttgtt tcgcactcgg
      961 gcatgcagcc gccgaatgtt cccagcatgg ccgtcatggc gccgaaggcg gcaagccgtc
     1021 gtatcacccg catgcgcgca ctcgagcaag gcgcataccc gggcgtgcgg cggggtaagt
     1081 cctcgaaagt acgtgctggt tcgacggcga gtgtcgccgc ggagcgtcag tgtgctgccg
     1141 ccgcccaggc tcgctgctcg gcggagggca aaagcagtcg cttccacgcg gtgcccggcg
     1201 acatgcggcg gccgaaggcg cggcgaacgc gtggtcggcc ggctcggtag cggcgaacgg
     1261 cgagcaggtg atccaaatgt tcagcgagcg tcaggcggtc gaccgagctt gcctgcacga
     1321 gctcgaaagc ttcatgcgag ccaacggccc ggaccggacg gacggtgacg tggatcggcg
     1381 tcgtcgcgcc gggcacgaag agatccaact cgaaccgctg cgtcacccgg aagtccacgg
     1441 ggtgacggcg cccaacgatc tcgagcacca cgcccgtcgc cgagagctcg acggcgcgcg
     1501 cgtaaatgct gcgctcgcgg ttacggagca gtgcccagca gcgtgtcggc agccgcaacc
     1561 cacgccggcg ttcagccgta ggcgctaagt tttgcatgcg tgacagcatg cagatcccgc
     1621 gccggcccgc gctggggcgt atcagccgat ttaagcgtgc gtattcgggg cgcgacgtcc
     1681 caaaatgcag aatcgccacg ccgccgctgc ttcccagatg agcctagctg ggcgcagccc
     1741 agcccgacac caggcgtgag tcttggaaga acagatcacg atcggctcga gtcgcggtaa
     1801 cccgaacgcg acaagccggc gaggccggac gcgggctcct tcccgctcgc tcggatcgcc
     1861 gcacgtcagc ggccgagatt aggccgacgg ggctgcagaa aaactcaacc cttcattcac
     1921 gcaacgacgc ttcagcctac ggaaagccga gcgcgtctag ccgcgtgatc aggctcttga
     1981 attcgagctc ggtgaacagg cgctcgagtc gcgctcgcgc ggcggccgtg agcggcgcgg
     2041 cgagcgggcc ctcggcgagc ggcacgtcgc gtcgcaacgt cgcgagctcc tcggtgagca
     2101 gcgcctgttc gcgatgccgc gtgagcgctt cgcggagctt gggcgtggca atccgatcga
     2161 gattttcgat caacccggcg atactgccat gctcggcgac gagctttgcc gccgtgcgcg
     2221 ctccgatccc gggcaccccg ggcagattat cggagctgtc accgacgagc gcgacgtaac
     2281 ttggcagttt cgaagccggc agctcgaaac gcgcttcgat cgcggcctcg tcgaacagta
     2341 ccggcgcttg ctggcgcgct ccgacgaaga gcacgttcgt gcgtgggctc acgacctgca
     2401 agaggtcgcg atcgccgctc acgacgaccg aacgctcctc ttcgcgctcg aggcggtgac
     2461 acaaggtcgc gagcacgtcg tccgcctcga agcccggcac gcagaagagc ggcgcctcga
     2521 acgcgccgag cagctccggc aggcgctcga tttggcgcga gagcgcggac ggcgtgcgtg
     2581 cgcggccggc tttgtagccg gcgtagcgtt cggcgcggaa agttcgagtt ttggcgtcga
     2641 gggcgaaggc gaggcgcgcg ggacgctcct cgcgcaggac gcgaatgacg acggaacaca
     2701 agccgtagag cgccgaggtg ggctcgccgg ccttggtcgt gagcggcggc agcgcgtgaa
     2761 aggcacggaa aagcagggag tagctgtcga atagcgccgc gtgcggcggg tgggagcgag
     2821 gctttggggt tttcgcgcgc ggcatggttc ggcttcagcg agtatgttcc tccccgacgt
     2881 gacgaccgat cgaacgctga cggcggggca tgtgtccacg gcagggtacc tcggcatcgc
     2941 cgggctcgac gagctcggtg acgcatcgtc gctgctgtcg agtcgctggt cgcgggacaa
     3001 cgtcgtcacg gcccatcccg cgcggcttta cgacgggcgc gtgctcgagc cgatcggccc
     3061 ggacacgctc gagtacctcg tgcaagccgt cgctgccgag cgcggccggt tcgaggtcgg
     3121 tgcgggccgc atgggcgtca tcacgtggga cgtgacctgc caagacggag caggcgcgtt
     3181 cgtgctgcag atccccgtcg cgctcgacga aatgggtgcc cacggtcgcg ccaaacggga
     3241 cgtgccacgg ctgaatttcg agaacgcgcg ctatttccgg gagcgagggc tcggccgctt
     3301 cgtcctcgag ccggaatatt cactgacgct cgcgggcggc gtacctgccg cgagcttccg
     3361 caccttaccg gcacaccgcc cgctcacgtt cggggccggc gcggttcggg tgcgtcaccc
     3421 ggagggttgg atcgcctcgc tcggcccgcg cggcacggcc gagctcctgg ccgagatagt
     3481 ggcggcgctc gtctatcact acgacccgga gctcgagggc ggcaccgcgc tcacggacgt
     3541 attcatcaac gacgctgact tcgttgccga gcggcggagc gacggcacgt tcgacctgcg
     3601 gctgaccgcc gcgcgccgcc gcgagccggg cgtcgctccg aatttactct tgctctacct
     3661 gcttcaattg atggcctacg aagattggag cgtcaacggc gggctcacgg gcctgcccgt
     3721 gctcgtctcg aatccgtccg tcaccttcga aggcgtcgtg cgtggcctcc gctatcgtta
     3781 tcgcgacttg ggcgcgagcg acgaagcggc gttgcgcgac gctcggcgct ggatcgcaga
     3841 gttcgcgcgc tcaaccgaag ggcgcgcgta tcggccctgg gcagagcgct tcctcgacgg
     3901 ccgcctgccg ctccgtttcg gcgccgaccc gcgcgaacgc tggtggcggc tctatccgct
     3961 cgagcgtcaa cagcgactgc tcgagttacg cggtaaagcc gaaccggctt cgggtgctgc
     4021 cgattcggcg cgcgcgctca agagcttcct tgaccgtctc agacgcgaaa tcgggcggcc
     4081 gcccgcggac gctccggaac tctcgcgcct gaacgagctg agtcgagacg gcatgctcgc
     4141 gctcctccgc gacgcgaagg tcgacgagcc cgtacgcgaa cgcgtagcgg ccgagatttt
     4201 cgcacactgg cccgagcgca acctggatcg gctgctggcg ctcgtcccgg gcgcgcgcgg
     4261 actccggcgt ctcaagagcc ggctctcctt cggattcacc ttttccgcgg acgaggagtg
     4321 cacgctgaag tcgctcgagc ccgccgcaaa gacgagcgcg gccgagcggc cgctcgccaa
     4381 tcacgagctc tgcacgacgc tcgagctccc gccgtcgctc gcggccgccg cggcacgctg
     4441 cttcccgacc ttcgaggcct acatggacgc ggcgctgcac gatccggcgt ggggctacta
     4501 cgggcacgcc gtcgtcatcg gcaaagacgg gcacttcgac actcaccccg aagagctcag
     4561 cccccactac ggacgctggg ttctgtcgtg tgccttcaag gcgtggcgcg agctcgtcga
     4621 gcacggtgag ctctcggaag gcgaccggtt tcccatcatc gagttcggtg ctgggaacgg
     4681 acggctggcg cgcgacgtgc tcgctgccgt cgcgcagccg aacagcgagc tccggggcgc
     4741 ggacccggcg gcgttcgaaa cgtttgcggc gcggctcgag taccgcattt acgagatgtc
     4801 cgagtcgctg cgcgcgcggc agcgcgagct cgtcggtgaa cgggctgtca tcgccgcggg
     4861 tgacgcccgc gcgccgcgcg cgacgctcca gcgggatttc ccggacggca tccgggggtt
     4921 cgtcgtcacg aacgagctcc ccgacgcttt cggtgtgcac aaggtcgtgc tcgcggcgga
     4981 cgggcgcgcg ttagcggcgc tcgtcgtgcc gcgcgtcgag cgggaggtcg acgcgctcgt
     5041 ggggccggac gtcgccgggc gtattaccgt cgccgatgcg acgttgcgcg agacgttcgg
     5101 cttggcacag aacgtcgccg agcgttacct cgatgagctg acgttcggcg cggtcatgcg
     5161 cgctttcgcg ggcctcgcgc cggacgagcg cgcgcgggga ctcgcctgcc tctggttcga
     5221 ggaaatgtac gttcccgtgg cgatcgtgcc ggcgctcgcg gcacaccttg ccaaaaacgc
     5281 gcgacaatac gcgatcgcgc tcgctgccga gacctcgggc gtcgtcacct acgtgaacct
     5341 acatgcgagc cgcttcatcc aggagctggg cgcggtgctg cgtgccggct tcgtcgtcac
     5401 catcgactac ggcaactcca cgtgggagct cgtgcaggcc gcacgtcacg gcgagtttcc
     5461 ttttcgggtt tacggcgacc agcgcgccga cgttccgcgg ccgaatgatc cgtacgccgc
     5521 gccgggcact caagacatga ccgcggacgt gaatttcacc gacctcgcga acgccggcga
     5581 agcggcgggc ctgaaactcg tccactacgg gcccgaacga gatttggctg gtgccgagct
     5641 gccggccctg attcgtgccg cggcggagga gccgcgggtt gcgaaattgc tggggcaccc
     5701 ggggtttcaa ctgctcgtac tcgggacgag agaaagctcg ctcctctcga ctcccctgac
     5761 gatgctgtcg ccgcttcaag cgcgcgagca cgacgtgtcg aaatcggacc ggccgcgtat
     5821 cgccgagctc gagcgacggc tcctcgaagg cgctccttaa aggagagcgc tatcgatcgg
     5881 gaacggagca agacggactt cgcttcggcg cagggtggaa aattatcgca acgaaggagc
     5941 gcaagcacct gaaatcatag gcgcagcgcg ctgcgcggaa aattgcacgt cgaagtggcc
     6001 gcaaagatcg gctcggacgg tgggggtcaa tttatcgagc accctgcggg cataacaccc
     6061 tcgacggttc acttgcgcga aacaccaacg caccgtgagg tcagtgtcat gtacatgtgg
     6121 aggagtgcag tatgcgtagc agccacgctc gccgtgggct gcacggcgga cgttcacgcg
     6181 ccccctggtt ccagcggccc cggttctccc ggttccggcg ccggaacgag cgtggggagt
     6241 ggcggcacga cgactcctgg cagtggcggt tccaaagcga gcggctccgg cggcagcacg
     6301 agcccgggca gcggcggtag caccgggggc tcgtcgccga gcacgggcgg cacgacttcg
     6361 accggcggca cgagcgtggg tgccaactgt actccgagcg tcaaagccac ctcgcagatc
     6421 ccacgcctca cgaacgcgca atatgaccgc acgattcgcg atctgctcgg cgtgacgaac
     6481 ctcacggcag cgaacaacgt cgcgccatcg accttgctcg cggcggacca agacggcggt
     6541 ctcactgacc tcgcttgggc gaactacaaa gacctcgccg acaagatcgc gacgcaggtc
     6601 atggccgaca cgacgctgaa ggcaaacttc atcaagtgta caccggcagc cggtgacacg
     6661 agctgcttcc atcagacgat catcgacttc ggacggcgtg cgttccgccg ggc
//
LOCUS       DATIML010001236         2684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2278287, whole genome shotgun sequence.
ACCESSION   DATIML010001236 DATIML010000000
VERSION     DATIML010001236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2278287"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VLJ38_21370"
     CDS             <1..322
                     /locus_tag="VLJ38_21370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42151.1"
                     /translation="WATTGALAVGATVTGIVTLSKNSKLADDRSRLEVSDAEIKDQAS
                     HVRTLAIVTDVLTAGAVVAGGVSLWLTIDHFSGKKARAAGSLGRSTFRVGVAPRGVRL
                     ETSF"
     gene            325..1941
                     /locus_tag="VLJ38_21375"
     CDS             325..1941
                     /locus_tag="VLJ38_21375"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU42152.1"
                     /translation="MPRITLLHGRTTRHAGARRAFRSLLAAALVVPLAGCTLVVDTSQ
                     REPCSTHAECTARYGEPSACVESSCVKLLTEECTQVLPEGVLKEENTILFGFMGALTG
                     DFASYGTPTKEGAELAFDEIQANSNGIPGAAGERQRHVGMLVCDEGTDPKKVARHLAE
                     DVKVPAIIGPSFSGVTLDVLDVTVPDQTLVISATATSPALTNVADNGLFWRTCPSDVV
                     QTELMKYLLVELTGDLKNAGSIPEQREPKVAILYKDDSAGRGLQLGATTMPDRSQAAP
                     PVVSGYQDKYPNPDNLDSVDWSSHADGVVSYGPDVIMALGTSEFAQYLMPRIEAKWSL
                     DAKPWYMLPEGDRVGQLTDFVGQNPQFQLEQRIIGTAPGARQSKLYNNFKDRFKGQFS
                     QRPPGNLAEFAYDAAYLLVYAVGISQRPYPTGPELADALTHVSCPAAIAPTPVGPGGF
                     LDNFKQASMDGACIDFEGASGPLDFNNATGEAVGDIAMWCLQNQGNGPSYDPPLKSYY
                     SAAEDRIVWKNDTPIDFTQRDWCNANSESM"
     gene            1964..>2684
                     /locus_tag="VLJ38_21380"
     CDS             1964..>2684
                     /locus_tag="VLJ38_21380"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HSU42153.1"
                     /translation="MTETLAKPLPIVVQYSKLRVTVSVGPDSGAVRELVSNPLRVGSS
                     SDNDLALTDSTVSRRHCSIEPLPSGVRIRDEGSTNGTFIGHLRVYDVVVGGTVQVRVG
                     DSVLTIEPLAEVVAREQATAERFCDLLGRSARMRELFADLARIAPTDVTVLIEGETGT
                     GKELVAESVHAASERRDGPFIVFDCSAVAPTLAESELFGHERGAFTGATGTRPGVFEQ
                     ADGGSIFLDELGELPKDLQPKL"
BASE COUNT          479 a          879 c          900 g          426 t
ORIGIN      
        1 ttgggcgacc acgggggcgc ttgccgtcgg cgccacggtc acgggcatcg tcaccttgtc
       61 gaagaattcg aagcttgccg acgaccgcag ccgactcgag gtgagcgacg ccgaaatcaa
      121 ggatcaggcg tcgcacgtgc gcacgctcgc gatcgtgacg gacgtgctca cggccggcgc
      181 cgtggtggcg ggcggcgtga gtttgtggct gaccatcgat catttctcgg gcaagaaagc
      241 ccgcgccgcg ggttcgctcg ggaggtcgac gttcagagtc ggggtggcgc cacgcggcgt
      301 gcgtttggag acgagctttt gagcatgccc cgcatcacgc tgttgcacgg tcgcaccaca
      361 cgtcacgccg gcgcgcggcg cgcgttccgc tctttgctgg cggcggcgct cgtcgtgccc
      421 ctcgccggct gcacgctcgt cgtcgacacg tcgcagcgcg agccgtgctc gacgcacgcc
      481 gagtgcacgg cgcgctacgg cgaaccgagc gcgtgcgtgg agtcgagctg cgtgaagctc
      541 ttgaccgagg agtgcacgca agtgctgccc gagggcgtcc tcaaggagga aaacacgatc
      601 ctcttcggtt tcatgggcgc cctcaccggt gatttcgcga gctacggcac gccgacgaag
      661 gaaggcgcgg agctcgcgtt cgacgaaatc caagcgaact cgaacggcat cccgggcgcc
      721 gcgggtgagc gccagcgcca cgtcgggatg ctcgtgtgtg acgagggcac cgatcccaaa
      781 aaggtggcgc gccatttggc ggaggacgtc aaagtccccg ccatcattgg accttcgttc
      841 agcggcgtca cgctcgacgt actcgacgtg acggtgcccg accaaactct cgtcatctct
      901 gcgacggcga cgagccccgc tctcaccaac gttgccgaca acgggctctt ctggcgcacg
      961 tgcccgtccg acgtcgtgca gaccgagctc atgaagtacc tgctggtcga attgaccggc
     1021 gacctgaaga acgccggcag cattcccgaa cagcgcgagc ccaaggtcgc cattctgtac
     1081 aaggacgaca gcgcgggtcg cggcctgcaa ctcggcgcga cgaccatgcc cgaccggagc
     1141 caagcagcgc cgccggtcgt gagcgggtat caggacaagt acccgaaccc ggacaacctc
     1201 gatagcgtcg attggtcctc acacgccgac ggcgtcgtga gctacggccc cgatgtgatc
     1261 atggcgctcg ggacgagtga atttgcgcag tacctcatgc cgcgcatcga ggcgaagtgg
     1321 agtttggatg cgaagccctg gtacatgctg cccgagggcg atcgcgtcgg gcagctcacg
     1381 gacttcgtcg ggcaaaaccc gcagtttcaa ctggagcagc gcatcatcgg tacagcgccc
     1441 ggcgcgcgcc aatcgaagct ttacaataac ttcaaggatc gtttcaaagg tcaattcagc
     1501 cagcggccac ccggaaacct cgccgaattc gcgtacgacg ccgcctacct gttggtctac
     1561 gcggttggca tcagccagcg gccctatccc acgggcccag aactggcgga cgcgctgacg
     1621 cacgtctcgt gcccagccgc catcgcgccc acgcccgttg gtccgggcgg tttcttggac
     1681 aacttcaaac aggcgtcgat ggacggagcc tgcatcgatt tcgagggcgc gagcggcccc
     1741 ttggatttca acaacgcgac cggcgaggcc gtcggcgaca tcgcgatgtg gtgcttgcag
     1801 aaccagggca acggcccaag ctacgatccc ccgctcaaga gctactactc cgcggccgaa
     1861 gatcgcatcg tgtggaagaa cgacacgccg atcgacttta cgcagcggga ttggtgcaac
     1921 gcaaactcgg agagcatgtg aggcgtactc ggcgggccca ctcatgaccg agacgctcgc
     1981 caagccgctc ccgatcgtcg tccagtactc gaaactgcga gtgacggtga gcgtaggccc
     2041 cgacagcggg gccgtccgtg agctcgtgag taacccgctg cgcgtcggga gctcgtcgga
     2101 caacgacctc gcgctgacgg acagcaccgt ttcgcgccgt cactgctcga tcgagccgct
     2161 gccgtcgggc gtgcgcatcc gcgacgaagg ctcgacgaac ggcacgttca tcgggcattt
     2221 gcgggtctac gacgtggtcg tgggcggtac ggtgcaggtg cgcgtcggcg acagcgtgct
     2281 cacgatcgag cccctcgccg aggtcgtcgc acgggaacaa gcgacggcgg agcgcttctg
     2341 cgacttgctc ggccgctcgg cgcgcatgcg cgagctgttt gcggatctgg cgcgcatcgc
     2401 gccgaccgac gtgacggtgc tgatcgaagg cgagaccggg acgggcaagg agctcgtcgc
     2461 cgagtcggtg cacgccgcga gcgagcgccg tgacgggccg ttcatcgtgt tcgactgcag
     2521 cgccgtggcg ccgacgctcg ccgagagcga gctcttcggc cacgaacgcg gcgcgttcac
     2581 gggcgcgacc ggcacgcgtc cgggcgtgtt cgagcaagcg gacggcggca gcatcttcct
     2641 ggacgagctc ggtgagctgc cgaaagactt gcaaccgaag ctac
//
LOCUS       DATIML010001237         2446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4589526, whole genome shotgun sequence.
ACCESSION   DATIML010001237 DATIML010000000
VERSION     DATIML010001237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4589526"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..679)
                     /locus_tag="VLJ38_21385"
     CDS             complement(17..679)
                     /locus_tag="VLJ38_21385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42154.1"
                     /translation="MDESSFEFPRRTARPLWTRARVLGAAAGTLVRAMRLLVAPSRER
                     GSRLEGSEDPRVVVTMGLAVVDDTDLTARPALEALLELTLVLRDGYDSECQRPFTAAR
                     AELCASCREHARRQTLLARRLAARLAALGTPVEPSVRAPSAAVEASVAPLEAELHRLL
                     STHRQILNEAKAFGRRQAGAARTTQQEIVVADVVATNRRQAATLLRCLIEYRGSSSPL
                     GE"
     gene            complement(763..2061)
                     /locus_tag="VLJ38_21390"
     CDS             complement(763..2061)
                     /locus_tag="VLJ38_21390"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase"
                     /protein_id="HSU42155.1"
                     /translation="MTIHRPLSTAVVSIATTAAAFGWLTWPAHADTSRTESAASDEGS
                     IRPFRVNFPSQALSDLRRRVLSTRLPDSELVQDHSQGVKLATVQKLARYWGTDYDFHR
                     CEAKLNALPQFVTKIDGVDIHFIHVRSKHAGALPLIVTHGWPGSIIEQLKIIDPLTNP
                     TAHGGSAEDAFDVVIPSLPGYGFSGKPAALGWDPARIARAWVVLMNRLGYKRYVAQGG
                     DWGNAVTEQMALLAPPGLLGIHTNMAATVPEDVAKALQFGSPPPPRLSAEEKRAWDQL
                     DFFYKNGLGYALEMAHRPQSLYAIADSPVGLAAWILDHDARSEELIARVFDGQSEGLT
                     RDDILDNITLYWLTNTAVSSARLYWENKLDFFAPKHVTIPVAVSVFPDEIYAAPRSWA
                     RQAYPKLVYYNRLAKGGHFAAWEQPASFTAELRAAFKTLR"
BASE COUNT          404 a          801 c          832 g          409 t
ORIGIN      
        1 ccatcgcggc tccgagctac tcaccgaggg gggagctcga gccgcgatat tcgatcagac
       61 agcgtagcag cgtcgcagct tgacgccggt tcgtggcgac aacgtccgcg accacgatct
      121 cctgctgggt ggtccgagcc gcccccgctt ggcgcctgcc gaacgccttg gcttcgttca
      181 aaatctgtcg atgcgtcgaa agcagccggt gaagctcggc ctcgagcggc gcgactgagg
      241 cttcaactgc cgcgctcggc gcgcgcacac tcggctcgac tggagttccg agcgcggcga
      301 gccgcgctgc gagcctgcgc gcgagcaacg tctgccgtcg ggcgtgctcg cgacagctcg
      361 cacaaagttc cgcgcgggct gccgtgaaag gccgctggca ctcgctgtcg taaccgtcgc
      421 gcagcaccaa agtgagctcg agcagagcct cgagagccgg cctcgcagtc aggtcggtgt
      481 cgtcgacgac ggcgagaccc atcgtgacga ccacgcgtgg atcctcgctg ccttcgagcc
      541 gcgagcctcg ctcgcgcgac ggcgcgacga gcagtcgcat ggccctgacg agggtgcccg
      601 ctgccgcacc gaggacccgc gcgcgcgtcc agagcgggcg tgccgtacgc ctgggaaatt
      661 cgaaagacga ttcgtccatg gccatgcctt tgcaaatgcc ggctcgcgcc gatcgacgcg
      721 cgagccggcg ttacgcacgc gctgacgcgc gtccacctgc cgttaacgca gcgtcttgaa
      781 ggcggcgcgg agctccgccg tgaacgacgc gggctgctcc caagccgcga agtgaccgcc
      841 tttcgcgagc cggttgtagt agacgagctt ggggtacgct tggcgcgccc agctgcgcgg
      901 agccgcgtag atctcgtccg ggaagacgct gaccgccacc ggaatcgtga cgtgcttcgg
      961 ggcgaagaag tcgagcttgt tctcccaata gagccgcgcc gacgagacgg cggtattcgt
     1021 cagccagtag agcgtgatgt tgtcgaggat gtcgtcacgc gtgaggcctt ccgactgtcc
     1081 gtcgaagacg cgggcgatga gctcctcgct gcgcgcgtcg tggtcgagga tccaagccgc
     1141 caagccgacc ggtgaatccg cgatggcgta caagctttgc gggcggtgcg ccatttcgag
     1201 cgcgtagccg aggccgtttt tgtagaagaa gtcgagctga tcccaggctc gcttttcttc
     1261 ggctgaaagg cgcggcggag ggggactacc gaactgcaaa gccttggcga cgtcctcggg
     1321 aacggtggct gccatgttgg tgtggatacc gagcagtccg ggcggcgcga gcagcgccat
     1381 ctgttcggtg accgcattgc cccagtcgcc gccctgcgcg acgtagcgct tgtagccgag
     1441 gcggttcatg agcacgaccc aggcgcgcgc gatgcgcgcc ggatcccagc cgagcgccgc
     1501 cggcttgccc gaaaagccgt agccgggcag cgacgggatc acgacgtcga aggcgtcttc
     1561 cgcgctgccg ccgtgtgcgg tcgggttcgt gagcggatcg atgattttca gttgctcgat
     1621 gatcgaaccg ggccagccgt gcgtgacgat gagcggcagc gcgcccgcgt gcttcgagcg
     1681 cacgtgaatg aagtggatgt ccactccgtc tatcttggtc acgaactgcg gaagcgcatt
     1741 gagcttggcc tcgcagcggt gaaagtcgta gtcggtgccc caataacgcg caagcttctg
     1801 gaccgtcgcg agcttcaccc cttgcgagtg atcctgaacc agctcgctgt cgggcaagcg
     1861 cgtcgaaagc acgcggcggc gaagatcgga gagcgcctga ctggggaaat tgacccgaaa
     1921 cggccgaatc gagccctcgt cggaggccgc gctttcggtt cgtgaggtgt ctgcgtgcgc
     1981 cggccaagtc agccaaccga atgcggcggc agtcgtggcg atcgaaacta cagcagtaga
     2041 taacgggcgg tggatggtca tattcgtctc ctcgaattct cggagcgcgc tacttgcgaa
     2101 tgccgtgccg caccggtgag cgccctgacc ggcccccgcg ttcgtccgcg cggcggcttc
     2161 agcttccaaa cagtgtttgg agaccgtcag cgtgacggca gctggacacg cgaacgctcg
     2221 cgccgcacgc ggcaagtcat ctcgttgccc gagcaacacg gccgcgcgca gcgtcgccgc
     2281 gacggcatgg gcgttgctta gccctccacc acagcctgcc atgactctcg cgagcatctt
     2341 gatccgtgcc ggtgcgcgcc gcgctcaggc atcagtgaac cccgatgcgg cttcagcgcg
     2401 gcgcgccgcg ctcgtcgagc gttacgtgcg ctgccgtgcc gccacc
//
LOCUS       DATIML010001238         2622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3724848, whole genome shotgun sequence.
ACCESSION   DATIML010001238 DATIML010000000
VERSION     DATIML010001238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3724848"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1981)
                     /locus_tag="VLJ38_21395"
     CDS             complement(<1..1981)
                     /locus_tag="VLJ38_21395"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HSU42156.1"
                     /translation="MQTASGDMLERGVFPGKSRPPMDPVTLRALEWPSLLERIAGHTA
                     SLAGAERLRATEPCPTLEAARALAARTRDAVALDALGEALPLRDFPDVRESLVRAQKG
                     GTLSGHELIGIARLLAVTHAVRAFADERSDRFPALYAAVTSEARLDALERALVAALEP
                     DGTVSDAASPALREARARVRDARDALKERLEGCLKTHADVLQGRYYTERDGRYVLPVR
                     SDAHLRVEGIVLGSSASGGTLFVEPREATEHGNRLKLRLAEVEREEERVLAELTRAVA
                     EQREALERAFEAAVEADRLAALALWARGAKAEVVEPDGSDAIDLHEVRHPLLVSTGIA
                     VVPNDVRVRGGSALVISGPNAGGKTVALKCLGLAVWMARSGIPIPCATGSRVGWFSEV
                     LADVGDEQSLERSLSTFSAHVTRLAEVVRRSAPGTLVLLDEVASGTDPEEGAALAAAV
                     LEAITARGAAAAVTTHYERLKELAALPGPLENASVAFDFERMEPTFRLTLGVPGPSSA
                     LAVAARFGLEPSVLERAHALLPDRAREREEAVKRLEAERSGLERERAELRGELALAAA
                     ARADIERERDRAVTEANAELGREARELTSVVRAARSEVREARQRIKSAGLEPAALRDA
                     ERAVSRAATHVALGGTLERHERASAEQRRGKTETPT"
     gene            2012..2401
                     /locus_tag="VLJ38_21400"
     CDS             2012..2401
                     /locus_tag="VLJ38_21400"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HSU42157.1"
                     /translation="MVATAELGPLEMRVLGLVERRGTASVGDVLAELEREGDALAYTT
                     VMTVLSRLHDKGVIRRRREGRRFVYSLARGSELLKARIVKRLRSALFPGRGTAPLTAL
                     LDASELSRDDLRELRRWVDARLKAKGE"
     gene            2430..>2622
                     /locus_tag="VLJ38_21405"
     CDS             2430..>2622
                     /locus_tag="VLJ38_21405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42158.1"
                     /translation="MKLWGDALFNLSFNACASFWLALGLSLLIFRAFRLEQSRLGLVV
                     LVLPFVKLVLEFARGVPRES"
BASE COUNT          327 a          930 c          953 g          412 t
ORIGIN      
        1 gggtgggcgt ttcggttttt ccgcggcgct gctccgcgct cgcacgttca tggcgttcga
       61 gcgtgccgcc gagcgcgacg tgggttgcgg cgcgactcac ggcgcgttcg gcgtcgcgta
      121 gtgccgctgg ttccagcccc gcgctcttga tgcgctggcg cgcctcgcgc acttcgctgc
      181 gcgctgcgcg cacgacggag gtgagctcgc gcgcttcgcg accgagctcg gcgttggctt
      241 ccgtgacggc gcggtcacgc tcgcgctcga tgtccgcgcg cgcggccgcc gccagcgcga
      301 gctcgccacg gagctcggcg cgttcgcgtt cgaggccgct gcgctcggct tcgagccgtt
      361 tcactgcttc ttcgcgctcg cgcgcgcggt cgggcaagag cgcgtgcgct cgttcgagca
      421 cgctcggctc gagtccgaag cgcgcggcga cggcgagtgc gctcgacggg cccggcaccc
      481 cgagcgtcag ccgaaacgtg ggctccattc gctcgaaatc gaaggcgacg ctcgcgtttt
      541 cgagcggccc gggcagcgcg gcgagctcct tgaggcgctc gtaatgcgtc gtcacggcgg
      601 ctgctgcgcc acgcgccgtg atggcttcga gcacggccgc cgcgagggcc gcgccctctt
      661 cgggatcggt accggacgcg acctcgtcca gtagcacgag cgtccctggc gccgaacggc
      721 gcacgacctc ggccaggcgc gtcacgtgcg cgctgaacgt cgagagcgag cgctcgagcg
      781 attgttcgtc gcccacgtcg gcgagcacct cggagaacca gccgacgcgc gaccccgtgg
      841 cgcacgggat cgggatcccc gaacgtgcca tccacaccgc aaggccgaga cacttgagcg
      901 ccaccgtctt gccgccggcg ttcggccccg agatcacgag ggcgctgccg ccgcgcacgc
      961 gcacgtcgtt cggcacgacg gcgatgcccg tcgagacgag cagcgggtgg cgcacctcgt
     1021 gcaaatcgat ggcgtcgctg ccgtcgggtt cgacgacctc ggccttggcg ccgcgcgccc
     1081 agagcgcgag cgcggcgagc cggtcggctt ccaccgcggc ctcgaacgcg cgttcgagcg
     1141 cttcgcgttg ctccgccacg gcgcgcgtga gctcggccag cacgcgctcc tcctcgcgct
     1201 cgacctccgc gaggcgaagc ttcaggcgat tgccgtgctc ggtcgcttcg cgcggctcca
     1261 cgaacagggt gccgcccgac gcggaggagc cgagcacgat gccctcgacc cgcaaatgcg
     1321 cgtcggagcg gacgggcagg acgtaacgcc cgtcgcgctc ggtgtagtag cgcccttgca
     1381 gcacgtcggc gtgcgtcttc agacagcctt cgagccgctc cttgagcgcg tcacgtgcgt
     1441 cgcgcacgcg ggcgcgcgct tcgcgcagcg cgggcgacgc cgcgtcgctc accgtgccgt
     1501 ccggctcgag cgccgcgacg agcgcgcgtt cgagcgcgtc gaggcgcgct tcactggtga
     1561 cggctgcgta gagcgccggg aagcggtcgc tgcgctcgtc ggcgaacgcg cgtacggcgt
     1621 gcgtgacggc gagcaagcgc gcgatcccga tgagctcgtg gccgctcagc gtcccgcctt
     1681 tttgcgcgcg cacgagcgac tcgcgcacgt cgggaaaatc gcgtagcggt agcgcctcgc
     1741 ccagggcgtc gagcgcgacg gcgtcgcgcg tgcgcgcggc gagcgcacgc gccgcctcga
     1801 gcgtcggaca gggctcggtc gcccgcaacc gctccgcgcc ggcaaggctt gccgtgtgcc
     1861 cggcaatgcg ctcgagcagc gacggccatt cgagggcgcg gagcgtgacg gggtccatgg
     1921 gcggccgtga tttcccggga aagacgccgc gctctagcat gtccccggac gccgtttgca
     1981 ttttactacg agcgtagtag aaagcggggg catggtcgcc acggccgagc tcggccccct
     2041 cgaaatgcgc gtgctcggcc tcgtcgagcg gcgcggcacg gcttctgtcg gcgacgtgct
     2101 cgccgagctc gagcgggaag gggacgcgct cgcctacacg acggtcatga ccgttttgtc
     2161 acgcctgcac gacaagggcg tcattcgtcg ccgccgcgag ggccgtcgtt tcgtgtactc
     2221 gctggcgcgg gggtcggagc tgctcaaggc gcgcatcgtg aagcgcctcc gttcggcgtt
     2281 gttccccggg cgcggcacgg cgccgctcac cgccctgctc gacgcgagcg agctgtcgcg
     2341 cgacgatttg cgcgagctca ggcgctgggt cgacgcgcgg ctcaaggcga aaggtgaatg
     2401 acgtgggagc gcacgagctc gccgttcgaa tgaagctctg gggcgacgcg ctcttcaacc
     2461 tgtcgttcaa cgcctgtgcg tcattttggc tggcgctcgg cctgagtctg ctgattttcc
     2521 gagccttccg gctcgagcag agccggctcg gactcgtcgt gctcgtgctc ccgttcgtga
     2581 agctcgtgct ggagttcgcg cgcggggtgc cccgagagtc gt
//
LOCUS       DATIML010001239         2422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5173742, whole genome shotgun sequence.
ACCESSION   DATIML010001239 DATIML010000000
VERSION     DATIML010001239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5173742"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1830)
                     /gene="glmS"
                     /locus_tag="VLJ38_21410"
     CDS             complement(<1..1830)
                     /gene="glmS"
                     /locus_tag="VLJ38_21410"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HSU42159.1"
                     /translation="MASWPFIPLLIRRRLSSWRFIPLLIGLSPSFKNQQDCREPWDSK
                     APKMCGIVGYVGPRVAAPILLEGLRRLEYRGYDSAGLAIQATNGLEVVRSVGKLDNLS
                     RALEGRSLLGTVGIGHTRWATHGRPTEPNAHPLVSGDVAVVHNGIIENHAALRRRLEA
                     EGVVFKSDTDSEILAHLVHRALERGASLFEAVKATLGFLQGTYGIAVLAGRQPDRIVV
                     AKNASPLVIGLGEGETLCGSDIPALLGHTRQMLFLEDGELAELTSGGARVETLDGKLV
                     GRAPRRIDWSPTQAEKSGFKHFMLKEIFEQPRAVEDTLRGRIRLADGELEGAELGLDP
                     AFIANIDRVYFLACGTSYHATIAGRYWIEQLARLPAQTEIASEVRLRSPVFTPRDLVV
                     AVSQSGETVDTLAAVRTAREAGAYVLAVANVVDSMIPRASNGALYTHAGPEIGVASTK
                     CFTTQLVALLLLALYLGRRRGVLDAASTAPALEALMAVPSLMRRSLERSDEAYEVARR
                     WHNARHMLFLGRGLGYPIALEGALKLKEISYAHAEGYAAGEMKHGPIALIDDEMPVVV
                     VMPHDRHYEKTLANVQEVRARDGRVIAVVSESDTIASTLAEQVL"
     gene            complement(1960..>2422)
                     /locus_tag="VLJ38_21415"
     CDS             complement(1960..>2422)
                     /locus_tag="VLJ38_21415"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU42160.1"
                     /translation="EFHALASELERERGGIKVVLGMLSRPDIAQILSHARAFVCPSVY
                     EPFGIVNLEAMACGVPVIASAVGGIPEIVVENVTGHLVHFEGDGTAKNEPRDPDAFAR
                     ALAASISQLTADPERARRFGAAGRARVVEQFSWGAIADRTIALYRSLAERT"
BASE COUNT          378 a          788 c          847 g          409 t
ORIGIN      
        1 caagacttgc tcggcaagtg tcgaggctat cgtgtcgctc tcgctcacga cggcgatgac
       61 gcgaccgtcg cgggcgcgca cctcctgcac gttcgcgagc gtcttttcgt agtggcggtc
      121 gtgcggcatg acgacgacga cgggcatctc gtcgtcgatg agcgcgatgg ggccgtgttt
      181 catctcgccc gcggcgtagc cttcggcgtg ggcgtagctg atttccttga gcttgagcgc
      241 gccctcgagc gcgatggggt agccgagtcc gcgtcccaaa aagagcatgt gccgcgcgtt
      301 gtgccagcgg cgcgcgactt cgtacgcttc gtcgctgcgc tcgagcgagc ggcgcatcag
      361 cgacgggacg gccatgagcg cctcgagcgc cggggccgtg ctcgccgcgt cgagcacgcc
      421 gcggcgtcgg ccgaggtaga gcgcgagcag gagcagcgcc acgagctgag tcgtaaagca
      481 cttggtcgag gcgacgccga tctcggggcc cgcgtgcgtg tagagcgcgc cgttcgacgc
      541 gcgcggaatc atgctgtcca cgacgttcgc gacggcgagc acgtaggcgc ccgcttcgcg
      601 cgccgtgcgc acggccgcca gcgtgtcgac ggtttcgccc gactgactca ccgccacgac
      661 gagatcgcgc ggcgtgaaca cgggcgagcg caggcgcacc tcgctcgcga tttccgtctg
      721 tgcgggcagg cgcgcgagct gctcgatcca gtaacggccc gcgatcgtcg cgtggtagct
      781 cgtgccgcac gcgaggaaat agacgcggtc gatgttggcg atgaacgcgg ggtcgagtcc
      841 gagctcggcg ccttcgagct cgccgtcggc caggcgaatg cggccgcgca gcgtgtcttc
      901 gacggcgcgc ggctgctcga agatctcctt gagcatgaag tgcttgaagc cgctcttttc
      961 cgcctgtgtc gggctccaat cgatgcggcg cggcgcgcga ccgacgagct ttccgtcgag
     1021 cgtttcgacg cgcgcgccgc cgctcgtgag ctcggcgagc tcgccgtctt cgaggaagag
     1081 catctggcgc gtgtgcccga gcagcgccgg gatgtcgctg ccgcacaggg tctcgccttc
     1141 cccgagtccg atcacgagcg gcgacgcgtt cttcgcgacg acgatgcggt cgggctggcg
     1201 cccagcgagc acggcgatgc cgtacgttcc ctgcaggaac ccgagcgtcg ccttgacggc
     1261 ttcgaacagg gacgcgccac gctcgagcgc gcgatgcacg aggtgcgcga ggatctcgct
     1321 gtcggtgtcg ctcttgaaga cgacgccctc cgcttcgagc ctgcggcgga gcgccgcgtg
     1381 gttttcgatg atgccgttgt gcaccaccgc gacgtcgccc gagacgagcg gatgcgcgtt
     1441 cggctcagtc ggccgcccgt gtgtcgccca gcgcgtatga ccgatgccga ccgtgccgag
     1501 tagactccgc ccctcgagcg cgcgcgataa gttgtcgagc ttgccgacgc tgcgcacgac
     1561 ctcgagcccg ttggtcgctt gaatggcgag acccgccgag tcgtagccgc gatattcgag
     1621 ccgtcgcagg ccctcgagca ggatgggggc cgccacgcga ggaccgacat aaccgacgat
     1681 gccgcacatc ttgggcgcct tagaatccca cggctcgcga cagtcttgtt ggtttttgaa
     1741 tgaggggctc agcccgatga gcaggggaat gaaccgccaa gacgagagtc tccgcctgat
     1801 gagcagggga atgaacggcc aagacgccaa gggcgccgag tttttgtact gatcagcagc
     1861 gctctggggg atccgttccg agcaaaaatt cctctgattt ggcgctcttg gcgtcttggc
     1921 ggttcacgtc ccctccccga ggcgtgcagc gtcgagaagc taagtccttt cggcgagcga
     1981 acggtagagt gcgatggtgc ggtcggcgat cgcgccccac gaaaattgct cgacgacgcg
     2041 cgcgcgaccg gcggcgccga agcggcgggc gcgctcgggg tccgcggtca actgcgaaat
     2101 acttgcagcg agcgcccgag cgaacgcgtc ggggtcgcgg ggctcgtttt tggcggtacc
     2161 gtcgccctcg aagtggacga ggtgtccagt cacgttttcc acgacgattt ccgggatgcc
     2221 gcccacggcc gaagcgatca ccggcacgcc gcacgccatg gcctcgagat tcacgatgcc
     2281 gaagggttcg tagacggacg ggcagacgaa agcgcgcgcg tgactcaaaa tctgtgcaat
     2341 gtccggccgg ctcagcatgc cgaggaccac cttgatcccg ccgcgctcgc gctcgagttc
     2401 actcgcgagc gcgtggaatt cg
//
LOCUS       DATIML010001240         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1997657, whole genome shotgun sequence.
ACCESSION   DATIML010001240 DATIML010000000
VERSION     DATIML010001240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1997657"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /gene="greB"
                     /locus_tag="VLJ38_21420"
     CDS             complement(<1..397)
                     /gene="greB"
                     /locus_tag="VLJ38_21420"
                     /inference="COORDINATES: protein motif:HMM:TIGR01461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003711 - transcription elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HSU42161.1"
                     /translation="MPNYLTPEGAKKLADELRELTLTERPRIVLEVSDAAAQGDRSEN
                     AEYIYGKRRLREIDRRVRFLSKRLDDIVVVNEAPSDAKRVFFGAYVTVEDDDGERVEY
                     RIVGPDESDVDKKWISMEAPVAKALMGKRL"
     gene            460..1917
                     /locus_tag="VLJ38_21425"
     CDS             460..1917
                     /locus_tag="VLJ38_21425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42162.1"
                     /translation="MRSTTRLVLVLVGTGAAVVVAAGVVVWRALPGLVEREVVRRARD
                     QGVELTFGSLDFGWNWAELKQVKAQLIGVPEVALAVERLDADLDGTKLTRVDLTGVKL
                     DATGSLPTLALDLGAWAKRYPSAFALPLNATQVTARFLPDPNAPAWLELQNGSVASTT
                     AGSIVAADHVLVAGADVGRVGASWVPSATSVVVGLGESDLSRAPLRMNVDLTAAKPKV
                     GFELALTPLERLAGPFAVPVPIQGASASAKAGFEFASTTSTLPERGAVHAELHGFVPP
                     HPAELDGFVFGDTTVVESNLAFAPDGKSVTLTDTRLTAGKFVLMGGGHVIRAADAAAI
                     DLDLRGALPCDALASAAAESRVGRLLGRAPGSRAGSVARQVIGGSVGVRVQVTASTKN
                     IAGASIKRSIGIGCGLKPLSLEDVARLGETLLPSDLSELTDDVHKLTPKLPDGSPLLP
                     LPDLKIPSLLPREPAPAPARPAHSAAAPTPAASKG"
     gene            complement(1919..>2148)
                     /locus_tag="VLJ38_21430"
     CDS             complement(1919..>2148)
                     /locus_tag="VLJ38_21430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42163.1"
                     /translation="CYRLVEQPGSAGTFGADLTIGGAGGRAKVKTTRTKLRGEAFTAC
                     MVRAFESVSFGRPPSGRAVVVSYSVKFSLSE"
BASE COUNT          312 a          773 c          717 g          346 t
ORIGIN      
        1 cgagccgctt gcccatcagc gccttcgcga cgggggcttc catgctgatc cacttcttgt
       61 cgacgtcgga ctcgtctggt ccgacgatcc gatactcgac ccgttcgccg tcgtcgtcct
      121 cgaccgtgac gtacgcgccg aagaacacgc gcttggcgtc gctcggagcc tcgttcacca
      181 cgacgatgtc gtcgagccgc ttgctcaaga agcgcacgcg gcgatcgatc tcgcgcagcc
      241 gacgcttgcc gtagatgtac tccgcgtttt cggagcgatc cccctgagcg gccgcgtccg
      301 acacctccag cacgatgcgc ggccgctcgg tcagcgtgag ctcgcggagc tcgtctgcaa
      361 gctttttggc gccttcgggg gtgaggtagt tcggcatctt cacgggcggc gggcgctcct
      421 gatggcaagc gcgcgcgagc cagcgtagcc taacgcgccg tgaggtcgac gacgcggctc
      481 gtactcgtgc tggtcgggac cggcgcggca gtcgtcgtgg ccgcgggcgt cgtggtttgg
      541 cgcgcgctgc ccggactcgt cgagcgcgag gtcgtgcgcc gcgcgcgcga tcagggcgtg
      601 gagctgacgt tcggctcgct cgacttcggt tggaattggg cggagctcaa gcaggtcaag
      661 gctcagctca tcggcgtccc ggaagtcgcg ctcgcggtcg agcgcttgga tgccgatctc
      721 gacggcacca agctcacgcg cgtcgatctg acgggtgtca agctcgacgc cacgggctca
      781 ctaccgacgt tggcgctcga tttgggtgcg tgggccaaac gctacccgtc ggcgtttgcg
      841 ctcccgctca acgcgacaca agtgacggcg cgctttctgc ccgacccgaa cgcgcccgct
      901 tggctcgagc ttcagaacgg cagcgtcgcg agcacgacgg cgggcagcat cgtcgccgcc
      961 gatcacgtgc tcgtcgcggg cgccgacgtg ggacgcgtgg gcgctagctg ggtgccgagc
     1021 gcgaccagcg tcgtcgtggg cctcggcgag agcgatctgt cgcgcgcacc gctgcgcatg
     1081 aacgtcgatt taacggcggc aaagcccaag gtcggcttcg agctcgcgct cacgccgctc
     1141 gagcggctcg caggcccgtt cgccgtgccg gtcccaatcc agggcgcgag cgctagcgcc
     1201 aaggccggct tcgaattcgc ctccacgacc agcaccttgc ccgagcgcgg cgccgtgcac
     1261 gccgagctcc acggcttcgt tccgccgcac cccgccgagc tcgacggctt cgtgttcggc
     1321 gacaccaccg tcgtcgagtc gaacctcgcg ttcgcgcccg acggcaagag cgtgacgctc
     1381 acggacacgc gactgacggc aggcaagttc gtgctcatgg gcggcggtca cgtgatccgt
     1441 gcggcggacg cggcagcgat cgatctcgat ctacgcggcg cgctgccgtg cgatgcactc
     1501 gcgagcgccg ccgccgagtc gcgcgtcggc cgcttgctcg gacgcgctcc cggttctcgc
     1561 gccggctcgg tcgcacgcca ggtcattggc ggctcggtgg gcgtgcgggt acaggtcacg
     1621 gcgagcacca agaacatcgc cggcgcgagc atcaagcgca gcatcggtat cggttgcggg
     1681 ctcaagccgc tctcgctcga ggacgtcgca agactcggcg agaccctctt gccgagcgac
     1741 ttgtccgagc tcacggacga cgtccacaaa ctcacgccaa agctgcccga cggcagcccg
     1801 ctcttgccgc tgcccgatct caaaatacct tcgctcttgc cgcgcgagcc tgcgcccgcc
     1861 cccgcacgcc ctgcgcactc ggcagccgcg cccacacccg ccgcgagcaa gggctgactc
     1921 actcgctcaa gctgaacttc accgagtaac tcaccacgac ggcgcggccg gacggcggtc
     1981 gcccgaagga gacgctctcg aacgcgcgca ccatgcacgc cgtgaaggct tcgccgcgga
     2041 gcttggtgcg cgtcgtcttc accttggcgc gaccgcccgc accgccgatc gtgagatcgg
     2101 ccccgaacgt gccggcgctc ccgggctgct cgacgagtcg gtaacagt
//
LOCUS       DATIML010001241         3958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4303138, whole genome shotgun sequence.
ACCESSION   DATIML010001241 DATIML010000000
VERSION     DATIML010001241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4303138"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VLJ38_21435"
     CDS             <1..244
                     /locus_tag="VLJ38_21435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42164.1"
                     /translation="GMPYVCLPSGECYPGDMGLGCTSSDECMGQFTCECVEHCDDPAG
                     GQTICTEPCETDAECRGYSQAKKVCLNGWCRLPAQP"
     gene            complement(261..1571)
                     /locus_tag="VLJ38_21440"
     CDS             complement(261..1571)
                     /locus_tag="VLJ38_21440"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSU42165.1"
                     /translation="MGHTAQPELPTTTAGDSARAGAIMILRWVHPRADRITILAAETV
                     FLGRDPACTTELDSSRVSRRHAEVGRDAGGVFVSDLASRNGVFVNGERTQRSPLRVGD
                     VLRLGDFIAVVEAVTPSGLATERELGFGIVGGPLMRVVWERAKAAAASGADALLVGEA
                     GVGKELVARAMHRARSRSGPFIVFDASVEELSELVGWTHGARAGFPSEGRGYVRTAEH
                     GTLLLRNVEELPLEAQTELLTMLETRTVAPLGASERTPFDVQIVVAAEPPWSTLAAER
                     LLPELGARLPAGLNEIAPLRDRRADIVPLFAARVRKLAGDAPPALEPELLELLCLEDW
                     PLNADELASAARRLCTAFPHERELKRRHWYEVLGARVFVPDGERDSSSPPPRRSASVY
                     PPDEITALEAALERHRGNLTKAAHELGITRARAYRMLKAVQTKR"
     gene            complement(1604..>3958)
                     /locus_tag="VLJ38_21445"
     CDS             complement(1604..>3958)
                     /locus_tag="VLJ38_21445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU42166.1"
                     /translation="LDVFDMVEPDLQMVLVSGVQRALRESSAIVFKGLCLDDSSYKVT
                     VRRVQSKKAAGPHVLVSFEPMVGEARPPAVLEQEIDIRQVSREQLGALEVELSRTKEN
                     LQATTEQLESSNEELQAANEELLASNEELQSTNEELQSVNEELYSVNAEYQRKISDLT
                     ELANDMDNLLSSTDIGTIFLDRELKIRKFTPQIADNFNLLPTDVGRPIETFTYAVEHP
                     ELNGDLKRVLATGERVERELRDRHNRSFFLRILPYRAKGGVDGVVLTLIDVSGLKSAE
                     DALFHERYLLNSLLFSIPDAIYFKDARGRFIRTNQPMAERLGLSDPREAVGKTGFELP
                     SHQAALAVHQQDEEVVQTGVAQHYKLEKRERPDGAVEWDLVSRLPLTDKASRIVGIIG
                     IFRNVTQEKLAEEKIQDSVRRRDEFLAMLSHELRNPLGAIVSATALLKRTANRVLGEH
                     SKLLSILERQSQQMARLLDDLLEVSRVTQDKIELRRSVLDLRPVVKDAVDATRSLMES
                     RGLNFSVELDPEPLYVDGDPARLQQIQVNLLNNAAKYTPQGGHVVLHAGREDGHVTIR
                     VRDDGVGLPKDMLDSAFDLFVQSRRTLDRARGGLGIGLTLVRGLVTKHGGSVSARSDG
                     EGKGSEFVVRLPLASPPADCAPEEQQPASRPVLPHGSKIVIIEDNADSREMLCDLLTD
                     AGFDCKSSDNGAAGLALIEEFEPAAAIVDIGLPGIDGLELARRVRAASKNPNLYLIAL
                     TGYGQRADRALALEAGFNEHVVKPVDLANLERLLGAQPSWHAAN"
BASE COUNT          619 a         1300 c         1339 g          700 t
ORIGIN      
        1 cggcatgcct tacgtgtgtc tgccgagcgg cgaatgctac ccgggcgaca tgggcctcgg
       61 ctgcacgagc tccgacgagt gcatggggca attcacgtgc gagtgcgtcg agcactgtga
      121 cgatcccgcg gggggccaaa ccatctgcac cgagccctgc gaaacggacg cagagtgccg
      181 cggctactcg caagcgaaga aggtctgtct caacggttgg tgccgactgc cggcgcagcc
      241 ctgagcacgt ccgagctcgc tcagcgcttg gtttgcacgg ctttcagcat gcgatacgca
      301 cgcgcgcgtg tgataccgag ttcgtgcgcg gccttggtca aattgcctcg atggcgctcg
      361 agcgccgcct cgagcgccgt aatctcgtcc ggcggataaa cgctcgcgct gcggcgaggg
      421 ggcggtgacg aagagtcccg ttcgccgtcg gggacgaaca cgcgcgcgcc gagcacctcg
      481 taccaatgtc tgcgcttgag ctcgcgttcg tgcggaaacg ccgtgcagag ccgccgcgcg
      541 gcgctcgcga gctcgtctgc gttgagcggc caatcctcga ggcataagag ctcgagcagc
      601 tcgggttcga gcgcgggtgg cgcatctccc gcgagcttac ggacacgcgc cgcgaacagg
      661 ggcacgatgt ccgcccggcg gtcgcgcagc ggagcgatct cgttcagtcc cgcggggagt
      721 cgtgcgccga gctccggcaa tagccgttcg gccgcaagcg tgctccaagg cggctcggcg
      781 gccacgacga tttgaacatc gaagggcgtg cgctcgctcg cgccgagcgg cgcgacggtc
      841 cgcgtctcga gcatggtcag gagctcggtt tgcgcctcga gcggcagctc ctcgacgttg
      901 cgaagcagca gcgtgccgtg ctccgcggta cgcacgtaac cgcgcccttc gctcggaaat
      961 cccgcgcgcg ccccgtgcgt ccagcccacg agctcgctca gctcctcgac gctcgcgtcg
     1021 aacacgatga acggacccga gcgcgaacgg gcgcggtgca tggcccgcgc gacgagctcc
     1081 ttgcccaccc ccgcttcgcc gacgagcagt gcgtccgcgc cgctcgccgc ggccgccttg
     1141 gcgcgctccc aaacgacccg catgagcggt ccgcccacga tcccgaagcc gagctcccgc
     1201 tctgtcgcga gaccggacgg cgtcacggcc tcgacgaccg cgatgaagtc tccgagccgc
     1261 agcacatcgc ccacgcggag cggcgagcgt tgggtgcgct cgccattgac gaacacgccg
     1321 ttgcgactag cgagatcgct cacgaaaacg ccgccggcgt cacggccgac ctcggcgtgc
     1381 cggcgcgaca cgcgcgagct gtcgagctcg gtcgtgcacg ccggatcgcg acctagaaag
     1441 acggtctcgg cggcgaggat cgtgattcga tcagcgcgcg gatggaccca gcgcaggatc
     1501 atgattgcac cggcccgtgc cgagtccccc gcggtcgtcg tcggcagctc gggttgcgcc
     1561 gtgtggccca tgccacacgg gtagcacgac ccacggcgga ctctcaattc gccgcgtgcc
     1621 agctcggctg tgcgccgagc aagcgttcga ggttcgcgag gtctacgggt ttgaccacgt
     1681 gttcgttgaa gccggcctcg agcgcgaggg cccgatcggc gcgctggcca tagcccgtga
     1741 gcgcgatcag gtagaggttc gggttcttgg aggctgcgcg gacgcgccgc gcgagctcga
     1801 ggccgtcgat gcccggcagg ccgatgtcga cgatggcggc agcgggctcg aattcctcga
     1861 tcagcgcgag cccagcggcg ccgttgtcgg acgatttgca gtcgaagccg gcgtcggtga
     1921 gcaggtcaca caacatttcg cgactgtcgg cgttgtcttc gatgatcacg atcttggatc
     1981 cgtgaggcag aaccggccgg ctcgcgggct gctgctcctc gggggcgcaa tccgcgggcg
     2041 gactcgcgag cgggagacga accacgaact cgctgccctt gccctcacca tcgctgcgtg
     2101 cgctcacgct accgccgtgt ttcgtgacga gcccacgcac gagcgtgagt ccgatgccga
     2161 ggccgccacg cgcgcgatcc aacgtgcgtc gcgactgcac gaacagatcg aaggcgctgt
     2221 cgagcatgtc tttcggcaat ccgacgccgt cgtcacgcac gcgaatcgtg acgtggccgt
     2281 cctcgcggcc cgcgtgcagc acgacgtgac cgccctgcgg cgtgtacttg gcggcgttgt
     2341 tgagcaggtt cacctggatc tgctgcagcc gcgcgggatc gccatcgacg tacagaggct
     2401 cgggatcgag ctcgaccgag aagtttagac cgcgcgactc cattaggctc cgcgtcgcgt
     2461 caaccgcgtc tttgaccacg ggtctgaggt cgagcacgct ccttcggagc tcgatcttgt
     2521 cctgggtgac ccggctcacc tccagcaaat cgtcgagtaa gcgggccatt tgttgggact
     2581 gccgttcgag gatcgagagc agcttcgagt gctcgccgag cacgcggttg gccgtgcgtt
     2641 tgaggagcgc cgtggccgag acgatggccc cgagcgggtt tctgagctcg tgcgagagca
     2701 tggcgaggaa ttcgtcgcgc cgtcgcaccg agtcctggat cttttcctcg gcgagcttct
     2761 cttgcgtcac gttccggaag atcccgatga tgccgacgat gcgtgaagcc ttgtccgtga
     2821 gcggcaggcg cgagacgaga tcccattcga cggcaccgtc ggggcgctcg cgcttttcga
     2881 gcttgtagtg ctgcgcgacg ccggtctgca cgacctcctc gtcttgctgg tgcaccgcca
     2941 gagccgcctg atggctcggc agctcgaagc cggtcttgcc cacggcttcg cgcggatcgc
     3001 tcagcccgag tcgctcggcc atcggttggt tcgtgcggat gaagcgcccg cgcgcgtcct
     3061 tgaagtagat ggcatccggg atgctgaaga gcaggctgtt caagagataa cgttcgtgaa
     3121 agagcgcgtc ctcggcggat ttgaggccgc tcacgtcgat gagcgtgagc acgacgccgt
     3181 cgacgccgcc cttggcgcgg tacggcagaa tgcggagaaa gaacgaccga ttgtgccgat
     3241 cgcgcagctc gcgttccacg cgttcacccg tggcgagcac gcgcttgagg tcgccgttga
     3301 gctcggggtg ctcgacggcg tacgtgaagg tctcgatggg ccggcccacg tccgtcggga
     3361 gcaagttgaa attgtccgcg atctgcggcg tgaatttgcg gatcttgagc tcgcggtcga
     3421 ggaagatggt gccgatgtcc gtgctcgaga gcaggttatc catgtcgttc gcgagctcgg
     3481 tcaagtccga gatcttgcgc tggtattcgg cgttgaccga gtagagctcc tcgttgacgc
     3541 tctggagctc ttcgttcgtg ctctggagct cttcgttgga cgcgagcaac tcttcgttcg
     3601 cggcttgtag ctcttcgttg ctcgattcga gctgctcggt ggtggcctgc aggttctctt
     3661 tggtgcgact gagctccacc tcgagcgccc ccaattgctc gcgcgagacc tgacggatgt
     3721 cgatctcctg ctcgagaacg gcgggtggac gcgcctcccc caccatcggc tcgaaggaga
     3781 cgagcacgtg cgggccggcc gccttcttgc tttgaacgcg ccgcaccgtg accttgtagc
     3841 tgctgtcgtc gaggcaaagt cccttgaaca cgatcgccga cgactctcgg agtgcgcgct
     3901 gcacgccgct gaccagcacc atctgcaaat cgggctcgac catgtcgaac acgtcgag
//
LOCUS       DATIML010001242         2030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2279657, whole genome shotgun sequence.
ACCESSION   DATIML010001242 DATIML010000000
VERSION     DATIML010001242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2279657"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VLJ38_21450"
     CDS             complement(<1..615)
                     /locus_tag="VLJ38_21450"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU42167.1"
                     /translation="MQAAEEWAPATGRRSRVLIVDDEPQVLVALEDVLMREFEVLTAA
                     SPEVALRVLDEVRDVAVVIADQRMPGMTGDELFSKISASSDATRVMVTGYAELPAVIR
                     AVNRGRIFAYVTKPWDSCELRLTIQKGVEHYELARELAHERQLLDDLMDNIPDAIYFK
                     DRELRFTRMNRACAERVALRDTSDAVGKRLVDLGIPPDLASVFEQ"
     gene            997..>2030
                     /locus_tag="VLJ38_21455"
     CDS             997..>2030
                     /locus_tag="VLJ38_21455"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSU42168.1"
                     /translation="MNDFGRASVELLIVGAGPVGLFAGLCAARAGIATTIIDHRYRGF
                     GRGYAALLHPSSVRLLAEAGVSERALGAGRSLDRVGLRVDGSERLALELPAPALALSQ
                     SALEQALLAALRSTDVQVLSPCEGGVLREDGSGVEVRVVRRELVTLGSPAEYSDWQPV
                     ESFALRAAFVIGADGYDSRVRNALGIDVMKLGETESFAMFEVPADPPPSPDIELSLSD
                     SLSAVMLPLAEGRARFGFQLATGLDEEPTPARLSALLRERTPWFDDRPRAVDWSSTIQ
                     FERQLARRFGSGRIWLAGDAAHVTSPLGAHSMNLGLAEAQDLVRRVQACLHGGAEVAS
                     LRQYGSERQR"
BASE COUNT          282 a          705 c          700 g          343 t
ORIGIN      
        1 ttgctcgaac accgacgcga ggtccggtgg gatgccgaga tcgacgaggc gcttgccgac
       61 ggcgtcgctc gtgtcgcgga gcgcgacgcg ttcggcgcac gcgcggttca tgcgggtgaa
      121 gcggagctcg cgatccttga agtagatggc gtcggggatg ttgtccatga gatcgtcgag
      181 cagctgccgc tcatgcgcga gttcgcgcgc gagctcgtaa tgctcgacgc ccttctggat
      241 cgtcagcctg agctcgcagc tgtcccacgg cttggtgacg tacgcgaaga tacgcccgcg
      301 gttcacggcg cggatcacgg cgggcagctc ggcgtagccc gtcaccatga cccgcgtcgc
      361 gtcggaagag gcgctaatct tcgagaacag ctcgtcgccc gtcatgcccg gcatgcgctg
      421 gtcggcgatc accacggcca cgtcgcgcac ctcgtcgagc acacgcagcg cgacttccgg
      481 cgaagcggcc gtcaacacct cgaactcacg cattaacacg tcttccagcg cgaccagcac
      541 ctgcggctcg tcgtcgacga tcaatactcg gctacggcgc cccgttgcgg gtgcccactc
      601 ctctgctgcc tgcatccgat gtccctttcg gtttgcccac gcagcataca cggagttatg
      661 cgtcgctgga ctcatttgag gggtttcgcg aaacgcccca ctacgagtcc tgcgagtctc
      721 gcgacgaggc aagtgggcgc ggctcagtcg ggcgcgcgct tcgatgccgt gggcacggag
      781 ggacttgcga aatagccatg gcgcgtacga ctcggtccgt gttgacctgc ggaggcgccc
      841 gcaccgttgt gtcgtgcttc gcggactcgc tggcgtgacg gcgcgcactc tccgcgcgtg
      901 agtgggtact cgagcgcagt tcttgcgcgg cgagcgcctg aaattcgcga aaagcagcgt
      961 tctcagcccg gcgcggatgt tgctgatgct cgcgggatga acgacttcgg ccgcgcgtcc
     1021 gtcgagctcc tcatcgtggg tgcgggaccg gtcgggctct tcgccgggct ctgcgcggcc
     1081 cgagccggta tcgcgaccac catcatcgat catcggtacc gcgggttcgg gcgcggctac
     1141 gcggcgttgc tgcatccgag cagcgttcgc ttgctcgccg aggccggcgt gtcggagcgc
     1201 gcgctcggcg ccggacgcag cctcgaccgc gtcggcctgc gcgtggacgg cagcgagcgt
     1261 ctcgccctcg agctgccggc gccggcgctc gcgctatcgc agagcgcgct cgagcaggcg
     1321 ttgctggcgg cgctgcgcag cacggacgtc caggtcctct cgccgtgcga gggtggggtg
     1381 ctgcgcgaag acggctccgg cgtcgaggtg cgcgtcgtcc ggcgcgagct cgtcacgctc
     1441 gggtctcccg ccgaatacag cgattggcag cccgtcgaat cctttgcgtt gcgcgccgcg
     1501 ttcgtcatcg gcgccgacgg ctacgactcg cgcgtgcgga acgcgctcgg catcgacgtg
     1561 atgaagctcg gcgagacgga gagcttcgcc atgttcgagg tgcccgccga ccccccgccg
     1621 agtcccgaca tcgagctctc gctttccgat tcgctctcgg ccgtcatgct gccgctcgcc
     1681 gaaggacgcg cgcggttcgg gtttcagctc gcaaccggcc tcgacgaaga gccgacgccc
     1741 gcacggctct cggcgctcct gcgcgagcgg accccgtggt tcgacgatcg cccgcgcgcc
     1801 gtcgattgga gctcgacgat tcagttcgag cgccagctgg cgcgccgctt cggcagcggc
     1861 cgcatctggc tcgcgggcga cgccgcgcac gtgacgagcc cactcggcgc ccacagcatg
     1921 aacctgggcc tcgcggaggc gcaggatctg gtgcgccgcg tccaggcctg tctccacggc
     1981 ggagccgagg tcgcatccct ccgccaatac ggcagcgagc gccagcgcga
//
LOCUS       DATIML010001243         7549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_549925, whole genome shotgun sequence.
ACCESSION   DATIML010001243 DATIML010000000
VERSION     DATIML010001243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7549
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_549925"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..566
                     /locus_tag="VLJ38_21460"
     CDS             <1..566
                     /locus_tag="VLJ38_21460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42169.1"
                     /translation="PPPEWHCDANLYADAKFCDCGCGAPDPDCRINTPDSCERCTCGF
                     NCAAAVDPTDTTKCAPPPPGWTCLPEAYANFTCDCGCGAMDIDCLPNRYCEYCNGCAK
                     GYCGRIDQNDMTKCIDRPAPSAWTCPSDVYFDGACDCGCGAADVDCGGPSKIACDVCD
                     DPGSCSNVPCSVTPNPIKSSDNARCSN"
     gene            613..2535
                     /locus_tag="VLJ38_21465"
     CDS             613..2535
                     /locus_tag="VLJ38_21465"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU42170.1"
                     /translation="MEPSRDPESELKVLRERVVQLERAMSTRSDPLLAALLQNAAAFL
                     TVITPEGRLMATGRESEGFGSVVGRSVLEFTPPGSHDTVMQALAKVNETLQPVTYEAA
                     GYGENGEPDHVYQVRAVPIVAEGRVESIVVVPTDITERVRLERSLRESNESLRLAVAA
                     SGMGFWRWDVAGDVIYWDPRLCEIYGVEQAPPDYRRYVELIHPEDLPIVEAAVRRALE
                     QGTYPTTEHRIIRASDGAERWFLAAATVGRDEGGRPVLLHGGGLDITDRKQLARQLEL
                     AERVQAVGQLAAGIAHNFNNLLAVIVPTLSLAVEEPTPEDTSALRAALTAALQARELV
                     QSMFALTAAPDALAGGSADASDVVKRTVAMCRATFPREIDISCSIEPAPAPVGVEASS
                     LEQIVLHLLTNARDAIEAQPRGVAEIRVMVGYPRENAAGVARITIADSGVGMNDETRS
                     RIFDPFFTTKARQRGTGLGLATVAARVRDARGTIECRSEPARGTTFSLELPLRSSSPS
                     PQAEQRAPMPARLSGRVLVVDDEDLVRATLRRILKRAGLEVLEAASAPEARALLEQTP
                     VDLVVLDDSMPYESGLAAVPSLRARTHAPFVLFTGHAPAVPDGVAALVRKPARPDELL
                     RVVHDLLAKAKSREPS"
     gene            2682..3200
                     /locus_tag="VLJ38_21470"
     CDS             2682..3200
                     /locus_tag="VLJ38_21470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42171.1"
                     /translation="MATDENGSSNLGRQLLERAKTAKDQAQSSVSELAARATETATGA
                     AGELRDQVALKASELRDAGLDKLTETLNDFNAALPVLREAGYTLSGVEIGIGLPPKVM
                     AGFVVSDEVEPENIARIVDEHADKKFTVLLMKTMHQAWQLQARIKLIGGLKPRGLSVE
                     LGLVPSVTIQFG"
     gene            3197..4294
                     /locus_tag="VLJ38_21475"
     CDS             3197..4294
                     /locus_tag="VLJ38_21475"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42172.1"
                     /translation="MKQLKSGIGFGASHAFSLLTIVALGVVASLGRHSLGWTLFAIVA
                     LALAVTTAVHHAEVIAARVGPTLGALVLALAVTVIEVGLIVSMMTNDTPDSAVVARDT
                     VYSAVIIVTNGILGVCLLVGGLRFKELGFHAGGTNSLLAVLAVLSGLTLVLPNFTTST
                     PGPVYNSAQLVFASVASLVLYGCLLFAQTKTHKDYFEQPAVAGEAPLADHSAPTLGMA
                     RLSFACLMLSLVSVIGLAKKLSPAIEAGIDAAGAPRATVGIVIALLVLAPELFAALSA
                     ARQNRLQTSLNLALGSGAASIALTIPTVSVFAIATGRSLVLGLDSKNIVFLTLTFLTS
                     GLTLGRGSGTALQGLTHLVLLCAFVAFAFVP"
     gene            4634..5569
                     /locus_tag="VLJ38_21480"
     CDS             4634..5569
                     /locus_tag="VLJ38_21480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSU42173.1"
                     /translation="MSLSEYVDTLNLLGDESRLRLCALLRDRELCVTDLVRVTGIAQS
                     RVSTHLGRLRDAGFVRDRRQGAQSFYALAETALPPAAHAVLDGAAGSADPTLAGDQRR
                     LAELEAERRGGLPDFAPDDLERYYSPGRTWQSLSAGIAGLLDLGDVLDVGAGDGAAAA
                     VLAPYCRSLTCIDVNARLVEVATQRLAKFSHARALTADVHALPFDAHAFDSVLLFHTL
                     TYAADPPKALRQCARVLRPGGRLVVLCLDRHEQQEITARYGELHPGFTPDALRELLVA
                     TGLDVRSAHVASRELKKPHLQVVLAVANKAAVPSS"
     gene            5582..>7549
                     /locus_tag="VLJ38_21485"
     CDS             5582..>7549
                     /locus_tag="VLJ38_21485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HSU42174.1"
                     /translation="MENLHPLQKLLRERIAIIDGAMGTTIRTYGMKEADIRGERFKNA
                     SKDLLNNGDLFSLTQPQMIGDIHRRFLEAGADIIETNTFGATTISQSEFFVDDPREHG
                     GKKDPEFYQKILENPFLIALAAEINEASARQCREWADRVGNNDGRQRFVAGAIGPLTV
                     SLSNSPDADDAGFRVVTFDQVKQAYVEQVRALIRGGVDTLLVETIFDSLNAKAALVAI
                     QEVFEADGVKLPIQISAAVGRGGETMISAQTIGAYWNAVEHVHPLSVGLNCSLGPDLM
                     YPFLAELAQKSSTAISAYPNAGLPNPLSATGFDLEPPDMARFLGDFARSGLINIAGGC
                     CGNTPEHIAAIAKALEHAPPRAYTAEPDATSATAPAAEAKSATSEPALELNSPSVAAA
                     SGATAREFRPLRLSGSQPFTQQQGVYIMIGERTNVAGSPKFAKLVKDNKYEEAVSVAR
                     QQVENGANVIDICMDEGMIDGVAAMKRFLSLLASEPEVAKVPFMVDSSKWEVIEAGLK
                     CLQGKGIVNSISLKEGEDKFRQNARHILHYGAAVVVMAFDEQGQAATYEDKIRICRRA
                     YDILTELGFPPEDIIFDPNILTVATGIEEHNNYAVDFFNATAWIKQNLPHAKVSGGVS
                     NVSFSFRGNNKVREAMHSAFLYHAISAGMDMG"
BASE COUNT         1266 a         2565 c         2455 g         1263 t
ORIGIN      
        1 agccgccgcc cgagtggcat tgcgacgcga acctgtatgc ggacgccaag ttctgcgact
       61 gcggttgcgg cgccccggat ccggactgtc gcattaatac ccccgacagc tgcgagcgct
      121 gcacctgcgg tttcaactgc gccgctgcgg tcgacccgac cgacaccacg aaatgcgcgc
      181 ctccaccgcc cggctggact tgtctgcccg aagcctacgc caatttcacc tgcgattgcg
      241 gttgtggcgc catggatatc gattgccttc cgaaccggta ctgcgaatac tgtaacggtt
      301 gtgcaaaggg atattgcggc cgcatcgatc aaaacgacat gaccaagtgc atcgatcggc
      361 ccgcgccctc ggcttggacc tgccccagcg atgtctactt cgacggagct tgcgactgcg
      421 gctgcggcgc cgccgatgtc gactgcggag gaccgagcaa gatcgcttgt gacgtctgcg
      481 acgatcccgg tagctgctcg aacgtcccgt gctccgtgac gccgaacccc atcaagtcga
      541 gcgacaacgc ccgctgttcg aattaagccg tcttggtaga cagccggccc gcagcctgaa
      601 aggattcagc gcgtggagcc gagccgtgat ccggaatcgg agctcaaagt gctccgcgag
      661 cgagtcgtgc aactcgagcg tgcgatgtcc acccgctcgg atccgttgct cgcggcgctc
      721 ttgcaaaacg cggccgcctt tctgaccgtc attacgcccg aggggcgtct catggccacg
      781 gggcgagaat cggagggatt cggctcggtc gtcgggcgta gcgtgctcga gttcacgccg
      841 ccgggctcgc atgacacggt catgcaggcg ctggcgaagg tgaacgaaac cttgcagccc
      901 gtcacgtacg aagcggcagg ctatggcgaa aatggcgagc cggaccacgt gtatcaagtg
      961 cgcgccgtgc cgatcgtcgc cgaaggtcgg gtcgaatcga tcgtggtcgt accgacggac
     1021 atcaccgagc gcgtgcgcct cgagcgttcg ctgcgcgaga gcaacgagag cttgcgcctc
     1081 gcggtcgcgg cctccggcat gggcttttgg cgctgggacg tggcggggga tgtcatctac
     1141 tgggatccgc ggctgtgcga aatttacggt gtcgagcagg cgccgcccga ctatcgacgc
     1201 tacgtcgagc tgattcaccc ggaagacctc ccgatcgtgg aggccgccgt gcgacgagcg
     1261 ctcgagcagg gcacgtaccc gacgaccgag caccgcatca tacgcgcgag cgacggtgcc
     1321 gagcgctggt tcttggcggc ggcgaccgtc ggacgtgacg agggcggacg ccccgtcctc
     1381 ttgcatggcg gcggactcga catcacggat cgcaaacagc tggctcgtca gctcgagctg
     1441 gccgagcgcg tgcaagccgt cggccagctg gcggcgggca tcgcgcacaa tttcaacaat
     1501 ctgttggcgg tgatcgtgcc gaccttgtcg ctcgcggtcg aggaaccgac accggaagac
     1561 acgagcgcgc tcagggccgc gctcaccgcc gcactccagg cgcgcgagct cgttcagagc
     1621 atgttcgcgc tcacggcggc ccccgatgcg ctggccggcg gcagcgcgga cgcgagtgac
     1681 gtcgtgaagc gcacggtcgc catgtgtcgc gccaccttcc cgcgcgagat cgacatttcg
     1741 tgcagcatcg agccggcgcc ggcgcccgtc ggggtcgagg cgagcagcct cgagcaaatc
     1801 gtgctgcacc tgctcaccaa cgcgcgtgac gcgatcgaag cgcagccgcg cggcgtggcc
     1861 gaaatccgcg tcatggtcgg ctacccgcga gagaacgcgg cgggcgtcgc gcgcatcacg
     1921 atcgccgaca gcggcgtcgg gatgaacgac gagacgcgga gccggatctt cgatcccttc
     1981 ttcacgacca aagcccgcca gcgcggcacg ggcctcggtc tggcgaccgt cgcggcgcgg
     2041 gtgcgcgacg cgcgcggaac catcgagtgt cgcagcgagc ccgcgcgggg cacgaccttc
     2101 agcctggagc tgccattgcg ttcgagctcg ccctcgccgc aggcggaaca gcgcgcgccc
     2161 atgccggcgc gcctgtcggg ccgcgtcctg gtcgtggacg acgaggatct agtgcgcgcg
     2221 actctcaggc gcatcctcaa gcgtgcaggc ctggaggtat tggaggctgc gagcgcgccg
     2281 gaagcgcgcg ccctactcga gcagacgccc gtcgatctgg tcgtgctcga cgattccatg
     2341 ccctacgagt ccggtctcgc ggcggtcccg tcgctgcggg cccgcacgca cgcgcccttc
     2401 gttctcttca ccggccatgc cccggcggtg ccggacggcg tggcggccct cgtgcgcaaa
     2461 ccggctcgtc ccgacgagct gctgcgcgtc gtgcacgacc tgctcgccaa agcgaagtcg
     2521 cgcgagccgt cgtagttcgg cgctacgacg attgtccgcc gaaactccaa tgctgacggt
     2581 cgagcgtcga gcgtgagccg ccgaatcgtt gctgttcttt ccgcggctct gaacctacac
     2641 tcctcggcgc ctcatccggc aggcgagaat cggagaagca catggcaacg gacgaaaatg
     2701 gcagctcgaa tctcggccgt cagttgctcg agcgtgcgaa aacggcgaaa gaccaggccc
     2761 aatcctccgt gtccgagctc gccgccaggg cgactgaaac ggcgaccggc gcggcgggcg
     2821 agctccggga tcaagtggcc ttgaaggcgt ctgagctgag ggacgcgggc ctcgacaagc
     2881 tcaccgaaac gctgaacgac ttcaacgccg cgctgccggt gctgcgggaa gccggttata
     2941 ccttgagcgg tgtggaaatc ggcatcggcc tgccaccgaa ggtcatggcc gggttcgtcg
     3001 tctcggacga ggtcgagccg gaaaatatcg cgcgcatcgt cgacgaacac gccgacaaga
     3061 aattcaccgt cctgctcatg aagaccatgc atcaagcctg gcagctccaa gccagaatca
     3121 aactcatcgg cggcctcaag ccacgtggtc tgtccgtcga gctcgggctc gtgccgagcg
     3181 tcacgatcca gttcggttga agcagttgaa aagcggtatt ggattcgggg cgagccatgc
     3241 gttctcgctg ctgacgatcg tggcgctcgg ggtcgtcgcg agcttggggc gtcattcgct
     3301 cgggtggacg ctgttcgcca tcgtggcgct cgcgctggcc gtcacgacgg ccgtgcacca
     3361 cgccgaggtg atcgcggcgc gggtcggacc gacgctcggt gcgctcgtgc tcgcgctcgc
     3421 ggtcacggtg atcgaagtcg gcttgatcgt gtcgatgatg acgaacgaca cgccggattc
     3481 cgccgtcgtg gcgcgcgata ccgtgtactc ggccgtcatc atcgtcacga acggcatcct
     3541 cggcgtctgc ctgctcgtcg gcggcttgcg cttcaaggag ctcggcttcc acgcgggcgg
     3601 cactaactcg ctgcttgccg tgctcgccgt gctttccggt ctcactctcg tattgccgaa
     3661 ctttacgacc tccacaccgg gacccgtcta caactcggcg cagctcgtgt tcgcgtccgt
     3721 cgcctcgctc gtcctttatg gctgcttgct cttcgctcag accaagacgc acaaggatta
     3781 cttcgagcag cccgccgtgg ccggcgaagc gccgctcgcc gaccattcgg cgccgactct
     3841 cggcatggca cggctcagct tcgcttgcct catgctgagc ctcgtgtcgg tgatcggtct
     3901 cgccaaaaag ctgagccccg cgatcgaagc gggcatcgac gccgccggag cgccgcgcgc
     3961 aacggtcggt atcgtcatcg cgctgctcgt cctcgcgccc gagttgttcg cggccttgtc
     4021 ggccgctcgt cagaatcggc tacaaaccag cctgaacctc gcgctcggct cgggcgccgc
     4081 cagcatcgcg ctcacgatcc cgacggtcag cgtcttcgcc atcgcgacgg gccgttcgct
     4141 cgtgctcggg ctcgactcga agaacatcgt gttcctcacg ctgacgttcc tgacgagcgg
     4201 tctcacgctc gggcgcggca gcggcacggc gctccagggg ctcacgcacc tcgtgctgct
     4261 ctgtgcgttc gtcgcgtttg cgttcgttcc ctgagctcgg agtagctccg gggcggccac
     4321 gtgcactcag cgcgcgacgg ttcgtagcgg tcgcgactct cgcgcgttag ccccgtcagg
     4381 tcgcgcgcac gtcgcgcaca cgcacgcgcg gtcgcgtgcc gcgtcgggaa tgcgtccgag
     4441 gacctcggcc gggatctcga tctgacggca ccagcacgct gccacctcgt tcccggcggt
     4501 catcgcgcag ccgttcggcg cgccgcacaa cgggcatcgg ctcggatctg gctcggagag
     4561 catggtttcg cagtgtactt gacgccggct cggcgggagc gcatcttatt ctcccattca
     4621 gatacaagga taaatgagtc tttccgagta cgtggacacg ctgaacctgc tgggcgacga
     4681 aagccgtctg cggctctgcg cgctcctgcg cgaccgggag ctctgcgtga ccgacctcgt
     4741 gcgcgtgacg ggcatcgcgc aatcgcgggt gtcgacgcac ctcggacggc tgcgcgacgc
     4801 ggggttcgtg cgcgaccggc gtcaaggggc acagtccttc tacgcactcg cggagaccgc
     4861 gctgccgccc gcggcgcacg ccgtgctcga cggcgcggcg ggttcggccg atccgacgct
     4921 cgccggtgac cagcggcgcc tcgccgagct cgaggcggaa cggcgcgggg ggctgccgga
     4981 tttcgcgccg gacgatctcg agcgttacta ctcgcccggt cggacctggc agtcactgtc
     5041 cgccggcatc gcgggtttgt tggatttggg ggacgtactc gacgtgggcg cgggtgacgg
     5101 cgctgcggcc gcggtgctcg cgccgtattg ccgttcgctc acgtgcatcg acgtgaacgc
     5161 gcgcctggtc gaggtcgcga cccagcgcct cgcgaagttt tcgcacgctc gcgcgctcac
     5221 ggccgacgtg cacgcgctcc ccttcgatgc ccacgcgttc gacagcgtgc tcctcttcca
     5281 cacgctcacg tacgcggccg atccgcccaa ggcgctgcgc caatgcgcgc gcgtgctacg
     5341 tcccggcggc aggctcgtgg tcttgtgcct cgatcggcac gagcagcagg aaatcacggc
     5401 ccgttacggc gagctccacc cgggcttcac gccggacgca ctgcgcgaac tcttggtcgc
     5461 cacgggcctc gacgtgcggt cggcgcacgt ggcatcacgc gagctcaaaa aacctcacct
     5521 gcaagtagtc ctggcggtcg cgaacaaggc cgccgttcct tcgagctgaa gcatcgtcgc
     5581 catggaaaac ctacatcccc ttcaaaaact cctgcgtgag cgcatcgcca tcatcgacgg
     5641 cgccatgggt acgaccatcc gcacctacgg catgaaggag gcggacatcc gcggcgaacg
     5701 cttcaagaac gcgagcaagg atctgctcaa caacggcgat ctcttctccc tgacgcagcc
     5761 gcagatgatc ggcgacatcc atcggcgctt tctcgaagcg ggcgccgaca tcatcgagac
     5821 caacacgttc ggcgcgacca cgatctcgca gagcgagttt ttcgtcgacg acccgcgcga
     5881 gcacggcggc aagaaggacc cggaattcta ccaaaagatc ctggaaaatc cgttcctgat
     5941 cgcgctcgcc gccgagatca acgaagcctc cgcgcgccag tgccgcgagt gggcggaccg
     6001 cgtcgggaac aacgacggcc ggcaacgctt cgtcgcgggt gcgatcggcc cgctcaccgt
     6061 gtcgctctcg aactcaccgg acgccgacga cgccggcttt cgtgtcgtca cgttcgatca
     6121 ggtcaagcag gcgtacgtcg agcaggtgcg agcgctcatt cgtggcggcg tcgatacgtt
     6181 gctcgtcgag accatcttcg actcgctgaa cgccaaggcg gcgctcgtcg cgattcagga
     6241 agtgttcgaa gcggacggcg tgaaattgcc gattcaaatc tcggcggccg tggggcgcgg
     6301 cggcgagacc atgatttcgg cgcagacgat cggggcgtat tggaacgccg tcgagcacgt
     6361 gcatccgctc tcggtcgggc tcaactgctc gctcggtccg gacctgatgt acccgttcct
     6421 cgccgagctc gcgcaaaagt cgagcacggc gatttcggcg tacccgaacg ctggactccc
     6481 gaatccgctc tcggcgaccg gcttcgatct cgagccgccg gacatggcgc gcttcctcgg
     6541 tgatttcgcg cgctccggcc taatcaacat cgcgggcggc tgttgcggca acacgcccga
     6601 gcacatcgcg gcgatcgcca aggcgctcga gcacgcgccg ccgcgcgcgt acacggcgga
     6661 accggacgcg acgagcgcta ccgcgccggc agcggaggcc aaatcggcga cgagcgaacc
     6721 cgcactcgag ctgaactcgc cgtccgtcgc cgccgcgtcc ggcgccacag cgcgcgagtt
     6781 tcgtccgttg cgcctctccg gctcgcaacc gttcacgcaa cagcagggcg tctacatcat
     6841 gatcggcgag cgcaccaacg tcgccggctc gcccaagttc gccaagctcg tcaaggacaa
     6901 caaatacgaa gaggccgtga gcgtcgcgcg ccagcaagtc gaaaacggcg ccaacgtgat
     6961 cgacatctgc atggacgagg gcatgatcga cggcgtcgcg gcgatgaagc gcttcctgtc
     7021 gctgctcgcg agcgaacccg aggtcgccaa ggtcccgttc atggtcgatt cctcgaaatg
     7081 ggaggtgatc gaggcgggcc tgaaatgcct gcagggcaag ggcatcgtga actccatctc
     7141 gctcaaggaa ggcgaggaca agttccgcca gaacgcgcgt cacatcctgc actacggcgc
     7201 cgccgtcgtc gtgatggcgt tcgacgagca gggtcaggcc gcgacttacg aggacaagat
     7261 ccgcatttgc cggcgcgcgt acgacatcct cacggagctc ggcttcccgc cggaagacat
     7321 catcttcgat ccgaacatcc tcacggtcgc gaccggcatc gaggagcaca acaactacgc
     7381 cgtcgatttt ttcaacgcga cggcctggat caagcaaaac ctgccgcacg ccaaggtgag
     7441 cggcggcgtg tcgaacgtgt ccttcagctt ccgcggcaac aacaaggtcc gcgaggcgat
     7501 gcactcggcg ttcctttacc acgcgatctc agccggcatg gacatgggc
//
LOCUS       DATIML010001244         3117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1418220, whole genome shotgun sequence.
ACCESSION   DATIML010001244 DATIML010000000
VERSION     DATIML010001244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1418220"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..963
                     /locus_tag="VLJ38_21490"
     CDS             <1..963
                     /locus_tag="VLJ38_21490"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSU42175.1"
                     /translation="REANLTAEELARPEQRLPLRKFVTLIEAASRSTGDDCFGAHLGE
                     ICSLRELGLPGYLATFAPSVAQALESFARYYYLLGDATDVRFEERGGRAAFTYRVVDP
                     GSWPRRQDAEQVLTMIVSLIREWVGPSFVPACVWFEHAKPTDCAELERIFGCAVRFDC
                     ETNTVWFDRATAASKNPKADERLFRLLSWFAEKATATGGHASVPVLTFREQVLASIDT
                     CANLGNASIHSVSRALGLEARTFQRRLSAERTSFRELFEEYLQREAVKLLSRPELGEK
                     EIAVRLGYGSLNAFIRAFRRWNGVTPGQFRARSATLSRAVSRLS"
     gene            1166..1900
                     /locus_tag="VLJ38_21495"
     CDS             1166..1900
                     /locus_tag="VLJ38_21495"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU42176.1"
                     /translation="MSAFLAIFALWSFLSHRAFVNPVFVPTPSDVWQAARAIFADENL
                     WLDVKVSFLRVTAGFALAALIGIPLGLAMGSFKVIEGLLQPLTDFVRYIPVPALIPIC
                     MVLFGIDELSKIMLIWLGTFFQLVLMVADETRRVPYELLQVSYTLGARRREVMRLVIL
                     RAALPGIFDALRLCNGWAWTYLVVAELVAANEGLGYRVLKFSRFLQTPKIWVYLVILG
                     LIGFGLDFAFRHLNRRLFHWADTGKA"
     gene            1900..2745
                     /locus_tag="VLJ38_21500"
     CDS             1900..2745
                     /locus_tag="VLJ38_21500"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSU42177.1"
                     /translation="MLDVRGLKKTYAGKRGATEALTPASFFVEEGAFVTLLGPSGCGK
                     STVLRLVAGLENATAGEILLDGAPVDGPGPERGMVFQSYTLFPWLNVLDNTCFSTELK
                     CNRAGRTPGKAEQLERARSLLELLGLSDFHAAFPRELSGGMKQRVAIARAVTNRPKLL
                     LMDEPFGALDAQTREEMQALMLTLHAHERTSVLFVTHDVEEALYLSTRILVFSARPGR
                     ILRDMTVPFGPSRERQPELKLLPEFSELKRELFHLLHPGTDSRAGRAALLDKLLKPQP
                     ERMHP"
     gene            2742..>3117
                     /locus_tag="VLJ38_21505"
     CDS             2742..>3117
                     /locus_tag="VLJ38_21505"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSU42178.1"
                     /translation="MNRCSKLLRAALSAGLVFFLAFAPAVEAAPPAPLKTYKVGFNAW
                     IGSIAFFVAQQKGFFKDAGLDVQAKSFSSPGDGLKPLLSGDLDAVLSTADSVLTVLDK
                     APGQLKVVYLTDTSAGADAILAK"
BASE COUNT          487 a         1012 c         1005 g          613 t
ORIGIN      
        1 cgtgaagcaa acctgacggc agaggagctc gcgcgtcccg agcaacgcct gccgctccgc
       61 aaattcgtca cgctgatcga ggccgcgagc cgctccacgg gcgacgactg cttcggcgcg
      121 cacctcggtg agatctgcag cttgagggag ctgggactgc ccggttatct cgcgaccttc
      181 gccccgagcg tcgcgcaagc gctcgagagt tttgcccgct actattactt actgggcgac
      241 gccacggacg tgcgcttcga ggagcgcggc ggtcgcgcgg cgttcacgta ccgcgtcgtc
      301 gaccccggca gctggccgag acggcaggac gccgagcagg tcctcacgat gatcgtctcg
      361 ctgattcggg agtgggtggg cccgagcttc gtgccggcgt gcgtgtggtt cgagcacgca
      421 aaacccacgg attgtgctga gctcgagcgt atttttggct gcgccgtgcg tttcgactgc
      481 gagaccaaca cggtttggtt cgatcgcgcg acagccgcca gcaagaatcc gaaggccgac
      541 gaaaggctgt ttcgcctttt gtcgtggttc gcggaaaaag ccacggcaac gggcggccac
      601 gcatccgtgc cggtgctcac gtttcgggag caggtgctcg cgagcatcga cacctgcgca
      661 aatctcggca acgcgagcat ccattcggtc tcgcgcgcgc tcggcctcga agctcgcacg
      721 ttccagcgca ggttgagcgc cgaacgcacc tcgtttcgtg aactgttcga ggagtacctg
      781 cagcgtgaag cggtcaaact gttgagccgt ccggagctcg gcgagaaaga gatcgccgtg
      841 cgactcggtt acggcagtct gaacgcattc attcgcgcgt tccgccgctg gaacggcgtg
      901 acgccggggc aatttcgcgc tcgcagcgcc acgctgtcgc gagcagtgag ccgtttgtcg
      961 tgagctgtca ggtgcgctct ctctactgct tcggtacatc agctgtcacg gcatgacgct
     1021 cttggctcga gacactctct ccgttgagcc ggttccctca cctgatcgcg ccgcagcacc
     1081 tgccgcgagt gcgcgggcgt ctaagcgggt acgctggttc gagctccgcc gcgagatccc
     1141 cgcctggagc taccgcgcgc tggcggtgag cgcctttctg gcgattttcg cgctgtggtc
     1201 gtttttgagc catcgcgcgt tcgtcaatcc cgtcttcgtg ccgacgccga gcgacgtgtg
     1261 gcaagccgcg cgtgcgatct tcgccgacga gaatttgtgg ctcgacgtga aggtgagttt
     1321 cttgcgtgtg accgccggct tcgcgctcgc ggcgctcatc ggcattccgc tcggcctcgc
     1381 gatgggatcg ttcaaggtca tcgaagggct cttgcagccg ctcaccgatt tcgtgcgtta
     1441 catcccggta ccggcgctga ttccgatttg catggtgctg ttcggcatcg acgagctttc
     1501 gaaaatcatg ctgatctggc tcggcacgtt ctttcagctc gtgctgatgg tggccgacga
     1561 gacgcggcgc gtgccctacg agctcttaca ggtgagctac acgctcggcg cgcgccggcg
     1621 ggaagtgatg cggctcgtga tcctgcgcgc ggcgctgccc ggtatcttcg acgcgctccg
     1681 gctgtgtaac ggctgggcgt ggacgtatct cgtcgtggcc gagctcgtcg ccgccaacga
     1741 agggctcggc tatcgcgtgc tcaagttttc gcgcttcctg cagacgccga agatctgggt
     1801 gtacctggtg atcctcggtc tgatcggctt cggtctcgat ttcgcgtttc gtcatttgaa
     1861 ccgccgcctc tttcactggg cggacacggg caaggcgtga tgctcgacgt tcgcggactc
     1921 aagaagacct acgcgggcaa acgtggcgcg accgaagcgc tgacaccggc gtcgtttttc
     1981 gtcgaagagg gcgcgttcgt gacgctgctc gggccgtcgg gctgcggcaa atcgacggtg
     2041 ctgcggctcg tcgcggggct cgagaacgcg acggcgggcg agatcctgct ggacggggcg
     2101 ccggtggacg gccccggccc cgagcgcggc atggtgttcc agagctacac gctcttcccg
     2161 tggctcaacg tgctcgacaa cacgtgcttc agcacggagc tcaagtgtaa ccgcgccggc
     2221 cgcacgccgg gcaaagccga gcagctcgag cgcgcgcgct cgctgctcga gctcttgggc
     2281 ttgagcgact ttcacgctgc tttcccgcgt gagctcagcg gcggcatgaa gcaacgcgtc
     2341 gcgatcgcgc gagcggtcac caatcgtccg aagctgctct tgatggacga gccgttcggg
     2401 gcgctcgacg cccagacgcg cgaggagatg caagcgctga tgctcacgct gcacgcgcac
     2461 gagcggacga gcgtcttgtt cgtcacgcac gacgtcgagg aggcgctcta tctttcgacg
     2521 cgcatcctcg tgttttcggc ccgtcccggc cgcatcctgc gtgacatgac ggtgccgttc
     2581 ggcccgagcc gcgagcgtca gcccgagctc aagctcctgc ccgaattcag cgagctcaag
     2641 cgcgagctct ttcacttgct gcatccgggg acggattcgc gagcgggtcg cgcggccctg
     2701 ctcgacaagc tcctcaaacc ccaacccgag agaatgcacc catgaatcga tgttccaaac
     2761 tactacgagc ggcgctctcc gctggtctcg tcttctttct cgccttcgct cccgcggtcg
     2821 aggccgcgcc tcccgctccg ctcaagacct acaaggtcgg cttcaatgcc tggatcggct
     2881 cgattgcatt cttcgtcgcg caacaaaagg gcttcttcaa ggacgctggt ctcgacgtcc
     2941 aggcgaagag cttcagctca cccggcgacg gcttgaagcc gctcttgagc ggcgatctcg
     3001 acgccgtgct cagcaccgcc gacagcgtgc tcaccgtgct cgacaaagcg cccggtcagc
     3061 tcaaggtcgt ttacctcacg gacacctcgg cgggtgcgga cgcgattttg gcgaaga
//
LOCUS       DATIML010001245         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_258460, whole genome shotgun sequence.
ACCESSION   DATIML010001245 DATIML010000000
VERSION     DATIML010001245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258460"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..793)
                     /locus_tag="VLJ38_21510"
     CDS             complement(53..793)
                     /locus_tag="VLJ38_21510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU42179.1"
                     /translation="MDSSGTHDANRAYYDAFSAGYENHRGDNDPGGYHDLLDELESEY
                     VKRYGAGRDVLEVGCGTGLVLSRIAQFARSARGVDLSPGMLAKAQARGLDVVLGSATA
                     LPFEDNRFDVTCSFKVLAHVPEIERALSEMVRVTRPGGIVLAEFYNPYSLRALLKRFG
                     PAGRIAAAANESHVYTRFDSPFGLKKLLPPGTLLVGARGVRIVTPTAKVMKSALGRRV
                     FRAAEHALCDSPLRVFAGFYVAAIEKRG"
     gene            complement(881..>1527)
                     /locus_tag="VLJ38_21515"
     CDS             complement(881..>1527)
                     /locus_tag="VLJ38_21515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42180.1"
                     /translation="CNAPAAPALARTAHDLIEVAGEPPYGPEAALELKQEQQELEQGL
                     ARRAESGRARDLIVLTVLIGAMAFAALSNLVVTRWFPALAALASLLVIVGYVMRSRLR
                     RVERAALSRIGEALSGMLAAAPTTRSARPSLHSIDGGCTVCGENVFLLAQDAALGTAL
                     PTLGIHELRICKHCGFVSGQAEDAAALAKGALEELSVPISPEDEASSDDTEHDG"
BASE COUNT          259 a          504 c          517 g          247 t
ORIGIN      
        1 tgcgctgccg ggtctcgagc gcccactccc tccttctagg agcggcgcgg gctcaaccgc
       61 gtttctcgat ggcggcgacg tagaaaccgg cgaatacgcg gagcggtgag tcgcacaggg
      121 cgtgctcggc agcgcggaag acgcggcggc cgagtgcgct cttcatcact ttggcggtgg
      181 gcgtgacgat cctcacgcct cgggccccga ccagcaaggt gcccgggggc agcaattttt
      241 tcaggccaaa gggcgaatcg aaacgcgtgt aaacgtggct ctcgttggca gcggcggcga
      301 tccgcccggc ggggccgaag cgcttcagca gggcgcgcag gctgtacgga ttgtagaact
      361 ctgccaagac gatgccgccc gggcgcgtca ctcgcaccat ttccgaaagt gcccgctcga
      421 tttccggcac gtgtgcgagc accttgaaag aacaggtcac gtcgaaacga ttgtcctcga
      481 agggcagggc agtcgcggag ccgagcacga cgtccaagcc gcgcgcttgc gccttggcca
      541 acatgcccgg agaaagatcg acgccgcgcg ccgaacgcgc gaattgcgcg atgcgcgaca
      601 gcacgagccc cgtgccgcat cccacctcga gcacgtcacg tccggcgccg tagcgcttca
      661 cgtattccga ctccagttcg tcgagcaggt cgtggtagcc gcccggatcg ttgtcgccac
      721 ggtggttttc gtagccggcc gagaaggcgt cgtagtaggc gcgattggcg tcgtgtgtgc
      781 cggagctgtc catcgaatgg cgaaggtgtc ccgtaaagcg caggaaagca aggaaagagc
      841 ggctcttcga gctcgcgcgt tgcgccattg gcgcgcgggc tcagccgtcg tgctcggtgt
      901 cgtcggaact cgcttcgtct tcgggcgaaa tcggcacgct cagctcttcg agcgcgcctt
      961 tggccaaggc cgccgcgtct tcggcttggc cactgacgaa accgcaatgt ttgcagatcc
     1021 ggagttcatg gatgcccagc gtcggcagcg cggtgccgag cgccgcatct tgcgccagta
     1081 agaatacgtt ctcgccacac acggtacagc ccccgtcgat cgagtgcagg ctgggccgcg
     1141 cgctgcgcgt ggtcggcgcg gcggcgagca tgcccgagag cgcttcaccg atccggctca
     1201 gtgccgcgcg ctcgacccgg cgcaagcggc tgcgcatcac gtagccgacg atcacgagca
     1261 gcgacgcgag cgcggccaac gcgggaaacc agcgagtaac gaccaagttg gacagcgcgg
     1321 cgaacgccat tgcgccgatc agcaccgtga gcacgatcag gtcgcgtgcg cggccgctct
     1381 ccgcgcgtcg agccaaaccc tgctcgagct cttgttgctc ctgcttcaac tcgagcgccg
     1441 cctctgggcc gtacggcggc tcgcccgcca cttcgatcag gtcatgcgcg gtacgcgcaa
     1501 gcgctggagc ggctggcgcg ttgcagg
//
LOCUS       DATIML010001246         3025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3726729, whole genome shotgun sequence.
ACCESSION   DATIML010001246 DATIML010000000
VERSION     DATIML010001246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3726729"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VLJ38_21520"
     CDS             <1..291
                     /locus_tag="VLJ38_21520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42181.1"
                     /translation="TRIVEKRVLVPVAAPTPVAPEVQPHPAGSVATTQTPPPSNAESP
                     KPAATERVVSKSDASAAPAKSWRKDDPGPLEQAASTSPRHGQRVGFPTNPGF"
     gene            complement(300..878)
                     /locus_tag="VLJ38_21525"
     CDS             complement(300..878)
                     /locus_tag="VLJ38_21525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HSU42182.1"
                     /translation="MSAVGRPGELQSVCVFCGSSKGHDPAFVRAAEAFGRLLAGRGIT
                     LVYGGGHTGLMGALADAALAAGGRVIGVIPAGLAERELLHSRLSEQHVVTGMHERKAL
                     MASLASAFVALPGGLGTLDELFEIWTWAQLGLHAKPIGLLDVNGFFRPLLELTSQIVE
                     HGFARRENLELVLVDDHAERLLERLADRLRAE"
     gene            complement(875..1531)
                     /gene="yfcF"
                     /locus_tag="VLJ38_21530"
     CDS             complement(875..1531)
                     /gene="yfcF"
                     /locus_tag="VLJ38_21530"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: protein motif:HMM:NF011693.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
                     /protein_id="HSU42183.1"
                     /translation="MTEPTFTLFGERKLDSPFVLTAFVALKEKGVPFSFRALDLGRGE
                     QREPDFVARSLTSRVPTLSAGSFSLSESLAIVEYLDELLPAPAHARLLPESREERARA
                     RQVLGWLRSDLAALRNERPTSSIFFDHVGAPLSDAARRDAEKLVSIATTLLGGRAQLF
                     TTWSIADLDLALALMRLVANGDAVPAPLRLHAEAQWRRPSVAAWVARTRPAASEAWQE
                     "
     gene            1940..>3025
                     /locus_tag="VLJ38_21535"
     CDS             1940..>3025
                     /locus_tag="VLJ38_21535"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU42184.1"
                     /translation="MSARILVVDDSPTIRKVVSSILLDREYEPLLAEDGQAALDLLVT
                     EKVDLVLLDFVMPKMNGYQFCRELRANPELKNLPVVLMSAKGDKIRGQFVEQTGAIDA
                     ITKPFDARGLVAVVEGALKRQEEGRAGPVPDAAAMPADDANLLESLRPSRTSLSDDPA
                     LRRVQASQEFAIAIERLVSAELKKLRKLPLGTEDLVKRSIERAIRPETMAALATLVRA
                     LSYGENTREVLAGDVSVISIAEILQLLDLQRQTGALSVFTREAEITLYVRNGRIDFAS
                     WRGLRSEFLFGRYLVEDGATTKDQLASALDTKNAGKLVGEALLELGHATREAVVRALV
                     RQTSELVYEVVRWKNGRFSFSVGVDHPP"
BASE COUNT          536 a         1009 c         1025 g          455 t
ORIGIN      
        1 acccgcatcg tggagaagcg cgtgctggta cccgtcgccg cgccgacccc tgtcgccccc
       61 gaggtgcagc cgcatccggc gggcagcgtc gcgaccacgc agacaccgcc gccgtcgaac
      121 gccgaatcgc cgaaacccgc cgcgacggag cgcgtcgtga gtaagtcgga tgcgagcgcg
      181 gcgccggcga agtcatggcg caaggacgat cccgggccgc tcgaacaagc cgcctcgacc
      241 tcgccgcggc acgggcaacg cgtgggtttt ccgaccaacc cgggcttctg aacacgccgt
      301 cactcggcgc gcaggcgatc ggcgagccgc tcgagtagcc gctcggcgtg gtcatcgacc
      361 agcacgagct cgaggttttc gcgccgcgcg aagccgtgct ccacgatttg ggacgtgagc
      421 tcgaggagcg ggcggaagaa gccgttcacg tcgagcagac cgatcggctt tgcgtgaagc
      481 ccgagctgcg cccaagtcca aatctcgaac agctcgtcga gcgtgccgag gccgcccggc
      541 agcgcgacga aggcgctcgc cagactggcc atcagcgctt tgcgctcgtg catgccggtg
      601 acgacgtgct gttcgctcag gcgcgagtgc aagagctcac gttcggcgag tcccgccggg
      661 atcacgccga tcacgcgacc gcccgccgcg agtgcggcat cggcgagggc gcccatgaga
      721 ccggtatgac cgccaccgta gacgagcgtg atgccgcgcc cggcgagcaa gcgcccgaat
      781 gcttcggccg cgcgcacgaa cgcgggatcg tgacctttgc tcgagccgca gaaaacgcag
      841 acgctttgga gctcgccggg ccgtcccacg gcgctcattc ttgccaagcc tcgctagcgg
      901 ccggccgggt ccgcgcgacc caagccgcga cgctcggccg ccgccactgc gcttctgcgt
      961 gcaggcgcag gggcgcgggg acggcatcgc cgttggcgac caagcgcatg agcgcgagcg
     1021 cgaggtcgag gtcggcgatg gaccacgtcg tgaagagttg ggcccgccca ccgaggagcg
     1081 tggtcgcgat gctgacgagc ttctcggcgt cacggcgtgc agcgtcgctg agcggcgccc
     1141 cgacgtgatc gaagaagatg ctgctcgtgg ggcgttcgtt gcggagcgca gcgagatccg
     1201 agcgcaacca gccgagcact tgccgcgccc gtgcccgctc ttcacgcgac tcgggtaata
     1261 gccgcgcatg cgcgggcgcc ggcaggagct cgtccaaata ttcgacgatc gccagcgact
     1321 cgctgagcga gaagcttccc gccgacagcg tcggcacgcg cgaggtgagg gagcgcgcga
     1381 cgaaatccgg ctcgcgctgc tcgccacgac cgaggtcgag ggctcgaaac gagaagggga
     1441 cgcccttttc tttgagtgcc acgaacgcag tcaaaacgaa cgggctatcg agcttacgct
     1501 cgccgaacag ggtgaacgtc ggctccgtca tgcaccgagc ctagcggtac gcgcccggcc
     1561 cgaggaggtc cattcgccct tagactcgag ttgaatggct ttggaagatc agatctcgat
     1621 cggcgcgggt cgccaatcgc cgacgtgaaa ttccggcgag accggcgctt gggccgctta
     1681 ggcgagctac cgacgcagga ctttcggcag gatcttttcg cgtgcgcgac aacgaagaag
     1741 tctcggaacg agctgccctt cgccaaagcg ataggcggct tagctgagct gacggctgca
     1801 atgcaccggc ctcgccggct ctcacgtagc tcgcgggctc tgtcggcgat cgcgatcttt
     1861 tcttccaaga ccgctcgagt cgaacctaga ggcccttgac cgccgttgcg cgaggccggc
     1921 accatcgagc gattcgggaa tgagtgctcg catcctggtc gtcgacgaca gcccgaccat
     1981 tcgcaaggtc gtgagctcca ttctcctcga tcgcgaatac gagccgctgc tcgcggaaga
     2041 cgggcaggcc gcgctcgact tgctcgtcac cgagaaggtc gatctcgtgc tgctcgattt
     2101 cgtgatgccg aaaatgaacg gctatcagtt ctgccgcgag ctgcgcgcca accccgagct
     2161 caagaatcta cccgtcgtgc tcatgagcgc caagggcgac aaaatccgcg ggcagttcgt
     2221 ggagcagacc ggagccatcg atgcgatcac gaagccgttc gacgctcgcg ggctcgtcgc
     2281 cgtggtcgaa ggcgcgctca agcggcagga ggaaggccgc gccggccccg tgcccgacgc
     2341 cgcggccatg cccgctgacg acgcgaacct gctcgagagc ctgcggccga gccgcacgag
     2401 cctgagcgac gacccggcgc tccgccgcgt gcaagcatcg caagagtttg ccatcgcgat
     2461 cgaacggctc gtctcggccg agctgaagaa gctcaggaag ctgccgctcg gcaccgagga
     2521 tctcgtgaag cgctcgatcg agcgcgcgat acgtccggag accatggccg cactcgcgac
     2581 gctcgtccgc gcgctgagct acggcgagaa cacgcgcgag gtgttggccg gcgacgtgag
     2641 cgtgatatcg atcgccgaaa tcctgcagct gctcgatttg cagcggcaga cgggagcgct
     2701 cagcgtcttc acgcgtgaag cggagatcac gttgtacgtg cgcaacggcc gcatcgattt
     2761 tgcgtcctgg cgcggcctgc gcagcgaatt cttgttcggg cgttacctcg tcgaggacgg
     2821 cgccaccacg aaggatcagc tcgcgagcgc gctcgacacg aaaaatgcgg ggaagctcgt
     2881 gggcgaagcg ctgctcgagc tcggccatgc gacgagggaa gcggtcgtgc gcgcgctcgt
     2941 gcgccaaacc tcggagctcg tctacgaagt cgtgcgctgg aagaacggac gcttttcgtt
     3001 cagcgtcggc gtcgatcatc cgccg
//
LOCUS       DATIML010001247         1864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_841036, whole genome shotgun sequence.
ACCESSION   DATIML010001247 DATIML010000000
VERSION     DATIML010001247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841036"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /locus_tag="VLJ38_21540"
     CDS             complement(<1..777)
                     /locus_tag="VLJ38_21540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42185.1"
                     /translation="MRLLPSLLLGFFTSVNGPAAEAPAQPLAAGMTRSAIAEIDQAIG
                     IALAPKVAKFDASLDTPKRLVTTGGRVIYLPNGCRTVSRPFDLLVHFHGAPTVLEPTF
                     ERSDIDGVLVILNLGIGSGRYDEAFRYPGSFDALLTRTSSALHDLCPNAVSKPARVAL
                     SAWSAGYGAVFRILDHDKDARRIDAVLLADGLHANFEPGGGYEHRIETEQMAPFVTFA
                     DEAVSGKKLFAITHSSILTPYASTTQTSDFLLAQENVERVP"
     gene            899..>1864
                     /locus_tag="VLJ38_21545"
     CDS             899..>1864
                     /locus_tag="VLJ38_21545"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSU42186.1"
                     /translation="MRKQAAFIAGKRRETGACDVIASPFDGTPVSEVVRATPQDVDVA
                     LEAAYGARRVTRAQPAHVRALFCDNVAQRLRERRAELSELIARESGKPIRYARAEVDR
                     AVTTFTLAAGVARTLGGELLPADVSAKGEGKLLVYRRVPRGVVAAISPFNFPLNLAAH
                     KLAPALAVGAPIVLKPPHQAPSAALAVAEITGELGVPEGSVSALHAQPEVAEMLAKDP
                     RVAVLSFTGSDRVGFHLKGLDPKKQVLLELGGNAPAIIDEGVKLERLIPGLVEACFAS
                     AGQVCIKAQRLFVHQSLYDEFVERFVATTRALPTGDPLDERTIVGP"
BASE COUNT          322 a          612 c          638 g          292 t
ORIGIN      
        1 cggcacacgc tcgacgtttt cctgcgcgag caagaaatcc gaggtctggg tcgtgctcgc
       61 gtacggcgtc aagatcgacg agtgcgtgat ggcgaagagc tttttgcccg acacggcctc
      121 gtcggcgaac gtgacgaacg gcgccatctg ctcggtctcg atccggtgct cgtagccgcc
      181 gcccggttcg aagttcgcgt gcaagccgtc ggcgaggagc acggcgtcga tccggcgcgc
      241 gtccttgtcg tgatcgagga tgcgaaagac ggcgccgtag cccgcgctcc aggccgagag
      301 cgcgacgcgc gcgggcttgg agacggcgtt cggacagaga tcatgcagcg ccgagctcgt
      361 gcgcgtgagc agcgcgtcga agctgccggg ataccggaac gcttcgtcgt agcggcccga
      421 gccgataccg aggttcagga tcacgagcac gccgtcgatg tcggagcgct cgaaggtggg
      481 ctcgagcacc gtaggcgcgc catggaagtg cacgagcaga tcgaacggac gcgacacggt
      541 gcggcagccg ttcggtaggt agatcacgcg accgcccgtc gtgacgaggc gcttgggcgt
      601 gtcgagactc gcgtcgaact ttgcgacctt gggcgcgagc gcgatgccga tcgcttgatc
      661 gatctctgcg atggccgagc gggtcatgcc cgccgcgagc ggctgtgcgg gtgcctccgc
      721 tgcggggccg ttcactgagg tgaagaagcc gagcaggagc gaagggagta accgcatcgg
      781 tattcagagt taaccggttc acgccaaaag gtccatcaca aagacagcgg aaccacctga
      841 aaaatggctc tcccgtggtc ggccccacac tcacgttgta ggattcctcg cataaaaaat
      901 gcgcaaacaa gctgcattca tcgccggaaa acggcgcgaa acgggcgctt gcgacgtgat
      961 cgcgagtccg ttcgacggca cccccgtgag tgaagtcgta cgtgcaaccc cacaagatgt
     1021 ggatgtcgca ctcgaggcgg cgtacggcgc tcgacgtgtc acgcgcgcac agcccgcgca
     1081 cgtgcgcgct ctcttttgcg acaacgtggc gcaacgcttg cgcgagcggc gcgccgagct
     1141 cagcgagctc atcgcgcgcg agagcggcaa gccgattcgc tacgcgcgcg ccgaggtcga
     1201 tcgcgccgtg acgaccttca cgctcgcggc gggcgtcgcg cgcacgctcg gcggcgagct
     1261 cttgcccgcc gacgtctccg cgaaaggcga aggcaagctg ctcgtctatc gccgcgtgcc
     1321 gcgcggcgtc gtcgcagcga tttcaccctt caatttcccg ctgaacctcg cggcgcacaa
     1381 gctcgccccc gcgctcgccg tcggcgcgcc gatcgtgctc aagccgccgc accaggcgcc
     1441 gagcgccgcg ctcgcggtcg ccgagatcac aggtgagctc ggcgtgcccg agggctcggt
     1501 cagcgctctg cacgcccagc ccgaggtcgc cgaaatgttg gcgaaggatc cgcgcgtcgc
     1561 cgtgctctcg ttcacgggca gcgatcgcgt gggctttcac ttgaagggcc tcgaccccaa
     1621 aaagcaggtg ttgctcgagc tcggcggcaa cgcgccggcc atcatcgacg aaggcgtgaa
     1681 gctcgagcgg ctcatccccg gactcgtcga ggcttgtttc gcgagcgcag gacaggtgtg
     1741 catcaaggcg cagcgcctgt tcgtgcacca gtcgctctac gacgagttcg tcgagcgctt
     1801 cgtggcgacg acgcgcgcgc tgccgacggg cgacccgctc gacgaacgga cgatcgtggg
     1861 cccg
//
LOCUS       DATIML010001248         2688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_551109, whole genome shotgun sequence.
ACCESSION   DATIML010001248 DATIML010000000
VERSION     DATIML010001248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551109"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /locus_tag="VLJ38_21550"
     CDS             complement(<1..823)
                     /locus_tag="VLJ38_21550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42187.1"
                     /translation="MTLVVWTVNEANSADVYAARVDTLGNVLDPAGIPIVTVAFEQGT
                     PAVASDGAGWFVVWTDRRDGASPDIFGARVSANGAVVESQGFAISRDPRDEGRPAVAY
                     DGTNFFVAWSAGRDVRGARVDTGGHVLDSDTILVATRQADGSSSPPRVAVGFDGTNWV
                     AVWDDRRTETGSSMDVLATRVNAAGDVIDQFVVAGTTADESNPAIDCEGAACLVAWDE
                     ANGISAVRTSSGAVLDASHLRVVAQGAWSSIAHDGTNWLVAGLNYVGPSLRVTRVS"
     gene            complement(1307..2629)
                     /locus_tag="VLJ38_21555"
     CDS             complement(1307..2629)
                     /locus_tag="VLJ38_21555"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSU42188.1"
                     /translation="MGDKEPSSLDQALEAWASGDVAAALRIAIAVLEGNQTDALALFL
                     SAYLGAKLGEPKAFGDGLRAAAERATDVGNLPLAIAISGFARELGVDAAPLYDAAATA
                     YARGSNRIKRQAPPALPTAGPRVKALPSSLDQAALGARAAKAVRAAAEHLLTLPSGEA
                     PLPAAPLFSSLDQDALRTLIEIFEPKLLASGQRFVEEGAVGAEAFVIARGEVDVSRHT
                     LRTSGPIHLARLGPGALVGEMALLSRAPRTATVTTASAVILLVARKRELDGAVSKTPA
                     LGREFAEHCRRRMLDNLVRTSPILHSVNPTERADLVQRFTIRTFEPGERLVTQGQTTE
                     GLFLVASGEVSILHHEPSGDETVVARLGPGEVLGEVALVLRRPANADVIANHPTVTLL
                     LPRERFLDAVRAHPQVFVDLYELASRRDDETSSVGGLETAELDESVLI"
BASE COUNT          447 a          936 c          901 g          404 t
ORIGIN      
        1 tggagacccg tgtcacgcgc agggaggggc cgacgtagtt gagcccggcg acgagccaat
       61 tcgtaccgtc atgggcaatg gaggaccacg ctccttgtgc cacgactcga aggtgactgg
      121 catcgagcac ggcgccgctg ctggttcgaa ccgcgctgat gccgttggct tcgtcccacg
      181 cgactagaca agcggcacct tcacaatcga tggctgggtt cgactcgtca gcggtcgtcc
      241 cggcgaccac gaactggtcg atgacatcgc cggccgcgtt cacgcgcgtg gcaaggacat
      301 ccatgctgct cccggtttcg gtgcgtcggt cgtcccaaac ggccacccag ttcgtgccgt
      361 cgaaaccaac ggcgacgcgc ggtggggagg aagaaccatc cgcctgcctc gtcgcaacga
      421 gaatcgtgtc actgtcgagc acgtgcccgc cggtgtccac gcgcgcgccg cgaacgtccc
      481 gaccagcgga ccatgccacg aagaagttgg ttccgtcgta cgccacggcg ggcctgccct
      541 cgtccctcgg gtcgcgcgag atcgcgaaac cctgcgactc cacgacggcg ccatttgcgg
      601 agacgcgggc tccgaaaata tccgggctcg cgccgtctcg ccgatccgtc cagacgacga
      661 accacccagc gccgtcgctc gcgacggcag gggtgccttg ctcgaacgcg acggttacga
      721 tgggaatgcc cgccggatcg agcacgttgc ccagcgtgtc gacgcgagca gcgtaaacat
      781 ccgcgctgtt cgcttcattg accgtccaga ccacgagcgt cacccccgaa gcgttggccg
      841 ctccagctac gtcagactcg gcgacgctcc tcgaagcggg cgcaggggcg aactcgggcc
      901 caatccaggg caccgacgcc gcgacttgat cgagcaacgc ggccgaatgc ggccgtgccg
      961 cggaggctgt cgaaaaccgc gcacccggac taggcggtgc cactcgcgtc gtcgaatcgg
     1021 ggcccggcgt cgacggtgat ccggcgcacc cgctcaggac caatacaacg aacgcaaagc
     1081 atcgacgcag catgacgcgg cctcctgcga ccggcacttg caatgctcat gccccacttc
     1141 gcgcgattca aacggcacgg ggcgccttcg aacaccacgc acagcgacga agatgctgcg
     1201 cgcatcgtcg cacccggcgc aatacttgcc gggagcgtcc tcacgcgccc ctggtttcga
     1261 tcggaacttg ccgtcgatgg cggccaggta agcaaagcgc tccggcttaa atcagcacgc
     1321 tctcgtccag ctcggcagtc tccaggccgc cgacgctgct cgtctcatca tcccgccggc
     1381 tcgcgagctc gtagagatcg acgaaaacct gcgggtgggc gcgcacggcg tcgaggaagc
     1441 gctcccgcgg caagagcagc gtcacggtcg gatggttcgc gatcacgtcc gcgtttgccg
     1501 ggcgcctgag cacgagcgcg acctctccca gcacttcgcc gggaccgagc cgcgcgacca
     1561 cggtttcgtc gccgctcggc tcgtgatgaa ggatcgacac ctcgcccgac gcgacgagaa
     1621 agagcccttc cgtcgtctgt ccttgcgtga cgagacgctc gcccggctcg aacgtgcgga
     1681 tcgtgaagcg ctggacgaga tcggcgcgtt ccgtcgggtt cacgctgtgc aagatggggc
     1741 tcgtgcggac gagattgtcg agcatgcgcc ggcggcagtg ctcggcgaat tcccggccga
     1801 gcgcgggcgt cttgctgacg gcgccgtcga gctcacgctt gcgcgcgacg agcagaatca
     1861 cggcgctcgc cgtcgtgacg gtggcggtgc gaggagcgcg tgagagcagc gccatctcgc
     1921 cgacgagggc gccggggccg agccgcgcga ggtgaatcgg gccggaggtg cgcagcgtgt
     1981 ggcggctcac gtcgacctca ccgcgcgcga tgacgaacgc ctccgcaccg accgctcctt
     2041 cctcgacgaa acgctggccg ctcgccaaga gtttcggctc gaagatctcg atcagcgtgc
     2101 gcagggcgtc ttgatcgagc gacgagaaca gcggcgcggc cggcagcggc gcttcaccgc
     2161 tcggcaacgt caagagatgt tcggcggccg cgcgcacggc tttggcggcg cgtgcgccga
     2221 gcgctgcttg gtcgagcgag ctcgggagtg ccttcacgcg cggtccggcc gtgggcagcg
     2281 cgggcggcgc ctggcgtttg atgcgattcg aaccacgcgc gtacgccgta gccgcagcgt
     2341 cgtagagcgg cgccgcatcg acgccgagct cgcgcgcaaa gccgctgatg gcgatcgcga
     2401 gcggcaaatt gccgacgtcc gtcgcgcgct ccgctgccgc gcgcaagccg tcgccgaacg
     2461 ctttcggttc gccgagcttg gcgccgaggt acgcgctcaa aaagagcgcg agcgcgtcgg
     2521 tttgattgcc ttcgagcacg gcgatcgcga tgcggagcgc ggccgcaacg tcgccgcttg
     2581 cccacgcctc gagcgcctgg tcgagagagc tcggctcttt gtcgcccatt cgtcactctt
     2641 agccgtcccc gctccgcgac gaaagccgcg ccccgcggcg gcacgaaa
//
LOCUS       DATIML010001249         2324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4010391, whole genome shotgun sequence.
ACCESSION   DATIML010001249 DATIML010000000
VERSION     DATIML010001249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4010391"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1572
                     /locus_tag="VLJ38_21560"
     CDS             <1..1572
                     /locus_tag="VLJ38_21560"
                     /inference="COORDINATES: protein motif:HMM:TIGR03936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03936 family radical SAM-associated protein"
                     /protein_id="HSU42189.1"
                     /translation="PTEEDEDVLGIVDVGKNALGVGKRLGRNVKVNVSVSTHVPKPHT
                     PFQWCAMDSLPEVERKQALLRDAVRRVKGLGLKLHDATTSVLEGILARGDRRLGSVIE
                     RAFLGGARFDSWDDHLRLDLWEEALAHFDIDTRPFLGTIAVGARVPWDHLDVGLEDGF
                     LAREYRKALAGRASPPCGKVAGAFIHATNAADAEAEKRRLVCYDCGIACDLGKMRSER
                     LVYLRKLGAHERPAEPAVEIAAEGEPDAPSPKPRPRRARPETFRPARPGGVPQRFRLR
                     FEKVGPAALLGHLDLGRELPRAIRRAGVRLRYSEGFHPKPDLSFGPALSLGIASLDEY
                     VDAKLIDAPAMDELVTRLEAATSGGLRFVAAKPLVAEDPAVSSIVTGARYVIALAEDV
                     VREHGGRAGLEERMQALLARSEAKLRRDVGGVGKIVDVRRFVVELALGGEAAERELAL
                     GGIVGRVVPLVATLVISPTGSAKVSEVVEALFGQALPHLAVRAALFAGAGTPFDLELF
                     RKKPREVVASASVTA"
     gene            complement(1596..>2324)
                     /locus_tag="VLJ38_21565"
     CDS             complement(1596..>2324)
                     /locus_tag="VLJ38_21565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42190.1"
                     /translation="APQAAVREEHDTVRPGARTRSISLPNQRKARSTLPSPEMKPEGG
                     ASASEPRRSEKTRRAIAPTVPAGRRVQVAEPSPSRVAREQSIHAKGAPLPMSADYPRG
                     VAKALGVIGTASVDPGPTQRPLVLLASTDPELVRLFTAWLDLRAAVEETAGAKQLVMR
                     LAELEGKRAVIVLDGKHPGVRPLTLAALADELPAGTTVILWGVQPHLHARMCTISALA
                     EKWTVYGGDATSNEVVAECAKMFG"
BASE COUNT          327 a          799 c          837 g          361 t
ORIGIN      
        1 ccgacggaag aagacgagga cgtgctcggc atcgtcgacg tcggcaagaa cgcgctcggc
       61 gtcggcaagc ggctcggccg caacgtgaag gtgaacgtca gcgtttcgac ccacgtgccg
      121 aagccgcaca cgccctttca gtggtgcgcg atggactcgc tgcccgaagt cgagcgtaaa
      181 caggcgcttt tacgcgacgc cgtgcggcgc gtgaaaggac tcggcctcaa gctgcacgac
      241 gcgaccacga gtgtgctcga aggcattctc gcgcgtggcg accggcggct cggtagcgtc
      301 atcgagcgcg ccttcctcgg cggcgcccgc ttcgattcct gggacgacca cctgcggctc
      361 gatctctggg aggaagcgct cgcccacttc gacatcgaca cgcggccgtt cctcggcacc
      421 atcgccgtcg gcgcgcgcgt gccctgggac cacctcgacg tgggtctcga ggacggcttt
      481 ctcgcgcgcg agtacaggaa ggcgctcgcc ggccgcgcga gcccgccgtg cggtaaggtc
      541 gcgggggcgt tcatccacgc cacgaacgcc gcggacgccg aagcggaaaa gcgccggctc
      601 gtctgttacg actgcggcat cgcctgcgac ctcggcaaga tgcggagcga gcggctcgtc
      661 tacctgcgta agctcggcgc ccacgagcgc ccggcggagc ctgccgtcga aatcgcggca
      721 gagggcgagc cggacgcgcc gtcgccgaag ccgcgcccac gcagggcgcg ccccgaaacg
      781 ttccgtcccg cgcgcccggg cggcgtgccg caacgtttcc gcctgcgctt cgagaaggtc
      841 gggccggccg cgctgctcgg gcacctcgat ctgggccgcg agctcccgcg cgccatccgt
      901 cgcgccggcg tgcgactccg ttacagcgaa ggctttcatc ccaagcccga tctgtcgttc
      961 ggtcccgcgc tctcgctcgg catcgcgagc ctcgacgagt acgtcgacgc gaagctcatc
     1021 gacgccccgg cgatggacga gctcgtgacg cggctcgaag ccgcgacttc gggcggcttg
     1081 cgcttcgtgg cggcaaagcc gctcgtcgcg gaagatcccg ccgtctcgag tatcgtcacg
     1141 ggtgctcgct acgtgatcgc cctagccgag gacgtcgtgc gcgagcacgg cgggcgcgcg
     1201 ggactcgaag agcgcatgca ggcgctcctc gcgcgctcgg aagcgaaact tcggcgtgac
     1261 gtgggcggcg tcggaaagat cgtcgacgtg cgtcgtttcg tggtggagct cgcgcttggt
     1321 ggcgaagcgg ccgaacggga gctcgccctg ggtggcatcg tcgggcgtgt cgtgccgctc
     1381 gtcgcgacgc tcgtgatcag cccgaccggg tcggccaagg tgagcgaggt cgtggaggcg
     1441 ctcttcgggc aagcgctgcc gcacctcgcc gtgcgcgccg cgctgttcgc gggtgcgggc
     1501 acgccgttcg atctcgagct gttccggaag aagccgcgcg aggtcgttgc gagcgcgagc
     1561 gttaccgcgt aacggcgcgc gcggcggacg gccctttacc cgaacatttt ggcgcattcg
     1621 gcgacgactt cgttgctcgt cgcgtcgccg ccgtacaccg tccacttttc ggcgagggcc
     1681 gaaatggtgc acatgcgagc gtgcaggtgc ggttgcacgc cccagagaat cacggtggtg
     1741 cccgccggca gctcatcggc gagcgccgcg agcgtgaggg gccgtacgcc cgggtgtttg
     1801 ccgtcgagca cgatcacggc acgtttgcct tcgagctccg cgagccgcat cacgagctgc
     1861 tttgcgcccg cggtctcttc gacggcggcg cgcagatcga gccacgccgt gaacagccgc
     1921 acgagctcgg ggtcggtact cgcgagcaag accaggggcc gttgtgtcgg tccgggatcg
     1981 acggacgcgg tgccgatcac gccgagcgcc ttggcgacac cgcgcgggta gtcggccgac
     2041 atcggcagcg gcgcgccctt cgcgtgaatg ctctgctcgc gagcgacgcg tgacggcgac
     2101 ggttcggcaa cttgaacccg gcggcccgcg ggcacggtgg gcgcaatcgc ccgccgcgtc
     2161 ttttccgacc ggcgcggttc gctcgcgctc gctccgccct ccggcttcat ttcgggcgac
     2221 ggcaaggtgg agcgagcctt gcgttggttc ggaagcgaga tcgaacgggt gcgtgcgccg
     2281 ggacgcacgg tatcgtgttc ttcgcggacg gcggcctgcg gcgc
//
LOCUS       DATIML010001250         2602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1128986, whole genome shotgun sequence.
ACCESSION   DATIML010001250 DATIML010000000
VERSION     DATIML010001250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128986"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..904
                     /locus_tag="VLJ38_21570"
     CDS             <1..904
                     /locus_tag="VLJ38_21570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42191.1"
                     /translation="VACLCLLRKRKFFLAGFALTWSMLLRIFPGIFIIGIAIIIGFQL
                     LENIRKKKPKNLLDYIHPDHRRFIMGCVVCLAALVPASMIFTEGTQAYKDFYEHTLKT
                     HQRTPLTNTMGLETMLEHDWKGRMRFTRDDNLDDPFETWKADRLQRFHDMKPVFIGIN
                     AFLFLWTAWVLRRTKLLWVGLAMTTPLVMGLTNVTCYYYSFCIVVAALTLVRRQIGPP
                     LLVTSGVSQILLYAPNGYYWVDDRYNAQSYLFFAMGLVVLFVYSRPFSIARLKAWWEG
                     KPEPKDKVKLFVSEPPPREAATES"
     gene            complement(1011..1862)
                     /locus_tag="VLJ38_21575"
     CDS             complement(1011..1862)
                     /locus_tag="VLJ38_21575"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSU42192.1"
                     /translation="MPAAEAVANYHCVVGENPLFNAEEGRIYWLDIETGRLFRASHAT
                     LEHECFYQGPVTGGFTLQADGSLLLFEVDRIARLDRNGERRVLVEGIDADMQRFNDVI
                     ADPEGRVFAGTLGRSDVSGGLYRIERDGRVSCLFKQTGIANGMGFTRDARHFYWTCST
                     TRRIFRFDYERETGALSNRVLFHQATEPNDTPDGLTLDAEDRVFSARWGGFCVLRLDA
                     TGSVAERLPLPVERVSSVAFGGPAFDTLYVTTAAGAPGGTGDDGTLYRIQTSARGRPE
                     HRSRVLI"
     gene            complement(1882..2547)
                     /locus_tag="VLJ38_21580"
     CDS             complement(1882..2547)
                     /locus_tag="VLJ38_21580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42193.1"
                     /translation="MKLSLASAFPFLEAAASYVRRHPEELLRVARNAIGLRFGVPIVA
                     LRFLAASLGGKKAPQDVEIAAVPPGVRVSATLDLMGTTVRASAVVIVEKLKLDAETLR
                     VELRLREVLLKALDDRQETPIAALLKSGALDLSKPGNLAAYMPKRPPMLVEARDDRIV
                     LDLMKHPKLARDVRLKRALQALAPLVTVSAIESGPEHLDVALRALPEGIGEVVAGFRR
                     ALS"
BASE COUNT          453 a          864 c          843 g          442 t
ORIGIN      
        1 ggtcgcgtgc ctgtgcttgc tccgcaagcg caagttcttc ctagccgggt tcgcgctcac
       61 ctggtcgatg ctgctccgca tcttccccgg catcttcatc atcggcatcg cgatcatcat
      121 tggcttccag ttgctcgaga acatccggaa gaagaagccg aaaaacctcc tcgactacat
      181 ccaccccgat caccggcgct tcatcatggg gtgcgtcgtg tgcctcgccg cgctcgtacc
      241 ggcgagcatg atcttcacgg agggcacgca ggcctacaag gacttctacg agcacacgct
      301 gaagacgcac cagcgcacgc cgctcacgaa cacgatgggc ctcgagacga tgctcgaaca
      361 cgactggaag ggtcgtatgc gcttcacgcg cgacgataac ctcgacgacc cgttcgagac
      421 gtggaaggcg gatcggctgc agcgcttcca cgacatgaag ccagtcttca tcggcatcaa
      481 cgcgttcctc ttcctctgga cagcgtgggt actgcggcgc acgaagctcc tctgggtcgg
      541 gctcgccatg accacgccgc tcgtgatggg cctcacgaac gtcacctgtt actactactc
      601 gttctgcatc gtggtcgcgg cgctcacgct cgtgcgccgg caaatcggcc caccgttgct
      661 cgtgacgagc ggcgtgagcc aaatcctgct ctacgcgccg aacggctatt actgggtcga
      721 cgaccgctac aacgcccagt cgtacctgtt cttcgcgatg ggcttggtcg tgctcttcgt
      781 ctactcgcgg ccgttcagca tcgcgcggct caaggcgtgg tgggaaggca agcccgagcc
      841 gaaggacaag gtgaagctct tcgtgtcgga gccgccaccg cgcgaggccg caaccgaatc
      901 ctgacgcctg ccgagtcgtt cacggccgct cgcgagggcg gccgtcgacg tgcgccgcgg
      961 acgctgagat cacgtcaccg catccgcgtc gcgcgctgca gcggctgagc tcagatgagc
     1021 acgcgcgagc ggtgttcagg gcggccgcgg gcgctcgttt ggatccggta gagcgtgccg
     1081 tcgtcgccgg tccctccggg cgcgcctgcg gcggtcgtga cgtacagcgt gtcgaatgcg
     1141 ggaccgccga aggcgaccga cgacacgcgt tcgacgggta acggcagccg ttcggcgacg
     1201 ctcccggtcg cgtcgaggcg gagcacgcaa aagccgcccc agcgcgcact gaaaacgcga
     1261 tcttcggcgt cgagcgtcag gccgtcgggc gtgtcgttcg gctccgtcgc ttggtgaaag
     1321 agcacgcgat tggagagcgc tccggtttcg cgctcgtaat cgaagcggaa gatccggcgc
     1381 gtcgtgctgc acgtccagta aaagtgccgc gcgtcgcgcg tgaagcccat gccgttcgca
     1441 atgcccgtct gcttgaacaa gcagctgacg cgcccgtcgc gctcgatgcg ataaagaccg
     1501 ccactcacgt cgctccgccc gagcgtccca gcgaacactc gaccctcggg atcggcgatc
     1561 acgtcgttga accgctgcat gtcagcgtcg atgccctcga cgagcacacg acgctcaccg
     1621 tttctgtcga gccgagcgat gcggtcgacc tcgaataaga gcagcgaacc atcggcctgc
     1681 agcgtgaagc cgcccgtgac ggggccctgg tagaagcact cgtgctcgag cgtcgcgtgg
     1741 ctggcgcgga agaggcggcc cgtctcgata tccagccagt agatgcggcc ctcctcggca
     1801 ttgaacagcg ggttctcgcc gacgacgcag tgatagttgg cgacggcttc tgcagcgggc
     1861 atgtccgttc ccgagcgacg ttcaagacag cgcgcggcgg aacccggcga cgacttcacc
     1921 gatgccctcc ggcagggcac ggagcgctac gtcgagatgc tcgggccccg actcgatagc
     1981 cgacaccgtg acgagcggcg cgagcgcctg caaggcgcgc ttgagccgga cgtcgcgggc
     2041 aagcttcgga tgtttcatga gatcgagaac gatgcgatcg tcgcgtgctt cgaccagcat
     2101 gggcggacgc ttcggcatgt acgcggccag attgcccggc ttactgagat cgagcgcccc
     2161 tgacttgagc agcgccgcga tgggtgtttc ctgccggtcg tcgagcgcct tgagcagcac
     2221 ttcgcgcagg cggagctcga ctcggagcgt ttcggcgtcg agcttgagct tttcgacgat
     2281 cacgacagcc gacgcgcgca ccgtcgtgcc catcaaatcg agcgtggccg aaacgcgcac
     2341 gccgggcggc acggccgcga tctccacgtc ttgcggggct tttttgccgc cgaggctcgc
     2401 ggcgaggaac cggagcgcca cgatgggtac gccgaaacgc aagccgatcg cgttccgggc
     2461 cactcgcaag agctcctcgg ggtgacgccg gacgtagctt gcggccgctt cgaggaacgg
     2521 gaaggccgag gcaagactta gtttcacgga gcggcagcaa accacagctc gtggactttg
     2581 gcgacctgca cccgagaccg ct
//
LOCUS       DATIML010001251         3297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4011573, whole genome shotgun sequence.
ACCESSION   DATIML010001251 DATIML010000000
VERSION     DATIML010001251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3297
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4011573"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1062
                     /locus_tag="VLJ38_21585"
     CDS             <1..1062
                     /locus_tag="VLJ38_21585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HSU42194.1"
                     /translation="ELGLASAANAPRELLALVEAVRHATALPRLQAPLLGLPPAALRG
                     VPARKREQLGALLGVAAPLAAYARRVVDVGAGSGHLARLSAELFERETLAIERDPSRL
                     RTANLRSRQRAENVGPLDVRFAQADVGPEQLELRATDLAVGLHACGSLGDRLVLAAAA
                     ARCDLLLCSCCFQKIETRQRASLSRAAGIPALRKSDLGLANLTSQANGIERSLADNLR
                     GREVRLALRRLLQARGLDVAPGEEMRGVNRRRAQAGLTELATRVLSHRELTPPTPSEL
                     AVHAERAEREHAAIRRLSLPRNLLARLVEVFIVLDRAALLEESGACVLVAELFDRRVT
                     PRNTALLATAEPQRLPLSE"
     gene            1115..2773
                     /locus_tag="VLJ38_21590"
     CDS             1115..2773
                     /locus_tag="VLJ38_21590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42195.1"
                     /translation="MQRGILASGRTRGVFAGLVLALLLMACEPRRAPPAQDARAAGAT
                     ASAAPNAVTSPAPAPDGGAPPNPLAQACTPHIPATPGQGYPTWTTSCVMPALPAGYPR
                     PRPPSDRPWQQGKAASGPLSPKDPANIAKLLAALKAYVAPAFNRYLTDPTNAATRPDA
                     AGWRKMPWLGDADCDVDWSGSDASAGTSTGQLIPAGTLPGQRTDAGGTLQNHSITWYD
                     PWASFALSSVFGEPAPGVGDPTKEQMVDGSVLVKIAVLTPYADGTDWPTLAAAPVWPV
                     YRPPVGANTDYCASQTNFELLKTHVIQFDIILKSSYYAPKTEWVFATWLYDPNAKGSE
                     PLDHFTALGAMWGNDPEIPQKDFCTPTKPLQENWINPGTPAYGYQQLGWGCRLSGPID
                     IARRPVQFANGSSCPTARVSACLSCHGTSEFSKTSASTATLYPLTKGYDPFVVAEPGS
                     KDWWNWFQSRPPTTPQGDQSGQNRKDYIAFDYDMVFVTSVPISRAAAGDKALEAEAKR
                     VNDDLRLERRVLPLTKLAAVPPGSAAPPAPPPGCNCSCAPGGKR"
     gene            2925..>3297
                     /locus_tag="VLJ38_21595"
     CDS             2925..>3297
                     /locus_tag="VLJ38_21595"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU42196.1"
                     /translation="MGAELPETEPSSTAASPLSALREIGKFRLIRKLGAGGMGVVHEA
                     EDLELGVRVALKTLHTTNPQTLYRFKQEFRALAEIVHPRLVRLFELVSEEGIWFFTME
                     FVDDGVNLLEWLEQPSARAVSA"
BASE COUNT          537 a         1126 c         1104 g          530 t
ORIGIN      
        1 gagctcggat tggcatccgc agcgaacgcg ccgcgcgagc tcttggcgct ggtggaggcg
       61 gttcggcatg ccacggcgct gccgcggctg caggctccgc tcttgggtct cccgcccgcg
      121 gcgctgcgcg gagtgccggc gcgcaagcga gagcagctcg gagcgctgct cggcgtggcg
      181 gcgcctctcg ctgcgtacgc tcggcgagtc gtcgatgtcg gtgcgggcag cggccatttg
      241 gcgcgtcttt ccgccgagct cttcgagcgc gagaccttgg ccatcgagcg agatccctcg
      301 cggctccgca cggccaacct acgtagccgg cagcgcgccg agaacgtggg gccgctcgac
      361 gttcggtttg cccaggccga tgttggaccc gagcagctcg agcttcgggc gacggatctg
      421 gccgtcgggc tgcacgcgtg cggcagtctc ggtgatcgac tggtgctcgc cgccgccgcg
      481 gcccgctgcg atctcctgct ttgctcctgt tgttttcaga agatcgagac gcgacaacgc
      541 gcgagtctct cgcgagcggc ggggatccct gccttgcgga agtccgacct tggtctcgcc
      601 aacctgacct cgcaagctaa cggcatcgaa aggagtctcg ccgacaatct gcgtgggcgc
      661 gaggtgaggc tcgcgctacg tcggctgttg caagcgcgcg gactcgacgt ggcgcctggc
      721 gaagagatgc gcggcgtgaa tcggcgccgc gcccaggcgg gcctgaccga gctcgcgacg
      781 agagtgctct cgcaccggga gctgacgcca ccgacgccca gcgagctcgc cgttcacgcc
      841 gagcgcgccg agcgcgagca tgcagccatc cggcgtctct cgttgccgcg aaatctgctg
      901 gcacgtctcg tcgaagtctt catcgtgctc gaccgcgccg cactgctgga agagagcggc
      961 gcgtgcgtgc tggtcgccga gctgttcgac aggcgcgtga cgccccgcaa caccgcgctg
     1021 ctggcgacgg cagagccgca acggctgccg ctctccgagt gagggagcac ggagcgctgg
     1081 acgcggcccg gtgtaatcga gtaccgatcg cggcatgcag cgcgggattc tggcttcggg
     1141 gcgcacgcgt ggcgtgttcg cgggtttggt gctggctctt ttgctcatgg cgtgcgagcc
     1201 caggcgggcg ccgccggctc aagacgctcg cgcggcaggg gcgacagcga gcgcagcgcc
     1261 gaatgccgtc acgtcgcctg ctcccgcacc ggacggcggc gctccaccga acccgctcgc
     1321 acaggcctgt accccgcaca ttcccgcgac gcccggccag ggctacccga cgtggaccac
     1381 gagctgcgtc atgcccgcgc ttccagcggg ttatccgcga ccgcgaccgc cgagtgaccg
     1441 cccctggcag caaggcaagg cagcgagcgg ccctttatcg ccgaaggatc cggccaacat
     1501 cgccaagctg ctggcggcgc taaaagcgta cgtcgcaccc gccttcaatc gctacctcac
     1561 cgatccgacg aacgctgcga cgcgcccgga cgcagcgggc tggcgcaaga tgccttggct
     1621 gggggatgcc gattgtgacg tcgattggag cggctccgac gccagcgcag ggacgagcac
     1681 gggccaacta atccctgccg gaacactgcc ggggcagcgc accgacgcgg gcgggacact
     1741 ccagaaccac agcatcacgt ggtacgatcc ttgggcgtcc ttcgcgcttt cctcggtgtt
     1801 cggcgagccc gcgccgggag tcggcgatcc gaccaaagag cagatggtgg acggctccgt
     1861 gctcgtgaag atcgctgtgc tcacgcccta cgccgacggc acggattggc cgaccctcgc
     1921 cgcggcgccc gtctggcccg tgtatcgacc gcccgtcggc gcgaacaccg actattgcgc
     1981 ttcgcaaacg aacttcgagc tcctgaagac gcacgtcatt caattcgata tcatcctgaa
     2041 atcctcgtat tacgcgccta aaaccgagtg ggtattcgcg acatggctct acgatccgaa
     2101 cgcgaagggc tccgagccgc tcgatcactt cacggcgctc ggcgcaatgt ggggcaacga
     2161 tcccgagatc ccgcaaaagg acttctgcac gcccacgaag cccctccaag agaactggat
     2221 caatcccggt acgcccgctt acggctatca acagctcggt tggggttgtc gcttgtccgg
     2281 acctatcgat attgcgcgcc ggccggtcca gttcgcgaac ggaagtagct gtcctacggc
     2341 gcgtgtgtcg gcgtgcctga gctgccacgg gacttcggag ttttcgaaga cgagcgccag
     2401 cacggcgacg ctttacccgt tgaccaaagg ctacgacccg ttcgtcgttg ccgagcccgg
     2461 ctcgaaggat tggtggaatt ggtttcaatc gcgcccgccg accacgccgc agggcgatca
     2521 gagcggccag aatcgaaagg actacatcgc cttcgactac gacatggtgt tcgtcacgtc
     2581 ggtgccgatt tcgcgcgccg cggccggcga caaggcgctc gaagccgagg ccaagcgcgt
     2641 gaacgacgac ctcaggctcg agcggcgagt gctgccgctc acgaagctcg ccgcggtgcc
     2701 gcccggttcc gctgcgccgc cggctccgcc tcccgggtgt aactgcagtt gtgcgccggg
     2761 cgggaaacgc tgaggcgcgc cccaccgccc gcctccccac gtaagaaact ttcgacgaag
     2821 cgccgcgttc gacgaggcgc cgcgctcggc gaggccccgc gcttgacatg cctgtttcgg
     2881 aagcctaccg atgtacgatt aggcacgaga ggaccgactg agcggtgggc gcagaactcc
     2941 ccgagaccga accctcgagc acggcggcct cgccactctc ggcgctgcgc gaaatcggta
     3001 aattccggct catccgcaag ctcggcgcgg gcgggatggg cgtcgtgcac gaagcagagg
     3061 atctcgagct cggcgtgcgc gtcgcgctga agacgctgca cacgacgaac ccgcagacgc
     3121 tctaccgctt caaacaagaa ttccgggcgc tcgccgaaat cgtccacccg cggctcgtgc
     3181 ggctcttcga gctcgtgtcc gaagagggca tttggttctt cacgatggag ttcgtggacg
     3241 acggggtcaa cttgctcgag tggttggagc agccgtccgc gcgtgcagtg agcgcga
//
LOCUS       DATIML010001252         9723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2862591, whole genome shotgun sequence.
ACCESSION   DATIML010001252 DATIML010000000
VERSION     DATIML010001252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 9723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9723
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2862591"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VLJ38_21600"
     CDS             complement(<1..251)
                     /locus_tag="VLJ38_21600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42197.1"
                     /translation="MPWHGNVEPSASYQQRELSQQVRTVPQRSPPMSAATHCVSIELL
                     DPPLDEVPPVENEPPLEVDPPLDEVPPVENEPLEPPTED"
     gene            complement(480..1100)
                     /locus_tag="VLJ38_21605"
     CDS             complement(480..1100)
                     /locus_tag="VLJ38_21605"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiC family protein"
                     /protein_id="HSU42198.1"
                     /translation="MLVGALFAGACAHSPDPVFYVLAPRPGAALTTRRLVVELRRPSL
                     PGYLDRQHIVRRASAERLDLGGDERWGAPLQDLVGTTLADDLSARLPGSAVFVEPGAI
                     SAPADFRVEIEISRFELAERGAVELDAKVAVRSHVTERSEEVRRYEFASTPESRDTAS
                     LVASMSEVLARLADAIAQTLMQSSSGNDSGNAAVRAVPDGAAEPRP"
     gene            complement(1154..2866)
                     /locus_tag="VLJ38_21610"
     CDS             complement(1154..2866)
                     /locus_tag="VLJ38_21610"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSU42199.1"
                     /translation="MTGPNSPVSEREGRGLPQAHVRHHFGFSWIWLLPLGALGLVGYL
                     VYSLVARRGPAISITFDTAEGLTAGETPVKYKAVTLGVVEQIELTDDLAHVRAKVRMN
                     AQASSLLTEHARFWVVRPRLSGGFAALQSGLETLVSGAYVAVDPGPKGGKRQTKFTGL
                     EKPPSTRSDEPGTVYFLTSDTLGGLGEGAPLYYRDVPAGEVLNYELDADTHTFSLRIF
                     VRAPYDRHVLAGTRFWNSSGIRVDSGPQGLHVELQSIKSLLSGGIAFEDPPQTSGPAS
                     KPESTFRLYPSRAQAELGLYGPGLACVSYLQSSTNGLGPGSAVTLFGERIGSVTSVGL
                     VRDRRAEHQGELTARVAYVLEPGRALGETDRAALTSDGIRALGHAGLRVVLESSSFLT
                     GEKELALEYVPGAPAATLATEGETLVLPAESHDFQGLSAALGGIAAKINAIPFESIGE
                     HVDHALASLDRSVSGPELPRAMAALEDALKQTAELAREAKADLGPALARLPAISAKLE
                     RAADKAQAAFGEEGYGSDSTTQRNLERMLDQIGDAARSVRLLADYLNRHPEALVSGRR
                     ENEP"
     gene            complement(2863..3990)
                     /locus_tag="VLJ38_21615"
     CDS             complement(2863..3990)
                     /locus_tag="VLJ38_21615"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HSU42200.1"
                     /translation="MLCGVCAGLGLVLFVLALFFPLAAVWMSGGRFATSDLWMGPEHL
                     RAAGAWVLALAVFSTLLVLPFAKLVLVLSMSIGVFVGATPRWLRVGFTFVPLASQWAM
                     LDVFLLGAMIALFRLEAWMLVTFGPALFALGGAALCSIGVDAAFDEAAFWERVKVRAH
                     VSAPSADAGVIGCRHCGLVARSHEGERCARCERTLRRRKPDSVQRTWALVGAAALLAI
                     PANVLPVMTIVKLGRGGPSTILGGTVELAQAGLWGLAAIVFIASILVPLVKLTGLSVL
                     LVTTQRSSSARLPLRTRLFRLIALIGRWSMVDVFATMMLVTLARFGWLGRVLPDAGAS
                     AFCAVVVLTMFASESFDPRLMWDAAGRNQPSLAVTNEGALP"
     gene            complement(4225..5115)
                     /gene="bla"
                     /locus_tag="VLJ38_21620"
     CDS             complement(4225..5115)
                     /gene="bla"
                     /locus_tag="VLJ38_21620"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF033103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class A beta-lactamase"
                     /protein_id="HSU42201.1"
                     /translation="MPQAELSRRRFVLATASACASACGLFDVPTTGPSANVQQEIARV
                     EGRLGGRVGVYAAAFGGSSAVEYRADERFALCSTFKWVLVAQVLSHVDRGELRLDQRL
                     PLTPADLLEYAPVTRAHVAEGSMTLEALSQAAIVQSDNTAGNLLLKLVGGPSGFTDFV
                     RSLGDSTTRLDRFEPALNGNEQGDPRDTTSPRAMVGLLHALLFGDALTDASGARLLGW
                     LNACETGKARIRAAFPASWVVGDKTGTGAHGACNDVAVARPPRRASILMAIYTSGGPA
                     PIPDKEAAIAEVARIATRPL"
     gene            complement(5181..7085)
                     /locus_tag="VLJ38_21625"
     CDS             complement(5181..7085)
                     /locus_tag="VLJ38_21625"
                     /inference="COORDINATES: protein motif:HMM:NF013510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSU42202.1"
                     /translation="MSCLRHTALTVAGLLALGCARERSAPALSVEKPKKAATQATALV
                     FDGHTRGWDSGQRYTYRVALSTHVSFDGKSTNFDFDLAGNVDIVPTSVSPELVALYLA
                     FTDANVVNRVGSTGGDLDRWQNELRRTGAFVSLNGGRANALDIPPGLSEMTMSTYRQL
                     GAALQFTRAEGGAQSYTAEEYDSTGRYLAEYQRAPDGSTWLKRKRSYLSLLGAHALPD
                     GAGLDLTPQIFASSGEVRLSAAGRPEHVKLSDEFGMKGATSPLRSRVSLELTASGTRP
                     QPATDFAPLLAQTRRIAASEPLSAGTPKQVLDDARIGKLDFETIVAALEQGERARSAQ
                     PEASADPTTLRNPGPTSETEVQAQSQRFLALAAIFRKDPRAIPKAVAKIRAKSPATGD
                     LLDTLSSAGTLEAQQALVDLLGTKGIDKNFKARLVFSLARAQKPTRQASQALEAVLRD
                     DPFNAGALYGLGTHCRLYRDAGQTAQAREIGELLRARMPAARTAGERPTLLRAIANSG
                     YDGALPEVTRELADKSEEVRVAALRALQSMRDPRVDGLLTHYLLDDASDKARLSAIEA
                     IALRDPTPQTISALTQAATHDSEPHVRYRSVELLIRWLPQRPEVRPVLEQIAQKDDEP
                     KVRERAHAVL"
     gene            complement(7096..9453)
                     /locus_tag="VLJ38_21630"
     CDS             complement(7096..9453)
                     /locus_tag="VLJ38_21630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42203.1"
                     /translation="MADVDNTSDLGPALFDPASLFDGGLPVVTPAPTYSDPPTHGALP
                     KDHAWCFMDPQQTVPDAKAPKDPKHGSGGGSSRISFSFDPNLVFDANVNPLSLGESDL
                     KVHAAASLTTSVTLNNFIGQTITKDVIKAVADLSAERCTVSNDQTQFTVFGLDFVDLI
                     GVEKFNTSKPDSDWYDATTKCNKAVGTFVETANRAKKAFRDVQQLMTQFKVVKGLGGD
                     LKDLCSSVMAAVGQTGVDVPFFPGGFDCPPNEPTEITINRFLDYYQAPGYGAISQLRD
                     AVKKLSEATQVLRDGWTKTIPFGPEPRGESKTIVEAQFQIGPVPVVLEIDVFYAYGAA
                     GFFQIGLHFPFDPFSQTPVQRQDVADVRAGVMPFATAGLSAFVGAGRSLGPFSATLGL
                     EGSVTLGDVKAPLFGGAGIGMETKMDDRPPASDINDLAQATLSAVGLDNFTHFGRPKS
                     VKFFVWYDYGASLELRNILAGEIKGRLRIKFAFFSRTWRKRIVKFNGFSKTFALLSGK
                     VGADPAVATDTKGIDYKDKSGNPAGASTLVVEGTNDVGMSEAQVPLLVLSPMAVPDQE
                     PVPNAADTTFKMDDVQGMFYDSLCCAKPTDPTVAGQAQCTLPGGRAERGGPVPCCPGF
                     RCAPDPDNGSRCVFDCRTTGQTCVSTDQCCAIDNHQVSCGDDGQCQKCGNASKDPSAG
                     APCGQASDCCDFDAPNSLVTCNQNHCVLQCRPDGGFCESVDDCCVPDLKQASCVAQAC
                     HTCSVVAEISTDPHGGPCQTRNDCCGADQDDSIGCFGGVCEHGIQ"
BASE COUNT         1598 a         3268 c         3290 g         1567 t
ORIGIN      
        1 tcgtcctcgg tgggcggctc gagcggctcg ttctcgacag gcggtacttc gtcgagcggt
       61 gggtcgacct cgagcggtgg ctcgttctcg acgggcggca cttcgtcgag cggtgggtcg
      121 agtagctcga tcgagacgca gtgcgtagca gccgacatcg gcggcgaccg ctgcggcacc
      181 gtgcgcacct gctgcgacag ctcgcgctgc tggtacgacg ccgacggctc gacgttcccg
      241 tgccacggca ccgattgcta cgacgccgcg tccgacgtcg ccaagttctg ccagccctcg
      301 tcttcgccgt cttcctcgtc ctccagcgac gaggacgaaa gctcgggctg cagcctgagc
      361 gcgggtagcg cgccagggag ccagagtctc tggctggcgc tcggaacagc ggtttctctc
      421 gcgtggcggc gacggcgccg tgcctgagcc gcgcgggcgc gccctttgag aaccggcctt
      481 cacggccgtg gctccgctgc cccatccggc accgcgcgaa ccgccgcgtt cccggagtcg
      541 ttgccggacg acgactgcat gagcgtctgt gcgatggcgt cggcgagccg cgcgagcact
      601 tcgctcatgc tcgcgacgag cgacgccgtg tcccgactct cgggtgtcga cgcgaattcg
      661 taccggcgca cctcctcgga tcgttccgtg acgtgcgagc gcacggcaac cttggcgtcg
      721 agctccacgg cgccgcgttc ggcgagctcg aagcgggaga tttcgatttc gacgcggaaa
      781 tcggcgggcg ccgagatggc gcccggctcg acgaagacgg cagagcccgg aaggcgcgcc
      841 gagagatcgt cggccagcgt cgtcccgacg aggtcctgca agggtgcgcc ccagcgctcg
      901 tcgcctccga gatcgagccg ctcggcgctc gcgcgtcgca cgatatgctg ccgatcgaga
      961 tacccgggca ggctcggccg ccgtaactcg acgacgagcc gccgagtcgt cagagcggcg
     1021 ccgggacgcg gcgcgagcac gtaaaaaacg ggatcgggcg aatgcgcgca agcgccggcg
     1081 aacagcgccc cgacgagcac gcctcgtgcg agccttctgt ttggtcttct tcgtccgagc
     1141 aacgcgccgc cgctcatggc tcgttttctc gccttccgct cacgagcgct tccgggtggc
     1201 gattcaggta gtcggcgagc aagcggacgc tgcgcgcggc gtctccgatc tgatcgagca
     1261 tgcgctcgag gttgcgctgc gtcgtggaat ccgagccgta gccctcctca ccgaaagccg
     1321 cttgcgcctt gtcggccgcg cgctcgagct tggccgaaat cgcgggcaag cgggcgaggg
     1381 ccggtcccag atccgctttc gcttcgcgtg cgagctcggc cgtctgcttg agcgcgtctt
     1441 cgagcgcggc catcgcgcgc ggcagctcgg ggccgctcac gctgcggtcg agggaggcaa
     1501 gcgcatgatc gacgtgctcg ccgatggact cgaagggaat ggcgttgatc ttcgcggcga
     1561 tgccgccgag cgcggcgctg agcccttgga aatcgtgcga ctcggcgggg aggaccagcg
     1621 tttcaccttc ggtcgcgagc gtcgctgccg gcgcgccggg gacgtattcg agtgccagct
     1681 ctttctcgcc cgtcaagaaa ctgctcgact cgagcacgac gcggagccca gcgtgcccga
     1741 gcgcgcggat accgtcgctc gtgagcgctg cgcgatcggt ttctccgagc gcgcgccctg
     1801 gttcgagcac gtaagcgacg cgcgcggtga gctcgccttg gtgctcggct cgtcgatcgc
     1861 gcacgagccc gacgctagtg accgagccaa tgcgctcgcc gaaaagcgtg accgcggagc
     1921 ccggaccgag tccgttcgtc gagctctgaa ggtaactcac gcaagcgagg ccggggccgt
     1981 agagcccgag ctcggcttga gcacgactcg gataaagccg aaacgtgctc tcgggcttgc
     2041 tcgctggacc gctcgtctgc ggtggatctt cgaacgcgat gccgcccgac agcagcgact
     2101 tgatggattg gagctcgacg tggaggccct gaggcccgct gtcgacgcga ataccggagc
     2161 tattccagaa gcgagtcccc gcgaggacgt gacggtcgta gggcgcgcgc acgaagatgc
     2221 gcagcgagaa cgtgtgagta tcggcgtcga gctcgtaatt gagcacttca cccgccggca
     2281 cgtctcgata atagagcggc gccccttcac cgagcccgcc gagcgtgtcg gaggtcagga
     2341 agtacacggt ccccggttcg tccgagcgcg tactcggcgg cttttcgagg cccgtgaact
     2401 tcgtctggcg cttgccccct ttgggccccg gatcgacggc gacgtaagcg ccggaaacca
     2461 gcgtctcgag cccgctctgc agcgctgcga agcctccgct cagtcgcggc cgcaccaccc
     2521 aaaagcgggc gtgttccgtc aagagcgacg aagcctgcgc gttcatccgc accttcgcgc
     2581 ggacgtgcgc caggtcgtcc gtcagctcga tctgctcgac gacgccgagc gtgacggctt
     2641 tgtatttcac gggcgtctcg cccgccgtga gcccttcggc cgtatcgaac gtgatcgaga
     2701 tcgccgggcc gcgccgcgcg acgagcgaat agacgagata cccgaccaag ccgagcgcgc
     2761 cgagcggcag cagccaaatc cacgaaaatc cgaagtggtg ccgcacgtgc gcttgcggca
     2821 gcccgcggcc ctcgcgctcc gagaccggcg agttcgggcc cgtcatggga gggcgccctc
     2881 gttcgtcacc gcgagcgacg gctggttccg cccggccgcg tcccacatca gcctgggatc
     2941 gaacgactcc gacgcgaaca tcgtcaacac cacgaccgcg cagaacgcgc tcgcgcccgc
     3001 gtcaggcagc acgcggccga gccaaccgaa gcgcgccagc gtcacgagca tcatcgtcgc
     3061 gaacacgtcc accatcgacc agcgcccgat gagcgcgatg agtcggaaga gccgagtacg
     3121 aagcggcagc cgcgcgctcg agctccgctg cgtggtcacg agcaagacgc tgaggcccgt
     3181 gagcttcacg agcggaacca aaatgctcgc gatgaacacg atggcagcga gcccccagag
     3241 ccccgcctgc gcgagctcga ccgtgccgcc gaggatcgtg ctcggtccgc cacggccgag
     3301 cttcacgatg gtcatgacgg gcagcacgtt cgcagggatc gcaagcaatg ccgccgcgcc
     3361 gacgagcgcc caggtcctct gaacgctgtc gggtttgcgc cgccggagcg tccgctcaca
     3421 gcgggcgcaa cgctctcctt cgtggctacg agccacgagt ccacaatgtc gacagccgat
     3481 gacgcccgcg tccgcgctcg gcgcactcac gtgagcccgc actttcaccc gctcccaaaa
     3541 tgcggcttca tcgaacgcgg cgtcgacccc gatcgagcag agcgcggctc ctccgagcgc
     3601 aaacagcgcg ggcccgaacg tcacgagcat ccacgcttcc aggcggaaga gggcgatcat
     3661 cgccccgagc aggaacacgt cgagcatcgc ccactgggac gcgagcggga cgaacgtgaa
     3721 cccgactctg agccagcgtg gcgtcgcccc cacgaagacc ccgatcgaca tgctgaggac
     3781 aagcaccaac ttcgcgaacg gaagcacgag tagtgtcgaa aacaccgcga gcgcgagcac
     3841 ccacgcgccg gcggcccgca agtgttcggg gcccatccag agatcgctcg tcgcgaagcg
     3901 cccaccgctc atccacaccg ctgcgagggg aaagaacagt gcgaggacga acaagaccag
     3961 cccgaggccc gcacaaacgc cacacagcac gaggctcgac ctcctcgcct gcctcagcgt
     4021 cgccccacag cgctcgcacg tgatctgcgc cgcgatctca accgccggca gatgctgcag
     4081 taacccgcaa tcggggcact cgccgcaggc gtccagcgct gccatctgga cccgagcaca
     4141 tgcaactgac gtacccgagc gcaccccacg gcccgtcggg ctagggcaag aaggctcgtg
     4201 gccggggcgg aatgagccgg agggttacaa ggggcgcgtc gcgatgcgcg cgacctcggc
     4261 gatcgccgct tccttgtccg ggatcggcgc cggtccgccg ctcgtataga tcgccatcaa
     4321 gatcgaggcg cgtcgcggcg gacgggcgac ggcgacgtcg ttgcacgcac cgtgcgcacc
     4381 cgtgccggtc ttgtcgccga cgacccagct tgcgggaaat gcggcgcgaa tgcgcgcttt
     4441 gcccgtttcg cacgcgttca gccagccgag caggcgcgcg ccgctcgcgt ccgtgagcgc
     4501 gtccccgaag agcagtgcgt ggaggagtcc caccatggcg cggggtgacg tggtgtcgcg
     4561 cgggtcgcct tgctcgttgc cgttgagcgc cggctcgaat cgatcgaggc gcgtcgtcga
     4621 gtcaccgagc gaacgcacga aatccgtgaa cccactcggt ccaccgacga gcttcagcag
     4681 caaattgccg gccgtgttgt cgctctgaac gatggcggct tgcgacaacg cttcgagcgt
     4741 catcgagcct tccgccacgt gggcgcgcgt gacgggggcg tactcgagca aatccgcggg
     4801 cgtcaggggg aggcgctggt cgagccggag ctcgccccga tcgacgtgcg aaagcacctg
     4861 cgcgaccaac acccatttga aggtcgaaca cagcgcgaag cgttcgtcgg cgcggtactc
     4921 gaccgcggag gagccaccga aggcggccgc gtagactccg acgcgcccgc cgaggcggcc
     4981 ctccacccgg gcgatctcct gctgcacgtt cgcgcttggc cccgtcgtcg gcacgtcgaa
     5041 caagccacaa gccgaggcgc aagcggacgc ggtcgcgagc acgaagcgtc ggcgtgaaag
     5101 ttcagcctgg ggcatgggcg ctcgtactcg agcaccggcg ccgtcacgag agcaaagtaa
     5161 ataaggccgg gagcgcggcc ctaaaggacg gcgtgcgccc gctcgcgaac cttcggttca
     5221 tcgtcttttt gtgcgatttg ttcgagcacc ggacgcacct ccggccgttg cggcagccag
     5281 cggatcagaa gctcgaccga gcgatagcgc acgtgcggct cggagtcgtg cgttgcagcc
     5341 tgcgtcaggg cggagatggt ctgcggtgtc gggtcgcgca gcgcgatggc ctcgatcgcc
     5401 gagagccgcg ccttgtccga tgcgtcgtcg agcaagtaat gcgtgagcag gccgtcgacg
     5461 cgcggatcgc gcatggactg caaggcgcgc agagcagcca cgcggacctc ctcgctcttg
     5521 tcggcgagct cgcgcgtcac ctccggcagc gccccatcgt agccggagtt tgcgatggca
     5581 cgcagcagcg tcgggcgctc gccggccgta cgcgcagccg gcatgcgcgc gcgcagtagt
     5641 tcgccgattt ctcgcgcttg cgcggtttgc ccggcgtcgc ggtagagacg acagtgcgta
     5701 ccgaggccgt agagagcgcc ggcgttgaac gggtcgtccc gcagcaccgc ctcgagcgcc
     5761 tggctcgctt ggcgcgtcgg cttctgcgct cgcgccagcg agaaaaccag ccgggctttg
     5821 aagttcttgt cgatgccctt cgtgcccaac aagtcgacga gtgcctgctg cgcctccaag
     5881 gttcccgctg agctcagcgt gtcgagcaag tcgcccgtcg ccggggactt ggctcggatt
     5941 ttggccacgg ccttcggaat cgcgcgcggg tctttgcgga agatcgccgc gagcgccaaa
     6001 aagcgctgcg actgcgcttg cacttcggtt tcgctcgtgg gccccgggtt gcgcagcgtc
     6061 gtcgggtcag ccgacgcctc aggctgggcg ctgcgcgcgc gctcgccctg ctcgagcgca
     6121 gccacgatgg tttcgaagtc gagcttgccg atgcgcgcat cgtcgaggac ttgcttcggc
     6181 gtgcctgcgc tgagcggctc gctcgcggcg atgcgccgtg tttgcgcgag gagcggcgcg
     6241 aaatcggtgg ccggttgcgg acgcgtgccg ctcgccgtga gctcgagcga gacccgggag
     6301 cgcagcggcg aagtcgcgcc cttcatgccg aactcgtcac tgagcttgac gtgctctggg
     6361 cggcccgcgg ctgaaagccg aacctcgccg ctcgacgcga agatttgcgg agtgaggtcg
     6421 agccccgcgc cgtcaggcaa ggcgtgcgcg ccgagcaggc tcaggtagct ccgcttgcgt
     6481 ttcagccaag tgctgccgtc gggcgcacgc tggtattcgg cgaggtacct gccggtcgag
     6541 tcgtactctt ccgccgtgta gctctgcgcc ccgccttcgg cgcgcgtaaa ctgcaaagcc
     6601 gcgccgagct gacggtacgt actcatcgtc atttcggaga gcccgggagg gatgtcgagc
     6661 gcgtttgccc ggccgccgtt caggctgacg aacgcgcccg tacggcggag ctcgttctgc
     6721 cagcgatcga ggtcgccgcc ggtgctcccg acccgattga cgacgttcgc gtcggtgaag
     6781 gcgagataaa gcgcgactag ctcggggctg acgctcgtcg ggacgatatc gacattgccg
     6841 gcaagatcga aatcgaagtt cgtgctctta ccgtcgaacg agacgtgcgt ggaaagcgcg
     6901 acccgatacg tgtagcgctg gccggagtcc cagccgcgcg tgtggccgtc gaacacgaga
     6961 gcggtcgctt gcgtcgcggc cttttttggc ttttcgacac tgagcgccgg cgccgatcgc
     7021 tcgcgcgcgc atccgagcgc gagcaggccg gcgacggtga gggcggtatg tctcaggcag
     7081 ctcattggca cgtcctcact gaatgccgtg ctcgcacacg ccaccaaagc acccaattga
     7141 gtcgtcctgg tccgctccgc agcagtcatt gcgtgtctgg cacggccccc cgtgcgggtc
     7201 cgtcgagatt tcagccacga ccgagcaagt atggcaggct tgcgccacgc aggacgcctg
     7261 cttcaggtcg ggaacgcaac aatcgtccac gctttcgcag aacccgccat ccgggcggca
     7321 ctgcaacacg cagtggtttt ggttgcaggt gacgagcgag ttcggagcat cgaagtcgca
     7381 gcaatcgctg gcctggccgc acggcgcgcc ggcggacgga tccttgctgg cgttgccgca
     7441 cttttgacac tgtccatcgt cgccgcagct gacctggtga ttgtcgatcg cgcagcattg
     7501 atccgtcgaa acgcaggtct gtcctgtcgt tcggcagtcg aacacgcagc gtgagccgtt
     7561 gtccggatcc ggcgcgcaac ggaaacccgg gcagcacggc acgggcccac cgcgctcggc
     7621 gcgcccgccg gggagggtgc attgggcctg accggcgacc gtgggatcgg tcggcttcgc
     7681 gcagcagagg ctgtcgtaga acatgccctg cacgtcgtcc atcttgaacg tcgtgtcggc
     7741 cgcgttcggg accggctcct ggtcgggtac ggccatcggc gagagcacga gcagcgggac
     7801 ctgcgcctcg gacatgccca cgtcgttggt tccctccacc acgagcgtgc tcgcaccggc
     7861 ggggttaccg gacttgtcct tgtaatcgat gcccttggta tccgtcgcca cggcgggatc
     7921 ggcgccaacc ttgccgctca agagcgcgaa ggtcttgctg aagccgttga acttcacgat
     7981 gcgcttgcgc caggttcggc tgaagaacgc gaacttgatg cgcagccgac ccttgatttc
     8041 gccggcgagg atattcctga gctcgagcga cgcgccgtag tcgtaccaga cgaagaattt
     8101 cacggacttc ggccgcccga agtgcgtgaa attgtcgagg cccaccgccg agagcgtcgc
     8161 ctgggcgaga tcgttgatgt cggacgcggg cgggcggtcg tccatcttcg tctccatgcc
     8221 gatgccggcg ccgccgaaga gcggcgcctt cacgtcaccg agcgtcacgc tgccttcgag
     8281 gccgagcgtt gccgagaacg gcccgagact ccgcccggct cccacgaacg cggagaggcc
     8341 ggcagttgcg aacggcatga cgccggcgcg cacgtccgcg acgtcttggc gctgtactgg
     8401 agtctggctg aacggatcga acgggaagtg gagcccgatc tggaagaacc cggcggctcc
     8461 gtacgcgtag aaaacgtcga tttcgagcac gaccgggacg ggcccgatct gaaactgcgc
     8521 ttcgacgatc gtcttcgact ctccgcgcgg ctccgggccg aacgggatcg tcttcgtcca
     8581 gccgtcgcgg aggacctgcg tggcctcgct gagcttcttg accgcgtcgc gcagctgact
     8641 aatcgcgccg tagccgggcg cttgatagta atcgaggaag cggttgatcg tgatctcggt
     8701 gggctcgttc ggcgggcaat cgaagccgcc ggggaagaac ggcacgtcaa cgcccgtctg
     8761 accgacggct gccatcacgc tcgagcagag atccttcaag tcgccgccca agcccttgac
     8821 gaccttgaac tgcgtcatca gctgctggac gtcacggaaa gccttcttgg cgcgattcgc
     8881 cgtttcgacg aaggtcccga ccgccttgtt gcacttggtg gtcgcgtcgt accagtcgct
     8941 gtcaggcttg gaggtgttga acttttcgac gccgatcaga tccacgaaat cgagcccgaa
     9001 gaccgtgaac tgagtttgat cgttgctcac ggtgcagcgc tcggcgctca gatcggcgac
     9061 ggccttgatc acgtccttgg tgatggtttg accgatgaaa ttgttgagcg tgacgctggt
     9121 cgtgagcgag gccgccgcgt gcaccttcag atccgactcg ccgagcgaca acggattcac
     9181 gttggcgtcg aatacgagat tcggatcgaa gctgaagctg atgcgcgagc tcccgccacc
     9241 cgagccgtgc ttcgggtcct tgggcgcctt ggcgtccggg acggtctgct gcggatccat
     9301 gaaacaccag gcgtgatcct tcggcaacgc gccgtgcgtc ggcggatccg agtacgtcgg
     9361 cgcaggcgtc accacgggca agccgccgtc gaagagcgac gcggggtcga acagtgccgg
     9421 ccccaggtcc gaggtgttgt cgacgtcagc cacggtgaac tcctccgtgg ggttgcagat
     9481 ctcgcgctgg tcacagcgcg gcggattttc gcgcgggggg cagctcaggg ttccgcagcg
     9541 ggactgcgca cgacaaggca cagcttcggt cggtacgcaa ttcggttgct ccttgacctg
     9601 acggcagagc gcgtccgcac cgaacgatac gcagtcggcg ttttcgaagc agctgaagct
     9661 cggcggtgag accggcgtga acgtacaacc cgcgccgtcc gaaccgtcac cgacggccag
     9721 ggc
//
LOCUS       DATIML010001253         3517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2862962, whole genome shotgun sequence.
ACCESSION   DATIML010001253 DATIML010000000
VERSION     DATIML010001253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3517
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2862962"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..1326)
                     /locus_tag="VLJ38_21635"
     CDS             complement(70..1326)
                     /locus_tag="VLJ38_21635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42204.1"
                     /translation="MDPRKRVGRLGVFGIFGVFALGCSGTPEDTVGKPVSQGTSKGSG
                     GSGGTGAGMSGDKGGASSNGQGGASSHGASGGTLGVTGGSAGMLGKGGAGGVLGGVAG
                     VGGKGAGGRAASAGAAGISGSSAGGGPTVGGCSMFPADDAWNQDISAAKADASWTTHL
                     QNMVKGVKLHPDYGNDGSTLYGIPVGVVPKDQLALPVVFDWYADESDPGPYPFPSPAA
                     AIIEGGDAMNCDGDCHLLVVQQGTCQLYEGYACHYAAGWHCGNGAHWDLTKNSYGQRP
                     KGWTSADAAGLAIAPGILRYDEVRAGAVKHAIRFTTACTRQNFVAPATHEAVPSDCDP
                     NDPDSPPMGLRVRLKADYDISALSKSAQVVLTAMKQYGMILADNGSNFYFQGEANAGW
                     TDDDITPLKTVPASAFEAVAVPPLEN"
     gene            complement(1560..2075)
                     /locus_tag="VLJ38_21640"
     CDS             complement(1560..2075)
                     /locus_tag="VLJ38_21640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42205.1"
                     /translation="MNVRAAAASAAVLLFVACAGEPRAPEAALAPRGRAVEFAFGTPS
                     GELLSSQNTRGRVTALLFVATFDLTSQLMARRLDEVVRRHKPRVNAGAVALEAPNDAP
                     LVEVFKSSLELSYPVALANSVGFDHPTPFGKLDQVPTLVILDSRGHEVARAQGVVSER
                     DLDAALSAAAR"
     gene            complement(2072..2767)
                     /locus_tag="VLJ38_21645"
     CDS             complement(2072..2767)
                     /locus_tag="VLJ38_21645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42206.1"
                     /translation="MSELSSSVDRTPPAERTPLPSMPVTDERLVGAWCEWLGALATDA
                     EAALATAIAYRELTPAGRDYWLAVLQHDAKSLDVPKVALYAPLLAVESDPARRERISA
                     AMGPIELDATPGFAAHALSGVCANGTRVAVLVTPLYLNFAQVLACGYRVATGFTWVRH
                     DPIVLHSCAPNAGDGLEGALLENTPMKAIIDDLALTVLAHRRAGGELPEALSVFADLF
                     GPVIGGSTPPPAP"
     gene            complement(2919..3167)
                     /locus_tag="VLJ38_21650"
     CDS             complement(2919..3167)
                     /locus_tag="VLJ38_21650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4911 domain-containing protein"
                     /protein_id="HSU42207.1"
                     /translation="MKVTSEPPNLAPSATSDVILRHVRVAARDVVLIKGICEASEGLC
                     AMFAERGGDLVLSAPASRERELDDLVEDLRKDFNAELE"
     gene            3289..>3517
                     /locus_tag="VLJ38_21655"
     CDS             3289..>3517
                     /locus_tag="VLJ38_21655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42208.1"
                     /translation="MRHAIRAPEPPPRPLEDDERDDEERDEFGELLPGVEDEESLDDE
                     GGDEAPVVPDAFDIDPPLEDATFEEQTAPDLR"
BASE COUNT          566 a         1220 c         1201 g          530 t
ORIGIN      
        1 cgtcacaagc cgacgccaat acgcatcttc gcctacacgg cttcaccgac acggcgaagc
       61 gcccgcgcgt cagttctcga gcggcggcac cgcgacggcc tcgaacgccg aggcaggcac
      121 cgtcttcagc ggcgtgatgt cgtcgtcggt ccagccggcg ttcgcctcgc cctggaagta
      181 gaaattcgag ccgttgtccg cgaggatcat gccgtactgc ttcatggcgg tgagcacgac
      241 ctgcgcgctc ttggaaagcg cggagatgtc gtagtcggcc ttgagccgta cgcggaggcc
      301 catgggcggc gaatcgggat cgttcggatc acagtcgctc ggcacggcct cgtgcgtcgc
      361 gggcgctacg aagttttggc gtgtgcacgc ggtcgtgaat cgaatggcgt gcttgacggc
      421 gcccgcgcgc acttcgtcgt aacgcaagat gccgggagcg atcgcgagac ccgccgcgtc
      481 ggcgctcgtc caacctttcg gacgctggcc gtagctgttc ttcgtgagat cccagtgcgc
      541 gccgttgccg cagtgccagc cggcggcgta gtgacaagcg tagccttcgt aaagttggca
      601 ggtgccctgc tgcaccacga gcaggtggca gtcgccgtcg cagttcatgg cgtcgccgcc
      661 ctcgatgatc gcggccgcgg ggctcggaaa cggatacggg ccgggatcgc tctcgtcggc
      721 ataccagtcg aagacgacgg gcaacgcgag ctgatctttg ggcacgacgc cgaccggaat
      781 gccgtagagc gtgctgccgt cattgccgta gtcggggtgg agctttacgc ccttgaccat
      841 gttttgcagg tgcgtcgtcc agctggcgtc ggccttcgca gccgaaatgt cctggttcca
      901 ggcatcgtcg gccgggaaca tgctgcaacc gccgaccgtc gggccaccgc ccgcgctgct
      961 gccggaaata cccgctgcgc ctgcgctggc ggcgcgtccg ccggcgccct tgccgccaac
     1021 acccgctact ccgccgagca cgccgcccgc cccgccttta ccgagcatgc ccgcgctgcc
     1081 gcccgtgaca ccgagcgtcc ccccgctcgc gccatgactc gaggctccgc cctggccgtt
     1141 gctcgaagct ccgcccttat cgccgctcat gccggcgccg gtgccgccgc tgccgcccga
     1201 acctttcgag gtgccctgac tcacgggctt gccgaccgtg tcctcgggcg tgcccgagca
     1261 gcccagggcg aagacgccga agatgccgaa cacgccgagt cgccctactc gcttgcgcgg
     1321 atccatgaac acgggatctt agcggttcac tctgatgcgt cgaggacggc ccgagattct
     1381 ggtgcgtcga ggtgcgcggt ttcgtgcgcg cgactccgag agtgcgcggc ggaacgcatc
     1441 ggcaagcggt gcaaaacggc gacgatcccc gcgtaaaatc gagctcgcgc cggcacgaga
     1501 cgtgcgcgcg tccacgcgcc gcatcacctc gagcacgctg acgcggcgca gcgcaccgct
     1561 cagcgagccg cagcgctgag cgcggcgtcg aggtcgcgct cggacacgac gccctgagcg
     1621 cgcgcgacct cgtgcccacg cgagtcgaga atcacgagcg tcggcacctg atcgagcttg
     1681 ccgaagggcg tcggatgatc gaacccgacg gagttcgcga gcgccacggg gtaactgagc
     1741 tcgagcgacg acttgaacac ctcgacgagc ggcgcgtcgt tcggcgcttc gagcgcgacc
     1801 gcgcccgcgt tgacgcgcgg cttgtggcgg cgcacgacct cgtcgaggcg cctcgccatg
     1861 agctgcgacg tgagatcgaa cgtggcgacg aagagcagcg ccgtcacgcg accgcgcgtg
     1921 ttttgactcg agagcagctc tccgctcggc gtcccgaacg cgaactcgac cgctctgccg
     1981 cgcggcgcca gcgcggcctc gggcgcgcgc ggctcgcccg cgcaggcgac gaagagcagc
     2041 acggcggcgc tcgcggcggc cgcccgcacg ttcacggcgc gggaggcggc gtcgaaccgc
     2101 cgatgacggg tccgaacaga tcggcgaaca cgctgagcgc ttcgggtagc tcgccgcccg
     2161 ctcgacgatg ggcgagcacc gtgagcgcga ggtcgtcgat gatcgccttc atcggcgtgt
     2221 tctcgagcag tgcgccctcg agcccatcgc cggcgttcgg tgcgcacgag tggagcacga
     2281 tgggatcgtg ccgcacccac gtgaagcccg tggctacgcg gtaaccgcac gcgagcactt
     2341 gcgcgaagtt gaggtaaagc ggcgtcacga gcacggcgac gcgcgtgccg ttcgcgcaga
     2401 cgccggagag cgcgtgcgcg gcgaaacccg gcgtcgcgtc gagctcgatg ggacccatcg
     2461 ccgcgctgat gcgctcgcgg cgcgcgggat ccgattcgac ggcgagcagc ggtgcataca
     2521 gcgcgacttt gggcacgtcg aggctcttcg cgtcgtgctg gagcacggcg agccagtagt
     2581 cacgacccgc gggagtgagc tcgcgataag cgatggcggt cgcgagtgcc gcctcggcat
     2641 cggtcgccag cgcgccgagc cattcgcacc aggcgccgac gagacgctcg tccgtgaccg
     2701 gcatgctcgg cagcggggtg cgctccgcgg gcggcgtccg atccacactc gaggacagct
     2761 ccgacatgga cgggcgaacc tagggcaaga gcgcgcgact tgcaacgctt ccggtcacga
     2821 tcagcgagcg ccagcgttcc cggcgcgcct caatggattg cgcgcagagc gaactcttct
     2881 ctctcggggt cgctcggggg ctcggcaccc atgtcgtctc attcgagctc ggcgttgaag
     2941 tctttgcgga ggtcttcgac gagatcgtcg agctcacgct cgcgcgatgc gggcgcgctc
     3001 agcacgagat caccgcctcg ttccgcgaac atggcgcaca agccttcact cgcttcgcaa
     3061 atacccttga tgagcaccac gtcgcgcgcc gcgacacgca cgtgccgtaa aatcacgtcg
     3121 ctcgtggcgc tcggggcaag gttcggcggc tcggacgtga ccttcatcgt gtccacacga
     3181 tacccccaag gctcgctccg aggaaaccta cgacacgcac gggccagcgc gcggaccggc
     3241 gccctcgagc acttgacagc agagtgcgtc attggaaggt agcggctcat gcgccacgcg
     3301 atccgcgcac cagagccgcc gccgcggccc ctcgaggacg acgagcgcga cgacgaggag
     3361 cgcgacgagt tcggtgagct cttgcccggt gtcgaagacg aagagtcgct cgacgacgaa
     3421 ggtggcgacg aggcgcccgt ggtgccagac gcgttcgaca tcgatccacc gctcgaagac
     3481 gcgaccttcg aggaacagac ggcgcccgat ctgcgct
//
LOCUS       DATIML010001254         3315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5178752, whole genome shotgun sequence.
ACCESSION   DATIML010001254 DATIML010000000
VERSION     DATIML010001254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5178752"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1477
                     /locus_tag="VLJ38_21660"
     CDS             <1..1477
                     /locus_tag="VLJ38_21660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42209.1"
                     /translation="NGTGSPSAAVRAVSARVDVEDDCPASPDGSGRCAAACSTTGPQI
                     EVDWNFQNDGIDAIVLDDAPGSRVERSAICAPMLVNDATAIRVTGDGTGVLVRGNNVI
                     GRASTTENFLLRMEDCAGASPWVVQNYGIELKNSIAGAGGPDASATIRAAGDCHPVIE
                     ANRVIHGFGGSDPVTVVTCTSRGNVASRCVVTNNPDVSAGYMVSNTSDLQPGANAVAV
                     DCSFGCSRVDHNKITGIQAIPNDCGALHCSRNAVGLNLNGGSTWVSSNRILGGALGFV
                     RATGVSMADPQGRLENNVIFGTNEPPAPRGQTPVIELAHARVAVGLSSYSGDVDSNFI
                     AGSDGALTATDVLECASDGVDLSGGSFRNNIITGGRCGLSILRLGSTAAPTTFEHNAL
                     YNGAVTASEYDYLATGALLADYALAGVASGTLLFTAADVDTKLGGAASFAEPCAQTSD
                     RHLAGGSACIDAGTLAGAPQLDIDGEARDTSPDVGPDEYRP"
     gene            complement(1553..2329)
                     /locus_tag="VLJ38_21665"
     CDS             complement(1553..2329)
                     /locus_tag="VLJ38_21665"
                     /inference="COORDINATES: protein motif:HMM:NF018936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1444 family protein"
                     /protein_id="HSU42210.1"
                     /translation="MDTSNAESFTASVLELFRSTDADGSWTRKEALTLTNRTGLVVNL
                     DRLWGVCQTHVDTCPNEVAHFVKTACEIASQASAKATPSALVALVRDKSYLDALPPEV
                     RVKTIWDPLVADLIVVYALDLGASVRGIQEHDLTDAGVSRQELPKTARQNVEARLGKI
                     SGGLQCHGSDVTALKVENYLESSRLLLSDSWAALAAATKGPILAAAPATDVVLFVCKP
                     DADGLTKLTHLTDSFWHTAQRHVSRTLLKWSPQGWTELRH"
     gene            2688..>3315
                     /locus_tag="VLJ38_21670"
     CDS             2688..>3315
                     /locus_tag="VLJ38_21670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42211.1"
                     /translation="MSLFGGQSSVFCGAVLLLAVTAGCESRHAERCQAECQARGLCTE
                     RGGRCVATDAADCRRSRQCEEKGRCSLVGDDCRATAETCVTFAGCKTSGACGQKDGSC
                     APTADAHCAPTEGCRADGLCSAQGGLCVAKQGDCKAAEACTRFSRCTADEGRCATFGP
                     TDCLQGELCKKQGYCTFVRDHCELTSRADCERTEGCAALGTCSFVADTG"
BASE COUNT          559 a         1117 c         1117 g          522 t
ORIGIN      
        1 caacggtacg ggctcgccct cggcggctgt gcgcgcggtc agcgcgcgcg tcgacgtgga
       61 agacgactgc ccggcgagcc ccgacggcag cggtcgctgc gcggccgctt gctccacgac
      121 cggccctcag atcgaagtcg actggaactt ccagaacgac ggcatcgacg cgatcgtgct
      181 cgatgacgct ccgggctcac gcgtcgaacg gagcgccatc tgcgcgccca tgctcgtgaa
      241 cgatgccacg gccattcgcg tgacggggga cggcacggga gtcctcgtgc gaggcaacaa
      301 cgtgatcggg cgcgcgtcga cgacggagaa tttcctgctc cggatggagg actgcgcagg
      361 cgcctcgccg tgggtcgtgc agaactacgg catcgagctc aagaactcga ttgccggcgc
      421 cgggggaccc gacgcgtcag ctaccattcg tgcggcgggc gattgccatc cggtgatcga
      481 agcgaaccgc gtgatccacg gttttggcgg ctccgatccg gtcacggtcg tcacgtgcac
      541 gtcgcggggc aacgtcgcga gccgctgcgt cgtcaccaac aatcccgacg tgagcgctgg
      601 ctacatggta tccaacacga gcgacctcca acccggagcg aacgccgtgg ccgttgattg
      661 ctcgttcggc tgctcacgcg tggaccacaa taaaatcacg gggatccagg cgatacccaa
      721 cgactgcggc gcgctgcact gcagccgcaa cgccgtcggg ctcaacctga acggcggctc
      781 cacctgggtc tcgtcgaatc gcattctcgg cggcgcgctc ggctttgtgc gtgcgacggg
      841 cgtcagcatg gccgacccgc aggggcggct cgagaacaac gtgatcttcg gcacgaacga
      901 acctccggct ccgcgaggcc agactccggt catcgagctc gcccacgcgc gcgtggcggt
      961 cgggctctcg agctattccg gcgacgtgga ttcgaacttc atcgcgggct cggacggagc
     1021 gctgaccgcg actgacgtgc tcgagtgcgc gagtgacggc gtggacctgt ctggcggcag
     1081 cttccgcaac aacatcatca cgggcggcag gtgtggcctc tcgatcctgc gcctgggctc
     1141 gacggcggcg cccacgacgt tcgagcacaa cgcgctctac aacggcgccg tgaccgcctc
     1201 ggagtacgac tatctcgcca ccggggcgct gctcgctgac tacgccctcg ctggcgtcgc
     1261 gagcgggacc ctcttgttca cggctgccga cgtggacacg aagctcggcg gtgccgcaag
     1321 ctttgccgaa ccctgcgcgc agacgagcga ccgccacctc gcggggggct cggcgtgcat
     1381 cgacgccggc acgctggccg gcgcgcctca gctcgatatc gacggtgagg cgcgcgacac
     1441 gtcacccgac gtggggcccg acgagtaccg accgtgacgg cgcgctgaac gacgcgtttc
     1501 gctcggagcc ccaatccggc ggctcgagag cttgcgcctt cgtggccgtg cttcagtgac
     1561 ggagctcggt ccagccttgc ggcgaccatt tcagcagcgt gcgagaaacg tggcgttgtg
     1621 cggtatgcca gaagctgtcg gtcaaatgcg tgagcttggt gaggccgtca gcgtcaggct
     1681 tgcagacgaa gagaaccacg tccgtagcgg gagcggccgc gaggataggg cccttcgtag
     1741 cggccgcgag cgccgcccag gaatcggaca gcagcaagcg gctcgattcg agatagtttt
     1801 cgactttcaa cgcggtgacg tccgagccgt gacattgcag gccgccggag attttcccga
     1861 gtctggcctc gacattctga cgcgccgttt tggggagctc ctgacgactg acgcccgcgt
     1921 ccgtcaaatc gtgttcctgg attccgcgca cgcttgcgcc gagatcgagc gcatagacga
     1981 cgatgagatc agcgaccaag ggatcccaaa tcgtcttcac cctcacctcc ggcggcaacg
     2041 cgtcgagata ggatttgtcg cgaacgagag ccacgagcgc tgaaggagtc gccttggcgc
     2101 tcgcttggga cgcaatctca cacgccgttt tgacgaaatg ggcaacctcg ttcgggcacg
     2161 tgtccacgtg cgtctgacag actccccaaa ggcggtccaa attcacgacg aggcccgtgc
     2221 ggttcgtcag cgtcagcgcc tcttttcgcg tccaactccc gtccgcgtcg gtgcttcgaa
     2281 agagctccaa gacactggcc gtgaacgact ccgcgttgga agtgtccacc cccgagctcg
     2341 actgagcagc gacgccagcg gatgccgatg cgctcgtcgc caccggcgcg gccgggtgtt
     2401 cttgtcgagc gcagctagcg agagcgagcg acaccacgaa cgtaaaacgc ctcatcacag
     2461 tccgcctcgt accatgccac gcccgaaccg ggctcatcga gggtcagctc ggtacggaga
     2521 caggcgggag cggcctcgaa tacacgccta ctgccacact acgccgagcg tgagcgggga
     2581 cgtctcgagt ctggggaccg gacacatcgc cgccgagacc acgccgtacg agcttcggac
     2641 ggcagggccg ggctcactcg ccggcgccgc gtagtagtct cgcgccggtg agtctcttcg
     2701 gtggccagtc gtcggtcttc tgtggagccg tgctgctcct cgccgtcacg gccggctgcg
     2761 agagccggca cgccgagcgc tgccaagcgg agtgccaagc gcgcgggctc tgtaccgagc
     2821 gggggggccg ttgcgtcgcg acggacgccg ccgactgtcg gcgctcgcgg caatgcgagg
     2881 agaagggacg ctgctcactc gtgggcgacg actgccgggc caccgcggag acgtgcgtga
     2941 cgtttgccgg ttgcaagact tcgggggcgt gcggccaaaa ggacggctcc tgcgcgccga
     3001 ccgccgacgc ccactgcgcg ccgaccgaag gctgccgcgc ggacggcttg tgctcggcgc
     3061 agggggggct ctgcgtggcc aaacaaggcg actgcaaagc cgccgaagcc tgcacgcgct
     3121 tcagtcgctg cacggccgac gagggccgtt gcgccacctt cgggcccacc gactgtctcc
     3181 aaggcgagct ctgcaaaaag caaggctact gcaccttcgt gcgcgatcac tgcgagctca
     3241 cttcacgcgc cgattgcgag cgcaccgagg gctgcgcggc gctcggtacg tgctcgttcg
     3301 tggccgacac cggca
//
LOCUS       DATIML010001255         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2575327, whole genome shotgun sequence.
ACCESSION   DATIML010001255 DATIML010000000
VERSION     DATIML010001255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2575327"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1311)
                     /locus_tag="VLJ38_21675"
     CDS             complement(<1..1311)
                     /locus_tag="VLJ38_21675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42212.1"
                     /translation="MRHRLAFAFATALVAAAAHAAPTSAPLTSAPPPPPLLSAPPPPN
                     VAPPAGSSLVPASAASATCVEHVPLGKDRPKLTEKFPARGESGHVLTLSLTLEHGKGE
                     TVLPGGFQLQTEDPTFRGLERVGLYLPDPDGGAGPTLTRSEQGERATTHVEISFVALP
                     QKPGRNVLVVPPLPVTVARASGDVLVLCTEPHEVTIEDPIANTSNPMPRPNPAARPQR
                     EEWTTLKNALMVGAGALVLGALVAWLIGKWLRRPRPVPPPPPPRPPWEVALEELFDIR
                     HAGLIGEGRLAEHFDRVSDSLRKYLGARFGFDGLESTTREALSVLRDVAPRVEPLDAI
                     ETFLRQADLVKFAKTVPTAEDGELALVRAEHIVRETLPTIGVTAAGVPTTTLPVPVAA
                     PMPVEARPVAPVVDDEFAKWGPKPNASATQPSAPPVAEPQPNTHA"
     gene            complement(1308..>1691)
                     /locus_tag="VLJ38_21680"
     CDS             complement(1308..>1691)
                     /locus_tag="VLJ38_21680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSU42213.1"
                     /translation="TLYRVARRRSVAFVMSDFFATGYERTLSLAASRHDVIPVLLVDP
                     RDEQLPNVGLANFEDFETGDSVMVDTSSARVRAHYAHEMRRRRESTVRLFTKLGLDHC
                     VVRTDRPYIGPMRDLFARRARRAHR"
BASE COUNT          247 a          561 c          623 g          260 t
ORIGIN      
        1 cgcgtgtgtg ttcggctgcg gttcagcgac gggtggcgcg gacggctggg tcgcgctcgc
       61 gttcggcttc ggaccccact tcgcgaattc gtcgtcgacc acgggcgcga ccggtcgcgc
      121 ttcgaccggc atcggcgccg ccaccgggac gggaagcgtc gtggtcggca cgcctgccgc
      181 agtcacgcca atcgtcggca gcgtctcacg cacgatgtgt tcggcgcgca cgagcgcaag
      241 ctcgccgtcc tccgccgtcg gcaccgtctt tgcgaacttc acgagatcgg cttggcgcaa
      301 aaacgtttcg atcgcgtcga gcggctcgac gcgcggcgca acgtcgcgga gcacggagag
      361 cgcttctcgg gtcgtgcttt cgagcccatc gaagccgaaa cgcgcgccca aatacttgcg
      421 caagctgtcg gaaacgcgat cgaagtgctc ggcgaggcgg ccctcgccga tgagtcccgc
      481 gtgacgaatg tcgaagagct cctcgagcgc gacttcccac ggtgggcgcg gcggcggcgg
      541 tgggggcacg ggacgcggac gccggagcca tttcccgatc agccaggcga cgagcgcgcc
      601 gagcacgagg gcgcccgcgc cgaccatgag cgcgttcttg agcgtggtcc attcctcgcg
      661 ctgtgggcgc gccgccgggt tcggccgcgg catcggattg gacgtgttgg cgatggggtc
      721 ttcgatcgtg acttcgtgcg gctcggtgca aagcacgagc acgtcgccgc tcgctcgcgc
      781 gacggtcacg ggcagcggcg gcacgacgag cacgttgcgc cccggctttt gcggcagcgc
      841 cacgaatgaa atctcgacgt gtgtcgtcgc gcgctcgcct tgctcgctgc gcgtcagagt
      901 tgggcccgcg ccgccgtccg gatccggcag gtacaggccc acgcgttcga gtccgcggaa
      961 cgtcggatcc tccgtttgga gctgaaagcc gccgggaagc acggtttcgc ccttgccgtg
     1021 ctcgagcgtg agcgaaagcg tgagcacgtg gccgctctcg ccgcgcgcgg gaaacttctc
     1081 ggtgagcttc ggtcggtcct tgccgagcgg cacgtgttcc acgcacgtgg cgctcgctgc
     1141 ggacgccggc acaagggagg agcccgcggg cggagcgacg ttcggcggcg gcggtgcgct
     1201 gaggagcggg ggcgggggcg gtgcgctcgt cagcggcgcc gacgtgggcg ccgcgtgcgc
     1261 ggccgccgcg acgagcgccg tcgcgaacgc aaaggcaagc cggtgcctca ccggtgcgcc
     1321 ctccgcgcgc ggcgtgcgaa aagatcgcgc atcgggccga tataaggtcg atcggtgcgc
     1381 acgacgcagt gatcgaggcc gagcttcgtg aagagccgca cggtgctttc gcgacggcgc
     1441 cgcatctcgt gcgcgtagtg ggcgcgtacg cgcgcgctcg aggtgtcgac catcacgctg
     1501 tcgcccgttt cgaaatcctc gaaattggcg agcccgacgt tcggtagctg ctcgtcgcgt
     1561 ggatcgacga gcaagacggg aatcacgtcg tggcgcgacg cggcgagcga cagcgtgcgc
     1621 tcgtagcccg tcgcgaaaaa atcgctcatc acgaacgcga cgctgcgccg gcgcgccacg
     1681 cgatagagcg t
//
LOCUS       DATIML010001256         4381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1132168, whole genome shotgun sequence.
ACCESSION   DATIML010001256 DATIML010000000
VERSION     DATIML010001256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4381
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1132168"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /locus_tag="VLJ38_21685"
     CDS             <1..802
                     /locus_tag="VLJ38_21685"
                     /inference="COORDINATES: protein motif:HMM:NF014592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HSU42214.1"
                     /translation="FHAVVLGAGTWRTPTEERGRAPQLRAGERVASGELTATVVAVDA
                     AEPALVTLRFDQTGAVFERALYARGTVVQYSYLSRPLELWDVQSRFSARPWAFEPPSA
                     GLALAFELITALRARGIEVAALSHAAGLSSTGSASLDRRLPLPERYEIPETTRIAVER
                     TRAHGRRILAVGTTVVRALESSALEHGAVQAGTGEARLVIGPGFRPRVVDGLLTGMHA
                     PGTSHFSLLRAFAPRELLERALDTAARRGYLEHEFGDACLVLPRRAAP"
     gene            complement(811..1578)
                     /locus_tag="VLJ38_21690"
     CDS             complement(811..1578)
                     /locus_tag="VLJ38_21690"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF012444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HSU42215.1"
                     /translation="MSGVLAEILATKAVEVASLRGRRFPAGPPRRTVALARAPGEPLR
                     IITEIKRRSPSAGALSTRLGVAERAAAYERAGASMVSVLCDERYFDGSFEHLSAARAA
                     CSLPLLCKEFVIDEVQLDAARSHGADAVLLIVRCVEPARVAELVRAARQRELEPFVEV
                     ATEAEARIAVDAGATLVGVNARDLDTLAMDAARVARILAELPATVTSVHLSGLATPEA
                     VTAVARGPAHAALIGETLMRRDDPEPLLRDLVAAARG"
     gene            complement(1575..2642)
                     /gene="trpD"
                     /locus_tag="VLJ38_21695"
     CDS             complement(1575..2642)
                     /gene="trpD"
                     /locus_tag="VLJ38_21695"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HSU42216.1"
                     /translation="MSQDFVTREDLPSFASVLDELMRPDGLSANTVRRVFDAIFAGAW
                     TNAQIGGLLTGLRLRGDRGDVIAAAAAAMRAVMLKVPHDFPKLLDTCGTGGDGSGTLN
                     LSTGAAIIAAATGTPVAKHGNRAASSRSGSADVLEALGVPLDVPAGEQGAVLREANIA
                     FLFALAHHPAMKHAMPVRRELGVRTLFNCLGPLANPAGATHQLLGAYDDGIRRVLADA
                     LKELGTTRAWVVRSSDGMDELSPHAMTRVTELDHGSVRELEVVPEDFGFERSPAGAIR
                     GGEPDENAAALRTILGNDPHPARDAVLLNAAAALVVAHGLEPRAAAEQAREALASGAA
                     ARVLDSWRRAADARRTRPGAA"
     gene            complement(2639..3211)
                     /locus_tag="VLJ38_21700"
     CDS             complement(2639..3211)
                     /locus_tag="VLJ38_21700"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HSU42217.1"
                     /translation="MKRVVVVDNYDSFTYNLVQYVLSLGVDCDVRLNDRTTSAEIGAD
                     APAGILLSPGPGTPDDAGVTLDVIREHSGKIPILGVCLGHQSIGQAFGGTVLRAPHLM
                     HGKTSRIQHDGRTIYQGVPSPFEATRYHSLIVEEKSLPDCLEVTARAPAGEIMGLRHK
                     SLPVEGVQFHPESILTEHGLRLIENWISSL"
     gene            complement(3257..4144)
                     /locus_tag="VLJ38_21705"
     CDS             complement(3257..4144)
                     /locus_tag="VLJ38_21705"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU42218.1"
                     /translation="MQRLTLTRRDGAPLAAYLAGSSGPVLVLANGLGGPVAALRHQIA
                     YFERRFRVLTWDYRGLYESRGDTPPARVDIAAQTEDLRDLLATITDERAAIVGWSMGV
                     QVALELAWRAPERVSELVLISGAHGRPMTNLRVPLAGRLLPALIERLRPYHRLGTRVV
                     ARAVQSRVIAELVRRTHLVSPRLTADEILELAREFTALDLDVYLRTLAALELHDATPA
                     LRGLGHRTLVMAGARDPLFSPRLARRLSNELLHGELYLVPGATHYAPLEFPELVNARI
                     ERFLASSTHFDAAGAGARA"
BASE COUNT          670 a         1486 c         1566 g          659 t
ORIGIN      
        1 gtttcatgcc gtagtgctcg gcgccggaac gtggcgcacg ccgacggaag agcgcggccg
       61 agcgccgcag ctgcgcgccg gcgagcgcgt cgcgagcggt gagctcacgg caacggtcgt
      121 cgccgtcgat gcggcggagc cggcgctcgt cacgctccga ttcgatcaga cgggcgccgt
      181 gttcgagcga gcgctctatg cgcgcggtac ggtagtgcag tactcgtatt tgtctcggcc
      241 gctcgagctc tgggacgtgc agagtcggtt ttcggcccgg ccctgggcgt tcgagccgcc
      301 gtccgcgggt ctcgcgctgg cgttcgagct catcaccgcg ctccgggcac gcggcatcga
      361 agtcgcagcg ctttcgcacg cggcggggct ctcctcgacg ggctcggcgt cgctcgatcg
      421 gcgcctgccg ctgccggagc gttacgaaat ccccgagacg acgcgcatcg cggtcgagcg
      481 cacgcgagcg cacggcagac gcatcctggc ggtcgggacg acggtggtgc gcgcgctcga
      541 aagcagcgca ctcgagcacg gcgcggtgca ggcagggaca ggtgaggcga ggctcgtgat
      601 cggtcccgga ttccgtccgc gagtcgtgga cggcttgctc acgggtatgc acgcgccggg
      661 cacgagtcat ttctcgttgc tacgcgcgtt cgcgcctcgc gagctgctcg aacgcgcgct
      721 cgataccgcc gcacgccgcg gctacctcga acacgaattc ggcgacgcct gcctcgtctt
      781 gccgcgacgc gcagcgccgt gaagcgccgg ctagccccgc gcggcggcga cgaggtcgcg
      841 gagcaacggc tccggatcgt ctcgccgcat cagcgtctcg ccgatcagcg ccgcgtgcgc
      901 cggcccgcgc gcgacggccg tcacggcttc cggcgtcgcg aggcccgaaa gatgcacgct
      961 cgtcaccgtc gcgggcagct cggcgagaat gcgcgcgacg cgtgcggcat ccatcgcgag
     1021 cgtgtcgaga tcgcgcgcgt tgacgccgac gagcgtggcg cccgcgtcga cggcgatgcg
     1081 cgcttccgct tccgtcgcga cctcgacgaa cggctcgagc tcacgctgtc gagccgcgcg
     1141 gacgagctcg gcgacgcgcg caggttcgac gcagcgcacg atgaggagca cggcgtcggc
     1201 gccgtgactg cgcgccgcgt cgagctgtac ctcgtcgatc acgaactctt tgcagagcag
     1261 cggcaacgaa caggcggcac gcgccgcgct caaatgttcg aagctgccgt cgaagtagcg
     1321 ctcgtcgcag agcacgctca ccatgctcgc tccggctcgc tcgtaagcgg ccgcgcgctc
     1381 ggcgacaccg agccgcgtcg agagcgcccc cgccgacggc gagcgtcgtt tgatttcggt
     1441 gatgatccgc agcggttcgc cgggggcgcg cgcgagcgcc accgttcggc gcggcggtcc
     1501 agcggggaaa cgccgcccgc gcaggctcgc gacctcgacc gctttcgtcg cgaggatctc
     1561 ggcgagtacg ccgctcatgc tgctccggga cgcgttctcc gcgcgtcggc ggcgcggcgc
     1621 cagctgtcga gcacgcgcgc ggcggcgccg gacgcgaggg cctcacgcgc ctgctcggcg
     1681 gcggcgcgcg gctcgaggcc gtgggcgacg acgagcgccg cggcggcgtt gagcaacacg
     1741 gcgtcgcggg cagggtgcgg atcgttcccc aaaatcgtgc gcaaggccgc ggcgttttcg
     1801 tcgggctcgc cgccgcgaat ggcgcccgcg gggctccgtt cgaagccgaa gtcttcgggc
     1861 acgacctcga gctcgcgcac actcccgtgg tcgagctcgg tcacgcgcgt catggcgtgc
     1921 gggctgagct cgtccatgcc gtcgctgctg cgcacgaccc aggcgcgcgt ggtgccgagc
     1981 tccttcaggg cgtcggcgag gacgcggcga atgccgtcgt cgtaggcgcc gagcagctgg
     2041 tgcgtcgcac ccgcgggatt ggcgagcggt ccaaggcaat tgaagagcgt gcgcacgccg
     2101 agctcgcgtc ggacgggcat ggcgtgtttc atcgcggggt ggtgggcgag cgcaaagaga
     2161 aacgcgatgt tcgcctcccg cagcacggcc ccctgctcgc ccgcgggcac gtcgagcggg
     2221 acgccgaggg cttcgagcac gtcggcgctg ccggagcggc tcgaggccgc gcgattgccg
     2281 tgcttggcga cgggggtgcc ggttgcggcc gcgatgatgg ctgcgcccgt cgagaggttc
     2341 agcgtgccgg agccgtcgcc gcccgtgccg caagtatcga ggagcttcgg gaaatcgtgc
     2401 ggtaccttga gcatcactgc gcgcatggcc gctgcggcag ccgcgatcac gtcaccgcga
     2461 tcgccgcgca gacggaggcc ggtgagcagg cccccgattt gcgcgttggt ccacgcgccc
     2521 gcgaaaatcg cgtcgaagac gcgacgtacc gtattcgccg agagcccgtc ggggcgcatc
     2581 agctcgtcga gcacgctcgc gaaggacggc aggtcttctc gcgtcacgaa atcctgactc
     2641 atagcgacga tatccaattt tcgatcaagc gcagcccgtg ctcggtgagg atcgattcgg
     2701 ggtgaaactg gaccccttcc accggcaagc ttttgtggcg cagtcccatg atttcgcctg
     2761 cgggcgcgcg tgccgtcacc tcgaggcaat cgggcagact cttctcttcc acgatcagcg
     2821 aatggtagcg cgtggcctcg aacggggagg gcacaccctg gtaaatcgtg cggccgtcgt
     2881 gctggatccg tgacgtttta ccgtgcatca ggtgcggcgc gcgcagcacg gtgccgccga
     2941 aggcttggcc gatcgattgg tggccgagac acacgccgag gatcgggatt ttgccggaat
     3001 gttcgcggat cacgtccagc gtcacgcccg cgtcgtcggg ggtgccgggg ccgggtgaga
     3061 gcaggatgcc ggcaggggcg tcggcgccga tttcggcgct cgtcgtgcga tcgttcaatc
     3121 gcacgtcgca gtcgaccccg agcgacagca cgtactgcac gagattgtac gtaaaagagt
     3181 cgtagttatc gacgaccacg acgcgtttca tggcgcggag cgttgcatcg acgtgccgta
     3241 cggtcaatcg agggcctcac gcgcgggcgc ccgcccccgc cgcgtcgaag tgcgtggaag
     3301 aggcgagaaa acgctcgatg cgagcattca cgagctccgg aaattcgagc ggcgcgtagt
     3361 gtgtcgcgcc gggtacgaga tagagctcgc cgtgaagcag ctcgttcgag agccgccgcg
     3421 ccagacgcgg tgaaaacagc gggtcccgcg cacccgccat gacgagcgtc cgatgcccga
     3481 ggccgcgcag cgccggcgtc gcatcgtgaa gctcgagcgc ggcgagggtt cgcaagtaca
     3541 catcgaggtc gagcgcggta aactcccgcg caagctcgag gatctcgtcg gcggtgagac
     3601 gcgggctcac gaggtgcgtc ctccgcacga gctccgcgat gacacgcgac tgcacggcgc
     3661 gcgcgacgac gcgcgtcccc agccggtgat agggccgcag gcgttcgatg agcgcgggta
     3721 agagcctgcc cgcgagcggc acacgcaggt tcgtcatcgg ccggccgtgg gcgccgctga
     3781 tgagcacgag ctcgctcact cgttcgggag cccgccaagc aagctcgagc gccacctgca
     3841 cgcccatgct ccacccgacg atggcggccc gctcgtcggt gatcgtggcg agcaggtctc
     3901 gaagatcctc ggtttgggca gcgatatcga cgcgcgcagg cggcgtatcc ccgcgcgatt
     3961 cgtagaggcc ccggtagtcc caggtgagca cgcgaaaacg ccgctcgaaa tacgcaatct
     4021 ggtgacgcag cgccgcgacg ggtccgccga ggccgttggc aagaaccaag actggtccgc
     4081 tcgagcctgc caggtaggcg gcaagcggtg cgccatcccg tcgggtgagc gtcaatcgct
     4141 gcatggtgaa agattccgtg gctcgctcac cctgccacgc caatgcgtcg tgcgggccgc
     4201 gattgatgct tgcccgcttc aaacgctgcc gctactgtgc cgtgccccga agccaaggcc
     4261 ggtccgtccc cggcactcta attggctcgc actcaagcca tgtcggacaa caagcccaaa
     4321 atcgatctca aggcccgcct cggtaagaag acggcgggca tgcccgcaac tgcgtccgtg
     4381 c
//
LOCUS       DATIML010001257         1574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2863941, whole genome shotgun sequence.
ACCESSION   DATIML010001257 DATIML010000000
VERSION     DATIML010001257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2863941"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /gene="eno"
                     /locus_tag="VLJ38_21710"
     CDS             complement(<1..853)
                     /gene="eno"
                     /locus_tag="VLJ38_21710"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240306.1"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HSU42219.1"
                     /translation="MPEILQVSAREILDSRGNPTVEAEVQTTSGFGRAAVPSGASTGE
                     HEACELRDGDKARFMGKGVQKAVANVNDKLGPAVIGMSALDQAAIDQRLLETDGSANK
                     SKLGANAVLAISMAVARAAADVVGLPLWRYLGGAQARVLPTPLMNIVNGGAHADSGLE
                     VQEFMVVPHGLPTFAEALRAGVEVFHTLKKQLSRDGLTTSVGDEGGFAPRLASNEDAI
                     KRVMQAITDAGYEPKKQVSIALDCAASEFFRDGKYTWDKKPHTAAELADVYATLAARY
                     PIVSIEDG"
     gene            complement(917..1309)
                     /locus_tag="VLJ38_21715"
     CDS             complement(917..1309)
                     /locus_tag="VLJ38_21715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42220.1"
                     /translation="MPAPAARPSSPIQSAPTAAAASSRVYTPASVISAAPMVPVTPAN
                     TAARGPSAEPPAIGAEAPTAPGMLPTASTRSTVPALLHQAVRASVEPTNEAGVFRLKL
                     LAANEMASLSGHEALVVLLDPSASLLRE"
BASE COUNT          227 a          509 c          592 g          246 t
ORIGIN      
        1 agccgtcctc gatgctcacg atcgggtagc gagccgcgag cgtcgcgtac acgtctgcga
       61 gctcggccgc cgtgtgcggc ttcttgtccc aggtgtactt gccgtcgcgg aagaactcgc
      121 tcgccgcgca atcgagcgcg atcgacacct gcttcttcgg ctcgtaaccc gcgtcagtga
      181 tggcctgcat cacgcgcttg atcgcgtctt cgttcgaggc gaggcgcggc gcgaagccac
      241 cttcgtcccc gacggaggtc gtgaggccgt cgcgcgaaag ctgcttcttc agcgtgtgga
      301 acacctcgac gcccgcgcgc agcgcttccg cgaacgtcgg caagccgtgc ggcacgacca
      361 tgaactcttg gacttcgagg ccgctgtccg cgtgagcgcc gccgttgacg atgttcatga
      421 gcggcgtcgg caaaacgcgc gcctgcgcgc cgccgagata acgccagagc ggcagtccca
      481 ccacgtccgc tgcggcgcgc gcgaccgcca tcgagatcgc gagcacggcg ttcgcgccga
      541 gtttgctctt gttggcgctg ccgtcggtct cgagcaggcg ctggtcgatc gccgcctggt
      601 cgagcgcgct catgccgatc acggcgggcc cgagcttgtc gttgacgttg gcgacggcct
      661 tttgcacgcc cttgcccatg aagcgagcct tgtcaccgtc gcgaagctca caggcctcgt
      721 gctcgccggt ggaagccccg ctcggcacgg cagcgcggcc gaagccgctc gtcgtctgga
      781 cctctgcctc gaccgtaggg ttaccccggg aatcgaggat ttcgcgcgca ctgacttgaa
      841 ggatctcggg catgcggggc ccgataccat ggacgcgcga cgctggcgac ctcgagtgag
      901 ggctcgcgtt cggcgcttat tcgcggagca ggctcgcgct cggatcgagc aggaccacga
      961 gcgcttcgtg accggaaagt gacgccattt cgttggcggc gagcagcttc aaccgaaaca
     1021 caccggcctc attcgtgggt tccacgcttg cgcgtacggc ttggtgcagg agcgcgggaa
     1081 ccgtggagcg cgtcgaggcc gtcggaagca tgccgggcgc ggtcggcgct tcggcaccga
     1141 tcgcgggggg ctccgcggat ggcccgcgcg cggcggtgtt cgcgggagtg acgggcacca
     1201 tcggcgccgc ggaaatgacg gaggccggcg tgtagacacg cgacgaagcg gcggccgccg
     1261 tgggcgcgga ctgaatcggc gagctcgggc gtgcagcggg cgcgggcatg ggggaaacgg
     1321 gcgcagacgc gggtgcggac gcagcctgag cgacggagac gactgccgac ggacgaacgg
     1381 ccacgtctgc ggcgcctggc aatggcggag gcgtcggagc cggacgtgat tgcggcgccg
     1441 gctgtgcggt gcgggcgacg ggcgcagcgg cctcggccga ggcacgcggc gggagcggag
     1501 gcggaggcgg ataatcggct ggggctgtcg gacttggtgt tggtccagct gtgccggtgg
     1561 tccgcgggga agcc
//
LOCUS       DATIML010001258         4502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4308700, whole genome shotgun sequence.
ACCESSION   DATIML010001258 DATIML010000000
VERSION     DATIML010001258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4502
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4308700"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..833
                     /locus_tag="VLJ38_21720"
     CDS             <1..833
                     /locus_tag="VLJ38_21720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42221.1"
                     /translation="LALTLHFGAREAQAQTKPAPATPAAAPAAPPPAAPAASTAAAPS
                     APPPLAASPLQPGEAPPPQQVEPGNPPPPGYAGTPNGYYSSYPAAPAYEPPPPPPKKR
                     GRPDTVKLTYATAVGMGATHDFAADFSFIGFAADWRTRVTEAFWPGFTVAWQVLYNKE
                     YRTLSHNDVTFSGTVATTLNVFPILADADYFFMTDREGIRPYAGIGLGLYAAEHRIDW
                     NIWTVQDTSWHFGFAPELGVVLPTGSVGLVLTTKFNYAFASGGWDQILYWNFNIGVEL
                     "
     gene            830..1639
                     /locus_tag="VLJ38_21725"
     CDS             830..1639
                     /locus_tag="VLJ38_21725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42222.1"
                     /translation="MSISKLVSGVAGGLLATLSLVPLARAQANPVAPTPNAAPTNAAP
                     VAAPAPAPIATAAPSAEAAGRVIVLPPCAPAPRKLDPLYGQGAFFMRLTVGPGYLWGH
                     GDPKTELTGVSAGFEATLGGFILQNFALHADVGWMNTYNPDFTVDGTTLTSTSVIFQA
                     STFRIGASYYFQPIRVYASLSAGFGVAALTAYSWLSDGSVGLVGTEYTKVGPSFAVEV
                     GKEFELSDYWGLGLAAHYEFLSVDPGDDHSRVTIGMAQQISLRFLATFGER"
     gene            complement(1677..2693)
                     /locus_tag="VLJ38_21730"
     CDS             complement(1677..2693)
                     /locus_tag="VLJ38_21730"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSU42223.1"
                     /translation="MRIRLLSQLLVLVLVLGAWTASAFAAPLKLVSDVWPPFTDVEGK
                     PHEALDLVKAALLRGGAQSKTSILPWADAEAGLEQGKFDGSAAMWKTPARDKYLYYSQ
                     PYLENRLVLVSRKGENVSMKSMKELAGKRVALTTGYGYGTEITNVPGVTYVYRSSDAE
                     CLRAVLANDADYLLLDELMVRHLYEFYGQKAATLIATGQAPLVRYGLRFALRKDYPRA
                     ESIIDEFNHAVQKMMQDGTYNVLLHVAWIQTDVDGDGVPDFIASKRNVPKSHGDPSGS
                     FTGYPIFYPANTPPDMKASAKYLVDGKSYNTWGDAATTLERGGDTKGRGLYKYSTGVV
                     LLQF"
     gene            complement(3239..4090)
                     /locus_tag="VLJ38_21735"
     CDS             complement(3239..4090)
                     /locus_tag="VLJ38_21735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42224.1"
                     /translation="MSDRPNDMHARLSLAAFVAVLCLGGSALADQLENPRTDYTAYTR
                     PKGRSAVGPLKLELGIIDEVEVGTYPLPWFAFPILKTPIPNGYLKLKSFWGGPFTLAL
                     GGGVTYIDAKAIAKLADNNASASAFSTVAELDASYRFDERFSLSLGFDYAHISAVGNK
                     KDEATSLEGASTAHTYSTRVFGEWRLTRVFALTLLLRYLIYQSPVSADSTTNNGPITV
                     TTDLSAESAQQRRFTIVPGVSFVFDRWELSTGVGYGVFYLPVLGLATTKAWPVVDFAF
                     AYRFDLY"
     gene            complement(4054..>4502)
                     /locus_tag="VLJ38_21740"
     CDS             complement(4054..>4502)
                     /locus_tag="VLJ38_21740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42225.1"
                     /translation="VRCPGELDNPDYDPAVNGTATLTLAVADTRIRRTFGGHADGCVL
                     KGDIAGQPARIRLDGNIAFDLGRDVGVGQRWSGRLLAYLPGELEVAGYTFRSVSARFT
                     GDQLEHLIELDDGKFVILTLNASGLGLRDKNGIWVCPTGQTTCTRG"
BASE COUNT          760 a         1486 c         1460 g          796 t
ORIGIN      
        1 cgctcgcgct gacactccac ttcggcgcgc gcgaggcgca ggctcaaacc aagccggcgc
       61 cggcaacgcc cgccgccgcg ccggcggccc ctccgcccgc cgcacccgca gcgtccacgg
      121 cagcggctcc ctcggcgccg cctccactcg ctgcctcgcc gttgcagccg ggagaagcgc
      181 ctccaccgca gcaggtagaa cccggtaatc cgccgccgcc cggctacgcc ggaaccccga
      241 acggctacta ctcgtcgtat cctgccgccc ccgcgtacga acccccgccg cccccgccca
      301 aaaagcgcgg ccggcccgac acggtgaagc tcacctacgc cacggccgtc ggcatgggcg
      361 cgacgcacga cttcgcggcg gatttcagct tcatcggctt cgccgccgat tggcgcacgc
      421 gcgtgacgga agcgttctgg cccggcttca cggtcgcctg gcaggtgctc tacaacaagg
      481 agtacaggac gctgagtcac aacgacgtga ccttctccgg caccgtcgcg acgacgctca
      541 acgtcttccc gatcctcgcc gacgccgact acttcttcat gaccgaccgg gagggcattc
      601 ggccgtacgc cggcatcggt ctcgggctct acgccgccga gcatcgcatc gattggaaca
      661 tctggacggt gcaggacacg agctggcact tcggtttcgc ccccgagctc ggggtcgtgc
      721 tgccgacggg ctcggtcggc ctcgttctca cgaccaagtt caattatgcg ttcgcgtcgg
      781 gaggctggga tcagatcctt tattggaact tcaacattgg ggtggagctg tgagcatctc
      841 gaagcttgtc tcgggtgtcg ccggaggcct cctcgcgacg ctgtcactcg tgccgctggc
      901 gcgcgcacaa gccaacccgg tagccccgac cccgaacgct gcgccgacca acgccgcgcc
      961 cgtcgcagcg cccgcgcccg ctccaatcgc gacggccgcg ccctcggccg aagcagccgg
     1021 acgcgtcatc gtattgccgc cgtgcgcgcc ggctccgcgc aagctcgatc cgctctacgg
     1081 tcagggcgcc ttcttcatgc gcctgacggt tggccccggt tacctgtggg gccacggcga
     1141 tccgaagact gagctcacgg gagtctcggc tggattcgaa gcgacgctcg gcggcttcat
     1201 ccttcagaac ttcgcgcttc acgccgacgt cgggtggatg aacacttaca atcccgactt
     1261 cacggtcgac ggcacgacgc tcacttcgac gagcgtgatt ttccaggcgt cgacgttccg
     1321 gatcggcgcc tcgtattatt tccagcccat ccgcgtgtac gcgtcgctgt ccgccggttt
     1381 cggcgtcgcg gcgctcacgg cctacagctg gctttcggac ggcagcgtcg ggctcgtcgg
     1441 cacggagtac acgaaggtcg gcccgtcgtt cgccgtggaa gtcggcaagg agttcgagct
     1501 ttcggactac tggggcctcg gactcgccgc ccactacgag tttctgtccg tcgatcccgg
     1561 cgacgatcac agccgcgtca cgatcggcat ggcgcagcag attagcctcc gcttcctcgc
     1621 gactttcggc gagcgctgag gccgagcgcc tccctcgcgg gggtgcttcg ccagcgttag
     1681 aactgcaaga gcacgacccc cgtcgaatac ttgtagagac cgcgcccttt cgtgtcgccg
     1741 ccgcgctcga gcgtggtcgc ggcgtcgccc caggtgttgt agctcttgcc gtctaccagg
     1801 tacttcgccg acgctttcat gtcgggcggg gtgttggcgg ggtaaaagat gggatagccg
     1861 gtgaacgagc ccgagggatc gccgtggctc ttcggcacgt tgcgcttcga cgcgatgaag
     1921 tccggcacgc catcgccgtc gacgtcggtt tggatccagg cgacgtggag cagcacgttg
     1981 taggtgccgt cctgcatcat cttttgcacg gcgtgattga actcgtcgat gatcgactcg
     2041 gcgcgcggat aatctttacg aagcgcgaag cgtaggccgt aacggacgag cggcgcctgg
     2101 ccggtcgcga tcagggtcgc cgctttctgg ccgtagaact cgtacaggtg gcgcaccatg
     2161 agctcgtcga gcaagagata atcggcgtcg ttcgcgagca cggcgcgcag gcattcggcg
     2221 tcgctcgagc gatagacgta ggtcacgccg ggtacgttcg tgatctccgt accgtagccg
     2281 tagccggtcg tgagcgcgac gcgcttgccg gcgagctcct tcatggactt catgctgacg
     2341 ttctcaccct tgcgactgac gagcacgagc cgattctcga ggtacggctg cgagtaatag
     2401 aggtacttgt cgcgcgcggg ggttttccac atcgctgcgg agccgtcgaa tttaccttgt
     2461 tcgagccctg cctccgcgtc cgcccagggc aagatgctcg tcttgctctg cgcgcccccg
     2521 cgcaagagcg ctgctttgac gagatcgagc gcctcgtgcg gcttgccttc cacgtccgtg
     2581 aagggtggcc acacgtccga gacgagcttg agcggagctg cgaaggcgct cgccgtccag
     2641 gcgccgagca cgagaacgag cacgagcagc tgggacagca atcgaatgcg catcgggacg
     2701 gacctcctac tatctgacgg ggaatgtagc cgcagcgcgt cagtgagacc agaagtcaca
     2761 ggcccaagac cagctcgcgt tccacgacga cacagtcagc cgcagaactt acgcgacgga
     2821 cgagcggaac gtaagatccg cgaagcgcga ggcaagattc gcgaagccag tgacaacgtc
     2881 gttaccgtgc gcaagggccc gccttgcggt ctccgagttc gcgtcttacc tggtcgacca
     2941 cggccgcatg aacgagaaat cgaaccgttc tggattggat tcgcggcgac ggggagaccg
     3001 cgcaacgctg gctcgagcca agtctcgcgc gacgctgcgg ctgatcgaag gcggggccct
     3061 cgagacaacg agcggcagct cacgggcgcc cgagcaattc ggcgccccag cgcttttttt
     3121 gcgcgaagta caaagtagct tcaactactg catttacttt tgtgcgcgct ggattgggcg
     3181 agttcagcgt catcggttcg aagcgccgct gcgctcctag ctttgtcgcg gccgccgctc
     3241 aatacaggtc gaaccggtag gcgaacgcga agtccacgac gggccacgct ttcgtggtcg
     3301 cgagcccgag gaccggtagg tagaacacgc cgtaaccgac gcccgtgctg agctcccagc
     3361 gatcgaagac gaaggagact ccgggaacga tggtgaagcg gcgttgttgc gcgctctcgg
     3421 cgctgagatc cgtggtgacg gtgatcgggc cgttgttcgt ggtgctgtcg gcgctcaccg
     3481 ggctttgata aatgaggtag cggagcagca gcgtgagagc gaacacgcgc gtcaggcgcc
     3541 attcaccgaa cacgcgcgtg ctgtaggtgt gcgccgtgga agcgccttcg agtgaagttg
     3601 cttcgtcctt cttgttgccg acggcgctga tgtgcgcgta gtcgaagccg agactcaggc
     3661 tgaagcgctc gtcgaaacgg tagctcgcgt cgagctcggc gaccgtggaa aacgcgctcg
     3721 cactcgcgtt gttgtccgcg agcttagcga tcgctttcgc gtcgatgtag gtcacgcctc
     3781 cgccgagcgc cagcgtgaac ggcccgcccc agaagctctt gagcttcagg tagccgttcg
     3841 ggatcggcgt cttcaagatc ggaaaggcga accacggcag cggataagtg ccgacctcga
     3901 cttcgtcgat gatgccgagc tcgagcttga gcggaccgac ggcggagcga cctttcggtc
     3961 gagtgtacgc cgtgtagtcg gtacgtggat tttccagttg gtccgcgagc gcactgccgc
     4021 cgaggcacag cacggcgacg aaggccgcga ggctcagccg cgcgtgcatg tcgtttggcc
     4081 ggtcggacac acccagatgc cattcttgtc gcgcagcccg agcccggaag cgttgagcgt
     4141 caagatgacg aacttgccgt catcgagctc gatcaaatgc tcgagctggt cgcccgtgaa
     4201 acgcgcgctc acgctcctga aagtgtaacc cgccacctcg agctcaccgg gtaggtaggc
     4261 gagtaaacgg cccgaccagc gctgtccgac cccgacgtcg cggccgaggt cgaacgcgat
     4321 gttgccgtcg agccgaatgc gcgcgggctg ccccgcgatg tcacccttga gcacgcagcc
     4381 gtcggcatgg ccgccgaagg tgcgccggat gcgagtatcg gcgacggcga gcgtgagcgt
     4441 cgccgtgccg ttgaccgcgg gatcgtagtc ggggttatcg agctcgccgg gacagcgaac
     4501 ct
//
LOCUS       DATIML010001259         3543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1132637, whole genome shotgun sequence.
ACCESSION   DATIML010001259 DATIML010000000
VERSION     DATIML010001259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3543
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1132637"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2070)
                     /locus_tag="VLJ38_21745"
     CDS             complement(<1..2070)
                     /locus_tag="VLJ38_21745"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSU42226.1"
                     /translation="MKFTDIFIRRPVLAIVVNLVILIAGLQAVRSLNVRQYPRLDSAT
                     ISVKTAYVGANADLVRGFITTPLERSIAAADGIDFMESQSTQGLSTINVRLKLNFPAA
                     AALSDITARVNQVRADLPPEAEVPSISIEPSDSQFAAMYLTFGSSILEPNQVTDYLLR
                     VVQPRLSAIEGVQRAEILGGRTFALRAWLKPDRMTALHVSPLAVRQALAANNTLSAVG
                     ETKGQYVQVDLTATTDAQNVDTFKKLVVRAENGALVRLEDVAEVVLGADTYDQDVRFT
                     GKKEVFMGVFVLPNANSLDVIAHVRDSIQTIQGELPTGMRARIAFDSTDYINHAIKEV
                     TRTLVETIFIVMIVIYLFLGSLRSVLVPVVAIPVSLIGAVFLMQAFGFTLNLLTLLAI
                     VLSVGLVVDDAIVVVENVARNIHLGKSPFDAAVASARELVGPIIAMTITLAAVYTPIG
                     FQGGLTGALFREFAFTLAGAVLISGIVALTLSPMMSSRLFKSERNEGRFARMIDHGFE
                     RLKRGYGRALDWTLAMRPAVYTVWILLTLAVFPLYMFSPAELAPAEDQGAVFGAIDVP
                     ANATLEQLVPYTEQVNSIFQTVPEFSQSFQITLPQQGFGGAIMKPWDERKRSIFPIQA
                     ELSQKTMGIAGVRAPVFLPPALPSAGFFPVEFVIASTADHKELARYADEIVQEAVKSG
                     EFAFPPVL"
     gene            complement(2283..>3543)
                     /locus_tag="VLJ38_21750"
     CDS             complement(2283..>3543)
                     /locus_tag="VLJ38_21750"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU42227.1"
                     /translation="RPGYARPQSERVTIPPPPSPEFPKMPPLPSGPAPARSRSGRRAL
                     RYILVIGGALALIALLGFLKFSQISMLMNFGAQMQKAGPPPEVVSTRVADEQTWEHTL
                     NAVASVVSAKGVALANDAAGVVSAIHFDSGQTVKQGQVLVELDARVERAQLASTRARR
                     ELAGSEAQRSQNLFKSGSIAQAQVDADVAQSKSLAAEESSLQAQIDRKIIRAPFSGKL
                     GIRQVNLGQYLAPGTTVSVLESADADYVDFTLPQENLPLLHAGMTVRATPEGVKAEPI
                     EGQISAVDPTIDPQTRAVKIRARFAAEDQFRPGMFLRVAVVLPEKDKVVAIPLTSVMH
                     ASYGDSVFVVGEKPGPDGKPRKVAEQKFVKLGDQRGDFVAVSEGLKAGEEVVTAGAFK
                     LRNGLPVVIDNKSVRLDPSLDPKPVNH"
BASE COUNT          625 a         1135 c         1199 g          584 t
ORIGIN      
        1 gagcacgggc gggaacgcga attcaccgct cttgacggct tcctgcacga tctcgtccgc
       61 gtagcgcgcg agctccttgt gatcggccgt ggacgcgatc acgaactcga ccgggaagaa
      121 tccggcgctc ggcagcgcgg gcggcaagaa caccggcgcg cgcacgcccg cgatgcccat
      181 cgtcttttgg ctgagctcgg cttggatcgg gaagatgctg cgcttgcgct cgtcccacgg
      241 cttcatgatc gcgccgccga aaccctgctg cggcagcgtg atctggaagc tctggctgaa
      301 ctcgggcacc gtctggaaga tcgagttcac ctgctcggtg tagggaacga gctgctcgag
      361 cgtggcgttc gcgggcacgt cgatggcgcc gaagacagcg ccttgatcct cggccggcgc
      421 gagctcggcc ggcgagaaca tgtatagcgg gaacacggcg agcgtcagca agatccacac
      481 cgtgtacacg gcgggacgca tggcgagcgt ccagtcgagc gcgcggccgt aacctcgctt
      541 gagccgctcg aagccgtggt cgatcatgcg cgcgaagcga ccttcgttgc gctcggattt
      601 gaacaagcgc gacgacatca tcggcgacag cgtcagcgcc acgatgccgg agatcagcac
      661 ggcgcctgcg agcgtgaagg cgaactctcg gaagagcgcg cccgtgaggc cgccctgaaa
      721 gccgatcggc gtgtagacgg ccgcgagcgt gatcgtcatc gcgatgatcg gacccacgag
      781 ctcgcgcgcg ctcgcgacgg cggcgtcgaa cggcgacttg ccgaggtgaa tgttgcgcgc
      841 gacgttttcg accacgacga tcgcgtcgtc caccacgaga ccgaccgaga gcacgatcgc
      901 gagcagcgtc agtaagttca gcgtaaagcc gaacgcctgc atcaagaaca cggcaccgat
      961 gagcgacacc gggatcgcga cgaccggcac gagcacgctc cggagcgagc ccaggaacaa
     1021 gtagatcacg atcatgacga tgaagatcgt ctcgacgagc gtgcgcgtga cctccttgat
     1081 cgcgtggttg atgtagtccg tcgaatcgaa cgcgatgcgc gcgcgcatgc ccgtcggcag
     1141 ctcgccctga atcgtctgga tcgagtcgcg cacgtgcgcg atcacgtcga gggagttggc
     1201 gttcgggagc acgaacaccc ccatgaacac ctcttttttg cccgtgaacc gcacgtcctg
     1261 gtcgtaggtg tcggcgccga gcaccacctc cgccacgtcc tcgagccgga cgagcgcgcc
     1321 gttttccgcg cgcacgacga gcttcttgaa ggtgtcgacg ttctgcgcgt cggtcgtcgc
     1381 cgtgaggtcg acctggacgt actgcccctt ggtttcaccg acggcggaga gcgtgttgtt
     1441 cgcggcgagc gcctggcgca cggccagggg actcacgtgc agcgccgtca tgcggtccgg
     1501 cttgagccaa gcgcgcaggg cgaacgtgcg accgccgagg atctcggcgc gctgaacgcc
     1561 ctcgatcgcc gacagccgcg gctgcacgac acggagcagg taatcggtga cctggttcgg
     1621 ctcgaggatg ctcgagccga acgtgaggta catcgccgcg aactgagagt ccgacggttc
     1681 gatgctgatc gagggcactt ccgcttcggg cgggagatcg gcgcgcacct gattcacgcg
     1741 cgccgtgatg tcggagagcg cggcggcggc cgggaagttg agcttgagcc ggacgttgat
     1801 ggtcgagagc ccctgagtgc tctgcgactc catgaagtcg atgccgtcgg cggcggcgat
     1861 cgagcgctcg agcggcgtgg tgatgaagcc gcgcacgaga tcggcattcg cgccgacgta
     1921 cgccgtcttc acgctgatgg tcgcgctgtc gagccgcgga tactgccgca cgttcagcga
     1981 acgcacggcc tgcaagcccg cgatcaaaat gacgagattg acgacgatcg ccaggaccgg
     2041 ccggcgaatg aaaatgtccg tgaatttcat ggcggaattc ccgcgttctg ggcttggaga
     2101 cggctgatgt gcgggttcgc gggggcaaag cccccgcgcg aaaggacgtg ggagtcttgg
     2161 cggaacagat cacgatcggc gcgagcggga acaccccacg agaattgccg gcggggccgg
     2221 cggctgggcc aggtcagcgc gccaaggacg cctggccttc cgagaaaaac caaagaacaa
     2281 actcaatgat tcaccggctt gggatccaga ctcggatcta gcctcacgct cttgttatca
     2341 atcaccaccg gcaagccgtt acgcagcttg aacgcgccgg ccgtcacgac ttcttcgccg
     2401 gccttgaggc cttcgctgac ggccacgaaa tcgccgcgtt gatcaccgag tttgacgaat
     2461 ttctgttcgg cgaccttgcg cggcttgccg tcgggacccg gtttctcgcc gacgacgaac
     2521 actgaatcgc cgtacgaagc gtgcatgacg ctcgtgagcg gaatcgcgac gaccttgtcc
     2581 ttctcgggga gcaccacggc gacgcgcaag aacatgccgg gacggaactg atcttccgcc
     2641 gcgaaccgcg cgcggatctt cacggcgcgc gtctgcgggt cgatcgtcgg atccacggcg
     2701 ctgatctgcc cttcgatcgg ctccgccttc acgccctcgg gcgtcgcgcg caccgtcatg
     2761 ccggcgtgca agagcggcag gttttcctgc ggcagcgtga aatcgacgta atcggcgtcc
     2821 gcggactcga gcacgctcac cgtcgtgccc ggcgcgaggt actggccgag gttgacctgc
     2881 cggatgccga gcttgccgct gaacggcgcg cggatgatct tgcgatcgat ctgcgcttgc
     2941 agtgagctct cctcggccgc caggctcttc gactgcgcga cgtcggcgtc gacctgcgct
     3001 tgagcgatgc tgccgctctt gaacaggttt tgcgagcgct gcgcttcgct ccccgcgagc
     3061 tcccgccgcg cgcgtgtgga ggcgagctgc gcgcgctcga cacgagcgtc gagctcgacg
     3121 agcacctgac cctgcttcac ggtctggccg gagtcgaaat ggatcgccga gacaacgccc
     3181 gccgcgtcgt tggcgagcgc gacgcccttg gcggacacga cgctcgcgac ggcgttcagc
     3241 gtgtgctccc aggtttgctc gtcggcaaca cgggtgctca ccacctcggg tggcgggccg
     3301 gccttctgca tctgggcccc gaagttcatc agcatcgaga tttgcgaaaa cttcaggaag
     3361 ccgagcagcg cgatcagcgc gagcgcgccg ccgatcacca aaatgtaacg gagcgcgcgg
     3421 cgacccgagc gcgaccgtgc cggcgcaggc cccgagggaa gcggaggcat cttcggaaat
     3481 tccggtgacg gcggaggtgg gatggtgacg cgttcactct ggggtcgggc ataacccggt
     3541 cgt
//
LOCUS       DATIML010001260         5893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5179986, whole genome shotgun sequence.
ACCESSION   DATIML010001260 DATIML010000000
VERSION     DATIML010001260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5893
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5179986"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1276
                     /locus_tag="VLJ38_21755"
     CDS             <1..1276
                     /locus_tag="VLJ38_21755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42228.1"
                     /translation="QVAASGAWLVFCRQSGVPHPELVVGAGAPEAIDDLLAWDSSGRF
                     LVLRRGNAVWLLDVENNLSTNLSELGFDDRDDVLDYRQHRALAFDPRGEMLAYVRRRE
                     RVELVLRTLATGEEQVVAGTSGEPWRFAWDANGRTLVVSSVAPDPVSGRTTFPVRLRR
                     GPRLACSGILPHFHVNPDSGERPATTLVSRDGLTLQPAPDFAAPFGDGYVGRGADGAL
                     VLVGAKSRQTLADADCGGRVLFADPERGLLLVTCNNDKLRPKRVGVELVGVRYRQELG
                     AVVQSLALDRWPALPVRLVPLYPGSDVLLVDLDTRKTVPLTPGDRVLATSGEFALVRR
                     DKALVWFDTVHGTDVRLASAIPPFAGLAVQGTMVAVGSLVVDARAGRVLGSVPGRPLA
                     LTWDGAALVAEGGAASATAFARGPLRWHTPTP"
     gene            1297..2583
                     /gene="tyrS"
                     /locus_tag="VLJ38_21760"
     CDS             1297..2583
                     /gene="tyrS"
                     /locus_tag="VLJ38_21760"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HSU42229.1"
                     /translation="MSAPVDLLSELEARGLLYQTTDRAAFSAHLGQGSRSVYGGFDPT
                     GDSLTIGNLVPLLLLRRFQLAGHRPFALVGGGTGLIGDPSGKDAERPIRDRDDVAHNV
                     ARIRSIFERILDFSGPSGAVLVDNADWLLKLSYVEVLRDVGKHFSVNMMIQKDSVRER
                     LQNREQGISYTEFSYMLLQAYDFLHLFRAHGVTAQVAGSDQWGNTVAGIDLIRRTERT
                     EAFGMTVPLITKADGGKFGKTEAGAVWLSADRTSPYEFYQFWLNATDVDAKRFLAIYT
                     FLPLPEIARIAAEHAEDPGARLAQRTLAAEVTRIVHGQAGLERAEAATQALFSGEVRA
                     LPEDALRELFASAPSTTLPLGRLAAPGAAIVELLVEGGVVKSKREAREFLEQGAISVN
                     GERATTSSSFSAEALLFGQMLLVRRGKKSWHVLRFE"
     gene            complement(2654..4615)
                     /locus_tag="VLJ38_21765"
     CDS             complement(2654..4615)
                     /locus_tag="VLJ38_21765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HSU42230.1"
                     /translation="MPPTSGTGGGLSFAEPGGRGGGGTGGTGFDASPVVTAAHTPPAV
                     SGGTLLALQGGGRAVLSDTDRDRLLVVDVENLTVLAETALGAGAEPGRLVEDAAGRVH
                     AVLRGSGEVVSIDAVSGAVLNRRSVCQAPRGIAFDKASDQLVVACLEGSLVELPTAGG
                     PATRVTAVASDLRDVAFLNGDLVVTRFRSAELLFLDAARNVVRTTNLAGDGKGLDASV
                     AWRAIATADGTLAISHQRSFHGRIAVIGSTGGTSGTTGDSSGGTSGDSATPHVEIAGS
                     GGVAGTGGTAAAGGVAGTSGTGTSGGDAGADDEFGSPSPSGYGSPFVPCSSVVEGTLT
                     FAAADGTLHVGPNLQGGVLPVDIATNATRVAVAFAGAQANTGSVGVYTRARLLTATPS
                     DCLETDHFEASPNVVAVAFDAKSGKLLLQRREPSELEVVNLDSPGTTNTLSLGGVSTF
                     DTGHSMFHTDSGGGIACASCHPEGTDDGRVWNFSDVGARRTQPLDVGLAGSAPFHWDG
                     ELADFGALMDRIFVERMGGPVESDERKNALEEYIYTLPRRPAARDASDPAAARGKIWF
                     ESAATGCTTCHSGPNLSSGGFGDIGKGPALQVPSLVAVSARAPYMHDGCAATLLARFD
                     PNCGGSAHGDVSTLTSADLADLVAYLETL"
     gene            complement(4861..>5893)
                     /locus_tag="VLJ38_21770"
     CDS             complement(4861..>5893)
                     /locus_tag="VLJ38_21770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSU42231.1"
                     /translation="SRAWSTGFEAANVRLILGFVYEPSIGDRDGDGYKDDVDKCPDEP
                     EDFDGFQDEDGCPDPDNDQDGILDVNDRCPDIPEDRDGDHDEDGCPEGKADGDRDGDG
                     IPDSKDKCPDVPEDRDGFEDEDGCPEADNDKDGIPDTADQCPNDAEDKDKFEDADGCP
                     DPDNDHDQIPDVRDKCPNDPETYNGYQDEDGCPDKGKVIIEGNEILILEKVQFETDSA
                     RILPASNEILDAVAATLKGHPEFLVLEIAGHADERASDEHNLKLTKARAASVMDALRA
                     RGLSSSRMISQGYGEYCPLDNASTPAAWEKNRRVDFKVVKTEDGETGVARGCPVALDK
                     GVKPPPIPR"
BASE COUNT          876 a         2075 c         1980 g          962 t
ORIGIN      
        1 gcaggtcgca gcgagcggcg cgtggctcgt cttctgccgg cagagcgggg tgccgcatcc
       61 ggagctcgtc gtcggcgccg gcgcgccgga agcgatcgac gacctcctcg cctgggatag
      121 ctccgggcgc ttcctcgtgc tgcgccgcgg caacgccgtc tggctgctcg acgtcgaaaa
      181 caacctttcg accaacttga gtgagctcgg gttcgacgat cgcgacgacg tgctcgacta
      241 ccgccagcac cgggcactcg ccttcgatcc tcgcggtgaa atgctcgcct acgtccggcg
      301 ccgcgagcgc gtcgagctcg tgctgcgcac gctcgccacg ggcgaagagc aggtcgtcgc
      361 cggcacgagc ggtgagcctt ggcgctttgc ctgggacgcg aacggacgga cgctcgtcgt
      421 ctcgagcgtc gcgcccgatc cggtgagcgg gcgtacgacg ttcccggtgc gcctccgccg
      481 tgggccgcgg ctcgcttgca gcggcatact gccgcatttt cacgtgaatc ccgactccgg
      541 cgagcggccc gcgaccacgc tcgtctcacg cgacggcctc acgctccagc cggcgccgga
      601 cttcgcagcg ccgttcggcg acggctacgt cggacgcggc gcggacggtg cgctcgtgct
      661 ggtcggcgcg aaaagtcgcc agacgctggc ggacgcggac tgcggcgggc gcgtgctctt
      721 cgccgacccc gagcgtggct tgctgctcgt cacgtgcaat aacgacaagc tgcggccgaa
      781 gcgcgtcggc gtggagctcg tgggcgtgcg ctaccggcag gagctaggcg cggtcgtgca
      841 gtcgctcgcg ctcgatcgct ggcccgccct gcccgtgcgg ctagtgccgc tctatcccgg
      901 ttcggacgtc ttgctggtcg atctcgatac gcgcaaaacc gtgccgctca cgccgggcga
      961 tcgcgtgctc gcgacgagcg gtgagttcgc cctcgtgcgg cgcgacaaag ccctcgtctg
     1021 gttcgacacc gtgcacggca ccgacgtgcg gctcgcctcc gcgatcccgc cgttcgccgg
     1081 gctcgccgtg caaggaacca tggtcgcggt cggttcgctc gtcgtcgatg cgcgcgcagg
     1141 ccgcgtgctc ggcagcgttc caggccggcc actggcgctc acgtgggacg gcgccgcgct
     1201 cgtggccgaa ggcggcgccg cgagcgctac ggctttcgcg cgcgggccgc tgcgctggca
     1261 cacgcctaca ccctgacaat gctaaaagcg gtgccaatga gcgcaccagt cgatctgttg
     1321 agcgagctcg aggctcgcgg gctcctttac caaaccaccg atcgcgcggc gttcagcgcg
     1381 cacctcgggc aaggctcgcg ctcggtttac ggcggtttcg atccgaccgg cgactcgctc
     1441 acgatcggca acctcgtgcc gctcttgctc ttgcgacgct tccagctcgc cggccatcgg
     1501 ccgttcgcgc tcgtcggcgg cggcacgggg ctcatcggtg atccttcggg caaagacgcc
     1561 gagagaccga tccgcgaccg cgacgacgtg gcgcacaacg tcgcgcgcat ccggagcatc
     1621 ttcgaacgca tcctcgactt cagcgggccg agcggcgccg tgctcgtcga taacgccgat
     1681 tggctgctca agctgtctta cgtcgaggtc ctgcgcgacg tcggcaagca cttttcggtc
     1741 aacatgatga tccagaagga cagcgtgcga gagcgcctcc aaaaccgcga gcaaggcatc
     1801 agctacaccg agttcagcta catgctcttg caggcgtacg attttttaca cctctttcgc
     1861 gcgcatggcg tgacggcgca agtcgccggc tccgaccaat ggggcaacac cgtggccggc
     1921 atcgacctca tccggcgcac cgagcgcacc gaggccttcg gcatgaccgt gccgctcatc
     1981 accaaggccg acggcggcaa attcggcaag acggaagcgg gcgccgtgtg gctcagcgcc
     2041 gatcgcacgt caccctacga attttaccag ttttggctca acgcgaccga tgtcgacgcc
     2101 aagcgcttcc tcgcgattta cacttttttg ccgctgccgg agatcgctcg catcgcggcc
     2161 gaacacgctg aagatcccgg cgcacggctc gcgcagcgca cgctcgcggc ggaggtcacg
     2221 cgcatcgtgc acggtcaggc cggcctcgag cgcgccgaag cggcgacgca agcgctcttc
     2281 tccggcgagg tgcgcgccct gcccgaagac gccctgcgcg agctcttcgc gagcgcgccg
     2341 tcgacgacgt tgccgctcgg acgcctcgcg gctccgggcg ccgcgatcgt cgagttgctg
     2401 gtcgagggcg gcgtcgtgaa gagcaagcgt gaggcgcgcg aatttttgga gcaaggtgcc
     2461 atcagcgtga acggcgagcg cgcgacgacg tcgagctcgt tttcggccga agcgctcctg
     2521 ttcgggcaga tgctgctcgt ccgtcgcggc aagaagtcgt ggcacgtgct ccgcttcgag
     2581 tgagcgagca cgcggcgacg cgcccaacgc cgccaccgag cgcgggtcgg gcgcgacgcg
     2641 cgtccgctgc ggctcagagc gtctcgaggt acgcgacgag atcggcgaga tcggcgctcg
     2701 tgagcgtcga tacgtcgccg tgcgcgctgc cgccacaatt cggatcgaag cgagcgagta
     2761 gcgtcgcggc gcagccgtcg tgcatgtagg gggcgcgcgc ggacaccgcg acgagcgacg
     2821 gcacttgcag cgccggaccc ttgccgatat cgccgaaccc gccgctactg aggttcggcc
     2881 ccgagtgaca cgtcgtgcag ccggtcgcgg ccgattcgaa ccagatcttg ccgcgcgccg
     2941 ccgccgggtc gctcgcgtcc cgggccgccg ggcgccgcgg cagcgtgtag atgtactctt
     3001 cgagcgcgtt tttgcgctcg tcgctctcga ctggcccgcc catgcgctcg acgaagatgc
     3061 gatccatcag cgcgccgaag tccgcaagct cgccgtccca gtgaaacggc gcgctgccgg
     3121 cgagtcccac gtcgagcggt tgcgtgcggc gtgcgcccac gtccgagaag ttccagacgc
     3181 gtccgtcgtc ggtgccctcc gggtgacacg acgcgcaagc gatgccgccg ccgctgtcgg
     3241 tgtggaacat ggagtgcccc gtgtcgaacg tgctcacgcc gccgagcgag agggtgttcg
     3301 tcgtgcccgg ggaatcgaga ttcaccacct cgagctcgga gggctcgcgg cgctgcaaga
     3361 gcagcttgcc gctcttcgcg tcgaaggcga ccgccacgac gttcggactc gcctcgaagt
     3421 ggtccgtctc gagacaatcg ctcggcgtcg cggtcaaaag ccgagcgcgc gtgtacacac
     3481 ccaccgagcc cgtattcgcc tgggctccgg cgaacgcgac agccacgcgc gtggcgttgg
     3541 tcgcgatgtc gaccggcaag acgccaccct ggagattcgg gccgacgtgc agcgtgccgt
     3601 ccgctgcggc aaaagtcagc gtgccctcga cgaccgagct gcacgggacg aaaggggaac
     3661 cgtatccact cgggctcggt gacccaaact catcatccgc tccggcgtcc ccgccgctcg
     3721 tcccggtacc gctggtgccc gcaacgccac ccgccgcggc ggtgccgccg gttcccgcaa
     3781 cgccgccgct ccccgcgatc tcgacgtgcg gcgtcgcgga gtcgccggac gtgccaccgg
     3841 acgagtcacc ggtcgttccg gacgtgccgc cggtcgaacc gatgacggcg atgcgcccgt
     3901 ggaacgaacg ttggtgcgag atagcgagcg tcccgtccgc cgtagcgatg gcgcgccagg
     3961 caacgctcgc gtccaagccc ttcccgtcgc ctgctagatt ggtcgtccgc accacgttgc
     4021 gcgcagcatc gagaaacagt agctctgcgc tgcgaaagcg ggtgacgacc agatccccgt
     4081 tcaggaacgc gacgtccctc agatccgagg cgaccgccgt gacgcgcgtc gccggaccgc
     4141 ccgctgtcgg caactccacg agcgagccct cgaggcaggc gacgacgagt tggtcggagg
     4201 ccttgtcgaa cgcgatcccg cgcggtgctt ggcacacgct gcggcggttg agcactgcgc
     4261 cactgaccgc atcgatgctc accacctcgc cgctgccacg cagcacggca tgcacccgac
     4321 ccgccgcgtc ctcgaccaaa cgtcccggct cggcaccggc gccgagcgcg gtctcggcca
     4381 ggaccgtgag gttttcgaca tcgacgacga gcagtcgatc gcgatccgtg tcggaaagca
     4441 ccgcccttcc gccaccctgc agcgcgagca gcgtcccacc gctcacggca ggcggcgtgt
     4501 gcgcggcagt gacgacgggc gatgcgtcga aaccggtccc gccggtgcct ccgccgcccc
     4561 taccacccgg ctccgcgaac gaaaggccac cgcccgtgcc cgacgtcggg ggcaaatcgc
     4621 cgggagcgag agtcgggccc gaagagcacc ccgcgccagc gccaatactc gccaacacca
     4681 gggccaaagt gcaacgtgta gccgaattgt tcgttctcat ccgagcctcc cgtgctcacc
     4741 gcgagcgaag accaccggct tcgtaagtgc acgcctgccg agattcggct cagcgacacg
     4801 gcgtgaggcc agcacgacga gtacgtgccg taagctccta gcccgccgcg cgggctcccg
     4861 tcagcgcggg atcggcggcg gtttcacgcc cttgtcgagg gcgaccggac aaccgcgcgc
     4921 gacgcccgtc tcgccgtcct cggtcttgac gaccttgaaa tcgacgcggc ggttcttttc
     4981 ccaggcggcc ggcgtggagg cgttgtcgag cgggcagtat tcgccgtagc cctgcgagat
     5041 catgcggctc gaagagagac cgcgcgcgcg aagcgcatcc atgacggagg cggcgcgcgc
     5101 cttggtgagc ttcaagttgt gctcgtcgct cgcgcgttcg tcggcgtgac cggcgatttc
     5161 aagcaccaag aactcggggt ggcccttgag cgtcgccgcg acggcgtcga ggatctcgtt
     5221 cgaagcgggc aagatgcgcg cgctgtcagt ctcgaactgc accttctcga ggatcaggat
     5281 ctcgttaccc tcgatgatga ccttgccctt gtcggggcag ccgtcctcgt cctggtagcc
     5341 gttgtacgtc tccggatcgt tcgggcactt gtcccgcacg tcggggattt gatcgtgatc
     5401 gttgtcggga tcggggcagc cgtccgcgtc ctcgaacttg tctttgtcct cggcgtcatt
     5461 cgggcactgg tcggccgtgt ccggaatgcc gtccttgtcg ttgtcggcct cggggcagcc
     5521 gtcctcgtcc tcgaaaccgt cgcggtcctc gggaacgtcg gggcacttgt ccttggagtc
     5581 gggaatgccg tcgccgtcgc gatcgccgtc ggctttgcct tcggggcagc cgtcctcgtc
     5641 gtgatcgccg tcgcggtcct ccgggatgtc ggggcagcga tcgttcacgt cgaggatgcc
     5701 gtcctgatcg ttgtcgggat cgggacagcc gtcttcgtcc tggaagccgt cgaaatcctc
     5761 cggctcgtcg ggacacttgt cgacgtcgtc cttgtagccg tcgccgtcgc gatcgccgat
     5821 cgagggctcg tagacgaagc cgaggatcaa gcgcacgttc gcggcttcga agccagtgct
     5881 ccaggcgcgg ctc
//
LOCUS       DATIML010001261         1854 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4309054, whole genome shotgun sequence.
ACCESSION   DATIML010001261 DATIML010000000
VERSION     DATIML010001261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4309054"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1545
                     /locus_tag="VLJ38_21775"
     CDS             <1..1545
                     /locus_tag="VLJ38_21775"
                     /inference="COORDINATES: protein motif:HMM:NF042789.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HSU42232.1"
                     /translation="PPEEQPQLASGNHGTRVLLGGALEDPYLSPGTVESTARAFSDAG
                     YRVTLEMAPGTTHTFHGRQRILARELVTGRSAPAALAGFGNVHASEALPGALPQTQNT
                     PRHGAYGLYPELVSGTPFTATRAENSRTWLYRVRPAAQQGELTPLAHATFTSEFERLP
                     PVANLTAFAPLPLPSAPTDFVDGLFTVGGAGSARLRRGYGVHLYAANRNMEDRAFYDA
                     DGELLLLPELGALTLVTELGVLDVKPGELALVPRGVRFTVLLKGAEARGYVAEVFGRR
                     FSLPERGPLGSNGLADARHFRAPAAWPEDRLAPGYRGTAKLGDALYQATQDYSPYDVF
                     AWHGNHSPYVYDLSLFTPAGYTRVDHPDPSIHTVLSAPMDEQGSHSLDLVVFPPRWDA
                     TEHSFRLPYFHRNATTEINGIVREVTTEDAMFVPGMVFLTPSMTPHAPTAAGVERHLA
                     ESAAHADRPHRYADHALWFQFETALPLSLTPWALAASQRHADWHARWGAYRSRFTATH
                     HEGEQV"
     gene            1612..>1854
                     /locus_tag="VLJ38_21780"
     CDS             1612..>1854
                     /locus_tag="VLJ38_21780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HSU42233.1"
                     /translation="MNARFFTFAVLAPVSLGTLHACSSGDDVSRGAGGSGALGGTGAL
                     TGGTSGQGGTGGSDGNPGGRSDTAGHGMNEGGANEGG"
BASE COUNT          275 a          683 c          616 g          280 t
ORIGIN      
        1 ccgcccgagg aacagccgca gcttgcgagc ggcaaccacg gcacgcgcgt cctgctcggg
       61 ggcgcgctcg aggatccgta cctcagtccc ggcacggtcg aatcgacggc gcgcgcgttc
      121 agcgacgccg gctatcgggt gacgctcgaa atggcgccgg gcacgacgca caccttccac
      181 gggcgccagc gcatcctcgc gcgtgagctc gtcacggggc gctccgcgcc ggcagcgctg
      241 gcgggcttcg gcaacgtgca cgcgagtgaa gcgctgcccg gcgcgctgcc acagacgcaa
      301 aacacgccgc ggcacggcgc ctacggcttg tacccggagc tcgtgagcgg cacgccgttc
      361 acggcgacgc gcgccgagaa cagccgcacg tggctttacc gcgtgcgccc cgcggcgcag
      421 caaggcgagc tcacgccgct cgctcatgcg acgttcacga gcgagttcga gcgcttgccg
      481 cccgtcgcca atctcacggc gttcgcgccc ttgccgctgc cgagcgcccc gaccgatttc
      541 gtggacggcc tcttcacggt cggcggcgcg ggctcggcgc gcctgcggcg cggctacggc
      601 gtgcacctct acgcggccaa ccgcaacatg gaagatcgcg cgttttacga cgcggacggc
      661 gagctcttgc tcttgcccga gctcggcgcg ctgacgctcg tcaccgagct cggcgtgctc
      721 gacgtgaagc ccggcgagct cgcgctcgtc ccgcgcggcg tgcgctttac ggtgctgctc
      781 aagggcgccg aagcgcgcgg ctatgtcgcc gaagtgttcg gccggcgctt cagcttgccc
      841 gaacgcggcc cgctcggctc gaacgggctc gccgatgcgc gccactttcg cgcgcccgcg
      901 gcgtggcccg aagatcgttt ggcccccggc tatcgcggga cggcgaagct cggcgacgcg
      961 ctctaccaag cgacgcaaga ctactcgcct tacgacgtct tcgcctggca cggcaaccac
     1021 tctccttacg tctatgatct ctcgctcttc acgcccgccg gttacacgcg cgtcgatcat
     1081 cccgatccgt cgattcacac cgtgctgagc gcgccgatgg acgaacaggg ctcgcactca
     1141 ctcgatctcg tggtcttccc gccgcgctgg gacgcgacgg agcacagctt cagactcccc
     1201 tactttcatc gcaatgcgac gaccgagatc aacggcatcg tgcgcgaagt cacgactgaa
     1261 gacgcgatgt tcgtgccggg gatggtgttt ctcacgccga gcatgacgcc gcacgcgccg
     1321 acggccgctg gcgtcgaacg tcacctcgcc gagtccgccg cacacgccga tcgcccgcac
     1381 cgttacgccg atcacgcgct ctggttccaa ttcgagacgg cgctgcccct ctcgctcacg
     1441 ccctgggcgc tcgcggcttc gcagcggcac gccgactggc acgcgcgctg gggcgcttac
     1501 cggagccgtt tcacggctac tcaccacgaa ggtgagcaag tctgaagcga tcgcgtctgc
     1561 ctcacgttcc ggcgcttgac aggggcgcgg cgcgcgccgg aaatggctat catgaacgct
     1621 cgcttcttta cttttgccgt cctcgctccc gtgtcactcg gcaccctgca cgcttgtagc
     1681 tccggtgatg acgtgagccg cggcgccgga gggagcggcg cgctgggcgg gacgggggcg
     1741 ctcaccggtg gcacgagcgg gcaaggcggc acgggcggca gcgatggcaa cccaggcggc
     1801 cgcagcgaca ccgccggcca cggcatgaac gaaggcggcg cgaacgaagg cggc
//
LOCUS       DATIML010001262         3014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4596411, whole genome shotgun sequence.
ACCESSION   DATIML010001262 DATIML010000000
VERSION     DATIML010001262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3014
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4596411"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="VLJ38_21785"
     CDS             complement(<1..414)
                     /locus_tag="VLJ38_21785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42234.1"
                     /translation="MTEADASRVAPTICQQSDRVATGTVVLGTRFRSQALAFVAVPGV
                     ILGACSSNSPAPSGIGGRGGAGDAAGIGGSSVGAGGTAGRSVSDGASGSCSNGVPCGG
                     DLAGTWTAMSACLRIGGELDLSLVGTGCLSAPVVGS"
     gene            490..1515
                     /locus_tag="VLJ38_21790"
     CDS             490..1515
                     /locus_tag="VLJ38_21790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42235.1"
                     /translation="MAFAVALLAPAYARAQSKTDGKVFTTSIEYVAPSTCPKIDDFKA
                     IVTGRLGFDPFSDDAPRHVFVSIAAGERMLDGRVEWRDEKGNFAGDQAFPVHKDDCTE
                     LVRTMGFALAVQINLLMAEQPRAAADARTRGDASNAGSPAKKAAATSAVAPKPSEDAE
                     AASASGSNESRNASRSGERWAFALGAGGSLGLGLLPKATGLVRVFGHAAFGHAELELG
                     GELSTKVSEDRADGAGFTVQAWLASAAVCGLWGPWSVCALGKGGAVNVEGERVDVPAS
                     PSGKVFLAGIRLGARQRVGSTFFFAERLEGLASLTRWTVTLDQVPVWTAPPLAGTVGV
                     DVGAIFE"
     gene            1669..2238
                     /locus_tag="VLJ38_21795"
     CDS             1669..2238
                     /locus_tag="VLJ38_21795"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU42236.1"
                     /translation="MAYLRLVRSAPPEPDADEACVPDDACVQAFDRELDYVFATLRRL
                     GAPQGEVEDLAHDLFVVLQRNWATLDTERPLRPYLFGIAFRIVCAHRRRRLREVPHPA
                     ADAEDSGPSPERMVQAQEAATLLWAALDRVPLPRRAVIIMHDLDGIAIADIAKELSIT
                     RFGAYARLHKGHKELAAALRRQQRHGVPR"
     gene            2235..2951
                     /locus_tag="VLJ38_21800"
     CDS             2235..2951
                     /locus_tag="VLJ38_21800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42237.1"
                     /translation="MSRREPSSEIDLQALFDSGREVPRQPEAVRARVLARARATAAAP
                     MLQPAPVPAHPRLPRYVVAPAAAAALALGIVGAVYALSGRWSHPGVPGGAASVAGGPS
                     PVITASSAAELPVPGRAGATSMVEAEPSVRTEPAQPRTRGPAERQAAYDAELRLMRSA
                     HTAYAAHAFANALVLVGEHARRFPAGLLAEEREALRVRCLLGSGRTAEAQRAAAAFAT
                     RFPRSVLLQRIQGELGTTAR"
BASE COUNT          478 a         1018 c         1054 g          464 t
ORIGIN      
        1 cgacccgacc acgggtgcgg agaggcaacc cgttccgacc agcgacaggt cgagctcacc
       61 accgatccgc aagcacgctg acatggccgt ccaagtcccg gcgaggtcgc caccacaagg
      121 cacgccgttc gagcacgagc cggaggctcc atcgctgacg gagcgtccag ccgtgccccc
      181 cgcgccgacg gagcttccac cgatgcccgc cgcgtcgccc gcgcccccgc gcccgccgat
      241 gcccgacggg gcgggtgaat tggagctgca agcgcctagg atgacgccgg gcacggccac
      301 gaacgccaag gcctgcgagc ggaagcgggt gccgagcacg accgtacctg tcgcaactcg
      361 atcactttgt tgacaaatcg tgggcgcgac ccggctcgca tcggcttcgg tcatgaagca
      421 ggctcgggtt tctcgctgag cggcggcttg ggataaggtt cgctggtgtt tcgagcgcag
      481 ccattcccgt tggccttcgc ggtcgcgctc ctggcgccgg cttacgctcg cgctcagtcg
      541 aagacggatg gaaaggtttt cactacgtcc atcgaatacg tcgcgccgtc cacgtgcccg
      601 aagatcgatg atttcaaggc catcgtcacg gggaggctcg gtttcgatcc tttcagcgac
      661 gacgcgccca ggcacgtgtt cgtatccatc gcggcgggcg agcgcatgct cgacgggcga
      721 gtcgaatggc gggacgaaaa ggggaacttt gccggggacc aagcgtttcc ggtgcacaaa
      781 gacgactgca cggagctcgt gcgtacgatg ggcttcgcgc tggccgtgca gatcaacttg
      841 ctcatggcgg agcaaccgcg cgctgccgcg gacgctcgaa cacgcgggga cgcgagcaac
      901 gccggttcgc cggcgaagaa agcagcagcg acttccgcgg tcgcgccgaa accgtcggag
      961 gacgccgagg ccgcgtccgc ttccggttcg aacgagtcgc ggaacgcgtc gcggagcggc
     1021 gaacgttggg cgttcgcgct tggcgcgggc ggttcactcg gcctcggatt gttgccgaaa
     1081 gcgacggggc tcgtccgcgt attcggacac gcggccttcg gtcacgcgga gctcgagctc
     1141 gggggcgagc tcagcacgaa agtcagtgaa gaccgcgctg acggtgccgg cttcaccgtg
     1201 caggcgtggc tggccagcgc ggccgtctgc ggactctggg ggccatggag tgtgtgtgcg
     1261 ctcggcaagg gaggggcggt gaacgtcgaa ggtgagcgtg tcgacgtccc cgcctcgccg
     1321 agcggaaaag tcttcttggc cgggatccgg ctgggtgcgc gccagcgcgt cggaagcacg
     1381 ttctttttcg cggagcggct cgaaggtctc gccagcctga cacgctggac cgtaacgctc
     1441 gatcaagtgc ccgtctggac ggcgccaccc ctcgccggaa ccgtcggcgt cgatgtaggc
     1501 gcaatttttg aatgaacacg agacggcgga gggacaatgt cctcctgcat gacaccgggc
     1561 gctttggctg ctctggcgcg ctccggcggg gcgctgcctc gtcgacggac cggcgcgcca
     1621 tcgcgatctc tgtcaacatt ggaggctcga gcaacagtgg ccaggagtat ggcgtatctt
     1681 cgcctcgtac gctccgctcc gccggagccc gatgccgacg aggcgtgcgt tcccgacgac
     1741 gcgtgcgtcc aagcgttcga ccgcgagctc gactacgttt ttgcgacctt gcgtcgcctg
     1801 ggagctccgc agggtgaggt cgaggacctg gcgcacgact tgttcgtcgt gctccagcgg
     1861 aactgggcca cgctggacac cgagcggccg ctacgcccgt acctcttcgg aatcgcgttt
     1921 cgcatcgtct gtgcccaccg gcggcggcgc ttgcgggagg tcccgcatcc cgccgcggat
     1981 gccgaggatt ctggaccgag cccggagcgg atggtccaag ctcaagaggc agcaacgctg
     2041 ctctgggcgg ccctcgaccg cgtgccgctc ccacgccgcg ccgtgatcat catgcatgac
     2101 ctcgacggca ttgccatcgc cgacatcgcg aaggagctgt cgattacgcg ctttggtgcg
     2161 tacgcgaggc tacacaaggg gcataaggag ctggcggccg ccttgcgacg gcagcaacgg
     2221 cacggagtgc cccgatgagc cgacgcgagc cctcgagcga aatcgacctg caagcgctgt
     2281 tcgacagcgg cagggaagtg cctcggcagc ccgaggcggt gcgcgcgcgc gtgctggcac
     2341 gggctcgggc aacggccgcg gctccgatgc tccagccggc gccggtgcct gcacaccccc
     2401 gcttgccgcg ctacgtggtc gcaccggccg ccgccgcggc gctggcgctg ggaatcgtcg
     2461 gcgccgtgta tgcgctgagc ggccgttggt cgcatcccgg agtgccgggc ggcgcggcat
     2521 cggtcgctgg gggcccgagc cccgtgatca ctgcctcgag cgcggcagag ctgcctgtcc
     2581 ccgggcgcgc cggagcgacg tccatggtcg aagcggaacc ctcggtacgc accgagcctg
     2641 cacagccgcg cacccgcggg ccggcggaac gacaagcagc ctacgacgcc gagctcaggc
     2701 tcatgcgcag cgcgcacacg gcctacgcgg cgcacgcgtt cgcaaacgct ctcgtcttgg
     2761 tgggtgagca cgctcgccgg ttcccggcag gactcttggc tgaagagcgc gaggcgttgc
     2821 gcgtacgctg cctactcggc tctggacgaa cggctgaagc gcagcgcgcc gcggctgcgt
     2881 tcgcgacgcg cttcccgcgg agcgtgctcc tccagcgaat ccagggcgaa ctaggaacca
     2941 cggcacgata ggccaccggc gaacgcgcca cgtaacgagg ctcacggctg cttcgtgttc
     3001 gacagcgctc gcca
//
LOCUS       DATIML010001263         5251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5180049, whole genome shotgun sequence.
ACCESSION   DATIML010001263 DATIML010000000
VERSION     DATIML010001263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5251
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5180049"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VLJ38_21805"
     CDS             <1..332
                     /locus_tag="VLJ38_21805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU42238.1"
                     /translation="RRVPVARHVQDYAIRVLEATHPGRDETTPLVKRYVRTGASPRGV
                     QAMLLAAKINALFAGRFAASIDDVKAAARPALRHRLLMSFEGEAEGIRPDTIIAEILS
                     TLAPAKG"
     gene            371..1303
                     /locus_tag="VLJ38_21810"
     CDS             371..1303
                     /locus_tag="VLJ38_21810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSU42239.1"
                     /translation="MGLLDWFRPRQVAKAATAASQLFDDEFQRKLEMLALVSRRVFSG
                     RLRAERRSKKKGSGVEFADHRDYVPGDDIRSVDWNVYHRFGRLLVRLYEEEEDLSIYF
                     LLDCSASMGFSGSQKFDQARRLVASLAYVGLANLDRVTVLAMTEGTLERLPTTRGKGR
                     IFTVFRFLSSLLPGGTTDLAESLRAFAAQHKRRGLAVLVSDFYDPAGFEHGINVLRYE
                     GFEPYVIHLVDRREAKPELDGDVLVVDCETGDEREVTVTPGVLDKLGKAYAEYLGDVE
                     RYCTQKRVPYLAADVSTPFDEIVLRALRRGGFLH"
     gene            1303..3180
                     /locus_tag="VLJ38_21815"
     CDS             1303..3180
                     /locus_tag="VLJ38_21815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSU42240.1"
                     /translation="MTFAGLPLGTVLGVGFGAAAVTVLLYLLKLRRRPVAVAFAPLWH
                     RVLGDRDASRLFSKLRRWLSLALQLLLIALLALALGDPRPTNALGSGRHLVLLIDTSA
                     SMQATDEKPTRLDAAKDAARRLVRGLGGSDRALVVAMGAVPVPLSTMSDDTTDLLVAV
                     DRARASDTRADLGRALELAGDALRGLANGEIIVLSDGVLAAPATAPNVAGAKLRFVPV
                     GKSGKNLALTAFSVRRYPLDKSRLEVMAELANLDTERADVELSLWGDGTIVDSERLVL
                     EPGARLARFFPDVGGARHALEARLRYADGHADALPADDRAYALVPERRRAKVLVVTAG
                     NTYLEAALLLDEYLDVTDVKPSQYPPPGAFDATIFDGVAPPPADKSGGLVYLNPPAAG
                     GPVKLGKAIKGFGFDTWDKKSAILRFTAPGDVQVATGHALEPSPGDKVVGASDQGAIL
                     VSGTRGGRAFIELGFDPRQSDLVLRPAWPLFVLNAIDSFSESDASYLSAYRTGEVWRV
                     PVPAGAHEAELMSPGGGTRPLPVEDGRAVTFGEHAGFYRLTSGTADARVVTEFAANLS
                     DLDESRILPQKKLAVGGENAPPPVVSGGGVRREIWLWLVAAVLALSVVEWITYHRRVT
                     V"
     gene            3147..>5251
                     /locus_tag="VLJ38_21820"
     CDS             3147..>5251
                     /locus_tag="VLJ38_21820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSU42241.1"
                     /translation="MDHLSPPGDGMKTRAKVAWALAALVTALAAFVGYRRLLAAADGG
                     ALSWTYHGVHYELLHPSLLGVLLAAPLLVWVLGKSLADLPLGQRVIALLLRLSFLGLL
                     GLALARLVRTEDAKSIALVALVDVSDSVPDEALADARKELQKLYAARGRDDSLRLVTF
                     AARPHLVDLEHDGKFALPASLRHGARGSAASATTNIESALELAYGLFPAGRLKRLVLL
                     TDGVETEGDLLAESGRARELGARLSVVPYRHPPPAEVAVVGLRLPDKVDIGQAFEIAA
                     DVYASRETRARARLYQGETLNGLDGVREVPLHAGMNELKFKSIVRVGGELTYELKLEP
                     LGPDEFSANNEYTATLDVPGRPSVLYVEGQPNRANYLASALGAQQFDVDVRAPAAFPA
                     SLRELERYDFVIVSDTPREAFPAAGQELVERYVRDLGGGFLFAGGDAGFGLGGWSHST
                     FERLLPVRMDAERRKEMPDVAMALVIDRSGSMTGLPMEMAKGACIATLGALKPDDLLE
                     VIAFDSAPTRYVKLEPARYRSRIQSDVERIQPGGGTEIFSALDMAYQDLSVVRARRKH
                     VILLTDGQAAEQGIRELVQAMVSASITVTTVGLGEGVKQDLLRSIADSGGGRFHFVPD
                     PNSLPKIFTRETEMVSQQAGVEEWFPVQEVAPADFLKGIAVGSAPLLHGYVATELKPA
                     PAQLVLQSERGDPILARWRA"
BASE COUNT          783 a         1832 c         1765 g          871 t
ORIGIN      
        1 tgcggcgcgt gcccgtcgca cgtcacgtcc aggactacgc catccgcgtg ctcgaggcga
       61 cgcaccccgg gcgcgacgaa accacgccgc tcgtcaaacg ctacgtgcgc acgggcgctt
      121 cgccgcgcgg cgtgcaagcc atgctgctcg ccgcgaaaat caacgcgctc ttcgccgggc
      181 gcttcgccgc gtcgatcgac gacgtgaagg ccgccgcacg gcccgcgctc aggcaccgcc
      241 tgctcatgag cttcgaaggc gaggcggagg gcattcggcc ggacaccatc atcgcagaga
      301 tcctctcgac gctcgcgcct gccaaaggtt gagcgattgc gggcgtttca gccatgatcc
      361 agagcgtgta atggggctac tcgactggtt tcggccgcgc caggtcgcta aagcggcgac
      421 ggctgcgagc cagctcttcg acgacgagtt ccagcgcaag ctcgagatgc tggcgctcgt
      481 cagccggcgc gtgttcagcg gacgcctgcg cgccgagcgg cgcagcaaga agaagggcag
      541 cggcgtcgag ttcgcggatc accgtgacta cgtgccgggc gacgacatcc gttcggtcga
      601 ttggaacgtc tatcaccgct tcggccgctt gctcgtgcgc ctgtacgagg aggaggaaga
      661 tctttcgatt tacttcttgc tcgattgctc cgcgtcgatg ggcttctccg gcagccagaa
      721 gttcgatcag gcccggcgcc tcgttgcgtc gctcgcgtac gtcggtctcg cgaacctcga
      781 tcgcgtgacg gtgctcgcga tgacggaggg cacgctcgag cggctgccga cgacgcgcgg
      841 caagggacgt atcttcacgg tttttcgctt tctttcgagc cttttgcccg gcggcaccac
      901 ggatctcgcc gagtcgctcc gcgctttcgc cgcgcagcac aagcggcgcg gtctggccgt
      961 gctcgtgagc gatttttacg atcctgccgg cttcgagcac ggcatcaacg tcttgcgtta
     1021 cgaaggtttc gagccgtacg tgatccatct cgtcgatcgg cgtgaagcga aacccgagct
     1081 cgacggcgac gtgctcgtcg tcgattgcga aacgggcgac gagcgtgaag tcacggtgac
     1141 gcccggcgtg ctcgacaagc tcggcaaggc ctacgccgaa tacctcgggg acgtggagcg
     1201 ctactgcacg cagaagcgcg tgccgtacct cgccgccgac gtgagcacgc cgttcgacga
     1261 gatcgttctg cgcgcgctcc gtcgcggagg gtttctgcac tgatgacgtt cgcggggctg
     1321 ccgctcggca cggtgctcgg cgtgggtttc ggcgcagccg ccgtgacggt cctgctctat
     1381 ttgctgaaat tgcggcgccg gcccgtagcc gtcgcgttcg cgccgctctg gcaccgcgtg
     1441 ctcggcgatc gcgacgcgag ccgcctgttc tcgaaactcc gccgctggct ctcgctcgcg
     1501 ctccagctct tgctcatcgc gttgctcgcg ctggcgctcg gcgatccgcg ccccacgaac
     1561 gcgctaggct ccggccgtca cctggtcctg ctcatcgaca cgagcgcatc gatgcaagcg
     1621 accgacgaga agccgacgcg cctcgacgcc gccaaagacg ccgcgcgacg cctcgtgcga
     1681 ggtctcggcg gcagcgaccg ggcgctcgta gtcgcgatgg gtgccgtccc cgtgccgctc
     1741 tcgaccatga gcgacgacac gacggatctg ctcgtcgccg tcgatcgcgc ccgcgcgagc
     1801 gacacgcgcg ccgatctcgg ccgcgcgctc gagctcgccg gcgacgcgct gcgcggcctc
     1861 gcgaacggcg aaattatcgt tctgagcgat ggcgtgctcg ccgcgccggc gacggctccg
     1921 aacgtcgccg gcgcgaagct ccgcttcgtg cccgtcggta aatcgggcaa aaatctggcg
     1981 ctcaccgcct tttccgtgcg ccgttacccg ctcgacaaat cgcggctcga agtgatggcg
     2041 gagctcgcga acctcgacac ggaacgcgcg gacgtcgagc tctcgctctg gggcgacggc
     2101 acgatcgtag acagcgagcg actcgtgctc gagccgggcg ctcggctcgc gcgcttcttt
     2161 cccgacgtgg gcggcgcgcg ccacgcgctc gaagcgcgcc tgcgctacgc cgacggtcac
     2221 gccgacgcgc tgcccgccga cgatcgcgcc tacgcgctcg tgcccgagcg acggcgcgcg
     2281 aaggtgctcg tcgtcacggc gggcaacacc tacctcgaag cggcgctcct gctcgacgag
     2341 tacctggacg tgacggacgt gaagccgtcg cagtacccgc cgcccggcgc gttcgacgcc
     2401 accatcttcg acggcgtcgc gccgccaccc gccgacaaga gcggcgggct cgtctacctg
     2461 aatccaccgg cggcgggcgg ccccgtgaag ctcggcaaag ccatcaaggg cttcggtttc
     2521 gatacctggg acaagaagag cgctatcttg cgcttcaccg cgcccggtga cgtccaagtg
     2581 gcgacgggcc atgcgctcga gccgagcccc ggggacaaag tcgtcggcgc gagcgaccag
     2641 ggcgccatcc tcgtctcggg cacgcgcggc ggccgtgcct tcatcgagct cggcttcgat
     2701 ccgcggcaga gcgatctcgt gctccgcccc gcttggccgc tgttcgtact caacgcgatc
     2761 gattcgttca gcgagtcgga cgcgagctac ctctcggcat accgcacggg tgaggtctgg
     2821 cgggtgccgg tgccggccgg cgcgcacgaa gcggagctga tgtcaccggg cggtggcacg
     2881 cggccgctgc cggtcgaaga cggtcgggcc gtgacgttcg gcgagcacgc cgggttctac
     2941 cggctgacga gcggcaccgc cgacgcgcgc gtcgtcaccg agttcgccgc gaacctgtcg
     3001 gatctcgatg aaagccggat tttgccgcag aaaaagctgg ctgtcggcgg ggagaacgcg
     3061 ccgcctcccg tcgtgagcgg tggcggcgtg cggcgcgaaa tttggctctg gctcgtcgcc
     3121 gccgtgctcg cgctctcggt cgtcgagtgg atcacctatc accgccgggt gacggtatga
     3181 aaacacgcgc gaaagtcgct tgggcgctcg cggccctcgt gacggcgctc gcggcgttcg
     3241 tcggctaccg gcgtctgctc gctgcggccg acgggggtgc gctcagctgg acgtatcacg
     3301 gcgtccacta cgagctcttg cacccgagct tgctcggcgt gctgctcgcg gcaccgctgc
     3361 tcgtctgggt actcggcaaa tcgctggcgg acttgccgct cggacagcgc gtcatcgcgc
     3421 tcttgttgcg gctttcgttt ttgggcctgc tcgggctcgc gctcgcgcgg ctcgtccgca
     3481 cggaagacgc gaagagcatc gcgctcgtcg cgctcgtcga cgtgagcgac tccgtacctg
     3541 acgaagccct cgccgacgcc cgcaaggagc tgcaaaagct gtacgcagca cgcggacggg
     3601 acgactcgct ccggctcgtc accttcgctg cccgcccgca cctcgtagac ctcgagcacg
     3661 acggcaaatt cgcgctgccc gcgtcgctcc ggcacggtgc gcgcggcagc gccgcgagcg
     3721 cgacgaccaa catcgagagc gccctcgagc tcgcctacgg cttgttcccc gccgggcgtc
     3781 tcaagcggct cgtgctcctc accgacggcg tcgaaacgga gggcgacctg ctcgcggaga
     3841 gcggacgcgc gcgtgagctc ggcgcgcggc tttcggtcgt gccctatcgg cacccgccgc
     3901 ccgctgaagt cgccgtggtc ggcctgcggc tgcccgacaa ggtcgacatc gggcaggcgt
     3961 tcgagatcgc ggccgacgtg tacgcgagtc gcgaaacgcg cgcgcgcgcc cgactctatc
     4021 aaggcgaaac cctgaacggc ctcgacggcg tgcgtgaagt cccgctccac gccggcatga
     4081 acgagctgaa attcaaatcc atcgtgcgcg tcggaggcga gctcacttac gagctcaagc
     4141 tcgagccgct cggtcccgac gaattttcgg cgaataacga gtacacggcg acgctcgacg
     4201 tgcccgggcg accgtcggtg ctctacgtcg aaggccagcc gaaccgcgcg aactacctcg
     4261 cgagcgccct cggcgcgcag cagttcgatg tcgacgtgcg agcgcccgcg gcctttccgg
     4321 cgtcgctccg cgagctcgaa cgttacgact tcgtgatcgt atcggacacg ccgcgcgagg
     4381 cgttccccgc cgccggccag gagctcgtcg agcgttacgt gcgtgacctc ggcggcggct
     4441 tcttgttcgc gggcggcgac gccggcttcg gtctcggcgg ctggtcgcac tcgacgttcg
     4501 agcgcttgct ccccgtgcgc atggacgccg agcgccgcaa agagatgccc gacgtcgcga
     4561 tggcgctcgt catcgatcgc tcgggctcca tgaccggctt gcccatggaa atggcgaaag
     4621 gcgcctgtat cgcgacgctc ggcgcgctaa agccggacga tttgctcgaa gtgatcgcgt
     4681 tcgattcggc cccgactcgc tacgtgaagc tcgagcccgc acgctatcgg agccgcattc
     4741 agtcggacgt cgagcgcatc cagccgggtg gcggcacgga gatcttctcc gcgctcgaca
     4801 tggcgtatca ggatctttcg gtcgtgcgcg cgcggcgcaa gcacgtgatc ctgctcaccg
     4861 acgggcaggc cgccgagcaa ggtattcgcg agctcgtgca agcgatggtc tccgcttcga
     4921 tcacggtcac gaccgtgggg ctgggcgagg gcgtcaagca agacctcttg cgcagcatcg
     4981 ccgacagcgg aggcgggcgc ttccacttcg tgccggatcc caacagcttg ccgaagatct
     5041 tcacgcgcga gaccgagatg gtgtcgcaac aagccggcgt ggaagagtgg tttcccgtcc
     5101 aagaggtcgc acccgccgat tttctcaagg gcattgccgt gggctcggcg ccgctgcttc
     5161 acggctacgt cgcgaccgag ctcaagcccg cgcccgctca gctcgtgctg cagagtgagc
     5221 ggggcgatcc gatcctcgcg cgctggcgag c
//
LOCUS       DATIML010001264         2806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_555607, whole genome shotgun sequence.
ACCESSION   DATIML010001264 DATIML010000000
VERSION     DATIML010001264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555607"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1518
                     /locus_tag="VLJ38_21825"
     CDS             <1..1518
                     /locus_tag="VLJ38_21825"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSU42242.1"
                     /translation="LAMDFRHTFLRDVVIDMYGYRRHGHNESDEPAFTQPLMYAAIAE
                     RKSVRDGYLEHLLELGGVTREEADHIAIERREHLERELSEARRPDYVRTQDWLGGFWK
                     GHQGGAEASVPDVETRVPRARLAEVLEKQTNLPDGFHPHKQIDRLLQGRRQMARGEKS
                     LDWGAAEALAFGTLVTDGVRVRFTGQDTGRGTFSHRHAVLFDVETGRTHVPLCHMAPD
                     QAPIEIYNSPLSEAGVLGFEYGYSLDWPDALVIWEAQFGDFVNAAQVIIDQFIVSAED
                     KWKRLSGLVLLLPHGYEGQGPEHSSARLERFLTLCAEENIQVVQPTTPAQCFHLLRRQ
                     ALRPWRKPLVVFTPKSLLRHPQAVSTLEECAEGRFHRVIPDARSVEARASKRTSRVLL
                     CTGKVYYDLDKRRTELGREDVEIVRVEQLYPLADRYLHAALEHLEDGTPAVWVQEEPE
                     NMGAWRTIKARFGSMLFGRFPLTAACRAESASPATGSASCHKLEQGQLLEKAFGG"
     gene            1673..>2806
                     /gene="sucB"
                     /locus_tag="VLJ38_21830"
     CDS             1673..>2806
                     /gene="sucB"
                     /locus_tag="VLJ38_21830"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR01347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0006554 - lysine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HSU42243.1"
                     /translation="MAIELKVPAVGESVTEVQIGEWLKREGDRVQRDETVVKIETDKV
                     TVDLPAPVAGVIKQIRLKQGQTAAVGDVIGILEEGDAAPRPSAPAAVPAAVTPTATTS
                     ASAAPAPAVAPASPVPTAEPARPPSTPPRDSMPPQGFARVMPSARRALKERGLKQEEV
                     EPSGPGGRLLKEDVLRHDEPPVRAPSRGVPVASEPGAEEIVPMSPFRRRVAERLLQAQ
                     TQAALLTTFNEIDMTNVMALRKQHQDAFSEKYSIKLGFMSFFVKAAIDALKLIPAVNG
                     EIRGTDIVYKNHYDIGVAVGGGKGLAVPVLRDADGLSFAELELKIADFGKRAKDNKLE
                     LHELQGGTFTISNGGIYGSLLSTPILNPPQSGNLGLHAIQKRPV"
BASE COUNT          480 a          966 c          930 g          430 t
ORIGIN      
        1 ttggccatgg atttccggca cacgttcctg cgcgatgtgg tgatcgacat gtacggctac
       61 cgccgtcacg gtcacaacga gagcgacgag ccggccttca cgcagccgct catgtacgcg
      121 gccattgccg agcgcaagag cgtgcgcgac ggttacctcg agcacttgct cgagctcggc
      181 ggcgtcacgc gcgaagaagc cgatcacatc gcgatcgaac ggcgcgagca cctcgagcgc
      241 gagctcagcg aagcgcgccg tcccgactac gtgcgcacgc aggactggct cggcggcttt
      301 tggaagggtc accagggcgg cgccgaagcg agcgtccccg acgtggagac gcgcgtgccc
      361 cgcgcgcgcc tcgccgaggt gctcgagaag caaacgaatc tccccgacgg ctttcatccg
      421 cacaagcaga tcgaccgcct gctccagggc cgccggcaga tggcgcgcgg tgaaaagtcg
      481 ctcgactggg gcgccgccga agccctcgct ttcggcacgc tcgtcaccga cggtgttcgc
      541 gtccgcttca cggggcaaga caccggtcgc ggcaccttca gtcaccgaca cgccgtgctc
      601 ttcgacgtcg agacgggacg cacgcacgtg cccctctgcc acatggcgcc cgaccaagcg
      661 cccattgaaa tctacaactc gcccttgagc gaagcgggcg tgctcggctt cgagtacggc
      721 tacagcctcg attggcccga cgcgctcgtg atttgggagg cgcagttcgg cgacttcgtg
      781 aacgcggcgc aagtcatcat cgaccagttc atcgtcagcg ccgaagacaa gtggaagcgc
      841 ttgagcggcc tcgtgctgtt gctcccgcac ggttacgaag ggcaggggcc ggagcactcg
      901 agcgctcgcc tcgaacgttt cctcacgctg tgcgcggaag agaacatcca ggtcgtgcaa
      961 ccgacgacgc ccgcgcaatg cttccacctg ttacggcggc aggcgctgcg gccctggcga
     1021 aagccgctgg tcgtgttcac gccgaagagc ctcttgcgcc atccgcaagc ggtgagcacg
     1081 ctcgaggagt gcgccgaggg ccgcttccac cgcgtgatcc ccgacgcccg cagcgtcgag
     1141 gcgcgcgcgt ccaagcgcac gtcgcgcgtc ctactctgca ccggcaaggt ctattacgat
     1201 ctggacaagc gccgtacgga gctcggccgc gaggacgtcg agatcgtgcg cgtcgagcag
     1261 ctctatccgc tcgccgatcg ctatctgcac gcggcgctcg agcacctcga ggacggcacg
     1321 ccggccgtgt gggtgcagga ggagccggag aacatgggcg cgtggcgcac gatcaaggcg
     1381 cgtttcggca gcatgctgtt cgggcgtttc ccgctcacgg ccgcgtgtcg ggccgaatcc
     1441 gcgagcccag ccaccggttc ggcgagctgc cacaagctcg agcagggaca gctcctcgaa
     1501 aaggcgttcg gcggctgagc cggccggcgc aggcccattt gtttcgggct cggccgcgcg
     1561 tctgacgcgt tttggcggcc ggtttgcgcc gttctgttct gccggtgcgc tgccgtgccg
     1621 ccgcttcggt tgttatttcc cgatgctggg gctagaaacg gcgccgatac ctatggcgat
     1681 cgagctcaag gttccggcgg tcggtgagtc cgtgaccgaa gtgcagatcg gcgaatggct
     1741 gaagcgcgaa ggtgaccgcg ttcagcgcga cgagaccgtc gtgaagatcg agaccgacaa
     1801 ggtgacggtc gatctgcccg cgcccgtcgc tggtgtcatc aagcagatca ggctgaagca
     1861 agggcagacc gcggccgtcg gcgacgtgat tggcatcctc gaagagggtg atgccgcgcc
     1921 gcgcccgtca gctcccgccg cggtgcccgc cgcggtcacg ccgaccgcga cgacgtcagc
     1981 cagtgcagcg cctgcacccg ccgtcgcacc ggcgtcgcct gtgcccacgg cggaacccgc
     2041 gcgtccaccg agcacgccgc cgcgcgactc gatgccgccg caggggttcg cgcgcgtgat
     2101 gccctcggcg cgccgcgcac tcaaggagcg cggactcaag caagaagaag tcgaaccgtc
     2161 gggacccggc ggccgtctgc tgaaggaaga cgtgctgcgt cacgacgagc cgcccgtgcg
     2221 cgcgccgagc cgcggcgtgc ccgtcgcctc cgagcccggt gcggaagaga tcgtcccgat
     2281 gtcgccgttc cgccggcgcg tcgcggagcg cctgctgcaa gctcagacgc aagcggcgct
     2341 gctcacgacc ttcaacgaga tcgacatgac gaacgtgatg gcgctgcgca agcagcacca
     2401 ggacgcgttc tccgaaaagt attcgatcaa gctcggcttc atgtcgttct tcgtcaaggc
     2461 ggcgatcgac gcgctgaagc tcatccccgc cgtgaacggc gagatccgcg gcacggacat
     2521 cgtctacaag aaccactacg acatcggtgt cgccgtgggc ggcggcaaag gtctcgccgt
     2581 ccccgtgctg cgtgacgccg atgggctaag ctttgccgag ctcgagctca agatcgccga
     2641 ctttggtaag cgcgccaaag acaacaagct cgagctccac gagctccagg gcggcacgtt
     2701 cacgatctcg aacggcggca tctacggctc gctgctctcg acgccgatcc tcaacccgcc
     2761 ccagagcggc aacctgggcc tgcacgccat ccagaagcgg cccgtg
//
LOCUS       DATIML010001265         2236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_556179, whole genome shotgun sequence.
ACCESSION   DATIML010001265 DATIML010000000
VERSION     DATIML010001265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556179"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VLJ38_21835"
     CDS             complement(<1..779)
                     /locus_tag="VLJ38_21835"
                     /inference="COORDINATES: protein motif:HMM:NF014395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toluene monooxygenase"
                     /protein_id="HSU42244.1"
                     /translation="MLLKRDEWLDLARKLDWKYSYVSERDVFPEAMSGRPWLEQAEWS
                     DWDEPYRTSFAEYVATQHEKEAAVHAVRDAVGRVADFERHDRAWLSALKLHAATLPLA
                     EFAAVVGNLRAARFGRDGAWRTMATLGALDELRHTQIPLTVLHDLVAWDPQFDWTHRL
                     FHTNEWVAVAARHFVDELLLVSNPVEFAVATHFVFETGFTNLQFVALSAVAHAVGDRM
                     FEKMVQSIQTDEARHAQIGGPVVKKLCEHDRPYAQYLVDKW"
     gene            947..1336
                     /locus_tag="VLJ38_21840"
     CDS             947..1336
                     /locus_tag="VLJ38_21840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSU42245.1"
                     /translation="MAILDHVTLTVSDYARSKAFYEKALAPLGIKLMMDFGQACGFGR
                     DKPELWLGAGPSSFQKPEQLRVITPMHLAFSATSRAEVDAFYHAALEAGGKDYGAPGV
                     RAHYHPNYYGAFVLDPDGHDIEAVFHG"
     gene            1346..1585
                     /locus_tag="VLJ38_21845"
     CDS             1346..1585
                     /locus_tag="VLJ38_21845"
                     /inference="COORDINATES: protein motif:HMM:TIGR00251.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HSU42246.1"
                     /translation="MSADLRIKVRVKPRASKSRVLGMKGDALEVAVAAPPVDGAANLE
                     LVRTLAEHYGVAKSAVEIVSGLGGRNKIVRIAGAG"
     gene            complement(1604..>2236)
                     /locus_tag="VLJ38_21850"
     CDS             complement(1604..>2236)
                     /locus_tag="VLJ38_21850"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSU42247.1"
                     /translation="PLSALLRPGILSRAVRAWLLGVFKLGTYWSCYTWLPSILLTRMH
                     QSVGRSLTWIITAQIGQFIGMLTFGPFADTFGRRKAFTLFSLLTAAALAPLAFAWRTL
                     SAEPALFWSVMLLLGFGSGCTAGFGALLAELFPTELRGLGMGTTYNLARTVQLWAAVL
                     VGWAFDHAGLPGALGVPLTLALATASWVWVLPETRGIPLPVLRDFDSQPP"
BASE COUNT          404 a          693 c          770 g          369 t
ORIGIN      
        1 aaccatttgt ccaccaggta ttgggcgtac gggcggtcgt gctcgcacag cttcttgacg
       61 acgggcccgc cgatttgggc gtgacgcgct tcgtccgttt ggatgctctg caccatcttt
      121 tcgaacatgc gatcgcccac cgcgtgcgcg acggccgaga gcgcgacgaa ctgcaggttc
      181 gtaaagccgg tctcgaacac gaagtgcgtc gcgacggcga attccacggg attggacacg
      241 agcagcagct cgtcgacgaa gtgacgcgcg gcgacggcga cccactcgtt cgtgtggaac
      301 aagcggtgcg tccagtcgaa ctgcggatcc cacgccacga ggtcgtgcag caccgtgagg
      361 ggaatttggg tatggcggag ctcgtcgagc gcgccgagcg tcgccatggt gcgccaggcg
      421 ccgtcacgcc cgaagcgcgc ggcccgtagg tttccgacga cggcggcgaa ctcggcgagt
      481 ggcagcgtgg cggcgtggag cttcaacgcg ctgagccagg cgcgatcgtg gcgttcgaaa
      541 tcggcgacgc gcccgacggc gtcgcgcacg gcgtgcaccg ccgcttcttt ttcgtgctgc
      601 gtcgcgacgt actcggcaaa gctcgtacgg tacggctcgt cccagtcact ccactcggcc
      661 tgctcgagcc acggacggcc gctcatcgcc tcgggaaaca cgtcgcgctc gctgacgtag
      721 ctgtacttcc agtccagttt tctggcgaga tcgagccact cgtcacgctt gagcaacatc
      781 tgctgtcgcc ttcgatccgc cctgttcgca gccaaagttt ggcgtggcgc gtgcgaggaa
      841 ggctagcgca ggctggtgct ttcgaccatg ggcccctagg ctttctccgc ctggtgccga
      901 cagtcctact tgcgtcaagt ttctgacacc gcctacaagg acacacatgg cgatcctcga
      961 tcatgtcacg ctcactgtca gtgattacgc acggtccaaa gccttctacg agaaggcgct
     1021 cgcgccgctc ggcatcaagc tcatgatgga cttcggtcaa gcgtgcggct tcggccgcga
     1081 taagcccgag ctctggctcg gcgccggtcc gtcgagcttt cagaaacccg agcagctgcg
     1141 cgtcatcacg ccgatgcacc tcgccttttc cgcgacgagt cgtgcagagg tcgacgcgtt
     1201 ctatcacgct gcgctcgagg cgggcggcaa agactacggc gctccgggcg tgcgcgcgca
     1261 ctaccacccg aactactacg gcgccttcgt gctcgatccc gacggccacg acatcgaggc
     1321 cgtttttcac gggtaatgag cgcccgtgtc cgctgatctg cggatcaagg ttcgggtgaa
     1381 gccgcgtgcg tccaagagcc gagtgctcgg catgaaaggc gacgcgctcg aggtggccgt
     1441 cgctgctcct ccagtcgacg gcgccgccaa tctcgagctc gtccggacgc tggccgaaca
     1501 ctacggtgtg gcgaagagcg ccgtcgagat tgtttcgggc ctcggcggta ggaacaagat
     1561 cgtacggatt gccggcgccg gctagcagat ccgggttgcg gtactacgga ggttgcgagt
     1621 cgaagtcgcg caggaccggc agcggaatgc cgcgcgtttc gggcaggacc cagacccagg
     1681 atgccgtggc gagcgccagt gtgaggggca cgccgagcgc gccgggaagt ccggcgtgat
     1741 cgaaggccca gccgacgagt acggcggccc agagctgtac ggttcgggcg agattataag
     1801 tagtacccat gccgagaccg cggagctcgg tggggaagag ctcggcgagc aaggcgccga
     1861 agccggcggt gcaaccggag ccgaaaccga gcaggagcat cacgctccag aaaagcgcgg
     1921 gctcggcgga gagggtgcgc caagcgaacg cgagcggggc gagcgcggcc gccgtgagga
     1981 gtgagaacag cgtgaacgcc ttacggcgac caaacgtgtc ggcgaagggc ccgaaggtga
     2041 gcatgccgat gaattgtccg atttgtgccg tgatgatcca cgtgaggctg cgacccacgg
     2101 actggtgcat gcgcgtgagc aggatcgagg gcagccacgt gtagcagctc caataggtgc
     2161 cgagcttgaa gacgccgagc agccaggcgc gtacggcgcg tgaaaggatg ccgggacgga
     2221 gcagggccga gagtgg
//
LOCUS       DATIML010001266         2866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1424621, whole genome shotgun sequence.
ACCESSION   DATIML010001266 DATIML010000000
VERSION     DATIML010001266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424621"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..588)
                     /locus_tag="VLJ38_21855"
     CDS             complement(<1..588)
                     /locus_tag="VLJ38_21855"
                     /inference="COORDINATES: protein motif:HMM:NF018770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1365 domain-containing protein"
                     /protein_id="HSU42248.1"
                     /translation="MTASALYCGRLAHVRRRGGVRAFEHELYMLYLDLDELGTLELTP
                     LLGVEAFGLLSFRRRDYFGDSQRPLKAAVLDEVERVLGERPRGPVRLLTQVRSLGVAF
                     NPVSFYYCFGEDGVTLRAVLAEITNTPWGERHAYVVAAGAGGAGGEFAKRFHVSPFLP
                     MDQAYAWRFSLPGSALAVEMQNHERGSETFRARLAL"
     gene            complement(585..1835)
                     /locus_tag="VLJ38_21860"
     CDS             complement(585..1835)
                     /locus_tag="VLJ38_21860"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU42249.1"
                     /translation="MKIAVVGAGVTGLVAAYRLGRTHDVRLFESEARLGGHANTVEVR
                     DHGRTLALDTGFLVFNAQTYPNFVGLLAELGVPSAPSRMSFSVRSEARDFEYAGTSLD
                     TLYAQRRHLASPGFHRMVWDILRFYREAPALLDAERDVPLRSWLEERRFSRQFSDDHL
                     LPMLRAVWSARSDVAEDFPARFLVRFFKNHGFLSVDQPPWLTIPGGSQSYVEAIERRL
                     RAVVRRGARVERVIRHGSGISVATAAGSEHFDHVVLACHADQALALVAEPSALERELL
                     SAFPYQPNVAVLHCDERLMPRRRRVWSSWNVHLDDEGVDGACITYWLNSLQSLPTTKN
                     YFVTLNRSHAIDPAKVLARFDYAHPVFTLASVAAQARHDELIDHRGISYAGAYFRNGF
                     HEDGVVSALRVCERLASSAMGTAA"
     gene            complement(1832..>2866)
                     /locus_tag="VLJ38_21865"
     CDS             complement(1832..>2866)
                     /locus_tag="VLJ38_21865"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HSU42250.1"
                     /translation="SMRLLERNLVPDWLIRRGIRKLLAQRLREENMGNPEAQQKRLMD
                     LIARLKASPIAVNTIDANIQHYEVPTEFYLNVLGPNLKYSSCYYESPEESLEVAEERM
                     LALTGERARLADGQRVLELGCGWGSLTLWMARKFPNSAITGVSNSSSQRALILRRARE
                     LALDNVSIVTADINRFEPASAFDRVVSVEMFEHVRNWEALLGRVRGWLAPEGLVFLHF
                     FAHRSFSYPFEAASDDDWMGKHFFTGGMMPSSGILSELSMPFDIAGEWQVGGEHYART
                     AEAWLANLDRNATALTGLFERDLGEPAAARQIQRWRLFFLACAELFGFEGGREWLVQH
                     ALLRPKAGIL"
BASE COUNT          505 a          965 c          959 g          437 t
ORIGIN      
        1 aagcgcgagg cgagcgcgaa acgtctcgct tcctcgctcg tggttctgca tctcgaccgc
       61 gagcgccgag cctggaagcg agaagcgcca agcgtaggct tggtccatcg gcaagaaggg
      121 cgagacgtgg aaacgcttcg cgaattcgcc gccagcgccg ccggcgcctg cggcgacgac
      181 gtaggcgtgg cgctcgcccc agggcgtgtt cgtgatctcc gcgaggacgg cccgtagcgt
      241 gacgccgtct tccccgaagc agtaataaaa gctcaccggg ttgaaggcca cgccgaggga
      301 gcgcacctgc gtgagcaaac gcacgggccc gcgcggacgc tcgccgagca cgcgttcgac
      361 ttcgtcgagc accgcggctt tgaggggccg ctgcgaatcg ccgaagtagt cgcgccggcg
      421 aaacgacaac aggccgaacg cttcgacgcc gagcagcggt gtaagctcga gcgtgccgag
      481 ctcgtcgaga tcgagataga gcatgtagag ctcgtgctcg aacgcgcgca cgccgcctcg
      541 ccgtcgcacg tgcgcgagcc gcccgcagta aagtgcgctc gccgtcacgc tgcagtcccc
      601 atggcgctcg aggcgaggcg ctcgcacact ctaagcgcgc tcacgacccc gtcctcgtgg
      661 aagccgttgc ggaagtacgc tcccgcatac gaaatgccgc ggtgatcgat gagctcgtcg
      721 tgtcgagcct gcgcggcgac gctcgcgagc gtgaacacgg ggtgcgcgta gtcgaagcgc
      781 gcgagaacct tggccgggtc gatcgcgtgg ctgcgattca gcgtgacgaa gtagttcttg
      841 gtcgtcggta gcgactgcag cgaattcagc caatacgtga tgcacgcgcc gtcgacgccc
      901 tcgtcgtcga ggtgcacgtt ccacgacgac cagacccggc gccgccgcgg catcaggcgc
      961 tcgtcgcagt gcagcaccgc gacgttgggc tgatacggaa acgcggacaa gagctcacgc
     1021 tcgagcgccg acggctcggc cacgagcgcg agtgcctgat cggcgtggca ggcgagcacg
     1081 acgtggtcga agtgttccga gccggcggcg gtcgcgacgc tgatgccgga gccgtgtcgg
     1141 atgacgcgct ccacgcgcgc gccgcgccgc accactgcgc gcagccgccg ctcgatggct
     1201 tcgacgtagc tctgcgagcc gcccggaatc gtgagccagg gcggctggtc caccgagaga
     1261 aatccatgat ttttgaagaa gcgcacgagg aagcgcgccg gaaagtcttc ggctacgtcg
     1321 ctgcgcgccg accacaccgc gcgcagcatc ggcagcaggt ggtcgtcgct gaactgccgc
     1381 gaaaagcgcc gctcctcgag ccagctccgc agcggcacgt cgcgctccgc gtcgagcagc
     1441 gccggcgctt cgcgatagaa acgtaggatg tcccacacca tgcgatgaaa cccggggctc
     1501 gcgaggtgac ggcgctgggc gtacagcgtg tcgaggctcg tgccggcgta ttcgaagtct
     1561 cgcgcctcgc tgcgcacgct gaagctcatg cggctcggag ccgacggcac cccgagctcg
     1621 gcgagcaagc cgacgaagtt cggatacgtc tgcgcattga agaccaaaaa accggtatcg
     1681 agcgcgaggg ttcgcccatg gtcgcggacc tcgaccgtgt tggcgtggcc gccgagccgt
     1741 gcctcgctct cgaacagcct cacgtcgtgg gtgcgtccga gccgataagc ggcgacgagc
     1801 cccgtcacgc ccgctcccac gaccgcgatc ttcacaggat ccctgccttc ggacgcagca
     1861 acgcgtgctg cacgagccac tcgcgaccgc cctcgaagcc gaagagctcg gcgcacgcga
     1921 gaaagaacag ccgccagcgc tggatctgcc gcgccgccgc gggctcgccg aggtctcgct
     1981 cgaatagccc cgtaagtgcc gtggcattgc gatccagatt agcgagccag gcttcggccg
     2041 ttcgcgcgta gtgctcgccc ccgacctgcc actcgccggc gatgtcgaag ggcatgctga
     2101 gctcggacag aattccgctc gacggcatca tgccgcccgt gaagaagtgc ttgcccatcc
     2161 agtcgtcgtc cgacgccgcc tcgaacggat acgagaagct tcgatgcgcg aagaagtgca
     2221 agaacacgag tccctcgggc gcgagccagc cgcgaacacg cccgagcagt gcctcccagt
     2281 tgcggacgtg ctcgaacatt tcgaccgaca cgacacgatc gaacgcgctg gccggctcga
     2341 agcgattgat gtcggccgtc acgatcgaga cgttgtcgag cgcgagctcc cgggcgcggc
     2401 gcaggatgag tgcgcgctgc gagctcgagt tggagacgcc ggtgatcgcg ctgttcggga
     2461 acttccgcgc catccacagc gtgaggcttc cccagccgca gccgagctcg agaacgcgct
     2521 gcccgtcggc caggcgcgcg cgctcgcccg tgagcgcgag catgcgctcc tcggccacct
     2581 ccagcgactc ctcgggcgat tcgtagtagc agctggaata cttcaggttc gggccgagca
     2641 cgttgagata gaactccgtc ggcacctcgt agtgctggat gttcgcgtcg atggtgttga
     2701 ccgcgatcgg gctcgctttc aacctcgcga tcaggtccat cagccgcttc tgctgcgctt
     2761 cggggttgcc catgttttct tcgcgcaggc gctgcgcgag caacttgcgg atgccgcgac
     2821 ggatgagcca gtccggcacc agattccgtt ccagcagacg catgga
//
LOCUS       DATIML010001267        10051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3732887, whole genome shotgun sequence.
ACCESSION   DATIML010001267 DATIML010000000
VERSION     DATIML010001267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 10051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10051
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3732887"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1810)
                     /locus_tag="VLJ38_21870"
     CDS             complement(98..1810)
                     /locus_tag="VLJ38_21870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42251.1"
                     /translation="MARARQIALVLGLALETLGCDIVQGFQHAGDALFPPVETYLDVP
                     GYRMTTGHFRYLDMITSSEPYILARSATDGDDALFVMHFNAPTPCAIPNAARYWTGAG
                     ADTKRTYVAFFDASDSGILHFSDLDCTPLDFTLEHANLPIDHSPTGLVLQVGPDLFDV
                     NPAAGTTKLLASSLEAFDAQHHLVRAGGRIGVFDSDWALVRWVGDGVVDWASAFGTTF
                     FEDKGGIQRLTITDANGTRTASTLTLDSSACDLTILPQTPHLQLVGYHAPCAETTATV
                     WDAQTHQASALPFATNLDHLKLFGSSTDSHPDFKTDTYFALYLADLDASGDTGTLHLR
                     TLDGTDLVVGGGAALERAELARNANDSDYSGGFALLDVDGPTGRFVRFDFDGNVSDIA
                     TGVVRRPAEPSWTRLVIAVNDAVNDLAEVVNGQAVTVAHDVPNNRYAYSNRFEDNPLS
                     GRLAWFQDLHGDLGTLSLASPDPSSGMIDDQGHEPLYRATPVAHDVYMNGHGFMVDLP
                     GFAYFAAWDAKNGTGRLDYSNEELRFSATVSEGVSDYLQPGSGLLYTVPFGSAAGIWL
                     ARGK"
     gene            complement(1789..3558)
                     /locus_tag="VLJ38_21875"
     CDS             complement(1789..3558)
                     /locus_tag="VLJ38_21875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42252.1"
                     /translation="MRSRALPRRRPIAAALAFGLALGFGAVGCDVVQGFKHAGDALFP
                     SVKTYLDAPGYKLVSGGYRDLVLLTSSELFVLARSAKDDDQTLYSIRYAVPTPCSIPI
                     VGRYWAGGSVDIGQAWIAYLHDGGIRGTLSFSDTGCHVSPISLPDAELPYARVTPRNS
                     DGELQTDRLLLLVRSAGRLLLVDPASSDEPKLLVEPADGLVMGVGKSNLNLVLSNGQL
                     LVFDADWNYLTTFADGVVGLDQLGDAVYFEDNNGIQRATPTIRGGMPAVDVELIAADG
                     CELAFPGASHHWIGFFSPCAEQTLALYDESTKELTRPELSVDDPRALVLQPDPTATGT
                     PVLDLDQVWAFFLRDIDYGNGTGTLVARSPQGNELILGANAALERTTLDKSGDYGLAL
                     VDFNGGVGSFVRWEPDGSITPLAANVLRDGTGQSFADLMIDWNGTAGTLAQVNGGEVY
                     PVLERVPYRGFAYQDLHKRQALFSDYDGENGTLSIGELACAPGTTHCEREYYVPHAIA
                     RGVHHPSHAFFDDTTDFLPGIGFLDEYDVERGTGRFQYRNLELGFTSMVSQGVSDFVF
                     AGNGMLYAVPHGEGAGIWLARAK"
     gene            3619..5901
                     /locus_tag="VLJ38_21880"
     CDS             3619..5901
                     /locus_tag="VLJ38_21880"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSU42253.1"
                     /translation="MVVGRCSLACLVVAAVCANVAPAAAAESPSGPNGTARPADRAEI
                     QPPVAVTTPVPYPAGETRSASVVLELEVDARGAVTAARAVTGDSPFSGVAVEAARSWT
                     FIPAKRGAEPVRSRFRFSIQFEPPPPELPVATPPPSAKAAPRPPGPPPILEVIVQGER
                     PPRPPPGTVTITREEAEALPGTFGDPLRAIEAQPGVVPIVSGLPSFFVRGAPPGNVGY
                     FIDGVDVPLLYHAFFGPSVIHPGLIEDVQLHKGAVPVDFGRFAGPVVSATLTPLEHRF
                     TGEANVRLIDAGGLVEAPFGACPDAGKPNCSLGSARVGGRYAYTGLILSQLSDAKLNY
                     WDYQGQASISLGRHDELGVLAFGAYDYFDAGASSDQGGGKVRFHRLDLRWDHHAGHTH
                     LRVALTGGYDSTGGVEATTSIVRDRSARLRSELVSELSDAVTLHAGIDGRLDDFSLET
                     DPLLLNFADYSRLFPARTETTVGGYVSVELRPTRRITVVPGIRSDLYWDRGQTAAGVD
                     PRLSAAFALTEKLTVETSFGMSHQRPNFVPNVPGAQVADLGGGLQEAIVFDSGVKWKL
                     PSDITAKATVYRAGYFNALDPLGGKRDFSIDREVLDQRSTIASAGLELSLARPLTRKL
                     GGFLAYTLSHTTESFGTQSNVSGFDRPHVFQAALGYDFGRGWTTGARAVVYSGVPELN
                     LQGSPHFSGDRRGRPYFRLDVKAEKRWRLGARAWWSVVFEMLNATGTSEVVRLDCGER
                     CAERSAGPVVLPSLGVQAGF"
     gene            complement(6227..8536)
                     /locus_tag="VLJ38_21885"
     CDS             complement(6227..8536)
                     /locus_tag="VLJ38_21885"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HSU42254.1"
                     /translation="MSAGSPSLNQAQREAVATLSGPLLVLAGAGTGKTRVITYRIAAL
                     IRTGITPHRILAVTFTNKAAREMRERALHLLGKRPRNVKPPEISTFHSLCVRILRRHA
                     RLLGYPEEFAIYDRGDQETLARGALRDVRVGHEKLRPGDLLHLIGGWKNKGVRPEQAE
                     QSDNDKEQLAALAYARYQQSLKASGAMDFDDLLLKTEELFAKHPEARFAEASRFDHVL
                     VDEYQDTNDLQYRILRAFADRHRNLCVVGDDDQSIYGWRGAEVAHILGFQRDWPEAKV
                     IRLEENYRSVEPILKLTNTLIAHNGARHPKTLRATREGGVDPRVLRFEDEVAESEGIV
                     REIDTRLRAEPGTRIVPSDIAILFRTNEQPRAFELELRRAGIPYRLVGGLSFYDRREV
                     KDILSFLRVLANPNDEVSLLRVINLPPRGIGAGSIETLIKVAVERGVPLWQVLPEAPQ
                     NGDLPHGVGERIDGFRKLMESFRARLGLEPLFKLTTELLATVDYKSEIRRVHREPADA
                     EARFAAVEEFVNSIALYEQRNDDASLLGFLEESTLSGRENEKDDERKSHAMTLMTLHS
                     AKGLEFPHVYLVGLEEGLLPHGRSIIEGRGIEEERRLCYVGVTRAQTTLTLSFAKGRT
                     KWGKSRPSIPSRFLLEMRGETERARRAAEAAEALFRTGHAGDGDDAAAPKKDAPKGKK
                     SRGKANAAGAQSSKARSSASKRASSAASPALAVAPPGAAGAGAPSERRRQRLSMTNPP
                     APAPAIPSTKSVANDLSGLPGGTARIRSP"
     gene            8733..9506
                     /locus_tag="VLJ38_21890"
     CDS             8733..9506
                     /locus_tag="VLJ38_21890"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSU42255.1"
                     /translation="MTASAVRLHVERQGDGPPLVLAHGFGGSARNFRLQLRALAPHAT
                     VVAYDARGHARSEAPPDPDAYTFERLVDDFERVASEAGERVVAAGVSLGAMTALGFAA
                     RRPERVRGLLLASLPGTDEPRLRWARDFAAAIERDGLDAAGAAFVWGERSRFDPAGAK
                     LIRQGILEHPPHALMHILRATLALLPDVRSLAAPLVNAAFPVTIVAGALDEPALAPSQ
                     ALAELLPRARLVVVPDAGHVVNLVAPAVFNAELTKLVSS"
     gene            complement(9526..>10051)
                     /locus_tag="VLJ38_21895"
     CDS             complement(9526..>10051)
                     /locus_tag="VLJ38_21895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42256.1"
                     /translation="AARLDANTLSRPGPFALELYPEPGTPKVLEKYPLAANRLLARML
                     ESGLITRARQVGAVYTLELTPTALARQDLTLPFGRCLDATVALGPGASGVELRLVRKD
                     GTELALGRGDSTTSVHACAVDATAGSAPELVAELRVAAGTTTALLTAHQTDPRGTIPA
                     SDPRAVAPPAPRPR"
BASE COUNT         1531 a         3309 c         3532 g         1679 t
ORIGIN      
        1 ccgccgaaac ggcgcgcggc caagcgcacg gcaaggtgcg cgacaagttc acgcgggtcg
       61 aggacatgct cgcggcagcg attgcgtgag cctcgcgtta tttgccgcgc gcgagccaaa
      121 tgcccgcggc ggagccgaac ggcaccgtat aaagcagacc ggagccgggc tggaggtagt
      181 cgctcacgcc ttcgctcacc gtcgccgaaa accggagctc ctcgttgctg tagtcgaggc
      241 ggccggtgcc gttcttcgcg tcccaagcgg cgaagtaggc gaacccgggt aaatcgacca
      301 tgaaaccgtg gccgttcatg tagacgtcgt gcgcgaccgg cgtcgcgcga tagagcggct
      361 cgtgaccctg atcgtcgatc atgcccgagc tcggatcggg tgacgcgagc gacagcgtgc
      421 ccaaatcgcc gtggagatct tggaaccacg cgagccggcc cgagagtgga ttgtcctcga
      481 agcggttcga gtaggcatag cgattgttcg gcacgtcgtg cgcgaccgta accgcttggc
      541 cgttcaccac ctcggcgaga tcgttcacgg cgtcgttcac ggcgatcacg agacgcgtcc
      601 aggagggctc ggccggtcgc cggacgacgc cggtcgcgat gtcactcacg ttgccgtcga
      661 agtcgaagcg cacgaagcga ccggttgggc catcgacgtc gaggagcgca aaaccgccgc
      721 tgtagtcgct atcgttcgca ttccgcgcga gctcggcgcg ctcgagcgcg gcgcctccgc
      781 cgacgacgag gtccgtgccg tcgagcgtac gcaggtgcag cgtgcccgtg tccccgctcg
      841 cgtccaaatc cgccaggtag agcgcaaaat acgtgtccgt cttgaaatcc ggatgactgt
      901 ccgtcgagga gccgaagagc ttcagatgat cgaggttcgt cgcaaacggc aacgcgctcg
      961 cttgatgtgt ctgcgcgtcc cacaccgtcg cggtcgtctc ggcgcagggc gcgtggtagc
     1021 cgacgagctg aaggtgcggt gtctgcggca aaatcgtgag atcgcaggcg ctgctatcga
     1081 gcgtgagcgt ggaagccgtg cgggtgccgt tcgcgtcggt gatcgtgagg cgctgaatgc
     1141 cgcccttgtc ctcgaagaac gtcgtgccga aagcggacgc ccagtcgacg accccgtcgc
     1201 cgacccaacg cacgagcgcc caatcggaat cgaacacgcc gatacggccc cccgcgcgta
     1261 cgaggtggtg ttgcgcgtcg aaggcttcga gcgagcttgc caagagcttc gtggtccccg
     1321 cggccggatt cacgtcgaag aggtcgggac cgacctggag cacgagcccc gtggggctgt
     1381 ggtcgatggg caggttcgcg tgctcgagcg tgaagtcgag cggcgtgcag tcgagatccg
     1441 aaaaatgcaa aatgccggag tcgctcgcgt cgaagaacgc gacgtacgtg cgcttcgtgt
     1501 ccgccccggc gcctgtccag tagcgcgccg cgttcgggat cgcgcagggc gtgggggcgt
     1561 tgaaatgcat cacgaagagc gcgtcgtcgc cgtccgtggc cgagcgcgcg aggatgtacg
     1621 gttcgctgct cgtgatcatg tcgaggtaac gaaagtgtcc agtcgtcatg cggtacccgg
     1681 gcacgtcgag gtacgtctcg acgggcggga agagcgcgtc gcccgcatgc tggaagccct
     1741 gcacgatgtc gcagccgagc gtctcgaggg cgagaccgag cacgagcgct atttggcgcg
     1801 cgcgagccaa atgcctgctc cctcgccgtg gggcacggcg taaagcatgc cgttaccggc
     1861 gaaaacgaag tccgagacgc cttgactcac catgctcgtg aaaccgagct cgaggtttcg
     1921 atactgaaag cgccccgtcc cgcgctcgac gtcgtactcg tcgagaaagc cgatacccgg
     1981 cagaaagtcg gtagtgtcat cgaagaacgc gtggctcgga tggtggacgc cgcgcgcgat
     2041 cgcgtggggc acgtagtact cgcgctcgca gtgcgtcgtg ccgggcgcgc aagcaagctc
     2101 accgatcgac agcgtgccgt tctcgccgtc gtagtcgctg aacaaagcct ggcgcttgtg
     2161 caaatcctgg tacgcgaagc cgcgataggg gacgcgctcg agcaccggat agacctcgcc
     2221 gccgttgact tgggcgagcg tccccgccgt gccgttccag tcgatcatga gatcggcaaa
     2281 gctttgaccc gtgccgtcgc gcaagacgtt ggccgcgagc ggcgtgatcg agccgtccgg
     2341 ttcccagcgt acgaagctgc cgacgccgcc gttgaagtcg accagcgcga ggccgtaatc
     2401 gccgctctta tcgagcgtcg tccgttcgag tgcggcgttc gcgccgagga tgagctcgtt
     2461 gccctgcggt gagcgagcga cgagcgtccc cgtgccgttc ccgtagtcga tgtcacgtag
     2521 gaagaacgcc cagacttggt cgaggtcgag caccggcgtc cccgtcgcgg tcggatccgg
     2581 ctgcaggacg agggcccggg gatcgtcgac gctgagctcg gggcgcgtga gctctttagt
     2641 ggactcgtcg tagagagcaa gcgtttgctc cgcgcagggc gagaaaaagc cgatccagtg
     2701 gtgagacgcg ccagggaatg cgagctcgca gccgtccgca gcgatcagct cgacgtcgac
     2761 ggccggcatg ccgccacgga tggtcggtgt tgcgcgctgg atcccgttat tgtcctcgaa
     2821 gtaaaccgcg tccccgagct ggtccagccc gaccacgccg tcggcgaatg tcgtcagata
     2881 attccaatcc gcgtcgaaca cgagcagctg gccgttactg aggaccaggt tcaggttcga
     2941 cttcccgacg cccatgacga gtccgtcggc cggctcgacc aggagcttcg gctcgtcgga
     3001 tgaggcggga tccaccagca gcaggcggcc cgcagagcga accaacaaga gcagccgatc
     3061 ggtctggagc tccccgtccg aattgcgcgg cgtcacgcgc gcgtaaggta gctccgcgtc
     3121 gggtaggcta ataggcgaga cgtggcagcc ggtgtccgag aagctcagcg tgccgcggat
     3181 gcctccgtcg tgcaggtacg cgatccacgc ctgtccgatg tcgacgctgc cacccgccca
     3241 gtaacgtccg acgatcggaa tcgagcaggg cgtcgggacg gcgtagcgga tcgagtagag
     3301 ggtttggtcg tcgtccttcg cgctgcgagc gagcacgaac agctccgagg aagtgagcag
     3361 caccagatcg cggtagccgc ccgagacgag cttgtaccca ggcgcatcga ggtacgtctt
     3421 caccgagggg aagagcgcgt cgccggcgtg tttgaagccc tgcaccacgt cgcagccgac
     3481 ggctccgaag ccgagcgcga gaccgaacgc gagcgccgcc gcgatgggtc gcctgcgcgg
     3541 cagtgctcgg gagcgcatgg tacgacgcat tttctagcac ctgatcgctc ggtcggggac
     3601 gcgctacgct cgaagctcat ggtggtcggg cgatgttcgc tggcgtgcct cgtcgtggcc
     3661 gcggtctgcg caaacgttgc acctgccgcg gcggcggagt cgccctcggg gccgaacggc
     3721 acggcacgcc ctgccgatcg ggcggagatc cagccgccag tcgccgtgac gacgccggtg
     3781 ccgtaccccg ccggcgagac acgcagtgcc agcgtcgtcc tcgaactaga ggtcgacgcg
     3841 cgcggcgctg tcacggccgc gcgcgccgtg acgggcgact ccccattttc gggcgtcgcc
     3901 gtcgaggctg cgcggagctg gacgttcatc cccgccaagc gcggcgcgga gcccgtgcgt
     3961 tcgcgctttc gtttcagcat ccagttcgaa ccgccgccgc cggagctacc cgtcgccacg
     4021 cctccgccga gcgcgaaagc ggcgccacgt ccgccgggcc cgccgccgat cctcgaggtc
     4081 atcgtgcagg gcgagcgacc gccgaggccg ccgcccggta ccgtgacgat cacgcgcgaa
     4141 gaagcggagg cgcttccggg caccttcggc gatccgctgc gggcgatcga agcgcagccc
     4201 ggcgtcgtgc cgatcgtctc ggggttgccg tcatttttcg tgcgcggcgc cccgcccggt
     4261 aacgtcggct acttcatcga cggggtcgac gtgccgctcc tctatcacgc gttcttcggg
     4321 ccctcggtga ttcacccggg gctgattgaa gacgtgcagc tccacaaggg cgcagtgccg
     4381 gtagacttcg gtcgctttgc aggtcccgtc gtctcggcga cgctgacgcc gttggaacat
     4441 cgcttcaccg gtgaagcgaa tgtgcgcttg atcgatgcgg gcggtctcgt cgaagcgccc
     4501 ttcggtgcgt gtccggacgc gggcaagccg aactgttcgc tcggcagcgc gcgcgtcggc
     4561 ggtcgctatg cgtacacggg gctcatcctt tcgcagctca gcgacgccaa gctcaactac
     4621 tgggactacc aggggcaagc gagcatctcg ctcggtcgcc acgacgagct cggggtgctc
     4681 gcgttcggcg cttacgacta cttcgacgcg ggtgcgagca gcgatcaggg cggcggtaaa
     4741 gtgcgctttc accgcctgga tctgcgctgg gatcaccatg ccggtcacac gcacctgcgc
     4801 gtcgcgctca cgggcggcta cgactcgacg ggcggcgtcg aggcgacgac gagcatcgtg
     4861 cgcgatcggt cggcgcgcct gcgcagcgag ctcgtttccg agctctccga cgcggtcacg
     4921 ctgcatgcgg gcatcgacgg ccgcctcgac gacttttcgc tcgaaaccga cccgctgctc
     4981 ttgaatttcg ccgactactc gcggctgttc cctgcgcgca cggagacgac cgtcggcggc
     5041 tacgtctccg tcgagctccg cccgacccgg cgcatcacgg tggtgcccgg tattcgcagc
     5101 gatttgtatt gggatcgcgg gcaaacggcg gctggcgtcg atccgcgcct ctcggcggcg
     5161 tttgcgctga ccgagaaact cacggtcgaa acgtccttcg gcatgtcgca ccagcgcccg
     5221 aatttcgtgc cgaacgtgcc gggggcgcag gtcgccgatc tcggcggcgg gctgcaagag
     5281 gccatcgtgt tcgactcggg cgtgaagtgg aagttaccga gcgacatcac ggccaaagcg
     5341 accgtatacc gcgcggggta tttcaacgcg ctcgatcccc tgggcggcaa gcgcgacttc
     5401 agcatcgatc gggaagtgct cgatcaacgc tcgacgatcg cgtccgctgg actcgagctc
     5461 tcgctcgcgc gcccactcac gcgcaaactc ggcggtttct tggcgtacac cctgtcgcac
     5521 accaccgaat cgttcggcac gcagtcgaac gtgtcgggct tcgatcgccc gcacgtgttt
     5581 caggctgcgc tcggctacga ttttggccgt gggtggacga cgggagcgcg cgccgtcgtc
     5641 tattcgggtg tgccggagct gaacctccag ggctcgccgc atttttccgg cgaccgccgc
     5701 ggccggccgt actttcgcct cgacgtgaag gcggaaaagc gctggcgcct cggcgcgcgg
     5761 gcctggtggt ccgtcgtttt cgagatgctg aacgcgacgg ggacgagcga ggtcgtgcgg
     5821 ctcgactgcg gtgaacgctg cgcggagcgc agcgcgggtc ccgtggtctt gccgagtttg
     5881 ggcgttcagg cgggcttttg aacgcgtgct atgctccgcg cgtgatctcg cgctcgggcc
     5941 tcgtgttttc cgcgttgttc gcggccgctc tcgcggcgcc gtccgtcgcc ctcgcgcaaa
     6001 acgatcccga ggcaccgccc gacgatccgg ccaagtacgc cgaggagctc cagggctacg
     6061 tgccgggcgc ttctgcgctc gagggtcgca tcatggcgcc ctgttgctgg acgcaaacca
     6121 tcgacatcca cggctcggag atcgccaacg atctgcgccg tgaaatcagg aagcgcctgc
     6181 gcgcgggcga gagcgccgac acgattcagg cgtcgctcgt caatcgctac ggcgagcgga
     6241 tcctcgcggt gcctccgggt agcccgctca aatcgttggc gacgcttttg gtgctcggta
     6301 tggccggcgc cggggcaggg gggttcgtca tgctcaagcg ctggcggcgc cgttcgctcg
     6361 gcgcgcccgc gccagccgcg ccgggcggag ccaccgccaa agccggcgag gccgcgctcg
     6421 acgcgcgctt ggacgccgag ctccgcgctt tggacgattg agcgccggcg gcgttcgcct
     6481 tgccgcgcga ttttttgcct ttcggggcgt ccttcttggg cgcggctgcg tcgtcgccgt
     6541 cgccggcgtg acccgtgcgg aagagcgcct ccgcagcctc cgcggcacgg cgcgcgcgct
     6601 cggtctcgcc gcgcatctcg agcaagaagc ggctcgggat cgagggccgc gatttgcccc
     6661 atttggtacg gcccttggcg aagctcaagg tgagcgtcgt ctgcgcacgt gtgacgccga
     6721 cgtaacagag ccgccgctcc tcttcgatgc cgcggccttc gatgatcgag cggccgtgcg
     6781 gtaacaggcc ctcctcgagg cccaccaggt aaacgtgggg aaattcgagc cccttggcgc
     6841 tgtgcagcgt catcagcgtc atggcgtgcg atttgcgctc gtcgtccttt tcgttctcgc
     6901 gtccggagag cgtgctctct tcgagaaaac cgagcagcga cgcgtcgtcg ttgcgctgct
     6961 cgtagagcgc gatcgagttg acgaactctt cgacggcggc aaagcgcgcc tcggcgtcgg
     7021 ccggttcgcg gtgcacgcgc cggatttcgc tcttgtagtc gaccgtcgcg agcagctccg
     7081 tcgtgagctt gaagagcggt tcgaggccga gccgcgcgcg gaagctctcc atcagcttgc
     7141 ggaagccgtc gatgcgctcg ccgacgccgt gcggcaaatc gccgttttgc ggcgcttcgg
     7201 gcaagacttg ccagagcggc acgccgcgct ccaccgccac cttgatcagc gtctcgatgc
     7261 tgccggcgcc gatgccgcgc ggcggcaggt tgatcaccct gaggagtgac acttcgtcgt
     7321 tggggttcgc gagcacgcgc aggaatgaga ggatgtcctt gacctcgcgc cggtcgtaaa
     7381 acgagagacc gcccacgagc cggtacggaa tgcccgcgcg ccggagctcg agctcgaagg
     7441 cgcgcggctg ctcgttggtg cgaaacagga tcgcgatgtc gctcggcacg atgcgcgtgc
     7501 cgggctcggc gcgcagtcgc gtatcgattt cgcgcacgat gccctcggat tcggccactt
     7561 cgtcctcgaa gcggagcacg cgcggatcga cgccgccttc gcgcgtggcg cgcagcgtct
     7621 tagggtgccg ggcgccgttg tgcgcgatca gcgtgttcgt tagcttcagg atcggctcga
     7681 ccgagcggta gttctcctcg agccggatca ccttggcctc gggccaatcg cgctgaaagc
     7741 ccaggatgtg ggccacttcc gcgccgcgcc agccgtaaat cgattgatcg tcgtccccga
     7801 cgacgcagag gtttcggtgc cgatcggcga acgcgcgcaa gatccggtac tgaaggtcgt
     7861 tcgtgtcctg gtactcgtcg acgaggacgt gatcgaagcg cgacgcctcg gcgaagcgcg
     7921 cttcggggtg tttggcgaag agctcctcgg tcttgagcag gagatcgtcg aagtccatcg
     7981 cgccgctcgc cttgaggctc tgctggtaac gggcgtaggc gagcgcggcg agttgctctt
     8041 tgtcgttgtc ggactgctcg gcttgttcgg ggcgcacgcc cttgttcttc caaccgccga
     8101 tcaggtgcaa cagatcgccc gggcggagct tttcgtgccc gacccgcacg tcgcgcaggg
     8161 cgccgcgcgc gagcgtttct tggtcgccgc ggtcgtaaat cgcgaattct tcggggtagc
     8221 cgagcaggcg ggcgtggcgg cgcaggatgc gcacgcagag tgaatggaac gtggaaatct
     8281 cgggcggttt gacgttgcgc ggccgcttgc cgagcaggtg cagcgcgcgt tcgcgcatct
     8341 cacgggcggc cttgttggtg aaggtcacgg caaggatgcg gtgcggggtg atgccggtgc
     8401 ggatcagcgc ggcgatgcgg taggtgatga cgcgcgtctt gccggtgccg gcgcccgcca
     8461 gcacgagcag gggacccgag agtgtcgcga cggcctcacg ctgggcttga ttgagcgagg
     8521 gggagccagc cgacatgaaa cattgaccgc taccgcatca cggccgagcg accaagcgcg
     8581 aagtggaacg gcgccgcacg gcgccgctca cacctcgccg gacagcggtc gcccctaaaa
     8641 aatgctcaaa cccttgacac gactcacgct cgcgtttcgg gcgcccggag cgacgttcgg
     8701 cgccgcgccg atcccgcgct atcgtggcga gcgtgacagc atcagccgtg cgtctccacg
     8761 tcgaacgcca aggggacggc cccccgctcg tgctcgcgca cggtttcggc ggcagcgcgc
     8821 gcaatttccg gctccagctg cgagcgctcg cgcctcacgc cacggtggtc gcgtacgacg
     8881 cgcgcggcca cgctcgcagc gaagcgcccc cggaccccga cgcctacacg ttcgagcggc
     8941 tcgtcgatga cttcgagcgc gtcgcgagcg aagcgggcga gcgggtcgtc gcggccggcg
     9001 tcagcctcgg cgccatgacc gcgctcggtt tcgccgcgcg gcggcctgaa cgcgtgcgtg
     9061 gcctcctgct cgcgtcgctg cccggcaccg atgaaccgcg cttgcgctgg gcgcgtgatt
     9121 tcgcagcggc gatcgagcgc gacggtctcg acgcggcggg cgcggcgttc gtgtggggcg
     9181 agcgctcgcg cttcgatccc gcgggcgcaa agctgattcg gcaggggatc ctcgaacatc
     9241 cgccgcacgc gctgatgcac atcttgcggg cgacgctcgc gctgctgccc gacgtgcgct
     9301 cgctcgcggc gccgctcgtg aacgcggcct tcccggtgac gatcgtcgcg ggcgcgctcg
     9361 acgagcccgc gctcgcgccg tcccaggcgc tcgccgagct cttgccgcgc gcgcggctcg
     9421 tcgtcgtgcc cgacgcggga cacgtcgtga atctcgtcgc gccggccgtg ttcaacgccg
     9481 agctcacgaa actcgtgtcg agctgagccg agcggtagct ttccgtcagc gcggacgagg
     9541 cgcggggggc gcgacggcgc gtggatccga ggccggtatg gtgccgcgcg gatcagtttg
     9601 atgcgcggtg aggagcgccg tcgtcgtgcc cgctgccaca cggagctcgg cgacgagctc
     9661 tggggcgctg cccgccgtcg cgtcgacggc gcacgcgtgg acgctcgtcg tgctgtcgcc
     9721 gcggccgagg gcgagctcgg tgccgtcttt gcgcacgagg cggagctcga cgcccgacgc
     9781 gcctggaccg agcgcgaccg tcgcgtcgag gcagcggccg aacggcaacg tcaggtcttg
     9841 gcgcgcgagc gccgtgggag tgagctcgag cgtgtacacg gcgccgactt ggcgcgcgcg
     9901 cgtgatgagg ccgctctcca gcatgcgcgc gaggagtcgg ttggcggcga gcgggtactt
     9961 ttcgaggact ttcggcgtgc cgggctcggg gtagagctcg agcgcgaagg gaccagggcg
    10021 agacagcgtg ttcgcgtcga gccgcgcagc g
//
LOCUS       DATIML010001268         3923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3732893, whole genome shotgun sequence.
ACCESSION   DATIML010001268 DATIML010000000
VERSION     DATIML010001268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3923
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3732893"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VLJ38_21900"
     CDS             complement(<1..305)
                     /locus_tag="VLJ38_21900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42257.1"
                     /translation="MLAAIARQKRDVPGALKLLERARGIAEKSGNSVDEADIWHSQFE
                     VLRDSGDREGAGKALERALTRVIDATKQGRPGANQARAERLLAHVLEHYGDVAAMRRA
                     "
     gene            complement(333..1712)
                     /locus_tag="VLJ38_21905"
     CDS             complement(333..1712)
                     /locus_tag="VLJ38_21905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42258.1"
                     /translation="MQRAYAPSRQIPRHTGILSALLLGVTLAGCAGTQATAKPPKSAA
                     SDLGPITPVAVDDASFATSAYRVLVGADTGPKRASLLAGVVARQLERSRQRFDSDHPE
                     NGYTSLQGAFFLMRRGEFRREAFTHAAPALEQGAAVAARLGEEGYALALYSLLDGLLA
                     PGPEREDVETHLQAMASFHALTGASGPLVAAGSDARVAAQRALFDSSDQAFRDGSERL
                     LAWISKARQASQGDIAAQSNADREEAYRALRGGGFTVIALYLRHQDPLGALTALDEAG
                     LDRAITPDLRARLEAAAQEDDPEAWQDLFRVYDSLTREMQQMLSLDPRLFEGAAWGTA
                     ISLFRAEPGSFRGSLPLATRLVDYGMAEVAPLVLASGLARGAAPEQLAAALALVLNAT
                     VAEAEAGQQDAARRTFDASAPLLELASSKAFAGRVSPSPARFRYVMGALEAGRGDIAR
                     AQPLLEAAV"
     gene            1786..>3923
                     /locus_tag="VLJ38_21910"
     CDS             1786..>3923
                     /locus_tag="VLJ38_21910"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU42259.1"
                     /translation="MTEPSTRPTPKRLADFEIVRRLGAGGMAEVFLAKKRGAEGTFKL
                     LVLKRILPAYGSSRRFRTMFGEEAQLATRLNHPNIVQVYDFQDYGEEGQLLSMEFVEG
                     PDLKRLVRVAQGRSQRIPPFVAAHIVAEVAKGLHYAHERKDEAGRPLDIVHRDVSPQN
                     ILLSIDGGVKIADFGIASANLFREEPGVLKGKTAYMSPEQARGERVTRKTDIYSLGVV
                     FHELLTGRSLHGAAEGAELLELVRAGVVEPPSTYVRELPSELEEIVMRALARNPDERF
                     ETARDFAGAISRALLVRQQLVDAHVLEGVISDIVGREQMQPVEPSGEGPGESQIGSEA
                     SVGLSVLETRGTAPTESRADERTGPGGPTGSERDRAHREVRHVAIVTLKLNGLEELRQ
                     AVGDAQAARVVARLKATLGEAAFRRGARWAWGVHQDGSAGTQVASSARAVVGLMANPS
                     RAPADAVWLAIDVHEVVRGSTEDLPVKIAASVGIVRGIAMGRRDKAGHLIQHALQESA
                     DHLSDLLGAQAPPGVSWVAGGLYRLVRRDFVWGDAPTIQIPDFERLGLPEHLRIYALL
                     RPHTREERLSDLHSLPSDLIGRDAELADLHSAYYGVVGSEKTPQKVAARVVYGEMGIG
                     KTALVSAFLGDLPPDARVICIECTPAFSEVPYSTVSEWFRELTGTQADQPLAEASELI
                     VRALGVTEEDPETADLVTCLAELCTGHVHTA"
BASE COUNT          586 a         1345 c         1394 g          598 t
ORIGIN      
        1 gcgcgccgca tggccgccac gtcgccgtag tgttcgagca cgtgcgcgag cagccgctcg
       61 gcgcgcgcct gattcgctcc ggggcgtccc tgcttggtcg cgtcgatgac gcgcgtgagc
      121 gcccgctcga gcgccttgcc cgcgccttcg cgatcccccg agtcgcgcag cacctcgaac
      181 tggctgtgcc agatgtcggc ttcgtcaacg ctgttcccgg atttttccgc aattcctcgt
      241 gcccgctcga gcagcttcag cgcgccgggc acgtcgcgtt tctggcgcgc aatggccgcg
      301 agcacgcgca gcgcgtcgac cgagggctcc tcttacacgg cggcttcgag cagcggctgc
      361 gcgcgcgcga tgtcgccgcg gccggcttcg agcgcgccca tgacgtaacg gaagcgggct
      421 ggactcgggc tcacgcggcc cgcgaacgct ttgctgctcg cgagctcgag cagcggcgcg
      481 gaagcgtcga acgtgcgtcg cgcggcgtcc tgttggccgg cttcggcttc ggccaccgtg
      541 gcgttgagca cgagcgcgag cgcggcggcg agctgctcgg gtgccgcgcc ccgcgcgagc
      601 ccactcgcga gcacgagcgg cgcgacctcg gccatgccgt aatcgacgag gcgcgtcgcg
      661 agcggtagcg agccgcggaa gctgccgggc tccgcgcgaa acagagagat cgccgtgccc
      721 caagccgcgc cctcgaacag gcgcggatcg agcgacaaca tctgttgcat ctcgcgcgtg
      781 agcgagtcgt agacgcggaa gagatcttgc cacgcttcgg ggtcgtcttc ctgcgccgcc
      841 gcttcgagcc gtgcgcgtaa atcgggggtg atggcgcggt cgagtccggc ttcgtcgagc
      901 gcggtgagcg cgccgagcgg gtcctggtgc cgcaaataga gcgcgatgac cgtgaacccg
      961 ccgccccgca aagcgcggta ggcttcttcg cggtcggcgt tcgactgtgc ggcgatgtcg
     1021 ccttggctcg cttgccgcgc cttgctgatc caggcgagca gacgttcgga gccgtcacga
     1081 aatgcttgat cactgctgtc gaagagcgcg cgctgcgccg cgacgcgtgc gtccgatccc
     1141 gcggcaacga gaggcccgct cgcgcccgtc agcgcgtgga acgacgccat ggcttgcagg
     1201 tgcgtctcga cgtcttcacg ctcgggtccc ggagcgagca acccatcgag cagcgaatag
     1261 agcgcgagcg cgtagccttc ctcgcccagg cgagcggcga cggcagcgcc ctgttcgagc
     1321 gcgggcgccg cgtgcgtgaa cgcctcccgt cgaaactcgc cgcgccgcat cagaaagaac
     1381 gcgccttgga ggctcgtgta cccgttctcc gggtggtcgg aatcgaagcg ctgccgcgag
     1441 cgctcgagct ggcgcgcgac caccccggcg aggaggctcg cgcgcttcgg gccggtgtcg
     1501 gcgccgacga gcacgcggta ggcgctcgtc gcgaaggaag cgtcgtccac ggccacgggc
     1561 gtgatggggc cgaggtccga agccgcgctc ttcggcggtt tggcggtcgc ctgcgtgccg
     1621 gcgcagccgg cgagcgtcac cccgaggaga agcgcgctca aaatgcccgt gtgcctgggg
     1681 atttgccgtg acggcgcata ggcgcgttgc atcgaagcgc gagtctacac cgggcatgaa
     1741 tgtcgcggta acctgctcgc ttgggcgccg gagcggcgct cgccaatgac ggaaccgtcc
     1801 acccggccaa cgccgaagcg cctcgccgac ttcgagatcg tccgccggct cggcgcaggc
     1861 gggatggcgg aggtcttcct cgcgaagaaa cgcggcgccg aaggcacgtt caagctgctc
     1921 gtgctcaagc gcatcttgcc ggcctacggt tcgtcgcggc gctttcgcac gatgttcggc
     1981 gaggaggcgc agctcgcgac gcgcctgaac cacccgaaca tcgtccaggt ctacgatttt
     2041 caggactacg gggaggaggg ccagctcctc agcatggagt tcgtggaggg gcccgatctg
     2101 aagcgcctcg tgcgcgtcgc gcagggtcga agtcagcgca tcccgccgtt cgtcgcggcg
     2161 cacatcgtgg ccgaagtcgc caagggcctg cactacgcgc acgagcgcaa agacgaagcc
     2221 ggtcgtccgc tcgacatcgt gcaccgtgac gtctcgccgc aaaacatttt gctctcgatc
     2281 gacggcggcg tgaaaatagc ggacttcggc atcgcctcgg cgaacttgtt ccgcgaggag
     2341 cccggcgtcc tcaagggcaa gaccgcgtac atgtcgcccg agcaagcgcg cggcgaacgc
     2401 gtgacgcgca aaaccgacat ttattcgctg ggcgtcgtgt tccacgagct tttgacgggc
     2461 cgctcgctcc acggcgcggc cgaaggcgcg gagctgctcg agctcgtgcg cgccggtgtc
     2521 gtcgagccgc cgagcacgta cgtgcgggag ctgccgagcg agctcgagga gatcgtgatg
     2581 cgcgcgctcg cgcgcaatcc cgacgagcgc ttcgagacgg cgcgcgattt cgcgggcgcg
     2641 atcagccgcg cgttgctcgt ccggcagcag ctcgtcgacg cgcacgtgct cgagggcgtg
     2701 atttccgaca tcgtcggacg cgagcaaatg cagccggtcg agccgtcggg cgaagggccc
     2761 ggcgagagcc agatcggcag cgaggcgagc gtcgggcttt cggtgctcga gacgcgcggc
     2821 acggcgccga ccgagtcgcg cgccgacgaa cgcacgggac ctggcggacc gacgggcagt
     2881 gaacgcgatc gcgcgcatcg cgaggtgcgt cacgtcgcga tcgtcacgtt gaagctcaac
     2941 ggactcgagg agctcaggca agcggtcggc gacgcgcagg cggcgcgcgt cgtggcccgt
     3001 ctgaaggcga cgctcgggga agcggcgttt cgccgtggcg ctcgctgggc ctggggcgtg
     3061 caccaagacg gctcggcggg cacgcaagtc gcgtcctccg cgcgcgcggt cgtcggcctg
     3121 atggcgaatc cctcgcgcgc gccggccgac gccgtctggc tcgccatcga cgtgcacgaa
     3181 gtggtgcgcg gcagcaccga ggacctgccc gtcaaaatcg cggcgagcgt cggcatcgtg
     3241 cgaggtatcg ccatgggccg gcgcgacaag gccggccacc tcattcagca cgcgctgcaa
     3301 gagtcggccg atcatttgtc ggacctgctc ggcgcgcagg cgccgcccgg cgtgagctgg
     3361 gtcgcgggtg ggctttaccg cttggtgcgt cgcgatttcg tctggggcga cgccccgacc
     3421 atccaaatcc ccgacttcga acggctcggt ctacccgagc acctgcgcat ctacgcgctc
     3481 ttgcgcccgc acacgcgcga ggagcgcctg agcgatctgc attcgctgcc gagcgatctc
     3541 atcggtcgcg acgccgagct cgccgacttg cattcggctt actacggggt cgtcggctcc
     3601 gagaagacgc cgcagaaggt cgcggcgcgc gtcgtctacg gcgagatggg catcggtaag
     3661 acggcgctgg tttccgcgtt tctgggcgat ttgccgcccg acgcgcgcgt catctgcatc
     3721 gagtgcacgc ccgccttcag cgaagtgccg tactcgaccg tgagcgagtg gttccgcgag
     3781 ctcacgggca cccaagccga tcaaccgctc gctgaagcct ccgagctcat cgtacgcgcg
     3841 ctcggcgtca cggaggaaga tcccgagacg gcggacctcg tcacgtgcct cgccgagctc
     3901 tgcacgggcc acgtgcacac cgc
//
LOCUS       DATIML010001269         6152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2577795, whole genome shotgun sequence.
ACCESSION   DATIML010001269 DATIML010000000
VERSION     DATIML010001269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6152
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2577795"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VLJ38_21915"
     CDS             complement(<1..569)
                     /locus_tag="VLJ38_21915"
                     /inference="COORDINATES: protein motif:HMM:NF013786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HSU42260.1"
                     /translation="MTAGALLDGVFPADIAVASSRVGDVPPELFPEEAALLAKAVEKR
                     RREFAHGRACARRALAAHGAPAAPLLIGPAREPLWPPRFVGSITHDRELCVAVVARAD
                     TFAGLGVDVEPDEPLTPPVAARVWSPAEASAALALGVVPEDSAAKLVFAAKEAVYKCQ
                     FPLTRTFVGFHGVSVELATGSFTAALTAPV"
     gene            complement(566..1027)
                     /locus_tag="VLJ38_21920"
     CDS             complement(566..1027)
                     /locus_tag="VLJ38_21920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family peptidase N-terminal
                     domain-containing protein"
                     /protein_id="HSU42261.1"
                     /translation="MLLAALLPGERPPRGVAGICDFRWGGRLSRLVQSGFATGALGEV
                     LLLSGRPKLPFDKVILFGVGRREDFSELVFRLVVERMLTTLEGLRARTAVVELPGRHF
                     GGIAPERAADILLEIAGARPEHDVWTLVEPSDAQRTITQQTILERRRVRQL"
     gene            complement(1099..1542)
                     /gene="nusB"
                     /locus_tag="VLJ38_21925"
     CDS             complement(1099..1542)
                     /gene="nusB"
                     /locus_tag="VLJ38_21925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HSU42262.1"
                     /translation="MGARTTAREAALQMLFAIEASDANVDEAIRDFWRELPGEAEGRP
                     YADEAVRGVRELVPDLDARIAHASKNWRLERMTRVDRNVLRLGAWELLKHSDVPRAVA
                     IDEAVELAKRYGTEESGAFVNGVLDRIADDCGRRDEPPAAAGQNE"
     gene            1599..2447
                     /locus_tag="VLJ38_21930"
     CDS             1599..2447
                     /locus_tag="VLJ38_21930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSU42263.1"
                     /translation="MRTITRKAFGPTGVDVPNVGLGTWQMENDDATSAVRALRRGLEL
                     GMTHVDTAELYGSGRAEEIVREAIAGRRDEVFLVSKVLPTNASRRGTLRACEASLKRL
                     GTDRLDCYLLHWSGSHPLAETFAAFEELTAQGKIRSFGVSNFGVPELEEALALAGPGR
                     IAQNQVLYHLGERTIEHEVVPFCEAHGIAVVGYTPFGRGSFPPASGRAELSALAEHKG
                     VTPHALALAFLTRRPSLFAIPKSSDVRHVEENAGALSLSLSAAEIAAIDQAFPVGKRR
                     RGVAML"
     gene            2509..3510
                     /gene="gmd"
                     /locus_tag="VLJ38_21935"
     CDS             2509..3510
                     /gene="gmd"
                     /locus_tag="VLJ38_21935"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017944086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HSU42264.1"
                     /translation="MPKALITGITGQDGSYLAEFLLAKGYGVHGLVRRSSTFNTWRID
                     HLPRGENFALHYGDLNDVSSLLETIRKVQPDEVYNLAAQSHVRVSFDMPEYTAECTGL
                     GCLRLLEVLRAEGLTKTRFYQASSSELYGKVHEVPQSEKTPFHPRSPYAAAKAFAFYT
                     TVNYREAYGMHAVNGILFNHESPRRGESFVTRKITRAATRIKLGMQSSLALGNLDAKR
                     DWGYAKDYVEAMWLMLQTEHPDDYVIATGETHSVREFLDETFAYLELDWKKYVKLDER
                     HLRPSEVDLLIGDPRRAQAELRWKPRTTFRELVRLMVDADLATAEREKRDDRRSPPP"
     gene            complement(3440..4531)
                     /gene="rfbB"
                     /locus_tag="VLJ38_21940"
     CDS             complement(3440..4531)
                     /gene="rfbB"
                     /locus_tag="VLJ38_21940"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: protein motif:HMM:TIGR01181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HSU42265.1"
                     /translation="MTDGASAAREPKALLVTGGAGFIGSAFIRYLLGPAGFAGTLVNL
                     DLLTYAGNLENVASVAADPRYRFVRGDIRDGELVARLVTEHAIDAIAHFAAESHVDRS
                     IAAPDAFIETNIVGTFRLLEVARRFPGLHFHHVSTDEVFGSLGATGAFREDSPYHPNS
                     PYSAAKAAADHLVRAYAHTYGLSVTLSNSSNNYGPYQLPEKLVPLMLANLLAGAPLPV
                     YGDGLHVRDWLFVDDHAEALWRIVRRGRAGETYNVGGAEERRNLELVGLLIERVAVAT
                     GKSREALERLVTFVPDRPGHDRRYSIDCEKLRRELGWAPRHTLATGLDATVRFYLERP
                     DWVASALKAAASADRRASHAPPSRDPRRP"
     gene            complement(4528..5076)
                     /gene="rfbC"
                     /locus_tag="VLJ38_21945"
     CDS             complement(4528..5076)
                     /gene="rfbC"
                     /locus_tag="VLJ38_21945"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR01221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HSU42266.1"
                     /translation="MEVLELPLAGLKLIRPRVFKDARGHFVETYSEPRYRAAGVDCTF
                     VQDNFSRSFGRTLRGLHYQAHPGQAKLLRVAFGRTFHVAVDLRPESPTFGRSHTVELD
                     ASDASELFVPRGFAHGFCALTAVADVAYKVSALYDAATERAIRWDDPELAIAWPHSEP
                     LLSERDREAESFAAFRARAGIR"
     gene            complement(5086..5958)
                     /gene="rfbA"
                     /locus_tag="VLJ38_21950"
     CDS             complement(5086..5958)
                     /gene="rfbA"
                     /locus_tag="VLJ38_21950"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000857511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HSU42267.1"
                     /translation="MKGIVLAGGHGTRLHPATLAISKQLLPVYDKPMIYYPLSVLMLA
                     GIREVLLISTPSALPLFQHLLGRGQELGMSFSYAAQPEPNGIAEAFLIGERFLAGSPS
                     ALVLGDNIFHGAGLSELLRSARQALDGCTLFGHRVEDPERYGVAELDPAGKLLGIEEK
                     PPHPKSQIAVTGLYFYDADAPEAVKSLTPSARGELEITDLSNVYVRRGKCTLELFRRG
                     MAWLDTGTPRSLLEAGQFVQVLQERQGTQIACLEEIALRMKYIDAATFERLALAYGPS
                     AYGEYLRTLLRELH"
BASE COUNT         1049 a         2048 c         2139 g          916 t
ORIGIN      
        1 accggcgcgg tgagtgcagc cgtgaaggaa ccggtggcga gctcgacgct cacgccgtgg
       61 aagccgacga acgtgcgtgt cagcgggaat tggcacttgt atacggcttc tttggcggca
      121 aagacgagct tggcggcgct gtcttcgggc acgaccccga gcgcgagcgc ggcgctggcc
      181 tcggcgggag accagacgcg agccgcgacg ggcggcgtga gcggctcgtc gggttcgacg
      241 tcgacaccga ggccggcgaa cgtgtcggcg cgcgccacga cggcgacgca gagctcgcga
      301 tcgtgggtga tgctgccgac gaaacggggc ggccagagcg gctcgcgcgc cgggccgatc
      361 aggagcggcg cggcgggggc accgtgcgcg gcgagtgcgc ggcgcgcgca agcgcgaccg
      421 tgcgcgaatt ctcgccggcg cttctcgacg gctttggcga gcagcgcggc ttcttcgggg
      481 aacagctccg gcggcacgtc gcccacgcgc gacgaggcaa cggcgatgtc cgccgggaac
      541 acgccgtcga gcaacgctcc ggccgtcaaa gctgccgcac gcgccggcgc tcgaggatgg
      601 tctgctgcgt gatggtgcgc tgcgcgtcac tcggttcgac gagcgtccac acgtcgtgct
      661 cgggtcgcgc gccggcgatt tcgagcaaga tgtcggcggc gcgctcgggc gcgatgccgc
      721 cgaagtgacg gcccgggagc tcgacgacgg cggtgcgcgc gcgcaagccc tcgagcgtcg
      781 tgagcatgcg ctccacgacg aggcgaaaga cgagctccga gaaatcctca cgccggccga
      841 cgccgaagag aatcaccttg tcgaacggga gcttcggccg gccggagagc aggagcacct
      901 ccccgagcgc ccccgtggca aagcccgact gaaccagtcg cgacaagcgt ccgccccagc
      961 gaaagtcaca gatccccgca acgccgcgcg gcgggcgctc acccggcaag agcgcggcga
     1021 ggagcacctc cgtgcccgag agatcgagcc gtctcaggct cggcgggatg aagcgcaggt
     1081 cgatggcgcg actcctctct actcgttctg tcccgcggcc gcgggcggct cgtccctgcg
     1141 accgcagtcg tcggcgatcc gatcgaggac gccgttgacg aacgcgccgc tctcttcggt
     1201 gccgtagcgt ttggcgagct cgacggcttc gtcgatcgcg accgcgcgcg gcacgtcgga
     1261 gtgtttgagg agctcccagg cgccgaggcg cagcacgttg cgatcgacgc gcgtcatgcg
     1321 ctcgagtcgc caattcttgc tcgcgtgggc gatgcgcgcg tcgaggtcgg gcacgagctc
     1381 acgcacgccg cgcacggctt cgtcggcgta aggccgacct tcggcttctc cgggcagctc
     1441 gcgccaaaag tcccgaatgg cttcgtccac gttcgcatcg ctcgcctcga tcgcgaacag
     1501 catctggagc gcggcttcgc gagcggtggt gcgggcaccc atggacgcta gcgggtacca
     1561 caaggctcag cgctcggcca cgcgctaccc ttccgcacat gcgcaccatc acacgcaaag
     1621 cctttggacc gaccggggtg gacgtgccga acgtcgggct cggcacctgg caaatggaga
     1681 acgacgatgc gacgagcgcc gtgcgcgcgc tccgccgcgg cctcgagctc ggcatgacgc
     1741 acgtcgatac ggccgagctc tatgggtcag gtcgggccga ggagatcgtg cgtgaagcaa
     1801 tcgccgggcg gcgcgacgag gtgttcctgg tgagcaaggt gctgccgacc aacgcctcgc
     1861 gccgcggcac gctcagggcc tgcgaggcca gcctcaaacg cctcggcacc gatcgtctgg
     1921 attgctactt gctgcattgg tcgggttcgc acccgctcgc cgagacgttc gccgcgttcg
     1981 aagagctcac cgcgcagggg aaaatccgca gctttggcgt gagtaacttc ggcgtccccg
     2041 agctcgaaga ggcgctcgcg ctcgcgggac ccggccgcat cgctcaaaat caggtgctct
     2101 atcacttggg cgaacgcacg atcgagcacg aggtcgtgcc cttctgcgag gcgcacggga
     2161 tcgccgtcgt cggctacaca ccgttcgggc ggggttcgtt tccgccggcc tcgggccgcg
     2221 ccgagctcag cgcgctcgcc gaacacaagg gcgtcacgcc gcacgccctc gcgctcgcct
     2281 tcctgacgcg ccggccgagc ctgttcgcaa tccccaaatc ctcggatgtg cgccacgtcg
     2341 aagaaaatgc aggcgcgctg tcactgtcgc tctccgccgc ggaaattgcc gcaatcgacc
     2401 aggctttccc cgtcggcaag cgacggcgcg gcgtggcaat gctttgaatt tggggcatag
     2461 tcccgccccc gagccgggcc cagcgaacgc cggcgggatc ttaagcacat gccgaaagca
     2521 ctcatcacgg gcatcacggg acaagatggc tcttacttgg cggagtttct gctcgccaag
     2581 ggttacggcg tacacgggct cgtccggcgc tcctcgacgt tcaacacctg gcgaatcgat
     2641 cacctgccgc gcggcgaaaa cttcgcgctc cactacggcg atctgaacga cgtctcgagc
     2701 ttgctcgaaa cgattcgcaa ggtgcagccg gacgaggttt acaatctggc ggctcagagc
     2761 catgtgcgcg tgagcttcga catgcccgaa tacacggccg agtgcacggg cctcggctgc
     2821 ctgcggctgc tcgaggtgct gcgcgccgag ggcctcacga agacgcgctt ttatcaggcg
     2881 tcgagctcgg agctctacgg caaggtgcac gaggtgccgc agagcgaaaa gacgccgttc
     2941 cacccgcgga gcccctacgc cgccgccaag gcgttcgcgt tctacacgac ggtcaactac
     3001 cgcgaggcgt acggcatgca cgcggtgaac ggcatcctct tcaaccacga atccccgcgc
     3061 cgtggcgaga gcttcgtcac gcgcaagatc acgcgcgccg cgacgcgcat caagctcggt
     3121 atgcagtcgt cgctcgcgct cggcaacctc gacgcaaagc gcgactgggg ttacgccaaa
     3181 gactacgtcg aagcgatgtg gctgatgctc caaacggagc accccgacga ctacgtcatc
     3241 gccacgggcg agacccacag cgtgcgcgag ttcttggacg agacgttcgc gtacctcgag
     3301 ctcgactgga agaagtacgt gaagctcgac gagcgccacc tgcgcccgag cgaggtagac
     3361 cttctgatcg gcgatccgcg gcgcgcgcaa gccgaactcc gctggaagcc gcgcaccacg
     3421 ttccgcgagc tcgtgcggct catggtcgac gcggatctcg cgacggcgga gcgtgagaag
     3481 cgcgacgatc ggcgctcgcc gccgccttga gcgcgctcgc gacccagtcc ggccgctcga
     3541 gataaaatcg caccgtcgcg tcgaggcccg tcgcgagcgt gtgtcgtggc gcccagccga
     3601 gttcgcgccg gagcttctcg cagtcgatcg agtaacgccg atcgtgaccg ggacggtcgg
     3661 gcacgaaggt cacgaggcgc tcgagcgctt cgcgcgattt ccccgtagcg acggcgaccc
     3721 gctcgatcaa aaggccgacg agctcgaggt tccggcgctc ttcagcgccg ccgacgttgt
     3781 acgtctcgcc cgcgcgacca cgccgcacga tgcgccagag cgcttcggcg tggtcgtcga
     3841 cgaagagcca atcgcgcacg tggagtccgt cgccgtacac gggcaacggc gcacccgcga
     3901 gcaggttcgc gagcatgagc gggacgagct tttcgggcag ctggtagggg ccgtagttgt
     3961 tgctcgagtt cgaaagcgtg acggacagcc cgtaggtatg agcgtaggcg cgcacgaggt
     4021 gatcggcggc ggccttcgcg gccgaatagg gtgaattcgg gtggtagggc gagtcttcac
     4081 ggaaggcgcc cgtcgcgccg agcgagccga acacttcgtc cgtcgagacg tggtggaagt
     4141 gaaggccggg aaagcggcgt gcgacctcga gtaagcgaaa agtgccgacg atgttggttt
     4201 cgatgaaggc gtcgggcgcg gcgatgctgc gatcgacgtg cgattcggcc gcgaagtgcg
     4261 cgatggcgtc gatggcgtgc tcggtcacga gccgcgcgac gagctcgccg tcgcggatgt
     4321 caccgcgcac gaagcgatag cgcgggtcgg cggcgacgct cgcgacgttt tcgaggttac
     4381 cggcgtacgt gagcaggtcg aggttcacga gcgtacccgc gaagcccgcg gggccgagca
     4441 ggtagcgaat gaacgccgag ccgatgaagc cggcgccgcc cgtgacgagc agcgccttgg
     4501 gctcgcgcgc ggcgctcgcg ccgtcggtca ccggatgccc gcccgggctc ggaacgcggc
     4561 gaaactctca gcctcgcgat cacgctcgga gagcagcggc tcgctgtgcg gccaggcgat
     4621 cgcgagctcc gggtcgtccc agcggatggc gcgttccgtc gcagcgtcat agagcgccga
     4681 caccttgtac gccacgtccg cgacggcggt gagcgcgcag aagccatgcg cgaacccgcg
     4741 cgggacgaag agctcgctcg cgtcgctcgc gtcgagctcg accgtgtgcg agcggccgaa
     4801 cgtgggcgat tccggacgga gatcgacggc gacgtggaac gtacgaccga acgcgacgcg
     4861 caagagcttg gcttgcccgg ggtgagcttg gtagtgaagc ccgcgcaacg tccgcccgaa
     4921 cgagcgcgaa aagttgtcct gcacgaacgt gcaatcgacg ccggccgcgc gataacgcgg
     4981 ctccgaatac gtctcgacga aatggccacg cgcgtccttg aacacacgtg gacgaatcag
     5041 cttgagaccg gcgagcggca actccaaaac ttccacgggc gcccctcagt gtagttcgcg
     5101 caacagcgtg cgcaggtact cgccgtaggc gctcggccca tacgccaaag ccagccgctc
     5161 gaacgtcgcg gcgtcgatgt atttcatgcg cagagcgatc tcctccaaac aagcgatctg
     5221 ggtgccctga cgctcttgca gcacctgcac gaactgcccc gcttcgagca ggctgcgggg
     5281 cgtgcccgta tcgagccagg ccatgccgcg gcggaagagc tcgagcgtgc atttgccgcg
     5341 ccgcacgtac acgttgctca gatccgtgat ctcgagctca ccccgcgccg agggcgtgag
     5401 tgatttgacg gcttcgggtg cgtcggcgtc gtaaaagtag aggcccgtga cggcgatctg
     5461 cgacttcggg tgggggggtt tctcttcgat gccgaggagc ttgcccgcgg ggtcgagctc
     5521 cgccacgccg taacgctcgg gatcttcgac gcggtgaccg aagagcgtac agccgtccaa
     5581 ggcttgccgc gccgagcgga ggagctcgga gagccccgcg ccgtggaaga tgttgtcgcc
     5641 gagcacgagc gccgacgggc tgcccgcgag gaagcgctca ccgatgagga acgcctcggc
     5701 gatgccgttc ggctcgggtt gcgcggcata gctgaagctc atgccgagct cctggccgcg
     5761 cccgagcagg tgctggaaga gcggcagcgc cgacggggtc gagatcaaca agacctcccg
     5821 aatcccagcc agcatcagga ccgacagcgg gtaatagatc atcggcttgt cgtagaccgg
     5881 caagagctgc ttcgagatgg cgagcgtcgc cgggtggagt cgcgtcccgt ggccgccggc
     5941 gagcacgatg cccttcatcg tattcgaagc ttactctagc cttgcgtgca tcgctcgggc
     6001 gcgcgtgcga gaacgtggcc ggcttggact cttctcggcg aaattcgacc cgcgctcccg
     6061 gcgcggacag gccgcgcgtc acgatcgcga acccgacgct cggcgacgcg gagcgcgccg
     6121 ccgtgctcga ggtattcgac ggccacgagc tc
//
LOCUS       DATIML010001270         1572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_557926, whole genome shotgun sequence.
ACCESSION   DATIML010001270 DATIML010000000
VERSION     DATIML010001270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_557926"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="VLJ38_21955"
     CDS             complement(<1..970)
                     /locus_tag="VLJ38_21955"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-32"
                     /protein_id="HSU42268.1"
                     /translation="MAERKKRRSPKSKSEPPRGDDPEARGASGDGSETEPDGDGRDGL
                     DGDDDVLEAAGELVDERDAPLDVDEPKGLARYDALQAYMREVRRHPLLTPDEEHRLAV
                     EYAKSGDVDIAARLVTANLRLVVKLAYEYRRAFKNMMDLVQEGNIGLMQAVKRYDPYR
                     GVKLSSYAAWWIRAYMLRFILNNWRLVKIGTTQAQRKLFFNLSKEKAKLKALGIEPTS
                     EEIAKRLNVAESDVVEMDRRLARADASLDTPVASSDGRTTTRLELLPGNSDTPELATE
                     SAELQTALHQRLDEFRKTLTGKDVQIFEKRLVADEPLTLQELGDQFG"
     gene            1163..>1572
                     /locus_tag="VLJ38_21960"
     CDS             1163..>1572
                     /locus_tag="VLJ38_21960"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSU42269.1"
                     /translation="MRIIDDSRVGNRAGSKRTEDSGLHAMPVWSGRARILVIDDEPLL
                     GRTLSFMLEESHDVVVVDGGAEALKRLGEDTRFDLVLCDLDMPGVNGSSVHTAMSDRH
                     PELVPRFVLMTGGACSDWAEEFLARYSGARLEKP"
BASE COUNT          219 a          514 c          527 g          312 t
ORIGIN      
        1 caccgaactg atcgccgagc tcctgcaagg tgagcggctc gtccgcaacc agacgcttct
       61 cgaagatttg cacgtcctta cccgtgagcg tcttcctgaa ctcgtcgagg cgctggtgga
      121 gcgccgtctg gagctcggcg ctctccgtgg cgagctcggg cgtgtcgctg ttgcccggca
      181 agagctcgag ccgtgtggtg gtgcgaccgt cgctgctggc gaccggagtg tcgagcgacg
      241 cgtcggcgcg cgcgagcctg cgatccatct cgaccacgtc ggattcggcc acgttcaggc
      301 gcttggcgat ttcctcgctc gtgggctcga tgccgagcgc cttgagcttg gctttctcct
      361 tgctcagatt gaagaagagc ttgcgctgtg cctgcgtcgt gccgattttg acgagccgcc
      421 agttgttgag gatgaagcgc agcatgtacg cgcggatcca ccacgcggcg taactcgaga
      481 gtttgacgcc gcggtacggg tcgtagcgct tgaccgcttg catcaagccg atgttcccct
      541 cttgcacgag gtccatcatg ttcttgaacg cgcggcggta ctcgtaggcg agcttcacca
      601 cgaggcgcag gttcgccgtg acgagccgcg cggcgatgtc gacgtcgccg ctcttggcgt
      661 actcgaccgc caagcgatgc tcctcgtccg gcgtgagcag cggatggcga cggacctcgc
      721 gcatgtacgc ttgcagcgcg tcgtagcgcg cgagcccctt cggctcgtcg acgtcgagcg
      781 gcgcgtctct ctcgtcgacg agctcgcccg cggcttcgag cacgtcgtcg tcaccgtcga
      841 gaccgtctcg gccgtcgccg tccggctccg tctcgctgcc gtccccggac gcgccacgtg
      901 cctcgggatc gtccccccgc gggggttcgc tcttgctctt cggcgagcgg cgcttctttc
      961 gttcggccac ggttcccgat gacttagcac tggcgccctc tggacctaag cctaccgacc
     1021 cacttgccag ccgaagggcc ggctgtgctc ccagatcctc tcatttccgc tgggcgattc
     1081 gattttgacg tgtccgtccg gccagagcgc gccggcaggg gagccggccg ctcgtgctat
     1141 acgtttgtcg ttcgaggggc acatgaggat catcgacgac tcgcgggtag gcaatagggc
     1201 cggttcgaag cgcacggagg acagcgggct ccacgcgatg ccggtgtgga gcggtcgtgc
     1261 gcgcattctg gtcatcgatg acgagccgct gctcggccgg acgctgagct tcatgctcga
     1321 ggagagccac gacgtggtcg tggtggacgg cggggcagaa gcgctcaaac gtctgggcga
     1381 ggacacgcgt ttcgacctcg tgctctgtga cctcgacatg ccgggcgtca acggctcgag
     1441 cgtgcacacc gcgatgtcgg atcgacaccc cgagctcgtg ccgcgcttcg tgctcatgac
     1501 gggcggcgcc tgctccgatt gggcagaaga atttttggcg cgctactcgg gcgctcggct
     1561 cgagaagccg tt
//
LOCUS       DATIML010001271         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_558037, whole genome shotgun sequence.
ACCESSION   DATIML010001271 DATIML010000000
VERSION     DATIML010001271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558037"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1361
                     /locus_tag="VLJ38_21965"
     CDS             <1..1361
                     /locus_tag="VLJ38_21965"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSU42270.1"
                     /translation="RLEMKNVTTAPELMGVRGLFYFAKDPLAAFTHAARTYGDVVGFA
                     RTGRSYILLSHPDAIEAVLHYRGDALRKDFFTRSLGTIFGEGLLNAEGAHWKHQRKLM
                     APTFQPRELSGFATSMVACTDELCASFAEGELRDVHADGMHLALDIVVRTLFGSTFKR
                     FDDVERALGGISDEYRQLWQTWRALVPTWVPLPNHARLRRRRAELDAILFELIQNKRA
                     APGEDLLSHLIALTDDEGRGMSDEQLRDESMTLFLAGHETTALGITYMFRLLAEHPEV
                     YARVVAEVDTVLGERAPTHADVERLPFTGAVVREALRLYPPVWTSARQATADVVIGDI
                     PIPKNAHVMFSQWVVQRDARWFREAERFRPERWLGDECASLPRFAYFPFGGGPRVCIG
                     QHFALLELVLVLARTSQKVMFEASGDPLSLGPVVTLRPTGPVRLRVTRRSRPEVPRAA
                     AE"
     gene            1409..1852
                     /locus_tag="VLJ38_21970"
     CDS             1409..1852
                     /locus_tag="VLJ38_21970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42271.1"
                     /translation="MTSLGVSKGLAFVLFVALATACSGGDDDQKACTTPNIDGSPYGS
                     SGTATVHGGGTLPSGLPDGHQLELLVSQGGFSAGVLPDNLFDLSYVCGRNFKFTIRNL
                     EAGTYGLEYELFDPHSDSTDPEFQDTSSNQFTVTDGQDLEFTPTF"
     gene            1921..>2333
                     /locus_tag="VLJ38_21975"
     CDS             1921..>2333
                     /locus_tag="VLJ38_21975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42272.1"
                     /translation="MLLALPHDEPARPPHRYLRTPAPLNFPEEECLSDSDEHFERRVL
                     LWESVRLAVGEQGLVSSDQFVYFDPTDPQQCLAPDLGVRLGTPRRRIKTWKTWEWGPP
                     QVGVEIVSRSDTPRRVALAKLERYRQAGILEAVRF"
BASE COUNT          379 a          810 c          751 g          393 t
ORIGIN      
        1 ggaggctcga aatgaaaaac gtgacgaccg ctccggagct catgggcgta cgcggcttgt
       61 tctatttcgc caaggatccg ctggccgcgt tcacgcacgc tgcgcggacg tacggcgacg
      121 tggtcggctt cgcgcggacc ggccgcagct acatcttgct gagccatccc gacgccatcg
      181 aagccgtgct ccactaccgc ggcgacgcgc tccgcaagga cttcttcacg cgctcgctcg
      241 gaaccatttt cggcgagggt ttgctgaacg ccgagggcgc ccactggaag caccagcgca
      301 agctgatggc cccgactttt cagccgcgtg agctctccgg tttcgcgacg agcatggtcg
      361 cctgcaccga cgagctctgc gcgagctttg ccgagggcga gctgcgcgac gtgcacgcgg
      421 acggcatgca cctcgcgctc gacatcgtcg tccgcaccct gttcggctcg accttcaagc
      481 gcttcgacga cgtggagcgc gcgctcggtg ggatttccga cgagtaccga cagctctggc
      541 agacgtggcg ggcgctcgtg ccgacctggg tgccgctgcc caatcacgcg cgcttgcgcc
      601 gtcgacgcgc cgaactcgac gcgatcttgt tcgagctcat ccaaaacaaa cgcgcggcac
      661 caggcgagga tttgctctcg cacttgatcg cgctcacgga cgacgagggc cgcggcatga
      721 gcgacgagca gctccgcgac gaatcgatga cgctctttct cgccgggcac gagaccacgg
      781 cgctcggaat cacctacatg tttcggctgc tcgccgagca cccggaggtg tacgcgcgcg
      841 tggtcgccga ggtggacacc gtcctcggcg agcgcgcgcc gacgcacgcc gacgtcgaac
      901 ggctgccgtt caccggcgcc gtggtgcgcg aagcgctgag gctgtatccg ccggtttgga
      961 ccagcgcgcg gcaagcgacg gccgacgtcg tgatcggcga catcccgatc ccgaaaaatg
     1021 cgcacgtgat gttcagccag tgggtggtcc agcgcgacgc gcgctggttc cgcgaagcgg
     1081 aacgcttccg cccggagcgc tggctcggcg acgaatgcgc gagtctgccg cgcttcgcgt
     1141 actttccgtt cggcggcggc ccgcgcgtct gcatcggcca gcatttcgcc ctgctcgagc
     1201 tcgtgctcgt gctggcgcgc acgagccaaa aagtgatgtt cgaggcctcc ggcgatccgc
     1261 tctcgctcgg acccgtcgtc acgctcaggc cgaccggccc cgttcgcctg cgcgtcacgc
     1321 gccgctcgcg ccccgaagtg ccgcgcgccg ccgccgaata ggaagcaatc gccgctagag
     1381 gcggtaggat gcccgctgga ggctcggaat gacttcactt ggtgtttcga aagggctcgc
     1441 cttcgtgctc ttcgtcgccc tcgcgacggc gtgcagcgga ggcgacgacg accagaaggc
     1501 gtgcacgacc ccgaacatcg acggctcgcc gtacggttcg agcggcacgg cgaccgtgca
     1561 cggcggcggg acgctgccgt ccggcttgcc cgacggccac cagctcgagc tgctcgtcag
     1621 tcagggcggc ttttcggccg gcgtgctgcc cgacaatctg ttcgacctgt cttacgtgtg
     1681 cggacgcaat ttcaagttca cgatccgcaa cttggaggcc ggcacgtacg gcctcgaata
     1741 cgagctcttc gaccctcact cggactcgac cgaccccgag ttccaagaca cgtcgagcaa
     1801 tcaattcacg gtgacggacg ggcaggacct cgaatttacg ccgacattct agccgttacg
     1861 gggaccggcg acgcaactcg gggtagccgc cgaccgatgc gagcgcggtg gtacactccc
     1921 atgctcttgg ccctgcccca cgacgaaccc gcccgccctc cgcatcgtta cctgcgcact
     1981 ccggcgccgc tgaatttccc cgaagaagag tgcttgtccg actcggatga gcatttcgag
     2041 cggcgcgtcc ttttgtggga gagcgttcgg ctcgccgtcg gtgagcaggg gctcgtgagt
     2101 tccgaccagt tcgtctactt cgaccccaca gacccgcaac aatgcctcgc gcctgatctc
     2161 ggcgtgcggc tcggcacgcc acgtcgccgc atcaagacct ggaagacgtg ggagtgggga
     2221 ccgccccagg tcggcgtcga gatcgtgagc cgctccgaca cgccgagacg agtagcgctc
     2281 gccaaactcg aacgctatcg ccaggccggg atcctcgaag ccgtgcgttt cga
//
LOCUS       DATIML010001272         3590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_558929, whole genome shotgun sequence.
ACCESSION   DATIML010001272 DATIML010000000
VERSION     DATIML010001272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558929"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..689
                     /locus_tag="VLJ38_21980"
     CDS             <1..689
                     /locus_tag="VLJ38_21980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HSU42273.1"
                     /translation="GKIFTRLIKEITIAAKSGGDVDKNPRLRTAVAAAKAENMPADNI
                     KRAIQRGTGELDGASYDEVLYEGTGPSGTLYLVEGMTDNRNRTVAELRKIFEKHNGQL
                     GSSGAAGWAFDRFGVITIDKSVASEDQLMEAAVDAGADDYRDEGDTWGVYTPPTDLDR
                     VTTALEAKKIAIVSSKLAYIPKNKKPVSGRDAEVCLNLVEALDEHEDVQNVYSDFDLS
                     EDELARIASG"
     gene            complement(755..1420)
                     /locus_tag="VLJ38_21985"
     CDS             complement(755..1420)
                     /locus_tag="VLJ38_21985"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HSU42274.1"
                     /translation="MKRVGIAFFVVLATYAAAFRVELAGRPAFFWTFGIPHVLLAAYA
                     LERFKQEGTLAARLTPRGGDITWGALPGIALLGASWVARSVLVPTGTPRQAWLLRLYL
                     VLGDPETLQGSVFLTSALVVIVIAEELVWRGMVLDELSERFGPRRGWVLAAGLYALAA
                     APTLYSLRDPVAGPNPLLVSAAFGCGLVWTFLAGRFGRLVPSIVAHLVFTYFSAVQFR
                     WPV"
     gene            complement(1417..2649)
                     /gene="coaBC"
                     /locus_tag="VLJ38_21990"
     CDS             complement(1417..2649)
                     /gene="coaBC"
                     /locus_tag="VLJ38_21990"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HSU42275.1"
                     /translation="MTRASAFAGRTVTLCVTGSIAAYKAVLVVRRLLTDGAHVNVVMT
                     PSAREFVGAATFAGLTGRPVYGELFAPDQPGEPHVELGKASDLVLVVPATADVLARFA
                     AGRADDLTSALALCARCPILVAPAMHPSMWKHPATERNVRALHADGRVHFVGPVDGEV
                     ASGELGMGRMAEPDDIVAAAGALLGSGPLQGVRVLVTAGPTTEDIDPVRYIGNRSSGK
                     MGFAIAERAAALGATVTLIAGPVSLPTPPRVTRIDVRTAESLKTALWQVLGTDLSGAD
                     ALIMSAAVADYRPATPSSTKIRRTDQPLTLSLLPNPDLLAEVGRARQGARPLLVGFAL
                     GTETEADAVVTARKKLADKRVDLVVSNHAAESIGRDDIVAMLVTESSCEVVSRAPKRV
                     LAERLLAWVASALAARLG"
     gene            complement(2646..3323)
                     /locus_tag="VLJ38_21995"
     CDS             complement(2646..3323)
                     /locus_tag="VLJ38_21995"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF002003.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HSU42276.1"
                     /translation="MCEDRSCVPAPATNPSVRPSRLTPLPRSFYARPVLTVARESVGK
                     ILVHDTKAGRAAGRIVEAEAYRGPEDRAAHSFGGRRTARTEAMFGPPGYAYVFFVYGM
                     HWHVNLVTTAEEMPHAVLIRAVEPLEGVELMAARRGLSPADRNLTNGPGKVCEAFEID
                     KRCYGLDLCRSELFLSDGPRAKVTRAARIGVDYAGEWAARPWRFFDAASAYVSRAPRG
                     RARKLSR"
BASE COUNT          616 a         1206 c         1266 g          502 t
ORIGIN      
        1 gcggcaagat cttcactcgg ttgattaaag aaatcaccat cgccgccaaa agcggtggcg
       61 acgtcgacaa gaacccgcgc ctgcggaccg ccgtggctgc cgccaaggct gagaacatgc
      121 ccgccgacaa catcaagcgc gccatccagc gcggcacggg cgagctcgac ggcgcttcct
      181 acgacgaagt gctgtacgag ggcacggggc cgagcggcac cctctacctg gtcgagggca
      241 tgacggacaa tcggaaccgc accgtcgccg agctgcgcaa gattttcgag aagcacaacg
      301 ggcagctcgg gagctcgggt gcggcgggtt gggccttcga tcgcttcggc gtgatcacga
      361 tcgacaaatc ggtcgcgagc gaggatcagc tgatggaagc agccgtcgac gccggcgccg
      421 atgactaccg cgacgaaggc gacacctggg gcgtgtacac gccgccgacc gacttggatc
      481 gcgtgacgac cgccctcgag gcgaagaaaa tcgcgattgt ctcgagcaag ctcgcctaca
      541 tccccaaaaa caagaagccg gtctccgggc gcgacgccga agtctgcctg aacctcgtcg
      601 aagcgctcga cgagcacgag gacgtgcaga acgtctactc cgacttcgac ctgtccgagg
      661 acgagctcgc gcgcatcgcg agcggttagt ttattttcgt agcggcaacc gtcggcgcac
      721 gcgcacgtcc ctgcttactc cgtctcgggt gcgctcacac gggccagcgg aactggacgg
      781 cggaaaaata cgtgaacacc aggtgcgcga cgatgctcgg tacgaggcgg ccgaagcgcc
      841 cggcgaggaa cgtccacacc agtccgcagc caaacgccgc gctcacgagg agcgggttcg
      901 ggcctgccac gggatcacgc agactgtaca gggtcggtgc ggctgcgagg gcatagagcc
      961 cggccgccag cacccaaccc cggcgcggac cgaagcgctc gctcagctcg tcgagcacca
     1021 tgccgcgcca cacgagctcc tcggcgatga cgatcacgac gagcgcgctc gtgaggaaga
     1081 cggagccctg gagcgtctcc ggatcgccga gcacgagata gagccgcaaa agccaggcct
     1141 gtcgcggtgt gcccgtcggg acgagcacgg agcgcgccac ccaggaggcg ccgagcagcg
     1201 cgatgcccgg cagcgcgccc caggtgatgt cgccgccgcg cggcgtgagc cgtgccgcaa
     1261 gcgtgccttc ctgtttgaag cgctctagcg cgtacgccgc cagcagaacg tgcggaatgc
     1321 cgaacgtcca gaagaacgca ggacggcccg cgagctcgac acggaaggcc gccgcatacg
     1381 tggcgagcac gacgaagaac gcgatgccga cccgcttcaa cccagcctcg cggcaagcgc
     1441 gctcgccacc caggcgagca gccgttcggc gagcacgcgt ttcggcgcgc gcgagacgac
     1501 ctcgcacgag ctttccgtga ccagcatcgc gacgatgtcg tcgcgaccga tggattcggc
     1561 agcgtgattg gagacgacga gatcgacgcg cttgtcggcg agcttcttgc gtgcggtcac
     1621 gacggcgtca gcctcggttt cggtgccgag cgcgaagccg acgagcaggg gacgcgcgcc
     1681 ctgcctcgcg cggccgacct cggcgagcaa atcgggatta ggcaagagcg agagcgtgag
     1741 cggctggtcg gtgcggcgga ttttagtgct gctcggcgtg gccggccgat agtcggcgac
     1801 ggcggcggac atgatgagcg cgtccgcgcc cgacaggtcg gtgccgagca cttgccagag
     1861 cgcggtcttc agcgattccg ccgtgcgtac gtcgatgcgc gtgactcgtg gaggcgtggg
     1921 taggctcacg gggcccgcga tgagcgtcac ggtcgcgccg agcgcggccg cacgttcggc
     1981 gatggcgaac cccattttgc ccgaagagcg attgccgatg tagcgcaccg gatcgatgtc
     2041 ttccgtcgtg ggcccggccg tgacgagcac gcgcacgccc tgcagcggcc cagagccgag
     2101 gagcgcgccc gcggccgcga cgatgtcgtc gggctcggcc atgcgtccca tgccgagctc
     2161 gccgctcgcg acctcaccgt caacgggacc gacgaagtgg acgcgcccgt cggcgtggag
     2221 cgcgcggacg ttgcgctcgg tcgccggatg cttccacatg ctcgggtgca tggcgggcgc
     2281 gaccaggatc ggacagcgtg cgcacagcgc gagcgcgctc gtgagatcat cggcgcggcc
     2341 ggcggcgaaa cgagcgagca cgtcggccgt cgcggggacg acgaggacga ggtcgctcgc
     2401 tttgccgagc tcgacgtgcg gttcgcccgg ctgatcgggc gcgaagagct cgccgtaaac
     2461 gggtcgtccc gtcagcccgg cgaaggtcgc cgcacccacg aattcacgcg cggacggcgt
     2521 catcacgacg ttcacgtgcg cgccgtcggt gagcaggcgg cgcacgacca gcaccgcttt
     2581 gtacgccgcg atgctcccgg tcacgcacag cgtgacggtg cggccggcga aggcggaagc
     2641 acgggtcatc ggctgagctt tctagcgcgc ccgcgcggtg cgcgcgacac gtacgcgctc
     2701 gccgcgtcga agaagcgcca aggtcgcgcg gcccactcgc ccgcgtaatc gacgccgatc
     2761 cgcgccgcgc gcgtgacttt cgcgcgtggg ccgtcgctca aaaagagctc gctccggcag
     2821 aggtcgagcc cgtagcagcg cttatcgatc tcgaacgcct cgcacacctt gccggggccg
     2881 ttcgtcaggt tgcgatcagc gggcgagagt ccccgccgcg ccgccatgag ctcgactccc
     2941 tcgagcggct cgaccgcgcg gatcaagacg gcgtgcggca tctcctcggc cgtcgtcacg
     3001 aggttcacgt gccagtgcat gccgtagacg aagaacacgt aggcgtagcc gggtggtccg
     3061 aacatggcct ccgtgcgcgc ggtgcggcgc ccgccgaacg agtgcgccgc gcgatcctcg
     3121 gggccacggt aagcttcggc ttcgacgatg cgcccggccg cgcgcccggc cttggtgtcg
     3181 tgaaccagga tcttgccgac gctctcgcgg gcgaccgtga gcacgggccg cgcgtaaaag
     3241 gagcgaggca ggggggtgag gcggctgggc cgaacggacg ggttcgtggc gggcgcgggc
     3301 acgcacgagc gatcctcgca cattgtgggc cgcgccgagg acctgcgggg caaaaccttg
     3361 gttttcggcg gcgagcagcc agcgaggcga tttttttgat aattctgagg atcgtcatgc
     3421 cggagccggt cgctgctgcc gcgttcacgc ccgacgccgc actcgcggag ctgcgtgtcg
     3481 cgcgaagtaa cgcgcgcccg cggctgaggc tcgcgtatct agacggcttg cgtgccctgg
     3541 cggccctata cgtcgtcgca tttcactcga tgctcggctt ctcgcgcgca
//
LOCUS       DATIML010001273         3016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3444799, whole genome shotgun sequence.
ACCESSION   DATIML010001273 DATIML010000000
VERSION     DATIML010001273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3016
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3444799"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1382)
                     /locus_tag="VLJ38_22000"
     CDS             complement(<1..1382)
                     /locus_tag="VLJ38_22000"
                     /inference="COORDINATES: protein motif:HMM:NF019219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1549 domain-containing protein"
                     /protein_id="HSU42277.1"
                     /translation="MGWFGSNVLVLGASLGLAAVSLVACGSAHAPTGSEATSTVKVDF
                     DRQVRPILSSHCFSCHGPDEAARQANLRVDTASGVLNARGSRPPVVVPGNAKASLLYQ
                     RITASASPMPPADANKPLAAGEIATVRRWIEQGASYPDRWFLVAPTRPVPPVVEHAGW
                     VKNPIDAFVAEKLEAAGLEPAPEAEPRALIRRVTLALTGLPPTPSDVEQFAANHDDTA
                     YAALVDRLLKTPAYGEQRAHYWLDAARYADTHGFHQDNYRSIWPYRDWVIGAFNSGKP
                     FDAFTVEQLAGDLLPGATMDQLIATGFIRCSMTTSEGGSIEAEVAAAKAKERVETLGK
                     VWLGLTTGCAACHDHKFDPISQKEFYELAAFFRNSTEGTFDGNVPNAPPVVTAPPTAT
                     DTLVNGEAAATPSAQVLARGNYEQPGETVGADVPGALPPLPAGEPHNRLGLAHWLLTP
                     EHPLTARVTV"
     gene            complement(1539..1712)
                     /locus_tag="VLJ38_22005"
     CDS             complement(1539..1712)
                     /locus_tag="VLJ38_22005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42278.1"
                     /translation="MALSFALFSALPAIDRGVAAQQVNGRTMRAVNWFEAAAVPNLLT
                     ASIAFAYRARRKR"
     gene            1929..>3016
                     /locus_tag="VLJ38_22010"
     CDS             1929..>3016
                     /locus_tag="VLJ38_22010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42279.1"
                     /translation="MAMSQKAWESARSLLERAERRLERLRTVEPYLIDLSLRENVFGA
                     RVGQTLADKLAILPRLRAFGFKNILLGTLDYALPDEPEVDDDFMLHLREHGIDMTGGF
                     AFTDIGSAKEDGSFTPSPSQRKLATYGVPNTLHEIYLSREGMKAAKYDLKALRRSLPR
                     SIAWLHEHVRGDHGGKPRILINIVDGCDAFSDNFAETCEILELLAGQPIEGVSFEDDR
                     GTFLPFQVGTFVAIARRFLPPPLKLLVHMHSGGGFENASLIEALLEGADGVWGGLPKR
                     AAIIGHASLGELIANLVRVGNPHMRAFRLEELLPLSTALQELDDNASVPADLPILGAN
                     AYRLTLPFFRQEGGRFMDLPPETIGGKYG"
BASE COUNT          501 a         1026 c          983 g          506 t
ORIGIN      
        1 ttgaccgtga cgcgcgccgt cagcgggtgc tccggcgtga gtagccaatg cgcgagtccg
       61 agccgattgt gcggctcgcc ggcggggagc gggggcagag cgccgggaac gtccgcgccc
      121 acggtttcac cgggctgctc gtagttgccc cgcgcgagca cttgcgcgga gggcgtggcc
      181 gcggcttcgc cgttgaccag cgtgtcggta gccgtgggcg gagccgtgac gacgggcggc
      241 gcattcggca cgttgccgtc gaatgtgccc tccgtcgaat tgcggaagaa cgccgcgagc
      301 tcgtaaaatt ccttctggct gatggggtcg aacttgtggt cgtggcacgc ggcgcagccc
      361 gtcgttaggc cgagccacac cttgccgagc gtctcgacgc gctccttcgc cttggcggct
      421 gcgacttccg cttcgatcga cccgccttcg gacgtggtca tgctgcagcg gatgaagccc
      481 gtcgcgatga gttggtccat cgttgcaccg gggagcagat ccccggcgag ctgctcgacc
      541 gtgaacgcgt cgaacggctt tcccgagttg aacgcgccga tcacccagtc ccgatacggc
      601 cagatgctgc gatagttgtc ttgatgaaag ccgtgcgtgt cggcgtagcg cgcggcgtcg
      661 agccagtagt gcgcccgttg ctcgccgtaa gcaggcgtct ttagcaggcg atcgacgagc
      721 gccgcgtaag ccgtgtcgtc atgattggcc gcgaactgtt cgacgtcgga cggagtcggg
      781 ggcagccccg tgagcgccag cgtcacccga cgaatcaaag cgcgcggctc cgcctcgggc
      841 gcgggttcga gcccggccgc ttcgagcttc tccgcgacga acgcgtcgat cggatttttg
      901 acccagccgg cgtgctccac gacgggcggc acggggcgag tgggcgcgac caaaaaccaa
      961 cgatccgggt agctcgcgcc ctgctcgatc caccggcgta cggtcgcgat ctcgcccgcc
     1021 gcaagcggct tgttcgcgtc agccggcggc atcggcgacg cgctcgccgt gatgcgctgg
     1081 tagagcagac tcgccttggc gttcccggga accacgactg gcggcctcga gccgcgcgca
     1141 ttcagcacgc cgcttgccgt atccactctc aggttcgcct ggcgcgccgc ctcgtcgggt
     1201 ccgtggcacg agaagcagtg agacgaaagg atcggccgca cctgccgatc gaagtcgacc
     1261 ttcaccgtgc tcgtcgcctc ggacccggtg ggcgcatgcg ccgacccgca agccacgaga
     1321 ctcaccgcag cgagcccgag gctcgcgcca agcaccagaa cgttcgagcc gaaccaaccc
     1381 atgaccacca acgacccgca gcgcccgtac gccgcaccgc tcaccacacc aaccgctgct
     1441 agtattatca cggctggttc gctcaggcca ggcccgcctc gccgcgctcg cgcggctccg
     1501 caaggttccg caacgatttt gcacttgggt gcctcgactc agcgtttcct tcgcgcgcgg
     1561 taagcgaatg caatgctcgc cgtgagcaag ttcggaaccg cggccgcctc gaaccagttc
     1621 acggcgcgca tggtgcggcc gttgacctgt tgggccgcaa cgccgcgatc gatcgccggt
     1681 agggccgaaa acagcgcgaa ggaaagggcc acgtagaccc cgagcagacc gaagtcggac
     1741 ggccgcgcac gcgccggttc aggggacgaa gtgaccggca acgaccgcgg agttgccgcg
     1801 cccgcaacgt cgtcgtcggc ctccagcgct tgcgacgtga tttccgatta ttggcagcta
     1861 cggccaggcg ccgcaacctg cgccgcgcgc ttcccgtctc gctccgcttc tgcaaccatc
     1921 gacgtgacat ggctatgtcg caaaaggcgt gggaatcggc gcggagcctg ctcgagcgtg
     1981 ccgagcggag actcgaacgc ctgcggacgg tcgagccgta cctcatcgat ttgtcgctgc
     2041 gcgaaaacgt tttcggcgcg cgcgtcgggc agacgctggc ggacaaactc gcgattttgc
     2101 cgcggctgcg cgcgttcggc ttcaagaaca tcctgctcgg gacgctcgac tacgccctgc
     2161 ccgacgagcc cgaagtggac gacgatttca tgctccatct ccgcgagcac ggcatcgaca
     2221 tgacgggcgg cttcgcgttc accgatatcg gcagcgcgaa agaggacggc tcgttcacgc
     2281 cgtctccttc acagcgaaag ctcgcgacgt acggcgtccc caacaccctc cacgaaatct
     2341 acttgagccg cgagggcatg aaagcggcaa agtacgatct gaaggcgctg cgccgcagtc
     2401 tcccccgctc gatcgcgtgg ctgcatgagc acgtgcgcgg cgaccacggc ggcaagccgc
     2461 gcatcctgat caacatcgtg gacggctgcg atgccttttc ggacaatttc gccgagacct
     2521 gcgagatcct cgagctactc gccggacagc ccatcgaggg cgtgagcttc gaggacgatc
     2581 gcggcacgtt tctgccattt caggtgggca cgttcgtggc gatcgcccgt cgtttcttgc
     2641 cccccccact caagttgctc gtgcacatgc actcgggtgg cggcttcgag aacgcgtccc
     2701 tcatcgaagc gctgctcgag ggagcggacg gcgtgtgggg cggactaccg aaacgcgcag
     2761 cgatcatcgg ccacgcgtcg ctcggcgagc tcatcgcaaa cctggtgcgc gtcggcaatc
     2821 cgcacatgcg cgcctttcgg ctcgaggagc tcttgccgct ctcgacggcg ttacaagagc
     2881 tcgatgacaa cgcgagtgtc ccagccgatc taccgatcct cggcgcgaat gcctatcgac
     2941 tgacgttgcc gttctttcgc caagagggcg ggcgtttcat ggatctcccg ccggagacca
     3001 tcggcggcaa gtacgg
//
LOCUS       DATIML010001274         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2868323, whole genome shotgun sequence.
ACCESSION   DATIML010001274 DATIML010000000
VERSION     DATIML010001274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2868323"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /gene="coaE"
                     /locus_tag="VLJ38_22015"
     CDS             complement(<1..291)
                     /gene="coaE"
                     /locus_tag="VLJ38_22015"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736397.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HSU42280.1"
                     /translation="MHVFGLTGGLASGKGVVSARFAARGVPVVNADELAREVVAPGSP
                     GLAAVVEAFGAAVLGPGAALDRKKLAARVFAEPEARRRLEAITHPRIQALMRE"
     gene            307..1455
                     /locus_tag="VLJ38_22020"
     CDS             307..1455
                     /locus_tag="VLJ38_22020"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSU42281.1"
                     /translation="MPSIEQAFKWGMPIGRLLPLGLRSSAVAGLLLACSTLPHGAPAA
                     PAEQRGSELEQVLREAKARSGGARHAFVTVSWSYRAGAPLAAPAALGADGGVVVGSVD
                     GYLHALRPDGSFRWGYTLRGPLIGRAVVAPNGEIFAAAEPNGLYALDPDGTLAWVSSI
                     GGGVTSAPILDREARVWVTTGQGTLLGFSGHGGIVGYARVGNERMLGPAALAAGGVAI
                     ASVNGALKVAGNRSFSARMVAAAPVLELDSGPDALFVLGGEGLSRFDTPEGAERWSRG
                     DVARIACSEPTLVVVDDRGLGWLSPRGELVAHVDLALGPHRPIACLPDGELLVADEAG
                     NLVRLGQKGVRARAKLPDGRLLSLDPRSDGIVVAAYRDGRVLGLRLID"
     gene            1458..>1756
                     /locus_tag="VLJ38_22025"
     CDS             1458..>1756
                     /locus_tag="VLJ38_22025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42282.1"
                     /translation="MTFKDKLDRLGPAPPNTAPQTVAAAERSDVLAALRRKMAKILDQ
                     PAPSPRPPADPSRTSLPFVREETPAGVIHCRRLILPRSHHVGRVPVDAAFSAAPEL"
BASE COUNT          226 a          634 c          615 g          281 t
ORIGIN      
        1 ttcgcgcatg agcgcctgga tgcgcggatg ggtgatcgct tcgagccggc gtcgcgcctc
       61 gggttcggcg aagacgcgcg ctgcgagctt tttgcggtcg agcgcggcgc ccggaccgag
      121 caccgcggcc ccgaaggcct cgaccacggc ggccagtcct gggctacccg gcgcgaccac
      181 ctcgcgcgca agctcgtcgg cgttgaccac cgggacgccg cgagcagcga agcgcgcgct
      241 gacgacgcct ttaccggagg cgagtccgcc cgttagcccg aagacgtgca ccgagatgtt
      301 ccgagcttgc cctccatcga gcaagcgttc aaatggggca tgccaatcgg ccggctcctg
      361 ccactcggct tgcgctcgag cgccgtggcc ggcctgttac tcgcgtgctc cacactgcca
      421 cacggcgcac ccgccgcccc ggccgagcag cggggttccg agctcgaaca ggtacttcgc
      481 gaggcgaaag ctcgctccgg gggggcacgc catgctttcg tgacggtcag ctggtcgtac
      541 cgcgcgggag ctcctctcgc ggcgccggca gcgctcggcg ccgatggcgg ggtcgtcgtg
      601 ggttcggtcg acggttacct gcacgccctg cggccggacg gcagctttcg gtggggctac
      661 accttgcgcg gcccgctcat cggccgcgcc gtcgtcgccc cgaacggtga aatcttcgcc
      721 gccgctgagc cgaacggcct ttacgcgctc gatcccgacg gcacgctcgc ctgggtgagc
      781 tcgatcggcg gcggcgtcac ttcggcacct atcctcgatc gcgaggcgcg cgtctgggtg
      841 acgacggggc agggcacgct gctcggcttc tcgggccacg gcggcatcgt cggctacgcg
      901 cgtgtcggca acgaacgcat gctcggcccc gccgcgcttg ctgccggcgg tgtcgccatc
      961 gcgagcgtga acggcgcgct caaagtggct gggaatcgca gcttttccgc gcgaatggtc
     1021 gccgcggcgc ccgtcctcga gctcgactcg ggtcccgacg cgctcttcgt cctaggcggc
     1081 gagggccttt cgcgcttcga cacgcccgag ggtgcagaac gctggtcgcg cggcgacgtg
     1141 gcgcgcattg cgtgttcgga gccgacgctc gtcgtcgtcg acgatcgggg cctcggctgg
     1201 ctctcgccgc gcggcgagct cgtggcgcac gtcgacctgg cgctcgggcc gcaccgtccc
     1261 atcgcgtgct tgcccgacgg cgagctactc gtagccgacg aggccggcaa cctcgtgcgg
     1321 ctcggccaga agggcgtcag ggctcgcgcg aagctgccgg acgggcggct cttgtccctg
     1381 gacccgcgga gcgacggaat agtcgtcgcc gcttaccgcg acggccgcgt gctcggactt
     1441 cgcttgatcg attgagcatg accttcaaag acaagctcga tcgcctcggt ccggcgcctc
     1501 cgaacacggc gccccagact gtcgcggcgg ccgagcgcag cgacgtgctt gccgctttgc
     1561 gccgaaaaat ggcgaaaatt ctcgatcagc cggcgccgtc gccgaggccg cccgccgatc
     1621 cgagccgcac gtccttaccg ttcgtgcgcg aagagacgcc cgcgggcgtg attcattgcc
     1681 ggcgactgat cctgccgcgt tcgcatcacg tcgggcgcgt ccccgtggat gcggcgttct
     1741 ctgccgcccc ggagct
//
LOCUS       DATIML010001275         2488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3735270, whole genome shotgun sequence.
ACCESSION   DATIML010001275 DATIML010000000
VERSION     DATIML010001275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3735270"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /locus_tag="VLJ38_22030"
     CDS             complement(<1..601)
                     /locus_tag="VLJ38_22030"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HSU42283.1"
                     /translation="MKSRADIAEVARHARVSKSTVSRVINGGYASPEVRARVTKVIQK
                     LAYTPWTTARNFSLGRAGCVGFVIEDTQGQWIAQILAGIEAELTSKHISLLVGSLVIR
                     EHYDATTVTSWVRERRVDGLVFARCGKFERSLIDSARRAGIATALISPDDDFTGVDVL
                     RSDNVGAGRAVGQYLFDLGHRRIAFVGGQARVNATTFRES"
     gene            complement(602..1276)
                     /locus_tag="VLJ38_22035"
     CDS             complement(602..1276)
                     /locus_tag="VLJ38_22035"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSU42284.1"
                     /translation="MKIRSLLPLSLLLLACDEGKSHEAPVTAERSQAIQGPATQAVTT
                     PVSAPAPSPPPAPKARRAPLCGGHLDAEGRSVPKKPIGRRAAEGATEPPAEPSYQGFT
                     WVNFWAAWCVPCREEIPRLLSWQSRLGGQGKNFHVMFVSLDDDERQLAAFLGAQPASG
                     LRATYWLHEGKERVDWLAAAGVDPDPDLPQHLLVDAKGKVRCRVRGAVEDADFDALSA
                     LVGKAE"
     gene            complement(1273..2019)
                     /locus_tag="VLJ38_22040"
     CDS             complement(1273..2019)
                     /locus_tag="VLJ38_22040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42285.1"
                     /translation="MTATGAEPTPPAPAGAGGVSPLAGWLGATGVVLLLALATISVRV
                     WVSSAANRLEHPGEKPKVAIADQAEVAYCTPRFKEVLERVLHSCGLAQDETRRGCKPA
                     DVKTFASISDADFNELFTPLKERGAVILFDEGMQDLDEGAKKMLEDKWFQRKGARYFF
                     VVARASKSGNQAKNRALSHRRANSVMYYLTSIANDPEIDKKVGLLWLGNEFAQLSKDY
                     CGWPTSRANEKCDEEAINRSAFVSWVDCRL"
     gene            complement(2016..>2488)
                     /locus_tag="VLJ38_22045"
     CDS             complement(2016..>2488)
                     /locus_tag="VLJ38_22045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42286.1"
                     /translation="PTCRAFHERLVDEGVFERFDIDLVLFPLDSECNWMLDEPLHPGA
                     CIVSKAVLCGGDRVRQVLEWAYDEQVYLTRAGKAGANVLRAAIKQRWGEDLLKCVDDR
                     KTDVLLNQHLHFASDNGIPVSTPQMYLGTKRVCDEDTDMGLRFMLSELAPEVLK"
BASE COUNT          413 a          846 c          816 g          413 t
ORIGIN      
        1 tcgactcgcg gaaggtcgtg gcgttgacgc gcgcctgacc accgacgaac gcgatgcgcc
       61 ggtggccgag atcgaagagg tactggccga cggcgcgacc ggccccgacg ttgtcgctgc
      121 gcagcacgtc gacgcccgtg aagtcgtcgt cgggagagat cagcgccgtg gcgatgcccg
      181 cgcgccgcgc agaatcgatc agcgagcgct cgaatttgcc gcagcgcgcg aagacgagcc
      241 cgtcgacgcg ccgctcgcgc acccaggacg tgacggtcgt cgcgtcgtag tgctcgcgaa
      301 tcacgaggct gccgacgagc agcgagatat gcttactcgt gagctcggct tcgataccgg
      361 cgaggatttg cgcgatccat tgaccctgcg tgtcctcgat cacgaacccg acgcagccgg
      421 cgcggccgag cgagaagttt cgcgccgtcg tccacggcgt gtacgcaagc ttctggatca
      481 ccttggtgac gcgcgctcgt acctcggggc tcgcatagcc gccgttgatc acgcgcgaaa
      541 ccgtgctctt cgacacgcgt gcgtgacgcg ccacttctgc gatatcggct cggctcttca
      601 tctattctgc tttgccgacg agcgcggaga gcgcatcgaa atcggcgtcc tcgacggcgc
      661 cacgcacgcg acagcgcacc ttgcccttgg cgtccacgag cagatgctgc ggcaaatcag
      721 gatccggatc gacgcctgcc gccgcgagcc aatccacgcg ctccttgccc tcgtgcagcc
      781 aatacgtggc gcgcaaaccg ctcgctggtt gcgcgccgag gaacgcggcg agctgccgtt
      841 cgtcgtcgtc gagcgagacg aacatgacgt ggaagttctt gccctggccg ccgaggcgcg
      901 actgccacga caagaggcgc gggatctctt cgcggcacgg cacgcaccac gccgcccaga
      961 agttcaccca cgtgaagccc tgatagctcg gctcggccgg cggctccgtg gcgccttccg
     1021 ccgcgcgacg cccgatcggc tttttcggca cggagcgccc ctcggcgtcg aggtgcccgc
     1081 cgcacagcgg agcgcggcgt gctttcggcg cgggcggagg cgagggcgcg ggcgcgctga
     1141 ccggcgtcgt cacggcttgc gtcgcgggac cctgaatcgc ttgactgcgc tcggcggtca
     1201 cgggcgcctc gtgcgacttg ccctcgtcgc aggcgagcaa caggagcgac aacggcagga
     1261 gcgaacgaat tttcatagcc gacagtccac ccacgacacg aacgcgctcc ggttgatggc
     1321 ttcctcgtcg catttttcgt tggctcgaga cgtgggccag ccgcagtagt ccttcgagag
     1381 ctgcgcgaac tcgttgccga gccagagcag gccgaccttc ttgtcgattt cggggtcgtt
     1441 cgcgatgctc gtcaagtagt acatgacgga gttggcgcgc cggtgcgaca aagcccgatt
     1501 cttcgcctgg ttgccgctct tggaggcgcg ggccacgacg aagaagtaac gcgcgccctt
     1561 gcgctgaaac cacttatctt cgagcatttt cttcgcgcct tcgtcgagat cctgcatgcc
     1621 ctcgtcgaac aggatcacgg cgccacgctc cttgagcggc gtgaaaagct cgttgaaatc
     1681 ggcgtcgctg atggaggcga aggtcttcac gtcggcgggt ttgcagccgc gccgcgtctc
     1741 gtcctgagcg aggccgcagg agtggagcac gcgctcgagc acctctttga agcgcggcgt
     1801 gcagtaagcc acctcggcct gatcggcgat ggcgaccttc ggcttttcac cggggtgctc
     1861 gagccggttg gcagccgagc tcacccacac acgcacgctg atggtcgcga gcgcgagcaa
     1921 cagaacgacg ccggtcgcgc cgagccaacc cgcgagcgga gagaccccgc ctgcgcccgc
     1981 gggcgcaggc ggcgtgggct ctgcgccggt cgccgtcact tgagcacctc gggcgcgagc
     2041 tccgagagca tgaagcgcag gcccatgtcc gtgtcttcgt cgcagacgcg cttggtgccg
     2101 aggtacatct gcggcgtcga caccgggata ccgttgtcgg acgcgaagtg caggtgctga
     2161 ttcaagagca cgtcggtctt gcgatcgtcg acgcacttca agagatcctc gccccagcgc
     2221 tgcttgatcg cggcgcgcag cacgttcgcg ccggccttcc ccgcgcgcgt caggtacacc
     2281 tgctcgtcgt acgcccactc gagcacctgc cgcacgcgat caccgccgca aagcacggcc
     2341 ttcgagacga tgcaggcccc ggggtgaagc ggctcgtcca gcatccaatt gcactcgcta
     2401 tcgagcggaa acagcaccag atctatgtcg aagcgctcga acacgccttc gtcgacgagc
     2461 cgctcgtgaa acgcgcggca agtcggac
//
LOCUS       DATIML010001276         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4600433, whole genome shotgun sequence.
ACCESSION   DATIML010001276 DATIML010000000
VERSION     DATIML010001276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4600433"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="VLJ38_22050"
     CDS             complement(<1..710)
                     /locus_tag="VLJ38_22050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42287.1"
                     /translation="MAPETEARAVARSRGRLRWQLLTLACIFFALEGLTRAYAARRFI
                     PNQRLAAAVSSGDGCVVFSGGSDMVSALDLPSLLGAWQGTPPCIADLALGAASPDIRF
                     MAFREYLKAGRKPAEVVLGFKGHGLTDDPEYAPGYYTGNDAAVFEWGKLADFRIYYPR
                     PSFTAFDNSLRFLLYRSTAIGAHRQWLWLKINQLEERFGLLPSSAKNRFGNVEAFREL
                     EAETRQAMLAAREQQPTT"
     gene            complement(715..>1937)
                     /locus_tag="VLJ38_22055"
     CDS             complement(715..>1937)
                     /locus_tag="VLJ38_22055"
                     /inference="COORDINATES: protein motif:HMM:TIGR01686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IIIC family phosphatase"
                     /protein_id="HSU42288.1"
                     /translation="LELGRGQMFDPKWFSLAKLPANLNCLPEYARSLSAVIAAIHGRS
                     KKGLVLDLDGTLWGGVVGDDGIDGIRIGADSAEGESFRRFQTYLKELAARGVFLAVCS
                     KNEDAIARAAFERTDMVLKLSDIGAFAASWGTKDEAIRRIAADLNVLPESLVFVDDSP
                     AERELVRQRLPAVAVVELPADPAGYAAALARGRYFETTYVSKEDRLRVQSRSAERERS
                     ELEQRAASYDDYLASLQMRATIQPWTAAEVGRVAQLLAKTNQFNLTGRRFGDAELAAR
                     IGNPEYLSLCLHLSDRFGDHGLVSVFLARCAEPVCELENWVMSCRVFKRGAEALLFAE
                     AARELLSRGVRAVRGTLIPTERNGYVKDLFPSLGFSHLSTSPEGVETWQFELVAGAAK
                     PSPIQLTPRDARVG"
BASE COUNT          329 a          646 c          653 g          309 t
ORIGIN      
        1 ttcgtggtcg gctgctgctc acgggcggcc agcatcgcct gtcgtgtctc ggcctcgagc
       61 tcgcggaagg cttcgacgtt gccgaaacgg ttcttcgcgc tgcttggcaa gagcccgaat
      121 cgttcttcga gttgattgat cttgagccag agccactgcc ggtgcgcccc gatcgcagtc
      181 gagcgataga gcaaaaaccg caggctattg tcgaaggccg tgaaggatgg gcgcggatag
      241 taaatgcgga agtcggcgag cttgccccac tcgaacaccg cggcatcgtt gccggtgtag
      301 taacccggtg cgtactccgg gtcgtccgtg agcccgtggc ccttgaatcc gagcacgacc
      361 tcggcgggct tccgtcccgc cttcaaatac tcgcgaaacg ccatgaagcg gatgtccggc
      421 gaagctgccc cgagcgcgag atcggcgata cacggcggcg tcccctgcca ggcaccgagc
      481 aggctgggaa gatcgagcgc cgacaccatg tcggacccgc cgctaaagac cacgcaaccg
      541 tcgccgctgc tgacggcggc cgcgaggcgt tgattgggaa tgaagcggcg cgccgcgtag
      601 gcgcgcgtca ggccctcgag cgcgaagaag atgcacgcga gcgtcagcag ttgccagcgc
      661 agtcgcccgc gcgagcgtgc gaccgctcga gcctcggtct cgggcgccat cgtgtcagcc
      721 aacgcgggcg tccctggggg tcagctggat cggcgagggc ttggcggcgc cggcgacaag
      781 ctcgaattgc caagtctcga cgccctcagg gctcgtgctg aggtgcgaaa aaccgagtga
      841 gggaaacagg tctttgacgt agccgttgcg ctcggtcggg atcagggtgc cgcgcacggc
      901 gcgcacacca cggctcagca gctctcgcgc ggcctccgcg aacaagagcg cttcggctcc
      961 gcgcttgaac acgcggcagc tcatcaccca attctcgagc tcacacaccg gctccgcgca
     1021 gcgagccaaa aatacggaca cgaggccgtg atccccgaag cgatcggaca ggtgcaggca
     1081 cagcgacagg tattcgggat tgccgatgcg cgcggcgagc tcggcgtcgc cgaagcgacg
     1141 gcccgtcaga ttgaactggt tggtcttcgc gagcagctgc gcgacgcgcc ccacctctgc
     1201 agccgtccac ggctgaatcg tggcgcgcat ctggagactc gcgaggtaat cgtcgtagct
     1261 tgcggcgcgt tgctcgagct cgcttcgctc gcgttcggcg ctgcggctct gaacgcgcag
     1321 gcgatcttcc ttggacacgt aggtcgtctc gaagtagcga ccgcgcgcga gcgccgccgc
     1381 ataccccgcc gggtcggcgg gtagctcgac gaccgccact gccggcagac gctgccgcac
     1441 gagctcgcgc tccgcgggcg agtcgtcgac gaacacgagc gattcgggta gcacgttgag
     1501 gtcggctgcg atccgccgga tggcttcgtc tttcgtgccc cagctcgctg cgaaggcgcc
     1561 gatgtccgag agcttgagga ccatgtccgt tcgctcgaac gccgcgcgcg cgatcgcgtc
     1621 ttcgttcttg ctgcagacgg cgaggaacac gccgcgcgcg gcgagctcct tcaaatacgt
     1681 ctgaaaccgc cgaaagctct cgccctcggc cgagtcggcg ccgatgcgga tgccgtcgat
     1741 gccgtcgtcc ccgacgacgc cgccccagag cgtgccgtcg aggtcgagca cgaggccctt
     1801 cttggagcgc ccgtgaatcg ccgcgatcac ggcggagagg ctccgggcgt actccggcag
     1861 gcaattcaag ttcgcgggca gcttcgcgag cgagaaccac ttgggatcga acatctgccc
     1921 gcgcccgagc tcgagcg
//
LOCUS       DATIML010001277         2576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5473045, whole genome shotgun sequence.
ACCESSION   DATIML010001277 DATIML010000000
VERSION     DATIML010001277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5473045"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1017)
                     /locus_tag="VLJ38_22060"
     CDS             complement(<1..1017)
                     /locus_tag="VLJ38_22060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42289.1"
                     /translation="MTSVVASGAETLAPSSARAAHPVAEFLLVGGFTLVLFPLAWLAE
                     RGLGLDAAELAVGFTTFHAAHLVNDPHFSVTYLLFYRNARARLFGHELEWRQRLRYVF
                     AGIVAPAALVAWTVLAIAHGSARALGALSELMFALVGWHYVKQGFGVLLVLSARRGVR
                     YRPRERRVLLFHALAGAAFAWANPASAAREVEEKGVVYSALAHPRPLELVTCAGFALS
                     AVLLVLVLVQKARRERRLPPLGPLVGYLVAIWLWSVFSSLDPLMLYVIPALHSLQYLY
                     FVWLLRRNEALEAEAPPHFGRPTQERLLVLAASAVALGVLQFHFAPSLLDWARWLVPQ
                     RAPAE"
     gene            1079..2518
                     /locus_tag="VLJ38_22065"
     CDS             1079..2518
                     /locus_tag="VLJ38_22065"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSU42290.1"
                     /translation="MQEQSAFLRAAGGLSATQAAVLRPQTVAELEALFADADRQGKKL
                     TLIGSQRSFGEHFLPAVGARGVALAGLGGEVTPLEATDGDVWVRVPGALSFEALCRAM
                     PGYVPFHPPTGDRISVGGALAACSHDAVDYLATDVRAFRLLAPNGRVYECARGKPGLA
                     GELFELVPGSFGALGVILDIELRLRRIRPGECAEVRVLERRPTPGYAVVERLEQCYQA
                     QEYPLGRGLFFFGRRGPSVLLGDRIVVARPGERKRPLLLLDDATERNIVAQALANRWP
                     LPAHRMQPFVFKPDRRFRADLYAFCFYQRSYDRAHAYLSSGRSFPRLLRALGVDPWLG
                     VCHQSWVIPVDRSRAFLDLYFGVFDEFADLEARVEQQDMIRLPPCPWPLHGAYGMPGG
                     AYLLTVSISVRRGEDSERRARAFFTALSNKAHAELCVPVLLLKQAHVDDSVLRSMHRG
                     YIERLTRVKAAVDPRGVLGSRLLARLGVG"
BASE COUNT          424 a          877 c          890 g          385 t
ORIGIN      
        1 ctcagccggc gcgcgctgcg gcacgagcca gcgcgcccag tcgagcagtg acggggcaaa
       61 gtgaaactga aggacgccga gtgcgacggc cgaagcagcg agcacgagca gtcgttcttg
      121 ggtggggcga ccgaagtgcg gcggggcttc ggcttcgagc gcttcgttcc gcctgagcag
      181 ccacacgaaa tagaggtact gcagcgagtg gagcgcgggg atgacgtaga gcatcagcgg
      241 gtcgagactc gagaacacgc tccagagcca aattgccacg aggtaaccga cgagcggccc
      301 gaggggcggg aggcggcgct cgcgtcgcgc tttttggacg agcacgagca cgagcagcac
      361 ggcgctcagc gcgaatccag cgcaggtgac gagctcgagg gggcgcggat gagcgagcgc
      421 gctgtaaacg acgccctttt cctcgacttc acgcgcggct gacgcgggat tcgcccacgc
      481 gaaagccgcg ccggcgagcg cgtgaaagag caagacgcgg cgttcgcgcg gccgatagcg
      541 cacgccccgc cgcgccgaga ggacgagcag cacgccgaag ccctgcttca cgtagtgcca
      601 gccgacgagc gcgaacatga gctcgctgag cgcgccgagc gcgcgggccg aaccgtgcgc
      661 gatcgccagc accgtccagg cgacgagcgc ggcgggcgca acgatgccgg cgaaaacgta
      721 gcgtaagcgt tgccgccact ccaattcgtg cccgaacagc cgcgcgcgcg cgttccggta
      781 aaacagcagg tacgtcacgg aaaagtgcgg atcgttgacg aggtgcgcag cgtgaaaggt
      841 cgtgaagccg acggcgagct cggccgcatc gagccccagg ccgcgctcgg cgagccaggc
      901 gagcggaaag agcacgagcg tgaagccacc gacgagcaag aattccgcga ctggatgcgc
      961 cgcccgcgcc gatgaaggag cgagcgtttc ggcaccggac gcgacgacgc tcgtcacgtt
     1021 ccgacgataa cacgcggggg actccgcgcg cgtccgcccg cttcgctagg atgcgcgcgt
     1081 gcaagaacaa tcggctttcc tacgcgccgc gggtgggctc tctgccacgc aagcggcggt
     1141 gctgcgcccg cagaccgtcg cggagctcga ggcgctcttc gctgacgcgg atcgccaggg
     1201 caaaaagctc acgctgatcg gctcgcagcg ttcgttcggc gagcacttct tgccggcggt
     1261 tggagcgcgt ggcgtcgcgc tcgcgggact cggcggcgag gtgacgccgc tcgaagcgac
     1321 ggacggcgac gtttgggtgc gcgtgcctgg cgcgctttcg ttcgaagcgc tctgccgcgc
     1381 aatgcccggc tacgtcccat ttcacccgcc gaccggcgat cgaatctccg tcggcggcgc
     1441 gctcgccgcc tgctcgcacg acgcggtcga ttatttggcg acggacgtgc gcgcgttccg
     1501 gctgcttgcg ccgaacggtc gcgtctacga gtgtgcgcgc ggcaagccgg gcctcgcagg
     1561 cgaactcttc gagctcgtgc cggggtcgtt cggagcgctc ggagtcatcc tcgacataga
     1621 gctacgcctg cggcgcatcc gccccggcga atgcgccgaa gttcgcgtgc tcgagcgccg
     1681 ccccacgccg ggctacgccg tcgtcgaacg gctcgagcag tgttaccaag cccaggagta
     1741 tccgctcggg cgcgggctct tcttcttcgg gcggcgcggg ccgagcgtgc tgctcggcga
     1801 tcgcatcgtc gtcgcacggc ccggcgaacg aaagcggccg ctgctgctgc tcgatgacgc
     1861 gacggagcgc aacatcgtcg cccaagcgct cgctaatcgc tggcccttgc cggcgcaccg
     1921 catgcagccg ttcgttttca agccggaccg gcgtttccga gccgacctct acgccttttg
     1981 cttctatcag cggagctacg atcgcgcgca cgcttacctc tcgagcgggc gctcgttccc
     2041 gcgtctgctg cgcgccctcg gcgtcgaccc ctggctcgga gtctgccatc aaagctgggt
     2101 catcccggtg gaccgcagcc gcgcgttcct cgatctttac ttcggcgttt tcgacgaatt
     2161 cgccgacctc gaagcgcgcg tggagcagca ggacatgatt cgcttgccgc cctgcccttg
     2221 gccccttcac ggcgcctacg gcatgcctgg cggcgcgtac ctactcaccg tcagcatcag
     2281 cgttcggcgt ggcgaagaca gcgaacgccg ggcgcgcgcg ttcttcaccg cgctcagcaa
     2341 caaagcgcac gccgagctct gtgtgcccgt gctcctgctc aaacaagcgc acgtcgatga
     2401 cagcgtcttg cgctccatgc atcgcggcta catcgagcgg ctcacgcggg tgaaagcagc
     2461 ggtcgatccg cgcggcgtgc tcggctcgcg gcttttggcg cgacttggcg tgggatgacg
     2521 gcgaacgacg cgctcaccgc acgaacgcgg acatctgcgc cacgtcctcg cggagg
//
LOCUS       DATIML010001278         2038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2580600, whole genome shotgun sequence.
ACCESSION   DATIML010001278 DATIML010000000
VERSION     DATIML010001278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2580600"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..1914)
                     /locus_tag="VLJ38_22070"
     CDS             complement(136..1914)
                     /locus_tag="VLJ38_22070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42291.1"
                     /translation="MTQRGGTVRPEALFIGMGALGLVACGEDASNKHWSELATCLAGP
                     AASAPVAERVPKIRQVMLGNPPGATSNDAWPKRCAPYADELYASLDSSGKPSLLKRKL
                     HERFGCTDTKGSCAIANDTALVSTTTEVWEAANGAELKLAPATNVTAPPAAPPAAVDA
                     KSWKSFSDKPLHVSGPVLTGDGRALVALKPTEGRARPKACEFAPGFSKVRCVQANDKV
                     PELPPQSIEIVNSDKGLFAAGLTEQGLVAYDLETGDTSAVGGRAGRLVRDGVVVERAA
                     KEDIGAGPPDPTKPEPKAKGGKAKAKAKAPAKPSKKSPMLSKPTGAAPADEGFVALEL
                     TNGKASKPVKLPLTAPVGEPITLGNQILALIPAEGGAELAVKSLSHGRLKDGGTLKGN
                     FAGSFHTCRKGDSYAFATYAGHNGQGSAKATGGDGKTQVTFSMLEANGWSKPAAATMP
                     FDRTGESELVCNASGASIAWFKGEKNAATVGRIDCKADGCKSSEVKLPSFDSSYLWSV
                     TPLGDKVMLLYRSSVGETRLRLAPLADLPTAKDSIVFDTGDYGGPPTGDLAVLASDSA
                     ALLLFRGDQPVALRVGSDGSVSVVSS"
BASE COUNT          276 a          663 c          718 g          381 t
ORIGIN      
        1 cggagtggga tagcgccgac ctgacgcgcg ggcgccgccg cttacagttg cacagcggct
       61 ccgtgcgatg gctcggctgg aacggcgcgg gcgtttgtct tcgaacgccc gcgccccagc
      121 ggtcgcccct caagcctacg aagatacgac gctcacgctg ccgtcgctgc cgacgcgcag
      181 tgcgaccggc tgatcgccgc ggaacaagag gagcgctgcg ctgtcgctcg cgagcacggc
      241 gagatcgccc gtgggcggtc cgccgtaatc gcccgtgtcg aacacgatgg agtctttggc
      301 ggtcggcaaa tcggcgagag gcgcgagacg aaggcgcgtt tcgccgacgc tcgaacggta
      361 gagcaacatc actttgtcgc cgagcggcgt gacgctccag aggtacgagc tgtcgaaact
      421 cggcagtttc acttcgctcg atttgcagcc gtccgccttg cagtcgatgc ggcccacggt
      481 cgccgcgttc ttttcgccct tgaaccaggc gatgctcgcg ccgctagcgt tgcagacgag
      541 ctccgactcg ccggtgcggt cgaacggcat cgtcgcagcg gccggcttcg accagccgtt
      601 cgcctcgagc atgctgaacg tcacttgcgt cttgccgtcg ccgcccgtcg ctttcgcgct
      661 gccttgaccg ttgtggccgg cgtacgtcgc gaacgcgtag ctgtcgcctt ttctgcaggt
      721 gtggaagctg cccgcgaagt tgcctttgag cgtgccgccg tccttgagcc ggccgtggct
      781 gagcgatttg acggcgagct cggcgccgcc ctcggctgga atgagcgcca ggatttgatt
      841 accgagcgtg atgggctcgc cgacgggcgc ggtgagcggc agcttgacgg gcttggatgc
      901 tttgccgttc gtgagctcga gcgcgacgaa gccttcgtcc gcgggggcgg cgcccgtcgg
      961 cttgctcagc atcggggact tcttgctcgg cttggcggga gccttggctt tggctttggc
     1021 tttgccgcct ttagccttgg gctcgggctt ggtgggatcg gggggacctg cgccgatgtc
     1081 ttccttcgcg gcgcgttcca cgacgacacc gtcgcgcacg agccggcccg cgcgtccgcc
     1141 gaccgcggag gtatcgccgg tctcgaggtc gtaggcgacg agcccctgct cggtgagtcc
     1201 ggcggcgaag agccctttgt cgctattgac gatctcgatg ctctgcggtg gcagctccgg
     1261 caccttgtcg ttcgcttgca cgcagcgcac cttggagaag cctggcgcaa actcgcacgc
     1321 tttggggcga gcgcgaccct ccgtcggttt gagcgcgacg agcgcgcggc cgtcacccgt
     1381 gagcacgggg cctgaaacgt ggaggggctt gtcgctgaag ctcttccagc tcttggcgtc
     1441 gacggcggcc ggcggcgcgg cgggcggggc cgtgacgttc gtcgcgggcg cgagcttgag
     1501 ctcggcgccg ttcgctgctt cccagacctc ggtcgtcgtc gagacgagcg ccgtgtcgtt
     1561 cgcgatggcg cagctgccct tcgtgtcggt gcagccgaaa cgctcgtgga gtttacgctt
     1621 gaggagcgac ggcttgcccg agctgtcgag ggatgcgtag agctcgtcgg catacggcgc
     1681 gcagcgcttc ggccaggcgt cgttgctcgt cgctccgggc ggattgccga gcatcacctg
     1741 acggattttc ggcacgcgct cggcgacggg cgcgctcgct gccgggcccg cgaggcacgt
     1801 cgcgagctcg ctccaatgct tgttcgacgc gtcctcgccg caagccacga ggccgagcgc
     1861 ccccatgccg atgaacagag cttcgggtcg aaccgtgccg cctcgttgag tcatgggggc
     1921 ggaccataac gcccaactcg ggtctagtgc acgaacttcg acaacaggcg aatgtaagcg
     1981 atctgatagc cgtcgtccgg ctccgtgacg gaccaggagt cgaggggcca actggtgt
//
LOCUS       DATIML010001279         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1428363, whole genome shotgun sequence.
ACCESSION   DATIML010001279 DATIML010000000
VERSION     DATIML010001279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428363"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VLJ38_22075"
     CDS             complement(<1..757)
                     /locus_tag="VLJ38_22075"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSU42292.1"
                     /translation="MRLCRFGPQGAERPGVALPDGSHLDVSSFGEDYGERFFGSDGVT
                     RLAGWLAKHASSCPPLLPNERLGPCVMRPCKLVGVGRNYRAHAAEVGGEVPAEPILFM
                     KAPSAVSGPYDDVLLPPGSTQTDWEVELAVVIGRVARHVTVAHALEHVAGYALFNDYS
                     ERSFQRERGGQWTKGKSADSFAPIGPYLVTDGVDPASLELWLSVNGVERQRAFTSGMI
                     FDVPTLVAYVSEFMTLLPGDVIATGTPEGVGSGQ"
     gene            complement(754..>1711)
                     /gene="galE"
                     /locus_tag="VLJ38_22080"
     CDS             complement(754..>1711)
                     /gene="galE"
                     /locus_tag="VLJ38_22080"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HSU42293.1"
                     /translation="IRRVRRAGHPVVALDSLSRGHREALPPDVPFVECDVGDRERVRA
                     ALVEHQIDCVMHFAAFAYVGESVGQPLLYYRNNTAGTLGLLEAMQAAGVKRLVFSSTC
                     ATYGEPESMPIHEELPQSPINPYGWSKLFSERMMRDLCLAAPDFSCVALRYFNVAGSA
                     EDASIGEDHEPETHLIPVILQALAGVREKISVHGDDYPTPDGTCIRDYVHVEDLADAH
                     VVAMERLKPGFAYYNVGIGRGHSVKEILAAAEAVVGRAPAYEIGPRRAGDPPVLYADP
                     SKIQRELGWRATRTDIREAIGNAWGWFQRRPRGYASAGKDRP"
BASE COUNT          290 a          618 c          535 g          268 t
ORIGIN      
        1 tttggcccga ccccacgccc tcgggcgtgc ccgtcgcgat cacatcgccc ggcaagagcg
       61 tcatgaattc actcacgtac gccacgagcg tcggcacgtc gaaaatcatt ccactcgtga
      121 acgcgcgctg ccgctcgact ccgttgacgc tgagccaaag ctcgaggctc gccggatcca
      181 ccccgtccgt caccaggtac ggtccgatcg gcgcgaaaga atcggcgctc ttgcccttcg
      241 tccactgccc accgcgctcg cgctgaaacg agcgctcgct gtaatcattg aacagcgcat
      301 agcccgccac gtgctcgagc gcgtgcgcca ccgtcacgtg acgcgcgact cgtccaatca
      361 cgaccgcgag ctcgacctcc caatccgtct gcgtcgaacc gggcggcaac agcacgtcgt
      421 cgtacggccc cgacacggcg ctcggcgcct tcatgaacaa aatgggctcg gcgggcacct
      481 cgcctccgac ctcggcggca tgcgcgcggt aattccgtcc gacaccgacg agcttgcagg
      541 gccgcatcac gcacggcccg agtcgctcgt tcggtagcag cggcgggcag ctgctcgcgt
      601 gtttcgcgag ccagcctgcg aggcgcgtca cgccgtccga gccgaagaaa cgttcgccat
      661 agtcttcgcc gaagctcgag acgtcgaggt gcgacccgtc gggcagcgcc acgcctggtc
      721 gctcggcccc ctgcggaccg aagcgacaca gcctcacggg cgatccttgc cggcgctcgc
      781 gtaaccacgc ggccggcgct gaaaccagcc ccaagcgttg ccaatcgctt cgcgaatgtc
      841 ggtgcgcgtc gcccgccagc cgagctcgcg ctggatcttc gacgggtcag cgtagagcac
      901 tggcggatcg cccgcccgcc gcggcccgat ctcgtaggcc ggcgctcgac cgaccacggc
      961 ttccgcggcg gcgaggatct ccttgacgct gtgaccgcgg ccgatgccca cgttgtaata
     1021 cgcaaagcca ggcttcagcc gctccatcgc gaccacgtgc gcgtccgcga gatcttcgac
     1081 gtgcacgtag tcgcgaatgc acgtgccgtc cggcgtcggg taatcgtcgc cgtgcaccga
     1141 aatcttttcg cggacgcccg cgagcgcctg caaaatcact gggatgaggt gcgtctccgg
     1201 ctcgtgatcc tcgccgatgc tcgcgtcctc ggccgagccc gcgacgttga agtaacggag
     1261 cgcgacgcac gagaaatccg gcgcggcgag gcagagatcc cgcatcatgc gctcggagaa
     1321 gagcttcgac caaccgtacg ggttgatggg cgattgcggg agctcttcgt gaatcggcat
     1381 ggattcaggc tccccgtacg tcgcgcaggt cgagctgaat acgagccgct tcacccccgc
     1441 ggcctgcatc gcctcgagca gccccagcgt gcctgccgtg ttgttccgat agtaaagcag
     1501 cggctgtccg accgattcgc cgacgtacgc gaaggcagca aaatgcatca cgcagtcgat
     1561 ctggtgctcg acgagggccg cgcgcacgcg ttcgcgatcg cccacgtcgc actcgacgaa
     1621 cggcacgtcg ggcgggagcg cctcccggtg tccgcggctc aaactgtcga gcgccacgac
     1681 gggatgtcca gcgcggcgca cgcgtcggat g
//
LOCUS       DATIML010001280         1647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1428625, whole genome shotgun sequence.
ACCESSION   DATIML010001280 DATIML010000000
VERSION     DATIML010001280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428625"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..690)
                     /locus_tag="VLJ38_22085"
     CDS             complement(<1..690)
                     /locus_tag="VLJ38_22085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42294.1"
                     /translation="MIGSNQSPGDVVASPSAEPPPAVLPEQVSEAAAAAPAPLPPKRP
                     GVFRRTFEWFWQRRALAALRAEGRIGSPRARELLRRAWVCLELADRAVRPVPALPSGP
                     GDAPARELARQAVFWGLAAEEAVRAGSSTEDGAAVAIPSFEALWGRADARLLAGAAGG
                     EGAVHALEAALKTEGFADFAELSREEQARQARDLTTFARTLLATIEAPRVSVDRIYFR
                     RVVRTGGLCFLL"
     gene            829..>1647
                     /locus_tag="VLJ38_22090"
     CDS             829..>1647
                     /locus_tag="VLJ38_22090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSU42295.1"
                     /translation="MKPLVKKILVGTGTVIGAVLVGGGAFVAVQVRAFAASTDKVYDV
                     PVPHVTRSSDAIVLARGKHVAESLAPCAVSDCHGPDLGGGRTVEIGPLGKFTAPNISA
                     GGLGVTYSDGELMRLLRHGIKRDGRSVRFMPSHEFNWLSDDDFSAVISYVRSLPPVQK
                     SNGPCEVGVLGKVLDRRDMVPLDIARRIDHARIELAPPASPTAAYGAFIARECTGCHG
                     KTLSGGPIPGAPPELPIPRNLTPHQTGLNGWSFDDFRHTLSTGVSKSGKKLADMM"
BASE COUNT          263 a          594 c          549 g          241 t
ORIGIN      
        1 gagcaagaag cagagtccgc ccgtgcgcac cacgcgccgg aagtagatcc tgtcgacgct
       61 cacgcgcgga gcttcgatgg tcgcgagcag cgtgcgcgcg aacgtcgtga ggtcgcgcgc
      121 ctgccgagct tgctcttcgc gtgaaagctc cgcgaagtcg gcgaagccct cggtcttgag
      181 tgccgcttcg agcgcgtgca cggcgccctc gcccccggcc gctcccgcga gcaacctggc
      241 gtcggcgcga ccccatagcg cttcgaaact cgggatagcg accgcggccc cgtcttccgt
      301 cgagctgccc gctcgcacgg cttcttccgc cgcgagcccc cagaacacgg cctgccgcgc
      361 gagctcacgc gcgggggcat ccccggggcc cgacgggagc gctggcacgg gccggaccgc
      421 gcggtcggcg agctcgagac acacccaagc tcggcgcagg agctcgcgcg ctcgcgggga
      481 cccgatgcgc ccctcggcac gcagggccgc gagcgcgcga cgctgccaga accattcgaa
      541 cgtccggcga aaaacgccag gccgcttcgg cggcagcggc gcaggtgccg cagccgcagc
      601 ttcggacacc tgctcgggca ggacggcggg cggcggctcc gcggacggcg acgcgacgac
      661 gtcgccgggg ctctgattgg aaccgatcac gctcgctctg actccggcgc gggaagctaa
      721 gcaagcagca ccccccgggt caagacgccg cgtcccccac gccggctcgg cccgggattc
      781 gctctctatt cagcgcaggg caggacgggt aaattcgccg gctaacccgt gaagccactc
      841 gtcaagaaga ttctcgttgg taccggcacc gtgatcgggg ccgtcctcgt gggcggcggc
      901 gcgttcgtcg cggtccaggt gcgcgccttc gcggcgagta cggacaaggt gtatgacgtg
      961 ccagtcccgc acgtcacgcg ctcgtccgat gcgatcgtgc tcgcgcgcgg caaacacgtc
     1021 gccgaatcgc tcgcaccctg cgcggtgagc gactgtcacg gccccgatct gggcggcggc
     1081 aggaccgtgg agatcggacc cctcggcaag ttcaccgcgc ccaacatctc cgccggaggg
     1141 ctcggtgtca cgtactcgga cggcgagctc atgcgcctgt tgcggcacgg catcaagcgg
     1201 gacggccggt cggttcgctt catgccctcg cacgaattca actggctgag cgacgacgat
     1261 ttttcggctg tcatttcgta cgtgcggtcg ctcccacccg ttcaaaagag caacggcccg
     1321 tgcgaggtcg gcgtgctcgg caaggtcctc gaccggcgtg acatggtccc gctcgatatc
     1381 gcgcgccgca tagatcacgc tcgaatcgag ctcgcaccgc cggcgtcgcc cactgcggcg
     1441 tacggggcgt tcatcgcacg cgagtgtacc ggctgccacg gtaagacact ttcgggcgga
     1501 cccattcccg gcgcgccccc cgagctgccg atcccgcgga acctcacgcc gcatcaaacc
     1561 gggctcaatg gttggagctt cgatgatttt cgccacaccc tcagcacggg cgtcagcaaa
     1621 tcaggcaaga agctcgccga tatgatg
//
LOCUS       DATIML010001281         3988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1428838, whole genome shotgun sequence.
ACCESSION   DATIML010001281 DATIML010000000
VERSION     DATIML010001281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428838"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VLJ38_22095"
     CDS             complement(<1..693)
                     /locus_tag="VLJ38_22095"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
                     /protein_id="HSU42296.1"
                     /translation="MSTVHLVGGEKGGVGKSVVARLLAQSFIDRGVRFAALDADQSHG
                     ALARSYAEFSQPVDLGRLESADQILDRALGADRRVLVDLPAQSHRALKRWIDATDVLA
                     YAREMDVRVVLWHVTDGGFDSVAHLDRLLEDFGASIEYVVVKNEGRSKDFSQLEASAT
                     YQRLLALGGRAVTLPELDSAIMYKLDRFGSSFWAAVNASEGERALTTLERRRAKLWLE
                     RAEILLQQVEELG"
     gene            complement(841..2769)
                     /locus_tag="VLJ38_22100"
     CDS             complement(841..2769)
                     /locus_tag="VLJ38_22100"
                     /inference="COORDINATES: protein motif:HMM:NF013400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42297.1"
                     /translation="MRFAALAALTFALTPACDTASPSDDSGSSLSGSGGTGAHSAGGS
                     GGTTGGTTPTGAGTGASAARGGTTAAGGSSAGAAPHAGSGGTGGLNAGSGGTSGGAGS
                     QGFAGAPQPMVSCMGSFDTASVSGTQSSVTVDSSSNKGNLPHFWDTFGTGEMPLFLRT
                     DRNWGQTLKDHVTDGVQNLGVKRLRQHGLFHDDIGIYHEDSSGNPTYDFSKSDEIFDF
                     FVKLGIEPIVELAPMPHDLAADPSKTVFDWNMIVSVPKDYARWQELITKFVQHSIERY
                     GQDVVNTWYFEVWNEPECCMNKFWSGSIDDYFKLYDYTAAGVLAALPSGRVGGPVSSQ
                     PAELTKNSMVGQKFLQHVTTDNYVNPGHPGSLGFFAYHSWSFLDGSVNGYFQARDLLD
                     SFNLQDTNIAITEYGPTWEFGLTDEPQETEQGATFAVQTYADIVQRCTKDNRRLPIAY
                     SWWVLSDIFDESMYREDDPFIGCMGLTSRENIHKPVYNAYKFLAQLGTQQVAFNISGA
                     AGLGGMAARSPDGGVQLIVYNGQNPGKGPSNETYYQSAGATSVGVTVSGLDPQFPFDV
                     TAYHVDHTVGNAYTVWQNQGRPNMTTMLDADWQGLRDAMDSPAEPLGRALCGSTFTHS
                     FELTSPGVLFVKFAPAAP"
     gene            3180..>3988
                     /locus_tag="VLJ38_22105"
     CDS             3180..>3988
                     /locus_tag="VLJ38_22105"
                     /inference="COORDINATES: protein motif:HMM:NF025316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4215 domain-containing protein"
                     /protein_id="HSU42298.1"
                     /translation="MPTSGSPSSAGDAGRTADGGGGGYILPPPVGGVGGDQPPSCGDA
                     MHADGEECDDANLLPGDGCTGDCRVEDGWSCPDVGPCTRLCGNGAFDRSETCDDGNTL
                     SGDGCSADCQVERGWLCPAPGRACRGACGDGFVVSGEACDDGNRVSGDGCSSACLKEA
                     LCGGAGAEHEAGGEGGGANGGAAGAFGGGNGGGSSSSEPCLPECGDGIAQAPEECDLG
                     TVQNDGSYGGCTPDCRYASFCGDGVVDAPDEECDDELNLTPYTMAQETGCAP"
BASE COUNT          636 a         1250 c         1423 g          679 t
ORIGIN      
        1 gccgagctcc tcgacctgct ggagcaaaat ctccgcgcgc tcgagccaca gtttggcgcg
       61 gcggcgttcg agcgtcgtca acgcgcgctc tccctcgctc gcgttgaccg ccgcccaaaa
      121 gctcgagccg aagcgatcga gcttgtacat gatcgcggag tcgagctccg gcagcgtgac
      181 cgctcggccg ccgagcgcga gcaggcgctg gtacgtcgcg gacgcctcga gctggctgaa
      241 gtccttcgag cggccttcgt tcttgacgac gacgtattcg atggacgcgc cgaaatcctc
      301 gagcagccgg tcgaggtgcg cgaccgagtc gaacccgccg tcggtgacgt gccagagcac
      361 gacgcggaca tccatctcgc gggcataggc gagcacgtcg gtcgcgtcga tccagcgctt
      421 gagcgcgcga tggctttgcg ccggcagatc gacgagcacg cgccgatcgg cgccgagcgc
      481 gcgatccaag atttggtcgg cgctctcgag gcgtccgaga tcgactggtt gcgagaactc
      541 ggcgtagcta cgcgcgagcg cgccgtgtga ctgatcggcg tcgagcgccg caaagcgcac
      601 gccgcgatcg atgaacgact gcgcgagtag ccgcgcgacg acgctcttgc ctactccgcc
      661 cttttccccg ccgacgagat gtacggtgct catgcgcgtt cctttcgtcc ggcgagcgcg
      721 tgaagtcaag gcgcgcgcgt cgacttcacg ccgcaacaat cggcaacgga atacgaaaca
      781 gagcggcgct cggctcgagt taggcgatgt tcgggtgttc cgagaccgct cgactcgagg
      841 ttacggcgcc gccggcgcga acttcacgaa caagacgccg ggcgacgtga gctcgaacga
      901 gtgcgtgaac gtgctgccgc aaagcgcgcg accgagcggc tcggcgggcg agtccatggc
      961 gtcgcgtagc ccttgccagt cggcgtccag catcgtggtc atgttgggac ggccctggtt
     1021 ctgccacacg gtgtaagcgt taccgaccgt gtgatcgacg tgatacgcgg tcacgtcgaa
     1081 ggggaattgt gggtcgaggc ccgagacggt gacaccgacc gaagtggcgc ccgccgattg
     1141 atagtaagtc tcgttgctcg ggcccttgcc ggggttttgg ccgttgtaga cgatgagctg
     1201 cacgccgccg tcggggctgc gcgctgccat gccgccgagg cccgcggcgc cgctgatgtt
     1261 gaacgcgact tgctgcgtgc cgagctgcgc caggaatttg taggcgttgt aaaccggctt
     1321 gtggatgttc tcgcgactcg tgagacccat gcagccgatg aaggggtcgt cctcgcggta
     1381 catcgactcg tcgaagatgt cggaaagcac ccaccacgag tacgcgatgg gcaggcggcg
     1441 gttgtccttg gtgcagcgct ggacgatgtc ggcgtaggtc tgcacggcga acgtcgcgcc
     1501 ttgctccgtt tcctgcggtt cgtccgtgag accgaactcc catgtcggcc cgtactcggt
     1561 gatcgcgatg ttcgtgtctt gcagattgaa gctgtcgagc agatcgcgag cctggaagta
     1621 accgttgacc gagccgtcga gaaagctcca gctatggtac gcgaagaagc cgagggagcc
     1681 ggggtggccg gggttcacgt agttgtcggt cgtgacgtgc tgcaaaaatt tctggccgac
     1741 catggagttc ttggtgagct cggcaggctg gctgctgacg gggccgccca cgcgtccgct
     1801 cggcagcgcg gcgaggacgc ccgccgccgt gtagtcatac agcttgaagt aatcgtcgat
     1861 gctgccggac cagaacttgt tcatgcagca ttcgggctcg ttccagacct cgaaatacca
     1921 ggtgttcacc acgtcttgcc cgtagcgctc gatgctgtgt tgcacgaact tggtgatgag
     1981 ctcttgccag cgcgcgtagt ccttggggac cgagacgatc atgttccagt cgaacacggt
     2041 cttgctcgga tcggccgcga ggtcgtgcgg catcggcgcg agctcgacga tgggctcgat
     2101 gccgagcttc acgaaaaagt cgaagatctc gtccgacttc gagaagtcgt aggtgggatt
     2161 gccgctgctg tcttcgtggt agatgccgat gtcgtcgtga aagagcccgt gctggcggag
     2221 ccgcttgacg ccgaggttct gcacgccgtc ggtgacgtga tctttcagcg tctggcccca
     2281 gttgcgatcc gtgcgcaaga acagaggcat ctcgcccgtg ccgaaggtgt cccagaagtg
     2341 ggggaggttg cccttgttgg agctcgagtc cacggtcacg ctgctctgcg tgccgctcac
     2401 ggacgcggtg tcgaagctcc ccatgcacga caccatcggc tgcggcgcgc ccgcgaaacc
     2461 ctggctgccc gcgccgcccg aagtgccgcc gctgcccgcg ttcaggccgc cggtgccacc
     2521 gctgcctgca tgcggcgcgg cgcccgcgct cgaaccgccc gctgccgtcg tgccgcctcg
     2581 agcggcactg gcaccggttc cagcgccggt gggcgtggtc ccgccggtgg tgccgcccga
     2641 cccgcccgcg ctgtgcgcgc cggtcccgcc actaccggac agggaggaac cggaatcgtc
     2701 ggagggcgat gcggtgtcgc acgcgggagt cagcgcgaag gtgagcgcgg ctagagcagc
     2761 gaagcgcaat gaacgagggg aagaggcaag caagggaggt gctgcgagca tgggtccgtt
     2821 tgggtttagc aggtccgggc gacctggcgc agcatcacgt gacctttggc gccggctcgc
     2881 gccggtattg ctggaatgat ccactgttgc gcgccgcaaa gagctccgat ccccggcgct
     2941 ggttgcccgg gaattgttag gatcgcgctc ggctcgaacg acatgcattt actaacgctg
     3001 ctctggtcgg cgaacgcgct cttgcgcgcg ggctgcacgg aggtccgtta gtgtctgctc
     3061 ggctgcgctg gagagaaccg ttggcggcgg gcgtggtttg gctcgcgctg gttccgctcg
     3121 cgtgcgggcg ttccgtgcgg tccgacgaga cgagtcgctc agcaggcggt ggcgcaccca
     3181 tgccgacgag cggaagcccg agctcggccg gggacgccgg tcgaacggct gacggcggcg
     3241 ggggcgggta catcctgccg ccgcctgtag gcggggtggg tggtgaccag ccgccgtcct
     3301 gtggcgacgc catgcacgcc gacggcgaag aatgtgacga cgccaatctt ctcccaggcg
     3361 atggctgtac cggcgattgt cgtgtcgagg acggctggtc ttgccctgac gtaggtccct
     3421 gcacacgact ctgcggcaac ggcgcattcg accgctcgga gacctgcgac gacggcaaca
     3481 cgctgtccgg cgacggctgc agcgcagact gccaggtcga acgcggctgg ctctgtccgg
     3541 cgccgggccg cgcttgccgc ggcgcgtgcg gcgacggctt cgtggtgagc ggcgaagcct
     3601 gtgacgatgg gaaccgcgtg agcggcgacg gctgctcgag cgcatgcctg aaagaggcgc
     3661 tctgcggcgg cgcaggagcg gagcacgaag ctggtggcga gggcggcggc gcgaacggcg
     3721 gcgcggcagg cgctttcggc ggcggcaacg ggggcggcag ctccagcagc gagccatgcc
     3781 tgcccgagtg cggagacggg attgcccaag cgcccgagga atgcgatctc ggaacggtgc
     3841 agaacgacgg cagctacggc ggttgcacgc cggactgccg ctacgcctcg ttctgcggcg
     3901 acggcgtcgt cgacgctccg gacgaggagt gcgacgacga gctcaacctg actccgtaca
     3961 ccatggcgca agagaccggc tgcgcgcc
//
LOCUS       DATIML010001282         1973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4314721, whole genome shotgun sequence.
ACCESSION   DATIML010001282 DATIML010000000
VERSION     DATIML010001282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4314721"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VLJ38_22110"
     CDS             <1..813
                     /locus_tag="VLJ38_22110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSU42299.1"
                     /translation="GERASPVGFAGPKRFQPIPVPISALPPLDAVVISHDHYDHLDYP
                     TILELARFEVPFFTSLGVGAHLEAWGVPAERITELDWWERAELSHGGLSITAAPSQHF
                     SGRGLGGRNATLWSSLVLQTERASVFFSGDTGLTSEYSEIKERLGPFDLAMLEVGAFH
                     PAWGDIHLGPENALKAAALLGAQRFLPVHWGTFNLAMHAWDEPAETLVALAPDYGAEL
                     VMPLLGEPAEPSHVEGVDTWWRSLRRGHTAVDTVEEPQSVPPGAESVPWPLD"
     gene            917..1276
                     /locus_tag="VLJ38_22115"
     CDS             917..1276
                     /locus_tag="VLJ38_22115"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSU42300.1"
                     /translation="MSPSNERRALPREPAHLAAVIELEGREIGCGISRDASGSGLLLF
                     THVHIAEGSAVTLQLFFPQEEQPRRVDAAVIRTERTRPEERIVWDYRMAVALRNPPGD
                     LQELVQRITRRPPGAAP"
     gene            complement(1291..>1973)
                     /locus_tag="VLJ38_22120"
     CDS             complement(1291..>1973)
                     /locus_tag="VLJ38_22120"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HSU42301.1"
                     /translation="GADALETDVHLTQDDEIVAVHDPDGSRVAGTPRSVRSAALREVQ
                     SWDAGHSFVAADGGRPFVGRGFRIPSLTELLGELPPIRLNIDLKSEEPRLVERFIEVV
                     RRHGAEGRVVAASFQAGTLAHLRARGWRGESSLARREFIACWLLPGWLRRSRPPGTRA
                     QIPTRSGPVPLATRATLAKLHRIGLAVDFWTINDPDEARRLVALGADGIMTDDPARIV
                     PAVRGAGG"
BASE COUNT          291 a          708 c          663 g          311 t
ORIGIN      
        1 ggcgaacgag cgtcgcccgt cggcttcgct ggtcccaaac gctttcaacc catccccgtc
       61 ccgatcagcg ctctgcctcc gctcgatgcc gtcgtgatct cgcacgacca ctacgatcac
      121 ctcgactacc cgacgatcct cgagctcgct cgcttcgagg tcccgttctt cacgtcgctc
      181 ggcgtcggag cgcacctcga agcctggggg gtccccgccg aacgcatcac ggagctcgac
      241 tggtgggaac gcgccgagct ttcgcacggc ggcctttcga tcaccgccgc gccctcacaa
      301 catttttccg ggcgtggtct cggcggacgt aacgccacgc tctggtcgtc gctcgtgctg
      361 caaaccgagc gcgcctcggt cttcttcagc ggcgacaccg gtctcacctc cgaatactcg
      421 gagatcaagg agcgcctggg cccgttcgat ctagccatgc tcgaggtcgg cgccttccat
      481 ccggcctggg gcgatattca cctcggcccg gagaacgcgc tcaaagccgc cgccctcctc
      541 ggcgcgcagc gcttcttgcc cgttcattgg ggcaccttca acctggccat gcacgcttgg
      601 gacgagccgg ccgaaacgct cgtcgctctc gccccggatt acggcgcgga gctcgtgatg
      661 cccctcctcg gcgagccggc cgagccttcg cacgtcgagg gcgtcgacac ttggtggcgc
      721 tcgcttcggc gaggccacac ggcggtggac accgtggaag agccgcagtc ggttccacct
      781 ggggccgaaa gcgtgccctg gccgctcgac tgactcgccg agaactcgac tggctcgccg
      841 aaaaaccggg cgagaacgag ctcgcgcgtg gcgaagctgg tcggagcgag cgaggcgcgc
      901 taaattaggg gatcgcatgt ccccatcgaa cgagcggcgc gccctgcccc gtgagcctgc
      961 acacctcgcc gcggtgatcg agctcgaggg tcgtgaaatc gggtgcggaa tctcgcgcga
     1021 cgcgagcggg tcgggcctgc tcctgttcac ccacgtgcac atcgccgagg gctcggccgt
     1081 cacgctccag ctgttctttc cgcaggaaga gcagccgcgc cgtgtggatg ccgccgtcat
     1141 tcgtacggag cgcactcgcc ccgaggagcg catcgtctgg gattaccgca tggcggtcgc
     1201 gctgcggaat cctccgggcg atctgcagga gctcgtgcaa cgcatcacgc ggcgcccgcc
     1261 gggcgcggcg ccctagtccc ccgcggcgcc ctagccgccc gcgccgcgca ccgcgggcac
     1321 gatgcgcgcc ggatcgtcgg tcatgatgcc atccgcgccg agcgcgacga ggcggcgcgc
     1381 ttcgtcggga tcgttgatgg tccaaaagtc gacggcgagt ccgatgcggt gaagcttcgc
     1441 gagcgtcgcg cgggtcgcga gcgggaccgg tccggagcgc gtcgggattt gagcccgcgt
     1501 gccgggcggc cgtgaacgcc ggagccaacc cggcaggagc cagcacgcga tgaactcgcg
     1561 ccgcgcgagc gagctctcgc cacgccagcc gcgcgcgcgg aggtgcgcga gcgtgccggc
     1621 ttggaagctc gccgccacga cgcgaccttc ggctccatgg cgccgcacga cctcgatgaa
     1681 gcgttcgacg agtcgtggtt cctcggattt cagatcgatg ttcaggcgaa ttgggggcag
     1741 ctcgccgagg agctccgtga ggctcggaat acggaagcct cggcccacga aggggcgccc
     1801 gccgtccgct gccacgaaag agtgcccggc gtcccagctc tgcacctcgc gcagcgccgc
     1861 gctacgcacc gaacgcggcg tcccggcgac gcggctcccg tcggggtcgt gaacggcgac
     1921 gatttcgtcg tcttgcgtga gatgcacgtc ggtttcgagc gcgtcggcgc cga
//
LOCUS       DATIML010001283         3454 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_850794, whole genome shotgun sequence.
ACCESSION   DATIML010001283 DATIML010000000
VERSION     DATIML010001283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3454
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_850794"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1999)
                     /locus_tag="VLJ38_22125"
     CDS             complement(<1..1999)
                     /locus_tag="VLJ38_22125"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020733307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HSU42302.1"
                     /translation="MKRKVEGSKGAARGTVSGPSKQKRAPGDAAAKKMAATDATARAM
                     PFNAAKSAEHGRAALDPVVGQAVPPADPSVTASTLTELTPSDKVGSGRPPHSFNPGNA
                     PLDRVRTDGSERALTTNQGVFVADNQNSLKLGARGPVLLEDFILREKITHFDHERIPE
                     RVVHARGSAAHGFFECYRPLGDLTRASIFAEKGKQTPVFVRFSTVIGERGSPDTPRDV
                     RGFAVKFYTDEGNWDLVGNNIPVFFIQDAMKFPDLIHAAKPEPHFQIPQAATAHDTFW
                     DFVSLMPESTHMLMWAMSDRALPRSYRMMQGFGVHTFRFVNAKGKSTFVKFHWSPRLG
                     THSLVWDESLKICGADPDFHRRDLWEAIEAGEFPEWELGVQLFSEKDAERFSFDVLDA
                     TKIVPEELVPVTPIGRMVLNRNPDNFFAETEQVAFCTAHVVPGIDFSNDPLLAGRIHS
                     YVDTQISRLGGPNFHEIPINSPIAQTHNNQRDGMHRQAIHRGRVAYEPNSLGGGCPFQ
                     AGSTGFSSFRQPIEGDKVRAKPERFAEHYAQATLFYRSQSPAEQRHIQNAFRFELTKV
                     QVPAVRERVVSMLLNVDAELAKGLAEDLGLEVPKPMPRALKNAPKPEVERSPALSLMA
                     RPGDGGVRTRRVAILVANGSDGEAAQASYAGLSAAGALPRYV"
     gene            complement(2279..3061)
                     /locus_tag="VLJ38_22130"
     CDS             complement(2279..3061)
                     /locus_tag="VLJ38_22130"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSU42303.1"
                     /translation="MGIQTRPLAIVTGASSGIGLELARVAVQHFDLLIAADEPAINEA
                     QASLGRVGSVEALEVDLATPEGVQQLYDAARGRPIAALMANAGRGLGRAFLDQEWPDI
                     QRVIDTNIVGTVDLVHKVGREMRDRGSGRILITGSIAGFMPGTFQAVYNGTKAFLDSF
                     SYALRAELKDSGVTVTCLMPGATETDFFERADMMDTKVATGKKQKPDEVARLGFEAML
                     RGEGDVVTGWDNKLRAAIAKIAPSGAMAEQHRKMAAPGTAEK"
     gene            complement(3177..>3454)
                     /locus_tag="VLJ38_22135"
     CDS             complement(3177..>3454)
                     /locus_tag="VLJ38_22135"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HSU42304.1"
                     /translation="HGDEELYRSGYSPEALRRWARRVRAYAAGGEPKDATRFDGPAVV
                     RPRGRDVFVYFDNDVKVHAPFDAKALALAAAAAPRIDRRGSRRAGQG"
BASE COUNT          537 a         1114 c         1182 g          621 t
ORIGIN      
        1 tcacgtagcg gggtagggct ccggcggcgc tcagcccggc gtacgacgct tgcgcggcct
       61 cgccgtcgct gccgttggcg acgagaatgg cgacgcgtcg cgtgcgcact ccgccgtcgc
      121 cggggcgcgc catcagcgat aatgcgggag aacgctccac ttccggtttg ggcgcgttct
      181 tcagcgcgcg cggcatcggc ttcggcactt cgagaccgag gtcctcggcg agtcccttgg
      241 cgagctcggc gtcgacgttg aggagcatgg agacgacacg ctcgcgcacg gccggcacct
      301 gcaccttcgt gagctcgaag cggaacgcgt tctggatatg ccgttgctcg gcgggcgatt
      361 gactgcggta aaagagcgtc gcctgcgcgt aatgctccgc aaaccgttcc ggcttggcgc
      421 gcaccttgtc accctcgatc ggttgacgga aggagctgaa gcccgtgctc cccgcttgga
      481 aggggcagcc tccgccgagg gagttcggct cgtaggcgac gcgtccgcgg tggatggcct
      541 gccggtgcat gccgtcgcgc tggttgttgt gcgtctgcgc gatcggagag ttgatgggga
      601 tctcgtggaa gttcgggccg cccaggcgtg aaatttgggt atcgacgtag gaatggatgc
      661 ggcccgcgag cagcggatcg ttcgagaagt cgatgccagg tacgacgtgc gccgtgcaaa
      721 acgccacctg ctcggtctcg gcgaagaagt tgtcggggtt tcgattgagc accatgcggc
      781 cgatgggcgt cacgggcacg agctcttccg gtacgatctt ggtcgcgtcg agcacgtcga
      841 agctgaagcg ctcggcgtct ttctccgaga agagctgcac gccgagctcc cactctggaa
      901 attcgccggc ctcgatggct tcccacaaat cccgccggtg aaagtccggg tcggctccgc
      961 agatcttgag cgactcgtcc cagacgagcg agtgcgtgcc gagcctgggc gaccagtgaa
     1021 acttcacgaa cgtcgatttg cccttggcgt tcacgaagcg gaaggtgtgc acgccgaagc
     1081 cctgcatcat gcggtagctg cgcggcagcg cgcgatccga catcgcccac atgagcatgt
     1141 gcgtcgattc cggcatgagc gacacgaagt cccagaacgt gtcgtgtgcc gtggccgctt
     1201 gcgggatctg aaagtgcggc tcgggcttgg ccgcgtgaat caggtccgga aacttcatcg
     1261 cgtcttggat gaagaagacc ggaatgttgt tgccgacgag atcccagttg ccttcgtccg
     1321 tgtagaactt cacggcgaag ccgcgcacgt cgcgcggcgt gtccggggag ccgcgctcgc
     1381 cgatcaccgt cgaaaacctc acgaaaacgg gcgtctgctt gcccttttcg gcgaaaatcg
     1441 acgcgcgcgt gaggtcgccg agcggccggt agcattcgaa gaagccgtgt gctgcggagc
     1501 cgcgcgcgtg cacgacgcgt tccggaatgc gctcgtgatc gaagtgcgtg atcttctcgc
     1561 ggaggatgaa atcctcgagc aagaccgggc cgcgcgcacc gagcttcagc gagttttggt
     1621 tatcggcgac gaagacgcct tgattggtcg tgagcgcgcg ctcgctgcca tccgtgcgga
     1681 cgcgatcgag cggcgcgttg cctgggttga aggaatgggg cgggcggccg ctgccgacct
     1741 tgtcggaagg cgtgagctcg gtcagcgtgc tggccgtgac ggacgggtcg gcgggcggca
     1801 cggcctgacc gacgacaggg tcgagcgcgg cgcggccatg ttcggcggat ttcgccgcat
     1861 tgaacggcat cgcgcgagcc gtcgcgtcgg tagccgccat tttcttggct gccgcgtcgc
     1921 ctggagcccg cttctgtttc gacggtccgc tcacggtccc gcgtgcggcg cctttcgagc
     1981 cctcgacttt gcgcttcatg ccgatcttcg tattccgagc tctcgccatg cgtttccccg
     2041 tttgcgggcc gcaacacgcg gccgagcagg tcgggctgcg cgaagcaatt cctgcgccgc
     2101 gaaccacagc gacgaaagtg ctcgtttttc agggtcggtc acgcgcgagc gccccgcagc
     2161 atcgcctcgg gcgcggcatt ttcgcgcggg gcgccagagc gtgagtgcgg tgcggtaggc
     2221 ccgctgagcc ggcgtgcaca cgcggtgacg cgcggctcgg caggacaggc cgacgcgtct
     2281 acttctcggc ggtgccgggg gccgccatct tgcgatgttg ctcggccatc gcgccggacg
     2341 gagcgatctt ggcgattgct gcgcgcagct tgttgtccca gcccgtgaca acgtcgccct
     2401 caccgcggag catggcctcg aatccgagcc gtgcgacctc gtccggcttc tgcttcttcc
     2461 cggtggccac cttggtgtcc atcatgtcgg cgcgctcgaa gaagtcggtc tcggttgcgc
     2521 ccggcatgag acacgtgacc gtcacgccgc tgtccttcaa ctcggcccgc agggcgtaag
     2581 agaaggagtc gaggaacgcc ttcgtgccgt tgtaaacggc ttggaaggtg ccgggcatga
     2641 agcccgcgat agaccccgtg atcaggatgc gaccggagcc gcgatcgcgc atttcgcggc
     2701 cgaccttgtg taccagatcg actgtcccca cgatattcgt gtcgatcacg cgttgaatgt
     2761 cgggccattc ctgatcgaga aacgcccggc cgaggccacg gccggcgttg gccatcagcg
     2821 ccgcgatggg tcggccccgt gcagcgtcat acaactgctg cacgccctcg ggcgtggcga
     2881 gatcgacctc cagggcttcc accgaaccga cgcgaccgag cgacgcctga gcctcgttga
     2941 tggcgggctc gtccgccgca atcaataggt caaaatgctg caccgccacg cgcgcgagct
     3001 cgagcccgat acccgaggaa gcgccggtga cgatggcgag tggacgagtt tgaataccca
     3061 tgacgttctc cttcgtgcgc gctgacagag cgctcgtctc ggctgctacg catgggccgc
     3121 gccatcacgg cactgggtgt tccccgccct tggagacgct cgcgcggtct tgccgctcag
     3181 ccttgccccg ctcgtcgcga tccgcgacgg tcaatccgcg gcgccgccgc cgctgcgagg
     3241 gcgagcgcct tggcgtcgaa cggcgcgtgg actttgacgt cattgtcgaa atacacgaaa
     3301 acatcgcgcc cccgcgggcg cacgacagcg ggaccgtcga aacgggtcgc gtccttcggc
     3361 tcaccgcctg ccgcgtaggc acgcacgcgg cgcgcccagc ggcgcaatgc ctccggcgag
     3421 tagccgctgc ggtagagctc ttcgtcgccg tgca
//
LOCUS       DATIML010001284         2317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4020071, whole genome shotgun sequence.
ACCESSION   DATIML010001284 DATIML010000000
VERSION     DATIML010001284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4020071"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1443
                     /locus_tag="VLJ38_22140"
     CDS             <1..1443
                     /locus_tag="VLJ38_22140"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HSU42305.1"
                     /translation="RDLFGDQTAPASKYLAEDQYTPFDNDYTLQRASQALVDSLSAFA
                     EDVATRAVAADQRAKVVPCKPSGAGDTDCFQQTVSTLGRRLFRRELTSAEIAPYLALQ
                     AFATEDNPAVPHDFYTGVALVLESMLQDPEFLYRLETGTPGADAAVLALDDYEIATRL
                     SFLLWGSTPDDALLAAAKASRLSDPSGRRAEAERLLGDQRARDALHRFHAMWLGYRAI
                     PGSADLLASFDAETKHLIDRVVFDEPASYLTLFTSSETYLDDRLAEQYGLPHPTGGAG
                     WVSYGSSGRAGILSHGSVLAAFSKFSDTSPTQRGIFVQTRLLCNVVSPPPANVNVDQP
                     PSAPDAVCKADRYAAHRSSSSCAACHSNLDPIGLGLEAYDIGGRFRTHDDGHAECPIS
                     GDGELPDYGTFNGPAELGQKLVDSGRLERCFVQQFLDYAMGRPLRSGEDGVVDAVASD
                     FKDQNYDAQSLLLDYVASERFALRREEPAP"
     gene            1440..>2317
                     /locus_tag="VLJ38_22145"
     CDS             1440..>2317
                     /locus_tag="VLJ38_22145"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HSU42306.1"
                     /translation="MTFVLPRRTLLRALGGIAVGLPVLECMLNRHGDAYAASGAIPLR
                     YAIVFAGQALGGDGWEDDKSQVMGTRITQSGDFIVPAETGATYTPTTPLGPLVDKNLL
                     GDFSLVSGLKIPFSASSVEAADVPAGGAFRDFHGGGAGPLLCGTRSQSSSFTCRSATS
                     DQILAQGMKGAALASLVVRAQPAWYLSGSSFSGRQYISYAGGGDPVEAQVSPGIVYRS
                     LFDGFTPGTSAEDAQHDFDVRARTSVLSLILDKRDKLLARVGAADRARLERHFDEIRD
                     LETRISAMPATSGGAC"
BASE COUNT          359 a          851 c          736 g          371 t
ORIGIN      
        1 cgcgacctct tcggcgatca aaccgcgccc gcgtcgaagt acctagccga agaccaatac
       61 actccgttcg acaacgacta cacgctccag cgcgcctccc aagcgctcgt cgattcactc
      121 tccgcgttcg ccgaggacgt agcgacgcgc gccgtcgccg ccgatcagcg cgccaaagtc
      181 gtcccctgca agccttccgg cgcgggcgac accgactgct tccagcaaac ggtgtcgacg
      241 ctcgggcggc gcctgtttcg gcgcgagctc acgagcgctg aaatcgcgcc gtatctcgcg
      301 ctccaagcgt tcgcgaccga ggacaatccg gccgttccac acgattttta caccggcgtc
      361 gcgctcgtgc tcgaaagcat gctgcaagat ccggagttcc tctatcggct cgaaaccggg
      421 acgccgggtg cggacgcggc agtgctcgcg ctcgacgatt acgagatcgc gacgcggctt
      481 tcgttcctgc tctgggggag cacgccggac gacgcgttgc tcgctgccgc caaggcgtcg
      541 cgcttgagcg atccctcggg ccgtcgcgcc gaggcggagc gcctgctcgg cgaccagcgc
      601 gcccgcgacg ctctgcaccg cttccacgcc atgtggctcg gttatcgcgc aatcccgggc
      661 agcgctgacc tgctcgcgtc gttcgatgcg gagaccaagc acctgatcga ccgcgtcgtg
      721 ttcgacgaac ccgcgagtta tctcacgctc ttcacgtctt ccgagacgta cctcgacgat
      781 cgcttggccg agcaatacgg cttgccacac ccgacgggcg gcgcggggtg ggtgagttac
      841 ggctcgagcg ggcgcgcagg gatcttgtcg cacggcagcg tgctcgcggc gttcagcaag
      901 ttctcggaca cgagcccgac ccagcgcggc atcttcgttc agacacggct gctctgtaac
      961 gtcgtctcgc cgccgcccgc caacgtgaac gtcgatcaac cgccgagcgc ccccgacgca
     1021 gtctgcaagg ccgaccgcta cgccgcgcac cgctcctcct cgagctgcgc ggcctgccac
     1081 agtaacctcg accccatcgg cctcggcctc gaagcttacg acatcggcgg ccgcttccgc
     1141 acgcacgacg acggtcacgc cgagtgcccc atcagcggcg acggtgagct cccggactac
     1201 ggcaccttca acggcccggc ggagctcggg cagaaactgg tcgacagcgg caggctcgag
     1261 cgctgtttcg tgcagcagtt cctcgactac gcgatgggac gcccgctgcg ctccggcgaa
     1321 gacggcgtcg tcgacgccgt cgcgtccgat ttcaaagacc aaaattacga cgcgcagtcg
     1381 ctcttgctcg attacgtcgc gagcgagcgc ttcgcgctgc gccgcgagga gcccgcacca
     1441 tgacgttcgt attgccgcgc cgcacgctgc tgcgcgccct cggcggcatc gccgtcggtt
     1501 tgccggtgct cgagtgcatg ctgaaccgcc acggcgacgc ctacgcagcg tccggcgcga
     1561 tcccgctgcg ctacgcgatc gtcttcgcgg ggcaagcgct cggcggcgac ggctgggagg
     1621 acgacaagtc gcaggtgatg ggcacgcgca tcacgcagag cggcgacttc atcgtgcccg
     1681 ctgagaccgg cgcgacctac acgccgacga ccccgctcgg cccgctcgtc gacaagaatc
     1741 tgctcggcga tttcagcttg gtgtccggcc tcaagatccc cttcagcgcg agctccgtcg
     1801 aggcggcgga cgtgcccgcg ggcggcgcct ttcgtgactt tcacggcggc ggcgccgggc
     1861 cgctgctctg cggcacgcgc tcgcagagct cgagcttcac ctgccggagc gcgacctcgg
     1921 atcaaatcct cgcgcagggg atgaagggcg cggcgctcgc ctcactcgtc gtgcgcgcgc
     1981 agcccgcttg gtacttgagc ggctcgagct tttctggccg ccagtacatc tcgtatgcgg
     2041 gcggcggcga tccggtcgaa gcgcaggtga gtcccggcat cgtctaccgc tcgctcttcg
     2101 acggcttcac gccggggacg agcgccgagg acgcccagca cgacttcgac gtccgcgcgc
     2161 ggacgagcgt cctctccctc atcctcgaca agcgcgacaa attgctcgcg cgcgtcggcg
     2221 ccgccgatcg cgcgcgcctc gagcggcatt tcgacgaaat tcgcgatctc gaaacccgca
     2281 tcagcgcgat gccggcgacg agcggcggcg cctgcca
//
LOCUS       DATIML010001285         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_268864, whole genome shotgun sequence.
ACCESSION   DATIML010001285 DATIML010000000
VERSION     DATIML010001285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268864"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..>1578
                     /locus_tag="VLJ38_22150"
     CDS             124..>1578
                     /locus_tag="VLJ38_22150"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HSU42307.1"
                     /translation="MKLESKRFLRGPNRWSDKTSVEGVLRLDPSQPLADSWKRLLSDY
                     PELMAKVSAGAPRDTDSALFWAHVVGRLAVELQSNARIDVTLALASQLDAPREARFVV
                     EYREEASGERAVELAFELIAAAGEGRRVDVASELETLRKLHEETRLGPSTGAIASAAR
                     ARGIPVRRLTEGSLLQLGYGAQQRRVWAAETDRTSAIGEAIAQDKELTKQMLALVGVP
                     VPEGRPVESAEEAWAAAQAVGLPVAVKPRKGNQGKGVSIRLHTREAVMSAYEIAAEYD
                     RYRQVVVERHIEGVDFRLLVIGGRLVAAARREPPSIVGDGASTIAELVAVENKNPLRG
                     DDHSTALSKLRLDEIGLETLAEQGLTADSVPAAGQTVVLRRNANLSTGGSATDVTDEV
                     HPLVARRAIEAARVVGLDIAGIDLVGSRVDLPLEETGGAFVEVNAAPGLRMHLEPSHG
                     RGRAVGEAIIESMFARGDDARIPIVAVTGTNGKTT"
BASE COUNT          263 a          510 c          594 g          211 t
ORIGIN      
        1 gggggtcgca ctcggtatga cagccgaggc ggtaaagagc ggtttttcta acgaattcga
       61 tgggcgtacg gccaaggatc ccgaacggga agctgccggc gccgcgaccg taggatgatg
      121 gcgatgaaac tcgaatccaa acgtttcctc cgaggcccga accgctggtc cgacaagacc
      181 tcggtggaag gcgtgctcag gctcgacccg tcgcagccgc tcgccgactc gtggaagcga
      241 ctgctctccg actaccccga gctcatggcg aaggtttcgg ccggcgcgcc gcgcgacacg
      301 gactcggcgc tgttctgggc acacgtggtc ggtaggctcg cggtcgagct tcagagcaat
      361 gcgaggatcg acgtgacgct cgcgctcgcc tcgcaactcg atgcgccgcg cgaggcacgt
      421 ttcgttgtgg agtatcgcga agaggcaagc ggcgagcgcg ccgtcgagct cgcgttcgag
      481 ctcatcgccg cggcgggtga ggggcggcgt gtcgatgtcg cgagcgagct cgagacgctc
      541 cgcaagctgc acgaagagac gcggctcggc ccgagcacgg gcgcgatcgc cagcgcggcg
      601 cgcgcgcgcg gcatccccgt gcggcgcctg acggaaggca gtctgctcca gctcggttac
      661 ggcgcgcagc agcgccgcgt gtgggccgcg gagaccgacc gcacgagcgc gatcggcgaa
      721 gccatcgccc aggacaagga gctcacgaag cagatgctcg cgctcgtcgg cgtgccggta
      781 cccgaagggc ggcccgtcga gagcgcggaa gaagcttggg cggcggcaca agcggtcggt
      841 ttgccggtcg cggtgaagcc acgcaaaggc aaccagggta aaggcgtgtc catccggctc
      901 cacacgcgcg aagcggtgat gagcgcgtac gagatcgccg ccgagtacga tcgctaccgc
      961 caggtggtgg tcgagcgcca catcgagggc gtggatttcc gcttgctggt gatcggcggg
     1021 cgcttggtcg ccgcggcgcg gcgcgagccg ccgagcatcg tcggcgacgg cgcgagcacg
     1081 atcgcggagc tcgtcgcggt cgaaaacaag aacccgctgc gcggcgacga tcactcgacg
     1141 gcgctcagca agctccggct cgacgagatc gggctcgaga cgctcgccga gcaggggctc
     1201 acggcggaca gcgtgccggc cgcgggccag accgtggtcc tgcgccgcaa cgcgaacctg
     1261 agcacgggcg ggagcgcgac ggacgtgacg gacgaggtgc acccgctcgt cgcgcgacgc
     1321 gcgatcgaag ccgcgcgtgt ggtggggctc gacatcgcgg gcatcgatct cgtcggctcg
     1381 cgcgtcgatc tgccgctcga ggagacgggc ggcgcgttcg tcgaagtgaa tgcggcgccg
     1441 gggctgcgca tgcatctcga gccctcgcac ggccgcggtc gcgccgtggg tgaggcgatc
     1501 atcgagtcca tgttcgcgcg cggcgacgac gcgcggatcc cgatcgtggc cgtcacgggc
     1561 acgaacggca agacgacg
//
LOCUS       DATIML010001286         1657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3159657, whole genome shotgun sequence.
ACCESSION   DATIML010001286 DATIML010000000
VERSION     DATIML010001286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3159657"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..>1657
                     /locus_tag="VLJ38_22155"
     CDS             180..>1657
                     /locus_tag="VLJ38_22155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42308.1"
                     /translation="MSSPEIRAKPLRTPLGRVLRRLWAMGRPLPLFALLCGWLHEYAS
                     APEAARREVEPARSLVLALAQLGLSADPTQVLLLPDQTPRGAVTRHERAVVLARRPGE
                     LADVYLVAARRAPEGNLLEISSTHNLTDTSAADEQGLVVSGNRAAWAVTQDGKVHAIY
                     LADFAGEPRPTGREWTAARRFQDALTNLQETGQWAGIGRRSFKLDPPASRVALGLTQE
                     ALLIDSDAHRVRVALGGGPPTDHRAVEQTPRKARPGSLVTWAVDRVRALPWFGDRNMQ
                     LLKAVAFEASDELDQIVSHVSREDANQAVAEEIGELYAAPTSDATDPETGWPPAPLEP
                     MLSPALKGEGKWVRLDGDPFVGKNPGAPAPFVFSFIRTDRKRIYSQVFVTLWDPRQIE
                     LHPVSGTVEPKSATGERGTGEIPRRPEVMGRLVGALNGGFQAMHGEFGMMADRVTYLP
                     PKPYAATIALMADGATGFGTWPEVSPVPRDMVSFRQNLTPLVV"
BASE COUNT          284 a          565 c          556 g          252 t
ORIGIN      
        1 cgggctcaca ccaaaaaatc cagtaaaatc cactagatga cacagagagc ccggctcgct
       61 cgacaattgt gttgtctaag tgcgccaact tcgttgtcgt ggcgccgaca cgcaacgaag
      121 gccctcgaga aatgggccaa aaaggggcgg cggtgttaag cgaaggctcg gaatcgtcca
      181 tgtcgagccc cgagatccgc gcgaagccac tgcgcacgcc gctcgggcgg gttttgcgcc
      241 ggctctgggc gatgggacgg ccgctgccgc tcttcgcgct gctctgcggc tggctccacg
      301 agtacgcgag cgcgccggaa gcggcgcggc gcgaagtcga gcccgcgcgt tcgctcgtac
      361 tcgctctcgc gcagctcgga ttgagcgccg atccgacgca ggtcctgctc ttgccggacc
      421 aaaccccgcg cggtgccgtg acacgccacg agcgtgcggt ggtgctcgcg cgccgtccgg
      481 gtgagctcgc ggacgtgtac ctcgtggcgg cccggcgcgc acccgaggga aacttgctcg
      541 agatctcgag cacgcacaat ctcaccgaca cgtcagccgc cgatgagcaa gggctcgtcg
      601 tgagcggcaa tcgtgcagcc tgggccgtca cgcaagacgg caaggtccac gccatctacc
      661 tcgcggactt tgccggcgag ccccgaccga caggacgcga atggacggcc gcacggcgct
      721 tccaagacgc actcacgaat ctccaagaaa ccgggcagtg ggcgggcatc gggcgccgct
      781 ccttcaagct cgatccgccc gcgtcgcgcg tcgcactcgg cctgacgcag gaggcgctgc
      841 tcatcgactc cgacgcgcac cgcgtgcgcg tcgcgctcgg gggcggccca ccgactgatc
      901 accgcgcggt cgagcagacg ccgcgcaagg cgcgccccgg tagcctcgtc acgtgggcgg
      961 tggatcgcgt gcgcgcgctg ccctggttcg gtgatcgcaa catgcagctc ttgaaggccg
     1021 tcgcgttcga ggcgagcgac gagctcgatc agatcgtgag ccatgtctcg cgcgaagacg
     1081 caaaccaagc cgtggccgaa gaaatcggcg agctctacgc ggcgcccacg agcgacgcga
     1141 cggaccctga gacgggctgg cctcctgcgc cgctagagcc gatgctgagc cccgcgctca
     1201 agggtgaagg caagtgggtc cgcctcgacg gcgatccgtt cgtcggcaag aaccccggcg
     1261 ctccggctcc cttcgtgttc tcgttcattc gcaccgatcg caagcgcatc tactcgcaag
     1321 tcttcgtgac gctctgggat ccacggcaaa tcgagcttca tcccgtgagc gggaccgtcg
     1381 agcccaagag cgcgaccggc gagaggggga cgggcgaaat cccgcgccgg cccgaggtca
     1441 tggggcgctt ggtcggtgcg ctgaacggcg ggttccaagc catgcacggc gagttcggca
     1501 tgatggccga ccgcgtcacg tacctgccgc ccaagccgta tgcggcaacc atcgcgctga
     1561 tggcggacgg agcgacggga ttcggcactt ggccggaagt gtcgcctgtc ccccgcgaca
     1621 tggtttcgtt tcgtcagaat ctgacgccgc tcgtggt
//
LOCUS       DATIML010001287         5451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2582362, whole genome shotgun sequence.
ACCESSION   DATIML010001287 DATIML010000000
VERSION     DATIML010001287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5451
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2582362"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1386
                     /locus_tag="VLJ38_22160"
     CDS             55..1386
                     /locus_tag="VLJ38_22160"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU42309.1"
                     /translation="MPEDSDAEALPVYVIESIPVGGPNEIPAAEIKIEGIPTPAHLKL
                     YPELGRGGMGRIHPATDRNLLRHVALKRLAKELVTEAFYRDGFVAEAQITGQLEHPNI
                     VPVHELALDEHGVPYFTMKLVQGQGFHQWLREPGRPPGTTQRLEEGLEIFLKVCDAIA
                     YAHHRGVIHRDLKPDNIIVAGFGQVYVMDWGLARLTRTRPASGSNAQMEAPGPVGTPA
                     YMSPEQARGNPREMDERSDVFGLGAILYEIVCGFTPFGPEIDADRIIELSRAGRVIPI
                     EQQARGVGISKRLRNIVMKAVQPRPTDRYQSVAELRDDVRSFLLGGLHLPRRAHAAGE
                     LIIREGEAGDAAYIIVSGQCRAFRQIGEQQETLETMGPGDVFGEMALLLDEPRYASVE
                     AMEPVTLLVVDRATLTEGLGVEGWTGALVRALAERFRALEATVRSSGLRRG"
     gene            1419..2234
                     /locus_tag="VLJ38_22165"
     CDS             1419..2234
                     /locus_tag="VLJ38_22165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42310.1"
                     /translation="MASYDSARGCYVVRVVYDGPGMAGKTTNLRKICEFVPATRRGEL
                     VTPAELRGRTMFFDWLEVDGPSRAPAPIKLQLVSVPGQIERNYRRRPLVEAADVVVFV
                     CDASPAQLPDTMRAFARLRGTMKLRKKPIPLVVQVNKQDVEGAIGPDRMIKKLKLAEG
                     TSVLPASAEQGTGVKETLALATRHALQVLGRRELEPLLAELANADALFDHVLTFEDAP
                     HDGPVDAEELYIGAEEVDAEGAAAAAHLAASSLDALEAKAKRAAKRSREHGAS"
     gene            complement(2241..3170)
                     /locus_tag="VLJ38_22170"
     CDS             complement(2241..3170)
                     /locus_tag="VLJ38_22170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42311.1"
                     /translation="MVELIERSVVHYALNDPRTARGGVESFAQNLGSVFREVLFMTPK
                     TQDLALVRERRLPVICDNQWVLDWPTDIPVIGFQHGVMLKKYFALRQGELVALVRRQA
                     RAAKRKNTLWVACARWISDTFARLHGNRAAHVIYHAVDLERFDGRLDNVGSRLVLHDG
                     RFRHKGSLVYPRLAQAFPDYSFEPLGCTPAEVPERMRRARAFMHLSSYEGNSIVCNEA
                     MAMNLPCLFTRVGLALDGEPLDIASIPRSFVYGPLAPFRSRSLLHAVDAFLKSLGTRS
                     YEPRRWIEANASLSATRASWALALSSFDALPWA"
     gene            3203..3997
                     /locus_tag="VLJ38_22175"
     CDS             3203..3997
                     /locus_tag="VLJ38_22175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42312.1"
                     /translation="MSQTIRALGTAPFSRSALQEKIPEFLGLLAERPFEDNHGGMRAP
                     HLFATWVMVQALEPTHIVESGVFKGLGTWLLERAAPHARLYCIDPDPQSRLYHSSRAE
                     YFTRDFSELDWDLPRDKTLLFFDDHQDALARVVLAERLGFVHLVFEDNYPSGRGDCYS
                     LKKAFMGEPAPRRQNLLARARHVFEGPSPAEREPARYLERTLETYFEFPPVRRAMTTR
                     WADAWSDERYPTPPALFDSPGEPSDPFVAEARDYTWICYARLRAAR"
     gene            complement(4031..4285)
                     /locus_tag="VLJ38_22180"
     CDS             complement(4031..4285)
                     /locus_tag="VLJ38_22180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42313.1"
                     /translation="MATDGALSKHERAESYARQAAEAERRGDHLRAAVLYRAAFIALE
                     STGEGEQLESNRGHDARRQWSAGGDTARAAAAADCSNEAE"
     gene            complement(4404..>5451)
                     /locus_tag="VLJ38_22185"
     CDS             complement(4404..>5451)
                     /locus_tag="VLJ38_22185"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HSU42314.1"
                     /translation="EGRARHSAGLQVVRTIGLTLATLVPLALKTSVGTVIVVYAVVRW
                     SFGLLLLWEFKYLYGHVERVPSPLGVRALFAFALPLGATEALGQVNAQLDRWLILFAL
                     PGTRFADYQAGAWQVPIVGTIAYSVGAAYTPELVRLFQAREPYAALQLWQRGIHKVTL
                     IVVPITMALVIGADELMPLMFTKAYASAVDIFRCYSVLTFLRVAAFGTVIVAAGKPGL
                     VVRAAALGLLYNALFGIPLVLTLGFIGPALGAALAFLLHVVTYVYFISRAAEVPMSRV
                     FPVRNYLRVFALACIAGAAGFAVKRALHVPAPVLLGLEITTVLGVFALLGSVTKTIEP
                     GDWRFLKDWLKLKH"
BASE COUNT          948 a         1874 c         1782 g          847 t
ORIGIN      
        1 ctagaaggct ggaggccccc agggaaccgg tgtagcgtga ggcggttatt ggctatgcct
       61 gaagacagcg acgccgaggc gctccccgta tacgtcatcg agtccattcc cgtcggcggc
      121 ccgaacgaaa ttcccgccgc ggaaatcaag attgaaggga tcccgacacc cgcgcacttg
      181 aagctctatc ccgagctcgg acgcggcggc atggggcgca tccaccccgc caccgatcgc
      241 aacctcctca ggcacgtggc gctcaagcgc ctcgccaagg agctcgtcac ggaggccttc
      301 tatcgcgacg gtttcgtggc cgaggcgcag atcaccggcc agctcgagca cccgaatatc
      361 gtgcccgtgc acgagctcgc gctcgacgaa cacggcgtcc cctacttcac gatgaagctc
      421 gtccagggcc agggctttca tcagtggctg cgcgagcccg ggcgcccccc gggcacgacc
      481 cagcggctcg aggaaggcct cgagattttt ctcaaggtct gcgacgccat cgcctatgcc
      541 caccaccgcg gcgtcattca ccgcgatctg aagccggaca acatcatcgt cgcgggcttc
      601 ggccaagtgt acgtgatgga ttggggcctc gcgcgcctca cccgtactcg ccccgcttcc
      661 ggttccaacg cgcaaatgga ggcgcccggc cccgtcggga caccggctta catgtcgccc
      721 gagcaagcgc gcggcaatcc gcgcgagatg gacgaacgct cggacgtctt cggcttgggc
      781 gcgatcctgt acgaaatcgt gtgtggattt acgccgttcg ggccggaaat cgacgccgat
      841 cgcattatcg agctttcgcg cgccgggcgc gtgattccca tcgagcaaca agcgcgcggc
      901 gtcggtatct ccaagcgcct tcgcaacatc gtgatgaagg ccgtgcagcc gcggcccacc
      961 gatcgctatc agtcggtcgc ggagctcagg gacgacgtcc gcagtttctt gctcggcggg
     1021 ctccatttac cgcgccgcgc gcacgccgcc ggcgagctca tcattcgcga aggcgaagcg
     1081 ggcgacgcgg cgtacatcat cgtgagcgga cagtgccgtg cgttccgcca gatcggcgag
     1141 cagcaggaga cgctcgagac gatgggaccc ggcgacgtct tcggcgagat ggcgctcttg
     1201 ctcgacgagc cgcgctacgc ttccgtcgag gcgatggagc ccgtgaccct gctcgtcgtc
     1261 gaccgcgcaa ccttgacgga aggactcgga gtcgagggct ggacgggggc gctcgtgcgc
     1321 gcgcttgccg agcgattccg cgccctcgag gcgaccgtgc gaagctccgg cctacgccgg
     1381 ggttgagctt tgccccggat tgagctagcg ctcgatcaat ggcgtcctac gactccgctc
     1441 gcggctgcta cgtcgtgcgc gtcgtttacg acgggccggg catggccggc aagaccacga
     1501 acttgcgaaa gatctgcgag ttcgtgcccg ccacgcgccg cggcgagctc gtgacgcccg
     1561 ccgagctccg cggccgcacg atgttcttcg attggctcga ggtggacggc ccgagccgcg
     1621 cccccgcgcc catcaagttg cagctcgtga gcgtgcccgg acaaatcgag cgcaactacc
     1681 gccgtcgccc gctcgtcgaa gcggcagacg tcgtcgtgtt cgtgtgcgac gcctcgccgg
     1741 cgcagctccc ggacacgatg cgcgctttcg cgcgcttgcg cggcaccatg aagctccgca
     1801 aaaagccgat tcctctcgtc gtccaagtga acaaacaaga cgtcgagggc gccatcggcc
     1861 ccgaccgcat gatcaagaag ctcaagctcg ccgagggtac gagcgtcctg ccggcgagcg
     1921 ccgagcaggg cacgggcgtc aaagagacgc tcgcgctggc gacgcgccac gcgctccagg
     1981 tgctcggacg gcgcgagctc gagccgctcc tcgccgagct cgccaacgcc gacgcgctgt
     2041 tcgatcacgt cctcaccttc gaggacgccc cgcacgacgg ccccgtcgac gccgaagagc
     2101 tctacatcgg cgccgaagaa gtggacgccg aaggcgccgc tgccgccgcg cacctcgccg
     2161 cctcctcgct cgacgcgctc gaagccaagg ctaaacgcgc cgcgaaacgc tcgcgcgagc
     2221 acggcgcgag ctgacgcgag tcaagcccac ggcagcgcgt cgaaggacga gagcgcgagc
     2281 gcccagctcg cgcgcgtggc ggagagcgag gcgttcgctt cgatccagcg ccgcggctcg
     2341 tagctccgcg ttcctagcga cttcaagaag gcatcgacgg cgtggagcaa gctccgggaa
     2401 cgaaaaggcg cgagcgggcc gtagacgaag ctgcgcggaa tgctggcgat gtcgagcggc
     2461 tcgccgtcga gcgcgagacc gacgcgcgtg aagaggcagg gcaggttcat ggccatggct
     2521 tcgttgcaga cgatgctgtt gccctcgtag ctgctcaaat gcatgaaagc gcgcgcacgg
     2581 cgcatacgct cgggcacctc ggcgggagtg cagccaagcg gctcgaagct gtagtcggga
     2641 aacgcctgcg cgagtcgcgg atacacgagc gagcccttgt gccgaaagcg tccgtcgtgg
     2701 agcacgagcc gtgaaccgac gttgtcgagc cggccgtcga agcgctcgag gtcgaccgcg
     2761 tgatagatga cgtgcgcggc ccgattgccg tgcaggcgcg cgaaggtgtc cgagatccag
     2821 cgcgcacagg cgacccacaa cgtatttttg cgcttggcgg ctcgcgcttg acgccgcacg
     2881 agcgccacga gctcgccctg ccgcagcgcg aaatacttct tgagcatgac gccgtgctga
     2941 aagccgatga cggggatgtc cgtcggccaa tcgagcaccc actggttgtc gcaaatcacc
     3001 ggtaagcgcc gctcgcgcac gagcgccaga tcctgggttt tcggcgtcat gaacaagact
     3061 tcacgaaaca cgctgccgag attctgcgca aagctctcga cgccgccgcg cgccgtgcgc
     3121 gggtcgttca gcgcgtagtg cacgacgctg cgctcgatga gctcgaccat gacgcggcca
     3181 tgctaacgtt tcgcccgccc gtatgtctca gacgattcgc gcgctcggta ccgccccctt
     3241 ctcgcggtcg gcgctgcagg aaaagatccc ggaattttta gggctcctcg ccgagcgccc
     3301 gttcgaggac aaccacggcg gcatgcgtgc gccgcacctg ttcgcgacgt gggtcatggt
     3361 ccaggcgctc gagcccacgc acatcgtgga gagcggcgtg ttcaagggac tcggcacctg
     3421 gctgctcgag cgagccgccc cgcacgcgcg tctttactgc atcgatccgg acccccagag
     3481 tcgcctgtac cactcgtcgc gggccgaata cttcacccgc gacttctcgg agctcgactg
     3541 ggatttgccg cgcgacaaga cgttgctgtt tttcgacgac caccaggacg cactcgctcg
     3601 cgtcgttctg gcggagcgct tggggttcgt ccacctcgtc ttcgaggaca attatccgag
     3661 cggccgcggc gactgctatt cgctcaagaa ggcgttcatg ggcgagcccg ctccgcgccg
     3721 gcagaatctc ttggcgcgtg cccgccacgt gttcgaaggt ccgagccccg ccgagcgcga
     3781 gccagcccgc tacctcgaac gcacgctcga aacgtacttc gagtttccac ccgtgcggcg
     3841 cgccatgacg actcgctggg ctgacgcctg gtccgacgag cgctatccga cgcccccggc
     3901 gctcttcgac tcaccgggtg agccgagcga tcccttcgtc gctgaagcgc gggactacac
     3961 gtggatttgc tacgcgcgcc tgcgcgccgc ccgctgaggg aggcgggggc gagggcccac
     4021 gcgtgcggag ctattctgcc tcattggaac aatctgccgc tgcagcggcg cgcgccgtgt
     4081 cgcctcccgc tgaccattgc cgccgcgcgt cgtggcctct attcgactcc aactgctcgc
     4141 cttcgccggt gctttcgagc gcgataaatg ccgctcgata gagcaccgca gctcggaggt
     4201 ggtcgccccg gcgctcggct tccgccgcct ggcgcgcgta gctctctgcc cgctcgtgct
     4261 tgctcagtgc gccgtcggtc gccatgacct cagcgctatc gcaagctcca tacctgacgt
     4321 gttacccggg gaccacgcgc gggagcgggt cttattgcaa tgaatttgta cgatccgtcg
     4381 cctcggccaa atgctcggaa gcgtcagtgt ttgagcttca gccagtcctt cagaaagcgc
     4441 cagtcgccgg gctcgatcgt cttcgtgacg ctgccgagca gcgcgaacac accgagcacc
     4501 gtcgtgatct cgaggccgag taggacgggc gccggcacgt gcagcgcgcg cttcacggcg
     4561 aagcccgcgg cgcccgcgat gcacgcgagc gcgaaaacgc ggaggtagtt tcgtaccgga
     4621 aagacgcggc tcatcggcac ttcggccgcg cgcgagatga aatacacgta cgtgacgacg
     4681 tgcagcagga aggcgagcgc cgcgccgagc gccgggccga tgaagccgag cgtgagcacg
     4741 agcggaatgc cgaagagcgc gttgtacaag agtccgagcg ccgcggctcg cacgacgagg
     4801 cccggcttgc ccgcagcgac gatgacggtg ccgaacgcag ccacgcgcaa gaacgtgagc
     4861 accgaataac agcgaaagat gtcgaccgcc gacgcgtacg ccttcgtgaa catcagcggc
     4921 atgagctcgt cggcgccgat cacgagcgcc atcgtgatcg ggacgacgat gagcgtcacc
     4981 ttgtggatgc cccgttgcca gagctggagc gccgcgtacg gctcgcgcgc ttggaacaga
     5041 cgcacgagct ccggcgtgta ggcggcgccc accgagtacg cgatcgtccc gacaatcggt
     5101 acctgccacg cgccggcttg atagtccgca aagcgcgttc ccggcagcgc gaacaggatc
     5161 agccagcggt cgagctgcgc gttcacttgg ccgagcgctt cggtggctcc gagcggcagc
     5221 gcaaacgcga agagcgccct cacgccgagc gggctcggca cgcgctcgac atggccgtac
     5281 agatacttga attcccagag cagcagcagg ccgaagctcc agcgcaccac ggcgtaaacc
     5341 acgatcaccg tgccgacact ggtcttgagt gcgagcggaa cgagcgtcgc gagcgtgagg
     5401 ccgatcgtgc gcaccacctg caggccagcc gagtggcgcg cgcgcccttc g
//
LOCUS       DATIML010001288         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5185925, whole genome shotgun sequence.
ACCESSION   DATIML010001288 DATIML010000000
VERSION     DATIML010001288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5185925"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1750
                     /locus_tag="VLJ38_22190"
     CDS             <1..1750
                     /locus_tag="VLJ38_22190"
                     /inference="COORDINATES: protein motif:HMM:NF023945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="heat-shock protein Hsp70"
                     /protein_id="HSU42315.1"
                     /translation="LEGFLPLVERTAKPPPRRSGLVAFGLPYETDPAITRHIAEFLSR
                     HVPAGAPLAGVLLNGGLFRAERARSRLVEALSVLTGRAPALLSHTDPDLAVARGAVAY
                     GLSLAGRGLRIAGGTAHAFFLAAEAEGETRAVCVVPRGAREGERHVAASRPLALRVGQ
                     PVRFELYASDTERIFAPGDIVELSDEFEKLSPLVATFESGAASNETELPVVLEGELTP
                     VGTVELSCLEADADRRTRRRFRLAFELKRPNATVARPASLGPTSARPSSLPDATRLAS
                     GLDAIDRVFGKGRKDVDARETKDLWQTLERLFGERTSWSGDLNRALFDALAPKSAARR
                     RSPDHERNFWQLAGFTLRPGFGHPKDPERIAQLSPLFEQGVTHAAEMRGWRAYFVAWR
                     RIAAGLDEALQLRMRALFDAFFAPPELKLKTPKGLRPLAPDELLELLSWLERVPVAER
                     VGLGNWLIERTWTQRDPRLWTAIARLGARIPAYASAHYVVPPSTAERWLDHLLREKWR
                     DVPTAAPAAVLLARRTGDRARDISERVRDEVVRALEAVAAPAEAVHTVREVVAVAEAE
                     RAQWFEDLPAGLRLLA"
     gene            1767..>2242
                     /locus_tag="VLJ38_22195"
     CDS             1767..>2242
                     /locus_tag="VLJ38_22195"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSU42316.1"
                     /translation="MIFRQLFDLTSSTYTYLLADERTRRAVLIDCVFERHARDVALMH
                     ELELDLVCVIDTHCHADHVTGAWRMKTALDCHIALASVYGARNVDLPLSHGDVVPFGD
                     QALEVRATPGHTDGCLSFVTLDRRLVFTGDALLVRGTGRTDFQQGSAHRLFRSIRD"
BASE COUNT          316 a          847 c          717 g          362 t
ORIGIN      
        1 gctcgaggga tttttgcccc tcgtggaacg caccgcgaaa ccgccgccgc ggcgctcggg
       61 gctcgtggcg ttcggcttgc cgtacgagac ggacccggcg atcacgcggc acatcgcaga
      121 atttttgagc cgccacgtgc cggcgggggc gccgctcgcg ggcgtgctgt tgaacggcgg
      181 actctttcgc gccgaacgcg cgcggtcgcg gctcgtcgaa gcgctctcgg tgctcaccgg
      241 ccgtgctccg gcgctgctct cgcacaccga tcccgatctc gccgtggctc gtggtgccgt
      301 cgcgtacggc ttgtccctcg cggggcgcgg cctacgcatc gcgggcggca cggcgcacgc
      361 gttcttcttg gctgccgaag ccgaagggga aacgcgggcc gtgtgcgtcg tgccccgcgg
      421 cgcgcgcgag ggcgagcgtc acgtcgccgc gtcgcgcccg ctcgcgctgc gcgtgggtca
      481 gcccgtgcgc ttcgagctct acgcatcgga taccgagcgg atcttcgcgc ccggagacat
      541 cgtcgagctc agcgacgaat tcgaaaagct ctcgccgctc gtcgccacgt tcgagtccgg
      601 tgccgccagc aacgaaaccg agctccccgt cgtgctcgaa ggcgagctca cccccgtcgg
      661 cacggtcgag ctctcctgtc tcgaagctga cgccgatcgc cgcacccgcc gccgcttccg
      721 tctggctttc gagctcaagc gcccgaacgc caccgtcgcg cgccccgctt ccctgggccc
      781 gacctccgcg cgcccgagct cactacctga cgcgacgcgc ctcgcgagcg gcctcgacgc
      841 catcgatcgc gtgttcggca aaggtcgtaa agacgtcgac gcgcgcgaga ccaaagacct
      901 ctggcagacg ctcgaacgcc tcttcggcga gcgcacgagc tggagcggcg atttgaaccg
      961 cgcgctcttc gacgcactcg cgccgaaatc cgccgcgcgc cgtcgctcgc ccgaccacga
     1021 gcgcaacttc tggcaactcg cgggctttac gctgcgcccc ggcttcggcc accccaaaga
     1081 tcccgagcgc atcgcgcagc tttcgccgct cttcgaacaa ggcgtcacgc acgccgccga
     1141 aatgcgcggc tggcgcgcct acttcgtggc ctggcgccgc atcgccgccg gcctcgacga
     1201 ggcgctgcag ctgcgaatgc gcgcactgtt cgacgcgttc ttcgcgccgc ccgagctcaa
     1261 gctgaagacg cccaagggct tgcgcccgct cgcgcccgac gagctgctcg agctcttgag
     1321 ctggctcgaa cgcgtccccg tcgccgaacg ggtcgggctc ggcaactggc tcatcgagcg
     1381 cacgtggacg cagcgcgatc ctcgcctctg gaccgccatc gctcgcctcg gcgcgcgcat
     1441 tccggcttac gcgagcgctc actacgtcgt tccgccgagt acggccgagc gttggctcga
     1501 ccatctgttg cgcgaaaagt ggcgcgacgt gccgaccgcg gcgccggcgg ccgtgctcct
     1561 cgcgcgccgt acgggcgatc gggcgcgtga catctccgaa cgcgtgcggg acgaggtcgt
     1621 gcgtgcgctc gaagcggtcg cggctccagc ggaagcggtg cacaccgtcc gtgaagtcgt
     1681 cgccgttgcg gaagcagagc gcgcacaatg gttcgaggat ttgccggcgg ggctgcggct
     1741 gctcgcctga gaaagcgacg ggacgcatga tctttcgcca actattcgac ctgacctcga
     1801 gtacgtacac gtacctgctc gccgatgagc gcacgcgccg ggccgttctc atcgactgcg
     1861 tcttcgagcg tcacgcccgc gacgtggcgc tcatgcacga gctcgagctc gacctcgttt
     1921 gcgtcatcga cacgcactgc cacgctgacc acgtcacggg cgcctggcgc atgaagacgg
     1981 cgctcgactg tcacatcgcg ctcgcgtccg tctacggagc tcgcaacgta gacctcccgc
     2041 tctcgcacgg tgacgtcgtc ccgttcggcg accaagcgct cgaagtccga gccacgcccg
     2101 gccacaccga cggctgcctc tccttcgtca cactcgatcg gcggctcgtc ttcaccggcg
     2161 acgctctcct cgtccgcggt actggtcgca cggacttcca gcaaggcagc gcccaccgcc
     2221 tcttccgttc catccgcgac ca
//
LOCUS       DATIML010001289         2338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3159806, whole genome shotgun sequence.
ACCESSION   DATIML010001289 DATIML010000000
VERSION     DATIML010001289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3159806"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..992
                     /locus_tag="VLJ38_22200"
     CDS             <1..992
                     /locus_tag="VLJ38_22200"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU42317.1"
                     /translation="FGGLIGNSPKMQEVYRLALGVATTASTVLILGESGTGKELTARA
                     IHQHSARSEKAFVPVNCSAIPVDLVESELFGHVKGAFTGATTSRPGLFEVADGGTLFL
                     DEVGDLPPLAQVKLLRALQEAEIKRVGSNDTKTVDVRVIAATNVDLKTRIAEGRFRED
                     LYYRLNVVAISLPPLRDRPEDIPLLAQHFVGKYADRANRPVRTISPAAMELLKGALWK
                     GNVRELENAIEHAVVFCVGESIEPKDLPDTEQPKRDAPTPPGNGGSVAPLGDVPFPVA
                     KARALAAFEAAYFQSVLDRAGGNVSEAARLSGLDRSNFRRAARRAGVKMRDDG"
     gene            1112..2338
                     /locus_tag="VLJ38_22205"
     CDS             1112..2338
                     /locus_tag="VLJ38_22205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSU42318.1"
                     /translation="MQVDTLEQSLVIPPEVRRGVRRRRWTTLAVVGVLAGAATVYAFA
                     RSRPVPTQYRTTAVERRTIVRVVEATGHLDVKTRVDVSAPEEGRLVELLVKSGDAVKA
                     NQPLARLDPRASSIALRGAQASVAAAGSRVGEAEAALAAATESRTRTERLLQKELASP
                     AELEAARGAEAKARAALATARAERSATSASLKSAELSQTLATLVSPIDGVVLQAPTTL
                     GPALGPDHRSLFVVGSALDTLRIDADVAESEVGELKPGQLAHFAVPAYPGRNFEARVE
                     RIGNDAQRTSAAVRYPVELSARNPERTLLPGMTATVTMEVSRVENALAVREAALRFRP
                     EGTPDAPPRRQVWLVTSHGLESVAVTPGLSDGAFTAIEPEPPAQLPVGTRVALGVLGG
                     SDAQKTQGPGIKLGGR"
BASE COUNT          359 a          813 c          828 g          338 t
ORIGIN      
        1 agttcggcgg gctcatcggc aattcgccga agatgcagga ggtgtatcgg ctcgccctcg
       61 gcgtcgcgac gaccgcttcg acggtgctca ttctcggcga aagcggcacg ggcaaggagc
      121 tcacggcgcg cgcgatccac cagcattcgg cgcgctcgga aaaggcgttc gttccggtca
      181 attgctcggc gatcccggtg gacctcgtcg agagcgagct cttcggtcac gtgaagggcg
      241 cgttcacggg cgcgacgacc tcgcggccgg ggctcttcga agtggcggac ggcggcacgc
      301 tctttctcga cgaggtcggc gatctgccgc cgctcgcgca ggtgaagctc ctgcgcgcct
      361 tgcaagaagc ggagatcaag cgcgtcggtt cgaacgacac gaagaccgtc gacgtgcgcg
      421 tgatcgccgc gaccaacgtc gatttgaaga cgcgcatcgc cgaaggtcgc ttccgcgagg
      481 acctctacta tcggctcaac gtcgtcgcca tttcgctgcc gccgctgcgt gacaggcccg
      541 aggacatccc cctgctcgcg cagcacttcg tcggcaaata cgccgaccgc gcgaatcgcc
      601 ccgtgcgtac gattagcccc gccgccatgg agctgctcaa gggcgcgctc tggaagggca
      661 acgtgcgcga gctcgagaac gcgatcgagc acgccgtcgt cttctgcgtg ggcgaaagca
      721 tcgagcccaa ggatttaccg gacaccgagc agccgaagcg ggatgctccg acgccgcccg
      781 ggaacggcgg ctcggtggcg ccgctcggcg acgtgccgtt tcccgtcgcc aaggcgcgcg
      841 cgctcgccgc cttcgaagcc gcctactttc agagcgtgct cgaccgcgcg ggcggtaacg
      901 tgtccgaggc tgcgcgcctt tccggtctcg atcgctcgaa cttccggcgt gcggcccggc
      961 gcgccggcgt aaaaatgcgc gacgacggct gatttccggc ggcgcttggc ccgaatggca
     1021 cagctgaggc acggcattca caccgaaatt tgccctggcg ggacgcctcg gagttgttca
     1081 tggtgagccc cgagcagcta agctcgcccg cgtgcaggtc gacactttgg agcaatcgct
     1141 cgtgattccg ccggaggttc ggcgcggcgt tcggcgccgg cgctggacga cgctcgccgt
     1201 cgtgggcgtg ctcgccggcg cggcgacggt gtacgccttc gctcgcagcc gcccggtgcc
     1261 gacccagtac cgcacgaccg ccgtcgagcg gcggacgatc gtgcgcgtgg tcgaggcgac
     1321 ggggcacctc gacgtgaaga cgcgggtcga cgtgagcgcg ccggaggaag ggcggctcgt
     1381 cgagctgctc gtgaaatcgg gtgacgccgt gaaagcgaat caaccgctcg ctcggctcga
     1441 tccgcgtgcg tcgtcgatcg cgctgcgcgg cgcgcaggcg agcgtcgcag cggctggaag
     1501 tcgcgtggga gaggccgaag ccgcgctcgc cgccgcgacc gaatcgcgca cccgcaccga
     1561 gcggctcctg caaaaagagc tcgcgagccc cgcggagctc gaagccgcac gtggcgcgga
     1621 agccaaggca cgcgcggcgc tcgcgacggc gcgcgccgaa cgttcggcga cgtccgcgag
     1681 cctcaaatcg gccgagctgt cgcagacgct cgccacgctg gtctcgccca tcgacggcgt
     1741 cgtgctgcag gcgccgacca cgctcggtcc ggcgctcgga ccggaccatc gttcgctctt
     1801 cgtcgtcggt tccgcgctcg acacgctgcg catcgacgcc gacgtcgccg agtctgaagt
     1861 cggcgagctc aaaccggggc aactcgcgca tttcgccgtg ccggcgtacc ccggccggaa
     1921 cttcgaggcg cgcgtcgaac gcatcggcaa cgacgcgcag cggacgagcg cggccgtgcg
     1981 ttaccccgtc gagctcagcg cgcgaaatcc cgagcggacg ctgctgccgg gcatgaccgc
     2041 gaccgtgacg atggaggtga gccgcgtcga aaacgcgctc gccgtgcgcg aggccgcgct
     2101 ccggtttcgg cccgaaggga cgcccgacgc gccgccgcgc cgccaggtgt ggctcgtcac
     2161 gtcacacggg ctcgagtccg ttgccgtcac gcccgggctc tcggacggcg cgttcaccgc
     2221 catcgagccg gagccgccgg cgcagttgcc cgtcgggacg cgcgtggcgc tcggcgtact
     2281 gggcggcagc gacgcgcaga agacgcaagg gcccgggatt aaactcgggg gtaggtag
//
LOCUS       DATIML010001290         5956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1430122, whole genome shotgun sequence.
ACCESSION   DATIML010001290 DATIML010000000
VERSION     DATIML010001290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5956
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430122"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2293)
                     /locus_tag="VLJ38_22210"
     CDS             complement(<1..2293)
                     /locus_tag="VLJ38_22210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4175 domain-containing protein"
                     /protein_id="HSU42319.1"
                     /translation="MPAARMDPAAALEGHASAWRTRVKPALRVAFWGALFAAVVAAGA
                     LGRRGTLEARLAALGIVLAVLAVFVARSVIERRSLERRDRLVRRLILSEDRLLGEKVL
                     RALALQERAEVDPSVGSSELASVHLERTVARIPAELVAGRGERVARRFRTAALGLALA
                     GAVGVGVDPPRTVEGLDVLAARRGVAPLDMVWLEGMTLVVQPPPYLRIPEHHLDPQGA
                     AAPQGSLLVVRGTPVRSGRRLVLSDGTREVPFVTDGSDGLVARFPLERDVTLRVAARF
                     GDVLVREPLPMPVQAVPDAVPLVMLEGAPKQVELEKIDRLDLSYLAADDHGLREIDLV
                     LHSGGREERRVLEKLDGQSRVEQGAQGLDVNDPFLRRVFLPVAVTIEARDNDVLEGGR
                     WGASAAITIVPPAVGALEAERFKLLAEARGAVVDFLAWLVEPPAGAEPKAIEQEVAPR
                     RTAAAKALRSATERRPGGQPVPSGLASFLRGQARRLEDAQPKGGAVNARVEEVVLAVD
                     GALRALAMRDAQTVAKRLGDAAEEAADGYAEAQNPEKTRHGTERATVALGVLDIGAEH
                     LLSLEGLGGDLGSVTRGELRRIRRAVGEKSYLHAELAARHLAARLRRPSPSFTAAGGG
                     VEGGRHGASREPNESPSQADKRFDELAQELGDLTREHAALLDQVEHELEDAGNAAKTD
                     DLRREAAEHAEALREAVRDLPRSGAREGSGRAAAGLARDHAQAMAERLERLDLSAAAE
                     SGRTARGLVDEAQKKTLAPETSSD"
     gene            2485..3282
                     /locus_tag="VLJ38_22215"
     CDS             2485..3282
                     /locus_tag="VLJ38_22215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42320.1"
                     /translation="MRRFARVDPSAERVCRVVLGLPEVGLRLDWLRDYLSHGPAREQA
                     EELERVCEASERSDPHARETVLALALLFARSTDDAFVVRLRAYAESLHLLSLGRLLRR
                     APTSGRSVPPPGAAPVPDYGRGRELTVGERKSLARAPSRRAFDKLLSDPHPLVIRQLL
                     ENPRLTEDDVVRIAARRPARPEAVLAIARSERWLKRPRVRLAILLNPGSPPSVAMPLL
                     AACTRSELVEIVHGGDTSKVLRATARELLARRPPLEQSDAADHVVLH"
     gene            3572..3877
                     /locus_tag="VLJ38_22220"
     CDS             3572..3877
                     /locus_tag="VLJ38_22220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42321.1"
                     /translation="MRVGDLFSVAVQGLEHQLDAMDGAAEQVLVAGTAPSTPDRVDIS
                     AGAKSAASGGDSLTSGLEGALVDLRVSKYLAVANLKVLETGAEMAQDVTDIVRPHGG"
     gene            complement(3881..4141)
                     /locus_tag="VLJ38_22225"
     CDS             complement(3881..4141)
                     /locus_tag="VLJ38_22225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42322.1"
                     /translation="MSARAVSGVIEQEEAASTSAAGAAARSYECDACGDSFEGEPAGA
                     GLFLWTRGEEIRYEEPPLCEQCASRITVGALLKWDTEDEEEG"
     gene            complement(4149..5402)
                     /gene="fabF"
                     /locus_tag="VLJ38_22230"
     CDS             complement(4149..5402)
                     /gene="fabF"
                     /locus_tag="VLJ38_22230"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: protein motif:HMM:TIGR03150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HSU42323.1"
                     /translation="MTKRAVITGIGMMTPLAVGREKSWSELVRGKSGIRPFTQFGPSR
                     LKTQFGGEVPDFDPTLWLDKPTVRRTDRYTQLAIAAADEAMADAGLEIDAAEAPRVGV
                     LIGVALGGLASLEHHHSLLLDKGPDRMNPFMVPMMLANTAPGMLAIRYGARGPNFTLT
                     SACASGAHAIGESLELIRRGVSDVVVTGGVESVLTELCVSGFCAMRALSTRNDDPAGA
                     SRPFALGRDGFVISEGAGIVVLEELEHARARGARIYAEVAGYGASADAHHITAPHPEG
                     EGVVVAIERALASAGVAASDIEHVNAHATSTPAGDEGEARALRRVFGERTGDVLVTAP
                     KSMIGHTLGAAGGIETAIVALTLHHSLIPPSINCEEQDPACDLNVVKGSAREGKVELA
                     LKNSFGFGGTNASLVLRRFDGRRGV"
     gene            complement(5399..>5956)
                     /locus_tag="VLJ38_22235"
     CDS             complement(5399..>5956)
                     /locus_tag="VLJ38_22235"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HSU42324.1"
                     /translation="RRRGIAATGVDSVMGAAGLTAGAFYLHFRSKDALIAAAVAKAGE
                     RAHERWLAPLAGVAGRAWGRAFLARYLSEDHRDDLESGCSVPSLAAEVARSGAPARRH
                     FEQRLRGFFELVQGHTRPADAAGRERAIAAIALAVGGVLLSRVVLDRTLSREILMACR
                     ASAERLLELDGDPSPRKRTLPKELA"
BASE COUNT          858 a         2269 c         1981 g          848 t
ORIGIN      
        1 gatccgacga cgtttcgggc gcgagcgtct tcttctgcgc ttcgtcgacc aacccgcgcg
       61 ccgtgcgtcc gctttcggcc gctgcgctca gatcgagccg ttcgagccgt tcggccatgg
      121 cctgcgcgtg gtcgcgcgcg agccccgccg cggcacgccc cgacccttcg cgcgcgccgc
      181 tgcgcggcaa gtcgcgcacc gcttcgcgca gcgcctcggc gtgttcggcg gcctcgcgcc
      241 gcaaatcatc ggtcttcgcg gcattgccgg cgtcctcgag ctcgtgctcg acctggtcga
      301 gcagcgcggc gtgctcgcgc gtgagatcgc cgagctcctg cgcgagctcg tcgaagcgct
      361 tgtccgcttg cgacggcgac tcgttcggct cgcgcgacgc gccgtgccgc ccgccctcca
      421 cgccgccccc cgcggccgtg aacgacgggc tcggccgccg cagccgagcg gccaggtgac
      481 gcgccgcgag ctcggcgtgc aggtaactct tctcgccgac ggcgcgacgg atgcgccgga
      541 gctcgccgcg cgtcaccgag cccaagtccc ccccgagccc ctcgagcgag agcaaatgct
      601 ccgcgccgat atcgagcacg ccgagcgcga cggtcgcccg ctcggtcccg tgcctggtct
      661 tctcggggtt ttgcgcctcg gcatagccgt cagccgcttc ctcggccgcg tcaccgagtc
      721 gcttggcgac ggtttgggcg tcgcgcatcg cgagcgcgcg cagagcgccg tccaccgcga
      781 gcacgacctc ttccacccgc gcattcacgg cgccgccctt cggctgcgca tcctcgagcc
      841 gccgcgcctg cccccgcaaa aacgaagcga ggccggacgg caccggctgc cctcctggac
      901 gccgctccgt cgcgctgcgc agcgccttgg cggccgccgt ccgacgcggt gccacctcct
      961 gctcgattgc cttcggctcg gcaccggcgg ggggctcgac gagccaggcg agaaaatcga
     1021 cgaccgctcc gcgcgcctcg gcgagcagct tgaagcgttc ggcctcgagc gcgccgacgg
     1081 cgggcggcac gatcgtgatc gccgcgctcg cgccccaacg cccgccttcg agcacgtcgt
     1141 tgtcgcgcgc ctcgatcgtc acggcgaccg gcaaaaacac ccggcgcaaa aacggatcgt
     1201 tcacgtccag gccctgcgcg ccctgctcga cccgcgattg cccgtcgagc ttctcgagca
     1261 cgcgccgctc ttcccgcccg cccgaatgca acacgagatc gatctcgcgc aagccgtggt
     1321 cgtcggcggc aaggtagctc aaatccagcc gatcgatctt ttcgagctcc acctgtttcg
     1381 gcgcgccctc gagcataacg agcggcacgg cgtcgggcac cgcctgcacg ggcatcggca
     1441 gcggctcacg gacgagcacg tcgccgaaac gcgccgcgac ccggagcgtc acgtcgcgct
     1501 cgagcggaaa gcgcgccacg agcccgtcgg agccgtccgt cacgaacggc acctcgcgcg
     1561 tgccgtcgct caagacgagc cgtcgccccg agcgcacggg cgtgccgcgc accacgagca
     1621 aactcccttg cggcgccgcc gcaccttgcg ggtcgaggtg gtgctcgggg atacgcaggt
     1681 acggcggcgg ctgcaccacg agcgtcatgc cctcgagcca caccatgtcg agcggcgcga
     1741 ccccgcggcg cgccgcgagc acgtcgagcc cctcgaccgt ccgcggcgga tcgaccccca
     1801 cgccgacggc gcccgccagg gcgaggccga gcgccgcggt ccggaagcgc cgcgccaccc
     1861 gttcgccgcg cccggcgacg agctcggccg gaatgcgcgc caccgtccgc tcgaggtgaa
     1921 cggaggcaag ctcactcgag ccgacgctcg gatcgacctc ggctcgctcc tgcagcgcga
     1981 gcgcccgcag gaccttctcc ccgagcagcc ggtcctcgct caggatcagg cgccgaacga
     2041 gccgatcgcg ccgttcgagg ctccgccgct cgatgaccga gcgcgcgacg aacacggcca
     2101 aaaccgcgag cacgatgccg agcgcagcga gccgggcctc gagcgtcccg cgccgcccga
     2161 gcgcccccgc cgcgaccacc gccgcgaaca gagcccccca aaacgccacc ctgagcgccg
     2221 gcttcacgcg cgtgcgccaa gcgctcgcat gtccctcgag agcggccgcg ggatccatcc
     2281 gtgcggctgg cataccgcgc gccgctcgcc atcgcacgcg tcctcgcgtt gaagcgagca
     2341 acggccgtat tttttttgga gcacggcgcc tgcacccgcg gccctccgcg tccacttgcc
     2401 gatactgacc caccccgaag cgcggggccg tgcgcggggc cgtgctcggg accgtgcaac
     2461 gcgggttgcg acggagccga aggaatgcga cgcttcgcga gagtggatcc gagcgccgag
     2521 cgcgtctgtc gtgtggtcct cggcttaccc gaggtcggct tgcggctcga ctggctacgc
     2581 gactacctct cgcatggccc tgcgcgcgaa caggccgagg agctcgaacg cgtgtgcgag
     2641 gcgagcgaac gctccgatcc gcacgctcgc gaaaccgtgc tcgccctcgc gctgctcttc
     2701 gcgcgctcca ccgacgatgc cttcgtcgtg cgcctgcgcg cctacgcgga gtcgctccac
     2761 ctcttgagtc tcggtcgctt gctccggcgc gccccgacgt ccggccgctc cgtgccgccg
     2821 cccggcgcgg cgcccgtccc cgactacggt cgcggccgcg agctcaccgt cggcgaacgc
     2881 aaaagcctcg cgcgcgctcc gtcgcgccgc gccttcgaca agttactctc ggatccgcac
     2941 ccgctcgtca ttcgccagct gctcgaaaat ccgcgcctga ccgaggacga cgtggtgcgc
     3001 atcgccgcgc gccgtccggc gcggcccgaa gccgtgctgg cgatcgcgcg ttcggagcgc
     3061 tggctcaagc gcccccgcgt gcgcctcgcc attttgctga acccgggctc gccgccgagc
     3121 gtcgcgatgc cgctgctcgc cgcctgcacg cgcagtgagc tcgtcgaaat cgtgcacggc
     3181 ggggacacga gcaaagtgct gcgcgcgacg gcgcgcgagc tgctcgcgcg ccgcccgccg
     3241 ctcgagcaat ccgacgccgc cgatcacgtc gtgttgcact gaggcttagc ctcgagtttg
     3301 gtggtcttgg aaccctcccg agaacttttt cgttggcgcc ggccgctgac gacgttgcgg
     3361 aaagtccagc gtctctcgca tccaggagcg gcccagcacc ggcctcgccg gttttctcgt
     3421 agcacttggc cgctcacgtc gatcgagatc tggtcttgca agaccgcgca actcgagtcc
     3481 agcgtcccga aacgagacgc agcgctcgac caggaccgct cgagaactcc ccgctcaagc
     3541 tgcgcccgag cgagccgttc gacgtcttcg aatgcgagtc ggcgatctct tctccgtcgc
     3601 ggtgcaaggc ctggagcatc agctcgacgc gatggacggc gcggccgagc aagtgctcgt
     3661 cgcgggcacg gcgccgagca ccccggaccg cgtcgacatt tcggcgggcg cgaaaagcgc
     3721 agcgagcggc ggcgactcgc tcacttccgg cctcgaaggc gcgctcgtcg acctgcgcgt
     3781 ctcgaagtac ctcgccgtcg ccaacctgaa agtgctcgaa accggcgccg agatggcaca
     3841 ggacgtcacg gacatcgtgc ggccgcacgg cggctgaagg tcagccctct tcttcgtctt
     3901 ccgtatccca cttgagcagc gcgccaaccg tgatgcggga ggcgcattgc tcgcagagcg
     3961 gcggctcttc gtaacgaatc tcctcgccac gcgtccagag gaacaagccg gctcccgccg
     4021 gctcaccctc gaaggaatcg ccgcaggcgt cgcattcgta cgaccgggcg gccgcgcccg
     4081 cggcggaggt cgaggcagct tcttcctgct cgatgactcc ggacacggcc cgcgcgctca
     4141 tgtcgccatt atacaccgcg acggccgtcg aaccgcctga gcacgagcga ggcgttcgtc
     4201 cctccgaaac cgaaggaatt cttgagagct agctcgactt tgccttcccg cgccgacccc
     4261 ttgacgacgt tcaggtcgca cgccgggtcc tgctcctcgc agttgatgct gggcggaatc
     4321 aagctgtgat gcagcgtcag ggcgacaatc gccgtctcga tgccgccggc ggcgcccagc
     4381 gtgtggccga tcatggattt gggagccgtc acgagcacgt cgcccgtgcg ctcgccgaac
     4441 acgcgccgga gcgcgcgcgc ttcgccttca tcacccgccg gggtggaagt ggcgtgagcg
     4501 ttgacgtgct cgatgtcgct cgccgcgacg cccgccgacg cgagcgcgcg ctcgatggcg
     4561 acgacgacgc cctcgccctc ggggtgcggc gccgtgatgt ggtgcgcgtc ggcgctcgcg
     4621 ccgtaccccg cgacttcggc gtaaatgcgc gcgccgcgcg cgcgggcatg ctcgagctcc
     4681 tcgagcacga cgatgccggc cccctccgag atcacgaagc cgtcgcgccc gagcgcgaac
     4741 gggcggctcg cacccgccgg gtcgtcgttg cgcgtcgaga gcgcgcgcat cgcgcaaaag
     4801 cccgagacgc agagctcggt cagcacggac tcgacgccgc ccgtgacgac cacgtccgag
     4861 acgccgcggc gaatgagctc gaggctctcg ccgatggcgt gcgcgcccga cgcgcacgcc
     4921 gaggtgagcg tgaagttcgg cccgcgcgcg ccgtagcgga tcgcgagcat gcccggcgcc
     4981 gtgttcgcga gcatcatcgg caccatgaac ggattcatgc ggtccggccc tttgtcgagc
     5041 aggagcgagt gatggtgctc gagactcgcg agcccgccga gcgcgacgcc gatgagcacg
     5101 ccgacgcgcg gcgcctcggc cgcgtcgatc tcgagcccgg cgtccgccat cgcttcgtcc
     5161 gcggccgcga tcgcgagctg cgtgtagcgg tcggtgcggc gcacggtcgg tttgtcgagc
     5221 cagagcgtgg gatcgaagtc gggcacttcc ccgccgaact gcgtcttgag ccgcgaaggc
     5281 ccgaactgcg tgaagggacg gatgccgctc ttgccccgca cgagctccga ccagctcttt
     5341 tcccgtccca cggcgagcgg ggtcatcatt ccgatgccgg tgatcacggc gcgtttggtc
     5401 atgctaattc cttcgggaga gtgcgcttgc gcggggatgg gtcgccgtcg agctcgagca
     5461 gtcgttcggc gctcgcgcga caagccatga ggatctcgcg cgagagcgtg cgatcgagca
     5521 cgacgcgcga caacaagacg ccgccgaccg cgagcgcgat cgcggcgatc gcccgctcgc
     5581 gcccggcggc gtcggcgggc cgcgtgtgcc cttgaacgag ctcgaaaaag ccacgtagcc
     5641 gctgctcgaa gtgccgtcgc gccggcgctc cggagcgcgc cacctcggct gcgaggctcg
     5701 gcaccgaaca gccgctctcg aggtcgtcgc gatggtcttc gctcaaataa cgggccagaa
     5761 acgcacgccc ccaggcccgc ccggcgacgc ccgcgagcgg cgcgagccat cgctcgtgcg
     5821 cccgctcgcc cgccttggcg accgcggcgg caatcaaggc atctttggaa cgaaaatgaa
     5881 ggtagaaagc gccggccgtt aggcccgccg cgcccatgac cgaatcgaca ccggtcgcgg
     5941 caatcccacg gcgccg
//
LOCUS       DATIML010001291         4352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3160409, whole genome shotgun sequence.
ACCESSION   DATIML010001291 DATIML010000000
VERSION     DATIML010001291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3160409"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..460)
                     /locus_tag="VLJ38_22240"
     CDS             complement(<1..460)
                     /locus_tag="VLJ38_22240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42325.1"
                     /translation="MLWGCGQTAPKQSLGSESDALVVPTQVNSFAVLATGHATFGDRS
                     AFSGGDVGVAPGTGDSVTAGFDTQIAVGNYTLAQRMVLKDRAHAGNLAATTVVPGAGA
                     TYAALVAYAPPPAAPPIVAFTAGTTPLQVNAPTTLAPGNFGLVTVNSTLTL"
     gene            722..3079
                     /locus_tag="VLJ38_22245"
     CDS             722..3079
                     /locus_tag="VLJ38_22245"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSU42326.1"
                     /translation="MLRRYVNLVVAWPKLVIALVCAVTVGLTLFIPRLKVNIDVDSQI
                     PPGDPRVIVGKRIEKLFGGKYMTVIGFYPENGTVYTPDILAKVKRVTETVEKIPGVKS
                     GSVISLMSKRVKDINSTEDSLEVKQLADKVPTNDAEMADFKKRVERNRVITSLLVSDD
                     GRATAVLVDFDDFVKAGGPQGLYPKLEKILAPERAPGLEILSAGAPSVLFWLNTYTRR
                     VAILFLVALAMIGYLHYRAFRTLQGMIVPLVTAIMGVLWALGLMGLIQAPMDPWNIMT
                     PILLLAIGAGHSVQILKRYYEEYARSREANPGLSGIEHNRIAVIEATVKVGAVMLAAG
                     AIAALSFGSLAAFGLPSIRSFGLCTAFGIAAALTVEMTFIPAMRVLMSPPTEHQTQRE
                     QHKEIFDTLLERVAEMVRQKREQPILWAFIALIVVAGIGLARLEVGNSLGAQFFEANG
                     PVHGFRMADSRLAGTRVIQVLLEGSAPDAIKDPKVLAQMDALSTFITHQSLPIGKVVS
                     VVDVLKQIGKAIDAEHPEHALPDTPDAVAQFLLLYSMSGDEDDLSRVVDREFKNAVIT
                     AYVKTDDFPSMKTFTVALQKEAARLFQGLPVKASVGGGVTNAIALNETIVEKKTVNLV
                     QISVLVMVITSVLLRSIIGGLLVLLPLATAALCNLGLMGLTGIPLSMGTAAISAMAVG
                     IGADYAVYFLFRVNEEFQRRGDLRDATAAALLTSGKAIAYVASAVAGGYLCLTFSFFK
                     VHVLLGVLVALTMVTSSTATVAFLPAVILRVKPKFLTRGRLKTVA"
     gene            complement(3086..4051)
                     /locus_tag="VLJ38_22250"
     CDS             complement(3086..4051)
                     /locus_tag="VLJ38_22250"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HSU42327.1"
                     /translation="MSARRVDGSSVFQAPPSGTLVLIGNFDGVHLGHRAVLEMSSAEA
                     RARGLATVALTFDPHPSVVLGRGAEPVLTTLERKIELLGQSCPELTVVVEPFTSELAA
                     LEPSEFAERVLAKALGARVVVVGRNFRFGRGRTGDLATLEALGQTLGFEARAEALRGD
                     AEGPYSSSRVREALARGDLANVERVLGRPHSLSGTVVRGAGRGRTIGVPTANLDGVNE
                     ALPPYGVYACLVDRLDGGTRALAKGVVNVGERPTLGAGFSVEAHLFDFDADLYGARLR
                     LHLCTRLREERRFAGIDALRAQIERDLVTAREAVRERVPTSDGWY"
BASE COUNT          733 a         1499 c         1409 g          711 t
ORIGIN      
        1 tcagggtgag cgtcgagttc accgtgacca ggccgaaatt acccggcgcg agcgtcgtcg
       61 gcgcgttgac ctgcagcggc gtcgtccccg ccgtgaacgc gacgatcggc ggcgcggctg
      121 gcggcggcgc gtaagcaacc agcgcggcgt aggtcgcccc ggcgcccggc acgaccgtcg
      181 tggccgccag gttgccggcg tgtgcccggt ccttgaggac catgcgctgc gcgagcgtgt
      241 agttacccac cgcaatctgc gtgtcgaacc ccgccgtgac ggaatctccc gttccagggg
      301 cgaccccgac atcgccaccc gagaaggcac ttcggtcgcc gaaggtcgcg tggcccgtcg
      361 cgagtaccgc gaagctattc acctgcgtcg gcacgaccag cgcgtcgctc tcgctaccga
      421 ggctctgctt gggcgcggtc tgtccgcagc cccacaacat acaagccccc agtaaacccc
      481 aatgacatct cgtcgaattc atgaatcaca cctccggctc gagcctgctc ggcttcgagt
      541 cctcggcggc agcgaataga cgctcgtcga gtgatagtca aactattcag tcgcaacggc
      601 tcgagcaacg gaagcccgac cgcgaggctt ggcgataaag aattttgcaa cgatgactcg
      661 agcctcgctt gccgcgcgcc ccgcatcgtg cgactcaccg cgcctcgctc gacgaaccac
      721 catgctccga cgctacgtca acttggtcgt cgcgtggccc aagctcgtga tcgcgctcgt
      781 ctgcgccgtc acggttggtc tcacgctctt cattccgcgt ctgaaggtca acatcgacgt
      841 cgattctcag atcccgcccg gtgatccgcg cgtgatcgtg ggcaagcgca tcgagaagct
      901 cttcggcggc aaatacatga ccgtcatcgg gttttatccc gagaacggca ccgtctacac
      961 gcccgacatc ctcgcgaagg tcaagcgcgt cacggaaacg gtcgagaaga tccccggcgt
     1021 caagtccggc agcgtcatct cgctcatgtc caagcgcgtg aaggacatca acagcaccga
     1081 agactcgctc gaggtgaagc agctcgccga caaggtgccg acgaacgacg ccgagatggc
     1141 ggacttcaag aagcgcgtcg agcgcaaccg cgtgatcacg agcttgctcg tgagcgatga
     1201 cggccgagcc acggccgtgc tcgtggattt cgacgacttc gtcaaagcgg gcggaccgca
     1261 gggcctgtac ccgaagctcg agaagatcct cgcacccgag cgcgcgccgg gactcgaaat
     1321 cttgagcgcc ggcgcgccgt cggtgctctt ttggctcaac acgtacacgc gacgggtcgc
     1381 gattctgttc ctcgtggcgc tcgcgatgat cggttacctg cactaccgcg cgtttcgcac
     1441 gctgcagggc atgatcgtgc cgctcgtcac cgcgatcatg ggcgtgctct gggcgctcgg
     1501 cttgatgggc ctcatccagg cgccgatgga cccctggaac atcatgacgc cgatcctctt
     1561 gctcgcgatc ggcgcgggac actcggtcca gatcctcaag cgctattacg aggagtacgc
     1621 gcgcagccgc gaggccaatc cgggactctc gggtatcgag cacaaccgca tcgccgtcat
     1681 cgaagcgacg gtcaaggtcg gcgccgtgat gctcgcggcc ggtgcgatcg cggcgctgag
     1741 cttcggctcg ctcgcggcct tcgggttgcc gtcgatccgg agcttcggct tgtgcacggc
     1801 gttcggcatc gccgccgcgc tcaccgtcga gatgacgttc atccccgcga tgcgcgtcct
     1861 gatgtcgccg cccaccgaac atcagaccca gcgcgaacag cacaaagaga tcttcgacac
     1921 gctgctcgag cgcgtcgccg aaatggtgcg ccagaaacgc gagcagccga tcctctgggc
     1981 cttcatcgcg ctcatcgtcg tcgccgggat tgggctcgcc aggctcgagg tcggcaacag
     2041 cctcggcgcg cagttcttcg aggcgaacgg ccccgtgcac ggcttccgca tggccgactc
     2101 gcgcctcgcc ggcacgcgcg tgatccaggt gctgctcgaa ggcagcgccc ccgacgcgat
     2161 caaagatccg aaggtgctcg cgcagatgga cgcgctctcg accttcatca cgcaccagtc
     2221 gctgccgatc ggcaaggtcg tgtccgtcgt cgacgtgctc aagcagatcg gcaaagccat
     2281 cgacgccgag caccccgaac acgccctgcc cgacacaccc gacgcggtcg cgcagttcct
     2341 cttgctctac tcgatgtccg gcgacgagga cgatttgagc cgcgtcgtcg atcgcgaatt
     2401 caagaacgcg gtcatcaccg cctacgtgaa gaccgacgat tttccgagca tgaagacgtt
     2461 caccgtcgcg ctccaaaagg aagcggcgcg cctgttccaa gggctccccg tcaaggcatc
     2521 ggtcggcggc ggcgtcacca acgccatcgc gctcaacgag accatcgtcg agaagaaaac
     2581 ggtgaacctg gttcagatct ccgtgctcgt gatggtgatc acgagcgtgc tcttgcgttc
     2641 gatcatcggc ggcttgctcg tgctcttgcc gctcgcaacg gccgcgctct gtaacctcgg
     2701 tctcatgggc ctcacgggca ttccgctgtc gatgggcacg gccgcgattt cggcgatggc
     2761 cgtcggcatc ggcgccgatt acgcggtcta cttcctcttc cgcgtgaacg aggagttcca
     2821 gcggcggggc gacctgcgcg atgcgacggc tgcggcgcta ctcacctcgg gcaaggcgat
     2881 cgcgtacgtc gcgagtgccg tcgcgggcgg ctatctctgc ctcacgttct cgttcttcaa
     2941 ggttcacgtg ctgctcggcg tcttggtcgc gctcacgatg gtcacgagca gcacggcgac
     3001 cgtcgcgttc ctgccggccg tgatcttgcg cgtgaagccc aagttcctga cgcgcggacg
     3061 gctcaagacg gtggcgtaac gtccgtcagt accagccgtc gctcgtcggg acgcgctcgc
     3121 ggacggcctc gcgcgccgtg acgagatcgc gctcgatctg agcgcgcagg gcgtcgatac
     3181 cggcgaagcg ccgctcctcc cgcaagcgcg tgcacaggtg cagcctgaga cgagcgccgt
     3241 agagatcggc gtcgaaatcg aagaggtggg cttcgacgct gaagcctgcg ccgagcgtcg
     3301 gacgctcccc gacgttgacg acccctttgg cgagcgcgcg cgtgccgccg tcgaggcgat
     3361 cgacgaggca cgcgtagacg ccgtacggcg gcagcgcttc gttcacgccg tccaagttgg
     3421 cggtgggcac gccgatcgtg cgaccgcgac cggcgccgcg cacgaccgta cccgagagcg
     3481 agtgcgggcg gccgaggacg cgctcgacgt tcgcgagatc accgcgcgcg agcgcttcgc
     3541 gcacgcggct gctcgagtag ggaccctccg cgtcaccgcg cagggcctcc gcgcgtgctt
     3601 cgaagccgag cgtctgcccg agcgcctcga gcgtcgcgag atcgcccgtg cgaccgcgac
     3661 cgaagcgaaa gttcctgccg acgacgacga cgcgcgcgcc gagcgccttc gccagcacgc
     3721 gctcggcgaa ctcactgggc tcgagcgcgg caagctcgct cgtgaacggc tcgaccacga
     3781 ccgtgagctc gggacagctc tgcccgagta gctcgatttt gcgctcgagc gtcgtgagca
     3841 cgggttcagc gccgcggccg agcaccacgg acggatgcgg gtcgaacgtg agcgccaccg
     3901 tggccaaacc gcgcgcccga gcttcggcgc tgctcatctc gagcacggcg cggtgcccga
     3961 gatggacgcc gtcgaagttg ccgatcagga cgagcgtgcc gctcggcgga gcctgaaaca
     4021 cggacgagcc atcgacacgg cgggcggaca cggcggcgtt ttagcactac cccggagcga
     4081 tcccggagca ttgcgagagt cttggctggc caggatgccc gagcctgttt cgtgcggccc
     4141 gaaatgcgtt gccagcgcgc gaattgctcg ctacctcgtg aggcgcggca tgaccccgga
     4201 gcaagccatg gcggaggcgc gcgccggtga actccggccc gtctacctga tcgcgggcga
     4261 cgagccgtac ctcgaacgcc tggtcttggc cgagctcaag cgcgcggcgc tcgccggcgg
     4321 ggtgccgggc ctgaacgacg agtacctgac gg
//
LOCUS       DATIML010001292         2451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_853133, whole genome shotgun sequence.
ACCESSION   DATIML010001292 DATIML010000000
VERSION     DATIML010001292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853133"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..741)
                     /locus_tag="VLJ38_22255"
     CDS             complement(<1..741)
                     /locus_tag="VLJ38_22255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42328.1"
                     /translation="MRKLPVVALLALAVACGTEYVDPIQRLPVASADACSAWLTESEC
                     LTDAAHGCSFQPNAVGCKTTDPECNPGSCRAGDAFVRSRPAQGLWLLGEPYRFVGTVS
                     WGIAWGPCQVNTLPDQQTAVERVFDDLVDLKLTVLKVWAFQSYAGTSGTDYASFQRVV
                     AAARRAGVRLIFVLENQYEQDCTSGPPRNDSWYASGYASPYGSYALSLVDYARDLALH
                     FRDEPTLLAWEILHEGHTSDFNAMSTFTE"
     gene            complement(738..1649)
                     /locus_tag="VLJ38_22260"
     CDS             complement(738..1649)
                     /locus_tag="VLJ38_22260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42329.1"
                     /translation="MIDPGSEPLTVRLREEIESLGLEVMVVADGDPAEPLESRARVAG
                     AVAAIRITRRGSGSVDMTIVDRATGKTVSRHLPIATGSDPASSELVATRTVELLRASL
                     MELEAPHPARGDVPATPEVRALAAPVGEPRVTTLAVAAGPALVTSPALGVSVDVWVAV
                     LLRTQSGFGATARLVVPGTGGGLDIAEGHVSARAWQYRLGAVFEGPRLTRSLSPHFEA
                     GATLVTLTTAGAATAPFRGVEQHSLTWGPWIAAGLRYEFVPRVSLVVTAELALLFPET
                     VIRSDAREVATFGRPLVGASTGLEVAW"
     gene            complement(1758..>2451)
                     /locus_tag="VLJ38_22265"
     CDS             complement(1758..>2451)
                     /locus_tag="VLJ38_22265"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU42330.1"
                     /translation="GEERAVRAGETLRVFVSEHRLELANTSELADGRGAEPPATPPAP
                     AASVAGTGAAPALDQDDTKPSAAPTATPAISSRAPDWRQFARKGSLREAFGAAEAAGF
                     EAACQSASPAELLQLADGARLSGQPASARQALIRLRSAFPGDPRRAAAAFALGKVAFD
                     QTGAYAEAAEWFATSIREQPAGSLAREAAGRLIEARRRAGDAAGARRAAESYLTRYPD
                     GPHADLARSLVR"
BASE COUNT          399 a          848 c          850 g          354 t
ORIGIN      
        1 ctcggtgaag gtgctcatgg cgttgaagtc gctcgtatgt ccctcgtgca ggatctccca
       61 cgcgagaagc gtcggctcgt ctcgaaagtg aagcgccagg tcacgggcgt agtccacgag
      121 tgaaagcgcg tagctgccgt aaggtgacgc gtagccggag gcataccagg agtcgttgcg
      181 aggcgggccg gacgtgcagt cctgttcgta ttggttttcg agcacgaaaa ttagccgcac
      241 gccggcgcgc cgtgccgctg cgacgacgcg ctggaagctc gcatagtccg tgcccgacgt
      301 tcccgcgtaa ctttggaatg cccaaacctt cagcaccgtc agtttcaaat cgacgaggtc
      361 gtcgaacacg cgctcgaccg ccgtctgttg atccggcagc gtattgacct ggcaggggcc
      421 ccacgcaatg ccccacgaga cggtgccgac gaaccgatac ggctcaccga ggagccagag
      481 tccttgcgcg ggacggctcc gcacgaaggc gtcgcccgcg cggcagctgc cggggttgca
      541 ctctggatcc gtcgtcttac agccgacggc attgggctga aagctgcagc cgtgcgccgc
      601 gtcggtgaga cattcgctct cggtgagcca tgcgctgcac gcgtcggcgc tcgccacggg
      661 caagcgttgg atggggtcaa cgtactcggt gccgcacgcg accgcgagcg cgagcagcgc
      721 gacgactggc agctttctca ccatgcgacc tccaaccccg tgctcgcgcc gacgagcggg
      781 cgcccgaacg tcgcgacctc acgagcgtcc gagcggatca cggtctcggg aaacagcagc
      841 gcgagctccg ccgtgacgac gagagagact cggggcacga actcgtagcg aagccccgcg
      901 gcaatccaag gcccccacgt cagggagtgt tgctcgacgc cgcggaaggg agcggtcgcc
      961 gcgccggcgg tcgtgagagt aacgagcgtc gcgcccgcct cgaagtgtgg ggacagcgag
     1021 cgcgtgagac gcggaccctc gaagacggct ccgaggcggt actgccaggc gcgggcgctc
     1081 acgtgtcctt cggcgatgtc gagcccgccg ccggtgccgg gcacaaccag gcgtgcggtc
     1141 gcgccgaagc cactctgggt cctgagcagc actgcgaccc agacatcgac cgagacaccg
     1201 agcgcggggc tcgtcacgag cgcggggccc gccgcgacgg ccagcgtagt cacgcgcggc
     1261 tcgccgacag gtgccgcgag agctcgcacc tcgggcgtcg cgggaacgtc accgcgcgct
     1321 ggatgcggcg cctcgagctc catcaggctg gcgcgcagga gctcgaccgt gcgcgtggca
     1381 acgagctcac tcgaggcggg atcgcttccc gtcgcgatgg gtaggtggcg gctcaccgtc
     1441 ttgcctgtcg cgcggtcgac gatcgtcatg tcgacggaac cggaaccacg ccgggtgatc
     1501 cgaatcgccg cgacggcgcc cgcgactcgc gcccgcgact cgagtggctc cgcaggatcg
     1561 ccgtccgcga cgaccatgac ctcgagcccg agtgactcga tctcttcgcg caagcgcacg
     1621 gtcaggggct cgcttccagg atcgatcaac aggacccttg aaaccgaatt gtctgcccga
     1681 gaaacccctg cccagagcca tgatccggcg aggagcgaca agcacacgag accggcaccg
     1741 aaacgcaagc gtctaagtta gcgcacgagc gaacgcgcga ggtcggcgtg tggtccgtcg
     1801 gggtaacgcg tgaggtagct ttcagcggcc cgccgcgcgc ccgcagcgtc ccccgcgcga
     1861 cgccgcgctt cgatcaaacg tcccgccgct tcgcgggcca gcgagcctgc gggttgttcg
     1921 cgaatgctgg tcgcaaacca ttccgccgct tcggcgtacg cgcccgtctg gtcgaaggcg
     1981 acttttccga gcgcgaacgc agccgccgcc ctgcgcggat cgccgggaaa ggcgctgcgc
     2041 agccggatca gggcctgcct ggcgctggcg ggttgccctg acaagcgtgc gccgtcggcg
     2101 agttgcagga gctccgccgg tgaagcgctc tggcacgcgg cctcgaagcc ggcggcctct
     2161 gcagccccga aggcctcacg cagcgaaccc ttgcgcgcga attgtcgcca atccggcgcg
     2221 cgggaggaaa tcgccggcgt ggctgtcgga gcggcgctcg gcttcgtgtc gtcctggtcg
     2281 agcgccggag ctgctcccgt tccggcaaca ctcgcggcag gggccggcgg cgtcgcaggc
     2341 ggttccgcgc ctcggccgtc cgcgagctcc gacgtgttcg cgagctcgag ccggtgctca
     2401 ctcacgaaca cgcgcagcgt ctcaccggct cgaacggcgc gctcctcgcc g
//
LOCUS       DATIML010001293         1918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_563577, whole genome shotgun sequence.
ACCESSION   DATIML010001293 DATIML010000000
VERSION     DATIML010001293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_563577"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..997)
                     /locus_tag="VLJ38_22270"
     CDS             complement(<1..997)
                     /locus_tag="VLJ38_22270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42331.1"
                     /translation="MARIVNAENRSVERIDDGWEAVEIAAGEDAPASPEALAARDLPY
                     FPAAVPGTVAGALAALGRWDLDATKNFDASEWWYRRRFTSLPVADDETVLLHFDGLAT
                     LADVWLNGELVLRSDNMFCRHVLDVTTRLRSENELYVRFRSLEQALGERRPRPRFRTR
                     LVERQQLRWFRTTLLGRIPGWTPPVVPVGPYRGVRLERWRGPCVATARVRTGLSGTTG
                     RVSLEVSCRSRTEPPRRATASLGEVRFELERFVESDGTIVFRSELPVEAPRIWWPHTH
                     GEQARYSVSVALAGAGEIDLGSVAFRSIEAQTDAGAFSVRVNGIEVFCRGACWTTD"
     gene            complement(1011..>1918)
                     /locus_tag="VLJ38_22275"
     CDS             complement(1011..>1918)
                     /locus_tag="VLJ38_22275"
                     /inference="COORDINATES: protein motif:HMM:NF020467.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1839 family protein"
                     /protein_id="HSU42332.1"
                     /translation="EKNCYIDVWIEGLHAAGLEPVAALPFTLAADFEGDQWTFFKPSH
                     SDLTTLYGVVVQELNVWKSLLEHALYHLAKGRLIFTEADAFWLPDTSGTDYRTNHVKS
                     TIAIESVDVERRKLGYFHNASYYSLEGEDFARTFRLDLPADPTFMPFFAELARFDRLE
                     RLPPAELASRSRDLLRVWYARRPQQNPIQAFGDSFTRDLEGLKEQGIAAYHAYAFATV
                     RQCGACFELSAEYLRWLGRELGAEWSAPARHFESISNGAKALIMKAARAVVGKKAVDF
                     QPMFAELTDHWEHGMAELGTLLARH"
BASE COUNT          343 a          633 c          641 g          301 t
ORIGIN      
        1 cgtcggtcgt ccagcatgct ccacgacaga agacctcgat accgttcacc cgcacgctga
       61 aggcgccggc gtcggtctgc gcttcaatcg agcgaaacgc gacgctgccg aggtcaatct
      121 cgcccgctcc cgcgagtgcc acgctgacgc tgtagcgcgc ctgttcgccg tgcgtgtgcg
      181 gccaccatat ccggggcgcc tcgaccggaa gctcgctgcg aaacacgatg gtcccgtccg
      241 attcgacgaa gcgctcgagc tcgaagcgaa cctcgcccag gctcgccgtc gcgcgacggg
      301 gcggttcggt gcgcgagcgg caggagacct cgagcgaaac gcggccggtc gtgccggaga
      361 gcccggttcg aactcgggcc gtggccacgc acgggccgcg ccagcgttcg agacgcacac
      421 cccgataagg tcccaccggc acgacggggg gcgtccatcc gggaatgcgc ccgagcagcg
      481 tcgtgcgaaa ccatcggagc tgctgccgtt cgaccaatcg cgtgcgaaag cgtggccgcg
      541 ggcggcgctc gcccagcgct tgctcgagcg agcgaaagcg aacgtagagc tcgttttcgg
      601 agcgcaaacg ggtcgtgacg tcgagcacgt gccggcaaaa catgttgtcg ctgcgcagga
      661 cgagctctcc attgagccag acgtccgcga gcgtcgcgag gccgtcgaag tggagcagca
      721 ccgtctcgtc gtcagccacg ggtaagctcg tgaaccggcg ccggtaccac cactcggagg
      781 catcgaaatt cttcgtcgcg tcgagatccc agcgtccgag cgcggcgaga gcaccggcca
      841 ccgtgccggg caccgcagcg gggaaatacg gaagatcgcg agccgccaac gcctcgggcg
      901 acgcgggcgc gtcctctccc gccgcgatct ctaccgcctc ccaaccgtcg tcgattcgct
      961 cgacgcttcg attttcggcg ttgacgatgc gcgccatgac cgaacgacgg tcagtgacga
     1021 gccagcagag tgccgagctc ggccatgccg tgttcccaat ggtcagtgag ctcggcgaac
     1081 atcggctgga agtcgaccgc cttctttccg accacggctc gcgcggcttt catgatcagg
     1141 gccttggcgc cgttggaaat gctctcgaaa tgccgcgccg gggccgacca ctcggcgccg
     1201 agctcgcgcc cgagccagcg cagatattcg gccgaaagtt cgaagcacgc gccgcattgg
     1261 cgcaccgtcg cgaacgcgta cgcgtggtac gccgcgatgc cctgttcctt caggccctcc
     1321 agatcgcgag tgaacgagtc accgaacgcc tgaatcggat tttgctgggg ccggcgcgca
     1381 taccaaacgc gcaagaggtc gcgcgaccgc gaagcgagtt cggccggcgg caggcgctcc
     1441 agccggtcga agcgggcgag ctcggcaaag aacggcatga aggtggggtc ggcgggtagg
     1501 tcgagccgga acgtccgcgc gaaatcctcc ccttcgagtg agtagtagct cgcgttgtga
     1561 aagtagccga gcttgcgccg ttcgacgtcg acgctttcga tggcgatcgt cgatttgacg
     1621 tggttcgtcc gatagtcggt gccgctcgtg tcaggcagcc aaaacgcgtc cgcttcggtg
     1681 aagatcaagc ggcccttggc caagtgatag agcgcgtgct cgaggagcga cttccagacg
     1741 ttgagctcct gcacgacgac gccgtacagc gtcgtgaggt cggagtgaga aggcttgaag
     1801 aacgtccatt ggtcgccctc gaagtccgcc gcgagcgtga aaggcaacgc ggcgacgggc
     1861 tcgaggcccg ccgcgtgcag tccctcgatc cacacgtcga tgtagcagtt cttctcga
//
LOCUS       DATIML010001294         2220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1431684, whole genome shotgun sequence.
ACCESSION   DATIML010001294 DATIML010000000
VERSION     DATIML010001294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1431684"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..810)
                     /locus_tag="VLJ38_22280"
     CDS             complement(31..810)
                     /locus_tag="VLJ38_22280"
                     /inference="COORDINATES: protein motif:HMM:NF018649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HSU42333.1"
                     /translation="MTAAALVALAAVLGCGVLGWIVSLLKHDASIADVFWGPLFVVIA
                     VTMLVLGSGTGPRRLLVLALVAAWAARLTWHLARRNLGQGEDARYRAMRAHHGKRFAI
                     ISLFTVFLCQPLLAWIIAAPVIAVMQHASAAWLTPSDALGTLVFVTGFVLETLADRDL
                     TKFKQDPANRERVLDRGLFRYSRHPNYFGEFVLWWGLGSFGLAVGSVASLVGPVLISV
                     LLLRVSGVTLLESTIVSRRPDYARYQATTNAFFPGPPRGAP"
     gene            complement(807..1367)
                     /locus_tag="VLJ38_22285"
     CDS             complement(807..1367)
                     /locus_tag="VLJ38_22285"
                     /inference="COORDINATES: protein motif:HMM:NF022537.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2878 family protein"
                     /protein_id="HSU42334.1"
                     /translation="MPPQSAELTHARVPSPRWLAIAADFVANQAAWWWCVLAARAGSP
                     TGLLGPVAYLVGQLVFRPNRRRAILGLAAAGALTGLAGDFALVRAHLLAFPPTFAEVA
                     PFMLCLWAMFAVSLTASAAFLAQAPAWGAALFGAVAGPLAYSAGERLSVLTVREAGVA
                     AVALEWMIAVPWLAYCARRAEREAST"
     gene            complement(1348..2007)
                     /locus_tag="VLJ38_22290"
     CDS             complement(1348..2007)
                     /locus_tag="VLJ38_22290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42335.1"
                     /translation="MTARVEGVASSDDSAALATRSRRRAGWAGFAAVAGNLLGVACLK
                     NMPSAYRLGRLEEWASAVRTEPASTVASAVCFATGLAALSSWALELGHGIGTPRARKA
                     ASLIAATALVNAAGSLLPIPAALGSGHTVAFLRTSLSVDALFNLGLGVGLLGFAVELR
                     RPVAHRVLAFAAGATSIPVAGQAVWDGAASVLYVAAPLWLSLIAITSFDWLRSNASAK
                     R"
     gene            complement(2004..>2220)
                     /locus_tag="VLJ38_22295"
     CDS             complement(2004..>2220)
                     /locus_tag="VLJ38_22295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42336.1"
                     /translation="IRPLASPAPGVVRLRIEINNWLLRQLAPHVEVDYELKSRRLLEY
                     RGVSNLEAPDGSPQKVVIRYRYPEAAS"
BASE COUNT          419 a          767 c          771 g          263 t
ORIGIN      
        1 cggcttcggc ggtcgtgagg agctcgtcgc tcacggcgcc ccgcgcggcg gtccggggaa
       61 aaatgcattc gtcgtggctt ggtagcgcgc gtagtccggg cgccggctca cgatcgtgct
      121 ctcgagcaac gtcacgcccg agacgcgcaa gagcagcacg ctgatgagca ccgggcccac
      181 gagcgacgcg acgctgccca cggccaaacc aaaggagccg agcccccacc acagcacgaa
      241 ctcgccgaaa tagttgggat gccggctgta ccggaagagt ccgcggtcga gcacgcgctc
      301 gcgattcgcg ggatcctgct tgaacttcgt caggtcgcga tcggccagcg tctcgagcac
      361 gaagccagtc acgaacacga gggtacccag cgcatcgctc ggggtgagcc aggcggcaga
      421 agcatgttgc atcacggcga tgaccggagc cgcgataatc caggcgagca acggctggca
      481 caagaacacc gtgaaaaggc tgataatcgc gaaccttttg ccgtgatggg cccgcatcgc
      541 gcggtagcgc gcgtcctcgc cttgtccgag attgcgccgg gcgaggtgcc acgtgaggcg
      601 ggccgcccag gcagcgacga gggcgagcac caacaagcgt cgcggtcccg ttcccgagcc
      661 gagcacgagc atcgtcaccg cgatcacgac gaagagcggg ccccagaaga cgtccgcgat
      721 gctcgcgtcg tgtttgagca ggctgacgat ccagccgagc acgccgcagc cgagcacggc
      781 cgcgagcgcg acgagcgcgg ctgcggtcac gtcgaggcct cccgttcggc gcgccgcgcg
      841 cagtaggcca gccacggcac ggcaatcatc cactcgagcg cgaccgcagc cacgccggcc
      901 tcacggacgg tgagtacgga caggcgttcc ccagccgagt acgcgagcgg tcctgcgacg
      961 gcgccgaaca gcgcggcccc ccacgccggc gcttgcgcga gaaacgccgc ggaggcggtg
     1021 agtgacacag cgaacatcgc ccacaggcag agcatgaaag gcgcgacttc ggcgaacgtc
     1081 ggcggaaagg ccagcaggtg agcccgcacg agcgcgaagt caccggcgag ccccgtgagt
     1141 gcgcccgccg ccgcgagccc cagaatcgcg cggcgcctgt tcggccgaaa aacgagttgc
     1201 ccgacgaggt atgccacggg tccgagcaga cccgtgggac tcccggctcg cgccgcgagc
     1261 acgcaccacc accaggctgc ctggttggcg acgaagtcgg ccgcgatggc gagccagcgg
     1321 gggctcggaa cgcgggcgtg cgtcagctca gcgctttgcg gaggcattgg agcgcagcca
     1381 gtcgaagctc gtgatggcga tgagcgacag ccacagcgga gcggcgacgt agagcacgga
     1441 cgccgcgccg tcccaaactg cttgccctgc gaccggaatg ctcgtcgcac ccgcagcgaa
     1501 cgcgagcacg cggtgcgcga cgggacgcct gagctcgaca gcgaaaccga gcaaacccac
     1561 gccgagccca agattgaaca gagcatcgac gctcaggctc gtgcgcaaga acgcgaccgt
     1621 gtgccccgaa ccgagcgcgg cagggatcgg taggagagac cctgccgcgt tcaccagcgc
     1681 cgtcgccgca atgagcgagg cggctttgcg tgcgcgcggc gtgccgatgc cgtgcccgag
     1741 ctcgagtgcc caactcgaga gcgccgccag gcctgtcgca aagcacacgg cgctcgcgac
     1801 cgtactcgcg ggctcggtgc gaacggcgct cgcccactct tcgagccggc cgagccgata
     1861 ggccgacggc atgttcttga ggcaagcgac gcccagcaga ttgccggcaa cggcggcaaa
     1921 tccagcccag ccagcccggc gccgcgagcg cgtcgcaagc gccgcggaat cgtcggacga
     1981 cgcgacccct tcgacacgcg ccgtcacgac gccgcctccg ggtagcggta gcggatgact
     2041 accttttggg gtgagccgtc cggcgcctcg aggttcgaga ccccacgata ctcgagcaag
     2101 cgtcgcgact tgagctcgta gtccacttcg acgtgcggcg cgagctgccg caagagccag
     2161 ttgttgattt cgatgcgcag ccgaacgacg cccggcgccg gggacgcgag cggtcggatg
//
LOCUS       DATIML010001295         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3161890, whole genome shotgun sequence.
ACCESSION   DATIML010001295 DATIML010000000
VERSION     DATIML010001295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3161890"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VLJ38_22300"
     CDS             <1..457
                     /locus_tag="VLJ38_22300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42337.1"
                     /translation="NNRYQFGVDFKTGQNLYWKLSPPNGPTTEVRASSSSPRCADGVL
                     RQCARYCQATLASECADDFGANWDTCFNPCVDGYDNQFAGTSCADEWTNYLSCVASTP
                     PAEANWGCQPGFDTLPRATACDPLITIALDCLYPPEPTVATGEQVPSVR"
     gene            complement(454..1185)
                     /locus_tag="VLJ38_22305"
     CDS             complement(454..1185)
                     /locus_tag="VLJ38_22305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42338.1"
                     /translation="MLRSLTFHLTLAFALASVTASERARACGVSATGVASCSLAEHRD
                     ATGPHFSLGATGTYTDTALRFGTSLRATQTRAAVFAVLAYLPTRSLALELGVGASFAG
                     SLTLPDGKYEFFPGPSASLGVASRFLDAPSYFALLTTVASFSASHTELAGAARASYTA
                     FDLRLGVEFGLNLIDVLHPYVLARAFGGPVYWTYAGESVTGTDVHHYQVGAGLAAGLP
                     GRLSLFVEGVPLGERAISGGLGLAF"
     gene            1422..>2054
                     /locus_tag="VLJ38_22310"
     CDS             1422..>2054
                     /locus_tag="VLJ38_22310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42339.1"
                     /translation="MRSWVGSLVFVLGTALFGAAACGDAAVTRQPEKFGQHGGTGGKS
                     SGNSGASGGTGNVIHLGDGGADGSTCPTSCAELDADCGFVTDTKCGGVVECGDCADGE
                     VCGAETPSQCGKATSGSGGAGGGGGSGNCTASSCEDLNADCGFVTDSKCGGVVDCGSC
                     DKGQTCGFGGPNRCGDNDGGGSCTVDPATTCKGRGATCGHVADNCGNDLDC"
BASE COUNT          366 a          679 c          718 g          291 t
ORIGIN      
        1 caacaatcgc taccagttcg gcgtggattt caagacgggc cagaacctct actggaagct
       61 cagccccccg aacggtccga ccacggaagt ccgtgcttcg tcctcctcgc cccgctgcgc
      121 cgacggcgtc ttgcgccagt gcgcccggta ctgccaggcg acacttgcgt ccgagtgcgc
      181 cgacgacttc ggcgccaact gggacacgtg cttcaatccg tgcgtcgacg gctacgacaa
      241 tcaattcgcc ggcacgagct gcgcggatga atggaccaac tacttgagct gcgtcgccag
      301 cacgccgccc gccgaagcga actggggttg ccaaccgggc ttcgacacgc tgccgcgggc
      361 cacggcctgc gacccgctca tcaccatcgc gctcgactgc ttgtacccgc cggagccgac
      421 cgtcgctacg ggggagcaag tgccgagcgt gcgctaaaac gcgagcccga gtccgcccga
      481 aatcgcgcgc tcgccgagcg gcacgccttc gacgaacaaa ctcagtcgtc ccggcaggcc
      541 ggcggcgagc ccggcgccca cttgataatg atgcacgtcg gtgcccgtga cgctctcacc
      601 cgcgtaggtc caatacacgg gaccaccgaa cgcgcgcgcg aggacgtacg gatgaagcac
      661 gtcgatcagg ttcagcccga actccacacc taacctgagg tcgaaagccg tgtagcttgc
      721 gcgcgcggcg ccggcgagct cggtgtgact ggcgctgaac gacgcgacgg tcgtgagcag
      781 cgcgaaatag ctcggcgcgt ccaagaagcg cgaggcgacg ccgagcgacg cgctcggccc
      841 cgggaaaaat tcgtactttc cgtccggcag cgtgagcgac cccgcgaaac tcgctccgac
      901 gccgagctcg agcgcgagcg aacgggtcgg cagatacgcg agcacggcga acacggcggc
      961 gcgtgtctgc gtggcgcgca gcgacgtacc gaagcggagc gcggtgtcgg tgtaggtgcc
     1021 tgtcgcgcct aggctaaagt gcggaccagt ggcgtcgcga tgctccgcga gcgagcacga
     1081 agcgaccccc gtagcggaga cgccgcacgc ccgagcgcgt tcgctcgccg taaccgacgc
     1141 gagcgcgaac gcgagcgtga ggtgaaacgt gagcgaacgc agcatgccga gcgagcgtaa
     1201 gccaggtgcg gcgcgtgcgc gagtgtctca cgcgcacgca cctagcacta ccgtcggcgt
     1261 cttggagaac gtcgccgagc caggcaaatg cggacgcgaa tactaatcta acgggtggat
     1321 cgcgccgtcg tctcacgcgt gaacaaaccc gaattgtgct ctgcgcaggt cgcgcgcagc
     1381 gtgatgagcc gcgcctgctc tcggcgcgca cgtaggtcag catgagaagc tgggtcggct
     1441 cgctcgtctt cgtgctgggt accgcgctct tcggggcggc cgcttgcggt gatgccgcgg
     1501 tcacgcgtca accggaaaaa ttcgggcagc acggcggcac gggcggcaaa tcctcgggca
     1561 acagcggcgc gagcggcggc acgggcaacg tcattcacct cggcgacggc ggcgctgacg
     1621 gttcgacctg cccgacgagc tgcgccgagc tcgacgccga ctgcggcttc gtcacggata
     1681 cgaagtgcgg cggtgtcgtc gaatgtggcg attgcgccga cggtgaagtc tgcggggccg
     1741 agactcccag ccagtgcggg aaggcgacgt ccggatccgg cggcgccggc ggcggcggcg
     1801 gctcgggcaa ctgcacggcg tcgagctgtg aggacctgaa cgcggattgc ggctttgtca
     1861 cggacagcaa gtgcggcggt gtcgtcgatt gtggttcgtg tgacaagggg cagacctgcg
     1921 gcttcggtgg gccgaaccgc tgcggcgaca acgacggcgg cggctcgtgc accgtcgatc
     1981 cggcgacgac ctgcaaggga cgcggggcga cgtgcgggca cgtcgcggac aattgcggca
     2041 acgacctcga ttgt
//
LOCUS       DATIML010001296         3060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4318050, whole genome shotgun sequence.
ACCESSION   DATIML010001296 DATIML010000000
VERSION     DATIML010001296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3060
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4318050"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /locus_tag="VLJ38_22315"
     CDS             <1..831
                     /locus_tag="VLJ38_22315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42340.1"
                     /translation="GTGGSSTGGGTNATGGTGTGGTHATGGTNGAGTSGSGGSGALGS
                     SGDGTGGGGEGGGPEAGAGGQGGAAEPHAALCRYHCTDSTQCGQGSICNDAGLCVSAL
                     ALTPSCNANDECMPEASFWSPRCTSDADCAAGTQACVAWGGVGWCARLADSPCFSGAA
                     TTLTKFGSSDQVSVCAIPGVCERHACAMTCAVDGDCFDGTGPTCNTTTHFCGGCTAET
                     DCFGAGVSHCDLPTGTCQCASNADCSGIPGTDTCVNGTCGCSSASLCTAYPDATVACE
                     "
     gene            946..2622
                     /locus_tag="VLJ38_22320"
     CDS             946..2622
                     /locus_tag="VLJ38_22320"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSU42341.1"
                     /translation="MVSEGDLLAGKYRVESVLGEGGMGYVVAALHEQLEQRVAVKLLV
                     PELAQDQDAAARFLREARAAVRIQSEHVARVLDVGELEGGAPYMVMEFLSGRDLAHEL
                     EARSTFEIGPAIDYVLQACEAVAEAHAIGVIHRDLKPANLFLTRRADGSPLVKVLDFG
                     ISKALASSSGPVSASLTAAHTLLGSPAYMSPEQARRPKDVDIRTDIWAFGVILYEFLT
                     GDTPFHGDVPLEVITAALSDPMPSIAAVRSDVPRELEAVVAKCMEKRAEDRYQTIAEF
                     AEALRPFAPSESMRSISRISGIIRSVAPPPPSPETGSTTLRSAGARTPPQAEAAAPAL
                     EPVTRKDTPARRETPRRRTPGGSEPTELAHDSIQPQTRAAKDTQTDFGRSQPASHRSR
                     RRVIFVVAGVAATALVVGGLTLRFAADNSTPTATTDTSPRPAPAGQAEAKTNGSVPSS
                     APPTIDVTPGVAIDTTGPAKTTGSVAPAAAAVAASAVGQAPSNASAASAKVSHPPAAA
                     PRVEPVASVRAVGGAPQPSVAKSVAPKRGVPNGRDTPAPADAEDPLENRH"
BASE COUNT          464 a         1079 c         1085 g          432 t
ORIGIN      
        1 ggcacggggg gctcgagcac gggcggcggc accaacgcga ccggtggcac cggcacgggc
       61 ggcacccacg caaccggcgg aacgaacggc gccgggacga gcgggtccgg agggtccggc
      121 gcgctcgggt cgagcggcga cggcacgggg ggcggcggcg agggcggagg accggaagcg
      181 ggcgcgggtg gacagggcgg cgcagcggaa ccgcacgcgg cgctctgccg ctatcactgc
      241 acggacagca ctcagtgcgg ccagggctcg atctgcaacg acgccgggtt gtgtgtctcg
      301 gcgctcgccc tgacgccctc gtgtaacgcc aacgacgagt gcatgccgga ggcgtcgttc
      361 tggagtccac ggtgcacgag cgacgctgat tgcgcggcgg gaactcaggc ctgcgtcgcc
      421 tggggtggcg tcggctggtg cgcgcgtctc gcggattcgc cctgtttctc tggcgctgca
      481 acgacgctca ccaagttcgg atccagcgac caggtttcgg tctgtgcgat tccgggcgta
      541 tgcgagcgcc acgcctgcgc gatgacctgc gccgtcgatg gcgactgctt tgacggcacg
      601 gggccaacct gcaacaccac gacgcacttc tgtggcggct gcacggcgga gaccgattgc
      661 ttcggagccg gtgtttcgca ctgtgacctg ccgaccggca cgtgtcagtg cgcgagcaac
      721 gccgattgct ccggcattcc aggcacggac acctgcgtga acggcacctg cggctgctcg
      781 agcgcgagcc tctgcacggc ctacccggac gcgaccgtcg cgtgtgaata aggcggcgaa
      841 cccggccgag ggcgtccgca gggcacgctg gagctaagaa gttaccgcgg gttagcgcgg
      901 tcctgcgcct ggcaggccga aagcgcgtgg tatgctcagg gctccatggt gtccgagggc
      961 gatctcctgg ccggcaagta ccgggtggag agtgtgctcg gcgagggcgg catgggctac
     1021 gtcgtcgctg cgctgcacga gcaactcgag cagcgcgttg ccgtgaagtt gctcgtgcct
     1081 gagctcgccc aggatcagga cgcggccgcg cgatttttgc gcgaggcgcg cgctgccgtg
     1141 cggatccaga gcgagcacgt cgctcgcgtg ctcgacgtgg gcgagctcga gggcggcgcc
     1201 ccgtacatgg tgatggaatt cttgtcggga cgcgacctcg cgcacgagct cgaggcacgc
     1261 tcgacgttcg aaatcggccc ggccatcgac tacgtgctcc aggcctgcga ggccgtcgcg
     1321 gaggcccacg ccatcggagt catccatcgt gatctcaagc cggcgaatct ctttttgact
     1381 cgccgcgccg acggctcgcc cctcgtcaag gtcttggatt tcgggatttc gaaggcgctc
     1441 gcgtcctcat cgggtccggt cagcgcgtcg ctcacggcgg cgcacacgct actcggctcg
     1501 cccgcgtaca tgtcgcccga gcaagcgcgg cgtccgaagg acgtcgacat ccgcaccgac
     1561 atctgggcgt tcggcgtgat cctctacgaa tttttgacgg gcgacacacc gtttcacggc
     1621 gacgtgccgc tcgaagtgat cacggcggcg ctctccgatc cgatgccgag catcgcggcc
     1681 gtgcgctccg atgtcccgcg cgagctcgag gccgtcgtcg caaaatgcat ggaaaagcgg
     1741 gcggaggatc ggtaccagac gatcgccgag ttcgcggagg cgttacgccc attcgctcct
     1801 tccgagtcga tgcgctcgat ctcgcgcatc tccggcatca ttcgctcggt cgcgccgcct
     1861 ccaccctcgc ccgagacagg ttcgacgacc cttcgcagcg cgggcgcgcg cacgccaccg
     1921 caagcggagg cagcagcacc ggcgctcgaa cctgtcacgc gcaaagacac gcccgcccgt
     1981 cgtgagactc cgcggcgccg tacgccgggc ggcagcgaac ccacggagct agcgcacgat
     2041 tcgatccagc cgcagacgcg cgcagccaaa gatacgcaaa cggattttgg ccgttcgcaa
     2101 ccggcgagtc atcgctcgcg ccgccgcgtg attttcgtcg tggccggcgt cgccgcgacg
     2161 gcgctcgtcg ttggtgggct cacgctgcgc ttcgcggcgg acaactcgac cccgaccgcg
     2221 acgaccgaca catccccgcg accggcgccc gccggccaag ccgaagcgaa aacgaacggc
     2281 agcgttccga gcagcgcgcc gcccaccatc gacgtgacgc ccggcgtagc catcgacacc
     2341 acgggcccgg ccaagacgac ggggagcgtc gcgccggctg ctgctgccgt cgcggcgagc
     2401 gcggtgggac aggcgccgag caacgcaagc gccgcaagcg cgaaggtgtc gcatccgccg
     2461 gccgccgcac ctcgcgtcga acccgtcgcg agcgtccgag cggtaggagg cgccccgcag
     2521 ccctcggtcg cgaaatcagt cgcgccgaag cgcggcgttc cgaacggacg agacacgccc
     2581 gcgccggcgg acgcggaaga tccgctcgag aaccgacact aaaatcacga gcggccaagc
     2641 cattcccgcg cgaggcgctc ccgaaacaag cgcgcatccg ccgctggtgc gcgagcggcg
     2701 cggtggaact cgcgagctag aaccggcgcc gtcgccaccc gtgctggtgg cgccgggtgc
     2761 gccgccttcg ctcggaggcg cgcccccttc gctcgcgggt gcgccgccgc cgagctcggc
     2821 ggaactgccg cccgccgcgt ccggcgctcc ggcactgggc ccgcccgtcc cggcgttgcc
     2881 tgctcggccg ctcgtaccga ctccgcccgc tgcgggtgcg ccgcccgcgg attcgctggg
     2941 cgcgccgccc ccgcccgcat cggacatgga tccgggttcg tctgggggcg tttcgggtgt
     3001 cggctcgtaa ccagcggccg tgaaggcctg ggcgagcaag agctggaagt cggggacgtg
//
LOCUS       DATIML010001297         1762 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5188530, whole genome shotgun sequence.
ACCESSION   DATIML010001297 DATIML010000000
VERSION     DATIML010001297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5188530"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1762
                     /locus_tag="VLJ38_22325"
     CDS             <1..>1762
                     /locus_tag="VLJ38_22325"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU42342.1"
                     /translation="MFLWWGPELIQFYNDAYLPSFGRGKHPAAMGQRGADCWQEIWPI
                     IHPQIVDVLEQGKASWNENQLVPIQRNGRIEEVYWTYGYSPVFDESDQIRGVLVVCTE
                     TTAGVLAVRRLGFIRALASALNDAENFEDIAEITARGLAQAPLDMPYSVINMEGAPAI
                     CVGLAGTDSPALFPPETDGPLALHELERAVPCLPWPERVSRAVVHRFDGRPAGTLTFG
                     LSPRLPFDAAYASFLQQVAEQVAIAHSRISIGIERRRLLVQAPVAAALMTGPEHVFEI
                     ANPLYTAMVGREVLGRRFRDVFPELLEQELPRILDRVYQLGEPFKTQELRVPLEHKEN
                     GVVEDHFFNFNLEPIRDVRGNVYGMMVMATDITPQVTARLALERRSAERAELLEAAQV
                     AARAKDEFFAMLGHELRNPLAPILTALELMKTKPAGHEREREIIERQALHLVRLVDDL
                     LDVARIAEGKVHLKRQRVALAEVVATAIETASPLLETHGHALHVQVSPHGLDVDADPT
                     RLAQVIANLLTNAARYTNPGGSIRIRAWQAGVRLVLRVEDNGIGIAREQLPRVFERFF
                     QATRSDERVHGGLGLGLALV"
BASE COUNT          307 a          595 c          567 g          293 t
ORIGIN      
        1 cgatgtttct gtggtggggt cccgagctga tccaattcta caacgacgcg tatctgccga
       61 gcttcggccg gggcaagcat ccggcggcga tgggccagcg cggcgcggat tgctggcagg
      121 agatctggcc gatcatccac ccgcagatcg tcgacgtact cgagcagggt aaggcgagct
      181 ggaacgaaaa ccagctcgtg ccgattcagc gcaacggacg catcgaggaa gtctactgga
      241 cgtacggcta ttcgcctgtc ttcgacgaga gcgaccagat ccgcggcgtg ctcgtcgtct
      301 gcaccgagac cacggccggc gtgctcgccg tgcgtcgcct cggcttcatc cgtgcgctcg
      361 ccagcgccct gaacgacgca gagaatttcg aggacatagc ggagatcacg gcgcgcggct
      421 tggcccaagc gccgctcgac atgccctaca gcgtcatcaa tatggaaggc gcgccagcga
      481 tctgcgtcgg actcgcaggc acggacagcc cagcgctttt tccaccggag accgacggcc
      541 ccttggcgct gcacgagctc gagcgcgccg tgccgtgtct gccctggccc gagcgcgtct
      601 ccagagcggt ggtgcatcgc ttcgacggca ggcctgcggg aacgctcacc ttcgggctca
      661 gcccgcggct tccattcgac gctgcctacg ccagcttttt gcagcaagtc gccgaacagg
      721 tcgcgatcgc ccacagccgc atttcgatcg gcatcgaacg ccgccgcctg ctcgtccaag
      781 cgcccgtcgc ggccgcgctg atgacgggac cggagcacgt cttcgagatc gccaatccgc
      841 tttacacggc gatggtgggc cgtgaagttt tgggccggcg tttcagggac gtcttccccg
      901 agctcctgga gcaggagctg ccgcgcatcc tcgatcgcgt gtaccagctc ggtgagccgt
      961 tcaagacgca agagctgcgc gtgccgctcg agcataaaga gaacggcgta gtcgaagacc
     1021 actttttcaa tttcaacctc gagccgatcc gcgacgtgcg cggcaacgtc tacggcatga
     1081 tggtcatggc caccgacatc actccgcagg tcacggcacg tctcgcgctc gagcgacgca
     1141 gcgcggagcg tgccgagttg ctcgaagccg cgcaggttgc cgcgcgcgcg aaggacgagt
     1201 ttttcgccat gctcggccac gagctcagaa atccgctcgc gccgattctc acggccctcg
     1261 agctgatgaa gacgaagccg gccggtcacg agcgcgagcg cgagatcatc gagcgccagg
     1321 cgctgcacct cgtccgtttg gtcgacgatc tgctcgacgt ggcccgtatc gccgaaggca
     1381 aggtgcactt gaagcggcaa cgggtcgcgc tcgcggaggt ggtcgccacg gcgatcgaaa
     1441 cggctagccc gctcctggaa acgcacggcc acgctttgca cgtgcaggtg tcaccccacg
     1501 gcttggacgt cgatgcggat cccacgcggc tcgcgcaagt catcgccaac ctactcacca
     1561 acgcggcacg ctacacgaac cccggcggct cgattcgcat ccgcgcgtgg caggcgggtg
     1621 tcaggctcgt attgcgcgtg gaggacaacg gcatcggcat cgcgcgcgaa cagctgccgc
     1681 gcgtcttcga acgctttttc caggccacgc gctcggacga gcgcgtgcac ggagggctcg
     1741 gcctcgggct cgcgctcgtc aa
//
LOCUS       DATIML010001298         3985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1141762, whole genome shotgun sequence.
ACCESSION   DATIML010001298 DATIML010000000
VERSION     DATIML010001298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3985
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1141762"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VLJ38_22330"
     CDS             complement(<1..215)
                     /locus_tag="VLJ38_22330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42343.1"
                     /translation="MGPSLHLVASEPADGAGLDCDRTDPGCGVPTDVTLALSFDRFLL
                     PDSAIRQSILFYTGEPENPVPPPSNTRP"
     gene            complement(293..547)
                     /locus_tag="VLJ38_22335"
     CDS             complement(293..547)
                     /locus_tag="VLJ38_22335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42344.1"
                     /translation="MKELVKYLFGNLYFDFQGEVTVEQVREFLREDDSREARQLLSKI
                     IEENGVEDLLITLADILKDHIRTGVSEQIIREQLSTYSES"
     gene            complement(647..1996)
                     /locus_tag="VLJ38_22340"
     CDS             complement(647..1996)
                     /locus_tag="VLJ38_22340"
                     /inference="COORDINATES: protein motif:HMM:NF025875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HSU42345.1"
                     /translation="MKRQRDLGFYVLLAACALSLLVAWFAPVRADTSMPPPAPVASAP
                     VHGLAPLPGGRAVPEAWRPPGAQGDAAPSPVIYPAQHLGLRFDHARHIALGATCATCH
                     DKAKTSRSSADSLLPAGTRCDACHGTNHRAEIVTAGAESIGTCATCHLGYRPVDGQLV
                     LRTSLPRPHLRFDHAVHAERGIDCAACHGAVGSLELATVDQLPRMRGCFGCHTADRPN
                     AGQPSRACPTCHLTEHDTLLVTTFAEGRLEPPRWLHDAEHGPDWIERHKRIAGDDSRF
                     CASCHAERFCTGCHDGRVRPRQVHPNDFLNMHAIAARQNSPTCTSCHHQQSFCLGCHQ
                     RAGVTMSGPLGNIAERGRFHPPPAVWTEGPRGPGHHAWEAERNLNACVSCHTERDCVS
                     CHATATVGGYGSGSSSGRHTDPHPAGFVARCGRALRQNARPCLVCHDPADPELASCR"
     gene            complement(1993..3498)
                     /locus_tag="VLJ38_22345"
     CDS             complement(1993..3498)
                     /locus_tag="VLJ38_22345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42346.1"
                     /translation="MRRSVPVAAACVACVVWCFGERRASAYESEVDASVATQFYSLES
                     PYGEPLLRRRRYTNTLGIALYDLQGERAPRGPVLSFRSRVRLDADLGQDPAERDPSSA
                     RFVPGLEQAPFDLMYAYLEGDRYFGGGFGFKLGRQYVADVLGWWSFDGAEVALATPAH
                     LRLEAYGGLEQRSGLPLLTTPRFQADGVARGSRDDLRSDQWTSYLNQAAVAPAVGVAL
                     ETSDLWWLHARVTYRRVTNRDSVVVSPFLPADGVLRTVTEDRISTERVGGSLRLQPVS
                     FGALSGSIVYDFYAGLVSEQAVALDAYASARLTLGADYERLVPTFDADSVFNWFAHSA
                     MTSYTGRTVYTFSRRLDAALNFGAREYQTLGDPATYATSSDESAVRRELDPFALLFGR
                     YRFNDGSVSLRSQAELGARGHRVGADVTTRKTFANGYYDGLVVLSLYDFKDELRADRY
                     ATSFSYVLGGGLRPGGLGDRARLGLEWEHTMNRLVGQRYRVLATLELTVLR"
     gene            complement(3571..>3985)
                     /locus_tag="VLJ38_22350"
     CDS             complement(3571..>3985)
                     /locus_tag="VLJ38_22350"
                     /inference="COORDINATES: protein motif:HMM:NF018917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HSU42347.1"
                     /translation="VERSAGAPPRAPLGFWHELGCGVRSVAGALCVAAPLYALLWLVG
                     FVFPPATVVTLPLGAIAYALFVAWSLFDYPLTLRGFGFYARLALLYEHFACVAGFGAV
                     FALAFTLPCCAVALLPIGTVAATRLTCRLLFGTPA"
BASE COUNT          686 a         1292 c         1461 g          546 t
ORIGIN      
        1 ggtcgcgtat tgctcggcgg cggcacggga ttttcgggct cgccggtgta aaaaaggatg
       61 gactgccgga tggcgctgtc cggcaagagg aagcgatcga agctcagcgc gagcgtcacg
      121 tcggtcggaa cgccgcaacc cggatccgta cggtcgcagt cgagaccggc gccgtcggcc
      181 ggttccgacg ctacgaggtg aagcgacggg cccatcccgt gctcggtcgc tctaggccct
      241 aggtcacagc cgcaaagagc gaggcacgcg agggcccccc aataaaaccg cttcagctct
      301 ccgagtaggt ggagagctgc tcccggatga tctgctcgct gacgcccgtc cggatgtgat
      361 ccttcaaaat gtcggccagc gtgatgagca ggtcctccac accgttctct tcgatgatct
      421 tcgagaggag ctgtcgtgcc tcgcggctgt cgtcttccct caggaattcg cgcacttgct
      481 cgaccgtgac ttcgccttga aagtcgaagt acaagtttcc gaacaggtac tttaccagtt
      541 ccttcactaa gggcctcctt cgccggacgg cagtcatacc cacgcggtgt aacctcgcgc
      601 aagcggattc cctcgatggg cctggatttt cgcgcgcttg gcgacttcag cggcacgagg
      661 cgagctccgg gtcggcagga tcgtggcaga cgaggcaggg ccgggcgttc tggcggagcg
      721 cacggccgca gcgcgccacg aagccggccg gatgaggatc cgtgtgccgg ccggacgacg
      781 agccgctccc ataaccgccg acggtagccg tggcatggca gctgacgcag tcgcgctccg
      841 tgtggcagct cacgcacgcg ttgaggttgc gttcggcctc ccacgcgtgg tggcccggtc
      901 cacgcggacc ctcggtccaa acggcaggcg gcggatggaa gcggcctcgc tcggcgatgt
      961 tgccgagggg tccggacatg gtgacgccgg cccgctggtg acagccgagg caaaaggatt
     1021 gctggtggtg gcagctcgta caggtggggc tgttttgacg ggccgcgatc gcgtgcatgt
     1081 tgagaaagtc gttcgggtgc acctggcggg gacgcacgcg accgtcgtgg cagcccgtgc
     1141 agaagcgctc ggcgtgacag ctcgcacaga agcgactgtc gtcgccggcg atgcgcttgt
     1201 ggcgctcgat ccaatcgggg ccgtgttcgg cgtcgtggag ccagcgcgga ggttcgaggc
     1261 gcccttcggc gaaagtcgtg acgagcagcg tgtcgtgctc ggtcaggtgg caggtggggc
     1321 aggcgcgcga cggttgcccg gcgttcggcc gatccgcggt gtgacaaccg aagcagccgc
     1381 gcatgcgcgg cagctgatcc accgtcgcaa gctcgagcga accgacggca ccgtgacacg
     1441 cggcgcagtc gatgccgcgc tcggcgtgaa cggcgtgatc gaagcgcagg tgcgggcgcg
     1501 gcagcgacgt gcgcaagacg agttgaccgt ccaccggtcg atagccgagg tgacacgtcg
     1561 cgcaggtacc gatgctttca gcacctgccg tcacgatctc ggcgcggtga ttggtgccgt
     1621 ggcaggcgtc gcagcgcgtg cccgcgggca agagcgaatc ggcgctcgag cggctggtct
     1681 tggctttgtc gtggcaggtg gcgcacgtcg caccgagcgc gatgtgccgg gcatgatcga
     1741 agcgcaggcc gaggtgctgg gccgggtaaa tcaccgggct cggcgccgcg tcgccctgtg
     1801 cgcccggggg gcgccaagct tccggtacgg cgcgaccgcc gggcagcggc gcgagaccat
     1861 gcactggcgc ggaggcgacc ggcgcgggcg gcggcatcga agtgtctgcc cgcaccggcg
     1921 caaaccaagc gacgagcagg gaaagggcgc acgccgcgag cagcacgtaa aacccgagat
     1981 cgcgctgccg cttcatcgca gcaccgtaag ctcgagggtc gcgagcacgc gataacgctg
     2041 cccgacgagg cggttcatcg tgtgttccca ctcgagtccg aggcgggcgc ggtcgccgag
     2101 gccgcccggc ctgaggccgc cgccgagcac gtacgagaag ctcgtcgcgt aacggtcggc
     2161 gcggagctcg tccttgaagt cgtagagcga gagcacgacg agcccgtcgt agtagccgtt
     2221 cgcgaacgtc ttgcgcgtgg tcacgtcggc gccgacgcgg tggccgcgcg cgccgagctc
     2281 ggcttggcta cgcagcgaga ccgagccgtc gttgaagcga taacgaccga agagcagcgc
     2341 gaacggatcg agctcgcgcc gcacggcgct ttcgtccgag ctcgtcgcgt acgtcgccgg
     2401 atcaccgagc gtctggtact cgcgcgcgcc gaagttcagc gccgcgtcga gccggcgcga
     2461 aaaggtgtag acggtgcgcc ccgtgtagct cgtcatggcg gagtgcgcga accagttgaa
     2521 cacggagtcg gcgtcgaagg tcggcacgag gcgttcgtag tcggcgccga gcgtgaggcg
     2581 cgcgctcgca tacgcgtcga gcgcgacggc ttgttcactc acgagccccg cgtaaaagtc
     2641 gtagacgatg ctgcccgaga gcgcgccgaa cgacaccggc tgcagccgca gcgagccgcc
     2701 cacgcgctcc gtcgagatgc gatcctcggt gacggtgcgc agcacgccgt ccgcgggcaa
     2761 aaagggcgag accacgacgc tatcgcggtt ggtcacgcgc cgatacgtca cgcgcgcgtg
     2821 cagccaccat aaatccgagg tttcgagcgc aacgccgacg gcgggcgcca cggcggcttg
     2881 gttcaggtaa ctcgtccatt ggtcgctgcg gaggtcgtcg cgcgaaccgc gggcgacgcc
     2941 gtccgcctgg aagcgcggcg tcgtgagcag cggcaagccc gaacgctgct cgaggccgcc
     3001 gtatgcctcg agccgcaagt gcgcgggcgt ggcgagcgcg acctcggcgc cgtcgaacga
     3061 ccaccagccg agcacgtccg cgacgtactg gcggccgagc ttgaaaccga acccgccgcc
     3121 gaagtagcga tcgccttcga ggtaggcgta catgagatcg aacggcgctt gctcgaggcc
     3181 cggcacgaag cgggcggagc tcgggtcgcg ttcggccgga tcctgaccga ggtcggcgtc
     3241 caggcgcacg cgcgagcgga acgagagcac ggggccgcgg ggagcgcgct caccctgcaa
     3301 gtcgtagagc gcgatgccga gggtgttcgt gtaccggcgc cgccggagca gtggctcacc
     3361 ataggggctc tcgagcgagt agaactgcgt ggcgaccgag gcatcgacct cgctctcgta
     3421 cgcgctcgcg cgacgttctc cgaagcacca gacgacgcag gcgacgcagg ccgccgcgac
     3481 gggcaccgaa cgtcgcatgc cggcgagcat cgccggggga cacacggcgc gtcaatcggc
     3541 gcgtgccggg ccggcgccgt acgaccgccg tcaagccggc gtgccgaaca agagccggca
     3601 agtgaggcgc gtggcggcga cggtgccgat cggcaacagc gcgacggcgc agcacggcag
     3661 cgtgaaggcg agcgcaaaga cggcgccgaa ccccgcgacg cacgcgaaat gctcgtagag
     3721 gagcgcgagc cgggcgtaga acccgaagcc gcggagcgtg agcgggtagt cgaaaagact
     3781 ccaggcgacg aacaatgcgt aggcgatcgc gccgagcggc aacgtgacga ccgtcgccgg
     3841 cgggaacacg aacccgacga gccaaagcag cgcgtagagt ggcgccgcga cgcaaagcgc
     3901 gcctgcgacc gagcgcacgc cgcagccgag ctcgtgccaa aacccgagcg gcgcgcgcgg
     3961 aggagcgccg gcgcttcgct cgacg
//
LOCUS       DATIML010001299         2895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1142073, whole genome shotgun sequence.
ACCESSION   DATIML010001299 DATIML010000000
VERSION     DATIML010001299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1142073"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="VLJ38_22355"
     CDS             complement(<1..842)
                     /locus_tag="VLJ38_22355"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HSU42348.1"
                     /translation="MSRQLRAVALAALGIACASPGTSDQFAVTHASVVGGEPSPAGGI
                     EDAVLLLRIPLDGGELVCSSGLVAPNLAVTARHCVSHFVDGNFACTVHGELQSVDPNA
                     GVLGSHFDASTIEFYDGTTPRTKAIAHGAQVLSTLSDTVCTNDLAFVVLDRSLSLPVL
                     PLRLKGRARIGEPVTLVGYGFDDAMVGGDFLDVTTQRRTHNTSLVIDELGPVSNDDVT
                     STPPRTVVIEGPSGCVGDSGGPLLARDTHALLGVDSLSANGNCTSRTVSNLFTHVPDF
                     QLLLA"
     gene            complement(818..2755)
                     /locus_tag="VLJ38_22360"
     CDS             complement(818..2755)
                     /locus_tag="VLJ38_22360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42349.1"
                     /translation="MNRREGAARRSSLWRTRALLALPVAFASGCLLIAPPEDLPALGA
                     GAQGGHGGSAGVGGAELGGTSSSFSGAGGDHDSGGEGGRASGGSGAMGGKGAAGGNGA
                     VGGSEQGGGAPRGGNGTGANGGTTVGSAGEGGQDACSTNADCVRQNAGEAARCRPREH
                     TCVALKTPECPVAYAGDEGAARFADPNAIFVGSMVALDPDVPTTSPNAYALELAIDEI
                     NTKTGGLPDPDSGPPHPLVLLVCQSDTSEDADVVKRGIAHLGEDVQVQAVVAQLKPDD
                     LFDAFNTEKGRKLVYFNAVAISSSLALNNGKLIWTLLGQPKDYAAAYKLLLSDLETYV
                     RNARGLSSTDTIKVATVYTTDAFDEDLYGSVAPTLRFNDLPAESQPFDATHPDGKYLK
                     VPVGSSSVDVQGWVDQIVAFAPDIVISAAGDAMTTSDGTNSDGIIQRVEAAMPSPRPY
                     YILGPYNAGTRALVAVESVIEGEFTSDATVAGRFMGVSAAAAEDLTLQNGFADRFVPR
                     FSSSKEVAGQVDNYYDAVYYLAYATYAASLTGDTSGPGISAGMQRLIDGQRFDDGPND
                     IGRVFAALANKDANIALNSTLGAPNFDPITGVRPATPGIFCFTWDAGSQRARHSLDVL
                     RYDAESKVFTGTYDCLANFAP"
BASE COUNT          475 a          949 c          978 g          493 t
ORIGIN      
        1 gcaagcaaga gctggaagtc ggggacgtgc gtgaacagat tactgacggt gcgggaggtg
       61 cagttgccgt tggcggacag cgagtcgacg ccgagcaagg cgtgggtgtc gcgcgcgagg
      121 agcggcccgc cgctgtcgcc cacgcagccg gacggtcctt cgatgacgac ggtacgcggc
      181 ggcgtactcg tcacgtcgtc gttgctgacg ggcccgagct cgtcgatgac gaggctcgtg
      241 ttgtgggtgc ggcgctgcgt cgtcacgtcc aagaaatcgc cgcccaccat ggcgtcgtcg
      301 aagccgtagc cgacgagcgt caccggctcg ccgatgcgcg cgcgcccctt caaacggagc
      361 gggagcaccg gtaacgacaa cgagcgatcg agcacgacga aagcgagatc gttcgtgcac
      421 accgtgtccg agagcgtcga gagcacctgg gctccgtgag cgatcgcctt cgtgcgcggc
      481 gtggtgccgt cgtaaaattc gatggtcgaa gcgtcgaaat gcgacccgag tacgcccgcg
      541 ttcgggtcga cgctctggag ctcgccgtgc accgtgcagg cgaagttgcc gtccacgaag
      601 tgcgacacgc agtggcgcgc cgtgacggcg aggttcggcg cgacgaggcc cgagctacag
      661 acgagctcgc cgccgtcgag cgggatgcgg agcaagagta cggcgtcttc gattccgccc
      721 gcgggcgacg gttcgccgcc gaccacggag gcgtgcgtga cggcgaattg atcgctggtg
      781 ccgggactcg cgcacgcgat cccgagcgcg gcaagcgcta cggcgcgaag ttggcgagac
      841 aatcgtaagt ccccgtgaat accttgctct ccgcgtcgta tcggagcacg tcgagcgagt
      901 gccgagcacg ctgagagccg gcgtcccagg tgaagcagaa gatgcccggc gtggcggggc
      961 gaacgccggt gattgggtcg aaattgggcg cgccgagcgt gctgttaagc gcgatattgg
     1021 cgtccttatt tgcgagcgcg gcgaaaacgc gcccgatatc gttggggccg tcgtcgaagc
     1081 gttggccgtc gatcagccgc tgcatgccag ccgagatgcc ggggcccgac gtgtctccgg
     1141 tgagcgatgc ggcgtacgtc gcgtacgcga ggtagtagac agcgtcgtaa tagttgtcga
     1201 cttgtccggc gacttctttg gaggacgaga aacgcgggac gaagcggtca gcgaagccgt
     1261 tctgaagcgt tagatcctcc gcggcggcgg cgctgacgcc catgaagcgg cccgccacgg
     1321 ttgcgtcgct cgtgaattct ccctcgatga cgctctcgac ggcgacaagg gcgcgcgttc
     1381 ccgcgttgta cggtccgaga atgtaatacg gtcgcggcga gggcattgcc gcttcgaccc
     1441 tttgaatgat gccgtcggaa ttggttccgt ccgaggtcgt catcgcgtcg cccgctgcgg
     1501 aaatcacgat gtccggggcg aacgccacga tctggtcgac ccagccttgg acatcgacac
     1561 tcgacgagcc gaccggcact ttcaggtact ttccgtccgg atgggtcgcg tcgaagggct
     1621 gactctcggc ggggaggtcg ttgaagcgga gcgttggagc taccgagccg tagagatctt
     1681 cgtcgaaggc atcggtcgtg tagaccgtgg cgactttgat tgtatcagtc gacgaaagtc
     1741 cgcgcgcgtt cctcacgtag gtctcgagat cgctcagcag cagcttgtac gcggccgcat
     1801 aatccttcgg ttgcccaagc aacgtccaaa tcagcttccc gttgttcagc gcgaggctcg
     1861 aggagatcgc cactgcattg aagtaaacga gcttgcggcc tttctccgtg ttgaaggcat
     1921 cgaacagatc gtccggcttc aactgagcca cgacggcttg cacttgcacg tcttcgccca
     1981 aatgcgcgat gccgcgcttg accacgtccg cgtcttcgga cgtatcgctc tggcaaacga
     2041 gtaggacgag cgggtgcggc gggccactgt cgggatccgg caagccgccg gttttcgtgt
     2101 tgatctcgtc gatcgcgagc tcgagtgcgt aagcattcgg gctggtggta ggtacgtcgg
     2161 gatcgagcgc gaccatggaa ccgacgaaaa tcgcgttcgg atccgcgaag cgagcggcgc
     2221 cttcgtcacc ggcatacgcg acggggcact cgggagtctt gagggccacg cacgtatgct
     2281 cccttggacg acagcgcgct gcttcacccg cattctgccg aacacagtcg gcgttggtac
     2341 tgcacgcatc ctggccgccc tcgcccgcgc tgcccacggt ggtgccgccg ttagcacccg
     2401 tgccgttacc acctcgcgga gcgccgcccc cttgctcgct gccaccgacc gcaccgttgc
     2461 cgcccgccgc gcccttaccg cccatggcgc cactgccacc gctcgcacgc ccgccttcgc
     2521 cgcccgagtc atggtcgccg ccggctcccg aaaaggagga tgacgtgccc ccgagctcgg
     2581 cgccgcccac gcccgcgctt ccgccgtgtc cgccctgcgc gcctgctccg agcgcgggca
     2641 aatcctcggg cggcgcgatg agcagacacc cgctcgcgaa cgccacgggc agcgcgagca
     2701 gcgcgcgcgt gcgccatagc gagctgcggc gtgcggctcc ttcacgcctg ttcacagtcg
     2761 tccctccgcg acgatgccgc cgcccgtcgc attcgcccaa cccgaccacg tgatgcgcgg
     2821 cgtcgcactc gcgcgcggca aagtcgcgcg ctttgccgct ccgggcggcg cactcccacc
     2881 gttcgcgtgc tccgc
//
LOCUS       DATIML010001300         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3450669, whole genome shotgun sequence.
ACCESSION   DATIML010001300 DATIML010000000
VERSION     DATIML010001300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3450669"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..625)
                     /locus_tag="VLJ38_22365"
     CDS             complement(128..625)
                     /locus_tag="VLJ38_22365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42350.1"
                     /translation="MVPINEGKKGLVIVDNRYGPLIVSTFVGEVELSQGLWYERTILD
                     VIGREAAGGRRVVSIHDASRVTKTSAEMRRFWADLSARHSATLESRTLANVIVVSSPL
                     MRGVLTAVGWMNPKVAALKLFPTLDTAVAEAQKLLRAAGTPVTIPAGGYRLPEQGSIA
                     PGAPR"
     gene            820..1986
                     /locus_tag="VLJ38_22370"
     CDS             820..1986
                     /locus_tag="VLJ38_22370"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSU42351.1"
                     /translation="MRLDGPVLIIGAGIGGLTLASALAQRGFECRLFERAPELAAAGA
                     GILVQTSALLALRTLKLDAAVAANGQDVRVGFLKTDRGQTLQRTSMSFLQDELGVSTV
                     AIHRARLQRLLLEAGNAAELELGAELTGYETEESGVTALFAGGRRERGALLVGADGLH
                     SAVRRALLGESPLRYAGYTSWRGIAEVSGATPAHEVTEMWGPGARFGFADISRSETYW
                     FAVLNAREGERESNSLEAVTRQFAGWAEPVPKLLAHTRPERVFRTDIHDRLPVASWSR
                     GRVTLLGDAAHPTTPNLGQGGSMAIEDAVVLAHALERAPALADALADYERRRVARANR
                     IVAASFRFGKLAQTQNRLAIFLRNALFRAMPEGIVQRELRRASAFSLEDGLVRA"
     gene            2187..>2483
                     /locus_tag="VLJ38_22375"
     CDS             2187..>2483
                     /locus_tag="VLJ38_22375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42352.1"
                     /translation="MPGAGASGKAGAGTSNTGGSGGATGASDGGSGGDAVTAGAGGAN
                     AGRGGAAGTGASGGSGGESVEPAGAGGEAGSAASCTTLTTTKKHALRARSAGFSG"
BASE COUNT          401 a          812 c          876 g          394 t
ORIGIN      
        1 cggcaatctc ggtttcatcg acgcgcggtc agaactgctc ggcgtgaaag cgtaagtcga
       61 ggtcgctgca cacgcgcgcc acgacgcggc ggaggccggg cggaccgcaa aagaagacgt
      121 ccacgggtca gcgcggcgcg ccgggcgcga tgctgccctg ttccggcagc cgatagccgc
      181 ctgccggtat cgtcaccggt gttccggctg cccgcaagag cttctgcgct tcggcgaccg
      241 cggtgtcgag cgtaggaaaa agtttgagcg ccgcgacttt cggattcatc cacccgacgg
      301 ccgtgagcac gccgcgcatg agcgggctcg agaccacgat cacgtttgcg agtgttctcg
      361 actcgagcgt cgccgagtgg cgagcgctca aatcggccca gaaacggcgc atttctgcgc
      421 tggttttcgt cacgcggctc gcgtcgtgaa tgctgacgac ccgccggcct cccgccgcct
      481 ctcgtccgat gacgtccaaa atcgtccgtt cgtaccaaag gccctggctg agctccactt
      541 cgccgacgaa cgtcgaaacg atgagtggtc cgtaccgatt gtcgacgatg acgagcccct
      601 ttttgccctc attgattggg accatcactg cgcgaggcta caccgcagcg cagctgcggt
      661 gatggaacaa gaagcagccg tagccaatcg tgcgccgaaa tagcggaatt tctcggcctt
      721 cacacttgca ggcggagaag tcggcgatcg acgcaagcgg tctcgggtgt ctgatcttgc
      781 gggggccgcc cggccgagct gcgctaatct gcgcgccgca tgcgactcga cggtcccgtt
      841 ctcatcatcg gtgctggtat cggcgggctc acgctcgcga gcgcgctcgc tcagcgcggg
      901 ttcgaatgcc gcttgttcga gcgcgcgccc gagctggcag cggccggtgc cggcatcctc
      961 gtgcaaacga gcgctctgct cgccctgcgc acgctgaagc tcgatgcggc ggtcgccgcc
     1021 aacggacaag acgtgcgggt gggttttctg aagacggacc gcgggcaaac gctccagcgc
     1081 acgtccatga gcttcctgca ggacgagctc ggtgtttcga ccgtcgcgat ccatcgtgcg
     1141 cggttgcaac ggttattgct cgaggcaggc aatgcggcag agctcgagct cggcgccgag
     1201 ctcacggggt acgagacgga ggaaagcggc gtgacggcgc tcttcgccgg cggcaggcgc
     1261 gagcggggcg cgctgctcgt cggcgcagac ggcctgcatt cggccgtgcg tcgcgcattg
     1321 ctcggcgaaa gcccgctgcg ctacgccggc tacacgagct ggcgcggtat cgccgaggtc
     1381 agcggggcca cgcccgcgca cgaagtgacc gagatgtggg gccccggcgc gcgcttcggc
     1441 ttcgccgaca tcagccggag cgagacgtac tggtttgccg tgttgaacgc acgcgagggc
     1501 gagcgtgaat cgaattcgct cgaggccgtg acgcggcagt tcgctggctg ggccgagccc
     1561 gtgcccaagc tgctcgcgca cacccgcccc gaacgcgtgt tccgcaccga tatccacgat
     1621 cgtctccccg tcgcgagctg gtcgcgcggg cgcgtcacgt tgctcggcga tgccgctcat
     1681 ccgacgacac cgaacctcgg ccaaggcggc tccatggcca tcgaggacgc cgtcgtgctc
     1741 gcccacgccc tcgagcgggc tcctgcgctc gccgacgcgc tcgccgacta cgaacgacgt
     1801 cgcgtcgcgc gcgccaatcg catcgtcgcg gcgtcgtttc gcttcggcaa gctcgcgcaa
     1861 acccagaatc gactcgccat ttttcttagg aacgcactct tccgtgcgat gcccgagggt
     1921 atcgttcaaa gagagctccg gcgcgcgtcc gccttctcgc tcgaggacgg actcgtgcgc
     1981 gcctgacccg ccgcgcgagg taggggcgag ctccgacgct ttacattgcg cgcaaattac
     2041 ataaactccg ccgggtgagg gcagctatga ttttcggaag gtggacgagc tttgtcgcgt
     2101 tgggctgggc ggtggcgtgc aacggctcca cgagcgacga gccggataca cgtccagctg
     2161 ggggcaaggg cggagtaggc ggtagcttgc ccggcgcggg cgcgagcggc aaagccggtg
     2221 ccggaacgag caacacgggg ggaagcggcg gtgcgaccgg cgccagcgac ggaggtagcg
     2281 gcggagacgc cgtcacagcg ggcgcgggcg gagcgaatgc tgggcgtggc ggcgcggctg
     2341 gaaccggcgc cagcggcggg agtggcggtg agagcgtcga acctgccggt gcgggtggcg
     2401 aggccgggag cgcagcgtcg tgcacgacgc tgacgacgac gaagaagcac gccctgcgcg
     2461 cgcggagcgc cggattttcc ggg
//
LOCUS       DATIML010001301         2264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2013515, whole genome shotgun sequence.
ACCESSION   DATIML010001301 DATIML010000000
VERSION     DATIML010001301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2013515"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VLJ38_22380"
     CDS             <1..391
                     /locus_tag="VLJ38_22380"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HSU42353.1"
                     /translation="VDLLRSSFALVVEREPEVTHRFYDVLFAKYPQVQPLFGRRSRAD
                     QERMLRDMLVAIVDHVEDPAWLQNQLAALGSKHVGYGVTAEMYGWIGDALLTTLKEVA
                     GEAWTPAIADTWTQAYGAVAGLMQAQP"
     gene            407..976
                     /locus_tag="VLJ38_22385"
     CDS             407..976
                     /locus_tag="VLJ38_22385"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HSU42354.1"
                     /translation="MLTESDRKAVRQSFRLVVPIADTAADLFYRRLFELRPTYRELFK
                     DDIAAQKRKLLRMLAFIVRALDYKDTEWRDDVPPEQDLMLVVLALGRRHADLYRIPNE
                     SYAVVGEALLWTLDYGLGEAFTQDVRAAWTRLYTLLAQTMRLGSTAIDREAALRGAPQ
                     AQLEGEEALLGQLAEAGIDEVRLGVEEPS"
     gene            973..>2264
                     /locus_tag="VLJ38_22390"
     CDS             973..>2264
                     /locus_tag="VLJ38_22390"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU42355.1"
                     /translation="MKVGIMQGSLREFDLAQVLQVVGLGRQYTGVELSLGGGRTGTIF
                     VKSGQVVSASEGEQQGRDAFRDLFRSNEGDFFVFRQDTPPELPEPLGTLDVLLLDALT
                     ERSNAFFERPSSPVNEQATHPGVAPPHYSAPLPPLRAPNVAVTPEPEAPPARVNVAPL
                     PAPVAAAPVHVAPAPAAPVHVAPVAAAPVQVAPAAPVPAPSVPPRKAAPATFGSRPPA
                     FAAAAGDGKIVAFASPKGGSGKSTISLNTALSLARRGHSVILVDGDVNGDVLSAIDAR
                     GRARAGALDVVSGSARIEDALMDTVLTRFKLMPAVGPKLPDLDALSVDANGRWSALLG
                     DLANRADVVVVDTPAGMFGVTRAILRASTHVVGVLQAEVLAARSFTRFAEGLATIPEE
                     QRPAVIGVVLNMLQTRHHASLGVFQDALADLPSAWLFDT"
BASE COUNT          352 a          872 c          705 g          335 t
ORIGIN      
        1 tgtcgacctc ttgagatcga gtttcgcatt ggtcgtcgaa cgcgaaccgg aagtgacgca
       61 ccgtttctac gacgtgctct tcgccaagta cccgcaagtg cagccgctgt tcggccggcg
      121 cagtcgcgcc gaccaagaac gcatgctgcg cgacatgctc gtcgccatcg tcgatcacgt
      181 cgaggacccc gcctggctgc aaaaccagct cgccgcgctc ggctcgaaac acgtcgggta
      241 cggcgtcacg gcggaaatgt acggctggat cggcgacgcc ttgctcacga cgctaaagga
      301 agtcgcgggc gaagcctgga cgccggcgat cgcggacacc tggacccaag cctacggcgc
      361 cgtcgccggg ctcatgcaag cccaaccctg aaacccggag gcaagcgtgc tcaccgaatc
      421 cgatcgcaaa gccgttcgtc agagcttccg cttggtcgtg ccgatcgcgg acaccgcggc
      481 cgacctcttt taccgccgcc tgttcgagct caggcccacg tatcgcgagc tcttcaaaga
      541 cgacatcgca gcccagaaac gcaagctcct gcgcatgctg gcgttcatcg tgcgcgcgct
      601 cgactacaaa gacaccgagt ggcgcgacga cgtgcccccg gagcaagacc tcatgctcgt
      661 cgtgctcgcg ctcggccggc gccacgccga cctctatcgc atcccgaacg agtcgtacgc
      721 ggtcgtcggc gaagcgctgc tctggaccct cgactacggc ctcggggaag cgttcacgca
      781 ggacgtgcgc gccgcctgga cgcggcttta cacgctgctc gcccaaacca tgcgcctcgg
      841 ctcgaccgcg atcgatcgcg aagccgcgct ccgcggagcg ccgcaggccc agctcgaggg
      901 cgaggaagcg ctgctcggac agcttgccga agccggcatc gacgaggtgc ggctcggtgt
      961 ggaggaaccg tcatgaaggt cggcatcatg cagggcagcc tgcgcgagtt cgatctcgcg
     1021 caggtgcttc aggtcgtcgg tctcgggcgg cagtacacgg gcgtcgagct ctcgctcggc
     1081 gggggacgca cgggcaccat cttcgtgaag agcgggcagg tcgtgagcgc gagtgaaggc
     1141 gagcagcaag ggcgcgacgc ttttcgcgat ctcttccgct cgaacgaagg tgattttttc
     1201 gtgttccgcc aggacacgcc gcccgagctg cccgagccgc tcggcacgct cgacgtgctc
     1261 ctgctcgacg cgttgaccga gcgctcgaac gcgtttttcg agcgcccgag ctcgcccgtg
     1321 aacgaacagg cgacgcaccc gggcgtcgcg ccgccgcact actctgcccc gctgccgccg
     1381 ctgcgcgcgc cgaacgtcgc cgtcacgccg gagcctgaag cgcccccagc gcgcgtcaac
     1441 gtcgcgccgc ttcccgcgcc ggttgcggca gcgcccgtcc acgtcgcgcc ggcgccggca
     1501 gcgcccgtcc acgtcgcgcc agttgcggca gcgcccgtcc aggtcgcgcc cgccgcaccc
     1561 gtcccggcac cgtcggtgcc gccgcgcaaa gccgcgcccg ccacgttcgg cagccgcccg
     1621 cccgccttcg cagccgcggc cggcgacggc aaaatcgtcg ccttcgcgag cccgaaaggc
     1681 ggctccggca agagcaccat ctcgctcaac acggcgctca gcctcgcgcg ccgcggccac
     1741 tccgtcatcc tcgtcgacgg cgacgtgaac ggcgacgtcc tctctgcgat cgacgcgcgc
     1801 ggccgtgctc gagcgggcgc cctcgacgtc gtgagcggca gcgcccgcat cgaagacgcg
     1861 ctgatggaca ccgtcctcac gcgtttcaaa ctgatgcccg ccgtcggccc gaagctcccg
     1921 gacctcgacg ccctcagcgt cgacgccaac ggccgctggt ccgcgctcct cggcgacttg
     1981 gcgaaccgcg ccgacgtcgt cgtcgtcgac acccccgccg gcatgttcgg cgtcacgcgc
     2041 gccatcctgc gcgcctccac gcacgtggtc ggcgtcctcc aagccgaagt cctcgcggcg
     2101 cgctccttca cgcgcttcgc cgaaggcctc gccaccatcc ccgaagagca gcgccccgcc
     2161 gtcatcggcg tcgtcctcaa catgctccaa acccgccacc acgcctccct tggcgtcttc
     2221 caagacgccc tcgccgatct ccccagcgcg tggctcttcg acac
//
LOCUS       DATIML010001302         1922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5478884, whole genome shotgun sequence.
ACCESSION   DATIML010001302 DATIML010000000
VERSION     DATIML010001302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5478884"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..604
                     /locus_tag="VLJ38_22395"
     CDS             134..604
                     /locus_tag="VLJ38_22395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSU42356.1"
                     /translation="MENQSDVIELNAKGSEKHTGGCHCGAVRFEAELPAGFGGSRCNC
                     SICQKLGAVGCILKPAAFRLLSGEASLGRYQWGMRISTRHFCTQCGVYCFGAGHLAQI
                     GGDFVSLNLNCLDDFDVNTLELVHWDGRHDNWMAGPRSTPWPVVTDGDRAAASA"
     gene            631..912
                     /locus_tag="VLJ38_22400"
     CDS             631..912
                     /locus_tag="VLJ38_22400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42357.1"
                     /translation="MYTEPIPETELAARGSELIESEPLELWASELLEAGLIALIEAEL
                     SHSVSTALLAAELMDAGWTALGTGERRGAELAALKAPDACRPSRAPRRA"
     gene            complement(863..1519)
                     /locus_tag="VLJ38_22405"
     CDS             complement(863..1519)
                     /locus_tag="VLJ38_22405"
                     /inference="COORDINATES: protein motif:HMM:NF019884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HSU42358.1"
                     /translation="MQRTERLFALAEYLRGRRTGVTAEALAERFEVTVRTIYRDLDAL
                     RAAAMPVAAERGRGGGYALDRSYSLPPVNFTAREAALLIALGRFAIDMRLMPFNDTLE
                     CALDKVRAALSTSAQRDLLVRLEELAFFGVPALPCKRSVRSAIERAWFEQQPLAITYV
                     DGNSVESRRRIRIRGVHMDRHETRLDALDLEINERRPFRLDRITRAEVLETVGTRPEL
                     "
     gene            complement(1630..>1922)
                     /locus_tag="VLJ38_22410"
     CDS             complement(1630..>1922)
                     /locus_tag="VLJ38_22410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HSU42359.1"
                     /translation="AIQTGLGSESKNIRAITDRIAPNVQHLIHDGKADVREAVRANVR
                     ASVHHLRHGSQILEELVLAGRVAVVGAEYDLESGAVDFFDGVPDDVKRPDAP"
BASE COUNT          327 a          642 c          650 g          303 t
ORIGIN      
        1 ttctgacggc tactcacggc ggccggtccc ccccccgagc cgccgtcgac aaacctgaca
       61 gaaggctgtc atcgctcccc cctaggctcc tcttcatcga acggcgacgt tcggtcgtcg
      121 agaggagtca gacatggaaa atcagagcga tgtcattgag ttgaacgcga agggcagcga
      181 gaagcacacg ggcggctgcc attgcggtgc ggttcgcttc gaggccgaac tgccggccgg
      241 attcggcggt agtcgctgca actgcagcat ctgccaaaag ctcggcgcgg tcggctgcat
      301 cctcaagccg gcggcgttcc gcttgctctc gggagaggcg agcctcggac gctatcagtg
      361 gggcatgcgc atctcgacgc gtcacttctg cacgcagtgc ggcgtctact gcttcggcgc
      421 gggacacctc gcgcaaatcg gcggcgattt cgtctcgctg aacctcaact gcctcgacga
      481 cttcgacgtg aacacgctcg agctcgtcca ctgggacggt cgccacgaca actggatggc
      541 cggaccgcgc tcgacgccct ggcccgtcgt gacggacggc gaccgcgccg ctgccagcgc
      601 gtaggcccac tgccgcgaac ttttccgaca atgtacaccg aaccgatccc ggagaccgag
      661 ctcgctgcac gcggcagcga gctcatcgaa tccgaaccgc tcgagctttg ggcgagcgag
      721 ctcttggaag ctggcttgat cgcgctgatc gaagccgagc tcagtcactc ggtctcgacg
      781 gcgttgctcg ccgccgagct gatggacgcc ggttggacgg cgctcggcac aggcgagcgc
      841 cgcggggccg agctcgccgc gctcaaagct ccggacgcgt gccgaccgtc tcgagcacct
      901 cggcgcgcgt gatgcgatcg agccgaaacg gccggcgttc gttgatttcg aggtcgagcg
      961 cgtcgaggcg cgtctcgtga cgatccatgt gcacgccgcg gatccgaatg cggcgccggc
     1021 tttcgacgga gttgccgtcg acgtacgtga tggcgagcgg ctgctgctcg aaccaagcgc
     1081 gttcgatggc ggagcgcaca ctgcgcttgc agggcagcgc cggcacgccg aaaaacgcga
     1141 gctcctcgag ccgcacgagc agatcacgtt gcgcggacgt cgagagcgcg gcgcgcacct
     1201 tgtcgagcgc gcactcgagc gtgtcgttga aaggcatcaa gcgcatgtcg atggcgaagc
     1261 ggccgagcgc gatgagcaac gccgcttcgc gagcggtgaa attgacgggc ggcaggctat
     1321 agctgcgatc gagcgcgtag cctccgcccc ggccgcgctc cgccgcgacg ggcatcgcgg
     1381 ccgcacgcag cgcgtcgagg tcgcggtaga tcgtgcgcac cgtgacctcg aagcgttcgg
     1441 cgagcgcctc cgccgtcacg ccggtgcgcc gtccgcgcaa gtactccgcc agggcaaaca
     1501 gccgctcggt gcgctgcatg ccgaaaacct gacattaacc tgacagcgcg tcgactcact
     1561 cggtgtgccg cggcggacga accgaaaaat gcggcgagct cgagctccgc tggcgcgagc
     1621 cgcgacagct cacggtgcgt caggtcgctt cacgtcgtcg ggcacgccgt cgaaaaagtc
     1681 gacggcgccg gactcgagat catactcggc gccgacgacg gccacacgcc ctgcgagcac
     1741 gagctcctcg aggatctggc tgccgtgacg caggtgatga acggacgcac gcacgttggc
     1801 acgcaccgcc tcgcgcacgt cggctttacc gtcgtggatg aggtgctgga cgttcggcgc
     1861 gatgcgatcg gtgatggcgc ggatgttctt cgactcggag ccgagcccgg tttggatggc
     1921 ct
//
LOCUS       DATIML010001303         4693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4898595, whole genome shotgun sequence.
ACCESSION   DATIML010001303 DATIML010000000
VERSION     DATIML010001303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4693
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4898595"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..1403
                     /locus_tag="VLJ38_22415"
     CDS             129..1403
                     /locus_tag="VLJ38_22415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSU42360.1"
                     /translation="MRAARRSWSLACACVGLALGLLGCDALRSGAHPDVPPFVTRPDG
                     SMHVVYERTVLAASRRVGEPYERGQPEIDPAGMRVFVGSSDRGLYAVRADDGTVLWRF
                     ETLGFVQCAPLYDPGEDALYFGSNDGALYKVRAKNGQLLWRFMTNAEVSRRPVLANGT
                     LFVANANDTVLALDPKSGELRWHQHRTPAMGMEVAGYSGVTFFRDKIYSGFSDGTVVA
                     FDPATGAERWQPVDLAAEVEAQTGEAPRYLDVDTTPVADTLQTGPVVFVASYAGGVYA
                     LDAETGSQVWSNTGVLGVSELVLWTQDARTNPPTPARHLLLASSGTSGLWGLDPETGA
                     EVWRRSLPSGGVSAPVAISGALMVSTTRLGIFLLSPLGGDLIDGIHLADGSAMTPAAE
                     GTRAFVLTNAGTLLALRVAPPLAHFEPNRTPL"
     gene            1549..2310
                     /locus_tag="VLJ38_22420"
     CDS             1549..2310
                     /locus_tag="VLJ38_22420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42361.1"
                     /translation="MDKSGSGGGEEQPARAGDAPNAFGPLLAELQDINQRRGLERTLA
                     VGELILREFFGGDPRAWREQSRKKANSIRRLALRPDCPFRKSTLNEAVGVYVAVFEQP
                     SLRTAAHVTASHIASVLRLPAEERERLLEEAERERWSVRQLRSRVRSRGRSGAGESRL
                     AWLDAGMRAVLLLQRSLEDAVAIAGHMGELGPLSSHSRGELRELANEVLHLGTQLSSL
                     AAEPSDTTRLRPSEIRYREGQEPVVASSEAAPSSR"
     gene            2463..3431
                     /locus_tag="VLJ38_22425"
     CDS             2463..3431
                     /locus_tag="VLJ38_22425"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSU42362.1"
                     /translation="MADEQPDAARDRPEPQAANVEDCEVEVGHDPALPGIITLPRGAH
                     AAPAVVLVHGSGPSDRDERVGKTRVFGDLARGLGARGIVVLRYDKRTRVEPRGIVTVK
                     EEFIDGALAAVQLLRGFPEVDPRRVFVLGHSQGGALAPRIAKADGRLAGIVVLAGPTR
                     PIEDSWVEQLTYFAALDPNNAALRERLEEVKAFRALVQSPSLAADTELHIPGDGPITG
                     AYFLDLRGYHPEEVAAELACPLLVLQGARDYQVSVTDDFPRWQHALAGNPRATLRSYP
                     KLDHRFVAGEGPSTPAQYERGGHVAPEVSADIASWILQQAPPRSLR"
     gene            complement(3456..4604)
                     /locus_tag="VLJ38_22430"
     CDS             complement(3456..4604)
                     /locus_tag="VLJ38_22430"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020732544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HSU42363.1"
                     /translation="MSRSLVRLKKDLARSIRRGHPWVYRDALAPAPELEDGAVVEVCG
                     KDGRFLAVGFWDGRSPIAVRVLATEREFEPGRGIAERLAAAATLRLLRLDLEQTNAFR
                     WVHGEADRLPGVHVDVYGDVASVRFDGSGARAFYGDLAALLRAEPRVGVKRVIDREMR
                     SGAEEPLEVRENGLIFVVDLAHGQKGGLFLDQRENRAEVGKRARGRRVLNLFGYTGGF
                     SLYAAAGGATRTDTVDQARPAIAAARHNFERNGFSVAEDRAGFHAVDAFDFLERARRD
                     GVRYDLVISDPPSFAKNRAGLPLALKAYRRLHTLAASVVAPGGLLFAASCSSQVGRAE
                     FVASVEAGARAAGRHFTLEAVRGAAFDHPVVPAFPEGEYLKLAIGVVS"
BASE COUNT          738 a         1623 c         1591 g          741 t
ORIGIN      
        1 caggccgggg tgtcggaagc gaacggtaag atgcaactct cgaaagagaa gctcgacgag
       61 ctcttgcgac agctcaagga gcacccgccc gcacccgcgc cgtccggcgc cccggcgggc
      121 aagccgtgat gcgcgccgcg cgccgctcgt ggtcgctcgc gtgcgcgtgc gtcggtctcg
      181 cgctcgggct cctgggctgc gacgcgctgc gctccggcgc gcacccggat gtgccgccct
      241 tcgtgacgcg accggacggc tcgatgcacg tcgtttacga gcgcacggtg ctcgccgcgt
      301 cgcgccgcgt gggcgaaccc tacgagcgcg gccagcccga gatcgatccc gccggcatgc
      361 gcgtcttcgt cggctcgagt gaccgcgggc tctacgccgt gcgggccgac gacggcaccg
      421 tgctctggcg tttcgagacg ctcggcttcg ttcaatgcgc tccgctctac gatccgggtg
      481 aggacgccct ctatttcggc tcgaacgacg gcgcgctcta caaggtgcgc gccaaaaacg
      541 gccaactcct gtggcgtttc atgacgaacg ccgaggtcag ccgccggccc gtgctcgcga
      601 acggcacttt gttcgtcgcc aacgcgaacg acaccgtgct ggccctcgat ccgaagagcg
      661 gtgaactccg ctggcaccag caccgcaccc ccgcgatggg catggaggtc gcgggctact
      721 cgggcgtgac gttctttcgc gacaagatct actcggggtt cagcgacggg accgtcgtcg
      781 ccttcgatcc cgccacgggt gccgaacgct ggcagcccgt ggatctggcc gccgaggtcg
      841 aggctcaaac cggggaggcg ccgcgctatc tcgacgtcga cacgacgccg gttgcggaca
      901 cgctgcaaac gggtccggtg gtgttcgtcg cgagctacgc gggcggcgtc tacgcgctcg
      961 acgcggaaac ggggtcgcaa gtttggtcga acacgggggt cctcggcgtc tccgagctcg
     1021 tgctgtggac gcaggacgcg cgcacgaacc cgccgacacc cgcgcgacac ctcttgctcg
     1081 cttcgagtgg cacgagcggg ctttggggcc tcgatcccga aaccggcgcc gaggtttggc
     1141 gtcgctcgct gccgagcggt ggggtctccg ctccggtcgc gatctcgggc gcactcatgg
     1201 tgtcgaccac tcgtctcggc attttcctgc tttcgccact cggcggtgac ctcatcgacg
     1261 gtatccatct ggcggatggc tcggcgatga cgccggctgc cgagggcact cgcgcgttcg
     1321 tgctcacgaa tgctgggacc ttgctcgcgc tgagggtcgc gccgccgctc gcgcatttcg
     1381 agccgaatcg cacgccactc tgacggaaac gttagcgcgg cgataccgta cggccgaacg
     1441 ccgaaacggc gccttgcgtc gcgactcgaa attgatagag tgggggtcgc gccggggcaa
     1501 tgactcgagg gtcgttttcc ggccacgttg gcgggttggg tggccagcat ggataaatcc
     1561 ggatcaggtg gtggcgaaga gcagccggct cgtgcggggg acgcaccgaa cgctttcggt
     1621 ccgctcttgg ccgagctgca agacatcaat cagcgccggg gactcgagcg cacgcttgca
     1681 gtaggcgagc tcattctgcg cgagttcttt gggggcgatc cgcgggcctg gcgcgaacag
     1741 agccgcaaga aggcgaattc gattcgccgc ttggcgctcc ggcccgactg tccgttccgg
     1801 aaatccacgc tgaacgaagc ggtcggggtt tacgtcgcgg tgttcgaaca gccgagtttg
     1861 cgtaccgcgg ctcacgtcac ggcgagccac attgcttccg tgctgcgttt gccggccgaa
     1921 gagcgcgagc gcttgctcga ggaggcggag cgcgaacgct ggagcgtacg gcagctgcgc
     1981 tcgcgagttc ggtcgcgcgg tcggtcaggc gcaggtgagt cgcgcctggc gtggctcgac
     2041 gcaggcatgc gcgcggtctt gctgttgcag cgctcgctcg aggacgccgt ggcgatcgcc
     2101 ggacacatgg gcgagcttgg tccgttgagc tcgcattcac gcggggaact acgcgagctc
     2161 gcgaacgagg tgctccatct cggcactcaa ctctcgagcc tcgccgcgga accgtccgac
     2221 acgacgcgcc tgcgtccgtc ggagatccgc taccgtgaag gccaagagcc ggtcgtcgcg
     2281 agctctgaag cggcaccgag cagtcgctga gcggcatgcg caagtcccga aacgcgggca
     2341 agcggctcgg agcggcggtc gcggcgttcg cttgcgcctg cgcatcggcc tcgctcgagc
     2401 cccagtccgc gccacctgtg cccgtcgcgc ctgcgcccca cgcctgcgga agcgcgcgtg
     2461 tcgtggcgga cgaacagccc gacgccgccc gcgaccgacc cgagccgcag gccgcgaacg
     2521 tcgaggactg cgaggtcgag gtcggccatg acccagcgct gcccgggatc attacgttgc
     2581 cgcgcggcgc gcatgccgcc cccgccgtcg tcctcgtgca cggctcgggc ccctccgatc
     2641 gcgacgagcg cgtcggaaag acgcgcgtgt ttggcgacct ggcgcgtggc ctcggggcgc
     2701 gtggcatcgt cgtcctgcgc tacgacaagc gcactcgcgt cgagccgcgc ggcatcgtca
     2761 cggtgaagga agaattcatc gacggcgcgc tcgccgcggt ccagctcttg cgcggcttcc
     2821 ccgaggtcga cccgaggcgc gtgttcgtgc tcggccacag ccagggtggg gcgctcgcgc
     2881 cccgtatcgc gaaggccgat ggcaggctcg ccggcatcgt cgtgctcgcc gggcccacgc
     2941 gaccgatcga ggattcctgg gtggaacaac tcacgtattt cgccgccctc gacccgaaca
     3001 acgcggcgct ccgcgagcgc ctcgaggagg tcaaggcgtt tcgcgctctg gtccagagcc
     3061 catcgctcgc ggccgatacc gagctccaca tcccgggcga cggcccgatc accggcgcgt
     3121 atttcttgga cctccgcggc taccaccctg aagaagtcgc ggccgagctc gcgtgcccgc
     3181 tcttggtttt gcagggtgcg cgcgattacc aagtctcggt aacggacgat ttcccacgct
     3241 ggcagcatgc gctcgccggc aacccgcgcg cgacgctccg cagctacccg aagctcgacc
     3301 atcgtttcgt cgcgggcgag gggccttcga cgcccgcaca atacgagcga ggtggccacg
     3361 tcgcgcccga ggtcagcgcg gacatcgcga gttggatcct gcagcaggcg ccccctcgct
     3421 cgcttcgata agtgcttcga atttcagccg cgcgctcagc ttacgacgcc gatcgcgagc
     3481 ttcaagtatt cgccttcggg aaacgccggc acgaccgggt gatcgaacgc cgcaccacgg
     3541 acggcctcga gcgtgaagtg ccggcctgcg gcgcgagcgc cggcttcgac gctcgcgacg
     3601 aactccgcgc gcccgacctg actcgagcac gacgccgcga acaggagccc gcccggcgcg
     3661 accacggagg ccgcgagcgt gtgcaggcgg cggtacgctt tgagcgcaag cgggagaccc
     3721 gcgcgattct tcgcgaaact aggaggatcg gaaatcacga ggtcgtaacg cacgccgtct
     3781 cgccgcgccc gttccaagaa atcgaaggcg tccacggcgt gaaagcccgc gcgatcctcg
     3841 gcgaccgaga agccgttgcg ctcgaaattg tggcgtgcag cggcgatggc gggacgcgcc
     3901 tgatcgaccg tatcggtgcg cgtggcgccg ccagccgctg cgtagagcga gaagccaccc
     3961 gtgtaaccga acagattcag cacgcggcgg ccacgtgcgc gttttccgac ctcggcgcgg
     4021 ttctcgcgtt gatcgagaaa cagcccgcct ttttgaccgt gcgcgaggtc gacgacgaag
     4081 atcaggccat tttcgcggac ttcgagcggt tcctctgcgc cgctgcgcat ttcacggtcg
     4141 atcacacgtt tgacgccgac gcgcggctcg gcgcggagca gtgccgccaa atcgccgtaa
     4201 aaagcgcggg ctccgctccc gtcgaagcgc acgctcgcca cgtcgccgta aacgtcgacg
     4261 tgcacgcccg gcaggcggtc ggcttcgccg tgtacccagc gaaacgcgtt cgtctgctcg
     4321 agatcaagcc gtagcagccg cagcgtggcc gcggctgcca gccgttcggc gataccgcgc
     4381 ccgggctcga actcacgctc ggtcgcgagc acccgcacgg cgatcggcga gcgcccgtcc
     4441 caaaatccga ccgcaaggaa ccgaccgtct ttgccgcata cctcgacgac cgcgccgtcc
     4501 tcgagctcgg gcgccggcgc gagcgcgtcg cggtaaaccc acggatgccc gcgccggatc
     4561 gagcgcgcca aatccttctt caaccgcacg agggatcgcg acaagcggcg cagtgtagcc
     4621 cgcgtcccag ggcggttttg accggacgaa gtgaccctag atagatcgca taagatacat
     4681 tatgtaaact aat
//
LOCUS       DATIML010001304         9526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2874460, whole genome shotgun sequence.
ACCESSION   DATIML010001304 DATIML010000000
VERSION     DATIML010001304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 9526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9526
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2874460"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..1409)
                     /locus_tag="VLJ38_22435"
     CDS             complement(153..1409)
                     /locus_tag="VLJ38_22435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42364.1"
                     /translation="MKRARTVSGWLLLGLLGGAVALGCGSSERPKHNSNSGANAGTGG
                     TDGTSTTVQPPGNGGGGGESEYNSLCGIPDTNFCVPDFETNALCLEFVGGSGGGSGRA
                     GKGGASNGGTGATTATGGSGRGAGGSVSSPGGAGGEGGIGGSEGGMSQAGVGAVAGES
                     TSNGAQSGQGGENPGGAGQATLGGAPGETGTGGSISTGGTSGTSQASAGRAGGAALNA
                     SISCQVIESPNHKGLPLSTCRPAGSGTEGSPCFSGSDCAPKFACVGHGPGQCRAYCCS
                     GPDQCQAYTGTHCAVEPLVPEPKSTRLLPVPVCMPAVKCSLAEPYPCPDRTCSCPKET
                     ACVVVTDDGTTSCVPVSDLPSEEVGGEGLPCPCARGYVCSSASNKCVRLCEVGAAGTC
                     RCQASPALPPGWGTCVGVPAKDAAAQ"
     gene            complement(1406..3448)
                     /locus_tag="VLJ38_22440"
     CDS             complement(1406..3448)
                     /locus_tag="VLJ38_22440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42365.1"
                     /translation="MKPSSLLSASLLASACVLLSASSHAVGTRRLTLDKEADFKGGDL
                     KGVAVDSRGSVRAGFDLGALPITQANSIWSALPQKDGSVLLGTGNEGKLFKVQAGAVT
                     LVAETKALAVTSLVSAWGGTVAVGTLPDGKVLKLERGKLVEVATLKGAEHVFALAFDA
                     KNNALYAATGPEGKLFRITQQGNAQVYFDAEEQHLMSVAVGPDGAVYAGASDKAKLYK
                     ITGPGRATVLYDFGRTEVRGVVVGPKGDVYAIANDLKTGFTVPAKPSRTQEGAPAAPT
                     PPAAKAKGKGTLYHFTPDGLPDRLYDNDDEHFTSLALGDDGRAYVGTGVEGRVYAVDR
                     AGRVALVADTDERQVGALVLAGGTRLVASSDPAVLHPLKGIGGADAVWTSKVFDAGLR
                     ARFGRMAWEASGKVQISTRTGNTKDPDDTWSDWSRETDTPAAVASPPARFFQVRARFA
                     QDPNAELSEFEVAFVTDNLKATIDDVNARPRRDSNDDSIKTSGGPVTRKPEAKLSISW
                     KVDNPDKDEMRYRLQYRVVGTATWYDLTRRDEVLTKESYDWDTSTLPEGRYRVRVIGS
                     DELANPPDRVTRADAESGIVLVDNTPPRIENLRATGRRVQGVAQDGVGPIQRIEVSVA
                     GRDEWVPFYPKDGIFDEAREEFDFDATVLSATGPALLAIRVYDDANNFVIQNIALK"
     gene            complement(3454..5316)
                     /locus_tag="VLJ38_22445"
     CDS             complement(3454..5316)
                     /locus_tag="VLJ38_22445"
                     /inference="COORDINATES: protein motif:HMM:NF017400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIVB peptidase S55 domain-containing protein"
                     /protein_id="HSU42366.1"
                     /translation="MRESLLLVGAALLGLAAALPEGLARADGRAVRPNVMGVSEIKPG
                     MKGYGLTVFEGTKPERFDVEVIGVLQNFRPKQEVILIKTHHPRLEVAKVVAGMSGSPI
                     YIDGKMIGAYAYGWTFGSEPIAGVTPIRTMLDEMALPLPDTLNGWPLHLVPGKKSERT
                     AAAADTRGRYRGELGQYDLRRHAAEVSRTAFESSPTPVRPVATPLLVGGLTPGAIRLA
                     SDLLAPLGLEPLQAGGGGTTPEPDAPKQFEDGGAIGVELIRGDMSATGLGTVTRVEGD
                     KLVAFGHPMMEAGNTALPTAVGRVLWILASEQRSFKIGMPVRSMGTLVNDRVASIVVS
                     QSAKAPVIPVKMSIHGVPGVPLSTWNFEVAHERFLTPSFLAVALGSGLQSVANEQQDV
                     SWSAVSKLKIKSYGEITLRDFGVSMGGTPDAGEFARASIVRAVGAILNNPWQPAQIES
                     VETSVDLHYARELYRLRGAELVSSEIDAGEPARIRLTLVPFAGPVVEKTLSVPLPAYL
                     AGKTVTLEIGPGYAEERDRAAPDTLAELIHNFEDPTQPPKSVVVSYASPDATVTHKGR
                     IAADLPMGALDTLRPTSSTIAPETYTTTVRQAYPVDQYLVGRDRVTVTIRPVVR"
     gene            5427..5684
                     /locus_tag="VLJ38_22450"
     CDS             5427..5684
                     /locus_tag="VLJ38_22450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42367.1"
                     /translation="MKAPLPLDLALLLLPPAALALFVTAHVAIVTRLFGTPPRWRAAV
                     ALVLPPLAFFWGKKAKMIALCRLWLGALVAYVLTLALAFAS"
     gene            5789..6745
                     /locus_tag="VLJ38_22455"
     CDS             5789..6745
                     /locus_tag="VLJ38_22455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42368.1"
                     /translation="MRPLTNYWRPATLAVLTAVWLTDSRAQGAEVQQAVHVAYAAPAG
                     CSSRAVFVHELMSRTSRVRLVEDTQPAAIFAVDLADRGARVRGELRLIEPDGSETTRV
                     VDGASCEEVVPALALIAAVLVDPESLTRATTPAPAAPMPPSWRFVPSLAAGAALATAV
                     GPGLALGPWLELGLEVEQNGRRGPSIALAVEYLKNPTQSTTAGNADFSTTLGRLSVCP
                     LRWPRTGPAFGSLCGAFEAGAVHAAGSHTLGEHSYSVLWLAVDPAVAFAYRPVAWLSA
                     GLDGLLVFPLLRDTYYFGPNVPSYSVPAVGVTAQARLAATWP"
     gene            6834..7406
                     /locus_tag="VLJ38_22460"
     CDS             6834..7406
                     /locus_tag="VLJ38_22460"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU42369.1"
                     /translation="MELLRPGARKQLAGPVREARLARLLNDHFRMVWRALRRLGVPAS
                     SVDDAAQEVFIVASKKLDAIEPSHERRFLYGVALRVAANARRARAARPETPETQALER
                     APGSVPNPEVLLDRKRAREQLDAALDALPDELRTAFVLFELEGCSAPEVAALVGIPVG
                     TATSRLRRARVAFHAAVNELRARLSSGGTL"
     gene            7403..8284
                     /locus_tag="VLJ38_22465"
     CDS             7403..8284
                     /locus_tag="VLJ38_22465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42370.1"
                     /translation="MSDLIPLLADHPDELEAALLRSAEDDEPERAALENVAASLGVSA
                     GALAATAAGAHAASGSAVMQQLTLGSVVKWLAAGLGAGALASGGAHWLAERVHVPVES
                     SSATVLARPAPQPARPSRARTAEPDASPAPLALAARTPTGASAAPTAAARTAALPTEV
                     GGPRAASPASAGPASISFDPLEDTHAPTPAISAAPASTLGEETKALDSARALILSGRS
                     APALAALDRYRARFPRGALSAEASLLRIEALLRSGQRPQAEREAETLIARAPQSRHAT
                     HARALLGMTPRRANPGE"
     gene            8318..>9526
                     /locus_tag="VLJ38_22470"
     CDS             8318..>9526
                     /locus_tag="VLJ38_22470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42371.1"
                     /translation="MTVGHWWKVFGASWVVALSAIPLVGCAGTSHELGHADDSEGGIN
                     GELSTGGTGATGANGGRAGKGGAAAGGSTATGGSTATGGSTATGGSTAMGGTAASNDA
                     GGAPDGTGATAATGGTGSSRHLLPMRGASQKLDVLFMLDDSIGMADKQTLLSRSTSTL
                     LTRFTSPRCLEASGQPTGDRADADGNCPHGVPEFSPIQDIHVGIITSSLGDHGSGDVC
                     SDAENTLHQQNGEPQWNYDDRAELLPAVRDGVTDPGNTGFLAWGPSSTDGAAFTQDAS
                     DQITAAGEHGCGYEAQLESWYRFLIDPEPVGSLTHDTLALTQRGSVNQVVLAERQAFL
                     RPDSALLIVMLSDENDCSISDENDSQGWVVGYKGGVGRPLSFQMPYATSVCDANPNDP
                     CCSPCTAGAAG"
BASE COUNT         1384 a         3380 c         3246 g         1516 t
ORIGIN      
        1 cgacgccctc gacgcgctcg gtgacgttcg cgaagccgcg gccgcgggtc gcgacttcca
       61 ggacggcttg atgagtcttc acgatttctc gacggttcgg cgggcaagac gtcttagcgc
      121 ccggacgcgc ggctgtccgt gactcgccac gttcattgcg ccgctgcgtc cttcgcgggg
      181 acgcctacgc aggtacccca gcccgggggc agcgcgggcg atgcctggca acgacaagtg
      241 ccggccgccc cgacttcaca cagccgtaca cacttgttcg aggcgctcga gcagacgtaa
      301 ccgcgcgcgc aggggcaggg cagcccctcg ccgcccactt cctcggaggg aaggtccgac
      361 acgggcacgc agctcgtcgt gccgtcgtcg gtcacgacca cgcacgcagt ctcttttggg
      421 cagctgcagg tgcggtcggg gcacgggtag ggctcagcta ggctgcattt gacggccggc
      481 atgcagaccg gcaccgggag caggcgtgtg ctcttgggct cggggacgag cggctcgacc
      541 gcacagtgcg tgcccgtgta cgcctggcac tggtcgggcc cggagcagca ataagcgcga
      601 cattgtccag gaccgtggcc cacgcacgcg aacttcggcg cgcagtcgga gcccgagaaa
      661 cacggcgagc cttccgtccc gctacccgcc ggacggcatg tcgaaagggg cagccccttg
      721 tgattcgggc tttcgatgac ctggcaagag atcgacgcgt tcaacgcggc cccgcccgcg
      781 cgacctgccg acgcttgact cgtgccagac gtgccgcccg tcgagatgct gccgcccgtg
      841 ccggtctcgc cgggagcgcc gccgagcgtc gcctggccgg cgccaccggg gttttcaccg
      901 ccctgtccgc tctgagcgcc attcgaggtg ctctcgcctg cgacggcgcc gacgcctgcc
      961 tgcgacatgc cgccctcgga acccccgatg ccgccttcgc cgccggcgcc gcccggtgac
     1021 gaaacactgc cgcctgcgcc gcgaccgcta ccgcccgtcg cggtcgtcgc gcccgtgccg
     1081 ccgttgctcg cgcccccttt gccagcgcgg ccgctaccgc cgccactgcc gccgacgaat
     1141 tcgagacaga gagcgttcgt ctcgaaatcc gggacgcaga agttcgtgtc gggaatgccg
     1201 cacaacgaat tgtattccga ctcgccgcca ccgccgccgt tgcccggcgg ctggacggtc
     1261 gtgctggtcc cgtcggtgcc gcccgtgccc gcgttcgcgc cgctgttcga gttgtgcttc
     1321 gggcgctcgc tcgacccgca gcccagtgcg acggcgccgc ccagcaagcc gagcaagagc
     1381 cagccggaga cggtgcgcgc gcgcttcact tgagagcgat attctggatc acgaagttgt
     1441 tcgcgtcatc gtagacgcga atcgcgagca atgccgggcc ggtagcgctg aggaccgtcg
     1501 cgtcgaagtc gaactcctcc cgcgcttcgt cgaaaatgcc gtccttgggg tagaagggca
     1561 cccactcgtc cctaccggcg acggacacct cgatgcgctg gatcggtccc acgccgtcct
     1621 gggccacgcc ttggacgcgc cgcccggtcg cgcgcagatt ctcgatgcgc ggcggcgtgt
     1681 tgtcgacgag cacgatgccg ctctccgcgt cggcgcgtgt cacgcggtcc ggcggattgg
     1741 caagctcgtc gctcccgatc acgcgcacgc ggtagcgccc ttcgggcagc gtgctcgtgt
     1801 cccagtcgta gctctctttg gtgagcacct cgtcgcgccg cgtgaggtcg taccaggtgg
     1861 ccgtgccgac cacgcggtac tgcaagcggt agcgcatctc gtctttgtcc gggttatcga
     1921 ccttccaaga aatcgagagc ttggcctcgg gtttgcgcgt cacgggtccg cccgaggtct
     1981 tgatcgagtc gtcgttcgag tcgcggcgcg gccgcgcgtt cacgtcgtcg atcgtcgcct
     2041 tcaggttgtc ggtgacgaac gcgacctcga actcggagag ctcggcgttc ggatcttgcg
     2101 cgaagcgcgc gcgcacctga aaaaatcgcg cgggcggact cgcgacggca gccggcgtgt
     2161 ccgtctcgcg gctccagtcg ctccaagtgt cgtccggatc cttggtgttg cccgtgcgcg
     2221 tggaaatctg aactttgccg ctcgcttccc acgccatgcg tccgaagcgc gcgcgcaggc
     2281 ccgcgtcgaa caccttgctc gtccaaacgg cgtcggcgcc gccgatgccc ttgagcgggt
     2341 ggagtacggc cggatcactc gacgcgacga gccgcgtccc gccggctagc acgagcgctc
     2401 ccacctgccg ttcgtcggtg tcggcgacga gcgcgacgcg cccggcgcga tcgaccgcgt
     2461 acacgcggcc ctcgaccccc gtaccgacgt acgcccgtcc gtcgtcgccg agcgcgaggc
     2521 tcgtgaaatg ctcgtcgtcg ttgtcgtaga gacggtccgg caagccgtcg ggcgtgaagt
     2581 gatagagcgt gcctttgccc ttcgctttgg cggcgggcgg cgtcggcgcc gcgggcgcgc
     2641 cttcttgcgt gcgcgaaggc ttggcgggga cggtgaagcc cgtcttgagg tcgttggcga
     2701 tcgcgtacac gtcgcccttc ggccccacga cgacgccgcg cacctcggtg cggccgaagt
     2761 cgtagagcac cgtggcgcgg cccggccccg tgatcttgta gagcttcgcc ttgtcgctcg
     2821 cgcccgcgta cacggcgccg tccggcccga cggcgacgct catcaagtgc tgctcctcgg
     2881 cgtcgaagta gacctgcgcg ttaccctgct gggtgatgcg gaagagcttg ccttcggggc
     2941 cggtcgccgc gtaaagcgcg ttgtttttcg cgtcgaacgc gagcgcgaac acgtgctcgg
     3001 cgcccttcag cgtcgcaact tccacgagct ttccgcgctc gagcttcagc accttgccgt
     3061 cggggagcgt gccgaccgcg acggtcccgc cccaggcgct cacgagcgag gtcacggcga
     3121 gcgccttggt ctccgcgacg agcgtcacgg cgccggcctg caccttgaac agcttgccct
     3181 cgttgcccgt gccgagcagc acggagccgt ccttctgcgg cagcgcgctc cagatcgaat
     3241 tggcctgcgt gatgggcaac gcgcccagat cgaagcccgc gcgcacggag ccacgcgagt
     3301 ccacggcgac gcccttgaga tcgccgccct tgaaatcggc ttccttgtcg agcgttaaac
     3361 gccgcgtacc gacggcgtgc gaggacgccg agagcagcac acaagccgat gccaaaaggc
     3421 tcgcggagag aagggatgaa ggcttcatgg gttttagcgg acgacgggtc gaatggtgac
     3481 ggtcacgcga tcacggccca ccagatactg gtcgaccggg tacgcttggc gcaccgtggt
     3541 ggtgtacgtt tcgggggcga tcgtgctcga ggtcggccgc agcgtatcga gggctcccat
     3601 cggcaaatcc gcggcgatgc ggcccttgtg cgtgacggtc gcgtcggggg acgcgtaact
     3661 cacgacgacg gatttcggcg gctgcgtcgg gtcctcgaaa ttgtgaatca gctccgcgag
     3721 cgtgtcgggc gccgcgcgat cgcgttcttc ggcgtagccg gggccgatct cgagcgtgac
     3781 ggtcttgccc gcaaggtagg ccggcagcgg caccgagagt gttttttcga cgacgggtcc
     3841 cgcgaacggc acgagcgtca gccgaatgcg cgcgggctcc ccggcgtcga tctcgctcga
     3901 cacgagctcg gcgccgcgca ggcgatagag ctcgcgcgcg tagtgcaaat cgacgctcgt
     3961 ctcgacgctc tcgatttgtg cgggctgcca gggattattc aggatcgcac ccacggcgcg
     4021 cacgatcgaa gcgcgcgcga attcgccggc gtcgggcgtg ccgcccatcg agaccccgaa
     4081 atcgcgcagc gtgatctcgc cgtagctctt gatcttgagc ttgctcacgg cgctccagct
     4141 cacgtcctgt tgctcgttgg cgacggactg caagccgctg ccgagcgcga ccgcgaggaa
     4201 cgagggcgtg aggaagcgct cgtgggcgac ctcgaaattc cacgtcgaga gcggcacacc
     4261 cggcacgccg tggattgaca tcttcacggg aattacgggc gctttcgccg actgcgagac
     4321 gacgatcgac gcgacgcgat cgttcacgag cgtgcccatc gaacgcacgg gcatgccgat
     4381 cttgaacgag cgctgttcgc tcgccaagat ccagagcacg cgaccgacgg ccgtcggcag
     4441 cgccgtgttc cccgcttcca tcatcggatg cccgaacgcg acgagcttgt cgccctcgac
     4501 gcgcgtcacc gtgccgaggc ccgtggcgct catgtcgccg cgaatcagct cgacgccgat
     4561 cgcgccgccg tcctcgaact gcttgggagc gtcgggctcc ggcgtcgtac cgccgccgcc
     4621 ggcctgcagc ggctcgagtc cgagcggagc gagcaagtcg gaagcgaggc gaatcgcgcc
     4681 cggcgtgagc ccgcccacga gcagcggcgt cgccacgggc cgcacgggcg tcggactgct
     4741 ctcgaacgcc gtgcgcgaca cctcggcggc gtgccggcgc agatcgtatt gcccgagctc
     4801 gccgcggtaa cggccacgcg tgtcggctgc ggcggccgtg cgctcgctct tcttgcccgg
     4861 gacgaggtgg agcggccagc cgttgagcgt gtccggaagc gggagtgcca tctcgtcgag
     4921 catggtgcgg atgggcgtga cgccggcgat gggctcgctg ccgaacgtcc agccgtaggc
     4981 gtacgcgccg atcatcttgc cgtcgatgta gatggggctg ccgctcatgc ccgcgacgac
     5041 cttggcgacc tcgagacgcg ggtggtgcgt cttgatcaga atcacctctt gcttcggtcg
     5101 aaaattctgc agcacgccga taacctcgac gtcgaagcgc tcgggtttgg tcccctcgaa
     5161 cacggtcagg ccgtagccct tcatgcccgg cttgatctcg ctcaccccca tgacgttcgg
     5221 ccgcacggcg cgcccgtcgg cgcgagcgag accctcgggc agcgcggccg cgagcccgag
     5281 caaggcggca ccgaccagca aaaggctttc ccgcatggac gcgggagtct acgcgatccg
     5341 aaccccccgt ccaccgcgca taatcacgcc cgaacggccc cgcgcgccgg cgaacgccgc
     5401 accgagtggc atggtaaagg tcgcgcgtga aggcgccttt gccgctcgat ctcgcgctcc
     5461 tcttgctacc gcccgcggcg ctcgccctgt tcgtgacggc ccacgtcgcc atcgtcacgc
     5521 gcctcttcgg aacccccccg cgctggcgcg ccgccgtcgc gctggtcctg ccgcccctcg
     5581 cgttcttttg gggaaaaaag gcgaaaatga tcgcgctctg tcgtctctgg ctcggcgccc
     5641 tcgtcgccta cgtactcacc ctggcgctcg ccttcgcgag ctgacacgct agtcgggccg
     5701 gcaggcgctc atggcaccac gctcgcactc gtcgcggccg gccacgtcag tcgaagcgcg
     5761 agcggtgcac cagtcgttcg atgtgtgcgt gcggcccctg acgaactact ggcgtccggc
     5821 cacgctcgcc gtcttgaccg ccgtgtggct cacggatagc cgcgcgcaag gcgccgaggt
     5881 gcagcaagcc gtccacgtgg cgtacgccgc tccggccggg tgctcgagcc gcgccgtctt
     5941 cgtgcacgag ctcatgtcgc gcacctcccg cgtgcgcctg gtggaggaca cgcagcccgc
     6001 agccatattc gccgtcgatc tcgccgatcg cggcgcacgc gtcaggggag agctgcgcct
     6061 catcgagccg gacggcagtg aaacgacacg tgtcgtcgat ggtgcgtcgt gtgaagaggt
     6121 cgtaccggcg ctcgcgctca tcgcggcggt gctcgtcgac cccgaatcac tgacgcgcgc
     6181 gacgaccccg gcgcctgccg cgccaatgcc gccttcctgg cgattcgtgc cgagcctcgc
     6241 cgcgggcgcg gcactcgcga cagccgtagg accggggctc gcgctcggac cctggctcga
     6301 gctcgggctc gaggtggagc agaacgggcg gcgtgggccg tcgatcgcgc tcgccgtcga
     6361 atacctgaag aatcctacgc aatcgacgac cgccggcaac gccgattttt cgaccacgct
     6421 ggggcggctc agcgtctgtc cactacgctg gccgcgcacc ggccccgcgt tcggctcgct
     6481 gtgtggcgcg ttcgaggcgg gcgccgtgca tgcagcgggt tcgcacacgc tcggcgagca
     6541 ctcgtactcg gtactgtggc tcgcggtcga ccctgccgtc gcgtttgcct atcgacccgt
     6601 tgcctggctg agcgccgggc tcgacgggct cctcgttttt ccgctgctgc gggatacgta
     6661 ctatttcggc ccgaacgttc cgtcgtactc cgtgcctgcg gtgggggtga ccgcgcaagc
     6721 tcggctcgcg gcgacctggc cgtgatcgat tcgcgaggcg tgcgacattc gtatccgagg
     6781 tgcgcgccag gaccccgacc ccgcttgcgg ctactcatgc cgaagggcca gccgtggagc
     6841 tgctccgccc cggcgcccgg aagcagctgg ccggacccgt gcgggaggcg cgcctcgcgc
     6901 gtctgttgaa cgaccacttt cgtatggtct ggcgagcgct ccgccggctg ggcgtgccgg
     6961 cgagctccgt tgacgatgct gcccaagagg tgttcatcgt cgcgtcgaag aagctcgacg
     7021 ccatcgagcc gtcgcacgag cggcgcttcc tctacggggt cgcgctgcgc gttgctgcca
     7081 acgctcgccg agcgcgcgcc gcacggccgg aaacgcccga gactcaagca ctcgagcgcg
     7141 cccccggctc ggtccccaat ccggaggtac tgctcgaccg caagcgtgcg cgcgagcaac
     7201 tcgacgccgc gctcgacgcg ctacccgacg agttgcgtac tgccttcgtc ctgttcgagc
     7261 tcgaggggtg ctcggcgccg gaagtcgccg cgctggtcgg catccccgtc ggaacggcca
     7321 cgtcgcgctt gcggcgggca cgcgtagcct ttcacgccgc ggtgaacgag ctccgcgcgc
     7381 gtctgtcgag cggagggacc ctatgagcga tctgataccg ttgctcgctg atcatcccga
     7441 cgagctcgaa gcagcactgc tgcgctccgc ggaagacgac gagccggagc gcgctgcgct
     7501 cgaaaacgtc gcggcttcgc tgggggtgag cgcgggcgcg ctcgccgcga cggcagcagg
     7561 ggcgcatgcg gcaagcggca gcgccgtcat gcagcagctg acgctgggct cggtcgtgaa
     7621 atggctcgca gccggcctcg gtgcgggcgc gctggcgagc ggcggcgctc attggctcgc
     7681 ggagcgagtt cacgtacccg tcgagagctc gagcgccacc gttttggctc gaccagcccc
     7741 gcagcccgcg cgcccatcgc gagcgcggac cgcggagccg gacgcgtcgc ccgcaccgct
     7801 cgcactcgcc gcccggacgc cgaccggtgc ctcggcggcg cccacggcag cagcgagaac
     7861 ggccgcgctg cccacggaag taggcggtcc gcgcgcggcg tcgccggcgt cggccgggcc
     7921 tgcctcgatc tcgttcgacc cactcgaaga cacacacgcg cccacacccg ccatttctgc
     7981 cgcacccgcg tcgacgctcg gggaggagac gaaggctctc gactcggcgc gcgcgctgat
     8041 tttatcgggt cgctcggctc cggcgctcgc cgcgctcgac cgctatcgag cgcgctttcc
     8101 gcgcggcgca ctttcggccg aagcgtcgct cttgcgcatc gaggcgctct tgcgctccgg
     8161 tcagcgtccg caagccgagc gtgaagcaga gacactcatc gcacgcgcgc cccagagccg
     8221 ccatgcaacc cacgcccgcg cgctgctcgg catgacccct cgacgcgcga acccgggtga
     8281 gtgatcgatt cgcgcggctc gccacatgag ggcatgcatg acggttgggc actggtggaa
     8341 ggtcttcggg gcatcttggg tagtggctct ctcggccatc ccgctcgttg gctgtgccgg
     8401 cacctcgcac gagctcgggc atgcggacga cagtgaagga ggcatcaacg gcgaactctc
     8461 gaccgggggc acgggggcga cgggagccaa cggcggtcgg gcgggcaagg ggggcgctgc
     8521 cgccggcggc agtacggcga ccggcggcag tacggccacc ggcggcagca cggccaccgg
     8581 cggcagcacg gcgatggggg gcacggccgc gagcaatgac gcaggcggcg cgcccgacgg
     8641 cacgggcgcg actgcagcga cgggcggcac gggctcctcg cggcacctct tgcccatgcg
     8701 cggcgcgagc caaaagctcg acgtcttgtt catgctcgac gactccatcg gcatggccga
     8761 caagcaaact ctgctctcgc gcagcacgag cacgctgctc acgcgcttca ccagtccccg
     8821 ctgcctcgaa gcgagtggcc agcccacggg cgaccgtgcc gacgcagacg gcaattgccc
     8881 acacggcgtc ccggagtttt ccccgatcca ggacatccac gtcggcatca tcacctcgag
     8941 tctgggcgac cacggcagcg gcgatgtctg ctcggacgcc gagaatacgc tccatcagca
     9001 gaacggcgag ccgcagtgga actacgacga ccgcgcagag ctcttgcccg ccgtgcgcga
     9061 cggcgtgacc gatccgggca acacgggctt tctcgcgtgg gggccgagct cgactgacgg
     9121 cgcggcattc acccaggacg ccagcgatca gatcacggcg gcgggcgagc acggctgtgg
     9181 ttacgaagcg cagctcgagt cctggtatcg cttcctgatc gatccggagc cggtcggttc
     9241 gctcacgcac gacaccttgg cgctgaccca gcgcggcagc gtgaaccaag tcgtgctcgc
     9301 agagcgccag gcgttcttgc ggccggactc ggcgctcctc atcgtgatgc tcagcgacga
     9361 gaacgattgt tcgatcagcg acgaaaacga cagccaaggc tgggtcgtcg gttacaaggg
     9421 cggggtcggc cgcccgctta gctttcaaat gccgtatgcg acttcggtct gcgacgcgaa
     9481 tccgaacgac ccgtgttgct cgccgtgcac ggcgggcgcg gccggc
//
LOCUS       DATIML010001305         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_855285, whole genome shotgun sequence.
ACCESSION   DATIML010001305 DATIML010000000
VERSION     DATIML010001305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_855285"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..526)
                     /locus_tag="VLJ38_22475"
     CDS             complement(<1..526)
                     /locus_tag="VLJ38_22475"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HSU42372.1"
                     /translation="MSVVAIVGAQWGDEGKGKIVDIYTEFAEVVVRFAGGPNAGHTLV
                     VGDDKLVVRLLPSGILRPATLCVLGQGMVVDPDVLLGEIDELGRRGHVELGSRLALSD
                     RAHLILPYHVLVDTLRETTAPAGRAIGTTKKGIGPAYEDKARRNGVRAGDLRHPERLR
                     ERVEAALAGWAPTIK"
     gene            complement(623..>1774)
                     /locus_tag="VLJ38_22480"
     CDS             complement(623..>1774)
                     /locus_tag="VLJ38_22480"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HSU42373.1"
                     /translation="HGYEQVMLPMFEYGAVLERGLGALVDEELLRFIEPETGSVVVLR
                     PDMTAQIARIMGTRLADAPGPARLSYQGNIVRRQHERARHERQIPQAGIELLGRGGIE
                     ADLEVLEVAVAAVRRAGLDDFAVDLGHAGIAAALLDELEPDARTPIVEALGIRDVPEL
                     TRRAEAQGLRGAELRALAELPTLHGSSGVWEAAERALGSTKARAGLEELRQLAEALER
                     AELAPRLLIDLAETRDLAYYTGPVFQIHAAGPGRFIGAGGRYDGLCSRFGRSRPAAGF
                     AFGLDELSWALAVAGRPRRRAARVLVFGGDSAVLAGLRACRVACAASAGGDPLAYARA
                     WRYTHVVEITLTTATLVRVEDQERQALPRDARALGAAAAALLERAGSTE"
BASE COUNT          273 a          636 c          615 g          250 t
ORIGIN      
        1 acttgatcgt gggcgcccac cccgccagcg ccgcttccac gcgttcacgc aggcgctcgg
       61 ggtgacggag atcgcccgcg cgcactccgt tgcggcgcgc tttgtcctcg taagccggac
      121 cgatgccctt cttcgtggtc ccgatcgcgc gcccggccgg agccgtggtc tcgcgcagcg
      181 tgtcgaccag cacgtggtac ggcaggatca gatgtgcgcg gtcgctcagc gccaggcgcg
      241 acccgagctc gacgtgaccg cggcgcccga gctcgtcgat ttcgccgagc aacacgtccg
      301 gatccacgac catgccctgc ccgagcacac agagcgtcgc cgggcgtagg atgccgctcg
      361 gaagcagtcg gacgacgagc ttgtcgtccc cgacgacgag cgtgtgcccg gcgttcggcc
      421 cgccggcgaa acgcacgacg acttcggcaa actccgtata gatatcgacg attttcccct
      481 tgccctcgtc gccccactgc gcgccaacga ttgctacgac cgacatgact atgctcgtac
      541 tttctgaact cgagtttggc aggcttggaa gaaaagatcg cgatcgcctg tcgggctcgg
      601 ccccgacgga tgatcctcac cactactcgg tgctgccggc ccgttcgagc agcgcggctg
      661 ccgcggcgcc gagcgcccgc gcgtcgcggg gcagcgcctg gcgttcctgg tcttcgaccc
      721 ggacgagcgt cgccgtggtg agcgtgattt ccacgacgtg cgtgtagcgc caagcgcggg
      781 cgtaggcgag cggatcgccc ccggcagagg ccgcacaagc cacgcgacag gcgcgcaacc
      841 ctgctaaaac ggccgaatcc ccaccgaaaa cgagcactcg cgcggcccgg cgccgtggcc
      901 ggccggcgac ggcgagcgcc caggagagct cgtccaaacc gaacgcgaac cctgccgcgg
      961 gacgcgaccg gccgaaccgg gagcagagcc cgtcgtaacg accgcccgcg ccaatgaagc
     1021 ggccgggacc ggcggcgtgg atctgaaaga cgggacccgt gtagtaggcg aggtcacgcg
     1081 tttcggcgag atcgatgagg agacgagggg cgagctcggc ccgttccagc gcttcggcga
     1141 gctggcggag ctcctcgagc ccagcgcgcg ccttggtgga accgagcgcg cgctcggccg
     1201 cctcccagac gccgctcgag ccgtgcaggg tcggcagctc ggcgagcgcg cggagctcgg
     1261 cgccgcgcaa accctgcgcc tcggcgcgtc gcgtgagctc gggcacgtcg cggatgccca
     1321 gggcttcgac gatgggcgtg cgtgcgtcgg gctcgagctc gtcgagcagc gccgcggcga
     1381 tgcccgcgtg gccgagatcg acggcgaagt cgtcgagccc cgcgcgccgt accgctgcca
     1441 ccgccacctc gagcacttcg aggtcggctt cgatgccgcc ccgccccaag agctcgatac
     1501 ccgcctgcgg gatctgccgc tcgtggcgcg cgcgctcgtg ctggcggcgc acgatgttac
     1561 cctgatagct gagtcgcgca gggccaggcg catcggcgag ccgcgtcccc atgatgcgcg
     1621 cgatctgggc ggtcatgtcc ggcctgagca cgaccacgga gccggtttcg ggttcgatga
     1681 aacggagtag ctcctcgtcg accagagcgc cgaggccgcg ctcgagcacg gcgccgtact
     1741 cgaacatcgg gagcatgacc tgctcgtagc cgtg
//
LOCUS       DATIML010001306         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4606736, whole genome shotgun sequence.
ACCESSION   DATIML010001306 DATIML010000000
VERSION     DATIML010001306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4606736"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VLJ38_22485"
     CDS             <1..304
                     /locus_tag="VLJ38_22485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42374.1"
                     /translation="KAVPPPEKHSKATKPAHSEPPPKPSKREPPPKAAPAKPAPKPAP
                     PPPKPPEPKPKPKPAAKPPEPKPEPKPEPKPAPPERSEVPPPPKPTQGTAKPDFEP"
     gene            complement(340..1089)
                     /locus_tag="VLJ38_22490"
     CDS             complement(340..1089)
                     /locus_tag="VLJ38_22490"
                     /inference="COORDINATES: protein motif:HMM:NF015921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42375.1"
                     /translation="MPTLNKLPHVTLVFWVMKIAATTLGETAGDLLSMTLAVGYAVSS
                     VILLGCFVLALLGQLAARRYHPALYWSVILATSTAGTTMSDFMDRSLGLGYAKGSALL
                     VTLLSAVLLVWRRSEGSLAVDRALSRRAELFYWTAILLSNTLGTALGDFLADDSGLGF
                     AGGALLIASLLALVVALTLLTRLSRVALFWVAFVLTRPFGATMGDVLTKSPKLGGLGL
                     GTLGSSAVLFALLAGFVVRESFVLRTSRTAA"
     gene            complement(1094..>2305)
                     /locus_tag="VLJ38_22495"
     CDS             complement(1094..>2305)
                     /locus_tag="VLJ38_22495"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HSU42376.1"
                     /translation="TEALARGPVYAALAALAGGFIVSLTPCVYPMVAVTVSVFGARQA
                     KSRWEGAALSAAFVLGIVAMFVPLGVVAGLTGSIFGSVLQNRWVVVAMALLFLTLAAS
                     LFGAFELALPEGLTNRLAMIGGIGYRGAFLLGLACGLIASPCTGPVLTGILAWIAKTK
                     SAGLGALAMGAFALGLGVPFFVVGTFAVQLPKSGRWMVHVKSVLGIVLVVVAFYFLSG
                     VFPVLGAFARPGTLLFGVATAAIVLGLGLGAVHREFSDPVVGVKVAKGLGLVLTSGGL
                     FALVLGLVKPAEALAWQQGNLDSARAQALRESKPMIVDFTAAWCGACKELDKATFSAR
                     PVGVELGRFVAVRVDATNDEDPKVGAALQRFGVRGLPTVVIFDSRGREALRYTDFVPP
                     ERFLESIRAVD"
BASE COUNT          476 a          810 c          780 g          239 t
ORIGIN      
        1 caaggcggtt ccgccaccgg agaagcattc gaaagcgacg aagccagcgc atagcgagcc
       61 accgccgaaa ccttcgaaga gggagccgcc acccaaagct gcgcccgcca agccggcgcc
      121 gaagccagct ccaccgccgc ccaaaccacc cgaacccaaa cccaaaccca aacccgcggc
      181 caaaccgccc gaaccgaagc cggaacccaa gcccgagccg aaaccggcgc cgcccgaacg
      241 cagcgaagtg cccccgccgc cgaagccgac gcaaggcacg gcgaagcccg acttcgagcc
      301 gtgacgccgg cctgcgcggg cgcggcacct gaagcgcgct caagccgctg tgcgggacgt
      361 gcgtaagacg aagctctcgc gcacgacgaa tcccgcgagc aacgcgaaga gcaccgccga
      421 tgacccgagc gtgccgaggc cgagaccgcc gagcttgggc gatttcgtga gcacgtcgcc
      481 catggtcgcg ccaaacggtc gcgtgagcac gaatgccacc caaaacagcg cgacgcgcga
      541 gagtcgcgtc agcaacgtga gcgcgaccac gagcgcgagc aagctggcga tgaggagcgc
      601 accgcccgcg aacccgagcc cggagtcgtc cgccaagaaa tctccgagcg cggtaccgag
      661 cgtgttggaa agcagaatgg ccgtccagta gaagagctcg gcacggcggc tcagcgcgcg
      721 atcgacggcg agcgagccct cgctccggcg ccagacgagg agaacggccg agagcagcgt
      781 gacgagcagc gcgctgcctt tcgcgtagcc caggccgagc gagcgatcca tgaaatcgga
      841 catggtcgtg ccggcggtgc tcgtggcaag gatcacgctc caatagagcg ccggatggta
      901 gcggcgcgct gcgagttgcc cgagcagcgc gagcacgaag cagccgagca ggatcacgga
      961 gctcacggcg tagccgacgg cgagcgtcat cgagagcaaa tcgccggcgg tctcgcccag
     1021 cgtcgtcgcc gcgatcttca tgacccagaa gacgagcgtg acgtgcggga gcttgttgag
     1081 cgtgggcacg ccgtcagtcg accgcgcgaa tgctctcgag gaagcgctcg ggcggaacga
     1141 agtcggtgta gcgcaacgct tcgcggccgc gcgaatcgaa gatcacgacc gtgggcaggc
     1201 cgcgcacgcc gaagcgctgg agcgcggcgc ccactttggg atcctcgtcg ttcgtcgcgt
     1261 cgacgcggac ggccacgaag cggccgagct cgacgccgac gggccgcgcc gagaacgtcg
     1321 ccttgtcgag ctccttgcag gcgccgcacc aagctgccgt aaaatcgacg atcatcggct
     1381 tgctctcgcg aagcgcctgc gcgcgcgccg aatcgaggtt gccctgctgc cacgcgagcg
     1441 cctcggccgg cttgacgagc ccgagcacga gcgcgaacag gccgccgctc gtgagcacga
     1501 ggcccaagcc cttggcgact ttgacgccga cgaccgggtc ggaaaactca cgatgcaccg
     1561 cgccgagccc gagcccaagc acgatcgccg ccgtggcgac gccgaatagc agcgtccccg
     1621 gtcgcgcgaa cgcgccgagc acggggaaca cgccgctcag aaaatagaac gcgacgacga
     1681 cgagcacgat gccgagcacc gatttcacgt gcaccatcca gcgcccgctc ttcggcagtt
     1741 gcaccgcgaa cgtgcccacg acgaaaaacg gcacgcccag gccgagcgcg aacgctccca
     1801 tcgcgagcgc accgaggccg gcgctcttgg tcttcgcgat ccaggcgagg atgccggtga
     1861 gcactggccc cgtgcacggc gaagcgatga ggccgcacgc gagccccaag aggaacgcgc
     1921 cgcggtagcc gatgccgccg atcatggcga ggcggttggt gagtccctcg ggcagcgcga
     1981 gctcgaacgc gccgaagagt gacgccgcga gcgtcaggaa caagagcgcc atcgccacga
     2041 cgacccagcg gttctggagc accgatccga aaatcgagcc cgtcaggccc gcgacgacgc
     2101 cgagcggtac gaacatcgcg acgatgccga gcacgaaggc ggccgagagt gcggcgcctt
     2161 cccagcgact cttggcttgg cgtgcgccga agacgctcac cgtcacggcg accatcggat
     2221 agacgcaggg ggtgagactc acgatgaagc cgccggccag ggctgcgagg gccgcataga
     2281 ccgggccgcg cgcgagcgct tcggt
//
LOCUS       DATIML010001307         3557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4606772, whole genome shotgun sequence.
ACCESSION   DATIML010001307 DATIML010000000
VERSION     DATIML010001307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3557
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4606772"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1691)
                     /locus_tag="VLJ38_22500"
     CDS             complement(<1..1691)
                     /locus_tag="VLJ38_22500"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSU42377.1"
                     /translation="MAHEGVGKARVLVVDDEPQVLVALEDLLSDEFVVIKAESGEHAL
                     RVLEHEPDFAVIVSDQRMPKMSGDEFLSRLEGHSDATRLLITGFADLSAVIRAVNDGR
                     IFAYVAKPWEPGDFRVKVQRAAEHFKLAQELAQERRLLRDLMDNTPDGIYFKDAELRF
                     LRANRPIWERLSADGASLVGKRLSEVLDGDGDVLAGEAEERKLIESGVAVVEVTRPLV
                     RDGSLCWYSESKAPIRTPDGHVAGLVGISRDVTLRRQQDARIARLTKVYSLISGINAA
                     IVRARSREQLLTEACAIAVNLGGLALATVASVQAATGNAMLVAHAPKGAAIVERMLAN
                     GPKQSPLLAKLCREGARVVVLNDVAAAEELRIRDELLAHGLHSAALFPLASAGTLDAV
                     FCLFGVERDFFDAEEVKLLGEVTDNLSFALDHIGKRERLDFLAFHDGLTGLPNRDLFL
                     DRAAQQLAAGRREGKLVGVVVVDMGRFRQINETLGRQAGDALLIAIAGRLRETVGDGG
                     TLARLFGNTFAVLVPSVDSEAVVGLLIEDQILAVMRESFVMGGTEVLVSARVGAAV"
     gene            2097..>3557
                     /locus_tag="VLJ38_22505"
     CDS             2097..>3557
                     /locus_tag="VLJ38_22505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSU42378.1"
                     /translation="MDLIKNSVLLVDDEPQVLVALEDLLSEEFTVFKAHTPEQALELV
                     ESTRDLAVVLTDQRMPGMTGDELLTRVHRTSEATRMLVTGFADLAAVIRAVNDGRIFA
                     YVTKPWNPSELQIMVRKAVEHFRLAQELAHERTLLHDLMDNTPDGIYFKDRQLRFLRT
                     NRAFARTLNGTSSAELEGKRLLEVLPASHEAMRAEAEDQRVLGEGLPVQDVVHEYKQG
                     ETTRWISETKAPIHTPTGEIIGLVGIARDVSERVLAETALRRAEEQLLQSQKMEAIGQ
                     LAGGVAHDFNNVLSVILGYGELLLEEIPKDNPNHADIAVMVGAAQRAAALTRQLLAFS
                     RRRVVQPDIVDLNTIVWGLDKMLRRIIGEDIDLRTTLASSPATLRADPSQLEQIVMNL
                     TVNARDAMPKGGQLRIQTETVTLDERYASEHVGVKPGVYVLLRVADTGVGMDAATQKR
                     VFEPFFTTKEVGRGTGLGLSTVYGIVQQCGGHIVLES"
BASE COUNT          659 a         1191 c         1138 g          569 t
ORIGIN      
        1 acggcggcgc cgacgcgcgc cgagacgagc acctccgtgc cacccatcac gaacgactcc
       61 cgcatgaccg cgaggatctg gtcttcgatc aacaggccga cgaccgcctc gctgtccacg
      121 gagggcacga gcacggcgaa cgtgttgccg aacaggcgcg ccagcgttcc accgtcaccc
      181 accgtctcgc gcagcctgcc ggcgatcgca atcagcagcg cgtcaccggc ctgccgcccg
      241 agcgtctcgt tgatctggcg gaagcggccc atgtccacga cgacgacgcc gacgagcttg
      301 ccttcgcggc ggccggcggc gagctgctgg gcggcacgat cgagaaacag gtcgcggttc
      361 ggtagacccg tgagcccgtc gtggaaggcg aggaaatcta gccgctcgcg cttgccgatg
      421 tggtcgagcg cgaacgagag attgtccgtc acttcaccga gtagcttcac ctcttcggca
      481 tcgaagaagt cccgctcgac gccgaagaga cagaacacgg cgtcgagcgt gcccgcgctc
      541 gcgagcggaa acagcgcggc ggagtgcaaa ccgtgggcga gaagctcgtc gcggatgcgc
      601 agctcttccg cggcggcaac atcgttgagc acgacgactc tcgctccttc tcggcagagt
      661 ttcgcgagca aggggctctg cttcggcccg ttggcgagca tccgttcgac gatcgcggcg
      721 cccttcgggg catgcgcgac gagcatcgcg tttccggtcg cggcttgcac ggacgcgacc
      781 gtggcgagcg cgagcccgcc caggttgacg gcgatggcgc acgcttccgt gaggagctgc
      841 tcgcgactcc gtgcacgcac gatcgcggcg ttgattccgc tgatgaggga atacaccttc
      901 gtgagccgcg cgatgcgcgc gtcctgctgc cgtcgcagcg tcacgtcgcg tgaaatgccg
      961 accagccccg ccacgtgccc gtcgggagtc ctgatcggcg ccttgctctc cgaataccag
     1021 cacaagctgc cgtcacgaac gagcgggcgc gtcacttcca cgacggccac gccggactcg
     1081 atcagcttgc gttcttccgc ctcacccgcg aggacgtcgc cgtcgccgtc gagcacctcg
     1141 ctcaagcgct tgccgacgag cgacgctccg tccgcgctca gtcgctccca gatcgggcga
     1201 ttggcgcgca agaaccggag ctcggcgtct ttgaagtaga tgccgtcggg cgtgttgtcc
     1261 atcaaatcgc ggagcagtcg gcgctcttgc gcgagctcct gcgcgagctt gaaatgctcc
     1321 gcggcgcgtt gaaccttgac gcggaaatca ccaggctccc agggtttggc gacgtaggcg
     1381 aaaatacgac cgtcgttcac ggcgcgaatc acggcggaca gatcggcgaa cccggtgatg
     1441 agcaagcgcg tcgcgtcgga gtggccctcg agtcgcgaca agaactcgtc gcccgacatc
     1501 ttcggcatgc gctggtcgct cacgatcacg gcgaagtcgg gctcatgctc gaggacgcgg
     1561 agcgcgtgct cgccggactc cgccttgatc acgacgaact cgtcgctcag gagatcctcg
     1621 agcgcgacga gcacttgcgg ctcgtcatcg acgacgagca cgcgagcttt gccgaccccc
     1681 tcgtgagcca tcacgacggt acgatcctcg ggacggtgcg tccccggcgt tcgacacgca
     1741 tcactcgact tcataaagta gatacagccc gccacgggtc aagccgaatg acccctcaca
     1801 aatgagcgtt ctctcgtttc gtcttcgcga actcgtacaa gatcgacgca gagtgcctcg
     1861 tcccacacga acctacacag tcacgctctt cgcaaacatc gagtccgttt cggagcctgc
     1921 attcttgaca gctccgcgct cgggtcggca ggatcgaacc cgcgagttcg cccctaccgc
     1981 ttgggtgagt cgagcttcgt cgatgggacg tgggacgtat caaaggtctc gggcaagcgc
     2041 gcccgccgca caacaaaccg aggtgagctt cgctctaggc ggggcgggaa catcaggtgg
     2101 atctgatcaa gaactccgta ctgctcgtgg acgacgagcc gcaagtgctc gtcgcgctcg
     2161 aggatctgtt gagcgaggaa ttcacggtct tcaaggcgca cacgccggag caggcgctcg
     2221 agctcgtcga gagcacgcgc gacctcgcgg tggtgctcac cgatcaacgc atgcccggca
     2281 tgaccgggga cgagctcctc acgcgcgtgc accgcacctc cgaagcgacg cgcatgctcg
     2341 tgacgggctt cgcggatctc gcagcggtca ttcgcgccgt gaacgacgga cgtattttcg
     2401 cctacgtcac caaaccgtgg aatccatcgg agctccaaat catggtccgg aaggcggtcg
     2461 aacactttcg actcgcccag gagctcgcgc acgaacgcac cctgctccac gacttgatgg
     2521 acaacacgcc cgacggcatc tacttcaaag acagacagct gcgctttttg cgcactaatc
     2581 gggccttcgc gcgcacactg aacggcacga gctccgcgga gctcgaaggc aagcgcttgc
     2641 tcgaagtctt gccggcgtcg cacgaagcga tgcgggcgga agcggaagat cagcgcgtgc
     2701 tcggcgaagg cctgcccgtg caggacgtcg tgcacgagta caaacagggc gagacgacgc
     2761 gctggatttc ggagaccaaa gcgccgatcc acacgccgac cggcgaaatc atcggcctcg
     2821 taggtatcgc gcgcgacgtg agcgaacgcg tgctcgccga aacggctctg cgccgcgccg
     2881 aagaacagct gctccaatcg cagaaaatgg aagccatcgg gcagctcgcg ggcggcgtgg
     2941 cgcacgattt caacaacgtg ctctcggtga tcctcggcta cggcgagctc ttgctcgagg
     3001 aaattccgaa ggacaacccg aatcacgccg acatcgcggt catggtcggc gccgcccagc
     3061 gcgcggccgc actcacccgg cagctcctgg cgttcagccg ccggcgcgtc gtgcagccgg
     3121 acatcgtcga tctcaacacc atcgtgtggg gcctcgacaa gatgctccgg cgcatcatcg
     3181 gcgaggacat cgatttgcgc acgacgctcg cctcgagtcc cgcgacgctg cgcgccgatc
     3241 cgagccaact cgagcagatc gtgatgaatc tcacggtcaa cgcgcgcgac gccatgccca
     3301 agggcgggca gctgcgcatt cagaccgaga ccgtgacgct ggacgagcgc tacgcgtccg
     3361 agcacgtcgg ggtgaagccg ggcgtctatg tgctcttgcg tgtcgcggat acgggggtcg
     3421 gcatggacgc cgcgacgcag aagcgcgtgt tcgagccgtt cttcacgacc aaggaagtgg
     3481 gccgcggcac ggggctcggg ctttcgaccg tgtacgggat cgtgcagcag tgcggcgggc
     3541 acatcgtgct cgagagc
//
LOCUS       DATIML010001308         2068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5764367, whole genome shotgun sequence.
ACCESSION   DATIML010001308 DATIML010000000
VERSION     DATIML010001308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5764367"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..874)
                     /gene="maiA"
                     /locus_tag="VLJ38_22510"
     CDS             complement(230..874)
                     /gene="maiA"
                     /locus_tag="VLJ38_22510"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HSU42379.1"
                     /translation="MILYNYFRSSASFRVRIALNLKSLTYEYRAVHLSRHGGEQLTPE
                     YRALNPQSLVPVLEHEDRRFTQSLAILEYLDELQPTPPLLPRPSEERARVRALCLVVA
                     CEIHPLNNLRVLNYVTGTLGASAEAKAEWYRHWAALGLETLEAEIADSPYTGTFCHGD
                     TPGMADCCLVPQLFNARRFDCDLSLYPRLVEIEKNCLALPAFSAALPERQPDSE"
     gene            complement(914..1603)
                     /locus_tag="VLJ38_22515"
     CDS             complement(914..1603)
                     /locus_tag="VLJ38_22515"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSU42380.1"
                     /translation="MKYAFPPPNVASVAVAGSDLHFPVHRIYCVGRNYAEHAREMGGE
                     PAREAPFFFEKPADAVVPSGATIAYPLATENCHHEIELVVAIGRDGTNVSREAALEHV
                     YGYAVGIDLTRRDLQLKARDSGRPWDAGKAFDESAPISAIRRAVEIGHPSQGSIWLKV
                     NGEPRQSADLTQLIWPVPDIIVHLSRLFALKSGDLIYTGTPAGVGPLVRGDRVEGAVT
                     GVGEISLRIAV"
     gene            complement(1634..>2068)
                     /locus_tag="VLJ38_22520"
     CDS             complement(1634..>2068)
                     /locus_tag="VLJ38_22520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42381.1"
                     /translation="YLSGLGIADVTRVEAVATWNDARSLITAAAWDRRWWDAEQLEKQ
                     RLYARAVAASGESDVLGLLSQTLEQSSAANGPAEAAAARVGCSDAGLFAAALGAANEA
                     LYLGELARLASEPQTHPFRSKQALFAAGRWPLGILGGRYRLF"
BASE COUNT          341 a          665 c          699 g          363 t
ORIGIN      
        1 gaccgtaact agctgtgcca tgtcgactcc tcgacttaac gctgtagaac caccgtctcc
       61 gcgagtactg ccgtcttcgc gagcgctccg cttttgggga cctgccgagc cgccctgcga
      121 cccccttcgt tcagaagaag gttggcgttg gtttcgccag agcactcgcg tggtcgttgg
      181 tctctgttgg cgatcgtgat ctggccctcc aagactctga cctttcggct tactcgctgt
      241 ccggctgccg ctcgggcaac gcggcgctga acgcgggcaa ggcgagacag ttcttttcga
      301 tctcgacgag ccttgggtaa agggacagat cgcagtcgaa acgacgtgcg ttgaagagtt
      361 gcgggaccag gcagcaatcg gccatgcccg gcgtgtcgcc gtggcaaaac gtgcccgtgt
      421 aggggctatc ggcgatttcc gcctcgagcg tctcgagccc caacgcggcc cagtgccgat
      481 accattcggc cttcgcttcg gcgctcgcac cgagcgtgcc cgtcacgtaa ttgagaacgc
      541 gcagattgtt gagcggatgg atctcgcacg cgacgaccag gcagagggca cgcacccggg
      601 cgcgctcctc gctcgggcgc ggcaagagcg gcggcgtcgg ctggagctcg tccaggtatt
      661 ccaggatcgc gagcgattgc gtgaagcgtc tgtcctcgtg ctcgaggacc ggcacgagcg
      721 actgaggatt gagtgctcga tactcgggcg taagctgctc gcccccgtgc cggctcaaat
      781 gcacggcgcg gtattcgtac gtgaggctct tgaggttgag cgcgatacgc acgcgaaaag
      841 acgcagagct acgaaagtaa ttgtaaagta tcatgctggt cctggggcgc gcgggcgtcg
      901 ggagcctcgc gtctcaaacc gcgatgcgga gcgagatctc gcccacgccg gtcaccgcgc
      961 cttcgacgcg atcgccgcgc acgagcgggc cgacgcccgc gggggtgccc gtgtagatca
     1021 aatctcccga tttgagcgcg aacagccggg acaggtggac gatgatatcg ggcaccggcc
     1081 agatgagctg cgtgagatcg gcgctctggc gcggctcgcc gttcaccttg agccagatgc
     1141 tgccctgtga gggatgaccg atttcgacgg cgcgacgaat ggcgctgatc ggcgcggact
     1201 cgtcgaaagc tttgcccgcg tcccagggac gcccgctgtc ccgcgctttg agctggagat
     1261 cgcgccgcgt cagatcgatg ccgacggcat aaccgtagac gtgctcgagc gccgcctcgc
     1321 gcgagacgtt cgtgccgtcc cgaccgatgg cgaccacgag ctcgatttcg tgatggcagt
     1381 tctcggtcgc gagcggatac gcgatggtcg cgccgctcgg cacgacggcg tccgcgggct
     1441 tttcgaagaa gaagggcgct tcccgcgcgg gctcgccgcc catctcgcgt gcgtgctcgg
     1501 cgtagttgcg tcccacacag taaatgcgat ggacgggaaa atggaggtcg ctgcccgcga
     1561 cggcgacact cgcgacattc ggtgggggaa aagcgtattt catcggcggg ctcctcgtcg
     1621 ttgcggctgc tcgtcaaaac aggcgatagc ggccgcccaa gatgccgagc ggccaacggc
     1681 cggcggcgaa caatgcttgc ttcgaacgaa acgggtgcgt ttgcggctca ctcgcgaggc
     1741 gcgcgagctc gccgaggtag agcgcttcgt tcgcggcgcc gagcgccgcc gcgaacaggc
     1801 ctgcatcgct gcagccgacg cgcgccgcgg ccgcttcggc cggcccgttc gctgcgctgc
     1861 tctgctcgag ggtctgcgag agcagcccga gcacgtccga ctcacccgag gcagcgaccg
     1921 cgcgcgcata gagtcgctgt ttttcgagct gttccgcgtc ccaccagcgt cggtcccaag
     1981 ccgcagccgt gatgagcgag cgagcgtcgt tccaagtcgc cacggcctcg acgcgcgtga
     2041 cgtctgcgat gccgaggccg ctcaggta
//
LOCUS       DATIML010001309         5724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4025409, whole genome shotgun sequence.
ACCESSION   DATIML010001309 DATIML010000000
VERSION     DATIML010001309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5724
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4025409"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VLJ38_22525"
     CDS             complement(<1..447)
                     /locus_tag="VLJ38_22525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42382.1"
                     /translation="MPLLCVCVACANSTTLAPSAPMRPPTPTTVTAKEPGGDAADPER
                     AALERLLGEAWGARTDKDEQLLAPMPDRDHWKRTRYFGFDHLVGFRYGNEHRAMVAVR
                     VQDLPPGTPVKSETCMRAFEDWARPQIAGFDVKLHPLPTKVVRWRGQ"
     gene            811..1065
                     /locus_tag="VLJ38_22530"
     CDS             811..1065
                     /locus_tag="VLJ38_22530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42383.1"
                     /translation="MDQSKMKIAYVVTQRGTNKYWTRIGVAFVNRDGSINVKLEAVPV
                     SGEIHVRDYVPRDDREETPTATLLKKTGNGHGEESFSEPA"
     gene            1085..1732
                     /locus_tag="VLJ38_22535"
     CDS             1085..1732
                     /locus_tag="VLJ38_22535"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSU42384.1"
                     /translation="MKLIETESGGAIVAGDRSGGTSSPAVRGEGKTQALVASPSFVQR
                     LRALGGSVWAPLLAKAAGVLAGMLALAAIGASSLARGSGVTLPATSTKPGRAGAAVAS
                     LAAPSLARTHAEGLEAEPSDAGAAPSDGGAEAPKPPSDAVTSDGKIILNLASESDLRH
                     LPGIGAKRAAAILALRAKLGGRFKRLSELLRVKGIGAKGLKKIEPRVVLDAPKPA"
     gene            complement(1753..2421)
                     /gene="hisG"
                     /locus_tag="VLJ38_22540"
     CDS             complement(1753..2421)
                     /gene="hisG"
                     /locus_tag="VLJ38_22540"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HSU42385.1"
                     /translation="MSARSYTSTTAGFTPLTIAVPKGRVTRALAPLFERAGIDPAPLL
                     ADDRRLIRESADHSVRFLLLKPDDVPTYVEYGTADLGVSGRDVLRERRYDLYQPLELD
                     VGRCRMVVAGRPDAIVPAIPRVATKYPRTAAEHFASLGIQAEIIYVQGSVELAPLVGL
                     ADLIVDLVESGATLRDNGLVERETIAQVSSVIVANPSLYKLRHDEIAPLIARLQTAVS
                     VGKR"
     gene            2517..3233
                     /locus_tag="VLJ38_22545"
     CDS             2517..3233
                     /locus_tag="VLJ38_22545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42386.1"
                     /translation="MRYRTGFVVLFAIAGAQACGGVAENDFSTPAGGKSAGGTGATGG
                     AGSGRGGSGAATSSGGSKSSGGSSGSSGTGGSATGGSDSAGGTSGTGGDAAGGASGSA
                     ATGGTGADTTGGSAGMTGGTGGTGGSAGSGMNPDCAALEMDYSMTLQQAQACNPDSGK
                     DQCTAMEKNDLTCPNCSVYVNPDNKAPIMHLAELRQQAGNHCVTPCPAIACVMPGSST
                     CAPVAGSRSAGRCTSQPLPL"
     gene            complement(3258..4529)
                     /gene="murA"
                     /locus_tag="VLJ38_22550"
     CDS             complement(3258..4529)
                     /gene="murA"
                     /locus_tag="VLJ38_22550"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020742157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HSU42387.1"
                     /translation="MDAIRVRGARQLKGNIRVGGAKNAALPILCATLLSDGESLLRNV
                     PGLRDIETTADLLRTLGRELTVDIPEVRVKKTSRPVVPEAPYELVRQMRASVLVLGPL
                     VARYGKAKVSLPGGCQIGARPVDQHLLGLEALGAKIAVEHGFIVAEAPRLRGAEVVFD
                     MPTVTGTENLMMAAALAKGRTTLVNCAREPEVEELGRVLNKMGARVEGAGTSIIHIVG
                     ADELEPFDHAIIADRIEAGTFMAAVGAAGGDVLLEHAPLDDLEPVIVKLRRVGMEIER
                     EGEHARVRRLGRLVATDVATSPHPGFPTDMQAQFMALMCVASGRSVVTENVFENRFMH
                     VPELGRMGAKIEAHNNIAIVEGVPRLSGASVMATDLRASASLVIAGLVADDETIVRRV
                     YHLDRGYEAIEKKLAGAGADVTRIKLESEEA"
     gene            4787..>5724
                     /locus_tag="VLJ38_22555"
     CDS             4787..>5724
                     /locus_tag="VLJ38_22555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42388.1"
                     /translation="MGAFASYAYRPVVVSASSESPGWVAVRNQLAFDLVSSVGLLDRL
                     SLGLALPVIAFQNGEPAPAANGTPKPPETAVGNLAVDGHVTVLEPGSLGGLGLAATVR
                     VAVPTGARHAYIAEDQARTEFRLLGELGVLGSSLRFTVGGRVRPDPETFAGDRFGSDL
                     PWGLGIVVKPQAFGIDREGAYLFVVEGHGAVALTPTFGAKEQTPAALRFAGRRAFGDT
                     HLMLGVEAPLDHAYGVPRVRAIAGFGWAPRVRDADGDGIDDKLDQCPELAEDRDGFED
                     NDGCPDFDNDGDGVPDGDDKCPAALEDPDGFQDEDG"
BASE COUNT          907 a         1934 c         2016 g          867 t
ORIGIN      
        1 ctgcccgcgc cagcgcacga ccttggtcgg caagggatgt aacttcacgt cgaaacccgc
       61 gatctgcggc cgcgcccagt cctcgaacgc gcgcatgcac gtctcgctct tgacgggcgt
      121 accgggcggc aggtcttgca cgcgcacggc aaccatcgcc cgatgttcgt tgccgtagcg
      181 aaagccgacg aggtgatcga aaccgaagta gcgcgtgcgc ttccagtggt cacggtccgg
      241 catgggagcg agcagctgct cgtctttgtc cgtacgcgca ccccaggctt ccccgagcag
      301 ccgctcgagc gcggcacgct ccggatccgc ggcatcgccg cccggttcct tcgccgtcac
      361 ggtcgtgggc gtcggcgggc gcatcggtgc actcggcgcg agggtcgtgc tgttcgcgca
      421 agccacgcac acgcagagaa ggggcacggc tcgagacagc tcaatcacgg cgaccatggc
      481 tcgtctccgt cttacggagg gacgcctgag tttgaccctt tctggcccag attccagccg
      541 cggcgaagga gcgcctcgcc gattcagcgg ccgctcgcgg ctttatgtct cgaatctcgc
      601 gggtacgcgc atgtcttacc cgtctgcgtc cctgcccttc ggcggcgtgc cgactggcgt
      661 gcgctggcga gccgcccggc gccagcgcga gctcgcgggt gcgcgcgcgg ttttgctcgc
      721 tggttctcga ggctcgacgc gtggcacgcc gcgtgaagag gggctgggcg tgcgctcgca
      781 aggagcgaga gcacgtgcag gagaatcagc atggatcaat cgaagatgaa gattgcgtac
      841 gtcgtgacgc agcggggtac gaacaagtat tggacgcgca tcggcgtcgc gttcgtcaac
      901 cgcgacggct cgatcaacgt gaagctcgag gcagtacccg tcagcggtga gattcacgtt
      961 cgggactacg tcccgcgtga cgaccgcgaa gagacgccga cggcgacgtt gctcaagaag
     1021 accggcaacg gccacgggga agagagcttt tcggagccgg cctgagcgag aaaggagcgc
     1081 gaagatgaaa ctcatcgaga ccgagtccgg cggagcgatc gttgccggcg accgatcggg
     1141 agggacctct tcgcccgcgg tgcgcggcga gggtaagact caagccctcg tcgcgtcacc
     1201 gtcgttcgtg cagcgcttgc gcgcgctcgg cggcagcgtg tgggcgcccc tgctcgccaa
     1261 agccgcgggc gtgctcgcag ggatgctcgc gctggccgcc atcggcgctt cctcgctcgc
     1321 gcggggttcg ggcgtgacgc tgccggccac ctccaccaaa ccggggcggg caggcgcggc
     1381 cgtagcgtcg ctcgccgcgc cgagtctcgc tcgaacgcac gcggaagggc tggaagcgga
     1441 gccgagcgac gccggagccg caccgagcga cggcggcgcc gaggcgccga aaccaccgag
     1501 cgacgccgtc acctccgacg gcaagatcat cctgaacctc gcgagcgaaa gcgacttacg
     1561 gcacctgccc ggcatcggtg ccaagcgcgc cgccgcgatc ttggcgctca gagcgaagct
     1621 cggcgggcgc ttcaagcgcc tgagcgagct cttgcgcgtc aaaggcatcg gagcgaaggg
     1681 actcaagaag atcgagccgc gcgtggtgct cgacgcgccg aagcctgcgt gacgccgttc
     1741 cccgagtcga gctcagcgtt tgcccaccga gacggcggtc tgtaggcgcg cgatgagcgg
     1801 cgcgatttcg tcgtgacgga gtttgtagag cgaggggttg gcgacgatga cgctcgagac
     1861 ctgcgcgatc gtctcgcgct cgacgagacc gttgtcgcgt agcgtcgctc ccgactcgac
     1921 gagatcgacg atgagatcgg cgagcccgac gagcggcgcg agctcgaccg agccctgaac
     1981 gtagatgatt tcggcctgga tcccgaggct cgcgaagtgc tccgccgcgg tgcgcgggta
     2041 tttggtcgcg acgcgcggga tcgccggcac gatcgcgtcc ggacggcccg cgacgaccat
     2101 gcgacagcga cctacatcga gctcgagcgg ctgataaaga tcgtagcgac gctcgcggag
     2161 cacgtcgcga ccgctcacgc cgagatcggc ggtgccgtat tcgacgtagg tcgggacgtc
     2221 atcgggcttg agcagcagga atctgacgct gtgatcggcg ctttcacgaa tcaggcgacg
     2281 atcgtcggcg aggagcggcg ccggatcgat gccggcgcgt tcgaagagcg gcgcgagcgc
     2341 gcgcgtcacg cgacctttgg gaacggcgat cgtgagcggc gtaaaaccgg cggtggtcga
     2401 tgtgtaggag cgagcggaca taggaaggcc gcggagcgta gtctcgagtc cgagcgagtg
     2461 ctatcttggt gaagctcggc aatctttctc catcccgccg gcttcaggag agttccatgc
     2521 gttatcggac cggattcgtg gtcctgtttg cgatcgcggg ggcacaggct tgcggtggcg
     2581 tcgcggagaa cgatttttcc acgcccgcgg gcggcaaaag cgcgggcggc acgggcgcga
     2641 ccggtggagc gggcagcggc cgcggcggta gcggcgccgc gacgagcagc ggcggctcga
     2701 agagctccgg tgggtccagc ggttcgagcg gaaccggcgg cagcgcgacg ggcggttcag
     2761 acagtgccgg cggcacgagc ggcacgggcg gcgatgccgc gggcggcgcg agcggctccg
     2821 cagccaccgg tggaaccggc gcggacacca cgggcggcag tgcaggcatg acgggcggca
     2881 cgggcggcac gggcggcagc gccggctccg gcatgaaccc cgactgcgcg gcgctcgaga
     2941 tggactactc gatgacgctc cagcaagccc aggcgtgtaa tccggactcc ggcaaagatc
     3001 agtgcaccgc catggagaag aacgatctca cctgcccgaa ctgcagcgtg tacgtgaatc
     3061 ccgacaacaa ggcgcccatc atgcatctcg ccgagctccg ccagcaggcg gggaaccact
     3121 gcgtgacgcc gtgtcccgcc atcgcttgcg tcatgccggg aagctccacc tgcgcgccgg
     3181 tcgcgggcag caggagcgcg ggccgctgca cgagtcaacc gctcccgctc tgatcatcgc
     3241 gcagcgctcg cgcgtgctta cgcttcttcg ctctcgagct tgatgcgtgt cacgtcggcg
     3301 cctgcgcccg ccaatttctt ctcgatggct tcgtagccgc ggtcgaggtg atacacgcgc
     3361 cgcacgatgg tctcgtcgtc ggccacgagc cccgcgatca cgagcgaggc gctcgcgcgc
     3421 agatcggtcg ccatcacgga cgcccccgag aggcgcggca cgccttccac gatggcgatg
     3481 ttgttgtgcg cttcgatttt tgcgcccatg cgcccgagct cgggcacgtg catgaagcga
     3541 ttttcgaaca cgttctcggt gacgacggag cggccggacg cgacgcacat gagcgccatg
     3601 aattgcgcct gcatgtccgt cggaaagccc ggatgcggtg aggtcgcgac gtcggtcgcg
     3661 accaagcggc cgaggcgacg cacgcgggcg tgctctcctt cgcgctcgat ctccatgccc
     3721 acgcggcgga gcttcacgat cacgggctcg agatcgtcga gcggcgcgtg ctcgagcagc
     3781 acgtcgccgc cggccgcccc gaccgccgcc atgaacgtgc cggcttcgat gcgatcggcg
     3841 atgatggcgt gatcgaacgg ctcgagctcg tcggcgccca cgatgtgaat gatcgaggtg
     3901 ccggcgcctt cgacgcgcgc gcccatcttg ttcagtacgc gtccgagctc ctcgacttcg
     3961 ggttcgcgcg cgcagttgac gagcgtcgtg cgacccttgg cgagcgccgc cgccatcatc
     4021 aggttctcgg tgcccgtgac cgtcggcatg tcgaacacga cttcggcacc gcgcaagcgc
     4081 ggcgcctcgg ccacgatgaa gccgtgctcg accgcgattt tcgcgccgag cgcctcgagc
     4141 ccgagcagat gctgatcgac cgggcgggcg ccgatttggc agccgccggg cagcgatacc
     4201 ttggctttgc cgtagcgcgc gacgagcggg cccaagacca gcacgctcgc gcgcatctgg
     4261 cgcacgagct cgtacggcgc ctcgggcacg accggacgcg aagttttttt gacgcgaacc
     4321 tcggggatgt caaccgtcag ctcgcggccg agcgtccgga gcaggtcagc cgtggtctcg
     4381 atgtcacgca ggcccgggac gttccgcagc aggctctcgc cgtcggaaag gagggtcgcg
     4441 cacaagatgg gcaaagccgc attcttcgcg ccgccgacgc ggatattgcc tttgagctgc
     4501 cgcgcgccgc gcacgcgaat cgcatccatg gctcgggacc atacatcgag taacctacgc
     4561 aggcgaacaa gcggacggcc ggaggaatcg ccccatcatc accccgcacg gtaggtccgc
     4621 gcccagcatc caccggctgc tttttgcggc agcattcgcc ctcgcgcgca ccgccagcgc
     4681 cgagccggcg ccgtccctcg acttacgtgg cttcgaggcc acgacccacc ccgaaggact
     4741 cacgcgtgtc gagccgacct cgacgcccgc acgcggggag tggaacgtgg gcgccttcgc
     4801 gtcctacgcc tatcggcccg tcgtcgtctc cgcttcgagc gagtcccccg gttgggtcgc
     4861 cgtcaggaac cagctcgcct tcgatttggt ctcgagcgtt gggctcctcg accggctctc
     4921 gctcggcctg gcgctgccgg tgattgcctt tcaaaacggc gagcctgcgc cggcggcgaa
     4981 cggcacgccg aagccgcccg agaccgcagt cggtaacctc gcggtcgacg ggcacgtcac
     5041 ggtcctcgag ccgggctcgt tgggagggct cgggcttgcg gcgacagtcc gcgtggcggt
     5101 gccgacgggc gctcggcacg cgtacatcgc cgaggatcag gcgcgcacgg agtttcggct
     5161 gctcggtgag ctcggcgtgc tcggctcctc gctccggttc accgtgggcg gccgcgtccg
     5221 ccccgacccg gaaacgttcg ccggcgaccg cttcggcagc gatttgccct gggggctcgg
     5281 catcgtggtg aagccgcaag cgttcgggat cgaccgcgaa ggcgcgtatc ttttcgtcgt
     5341 cgagggccac ggcgccgtcg cgctcacgcc gacgttcggc gcgaaagagc agacgcccgc
     5401 ggcgctgcgc ttcgccggcc ggcgggcgtt cggcgacacg cacctcatgc tcggcgtgga
     5461 ggcgccgctc gaccatgcct acggcgtgcc acgcgtgcgc gcgatcgccg gcttcggctg
     5521 ggcaccgcgc gtgcgcgacg ccgacggcga cggcatcgac gacaagctcg atcagtgccc
     5581 ggagctcgcc gaggaccgcg acggcttcga ggacaacgac ggttgccccg acttcgacaa
     5641 cgacggcgac ggcgtccccg acggcgacga caaatgtccg gccgcgctcg aggacccgga
     5701 cggctttcag gacgaggacg gctg
//
LOCUS       DATIML010001310         1640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4899678, whole genome shotgun sequence.
ACCESSION   DATIML010001310 DATIML010000000
VERSION     DATIML010001310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4899678"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VLJ38_22560"
     CDS             <1..292
                     /locus_tag="VLJ38_22560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42389.1"
                     /translation="RLLASMAQALLDQRRVRLEYGPEVIEHLLDRGGYDPTLGARPMK
                     RTIARLVEAPLAERLLRGELPRESIALLEIHDGALDFDVVEGAATLEAGAAE"
     gene            300..974
                     /locus_tag="VLJ38_22565"
     CDS             300..974
                     /locus_tag="VLJ38_22565"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HSU42390.1"
                     /translation="MRRARACPAIALLSLAVAAGCHKKKPDNELPTVRGSGVGSSTSR
                     QLAPFSRIDVHGVLELTVNVGKNEPLEIRGEDNLFEHLPSTVVGGELALRPDAVLKAT
                     QPLRLVVGTERLDAVSASIGVKMTVHGVKADTFTLRAAGASRVVMDGSASTLSASARS
                     VAQLDLHAFQAGNVTASAQDFSRVYLGYVEKLDATQKGNGVISYRGTPDVMRHAERPA
                     NVGPSL"
     gene            complement(1058..1402)
                     /locus_tag="VLJ38_22570"
     CDS             complement(1058..1402)
                     /locus_tag="VLJ38_22570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42391.1"
                     /translation="MDLRKMMVVCAVALSGLAVGCKSDCESVCSDEKDCAGADSSVDC
                     SKSCKTAEDAADQLGCKSQFEDEFSCLSDVDDVCKADPTKTCVNEQKAMDNCILAYCN
                     AHSGGSDCSATP"
BASE COUNT          292 a          569 c          500 g          279 t
ORIGIN      
        1 ccgcctgctc gcgtcgatgg cgcaggcgct gctcgaccag cgccgcgtgc gcctcgagta
       61 cgggcccgaa gtcatcgagc acctgctcga tcgcggcggc tacgacccga cgctcggcgc
      121 gcggcccatg aagcgcacca tcgcgcggct cgtcgaagcg ccgctcgccg agcggctcct
      181 gcgcggcgaa ctcccccgcg aaagcatcgc gctgctcgag atccacgacg gcgcgctcga
      241 cttcgacgtc gtcgaaggcg ccgcgacgct cgaggcgggc gcggcggagt agcgctgcga
      301 tgcgtcgcgc ccgggcgtgc cccgcaatcg ctctgctttc gctcgccgtg gcggcgggct
      361 gtcacaagaa gaagccggac aacgagctac ccaccgtgcg cggtagcggc gtcggctcat
      421 cgacctcgcg gcagctcgcg ccattttcgc gcatcgacgt gcacggcgtg ttggagctca
      481 cggtcaacgt cggcaagaac gagccgctcg aaatccgcgg cgaagacaac ctgttcgagc
      541 acctcccgtc cacggtcgtc ggcggcgagc tcgcgctcag acccgacgcg gtactcaagg
      601 ctacgcagcc gctccgccta gtggtcggca ccgaacggct cgacgccgtc tccgcgtcga
      661 tcggcgtgaa aatgacggtc cacggcgtca aagccgacac gttcacgctg cgcgccgccg
      721 gcgcttcgcg cgtcgtgatg gacgggtccg cgagcaccct gtccgccagc gcgcgcagcg
      781 tcgcccagct cgatctccac gcgtttcagg ccggcaacgt cacggcgtcc gcgcaagact
      841 tttcgcgcgt gtacctcggt tacgtcgaga agctcgacgc aacgcaaaag ggcaacggcg
      901 tcatcagcta ccgcggcaca cccgacgtga tgcgccacgc cgagcgcccg gccaacgtcg
      961 gaccgtcgct gtaacggtgc gcggcgtttc aggaactcaa aaaaaagggg cccgcaagtg
     1021 cgagccccac accaacatta ggaggctaat cgtacggtca gggggtcgcg ctgcagtcgc
     1081 tgccacccga atgagcgttg cagtacgcga gaatgcagtt gtccattgcc ttctgctcgt
     1141 tcacgcacgt cttcgtggga tcggctttgc agacgtcgtc gacgtcggac aggcagctaa
     1201 actcgtcttc gaactggctc ttgcagccga gctggtcggc ggcgtcttcc gccgtcttgc
     1261 agctcttgct gcagtcaacc gagctgtcgg caccagcgca atccttttcg tcactacaga
     1321 ccgactcgca atcgctctta caccccacgg caagaccgct gagcgcgacc gcgcacacca
     1381 ccatcatctt cctaagatcc atgtcatcct cttcgagttg tgacggaagc gaacagcact
     1441 cccgacggac gtcaaattac agtccactcc gcgtcgctct gtccagtaaa taggggatga
     1501 gccggacggc cgtgttcggt gttgctcgct tgcaacactt cgcgacaatt cgcgatattt
     1561 cgccgattgc cgcggcagtg acgtaattcg agcgcgatta ttcaaagcac acacattgtg
     1621 tgctttgggc accgaggctg
//
LOCUS       DATIML010001311         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_567032, whole genome shotgun sequence.
ACCESSION   DATIML010001311 DATIML010000000
VERSION     DATIML010001311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_567032"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VLJ38_22575"
     CDS             <1..432
                     /locus_tag="VLJ38_22575"
                     /inference="COORDINATES: protein motif:HMM:NF012754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42392.1"
                     /translation="NLIGGTDSPSTYDDANALNVTWHHDYWADRVVERQPRVRFGKNH
                     LFNNLWASSGDSYCIRAGKSARILVEHSVFQGVKDPYQFNNSTDQGTANIAENDNDTS
                     TATGKEETGGGGPAIGTLPYAYTADARSGVAAAVQSGAGPK"
     gene            complement(439..>1600)
                     /locus_tag="VLJ38_22580"
     CDS             complement(439..>1600)
                     /locus_tag="VLJ38_22580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42393.1"
                     /translation="FGDHTLWRLLVEAPYQGRCSKVITRAIVERSLALGTRFMLVHQR
                     PEGNFDYEYDWRERTYSDDDNEVRQAGALWGLALIEQARPSRELEAAIEKGLAFFEGH
                     AVENERGERCVAYPAKAEPGIGTVALMALTYVDYLRANGTAIPAERRAEHERRLDAYL
                     KELIAAINPDGLWFGAYDPHTCAPHGAASPYSDGEALLALVKAVKYAGRIKALPSALS
                     AAEAGHRLNVKEALAADPDSDTMKAYYQWSTMAFYELATSGLPDTARFGDYVLAQSDW
                     EIDVHQTLTRQRNTGYAYEGLIPAYDWARRRGDTTRTAKYACVIDLALERLISWQVGG
                     PLSTSYTSAVDANDTDAIGGVQNERDEPALRIDVTQHQTHALIYARDFIYTQ"
BASE COUNT          262 a          513 c          539 g          286 t
ORIGIN      
        1 aacctcatcg gcggcaccga cagtccgagc acctacgacg acgccaacgc gctcaacgtc
       61 acctggcatc acgactactg ggccgatcgc gtcgtcgagc gccaaccgcg cgtgcgcttc
      121 ggcaaaaatc acctcttcaa caacctgtgg gcctcgagcg gcgacagtta ctgcatccgc
      181 gccggcaaga gcgcgcgcat cctcgtcgaa cacagtgtgt ttcaaggcgt gaaggatccg
      241 taccaattca ataactcgac cgaccaaggc accgccaaca tcgcggagaa cgacaacgac
      301 acctcgacgg cgacgggcaa agaggagacg ggcggcggtg gacctgcgat cggcaccctg
      361 ccgtatgcgt acacggcgga tgcgcgctcg ggcgtggcgg cggccgtgca gagcggcgcg
      421 gggccgaagt aagacgcgtt attgcgtgta gatgaagtcg cgcgcgtaaa tgagggcgtg
      481 cgtttggtgc tgggtcacgt cgatgcgcag cgccggttcg tcccgttcgt tttgcacccc
      541 gccgatggcg tcggtgtcgt tcgcgtccac ggcgctcgtg tagctggtcg agagcgggcc
      601 gccgacttgc caggaaatca gccgctcgag cgcgagatcg atgacgcagg cgtatttggc
      661 ggtgcgcgtg gtgtcgccgc gacggcgcgc ccagtcgtag gcggggatga gtccttcgta
      721 cgcgtagccg gtgttgcgct ggcgcgtgag ggtttggtgc acgtcgattt cccagtcgga
      781 ctgcgcgagc acgtagtcac cgaagcgcgc cgtgtcgggc aagccgctcg tcgcgagctc
      841 gtagaaggcc atggtgctcc actggtagta cgccttcatg gtgtcggagt cggggtccgc
      901 tgcgagcgct tctttgacgt tcaagcggtg acccgcctcc gcggcgctga gcgcgctcgg
      961 caacgccttg attctgccgg cgtacttcac ggctttcacg agggcgagca gcgcctcccc
     1021 gtcggagtac ggggaagcag cgccgtgcgg cgcgcaggtg tgcgggtcgt aggcgccgaa
     1081 ccagagtccg tcggggttga tcgccgcgat cagttccttc aaataggcgt ccaggcgccg
     1141 ctcgtgctcg gcgcgccgct cggcagggat tgcggtgccg ttcgcgcgta ggtagtcgac
     1201 gtacgtgagc gccatcagcg ccaccgtgcc gatgccgggc tccgctttgg ccggataagc
     1261 gacgcaacgt tcgccgcgtt cgttttccac ggcatgcccc tcgaagaacg cgagcccctt
     1321 ctcgatcgct gcttcgagct cgcgactcgg ccgcgcctgc tcgatgagcg cgagccccca
     1381 cagcgcgccc gcttgacgca cctcgttatc gtcgtccgag taagtccgtt cgcgccagtc
     1441 gtattcgtag tcgaaatttc cttcaggccg ctgatgtacg agcatgaagc gcgttccgag
     1501 cgcgagtgac cgctcgacga tcgcgcgggt gatcaccttg ctgcagcgtc cctggtacgg
     1561 cgcttcgacc aggagccgcc agagcgtgtg atcgccaaaa
//
LOCUS       DATIML010001312         3351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1434830, whole genome shotgun sequence.
ACCESSION   DATIML010001312 DATIML010000000
VERSION     DATIML010001312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3351
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1434830"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1336)
                     /locus_tag="VLJ38_22585"
     CDS             complement(<1..1336)
                     /locus_tag="VLJ38_22585"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU42394.1"
                     /translation="MTVAVAGGRGLTSAGELVAGKYVVERVLGSGGMGVVVAAVHRQL
                     GTPVAIKFLFPRGAEREREIARSLNEARAAASITSPHVVRVFDVDVRADGVPFIVMEL
                     LAGETLAERLKTGPLGFAQAVDYVVEAAEALGAAHARGVVHRDLKPGNLFLANGGEHD
                     ESVKVLDFGIAKSLELGAPASAGTTGETFVGSPPYMSPEQLTEPNSVDARTDIWSLGA
                     VLYECLTGGSPFTAQGVGEVCARVLQHNPAPIAGSRADVPPGLEAVVQRCLAKPRAQR
                     HASMLELARALEPFGTDRARQALRMLELAAGRRSDQPASRLDPLAADVGPTAPLVSTE
                     TALATRASMGNPAGRGPRWAGAALAVSAVGGSFFVYVASNRHVAAGVSSAARSRSAPS
                     ALATARVVASAPAAHDPPSGASAVPLAASAARGPLALKPGLAARRDAREPRKP"
     gene            complement(1462..2451)
                     /locus_tag="VLJ38_22590"
     CDS             complement(1462..2451)
                     /locus_tag="VLJ38_22590"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSU42395.1"
                     /translation="MAKMDLNQIALFARVVDAGSFTRAAKDLELPISSVSRGVANLER
                     ALGTRLLQRTTRKLHLTDAGKRFYENAHAALDALEQATSSATSASDEASGLVRLTLPS
                     DAGDAFLAQILAEFRQAHPGVELQAHFTNRYVDLVEEGFDLALRAGRLPDSSLVGSKI
                     VESEFALFAAPSYLERRGTPRLWDDLATHDAVVFERMRSWSLEGPRGVETLRPHAVLV
                     VDSMGFLSHAIAAGLGVGLVPLERALSDTYGHDPPTLVRVLPDFVFRGAALSLLWPPS
                     PFVPRRVVLFREHLSKRLRERHLSCSELLGTRGADAPAPPARSTTRHRGRKRR"
     gene            2533..2976
                     /locus_tag="VLJ38_22595"
     CDS             2533..2976
                     /locus_tag="VLJ38_22595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020738484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSU42396.1"
                     /translation="MNWKHHLATGSRLLLGLIFAVFGLNFFLHFLPQPGAPPAAVAFA
                     GALFASGYVFPLIKTIEVVAGVLLLTRTAVPFALVVLAPIIVNIVAFHTLLAPAGLPL
                     ALVVLATELHLAWYHRRAFAPLFARGSQSKADVTARVGRSHPAAA"
     gene            complement(3064..>3351)
                     /locus_tag="VLJ38_22600"
     CDS             complement(3064..>3351)
                     /locus_tag="VLJ38_22600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42397.1"
                     /translation="KQLKAIDSQAPLPQRPSGAGYVRCANAARIIANKLRDNGETPQD
                     LLDIHDFIRVTLKPTPAARPAKASKPPRKKAATSEAPAADVSTDDSPVDAN"
BASE COUNT          496 a         1139 c         1160 g          556 t
ORIGIN      
        1 ccggtttgcg tggctcgcgc gcgtcccggc gcgccgcaag tcccggcttg agcgcgagag
       61 ggcctcgagc cgcgctcgcg gcgagcggca cagcgctcgc gccgctcggc gggtcgtgtg
      121 cggcaggagc gctcgcgacg acgcgggccg tcgcgagcgc cgagggtgca ctgcggctcc
      181 tggcggcgct gctcacgccc gcggccacgt ggcgattgct tgcgacgtaa acgaagaagc
      241 taccgccgac cgcgctgacg gcgagcgctg cgccggccca gcgcgggccg cgccccgctg
      301 ggttacccat cgaggcgcgg gtcgcgagcg ccgtctccgt cgagaccaga ggcgccgtgg
      361 gtcccacatc cgcagcgagc gggtcgagcc gggaggcagg ctgatccgag cgccgtccgg
      421 cggcgagttc gagcattcgc agcgcctgcc ttgcccgatc ggtgccgaac ggttcgaggg
      481 cgcgggcgag ctcgagcatg ctggcatggc gttgtgctct cggcttggcg aggcagcgtt
      541 gaacgaccgc ttcgagtccc ggcgggacgt ccgcgcgcga gcccgcgatg ggtgccggat
      601 tgtgttgcag gacacgcgcg cagacctcgc ccacgccctg cgcagtgaag ggcgagccac
      661 cggtcaaaca ctcgtagagc acggcaccga gcgaccagat gtcggtgcgg gcatcgacgc
      721 tgttcggctc cgtcagttgt tcgggcgaca tgtacggcgg cgagccgacg aacgtttctc
      781 cggtcgtccc ggctgacgct ggcgcgccga gctcgaggct cttggcgatg ccgaagtcga
      841 gcaccttgac gctctcgtcg tgctcgcccc cgttcgccag gaacagattg ccgggcttga
      901 gatcacggtg cacgacgcct cgtgcgtgcg cggcgccgag cgcttccgct gcttcgacga
      961 cgtagtccac ggcctgggcg aagccgagcg gccccgtttt gagccgctcg gcgagggtct
     1021 cgccggcgag cagctccatg acgatgaacg gcacgccgtc ggcgcgcacg tccacgtcga
     1081 aaacccgcac gacgtgcggg ctcgtgatac tcgccgccgc gcgagcctcg ttgagcgagc
     1141 gggcgatctc gcgctcgcgt tcggcgccgc gcggaaacag aaacttgatt gcgacgggcg
     1201 ttccgagctg acggtggacc gctgcgacga ctacccccat gccgccgctg cctagcaccc
     1261 gctcgacgac gtacttaccg gcgaccagct caccggcaga cgtgagccct cggcctcccg
     1321 ctaccgcaac cgtcatcttt gacgcgcgta gcacgttcgc agccggccgg ctactccgtc
     1381 tcgcgccggc gtgagggact cctgcgatca gagacagcgc gccccggata ggctgagctc
     1441 acccgggggt tacagctctc gtcaacggcg cttccgcccg cgatgccgcg tggtggaccg
     1501 cgccggcggc gcaggggcgt ccgcgccgcg tgtgccgagc agttccgaac agctcaggtg
     1561 acgctcgcgc aagcgtttgc tcaggtgttc gcggaagagc acgacgcggc gcgggacgaa
     1621 cggcgagggc ggccacaaga gcgagagtgc ggcaccacga aagacgaagt cgggcaatac
     1681 gcgcacgagc gtcggcggat catggccgta cgtatcggag agcgcgcgtt cgagcggcac
     1741 gagcccgaca cccagtcctg ccgcgatggc atggctcaga aaccccatgg aatctacgac
     1801 caatacggcg tgtggtcgca gcgtttcgac gccgcgcggt ccttcgagcg accagctccg
     1861 catgcgctcg aagacgacgg catcgtgcgt ggcgaggtcg tcccagagac gcggtgtgcc
     1921 gcgccgctcg aggtacgaag gcgcggcgaa cagcgcgaac tccgattcga cgatcttgct
     1981 gccgacgagc gacgaatcag gtagacgccc ggcacgcagc gcgaggtcga agccctcctc
     2041 cacgagatcg acgtagcgat tcgtgaagtg tgcctgcagc tcgacgcccg gatgagcttg
     2101 gcggaactct gcgaggatct gcgcgaggaa cgcatcgccg gcgtcgctcg gtaacgtcag
     2161 ccgcacgagc ccgctcgctt cgtcgctcgc gctcgtggcg gagctcgtcg cctgctcgag
     2221 cgcgtcgagc gccgcgtgcg cgttttcata aaaacgcttg ccggcgtccg tcaggtggag
     2281 cttgcgcgtc gtgcgctgca gcagccgcgt accgagggcg cgttcgaggt tcgcgacacc
     2341 gcggctcacc gacgaaatcg gcagctccag atccttggcg gcgcgcgtga agctgccggc
     2401 gtccaccacg cgcgcgaaca gcgcgatctg gttcaaatcc atttttgcca ttcgcgcaat
     2461 agtttgttgc cagaaacctg actaccgcaa cccgagcaaa aacacagatt acacggacac
     2521 ggaggtttcg ccatgaattg gaagcatcat ctcgccaccg gatcgcgcct gctgctcggg
     2581 ctcatctttg cggtcttcgg cctcaacttc tttctgcatt ttctgccgca accgggtgca
     2641 cctcccgctg cggtcgcgtt cgccggcgcg ctcttcgcgt caggctacgt attcccgctg
     2701 atcaagacga tcgaggtcgt cgcgggcgtg ctcttgctca cgcgcactgc ggtaccgttc
     2761 gcgctcgtcg tgctggcgcc gatcatcgtc aacatcgtcg cgttccacac gctgctcgcc
     2821 ccggccggct tgcccctcgc gctcgtcgtg ctcgccaccg agcttcacct cgcttggtac
     2881 catcgacgcg cgtttgcgcc gctcttcgca cgtggcagcc agtcgaaagc tgacgttact
     2941 gcgcgcgtcg gtcgttcgca cccggccgcc gcgtgagcgc ggcgcttgct gctggctacg
     3001 ccgctgcaag cgcggcgtag ccagtttcgg ctctgaaagc cgaccccgca aggcgcttcg
     3061 ggactagttc gcgtctacgg gcgagtcgtc ggtcgaaaca tcggcagcgg gcgcctcgct
     3121 cgtggcggct ttcttccggg gcggcttgct ggccttggcg gggcgggcag cgggcgtggg
     3181 tttgagcgtg acgcggatga agtcgtgaat gtcgagcaga tcttggggcg tctcgccgtt
     3241 gtccctgagc ttgttcgcga tgatgcgggc ggcgttggcg caacgcacgt agcctgcgcc
     3301 gctcgggcgt tgcgggagcg gggcctggga gtcgatggcc ttcagttgct t
//
LOCUS       DATIML010001313         1772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2588035, whole genome shotgun sequence.
ACCESSION   DATIML010001313 DATIML010000000
VERSION     DATIML010001313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2588035"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VLJ38_22605"
     CDS             <1..224
                     /locus_tag="VLJ38_22605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42398.1"
                     /translation="KLRASFAVNIGGDRAVAGFTQRKASGNAVFDTRAQSTMQGTVGA
                     ELPPPPPLYPDILGSSISVTFAGRDDECK"
     gene            221..1561
                     /locus_tag="VLJ38_22610"
     CDS             221..1561
                     /locus_tag="VLJ38_22610"
                     /inference="COORDINATES: protein motif:HMM:NF015980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tolB protein"
                     /protein_id="HSU42399.1"
                     /translation="MTKLIAWALALSVALTALPAAAQTPPDAAPAAQAAPAGETALGE
                     FIVTGHKEEKLPRIAILPSLSADLEDVIVRSVVRRDIELTGMFDIISDSKAPAGLYSF
                     DDPVDVPAWQNLGAESIVKVAARPQAGNKVQVLGLAYFLNVGKDPVYQKKIVVDKADV
                     RVTAHRITDALLGALTGRPGGFASQLAFAARWTKNQRIFRLDADGQGLEPLTDAAEFA
                     VAPTWGPNGVLFYASSRDYAPLKLFSMSGKTVTPVKLPYTTSVYGVSFNKDFSKMAVA
                     VAEDGKSSIYVGLADGTGMTKASGSELATRPVFSPTGKLAWIGGDPTHGSQRVYIDGK
                     AVSPSGFGASGPAFCDTEDGVRLVYSVSVGNDNRDLVMSDDQGHGIVRLTQGQGSNTY
                     PACSPDGRLLAFFSTRKGQPGIYMMSLKRFTTQLLTSKLGESLHWAALPPPPAQ"
BASE COUNT          293 a          605 c          578 g          296 t
ORIGIN      
        1 cgaagctccg cgcgtccttt gccgtgaata tcggcggcga ccgcgccgtc gcagggttta
       61 cgcaacgcaa ggccagcggc aacgcggttt tcgacacgcg cgcgcaatcg acgatgcaag
      121 gcaccgtcgg cgccgagctg ccgcccccgc cgccgcttta ccccgacatc ctcgggtcct
      181 cgatttcggt cacctttgcg ggaagagacg acgaatgcaa atgacgaagc ttatcgcttg
      241 ggcgctcgct ctctcggtcg cgctcacggc gctgccggca gctgcgcaga cgcccccgga
      301 cgctgcgccc gcagcgcaag ccgcgccggc gggcgagacc gcgctcggtg agttcatcgt
      361 cacgggccac aaggaagaaa agctccctcg catcgcgatt ttgccgtcgc tttccgctga
      421 tctcgaggac gtgatcgtgc gctccgtcgt gcggcgcgac atcgagctca cgggcatgtt
      481 cgacatcatc tcggactcga aggcgcccgc cggcctctac tccttcgacg atccggtgga
      541 cgtgcccgct tggcagaacc tcggcgccga atcgatcgtg aaggtcgccg cgcgcccgca
      601 agcgggcaac aaggtccagg tgctgggcct tgcgtacttt ttgaacgtcg gcaaagaccc
      661 cgtctaccag aagaagatcg tagtcgataa agccgacgtg cgcgtgacgg cccatcgcat
      721 caccgacgcg ctgctcggtg cgctcacggg gcgacccggc ggctttgcga gccagcttgc
      781 gttcgcggcg cgctggacga agaaccagcg catctttcgg ctcgacgccg acgggcaagg
      841 gctcgagccg ctgacggacg cggcggagtt cgcggttgcg ccgacgtggg ggccgaacgg
      901 cgtgctcttt tatgcgagca gccgggatta cgcgccgctc aagctgtttt cgatgtcggg
      961 taagacggtc acgcccgtga agctgccgta cacgacgtcc gtgtacgggg tgtcgttcaa
     1021 caaggacttc tccaagatgg ccgtcgccgt ggccgaggac ggcaagagct cgatttacgt
     1081 ggggctcgcc gacggcaccg gcatgacgaa ggcgtccggc agcgagctcg cgacgcgccc
     1141 cgtgttcagc cccacgggca agctcgcgtg gatcggcggc gatccgacgc acggctcgca
     1201 acgcgtgtac atcgacggca aggcggtttc gccctccggc ttcggcgcct cgggtcccgc
     1261 gttttgcgac accgaggacg gcgtccgcct cgtctactcg gtctccgtcg gcaacgacaa
     1321 ccgcgatctg gtcatgtccg acgaccaggg tcacggcatc gtccgcctca cgcaaggtca
     1381 gggctcgaac acgtaccccg cctgcagtcc cgatggacgc ctgctcgcgt ttttctcgac
     1441 gcggaagggt cagccgggga tttacatgat gtcgctcaag cgcttcacga cgcagctctt
     1501 gacctcgaaa ttgggagagt cgctgcactg ggcggccctg ccgccgccgc ctgcgcaata
     1561 aacgccgcgc acgctcgggt ttttgggcta gatcccgcgc gtgtcacacg cgcgcgacgg
     1621 ttacgcgaat gccggcgtcg attacggcgt catcgacccc ggaaaactcc tggcgcaacg
     1681 caccgccgcg gacacggcga gcgagctctc ggcgcgcggc gcgcacgagc tcgtcgaaag
     1741 tcgcggcgaa agcgcctacg tcgtcgatct cg
//
LOCUS       DATIML010001314         2479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2588598, whole genome shotgun sequence.
ACCESSION   DATIML010001314 DATIML010000000
VERSION     DATIML010001314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2588598"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VLJ38_22615"
     CDS             complement(<1..646)
                     /locus_tag="VLJ38_22615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020737083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSU42400.1"
                     /translation="MSTPAELLVLRGARALDPARALDAVVDVVVERGRITRLGPNAGV
                     EAARAERAQVIDAAGQWVLPAFVDLHAHLREPGQEYKEDIASGLSAAAAGGYAHVCAM
                     PNTQPVNDTRAVTEMMVHRAAEHGGPALHPIGAITKRQEGKELTEMAELRAAGAVAVS
                     DDGVCVMSSAVMRRALEYAKNFDLPVIQHAEDHQLTQGADIHEGEISARLGLRGW"
     gene            1318..>2479
                     /locus_tag="VLJ38_22620"
     CDS             1318..>2479
                     /locus_tag="VLJ38_22620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42401.1"
                     /translation="MPAHATEALQRAQPGTHAEMAKEMLAVFERELGTHPKPHRAGRL
                     HYECARLYEWPLADTARAADHYQKAHALVLDHLPSVRGARRTLVAAQRHAQALPFFDA
                     EIRLTADSQRKAVVYYEKGLVLEDALNQKPQAREAFEAGLELDPMNPSLLKAVERAEI
                     AAKAWDSLEKTYARAANAVTQDARLKAALIAERARVIEGRKRDTRGAMELYRLALETD
                     PRTTGAIHALKRLCFAEERFGDLVSVLAHEAELVSGPEARSLSFYRAGRVLSDRLGAL
                     DKAAEAFESAAREAPRDRLVLEELARAHELAKRWPELASVLERLVALAPTPAEKVGFF
                     HQLGELAEERLGEEELAITWFERAREADPLYLPAIQALSKLYTRRENWTALLA"
BASE COUNT          363 a          916 c          851 g          349 t
ORIGIN      
        1 gccagccgcg cagcccgagc cgcgcggaaa tctcgccctc gtggatgtcg gcgccctggg
       61 tgagctggtg atcctcggcg tgctgaatca cgggtaaatc gaagttcttc gcgtactcga
      121 gcgcccgccg catgacggcg ctcgacatca cgcacacccc gtcgtcgctc acggccaccg
      181 cgcccgccgc gcgcagttcc gccatctcgg tgagctcttt gccctcctgg cgcttggtga
      241 tggcgccgat cggatgcagc gcggggccgc cgtgctcggc ggctcgatgc accatcattt
      301 ccgtgacggc gcgcgtgtcg ttcacgggtt gcgtgttcgg catcgcgcac acgtgcgcgt
      361 agccgccggc ggccgcggcg gagagccccg aggcgatgtc ctctttgtat tcttgaccgg
      421 gctcgcgcag gtgcgcgtgg agatcgacga aggccggcag cacccactgt ccggcggcat
      481 cgatgacctg cgcgcgttcg gcgcgtgcgg cttcgacccc cgcgttcggt ccgagtcgcg
      541 tgatgcgacc gcgttccacg acgacatcga ccaccgcgtc gagagcgcgc gccggatcca
      601 gggcacgtgc cccgcggagg accaggagct cggccggggt gctcataggg cgccaccgca
      661 tagcatgagg tccggcgctg ggcgcgcgga caggcgggat tttcgccctc aggctcgcgc
      721 gccgcacgtt tcaggcttgg tgtaagctca tggaccatgg ccgaggatgc gaatcagtcg
      781 aagaagcctt cgccgccgag gccggcttcg ggacgtacgt ccgtgcctcc ctcggtaccg
      841 ccgcgtccgc gcgagagtcg gccgggcgcg ccgtccagcg gcgcgagtgg ctcgaaggct
      901 cccaaaggcg cgccctcgca gacgccgtca acgcccaaag cggcgccggt gccgccgtcg
      961 tcaccccaag cgagtgataa cgcctcgggc ggtcccgtcc ggagtctgcc gccgccacct
     1021 cccgttcgcc agcgcccgct ctcggcgcca cctggcaagc gcagccgtcc ggctcctccg
     1081 cgaccgccat cgcgccctcc ggcggctgcg gcgagcgacc cggcggctgc ggtcgcgccg
     1141 aaactccccg cgccgcccca gttcgttgcg ccgacgaacg cgccgacgcc cgagacacgc
     1201 tctcagcgcc cgaagccgcc gccccctcaa cgttcgatgc cggcgcccac gccgggcgcg
     1261 ccgcccgtga cagcgactcc cgagccgcgc ctctcgtccg caccgcgtgc cgtagaaatg
     1321 cccgcccacg cgaccgaggc gctccagcgc gcgcagcccg gaacgcacgc ggaaatggca
     1381 aaagagatgc tcgcggtgtt cgagcgcgag ctcggcacgc acccgaagcc tcatcgcgcc
     1441 ggtcgcctgc attacgagtg cgcccggctg tacgagtggc cgctcgccga cacggcgcgt
     1501 gcggccgatc actaccagaa agcccacgcg ctcgtgctcg accacctgcc gtcggtgcgt
     1561 ggcgcgcgcc ggacgctcgt cgccgcgcag cgccacgccc aggcgctccc gttcttcgac
     1621 gccgaaatcc ggctcacggc cgattcgcag cgcaaagccg tcgtctacta cgagaagggg
     1681 ctcgtgctcg aagacgcgct gaatcagaag ccgcaggcgc gcgaggcgtt cgaggcgggg
     1741 ctcgagctcg atcccatgaa cccgtcgctg ctcaaagccg tcgagcgcgc cgagatcgcc
     1801 gccaaggcgt gggatagcct ggagaagacg tacgcgcgag ccgcgaacgc ggtcacgcag
     1861 gacgcgcggc tcaaggcggc gctcatcgcc gagcgtgcgc gggtgatcga gggacgcaag
     1921 cgggacacgc gcggcgcaat ggagctttac cggctcgcgc tcgagacgga tccgcgcacc
     1981 acgggcgcga ttcacgcgct caaacggctg tgcttcgccg aggagcgctt cggcgacctg
     2041 gtctcggtgc tggcgcacga agccgagctc gtgagcggac ccgaagcgcg ttcgctctcg
     2101 ttttatcgcg ccggtcgcgt gctctccgat cggctgggcg cgctcgacaa agcggccgaa
     2161 gcgttcgaga gcgcagcgcg cgaagcgccg agggaccggc tcgtgctcga agagctcgcg
     2221 cgcgcccacg agcttgccaa gcgctggccc gagcttgcct cggtgctcga gcgactcgtg
     2281 gcgctcgcgc cgacacccgc cgagaaggtg ggcttcttcc accagctcgg tgagctcgcc
     2341 gaggagcggc tgggcgagga agagctcgcc atcacctggt tcgagcgcgc gcgtgaggcc
     2401 gatccgctgt acttgcccgc aattcaggcg ctttccaagc tgtacacgcg gcgcgagaac
     2461 tggacggcgc tcctcgccg
//
LOCUS       DATIML010001315         3198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4027020, whole genome shotgun sequence.
ACCESSION   DATIML010001315 DATIML010000000
VERSION     DATIML010001315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3198
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4027020"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>3198
                     /locus_tag="VLJ38_22625"
     CDS             <1..>3198
                     /locus_tag="VLJ38_22625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42402.1"
                     /translation="DKQVAEQQGCMTEMRLAGPFGHNTPRDTLRSFAAEAPGAWAARW
                     EPDAETGEAPRVLKTVTHGCSVSADEPLPEGIAYAETFFDVDQPAELLVAVQGAFAVW
                     VDDTLVLRRDLREWGAWLRFGVRLGLDAGRHRIVAKLGAPTTSIRVLYPDGRPYGKPS
                     SAEPTRPYLARAPRSITPDNVLDSWVDAHGVKDPGDDLVRFFGAQVAEIDDQSDVASV
                     LIDPLVSDVEHATGPSLAAAASFVQDDPVYADAQRRDLSRELGERAVKKDARLWQPRL
                     AIAGAEAEQTGPIESARDVAALVDQFPDVPAVLSELAELYHQLGWSAEFAAAAHRLEQ
                     RFPDDPDALEQAVIVHDQQGEPDKADALVKRILALDPDNEIALGRALERADYKAALAE
                     LERLGKRRPDRKDIAERIHDVMVRAGNEAETWKKLEAAIAKDPRQDEPRLALADARFA
                     QGDKQALIKAVVESVEHGAPTARLEAALDLVEGATELEPYRIDTGTAIREFEHKKQDM
                     SGTAARVLDYSALWIHSDGSSRLLEHEIVRVQTAEAIGDMAEQPLRAGRFLKLRVLKQ
                     DGSVLEPEVVAGKPTVTMPHLEVGDYIETERIESNEGDGRHGVHYIGPRWFFREENIA
                     YARSEFVVISPTDKALQIETKNDVPAPAVTEGSGLTVRRWRVDKSPAAPVEPFGAPIT
                     EFLPSVQIGWGISLEATLRALADSADDLTPIDPRVTKIAEHVVEPLPPAARAERAKKL
                     YHWITANVEEGQESDGRRVVVSKNGNLWRGYLALCRSLGIQADYAVVQNRLTLPPSGP
                     FSSSMQYTQPLLRVRSEKGDLWLTLGSKHAPFGYVPAEVRGMPAVVFLGDHSEKTESP
                     AAGALDRASTEGTAKLAPDGSATVDLVQTFQGKYATGLRTVLSQLPERQIRDALEGRL
                     LGSALRGVELVEYHLEGVADPDAPIRIVTRSRARSFAQIVGSTLLVAPPAFTPRLSQF
                     ATLPVRQTPLLIVESIAQDVKISVELPPGASVQTTVTPNKLADGERKVDVEDTVKGQT
                     LVFERHVTLPAGRIQPNEYPSFLDFTRRADEALAG"
BASE COUNT          535 a         1125 c         1088 g          450 t
ORIGIN      
        1 cgacaagcaa gtggccgagc agcagggttg catgacggaa atgcggctcg cgggtccctt
       61 cgggcacaac acgccgcgcg acacgctgag gtcgttcgcg gccgaggcgc cgggcgcgtg
      121 ggccgcgcgc tgggagcccg acgccgaaac gggcgaggcg ccgcgcgtgc tcaagacggt
      181 gacgcacggt tgcagcgtga gcgccgacga gccgctgccc gagggcatcg cgtacgcgga
      241 gacgttcttc gacgtcgatc agccggccga gctcttggtc gccgtacaag gcgctttcgc
      301 ggtgtgggtc gacgacacgc tcgtgctgcg gcgtgacttg cgcgaatggg gcgcgtggct
      361 ccgcttcggc gtgcggctcg gtctcgacgc cggccggcat cgcatcgtgg ccaagctcgg
      421 tgcgccgacc acgtcgatcc gcgtgcttta cccggacggc agaccgtacg gcaaaccgag
      481 cagcgccgaa ccgacccgtc cttacctcgc gcgcgcgccg cggagtatca cgcccgacaa
      541 cgtgctcgac tcgtgggtgg acgcgcatgg cgtcaaggat cccggcgacg atctcgtccg
      601 cttcttcggc gcacaggtcg ccgagatcga cgaccaatcc gacgtcgcgt ccgtgctgat
      661 cgatccgctc gtctccgacg tcgagcacgc gaccgggccg tcgctggcgg cggcggcgtc
      721 cttcgtgcag gacgatcccg tttacgcgga cgcgcagcga cgcgatcttt cgcgcgagct
      781 cggcgagcgc gccgtcaaga aggacgcgcg gctctggcag ccgcgactgg cgatcgcggg
      841 cgccgaggcg gagcagactg ggccgatcga gtccgcacgc gacgtggcgg cgctcgtcga
      901 tcaatttccc gacgtaccgg ccgttctgag cgagctcgcc gaactctacc accagctcgg
      961 ctggtcggcg gagttcgccg cggcggcgca tcggctcgag cagcgcttcc ccgacgaccc
     1021 cgacgcgctc gaacaagccg tgatcgtgca cgaccagcag ggcgagcccg acaaagccga
     1081 cgcgctcgtc aagcgtatcc tcgcgctcga tccggacaac gagatagccc tcggccgcgc
     1141 gctcgagcgc gccgactaca aggccgcgct cgccgagctc gagcgtctcg gcaagcgccg
     1201 cccggatcgc aaggacatcg ccgagcgcat tcacgacgtg atggtgcgcg cgggcaacga
     1261 agccgagacc tggaagaagc tcgaggccgc gattgcaaag gatccacgcc aagacgagcc
     1321 gcgcctcgcc ctcgccgacg cccgctttgc gcagggcgac aagcaagcgc tgatcaaggc
     1381 ggtcgtcgaa tcggtcgagc acggcgcgcc gacggcgcga ctcgaagccg cgctcgatct
     1441 ggtcgaaggt gcgaccgagc tcgagccgta ccgcatcgac acgggcacgg ccatccgcga
     1501 gttcgagcac aaaaagcagg acatgagcgg caccgccgcg cgcgtcctcg attattccgc
     1561 gctctggatc cacagcgacg ggtcgagtcg cttgctcgag cacgagatcg tgcgcgtaca
     1621 gacggcggag gccatcggcg acatggcgga gcagccgctg cgcgccggtc ggttcttgaa
     1681 gctgcgcgtg ctcaagcagg acggcagcgt gctcgagccg gaggtcgtgg cgggcaagcc
     1741 cacggtgacg atgccgcacc tcgaggtcgg cgattacatc gagaccgagc gcatcgagag
     1801 caacgagggc gacggacggc acggcgtgca ctacatcggc ccgcgctggt tcttccgcga
     1861 ggagaacatc gcctacgcgc gcagcgaatt cgtcgtgatt tcgccgacgg acaaggcgct
     1921 gcaaatcgag acgaagaacg acgtgcccgc gccggccgtc accgaaggca gcggcctcac
     1981 cgtgcggcgc tggcgcgtcg ataagagccc cgcggcgccg gtggagccgt tcggggcccc
     2041 aatcacggag tttttgccca gcgtgcagat cggttggggc atctcgctcg aggccacgct
     2101 gcgcgccctc gcggattcgg ccgacgatct gacgcccatc gatccgcgcg tcaccaagat
     2161 cgccgagcac gtcgtcgagc cgctgccgcc cgcagcgcgc gccgaacgcg ccaagaagct
     2221 ctaccactgg atcaccgcca atgtggaaga aggccaggag tccgacggcc gccgcgtcgt
     2281 cgtgagcaag aacggtaacc tctggcgcgg ctacctcgcg ctctgccgct cgctcgggat
     2341 tcaagccgac tacgccgtcg tacagaacag gctcacgctg ccgccgtccg gaccgttctc
     2401 gagctcgatg cagtacacgc agccgctgct gcgcgtccgg agcgagaagg gtgatctctg
     2461 gctcacgctc ggttccaagc acgcgccgtt cggctacgtg cccgccgaag tgcgcggcat
     2521 gcccgccgtc gttttcctgg gcgatcactc ggaaaagacg gagtctcccg ctgccggtgc
     2581 gctcgatcgc gcctcgacgg agggcaccgc caagctcgcc ccggacggct ccgcgacggt
     2641 tgacctcgtg cagacgtttc agggcaagta cgcgacgggc ctgcgcaccg tgctctcgca
     2701 actccccgag cggcagatcc gcgacgcgct cgaggggcgc ttgctcggct cggccctgcg
     2761 cggcgtcgag ctcgtcgagt accacctcga aggcgtcgca gaccccgacg cgcccatccg
     2821 catcgtcacg cgctcgcgcg cccgttcgtt cgcgcaaatc gtcggctcca ccttgctcgt
     2881 cgcgccgccg gccttcacgc cacggttgag ccagttcgcg accttgcccg tgcggcaaac
     2941 gccgctcctc atcgtcgaat cgatcgcgca ggacgtgaag atcagcgtgg agctgccgcc
     3001 gggcgcgagt gtgcagacga ccgtcacgcc caacaagctc gcggacggcg agcgcaaagt
     3061 ggacgtcgag gacacggtga aaggccagac gctcgtgttc gaacggcacg tgacgctgcc
     3121 tgccggccgc attcagccga acgaataccc gtcgttcctc gatttcaccc ggcgggcgga
     3181 cgaagcgctc gcgggcag
//
LOCUS       DATIML010001316         2436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2016482, whole genome shotgun sequence.
ACCESSION   DATIML010001316 DATIML010000000
VERSION     DATIML010001316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016482"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1847)
                     /locus_tag="VLJ38_22630"
     CDS             complement(<1..1847)
                     /locus_tag="VLJ38_22630"
                     /inference="COORDINATES: protein motif:HMM:NF021379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2079 domain-containing protein"
                     /protein_id="HSU42403.1"
                     /translation="MGKPTTDNAVFPAAARPEADLSALARGAGAWALIVGSLAYAVGL
                     CAVPKLADLVGRNRIASQDRDQLLLGVLVAAFGSALVCAAACVRNRASTRALVATGRV
                     ALPLAFSGPTVALLASDKLDLLPRVSAMAVLVLAFDRALLISLREMGTVPNGAFATLK
                     SAFDLSLKRLDALRFGRVYALDLVVVLLAAGYAAYTGYFTVLRHHHFATMSNDLGQYD
                     NAFYNALHGHPFRSTPLLPEGNWSALRSHAEFAMYALLPFYALYPHAETLLVVQSVLL
                     GSAAVPIYRLASRHTSRSVGLALALAYLLYAPLHGTNFYDIHFQPIGAAFSLWALDRL
                     DAKKRIPFAIAFTLALASREDVPLIFIATGAFLVFSGRAPRAGVVLAAVAGFYFCVMK
                     FVVMPHFGTWWYQHIYKGLFPAHDETYGGVVKTLVSNPVFSFGTLVTDKKFAYALLIL
                     TPLAFLPLRGRWLWLGLLPGSVVTLLTTEYEPTLDISFQYSAYLIALIFPASALALEG
                     LGHLGPERRSAAVGALLAGTLLTTTAWGAIPPRRHFRAAYGDIDFEPAHEHEKKKAAR
                     LAELAALVPPDASLAVSEHELPHVSGRTRCFDLKDNFFDADYVLYERDSG"
     gene            complement(1919..>2436)
                     /locus_tag="VLJ38_22635"
     CDS             complement(1919..>2436)
                     /locus_tag="VLJ38_22635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42404.1"
                     /translation="LYDFTPVAEKLTGYDACFFCLGVTSVGATEADYRRVTRDIPAAA
                     GRVLAARNPGMTFVLVTGRGTDATGTSKTMWARVKGEAENAILALPFKGKYVFRPGVI
                     QPLHGITSRTPSYRVLYALFSWVVPILRWLAPESMTTTERMGRAMLNVARRGYSKPVL
                     ETADINAAAAS"
BASE COUNT          474 a          758 c          839 g          365 t
ORIGIN      
        1 ccgctgtcgc gctcatagag gacgtagtcg gcatcgaaaa agttgtcttt cagatcgaag
       61 cagcgcgtac ggccggaaac gtgcggcagc tcgtgctcac tcacggcgag tgaggcgtcc
      121 ggaggaacga gcgcggcgag ctcggcgagg cgagcggctt tctttttttc gtgctcgtgc
      181 gccggctcga agtcgatgtc gccgtacgct gcacgaaagt ggcggcgtgg tgggattgcg
      241 ccccaggccg tcgtcgtgag cagcgtgccc gcgaggagcg cgcccacggc cgcactccgt
      301 cgctcgggcc ccaagtggcc gagtccctcg agcgcgagcg ccgaggcggg gaaaatcagc
      361 gcgatgaggt acgcgctgta ttgaaaggaa atgtcgaggg tcggctcgta ctcggtagtg
      421 agcagggtga cgacggaacc cggcaagaga cccagccaga gccagcggcc gcggagcggc
      481 aagaacgcca gcggcgtcag gatcaagagc gcgtacgcga acttcttgtc cgtcacgagc
      541 gtgccgaacg aaaacacggg atttgacacg agcgtcttca cgacgccgcc gtacgtctcg
      601 tcgtgtgctg gaaacagacc cttgtagatg tgctggtacc accacgtgcc gaagtgcggc
      661 atcacgacga acttcatcac acaaaaatag aacccagcca ccgcggcgag gacgacgccc
      721 gcccgcggcg cgcggccgct gaagacgagg aacgctcccg tcgcgatgaa gatgagcggc
      781 acgtcttcgc gcgaggcgag cgcgagcgtg aaggcgatcg cgaacgggat gcgtttcttg
      841 gcgtcgagcc ggtcgagcgc ccagagcgag aacgcggcgc cgatcggctg gaaatggatg
      901 tcgtagaaat tcgtgccgtg aagcggcgca taaaggaggt acgcgagcgc gagcgcgagt
      961 ccgaccgaac gcgacgtgtg ccggctcgcc aggcgataga tcggcacagc ggcgctgccg
     1021 agcagcaccg attgcacgac gagcagcgtc tcggcgtgcg ggtagagcgc gtaaaacggc
     1081 aagagcgcgt acatcgcgaa ctctgcgtgg ctccggagcg cgctccagtt gccctcgggc
     1141 aagagcggtg tggagcggaa cggatggccg tgcagcgcgt tgtaaaacgc gttgtcgtac
     1201 tggccgagat cgttgctcat cgtggcgaaa tggtgatgcc tgagcacggt gaaatacccc
     1261 gtgtacgcgg cataaccggc tgccaggagc acgacgacga gatcgagggc gtagacgcgg
     1321 ccgaagcgga gtgcgtcgag tcgtttcagc gacaggtcga acgcggactt gagcgtcgca
     1381 aaagcgccgt tcggcaccgt ccccatttct cggagcgaaa tcagcagcgc tcgatcgaaa
     1441 gcgagcacga gaacggccat cgcgctcacg cgtggcagaa ggtcgagctt gtcgctcgcg
     1501 agcagggcca ccgtggggcc cgagaatgcg agcggcagcg cgacgcgtcc agtcgcgacg
     1561 agcgcccgcg tgctcgctcg gtttcgcacg caggcagcgg cgcacaccaa ggccgagccg
     1621 aacgcagcca cgagcactcc gagcagcagc tgatcgcgat cttgggaggc gatgcgattg
     1681 cggccgacga ggtcagcgag tttaggaacg gcgcagagac cgaccgcgta ggcgagcgag
     1741 ccgacgatga gtgcccaagc gccagctccg cgagcgagcg cggagagatc cgcttctggg
     1801 cgtgcggccg cgggaaaaac tgcgttgtcc gttgtaggtt tccccacgat ccaccgcggc
     1861 ggacgctatc atccaacttt tttgccggca acccgccagc ctgagcagcc gccggcgctc
     1921 agctcgctgc tgccgcgttg atatccgcgg tctccagcac gggcttcgag tagccgcggc
     1981 gcgcgacgtt caacatcgcg cgccccatgc gctcggtcgt cgtcatcgac tcgggtgcga
     2041 gccagcgcag aatcggcacg acccaactga agagcgcgta gagcacccga tacgacggcg
     2101 tgcgcgacgt gatgccgtgg agcggctgga tcaccccggg ccgaaatacg tatttgccct
     2161 tgaacggcag cgctaaaatc gcgttctccg cttcgccttt cacgcgcgcc cacatcgtct
     2221 tgctcgtgcc ggtcgcgtcg gtgccccggc ccgtcacgag cacgaacgtc atccctgggt
     2281 ttcgcgcggc gaggacgcgt cccgccgcgg cggggatgtc ccgcgtcact cgccgatagt
     2341 cggcttcagt tgcgccgacg gaggtcaccc ccaaacaaaa gaaacaagcg tcatagcccg
     2401 tcagcttttc ggccaccggc gtgaagtcgt agaggt
//
LOCUS       DATIML010001317         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2589097, whole genome shotgun sequence.
ACCESSION   DATIML010001317 DATIML010000000
VERSION     DATIML010001317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2589097"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..1364
                     /locus_tag="VLJ38_22640"
     CDS             183..1364
                     /locus_tag="VLJ38_22640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42405.1"
                     /translation="MRSKIIVVNAGIVILVALLSYVLLATSLKNVVSDPAERKHEVER
                     SLRAANAQLALDALRVERWLEKNVTSEQTRGVFGLGTPEARQQAALNEANRLRDAAQG
                     DQQFTGMAPSLVAIVDDQGVVVSRDGSNLMRGEKLSQAYPVLADALKSGRAGSSVWIN
                     RQRQEQELVSYGIVKGDNGAVLGAVVVGTPLNDERMTRTSELTSGSLLVFARSYDKGL
                     EAVADSGGNHAQAALAAATSASVAAAARTASTSKAIASVDSVLAGDLFGAMPLDGYGP
                     TDSVLIAAVPASLVDSVASLLWPVLAVGALGLLMVVFAGVLLGNYISQPVSELEDGLL
                     AIINGQQDLRFQIEHDELGGLVFRINSLLNALAGVPEDTTDDQGRPSKAPSANDFQEP
                     A"
BASE COUNT          289 a          533 c          521 g          260 t
ORIGIN      
        1 gcgaggctat gctgcatgag gcgctgagcc tagcgccggc aggggatttt cactagcgcg
       61 ggcaccggcg cgtcacttgc cccgccggac actggagaag aagggcggac ggatgatagg
      121 ctgggccacg atttgcttgg cgccggagtg tcggcgacca ggccaccgca aggggaagag
      181 ccatgcgctc caagatcatc gtcgtcaacg ccgggattgt gatcctggta gcgctcttgt
      241 cttatgtgct gctcgcgacg tcgctcaaga acgtcgtgtc ggaccccgcc gaacgcaagc
      301 acgaggtaga gcgctcgctc agagctgcca acgcgcagct cgcactcgac gccctacgcg
      361 tcgaacgttg gctcgaaaag aacgtcacct ccgagcagac gcgcggcgta ttcggcctcg
      421 gaacgccgga agcgcgccag caggcggcgc tgaacgaggc caatcggctg cgggatgccg
      481 ctcagggcga ccagcaattc accggcatgg cgccgtcgct cgtcgccatc gtggatgatc
      541 agggcgtcgt cgtgagccgt gacggctcga acctcatgcg cggggaaaag ctttcgcagg
      601 cgtatcccgt gcttgccgac gcgctcaagt ccgggcgggc cggcagcagc gtttggatca
      661 accgccagcg gcaggagcag gagctcgtga gctacggcat cgtcaaaggc gacaatggcg
      721 ccgtgctcgg cgccgtcgtg gtcggcacgc cgctcaacga cgagcgcatg acgcgaacga
      781 gcgagctcac gagcggcagc ttgctcgtct tcgcgcgcag ctacgacaag ggtctcgagg
      841 ccgtggccga cagtggcggc aaccacgccc aagccgccct cgcggccgcg acgagcgcgt
      901 cggtagctgc cgccgcgagg accgcgtcga cgtccaaggc gatcgcgagc gtcgactccg
      961 tgctcgccgg cgacttgttc ggcgcgatgc cgctcgacgg ctacggcccg acggactcgg
     1021 tgctgatcgc cgccgtgcct gcttcgctcg tggacagcgt ggcgtcgttg ctctggcccg
     1081 tcctcgccgt cggcgcgctc ggtctgctca tggtcgtttt cgccggcgtc ctgctcggca
     1141 actacatctc ccagccagta tcggagctcg aagacggctt gctcgccatc atcaacggcc
     1201 agcaagactt gcggttccaa atcgagcacg acgagctcgg cggactcgtc ttccgcatca
     1261 attcgctctt gaacgccctc gccggcgtgc ccgaagacac gacagacgac cagggccggc
     1321 cgtcgaaggc gccgagcgcc aacgatttcc aagagcccgc ctaaacacgt cgcctccgac
     1381 aggttcgcct ccgagcgatc cgcgaatttc tcgtaggaag cgcaaatttc cgacgctcgc
     1441 gctaaacgtg ctagttcggt cacaactgga cggaaaatcg ccgtgggtat cttcgatttt
     1501 ttcagtaagg gtcgcgacga gcgacccaaa gcggcacgcg acatcgcgcg cctcgagcgc
     1561 ctcgtctcga acaagctttc gcagaattac gaccgccagg agg
//
LOCUS       DATIML010001318         2883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5766751, whole genome shotgun sequence.
ACCESSION   DATIML010001318 DATIML010000000
VERSION     DATIML010001318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5766751"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /locus_tag="VLJ38_22645"
     CDS             complement(<1..780)
                     /locus_tag="VLJ38_22645"
                     /inference="COORDINATES: protein motif:HMM:TIGR02824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HSU42406.1"
                     /translation="MRAVVVRAPGGPEVLELAEVPDPVPGEREVVIDVRAAALNRADL
                     LQRRGVYPPPPGASTLLGLECAGVVAALGPGIASAKVGDRVMALLPGGGYAERVAVHE
                     QLLLPIPDALDFVQGAAVPEAFLTASEALFSLGRVMPGDWVLIHAAASGVGSAAVQLA
                     RLAGARVLATTSAGKVEAVRALEPDRVVARDREDFASVALELTDGRGVDVIVDLVGAA
                     YFAQHAACLAVLGRHVVVGLVGGAKVELDLGRVLARRLSILG"
     gene            complement(821..1702)
                     /locus_tag="VLJ38_22650"
     CDS             complement(821..1702)
                     /locus_tag="VLJ38_22650"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HSU42407.1"
                     /translation="MLIGVDFGGTQVKAGIVDGGNVVRSLVADTPPGAAVRDVLTTLT
                     SVVLQLSAKPDAVGFAIPGEVDSEGRCWRLTNVPGFEGVHIGRELAERLNCPIAVEND
                     ATAAALGERLYGHGRAYPSFLMITLGTGIGGGLVMGHSLYPGTHGFAGEVGHMNVTRS
                     LDAPLCACGQRGCIEAYVGTKGLLRRFRELGGHADEVLPIALAARSGQEAGLRVFEEM
                     GEALGKGLANIQNLLDLNAIVFSGGISASFDLLEPHVRRALREYAFAPPLAEVPLLVS
                     ELGERAGVIGAAHLTEL"
     gene            1853..2164
                     /locus_tag="VLJ38_22655"
     CDS             1853..2164
                     /locus_tag="VLJ38_22655"
                     /inference="COORDINATES: protein motif:HMM:NF021188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoic acid system family protein"
                     /protein_id="HSU42408.1"
                     /translation="MKHSVSHDLGQQRAKEAAKAAMAAYEKKFAKYHPQTHWVSDSRA
                     NISFSVKGMSLSGAIEVLERSIDLDLDVPFLLRPFKNQALGVIEGEIREWIDKARAGQ
                     I"
     gene            complement(2312..>2883)
                     /locus_tag="VLJ38_22660"
     CDS             complement(2312..>2883)
                     /locus_tag="VLJ38_22660"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSU42409.1"
                     /translation="RALERAGATLVPVDLPLARHAAAMGYLTIAIEAGAALREVAALK
                     GREFGHDLQIFLAGVHAFAADDYVVAQRLREALRGEAERALRSVDLIALPTTANVAPP
                     ITDAEAASGLLDTHALDAACRFAFLGNLLGLPACSVPVGTGAHGLPVGLQLVGDAWDE
                     ASVLAAAAELERLGVAASQRAPDALDLLG"
BASE COUNT          519 a         1017 c          938 g          409 t
ORIGIN      
        1 acctaggatc gacaaacggc gcgcaaggac gcggccgaga tcgagctcga ctttggcccc
       61 accgacgaga ccgaccacga cgtggcggcc gagcacggcg aggcaagccg cgtgctgcgc
      121 gaaatacgct gcccccacga gatcgacgat gacatcgacg ccgcgtccgt ccgtgagctc
      181 gagcgcgacg ctcgcaaagt cttcacggtc acgcgcgacg acgcggtccg gctcgagcgc
      241 gcgcacggcc tcgactttgc cggcactggt cgtcgcgagc acgcgtgcgc ccgcgagccg
      301 cgcgagctgc accgctgccg agcccacacc gctcgccgct gcgtgaatca gcacccagtc
      361 gccgggcatg acgcgcccga gcgaaaagag cgcctcgctc gccgtgagga acgcctccgg
      421 cacggccgca ccctgcacga agtcgagcgc gtcggggatc ggcaagagca gctgctcgtg
      481 cacggcgacg cgctcggcgt acccgccgcc cggcaagagc gccatcacgc ggtcgccgac
      541 tttggccgac gcaatgccgg gaccgagcgc cgctacgacg ccggcgcatt cgagaccgag
      601 caacgtggac gcgcccggcg gtggcggata cacgccgcgc cgctgcagca aatcagcgcg
      661 attgagcgcc gcggcgcgca cgtcgatcac gacctcgcgc tcaccgggca ccggatcggg
      721 cacttcggcg agctcgagca cttcgggacc acccggcgcc ctgacaacga ccgctcgcat
      781 gcgagcgttt tagcagatgc gcgtcaaagc tagctgcgcg tcaaagctcg gtgagatgcg
      841 ccgccccgat gacgccggcc cgctcgccga gctcgctcac gagcaggggc acttccgcca
      901 agggcggggc gaatgcgtac tcgcgcagcg cacgccggac gtgcggttcg agcaaatcga
      961 acgaggcgga gatgccgccc gaaaatacga tcgcgttcag atcgagcagg ttttgaatgt
     1021 tcgccagtcc cttaccgagc gcttcaccca tctcttcgaa gacgcgcagg cccgcttcct
     1081 gaccgctccg ggcagcgagc gcgatgggta ggacttcgtc ggcgtgaccg ccgagctcac
     1141 gaaagcgccg gagcaggccc ttggtcccga cgtacgcctc gatgcaaccg cgctggccac
     1201 acgcgcacag gggcgcgtcg agcgagcggg tgacgttcat gtgaccgacc tcgcccgcga
     1261 agccgtgcgt gcccggatag agcgagtgac ccatcacgag gccaccgccg atgccggtgc
     1321 cgagcgtaat catgaggaaa ctcgggtagg cgcggccgtg gccgtacaaa cgctcgccga
     1381 gggcggccgc cgtcgcgtcg ttctcgacgg cgatgggaca gttcagtcgc tcggcgagct
     1441 cccggccgat gtgcacccct tcgaatccag ggacgttcgt caggcgccag cagcgaccct
     1501 cgctatccac ctcgcctgga atcgcgaacc cgacggcgtc cggcttggcc gaaagctgga
     1561 gcaccacgct ggtgagcgtc gtgagcacgt ccctcactgc cgcgccgggc ggcgtatcgg
     1621 ccacgagcga ccggacgacg ttgccgccgt ccacgatgcc agcctttacc tgcgtaccgc
     1681 caaagtcgac gccaatgagc atccgtccgt cctcgatgcg gatccgtcgc ctcgccacgc
     1741 ggggtgaccg accctgaacc ccgaaccata gcgccacatt ccgcgcgccg aaaggctcac
     1801 cccggcatac atcggcttac ttttttcctc caacgcggta cggtggcggc gcatgaagca
     1861 ctcggtttcg catgatctcg gccagcagcg cgccaaggag gccgccaaag ccgccatggc
     1921 cgcgtacgaa aagaagttcg ccaagtatca tccgcaaact cactgggtga gcgactcgcg
     1981 cgcgaacatc tcgttctcgg tcaaaggcat gagcctgagc ggggcgatcg aggtgctcga
     2041 gcgctcgatc gatctcgatc tcgacgtgcc cttcctgctc cgacccttca aaaatcaagc
     2101 gctcggcgtg atcgaaggcg agatccgcga atggatcgac aaggcccgcg cagggcaaat
     2161 ctgacggaac gcttgaaccc ccaagacgcc aagggcgcca agttttttta aattttgagc
     2221 aggcgttttg atgacctgct ccaagtccat tccgatcacc cccccttggc gctcttggcg
     2281 tcttggcggt tcactcccct ccggtgcccc gctagccgag taaatcgagc gcgtcgggcg
     2341 cacgctgcga cgccgcgacg ccgagtcgtt cgagctcggc cgctgcagcg agcacgctcg
     2401 cttcatccca cgcgtcgccg acgagttgca ggccgaccgg cagaccgtgc gcacccgtac
     2461 ccaccggcac cgagcaagcg ggcagtccga gcaggttgcc gagaaacgcg aagcgacagg
     2521 cggcgtccag cgcgtgcgta tcgagtaggc ccgaggccgc ttcggcgtcc gtgatcggtg
     2581 gcgcgacgtt tgcggtcgtg ggcagcgcga tgagatcgac ggagcggagc gcgcgttcgg
     2641 cttcgccgcg gagcgcctcg cgcaagcgct gcgccacgac gtaatcgtcg gccgcgaaag
     2701 cgtggacgcc tgcgaggaag atttgcaaat cgtggccgaa ttcgcggccc ttcagcgcgg
     2761 cgacttcacg cagcgccgcg ccggcttcaa tcgcaatcgt gaggtagccc atcgccgcgg
     2821 cgtggcgcgc gagcggcaaa tcgacgggca cgagcgtcgc gcccgcgcgc tcgagcgcac
     2881 gaa
//
LOCUS       DATIML010001319         3633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2298516, whole genome shotgun sequence.
ACCESSION   DATIML010001319 DATIML010000000
VERSION     DATIML010001319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2298516"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VLJ38_22665"
     CDS             complement(<1..472)
                     /locus_tag="VLJ38_22665"
                     /inference="COORDINATES: protein motif:HMM:NF017442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF790 family protein"
                     /protein_id="HSU42410.1"
                     /translation="MLSPDHVRVRRQGDELKLLALAGELRDRAVELARSARELACEHV
                     GRTREELEDAWATLEIAPRERKVLLGLKKLVEDACDFEAGDADEAASLRRDLFLTATA
                     RRREEEGAFVRARVLAEVAAARGTSPEGVESMLYADLRGAQRLIACHAPAAELLV"
     gene            complement(472..1836)
                     /locus_tag="VLJ38_22670"
     CDS             complement(472..1836)
                     /locus_tag="VLJ38_22670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HSU42411.1"
                     /translation="MSVVLGFADGTLELNGLGQDDAAPGECRWDVRSACHRAPALAYA
                     EVVLELRRRKIAYEDRARAYVELEPKLALERAARPFQREALDEFRRAGGRGVVVLPTG
                     AGKSHVGVLAIDDRRRSALVVVPTLDLVRQWYDLLRTSFATEVGIVGGGSHDLKPLTV
                     TTYDSAYLHMAHFGARFGLIVFDECHHLPGATYELAAELCLAPFRLGLTATPERPDGR
                     EARLTRLIGPVVYRRDIIELAGEYLSEYEAVQVSIELSAEERAEYEEHRKIYLDFVRG
                     QGIRFSQPNGWNDFLMRASRTPAGLRALAAYRRQRELALAAGKKLEYVELLLERHRRD
                     RTLIFTEDNATAYAVSRRFLVPVITHQTKVRERSEILERFSRGDYGVVATSKVLNEGV
                     DVPEANVAIVISGSGSVREHVQRLGRVLRRREGKQAVLYELVAAKTGEAYTSERRRAH
                     SAYQ"
     gene            complement(1833..2582)
                     /locus_tag="VLJ38_22675"
     CDS             complement(1833..2582)
                     /locus_tag="VLJ38_22675"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSU42412.1"
                     /translation="MRTNRLPPVRGTRSTTRRTGIFRARIIETNPLEILLVRHGESEG
                     NAQDRMQGRSDFPLTEHGRSQAKQLGAWLASLDLGWHALYASPLLRAWETAAIVHGAA
                     GGPVPVLEPSLAEIHAGELEGLSFVEIVERFPSYTSRGVGGIGDFSEFGGESYDDVQR
                     RAAELFRRLEAKHRGHAERVLCVGHGGLNFQLLKQLICDPVPRVCIVRMGNCSATLVR
                     FRERRGTFMGEIVWHVPVELMGGKSREGARP"
     gene            2572..3006
                     /locus_tag="VLJ38_22680"
     CDS             2572..3006
                     /locus_tag="VLJ38_22680"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HSU42413.1"
                     /translation="MVRIDIEYEGELHCHAVHGPSGKALETDAPVDNHGRGESFSPTD
                     LLATALGTCMATVMGILARERNYPLAGMKIRVIKQMTPPPRRVARLDVTLDIPGESAA
                     SIDATGRADLERRANECPVRLSLLPGIEVPVAFNWGSPQSDS"
     gene            3023..>3633
                     /locus_tag="VLJ38_22685"
     CDS             3023..>3633
                     /locus_tag="VLJ38_22685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42414.1"
                     /translation="MPRILFVSKPLGSPWNDSSKNLVRDLALGLSRYDALAFGRRGGP
                     PSLGRARLEPLHPRDRPGFRPGLRENGRVLARLLLGPRTDAWHFFFAPNAKTSRIARL
                     LARTRRARTVQTVCSVPADGADLEQVLFGERVVVLSKHTERRFLAAGIAPARLVRIAP
                     AAPPLELPHAEQRRSTRRELGLHGERPLLLYPGDLEFGRAAALV"
BASE COUNT          563 a         1311 c         1205 g          554 t
ORIGIN      
        1 cgaccaggag ctcggccgcg ggtgcatgac aagcgatcag ccgctgcgcg ccccgtaggt
       61 cggcgtagag catgctctcg acgccctcgg ggctcgtgcc acgcgccgct gccacctcgg
      121 cgagtacacg cgcccgcacg aacgcgcctt cctcttcccg ccgccgcgcc gtggctgtca
      181 gaaagaggtc gcgccggagc gaggccgctt cgtcggcgtc gcccgcttcg aaatcgcacg
      241 cgtcctcgac cagctttttg agtccgagca gcaccttgcg ctcgcgcggc gcgatttcga
      301 gcgtcgccca ggcgtcttcg agctcctcgc gcgtgcgtcc gacgtgttcg cacgcgagct
      361 cgcgcgcgct gcgagcgagc tcgaccgccc ggtcgcgcag ctcccccgcg agcgcgagca
      421 acttgagctc gtcgccctga cggcgcacgc ggacgtggtc ggggctcaac atcactggta
      481 cgccgagtgc gcgcggcgcc gctcgctcgt gtacgcctcg cccgtcttgg cggcgacgag
      541 ctcgtaaagc acggcttgtt tgccctcacg gcggcgcagc acacgaccga gacgctgcac
      601 gtgctcacgc accgaaccgc tgccgctgat gacgatcgcg acgttcgcct cgggcacgtc
      661 gacgccctcg ttcagcacct tcgaagtcgc gacgacaccg tagtcacccc gcgagaaacg
      721 ctcgaggatt tcgctgcgtt cgcgcacctt cgtctggtgc gtgatcacgg gcacgagaaa
      781 gcggcgggag acggcatacg cggtcgcgtt gtcctcggtg aagatcaggg tgcgatcgcg
      841 acggtgccgc tcgagcaaga gctcgacgta ttcgagcttc ttgccggcgg cgagcgcgag
      901 ctcgcgttgc cgccggtaag ccgcgagcgc gcgcaggccc gcaggcgtcc gcgaggcgcg
      961 catcagaaag tcgttccagc cgttcggctg ggaaaagcga atgccctgtc cgcgcacgaa
     1021 atcgaggtaa attttgcgat gctcctcgta ttcggcgcgc tcctccgccg agagctcgat
     1081 gctgacctgc acggcttcgt actcggagag gtactcgccg gcgagctcga tgatgtcgcg
     1141 ccggtagacg acggggccga tcagccgcgt gagacgagct tcacgcccgt cggggcgctc
     1201 gggcgtcgcc gtgagaccga gccggaacgg cgcgaggcag agttcggcgg caagctcgta
     1261 agtcgcgccc ggcaggtggt ggcactcgtc gaacacgatc aggccaaagc gcgcgccgaa
     1321 atgcgccata tgcaggtacg ccgaatcgta ggtggtgacg gtcaggggct tgaggtcgtg
     1381 cgatccgccg cccacgatac cgacttccgt cgcaaagctc gtgcgcaaga ggtcgtacca
     1441 ctgccgcacg agatcgagcg tcgggaccac gacgagcgcg ctccgccgcc ggtcgtcgat
     1501 cgccagcacg ccgacgtgac tcttgccggc gcccgtcggg agcacgacga caccccgccc
     1561 gcccgcgcgc cgaaactcgt ccagcgcttc gcgttgaaac ggccgcgccg cccgctcgag
     1621 cgcgagcttt ggctcgagct cgacgtaggc gcgggcgcga tcctcgtagg cgattttgcg
     1681 gcgccggagc tcgagcacga cctcggcgta ggcgagcgcc ggcgcgcgat ggcacgcgct
     1741 acggacgtcc cagcggcact ctcccggcgc ggcgtcgtct tggcccaaac cgttaagctc
     1801 gagcgtgccg tccgcgaagc cgagcacgac gctcacggcc gcgccccctc gcggctcttg
     1861 ccgcccatga gctcgaccgg cacgtgccac acgatttcac ccatgaacgt gccgcgccgc
     1921 tcgcgaaagc gcacgagcgt cgccgaacag ttccccatcc gcacgatgca aacgcggggc
     1981 accgggtcgc agatgagctg cttcagcagc tgaaagttca gcccaccgtg tccgacgcag
     2041 agcacccgtt cggcgtgtcc gcgatgcttg gcttcgagac ggcgaaaaag ctcggccgcg
     2101 cggcgctgca cgtcgtcgta gctctcgccg ccgaactcgg aaaagtcacc gatcccgccc
     2161 acgccccgcg acgtgtaact cgggaagcgc tcaacgatct cgacgaagct caggccctcg
     2221 agctcgccag cgtggatttc ggcgagcgac ggctcgagga cgggcaccgg tccgccggct
     2281 gcgccgtgga cgatggccgc cgtctcccac gcgcggagca gcggcgaggc gtagagcgcg
     2341 tgccaaccca ggtcgaggga ggcgagccag gcgccgagct gcttcgcctg gctgcggccg
     2401 tgctccgtca aagggaaatc cgaccggccc tgcatgcggt cctgagcgtt gccttcactc
     2461 tcgccgtgtc gaacgagcag gatttccaaa ggattggtct cgataatccg ggctcgaaaa
     2521 atcccggttc tgcgagtagt gctacgtgtc ccccgaaccg gaggcaagcg gttggtacgc
     2581 atcgatatag agtacgaagg cgagctgcac tgtcatgccg ttcatgggcc gtcgggcaag
     2641 gcgctcgaga ccgacgcccc cgtcgataac cacggccgtg gtgagagttt ctcgccgact
     2701 gatttgctcg cgacggcgct cggcacttgc atggcgacgg tgatgggcat cctcgcgcgc
     2761 gagcgcaatt acccgctcgc cggcatgaag atccgtgtga tcaagcagat gaccccgccg
     2821 ccgcgacgcg tcgcacggct cgacgtgacg ctcgacatcc cgggcgagag cgccgcgagc
     2881 atcgacgcca cgggccgagc ggacctcgaa cggcgtgcca acgaatgccc ggtgcgcctg
     2941 agcctcttgc ccggcatcga ggtgcccgtc gcgttcaact ggggctcgcc gcagagcgac
     3001 agctagggcg cggttcgccc tcgtgcctcg cattctcttc gtcagcaagc cgctcggctc
     3061 gccctggaac gactcgagca agaacctcgt gcgcgatctc gcgctcggct tgagccgata
     3121 cgacgccctc gcgttcggac gccgcggcgg cccgccgagc ctcggccgcg cgcgactcga
     3181 gccgttgcac ccacgcgacc ggcccggctt tcgccctggt ctccgcgaaa acggccgcgt
     3241 cctcgcgcgg ctgctgctcg gaccgcgcac cgatgcgtgg cacttcttct tcgcgccgaa
     3301 cgccaagacc tcgcgcatcg cgcgcctgct cgctcgcacg cgccgtgcgc ggaccgtcca
     3361 aaccgtctgc agcgtccccg ccgacggcgc cgatctcgag caggtgctct tcggcgagcg
     3421 cgtcgtcgtg ctctcgaagc acaccgaacg gcgcttcctc gcggcgggca tcgcgcccgc
     3481 gcggctcgtg cgcatagcgc cggccgcgcc tccgctcgag ctcccgcacg cggagcagcg
     3541 ccgctccacg cgtcgtgagc tcggtctgca cggcgagcga ccgctcctgc tctacccggg
     3601 tgatctcgag tttggacgcg cggcggcact cgt
//
LOCUS       DATIML010001320         2573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3454300, whole genome shotgun sequence.
ACCESSION   DATIML010001320 DATIML010000000
VERSION     DATIML010001320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3454300"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1340)
                     /locus_tag="VLJ38_22690"
     CDS             complement(<1..1340)
                     /locus_tag="VLJ38_22690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42415.1"
                     /translation="MQFRCAFVLLLAGSCVGTTASAAPGSSSAGASTAPVSGRRELPE
                     LPHAPDELKQATLAELGEVDELLGRISGDDASARDDGVRGIVELTPRLVPAIRKRLDD
                     LGASSDKNALKQLLAETRRAAKDEPRDDVPGASEDKPSTGPDYLTLLVARAKPSSSSW
                     RDLVKVIGLSRMLEHIGTTPAARGIIDVYVRFGDFLRIDTQRALARLGDRAVPALLEA
                     RRYPSEKIAHWASRQLDMLGRAAPSQAVQIADPEVLSDVLRAYGRTHDLDAARIVVSF
                     AGSERGQLRTASRQAIAMLGEAGHWQLRDAYEDVMGKRAPRDWTWERTARELFGELDR
                     LRRAEVYDLFEAGQKAEAAGDLGAMRKAFDEVLVRAPFFERADEMVGGYWEYAKKYTQ
                     QKPEDAIAALRRAERLGGTGPAHDRIESLLLTLEANRLAQKHVVDRGLYRRALEL"
     gene            complement(1367..1645)
                     /locus_tag="VLJ38_22695"
     CDS             complement(1367..1645)
                     /locus_tag="VLJ38_22695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HSU42416.1"
                     /translation="MALKQLQLTVKGRVQGVYFRASAQREARRLGLTGWVKNRPDGCV
                     EILAEGEEVAIRDLYGWAQKGPGAARVDRVDSRWRSYTGEFPDFRIVD"
     gene            1729..>2573
                     /locus_tag="VLJ38_22700"
     CDS             1729..>2573
                     /locus_tag="VLJ38_22700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSU42417.1"
                     /translation="MSSEAPPGKASLGEERSLRTGALLRREQRISRALREVGTALGAT
                     LDLDELLELILAKLTELLEADRATLYLLDEANGELVSRVVAGGEVRSIRMKVGHGVAG
                     LVAKTGEPIRIEDAYRDARFEREWDLLTGYRTNNMLAAPLKNHVGRTMGVIQVLNKRG
                     GDGFTSDDEDILGALGTQAAVAIDNSRLLLSLIQKNQQLFETKEQLERKFRELSLLFE
                     LERATARATSVDELALATLTQVATACNARGGALLLADEETGDLVERRLDRVAASGLER
                     RAAKAG"
BASE COUNT          402 a          895 c          872 g          404 t
ORIGIN      
        1 agctcgagcg cacggcggta gagcccccga tccacgacgt gcttttgcgc gaggcggttc
       61 gcttccagcg tcagcaagag actttcgatg cggtcgtgtg cggggcccgt gcccccgagt
      121 cgttcggcgc gcctgagcgc ggcgatggcg tcctcgggct tttgctgggt gtatttcttt
      181 gcgtactccc agtagccgcc gaccatttcg tccgcgcgct cgaagaatgg cgcgcggacg
      241 agcacctcgt cgaacgcttt gcgcattgcc ccgaggtcgc ccgctgcctc ggctttttgt
      301 cccgcctcga acagatcgta cacttcggcc cggcgcagcc ggtcgagctc gccgaagagc
      361 tcgcgagccg tgcgctccca cgtccagtcg cgcggcgctc gcttgcccat cacgtcttcg
      421 tacgcgtcgc ggagctgcca gtgccccgct tcaccgagca tggcgatggc ttggcgcgac
      481 gcggtacgga gctgcccgcg ctcgctgccc gcgaacgaaa cgacgatacg cgccgcgtcg
      541 agatcgtgcg tgcgcccgta agcgcgcagc acgtccgaga gtacctcggg atcggcgatt
      601 tgaaccgcct ggctcggcgc cgcgcggccg agcatgtcga gctgccggct cgcccagtgc
      661 gcgatctttt ccgacgggta gcgccgggct tcgagcaagg ccggcacggc gcgatcgccg
      721 aggcgcgcga gcgcacgctg cgtgtcgatg cgcagaaaat cgccgaaacg cacgtacacg
      781 tcgatgatgc cgcgcgccgc gggcgtcgtg ccgatgtgct cgagcatgcg gctcaggccg
      841 atgactttca ccaggtcgcg ccagctggac gagctcggct tcgcgcgagc gacgagcagc
      901 gtgaggtagt cgggacccgt gctcggtttg tcctcgcttg cgcccggcac gtcgtcgcgc
      961 ggctcgtctt tggcggcgcg gcgcgtctct gccaagagct gcttcagcgc gttcttgtcc
     1021 gaagaggcgc cgaggtcgtc gaggcgcttg cggatcgccg gcacgaggcg cggcgtgagc
     1081 tcgacgatcc cgcgcacgcc gtcgtcacgc gcgctcgcgt cgtcaccgct gatgcggccg
     1141 agcaattcgt cgacctcgcc gagctccgcg agcgtcgctt gcttgagctc gtcgggcgcg
     1201 tgcggcagct cgggaagctc acgccggccg ctcacgggcg ccgtgctcgc acccgcggag
     1261 ctcgacccag gcgcagcgct cgccgtcgtg ccgacacacg agcccgcgag cagcagcacg
     1321 aacgcacacc ggaactgcat ctctattgcc gatggatccg cccgggttag tcgacgatgc
     1381 ggaagtcggg aaactcaccc gtgtagctgc gccagcgcga gtccacgcga tcgacgcgcg
     1441 ccgcgcctgg acccttctgc gcccagccgt acaggtcgcg aatggcgact tcctcgcctt
     1501 cggcgaggat ctcgacgcag ccgtccgggc gattcttcac ccagcccgtg aggccgagcc
     1561 gccgcgcctc acgctgggcc gaagcgcgaa agtacacgcc ctgaacccgg cctttgacgg
     1621 tgagctggag ttgcttcaaa gccatgcgct ctcgatgatc agtagcgaag gcggcaaggt
     1681 cgcgcaaccc tgtggatccg cgcctaagtt cgtgattcga taaaacatgt gagctcggag
     1741 gccccgccgg gaaaagcatc gctcggcgag gagcgtagcc tccgaacggg cgcgctgctc
     1801 cgccgcgagc aacgcatctc gcgcgcgctc cgcgaagtgg ggacggcgct cggagccacg
     1861 ctcgatctcg acgaattgct cgagctcatc ctcgccaagc tcaccgagct gctcgaagcc
     1921 gatcgcgcga cgctctacct gctcgacgag gccaacggcg agctcgtgag ccgcgtcgtg
     1981 gccggcggcg aagtccgctc gatccgcatg aaggtcgggc acggcgtcgc aggcctcgtg
     2041 gccaagacgg gcgagcccat ccgcatcgaa gacgcgtatc gcgatgcgcg cttcgagcgc
     2101 gagtgggacc tgttgaccgg ctaccgcacg aacaacatgc tggccgcgcc actcaagaac
     2161 cacgtcggcc gcacgatggg cgtgattcag gtcttgaaca agcgcggcgg cgacggcttc
     2221 acgagcgacg acgaggacat cctgggcgcg ctcggcacgc aggccgcggt cgccatcgac
     2281 aattcgcgcc tcctgctctc gctgattcag aaaaatcagc agctgttcga aaccaaggag
     2341 caactcgagc gcaagttccg cgagctgtcg ctcttgttcg agctcgagcg cgcgacggcg
     2401 cgggcgacga gcgtcgacga gctcgcgctt gccacgctca cgcaggtcgc gacggcgtgc
     2461 aacgcgcgcg gcggagcgct cttgctcgcc gacgaagaga cgggcgatct cgtcgaacgg
     2521 cgcctcgatc gcgtcgcggc gagcggcctc gagcggcgcg cggccaaagc ggg
//
LOCUS       DATIML010001321         2515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5482858, whole genome shotgun sequence.
ACCESSION   DATIML010001321 DATIML010000000
VERSION     DATIML010001321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2515
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5482858"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VLJ38_22705"
     CDS             complement(<1..241)
                     /locus_tag="VLJ38_22705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42418.1"
                     /translation="MSNAAPEAATDIPGRRFILGVAVFSAVAMVAYWVVWFGVDRELL
                     ASAHTESYYAFENAFPLADAWIVMASIGASVALARR"
     gene            complement(362..1177)
                     /locus_tag="VLJ38_22710"
     CDS             complement(362..1177)
                     /locus_tag="VLJ38_22710"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSU42419.1"
                     /translation="MKRATYIAGIAQAQRVARDAILTVAASVRPGETERAVCARIEHE
                     LALAKVRHWLHTPYAWWGERTRFDWRGMWELEALPSERMLEEGEPFVLDVAPIVGGFP
                     ADFAYSGLAGPAAPERASEHRELLDELVRLKQELVTWARPGALAADVCREVEQSIASA
                     NLDVIHTRYPANVLAHTLEGFPNFSSRAPRIGTGFQLPLLLTYATGIVLHHVVGMPYP
                     FLRARAPGRARGLYAVEPHLGKNGCGAKFESVLLIDGDETRWLDPGLFGEVVG"
     gene            complement(1174..1959)
                     /locus_tag="VLJ38_22715"
     CDS             complement(1174..1959)
                     /locus_tag="VLJ38_22715"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSU42420.1"
                     /translation="MGIALVTGASSGIGRELARLFARDGHGVVLVARRRERLDELARE
                     LESKHGVKAWPIACDLAATGGVERLLSDLGSLGLGVDYLVNNAGVGTTGAFAESDPLA
                     EAGMAELNVVAVVRLTRALLTGMLARGQGRVLNIGSTAGFQPGPYMATYYASKAFVNH
                     FSEALAYELRGSGVTVTLYCPGPTHTEFGQVSGVLESRLFQLQVASAESVARGAYGAL
                     TSGRVLAVHGLLNRVVVMLVRLGPRAWVRAIVASLNRPARSGR"
     gene            2118..>2515
                     /locus_tag="VLJ38_22720"
     CDS             2118..>2515
                     /locus_tag="VLJ38_22720"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HSU42421.1"
                     /translation="MAEPKRSRRGLIVVLVLAVGGAFAYRAFDRPPQTVTLTGVVTTD
                     DVVVSPLVTARLDKLLVKEGDSVKPGQLVAVLAPGELAAESEFFTHSAQGFSGQIEEN
                     AAALRYQELQTGQQIRQAQATLAAVEAQKA"
BASE COUNT          423 a          849 c          882 g          361 t
ORIGIN      
        1 gacgccgcgc gagcgcgacg ctcgccccga tgctcgccat tacgatccag gcgtcggcga
       61 gcgggaacgc gttctcgaac gcgtagtacg attcggtgtg tgccgaggcc aggagctcgc
      121 gatcgacgcc gaaccagacg acccagtacg caaccatagc gaccgcgctg aacacggcca
      181 cgccgaggat aaagcgcctt ccgggaatgt ccgtggccgc ctcgggtgca gcgttactca
      241 tgcggttgca ctctgtgccc gaagcacgtc tcgatgcact ggcgcacgaa gcccaggatc
      301 ccgaggaaga cgatccgaac gtcttcgcga aaggggctgc ggcggcgcac gatcgagccc
      361 ttcaaccgac gacctcgccg aacaggcccg gatcgagcca gcgcgtctcg tcaccgtcga
      421 tgagcagcac ggattcgaat ttggcgccgc agccgttctt tccgaggtgc ggctcgacgg
      481 cgtagaggcc gcgcgcgcgg ccgggcgcgc gcgcacgcaa gaacgggtag ggcatgccga
      541 cgacgtggtg gagcacgatg cccgtcgcgt aggtgagcag cagcggcagc tgaaagccgg
      601 tgccgatgcg cggcgctcgc gagctgaaat tcggaaatcc ttcgagcgtg tgggcgagga
      661 cgttcgcggg gtagcgggtg tggattacgt cgaggttcgc cgaggcgatc gattgttcga
      721 cctcgcggca cacgtcagcc gcgagcgcgc cgggcctcgc ccaggtgacg agctcttgct
      781 tcagccgtac gagctcgtcc aggagctcgc ggtgttcgct cgcgcgttcg ggcgcggccg
      841 ggcctgctag gccggaatac gcgaaatcgg cagggaatcc gccgacgatc ggcgctacgt
      901 cgaggacgaa cggctcgcct tcctcgagca tgcgctcgct cgggagcgcc tcgagctccc
      961 acatgccgcg ccagtcgaag cgggtacgct caccccacca ggcgtacggc gtgtgcagcc
     1021 agtgccggac cttggcgagc gcgagctcgt gttcgatgcg ggcgcagacg gcgcgttcgg
     1081 tttcgcccgg ccgcacgctc gcggcgacgg tgaggatagc gtcgcgcgcg acgcgctgag
     1141 cctgggcgat accggcgatg taggtcgcgc gcttcatcgc ccgctcctgg cagggcggtt
     1201 gagcgacgcc acgatggcgc gcacccacgc gcgcggaccc agccgcacga gcatgacgac
     1261 gactcggttg agcaagccgt gcaccgcgag cacgcgtccg ctcgtgagcg cgccgtaggc
     1321 gccgcgggcg acgctctccg cgctcgcgac ctggagctga aagagcctcg actctagaac
     1381 gcccgagacc tgcccgaact cggtatgggt cgggccgggg cagtacaatg tcaccgtgac
     1441 gccggagccg cggagctcgt aggcgagcgc ttcgctgaag tgattcacga aggctttgga
     1501 ggcgtaatac gtggccatat agggaccagg ctgaaaacca gccgtggagc cgatgttcag
     1561 gacgcgacct tggccgcgag cgagcatgcc cgtcaagagc gcgcgcgtga ggcgtacgac
     1621 ggctacgacg ttgagctcgg ccatcccggc ttccgccaac ggatcgctct cggcgaacgc
     1681 gcccgtcgtg ccgacgcccg cgttgttcac gaggtagtcc acgccgagtc cgagcgagcc
     1741 gaggtcgctc agcagtcgct cgactccgcc cgttgcggcg agatcgcacg cgatgggcca
     1801 cgccttgacg ccgtgcttcg attcgagttc gcgcgcgagc tcgtcgagcc gttcgcgacg
     1861 gcgcgcgacg agcacgacgc cgtgcccgtc ccgggcgaag aggcgcgcga gctccctgcc
     1921 gatcccggaa gacgcgccgg tgacgagagc gatacccacg gcggcgctga agctagcacc
     1981 gacgtgccgc cccgcggatc gtgatttgcg gccggaccgg gcgagcggcg cccaatcgac
     2041 tcgagcccgg ccgcggcgcg cccgcgcgcg gcggtgcttg acgattcaaa caagtgtttt
     2101 atacaggcgt ttgacccatg gccgaaccca agcgctcccg gcgcggactc atcgtggtac
     2161 tcgtgctcgc ggtgggcggc gccttcgcct atcgagcttt cgaccgcccg ccgcagacgg
     2221 tgacgctcac gggcgtcgtc acgacggacg atgtcgtcgt cagtccgctc gtcacggcgc
     2281 gactcgacaa gcttctggtg aaggaagggg acagcgtcaa gccgggccag ctcgtcgccg
     2341 tgctggcccc gggcgagctc gccgccgaaa gtgagttctt cacccacagc gcgcagggct
     2401 tctcgggaca aatcgaggag aacgccgccg cgctgcgcta tcaggagctc cagaccggcc
     2461 agcagatccg gcaggcccag gcgacgctcg ccgccgtaga agcgcaaaag gccga
//
LOCUS       DATIML010001322         4138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1146697, whole genome shotgun sequence.
ACCESSION   DATIML010001322 DATIML010000000
VERSION     DATIML010001322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146697"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..1028
                     /locus_tag="VLJ38_22725"
     CDS             30..1028
                     /locus_tag="VLJ38_22725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42422.1"
                     /translation="MAESFAMEEEIEVGTERVIDGRLRVYYDGYWIKAYPVPADTLLK
                     KRRLIEALTRRLFNHVEHGINVPGERLEEARAAYDNESVPERRRVKAAMLAGALFNRA
                     ADIFQKLVELQKLGVIVNSDNALMKQCGQHLTEALDLGRMVLHRSGDEGIDELWGEPF
                     KAFAFPIQEFYKSRYLKIALTMRTIDRLASELSDALGAWPVFSGIEPLIFEYAAAARV
                     KCETLRTDVDVFETWTTFVVAGEKLAYFEPRWVSTPSPLESELAMVGRSLVRRGKELI
                     ADMARARVPMPKSTGDLVDALAQHRAFCAAATTRRPGASFASEPPRPAVPLAPARG"
     gene            complement(952..2541)
                     /locus_tag="VLJ38_22730"
     CDS             complement(952..2541)
                     /locus_tag="VLJ38_22730"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU42423.1"
                     /translation="MASGAREDDGDRTLREDVARAETALKASEERFRTVVHGAPDGVA
                     ILRGPTILYLNPRAARLLGLPRPEDGYGRRITDFIHPDDQAVAATRIRDLLQSGMPHE
                     APHEYRSRSRNGRELVIEISSILIDFDGGPAVLAFARDVTERKAMQARLAQADRLAAL
                     GMLSAGVAHEINNPLAYVLLNLELLSRELVKDEPAPRAALVARLEEARHGAERVARIV
                     RDLKTFAREDQGVRWPVELEAVLDAALSAVGGELEKRGRVTRSYGQIPTVEGIAARLE
                     QVFVNLLLNAAQALPEGDPEHHEVRVSASHDSEWIYVKVRDTGAGMTDEIQRRIFDPF
                     FTTKAPGGGTGLGLPICQGIVGAHGGTLEVASAPGAGSTFTVKLRRFQGGQSTRPVES
                     LAPPSPRGHILIVDDDATVARTLSLALEQDHNVTVVTSGPDALAALRAAPRERNFDAV
                     LCDLLMPGMTGAELFAIARAELPRVAERFIFMSGGYWAGSDKSHTGRQPVLEKPFNLE
                     QVRAALRDVVARSQSSPPDVE"
     gene            2615..3301
                     /locus_tag="VLJ38_22735"
     CDS             2615..3301
                     /locus_tag="VLJ38_22735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42424.1"
                     /translation="MRTAQLGALVFTAFALVACGSQRTAAVAPRTAPPAGQAAALPAL
                     EPVNAVARHVGDFNVHVVSGSFRKRPALLTERVVAREDETWVIEYKLEDDEGARSLRI
                     WSDPNGDVTRVAVLVDGEEQPGTLTDYETFMASASLAPDENVGLTASTKGTCMVGPSE
                     LDCETKNYRVMLGEQEANLGITESHAVPGVDLAGEITAPDGTVIYRAVLVEHGNAANA
                     GDASFALGEP"
     gene            complement(3308..>4138)
                     /locus_tag="VLJ38_22740"
     CDS             complement(3308..>4138)
                     /locus_tag="VLJ38_22740"
                     /inference="COORDINATES: protein motif:HMM:NF006719.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HSU42425.1"
                     /translation="SEICVSSPTWENHRAVFEAAGMKVNEYPYYDPETRGLAFGKMTA
                     ALRQLPAAGIVLLHACCHNPTGVDLDRGQWQELTGIFKQQNLVPFIDLAYQGFAEGIE
                     QDAFAVRTFAESGVPVVVASSFSKSFSLYRERVGAVTLVTANADEAKRAASQLKRVIR
                     TSYSNPSSHGAQVVALILGDAELRASWEAELAEMRERILRMRSLFVQKLGAKQHARDF
                     SFVEKQRGMFSYSGLDLPRVQRLRTEFGLYIVDSGRMCVAAMNENNIDYITDAIAKVV
                     "
BASE COUNT          686 a         1384 c         1415 g          653 t
ORIGIN      
        1 cgagagctcc agccacgcga gcgtgctcaa tggccgaaag cttcgccatg gaagaagaaa
       61 tcgaagtcgg caccgagcga gtgatcgatg gacgcctgcg cgtctattac gacggctact
      121 ggatcaaggc gtatccggtg cccgccgaca cgctgctcaa aaagcggcgg ctgatcgagg
      181 cgctcacacg gcgtctcttc aatcacgtcg agcacggcat caacgtgccg ggcgaacggc
      241 tcgaggaggc gcgcgccgcc tacgacaacg agagcgtgcc cgagcgccgc cgcgtgaaag
      301 cggcgatgct cgcgggcgcg ctcttcaacc gcgccgccga tatcttccag aagctcgtcg
      361 aactgcaaaa gctgggcgtg atcgtgaaca gcgacaacgc gctcatgaag caatgcgggc
      421 aacatctgac cgaggcgctc gacctcgggc gcatggtcct gcaccggagc ggcgacgagg
      481 gcatcgacga gctctggggg gagccgttca aagccttcgc ctttccgatc caggagtttt
      541 acaagagccg ctacttgaaa atcgcgctca cgatgcgcac catcgatcgg ctcgcgagcg
      601 agctttcgga cgcgctcgga gcgtggccgg tgttctcggg tatcgagccg ctgattttcg
      661 aatacgcggc ggccgcgcgc gtgaagtgcg aaacgctgcg taccgacgtc gatgtgttcg
      721 aaacctggac gacgttcgtg gtcgcgggcg aaaagctcgc ctacttcgag ccgcgctggg
      781 tgtcgacgcc gtcgccgctc gagagcgagc tcgcgatggt cggtcgttcg ctcgtgcggc
      841 gcggcaagga gctcattgcc gacatggcgc gcgcgcgcgt tccaatgccg aagagcacgg
      901 gggacctcgt cgatgcgctc gcgcaacacc gtgccttttg cgcggcggcg actactcgac
      961 gtccgggggc gagctttgcg agcgagccac cacgtcccgc agtgccgctc gcacctgctc
     1021 gaggttgaac ggcttttcga ggacgggctg gcggccggtg tgagacttgt cgctgcccgc
     1081 ccagtaaccg cccgacatga agatgaagcg ctccgcgacg cgcggcagct cggcgcgtgc
     1141 gatggcgaag agctcggcgc ccgtcatgcc gggcatgagc agatcgcaga gcacggcgtc
     1201 gaaattgcgc tcgcgcggcg cggcccggag cgccgcgagc gcgtcggggc cgctcgtgac
     1261 gacggtgacg ttgtggtcct gctcgagcgc gaggctcagc gtgcgggcca cggtcgcgtc
     1321 gtcgtcgacg atgagaatgt gaccacgcgg cgaggggggc gcgagcgact ccacggggcg
     1381 agtgctttgc ccgccctgga aacgccggag cttcacggtg aacgtgctgc ccgcgcccgg
     1441 tgcgctcgcc acctcgagcg tgccgccgtg cgctccgacg atgccctgac aaatcggtag
     1501 gcctaggccc gtgccgccgc ccggcgcctt ggtcgtgaaa aacggatcga agatgcgccg
     1561 ctggatctcg tccgtcatgc cggcgcccgt gtcgcgcacc ttcacgtaga tccactcgga
     1621 gtcgtgactg gcgctcaccc tgacctcgtg atgctcgggg tcgccctccg gcagcgcttg
     1681 agcggcattc aacagcaaat tgacgaacac ctgctcgagg cgagcggcga tgccctcgac
     1741 ggtcgggatt tgaccgtaac tgcgcgtgac gcggccgcgc ttttcgagct cgccgccgac
     1801 ggcgctcagc gccgcgtcga gtacggcctc gagctcgacg ggccagcgca cgccctgatc
     1861 ctcgcgcgca aatgtcttca aatcccggac gatcctcgcg acgcgctcgg cgccgtgacg
     1921 cgcctcttcg agccgcgcga cgagcgccgc gcgcggggcc ggctcgtctt tgacgagctc
     1981 gcggctcaag agctcgagat tcaagagtac gtaagcgagc ggattgttga tctcgtgcgc
     2041 gacgcccgcg gagagcatcc cgagcgccgc gagccgatcg gcttgcgcga ggcgcgcctg
     2101 catcgccttg cgctcggtca cgtcgcgcgc gaaggcgagc acagcgggcc ccccgtcgaa
     2161 gtcgatgagg atcgagctga tctcgatgac caactcgcgg ccgttgcggg agcgagagcg
     2221 gtactcgtgg ggagcttcgt gcggcatgcc ggattggagc aggtcgcgaa tgcgcgtggc
     2281 ggcgacggcc tggtcgtcgg gatggatgaa gtccgtgatg cggcgcccgt agccgtcctc
     2341 gggccgcggg agtcccagca ggcgcgctgc ccgcggattc aggtagagaa tggtggggcc
     2401 gcgtaggatt gccacgccgt cgggcgcgcc gtgcacgacc gtgcgaaagc gctcttccga
     2461 ggctttcagc gcggtttcgg cgcgcgccac gtcttcgcgc agcgtccgat cgccgtcgtc
     2521 ctcacgcgct ccactcgcca tccaggtacc gagcgtaaca cgagcatccg ttcgaaactt
     2581 ggccgttcgg cccccgacgt gcgaagcgct cggcatgcgc acagctcagc ttggggctct
     2641 cgtcttcacg gcgttcgcgc tcgtcgcgtg cggctcgcag cgaacggcgg cggtagcgcc
     2701 ccgcaccgcg ccgcccgcag ggcaggccgc cgcgctaccc gcgctcgaac ccgtcaacgc
     2761 ggtcgcgcga cacgtcggtg atttcaacgt gcacgtcgtg agcggcagct tccgtaaacg
     2821 cccggcgctg ctcaccgaac gcgtcgtggc tcgcgaggac gaaacctggg tgatcgagta
     2881 caagctcgag gacgacgaag gcgcgcgctc gctgcgcatt tggagcgacc cgaacgggga
     2941 cgtcacgcgc gtggccgtgc tcgtcgacgg cgaggaacag ccgggaacgc tcaccgatta
     3001 cgaaacattc atggcctccg ccagccttgc gcccgacgag aacgtcgggt tgaccgcgag
     3061 cacgaagggc acctgcatgg tcggcccgtc cgagctcgac tgcgagacca agaactaccg
     3121 cgtcatgctc ggcgaacagg aggcgaatct cggtatcacc gagagccacg ccgtgccggg
     3181 cgtcgatctc gcgggcgaga tcacggcgcc cgacggcacc gtgatctacc gcgcggtgct
     3241 cgtcgagcac ggcaacgccg ccaacgccgg cgacgcgtcc ttcgcgctcg gcgagccgtg
     3301 acccgcctta caccaccttc gcgatcgcgt cggtgatgta gtcgatgttg ttctcgttca
     3361 tggcggccac gcacatgcgg ccgctatcga cgatgtagag cccgaattcg gtgcgcagcc
     3421 gctgcacgcg cggcagatcg agccccgagt acgagaacat gccgcgctgc ttctcgacga
     3481 acgagaaatc gcgcgcgtgc tgcttggcgc cgagcttttg cacgaacagc gagcgcatgc
     3541 gcaaaatgcg ctcgcgcatc tccgcgagct ccgcttccca gctcgcgcgg agctcggcgt
     3601 cgccgagaat cagcgccacg acctgcgcgc cgtgcgagct cgggttcgag tagctcgtgc
     3661 ggatgacccg cttgagctgc gaggccgcgc gcttcgcctc gtcggcgttg gccgtgacga
     3721 gcgtcaccgc gcccacgcgc tcgcggtaga gcgaaaacga cttcgagaac gagctcgcga
     3781 cgacgacggg aacgcccgac tcggcgaacg tgcgcacggc gaaggcgtcc tgctcgatgc
     3841 cttcggcgaa gccctgatac gcgagatcga tgaagggcac gaggttctgc tgcttgaaga
     3901 tcccggtgag ctcctgccat tggccgcgat cgagatcgac gcccgtcgga ttgtggcagc
     3961 aggcgtggag cagcacgatg cccgccgctg gcagctgccg gagcgctgcc gtcatcttgc
     4021 cgaaggcgag tccgcgcgtc tccggatcgt aatagggata ctcgttgacc ttcatgcccg
     4081 ctgcctcgaa cacggcgcgg tggttttccc aggtcggcga gctcacgcaa atctccga
//
LOCUS       DATIML010001323         3065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3745465, whole genome shotgun sequence.
ACCESSION   DATIML010001323 DATIML010000000
VERSION     DATIML010001323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3745465"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VLJ38_22745"
     CDS             <1..560
                     /locus_tag="VLJ38_22745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42426.1"
                     /translation="AARSTPPQIVYGTALLERGDDASRFFLLVRALKQIQARAATLAR
                     TVPTDLGPVVAGFLSALADYNPEGVDPKRLAEAQKRVKSAIGKSLGNDVPMLALEVVG
                     SLGSRASQLATALNQWANRVALLAVGSPLTALRALALASNAELPAEGPERLRWLGRHA
                     EARDLAIFSVTEAYVEARKRLGVGG"
     gene            608..1048
                     /locus_tag="VLJ38_22750"
     CDS             608..1048
                     /locus_tag="VLJ38_22750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42427.1"
                     /translation="MSRLTKCPGPLVAALELLLLAGCSGSSSDIICGGAAAPAELHLS
                     GVTPELGSAAANADIVHSFSVLDNVGFEKLMLTYAPAHTAGASDPALSFQPGAGTNTY
                     TAAAVTWETAPAHVELDSEAIYQTPDGCAYRLPTPLFSYDLEAP"
     gene            complement(1134..2438)
                     /locus_tag="VLJ38_22755"
     CDS             complement(1134..2438)
                     /locus_tag="VLJ38_22755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42428.1"
                     /translation="MRTTLDRVRANRTSAPPVERPPELPLPPVRLRFLLLLALGAACV
                     SWLYPRFDAAWKVHTLAPALADYGACMVGPTGPALLRDRQLGEFHALVRRRLVTALAA
                     DAPFERCAPFALSITQDAAIERAHHAQAFTFAEYGATARAPHALGELAVTPEPVVEQA
                     RKAWPIVRGYAALVKPSLGVKEAPHPVAPASPALGRGLTPARAYYRVARATPDGIIFA
                     RGAGANLEVFRSSDGGASFRSAPSALAKDFAERCPLGGDGRAFVLRGDGDATNVVSVG
                     PNGDVSAAGLAKSGESVLAVACDERGLVAALRPEHATRAVLEQCTFGGPCVALPAPSL
                     GRVELGLDYPLDLARVAGTTVLALKMGNLVRVTSSRDGGASWAPLAVAYDGGEYPLPP
                     ARMPTELLAVGRRVLLHGSAVRPNDTYGLLYSDDQGASFRGR"
     gene            complement(2546..2794)
                     /gene="rpsU"
                     /locus_tag="VLJ38_22760"
     CDS             complement(2546..2794)
                     /gene="rpsU"
                     /locus_tag="VLJ38_22760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012234386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HSU42429.1"
                     /translation="MANPSEPVQCKPLEVQVGDKGIERAIKHLKRKMAAEGILRELKR
                     RRHYMKPSIKRRKKMSEAARRRRKRLRTDDMPPRGGML"
BASE COUNT          489 a         1098 c         1033 g          445 t
ORIGIN      
        1 tcgcggcccg ctcgactccg ccgcaaatcg tctacggcac ggccctgctc gaacgcggcg
       61 atgacgcgag tcgtttcttc ttgctcgtgc gcgccctcaa acagattcag gctcgcgcgg
      121 cgacgctcgc gcgcaccgta cccaccgatc tcggacccgt ggtcgccggt tttctgtcgg
      181 cgctcgccga ctacaatccc gaaggcgtcg atccgaagcg tctcgcggaa gcacagaagc
      241 gcgtgaagag cgccatcggc aagtcgctcg gcaacgatgt accgatgctc gcgctcgagg
      301 tcgtcggcag tctcggcagc cgcgcgagtc agctggcgac ggcgctcaac caatgggcga
      361 accgggtggc gctgctggcc gtcggttcgc cgctcacggc gctacgcgcg ctggcattgg
      421 caagtaacgc cgagcttccc gccgaagggc ccgaacggct gcggtggctc ggacgccacg
      481 ccgaggcgcg cgatctcgcc atcttcagcg tgacggaagc gtacgtcgag gcccgaaaac
      541 ggctcggcgt cggcggctga cccggcgccc cctgtcctcg cgtggctcgt gctacggacg
      601 cgcagccatg tccagactga cgaagtgccc ggggccgctg gtcgccgcgc tcgagctgct
      661 gctcctcgcc ggctgctctg ggagcagcag cgacatcatt tgcggcggcg cggcggcacc
      721 cgccgagctc cacctctcgg gcgtgacgcc cgaactcggc tcggccgccg ccaatgcgga
      781 catcgtccac tccttttccg tcctcgataa cgtcgggttc gagaaactga tgctcacgta
      841 cgcgccggcg cacaccgcag gcgcctcgga tccagccctt tcgttccaac ccggcgcggg
      901 cacgaacacc tacaccgccg ctgccgtgac gtgggaaacg gcgcccgcgc acgtcgaact
      961 cgactccgag gcaatctacc aaacacccga cggctgcgcc tatcgcctac cgacgccgct
     1021 cttttcgtac gacctcgaag cgccgtgacg cccggcgccg cgcctcgaag cgcggtgacg
     1081 ccgtgacgcc gtgacgtgtg acgccgtgac gcgcatgacg cgcgccctcg agcctaacgc
     1141 ccgcgaaaac tcgcgccctg atcgtcggag tacagcaaac cgtacgtatc gttcggcctg
     1201 acggcgctgc cgtgcagcag cacgcggcgc cccaccgcca agagctcggt cggcatgcgg
     1261 gctggcggca gcggatattc gccaccgtcg taggcgactg ccagcggggc ccagctggcg
     1321 cccccgtcac gcgatgaagt cacgcgcacg aggttaccca tcttgagcgc gagcacggtc
     1381 gtgcccgcga cgcgcgccaa gtcgagcggg tagtcgaggc cgagctcgac ccggccgaga
     1441 ctcggcgctg gtagcgccac gcagggcccc ccgaacgtgc actgctcgag cacggcgcgc
     1501 gtcgcgtgtt cgggccggag cgccgcaacg agcccgcgct cgtcgcaggc gacggcgagc
     1561 acgctttcgc ccgacttggc gagtccggct gcgctcacgt ccccgttcgg gccgaccgag
     1621 acgacgttcg tcgcgtcacc gtcgccgcgc agcacgaatg cgcgtccgtc gccgccgagt
     1681 ggacagcgct ccgcaaagtc cttggcgagc gccgacggcg ccgacctgaa gctcgctccg
     1741 ccgtcgctgc tgcggaacac ctcgagattc gcgccggcgc cgcgcgcgaa gatgatgccg
     1801 tcgggcgttg cgcgcgccac gcgatagtaa gcgcgtgccg gcgtgagccc gcggccgagc
     1861 gcgggactcg ccggcgcgac cggatggggc gcttccttca cgccgagcga cggtttgacg
     1921 agcgccgcgt agccgcgcac gatgggccaa gccttgcgcg cctgctcgac cacgggctcg
     1981 ggcgtgacgg cgagctcgcc gagcgcatgc ggggcccgcg ccgttgcgcc gtactcggcg
     2041 aacgtgaacg cttgagcgtg gtgtgcgcgc tcgatcgcgg catcctgggt gatcgagagc
     2101 gcaaatggcg cgcagcgctc gaacggcgcg tcggcggcga gcgccgtgac gagccgccgg
     2161 cgcacgagcg cgtgaaactc accgagctgc cgatcgcgca agagcgccgg ccccgtggga
     2221 ccgaccatgc acgcgccgta atcggcgagc gccggcgcga gcgtgtgcac tttccaggcg
     2281 gcgtcgaacc gcgggtaaag ccagctcaca caggccgcgc cgagcgcgag caaaagcaaa
     2341 aacctgagcc ggacgggcgg gagcggcagc tccggaggac gctcgaccgg cggggcagag
     2401 gttcgattcg cgcgcacgcg atcgagcgtg gtccgcattc acccgaatct acggaccgcg
     2461 cggcgcgcgg ccaagaaaca cgctcgaaca gcagcggccg cgccggcgtc agcggagacg
     2521 gccggcgcgc gcgctcaccg cgagctcaaa gcatgccgcc gcgcggcggc atatcgtccg
     2581 tgcgcaagcg cttgcgacgg cgacgagcgg cttcgctcat cttcttcctg cgcttgatcg
     2641 acggcttcat gtagtggcgg cgacgcttga gctcccgcag gatgccttcg gcggccattt
     2701 tgcgcttgag gtgcttgatg gcacgctcga tgcccttgtc ccctacttgg acttcgagcg
     2761 gcttacactg gacgggttcg ctgggattcg ccaagagagg gccttattga catgacccgg
     2821 cacgcagggc aaccgaatct cgcctttaca gtgcgacccg agctctgaaa gatgaacccc
     2881 gtgaccagta gctcgcgcga gcggccgacc aacgtttctg ccccccacgg agcccgtgtg
     2941 ctcgagatca gctggggcga cggcaagaga atcgcatatc cacatgaaat cattcgtgga
     3001 ttttgcccat gtgccacctg ccagggccac tcgggcacga tccgcttcgt cgaaggcggg
     3061 gatct
//
LOCUS       DATIML010001324         4947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1728475, whole genome shotgun sequence.
ACCESSION   DATIML010001324 DATIML010000000
VERSION     DATIML010001324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4947
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1728475"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..1732
                     /locus_tag="VLJ38_22765"
     CDS             194..1732
                     /locus_tag="VLJ38_22765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HSU42430.1"
                     /translation="MHRLRAQALAAASLSLGLLVPARGWAASLTQVNRSDWAGSVKLP
                     SYVQMYIYVPDKLAAKPPIMVSSHSCGSTATGQMGNIPLSTAAADKNGFILILPDNPG
                     QNCWDVGSAASLKHDGGGDTQAVAQMVKYTLMKYNGDPARVYAMGGSSGAMMTQALMA
                     VYPDVFRAGSARAGVPAGCWADGYDSSMQWSNNCAGGNTTKTAQQWGDLVRAMDPGYT
                     GHRPRLQTMQGEADQTISYKNTAEAVKEWTNVLGLSTTPTSSDKGYKAASATYDRQFW
                     QNACGYVVFETWSSPGGTHSMAYEEADILKFFGLDTAGGTDPEPDCPAGGGSGGMGGA
                     PGSGGRSNAGGSSATGGAVGSGGRAAQGGMSGTASGAGGTAPASGGATATGGSVGSGG
                     RNNGTGGSGIGLGGMLGTSTGGSLSTGGTGVTGGTGATGGTGGSTSATGGQPGSGGGV
                     STGGSSTTGAAGKTSHGSGGSEPGSDSGGCSVVSGDVKSRHNYAAGFALGLALFAFRR
                     RARR"
     gene            complement(1747..2157)
                     /locus_tag="VLJ38_22770"
     CDS             complement(1747..2157)
                     /locus_tag="VLJ38_22770"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSU42431.1"
                     /translation="MSSAADRVWNALVAVVMDTRGDWRRRVSEATGLSFGRLRALKRL
                     NEKPLALKELAESMGVDAPAATVAVNALEQRGLVVRTPHPTNGRVKLVSLTPAGRATL
                     ARVKTVVEHAPLPFASLSPRELAALERALERFKK"
     gene            complement(2154..3563)
                     /locus_tag="VLJ38_22775"
     CDS             complement(2154..3563)
                     /locus_tag="VLJ38_22775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSU42432.1"
                     /translation="MVLAICCMSLLLVSMDVTIVNVALPAIRRDLRATTAGLQWVIDA
                     YTLVLASLLMLSGSIADRFGRRRVFQFGLTLFTAASALCSLAPTLGVLVACRMLQAVG
                     ASMLNPVAMSIITNVFIEPKARARAIGTWGAVVGVSMGLGPLIGGALTQAVSWRSIFW
                     VNVPDGVLALVLAQLFVPVSKAPRARRADPVGQLLMLGALSAVTYAVIEGPALGWDSP
                     FILGLFVGTAVLVTALLAYEPRLEEPLLDLRFFRSVPFSSAALVAVLAFGTFSGFLFL
                     NALYLQEVRGLPAFTTGLYTLPLALATVVCSPISGWLIGRSGTRTPLFLAGGGIALSA
                     LLLATLDARTPLSLVLLAYVVFGIGFGLVNAPITNTAVSGMPRARAGLAAAIASTSRQ
                     VGASLGVAIGGTMAQGRHGAAGELTGAMHTFFAFAAGAGLCIVALGALSNSAWGRETL
                     RRAAALIEEGDRPASGAVR"
     gene            3762..>4947
                     /locus_tag="VLJ38_22780"
     CDS             3762..>4947
                     /locus_tag="VLJ38_22780"
                     /inference="COORDINATES: protein motif:HMM:NF015836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42433.1"
                     /translation="MAASLLLELLVAYRSQGFYNCDEHFQVLEFMGLKLGTTSPAELP
                     WEFGAELRSWLQPALYYPFAKLFFALGGRDPFGLAWLLRTLSALVSFASLCAFGRCLR
                     RFLPDGAVRRGTLLALNFFYLVPVLGVRTSSENFSQAFLLFGLAALVEPGRFGTSLYP
                     PLASGEERDGRERAGVSWLMPSLWLAGACFGLAFLARYQAAALVAGGALWFLLRGRAP
                     RAFALGAGGGLVLVLLLGVVLDRWGYGHWVYAPWQYLSTNLLEDKASSFGRLPVWGFV
                     TLFATKLWPPFGLLWFAVFVLAAWRLPRHLLTWTVLPFVLMHHLIAHKEPRFLFPTLA
                     LSIVLAGLLVESLFEARGRGMRFRRTAHALGAALVGLNALGLFLYGLLPTHQRWTVLD
                     ELD"
BASE COUNT          790 a         1659 c         1744 g          754 t
ORIGIN      
        1 cagacgcgga tctgcgacta gcaggaactt tcaccgtacc aggctgagcc ctcgagcccg
       61 tgggcggggc tgtaagattt ccaggcggct gcgtctcgtc gagcgcgact gcaaataacc
      121 gcgagggagg cgtggttagc tgccgttgcg cgcccgtaac ttccgtggat aaggacgagg
      181 gaggtttacg gacatgcatc gacttcgtgc tcaggcgctc gcggctgcgt cgctctcgct
      241 ggggctgctc gtgcccgcgc gtggctgggc ggcctcactg acgcaggtca atcgctcgga
      301 ttgggcaggc agcgtgaagc tgccgagcta cgtccaaatg tacatctacg ttccggacaa
      361 gctcgcggcc aagccgccca tcatggtctc ttcccactcg tgtggatcga cggccacggg
      421 gcagatgggc aatatcccgc tgagcacggc ggccgcggac aagaacgggt tcatcctgat
      481 cctgccggac aaccccggcc aaaactgctg ggacgtgggc tcggcggcgt cgctgaagca
      541 cgacggcggc ggtgacacgc aggccgtcgc gcaaatggtg aagtacacgc tcatgaagta
      601 caacggcgat ccggcgcgcg tttacgcgat gggcggctcg tcgggcgcga tgatgacgca
      661 ggcgctcatg gccgtgtacc cggacgtctt ccgagccggc tccgcgcgcg ccggcgttcc
      721 agcgggatgc tgggctgacg gctacgactc gagcatgcag tggagtaaca actgcgcggg
      781 cggtaacacg accaagaccg cacagcagtg gggcgacctc gttcgcgcga tggatccggg
      841 ttacaccgga caccggccgc gcctgcagac gatgcagggc gaggcagacc agacgatcag
      901 ctacaagaac acggccgagg cggtcaaaga gtggaccaac gtgctcggcc tgagcaccac
      961 ccccacgtcg agtgacaagg gctacaaagc cgcgagcgcg acgtacgatc gtcagttttg
     1021 gcagaacgcc tgcggctacg tcgtgttcga gacttggtcg tcgcccggcg gcacgcattc
     1081 gatggcgtac gaggaagccg atattctcaa gttcttcggc ctcgacacgg cgggcggcac
     1141 cgatccggag cccgactgtc cggctggtgg cggcagcggc ggcatgggcg gcgcgccggg
     1201 ctcggggggc aggagcaatg cgggaggttc gagcgcgacg ggaggcgccg tgggttcggg
     1261 cggcagggcc gcgcagggcg gtatgagcgg caccgcgtca ggcgcgggcg ggactgcgcc
     1321 ggcaagcggc ggcgcgacgg cgacgggcgg cagcgtgggc agtggcggcc gcaacaacgg
     1381 cactggcggc agcggcattg gactcggcgg catgctgggc acgagcacgg gcggaagctt
     1441 gtccacgggc ggaaccggcg taacgggcgg aaccggcgcc acgggcggaa ccggcggcag
     1501 cacgagcgcg accggcgggc agccaggcag cggtggcggt gtgtcgaccg gcgggagcag
     1561 cacgacgggc gcggcgggca agacgtcgca tggctcgggc ggttcggagc ctgggtcgga
     1621 ttcgggcggc tgcagcgtcg tgagcggtga cgtgaagtcg cggcacaact acgccgcggg
     1681 gttcgcgcta gggctcgccc tcttcgcgtt ccgtcgtcgc gcgcggcgct gaagcacgcc
     1741 cgcgcgtcat ttcttgaagc gctcgagtgc ccgctcgagc gcggcgagct cgcgcggcga
     1801 gaggctcgcg aacggcagcg gcgcatgctc gaccacggtc ttcacgcgag cgagcgtcgc
     1861 gcgccccgcg ggagtcagcg aaacgagctt gacgcgtccg ttcgtaggat ggggcgtgcg
     1921 caccacgagg ccgcgctgtt cgagggcgtt cacggcgacc gtcgccgcgg gcgcgtctac
     1981 gcccatgctc tcggcgagct ccttcaacgc gagcggcttc tcgttcagcc gcttgagcgc
     2041 gcgcagccgt ccgaacgaaa gccccgtggc ctcgctcacg cggcgccgcc agtcgccgcg
     2101 cgtgtccatc acgaccgcga cgagggcatt ccacacccga tcggcagcgg aactcatcgg
     2161 accgctcccg aagcggggcg atcgccctct tcgatgagcg cggccgcgcg ccgcagggtc
     2221 tcgcggcccc acgcgctgtt cgaaagcgca ccgagcgcca cgatgcagag ccccgcgccc
     2281 gcggcgaacg cgaagaacgt gtgcatcgcg cccgtgagct caccggcggc gccgtgacgg
     2341 ccctgggcca tggttccgcc gatcgcgacg ccgagagacg cccccacctg acgactggtc
     2401 gaagcaatcg ctgccgcaag acctgcccgc gcgcggggca tgccggaaac ggcggtgttc
     2461 gtgatcgggg cgttcacgag tccgaacccg atgccgaaga cgacgtacgc gagcagcacg
     2521 agcgaaagcg gcgtccgtgc gtcgagggtc gcgagcagca gcgcgctcag cgcgatgccg
     2581 ccgccggcga ggaagagcgg cgtgcgggtg ccgctgcgcc cgatgagcca accggagatg
     2641 ggcgagcaca ccacggtcgc gagcgcgagc ggcagggtgt agagccccgt cgtgaacgcg
     2701 ggcagcccgc gcacctcttg caagtaaagc gcgttcagga acaggaaacc cgagaacgtg
     2761 ccgaacgcga gcacggccac gagcgcggcg ctcgagaagg gcacactccg gaagaaccgc
     2821 agatccaaga gcggttcttc gaggcgcggc tcgtaggcga gcagcgccgt cacgagcacc
     2881 gccgtgccca cgaacagacc gaggatgaag ggcgaatccc agccgagcgc cggcccctcg
     2941 atcaccgcat aggtcacggc cgaaagggcg ccgagcatca agagctggcc gacgggatcg
     3001 gcgcggcgcg cgcgcggcgc cttcgacacc ggcacgaaca gctgcgccaa tacgagcgcc
     3061 agcaccccgt cgggcacgtt cacccaaaag atcgaacgcc agctgaccgc ttgcgtgagc
     3121 gcgcctccaa tcagcgggcc aaggcccatc gagacaccga cgaccgcgcc ccacgtgccg
     3181 atcgcccgcg cgcgcgcctt gggctcgatg aacacattgg tgatgatcga catggctacg
     3241 gggttgagca tgctcgcgcc caccgcctgc agcatgcgac aggcgaccag cacgcccagc
     3301 gtcggcgcca agctgcacaa ggccgaagcg gcagtgaaca gcgtgaggcc gaactggaac
     3361 acgcggcgac gcccgaagcg atcggcgatc gaacccgaga gcatcagcaa gctcgcgagc
     3421 acgagcgtgt aggcgtcgat cacccattgc aagccggccg tcgtggcgcg cagatcgcgg
     3481 cgaatggccg ggagcgccac gttgacgatc gtcacgtcca tcgagaccaa gagcaggctc
     3541 atgcagcaaa tggccaggac caagccggga cgcgtcttcg ttgggctcac cacgaccatt
     3601 gtgagcccac aacagttgta tgtcaacaat ggtgacgccg cgagcggcct gttgtaagcc
     3661 tgcgcgccgt gacggaccga gcagcgaagc caacctcgcg gagcgcgcgt gttcgcgcct
     3721 ggctcttcgc tgcgaattgg agcgcctttt ttcgtaccgt gatggcggct tcgctcctgc
     3781 tcgagctgct cgtcgcgtac cggtcgcaag gattttacaa ctgcgacgag catttccagg
     3841 tcctcgaatt catgggactg aagctcggaa cgacctctcc cgccgagctg ccgtgggagt
     3901 tcggggccga gcttcgctcc tggctgcagc ctgcgctcta ctatccgttc gcgaagctgt
     3961 tcttcgcgct cggcgggcgg gacccgttcg ggctcgcgtg gctcttgcgc accctgtcgg
     4021 cgctcgtgag ctttgcctca ctctgcgcgt tcggtcgttg cctgcgacgc ttcctcccgg
     4081 acggcgccgt ccggcgcgga acgctgctcg cgctgaactt cttttatctc gtgcccgtgc
     4141 tcggcgtgcg cacaagctcg gagaatttct cgcaagcgtt cttgctcttc ggcttggccg
     4201 cgctcgtgga accgggccgc ttcggaacgt cgctctatcc gccgctcgct agcggcgagg
     4261 agcgcgacgg gcgcgagcgc gcgggtgttt cctggctcat gccctcgctc tggctcgcgg
     4321 gcgcgtgctt cgggctcgcg tttctggcgc gttatcaggc cgcggcgctc gtcgccggtg
     4381 gagcgctctg gttcttgctg cgtgggcgcg cgccgcgagc cttcgcgctc ggcgccggcg
     4441 gcgggctcgt gctcgtgctc ctgctcggcg tcgtgctcga tcgctggggc tacggtcatt
     4501 gggtctacgc gccctggcag tacctcagca ccaatctgct cgaggacaag gcgtcgagtt
     4561 tcgggcgtct gcccgtgtgg ggcttcgtca cgctcttcgc cacgaagctc tggccgccgt
     4621 tcgggctgct ctggttcgcg gtgttcgtgc tcgcggcgtg gcggctgccg cggcacctgc
     4681 tcacctggac ggtgctgccg ttcgtgctga tgcaccacct gatcgcgcac aaggagccgc
     4741 gctttctgtt tccgacgctc gccctctcca tcgtgctcgc cggactgctc gtcgagtccc
     4801 tgttcgaagc gcgcggtcgt ggcatgcgtt tccggcgcac ggctcacgcg ctcggcgccg
     4861 ccctcgtcgg cctgaacgcc cttgggctct tcctctacgg cctcttgccg acgcatcaac
     4921 gctggaccgt gctcgacgaa ctcgacc
//
LOCUS       DATIML010001325         2056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4902662, whole genome shotgun sequence.
ACCESSION   DATIML010001325 DATIML010000000
VERSION     DATIML010001325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4902662"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..306)
                     /locus_tag="VLJ38_22785"
     CDS             complement(70..306)
                     /locus_tag="VLJ38_22785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42434.1"
                     /translation="MLEGLGFARFLLRVEGPASGLAGNFVGGVAAWDDRDLVCQDFEG
                     DPGLGFAQPGCLLSGFSEGEFALSFNAMDVCVHE"
     gene            complement(318..500)
                     /locus_tag="VLJ38_22790"
     CDS             complement(318..500)
                     /locus_tag="VLJ38_22790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42435.1"
                     /translation="MASPREYSSYQDFTREQIRPDMRIGWSTDELEHSGAEALDFDMD
                     PFEQALWQAEKDEEEE"
     gene            772..1536
                     /locus_tag="VLJ38_22795"
     CDS             772..1536
                     /locus_tag="VLJ38_22795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSU42436.1"
                     /translation="MPGPQIIAIANQKGGVGKTTTAVNLAASLAAAERRTLLVDMDPQ
                     GNASSGVGVPPGTAERTIYDALIGSATLADVLRTTKIETLDVAPSTQDLIGVEYELFD
                     HDRGTHLAALLRAPEIEKYDYVILDSPPSLGVLTLNVLVAAKRVIVPLQPEYYALEGI
                     TYLMATIDRVRGSLNAELVMEGIVLTMWDPRNRLAHQVADEVRRHFRVFDAIIPRNVR
                     LSEAPSHGLPALLYDAESKGAQGYLSLAREVIEGAA"
     gene            1533..>2056
                     /locus_tag="VLJ38_22800"
     CDS             1533..>2056
                     /locus_tag="VLJ38_22800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSU42437.1"
                     /translation="MTEPPKKPLRGLGRGLDALLPVRTTPSTPERPATDYGQGNVFSC
                     AIERIVPQRGQPRQHFEHAKLDELAESIKTHGLLEPLVVRRRGEGEFEIIAGERRWRA
                     AQRAGLREILVVVRDVSAKDAFELALIENVQREDLDPIEFAEALDRLVREHGYTQETL
                     AQRVGKDRSTIANAL"
BASE COUNT          374 a          727 c          637 g          318 t
ORIGIN      
        1 ggttacctgc atggggggcg cgaaaggtac ttgcgacggc caagccttgc cactgcaaaa
       61 gcacgcgaat cactcatgga cacagacgtc catcgcgttg aagctcagag cgaactcccc
      121 ctccgaaaaa cctgaaagca agcaaccggg ctgggcaaag cccagccccg gatcgccctc
      181 aaagtcttgg cagaccagat cacgatcgtc ccaagcagca actcccccca caaagttgcc
      241 ggcgaggccg gaggcagggc cctcaacgcg cagcaaaaat cgcgcaaacc caagaccttc
      301 cagcaacgcc ccacccttta ttcctcctct tcatccttct cggcctgcca caacgcctgc
      361 tcgaacggat ccatgtcaaa atccagcgcc tccgcgccgc tgtgctcgag ctcgtcggtg
      421 gaccaaccga tgcgcatgtc cgggcggatc tgctcgcgcg tgaagtcctg gtagctcgaa
      481 tattctcggg ggctcgccat ttccttgcgt ttcctctctg gcctaagact taccttttcc
      541 cacttagacc tacacctgcc cacaatgtag gccgagtgcg tcggccctcc aacaaacggg
      601 cacggccgcc tccccgagct gccgcgcttc gctaactgca caccgaacgg cggcggcgga
      661 gcaacgcgga aaacgccgtg cggagctcgc gcgcgaccag ccgggcttcc gtttggagta
      721 gtagcgaggt gatcgggggc gagagacgct actctcgcgc cttcgactcg catgcccggc
      781 ccacaaatca tcgcgatcgc caaccagaag ggcggcgtcg gtaagacgac gacggcggtg
      841 aacctcgccg ccagtcttgc cgccgccgag cgccggacgc tgctcgtcga catggatccc
      901 cagggcaacg cctcgagcgg cgtcggcgtg ccgccgggca cggccgaacg gaccatctac
      961 gacgcgctca tcggctcggc gacgctcgca gacgtactcc ggacgaccaa gatcgagacc
     1021 ctcgacgtgg cgccgtccac gcaagatctc atcggcgtcg agtacgagct cttcgatcac
     1081 gatcgcggca cgcacctcgc ggcgctcctg cgcgcgcccg agatcgagaa gtacgattac
     1141 gtgatcctcg attcgccgcc ctcgctcggc gtgctcacgc tcaacgtgct cgtcgcggcc
     1201 aagcgcgtga tcgtgccgct tcagcccgag tattacgcgc tcgagggcat cacgtacctg
     1261 atggcgacga tcgatcgcgt gcgcggttcg ctcaacgccg agctcgtgat ggaaggcatc
     1321 gtgctcacga tgtgggaccc gcgcaaccgt ctcgcgcatc aagtcgcgga cgaagtgcgc
     1381 cggcatttcc gcgtcttcga cgcgatcatc ccgcgcaacg tgcgcctgag cgaagcgccg
     1441 tcgcacggct tgcccgcgtt gctctacgac gcggagagca agggcgcgca gggctatttg
     1501 agcctcgcgc gcgaagtgat cgagggcgct gcgtgacgga gcccccgaag aagccgctgc
     1561 gcgggctcgg ccgcggcctc gacgcgctct tgcccgtgcg cacgacgccg tcgacgcccg
     1621 agcggccggc gaccgattac ggccagggca acgtcttttc ctgcgcgatc gagcgcatcg
     1681 tgccgcagcg cgggcagccg cggcagcact tcgagcacgc gaagctcgac gagctcgccg
     1741 agtcgatcaa gacgcacggc ttgctcgagc cgctcgtcgt gcggcggcgc ggcgagggcg
     1801 agttcgagat catcgcgggc gaacggcgct ggcgcgccgc ccagcgcgcg ggcctgcgcg
     1861 aaatcctcgt cgtcgtgcgc gacgtgtcgg cgaaggacgc cttcgagctc gcgctgatcg
     1921 aaaacgtcca gcgcgaggat ctcgatccga tcgagtttgc cgaagcgctc gatcggctcg
     1981 tgcgcgagca cggctacacc caggagacgc tcgcgcagcg tgtcggcaag gatcgctcga
     2041 ccatcgcgaa cgccct
//
LOCUS       DATIML010001326         1858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5768278, whole genome shotgun sequence.
ACCESSION   DATIML010001326 DATIML010000000
VERSION     DATIML010001326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5768278"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /locus_tag="VLJ38_22805"
     CDS             <1..1027
                     /locus_tag="VLJ38_22805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42438.1"
                     /translation="AAPKAKPLAPPPPARRSWRFPLIAALFGAALGLMTALKARAFGR
                     ACRARRALARPLALGAGLCAGSELEEPTLAVLGILLALALGTERAPKLERTPRGPGRW
                     LSLKDEDAFAPRLVRTPGALLDAGTLRGLALLAVVLAAVGALALGELGRSPFRAFLLA
                     LGGAAFVPIFFTGRGSELARDPVQFSRRFMRDLARSLRRRTEAKIVAWGRVPDGAADP
                     DELRVLVQPKDGIAGLVALETGLDAQRGLGGVVGVPFVIVRAKEGSRAQLALPRGVIW
                     ARGRKPDERVAILSPKLPTVGLTAALVERLLAELSAQAPSSRRMSSGSSAFTTKLGSV
                     RSPAHAT"
     gene            complement(937..>1858)
                     /locus_tag="VLJ38_22810"
     CDS             complement(937..>1858)
                     /locus_tag="VLJ38_22810"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSU42439.1"
                     /translation="SLLKTSEAFVVNAAEAGERLDRLVVRHVRALGRRQARELIESGQ
                     VTVDGRRARAGAPVASGSRIDVSLPDQTPEPEPGLPLDVRLEQSALLVVHKPASQPTA
                     PLGPGERGTLANALLGHYPELAGVGHRPREPGLLHRLDTETSGLLIVARTHAAFATLT
                     GALTGGRIDKRYLAISAVAGLPAFGEIEGALGPDPERRGRVRIVPDPSREYARAAKTR
                     YRVLQTSGGLTLLELEAKRAFRHQIRVHMASIGAPLVGDTLYGGAPWPDAGARHALHA
                     SHVAWAGDRTLPSFVVKAELPDDMRRLLGA"
BASE COUNT          211 a          673 c          690 g          284 t
ORIGIN      
        1 cgcggcaccc aaggcgaagc cgctcgcgcc gccgccgccg gcccgacgtt cttggcgctt
       61 tccgctcata gccgctctgt tcggcgccgc gctcggactc atgacggcac tgaaggcgcg
      121 cgcgttcggc agggcgtgtc gtgctcggcg cgcgctcgct cggccgctgg cgctcggcgc
      181 gggcctttgt gccggcagcg agctcgagga gccgacgctc gccgtgctcg ggattttgct
      241 cgccttggcg ctcggcaccg agcgcgcacc gaagctcgaa cgcacgccgc gtggccccgg
      301 tcgctggctg tcactcaagg acgaggacgc gttcgcgccg cggctcgtgc gaacgcccgg
      361 ggcgctcctc gacgccggca cgctccgtgg tctcgctctg ctcgcggtgg tcctcgcggc
      421 cgtcggcgcg ctggcgctcg gcgagctcgg gcgctcgccg tttcgtgcgt tcttgctcgc
      481 gctcggcggc gccgctttcg tgccgatctt cttcacgggg cgcggaagtg agctcgcccg
      541 cgaccccgtg cagttttcgc ggcgtttcat gcgagatctg gcgcggtcgc tccggcgccg
      601 gacggaagcg aagatcgtgg cgtggggccg cgtgccggac ggcgctgccg accccgacga
      661 actgcgggtg ctcgtgcagc cgaaggacgg catcgcggga ctcgtcgcgc tcgagaccgg
      721 actcgacgct cagcgcggcc tcggcggcgt cgtcggcgtg ccgttcgtga tcgttcgcgc
      781 gaaggagggc tcacgagcgc agctcgcgtt gccgcgcggc gtgatctggg cgcgcggtcg
      841 caagcccgac gagcgggtcg cgattctgag cccgaagcta ccgaccgtcg ggctcacggc
      901 ggcgctcgtc gagcgcctgc tcgccgagct ttcggctcag gcgccgagca gccgtcgcat
      961 gtcgtcgggc agctcggcct tcacgacgaa gctcggcagc gtgcggtcgc ccgcccacgc
     1021 gacgtgactg gcgtgcaagg cgtggcgcgc gccggcgtcc ggccaggggg cgccgccgta
     1081 aagcgtgtca cccacgagcg gcgcgccgat ggacgccata tgaacgcgga tttgatgccg
     1141 gaatgcgcgt ttggcctcga gctcgagcag cgtgagtccg ccgctcgttt ggaggacgcg
     1201 gtagcgcgtc ttggctgcgc gcgcgtactc gcgtgacggg tcgggcacga tgcgcacgcg
     1261 cccgcggcgc tcgggatccg gaccgagcgc gccttcgatc tcgccgaacg cgggcagccc
     1321 cgccaccgcg ctgatcgcga ggtagcgctt gtcgatgcgg ccgcccgtga gcgcgcccgt
     1381 gagcgtcgcg aaggctgcgt gcgtccgcgc cacgatgagt agccccgacg tctccgtatc
     1441 gagccggtgc aagagccccg gctcgcgcgg gcgatggccc acgccggcga gctcgggata
     1501 atggccgagc agcgcgttcg cgagcgtgcc gcgctcgccc gggccgagcg gcgctgtcgg
     1561 ctgcgacgcg ggtttgtgca cgacgagcag cgcgctttgc tcgagccgca cgtcgagcgg
     1621 caggcctggc tccggctccg gcgtctggtc cgggagcgac acgtcgatac ggctgccgct
     1681 cgcgacaggg gctccggccc gagcgcgccg gccgtcgacc gtcacttgcc cgctctcgat
     1741 gagctcgcgc gcttgccgcc gcccgagggc gcgcacgtga cgcacgacga gccggtcgag
     1801 ccgctcacct gcttcggcgg cattcaccac gaacgcttcg ctcgtcttca aaaggctc
//
LOCUS       DATIML010001327         8215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4903143, whole genome shotgun sequence.
ACCESSION   DATIML010001327 DATIML010000000
VERSION     DATIML010001327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 8215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8215
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4903143"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="VLJ38_22815"
     CDS             <1..365
                     /locus_tag="VLJ38_22815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42440.1"
                     /translation="LTHVPSPWTVAKLHPKNTTQGFLQTERLESGMSGSGLWDDGGRL
                     VGIAVGNDASSGYFAGSERIRQLLDLSPVRAPLKPVAPNAALWGDPALSVDDLIATAR
                     ARREHIETSLDRLERHDH"
     gene            complement(417..1148)
                     /locus_tag="VLJ38_22820"
     CDS             complement(417..1148)
                     /locus_tag="VLJ38_22820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42441.1"
                     /translation="MISRRAASEFPNDNPELHDGIVWSCPEPCAPPLPTLRLRKTEGT
                     LPKVLGPAWAAEAQRASFLPVQSAERTAAVTHAVAPARTVAAPPHASVPPSPAVNSAL
                     PGVRSVPPLPEEPFERFVATVARVAMNRGATRAAGAVTALLVLGRLARDGLDPQLLDA
                     LTRGRIVAPAGQVTPEFAATTAAWRAVLEGTGGDLSGCGTSTLDTWAAELLAAVMNVP
                     RSEIAELKRELRRCGVAAFGLLAVA"
     gene            1268..1813
                     /locus_tag="VLJ38_22825"
     CDS             1268..1813
                     /locus_tag="VLJ38_22825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42442.1"
                     /translation="MQLRSLALLAGALAAAFGCAPSTPPRWAEGGAPLLIPAAHWDRG
                     DADAIDVKPDGDVLEGGRLIFKLDRVGRAVDEDYEPVALLLPDGRVAGPDNYFLGQVG
                     VTNASPPFAGSAWLSVLPNGQVIFYDQDGARASGGQWAGCNGAALRTCTYVTHLVVLR
                     NYSRRDGNVSVGVGVGVGVGY"
     gene            1856..3163
                     /gene="serS"
                     /locus_tag="VLJ38_22830"
     CDS             1856..3163
                     /gene="serS"
                     /locus_tag="VLJ38_22830"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003218092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HSU42443.1"
                     /translation="MLDGRYVSEHLDEVRALLARRSPEDAASLDNVAELARKRRELVT
                     TTEKLQFERNAASDGMAELAKSGNREAMQARREELKKLSEEVKRHETELAELEGAIEE
                     KLLGIPNVPHATTPAGKTDADNPVVRVVGEQPKFEFTPRAHWEIGESLGILDLDRAAK
                     LSGARFSVLWGQGARLERALAAFMLDLHTREHGYTEVYPPFLVKAEALRGTGNLPKFE
                     GDLFKTFRGDPNDREPLYLIPTAEVPVTNLHADEVIEGDKLPLAYAAYSPCFRSEAGS
                     YGRDVRGLIRQHQFDKVEIVRFCAPEQGLSELELLTGHAENVLKRLGLAYRVVEHVTG
                     DLTFSSTKSYDLEVWLPSQNAYREISSCSWFGDYQARRAKIRYRPEPKGKPRLVNTLN
                     GSGLAIGRTWLAILEQFQQKDGSVLLPEPLHAFMGSERLSPRA"
     gene            3174..3905
                     /locus_tag="VLJ38_22835"
     CDS             3174..3905
                     /locus_tag="VLJ38_22835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42444.1"
                     /translation="MSRSLLLAFALAAATGCLDERRCHDEMTKAQGAVSGIDSHSLAS
                     LHAALPALDTALDACEKAKLGEEHGKLLAAKNQITAQISLLERKAARKAGPTLSAAEL
                     ERIQKDGDPSCPKGQAYKHAGIDKEIKCTGPQLIDMPLDAVKAYFDARHYKLTLTDAP
                     PRVRAEFGAELFVFTFDEPGAGAKCLELYPAPNIPWREAVGRATGVRLDKLKNPGTIA
                     AKRGELALHVEDTESKQLARIGDCG"
     gene            complement(3963..6209)
                     /gene="rnr"
                     /locus_tag="VLJ38_22840"
     CDS             complement(3963..6209)
                     /gene="rnr"
                     /locus_tag="VLJ38_22840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HSU42445.1"
                     /translation="MARARSSAAGRDTFEGVLSLNPRGFGFVAAAGKNDVFVPPDAIG
                     GAMHGDRVLVAVTNISARGSEGRIERVVTRRNPRVAGVLRRKGRSAWLEPDDSRIRGP
                     VVLGAVPKSAPDGAAAVVTITRFPEYSDENPEGELLDVLGAPGDPNVEVRKILVREEI
                     EEQHPDAAVREAEAMAARLRRASAEKRRDLRDVPLPTIDPEDARDHDDAVWVEKNGEG
                     YRAYVAIADVSEYVQPGSALDDEALERGCTIYLPDRAIPMLPAALAADLCSLLPEQER
                     LTLCVIVELDRDANVVDFEIVEGVMRSHAMLTYGGVAKTLGFTEAGPTSTQAEALKKG
                     LRVLDELSRKLRRRRMQRGALDLDLPEARVILDPKTGAPTDVVRRAQDPGVKRAYSMI
                     EELMLLANETVARFLGVKKSPGVYRVHAKPDAQKLERLGNVARKLGVEIDLESLSDPL
                     GVSRWLAKIQKHPRKNVLEMLLLRSLKQAVYDTNNVGHFGLASEAYVHFTSPIRRYPD
                     VEVHRAVKRLLRGGKPDTSAAALEALAQSATRASTRERAAMEVEREVVDLYRTLLMRD
                     RVGETHEGTVTALVGSGVYVSLDSPFVDVLIRFEGLGPDRYESSEDEISVVGVRSGDT
                     ISLGDRLFVTIEDVAVLRRTVYARRVVPEATLKQFEGERREDDRKAPTPRREQRQIRV
                     GERRGPGAAPVGRGARPSGKSRFGQRDQANRGGQREQANRGGQQANRGGQQANRGGQR
                     KGGRKGRR"
     gene            6303..7457
                     /locus_tag="VLJ38_22845"
     CDS             6303..7457
                     /locus_tag="VLJ38_22845"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSU42446.1"
                     /translation="MANVRALLILRAAVLVALLGSSALTIDYLSPVPTYCRATSGCGT
                     VQQSAFAHLGAARIPLPALGLVGFTAVLTLSLLPGARRRAAAPIALVGGLGAAALLLV
                     QWLQIHAFCVFCVTVDVSALVAAAAGAVMLFSRDSELTSSASGLAEPFKDGAWIALGV
                     LAVTAPLLWPSVRPLPDVPREIAAYYVPGKINVVEFVDFQCPFCRLYHPELKKVAAEY
                     GDRVHLVRLDLPLAMHPLARGAARAHVCAVARGRGEELANALMESEDLSVPGLLKTGA
                     AVGLDPKALEACMNAPETDREASKSEELLTRLGLLQGLPTTFVGAKMIVGAVEAPALR
                     EAFEQAALGAHHGVPAPVYVSIVALAAAASLWFGRRGRGTPRPGAPAAGQ"
     gene            complement(7483..>8215)
                     /locus_tag="VLJ38_22850"
     CDS             complement(7483..>8215)
                     /locus_tag="VLJ38_22850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42447.1"
                     /translation="QGGAGRSTFQGGMQMGTGGGGTSVDCGDNPKNGDSCSSPGTCQN
                     TNGCTCQASTLFVVGCTASGTGGQTSNGGRATNEGGRSAAAGSPSEGGRGARDGRGGM
                     AAAGRATNGGAGGGGQSGGGASSGGRPSAGGAPSGGMPGGGSPSGGSPSAGGMTATGG
                     QPGSSVDCNNTPVDGNHCSGGPGVCPVGDCVCGGDGRIGCPAGGETVDCDVTPVDGNH
                     CTGGPGVCPASDCVCGRDGRIACPN"
BASE COUNT         1246 a         2888 c         2791 g         1290 t
ORIGIN      
        1 tgctcaccca cgtgccgtca ccgtggacgg tcgccaagct ccatcccaaa aacacgacgc
       61 aaggctttct ccaaaccgag cgactcgaga gcggcatgtc cggctcggga ctctgggacg
      121 acggcgggcg cctggtcggc atcgccgtcg gaaacgacgc aagttctggc tattttgccg
      181 gctccgagcg cattcggcag ctcttggacc tttcccccgt ccgcgcgccg ctcaagcccg
      241 tcgcgccgaa cgcagcgctg tggggcgatc ccgccctctc ggtggacgac ctcatcgcga
      301 cggcgcgcgc gcgacgcgag cacatcgaaa cgtccctcga tcgattggag cggcacgacc
      361 attgaatcgc tcgcgagacg aagccgggcg gagtggacgc gacgctcgcc cccgagctat
      421 gcgaccgcga gcaagccgaa cgccgcgacc ccgcagcgac gaagctcgcg cttgagctcg
      481 gcgatttcgg aacgcggtac gttcatgacg gcggcgagta gctcggcggc ccacgtgtcg
      541 agcgtcgagg tgccgcagcc ggacagatcg ccccccgtgc cctcgagcac ggcgcgccag
      601 gctgccgtcg tggccgcaaa ttcgggcgtc acctggccag ccggcgcgac gatgcggccg
      661 cgcgtgaggg catcgagcag ctgagggtcg agcccgtcgc gcgcgagccg accgagcacg
      721 agcaatgcag tgaccgcgcc ggcggcgcgg gtggcgccgc ggttcatggc aacccgagcc
      781 actgtcgcga cgaagcgctc gaagggttct tcgggcaacg gcggtacgct gcggacgccc
      841 ggcagcgccg aattgacggc gggcgacggc ggcacgctgg cgtggggtgg agcggcgacc
      901 gtgcgcgccg gcgcaacggc gtgcgtcacc gccgcggtgc gctcggccga ctgcacgggc
      961 aagaacgacg cgcgctgtgc ttcggccgcc cacgcgggtc cgagcacctt cggcaacgtt
     1021 ccctccgtct ttcggagccg tagggtcgga agcggcggcg cgcacggctc ggggcaactc
     1081 cacacgatgc cgtcgtgcaa ttccgggttg tcgttcggaa actcggaggc ggcgcggcgt
     1141 gaaatcacgg agtcccgtcg taacccgagc gatccgaagc agccaaattc cgggtgtgcc
     1201 cagcgccgtc acgcgcccgg ccaggtggcc gcggatcggt cgccccgccc gcgctatcct
     1261 tccgcgcgtg caacttcgaa gcctcgctct gcttgccggc gcactcgctg ccgctttcgg
     1321 ttgcgccccg agcacaccac cacgctgggc cgaaggcggc gcgcccctgc tcatccccgc
     1381 ggcccactgg gaccgcggcg acgccgacgc catcgacgtg aagccggacg gcgacgtgct
     1441 cgagggaggc cggctgattt tcaagctcga tcgggtggga cgcgccgtcg acgaagacta
     1501 cgagccggtc gccttgctcc tgccggacgg tcgcgtcgcg gggccggaca attacttcct
     1561 cgggcaagtg ggagtaacga acgcctcccc gccgttcgca ggcagcgcgt ggctttcggt
     1621 gctgccgaac ggacaagtga tcttttacga tcaagatggg gcacgcgcct cgggtgggca
     1681 gtgggcgggc tgcaacggcg ccgctctccg gacctgcacg tacgtcacgc acttggtcgt
     1741 gctccgaaac tacagccggc gcgatggaaa cgtctcggtc ggtgtaggcg tcggggtcgg
     1801 ggtcgggtac tagtctcgat cggatcctcc aagagggctc aactcgagat ttcgcatgct
     1861 cgacggacgt tacgtttccg aacacctcga cgaagttcgc gcgctcctcg cccgccgctc
     1921 gccggaagat gccgcgtcgc tcgacaacgt ggccgagctc gcgcgcaagc gccgagagct
     1981 cgtcaccacg acggagaagc tacaattcga gcgcaacgcc gcgagcgacg gcatggccga
     2041 gctcgccaag agcggcaatc gcgaggcgat gcaggcacgg cgcgaggagc tgaagaagct
     2101 cagcgaagaa gtgaagcgcc acgagacgga gctcgccgag ctcgagggtg cgatcgaaga
     2161 gaagctcctc ggcattccga acgtgccgca cgcgaccacg ccggccggca agaccgacgc
     2221 cgataatccc gtcgtgcgcg tggtcggcga acagccgaag ttcgagttca cgccgcgcgc
     2281 gcactgggaa atcggggaaa gcctcgggat tttggatttg gatcgcgcgg ccaagctctc
     2341 gggcgcgcgt ttttccgtgc tctggggcca aggcgcgcgg ctcgagcgcg cgctcgccgc
     2401 gttcatgctc gatttgcaca cgcgcgagca cggctacacg gaggtgtacc cgcccttcct
     2461 cgtgaaggcg gaggcactgc gcggcaccgg caatctcccc aaattcgagg gcgatctgtt
     2521 caagaccttc cgcggcgatc cgaacgatcg cgagccgctc tacttgattc ccacggcgga
     2581 ggttccggtc acgaaccttc acgcggacga ggtcatcgag ggtgacaagc tgccgctcgc
     2641 gtacgcggct tacagcccgt gcttccgcag cgaagccggc tcctacggtc gcgacgtgcg
     2701 cggcctgatt cgccagcacc agttcgacaa ggtcgagatc gtgcgctttt gcgcgccgga
     2761 gcagggcctg agcgagctcg agctcttgac gggacacgcg gagaacgtct tgaagcggct
     2821 cggtctcgcg tatcgcgtcg tcgagcacgt gacgggcgac ctcacgtttt cgtcgacgaa
     2881 atcctacgac ctcgaggtgt ggctgccgtc gcaaaacgcg tatcgcgaaa tctcgagctg
     2941 ctcctggttc ggcgactatc aagcgcgacg cgccaagatt cgctaccgac ccgagccgaa
     3001 gggcaagccg cggctcgtca acacgctgaa cggctccggg ctcgcgatcg gacgcacttg
     3061 gctcgcgatt ttggagcaat tccaacaaaa ggacggcagc gtgctcttgc ccgagccgct
     3121 gcacgcgttc atgggcagcg agcggctctc gccgcgcgcc tgagctactc gcgatgtcgc
     3181 gctcgctcct gctcgcgttc gcgctcgccg ccgcgaccgg ctgcctcgac gagcggcgct
     3241 gtcacgacga gatgacgaaa gcacaaggcg ccgtgagcgg catcgattcg cactcgctcg
     3301 ctagcctaca cgccgctttg cccgcgctcg acaccgcgct cgacgcctgc gaaaaggcga
     3361 agctcggcga agaacacggc aagctgctcg ctgcaaaaaa ccaaattacg gctcaaatct
     3421 cgctgctcga gcgcaaggcc gcgcgcaaag cgggcccgac cttgagcgcc gccgagctcg
     3481 agcgcatcca aaaggacggc gatccgagct gtcccaaggg acaagcctac aagcacgctg
     3541 gcatcgacaa ggaaatcaag tgcacgggcc cgcagctcat cgacatgccg ctggacgcgg
     3601 tgaaggccta cttcgacgct cggcactaca agctgacgct cacggacgct ccgccgcgcg
     3661 tgcgcgccga gttcggcgcc gagctcttcg tgttcacgtt cgacgagccg ggagcgggag
     3721 ccaagtgcct cgagctctat ccggcgccga acatcccgtg gcgcgaagcc gtggggcgcg
     3781 cgacgggcgt gcgactcgac aagctcaaga atcccgggac aatcgccgcg aaacggggcg
     3841 aactcgcgct gcacgtcgag gacacggaga gcaagcagct cgcgcgcatt ggcgactgcg
     3901 ggtgacgcgg cgctgcgggg cgttgcaggc gcgcgccgac gtggacacgc gcggccgttc
     3961 gctcagcgcc gacctttgcg gccgcccttg cgttgcccgc cgcggttcgc ctgctgcccg
     4021 ccgcggttcg cctgctgccc gccacgattc gcctgctcgc gctgcccgcc acgattcgct
     4081 tggtcgcgct gcccgaagcg tgacttaccg ctcggtcggg ctccacgccc gaccggtgcg
     4141 gcccctggac cgcgccgctc gccgacgcgg atctgtcgct gctcgcgacg gggggtcggt
     4201 gctttgcggt cgtcctcgcg gcgctcgccc tcgaattgct tgagcgtggc ttcgggcacg
     4261 acgcgtcgcg cgtagacggt gcggcgcagc acggcgacgt cctcgatcgt gacgaatagg
     4321 cggtcgccca gggaaatcgt gtcgcccgag cgcacgccga cgacgctgat ttcgtcttcg
     4381 ctcgactcgt agcgatcggg gccgaggcct tcgaagcgaa tgagcacgtc gacgaacggc
     4441 gagtcgagcg agacgtaaac gccgctgccg acgagcgccg tcacggtgcc ctcgtgcgtt
     4501 tcgccgacgc ggtcccgcat gagcaacgtg cggtacaggt ccacgacttc acgctcgacc
     4561 tccatcgccg ctcgctcgcg cgtgctcgcg cgggtcgccg attgagcgag cgcttcgagc
     4621 gccgcggcgg aagtgtccgg cttgccgccg cgcaagaggc gcttcacggc gcgatgtact
     4681 tcgacgtcgg gataacgccg aatcggcgac gtgaaatgca cgtacgcttc cgaggcgagc
     4741 ccgaagtggc cgacgttgtt cgtgtcgtac acggcctgct tcagcgagcg caaaagcagc
     4801 atttcgagca cgttcttgcg cgggtgcttc tggattttcg cgagccagcg cgagacgccg
     4861 agcggatcgg agagcgactc gaggtcgatc tcgacgccca atttacgagc gacgtttccg
     4921 agccgctcga gcttctgcgc atcgggcttg gcgtgcacac ggtacacgcc cgggctcttt
     4981 ttcacgccga gaaagcgcgc gacggtctcg ttcgcgagca gcatcagctc ttcgatcatc
     5041 gagtaggcgc gcttcacgcc cggatcctgc gcgcgacgca cgacgtcggt cggcgcgccc
     5101 gtcttcggat cgaggatcac gcgtgcctcg ggcaaatcga ggtcgagcgc gccgcgctgc
     5161 atgcggcgcc ggcgcagctt acgcgagagc tcgtcgagca cgcgcaggcc ctttttcagg
     5221 gcttcggctt gagtgctcgt cgggcccgct tcggtgaagc cgagcgtctt ggcgacgccg
     5281 ccgtacgtga gcatcgcgtg cgaacgcatc acgccctcga cgatttcgaa gtccacgacg
     5341 ttcgcgtcgc gatcgagctc gacgatgaca cacagggtga gccgctcctg ttcaggcagg
     5401 agcgagcaca gatccgcggc gagcgcggcc ggcaacatcg ggatcgcgcg atcgggcagg
     5461 tagatggtgc aaccacgctc gagggcttcg tcgtcgagcg cgctgcccgg ctggacgtat
     5521 tcgctcacgt cggcgatcgc gacgtacgcg cggtacccct cgccgttctt ttcgacccac
     5581 acggcgtcat cgtggtcgcg cgcgtcctcg ggatcgatgg tcggcagcgg aacgtcacgc
     5641 aaatcgcggc gtttttccgc gctggcgcgg cgcaggcgcg ccgccatggc ctcggcttcg
     5701 cgcacggcgg cgtcggggtg ctgctcttcg atttcctcgc gcacgaggat cttgcgcacc
     5761 tcgacgttcg gatcgccggg cgcgccgagc acgtcgagca gctcgccttc ggggttctcg
     5821 tccgaatatt cggggaagcg cgtgatggtg acgacggcgg cggcgccatc gggcgccgac
     5881 ttcgggaccg cgccgagcac gacgggaccg cgaatgcgcg agtcgtcggg ctcgagccac
     5941 gcgcttcggc ccttgcgcct gagcacgccc gcgacgcgcg gattgcgccg cgtgaccacg
     6001 cgttcgatgc gaccctcgct gccgcgcgcc gagatgttcg tcaccgcgac caggacgcga
     6061 tcgccgtgca tcgcgccgcc gatggcgtcg ggcggcacga aaacgtcgtt cttgccggcg
     6121 gccgcgacga agccgaaccc cctcgggttc aggctgagaa cgccctcgaa ggtgtctcgc
     6181 cccgcggcac tggatcgagc tcgagccatg gccgcggctt tacaccactt ccttgcccgc
     6241 ggggccgctt cctgatgcgc ttttcgtcca aggctgacaa agtcgtcatt atcggtcgac
     6301 ccgtggcgaa cgttcgcgca ctgctcatcc tccgcgccgc cgtgctcgtg gcgctgctcg
     6361 gcagctctgc cctcacgatc gactatttga gtccggtccc tacctactgc cgcgcgacga
     6421 gcggctgcgg gaccgtgcag cagagcgcct tcgcgcatct cggcgcggcg cgcatcccgc
     6481 tgccggcgct cgggctcgtc gggttcacgg cggtgctcac gctctcgctc ctgcccggcg
     6541 cgcgccggcg cgcggcggct ccgattgcgc tcgtcggggg cctcggcgcg gcagcgctgc
     6601 tgctggttca gtggctccag atccacgcgt tctgcgtctt ctgcgtgacc gttgacgtgt
     6661 cggcgctcgt cgctgccgca gcgggcgcgg tcatgttgtt cagccgcgac tccgagttga
     6721 cgagctcggc gagcggcttg gccgagccgt tcaaggacgg ggcttggatc gcgctcggcg
     6781 tgctcgcggt gacggcgccg ctgctgtggc cgtcggtgcg cccgctaccg gacgtaccgc
     6841 gcgaaatcgc cgcgtactac gtgcccggca agatcaacgt cgtcgagttc gtcgatttcc
     6901 agtgcccgtt ctgccgcctc taccaccccg agctcaagaa agtcgcggcg gaatacggcg
     6961 atcgagtgca cctcgtgcgc ctcgatctac cgctcgccat gcatccgctc gcgcgcggcg
     7021 ccgcgcgggc gcacgtctgt gccgtcgcgc gcggccgcgg tgaagaactc gcgaacgcgc
     7081 tgatggagtc cgaggatctc agcgttcccg gcttgctcaa gaccggcgcc gcggtgggtc
     7141 tcgatccgaa ggcgctcgag gcgtgcatga acgcccccga gaccgatcgc gaagcgtcga
     7201 agagcgagga gctcctcacg cgcctcggcc tgcttcaggg tctgccgacg acgttcgtcg
     7261 gagcgaagat gatcgtcgga gcggtcgaag cgccagcgct gcgcgaagcg ttcgagcagg
     7321 ctgcgctcgg cgcgcaccac ggcgtgccgg cgcctgttta cgtctccatc gtcgcgctcg
     7381 ccgcagcggc gagtctttgg tttggccggc gcggacgcgg cacaccgcgc ccaggcgcgc
     7441 ccgcagcagg ccagtgacgc tgcggacgcg cggtttcgag cgtcaattcg gacaggcgat
     7501 gcgaccgtca cggccgcaga cgcagtcgct cgccgggcac acgcccggac cgccggtgca
     7561 atgattgccg tcgacgggcg tcacgtcgca gtcgactgtt tctccacccg cgggacagcc
     7621 gatgcggcca tcgccgccgc agacgcaatc gccgaccggg catacgccgg gaccaccgga
     7681 gcagtggttg ccgtccacgg gcgtgttgtt gcagtcgacg ctcgagcccg gctgcccgcc
     7741 cgtggccgtc atgccgccgg cgctcgggct acctccgctc gggctaccac cgcccggcat
     7801 gccaccgctc ggcgcaccgc ccgcgctcgg gcggccaccg ctcgacgcgc cgccgcccga
     7861 ttggccgcca ccgccagcgc cgccgttcgt ggctcggccc gcagccgcca taccgccgcg
     7921 gccgtcacgc gcgccgcgac cgccctcgct cgggctgccc gccgctgcgc tccggccgcc
     7981 ctcgttcgtc gcccggccac cattgctcgt ctggccaccg gtgccgctcg ccgtacagcc
     8041 gaccacgaac agcgtcgagg cttggcaggt acagccgttc gtgttctggc aggtgccggg
     8101 ggacgagcag gagtcgccgt ttttcgggtt gtcgccgcag tcaacgctgg tgccgccgcc
     8161 gccggtgccc atctgcatgc cgccctggaa cgtggaacgc cccgcgccgc cctgg
//
LOCUS       DATIML010001328         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2591638, whole genome shotgun sequence.
ACCESSION   DATIML010001328 DATIML010000000
VERSION     DATIML010001328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2591638"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="VLJ38_22855"
     CDS             complement(<1..242)
                     /locus_tag="VLJ38_22855"
                     /inference="COORDINATES: protein motif:HMM:NF017380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF763 domain-containing protein"
                     /protein_id="HSU42448.1"
                     /translation="MTRRSGTADLPLHGGRVPAWLGQRMTRLGRVIVEAIAHEYGRDE
                     VLRRLSHPFWFQAFGAVMGMDWHSSGITTSVLGALKR"
     gene            322..528
                     /locus_tag="VLJ38_22860"
     CDS             322..528
                     /locus_tag="VLJ38_22860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42449.1"
                     /translation="MALSLMPILIHSEAVSAEVRAVLRAADASPPEKRRAELEAAARL
                     LYGEFRLDCRDVRELVGLGPKHEC"
     gene            complement(538..1149)
                     /locus_tag="VLJ38_22865"
     CDS             complement(538..1149)
                     /locus_tag="VLJ38_22865"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HSU42450.1"
                     /translation="MAVGRGSQSWFLAVVTLALGLVLGKFAPEWFKWGKAAEPLPDVI
                     TQVRELSRLEGVSYHVERVVDLKDKQQALFGLVSAEDAILLVASGDVTAGVDFGKLGP
                     GDVAVSADRRSVTLHLPPVEIFSARLDNDRTYVHTRKTDALAERKESLETEARRAAEQ
                     TLRAAAEEGGIQKRAEQSVERTVRSLMRSLGFNDVHIDFRARA"
     gene            1392..>2125
                     /locus_tag="VLJ38_22870"
     CDS             1392..>2125
                     /locus_tag="VLJ38_22870"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSU42451.1"
                     /translation="MSSVPRAGTLPFAEVLGVLPVGVLVWSTDARLAYANAHAADVAG
                     RPLAAGLSLRELVATLGLRQRSSGGAYPSERLLVPDVFAGEILAFDDCELELPGGARR
                     EIEGRTTPVVDAHGAVSSAVTTFRDVTVARRAEALAAGEARILELVASSHPLHQTLDE
                     LARLFESQSEGMLASVLLVENGVVHHAAGPSLPETWARSIDGQPIGIDRGSCGTAAYL
                     KMPVIVTDIASDPRWASYREWALGLGL"
BASE COUNT          320 a          722 c          717 g          366 t
ORIGIN      
        1 cgcttcaggg cgccgagcac cgacgtcgtg atgcccgacg aatgccaatc catgcccatg
       61 actgcgccga aggcttggaa ccaaaaggga tgcgagagtc gtcgcaggac ttcgtcgcgg
      121 ccgtactcgt gggcgatcgc ctcgacgatc acgcgcccga gccgagtcat gcgctggccg
      181 agccacgctg ggacacgacc gccgtgcagg ggcagatctg ccgtgccgct ccgacgcgtc
      241 atgccccgac cttagcgttt ttgtcgggcc gcgccgcgct tgacgacggg aatagcgggc
      301 ccgatggata ggttagcggt catggctctc tcgttgatgc ccattttgat tcatagcgaa
      361 gcggtatcgg cggaggtgcg cgccgtgctt cgagccgccg acgcgtcgcc gcccgaaaag
      421 cggcgcgccg agctcgaagc cgccgcccgc ctcctgtacg gcgagttccg gctcgattgt
      481 cgcgacgtgc gcgagctcgt cggtctcggg ccgaaacacg agtgctgagc gtcgggctca
      541 cgcccgagcg cggaagtcga tgtgcacgtc gttgaaaccc agcgagcgca tgagacttct
      601 cacggtgcgc tcgaccgact gttcggcgcg cttttggatg ccgccctctt cggcggcggc
      661 tcgcagggtc tgttcggcgg cgcgtcgcgc ttcggtctcg agtgactcct tgcgttcggc
      721 gagcgcgtcg gtcttgcgcg tgtgcacgta agtgcgatcg ttgtcgagcc gcgccgaaaa
      781 gatctcgacg gggggcaagt gcagcgtgac ggagcgtcga tcggcgctca cggccacgtc
      841 gcccgggccg agcttgccga agtcgacgcc cgcggtgacg tcgccgctcg ccacgagcag
      901 gatcgcgtcc tccgccgaga cgaggccgaa cagcgcctgc tgcttgtcct tcaggtcgac
      961 cacgcgttcg acgtggtaac tcactccttc gaggcgcgag agctcgcgaa cctgcgtgat
     1021 gacgtcgggg aggggctctg cagccttccc ccacttgaac cattccggcg cgaacttgcc
     1081 gagcacgagg ccgagcgcga gcgtcaccac cgccaggaac caagactgcg agccacgccc
     1141 gactgccatc tccactacac gatagcactc gcgcaaagac tgcgcgggcg tcgctctccg
     1201 cagccatcgc gactgccaaa tcaaggatgc ggcgattttc gaggcagggg ggattggacg
     1261 aaagagcagt attttagtag tttcatcgag tgcgggcccg gtcgtcccgt actcacgcga
     1321 aggggttccg gtttgttgag agcggctatt tctgagctcg cgacggcgtg tgccggcagc
     1381 ggtcgtgggc catgagctcc gtcccccgcg cgggcacgct gccgttcgcc gaagttctcg
     1441 gcgttctccc cgtcggcgtg ctcgtgtgga gcacggacgc tcgactcgct tacgccaacg
     1501 ctcacgccgc cgacgttgcc ggacggccgc tcgctgccgg cctctcgctc cgcgagctcg
     1561 tcgcgaccct cggcctgcgt cagagatcga gcggcggcgc gtatccctcc gagcgcctgc
     1621 tcgttccgga cgtgttcgct ggggaaatcc tggcgttcga cgactgtgag ctcgagctac
     1681 cgggcggagc acgccgtgaa atcgagggac gcacgacccc cgtcgtggac gcgcacggcg
     1741 ctgtttcgtc ggcggtgacg acctttcgcg acgtgaccgt agcgcgccgg gccgaggcgc
     1801 tcgccgccgg ggaggcgcgc atcctcgagc tcgtcgcctc ctctcacccc ctccaccaga
     1861 cgctcgatga gctcgcgcgt ctgttcgaga gtcagtcgga gggaatgcta gcgtcggtgc
     1921 tgctcgtcga aaacggcgtc gttcaccacg ccgccggtcc gagtctgccc gaaacctggg
     1981 cgcgctccat cgacggccag ccgattggca tcgatcgcgg gtcgtgcggc accgccgcgt
     2041 acctcaagat gcccgtgatc gtcaccgaca tcgcgagcga cccgcgctgg gcgagctacc
     2101 gcgagtgggc gctcgggctc ggact
//
LOCUS       DATIML010001329         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4611886, whole genome shotgun sequence.
ACCESSION   DATIML010001329 DATIML010000000
VERSION     DATIML010001329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4611886"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VLJ38_22875"
     CDS             <1..885
                     /locus_tag="VLJ38_22875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42452.1"
                     /translation="QLRGEHGTAPHAAPLDVRASVTLLPDAQFRARLELVQGGSERSR
                     VLEAPTCSDLAEASAVVIALAIAPAAQSSDAPLPMPPLDMPAASPITPLPAITPLPAV
                     TVAATADKGVTRPPESSHAAAHWSVDVSAGAALDFGATASAALGATLLGRLHVGHLLS
                     FALRGSFFPPHASTVPLQPTQGVDILLAAAAPLACVSPVDLPFEFDACAEFEAGYLHA
                     RGFGPPLHYEKSAPWFAPGAGLSAGFPKRGRVRSRLSADALFPLNHTEFVLTNVGVAH
                     QLPVVAPRVGLYLELAFP"
     gene            917..1486
                     /locus_tag="VLJ38_22880"
     CDS             917..1486
                     /locus_tag="VLJ38_22880"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU42453.1"
                     /translation="MAGSPDVLTRMAETRSASVHDWSAFYDEHFDFVWRSLRRLGVPE
                     AALDDAAQEVFLVAFRREAEFEGRSSLRTWLFGIAWNRARELLRGARRRPEEPLPDML
                     PAAPRADQEQIAIEREALRFAYRVLDELAPERRAVLLMVDVEEMTAVEIAKILEIPVN
                     TVYSRIRLARRDFEASLQRCRAREQRRQR"
     gene            1483..>2143
                     /locus_tag="VLJ38_22885"
     CDS             1483..>2143
                     /locus_tag="VLJ38_22885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42454.1"
                     /translation="MSELKREARAVLDGLKGDGPSAERRARVKSRLLLALGGGAAALG
                     GSAAVAEAASPLVAAAATGTAVSAAKGLAVGSLLVWFGAGAAAGVGVSGVVVAARFVT
                     APTASAPARARLSSSESIVPQPDLPAHPGAAVALPAKPAVGSAELGNEGVSGAVRGVT
                     AAPSGLVPSALSAPSVTSAPSVTGAASVTSAPSVTSAASVTSAASVTSAASVTSAPSV
                     AN"
BASE COUNT          281 a          765 c          744 g          353 t
ORIGIN      
        1 cagctgcgcg gtgaacacgg cacggctccg cacgctgcgc cgctcgacgt gcgcgcgtcc
       61 gtgacgctgc tccccgacgc ccagtttcgt gctcgactcg agctcgtcca gggtggcagc
      121 gaacgctcgc gcgtgctcga agcgccgacg tgctcggacc tggcggaggc gagcgccgtc
      181 gtgatcgcgc tggcgattgc tcctgccgcg caaagcagcg acgcgccctt gccgatgcct
      241 ccgctcgaca tgcccgccgc ctcgcccatc actccactgc cggccatcac tccactaccg
      301 gcagttaccg tggccgcgac ggcagacaag ggcgtgacgc gccctccgga gtcgtcgcac
      361 gccgccgcgc attggagcgt cgacgtgagc gcgggcgccg cgctggactt cggcgcgacc
      421 gcgagcgccg ccttgggggc gacgttgctc ggacgtttac acgtcgggca cctcctctca
      481 ttcgcgctgc gcggcagttt ctttcccccg catgcttcca cggtgccgct ccagccgacc
      541 caaggggtcg atatcctgct cgcggccgcg gctccgctcg cgtgcgtgag ccccgtcgac
      601 ctgccgttcg agttcgacgc gtgtgccgag ttcgaggcgg gctacctgca cgctcgtggg
      661 ttcggtccgc cactgcacta tgaaaaaagt gcgccgtggt tcgcgccggg cgcggggctc
      721 agcgccggct tccccaagcg cggccgcgtg cgctctcgcc tgagcgccga cgccctattc
      781 cctctcaatc atactgagtt cgtgctgacg aacgtgggcg tggcgcacca attgccggtc
      841 gtcgctccac gggtcggcct ctatctggag ctcgcttttc cgtgacggaa aaccgcgcgc
      901 ccggtcacta gctcgcatgg ccggctcacc ggacgtcctc acccgaatgg cggagacgcg
      961 gagcgccagt gtgcacgatt ggtcggcttt ttatgacgag cacttcgatt tcgtatggcg
     1021 gagcctgcgt cggctcggcg tcccggaagc ggcgctcgat gatgccgcgc aggaggtctt
     1081 tctcgtcgcg tttcggcgag aggcggaatt cgaggggcgc tcgtcgctgc gcacctggct
     1141 cttcggcatc gcttggaacc gtgcgcgcga gctcttgcgc ggcgcccgcc gccgccccga
     1201 agagccgctg cccgacatgt tgcccgctgc gccccgggcg gatcaggagc aaatcgccat
     1261 cgaacgtgag gcgctccgtt tcgcttaccg cgtactcgac gagctcgctc ccgagcgccg
     1321 cgccgtcctc ctcatggtcg acgtcgagga gatgaccgcc gtggaaatcg ccaaaatcct
     1381 cgagatcccg gtcaacaccg tgtactcgcg cattcgcttg gcgcggcgcg atttcgaagc
     1441 atcgcttcag cgctgccgag cgcgcgagca acggaggcaa cgatgagcga gctcaagcga
     1501 gaggcgcgcg ccgtgctcga cggactcaaa ggcgacggtc cgagcgccga acgacgggca
     1561 cgcgtcaaat cgagactgct gctcgcactc ggcggcggcg cggcggcgct cggcggttcg
     1621 gcggccgtgg cggaagcagc gagtccgctc gtggcggctg cggcgacggg caccgccgtg
     1681 agcgccgcga aggggctcgc cgtgggctcc ttgttggttt ggtttggggc aggggccgcg
     1741 gcgggcgtcg gggtgagcgg cgtcgtggtg gcggcgcggt tcgtgacggc tccgaccgcc
     1801 agcgcgccgg cgcgtgcacg gctgtcgtcc tcggaatcca tcgtgccgca accggatcta
     1861 ccggcgcatc ccggtgccgc cgtggcattg cctgcaaagc ccgctgtcgg ctcggcagag
     1921 ctcgggaacg aaggtgtttc cggcgctgtt cggggcgtca cggcggcgcc gagtggcctc
     1981 gttccgtccg cgctgagcgc gccgtccgtc acgagcgcgc cgtccgtcac gggcgcagcg
     2041 tccgtcacga gcgcgccgtc cgtcacgagc gcagcgtccg tcacgagcgc agcgtccgtc
     2101 acgagcgcag cgtccgtcac gagcgcgccg tccgtcgcga acc
//
LOCUS       DATIML010001330         2667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3746838, whole genome shotgun sequence.
ACCESSION   DATIML010001330 DATIML010000000
VERSION     DATIML010001330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3746838"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VLJ38_22890"
     CDS             <1..230
                     /locus_tag="VLJ38_22890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42455.1"
                     /translation="NGTGVLSSRGEHHNLVQQVLVNFQMLKDGGLGYLRLLELLPDGK
                     TLRMKTFSPTLGVFATPSDQTGTLALDPPLW"
     gene            complement(234..1532)
                     /gene="bioA"
                     /locus_tag="VLJ38_22895"
     CDS             complement(234..1532)
                     /gene="bioA"
                     /locus_tag="VLJ38_22895"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: protein motif:HMM:TIGR00508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HSU42456.1"
                     /translation="MNRERIVELDKLHVWHPYTAMSRYVAEIDPLVIVRAEGSRLFDA
                     DGRSYLDANSSWYCAALGHRHPRLVAALCEQAESLCHVALAGVTHEPVVRLAAELSAR
                     APGTLPHVFFSDDGSTAVEAALKLAAQYWAQNGRPARRRFVALEGAFHGETLGATMLG
                     GIELFRRAFAGLVGDCLRVPTDAGGYERTFAVLSELVAAHADEIAAVVLEPVVQGAGG
                     MRIYDPGLVRAAREITARHDLFLVLDEVFTGYGRTGPMWAAEHAGVEPDLVCVAKGFT
                     SGLLPMAATLASRRIFEGFLGDPARAFMHGHTFTGNPLGARVALEVLAVFRDERVIEL
                     ARPKAARIAACFARLGALPGVVASRSLGMVAALDLNTRGYLDQAGWRVYEEARRRGAY
                     LRPLGSTVYVTPPINIPDAELDELLGIVEESVTLVCRRDA"
     gene            complement(1529..>2667)
                     /locus_tag="VLJ38_22900"
     CDS             complement(1529..>2667)
                     /locus_tag="VLJ38_22900"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU42457.1"
                     /translation="VARRTFTTTVLGASMHYSIGVPSALCELLYAVGLFEVLVTSSLL
                     LRAYVFGRKEALSALIGAGILVPAAANDVGLASGWLTRTMPVLPHAFLLYAFSVASAL
                     LLRYRIAKGELESAASSLRERTEELKHSHAELRQIQDELSSKRQLAVVGELAAAIAHE
                     VRNPLAVIVNAVAGLRRGSLRPEDRTTLLDIVEEEAGRLNRLVGDLLRFARPFAISRQ
                     QVSLVEMANRFNDTDDEGQAVHVHVDGAPDAEIVWVDPNLFRLVFDNLISNARQAMRD
                     GGTVEVRLRRDDRPGVPCVRVEVEDRGQGMSPDVRRRALDPFYTTRPSGTGLGLPIVQ
                     RIIEAHGGWLAIESTEAVGTTVTLHFPVAGPASLAQGARASIAS"
BASE COUNT          447 a          903 c          939 g          378 t
ORIGIN      
        1 gcaacggtac cggcgtgctc tcgagccgcg gcgagcatca caatctcgtg caacaggtgc
       61 tcgtcaattt tcagatgctc aaagacggcg ggctcgggta tctgcggctg ctcgagctgc
      121 tcccggacgg gaagacgcta cgcatgaaga cgttttcgcc gacgctcggc gtgtttgcga
      181 cgccgagcga ccagacgggc acgctcgcgc tcgatccgcc gctctggtag cgctcacgcg
      241 tcgcgccggc agacgagcgt taccgactcc tcgacgatgc cgaggagctc gtcgagctcg
      301 gcgtccggaa tattgatggg cggcgtcacg tacaccgtcg agccgagtgg acgcaggtac
      361 gcgccgcgac ggcgcgcctc ttcgtacacg cgccagcccg cttggtcgag gtagccgcgc
      421 gtattgagat cgagcgcggc gaccatgccg agactgcgcg aagccacgac gccggggagc
      481 gctccgagcc gggcgaagca cgcggcgatg cgtgcagcct tgggccgcgc gagctcgatc
      541 acgcgctcgt cgcggaagac cgcgagcacc tcgagcgcga cgcgagcgcc gagcggattg
      601 cccgtgaagg tatgcccgtg catgaaggcg cgcgcggggt cgcccaaaaa tccctcgaaa
      661 atgcggcggg aggcgagcgt cgccgccatg ggcaagagcc cggacgtaaa gcccttggcg
      721 acgcacacga gatcgggctc gacgcccgcg tgttcggccg cccacatcgg gcccgtgcgg
      781 ccgtagccgg tgaacacttc gtcgaggacg aggaagaggt cgtggcgcgc ggtgatttcg
      841 cgcgccgcgc gcacgagacc gggatcgtag atgcgcatgc cgccggcacc ttgaacgacc
      901 ggctcgagca cgacggccgc aatctcgtcg gcgtgcgccg cgacgagctc cgagagcacg
      961 gcgaaggtgc gctcgtagcc gcccgcgtcc gtcggcacgc gcaggcaatc accgaccagc
     1021 cccgcgaacg cgcgccggaa gagctcgatg cccccgagca tggtcgcgcc gagcgtttcg
     1081 ccgtgaaacg cgccctcgag cgcgacgaaa cgacggcgcg ccgggcggcc attttgcgcc
     1141 caatactggg ccgcgagctt gagcgccgct tcgacggcgg tcgagccgtc gtcgctgaag
     1201 aagacgtgcg gcagcgttcc gggcgcgcgc gcgctgagct cggcggcgag gcgtacgaca
     1261 ggctcatgcg tgacgcccgc gagcgcgacg tggcagaggc tctcggcttg ttcgcagagg
     1321 gccgccacga gtcgcgggtg ccggtggccg agcgccgcgc agtaccaaga cgaattggcg
     1381 tcgaggtacg agcgcccgtc cgcgtcgaac aaacgcgagc cctcagcgcg tacgatgacg
     1441 agcggatcga tttccgcgac gtagcggctc atggccgtgt acgggtgcca aacgtggagc
     1501 ttgtcgagct cgacgatgcg ctcgcgattc atgaggcgat gctcgcccga gcaccctggg
     1561 ccagcgaggc cggtcccgca accggaaagt gcagcgtcac cgtggtgccc acggcttcgg
     1621 tgctctcgat cgcgagccaa ccgccgtgcg cctcgatgat gcgctgaacg atgggcaaac
     1681 cgaggcccgt gccgctcggg cgcgtcgtat aaaacgggtc gagcgcgcgc cgccgcacgt
     1741 cgggtgacat gccctgaccc ctatcctcga cctcgacgcg cacgcaggga acacccggcc
     1801 gatcgtcgcg gcgaaggcgc acctcgacgg tgccgccgtc gcgcattgcc tggcgcgcgt
     1861 tcgagatcag gttgtcgaac accaagcgga agaggttcgg atccacccac acgatctccg
     1921 cgtcgggcgc gccgtcgacg tgcacgtgga cggcctggcc ttcgtcgtcc gtgtcgttga
     1981 agcggttggc catctcgacg agcgaaacct gctgcctgct tatcgcgaac ggacgcgcga
     2041 agcgcaagag gtcacccacg aggcggttca gccgccccgc ctcctcttcg acgatgtcga
     2101 gcagcgtcgt cctgtcctcg ggccggaggc tcccccggcg aagtcccgcc acggcgttga
     2161 cgatgacggc gagcggattt ctcacctcgt gcgcgatcgc ggcggcaagc tcacccacga
     2221 cggcgagctg gcgcttgctc gagagctcgt cctggatctg gcgcagctcg gcgtgggagt
     2281 gtttgagctc ctcggtgcgc tcgcgcaagc tgctcgccgc gctctcgagc tcgcctttgg
     2341 cgatgcgata gcggaggagg agcgcggagg cgacgctgaa cgcgtagagc aagaacgcgt
     2401 gcggcaagac gggcatcgtg cgcgtcagcc agccgctcgc gagcccgacg tcgttggcgg
     2461 ccgcgggcac caagatgccg gcgccgatga gcgcgctcaa cgcttccttg cggccgaaca
     2521 cgtaggcgcg gagcaagagg ctgctcgtga ccagcacttc gaacaagccg accgcgtaga
     2581 gaagctcgca aagcgcgctc ggcacgccga tgctgtaatg catgctcgcg ccgagcaccg
     2641 tggtcgtgaa cgtacggcgc gcgaccc
//
LOCUS       DATIML010001331         2811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2592497, whole genome shotgun sequence.
ACCESSION   DATIML010001331 DATIML010000000
VERSION     DATIML010001331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2592497"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            529..921
                     /locus_tag="VLJ38_22905"
     CDS             529..921
                     /locus_tag="VLJ38_22905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42458.1"
                     /translation="MPASTCAADERTLMYFSASCEGGQCVYSTQTYACMGLCAGGACL
                     ASTTTTSGSPPPSTCTPSSEGTAGQAGDTAYTPGDCPIPASTCADASTLDYYVVQCVN
                     GQCVTSVQAMRCAVYCVNGACQGNFTAR"
     gene            925..1731
                     /locus_tag="VLJ38_22910"
     CDS             925..1731
                     /locus_tag="VLJ38_22910"
                     /inference="COORDINATES: protein motif:HMM:NF016946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008488 - gamma-glutamyl carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0017187 - peptidyl-glutamic acid
                     carboxylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HTTM domain-containing protein"
                     /protein_id="HSU42459.1"
                     /translation="MPDARSLAYARVALGTLFLLRTTPILKPLGLEFTAETAPLLGWP
                     RPEWEGAALGLAWPAWLLEAACIVRTFAALGFTLGIRTRACGIVAAAAGYLVLFRNPF
                     GMIATLHLLYQGTFVLALTDAGSTLALRPTPARHVASSLLLVRWFLASIYFWAALVKL
                     RPDWLDGRTLELFQADGAIRGPLAGFVLQSATSRSLVAWTIALTELSLPLLLLAPRTR
                     RWSPFVAMGLHSVIELSARPDLLGWEMGALLLSLWPAPPEPSAERVGPSR"
     gene            1728..2630
                     /locus_tag="VLJ38_22915"
     CDS             1728..2630
                     /locus_tag="VLJ38_22915"
                     /inference="COORDINATES: protein motif:HMM:NF015657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42460.1"
                     /translation="MSASSRHLPLTVLALALSACFAEPRPEPLEHSVDPTCAAPLDLS
                     FAPDTAGADEAYVCFGFDASAFAASTVGGVRWDIGTGGGFLVHHAILYAVAGEFPDGP
                     SVCDAMPDAARELHVWSPGGDDLELPSDTGLELPSATERFAIQAHTLRVGSDPPAGSR
                     VRICGGPAAPSKRAALMGMGAPVPAIRPMHEEQSSTSCVLGSALHLYSGWPHMHLTGK
                     EITLRLTRSGGEAAPLIDVVPWDFHRQRTYLLGVDAAPGDAIELSCTWDNPTNEYVLP
                     GPRTTDEMCNAAFIAWPAESAHCE"
BASE COUNT          394 a          956 c          958 g          503 t
ORIGIN      
        1 gaccggcgcg gagcattttc ggcatgcgcc ggtcggggac gccctgcgtc agaaccaagc
       61 gagtctggcg ttgctcggct gccggacggt gcggaacgcg cggacttcgt ggctctcgct
      121 cgaaacccgt gctaatttgg actctcgcgt ggtggagagt cgagtcgagg tagcctgcgg
      181 cccctcgttg aatggaagaa cagcggagtg aaaagaagca actcagccag ggccgcacgc
      241 tatctcccgc tgcccactcc actcgccggg ttcggagcgc tcttggcgct tgccctgtcg
      301 ctgcgctgcg ccggcaagtc gaatgaagac ggtgccgcgg gcgggcacgc cgggacgggc
      361 tctgcctctg ctggcgccgg tgccggcggt atgggcggtg tgcacactgc tggagcgggc
      421 gccacgagcg tttcgggcag cggcgccgtg agcgggtcgg gggcccgggg cgggaccgct
      481 ggcggttcgg gttcctgtac gacgagcacc cttgcgaacg actgtccgtt gccagcttcc
      541 acctgcgcgg cggacgagcg tacgctcatg tacttcagcg caagctgcga aggcggacaa
      601 tgcgtgtaca gcacgcaaac gtacgcgtgc atgggcctct gcgccggtgg cgcgtgcctc
      661 gcatcgacga ccacgacgag cggctcgcca ccgccgtcca cctgcacgcc ctcgagtgag
      721 ggcactgccg ggcaggcggg cgacacggcg tacacaccag gcgactgtcc gatcccagcg
      781 tcgacctgcg ctgatgcgag cactctcgac tattatgtcg tgcagtgcgt gaacgggcag
      841 tgcgtcacct cggtgcaagc catgcgttgc gcggtgtact gcgtgaacgg cgcctgtcag
      901 ggcaacttca cggccagata gcgagtgccc gacgctcggt cgctcgccta tgctcgtgtc
      961 gcgctcggca cgctatttct gctgcgcacg acgccgattc tgaagccgct cgggctcgag
     1021 ttcacggccg aaacagcgcc gctgctcggc tggccgcgac cggagtggga aggcgccgcg
     1081 ctcgggctcg cgtggccggc ttggctactc gaggccgcgt gcatcgtgcg cacgttcgcg
     1141 gcgctcggct tcacgctcgg tattcgcacg cgagcgtgcg gcatcgtcgc tgccgccgcc
     1201 ggctacctcg ttctattccg aaatccgttc gggatgatcg ctaccctgca cctcctgtat
     1261 caaggaacat tcgtgctcgc gctgaccgac gcgggctcta cgctcgcgct gcgcccgaca
     1321 ccggcgcgcc acgtcgcatc gagcttgctt ctggtccgct ggtttctggc atcgatctat
     1381 ttttgggccg ccctcgtgaa gcttcggccc gactggctcg acggaagaac gctcgagctc
     1441 ttccaggctg acggcgccat tcgcggcccg ctcgccggct tcgtcttgca gagcgccacg
     1501 agccgctcgc tcgtcgcttg gaccatcgcg ctcacggagc tgagcttgcc gctgctgctg
     1561 ctcgcgccgc ggacgcggcg ttggtctccg ttcgtggcga tggggctcca ctccgtcatc
     1621 gagctctcgg ctcgacccga tctgctcggc tgggagatgg gagcgctgct gctgagcttg
     1681 tggccggcgc cgcccgagcc gagcgcagag cgagtggggc cgagtcgatg agtgcttcgt
     1741 cgcgtcacct gcccctgacg gtcctcgcgt tagcactctc cgcatgcttc gcggagccgc
     1801 gcccggagcc gctcgaacac tccgtcgatc cgacctgcgc ggcgccgctc gacttgagct
     1861 tcgctcccga cacggctggt gcggacgagg cgtatgtttg cttcggcttc gacgcgtccg
     1921 cgtttgcagc gagcaccgtc ggcggcgttc gttgggacat cggcacgggc ggcggcttcc
     1981 tcgtgcacca cgcgatccta tacgccgtgg ccggcgagtt tcccgacggt ccgtcggtgt
     2041 gtgacgcgat gcctgatgcg gctcgggagc ttcacgtctg gagcccgggc ggcgacgatc
     2101 tcgagcttcc cagcgacact ggcctcgagc tgccgagcgc taccgagcgc ttcgcaatcc
     2161 aagcccatac gctgcgcgtc ggcagcgatc cgcccgcggg tagccgcgtt cgcatttgtg
     2221 gtggaccggc ggctccctcg aagcgggccg cgttgatggg catgggcgcg cctgtccccg
     2281 ctatccgtcc gatgcacgaa gagcagtcct cgacgagctg cgtactcggc tccgctctac
     2341 atctctactc gggctggccg cacatgcacc tcacgggcaa ggagatcacg ctgcgcctga
     2401 cccgtagcgg cggcgaagcg gcgccgctga tcgatgtggt gccctgggat tttcatcgac
     2461 agaggacgta cctgctcggg gtggacgccg cccccggcga cgcaatcgag ctcagttgta
     2521 cctgggacaa ccccacgaac gagtacgtgc tgcccggccc acgaacgacg gacgagatgt
     2581 gcaacgccgc cttcatcgcc tggccggcag aatctgcgca ctgcgagtaa cgcgtccgag
     2641 ggcgatgacg atccggccgg agtgcaacca acagcggcgt cggtaagagc gagtctcttt
     2701 ggatgaggtc ggcagcgcgg ccgaatgggg ctcgttcgcg acgttccgtg ccgccgtcgg
     2761 cagcgccctc gtcgatgttc gctcgcgcgg gccgagcact ctcggcgtct c
//
LOCUS       DATIML010001332         2872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4903941, whole genome shotgun sequence.
ACCESSION   DATIML010001332 DATIML010000000
VERSION     DATIML010001332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2872
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4903941"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..481)
                     /locus_tag="VLJ38_22920"
     CDS             complement(8..481)
                     /locus_tag="VLJ38_22920"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSU42461.1"
                     /translation="MSQPVLVVGPESTVRELFELSRRRLVHHFPILERGALFGIVCTC
                     DLRDAAPDAKVRAFARRDVATIDGARSAADAARVMTERGVGSAVVVGPEGVYGIVTRG
                     DLLRLGSSATLLEESHCACCDSHEHLRAGPDGAFLCADCKQRASGEDWFDTGVGD"
     gene            888..>2872
                     /locus_tag="VLJ38_22925"
     CDS             888..>2872
                     /locus_tag="VLJ38_22925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42462.1"
                     /translation="MPNEHAVVSPSHSTPSRSSELELIHYIHLKLAALGEAISGTNDD
                     APFLEIAGPLLQNHFQKDELLGWPLCPADARIQHFLDGYLADVEVSGCKLPTKTLVLD
                     RPGIARVLSLPPARDHFASPYVTSYRVVQGVLHNPKSDRRTTQGVFHVAEGGLPVPAD
                     KQAVPKLTFARLLAAALRPPADALLLPFSADAPVGTRLFASLLLRPLVCPRSDRDVEK
                     RMEVRFFAPGSLVSNLDFVERIFGNGGDPFLPDNDAGLDVAGWTGHTGCVILAPHLTG
                     LTKLELGLPHADQATPRQVRDGMCYREPGELYNGGNAFKITCRDERGVIVTIIADNYY
                     GYCKKEIKTQISYAANLYGSCEEEHAGGVLAYPSYVLGAHFGKAHSFELKPTTFERAM
                     QLLGDRVELKPGRHAIDRNFPDLHYVPEDAEFDLAAGRIHWVAGGERKELTLRAREIY
                     VLPSGYKVRIEKQVGGTAWRLVGSRADGVLCHKPCTVSGGGKSEISKSLQPMIKAAPA
                     YVRDYERDFEYVSELLAKDFSHIYRPGKGDGRSSRPPLSPERSLGSIIKLLTPSDDYT
                     EEHNAWVRALPQTIRSLVFIVKRYHLPASGNPKSRFTVDTVNGFPGHELKLDNQLLLT
                     GHLRVGFEPGTSLWRMFKLRPDFHAADKVQVEDDITAS"
BASE COUNT          510 a          995 c          888 g          479 t
ORIGIN      
        1 aaagcgctca gtcaccgacg ccggtgtcga accaatcttc tccactcgcg cgctgcttgc
       61 agtccgcaca caggaacgcg ccgtcggggc ccgcccgcag gtgctcgtgg ctgtcgcagc
      121 aggcgcaatg actttcctcg agcagggtcg cgctcgaacc caggcgcagc aggtccccgc
      181 gcgtcacgat gccgtagacg ccctccggtc cgaccacgac ggccgagccc acgcctcgtt
      241 ccgtcatgac gcgcgcggcg tcggcggcgc tccgtgcgcc atcgatggtc gcgacgtcgc
      301 gacgagcgaa agcacgcacc tttgcgtccg gcgcggcatc gcgcaagtcg cacgtgcaga
      361 cgatgccgaa gagcgcaccc cgctcgagga tcggaaagtg atgcacgagc ctgcgtcgcg
      421 aaagctcgaa cagctcgcgc accgtcgact cgggaccgac gacgagcact ggttggctca
      481 tgatctcaga aacgagctct gtgcttgttt gcatgctgcg cacctcgaac agcggcgtgt
      541 gcaagcgaca cgccacttgg cgcgcgacga gtttcgcgcc gcaaattcag cgtcgccggg
      601 cgcacgaaac gcgcgcgcaa cgcgagcatg cgcgcgacac gcagtggctt tcgcgcaagg
      661 actgcacgag tcctgtttgc gcgcgcaaag cgtgcgagac gtggtccgtg gcgtgtgcgg
      721 gcgctcgcaa tcggagtgaa acccgcgtgc ggcgaagtcg actcaatcgc acgcgctcag
      781 gcgacgtcga gacctcgcgc gacccgcgcg tcagctcgcg aaaccctgct gacttgctgg
      841 gcacacgctt cgcgacaggc acggtagctg cttatcggac tcgcatcatg cccaacgaac
      901 acgctgtcgt ctcgccgtcg cactcgacgc cgtcacgctc gtcggagctc gagctcatcc
      961 actacatcca cctgaagctc gccgcgctcg gcgaggcgat cagtgggacg aacgacgacg
     1021 cgccgttcct cgagatcgca ggcccgctgc tccagaacca tttccaaaag gacgaactcc
     1081 tcggctggcc cttgtgcccg gccgacgcac gcatccagca ctttttggac ggctacttgg
     1141 cggacgtcga agtgagcggc tgtaagcttc ccaccaagac actggtgctc gatcgtcctg
     1201 gcatcgcgcg cgtgctgtcg ttaccacccg ctcgcgatca cttcgcgtcg ccttacgtga
     1261 cctcgtatcg ggtcgtgcag ggcgtgctgc acaacccgaa gagcgaccgg cgcacgacgc
     1321 aaggcgtgtt tcacgtcgcg gaaggcggcc tgcccgtacc agccgacaag caagcggtcc
     1381 cgaagctcac tttcgcacgc ctgctggcgg cagcgctccg tccacctgcc gacgcgctgc
     1441 tcctgccgtt cagcgccgac gcgcccgtgg gtactcgcct gttcgcctcg ttgttgctgc
     1501 gtccgctcgt gtgtccgcgc agtgaccgcg acgtggagaa gcgcatggag gtgcgcttct
     1561 ttgcccccgg ctcgctcgtc agtaatctcg acttcgtcga gcgtatcttc ggcaacggcg
     1621 gcgatccgtt tctgcccgac aacgacgccg ggctcgacgt ggccggttgg acgggccaca
     1681 cgggctgcgt gatcctcgcg ccgcacctga cggggctcac gaagctcgag ctcggcttgc
     1741 cccacgccga ccaggcgacc ccgcgccaag tgcgcgacgg catgtgttac cgcgagcccg
     1801 gcgagctcta caacggtggc aacgccttca agatcacgtg ccgcgacgaa cgcggcgtga
     1861 tcgtcacgat catcgccgac aactactacg gctactgcaa gaaggagatc aagacgcaga
     1921 tcagttatgc cgcgaacctc tacggctcct gcgaggagga acacgcgggc ggcgtgctcg
     1981 cgtacccgag ctacgtgctc ggcgcgcact tcggcaaagc tcacagcttc gagctcaagc
     2041 cgacgacttt cgagcgagcc atgcaattac tcggcgaccg cgtggagcta aaacccggcc
     2101 gccacgccat cgaccgcaat ttccccgacc tccactacgt gcccgaggac gccgagttcg
     2161 acctagccgc tggacgcatc cattgggtcg ccggcggcga gcgaaaagag ctcacgttgc
     2221 gcgcgcgcga aatttacgtg ctgccttcgg gctacaaggt gcggatcgag aagcaggtcg
     2281 gtggcaccgc ctggcgtctg gtcggttcgc gtgccgacgg cgtgctctgt cacaagccgt
     2341 gcaccgtgtc gggcggtgga aagtccgaaa tctcgaagtc actgcagccg atgatcaagg
     2401 ctgcgccggc ctacgtcaga gattacgaac gcgatttcga atacgtctcg gagctcctcg
     2461 ccaaggattt ttctcacatc tacaggcccg gcaaaggcga cgggcgcagc tcgcgcccgc
     2521 cgctgagccc cgaacgctcg ctcgggtcca tcatcaagct cctcacgcct tcggacgact
     2581 acacggagga gcacaacgcc tgggtgcggg cgctgccgca gacgatccgt tcgctcgtct
     2641 tcatcgtgaa gcgctatcac ctgcccgcgt cgggcaatcc gaagtcacgc ttcaccgtcg
     2701 ataccgtcaa cggctttccg ggccacgagc tcaagctcga caatcagctg ctgctcacgg
     2761 ggcatttgcg ggtcggtttc gagccgggca cgtcactctg gcgcatgttc aagctgcggc
     2821 cggatttcca cgcggccgac aaggtgcagg tggaggacga catcaccgcg tc
//
LOCUS       DATIML010001333         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4030821, whole genome shotgun sequence.
ACCESSION   DATIML010001333 DATIML010000000
VERSION     DATIML010001333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4030821"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..914)
                     /gene="ttcA"
                     /locus_tag="VLJ38_22930"
     CDS             complement(75..914)
                     /gene="ttcA"
                     /locus_tag="VLJ38_22930"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF007972.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HSU42463.1"
                     /translation="MTRLEERLLTQVARASADFALLEPGDRVMVAMSGGKDSHALLHL
                     LREIARRAPFEFSLVAVNVDQGHPGFPKTLLPEYFRREGYDFEIVEEDTYSVVKEKVP
                     EGKTFCSLCSRLRRGILYTQAVALGCTKIALGHHRDDVIETLLLNLFFSGQIKAMPPR
                     LRSDDGRNVVIRPLAYVAEADLEAFAAEREFPIIPCDLCGSQEQLQRKRVKALLATLE
                     AENPNVRRNLLAALGNVRPTHLLDHELRAKLGLVEANESDDARVPLLTLGRSLGAPIG
                     DAE"
     gene            1001..>1600
                     /locus_tag="VLJ38_22935"
     CDS             1001..>1600
                     /locus_tag="VLJ38_22935"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSU42464.1"
                     /translation="MSFSQVAQIVVIVLAFFGVYGFVATARDGETRRACTALCALHPD
                     YAARNRAAPDFELPDLDGRPVRLASFRGKTVILHFWTKTCRPCLEELPHIADFAKVLK
                     PYAGKVELVTITTDESAEDARATLTSVIGSTNDFTVLIDPDGDKVVSGKYGTKLFPET
                     WFIDPKGVIRARFDGPRDWDNALPLDLAQALTAPIPCEVA"
BASE COUNT          270 a          576 c          496 g          258 t
ORIGIN      
        1 gccgagacgc gccgttcccc gcgctcacac gccgtacgtc gccgtcactc cgcgtcacgc
       61 gccctacgtc gccgtcactc cgcgtcgccg atgggcgcgc cgagcgacct cccgagcgtg
      121 aggagcggca cgcgcgcatc gtcactctcg ttcgcttcga cgagaccgag cttcgcgcgg
      181 agctcgtgat ccaaaaggtg cgtcgggcgc acgttgccga gcgcggccaa gagattccgc
      241 cgcacgttcg ggttttcggc ttcgagcgtc gcgagcagcg ccttcacgcg cttacgctgg
      301 agctgctcct gcgatccgca caaatcacac ggaatgatcg gaaactctcg ctctgccgcg
      361 aacgcctcga ggtcggcttc cgccacgtaa gcgagcggcc gtatcacgac attccgcccg
      421 tcgtccgagc gcagccgcgg cggcatggct ttgatctgcc ccgagaaaaa caaattgagc
      481 agcagcgtct cgatcacgtc gtcgcggtga tggccgagcg cgatcttggt gcagccgagc
      541 gcgaccgctt gcgtgtacag aatgccgcgg cgtaggcgcg agcacagcga gcagaacgtc
      601 ttaccctcgg gtaccttctc tttgacgacc gagtacgtgt cctcctctac gatctcgaag
      661 tcgtaacctt cacggcgaaa gtattcgggc aagagcgtct tcggaaatcc cgggtgcccc
      721 tgatcgacgt tgaccgcgac gagcgaaaac tcgaacggcg cgcgccgcgc aatctcgcgc
      781 agcaggtgga gcaaggcatg cgagtccttg ccgccgctca tggcgaccat gacgcggtcc
      841 ccgggctcga gcagcgcaaa atcggcgctg gcgcgcgcga cttgggtgag caggcgctct
      901 tcgagccggg tcatgaggcc cggcgttttg ccgcgaaccc agccctgccg caagtagacg
      961 cggggaggcg cccgcgcgcc cggagtggta aacaggggac gtgagcttct cgcaggtcgc
     1021 acaaatcgtc gtcatcgtgc tcgccttctt cggcgtttac ggcttcgtcg cgaccgcgcg
     1081 cgacggcgaa acccgccgcg cttgcacggc tctgtgcgcg ctccaccccg actacgccgc
     1141 ccgcaaccgc gcggcgcccg acttcgagct ccccgacctg gatggccgcc ccgtccggct
     1201 cgcgagcttc cggggcaaga cggtgatcct gcacttctgg accaagacgt gccgcccctg
     1261 cctcgaggag ctgccgcaca tcgccgactt cgccaaggtg ctcaagccct acgccgggaa
     1321 ggtcgagctc gtcacgatta cgaccgacga aagcgccgag gacgcgcgcg cgacgctcac
     1381 ctccgtcatc ggttcgacca acgacttcac cgtcctcatc gatccggacg gcgacaaggt
     1441 cgtcagcggc aagtacggca ccaagctctt ccccgaaacg tggttcatcg atcccaaggg
     1501 cgtcatccgc gcgcgcttcg acggcccgcg cgactgggat aacgccctcc cgctcgatct
     1561 cgcccaagcg ctcacggcgc cgatcccgtg tgaggtcgcc
//
LOCUS       DATIML010001334         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3169640, whole genome shotgun sequence.
ACCESSION   DATIML010001334 DATIML010000000
VERSION     DATIML010001334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3169640"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VLJ38_22940"
     CDS             complement(<1..266)
                     /locus_tag="VLJ38_22940"
                     /inference="COORDINATES: protein motif:HMM:NF016693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSU42465.1"
                     /translation="MTHTDVIVIGGGPAGSTVATRLAQRKRSVRLFEKERFPRFHIGE
                     SLLPCSIPLFEQLGVLPDLTDGRFLPKYAAEFVSADGATRQRYP"
     gene            complement(344..1339)
                     /locus_tag="VLJ38_22945"
     CDS             complement(344..1339)
                     /locus_tag="VLJ38_22945"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSU42466.1"
                     /translation="MPGEDHNQPKRVLLVDDDSVSRSVLAKQLAARGYEIMEADSGGS
                     ALRVLTQQNAPRMAVVDWNMGTINGPELCRILRGRSPYVYVVLTTAREGRRPLVEAMN
                     SGADGYIQKPVDVDELEAWLVAGQRIVELQDGLLKAHAELERRATHDALTGVRNRGSL
                     LEILGRELRRSRRTKSATGIVIFDVDHFKRVNDTYGHPVGDEVLVEFAARCARAVRDY
                     DVIGRYGGEEFLLVLPGGSLPDAAAVGSRLLDGVSRRPFTTSAGELTVTASAGAASTG
                     QGYLDPDALIAAADAALYEAKHAGRARLHVAVEAGQPESARFRDDEPATLKGPDH"
BASE COUNT          229 a          529 c          515 g          233 t
ORIGIN      
        1 aaagggtagc gctggcgcgt ggcgccgtcg gcgctcacga attccgcggc gtacttcggc
       61 aaaaagcggc cgtcggtcag gtccggcagc acgccgagct gctcgaacaa tgggatcgag
      121 cacggcagca gcgactcacc gatgtgaaac cgcgggaagc gctccttctc gaacaggcgc
      181 acgctgcgct ttcgctgagc gagccgcgtc gcgacggtcg agcccgccgg accgccgccg
      241 atgacgatga cgtccgtgtg agtcaccggc cgagcataga cgaacgccgg gctacggcta
      301 cccgaacggc gccgtcacgc tcaggcggcc acttgcacgc cgttcagtga tcggggcctt
      361 ttagcgtggc aggctcgtcg tcccggaagc gcgcactctc cggctggccc gcttcgacgg
      421 cgacgtggag ccgcgcgcgg ccggcgtgct tggcctcgta gagcgccgcg tccgccgcgg
      481 cgatgagcgc gtcgggatcg aggtagccct gccccgtcga ggcggccccc gcgctcgccg
      541 tgaccgtgag ctccccggcc gaggtcgtga acgggcgccg ggaaacgccg tcgagcaggc
      601 ggctgccgac ggcggcggcg tcgggcaagc tgccgcccgg caagaccaag agaaattctt
      661 ccccgccgta gcggccgatc acgtcgtagt cgcgcacggc gcgggcacag cgcgccgcga
      721 actccacgag cacttcgtcg cccacggggt gaccgtacgt gtcgttcacg cgcttgaagt
      781 gatcgacgtc gaagatcacg atgccggtcg ccgatttggt gcgacgcgaa cgccggagct
      841 cgcgtcccaa aatttcgagc aggctgccgc ggttgcgtac gccggtgagc gcgtcgtgcg
      901 tcgcgcgccg ctcgagctcg gcgtgtgcct tgagcaggcc gtcttggagc tccacgatgc
      961 gctgccctgc cacgagccag gcctcgagct cgtcgacgtc gactggcttt tggatgtagc
     1021 cgtcggcgcc gctgttcatg gcctcgacga gcggccggcg accctcgcgc gccgtcgtga
     1081 gcacgacgta aacgtaaggc gagcgcccgc gcagaatgcg gcacagctcg gggccgttga
     1141 tcgtccccat gttccagtcg acgacggcca tgcgcggcgc gttctgttgc gtgagcacgc
     1201 gcagcgccga accgccgctg tccgcctcca tgatctcgta gccgcgcgcc gcgagctgct
     1261 tggcgagcac gctacggctc acgctgtcgt cgtcgacgag cagcacccgc ttcggctgat
     1321 tgtgatcttc ccctggcatc cgagctctct caggaaggcc cgaagaaacg ttttaccaga
     1381 ggtgccttcg cgtgggcatc cctgcgtccg agctcgatga gctcccgggc aaaaccgccg
     1441 tcgaacagca ggtacgacgc ccaatccgcc tcgcccccgg gcgtctcggt ggccgtacgc
     1501 tccagg
//
LOCUS       DATIML010001335         1816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_861486, whole genome shotgun sequence.
ACCESSION   DATIML010001335 DATIML010000000
VERSION     DATIML010001335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861486"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VLJ38_22950"
     CDS             <1..182
                     /locus_tag="VLJ38_22950"
                     /inference="COORDINATES: protein motif:HMM:TIGR02232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42467.1"
                     /translation="EVNGVPYTSLPEAGCATGCRWPSYCGDGVIDASFGEECDDGAQN
                     GGKRCSTYCTLKFIF"
     gene            228..>1816
                     /locus_tag="VLJ38_22955"
     CDS             228..>1816
                     /locus_tag="VLJ38_22955"
                     /inference="COORDINATES: protein motif:HMM:NF016330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HSU42468.1"
                     /translation="MQALFDAMRRASLPAVWSQGVKLARADAVSSAAGSPAAITVRVR
                     ARGHAVAPTVTLYPEENEWSCDCGGAADPCMHAVAAVIATREGNSQAATAEAPSPAPQ
                     ARLVYRLGTRGKTLTVERSIVHADGREQPVTGLASLVATGALPAGINPTHDDLSIDRL
                     LTAHRDVLPLARLPGLLAALASAEHVTLGAGSVKASGDLLLPRAVVDDAPGGGFTLTL
                     ERDPAITQIVAEGVARTGDTLRPLGETQATGLLLERLPLARVFSREQQADLVTVVLPE
                     IETRLSVEMRTARLPRPTTTARPRILFDLSHHGHALSVLPLLVYGEPPLLRVDGDTAT
                     ALADHAPVRRRDEERALLRKLRDDLNLVTGRRVDFDGSEAAAFAAKLRGWQQRTAEGP
                     RRDLFAPRPLLPRIELADDAFDVSFETDGDEEREDAAPRRATVAAVFSAWRDGLELVP
                     LEGGGWAPLPAGWLEKHGHLVQELLTARDAERRVPTALLPALGTLADSLGLARPAALA
                     RLKPLLEDFAGIPNAPLPSDL"
BASE COUNT          261 a          653 c          639 g          263 t
ORIGIN      
        1 acgaggtcaa cggggttccg tacaccagct tgccagaggc cggctgcgcg actgggtgcc
       61 gctggccgag ctactgcggc gacggtgtca tcgacgcatc cttcggcgaa gaatgcgacg
      121 acggcgcgca aaacggcggc aagcggtgct cgacgtactg taccttgaag ttcatattct
      181 aacccccact ggcgagaatg cgcttcggga gctaggacgg gcggctcatg caagccctgt
      241 tcgacgcgat gcgccgagcg agcctcccgg ccgtgtggtc gcaaggagtg aagctcgcgc
      301 gcgcggatgc ggtttcgagc gccgccggct cgcccgccgc gatcacggtg cgggtgcggg
      361 cgcgcggtca tgcggtcgcg ccgacggtga cgctctatcc cgaggagaac gagtggtcgt
      421 gcgattgcgg cggcgcggcg gatccgtgca tgcacgccgt ggcggccgtg atcgcgacgc
      481 gcgaaggcaa ctcgcaggcc gcgaccgccg aagctccgtc ccccgccccc caggcgcgcc
      541 tcgtctaccg gctcggcacg cgcggtaaaa cgctgaccgt cgagcggagc atcgtgcacg
      601 cggacggacg cgagcaaccg gtaacagggc tcgcgtcact cgtcgccacg ggcgcattgc
      661 ccgccggaat caaccccacg cacgacgatc tatcgatcga tcgcctgctc acggcccatc
      721 gcgatgtgct gccgctggcg cgcttgccgg ggctgctggc ggcgctcgcc agcgcggagc
      781 acgtcacgct cggtgcgggc agcgtcaaag cgtccggcga tttgctgtta ccgcgcgccg
      841 tggtcgacga cgcgccgggc ggcggtttca cgctcacgct cgagcgcgat cctgcgatca
      901 cgcagatcgt cgccgagggc gtcgcgcgca cgggcgacac gctgcgcccc ctcggagaaa
      961 cacaggcgac gggcctcttg ctcgaacgac tcccgctcgc gcgcgtcttc agccgcgaac
     1021 agcaggccga cctcgtcacg gtcgtgctgc ccgagatcga aacgcggctc agcgtggaga
     1081 tgcgcacggc gcggctgccg cggcccacga cgaccgcgcg gcctcgcatc ctcttcgacc
     1141 tttcgcacca cggacacgcc ctgtcggtct tgccgctctt ggtctacggc gagcccccgc
     1201 tcttgcgcgt cgacggcgac acggcgaccg cgctcgccga ccacgcgccc gttcgccgcc
     1261 gcgacgagga gcgcgcgctc ttgcgcaagc tgcgcgacga tttgaacctc gtcacgggac
     1321 ggcgcgtcga cttcgacggc agcgaggcgg ccgctttcgc ggcgaagctc cggggttggc
     1381 agcagcgcac ggcggaggga ccacgacgcg atctgttcgc gccccggccg ctcttgccgc
     1441 gcatcgagct cgccgacgat gctttcgacg tgagcttcga aaccgacggc gacgaggagc
     1501 gcgaggacgc ggcgccgcgg cgagcgacgg tcgccgccgt gttttccgcc tggcgcgacg
     1561 ggctcgagct cgtgccgctc gagggcggcg gctgggcgcc cttgccggcg ggttggctcg
     1621 aaaagcacgg gcatctcgtg caagagctct tgacggcgcg cgacgcggaa cggcgcgtgc
     1681 ccacggctct tttgcccgcg ctcggaacgc tcgcggactc gctcggcctc gcgcgtccag
     1741 cggcgctcgc gcgcctcaag ccgctgctcg aggatttcgc cggcatcccg aacgcgccgt
     1801 tgccgagcga cttgaa
//
LOCUS       DATIML010001336        16136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_572431, whole genome shotgun sequence.
ACCESSION   DATIML010001336 DATIML010000000
VERSION     DATIML010001336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 16136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16136
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_572431"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VLJ38_22960"
     CDS             complement(<1..982)
                     /locus_tag="VLJ38_22960"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSU42469.1"
                     /translation="MSGHGAAGSKGLGTRAVQALALGVTFGMLYAATRLTPELEGELG
                     AVAGVGFLLLAGTLMSELLETIGLPHLSGYLLAGIIGGPDVFKLVDHHTVDQLSPVNT
                     LALALIALAGGVELKLSTLRQVAKSLTYAMVIQSVIVGVVMAFAMFLLGRFVPSFSAL
                     ATAPMLGVALLWGVLSITRSPSACMGILSQTRAKGPVATFALAFIMSSDIVVVVLVAA
                     VMMLARPLINGSGGFSVRDVQDLGHELLGSIAFGTTLGLALAAYLKLVGRGLLLLLLA
                     IGFVLSDFLRYVKVDATLAFMVAGFVVQNLTAQGEKLLHAIEQTGNVVFVV"
     gene            complement(979..2274)
                     /locus_tag="VLJ38_22965"
     CDS             complement(979..2274)
                     /locus_tag="VLJ38_22965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kef"
                     /protein_id="HSU42470.1"
                     /translation="MSGGVTLLLGLLVVAFVSSMLVGGRTIRGFGLPSGAEYLVLGVG
                     VGPHGLGILPRSTVHAFAPVFVCAAAWLAFVIGLGYLIVGRRRVHVTRAVTGVLTATL
                     VGAAVAAALFFAVNALGVLSGFPRLALALASGFVGCETTRHTVRWVAERHGAQGKLSD
                     WLADMARASALVPVLGLGALFAFVPDSPLGGFAVGLRVAAGAGIGTVMGLVAAVLLGR
                     EFRRDESWGILLGTSLLAAGVAMRLGLASVATLFVMGLTLSLVSRHRLEIKFMVQGTE
                     KPVLLPVALVAGACVDFDPLPHVWVLVAVALAARLLAEVLRGLLLVALVPAARPAGPR
                     IGLGMASTGAISLALAYTLTVRLPGPASSAVLLLAAAGVLLGELVGPAELRHALERAG
                     ETHAVNAETEMEPLSLPSSALRASDYPDPQRRSDYPEGP"
     gene            complement(2271..4124)
                     /locus_tag="VLJ38_22970"
     CDS             complement(2271..4124)
                     /locus_tag="VLJ38_22970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HSU42471.1"
                     /translation="MNLVPVTFKLPGSHVRAAALALLLAGVAHAQPAPPPPSESAPHA
                     LAPAFLHPSAGAAAVGSAHAAAAPSAVASSLPVAEVAPVAPSAIEPVAVDSAPPSATT
                     APAAPAPAASPPPPAPSASSRPVSSALPVPVAPPQQHVAPAPSGSAPATAVGHVKLGD
                     DEVFTIRTPRSGKTPEQRAQAATAALAAVLEHVHGGDVRYERHGELAVVLAGQTPIIE
                     LTPEDAQASGASSVDLHAASVTAALRSAIEREHRQAALSKTVFSISLLVFLGLIAFYL
                     MQKIGEFAERARAWIDAHAEEVLAVRVRRIEVVSPGTVRSTALVGLSVGHRLAQVGVF
                     YAWLVFVLSLFDATSGYTEKLTGLIVTPLSQLTTRIATGLPVLAVLVIAGFAVFVLVR
                     FLGLFFDSIERRENVVTWVTPELAAPTSALLRLGVVLAALVFLAPLVTGNPESALART
                     GVVVVVALGLAATPVLASGMLGAILLFGRRLRPGQHVEIGAFGGRISSIGLLDLRLED
                     AERAEVRIPHLYSLRHPTRVIGLRPRFELEIAVSALASHADVQSVLLRTAARLADDAR
                     VEITSADADRTLFRVFFASEQRNARSELQLALLDALAAAQVPLGRLGRGAS"
     gene            complement(4396..5622)
                     /locus_tag="VLJ38_22975"
     CDS             complement(4396..5622)
                     /locus_tag="VLJ38_22975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42472.1"
                     /translation="MGDHGVALASRFVVFAAALGFGCGSDPASPSAADEPPGEPAAAA
                     RDVAALLGAGGSAPPAFTLIFDATTADAVLPFYPTALAFNPAIDGELWITLRQPLTGS
                     PCDQGDTTGCPWLLGRVAVVHGATAAPESVLNVELKQDANAWHFMRRPTSISFNADDT
                     FATCAEARTSNYEDVDTPYNGPVLWSADPAIFGAPPPAHSPTGSTHIDMLHESPYCMG
                     IAHERDNVYWTFNGDAGSLDRYDFHAPHEPGGDDHSDGELERYVTGELSRVPDVPSHL
                     AFDPDSRLLYAADSGHGRVVALDTTSGEPGAEVTTYDPIRIHAAVDGAELREIVKGGR
                     LGVPSGLTLYAGVVFVTDALTSRIVAYDTLGHTLASLRTGLPPGSLGGITIGPDGRAY
                     FADAVGRRVLRIDPAP"
     gene            5735..6994
                     /gene="serB"
                     /locus_tag="VLJ38_22980"
     CDS             5735..6994
                     /gene="serB"
                     /locus_tag="VLJ38_22980"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HSU42473.1"
                     /translation="MTQHDFPDRIVLHIAGTDRPGVTARLTEIIAEENADLVDIGQSV
                     LHGYLMLSAIVDIPTTSNAFRKILFAVADLGLRLEVSAYRTEHAVRSHAAAALAVTVL
                     GPLADGGATARITRFMAERDMNIREIRSLSDSELNGLELIVDLKPGGEPDLNELMDLR
                     GKLLQLGTELGVDLAVQRDDIFRRDKRLVCMDVDSTFVKGELIDELASLVGAKEQVAQ
                     ITARAMRGELDFKQALTERVKLLEGLPFEQAKSLADRSELTPGADRFVRLLQGLGYRI
                     GLVSGGFTFFVDDLKARFGLDFAVSNELEIADGKLTGRVRGSIVDGERKSQVLRDMAQ
                     AYRLRLGQTIAIGDGANDILMLQSAGLGIAFRAKPKLQAVADMSLNHHERLDTLLYLM
                     GYNARDLREAETVAGWSATPPKVGARL"
     gene            complement(7058..7720)
                     /locus_tag="VLJ38_22985"
     CDS             complement(7058..7720)
                     /locus_tag="VLJ38_22985"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU42474.1"
                     /translation="MSARSIGLSDELWRYLLDATVHEPPILGRLRDETAKLAEANMQI
                     SPEQGRFLAFLIEVLGVRRYLEVGVFTGYSSLSVALALPADGHIVACDRNDEWTRVAR
                     RYWTEAGVAPKIELKLGNGVETLGALLASGARGSFDFAFFDADKESSLTYYERGLELV
                     RQGGVLAFDNALWDGRVAQASDTSESTRSLRALNERVCSDSRVTATLVPIGDGVLLAR
                     KR"
     gene            complement(7724..7993)
                     /locus_tag="VLJ38_22990"
     CDS             complement(7724..7993)
                     /locus_tag="VLJ38_22990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HSU42475.1"
                     /translation="MAHLVDCIKLGHEAEGLEKLPFKGELGQRIYDHVSKEAWKQWLE
                     HSKMLINEYRLDLTSESGQRLWMTECEKFFFGDGSSAPAEFVPQS"
     gene            complement(8080..8268)
                     /locus_tag="VLJ38_22995"
     CDS             complement(8080..8268)
                     /locus_tag="VLJ38_22995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42476.1"
                     /translation="MTTHLRSFRFVLVAAGLTVAAPAFASAVTPLCGDEKGSQDENKG
                     KSDNNKKETPPKKPTNPA"
     gene            complement(8317..9621)
                     /locus_tag="VLJ38_23000"
     CDS             complement(8317..9621)
                     /locus_tag="VLJ38_23000"
                     /inference="COORDINATES: protein motif:HMM:NF019272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HSU42477.1"
                     /translation="MSRSSYAVLASSALLVALGCGNSDAPKEPTHEGAGGLRAAGAEA
                     GRGSGGEAALAGSAGVGVVTSGGGVGGVAGTPVHAGAAGSATLGGRPGAGGNSVSGAN
                     AGGRDEHASGGATSGGPGTSGGATAGDGGDSGVGPTTGTPAEVGLASLPVARQEHGVV
                     AVGGRVYVLGGYTPDVTASVLAYDPSADSWHAVADFPSPFNHPAAGVVGGKIYVAGYY
                     AGSSLTGPATGRTYVYDPAADGWTEKKRMTSGSERAGGCVAVLGSELYVFGGGNNGAA
                     TMFASVYDTASDTWTDLPPLPETREHCAAFASGGKLYIAGGRTHTIPEFRPTTLEFDP
                     ATQAYSEKTPIPTPRGGLAGAVLGGRLFVFGGEGADNELGVFDDIDAYDAVTDSWQKF
                     PALIVPRHGFGAATLGERIYLPGGAIHQGGAATDAVTTFYFE"
     gene            complement(9773..10567)
                     /locus_tag="VLJ38_23005"
     CDS             complement(9773..10567)
                     /locus_tag="VLJ38_23005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42478.1"
                     /translation="MTKLIAFSAVPPLTLALVAACASNPGPAPAAASTAATPGAAATP
                     ASAGKLDSTPLADPVANVPPTCKNGTKAAGTGLIDDFEDGNDKAAPAGGRNGSWWIGK
                     ADHAVITLPKGPVKPSDGGPEGSKHAMHFVGKTDNADSWGAAVGVNFLPSGFYDASKY
                     AGIAFKIKSAKPNLDVRLKILDANTHPEGGVCKDCFNAFGRELILGTEWKDVSLMWSE
                     LTQQSDWGNPRPPMIEPSKLHDMEWQMWPGNDFDIWLDDVHFIECQ"
     gene            complement(10638..11306)
                     /locus_tag="VLJ38_23010"
     CDS             complement(10638..11306)
                     /locus_tag="VLJ38_23010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42479.1"
                     /translation="MLPRFVLALLPVPVVFAAGALASARVANQAGARGAQALGLFAEL
                     TRVSRAPASHDEADVIPTDVPVGSAPIAAPAGIPAPAPHASHAGKHTKPVPAPVIFVS
                     QKAVLGLAASGARPHGAPAPATAARPAGLRLMGVAALGIGLLDGDVLTRAVGAPALST
                     GAVIQAVLAARARHAPVLEGEVWRGDRRYVLRVEQPYLDERRSDAIEGEAPRGTPNAG
                     AQSG"
     gene            complement(11388..11852)
                     /locus_tag="VLJ38_23015"
     CDS             complement(11388..11852)
                     /locus_tag="VLJ38_23015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3293 domain-containing protein"
                     /protein_id="HSU42480.1"
                     /translation="MDQNLLRSYFGTIYELPLETGVVRVSIDGEVVKDTSQLPPILRQ
                     DFALVTAYNPRSMPLPRRINEARQQVLRDLLVLGCYRVEQCVGYDEEPEGPWREPAWL
                     VLGIPRDEAIGFGRTFRQNGIVYCRGARPELIVTDPTLDEIGRTFQGNWRIR"
     gene            complement(11918..12613)
                     /locus_tag="VLJ38_23020"
     CDS             complement(11918..12613)
                     /locus_tag="VLJ38_23020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSU42481.1"
                     /translation="MDEPRPKILIVEDDESITLGLQMNLEAEGYRVTVAMDGEDGLNQ
                     ALAGGFDLLVLDVMLPRMNGFELVRALRGKGEYVPVIMLSARGEEMDKVMGLELGAED
                     YITKPFGLAELLARVKAVLRRDGIVRRRGEQTMRAADLEVNPRSREVRRDGALVELTA
                     TEFDVLWALIEANDRALTREELLERVWGPGHHVTLRTIDNFVLQLRSKLERDPTEPRH
                     LVTVRGVGYRFKP"
     gene            complement(12618..13586)
                     /locus_tag="VLJ38_23025"
     CDS             complement(12618..13586)
                     /locus_tag="VLJ38_23025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU42482.1"
                     /translation="MPSRDPSAMGYRRIVSLLVALVVVPTSLLLLLGVVLLFIGEAAV
                     NILMGILVLALSGAAVTGVVLVWVFVRREANLSRLQSDFVSKVSHELRTPLTSIRLFA
                     ETLAFRRGDAAAAEKCIEGLSKESTRLQELIDRLLDWGRMESGGREFVLKDTDLRSIM
                     ETALEAFEPVRERRHVELAVTLPPESLLVRADRGAMSDALLNLLTNAYKYGGDPPRIE
                     ISYVQGARDVTICVRDNGHGIPATEHARIFQKFYRLDDRLSREREGSGLGLAIVKHVM
                     KAHRGRVELVSDPGKGSTFSLVLPSAPLAGSERAAARESIAPSTLA"
     gene            complement(13664..14044)
                     /locus_tag="VLJ38_23030"
     CDS             complement(13664..14044)
                     /locus_tag="VLJ38_23030"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSU42483.1"
                     /translation="MIASYEGSCHCGRVRFRVRGDLDETVVCNCTICTQKGILHLIVP
                     LGAFELVSGDAELTSYRFNTGLAKHTFCRHCGVHPFYVPRSHPDKMDVNVRCLAGVDV
                     TALSPRPFDGQHWEQAMAAGQAGE"
     gene            complement(14093..15031)
                     /locus_tag="VLJ38_23035"
     CDS             complement(14093..15031)
                     /locus_tag="VLJ38_23035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42484.1"
                     /translation="MSRRALRTASACWVAAALVAAGCSRDIPLGYDVTNAGAPSGAAG
                     HSGAGMAGQSVGGSGGVPIAQGGAAGAPERECVPATCHGMKYACGDCMDNDHDGKIDA
                     EDPECTGPCDDLEDSFDVGLPGSGSDKCSQDCFFDNGNGAGNDGCRFSHQCDPLSVAP
                     DYPPTGSAACAYDENANVPGGNGSCADLRLDQAASCASVCGPLTPNGCDCFGCCELPA
                     GSFHFIGLGAAASTTPCTIDNLDDPQACPVCTQVKSCTNPCDPCESCVGRPEPLASCA
                     GTPACPDTLKQCDFAGPKLCLQGFYCVTGCCVAEPR"
     gene            complement(15028..15750)
                     /locus_tag="VLJ38_23040"
     CDS             complement(15028..15750)
                     /locus_tag="VLJ38_23040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42485.1"
                     /translation="MNEPKRFSDATSDAPDELRRLFQAGVEDLPGEAELASLALRLGP
                     VFEPPPSSRPIKLSTAGKVAAVSAVVVGSAVLFALNFGPHGQRPPDAPERWTPSETPP
                     PPSAQALPPAASGDTAGKSGTPDTGAGAAPEPSGAASSPSPSAGAHASGAAARPAESE
                     AELLERARAALASNPARALALTEQDRTRFPAGVLTQEREVIAIEALKRLGRSDEAARR
                     AADFARRYPGSAYRKKLDTGRP"
     gene            complement(15747..>16136)
                     /locus_tag="VLJ38_23045"
     CDS             complement(15747..>16136)
                     /locus_tag="VLJ38_23045"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU42486.1"
                     /translation="HRKLAEFEGRSSLKTWLYGICLRVAADHRRRAHVRNERAQADPA
                     EHLAAAGELQPDVRAETRAQLQALLATLDEDKRTVLVLYELEGLTMKEVAEAIGCPLQ
                     TAYSRLHAARERVLAALSAARERGSMP"
BASE COUNT         2671 a         5529 c         5609 g         2327 t
ORIGIN      
        1 agacgacgaa gacgacgttg cccgtctgct cgatggcgtg gaggagcttt tcgccctgcg
       61 ccgtcaggtt ttgcacgacg aagcccgcga ccatgaacgc gagcgtcgcg tccaccttga
      121 cgtaacggag aaagtcgctg agcacgaagc cgatcgcgag caagagcagc aagaggccgc
      181 ggccgacgag cttcaggtac gccgcgagcg cgagcccgag cgtggtcccg aaggcgatgc
      241 tgccgagcaa ttcgtggcca agatcctgca cgtcgcgcac ggaaaaaccg ccggagccgt
      301 tgatgagcgg ccgcgcgagc atcatgaccg ccgccacgag cacgacgacc acgatgtcgg
      361 aggacatgat gaaggcgagc gcgaaggtcg cgaccgggcc tttggcgcgc gtctgcgaga
      421 ggatacccat gcacgccgag ggactgcgcg tgatactgag cacgccccag agcagcgcga
      481 cgccgagcat cggggcggtc gcgagggcgg agaaagacgg gacgaagcgc ccgagcagga
      541 acatcgcgaa cgccatcacg acgccgacga tcacgctttg aatcaccatc gcgtaggtga
      601 ggctcttggc gacctgacgc agcgtgctga gctttagctc gacaccgccc gcgagggcga
      661 tgagcgcgag cgccagcgtg ttgaccggtg acagctgatc gaccgtgtga tgatcgacga
      721 gtttgaagac gtctggaccg ccaatgatgc cggcgagtaa gtagcccgag aggtggggca
      781 gcccgatcgt ctcgagcagc tcgctcatga gcgtgcccgc gagcagcaaa aagccgaccc
      841 ccgcgaccgc gccgagctcg ccctcgagct cgggcgtgag gcgcgtcgcg gcgtaaagca
      901 tgccgaaggt gacgcccagc gcgagcgcct gcacggcgcg cgtcccgagg cctttggagc
      961 cggcagcgcc gtgcccgctc atggtccctc cgggtagtcc gagcggcgct gggggtcggg
     1021 gtagtcggac gcgcgaagcg ccgagctcgg cagcgagagc ggctccatct cggtctcggc
     1081 gttgacggcg tgcgtctcgc ccgcccgctc gagcgcgtgg cggagctcgg ccggtccgac
     1141 gagctcgccg agcagcacac cggccgccgc cagcagcagc accgcgctgc tcgccggacc
     1201 cggcagtcgc acggtcaacg tgtacgcgag cgcgagggag atggcgcccg tcgacgccat
     1261 gccgaggccg atgcgggggc cggcaggccg cgccgcgggc acgagcgcga cgagcaagag
     1321 tccgcgtagg acctcggcga gcagacgcgc ggcgagggct accgcgacga gcacccacac
     1381 gtggggcagc ggatcgaaat cgacgcaggc gcccgcgacg agcgcgacgg gcagcagcac
     1441 gggtttttcg gtgccttgca ccatgaactt gatctcgagc cggtggcgcg aaacgagcga
     1501 gagcgtgaga cccatcacga acaacgtcgc gaccgaagcg aggccgaggc gcatcgcgac
     1561 gccggcagcg agcagcgacg tgccgagcaa gatgccccag ctctcgtcac gccgaaactc
     1621 acgcccgagc agcacggccg ccacgaggcc catcaccgtg ccgatgcccg cgcccgcagc
     1681 gacccgtaag cccaccgcga agccgcccag cggggagtcc ggcacgaacg cgaacagcgc
     1741 gcccaagccg agcacgggca cgagcgcgct cgcccgcgcc atgtccgcaa gccaatcgct
     1801 gagcttgccc tgcgcgccgt gacgctcggc cacccagcgc acggtgtgcc gcgtggtttc
     1861 gcagccgacg aaaccggacg cgagcgcgag cgcgaggcgc gggaaaccag agagcacacc
     1921 gagcgcattc accgcaaaaa acagcgccgc agcgaccgct gcgcccacga gcgtggccgt
     1981 gagcactccg gtcacggcgc gcgtcacgtg cacgcgccgt cgcccgacga tgaggtaacc
     2041 gagtccgatc acgaacgcga gccacgccgc cgcgcacacg aacaccggcg caaaggcgtg
     2101 cacggtcgag cgcggcaaga tgccgagccc gtgcggcccc acgccgaccc cgagcacgag
     2161 gtactccgcg cccgagggca agccgaaacc gcgaatggtg cggccgccga cgagcatgct
     2221 gctcacgaag gccaccacga gcaggccgag caggagcgtg acgccgccgc tcacgaggca
     2281 ccgcggccca gccgcccgag cggcacctgc gccgcagcga gcgcgtcgag cagggcgagc
     2341 tggagctccg aacgggcatt gcgctgctcg gaggcgaaga aaacgcgaaa tagcgtgcga
     2401 tccgcgtcgg cgctcgtgat ttccacgcgt gcgtcgtcgg cgaggcgcgc ggccgtacgg
     2461 agcaagacgc tctgcacgtc ggcatgcgaa gcgagcgccg acacggcaat ctcgagctcg
     2521 aagcgcggac gcagcccgat gacgcgcgtt gggtgacgca gcgaatagag gtgcgggatg
     2581 cgcacctcgg cgcgctcggc gtcttcgagt cgcaaatcga gtaggccgat gctcgagatc
     2641 cggccgccga acgcgccgat ctcgacgtgt tggcccggcc ggagtcgccg gccgaagagc
     2701 agaatcgcgc ccagcatgcc gctcgcgagc acgggcgtcg ccgcgaggcc gagcgcgacg
     2761 accacgacga cgccggtgcg cgcgagggcg ctctcggggt tgcccgtgac gagcggcgcc
     2821 aggaacacga gcgcggcgag cacgacgccg agccgcagca gcgcgctggt cggcgcagcg
     2881 agctcgggcg tgacccaggt cacgacgttt tcacgccgct cgatgctgtc gaagaagagg
     2941 ccgagaaacc gcaccagcac gaacaccgcg aagcccgcga tgacgagcac ggcgagcacg
     3001 ggcaggcccg tcgcgatacg cgtcgtgagc tgcgacagcg gcgtgacgat gaggccggtg
     3061 agcttttcgg tgtagccgct cgtcgcatcg aagagcgaga gcacgaacac gagccaagcg
     3121 taaaagacgc cgacctgcgc gagccggtgc ccgacgctga gcccgacgag cgccgtactg
     3181 cgcaccgtgc ccgggctcac gacttcgatc cgccgcacgc gcacggcgag cacctcttcg
     3241 gcgtgcgcgt cgatccaggc gcgcgcgcgc tcggcgaact ccccgatctt ctgcatcaaa
     3301 tagaaggcaa tcagcccgag gaagacgagg agcgaaatcg agaaaacggt cttcgacagc
     3361 gcggcttggc gatgctcgcg ctcgatcgcg ctcctgagcg ccgccgtgac gctcgccgcg
     3421 tgcaggtcga ccgagctcgc ccccgacgcc tgcgcgtcct cgggcgtaag ctcgatgatc
     3481 ggcgtctgac ccgcgagcac gacggcgagc tcgccgtgac gttcgtaacg cacgtcgccg
     3541 ccgtgaacgt gctcgaggac ggcagcgagc gcggcggtgg cggcctgggc gcgctgctcg
     3601 ggcgtcttgc cggagcgcgg ggtgcggatc gtgaagacct cgtcgtcacc gagcttgacg
     3661 tgacctaccg cggtcgcggg cgccgagccg gacggcgcgg gcgcaacgtg ctgctgcgga
     3721 ggagcgacgg gaacgggtaa cgccgaactc accggacgag acgaggcgct cggcgcgggg
     3781 ggcggcggcg aagcagcggg cgccggcgcg gctggcgcgg tcgtggcact cggcggcgcg
     3841 ctgtcgacgg caacgggctc gatcgcggag ggcgccactg gggcgacttc cgcaaccggc
     3901 aaactcgacg cgacggcgga cggcgcggca gcggcatgcg cactccccac ggctgcggca
     3961 cccgccgacg gatgcaagaa cgctggggcc agcgcgtgcg gagcgctctc gctcggcggc
     4021 ggcggcgccg gctgtgcgtg agccacgccc gcgagcagca gcgcgagcgc ggcggcgcgg
     4081 acgtgagacc ccgggagctt gaacgtcacc gggactagat tcatcgacga gccgtttcgt
     4141 ggatgaatag ctcgagtatt tccgagccgt tgaaggcggg atctcgaccc gtcctgtcgg
     4201 gcgacccgag cgagcgcgag ggcaagccgc gtccggcctc gccggttagt cgcgctgggt
     4261 tgtcgccgct cgtgccgatc gtgatctgtt cttccaagac tcacatgcct ttatcgggct
     4321 ggggcatccg ccccagctac ttctactcgg gaactcgtcc gcgcgaaaat aggcgaacgc
     4381 tcgagcgcgc gagtttcagg gtgcggggtc gatgcgcagc acgcggcgcc ccacggcgtc
     4441 tgcgaagtaa gcgcgcccgt ccggcccgat cgtgatgccc ccgagcgatc cgggagggag
     4501 cccggtgcgc agcgaggcga gcgtgtgccc gagcgtgtcg taggcgacga tgcggctcgt
     4561 gagcgcgtcc gtcacgaaaa ctactcccgc gtacaaggtg agtccgctcg gcacaccgag
     4621 ccggccccct ttcacgatct cgcggagctc ggccccgtcc acggcagcgt ggatgcgaat
     4681 cgggtcgtac gtcgtcacct ccgcgcccgg ttcaccgctc gtcgtgtcga gcgcgacgac
     4741 gcggccgtgt ccggagtcgg ctgcgtaaag cagccgcgag tcgggatcga acgcgaggtg
     4801 actcggcaca tcgggcacgc gcgagagttc cccagtgacg tagcgctcga gctcgccgtc
     4861 ggagtggtcg tcgccgcccg gctcgtgcgg cgcgtggaag tcgtagcggt cgagtgaacc
     4921 cgcgtcgccg ttgaacgtcc aatagacgtt gtcccgctcg tgcgcgatgc ccatgcagta
     4981 gggcgactcg tgcagcatgt cgatgtgcgt gctgcccgtg ggcgagtgtg caggcggcgg
     5041 cgcgccgaag atcgccgggt cggcggacca gagcaccggg ccgttgtagg gagtatcgac
     5101 gtcctcgtag ttgctcgtgc gcgcttcggc gcaggtcgcg aacgtgtcgt cggcgttgaa
     5161 ggagatcgag gtcggacggc gcatgaaatg ccaggcgttc gcgtcttgct tgagctcgac
     5221 gttcagcacg gactcgggag ccgccgtggc gccgtgaacg acggcgacac gcccgagcag
     5281 ccagggacag cccgtcgtat cgccttggtc gcagggggag ccggtcaaag gctggcgcaa
     5341 cgtgatccag agctcgccat cgatcgcagg attgaacgcg agcgccgtcg ggtagaaggg
     5401 caacacggcg tcggcggtcg tcgcatcgaa gatcaacgtg aacgccggcg gcgccgaacc
     5461 gccggcgccg agcagcgccg ctacgtcgcg cgccgcggcc gctggctcac ccggcggctc
     5521 gtccgccgcg ctcggtgacg ccgggtcgct gccgcaacca aagccgagcg cggcggcgaa
     5581 gacgacgaag cgggacgcga gcgccacgcc atgatctccc atgccggcgc gcttgcctca
     5641 acccgcatgc gcgtgagcag cccgcgcacc gggcatgatc tttcagcgtc aaagtcgaga
     5701 cgaaccgaca aagaatgcta aataggccgc ccccatgacg cagcacgact tccccgatcg
     5761 catcgtcctc cacatcgccg gcacggaccg gcccggtgtt accgcacgcc tcaccgaaat
     5821 catcgcggag gagaacgccg acctcgtgga tatcggccag tcggtgctgc acggctacct
     5881 gatgctctcg gcgatcgtcg atatcccgac cacgtcgaac gcattccgga aaattctgtt
     5941 cgcggtagca gacctcgggc tcaggctcga agtgagcgcc taccggacgg aacacgccgt
     6001 gcgctcgcac gcggcggccg ccctggccgt gacggtgctc ggaccgctcg ccgacggcgg
     6061 cgcgacagcg cgcatcacgc gcttcatggc cgagcgcgac atgaacattc gcgaaatccg
     6121 ttcgctcagc gacagcgagc tcaacgggct cgagctcatc gtcgatctca agcccggcgg
     6181 cgagcccgac ctgaacgagc tcatggatct gcgcggcaag ctgctgcagc tcggcaccga
     6241 gctcggtgtg gacctcgccg tccagcgcga cgacatcttc cgccgcgata agcggctcgt
     6301 gtgcatggac gtagactcga cgttcgtgaa aggcgagctc atcgacgagc ttgcctcgct
     6361 cgtcggcgcg aaggaacagg tcgcccagat cacggcgcgc gccatgcgcg gcgagctcga
     6421 cttcaaacaa gcgctcaccg agcgcgtgaa attgctcgaa ggcctgccgt tcgaacaggc
     6481 caagagcctc gccgatcggt ccgagctcac ccccggggcc gatcgcttcg tgcgcttact
     6541 ccaggggctc ggctaccgca tcggcctcgt gagcggcggt ttcaccttct tcgtcgacga
     6601 cttgaaggcg cgcttcggcc tcgacttcgc cgtgtcgaat gagctcgaaa tcgccgacgg
     6661 caagctcacg ggtcgtgtcc gcggctcgat cgtcgacggc gagcgcaaga gccaggtgct
     6721 gcgcgacatg gcgcaggcct atcgcttgcg cctgggtcag accatcgcga tcggcgacgg
     6781 agcgaacgac attctcatgc tgcagagcgc cgggctcggc atcgccttcc gcgccaagcc
     6841 gaagctccag gcggtcgccg acatgagcct caaccaccac gagcggctcg acactctgct
     6901 ctacctcatg ggctacaacg cgcgcgactt gcgcgaagcc gaaacggtcg cgggctggtc
     6961 ggcgacgccg cccaaagtgg gcgcgcggct ctgagtcagg cccacgccaa acggcccgcc
     7021 ctcggaccgc acgcaaccca cgccgtgagt cgtcaggcta gcgcttgcgc gccaggagca
     7081 ctccgtcgcc aatcggcacg agcgtcgccg tcacgcgcga gtcactgcac acccgctcgt
     7141 tgagcgcgcg aaggctgcgc gtcgattcgg aggtgtcgct cgcctgcgcg acgcgaccgt
     7201 cccaaagtgc attgtcgaag gccagcacgc cgccctggcg cacgagctcg aggccgcgct
     7261 cgtagtacgt gaggctcgac tccttatcgg cgtcgaagaa cgcgaaatcg aagctgccgc
     7321 gcgcgccgga cgcgagcagc gcgccgagcg tctcgacgcc gttgccgagc ttgagctcga
     7381 tcttcggggc gacgcccgct tccgtccagt agcgccgcgc gacgcgtgtc cattcgtcat
     7441 tgcgatcgca cgcgacgata tgcccgtcgg ccggcagcgc gagcgcgacg gacagcgagc
     7501 tatagcccgt gaacaccccg acctcgaggt agcgccgcac ccccagcacc tcgatcagga
     7561 acgcgagaaa gcgcccctgc tcgggtgaaa tctgcatgtt ggcttcggcg agcttcgccg
     7621 tctcgtcgcg cagccgcccg aggatgggcg gctcgtgcac ggtcgcgtcg agcaaatagc
     7681 gccagagctc gtcgctcaag ccgatcgaac gagcggacat ccctcagctc tgcgggacga
     7741 actcggcggg cgcgctcgag ccgtcaccga aaaagaactt ctcgcactcg gtcatccaca
     7801 agcgctggcc gctctcactc gtgagatcga gccggtactc gttgatgagc attttggagt
     7861 gctcgagcca ttgcttccac gcttctttcg aaacgtgatc gtagatgcgt tggccgagct
     7921 cgcccttgaa cggaagtttc tcgagaccct cggcctcgtg cccgagtttg atgcaatcga
     7981 ccaggtgcgc catgggatgg gggggcggag cttacccgca agagtgctcg agtcgagcgt
     8041 aaacgagcgc gccggcaatc gtcgcgcccg tggcgtgcct caggccgggt tcgtcggctt
     8101 cttgggcggc gtttccttct tgttgttgtc ggacttgccc ttgttttcgt cttgcgagcc
     8161 cttttcatcg ccgcagagcg gcgtgacggc ggaagcgaac gcgggagccg cgacggtgag
     8221 gcccgcagcg acgagaacga atcggaacga acgaaggtgc gtcgtcatgg caacgcaatc
     8281 ttgagccggc gcgcggcacc gtcaaggcac gcgcgtctat tcgaaataga aggtggtcac
     8341 ggcgtccgtg gcggcgccgc cctggtggat ggcgccgccc ggcaggtaaa tgcgctcgcc
     8401 gagcgtcgcg gcgccgaagc cgtgacgcgg cacgatgagc gccgggaact tctgccacga
     8461 atcggtcacc gcatcgtacg cgtcgatgtc gtcgaatacc ccgagctcgt tgtccgcacc
     8521 ttccccgccg aacacgaaga gccgaccgcc gagcacggca cccgcaaggc caccgcgcgg
     8581 cgtcggtatc ggcgttttct cggaatacgc ctgcgtcgcc ggatcgaatt cgagcgtggt
     8641 cggacgaaat tcggggatcg tgtgggtgcg tcccccggcg atgtagagct tgccgccgga
     8701 cgcgaacgcc gcgcagtgct cgcgtgtttc cggtaacggc ggcagatccg tccaggtgtc
     8761 gctcgccgtg tcgtagacgg acgcgaacat cgtggccgcg ccgttgttgc cgccaccgaa
     8821 aacgtagagc tcgctgccga gcacggcgac gcagccgccc gcgcgttcgc taccgctcgt
     8881 catgcgcttt ttttccgtcc agccgtcggc cgcgggatcg tagacgtagg tgcggcccgt
     8941 agcgggaccg gtcaggctcg agccggcgta atagccagcg acgtagatct tgccgccgac
     9001 gacacccgcc gccggatggt tgaacgggct cggaaaatcc gcgacggcgt gccagctgtc
     9061 ggcgctcgga tcgtaggcga gcacgctcgc cgtcacgtcg ggcgtgtagc cgccgagcac
     9121 gtagacgcga ccgccaacgg cgacgacgcc gtgctcttgg cgcgcgacgg gcaacgaggc
     9181 gaggccgact tccgccggtg tgcccgtcgt gggaccaacg ccactgtcgc cgccgtcacc
     9241 ggccgtggcg ccgccgctcg tgccgggacc gccgctcgtg gcgccaccgc tagcgtgttc
     9301 gtcgcgtccg cccgcgttcg cgccgctcac cgagtttccg ccggcgcccg gccgaccgcc
     9361 gagcgtcgcc gaacctgccg cgccggcgtg aaccggcgtg cccgcaacac ctcccacgcc
     9421 gccgccgctc gtcacgacgc ccactccagc gctacccgcc agcgcggctt ctcccccaga
     9481 gccgcgcccc gcctcggcgc ctgccgcgcg caacccgccc gcgccctcgt gcgtcggctc
     9541 cttgggcgcg tcactgtttc cgcagccgag cgcgacgagc agcgcgctac tcgcgagcac
     9601 ggcatagctc gagcgcgaca tcacgagagc gtagcgtacg tcgcagcgcc acaaaacgcg
     9661 aaacgggccg tgcggcgtcg aatccgtcgc acagcccgtc actcgacggc gttacagcgc
     9721 gccgctgccg tagtggcggt gaaaatgcag caccgtcacc cgcgtcagcg cgtcactggc
     9781 attcgatgaa gtgcacgtcg tcgagccaga tgtcgaagtc gttgcccggc cacatctgcc
     9841 actccatgtc atggagcttg ctcggctcga tcatgggcgg ccgcgggtta ccccaatcgg
     9901 actgctgcgt gagctcgctc cacatgagac tcacgtcctt ccactccgtg ccgagaatca
     9961 gctcgcggcc gaaggcgttg aagcagtcct tgcacacgcc gccctcgggg tgcgtgttcg
    10021 cgtcgaggat cttgagccgc acgtcgaggt tcggcttcgc cgatttgatc ttgaaggcga
    10081 tgccggcgta cttggacgca tcgtaaaagc cgctcggcaa gaagttgacg cccactgccg
    10141 cgccccacga gtccgcgttg tcggtcttgc ccacgaagtg catggcgtgc ttcgaacctt
    10201 cggggccgcc gtccgagggc ttcacgggtc ctttgggtag cgtgatgacg gcgtgatcgg
    10261 ctttgccaat ccaccacgag ccgttgcgac cgccggccgg cgccgccttg tcgttgccgt
    10321 cctcgaagtc gtcgatgagc cccgtccccg ccgccttcgt cccgttcttg caggtcggcg
    10381 gcacgttcgc gacgggatcc gcaagcggag tcgagtcgag cttccccgcg gaggccggtg
    10441 tggctgcggc gcccggtgtc gccgccgtcg aagcggcggc gggcgcgggc ccggggttgc
    10501 tggcgcaggc ggcgaccaga gccaaagtaa gcggaggaac ggcgctgaag gcgatgagct
    10561 tcgtcatggt ggtcaggcgc ccttgctacg acggctgagc gagcgcaggc aagcgccgag
    10621 cgtgacggag ccgctactca gccgctctgc gcgcccgcgt tcggagtccc gcgcggtgcc
    10681 tcgccttcga tggcgtccga gcggcgttcg tccaaatacg gctgttcgac gcggagcacg
    10741 tagcggcggt cgccccgcca cacctcgcct tcgaggacgg gcgcgtggcg ggcgcgggcg
    10801 gcgagcacgg cttgaatcac ggcgccggtc gagagcgcgg gggcgccgac ggcgcgcgtg
    10861 agaacgtcgc cgtccaaaag gccgatcccg agtgcggcca cgcccatcag tcgtagcccg
    10921 gcgggacgcg cggccgtcgc cggagccggg gcgccgtgcg gtcgcgcgcc cgaggcggcg
    10981 agcccgagca ccgccttttg cgagacgaaa atcacgggcg cggggaccgg cttggtgtgc
    11041 ttgcccgcat gactcgcgtg cggcgcgggc gcggggatgc cggcgggcgc ggcgatcgga
    11101 gcgctcccga ccggcacgtc cgtggggatc acgtcggcct cgtcgtgcga ggcgggcgcg
    11161 cgcgacacgc gcgtgagctc ggcgaaaagg ccaagcgcct gggcgccccg agctcccgct
    11221 tggttcgcga cgcgcgccga tgcaagcgcg cccgcggcga acacgacggg cacgggcaag
    11281 agcgctagca cgaagcgcgg cagcacccgc ctaccttaac acggagcgct cgcagcgcga
    11341 acgggcgctt ccgggcgccg aacgacgcgg ttttggcggc ctgcggctca gcgaatccgc
    11401 cagttaccct gaaaggtgcg gccgatttcg tcgagagtcg ggtcggtgac gatgagctcg
    11461 ggacgggcgc cgcgacagta aacgatgccg ttctgccgga aggtgcgacc aaaaccgatg
    11521 gcttcgtcgc gtggaatgcc gagcacgagc cacgcgggct cacgccaggg accctcgggc
    11581 tcttcgtcgt agccgacgca ctgctcgacg cgataacagc cgagcaccaa gagatcgcgc
    11641 agcacttgct gccgagcctc gttgatgcgg cgcggcagcg gcatgctgcg cgggttatac
    11701 gccgtgacga gcgcgaaatc ctgccgcagg atgggcggga gttgcgaggt gtccttcacc
    11761 acctcgccgt cgatggacac gcgcacgacg cccgtctcga gcggaagctc gtagatggtg
    11821 ccgaagtacg aacgaagcag attctggtcc acgggggacc gtctttagca taggtcccgc
    11881 ggcaacggtc tgtgccgcgc ctgcggctct gcccgagcta tggcttgaac cgatagccga
    11941 cgccgcgcac cgtcacgagg tgacgcggtt ccgtgggatc ccgctcgagc ttcgaccgta
    12001 gctggagcac gaagttgtcg atcgtgcgca gcgtcacgtg gtggccgggc ccccagactc
    12061 gctccagtaa ctcttcgcgc gtgagcgcgc gatcgttcgc ttcgatgagt gcccagagca
    12121 cgtcgaactc cgtcgccgtg agctcgacga gcgcgccgtc gcggcgcact tcgcgcgagc
    12181 gcgggttcac ttcgagatcg gcggcgcgca tcgtctgctc gccgcgccgg cgcacgatgc
    12241 cgtcgcgacg aagcacggcc ttcacccgcg cgaggagctc ggcgaggccg aagggcttgg
    12301 tgatgtaatc ctcggcgccg agctcgaggc ccatcacctt gtccatttcc tcgccgcgcg
    12361 cgctcagcat gatgacggga acgtattcgc ccttgccgcg cagggcgcgc acgagctcga
    12421 acccgttcat gcgcggcagc atcacgtcga gcacgagcag atcgaagccg ccggcgagcg
    12481 cttggttcaa gccgtcctcg ccgtccatcg cgaccgtgac gcgatagccc tcggcttcga
    12541 ggttcatctg caagccgagg gtgatgctct cgtcgtcctc gacgatcagg atcttggggc
    12601 gaggctcgtc catggtctta ggccagcgtc gacggcgcga tgctctcgcg cgcggcggcg
    12661 cgctcggagc ccgcgagggg cgccgacggt aaaactaacg aaaatgtgct gccttttccg
    12721 ggatcgctca cgagctcgac gcggccacgg tgcgccttca tcacgtgttt gacgatggcg
    12781 aggccgaggc ccgaaccctc gcgttcgcgc gagaggcggt cgtcgagacg gtagaatttt
    12841 tggaagatgc gcgcgtgctc cgtggcggga atgccgtggc cgttgtcgcg cacgcagatg
    12901 gtcacgtcgc gcgcgccctg cacgtacgaa atctcgatgc gcggcgggtc gccgccgtat
    12961 ttgtacgcgt tcgtgagcag gttcaagagc gcgtcgctca tggcgccacg gtcggcccgc
    13021 acgagcagcg actcgggcgg cagcgtgacg gcgagctcga cgtggcgccg ctcgcgcacc
    13081 ggctcgaacg cctcgagcgc ggtttccatg atcgagcgca ggtccgtgtc cttcagcacg
    13141 aactcacgcc cgccgctctc catgcgtccc cagtcgagca gtcgatcgat gagctcttgc
    13201 aggcgcgtgc tctccttcga cagcccctcg atgcacttct ccgccgcggc ggcgtctcca
    13261 cgccggaacg cgagcgtctc ggcgaacagc cgaatcgagg tgagcggcgt gcgcagctcg
    13321 tgggagacct tcgacacgaa gtcgctctgc agccgcgaaa ggttcgcctc gcgccgcacg
    13381 aacacccaaa ccagcacgac ccccgtgacc gcagcgccgc tcaaggcgag caccaagatc
    13441 cccatcaaaa tgttgaccgc cgcttccccg atgaagagca ggacgacacc gagcagcagt
    13501 aacaaagagg tcggcacgac cacgagcgcg accagcaagc tgacgatgcg tcggtagccc
    13561 atggcggacg gatcacggct cggcatggcg cctcggtgcc gctagcttgc cacgttcccg
    13621 gcgaaggcgt cgaactgccg cgcagcgccg cggcgagagc gcttcattcg ccggcctgcc
    13681 ccgccgccat ggcctgctcc cagtgttggc cgtcgaacgg gcgcggcgac agcgccgtca
    13741 cgtcgacgcc cgcgaggcag cgcacgttca cgtccatttt gtcggggtga gagcgaggaa
    13801 catagaaggg atgcacgccg cagtggcggc agaaggtgtg cttggcgagg ccggtgttga
    13861 aacggtagct cgtgagctcc gcgtcaccgc tcacgagctc gaacgcgccg agcgggacga
    13921 tgaggtgcaa aatgcccttc tgcgtgcaga tcgtgcagtt gcagacgacg gtctcgtcga
    13981 gatccccgcg cacgcggaaa cgcacgcgac cgcagtggca gctgccctcg tagctcgcga
    14041 tcatgttcgt gtcctagcaa tcgcccgagg cgatcgccat cgcggcgtag actcagcgcg
    14101 gctcggccac gcaacacccg gtcacgcagt aaaaaccctg gaggcagagc ttcggaccgg
    14161 cgaaatcaca ttgcttgagc gtgtcggggc aggcgggggt gcccgcgcaa ctcgcgagcg
    14221 gctcggggcg gccgacgcaa ctttcgcagg ggtcgcaggg attggtgcac gacttgacct
    14281 gggtacacac cgggcacgct tgcgggtcgt cgagattgtc gatcgtgcac ggggtcgtgc
    14341 tcgcggccgc gccgagcccg atgaaatgga agctgcccgc cgggagctcg caacagccga
    14401 agcagtcgca accgttcggc gtgagcggac cgcacacgct cgcgcacgat gccgcctggt
    14461 cgagccgtag atccgcgcag ctgccattgc cgcccggcac gttggcgttt tcgtcgtacg
    14521 cgcacgcggc ggagccggtc ggcgggtagt cgggcgcgac ggagagcgga tcgcactggt
    14581 ggctgaagcg gcagccgtcg ttgcccgcgc cgttgccgtt gtcgaagaag caatcctgac
    14641 tgcatttgtc ggagcctgag ccgggcaagc ccacgtcgaa tgagtcttcg aggtcatcgc
    14701 aggggcccgt gcactcggga tcttcggcgt cgatcttgcc gtcgtgatcg ttgtccatgc
    14761 agtcgccgca cgcgtacttc atgccgtgac acgtcgccgg cacgcactcg cgctcgggtg
    14821 ctcccgcggc gcccccttgc gcgatcggta cgccgccgct gccgccgacg gactgcccgg
    14881 ccattccggc acccgaatgc cccgctgcgc cgctcggcgc tccggcgttc gtcacgtcgt
    14941 agccgagcgg aatgtcacgc gaacagcccg ccgcgaccag agccgcggcg acccaacacg
    15001 cgctcgccgt acggagcgcg cgccggctca tggccggccc gtgtcgagtt tctttctgta
    15061 ggcggagccg ggataacgac gcgcaaaatc agcggcgcgt cgagcggctt cgtcgctacg
    15121 accgagacgt ttgagcgctt cgatggcgat cacctcgcgc tcttgagtta gcacgcccgc
    15181 ggggaagcgg gtgcgatctt gttcggtgag cgcgagggct cgcgccgggt tcgaggcaag
    15241 cgcagcgcga gcgcgctcga ggagctccgc ttcgctctct gccgggcgtg ctgcagcgcc
    15301 gctcgcatgc gctcccgccg acggggacgg cgagctcgcg gccccggacg gctccggagc
    15361 ggcgcccgct ccggtatcgg gtgtaccgct cttgcccgcc gtgtcaccgc tcgcagcggg
    15421 cggcagcgcc tgagccgagg ggggtggcgg cgtctccgac ggtgtccaac gttcgggagc
    15481 gtccggcggg cgctggccgt gcggaccgaa attcagcgcg aacagcaccg ccgaacccac
    15541 gacgacggcc gacacggccg cgactttgcc cgccgtcgag agcttgatgg gtctcgaaga
    15601 cggcggcggc tcgaacacgg gaccaagtct cagtgcgagg ctcgcgagct cggcttcgcc
    15661 cggcaagtcc tctacgcccg cctggaacag gcgacggagc tcatcgggag cgtccgacgt
    15721 ggcgtcgctg aagcgcttcg gctcgttcac ggcatgctcc cgcgttcgcg cgctgccgag
    15781 agcgccgcga gcacacgctc gcgtgcggcg tgcagacgcg aatacgccgt ctgcagcggg
    15841 caaccgatgg cttcggccac ttccttcatc gtgagtccct cgagctcgta gagcacgagc
    15901 accgtgcgct tgtcctcgtc gagcgtggca agcagcgcct gaagttgcgc gcgtgtctcg
    15961 gctcgcacgt cgggctggag ctcaccggcc gccgccaagt gttcggccgg atcggcctgt
    16021 gcgcgctcgt tgcgaacgtg cgcgcggcgg cggtggtcgg cggcgacccg caaacaaatc
    16081 ccgtagagcc aggtcttgag cgaggaacga ccctcgaact cggcgagctt tcggtg
//
LOCUS       DATIML010001337         2742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1149225, whole genome shotgun sequence.
ACCESSION   DATIML010001337 DATIML010000000
VERSION     DATIML010001337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149225"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="VLJ38_23050"
     CDS             complement(<1..302)
                     /locus_tag="VLJ38_23050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42487.1"
                     /translation="MSGDTTTAGMGGETTAAGTGGDMTAAGMSGDAGSAGMGGETTTA
                     GAGGDTGSGGKAMSTGGAGGTTGGASNSAGMGGMLVTSVDPSVTQRGGDSARTAHWV"
     gene            complement(509..>2742)
                     /locus_tag="VLJ38_23055"
     CDS             complement(509..>2742)
                     /locus_tag="VLJ38_23055"
                     /inference="COORDINATES: protein motif:HMM:NF019974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitrate- and nitrite sensing domain-containing
                     protein"
                     /protein_id="HSU42488.1"
                     /translation="MRDKVRSSDFDLYEYLEFHSRTIHSLIAATSALSQLTDDGELML
                     SISRLVAAMQVVEQTSREHALLSFVFAKKEFPPGTFRFFVSLLTEQEVYTSSLRAAAS
                     REDYARFQAVLSGPRAEHALAMRKLALDAADGSLEVDPRAWFELENENMRALRALEDG
                     MAAAVQRAVAKKMLETRQAIRLGVGLAAGVLLISTLLAWAVASSMTRSVGVLYEAANA
                     VQRDRDFGIRAPKTSQDEIGALTDAFNSMLSGIQERDRELQNHRENLEALVEARTREL
                     SKRNDQMRLVLDNVEEGLAMVDGEGKLLEECSRSFAQVFGEAPAGSPFYSVLAADDAV
                     MAETLALGYGQVTDGFLPPDVAAAQMPATLYVHSRQYTLATRPVLSEGKADGALLVVR
                     DVTAQVAAQRADALQREQIRSFQRLTQDRAGFCQFFSEARELVDRIRDARPEDEVETR
                     RALHTLKGNAALYEIRSVSEAAHELEGALVENDTESAKKALALLLRVWGEYAAKIAPL
                     LGEDMGQALEVPRNDFEQALSAVRQRAPHSLIERWFVRWQREPVRLRFARIEEQLQAL
                     ALRLDKPVPEVVINANEVRLPGETFREFWSSFAHVVRNTVDHGVGSVEERLRRGKPAR
                     TRVELSATSNASALVIEIKDDGPGIDWTRLAKRARAAGLPVATRADLIRALTTDGVST
                     ASSVTETSGRGVGMSVVLAACTRLNGKLLIDSEAGQGTRFRFVFPTLDPETPASQSVE
                     QPA"
BASE COUNT          421 a          943 c          893 g          485 t
ORIGIN      
        1 acccaatgcg cggtccgggc cgagtcgccc ccgcgctgcg tgacggatgg atcgacgctc
       61 gtgacgagca tcccgcccat gccggcggag ttgcttgctc ctcctgtcgt cccacccgca
      121 cccccggtgg acatcgcttt gccgcccgaa ccggtgtcgc cgcccgcgcc agcggttgtc
      181 gtctcgccgc ccatgcccgc agagcccgcg tcgccgctca tcccggcggc cgtcatgtcg
      241 ccgcccgtac cggcggctgt cgtctcgcca cccataccag cggtggtcgt gtcgccgctc
      301 atcccggcat gcggcgcgcc gggatggcct gcactgccgc cagttcctcc gctcgtcgga
      361 ctctgcgatt cgcacgcaga ccataacgag aggagtacgg cggcactcag taagctgcgg
      421 ggctttacgg ccgagcgctc cggttgcatc cccgaagagt acccgactac ggtgtttgtg
      481 cctggagctc gctaagctcc cggtcgaact aggccggttg ctcgacggat tggctcgctg
      541 gcgtctccgg atcgagcgtc gggaagacga aacggaaacg ggtgccttgt cccgcctcgc
      601 tgtcgatcag gagcttgccg ttcaaacgcg tgcacgcggc cagcacgacc gacatgccga
      661 cgccccggcc ggacgtctcc gtcacgctgg aggccgtgct caccccgtcc gtcgtcagtg
      721 cgcgaatcag gtccgcgcga gtcgccacgg gcaagcctgc ggcgcgagct cgcttggcga
      781 ggcgagtcca atcgatgccg gggccgtcgt ccttgatctc gatcacgagc gcgctcgcgt
      841 tcgacgtggc gctgagctcg acgcgagtcc gcgccggctt gccgcggcgc aggcgctctt
      901 ccacgctgcc gacgccgtga tcgaccgtat ttcgcacgac gtgcgcgaag ctcgaccaaa
      961 attcccgaaa ggtctcgccg ggtagtcgga cttcgttggc gttgatgacc acctccggca
     1021 ccggcttgtc caagcgaagc gcgagggctt ggagttgctc ctcgatacgc gcgaagcgga
     1081 gccgaacagg ttcgcgctgc cagcgcacga accagcgctc gatcagcgaa tgcggtgctc
     1141 gctgccgcac ggccgagagc gcctgctcga aatcgttccg gggcacctcg agcgcttggc
     1201 ccatgtcctc accgagcaat ggcgcgatct tggcggcgta ttcgccccag acgcggagca
     1261 gcagcgcgag cgcttttttt gcggattccg tgtcgttctc gacgagcgca ccctcgagct
     1321 cgtgagcggc ctcggacacc gaccggatct cgtacagggc ggcgttccct ttcagggtgt
     1381 gcagggcgcg cctggtctcg acctcgtcct cgggccttgc gtctcgaata cggtcgacga
     1441 gctcacgcgc ttcgctgaag aattgacaga acccagcgcg atcctgcgtc aagcgctgga
     1501 agctcctgat ttgctcacgt tggagcgcat ccgcgcgctg cgccgcgacc tgggcggtga
     1561 catctcgcac gacgaggagc gctccgtcgg ccttgccctc gctgagcacg ggtcgggtcg
     1621 cgagcgtgta ctggcggctg tggacgtaga gcgtcgctgg catttgagcg gccgcgacgt
     1681 ccggcggtaa gaatccgtcc gtcacttgtc cgtaaccaag cgcgagcgtc tcggccatga
     1741 ccgcatcgtc cgccgcgagt acggagtaga acggggagcc ggccggtgcc tcaccgaaca
     1801 cctgggcgaa gcttcgcgag cactcctcga gcagcttgcc ctcgccgtcc accatcgcga
     1861 gtccctcctc cacgttgtcg agcactagcc gcatctggtc gttacgcttc gacagttccc
     1921 gggttctcgc ctcgacgagg gcctcgaggt tttcgcggtg gttctggagc tctcgatcgc
     1981 gctcctgaat ccccgagagc atggaattga aggcgtcggt cagggctccg atctcgtcct
     2041 gactcgtctt gggagcgcgt attccgaagt cgcgatcgcg ctggacggcg ttggcggcct
     2101 cgtagagcac cccgacgctg cgggtcatgc tgctcgcgac cgcccaggcg agcagcgtcg
     2161 aaatcaagag caccccggcg gcgaggccga caccgagccg gatggcctgg cgcgtctcga
     2221 gcatcttctt ggcgaccgca cgctggaccg ccgcggccat gccgtcttcg agcgcgcgca
     2281 gcgcccgcat gttctcattc tcgagctcga accacgcccg cgggtcgacc tcgagtgagc
     2341 cgtcggcggc gtcgagcgcg agcttgcgca tggcaagcgc gtgttcggcg cgcgggccgc
     2401 tgaggacggc ttggaagcgc gcgtagtcct cgcggctcgc ggccgcgcgc aacgacgacg
     2461 tgtacacctc ctgctcggtt agaagactca cgaaaaagcg gaaagtcccc ggcggaaact
     2521 ccttcttggc gaagacgaag ctcaggagcg catgttcgcg actggtttgc tcgaccacct
     2581 gcatggccgc gacgagccgc gaaatactca acatgagctc gccgtcgtcg gtgagctggc
     2641 tcagggcgct cgtcgcggca atcagtgaat ggatcgtgcg actgtggaat tccaggtact
     2701 cgtaaaggtc gaagtccgag gagcgcacct tatcccgcat ct
//
LOCUS       DATIML010001338         3816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2020989, whole genome shotgun sequence.
ACCESSION   DATIML010001338 DATIML010000000
VERSION     DATIML010001338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3816
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2020989"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1434)
                     /locus_tag="VLJ38_23060"
     CDS             complement(<1..1434)
                     /locus_tag="VLJ38_23060"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSU42489.1"
                     /translation="MESSFDTLSLPFVEQLYTDFLRDPGSVPPDWREYFGGLSQDSDF
                     SRRPALGPSFTPAGVFGNQRANGHAKPNGYANGNGATALAASGVPEVAVRQDAVDALI
                     RAYRVRGHMIARIDPLGLPRPNWPELDPAFYGLRSEDLDRKFSSRTIFGAETLTLREM
                     LRRLRNTYCRSIGVQFMHIDDLTVKNWLQDRMEGSENRVELSREEQLRIFTKLTDATI
                     FEEFIQKKFVGAKSFSLEGSESLIPLLAFLIDRADDPHEMDEVILGMAHRGRLNVLAN
                     IMGKSPREIFREFQDADPELYFGSGDVKYHLGHSSDFTTASGRKVHLSLCFNPSHLEF
                     VDPVVLGRTRGKQDRASDLTRGKKLAVMIHGDAAFAGEGIIQETLNLSQLDAYTVGGA
                     IHIIINNQIGFTTPPSQGRSTTYATDVAKMLQIPIFHVNGEDPEAVAQVVRLAMDFRD
                     TFLRDVVIDMYGYRRHGHNETDEPAFTQ"
     gene            complement(1583..2965)
                     /locus_tag="VLJ38_23065"
     CDS             complement(1583..2965)
                     /locus_tag="VLJ38_23065"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSU42490.1"
                     /translation="MKPSVLIVDDEQVFRVLAETALTAEGFEVRSAINIARAKKEIDR
                     AVPDVVLLDRRLPDGDGMALLREIRAEGQSAPLFILVTAYADIANAVEALRAGAVDYL
                     AKPVQPTDLLLKVKKALEVRGLRDRLELSQRLVTPQNLEPKSQAMRAFTRTLEQLAKS
                     PFTPVLITGPSGAGKQYAAEALHRYTYPPTGSDSSFVDVNCAAIPADLIEGTLFGWER
                     GAFTDARSSRRGLIELADKGTLFLDEIAELPDHSQAKLLKFLDAQRFRRLGGERELEV
                     SVRVIAATNRDVDAFVKSGKFREDLYHRLSVFVLRVPPLAERHEEIPDLAQLFVEQCA
                     RRMKKRTVGLSADALAKLNRYDFPGNVRELKNIIERAVILSADARIEPEDIVLPPAAR
                     TEIPSNVFFGVSLNPEGAPPPVDQVERAYVQRVLEHMNGRRGAAAEVLGISYPTFLRR
                     LRELGIDRDN"
     gene            complement(3025..>3816)
                     /locus_tag="VLJ38_23070"
     CDS             complement(3025..>3816)
                     /locus_tag="VLJ38_23070"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSU42491.1"
                     /translation="VLTRYEAFPIVASAIVLALVVLLRRSLATFRDSEERAVREERLQ
                     RVGEAANLIAHEVKNSLNGIRMGTEIACDQGAPGREQALHELRGEISRLANFTAELMT
                     FSKGIVPRKVRVDLTEFVPKVTSLLEKSAKDVGIELEFVLPNAPLEADVDPQLLHIVI
                     SNLVTNAIEALAASSDERPHIDVRLERDAAHGEGVRLEVSDNGPGLSHDIVDQLFEPF
                     HSGKPSGVGIGLALSQRIARAHGGKLALEPSIKGAVFALTLPRTS"
BASE COUNT          624 a         1206 c         1317 g          669 t
ORIGIN      
        1 ctgcgtgaag gcgggctcgt cggtctcgtt gtgaccgtgc cggcgatagc cgtacatgtc
       61 gatcacgacg tcgcgcagga acgtgtcacg gaagtccatc gcgaggcgca cgacctgcgc
      121 gaccgcctcg gggtcctccc cgttgacgtg gaaaatcggg atttgcagca tcttcgcgac
      181 gtcggtcgcg taagtggtcg agcgtccctg ggacggcggc gtcgtgaaac cgatctggtt
      241 gttgatgatg atgtgaatcg cgccgcccac cgtgtaggcg tcgagctggc tcaggttcag
      301 ggtctcctgg atgatgccct cgcccgcgaa ggcggcgtcg ccgtggatca tgacggcgag
      361 ctttttgccg cgcgtgagat cgctcgcacg gtcttgtttg ccgcgcgtcc ggccgagcac
      421 gacgggatcg acgaactcga ggtggctcgg gttgaaacag agcgagaggt gcaccttgcg
      481 gccgctcgcc gtcgtgaaat ccgagctatg gccgaggtgg tacttcacgt cgccgctacc
      541 gaaatagagc tcgggatcgg cgtcctggaa ctcgcggaag atttcgcgcg ggctcttgcc
      601 catgatgttg gcgagcacgt tgaggcggcc gcggtgcgcc atgccgagga tgacctcatc
      661 catctcgtgc gggtcgtccg cgcgatcgat caagaacgcg agcagcggga tgaggctctc
      721 cgagccctcg agcgagaagc tcttcgcgcc gacgaacttc ttctggatga actcctcgaa
      781 gatggtcgcg tccgtgagct tcgtgaagat gcggagctgc tcttcgcgcg agagctcgac
      841 gcggttctcg ctgccctcca tgcgatcctg cagccagttt ttgaccgtca agtcgtcgat
      901 gtgcatgaac tgcacgccga tcgaacggca ataggtgttg cgcaggcgcc ggagcatctc
      961 ccgcagcgtg agcgtctccg cgccgaagat ggtgcggctc gagaatttgc gatcgaggtc
     1021 ctcggagcgc agcccgtaga acgcggggtc gagctccggc cagttcgggc gcggcaaccc
     1081 gagcggatcg atgcgcgcga tcatgtggcc gcgcacacgg tacgcgcgga tgagcgcatc
     1141 gacggcgtct tggcgcacgg cgacttccgg cacgccgctc gcagcgaggg ccgtcgcacc
     1201 gttgccgttc gcgtaaccgt tcggcttcgc gtggccgttc gcgcgctggt tgccgaacac
     1261 acccgcgggt gtgaaggacg ggccgagcgc cggacggcgc gaaaaatcgc tgtcctgaga
     1321 gaggcccccg aagtactcgc gccagtccgg aggcacgctg cccggatcgc gcaaaaagtc
     1381 ggtgtagagc tgctcgacga acgggagact cagcgtatcg aaagagcttt ccatggcttt
     1441 tggatcgact cgcggccagg cgttctggac cccgtaagtg ccgcggtcaa ggtgcggcgg
     1501 gcgtggaccg aaaatcgagc cattcgaggc tgctagcgcg atacgcggcg tgccacccgg
     1561 acgcaatttt atgcggaaaa gctcagttgt cgcggtcgat gccgagctcg cgcaagcggc
     1621 gtagaaacgt tggatacgag ataccgagca cctcggccgc cgcgccgcgc cgtccattca
     1681 tgtgctcgag cacgcgctgc acgtaggcgc gctcgacttg atccacgggc ggcggggcgc
     1741 cctccggatt gagtgatacg ccgaagaaga cgttggacgg gatctcggtg cgcgcggccg
     1801 gcggcagcac gatgtcctcc ggctcgatgc gcgcgtcggc gctcaggatg acggcgcgtt
     1861 cgatgatgtt cttgagctcg cgcacgttgc ctggaaaatc gtagcgattg agcttggcga
     1921 gcgcgtcggc cgagagcccc accgtgcgct tcttcatgcg ccgcgcgcac tgctcgacga
     1981 agagctgcgc cagatccggg atctcttcgt gacgttcggc gagcggcggc acgcgcagca
     2041 cgaacacgct gagccggtga tacaggtcct cgcgaaactt gccgcttttg acgaaggcgt
     2101 cgacgtcgcg attggtggcg gcgatcacgc gcacggacac ttcgagctcg cgctcgccgc
     2161 cgaggcgccg gaagcgctgc gcgtcgagga acttcaagag cttggcctgc gagtgatcgg
     2221 gcagctccgc gatttcgtcg aggaagagcg tgcctttgtc ggccagctca atcaggccgc
     2281 ggcgcgagct acgggcatcg gtgaacgcgc cgcgctccca gccgaacaac gtgccctcga
     2341 tcaggtcggc ggggatcgcc gcgcagttca cgtcgacgaa cgacgaatcg gagcccgtcg
     2401 gcggatacgt gtagcgatgc agggcttcgg cggcgtactg cttgccggcg cccgacggcc
     2461 ccgtgatcaa cacgggcgtg aacgggctct tcgcgagttg ctcgagcgtg cgcgtgaagg
     2521 cccgcatcgc ctggctcttc ggctcgaggt tttgcggcgt gaccaggcgc tgcgacagct
     2581 cgaggcggtc gcgcagaccg cgcacctcga gcgccttctt gaccttgagc aagagatccg
     2641 tcggctgcac gggcttcgcg agataatcga ccgcgccggc gcgcagcgcc tcgaccgcgt
     2701 tcgcgatgtc ggcgtacgcc gtgacgagaa tgaacagcgg cgccgactga ccctcggccc
     2761 ggatttcccg caagagcgcc atgccgtcgc cgtccggcag gcggcggtcg aggagcacga
     2821 cgtcaggcac ggcgcggtcg atctctttct tggcgcgcgc gatgttgatc gccgaacgaa
     2881 cctcgaaccc ttccgccgtg agcgcggtct ccgcgagcac gcggaacacc tgttcgtcgt
     2941 cgacgatgag aacgctgggt ttcactggct taaggtccta gcaccgctgt cagaggcatg
     3001 gtgtccgtgc tggttttgct gggatcagct cgtacgcggt agcgtgagcg cgaagaccgc
     3061 gcccttgatg gacggttcga gcgcgagctt gccgccgtgc gcgcgcgcga tgcgttgcga
     3121 tagcgcaagt ccgatgccga cgccgctcgg cttgccggaa tggaacggct cgaacagctg
     3181 gtccacgata tcgtggctga gtccgggccc gttgtcggac acctcgaggc gtacgccctc
     3241 gccgtgcgcg gcgtcgcgct cgagccgcac gtcgatgtgc ggccgctcgt cggagctggc
     3301 tgcgagcgcc tcgatggcgt tggtgacgag gttggaaatc acgatgtgca atagttgcgg
     3361 gtcgacgtcc gcctcgagcg gcgcgttcgg cagcacgaac tcgagctcga tgccgacgtc
     3421 cttggccgac ttctcgagca acgacgtgac cttcggcacg aactccgtga gatcgacgcg
     3481 caccttgcgc ggcacgatac ccttcgaaaa cgtcatgagc tcggccgtga agttggcgag
     3541 ccgagaaatc tcgccgcgga gctcgtgcag cgcctgctcg cgcccgggcg cgccctgatc
     3601 gcaggcgatt tccgtcccca tgcggatgcc gttcagcgag tttttcactt cgtgcgcgat
     3661 gaggttcgcg gcttcgccca cgcgctgcag gcgctcctcg cgcacggcgc gttcctccga
     3721 atcgcggaac gtcgcgagcg agcgccggag cagcacgacc agcgcgagca cgatcgctga
     3781 cgcgacgatc ggaaacgcct cgtagcgcgt cagcac
//
LOCUS       DATIML010001339         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2593621, whole genome shotgun sequence.
ACCESSION   DATIML010001339 DATIML010000000
VERSION     DATIML010001339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2593621"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1567
                     /gene="lptD"
                     /locus_tag="VLJ38_23075"
     CDS             <1..>1567
                     /gene="lptD"
                     /locus_tag="VLJ38_23075"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HSU42492.1"
                     /translation="DKDFQYEVNGNARLCGNVEMRQGDRRIRADCLEYDAAKQSAKLE
                     GGIVYTDPQLTVRGGDGTYSPTIGAEFEGAEFELPERNARGTARSMKMDANGKITLEG
                     VSFSTCPAKDRSWEMKANRIELDTQARTGSGQGAKVEFKGVPIFYAPWLTFPIGPDRK
                     SGFLFPNIGRSTRSGFELEVPYYWNIRPNADFTATPIYYSKRGIDLAGDFRFLTDRQR
                     GTFSFDYLPSDDVAHRDRSKLELKHVAELPGEWRFRIDATHVSDSDYFEDFALGPEGT
                     SVPFAERLAEVTYRDEHLNVRAQFQQFQTIDDELPDDERPYARTPRVLASGDWESGLG
                     AINYGFDSEVVNFERDLGVTGWRADLAPRFGADWSAPGFFVRPSAGYRYTQYSLRDVA
                     PGTDDSPTRSLPFASLDAGLVFERPSGSHGQRRLTLEPRALYLYTPYRAQDDLPLFDT
                     GLPDLNLVELYRTNRYVGADRVNDANQISFGLTSRLFDSASGAQYLAMSVGQAYYFVK
                     PRVVLPGEPPATRD"
BASE COUNT          260 a          560 c          505 g          242 t
ORIGIN      
        1 cgacaaggac ttccagtacg aggtcaatgg caacgcgcgg ctctgcggca acgtcgagat
       61 gcgccagggc gaccggcgca tccgcgcgga ctgcctcgaa tacgacgcgg cgaaacagag
      121 cgcgaagctc gagggtggca tcgtctacac cgatccccag ctcacggtgc gcggcggcga
      181 cggcacttac tccccgacga tcggcgccga gttcgaaggc gccgagttcg agctgcccga
      241 acgcaacgcg cgcggcacgg cgcgctcgat gaagatggat gcgaacggca agatcacgct
      301 cgagggcgtg tcgttcagca cctgcccggc gaaggaccgg tcctgggaga tgaaggcgaa
      361 ccgcatcgag ctcgacacgc aggcgcgcac cggcagcggg cagggtgcca aggtcgaatt
      421 caagggcgtg ccgatcttct acgcgccctg gctcacgttt ccgatcggcc cggatcgcaa
      481 gagcggcttc ctgttcccga acatcggccg ctccacgcgc tcgggcttcg agctcgaggt
      541 gccttactac tggaacatcc ggccgaacgc cgacttcacc gcgacgccca tctactactc
      601 caagcgcggc atcgatctcg cgggcgactt ccgtttcctc accgaccgtc agcgcggcac
      661 gttcagcttc gactacctgc cgagcgacga cgtcgcgcat cgcgaccgct cgaagctcga
      721 gctcaagcac gtcgcggagc tgccgggcga atggcgtttc cgcatcgacg ccacgcacgt
      781 cagcgacagc gactacttcg aggatttcgc gctcggcccc gagggcacca gcgtgccatt
      841 cgctgagcgc ctcgcggagg tcacctatcg cgacgagcac ctgaacgtgc gcgcgcagtt
      901 ccagcaattc cagacgatcg acgacgagtt gcccgatgac gagcggccgt acgcgcgcac
      961 accgcgcgta cttgcgtcgg gcgactggga gtccggcctc ggcgcgatca actacggctt
     1021 cgattccgag gtggtgaact tcgagcgcga cctcggcgtc acgggctggc gcgcggatct
     1081 cgcgccgcgc ttcggcgccg actggtccgc gccggggttc ttcgtgcgtc cgtccgctgg
     1141 ctaccgctac acgcagtatt cgctgcggga cgtcgcgccc ggcaccgacg actcgccgac
     1201 ccgctcgctg ccgttcgcct cgctcgacgc gggcctcgtg ttcgagcgcc cgtcgggctc
     1261 gcatggacag cggcgcctga cgctcgagcc acgcgcgttg tatctctaca cgccgtaccg
     1321 agcgcaggac gacctgccac tgttcgacac gggcctcccg gacctgaacc tcgtcgagct
     1381 gtatcgcacg aaccgctacg tgggcgcgga ccgcgtgaac gacgcgaacc agatctcgtt
     1441 cggcctcacg agccgcctgt tcgattccgc gagcggcgcg cagtacctcg ccatgagcgt
     1501 cggccaggcc tattacttcg tgaagccgcg cgtcgtgctg cccggcgagc cgccggcgac
     1561 ccgcgat
//
LOCUS       DATIML010001340         2289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_5196334, whole genome shotgun sequence.
ACCESSION   DATIML010001340 DATIML010000000
VERSION     DATIML010001340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5196334"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2289
                     /locus_tag="VLJ38_23080"
     CDS             <1..>2289
                     /locus_tag="VLJ38_23080"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HSU42493.1"
                     /translation="LSGSERAFFEPRLGTDLAGVRIHDDARAAAAAREIDAQAFTRGR
                     DVYFAAGRYQPHTDAGRWLLAHELAHTVQQTGGARRKLNELVQRAPAEPAAKTKATNK
                     TDTPAPPPAVDASKPRLGPKIANSEQALYIPVLHIPKFKAERYPTNRTYYRSHKFSRK
                     GENDAAQVSRWNQAMGTDAGTIAALKPLVKDRHTYIVTGTQGLRAVIADNIVDLAARL
                     RRPFWDKPGSGEMTHDVDHVIELQIGGWPDAPNREFLATPATNLELLESKANSASGSV
                     IAKQVDQAVASALRTKQVLDALPQKHRNAEAVFDNYDVVFEKIDALEGASKPSRWPFA
                     DVFAGKHVATLELDSAHVGLFDLSDPNPEKPLKKHGWTREELIGSSKVTVIYVAGLMR
                     VPIRWNPKDQKRQLTAGEILALGFPLGAQIEMDVGSKGGADLNQPLGVLTPDELWHYP
                     RTKIGVTPAIGERKQFGIRRLEHTVHAWAMRVPGLANAQGNFGPLSPVEFGALDFDGK
                     QLYLPGRIKPSLSLLEKLPVSLVFRGNSVALETTFGAEDLNVPRPFSVPRARVTLGVN
                     QDLAFYADGRVEFGIERVGAGSLRAKGSTKGGFELDGDFAFDKKLADSSLRFWYKKNV
                     WGASGTLTIPPKRIPGVKHATLAVSYTEGKLTADGDAELEVPLFKRAALHLEYSEKDG
                     LVLGGLFELKSDLSIVKSGTLAAEVRRSPDGEWALSGSGLVLVEIAGHRAELKGAYDR
                     GVLDVSARVPFKWKRIEGEVTLG"
BASE COUNT          431 a          786 c          739 g          333 t
ORIGIN      
        1 ctgtccggct cggagcgcgc gttcttcgag ccgcggctcg gtacggatct cgcgggggtg
       61 cggatccacg acgacgcgcg cgccgccgca gccgcgcgcg agatcgacgc gcaggcgttc
      121 acgcgcgggc gcgacgtgta cttcgccgcc ggacgatacc agccgcacac cgacgccggg
      181 cgctggctcc tcgcacacga gctcgctcac accgtccaac agacgggtgg agcccggcgc
      241 aagctgaacg agctcgtcca gcgcgcgccc gccgagcccg cggccaaaac caaagccacg
      301 aacaagaccg acaccccggc gccgccgcct gcggtcgacg cgagcaagcc tcgcctcgga
      361 cccaaaatcg caaactcgga gcaagcactc tacatccccg tgctccacat ccccaagttc
      421 aaggcggagc gctacccgac caatcgcacc tactatcgct cccacaagtt cagtcgcaag
      481 ggtgagaacg acgcggcgca ggtctcgcgc tggaaccagg cgatgggcac cgacgccggc
      541 acgatcgcgg cgctcaagcc gctcgtcaag gatcgacaca cgtacatcgt gacgggcacg
      601 cagggcctgc gcgccgtcat cgcggacaac atcgtcgatc tcgccgcgcg cctgcggcgg
      661 ccgttttggg acaagcccgg gagcggcgag atgacgcacg acgtcgacca cgtcatcgag
      721 ctccagatcg gcggttggcc cgacgccccc aatcgggagt tcttggcgac gcccgccacg
      781 aacctcgagc tgctcgaaag caaggcgaac tccgcctcgg gctccgtgat cgcaaagcag
      841 gtggaccagg cggtcgcgag cgcgctccga accaagcaag tcttggatgc gctgccgcaa
      901 aagcatcgga acgccgaggc cgtcttcgac aactacgacg tggtattcga gaagatcgac
      961 gcgcttgagg gagcgagcaa gccgtcgcgc tggccgtttg cggacgtatt cgccggcaag
     1021 cacgtcgcga ccctcgagct cgattcggcc cacgtcggcc tgttcgatct gagcgacccg
     1081 aaccccgaga agccgttgaa gaagcacggc tggacgcggg aggagctgat cggctcctcg
     1141 aaggtcacgg tgatttacgt cgccggcttg atgcgagtcc cgattcggtg gaatccgaaa
     1201 gaccaaaagc gtcaactcac ggctggagag atcctcgcgc tcggcttccc gctcggcgcc
     1261 cagatcgaaa tggacgtggg ctcgaaaggc ggcgccgacc tgaaccaacc tctcggcgtg
     1321 ctcacgcccg acgaactctg gcattacccg cgcaccaaaa tcggcgtgac gccggccatc
     1381 ggcgagcgca agcagttcgg cattcggcga ctcgagcaca cggtgcacgc ctgggccatg
     1441 cgcgtaccgg gtctcgccaa cgcgcagggc aatttcggcc cgctcagccc ggtcgagttc
     1501 ggcgcgctcg atttcgacgg caagcagctc tatctacccg gccggatcaa accgagcctc
     1561 agcctgctcg agaagctgcc ggtgagcctc gtctttcgcg gcaactcggt agcgctcgaa
     1621 accacgttcg gcgccgagga cttgaacgtt ccgagaccat tcagcgtgcc acgcgcccgc
     1681 gtcacgctcg gcgtgaatca agacctcgcc ttctatgccg acggccgggt cgagttcggc
     1741 atcgaacgcg tgggcgccgg gagcttgcgc gcgaagggca gcacgaaggg cggcttcgag
     1801 ctggacggcg atttcgcctt cgacaagaag cttgccgaca gctcgcttcg cttttggtac
     1861 aaaaagaacg tctggggcgc gtcgggcacg ttgacgatcc cgcccaagcg cattcccggc
     1921 gtgaagcacg cgacgcttgc cgtgagttac acggagggca agctcacggc ggacggcgac
     1981 gccgagctcg aggtgccgct cttcaaacgc gccgcgctgc acctcgagta ttcggagaag
     2041 gacgggctcg tgctcggcgg cctgttcgag ctcaagagcg acctttcgat cgtcaagagc
     2101 ggcacgctcg cggccgaggt gcggcgttca cccgacggcg aatgggcgct ctccggcagc
     2161 ggactcgtcc tcgtcgaaat cgcgggacat cgcgcggagc tcaagggcgc ttacgaccgc
     2221 ggcgttctcg acgtgagcgc gcgcgttccc ttcaaatgga agcgcatcga gggcgaagtg
     2281 acgctcggc
//
LOCUS       DATIML010001341         1838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1149994, whole genome shotgun sequence.
ACCESSION   DATIML010001341 DATIML010000000
VERSION     DATIML010001341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149994"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1361)
                     /locus_tag="VLJ38_23085"
     CDS             complement(<1..1361)
                     /locus_tag="VLJ38_23085"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HSU42494.1"
                     /translation="MATALFPVGAPDVLYIVDLSSYVLRAYHAIAPLQSPSGEPTQAV
                     HGTVTMLERLVRERKPVLFAVAMDSGRDTFRRDIYPEYKAHRPPAPADLASQFQRCED
                     IVRAFSMACLKQDRVEADDLIATAVRHGREQSLRTVIVASDKDLMQLVGDDVLMWDTM
                     RDRVIGPAEVVERFGVEVAQVADLLALMGDTSDNIPGVPHVGPKTARELLNAYGSLQG
                     IYDNLAQIKRKGLRDNLEAHREQAFLSRQLVALKDDCDVNLDPERLTWSGRDYATLKR
                     IYADLGLTRQAAQLEADEATRVASGTNATGGANATGGANATSGLKTMGAGATPASSAQ
                     SGAPAVTVAAAPGEYRVVTELAELNRLLDEARAAGRVALELAVEPPSSLRGDLIGVGV
                     AIAPGRGAYVPLAHRYVGAPKQLAQAEVLAALAPLLADERIAKIALDLKRVGVTTSRL
                     GAPL"
     gene            1633..>1838
                     /locus_tag="VLJ38_23090"
     CDS             1633..>1838
                     /locus_tag="VLJ38_23090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012233463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42495.1"
                     /translation="MGESSGPTAQMPSALVAGKYRLTSLLGRGGMGSVWAGVHTTLGT
                     KVAVKFIDAEHVDSAEARHRFENEA"
BASE COUNT          292 a          601 c          650 g          295 t
ORIGIN      
        1 agcggcgcgc cgaggcgcga ggtcgtcacg ccgacgcgct tcaaatcgag cgctatcttc
       61 gcgatccgtt cgtcggcgag cagcggcgcg agcgcggcga gcacctcggc ttgcgcgagc
      121 tgtttcgggg cgccgacgta acgatgggcg aggggaacgt acgcgccacg tcccggcgca
      181 atggcgactc ccacgccgat gaggtcgccc cggagcgacg acggaggctc cacggcgagc
      241 tcgagcgcca cgcgcccggc ggcgcgcgcc tcgtcgagca ggcgattgag ctccgcgagc
      301 tcggtgacga cgcggtactc gccgggcgcc gccgcgacgg tgaccgcggg ggcgccgctc
      361 tgcgcgctgg acgctggcgt cgcgccggcg cccattgttt tcaggccgct cgtcgcgttc
      421 gcgccgcccg tcgcgttcgc gccgcccgtc gcgttcgtac cggaggcgac gcgagtggcc
      481 tcgtccgctt cgagctgtgc cgcttggcgc gtgaggccga ggtcggcgta aatccgcttg
      541 agcgtcgcgt agtcgcgccc ggaccacgtg agtcgctcgg ggtcgaggtt cacgtcgcaa
      601 tcgtccttga gcgcgacgag ctgacggctc aaaaacgcct gctcgcgatg cgcctccagg
      661 ttgtcgcgca agcccttgcg cttaatctgc gcgaggttgt cgtaaatgcc ctggagcgag
      721 ccgtaggcgt tcaagagctc gcgcgcggtt ttggggccga cgtgcggcac accgggaatg
      781 ttgtccgagg tgtcccccat gagcgcgagc aagtccgcca cctgcgccac ctcgacgccg
      841 aagcgctcca cgacctcggc cgggccgatc acccgatcgc gcatggtgtc ccacatgagc
      901 acgtcgtcac cgacgagctg catcagatcc ttgtcggagg cgacgatgac cgttcgtagc
      961 gactgctccc ggccatgccg aacggccgtg gcgatgaggt catcggcttc gacccggtcc
     1021 tgcttgaggc aagccatcga gaacgctcgc acgatgtcct cgcagcgctg gaattgggag
     1081 gcgaggtcgg ccggcgccgg cgggcggtgc gctttgtact cagggtagat atcgcgccga
     1141 aacgtatcgc gcccagaatc catcgcgacg gcgaagagca ccggcttgcg ctcgcgcacg
     1201 agccgctcga gcatcgtgac ggtgccgtga acggcctgcg tcggctcgcc tgacgggctc
     1261 tgcagtggcg cgatcgcgtg atacgcccgc agcacgtagc tcgacagatc gacgatgtag
     1321 agcacgtcgg gtgcgccgac tggaaagagg gcggtcgcca tcgggctccc tcgttaccac
     1381 cgcgagcgct cgcgtccgcc cgaaacgcga gcttcgcgaa gaacatgagt aaaagtgcgc
     1441 aatttcgagc cgacgcacgc aaccacccgc gggaaaaagt tgagtctgcg gtgcgtgcgc
     1501 tctgtgagga aacgtggccg aagccgttat cgttcggaga tccggggtgt tcgctcggga
     1561 ccccgggcgg cgacgctcga gtcgagcggc tagcgttaag gaacgaggca agttaccttc
     1621 gtgcgagtgt ccgtgggtga gtccagtggt ccgacggctc agatgccgtc tgccctcgtg
     1681 gccggcaaat accggctgac gagcttgctc ggtcgcggag gtatgggctc ggtctgggcg
     1741 ggcgtgcaca cgaccctggg caccaaggtt gcggtcaagt tcatcgacgc cgagcacgtc
     1801 gacagcgcgg aggcgcgcca tcgtttcgaa aacgaagc
//
LOCUS       DATIML010001342         3149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4614441, whole genome shotgun sequence.
ACCESSION   DATIML010001342 DATIML010000000
VERSION     DATIML010001342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4614441"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1088
                     /locus_tag="VLJ38_23095"
     CDS             <1..1088
                     /locus_tag="VLJ38_23095"
                     /inference="COORDINATES: protein motif:HMM:NF039970.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6055 domain-containing protein"
                     /protein_id="HSU42496.1"
                     /translation="ASPKSNDPFTNIATTRGWSTDELNDFFGEWALHNVSWDYVDPAP
                     TVTDDPADPGAAFRATYKAITDQSKPERRLRLTALEPLDDDTANNRRFVTPYLWAPER
                     WGYNVVRLYPDAGAASVKVTFRGVVQAEAHPDFRWALVATDSAITKSRYSALQRGTDG
                     ELSFCINAGEPLFLVVMATPSEQQHIVWDQAYPTIYRYPYMVALEGAWPAGFQGGRQD
                     ACATGSRWANGGGCVVGSPPSSVYVGPYAQILGGTVSGNARIEDHAVITAGTVSAGTV
                     GGLSILMNGFSVTGGEARASFYPLGFFEGGQSISGGALLYGDIEFRGQGYARTSGTCS
                     GFVDSSTCVPGGTSVNDVTVAGPYSWR"
     gene            1145..2164
                     /locus_tag="VLJ38_23100"
     CDS             1145..2164
                     /locus_tag="VLJ38_23100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012236014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HSU42497.1"
                     /translation="MSDLVLETLPLGFPWVCADPFLFCVHHLDRYPQGNAELGPDASL
                     AGRQLGQDFEGKVGWRMYHGDVVPGFPQHPHRGFETVTIVRRGLIDHSDSLGATARFG
                     SGDVQWLTAGAGIVHSEMFPLVERERENPLELFQIWLNLPPESKFVAPHFTMLWNRDI
                     PHVHATDAQGRAVDVTVVAGTLDGKRPPAPPPSSWASQPNTDVAIWCVRLAAGATWTL
                     PPASDDGVVRTLYFFKGPGVRIGGRNFSSPVAARVRADVPVELEAADGECELLMLQGR
                     PIAKPVVQHGPFVMNTREEIQNAVRDYQRTRFGGWPWPSDGPVHARAEGRFAKHANGL
                     IERVE"
     gene            2373..>3149
                     /locus_tag="VLJ38_23105"
     CDS             2373..>3149
                     /locus_tag="VLJ38_23105"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HSU42498.1"
                     /translation="MTAILIFFFGHWLSSVFFQTFYLHRYGAHRQFELSRGWERTFHF
                     LTYLTQGASYLHPRGYAILHRMHHAYSDTERDPHSPVFEPNIFKMMWETKHRYDDFAY
                     HRVEPEARFAAATPDWPFIDKLSQSWPMRIVWLAFYTGFYVVFAPSPWFYLLLPAHYI
                     MGPIHGAIVNYCGHRFGYRNFASADVSRNTLIFDFVTLGELFQNNHHEFAMSPNFAVR
                     RFEVDPAYLVMRVFAALGIIKNLSPQRGRYPHVPHAPSLRT"
BASE COUNT          512 a         1076 c         1024 g          537 t
ORIGIN      
        1 cggcgagccc gaagagcaac gacccgttca cgaacatcgc gacgacgcgc ggctggtcca
       61 cggacgagct caacgatttt ttcggcgagt gggcgctgca caacgtgagc tgggactacg
      121 tcgatccggc gccgacggtg acggacgacc ccgcggatcc gggcgccgcg tttcgcgcga
      181 cgtacaaggc gatcaccgat cagtcgaagc ccgagcggcg actgcggctc acggcgctcg
      241 agccgctcga cgacgacacc gcgaacaacc gacgcttcgt gaccccatat ttatgggcgc
      301 ccgaacgctg ggggtacaac gtcgtacggc tctatccgga cgccggcgcg gcgagcgtca
      361 aagtgacgtt ccgcggcgtc gtgcaagccg aagcgcaccc tgactttcgc tgggcgctcg
      421 tggcgacgga cagcgcgatc accaagtcgc gctacagcgc gctccagcgt gggacggacg
      481 gcgagctctc gttctgcatc aacgccgggg aaccgctgtt cctcgtcgtg atggcgacgc
      541 cgagcgaaca gcagcacatc gtgtgggacc aggcgtaccc gacgatctac cgctatccgt
      601 acatggtcgc gctcgagggc gcgtggccgg cggggtttca gggcggcagg caggacgcct
      661 gcgccacggg ctcgcgctgg gcgaacggcg gcggctgcgt ggtcggcagc cctccctcga
      721 gtgtctacgt cggcccgtac gcgcaaatcc tcggcggcac ggtgagcggc aacgcgcgca
      781 tcgaggatca tgcggtcatc acggcgggca ccgtttcggc gggaacggtg ggcggcttga
      841 gcatcctcat gaacggcttc agcgtcacgg gcggcgaggc gcgggcgagc ttctacccac
      901 tcggtttctt cgagggcggg cagagcatct ccggcggggc gctgctgtac ggcgacatcg
      961 agttcagagg tcagggttac gcgcgaacga gcggcacctg ctcgggattc gtcgatagct
     1021 cgacgtgcgt cccaggcggg accagcgtga atgacgtgac cgttgcgggt ccgtacagct
     1081 ggcgctgaac gcgtggcgcc cccggattgc gacacctaca agccgtggtt actgtcaccc
     1141 taccgtgagc gatctcgtcc tcgaaacact gccgctcggc ttcccctggg tttgcgccga
     1201 tccgttcctc ttctgcgtgc accacctcga ccgctacccg cagggtaacg ccgagctcgg
     1261 accagacgcc tcgctcgcgg ggcgccagct cgggcaggac ttcgagggca aagtcggctg
     1321 gcggatgtat cacggcgacg tcgtgcccgg ctttccgcag catccccacc gcgggttcga
     1381 gaccgtgacg atcgtgcggc gcgggctcat cgatcattcg gattcactcg gcgcgacggc
     1441 gcgtttcggc tcgggcgacg tgcagtggct cacggccggc gccggcatcg tgcactccga
     1501 gatgttcccg ctcgtcgagc gcgagcgcga aaacccgctc gagctctttc agatttggct
     1561 gaacctgccg cccgagagca agttcgtcgc gccccatttc acgatgctgt ggaaccgcga
     1621 cattccgcac gtgcacgcga ccgacgcgca aggtcgtgcc gtggacgtga cggtcgtcgc
     1681 cggaacgctc gacggcaaac gcccgcctgc gcccccgccg agctcgtggg cgtcgcagcc
     1741 gaacacggat gttgcgattt ggtgcgtgcg actcgctgcg ggtgccactt ggacgttacc
     1801 gcccgcgtcc gacgacggcg tggtgcgcac gctctacttc ttcaagggcc caggcgtgcg
     1861 tatcggcggc cggaacttct cctcgcccgt ggccgcgcgc gttcgcgccg acgtgccggt
     1921 cgagctcgaa gcagcggacg gcgaatgcga gcttttgatg cttcaaggcc gtcccatcgc
     1981 gaagcccgtc gtgcagcacg gacccttcgt gatgaacacg cgcgaagaaa tccagaacgc
     2041 ggttcgcgac taccagcgga cacgcttcgg cggctggccg tggccgagcg acggccccgt
     2101 gcacgcccgc gccgaggggc gcttcgccaa gcacgccaac gggctcatcg agcgggtgga
     2161 gtgagacccc atcggccgca agatttgcgg gcgcgatcca cccgggcgcg aatcgcgcga
     2221 agaaaagccg cggcgatagt ttcacgcaga gtgaacgccc attcgcagcg ttgtcatgct
     2281 tctgtcagca ctttcgtcgg ggagttccgt acgcgcggaa cccgctctaa ggttccgctc
     2341 gcgccacgga gcgcgacgga gcgtgagcac gcatgaccgc cattttgatt ttcttcttcg
     2401 ggcactggct ctcgtcggtg ttcttccaga cgttctacct gcaccgctac ggcgcgcacc
     2461 ggcagttcga gttgtcgcgc ggctgggagc gcacgttcca tttcctcacg tacctgacgc
     2521 agggcgcgag ctacctgcac ccgcgcggct acgcgatcct gcatcgcatg caccatgcgt
     2581 acagcgacac ggagcgcgat ccgcactcgc cagtgttcga gcccaacatc ttcaagatga
     2641 tgtgggagac gaagcaccgc tacgacgact ttgcctatca ccgggtcgag ccggaagcgc
     2701 gtttcgccgc cgccacgccc gactggccgt tcatcgacaa gctcagccag tcgtggccca
     2761 tgcgcatcgt gtggctcgcg ttctacacgg ggttttacgt cgtgttcgcg ccgagcccct
     2821 ggttttacct gctgctcccg gcccactaca tcatggggcc gatccacggc gcgatcgtca
     2881 actactgcgg ccaccgcttc ggctatcgca acttcgcgtc cgcggatgtg tcgcgcaaca
     2941 ccttgatctt cgacttcgtg accctcggcg agctcttcca gaataaccac cacgagttcg
     3001 caatgagccc gaatttcgcg gtgcggcgct tcgaggtcga ccccgcgtac ctcgtgatgc
     3061 gcgtcttcgc ggcgctcggc atcatcaaga acctgagccc gcagcgcgga cgctacccgc
     3121 acgtgccgca cgctccgagc ctgcgcacc
//
LOCUS       DATIML010001343         3287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1731926, whole genome shotgun sequence.
ACCESSION   DATIML010001343 DATIML010000000
VERSION     DATIML010001343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1731926"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VLJ38_23110"
     CDS             complement(<1..437)
                     /locus_tag="VLJ38_23110"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HSU42499.1"
                     /translation="MVDLIAEKLRTDLLSVFDNPAYRPPVLPTIALDIMALAENDDAD
                     VDEIVKLLERDQMLAGSVLRLVSSPIYAGRTPIRSLKAAVLRLGVRVIRDVVFEAAIA
                     RGVFQVNEYTDTVALVARHSTVTAYITRIVCRRAGIDADLAFI"
     gene            complement(590..2740)
                     /locus_tag="VLJ38_23115"
     CDS             complement(590..2740)
                     /locus_tag="VLJ38_23115"
                     /inference="COORDINATES: protein motif:HMM:TIGR01448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HSU42500.1"
                     /translation="MVTLQGEVERITFENEETGFRVLRVGSLEGEGARPGSVAVVGTF
                     QAVGPGTRVRITGDFELDARHGEQLKAQVLVPVAPSTLEGLARYLGSGVIPGVGLALA
                     RRIVEKFGMESLDVLDRAPPRLREVPGIGERRAEQIGKTWAAERATSGVMMLLQAHGA
                     SPHLAMRIVKHYGERAASVVEQAPYRLALEVRGIGFKTADRLARSLGIAGDHPERVQA
                     GILHELDALTTEGHTYTPREVLLERAAKMLDVAEAHVAAALDTLWAAGRVVLEKDRVF
                     LAWLHRAEVALARGLLDLAHEPVTVLPNVEVSLGAFERRAGITLAPSQRRAIEAASEH
                     TVTVITGGPGVGKTTIVRALVDMFERAKLSIRLAAPTGRAAKRLSEASAREATTLHRL
                     LEYDPRGGGFQRGTQSPLEADVVIVDEASMIDVPLGAALVVALKPNARLVIVGDADQL
                     PSVGPGAFLRDVLASRVAESVRLDEIFRQAGASRIVLNAHRILHGEMPESAPADDPTS
                     DFFVVSSSDPVRAADTLLRVVLERIPDRFQFVPGRDIQVLTPMHRGPVGTIALNERLQ
                     LALNAGGRVIAQGGGRLRVGDRVMQTRNDHQREVYNGDLGVVTALDDETGVVTVNFDQ
                     RAVEYEGADLDALLLAYATSIHKSQGSEYPAVVVPLLTSHFVMLSRNLLYTAVTRARK
                     LCVLVADPRALKLALAAVRREERLTSLAERLREG"
     gene            2794..>3287
                     /locus_tag="VLJ38_23120"
     CDS             2794..>3287
                     /locus_tag="VLJ38_23120"
                     /inference="COORDINATES: protein motif:HMM:NF037667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HSU42501.1"
                     /translation="MSYRLHARCACSSLGAPFALAGTTRKYERSRPYTIRHLFLDLAL
                     DVPKKSVQGAATLDFERLAHDAEKLVLDAVGFEVEKVELVSGEQSSPAAYEYDGDRLT
                     VDVQGKRRGKLRVTYRAIPKRGLYFLEPDPSVKDRPRQVWSQCQDEDARHWFPCLDKP
                     HVKMT"
BASE COUNT          508 a         1122 c         1141 g          516 t
ORIGIN      
        1 cagatgaagg cgaggtcggc gtcgatgccg gcccgacggc aaacgatgcg cgtgatgtac
       61 gccgtgacgg tgctgtgccg cgcgacgagc gcgacggtgt ccgtgtattc gttgacttgg
      121 aagacgccgc gcgcgatggc cgcctcgaac acgacgtcgc gaatgacgcg cacgccgagg
      181 cgcaggacgg cagctttgag cgaacggatg ggcgtgcgac ccgcgtagat cggcgagctc
      241 acgaggcgca ggacgctccc cgcgagcatt tggtcgcgtt cgaggagctt gacgatctcg
      301 tcgacgtcgg cgtcgtcgtt ctcggcgagg gccatgatgt cgagcgcgat ggtcggcagc
      361 accggcgggc gatacgccgg gttgtcgaag acggagagca aatccgtccg gagcttctcg
      421 gcgatcaagt cgaccaaacc aactcccatt ttagcggagc atgggcgcga ggcatgcggg
      481 ttttgatggg gccgcgcggt cgagccccgt tttggcccgt tcgcccgcgg ccgaccgatg
      541 tcggcgaagg tgcgagttcg gcttttccgc gccggcgcag acgagctact cagccttcgc
      601 ggagccgttc tgccaagctc gtgaggcgtt cctcgcgccg caccgcagcg agcgcgagct
      661 tgagcgcgcg cggatcggcc acgagcacgc agagtttccg cgcgcgcgtc acggccgtgt
      721 agagcaggtt gcgcgagagc atcacgaaat ggctcgtgag cagcgggacg acgacggcgg
      781 ggtattcgct gccttggctc ttgtggatgc tcgtcgcgta ggcgagcaag agcgcgtcga
      841 ggtcggcgcc ttcgtattcg accgcgcgct ggtcgaagtt caccgtgacg acgcccgtct
      901 cgtcgtcgag cgccgtcacg acgcccagat cgccgttgta aacctcgcgc tggtggtcgt
      961 tgcgcgtctg catcacgcgg tcaccgaccc tgagccggcc gccgccctgc gcgatgacgc
     1021 ggccccccgc gttcagcgcg agctgcaagc gttcgttcag cgcgatggtg ccgacgggtc
     1081 cgcggtgcat cggcgtgagc acctggatgt cgcggcccgg aacgaattga aagcgatccg
     1141 gaatgcgctc gagcacgacg cgcaagagcg tgtcggccgc gcgcaccgga tcgctgctcg
     1201 agaccacgaa gaagtcgctc gtggggtcgt ccgcaggcgc gctctcgggc atctccccgt
     1261 gcaagatgcg gtgagcattg agcacgatgc ggctcgcccc cgcctgccga aagatttcgt
     1321 cgaggcgcac gctctccgcc acgcgactcg cgagcacgtc gcgcagaaaa gcgcccggtc
     1381 cgaccgacgg cagctgatcg gcgtcgccca cgatgacgag acgcgcgttc ggctttagcg
     1441 cgaccacgag cgccgcgccg agcggcacgt cgatcatcga ggcctcgtcg acgatgacca
     1501 cgtcggcttc gagcgggctc tgcgtgccgc gctggaaccc gccgccgcgc ggatcgtact
     1561 cgagcaagcg atgcagcgtc gtcgcctcgc gtgccgaagc ttcggagagt cgcttggccg
     1621 cgcggcccgt gggcgccgcc aaacggatgc tcagcttggc gcgctcgaac atatccacca
     1681 gcgcgcgcac gatggtcgtc ttgccgacgc ccggtccgcc cgtgatgacg gtgacggtgt
     1741 gctcactggc cgcttcgatc gcgcggcgtt ggctgggcgc aagcgtgatg ccggcgcgcc
     1801 gctcgaacgc cccgagcgaa acctcgacgt tcgggagcac cgtcaccggt tcgtgcgcga
     1861 ggtcgagcag gccgcgcgcg agggcgactt cggcgcggtg gagccacgcg aggaatacgc
     1921 gatccttttc gagcacgacg cggcccgccg cccaaagcgt gtcgagcgcc gcggcgacgt
     1981 gggcctccgc cacgtcgagc atcttggccg cgcgttcgag caacacctcg cgtggcgtgt
     2041 aggtgtggcc ctcggtcgtg agcgcatcga gctcgtgcag gatgcccgct tggacgcgct
     2101 cggggtgatc gcccgcgatg ccgagcgagc gggcgaggcg atcggccgtc ttgaagccga
     2161 tgccgcgcac ctcgagcgcg agccgatacg gcgcctgttc gacgacgctc gcggcgcgtt
     2221 cgccgtaatg tttgacgatg cgcatcgcga ggtgcggact cgcgccgtgc gcttggagca
     2281 gcatcatcac gccgctcgtc gcgcgctcgg ccgcccacgt cttgccgatc tgttcggcgc
     2341 gacgctcgcc gatgcccggc acctcgcgca ggcgcggtgg cgcgcgatcg agcacgtcga
     2401 ggctctccat gccgaacttt tcgacgatgc gccgtgcgag cgcgagcccg acgcccggaa
     2461 tcacccccga gccgaggtag cgcgcgagac cctcgagcgt gctcggcgcg acggggacga
     2521 gcacttgcgc cttcaactgc tcgccgtgcc gggcgtcgag ctcgaagtct cccgtgatac
     2581 gcacccgcgt ccccggtccg accgcctgaa atgtgccgac gacggccacg gagccgggac
     2641 gcgccccttc gccctcgagt gatccgacgc ggaggacgcg gaaacccgtc tcctcgttct
     2701 cgaaggtgat gcgctcgacc tcgccctgca gcgtgaccat tggtgggcag gcgaccttgt
     2761 ttccgccgtc cgcgtggcgc aaggtagcgc ttcatgtcct accgcctgca cgctcgttgc
     2821 gcttgttcca gcctgggagc gccgtttgct ctggctggga ccacgcgaaa atacgagcgc
     2881 tcgcgcccct acacgatccg ccacctgttc ctcgatttgg ccctcgacgt gccgaaaaag
     2941 agcgtccagg gcgcggcgac gctcgacttc gagcggctcg cccacgacgc cgaaaagctc
     3001 gtgctcgacg ccgtcggctt cgaggtcgaa aaggtcgagc tcgtgagcgg cgagcaaagc
     3061 tcgccggccg cctacgaata cgacggcgat cggctgacgg tcgacgtgca aggcaagcgc
     3121 cgcggcaagc tgcgcgtgac ctaccgcgcg atcccgaagc gcgggcttta cttcctggag
     3181 cccgacccga gcgtcaaaga ccgcccgcgc caggtctggt cccagtgcca ggacgaggac
     3241 gcgcgtcact ggttcccctg tctcgacaag ccgcacgtca agatgac
//
LOCUS       DATIML010001344         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4327914, whole genome shotgun sequence.
ACCESSION   DATIML010001344 DATIML010000000
VERSION     DATIML010001344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4327914"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..890
                     /locus_tag="VLJ38_23125"
     CDS             132..890
                     /locus_tag="VLJ38_23125"
                     /inference="COORDINATES: protein motif:HMM:NF040596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MXAN_2562 family outer membrane beta-barrel
                     protein"
                     /protein_id="HSU42502.1"
                     /translation="MKKLGSALLGCAAFLAASHGFAQGVDDFGPYGGLERHERMQSPQ
                     TVAVEIRFGPYRPHVDDDVDGTPYKDTFGNSTRWQGGLEVDWQVLRIHKLLSFGPGLG
                     WAYTHSSAKAPLASGKGLSAQDTTLGIMPFNLLGVLRFEAIADRTWVPIVPYVKVGLG
                     AALWWSSIGDSPTHFNGEAGKGSSFGYVAAVGTMLRLDQLDLISTANADANLGINHSS
                     LFIEYYKSNLNSFGSGATMEVGTSAWVMGLALEI"
     gene            complement(937..1698)
                     /locus_tag="VLJ38_23130"
     CDS             complement(937..1698)
                     /locus_tag="VLJ38_23130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42503.1"
                     /translation="MAPAAVRIPDPRHTPVPFDGSPLGPQIFIHEGARQTLERRLELA
                     FGAAVQLAVTDNLRRMVSHTRVRGTRRVRVHMMFLGAPERVRQALVEYIVRGDRRASG
                     LLGDFIAANSHRIRASRPVTGPLRTRGASHDLAEILASVNAQYFGGAVGDVLVTWGRR
                     TSPLGTKARQSIKLGSYSATERLIRVHPALDRDWVPRYFLSYIVFHELLHHVIPAVPG
                     SLHPPELLQREREFRHYERAIAWEQKNIARLLRAK"
BASE COUNT          363 a          708 c          703 g          356 t
ORIGIN      
        1 ggcggcggtt tttgttcgct catgggcgct cagcgttccc aagcgctcgg tgcgttcggc
       61 gccctcgccg gcatcgcgct cgtcatccgg cgaaaggctc gccggcgcgc ggatcgtaag
      121 gacgcagcct gatgaagaag ctcggttcgg cgttgctcgg ctgcgccgca ttcctcgccg
      181 cctcgcacgg attcgctcag ggcgtggacg atttcgggcc ctacggcgga ctcgagcgcc
      241 acgaacgcat gcagtcgcct caaacggtgg ccgtagaaat ccgtttcggc ccctaccgtc
      301 cccacgtcga tgacgacgtc gatggcactc cctacaagga cacgttcggc aactcgacgc
      361 gctggcaggg cggcctcgag gtcgactggc aggtcttgcg catccacaag ctcctgagct
      421 tcggtcccgg cctcggctgg gcttacaccc actcgagcgc caaagcgccg cttgcgagcg
      481 ggaagggtct gtccgcgcag gacacgacgc tcggcatcat gccgttcaac ctgctcggcg
      541 tcctccgctt cgaggcgatt gccgaccgca cgtgggttcc catcgtgccc tacgtgaagg
      601 tcggcctcgg cgccgcgctc tggtggtcga gcatcggcga cagcccgacg cacttcaacg
      661 gcgaggcagg caaaggctca tcgttcggct acgtcgccgc ggtcggcacg atgctgcgcc
      721 tcgatcagct cgatctcatc agcacggcca atgccgacgc taacctcggc atcaaccact
      781 cgtcgttgtt catcgagtac tataagagca acctgaacag cttcggctcg ggcgcgacga
      841 tggaagtcgg cacgagcgcg tgggtcatgg gcctcgcgct cgaaatctga ggggacggcg
      901 acgtccggcg cggacgtacg gcgccgttcg gcgccgctac ttcgcgcgca agagccgcgc
      961 gatgttcttc tgctcccacg caatcgcgcg ctcgtagtgc cgaaattcgc gttcgcgctg
     1021 caaaagctcg ggcggatgga gcgaccccgg cacggctggg atcacgtggt ggagcagctc
     1081 gtgaaaaacg atgtacgaga ggaaatagcg cggcacccag tcccgatcga gcgcggggtg
     1141 cacgcggatg agcctttcgg tcgcgctgta gctgccgagt ttgatgctct gccgggcctt
     1201 cgttccgagc gggctcgtgc gccggcccca cgtgacgagc acgtcaccga cggcgccgcc
     1261 gaaatattgc gcgttcacgc tcgccaatat ttcggcgagg tcgtgagagg cgccgcgcgt
     1321 gcggagcggt cccgtaacgg gacgggaggc ccggatgcga tggctgttcg ccgcgatgaa
     1381 atcgccgagc aggcccgagg cgcgccggtc gccacgcacg atgtattcga ccagagcctg
     1441 gcgcacgcgc tccggcgccc ccagaaacat catgtgcacg cgcacgcgcc gggtaccccg
     1501 cacgcgcgtg tgggacacca tgcgcctgag gttgtccgtg acggcaagct gaacggcagc
     1561 cccgaacgcg agctcgagcc gccgttcgag cgtctggcga gcaccttcgt ggatgaagat
     1621 ttgggggccc agcgggctgc cgtcgaaggg aaccggcgtg tgccgcggat ccggaattcg
     1681 caccgcggct ggcgccatgc gcggcgctac tgcccgagcg agacgcttgg cacgaccgcg
     1741 agacgcggac gccgaaagcc aggggaggcg gagctcagca gacgacatga tggaaggcct
     1801 ggaacggagt tcgatcttcg acgtatgaga cacgatcctg agcgtcaaga aatcgaaaac
     1861 agtcccgtaa tttcaactat ttagaaacca attggcccgt gcgcccgtcc gggaacctaa
     1921 gtacgcgttg ccccagggct tccggtcgtc cccctcagct ttgacgcccg attttcactc
     1981 tgggggcccg ccccccgatc cccaccctat ccacagctag tccttcgaga tttcgctcgt
     2041 ttgccgctcc gtggttggcg cgaaggtcga acgtgccggc gcacccgagt cgcgcggagg
     2101 cagtgcgcga cccgggagcg cggcgaaatt
//
LOCUS       DATIML010001345         5358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2595053, whole genome shotgun sequence.
ACCESSION   DATIML010001345 DATIML010000000
VERSION     DATIML010001345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 5358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5358
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2595053"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VLJ38_23135"
     CDS             complement(<1..278)
                     /locus_tag="VLJ38_23135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42504.1"
                     /translation="MFVRGCLRFGSFGTCLVLAGQLRAAPVDAGAAHEPYVPAETQVP
                     AEALVPGARAAAEPGARSEPSSRGVTALVTGLATAGASLAYGGFLLTSG"
     gene            complement(361..1665)
                     /locus_tag="VLJ38_23140"
     CDS             complement(361..1665)
                     /locus_tag="VLJ38_23140"
                     /inference="COORDINATES: protein motif:HMM:NF013504.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 6 protein"
                     /protein_id="HSU42505.1"
                     /translation="MFHTLEDKMMMKSALSALVFGVYGAASGCAVETNEASLGAQVDG
                     LHGRPSCHDSGTRFFVPPPNSGAKDQIKALKAAHQKHDAALIEDLIATPQAVWFTSGT
                     ADSVKKDVKKVVKKAASDHTVPVLVAYDIPFRDCAGFSAGGATTTAEYLDWIDGFAKG
                     IGDAHAVVILEPDSLGIVPFNTDINGNMEWCQPADADPATAASERYAQLNAALDRLLE
                     QPNVDVYLDGTHNRWLGSGDAAKRLVQAGVTRAQGFFLNVSNFQKTEELTKYGTWISG
                     CIAFANNAEEGGWRLGHYDWCASQYYPANVDDFSTWSLTDDWYTSNLGTAVATTHFVM
                     DTSRNGQGRWLAPSDAPAGDPQDWCNPPDRGAGLRPSTDTSSELIDAYLWIKIPGESD
                     GQCNRWAPPGDPDPVRMMQDPAAGLWFPEMALELAKDANPAF"
     gene            complement(1774..2055)
                     /locus_tag="VLJ38_23145"
     CDS             complement(1774..2055)
                     /locus_tag="VLJ38_23145"
                     /inference="COORDINATES: protein motif:HMM:NF013346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM165/GDT1 family protein"
                     /protein_id="HSU42506.1"
                     /translation="MDFKLLATTFVAVFLAELGDKTQLATLSFASGGSSRWAVFLGSA
                     AALVCTSALAVLGGEAVARVIPPLLLKRLSGIAFVVIGLWVLISTRARA"
     gene            2178..2504
                     /locus_tag="VLJ38_23150"
     CDS             2178..2504
                     /locus_tag="VLJ38_23150"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSU42507.1"
                     /translation="MTREHALRAKLAHALRQARRVRGLTQRTLAARAGIGEKYLSRIE
                     RGLVTPSLLVALELTAALGVPLTELLERPSLEGPPAPVSILKLLADRSASELERAERV
                     LRALFA"
     gene            complement(2827..3150)
                     /locus_tag="VLJ38_23155"
     CDS             complement(2827..3150)
                     /locus_tag="VLJ38_23155"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU42508.1"
                     /translation="MREGPFRRNFGRAVKAAREGRGLTQRELAEAARIADKYLSRIEL
                     GMATPSVYVACRLAQALGVSLDALIVASPKLADHELGSVLRILHSLEPSQIERVRRIL
                     LEVLR"
     gene            complement(3261..4238)
                     /locus_tag="VLJ38_23160"
     CDS             complement(3261..4238)
                     /locus_tag="VLJ38_23160"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSU42509.1"
                     /translation="MNSWKGSCGPGVLARASDGRAALSSELAGALERVRDAAQGAVNA
                     DSHEQRALELKEIIGEARRALALNTSLEASAGGERSSQAKIVTASSQPPVSGVVGADW
                     LVRSVVHDLNNMLLVIQNCAEAMRQQPNLVAREAGVVEDAVTQATRLIAKLLPPDSAV
                     GRLPGTDLSEAVLRFSGVLRSLVGERVGVVTRLASDLPSARCDDIAIGRILSNLAANA
                     RDAMPDGGTLTLETGVEQRKSPDGLDVETVPYVVLAVSDTGSGMDPETKGRAFEAFFT
                     TKARGKGSGVGLATVRELVHGAGGFLELDTSIGSGTTVRVFLRALGGWR"
     gene            complement(4477..>5358)
                     /locus_tag="VLJ38_23165"
     CDS             complement(4477..>5358)
                     /locus_tag="VLJ38_23165"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSU42510.1"
                     /translation="TASGGAGGSMSPTGGSAGSPAGGSAGQAVGSGGMTTGGGGLAGS
                     VPSKGCGAAAPATGAQHIDVGGTMRDYIVRLPDGYDPNTPHRIIFAFHGMQGSADQVD
                     TGGPPNAGLDPTGPYYGIKDLSHDTIFVAGQALSGGWTNTNDRDIDYVKALVSELEGT
                     LCIDQSRVFATGFSYGAIMTITVACNMADVFRAVAPMSGSLQNGCPASDHSIAYWASH
                     GTMDTTIDISKGEAARDEFVKRNKCSMTTQATTPDGCTAYQGCAAGYPVNWCPFDGIH
                     QPPPFSGPAIWAFLSQF"
BASE COUNT          861 a         1821 c         1781 g          895 t
ORIGIN      
        1 ccgctcgtga gcaagaagcc gccgtaggcg agcgacgcgc cggccgtcgc gaggccggtc
       61 acgagcgccg tcactccgcg cgagctcggt tcggaacgcg cgccgggctc cgccgccgca
      121 cgcgcgccgg gcaccagcgc ctcggccggc acttgcgttt ctgcgggaac gtacggctca
      181 tgcgccgcgc cagcgtcgac cggagctgcg cggagctgac ccgcgagcac caggcacgtt
      241 ccgaagctcc cgaagcgcaa gcacccgcga acgaacacgc cgcgcggacc ctcgcacggc
      301 agggtccgcg caacaagccg ccgcgctcag gcgtttgcgc gagaaccgtc gagtcgagtc
      361 ttagaaggcc gggttcgcgt ccttcgcgag ctcgagcgcc atttccggga accaaaggcc
      421 cgcggccgga tcttgcatca tgcgtacggg atccggatcg ccggggggag cccaacggtt
      481 gcattggccg tcggattcac ccgggatctt gatccaaagg tacgcgtcga tgagctccga
      541 gctcgtgtcc gtgctcggcc ggaggccggc gccacgatcg ggcgggttgc accaatcttg
      601 gggatcgccc gcgggcgcgt cgctcggcgc gagccagcgg ccctggccgt tgcggctcgt
      661 gtccatgacg aaatgcgtcg tcgccacggc ggtgccgagg ttcgaggtgt accagtcgtc
      721 ggtgagcgac caggtgctga agtcgtcgac gttggccgga tagtattggc tcgcgcacca
      781 atcgtagtga ccgagtcgcc agccgccttc ctcggcgttg ttcgcgaagg cgatgcatcc
      841 cgaaatccaa gtgccgtatt tcgtgagctc ctccgtcttc tggaaattcg agacgttgag
      901 gaagaagccc tgcgctcgcg tcactcccgc ttgcacgagc cgcttggcgg catcgccgct
      961 gccgagccag cggttgtggg taccgtcgag gtaaacgtcg acgttcggct gctcgagtag
     1021 ccgatcgagg gcagcgttga gctgagcgta acgctcggac gcggcggtgg cgggatccgc
     1081 gtccgccggc tgacaccact ccatgtttcc gttgatgtcg gtgttgaacg ggacgattcc
     1141 gagactgtcc ggctcgagga tcacgacagc gtgcgcgtca ccgatgccct tggcgaaacc
     1201 gtcgatccag tcgaggtact cggccgtggt cgtcgcacca ccggccgaga aaccggcgca
     1261 atcccggaac gggatgtcgt aggcgacgag cactggcacc gtgtggtcgc tggccgcctt
     1321 ctttacgacc tttttcacgt ctttcttcac gctgtcggcc gtgccgctcg tgaaccagac
     1381 ggcttgcggc gtagcaatca agtcttcgat cagtgccgca tcgtgtttct gatgggctgc
     1441 tttcaaggcc ttgatttgat ctttggcgcc ggagttgggc gggggcacga aaaagcgcgt
     1501 ccccgagtca tggcaactcg gccggccgtg caaaccgtcg acctgggcac cgagacttgc
     1561 ttcgttcgtc tcgacggcgc agccgctcgc cgcaccatac acaccaaaaa ccagagcgct
     1621 tagcgcgctt ttcatcatca tcttgtcctc cagcgtgtga aacaaagtgc gaactagtta
     1681 gttacgcacg ccccacccac gcgggtgaca atagtgatct cgaacgcttc tcgcatgagc
     1741 atttgttggc gcggccggcc gcccgccgcg gcgtcaggcc cgagcgcgag tcgaaatcaa
     1801 gacccacagc ccgatcacga cgaacgctat tcccgacagg cgcttgagca ggagcggcgg
     1861 aatcacgcgc gcgacggcct cgccgccgag caccgcgagc gcagaagtgc acacgagcgc
     1921 cgcggccgag ccgagaaaca ccgcccagcg cgagctgcca ccgctcgcga acgacagcgt
     1981 cgccagctgc gtcttgtctc cgagctcggc cagaaacaca gccacgaacg tggtcgccaa
     2041 tagtttgaaa tccatgcggg ctgtgtagct cggctgggcc cgagttcgag tagaatcagg
     2101 cgctcggagg cgcgtgaccc gatgacgctc ggcctgagtt cgaaattcgc acacggcctg
     2161 ctctggcggt ccggcgcttg acacgcgagc atgctctccg cgcgaagctc gcccacgcgc
     2221 tccgtcaagc tcgccgggtg cgcgggctca cgcagcgaac gctcgcggcg cgcgcgggca
     2281 tcggtgagaa gtatttgtca cgcatcgagc gcggactcgt cacgccgtcg ctgctcgtcg
     2341 cgctcgagct cacggccgcg ctcggcgtac ccttgaccga gctgctcgag aggccgtcac
     2401 tcgaaggccc gcccgcgccg gtctcgattt tgaagctgct cgcggaccgc tcggcgagcg
     2461 agctcgagcg cgctgaacgc gttttgcggg ctctgttcgc ctgaggcccg gcgtccgtaa
     2521 gcggccctgc gcggcgcacg tcgcccggcg gccgcgtgct cgatcggaca tcgactcccg
     2581 gaaccctgtg cgggctgcgc ggccgcgttg ggcggactat ggtgcttgcc gagacgacag
     2641 ccgccatgcc acgtaggccc tcggaaatct gctttttctg cccggaagcg ctgtaccagg
     2701 cgctcgtgaa ggaacttgcg cgggccacgg gccgacctcg cacggccatc gagcgcgatt
     2761 tctcgcgcta cgtcgagcgc gtgttgcgag gcctggtcgc ggagcgcggc gcgctcgcga
     2821 agctcgtcag cgcagcacct cgagcaggat ccgccgcacg cgttcgatct gcgaaggctc
     2881 gagcgagtgg aggatccgca gcaccgagcc gagctcgtgg tccgcgagct tcggtgaagc
     2941 gacgatgagc gcgtcgaggc tcacgccgag cgcttgagcg agccggcagg cgacgtacac
     3001 ggacggcgtc gccatgccga gctcgatgcg ggaaaggtac ttgtcggcga tacgcgcggc
     3061 ttcggcgagc tcacgctgag tgagacctcg cccttcgcgg gcggctttga cggctcggcc
     3121 gaagttcctt cggaacggtc cttcccgcac gggccgaggc tagacgcgcg gccggcgccc
     3181 gagaaccacc gataggtggt gcggccttgg agccccgtat acctatcggt atacctgcgg
     3241 cagcgcgctt tcggtccgct tcaacgccag ccgccgagag cgcgcaggaa gacgcgcacc
     3301 gtcgtgccgc tcccgatact cgtgtcgagc tcgaggaagc cgcccgcgcc gtgcacgagc
     3361 tcgcgcaccg ttgccagtcc aacgccgctc cccttaccgc gcgccttggt cgtgaaaaac
     3421 gcttcgaacg ctctgccctt cgtctcgggg tccattccgc tgcccgtgtc ggacaccgcg
     3481 agcacgacgt aagggacggt ttcgacgtcg agaccgtcgg gggacttgcg ctgctcgacc
     3541 cccgtttcga gcgtcaaagt gcccccgtcg ggcatggcgt cgcgcgcgtt ggcggcgagg
     3601 ttcgacaaga tgcgcccgat cgcgatgtcg tcgcagcggg cggacggcag gtcggaagcg
     3661 aggcgcgtga cgacgccgac gcgctcaccc acgagtgagc ggagcacccc cgaaaaccgg
     3721 agcaccgctt ccgacaggtc cgtaccgggc agccgcccca cggccgaatc gggaggcaag
     3781 agcttcgcga tcaggcgcgt cgcttgcgtt accgcgtctt cgacgacgcc cgcctcgcgc
     3841 gcgacgaggt tcggctgctg tcgcatggcc tcggcgcagt tctggatcac gagcagcatg
     3901 ttgttgagat cgtgcacgac gctgcggacg agccaatcgg cgccgaccac accgctcacc
     3961 ggcggctgcg acgacgccgt gacgattttg gcttggctcg agcgttcacc gccagcgctc
     4021 gcttcgagcg acgtgttcaa cgcgagcgcg cgccgagcct cgccgatgat ctctttgagc
     4081 tcgagcgcgc gctgttcgtg cgagtcggcg ttgacggcgc cttgcgccgc gtcccgcaca
     4141 cgctcgagcg cgccggcgag ttcgctcgac aaggcagccc gtccgtcgga cgcgcgcgcg
     4201 agcacacccg gaccgcagct gcctttccat gaattcatgc ttcccgaccc tgaagaggcc
     4261 cgctcacaac ggagcaaacg gccacgccta tgtttgggta gtcatatacc tatcggtaga
     4321 gtggcacaag taggcggcag cccccgcgaa ctcgtacgct cctcggagct tgcgcgcacc
     4381 tcgggtgtcc atgtgggcac tcgggcgttt tgcccactcc acggcacggg cgcagcagca
     4441 cgccgtcttc acgcagcggg cagcgcgcgt ctagcgctaa aactgcgaca ggaatgccca
     4501 gatcgcggga ccagagaacg gcggcggctg atgaatccca tcgaaaggac accagttcac
     4561 cgggtagccg gccgcgcagc cctgataagc ggtgcagccg tcgggcgtcg ttgcctgcgt
     4621 ggtcatgctg cacttgttac gcttcacgaa ctcgtcgcgc gccgcttcgc ctttgctgat
     4681 atcgatcgtc gtgtccatcg tgccgtgtga ggcccagtag gcgatggagt gatcgctcgc
     4741 ggggcagccg ttctggagcg agcccgacat cggcgcgacg gcgcggaaca cgtcggccat
     4801 gttgcacgcc acggtgatgg tcatgatcgc gccgtagctg aagccggtcg cgaacacgcg
     4861 gctctgatcg atacagagcg tcccctcgag ctcgctcacg agggccttga cgtagtcgat
     4921 gtctcggtcg ttggtattgg tccagccgcc gctcagtgcc tgacctgcga cgaagatcgt
     4981 gtcgtgcgag agatccttga taccgtaata cggacccgtg ggatcgaggc cggcgttcgg
     5041 cggaccaccg gtgtccacct gatcagccga gccttgcatc ccgtgaaacg cgaagatgat
     5101 gcgatgtggc gtgttcgggt cgtagccatc gggcaagcgc acgatgtagt cgcgcatcgt
     5161 gccgccgaca tcgatgtgct gcgcgccggt cgcgggagcc gccgcgccgc agcccttgct
     5221 cggcacggag ccggccaagc ccccgccacc ggtcgtcatg ccgccactgc ccaccgcttg
     5281 tcccgcgcta ccgccagctg gcgagccggc gctgccgccg gtcggactca tgctgccgcc
     5341 ggcgccgccg ctcgctgt
//
LOCUS       DATIML010001346         1538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_574753, whole genome shotgun sequence.
ACCESSION   DATIML010001346 DATIML010000000
VERSION     DATIML010001346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_574753"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..628
                     /locus_tag="VLJ38_23170"
     CDS             <1..628
                     /locus_tag="VLJ38_23170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42511.1"
                     /translation="TETGVGERHLLSLLRGHRMKRLLLRMLDPEEFLSDYGVRSLSRY
                     HREHPFVLEVGGDRHVVDYEPGVSSSGLFGGNSNWRGPIWMPCNYLLIESLQKFHHYY
                     GDDFKVECPTGSGHFLTLLEVADELGRRLTRLFLPDEHGRRPCYGNQEKFQTDPHFRD
                     YLLFHEYFHGDNGEGLGAMHQTGWTALVAKLIQPRRPPAGSERPSRSY"
     gene            640..1152
                     /locus_tag="VLJ38_23175"
     CDS             640..1152
                     /locus_tag="VLJ38_23175"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSU42512.1"
                     /translation="MLKGRRFGLALVAASLALLAYVVFGGSDEDKVLARLKEVARAVE
                     TRADETNVLLRTARLNGVFKEALEPDVTFTAPELGSVSGRHALAVLAGAAPVNFGAVT
                     VSVGATDIHVQGAVAHAVSEVTLTAARGGELRREQRSVRFELRRSSGEWRIGTIDVEA
                     TKEAQPEARP"
     gene            1257..>1538
                     /locus_tag="VLJ38_23180"
     CDS             1257..>1538
                     /locus_tag="VLJ38_23180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42513.1"
                     /translation="MSTRAPLVPSPELCCAVGRAPKQSTERPLAWAAGLAAALLLGAS
                     GCGSASPQAAGDDDTAGTGGASASGGTGATGGTSGTQGLGGSGGSGGSGG"
BASE COUNT          236 a          504 c          547 g          251 t
ORIGIN      
        1 gaccgaaacg ggcgtcggcg agcggcatct tttgtcactg ctgcgcggtc atcgcatgaa
       61 acgcttgctg cttcgcatgc tggatccaga agagtttcta tccgactacg gcgtgcgctc
      121 tctctcgcgt taccaccgcg agcacccgtt cgtgctcgag gtcggcggcg accgccacgt
      181 ggtcgattac gagccaggcg tgtcctcgag cgggctcttc ggcggcaatt ccaattggcg
      241 cggtccgatc tggatgccct gcaattacct gctcatcgag tcactgcaga aatttcatca
      301 ctattacggt gacgatttca aggtggagtg tccgaccggc tccgggcatt tcctcacgtt
      361 gctcgaggtc gccgacgagc tcgggcgtcg cctcacgcgg ctctttttgc ccgacgagca
      421 cggccgccgt ccctgctacg gcaaccaaga gaagtttcag acggatccgc actttcgtga
      481 ctacctgctc tttcacgaat attttcacgg cgacaacggc gagggactcg gcgcgatgca
      541 tcagacgggc tggacggcgc tcgtggcgaa gctgatccag ccgcgccgcc cgccggcggg
      601 atccgagcgt ccctcgcgct cgtactgagc ccggattcga tgctcaaggg ccgccgcttc
      661 ggtctcgcgc tcgtggcggc atcgctcgcg ctgctcgcgt acgtcgtctt cggcggctcc
      721 gacgaagaca aagtgctcgc gcggctcaag gaggtcgcgc gcgccgtcga gacgcgcgcg
      781 gacgaaacga acgtcctctt gcgcacggcg cgcctcaacg gggtgttcaa ggaggcgctc
      841 gagccggacg tcacgttcac ggcgccggag ctcgggtcgg tgtcgggcag acacgcgctc
      901 gccgtgctcg caggcgccgc gccggtgaat ttcggcgcgg tgacggtgag cgtcggcgcg
      961 acggacattc acgtccaagg cgctgtcgcg cacgcggtgt cggaggtgac gctcacggcg
     1021 gcgcgcggtg gcgagctcag acgcgagcaa cgcagcgtgc gcttcgagct ccggcggagc
     1081 agcggggagt ggcgcatcgg cacgatcgac gtcgaggcga cgaaggaagc acagcccgaa
     1141 gcgagaccgt gagagtttgg ttggggggca cggcgcggct cgagcgcgct tgacccgcta
     1201 cgcgaatcag gcaacctaca cgcgagaccg ctcgcagcgg ctctcttggc ttaagaatgt
     1261 cgacgcgtgc tcctctcgtt ccatcgccgg agttgtgctg cgccgtagga cgcgcgccga
     1321 agcaatcgac cgagcgaccg ctcgcgtggg cggcggggct cgctgccgcg ctgctgctcg
     1381 gcgcgagcgg ctgcggcagc gcttcgcccc aggcggccgg ggacgacgac actgccggca
     1441 cgggcggcgc gagcgcgagc ggcggcacgg gtgcgaccgg cggcacgagc ggaacgcagg
     1501 gcctcggcgg cagcggcggt tcgggcggca gcggcggc
//
LOCUS       DATIML010001347         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1151479, whole genome shotgun sequence.
ACCESSION   DATIML010001347 DATIML010000000
VERSION     DATIML010001347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151479"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="VLJ38_23185"
     CDS             complement(<1..188)
                     /locus_tag="VLJ38_23185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSU42514.1"
                     /translation="MAWLLLIPYALVLILLCSYGAHRAHLAWQCRVYAKKLARLESTP
                     RLPASLPTVTIQLPLYNEA"
     gene            complement(320..>1664)
                     /locus_tag="VLJ38_23190"
     CDS             complement(320..>1664)
                     /locus_tag="VLJ38_23190"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSU42515.1"
                     /translation="AEARHRFENEARAAAALRSKHVVEVYDHGVMDDGRPFIVMEFLD
                     GEPLDRRLDRLGRLPPKDTARIVGMVCRALAKAHAGGIVHRDLKPENVFLVWDDEDGA
                     DVAKVVDFGIAKFTDASATSSSATRTGSVLGTPYYMSPEQARGLRSVDYRSDLWSVGV
                     IAFRCMTGRLPFEGEAVGDVLVKLCTAPIPVPSSIAPDLPPAFDAWLLHALGREPESR
                     FQSAMELGRALANVCGLTAPLTPNSGEQLALGSLPPRTSPLPGRVPIQNSPFAATTPS
                     PALTPAAVQTGAPITQTPAPSAKPTKSAIIVAALAAFAVLGIGIGVLIKGLAKSEAPL
                     ATGAPELGTAPKAAPEAMPSAPVAEPVPHVAVAEPVARASATAAPATTASAVAVSPAQ
                     VVTQPSFAAALPSAVLAQPPPMAAHRPPPVHALKPKAAAATSETAAPKPVNDMGF"
BASE COUNT          268 a          547 c          593 g          256 t
ORIGIN      
        1 gcttcgttgt agagcggcaa ctggatcgtg accgtcggca gcgaggccgg cagtcgcggc
       61 gtgctctcga gtcgcgcgag cttcttcgcg tagacgcggc actgccaggc aaggtgcgcg
      121 cgatgcgcgc cataactgca aagcagaatc aggacgagcg cataggggat cagcaacagc
      181 caggccatcc gttcagcgag ttatcaccga accgccggcc gaatgtcaca caagtgtaaa
      241 tcgttgcagc ttgatgtcga tccgcgcccg gatacccctc aaaaggcggc agatcgcctc
      301 gaaatcgagg tgtgcttgct caaaatccca tgtcgttgac cggctttggc gcagcggtct
      361 cggacgtcgc cgccgctgct tttggcttca gcgcgtgaac cggcggcggg cgatgagccg
      421 ccatcggagg cggctgcgcc aagactgcgg acggcagagc cgccgcgaag gacggctgcg
      481 tcacgacctg cgccgggctc acggcaacgg cactcgccgt cgtagctggc gctgccgtcg
      541 cactcgcgcg cgcgacgggt tcggccacgg cgacgtgcgg cacgggttcg gccacgggag
      601 cgctcggcat tgcttcgggc gcggctttcg gcgcggttcc gagctcggga gctcccgtcg
      661 caagcggcgc ttcgctcttg gcgagccctt tgatgagcac gccgatgccg atgccgagga
      721 cggcgaaggc cgcgagggca gcgacgatga tggcgctctt cgtcggcttg gcgctcggcg
      781 cgggcgtctg ggtgatggga gcaccggttt gaaccgcggc gggcgtgagc gccggtgacg
      841 gcgtcgtggc cgcgaacgga ctgttttgga tcggtacgcg ccccggcagc ggtgacgtgc
      901 gcggcggcag ggagccgagc gcgagttgct cgcccgagtt cggcgtgagc ggcgcggtga
      961 gcccgcacac gttcgcgagc gcgcgcccga gctccatcgc gctctgaaag cgcgactccg
     1021 gctcacgccc gagcgcgtgc aggagccaag cgtcgaaggc gggcggcaaa tccggtgcga
     1081 tcgacgacgg cacggggatc ggcgccgtac agagcttgac gagcacgtca cccacggctt
     1141 cgccctcgaa cggcagtcgt cccgtcatgc agcgaaatgc gatgaccccg accgaccaca
     1201 gatccgagcg gtaatcgacg ctgcgcaggc cacgcgcctg ttcggggctc atgtagtacg
     1261 gggtgccgag caccgaaccc gtacgcgtcg ccgacgatga ggtcgcggac gcgtccgtga
     1321 atttggcgat gccgaaatcc accaccttgg cgacgtcggc gccgtcctcg tcgtcccaaa
     1381 ccaaaaagac gttttcgggc ttgagatcgc gatgcacgat gccgccggcg tgcgccttgg
     1441 cgagggcgcg gcacaccatg ccgacgatgc gcgccgtgtc cttgggcggc agccgcccga
     1501 gccgatcgag ccggcgatcc aggggctcgc cgtcgaggaa ctccatgacg atgaagggcc
     1561 gtccgtcgtc catcacgccg tggtcgtaga cctcgacgac gtgcttgctc cggagcgcgg
     1621 ccgccgcgcg cgcttcgttt tcgaaacgat ggcgcgcctc cgcg
//
LOCUS       DATIML010001348         2236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4328788, whole genome shotgun sequence.
ACCESSION   DATIML010001348 DATIML010000000
VERSION     DATIML010001348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4328788"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..1802
                     /locus_tag="VLJ38_23195"
     CDS             312..1802
                     /locus_tag="VLJ38_23195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU42516.1"
                     /translation="MTVLRMHGVGAGWASAPLFDSVSLVLERGIYGLVGANGAGKTTL
                     LSLLAGELAPHEGSIVRSPADAVIAYCRQRVDVRTDDIDALAVRDDGLGAELRGRLGL
                     EPSDVERWATLSPGERKRWQIAAALAREPDVLLLDEPTNHLDADARKRLVDALRRFTG
                     LGVLVSHDRFLLDALTTATLRVHRRGVTLWPGRFSMAKELWERARAGEETAHGVARER
                     VRALEAELDAARRTQGAAARNVSARARMKNRNDGDARGILATTKAQWASAKAGRVTAA
                     ARTELDRAQKAVPAIERDVTLGGKIFAAYERAPAQVLFHLHEDALTRGSHVVLRDVRL
                     TLGREERVRIEGPNGAGKTTLLEALLRSHARAERLLYLPQELGDEAKATALAALRSAS
                     SEARGRVLSIFAALGSEPERVLGADAAHLSPGEARKLVLAAALSRQVWALVMDEPTNH
                     LDLPSIERLEAALAAYPGAIVLVTHDEAFAASVTARSLRVEGGLVT"
     gene            complement(1834..>2236)
                     /locus_tag="VLJ38_23200"
     CDS             complement(1834..>2236)
                     /locus_tag="VLJ38_23200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42517.1"
                     /translation="GSTGSTGSTGSTGSTGSTGSTGSTGSTGGICNDNLIVTSSGEHQ
                     HTLLVTPAEMAAGEELTTLSSTTLGHAHYVRITAADFAALKAGMQVRKKSCAGPDHEW
                     VLACYFGASPAGAPSCSDDCGDGTSPANACP"
BASE COUNT          349 a          791 c          756 g          340 t
ORIGIN      
        1 aagcgggcac ctacggcgta agcgagcttt ccggtgaacc catcgagtac ccgcgcctgt
       61 cggcggtgcc ctgggcgcgc tacaccgcgc aagagcaaga agagatcgag cgcgccgccc
      121 gacgctgacc ggcaaggacc caacatgcgg cacgagcgcg acttcgtgcg gcgtgttaga
      181 gtgccgttgc gctgctcacc cggcgcgacc atgcgctgag tcaccgaaac cccaatccac
      241 cgcgagaacg accgcgttct ctgacgtgaa ctgcgcgcct tcgcgtgcgc ctttggaatt
      301 cggagtgact catgaccgtg ctcagaatgc acggagtcgg cgctggttgg gcgtcggctc
      361 ctctgttcga ttcggtgtcg ctcgtgctcg aacggggcat ttacggcctc gtcggggcga
      421 acggcgcggg caagacgacg ctgttgtcgc tcttggcggg cgagctcgca ccccacgaag
      481 gcagcatcgt gcgctcccct gcagacgccg tgatcgcgta ttgccggcag cgcgtcgacg
      541 tccgcacgga tgacatcgac gcgctcgccg ttcgcgacga cggcctcggc gccgagctcc
      601 gcggacgctt ggggctcgag ccgagcgatg tcgagcgctg ggccacgctc tcacccgggg
      661 aacgcaaacg ctggcaaatc gccgcggcgc tcgcgcgcga gcccgacgtg ctcctgctcg
      721 acgaaccgac gaaccatctc gatgccgacg cacgcaagcg gctcgtcgac gcgctccggc
      781 gtttcacggg gctcggcgtg ctcgtctcgc acgatcgctt tttgctcgac gcgctcacga
      841 ccgcgacgct gcgggtgcac cgtcgcggcg tgacgctctg gcccggtcgc ttttccatgg
      901 ccaaagagct ctgggagcgc gcccgcgccg gagaagagac cgcccacggg gtcgcgcgcg
      961 aacgcgtgcg agcgctcgag gccgagctcg acgcggcacg gcgaacacaa ggggcagcgg
     1021 cgcgcaacgt gagcgcgcgt gctcgcatga agaaccgcaa cgacggcgac gcccgcggca
     1081 tcctcgcgac cacgaaagca caatgggcct ctgccaaagc gggtcgagtc acggcggcgg
     1141 ctcgcacgga gctcgaccgc gcacaaaaag ccgtccccgc catcgagcgc gacgtgacgc
     1201 tcggcggcaa gatcttcgcg gcctacgagc gcgcgcccgc tcaagtcctc tttcacctgc
     1261 acgaagacgc gctcacgcgc ggctctcacg tcgtgctccg cgacgtgcgg ctcacgctgg
     1321 ggcgcgaaga acgcgtgcgc atcgagggcc cgaacggcgc gggcaagacg accttgctcg
     1381 aagccctgct gcgctcgcac gcgcgcgccg agcggctctt gtatttaccg caagagctcg
     1441 gcgacgaggc gaaggcgacc gcgctcgctg cgctccgctc ggcgagctcc gaagcgcgcg
     1501 gtcgcgtgct ttcgattttt gccgcgctcg gtagcgagcc agagcgcgtg ctcggcgccg
     1561 acgcggctca cctgtcgccc ggtgaagcgc gcaagctcgt gctcgccgcc gccctgtcgc
     1621 ggcaggtgtg ggcgctcgtc atggacgaac cgacgaacca cctggatctg ccgagcatcg
     1681 aacggctcga agccgcgctc gcggcttatc cgggcgccat cgtgctcgtc acgcacgacg
     1741 aggcgttcgc agcgagcgtc acggcgcgct cgctccgcgt cgagggagga ctcgtcacgt
     1801 gaccgttgcc gctttcggaa gcagcaggtg cgattaggga cacgcgttcg ccggactcgt
     1861 gccgtcgccg cagtcgtcgc tgcagctcgg tgctccggct ggggaggcgc cgaagtagca
     1921 cgcgagcacc cactcgtgat cgggcccggc gcacgacttc tttctgactt gcatcccggc
     1981 cttcagcgcc gcgaagtccg ccgccgtgat ccgcacgtag tgcgcatggc cgagcgtcgt
     2041 gctcgaaagc gtagtgagct cctcccctgc ggccatttcg gcgggtgtga ccagcagcgt
     2101 gtgctggtgt tcgccagagc tcgtcacgat caggttgtcg ttgcagatgc cgcccgtgga
     2161 gcccgtcgaa cccgtggagc ccgtcgaacc cgtcgagccc gtcgagcccg tcgaacccgt
     2221 cgaacccgtc gaaccc
//
LOCUS       DATIML010001349         6511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2304086, whole genome shotgun sequence.
ACCESSION   DATIML010001349 DATIML010000000
VERSION     DATIML010001349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 6511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6511
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2304086"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VLJ38_23205"
     CDS             complement(<1..207)
                     /locus_tag="VLJ38_23205"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HSU42518.1"
                     /translation="MKAPYFSLQVQAAQPGRRVAARDVVECVLAGVRAGHLPGGGRLP
                     PVRVLERQLGLSKNTVQAAYDELVA"
     gene            complement(285..1679)
                     /locus_tag="VLJ38_23210"
     CDS             complement(285..1679)
                     /locus_tag="VLJ38_23210"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSU42519.1"
                     /translation="MARWIDRQEYVYTLAVALVALLPRLYVAIAWSREPVWDGHYYHL
                     GAERLAAGLGYSEDALVGGHVVWRPWVHYPVGYSFILSIFYRALGPSLLVAPILNALF
                     GSGVAAVVHRLGRYFTTSGRAKLAAALVALHPGLIAYSPLVMTEVLATLLLLVAGLVV
                     LTYRESIRGYLAAGVVLGVATLVRPESLLALPLLPFLGRRPYGRTFLRAIAATALAFV
                     VVLPWTLRNCEKLDGCALVSTNGGWNLAIGAITPTGRFHTLKASDGCPVVTGQVQQDD
                     CWRKVGEERILQNPWRWLGLVPKKLEQTYNHESYAVEYLHEADPSVWTEPRRVAGREF
                     LTFFHRLLLVAAALGAVSALHWVKPPPWDDAVQIGVGVVIMMFATFAAAREEHAFYWL
                     PALLPLVAILPLPGRPTLGPAGRYLLGLLAATTFTHCVFFGEDRYHLIVTPVLCLFAA
                     GALRPRRARAVLLA"
     gene            complement(1691..3271)
                     /locus_tag="VLJ38_23215"
     CDS             complement(1691..3271)
                     /locus_tag="VLJ38_23215"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSU42520.1"
                     /translation="MILSSAPPPPKETSTAPTGARHVIAVGGGRGGVGKSLLSLNMAV
                     YLAQLGRSVLLVDADSAGGTLHTLLGVEIPGVAAEEDTGEDSVPSIATPVPGLRLLPQ
                     TYRAGSTQPERAGKKAHWIADLRKLDVDYVVLDLGAGTAPATLDSFLSADVGVTITTP
                     EPPSVEAVYRFVRGLFQRTVRRSLVSDRFRLRLLERVQAELGPLPTPAELARALGRYD
                     SNLGQLAAAELARLRPRFVVNETRLRTDIELGPTMNEMARRYLGLELDYVGHVEHDDA
                     AWLSVLRRRPLLIDNTTSKSARNIERIARRLLALMVTRDAERVAEPIPLVPPEPNLYD
                     VLGVPRGATDEELRRAYKRQRENDQTGSLPLTSLLTTEALKREQAQVEEAHETLLDTL
                     RRKAYDASIFPDEPVPAPRPPVVDAALEAEREMLQRELAREINAETEFDGRLLAKVRE
                     SRGISLEDIARATKISLGHLRAIEADAFADLPALVYTRGFVQELAKYLKLDTAQVTKT
                     YVRRFREFLAAAEGETAS"
     gene            3399..4376
                     /locus_tag="VLJ38_23220"
     CDS             3399..4376
                     /locus_tag="VLJ38_23220"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSU42521.1"
                     /translation="MSPKALAVAGLLALTSSRLTTCRSPGEGGGDATQPQSQKTVEIK
                     GVDASALTARERTEWSDEVSHLLSPCPDQAVPLAQCVNENRPCRACAPAVRYLLEQVQ
                     RGKTRSQMESAYRERFAPDQVKNIDLGDTPSQGPADAPIVIVEFADFECPACGAMRPV
                     LEEVIGEHRDKIRFFFKHFPLGMHQNAEKAARAAVAAMKQGKFWEMHHVLFENQTALS
                     SENIEKLAQGIGLDMARFRQDRDSEATADFVAKNRKQGEALNLSGTPSIFIDGRKFGG
                     GGGEPKQDLEDWITLELELQGGPVTPKPAPSAAPSPSAAAPSGSAARSP"
     gene            4373..5116
                     /locus_tag="VLJ38_23225"
     CDS             4373..5116
                     /locus_tag="VLJ38_23225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012240180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HSU42522.1"
                     /translation="MRGGAESIGCFPTGRHYPGIAHLLRIVVAGLAEEFAGDTHLDEI
                     SFVAIDTETTGRDPEVDRAVEIACVIYRRGEVVARRSWLVNPGRPIPKESSDVHGIDD
                     EAVREAPPFAAIAAEVIETLAEGIPLAYNAEYDRKVLSAELARAGITPAVLPPALRRN
                     VEWIDPLIWARELQRAEKSRALSEVAQRLGIPLEHAHRATDDAEATLHVFSAFRRDPR
                     VPRTYGALIQEQRRLSRLFDEERKVWRRA"
     gene            5274..5972
                     /locus_tag="VLJ38_23230"
     CDS             5274..5972
                     /locus_tag="VLJ38_23230"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSU42523.1"
                     /translation="MQPTPISVFRSQPPPLWYVTNGELTVGPVATTLLARGVESGRVP
                     EYCHVRAARGTWRELVGVREIAALGTKPNAKAPTEEQFSEWARPIERVRDEAELCHTI
                     TWLALIATGAESAMFHYRGRYSNDLVTRSVLGPMPNDQLNMSLRPDDPVLSAARERRP
                     VVGPPYGPAEDALAMRFATSSGGVGAAAMIPIFVAGSLKGMLEISRPGHAFRRGDLVR
                     AERIAQRALLPRAN"
     gene            6040..>6511
                     /locus_tag="VLJ38_23235"
     CDS             6040..>6511
                     /locus_tag="VLJ38_23235"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSU42524.1"
                     /translation="MASLLRLYTDFVCPFCFIAEQSTVPRLLAEFELELDWCGFELHP
                     STPPGGVPLSRLFPNAPLPAMHERTKQFAASFGVTGFEPPDWLWNSRKALAIAEYARD
                     AGKLEPFRQIVMNAHWREGKSLERDEDLGAMAAGAGLDVQGALAASTDATLLARV"
BASE COUNT         1083 a         2215 c         2250 g          963 t
ORIGIN      
        1 cgccacgagc tcgtcgtacg ccgcctgcac cgtattcttc gacaaaccga gctggcgctc
       61 gagcacgcgc accggcggca agcggccgcc gcccggcagg tgcccggcgc gcactccggc
      121 gagcacgcac tcgacgacgt cgcgcgcggc cacgcgccgg ccgggctgcg ccgcctggac
      181 ctgcagacta aaatacggag ccttcacccg gagagcataa cggcaggtcg gcggcagcga
      241 agggacagcc gctctttgcc gcgtgggaca gcgtcagccg ccgctcaggc cagcagcacg
      301 gcgcgggcgc ggcgcggccg cagcgcgccc gcggcgaaca gacagaggac cggcgtcacg
      361 atcagatgat agcggtcttc accgaagaag acacaatgcg tgaaggtcgt cgcggcgagt
      421 agaccgagca agtagcgtcc cgcgggtccg agcgtaggac gacccggcag cggcaagatc
      481 gccacgagcg gaagcagcgc cggtaaccaa taaaacgcgt gctcctcgcg cgcggccgcg
      541 aacgtcgcga acatcatgat cacgacgccg accccgattt gcacggcgtc gtcccaaggt
      601 ggcggcttca cccaatgcag cgccgacacg gcgccgagcg ccgccgcgac cagcagcaag
      661 cgatgaaaga acgtcagaaa ctcgcgcccc gcgacgcgcc tcggctccgt ccaaacgctc
      721 ggatcggctt catgcaggta ctcgacggcg tacgattcgt gattgtaggt ctgctccagc
      781 tttttcggga cgagccctag ccagcgccac ggattttgca aaatccgctc ttccccgact
      841 ttgcgccagc agtcgtcttg ctgcacttgg ccggtgacga cggggcagcc atccgaggct
      901 ttgagggtgt gaaagcgtcc cgtcggtgtg atcgcgccga tcgcgaggtt ccagccgccg
      961 ttcgtcgaga cgagcgcgca cccgtcgagc ttctcgcagt tgcgaagcgt ccagggcagg
     1021 accacgacga acgcgagcgc cgtcgccgcg atcgcgcgca agaacgtgcg cccgtacggc
     1081 cgccgcccga ggaagggcaa gagcggcagg gcgagcagcg actccgggcg cacgagcgtc
     1141 gcgacgccga gcacgacgcc ggccgcgagg taaccgcgaa tgctctcgcg atacgtgagc
     1201 accacgaggc ccgccacgag cagcagcaac gtggcgagca cttcggtcat gacgagcggc
     1261 gagtacgcga tgagacccgg atgcagcgcg acgagtgccg ctgcgagctt cgcgcggccc
     1321 gaggtcgtga agtagcgccc gaggcggtgc accactgccg caacaccgga gccgaagaga
     1381 gcgttcaaaa tcggcgcgac cagcagtgac ggcccgagcg cgcggtagaa gatcgagaga
     1441 atgaagctat agccgaccgg gtagtgaacc caagggcgcc agacgacgtg tccgccgacg
     1501 agcgcgtcct ccgaatagcc gaggccggcg gcgagccgct cggcgccgag gtgatagtag
     1561 tggccgtccc acacgggctc gcggctccac gcgatcgcga cgtagagccg cggcaagagc
     1621 gcgacgagcg ccacggctag cgtgtagacg tattcctgcc ggtcgatcca cctggccacc
     1681 ggtctttcgc tcaagacgcc gtttcccctt cggccgcggc gagaaattca cggaagcggc
     1741 ggacgtaggt cttggtcacc tgcgccgtgt cgagcttcaa atatttggcg agctcttgca
     1801 cgaaaccgcg cgtgtagacg agcgcgggca agtctgcgaa cgcgtccgct tcgatcgcgc
     1861 gcaagtggcc gagcgagatc ttggtggcgc gggcgatgtc ctcgaggctg atgccgcggg
     1921 attcccgcac cttggcgagc aaacgtccgt cgaactccgt ctccgcgttg atttcgcgcg
     1981 cgagctcgcg ctgcagcatt tcgcgctcgg cttcgagcgc ggcgtcgacg acgggcgggc
     2041 gcggcgccgg cacgggctcg tcggggaaaa tcgaggcgtc gtaggctttg cggcgcaggg
     2101 tgtcgagcag cgtttcgtgc gcttcctcga cttgagcttg ttcgcgcttg agcgcctcgg
     2161 tcgtgagcag cgacgtgagc ggcaggctgc cggtctggtc attttcgcgc tggcgcttgt
     2221 aggcgcggcg gagctcttca tcggtcgcgc cgcgcggcac cccgagcacg tcgtagaggt
     2281 tcggctcggg cgggaccagc gggatcggtt cggccacgcg ctcggcatcg cgcgtcacca
     2341 tcagcgcgag caggcgccgc gcgatgcgct cgatgttgcg ggcgctcttg ctcgtcgtgt
     2401 tgtcgatgag cagcggccgg cgccggagca cgctgagcca cgcggcgtcg tcgtgctcga
     2461 cgtgcccgac gtagtcgagc tcgaggccga ggtagcggcg tgccatttcg ttcatcgtcg
     2521 gaccgagctc gatgtcggtg cgcaggcgcg tctcgttgac gacgaaacgc ggccgtaagc
     2581 gcgcgagctc cgccgcggcg agctggccta gattcgaatc gtagcggccg agggcgcgcg
     2641 cgagctcggc cggcgtcggc agcgggccga gctccgcctg cacgcgctcg agcagcctga
     2701 gtcgaaaacg gtcgctcacg agcgagcgac gtacggtgcg ctggaacaag ccgcgcacga
     2761 agcgatacac ggcctcgacg ctcggcggct cgggcgtcgt gatggtcacg ccgacatcgg
     2821 cgctcaagaa cgaatcgagc gtcgcaggcg ccgtgccggc tccgagatcg agcacgacgt
     2881 agtccacgtc gagctttcgc agatcggcga tccagtgcgc cttcttgccc gcgcgctccg
     2941 gctgcgtgga accggcgcgg tacgtctgag gcaacagccg caggccggga accggcgtcg
     3001 caatggaggg gacgctgtct tcgcccgtgt cttcttcggc ggcgacgccg gggatctcga
     3061 cacccaaaag ggtatgcagc gtgcctcccg cgctgtcggc gtcgacgagc agcaccgagc
     3121 ggccgagctg cgcgaggtac accgccatgt tgagcgacaa caggctcttg cccacgccac
     3181 cgcgcccgcc gccgacggcg atgacgtgac gggcacctgt cggcgccgtg gacgtttctt
     3241 tcgggggtgg aggcgccgag gacagaatca tccgactggc cgatcgaagc gggcccgtgt
     3301 gcggctcgtc ttggacgggc ccgttctact agctcaggtt aggccaggaa cgtacccctg
     3361 tgcgcggggc ccgccgagtg aggtaggctc ccccgccgat gagcccgaaa gccctagccg
     3421 tagccggcct cctcgcgctc acatcgagcc ggctcacgac ctgccgttcg ccgggtgagg
     3481 gcggcggcga cgcgacgcag ccgcaaagcc aaaagaccgt cgaaatcaaa ggcgtggatg
     3541 cgtcggcgct gaccgcgcgc gaacgcaccg agtggtcgga cgaggtctcg cacctgctct
     3601 cgccgtgtcc ggatcaggcg gtgccccttg ctcaatgcgt gaacgagaac cggccgtgcc
     3661 gcgcctgcgc gcccgcggtc cgctacctgc tcgagcaggt gcagcgcggc aagacacgca
     3721 gccagatgga gagcgcgtac cgcgagcgat tcgcgccgga tcaggtgaag aacatcgacc
     3781 tcggggacac gccgagccag gggcccgccg acgccccgat cgtgatcgtc gagtttgccg
     3841 acttcgaatg tcccgcttgc ggcgcgatgc gcccggtgct cgaagaagtc atcggcgagc
     3901 atcgcgacaa gatccgcttc ttcttcaagc acttcccgct cggaatgcat cagaacgccg
     3961 agaaggccgc gcgcgccgcg gtcgccgcga tgaagcaggg gaaattctgg gagatgcatc
     4021 atgtgctctt cgagaaccag acggcgctct cgagcgagaa catcgagaag ctcgcgcagg
     4081 gcatcgggct cgacatggcg cgctttcgtc aagatcgcga tagcgaagca acggcggact
     4141 tcgtcgccaa gaatcgcaag caaggtgagg cgctgaacct ctcgggcacg ccgagcatct
     4201 tcatcgacgg tcgcaagttc gggggcggcg gtggcgagcc taagcaagat ctcgaggatt
     4261 ggatcacgct cgagctcgag ctccagggtg gacctgtgac gccaaagccg gccccgagtg
     4321 cggctccgtc gccgagcgcg gccgctccga gcggctcggc ggctcgcagc ccatgagagg
     4381 tggcgccgag agcatcggct gcttccccac gggccgtcat tatcccggca tcgcgcacct
     4441 cttgcgcatc gtcgtcgcgg gcctcgcgga ggagttcgcc ggggacacgc acctcgacga
     4501 aatctcgttc gttgcgatcg ataccgaaac gaccggtcgc gatcccgaag tggatcgagc
     4561 ggtcgaaatc gcctgcgtga tctatcgtcg gggcgaggtc gtcgcgcgcc gctcgtggct
     4621 cgtgaacccc ggccgtccga ttccgaagga gtcgtccgac gtgcacggca tcgacgacga
     4681 agccgtgcgc gaggcgccgc cgttcgccgc gatcgccgcc gaggtcatcg agacgctcgc
     4741 cgagggcatt ccgctcgctt acaacgccga atacgaccgc aaggtgctgt cagccgagct
     4801 ggcccgcgcc ggcatcacgc ccgcggtgtt gccgccagcg ctccgccgca acgtcgagtg
     4861 gatcgatcca ctgatttggg cgcgcgagct gcagcgcgcc gagaagagcc gcgcgctctc
     4921 ggaagtcgcg cagcgactcg gcattccgct cgagcacgcc caccgcgcga ccgacgacgc
     4981 cgaggcgacg ctgcacgtct tctctgcgtt ccgccgcgac ccccgcgtgc cgcgcacgta
     5041 cggcgcgctg atccaggagc agcgccggct ctcgcgcttg ttcgacgaag agcgcaaggt
     5101 gtggcggcgc gcctgagacg ggcccgtcgc gcctggtcgc gagcggctcg ctcggcgcgt
     5161 cgaagccaca tcgataagtg agcgcgtcgc gcgggtggcg accgagcttt cggcgcgtgc
     5221 gcgagagttg gcccaagtgc gcatgagcga cgacaatccc tgtacccaca gccatgcagc
     5281 cgactcccat cagcgttttc cggtcgcaac ctcccccgct ctggtacgtg acgaacggtg
     5341 agctcaccgt aggtccggtg gcaacgactc tgctcgcacg cggcgtcgag tccgggcgcg
     5401 tgcccgagta ttgtcacgtg cgcgcggcgc gcgggacctg gcgcgagctc gtaggcgtcc
     5461 gggaaatcgc cgcgctcggc acgaaaccga acgccaaggc gccgaccgaa gagcagttca
     5521 gcgagtgggc gcggccgatc gaacgggtgc gtgacgaagc ggagctttgt cacacgatta
     5581 cgtggctcgc gctgatcgcg acgggcgccg agagcgcgat gtttcactat cgcggccgct
     5641 actcgaacga cctcgtcacg cgttcggtgc tcgggcccat gccgaacgat cagctcaaca
     5701 tgagcctgcg ccccgacgac ccggtgctca gcgcggcgcg cgaacgccgc cccgtcgtgg
     5761 ggcctccgta cggacccgcc gaggacgcgc tcgcgatgcg tttcgccacg agcagcggcg
     5821 gcgtcggtgc cgcggcgatg atcccgattt tcgtcgccgg ctccctcaag ggcatgctcg
     5881 aaatttcgcg acccggtcac gcgttccggc gcggcgacct cgtgcgcgcc gagcgcatcg
     5941 cgcaacgagc cctgcttcct cgcgctaact gagcggcggg cgactgcgac gatccgttcg
     6001 agcgccgcgc gggctcgagc ggcgtagtag ccttctggcg tggcctcgct cctccggctc
     6061 tacaccgatt tcgtttgccc gttttgcttc atcgccgagc agagcaccgt cccgcggttg
     6121 cttgccgagt tcgagctcga gctcgactgg tgtgggttcg agctccaccc gagcacaccg
     6181 ccggggggcg taccgctcag ccgtctgttt ccgaacgcgc ccttgcccgc catgcacgag
     6241 cgcaccaagc agttcgccgc gagcttcggc gtgaccggct tcgagcctcc ggattggctc
     6301 tggaacagcc gtaaggcgct ggccatcgcc gagtacgcgc gtgacgcggg taagctcgag
     6361 cccttccgcc aaatcgtgat gaacgcgcac tggcgcgagg gcaagagcct cgagcgcgac
     6421 gaagacctcg gcgcgatggc ggccggcgcc gggctcgacg tacagggcgc gctcgccgcg
     6481 tcgacggacg ctacgctgct cgcccgcgtc g
//
LOCUS       DATIML010001350         4576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1151736, whole genome shotgun sequence.
ACCESSION   DATIML010001350 DATIML010000000
VERSION     DATIML010001350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4576
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151736"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VLJ38_23240"
     CDS             <1..725
                     /locus_tag="VLJ38_23240"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSU42525.1"
                     /translation="LLAYDPAHYVGTELELFANATQWKSYFARSIARWVRGDVLEVGA
                     GIGANTHELHGPSVRSWLCLEPDATLAAQAKLALAPLATCEVVVGTTLDAKLGVYDSV
                     LYIDVLEHIEDDRAELERASALLRDGGHLVVLCPAHQSLYSELDRAVGHFRRYDAQSL
                     TACGPASLTLESAFYLDSVGMLASLANRALLKQGTPSLAQIKFWDRVMVPLSKLLDPC
                     VGRRLGKSVVAVWRRAGARGEG"
     gene            729..1682
                     /locus_tag="VLJ38_23245"
     CDS             729..1682
                     /locus_tag="VLJ38_23245"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol monophosphomannose synthase"
                     /protein_id="HSU42526.1"
                     /translation="MPAPSKVLVFTATYDEVENIGRLVPQVFAALPDCDMLVVDDASP
                     DGTGRLVDELMRTYPRLHVVHRPGKNGLGTAHKLAIKFALEQGYDALITMDADFSHHP
                     KYLPELARQLETAQFAIGSRFVAGGSCEYPLMRLALSYSANFLTRTLLGIPLHETTTA
                     YRGFRRSLLERMNIDAIRSDGYSFFVESIFQVTRLEAGDAGAMREFPIRFEDRQAGAT
                     KISKIEILNGMKTLGRLALTRAVGKSDPLPPVDTAADTEVCSLCGHGYRVEERAPASV
                     REVGRHLRASGSSPPPSERRVRCLGCGGVTVSALPEPALTP"
     gene            complement(1672..2283)
                     /locus_tag="VLJ38_23250"
     CDS             complement(1672..2283)
                     /locus_tag="VLJ38_23250"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSU42527.1"
                     /translation="MTRTTSFGEGYRTTWVDHFGVWLSGRQIRRFVPTFSGKVVADLG
                     CGHHAAFSRTIVGEVERLVLVDVSLAPDLKAMPKVQAIEGGLPGSLGELANQSVDVVM
                     IVSVLEHLWEPERTLSEIRRVLRPRGTCLVNVPSWLGKRYLELSAFKLGLSPADEMDD
                     HKTYYDVKDLWPLLVRAGFKPSEITCFSHKGGLNTFAACRLKG"
     gene            complement(2291..3526)
                     /locus_tag="VLJ38_23255"
     CDS             complement(2291..3526)
                     /locus_tag="VLJ38_23255"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSU42528.1"
                     /translation="MTALVPQRGGPAPHDPEISLALPTSDVEDPEFSIVIPALNEELT
                     ISDFVAWCHEGMQKAGVRGEILIVDSGKDRTMELALAGGARVLKTPKRGLGRAYQDAL
                     PFIRGKYVLMGDCDCTYDFRELAPFVEKFHGGAEFVMGSRFRGYIEPGSMPPLHRYLG
                     TPVTTWILNVIFSSHFSDIHCGMRGISKDALARMDIRSQSWEYASEMVLKSVHMRLRT
                     EEVPIRFLKDREGRLSHHKRSGWFSPWHAAWINLRAMFVYGADFFLFKPGLLLLAVGS
                     LLALPLSFGPITLGPVQLSLHWMLLGMSLALLGLQCIYMGILSKVFFDYTGDETAKWF
                     RRFSYTRTVLLSGAVFALGFLCAAVLLHFYFQMGLRLPEDAPANYLGFTGLMLMIAGF
                     MSFTFTLILHATAVAVRKR"
     gene            complement(3532..4530)
                     /locus_tag="VLJ38_23260"
     CDS             complement(3532..4530)
                     /locus_tag="VLJ38_23260"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSU42529.1"
                     /translation="MDGTWKNTLAGTHFFIVGGAGFIGSHFTDFLLGAGKADAVTLYD
                     NFSSGREWHYEAHRSDSRLNVVRGNVEDTAALRRAMEGHDVVIHLASNPDIARAATEP
                     DIDFWQGTVLTNSVVEAMRTTTAKRILYASGSGVYGDLGTLEIAETQGSLLPISTYGA
                     SKLAGEALIASYSYMFGLSGCAFRFGNVVGPRQTHGVGFDFARRLLADPSELKILGDG
                     TQSKSYVHVSDIVRAVLLAYERTQQRYEVYNVGTGDEITVREIAELAVECVGLPPGSV
                     RFAYTGGDRGWKGDVPVVRLKNERIRALGFTPKHNSREALGAAMRAMIPDMQAGRM"
BASE COUNT          819 a         1497 c         1518 g          742 t
ORIGIN      
        1 cgcttctggc ttacgatccc gctcactacg tcggcacgga gctcgagctc ttcgccaatg
       61 caactcagtg gaagagttac ttcgcgcgca gtattgcgcg ctgggtgcgc ggcgacgtgc
      121 tcgaggtggg cgcgggtatc ggggccaaca cccacgagct gcacggaccg agcgtccgca
      181 gctggctctg cctcgagccg gacgccacgc tcgccgccca agcgaagctt gcgctcgccc
      241 cgctagcgac atgcgaggtc gtcgtcggca ccacgctcga cgcgaagctc ggcgtctacg
      301 acagcgtgct ctacatcgac gtgctcgagc acatcgaaga cgaccgcgcg gagctcgagc
      361 gcgcgtccgc tctgctccgc gacggcggcc acctcgtcgt gctttgccct gcgcatcagt
      421 cgctctacag cgagctcgat cgcgcggtgg gccatttccg gcgctacgac gcgcagagcc
      481 tcacggcctg cggcccggcg agcctcacgc tcgagagcgc gttttacctc gactccgtgg
      541 gcatgctcgc ttctctcgcg aatcgcgcgc tcttgaagca gggcacgccg agcctcgcgc
      601 aaatcaagtt ctgggatcgg gtgatggtcc cgctatccaa gctgctcgat ccgtgcgtgg
      661 gccgtcgcct cggcaagtcg gtcgtcgccg tctggcgtag agcgggcgcg cgcggggagg
      721 gctagcactt gcccgctccg agcaaggtcc tcgtctttac ggcaacgtac gacgaagtcg
      781 aaaatatcgg acgtctcgta ccccaggtgt tcgcagcgct ccccgactgc gacatgctcg
      841 tcgtcgacga cgcttcgccc gacggcacgg gccgcctcgt cgacgagctg atgcggacct
      901 atccgcgcct gcatgtcgtg catcgaccgg gcaaaaacgg actaggcacg gcgcacaagc
      961 tcgcgatcaa gttcgcgctc gagcagggct atgacgcgct gatcacgatg gacgcggatt
     1021 tctcgcatca tccgaaatac ctgccggagc tggcgcgcca gctcgaaacg gcacagttcg
     1081 cgatcggctc gcgcttcgtc gcggggggca gctgcgaata ccctttgatg cgcctcgcgc
     1141 tgagctactc ggcgaacttc ctcacgcgca cgctgctcgg catcccgctc cacgaaacga
     1201 ccacggcgta ccgcggcttt cgccggtccc tgctcgagcg catgaacatc gacgccattc
     1261 gctccgacgg ctactcgttc ttcgtcgaat ccattttcca ggtgacgcgt ctcgaagcag
     1321 gcgacgccgg cgccatgcgc gaattcccca tccgcttcga ggatcgccag gccggcgcca
     1381 ccaagatttc gaagatcgag atcctgaacg gtatgaagac gctcggccgg cttgccctga
     1441 cgcgtgccgt cggcaaaagt gatccgctgc cgccggtcga caccgctgcc gacaccgagg
     1501 tctgcagcct gtgcggccac ggctaccgcg tcgaggagcg cgcgccggcc agcgttcgcg
     1561 aagtcgggcg gcacttgcgc gcgagcggct cgtcgccgcc accgagcgaa cgtcgcgtgc
     1621 gctgcctcgg ctgcgggggc gtcaccgtga gcgccctgcc cgagcccgcg ctcacccctt
     1681 gagccggcac gccgcgaagg tgttgagccc gcctttgtgc gaaaaacacg tgatttcgct
     1741 gggcttgaag ccggcgcgca cgagcagcgg ccagagatcc ttcacgtcgt aatacgtctt
     1801 gtggtcgtcc atctcgtcgg cgggtgagag cccgagtttg aacgccgaaa gctcgaggta
     1861 gcgcttgccg agccaggacg ggacgttcac gaggcacgtg ccgcgcggac gcaggacgcg
     1921 gcggatctcg ctcagcgtgc gctcgggctc ccacagatgc tcgagcaccg aaacgatcat
     1981 cacgacatcg acgctctggt tcgcgagctc gccgagcgag cccggcagcc caccctcgat
     2041 cgcttgcacc ttcggcatcg ctttgaggtc gggcgcgagc gacacgtcga cgagcacgag
     2101 gcgttcgact tcccccacga tggtgcggga gaacgccgca tgatggccgc agccgagatc
     2161 ggccacgacc ttgccgctaa atgtcggcac gaagcgccgg atttgccggc cggagagcca
     2221 cacgccgaag tgatcgaccc aagtcgtgcg gtagccctca ccgaacgagg tggtgcgcgt
     2281 catggctggc tcagcgcttg cgcacggcga ccgccgtggc gtgcaaaatc agcgtgaagg
     2341 tgaaggacat gaaaccggcg atcatcaaca tcagcccggt gaagccaagg taattcgcgg
     2401 gcgcgtcttc gggcaaacgc agccccatct ggaaatagaa atggagcagg accgccgcgc
     2461 acaggaagcc gagcgcgaaa acggcgccgc tcaagagaac cgtgcgcgtg tagctgaaac
     2521 ggcgaaacca cttcgccgtt tcgtcgcccg tgtagtcgaa gaacaccttc gacaggatgc
     2581 ccatgtaaat gcattgcagg ccgagcagcg cgagtgacat gccgagcagc atccaatgca
     2641 gcgagagctg cacggggccg agcgtgatcg gaccgaacga gagcggcagc gcgagcagcg
     2701 agccgacggc gagcaacaag agacccggct tgaacaggaa gaagtcggcg ccgtaaacga
     2761 acatggcgcg caggttgatc caggcggcgt gccagggcga aaaccagccg gagcgtttgt
     2821 ggtggctcag gcgtccctcg cgatccttga gaaagcgaat cggcacctct tccgtgcgca
     2881 agcgcatgtg cacggacttg agcaccatct cggaggcgta ctcccaggat tgggagcgga
     2941 tatccatgcg ggcgagcgcg tctttgctga tgccgcgcat gccgcagtga atgtcggaga
     3001 agtggctcga gaagatgacg ttcaggatcc acgtcgtgac gggggtgccg aggtaacgat
     3061 gcaggggcgg catcgacccg ggctcgatgt agccgcgaaa gcgcgagccc atcacgaact
     3121 cggcgccgcc gtggaacttc tcgacgaagg gcgcgagctc gcgaaagtcg taggtgcaat
     3181 cgcaatcgcc catgagcacg tacttgccgc ggatgaacgg caaagcgtct tgatacgcgc
     3241 gcccgagacc acgcttcggc gtcttcagca cgcgcgcgcc gcccgcgagc gcaagctcca
     3301 tggtgcggtc cttgccgctg tctacgatga ggatctcgcc gcgcacgccc gccttctgca
     3361 tgccctcgtg gcaccaggcg acgaaatccg aaatcgtgag ctcctcgttg agcgcgggga
     3421 tcacaatgga aaattcggga tcttcgacgt cgctcgtggg gagcgcgagc gagatttccg
     3481 ggtcgtgcgg cgcggggccg cctctctgtg ggacgagcgc ggtcacggcg gctacatcct
     3541 gccggcttgc atgtcgggaa tcatcgcgcg catcgccgcg ccgagcgctt cgcgcgagtt
     3601 gtgcttgggc gtaaagccga gcgcccggat gcgctcgttc ttgagccgca cgaccggcac
     3661 gtcgcctttc caaccgcgat cgccgccggt gtacgcgaag cgcaccgagc ccggcggcaa
     3721 gccgacgcac tcgacggcga gctcggcgat ctcgcgcacc gtgatctcgt cgccggtgcc
     3781 gacgttgtac acctcgtagc gttgctgcgt gcgctcgtag gcgagcagca cggcgcgcac
     3841 gatgtcggag acgtggacgt acgatttgct ctgcgtgccg tcgccgagga tcttgagctc
     3901 gctcggatcg gcgagcaggc gacgcgcaaa atcgaagccg acgccgtgcg tctggcgcgg
     3961 cccgacgacg ttgccgaagc ggaacgcgca gccggaaagg ccgaacatgt acgagtagct
     4021 cgcgatcagc gcctcaccgg cgagcttgct cgcgccgtag gtcgagatcg gcaagagcga
     4081 gccttgcgtc tcggcgatct cgagcgtgcc gaggtcgccg tacacgccgc tgcccgaagc
     4141 gtagaggatg cgcttggccg tggtcgtgcg catcgcttcc acgacggagt tggtgagcac
     4201 ggtgccctgc caaaagtcga tgtcgggctc ggtcgccgcg cgggcgatgt cggggttgga
     4261 cgcgaggtga atcacgacgt cgtgaccctc catggcgcgc cggagggcgg ccgtgtcctc
     4321 gacgttgccg cgcacgacgt tcaaacgcga gtcggagcgg tgcgcctcgt agtgccactc
     4381 ccggccggac gagaagttgt cgtaaagcgt gaccgcgtcg gccttaccgg caccgagcag
     4441 aaagtcggtg aagtgcgagc cgatgaagcc cgcgccgccg acgatgaaga agtgcgtgcc
     4501 ggcgagcgta tttttccaag tgccgtccat gagaagccgc ggggactcta cttcagttca
     4561 gttcacttca cggatt
//
LOCUS       DATIML010001351         2957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1442585, whole genome shotgun sequence.
ACCESSION   DATIML010001351 DATIML010000000
VERSION     DATIML010001351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1442585"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1387)
                     /locus_tag="VLJ38_23265"
     CDS             complement(<1..1387)
                     /locus_tag="VLJ38_23265"
                     /inference="COORDINATES: protein motif:HMM:NF039677.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6178 family protein"
                     /protein_id="HSU42530.1"
                     /translation="MATLERYRAPSATHLLAHVLENPALVAAVRELPPALLGKLIDAI
                     GLESAGELVALATTSQLERVFDEDLWREEAVGEDPRFDPARFALWLEILFEAGESAVV
                     SRLSELPLDFVILAVARLLLVIDIDRLGLELSDDEDELELIEKALDSNLCEEWEEFRL
                     IARDQRAFDTLVTALFALDREHHDLLRKILERCAASSGEYIEDNGGLYAVLTSDEMLE
                     NDARAERDDRRAAEGYVASSDARSLLALARQSPGVPGERDPVTRAYFRELDRERQAQV
                     TPRSAGRRAAHRQTATPKPDVARLVKLLADVTGTAAAPVTALVPSSSGPLLGRALAEL
                     RAEDPTLHAERLEELSFLANVLIAGEPNVGPSFSSHRSARSGARRLRRSTRDRARRAR
                     RLERRAAARGRDALALASPRRALPARVVRAPHACQEALTLQRAETRACQQRPRHIRVA
                     QGSDRDRGLVST"
     gene            1693..>2957
                     /locus_tag="VLJ38_23270"
     CDS             1693..>2957
                     /locus_tag="VLJ38_23270"
                     /inference="COORDINATES: protein motif:HMM:NF013507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HSU42531.1"
                     /translation="MTSVAGSTPRVVRALASCAAIVCALAACSSSSHDGSPLHRGAGG
                     MFAAGAASGAANTTNGAGSGGSAGTSTDGPSSSGASNTGGSGANGVGGTSTAGSGTAG
                     TATTAAGRGAGGRAPSAGGGSSIGGAAAGTGTSTAGNGTGAQAGAGSHVSGTPTEKAL
                     AKLPAARQEHSVAALNGEIYVIGGYSGGSTQVTDSVIAYDPVKDSWRNVQKFPGPLNH
                     GNAGSLGGKIYVAGFYTGGTMSTATTQVFAYDPASDAWTEKTPLPANTERAAGCVAVD
                     SGFMYVIGGAHDGKSVDAAARYDPAADTWKELAPLPERREHCTAGAIGGTIYVAGGRV
                     DGITNFEPKTWAYDPSADAWTEKASLPTPRGGLAGAVLGSKLYVFGGEGNSAVTTGVF
                     PNIDVYDPATDQWATIAQMLVPRHGYGAAV"
BASE COUNT          488 a          973 c         1039 g          457 t
ORIGIN      
        1 tcgtgctcac gagcccgcgg tcacgatcgc tcccctgcgc cactcgaata tgtcgtggcc
       61 gttgctgaca cgctcgggtt tcagcgcgct gtagcgtcaa cgcttcttga cacgcgtgtg
      121 gcgctcgtac cacccgtgcc ggaagagctc gtcgaggtga cgcgagcgca agagcgtcac
      181 ggccgcgcgc agccgcgcgt cgttcgagcc gtcgggcgcg ccgagctcgg tcgcgagtgc
      241 ttcgtcgcag acgtcgagcg ccgcttcgag cgcttcgatg ggacgaaaac gacggcccga
      301 cgttgggttc acccgcgatg agcacgttgg cgaggaagct gagttcttcg agccgttcgg
      361 cgtggagtgt ggggtcttcc gcgcgtagct cggcgagcgc gcggccgagc agcggcccgc
      421 tgctggaggg cacgagggcg gtgacgggcg ccgccgccgt acccgtcacg tccgcgagca
      481 gcttgacgag gcgtgccacg tccggttttg gggtcgctgt ctgccggtga gctgcgcgcc
      541 gtccggctga gcgcggcgtg acctgagctt ggcgctcgcg gtcgagctcg cgaaaatacg
      601 cgcgcgtcac cggatcgcgc tcgcccggca caccgggcga ctgtcgcgcc agcgcgagca
      661 aactgcgcgc gtcgctggag gcgacgtagc cctcggccgc gcggcggtcg tcgcgttcgg
      721 cgcgtgcgtc gttctcgagc atttcgtcac tcgtgagcac cgcgtagagc ccgccgttgt
      781 cctcgatgta ttcgccgctg ctcgccgcgc agcgttcgag gatcttgcgc aagaggtcgt
      841 ggtgctcgcg atcgagcgcg aacagcgccg tgacgagcgt gtcgaaagcc cgctggtcgc
      901 gcgcgatcaa gcgaaattcc tcccactcct cgcacaagtt cgaatcgagc gccttctcga
      961 tgagctcgag ctcgtcttcg tcgtccgaaa gctcgagtcc gagccggtcg atatcgatga
     1021 cgagcaagag gcgcgcgacc gcgagaatca cgaagtcgag cggcagctcg gacaagcgtg
     1081 agacgacggc cgactcaccg gcttcgaaca ggatctcgag ccagagcgcg aagcgagccg
     1141 gatcgaagcg cgggtcctcg ccgacggctt cttcgcgcca gagatcttcg tcgaagacgc
     1201 gctcgagctg actcgtcgtg gcgagcgcga cgagctcgcc cgcgctttcg agtccgatgg
     1261 cgtcgatcag cttgccgagc agcgccggcg ggagctcgcg cacggctgcg acgagtgccg
     1321 gattttcgag aacgtgcgcg agcaggtgcg ttgcggaggg ggcgcggtag cgctcgagtg
     1381 tcgccatgcg gcaaatcctc gggatccgag cgcgaagagg gaagctagga atgcgcctga
     1441 ggttttggta cactcttcat cagggtcggg gagcgaggct tgcaagaatt tgcaacgcgc
     1501 gacagcgaat gcgccgggga cgctgatgcc cagacaatgg ctacgatatt tatcggtcac
     1561 gcttcggacg agatttgctc gtgcacggcg cgaatctcac ggcgtcgctg cagtgccggc
     1621 gagcgttgaa ttgcacggtt cgcggcggtg tcgtgcgctg tgcgttcgtg aatggagtgg
     1681 tatgttgcgt gcgtgacgag cgtcgctggt tcgactccgc gcgtcgtacg cgcactcgcg
     1741 tcgtgcgctg ccatcgtgtg cgcgctcgcc gcctgctcga gctcgagtca cgacgggtca
     1801 ccgttgcacc ggggcgccgg tggaatgttc gcggcgggcg ccgcgagcgg cgccgccaac
     1861 acgacgaacg gcgccggatc tggcggcagc gccggcacgt cgactgacgg cccctcgagc
     1921 agtggcgcgt cgaataccgg cggcagcggt gcaaacggcg tcggaggcac gtcgacggca
     1981 ggcagcggaa cggccggcac cgcgacgacc gcagcgggca gaggagccgg cgggcgcgct
     2041 ccgtcggcag gcgggggcag ctcaatcggc ggcgccgcgg ccggcaccgg cacatcgacg
     2101 gccggcaacg gcacgggcgc gcaagccggc gccggtagcc acgtgagcgg cactcccacc
     2161 gaaaaagccc tcgcaaaact tcccgccgcc cgccaagaac actctgtcgc cgcgctcaac
     2221 ggcgaaatct acgtgatcgg cggctactca ggcggctcga cgcaagtgac cgattccgtc
     2281 atcgcctacg atcccgtgaa ggacagctgg cgcaacgtac aaaaattccc gggtccgctc
     2341 aaccacggca acgcgggttc gctcggcggc aaaatctacg tcgccggctt ctacacgggc
     2401 ggcacgatgt cgactgcgac gacacaagtg ttcgcttacg accctgcgag cgacgcttgg
     2461 acggaaaaga caccgctgcc cgctaacacc gaacgcgcgg cgggctgcgt cgccgtggac
     2521 tcgggcttca tgtacgtgat tggcggcgcc cacgacggca agagcgtcga cgctgcggcc
     2581 cgctacgatc cggcggcgga cacctggaaa gagctcgccc cactgccgga acgccgcgaa
     2641 cactgcacgg ccggcgcgat cggcggcacc atttacgtcg cgggcggccg cgttgacggc
     2701 atcacgaact tcgaaccgaa gacttgggcg tacgatccct cggcggacgc gtggacggaa
     2761 aaagcgtcac tcccgacgcc gcgcggcggt ctcgcgggcg ccgtactcgg gagcaaactt
     2821 tacgtcttcg gcggcgaggg caactcggcc gtcacgaccg gcgtcttccc gaacatcgac
     2881 gtttacgatc cggcgacgga ccagtgggcc accatcgcgc agatgctcgt gccacgtcac
     2941 ggctacggcg cggccgt
//
LOCUS       DATIML010001352         4782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2304480, whole genome shotgun sequence.
ACCESSION   DATIML010001352 DATIML010000000
VERSION     DATIML010001352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4782
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2304480"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /gene="pilM"
                     /locus_tag="VLJ38_23275"
     CDS             complement(<1..195)
                     /gene="pilM"
                     /locus_tag="VLJ38_23275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HSU42532.1"
                     /translation="MGEGRNLVGVDIGASGVKVCQVKESRRGLGLMRLGFVPLGAQAI
                     VDGQVMDQAAVIDALQRAFSE"
     gene            547..1347
                     /locus_tag="VLJ38_23280"
     CDS             547..1347
                     /locus_tag="VLJ38_23280"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSU42533.1"
                     /translation="MSDATYESVWPDPPTNSWRSPVSLSGQTWRTSVPPEERRRSVAP
                     VLRGARRPHVSQPAAVVKRPVNAPAKRERTDPAVARLIAEYTPLVHKIVGGFQRRLPR
                     NVLREDLIAAGMAGLWDAIRRHGDKQDEGFEWYVRVRVRGAILDELRAQDWLSRRARR
                     AAAAMGDSMPPRVVRLDDVGEWEQNRCLATLPEAETELNEQIVREHLVKAVETLPERE
                     RLIVSEHYFNHVKFKSLGERLGVSEPRISQLHSRAMQRLRTAVKEQDA"
     gene            complement(1409..1918)
                     /locus_tag="VLJ38_23285"
     CDS             complement(1409..1918)
                     /locus_tag="VLJ38_23285"
                     /inference="COORDINATES: protein motif:HMM:NF025070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HSU42534.1"
                     /translation="MSVERAEVTQEIRRLAAEAGVELFRAYGVELELAPDGWVETDAL
                     LLSGVMGFVEEHLSGTCVLAAPRDALMATAPADARPRDWVGELTNQLVGRLKAKLMAH
                     GLTVAVSTPVVLAGIKLSPLPRGDAEPSVYASKNGRVLIWLEVEVDPTFVWGEPEAGL
                     AHEGDLLVF"
     gene            complement(2014..3345)
                     /locus_tag="VLJ38_23290"
     CDS             complement(2014..3345)
                     /locus_tag="VLJ38_23290"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HSU42535.1"
                     /translation="MNAPSSQRAPEANDRPVPSTRVSTVERYDFFRVIQGYLDEAARI
                     VNVPDHVRVILREPKNELIVHFPVRMDSGEYRLFKGYRIQHSNILGPYKGGMRYHEHA
                     SLDDFKALGAMMTWKCALMNLPFGGAKGGIKFDPRSVSRDELSRITRRFFHALGSNIG
                     PDYDVPAPDVGTNAQTMAWAMDTYLNTVGMVKKEAAMGVVTGKPVSSGGTVGRETATG
                     QGVVHCIAEWARRSRFKLEGKKLIVQGFGNVGSNTAVLLASHGVSLVAVGDHTGYLYN
                     PEGFNVHRLKQYVAQNGSIAGYANGQKINREEFFGVQADIFVPAALENQIGAPEAEAL
                     QVSLVAEGANGPCSPEGEAVLARRGIELLPDVLANAGGVTVSYYEWVQNRRSEIWGIE
                     EVEERLEKAMLDAYDRMTQFATTHNCPNRIACYGVALQRLVQVYLDREIFP"
     gene            complement(3365..4186)
                     /locus_tag="VLJ38_23295"
     CDS             complement(3365..4186)
                     /locus_tag="VLJ38_23295"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020739346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HSU42536.1"
                     /translation="MPQSNLAVRLLTAGIAAPVLLLILFKGPAFAFSAVAIVASVLGA
                     QEVLRMTHPGDAVAQAIGVVQSTLVTAGIALFGDDPRVVIALLLGMPLLGMLMPLVRL
                     GDIATAGLRVMAGGAVPVYVGGSLGVLARLRAANADGAGWVLLVLMLGWLGDTGGYFF
                     GRFLGKRKLYPAVSPKKTVAGLVGAVVGALVGAVLASSWFLPRLLLAHAVVLGIVSGL
                     LGQAGDLTESLLKRSTGVKDSGAILPGHGGILDRIDAVLVLAPMVYLYTLFEFSR"
     gene            4226..>4782
                     /locus_tag="VLJ38_23300"
     CDS             4226..>4782
                     /locus_tag="VLJ38_23300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42537.1"
                     /translation="MRALRKRVLPRSGREPWRSHLRMRRRALAGGAILALAWAALSPR
                     PPERNLEGLRAWLGERVHGTVAAGDLAWEPQGGALSELVLGRGLWFLAANEPGGARDV
                     YRAWVRLTPNGQPLSVRRVLALTHTPDADESGLSVRDARVSFATLAGGRVTAVSVLEP
                     ARDGGMAPLERLVARETSGELTRLER"
BASE COUNT          840 a         1593 c         1600 g          749 t
ORIGIN      
        1 ctcggaaaag gcgcgctgga gcgcgtcgat gacggccgcc tggtccatca cctggccgtc
       61 aacgatggct tgggccccga gcgggacgaa gcccaagcgc atcaggccga gcccgcgacg
      121 ggactctttc acctggcaca ctttcacacc cgaggcgccg atatcgacgc cgaccaggtt
      181 ccttccttcg cccatggtcc gctaacgctc agatctcgcg gaaaaaccgc gtcttcgaac
      241 tctggcatcc ccccagcccg agagccaaga aaggcgcgga gacgggagca ctgacaccca
      301 caaagttgcg ggtctggctc gaccctaggg ggtcgcgggt gaccctctta actctcaaaa
      361 gtctcaaatc gatgctttcc ctaggaactt cggtctcatc gagcgcggca gaatgagaat
      421 tttgaaaaat gcctgggtca gcgctgaccc gaaacaagat gaaagaaaaa tgtaatcaat
      481 tgaatttgca gggttaaaaa acatggaacg gaagctgctc tagctgtctc tcgaggagaa
      541 cagcgaatga gcgacgccac ttacgagtcc gtttggcccg acccccccac gaattcttgg
      601 cggtcgccgg tatcgctcag tggccagact tggcgcacga gtgttccgcc cgaggaacgc
      661 cgccggtcgg tcgctccggt gctgcgcggc gcgcgccgcc cgcacgtctc ccaacccgcg
      721 gcggtggtca agcgccccgt caatgcgccc gccaaacgcg agcgcaccga tcccgcggtc
      781 gcgcgtctca tcgccgagta cacgccgctc gtccacaaga tcgtcggcgg ctttcaacgc
      841 cgcctgccgc gtaacgtgct gcgcgaggat ttgatcgccg cgggcatggc cggtctctgg
      901 gacgcgattc gccgtcacgg cgacaagcag gacgaaggct tcgagtggta cgtgcgcgtc
      961 cgcgtgcgcg gcgcgatcct cgacgagctc cgcgcgcaag attggctctc gcgccgcgcg
     1021 cgccgtgccg cggccgcgat gggcgacagc atgccgccgc gcgtcgtgcg cctcgacgac
     1081 gtgggcgagt gggaacagaa ccgctgcctc gcgaccctgc ccgaagccga gaccgagctc
     1141 aacgagcaga tcgtgcgcga gcacctggtc aaggccgtcg agacgctgcc cgaacgcgag
     1201 cgcctgatcg tgtcggagca ctacttcaat cacgtcaaat tcaagagcct cggcgagcgg
     1261 ctcggcgtga gcgagccccg catttcccag cttcattcgc gcgcgatgca gcgcctgcgt
     1321 actgcggtca aggaacagga cgcgtgaact gaagggctcg ggacggcgtg gacgcacgtt
     1381 ttagtgccgc gccgtccgag gctgcaactc agaaaacgag taagtcacct tcgtgtgcga
     1441 gaccggcttc cggctcgccc cagacgaacg tgggatcgac ttcgacttcg agccaaatca
     1501 ggacgcggcc gttcttgctg gcgtaaacgc tcggctcggc gtcgccgcgc ggcagcggcg
     1561 agagcttgat acccgcgagc acgacgggcg tgctgactgc gaccgtgaga ccgtgcgcca
     1621 tcagcttggc tttgagtctg ccgacgagct ggttcgtgag ctcgccgacc cagtcacgcg
     1681 gccgcgcgtc ggcgggggcg gtcgccatca gcgcgtcgcg cggcgccgcg agcacgcacg
     1741 tccccgacag gtgctcctcg acgaacccca tgacgcccga gagcaacaat gcgtcggtct
     1801 cgacccagcc gtcgggtgcg agctcgagct cgaccccgta agcgcggaag agctcgaccc
     1861 ccgcctctgc cgccaatctc ctgatttcct gggtaacttc cgctcgctcg accgacatca
     1921 aaaaggcgcc tccgcgcgaa acctagttcc gcctggactc atacggcctc ctcggcccaa
     1981 ggctaagggc gcgacgcgag ctcgagcgtc ccgttacggg aagatctcgc gatcgagata
     2041 gacctgcacg agccgttgga gcgcgacccc gtagcaagcg atgcgattcg ggcagttgtg
     2101 agtggtcgcg aactgggtca tgcggtcgta cgcgtcgagc atcgcctttt cgagacgctc
     2161 ctcgacctct tcgatgcccc agatttcgct gcggcggttt tggacccact cgtagtagct
     2221 caccgtcacg ccgcccgcgt tcgcgagcac gtcgggcaac agctcgatac cgcggcgcgc
     2281 gagcacggct tcgccttcgg gcgagcacgg gccgttcgca ccctcggcga cgaggctgac
     2341 ctgcaaggcc tcggcctcgg gcgcgccgat ctgattttcg agcgcagcag gtacgaaaat
     2401 gtcggcctgc acgccgaaga actcttcgcg attgattttc tggccgttgg cgtagccggc
     2461 gatggagccg ttttgcgcga cgtactgctt caagcggtgc acgttgaagc cttcgggatt
     2521 gtagagataa cccgtgtgat cgccgaccgc gacgagcgaa acgccgtgcg aggcgaggag
     2581 caccgccgtg ttggagccga cgttgccgaa gccctgaacg atgagctttt tgccctcgag
     2641 cttgaagcgc gagcggcgcg cccattcggc gatgcagtgc acgacgcctt ggcccgtcgc
     2701 cgtctcgcgg ccgacggtgc cgccgctcga gacgggcttg ccggtgacga cgcccatggc
     2761 cgcttccttc ttcaccatgc cgacggtgtt caggtaggtg tccatcgccc acgccatggt
     2821 ctgcgcgttc gtgcccacgt cgggcgccgg cacgtcgtag tcggggccga tattcgagcc
     2881 gagcgcatgg aagaagcggc gcgtgatgcg cgagagctcg tcgcgcgaga cgctgcgcgg
     2941 gtcgaatttg atgccgccct tggccccgcc gaacggcaag ttcatgagcg cgcacttcca
     3001 cgtcatcatg gcgccgagcg ccttgaagtc gtcgagcgag gcgtgctcgt ggtagcgcat
     3061 cccacctttg tacggcccga ggatgttcga gtgctggatg cggtagccct tgaacagccg
     3121 atactcgccg ctgtccatcc gcacgggaaa gtggacgatg agctcgttct tcggctcgcg
     3181 caggatcacg cggacgtgat cgggcacgtt gacgatcctc gcggcttcgt cgagatagcc
     3241 ctgaatcacg cggaaaaagt cgtagcgctc gacggtgctg acgcgggtgg atggcacggg
     3301 acggtcgttc gcttcgggcg cgcgttggga agagggtgcg ttcatgggtg gagaacctgc
     3361 tcgatcaacg gctgaactcg aacagagtat agaggtagac catgggcgcg agcacgagca
     3421 cggcgtcgat gcggtcgaga atgccgccgt gaccgggcag aattgcgccg gaatctttca
     3481 ccccggtgga gcgtttcaac aaggactcgg tcaaatcacc ggcttgcccg agtaggcccg
     3541 aaacaatgcc cagcacgacg gcgtgcgcga gcaaaaggcg tggcaaaaac cagctcgacg
     3601 cgagcacggc gcccacgagg gcaccgacga ccgcgcccac gagccccgcg accgtctttt
     3661 tcgggctcac cgctgggtac aatttgcgct tgccgaggaa gcggccgaaa aagtagccac
     3721 cggtgtcgcc cagccagccg agcatcagca cgagcagcac ccagcccgcc ccgtcggcgt
     3781 tggccgcgcg caagcgcgcg agcacaccga gcgagccgcc gacgtaaacg ggcaccgcgc
     3841 cgcccgccat gacgcgtagg ccggcggtcg cgatgtcgcc gagccgcacg agcggcatca
     3901 gcatgccgag gagcggcatg ccgagcagga gggcgatgac gacacgaggg tcgtcgccga
     3961 agagcgcgat gccggccgtg acgagcgtgc tttgcacgac gccgatggcc tgggcgacgg
     4021 cgtccccagg atgcgtcatg cgcaagacct cttgcgcccc gagcaccgac gcgacgatgg
     4081 ccacggcgct gaacgcgaac gccggtccct tgaacaaaat caaaaggagg accggcgcgg
     4141 cgatgccagc cgtgaggagg cgaacagcaa ggttactctg cggcaagatg ggggccggga
     4201 ccttaccatg ctaggccgag gccccatgcg tgcgttgcgc aagcgcgtct tgcctcgctc
     4261 gggtcgtgag ccctggcgct cgcacttgcg tatgcgccgc cgcgcgctcg ccggcggcgc
     4321 aatcttggcg cttgcctggg ccgcgctgtc gccgcggccg cccgagcgga acctcgaagg
     4381 actgcgcgcg tggctgggtg aacgcgtgca cggcacggtc gcggcgggcg acctcgcgtg
     4441 ggagccgcag ggtggcgcgc tcagcgagct cgtgctcggg cgtgggctct ggtttctcgc
     4501 cgccaacgag ccgggcggcg cgcgcgacgt gtaccgcgcc tgggtgcgac tgacgccgaa
     4561 cggacagcca ctctcggtgc gccgcgtcct cgcgctcacg cacacgccgg acgccgacga
     4621 aagcgggctc agcgtccgcg acgcccgcgt ctcgttcgcc acgctcgcgg gcggccgcgt
     4681 gacggccgtg agcgtgctcg agcccgcgcg cgacgggggc atggcaccac tcgagcggct
     4741 cgtggcgcgc gagaccagtg gtgagctcac gcggctcgag cg
//
LOCUS       DATIML010001353         3492 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_1442800, whole genome shotgun sequence.
ACCESSION   DATIML010001353 DATIML010000000
VERSION     DATIML010001353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1442800"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VLJ38_23305"
     CDS             <1..540
                     /locus_tag="VLJ38_23305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42538.1"
                     /translation="AVRPAAAEETFPGVIQNTYGGTCAPQCTLCHNRPEGGPAHYNPS
                     VLDEPNYTHQDLGNNRGEGQFFANLIYVNQGLPNGESGLQAALKKLATQPCSTDTSKP
                     GNTKAPCDSDGDGVPDMKEFAQNGDPNIAHGDLCIGPTYGCGATITPLPRDSTANWRA
                     AAVLAALGLGIVVARRLQR"
     gene            complement(627..1514)
                     /locus_tag="VLJ38_23310"
     CDS             complement(627..1514)
                     /locus_tag="VLJ38_23310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42539.1"
                     /translation="MRTINPSLALASLVGFLAAASCTLITDVDRTKIPTDAGAEGGSP
                     GTGGTTATGGTSATGGTGGSTAGSPGEAGQSNAGAGGTTSTGGTTSTGGTTSTGGSAG
                     MTPVTEVCARATGILTIAQNTYFADGDTLTLNDGVNAAVVFEFDIDSAVADGHEPIAF
                     HAGLNQFELATLIKDAINHAHGSDALRIVATTPPVPTEPLGAAGGGGTDNGGSSAGGQ
                     AGQSGTVDLSQLAEVDLTNDLAGQRSNVPIKKTVGNQGFKTMGMTGGNAVACSSPASC
                     SNGDACASGTCGSDHLCQQ"
     gene            1606..2478
                     /locus_tag="VLJ38_23315"
     CDS             1606..2478
                     /locus_tag="VLJ38_23315"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HSU42540.1"
                     /translation="MRIHLLDGTYELFRAFYGAPSARGRDGVEVGAARVLYRSLAGWL
                     AAEAVTHAAVAFDTVIESFRNDLFAGYKTGEGIDPALWAQFPLAERVTRALGLVTWSM
                     IEFEADDALATFAARAGADPRVERVLIVTPDKDLAQCVQDTRVVGYDRHRKVVLDATG
                     VVAKFGVPPAAIPDYLALVGDSADGIPGVPRWGPKSAGTLLARYGDLTRIPADAAAWD
                     VRVRGADALAVSLREHLDQALLYRELATLRLDVPLAESVDDLALAGADRALVEALAVE
                     LEDPSVLDRVRYRA"
     gene            2491..3273
                     /locus_tag="VLJ38_23320"
     CDS             2491..3273
                     /locus_tag="VLJ38_23320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42541.1"
                     /translation="MRAWSISVMAWLGVGAWCGPVLAQYTPSAPAPAPSNSGGGTLST
                     GGLAPPPAVEAAPPPGTATPAATEAELARADREDSGRGLEFVWLNGEVGVTHVGLATF
                     HDKHLLDPADVKSKATGVVVGAGLGVRLIFVTLGARFRYAPLPDYKLWSLGLEGGLHL
                     PLGSLEPYATLDAGYVSLGSFSGSSSFAKVHGFDARLGLGLDYYLTNLFSVGVNVSAD
                     LLALQRTTSACPSATSGSDFYCGSGSSTGGAVSATAVGGLHF"
     gene            3300..>3492
                     /locus_tag="VLJ38_23325"
     CDS             3300..>3492
                     /locus_tag="VLJ38_23325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42542.1"
                     /translation="MRFVVAALPLLLGVLLFRRVRRRERLSRRLALWVAAFGALTAAA
                     AVYAERVVLGWTDLSFQVST"
BASE COUNT          475 a         1214 c         1214 g          589 t
ORIGIN      
        1 gcggttcggc ccgctgcagc cgaggagacg ttcccaggtg tgattcagaa tacctacggc
       61 ggcacgtgcg cgccccaatg cacgctctgc cacaaccgac ccgagggcgg gcccgcgcac
      121 tacaacccga gtgtgctcga cgaacccaat tacacgcatc aggatctggg taacaatcgc
      181 ggcgaaggcc aattcttcgc gaatctcatt tatgtgaacc aaggcctgcc taacggagaa
      241 tccgggctcc aggccgccct gaagaagctc gccacccagc cctgcagcac cgacacgagc
      301 aagccgggca acacgaaggc gccgtgcgat tccgacggcg acggtgtgcc ggacatgaaa
      361 gagttcgcgc aaaacggcga tccgaacatc gcgcacggcg acttgtgcat cggccccacc
      421 tacggttgcg gcgcgaccat cacgcccttg ccgcgcgact cgacggcgaa ttggcgagcg
      481 gcggcggtgc tcgcggcgct cggcctaggt atcgtggtcg cacgccgctt gcagcgatag
      541 cggagcactc ggcacgtgcg ccggcgatac gatcgagctc ggcgccgacg accgcttccc
      601 gtccgcgagt ccacgcgccg cggtagttac tgctgacaga ggtgatcgct gccgcacgtg
      661 ccgctcgcgc acgcgtcgcc gttgctgcag ctcgcaggcg aggagcacgc gacggcgttc
      721 ccgccggtca tgcccatcgt cttgaacccc tggttcccca cggtcttctt gatgggaacg
      781 ttgctacgtt gcccggccag atcgttcgtc aggtcaacct cggcgagttg gctcaggtca
      841 accgtgccgc tctggcctgc ttggccgccc gcagaagaac cgccgttgtc cgtgccgccg
      901 ccgcccgctg cgccgagggg ctccgtcggg accggtggcg tcgtggcgac gatgcgcagc
      961 gcgtcgctgc cgtgcgcgtg gttgatcgcg tccttgatca gcgtggcgag ctcgaactga
     1021 ttcaggccgg catggaaggc gatgggttcg tggccgtcgg cgactgcgga gtcgatgtcg
     1081 aactcgaaga cgaccgcggc gttcacgccg tcgttcagcg tgagggtgtc gccgtcggcg
     1141 aagtaggtgt tctgtgcgat ggtgaggatg ccggtcgctc gagcgcaaac ctcggtgacc
     1201 ggggtcatgc cggcgctgcc accggtgctc gtcgtgccac cggtgctcgt cgtcccgccg
     1261 gtgctcgtcg tgccacccgc gccggcgttg gactggcctg cctcgcccgg gctgccggcg
     1321 gtgctgccgc ctgtgccgcc ggtcgcgctc gtgccgcctg tcgcggtcgt gcccccggtg
     1381 ccgggcgagc cgccctcggc tcctgcatcc gtcgggatct tggtgcggtc gacgtcggtg
     1441 atgagcgtgc agctagccgc cgcgaggaag ccaacgagcg aagcgagtgc gagcgaggga
     1501 ttgatcgtac gcatggtagg gttctcggcc tgcgccccca gggggcagag agcggcctat
     1561 tctttcaaag agccgcccct gaacgcaagc accgacggcc gtctcatgcg gatccacctg
     1621 ctcgacggga cctacgagct tttccgggct ttctacgggg caccaagcgc tcgggggcgt
     1681 gatggcgtcg aggtaggtgc ggcacgggtc ctttatcgaa gtctcgccgg ctggcttgcc
     1741 gccgaagctg tcacgcacgc ggcagtcgcg ttcgatacgg tgatcgagtc gtttcgcaac
     1801 gacctcttcg ccggctacaa gaccggggag gggatcgacc cggcgctctg ggcgcaattc
     1861 ccgctcgccg aacgcgtgac gcgcgccctc ggtctcgtca cctggtcgat gatcgagttc
     1921 gaggccgacg acgcgctcgc tacgttcgcg gcacgcgccg gggccgatcc gcgcgtcgaa
     1981 cgggtgctga tcgtgacgcc cgacaaggat ctcgcgcaat gcgtgcagga cacgcgcgtc
     2041 gtcggctacg atcgccaccg taaggtcgtg ctggacgcga ccggcgtggt cgcgaagttc
     2101 ggcgtgccgc ccgcggcgat ccccgactac ctcgcgctcg tcggtgacag cgctgacggc
     2161 attcccggcg tgccgcgctg gggcccgaag tcggccggca cgctgctcgc gcgctacggc
     2221 gatctcacac gcatcccggc ggacgcggcc gcgtgggacg tgcgggtgcg cggcgccgac
     2281 gcgctcgccg tgtcactgcg cgagcacctc gaccaggcgc tcctttatcg ggagctcgcg
     2341 acgctgcggc tcgacgtgcc gcttgccgaa agcgtggacg accttgcgct cgcgggcgcc
     2401 gaccgcgcgc tcgtcgaggc gctggccgtc gagctcgagg acccgagcgt cctcgaccgc
     2461 gtgcgttatc gcgcctaagc tcggctgggc atgcgtgcat ggtcgatcag cgtcatggct
     2521 tggctcgggg taggtgcgtg gtgcggcccc gtgctcgctc aatacacgcc atctgctccg
     2581 gcgcccgcgc cgagtaacag cggcggcggg acgctctcga ccggcgggct cgcgccgcca
     2641 cccgccgtag aagcggcgcc gccgcccggc accgccacgc ccgccgccac cgaagcggag
     2701 ctcgcgcgcg ccgatcgcga agactcgggc cgcgggctcg agttcgtatg gctgaacggc
     2761 gaggtcggcg tcacgcacgt cgggctcgcg acgttccatg acaagcattt gctcgacccg
     2821 gccgacgtga aatcgaaagc gacgggcgtc gtcgtgggcg ccggcctcgg cgtgcggctg
     2881 atcttcgtca cgctcggcgc gcgcttccgc tatgcgccgc tgcccgatta caagctgtgg
     2941 tcgctcggct tggaaggcgg gctgcacctg ccgctcggtt cgctcgagcc gtacgcgacg
     3001 ctcgacgccg gctacgtctc gctcggttcg ttttccggtt cgagctcgtt cgccaaagtg
     3061 cacggcttcg acgcgcgcct cggcctcggc ctcgactact acctgacgaa cctgttctcg
     3121 gtcggcgtca acgtgagcgc cgacctcttg gccttgcagc gcacgaccag cgcctgcccg
     3181 agcgcgacga gcggctcgga tttctactgc ggttccggct cgagcaccgg cggtgccgtg
     3241 agcgcgacgg ccgtcggggg cctgcacttc tgacggcgct cgagcgctga ggcgttgaga
     3301 tgcgtttcgt cgtcgccgcg ctgccgctcc tgctcggcgt actcctgttt cgccgcgtgc
     3361 gcaggcgcga gcggctgtcg cgacgcctcg cgctctgggt cgcggcattc ggcgcgctca
     3421 cggccgcggc ggccgtctac gccgagcgcg tcgtgctcgg ctggacggat ttgtcctttc
     3481 aggtgagcac gg
//
LOCUS       DATIML010001354         2661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_2596327, whole genome shotgun sequence.
ACCESSION   DATIML010001354 DATIML010000000
VERSION     DATIML010001354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2596327"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1054
                     /locus_tag="VLJ38_23330"
     CDS             <1..1054
                     /locus_tag="VLJ38_23330"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU42543.1"
                     /translation="PARGLAMFFVEPLRGGRALAELSVKATPLLLIALGLSVAFRANV
                     WNIGAEGQFILGAVAGTGVAIRATPESGHGLVVLVLVAGALGGMLWAAIAAFLRDRFN
                     ANEILVSLMLVYVAEQILSYLVSGPWKDPHGYNFPESVTFLDAARVPRLVEGSRANIG
                     VLIALACVAGIWLLLSRTHAGFKLAVGGVAPLAARYAGFSARSALWTAFLLSGGLAGL
                     AGALEVAGPVAQLTTHVPVGYGFAAIIVAFVGRLQPVGAVFASVLMSMFYIGGELSQS
                     RLGSPQALTGVFQGLLLFALLACDTFVDYRVRRRRPRALAAPVPGSTHGDSPGLLRAS
                     ALEPRHVASAAPERLT"
     gene            1051..1977
                     /locus_tag="VLJ38_23335"
     CDS             1051..1977
                     /locus_tag="VLJ38_23335"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU42544.1"
                     /translation="MTVESLALLVAAAVNSGTPLAIAGLGLLVNERAGVLNLGAEGLM
                     LVGALAGFATAVHHQSDALALLAGAGAGAALAAFFGLLVVFLNTNQYATGLALSLFGA
                     GFSAFAGVPYTQESLGERAHFALPGLSRLPVLGPALFSFHPVIYLTLLLAAGLAWFFF
                     RSRAGLVVRAVGEAPDSARALGYDVRRIRFAAVLAGGALCGIAGAYVSVVYTPLWIEG
                     MIAGKGWIALALTTFATWRPARVLFGAYLFGGVTMLELHLQGEGVNVPVQLLTMLPYL
                     ATILVLVLIARNPSWIRANMPASLGKPFHPGG"
     gene            2056..>2661
                     /locus_tag="VLJ38_23340"
     CDS             2056..>2661
                     /locus_tag="VLJ38_23340"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HSU42545.1"
                     /translation="MSVSRRTFVHSLCFTLLPALGACSKSSTPEQSTNVATGSAAAAP
                     ASASAAPAKGPLKVAFAYVGPVGDAGWTFAHDRARKEVQAAFGDKIATSFVENVPEAA
                     DAERVIRDMIDQGNTLIFGTTFGYMEPMLRLAADAKNVKFEHATGYKTAPNLRTYDSR
                     TYEGAYLAGVVAGAVTKTGTLGVVASIPIPEVIRNIDSFTLG"
BASE COUNT          330 a          963 c          877 g          491 t
ORIGIN      
        1 tccggcgcgc gggctggcga tgttcttcgt cgagccgctg cgcggcggcc gcgcgttggc
       61 ggagctttcg gtcaaggcga cgccgctctt gctcatcgca ctcgggctct cggtcgcgtt
      121 tcgcgcgaac gtctggaaca tcggcgccga aggccagttc atcctcggcg ccgtcgcggg
      181 gacgggcgtg gcgatccggg cgacgcccga gagcggccac ggcctcgtcg tgctcgtgct
      241 cgtggcgggc gctctcggcg gcatgctgtg ggccgccatc gccgcgttct tgcgcgaccg
      301 cttcaacgcg aacgagatcc tcgtgagctt gatgctcgtc tacgtcgccg agcaaatcct
      361 gagctacctc gtgtccggtc cgtggaagga tccccacggc tacaacttcc ccgagagcgt
      421 cacgttcctc gacgccgcgc gtgtgccgcg cctcgtcgaa ggctcgcgcg cgaacatcgg
      481 cgtgctcatc gcgctcgcgt gcgtggccgg gatttggctg ctgctctcgc gcacgcacgc
      541 ggggttcaag ctggccgtcg ggggagttgc accgctcgca gcgcgctacg cggggttttc
      601 ggcgcggagc gcgctttgga cggcgttttt gctttcgggc ggcctggccg gactcgccgg
      661 tgcgctcgag gtcgcgggcc ccgtggcgca gctcacgacg cacgtgccgg tgggttacgg
      721 ctttgccgcg atcatcgtcg cgttcgtggg gcggctgcag ccggtggggg ccgtcttcgc
      781 ttcggtgctg atgagcatgt tctacatcgg gggcgagctg tcgcagtcac ggctcggctc
      841 gccgcaggcg ctcacgggcg tgtttcaggg tctactgctg ttcgcgctgc tcgcgtgcga
      901 cacgttcgtc gattaccggg tgcgacggcg gcggccgcgc gccctggccg cgccggtgcc
      961 gggctcgacg cacggcgact cacccggtct gttgcgcgcg tcggcgctcg agccgcgcca
     1021 tgttgcgagc gccgcgcccg aaaggctgac gtgacggtcg aatcactcgc actgctcgtg
     1081 gccgctgccg tcaattccgg cacgccgctc gccatcgccg ggctcgggtt gctcgtgaac
     1141 gaacgcgcgg gcgtcttgaa cctcggcgcc gagggcctga tgctcgtcgg cgccctcgcc
     1201 ggtttcgcga ccgccgtgca ccatcagagc gacgcgctcg cgctcctggc cggtgctggt
     1261 gccggggccg ccttggcggc ttttttcggc ttgctcgtcg tgttcctcaa caccaaccaa
     1321 tacgctacgg gtctggcgct gagtctcttc ggcgccggct tctccgcgtt cgcgggcgtc
     1381 ccctacaccc aggagagtct cggcgagcgc gcgcacttcg cgctcccagg cctgtcgcgg
     1441 ctacccgtgc tcggccccgc tctcttctcg ttccacccgg tcatctacct gacgctgctg
     1501 ctcgcggcag gacttgcgtg gttcttcttt cgctcgcgcg cgggactcgt cgtgcgcgcg
     1561 gtcggcgagg cgcccgactc ggcgcgcgcg ctcggctacg acgtgcggcg cattcgcttc
     1621 gccgccgtgc tcgcgggcgg cgccctgtgc ggcatcgcgg gcgcgtacgt ctccgtcgtc
     1681 tacacgccgc tctggatcga aggcatgatc gccggcaagg gctggatcgc gctggcgctc
     1741 acgacgtttg cgacctggcg cccggcgcgc gtgctcttcg gcgcctacct gttcggtggc
     1801 gtcaccatgc tcgagctgca cctgcagggg gaaggcgtga acgtgcccgt gcagctgctc
     1861 accatgcttc cgtacctggc caccatcctc gtgctcgtcc tgatcgcgag aaatccaagc
     1921 tggatccgcg ccaacatgcc cgcctcactc ggtaaaccct tccacccggg cggctgaact
     1981 caccgtgtgc cagcccgact gcgcgtcagc cggccgacca tgtctcgcct cgcttcaact
     2041 ccggagtcat cgacaatgtc agtttcccgc cgcaccttcg ttcattcgct ttgcttcacg
     2101 ttgctcccgg ccttgggcgc ctgcagcaag agctcgaccc ccgaacagtc cacgaacgtc
     2161 gccacgggct cggcggccgc ggctcccgcg agtgccagtg ccgctcccgc caagggcccg
     2221 ctcaaagtgg cattcgcgta cgtcggtccg gtcggcgacg cgggctggac gttcgcgcac
     2281 gatcgagcgc gcaaggaagt ccaagccgcc ttcggtgaca aaatcgccac ttccttcgtc
     2341 gaaaatgtcc ccgaggccgc cgacgccgaa cgcgtgatcc gcgacatgat cgaccagggc
     2401 aacacgctca tcttcggcac caccttcggc tacatggaac cgatgctgcg cctggccgcc
     2461 gacgcgaaga acgtcaaatt cgagcacgcg acgggctaca aaaccgcgcc caacctccgc
     2521 acctacgact cgcgcacgta cgagggcgcc tacctcgccg gcgtggtcgc gggcgccgtc
     2581 acgaagacgg gtacgctcgg cgtcgtcgcc tcgatcccga tccccgaagt cattcgcaac
     2641 atcgactcct tcacgctcgg g
//
LOCUS       DATIML010001355         2447 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4330016, whole genome shotgun sequence.
ACCESSION   DATIML010001355 DATIML010000000
VERSION     DATIML010001355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4330016"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..694
                     /locus_tag="VLJ38_23345"
     CDS             <1..694
                     /locus_tag="VLJ38_23345"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HSU42546.1"
                     /translation="LTRPAFDRWDGAAHAARPVFDIPFHRSKEPDLMFTLPPLPYAEN
                     ALEPVISANTLSFHYGKHHKAYVDNLNKLTSGTEYESMPLEQVIRGTAGKADKSGIFN
                     NAAQVWNHTFFWKCLRNGAGGKPGGRIAQMIDSDLGGYDNFRKEFANACVTQFGSGWG
                     WLVASGGKLSIMKTPNAENPLSKGQTALLTIDVWEHAYYLDYQNRRPDFVNAVIDKLL
                     NWDFATENLARA"
     gene            695..1930
                     /locus_tag="VLJ38_23350"
     CDS             695..1930
                     /locus_tag="VLJ38_23350"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSU42547.1"
                     /translation="MAIFGKPSTRKTRSAKPAEGDAKRDTKVMSARELAARAASGKGK
                     LPGLEPLGETSMRGASVINWSTAPKAIEVAQANPGLCAVLENAALLFANGQDEPARAL
                     LEQGVASDPDTKLSPLAWLALFDLTQRAGERAAFDRLAMQYVLQFERSAPSWDEAMKP
                     VAGEVAGGGGYIAITGKLSSRSASQLEGLKRALEKCVPRARVDLSSVSGFDDAGARLL
                     AADLARARSQRMELTIERPSRLRAALEEAVAKGREGGEGAWLLSLELMQWAHEQAEFD
                     ERAVEFAVAFELSPPSWEPPPGGGHGAVEPAATPVLAHAGAPDDAEFVVFDGVMTGPS
                     PMPLARLADFAAQNPIATIDMTGVERIDFVCAGALANAIGRVESQGKGVQIFGATPIV
                     RALLLLIGISPRHFVKKTG"
     gene            1942..>2447
                     /gene="hslV"
                     /locus_tag="VLJ38_23355"
     CDS             1942..>2447
                     /gene="hslV"
                     /locus_tag="VLJ38_23355"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013939585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HSU42548.1"
                     /translation="MPEVFHGTTILSVRRDAAVALGGDGQVTLGQVVIKSSARKVRRL
                     YHDKVIAGFAGATADAFTLFERFEAKLEKHQGQLTRAAVELAKDWRSDRVLRRLEAML
                     AIADRSASLVITGAGDVLEPEHGIVAIGSGGPYAQAAAKALLDNTSLPARAIVERALA
                     IAGEICIYT"
BASE COUNT          404 a          801 c          858 g          384 t
ORIGIN      
        1 actgacgcgt ccggcgttcg atcgctggga cggggccgcg catgcggccc gtcccgtttt
       61 tgacattccc tttcaccgat cgaaggagcc cgacctcatg ttcacgctgc ctcctcttcc
      121 gtacgccgag aacgcgctcg agcccgtcat ctcggccaac acgctttcgt ttcattacgg
      181 caagcatcac aaggcgtacg tcgacaacct gaacaagctc acgagcggaa ccgaatacga
      241 gtccatgccg ctcgagcagg tgattcgcgg cacggcgggc aaggcggaca agagcggcat
      301 cttcaacaac gccgcgcagg tgtggaacca cacgttcttc tggaagtgcc tgcgcaacgg
      361 cgcgggcggc aagcccggcg ggcgcatcgc gcagatgatc gacagcgatc tcggcggcta
      421 cgacaatttc cggaaggagt tcgccaacgc gtgtgtcacc cagttcggct cgggatgggg
      481 ctggctcgtg gcgagcggcg ggaagctctc gatcatgaag acgccgaacg ccgagaatcc
      541 gttgtcgaag gggcagaccg cgcttttgac gatcgatgtc tgggagcacg cgtactacct
      601 cgactaccag aaccggcgtc ccgatttcgt caacgccgtg atcgacaagc tgctgaactg
      661 ggatttcgcg acggaaaatc tcgcccgcgc gtaaatggcg atcttcggca agccctcgac
      721 caggaagacg cggtccgcga agccggccga gggtgacgcg aagcgcgaca cgaaggtgat
      781 gtcggcgcgc gagctcgctg cgcgcgcggc aagcgggaag ggcaagctgc ccggactcga
      841 gccgctcggc gaaacgagca tgcgcggtgc gagcgtcatc aactggtcga ccgcaccgaa
      901 ggcgatcgag gtcgcgcagg cgaacccggg cttgtgcgcg gtgctcgaga acgcggcgtt
      961 gctgttcgcg aacggacagg acgagccggc gcgtgcgctg ctcgagcagg gcgtggcgag
     1021 cgaccccgac acgaagctct cgccgctcgc atggcttgcg ctcttcgacc tgacgcagcg
     1081 cgcgggtgag cgcgccgcat tcgacaggct cgccatgcag tacgtgctgc agttcgagcg
     1141 ctccgcgccg tcgtgggacg aggcgatgaa gccggttgcg ggcgaagtgg cggggggcgg
     1201 gggctacatc gccattaccg ggaagctttc gagccgcagc gcctcgcagc tcgagggtct
     1261 caaacgcgcg ctcgagaaat gcgtgccgcg tgcacgcgtc gacctgtcgt cggtctccgg
     1321 tttcgacgac gcgggggcgc gcctgcttgc cgccgatctg gcgcgagcgc gaagccagcg
     1381 aatggagctc accatcgagc gtccttcgcg gctgcgtgcc gcgctcgagg aagccgttgc
     1441 gaagggtcgc gaaggcggcg aaggcgcctg gcttctgtcg ctcgagctga tgcagtgggc
     1501 gcacgagcag gccgagttcg acgagcgtgc ggtcgaattt gccgttgcgt tcgaattgtc
     1561 gccgccgtcg tgggagccgc cgccgggtgg cgggcacggc gcagtcgagc ccgcggcaac
     1621 gcctgtcctc gcgcacgccg gtgcgccgga cgatgccgag tttgtcgtgt tcgacggcgt
     1681 gatgaccggt ccctcgccca tgccgctggc gcggctcgcc gatttcgccg cgcagaaccc
     1741 gatcgccacg atcgacatga ccggtgtcga gcgcatcgat ttcgtctgtg ccggtgcgct
     1801 ggccaacgcg atcggccgcg tcgaaagcca gggcaagggc gtgcagatct tcggcgccac
     1861 gccgatcgtg cgcgcgctct tgctgctgat cggcatttcg ccgcgtcact tcgtcaagaa
     1921 gacgggctga tacgcgctgc catgcccgag gtctttcacg gaacgacgat cctgtcggtg
     1981 cgccgcgacg ccgccgtggc gctgggtggg gacggccagg tcacgctcgg ccaggtggtg
     2041 atcaagtcga gcgcacgcaa ggtgcgccgg ctgtaccacg acaaggtgat cgccgggttc
     2101 gccggcgcca ccgccgacgc gttcacgctg ttcgagcgct tcgaggccaa gctcgaaaag
     2161 catcagggcc agctcacgcg agcagcggtc gagctcgcga aggactggcg ctccgaccgc
     2221 gtgctgcgcc ggctcgaggc gatgctcgcg atcgccgatc gctcggcgtc gctcgtgatc
     2281 acgggcgcgg gcgacgtgct cgagcccgag cacggcatcg tggcgatcgg gtcgggcggc
     2341 ccgtacgcgc aggccgccgc gaaagccctg ctcgacaaca cgtcgctgcc ggcgcgcgcc
     2401 atcgtcgagc gcgcgctcgc catcgccggc gagatctgca tctacac
//
LOCUS       DATIML010001356         4908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3461128, whole genome shotgun sequence.
ACCESSION   DATIML010001356 DATIML010000000
VERSION     DATIML010001356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 4908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4908
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3461128"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..932
                     /locus_tag="VLJ38_23360"
     CDS             <1..932
                     /locus_tag="VLJ38_23360"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSU42549.1"
                     /translation="VLERDPGHRGALECVARLSASEGKLEQAASALDKLLATSNGAEA
                     VRLALSLADVEEQLGSKERAALALERGLVADERNADVRERLQKLYESTNAWDKLAGLI
                     ARDAELTTGADAQVKLLRQAARIQAERRGDHAAAAALLDRASQLKPDDRELLLALCDE
                     YNASGRGKAAAQVLEKIVQSYGAKRTKELAEIHRRLASAYLADGEGQRALDELDKAFR
                     IEPGNISVLALLGEVALNVGDLKKAQQMYRALLLQKLDDAGPIKKALVFVRLGDIHDR
                     LGEKPKAIQMYERALQTDATLGEAKTKLSALKA"
     gene            951..1802
                     /locus_tag="VLJ38_23365"
     CDS             951..1802
                     /locus_tag="VLJ38_23365"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSU42550.1"
                     /translation="MRSTVPYDPRVSRTPDQRFVGRLGREAIERYRRGRALLGTLGSA
                     VLAVRTPGVAAGRVIRRVLLMQIFYTGFEAVPLIGTVSVLLGATIVIQTELMVPAADS
                     ALIGKVMIAVVLRELAPLITAIVVAGRSGTAIATELGNMKVSSEILALTSLGIDPPRF
                     IVLPRLIAAVVSVLVLMVYFAATALAGTALMGVMIANIGFGAFQTALSGALTIYDLGL
                     FVVKGVGLGAIVGWLCCHYGLEVKSSPTEVPQMASRAVVRSLLGCVAYNTLATALFYW
                     TVGHALR"
     gene            1861..2550
                     /locus_tag="VLJ38_23370"
     CDS             1861..2550
                     /locus_tag="VLJ38_23370"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSU42551.1"
                     /translation="MQPGLVLENASFRYGTIWVLLETSLRVSPGETLLLTGENGVGKS
                     TLLYLLGGLLPATTGRVLLDGQAPSVTRPSELVRHGVRRGFVFQHGGLLANLTALDNV
                     LLALRYHADVLGLDDAGVAQRGREALRDLRVAQSDFHTLPAHLSFGVRQRVALARALA
                     LDPNYVFLDDPDQGLDETTRQIVLDLLVRLRDERRITLVLTTTDPEVVARLGVRVLEL
                     NQGRLTSLQRA"
     gene            complement(2565..3512)
                     /locus_tag="VLJ38_23375"
     CDS             complement(2565..3512)
                     /locus_tag="VLJ38_23375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42552.1"
                     /translation="MRRSSSLCLLATVLALVSGCGGRSDKHDAATDGGHGGSGASSGA
                     GGTTAGASAATGGSAATAGGTAGTGGAEGGTAGVTAGMGGSAPGTGGASAGSGGSPGG
                     SGGFTGGSGGEAGASIGRSCTDLVDDYSTAYEEAVQCDPGAPTDECTQKLQVGLACGC
                     DAFVNPAHPDAMMRMAEAQSAYEDRACRSGNVCGACLGPVRGRCSDAGRCEGVPPGSG
                     RSCKVAGVVYADGDHNIADPVSCNTCSCDDGNLACTEIGGCEQPCPDGYGFGTGCAQC
                     GPTDACEIPEYDCFRTCQDGCGEPGTLCISGLCIPGVCG"
     gene            3690..4529
                     /locus_tag="VLJ38_23380"
     CDS             3690..4529
                     /locus_tag="VLJ38_23380"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSU42553.1"
                     /translation="MPSRTPLGAVGLRVYNALYWPYLALTCVIFFVPALAIWALTLWD
                     PKKRLLHAFTSFWGAHYLAWAPFASVKVFNRDVGLRAGPCVYVSNHQSMVDILAVFAT
                     YLPYRWVSKRANFFAPFLGWTMWLNGYVPLKRGHLPSIRRMLRRCEAELRAGNSLFLF
                     PEGTRSDDGELKAFYRGAFWLALRHGVPVVPVVIEGTRHILPKRSLLIRPQEVHVRVL
                     PPVDAAAFGRDDRALREAVHERMSEGLAELRRSFKAVGLASTEAHASSRATPAKAGDP
                     RSA"
     gene            4526..>4908
                     /locus_tag="VLJ38_23385"
     CDS             4526..>4908
                     /locus_tag="VLJ38_23385"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237076.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The beta chain is a
                     regulatory subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HSU42554.1"
                     /translation="MSTQGKIIQVIGPVVDVEFPPGKLPTILNALTLTNPNISSEKDN
                     LVLEVAQHLGESVVRAIAMDTTEGLVRGMLVSDTGSPIMMPVGKATLGRILNVTGKPI
                     DEKGPVNAERRLPIHRPAPGFVDQNP"
BASE COUNT          752 a         1706 c         1635 g          815 t
ORIGIN      
        1 gcgtactcga gcgcgatccg ggccaccgcg gcgcgctcga gtgtgtcgcg cgactgtcgg
       61 cgagcgaagg caagctcgag caggcggcga gtgcgctcga caagttgctc gcgacgagca
      121 acggcgccga agccgtgcgg ctcgcgctct cgctcgccga cgtcgaggag cagctcggct
      181 cgaaggagcg ggcggcgctc gcgctcgagc gcggcctggt cgccgacgaa cgcaacgccg
      241 acgtgcgcga acggttgcag aagctctacg aaagcacgaa cgcctgggac aagctcgcgg
      301 ggctcatcgc gcgcgacgcc gagctcacga ccggcgccga cgcccaggtg aagctcctgc
      361 ggcaggccgc gcggatccag gccgaacgtc gcggggacca cgcggcggcg gcggcgctgc
      421 tcgatcgcgc gtcgcagctc aaacccgacg atcgcgagct cttgctcgcc ctctgcgacg
      481 aatacaacgc gtccggtcgc ggcaaagcgg cggcgcaggt gctcgagaaa atcgtgcaga
      541 gctacggcgc caagcgcacg aaggagctcg ccgagatcca ccgtcggctc gcgagcgcct
      601 acctcgcgga cggggagggc cagcgcgcgc tcgacgagct cgacaaagcc ttccgcatcg
      661 agccgggcaa catctcggtg ttggcgctgc tcggggaagt cgcgctcaat gtcggagacc
      721 tgaagaaggc gcagcagatg taccgcgcgc tgctgctgca gaagctcgac gacgcaggtc
      781 ccatcaaaaa ggcgctcgtc ttcgtgcggc tcggcgacat tcacgacagg ctcggtgaaa
      841 aaccgaaggc cattcagatg tacgagcgcg cgctccagac cgatgccacg ctcggcgagg
      901 ccaaaaccaa gctcagcgcg ctcaaggcat gatttcccgg gcgcgagcag atgcgctcga
      961 ccgtaccgta cgatccgcgc gtcagtagga cgcccgacca gcgcttcgtc gggcggctcg
     1021 gccgcgaggc gatcgaacgc taccggcgcg ggcgggcgct cctcggcacg ctcggatcgg
     1081 cggtgctcgc cgtgcgcacg ccgggcgtcg ccgccggccg cgtcatccgg cgtgtgctgc
     1141 tcatgcagat cttttacacg ggcttcgagg ccgtgccgct catcggtacg gtgagcgtct
     1201 tgctcggcgc gacgatcgtg atccagaccg agctcatggt gcccgcggcg gattcggcgc
     1261 tcatcggcaa ggtgatgatc gccgtcgtct tgcgcgagct cgcgccactc atcacggcga
     1321 tcgtggtcgc cggtcgttcg gggacggcga tcgcgaccga gctcggcaac atgaaggtca
     1381 gctccgagat cctcgcgctc acctcgctcg gcatcgatcc gccgcgcttc atcgtgctgc
     1441 cgcggctgat cgcggcggtc gtgagcgtgc tcgtgttgat ggtgtacttt gccgcgacgg
     1501 cgctcgcggg gacagcgctc atgggcgtga tgatcgccaa catcggcttc ggcgctttcc
     1561 aaaccgcgct ctcgggcgcg ctcacgattt acgacctcgg tctatttgtg gtgaagggcg
     1621 tggggctcgg cgcgatcgtc ggctggctgt gttgtcacta cggactcgag gtgaaaagct
     1681 cgcccaccga ggtcccgcag atggcgagcc gcgcagtcgt ccggagcctg ctcggttgcg
     1741 tggcgtacaa caccctcgcg acggccctct tctactggac cgtcgggcac gcgctgcgtt
     1801 agcggccgcg agcgcccaga gcacccggcg cgcggcgttt cgcgctaatt tgcccaggcc
     1861 ttgcaacccg gactcgtgct cgaaaacgcg tcgttccgct acgggacgat ctgggtgctg
     1921 ctcgagacga gcctgcgcgt ctctccgggc gagacgttgc tcttgaccgg tgaaaacggc
     1981 gtcggcaaat cgacgttgct ctacctgctg ggggggctcc tgccggcgac gaccggtcgc
     2041 gttttgctcg acggacaagc gccgagcgtg acccggccga gcgagctcgt gcgccacggt
     2101 gtccggcgcg gcttcgtgtt ccagcacggc ggcttgctcg cgaacctgac ggcgctcgac
     2161 aacgtactgc tcgccttacg ctatcacgcc gacgtgctcg gcctcgacga cgcgggggtc
     2221 gcgcagcgcg ggcgcgaagc gctgcgcgat ctacgcgtcg cgcagtcgga cttccacacc
     2281 ttgcccgcgc atctttcgtt cggcgtgcgg cagcgcgtcg cgctcgcacg tgctctcgcc
     2341 ctcgacccga actacgtctt cctcgacgat cccgatcagg gcctcgatga aacgacgcgc
     2401 caaatcgtgc tcgatctgct ggtgcggctg cgtgacgagc gccgcatcac gctcgtgctc
     2461 acgacgaccg atcccgaagt cgtcgcgcgg ctcggcgttc gcgtgctcga gctgaaccag
     2521 ggccggctca cgagtctgca gcgagcctga acgctcgatc ccgctcagcc gcagacgcca
     2581 gggatgcaca gcccgctgat gcaaagagtg ccgggctcgc cgcagccgtc ttggcacgtc
     2641 ctgaagcagt cgtactccgg gatttcgcac gcgtccgtgg ggccgcactg cgcgcagccg
     2701 gtgccgaagc catagccgtc cggacacggc tgctcgcagc cgccgatttc ggtgcaggcg
     2761 aggttgccgt cgtcacaact gcacgtgttg cagctcacgg ggtcggcaat gttgtgatcc
     2821 ccgtcggcgt aaaccacacc cgcgaccttg cagcttcggc ctgaaccggg cggcacgcct
     2881 tcacaacgcc ccgcgtccga gcagcggccg cggacggggc cgagacaagc gccgcacacg
     2941 ttgccggatc gacaggctcg gtcctcgtaa gcgctctgcg cttcagccat ccgcatcatg
     3001 gcatcggggt gtgctgggtt cacgaaagcg tcgcagccac acgcgagtcc gacttggagc
     3061 ttttgcgtgc actcgtcggt gggcgcaccc gggtcgcact gcacggcttc ctcgtacgcc
     3121 gtcgagtagt cgtcgactaa gtccgtgcag cttcggccga tgcttgcgcc tgcttcgcct
     3181 ccgctaccgc cggtaaagcc tccgctaccg cccggggagc ctccgctgcc agcgctagct
     3241 ccaccggtac cgggcgcgct gcctcccatg cccgcggtca cgccggccgt gccgccctcc
     3301 gcgccgccgg tgccggcagt tccccctgca gttgcggcgc tgccgcccgt tgccgcgctc
     3361 gcaccggcag tcgtgccgcc ggctccactg ctcgcccccg agccgccgtg tcccccgtcc
     3421 gttgcggcat cgtgcttgtc cgaccgccct ccacaccccg agacgagggc cagcaccgtc
     3481 gcgagtaagc aaagggaact ggatctacgc atgttcggtc gaacctcgca taggaccgtc
     3541 gaaagcaaga gtcctgccgc caacgttcac ccgcaaatcg cggcgatcct gctggcgcag
     3601 gctggcacag ggccggcaac catgtcagcc gcgcccgagg gctcgggggt ctgccgtccg
     3661 ccgcgcgact gggttagggt gagcgcccga tgccctcgcg gaccccactc ggagccgtcg
     3721 gtctcagggt ctataacgcg ctctactggc cgtatctcgc gctcacgtgc gtgattttct
     3781 tcgtgcccgc gctcgcgatt tgggcgctca cgctatggga cccgaaaaag cgactgctcc
     3841 atgcgttcac gagcttttgg ggcgcgcact acctcgcttg ggcgccgttt gcgtcggtga
     3901 aggtgttcaa tcgggatgtg ggcctgcgtg cggggccgtg cgtgtacgtg tcgaaccatc
     3961 agtcgatggt cgatatcctc gccgtgttcg cgacgtacct gccgtatcgc tgggtcagca
     4021 agcgcgcgaa cttctttgcg ccgtttctcg gttggacgat gtggctgaac gggtacgtgc
     4081 cgctcaagcg cggtcacctg ccgagcatcc gccgcatgct gcgccgctgc gaagccgagc
     4141 tccgcgccgg caatagcttg ttcctgtttc ccgaggggac gcgctcggac gacggcgagc
     4201 tcaaggcgtt ctaccgcggc gcattttggt tggcccttcg ccacggcgtc cccgtcgtgc
     4261 cggtcgtgat cgaaggcacg cggcacatcc tgccgaaacg gagcctcttg attcgcccgc
     4321 aggaggtgca cgttcgcgtg ttgccgccgg tcgacgccgc ggccttcggg cgggacgacc
     4381 gggccctgag ggaagccgtg cacgagcgga tgtccgaagg cctcgcggag ctccggcgga
     4441 gctttaaggc cgtgggcttg gcgtcgaccg aggctcatgc tagttcgcgc gccacgccgg
     4501 ctaaggccgg tgacccgagg agcgcatgag cacccaaggc aagatcatcc aagtcatcgg
     4561 tccggtcgtc gacgtcgaat tccccccggg gaagctgccg accattttga acgcgctgac
     4621 gctcacgaac cccaacatct cgagcgagaa ggacaacctc gtgctcgagg tggctcagca
     4681 cctcggcgag tcggtcgtgc gcgccatcgc gatggatacg acggaaggtc tcgtccgcgg
     4741 catgctggtg agcgacaccg gctccccgat catgatgccc gtcggcaagg cgacgctcgg
     4801 tcgcatcctc aacgtcacgg gcaaaccgat cgacgagaag ggccccgtca acgcggaacg
     4861 ccgcctgccg atccaccgtc cggcccccgg tttcgtcgat cagaaccc
//
LOCUS       DATIML010001357         2322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3751718, whole genome shotgun sequence.
ACCESSION   DATIML010001357 DATIML010000000
VERSION     DATIML010001357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3751718"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VLJ38_23390"
     CDS             <1..362
                     /locus_tag="VLJ38_23390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42555.1"
                     /translation="CVLVQTGTEVVAHYHLPRGAHGVVLRVAWFVPGRRGPTEGSLDV
                     PLAQGEERAVLPPIEAGAHVRGALGIELEGAFKPLAVAWVYRVSEARVSVAFAAPGEP
                     PVTLRAQLGRAVADLLV"
     gene            359..1411
                     /locus_tag="VLJ38_23395"
     CDS             359..1411
                     /locus_tag="VLJ38_23395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42556.1"
                     /translation="MKRILGGSLLAAGVLVAARGFAEPPVAPARTDALGRTGDASVSV
                     GVLREQSDVRSDTAGFLRLQFPLDRTVAPRRALVASADDASYPVLESDVQDSVTDDED
                     ERDGSVAPALNPALLGRLARDALAAAQNAHGAVAFAREVDSAATRARTSAVLPEIRLR
                     AVRSRDAALHLTPTVDDPYHSTFADGDGVLLEAQATFRLNRLIFADEEVPLERLRIER
                     ERVNERLEARVLARLVAWHRALSHEWSAPDPETRGRAALARIDAELELDALTDGWFGE
                     RARRLGLDVPPVERRAPPPKTPAPPKPATKSKDKPSAVSGMADLEGCSGSATSAVPCL
                     PTRVTDSRTFKGASMR"
     gene            1354..2322
                     /gene="prfB"
                     /locus_tag="VLJ38_23400"
                     /pseudo
     CDS             1354..2322
                     /gene="prfB"
                     /locus_tag="VLJ38_23400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_146649532.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
BASE COUNT          376 a          774 c          837 g          335 t
ORIGIN      
        1 tgtgcgtgct cgtgcaaacg gggacggagg tcgtagcgca ctaccatttg ccgcgcgggg
       61 cgcacggggt cgtcctgcgc gtggcgtggt tcgttccggg acgccgcggt ccgaccgagg
      121 gctctctcga cgtgccgctc gcgcagggcg aagagcgcgc ggtcttgccg ccgatcgaag
      181 cgggggccca cgtgcggggc gcgctcggca tcgagctcga aggggcgttc aagccgctcg
      241 cggtcgcctg ggtgtatcgc gtgagtgagg ctcgggtttc ggtggctttc gctgcgcctg
      301 gcgagccgcc tgtgacgctt cgcgcgcaac tcggtcgtgc ggtggccgac ttgctcgtgt
      361 gaagagaatt ctcggcgggt cgctgcttgc ggccggcgtc ttggtcgcgg cgcgcgggtt
      421 cgcggagccg cccgtcgcgc cggcgcgcac cgacgcgctc ggacgcacgg gggacgcgag
      481 cgtttcagtg ggtgtcttgc gcgagcagag cgacgtgcgc tcggacacgg cgggctttct
      541 gcggctacag tttccgctcg atcgcaccgt ggcaccgcgc cgggcgctcg tcgcgtcggc
      601 ggacgacgcg agttaccccg tgctggagag cgacgtccag gacagcgtga cggacgacga
      661 ggacgagcgg gacggcagcg tcgctcccgc gctcaatccc gccctgctcg gtcgcttggc
      721 gcgcgacgcg ctcgccgccg cacagaacgc gcacggcgcc gtggcgttcg cgcgcgaggt
      781 ggacagcgcc gcgacgcgcg cgcggacgag cgccgtgttg cccgagatcc ggctgcgcgc
      841 cgtgcgctcg cgcgacgcgg cgctccatct gacgcccacg gtggacgacc cgtaccattc
      901 gacgttcgcg gacggtgacg gcgtgctgct cgaagcgcag gcgacgtttc gcttgaaccg
      961 gctcattttc gccgacgagg aagtgccgct cgagcggctg cgcatcgagc gcgaacgagt
     1021 gaacgagcgg ctcgaagccc gcgtgctcgc gcggctggtg gcctggcatc gcgccctgtc
     1081 gcacgaatgg agcgcgccgg accccgagac ccgggggcgc gccgcgctcg cgcgcatcga
     1141 cgccgagctc gagctcgacg cgctcactga cggctggttc ggcgagcgcg cgcgccggct
     1201 cggcctcgat gtgccacccg tggaacggcg cgccccgccg ccgaaaaccc ccgcgccacc
     1261 caagcccgcc acaaaatcaa aagacaagcc gtccgccgtg tccggcatgg ccgacttgga
     1321 gggatgctcg gggtctgcta catcggccgt gccatgcttg ccgacgcgcg taacggactc
     1381 caggaccttc aaaggcgcgt cgatgcgcta agggggtctc tttgacgtcc ccggtcttcg
     1441 ccgcctgatt gaagagctcg atcagctcgg cgccgagccg ggtttctggg aaaaccagga
     1501 aaaggcgcag gcgcagatgc gcaagcgctc cgccgcgacc gaaaagctcg agctcatcga
     1561 gaagctcacg cgcgacgtga acgacgcgag cgagctgctc gagctcggcg cgtccgaaaa
     1621 cgatcagagc gtcatcgccg acgtggaggc gcagctgccc gcgctcgaag cgcgcgttcg
     1681 ccaggccgag ctccggcgca tgctgtcggg ccccgtcgat cacgccaatg cgatcgtgag
     1741 cattcatccg ggcacgggcg gcaccgacgc caaggactgg gcggagatgc tgctccgtat
     1801 gtacctgcgc tggtgcgagc gtcacgggta caagaccgag atcatcgatt atcaggcgag
     1861 cgacgaagcc ggcatcgacg gcgcgtcgtt cacggtgcag gggccgaacg cttacggcta
     1921 cctccacgcc gaggtcggcg tgcaccggct cgtgcgcatc agtccgttcg acgcgaacgc
     1981 gcggcgccag acgagctttg ccgcgttcga ggtcacgccc gacatcgaaa acgagatcaa
     2041 catcgaggtc aaagacgtag acctcgaagt gacgaccatg cgcgccggtg gcaagggcgg
     2101 ccagaacgtg aacaaggtcg aaacggccgt gcgcatgaag cacttgccga gcggtatcgt
     2161 gatcgtgtgt cgcgccgagc gcagccagca tcaaaaccgc gccatggcgc tcaagatgct
     2221 gaaggcgcgc ctgttcgagc tcgaagaggc gcggcgcgag gaagagcagg cacgctacga
     2281 agccgccaag ggccaaatcg cctggggtaa ccagatccga ag
//
LOCUS       DATIML010001358         2353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4908819, whole genome shotgun sequence.
ACCESSION   DATIML010001358 DATIML010000000
VERSION     DATIML010001358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4908819"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            332..952
                     /locus_tag="VLJ38_23405"
     CDS             332..952
                     /locus_tag="VLJ38_23405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42557.1"
                     /translation="MRADLDLSADVSAFFASLVGEAAEERRVEATGATRAYVSGLLAD
                     YAKPGALTRDALERPVTLLLAEALESVGRERFERLRALGDGTLYVCGFFAEHLENRGV
                     ALRYVESVGAQAYDGAAHMLRQSGLTGGDASSAPDVFGELAAHFDSFVRLIESIADRL
                     VAQSGGGTPSNTVRLYERWLRTGSDEIATVLGARGLVPQRGGGGVH"
     gene            953..1543
                     /locus_tag="VLJ38_23410"
     CDS             953..1543
                     /locus_tag="VLJ38_23410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42558.1"
                     /translation="MPRPRLGRRTKVALKSIQRRLEAYYGLECTPDVTAFAAAAPTGE
                     REQLLVRESPDTIELALIVPADLPRAGANDTWLQLVEGVSHFVYVAERVRTELPTTQL
                     ELELQAEIDKFVLLGLEPGKDHQSVRRLHEHLYEHGHFLDPRGSEAGERYRLANDLAA
                     RLSARLLGRHAHDARALLQRFYRAGQTDKIALATAA"
     gene            complement(1547..>2353)
                     /locus_tag="VLJ38_23415"
     CDS             complement(1547..>2353)
                     /locus_tag="VLJ38_23415"
                     /inference="COORDINATES: protein motif:HMM:NF016032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HSU42559.1"
                     /translation="SEEDAIRKLVVSLRLSPLLHALTANAPFAERRVSSFKSLRGDVW
                     LHMDPARSGLIPPFWRKERASYRDYVEWALDAGMFLFKREERVYKNTGQTFRAFLADG
                     FEGERATLEDWRVHLNTLFPEVRLKSTLELRACDAQSRELTLAVLALFTGLLYDERAL
                     ADAEVMARRFELDTLEAARPALVRDGLAARIGSDPAAALAERLVDIALGGLERRALAD
                     GEGRDERRYLEPLAELVLHGKCPADALLDGLSPGEILGIPEIIARTRLLR"
BASE COUNT          409 a          783 c          802 g          359 t
ORIGIN      
        1 ccatatcaaa cctcgtaact tgggttggtg ggtcttcgtg gactcgacgg tgcccgtctg
       61 gaacccgcta aaccccacta aagtcccgaa accacggaac tttgcgctag ttagcactca
      121 acacacgaga gtgctagcag gcgcacggga aggtaggccg ggatgcggcc ctgtcaaggc
      181 cacgtcctcc agaaaaacag gatcgaggcg gtaacctgct ggcagcgcat cacgccgagt
      241 gccaagaaag aacgaccacc tgctcatccg cgcagctgtt tcgttacatt tcggcaacga
      301 gccggccgta catttgcatg agaggtcctt catgcgagcc gatctcgatc tgtcagccga
      361 cgtgagcgcg ttcttcgcca gcctcgtcgg tgaagccgcc gaggagcgaa gggtcgaagc
      421 aacgggcgcg acgcgagcct acgtgtcggg cctgctggcc gattatgcca agccgggtgc
      481 actgacgcgt gatgcactgg agcgcccggt gacgttactt ctcgccgagg cgctcgagag
      541 cgtcgggcgg gagcgcttcg agcggctgag agcgctgggc gacggcacgc tgtacgtctg
      601 cgggttcttc gccgagcact tggagaaccg cggcgtggca ctgcgctatg tcgagtccgt
      661 gggcgcccaa gcgtacgacg gtgcggcgca catgctgcgc caatcggggc tcacgggcgg
      721 cgacgcgagc tcggcgccgg acgtcttcgg tgagctcgcc gcgcacttcg attccttcgt
      781 gcggctgatc gagagcatcg ccgaccggct ggtggcgcaa agcggcggcg gcacaccgag
      841 caacaccgtg cggctctacg agcgctggct acgcacgggc tccgacgaaa tcgccaccgt
      901 gctgggcgcg cgcggcctcg tgccacagcg gggcggcggc ggagtgcact gaatgccaag
      961 accacgactc gggcgccgta ccaaggtcgc gctcaagagc atccagcgcc gtttggaagc
     1021 ttattacggc ctcgaatgca cgcccgacgt gacggcgttc gccgcagcgg cgcccacggg
     1081 cgagcgcgag cagctgctcg tgcgtgagtc gccggacacg atcgagctcg ccctgatcgt
     1141 gccggcggac ttgccgcgcg cgggcgcgaa cgacacctgg ctgcagctcg tcgaaggcgt
     1201 gagccacttc gtctacgtcg ccgaacgcgt gcgcaccgag ctgcccacga cgcagctcga
     1261 gctcgagctg caagccgaga tcgacaagtt cgtgctgctc ggcctcgagc ccggtaaaga
     1321 ccaccagagc gtgcgccgcc tgcacgagca cctctacgag cacggtcact tcctcgatcc
     1381 gcgcggcagc gaagccggcg agcgctaccg cctcgccaac gatctcgcgg cacggctgag
     1441 cgcgcgcctg ctcggccgcc acgcgcatga cgcgcgcgct ctcttgcagc gcttttaccg
     1501 cgccggacag accgacaaaa tcgcgctcgc gacggccgcg tgaaggtcag cggagcaagc
     1561 gcgtgcgcgc gatgatctcc ggaatgccca gaatttcgcc cggtgaaagg ccgtcgagca
     1621 gggcgtcggc cggacacttg ccgtgcagga cgagctcggc gagcggctcg aggtaacggc
     1681 gttcgtcgcg gccctcgccg tcggcgagcg cgcggcgctc gagtccgccg agcgcgatgt
     1741 cgacgagccg ttcggcgagc gcggcggcgg ggtcggagcc gatgcgggcc gcgagcccgt
     1801 cgcgcacgag cgccggccgc gccgcttcca gcgtgtcgag ttcgaacctc cgggccatga
     1861 cctcggcgtc ggcaagcgcg cgttcgtcgt agagcaagcc cgtgaagagc gcgagcacgg
     1921 cgagggtgag ctcgcgtgac tgcgcgtcgc aggcccggag ctcgagcgta cttttgagcc
     1981 gcacctcggg aaagagcgtg ttcaagtgca cgcgccagtc ctcgagcgtc gcgcgctcgc
     2041 cctcgaagcc gtcggcgaga aaggcgcgaa aggtttggcc cgtgttcttg tagacgcgct
     2101 cttcgcgttt gaataggaac atgcctgcgt cgagcgccca ctcgacgtag tcgcgatacg
     2161 acgcgcgttc cttgcgccaa aacggcggga tcaagccgga ccgcgccgga tccatgtgca
     2221 gccaaacgtc cccgcgcaga ctcttgaacg agctcacgcg ccgctcggcg aaaggcgcgt
     2281 tcgccgtcag ggcgtgcaag agcgggctca gtcgcaacga aacgacgagc tttctgatgg
     2341 catcttcttc act
//
LOCUS       DATIML010001359         7371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_3753627, whole genome shotgun sequence.
ACCESSION   DATIML010001359 DATIML010000000
VERSION     DATIML010001359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 7371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7371
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3753627"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="VLJ38_23420"
     CDS             <1..197
                     /locus_tag="VLJ38_23420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42560.1"
                     /translation="AAMLQAGYQIGLSSNTGSNPLSGPVDRFNIRRQAVGLNLSEAYL
                     LAMLTLPSLAHKHPGQLAAP"
     gene            complement(208..1872)
                     /locus_tag="VLJ38_23425"
     CDS             complement(208..1872)
                     /locus_tag="VLJ38_23425"
                     /EC_number="2.7.7.65"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
                     /protein_id="HSU42561.1"
                     /translation="MPSERLRLPAPVRAMLLTAVTIFATEACITRWVDSPLALAGWQS
                     GLLDAGLLVVVTLPVIYFAWFRPLRRELDWHVRAAVSLEAHALSDALTALPNRVAFLE
                     LIQKELASTDPAPAAFTIAVLDVRRFGEVNGALGHESGDLLLKLIGERLRSGRVTHGV
                     AARLESDLFAVLFSDVDLVRAPAATERLHELVEIPFSLGDAPIQIEVHTGFAAFPQHG
                     DTPHVLLQRAELALTRAKKHGERGQGYREESESEARRRLALVRSLRAAIDRGGLSLVY
                     QPKLALEGGQFAGVEALARWNDPELGFVSPGEFVPLAEQTNLIRPLTLWVLREAIRQM
                     AAWKSAGLDVPVSVNLSARNLVDETLPDRVKELLQEWDIEPRFLMLEVTESAVLADPE
                     RAGNVIERFQKCGILLSIDDFGTGYSSLTYVRTMPATELKIDRSFVKGLESSESNMAI
                     VRAVIGLAHSLGMKVVCEGVETEAALLRLRELGCDFAQGYLLSRPLPAREIIDYVAKS
                     AFRVFGNPYDSRANEARPPRLSLLPRQSRPPLKDSLRAIRARSSPS"
     gene            2115..2390
                     /locus_tag="VLJ38_23430"
     CDS             2115..2390
                     /locus_tag="VLJ38_23430"
                     /inference="COORDINATES: protein motif:HMM:TIGR01552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HSU42562.1"
                     /translation="MLRKQTARLSRAAAGLLLAPALGVRHSMKSLPIPVADARNNFSD
                     IVAQARNGQRIKLTRHGKNVAWIVGSADREALKTRPGARRRKRDTSR"
     gene            2490..3365
                     /locus_tag="VLJ38_23435"
     CDS             2490..3365
                     /locus_tag="VLJ38_23435"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSU42563.1"
                     /translation="MLLADRTVLLLDADGALLDQLGSELKRHGARCFLARDAGTASFG
                     ARETLPDAMVCGLELPGVDTVSLVAELRSAPESTALPVVALLSAGQASTAASSMVSAG
                     AASGFQKCLPKPVNVPDLVDALCCVLGERTRPVLGSVPSAELIDELVVQHDFRRLLAV
                     LNASTAHRYSALFRRDGAELQSVWTFDREQPESDPMAVRLPIDATPCATLFATKCSHA
                     VDDATCDPNIAPAQRHALMRSFVGTPLVGFDTLIFGALCHFSPEPRRRDEQALDRLER
                     VAQVLSQGERRRRPR"
     gene            3600..4799
                     /locus_tag="VLJ38_23440"
     CDS             3600..4799
                     /locus_tag="VLJ38_23440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HSU42564.1"
                     /translation="MSGRSAVNGGSNAGGSTGTSPNTGGTGITISVGESGAAGADDTG
                     SAGTAGAAGAPSLDPNEACALSTDTVEAIPSVLQLVIDTSGSMDWPPGWAPVTPDDSK
                     PPGATKWEITRDALRNAVDSLSDDITLGATFFPDTTEDDPDSLCLRNEVALPLGVLGA
                     AASKQRNAWSAALDPIVPHGATPTEGAYLFGLEQLDKTESPGNRFLLLITDGTPTCTL
                     DCECTEDNLPVDSGPLIDDAATALAQGIRTFVIGSPGSEDTRPLLSALARKGGTAPSD
                     CSDDGPVYCHLDMTTEPDLAKGLASALDQVAASLRSCQYPIPTPSNLRTLDPNLVNVL
                     FTPSNGKTQTIGRDPSKAACNEGWQYSPDGSSILLCGDACEAAKQDVGAKVEILFGCR
                     TVMVEPR"
     gene            4885..5415
                     /locus_tag="VLJ38_23445"
     CDS             4885..5415
                     /locus_tag="VLJ38_23445"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HSU42565.1"
                     /translation="MSKAFTKDDAQGEPLLVPRRAPLPAGVPNYVTPGGLALLRAEFV
                     ELTAELLQVRAASAESDPERARMAAALGERLAELEARIGSAELVTARDDQPNAVRFGA
                     RVTVRNPAGALRTYRIVGVDEANASEGRIAFVAPLARALLGKRAGEAALVRTPQGEEE
                     LELVGFEYDTPSTDER"
     gene            complement(5447..5818)
                     /locus_tag="VLJ38_23450"
     CDS             complement(5447..5818)
                     /locus_tag="VLJ38_23450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42566.1"
                     /translation="MGASAGTSAAAGTGTGGTSGAGPAGGRASFGFGGATGGRNTGGR
                     STGGRNTGGRNNGFGGQSGSGQQTGGATSGGRGGSGGRAGGGGRSGSGGRSGSSGTAG
                     QVSTAGQTGEAGAGAGGQGGA"
     gene            6230..6784
                     /locus_tag="VLJ38_23455"
     CDS             6230..6784
                     /locus_tag="VLJ38_23455"
                     /inference="COORDINATES: protein motif:HMM:NF013340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HSU42567.1"
                     /translation="MTLSHRVARIAGEALAPVRAGTERLASRRFDLAVPKLSVTSDWF
                     EDGAPLPARCTVDGEGVPPPLRWSEPPPQARELVLICEDPDAPLAEPFVHWLVYDIQA
                     EARTLDAVSATHARVGQNSKLDLAFAPAAPPPGHGQHHYHFQLFALDAPLALDRGEGR
                     TKVLEAMEGHVIAYGELVGTFTRA"
     gene            complement(6771..>7371)
                     /locus_tag="VLJ38_23460"
     CDS             complement(6771..>7371)
                     /locus_tag="VLJ38_23460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSU42568.1"
                     /translation="LDLVSGRVDATHPLCSWLLAQGVPEASLREFHEAPLALDAIGIN
                     AYPLLSLKVLSRLRGRSRVTTPYAGPEIIEQLAALYYTRYGRPLVLSETASDGSVERR
                     AAWLESSVAAVARARACGVPIVGYTWWPLFARVAWAYRQGSRPIASYLKQMGLWDLSP
                     GKRGLERVRTRLVERYRELAASGTAAVGPLGRDLTATRA"
BASE COUNT         1251 a         2585 c         2400 g         1135 t
ORIGIN      
        1 gcgcggccat gctgcaggct ggctaccaaa tcggcttgag cagcaacacg ggctccaatc
       61 ccctgagcgg ccccgtggac cgcttcaaca tccggcggca agccgtgggc ttgaacctct
      121 cggaagcgta cctgctcgcg atgctcacgc tgccgtcgct cgcgcacaaa catcccggcc
      181 aactcgcggc accgtgacga ttcggcctca gctcggcgat gagcgcgcac ggatcgcgcg
      241 cagcgagtcc ttgagcgggg gccgagactg gcgcggcaag agcgatagcc gtggaggccg
      301 cgcctcgttc gcgcgcgagt cgtaggggtt gccgaagacg cggaacgcgc tcttggcgac
      361 gtagtcgatt atctcgcggg cgggcagcgg ccggctcaag aggtagcctt gggcaaaatc
      421 acaaccgagc tcgcgcaatc ggagaagcgc cgcctcggtt tcgacgccct cgcacacgac
      481 cttcatgccg agactgtgcg caagtccgat cacggcgcgc acgatggcca tgttgctctc
      541 gctcgactcg aggcccttga cgaacgagcg atcgatcttg agctccgtcg cgggcatggt
      601 gcgcacgtac gtgagagagc tataacccgt gccaaagtcg tcgatcgata gcaagatccc
      661 gcacttctga aagcgttcga tgacatttcc cgcccgttcc gggtcggcca gcaccgcgct
      721 ctcggtcact tcgagcatca ggaaacgcgg ctcgatgtcc cactcctgca agagctcctt
      781 cacgcgatcc ggcagcgtct cgtccaccag attgcgcgcg gacaggttga cggagacggg
      841 cacgtcgagc cccgcgctct tccaggcggc catctgtcga atggcttcgc gaagcaccca
      901 cagcgtgagc ggccgaatca aattcgtttg ttcggcgagc ggcacgaact cgcccggcga
      961 cacgaagccg agctcggggt cgttccagcg cgcgagcgcc tcgaccccgg caaattggcc
     1021 gccttcgagc gcgagcttcg gctggtacac gagcgagagc ccgccgcggt cgatcgccgc
     1081 acgcaaggag cgcacgagcg ccaagcgccg gcgcgcctcc gactcgctct cctcgcggta
     1141 accttggccg cgctcgccgt gcttcttcgc gcgcgtgagc gcgagctcgg cgcgctgcaa
     1201 gaggacgtgg ggcgtatcgc cgtgctgggg gaacgctgca aaccccgtgt gaacttcgat
     1261 ttgtatcggc gcatcgccga gcgagaacgg gatctcgacg agctcgtgca ggcgctcggt
     1321 ggcggccggt gcccggacca ggtctacgtc ggagaacaac acggcaaaga ggtcggactc
     1381 gaggcgagcg gcgacgccgt gcgtcacgcg cccgctgcgc agccgctcgc cgatgagctt
     1441 gagcaacagg tccccgctct cgtggccaag cgcgccgttc acctcgccga accgtcgcac
     1501 gtcgagcacg gcgatggtaa aggcagctgg tgcggggtcg gtgctagcga gctccttctg
     1561 aattagctcg agaaaggcga ctcggttcgg cagagccgtg agcgcgtccg acagcgcgtg
     1621 agcctccagt gacaccgccg cgcgcacgtg ccagtcgagc tcgcgccgga gcggccggaa
     1681 ccaggcgaaa tagatcaccg ggagcgtcac aaccacgagc aggccggcat cgaggagtcc
     1741 ggactgccat ccggcgagcg ccaggggcga atctacccaa cgggtgatgc aagcctcggt
     1801 cgcaaagata gtgacggcgg tgaggagcat ggcgcgcacc ggcgctggta gccgcaggcg
     1861 ttcgctgggc atcgcacctg ctctcacctc gagactccgc tcctgcgcct gcccggcagt
     1921 acgtcatcgt aaaaagcgtt cgtcctaccc atgctcgctc ggggccgtta cgcacatgaa
     1981 cggacgcttc cgccccgagg taagccgaca ggcgcgtggc ccagctcgga aacgtattgt
     2041 ttctttcgag ccgaagctcc cacgccgagg gggtgctcgc tccaaatcgc ctcaggggtg
     2101 cgcttcgccc gcgggtgctc cgcaagcaaa ccgcgcgatt gtcgcgtgcc gccgctggcc
     2161 tccttcttgc tccggccttg ggcgtgagac acagcatgaa aagccttccg attccggtgg
     2221 ccgacgcgcg caacaacttc tccgacatcg tggcgcaagc gcgcaatggc cagcgcatca
     2281 aactgacgcg tcacggcaag aacgttgctt ggattgtcgg ctcagccgat cgggaggcgt
     2341 tgaaaacgcg ccccggtgcc cgccggcgca agcgcgacac ttcgcgctga cggcagcccc
     2401 tgtggccgca gtgcgagcag aggagccgtc gcaacttttg tacaatattt gatggaggca
     2461 ctctgccgcg cgagcgtccg cggataccca tgcttttggc cgaccgcacg gtgctgctgc
     2521 tagacgcgga cggcgccctc ctcgatcagc ttggttcgga gctcaagcgg cacggtgcca
     2581 gatgctttct cgcacgcgac gcgggtacag cgtcctttgg cgcgcgtgaa accctgccgg
     2641 acgccatggt ctgcgggctc gagctgccgg gcgtcgacac ggtgtctctg gtcgcggagc
     2701 tccgtagcgc accggagtcg accgccttac ccgtggtggc gttgctctcc gcgggtcagg
     2761 ccagcacggc ggcgagctcc atggtttccg ccggcgcagc gtcgggcttt caaaaatgcc
     2821 tgccgaagcc cgtcaatgtg cccgatctcg tcgacgcgct ctgctgcgtg ctcggcgaac
     2881 gcacccggcc cgtgctcggc agcgtgccgt cagcggagct catcgacgag ctcgtcgtgc
     2941 agcacgactt tcgtcgattg ctcgcggtct tgaacgcctc gaccgcgcac cggtattcgg
     3001 ccttgtttcg ccgcgacggc gcggagctcc agagcgtgtg gaccttcgat cgcgaacagc
     3061 ccgaaagcga tcccatggcc gtgcgcctgc cgatcgacgc aaccccatgc gccacgcttt
     3121 tcgcgacgaa gtgctctcac gccgtcgatg acgccacctg cgatccgaac atcgcgcccg
     3181 cgcaacgcca cgcactgatg cgctccttcg tgggaacccc gctcgtcggg ttcgatacgc
     3241 tcattttcgg cgcgctgtgc catttcagtc ccgaaccacg ccggcgcgac gaacaggcgc
     3301 tcgatcgcct ggagcgcgtg gcgcaagtgc tgagccaggg cgagcggcgt cgtcggccaa
     3361 ggtgatgccc gcacggctcg ctacccgagg caactcgccc cagctcgggt tggcgcgcag
     3421 catgcttcac cccacgtatg ctgcagccca cgcgcacgca tcgttcgagc ttgcgatacc
     3481 tgacagcgct tgccgccggg tcgctcgtcg cagttagtgt agcgccggcc tgtacgagct
     3541 cgtccggccc cggtgggagc gcgggcggaa gcggcggcgc ggcaaccggc ggaagcagcg
     3601 tgagcggccg gagcgcggtg aacggcggct cgaacgcggg cggcagcacc gggacgagcc
     3661 ccaataccgg cggcaccggc atcacgattt ccgtgggaga gagcggcgct gcaggcgcgg
     3721 acgacacggg ctcggccggg acggccggag cagccggcgc gccatcgctc gatccaaacg
     3781 aggcgtgcgc gctcagcacg gataccgtcg aagcgatacc gtcggtgtta cagctcgtca
     3841 tcgatacgag cggctcgatg gattggccgc ctggttgggc gccggtgact ccggacgatt
     3901 ccaagccgcc cggcgcgacg aagtgggaga tcacgcgcga cgcgctacgc aacgccgttg
     3961 actcgctctc ggacgacatc acgctcggcg cgacgttctt tcccgatacg accgaagacg
     4021 accccgacag cctgtgcctc agaaacgagg ttgcgctgcc gctcggcgtc ctgggcgcgg
     4081 cggcgtccaa gcagcggaat gcgtggtccg cggccctcga ccccatcgtc ccccacggcg
     4141 cgacgccgac cgaaggagcg tacctgttcg gcctcgaaca actcgataag accgagtcgc
     4201 cgggcaatcg gttcctgctg ctcatcaccg acggaacccc gacctgcacg ctcgattgcg
     4261 agtgtacgga agataacctt cccgtagact cggggccgct catcgacgac gccgcaacgg
     4321 cgctcgccca agggattcgc accttcgtca ttggctcgcc cggcagtgaa gacacgcgcc
     4381 ccctcctttc ggcgctcgcg cgcaagggcg gcacggcccc gtccgactgc tccgacgacg
     4441 gcccagtcta ctgccacctc gacatgacga cggagcccga cctcgccaaa gggctcgcct
     4501 ccgcgctcga tcaagtcgcg gcgagcctcc gctcgtgcca atacccgatt cccacgccgt
     4561 ccaacctgcg taccctcgat ccaaacctcg tgaacgtcct cttcactccg agcaacggca
     4621 aaacccaaac catcggccgc gatccctcga aagctgcctg caacgaaggc tggcaatact
     4681 ctcccgacgg gagcagcatt ctcctctgtg gcgacgcatg cgaggcggcc aaacaagacg
     4741 tcggagcgaa agtcgaaatc ctctttggct gtcgcaccgt gatggtcgag ccacgctgag
     4801 agccagcgtg gccaccgtga cgaccccgac gccggtgtca tcacccgcgt cctcacgcgg
     4861 cgcagcaaac gcgcagggca gtccgtgagc aaggcgttca cgaaggatga cgctcagggt
     4921 gagcctctgc tcgtgccgcg gcgcgcgccg ttgcccgccg gagtaccgaa ctacgtcacg
     4981 cccggtggac tcgctctgct gcgcgccgag ttcgtcgagc tcactgcgga gctcttgcag
     5041 gtgcgggccg cgagcgcaga gtcggacccc gagcgcgcca ggatggcggc ggcgctcggt
     5101 gaacgtttgg ccgagctcga agcacgcatt gggtcagcgg agctcgtgac ggcacgcgac
     5161 gaccagccga atgcagtgcg cttcggcgcg cgcgtcacgg tgcgaaatcc tgcgggcgcg
     5221 ctgcgcacgt atcggatcgt cggcgtcgac gaagcaaacg cgagcgaggg tcgcattgcc
     5281 ttcgtagcgc cgctcgcccg ggcattgcta ggcaaacgcg cgggcgaagc ggcgctcgtg
     5341 cgcacgcctc aaggcgaaga agagctcgag ctagtcgggt tcgagtacga cacgcccagc
     5401 accgacgagc gctgaaacgc gaaggccgag cgctgccgag tcgctctcag gcgccgcctt
     5461 ggcccccggc gccggcaccg gcctcgcccg tttgtccggc cgtcgatact tggcccgcgg
     5521 tgccgctgct gccgctgcga ccgccgctcc cgctgcgacc gccgccgccc gcgcgaccac
     5581 cgctgccgcc gcggccgccg gaagtggcac cgcccgtctg ctgcccgctg ccgctctgtc
     5641 caccgaagcc gttgttgcgg ccgcccgtgt tgcgaccgcc agtgctgcga ccgccagtgt
     5701 tgcggccgcc agtggcgcct ccgaagccga agctggcgcg accgcccgcg gggcctgcgc
     5761 cggatgtgcc accggtaccg gttcccgctg ccgcactcgt gccggctgac gcacccatgc
     5821 cgcccttacc agcgctagcg cccttccccg cgctgctggt gcccgcggag ccgcccttgc
     5881 cgctgctacc ggatttacct gcagtgtgtc caggagagga tgagtcgtcg tcaccgccgc
     5941 acgcggttgc aacgcagacg cctgccgcca ggaaaagacc aacgctcgtt cgggaaaaag
     6001 ccatattcga aaatcctcgc ttgccgcgtc gtacgcgcgg accaccgtgt atcatttaca
     6061 cctcggagtt ggtaaccaat ccgcgtccct tctgtcccgg cactacaagt atttggcgcc
     6121 cgccggccaa cggcgaccag aagagccccc aaaataggct gagatttcgc gcaagaccgc
     6181 gcggaccgcg tctgggcact gcggtacgcg acttgctcgt tggatgagca tgaccctctc
     6241 tcatcgagtg gcgcgtattg ccggcgaagc gcttgcgccc gtgcgcgccg gaacggaacg
     6301 gctcgcgtcg cggcgcttcg acctggccgt tcccaaactg tccgtcacga gcgactggtt
     6361 cgaagacggc gcgccgttac cggcgcgctg cacggtcgac ggagaaggcg tgcctccgcc
     6421 tttacgctgg agtgaaccgc ccccgcaagc gcgagagctc gtgctgatct gcgaagatcc
     6481 cgacgccccg ctcgcggagc ccttcgtgca ctggctcgtc tacgacatcc aagcagaagc
     6541 acgcacgctc gacgcagtaa gcgccacgca cgcgcgcgtg ggccaaaata gtaagctcga
     6601 cctcgccttc gcacccgcgg cgccaccgcc aggtcacggt cagcatcact accactttca
     6661 actcttcgcg ctcgacgcgc cgctcgcgct cgaccggggc gaagggagaa ccaaggtgct
     6721 cgaggccatg gaaggccacg tcatcgccta cggtgagctc gtgggcacgt tcacgcgcgc
     6781 gtagcggtca gatcgcgtcc gaggggaccg acggccgccg tgccgctcgc ggcaagctcg
     6841 cgatagcgtt cgacgagccg agtgcgcacc cgctcgagtc cacgctttcc cggcgacaag
     6901 tcccagagtc ccatttgctt caagtacgaa gcgatggggc gggagccctg ccgataagcc
     6961 caagcgacgc gcgcgaagag cggccaccac gtgtaaccca cgatcgggac gccacacgct
     7021 cgggcgcgcg cgacggcggc gaccgacgac tcgagccatg ctgcgcgccg ctcgacgctg
     7081 ccgtcgctgg cggtttcgct cagcacgagc gggcgaccat agcgagtgta atagagcgcg
     7141 gcgagctgct cgatgatttc gggccccgcg tagggcgtcg tcacgcgtga acggccgcgc
     7201 agccgcgaaa gtaccttcag tgacagcagc ggataggcgt tgatcccgat ggcgtcgagc
     7261 gcgagcggcg cctcgtgaaa ctcacgtagc gacgcctcgg gcacgccttg cgcgaggagc
     7321 cacgaacaga ggggatgcgt tgcgtcgacg cggccgctca cgagatcgag c
//
LOCUS       DATIML010001360         3764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Polyangiaceae bacterium isolate SMAG_U15769
            k141_4619789, whole genome shotgun sequence.
ACCESSION   DATIML010001360 DATIML010000000
VERSION     DATIML010001360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936482
            Sequence Read Archive: SRR9650391
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Polyangiaceae bacterium (soil metagenome)
  ORGANISM  Polyangiaceae bacterium
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae.
REFERENCE   1  (bases 1 to 3764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:33:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,696
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 18
            tRNAs                             :: 16
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 6 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764
                     /organism="Polyangiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4619789"
                     /isolate="SMAG_U15769"
                     /isolation_source="soil"
                     /db_xref="taxon:2268199"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="37.89 N 123.48 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..985)
                     /locus_tag="VLJ38_23465"
     CDS             complement(107..985)
                     /locus_tag="VLJ38_23465"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HSU42569.1"
                     /translation="MIVVTTPTGQIGSALVKALLAAGEPVRVIGRDPEKIAPAVRDQI
                     ELVRGSSDDGAALDRALAGAESLFHVVPPFFGAPNVTEYYLRFTRAACEAMKRSGVTR
                     VVTVSGIGRRVETKAGVVTASLVKDVEFERAGLHVRALWCPGFMENMLREVRSLRAQG
                     AFFGMRRSDVKAPFVATRDIAASAARLLLDRSWTGAGGLAVLGPEDLSLDDIAAITAE
                     VCGRPIRYQRVPAAAYKAELLKHGASEDFAQGLLEMHEAKDLGLDSSEPRTPETTTPT
                     SYRTWCTEVLEPELLA"
     gene            1113..1742
                     /locus_tag="VLJ38_23470"
     CDS             1113..1742
                     /locus_tag="VLJ38_23470"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSU42570.1"
                     /translation="MARRGDELREHILGVAKGVFLELGFERASMDEVARRAQTSKRSV
                     YAHFENKEQLFLAVIELVRGLFLARLKVPGAYSAKPAEALVQFSARYLEVMLYEPAVQ
                     MIRVTLAESARFPDGAAQHFDVVFGAVTSRLSAYLKATFGLSPRASTEAAQRLLGQIL
                     FPIFPRALFGLEKLVAAFDERALAPEVDLRPVRRAVAELLDALPGAAGR"
     gene            complement(1739..2356)
                     /locus_tag="VLJ38_23475"
     CDS             complement(1739..2356)
                     /locus_tag="VLJ38_23475"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HSU42571.1"
                     /translation="MQLVFATTNPHKLREMRELLGAHGIDVRGLDTLGRAVAEPAETE
                     ASLEGNARLKATTYARALGRTCLADDSGLEVDALDGAPGVHSARYAGIGTTREERDQA
                     NRDKLLRELARRGPVSRKTRLVCVLCLADRAGHVLFEARGTLDAEVAPAPRGEHGFGY
                     DSLLLLPEVHKTVAELSPAELNARSHRGAAARALHAWLREHPLPP"
     gene            2425..>3764
                     /locus_tag="VLJ38_23480"
     CDS             2425..>3764
                     /locus_tag="VLJ38_23480"
                     /inference="COORDINATES: protein motif:HMM:NF013316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U32 family protein"
                     /protein_id="HSU42572.1"
                     /translation="MLAASLRRPEILAPAGTEEAFAAALASGADAVFFGLSEGFNARA
                     RSTAFSLATLPELVRRAHRAAAKVYLAVNTLVFESELGALEELLRGVVASGVDALIVQ
                     DPAVAFVARRLSPGIRLHASTQMTISSAEGALFAATLGVSRVVLPRELSADEIAAFTR
                     ESALESEVFVHGALCMSWSGQCLTSEAFSERSANRGQCSQACRMPYQAVVDGERLELG
                     DLRYLLSPEDLAAHDVLPELMQAGVHSLKIEGRYKGPAYVSAAVDSWRNWRDAVLRGV
                     TEADRARLERDIERTQLTFSRGGSLGFLRGDDHQRLVVATTPKHRGLALGDVREVRAW
                     SVVVKLTSQASVRELLRPGVGIKFELVGRSDAEHDPEHAPGGPLFSVRLLDGDCAELG
                     FGQPGPELARVRAGDAVRLTSDPELARQAERQGLRAVAGRVALELAVAGQAGEP"
BASE COUNT          542 a         1239 c         1360 g          623 t
ORIGIN      
        1 gaggcacagg acggaaccgg aaagattgat tttacgactg cgaccgtcgt gctcaaatga
       61 gcgtcgcgcg cgactcgctt gccccggcgc tcgcggctga gtccggttac gcgagcagtt
      121 ccggttcgag gacttccgtg caccaggttc ggtagctggt cggcgtcgtc gtttcgggcg
      181 tgcgtggttc gctgctgtcg agcccgaggt ctttggcttc gtgcatctcg agcaggccct
      241 gggcaaagtc ctcgctcgcg ccgtgcttca gcagctccgc cttgtaggcg gccgcgggca
      301 cgcgctgata ccggattggg cgcccgcaga cttcagccgt gatggcagcg atgtcgtcga
      361 gggacagatc ttcggggccg agcacggcga ggccacccgc gcccgtccaa ctgcgatcga
      421 ggagcaaacg cgcagcgctc gcggcgatgt cgcgcgttgc gacgaacggc gctttgacgt
      481 ccgagcgtct catgccgaaa aatgcgccct gggcgcggag cgaccgcacc tcgcgcagca
      541 tgttctccat gaagcccgga caccagagcg cgcggacgtg gagcccggcg cgctcgaact
      601 ccacgtcttt cacgagggaa gcagtcacga cgcccgcttt cgtttcgacg cgacggccga
      661 tgcccgaaac cgtgacgacg cgtgtgacgc cgctccgctt catcgcctcg cacgcggcgc
      721 gcgtgaagcg caagtagtac tcggtcacgt tcggcgcgcc gaagaacggc ggtacgacgt
      781 ggaagagact ctcggcgccc gcgagcgccc ggtcgagcgc cgccccgtcg tcactcgagc
      841 cgcgcacgag ctcgatctgg tcgcgcaccg cgggggcgat tttttcggga tcgcgcccga
      901 tgacgcgcac gggttcacct gcggcgagca gggctttcac gagcgcggag ccaatctggc
      961 cggtgggagt ggtgacgacg atcatgggga tctcctggcg ctgggcgcga ccgagcggcc
     1021 gctgtgacga cgataagtaa actataccgt accgtttact ttcgtcaagg cgcccgctgg
     1081 cgctgagcga agggacgcgc gaagatgctc cgatggcgag acgcggcgac gagcttcgcg
     1141 agcacatcct cggggtcgcc aagggtgtct tcctcgagct tggcttcgag cgcgcgtcga
     1201 tggacgaggt cgcgcggcgc gcgcagacct cgaagcgttc ggtctacgcg cacttcgaga
     1261 acaaggagca gctcttcctc gcggtgatcg agctcgtccg cgggctgttc ctcgcgcggc
     1321 tcaaggtgcc gggcgcgtac tcggcgaaac cggccgaagc gctcgtgcag ttttcggcgc
     1381 gttacctcga ggtcatgttg tacgagccgg ccgtgcagat gatccgcgtc actttggccg
     1441 agagcgcgcg ctttcccgac ggcgcagccc agcacttcga cgtggtgttc ggcgcggtca
     1501 cgagcaggct ctccgcttat ctgaaggcga ccttcggtct ctctccgcgc gcgagtacgg
     1561 aggccgcgca gcggcttttg gggcagatcc tcttcccgat tttccctcgc gcgctcttcg
     1621 ggctcgaaaa gctcgtcgcc gcgttcgacg agcgcgcgct cgcgcccgag gtcgatctga
     1681 ggccggtacg aagagcggtc gcggagctcc tcgacgcact gccgggcgcc gctgggcgct
     1741 agggcggcag cggatgctcg cgcagccagg cgtgaagcgc gcgggccgcg gcgccacggt
     1801 gggagcgcgc gttgagctcg gcgggcgaga gctccgccac cgttttgtgc acctcgggta
     1861 acagcagcaa gctgtcgtag ccgaagccgt gctcgccccg aggtgcgggc gcgacctcgg
     1921 catcgagcgt gccgcgcgct tcgaagagga cgtggcccgc gcggtcggcg aggcaaagca
     1981 cgcagaccag gcgcgtcttg cggctcaccg gaccacgccg cgcaagctcg cggaggagct
     2041 tgtcgcggtt ggcctggtcg cgttcttcgc gcgtcgtacc gataccggcg taacgagcgg
     2101 agtgaactcc cggcgctcca tcgagcgcgt ccacttcgag cccactgtcg tcggcgaggc
     2161 acgttcggcc gagcgcgcgc gcgtaggtcg ttgccttgag acgcgcattg ccttcgaggc
     2221 tggcttcggt ttcggcgggc tcggccacgg ctcgtccgag cgtgtcgagg ccgcgcacgt
     2281 cgatgccgtg cgctccgagt agttcgcgca tttctcggag tttgtgcggg ttcgtcgtgg
     2341 cgaagacgag ctgcatggcg caaggatgcc gtgagaagcg cgccgcgcca acgccgctcg
     2401 gcaattggtg ctaggagccg gccgatgctc gcggcttcgc tccgtcgccc cgaaattctc
     2461 gcgccggcgg gaacggagga ggcgttcgcg gcggcgctcg cgagcggcgc cgacgcggtg
     2521 ttcttcggac tctccgaggg gttcaacgcg cgggcgcgct cgacggcgtt cagcttggcg
     2581 accttgcccg agctcgttcg gcgggcccac cgcgcggccg ccaaggttta cctggccgtg
     2641 aacacgctcg tgttcgaaag cgagctaggc gcgctcgaag agctcctgcg cggcgtcgtg
     2701 gcgagcggcg tcgatgcgct catcgtgcaa gatcccgcgg tggcgttcgt cgcgcggcgg
     2761 ctttcgccgg ggattcggct gcacgcgagt acgcaaatga cgatttcgag cgcggaaggc
     2821 gcgctcttcg ccgcgacact cggcgtttcg cgcgtggtgc tgccgcgtga gctcagcgcc
     2881 gacgaaatcg cggcgttcac gcgtgagagc gcgctcgaga gcgaagtgtt cgtgcacggc
     2941 gcgctctgca tgtcgtggag cggtcaatgc ctcacgagcg aagcgttctc cgagcgctcg
     3001 gccaaccgag gccaatgttc gcaggcctgc cgcatgccgt atcaagccgt cgtcgacggc
     3061 gagcggctcg agctcggcga tttgcgctac ctgctcagtc ccgaagatct cgccgcgcac
     3121 gacgtgctgc cggagctgat gcaggcgggc gttcacagct tgaagatcga gggacgctac
     3181 aaggggcctg cctacgtgag cgcggcggtg gattcgtggc ggaactggcg cgacgccgtc
     3241 ttgcgcggcg tgaccgaggc ggaccgcgcg cggctcgaac gcgacatcga acgcacgcag
     3301 ctgacttttt ctcgcggcgg gtcgctcggt ttcttgcgcg gcgacgacca ccagcggctc
     3361 gtcgtcgcga cgacgcccaa gcaccgcgga ctggcgctcg gcgacgtgcg cgaggtccga
     3421 gcatggagtg tcgtcgtgaa gctcacgtcg caggcgagcg tgcgcgagct cctgcggccc
     3481 ggcgtgggca tcaaattcga gctcgtcggg cgcagcgacg ccgagcacga ccccgagcac
     3541 gcgccaggcg gtccgctctt cagcgtgcgg ctgctcgacg gcgattgcgc ggagctcggc
     3601 ttcggacagc ccggtccgga gctcgcgcgg gtgcgcgcgg gcgacgcggt ccggctgacg
     3661 agcgatcccg agctcgcccg gcaggccgag cggcagggcc tgcgagcggt cgccggccgg
     3721 gttgcgctcg agctcgccgt cgcaggacag gctggtgagc cctt
//
